SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 8116 8135 chr2L 9209 9231 6 1094 49.5 61.5 55.5 0.1 1115 chr2L 8116 exon CG11023 + chr2L 8674 3` UTR CG11023 + chr2L 9231 3` UTR CG11023 + chr2L_6_5001 chr2L_5001 RAL-849 2 chr2L 8113 8184 chr2L 9236 9277 7 1102 55.5 55.0 55.2 0.1 1164 chr2L 8113 exon CG11023 + chr2L 8695 3` UTR CG11023 + chr2L 9277 3` UTR CG11023 + chr2L_7_5001 chr2L_5001 RAL-849 3 chr2L 25328 25376 chr2L 25984 26032 7 656 30.0 33.5 31.8 0.2 704 chr2L 25328 intergenic Cda5 -,Ir21a - chr2L 25680 3` UTR Cda5 - chr2L 26032 3` UTR Cda5 - chr2L_7_25001 chr2L_25001 RAL-849 4 chr2L 47422 47481 chr2L 52577 52626 jockey 25 5153 13.5 10.5 12.0 1.9 5204 chr2L 47422 intron Cda5 - chr2L 50024 intron Cda5 - chr2L 52626 intron Cda5 - chr2L_25_50001 chr2L_50001 RAL-849 5 chr2L 63004 63068 chr2L 63139 63203 10 135 28.0 27.0 27.5 0.4 199 chr2L 63004 intron Cda5 - chr2L 63104 intron Cda5 - chr2L 63203 intron Cda5 - chr2L_10_60001 chr2L_60001 RAL-849 6 chr2L 65405 65448 chr2L 65529 65580 14 129 19.0 21.0 20.0 0.7 175 chr2L 65405 intergenic Cda5 - chr2L 65492 intergenic Cda5 - chr2L 65580 intergenic Cda5 -,CR45339 + chr2L_14_65001 chr2L_65001 RAL-849 7 chr2L 73742 73811 chr2L 73899 73969 9 153 32.0 27.0 29.5 0.3 227 chr2L 73742 intron,intron CR44987 -,galectin + chr2L 73856 intron galectin + chr2L 73969 intron galectin + chr2L_9_70001 chr2L_70001 RAL-849 8 chr2L 91144 91147 chr2L 91259 91259 4 118 29.5 22.0 25.8 0.1 115 chr2L 91144 intergenic not near genes chr2L 91202 intergenic not near genes chr2L 91259 intergenic not near genes chr2L_4_90001 chr2L_90001 RAL-849 9 chr2L 92523 92586 chr2L 92806 92869 13 283 26.5 21.0 23.8 0.5 346 chr2L 92523 intergenic not near genes chr2L 92696 intergenic not near genes chr2L 92869 intergenic not near genes chr2L_13_90001 chr2L_90001 RAL-849 10 chr2L 102467 102508 chr2L 106327 106368 8 3862 39.0 49.5 44.2 0.2 3901 chr2L 102467 exon CG11377 + chr2L 104418 3` UTR Nhe1 - chr2L 106368 exon Nhe1 - chr2L_8_100001 chr2L_100001 RAL-849 11 chr2L 119687 119759 chr2L 119814 119886 15 127 27.0 27.0 27.0 0.5 199 chr2L 119687 intron,intron CG11455 +,CG4822 - chr2L 119786 intron,intron CG11455 +,CG4822 - chr2L 119886 intron,exon CG11455 +,CG4822 - chr2L_15_115001 chr2L_115001 RAL-849 12 chr2L 127458 127475 chr2L 127603 127619 5 144 27.0 20.0 23.5 0.2 161 chr2L 127458 intron,intron CG11455 +,CG3164 - chr2L 127538 intron,intron CG11455 +,CG3164 - chr2L 127619 intron,intron CG11455 +,CG3164 - chr2L_5_125001 chr2L_125001 RAL-849 13 chr2L 127476 127521 chr2L 127595 127663 13 134 20.0 19.0 19.5 0.6 187 chr2L 127476 intron,intron CG11455 +,CG3164 - chr2L 127570 intron,intron CG11455 +,CG3164 - chr2L 127663 intron,intron CG11455 +,CG3164 - chr2L_13_125001 chr2L_125001 RAL-849 14 chr2L 140726 140762 chr2L 141123 141159 7 397 26.0 24.5 25.2 0.3 433 chr2L 140726 intron,exon,5` UTR CG11455 +,CG31975 -,CG31976 - chr2L 140942 intron,5` UTR,5` UTR CG11455 +,CG31975 -,CG31976 - chr2L 141159 intron,exon CG11455 +,CG31974 - chr2L_7_140001 chr2L_140001 RAL-849 15 chr2L 142452 142460 chr2L 142595 142597 4 142 31.5 29.0 30.2 0.1 145 chr2L 142452 intron,exon CG11455 +,CG31974 - chr2L 142524 intron,5` UTR CG11455 +,CG31974 - chr2L 142597 intron,5` UTR CG11455 +,CG31974 - chr2L_4_140001 chr2L_140001 RAL-849 16 chr2L 142463 142511 chr2L 142594 142654 11 142 27.5 30.0 28.8 0.4 191 chr2L 142463 intron,exon CG11455 +,CG31974 - chr2L 142558 intron,5` UTR CG11455 +,CG31974 - chr2L 142654 intron,5` UTR CG11455 +,CG31974 - chr2L_11_140001 chr2L_140001 RAL-849 17 chr2L 163811 163871 chr2L 163939 164007 15 136 16.5 15.0 15.8 0.9 196 chr2L 163811 intron spen + chr2L 163909 intron spen + chr2L 164007 intron spen + chr2L_15_160001 chr2L_160001 RAL-849 18 chr2L 165163 165234 chr2L 165478 165530 12 312 25.0 30.0 27.5 0.4 367 chr2L 165163 intron spen + chr2L 165346 intron spen + chr2L 165530 intron spen + chr2L_12_165001 chr2L_165001 RAL-849 19 chr2L 172015 172078 chr2L 172146 172209 8 131 20.0 18.0 19.0 0.4 194 chr2L 172015 intron spen + chr2L 172112 intron spen + chr2L 172209 intron spen + chr2L_8_170001 chr2L_170001 RAL-849 20 chr2L 179430 179483 chr2L 179545 179616 16 129 8.0 5.0 6.5 2.1 186 chr2L 179430 intron spen + chr2L 179523 intron spen + chr2L 179616 intron spen + chr2L_16_175001 chr2L_175001 RAL-849 21 chr2L 180256 180325 chr2L 180471 180543 9 215 19.5 25.5 22.5 0.4 287 chr2L 180256 intron spen + chr2L 180400 intron spen + chr2L 180543 intron spen + chr2L_9_180001 chr2L_180001 RAL-849 22 chr2L 263271 263310 chr2L 263467 263506 14 196 2.5 8.0 5.2 2.3 235 chr2L 263271 intron,3` UTR CG3645 -,CG17075 - chr2L 263388 intron,3` UTR CG3645 -,CG17075 - chr2L 263506 intron,3` UTR CG3645 -,CG17075 - chr2L_14_260001 chr2L_260001 RAL-849 23 chr2L 277739 277790 chr2L 277866 277907 18 126 21.5 21.5 21.5 0.8 168 chr2L 277739 5` UTR,5` UTR CG17078 -,smo + chr2L 277823 5` UTR,5` UTR CG17078 -,smo + chr2L 277907 5` UTR,intron CG17078 -,smo + chr2L_18_275001 chr2L_275001 RAL-849 24 chr2L 314263 314303 chr2L 314370 314440 4 124 20.0 18.0 19.0 0.2 177 chr2L 314263 intron Plc21C + chr2L 314352 intron Plc21C + chr2L 314440 intron Plc21C + chr2L_4_310001 chr2L_310001 RAL-849 25 chr2L 316670 316728 chr2L 316796 316838 12 125 24.5 26.0 25.2 0.5 168 chr2L 316670 intron Plc21C + chr2L 316754 intron Plc21C + chr2L 316838 intron Plc21C + chr2L_12_315001 chr2L_315001 RAL-849 26 chr2L 325098 325110 chr2L 325225 325237 4 127 13.0 7.5 10.2 0.4 139 chr2L 325098 intron Plc21C + chr2L 325168 intron Plc21C + chr2L 325237 intron Plc21C + chr2L_4_325001 chr2L_325001 RAL-849 27 chr2L 325112 325118 chr2L 325222 325245 6 124 12.0 7.5 9.8 0.6 133 chr2L 325112 intron Plc21C + chr2L 325178 intron Plc21C + chr2L 325245 intron Plc21C + chr2L_6_325001 chr2L_325001 RAL-849 28 chr2L 325126 325144 chr2L 325210 325271 10 123 9.5 8.0 8.8 1.0 145 chr2L 325126 intron Plc21C + chr2L 325198 intron Plc21C + chr2L 325271 intron Plc21C + chr2L_10_325001 chr2L_325001 RAL-849 29 chr2L 347842 347911 chr2L 355392 355461 blood 23 7550 7.5 4.5 6.0 3.3 7619 chr2L 347842 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355461 3` UTR Plc21C + chr2L_23_350001 chr2L_350001 RAL-849 30 chr2L 371392 371451 chr2L 371521 371580 14 129 9.5 5.0 7.2 1.7 188 chr2L 371392 intergenic not near genes chr2L 371486 intergenic not near genes chr2L 371580 intergenic not near genes chr2L_14_370001 chr2L_370001 RAL-849 31 chr2L 488369 488437 chr2L 488497 488565 13 128 20.0 21.5 20.8 0.6 196 chr2L 488369 intron ush + chr2L 488467 intron ush + chr2L 488565 intron ush + chr2L_13_485001 chr2L_485001 RAL-849 32 chr2L 525946 525972 chr2L 526069 526112 6 131 8.0 18.5 13.2 0.4 166 chr2L 525946 intron ush + chr2L 526029 intron ush + chr2L 526112 intron ush + chr2L_6_525001 chr2L_525001 RAL-849 33 chr2L 525981 525990 chr2L 526121 526130 4 140 9.0 24.5 16.8 0.2 149 chr2L 525981 intron ush + chr2L 526056 intron ush + chr2L 526130 intron ush + chr2L_4_525001 chr2L_525001 RAL-849 34 chr2L 528398 528460 chr2L 528533 528595 9 135 14.0 13.0 13.5 0.6 197 chr2L 528398 intron ush + chr2L 528496 intron ush + chr2L 528595 intron ush + chr2L_9_525001 chr2L_525001 RAL-849 35 chr2L 575382 575416 chr2L 575528 575562 7 146 31.0 19.0 25.0 0.3 180 chr2L 575382 3` UTR cold + chr2L 575472 3` UTR cold + chr2L 575562 3` UTR cold + chr2L_7_575001 chr2L_575001 RAL-849 36 chr2L 580084 580100 chr2L 580216 580232 4 130 25.0 16.0 20.5 0.2 148 chr2L 580084 intergenic not near genes chr2L 580158 intergenic not near genes chr2L 580232 intergenic not near genes chr2L_4_580001 chr2L_580001 RAL-849 37 chr2L 580103 580152 chr2L 580214 580284 8 125 17.5 16.0 16.8 0.4 181 chr2L 580103 intergenic not near genes chr2L 580194 intergenic not near genes chr2L 580284 intergenic not near genes chr2L_8_580001 chr2L_580001 RAL-849 38 chr2L 585504 585564 chr2L 585615 585692 18 127 20.0 17.5 18.8 0.9 188 chr2L 585504 intron Gsc - chr2L 585598 intron Gsc - chr2L 585692 intron Gsc - chr2L_18_585001 chr2L_585001 RAL-849 39 chr2L 590289 590318 chr2L 590431 590460 12 142 25.0 18.5 21.8 0.5 171 chr2L 590289 intron Gsc - chr2L 590374 intron Gsc - chr2L 590460 intron Gsc - chr2L_12_590001 chr2L_590001 RAL-849 40 chr2L 612595 612644 chr2L 612724 612780 8 143 21.5 23.5 22.5 0.3 185 chr2L 612595 intergenic not near genes chr2L 612688 intergenic not near genes chr2L 612780 intergenic not near genes chr2L_8_610001 chr2L_610001 RAL-849 41 chr2L 658523 658534 chr2L 658652 658663 4 127 29.0 20.0 24.5 0.2 140 chr2L 658523 intron ds - chr2L 658593 intron ds - chr2L 658663 intron ds - chr2L_4_655001 chr2L_655001 RAL-849 42 chr2L 686914 686923 chr2L 696004 696013 roo 7 9090 11.5 11.0 11.2 0.6 9099 chr2L 686914 intron ds - chr2L 691464 intron ds - chr2L 696013 intron ds - chr2L_7_690001 chr2L_690001 RAL-849 43 chr2L 686924 686935 chr2L 695997 696025 roo 7 9084 8.5 10.0 9.2 0.7 9101 chr2L 686924 intron ds - chr2L 691474 intron ds - chr2L 696025 intron ds - chr2L_7_690001 chr2L_690001 RAL-849 44 chr2L 719885 719917 chr2L 720068 720120 10 201 17.5 22.5 20.0 0.5 235 chr2L 719885 intergenic not near genes chr2L 720002 intergenic not near genes chr2L 720120 intergenic not near genes chr2L_10_715001 chr2L_715001 RAL-849 45 chr2L 721181 721185 chr2L 721444 721448 5 263 13.5 6.0 9.8 0.5 267 chr2L 721181 intergenic not near genes chr2L 721314 intergenic not near genes chr2L 721448 intergenic not near genes chr2L_5_720001 chr2L_720001 RAL-849 46 chr2L 749506 749574 chr2L 749633 749701 16 127 17.0 12.0 14.5 1.0 195 chr2L 749506 intergenic GABA-B-R3 + chr2L 749604 intergenic GABA-B-R3 + chr2L 749701 intergenic GABA-B-R3 + chr2L_16_745001 chr2L_745001 RAL-849 47 chr2L 764520 764578 chr2L 764670 764728 11 150 15.5 17.0 16.2 0.6 208 chr2L 764520 intergenic not near genes chr2L 764624 intergenic not near genes chr2L 764728 intergenic not near genes chr2L_11_760001 chr2L_760001 RAL-849 48 chr2L 770423 770440 chr2L 772254 772266 Bari1 4 1830 15.5 12.0 13.8 0.3 1843 chr2L 770423 intergenic not near genes chr2L 771344 intergenic not near genes chr2L 772266 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-849 49 chr2L 770445 770484 chr2L 772245 772315 Bari1 22 1826 5.5 11.5 8.5 2.3 1870 chr2L 770445 intergenic not near genes chr2L 771380 intergenic not near genes chr2L 772315 intergenic CR44614 + chr2L_22_770001 chr2L_770001 RAL-849 50 chr2L 795216 795292 chr2L 795376 795462 20 165 16.5 19.5 18.0 1.1 246 chr2L 795216 intergenic not near genes chr2L 795339 intergenic not near genes chr2L 795462 intergenic not near genes chr2L_20_795001 chr2L_795001 RAL-849 51 chr2L 809525 809594 chr2L 809657 809732 6 132 23.0 9.0 16.0 0.4 207 chr2L 809525 intergenic not near genes chr2L 809628 intergenic not near genes chr2L 809732 intergenic not near genes chr2L_6_805001 chr2L_805001 RAL-849 52 chr2L 849423 849481 chr2L 849564 849622 18 141 8.5 4.0 6.2 2.5 199 chr2L 849423 intron drongo - chr2L 849522 intron drongo - chr2L 849622 intron drongo - chr2L_18_845001 chr2L_845001 RAL-849 53 chr2L 853288 853323 chr2L 853414 853458 12 133 13.5 12.0 12.8 0.9 170 chr2L 853288 intron kraken + chr2L 853373 intron kraken + chr2L 853458 intron kraken + chr2L_12_850001 chr2L_850001 RAL-849 54 chr2L 906500 906523 chr2L 906632 906655 8 131 13.0 22.5 17.8 0.4 155 chr2L 906500 intergenic not near genes chr2L 906578 intergenic not near genes chr2L 906655 intergenic not near genes chr2L_8_905001 chr2L_905001 RAL-849 55 chr2L 906524 906570 chr2L 906626 906702 6 116 13.0 19.0 16.0 0.4 178 chr2L 906524 intergenic not near genes chr2L 906613 intergenic not near genes chr2L 906702 intergenic not near genes chr2L_6_905001 chr2L_905001 RAL-849 56 chr2L 912240 912292 chr2L 912666 912738 16 442 13.0 20.0 16.5 0.9 498 chr2L 912240 intergenic not near genes chr2L 912489 intergenic CR44061 - chr2L 912738 intergenic CR44061 - chr2L_16_910001 chr2L_910001 RAL-849 57 chr2L 922427 922473 chr2L 922558 922604 8 131 7.5 10.0 8.8 0.8 177 chr2L 922427 intergenic CG4341 + chr2L 922516 intergenic CG4341 + chr2L 922604 intergenic CG4341 + chr2L_8_920001 chr2L_920001 RAL-849 58 chr2L 931591 931663 chr2L 931720 931792 8 129 20.5 19.5 20.0 0.4 201 chr2L 931591 intron CG4341 + chr2L 931692 intron CG4341 + chr2L 931792 intron CG4341 + chr2L_8_930001 chr2L_930001 RAL-849 59 chr2L 955987 955990 chr2L 956133 956136 5 146 0.0 19.5 9.8 0.5 149 chr2L 955987 intron CG4341 + chr2L 956062 intron CG4341 + chr2L 956136 intron CG4341 + chr2L_5_955001 chr2L_955001 RAL-849 60 chr2L 973940 973956 chr2L 974072 974088 6 132 24.0 7.0 15.5 0.4 148 chr2L 973940 intergenic not near genes chr2L 974014 intergenic not near genes chr2L 974088 intergenic not near genes chr2L_6_970001 chr2L_970001 RAL-849 61 chr2L 976834 976910 chr2L 984520 984596 roo 34 7686 5.5 8.0 6.8 4.4 7762 chr2L 976834 intergenic not near genes chr2L 980715 intergenic not near genes chr2L 984596 intergenic not near genes chr2L_34_980001 chr2L_980001 RAL-849 62 chr2L 989680 989689 chr2L 989802 989822 4 142 26.0 21.5 23.8 0.2 142 chr2L 989680 3` UTR CR44801 - chr2L 989751 3` UTR CR44801 - chr2L 989822 3` UTR CR44801 - chr2L_4_985001 chr2L_985001 RAL-849 63 chr2L 989705 989728 chr2L 989800 989829 6 107 20.0 22.0 21.0 0.3 124 chr2L 989705 3` UTR CR44801 - chr2L 989767 3` UTR CR44801 - chr2L 989829 3` UTR CR44801 - chr2L_6_985001 chr2L_985001 RAL-849 64 chr2L 996675 996742 chr2L 1005824 1005887 roo 12 9147 5.0 2.0 3.5 2.7 9212 chr2L 996675 intergenic not near genes chr2L 1001281 intergenic not near genes chr2L 1005887 intergenic not near genes chr2L_12_1000001 chr2L_1000001 RAL-849 65 chr2L 1006801 1006850 chr2L 1006922 1006992 8 139 14.0 10.5 12.2 0.6 191 chr2L 1006801 intergenic not near genes chr2L 1006896 intergenic not near genes chr2L 1006992 intergenic not near genes chr2L_8_1005001 chr2L_1005001 RAL-849 66 chr2L 1025079 1025120 chr2L 1025209 1025225 11 126 13.0 18.5 15.8 0.7 146 chr2L 1025079 intron IA-2 - chr2L 1025152 intron IA-2 - chr2L 1025225 intron IA-2 - chr2L_11_1025001 chr2L_1025001 RAL-849 67 chr2L 1027579 1027610 chr2L 1027707 1027738 4 128 16.5 15.0 15.8 0.2 159 chr2L 1027579 intron IA-2 - chr2L 1027658 intron IA-2 - chr2L 1027738 intron IA-2 - chr2L_4_1025001 chr2L_1025001 RAL-849 68 chr2L 1035515 1035588 chr2L 1035642 1035715 13 126 24.5 27.0 25.8 0.5 200 chr2L 1035515 intron IA-2 - chr2L 1035615 intron IA-2 - chr2L 1035715 intron IA-2 - chr2L_13_1035001 chr2L_1035001 RAL-849 69 chr2L 1036391 1036426 chr2L 1036518 1036554 11 128 20.5 18.5 19.5 0.5 163 chr2L 1036391 intron IA-2 - chr2L 1036472 intron IA-2 - chr2L 1036554 intron IA-2 - chr2L_11_1035001 chr2L_1035001 RAL-849 70 chr2L 1039187 1039255 chr2L 1039322 1039390 9 126 14.0 13.5 13.8 0.6 203 chr2L 1039187 intron IA-2 - chr2L 1039288 intron IA-2 - chr2L 1039390 intron IA-2 - chr2L_9_1035001 chr2L_1035001 RAL-849 71 chr2L 1042580 1042631 chr2L 1042707 1042758 6 127 4.0 0.0 2.0 2.0 178 chr2L 1042580 intron IA-2 - chr2L 1042669 intron IA-2 - chr2L 1042758 intron IA-2 - chr2L_6_1040001 chr2L_1040001 RAL-849 72 chr2L 1073542 1073615 chr2L 1073681 1073754 15 136 22.0 22.5 22.2 0.6 212 chr2L 1073542 intron S - chr2L 1073648 intron S - chr2L 1073754 intron S - chr2L_15_1070001 chr2L_1070001 RAL-849 73 chr2L 1093109 1093141 chr2L 1093237 1093269 11 127 23.5 20.0 21.8 0.5 160 chr2L 1093109 intron CG4629 - chr2L 1093189 intron CG4629 - chr2L 1093269 intron CG4629 - chr2L_11_1090001 chr2L_1090001 RAL-849 74 chr2L 1100349 1100394 chr2L 1100494 1100545 12 158 16.0 22.0 19.0 0.6 196 chr2L 1100349 intron CG4629 - chr2L 1100447 intron CG4629 - chr2L 1100545 intron CG4629 - chr2L_12_1100001 chr2L_1100001 RAL-849 75 chr2L 1156820 1156885 chr2L 1156975 1157040 16 154 8.0 9.0 8.5 1.7 220 chr2L 1156820 intron capt - chr2L 1156930 intron capt - chr2L 1157040 intron capt - chr2L_16_1155001 chr2L_1155001 RAL-849 76 chr2L 1220095 1220160 chr2L 1227610 1227676 blood 26 7516 11.0 9.5 10.2 2.3 7581 chr2L 1220095 intron CG42329 + chr2L 1223886 intron CG42329 + chr2L 1227676 intron CG42329 + chr2L_26_1220001 chr2L_1220001 RAL-849 77 chr2L 1244367 1244423 chr2L 1244493 1244550 9 127 15.0 16.0 15.5 0.5 183 chr2L 1244367 intergenic not near genes chr2L 1244458 intergenic not near genes chr2L 1244550 intergenic not near genes chr2L_9_1240001 chr2L_1240001 RAL-849 78 chr2L 1261185 1261259 chr2L 1261316 1261392 19 131 2.0 9.0 5.5 2.9 207 chr2L 1261185 intron robo3 + chr2L 1261288 intron robo3 + chr2L 1261392 intron robo3 + chr2L_19_1260001 chr2L_1260001 RAL-849 79 chr2L 1312826 1312885 chr2L 1312963 1313022 10 130 18.5 15.5 17.0 0.6 196 chr2L 1312826 intergenic not near genes chr2L 1312924 intergenic not near genes chr2L 1313022 intergenic not near genes chr2L_10_1310001 chr2L_1310001 RAL-849 80 chr2L 1312887 1313065 chr2L 1312954 1313221 9 142 4.0 16.0 10.0 0.8 334 chr2L 1312887 intergenic not near genes chr2L 1313054 intergenic not near genes chr2L 1313221 intergenic not near genes chr2L_9_1310001 chr2L_1310001 RAL-849 81 chr2L 1313091 1313109 chr2L 1313255 1313273 5 164 5.0 22.5 13.8 0.3 182 chr2L 1313091 intergenic not near genes chr2L 1313182 intergenic not near genes chr2L 1313273 intergenic not near genes chr2L_5_1310001 chr2L_1310001 RAL-849 82 chr2L 1319156 1319238 chr2L 1319291 1319376 16 137 13.0 17.5 15.2 1.0 220 chr2L 1319156 intergenic not near genes chr2L 1319266 intergenic not near genes chr2L 1319376 intergenic not near genes chr2L_16_1315001 chr2L_1315001 RAL-849 83 chr2L 1321981 1322051 chr2L 1322120 1322190 16 139 15.5 18.0 16.8 0.9 209 chr2L 1321981 intergenic not near genes chr2L 1322086 intergenic not near genes chr2L 1322190 intergenic not near genes chr2L_16_1320001 chr2L_1320001 RAL-849 84 chr2L 1333670 1333759 chr2L 1333855 1333934 12 180 0.0 0.5 0.2 10.0 264 chr2L 1333670 intergenic CG5440 + chr2L 1333802 intergenic CG5440 + chr2L 1333934 intergenic CG5440 + chr2L_12_1330001 chr2L_1330001 RAL-849 85 chr2L 1378739 1378778 chr2L 1378863 1378913 15 131 24.5 22.5 23.5 0.6 174 chr2L 1378739 intergenic not near genes chr2L 1378826 intergenic not near genes chr2L 1378913 intergenic not near genes chr2L_15_1375001 chr2L_1375001 RAL-849 86 chr2L 1436580 1436590 chr2L 1436716 1436726 4 136 29.0 20.0 24.5 0.2 146 chr2L 1436580 intergenic not near genes chr2L 1436653 intergenic not near genes chr2L 1436726 intergenic not near genes chr2L_4_1435001 chr2L_1435001 RAL-849 87 chr2L 1436594 1436653 chr2L 1436710 1436789 11 132 19.5 19.5 19.5 0.5 195 chr2L 1436594 intergenic not near genes chr2L 1436692 intergenic not near genes chr2L 1436789 intergenic not near genes chr2L_11_1435001 chr2L_1435001 RAL-849 88 chr2L 1484737 1484805 chr2L 1484867 1484935 12 128 3.0 9.5 6.2 1.7 198 chr2L 1484737 intergenic not near genes chr2L 1484836 intergenic not near genes chr2L 1484935 intergenic not near genes chr2L_12_1480001 chr2L_1480001 RAL-849 89 chr2L 1498981 1499006 chr2L 1499075 1499133 5 107 18.5 21.0 19.8 0.2 152 chr2L 1498981 exon CG18131 - chr2L 1499057 exon CG18131 - chr2L 1499133 exon CG18131 - chr2L_5_1495001 chr2L_1495001 RAL-849 90 chr2L 1536443 1536522 chr2L 1536625 1536704 19 181 0.0 6.0 3.0 4.8 261 chr2L 1536443 intergenic not near genes chr2L 1536574 intergenic not near genes chr2L 1536704 intergenic not near genes chr2L_19_1535001 chr2L_1535001 RAL-849 91 chr2L 1541578 1541632 chr2L 1541737 1541791 7 158 18.0 15.5 16.8 0.4 213 chr2L 1541578 intergenic not near genes chr2L 1541684 intergenic not near genes chr2L 1541791 intergenic not near genes chr2L_7_1540001 chr2L_1540001 RAL-849 92 chr2L 1570646 1570714 chr2L 1573568 1573636 F-element 29 2922 10.5 12.5 11.5 2.3 2990 chr2L 1570646 intron haf + chr2L 1572141 intron haf + chr2L 1573636 intron haf + chr2L_29_1570001 chr2L_1570001 RAL-849 93 chr2L 1579536 1579609 chr2L 1579667 1579741 17 131 13.0 7.0 10.0 1.5 205 chr2L 1579536 intron haf + chr2L 1579638 intron haf + chr2L 1579741 intron haf + chr2L_17_1575001 chr2L_1575001 RAL-849 94 chr2L 1580273 1580337 chr2L 1580531 1580595 12 258 19.0 21.5 20.2 0.6 322 chr2L 1580273 intron haf + chr2L 1580434 intron haf + chr2L 1580595 intron haf + chr2L_12_1580001 chr2L_1580001 RAL-849 95 chr2L 1591813 1591886 chr2L 1591947 1592020 17 133 7.0 5.5 6.2 2.4 207 chr2L 1591813 intron haf + chr2L 1591916 intron haf + chr2L 1592020 intron haf + chr2L_17_1590001 chr2L_1590001 RAL-849 96 chr2L 1611149 1611206 chr2L 1611288 1611333 14 138 10.0 2.5 6.2 1.9 184 chr2L 1611149 5` UTR CG31935 - chr2L 1611241 intergenic CG31935 -,CG14352 + chr2L 1611333 intergenic CG14352 +,CG31935 - chr2L_14_1610001 chr2L_1610001 RAL-849 97 chr2L 1615384 1615391 chr2L 1615516 1615523 4 132 8.0 26.0 17.0 0.2 139 chr2L 1615384 intergenic not near genes chr2L 1615454 intergenic not near genes chr2L 1615523 intergenic not near genes chr2L_4_1615001 chr2L_1615001 RAL-849 98 chr2L 1618221 1618236 chr2L 1618599 1618616 jockey 4 380 4.5 6.5 5.5 0.6 395 chr2L 1618221 intergenic CR44603 - chr2L 1618418 intergenic CR44603 - chr2L 1618616 intergenic CR44603 - chr2L_4_1615001 chr2L_1615001 RAL-849 99 chr2L 1620011 1620290 chr2L 1620177 1620416 19 155 4.0 8.5 6.2 2.6 405 chr2L 1620011 intron CR44603 - chr2L 1620214 3` UTR CR44603 - chr2L 1620416 3` UTR CR44603 - chr2L_19_1620001 chr2L_1620001 RAL-849 100 chr2L 1634719 1634762 chr2L 1634852 1634897 10 138 11.0 10.5 10.8 0.8 178 chr2L 1634719 intergenic not near genes chr2L 1634808 intergenic not near genes chr2L 1634897 intergenic not near genes chr2L_10_1630001 chr2L_1630001 RAL-849 101 chr2L 1635375 1635394 chr2L 1635505 1635523 7 130 9.0 13.5 11.2 0.6 148 chr2L 1635375 intergenic not near genes chr2L 1635449 intergenic not near genes chr2L 1635523 intergenic not near genes chr2L_7_1635001 chr2L_1635001 RAL-849 102 chr2L 1678907 1678994 chr2L 1686440 1686508 blood 21 7520 6.0 7.0 6.5 2.8 7601 chr2L 1678907 intron chinmo + chr2L 1682708 intron chinmo + chr2L 1686508 intron chinmo + chr2L_21_1680001 chr2L_1680001 RAL-849 103 chr2L 1711303 1711387 chr2L 1711683 1711736 mdg3 34 376 5.0 9.5 7.2 4.1 433 chr2L 1711303 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711520 3` UTR frtz - chr2L 1711736 3` UTR frtz - chr2L_34_1710001 chr2L_1710001 RAL-849 104 chr2L 1721793 1721847 chr2L 1721930 1721981 6 134 11.5 19.0 15.2 0.4 188 chr2L 1721793 intron Rim2 - chr2L 1721887 intron Rim2 - chr2L 1721981 intron Rim2 - chr2L_6_1720001 chr2L_1720001 RAL-849 105 chr2L 1724767 1724817 chr2L 1724899 1724949 10 132 21.0 20.0 20.5 0.5 182 chr2L 1724767 3` UTR Eno - chr2L 1724858 3` UTR Eno - chr2L 1724949 3` UTR Eno - chr2L_10_1720001 chr2L_1720001 RAL-849 106 chr2L 1744411 1744458 chr2L 1744545 1744591 5 134 13.5 17.0 15.2 0.3 180 chr2L 1744411 intron CG17646 + chr2L 1744501 intron CG17646 + chr2L 1744591 intron CG17646 + chr2L_5_1740001 chr2L_1740001 RAL-849 107 chr2L 1744775 1744836 chr2L 1744903 1744964 8 120 17.5 22.0 19.8 0.4 189 chr2L 1744775 intron CG17646 + chr2L 1744870 intron CG17646 + chr2L 1744964 exon CG17646 + chr2L_8_1740001 chr2L_1740001 RAL-849 108 chr2L 1784030 1784049 chr2L 1784374 1784386 5 342 26.0 25.0 25.5 0.2 356 chr2L 1784030 intergenic Gr22e + chr2L 1784208 exon Gr22e + chr2L 1784386 exon Gr22e + chr2L_5_1780001 chr2L_1780001 RAL-849 109 chr2L 1784055 1784081 chr2L 1784355 1784427 12 330 21.0 24.5 22.8 0.5 372 chr2L 1784055 intergenic Gr22e + chr2L 1784241 exon Gr22e + chr2L 1784427 exon Gr22e + chr2L_12_1780001 chr2L_1780001 RAL-849 110 chr2L 1823510 1823568 chr2L 1823647 1823705 14 135 22.0 19.0 20.5 0.7 195 chr2L 1823510 intergenic CG31933 - chr2L 1823608 intergenic CG31933 - chr2L 1823705 intergenic CG31933 -,CG31664 - chr2L_14_1820001 chr2L_1820001 RAL-849 111 chr2L 1836776 1836815 chr2L 1836934 1836973 8 158 5.0 2.0 3.5 1.8 197 chr2L 1836776 intron wry + chr2L 1836874 intron wry + chr2L 1836973 intron wry + chr2L_8_1835001 chr2L_1835001 RAL-849 112 chr2L 1838528 1838565 chr2L 1838683 1838699 4 143 9.0 9.0 9.0 0.4 171 chr2L 1838528 intron wry + chr2L 1838614 intron wry + chr2L 1838699 intron wry + chr2L_4_1835001 chr2L_1835001 RAL-849 113 chr2L 1842235 1842312 chr2L 1842364 1842438 14 127 23.5 24.5 24.0 0.6 203 chr2L 1842235 intron wry + chr2L 1842336 intron wry + chr2L 1842438 intron wry + chr2L_14_1840001 chr2L_1840001 RAL-849 114 chr2L 1849278 1849304 chr2L 1849418 1849445 9 141 10.0 10.0 10.0 0.8 167 chr2L 1849278 intron wry + chr2L 1849362 intron wry + chr2L 1849445 intron wry + chr2L_9_1845001 chr2L_1845001 RAL-849 115 chr2L 1852915 1852997 chr2L 1853050 1853153 9 149 6.0 0.0 3.0 2.2 238 chr2L 1852915 intron wry + chr2L 1853034 intron wry + chr2L 1853153 intron wry + chr2L_9_1850001 chr2L_1850001 RAL-849 116 chr2L 1883393 1883445 chr2L 1884005 1884075 11 630 7.5 21.0 14.2 0.7 682 chr2L 1883393 intron CG15358 - chr2L 1883734 intron CG15358 - chr2L 1884075 intergenic CG15358 - chr2L_11_1880001 chr2L_1880001 RAL-849 117 chr2L 1901464 1901516 chr2L 1901591 1901638 16 120 26.0 23.5 24.8 0.6 174 chr2L 1901464 intron CG7337 + chr2L 1901551 intron CG7337 + chr2L 1901638 intron CG7337 + chr2L_16_1900001 chr2L_1900001 RAL-849 118 chr2L 1905047 1905098 chr2L 1905200 1905251 12 153 5.0 8.0 6.5 1.6 204 chr2L 1905047 intron CG7337 + chr2L 1905149 intron CG7337 + chr2L 1905251 intron CG7337 + chr2L_12_1905001 chr2L_1905001 RAL-849 119 chr2L 1925440 1925486 chr2L 1925567 1925613 13 126 23.0 21.5 22.2 0.6 173 chr2L 1925440 intron CG7337 + chr2L 1925526 intron CG7337 + chr2L 1925613 intron CG7337 + chr2L_13_1925001 chr2L_1925001 RAL-849 120 chr2L 1933612 1933682 chr2L 1933742 1933813 7 131 15.0 17.0 16.0 0.4 201 chr2L 1933612 intron CG7337 + chr2L 1933712 intron CG7337 + chr2L 1933813 exon CG7337 + chr2L_7_1930001 chr2L_1930001 RAL-849 121 chr2L 1948589 1948658 chr2L 1948746 1948817 10 157 0.0 7.0 3.5 2.2 228 chr2L 1948589 intergenic not near genes chr2L 1948703 intergenic not near genes chr2L 1948817 intergenic not near genes chr2L_10_1945001 chr2L_1945001 RAL-849 122 chr2L 1993164 1993213 chr2L 1993300 1993349 10 135 18.5 24.5 21.5 0.4 185 chr2L 1993164 intergenic not near genes chr2L 1993256 intergenic not near genes chr2L 1993349 intergenic not near genes chr2L_10_1990001 chr2L_1990001 RAL-849 123 chr2L 1993217 1993227 chr2L 1993291 1993343 5 120 18.5 23.5 21.0 0.2 126 chr2L 1993217 intergenic not near genes chr2L 1993280 intergenic not near genes chr2L 1993343 intergenic not near genes chr2L_5_1990001 chr2L_1990001 RAL-849 124 chr2L 1999509 1999540 chr2L 1999723 1999754 9 213 34.0 24.5 29.2 0.3 245 chr2L 1999509 intron CG33543 - chr2L 1999632 intron CG33543 - chr2L 1999754 intron CG33543 - chr2L_9_1995001 chr2L_1995001 RAL-849 125 chr2L 2007815 2007869 chr2L 2007973 2008027 16 158 6.0 11.0 8.5 1.7 212 chr2L 2007815 intergenic CR45712 + chr2L 2007921 intergenic CR45712 +,Nplp4 + chr2L 2008027 intergenic CR45712 +,Nplp4 + chr2L_16_2005001 chr2L_2005001 RAL-849 126 chr2L 2012940 2012976 chr2L 2013067 2013103 9 127 11.5 10.5 11.0 0.8 163 chr2L 2012940 intron CG4238 + chr2L 2013022 intron CG4238 + chr2L 2013103 intron CG4238 + chr2L_9_2010001 chr2L_2010001 RAL-849 127 chr2L 2068766 2068827 chr2L 2069000 2069061 9 228 19.0 23.5 21.2 0.4 295 chr2L 2068766 intron dpr3 - chr2L 2068914 intron dpr3 - chr2L 2069061 intron dpr3 - chr2L_9_2065001 chr2L_2065001 RAL-849 128 chr2L 2073319 2073352 chr2L 2073446 2073451 9 123 14.5 24.5 19.5 0.4 132 chr2L 2073319 intron dpr3 - chr2L 2073385 intron dpr3 - chr2L 2073451 intron dpr3 - chr2L_9_2070001 chr2L_2070001 RAL-849 129 chr2L 2100384 2100405 chr2L 2109551 2109556 roo 14 9174 11.5 17.5 14.5 0.9 9172 chr2L 2100384 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109556 intron dpr3 - chr2L_14_2100001 chr2L_2100001 RAL-849 130 chr2L 2112075 2112139 chr2L 2119777 2119834 opus 18 7701 4.5 7.0 5.8 2.6 7759 chr2L 2112075 intergenic not near genes chr2L 2115954 intergenic not near genes chr2L 2119834 intergenic not near genes chr2L_18_2115001 chr2L_2115001 RAL-849 131 chr2L 2160571 2160577 chr2L 2160711 2160717 4 140 23.5 22.0 22.8 0.2 146 chr2L 2160571 5` UTR aop - chr2L 2160644 intron aop - chr2L 2160717 intron aop - chr2L_4_2160001 chr2L_2160001 RAL-849 132 chr2L 2207617 2207695 chr2L 2207748 2207784 24 126 31.5 29.5 30.5 0.8 167 chr2L 2207617 exon CG33124 - chr2L 2207700 exon CG33124 - chr2L 2207784 exon CG33124 - chr2L_24_2205001 chr2L_2205001 RAL-849 133 chr2L 2250371 2250444 chr2L 2251188 2251270 8 820 8.0 15.0 11.5 0.6 899 chr2L 2250371 intergenic Ser12 - chr2L 2250820 exon Ser12 - chr2L 2251270 5` UTR Ser12 - chr2L_8_2250001 chr2L_2250001 RAL-849 134 chr2L 2256427 2256475 chr2L 2256553 2256605 9 130 4.5 4.5 4.5 1.6 178 chr2L 2256427 intergenic not near genes chr2L 2256516 intergenic not near genes chr2L 2256605 intergenic not near genes chr2L_9_2255001 chr2L_2255001 RAL-849 135 chr2L 2260764 2260820 chr2L 2260900 2260956 10 136 24.5 19.0 21.8 0.4 192 chr2L 2260764 intergenic not near genes chr2L 2260860 intergenic not near genes chr2L 2260956 intergenic not near genes chr2L_10_2260001 chr2L_2260001 RAL-849 136 chr2L 2262267 2262328 chr2L 2262394 2262455 7 127 20.0 15.0 17.5 0.4 188 chr2L 2262267 intergenic not near genes chr2L 2262361 intergenic not near genes chr2L 2262455 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-849 137 chr2L 2290532 2290616 chr2L 2290658 2290742 17 124 19.5 21.0 20.2 0.8 210 chr2L 2290532 exon robl22E - chr2L 2290637 5` UTR robl22E - chr2L 2290742 intergenic robl22E - chr2L_17_2290001 chr2L_2290001 RAL-849 138 chr2L 2293236 2293291 chr2L 2293378 2293433 14 142 16.5 19.5 18.0 0.7 197 chr2L 2293236 intergenic not near genes chr2L 2293334 intergenic not near genes chr2L 2293433 intergenic not near genes chr2L_14_2290001 chr2L_2290001 RAL-849 139 chr2L 2294023 2294066 chr2L 2299248 2299321 copia 18 5236 9.0 8.0 8.5 1.9 5298 chr2L 2294023 intergenic not near genes chr2L 2296672 intergenic not near genes chr2L 2299321 intergenic not near genes chr2L_18_2295001 chr2L_2295001 RAL-849 140 chr2L 2311019 2311092 chr2L 2311171 2311238 13 144 3.0 4.5 3.8 2.7 219 chr2L 2311019 intron CG9967 - chr2L 2311128 intron CG9967 - chr2L 2311238 intron CG9967 - chr2L_13_2310001 chr2L_2310001 RAL-849 141 chr2L 2317083 2317129 chr2L 2317304 2317350 8 221 37.5 36.5 37.0 0.2 267 chr2L 2317083 intron,intron CG9967 -,eys + chr2L 2317216 intron,intron CG9967 -,eys + chr2L 2317350 intron,intron CG9967 -,eys + chr2L_8_2315001 chr2L_2315001 RAL-849 142 chr2L 2330828 2330893 chr2L 2330967 2331032 16 137 16.0 12.5 14.2 1.1 204 chr2L 2330828 intron,intron CG9967 -,eys + chr2L 2330930 intron,intron CG9967 -,eys + chr2L 2331032 intron,intron CG9967 -,eys + chr2L_16_2330001 chr2L_2330001 RAL-849 143 chr2L 2372313 2372369 chr2L 2372449 2372505 10 136 6.5 4.0 5.2 1.6 192 chr2L 2372313 intergenic CG3609 - chr2L 2372409 intergenic CG3609 - chr2L 2372505 3` UTR CG3609 - chr2L_10_2370001 chr2L_2370001 RAL-849 144 chr2L 2396196 2396289 chr2L 2396356 2396417 8 148 0.0 4.5 2.2 2.5 221 chr2L 2396196 intron VGlut + chr2L 2396306 intron VGlut + chr2L 2396417 intron VGlut + chr2L_8_2395001 chr2L_2395001 RAL-849 145 chr2L 2412130 2412193 chr2L 2412289 2412352 11 154 27.0 21.5 24.2 0.4 222 chr2L 2412130 intron CG18641 - chr2L 2412241 intron CG18641 - chr2L 2412352 intron CG18641 - chr2L_11_2410001 chr2L_2410001 RAL-849 146 chr2L 2427327 2427392 chr2L 2427463 2427528 7 136 18.0 8.5 13.2 0.5 201 chr2L 2427327 3` UTR CR44912 - chr2L 2427428 3` UTR CR44912 - chr2L 2427528 3` UTR CR44912 - chr2L_7_2425001 chr2L_2425001 RAL-849 147 chr2L 2497595 2497617 chr2L 2497721 2497738 7 125 5.5 8.5 7.0 0.9 143 chr2L 2497595 3` UTR oaf + chr2L 2497666 3` UTR oaf + chr2L 2497738 3` UTR oaf + chr2L_7_2495001 chr2L_2495001 RAL-849 148 chr2L 2498136 2498192 chr2L 2498264 2498320 9 125 11.0 11.0 11.0 0.8 184 chr2L 2498136 3` UTR oaf + chr2L 2498228 3` UTR oaf + chr2L 2498320 3` UTR oaf + chr2L_9_2495001 chr2L_2495001 RAL-849 149 chr2L 2528230 2528286 chr2L 2528364 2528420 12 133 16.0 13.5 14.8 0.8 190 chr2L 2528230 intergenic not near genes chr2L 2528325 intergenic not near genes chr2L 2528420 intergenic not near genes chr2L_12_2525001 chr2L_2525001 RAL-849 150 chr2L 2541403 2541473 chr2L 2541536 2541601 12 131 11.0 11.0 11.0 1.0 198 chr2L 2541403 intergenic not near genes chr2L 2541502 intergenic not near genes chr2L 2541601 intergenic not near genes chr2L_12_2540001 chr2L_2540001 RAL-849 151 chr2L 2544490 2544540 chr2L 2544644 2544685 7 152 18.5 12.0 15.2 0.4 195 chr2L 2544490 intergenic not near genes chr2L 2544588 intergenic not near genes chr2L 2544685 intergenic not near genes chr2L_7_2540001 chr2L_2540001 RAL-849 152 chr2L 2552710 2552765 chr2L 2552828 2552894 17 129 18.0 21.0 19.5 0.8 184 chr2L 2552710 exon CG3515 - chr2L 2552802 5` UTR CG3515 - chr2L 2552894 intergenic CG3515 - chr2L_17_2550001 chr2L_2550001 RAL-849 153 chr2L 2565500 2565561 chr2L 2571618 2571684 297 12 6121 5.5 9.5 7.5 1.4 6184 chr2L 2565500 exon Cyp309a2 - chr2L 2568592 intron Cyp309a2 - chr2L 2571684 exon Cyp309a2 - chr2L_12_2565001 chr2L_2565001 RAL-849 154 chr2L 2595231 2595279 chr2L 2595372 2595420 6 141 6.0 17.0 11.5 0.5 189 chr2L 2595231 intergenic not near genes chr2L 2595326 intergenic not near genes chr2L 2595420 intergenic not near genes chr2L_6_2595001 chr2L_2595001 RAL-849 155 chr2L 2596021 2596072 chr2L 2596488 2596539 13 466 16.5 16.0 16.2 0.8 518 chr2L 2596021 intergenic not near genes chr2L 2596280 intergenic not near genes chr2L 2596539 intergenic not near genes chr2L_13_2595001 chr2L_2595001 RAL-849 156 chr2L 2626278 2626348 chr2L 2626837 2626907 16 551 12.5 26.5 19.5 0.8 629 chr2L 2626278 3` UTR CR45705 - chr2L 2626592 3` UTR CR45705 - chr2L 2626907 3` UTR CR45705 - chr2L_16_2625001 chr2L_2625001 RAL-849 157 chr2L 2637186 2637252 chr2L 2637331 2637399 15 147 21.5 20.0 20.8 0.7 213 chr2L 2637186 intergenic not near genes chr2L 2637292 intergenic not near genes chr2L 2637399 intergenic not near genes chr2L_15_2635001 chr2L_2635001 RAL-849 158 chr2L 2661167 2661227 chr2L 2663045 2663049 I-element 12 1866 2.0 9.0 5.5 1.8 1882 chr2L 2661167 intergenic not near genes chr2L 2662108 intergenic not near genes chr2L 2663049 intergenic not near genes chr2L_12_2660001 chr2L_2660001 RAL-849 159 chr2L 2667591 2667645 chr2L 2667710 2667774 25 127 7.5 7.5 7.5 2.9 183 chr2L 2667591 intergenic not near genes chr2L 2667682 intergenic not near genes chr2L 2667774 intergenic not near genes chr2L_25_2665001 chr2L_2665001 RAL-849 160 chr2L 2672951 2673000 chr2L 2673084 2673133 16 133 24.0 26.0 25.0 0.6 182 chr2L 2672951 intergenic not near genes chr2L 2673042 intergenic not near genes chr2L 2673133 intergenic not near genes chr2L_16_2670001 chr2L_2670001 RAL-849 161 chr2L 2700646 2700714 chr2L 2700781 2700849 14 134 21.5 19.0 20.2 0.7 203 chr2L 2700646 intron CG31690 + chr2L 2700748 intron CG31690 + chr2L 2700849 intron CG31690 + chr2L_14_2700001 chr2L_2700001 RAL-849 162 chr2L 2703395 2703435 chr2L 2703529 2703569 7 132 27.0 29.0 28.0 0.2 174 chr2L 2703395 intron CG31690 + chr2L 2703482 intron CG31690 + chr2L 2703569 intron CG31690 + chr2L_7_2700001 chr2L_2700001 RAL-849 163 chr2L 2715646 2715660 chr2L 2715772 2715785 4 125 18.0 8.5 13.2 0.3 139 chr2L 2715646 intron CG31690 + chr2L 2715716 intron CG31690 + chr2L 2715785 intron CG31690 + chr2L_4_2715001 chr2L_2715001 RAL-849 164 chr2L 2715665 2715693 chr2L 2715769 2715814 7 120 10.0 8.5 9.2 0.7 149 chr2L 2715665 intron CG31690 + chr2L 2715740 intron CG31690 + chr2L 2715814 intron CG31690 + chr2L_7_2715001 chr2L_2715001 RAL-849 165 chr2L 2725125 2725163 chr2L 2725255 2725293 5 130 21.0 33.0 27.0 0.2 168 chr2L 2725125 intergenic not near genes chr2L 2725209 intergenic CG31689 + chr2L 2725293 intergenic CG31689 + chr2L_5_2725001 chr2L_2725001 RAL-849 166 chr2L 2772577 2772608 chr2L 2779209 2779240 297 11 6631 7.5 6.0 6.8 1.4 6663 chr2L 2772577 3` UTR Syt1 - chr2L 2775908 intron Syt1 - chr2L 2779240 3` UTR Syt1 - chr2L_11_2775001 chr2L_2775001 RAL-849 167 chr2L 2803964 2804247 chr2L 2804090 2804386 22 132 22.0 18.5 20.2 1.0 422 chr2L 2803964 intergenic not near genes chr2L 2804175 intergenic not near genes chr2L 2804386 intergenic not near genes chr2L_22_2800001 chr2L_2800001 RAL-849 168 chr2L 2826500 2826576 chr2L 2826630 2826711 12 138 13.5 18.0 15.8 0.7 211 chr2L 2826500 intron Duox - chr2L 2826606 intron Duox - chr2L 2826711 intron Duox - chr2L_12_2825001 chr2L_2825001 RAL-849 169 chr2L 2831034 2831043 chr2L 2831190 2831199 4 156 26.0 23.5 24.8 0.2 165 chr2L 2831034 intergenic not near genes chr2L 2831116 intergenic not near genes chr2L 2831199 intergenic not near genes chr2L_4_2830001 chr2L_2830001 RAL-849 170 chr2L 2857770 2857798 chr2L 2857896 2857924 5 126 30.5 18.0 24.2 0.2 154 chr2L 2857770 intron CG2991 + chr2L 2857847 intron CG2991 + chr2L 2857924 intron CG2991 + chr2L_5_2855001 chr2L_2855001 RAL-849 171 chr2L 2873431 2873465 chr2L 2873559 2873593 7 128 0.0 15.0 7.5 0.8 162 chr2L 2873431 intron CG31694 - chr2L 2873512 intron CG31694 - chr2L 2873593 intron CG31694 - chr2L_7_2870001 chr2L_2870001 RAL-849 172 chr2L 2885326 2885388 chr2L 2885453 2885515 28 127 9.5 7.0 8.2 3.0 189 chr2L 2885326 intron NTPase - chr2L 2885420 intron NTPase - chr2L 2885515 intron NTPase - chr2L_28_2885001 chr2L_2885001 RAL-849 173 chr2L 2887244 2887311 chr2L 2887410 2887477 17 166 24.0 19.5 21.8 0.7 233 chr2L 2887244 intron lilli + chr2L 2887360 intron lilli + chr2L 2887477 intron lilli + chr2L_17_2885001 chr2L_2885001 RAL-849 174 chr2L 2933253 2933296 chr2L 2935482 2935533 pogo 18 2228 14.0 13.5 13.8 1.2 2280 chr2L 2933253 intron lilli + chr2L 2934393 intron lilli + chr2L 2935533 intron lilli + chr2L_18_2930001 chr2L_2930001 RAL-849 175 chr2L 2933297 2933315 chr2L 2935479 2935538 pogo 9 2220 8.5 12.5 10.5 0.8 2241 chr2L 2933297 intron lilli + chr2L 2934418 intron lilli + chr2L 2935538 intron lilli + chr2L_9_2930001 chr2L_2930001 RAL-849 176 chr2L 2964261 2964306 chr2L 2964389 2964434 12 128 14.0 6.5 10.2 1.1 173 chr2L 2964261 3` UTR Rbp9 + chr2L 2964348 3` UTR Rbp9 + chr2L 2964434 3` UTR Rbp9 + chr2L_12_2960001 chr2L_2960001 RAL-849 177 chr2L 3001572 3001604 chr2L 3001684 3001737 12 126 17.5 13.0 15.2 0.7 165 chr2L 3001572 intron CG17265 + chr2L 3001654 intron CG17265 + chr2L 3001737 intron CG17265 + chr2L_12_3000001 chr2L_3000001 RAL-849 178 chr2L 3016088 3016162 chr2L 3016216 3016290 20 127 29.0 24.0 26.5 0.7 202 chr2L 3016088 intergenic CG17265 +,CG17224 - chr2L 3016189 intergenic CG17265 +,CG17224 - chr2L 3016290 intergenic CG17224 -,CG17265 + chr2L_20_3015001 chr2L_3015001 RAL-849 179 chr2L 3046414 3046445 chr2L 3046619 3046620 4 195 21.0 14.5 17.8 0.2 206 chr2L 3046414 intron v(2)k05816 + chr2L 3046517 intron v(2)k05816 + chr2L 3046620 intron v(2)k05816 + chr2L_4_3045001 chr2L_3045001 RAL-849 180 chr2L 3049198 3049248 chr2L 3049334 3049384 9 136 17.0 18.5 17.8 0.5 186 chr2L 3049198 intron v(2)k05816 + chr2L 3049291 intron v(2)k05816 + chr2L 3049384 intron v(2)k05816 + chr2L_9_3045001 chr2L_3045001 RAL-849 181 chr2L 3072935 3073040 chr2L 3078234 3078293 copia 17 5274 4.5 5.5 5.0 2.8 5358 chr2L 3072935 intron toc - chr2L 3075614 intron toc - chr2L 3078293 intron toc - chr2L_17_3075001 chr2L_3075001 RAL-849 182 chr2L 3108853 3108898 chr2L 3108966 3109025 11 125 21.0 21.0 21.0 0.5 172 chr2L 3108853 exon toc - chr2L 3108939 intron toc - chr2L 3109025 intron toc - chr2L_11_3105001 chr2L_3105001 RAL-849 183 chr2L 3134249 3134287 chr2L 3134375 3134413 8 126 11.0 13.5 12.2 0.6 164 chr2L 3134249 intron toc - chr2L 3134331 intron toc - chr2L 3134413 intron toc - chr2L_8_3130001 chr2L_3130001 RAL-849 184 chr2L 3147265 3147298 chr2L 3147377 3147404 8 120 35.0 29.5 32.2 0.2 139 chr2L 3147265 3` UTR Mad - chr2L 3147334 3` UTR Mad - chr2L 3147404 3` UTR Mad - chr2L_8_3145001 chr2L_3145001 RAL-849 185 chr2L 3189751 3189798 chr2L 3189886 3189933 5 135 13.0 12.5 12.8 0.4 182 chr2L 3189751 intron CG34393 - chr2L 3189842 intron CG34393 - chr2L 3189933 intron CG34393 - chr2L_5_3185001 chr2L_3185001 RAL-849 186 chr2L 3192168 3192236 chr2L 3192324 3192397 40 159 4.0 9.5 6.8 5.1 229 chr2L 3192168 exon CG34393 - chr2L 3192282 intron CG34393 - chr2L 3192397 intron CG34393 - chr2L_40_3190001 chr2L_3190001 RAL-849 187 chr2L 3202692 3202761 chr2L 3210171 3210240 mdg1 21 7479 7.5 4.5 6.0 3.0 7548 chr2L 3202692 intergenic not near genes chr2L 3206466 intergenic not near genes chr2L 3210240 intergenic CR45336 + chr2L_21_3205001 chr2L_3205001 RAL-849 188 chr2L 3233585 3233659 chr2L 3233786 3233860 14 201 15.5 22.5 19.0 0.7 275 chr2L 3233585 intergenic not near genes chr2L 3233722 intergenic not near genes chr2L 3233860 intergenic not near genes chr2L_14_3230001 chr2L_3230001 RAL-849 189 chr2L 3236667 3236735 chr2L 3236802 3236870 22 132 16.5 23.0 19.8 1.1 203 chr2L 3236667 intergenic not near genes chr2L 3236768 intergenic not near genes chr2L 3236870 intergenic not near genes chr2L_22_3235001 chr2L_3235001 RAL-849 190 chr2L 3241983 3242040 chr2L 3242135 3242192 9 151 24.5 26.0 25.2 0.3 209 chr2L 3241983 intergenic not near genes chr2L 3242088 intergenic not near genes chr2L 3242192 intergenic not near genes chr2L_9_3240001 chr2L_3240001 RAL-849 191 chr2L 3251467 3251514 chr2L 3259082 3259129 springer 17 7615 5.5 8.0 6.8 2.2 7662 chr2L 3251467 intergenic not near genes chr2L 3255298 intergenic not near genes chr2L 3259129 intergenic not near genes chr2L_17_3255001 chr2L_3255001 RAL-849 192 chr2L 3261465 3261500 chr2L 3261607 3261642 5 142 18.5 16.5 17.5 0.3 177 chr2L 3261465 intergenic CR45338 -,CR45337 - chr2L 3261554 intergenic CR45338 -,CR45337 - chr2L 3261642 3` UTR CR45338 - chr2L_5_3260001 chr2L_3260001 RAL-849 193 chr2L 3267562 3267604 chr2L 3267703 3267745 15 140 7.0 7.0 7.0 1.9 183 chr2L 3267562 intergenic not near genes chr2L 3267654 intergenic not near genes chr2L 3267745 intergenic not near genes chr2L_15_3265001 chr2L_3265001 RAL-849 194 chr2L 3272920 3272969 chr2L 3273046 3273095 19 129 0.0 6.5 3.2 4.5 175 chr2L 3272920 intergenic not near genes chr2L 3273008 intergenic not near genes chr2L 3273095 intergenic not near genes chr2L_19_3270001 chr2L_3270001 RAL-849 195 chr2L 3279910 3279956 chr2L 3280041 3280087 9 131 8.5 8.5 8.5 0.9 177 chr2L 3279910 intron CG3332 - chr2L 3279998 intron CG3332 - chr2L 3280087 intron CG3332 - chr2L_9_3275001 chr2L_3275001 RAL-849 196 chr2L 3286706 3286746 chr2L 3286834 3286874 9 127 29.0 26.0 27.5 0.3 168 chr2L 3286706 intergenic not near genes chr2L 3286790 intergenic not near genes chr2L 3286874 intergenic not near genes chr2L_9_3285001 chr2L_3285001 RAL-849 197 chr2L 3291202 3291258 chr2L 3291332 3291388 12 130 16.5 18.5 17.5 0.6 186 chr2L 3291202 intergenic CG9664 - chr2L 3291295 3` UTR CG9664 - chr2L 3291388 3` UTR CG9664 - chr2L_12_3290001 chr2L_3290001 RAL-849 198 chr2L 3330240 3330283 chr2L 3330502 3330510 8 258 3.5 18.5 11.0 0.7 270 chr2L 3330240 intergenic CG33282 + chr2L 3330375 intergenic not near genes chr2L 3330510 intergenic CG3285 + chr2L_8_3330001 chr2L_3330001 RAL-849 199 chr2L 3348796 3348853 chr2L 3348931 3349002 9 147 12.0 12.0 12.0 0.7 206 chr2L 3348796 intron E23 - chr2L 3348899 intron E23 - chr2L 3349002 intron E23 - chr2L_9_3345001 chr2L_3345001 RAL-849 200 chr2L 3385996 3386267 chr2L 3386124 3386419 17 140 25.5 15.5 20.5 0.8 423 chr2L 3385996 intergenic not near genes chr2L 3386208 intergenic not near genes chr2L 3386419 intergenic CR45301 - chr2L_17_3385001 chr2L_3385001 RAL-849 201 chr2L 3388562 3388621 chr2L 3388853 3388912 pogo 20 291 2.0 7.0 4.5 3.6 350 chr2L 3388562 intergenic CG42460 - chr2L 3388737 intergenic CG42460 - chr2L 3388912 intergenic CG42460 -,CR44791 + chr2L_20_3385001 chr2L_3385001 RAL-849 202 chr2L 3402459 3402536 chr2L 3402585 3402659 17 120 20.5 19.5 20.0 0.8 200 chr2L 3402459 intergenic not near genes chr2L 3402559 intergenic not near genes chr2L 3402659 intergenic not near genes chr2L_17_3400001 chr2L_3400001 RAL-849 203 chr2L 3415934 3416004 chr2L 3416078 3416148 10 143 20.5 19.0 19.8 0.5 214 chr2L 3415934 intron pgant2 - chr2L 3416041 intron pgant2 - chr2L 3416148 intron pgant2 - chr2L_10_3415001 chr2L_3415001 RAL-849 204 chr2L 3437504 3437549 chr2L 3437872 3437924 5 374 18.5 12.5 15.5 0.3 420 chr2L 3437504 intergenic not near genes chr2L 3437714 intergenic not near genes chr2L 3437924 intergenic not near genes chr2L_5_3435001 chr2L_3435001 RAL-849 205 chr2L 3438517 3438568 chr2L 3438649 3438700 7 132 16.5 9.5 13.0 0.5 183 chr2L 3438517 intergenic not near genes chr2L 3438608 intergenic not near genes chr2L 3438700 intergenic not near genes chr2L_7_3435001 chr2L_3435001 RAL-849 206 chr2L 3444071 3444100 chr2L 3444199 3444229 7 129 27.5 25.5 26.5 0.3 158 chr2L 3444071 intergenic not near genes chr2L 3444150 intergenic not near genes chr2L 3444229 intergenic not near genes chr2L_7_3440001 chr2L_3440001 RAL-849 207 chr2L 3462012 3462081 chr2L 3462178 3462246 6 165 17.5 16.0 16.8 0.3 234 chr2L 3462012 intergenic CG3246 -,msl-2 - chr2L 3462129 intergenic msl-2 -,CG3246 - chr2L 3462246 3` UTR msl-2 - chr2L_6_3460001 chr2L_3460001 RAL-849 208 chr2L 3494384 3494441 chr2L 3494557 3494614 15 171 17.5 11.0 14.2 1.0 230 chr2L 3494384 3` UTR tim - chr2L 3494499 3` UTR tim - chr2L 3494614 3` UTR tim - chr2L_15_3490001 chr2L_3490001 RAL-849 209 chr2L 3496539 3496597 chr2L 3497260 3497318 14 719 15.0 15.0 15.0 0.9 779 chr2L 3496539 intron tim - chr2L 3496928 intron tim - chr2L 3497318 intron tim - chr2L_14_3495001 chr2L_3495001 RAL-849 210 chr2L 3498671 3498748 chr2L 3498798 3498874 10 127 20.0 17.5 18.8 0.5 203 chr2L 3498671 intron tim - chr2L 3498772 intron tim - chr2L 3498874 intron tim - chr2L_10_3495001 chr2L_3495001 RAL-849 211 chr2L 3508304 3508374 chr2L 3508432 3508502 19 128 2.5 7.0 4.8 3.3 198 chr2L 3508304 intergenic tim -,CR45299 + chr2L 3508403 intergenic CR45299 +,tim - chr2L 3508502 intergenic CR45299 +,tim - chr2L_19_3505001 chr2L_3505001 RAL-849 212 chr2L 3522984 3523053 chr2L 3523147 3523216 11 161 13.5 13.0 13.2 0.8 232 chr2L 3522984 exon Sr-CIV - chr2L 3523100 intron Sr-CIV - chr2L 3523216 exon Sr-CIV - chr2L_11_3520001 chr2L_3520001 RAL-849 213 chr2L 3548538 3548612 chr2L 3548667 3548741 15 129 11.0 7.5 9.2 1.5 203 chr2L 3548538 intergenic drm + chr2L 3548640 intergenic drm + chr2L 3548741 intergenic drm + chr2L_15_3545001 chr2L_3545001 RAL-849 214 chr2L 3550185 3550242 chr2L 3550321 3550375 8 135 14.0 15.0 14.5 0.5 190 chr2L 3550185 intergenic not near genes chr2L 3550280 intergenic not near genes chr2L 3550375 intergenic not near genes chr2L_8_3550001 chr2L_3550001 RAL-849 215 chr2L 3564646 3564713 chr2L 3564794 3564861 21 144 11.0 16.5 13.8 1.4 215 chr2L 3564646 intergenic not near genes chr2L 3564754 intergenic not near genes chr2L 3564861 intergenic not near genes chr2L_21_3560001 chr2L_3560001 RAL-849 216 chr2L 3582843 3582854 chr2L 3582970 3582981 4 127 9.0 11.5 10.2 0.4 138 chr2L 3582843 intergenic not near genes chr2L 3582912 intergenic not near genes chr2L 3582981 intergenic not near genes chr2L_4_3580001 chr2L_3580001 RAL-849 217 chr2L 3584647 3584694 chr2L 3584774 3584821 13 127 22.5 26.0 24.2 0.5 174 chr2L 3584647 intergenic not near genes chr2L 3584734 intergenic not near genes chr2L 3584821 intergenic not near genes chr2L_13_3580001 chr2L_3580001 RAL-849 218 chr2L 3592045 3592091 chr2L 3592174 3592220 12 129 21.5 23.0 22.2 0.5 175 chr2L 3592045 intergenic not near genes chr2L 3592132 intergenic not near genes chr2L 3592220 intergenic not near genes chr2L_12_3590001 chr2L_3590001 RAL-849 219 chr2L 3601855 3601920 chr2L 3601998 3602063 15 143 22.0 20.5 21.2 0.7 208 chr2L 3601855 intergenic not near genes chr2L 3601959 intergenic not near genes chr2L 3602063 intergenic not near genes chr2L_15_3600001 chr2L_3600001 RAL-849 220 chr2L 3616568 3616588 chr2L 3616695 3616715 7 127 7.0 21.0 14.0 0.5 147 chr2L 3616568 5` UTR CR44310 + chr2L 3616642 5` UTR CR44310 + chr2L 3616715 5` UTR CR44310 + chr2L_7_3615001 chr2L_3615001 RAL-849 221 chr2L 3632258 3632266 chr2L 3632355 3632390 4 118 14.0 15.5 14.8 0.3 132 chr2L 3632258 intron for - chr2L 3632324 intron for - chr2L 3632390 intron for - chr2L_4_3630001 chr2L_3630001 RAL-849 222 chr2L 3638103 3638175 chr2L 3638239 3638289 10 131 10.5 11.5 11.0 0.8 186 chr2L 3638103 intron for - chr2L 3638196 intron for - chr2L 3638289 intron for - chr2L_10_3635001 chr2L_3635001 RAL-849 223 chr2L 3649751 3649806 chr2L 3655004 3655059 copia 13 5252 6.5 7.5 7.0 1.6 5308 chr2L 3649751 intron for - chr2L 3652405 intron for - chr2L 3655059 intron for - chr2L_13_3650001 chr2L_3650001 RAL-849 224 chr2L 3663270 3663325 chr2L 3663399 3663454 11 129 16.0 12.5 14.2 0.7 184 chr2L 3663270 5` UTR CG34340 + chr2L 3663362 intron CG34340 + chr2L 3663454 intron CG34340 + chr2L_11_3660001 chr2L_3660001 RAL-849 225 chr2L 3667953 3668057 chr2L 3668107 3668183 5 143 14.0 17.0 15.5 0.3 230 chr2L 3667953 intron CG34340 + chr2L 3668068 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668183 intron,exon CG34340 +,Sfp24Ba - chr2L_5_3665001 chr2L_3665001 RAL-849 226 chr2L 3690061 3690118 chr2L 3690198 3690255 10 135 10.5 10.0 10.2 0.9 194 chr2L 3690061 intron CG34340 + chr2L 3690158 intron CG34340 + chr2L 3690255 intron CG34340 + chr2L_10_3690001 chr2L_3690001 RAL-849 227 chr2L 3702858 3702897 chr2L 3702989 3703032 5 132 13.0 9.0 11.0 0.4 174 chr2L 3702858 5` UTR CR44311 + chr2L 3702945 5` UTR CR44311 + chr2L 3703032 intergenic CR44311 + chr2L_5_3700001 chr2L_3700001 RAL-849 228 chr2L 3706193 3706243 chr2L 3706425 3706474 6 232 16.0 9.5 12.8 0.4 281 chr2L 3706193 intergenic CG31777 - chr2L 3706334 intergenic CG31777 - chr2L 3706474 intergenic CG31777 - chr2L_6_3705001 chr2L_3705001 RAL-849 229 chr2L 3783215 3783264 chr2L 3783356 3783405 8 140 27.0 20.0 23.5 0.3 190 chr2L 3783215 exon bowl + chr2L 3783310 3` UTR bowl + chr2L 3783405 3` UTR bowl + chr2L_8_3780001 chr2L_3780001 RAL-849 230 chr2L 3788371 3788385 chr2L 3788517 3788531 4 146 19.5 23.0 21.2 0.2 160 chr2L 3788371 intron CG3921 + chr2L 3788451 intron CG3921 + chr2L 3788531 intron CG3921 + chr2L_4_3785001 chr2L_3785001 RAL-849 231 chr2L 3792440 3792473 chr2L 3792583 3792616 13 143 19.0 20.0 19.5 0.6 176 chr2L 3792440 intron CG3921 + chr2L 3792528 intron CG3921 + chr2L 3792616 exon CG3921 + chr2L_13_3790001 chr2L_3790001 RAL-849 232 chr2L 3814572 3814642 chr2L 3814701 3814772 14 129 20.0 15.0 17.5 0.8 200 chr2L 3814572 intergenic not near genes chr2L 3814672 intergenic not near genes chr2L 3814772 intergenic not near genes chr2L_14_3810001 chr2L_3810001 RAL-849 233 chr2L 3885025 3885041 chr2L 3885153 3885169 6 128 6.5 10.0 8.2 0.7 144 chr2L 3885025 intron capu - chr2L 3885097 intron capu - chr2L 3885169 intron capu - chr2L_6_3885001 chr2L_3885001 RAL-849 234 chr2L 3895295 3895360 chr2L 3895434 3895499 8 139 6.5 14.0 10.2 0.7 204 chr2L 3895295 intron capu - chr2L 3895397 intron capu - chr2L 3895499 intron capu - chr2L_8_3895001 chr2L_3895001 RAL-849 235 chr2L 3897178 3897251 chr2L 3897313 3897387 11 135 12.5 13.0 12.8 0.8 209 chr2L 3897178 intron capu - chr2L 3897282 intron capu - chr2L 3897387 intron capu - chr2L_11_3895001 chr2L_3895001 RAL-849 236 chr2L 3898232 3898269 chr2L 3898367 3898386 7 132 5.5 10.5 8.0 0.8 154 chr2L 3898232 intron capu - chr2L 3898309 intron capu - chr2L 3898386 intron capu - chr2L_7_3895001 chr2L_3895001 RAL-849 237 chr2L 3905992 3906061 chr2L 3906188 3906236 11 194 27.0 29.5 28.2 0.4 244 chr2L 3905992 intron fred - chr2L 3906114 intron fred - chr2L 3906236 intron fred - chr2L_11_3905001 chr2L_3905001 RAL-849 238 chr2L 3915293 3915309 chr2L 3915479 3915495 4 186 9.5 14.5 12.0 0.3 202 chr2L 3915293 intron fred - chr2L 3915394 intron fred - chr2L 3915495 intron fred - chr2L_4_3915001 chr2L_3915001 RAL-849 239 chr2L 3929083 3929125 chr2L 3929212 3929259 16 134 9.0 6.5 7.8 1.8 176 chr2L 3929083 intron fred - chr2L 3929171 intron fred - chr2L 3929259 intron fred - chr2L_16_3925001 chr2L_3925001 RAL-849 240 chr2L 3936578 3936656 chr2L 3936707 3936786 10 128 11.5 12.0 11.8 0.8 208 chr2L 3936578 intron fred - chr2L 3936682 intron fred - chr2L 3936786 intron fred - chr2L_10_3935001 chr2L_3935001 RAL-849 241 chr2L 3943743 3943817 chr2L 3943884 3943958 4 141 14.0 17.5 15.8 0.2 215 chr2L 3943743 intron fred - chr2L 3943850 intron fred - chr2L 3943958 intron fred - chr2L_4_3940001 chr2L_3940001 RAL-849 242 chr2L 3947376 3947439 chr2L 3947630 3947693 10 254 15.0 13.0 14.0 0.7 317 chr2L 3947376 intron fred - chr2L 3947534 intron fred - chr2L 3947693 intron fred - chr2L_10_3945001 chr2L_3945001 RAL-849 243 chr2L 3948009 3948019 chr2L 3948147 3948157 4 138 18.5 9.0 13.8 0.3 148 chr2L 3948009 intron fred - chr2L 3948083 intron fred - chr2L 3948157 intron fred - chr2L_4_3945001 chr2L_3945001 RAL-849 244 chr2L 3948023 3948064 chr2L 3948144 3948201 10 134 11.5 9.0 10.2 0.9 178 chr2L 3948023 intron fred - chr2L 3948112 intron fred - chr2L 3948201 intron fred - chr2L_10_3945001 chr2L_3945001 RAL-849 245 chr2L 3950040 3950106 chr2L 3950166 3950232 12 126 18.5 23.0 20.8 0.6 192 chr2L 3950040 intron fred - chr2L 3950136 intron fred - chr2L 3950232 intron fred - chr2L_12_3950001 chr2L_3950001 RAL-849 246 chr2L 3952113 3952145 chr2L 3952255 3952322 9 169 17.5 19.5 18.5 0.5 209 chr2L 3952113 intron fred - chr2L 3952218 intron fred - chr2L 3952322 intron fred - chr2L_9_3950001 chr2L_3950001 RAL-849 247 chr2L 3968269 3968333 chr2L 3968419 3968483 9 148 16.5 13.5 15.0 0.6 214 chr2L 3968269 intron fred - chr2L 3968376 intron fred - chr2L 3968483 intron fred - chr2L_9_3965001 chr2L_3965001 RAL-849 248 chr2L 3985941 3985974 chr2L 3986069 3986102 10 128 14.0 14.0 14.0 0.7 161 chr2L 3985941 intron fred - chr2L 3986022 intron fred - chr2L 3986102 intron fred - chr2L_10_3985001 chr2L_3985001 RAL-849 249 chr2L 3999135 3999200 chr2L 3999268 3999333 14 130 20.0 21.0 20.5 0.7 198 chr2L 3999135 intergenic not near genes chr2L 3999234 intergenic not near genes chr2L 3999333 intergenic not near genes chr2L_14_3995001 chr2L_3995001 RAL-849 250 chr2L 4037760 4037808 chr2L 4037897 4037945 24 137 3.0 6.0 4.5 4.4 185 chr2L 4037760 intron ed + chr2L 4037852 intron ed + chr2L 4037945 intron ed + chr2L_24_4035001 chr2L_4035001 RAL-849 251 chr2L 4054501 4054554 chr2L 4054639 4054693 13 139 11.0 10.5 10.8 1.1 192 chr2L 4054501 intron ed + chr2L 4054597 intron ed + chr2L 4054693 intron ed + chr2L_13_4050001 chr2L_4050001 RAL-849 252 chr2L 4060123 4060194 chr2L 4060249 4060320 8 126 16.0 13.0 14.5 0.5 197 chr2L 4060123 intron ed + chr2L 4060222 intron ed + chr2L 4060320 intron ed + chr2L_8_4060001 chr2L_4060001 RAL-849 253 chr2L 4062949 4063005 chr2L 4063106 4063162 11 144 11.0 10.0 10.5 1.0 213 chr2L 4062949 intron ed + chr2L 4063056 intron ed + chr2L 4063162 intron ed + chr2L_11_4060001 chr2L_4060001 RAL-849 254 chr2L 4066002 4066057 chr2L 4068877 4068906 Juan 11 2871 7.5 7.0 7.2 1.3 2904 chr2L 4066002 intron ed + chr2L 4067454 intron ed + chr2L 4068906 intron ed + chr2L_11_4065001 chr2L_4065001 RAL-849 255 chr2L 4072295 4072320 chr2L 4072435 4072460 6 140 12.5 12.5 12.5 0.4 165 chr2L 4072295 intron ed + chr2L 4072378 intron ed + chr2L 4072460 intron ed + chr2L_6_4070001 chr2L_4070001 RAL-849 256 chr2L 4124233 4124359 chr2L 4124363 4124502 15 162 4.0 4.5 4.2 2.9 269 chr2L 4124233 intergenic Sr-CI + chr2L 4124368 intergenic Sr-CI + chr2L 4124502 intergenic Sr-CI + chr2L_15_4120001 chr2L_4120001 RAL-849 257 chr2L 4125209 4125277 chr2L 4125364 4125421 11 153 12.0 20.5 16.2 0.6 212 chr2L 4125209 intergenic not near genes chr2L 4125315 intergenic not near genes chr2L 4125421 intergenic not near genes chr2L_11_4125001 chr2L_4125001 RAL-849 258 chr2L 4138094 4138158 chr2L 4138224 4138289 9 128 25.0 26.0 25.5 0.3 195 chr2L 4138094 intergenic not near genes chr2L 4138192 intergenic not near genes chr2L 4138289 intergenic not near genes chr2L_9_4135001 chr2L_4135001 RAL-849 259 chr2L 4150625 4150657 chr2L 4150740 4150779 8 127 15.5 19.0 17.2 0.4 154 chr2L 4150625 exon CG2955 + chr2L 4150702 exon CG2955 + chr2L 4150779 exon CG2955 + chr2L_8_4150001 chr2L_4150001 RAL-849 260 chr2L 4159365 4159421 chr2L 4159615 4159671 6 250 11.5 17.0 14.2 0.4 306 chr2L 4159365 intergenic not near genes chr2L 4159518 intergenic not near genes chr2L 4159671 intergenic not near genes chr2L_6_4155001 chr2L_4155001 RAL-849 261 chr2L 4166337 4166408 chr2L 4166470 4166541 31 130 4.5 6.0 5.2 5.0 204 chr2L 4166337 intergenic Or24a - chr2L 4166439 intergenic Or24a - chr2L 4166541 intergenic Or24a - chr2L_31_4165001 chr2L_4165001 RAL-849 262 chr2L 4180077 4180118 chr2L 4180203 4180244 4 126 2.5 7.0 4.8 0.7 167 chr2L 4180077 intergenic not near genes chr2L 4180160 intergenic not near genes chr2L 4180244 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-849 263 chr2L 4184422 4184504 chr2L 4184791 4184873 24 368 5.0 5.0 5.0 4.0 451 chr2L 4184422 intergenic not near genes chr2L 4184648 intergenic not near genes chr2L 4184873 intergenic not near genes chr2L_24_4180001 chr2L_4180001 RAL-849 264 chr2L 4224353 4224396 chr2L 4224482 4224525 6 129 16.5 16.5 16.5 0.3 172 chr2L 4224353 intergenic CG3702 - chr2L 4224439 intergenic CG3702 - chr2L 4224525 intergenic CG3702 - chr2L_6_4220001 chr2L_4220001 RAL-849 265 chr2L 4229581 4229636 chr2L 4229724 4229789 8 150 11.5 16.0 13.8 0.5 208 chr2L 4229581 intergenic CR44608 + chr2L 4229685 intergenic CR44608 + chr2L 4229789 intergenic CR44608 + chr2L_8_4225001 chr2L_4225001 RAL-849 266 chr2L 4293876 4293903 chr2L 4294018 4294045 6 140 18.5 11.0 14.8 0.4 169 chr2L 4293876 intron tutl + chr2L 4293960 intron tutl + chr2L 4294045 intron tutl + chr2L_6_4290001 chr2L_4290001 RAL-849 267 chr2L 4293938 4294011 chr2L 4294006 4294151 9 126 9.5 10.0 9.8 0.8 213 chr2L 4293938 intron tutl + chr2L 4294044 intron tutl + chr2L 4294151 intron tutl + chr2L_9_4290001 chr2L_4290001 RAL-849 268 chr2L 4313821 4313827 chr2L 4313949 4313954 5 128 20.0 28.0 24.0 0.2 133 chr2L 4313821 intron tutl + chr2L 4313888 intron tutl + chr2L 4313954 intron tutl + chr2L_5_4310001 chr2L_4310001 RAL-849 269 chr2L 4317881 4317884 chr2L 4318009 4318012 5 128 32.0 27.5 29.8 0.2 131 chr2L 4317881 intron tutl + chr2L 4317946 intron tutl + chr2L 4318012 intron tutl + chr2L_5_4315001 chr2L_4315001 RAL-849 270 chr2L 4317888 4317902 chr2L 4317995 4318030 7 125 24.0 25.5 24.8 0.3 142 chr2L 4317888 intron tutl + chr2L 4317959 intron tutl + chr2L 4318030 intron tutl + chr2L_7_4315001 chr2L_4315001 RAL-849 271 chr2L 4345442 4345519 chr2L 4345570 4345647 18 128 18.5 18.0 18.2 0.9 205 chr2L 4345442 3` UTR Atet + chr2L 4345544 3` UTR Atet + chr2L 4345647 3` UTR Atet + chr2L_18_4345001 chr2L_4345001 RAL-849 272 chr2L 4351426 4351498 chr2L 4351552 4351624 17 125 28.5 27.5 28.0 0.6 198 chr2L 4351426 5` UTR CR44700 + chr2L 4351525 intergenic CR44700 + chr2L 4351624 intergenic CR44700 + chr2L_17_4350001 chr2L_4350001 RAL-849 273 chr2L 4371165 4371182 chr2L 4371303 4371320 7 138 16.0 19.5 17.8 0.4 155 chr2L 4371165 intron Traf4 + chr2L 4371242 intron Traf4 + chr2L 4371320 intron Traf4 + chr2L_7_4370001 chr2L_4370001 RAL-849 274 chr2L 4431008 4431057 chr2L 4431155 4431192 4 144 9.5 6.5 8.0 0.4 184 chr2L 4431008 intron CG15431 - chr2L 4431100 intron CG15431 - chr2L 4431192 intron CG15431 - chr2L_4_4430001 chr2L_4430001 RAL-849 275 chr2L 4586931 4586990 chr2L 4587073 4587132 12 141 20.5 26.0 23.2 0.5 201 chr2L 4586931 intron dp - chr2L 4587032 intron dp - chr2L 4587132 intron dp - chr2L_12_4585001 chr2L_4585001 RAL-849 276 chr2L 4595815 4595857 chr2L 4595955 4595997 8 140 12.0 12.0 12.0 0.6 182 chr2L 4595815 intron dp - chr2L 4595906 intron dp - chr2L 4595997 intron dp - chr2L_8_4595001 chr2L_4595001 RAL-849 277 chr2L 4601665 4601727 chr2L 4609156 4609218 mdg1 26 7491 9.5 8.0 8.8 2.7 7553 chr2L 4601665 intron dp - chr2L 4605442 intron dp - chr2L 4609218 intron dp - chr2L_26_4605001 chr2L_4605001 RAL-849 278 chr2L 4613684 4613703 chr2L 4613824 4613843 6 140 12.0 9.5 10.8 0.5 159 chr2L 4613684 intron dp - chr2L 4613764 intron dp - chr2L 4613843 intron dp - chr2L_6_4610001 chr2L_4610001 RAL-849 279 chr2L 4622386 4622451 chr2L 4622522 4622587 9 134 18.0 22.0 20.0 0.4 201 chr2L 4622386 intergenic not near genes chr2L 4622486 intergenic not near genes chr2L 4622587 intergenic not near genes chr2L_9_4620001 chr2L_4620001 RAL-849 280 chr2L 4658444 4658501 chr2L 4658572 4658634 8 127 18.5 12.5 15.5 0.5 190 chr2L 4658444 intergenic not near genes chr2L 4658539 intergenic not near genes chr2L 4658634 intergenic not near genes chr2L_8_4655001 chr2L_4655001 RAL-849 281 chr2L 4661824 4661854 chr2L 4669454 4669476 opus 11 7627 6.5 17.0 11.8 0.9 7652 chr2L 4661824 intergenic not near genes chr2L 4665650 intergenic not near genes chr2L 4669476 intergenic not near genes chr2L_11_4665001 chr2L_4665001 RAL-849 282 chr2L 4679942 4679997 chr2L 4680081 4680137 6 139 2.5 2.0 2.2 1.9 195 chr2L 4679942 intergenic not near genes chr2L 4680040 intergenic not near genes chr2L 4680137 intergenic not near genes chr2L_6_4680001 chr2L_4680001 RAL-849 283 chr2L 4681105 4681140 chr2L 4681231 4681266 6 126 14.0 20.5 17.2 0.3 161 chr2L 4681105 intergenic not near genes chr2L 4681186 intergenic not near genes chr2L 4681266 intergenic not near genes chr2L_6_4680001 chr2L_4680001 RAL-849 284 chr2L 4701823 4701851 chr2L 4702015 4702043 5 191 17.5 23.0 20.2 0.2 220 chr2L 4701823 intron CG34351 + chr2L 4701933 intron CG34351 + chr2L 4702043 intron CG34351 + chr2L_5_4700001 chr2L_4700001 RAL-849 285 chr2L 4732325 4732379 chr2L 4732456 4732510 11 131 12.5 9.5 11.0 0.9 185 chr2L 4732325 intergenic CG15631 - chr2L 4732418 3` UTR CG15631 - chr2L 4732510 exon CG15631 - chr2L_11_4730001 chr2L_4730001 RAL-849 286 chr2L 4748650 4748707 chr2L 4748779 4748836 8 129 27.5 22.5 25.0 0.3 186 chr2L 4748650 intron CG15630 - chr2L 4748743 intron CG15630 - chr2L 4748836 intron CG15630 - chr2L_8_4745001 chr2L_4745001 RAL-849 287 chr2L 4781082 4781135 chr2L 4781240 4781280 11 148 16.5 19.0 17.8 0.6 198 chr2L 4781082 intron CG15630 - chr2L 4781181 intron CG15630 - chr2L 4781280 intron CG15630 - chr2L_11_4780001 chr2L_4780001 RAL-849 288 chr2L 4783986 4784059 chr2L 4784138 4784206 6 151 13.0 15.0 14.0 0.4 220 chr2L 4783986 intron CG15630 - chr2L 4784096 intron CG15630 - chr2L 4784206 intron CG15630 - chr2L_6_4780001 chr2L_4780001 RAL-849 289 chr2L 4789874 4789944 chr2L 4790008 4790078 6 129 19.0 16.5 17.8 0.3 204 chr2L 4789874 intron CG15630 - chr2L 4789976 intron CG15630 - chr2L 4790078 intron CG15630 - chr2L_6_4785001 chr2L_4785001 RAL-849 290 chr2L 4793283 4793321 chr2L 4793628 4793666 8 345 7.0 13.0 10.0 0.7 383 chr2L 4793283 intron CG15630 - chr2L 4793474 intron CG15630 - chr2L 4793666 exon CG15630 - chr2L_8_4790001 chr2L_4790001 RAL-849 291 chr2L 4819443 4819517 chr2L 4819616 4819690 21 173 5.5 10.0 7.8 2.4 247 chr2L 4819443 intergenic not near genes chr2L 4819566 intergenic not near genes chr2L 4819690 intergenic not near genes chr2L_21_4815001 chr2L_4815001 RAL-849 292 chr2L 4825668 4825723 chr2L 4825798 4825853 11 130 22.0 15.0 18.5 0.6 185 chr2L 4825668 exon CG15628 + chr2L 4825760 intron CG15628 + chr2L 4825853 intron CG15628 + chr2L_11_4825001 chr2L_4825001 RAL-849 293 chr2L 4841030 4841098 chr2L 4841156 4841224 22 124 22.0 21.0 21.5 1.0 194 chr2L 4841030 intron CG12194 + chr2L 4841127 intron CG12194 + chr2L 4841224 3` UTR CG12194 + chr2L_22_4840001 chr2L_4840001 RAL-849 294 chr2L 4849285 4849334 chr2L 4849398 4849444 14 128 20.0 21.5 20.8 0.6 159 chr2L 4849285 exon CG11927 + chr2L 4849364 3` UTR CG11927 + chr2L 4849444 3` UTR,3` UTR CG11927 +,mRpS2 - chr2L_14_4845001 chr2L_4845001 RAL-849 295 chr2L 4858408 4858452 chr2L 4858552 4858589 13 141 11.5 1.5 6.5 1.7 181 chr2L 4858408 intron pog + chr2L 4858498 intron pog + chr2L 4858589 intron pog + chr2L_13_4855001 chr2L_4855001 RAL-849 296 chr2L 4862264 4862303 chr2L 4862370 4862429 10 124 31.0 31.5 31.2 0.3 165 chr2L 4862264 intron pog + chr2L 4862346 intron pog + chr2L 4862429 intron pog + chr2L_10_4860001 chr2L_4860001 RAL-849 297 chr2L 4863175 4863182 chr2L 4863314 4863321 5 139 18.0 19.0 18.5 0.3 146 chr2L 4863175 intron pog + chr2L 4863248 intron pog + chr2L 4863321 intron pog + chr2L_5_4860001 chr2L_4860001 RAL-849 298 chr2L 4903837 4903866 chr2L 4903994 4904023 6 157 16.0 14.5 15.2 0.4 186 chr2L 4903837 3` UTR CG3036 + chr2L 4903930 3` UTR CG2837 - chr2L 4904023 3` UTR CG2837 - chr2L_6_4900001 chr2L_4900001 RAL-849 299 chr2L 4912102 4912135 chr2L 4912222 4912260 4 119 17.5 20.5 19.0 0.2 158 chr2L 4912102 intron hoe1 - chr2L 4912181 intron hoe1 - chr2L 4912260 intron hoe1 - chr2L_4_4910001 chr2L_4910001 RAL-849 300 chr2L 4918129 4918198 chr2L 4923252 4923359 jockey 14 5134 0.0 5.0 2.5 4.0 5230 chr2L 4918129 intron hoe1 - chr2L 4920744 intron hoe1 - chr2L 4923359 intron hoe1 - chr2L_14_4920001 chr2L_4920001 RAL-849 301 chr2L 4923556 4923628 chr2L 4923723 4923795 16 165 15.5 17.5 16.5 0.9 239 chr2L 4923556 intron hoe1 - chr2L 4923676 intron hoe1 - chr2L 4923795 intron hoe1 - chr2L_16_4920001 chr2L_4920001 RAL-849 302 chr2L 4925654 4925695 chr2L 4925783 4925824 5 129 22.0 23.5 22.8 0.2 170 chr2L 4925654 intron hoe1 - chr2L 4925739 intron hoe1 - chr2L 4925824 intron hoe1 - chr2L_5_4925001 chr2L_4925001 RAL-849 303 chr2L 4953467 4953506 chr2L 4953758 4953766 pogo 15 288 8.0 2.0 5.0 2.5 299 chr2L 4953467 intergenic Jon25Bii - chr2L 4953616 intergenic Jon25Bii - chr2L 4953766 intergenic not near genes chr2L_15_4950001 chr2L_4950001 RAL-849 304 chr2L 4993169 4993241 chr2L 4993303 4993375 12 134 20.0 21.0 20.5 0.6 206 chr2L 4993169 intergenic CG34126 +,Rtnl1 - chr2L 4993272 intergenic Rtnl1 - chr2L 4993375 intergenic Rtnl1 - chr2L_12_4990001 chr2L_4990001 RAL-849 305 chr2L 4996049 4996108 chr2L 4996176 4996234 22 126 10.5 13.5 12.0 1.7 185 chr2L 4996049 intron Rtnl1 - chr2L 4996142 intron Rtnl1 - chr2L 4996234 intron Rtnl1 - chr2L_22_4995001 chr2L_4995001 RAL-849 306 chr2L 5006008 5006020 chr2L 5006139 5006151 5 131 30.0 23.0 26.5 0.2 143 chr2L 5006008 intron Rtnl1 - chr2L 5006080 intron Rtnl1 - chr2L 5006151 intron Rtnl1 - chr2L_5_5005001 chr2L_5005001 RAL-849 307 chr2L 5006021 5006086 chr2L 5006137 5006216 10 124 19.0 21.5 20.2 0.5 195 chr2L 5006021 intron Rtnl1 - chr2L 5006118 intron Rtnl1 - chr2L 5006216 intron Rtnl1 - chr2L_10_5005001 chr2L_5005001 RAL-849 308 chr2L 5040649 5040702 chr2L 5040795 5040848 10 144 22.5 31.0 26.8 0.4 199 chr2L 5040649 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040748 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040848 3` UTR CG31650 - chr2L_10_5040001 chr2L_5040001 RAL-849 309 chr2L 5080449 5080496 chr2L 5080592 5080639 6 143 30.5 23.0 26.8 0.2 190 chr2L 5080449 intron pgant5 - chr2L 5080544 intron pgant5 - chr2L 5080639 intron pgant5 - chr2L_6_5080001 chr2L_5080001 RAL-849 310 chr2L 5085006 5085068 chr2L 5085148 5085197 5 139 23.5 23.0 23.2 0.2 191 chr2L 5085006 intron pgant5 - chr2L 5085102 intron pgant5 - chr2L 5085197 intron pgant5 - chr2L_5_5085001 chr2L_5085001 RAL-849 311 chr2L 5092368 5092433 chr2L 5092505 5092570 9 137 11.5 10.0 10.8 0.8 202 chr2L 5092368 intron pgant5 - chr2L 5092469 intron pgant5 - chr2L 5092570 intron pgant5 - chr2L_9_5090001 chr2L_5090001 RAL-849 312 chr2L 5117252 5117323 chr2L 5117384 5117455 15 132 23.0 27.5 25.2 0.6 203 chr2L 5117252 intron Msp300 + chr2L 5117354 intron Msp300 + chr2L 5117455 intron Msp300 + chr2L_15_5115001 chr2L_5115001 RAL-849 313 chr2L 5147683 5147747 chr2L 5147955 5147984 16 277 21.0 24.0 22.5 0.7 301 chr2L 5147683 intron Msp300 + chr2L 5147834 intron Msp300 + chr2L 5147984 intron Msp300 + chr2L_16_5145001 chr2L_5145001 RAL-849 314 chr2L 5200539 5200605 chr2L 5215739 5215808 18 15209 53.0 51.5 52.2 0.3 15269 chr2L 5200539 exon Msp300 + chr2L 5208174 exon Cyp28d2 + chr2L 5215808 exon CG14034 - chr2L_18_5205001 chr2L_5205001 RAL-849 315 chr2L 5237908 5237921 chr2L 5237998 5238061 6 132 21.5 22.5 22.0 0.3 153 chr2L 5237908 intron tkv - chr2L 5237984 intron tkv - chr2L 5238061 intron tkv - chr2L_6_5235001 chr2L_5235001 RAL-849 316 chr2L 5263672 5263729 chr2L 5263804 5263861 8 132 17.0 18.0 17.5 0.4 189 chr2L 5263672 intron tkv - chr2L 5263766 intron tkv - chr2L 5263861 intron tkv - chr2L_8_5260001 chr2L_5260001 RAL-849 317 chr2L 5269948 5270013 chr2L 5270076 5270136 20 127 28.0 28.0 28.0 0.7 188 chr2L 5269948 intron,exon tkv -,Cyp4ac3 + chr2L 5270042 intron,exon tkv -,Cyp4ac3 + chr2L 5270136 intron,exon tkv -,Cyp4ac3 + chr2L_20_5270001 chr2L_5270001 RAL-849 318 chr2L 5276669 5276725 chr2L 5276803 5276859 10 133 21.0 23.0 22.0 0.4 190 chr2L 5276669 exon Bsg25D - chr2L 5276764 intron Bsg25D - chr2L 5276859 intron Bsg25D - chr2L_10_5275001 chr2L_5275001 RAL-849 319 chr2L 5342744 5342760 chr2L 5345174 5345190 Doc 4 2430 4.5 4.0 4.2 0.8 2446 chr2L 5342744 intergenic not near genes chr2L 5343967 intergenic not near genes chr2L 5345190 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-849 320 chr2L 5342761 5342789 chr2L 5345156 5345219 Doc 10 2406 4.0 3.5 3.8 2.1 2458 chr2L 5342761 intergenic not near genes chr2L 5343990 intergenic not near genes chr2L 5345219 intergenic not near genes chr2L_10_5340001 chr2L_5340001 RAL-849 321 chr2L 5345426 5345457 chr2L 5345536 5345573 8 123 14.5 18.0 16.2 0.5 147 chr2L 5345426 intergenic not near genes chr2L 5345500 intergenic not near genes chr2L 5345573 intergenic not near genes chr2L_8_5345001 chr2L_5345001 RAL-849 322 chr2L 5375122 5375161 chr2L 5375248 5375287 7 126 15.0 19.0 17.0 0.4 165 chr2L 5375122 intergenic not near genes chr2L 5375204 intergenic not near genes chr2L 5375287 intergenic not near genes chr2L_7_5375001 chr2L_5375001 RAL-849 323 chr2L 5378384 5378452 chr2L 5378513 5378581 25 129 6.0 6.5 6.2 3.5 197 chr2L 5378384 intergenic not near genes chr2L 5378482 intergenic not near genes chr2L 5378581 intergenic not near genes chr2L_25_5375001 chr2L_5375001 RAL-849 324 chr2L 5396359 5396382 chr2L 5396485 5396502 7 125 20.0 19.0 19.5 0.3 143 chr2L 5396359 intergenic not near genes chr2L 5396430 intergenic not near genes chr2L 5396502 intergenic not near genes chr2L_7_5395001 chr2L_5395001 RAL-849 325 chr2L 5436487 5436536 chr2L 5436614 5436638 8 123 20.5 23.0 21.8 0.4 151 chr2L 5436487 3` UTR CR31647 - chr2L 5436562 3` UTR CR31647 - chr2L 5436638 3` UTR CR31647 - chr2L_8_5435001 chr2L_5435001 RAL-849 326 chr2L 5475102 5475132 chr2L 5475257 5475287 8 155 14.5 9.5 12.0 0.6 185 chr2L 5475102 intergenic not near genes chr2L 5475194 intergenic not near genes chr2L 5475287 intergenic not near genes chr2L_8_5475001 chr2L_5475001 RAL-849 327 chr2L 5484999 5485061 chr2L 5485129 5485191 13 129 23.0 14.5 18.8 0.7 192 chr2L 5484999 intergenic not near genes chr2L 5485095 intergenic not near genes chr2L 5485191 intergenic not near genes chr2L_13_5485001 chr2L_5485001 RAL-849 328 chr2L 5500016 5500059 chr2L 5500151 5500195 17 136 10.5 19.0 14.8 1.1 179 chr2L 5500016 intergenic not near genes chr2L 5500106 intergenic not near genes chr2L 5500195 intergenic not near genes chr2L_17_5500001 chr2L_5500001 RAL-849 329 chr2L 5582277 5582347 chr2L 5582417 5582487 20 139 23.0 24.5 23.8 0.8 210 chr2L 5582277 intergenic not near genes chr2L 5582382 intergenic not near genes chr2L 5582487 intergenic not near genes chr2L_20_5580001 chr2L_5580001 RAL-849 330 chr2L 5605601 5605678 chr2L 5605745 5605820 4 142 3.0 0.0 1.5 1.6 219 chr2L 5605601 intron CG14010 - chr2L 5605710 intron CG14010 - chr2L 5605820 intron CG14010 - chr2L_4_5605001 chr2L_5605001 RAL-849 331 chr2L 5611299 5611352 chr2L 5611435 5611488 8 136 3.0 2.5 2.8 2.1 189 chr2L 5611299 intron CG14010 - chr2L 5611394 intron CG14010 - chr2L 5611488 intron CG14010 - chr2L_8_5610001 chr2L_5610001 RAL-849 332 chr2L 5643193 5643215 chr2L 5643328 5643350 5 135 7.0 4.0 5.5 0.8 157 chr2L 5643193 intron CG31646 - chr2L 5643272 intron CG31646 - chr2L 5643350 intron CG31646 - chr2L_5_5640001 chr2L_5640001 RAL-849 333 chr2L 5646645 5646677 chr2L 5646774 5646800 16 128 16.5 18.0 17.2 0.9 155 chr2L 5646645 intron CG31646 - chr2L 5646722 intron CG31646 - chr2L 5646800 intron CG31646 - chr2L_16_5645001 chr2L_5645001 RAL-849 334 chr2L 5666265 5666324 chr2L 5666383 5666464 17 137 8.0 2.5 5.2 2.7 199 chr2L 5666265 intron Hsp60C + chr2L 5666364 intron Hsp60C + chr2L 5666464 intron Hsp60C + chr2L_17_5665001 chr2L_5665001 RAL-849 335 chr2L 5676872 5676901 chr2L 5677018 5677047 5 146 23.5 19.5 21.5 0.2 175 chr2L 5676872 intergenic not near genes chr2L 5676960 intergenic not near genes chr2L 5677047 intergenic not near genes chr2L_5_5675001 chr2L_5675001 RAL-849 336 chr2L 5695816 5695887 chr2L 5695958 5696029 14 142 18.5 21.0 19.8 0.7 213 chr2L 5695816 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696029 intergenic not near genes chr2L_14_5695001 chr2L_5695001 RAL-849 337 chr2L 5709014 5709075 chr2L 5709223 5709284 13 209 23.5 22.0 22.8 0.5 270 chr2L 5709014 intron CG7236 + chr2L 5709149 intron CG7236 + chr2L 5709284 intron CG7236 + chr2L_13_5705001 chr2L_5705001 RAL-849 338 chr2L 5764846 5764929 chr2L 5765005 5765087 9 158 0.0 7.5 3.8 1.9 241 chr2L 5764846 intron obst-E - chr2L 5764966 intron obst-E - chr2L 5765087 intron obst-E - chr2L_9_5760001 chr2L_5760001 RAL-849 339 chr2L 5784910 5784967 chr2L 5785043 5785100 11 133 16.5 19.0 17.8 0.6 190 chr2L 5784910 intron CG9171 - chr2L 5785005 intron CG9171 - chr2L 5785100 intron CG9171 - chr2L_11_5785001 chr2L_5785001 RAL-849 340 chr2L 5789983 5790055 chr2L 5790111 5790183 12 128 14.5 12.0 13.2 0.8 200 chr2L 5789983 intron CG9171 - chr2L 5790083 intron CG9171 - chr2L 5790183 intron CG9171 - chr2L_12_5790001 chr2L_5790001 RAL-849 341 chr2L 5806203 5806235 chr2L 5806356 5806388 8 153 21.5 25.0 23.2 0.3 185 chr2L 5806203 intron CG11034 + chr2L 5806296 intron CG11034 + chr2L 5806388 intron CG11034 + chr2L_8_5805001 chr2L_5805001 RAL-849 342 chr2L 5819608 5819688 chr2L 5819745 5819797 19 133 3.5 6.0 4.8 3.3 189 chr2L 5819608 intergenic not near genes chr2L 5819702 intergenic not near genes chr2L 5819797 intergenic not near genes chr2L_19_5815001 chr2L_5815001 RAL-849 343 chr2L 5820345 5820409 chr2L 5820551 5820615 6 204 12.5 20.5 16.5 0.3 270 chr2L 5820345 intergenic not near genes chr2L 5820480 intergenic not near genes chr2L 5820615 intergenic not near genes chr2L_6_5820001 chr2L_5820001 RAL-849 344 chr2L 5827671 5827734 chr2L 5836729 5836792 roo 18 9056 6.0 6.0 6.0 2.6 9121 chr2L 5827671 intron TrissinR + chr2L 5832232 intron TrissinR + chr2L 5836792 intron TrissinR + chr2L_18_5830001 chr2L_5830001 RAL-849 345 chr2L 5842254 5842327 chr2L 5842391 5842470 4 136 5.0 0.0 2.5 1.1 216 chr2L 5842254 intron TrissinR + chr2L 5842362 intron TrissinR + chr2L 5842470 intron TrissinR + chr2L_4_5840001 chr2L_5840001 RAL-849 346 chr2L 5847900 5847963 chr2L 5848085 5848148 13 185 17.5 11.5 14.5 0.8 248 chr2L 5847900 intron TrissinR + chr2L 5848024 intron TrissinR + chr2L 5848148 intron TrissinR + chr2L_13_5845001 chr2L_5845001 RAL-849 347 chr2L 5853668 5853745 chr2L 5853803 5853880 9 131 11.0 12.0 11.5 0.7 212 chr2L 5853668 intron TrissinR + chr2L 5853774 intron TrissinR + chr2L 5853880 intron TrissinR + chr2L_9_5850001 chr2L_5850001 RAL-849 348 chr2L 5866366 5866392 chr2L 5866511 5866537 6 145 21.0 8.5 14.8 0.4 171 chr2L 5866366 intron rau - chr2L 5866452 intron rau - chr2L 5866537 intron rau - chr2L_6_5865001 chr2L_5865001 RAL-849 349 chr2L 5895888 5895962 chr2L 5896028 5896102 21 137 5.0 9.5 7.2 2.6 214 chr2L 5895888 intergenic not near genes chr2L 5895995 intergenic not near genes chr2L 5896102 intergenic not near genes chr2L_21_5895001 chr2L_5895001 RAL-849 350 chr2L 5922321 5922468 chr2L 5922451 5922594 16 126 10.5 9.5 10.0 1.5 273 chr2L 5922321 3` UTR bchs + chr2L 5922458 3` UTR bchs + chr2L 5922594 3` UTR bchs + chr2L_16_5920001 chr2L_5920001 RAL-849 351 chr2L 5962231 5962305 chr2L 5962357 5962389 11 119 12.0 13.0 12.5 0.8 158 chr2L 5962231 intergenic not near genes chr2L 5962310 intergenic not near genes chr2L 5962389 intergenic not near genes chr2L_11_5960001 chr2L_5960001 RAL-849 352 chr2L 5989002 5989038 chr2L 5989128 5989134 8 122 24.5 10.5 17.5 0.4 132 chr2L 5989002 intergenic ifc +,lid - chr2L 5989068 intergenic ifc +,lid - chr2L 5989134 intergenic lid -,ifc + chr2L_8_5985001 chr2L_5985001 RAL-849 353 chr2L 5993279 5993289 chr2L 5993420 5993430 4 141 32.5 28.5 30.5 0.1 151 chr2L 5993279 exon lid - chr2L 5993354 intron lid - chr2L 5993430 intron lid - chr2L_4_5990001 chr2L_5990001 RAL-849 354 chr2L 5993290 5993349 chr2L 5993419 5993490 14 139 25.0 28.0 26.5 0.5 200 chr2L 5993290 exon lid - chr2L 5993390 intron lid - chr2L 5993490 exon lid - chr2L_14_5990001 chr2L_5990001 RAL-849 355 chr2L 5994871 5994948 chr2L 5994999 5995076 8 127 7.0 9.5 8.2 0.9 205 chr2L 5994871 exon lid - chr2L 5994974 intron lid - chr2L 5995076 exon lid - chr2L_8_5990001 chr2L_5990001 RAL-849 356 chr2L 6015247 6015268 chr2L 6015572 6015588 8 321 47.5 50.5 49.0 0.2 341 chr2L 6015247 intron H2.0 - chr2L 6015418 intron H2.0 - chr2L 6015588 intron H2.0 - chr2L_8_6015001 chr2L_6015001 RAL-849 357 chr2L 6015244 6015319 chr2L 6015590 6015639 21 324 51.5 46.0 48.8 0.4 395 chr2L 6015244 intron H2.0 - chr2L 6015442 intron H2.0 - chr2L 6015639 intron H2.0 - chr2L_21_6015001 chr2L_6015001 RAL-849 358 chr2L 6018188 6018335 chr2L 6018317 6018508 25 162 14.5 16.0 15.2 1.5 320 chr2L 6018188 intron H2.0 - chr2L 6018348 intron H2.0 - chr2L 6018508 intron H2.0 - chr2L_25_6015001 chr2L_6015001 RAL-849 359 chr2L 6075038 6075069 chr2L 6075180 6075211 10 142 3.5 0.0 1.8 3.6 173 chr2L 6075038 intergenic CR43801 - chr2L 6075124 intergenic CR43801 - chr2L 6075211 intergenic CR43801 - chr2L_10_6075001 chr2L_6075001 RAL-849 360 chr2L 6096518 6096555 chr2L 6096666 6096703 10 148 12.0 12.0 12.0 0.8 185 chr2L 6096518 intergenic Kr-h1 +,CG45075 +,CG9175 - chr2L 6096610 intergenic CG9175 -,Kr-h1 +,CG45075 + chr2L 6096703 3` UTR CG9175 - chr2L_10_6095001 chr2L_6095001 RAL-849 361 chr2L 6121427 6121503 chr2L 6121578 6121654 11 150 15.0 16.0 15.5 0.7 227 chr2L 6121427 intron stai + chr2L 6121540 intron stai + chr2L 6121654 intron stai + chr2L_11_6120001 chr2L_6120001 RAL-849 362 chr2L 6130721 6130775 chr2L 6130856 6130909 8 134 18.0 8.0 13.0 0.6 188 chr2L 6130721 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130815 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130909 intergenic CG9222 +,CG42730 -,tectonic - chr2L_8_6130001 chr2L_6130001 RAL-849 363 chr2L 6136502 6136578 chr2L 6136649 6136725 7 147 18.5 10.5 14.5 0.5 223 chr2L 6136502 intergenic not near genes chr2L 6136614 intergenic not near genes chr2L 6136725 intergenic not near genes chr2L_7_6135001 chr2L_6135001 RAL-849 364 chr2L 6137724 6137789 chr2L 6137863 6137935 4 141 9.0 12.5 10.8 0.3 211 chr2L 6137724 intergenic not near genes chr2L 6137830 intergenic not near genes chr2L 6137935 intergenic not near genes chr2L_4_6135001 chr2L_6135001 RAL-849 365 chr2L 6153659 6153716 chr2L 6153805 6153862 15 146 16.0 16.5 16.2 0.9 203 chr2L 6153659 3` UTR Muc26B + chr2L 6153760 intergenic Muc26B +,CG31639 - chr2L 6153862 3` UTR CG31639 - chr2L_15_6150001 chr2L_6150001 RAL-849 366 chr2L 6199958 6200012 chr2L 6200159 6200213 8 198 21.0 24.0 22.5 0.3 255 chr2L 6199958 intron CG34380 + chr2L 6200086 intron CG34380 + chr2L 6200213 intron CG34380 + chr2L_8_6200001 chr2L_6200001 RAL-849 367 chr2L 6227353 6227387 chr2L 6227484 6227518 6 131 7.5 9.5 8.5 0.6 165 chr2L 6227353 intergenic not near genes chr2L 6227436 intergenic not near genes chr2L 6227518 intergenic not near genes chr2L_6_6225001 chr2L_6225001 RAL-849 368 chr2L 6261920 6261986 chr2L 6262046 6262112 21 124 11.5 11.0 11.2 1.7 192 chr2L 6261920 intron Ddr + chr2L 6262016 intron Ddr + chr2L 6262112 intron Ddr + chr2L_21_6260001 chr2L_6260001 RAL-849 369 chr2L 6268470 6268528 chr2L 6268606 6268664 11 136 17.0 10.0 13.5 0.8 194 chr2L 6268470 intron Ddr + chr2L 6268567 intron Ddr + chr2L 6268664 intron Ddr + chr2L_11_6265001 chr2L_6265001 RAL-849 370 chr2L 6283896 6283975 chr2L 6284057 6284137 15 158 5.0 0.0 2.5 4.3 241 chr2L 6283896 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284137 intron Ddr + chr2L_15_6280001 chr2L_6280001 RAL-849 371 chr2L 6286340 6286416 chr2L 6286484 6286560 18 142 18.0 15.0 16.5 1.0 220 chr2L 6286340 intron Ddr + chr2L 6286450 intron Ddr + chr2L 6286560 intron Ddr + chr2L_18_6285001 chr2L_6285001 RAL-849 372 chr2L 6300532 6300570 chr2L 6300643 6300706 5 131 20.5 22.5 21.5 0.2 174 chr2L 6300532 intron Ddr + chr2L 6300619 intron Ddr + chr2L 6300706 intron Ddr + chr2L_5_6300001 chr2L_6300001 RAL-849 373 chr2L 6318714 6318759 chr2L 6318918 6318963 12 204 25.0 25.5 25.2 0.5 249 chr2L 6318714 intron Ddr + chr2L 6318838 intron Ddr + chr2L 6318963 intron Ddr + chr2L_12_6315001 chr2L_6315001 RAL-849 374 chr2L 6349028 6349075 chr2L 6349156 6349203 17 128 8.0 6.5 7.2 2.1 175 chr2L 6349028 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349203 intergenic CG9498 - chr2L_17_6345001 chr2L_6345001 RAL-849 375 chr2L 6361161 6361233 chr2L 6361291 6361368 16 133 18.0 17.5 17.8 0.9 207 chr2L 6361161 5` UTR CR44778 + chr2L 6361264 5` UTR CR44778 + chr2L 6361368 5` UTR CR44778 + chr2L_16_6360001 chr2L_6360001 RAL-849 376 chr2L 6363110 6363177 chr2L 6366086 6366153 Burdock 37 2974 3.5 4.0 3.8 7.7 3043 chr2L 6363110 intergenic not near genes chr2L 6364632 intergenic not near genes chr2L 6366153 intergenic not near genes chr2L_37_6360001 chr2L_6360001 RAL-849 377 chr2L 6371635 6371708 chr2L 6371763 6371836 17 124 17.5 17.5 17.5 0.9 201 chr2L 6371635 intergenic not near genes chr2L 6371736 intergenic not near genes chr2L 6371836 intergenic not near genes chr2L_17_6370001 chr2L_6370001 RAL-849 378 chr2L 6380203 6380274 chr2L 6380343 6380410 4 139 14.5 6.0 10.2 0.4 207 chr2L 6380203 intron CG42368 - chr2L 6380306 intron CG42368 - chr2L 6380410 intron CG42368 - chr2L_4_6380001 chr2L_6380001 RAL-849 379 chr2L 6387967 6388019 chr2L 6388096 6388131 9 127 10.5 10.0 10.2 0.8 164 chr2L 6387967 intron CG42368 - chr2L 6388049 intron CG42368 - chr2L 6388131 intron CG42368 - chr2L_9_6385001 chr2L_6385001 RAL-849 380 chr2L 6414699 6414762 chr2L 6414829 6414892 11 126 7.5 12.0 9.8 1.0 193 chr2L 6414699 3` UTR CG13982 + chr2L 6414796 3` UTR CG13982 + chr2L 6414892 3` UTR CG13982 + chr2L_11_6410001 chr2L_6410001 RAL-849 381 chr2L 6426810 6426878 chr2L 6445120 6445179 roo 23 18309 9.0 8.5 8.8 2.3 18369 chr2L 6426810 3` UTR CG9527 - chr2L 6435994 intron CG9527 - chr2L 6445179 exon CG9527 - chr2L_23_6435001 chr2L_6435001 RAL-849 382 chr2L 6483906 6483931 chr2L 6484125 6484126 10 217 5.5 20.5 13.0 0.7 220 chr2L 6483906 exon DLP + chr2L 6484016 exon DLP + chr2L 6484126 exon DLP + chr2L_10_6480001 chr2L_6480001 RAL-849 383 chr2L 6504922 6504992 chr2L 6505061 6505131 18 139 14.0 10.5 12.2 1.4 209 chr2L 6504922 intron CG31637 + chr2L 6505026 intron CG31637 + chr2L 6505131 intron CG31637 + chr2L_18_6505001 chr2L_6505001 RAL-849 384 chr2L 6514123 6514146 chr2L 6514206 6514264 7 111 8.5 11.0 9.8 0.6 141 chr2L 6514123 intron CG31637 + chr2L 6514194 intron CG31637 + chr2L 6514264 intron CG31637 + chr2L_7_6510001 chr2L_6510001 RAL-849 385 chr2L 6537100 6537134 chr2L 6537228 6537262 9 128 23.0 12.5 17.8 0.5 162 chr2L 6537100 intron eya - chr2L 6537181 intron eya - chr2L 6537262 intron eya - chr2L_9_6535001 chr2L_6535001 RAL-849 386 chr2L 6544320 6544394 chr2L 6544462 6544536 15 139 2.0 2.5 2.2 4.7 216 chr2L 6544320 intron eya - chr2L 6544428 intron eya - chr2L 6544536 intron eya - chr2L_15_6540001 chr2L_6540001 RAL-849 387 chr2L 6564840 6564865 chr2L 6564962 6565007 5 138 16.5 18.0 17.2 0.3 167 chr2L 6564840 3` UTR CG13766 - chr2L 6564924 3` UTR CG13766 - chr2L 6565007 3` UTR CG13766 - chr2L_5_6560001 chr2L_6560001 RAL-849 388 chr2L 6571498 6571565 chr2L 6571631 6571698 11 133 23.0 20.0 21.5 0.5 200 chr2L 6571498 3` UTR CG11319 - chr2L 6571598 3` UTR CG11319 - chr2L 6571698 3` UTR CG11319 - chr2L_11_6570001 chr2L_6570001 RAL-849 389 chr2L 6583338 6583385 chr2L 6583616 6583663 5 278 7.5 16.0 11.8 0.4 325 chr2L 6583338 intron CG11319 - chr2L 6583500 intron CG11319 - chr2L 6583663 intron CG11319 - chr2L_5_6580001 chr2L_6580001 RAL-849 390 chr2L 6590049 6590116 chr2L 6590177 6590244 13 125 43.0 26.0 34.5 0.4 195 chr2L 6590049 intron CG11319 - chr2L 6590146 intron CG11319 - chr2L 6590244 intron CG11319 - chr2L_13_6590001 chr2L_6590001 RAL-849 391 chr2L 6590016 6590055 chr2L 6590985 6591025 4 969 36.5 27.0 31.8 0.1 1009 chr2L 6590016 intron CG11319 - chr2L 6590520 intron CG11319 - chr2L 6591025 intron CG11319 - chr2L_4_6590001 chr2L_6590001 RAL-849 392 chr2L 6605554 6605624 chr2L 6605685 6605755 16 131 16.0 17.0 16.5 0.9 201 chr2L 6605554 intergenic not near genes chr2L 6605654 intergenic not near genes chr2L 6605755 intergenic not near genes chr2L_16_6605001 chr2L_6605001 RAL-849 393 chr2L 6612024 6612076 chr2L 6612294 6612346 10 270 41.5 29.5 35.5 0.3 322 chr2L 6612024 intron CG11050 + chr2L 6612185 intron CG11050 + chr2L 6612346 intron CG11050 + chr2L_10_6610001 chr2L_6610001 RAL-849 394 chr2L 6640870 6640927 chr2L 6641006 6641072 13 144 31.0 24.0 27.5 0.5 202 chr2L 6640870 exon CG31635 - chr2L 6640971 intron CG31635 - chr2L 6641072 intron CG31635 - chr2L_13_6640001 chr2L_6640001 RAL-849 395 chr2L 6738649 6738725 chr2L 6738778 6738849 16 127 19.5 22.0 20.8 0.7 200 chr2L 6738649 intron TTLL3A - chr2L 6738749 intron TTLL3A - chr2L 6738849 exon TTLL3A - chr2L_16_6735001 chr2L_6735001 RAL-849 396 chr2L 6740692 6740747 chr2L 6740829 6740884 7 137 0.0 14.0 7.0 0.9 192 chr2L 6740692 intergenic not near genes chr2L 6740788 intergenic not near genes chr2L 6740884 intergenic not near genes chr2L_7_6740001 chr2L_6740001 RAL-849 397 chr2L 6771531 6771559 chr2L 6771693 6771721 9 162 3.5 0.0 1.8 3.2 190 chr2L 6771531 intron CG11321 - chr2L 6771626 intron CG11321 - chr2L 6771721 intron CG11321 - chr2L_9_6770001 chr2L_6770001 RAL-849 398 chr2L 6771948 6772017 chr2L 6772080 6772148 8 124 24.0 24.5 24.2 0.3 200 chr2L 6771948 intron CG11321 - chr2L 6772048 intron CG11321 - chr2L 6772148 intron CG11321 - chr2L_8_6770001 chr2L_6770001 RAL-849 399 chr2L 6772561 6772595 chr2L 6772678 6772712 4 122 8.5 12.5 10.5 0.3 151 chr2L 6772561 5` UTR CG11321 - chr2L 6772636 5` UTR CG11321 - chr2L 6772712 5` UTR CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-849 400 chr2L 6798074 6798138 chr2L 6798203 6798272 13 131 28.5 24.5 26.5 0.5 198 chr2L 6798074 intron nrv2 - chr2L 6798173 intron nrv2 - chr2L 6798272 5` UTR nrv2 - chr2L_13_6795001 chr2L_6795001 RAL-849 401 chr2L 6798899 6798974 chr2L 6799047 6799123 14 149 14.0 11.5 12.8 1.0 224 chr2L 6798899 intergenic nrv2 -,CR43610 + chr2L 6799011 intergenic nrv2 -,CR43610 + chr2L 6799123 intergenic CR43610 +,nrv2 - chr2L_14_6795001 chr2L_6795001 RAL-849 402 chr2L 6799491 6799523 chr2L 6799629 6799661 5 138 19.0 16.5 17.8 0.3 170 chr2L 6799491 5` UTR CR43610 + chr2L 6799576 5` UTR CR43610 + chr2L 6799661 intergenic CR43610 +,CG17376 - chr2L_5_6795001 chr2L_6795001 RAL-849 403 chr2L 6804324 6804386 chr2L 6804454 6804516 5 130 8.0 13.0 10.5 0.4 192 chr2L 6804324 3` UTR,3` UTR CG11236 +,CG17375 - chr2L 6804420 3` UTR CG17375 - chr2L 6804516 3` UTR CG17375 - chr2L_5_6800001 chr2L_6800001 RAL-849 404 chr2L 6850353 6850418 chr2L 6850509 6850574 10 156 11.0 11.0 11.0 0.8 221 chr2L 6850353 intergenic not near genes chr2L 6850464 intergenic not near genes chr2L 6850574 intergenic not near genes chr2L_10_6850001 chr2L_6850001 RAL-849 405 chr2L 6876755 6876773 chr2L 6882996 6883014 diver 7 6239 15.0 6.0 10.5 0.6 6259 chr2L 6876755 intron Nlg2 + chr2L 6879884 intron Nlg2 + chr2L 6883014 intron Nlg2 + chr2L_7_6875001 chr2L_6875001 RAL-849 406 chr2L 6876778 6876807 chr2L 6882971 6883005 diver 9 6218 8.0 6.0 7.0 1.1 6227 chr2L 6876778 intron Nlg2 + chr2L 6879892 intron Nlg2 + chr2L 6883005 intron Nlg2 + chr2L_9_6875001 chr2L_6875001 RAL-849 407 chr2L 6883698 6883776 chr2L 6883834 6883852 9 122 14.5 18.5 16.5 0.5 154 chr2L 6883698 intron Nlg2 + chr2L 6883775 intron Nlg2 + chr2L 6883852 intron Nlg2 + chr2L_9_6880001 chr2L_6880001 RAL-849 408 chr2L 6891399 6891471 chr2L 6891547 6891620 27 146 4.0 4.0 4.0 5.4 221 chr2L 6891399 intron Nlg2 + chr2L 6891510 intron Nlg2 + chr2L 6891620 intron Nlg2 + chr2L_27_6890001 chr2L_6890001 RAL-849 409 chr2L 6965930 6966018 chr2L 6966168 6966227 7 226 5.5 18.0 11.8 0.5 297 chr2L 6965930 intergenic Coprox + chr2L 6966078 intergenic Coprox + chr2L 6966227 intergenic Coprox + chr2L_7_6965001 chr2L_6965001 RAL-849 410 chr2L 6991381 6991425 chr2L 6998552 6998596 HMS-Beagle 11 7172 6.0 4.5 5.2 1.8 7215 chr2L 6991381 intron uif - chr2L 6994988 intron uif - chr2L 6998596 intron uif - chr2L_11_6990001 chr2L_6990001 RAL-849 411 chr2L 7041233 7041285 chr2L 7041372 7041424 16 139 12.0 16.5 14.2 1.1 191 chr2L 7041233 intron milt + chr2L 7041328 intron milt + chr2L 7041424 intron milt + chr2L_16_7040001 chr2L_7040001 RAL-849 412 chr2L 7051086 7051150 chr2L 7051228 7051276 4 134 4.0 5.5 4.8 0.7 190 chr2L 7051086 intron milt + chr2L 7051181 intron milt + chr2L 7051276 intron milt + chr2L_4_7050001 chr2L_7050001 RAL-849 413 chr2L 7081659 7081710 chr2L 7081790 7081841 7 131 16.5 12.0 14.2 0.5 182 chr2L 7081659 intron Pvf2 - chr2L 7081750 intron Pvf2 - chr2L 7081841 intron Pvf2 - chr2L_7_7080001 chr2L_7080001 RAL-849 414 chr2L 7084299 7084366 chr2L 7084441 7084508 14 142 18.5 18.5 18.5 0.7 209 chr2L 7084299 intron Pvf2 - chr2L 7084404 intron Pvf2 - chr2L 7084508 5` UTR Pvf2 - chr2L_14_7080001 chr2L_7080001 RAL-849 415 chr2L 7095876 7095904 chr2L 7096009 7096037 10 133 17.0 8.5 12.8 0.7 161 chr2L 7095876 intergenic not near genes chr2L 7095956 intergenic not near genes chr2L 7096037 intergenic not near genes chr2L_10_7095001 chr2L_7095001 RAL-849 416 chr2L 7100938 7101007 chr2L 7101214 7101256 13 274 12.5 23.0 17.8 0.7 318 chr2L 7100938 intron Pvf3 - chr2L 7101097 intron Pvf3 - chr2L 7101256 intron Pvf3 - chr2L_13_7100001 chr2L_7100001 RAL-849 417 chr2L 7101674 7101747 chr2L 7101812 7101884 10 138 23.0 15.0 19.0 0.5 210 chr2L 7101674 intron Pvf3 - chr2L 7101779 intron Pvf3 - chr2L 7101884 intron Pvf3 - chr2L_10_7100001 chr2L_7100001 RAL-849 418 chr2L 7107525 7107599 chr2L 7107668 7107739 11 135 11.5 16.0 13.8 0.7 214 chr2L 7107525 exon Pvf3 - chr2L 7107632 intron Pvf3 - chr2L 7107739 intron Pvf3 - chr2L_11_7105001 chr2L_7105001 RAL-849 419 chr2L 7111717 7111792 chr2L 7111852 7111927 16 132 4.5 0.0 2.2 5.0 210 chr2L 7111717 intron Pvf3 - chr2L 7111822 intron Pvf3 - chr2L 7111927 intron Pvf3 - chr2L_16_7110001 chr2L_7110001 RAL-849 420 chr2L 7120563 7120587 chr2L 7120697 7120721 5 134 7.5 17.0 12.2 0.4 158 chr2L 7120563 intron Pvf3 - chr2L 7120642 intron Pvf3 - chr2L 7120721 intron Pvf3 - chr2L_5_7120001 chr2L_7120001 RAL-849 421 chr2L 7125745 7125807 chr2L 7125911 7125973 17 166 9.5 6.0 7.8 1.9 228 chr2L 7125745 intron Pvf3 - chr2L 7125859 intron Pvf3 - chr2L 7125973 intron Pvf3 - chr2L_17_7125001 chr2L_7125001 RAL-849 422 chr2L 7140640 7140673 chr2L 7140763 7140799 9 132 17.5 24.5 21.0 0.4 159 chr2L 7140640 intron Pvf3 - chr2L 7140720 intron Pvf3 - chr2L 7140799 intron Pvf3 - chr2L_9_7140001 chr2L_7140001 RAL-849 423 chr2L 7164551 7164595 chr2L 7164686 7164730 11 135 4.5 6.0 5.2 1.8 179 chr2L 7164551 intergenic not near genes chr2L 7164640 intergenic not near genes chr2L 7164730 intergenic not near genes chr2L_11_7160001 chr2L_7160001 RAL-849 424 chr2L 7197951 7198020 chr2L 7198080 7198149 14 129 6.0 9.0 7.5 1.6 198 chr2L 7197951 intron CG4502 - chr2L 7198050 intron CG4502 - chr2L 7198149 intron CG4502 - chr2L_14_7195001 chr2L_7195001 RAL-849 425 chr2L 7216799 7216839 chr2L 7216925 7216965 11 126 18.5 16.5 17.5 0.6 166 chr2L 7216799 intron CG13784 - chr2L 7216882 intron CG13784 - chr2L 7216965 intron CG13784 - chr2L_11_7215001 chr2L_7215001 RAL-849 426 chr2L 7282515 7282570 chr2L 7282644 7282659 7 121 28.5 23.0 25.8 0.3 144 chr2L 7282515 intergenic not near genes chr2L 7282587 intergenic not near genes chr2L 7282659 intergenic not near genes chr2L_7_7280001 chr2L_7280001 RAL-849 427 chr2L 7295977 7296006 chr2L 7296167 7296196 5 190 21.5 21.0 21.2 0.2 219 chr2L 7295977 intergenic not near genes chr2L 7296086 intergenic not near genes chr2L 7296196 intergenic not near genes chr2L_5_7295001 chr2L_7295001 RAL-849 428 chr2L 7335159 7335232 chr2L 7335306 7335379 20 147 3.0 4.5 3.8 4.2 220 chr2L 7335159 intron Wnt6 + chr2L 7335269 intron Wnt6 + chr2L 7335379 intron Wnt6 + chr2L_20_7335001 chr2L_7335001 RAL-849 429 chr2L 7343287 7343347 chr2L 7350452 7350483 roo 11 7158 11.0 14.5 12.8 0.8 7196 chr2L 7343287 intron Wnt6 + chr2L 7346885 intron Wnt6 + chr2L 7350483 intron Wnt6 + chr2L_11_7345001 chr2L_7345001 RAL-849 430 chr2L 7363495 7363517 chr2L 7363623 7363645 9 128 15.0 6.0 10.5 0.8 150 chr2L 7363495 5` UTR Wnt10 + chr2L 7363570 5` UTR Wnt10 + chr2L 7363645 5` UTR Wnt10 + chr2L_9_7360001 chr2L_7360001 RAL-849 431 chr2L 7376124 7376157 chr2L 7376300 7376351 6 188 11.0 22.5 16.8 0.3 227 chr2L 7376124 intron Wnt10 + chr2L 7376238 intron Wnt10 + chr2L 7376351 intron Wnt10 + chr2L_6_7375001 chr2L_7375001 RAL-849 432 chr2L 7377840 7377899 chr2L 7377987 7378046 7 147 15.0 13.5 14.2 0.5 206 chr2L 7377840 5` UTR ninaC + chr2L 7377943 intron ninaC + chr2L 7378046 intron ninaC + chr2L_7_7375001 chr2L_7375001 RAL-849 433 chr2L 7406963 7406972 chr2L 7407119 7407129 5 157 0.0 0.0 0.0 5.0 166 chr2L 7406963 intron CG5177 + chr2L 7407046 intron CG5177 + chr2L 7407129 intron CG5177 + chr2L_5_7405001 chr2L_7405001 RAL-849 434 chr2L 7410662 7410675 chr2L 7410807 7410820 7 145 0.0 17.5 8.8 0.7 158 chr2L 7410662 intergenic CG15818 + chr2L 7410741 intergenic CG15818 + chr2L 7410820 intergenic CG15818 + chr2L_7_7410001 chr2L_7410001 RAL-849 435 chr2L 7436155 7436213 chr2L 7436295 7436353 22 139 11.5 9.5 10.5 1.9 198 chr2L 7436155 intergenic not near genes chr2L 7436254 intergenic not near genes chr2L 7436353 intergenic not near genes chr2L_22_7435001 chr2L_7435001 RAL-849 436 chr2L 7454628 7454662 chr2L 7454792 7454826 4 164 18.5 18.0 18.2 0.2 198 chr2L 7454628 intergenic Gr28b -,Gr28a - chr2L 7454727 intergenic Gr28b - chr2L 7454826 3` UTR Gr28b - chr2L_4_7450001 chr2L_7450001 RAL-849 437 chr2L 5904540 5904541 chr2L 7466149 7466149 12 1561609 21.5 7.0 14.2 0.8 1561609 chr2L 5904540 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466149 intergenic CG6055 + chr2L_12_6685001 chr2L_6685001 RAL-849 438 chr2L 5904541 5904541 chr2L 7466150 7466150 4 1561609 21.5 7.0 14.2 0.3 1561609 chr2L 5904541 intron CG9021 - chr2L 6685346 exon CG11327 - chr2L 7466150 intergenic CG6055 + chr2L_4_6685001 chr2L_6685001 RAL-849 439 chr2L 7512863 7512929 chr2L 7512994 7513060 19 131 20.5 17.0 18.8 1.0 197 chr2L 7512863 intron RapGAP1 - chr2L 7512962 intron RapGAP1 - chr2L 7513060 intron RapGAP1 - chr2L_19_7510001 chr2L_7510001 RAL-849 440 chr2L 7543839 7543898 chr2L 7543980 7544033 5 136 21.0 29.0 25.0 0.2 194 chr2L 7543839 intron RapGAP1 - chr2L 7543936 intron RapGAP1 - chr2L 7544033 intron RapGAP1 - chr2L_5_7540001 chr2L_7540001 RAL-849 441 chr2L 7548063 7548102 chr2L 7550557 7550598 Burdock 4 2494 6.0 5.5 5.8 0.6 2535 chr2L 7548063 intron RapGAP1 - chr2L 7549330 intron RapGAP1 - chr2L 7550598 intron RapGAP1 - chr2L_4_7545001 chr2L_7545001 RAL-849 442 chr2L 7555195 7555233 chr2L 7555322 7555360 7 127 11.5 27.0 19.2 0.3 165 chr2L 7555195 intron RapGAP1 - chr2L 7555278 intron RapGAP1 - chr2L 7555360 intron RapGAP1 - chr2L_7_7555001 chr2L_7555001 RAL-849 443 chr2L 7562138 7562178 chr2L 7562268 7562308 6 130 7.0 10.0 8.5 0.6 170 chr2L 7562138 intron RapGAP1 - chr2L 7562223 intron RapGAP1 - chr2L 7562308 intron RapGAP1 - chr2L_6_7560001 chr2L_7560001 RAL-849 444 chr2L 7568268 7568330 chr2L 7568395 7568457 14 127 20.0 21.5 20.8 0.6 189 chr2L 7568268 intron RapGAP1 - chr2L 7568362 intron RapGAP1 - chr2L 7568457 intron RapGAP1 - chr2L_14_7565001 chr2L_7565001 RAL-849 445 chr2L 7579154 7579182 chr2L 7579395 7579423 BS 4 241 12.5 6.0 9.2 0.4 269 chr2L 7579154 intergenic RapGAP1 - chr2L 7579288 intergenic RapGAP1 - chr2L 7579423 intergenic RapGAP1 - chr2L_4_7575001 chr2L_7575001 RAL-849 446 chr2L 7600795 7600834 chr2L 7600921 7600939 8 122 27.5 19.5 23.5 0.3 144 chr2L 7600795 intergenic not near genes chr2L 7600867 intergenic not near genes chr2L 7600939 intergenic not near genes chr2L_8_7600001 chr2L_7600001 RAL-849 447 chr2L 7602564 7602636 chr2L 7602693 7602765 10 129 9.5 11.0 10.2 0.9 201 chr2L 7602564 intergenic not near genes chr2L 7602664 intergenic not near genes chr2L 7602765 intergenic not near genes chr2L_10_7600001 chr2L_7600001 RAL-849 448 chr2L 7617792 7617809 chr2L 7617997 7618014 7 204 18.5 26.0 22.2 0.3 222 chr2L 7617792 intergenic not near genes chr2L 7617903 intergenic not near genes chr2L 7618014 intergenic not near genes chr2L_7_7615001 chr2L_7615001 RAL-849 449 chr2L 7633400 7633412 chr2L 7633546 7633558 5 146 19.5 14.0 16.8 0.3 158 chr2L 7633400 intergenic not near genes chr2L 7633479 intergenic not near genes chr2L 7633558 intergenic not near genes chr2L_5_7630001 chr2L_7630001 RAL-849 450 chr2L 7640374 7640421 chr2L 7640505 7640552 13 132 4.5 5.5 5.0 2.2 178 chr2L 7640374 intergenic not near genes chr2L 7640463 intergenic not near genes chr2L 7640552 intergenic not near genes chr2L_13_7640001 chr2L_7640001 RAL-849 451 chr2L 7664926 7664989 chr2L 7665063 7665125 4 136 1.0 1.0 1.0 2.0 199 chr2L 7664926 intron Slob - chr2L 7665026 intron Slob - chr2L 7665125 intron Slob - chr2L_4_7665001 chr2L_7665001 RAL-849 452 chr2L 7769761 7769819 chr2L 7769890 7769948 6 129 8.5 10.5 9.5 0.6 187 chr2L 7769761 intron CG7191 + chr2L 7769854 intron CG7191 + chr2L 7769948 intron CG7191 + chr2L_6_7765001 chr2L_7765001 RAL-849 453 chr2L 7781299 7781308 chr2L 7781436 7781445 4 137 14.0 18.5 16.2 0.2 146 chr2L 7781299 3` UTR Uro + chr2L 7781372 3` UTR Uro + chr2L 7781445 intergenic CG7164 +,Uro + chr2L_4_7780001 chr2L_7780001 RAL-849 454 chr2L 7839530 7839570 chr2L 7839681 7839731 6 153 11.0 1.5 6.2 0.8 201 chr2L 7839530 intergenic not near genes chr2L 7839630 intergenic not near genes chr2L 7839731 intergenic not near genes chr2L_6_7835001 chr2L_7835001 RAL-849 455 chr2L 7854211 7854277 chr2L 7854338 7854404 6 127 13.5 18.0 15.8 0.4 193 chr2L 7854211 intron CG14535 - chr2L 7854308 intron CG14535 - chr2L 7854404 intron CG14535 - chr2L_6_7850001 chr2L_7850001 RAL-849 456 chr2L 7861274 7861328 chr2L 7861428 7861482 14 154 21.0 11.5 16.2 0.8 208 chr2L 7861274 intergenic TwdlE - chr2L 7861378 intergenic not near genes chr2L 7861482 intergenic not near genes chr2L_14_7860001 chr2L_7860001 RAL-849 457 chr2L 7867542 7867585 chr2L 7867686 7867729 9 144 7.0 6.0 6.5 1.2 187 chr2L 7867542 intron Proc - chr2L 7867636 intron Proc - chr2L 7867729 intron Proc - chr2L_9_7865001 chr2L_7865001 RAL-849 458 chr2L 7922696 7922766 chr2L 7922827 7922897 29 130 13.0 13.5 13.2 2.0 201 chr2L 7922696 intron Snoo - chr2L 7922796 intron Snoo - chr2L 7922897 intron Snoo - chr2L_29_7920001 chr2L_7920001 RAL-849 459 chr2L 7941150 7941196 chr2L 7941279 7941299 13 124 13.5 9.5 11.5 1.0 149 chr2L 7941150 intron Snoo - chr2L 7941224 intron Snoo - chr2L 7941299 intron Snoo - chr2L_13_7940001 chr2L_7940001 RAL-849 460 chr2L 7958995 7959073 chr2L 7960456 7960536 pogo 33 1462 6.0 5.5 5.8 4.9 1541 chr2L 7958995 intron Snoo - chr2L 7959766 intron Snoo - chr2L 7960536 intron Snoo - chr2L_33_7955001 chr2L_7955001 RAL-849 461 chr2L 7977063 7977098 chr2L 7984089 7984124 297 8 7025 9.0 12.0 10.5 0.7 7061 chr2L 7977063 intron Snoo - chr2L 7980594 intron Snoo - chr2L 7984124 intron,5` UTR Snoo -,CG7231 + chr2L_8_7980001 chr2L_7980001 RAL-849 462 chr2L 7984909 7984960 chr2L 7985086 7985138 15 178 0.5 9.5 5.0 2.5 229 chr2L 7984909 intron CG7231 + chr2L 7985024 intron CG7231 + chr2L 7985138 intron CG7231 + chr2L_15_7985001 chr2L_7985001 RAL-849 463 chr2L 7986870 7986912 chr2L 7987015 7987058 11 146 4.0 7.5 5.8 1.6 188 chr2L 7986870 3` UTR pes - chr2L 7986964 3` UTR pes - chr2L 7987058 3` UTR pes - chr2L_11_7985001 chr2L_7985001 RAL-849 464 chr2L 7996988 7997033 chr2L 7997138 7997183 10 150 19.0 10.0 14.5 0.6 195 chr2L 7996988 intron CG7227 - chr2L 7997086 intron CG7227 - chr2L 7997183 intron CG7227 - chr2L_10_7995001 chr2L_7995001 RAL-849 465 chr2L 7999742 7999774 chr2L 7999869 7999886 8 124 13.0 18.0 15.5 0.5 144 chr2L 7999742 intron Wwox - chr2L 7999814 3` UTR Wwox - chr2L 7999886 exon Wwox - chr2L_8_7995001 chr2L_7995001 RAL-849 466 chr2L 8002997 8003051 chr2L 8003129 8003183 9 132 2.5 8.5 5.5 1.4 186 chr2L 8002997 intron Wwox - chr2L 8003090 intron Wwox - chr2L 8003183 intron Wwox - chr2L_9_8000001 chr2L_8000001 RAL-849 467 chr2L 8013574 8013579 chr2L 8018829 8018834 copia 4 5255 14.0 0.0 7.0 0.5 5260 chr2L 8013574 intron Tg + chr2L 8016204 intron Tg + chr2L 8018834 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-849 468 chr2L 8013595 8013644 chr2L 8023581 8023630 copia 17 9985 4.5 4.5 4.5 3.1 10035 chr2L 8013595 intron Tg + chr2L 8018612 intron Tg + chr2L 8023630 intron Tg + chr2L_17_8015001 chr2L_8015001 RAL-849 469 chr2L 8044052 8044127 chr2L 8044181 8044256 31 129 11.5 12.0 11.8 2.4 204 chr2L 8044052 exon CG7466 + chr2L 8044154 intron CG7466 + chr2L 8044256 intron CG7466 + chr2L_31_8040001 chr2L_8040001 RAL-849 470 chr2L 8051675 8051695 chr2L 8051850 8051870 INE-1 4 175 10.0 15.0 12.5 0.3 195 chr2L 8051675 exon CG7466 + chr2L 8051772 intron CG7466 + chr2L 8051870 intron CG7466 + chr2L_4_8050001 chr2L_8050001 RAL-849 471 chr2L 8127985 8128008 chr2L 8128119 8128142 5 134 25.0 20.5 22.8 0.2 157 chr2L 8127985 intron CG8668 + chr2L 8128064 intron CG8668 + chr2L 8128142 intron CG8668 + chr2L_5_8125001 chr2L_8125001 RAL-849 472 chr2L 8128009 8128058 chr2L 8128117 8128141 21 128 21.0 20.5 20.8 1.0 132 chr2L 8128009 intron CG8668 + chr2L 8128075 intron CG8668 + chr2L 8128141 intron CG8668 + chr2L_21_8125001 chr2L_8125001 RAL-849 473 chr2L 8171113 8171286 chr2L 8171297 8171417 7 181 0.0 0.0 0.0 7.0 304 chr2L 8171113 intron Piezo + chr2L 8171265 intron Piezo + chr2L 8171417 intron Piezo + chr2L_7_8170001 chr2L_8170001 RAL-849 474 chr2L 8184886 8184946 chr2L 8185027 8185087 14 141 23.0 25.5 24.2 0.6 201 chr2L 8184886 intron Piezo + chr2L 8184986 intron Piezo + chr2L 8185087 intron Piezo + chr2L_14_8180001 chr2L_8180001 RAL-849 475 chr2L 8205566 8205618 chr2L 8205713 8205765 12 147 22.5 21.0 21.8 0.5 199 chr2L 8205566 3` UTR CR44120 - chr2L 8205666 intergenic CR44120 -,CR44121 -,CR44119 + chr2L 8205765 intergenic CR44121 -,CR44120 -,CG8419 +,CR44119 + chr2L_12_8205001 chr2L_8205001 RAL-849 476 chr2L 8244683 8244749 chr2L 8244855 8244921 9 172 5.0 1.5 3.2 2.1 238 chr2L 8244683 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244921 intron CG8086 - chr2L_9_8240001 chr2L_8240001 RAL-849 477 chr2L 8258125 8258162 chr2L 8258272 8258309 6 147 28.5 21.0 24.8 0.2 184 chr2L 8258125 intergenic Btk29A -,mir-2b-1 - chr2L 8258217 intergenic Btk29A -,mir-2b-1 - chr2L 8258309 intergenic Btk29A -,mir-2b-1 - chr2L_6_8255001 chr2L_8255001 RAL-849 478 chr2L 8271554 8271640 chr2L 8271695 8271766 7 128 8.0 9.5 8.8 0.7 212 chr2L 8271554 intron Btk29A - chr2L 8271660 intron Btk29A - chr2L 8271766 intron Btk29A - chr2L_7_8270001 chr2L_8270001 RAL-849 479 chr2L 8284917 8284944 chr2L 8285047 8285074 4 130 20.5 20.5 20.5 0.2 157 chr2L 8284917 intron Btk29A - chr2L 8284996 intron Btk29A - chr2L 8285074 intron Btk29A - chr2L_4_8280001 chr2L_8280001 RAL-849 480 chr2L 8291460 8291527 chr2L 8291637 8291716 12 186 21.5 23.0 22.2 0.5 256 chr2L 8291460 intron Btk29A - chr2L 8291588 intron Btk29A - chr2L 8291716 intron Btk29A - chr2L_12_8290001 chr2L_8290001 RAL-849 481 chr2L 8323646 8323704 chr2L 8323796 8323854 11 146 32.5 28.0 30.2 0.4 208 chr2L 8323646 intron CG7781 - chr2L 8323750 intron CG7781 - chr2L 8323854 intron CG7781 - chr2L_11_8320001 chr2L_8320001 RAL-849 482 chr2L 8330233 8330292 chr2L 8330368 8330427 6 135 5.5 1.5 3.5 1.3 194 chr2L 8330233 intron CG14275 + chr2L 8330330 intron CG14275 + chr2L 8330427 intron CG14275 + chr2L_6_8330001 chr2L_8330001 RAL-849 483 chr2L 8334210 8334279 chr2L 8334346 8334408 4 133 15.0 11.0 13.0 0.3 198 chr2L 8334210 intergenic not near genes chr2L 8334309 intergenic not near genes chr2L 8334408 intergenic not near genes chr2L_4_8330001 chr2L_8330001 RAL-849 484 chr2L 8336906 8336944 chr2L 8337035 8337073 7 127 4.5 20.0 12.2 0.5 167 chr2L 8336906 intergenic not near genes chr2L 8336990 intergenic not near genes chr2L 8337073 intergenic not near genes chr2L_7_8335001 chr2L_8335001 RAL-849 485 chr2L 8341810 8341872 chr2L 8341976 8342038 20 166 17.0 17.5 17.2 1.1 228 chr2L 8341810 3` UTR CG14274 + chr2L 8341924 3` UTR CG14274 + chr2L 8342038 3` UTR CG14274 + chr2L_20_8340001 chr2L_8340001 RAL-849 486 chr2L 8351521 8351579 chr2L 8351648 8351706 17 127 16.0 16.5 16.2 1.0 185 chr2L 8351521 intergenic CG7778 + chr2L 8351614 intergenic not near genes chr2L 8351706 intergenic Mur29B + chr2L_17_8350001 chr2L_8350001 RAL-849 487 chr2L 8417900 8417966 chr2L 8418043 8418109 19 143 13.0 16.0 14.5 1.2 209 chr2L 8417900 intron Akap200 + chr2L 8418004 intron Akap200 + chr2L 8418109 intron Akap200 + chr2L_19_8415001 chr2L_8415001 RAL-849 488 chr2L 8451820 8451860 chr2L 8451962 8452005 7 159 11.5 12.5 12.0 0.5 185 chr2L 8451820 5` UTR fu12 - chr2L 8451912 intron fu12 - chr2L 8452005 intron fu12 - chr2L_7_8450001 chr2L_8450001 RAL-849 489 chr2L 8452380 8452440 chr2L 8461601 8461661 roo 22 9220 13.0 8.5 10.8 1.9 9281 chr2L 8452380 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461661 intron fu12 - chr2L_22_8455001 chr2L_8455001 RAL-849 490 chr2L 8471785 8471798 chr2L 8471920 8471933 4 135 31.0 21.0 26.0 0.1 148 chr2L 8471785 intron d + chr2L 8471859 intron d + chr2L 8471933 intron d + chr2L_4_8470001 chr2L_8470001 RAL-849 491 chr2L 8498158 8498239 chr2L 8498289 8498370 25 131 4.0 6.0 5.0 4.2 212 chr2L 8498158 intron Dh31 - chr2L 8498264 intron Dh31 - chr2L 8498370 intron Dh31 - chr2L_25_8495001 chr2L_8495001 RAL-849 492 chr2L 8508785 8508990 chr2L 8509051 8509142 9 241 0.0 0.0 0.0 9.0 357 chr2L 8508785 intergenic CG13096 - chr2L 8508964 intergenic CG13096 - chr2L 8509142 3` UTR CG13096 - chr2L_9_8505001 chr2L_8505001 RAL-849 493 chr2L 8510095 8510167 chr2L 8510229 8510306 12 137 13.0 15.0 14.0 0.8 211 chr2L 8510095 exon CG13096 - chr2L 8510200 intron CG13096 - chr2L 8510306 intron CG13096 - chr2L_12_8510001 chr2L_8510001 RAL-849 494 chr2L 8521714 8521766 chr2L 8521849 8521901 8 135 19.5 18.0 18.8 0.4 187 chr2L 8521714 3` UTR CG13091 + chr2L 8521808 3` UTR CG13091 + chr2L 8521901 intergenic Acer +,CG13091 + chr2L_8_8520001 chr2L_8520001 RAL-849 495 chr2L 8552708 8552778 chr2L 8552850 8552890 19 138 16.5 15.5 16.0 1.1 182 chr2L 8552708 intron Sema-1a + chr2L 8552799 intron Sema-1a + chr2L 8552890 intron Sema-1a + chr2L_19_8550001 chr2L_8550001 RAL-849 496 chr2L 8594450 8594473 chr2L 8601554 8601577 297 5 7104 11.5 0.0 5.8 0.7 7127 chr2L 8594450 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598014 intron Sema-1a + chr2L 8601577 intron Sema-1a + chr2L_5_8595001 chr2L_8595001 RAL-849 497 chr2L 8607517 8607551 chr2L 8607656 8607701 8 145 15.0 16.0 15.5 0.5 184 chr2L 8607517 intron Sema-1a + chr2L 8607609 intron Sema-1a + chr2L 8607701 intron Sema-1a + chr2L_8_8605001 chr2L_8605001 RAL-849 498 chr2L 8612805 8612870 chr2L 8612932 8612997 42 127 13.5 11.0 12.2 3.2 192 chr2L 8612805 intron Sema-1a + chr2L 8612901 intron Sema-1a + chr2L 8612997 intron Sema-1a + chr2L_42_8610001 chr2L_8610001 RAL-849 499 chr2L 8629226 8629267 chr2L 8629354 8629395 10 128 20.0 18.5 19.2 0.5 169 chr2L 8629226 intron Sema-1a + chr2L 8629310 intron Sema-1a + chr2L 8629395 intron Sema-1a + chr2L_10_8625001 chr2L_8625001 RAL-849 500 chr2L 8654214 8654240 chr2L 8654355 8654391 4 145 19.0 18.0 18.5 0.2 177 chr2L 8654214 intron Sema-1a + chr2L 8654302 intron Sema-1a + chr2L 8654391 intron Sema-1a + chr2L_4_8650001 chr2L_8650001 RAL-849 501 chr2L 8687032 8687095 chr2L 8687186 8687249 9 154 16.5 14.5 15.5 0.5 217 chr2L 8687032 exon Trs23 + chr2L 8687140 intergenic Hnf4 -,Trs23 + chr2L 8687249 3` UTR Hnf4 - chr2L_9_8685001 chr2L_8685001 RAL-849 502 chr2L 8695768 8695842 chr2L 8695971 8696044 18 202 15.5 23.5 19.5 0.9 276 chr2L 8695768 intron Hnf4 - chr2L 8695906 intron Hnf4 - chr2L 8696044 intron Hnf4 - chr2L_18_8695001 chr2L_8695001 RAL-849 503 chr2L 8723072 8723138 chr2L 8731499 8731565 Tirant 37 8426 12.0 13.5 12.8 2.7 8493 chr2L 8723072 intron raw - chr2L 8727318 intron raw - chr2L 8731565 intron raw - chr2L_37_8725001 chr2L_8725001 RAL-849 504 chr2L 8799759 8799819 chr2L 8799925 8799949 23 161 6.0 7.0 6.5 3.1 190 chr2L 8799759 intergenic not near genes chr2L 8799854 intergenic not near genes chr2L 8799949 intergenic not near genes chr2L_23_8795001 chr2L_8795001 RAL-849 505 chr2L 8815350 8815390 chr2L 8815766 8815806 5 416 24.5 24.5 24.5 0.2 456 chr2L 8815350 intergenic not near genes chr2L 8815578 intergenic not near genes chr2L 8815806 intergenic not near genes chr2L_5_8815001 chr2L_8815001 RAL-849 506 chr2L 8815400 8815468 chr2L 8815533 8815561 32 163 7.0 8.5 7.8 3.6 161 chr2L 8815400 intergenic not near genes chr2L 8815480 intergenic not near genes chr2L 8815561 intergenic not near genes chr2L_32_8815001 chr2L_8815001 RAL-849 507 chr2L 8869448 8869473 chr2L 8869573 8869608 4 131 21.5 19.5 20.5 0.2 160 chr2L 8869448 intergenic not near genes chr2L 8869528 intergenic not near genes chr2L 8869608 intergenic not near genes chr2L_4_8865001 chr2L_8865001 RAL-849 508 chr2L 8875398 8875469 chr2L 8875526 8875597 9 128 13.5 9.5 11.5 0.7 199 chr2L 8875398 intergenic not near genes chr2L 8875498 intergenic not near genes chr2L 8875597 intergenic not near genes chr2L_9_8875001 chr2L_8875001 RAL-849 509 chr2L 8902411 8902474 chr2L 8902606 8902671 17 196 20.0 28.5 24.2 0.7 260 chr2L 8902411 intron CG34398 + chr2L 8902541 intron CG34398 + chr2L 8902671 intron CG34398 + chr2L_17_8900001 chr2L_8900001 RAL-849 510 chr2L 8910684 8910741 chr2L 8910815 8910882 5 139 17.5 16.0 16.8 0.3 198 chr2L 8910684 intron CG34398 + chr2L 8910783 intron CG34398 + chr2L 8910882 intron CG34398 + chr2L_5_8910001 chr2L_8910001 RAL-849 511 chr2L 8934041 8934100 chr2L 8934171 8934190 13 123 22.0 21.0 21.5 0.6 149 chr2L 8934041 5` UTR Tsp29Fa + chr2L 8934116 5` UTR Tsp29Fa + chr2L 8934190 5` UTR Tsp29Fa + chr2L_13_8930001 chr2L_8930001 RAL-849 512 chr2L 8939634 8939683 chr2L 8939764 8939813 12 130 20.0 19.5 19.8 0.6 179 chr2L 8939634 3` UTR Tsp29Fb + chr2L 8939724 3` UTR Tsp29Fb + chr2L 8939813 3` UTR CG9510 - chr2L_12_8935001 chr2L_8935001 RAL-849 513 chr2L 8956179 8956244 chr2L 8956306 8956376 17 129 4.5 3.5 4.0 3.4 197 chr2L 8956179 intron CG31886 - chr2L 8956278 intron CG31886 - chr2L 8956376 intron CG31886 - chr2L_17_8955001 chr2L_8955001 RAL-849 514 chr2L 8980417 8980487 chr2L 8980556 8980626 4 139 9.0 6.5 7.8 0.5 209 chr2L 8980417 intron CG13101 - chr2L 8980522 intron CG13101 - chr2L 8980626 intron CG13101 - chr2L_4_8980001 chr2L_8980001 RAL-849 515 chr2L 8985555 8985621 chr2L 8985771 8985837 13 215 13.5 12.0 12.8 0.9 282 chr2L 8985555 intergenic rost - chr2L 8985696 intergenic rost - chr2L 8985837 intergenic rost - chr2L_13_8985001 chr2L_8985001 RAL-849 516 chr2L 8994054 8994128 chr2L 8994199 8994264 21 143 23.0 23.5 23.2 0.9 210 chr2L 8994054 3` UTR alien - chr2L 8994159 3` UTR alien - chr2L 8994264 3` UTR alien - chr2L_21_8990001 chr2L_8990001 RAL-849 517 chr2L 9000239 9000299 chr2L 9007799 9007859 roo 26 7559 13.0 15.0 14.0 1.7 7620 chr2L 9000239 intergenic Try29F + chr2L 9004049 intergenic not near genes chr2L 9007859 intergenic not near genes chr2L_26_9000001 chr2L_9000001 RAL-849 518 chr2L 9025633 9025659 chr2L 9025879 9025905 6 245 11.0 34.5 22.8 0.3 272 chr2L 9025633 intron,3` UTR CG9582 -,CR44352 - chr2L 9025769 intron,3` UTR CG9582 -,CR44352 - chr2L 9025905 intron,3` UTR CG9582 -,CR44352 - chr2L_6_9025001 chr2L_9025001 RAL-849 519 chr2L 9025662 9025695 chr2L 9025872 9025877 5 222 13.0 32.0 22.5 0.2 215 chr2L 9025662 intron,3` UTR CG9582 -,CR44352 - chr2L 9025770 intron,3` UTR CG9582 -,CR44352 - chr2L 9025877 intron,3` UTR CG9582 -,CR44352 - chr2L_5_9025001 chr2L_9025001 RAL-849 520 chr2L 9030413 9030477 chr2L 9030541 9030606 19 129 24.0 23.0 23.5 0.8 193 chr2L 9030413 intron,intron CG9582 -,CR44352 - chr2L 9030510 intron,intron CG9582 -,CR44352 - chr2L 9030606 intron,intron CG9582 -,CR44352 - chr2L_19_9030001 chr2L_9030001 RAL-849 521 chr2L 9053358 9053430 chr2L 9053643 9053722 13 285 8.5 13.0 10.8 1.1 364 chr2L 9053358 exon CG31708 - chr2L 9053540 intron CG31708 - chr2L 9053722 intron CG31708 - chr2L_13_9050001 chr2L_9050001 RAL-849 522 chr2L 9068141 9068195 chr2L 9068253 9068322 12 126 10.0 13.0 11.5 1.0 181 chr2L 9068141 intron CG31708 - chr2L 9068232 intron CG31708 - chr2L 9068322 intron CG31708 - chr2L_12_9065001 chr2L_9065001 RAL-849 523 chr2L 9073222 9073292 chr2L 9073359 9073428 18 129 21.0 19.0 20.0 0.9 206 chr2L 9073222 intergenic not near genes chr2L 9073325 intergenic not near genes chr2L 9073428 intergenic not near genes chr2L_18_9070001 chr2L_9070001 RAL-849 524 chr2L 9084336 9084340 chr2L 16217660 16217660 16 7133321 30.5 30.0 30.2 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_16_12650001 chr2L_12650001 RAL-849 525 chr2L 9113751 9113791 chr2L 9113911 9113951 7 160 13.5 11.5 12.5 0.5 200 chr2L 9113751 intergenic Or30a + chr2L 9113851 intergenic not near genes chr2L 9113951 intergenic not near genes chr2L_7_9110001 chr2L_9110001 RAL-849 526 chr2L 9147092 9147115 chr2L 9147234 9147257 6 142 7.0 15.5 11.2 0.5 165 chr2L 9147092 intron CG32982 + chr2L 9147174 intron CG32982 + chr2L 9147257 intron CG32982 + chr2L_6_9145001 chr2L_9145001 RAL-849 527 chr2L 9158742 9158829 chr2L 9158889 9158979 12 146 4.5 0.0 2.2 3.8 237 chr2L 9158742 intron CG32982 + chr2L 9158860 intron CG32982 + chr2L 9158979 intron CG32982 + chr2L_12_9155001 chr2L_9155001 RAL-849 528 chr2L 9173026 9173075 chr2L 9173153 9173202 4 127 9.5 12.0 10.8 0.3 176 chr2L 9173026 intron tai + chr2L 9173114 intron tai + chr2L 9173202 intron tai + chr2L_4_9170001 chr2L_9170001 RAL-849 529 chr2L 9202024 9202042 chr2L 9202140 9202168 5 120 9.0 9.5 9.2 0.5 144 chr2L 9202024 intron tai + chr2L 9202096 intron tai + chr2L 9202168 intron tai + chr2L_5_9200001 chr2L_9200001 RAL-849 530 chr2L 9202044 9202083 chr2L 9202134 9202199 5 112 7.5 9.5 8.5 0.5 155 chr2L 9202044 intron tai + chr2L 9202122 intron tai + chr2L 9202199 intron tai + chr2L_5_9200001 chr2L_9200001 RAL-849 531 chr2L 9217934 9217979 chr2L 9222771 9222816 Doc 13 4837 5.5 9.0 7.2 1.6 4882 chr2L 9217934 intron tai + chr2L 9220375 intron tai + chr2L 9222816 intron tai + chr2L_13_9220001 chr2L_9220001 RAL-849 532 chr2L 9227178 9227403 chr2L 9227311 9227543 21 137 16.5 22.5 19.5 1.0 365 chr2L 9227178 intron tai + chr2L 9227360 intron tai + chr2L 9227543 intron tai + chr2L_21_9225001 chr2L_9225001 RAL-849 533 chr2L 9259190 9259241 chr2L 9259307 9259384 20 129 5.0 5.0 5.0 3.3 194 chr2L 9259190 intron Ggamma30A + chr2L 9259287 intron Ggamma30A + chr2L 9259384 intron Ggamma30A + chr2L_20_9255001 chr2L_9255001 RAL-849 534 chr2L 9279939 9280007 chr2L 9280083 9280151 6 144 18.0 16.0 17.0 0.3 212 chr2L 9279939 intron Ggamma30A + chr2L 9280045 intron Ggamma30A + chr2L 9280151 intron Ggamma30A + chr2L_6_9280001 chr2L_9280001 RAL-849 535 chr2L 9283155 9283166 chr2L 9283282 9283293 4 127 23.5 21.5 22.5 0.2 138 chr2L 9283155 intron Ggamma30A + chr2L 9283224 intron Ggamma30A + chr2L 9283293 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 RAL-849 536 chr2L 9290723 9290747 chr2L 9290850 9290872 6 126 17.0 11.5 14.2 0.4 149 chr2L 9290723 intron Ggamma30A + chr2L 9290798 intron Ggamma30A + chr2L 9290872 intron Ggamma30A + chr2L_6_9290001 chr2L_9290001 RAL-849 537 chr2L 9297336 9297392 chr2L 9297463 9297519 15 126 25.0 27.5 26.2 0.6 183 chr2L 9297336 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297519 3` UTR Ggamma30A + chr2L_15_9295001 chr2L_9295001 RAL-849 538 chr2L 9300661 9300698 chr2L 9300795 9300832 5 134 11.5 14.0 12.8 0.4 171 chr2L 9300661 3` UTR Ggamma30A + chr2L 9300746 3` UTR Ggamma30A + chr2L 9300832 3` UTR Ggamma30A + chr2L_5_9300001 chr2L_9300001 RAL-849 539 chr2L 9303408 9303495 chr2L 9303567 9303622 12 132 8.5 24.5 16.5 0.7 214 chr2L 9303408 intergenic not near genes chr2L 9303515 intergenic not near genes chr2L 9303622 intergenic not near genes chr2L_12_9300001 chr2L_9300001 RAL-849 540 chr2L 9314923 9314969 chr2L 9315057 9315101 13 134 13.5 10.0 11.8 1.0 178 chr2L 9314923 intergenic not near genes chr2L 9315012 intergenic not near genes chr2L 9315101 intergenic not near genes chr2L_13_9315001 chr2L_9315001 RAL-849 541 chr2L 9337862 9337898 chr2L 9337989 9338025 7 127 24.0 24.5 24.2 0.3 163 chr2L 9337862 intron Eaat1 + chr2L 9337944 intron Eaat1 + chr2L 9338025 intron Eaat1 + chr2L_7_9335001 chr2L_9335001 RAL-849 542 chr2L 9339340 9339396 chr2L 9339481 9339537 10 140 4.5 9.5 7.0 1.2 197 chr2L 9339340 intron Eaat1 + chr2L 9339438 intron Eaat1 + chr2L 9339537 exon Eaat1 + chr2L_10_9335001 chr2L_9335001 RAL-849 543 chr2L 9347571 9347591 chr2L 9347713 9347733 5 142 1.0 0.0 0.5 3.3 162 chr2L 9347571 intergenic not near genes chr2L 9347652 intergenic not near genes chr2L 9347733 intergenic not near genes chr2L_5_9345001 chr2L_9345001 RAL-849 544 chr2L 9354620 9354658 chr2L 9354800 9354840 7 181 24.0 21.0 22.5 0.3 220 chr2L 9354620 intergenic not near genes chr2L 9354730 intergenic not near genes chr2L 9354840 intergenic not near genes chr2L_7_9350001 chr2L_9350001 RAL-849 545 chr2L 9354659 9354688 chr2L 9354796 9354870 7 174 20.0 21.0 20.5 0.3 211 chr2L 9354659 intergenic not near genes chr2L 9354764 intergenic not near genes chr2L 9354870 intergenic not near genes chr2L_7_9350001 chr2L_9350001 RAL-849 546 chr2L 9355146 9355204 chr2L 9356146 9356204 9 1000 10.0 15.0 12.5 0.7 1058 chr2L 9355146 intergenic not near genes chr2L 9355675 intergenic not near genes chr2L 9356204 intergenic not near genes chr2L_9_9355001 chr2L_9355001 RAL-849 547 chr2L 9362102 9362153 chr2L 9362230 9362281 18 128 6.0 8.0 7.0 2.2 179 chr2L 9362102 intergenic not near genes chr2L 9362192 intergenic not near genes chr2L 9362281 intergenic not near genes chr2L_18_9360001 chr2L_9360001 RAL-849 548 chr2L 9367551 9367589 chr2L 9367677 9367715 5 126 6.0 11.0 8.5 0.5 164 chr2L 9367551 intergenic CG34181 + chr2L 9367633 intergenic CG34181 + chr2L 9367715 exon CG34181 + chr2L_5_9365001 chr2L_9365001 RAL-849 549 chr2L 9380195 9380226 chr2L 9380340 9380371 6 145 22.0 13.5 17.8 0.3 176 chr2L 9380195 exon Shawl - chr2L 9380283 intron Shawl - chr2L 9380371 intron Shawl - chr2L_6_9380001 chr2L_9380001 RAL-849 550 chr2L 9385075 9385134 chr2L 9385215 9385274 11 140 22.0 18.0 20.0 0.5 199 chr2L 9385075 intron Shawl - chr2L 9385174 intron Shawl - chr2L 9385274 intron Shawl - chr2L_11_9385001 chr2L_9385001 RAL-849 551 chr2L 9387211 9387275 chr2L 9387359 9387423 7 148 16.5 11.5 14.0 0.5 212 chr2L 9387211 intron Shawl - chr2L 9387317 intron Shawl - chr2L 9387423 intron,5` UTR Shawl -,Aldh + chr2L_7_9385001 chr2L_9385001 RAL-849 552 chr2L 9393457 9393472 chr2L 9396467 9396489 jockey 7 3016 19.0 9.0 14.0 0.5 3032 chr2L 9393457 intron Shawl - chr2L 9394973 intron Shawl - chr2L 9396489 intron Shawl - chr2L_7_9390001 chr2L_9390001 RAL-849 553 chr2L 9393480 9393519 chr2L 9396497 9396536 jockey 13 3016 8.5 15.5 12.0 1.0 3056 chr2L 9393480 intron Shawl - chr2L 9395008 intron Shawl - chr2L 9396536 intron Shawl - chr2L_13_9395001 chr2L_9395001 RAL-849 554 chr2L 9407861 9408148 chr2L 9407993 9408285 18 134 18.0 18.0 18.0 0.9 424 chr2L 9407861 intron Shawl - chr2L 9408073 intron Shawl - chr2L 9408285 intron Shawl - chr2L_18_9405001 chr2L_9405001 RAL-849 555 chr2L 9408157 9408173 chr2L 9408294 9408310 6 135 13.5 22.5 18.0 0.3 153 chr2L 9408157 intron Shawl - chr2L 9408234 intron Shawl - chr2L 9408310 intron Shawl - chr2L_6_9405001 chr2L_9405001 RAL-849 556 chr2L 9419976 9420000 chr2L 9420106 9420131 5 131 14.0 7.0 10.5 0.4 155 chr2L 9419976 intron Mco1 + chr2L 9420054 intron Mco1 + chr2L 9420131 intron Mco1 + chr2L_5_9420001 chr2L_9420001 RAL-849 557 chr2L 9423136 9423204 chr2L 9423264 9423332 10 128 17.5 21.5 19.5 0.5 196 chr2L 9423136 intron Mco1 + chr2L 9423234 intron Mco1 + chr2L 9423332 exon Mco1 + chr2L_10_9420001 chr2L_9420001 RAL-849 558 chr2L 9448907 9448919 chr2L 9449045 9449057 4 138 0.0 3.5 1.8 1.4 150 chr2L 9448907 intron numb + chr2L 9448982 intron numb + chr2L 9449057 intron numb + chr2L_4_9445001 chr2L_9445001 RAL-849 559 chr2L 9451002 9451068 chr2L 9451155 9451212 5 149 7.0 12.5 9.8 0.5 210 chr2L 9451002 intron numb + chr2L 9451107 intron numb + chr2L 9451212 intron numb + chr2L_5_9450001 chr2L_9450001 RAL-849 560 chr2L 9454930 9455002 chr2L 9455082 9455129 16 145 21.0 22.5 21.8 0.7 199 chr2L 9454930 intron numb + chr2L 9455030 intron numb + chr2L 9455129 intron numb + chr2L_16_9455001 chr2L_9455001 RAL-849 561 chr2L 9456882 9456962 chr2L 9457013 9457093 23 131 4.5 9.5 7.0 2.9 211 chr2L 9456882 intron numb + chr2L 9456988 intron numb + chr2L 9457093 intron numb + chr2L_23_9455001 chr2L_9455001 RAL-849 562 chr2L 9460708 9460765 chr2L 9460844 9460910 8 139 15.5 6.0 10.8 0.7 202 chr2L 9460708 exon numb + chr2L 9460809 intron numb + chr2L 9460910 intron numb + chr2L_8_9460001 chr2L_9460001 RAL-849 563 chr2L 9463720 9463764 chr2L 9463855 9463899 9 135 4.0 5.0 4.5 1.6 179 chr2L 9463720 intergenic not near genes chr2L 9463810 intergenic not near genes chr2L 9463899 intergenic not near genes chr2L_9_9460001 chr2L_9460001 RAL-849 564 chr2L 9464804 9464967 chr2L 9464931 9465086 12 132 0.0 0.0 0.0 12.0 282 chr2L 9464804 intergenic not near genes chr2L 9464945 intergenic not near genes chr2L 9465086 intergenic not near genes chr2L_12_9460001 chr2L_9460001 RAL-849 565 chr2L 9474738 9474803 chr2L 9474882 9474945 10 143 13.5 15.0 14.2 0.7 207 chr2L 9474738 intergenic not near genes chr2L 9474842 intergenic not near genes chr2L 9474945 intergenic not near genes chr2L_10_9470001 chr2L_9470001 RAL-849 566 chr2L 9498321 9498381 chr2L 9498451 9498495 11 128 23.0 30.5 26.8 0.4 174 chr2L 9498321 intron CG33298 + chr2L 9498408 intron CG33298 + chr2L 9498495 intron CG33298 + chr2L_11_9495001 chr2L_9495001 RAL-849 567 chr2L 9526799 9526875 chr2L 9526941 9527017 26 141 21.0 20.0 20.5 1.2 218 chr2L 9526799 intron Oatp30B + chr2L 9526908 intron Oatp30B + chr2L 9527017 intron Oatp30B + chr2L_26_9525001 chr2L_9525001 RAL-849 568 chr2L 9527272 9527299 chr2L 9527404 9527431 6 132 9.5 8.0 8.8 0.6 159 chr2L 9527272 intron Oatp30B + chr2L 9527352 intron Oatp30B + chr2L 9527431 intron Oatp30B + chr2L_6_9525001 chr2L_9525001 RAL-849 569 chr2L 9529044 9529058 chr2L 9529206 9529218 4 160 10.0 10.5 10.2 0.4 174 chr2L 9529044 intron,exon Oatp30B +,CG31883 + chr2L 9529131 intron,exon Oatp30B +,CG31883 + chr2L 9529218 intron,exon Oatp30B +,CG31883 + chr2L_4_9525001 chr2L_9525001 RAL-849 570 chr2L 9532801 9532842 chr2L 9532966 9533007 19 164 29.0 30.0 29.5 0.6 206 chr2L 9532801 intron Oatp30B + chr2L 9532904 intron Oatp30B + chr2L 9533007 intron Oatp30B + chr2L_19_9530001 chr2L_9530001 RAL-849 571 chr2L 9542505 9542531 chr2L 9542638 9542664 6 140 0.0 8.0 4.0 1.2 159 chr2L 9542505 intergenic CG17855 +,Cpr30B + chr2L 9542584 intergenic CG17855 +,Cpr30B + chr2L 9542664 intergenic CG17855 +,Cpr30B + chr2L_6_9540001 chr2L_9540001 RAL-849 572 chr2L 9543727 9543783 chr2L 9543854 9543911 6 128 14.0 17.0 15.5 0.4 184 chr2L 9543727 intergenic Cpr30B +,CG13113 + chr2L 9543819 intergenic Cpr30B +,CG13113 + chr2L 9543911 intergenic Cpr30B +,CG13113 + chr2L_6_9540001 chr2L_9540001 RAL-849 573 chr2L 9565808 9565816 chr2L 9565944 9565952 4 136 29.5 28.0 28.8 0.1 144 chr2L 9565808 intron jp - chr2L 9565880 intron jp - chr2L 9565952 intron jp - chr2L_4_9565001 chr2L_9565001 RAL-849 574 chr2L 9565823 9565867 chr2L 9565939 9566003 12 134 21.5 25.5 23.5 0.5 180 chr2L 9565823 intron jp - chr2L 9565913 intron jp - chr2L 9566003 intron jp - chr2L_12_9565001 chr2L_9565001 RAL-849 575 chr2L 9601624 9601884 chr2L 9601763 9602014 15 135 4.5 4.0 4.2 2.9 390 chr2L 9601624 intergenic not near genes chr2L 9601819 intergenic not near genes chr2L 9602014 intergenic not near genes chr2L_15_9600001 chr2L_9600001 RAL-849 576 chr2L 9613793 9613850 chr2L 9614015 9614072 13 221 19.0 19.0 19.0 0.7 279 chr2L 9613793 intron Trx-2 + chr2L 9613932 intron Trx-2 + chr2L 9614072 intron Trx-2 + chr2L_13_9610001 chr2L_9610001 RAL-849 577 chr2L 9618844 9618905 chr2L 9618971 9619032 11 127 7.5 8.0 7.8 1.2 188 chr2L 9618844 intron GlcAT-S + chr2L 9618938 intron GlcAT-S + chr2L 9619032 intron GlcAT-S + chr2L_11_9615001 chr2L_9615001 RAL-849 578 chr2L 9685595 9685611 chr2L 9685722 9685738 6 127 6.0 15.5 10.8 0.5 143 chr2L 9685595 intron Pka-C1 - chr2L 9685666 intron Pka-C1 - chr2L 9685738 intron Pka-C1 - chr2L_6_9685001 chr2L_9685001 RAL-849 579 chr2L 9687887 9687954 chr2L 9688069 9688136 9 182 12.5 10.0 11.2 0.7 249 chr2L 9687887 intron Pka-C1 - chr2L 9688012 intron Pka-C1 - chr2L 9688136 intron Pka-C1 - chr2L_9_9685001 chr2L_9685001 RAL-849 580 chr2L 9719735 9719769 chr2L 9719868 9719902 11 133 1.0 4.0 2.5 3.1 167 chr2L 9719735 intron Nckx30C - chr2L 9719818 intron Nckx30C - chr2L 9719902 intron Nckx30C - chr2L_11_9715001 chr2L_9715001 RAL-849 581 chr2L 9730925 9730966 chr2L 9731058 9731099 6 133 14.0 10.0 12.0 0.5 174 chr2L 9730925 intron,3` UTR Nckx30C -,CG13116 + chr2L 9731012 intron Nckx30C - chr2L 9731099 intron Nckx30C - chr2L_6_9730001 chr2L_9730001 RAL-849 582 chr2L 9730969 9731001 chr2L 9731057 9731134 7 126 8.0 10.0 9.0 0.7 165 chr2L 9730969 intron Nckx30C - chr2L 9731052 intron Nckx30C - chr2L 9731134 intron Nckx30C - chr2L_7_9730001 chr2L_9730001 RAL-849 583 chr2L 9756718 9756787 chr2L 9756877 9756946 19 159 15.5 11.0 13.2 1.3 228 chr2L 9756718 intergenic not near genes chr2L 9756832 intergenic not near genes chr2L 9756946 intergenic not near genes chr2L_19_9755001 chr2L_9755001 RAL-849 584 chr2L 9770720 9770787 chr2L 9770873 9770940 1360 23 150 25.0 21.5 23.2 1.0 220 chr2L 9770720 intron ppk18 - chr2L 9770830 intron ppk18 - chr2L 9770940 exon ppk18 - chr2L_23_9770001 chr2L_9770001 RAL-849 585 chr2L 9773083 9773147 chr2L 9773250 9773314 16 160 16.5 23.0 19.8 0.8 231 chr2L 9773083 intergenic ppk11 -,ppk16 - chr2L 9773198 exon ppk11 - chr2L 9773314 intron ppk11 - chr2L_16_9770001 chr2L_9770001 RAL-849 586 chr2L 9775945 9776001 chr2L 9776077 9776133 15 132 20.5 17.5 19.0 0.8 188 chr2L 9775945 intergenic not near genes chr2L 9776039 intergenic not near genes chr2L 9776133 intergenic not near genes chr2L_15_9775001 chr2L_9775001 RAL-849 587 chr2L 9810273 9810351 chr2L 9810548 9810616 9 269 21.5 20.5 21.0 0.4 343 chr2L 9810273 intron nAChRalpha6 - chr2L 9810444 intron nAChRalpha6 - chr2L 9810616 intron nAChRalpha6 - chr2L_9_9810001 chr2L_9810001 RAL-849 588 chr2L 9853826 9853881 chr2L 9853959 9854014 13 133 14.0 12.5 13.2 0.9 188 chr2L 9853826 intron nAChRalpha6 - chr2L 9853920 intron nAChRalpha6 - chr2L 9854014 intron nAChRalpha6 - chr2L_13_9850001 chr2L_9850001 RAL-849 589 chr2L 9871479 9871534 chr2L 9871613 9871668 20 136 4.5 2.5 3.5 4.4 189 chr2L 9871479 intron nAChRalpha6 - chr2L 9871574 intron nAChRalpha6 - chr2L 9871668 intron nAChRalpha6 - chr2L_20_9870001 chr2L_9870001 RAL-849 590 chr2L 9892467 9892530 chr2L 9892593 9892656 8 126 19.5 21.5 20.5 0.4 189 chr2L 9892467 intron mtDNA-helicase - chr2L 9892562 intron mtDNA-helicase - chr2L 9892656 exon mtDNA-helicase - chr2L_8_9890001 chr2L_9890001 RAL-849 591 chr2L 9905482 9905514 chr2L 9905641 9905673 5 159 23.5 21.5 22.5 0.2 191 chr2L 9905482 intron CG13124 - chr2L 9905578 intron CG13124 - chr2L 9905673 intron CG13124 - chr2L_5_9905001 chr2L_9905001 RAL-849 592 chr2L 9954182 9954218 chr2L 9954318 9954361 5 139 14.5 10.0 12.2 0.4 179 chr2L 9954182 intergenic CG13126 -,CG4709 + chr2L 9954272 intergenic CG4709 +,CG13126 - chr2L 9954361 5` UTR CG4709 + chr2L_5_9950001 chr2L_9950001 RAL-849 593 chr2L 9973676 9973698 chr2L 9980846 9980867 HMS-Beagle 7 7168 12.5 11.0 11.8 0.5 7191 chr2L 9973676 intergenic not near genes chr2L 9977272 intergenic not near genes chr2L 9980867 intergenic not near genes chr2L_7_9975001 chr2L_9975001 RAL-849 594 chr2L 9973703 9973755 chr2L 9980845 9980924 HMS-Beagle 21 7167 6.0 10.5 8.2 2.3 7221 chr2L 9973703 intergenic not near genes chr2L 9977314 intergenic not near genes chr2L 9980924 intergenic not near genes chr2L_21_9975001 chr2L_9975001 RAL-849 595 chr2L 9982294 9982326 chr2L 9982665 9982697 6 371 14.5 5.5 10.0 0.5 403 chr2L 9982294 intergenic not near genes chr2L 9982496 intergenic not near genes chr2L 9982697 intergenic not near genes chr2L_6_9980001 chr2L_9980001 RAL-849 596 chr2L 9986306 9986367 chr2L 9986451 9986512 14 142 15.5 17.0 16.2 0.8 206 chr2L 9986306 intron bib + chr2L 9986409 intron bib + chr2L 9986512 intron bib + chr2L_14_9985001 chr2L_9985001 RAL-849 597 chr2L 10007635 10007702 chr2L 10010235 10010302 15 2604 50.0 42.5 46.2 0.3 2667 chr2L 10007635 exon CG4747 + chr2L 10008968 intergenic CG4747 +,Trp1 + chr2L 10010302 intron Trp1 + chr2L_15_10005001 chr2L_10005001 RAL-849 598 chr2L 10027834 10027907 chr2L 10027967 10028040 13 132 18.0 18.0 18.0 0.7 206 chr2L 10027834 exon CG13127 + chr2L 10027937 exon CG13127 + chr2L 10028040 exon CG13127 + chr2L_13_10025001 chr2L_10025001 RAL-849 599 chr2L 10040571 10040630 chr2L 10040783 10040842 20 209 21.0 23.5 22.2 0.9 271 chr2L 10040571 intergenic not near genes chr2L 10040706 intergenic not near genes chr2L 10040842 intergenic not near genes chr2L_20_10040001 chr2L_10040001 RAL-849 600 chr2L 10048281 10048302 chr2L 10048407 10048428 4 126 4.5 4.5 4.5 0.7 147 chr2L 10048281 intergenic not near genes chr2L 10048354 intergenic not near genes chr2L 10048428 intergenic not near genes chr2L_4_10045001 chr2L_10045001 RAL-849 601 chr2L 10051677 10051698 chr2L 10051812 10051813 5 131 22.5 18.5 20.5 0.2 136 chr2L 10051677 5` UTR CR44874 + chr2L 10051745 5` UTR CR44874 + chr2L 10051813 5` UTR CR44874 + chr2L_5_10050001 chr2L_10050001 RAL-849 602 chr2L 10051700 10051746 chr2L 10051809 10051856 17 127 18.0 18.5 18.2 0.9 156 chr2L 10051700 5` UTR CR44874 + chr2L 10051778 5` UTR CR44874 + chr2L 10051856 5` UTR CR44874 + chr2L_17_10050001 chr2L_10050001 RAL-849 603 chr2L 10087439 10087481 chr2L 10087554 10087588 9 122 22.0 24.5 23.2 0.4 149 chr2L 10087439 intron CG44153 - chr2L 10087514 intron CG44153 - chr2L 10087588 intron CG44153 - chr2L_9_10085001 chr2L_10085001 RAL-849 604 chr2L 10095609 10095659 chr2L 10095739 10095789 4 130 18.5 21.5 20.0 0.2 180 chr2L 10095609 intron CG44153 - chr2L 10095699 intron CG44153 - chr2L 10095789 intron CG44153 - chr2L_4_10095001 chr2L_10095001 RAL-849 605 chr2L 10105271 10105303 chr2L 10105397 10105402 4 114 17.5 12.0 14.8 0.3 131 chr2L 10105271 intron,intron CG44153 -,CG34109 + chr2L 10105336 intron,intron CG44153 -,CG34109 + chr2L 10105402 intron,intron CG44153 -,CG34109 + chr2L_4_10105001 chr2L_10105001 RAL-849 606 chr2L 10130505 10130573 chr2L 10130637 10130705 7 128 25.0 19.0 22.0 0.3 200 chr2L 10130505 intron CG44153 - chr2L 10130605 intron CG44153 - chr2L 10130705 intron CG44153 - chr2L_7_10130001 chr2L_10130001 RAL-849 607 chr2L 10133027 10133072 chr2L 10133140 10133140 17 122 7.5 12.5 10.0 1.5 113 chr2L 10133027 intron CG44153 - chr2L 10133084 intron CG44153 - chr2L 10133140 intron CG44153 - chr2L_17_10130001 chr2L_10130001 RAL-849 608 chr2L 10136188 10136267 chr2L 10136320 10136399 12 131 12.5 7.0 9.8 1.1 211 chr2L 10136188 intron CG44153 - chr2L 10136294 intron CG44153 - chr2L 10136399 intron CG44153 - chr2L_12_10135001 chr2L_10135001 RAL-849 609 chr2L 10138144 10138192 chr2L 10143440 10143488 Rt1c 10 5292 9.0 15.5 12.2 0.8 5344 chr2L 10138144 intron CG44153 - chr2L 10140816 intron CG44153 - chr2L 10143488 intron CG44153 - chr2L_10_10140001 chr2L_10140001 RAL-849 610 chr2L 10153172 10153229 chr2L 10153285 10153358 24 124 12.0 12.0 12.0 1.8 186 chr2L 10153172 intron,exon CG44153 -,CG4839 + chr2L 10153265 intron,intron CG44153 -,CG4839 + chr2L 10153358 intron,exon CG44153 -,CG4839 + chr2L_24_10150001 chr2L_10150001 RAL-849 611 chr2L 10156279 10156344 chr2L 10163799 10163863 blood 25 7517 5.5 7.0 6.2 3.5 7584 chr2L 10156279 intron,3` UTR CG44153 -,CG4839 + chr2L 10160071 intron CG44153 - chr2L 10163863 intron CG44153 - chr2L_25_10160001 chr2L_10160001 RAL-849 612 chr2L 10175904 10175945 chr2L 10176034 10176075 12 129 21.5 22.0 21.8 0.5 171 chr2L 10175904 intron CG44153 - chr2L 10175990 intron CG44153 - chr2L 10176075 intron CG44153 - chr2L_12_10175001 chr2L_10175001 RAL-849 613 chr2L 10175948 10175960 chr2L 10176025 10176075 4 107 22.0 23.0 22.5 0.2 127 chr2L 10175948 intron CG44153 - chr2L 10176012 intron CG44153 - chr2L 10176075 intron CG44153 - chr2L_4_10175001 chr2L_10175001 RAL-849 614 chr2L 10180537 10180601 chr2L 10180673 10180738 16 132 19.5 23.5 21.5 0.7 201 chr2L 10180537 intergenic CG44153 - chr2L 10180638 intergenic CG44153 - chr2L 10180738 intergenic CG44153 - chr2L_16_10180001 chr2L_10180001 RAL-849 615 chr2L 10191412 10191483 chr2L 10191545 10191616 18 133 10.0 7.0 8.5 1.9 204 chr2L 10191412 intron,exon Sur -,CG31874 - chr2L 10191514 intron Sur - chr2L 10191616 exon Sur - chr2L_18_10190001 chr2L_10190001 RAL-849 616 chr2L 10232870 10232933 chr2L 10232998 10233061 13 128 21.5 18.0 19.8 0.6 191 chr2L 10232870 intron eEF1delta + chr2L 10232966 intron eEF1delta + chr2L 10233061 intron eEF1delta + chr2L_13_10230001 chr2L_10230001 RAL-849 617 chr2L 10258395 10258451 chr2L 10258530 10258585 7 135 6.5 12.0 9.2 0.7 190 chr2L 10258395 exon Pten - chr2L 10258490 intron Pten - chr2L 10258585 exon Pten - chr2L_7_10255001 chr2L_10255001 RAL-849 618 chr2L 10294634 10294690 chr2L 10294770 10294826 7 136 15.5 14.0 14.8 0.4 192 chr2L 10294634 intron Hand - chr2L 10294730 intron Hand - chr2L 10294826 intron Hand - chr2L_7_10290001 chr2L_10290001 RAL-849 619 chr2L 10318801 10318852 chr2L 10318928 10318979 10 127 25.0 25.5 25.2 0.4 178 chr2L 10318801 exon CG5381 - chr2L 10318890 exon CG5381 - chr2L 10318979 exon CG5381 - chr2L_10_10315001 chr2L_10315001 RAL-849 620 chr2L 10458056 10458093 chr2L 10458367 10458404 7 311 5.5 5.0 5.2 1.1 348 chr2L 10458056 intron LM408 + chr2L 10458230 intron LM408 + chr2L 10458404 intron LM408 + chr2L_7_10455001 chr2L_10455001 RAL-849 621 chr2L 10458182 10458213 chr2L 10458328 10458352 6 145 0.0 0.0 0.0 6.0 170 chr2L 10458182 intron LM408 + chr2L 10458267 intron LM408 + chr2L 10458352 intron LM408 + chr2L_6_10455001 chr2L_10455001 RAL-849 622 chr2L 10474350 10474414 chr2L 10474481 10474545 10 130 16.0 10.0 13.0 0.7 195 chr2L 10474350 intergenic RluA-1 - chr2L 10474448 intergenic RluA-1 - chr2L 10474545 intergenic RluA-1 - chr2L_10_10470001 chr2L_10470001 RAL-849 623 chr2L 10495269 10495319 chr2L 10495396 10495446 5 127 15.0 11.5 13.2 0.4 177 chr2L 10495269 intron Myo31DF - chr2L 10495358 intron Myo31DF - chr2L 10495446 intron Myo31DF - chr2L_5_10495001 chr2L_10495001 RAL-849 624 chr2L 10503924 10503976 chr2L 10504052 10504104 15 127 5.5 8.0 6.8 1.9 180 chr2L 10503924 intron Myo31DF - chr2L 10504014 intron Myo31DF - chr2L 10504104 intron Myo31DF - chr2L_15_10500001 chr2L_10500001 RAL-849 625 chr2L 10515313 10515388 chr2L 10515456 10515531 16 143 24.5 22.0 23.2 0.7 218 chr2L 10515313 intron,intron CG45083 -,Fatp - chr2L 10515422 intron,intron CG45083 -,Fatp - chr2L 10515531 intron,intron CG45083 -,Fatp - chr2L_16_10515001 chr2L_10515001 RAL-849 626 chr2L 10519911 10519972 chr2L 10520042 10520103 15 127 15.0 20.0 17.5 0.8 192 chr2L 10519911 intergenic not near genes chr2L 10520007 intergenic not near genes chr2L 10520103 intergenic not near genes chr2L_15_10520001 chr2L_10520001 RAL-849 627 chr2L 10531563 10531621 chr2L 10531705 10531763 10 142 13.0 20.0 16.5 0.6 200 chr2L 10531563 3` UTR Lip4 + chr2L 10531663 3` UTR Lip4 + chr2L 10531763 3` UTR Lip4 + chr2L_10_10530001 chr2L_10530001 RAL-849 628 chr2L 10540833 10540877 chr2L 10540961 10541005 8 128 10.0 13.5 11.8 0.6 172 chr2L 10540833 intergenic not near genes chr2L 10540919 intergenic not near genes chr2L 10541005 intergenic not near genes chr2L_8_10540001 chr2L_10540001 RAL-849 629 chr2L 10563865 10563936 chr2L 10564008 10564079 8 142 8.5 4.0 6.2 1.1 214 chr2L 10563865 intron Trim9 + chr2L 10563972 intron Trim9 + chr2L 10564079 intron Trim9 + chr2L_8_10560001 chr2L_10560001 RAL-849 630 chr2L 10574525 10574590 chr2L 10574672 10574737 11 147 18.5 19.5 19.0 0.6 212 chr2L 10574525 intron Trim9 + chr2L 10574631 intron Trim9 + chr2L 10574737 intron Trim9 + chr2L_11_10570001 chr2L_10570001 RAL-849 631 chr2L 10580752 10580819 chr2L 10580883 10580950 14 131 13.0 8.5 10.8 1.2 198 chr2L 10580752 intron Trim9 + chr2L 10580851 intron Trim9 + chr2L 10580950 intron Trim9 + chr2L_14_10580001 chr2L_10580001 RAL-849 632 chr2L 10589067 10589079 chr2L 10589193 10589205 4 126 18.0 17.5 17.8 0.2 138 chr2L 10589067 intron Trim9 + chr2L 10589136 intron Trim9 + chr2L 10589205 intron Trim9 + chr2L_4_10585001 chr2L_10585001 RAL-849 633 chr2L 10592802 10592868 chr2L 10600514 10600580 opus 10 7712 7.5 5.5 6.5 1.3 7778 chr2L 10592802 intron Trim9 + chr2L 10596691 intron Trim9 + chr2L 10600580 intron Trim9 + chr2L_10_10595001 chr2L_10595001 RAL-849 634 chr2L 10604150 10604214 chr2L 10604283 10604347 8 133 17.5 13.0 15.2 0.5 197 chr2L 10604150 intron Trim9 + chr2L 10604248 intron Trim9 + chr2L 10604347 intron Trim9 + chr2L_8_10600001 chr2L_10600001 RAL-849 635 chr2L 10631207 10631277 chr2L 10631348 10631424 7 144 12.0 5.5 8.8 0.7 217 chr2L 10631207 intron CG7329 - chr2L 10631316 intron CG7329 - chr2L 10631424 intron CG7329 - chr2L_7_10630001 chr2L_10630001 RAL-849 636 chr2L 10640596 10640669 chr2L 10640735 10640798 25 137 6.5 5.5 6.0 3.6 202 chr2L 10640596 exon CG31872 + chr2L 10640697 exon CG31872 + chr2L 10640798 exon CG31872 + chr2L_25_10640001 chr2L_10640001 RAL-849 637 chr2L 10656548 10656610 chr2L 10656674 10656736 10 126 18.5 20.0 19.2 0.5 188 chr2L 10656548 intergenic not near genes chr2L 10656642 intergenic not near genes chr2L 10656736 intergenic not near genes chr2L_10_10655001 chr2L_10655001 RAL-849 638 chr2L 10669387 10669450 chr2L 10669525 10669588 14 136 8.5 11.0 9.8 1.3 201 chr2L 10669387 intron CG31871 + chr2L 10669488 intron CG31871 + chr2L 10669588 intron CG31871 + chr2L_14_10665001 chr2L_10665001 RAL-849 639 chr2L 10688495 10688564 chr2L 10688621 10688690 5 126 10.0 11.0 10.5 0.4 195 chr2L 10688495 intergenic CG7294 - chr2L 10688592 intergenic CG7294 - chr2L 10688690 intergenic CG7294 - chr2L_5_10685001 chr2L_10685001 RAL-849 640 chr2L 10698078 10698156 chr2L 10698211 10698289 12 133 21.5 19.0 20.2 0.6 211 chr2L 10698078 5` UTR CR44181 + chr2L 10698184 5` UTR CR44181 + chr2L 10698289 intergenic CR44181 +,CG7300 - chr2L_12_10695001 chr2L_10695001 RAL-849 641 chr2L 10698526 10698596 chr2L 10698659 10698739 6 138 9.5 10.5 10.0 0.5 213 chr2L 10698526 intergenic CR44181 +,CG7300 - chr2L 10698632 intergenic CR44181 + chr2L 10698739 intergenic not near genes chr2L_6_10695001 chr2L_10695001 RAL-849 642 chr2L 10704874 10704948 chr2L 10705019 10705093 8 145 23.0 23.0 23.0 0.3 219 chr2L 10704874 intron,exon Lip2 -,CG6415 + chr2L 10704984 intron Lip2 - chr2L 10705093 exon Lip2 - chr2L_8_10700001 chr2L_10700001 RAL-849 643 chr2L 10705404 10705477 chr2L 10705536 10705610 22 120 21.0 23.5 22.2 0.9 206 chr2L 10705404 exon Lip2 - chr2L 10705507 intron Lip2 - chr2L 10705610 intron Lip2 - chr2L_22_10705001 chr2L_10705001 RAL-849 644 chr2L 10721235 10721312 chr2L 10721364 10721441 14 129 6.0 5.5 5.8 2.1 206 chr2L 10721235 intergenic not near genes chr2L 10721338 intergenic not near genes chr2L 10721441 intergenic not near genes chr2L_14_10720001 chr2L_10720001 RAL-849 645 chr2L 10727247 10727308 chr2L 10727408 10727469 7 161 14.0 4.0 9.0 0.7 222 chr2L 10727247 intron CG6431 + chr2L 10727358 intron CG6431 + chr2L 10727469 intron CG6431 + chr2L_7_10725001 chr2L_10725001 RAL-849 646 chr2L 10752097 10752160 chr2L 10752226 10752289 16 129 23.0 28.0 25.5 0.6 192 chr2L 10752097 intron CG17124 - chr2L 10752193 intron CG17124 - chr2L 10752289 intron CG17124 - chr2L_16_10750001 chr2L_10750001 RAL-849 647 chr2L 10752359 10752404 chr2L 10752549 10752594 9 189 18.0 14.0 16.0 0.5 235 chr2L 10752359 intron CG17124 - chr2L 10752476 intron CG17124 - chr2L 10752594 intron CG17124 - chr2L_9_10750001 chr2L_10750001 RAL-849 648 chr2L 10755532 10755595 chr2L 10755691 10755754 6 159 14.5 13.0 13.8 0.4 222 chr2L 10755532 intron CG17124 - chr2L 10755643 intron CG17124 - chr2L 10755754 intron CG17124 - chr2L_6_10755001 chr2L_10755001 RAL-849 649 chr2L 10787931 10788030 chr2L 10788074 10788156 11 137 22.0 21.5 21.8 0.5 225 chr2L 10787931 intron CG31869 - chr2L 10788044 intron CG31869 - chr2L 10788156 intron CG31869 - chr2L_11_10785001 chr2L_10785001 RAL-849 650 chr2L 10801919 10801931 chr2L 10802045 10802057 4 126 19.0 15.5 17.2 0.2 138 chr2L 10801919 3` UTR CR44581 - chr2L 10801988 3` UTR CR44581 - chr2L 10802057 3` UTR CR44581 - chr2L_4_10800001 chr2L_10800001 RAL-849 651 chr2L 10801933 10801994 chr2L 10802044 10802102 15 124 15.0 16.0 15.5 0.9 169 chr2L 10801933 3` UTR CR44581 - chr2L 10802018 3` UTR CR44581 - chr2L 10802102 3` UTR CR44581 - chr2L_15_10800001 chr2L_10800001 RAL-849 652 chr2L 10811539 10811553 chr2L 10811941 10811995 4 432 16.5 16.0 16.2 0.2 456 chr2L 10811539 intron Nos - chr2L 10811767 intron Nos - chr2L 10811995 intron Nos - chr2L_4_10810001 chr2L_10810001 RAL-849 653 chr2L 10817240 10817279 chr2L 10817371 10817410 8 123 25.5 22.0 23.8 0.3 170 chr2L 10817240 intron Nos - chr2L 10817325 intron Nos - chr2L 10817410 intron Nos - chr2L_8_10815001 chr2L_10815001 RAL-849 654 chr2L 10821228 10821291 chr2L 10821402 10821465 11 168 25.0 15.5 20.2 0.5 237 chr2L 10821228 intron,exon Nos -,CG17134 + chr2L 10821346 intron,exon Nos -,CG17134 + chr2L 10821465 intron,exon Nos -,CG17134 + chr2L_11_10820001 chr2L_10820001 RAL-849 655 chr2L 10821293 10821297 chr2L 10821396 10821468 4 142 23.0 16.5 19.8 0.2 175 chr2L 10821293 intron,exon Nos -,CG17134 + chr2L 10821380 intron,exon Nos -,CG17134 + chr2L 10821468 intron,exon Nos -,CG17134 + chr2L_4_10820001 chr2L_10820001 RAL-849 656 chr2L 10836709 10836779 chr2L 10836838 10836908 19 129 13.0 13.5 13.2 1.3 199 chr2L 10836709 intron Nos - chr2L 10836808 intron Nos - chr2L 10836908 intron Nos - chr2L_19_10835001 chr2L_10835001 RAL-849 657 chr2L 10849601 10849662 chr2L 10849925 10849986 14 319 12.0 17.0 14.5 0.9 385 chr2L 10849601 5` UTR porin - chr2L 10849794 5` UTR porin - chr2L 10849986 5` UTR porin - chr2L_14_10845001 chr2L_10845001 RAL-849 658 chr2L 10850943 10850986 chr2L 10851075 10851118 8 132 7.5 6.0 6.8 1.0 175 chr2L 10850943 intron CG43129 + chr2L 10851030 intron CG43129 + chr2L 10851118 intron CG43129 + chr2L_8_10850001 chr2L_10850001 RAL-849 659 chr2L 10862791 10862873 chr2L 10864456 10864479 Rt1c 14 1650 10.5 8.0 9.2 1.4 1688 chr2L 10862791 intron CR43807 - chr2L 10863635 intron CR43807 - chr2L 10864479 3` UTR CR43807 - chr2L_14_10860001 chr2L_10860001 RAL-849 660 chr2L 10887372 10887427 chr2L 10887515 10887570 7 143 22.0 17.5 19.8 0.3 198 chr2L 10887372 intergenic CR44490 +,CG14071 - chr2L 10887471 intergenic CG14071 -,CR44490 + chr2L 10887570 intergenic CG14071 -,CR44490 + chr2L_7_10885001 chr2L_10885001 RAL-849 661 chr2L 10899107 10899127 chr2L 10899237 10899257 5 130 6.0 23.0 14.5 0.3 150 chr2L 10899107 intergenic not near genes chr2L 10899182 intergenic not near genes chr2L 10899257 intergenic not near genes chr2L_5_10895001 chr2L_10895001 RAL-849 662 chr2L 10931328 10931406 chr2L 10931457 10931533 18 128 17.5 15.5 16.5 1.0 205 chr2L 10931328 intron dpr2 - chr2L 10931430 intron dpr2 - chr2L 10931533 intron dpr2 - chr2L_18_10930001 chr2L_10930001 RAL-849 663 chr2L 10946908 10946962 chr2L 10956173 10956227 roo 19 9263 8.5 11.5 10.0 1.7 9319 chr2L 10946908 intron dpr2 - chr2L 10951568 intron dpr2 - chr2L 10956227 intron dpr2 - chr2L_19_10950001 chr2L_10950001 RAL-849 664 chr2L 11174605 11174613 chr2L 11174734 11174738 4 128 22.5 15.0 18.8 0.2 133 chr2L 11174605 intron Ca-beta - chr2L 11174672 intron Ca-beta - chr2L 11174738 intron Ca-beta - chr2L_4_11170001 chr2L_11170001 RAL-849 665 chr2L 11174616 11174660 chr2L 11174715 11174787 11 109 12.0 8.0 10.0 1.0 171 chr2L 11174616 intron Ca-beta - chr2L 11174702 intron Ca-beta - chr2L 11174787 intron Ca-beta - chr2L_11_11170001 chr2L_11170001 RAL-849 666 chr2L 11183731 11183772 chr2L 11183871 11183900 5 138 7.5 12.0 9.8 0.5 169 chr2L 11183731 intron Ca-beta - chr2L 11183816 intron Ca-beta - chr2L 11183900 intron Ca-beta - chr2L_5_11180001 chr2L_11180001 RAL-849 667 chr2L 11189203 11189226 chr2L 11189350 11189373 6 147 14.5 10.0 12.2 0.5 170 chr2L 11189203 intron Ca-beta - chr2L 11189288 intron Ca-beta - chr2L 11189373 intron Ca-beta - chr2L_6_11185001 chr2L_11185001 RAL-849 668 chr2L 11191431 11191449 chr2L 11191558 11191576 9 127 13.0 16.0 14.5 0.6 145 chr2L 11191431 intron Ca-beta - chr2L 11191504 intron Ca-beta - chr2L 11191576 intron Ca-beta - chr2L_9_11190001 chr2L_11190001 RAL-849 669 chr2L 11193535 11193580 chr2L 11193668 11193724 8 134 2.0 10.5 6.2 1.1 189 chr2L 11193535 intron Ca-beta - chr2L 11193630 intron Ca-beta - chr2L 11193724 intron Ca-beta - chr2L_8_11190001 chr2L_11190001 RAL-849 670 chr2L 11195083 11195107 chr2L 11195215 11195239 5 132 5.5 2.5 4.0 1.0 156 chr2L 11195083 intron Ca-beta - chr2L 11195161 intron Ca-beta - chr2L 11195239 intron Ca-beta - chr2L_5_11195001 chr2L_11195001 RAL-849 671 chr2L 11196443 11196497 chr2L 11196622 11196676 11 179 27.0 28.5 27.8 0.4 233 chr2L 11196443 intron Ca-beta - chr2L 11196560 intron Ca-beta - chr2L 11196676 intron Ca-beta - chr2L_11_11195001 chr2L_11195001 RAL-849 672 chr2L 11198493 11198517 chr2L 11198626 11198650 9 133 0.0 21.0 10.5 0.8 157 chr2L 11198493 intron Ca-beta - chr2L 11198572 intron Ca-beta - chr2L 11198650 intron Ca-beta - chr2L_9_11195001 chr2L_11195001 RAL-849 673 chr2L 11224012 11224084 chr2L 11224173 11224245 30 161 6.5 6.5 6.5 4.0 233 chr2L 11224012 intron ab + chr2L 11224128 intron ab + chr2L 11224245 intron ab + chr2L_30_11220001 chr2L_11220001 RAL-849 674 chr2L 11246718 11246746 chr2L 11246867 11246895 4 149 27.0 17.0 22.0 0.2 177 chr2L 11246718 intron ab + chr2L 11246806 intron ab + chr2L 11246895 intron ab + chr2L_4_11245001 chr2L_11245001 RAL-849 675 chr2L 11253294 11253351 chr2L 11253425 11253482 5 131 20.5 21.5 21.0 0.2 188 chr2L 11253294 intron ab + chr2L 11253388 intron ab + chr2L 11253482 intron ab + chr2L_5_11250001 chr2L_11250001 RAL-849 676 chr2L 11255282 11255344 chr2L 11255420 11255482 14 137 21.0 25.0 23.0 0.6 200 chr2L 11255282 intron ab + chr2L 11255382 intron ab + chr2L 11255482 intron ab + chr2L_14_11255001 chr2L_11255001 RAL-849 677 chr2L 11292334 11292371 chr2L 11292465 11292502 7 131 27.0 22.0 24.5 0.3 168 chr2L 11292334 intergenic not near genes chr2L 11292418 intergenic not near genes chr2L 11292502 intergenic not near genes chr2L_7_11290001 chr2L_11290001 RAL-849 678 chr2L 11308961 11309010 chr2L 11309119 11309153 10 155 10.0 2.0 6.0 1.4 192 chr2L 11308961 intergenic not near genes chr2L 11309057 intergenic not near genes chr2L 11309153 intergenic not near genes chr2L_10_11305001 chr2L_11305001 RAL-849 679 chr2L 11315219 11315269 chr2L 11317673 11317723 G2 17 2453 7.5 5.5 6.5 2.3 2504 chr2L 11315219 intergenic not near genes chr2L 11316471 intergenic not near genes chr2L 11317723 intergenic not near genes chr2L_17_11315001 chr2L_11315001 RAL-849 680 chr2L 11339688 11339738 chr2L 11339815 11339865 9 126 26.0 21.0 23.5 0.4 177 chr2L 11339688 intergenic not near genes chr2L 11339776 intergenic not near genes chr2L 11339865 intergenic not near genes chr2L_9_11335001 chr2L_11335001 RAL-849 681 chr2L 11356357 11356413 chr2L 11356518 11356535 7 155 17.5 14.0 15.8 0.4 178 chr2L 11356357 intergenic not near genes chr2L 11356446 intergenic not near genes chr2L 11356535 intergenic not near genes chr2L_7_11355001 chr2L_11355001 RAL-849 682 chr2L 11379902 11379954 chr2L 11380034 11380086 4 132 18.5 11.5 15.0 0.2 184 chr2L 11379902 intergenic not near genes chr2L 11379994 intergenic not near genes chr2L 11380086 intergenic not near genes chr2L_4_11375001 chr2L_11375001 RAL-849 683 chr2L 11390675 11390749 chr2L 11390828 11390902 7 153 15.5 16.5 16.0 0.4 227 chr2L 11390675 3` UTR CR43681 - chr2L 11390788 3` UTR CR43681 - chr2L 11390902 3` UTR CR43681 - chr2L_7_11390001 chr2L_11390001 RAL-849 684 chr2L 11399485 11399524 chr2L 11399615 11399651 4 128 14.5 6.5 10.5 0.3 166 chr2L 11399485 intergenic not near genes chr2L 11399568 intergenic not near genes chr2L 11399651 intergenic not near genes chr2L_4_11395001 chr2L_11395001 RAL-849 685 chr2L 11418607 11418683 chr2L 11418736 11418811 31 129 6.5 4.0 5.2 5.0 204 chr2L 11418607 intergenic not near genes chr2L 11418709 intergenic not near genes chr2L 11418811 intergenic not near genes chr2L_31_11415001 chr2L_11415001 RAL-849 686 chr2L 11450070 11450121 chr2L 11450206 11450216 13 133 6.0 3.5 4.8 2.2 146 chr2L 11450070 intergenic not near genes chr2L 11450143 intergenic not near genes chr2L 11450216 intergenic not near genes chr2L_13_11450001 chr2L_11450001 RAL-849 687 chr2L 11453554 11453619 chr2L 11453682 11453719 11 124 6.5 6.0 6.2 1.5 165 chr2L 11453554 intergenic not near genes chr2L 11453636 intergenic not near genes chr2L 11453719 intergenic not near genes chr2L_11_11450001 chr2L_11450001 RAL-849 688 chr2L 11478641 11478700 chr2L 11478778 11478837 10 137 15.0 16.5 15.8 0.6 196 chr2L 11478641 intergenic not near genes chr2L 11478739 intergenic not near genes chr2L 11478837 intergenic not near genes chr2L_10_11475001 chr2L_11475001 RAL-849 689 chr2L 11480189 11480225 chr2L 11480390 11480426 9 201 7.5 6.5 7.0 1.1 237 chr2L 11480189 intergenic not near genes chr2L 11480308 intergenic not near genes chr2L 11480426 intergenic not near genes chr2L_9_11480001 chr2L_11480001 RAL-849 690 chr2L 11521211 11521269 chr2L 11521337 11521395 7 126 29.0 24.0 26.5 0.3 184 chr2L 11521211 3` UTR,exon CG14929 +,CG14930 - chr2L 11521303 3` UTR CG14929 + chr2L 11521395 3` UTR CG14929 + chr2L_7_11520001 chr2L_11520001 RAL-849 691 chr2L 11537141 11537189 chr2L 11537272 11537289 12 127 16.5 18.0 17.2 0.7 148 chr2L 11537141 intergenic CG43438 + chr2L 11537215 intergenic CG43438 + chr2L 11537289 intergenic CG43438 + chr2L_12_11535001 chr2L_11535001 RAL-849 692 chr2L 11540539 11540601 chr2L 11547994 11548053 Tabor 14 7453 8.0 5.5 6.8 1.8 7514 chr2L 11540539 intergenic not near genes chr2L 11544296 intergenic not near genes chr2L 11548053 intergenic not near genes chr2L_14_11540001 chr2L_11540001 RAL-849 693 chr2L 11563593 11563647 chr2L 11568847 11568901 copia 23 5251 14.0 5.5 9.8 2.1 5308 chr2L 11563593 intergenic not near genes chr2L 11566247 intergenic not near genes chr2L 11568901 intergenic not near genes chr2L_23_11565001 chr2L_11565001 RAL-849 694 chr2L 11572956 11573017 chr2L 11573118 11573179 10 162 20.0 22.0 21.0 0.5 223 chr2L 11572956 intergenic not near genes chr2L 11573068 intergenic not near genes chr2L 11573179 intergenic not near genes chr2L_10_11570001 chr2L_11570001 RAL-849 695 chr2L 11614035 11614083 chr2L 11615550 11615623 hopper2 21 1522 5.0 4.5 4.8 3.6 1588 chr2L 11614035 intron kek2 + chr2L 11614829 intron kek2 + chr2L 11615623 intron kek2 + chr2L_21_11610001 chr2L_11610001 RAL-849 696 chr2L 11618525 11618572 chr2L 11618666 11618713 11 141 8.5 9.5 9.0 1.1 188 chr2L 11618525 intron kek2 + chr2L 11618619 intron kek2 + chr2L 11618713 intron kek2 + chr2L_11_11615001 chr2L_11615001 RAL-849 697 chr2L 11633117 11633197 chr2L 11633269 11633349 15 151 11.0 8.5 9.8 1.4 232 chr2L 11633117 intergenic not near genes chr2L 11633233 intergenic not near genes chr2L 11633349 intergenic not near genes chr2L_15_11630001 chr2L_11630001 RAL-849 698 chr2L 11635224 11635285 chr2L 11635367 11635430 7 144 26.5 28.5 27.5 0.2 206 chr2L 11635224 intergenic not near genes chr2L 11635327 intergenic not near genes chr2L 11635430 intergenic not near genes chr2L_7_11635001 chr2L_11635001 RAL-849 699 chr2L 11672096 11672160 chr2L 11672253 11672317 11 157 12.5 13.5 13.0 0.8 221 chr2L 11672096 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672317 intergenic not near genes chr2L_11_11670001 chr2L_11670001 RAL-849 700 chr2L 11707003 11707076 chr2L 11707158 11707199 11 151 22.0 14.0 18.0 0.6 196 chr2L 11707003 intergenic not near genes chr2L 11707101 intergenic not near genes chr2L 11707199 intergenic not near genes chr2L_11_11705001 chr2L_11705001 RAL-849 701 chr2L 11713484 11713492 chr2L 11721002 11721010 blood 5 7518 15.0 7.0 11.0 0.4 7526 chr2L 11713484 intergenic not near genes chr2L 11717247 intergenic not near genes chr2L 11721010 intergenic CR44143 + chr2L_5_11715001 chr2L_11715001 RAL-849 702 chr2L 11713493 11713507 chr2L 11720986 11721025 blood 10 7515 12.5 4.5 8.5 1.1 7532 chr2L 11713493 intergenic not near genes chr2L 11717259 intergenic not near genes chr2L 11721025 intergenic CR44143 + chr2L_10_11715001 chr2L_11715001 RAL-849 703 chr2L 11713511 11713530 chr2L 11720974 11721048 blood 8 7511 9.5 3.0 6.2 1.1 7537 chr2L 11713511 intergenic not near genes chr2L 11717280 intergenic not near genes chr2L 11721048 intergenic CR44143 + chr2L_8_11715001 chr2L_11715001 RAL-849 704 chr2L 11726768 11726823 chr2L 11726886 11726962 14 128 15.0 16.0 15.5 0.8 194 chr2L 11726768 intergenic not near genes chr2L 11726865 intergenic not near genes chr2L 11726962 intergenic not near genes chr2L_14_11725001 chr2L_11725001 RAL-849 705 chr2L 11732899 11732967 chr2L 11733026 11733094 8 127 19.5 14.0 16.8 0.4 195 chr2L 11732899 intergenic not near genes chr2L 11732996 intergenic not near genes chr2L 11733094 intergenic not near genes chr2L_8_11730001 chr2L_11730001 RAL-849 706 chr2L 11733740 11733809 chr2L 11733877 11733946 6 136 8.0 13.5 10.8 0.5 206 chr2L 11733740 intergenic not near genes chr2L 11733843 intergenic not near genes chr2L 11733946 intergenic not near genes chr2L_6_11730001 chr2L_11730001 RAL-849 707 chr2L 11752987 11753034 chr2L 11753124 11753171 16 137 14.5 15.0 14.8 1.0 184 chr2L 11752987 3` UTR CG42470 - chr2L 11753079 3` UTR CG42470 - chr2L 11753171 3` UTR CG42470 - chr2L_16_11750001 chr2L_11750001 RAL-849 708 chr2L 11820395 11820453 chr2L 11820530 11820584 10 132 7.5 20.5 14.0 0.7 189 chr2L 11820395 intron Pde1c - chr2L 11820490 intron Pde1c - chr2L 11820584 intron Pde1c - chr2L_10_11820001 chr2L_11820001 RAL-849 709 chr2L 11824421 11824474 chr2L 11824542 11824600 9 125 20.5 21.0 20.8 0.4 179 chr2L 11824421 intron Pde1c - chr2L 11824510 intron Pde1c - chr2L 11824600 intron Pde1c - chr2L_9_11820001 chr2L_11820001 RAL-849 710 chr2L 11841331 11841393 chr2L 11841459 11841521 15 128 4.5 2.5 3.5 3.3 190 chr2L 11841331 intron Pde1c - chr2L 11841426 intron Pde1c - chr2L 11841521 intron Pde1c - chr2L_15_11840001 chr2L_11840001 RAL-849 711 chr2L 11873796 11873858 chr2L 11873932 11873994 9 136 18.0 14.0 16.0 0.5 198 chr2L 11873796 intron Pde1c - chr2L 11873895 intron Pde1c - chr2L 11873994 intron Pde1c - chr2L_9_11870001 chr2L_11870001 RAL-849 712 chr2L 11874857 11874915 chr2L 11874989 11875046 4 131 6.5 12.0 9.2 0.4 189 chr2L 11874857 intron Pde1c - chr2L 11874952 intron Pde1c - chr2L 11875046 intron Pde1c - chr2L_4_11870001 chr2L_11870001 RAL-849 713 chr2L 11886419 11886449 chr2L 11886562 11886598 6 146 20.5 19.0 19.8 0.3 179 chr2L 11886419 intron Pde1c - chr2L 11886508 intron Pde1c - chr2L 11886598 intron Pde1c - chr2L_6_11885001 chr2L_11885001 RAL-849 714 chr2L 11892505 11892787 chr2L 11892644 11892911 32 138 15.0 19.0 17.0 1.8 406 chr2L 11892505 intron Pde1c - chr2L 11892708 intron Pde1c - chr2L 11892911 intron Pde1c - chr2L_32_11890001 chr2L_11890001 RAL-849 715 chr2L 11951292 11951355 chr2L 11951439 11951502 12 147 16.5 15.5 16.0 0.7 210 chr2L 11951292 intergenic not near genes chr2L 11951397 intergenic not near genes chr2L 11951502 intergenic not near genes chr2L_12_11950001 chr2L_11950001 RAL-849 716 chr2L 11953511 11953550 chr2L 11953643 11953682 12 132 10.5 11.5 11.0 1.0 171 chr2L 11953511 3` UTR CR43314 - chr2L 11953596 3` UTR CR43314 - chr2L 11953682 3` UTR CR43314 - chr2L_12_11950001 chr2L_11950001 RAL-849 717 chr2L 12026757 12026770 chr2L 12026988 12027001 7 231 5.5 0.0 2.8 1.8 244 chr2L 12026757 intergenic not near genes chr2L 12026879 intergenic not near genes chr2L 12027001 intergenic dmGlut + chr2L_7_12025001 chr2L_12025001 RAL-849 718 chr2L 12046455 12046523 chr2L 12046629 12046697 10 174 14.0 12.5 13.2 0.7 242 chr2L 12046455 5` UTR CR44589 + chr2L 12046576 5` UTR CR44589 + chr2L 12046697 intergenic Plzf -,CR44589 + chr2L_10_12045001 chr2L_12045001 RAL-849 719 chr2L 12067286 12067343 chr2L 12074388 12074445 297 26 7102 10.0 8.5 9.2 2.5 7159 chr2L 12067286 intergenic not near genes chr2L 12070866 intergenic not near genes chr2L 12074445 intergenic not near genes chr2L_26_12070001 chr2L_12070001 RAL-849 720 chr2L 12093150 12093187 chr2L 12093284 12093321 7 134 10.0 3.0 6.5 0.9 171 chr2L 12093150 intron Pex19 + chr2L 12093236 intron Pex19 + chr2L 12093321 intron Pex19 + chr2L_7_12090001 chr2L_12090001 RAL-849 721 chr2L 12121878 12121911 chr2L 12122010 12122043 5 132 14.5 9.0 11.8 0.4 165 chr2L 12121878 intron CG17211 + chr2L 12121960 intron CG17211 + chr2L 12122043 intron CG17211 + chr2L_5_12120001 chr2L_12120001 RAL-849 722 chr2L 12131419 12131490 chr2L 12131565 12131636 20 146 18.5 19.5 19.0 1.0 217 chr2L 12131419 exon rho-6 - chr2L 12131528 intron rho-6 - chr2L 12131636 intron rho-6 - chr2L_20_12130001 chr2L_12130001 RAL-849 723 chr2L 12132688 12132738 chr2L 12132824 12132874 7 136 14.0 20.0 17.0 0.4 186 chr2L 12132688 intron rho-6 - chr2L 12132781 intron rho-6 - chr2L 12132874 intron rho-6 - chr2L_7_12130001 chr2L_12130001 RAL-849 724 chr2L 12141145 12141178 chr2L 12141291 12141324 5 146 18.5 5.5 12.0 0.4 179 chr2L 12141145 intergenic not near genes chr2L 12141234 intergenic not near genes chr2L 12141324 intergenic not near genes chr2L_5_12140001 chr2L_12140001 RAL-849 725 chr2L 12152847 12152853 chr2L 12152977 12152983 4 130 27.0 12.0 19.5 0.2 136 chr2L 12152847 intron CG31760 + chr2L 12152915 intron CG31760 + chr2L 12152983 intron CG31760 + chr2L_4_12150001 chr2L_12150001 RAL-849 726 chr2L 12153903 12153932 chr2L 12154015 12154059 7 123 5.5 3.0 4.2 1.3 156 chr2L 12153903 exon CG31760 + chr2L 12153981 intron CG31760 + chr2L 12154059 intron CG31760 + chr2L_7_12150001 chr2L_12150001 RAL-849 727 chr2L 12156079 12156127 chr2L 12156218 12156266 4 139 17.5 15.5 16.5 0.2 187 chr2L 12156079 intron CG31760 + chr2L 12156172 intron CG31760 + chr2L 12156266 intron CG31760 + chr2L_4_12155001 chr2L_12155001 RAL-849 728 chr2L 12157564 12157633 chr2L 12157693 12157763 14 125 17.5 15.0 16.2 0.8 199 chr2L 12157564 intron CG31760 + chr2L 12157664 intron CG31760 + chr2L 12157763 intron CG31760 + chr2L_14_12155001 chr2L_12155001 RAL-849 729 chr2L 12179717 12179789 chr2L 12179853 12179925 13 135 14.0 12.0 13.0 0.9 208 chr2L 12179717 intron aret + chr2L 12179821 intron aret + chr2L 12179925 intron aret + chr2L_13_12175001 chr2L_12175001 RAL-849 730 chr2L 12209996 12210040 chr2L 12210134 12210178 12 138 20.0 17.5 18.8 0.6 182 chr2L 12209996 intron,3` UTR aret +,CG31759 + chr2L 12210087 intron aret + chr2L 12210178 intron aret + chr2L_12_12210001 chr2L_12210001 RAL-849 731 chr2L 12224813 12224888 chr2L 12224940 12225014 7 126 3.0 11.5 7.2 0.9 201 chr2L 12224813 intron aret + chr2L 12224914 intron aret + chr2L 12225014 intron aret + chr2L_7_12220001 chr2L_12220001 RAL-849 732 chr2L 12229552 12229564 chr2L 12229679 12229690 5 127 10.0 6.5 8.2 0.5 138 chr2L 12229552 intron aret + chr2L 12229621 intron aret + chr2L 12229690 intron aret + chr2L_5_12225001 chr2L_12225001 RAL-849 733 chr2L 12229566 12229587 chr2L 12229661 12229714 6 122 9.5 5.0 7.2 0.7 148 chr2L 12229566 intron aret + chr2L 12229640 intron aret + chr2L 12229714 intron aret + chr2L_6_12225001 chr2L_12225001 RAL-849 734 chr2L 12232581 12232634 chr2L 12232724 12232777 7 143 17.5 19.0 18.2 0.4 196 chr2L 12232581 intron aret + chr2L 12232679 intron aret + chr2L 12232777 intron aret + chr2L_7_12230001 chr2L_12230001 RAL-849 735 chr2L 12239007 12239083 chr2L 12239145 12239181 9 131 16.5 16.5 16.5 0.5 174 chr2L 12239007 intron aret + chr2L 12239094 intron aret + chr2L 12239181 intron aret + chr2L_9_12235001 chr2L_12235001 RAL-849 736 chr2L 12239817 12239859 chr2L 12240002 12240044 6 178 21.5 18.5 20.0 0.3 227 chr2L 12239817 intron aret + chr2L 12239930 intron aret + chr2L 12240044 intron aret + chr2L_6_12235001 chr2L_12235001 RAL-849 737 chr2L 12262496 12262533 chr2L 12262632 12262669 hobo 9 136 5.5 4.5 5.0 1.5 173 chr2L 12262496 intron aret + chr2L 12262582 intron aret + chr2L 12262669 intron aret + chr2L_9_12260001 chr2L_12260001 RAL-849 738 chr2L 12264642 12264653 chr2L 12264772 12264794 4 138 4.0 16.5 10.2 0.4 152 chr2L 12264642 intron aret + chr2L 12264718 intron aret + chr2L 12264794 intron aret + chr2L_4_12260001 chr2L_12260001 RAL-849 739 chr2L 12272117 12272181 chr2L 12272245 12272307 4 127 15.0 19.5 17.2 0.2 190 chr2L 12272117 intron aret + chr2L 12272212 intron aret + chr2L 12272307 intron aret + chr2L_4_12270001 chr2L_12270001 RAL-849 740 chr2L 12278895 12278946 chr2L 12279025 12279076 9 130 15.5 12.0 13.8 0.6 181 chr2L 12278895 exon aret + chr2L 12278986 intron aret + chr2L 12279076 intron aret + chr2L_9_12275001 chr2L_12275001 RAL-849 741 chr2L 12294202 12294250 chr2L 12294334 12294382 8 132 16.0 11.0 13.5 0.6 180 chr2L 12294202 intron aret + chr2L 12294292 intron aret + chr2L 12294382 intron aret + chr2L_8_12290001 chr2L_12290001 RAL-849 742 chr2L 12366832 12366876 chr2L 12366968 12367012 12 135 5.0 7.5 6.2 1.7 180 chr2L 12366832 intron bru-2 + chr2L 12366922 intron bru-2 + chr2L 12367012 intron bru-2 + chr2L_12_12365001 chr2L_12365001 RAL-849 743 chr2L 12384882 12384950 chr2L 12385017 12385085 16 135 10.0 4.0 7.0 2.0 203 chr2L 12384882 intron bru-2 + chr2L 12384984 intron bru-2 + chr2L 12385085 intron bru-2 + chr2L_16_12380001 chr2L_12380001 RAL-849 744 chr2L 12396006 12396057 chr2L 12396150 12396201 5 144 13.5 13.0 13.2 0.4 195 chr2L 12396006 exon bru-2 + chr2L 12396104 intron bru-2 + chr2L 12396201 intron bru-2 + chr2L_5_12395001 chr2L_12395001 RAL-849 745 chr2L 12408900 12408960 chr2L 12409040 12409101 16 140 21.0 18.5 19.8 0.8 201 chr2L 12408900 intron vir-1 - chr2L 12409000 intron vir-1 - chr2L 12409101 intron vir-1 - chr2L_16_12405001 chr2L_12405001 RAL-849 746 chr2L 12410978 12411015 chr2L 12411107 12411144 9 129 15.5 0.0 7.8 1.0 166 chr2L 12410978 intron vir-1 - chr2L 12411061 intron vir-1 - chr2L 12411144 intron vir-1 - chr2L_9_12410001 chr2L_12410001 RAL-849 747 chr2L 12418830 12418903 chr2L 12418975 12419048 10 145 15.5 18.0 16.8 0.6 218 chr2L 12418830 intron vir-1 - chr2L 12418939 intron vir-1 - chr2L 12419048 intron vir-1 - chr2L_10_12415001 chr2L_12415001 RAL-849 748 chr2L 12426087 12426152 chr2L 12426220 12426272 12 121 26.5 26.5 26.5 0.4 185 chr2L 12426087 exon CG6405 + chr2L 12426180 exon CG6405 + chr2L 12426272 exon CG6405 + chr2L_12_12425001 chr2L_12425001 RAL-849 749 chr2L 12466209 12466231 chr2L 12466328 12466361 11 131 1.5 0.0 0.8 6.1 152 chr2L 12466209 intron bun - chr2L 12466285 intron bun - chr2L 12466361 intron bun - chr2L_11_12465001 chr2L_12465001 RAL-849 750 chr2L 12470706 12470773 chr2L 12470833 12470900 10 127 20.0 19.0 19.5 0.5 194 chr2L 12470706 intron bun - chr2L 12470803 intron bun - chr2L 12470900 intron bun - chr2L_10_12470001 chr2L_12470001 RAL-849 751 chr2L 12487850 12487898 chr2L 12487981 12488018 30 135 12.0 10.0 11.0 2.5 168 chr2L 12487850 intron bun - chr2L 12487934 intron bun - chr2L 12488018 intron bun - chr2L_30_12485001 chr2L_12485001 RAL-849 752 chr2L 12490230 12490296 chr2L 12490362 12490422 7 127 7.0 15.5 11.2 0.6 192 chr2L 12490230 intron bun - chr2L 12490326 intron bun - chr2L 12490422 intron bun - chr2L_7_12490001 chr2L_12490001 RAL-849 753 chr2L 12497406 12497420 chr2L 12497539 12497553 4 133 5.5 0.0 2.8 1.1 147 chr2L 12497406 intron bun - chr2L 12497480 intron bun - chr2L 12497553 intron bun - chr2L_4_12495001 chr2L_12495001 RAL-849 754 chr2L 12499004 12499012 chr2L 12499131 12499139 5 127 0.0 5.5 2.8 1.3 135 chr2L 12499004 intron bun - chr2L 12499072 intron bun - chr2L 12499139 intron bun - chr2L_5_12495001 chr2L_12495001 RAL-849 755 chr2L 12500575 12500613 chr2L 12500701 12500739 5 126 29.0 32.0 30.5 0.2 164 chr2L 12500575 intron bun - chr2L 12500657 intron bun - chr2L 12500739 intron bun - chr2L_5_12500001 chr2L_12500001 RAL-849 756 chr2L 12510091 12510104 chr2L 12510218 12510231 5 126 30.0 17.0 23.5 0.2 140 chr2L 12510091 intron bun - chr2L 12510161 intron bun - chr2L 12510231 intron bun - chr2L_5_12510001 chr2L_12510001 RAL-849 757 chr2L 12510106 12510137 chr2L 12510216 12510264 7 121 21.0 17.0 19.0 0.3 158 chr2L 12510106 intron bun - chr2L 12510185 intron bun - chr2L 12510264 intron bun - chr2L_7_12510001 chr2L_12510001 RAL-849 758 chr2L 12515805 12515868 chr2L 12515932 12515995 11 127 10.5 12.5 11.5 0.9 190 chr2L 12515805 intron bun - chr2L 12515900 intron bun - chr2L 12515995 intron bun - chr2L_11_12515001 chr2L_12515001 RAL-849 759 chr2L 12529227 12529263 chr2L 12529410 12529446 6 183 11.0 9.5 10.2 0.5 219 chr2L 12529227 intron bun - chr2L 12529336 intron bun - chr2L 12529446 intron bun - chr2L_6_12525001 chr2L_12525001 RAL-849 760 chr2L 12558274 12558286 chr2L 12565453 12565465 HMS-Beagle 4 7179 11.0 7.5 9.2 0.4 7191 chr2L 12558274 intergenic not near genes chr2L 12561870 intergenic not near genes chr2L 12565465 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-849 761 chr2L 12558288 12558342 chr2L 12565447 12565521 HMS-Beagle 12 7177 3.5 7.0 5.2 1.9 7233 chr2L 12558288 intergenic not near genes chr2L 12561904 intergenic not near genes chr2L 12565521 intergenic not near genes chr2L_12_12560001 chr2L_12560001 RAL-849 762 chr2L 12570310 12570361 chr2L 12570441 12570500 8 138 8.0 0.0 4.0 1.6 190 chr2L 12570310 intergenic CR44598 - chr2L 12570405 intergenic CR44598 - chr2L 12570500 intergenic CR44598 - chr2L_8_12570001 chr2L_12570001 RAL-849 763 chr2L 12583455 12583474 chr2L 12583597 12583616 6 142 10.5 2.5 6.5 0.8 161 chr2L 12583455 5` UTR CR44595 + chr2L 12583536 5` UTR CR44595 + chr2L 12583616 intergenic CR44595 + chr2L_6_12580001 chr2L_12580001 RAL-849 764 chr2L 12598985 12598996 chr2L 12599117 12599128 5 132 13.0 31.0 22.0 0.2 143 chr2L 12598985 intron nub + chr2L 12599056 intron nub + chr2L 12599128 intron nub + chr2L_5_12595001 chr2L_12595001 RAL-849 765 chr2L 12601727 12601791 chr2L 12601861 12601925 12 134 15.5 17.5 16.5 0.7 198 chr2L 12601727 intron nub + chr2L 12601826 intron nub + chr2L 12601925 intron nub + chr2L_12_12600001 chr2L_12600001 RAL-849 766 chr2L 12609466 12609473 chr2L 12609632 12609639 4 166 4.5 4.0 4.2 0.8 173 chr2L 12609466 intron nub + chr2L 12609552 intron nub + chr2L 12609639 intron nub + chr2L_4_12605001 chr2L_12605001 RAL-849 767 chr2L 12619869 12619898 chr2L 12619995 12620024 4 126 30.0 24.0 27.0 0.1 155 chr2L 12619869 intron,intron nub +,Ref2 - chr2L 12619946 intron,intron nub +,Ref2 - chr2L 12620024 intron,intron nub +,Ref2 - chr2L_4_12615001 chr2L_12615001 RAL-849 768 chr2L 12652983 12653059 chr2L 12653110 12653186 25 127 19.0 21.0 20.0 1.2 203 chr2L 12652983 intergenic not near genes chr2L 12653084 intergenic not near genes chr2L 12653186 intergenic not near genes chr2L_25_12650001 chr2L_12650001 RAL-849 769 chr2L 12693800 12693872 chr2L 12693927 12693999 13 127 29.5 25.0 27.2 0.5 199 chr2L 12693800 exon CG6153 + chr2L 12693900 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693999 exon CG5780 - chr2L_13_12690001 chr2L_12690001 RAL-849 770 chr2L 12717345 12717362 chr2L 12717483 12717501 7 138 18.5 21.0 19.8 0.3 156 chr2L 12717345 intron Pih1D1 - chr2L 12717423 intron Pih1D1 - chr2L 12717501 intron Pih1D1 - chr2L_7_12715001 chr2L_12715001 RAL-849 771 chr2L 12719941 12720008 chr2L 12720960 12721027 10 1018 28.0 8.0 18.0 0.5 1086 chr2L 12719941 intron,intron Pih1D1 -,MRP + chr2L 12720484 intron,intron Pih1D1 -,MRP + chr2L 12721027 intron,intron Pih1D1 -,MRP + chr2L_10_12720001 chr2L_12720001 RAL-849 772 chr2L 12728885 12728944 chr2L 12729177 12729236 pogo 12 292 11.0 16.0 13.5 0.8 351 chr2L 12728885 intron MRP + chr2L 12729060 intron MRP + chr2L 12729236 exon MRP + chr2L_12_12725001 chr2L_12725001 RAL-849 773 chr2L 12731016 12731075 chr2L 12735833 12735892 F-element 21 4817 12.5 10.0 11.2 1.7 4876 chr2L 12731016 intron MRP + chr2L 12733454 intron MRP + chr2L 12735892 intron MRP + chr2L_21_12730001 chr2L_12730001 RAL-849 774 chr2L 12739130 12739152 chr2L 12743961 12743983 Doc 8 4829 15.5 7.0 11.2 0.7 4853 chr2L 12739130 exon MRP + chr2L 12741556 intron MRP + chr2L 12743983 exon MRP + chr2L_8_12740001 chr2L_12740001 RAL-849 775 chr2L 12739153 12739195 chr2L 12743960 12744026 Doc 12 4826 9.0 5.5 7.2 1.5 4873 chr2L 12739153 exon MRP + chr2L 12741590 intron MRP + chr2L 12744026 exon MRP + chr2L_12_12740001 chr2L_12740001 RAL-849 776 chr2L 12751268 12751322 chr2L 12751401 12751455 15 130 17.0 22.0 19.5 0.7 187 chr2L 12751268 intergenic not near genes chr2L 12751362 intergenic not near genes chr2L 12751455 intergenic not near genes chr2L_15_12750001 chr2L_12750001 RAL-849 777 chr2L 12763786 12763869 chr2L 12764048 12764131 BS 18 262 0.0 0.0 0.0 18.0 345 chr2L 12763786 intergenic not near genes chr2L 12763958 intergenic not near genes chr2L 12764131 intergenic not near genes chr2L_18_12760001 chr2L_12760001 RAL-849 778 chr2L 12775328 12775403 chr2L 12775455 12775530 8 127 14.5 16.0 15.2 0.5 202 chr2L 12775328 intergenic not near genes chr2L 12775429 intergenic not near genes chr2L 12775530 intergenic not near genes chr2L_8_12775001 chr2L_12775001 RAL-849 779 chr2L 12781757 12781811 chr2L 12789250 12789304 Quasimodo 14 7493 12.5 7.0 9.8 1.3 7547 chr2L 12781757 intergenic not near genes chr2L 12785530 intergenic not near genes chr2L 12789304 intergenic not near genes chr2L_14_12785001 chr2L_12785001 RAL-849 780 chr2L 12791569 12791626 chr2L 12795294 12795351 F-element 14 3725 4.0 8.0 6.0 2.0 3782 chr2L 12791569 intergenic not near genes chr2L 12793460 intergenic not near genes chr2L 12795351 intergenic not near genes chr2L_14_12790001 chr2L_12790001 RAL-849 781 chr2L 12812477 12812539 chr2L 12813152 12813213 5 675 19.0 15.5 17.2 0.3 736 chr2L 12812477 intergenic not near genes chr2L 12812845 intergenic not near genes chr2L 12813213 intergenic not near genes chr2L_5_12810001 chr2L_12810001 RAL-849 782 chr2L 12861666 12861719 chr2L 12863173 12863236 hobo 14 1516 4.0 5.5 4.8 2.4 1570 chr2L 12861666 intergenic not near genes chr2L 12862451 intergenic not near genes chr2L 12863236 intergenic not near genes chr2L_14_12860001 chr2L_12860001 RAL-849 783 chr2L 12868213 12868266 chr2L 12868329 12868391 21 130 13.0 16.5 14.8 1.3 178 chr2L 12868213 intergenic not near genes chr2L 12868302 intergenic not near genes chr2L 12868391 intergenic not near genes chr2L_21_12865001 chr2L_12865001 RAL-849 784 chr2L 12893982 12893997 chr2L 12895499 12895499 hobo 6 1514 23.5 18.5 21.0 0.3 1517 chr2L 12893982 intergenic not near genes chr2L 12894740 intergenic not near genes chr2L 12895499 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-849 785 chr2L 12894000 12894017 chr2L 12895498 12895534 hobo 6 1511 18.0 18.0 18.0 0.3 1534 chr2L 12894000 intergenic not near genes chr2L 12894767 intergenic not near genes chr2L 12895534 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-849 786 chr2L 12894024 12894041 chr2L 12895485 12895557 hobo 8 1501 9.5 13.5 11.5 0.6 1533 chr2L 12894024 intergenic not near genes chr2L 12894790 intergenic not near genes chr2L 12895557 intergenic not near genes chr2L_8_12890001 chr2L_12890001 RAL-849 787 chr2L 12896329 12896371 chr2L 12896753 12896795 6 424 18.5 15.5 17.0 0.3 466 chr2L 12896329 intergenic not near genes chr2L 12896562 intergenic not near genes chr2L 12896795 intergenic not near genes chr2L_6_12895001 chr2L_12895001 RAL-849 788 chr2L 12930461 12930494 chr2L 12930587 12930620 6 126 15.5 14.5 15.0 0.4 159 chr2L 12930461 intergenic not near genes chr2L 12930540 intergenic not near genes chr2L 12930620 intergenic not near genes chr2L_6_12930001 chr2L_12930001 RAL-849 789 chr2L 12933804 12933877 chr2L 12941321 12941394 blood 35 7516 10.0 5.5 7.8 4.0 7590 chr2L 12933804 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941394 intergenic not near genes chr2L_35_12935001 chr2L_12935001 RAL-849 790 chr2L 13036201 13036269 chr2L 13036493 13036561 X-element 18 292 5.5 10.5 8.0 2.0 360 chr2L 13036201 intron CG9932 - chr2L 13036381 intron CG9932 - chr2L 13036561 intron CG9932 - chr2L_18_13035001 chr2L_13035001 RAL-849 791 chr2L 13093042 13093093 chr2L 13093170 13093221 14 128 23.0 24.5 23.8 0.6 179 chr2L 13093042 intergenic not near genes chr2L 13093132 intergenic not near genes chr2L 13093221 intergenic not near genes chr2L_14_13090001 chr2L_13090001 RAL-849 792 chr2L 13112228 13112294 chr2L 13112397 13112458 11 169 15.5 16.0 15.8 0.7 230 chr2L 13112228 intergenic not near genes chr2L 13112343 intergenic not near genes chr2L 13112458 intergenic not near genes chr2L_11_13110001 chr2L_13110001 RAL-849 793 chr2L 13143961 13144018 chr2L 13144090 13144147 20 128 18.0 25.0 21.5 0.9 186 chr2L 13143961 intergenic CG16978 - chr2L 13144054 intergenic CG16978 - chr2L 13144147 intergenic not near genes chr2L_20_13140001 chr2L_13140001 RAL-849 794 chr2L 13147701 13147961 chr2L 13147827 13148092 23 127 16.5 8.0 12.2 1.7 391 chr2L 13147701 intergenic not near genes chr2L 13147896 intergenic not near genes chr2L 13148092 intergenic not near genes chr2L_23_13145001 chr2L_13145001 RAL-849 795 chr2L 13152186 13152257 chr2L 13152314 13152389 12 130 9.0 5.5 7.2 1.5 203 chr2L 13152186 intergenic not near genes chr2L 13152288 intergenic not near genes chr2L 13152389 intergenic not near genes chr2L_12_13150001 chr2L_13150001 RAL-849 796 chr2L 13156424 13156472 chr2L 13156583 13156632 6 159 17.0 10.0 13.5 0.4 208 chr2L 13156424 intergenic not near genes chr2L 13156528 intergenic not near genes chr2L 13156632 intergenic not near genes chr2L_6_13155001 chr2L_13155001 RAL-849 797 chr2L 13157150 13157212 chr2L 13158557 13158619 6 1407 24.5 24.5 24.5 0.2 1469 chr2L 13157150 intergenic not near genes chr2L 13157884 intergenic not near genes chr2L 13158619 intergenic Pk34A + chr2L_6_13155001 chr2L_13155001 RAL-849 798 chr2L 13193321 13193354 chr2L 13193453 13193486 4 132 18.0 23.5 20.8 0.2 165 chr2L 13193321 intron Edem2 + chr2L 13193404 intron Edem2 + chr2L 13193486 exon Edem2 + chr2L_4_13190001 chr2L_13190001 RAL-849 799 chr2L 13211124 13211168 chr2L 13211230 13211305 9 125 25.5 20.5 23.0 0.4 181 chr2L 13211124 exon CG15482 - chr2L 13211214 exon CG15482 - chr2L 13211305 exon CG15482 - chr2L_9_13210001 chr2L_13210001 RAL-849 800 chr2L 13241901 13241932 chr2L 13244342 13244351 BS 5 2437 15.0 6.0 10.5 0.4 2450 chr2L 13241901 5` UTR CR45330 + chr2L 13243126 intron CR45330 + chr2L 13244351 5` UTR CR45330 + chr2L_5_13240001 chr2L_13240001 RAL-849 801 chr2L 13253845 13253890 chr2L 13253983 13254028 5 138 17.0 18.0 17.5 0.3 183 chr2L 13253845 intron CG31728 + chr2L 13253936 intron CG31728 + chr2L 13254028 intron CG31728 + chr2L_5_13250001 chr2L_13250001 RAL-849 802 chr2L 13337647 13337722 chr2L 13337955 13338033 15 310 20.0 25.0 22.5 0.6 386 chr2L 13337647 intergenic not near genes chr2L 13337840 intergenic not near genes chr2L 13338033 intergenic not near genes chr2L_15_13335001 chr2L_13335001 RAL-849 803 chr2L 13398704 13398743 chr2L 13398834 13398873 4 130 15.0 17.0 16.0 0.2 169 chr2L 13398704 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398788 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398873 3` UTR CR44600 - chr2L_4_13395001 chr2L_13395001 RAL-849 804 chr2L 13405611 13405670 chr2L 13410448 13410517 Doc 31 4846 11.0 10.0 10.5 2.7 4906 chr2L 13405611 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410517 exon CG7110 + chr2L_31_13405001 chr2L_13405001 RAL-849 805 chr2L 13412302 13412351 chr2L 13412479 13412506 18 176 10.0 19.0 14.5 1.2 204 chr2L 13412302 intergenic CG16848 + chr2L 13412404 intergenic CG16848 + chr2L 13412506 intergenic CG16848 + chr2L_18_13410001 chr2L_13410001 RAL-849 806 chr2L 13421873 13421947 chr2L 13422001 13422075 10 128 13.0 16.0 14.5 0.6 202 chr2L 13421873 intron CG42784 + chr2L 13421974 intron CG42784 + chr2L 13422075 intron CG42784 + chr2L_10_13420001 chr2L_13420001 RAL-849 807 chr2L 13422334 13422493 chr2L 13422461 13422622 16 127 12.5 6.0 9.2 1.6 288 chr2L 13422334 intron CG42784 + chr2L 13422478 intron CG42784 + chr2L 13422622 intron CG42784 + chr2L_16_13420001 chr2L_13420001 RAL-849 808 chr2L 13437302 13437375 chr2L 13437433 13437509 8 133 11.5 7.0 9.2 0.8 207 chr2L 13437302 intron,intron CG42784 +,Tehao + chr2L 13437406 intron,intron CG42784 +,Tehao + chr2L 13437509 intron,intron CG42784 +,Tehao + chr2L_8_13435001 chr2L_13435001 RAL-849 809 chr2L 13449430 13449490 chr2L 13456916 13456976 Quasimodo 17 7486 6.0 12.0 9.0 1.7 7546 chr2L 13449430 intron,intron CG42784 +,Hsp60D - chr2L 13453203 intron CG42784 + chr2L 13456976 intron CG42784 + chr2L_17_13450001 chr2L_13450001 RAL-849 810 chr2L 13460116 13460192 chr2L 13460259 13460334 14 143 17.5 16.5 17.0 0.8 218 chr2L 13460116 intron,exon CG42784 +,CG42810 + chr2L 13460225 intron CG42784 + chr2L 13460334 intron CG42784 + chr2L_14_13460001 chr2L_13460001 RAL-849 811 chr2L 13481415 13481467 chr2L 13482072 13482124 jockey 27 656 11.0 14.0 12.5 2.0 709 chr2L 13481415 intron CG42784 + chr2L 13481770 intron CG42784 + chr2L 13482124 intron CG42784 + chr2L_27_13480001 chr2L_13480001 RAL-849 812 chr2L 13483758 13483821 chr2L 13483886 13483948 16 128 15.0 16.0 15.5 1.0 190 chr2L 13483758 intron CG42784 + chr2L 13483853 intron CG42784 + chr2L 13483948 intron CG42784 + chr2L_16_13480001 chr2L_13480001 RAL-849 813 chr2L 13492382 13492453 chr2L 13492551 13492621 14 163 14.0 18.5 16.2 0.8 239 chr2L 13492382 intron CG42784 + chr2L 13492502 intron CG42784 + chr2L 13492621 intron CG42784 + chr2L_14_13490001 chr2L_13490001 RAL-849 814 chr2L 13556582 13556601 chr2L 13556713 13556731 4 130 2.0 0.0 1.0 2.0 149 chr2L 13556582 intron kuz + chr2L 13556656 intron kuz + chr2L 13556731 intron kuz + chr2L_4_13555001 chr2L_13555001 RAL-849 815 chr2L 13560368 13560418 chr2L 13565239 13565289 F-element 10 4871 5.0 6.5 5.8 1.5 4921 chr2L 13560368 intron kuz + chr2L 13562828 intron kuz + chr2L 13565289 intron kuz + chr2L_10_13560001 chr2L_13560001 RAL-849 816 chr2L 13567426 13567477 chr2L 13567554 13567599 9 127 4.5 11.5 8.0 1.0 173 chr2L 13567426 intron kuz + chr2L 13567512 intron kuz + chr2L 13567599 intron kuz + chr2L_9_13565001 chr2L_13565001 RAL-849 817 chr2L 13574163 13574186 chr2L 13574277 13574280 6 121 9.0 15.5 12.2 0.5 117 chr2L 13574163 intron kuz + chr2L 13574222 intron kuz + chr2L 13574280 intron kuz + chr2L_6_13570001 chr2L_13570001 RAL-849 818 chr2L 13587137 13587172 chr2L 13587266 13587301 4 129 15.0 21.0 18.0 0.2 164 chr2L 13587137 intron kuz + chr2L 13587219 intron kuz + chr2L 13587301 intron kuz + chr2L_4_13585001 chr2L_13585001 RAL-849 819 chr2L 13588897 13588955 chr2L 13589073 13589131 8 176 18.5 16.0 17.2 0.4 234 chr2L 13588897 intron kuz + chr2L 13589014 intron kuz + chr2L 13589131 intron kuz + chr2L_8_13585001 chr2L_13585001 RAL-849 820 chr2L 13684231 13684286 chr2L 13684357 13684412 9 123 6.5 10.5 8.5 0.9 181 chr2L 13684231 exon CG31814 - chr2L 13684322 intron CG31814 - chr2L 13684412 exon CG31814 - chr2L_9_13680001 chr2L_13680001 RAL-849 821 chr2L 13692984 13693037 chr2L 13693110 13693113 11 119 17.0 21.0 19.0 0.6 129 chr2L 13692984 intron CG31814 - chr2L 13693048 intron CG31814 - chr2L 13693113 intron CG31814 - chr2L_11_13690001 chr2L_13690001 RAL-849 822 chr2L 13696642 13696707 chr2L 13696778 13696838 7 134 14.0 14.5 14.2 0.5 196 chr2L 13696642 intron CG31814 - chr2L 13696740 intron CG31814 - chr2L 13696838 intron CG31814 - chr2L_7_13695001 chr2L_13695001 RAL-849 823 chr2L 13697008 13697049 chr2L 13697154 13697214 10 159 15.0 14.5 14.8 0.6 206 chr2L 13697008 intron CG31814 - chr2L 13697111 intron CG31814 - chr2L 13697214 intron CG31814 - chr2L_10_13695001 chr2L_13695001 RAL-849 824 chr2L 13699507 13699580 chr2L 13699634 13699707 11 126 16.5 19.5 18.0 0.6 200 chr2L 13699507 intron CG31814 - chr2L 13699607 intron CG31814 - chr2L 13699707 intron CG31814 - chr2L_11_13695001 chr2L_13695001 RAL-849 825 chr2L 13713209 13713507 chr2L 13713371 13713633 12 156 13.0 10.5 11.8 0.9 424 chr2L 13713209 intron CG31814 - chr2L 13713421 intron CG31814 - chr2L 13713633 intron CG31814 - chr2L_12_13710001 chr2L_13710001 RAL-849 826 chr2L 13713509 13713567 chr2L 13713631 13713693 9 126 9.0 7.5 8.2 1.0 184 chr2L 13713509 intron CG31814 - chr2L 13713601 intron CG31814 - chr2L 13713693 intron CG31814 - chr2L_9_13710001 chr2L_13710001 RAL-849 827 chr2L 13720522 13720580 chr2L 13720648 13720706 10 126 13.5 13.5 13.5 0.7 184 chr2L 13720522 intergenic not near genes chr2L 13720614 intergenic not near genes chr2L 13720706 intergenic not near genes chr2L_10_13720001 chr2L_13720001 RAL-849 828 chr2L 13733549 13733578 chr2L 13733685 13733698 4 128 26.0 17.5 21.8 0.2 149 chr2L 13733549 intergenic not near genes chr2L 13733624 intergenic not near genes chr2L 13733698 intergenic not near genes chr2L_4_13730001 chr2L_13730001 RAL-849 829 chr2L 13733581 13733615 chr2L 13733684 13733743 8 126 19.5 17.5 18.5 0.4 162 chr2L 13733581 intergenic not near genes chr2L 13733662 intergenic not near genes chr2L 13733743 intergenic not near genes chr2L_8_13730001 chr2L_13730001 RAL-849 830 chr2L 13736930 13736995 chr2L 13737076 13737141 12 144 20.0 18.0 19.0 0.6 211 chr2L 13736930 3` UTR CG31813 + chr2L 13737036 intergenic CG31813 + chr2L 13737141 intergenic CG31813 + chr2L_12_13735001 chr2L_13735001 RAL-849 831 chr2L 13745082 13745134 chr2L 13745360 13745412 8 278 14.5 5.0 9.8 0.7 330 chr2L 13745082 intergenic not near genes chr2L 13745247 intergenic not near genes chr2L 13745412 intergenic not near genes chr2L_8_13745001 chr2L_13745001 RAL-849 832 chr2L 13754149 13754219 chr2L 13754279 13754349 6 122 17.5 19.0 18.2 0.3 200 chr2L 13754149 intron,intron CR44846 +,TM9SF4 + chr2L 13754249 intron,intron CR44846 +,TM9SF4 + chr2L 13754349 intron,intron CR44846 +,TM9SF4 + chr2L_6_13750001 chr2L_13750001 RAL-849 833 chr2L 13761770 13761826 chr2L 13762931 13762945 Doc 28 1159 9.5 8.0 8.8 2.9 1175 chr2L 13761770 intron TM9SF4 + chr2L 13762358 intron TM9SF4 + chr2L 13762945 intron TM9SF4 + chr2L_28_13760001 chr2L_13760001 RAL-849 834 chr2L 13800144 13800199 chr2L 13800298 13800353 10 154 16.0 18.5 17.2 0.5 209 chr2L 13800144 intergenic Sec71 + chr2L 13800248 intergenic not near genes chr2L 13800353 intergenic not near genes chr2L_10_13800001 chr2L_13800001 RAL-849 835 chr2L 13802538 13802607 chr2L 13802672 13802742 8 134 24.5 24.0 24.2 0.3 204 chr2L 13802538 intergenic not near genes chr2L 13802640 intergenic not near genes chr2L 13802742 intergenic not near genes chr2L_8_13800001 chr2L_13800001 RAL-849 836 chr2L 13842081 13842161 chr2L 13842215 13842295 11 134 22.0 14.5 18.2 0.6 214 chr2L 13842081 intron CenG1A + chr2L 13842188 intron CenG1A + chr2L 13842295 intron CenG1A + chr2L_11_13840001 chr2L_13840001 RAL-849 837 chr2L 13853045 13853109 chr2L 13862245 13862301 roo 31 9199 7.0 6.0 6.5 4.1 9256 chr2L 13853045 intron CenG1A + chr2L 13857673 intron CenG1A + chr2L 13862301 intron CenG1A + chr2L_31_13855001 chr2L_13855001 RAL-849 838 chr2L 13904547 13904601 chr2L 13904678 13904734 5 129 22.5 13.5 18.0 0.3 187 chr2L 13904547 intergenic Smg5 - chr2L 13904640 intergenic Smg5 - chr2L 13904734 intergenic Smg5 - chr2L_5_13900001 chr2L_13900001 RAL-849 839 chr2L 13914765 13914843 chr2L 13914895 13914973 22 129 16.5 18.5 17.5 1.2 208 chr2L 13914765 5` UTR Ance-3 + chr2L 13914869 5` UTR Ance-3 + chr2L 13914973 5` UTR Ance-3 + chr2L_22_13910001 chr2L_13910001 RAL-849 840 chr2L 13918781 13918834 chr2L 13918918 13918971 9 137 22.5 22.5 22.5 0.4 190 chr2L 13918781 intron Ance-3 + chr2L 13918876 intron Ance-3 + chr2L 13918971 intron Ance-3 + chr2L_9_13915001 chr2L_13915001 RAL-849 841 chr2L 13973646 13973696 chr2L 13973780 13973830 15 134 14.5 15.0 14.8 0.9 184 chr2L 13973646 3` UTR NimC1 - chr2L 13973738 3` UTR NimC1 - chr2L 13973830 3` UTR NimC1 - chr2L_15_13970001 chr2L_13970001 RAL-849 842 chr2L 13988232 13988392 chr2L 13988369 13988522 25 142 9.0 4.0 6.5 3.3 290 chr2L 13988232 intron rk - chr2L 13988377 intron rk - chr2L 13988522 intron rk - chr2L_25_13985001 chr2L_13985001 RAL-849 843 chr2L 14068613 14068629 chr2L 14068703 14068739 6 118 17.5 14.5 16.0 0.4 126 chr2L 14068613 intron nAChRalpha5 + chr2L 14068676 intron nAChRalpha5 + chr2L 14068739 intron nAChRalpha5 + chr2L_6_14065001 chr2L_14065001 RAL-849 844 chr2L 14109472 14109538 chr2L 14109613 14109679 15 141 11.5 8.0 9.8 1.4 207 chr2L 14109472 intergenic CG15293 -,CG31769 - chr2L 14109576 intergenic CG31769 -,CG15293 - chr2L 14109679 3` UTR CG31769 - chr2L_15_14105001 chr2L_14105001 RAL-849 845 chr2L 14144789 14144851 chr2L 14144915 14144918 13 112 17.5 17.5 17.5 0.7 129 chr2L 14144789 intron CG17341 + chr2L 14144854 intron CG17341 + chr2L 14144918 intron CG17341 + chr2L_13_14140001 chr2L_14140001 RAL-849 846 chr2L 14229590 14229640 chr2L 14229725 14229783 6 140 22.5 26.0 24.2 0.2 193 chr2L 14229590 intron Dyrk2 - chr2L 14229686 intron Dyrk2 - chr2L 14229783 intron Dyrk2 - chr2L_6_14225001 chr2L_14225001 RAL-849 847 chr2L 14274865 14274907 chr2L 14274999 14275041 8 134 17.0 23.5 20.2 0.4 176 chr2L 14274865 intron,5` UTR wb +,CG32971 + chr2L 14274953 intron,intron wb +,CG32971 + chr2L 14275041 intron,intron wb +,CG32971 + chr2L_8_14270001 chr2L_14270001 RAL-849 848 chr2L 14333862 14333908 chr2L 14334011 14334058 5 145 11.0 8.5 9.8 0.5 196 chr2L 14333862 intergenic ms(2)34Fe +,CG33090 + chr2L 14333960 intergenic ms(2)34Fe +,CG33090 + chr2L 14334058 intergenic CG33090 +,ms(2)34Fe + chr2L_5_14330001 chr2L_14330001 RAL-849 849 chr2L 14337027 14337083 chr2L 14337159 14337221 10 131 31.5 29.0 30.2 0.3 194 chr2L 14337027 intron CG33090 + chr2L 14337124 intron CG33090 + chr2L 14337221 intron CG33090 + chr2L_10_14335001 chr2L_14335001 RAL-849 850 chr2L 14350907 14350964 chr2L 14351036 14351092 17 128 21.5 20.0 20.8 0.8 185 chr2L 14350907 intron l(2)34Fc - chr2L 14351000 intron l(2)34Fc - chr2L 14351092 intron l(2)34Fc - chr2L_17_14350001 chr2L_14350001 RAL-849 851 chr2L 14378611 14378680 chr2L 14378740 14378806 6 128 21.5 17.0 19.2 0.3 195 chr2L 14378611 3` UTR ppk - chr2L 14378708 3` UTR ppk - chr2L 14378806 3` UTR ppk - chr2L_6_14375001 chr2L_14375001 RAL-849 852 chr2L 14410004 14410054 chr2L 14410149 14410199 8 145 8.0 9.0 8.5 0.8 195 chr2L 14410004 5` UTR CR44733 + chr2L 14410102 intergenic CR44733 + chr2L 14410199 intergenic CR44733 + chr2L_8_14410001 chr2L_14410001 RAL-849 853 chr2L 14427459 14427509 chr2L 14427607 14427660 5 150 12.5 21.5 17.0 0.3 201 chr2L 14427459 intergenic not near genes chr2L 14427560 intergenic not near genes chr2L 14427660 intergenic not near genes chr2L_5_14425001 chr2L_14425001 RAL-849 854 chr2L 14436556 14436624 chr2L 14436723 14436791 14 167 20.5 21.0 20.8 0.6 235 chr2L 14436556 intergenic not near genes chr2L 14436674 intergenic not near genes chr2L 14436791 intergenic not near genes chr2L_14_14435001 chr2L_14435001 RAL-849 855 chr2L 14465565 14465614 chr2L 14469092 14469141 hopper2 5 3527 4.0 6.5 5.2 0.8 3576 chr2L 14465565 intergenic not near genes chr2L 14467353 intergenic not near genes chr2L 14469141 intergenic not near genes chr2L_5_14465001 chr2L_14465001 RAL-849 856 chr2L 14503387 14503427 chr2L 14503516 14503556 7 129 12.5 13.0 12.8 0.5 169 chr2L 14503387 intergenic not near genes chr2L 14503472 intergenic not near genes chr2L 14503556 intergenic not near genes chr2L_7_14500001 chr2L_14500001 RAL-849 857 chr2L 14512632 14512644 chr2L 14512807 14512819 4 175 25.0 17.0 21.0 0.2 187 chr2L 14512632 intergenic not near genes chr2L 14512726 intergenic not near genes chr2L 14512819 intergenic not near genes chr2L_4_14510001 chr2L_14510001 RAL-849 858 chr2L 14512651 14512688 chr2L 14512790 14512863 6 167 17.0 17.5 17.2 0.3 212 chr2L 14512651 intergenic not near genes chr2L 14512757 intergenic not near genes chr2L 14512863 intergenic not near genes chr2L_6_14510001 chr2L_14510001 RAL-849 859 chr2L 14522312 14522321 chr2L 14522441 14522450 6 129 1.5 13.5 7.5 0.7 138 chr2L 14522312 intergenic not near genes chr2L 14522381 intergenic not near genes chr2L 14522450 intergenic not near genes chr2L_6_14520001 chr2L_14520001 RAL-849 860 chr2L 14524576 14524639 chr2L 14525124 14525187 11 548 18.5 22.0 20.2 0.5 611 chr2L 14524576 intron CG33648 + chr2L 14524882 intron CG33648 + chr2L 14525187 intron CG33648 + chr2L_11_14520001 chr2L_14520001 RAL-849 861 chr2L 14537632 14537650 chr2L 14537768 14537786 5 136 4.5 12.5 8.5 0.5 154 chr2L 14537632 intergenic not near genes chr2L 14537709 intergenic not near genes chr2L 14537786 intergenic not near genes chr2L_5_14535001 chr2L_14535001 RAL-849 862 chr2L 14565848 14565892 chr2L 14565955 14566019 4 125 13.0 11.5 12.2 0.3 171 chr2L 14565848 intergenic not near genes chr2L 14565934 intergenic not near genes chr2L 14566019 intergenic not near genes chr2L_4_14565001 chr2L_14565001 RAL-849 863 chr2L 14588340 14588406 chr2L 14588544 14588610 17 204 0.5 10.5 5.5 2.6 270 chr2L 14588340 intergenic CG42680 - chr2L 14588475 intergenic CG42680 - chr2L 14588610 intergenic CG42680 - chr2L_17_14585001 chr2L_14585001 RAL-849 864 chr2L 14588663 14588672 chr2L 14589004 14589013 5 341 5.5 7.0 6.2 0.7 350 chr2L 14588663 intergenic not near genes chr2L 14588838 intergenic not near genes chr2L 14589013 intergenic not near genes chr2L_5_14585001 chr2L_14585001 RAL-849 865 chr2L 14601927 14602003 chr2L 14602060 14602118 25 132 7.0 5.0 6.0 3.6 191 chr2L 14601927 exon osp - chr2L 14602022 intron osp - chr2L 14602118 exon osp - chr2L_25_14600001 chr2L_14600001 RAL-849 866 chr2L 14617852 14617910 chr2L 14617982 14618040 8 130 20.5 18.5 19.5 0.4 188 chr2L 14617852 intron,intron,intron osp -,Adh +,Adhr + chr2L 14617946 intron,intron,intron osp -,Adh +,Adhr + chr2L 14618040 intron,intron,intron osp -,Adh +,Adhr + chr2L_8_14615001 chr2L_14615001 RAL-849 867 chr2L 14618869 14618889 chr2L 14619300 14619320 jockey 11 431 7.0 3.5 5.2 1.8 451 chr2L 14618869 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619094 intron osp - chr2L 14619320 intron osp - chr2L_11_14615001 chr2L_14615001 RAL-849 868 chr2L 14642523 14642590 chr2L 14651736 14651803 roo 19 9212 9.0 6.5 7.8 2.2 9280 chr2L 14642523 intron osp - chr2L 14647163 intron osp - chr2L 14651803 intron osp - chr2L_19_14645001 chr2L_14645001 RAL-849 869 chr2L 14707164 14707218 chr2L 14707333 14707387 8 169 18.0 11.5 14.8 0.5 223 chr2L 14707164 intergenic not near genes chr2L 14707276 intergenic not near genes chr2L 14707387 intergenic not near genes chr2L_8_14705001 chr2L_14705001 RAL-849 870 chr2L 14715498 14715561 chr2L 14715639 14715702 11 141 16.5 14.0 15.2 0.7 204 chr2L 14715498 intergenic not near genes chr2L 14715600 intergenic not near genes chr2L 14715702 intergenic not near genes chr2L_11_14715001 chr2L_14715001 RAL-849 871 chr2L 14747488 14747554 chr2L 14747619 14747691 11 134 18.5 19.0 18.8 0.6 203 chr2L 14747488 intergenic not near genes chr2L 14747590 intergenic not near genes chr2L 14747691 intergenic not near genes chr2L_11_14745001 chr2L_14745001 RAL-849 872 chr2L 14769847 14769909 chr2L 14769978 14770041 16 132 15.0 15.0 15.0 1.0 194 chr2L 14769847 intergenic not near genes chr2L 14769944 intergenic not near genes chr2L 14770041 intergenic not near genes chr2L_16_14765001 chr2L_14765001 RAL-849 873 chr2L 14774183 14774261 chr2L 14774450 14774526 20 265 24.0 16.5 20.2 0.9 343 chr2L 14774183 3` UTR CG4650 - chr2L 14774354 3` UTR CG4650 - chr2L 14774526 3` UTR CG4650 - chr2L_20_14770001 chr2L_14770001 RAL-849 874 chr2L 14778767 14778823 chr2L 14779105 14779157 10 336 11.5 15.5 13.5 0.7 390 chr2L 14778767 intergenic not near genes chr2L 14778962 intergenic not near genes chr2L 14779157 intergenic not near genes chr2L_10_14775001 chr2L_14775001 RAL-849 875 chr2L 14803836 14803907 chr2L 14809089 14809160 copia 31 5253 7.0 4.5 5.8 4.6 5324 chr2L 14803836 intergenic not near genes chr2L 14806498 intergenic not near genes chr2L 14809160 intergenic not near genes chr2L_31_14805001 chr2L_14805001 RAL-849 876 chr2L 14833749 14833820 chr2L 14833903 14833974 17 154 11.5 15.5 13.5 1.2 225 chr2L 14833749 intergenic not near genes chr2L 14833862 intergenic not near genes chr2L 14833974 intergenic not near genes chr2L_17_14830001 chr2L_14830001 RAL-849 877 chr2L 14839705 14839772 chr2L 14839831 14839898 9 125 15.5 15.5 15.5 0.5 193 chr2L 14839705 intergenic not near genes chr2L 14839802 intergenic not near genes chr2L 14839898 intergenic not near genes chr2L_9_14835001 chr2L_14835001 RAL-849 878 chr2L 14840928 14841001 chr2L 14841066 14841138 13 136 5.0 6.5 5.8 1.9 210 chr2L 14840928 3` UTR CR43805 - chr2L 14841033 3` UTR CR43805 - chr2L 14841138 3` UTR CR43805 - chr2L_13_14840001 chr2L_14840001 RAL-849 879 chr2L 14860862 14860934 chr2L 14861027 14861090 12 162 26.5 25.5 26.0 0.4 228 chr2L 14860862 intergenic not near genes chr2L 14860976 intergenic not near genes chr2L 14861090 intergenic not near genes chr2L_12_14860001 chr2L_14860001 RAL-849 880 chr2L 14866911 14866975 chr2L 14867052 14867116 12 141 9.0 12.0 10.5 1.0 205 chr2L 14866911 intergenic not near genes chr2L 14867014 intergenic not near genes chr2L 14867116 intergenic not near genes chr2L_12_14865001 chr2L_14865001 RAL-849 881 chr2L 14887643 14887683 chr2L 14887771 14887811 6 128 4.5 7.5 6.0 0.9 168 chr2L 14887643 intergenic not near genes chr2L 14887727 intergenic not near genes chr2L 14887811 intergenic not near genes chr2L_6_14885001 chr2L_14885001 RAL-849 882 chr2L 14889908 14889977 chr2L 14890383 14890452 jockey 27 475 6.5 8.5 7.5 3.2 544 chr2L 14889908 intergenic not near genes chr2L 14890180 intergenic not near genes chr2L 14890452 intergenic not near genes chr2L_27_14890001 chr2L_14890001 RAL-849 883 chr2L 14933332 14933382 chr2L 14933460 14933510 9 128 16.0 13.0 14.5 0.6 178 chr2L 14933332 intron CG42313 - chr2L 14933421 intron CG42313 - chr2L 14933510 intron CG42313 - chr2L_9_14930001 chr2L_14930001 RAL-849 884 chr2L 14982244 14982269 chr2L 14982391 14982416 5 146 6.0 16.0 11.0 0.4 172 chr2L 14982244 intron mol - chr2L 14982330 intron mol - chr2L 14982416 intron mol - chr2L_5_14980001 chr2L_14980001 RAL-849 885 chr2L 14984330 14984396 chr2L 14991980 14992046 opus 19 7648 6.5 4.0 5.2 3.1 7716 chr2L 14984330 intron mol - chr2L 14988188 intron mol - chr2L 14992046 intron mol - chr2L_19_14985001 chr2L_14985001 RAL-849 886 chr2L 15003498 15003572 chr2L 15003632 15003706 17 134 17.0 21.0 19.0 0.8 208 chr2L 15003498 intergenic not near genes chr2L 15003602 intergenic not near genes chr2L 15003706 intergenic not near genes chr2L_17_15000001 chr2L_15000001 RAL-849 887 chr2L 15013112 15013144 chr2L 15013266 15013298 7 154 13.5 11.0 12.2 0.5 186 chr2L 15013112 intergenic CR43856 - chr2L 15013205 intergenic not near genes chr2L 15013298 intergenic not near genes chr2L_7_15010001 chr2L_15010001 RAL-849 888 chr2L 15025979 15026002 chr2L 15026109 15026133 8 131 23.5 22.0 22.8 0.3 154 chr2L 15025979 exon GABA-B-R1 + chr2L 15026056 exon GABA-B-R1 + chr2L 15026133 intron GABA-B-R1 + chr2L_8_15025001 chr2L_15025001 RAL-849 889 chr2L 15026016 15026050 chr2L 15026101 15026181 6 121 22.0 22.5 22.2 0.3 165 chr2L 15026016 exon GABA-B-R1 + chr2L 15026098 intron GABA-B-R1 + chr2L 15026181 exon GABA-B-R1 + chr2L_6_15025001 chr2L_15025001 RAL-849 890 chr2L 15044663 15044733 chr2L 15044789 15044865 6 127 4.0 0.5 2.2 1.9 202 chr2L 15044663 intergenic ck - chr2L 15044764 intergenic ck - chr2L 15044865 intergenic ck - chr2L_6_15040001 chr2L_15040001 RAL-849 891 chr2L 15053126 15053134 chr2L 15053253 15053261 5 127 12.0 32.0 22.0 0.2 135 chr2L 15053126 intron ck - chr2L 15053194 intron ck - chr2L 15053261 intron ck - chr2L_5_15050001 chr2L_15050001 RAL-849 892 chr2L 15066535 15066606 chr2L 15066678 15066749 18 143 21.5 20.5 21.0 0.8 214 chr2L 15066535 intron,intron vas +,vig - chr2L 15066642 intron,intron vas +,vig - chr2L 15066749 intron,intron vas +,vig - chr2L_18_15065001 chr2L_15065001 RAL-849 893 chr2L 15078020 15078089 chr2L 15078159 15078227 11 135 15.5 12.5 14.0 0.7 207 chr2L 15078020 intron CG15270 + chr2L 15078124 intron CG15270 + chr2L 15078227 intron CG15270 + chr2L_11_15075001 chr2L_15075001 RAL-849 894 chr2L 15078577 15078645 chr2L 15078754 15078822 10 177 11.0 13.5 12.2 0.8 245 chr2L 15078577 intron CG15270 + chr2L 15078700 intron CG15270 + chr2L 15078822 intron CG15270 + chr2L_10_15075001 chr2L_15075001 RAL-849 895 chr2L 15080861 15080936 chr2L 15081004 15081083 15 146 16.5 13.5 15.0 0.9 222 chr2L 15080861 intron CG15270 + chr2L 15080972 intron CG15270 + chr2L 15081083 intron CG15270 + chr2L_15_15080001 chr2L_15080001 RAL-849 896 chr2L 15098492 15098509 chr2L 15098622 15098638 4 128 7.5 5.0 6.2 0.6 146 chr2L 15098492 intergenic not near genes chr2L 15098565 intergenic not near genes chr2L 15098638 intergenic not near genes chr2L_4_15095001 chr2L_15095001 RAL-849 897 chr2L 15098510 15098540 chr2L 15098621 15098670 13 126 8.0 5.0 6.5 1.7 160 chr2L 15098510 intergenic not near genes chr2L 15098590 intergenic not near genes chr2L 15098670 intergenic not near genes chr2L_13_15095001 chr2L_15095001 RAL-849 898 chr2L 15122560 15122601 chr2L 15122706 15122735 4 143 8.5 16.0 12.2 0.3 175 chr2L 15122560 intergenic not near genes chr2L 15122648 intergenic not near genes chr2L 15122735 intergenic not near genes chr2L_4_15120001 chr2L_15120001 RAL-849 899 chr2L 15138725 15138770 chr2L 15138858 15138903 12 131 17.5 16.5 17.0 0.7 178 chr2L 15138725 intergenic not near genes chr2L 15138814 intergenic not near genes chr2L 15138903 intergenic not near genes chr2L_12_15135001 chr2L_15135001 RAL-849 900 chr2L 15163904 15163931 chr2L 15164031 15164058 8 127 3.5 2.5 3.0 2.0 154 chr2L 15163904 intron CG4168 - chr2L 15163981 intron CG4168 - chr2L 15164058 intron CG4168 - chr2L_8_15160001 chr2L_15160001 RAL-849 901 chr2L 15176048 15176079 chr2L 15176242 15176295 5 212 9.0 16.0 12.5 0.4 247 chr2L 15176048 intron CG4168 - chr2L 15176172 intron CG4168 - chr2L 15176295 intron CG4168 - chr2L_5_15175001 chr2L_15175001 RAL-849 902 chr2L 15179474 15179509 chr2L 15179590 15179639 7 117 24.0 23.5 23.8 0.3 165 chr2L 15179474 intron CG4168 - chr2L 15179556 intron CG4168 - chr2L 15179639 intron CG4168 - chr2L_7_15175001 chr2L_15175001 RAL-849 903 chr2L 15179915 15179988 chr2L 15180300 15180373 16 385 15.0 17.5 16.2 0.9 458 chr2L 15179915 intron CG4168 - chr2L 15180144 intron CG4168 - chr2L 15180373 intron CG4168 - chr2L_16_15180001 chr2L_15180001 RAL-849 904 chr2L 15185110 15185184 chr2L 15185244 15185287 18 125 14.0 16.5 15.2 1.1 177 chr2L 15185110 intron CG4168 - chr2L 15185198 intron CG4168 - chr2L 15185287 intron CG4168 - chr2L_18_15185001 chr2L_15185001 RAL-849 905 chr2L 15220194 15220211 chr2L 15220321 15220338 5 127 4.0 5.5 4.8 0.9 144 chr2L 15220194 intergenic not near genes chr2L 15220266 intergenic not near genes chr2L 15220338 intergenic not near genes chr2L_5_15220001 chr2L_15220001 RAL-849 906 chr2L 15226331 15226386 chr2L 15226457 15226512 15 115 2.5 5.0 3.8 3.1 181 chr2L 15226331 intergenic not near genes chr2L 15226422 intergenic not near genes chr2L 15226512 intergenic not near genes chr2L_15_15225001 chr2L_15225001 RAL-849 907 chr2L 15227190 15227260 chr2L 15227316 15227381 20 126 14.0 13.0 13.5 1.4 191 chr2L 15227190 intergenic not near genes chr2L 15227286 intergenic not near genes chr2L 15227381 intergenic not near genes chr2L_20_15225001 chr2L_15225001 RAL-849 908 chr2L 15309317 15309362 chr2L 15309469 15309514 11 152 12.5 6.5 9.5 1.0 197 chr2L 15309317 intergenic not near genes chr2L 15309416 intergenic not near genes chr2L 15309514 intergenic not near genes chr2L_11_15305001 chr2L_15305001 RAL-849 909 chr2L 15339346 15339414 chr2L 15339684 15339740 17 336 6.0 15.5 10.8 1.4 394 chr2L 15339346 intergenic not near genes chr2L 15339543 intergenic not near genes chr2L 15339740 intergenic not near genes chr2L_17_15335001 chr2L_15335001 RAL-849 910 chr2L 15343499 15343562 chr2L 15343621 15343704 6 135 12.5 6.0 9.2 0.6 205 chr2L 15343499 intergenic not near genes chr2L 15343602 intergenic not near genes chr2L 15343704 intergenic not near genes chr2L_6_15340001 chr2L_15340001 RAL-849 911 chr2L 15355669 15355715 chr2L 15355797 15355843 6 128 20.0 20.5 20.2 0.3 174 chr2L 15355669 intergenic not near genes chr2L 15355756 intergenic not near genes chr2L 15355843 intergenic not near genes chr2L_6_15355001 chr2L_15355001 RAL-849 912 chr2L 15375772 15375825 chr2L 15375934 15375987 5 162 3.5 6.0 4.8 0.9 215 chr2L 15375772 intergenic not near genes chr2L 15375880 intergenic not near genes chr2L 15375987 intergenic not near genes chr2L_5_15375001 chr2L_15375001 RAL-849 913 chr2L 15394129 15394143 chr2L 15394269 15394283 4 140 16.5 9.0 12.8 0.3 154 chr2L 15394129 intergenic not near genes chr2L 15394206 intergenic not near genes chr2L 15394283 intergenic not near genes chr2L_4_15390001 chr2L_15390001 RAL-849 914 chr2L 15446009 15446066 chr2L 15453528 15453566 blood 20 7518 10.5 0.0 5.2 3.2 7557 chr2L 15446009 intergenic not near genes chr2L 15449788 intergenic not near genes chr2L 15453566 intergenic not near genes chr2L_20_15445001 chr2L_15445001 RAL-849 915 chr2L 15458228 15458275 chr2L 15458366 15458413 8 138 5.0 8.0 6.5 1.1 185 chr2L 15458228 intergenic not near genes chr2L 15458320 intergenic not near genes chr2L 15458413 intergenic not near genes chr2L_8_15455001 chr2L_15455001 RAL-849 916 chr2L 15476351 15476417 chr2L 15476560 15476626 6 209 11.0 8.5 9.8 0.6 275 chr2L 15476351 intergenic sna - chr2L 15476488 intergenic sna - chr2L 15476626 3` UTR sna - chr2L_6_15475001 chr2L_15475001 RAL-849 917 chr2L 15482530 15482596 chr2L 15482716 15482782 10 186 12.0 8.5 10.2 0.9 252 chr2L 15482530 intergenic not near genes chr2L 15482656 intergenic not near genes chr2L 15482782 intergenic not near genes chr2L_10_15480001 chr2L_15480001 RAL-849 918 chr2L 15490027 15490042 chr2L 15490193 15490208 5 166 5.5 10.0 7.8 0.6 181 chr2L 15490027 intergenic not near genes chr2L 15490118 intergenic not near genes chr2L 15490208 intergenic not near genes chr2L_5_15490001 chr2L_15490001 RAL-849 919 chr2L 15496946 15497004 chr2L 15497085 15497143 13 137 16.5 16.0 16.2 0.8 197 chr2L 15496946 intergenic not near genes chr2L 15497044 intergenic not near genes chr2L 15497143 intergenic not near genes chr2L_13_15495001 chr2L_15495001 RAL-849 920 chr2L 15497338 15497410 chr2L 15497495 15497546 15 152 28.5 27.0 27.8 0.5 208 chr2L 15497338 intergenic not near genes chr2L 15497442 intergenic not near genes chr2L 15497546 intergenic not near genes chr2L_15_15495001 chr2L_15495001 RAL-849 921 chr2L 15499861 15499908 chr2L 15499999 15500046 12 138 11.5 9.5 10.5 1.0 185 chr2L 15499861 intron lace + chr2L 15499954 intron lace + chr2L 15500046 intron lace + chr2L_12_15495001 chr2L_15495001 RAL-849 922 chr2L 15500576 15500604 chr2L 15500704 15500730 10 128 14.0 14.5 14.2 0.7 154 chr2L 15500576 intron lace + chr2L 15500653 intron lace + chr2L 15500730 intron lace + chr2L_10_15500001 chr2L_15500001 RAL-849 923 chr2L 15517982 15518055 chr2L 15518140 15518212 5 158 7.5 20.5 14.0 0.3 230 chr2L 15517982 intergenic not near genes chr2L 15518097 intergenic not near genes chr2L 15518212 intergenic not near genes chr2L_5_15515001 chr2L_15515001 RAL-849 924 chr2L 15545446 15545495 chr2L 15545576 15545626 10 130 12.0 12.0 12.0 0.8 180 chr2L 15545446 intergenic not near genes chr2L 15545536 intergenic not near genes chr2L 15545626 intergenic not near genes chr2L_10_15545001 chr2L_15545001 RAL-849 925 chr2L 15586369 15586429 chr2L 15593471 15593531 297 23 7102 8.0 7.5 7.8 2.6 7162 chr2L 15586369 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593531 intergenic not near genes chr2L_23_15585001 chr2L_15585001 RAL-849 926 chr2L 15610681 15610738 chr2L 15613523 15613580 13 2842 49.5 31.5 40.5 0.3 2899 chr2L 15610681 3` UTR,5` UTR CG15255 -,CR44865 + chr2L 15612130 intergenic CG11864 -,CG15255 - chr2L 15613580 intergenic CG11864 -,CG15254 - chr2L_13_15610001 chr2L_15610001 RAL-849 927 chr2L 15621467 15621520 chr2L 15621607 15621670 8 153 23.0 21.0 22.0 0.3 203 chr2L 15621467 intergenic not near genes chr2L 15621568 intergenic Or35a - chr2L 15621670 intergenic Or35a - chr2L_8_15620001 chr2L_15620001 RAL-849 928 chr2L 15644038 15644064 chr2L 15644173 15644199 4 135 14.5 13.0 13.8 0.3 161 chr2L 15644038 intergenic CG4587 - chr2L 15644118 intergenic CG4587 - chr2L 15644199 3` UTR CG4587 - chr2L_4_15640001 chr2L_15640001 RAL-849 929 chr2L 15732467 15732541 chr2L 15732612 15732655 18 142 20.0 18.0 19.0 0.9 188 chr2L 15732467 intron CycE - chr2L 15732561 intron CycE - chr2L 15732655 intron CycE - chr2L_18_15730001 chr2L_15730001 RAL-849 930 chr2L 15740856 15740923 chr2L 15740984 15741051 7 128 11.0 16.0 13.5 0.5 195 chr2L 15740856 5` UTR CycE - chr2L 15740954 intron CycE - chr2L 15741051 intron CycE - chr2L_7_15740001 chr2L_15740001 RAL-849 931 chr2L 15810336 15810359 chr2L 15810535 15810558 4 199 14.5 14.5 14.5 0.3 222 chr2L 15810336 intergenic CR44602 -,CG42876 - chr2L 15810447 intergenic CG42876 -,CR44602 - chr2L 15810558 intergenic CG42876 -,CR44602 - chr2L_4_15810001 chr2L_15810001 RAL-849 932 chr2L 15826845 15826881 chr2L 15829289 15829325 Tabor 16 2444 7.0 8.5 7.8 1.8 2480 chr2L 15826845 intergenic not near genes chr2L 15828085 intergenic not near genes chr2L 15829325 intergenic not near genes chr2L_16_15825001 chr2L_15825001 RAL-849 933 chr2L 15877231 15877271 chr2L 15877345 15877352 9 104 17.5 15.0 16.2 0.5 121 chr2L 15877231 3` UTR CG7653 - chr2L 15877292 3` UTR CG7653 - chr2L 15877352 3` UTR CG7653 - chr2L_9_15875001 chr2L_15875001 RAL-849 934 chr2L 15877274 15877296 chr2L 15877339 15877393 4 97 16.0 16.5 16.2 0.2 119 chr2L 15877274 3` UTR CG7653 - chr2L 15877334 3` UTR CG7653 - chr2L 15877393 3` UTR CG7653 - chr2L_4_15875001 chr2L_15875001 RAL-849 935 chr2L 15886898 15886973 chr2L 15887036 15887111 13 138 17.0 16.5 16.8 0.7 213 chr2L 15886898 intergenic not near genes chr2L 15887004 intergenic not near genes chr2L 15887111 intergenic not near genes chr2L_13_15885001 chr2L_15885001 RAL-849 936 chr2L 15906131 15906212 chr2L 15906270 15906341 37 136 4.5 7.5 6.0 5.3 210 chr2L 15906131 intron beat-Ib - chr2L 15906236 intron beat-Ib - chr2L 15906341 exon beat-Ib - chr2L_37_15905001 chr2L_15905001 RAL-849 937 chr2L 15907307 15907360 chr2L 15907711 15907765 8 405 25.5 14.5 20.0 0.4 458 chr2L 15907307 intron beat-Ib - chr2L 15907536 intron beat-Ib - chr2L 15907765 intron beat-Ib - chr2L_8_15905001 chr2L_15905001 RAL-849 938 chr2L 15919761 15919799 chr2L 15919945 15919983 6 184 18.0 25.5 21.8 0.3 222 chr2L 15919761 intron beat-Ib - chr2L 15919872 intron beat-Ib - chr2L 15919983 intron beat-Ib - chr2L_6_15915001 chr2L_15915001 RAL-849 939 chr2L 15930900 15930935 chr2L 15931021 15931077 9 134 12.0 22.5 17.2 0.5 177 chr2L 15930900 intron beat-Ib - chr2L 15930988 intron beat-Ib - chr2L 15931077 intron beat-Ib - chr2L_9_15930001 chr2L_15930001 RAL-849 940 chr2L 15935142 15935190 chr2L 15935281 15935329 10 139 9.5 0.0 4.8 1.7 187 chr2L 15935142 intron beat-Ib - chr2L 15935236 intron beat-Ib - chr2L 15935329 intron beat-Ib - chr2L_10_15935001 chr2L_15935001 RAL-849 941 chr2L 15955980 15956005 chr2L 15957497 15957522 hobo 11 1517 20.5 10.0 15.2 0.7 1542 chr2L 15955980 intron beat-Ib - chr2L 15956751 intron beat-Ib - chr2L 15957522 intron beat-Ib - chr2L_11_15955001 chr2L_15955001 RAL-849 942 chr2L 15956009 15956044 chr2L 15957491 15957561 hobo 20 1515 10.5 9.5 10.0 1.8 1552 chr2L 15956009 intron beat-Ib - chr2L 15956785 intron beat-Ib - chr2L 15957561 intron beat-Ib - chr2L_20_15955001 chr2L_15955001 RAL-849 943 chr2L 15971926 15971994 chr2L 15972070 15972142 6 146 7.0 13.0 10.0 0.5 216 chr2L 15971926 intergenic not near genes chr2L 15972034 intergenic not near genes chr2L 15972142 intergenic not near genes chr2L_6_15970001 chr2L_15970001 RAL-849 944 chr2L 16001443 16001493 chr2L 16001581 16001631 10 138 11.0 16.5 13.8 0.7 188 chr2L 16001443 intron beat-Ic + chr2L 16001537 intron beat-Ic + chr2L 16001631 intron beat-Ic + chr2L_10_16000001 chr2L_16000001 RAL-849 945 chr2L 16005525 16005581 chr2L 16005677 16005733 8 152 2.0 6.5 4.2 1.5 208 chr2L 16005525 intron beat-Ic + chr2L 16005629 intron beat-Ic + chr2L 16005733 intron beat-Ic + chr2L_8_16005001 chr2L_16005001 RAL-849 946 chr2L 16008654 16008677 chr2L 16008805 16008828 5 151 2.5 3.0 2.8 1.3 174 chr2L 16008654 intron beat-Ic + chr2L 16008741 intron beat-Ic + chr2L 16008828 intron beat-Ic + chr2L_5_16005001 chr2L_16005001 RAL-849 947 chr2L 16056129 16056158 chr2L 16056255 16056284 5 126 11.0 11.0 11.0 0.4 155 chr2L 16056129 intron beat-Ia + chr2L 16056206 intron beat-Ia + chr2L 16056284 exon beat-Ia + chr2L_5_16055001 chr2L_16055001 RAL-849 948 chr2L 16069225 16069294 chr2L 16069352 16069426 15 131 16.5 16.0 16.2 0.9 201 chr2L 16069225 intron beat-Ia + chr2L 16069326 intron beat-Ia + chr2L 16069426 intron beat-Ia + chr2L_15_16065001 chr2L_16065001 RAL-849 949 chr2L 16071771 16071771 chr2L 16217659 16217660 copia 20 145889 31.5 30.0 30.8 0.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_20_16140001 chr2L_16140001 RAL-849 950 chr2L 16098873 16098933 chr2L 16099011 16099071 5 138 18.0 16.0 17.0 0.3 198 chr2L 16098873 intergenic not near genes chr2L 16098972 intergenic not near genes chr2L 16099071 intergenic not near genes chr2L_5_16095001 chr2L_16095001 RAL-849 951 chr2L 16123489 16123558 chr2L 16123634 16123706 9 145 15.5 12.0 13.8 0.6 217 chr2L 16123489 intergenic not near genes chr2L 16123598 intergenic not near genes chr2L 16123706 intergenic not near genes chr2L_9_16120001 chr2L_16120001 RAL-849 952 chr2L 16139303 16139366 chr2L 16139891 16139954 10 588 10.0 10.0 10.0 0.9 651 chr2L 16139303 intergenic not near genes chr2L 16139628 intergenic not near genes chr2L 16139954 intergenic not near genes chr2L_10_16135001 chr2L_16135001 RAL-849 953 chr2L 16141111 16141188 chr2L 16146368 16146445 copia 13 5257 6.5 6.5 6.5 1.7 5334 chr2L 16141111 intergenic not near genes chr2L 16143778 intergenic not near genes chr2L 16146445 intergenic not near genes chr2L_13_16140001 chr2L_16140001 RAL-849 954 chr2L 16153693 16153759 chr2L 16160811 16160877 297 22 7118 11.5 9.5 10.5 1.9 7184 chr2L 16153693 intergenic not near genes chr2L 16157285 intergenic not near genes chr2L 16160877 intergenic not near genes chr2L_22_16155001 chr2L_16155001 RAL-849 955 chr2L 16181321 16181389 chr2L 16181621 16181689 17 300 7.5 17.5 12.5 1.3 368 chr2L 16181321 intron Ca-alpha1D + chr2L 16181505 intron Ca-alpha1D + chr2L 16181689 intron Ca-alpha1D + chr2L_17_16180001 chr2L_16180001 RAL-849 956 chr2L 16207021 16207088 chr2L 16207148 16207215 20 127 7.5 3.5 5.5 3.1 194 chr2L 16207021 intergenic not near genes chr2L 16207118 intergenic not near genes chr2L 16207215 intergenic not near genes chr2L_20_16205001 chr2L_16205001 RAL-849 957 chr2L 16210453 16210516 chr2L 16210582 16210643 11 126 12.0 17.5 14.8 0.7 190 chr2L 16210453 intergenic not near genes chr2L 16210548 intergenic not near genes chr2L 16210643 intergenic not near genes chr2L_11_16210001 chr2L_16210001 RAL-849 958 chr2L 16213275 16213301 chr2L 16213410 16213436 7 135 2.5 0.0 1.2 3.2 161 chr2L 16213275 3` UTR CG31819 + chr2L 16213356 intergenic CG31819 + chr2L 16213436 intergenic CG31819 + chr2L_7_16210001 chr2L_16210001 RAL-849 959 chr2L 16215069 16215122 chr2L 16215207 16215250 4 133 11.5 16.5 14.0 0.3 181 chr2L 16215069 intergenic not near genes chr2L 16215160 intergenic not near genes chr2L 16215250 intergenic not near genes chr2L_4_16215001 chr2L_16215001 RAL-849 960 chr2L 9084336 9084340 chr2L 16217660 16217660 9 7133322 30.5 30.0 30.2 0.3 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-849 961 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 9 145889 31.5 30.0 30.8 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_16140001 chr2L_16140001 RAL-849 962 chr2L 16224763 16224923 chr2L 16224923 16225056 12 160 16.0 16.5 16.2 0.7 293 chr2L 16224763 intergenic not near genes chr2L 16224910 intergenic not near genes chr2L 16225056 intergenic not near genes chr2L_12_16220001 chr2L_16220001 RAL-849 963 chr2L 16226137 16226212 chr2L 16226274 16226349 15 137 21.5 20.0 20.8 0.7 212 chr2L 16226137 intergenic not near genes chr2L 16226243 intergenic not near genes chr2L 16226349 intergenic not near genes chr2L_15_16225001 chr2L_16225001 RAL-849 964 chr2L 16242022 16242055 chr2L 16242164 16242197 16 142 10.5 0.0 5.2 2.6 175 chr2L 16242022 5` UTR CG42818 + chr2L 16242110 exon CG42818 + chr2L 16242197 exon CG42818 + chr2L_16_16240001 chr2L_16240001 RAL-849 965 chr2L 16243176 16243374 chr2L 16243303 16243504 45 128 0.0 0.0 0.0 45.0 328 chr2L 16243176 exon CG42818 + chr2L 16243340 exon CG42818 + chr2L 16243504 exon CG42818 + chr2L_45_16240001 chr2L_16240001 RAL-849 966 chr2L 16254868 16254919 chr2L 16255177 16255228 8 309 15.0 20.0 17.5 0.4 360 chr2L 16254868 intron PRL-1 - chr2L 16255048 intron PRL-1 - chr2L 16255228 intron PRL-1 - chr2L_8_16255001 chr2L_16255001 RAL-849 967 chr2L 16280235 16280259 chr2L 16281454 16281479 1360 9 1217 11.5 15.5 13.5 0.6 1244 chr2L 16280235 intron crp - chr2L 16280857 intron crp - chr2L 16281479 intron crp - chr2L_9_16280001 chr2L_16280001 RAL-849 968 chr2L 16280261 16280286 chr2L 16281430 16281474 1360 9 1204 8.0 9.0 8.5 0.9 1213 chr2L 16280261 intron crp - chr2L 16280868 intron crp - chr2L 16281474 intron crp - chr2L_9_16280001 chr2L_16280001 RAL-849 969 chr2L 16298681 16298746 chr2L 16298810 16298859 13 120 13.0 19.5 16.2 0.8 178 chr2L 16298681 intron heix - chr2L 16298770 intron heix - chr2L 16298859 intron heix - chr2L_13_16295001 chr2L_16295001 RAL-849 970 chr2L 16354733 16354783 chr2L 16354874 16354925 10 142 30.0 26.5 28.2 0.3 192 chr2L 16354733 intergenic CaBP1 -,CG4455 + chr2L 16354829 intergenic CaBP1 -,CG4455 + chr2L 16354925 3` UTR CaBP1 - chr2L_10_16350001 chr2L_16350001 RAL-849 971 chr2L 16363910 16363975 chr2L 16364206 16364271 22 296 0.0 8.5 4.2 4.2 361 chr2L 16363910 intergenic not near genes chr2L 16364090 intergenic not near genes chr2L 16364271 intergenic not near genes chr2L_22_16360001 chr2L_16360001 RAL-849 972 chr2L 16365439 16365470 chr2L 16365639 16365670 6 200 3.0 4.5 3.8 1.2 231 chr2L 16365439 intergenic jhamt + chr2L 16365554 intergenic jhamt + chr2L 16365670 intergenic jhamt + chr2L_6_16365001 chr2L_16365001 RAL-849 973 chr2L 16391765 16391817 chr2L 16391886 16391943 12 126 2.0 3.5 2.8 3.2 178 chr2L 16391765 intergenic not near genes chr2L 16391854 intergenic not near genes chr2L 16391943 intergenic not near genes chr2L_12_16390001 chr2L_16390001 RAL-849 974 chr2L 16398488 16398495 chr2L 16398616 16398623 4 128 18.0 18.5 18.2 0.2 135 chr2L 16398488 intergenic not near genes chr2L 16398556 intergenic not near genes chr2L 16398623 intergenic not near genes chr2L_4_16395001 chr2L_16395001 RAL-849 975 chr2L 16407382 16407420 chr2L 16407562 16407600 11 180 14.0 13.5 13.8 0.7 218 chr2L 16407382 intron CG5888 - chr2L 16407491 intron CG5888 - chr2L 16407600 intron CG5888 - chr2L_11_16405001 chr2L_16405001 RAL-849 976 chr2L 16434065 16434131 chr2L 16434197 16434262 6 132 15.0 15.0 15.0 0.4 197 chr2L 16434065 intron CG5888 - chr2L 16434164 intron CG5888 - chr2L 16434262 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-849 977 chr2L 16435931 16435970 chr2L 16436063 16436102 6 128 14.5 17.0 15.8 0.4 171 chr2L 16435931 intron CG5888 - chr2L 16436016 intron CG5888 - chr2L 16436102 intron CG5888 - chr2L_6_16435001 chr2L_16435001 RAL-849 978 chr2L 16450545 16450618 chr2L 16450778 16450851 11 233 3.0 20.5 11.8 0.9 306 chr2L 16450545 intergenic Idgf2 + chr2L 16450698 intergenic Idgf2 +,Idgf3 + chr2L 16450851 intergenic Idgf3 +,Idgf2 + chr2L_11_16450001 chr2L_16450001 RAL-849 979 chr2L 16458780 16458854 chr2L 16459026 16459101 8 246 0.0 4.5 2.2 2.5 321 chr2L 16458780 intergenic not near genes chr2L 16458940 intergenic not near genes chr2L 16459101 intergenic not near genes chr2L_8_16455001 chr2L_16455001 RAL-849 980 chr2L 16468248 16468299 chr2L 16468389 16468440 4 140 9.0 12.0 10.5 0.3 192 chr2L 16468248 intron dac - chr2L 16468344 intron dac - chr2L 16468440 intron dac - chr2L_4_16465001 chr2L_16465001 RAL-849 981 chr2L 16487856 16487921 chr2L 16488016 16488080 12 160 17.5 18.5 18.0 0.6 224 chr2L 16487856 intergenic CG4580 + chr2L 16487968 intergenic CG4580 + chr2L 16488080 intergenic CG4580 + chr2L_12_16485001 chr2L_16485001 RAL-849 982 chr2L 16492688 16492755 chr2L 16492831 16492898 21 143 18.5 24.0 21.2 0.9 210 chr2L 16492688 intron Tpr2 + chr2L 16492793 intron Tpr2 + chr2L 16492898 intron Tpr2 + chr2L_21_16490001 chr2L_16490001 RAL-849 983 chr2L 16504060 16504126 chr2L 16504343 16504377 19 280 18.0 17.5 17.8 1.0 317 chr2L 16504060 intron Tpr2 + chr2L 16504218 intron Tpr2 + chr2L 16504377 intron Tpr2 + chr2L_19_16500001 chr2L_16500001 RAL-849 984 chr2L 16507888 16507967 chr2L 16508021 16508105 10 136 21.5 21.5 21.5 0.4 217 chr2L 16507888 intergenic CG5953 -,Tpr2 + chr2L 16507996 intergenic CG5953 -,Tpr2 + chr2L 16508105 3` UTR CG5953 - chr2L_10_16505001 chr2L_16505001 RAL-849 985 chr2L 16511920 16511985 chr2L 16519084 16519149 HMS-Beagle 20 7164 7.0 8.0 7.5 2.4 7229 chr2L 16511920 intron CG5953 - chr2L 16515534 intron CG5953 - chr2L 16519149 intron CG5953 - chr2L_20_16515001 chr2L_16515001 RAL-849 986 chr2L 16547145 16547214 chr2L 16547286 16547355 6 141 15.0 15.5 15.2 0.4 210 chr2L 16547145 intron CG42389 + chr2L 16547250 intron CG42389 + chr2L 16547355 intron CG42389 + chr2L_6_16545001 chr2L_16545001 RAL-849 987 chr2L 16548447 16548472 chr2L 16548618 16548643 5 171 17.0 5.0 11.0 0.4 196 chr2L 16548447 intron CG42389 + chr2L 16548545 intron CG42389 + chr2L 16548643 intron CG42389 + chr2L_5_16545001 chr2L_16545001 RAL-849 988 chr2L 16561358 16561429 chr2L 16561517 16561580 9 156 8.5 6.0 7.2 1.1 222 chr2L 16561358 intron CG42389 + chr2L 16561469 intron CG42389 + chr2L 16561580 intron CG42389 + chr2L_9_16560001 chr2L_16560001 RAL-849 989 chr2L 16570815 16570845 chr2L 16570931 16570971 7 125 3.5 3.0 3.2 1.7 156 chr2L 16570815 intron CG42389 + chr2L 16570893 intron CG42389 + chr2L 16570971 intron CG42389 + chr2L_7_16570001 chr2L_16570001 RAL-849 990 chr2L 16572162 16572224 chr2L 16572305 16572337 4 136 9.5 10.0 9.8 0.4 175 chr2L 16572162 intron CG42389 + chr2L 16572250 intron CG42389 + chr2L 16572337 intron CG42389 + chr2L_4_16570001 chr2L_16570001 RAL-849 991 chr2L 16588782 16588819 chr2L 16588955 16588992 6 173 11.5 13.0 12.2 0.5 210 chr2L 16588782 intron CG42389 + chr2L 16588887 intron CG42389 + chr2L 16588992 intron CG42389 + chr2L_6_16585001 chr2L_16585001 RAL-849 992 chr2L 16616547 16616602 chr2L 16616681 16616736 15 131 17.0 22.0 19.5 0.7 189 chr2L 16616547 intron CG42389 + chr2L 16616642 intron CG42389 + chr2L 16616736 intron CG42389 + chr2L_15_16615001 chr2L_16615001 RAL-849 993 chr2L 16670369 16670443 chr2L 16670496 16670570 20 127 8.0 4.0 6.0 2.9 201 chr2L 16670369 intron Trpgamma - chr2L 16670470 intron Trpgamma - chr2L 16670570 intron Trpgamma - chr2L_20_16670001 chr2L_16670001 RAL-849 994 chr2L 16694106 16694156 chr2L 16694223 16694292 23 127 11.5 19.0 15.2 1.4 186 chr2L 16694106 intron grp + chr2L 16694199 intron grp + chr2L 16694292 intron grp + chr2L_23_16690001 chr2L_16690001 RAL-849 995 chr2L 16695214 16695281 chr2L 16695348 16695415 17 134 10.5 8.5 9.5 1.6 201 chr2L 16695214 intron grp + chr2L 16695314 intron grp + chr2L 16695415 intron grp + chr2L_17_16695001 chr2L_16695001 RAL-849 996 chr2L 16697018 16697254 chr2L 16697218 16697393 10 224 5.0 0.0 2.5 2.9 375 chr2L 16697018 intron grp + chr2L 16697206 intron grp + chr2L 16697393 intron,3` UTR grp +,CR44975 - chr2L_10_16695001 chr2L_16695001 RAL-849 997 chr2L 16764931 16764993 chr2L 16765061 16765123 11 130 9.5 5.5 7.5 1.3 192 chr2L 16764931 intergenic not near genes chr2L 16765027 intergenic not near genes chr2L 16765123 intergenic not near genes chr2L_11_16765001 chr2L_16765001 RAL-849 998 chr2L 16864334 16864346 chr2L 16864483 16864495 4 149 35.5 29.0 32.2 0.1 161 chr2L 16864334 intergenic not near genes chr2L 16864414 intergenic not near genes chr2L 16864495 intergenic not near genes chr2L_4_16860001 chr2L_16860001 RAL-849 999 chr2L 16864351 16864398 chr2L 16864478 16864547 14 146 23.0 27.5 25.2 0.5 196 chr2L 16864351 intergenic not near genes chr2L 16864449 intergenic not near genes chr2L 16864547 intergenic not near genes chr2L_14_16860001 chr2L_16860001 RAL-849 1000 chr2L 16878845 16878920 chr2L 16878981 16879058 14 138 22.0 29.0 25.5 0.5 213 chr2L 16878845 exon CG32832 - chr2L 16878952 intron CG32832 - chr2L 16879058 intron CG32832 - chr2L_14_16875001 chr2L_16875001 RAL-849 1001 chr2L 16919979 16920034 chr2L 16920108 16920163 11 128 20.5 20.0 20.2 0.5 184 chr2L 16919979 intergenic not near genes chr2L 16920071 intergenic not near genes chr2L 16920163 intergenic not near genes chr2L_11_16920001 chr2L_16920001 RAL-849 1002 chr2L 16952639 16952696 chr2L 16952798 16952855 13 158 12.5 6.5 9.5 1.2 216 chr2L 16952639 intergenic not near genes chr2L 16952747 intergenic not near genes chr2L 16952855 intergenic not near genes chr2L_13_16950001 chr2L_16950001 RAL-849 1003 chr2L 16958061 16958115 chr2L 16962899 16962953 Doc 16 4837 6.0 7.0 6.5 2.1 4892 chr2L 16958061 intergenic not near genes chr2L 16960507 intergenic not near genes chr2L 16962953 intergenic not near genes chr2L_16_16960001 chr2L_16960001 RAL-849 1004 chr2L 16998955 16999031 chr2L 16999082 16999160 4 128 0.5 3.5 2.0 1.3 205 chr2L 16998955 intergenic CR45357 +,CR45356 + chr2L 16999058 intergenic CR45357 + chr2L 16999160 intergenic CR45357 + chr2L_4_16995001 chr2L_16995001 RAL-849 1005 chr2L 17005363 17005428 chr2L 17005510 17005575 17 145 6.0 8.5 7.2 2.1 212 chr2L 17005363 intergenic not near genes chr2L 17005469 intergenic not near genes chr2L 17005575 intergenic not near genes chr2L_17_17005001 chr2L_17005001 RAL-849 1006 chr2L 17032452 17032522 chr2L 17032587 17032657 21 135 13.5 14.5 14.0 1.4 205 chr2L 17032452 intergenic not near genes chr2L 17032554 intergenic not near genes chr2L 17032657 intergenic not near genes chr2L_21_17030001 chr2L_17030001 RAL-849 1007 chr2L 17033891 17033938 chr2L 17034022 17034074 10 135 11.0 12.0 11.5 0.8 183 chr2L 17033891 intergenic not near genes chr2L 17033982 intergenic not near genes chr2L 17034074 intergenic not near genes chr2L_10_17030001 chr2L_17030001 RAL-849 1008 chr2L 17057959 17058023 chr2L 17058090 17058154 16 131 19.0 19.0 19.0 0.8 195 chr2L 17057959 intergenic not near genes chr2L 17058056 intergenic not near genes chr2L 17058154 intergenic not near genes chr2L_16_17055001 chr2L_17055001 RAL-849 1009 chr2L 17058397 17058406 chr2L 17058600 17058609 4 203 14.0 17.0 15.5 0.2 212 chr2L 17058397 intergenic not near genes chr2L 17058503 intergenic not near genes chr2L 17058609 intergenic not near genes chr2L_4_17055001 chr2L_17055001 RAL-849 1010 chr2L 17062710 17062751 chr2L 17062842 17062883 7 132 15.0 13.0 14.0 0.5 173 chr2L 17062710 intergenic not near genes chr2L 17062796 intergenic not near genes chr2L 17062883 intergenic not near genes chr2L_7_17060001 chr2L_17060001 RAL-849 1011 chr2L 17063013 17063065 chr2L 17065315 17065361 12 2294 38.5 28.5 33.5 0.3 2348 chr2L 17063013 intergenic not near genes chr2L 17064187 intergenic not near genes chr2L 17065361 intergenic not near genes chr2L_12_17060001 chr2L_17060001 RAL-849 1012 chr2L 17070158 17070209 chr2L 17070304 17070355 8 146 9.0 4.0 6.5 1.1 197 chr2L 17070158 intergenic not near genes chr2L 17070256 intergenic not near genes chr2L 17070355 intergenic not near genes chr2L_8_17070001 chr2L_17070001 RAL-849 1013 chr2L 17087331 17087397 chr2L 17087499 17087564 20 168 7.0 7.0 7.0 2.5 233 chr2L 17087331 intergenic CG12620 + chr2L 17087448 intergenic CG12620 + chr2L 17087564 intergenic CG12620 + chr2L_20_17085001 chr2L_17085001 RAL-849 1014 chr2L 17101853 17101910 chr2L 17101980 17102037 14 126 12.0 8.0 10.0 1.3 184 chr2L 17101853 intergenic not near genes chr2L 17101945 intergenic not near genes chr2L 17102037 intergenic not near genes chr2L_14_17100001 chr2L_17100001 RAL-849 1015 chr2L 17102971 17103034 chr2L 17103109 17103162 14 137 12.0 16.0 14.0 0.9 191 chr2L 17102971 intergenic not near genes chr2L 17103066 intergenic not near genes chr2L 17103162 intergenic not near genes chr2L_14_17100001 chr2L_17100001 RAL-849 1016 chr2L 17129805 17129833 chr2L 17129960 17129988 8 155 19.0 18.5 18.8 0.4 183 chr2L 17129805 intergenic not near genes chr2L 17129896 intergenic not near genes chr2L 17129988 intergenic not near genes chr2L_8_17125001 chr2L_17125001 RAL-849 1017 chr2L 17131401 17131453 chr2L 17131528 17131566 8 125 12.0 18.0 15.0 0.5 165 chr2L 17131401 5` UTR,5` UTR CG34106 +,beat-IIIa + chr2L 17131484 5` UTR,5` UTR CG34106 +,beat-IIIa + chr2L 17131566 5` UTR,5` UTR CG34106 +,beat-IIIa + chr2L_8_17130001 chr2L_17130001 RAL-849 1018 chr2L 17134854 17134900 chr2L 17135060 17135095 5 201 16.0 17.5 16.8 0.3 241 chr2L 17134854 intron,intron CG34106 +,beat-IIIa + chr2L 17134974 intron,intron CG34106 +,beat-IIIa + chr2L 17135095 intron,intron CG34106 +,beat-IIIa + chr2L_5_17130001 chr2L_17130001 RAL-849 1019 chr2L 17158679 17158744 chr2L 17158832 17158896 17 152 3.5 2.5 3.0 4.2 217 chr2L 17158679 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158788 intron,intron CG34106 +,beat-IIIa + chr2L 17158896 intron,intron CG34106 +,beat-IIIa + chr2L_17_17155001 chr2L_17155001 RAL-849 1020 chr2L 17167519 17167592 chr2L 17167810 17167883 pogo 19 291 6.5 5.5 6.0 2.7 364 chr2L 17167519 intron,intron CG34106 +,beat-IIIa + chr2L 17167701 intron,intron CG34106 +,beat-IIIa + chr2L 17167883 intron,intron CG34106 +,beat-IIIa + chr2L_19_17165001 chr2L_17165001 RAL-849 1021 chr2L 17168153 17168224 chr2L 17168981 17169051 11 828 13.0 25.5 19.2 0.5 898 chr2L 17168153 intron,intron CG34106 +,beat-IIIa + chr2L 17168602 intron,intron CG34106 +,beat-IIIa + chr2L 17169051 intron,intron CG34106 +,beat-IIIa + chr2L_11_17165001 chr2L_17165001 RAL-849 1022 chr2L 17199116 17199186 chr2L 17200633 17200703 hobo 14 1517 9.0 2.5 5.8 2.1 1587 chr2L 17199116 intron beat-IIIc - chr2L 17199910 intron beat-IIIc - chr2L 17200703 intron beat-IIIc - chr2L_14_17195001 chr2L_17195001 RAL-849 1023 chr2L 17208112 17208167 chr2L 17208241 17208306 10 138 18.0 14.0 16.0 0.6 194 chr2L 17208112 intron beat-IIIc - chr2L 17208209 intron beat-IIIc - chr2L 17208306 intron beat-IIIc - chr2L_10_17205001 chr2L_17205001 RAL-849 1024 chr2L 17216650 17216708 chr2L 17216906 17216933 10 252 18.0 17.0 17.5 0.5 283 chr2L 17216650 intron beat-IIIc - chr2L 17216792 intron beat-IIIc - chr2L 17216933 intron beat-IIIc - chr2L_10_17215001 chr2L_17215001 RAL-849 1025 chr2L 17219904 17219931 chr2L 17220035 17220062 7 131 11.5 8.0 9.8 0.6 158 chr2L 17219904 intron beat-IIIc - chr2L 17219983 intron beat-IIIc - chr2L 17220062 intron beat-IIIc - chr2L_7_17215001 chr2L_17215001 RAL-849 1026 chr2L 17261175 17261233 chr2L 17261316 17261374 16 141 3.5 5.5 4.5 2.9 199 chr2L 17261175 intergenic beat-IIIc - chr2L 17261274 intergenic not near genes chr2L 17261374 intergenic not near genes chr2L_16_17260001 chr2L_17260001 RAL-849 1027 chr2L 17264701 17264759 chr2L 17264831 17264889 16 130 6.5 3.5 5.0 2.7 188 chr2L 17264701 intergenic not near genes chr2L 17264795 intergenic not near genes chr2L 17264889 intergenic not near genes chr2L_16_17260001 chr2L_17260001 RAL-849 1028 chr2L 17273153 17273205 chr2L 17277986 17278038 F-element 18 4833 8.5 10.0 9.2 1.8 4885 chr2L 17273153 intergenic not near genes chr2L 17275596 intergenic not near genes chr2L 17278038 intergenic not near genes chr2L_18_17275001 chr2L_17275001 RAL-849 1029 chr2L 17278846 17278913 chr2L 17278978 17279014 10 125 14.5 14.0 14.2 0.7 168 chr2L 17278846 intergenic not near genes chr2L 17278930 intergenic not near genes chr2L 17279014 intergenic not near genes chr2L_10_17275001 chr2L_17275001 RAL-849 1030 chr2L 17286977 17286993 chr2L 17287139 17287148 5 159 17.0 5.0 11.0 0.4 171 chr2L 17286977 exon CG15140 + chr2L 17287062 exon CG15140 + chr2L 17287148 exon CG15140 + chr2L_5_17285001 chr2L_17285001 RAL-849 1031 chr2L 17289199 17289229 chr2L 17289328 17289348 7 128 15.0 12.5 13.8 0.5 149 chr2L 17289199 intergenic not near genes chr2L 17289274 intergenic not near genes chr2L 17289348 intergenic not near genes chr2L_7_17285001 chr2L_17285001 RAL-849 1032 chr2L 17304295 17304329 chr2L 17304432 17304466 9 137 6.5 11.5 9.0 0.9 171 chr2L 17304295 intergenic not near genes chr2L 17304380 intergenic not near genes chr2L 17304466 intergenic not near genes chr2L_9_17300001 chr2L_17300001 RAL-849 1033 chr2L 17327859 17327903 chr2L 17327995 17328039 9 136 25.5 20.5 23.0 0.4 180 chr2L 17327859 intergenic not near genes chr2L 17327949 intergenic not near genes chr2L 17328039 intergenic not near genes chr2L_9_17325001 chr2L_17325001 RAL-849 1034 chr2L 17333538 17333616 chr2L 17333673 17333751 7 135 20.0 19.5 19.8 0.3 213 chr2L 17333538 intergenic not near genes chr2L 17333644 intergenic not near genes chr2L 17333751 intergenic not near genes chr2L_7_17330001 chr2L_17330001 RAL-849 1035 chr2L 17335506 17335567 chr2L 17336722 17336783 1360 10 1222 2.0 5.0 3.5 2.2 1277 chr2L 17335506 intergenic not near genes chr2L 17336144 intergenic not near genes chr2L 17336783 intergenic not near genes chr2L_10_17335001 chr2L_17335001 RAL-849 1036 chr2L 17339089 17339134 chr2L 17339216 17339261 15 127 16.5 10.5 13.5 1.0 172 chr2L 17339089 intergenic not near genes chr2L 17339175 intergenic not near genes chr2L 17339261 intergenic not near genes chr2L_15_17335001 chr2L_17335001 RAL-849 1037 chr2L 17343535 17343561 chr2L 17343678 17343694 8 142 14.0 21.5 17.8 0.4 159 chr2L 17343535 intergenic not near genes chr2L 17343614 intergenic not near genes chr2L 17343694 intergenic not near genes chr2L_8_17340001 chr2L_17340001 RAL-849 1038 chr2L 17372299 17372355 chr2L 17372429 17372485 7 128 4.5 6.0 5.2 1.1 186 chr2L 17372299 intron Lrch - chr2L 17372392 intron Lrch - chr2L 17372485 intron Lrch - chr2L_7_17370001 chr2L_17370001 RAL-849 1039 chr2L 17379663 17379704 chr2L 17379798 17379839 13 135 6.5 3.0 4.8 2.2 176 chr2L 17379663 intron Lrch - chr2L 17379751 intron Lrch - chr2L 17379839 intron Lrch - chr2L_13_17375001 chr2L_17375001 RAL-849 1040 chr2L 17419252 17419314 chr2L 17419378 17419440 16 126 4.5 7.5 6.0 2.3 188 chr2L 17419252 intron Dif - chr2L 17419346 intron Dif - chr2L 17419440 intron Dif - chr2L_16_17415001 chr2L_17415001 RAL-849 1041 chr2L 17420605 17420888 chr2L 17420732 17421019 18 127 9.0 14.5 11.8 1.4 414 chr2L 17420605 intron Dif - chr2L 17420812 intron Dif - chr2L 17421019 intron Dif - chr2L_18_17420001 chr2L_17420001 RAL-849 1042 chr2L 17424660 17424719 chr2L 17424822 17424881 8 162 17.5 13.0 15.2 0.5 221 chr2L 17424660 intron Dif - chr2L 17424770 intron Dif - chr2L 17424881 intron Dif - chr2L_8_17420001 chr2L_17420001 RAL-849 1043 chr2L 17431945 17432040 chr2L 17432120 17432198 1360 4 166 0.0 3.5 1.8 1.4 253 chr2L 17431945 intron Dif - chr2L 17432072 intron Dif - chr2L 17432198 intron Dif - chr2L_4_17430001 chr2L_17430001 RAL-849 1044 chr2L 17432581 17432661 chr2L 17432708 17432781 14 122 19.0 18.5 18.8 0.7 200 chr2L 17432581 intron Dif - chr2L 17432681 intron Dif - chr2L 17432781 intron Dif - chr2L_14_17430001 chr2L_17430001 RAL-849 1045 chr2L 17466375 17466444 chr2L 17466519 17466587 11 143 16.5 21.5 19.0 0.6 212 chr2L 17466375 intron BicD - chr2L 17466481 intron BicD - chr2L 17466587 intron BicD - chr2L_11_17465001 chr2L_17465001 RAL-849 1046 chr2L 17491818 17491875 chr2L 17491948 17491981 13 132 20.0 14.0 17.0 0.7 163 chr2L 17491818 intron qua - chr2L 17491900 intron qua - chr2L 17491981 intron qua - chr2L_13_17490001 chr2L_17490001 RAL-849 1047 chr2L 17503179 17503246 chr2L 17503301 17503373 21 127 23.0 24.5 23.8 0.8 194 chr2L 17503179 intron Dhc36C + chr2L 17503276 intron Dhc36C + chr2L 17503373 intron Dhc36C + chr2L_21_17500001 chr2L_17500001 RAL-849 1048 chr2L 17577683 17577735 chr2L 17577809 17577861 12 126 20.0 21.5 20.8 0.6 178 chr2L 17577683 intergenic not near genes chr2L 17577772 intergenic not near genes chr2L 17577861 intergenic not near genes chr2L_12_17575001 chr2L_17575001 RAL-849 1049 chr2L 17584709 17584773 chr2L 17584861 17584919 11 150 12.5 14.0 13.2 0.8 210 chr2L 17584709 intergenic CR45112 -,CR45111 + chr2L 17584814 3` UTR CR45112 - chr2L 17584919 3` UTR CR45112 - chr2L_11_17580001 chr2L_17580001 RAL-849 1050 chr2L 17592755 17592816 chr2L 17592897 17592958 12 142 18.5 20.0 19.2 0.6 203 chr2L 17592755 intron Sytalpha + chr2L 17592856 intron Sytalpha + chr2L 17592958 intron Sytalpha + chr2L_12_17590001 chr2L_17590001 RAL-849 1051 chr2L 17607439 17607477 chr2L 17607587 17607625 5 147 20.5 13.0 16.8 0.3 186 chr2L 17607439 intergenic CR44412 - chr2L 17607532 intergenic CR44412 - chr2L 17607625 intergenic CR44412 - chr2L_5_17605001 chr2L_17605001 RAL-849 1052 chr2L 17613440 17613472 chr2L 17613687 17613719 5 247 9.0 17.5 13.2 0.4 279 chr2L 17613440 intergenic not near genes chr2L 17613580 intergenic not near genes chr2L 17613719 intergenic not near genes chr2L_5_17610001 chr2L_17610001 RAL-849 1053 chr2L 17669068 17669118 chr2L 17669195 17669245 10 127 15.0 20.5 17.8 0.5 177 chr2L 17669068 intron CadN - chr2L 17669156 intron CadN - chr2L 17669245 intron CadN - chr2L_10_17665001 chr2L_17665001 RAL-849 1054 chr2L 17681201 17681265 chr2L 17681814 17681890 12 623 20.0 7.0 13.5 0.8 689 chr2L 17681201 intron CadN - chr2L 17681546 intron CadN - chr2L 17681890 intron CadN - chr2L_12_17680001 chr2L_17680001 RAL-849 1055 chr2L 17687476 17687521 chr2L 17692271 17692316 F-element 20 4794 7.0 6.5 6.8 2.6 4840 chr2L 17687476 intron CadN - chr2L 17689896 intron CadN - chr2L 17692316 intron CadN - chr2L_20_17685001 chr2L_17685001 RAL-849 1056 chr2L 17694065 17694131 chr2L 17694923 17694978 8 857 12.5 15.0 13.8 0.5 913 chr2L 17694065 intron CadN - chr2L 17694522 intron CadN - chr2L 17694978 intron CadN - chr2L_8_17690001 chr2L_17690001 RAL-849 1057 chr2L 17723750 17723791 chr2L 17723893 17723934 12 143 20.5 16.0 18.2 0.6 184 chr2L 17723750 intron CadN - chr2L 17723842 intron CadN - chr2L 17723934 intron CadN - chr2L_12_17720001 chr2L_17720001 RAL-849 1058 chr2L 17727818 17727872 chr2L 17729335 17729368 hobo 22 1516 5.0 10.0 7.5 2.6 1550 chr2L 17727818 intron CadN - chr2L 17728593 intron CadN - chr2L 17729368 intron CadN - chr2L_22_17725001 chr2L_17725001 RAL-849 1059 chr2L 17769262 17769454 chr2L 17769394 17769602 14 140 8.5 10.5 9.5 1.3 340 chr2L 17769262 intron CadN - chr2L 17769432 intron CadN - chr2L 17769602 intron CadN - chr2L_14_17765001 chr2L_17765001 RAL-849 1060 chr2L 17773142 17773201 chr2L 17773349 17773404 11 204 20.0 20.0 20.0 0.5 262 chr2L 17773142 intron CadN - chr2L 17773273 intron CadN - chr2L 17773404 intron CadN - chr2L_11_17770001 chr2L_17770001 RAL-849 1061 chr2L 17795974 17796040 chr2L 17796105 17796171 11 131 23.0 19.0 21.0 0.5 197 chr2L 17795974 intron CadN2 - chr2L 17796072 intron CadN2 - chr2L 17796171 intron CadN2 - chr2L_11_17795001 chr2L_17795001 RAL-849 1062 chr2L 17819872 17819946 chr2L 17825126 17825199 copia 20 5253 5.5 7.0 6.2 2.8 5327 chr2L 17819872 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825199 intron CadN2 - chr2L_20_17820001 chr2L_17820001 RAL-849 1063 chr2L 17859571 17859634 chr2L 17859707 17859770 12 136 23.5 22.0 22.8 0.5 199 chr2L 17859571 intron CadN2 - chr2L 17859670 intron CadN2 - chr2L 17859770 intron CadN2 - chr2L_12_17855001 chr2L_17855001 RAL-849 1064 chr2L 17863592 17863627 chr2L 17863797 17863832 5 205 10.0 9.5 9.8 0.5 240 chr2L 17863592 intron CadN2 - chr2L 17863712 intron CadN2 - chr2L 17863832 intron CadN2 - chr2L_5_17860001 chr2L_17860001 RAL-849 1065 chr2L 17865669 17865721 chr2L 17865789 17865856 14 132 14.5 17.0 15.8 0.8 187 chr2L 17865669 intron CadN2 - chr2L 17865762 intron CadN2 - chr2L 17865856 intron CadN2 - chr2L_14_17865001 chr2L_17865001 RAL-849 1066 chr2L 17879972 17880021 chr2L 17880109 17880158 10 133 11.5 20.0 15.8 0.6 186 chr2L 17879972 intergenic not near genes chr2L 17880065 intergenic not near genes chr2L 17880158 intergenic not near genes chr2L_10_17880001 chr2L_17880001 RAL-849 1067 chr2L 17911920 17911940 chr2L 17914148 17914176 pogo 7 2231 14.5 6.0 10.2 0.6 2256 chr2L 17911920 intergenic not near genes chr2L 17913048 intergenic not near genes chr2L 17914176 intergenic CG43271 - chr2L_7_17910001 chr2L_17910001 RAL-849 1068 chr2L 17911944 17911980 chr2L 17914146 17914208 pogo 10 2225 9.0 6.0 7.5 1.2 2264 chr2L 17911944 intergenic not near genes chr2L 17913076 intergenic not near genes chr2L 17914208 intergenic CG43271 - chr2L_10_17910001 chr2L_17910001 RAL-849 1069 chr2L 17924636 17924704 chr2L 17924805 17924873 12 169 12.0 14.0 13.0 0.9 237 chr2L 17924636 intergenic not near genes chr2L 17924754 intergenic not near genes chr2L 17924873 intergenic not near genes chr2L_12_17920001 chr2L_17920001 RAL-849 1070 chr2L 17942602 17942662 chr2L 17942849 17942909 10 247 7.5 10.0 8.8 1.0 307 chr2L 17942602 intergenic not near genes chr2L 17942756 intergenic not near genes chr2L 17942909 intergenic not near genes chr2L_10_17940001 chr2L_17940001 RAL-849 1071 chr2L 17943848 17943912 chr2L 17944001 17944065 16 153 18.0 18.5 18.2 0.8 217 chr2L 17943848 intergenic not near genes chr2L 17943956 intergenic not near genes chr2L 17944065 intergenic not near genes chr2L_16_17940001 chr2L_17940001 RAL-849 1072 chr2L 17951901 17951964 chr2L 17953418 17953481 hobo 23 1517 11.0 7.0 9.0 2.3 1580 chr2L 17951901 intergenic CR44398 -,CR44397 - chr2L 17952691 intergenic not near genes chr2L 17953481 intergenic not near genes chr2L_23_17950001 chr2L_17950001 RAL-849 1073 chr2L 17955827 17955887 chr2L 17955969 17956029 6 142 22.5 25.0 23.8 0.2 202 chr2L 17955827 intergenic not near genes chr2L 17955928 intergenic not near genes chr2L 17956029 intergenic not near genes chr2L_6_17955001 chr2L_17955001 RAL-849 1074 chr2L 17997858 17997901 chr2L 17997989 17998032 7 131 13.0 16.5 14.8 0.4 174 chr2L 17997858 intergenic not near genes chr2L 17997945 intergenic not near genes chr2L 17998032 intergenic not near genes chr2L_7_17995001 chr2L_17995001 RAL-849 1075 chr2L 17998404 17998478 chr2L 17998530 17998604 10 126 15.5 20.5 18.0 0.5 200 chr2L 17998404 intergenic not near genes chr2L 17998504 intergenic not near genes chr2L 17998604 intergenic not near genes chr2L_10_17995001 chr2L_17995001 RAL-849 1076 chr2L 18014621 18014664 chr2L 18014801 18014839 10 179 18.0 18.5 18.2 0.5 218 chr2L 18014621 intron rdo + chr2L 18014730 intron rdo + chr2L 18014839 intron rdo + chr2L_10_18010001 chr2L_18010001 RAL-849 1077 chr2L 18026935 18026998 chr2L 18027325 18027388 16 388 19.5 13.5 16.5 0.9 453 chr2L 18026935 intron rdo + chr2L 18027162 intron rdo + chr2L 18027388 intron rdo + chr2L_16_18025001 chr2L_18025001 RAL-849 1078 chr2L 18040688 18040751 chr2L 18040827 18040890 9 139 22.0 24.5 23.2 0.4 202 chr2L 18040688 intron rdo + chr2L 18040789 intron rdo + chr2L 18040890 intron rdo + chr2L_9_18040001 chr2L_18040001 RAL-849 1079 chr2L 18041391 18041461 chr2L 18041710 18041780 17 319 24.5 16.0 20.2 0.8 389 chr2L 18041391 intron rdo + chr2L 18041586 intron rdo + chr2L 18041780 intron rdo + chr2L_17_18040001 chr2L_18040001 RAL-849 1080 chr2L 18047002 18047004 chr2L 18047134 18047136 4 132 27.5 27.0 27.2 0.1 134 chr2L 18047002 intron rdo + chr2L 18047069 intron rdo + chr2L 18047136 intron rdo + chr2L_4_18045001 chr2L_18045001 RAL-849 1081 chr2L 18047005 18047052 chr2L 18047132 18047184 11 129 25.5 26.5 26.0 0.4 179 chr2L 18047005 intron rdo + chr2L 18047094 intron rdo + chr2L 18047184 intron rdo + chr2L_11_18045001 chr2L_18045001 RAL-849 1082 chr2L 18051835 18051899 chr2L 18061032 18061096 roo 16 9194 8.0 9.0 8.5 1.7 9261 chr2L 18051835 intron rdo + chr2L 18056466 intron rdo + chr2L 18061096 intron rdo + chr2L_16_18055001 chr2L_18055001 RAL-849 1083 chr2L 18106330 18106401 chr2L 18106486 18106557 6 156 8.0 9.0 8.5 0.6 227 chr2L 18106330 intergenic not near genes chr2L 18106444 intergenic not near genes chr2L 18106557 intergenic not near genes chr2L_6_18105001 chr2L_18105001 RAL-849 1084 chr2L 18110061 18110107 chr2L 18110211 18110257 6 145 13.5 18.0 15.8 0.4 196 chr2L 18110061 intergenic not near genes chr2L 18110159 intergenic not near genes chr2L 18110257 intergenic not near genes chr2L_6_18110001 chr2L_18110001 RAL-849 1085 chr2L 18184959 18185009 chr2L 18185123 18185174 7 165 14.5 13.5 14.0 0.5 215 chr2L 18184959 intron,5` UTR CG42750 -,CG7180 - chr2L 18185066 intron CG42750 - chr2L 18185174 intron,3` UTR CG42750 -,CR44900 - chr2L_7_18185001 chr2L_18185001 RAL-849 1086 chr2L 18191710 18191734 chr2L 18191841 18191865 6 131 21.5 12.5 17.0 0.3 155 chr2L 18191710 intron CG42750 - chr2L 18191788 intron CG42750 - chr2L 18191865 intron CG42750 - chr2L_6_18190001 chr2L_18190001 RAL-849 1087 chr2L 18197687 18197751 chr2L 18197825 18197889 19 133 30.0 22.0 26.0 0.7 202 chr2L 18197687 intron CG42750 - chr2L 18197788 intron CG42750 - chr2L 18197889 intron CG42750 - chr2L_19_18195001 chr2L_18195001 RAL-849 1088 chr2L 18218613 18218627 chr2L 18218751 18218765 6 138 18.0 19.0 18.5 0.3 152 chr2L 18218613 intron CG42750 - chr2L 18218689 intron CG42750 - chr2L 18218765 intron CG42750 - chr2L_6_18215001 chr2L_18215001 RAL-849 1089 chr2L 18221595 18221606 chr2L 18221722 18221733 6 127 19.5 17.0 18.2 0.3 138 chr2L 18221595 intron CG42750 - chr2L 18221664 intron CG42750 - chr2L 18221733 intron CG42750 - chr2L_6_18220001 chr2L_18220001 RAL-849 1090 chr2L 18239951 18239990 chr2L 18240084 18240123 14 132 28.5 30.5 29.5 0.5 172 chr2L 18239951 intron CG42750 - chr2L 18240037 intron CG42750 - chr2L 18240123 intron CG42750 - chr2L_14_18240001 chr2L_18240001 RAL-849 1091 chr2L 18243337 18243359 chr2L 18243464 18243486 5 127 21.0 18.5 19.8 0.2 149 chr2L 18243337 intron CG42750 - chr2L 18243412 intron CG42750 - chr2L 18243486 intron CG42750 - chr2L_5_18240001 chr2L_18240001 RAL-849 1092 chr2L 18250520 18250529 chr2L 18250682 18250691 6 162 17.5 3.0 10.2 0.5 171 chr2L 18250520 intron CG42750 - chr2L 18250606 intron CG42750 - chr2L 18250691 intron CG42750 - chr2L_6_18250001 chr2L_18250001 RAL-849 1093 chr2L 18254769 18254835 chr2L 18254919 18254982 15 150 7.5 13.0 10.2 1.3 213 chr2L 18254769 intron CG42750 - chr2L 18254876 intron CG42750 - chr2L 18254982 intron CG42750 - chr2L_15_18250001 chr2L_18250001 RAL-849 1094 chr2L 18273995 18274056 chr2L 18274131 18274192 13 136 14.0 14.5 14.2 0.9 197 chr2L 18273995 intron CG42750 - chr2L 18274094 intron CG42750 - chr2L 18274192 intron CG42750 - chr2L_13_18270001 chr2L_18270001 RAL-849 1095 chr2L 18286373 18286433 chr2L 18286516 18286576 9 143 7.0 6.0 6.5 1.2 203 chr2L 18286373 intergenic not near genes chr2L 18286474 intergenic not near genes chr2L 18286576 intergenic not near genes chr2L_9_18285001 chr2L_18285001 RAL-849 1096 chr2L 18291486 18291510 chr2L 18291634 18291658 7 148 14.5 6.0 10.2 0.6 172 chr2L 18291486 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291572 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291658 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_7_18290001 chr2L_18290001 RAL-849 1097 chr2L 18306729 18306783 chr2L 18307136 18307190 10 407 22.5 18.0 20.2 0.5 461 chr2L 18306729 intergenic not near genes chr2L 18306960 intergenic not near genes chr2L 18307190 intergenic not near genes chr2L_10_18305001 chr2L_18305001 RAL-849 1098 chr2L 18334574 18334639 chr2L 18334709 18334774 13 135 22.0 19.0 20.5 0.6 200 chr2L 18334574 intron Fas3 + chr2L 18334674 intron Fas3 + chr2L 18334774 intron Fas3 + chr2L_13_18330001 chr2L_18330001 RAL-849 1099 chr2L 18344872 18344931 chr2L 18345036 18345095 15 158 13.5 12.0 12.8 1.1 223 chr2L 18344872 intron Fas3 + chr2L 18344984 intron Fas3 + chr2L 18345095 intron Fas3 + chr2L_15_18340001 chr2L_18340001 RAL-849 1100 chr2L 18407994 18408057 chr2L 18412829 18412900 Doc 14 4839 6.5 0.0 3.2 3.3 4906 chr2L 18407994 intergenic not near genes chr2L 18410447 intergenic not near genes chr2L 18412900 intergenic not near genes chr2L_14_18410001 chr2L_18410001 RAL-849 1101 chr2L 18419751 18419782 chr2L 18419888 18419912 4 135 8.5 7.5 8.0 0.4 161 chr2L 18419751 intergenic not near genes chr2L 18419832 intergenic not near genes chr2L 18419912 intergenic not near genes chr2L_4_18415001 chr2L_18415001 RAL-849 1102 chr2L 18440283 18440351 chr2L 18440439 18440507 13 156 10.0 12.0 11.0 1.1 224 chr2L 18440283 intergenic not near genes chr2L 18440395 intergenic not near genes chr2L 18440507 intergenic not near genes chr2L_13_18440001 chr2L_18440001 RAL-849 1103 chr2L 18442307 18442372 chr2L 18442436 18442501 7 129 16.5 18.5 17.5 0.4 194 chr2L 18442307 3` UTR RpS26 - chr2L 18442404 3` UTR RpS26 - chr2L 18442501 3` UTR RpS26 - chr2L_7_18440001 chr2L_18440001 RAL-849 1104 chr2L 18443331 18443362 chr2L 18443457 18443488 7 126 12.0 18.5 15.2 0.4 157 chr2L 18443331 intergenic RpS26 - chr2L 18443410 intergenic RpS26 - chr2L 18443488 intergenic RpS26 - chr2L_7_18440001 chr2L_18440001 RAL-849 1105 chr2L 18449354 18449412 chr2L 18449505 18449563 12 151 11.5 21.0 16.2 0.7 209 chr2L 18449354 intergenic bsf -,ncm - chr2L 18449458 intergenic bsf - chr2L 18449563 3` UTR bsf - chr2L_12_18445001 chr2L_18445001 RAL-849 1106 chr2L 18538554 18538595 chr2L 18538686 18538726 4 132 17.0 17.5 17.2 0.2 172 chr2L 18538554 intron Pde11 - chr2L 18538640 intron Pde11 - chr2L 18538726 intron Pde11 - chr2L_4_18535001 chr2L_18535001 RAL-849 1107 chr2L 18561507 18561580 chr2L 18561658 18561731 16 151 14.5 18.5 16.5 0.9 224 chr2L 18561507 intron Pde11 - chr2L 18561619 intron Pde11 - chr2L 18561731 intron Pde11 - chr2L_16_18560001 chr2L_18560001 RAL-849 1108 chr2L 18568273 18568330 chr2L 18568403 18568460 11 130 22.5 20.5 21.5 0.5 187 chr2L 18568273 intron Pde11 - chr2L 18568366 intron Pde11 - chr2L 18568460 intron Pde11 - chr2L_11_18565001 chr2L_18565001 RAL-849 1109 chr2L 18659884 18659956 chr2L 18660018 18660090 13 132 12.0 14.0 13.0 0.9 206 chr2L 18659884 intron MESR3 + chr2L 18659987 intron MESR3 + chr2L 18660090 intron MESR3 + chr2L_13_18655001 chr2L_18655001 RAL-849 1110 chr2L 18664541 18664575 chr2L 18664667 18664701 7 126 20.0 24.0 22.0 0.3 160 chr2L 18664541 intergenic not near genes chr2L 18664621 intergenic not near genes chr2L 18664701 intergenic not near genes chr2L_7_18660001 chr2L_18660001 RAL-849 1111 chr2L 18678342 18678363 chr2L 18678477 18678498 9 135 23.5 17.0 20.2 0.4 156 chr2L 18678342 intron CG31751 + chr2L 18678420 intron CG31751 + chr2L 18678498 intron CG31751 + chr2L_9_18675001 chr2L_18675001 RAL-849 1112 chr2L 18699164 18699170 chr2L 18699291 18699297 4 126 18.5 12.5 15.5 0.2 133 chr2L 18699164 exon CG10341 + chr2L 18699230 exon CG10341 + chr2L 18699297 exon CG10341 + chr2L_4_18695001 chr2L_18695001 RAL-849 1113 chr2L 18699172 18699233 chr2L 18699289 18699356 21 124 11.0 12.5 11.8 1.6 184 chr2L 18699172 exon CG10341 + chr2L 18699264 exon CG10341 + chr2L 18699356 exon CG10341 + chr2L_21_18695001 chr2L_18695001 RAL-849 1114 chr2L 18730750 18730777 chr2L 18730877 18730904 8 127 8.5 11.0 9.8 0.7 154 chr2L 18730750 intron CG10348 - chr2L 18730827 intron CG10348 - chr2L 18730904 5` UTR CG10348 - chr2L_8_18730001 chr2L_18730001 RAL-849 1115 chr2L 18811365 18811428 chr2L 18811514 18811560 12 139 5.0 3.5 4.2 2.3 195 chr2L 18811365 intergenic CG10570 -,CG42502 - chr2L 18811462 intergenic CG10570 -,CG42502 - chr2L 18811560 intergenic not near genes chr2L_12_18810001 chr2L_18810001 RAL-849 1116 chr2L 18812533 18812577 chr2L 18812846 18812890 8 313 13.5 23.5 18.5 0.4 357 chr2L 18812533 intergenic CG17325 +,CG42305 + chr2L 18812712 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812890 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_8_18810001 chr2L_18810001 RAL-849 1117 chr2L 18819498 18819561 chr2L 18819627 18819689 10 128 6.0 13.0 9.5 1.0 191 chr2L 18819498 intron CG17324 + chr2L 18819594 intron CG17324 + chr2L 18819689 intron CG17324 + chr2L_10_18815001 chr2L_18815001 RAL-849 1118 chr2L 18883813 18883874 chr2L 18883945 18884006 20 131 9.0 5.5 7.2 2.4 193 chr2L 18883813 intergenic not near genes chr2L 18883910 intergenic not near genes chr2L 18884006 intergenic not near genes chr2L_20_18880001 chr2L_18880001 RAL-849 1119 chr2L 18898358 18898400 chr2L 18898480 18898516 20 128 7.5 1.0 4.2 3.8 158 chr2L 18898358 intergenic not near genes chr2L 18898437 intergenic not near genes chr2L 18898516 intergenic not near genes chr2L_20_18895001 chr2L_18895001 RAL-849 1120 chr2L 18902578 18902650 chr2L 18902909 18902981 20 331 4.5 4.0 4.2 3.8 403 chr2L 18902578 intergenic not near genes chr2L 18902780 intergenic not near genes chr2L 18902981 intergenic not near genes chr2L_20_18900001 chr2L_18900001 RAL-849 1121 chr2L 18981724 18981769 chr2L 18981835 18981896 14 125 20.5 21.0 20.8 0.6 172 chr2L 18981724 intron Swip-1 - chr2L 18981810 intron Swip-1 - chr2L 18981896 intron Swip-1 - chr2L_14_18980001 chr2L_18980001 RAL-849 1122 chr2L 19016206 19016266 chr2L 19016339 19016412 7 143 18.0 14.0 16.0 0.4 206 chr2L 19016206 intergenic not near genes chr2L 19016309 intergenic not near genes chr2L 19016412 intergenic not near genes chr2L_7_19015001 chr2L_19015001 RAL-849 1123 chr2L 19024096 19024097 chr2L 21768291 21768293 5 2744195 33.5 30.0 31.8 0.2 2744197 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768293 intron CG31612 - chr2L_5_20395001 chr2L_20395001 RAL-849 1124 chr2L 19035879 19035942 chr2L 19036019 19036082 11 138 20.5 20.0 20.2 0.5 203 chr2L 19035879 intron mib2 + chr2L 19035980 intron mib2 + chr2L 19036082 intron mib2 + chr2L_11_19035001 chr2L_19035001 RAL-849 1125 chr2L 19070235 19070296 chr2L 19070371 19070422 19 131 24.0 22.0 23.0 0.8 187 chr2L 19070235 intergenic CG10702 - chr2L 19070328 intergenic CG10702 - chr2L 19070422 intergenic not near genes chr2L_19_19070001 chr2L_19070001 RAL-849 1126 chr2L 19121533 19121558 chr2L 19121646 19121679 7 125 18.0 19.5 18.8 0.4 146 chr2L 19121533 3` UTR l(2)37Cc - chr2L 19121606 3` UTR l(2)37Cc - chr2L 19121679 3` UTR l(2)37Cc - chr2L_7_19120001 chr2L_19120001 RAL-849 1127 chr2L 19144710 19144763 chr2L 19144850 19144903 13 140 14.0 10.5 12.2 1.0 193 chr2L 19144710 intron brat + chr2L 19144806 intron brat + chr2L 19144903 intron brat + chr2L_13_19140001 chr2L_19140001 RAL-849 1128 chr2L 19147330 19147389 chr2L 19154415 19154474 297 17 7085 9.0 7.0 8.0 1.9 7144 chr2L 19147330 intron brat + chr2L 19150902 intron brat + chr2L 19154474 intron brat + chr2L_17_19150001 chr2L_19150001 RAL-849 1129 chr2L 19156627 19156646 chr2L 19156770 19156789 5 143 25.5 18.5 22.0 0.2 162 chr2L 19156627 intron brat + chr2L 19156708 intron brat + chr2L 19156789 intron brat + chr2L_5_19155001 chr2L_19155001 RAL-849 1130 chr2L 19183294 19183370 chr2L 19183424 19183500 18 130 23.5 23.5 23.5 0.7 206 chr2L 19183294 3` UTR CR17567 - chr2L 19183397 3` UTR CR17567 - chr2L 19183500 intron CR17567 - chr2L_18_19180001 chr2L_19180001 RAL-849 1131 chr2L 19237273 19237334 chr2L 19237405 19237467 14 145 19.5 16.0 17.8 0.7 194 chr2L 19237273 intergenic not near genes chr2L 19237370 intergenic not near genes chr2L 19237467 intergenic not near genes chr2L_14_19235001 chr2L_19235001 RAL-849 1132 chr2L 19246087 19246103 chr2L 19246195 19246231 4 116 19.0 25.0 22.0 0.2 144 chr2L 19246087 intergenic not near genes chr2L 19246159 intergenic not near genes chr2L 19246231 intergenic not near genes chr2L_4_19245001 chr2L_19245001 RAL-849 1133 chr2L 19246106 19246139 chr2L 19246193 19246265 5 112 23.5 25.0 24.2 0.2 159 chr2L 19246106 intergenic not near genes chr2L 19246186 intergenic not near genes chr2L 19246265 intergenic not near genes chr2L_5_19245001 chr2L_19245001 RAL-849 1134 chr2L 19327086 19327150 chr2L 19327212 19327276 15 120 21.5 20.5 21.0 0.7 190 chr2L 19327086 intergenic CR45258 + chr2L 19327181 intergenic CR45258 + chr2L 19327276 intergenic CR45258 + chr2L_15_19325001 chr2L_19325001 RAL-849 1135 chr2L 19331636 19331681 chr2L 19331760 19331810 9 121 20.5 17.0 18.8 0.5 174 chr2L 19331636 intergenic not near genes chr2L 19331723 intergenic not near genes chr2L 19331810 intergenic not near genes chr2L_9_19330001 chr2L_19330001 RAL-849 1136 chr2L 19344991 19345035 chr2L 19357234 19357284 blood 11 12255 9.0 8.0 8.5 1.2 12293 chr2L 19344991 intron dnt - chr2L 19351138 intron dnt - chr2L 19357284 intron dnt - chr2L_11_19350001 chr2L_19350001 RAL-849 1137 chr2L 19357497 19357568 chr2L 19357637 19357708 35 139 6.0 9.5 7.8 4.0 211 chr2L 19357497 intron dnt - chr2L 19357602 intron dnt - chr2L 19357708 intron dnt - chr2L_35_19355001 chr2L_19355001 RAL-849 1138 chr2L 19359144 19359206 chr2L 19359275 19359349 18 142 18.5 21.0 19.8 0.9 205 chr2L 19359144 intron dnt - chr2L 19359246 intron dnt - chr2L 19359349 intron dnt - chr2L_18_19355001 chr2L_19355001 RAL-849 1139 chr2L 19374441 19374514 chr2L 19374600 19374673 10 156 19.0 15.5 17.2 0.5 232 chr2L 19374441 intergenic not near genes chr2L 19374557 intergenic not near genes chr2L 19374673 intergenic not near genes chr2L_10_19370001 chr2L_19370001 RAL-849 1140 chr2L 19378299 19378346 chr2L 19378432 19378485 7 136 22.5 24.5 23.5 0.3 186 chr2L 19378299 intergenic not near genes chr2L 19378392 intergenic not near genes chr2L 19378485 intergenic not near genes chr2L_7_19375001 chr2L_19375001 RAL-849 1141 chr2L 19380467 19380529 chr2L 19380586 19380659 19 126 7.0 4.5 5.8 2.8 192 chr2L 19380467 intergenic CG17350 + chr2L 19380563 intergenic CG17350 + chr2L 19380659 intergenic CG17350 + chr2L_19_19380001 chr2L_19380001 RAL-849 1142 chr2L 19405576 19405637 chr2L 19405716 19405777 7 140 1.5 2.0 1.8 2.5 201 chr2L 19405576 intron Pax - chr2L 19405676 intron Pax - chr2L 19405777 intron Pax - chr2L_7_19405001 chr2L_19405001 RAL-849 1143 chr2L 19437473 19437528 chr2L 19437615 19437670 14 141 11.5 10.5 11.0 1.2 197 chr2L 19437473 intron CG10237 - chr2L 19437572 intron CG10237 - chr2L 19437670 exon CG10237 - chr2L_14_19435001 chr2L_19435001 RAL-849 1144 chr2L 19441021 19441081 chr2L 19441148 19441208 21 125 8.5 6.5 7.5 2.5 187 chr2L 19441021 intron CG10237 - chr2L 19441114 intron CG10237 - chr2L 19441208 5` UTR CG10237 - chr2L_21_19440001 chr2L_19440001 RAL-849 1145 chr2L 19544573 19544612 chr2L 19544675 19544728 7 110 26.5 26.0 26.2 0.3 155 chr2L 19544573 exon ref(2)P + chr2L 19544650 exon ref(2)P + chr2L 19544728 exon ref(2)P + chr2L_7_19540001 chr2L_19540001 RAL-849 1146 chr2L 19560798 19560865 chr2L 19560928 19561009 18 135 17.5 14.0 15.8 1.1 211 chr2L 19560798 exon Tep5 + chr2L 19560904 exon Tep5 + chr2L 19561009 exon Tep5 + chr2L_18_19560001 chr2L_19560001 RAL-849 1147 chr2L 19562477 19562559 chr2L 19562608 19562689 10 129 26.0 32.0 29.0 0.3 212 chr2L 19562477 exon Tep5 + chr2L 19562583 intron Tep5 + chr2L 19562689 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-849 1148 chr2L 19608560 19608610 chr2L 19608701 19608750 9 136 17.5 20.0 18.8 0.5 190 chr2L 19608560 intron Lar + chr2L 19608655 intron Lar + chr2L 19608750 intron Lar + chr2L_9_19605001 chr2L_19605001 RAL-849 1149 chr2L 19620058 19620126 chr2L 19621095 19621139 jockey 16 1034 11.5 10.0 10.8 1.4 1081 chr2L 19620058 intron Lar + chr2L 19620598 intron Lar + chr2L 19621139 intron Lar + chr2L_16_19620001 chr2L_19620001 RAL-849 1150 chr2L 19652530 19652591 chr2L 19674016 19674077 opus 28 21485 10.0 7.5 8.8 2.9 21547 chr2L 19652530 intron Lar + chr2L 19663304 intron Lar + chr2L 19674077 intron Lar + chr2L_28_19660001 chr2L_19660001 RAL-849 1151 chr2L 19683982 19684052 chr2L 19684118 19684172 12 132 23.5 20.0 21.8 0.5 190 chr2L 19683982 intron Lar + chr2L 19684077 intron Lar + chr2L 19684172 intron Lar + chr2L_12_19680001 chr2L_19680001 RAL-849 1152 chr2L 19690275 19690343 chr2L 19690403 19690442 10 116 19.5 19.5 19.5 0.5 167 chr2L 19690275 intron Lar + chr2L 19690358 intron Lar + chr2L 19690442 intron Lar + chr2L_10_19690001 chr2L_19690001 RAL-849 1153 chr2L 19703498 19703562 chr2L 19712684 19712748 roo 32 9184 7.5 8.0 7.8 3.6 9250 chr2L 19703498 intron Lar + chr2L 19708123 intron Lar + chr2L 19712748 intron Lar + chr2L_32_19705001 chr2L_19705001 RAL-849 1154 chr2L 19718482 19718510 chr2L 19718620 19718648 4 138 10.5 16.5 13.5 0.3 166 chr2L 19718482 intron Lar + chr2L 19718565 intron Lar + chr2L 19718648 intron Lar + chr2L_4_19715001 chr2L_19715001 RAL-849 1155 chr2L 19737307 19737381 chr2L 19740826 19740885 1360 15 3514 9.0 6.0 7.5 1.8 3578 chr2L 19737307 intergenic Nf-YB + chr2L 19739096 intergenic not near genes chr2L 19740885 intergenic not near genes chr2L_15_19735001 chr2L_19735001 RAL-849 1156 chr2L 19762779 19762830 chr2L 19763051 19763122 pogo 16 288 10.0 5.5 7.8 1.8 343 chr2L 19762779 exon fbp - chr2L 19762950 intron fbp - chr2L 19763122 intron fbp - chr2L_16_19760001 chr2L_19760001 RAL-849 1157 chr2L 19773131 19773193 chr2L 19773268 19773330 7 137 17.5 19.5 18.5 0.4 199 chr2L 19773131 intergenic not near genes chr2L 19773230 intergenic not near genes chr2L 19773330 intergenic not near genes chr2L_7_19770001 chr2L_19770001 RAL-849 1158 chr2L 19776621 19776639 chr2L 19776751 19776769 4 130 30.0 28.0 29.0 0.1 148 chr2L 19776621 3` UTR CdGAPr - chr2L 19776695 3` UTR CdGAPr - chr2L 19776769 3` UTR CdGAPr - chr2L_4_19775001 chr2L_19775001 RAL-849 1159 chr2L 19823240 19823296 chr2L 19823379 19823435 11 139 22.5 16.0 19.2 0.5 195 chr2L 19823240 intron sick + chr2L 19823338 intron sick + chr2L 19823435 intron sick + chr2L_11_19820001 chr2L_19820001 RAL-849 1160 chr2L 19824369 19824415 chr2L 19824502 19824548 10 131 15.0 18.0 16.5 0.6 179 chr2L 19824369 intron sick + chr2L 19824458 intron sick + chr2L 19824548 intron sick + chr2L_10_19820001 chr2L_19820001 RAL-849 1161 chr2L 19837235 19837304 chr2L 19837365 19837433 10 128 8.5 5.5 7.0 1.2 198 chr2L 19837235 intron sick + chr2L 19837334 intron sick + chr2L 19837433 intron sick + chr2L_10_19835001 chr2L_19835001 RAL-849 1162 chr2L 19846237 19846265 chr2L 19846368 19846396 5 131 8.0 22.5 15.2 0.3 159 chr2L 19846237 intron sick + chr2L 19846316 intron sick + chr2L 19846396 intron sick + chr2L_5_19845001 chr2L_19845001 RAL-849 1163 chr2L 19859250 19859316 chr2L 19859623 19859689 9 373 13.5 13.0 13.2 0.6 439 chr2L 19859250 intron sick + chr2L 19859470 intron sick + chr2L 19859689 intron sick + chr2L_9_19855001 chr2L_19855001 RAL-849 1164 chr2L 19871551 19871558 chr2L 19871678 19871695 4 134 14.5 21.5 18.0 0.2 144 chr2L 19871551 intron sick + chr2L 19871623 intron sick + chr2L 19871695 intron sick + chr2L_4_19870001 chr2L_19870001 RAL-849 1165 chr2L 19901445 19901510 chr2L 19901598 19901663 12 153 28.0 28.5 28.2 0.4 218 chr2L 19901445 intron sick + chr2L 19901554 intron sick + chr2L 19901663 intron sick + chr2L_12_19900001 chr2L_19900001 RAL-849 1166 chr2L 19911246 19911255 chr2L 19911384 19911393 4 138 26.5 21.5 24.0 0.2 147 chr2L 19911246 intron,3` UTR sick +,CR43097 - chr2L 19911320 intron,3` UTR sick +,CR43097 - chr2L 19911393 intron,3` UTR sick +,CR43097 - chr2L_4_19910001 chr2L_19910001 RAL-849 1167 chr2L 19911257 19911314 chr2L 19911377 19911445 18 133 21.5 21.0 21.2 0.8 188 chr2L 19911257 intron,3` UTR sick +,CR43097 - chr2L 19911351 intron,3` UTR sick +,CR43097 - chr2L 19911445 intron,3` UTR sick +,CR43097 - chr2L_18_19910001 chr2L_19910001 RAL-849 1168 chr2L 19912563 19912575 chr2L 19912710 19912721 4 146 17.0 8.0 12.5 0.3 158 chr2L 19912563 intron sick + chr2L 19912642 intron sick + chr2L 19912721 intron sick + chr2L_4_19910001 chr2L_19910001 RAL-849 1169 chr2L 19935202 19935253 chr2L 19935329 19935380 9 125 18.0 16.0 17.0 0.5 178 chr2L 19935202 intron sick + chr2L 19935291 intron sick + chr2L 19935380 intron sick + chr2L_9_19935001 chr2L_19935001 RAL-849 1170 chr2L 19947679 19947735 chr2L 19947815 19947871 13 136 13.0 22.0 17.5 0.7 192 chr2L 19947679 intron sick + chr2L 19947775 intron sick + chr2L 19947871 intron sick + chr2L_13_19945001 chr2L_19945001 RAL-849 1171 chr2L 19950160 19950198 chr2L 19950292 19950330 8 130 19.5 15.0 17.2 0.4 170 chr2L 19950160 intron sick + chr2L 19950245 intron sick + chr2L 19950330 intron sick + chr2L_8_19950001 chr2L_19950001 RAL-849 1172 chr2L 19994609 19994675 chr2L 19994739 19994805 9 123 13.5 12.0 12.8 0.7 196 chr2L 19994609 intron CG43861 - chr2L 19994707 intron CG43861 - chr2L 19994805 intron CG43861 - chr2L_9_19990001 chr2L_19990001 RAL-849 1173 chr2L 20005829 20005887 chr2L 20010955 20011013 flea 18 5126 6.5 11.5 9.0 1.8 5184 chr2L 20005829 intron CG43861 - chr2L 20008421 intron CG43861 - chr2L 20011013 intron CG43861 - chr2L_18_20005001 chr2L_20005001 RAL-849 1174 chr2L 20011679 20011744 chr2L 20011812 20011877 5 133 13.5 11.5 12.5 0.4 198 chr2L 20011679 intron CG43861 - chr2L 20011778 intron CG43861 - chr2L 20011877 intron CG43861 - chr2L_5_20010001 chr2L_20010001 RAL-849 1175 chr2L 20022039 20022096 chr2L 20022202 20022259 24 162 13.0 7.0 10.0 2.2 220 chr2L 20022039 intergenic not near genes chr2L 20022149 intergenic not near genes chr2L 20022259 intergenic not near genes chr2L_24_20020001 chr2L_20020001 RAL-849 1176 chr2L 20069480 20069506 chr2L 20069609 20069636 4 129 32.0 25.5 28.8 0.1 156 chr2L 20069480 exon bwa + chr2L 20069558 intron bwa + chr2L 20069636 intron bwa + chr2L_4_20065001 chr2L_20065001 RAL-849 1177 chr2L 20069511 20069550 chr2L 20069606 20069680 11 124 27.0 25.0 26.0 0.4 169 chr2L 20069511 exon bwa + chr2L 20069596 intron bwa + chr2L 20069680 intron bwa + chr2L_11_20065001 chr2L_20065001 RAL-849 1178 chr2L 20077608 20077668 chr2L 20085912 20085972 15 8306 53.0 35.5 44.2 0.3 8364 chr2L 20077608 intron neb + chr2L 20081790 intron,intron neb +,fok - chr2L 20085972 intron neb + chr2L_15_20080001 chr2L_20080001 RAL-849 1179 chr2L 20122587 20122638 chr2L 20122727 20122779 5 140 14.0 13.0 13.5 0.3 192 chr2L 20122587 intergenic not near genes chr2L 20122683 intergenic not near genes chr2L 20122779 intergenic not near genes chr2L_5_20120001 chr2L_20120001 RAL-849 1180 chr2L 20124309 20124357 chr2L 20124437 20124485 12 128 18.5 23.5 21.0 0.5 176 chr2L 20124309 intergenic not near genes chr2L 20124397 intergenic not near genes chr2L 20124485 intergenic not near genes chr2L_12_20120001 chr2L_20120001 RAL-849 1181 chr2L 20232901 20232964 chr2L 20233028 20233094 15 132 25.0 22.0 23.5 0.6 193 chr2L 20232901 intergenic not near genes chr2L 20232998 intergenic not near genes chr2L 20233094 intergenic not near genes chr2L_15_20230001 chr2L_20230001 RAL-849 1182 chr2L 20272080 20272132 chr2L 20282841 20282893 copia 14 10760 22.5 23.5 23.0 0.6 10813 chr2L 20272080 intergenic not near genes chr2L 20277486 intergenic not near genes chr2L 20282893 intergenic not near genes chr2L_14_20275001 chr2L_20275001 RAL-849 1183 chr2L 20294252 20294321 chr2L 20294391 20294460 11 139 18.0 20.5 19.2 0.5 208 chr2L 20294252 intergenic CG12617 + chr2L 20294356 intergenic CG12617 + chr2L 20294460 intergenic CG12617 + chr2L_11_20290001 chr2L_20290001 RAL-849 1184 chr2L 20296497 20296529 chr2L 20296628 20296660 6 131 10.0 19.0 14.5 0.4 163 chr2L 20296497 intergenic CR43414 - chr2L 20296578 intergenic CR43414 - chr2L 20296660 3` UTR CR43414 - chr2L_6_20295001 chr2L_20295001 RAL-849 1185 chr2L 20303130 20303142 chr2L 20310648 20310660 blood 4 7518 10.0 9.0 9.5 0.4 7530 chr2L 20303130 intergenic not near genes chr2L 20306895 intergenic not near genes chr2L 20310660 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-849 1186 chr2L 20303157 20303181 chr2L 20310640 20310699 blood 11 7515 5.0 8.0 6.5 1.5 7542 chr2L 20303157 intergenic not near genes chr2L 20306928 intergenic not near genes chr2L 20310699 intergenic not near genes chr2L_11_20305001 chr2L_20305001 RAL-849 1187 chr2L 20310829 20310888 chr2L 20310958 20311017 9 129 16.0 15.5 15.8 0.5 188 chr2L 20310829 intergenic spir + chr2L 20310923 intergenic spir + chr2L 20311017 intergenic spir + chr2L_9_20310001 chr2L_20310001 RAL-849 1188 chr2L 20372170 20372230 chr2L 20372470 20372521 pogo 26 297 8.5 8.5 8.5 2.7 351 chr2L 20372170 intergenic Ugt37a1 - chr2L 20372346 intergenic Ugt37a1 - chr2L 20372521 exon Ugt37a1 - chr2L_26_20370001 chr2L_20370001 RAL-849 1189 chr2L 20395431 20395502 chr2L 20395560 20395631 13 126 21.0 18.5 19.8 0.6 200 chr2L 20395431 intron CG10947 - chr2L 20395531 intron CG10947 - chr2L 20395631 intron CG10947 - chr2L_13_20395001 chr2L_20395001 RAL-849 1190 chr2L 20399731 20399757 chr2L 20400022 20400048 5 291 24.0 17.0 20.5 0.2 317 chr2L 20399731 intron CG10947 - chr2L 20399890 intron CG10947 - chr2L 20400048 intron CG10947 - chr2L_5_20395001 chr2L_20395001 RAL-849 1191 chr2L 20424015 20424072 chr2L 20424150 20424165 11 131 19.0 21.5 20.2 0.5 150 chr2L 20424015 intron CG15130 - chr2L 20424090 intron CG15130 - chr2L 20424165 intron CG15130 - chr2L_11_20420001 chr2L_20420001 RAL-849 1192 chr2L 20468340 20468372 chr2L 20468495 20468519 INE-1 9 153 14.5 16.0 15.2 0.6 179 chr2L 20468340 intron CR44980 - chr2L 20468430 intron CR44980 - chr2L 20468519 intron CR44980 - chr2L_9_20465001 chr2L_20465001 RAL-849 1193 chr2L 20468380 20468395 chr2L 20468491 20468550 INE-1 5 146 14.0 16.0 15.0 0.3 170 chr2L 20468380 intron CR44980 - chr2L 20468465 intron CR44980 - chr2L 20468550 intron CR44980 - chr2L_5_20465001 chr2L_20465001 RAL-849 1194 chr2L 20494735 20494794 chr2L 20494946 20495005 8 211 6.0 13.0 9.5 0.8 270 chr2L 20494735 intergenic CG34007 + chr2L 20494870 intergenic CG34007 + chr2L 20495005 intergenic CG34007 + chr2L_8_20490001 chr2L_20490001 RAL-849 1195 chr2L 20498641 20498702 chr2L 20498790 20498851 22 149 9.0 12.0 10.5 1.9 210 chr2L 20498641 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498851 intergenic not near genes chr2L_22_20495001 chr2L_20495001 RAL-849 1196 chr2L 20524135 20524146 chr2L 20524269 20524280 6 134 11.5 0.0 5.8 0.9 145 chr2L 20524135 intergenic not near genes chr2L 20524208 intergenic not near genes chr2L 20524280 intergenic not near genes chr2L_6_20520001 chr2L_20520001 RAL-849 1197 chr2L 20549084 20549142 chr2L 20549216 20549274 7 132 15.0 22.5 18.8 0.4 190 chr2L 20549084 intergenic not near genes chr2L 20549179 intergenic not near genes chr2L 20549274 intergenic not near genes chr2L_7_20545001 chr2L_20545001 RAL-849 1198 chr2L 20550586 20550617 chr2L 20550718 20550751 10 133 13.5 6.5 10.0 0.9 165 chr2L 20550586 intergenic not near genes chr2L 20550668 intergenic not near genes chr2L 20550751 intergenic not near genes chr2L_10_20550001 chr2L_20550001 RAL-849 1199 chr2L 20553143 20553207 chr2L 20553269 20553303 14 124 7.5 7.0 7.2 1.7 160 chr2L 20553143 intergenic not near genes chr2L 20553223 intergenic not near genes chr2L 20553303 intergenic not near genes chr2L_14_20550001 chr2L_20550001 RAL-849 1200 chr2L 20563505 20563555 chr2L 20563632 20563676 4 126 16.0 15.5 15.8 0.2 171 chr2L 20563505 intron CR45347 + chr2L 20563590 intron CR45347 + chr2L 20563676 intron CR45347 + chr2L_4_20560001 chr2L_20560001 RAL-849 1201 chr2L 20568619 20568680 chr2L 20569054 20569120 X-element 30 439 8.0 5.0 6.5 4.0 501 chr2L 20568619 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569120 intron CR45347 + chr2L_30_20565001 chr2L_20565001 RAL-849 1202 chr2L 20576178 20576240 chr2L 20583697 20583759 blood 18 7519 8.0 10.5 9.2 1.8 7581 chr2L 20576178 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583759 3` UTR CR44909 - chr2L_18_20575001 chr2L_20575001 RAL-849 1203 chr2L 20595644 20595675 chr2L 20595893 20595919 8 243 20.0 11.0 15.5 0.5 275 chr2L 20595644 intron CR44909 - chr2L 20595782 intron CR44909 - chr2L 20595919 intron CR44909 - chr2L_8_20595001 chr2L_20595001 RAL-849 1204 chr2L 20595681 20595693 chr2L 20595887 20595915 4 232 16.5 11.5 14.0 0.3 234 chr2L 20595681 intron CR44909 - chr2L 20595798 intron CR44909 - chr2L 20595915 intron CR44909 - chr2L_4_20595001 chr2L_20595001 RAL-849 1205 chr2L 20597041 20597112 chr2L 20597167 20597239 11 120 25.0 22.0 23.5 0.4 198 chr2L 20597041 intron CR44909 - chr2L 20597140 intron CR44909 - chr2L 20597239 intron CR44909 - chr2L_11_20595001 chr2L_20595001 RAL-849 1206 chr2L 20601756 20601799 chr2L 20601884 20601927 5 128 18.0 12.0 15.0 0.3 171 chr2L 20601756 intron CR44909 - chr2L 20601842 intron CR44909 - chr2L 20601927 intron CR44909 - chr2L_5_20600001 chr2L_20600001 RAL-849 1207 chr2L 20602669 20602726 chr2L 20602807 20602864 10 138 0.0 7.0 3.5 2.2 195 chr2L 20602669 intron CR44909 - chr2L 20602766 intron CR44909 - chr2L 20602864 intron CR44909 - chr2L_10_20600001 chr2L_20600001 RAL-849 1208 chr2L 20607595 20607642 chr2L 20607722 20607771 8 121 22.5 22.0 22.2 0.3 176 chr2L 20607595 intron,3` UTR CR44909 -,CR43608 - chr2L 20607683 intron,3` UTR CR44909 -,CR43608 - chr2L 20607771 intron,3` UTR CR44909 -,CR43608 - chr2L_8_20605001 chr2L_20605001 RAL-849 1209 chr2L 20639458 20639524 chr2L 20639784 20639850 INE-1 9 326 23.0 24.0 23.5 0.4 392 chr2L 20639458 intergenic not near genes chr2L 20639654 intergenic CG31680 + chr2L 20639850 intergenic CG31680 + chr2L_9_20635001 chr2L_20635001 RAL-849 1210 chr2L 20674816 20674860 chr2L 20674944 20674988 17 128 3.5 5.5 4.5 3.1 172 chr2L 20674816 intron CG31678 - chr2L 20674902 intron CG31678 - chr2L 20674988 intron CG31678 - chr2L_17_20670001 chr2L_20670001 RAL-849 1211 chr2L 20695762 20695816 chr2L 20695883 20695954 4 134 21.0 20.0 20.5 0.2 192 chr2L 20695762 intron Hr38 - chr2L 20695858 intron Hr38 - chr2L 20695954 intron Hr38 - chr2L_4_20695001 chr2L_20695001 RAL-849 1212 chr2L 20726466 20726532 chr2L 20726594 20726659 25 128 23.0 24.0 23.5 1.0 193 chr2L 20726466 5` UTR CG9316 - chr2L 20726562 intergenic CG9316 - chr2L 20726659 intergenic CG9316 -,CG9317 - chr2L_25_20725001 chr2L_20725001 RAL-849 1213 chr2L 20817794 20817857 chr2L 20817923 20817954 13 124 18.0 21.5 19.8 0.6 160 chr2L 20817794 intergenic CheB38a - chr2L 20817874 exon CheB38a - chr2L 20817954 exon CheB38a - chr2L_13_20815001 chr2L_20815001 RAL-849 1214 chr2L 20821454 20821514 chr2L 20821652 20821712 12 198 21.0 17.0 19.0 0.6 258 chr2L 20821454 intergenic not near genes chr2L 20821583 intergenic not near genes chr2L 20821712 intergenic not near genes chr2L_12_20820001 chr2L_20820001 RAL-849 1215 chr2L 20826477 20826536 chr2L 20826608 20826666 10 128 18.5 22.5 20.5 0.5 189 chr2L 20826477 intron CG9331 + chr2L 20826572 intron CG9331 + chr2L 20826666 exon CG9331 + chr2L_10_20825001 chr2L_20825001 RAL-849 1216 chr2L 20835786 20835834 chr2L 20836553 20836601 Quasimodo 10 767 8.5 13.0 10.8 0.8 815 chr2L 20835786 5` UTR Oseg5 - chr2L 20836194 intergenic Oseg5 -,Spn38F - chr2L 20836601 intergenic Spn38F - chr2L_10_20835001 chr2L_20835001 RAL-849 1217 chr2L 20839996 20840054 chr2L 20840257 20840316 8 262 26.0 11.5 18.8 0.4 320 chr2L 20839996 intergenic not near genes chr2L 20840156 intergenic not near genes chr2L 20840316 intergenic CG31676 + chr2L_8_20840001 chr2L_20840001 RAL-849 1218 chr2L 20846719 20846785 chr2L 20846853 20846919 14 134 26.5 25.5 26.0 0.5 200 chr2L 20846719 intron CG31676 + chr2L 20846819 intron CG31676 + chr2L 20846919 intron CG31676 + chr2L_14_20845001 chr2L_20845001 RAL-849 1219 chr2L 20862581 20862588 chr2L 20862728 20862735 4 147 11.5 23.5 17.5 0.2 154 chr2L 20862581 intergenic not near genes chr2L 20862658 intergenic not near genes chr2L 20862735 intergenic not near genes chr2L_4_20860001 chr2L_20860001 RAL-849 1220 chr2L 20865582 20865619 chr2L 20865831 20865859 13 247 29.0 16.0 22.5 0.6 277 chr2L 20865582 exon CG9338 + chr2L 20865720 intron CG9338 + chr2L 20865859 intron CG9338 + chr2L_13_20865001 chr2L_20865001 RAL-849 1221 chr2L 20865620 20865654 chr2L 20865827 20865902 6 238 25.5 16.0 20.8 0.3 282 chr2L 20865620 intron CG9338 + chr2L 20865761 intron CG9338 + chr2L 20865902 intron CG9338 + chr2L_6_20865001 chr2L_20865001 RAL-849 1222 chr2L 20891485 20891546 chr2L 20896636 20896697 jockey 19 5151 5.0 5.0 5.0 3.2 5212 chr2L 20891485 intron,intron CG43739 -,sky - chr2L 20894091 intron,intron CG43739 -,sky - chr2L 20896697 intron,intron CG43739 -,sky - chr2L_19_20890001 chr2L_20890001 RAL-849 1223 chr2L 20901424 20901480 chr2L 20902632 20902694 1360 9 1213 9.0 7.5 8.2 1.0 1270 chr2L 20901424 intron,intron CG43739 -,sky - chr2L 20902059 intron,intron CG43739 -,sky - chr2L 20902694 intron,intron CG43739 -,sky - chr2L_9_20900001 chr2L_20900001 RAL-849 1224 chr2L 20910990 20911056 chr2L 20911116 20911181 15 123 9.0 12.5 10.8 1.3 191 chr2L 20910990 intron,intron CG43739 -,sky - chr2L 20911086 intron,intron CG43739 -,sky - chr2L 20911181 intron,intron CG43739 -,sky - chr2L_15_20910001 chr2L_20910001 RAL-849 1225 chr2L 20928870 20928911 chr2L 20929460 20929501 9 590 18.0 23.0 20.5 0.4 631 chr2L 20928870 intergenic not near genes chr2L 20929186 intergenic CG9270 - chr2L 20929501 3` UTR CG9270 - chr2L_9_20925001 chr2L_20925001 RAL-849 1226 chr2L 20946897 20946900 chr2L 20947034 20947037 4 137 11.0 9.5 10.2 0.4 140 chr2L 20946897 intergenic CR44606 - chr2L 20946967 intergenic CR44606 - chr2L 20947037 intergenic CR44606 - chr2L_4_20945001 chr2L_20945001 RAL-849 1227 chr2L 20946902 20946959 chr2L 20947033 20947089 25 135 4.5 9.5 7.0 3.1 187 chr2L 20946902 intergenic CR44606 - chr2L 20946996 intergenic CR44606 - chr2L 20947089 intergenic CR44606 - chr2L_25_20945001 chr2L_20945001 RAL-849 1228 chr2L 20951056 20951110 chr2L 20951251 20951305 19 194 16.5 16.5 16.5 1.1 249 chr2L 20951056 intergenic not near genes chr2L 20951180 intergenic not near genes chr2L 20951305 intergenic not near genes chr2L_19_20950001 chr2L_20950001 RAL-849 1229 chr2L 20967032 20967105 chr2L 20967168 20967241 12 136 18.5 18.0 18.2 0.6 209 chr2L 20967032 3` UTR CG42238 - chr2L 20967136 3` UTR CG42238 - chr2L 20967241 3` UTR CG42238 - chr2L_12_20965001 chr2L_20965001 RAL-849 1230 chr2L 20976607 20976665 chr2L 20981472 20981509 X-element 20 4864 5.5 6.0 5.8 2.9 4902 chr2L 20976607 intron CG42238 - chr2L 20979058 intron CG42238 - chr2L 20981509 intron CG42238 - chr2L_20_20975001 chr2L_20975001 RAL-849 1231 chr2L 20990995 20991065 chr2L 20991123 20991141 15 124 22.5 21.0 21.8 0.7 146 chr2L 20990995 intron CG42238 - chr2L 20991068 intron CG42238 - chr2L 20991141 intron CG42238 - chr2L_15_20990001 chr2L_20990001 RAL-849 1232 chr2L 21020235 21020301 chr2L 21023962 21024023 NOF 18 3724 8.0 8.0 8.0 2.0 3788 chr2L 21020235 intron CG42238 - chr2L 21022129 intron CG42238 - chr2L 21024023 intron CG42238 - chr2L_18_21020001 chr2L_21020001 RAL-849 1233 chr2L 21041101 21041157 chr2L 21049410 21049448 Tirant 21 8309 10.0 10.5 10.2 1.9 8347 chr2L 21041101 intron CG42238 - chr2L 21045274 intron CG42238 - chr2L 21049448 intron CG42238 - chr2L_21_21045001 chr2L_21045001 RAL-849 1234 chr2L 21074880 21074944 chr2L 21075021 21075085 14 141 4.5 7.0 5.8 2.1 205 chr2L 21074880 intergenic not near genes chr2L 21074982 intergenic tadr + chr2L 21075085 intergenic tadr + chr2L_14_21070001 chr2L_21070001 RAL-849 1235 chr2L 21086416 21086445 chr2L 21086580 21086610 6 163 23.5 21.5 22.5 0.3 194 chr2L 21086416 5` UTR CG33509 - chr2L 21086513 intergenic CG33509 -,ppk13 - chr2L 21086610 intergenic CG33509 -,ppk13 - chr2L_6_21085001 chr2L_21085001 RAL-849 1236 chr2L 21088871 21088934 chr2L 21089004 21089067 10 133 16.5 16.0 16.2 0.6 196 chr2L 21088871 intergenic ppk13 - chr2L 21088969 intergenic ppk13 -,CG9259 + chr2L 21089067 intergenic CG9259 +,ppk13 - chr2L_10_21085001 chr2L_21085001 RAL-849 1237 chr2L 21110609 21110671 chr2L 21110744 21110806 17 134 14.5 12.5 13.5 1.2 197 chr2L 21110609 intron Nhe2 + chr2L 21110708 intron Nhe2 + chr2L 21110806 intron Nhe2 + chr2L_17_21110001 chr2L_21110001 RAL-849 1238 chr2L 21194727 21194801 chr2L 21194944 21195018 18 217 27.5 28.0 27.8 0.6 291 chr2L 21194727 intron Ret - chr2L 21194872 intron Ret - chr2L 21195018 intron Ret - chr2L_18_21190001 chr2L_21190001 RAL-849 1239 chr2L 21199187 21199245 chr2L 21199313 21199372 15 127 25.5 23.0 24.2 0.6 185 chr2L 21199187 intergenic CG31624 -,Ret - chr2L 21199280 3` UTR CG31624 - chr2L 21199372 3` UTR CG31624 - chr2L_15_21195001 chr2L_21195001 RAL-849 1240 chr2L 21218938 21219004 chr2L 21219262 21219328 12 324 25.0 19.5 22.2 0.5 390 chr2L 21218938 intron Atg18b - chr2L 21219133 intron Atg18b - chr2L 21219328 intron Atg18b - chr2L_12_21215001 chr2L_21215001 RAL-849 1241 chr2L 21246464 21246539 chr2L 21246609 21246684 18 144 24.5 18.5 21.5 0.8 220 chr2L 21246464 intron Hr39 + chr2L 21246574 intron Hr39 + chr2L 21246684 intron Hr39 + chr2L_18_21245001 chr2L_21245001 RAL-849 1242 chr2L 21267007 21267026 chr2L 21267174 21267193 4 167 11.0 9.0 10.0 0.4 186 chr2L 21267007 intron CG8671 + chr2L 21267100 intron CG8671 + chr2L 21267193 intron CG8671 + chr2L_4_21265001 chr2L_21265001 RAL-849 1243 chr2L 21286559 21286626 chr2L 21286688 21286755 15 128 5.0 10.5 7.8 1.7 196 chr2L 21286559 exon Mio - chr2L 21286657 intron Mio - chr2L 21286755 intron Mio - chr2L_15_21285001 chr2L_21285001 RAL-849 1244 chr2L 21307449 21307493 chr2L 21307581 21307625 10 132 10.5 10.5 10.5 0.9 176 chr2L 21307449 intron Mio - chr2L 21307537 intron Mio - chr2L 21307625 intron Mio - chr2L_10_21305001 chr2L_21305001 RAL-849 1245 chr2L 21323378 21323422 chr2L 21323516 21323560 9 138 10.5 7.0 8.8 0.9 182 chr2L 21323378 intergenic not near genes chr2L 21323469 intergenic not near genes chr2L 21323560 intergenic not near genes chr2L_9_21320001 chr2L_21320001 RAL-849 1246 chr2L 21326882 21326943 chr2L 21327009 21327069 14 127 20.5 21.0 20.8 0.6 187 chr2L 21326882 5` UTR CR42696 + chr2L 21326976 5` UTR CR42696 + chr2L 21327069 5` UTR CR42696 + chr2L_14_21325001 chr2L_21325001 RAL-849 1247 chr2L 21333107 21333135 chr2L 21333254 21333282 7 147 19.5 13.5 16.5 0.4 175 chr2L 21333107 intron dimm + chr2L 21333194 intron dimm + chr2L 21333282 intron dimm + chr2L_7_21330001 chr2L_21330001 RAL-849 1248 chr2L 21333589 21333637 chr2L 21333766 21333832 6 192 16.5 10.0 13.2 0.4 243 chr2L 21333589 intron dimm + chr2L 21333710 intron dimm + chr2L 21333832 intron dimm + chr2L_6_21330001 chr2L_21330001 RAL-849 1249 chr2L 21347511 21347535 chr2L 21355033 21355057 blood 8 7520 11.5 2.0 6.8 1.0 7546 chr2L 21347511 intron Tsp39D + chr2L 21351284 intron Tsp39D + chr2L 21355057 intron Tsp39D + chr2L_8_21350001 chr2L_21350001 RAL-849 1250 chr2L 21347540 21347567 chr2L 21355027 21355089 blood 4 7513 7.0 2.0 4.5 0.7 7549 chr2L 21347540 intron Tsp39D + chr2L 21351314 intron Tsp39D + chr2L 21355089 intron Tsp39D + chr2L_4_21350001 chr2L_21350001 RAL-849 1251 chr2L 21355560 21355626 chr2L 21355755 21355821 8 195 14.5 13.0 13.8 0.5 261 chr2L 21355560 exon Tsp39D + chr2L 21355690 intron Tsp39D + chr2L 21355821 intron Tsp39D + chr2L_8_21355001 chr2L_21355001 RAL-849 1252 chr2L 21372082 21372138 chr2L 21372405 21372458 4 322 14.0 12.0 13.0 0.3 376 chr2L 21372082 intron CG8665 + chr2L 21372270 intron CG8665 + chr2L 21372458 intron CG8665 + chr2L_4_21370001 chr2L_21370001 RAL-849 1253 chr2L 21392108 21392118 chr2L 21392249 21392259 5 141 10.5 8.0 9.2 0.5 151 chr2L 21392108 3` UTR nrv3 + chr2L 21392184 3` UTR nrv3 + chr2L 21392259 3` UTR nrv3 + chr2L_5_21390001 chr2L_21390001 RAL-849 1254 chr2L 21596986 21597027 chr2L 21604780 21604821 roo 6 7794 14.5 10.0 12.2 0.5 7835 chr2L 21596986 intergenic not near genes chr2L 21600904 intergenic not near genes chr2L 21604821 intergenic not near genes chr2L_6_21600001 chr2L_21600001 RAL-849 1255 chr2L 21653150 21653210 chr2L 21656504 21656564 invader4 7 3354 19.0 13.5 16.2 0.4 3414 chr2L 21653150 intergenic not near genes chr2L 21654857 intergenic not near genes chr2L 21656564 intergenic not near genes chr2L_7_21650001 chr2L_21650001 RAL-849 1256 chr2L 21748604 21748670 chr2L 21749871 21749937 10 1267 34.0 36.5 35.2 0.3 1333 chr2L 21748604 intron step - chr2L 21749270 intron step - chr2L 21749937 intron step - chr2L_10_21745001 chr2L_21745001 RAL-849 1257 chr2L 21750051 21750099 chr2L 21750421 21750469 7 370 22.0 16.0 19.0 0.3 418 chr2L 21750051 intron step - chr2L 21750260 intron step - chr2L 21750469 intron step - chr2L_7_21750001 chr2L_21750001 RAL-849 1258 chr2L 21754627 21754684 chr2L 21754758 21754815 9 131 13.0 19.0 16.0 0.5 188 chr2L 21754627 intron step - chr2L 21754721 intron step - chr2L 21754815 intron step - chr2L_9_21750001 chr2L_21750001 RAL-849 1259 chr2L 21755449 21755514 chr2L 21755623 21755688 20 174 16.5 15.0 15.8 1.2 239 chr2L 21755449 intron step - chr2L 21755568 intron step - chr2L 21755688 intron step - chr2L_20_21755001 chr2L_21755001 RAL-849 1260 chr2L 21819281 21819352 chr2L 21819419 21819490 17 137 22.0 17.0 19.5 0.8 209 chr2L 21819281 intergenic CR44786 + chr2L 21819386 intergenic CR44786 + chr2L 21819490 5` UTR CR44786 + chr2L_17_21815001 chr2L_21815001 RAL-849 1261 chr2L 21825330 21825358 chr2L 21825559 21825587 INE-1 5 229 8.0 18.0 13.0 0.4 257 chr2L 21825330 intergenic not near genes chr2L 21825458 intergenic not near genes chr2L 21825587 intergenic not near genes chr2L_5_21825001 chr2L_21825001 RAL-849 1262 chr2L 21841790 21841823 chr2L 21841905 21841961 14 136 21.0 23.0 22.0 0.6 171 chr2L 21841790 intergenic not near genes chr2L 21841876 intergenic not near genes chr2L 21841961 intergenic not near genes chr2L_14_21840001 chr2L_21840001 RAL-849 1263 chr2L 21855434 21855506 chr2L 21855570 21855643 10 137 19.5 11.5 15.5 0.6 209 chr2L 21855434 intron CR44917 + chr2L 21855538 intron CR44917 + chr2L 21855643 intron CR44917 + chr2L_10_21855001 chr2L_21855001 RAL-849 1264 chr2L 21933881 21933918 chr2L 21934012 21934044 6 124 9.5 8.0 8.8 0.6 163 chr2L 21933881 intergenic not near genes chr2L 21933962 intergenic not near genes chr2L 21934044 intergenic not near genes chr2L_6_21930001 chr2L_21930001 RAL-849 1265 chr2L 21976154 21976219 chr2L 21976359 21976410 11 209 27.5 21.5 24.5 0.4 256 chr2L 21976154 intergenic not near genes chr2L 21976282 intergenic not near genes chr2L 21976410 intergenic not near genes chr2L_11_21975001 chr2L_21975001 RAL-849 1266 chr2L 21981652 21981705 chr2L 21990867 21990916 roo 16 9214 8.5 12.5 10.5 1.4 9264 chr2L 21981652 exon CG2528 - chr2L 21986284 intron CG2528 - chr2L 21990916 exon CG2528 - chr2L_16_21985001 chr2L_21985001 RAL-849 1267 chr2L 22001623 22001674 chr2L 22001749 22001800 12 126 9.5 14.0 11.8 0.9 177 chr2L 22001623 intergenic not near genes chr2L 22001712 intergenic not near genes chr2L 22001800 intergenic not near genes chr2L_12_22000001 chr2L_22000001 RAL-849 1268 chr2L 22047206 22047252 chr2L 22047381 22047427 17 174 8.0 5.0 6.5 2.3 221 chr2L 22047206 intergenic not near genes chr2L 22047316 intergenic not near genes chr2L 22047427 intergenic not near genes chr2L_17_22045001 chr2L_22045001 RAL-849 1269 chr2L 22049739 22049775 chr2L 22049913 22049950 12 175 14.0 14.0 14.0 0.8 211 chr2L 22049739 intergenic not near genes chr2L 22049844 intergenic not near genes chr2L 22049950 intergenic not near genes chr2L_12_22045001 chr2L_22045001 RAL-849 1270 chr2L 22058463 22058530 chr2L 22058609 22058676 14 146 18.5 19.0 18.8 0.7 213 chr2L 22058463 intergenic not near genes chr2L 22058570 intergenic not near genes chr2L 22058676 intergenic not near genes chr2L_14_22055001 chr2L_22055001 RAL-849 1271 chr2L 22058714 22058785 chr2L 22059573 22059644 13 859 14.0 8.0 11.0 1.1 930 chr2L 22058714 intergenic not near genes chr2L 22059179 intergenic not near genes chr2L 22059644 intergenic not near genes chr2L_13_22055001 chr2L_22055001 RAL-849 1272 chr2L 22077252 22077314 chr2L 22077383 22077445 10 131 14.5 14.0 14.2 0.7 193 chr2L 22077252 intergenic not near genes chr2L 22077348 intergenic not near genes chr2L 22077445 intergenic not near genes chr2L_10_22075001 chr2L_22075001 RAL-849 1273 chr2L 22107336 22107348 chr2L 22107513 22107525 4 177 16.5 13.0 14.8 0.3 189 chr2L 22107336 intergenic CG10834 - chr2L 22107430 intergenic CG10834 - chr2L 22107525 intergenic CG10834 - chr2L_4_22105001 chr2L_22105001 RAL-849 1274 chr2L 22141275 22141287 chr2L 22141456 22141468 7 181 5.0 23.5 14.2 0.5 193 chr2L 22141275 intron CG42748 + chr2L 22141372 intron CG42748 + chr2L 22141468 intron CG42748 + chr2L_7_22140001 chr2L_22140001 RAL-849 1275 chr2L 22178026 22178067 chr2L 22178161 22178165 17 131 36.0 42.0 39.0 0.4 139 chr2L 22178026 intron CG3635 + chr2L 22178096 intron CG3635 + chr2L 22178165 intron CG3635 + chr2L_17_22175001 chr2L_22175001 RAL-849 1276 chr2L 22191921 22191930 chr2L 22192050 22192052 4 127 27.5 13.5 20.5 0.2 131 chr2L 22191921 intron Ir40a - chr2L 22191986 intron Ir40a - chr2L 22192052 intron Ir40a - chr2L_4_22190001 chr2L_22190001 RAL-849 1277 chr2L 22191932 22191995 chr2L 22192046 22192159 7 158 17.0 13.0 15.0 0.4 227 chr2L 22191932 intron Ir40a - chr2L 22192046 intron Ir40a - chr2L 22192159 intron Ir40a - chr2L_7_22190001 chr2L_22190001 RAL-849 1278 chr2L 22197848 22197909 chr2L 22198097 22198158 12 249 9.5 11.0 10.2 1.1 310 chr2L 22197848 intron Ir40a - chr2L 22198003 intron Ir40a - chr2L 22198158 intron Ir40a - chr2L_12_22195001 chr2L_22195001 RAL-849 1279 chr2L 22212088 22212163 chr2L 22212685 22212760 16 597 14.0 13.5 13.8 1.1 672 chr2L 22212088 intron Ir40a - chr2L 22212424 intron Ir40a - chr2L 22212760 exon Ir40a - chr2L_16_22210001 chr2L_22210001 RAL-849 1280 chr2L 22215880 22215922 chr2L 22216005 22216058 12 134 23.0 20.5 21.8 0.5 178 chr2L 22215880 intergenic not near genes chr2L 22215969 intergenic not near genes chr2L 22216058 intergenic not near genes chr2L_12_22215001 chr2L_22215001 RAL-849 1281 chr2L 22258571 22258587 chr2L 22260746 22260762 G6 6 2175 16.0 22.0 19.0 0.3 2191 chr2L 22258571 intergenic Tif-IA + chr2L 22259666 intergenic not near genes chr2L 22260762 intergenic not near genes chr2L_6_22255001 chr2L_22255001 RAL-849 1282 chr2L 22258588 22258632 chr2L 22260743 22260807 G6 11 2173 8.0 21.0 14.5 0.7 2219 chr2L 22258588 intergenic Tif-IA + chr2L 22259698 intergenic not near genes chr2L 22260807 intergenic not near genes chr2L_11_22255001 chr2L_22255001 RAL-849 1283 chr2L 22294636 22294680 chr2L 22294763 22294807 5 127 13.0 16.5 14.8 0.3 171 chr2L 22294636 intergenic not near genes chr2L 22294722 intergenic not near genes chr2L 22294807 intergenic not near genes chr2L_5_22290001 chr2L_22290001 RAL-849 1284 chr2L 22345083 22345144 chr2L 22345399 22345461 11 316 13.5 10.0 11.8 0.9 378 chr2L 22345083 intron CG17018 + chr2L 22345272 intron CG17018 + chr2L 22345461 intron CG17018 + chr2L_11_22345001 chr2L_22345001 RAL-849 1285 chr2L 22446022 22446025 chr2L 22497733 22497736 5 51711 16.0 0.5 8.2 0.5 51714 chr2L 22446022 intergenic not near genes chr2L 22471879 intergenic not near genes chr2L 22497736 intergenic not near genes chr2L_5_22470001 chr2L_22470001 RAL-849 1286 chr2L 22548885 22548925 chr2L 22550133 22550200 1360 9 1259 2.0 8.0 5.0 1.5 1315 chr2L 22548885 intergenic CG17490 + chr2L 22549542 intergenic not near genes chr2L 22550200 intergenic CG17493 + chr2L_9_22545001 chr2L_22545001 RAL-849 1287 chr2L 22558344 22558410 chr2L 22558705 22558771 16 360 19.0 11.0 15.0 1.0 427 chr2L 22558344 intergenic not near genes chr2L 22558558 intergenic not near genes chr2L 22558771 intergenic not near genes chr2L_16_22555001 chr2L_22555001 RAL-849 1288 chr2L 22581931 22581999 chr2L 22583770 22583839 S-element 12 1839 7.0 7.5 7.2 1.5 1908 chr2L 22581931 intron CG17494 + chr2L 22582885 intron CG17494 + chr2L 22583839 intron CG17494 + chr2L_12_22580001 chr2L_22580001 RAL-849 1289 chr2L 22674026 22674045 chr2L 22674153 22674172 4 127 17.0 20.5 18.8 0.2 146 chr2L 22674026 intron CG40006 - chr2L 22674099 intron CG40006 - chr2L 22674172 intron CG40006 - chr2L_4_22670001 chr2L_22670001 RAL-849 1290 chr2L 22679803 22679815 chr2L 22684609 22684637 F-element 5 4819 14.0 14.5 14.2 0.3 4834 chr2L 22679803 intron CG40006 - chr2L 22682220 intron CG40006 - chr2L 22684637 intron CG40006 - chr2L_5_22680001 chr2L_22680001 RAL-849 1291 chr2L 22750677 22750731 chr2L 22750817 22750871 13 140 6.5 4.5 5.5 2.0 194 chr2L 22750677 intron CG40006 - chr2L 22750774 intron CG40006 - chr2L 22750871 intron CG40006 - chr2L_13_22750001 chr2L_22750001 RAL-849 1292 chr2L 22776380 22776444 chr2L 22778219 22778283 S-element 20 1838 5.0 5.0 5.0 3.3 1903 chr2L 22776380 intergenic not near genes chr2L 22777332 intergenic not near genes chr2L 22778283 intergenic not near genes chr2L_20_22775001 chr2L_22775001 RAL-849 1293 chr2L 22983892 22983942 chr2L 22984017 22984068 16 125 10.0 8.0 9.0 1.6 176 chr2L 22983892 intron cta + chr2L 22983980 intron cta + chr2L 22984068 intron cta + chr2L_16_22980001 chr2L_22980001 RAL-849 1294 chr2L 23006645 23006707 chr2L 23007002 23007005 5 337 17.5 15.0 16.2 0.3 360 chr2L 23006645 intron Cht3 - chr2L 23006825 intron Cht3 - chr2L 23007005 intron Cht3 - chr2L_5_23005001 chr2L_23005001 RAL-849 1295 chr2R 401633 401660 chr2R 401770 401797 4 137 21.5 17.5 19.5 0.2 164 chr2R 401633 intergenic not near genes chr2R 401715 intergenic not near genes chr2R 401797 intergenic not near genes chr2R_4_400001 chr2R_400001 RAL-849 1296 chr2R 469923 469972 chr2R 473214 473263 F-element 10 3289 1.0 3.5 2.2 3.1 3340 chr2R 469923 intergenic not near genes chr2R 471593 intergenic not near genes chr2R 473263 intergenic not near genes chr2R_10_470001 chr2R_470001 RAL-849 1297 chr2R 503084 503150 chr2R 504020 504076 297 15 933 53.0 13.5 33.2 0.4 992 chr2R 503084 intron CG40378 + chr2R 503580 intron CG40378 + chr2R 504076 intron CG40378 + chr2R_15_500001 chr2R_500001 RAL-849 1298 chr2R 529316 529347 chr2R 537991 537996 Max-element 11 8672 3.5 10.0 6.8 1.4 8680 chr2R 529316 intron CG40378 + chr2R 533656 intron CG40378 + chr2R 537996 intron CG40378 + chr2R_11_530001 chr2R_530001 RAL-849 1299 chr2R 552714 552784 chr2R 553977 553988 1360 10 1257 5.5 5.5 5.5 1.5 1274 chr2R 552714 intron CG40378 + chr2R 553351 intron CG40378 + chr2R 553988 intron CG40378 + chr2R_10_550001 chr2R_550001 RAL-849 1300 chr2R 698922 698956 chr2R 699024 699083 4 120 8.5 9.0 8.8 0.4 161 chr2R 698922 intron CG43676 + chr2R 699002 intron CG43676 + chr2R 699083 intron CG43676 + chr2R_4_695001 chr2R_695001 RAL-849 1301 chr2R 1346217 1346277 chr2R 1346369 1346433 7 155 23.0 19.5 21.2 0.3 216 chr2R 1346217 intergenic not near genes chr2R 1346325 intergenic not near genes chr2R 1346433 intergenic not near genes chr2R_7_1345001 chr2R_1345001 RAL-849 1302 chr2R 1348423 1348490 chr2R 1348550 1348611 16 126 17.5 17.5 17.5 0.9 188 chr2R 1348423 3` UTR CR44042 - chr2R 1348517 3` UTR CR44042 - chr2R 1348611 3` UTR CR44042 - chr2R_16_1345001 chr2R_1345001 RAL-849 1303 chr2R 1365827 1365878 chr2R 1365983 1366040 10 161 18.0 17.5 17.8 0.5 213 chr2R 1365827 intron l(2)41Ab + chr2R 1365934 intron l(2)41Ab + chr2R 1366040 intron l(2)41Ab + chr2R_10_1365001 chr2R_1365001 RAL-849 1304 chr2R 1516563 1516603 chr2R 1521341 1521381 1731 28 4778 22.5 14.5 18.5 1.4 4818 chr2R 1516563 exon Maf1 - chr2R 1518972 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_28_1515001 chr2R_1515001 RAL-849 1305 chr2R 1733327 1733398 chr2R 1733484 1733555 14 156 16.5 13.5 15.0 0.9 228 chr2R 1733327 intron CG41520 + chr2R 1733441 intron CG41520 + chr2R 1733555 intron CG41520 + chr2R_14_1730001 chr2R_1730001 RAL-849 1306 chr2R 2015091 2015152 chr2R 2015218 2015279 21 127 6.5 6.5 6.5 2.8 188 chr2R 2015091 intron CG17684 - chr2R 2015185 intron CG17684 - chr2R 2015279 intron CG17684 - chr2R_21_2015001 chr2R_2015001 RAL-849 1307 chr2R 2093059 2093126 chr2R 2093190 2093257 7 131 8.5 9.0 8.8 0.7 198 chr2R 2093059 intron CG17684 - chr2R 2093158 intron CG17684 - chr2R 2093257 intron CG17684 - chr2R_7_2090001 chr2R_2090001 RAL-849 1308 chr2R 2110466 2110500 chr2R 2118073 2118108 17.6 9 7608 9.5 2.0 5.8 1.3 7642 chr2R 2110466 intron CG17684 - chr2R 2114287 intron CG17684 - chr2R 2118108 intron CG17684 - chr2R_9_2110001 chr2R_2110001 RAL-849 1309 chr2R 2498948 2499007 chr2R 2508138 2508204 roo 20 9197 9.0 4.5 6.8 2.6 9256 chr2R 2498948 intron MFS17 - chr2R 2503576 intron MFS17 - chr2R 2508204 intron MFS17 - chr2R_20_2500001 chr2R_2500001 RAL-849 1310 chr2R 2508264 2508286 chr2R 2508452 2508474 13 188 9.5 3.5 6.5 1.7 210 chr2R 2508264 intron MFS17 - chr2R 2508369 intron MFS17 - chr2R 2508474 intron MFS17 - chr2R_13_2505001 chr2R_2505001 RAL-849 1311 chr2R 2529252 2529313 chr2R 2529381 2529442 12 129 22.0 25.0 23.5 0.5 190 chr2R 2529252 intron MFS17 - chr2R 2529347 intron MFS17 - chr2R 2529442 intron MFS17 - chr2R_12_2525001 chr2R_2525001 RAL-849 1312 chr2R 2591491 2591507 chr2R 2594217 2594233 roo 8 2726 42.5 26.0 34.2 0.2 2742 chr2R 2591491 intergenic not near genes chr2R 2592862 intergenic not near genes chr2R 2594233 intergenic not near genes chr2R_8_2590001 chr2R_2590001 RAL-849 1313 chr2R 2875335 2875385 chr2R 2878900 2878950 HMS-Beagle 10 3565 25.0 20.5 22.8 0.4 3615 chr2R 2875335 intergenic not near genes chr2R 2877142 intergenic not near genes chr2R 2878950 intergenic not near genes chr2R_10_2875001 chr2R_2875001 RAL-849 1314 chr2R 2942245 2942322 chr2R 2942398 2942444 19 151 18.0 21.5 19.8 0.9 199 chr2R 2942245 intron Scp1 - chr2R 2942344 intron Scp1 - chr2R 2942444 intron Scp1 - chr2R_19_2940001 chr2R_2940001 RAL-849 1315 chr2R 2944935 2945004 chr2R 2945066 2945097 10 121 20.0 18.0 19.0 0.5 162 chr2R 2944935 intron Scp1 - chr2R 2945016 intron Scp1 - chr2R 2945097 intron Scp1 - chr2R_10_2945001 chr2R_2945001 RAL-849 1316 chr2R 2950420 2950451 chr2R 2950566 2950623 9 168 17.5 14.5 16.0 0.5 203 chr2R 2950420 intron Scp1 - chr2R 2950522 intron Scp1 - chr2R 2950623 intron Scp1 - chr2R_9_2950001 chr2R_2950001 RAL-849 1317 chr2R 3089346 3089460 chr2R 3089479 3089684 5 189 7.0 7.0 7.0 0.6 338 chr2R 3089346 intron CG42596 + chr2R 3089515 intron CG42596 + chr2R 3089684 intron CG42596 + chr2R_5_3085001 chr2R_3085001 RAL-849 1318 chr2R 3144054 3144104 chr2R 3393382 3393432 Doc 12 249328 22.5 7.5 15.0 0.8 249378 chr2R 3144054 intron CG42596 + chr2R 3268743 intergenic not near genes chr2R 3393432 intergenic not near genes chr2R_12_3265001 chr2R_3265001 RAL-849 1319 chr2R 3174502 3174566 chr2R 3174644 3174708 11 142 19.5 11.5 15.5 0.7 206 chr2R 3174502 intron CG42596 + chr2R 3174605 intron CG42596 + chr2R 3174708 intron CG42596 + chr2R_11_3170001 chr2R_3170001 RAL-849 1320 chr2R 3399190 3399252 chr2R 3399326 3399388 8 136 16.5 17.5 17.0 0.4 198 chr2R 3399190 intergenic not near genes chr2R 3399289 intergenic not near genes chr2R 3399388 intergenic not near genes chr2R_8_3395001 chr2R_3395001 RAL-849 1321 chr2R 3532573 3532612 chr2R 3536066 3536105 Doc 8 3493 2.0 4.5 3.2 1.9 3532 chr2R 3532573 intergenic not near genes chr2R 3534339 intergenic not near genes chr2R 3536105 intergenic not near genes chr2R_8_3530001 chr2R_3530001 RAL-849 1322 chr2R 3702636 3702668 chr2R 3702764 3702784 8 129 11.0 13.0 12.0 0.6 148 chr2R 3702636 intergenic not near genes chr2R 3702710 intergenic not near genes chr2R 3702784 intergenic not near genes chr2R_8_3700001 chr2R_3700001 RAL-849 1323 chr2R 3291852 3292052 chr2R 3914843 3915125 4 623027 16.5 27.0 21.8 0.2 623273 chr2R 3291852 intergenic not near genes chr2R 3603488 intergenic not near genes chr2R 3915125 intron uex - chr2R_4_3600001 chr2R_3600001 RAL-849 1324 chr2R 4312909 4312979 chr2R 4313043 4313113 30 133 8.5 7.5 8.0 3.3 204 chr2R 4312909 intergenic not near genes chr2R 4313011 intergenic not near genes chr2R 4313113 intergenic not near genes chr2R_30_4310001 chr2R_4310001 RAL-849 1325 chr2R 4387295 4387297 chr2R 4387496 4387498 5 201 23.5 1.0 12.2 0.4 203 chr2R 4387295 intron Gprk1 - chr2R 4387396 intron Gprk1 - chr2R 4387498 intron Gprk1 - chr2R_5_4385001 chr2R_4385001 RAL-849 1326 chr2R 4597834 4597901 chr2R 4598340 4598407 INE-1 15 505 11.0 9.5 10.2 1.3 573 chr2R 4597834 intron p120ctn + chr2R 4598120 intron p120ctn + chr2R 4598407 intron p120ctn + chr2R_15_4595001 chr2R_4595001 RAL-849 1327 chr2R 4603315 4603367 chr2R 4603431 4603455 17 125 13.5 10.0 11.8 1.3 140 chr2R 4603315 intron p120ctn + chr2R 4603385 intron p120ctn + chr2R 4603455 intron p120ctn + chr2R_17_4600001 chr2R_4600001 RAL-849 1328 chr2R 4605648 4605685 chr2R 4606094 4606139 10 449 10.5 19.5 15.0 0.6 491 chr2R 4605648 intron p120ctn + chr2R 4605894 intron p120ctn + chr2R 4606139 intron p120ctn + chr2R_10_4605001 chr2R_4605001 RAL-849 1329 chr2R 4621266 4621341 chr2R 4621856 4621931 27 589 6.0 9.0 7.5 3.2 665 chr2R 4621266 3` UTR CR44101 - chr2R 4621598 3` UTR CR44101 - chr2R 4621931 3` UTR CR44101 - chr2R_27_4620001 chr2R_4620001 RAL-849 1330 chr2R 4622911 4622977 chr2R 4624120 4624186 1360 25 1208 8.5 10.0 9.2 2.5 1275 chr2R 4622911 intergenic CR44101 - chr2R 4623548 intergenic not near genes chr2R 4624186 intergenic not near genes chr2R_25_4620001 chr2R_4620001 RAL-849 1331 chr2R 4624606 4624664 chr2R 4626561 4626619 Bica 14 1951 20.0 20.0 20.0 0.7 2013 chr2R 4624606 intergenic not near genes chr2R 4625612 intergenic not near genes chr2R 4626619 intergenic not near genes chr2R_14_4625001 chr2R_4625001 RAL-849 1332 chr2R 4688106 4688116 chr2R 4688249 4688259 5 143 15.0 17.0 16.0 0.3 153 chr2R 4688106 intergenic not near genes chr2R 4688182 intergenic not near genes chr2R 4688259 intergenic not near genes chr2R_5_4685001 chr2R_4685001 RAL-849 1333 chr2R 4704773 4704849 chr2R 4705139 4705174 21 358 21.5 16.0 18.8 1.1 401 chr2R 4704773 intron Nipped-B - chr2R 4704974 intron Nipped-B - chr2R 4705174 intron Nipped-B - chr2R_21_4700001 chr2R_4700001 RAL-849 1334 chr2R 4731906 4731945 chr2R 4732039 4732078 5 133 25.0 19.5 22.2 0.2 172 chr2R 4731906 intergenic not near genes chr2R 4731992 intergenic not near genes chr2R 4732078 intergenic not near genes chr2R_5_4730001 chr2R_4730001 RAL-849 1335 chr2R 4782779 4782787 chr2R 4782918 4782938 4 148 4.5 17.0 10.8 0.3 159 chr2R 4782779 intergenic not near genes chr2R 4782858 intergenic not near genes chr2R 4782938 intergenic not near genes chr2R_4_4780001 chr2R_4780001 RAL-849 1336 chr2R 4783205 4783441 chr2R 4783389 4783494 30 156 22.5 20.0 21.2 1.4 289 chr2R 4783205 intergenic not near genes chr2R 4783350 intergenic not near genes chr2R 4783494 intergenic not near genes chr2R_30_4780001 chr2R_4780001 RAL-849 1337 chr2R 4821172 4821245 chr2R 4821308 4821381 24 135 4.0 4.0 4.0 4.8 209 chr2R 4821172 intron CG17528 - chr2R 4821276 intron CG17528 - chr2R 4821381 intron CG17528 - chr2R_24_4820001 chr2R_4820001 RAL-849 1338 chr2R 4825123 4825123 chr2R 22311212 22311217 4 17486092 29.5 24.0 26.8 0.1 17486094 chr2R 4825123 intergenic not near genes chr2R 13568170 intergenic not near genes chr2R 22311217 intron wdp - chr2R_4_13565001 chr2R_13565001 RAL-849 1339 chr2R 4838832 4838896 chr2R 4840405 4840469 transib2 22 1573 13.5 12.0 12.8 1.6 1637 chr2R 4838832 intergenic not near genes chr2R 4839650 intergenic not near genes chr2R 4840469 intergenic not near genes chr2R_22_4835001 chr2R_4835001 RAL-849 1340 chr2R 4870693 4870741 chr2R 4871254 4871302 R1A1-element 18 560 9.5 6.0 7.8 2.0 609 chr2R 4870693 intergenic not near genes chr2R 4870998 intergenic not near genes chr2R 4871302 intergenic not near genes chr2R_18_4870001 chr2R_4870001 RAL-849 1341 chr2R 4887576 4887625 chr2R 4887822 4887871 9 246 21.5 20.5 21.0 0.4 295 chr2R 4887576 intergenic not near genes chr2R 4887724 intergenic not near genes chr2R 4887871 intergenic not near genes chr2R_9_4885001 chr2R_4885001 RAL-849 1342 chr2R 4916052 4916113 chr2R 4916180 4916241 13 128 14.0 22.5 18.2 0.7 189 chr2R 4916052 intergenic not near genes chr2R 4916146 intergenic not near genes chr2R 4916241 intergenic not near genes chr2R_13_4915001 chr2R_4915001 RAL-849 1343 chr2R 4933352 4933375 chr2R 4933966 4933969 7 610 15.5 30.0 22.8 0.3 617 chr2R 4933352 intron Ir41a + chr2R 4933660 intron Ir41a + chr2R 4933969 intron Ir41a + chr2R_7_4930001 chr2R_4930001 RAL-849 1344 chr2R 4938464 4938521 chr2R 4938650 4938707 9 186 27.0 27.0 27.0 0.3 243 chr2R 4938464 intron Ir41a + chr2R 4938586 intron Ir41a + chr2R 4938707 intron Ir41a + chr2R_9_4935001 chr2R_4935001 RAL-849 1345 chr2R 4970691 4970711 chr2R 4970819 4970839 7 128 45.5 33.5 39.5 0.2 148 chr2R 4970691 intron Ir41a + chr2R 4970765 intron Ir41a + chr2R 4970839 intron Ir41a + chr2R_7_4970001 chr2R_4970001 RAL-849 1346 chr2R 5019229 5019302 chr2R 5019365 5019438 11 136 16.5 17.5 17.0 0.6 209 chr2R 5019229 intron Ir41a + chr2R 5019334 intron Ir41a + chr2R 5019438 intron Ir41a + chr2R_11_5015001 chr2R_5015001 RAL-849 1347 chr2R 5029010 5029056 chr2R 5029129 5029188 9 128 43.5 43.0 43.2 0.2 178 chr2R 5029010 intergenic not near genes chr2R 5029099 intergenic not near genes chr2R 5029188 intergenic not near genes chr2R_9_5025001 chr2R_5025001 RAL-849 1348 chr2R 5038483 5038498 chr2R 5039330 5039333 5 844 32.5 6.5 19.5 0.2 850 chr2R 5038483 intergenic not near genes chr2R 5038908 intergenic not near genes chr2R 5039333 intergenic not near genes chr2R_5_5035001 chr2R_5035001 RAL-849 1349 chr2R 5040746 5040764 chr2R 5041286 5041304 7 540 3.5 12.5 8.0 0.8 558 chr2R 5040746 intergenic not near genes chr2R 5041025 intergenic not near genes chr2R 5041304 intergenic not near genes chr2R_7_5040001 chr2R_5040001 RAL-849 1350 chr2R 5062755 5062767 chr2R 5062898 5062911 9 144 31.5 28.5 30.0 0.3 156 chr2R 5062755 intergenic not near genes chr2R 5062833 intergenic not near genes chr2R 5062911 intergenic not near genes chr2R_9_5060001 chr2R_5060001 RAL-849 1351 chr2R 5075220 5075243 chr2R 5075761 5075784 7 541 21.5 22.0 21.8 0.3 564 chr2R 5075220 intergenic not near genes chr2R 5075502 intergenic not near genes chr2R 5075784 intergenic not near genes chr2R_7_5075001 chr2R_5075001 RAL-849 1352 chr2R 5078634 5078678 chr2R 5078794 5078838 8 160 22.0 19.0 20.5 0.4 204 chr2R 5078634 intergenic not near genes chr2R 5078736 intergenic not near genes chr2R 5078838 intergenic not near genes chr2R_8_5075001 chr2R_5075001 RAL-849 1353 chr2R 5080753 5080810 chr2R 5080889 5080945 17 138 17.5 18.5 18.0 0.9 192 chr2R 5080753 intergenic not near genes chr2R 5080849 intergenic not near genes chr2R 5080945 intergenic not near genes chr2R_17_5080001 chr2R_5080001 RAL-849 1354 chr2R 5117888 5117913 chr2R 5118348 5118373 INE-1 4 460 15.0 23.0 19.0 0.2 485 chr2R 5117888 intron gus - chr2R 5118130 intron gus - chr2R 5118373 intron gus - chr2R_4_5115001 chr2R_5115001 RAL-849 1355 chr2R 5125196 5125267 chr2R 5125564 5125635 18 367 5.0 3.5 4.2 3.5 439 chr2R 5125196 intron gus - chr2R 5125416 intron gus - chr2R 5125635 intron gus - chr2R_18_5125001 chr2R_5125001 RAL-849 1356 chr2R 5139977 5140019 chr2R 5140146 5140188 10 168 22.0 18.0 20.0 0.5 211 chr2R 5139977 intergenic not near genes chr2R 5140082 intergenic not near genes chr2R 5140188 intergenic not near genes chr2R_10_5140001 chr2R_5140001 RAL-849 1357 chr2R 5192691 5192726 chr2R 5192818 5192853 6 127 16.0 17.0 16.5 0.3 162 chr2R 5192691 intron Nipped-A - chr2R 5192772 intron Nipped-A - chr2R 5192853 intron Nipped-A - chr2R_6_5190001 chr2R_5190001 RAL-849 1358 chr2R 5237299 5237356 chr2R 5237431 5237460 14 130 8.0 0.0 4.0 2.8 161 chr2R 5237299 intron Nipped-A - chr2R 5237380 intron Nipped-A - chr2R 5237460 intron Nipped-A - chr2R_14_5235001 chr2R_5235001 RAL-849 1359 chr2R 5301817 5301880 chr2R 5301946 5302026 12 134 46.0 30.0 38.0 0.3 209 chr2R 5301817 intergenic not near genes chr2R 5301922 intergenic not near genes chr2R 5302026 intergenic not near genes chr2R_12_5300001 chr2R_5300001 RAL-849 1360 chr2R 5417950 5418017 chr2R 5420632 5420699 Burdock 23 2682 8.0 10.0 9.0 2.3 2749 chr2R 5417950 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420699 intron laccase2 + chr2R_23_5415001 chr2R_5415001 RAL-849 1361 chr2R 5472321 5472390 chr2R 5472466 5472535 18 144 11.5 7.0 9.2 1.8 214 chr2R 5472321 intron CG30440 - chr2R 5472428 intron CG30440 - chr2R 5472535 intron CG30440 - chr2R_18_5470001 chr2R_5470001 RAL-849 1362 chr2R 5472407 5472443 chr2R 5472872 5472900 7 468 7.0 21.5 14.2 0.5 493 chr2R 5472407 intron CG30440 - chr2R 5472654 intron CG30440 - chr2R 5472900 intron CG30440 - chr2R_7_5470001 chr2R_5470001 RAL-849 1363 chr2R 5473331 5473384 chr2R 5473474 5473529 15 145 36.5 36.5 36.5 0.4 198 chr2R 5473331 intron CG30440 - chr2R 5473430 intron CG30440 - chr2R 5473529 intron CG30440 - chr2R_15_5470001 chr2R_5470001 RAL-849 1364 chr2R 5475406 5475473 chr2R 5475720 5475787 10 314 7.0 14.0 10.5 0.9 381 chr2R 5475406 intron CG30440 - chr2R 5475596 intron CG30440 - chr2R 5475787 intron CG30440 - chr2R_10_5475001 chr2R_5475001 RAL-849 1365 chr2R 5476312 5476353 chr2R 5476901 5476940 6 592 25.5 28.5 27.0 0.2 628 chr2R 5476312 intron CG30440 - chr2R 5476626 intron CG30440 - chr2R 5476940 intron CG30440 - chr2R_6_5475001 chr2R_5475001 RAL-849 1366 chr2R 5484992 5485047 chr2R 5485212 5485267 11 219 20.0 30.0 25.0 0.4 275 chr2R 5484992 intron CG30440 - chr2R 5485130 intron CG30440 - chr2R 5485267 intron CG30440 - chr2R_11_5485001 chr2R_5485001 RAL-849 1367 chr2R 5491616 5491676 chr2R 5491759 5491819 8 143 22.5 25.5 24.0 0.3 203 chr2R 5491616 intron CG30440 - chr2R 5491718 intron CG30440 - chr2R 5491819 intron CG30440 - chr2R_8_5490001 chr2R_5490001 RAL-849 1368 chr2R 5497645 5497662 chr2R 5498449 5498469 INE-1 4 806 13.5 18.5 16.0 0.2 824 chr2R 5497645 intron CG30438 + chr2R 5498057 intron CG30438 + chr2R 5498469 intron CG30438 + chr2R_4_5495001 chr2R_5495001 RAL-849 1369 chr2R 5509512 5509548 chr2R 5509651 5509693 5 144 13.5 21.0 17.2 0.3 181 chr2R 5509512 intron CG30438 + chr2R 5509602 intron CG30438 + chr2R 5509693 intron CG30438 + chr2R_5_5505001 chr2R_5505001 RAL-849 1370 chr2R 5541641 5541698 chr2R 5541772 5541829 9 131 22.0 20.5 21.2 0.4 188 chr2R 5541641 intron CG30438 + chr2R 5541735 intron CG30438 + chr2R 5541829 intron CG30438 + chr2R_9_5540001 chr2R_5540001 RAL-849 1371 chr2R 5653323 5653383 chr2R 5653472 5653532 23 149 7.0 9.0 8.0 2.6 209 chr2R 5653323 intergenic CG1344 + chr2R 5653428 intergenic CG1344 + chr2R 5653532 intergenic CG1344 + chr2R_23_5650001 chr2R_5650001 RAL-849 1372 chr2R 5664239 5664309 chr2R 5664369 5664439 22 126 9.0 10.0 9.5 2.1 200 chr2R 5664239 5` UTR CR45472 + chr2R 5664339 intron CR45472 + chr2R 5664439 intron CR45472 + chr2R_22_5660001 chr2R_5660001 RAL-849 1373 chr2R 5674546 5674617 chr2R 5674679 5674750 5 133 5.5 4.0 4.8 0.9 204 chr2R 5674546 intergenic not near genes chr2R 5674648 intergenic not near genes chr2R 5674750 intergenic not near genes chr2R_5_5670001 chr2R_5670001 RAL-849 1374 chr2R 5712261 5712318 chr2R 5712388 5712445 17 127 23.0 24.5 23.8 0.7 184 chr2R 5712261 intron ap - chr2R 5712353 intron ap - chr2R 5712445 intron ap - chr2R_17_5710001 chr2R_5710001 RAL-849 1375 chr2R 5743948 5743983 chr2R 5744080 5744115 8 132 22.0 19.5 20.8 0.4 167 chr2R 5743948 intergenic not near genes chr2R 5744032 intergenic not near genes chr2R 5744115 intergenic not near genes chr2R_8_5740001 chr2R_5740001 RAL-849 1376 chr2R 5750411 5750448 chr2R 5750547 5750590 10 137 12.0 6.5 9.2 1.0 179 chr2R 5750411 intergenic not near genes chr2R 5750500 intergenic not near genes chr2R 5750590 intergenic not near genes chr2R_10_5750001 chr2R_5750001 RAL-849 1377 chr2R 5774234 5774273 chr2R 5774538 5774577 6 304 13.5 8.5 11.0 0.5 343 chr2R 5774234 3` UTR Gp210 + chr2R 5774406 intergenic Gp210 +,ZnT41F - chr2R 5774577 intergenic ZnT41F -,Gp210 + chr2R_6_5770001 chr2R_5770001 RAL-849 1378 chr2R 5812121 5812170 chr2R 5812248 5812292 10 124 20.0 16.5 18.2 0.5 171 chr2R 5812121 intron dpr12 + chr2R 5812206 intron dpr12 + chr2R 5812292 intron dpr12 + chr2R_10_5810001 chr2R_5810001 RAL-849 1379 chr2R 5832373 5832430 chr2R 5832551 5832608 13 178 16.0 12.0 14.0 0.9 235 chr2R 5832373 intron dpr12 + chr2R 5832490 intron dpr12 + chr2R 5832608 intron dpr12 + chr2R_13_5830001 chr2R_5830001 RAL-849 1380 chr2R 5859947 5859978 chr2R 5860109 5860140 4 162 18.0 20.0 19.0 0.2 193 chr2R 5859947 3` UTR dpr12 + chr2R 5860044 3` UTR dpr12 + chr2R 5860140 3` UTR dpr12 + chr2R_4_5860001 chr2R_5860001 RAL-849 1381 chr2R 5869231 5869301 chr2R 5874357 5874431 flea 26 5128 8.0 6.5 7.2 3.2 5200 chr2R 5869231 intergenic not near genes chr2R 5871831 intergenic not near genes chr2R 5874431 intergenic not near genes chr2R_26_5870001 chr2R_5870001 RAL-849 1382 chr2R 5878882 5878952 chr2R 5879012 5879082 27 128 5.5 3.5 4.5 4.9 200 chr2R 5878882 intergenic CG44438 - chr2R 5878982 intergenic CG44438 - chr2R 5879082 intergenic CG44438 - chr2R_27_5875001 chr2R_5875001 RAL-849 1383 chr2R 5885316 5885370 chr2R 5885495 5885549 18 179 5.5 4.0 4.8 3.1 233 chr2R 5885316 5` UTR CR44125 + chr2R 5885432 5` UTR CR44125 + chr2R 5885549 5` UTR CR44125 + chr2R_18_5885001 chr2R_5885001 RAL-849 1384 chr2R 5888110 5888184 chr2R 5888273 5888347 18 161 21.0 16.5 18.8 0.9 237 chr2R 5888110 intergenic not near genes chr2R 5888228 intergenic not near genes chr2R 5888347 intergenic not near genes chr2R_18_5885001 chr2R_5885001 RAL-849 1385 chr2R 5902114 5902185 chr2R 5909723 5909794 17.6 15 7609 6.5 4.5 5.5 2.3 7680 chr2R 5902114 5` UTR CG43366 + chr2R 5905954 intron CG43366 + chr2R 5909794 intron CG43366 + chr2R_15_5905001 chr2R_5905001 RAL-849 1386 chr2R 5947248 5947297 chr2R 5947376 5947425 13 128 14.0 7.5 10.8 1.1 177 chr2R 5947248 intergenic not near genes chr2R 5947336 intergenic not near genes chr2R 5947425 intergenic not near genes chr2R_13_5945001 chr2R_5945001 RAL-849 1387 chr2R 5947890 5947913 chr2R 5948091 5948114 9 200 24.5 15.5 20.0 0.4 224 chr2R 5947890 intergenic not near genes chr2R 5948002 intergenic not near genes chr2R 5948114 intergenic not near genes chr2R_9_5945001 chr2R_5945001 RAL-849 1388 chr2R 5967239 5967280 chr2R 5967358 5967420 10 138 19.0 17.5 18.2 0.5 181 chr2R 5967239 intergenic CR44127 -,CG7881 - chr2R 5967330 intergenic CR44127 -,CG7881 - chr2R 5967420 3` UTR CR44127 - chr2R_10_5965001 chr2R_5965001 RAL-849 1389 chr2R 6015686 6015749 chr2R 6015817 6015880 6 131 23.0 24.5 23.8 0.2 194 chr2R 6015686 5` UTR Act42A - chr2R 6015783 intergenic Act42A - chr2R 6015880 intergenic Act42A - chr2R_6_6015001 chr2R_6015001 RAL-849 1390 chr2R 6024990 6025172 chr2R 6025133 6025430 13 227 12.0 8.5 10.2 1.2 440 chr2R 6024990 intergenic not near genes chr2R 6025210 intergenic not near genes chr2R 6025430 intergenic not near genes chr2R_13_6025001 chr2R_6025001 RAL-849 1391 chr2R 6033414 6033438 chr2R 6033549 6033573 8 135 17.0 18.5 17.8 0.4 159 chr2R 6033414 intron SCAP - chr2R 6033494 intron SCAP - chr2R 6033573 intron SCAP - chr2R_8_6030001 chr2R_6030001 RAL-849 1392 chr2R 6033453 6033463 chr2R 6033528 6033598 5 123 13.5 14.0 13.8 0.3 145 chr2R 6033453 intron SCAP - chr2R 6033526 intron SCAP - chr2R 6033598 intron SCAP - chr2R_5_6030001 chr2R_6030001 RAL-849 1393 chr2R 6039887 6039950 chr2R 6040147 6040210 17 258 18.0 15.0 16.5 1.0 323 chr2R 6039887 intron CG14591 - chr2R 6040048 intron CG14591 - chr2R 6040210 intron CG14591 - chr2R_17_6040001 chr2R_6040001 RAL-849 1394 chr2R 6050264 6050329 chr2R 6050407 6050468 11 140 8.5 0.0 4.2 2.1 204 chr2R 6050264 intron CG34212 - chr2R 6050366 intergenic CG34212 - chr2R 6050468 intergenic CG34212 -,CCHa2-R + chr2R_11_6050001 chr2R_6050001 RAL-849 1395 chr2R 6065715 6065777 chr2R 6065876 6065911 22 156 7.5 10.0 8.8 2.2 196 chr2R 6065715 intron CCHa2-R + chr2R 6065813 intron CCHa2-R + chr2R 6065911 exon CCHa2-R + chr2R_22_6065001 chr2R_6065001 RAL-849 1396 chr2R 6088323 6088389 chr2R 6088466 6088532 33 143 9.5 10.0 9.8 3.1 209 chr2R 6088323 intergenic not near genes chr2R 6088428 intergenic not near genes chr2R 6088532 intergenic not near genes chr2R_33_6085001 chr2R_6085001 RAL-849 1397 chr2R 6096675 6096733 chr2R 6101923 6101981 BS 21 5244 18.0 16.0 17.0 1.2 5306 chr2R 6096675 intron EcR - chr2R 6099328 intron EcR - chr2R 6101981 intron EcR - chr2R_21_6095001 chr2R_6095001 RAL-849 1398 chr2R 6096734 6096750 chr2R 6101912 6101928 BS 4 5207 12.5 12.5 12.5 0.3 5194 chr2R 6096734 intron EcR - chr2R 6099331 intron EcR - chr2R 6101928 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-849 1399 chr2R 6129280 6129339 chr2R 6129408 6129467 24 128 16.5 7.5 12.0 1.8 187 chr2R 6129280 intron EcR - chr2R 6129374 intron EcR - chr2R 6129467 intron EcR - chr2R_24_6125001 chr2R_6125001 RAL-849 1400 chr2R 6133964 6134034 chr2R 6134129 6134194 19 164 28.0 31.5 29.8 0.6 230 chr2R 6133964 intron EcR - chr2R 6134079 intron EcR - chr2R 6134194 intron EcR - chr2R_19_6130001 chr2R_6130001 RAL-849 1401 chr2R 6144368 6144431 chr2R 6144502 6144565 17 134 21.5 20.0 20.8 0.8 197 chr2R 6144368 intron EcR - chr2R 6144466 intron EcR - chr2R 6144565 intron EcR - chr2R_17_6140001 chr2R_6140001 RAL-849 1402 chr2R 6168163 6168219 chr2R 6168294 6168351 11 132 14.0 18.5 16.2 0.6 188 chr2R 6168163 intron EcR - chr2R 6168257 intron EcR - chr2R 6168351 intron EcR - chr2R_11_6165001 chr2R_6165001 RAL-849 1403 chr2R 6178071 6178141 chr2R 6178247 6178317 37 176 3.5 6.5 5.0 6.2 246 chr2R 6178071 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178317 intergenic not near genes chr2R_37_6175001 chr2R_6175001 RAL-849 1404 chr2R 6178655 6178707 chr2R 6178792 6178844 6 137 15.0 20.5 17.8 0.3 189 chr2R 6178655 intergenic not near genes chr2R 6178750 intergenic not near genes chr2R 6178844 intergenic not near genes chr2R_6_6175001 chr2R_6175001 RAL-849 1405 chr2R 6194654 6194691 chr2R 6194787 6194805 7 130 12.5 16.0 14.2 0.5 151 chr2R 6194654 intron Ptr - chr2R 6194730 intron Ptr - chr2R 6194805 intron Ptr - chr2R_7_6190001 chr2R_6190001 RAL-849 1406 chr2R 6215616 6215674 chr2R 6215743 6215801 8 122 17.0 17.5 17.2 0.4 185 chr2R 6215616 intron bin3 + chr2R 6215708 intron bin3 + chr2R 6215801 intron bin3 + chr2R_8_6215001 chr2R_6215001 RAL-849 1407 chr2R 6226870 6226919 chr2R 6227033 6227082 10 163 18.5 18.5 18.5 0.5 212 chr2R 6226870 intron,3` UTR bin3 +,tomboy40 + chr2R 6226976 intron bin3 + chr2R 6227082 intron bin3 + chr2R_10_6225001 chr2R_6225001 RAL-849 1408 chr2R 6494492 6494546 chr2R 6499304 6499358 F-element 4 4812 3.5 1.5 2.5 1.1 4866 chr2R 6494492 intergenic not near genes chr2R 6496925 intergenic not near genes chr2R 6499358 intergenic not near genes chr2R_4_6495001 chr2R_6495001 RAL-849 1409 chr2R 6530720 6530796 chr2R 6530850 6530926 24 128 5.5 6.0 5.8 3.5 206 chr2R 6530720 intron jing + chr2R 6530823 intron jing + chr2R 6530926 intron jing + chr2R_24_6530001 chr2R_6530001 RAL-849 1410 chr2R 6541036 6541093 chr2R 6541162 6541208 11 125 18.0 17.0 17.5 0.6 172 chr2R 6541036 intron jing + chr2R 6541122 intron jing + chr2R 6541208 intron jing + chr2R_11_6540001 chr2R_6540001 RAL-849 1411 chr2R 6551951 6552019 chr2R 6552104 6552172 17 152 22.5 21.0 21.8 0.7 221 chr2R 6551951 intron jing + chr2R 6552062 intron jing + chr2R 6552172 intron jing + chr2R_17_6550001 chr2R_6550001 RAL-849 1412 chr2R 6579734 6579804 chr2R 6584867 6584941 flea 18 5136 8.5 8.0 8.2 2.0 5207 chr2R 6579734 intron jing + chr2R 6582338 intron jing + chr2R 6584941 intron jing + chr2R_18_6580001 chr2R_6580001 RAL-849 1413 chr2R 6622109 6622155 chr2R 6622631 6622677 invader1 10 522 18.5 18.0 18.2 0.5 568 chr2R 6622109 intergenic not near genes chr2R 6622393 intergenic not near genes chr2R 6622677 intergenic not near genes chr2R_10_6620001 chr2R_6620001 RAL-849 1414 chr2R 6699583 6699611 chr2R 6699718 6699746 4 135 10.5 14.0 12.2 0.3 163 chr2R 6699583 intergenic Rab2 + chr2R 6699664 intergenic Rab2 + chr2R 6699746 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_4_6695001 chr2R_6695001 RAL-849 1415 chr2R 6706921 6706995 chr2R 6707232 6707306 8 309 18.5 27.5 23.0 0.3 385 chr2R 6706921 intron,intron CG3409 -,CG45092 - chr2R 6707114 intron,intron CG3409 -,CG45092 - chr2R 6707306 intron,intron,5` UTR CG3409 -,CG45092 -,CR43611 + chr2R_8_6705001 chr2R_6705001 RAL-849 1416 chr2R 6712548 6712601 chr2R 6712683 6712748 17 146 7.5 9.5 8.5 1.8 200 chr2R 6712548 intron,intron CG3409 -,CG45092 - chr2R 6712648 intron,intron CG3409 -,CG45092 - chr2R 6712748 intron,intron CG3409 -,CG45092 - chr2R_17_6710001 chr2R_6710001 RAL-849 1417 chr2R 6738802 6738808 chr2R 6738934 6738940 8 132 23.5 7.5 15.5 0.5 138 chr2R 6738802 intron l(2)01289 - chr2R 6738871 intron l(2)01289 - chr2R 6738940 intron l(2)01289 - chr2R_8_6735001 chr2R_6735001 RAL-849 1418 chr2R 6738809 6738869 chr2R 6738931 6739001 29 130 12.0 7.0 9.5 2.8 192 chr2R 6738809 intron l(2)01289 - chr2R 6738905 intron l(2)01289 - chr2R 6739001 intron l(2)01289 - chr2R_29_6735001 chr2R_6735001 RAL-849 1419 chr2R 6819830 6819898 chr2R 6819961 6820029 13 129 24.0 28.0 26.0 0.5 199 chr2R 6819830 intergenic not near genes chr2R 6819930 intergenic not near genes chr2R 6820029 intergenic not near genes chr2R_13_6815001 chr2R_6815001 RAL-849 1420 chr2R 6861532 6861603 chr2R 6861660 6861730 11 128 19.0 21.5 20.2 0.5 198 chr2R 6861532 intergenic coro - chr2R 6861631 intergenic coro - chr2R 6861730 intergenic coro - chr2R_11_6860001 chr2R_6860001 RAL-849 1421 chr2R 6876175 6876236 chr2R 6876307 6876368 15 126 24.0 25.0 24.5 0.6 193 chr2R 6876175 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876272 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876368 5` UTR,intron CR44169 +,Spn42Da - chr2R_15_6875001 chr2R_6875001 RAL-849 1422 chr2R 6952143 6952179 chr2R 6959773 6959819 opus 10 7637 7.0 7.5 7.2 1.2 7676 chr2R 6952143 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955981 intron,intron mim -,CheB42c - chr2R 6959819 intron,intron mim -,CheB42c - chr2R_10_6955001 chr2R_6955001 RAL-849 1423 chr2R 6964232 6964282 chr2R 6964359 6964409 12 127 33.0 27.0 30.0 0.4 177 chr2R 6964232 intron,intron mim -,CheB42c - chr2R 6964320 intron,intron mim -,CheB42c - chr2R 6964409 intron,intron mim -,CheB42c - chr2R_12_6960001 chr2R_6960001 RAL-849 1424 chr2R 6978595 6978653 chr2R 6978828 6978886 10 233 18.0 18.5 18.2 0.5 291 chr2R 6978595 exon vimar - chr2R 6978740 intron vimar - chr2R 6978886 intron vimar - chr2R_10_6975001 chr2R_6975001 RAL-849 1425 chr2R 7009264 7009322 chr2R 7009648 7009704 8 384 13.5 32.0 22.8 0.3 440 chr2R 7009264 intergenic Tsp42Ed - chr2R 7009484 intergenic Tsp42Ed - chr2R 7009704 3` UTR Tsp42Ed - chr2R_8_7005001 chr2R_7005001 RAL-849 1426 chr2R 7025856 7025923 chr2R 7025995 7026002 14 133 29.5 29.0 29.2 0.5 146 chr2R 7025856 intron Tsp42Ef + chr2R 7025929 intron Tsp42Ef + chr2R 7026002 intron Tsp42Ef + chr2R_14_7025001 chr2R_7025001 RAL-849 1427 chr2R 7029662 7029704 chr2R 7029803 7029845 7 139 22.5 21.5 22.0 0.3 183 chr2R 7029662 intron Tsp42Eg + chr2R 7029754 intron Tsp42Eg + chr2R 7029845 intron Tsp42Eg + chr2R_7_7025001 chr2R_7025001 RAL-849 1428 chr2R 7102627 7102670 chr2R 7102777 7102820 4 150 13.5 12.0 12.8 0.3 193 chr2R 7102627 intron esn + chr2R 7102724 intron esn + chr2R 7102820 intron esn + chr2R_4_7100001 chr2R_7100001 RAL-849 1429 chr2R 7139859 7139945 chr2R 7141413 7141476 hopper2 6 1545 0.0 8.5 4.2 1.2 1617 chr2R 7139859 intergenic not near genes chr2R 7140668 intergenic not near genes chr2R 7141476 intergenic not near genes chr2R_6_7140001 chr2R_7140001 RAL-849 1430 chr2R 7153132 7153192 chr2R 7153253 7153328 25 134 6.0 14.0 10.0 2.3 196 chr2R 7153132 intron,exon pk +,Spn43Ab - chr2R 7153230 intron,intron pk +,Spn43Ab - chr2R 7153328 intron,intron pk +,Spn43Ab - chr2R_25_7150001 chr2R_7150001 RAL-849 1431 chr2R 7173765 7173804 chr2R 7174068 7174107 8 303 15.0 22.0 18.5 0.4 342 chr2R 7173765 intron pk + chr2R 7173936 intron pk + chr2R 7174107 intron pk + chr2R_8_7170001 chr2R_7170001 RAL-849 1432 chr2R 7196535 7196588 chr2R 7201360 7201413 F-element 15 4825 10.0 9.0 9.5 1.4 4878 chr2R 7196535 intron pk + chr2R 7198974 intron pk + chr2R 7201413 intron pk + chr2R_15_7195001 chr2R_7195001 RAL-849 1433 chr2R 7209846 7209866 chr2R 7217644 7217664 roo 9 7799 2.5 14.5 8.5 0.9 7818 chr2R 7209846 intron pk + chr2R 7213755 intron pk + chr2R 7217664 intron pk + chr2R_9_7210001 chr2R_7210001 RAL-849 1434 chr2R 7226604 7226669 chr2R 7226738 7226814 11 138 17.5 27.0 22.2 0.5 210 chr2R 7226604 intergenic not near genes chr2R 7226709 intergenic not near genes chr2R 7226814 intergenic not near genes chr2R_11_7225001 chr2R_7225001 RAL-849 1435 chr2R 7235778 7235837 chr2R 7240920 7240975 jockey 11 5142 9.0 4.0 6.5 1.5 5197 chr2R 7235778 intergenic not near genes chr2R 7238376 intergenic not near genes chr2R 7240975 intergenic not near genes chr2R_11_7235001 chr2R_7235001 RAL-849 1436 chr2R 7254758 7254835 chr2R 7254923 7254989 12 159 15.5 13.0 14.2 0.8 231 chr2R 7254758 5` UTR CR45280 + chr2R 7254874 5` UTR CR45280 + chr2R 7254989 5` UTR CR45280 + chr2R_12_7250001 chr2R_7250001 RAL-849 1437 chr2R 7272207 7272235 chr2R 7272343 7272377 6 136 13.0 7.0 10.0 0.5 170 chr2R 7272207 intergenic Br140 - chr2R 7272292 3` UTR Br140 - chr2R 7272377 3` UTR Br140 - chr2R_6_7270001 chr2R_7270001 RAL-849 1438 chr2R 7290145 7290217 chr2R 7290297 7290369 19 152 5.5 5.5 5.5 2.9 224 chr2R 7290145 intron pwn + chr2R 7290257 intron pwn + chr2R 7290369 intron pwn + chr2R_19_7290001 chr2R_7290001 RAL-849 1439 chr2R 7310723 7310791 chr2R 7310855 7310889 43 129 7.5 8.0 7.8 4.9 166 chr2R 7310723 intergenic not near genes chr2R 7310806 intergenic not near genes chr2R 7310889 intergenic not near genes chr2R_43_7310001 chr2R_7310001 RAL-849 1440 chr2R 7359832 7359840 chr2R 7360117 7360150 5 301 27.5 27.0 27.2 0.2 318 chr2R 7359832 intron Dscam1 - chr2R 7359991 intron Dscam1 - chr2R 7360150 intron Dscam1 - chr2R_5_7355001 chr2R_7355001 RAL-849 1441 chr2R 7389525 7389530 chr2R 7389677 7389682 4 152 30.0 23.0 26.5 0.1 157 chr2R 7389525 intron CG11107 + chr2R 7389604 intron CG11107 + chr2R 7389682 intron CG11107 + chr2R_4_7385001 chr2R_7385001 RAL-849 1442 chr2R 7389531 7389598 chr2R 7389676 7389750 21 152 26.0 23.0 24.5 0.8 219 chr2R 7389531 intron CG11107 + chr2R 7389640 intron CG11107 + chr2R 7389750 intron CG11107 + chr2R_21_7385001 chr2R_7385001 RAL-849 1443 chr2R 7417853 7418150 chr2R 7417989 7418279 20 132 19.5 25.0 22.2 0.9 426 chr2R 7417853 intergenic not near genes chr2R 7418066 intergenic not near genes chr2R 7418279 intergenic not near genes chr2R_20_7415001 chr2R_7415001 RAL-849 1444 chr2R 7434874 7434905 chr2R 7439219 7439256 Juan 11 4350 6.0 15.5 10.8 0.9 4382 chr2R 7434874 intergenic so + chr2R 7437065 intergenic not near genes chr2R 7439256 intergenic not near genes chr2R_11_7435001 chr2R_7435001 RAL-849 1445 chr2R 7475097 7475163 chr2R 7475285 7475351 19 187 25.5 22.5 24.0 0.8 254 chr2R 7475097 intron Aldh-III - chr2R 7475224 intron Aldh-III - chr2R 7475351 exon Aldh-III - chr2R_19_7475001 chr2R_7475001 RAL-849 1446 chr2R 7551648 7551708 chr2R 7551789 7551843 16 140 26.5 31.5 29.0 0.5 195 chr2R 7551648 intron Corin + chr2R 7551746 intron Corin + chr2R 7551843 intron Corin + chr2R_16_7550001 chr2R_7550001 RAL-849 1447 chr2R 7608340 7608423 chr2R 7613607 7613676 I-element 12 5253 6.0 5.5 5.8 1.8 5336 chr2R 7608340 intron CG1358 - chr2R 7611008 intron CG1358 - chr2R 7613676 intron CG1358 - chr2R_12_7610001 chr2R_7610001 RAL-849 1448 chr2R 7623769 7623836 chr2R 7624006 7624073 23 237 24.0 21.5 22.8 1.0 304 chr2R 7623769 intron CG43340 + chr2R 7623921 intron CG43340 + chr2R 7624073 intron CG43340 + chr2R_23_7620001 chr2R_7620001 RAL-849 1449 chr2R 7691963 7692035 chr2R 7692094 7692166 22 131 7.0 10.5 8.8 2.2 203 chr2R 7691963 intron CG1399 - chr2R 7692064 intron CG1399 - chr2R 7692166 intron CG1399 - chr2R_22_7690001 chr2R_7690001 RAL-849 1450 chr2R 7694545 7694609 chr2R 7694679 7694743 23 132 19.0 20.0 19.5 1.1 198 chr2R 7694545 intron CG1399 - chr2R 7694644 intron CG1399 - chr2R 7694743 intron CG1399 - chr2R_23_7690001 chr2R_7690001 RAL-849 1451 chr2R 7708301 7708377 chr2R 7708449 7708525 19 148 14.0 10.5 12.2 1.4 224 chr2R 7708301 exon tor - chr2R 7708413 intron tor - chr2R 7708525 exon tor - chr2R_19_7705001 chr2R_7705001 RAL-849 1452 chr2R 7714043 7714110 chr2R 7714169 7714243 25 129 21.0 20.5 20.8 1.1 200 chr2R 7714043 exon CG1942 + chr2R 7714143 3` UTR CG1942 + chr2R 7714243 intergenic CG1942 + chr2R_25_7710001 chr2R_7710001 RAL-849 1453 chr2R 7737861 7737905 chr2R 7737990 7738034 13 129 29.0 31.0 30.0 0.4 173 chr2R 7737861 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738034 intergenic not near genes chr2R_13_7735001 chr2R_7735001 RAL-849 1454 chr2R 7743442 7743510 chr2R 7743568 7743639 9 129 19.5 14.5 17.0 0.5 197 chr2R 7743442 intron,intron CG30497 -,CG45093 - chr2R 7743540 intron,intron CG30497 -,CG45093 - chr2R 7743639 intron,intron CG30497 -,CG45093 - chr2R_9_7740001 chr2R_7740001 RAL-849 1455 chr2R 7787057 7787106 chr2R 7787189 7787233 8 131 18.0 18.5 18.2 0.4 176 chr2R 7787057 intron CanB2 + chr2R 7787145 intron CanB2 + chr2R 7787233 exon CanB2 + chr2R_8_7785001 chr2R_7785001 RAL-849 1456 chr2R 7815630 7815691 chr2R 7822149 7822209 Burdock 17 6518 3.5 12.0 7.8 1.9 6579 chr2R 7815630 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822209 3` UTR cathD - chr2R_17_7815001 chr2R_7815001 RAL-849 1457 chr2R 7861901 7861944 chr2R 7862148 7862191 8 247 17.5 23.0 20.2 0.4 290 chr2R 7861901 intron Dgk - chr2R 7862046 intron Dgk - chr2R 7862191 intron Dgk - chr2R_8_7860001 chr2R_7860001 RAL-849 1458 chr2R 7862213 7862250 chr2R 7867376 7867385 flea 9 5153 14.0 12.5 13.2 0.6 5172 chr2R 7862213 intron Dgk - chr2R 7864799 intron Dgk - chr2R 7867385 intron Dgk - chr2R_9_7860001 chr2R_7860001 RAL-849 1459 chr2R 7869147 7869178 chr2R 7873983 7874014 Doc 5 4836 17.0 7.5 12.2 0.4 4867 chr2R 7869147 intron Dgk - chr2R 7871580 intron Dgk - chr2R 7874014 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-849 1460 chr2R 7869179 7869205 chr2R 7873980 7874042 Doc 8 4828 11.5 7.0 9.2 0.8 4863 chr2R 7869179 intron Dgk - chr2R 7871610 intron Dgk - chr2R 7874042 intron Dgk - chr2R_8_7870001 chr2R_7870001 RAL-849 1461 chr2R 7873981 7874039 chr2R 7874128 7874149 10 142 20.0 27.0 23.5 0.4 168 chr2R 7873981 intron Dgk - chr2R 7874065 intron Dgk - chr2R 7874149 intron Dgk - chr2R_10_7870001 chr2R_7870001 RAL-849 1462 chr2R 7884153 7884220 chr2R 7884287 7884351 17 131 22.5 17.0 19.8 0.8 198 chr2R 7884153 intron Dgk - chr2R 7884252 intron Dgk - chr2R 7884351 intron Dgk - chr2R_17_7880001 chr2R_7880001 RAL-849 1463 chr2R 7897136 7897148 chr2R 7897275 7897287 10 138 7.5 31.0 19.2 0.5 151 chr2R 7897136 intron CG30377 + chr2R 7897212 intron CG30377 + chr2R 7897287 intron CG30377 + chr2R_10_7895001 chr2R_7895001 RAL-849 1464 chr2R 7926883 7926939 chr2R 7927009 7927065 5 126 10.5 12.0 11.2 0.4 182 chr2R 7926883 intron CG8791 + chr2R 7926974 intron CG8791 + chr2R 7927065 intron CG8791 + chr2R_5_7925001 chr2R_7925001 RAL-849 1465 chr2R 7952107 7952160 chr2R 7952416 7952479 4 318 11.5 25.5 18.5 0.2 372 chr2R 7952107 intron CG14764 - chr2R 7952293 intron CG14764 - chr2R 7952479 intron CG14764 - chr2R_4_7950001 chr2R_7950001 RAL-849 1466 chr2R 7968204 7968226 chr2R 7968365 7968387 8 161 26.0 28.0 27.0 0.3 183 chr2R 7968204 intron,3` UTR nito +,CG8726 - chr2R 7968296 intron,3` UTR nito +,CG8726 - chr2R 7968387 intron,3` UTR nito +,CG8726 - chr2R_8_7965001 chr2R_7965001 RAL-849 1467 chr2R 7983297 7983335 chr2R 7983383 7983446 5 115 25.0 25.0 25.0 0.2 149 chr2R 7983297 intron ACC - chr2R 7983372 intron ACC - chr2R 7983446 intron ACC - chr2R_5_7980001 chr2R_7980001 RAL-849 1468 chr2R 8015627 8015639 chr2R 8017680 8017712 6 2067 19.0 2.0 10.5 0.5 2085 chr2R 8015627 intergenic mir-4981 + chr2R 8016670 intergenic not near genes chr2R 8017712 intergenic not near genes chr2R_6_8015001 chr2R_8015001 RAL-849 1469 chr2R 8015657 8015670 chr2R 8017678 8017743 5 2061 13.0 1.5 7.2 0.6 2086 chr2R 8015657 intergenic mir-4981 + chr2R 8016700 intergenic not near genes chr2R 8017743 intergenic not near genes chr2R_5_8015001 chr2R_8015001 RAL-849 1470 chr2R 8018075 8018140 chr2R 8018218 8018283 10 143 16.0 17.5 16.8 0.6 208 chr2R 8018075 intergenic not near genes chr2R 8018179 intergenic not near genes chr2R 8018283 intergenic not near genes chr2R_10_8015001 chr2R_8015001 RAL-849 1471 chr2R 8026762 8026837 chr2R 8026888 8026963 13 126 4.5 4.5 4.5 2.4 201 chr2R 8026762 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026963 intergenic CR45267 + chr2R_13_8025001 chr2R_8025001 RAL-849 1472 chr2R 8036214 8036282 chr2R 8036344 8036393 9 123 30.5 30.0 30.2 0.3 179 chr2R 8036214 intron Optix + chr2R 8036304 intron Optix + chr2R 8036393 intron Optix + chr2R_9_8035001 chr2R_8035001 RAL-849 1473 chr2R 8067021 8067090 chr2R 8067155 8067224 27 133 4.5 11.5 8.0 3.0 203 chr2R 8067021 intron CG17977 - chr2R 8067122 intron CG17977 - chr2R 8067224 exon CG17977 - chr2R_27_8065001 chr2R_8065001 RAL-849 1474 chr2R 8076644 8076704 chr2R 8076774 8076834 15 130 29.0 27.0 28.0 0.5 190 chr2R 8076644 intron lig + chr2R 8076739 intron lig + chr2R 8076834 intron lig + chr2R_15_8075001 chr2R_8075001 RAL-849 1475 chr2R 8089204 8089279 chr2R 8089340 8089415 16 136 6.5 11.0 8.8 1.6 211 chr2R 8089204 exon sut2 + chr2R 8089310 intergenic sut2 +,sut3 + chr2R 8089415 intergenic sut3 +,sut2 + chr2R_16_8085001 chr2R_8085001 RAL-849 1476 chr2R 8175569 8175628 chr2R 8175705 8175764 12 136 16.0 19.0 17.5 0.6 195 chr2R 8175569 intron LRP1 + chr2R 8175666 intron LRP1 + chr2R 8175764 intron LRP1 + chr2R_12_8175001 chr2R_8175001 RAL-849 1477 chr2R 8203716 8203752 chr2R 8203858 8203868 10 139 7.0 7.0 7.0 1.2 152 chr2R 8203716 intron LRP1 + chr2R 8203792 intron LRP1 + chr2R 8203868 intron LRP1 + chr2R_10_8200001 chr2R_8200001 RAL-849 1478 chr2R 8209559 8209613 chr2R 8209686 8209740 11 116 20.5 16.5 18.5 0.6 181 chr2R 8209559 exon LRP1 + chr2R 8209650 intron LRP1 + chr2R 8209740 exon LRP1 + chr2R_11_8205001 chr2R_8205001 RAL-849 1479 chr2R 8218497 8218565 chr2R 8218702 8218770 18 205 19.0 21.5 20.2 0.8 273 chr2R 8218497 exon LRP1 + chr2R 8218634 intron LRP1 + chr2R 8218770 intron LRP1 + chr2R_18_8215001 chr2R_8215001 RAL-849 1480 chr2R 8231653 8231728 chr2R 8231782 8231857 13 128 13.0 15.0 14.0 0.9 204 chr2R 8231653 exon dpn - chr2R 8231755 intron dpn - chr2R 8231857 intron dpn - chr2R_13_8230001 chr2R_8230001 RAL-849 1481 chr2R 8235986 8236024 chr2R 8236117 8236154 12 130 11.0 2.0 6.5 1.6 168 chr2R 8235986 intergenic not near genes chr2R 8236070 intergenic not near genes chr2R 8236154 intergenic not near genes chr2R_12_8235001 chr2R_8235001 RAL-849 1482 chr2R 8259536 8259588 chr2R 8259665 8259718 8 128 16.0 17.5 16.8 0.4 182 chr2R 8259536 exon CG30369 + chr2R 8259627 exon CG30369 + chr2R 8259718 3` UTR CG30369 + chr2R_8_8255001 chr2R_8255001 RAL-849 1483 chr2R 8330840 8330880 chr2R 8331376 8331416 roo 15 536 12.5 18.5 15.5 0.9 576 chr2R 8330840 intron pdm3 + chr2R 8331128 intron pdm3 + chr2R 8331416 intron pdm3 + chr2R_15_8330001 chr2R_8330001 RAL-849 1484 chr2R 8368147 8368178 chr2R 8368277 8368308 15 128 9.5 11.0 10.2 1.3 161 chr2R 8368147 intron pdm3 + chr2R 8368228 intron pdm3 + chr2R 8368308 intron pdm3 + chr2R_15_8365001 chr2R_8365001 RAL-849 1485 chr2R 8368184 8368214 chr2R 8368264 8368344 10 123 6.0 9.5 7.8 1.1 160 chr2R 8368184 intron pdm3 + chr2R 8368264 intron pdm3 + chr2R 8368344 intron,3` UTR pdm3 +,CG2127 - chr2R_10_8365001 chr2R_8365001 RAL-849 1486 chr2R 8398173 8398237 chr2R 8403004 8403050 Doc 22 4828 5.5 10.5 8.0 2.4 4877 chr2R 8398173 intron CG2121 - chr2R 8400612 intron CG2121 - chr2R 8403050 intron CG2121 - chr2R_22_8400001 chr2R_8400001 RAL-849 1487 chr2R 8416267 8416309 chr2R 8417141 8417155 I-element 7 870 7.0 4.0 5.5 1.1 888 chr2R 8416267 intergenic not near genes chr2R 8416711 intergenic CG43296 - chr2R 8417155 intergenic CG43296 - chr2R_7_8415001 chr2R_8415001 RAL-849 1488 chr2R 8483925 8483987 chr2R 8484051 8484113 8 126 18.0 18.5 18.2 0.4 188 chr2R 8483925 intron mtt - chr2R 8484019 intron mtt - chr2R 8484113 intron mtt - chr2R_8_8480001 chr2R_8480001 RAL-849 1489 chr2R 8488870 8488936 chr2R 8489005 8489071 9 132 21.0 22.5 21.8 0.4 201 chr2R 8488870 intron mtt - chr2R 8488970 intron mtt - chr2R 8489071 intron mtt - chr2R_9_8485001 chr2R_8485001 RAL-849 1490 chr2R 8489686 8489969 chr2R 8489815 8490096 19 124 11.5 18.5 15.0 1.2 410 chr2R 8489686 intron mtt - chr2R 8489891 intron mtt - chr2R 8490096 intron mtt - chr2R_19_8485001 chr2R_8485001 RAL-849 1491 chr2R 8490568 8490578 chr2R 8492338 8492350 Rt1c 7 1772 14.5 18.5 16.5 0.4 1782 chr2R 8490568 intron mtt - chr2R 8491459 intron mtt - chr2R 8492350 intron mtt - chr2R_7_8490001 chr2R_8490001 RAL-849 1492 chr2R 8508721 8508782 chr2R 8508854 8508875 13 124 13.5 20.5 17.0 0.7 154 chr2R 8508721 intron mtt - chr2R 8508798 intron mtt - chr2R 8508875 intron mtt - chr2R_13_8505001 chr2R_8505001 RAL-849 1493 chr2R 8515606 8515650 chr2R 8515736 8515780 9 130 14.0 17.0 15.5 0.5 174 chr2R 8515606 intron mtt - chr2R 8515693 intron mtt - chr2R 8515780 intron mtt - chr2R_9_8515001 chr2R_8515001 RAL-849 1494 chr2R 8522137 8522199 chr2R 8522276 8522310 16 118 17.0 15.0 16.0 0.9 173 chr2R 8522137 5` UTR mtt - chr2R 8522224 5` UTR mtt - chr2R 8522310 5` UTR mtt - chr2R_16_8520001 chr2R_8520001 RAL-849 1495 chr2R 8538832 8538891 chr2R 8538959 8539023 18 130 19.5 22.5 21.0 0.8 191 chr2R 8538832 intergenic not near genes chr2R 8538928 intergenic not near genes chr2R 8539023 intergenic not near genes chr2R_18_8535001 chr2R_8535001 RAL-849 1496 chr2R 8565993 8566046 chr2R 8566995 8567048 1360 9 1002 24.5 26.0 25.2 0.3 1055 chr2R 8565993 5` UTR Cyp6a14 - chr2R 8566520 5` UTR Cyp6a14 - chr2R 8567048 5` UTR Cyp6a14 - chr2R_9_8565001 chr2R_8565001 RAL-849 1497 chr2R 8569142 8569181 chr2R 8569505 8569544 9 363 23.5 7.5 15.5 0.5 402 chr2R 8569142 intergenic not near genes chr2R 8569343 intergenic not near genes chr2R 8569544 intergenic not near genes chr2R_9_8565001 chr2R_8565001 RAL-849 1498 chr2R 8587972 8588035 chr2R 8588106 8588169 21 132 27.0 28.0 27.5 0.7 197 chr2R 8587972 intergenic not near genes chr2R 8588070 intergenic not near genes chr2R 8588169 intergenic not near genes chr2R_21_8585001 chr2R_8585001 RAL-849 1499 chr2R 8615734 8615803 chr2R 8615897 8615904 33 159 8.5 11.5 10.0 3.0 170 chr2R 8615734 intron Cirl + chr2R 8615819 intron Cirl + chr2R 8615904 5` UTR Cirl + chr2R_33_8615001 chr2R_8615001 RAL-849 1500 chr2R 8658215 8658250 chr2R 8658316 8658341 6 110 0.0 5.5 2.8 1.6 126 chr2R 8658215 intron ptc + chr2R 8658278 intron ptc + chr2R 8658341 intron ptc + chr2R_6_8655001 chr2R_8655001 RAL-849 1501 chr2R 8691077 8691150 chr2R 8691596 8691669 24 517 7.0 6.5 6.8 3.1 592 chr2R 8691077 intergenic Jon44E + chr2R 8691373 intergenic Jon44E + chr2R 8691669 exon Jon44E + chr2R_24_8690001 chr2R_8690001 RAL-849 1502 chr2R 8722723 8722732 chr2R 8723014 8723023 pogo 6 291 24.5 11.5 18.0 0.3 300 chr2R 8722723 intron CG14767 - chr2R 8722873 intron CG14767 - chr2R 8723023 intron CG14767 - chr2R_6_8720001 chr2R_8720001 RAL-849 1503 chr2R 8722733 8722784 chr2R 8723011 8723050 pogo 27 285 12.0 11.0 11.5 2.2 317 chr2R 8722733 intron CG14767 - chr2R 8722892 intron CG14767 - chr2R 8723050 intron CG14767 - chr2R_27_8720001 chr2R_8720001 RAL-849 1504 chr2R 8729861 8729922 chr2R 8729992 8730043 29 130 5.5 8.0 6.8 3.7 182 chr2R 8729861 exon stmA - chr2R 8729952 intron stmA - chr2R 8730043 intron stmA - chr2R_29_8725001 chr2R_8725001 RAL-849 1505 chr2R 8777873 8777946 chr2R 8784127 8784200 diver 25 6254 4.5 7.0 5.8 3.7 6327 chr2R 8777873 intergenic not near genes chr2R 8781036 intergenic not near genes chr2R 8784200 intergenic not near genes chr2R_25_8780001 chr2R_8780001 RAL-849 1506 chr2R 8806298 8806352 chr2R 8806527 8806601 17 244 8.5 7.5 8.0 1.9 303 chr2R 8806298 intron sns + chr2R 8806450 intron sns + chr2R 8806601 intron sns + chr2R_17_8805001 chr2R_8805001 RAL-849 1507 chr2R 8846134 8846207 chr2R 8846260 8846320 5 113 8.5 8.0 8.2 0.5 186 chr2R 8846134 intron sns + chr2R 8846227 intron sns + chr2R 8846320 intron sns + chr2R_5_8845001 chr2R_8845001 RAL-849 1508 chr2R 8849188 8849255 chr2R 8849316 8849383 25 128 6.5 8.0 7.2 3.0 195 chr2R 8849188 intron sns + chr2R 8849286 intron sns + chr2R 8849383 intron sns + chr2R_25_8845001 chr2R_8845001 RAL-849 1509 chr2R 8849956 8849998 chr2R 8850170 8850206 17 211 14.0 11.5 12.8 1.2 250 chr2R 8849956 intron sns + chr2R 8850081 intron sns + chr2R 8850206 intron sns + chr2R_17_8850001 chr2R_8850001 RAL-849 1510 chr2R 8926904 8926943 chr2R 8927047 8927086 7 143 27.5 9.5 18.5 0.4 182 chr2R 8926904 intergenic CG8237 +,CG8235 - chr2R 8926995 intergenic CG8235 -,CG8237 + chr2R 8927086 exon CG8235 - chr2R_7_8925001 chr2R_8925001 RAL-849 1511 chr2R 8926945 8926975 chr2R 8927046 8927118 16 136 14.5 9.5 12.0 1.2 173 chr2R 8926945 intergenic CG8237 +,CG8235 - chr2R 8927032 3` UTR CG8235 - chr2R 8927118 exon CG8235 - chr2R_16_8925001 chr2R_8925001 RAL-849 1512 chr2R 9052657 9052735 chr2R 9052786 9052844 22 127 5.5 6.5 6.0 3.1 187 chr2R 9052657 intron CG13743 - chr2R 9052750 intron CG13743 - chr2R 9052844 intron CG13743 - chr2R_22_9050001 chr2R_9050001 RAL-849 1513 chr2R 9075857 9075868 chr2R 9076042 9076053 6 185 19.0 3.5 11.2 0.5 196 chr2R 9075857 intron ana + chr2R 9075955 intron ana + chr2R 9076053 intron ana + chr2R_6_9075001 chr2R_9075001 RAL-849 1514 chr2R 9075870 9075926 chr2R 9076040 9076111 17 184 8.5 3.0 5.8 2.5 241 chr2R 9075870 intron ana + chr2R 9075990 intron ana + chr2R 9076111 intron ana + chr2R_17_9075001 chr2R_9075001 RAL-849 1515 chr2R 9151265 9151322 chr2R 9157785 9157842 Burdock 21 6520 14.5 14.5 14.5 1.4 6577 chr2R 9151265 exon CG30345 + chr2R 9154554 intergenic not near genes chr2R 9157842 intergenic CG8008 - chr2R_21_9150001 chr2R_9150001 RAL-849 1516 chr2R 9190275 9190352 chr2R 9190680 9190756 29 403 5.0 10.0 7.5 3.4 481 chr2R 9190275 intron,intron CG45085 -,CG8026 - chr2R 9190516 intron,intron CG45085 -,CG8026 - chr2R 9190756 intron,intron CG45085 -,CG8026 - chr2R_29_9190001 chr2R_9190001 RAL-849 1517 chr2R 9212653 9212714 chr2R 9213189 9213230 roo 14 527 5.0 4.5 4.8 2.4 577 chr2R 9212653 intergenic CR45309 + chr2R 9212942 intergenic CR45309 + chr2R 9213230 5` UTR CR45309 + chr2R_14_9210001 chr2R_9210001 RAL-849 1518 chr2R 9213563 9213646 chr2R 9213704 9213780 27 136 1.0 3.5 2.2 8.4 217 chr2R 9213563 5` UTR CR45309 + chr2R 9213672 5` UTR CR45309 + chr2R 9213780 intergenic CR45309 +,CR44451 + chr2R_27_9210001 chr2R_9210001 RAL-849 1519 chr2R 9236559 9236584 chr2R 9236696 9236721 13 137 11.5 4.0 7.8 1.5 162 chr2R 9236559 intron hig - chr2R 9236640 intron hig - chr2R 9236721 intron hig - chr2R_13_9235001 chr2R_9235001 RAL-849 1520 chr2R 9236603 9236613 chr2R 9236740 9236750 6 137 6.0 10.0 8.0 0.7 147 chr2R 9236603 intron hig - chr2R 9236676 intron hig - chr2R 9236750 intron hig - chr2R_6_9235001 chr2R_9235001 RAL-849 1521 chr2R 9368078 9368111 chr2R 9368204 9368237 16 116 14.5 1.0 7.8 1.8 159 chr2R 9368078 intron CG13954 - chr2R 9368158 intron CG13954 - chr2R 9368237 intron CG13954 - chr2R_16_9365001 chr2R_9365001 RAL-849 1522 chr2R 9378064 9378139 chr2R 9378196 9378271 33 131 13.5 8.5 11.0 2.8 207 chr2R 9378064 intron CG13954 - chr2R 9378168 intron CG13954 - chr2R 9378271 intron CG13954 - chr2R_33_9375001 chr2R_9375001 RAL-849 1523 chr2R 9408179 9408252 chr2R 9408312 9408385 24 133 7.5 8.5 8.0 2.7 206 chr2R 9408179 intron wun - chr2R 9408282 intron wun - chr2R 9408385 intron wun - chr2R_24_9405001 chr2R_9405001 RAL-849 1524 chr2R 9480037 9480075 chr2R 9490618 9490656 roo 7 10581 10.5 4.0 7.2 0.9 10619 chr2R 9480037 intergenic not near genes chr2R 9485346 intergenic not near genes chr2R 9490656 intergenic not near genes chr2R_7_9485001 chr2R_9485001 RAL-849 1525 chr2R 9499913 9499985 chr2R 9500051 9500123 33 136 6.5 7.0 6.8 4.2 210 chr2R 9499913 intron Wnt2 + chr2R 9500018 intron Wnt2 + chr2R 9500123 intron Wnt2 + chr2R_33_9500001 chr2R_9500001 RAL-849 1526 chr2R 9509410 9509455 chr2R 9509528 9509587 9 130 9.5 11.5 10.5 0.8 177 chr2R 9509410 intron brp + chr2R 9509498 intron brp + chr2R 9509587 intron brp + chr2R_9_9505001 chr2R_9505001 RAL-849 1527 chr2R 9510614 9510697 chr2R 9510780 9510858 21 165 5.5 7.0 6.2 2.9 244 chr2R 9510614 exon brp + chr2R 9510736 intron brp + chr2R 9510858 exon brp + chr2R_21_9510001 chr2R_9510001 RAL-849 1528 chr2R 9561791 9561835 chr2R 9561928 9561973 7 136 6.5 6.5 6.5 0.9 182 chr2R 9561791 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561973 3` UTR,intron CR45281 -,CG1809 + chr2R_7_9560001 chr2R_9560001 RAL-849 1529 chr2R 9619574 9619596 chr2R 9619754 9619775 4 178 9.5 23.5 16.5 0.2 201 chr2R 9619574 intron Mmp2 - chr2R 9619674 intron Mmp2 - chr2R 9619775 intron Mmp2 - chr2R_4_9615001 chr2R_9615001 RAL-849 1530 chr2R 9669090 9669161 chr2R 9669241 9669312 29 150 7.5 7.5 7.5 3.4 222 chr2R 9669090 intron Mmp2 - chr2R 9669201 intron Mmp2 - chr2R 9669312 intron Mmp2 - chr2R_29_9665001 chr2R_9665001 RAL-849 1531 chr2R 9672004 9672080 chr2R 9672160 9672234 26 156 7.0 7.5 7.2 3.2 230 chr2R 9672004 intron Mmp2 - chr2R 9672119 intron Mmp2 - chr2R 9672234 intron Mmp2 - chr2R_26_9670001 chr2R_9670001 RAL-849 1532 chr2R 9726574 9726630 chr2R 9734175 9734231 17.6 11 7600 8.5 10.5 9.5 1.0 7657 chr2R 9726574 intron sqa - chr2R 9730402 intron sqa - chr2R 9734231 intron sqa - chr2R_11_9730001 chr2R_9730001 RAL-849 1533 chr2R 9761265 9761296 chr2R 9761391 9761422 10 126 4.0 12.0 8.0 1.1 157 chr2R 9761265 intron trpl + chr2R 9761344 intron trpl + chr2R 9761422 exon trpl + chr2R_10_9760001 chr2R_9760001 RAL-849 1534 chr2R 9776646 9776662 chr2R 9776776 9776793 8 130 20.0 6.0 13.0 0.6 147 chr2R 9776646 intron CG1688 - chr2R 9776720 intron CG1688 - chr2R 9776793 intron CG1688 - chr2R_8_9775001 chr2R_9775001 RAL-849 1535 chr2R 9776666 9776708 chr2R 9776767 9776824 15 121 11.0 6.0 8.5 1.6 158 chr2R 9776666 intron CG1688 - chr2R 9776745 intron CG1688 - chr2R 9776824 intron CG1688 - chr2R_15_9775001 chr2R_9775001 RAL-849 1536 chr2R 9780788 9780853 chr2R 9781081 9781146 24 292 4.0 8.5 6.2 3.3 358 chr2R 9780788 intron CG1688 - chr2R 9780967 intron CG1688 - chr2R 9781146 intron CG1688 - chr2R_24_9780001 chr2R_9780001 RAL-849 1537 chr2R 9787966 9788036 chr2R 9788405 9788475 33 439 7.5 9.0 8.2 3.6 509 chr2R 9787966 intron CG1688 - chr2R 9788220 intron CG1688 - chr2R 9788475 intron CG1688 - chr2R_33_9785001 chr2R_9785001 RAL-849 1538 chr2R 9805403 9805437 chr2R 9805534 9805568 6 131 5.5 10.5 8.0 0.7 165 chr2R 9805403 intron CG1688 - chr2R 9805486 intron CG1688 - chr2R 9805568 intron CG1688 - chr2R_6_9805001 chr2R_9805001 RAL-849 1539 chr2R 9807392 9807460 chr2R 9807585 9807645 10 192 0.0 10.5 5.2 1.6 253 chr2R 9807392 intergenic not near genes chr2R 9807518 intergenic not near genes chr2R 9807645 intergenic not near genes chr2R_10_9805001 chr2R_9805001 RAL-849 1540 chr2R 9847734 9847799 chr2R 9850331 9850396 30 2599 54.5 69.5 62.0 0.5 2662 chr2R 9847734 5` UTR Prosalpha7 - chr2R 9849065 exon CG1671 + chr2R 9850396 exon CG1671 + chr2R_30_9845001 chr2R_9845001 RAL-849 1541 chr2R 9870999 9871067 chr2R 9871534 9871603 roo 23 534 10.0 11.0 10.5 2.0 604 chr2R 9870999 intron cbx - chr2R 9871301 intron cbx - chr2R 9871603 intron,5` UTR cbx -,CG18446 + chr2R_23_9870001 chr2R_9870001 RAL-849 1542 chr2R 9940707 9940774 chr2R 9940839 9940906 33 129 8.0 13.0 10.5 2.9 199 chr2R 9940707 intron Mef2 - chr2R 9940806 5` UTR Mef2 - chr2R 9940906 5` UTR Mef2 - chr2R_33_9940001 chr2R_9940001 RAL-849 1543 chr2R 9945395 9945461 chr2R 9945641 9945707 BS 17 244 5.0 9.0 7.0 2.1 312 chr2R 9945395 intron Mef2 - chr2R 9945551 intron Mef2 - chr2R 9945707 intron Mef2 - chr2R_17_9945001 chr2R_9945001 RAL-849 1544 chr2R 9998022 9998092 chr2R 9998165 9998236 12 144 3.5 4.0 3.8 2.5 214 chr2R 9998022 intron Pka-R2 - chr2R 9998129 intron Pka-R2 - chr2R 9998236 intron Pka-R2 - chr2R_12_9995001 chr2R_9995001 RAL-849 1545 chr2R 10005510 10005581 chr2R 10005657 10005728 24 147 3.5 4.0 3.8 5.0 218 chr2R 10005510 intron Pka-R2 - chr2R 10005619 intron Pka-R2 - chr2R 10005728 intron Pka-R2 - chr2R_24_10005001 chr2R_10005001 RAL-849 1546 chr2R 10005813 10005875 chr2R 10007021 10007085 1360 34 1208 12.0 11.5 11.8 2.7 1272 chr2R 10005813 intron Pka-R2 - chr2R 10006449 intron Pka-R2 - chr2R 10007085 intron Pka-R2 - chr2R_34_10005001 chr2R_10005001 RAL-849 1547 chr2R 10047794 10047823 chr2R 10047927 10047956 8 133 7.0 9.0 8.0 0.9 162 chr2R 10047794 intron oys - chr2R 10047875 intron oys - chr2R 10047956 intron oys - chr2R_8_10045001 chr2R_10045001 RAL-849 1548 chr2R 10122690 10122750 chr2R 10122950 10123010 33 260 9.5 6.0 7.8 3.7 320 chr2R 10122690 intergenic Ccs - chr2R 10122850 intergenic Ccs - chr2R 10123010 intergenic Ccs - chr2R_33_10120001 chr2R_10120001 RAL-849 1549 chr2R 10133451 10133524 chr2R 10133579 10133652 24 128 10.0 8.5 9.2 2.4 201 chr2R 10133451 intron gem + chr2R 10133552 intron gem + chr2R 10133652 intron gem + chr2R_24_10130001 chr2R_10130001 RAL-849 1550 chr2R 10150178 10150238 chr2R 10150306 10150365 10 128 10.5 6.0 8.2 1.1 187 chr2R 10150178 intron KCNQ - chr2R 10150272 intron KCNQ - chr2R 10150365 intron KCNQ - chr2R_10_10150001 chr2R_10150001 RAL-849 1551 chr2R 10172584 10172666 chr2R 10172746 10172840 26 168 5.0 0.0 2.5 7.4 256 chr2R 10172584 intron KCNQ - chr2R 10172712 intron KCNQ - chr2R 10172840 intron KCNQ - chr2R_26_10170001 chr2R_10170001 RAL-849 1552 chr2R 10176840 10176911 chr2R 10186057 10186128 roo 23 9217 8.0 5.5 6.8 2.9 9288 chr2R 10176840 intron KCNQ - chr2R 10181484 intron KCNQ - chr2R 10186128 intron KCNQ - chr2R_23_10180001 chr2R_10180001 RAL-849 1553 chr2R 10190407 10190415 chr2R 10190527 10190539 6 127 18.0 8.0 13.0 0.4 132 chr2R 10190407 intron KCNQ - chr2R 10190473 intron KCNQ - chr2R 10190539 intron KCNQ - chr2R_6_10190001 chr2R_10190001 RAL-849 1554 chr2R 10234936 10234999 chr2R 10235075 10235128 6 136 5.0 0.0 2.5 1.7 192 chr2R 10234936 intron Hr46 - chr2R 10235032 intron Hr46 - chr2R 10235128 intron Hr46 - chr2R_6_10235001 chr2R_10235001 RAL-849 1555 chr2R 10261879 10261915 chr2R 10262134 10262140 15 253 0.5 3.0 1.8 5.4 261 chr2R 10261879 3` UTR CR30009 - chr2R 10262010 3` UTR CR30009 - chr2R 10262140 3` UTR CR30009 - chr2R_15_10260001 chr2R_10260001 RAL-849 1556 chr2R 10266475 10266531 chr2R 10266586 10266622 23 125 6.5 4.5 5.5 3.5 147 chr2R 10266475 intron CG12910 + chr2R 10266548 intron CG12910 + chr2R 10266622 intron CG12910 + chr2R_23_10265001 chr2R_10265001 RAL-849 1557 chr2R 10274783 10274812 chr2R 10274909 10274933 8 125 12.5 0.0 6.2 1.1 150 chr2R 10274783 intron CAP + chr2R 10274858 intron CAP + chr2R 10274933 intron CAP + chr2R_8_10270001 chr2R_10270001 RAL-849 1558 chr2R 10290076 10290139 chr2R 10290207 10290270 14 131 7.0 10.5 8.8 1.4 194 chr2R 10290076 intron CAP + chr2R 10290173 intron CAP + chr2R 10290270 intron CAP + chr2R_14_10290001 chr2R_10290001 RAL-849 1559 chr2R 10300605 10300676 chr2R 10300742 10300822 12 144 0.0 0.0 0.0 12.0 217 chr2R 10300605 intron CAP + chr2R 10300714 intron CAP + chr2R 10300822 intron CAP + chr2R_12_10300001 chr2R_10300001 RAL-849 1560 chr2R 10303490 10303557 chr2R 10303640 10303707 31 150 9.0 10.0 9.5 3.0 217 chr2R 10303490 intron CAP + chr2R 10303598 intron CAP + chr2R 10303707 intron CAP + chr2R_31_10300001 chr2R_10300001 RAL-849 1561 chr2R 10313288 10313342 chr2R 10313426 10313480 29 138 0.0 2.5 1.2 13.2 192 chr2R 10313288 intergenic not near genes chr2R 10313384 intergenic not near genes chr2R 10313480 intergenic Ndg + chr2R_29_10310001 chr2R_10310001 RAL-849 1562 chr2R 10322056 10322076 chr2R 10322188 10322208 8 132 6.0 11.0 8.5 0.8 152 chr2R 10322056 3` UTR Ndg + chr2R 10322132 intergenic Ndg + chr2R 10322208 intergenic Ndg + chr2R_8_10320001 chr2R_10320001 RAL-849 1563 chr2R 10352626 10352690 chr2R 10352753 10352817 27 126 6.5 8.5 7.5 3.2 191 chr2R 10352626 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352722 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352817 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_27_10350001 chr2R_10350001 RAL-849 1564 chr2R 10387983 10387997 chr2R 10388125 10388144 5 146 0.0 13.5 6.8 0.6 161 chr2R 10387983 intron CG42732 - chr2R 10388064 intron CG42732 - chr2R 10388144 intron CG42732 - chr2R_5_10385001 chr2R_10385001 RAL-849 1565 chr2R 10409015 10409085 chr2R 10409142 10409211 29 127 0.0 8.5 4.2 5.6 196 chr2R 10409015 intron CG42732 - chr2R 10409113 intron CG42732 - chr2R 10409211 intron,exon CG42732 -,CG33477 - chr2R_29_10405001 chr2R_10405001 RAL-849 1566 chr2R 10411758 10411832 chr2R 10411890 10411964 20 132 8.5 8.5 8.5 2.1 206 chr2R 10411758 intron CG42732 - chr2R 10411861 intron CG42732 - chr2R 10411964 intron CG42732 - chr2R_20_10410001 chr2R_10410001 RAL-849 1567 chr2R 10447968 10448034 chr2R 10448109 10448175 36 140 11.0 14.5 12.8 2.6 207 chr2R 10447968 intron Galphao + chr2R 10448072 intron Galphao + chr2R 10448175 intron Galphao + chr2R_36_10445001 chr2R_10445001 RAL-849 1568 chr2R 10454058 10454127 chr2R 10454184 10454219 31 122 13.0 10.0 11.5 2.5 161 chr2R 10454058 intron,intron Galphao +,Cyp49a1 - chr2R 10454138 intron,intron Galphao +,Cyp49a1 - chr2R 10454219 intron,intron Galphao +,Cyp49a1 - chr2R_31_10450001 chr2R_10450001 RAL-849 1569 chr2R 10456133 10456200 chr2R 10456259 10456330 12 127 4.5 0.0 2.2 3.8 197 chr2R 10456133 intron,5` UTR Galphao +,Cyp49a1 - chr2R 10456232 intron,intron Galphao +,Cyp49a1 - chr2R 10456330 intron,intron Galphao +,Cyp49a1 - chr2R_12_10455001 chr2R_10455001 RAL-849 1570 chr2R 10468978 10469051 chr2R 10469154 10469227 38 175 6.5 8.0 7.2 4.6 249 chr2R 10468978 intron CG11777 + chr2R 10469102 intron CG11777 + chr2R 10469227 exon CG11777 + chr2R_38_10465001 chr2R_10465001 RAL-849 1571 chr2R 10478745 10478789 chr2R 10478873 10478916 5 128 10.0 10.5 10.2 0.4 171 chr2R 10478745 5` UTR CR45134 + chr2R 10478830 intergenic CR45134 +,trsn -,whd - chr2R 10478916 intergenic trsn -,CR45134 +,whd - chr2R_5_10475001 chr2R_10475001 RAL-849 1572 chr2R 10509545 10509563 chr2R 10509682 10509689 4 134 13.0 0.0 6.5 0.5 144 chr2R 10509545 intron lola - chr2R 10509617 intron lola - chr2R 10509689 intron lola - chr2R_4_10505001 chr2R_10505001 RAL-849 1573 chr2R 10548095 10548136 chr2R 10548209 10548255 21 119 7.0 20.5 13.8 1.4 160 chr2R 10548095 intergenic not near genes chr2R 10548175 intergenic not near genes chr2R 10548255 intergenic not near genes chr2R_21_10545001 chr2R_10545001 RAL-849 1574 chr2R 10550596 10550663 chr2R 10550719 10550779 9 125 4.5 0.0 2.2 2.8 183 chr2R 10550596 intergenic not near genes chr2R 10550688 intergenic not near genes chr2R 10550779 intergenic not near genes chr2R_9_10550001 chr2R_10550001 RAL-849 1575 chr2R 10561106 10561170 chr2R 10561283 10561347 10 177 2.0 3.0 2.5 2.9 241 chr2R 10561106 intron psq + chr2R 10561226 intron psq + chr2R 10561347 intron psq + chr2R_10_10560001 chr2R_10560001 RAL-849 1576 chr2R 10563905 10563915 chr2R 10564146 10564156 5 241 0.0 12.0 6.0 0.7 251 chr2R 10563905 intron psq + chr2R 10564030 intron psq + chr2R 10564156 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-849 1577 chr2R 10622310 10622382 chr2R 10637125 10637132 mdg1 10 14808 3.5 2.0 2.8 2.6 14822 chr2R 10622310 intron CG11883 + chr2R 10629721 intron CG11883 + chr2R 10637132 intron CG11883 + chr2R_10_10625001 chr2R_10625001 RAL-849 1578 chr2R 10781347 10781424 chr2R 10781757 10781833 24 406 5.0 7.5 6.2 3.3 486 chr2R 10781347 intron CG33144 - chr2R 10781590 intron CG33144 - chr2R 10781833 intron CG33144 - chr2R_24_10780001 chr2R_10780001 RAL-849 1579 chr2R 10790102 10790169 chr2R 10790240 10790307 26 138 8.0 7.5 7.8 3.0 205 chr2R 10790102 intron CG33144 - chr2R 10790204 intron CG33144 - chr2R 10790307 intron CG33144 - chr2R_26_10790001 chr2R_10790001 RAL-849 1580 chr2R 10854370 10854424 chr2R 10854572 10854626 10 202 4.5 4.5 4.5 1.8 256 chr2R 10854370 intron,5` UTR CG30015 -,CR45136 + chr2R 10854498 intron CG30015 - chr2R 10854626 intron CG30015 - chr2R_10_10850001 chr2R_10850001 RAL-849 1581 chr2R 10859683 10859715 chr2R 10859809 10859841 7 126 4.0 11.0 7.5 0.8 158 chr2R 10859683 intron CG30015 - chr2R 10859762 intron,5` UTR CG30015 -,CR44302 + chr2R 10859841 intron,5` UTR CG30015 -,CR44302 + chr2R_7_10855001 chr2R_10855001 RAL-849 1582 chr2R 10902419 10902431 chr2R 10902611 10902623 6 192 15.5 9.5 12.5 0.4 204 chr2R 10902419 intergenic not near genes chr2R 10902521 intergenic not near genes chr2R 10902623 intergenic not near genes chr2R_6_10900001 chr2R_10900001 RAL-849 1583 chr2R 10913554 10913591 chr2R 10914212 10914247 10 656 14.0 7.5 10.8 0.8 693 chr2R 10913554 intergenic not near genes chr2R 10913900 intergenic not near genes chr2R 10914247 intergenic not near genes chr2R_10_10910001 chr2R_10910001 RAL-849 1584 chr2R 10948014 10948051 chr2R 10955598 10955652 17.6 22 7596 0.0 11.5 5.8 3.2 7638 chr2R 10948014 intergenic not near genes chr2R 10951833 intergenic not near genes chr2R 10955652 intergenic not near genes chr2R_22_10950001 chr2R_10950001 RAL-849 1585 chr2R 10959041 10959101 chr2R 10959170 10959230 7 128 0.0 4.5 2.2 2.2 189 chr2R 10959041 intergenic not near genes chr2R 10959136 intergenic not near genes chr2R 10959230 intergenic not near genes chr2R_7_10955001 chr2R_10955001 RAL-849 1586 chr2R 10979625 10979680 chr2R 10980133 10980198 297 12 512 7.0 4.0 5.5 1.8 573 chr2R 10979625 intergenic not near genes chr2R 10979912 intergenic not near genes chr2R 10980198 intergenic not near genes chr2R_12_10975001 chr2R_10975001 RAL-849 1587 chr2R 11009775 11009788 chr2R 11018999 11019012 roo 4 9224 13.0 7.5 10.2 0.4 9237 chr2R 11009775 intron luna - chr2R 11014394 intron luna - chr2R 11019012 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-849 1588 chr2R 11009792 11009845 chr2R 11018995 11019033 roo 21 9216 4.5 7.5 6.0 3.0 9241 chr2R 11009792 intron luna - chr2R 11014412 intron luna - chr2R 11019033 intron luna - chr2R_21_11010001 chr2R_11010001 RAL-849 1589 chr2R 11019846 11019910 chr2R 11024962 11025011 jockey 21 5113 3.5 10.5 7.0 2.6 5165 chr2R 11019846 intron luna - chr2R 11022428 intron luna - chr2R 11025011 intron luna - chr2R_21_11020001 chr2R_11020001 RAL-849 1590 chr2R 11032600 11032665 chr2R 11032743 11032809 28 144 7.0 9.0 8.0 3.1 209 chr2R 11032600 intron luna - chr2R 11032704 intron luna - chr2R 11032809 intron luna - chr2R_28_11030001 chr2R_11030001 RAL-849 1591 chr2R 11034237 11034310 chr2R 11034495 11034562 30 254 10.0 6.5 8.2 3.3 325 chr2R 11034237 intron luna - chr2R 11034400 intron luna - chr2R 11034562 intron luna - chr2R_30_11030001 chr2R_11030001 RAL-849 1592 chr2R 11055925 11055939 chr2R 11056276 11056283 10 360 5.5 11.0 8.2 1.1 358 chr2R 11055925 intron luna - chr2R 11056104 intron luna - chr2R 11056283 intron luna - chr2R_10_11055001 chr2R_11055001 RAL-849 1593 chr2R 11179222 11179276 chr2R 11179358 11179412 19 136 9.0 10.5 9.8 1.8 190 chr2R 11179222 intron shn + chr2R 11179317 intron shn + chr2R 11179412 intron shn + chr2R_19_11175001 chr2R_11175001 RAL-849 1594 chr2R 11194760 11194790 chr2R 11194918 11194948 10 158 11.5 15.0 13.2 0.7 188 chr2R 11194760 intron shn + chr2R 11194854 intron shn + chr2R 11194948 intron shn + chr2R_10_11190001 chr2R_11190001 RAL-849 1595 chr2R 11207781 11207834 chr2R 11208018 11208077 BS 20 242 11.5 9.0 10.2 1.8 296 chr2R 11207781 intron shn + chr2R 11207929 intron shn + chr2R 11208077 intron shn + chr2R_20_11205001 chr2R_11205001 RAL-849 1596 chr2R 11218865 11218934 chr2R 11219046 11219115 25 172 9.5 7.5 8.5 2.6 250 chr2R 11218865 intron CG9084 - chr2R 11218990 intron CG9084 - chr2R 11219115 intron CG9084 - chr2R_25_11215001 chr2R_11215001 RAL-849 1597 chr2R 11250051 11250105 chr2R 11250259 11250313 24 208 10.0 5.0 7.5 2.8 262 chr2R 11250051 intergenic CG43112 +,Or47a + chr2R 11250182 intergenic Or47a +,CG43112 + chr2R 11250313 intergenic Or47a +,CG43112 + chr2R_24_11250001 chr2R_11250001 RAL-849 1598 chr2R 11276759 11276806 chr2R 11276977 11277024 16 216 9.0 6.5 7.8 1.8 265 chr2R 11276759 intergenic not near genes chr2R 11276892 intergenic not near genes chr2R 11277024 intergenic not near genes chr2R_16_11275001 chr2R_11275001 RAL-849 1599 chr2R 11297589 11297639 chr2R 11301949 11302010 flea 19 4366 9.5 7.5 8.5 2.0 4421 chr2R 11297589 intergenic CG42336 - chr2R 11299800 intergenic not near genes chr2R 11302010 5` UTR CG7741 + chr2R_19_11295001 chr2R_11295001 RAL-849 1600 chr2R 11344103 11344157 chr2R 11344249 11344303 14 146 0.0 7.0 3.5 3.1 200 chr2R 11344103 intergenic alphaTry - chr2R 11344203 intergenic alphaTry - chr2R 11344303 3` UTR alphaTry - chr2R_14_11340001 chr2R_11340001 RAL-849 1601 chr2R 11367980 11368038 chr2R 11368106 11368164 14 126 9.0 7.0 8.0 1.6 184 chr2R 11367980 intron CG13204 + chr2R 11368072 intron CG13204 + chr2R 11368164 intron CG13204 + chr2R_14_11365001 chr2R_11365001 RAL-849 1602 chr2R 11415476 11415545 chr2R 11418675 11418744 opus 24 3198 8.5 15.5 12.0 1.8 3268 chr2R 11415476 intron Drip - chr2R 11417110 intron Drip - chr2R 11418744 intron Drip - chr2R_24_11415001 chr2R_11415001 RAL-849 1603 chr2R 11419819 11419886 chr2R 11419999 11420066 26 177 7.5 7.5 7.5 3.1 247 chr2R 11419819 intron Drip - chr2R 11419942 intron Drip - chr2R 11420066 intron Drip - chr2R_26_11415001 chr2R_11415001 RAL-849 1604 chr2R 11429842 11429942 chr2R 11430027 11430107 13 168 0.0 7.5 3.8 2.7 265 chr2R 11429842 intergenic Drip - chr2R 11429974 intergenic Drip - chr2R 11430107 intergenic Drip - chr2R_13_11425001 chr2R_11425001 RAL-849 1605 chr2R 11468104 11468120 chr2R 11468683 11468683 4 575 26.5 10.5 18.5 0.2 579 chr2R 11468104 intergenic not near genes chr2R 11468394 intergenic not near genes chr2R 11468683 intergenic not near genes chr2R_4_11465001 chr2R_11465001 RAL-849 1606 chr2R 11468126 11468173 chr2R 11468670 11468745 13 566 16.0 8.0 12.0 1.0 619 chr2R 11468126 intergenic not near genes chr2R 11468436 intergenic not near genes chr2R 11468745 intergenic not near genes chr2R_13_11465001 chr2R_11465001 RAL-849 1607 chr2R 11472606 11472669 chr2R 11473853 11473916 pogo 34 1245 13.0 11.5 12.2 2.6 1310 chr2R 11472606 intergenic not near genes chr2R 11473261 intergenic not near genes chr2R 11473916 intergenic not near genes chr2R_34_11470001 chr2R_11470001 RAL-849 1608 chr2R 11494556 11494628 chr2R 11494695 11494767 26 135 6.5 2.5 4.5 4.7 211 chr2R 11494556 intron inv + chr2R 11494662 intron inv + chr2R 11494767 intron inv + chr2R_26_11490001 chr2R_11490001 RAL-849 1609 chr2R 11498848 11498858 chr2R 11499026 11499036 4 178 14.0 0.5 7.2 0.5 188 chr2R 11498848 intron inv + chr2R 11498942 intron inv + chr2R 11499036 intron inv + chr2R_4_11495001 chr2R_11495001 RAL-849 1610 chr2R 11540421 11540495 chr2R 11540584 11540647 34 161 6.0 9.5 7.8 3.9 226 chr2R 11540421 intergenic not near genes chr2R 11540534 intergenic not near genes chr2R 11540647 intergenic not near genes chr2R_34_11540001 chr2R_11540001 RAL-849 1611 chr2R 11555356 11555418 chr2R 11555734 11555803 16 385 5.0 6.5 5.8 2.4 447 chr2R 11555356 intergenic not near genes chr2R 11555580 intergenic not near genes chr2R 11555803 intergenic not near genes chr2R_16_11555001 chr2R_11555001 RAL-849 1612 chr2R 11575001 11575032 chr2R 11575150 11575177 7 146 0.0 8.0 4.0 1.4 176 chr2R 11575001 intergenic not near genes chr2R 11575089 intergenic not near genes chr2R 11575177 intergenic not near genes chr2R_7_11575001 chr2R_11575001 RAL-849 1613 chr2R 11632501 11632537 chr2R 11632628 11632638 7 122 9.0 4.0 6.5 0.9 137 chr2R 11632501 intron CG9005 - chr2R 11632570 intron CG9005 - chr2R 11632638 intron CG9005 - chr2R_7_11630001 chr2R_11630001 RAL-849 1614 chr2R 11632542 11632578 chr2R 11632627 11632662 15 116 4.5 4.0 4.2 2.9 120 chr2R 11632542 intron CG9005 - chr2R 11632602 intron CG9005 - chr2R 11632662 intron CG9005 - chr2R_15_11630001 chr2R_11630001 RAL-849 1615 chr2R 11636372 11636385 chr2R 11636494 11636513 6 125 20.0 6.5 13.2 0.4 141 chr2R 11636372 intron CG9005 - chr2R 11636442 intron CG9005 - chr2R 11636513 intron CG9005 - chr2R_6_11635001 chr2R_11635001 RAL-849 1616 chr2R 11636391 11636442 chr2R 11636493 11636570 21 115 8.5 6.0 7.2 2.6 179 chr2R 11636391 intron CG9005 - chr2R 11636480 intron CG9005 - chr2R 11636570 intron CG9005 - chr2R_21_11635001 chr2R_11635001 RAL-849 1617 chr2R 11660354 11660387 chr2R 11660521 11660554 13 167 0.0 9.5 4.8 2.2 200 chr2R 11660354 intron Roc2 - chr2R 11660454 intron Roc2 - chr2R 11660554 intron Roc2 - chr2R_13_11660001 chr2R_11660001 RAL-849 1618 chr2R 11667332 11667402 chr2R 11667476 11667546 24 143 4.5 4.5 4.5 4.4 214 chr2R 11667332 intron,intron Roc2 -,Tret1-1 + chr2R 11667439 intron,intron Roc2 -,Tret1-1 + chr2R 11667546 intron,intron Roc2 -,Tret1-1 + chr2R_24_11665001 chr2R_11665001 RAL-849 1619 chr2R 11672804 11672849 chr2R 11672940 11672986 24 136 6.5 8.0 7.2 2.9 182 chr2R 11672804 intron,exon Roc2 -,Tret1-1 + chr2R 11672895 intron,intron Roc2 -,Tret1-1 + chr2R 11672986 intron,intron Roc2 -,Tret1-1 + chr2R_24_11670001 chr2R_11670001 RAL-849 1620 chr2R 11724106 11724179 chr2R 11724239 11724312 25 133 5.0 3.5 4.2 4.8 206 chr2R 11724106 intron pyr + chr2R 11724209 intron pyr + chr2R 11724312 exon pyr + chr2R_25_11720001 chr2R_11720001 RAL-849 1621 chr2R 11739120 11739158 chr2R 11739248 11739282 14 115 7.0 10.5 8.8 1.4 162 chr2R 11739120 intergenic not near genes chr2R 11739201 intergenic not near genes chr2R 11739282 intergenic not near genes chr2R_14_11735001 chr2R_11735001 RAL-849 1622 chr2R 11817906 11817970 chr2R 11818054 11818092 28 146 7.5 12.0 9.8 2.6 186 chr2R 11817906 intergenic not near genes chr2R 11817999 intergenic not near genes chr2R 11818092 intergenic not near genes chr2R_28_11815001 chr2R_11815001 RAL-849 1623 chr2R 11822930 11822994 chr2R 11823057 11823115 31 125 0.0 3.5 1.8 11.1 185 chr2R 11822930 intergenic not near genes chr2R 11823022 intergenic not near genes chr2R 11823115 intergenic not near genes chr2R_31_11820001 chr2R_11820001 RAL-849 1624 chr2R 11839518 11839535 chr2R 11839635 11839665 5 126 21.0 12.0 16.5 0.3 147 chr2R 11839518 5` UTR Sobp - chr2R 11839592 5` UTR Sobp - chr2R 11839665 5` UTR Sobp - chr2R_5_11835001 chr2R_11835001 RAL-849 1625 chr2R 11863808 11863886 chr2R 11863945 11864023 22 137 7.5 5.5 6.5 2.9 215 chr2R 11863808 intergenic CG42531 + chr2R 11863916 intergenic CG42531 + chr2R 11864023 intergenic CG42531 + chr2R_22_11860001 chr2R_11860001 RAL-849 1626 chr2R 11932522 11932577 chr2R 11932683 11932733 23 164 10.5 5.0 7.8 2.6 211 chr2R 11932522 intergenic not near genes chr2R 11932628 intergenic not near genes chr2R 11932733 intergenic not near genes chr2R_23_11930001 chr2R_11930001 RAL-849 1627 chr2R 12010830 12010894 chr2R 12010963 12011028 21 126 8.0 10.5 9.2 2.1 198 chr2R 12010830 intron otk - chr2R 12010929 intron otk - chr2R 12011028 intron otk - chr2R_21_12010001 chr2R_12010001 RAL-849 1628 chr2R 12052964 12053024 chr2R 12053082 12053131 16 114 9.0 9.0 9.0 1.6 167 chr2R 12052964 5` UTR CG44314 + chr2R 12053048 exon CG44314 + chr2R 12053131 exon CG44314 + chr2R_16_12050001 chr2R_12050001 RAL-849 1629 chr2R 8518787 8518803 chr2R 12066131 12066147 7 3547345 25.5 30.5 28.0 0.2 3547360 chr2R 8518787 intron mtt - chr2R 10292467 intron CAP + chr2R 12066147 exon CG8888 - chr2R_7_10290001 chr2R_10290001 RAL-849 1630 chr2R 12096785 12096788 chr2R 12097287 12097290 4 502 18.0 6.0 12.0 0.3 505 chr2R 12096785 intron jeb - chr2R 12097038 intron jeb - chr2R 12097290 intron jeb - chr2R_4_12095001 chr2R_12095001 RAL-849 1631 chr2R 12096790 12096855 chr2R 12097286 12097357 20 501 8.0 6.0 7.0 2.5 567 chr2R 12096790 intron jeb - chr2R 12097074 intron jeb - chr2R 12097357 intron jeb - chr2R_20_12095001 chr2R_12095001 RAL-849 1632 chr2R 12120359 12120437 chr2R 12120491 12120527 35 123 8.0 7.0 7.5 4.1 168 chr2R 12120359 intergenic not near genes chr2R 12120443 intergenic not near genes chr2R 12120527 intergenic not near genes chr2R_35_12120001 chr2R_12120001 RAL-849 1633 chr2R 12185961 12186032 chr2R 12186106 12186162 48 143 7.0 13.5 10.2 4.3 201 chr2R 12185961 intron Cyp6g1 + chr2R 12186062 intron Cyp6g1 + chr2R 12186162 intron Cyp6g1 + chr2R_48_12185001 chr2R_12185001 RAL-849 1634 chr2R 12185225 12185268 chr2R 12188100 12188143 19 2877 32.5 212.5 122.5 0.2 2918 chr2R 12185225 3` UTR,exon CG13175 +,CG33964 + chr2R 12186684 exon Cyp6g1 + chr2R 12188143 3` UTR Cyp6g1 + chr2R_19_12185001 chr2R_12185001 RAL-849 1635 chr2R 12189355 12189409 chr2R 12189598 12189648 25 236 212.5 203.5 208.0 0.1 293 chr2R 12189355 exon Cyp6g2 - chr2R 12189502 exon Cyp6g2 - chr2R 12189648 exon Cyp6g2 - chr2R_25_12185001 chr2R_12185001 RAL-849 1636 chr2R 12187480 12187493 chr2R 12190046 12190059 14 2568 159.5 214.5 187.0 0.1 2579 chr2R 12187480 exon Cyp6g1 + chr2R 12188770 exon Cyp6g2 - chr2R 12190059 exon Cyp6g2 - chr2R_14_12185001 chr2R_12185001 RAL-849 1637 chr2R 12187476 12187511 chr2R 12190062 12190077 32 2574 189.0 194.5 191.8 0.2 2601 chr2R 12187476 exon Cyp6g1 + chr2R 12188776 exon Cyp6g2 - chr2R 12190077 exon Cyp6g2 - chr2R_32_12185001 chr2R_12185001 RAL-849 1638 chr2R 12187472 12187490 chr2R 12190078 12190122 101 2583 155.5 176.5 166.0 0.6 2650 chr2R 12187472 exon Cyp6g1 + chr2R 12188797 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_101_12185001 chr2R_12185001 RAL-849 1639 chr2R 12213849 12213862 chr2R 12213978 12213991 6 129 2.5 9.0 5.8 0.9 142 chr2R 12213849 intergenic CG13171 + chr2R 12213920 intergenic CG13171 + chr2R 12213991 intergenic CG13171 + chr2R_6_12210001 chr2R_12210001 RAL-849 1640 chr2R 12217528 12217596 chr2R 12217659 12217727 29 129 8.0 8.0 8.0 3.2 199 chr2R 12217528 intergenic not near genes chr2R 12217628 intergenic not near genes chr2R 12217727 intergenic not near genes chr2R_29_12215001 chr2R_12215001 RAL-849 1641 chr2R 12355953 12355972 chr2R 12356073 12356110 8 132 10.0 11.0 10.5 0.7 157 chr2R 12355953 exon CG30049 + chr2R 12356032 exon CG30049 + chr2R 12356110 exon CG30049 + chr2R_8_12355001 chr2R_12355001 RAL-849 1642 chr2R 12355973 12356012 chr2R 12356070 12356130 15 132 5.0 10.0 7.5 1.8 157 chr2R 12355973 exon CG30049 + chr2R 12356052 exon CG30049 + chr2R 12356130 exon CG30049 + chr2R_15_12355001 chr2R_12355001 RAL-849 1643 chr2R 12377454 12377519 chr2R 12377626 12377691 35 172 14.5 10.5 12.5 2.6 237 chr2R 12377454 intergenic Cpr49Aa + chr2R 12377572 intergenic Cpr49Aa + chr2R 12377691 intergenic Cpr49Aa + chr2R_35_12375001 chr2R_12375001 RAL-849 1644 chr2R 12413117 12413126 chr2R 12413243 12413252 6 126 7.0 0.0 3.5 1.3 135 chr2R 12413117 intergenic not near genes chr2R 12413184 intergenic not near genes chr2R 12413252 intergenic not near genes chr2R_6_12410001 chr2R_12410001 RAL-849 1645 chr2R 12481143 12481155 chr2R 12482972 12483008 roo 4 1848 6.5 14.0 10.2 0.4 1865 chr2R 12481143 exon Dh44-R2 + chr2R 12482076 intron Dh44-R2 + chr2R 12483008 intron Dh44-R2 + chr2R_4_12480001 chr2R_12480001 RAL-849 1646 chr2R 12501649 12501668 chr2R 12503861 12503880 Rt1c 5 2211 19.0 8.5 13.8 0.3 2231 chr2R 12501649 intron fdl - chr2R 12502764 intron fdl - chr2R 12503880 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-849 1647 chr2R 12501680 12501715 chr2R 12503871 12503917 Rt1c 17 2206 11.0 10.0 10.5 1.5 2237 chr2R 12501680 intron fdl - chr2R 12502798 intron fdl - chr2R 12503917 intron fdl - chr2R_17_12500001 chr2R_12500001 RAL-849 1648 chr2R 12565545 12565594 chr2R 12565978 12566027 22 433 1.5 8.5 5.0 3.7 482 chr2R 12565545 intergenic not near genes chr2R 12565786 intergenic Cyp301a1 + chr2R 12566027 intergenic Cyp301a1 + chr2R_22_12565001 chr2R_12565001 RAL-849 1649 chr2R 12627423 12627495 chr2R 12627576 12627638 15 152 0.0 12.0 6.0 2.1 215 chr2R 12627423 intron CG17760 + chr2R 12627530 intron CG17760 + chr2R 12627638 exon CG17760 + chr2R_15_12625001 chr2R_12625001 RAL-849 1650 chr2R 12643740 12643819 chr2R 12643866 12643925 14 120 5.5 5.0 5.2 2.3 185 chr2R 12643740 intron CG8785 - chr2R 12643832 intron CG8785 - chr2R 12643925 exon CG8785 - chr2R_14_12640001 chr2R_12640001 RAL-849 1651 chr2R 12693916 12693942 chr2R 12694043 12694069 14 127 6.0 10.5 8.2 1.5 153 chr2R 12693916 intergenic not near genes chr2R 12693992 intergenic not near genes chr2R 12694069 intergenic not near genes chr2R_14_12690001 chr2R_12690001 RAL-849 1652 chr2R 12707472 12707548 chr2R 12715888 12715964 roo 16 8416 4.0 3.0 3.5 3.6 8492 chr2R 12707472 intron CG42663 + chr2R 12711718 intron CG42663 + chr2R 12715964 intron CG42663 + chr2R_16_12710001 chr2R_12710001 RAL-849 1653 chr2R 12726278 12726306 chr2R 12726420 12726448 18 140 16.0 8.5 12.2 1.4 170 chr2R 12726278 intron CG42663 + chr2R 12726363 intron CG42663 + chr2R 12726448 intron CG42663 + chr2R_18_12725001 chr2R_12725001 RAL-849 1654 chr2R 12726311 12726346 chr2R 12726417 12726488 13 139 7.5 8.0 7.8 1.5 177 chr2R 12726311 intron CG42663 + chr2R 12726400 intron CG42663 + chr2R 12726488 intron CG42663 + chr2R_13_12725001 chr2R_12725001 RAL-849 1655 chr2R 12728852 12728901 chr2R 12729007 12729053 8 153 0.0 11.5 5.8 1.2 201 chr2R 12728852 intron CG42663 + chr2R 12728952 intron CG42663 + chr2R 12729053 intron CG42663 + chr2R_8_12725001 chr2R_12725001 RAL-849 1656 chr2R 12777763 12777802 chr2R 12777922 12777961 15 159 10.5 7.5 9.0 1.5 198 chr2R 12777763 5` UTR CR45266 + chr2R 12777862 5` UTR CR45266 + chr2R 12777961 5` UTR CR45266 + chr2R_15_12775001 chr2R_12775001 RAL-849 1657 chr2R 12789255 12789320 chr2R 12797662 12797733 roo 30 8406 6.5 8.5 7.5 3.5 8478 chr2R 12789255 intron,3` UTR sca +,CR45137 - chr2R 12793494 intron,intron sca +,CR45137 - chr2R 12797733 intron,3` UTR sca +,CR45137 - chr2R_30_12790001 chr2R_12790001 RAL-849 1658 chr2R 12819103 12819182 chr2R 12819277 12819352 14 171 4.0 0.0 2.0 4.7 249 chr2R 12819103 intergenic not near genes chr2R 12819228 intergenic not near genes chr2R 12819352 intergenic not near genes chr2R_14_12815001 chr2R_12815001 RAL-849 1659 chr2R 12819409 12819472 chr2R 12824528 12824591 jockey 18 5119 8.5 7.0 7.8 2.0 5182 chr2R 12819409 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824591 intergenic not near genes chr2R_18_12820001 chr2R_12820001 RAL-849 1660 chr2R 12927568 12927639 chr2R 12927696 12927773 32 131 2.0 8.0 5.0 5.3 205 chr2R 12927568 intron sug + chr2R 12927670 intron sug + chr2R 12927773 intron sug + chr2R_32_12925001 chr2R_12925001 RAL-849 1661 chr2R 13027706 13027732 chr2R 13027835 13027861 6 129 6.5 0.5 3.5 1.3 155 chr2R 13027706 intergenic not near genes chr2R 13027784 intergenic not near genes chr2R 13027861 intergenic not near genes chr2R_6_13025001 chr2R_13025001 RAL-849 1662 chr2R 13034648 13034679 chr2R 13034778 13034824 8 141 0.0 0.5 0.2 6.7 176 chr2R 13034648 intergenic not near genes chr2R 13034736 intergenic not near genes chr2R 13034824 intergenic not near genes chr2R_8_13030001 chr2R_13030001 RAL-849 1663 chr2R 13043014 13043061 chr2R 13043145 13043192 7 131 6.5 7.0 6.8 0.9 178 chr2R 13043014 intergenic not near genes chr2R 13043103 intergenic not near genes chr2R 13043192 intergenic not near genes chr2R_7_13040001 chr2R_13040001 RAL-849 1664 chr2R 13073599 13073608 chr2R 13074010 13074013 7 410 0.0 21.5 10.8 0.6 414 chr2R 13073599 intron Drl-2 - chr2R 13073806 intron Drl-2 - chr2R 13074013 intron Drl-2 - chr2R_7_13070001 chr2R_13070001 RAL-849 1665 chr2R 13078711 13078738 chr2R 13078858 13078885 16 147 13.5 8.0 10.8 1.4 174 chr2R 13078711 intron Drl-2 - chr2R 13078798 intron Drl-2 - chr2R 13078885 intron Drl-2 - chr2R_16_13075001 chr2R_13075001 RAL-849 1666 chr2R 13136798 13136854 chr2R 13141646 13141702 Doc 26 4845 14.5 8.5 11.5 2.1 4904 chr2R 13136798 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141702 intron Cap-G + chr2R_26_13135001 chr2R_13135001 RAL-849 1667 chr2R 13167389 13167460 chr2R 13167533 13167610 17 145 7.0 0.0 3.5 3.8 221 chr2R 13167389 intron GLaz - chr2R 13167500 intron GLaz - chr2R 13167610 intron GLaz - chr2R_17_13165001 chr2R_13165001 RAL-849 1668 chr2R 13194814 13194852 chr2R 13194961 13194989 5 140 12.5 13.0 12.8 0.4 175 chr2R 13194814 intergenic not near genes chr2R 13194902 intergenic not near genes chr2R 13194989 intergenic not near genes chr2R_5_13190001 chr2R_13190001 RAL-849 1669 chr2R 13220490 13220547 chr2R 13220618 13220696 18 134 0.0 4.0 2.0 6.0 206 chr2R 13220490 intron CG17059 + chr2R 13220593 intron CG17059 + chr2R 13220696 intron CG17059 + chr2R_18_13220001 chr2R_13220001 RAL-849 1670 chr2R 13249524 13249592 chr2R 13249663 13249728 17 137 8.0 7.0 7.5 2.0 204 chr2R 13249524 intron CG4712 - chr2R 13249626 intron CG4712 - chr2R 13249728 intron CG4712 - chr2R_17_13245001 chr2R_13245001 RAL-849 1671 chr2R 13302529 13302598 chr2R 13302657 13302726 26 128 7.0 6.5 6.8 3.3 197 chr2R 13302529 intergenic not near genes chr2R 13302628 intergenic not near genes chr2R 13302726 intergenic not near genes chr2R_26_13300001 chr2R_13300001 RAL-849 1672 chr2R 13372615 13372694 chr2R 13372739 13372824 8 125 7.5 5.0 6.2 1.1 209 chr2R 13372615 intergenic not near genes chr2R 13372720 intergenic not near genes chr2R 13372824 intergenic not near genes chr2R_8_13370001 chr2R_13370001 RAL-849 1673 chr2R 13376614 13376635 chr2R 13376774 13376795 10 160 3.0 10.5 6.8 1.3 181 chr2R 13376614 intron CG10814 - chr2R 13376704 intron CG10814 - chr2R 13376795 exon CG10814 - chr2R_10_13375001 chr2R_13375001 RAL-849 1674 chr2R 13403882 13403937 chr2R 13404017 13404072 17 135 8.0 0.5 4.2 3.3 190 chr2R 13403882 intergenic not near genes chr2R 13403977 intergenic not near genes chr2R 13404072 intergenic not near genes chr2R_17_13400001 chr2R_13400001 RAL-849 1675 chr2R 13431442 13431518 chr2R 13431571 13431647 25 128 8.0 6.0 7.0 3.1 205 chr2R 13431442 intron CG42321 - chr2R 13431544 intron CG42321 - chr2R 13431647 intron CG42321 - chr2R_25_13430001 chr2R_13430001 RAL-849 1676 chr2R 13439066 13439138 chr2R 13439230 13439326 26 187 6.5 0.0 3.2 6.2 260 chr2R 13439066 intergenic CG42321 -,cnn - chr2R 13439196 intergenic cnn -,CG42321 - chr2R 13439326 3` UTR cnn - chr2R_26_13435001 chr2R_13435001 RAL-849 1677 chr2R 13468844 13468874 chr2R 13468971 13469001 5 124 10.5 0.5 5.5 0.8 157 chr2R 13468844 intron arr - chr2R 13468922 intron arr - chr2R 13469001 intron arr - chr2R_5_13465001 chr2R_13465001 RAL-849 1678 chr2R 13531265 13531270 chr2R 13531406 13531411 4 141 0.0 4.5 2.2 1.2 146 chr2R 13531265 intron Vmat - chr2R 13531338 intron Vmat - chr2R 13531411 intron Vmat - chr2R_4_13530001 chr2R_13530001 RAL-849 1679 chr2R 13532470 13532528 chr2R 13532636 13532694 12 166 7.0 7.5 7.2 1.5 224 chr2R 13532470 intron Vmat - chr2R 13532582 intron Vmat - chr2R 13532694 intron Vmat - chr2R_12_13530001 chr2R_13530001 RAL-849 1680 chr2R 13554686 13554770 chr2R 13554828 13554905 11 137 0.0 8.0 4.0 2.2 219 chr2R 13554686 intron Roe1 + chr2R 13554796 intron Roe1 + chr2R 13554905 intron Roe1 + chr2R_11_13550001 chr2R_13550001 RAL-849 1681 chr2R 13568127 13568190 chr2R 13568260 13568321 14 131 5.0 2.5 3.8 2.9 194 chr2R 13568127 intergenic not near genes chr2R 13568224 intergenic not near genes chr2R 13568321 intergenic not near genes chr2R_14_13565001 chr2R_13565001 RAL-849 1682 chr2R 13580453 13580521 chr2R 13580854 13580921 jockey 26 398 9.5 13.5 11.5 2.1 468 chr2R 13580453 3` UTR CG6191 - chr2R 13580687 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580921 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_26_13580001 chr2R_13580001 RAL-849 1683 chr2R 13622164 13622192 chr2R 13622292 13622320 15 128 3.5 15.5 9.5 1.4 156 chr2R 13622164 intergenic not near genes chr2R 13622242 intergenic not near genes chr2R 13622320 intergenic not near genes chr2R_15_13620001 chr2R_13620001 RAL-849 1684 chr2R 13632270 13632294 chr2R 13632408 13632432 16 138 14.5 7.0 10.8 1.4 162 chr2R 13632270 intron fas + chr2R 13632351 intron fas + chr2R 13632432 intron fas + chr2R_16_13630001 chr2R_13630001 RAL-849 1685 chr2R 13709783 13709831 chr2R 13709940 13709988 19 157 7.5 10.0 8.8 1.9 205 chr2R 13709783 intron fas + chr2R 13709886 intron fas + chr2R 13709988 intron fas + chr2R_19_13705001 chr2R_13705001 RAL-849 1686 chr2R 13721161 13721227 chr2R 13721287 13721299 21 124 8.5 8.5 8.5 2.2 138 chr2R 13721161 intron fas + chr2R 13721230 intron fas + chr2R 13721299 intron fas + chr2R_21_13720001 chr2R_13720001 RAL-849 1687 chr2R 13727802 13727848 chr2R 13727938 13727938 14 132 7.5 15.0 11.2 1.1 136 chr2R 13727802 intron fas + chr2R 13727870 intron fas + chr2R 13727938 intron fas + chr2R_14_13725001 chr2R_13725001 RAL-849 1688 chr2R 13728090 13728154 chr2R 13735797 13735861 opus 19 7707 9.5 9.5 9.5 1.8 7771 chr2R 13728090 intron fas + chr2R 13731976 intron fas + chr2R 13735861 intron fas + chr2R_19_13730001 chr2R_13730001 RAL-849 1689 chr2R 13752777 13752833 chr2R 13752925 13752981 16 148 8.0 8.5 8.2 1.7 204 chr2R 13752777 intergenic not near genes chr2R 13752879 intergenic not near genes chr2R 13752981 intergenic not near genes chr2R_16_13750001 chr2R_13750001 RAL-849 1690 chr2R 13768940 13769002 chr2R 13769089 13769151 22 147 9.5 8.0 8.8 2.2 211 chr2R 13768940 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769151 intergenic not near genes chr2R_22_13765001 chr2R_13765001 RAL-849 1691 chr2R 13770450 13770526 chr2R 13770597 13770666 15 144 0.0 7.5 3.8 3.1 216 chr2R 13770450 intron Cpr50Ca + chr2R 13770558 intron Cpr50Ca + chr2R 13770666 intron Cpr50Ca + chr2R_15_13770001 chr2R_13770001 RAL-849 1692 chr2R 13817645 13817690 chr2R 13817777 13817822 14 131 9.0 6.5 7.8 1.6 177 chr2R 13817645 intron stj + chr2R 13817734 intron stj + chr2R 13817822 intron stj + chr2R_14_13815001 chr2R_13815001 RAL-849 1693 chr2R 13905564 13905635 chr2R 13907595 13907617 Rt1a 22 2026 12.0 9.5 10.8 1.9 2053 chr2R 13905564 intron shot - chr2R 13906590 intron shot - chr2R 13907617 intron shot - chr2R_22_13905001 chr2R_13905001 RAL-849 1694 chr2R 13925851 13925888 chr2R 13926037 13926074 7 186 7.5 8.5 8.0 0.8 223 chr2R 13925851 intron shot - chr2R 13925962 intron shot - chr2R 13926074 intron shot - chr2R_7_13925001 chr2R_13925001 RAL-849 1695 chr2R 13958228 13958287 chr2R 13958388 13958450 21 162 8.0 7.5 7.8 2.4 222 chr2R 13958228 intergenic AGO1 -,Rpn13 - chr2R 13958339 intergenic Rpn13 -,AGO1 - chr2R 13958450 intergenic Rpn13 -,AGO1 - chr2R_21_13955001 chr2R_13955001 RAL-849 1696 chr2R 14019919 14019962 chr2R 14020039 14020099 17 139 3.5 2.5 3.0 4.2 180 chr2R 14019919 intron mam + chr2R 14020009 intron mam + chr2R 14020099 intron mam + chr2R_17_14020001 chr2R_14020001 RAL-849 1697 chr2R 14037216 14037274 chr2R 14037349 14037407 5 133 2.0 3.5 2.8 1.3 191 chr2R 14037216 intron mam + chr2R 14037312 intron mam + chr2R 14037407 intron mam + chr2R_5_14035001 chr2R_14035001 RAL-849 1698 chr2R 14050823 14050850 chr2R 14050940 14050964 7 128 10.5 14.5 12.5 0.5 141 chr2R 14050823 intron mam + chr2R 14050894 intron mam + chr2R 14050964 intron mam + chr2R_7_14050001 chr2R_14050001 RAL-849 1699 chr2R 14093385 14093393 chr2R 14109586 14109594 4 16201 8.5 0.0 4.2 0.8 16209 chr2R 14093385 intron Prosap - chr2R 14101490 intron Prosap - chr2R 14109594 intron Prosap - chr2R_4_14100001 chr2R_14100001 RAL-849 1700 chr2R 14110936 14110992 chr2R 14111230 14111286 23 294 7.0 3.5 5.2 3.7 350 chr2R 14110936 intron Prosap - chr2R 14111111 intron Prosap - chr2R 14111286 intron Prosap - chr2R_23_14110001 chr2R_14110001 RAL-849 1701 chr2R 14129680 14129746 chr2R 14129832 14129832 5 132 6.5 0.5 3.5 1.1 152 chr2R 14129680 intron Prosap - chr2R 14129756 intron Prosap - chr2R 14129832 intron Prosap - chr2R_5_14125001 chr2R_14125001 RAL-849 1702 chr2R 14168321 14168388 chr2R 14168460 14168527 16 137 8.0 7.0 7.5 1.9 206 chr2R 14168321 intergenic CG18327 +,CG18324 + chr2R 14168424 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168527 intergenic CG18324 +,CG18327 +,CR44368 - chr2R_16_14165001 chr2R_14165001 RAL-849 1703 chr2R 14277535 14277605 chr2R 14277667 14277671 23 128 10.0 9.0 9.5 2.2 136 chr2R 14277535 5` UTR Ih + chr2R 14277603 5` UTR Ih + chr2R 14277671 5` UTR Ih + chr2R_23_14275001 chr2R_14275001 RAL-849 1704 chr2R 14285002 14285042 chr2R 14285147 14285189 9 146 9.0 7.5 8.2 1.0 187 chr2R 14285002 intron Ih + chr2R 14285096 intron Ih + chr2R 14285189 intron Ih + chr2R_9_14285001 chr2R_14285001 RAL-849 1705 chr2R 14294790 14294857 chr2R 14294920 14294987 47 128 6.5 13.5 10.0 4.3 197 chr2R 14294790 intron Ih + chr2R 14294888 intron Ih + chr2R 14294987 intron Ih + chr2R_47_14290001 chr2R_14290001 RAL-849 1706 chr2R 14322711 14322768 chr2R 14322851 14322908 14 139 3.0 6.5 4.8 2.4 197 chr2R 14322711 intron Shroom + chr2R 14322810 intron Shroom + chr2R 14322908 intron Shroom + chr2R_14_14320001 chr2R_14320001 RAL-849 1707 chr2R 14357505 14357577 chr2R 14357645 14357716 28 140 6.5 9.0 7.8 3.2 211 chr2R 14357505 intergenic CG8617 -,Arc1 - chr2R 14357610 intergenic Arc1 -,CG8617 - chr2R 14357716 intergenic Arc1 -,CG8617 - chr2R_28_14355001 chr2R_14355001 RAL-849 1708 chr2R 14393821 14393862 chr2R 14393956 14393997 15 134 19.5 10.0 14.8 0.9 176 chr2R 14393821 intergenic not near genes chr2R 14393909 intergenic not near genes chr2R 14393997 intergenic not near genes chr2R_15_14390001 chr2R_14390001 RAL-849 1709 chr2R 14393870 14393896 chr2R 14393949 14394016 12 123 9.5 10.0 9.8 1.1 146 chr2R 14393870 intergenic not near genes chr2R 14393943 intergenic not near genes chr2R 14394016 intergenic not near genes chr2R_12_14390001 chr2R_14390001 RAL-849 1710 chr2R 14394188 14394198 chr2R 14399027 14399037 Doc 5 4839 15.5 5.0 10.2 0.4 4849 chr2R 14394188 intergenic not near genes chr2R 14396612 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_5_14395001 chr2R_14395001 RAL-849 1711 chr2R 14467257 14467326 chr2R 14476465 14476496 roo 33 9206 5.5 5.5 5.5 5.1 9239 chr2R 14467257 intergenic not near genes chr2R 14471876 intergenic not near genes chr2R 14476496 5` UTR CR44462 + chr2R_33_14470001 chr2R_14470001 RAL-849 1712 chr2R 14497350 14497409 chr2R 14498566 14498625 1360 16 1215 5.5 7.0 6.2 2.2 1275 chr2R 14497350 3` UTR Cpsf160 - chr2R 14497988 intron Cpsf160 - chr2R 14498625 3` UTR Cpsf160 - chr2R_16_14495001 chr2R_14495001 RAL-849 1713 chr2R 14514435 14514498 chr2R 14514578 14514641 14 143 9.0 8.0 8.5 1.5 206 chr2R 14514435 intron,exon Cpr51A -,CG30197 + chr2R 14514538 intron,intron Cpr51A -,CG30197 + chr2R 14514641 intron,intron Cpr51A -,CG30197 + chr2R_14_14510001 chr2R_14510001 RAL-849 1714 chr2R 14530325 14530373 chr2R 14530464 14530512 12 138 9.5 5.0 7.2 1.5 187 chr2R 14530325 intron ttv + chr2R 14530418 intron ttv + chr2R 14530512 intron ttv + chr2R_12_14530001 chr2R_14530001 RAL-849 1715 chr2R 14533733 14533786 chr2R 14533865 14533919 11 133 4.5 4.5 4.5 2.0 186 chr2R 14533733 intron ttv + chr2R 14533826 intron ttv + chr2R 14533919 intron ttv + chr2R_11_14530001 chr2R_14530001 RAL-849 1716 chr2R 14565530 14565587 chr2R 14565657 14565714 23 127 9.5 11.5 10.5 2.0 184 chr2R 14565530 intron ttv + chr2R 14565622 intron ttv + chr2R 14565714 intron ttv + chr2R_23_14565001 chr2R_14565001 RAL-849 1717 chr2R 14569941 14570018 chr2R 14570385 14570406 29 439 7.0 9.5 8.2 3.2 465 chr2R 14569941 intron ttv + chr2R 14570174 intron ttv + chr2R 14570406 intron ttv + chr2R_29_14570001 chr2R_14570001 RAL-849 1718 chr2R 14697786 14697846 chr2R 14697918 14697978 6 132 8.0 2.0 5.0 1.0 192 chr2R 14697786 intron mspo - chr2R 14697882 intron mspo - chr2R 14697978 intron mspo - chr2R_6_14695001 chr2R_14695001 RAL-849 1719 chr2R 14708229 14708291 chr2R 14708391 14708453 19 160 6.5 7.0 6.8 2.4 224 chr2R 14708229 intron mspo - chr2R 14708341 intron mspo - chr2R 14708453 intron mspo - chr2R_19_14705001 chr2R_14705001 RAL-849 1720 chr2R 14722263 14722283 chr2R 14722417 14722437 8 153 6.0 9.0 7.5 0.9 174 chr2R 14722263 intergenic not near genes chr2R 14722350 intergenic not near genes chr2R 14722437 intergenic not near genes chr2R_8_14720001 chr2R_14720001 RAL-849 1721 chr2R 14722284 14722298 chr2R 14722438 14722452 6 154 4.0 13.0 8.5 0.6 168 chr2R 14722284 intergenic not near genes chr2R 14722368 intergenic not near genes chr2R 14722452 intergenic not near genes chr2R_6_14720001 chr2R_14720001 RAL-849 1722 chr2R 14737583 14737639 chr2R 14737717 14737718 22 128 5.5 9.0 7.2 2.7 135 chr2R 14737583 3` UTR CR43428 - chr2R 14737650 3` UTR CR43428 - chr2R 14737718 3` UTR CR43428 - chr2R_22_14735001 chr2R_14735001 RAL-849 1723 chr2R 14796816 14796840 chr2R 14796953 14796977 10 136 20.0 9.0 14.5 0.6 161 chr2R 14796816 intron kn - chr2R 14796896 intron kn - chr2R 14796977 intron kn - chr2R_10_14795001 chr2R_14795001 RAL-849 1724 chr2R 14796841 14796887 chr2R 14796952 14797024 21 131 8.5 8.5 8.5 2.2 183 chr2R 14796841 intron kn - chr2R 14796932 intron kn - chr2R 14797024 intron kn - chr2R_21_14795001 chr2R_14795001 RAL-849 1725 chr2R 14799866 14799881 chr2R 14799992 14800007 6 126 0.0 14.5 7.2 0.7 141 chr2R 14799866 intron kn - chr2R 14799936 intron kn - chr2R 14800007 intron kn - chr2R_6_14795001 chr2R_14795001 RAL-849 1726 chr2R 14803429 14803505 chr2R 14803559 14803635 15 130 0.0 4.0 2.0 5.0 206 chr2R 14803429 intron kn - chr2R 14803532 intron kn - chr2R 14803635 intron kn - chr2R_15_14800001 chr2R_14800001 RAL-849 1727 chr2R 14816062 14816134 chr2R 14816208 14816280 32 140 8.5 7.5 8.0 3.6 218 chr2R 14816062 intergenic not near genes chr2R 14816171 intergenic not near genes chr2R 14816280 intergenic not near genes chr2R_32_14815001 chr2R_14815001 RAL-849 1728 chr2R 14820881 14820927 chr2R 14821018 14821064 26 137 5.0 15.5 10.2 2.3 183 chr2R 14820881 intergenic not near genes chr2R 14820972 intergenic not near genes chr2R 14821064 intergenic not near genes chr2R_26_14820001 chr2R_14820001 RAL-849 1729 chr2R 14826350 14826384 chr2R 14826504 14826538 14 154 6.0 2.5 4.2 2.7 188 chr2R 14826350 intergenic not near genes chr2R 14826444 intergenic not near genes chr2R 14826538 intergenic not near genes chr2R_14_14825001 chr2R_14825001 RAL-849 1730 chr2R 14854991 14855135 chr2R 14855132 14855288 7 143 0.0 0.0 0.0 7.0 297 chr2R 14854991 5` UTR Ciao1 - chr2R 14855140 intergenic Ciao1 -,HPS1 + chr2R 14855288 intergenic HPS1 +,Ciao1 - chr2R_7_14855001 chr2R_14855001 RAL-849 1731 chr2R 14880803 14880877 chr2R 14881474 14881548 23 671 5.0 5.0 5.0 3.8 745 chr2R 14880803 exon Cyp6a9 - chr2R 14881176 exon Cyp6a9 - chr2R 14881548 intergenic Cyp6a9 - chr2R_23_14880001 chr2R_14880001 RAL-849 1732 chr2R 14889171 14889238 chr2R 14897829 14897888 Max-element 21 8653 10.0 0.5 5.2 3.4 8717 chr2R 14889171 intergenic Cyp6a8 - chr2R 14893530 intergenic not near genes chr2R 14897888 intergenic not near genes chr2R_21_14890001 chr2R_14890001 RAL-849 1733 chr2R 14911660 14911722 chr2R 14911833 14911895 15 172 6.5 6.0 6.2 2.1 235 chr2R 14911660 intron CG10249 - chr2R 14911778 intron CG10249 - chr2R 14911895 intron CG10249 - chr2R_15_14910001 chr2R_14910001 RAL-849 1734 chr2R 14917803 14917879 chr2R 14917938 14918014 37 134 6.0 8.5 7.2 4.5 211 chr2R 14917803 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14918014 intron CG10249 - chr2R_37_14915001 chr2R_14915001 RAL-849 1735 chr2R 14922099 14922141 chr2R 14922225 14922256 19 125 13.5 6.0 9.8 1.8 157 chr2R 14922099 intron CG10249 - chr2R 14922178 intron CG10249 - chr2R 14922256 intron CG10249 - chr2R_19_14920001 chr2R_14920001 RAL-849 1736 chr2R 14987339 14987407 chr2R 14987533 14987601 21 194 7.5 7.0 7.2 2.6 262 chr2R 14987339 intron pcs + chr2R 14987470 intron pcs + chr2R 14987601 intron pcs + chr2R_21_14985001 chr2R_14985001 RAL-849 1737 chr2R 14993355 14993415 chr2R 14997037 14997110 38 3684 63.0 54.5 58.8 0.6 3755 chr2R 14993355 exon CG10265 - chr2R 14995232 intergenic CR43830 + chr2R 14997110 intergenic not near genes chr2R_38_14995001 chr2R_14995001 RAL-849 1738 chr2R 14998465 14998509 chr2R 14998655 14998699 20 189 8.0 5.5 6.8 2.6 234 chr2R 14998465 intergenic not near genes chr2R 14998582 intergenic not near genes chr2R 14998699 intergenic not near genes chr2R_20_14995001 chr2R_14995001 RAL-849 1739 chr2R 15003556 15003615 chr2R 15003918 15003977 19 361 0.0 6.0 3.0 4.8 421 chr2R 15003556 intergenic not near genes chr2R 15003766 intergenic not near genes chr2R 15003977 intergenic not near genes chr2R_19_15000001 chr2R_15000001 RAL-849 1740 chr2R 15004683 15004742 chr2R 15005062 15005121 jockey 18 379 14.0 15.0 14.5 1.2 438 chr2R 15004683 intergenic not near genes chr2R 15004902 intergenic not near genes chr2R 15005121 intergenic not near genes chr2R_18_15000001 chr2R_15000001 RAL-849 1741 chr2R 15015411 15015477 chr2R 15022885 15022951 mdg1 29 7472 7.5 0.5 4.0 5.8 7540 chr2R 15015411 intron hbs + chr2R 15019181 intron hbs + chr2R 15022951 intron hbs + chr2R_29_15015001 chr2R_15015001 RAL-849 1742 chr2R 15084420 15084447 chr2R 15084566 15084593 14 143 18.0 0.0 9.0 1.4 173 chr2R 15084420 intergenic not near genes chr2R 15084506 intergenic not near genes chr2R 15084593 intergenic not near genes chr2R_14_15080001 chr2R_15080001 RAL-849 1743 chr2R 15084941 15085000 chr2R 15092040 15092098 297 9 7098 8.5 6.0 7.2 1.1 7157 chr2R 15084941 intergenic not near genes chr2R 15088520 intergenic not near genes chr2R 15092098 5` UTR CR44457 + chr2R_9_15085001 chr2R_15085001 RAL-849 1744 chr2R 15094843 15094907 chr2R 15094970 15095034 22 127 2.5 7.0 4.8 3.8 191 chr2R 15094843 intergenic not near genes chr2R 15094938 intergenic not near genes chr2R 15095034 intergenic not near genes chr2R_22_15090001 chr2R_15090001 RAL-849 1745 chr2R 15119287 15119297 chr2R 15127818 15127828 Tirant 5 8531 19.5 8.5 14.0 0.3 8541 chr2R 15119287 intron chn + chr2R 15123558 intron chn + chr2R 15127828 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-849 1746 chr2R 15119301 15119315 chr2R 15127817 15127846 Tirant 4 8522 16.0 8.5 12.2 0.3 8545 chr2R 15119301 intron chn + chr2R 15123574 intron chn + chr2R 15127846 intron chn + chr2R_4_15120001 chr2R_15120001 RAL-849 1747 chr2R 15119316 15119337 chr2R 15127813 15127868 Tirant 10 8522 12.5 7.5 10.0 0.9 8552 chr2R 15119316 intron chn + chr2R 15123592 intron chn + chr2R 15127868 intron chn + chr2R_10_15120001 chr2R_15120001 RAL-849 1748 chr2R 15133393 15133460 chr2R 15133553 15133627 18 164 4.0 3.0 3.5 4.0 234 chr2R 15133393 intron chn + chr2R 15133510 intron chn + chr2R 15133627 intron chn + chr2R_18_15130001 chr2R_15130001 RAL-849 1749 chr2R 15137925 15137954 chr2R 15138054 15138086 9 131 16.0 7.0 11.5 0.7 161 chr2R 15137925 intron chn + chr2R 15138006 intron chn + chr2R 15138086 intron chn + chr2R_9_15135001 chr2R_15135001 RAL-849 1750 chr2R 15137955 15137991 chr2R 15138050 15138088 7 117 9.0 7.5 8.2 0.8 133 chr2R 15137955 intron chn + chr2R 15138022 intron chn + chr2R 15138088 intron chn + chr2R_7_15135001 chr2R_15135001 RAL-849 1751 chr2R 15152183 15152253 chr2R 15152353 15152421 20 173 10.0 2.5 6.2 2.8 238 chr2R 15152183 intergenic not near genes chr2R 15152302 intergenic not near genes chr2R 15152421 intergenic not near genes chr2R_20_15150001 chr2R_15150001 RAL-849 1752 chr2R 15296109 15296170 chr2R 15296242 15296303 26 132 8.0 4.0 6.0 3.7 194 chr2R 15296109 intron Trpm - chr2R 15296206 intron Trpm - chr2R 15296303 intron Trpm - chr2R_26_15295001 chr2R_15295001 RAL-849 1753 chr2R 15330173 15330228 chr2R 15330342 15330412 11 183 0.0 4.0 2.0 3.7 239 chr2R 15330173 intergenic CR44371 - chr2R 15330292 intergenic CR44371 - chr2R 15330412 3` UTR CR44371 - chr2R_11_15330001 chr2R_15330001 RAL-849 1754 chr2R 15340646 15340665 chr2R 15349279 15349298 Tirant 6 8633 18.5 14.0 16.2 0.3 8652 chr2R 15340646 intron unc-5 + chr2R 15344972 intron unc-5 + chr2R 15349298 intron unc-5 + chr2R_6_15340001 chr2R_15340001 RAL-849 1755 chr2R 15374796 15375046 chr2R 15374929 15375206 11 156 5.5 5.0 5.2 1.8 410 chr2R 15374796 intergenic not near genes chr2R 15375001 intergenic not near genes chr2R 15375206 intergenic not near genes chr2R_11_15370001 chr2R_15370001 RAL-849 1756 chr2R 15450942 15450970 chr2R 15451087 15451103 9 141 9.5 6.5 8.0 1.0 161 chr2R 15450942 intron CG43729 + chr2R 15451022 intron CG43729 + chr2R 15451103 intron CG43729 + chr2R_9_15450001 chr2R_15450001 RAL-849 1757 chr2R 15450974 15451011 chr2R 15451080 15451156 16 138 5.5 6.0 5.8 2.4 182 chr2R 15450974 intron CG43729 + chr2R 15451065 intron CG43729 + chr2R 15451156 intron CG43729 + chr2R_16_15450001 chr2R_15450001 RAL-849 1758 chr2R 15462084 15462154 chr2R 15462381 15462430 13 280 52.0 45.5 48.8 0.3 346 chr2R 15462084 intron CG43729 + chr2R 15462257 intron CG43729 + chr2R 15462430 intron CG43729 + chr2R_13_15460001 chr2R_15460001 RAL-849 1759 chr2R 15538264 15538281 chr2R 15538400 15538405 6 133 14.5 6.0 10.2 0.5 141 chr2R 15538264 5` UTR CG30467 + chr2R 15538334 exon CG30467 + chr2R 15538405 exon CG30467 + chr2R_6_15535001 chr2R_15535001 RAL-849 1760 chr2R 15538300 15538324 chr2R 15538391 15538460 12 120 7.5 3.5 5.5 1.8 160 chr2R 15538300 5` UTR CG30467 + chr2R 15538380 exon CG30467 + chr2R 15538460 exon CG30467 + chr2R_12_15535001 chr2R_15535001 RAL-849 1761 chr2R 15645630 15645703 chr2R 15645776 15645850 15 141 1.5 0.0 0.8 8.3 220 chr2R 15645630 intron CG42524 + chr2R 15645740 intron CG42524 + chr2R 15645850 intron CG42524 + chr2R_15_15645001 chr2R_15645001 RAL-849 1762 chr2R 15656015 15656062 chr2R 15656156 15656203 8 141 0.0 12.0 6.0 1.1 188 chr2R 15656015 intron CG42524 + chr2R 15656109 intron CG42524 + chr2R 15656203 intron CG42524 + chr2R_8_15655001 chr2R_15655001 RAL-849 1763 chr2R 15685321 15685396 chr2R 15685474 15685549 24 152 7.0 10.5 8.8 2.4 228 chr2R 15685321 intron,exon Ranbp11 +,CG30082 - chr2R 15685435 intron,intron Ranbp11 +,CG30082 - chr2R 15685549 intron,exon Ranbp11 +,CG30082 - chr2R_24_15685001 chr2R_15685001 RAL-849 1764 chr2R 15702915 15702970 chr2R 15703042 15703096 9 126 7.5 1.5 4.5 1.6 181 chr2R 15702915 intergenic not near genes chr2R 15703006 intergenic not near genes chr2R 15703096 intergenic not near genes chr2R_9_15700001 chr2R_15700001 RAL-849 1765 chr2R 15714625 15714688 chr2R 15714770 15714835 29 154 5.0 7.0 6.0 4.1 210 chr2R 15714625 intergenic not near genes chr2R 15714730 intergenic not near genes chr2R 15714835 intergenic not near genes chr2R_29_15710001 chr2R_15710001 RAL-849 1766 chr2R 15786525 15786534 chr2R 15786652 15786661 6 127 10.0 27.0 18.5 0.3 136 chr2R 15786525 intron Zasp52 - chr2R 15786593 intron Zasp52 - chr2R 15786661 intron Zasp52 - chr2R_6_15785001 chr2R_15785001 RAL-849 1767 chr2R 15794826 15794899 chr2R 15794980 15795039 9 143 0.0 0.0 0.0 9.0 213 chr2R 15794826 intron,5` UTR Zasp52 -,tun + chr2R 15794932 intron,5` UTR Zasp52 -,tun + chr2R 15795039 intron,intron Zasp52 -,tun + chr2R_9_15790001 chr2R_15790001 RAL-849 1768 chr2R 15818896 15818966 chr2R 15819033 15819103 11 134 4.5 4.5 4.5 2.0 207 chr2R 15818896 intron tun + chr2R 15819000 intron tun + chr2R 15819103 intron tun + chr2R_11_15815001 chr2R_15815001 RAL-849 1769 chr2R 15869286 15869364 chr2R 15869416 15869494 18 126 10.0 4.0 7.0 2.2 208 chr2R 15869286 intergenic Rif1 -,sli - chr2R 15869390 intergenic sli -,Rif1 - chr2R 15869494 3` UTR sli - chr2R_18_15865001 chr2R_15865001 RAL-849 1770 chr2R 15891768 15891836 chr2R 15891894 15891962 19 126 8.5 9.5 9.0 1.9 194 chr2R 15891768 intron sli - chr2R 15891865 intron sli - chr2R 15891962 intron sli - chr2R_19_15890001 chr2R_15890001 RAL-849 1771 chr2R 15951767 15951836 chr2R 15952459 15952499 18 690 3.5 7.5 5.5 2.8 732 chr2R 15951767 intron Strn-Mlck - chr2R 15952133 intron Strn-Mlck - chr2R 15952499 intron Strn-Mlck - chr2R_18_15950001 chr2R_15950001 RAL-849 1772 chr2R 16013955 16013969 chr2R 16014125 16014140 6 168 48.5 39.5 44.0 0.1 185 chr2R 16013955 exon Prosbeta1 - chr2R 16014048 intron Prosbeta1 - chr2R 16014140 exon Prosbeta1 - chr2R_6_16010001 chr2R_16010001 RAL-849 1773 chr2R 16013970 16014022 chr2R 16014119 16014166 6 155 51.5 40.5 46.0 0.1 196 chr2R 16013970 exon Prosbeta1 - chr2R 16014068 intron Prosbeta1 - chr2R 16014166 exon Prosbeta1 - chr2R_6_16010001 chr2R_16010001 RAL-849 1774 chr2R 16037180 16037202 chr2R 16037307 16037329 9 125 22.5 13.0 17.8 0.5 149 chr2R 16037180 intron SP2353 + chr2R 16037254 intron SP2353 + chr2R 16037329 intron SP2353 + chr2R_9_16035001 chr2R_16035001 RAL-849 1775 chr2R 16037204 16037224 chr2R 16037305 16037351 9 117 18.0 13.0 15.5 0.5 147 chr2R 16037204 intron SP2353 + chr2R 16037278 intron SP2353 + chr2R 16037351 intron SP2353 + chr2R_9_16035001 chr2R_16035001 RAL-849 1776 chr2R 16054909 16054934 chr2R 16055042 16055049 4 128 23.0 18.5 20.8 0.2 140 chr2R 16054909 intron CG8405 + chr2R 16054979 intron CG8405 + chr2R 16055049 intron CG8405 + chr2R_4_16050001 chr2R_16050001 RAL-849 1777 chr2R 16054937 16054960 chr2R 16055038 16055093 8 122 14.5 15.5 15.0 0.5 156 chr2R 16054937 intron CG8405 + chr2R 16055015 intron CG8405 + chr2R 16055093 intron CG8405 + chr2R_8_16055001 chr2R_16055001 RAL-849 1778 chr2R 16217729 16217798 chr2R 16217855 16217924 37 125 9.0 8.5 8.8 3.8 195 chr2R 16217729 intron mrj - chr2R 16217826 intron mrj - chr2R 16217924 intron mrj - chr2R_37_16215001 chr2R_16215001 RAL-849 1779 chr2R 16352821 16352866 chr2R 16352954 16352999 13 133 5.5 7.0 6.2 1.8 178 chr2R 16352821 intergenic not near genes chr2R 16352910 intergenic not near genes chr2R 16352999 intergenic not near genes chr2R_13_16350001 chr2R_16350001 RAL-849 1780 chr2R 16380080 16380146 chr2R 16380228 16380294 13 145 6.0 4.0 5.0 2.2 214 chr2R 16380080 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380187 3` UTR CR45317 - chr2R 16380294 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_13_16380001 chr2R_16380001 RAL-849 1781 chr2R 16387489 16387500 chr2R 16388020 16388029 4 530 14.5 3.5 9.0 0.4 540 chr2R 16387489 intron Sema-2b + chr2R 16387759 intron Sema-2b + chr2R 16388029 intron Sema-2b + chr2R_4_16385001 chr2R_16385001 RAL-849 1782 chr2R 16387503 16387545 chr2R 16387993 16388044 11 514 5.0 3.5 4.2 2.1 541 chr2R 16387503 intron Sema-2b + chr2R 16387774 intron Sema-2b + chr2R 16388044 intron Sema-2b + chr2R_11_16385001 chr2R_16385001 RAL-849 1783 chr2R 16406695 16406745 chr2R 16406823 16406873 13 127 5.5 8.5 7.0 1.6 178 chr2R 16406695 intron Sema-2b + chr2R 16406784 intron Sema-2b + chr2R 16406873 intron Sema-2b + chr2R_13_16405001 chr2R_16405001 RAL-849 1784 chr2R 16511766 16511775 chr2R 16511904 16511928 4 149 15.5 2.0 8.8 0.4 162 chr2R 16511766 intron Sema-2a + chr2R 16511847 intron Sema-2a + chr2R 16511928 intron Sema-2a + chr2R_4_16510001 chr2R_16510001 RAL-849 1785 chr2R 16511776 16511829 chr2R 16511903 16511982 12 148 5.0 2.0 3.5 2.7 206 chr2R 16511776 intron Sema-2a + chr2R 16511879 intron Sema-2a + chr2R 16511982 intron Sema-2a + chr2R_12_16510001 chr2R_16510001 RAL-849 1786 chr2R 16518003 16518071 chr2R 16518129 16518197 20 126 5.0 6.0 5.5 3.1 194 chr2R 16518003 intron Sema-2a + chr2R 16518100 intron Sema-2a + chr2R 16518197 intron Sema-2a + chr2R_20_16515001 chr2R_16515001 RAL-849 1787 chr2R 16539605 16539656 chr2R 16544864 16544915 copia 21 5259 7.5 9.5 8.5 2.2 5310 chr2R 16539605 intergenic not near genes chr2R 16542260 intergenic not near genes chr2R 16544915 intergenic not near genes chr2R_21_16540001 chr2R_16540001 RAL-849 1788 chr2R 16571830 16571901 chr2R 16571975 16572046 29 145 6.0 10.5 8.2 3.2 216 chr2R 16571830 intergenic CG4927 + chr2R 16571938 intergenic CG4927 + chr2R 16572046 intergenic CG4927 + chr2R_29_16570001 chr2R_16570001 RAL-849 1789 chr2R 16676611 16676682 chr2R 16676778 16676848 28 166 7.0 6.0 6.5 3.7 237 chr2R 16676611 intron CG30463 - chr2R 16676730 intron CG30463 - chr2R 16676848 intron CG30463 - chr2R_28_16675001 chr2R_16675001 RAL-849 1790 chr2R 16701277 16701341 chr2R 16701454 16701518 24 177 5.5 7.0 6.2 3.3 241 chr2R 16701277 intron CG30463 - chr2R 16701398 intron CG30463 - chr2R 16701518 intron CG30463 - chr2R_24_16700001 chr2R_16700001 RAL-849 1791 chr2R 16737088 16737160 chr2R 16737238 16737310 29 148 8.5 6.0 7.2 3.5 222 chr2R 16737088 3` UTR CG43104 - chr2R 16737199 3` UTR CG43104 - chr2R 16737310 exon CG43104 - chr2R_29_16735001 chr2R_16735001 RAL-849 1792 chr2R 16775605 16775671 chr2R 16775922 16775988 31 316 4.5 8.0 6.2 4.3 383 chr2R 16775605 3` UTR Arp53D + chr2R 16775796 intergenic Arp53D + chr2R 16775988 intergenic Arp53D + chr2R_31_16775001 chr2R_16775001 RAL-849 1793 chr2R 16787427 16787495 chr2R 16787559 16787627 17 132 7.5 7.0 7.2 2.1 200 chr2R 16787427 intron CG5522 + chr2R 16787527 intron CG5522 + chr2R 16787627 intron CG5522 + chr2R_17_16785001 chr2R_16785001 RAL-849 1794 chr2R 16892273 16892306 chr2R 16892415 16892448 5 142 4.0 5.0 4.5 0.9 175 chr2R 16892273 intron CG8910 - chr2R 16892360 intron CG8910 - chr2R 16892448 intron CG8910 - chr2R_5_16890001 chr2R_16890001 RAL-849 1795 chr2R 16893729 16893803 chr2R 16893862 16893936 30 132 6.5 6.0 6.2 4.2 207 chr2R 16893729 intron CG8910 - chr2R 16893832 intron CG8910 - chr2R 16893936 intron CG8910 - chr2R_30_16890001 chr2R_16890001 RAL-849 1796 chr2R 16902715 16902784 chr2R 16902886 16902950 33 170 7.0 9.5 8.2 3.6 235 chr2R 16902715 intergenic not near genes chr2R 16902832 intergenic not near genes chr2R 16902950 intergenic not near genes chr2R_33_16900001 chr2R_16900001 RAL-849 1797 chr2R 16918055 16918130 chr2R 16918583 16918650 27 524 10.5 0.0 5.2 4.4 595 chr2R 16918055 intergenic not near genes chr2R 16918352 intergenic not near genes chr2R 16918650 intergenic not near genes chr2R_27_16915001 chr2R_16915001 RAL-849 1798 chr2R 16929854 16929877 chr2R 16929986 16930009 4 132 12.0 12.5 12.2 0.3 155 chr2R 16929854 intron Pkc53E + chr2R 16929932 intron Pkc53E + chr2R 16930009 intron Pkc53E + chr2R_4_16925001 chr2R_16925001 RAL-849 1799 chr2R 17098616 17098650 chr2R 17098755 17098789 10 139 13.5 11.0 12.2 0.8 173 chr2R 17098616 intergenic GstS1 - chr2R 17098702 intergenic GstS1 - chr2R 17098789 intergenic GstS1 - chr2R_10_17095001 chr2R_17095001 RAL-849 1800 chr2R 17139354 17139400 chr2R 17139544 17139590 8 190 8.5 7.0 7.8 0.9 236 chr2R 17139354 3` UTR CG11395 + chr2R 17139472 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139590 3` UTR,3` UTR CG11395 +,CG43103 - chr2R_8_17135001 chr2R_17135001 RAL-849 1801 chr2R 17147199 17147261 chr2R 17152280 17152342 jockey 26 5081 8.5 10.5 9.5 2.5 5143 chr2R 17147199 intergenic not near genes chr2R 17149770 intergenic not near genes chr2R 17152342 intergenic not near genes chr2R_26_17145001 chr2R_17145001 RAL-849 1802 chr2R 17161306 17161364 chr2R 17161563 17161618 10 254 8.0 4.0 6.0 1.4 312 chr2R 17161306 intergenic CG30457 - chr2R 17161462 intergenic not near genes chr2R 17161618 intergenic not near genes chr2R_10_17160001 chr2R_17160001 RAL-849 1803 chr2R 17176352 17176379 chr2R 17182592 17182619 diver 12 6240 0.0 13.5 6.8 1.5 6267 chr2R 17176352 intergenic not near genes chr2R 17179486 intergenic not near genes chr2R 17182619 intergenic not near genes chr2R_12_17175001 chr2R_17175001 RAL-849 1804 chr2R 17236472 17236510 chr2R 17241726 17241764 copia 12 5254 12.5 8.5 10.5 1.0 5292 chr2R 17236472 intron mbl + chr2R 17239118 intron mbl + chr2R 17241764 intron mbl + chr2R_12_17235001 chr2R_17235001 RAL-849 1805 chr2R 17236511 17236522 chr2R 17241719 17241776 copia 5 5245 9.5 6.5 8.0 0.6 5265 chr2R 17236511 intron mbl + chr2R 17239144 intron mbl + chr2R 17241776 intron mbl + chr2R_5_17235001 chr2R_17235001 RAL-849 1806 chr2R 17259082 17259108 chr2R 17259250 17259276 5 168 8.5 4.0 6.2 0.7 194 chr2R 17259082 intron mbl + chr2R 17259179 intron mbl + chr2R 17259276 intron mbl + chr2R_5_17255001 chr2R_17255001 RAL-849 1807 chr2R 17263273 17263327 chr2R 17263404 17263457 11 131 3.0 3.0 3.0 2.8 184 chr2R 17263273 intron mbl + chr2R 17263365 intron mbl + chr2R 17263457 intron mbl + chr2R_11_17260001 chr2R_17260001 RAL-849 1808 chr2R 17389227 17389238 chr2R 17389368 17389379 5 141 15.5 9.0 12.2 0.4 152 chr2R 17389227 intergenic CR44344 - chr2R 17389303 intergenic CR44344 - chr2R 17389379 intergenic CR44344 - chr2R_5_17385001 chr2R_17385001 RAL-849 1809 chr2R 17389240 17389295 chr2R 17389360 17389431 21 138 7.5 8.0 7.8 2.4 191 chr2R 17389240 intergenic CR44344 - chr2R 17389336 intergenic CR44344 - chr2R 17389431 intergenic CR44344 - chr2R_21_17385001 chr2R_17385001 RAL-849 1810 chr2R 17458961 17459027 chr2R 17459096 17459162 25 135 11.0 10.0 10.5 2.2 201 chr2R 17458961 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459162 intron CG14478 + chr2R_25_17455001 chr2R_17455001 RAL-849 1811 chr2R 17470293 17470349 chr2R 17470428 17470483 8 134 3.0 0.5 1.8 2.9 190 chr2R 17470293 intron qkr54B + chr2R 17470388 intron qkr54B + chr2R 17470483 intron qkr54B + chr2R_8_17470001 chr2R_17470001 RAL-849 1812 chr2R 17485877 17485940 chr2R 17490697 17490760 F-element 17 4820 8.0 7.0 7.5 2.0 4883 chr2R 17485877 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488318 intron NT5E-2 + chr2R 17490760 intron NT5E-2 + chr2R_17_17485001 chr2R_17485001 RAL-849 1813 chr2R 17500613 17500684 chr2R 17500739 17500810 17 126 7.5 5.0 6.2 2.4 197 chr2R 17500613 intergenic not near genes chr2R 17500712 intergenic not near genes chr2R 17500810 intergenic not near genes chr2R_17_17500001 chr2R_17500001 RAL-849 1814 chr2R 17627707 17627780 chr2R 17628084 17628157 37 376 6.5 9.5 8.0 4.1 450 chr2R 17627707 intron CG10936 - chr2R 17627932 intron CG10936 - chr2R 17628157 intron CG10936 - chr2R_37_17625001 chr2R_17625001 RAL-849 1815 chr2R 17643956 17644019 chr2R 17644082 17644149 6 127 0.0 7.5 3.8 1.2 193 chr2R 17643956 intergenic not near genes chr2R 17644052 intergenic not near genes chr2R 17644149 intergenic not near genes chr2R_6_17640001 chr2R_17640001 RAL-849 1816 chr2R 17679574 17679591 chr2R 17679751 17679768 6 176 1.5 4.5 3.0 1.5 194 chr2R 17679574 intron Sema-1b - chr2R 17679671 intron Sema-1b - chr2R 17679768 intron Sema-1b - chr2R_6_17675001 chr2R_17675001 RAL-849 1817 chr2R 17709935 17710004 chr2R 17710076 17710145 11 138 3.5 3.0 3.2 2.6 210 chr2R 17709935 intron CG6424 - chr2R 17710040 intron CG6424 - chr2R 17710145 intron CG6424 - chr2R_11_17710001 chr2R_17710001 RAL-849 1818 chr2R 17782322 17782386 chr2R 17783575 17783639 pogo 17 1253 4.5 7.0 5.8 2.5 1317 chr2R 17782322 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783639 intergenic mir-31a - chr2R_17_17780001 chr2R_17780001 RAL-849 1819 chr2R 17783982 17784051 chr2R 17784273 17784342 pogo 22 290 9.5 12.0 10.8 1.9 360 chr2R 17783982 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784342 intergenic mir-31a - chr2R_22_17780001 chr2R_17780001 RAL-849 1820 chr2R 17785042 17785071 chr2R 17785175 17785209 5 136 10.0 9.5 9.8 0.5 167 chr2R 17785042 intergenic not near genes chr2R 17785126 intergenic not near genes chr2R 17785209 intergenic not near genes chr2R_5_17785001 chr2R_17785001 RAL-849 1821 chr2R 17885371 17885377 chr2R 17885539 17885545 4 168 16.0 7.5 11.8 0.3 174 chr2R 17885371 intron Elk + chr2R 17885458 intron Elk + chr2R 17885545 intron Elk + chr2R_4_17885001 chr2R_17885001 RAL-849 1822 chr2R 17885385 17885425 chr2R 17885553 17885593 10 168 9.5 8.5 9.0 1.0 208 chr2R 17885385 intron Elk + chr2R 17885489 intron Elk + chr2R 17885593 intron Elk + chr2R_10_17885001 chr2R_17885001 RAL-849 1823 chr2R 17897421 17897487 chr2R 17897578 17897636 30 160 5.5 4.0 4.8 5.2 215 chr2R 17897421 intron Elk + chr2R 17897528 intron Elk + chr2R 17897636 intron Elk + chr2R_30_17895001 chr2R_17895001 RAL-849 1824 chr2R 17911581 17911624 chr2R 17911707 17911750 6 126 0.0 7.0 3.5 1.3 169 chr2R 17911581 intron Elk + chr2R 17911666 intron Elk + chr2R 17911750 intron Elk + chr2R_6_17910001 chr2R_17910001 RAL-849 1825 chr2R 17918125 17918136 chr2R 17918252 17918263 10 127 12.5 0.0 6.2 1.4 138 chr2R 17918125 intron Elk + chr2R 17918194 intron Elk + chr2R 17918263 intron Elk + chr2R_10_17915001 chr2R_17915001 RAL-849 1826 chr2R 17918137 17918150 chr2R 17918249 17918277 9 125 10.5 1.0 5.8 1.3 140 chr2R 17918137 intron Elk + chr2R 17918207 intron Elk + chr2R 17918277 intron Elk + chr2R_9_17915001 chr2R_17915001 RAL-849 1827 chr2R 17921404 17921458 chr2R 17921536 17921588 14 132 0.0 6.0 3.0 3.5 184 chr2R 17921404 intron Elk + chr2R 17921496 intron Elk + chr2R 17921588 intron Elk + chr2R_14_17920001 chr2R_17920001 RAL-849 1828 chr2R 17963278 17963290 chr2R 17963461 17963468 5 182 17.5 11.5 14.5 0.3 190 chr2R 17963278 intergenic not near genes chr2R 17963373 intergenic not near genes chr2R 17963468 intergenic not near genes chr2R_5_17960001 chr2R_17960001 RAL-849 1829 chr2R 18045626 18045695 chr2R 18046028 18046097 jockey 20 400 5.0 5.0 5.0 3.3 471 chr2R 18045626 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046097 intergenic CG5767 - chr2R_20_18045001 chr2R_18045001 RAL-849 1830 chr2R 18111642 18111702 chr2R 18115560 18115620 F-element 14 3917 7.5 7.5 7.5 1.6 3978 chr2R 18111642 intergenic not near genes chr2R 18113631 intergenic not near genes chr2R 18115620 intergenic not near genes chr2R_14_18110001 chr2R_18110001 RAL-849 1831 chr2R 18141834 18141862 chr2R 18141967 18142000 17 134 6.5 8.5 7.5 2.0 166 chr2R 18141834 intron pAbp + chr2R 18141917 intron pAbp + chr2R 18142000 intron pAbp + chr2R_17_18140001 chr2R_18140001 RAL-849 1832 chr2R 18190822 18190845 chr2R 18190947 18190971 9 126 4.0 8.5 6.2 1.2 149 chr2R 18190822 intron CG33958 - chr2R 18190896 intron CG33958 - chr2R 18190971 intron CG33958 - chr2R_9_18190001 chr2R_18190001 RAL-849 1833 chr2R 18308244 18308318 chr2R 18308400 18308469 22 156 6.5 8.0 7.2 2.7 225 chr2R 18308244 intron sbb - chr2R 18308356 intron sbb - chr2R 18308469 intron sbb - chr2R_22_18305001 chr2R_18305001 RAL-849 1834 chr2R 18314391 18314432 chr2R 18314519 18314560 12 127 0.5 8.5 4.5 2.2 169 chr2R 18314391 intron sbb - chr2R 18314476 intron sbb - chr2R 18314560 intron sbb - chr2R_12_18310001 chr2R_18310001 RAL-849 1835 chr2R 18318332 18318345 chr2R 18318463 18318476 8 131 4.0 0.0 2.0 2.7 144 chr2R 18318332 intron sbb - chr2R 18318404 intron sbb - chr2R 18318476 intron sbb - chr2R_8_18315001 chr2R_18315001 RAL-849 1836 chr2R 18358352 18358413 chr2R 18372613 18372675 roo 20 14261 9.5 14.5 12.0 1.5 14323 chr2R 18358352 intergenic not near genes chr2R 18365514 intergenic not near genes chr2R 18372675 intergenic not near genes chr2R_20_18365001 chr2R_18365001 RAL-849 1837 chr2R 18376693 18376760 chr2R 18376833 18376900 24 139 6.5 7.5 7.0 3.0 207 chr2R 18376693 intergenic not near genes chr2R 18376796 intergenic not near genes chr2R 18376900 intergenic not near genes chr2R_24_18375001 chr2R_18375001 RAL-849 1838 chr2R 18377335 18377402 chr2R 18377935 18378002 19 600 7.0 7.5 7.2 2.3 667 chr2R 18377335 intergenic CR42736 + chr2R 18377668 intron CR42736 + chr2R 18378002 intron CR42736 + chr2R_19_18375001 chr2R_18375001 RAL-849 1839 chr2R 18390826 18390879 chr2R 18390963 18391014 14 136 7.0 4.0 5.5 2.2 188 chr2R 18390826 intergenic CG15068 - chr2R 18390920 intergenic CG15068 - chr2R 18391014 intergenic CG15068 - chr2R_14_18390001 chr2R_18390001 RAL-849 1840 chr2R 18391922 18391989 chr2R 18392053 18392120 12 131 5.0 2.0 3.5 2.7 198 chr2R 18391922 intergenic not near genes chr2R 18392021 intergenic not near genes chr2R 18392120 intergenic not near genes chr2R_12_18390001 chr2R_18390001 RAL-849 1841 chr2R 18405706 18405785 chr2R 18405837 18405915 10 130 7.5 3.0 5.2 1.6 209 chr2R 18405706 intergenic GstE6 +,GstE5 + chr2R 18405810 intergenic GstE6 +,GstE5 + chr2R 18405915 intergenic GstE6 + chr2R_10_18405001 chr2R_18405001 RAL-849 1842 chr2R 18471892 18471917 chr2R 18472018 18472043 8 126 6.0 3.5 4.8 1.4 151 chr2R 18471892 intron CG30116 - chr2R 18471968 intron CG30116 - chr2R 18472043 intron CG30116 - chr2R_8_18470001 chr2R_18470001 RAL-849 1843 chr2R 18477697 18477758 chr2R 18477836 18477891 12 126 0.5 8.0 4.2 2.3 194 chr2R 18477697 intron CG30116 - chr2R 18477794 intron CG30116 - chr2R 18477891 intron CG30116 - chr2R_12_18475001 chr2R_18475001 RAL-849 1844 chr2R 18487799 18487822 chr2R 18495301 18495324 blood 9 7502 10.5 5.0 7.8 1.0 7525 chr2R 18487799 intron CG30116 - chr2R 18491562 intron CG30116 - chr2R 18495324 intron CG30116 - chr2R_9_18490001 chr2R_18490001 RAL-849 1845 chr2R 18553401 18553454 chr2R 18553526 18553584 15 130 7.0 2.0 4.5 2.7 183 chr2R 18553401 intergenic not near genes chr2R 18553492 intergenic not near genes chr2R 18553584 intergenic not near genes chr2R_15_18550001 chr2R_18550001 RAL-849 1846 chr2R 18575750 18575809 chr2R 18581988 18582043 3S18 14 6227 7.0 4.5 5.8 2.1 6293 chr2R 18575750 intron GEFmeso - chr2R 18578896 intron GEFmeso - chr2R 18582043 intron GEFmeso - chr2R_14_18575001 chr2R_18575001 RAL-849 1847 chr2R 18575810 18575811 chr2R 18581986 18582049 3S18 10 6208 7.0 4.0 5.5 1.5 6239 chr2R 18575810 intron GEFmeso - chr2R 18578930 intron GEFmeso - chr2R 18582049 intron GEFmeso - chr2R_10_18575001 chr2R_18575001 RAL-849 1848 chr2R 18575812 18575821 chr2R 18581984 18582059 3S18 7 6223 6.0 4.0 5.0 1.2 6247 chr2R 18575812 intron GEFmeso - chr2R 18578936 intron GEFmeso - chr2R 18582059 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-849 1849 chr2R 18585772 18585815 chr2R 18585887 18585943 14 125 9.5 12.0 10.8 1.2 171 chr2R 18585772 intron GEFmeso - chr2R 18585858 intron GEFmeso - chr2R 18585943 intron GEFmeso - chr2R_14_18585001 chr2R_18585001 RAL-849 1850 chr2R 18590822 18590896 chr2R 18600024 18600038 roo 26 9197 9.5 7.0 8.2 2.8 9216 chr2R 18590822 intron GEFmeso - chr2R 18595430 intron GEFmeso - chr2R 18600038 intron GEFmeso - chr2R_26_18595001 chr2R_18595001 RAL-849 1851 chr2R 18620395 18620414 chr2R 18620533 18620552 12 138 17.5 8.5 13.0 0.9 157 chr2R 18620395 intergenic Atg7 - chr2R 18620474 3` UTR Atg7 - chr2R 18620552 3` UTR Atg7 - chr2R_12_18620001 chr2R_18620001 RAL-849 1852 chr2R 18646363 18646436 chr2R 18646558 18646631 33 195 8.5 11.5 10.0 3.0 268 chr2R 18646363 intron SP2637 - chr2R 18646497 intron SP2637 - chr2R 18646631 intron SP2637 - chr2R_33_18645001 chr2R_18645001 RAL-849 1853 chr2R 18666046 18666069 chr2R 18666184 18666207 10 138 5.0 9.0 7.0 1.2 161 chr2R 18666046 intergenic CG33136 - chr2R 18666126 intergenic CG33136 - chr2R 18666207 intergenic CG33136 - chr2R_10_18665001 chr2R_18665001 RAL-849 1854 chr2R 18692858 18692882 chr2R 18692995 18693019 13 137 17.0 4.0 10.5 1.1 161 chr2R 18692858 exon Sik3 + chr2R 18692938 intron Sik3 + chr2R 18693019 intron Sik3 + chr2R_13_18690001 chr2R_18690001 RAL-849 1855 chr2R 18692887 18692918 chr2R 18692994 18693054 5 130 9.0 4.0 6.5 0.7 167 chr2R 18692887 intron Sik3 + chr2R 18692970 intron Sik3 + chr2R 18693054 intron Sik3 + chr2R_5_18690001 chr2R_18690001 RAL-849 1856 chr2R 18711380 18711453 chr2R 18711507 18711580 30 127 8.5 8.0 8.2 3.3 200 chr2R 18711380 intergenic pncr016:2R + chr2R 18711480 5` UTR pncr016:2R + chr2R 18711580 5` UTR pncr016:2R + chr2R_30_18710001 chr2R_18710001 RAL-849 1857 chr2R 18736744 18736778 chr2R 18736919 18736953 14 174 8.0 7.5 7.8 1.6 209 chr2R 18736744 intron Hs3st-A + chr2R 18736848 intron Hs3st-A + chr2R 18736953 intron Hs3st-A + chr2R_14_18735001 chr2R_18735001 RAL-849 1858 chr2R 18769603 18769731 chr2R 18769914 18769988 11 306 0.0 3.0 1.5 4.4 385 chr2R 18769603 intron Mctp + chr2R 18769796 intron Mctp + chr2R 18769988 intron Mctp + chr2R_11_18765001 chr2R_18765001 RAL-849 1859 chr2R 18778562 18778592 chr2R 18778710 18778740 17 147 12.5 0.0 6.2 2.4 178 chr2R 18778562 intergenic not near genes chr2R 18778651 intergenic not near genes chr2R 18778740 intergenic not near genes chr2R_17_18775001 chr2R_18775001 RAL-849 1860 chr2R 18785873 18785940 chr2R 18786002 18786069 23 129 9.0 8.0 8.5 2.4 196 chr2R 18785873 intron CG15080 + chr2R 18785971 intron CG15080 + chr2R 18786069 intron CG15080 + chr2R_23_18785001 chr2R_18785001 RAL-849 1861 chr2R 18808116 18808183 chr2R 18808242 18808309 14 124 6.0 3.0 4.5 2.5 193 chr2R 18808116 intergenic CG15096 - chr2R 18808212 intergenic CG15096 - chr2R 18808309 intergenic CG15096 - chr2R_14_18805001 chr2R_18805001 RAL-849 1862 chr2R 18857358 18857397 chr2R 18857484 18857523 9 126 13.5 12.5 13.0 0.6 165 chr2R 18857358 exon Jheh2 - chr2R 18857440 intron Jheh2 - chr2R 18857523 intron Jheh2 - chr2R_9_18855001 chr2R_18855001 RAL-849 1863 chr2R 18862265 18862399 chr2R 18862398 18862534 6 151 0.0 0.0 0.0 6.0 269 chr2R 18862265 intergenic Jheh3 - chr2R 18862400 intergenic Jheh3 -,CG43069 + chr2R 18862534 intergenic CG43069 +,Jheh3 - chr2R_6_18860001 chr2R_18860001 RAL-849 1864 chr2R 18921728 18921793 chr2R 18921981 18922051 18 256 3.5 3.5 3.5 4.0 323 chr2R 18921728 intron sano + chr2R 18921890 intron sano + chr2R 18922051 intron sano + chr2R_18_18920001 chr2R_18920001 RAL-849 1865 chr2R 18926454 18926516 chr2R 18926591 18926653 28 137 7.5 0.0 3.8 5.8 199 chr2R 18926454 intron sano + chr2R 18926554 intron sano + chr2R 18926653 intron sano + chr2R_28_18925001 chr2R_18925001 RAL-849 1866 chr2R 18928639 18928650 chr2R 18928776 18928786 4 136 16.0 9.5 12.8 0.3 147 chr2R 18928639 intron sano + chr2R 18928712 intron sano + chr2R 18928786 intron sano + chr2R_4_18925001 chr2R_18925001 RAL-849 1867 chr2R 18928661 18928701 chr2R 18928771 18928822 8 115 6.5 8.5 7.5 0.9 161 chr2R 18928661 intron sano + chr2R 18928742 intron sano + chr2R 18928822 intron sano + chr2R_8_18925001 chr2R_18925001 RAL-849 1868 chr2R 18948003 18948084 chr2R 18948139 18948219 11 136 4.5 2.0 3.2 2.6 216 chr2R 18948003 intron sano + chr2R 18948111 intron sano + chr2R 18948219 intron sano + chr2R_11_18945001 chr2R_18945001 RAL-849 1869 chr2R 18964884 18964906 chr2R 18965010 18965032 7 126 17.0 9.5 13.2 0.5 148 chr2R 18964884 intergenic not near genes chr2R 18964958 intergenic not near genes chr2R 18965032 intergenic not near genes chr2R_7_18960001 chr2R_18960001 RAL-849 1870 chr2R 19010697 19010769 chr2R 19010864 19010936 19 158 9.0 6.5 7.8 2.2 239 chr2R 19010697 intergenic not near genes chr2R 19010816 intergenic not near genes chr2R 19010936 intergenic not near genes chr2R_19_19010001 chr2R_19010001 RAL-849 1871 chr2R 19015397 19015451 chr2R 19015535 19015589 21 135 9.0 11.0 10.0 1.9 192 chr2R 19015397 intergenic not near genes chr2R 19015493 intergenic not near genes chr2R 19015589 intergenic not near genes chr2R_21_19015001 chr2R_19015001 RAL-849 1872 chr2R 19025260 19025331 chr2R 19025543 19025599 12 279 0.0 6.0 3.0 3.0 339 chr2R 19025260 intron 5-HT1B - chr2R 19025430 intron 5-HT1B - chr2R 19025599 intron 5-HT1B - chr2R_12_19025001 chr2R_19025001 RAL-849 1873 chr2R 19025996 19026059 chr2R 19026186 19026249 18 190 10.5 6.5 8.5 1.9 253 chr2R 19025996 exon 5-HT1B - chr2R 19026122 intron 5-HT1B - chr2R 19026249 intron 5-HT1B - chr2R_18_19025001 chr2R_19025001 RAL-849 1874 chr2R 19042646 19042698 chr2R 19042780 19042824 18 125 14.5 8.0 11.2 1.5 178 chr2R 19042646 intergenic not near genes chr2R 19042735 intergenic not near genes chr2R 19042824 intergenic not near genes chr2R_18_19040001 chr2R_19040001 RAL-849 1875 chr2R 19076345 19076405 chr2R 19076488 19076561 28 147 8.5 9.5 9.0 2.8 216 chr2R 19076345 intron 5-HT1A + chr2R 19076453 intron 5-HT1A + chr2R 19076561 intron 5-HT1A + chr2R_28_19075001 chr2R_19075001 RAL-849 1876 chr2R 19103360 19103428 chr2R 19103500 19103560 13 133 8.0 4.0 6.0 1.9 200 chr2R 19103360 intron 5-HT1A + chr2R 19103460 intron 5-HT1A + chr2R 19103560 intron 5-HT1A + chr2R_13_19100001 chr2R_19100001 RAL-849 1877 chr2R 19104641 19104708 chr2R 19104807 19104874 13 166 7.5 7.5 7.5 1.5 233 chr2R 19104641 intron 5-HT1A + chr2R 19104758 intron 5-HT1A + chr2R 19104874 intron 5-HT1A + chr2R_13_19100001 chr2R_19100001 RAL-849 1878 chr2R 19171318 19171391 chr2R 19171571 19171644 37 250 6.0 11.0 8.5 3.9 326 chr2R 19171318 exon CG10737 + chr2R 19171481 intron CG10737 + chr2R 19171644 intron CG10737 + chr2R_37_19170001 chr2R_19170001 RAL-849 1879 chr2R 19185603 19185671 chr2R 19185851 19185926 21 248 10.5 10.0 10.2 1.9 323 chr2R 19185603 intron hppy + chr2R 19185764 intron hppy + chr2R 19185926 intron hppy + chr2R_21_19185001 chr2R_19185001 RAL-849 1880 chr2R 19300923 19300988 chr2R 19301046 19301121 34 132 0.0 10.0 5.0 5.7 198 chr2R 19300923 intron Tab2 + chr2R 19301022 intron Tab2 + chr2R 19301121 intron Tab2 + chr2R_34_19300001 chr2R_19300001 RAL-849 1881 chr2R 19319830 19319838 chr2R 19320033 19320041 5 203 16.0 10.0 13.0 0.4 211 chr2R 19319830 intron Rgk1 - chr2R 19319936 intron Rgk1 - chr2R 19320041 intron Rgk1 - chr2R_5_19315001 chr2R_19315001 RAL-849 1882 chr2R 19319841 19319860 chr2R 19320032 19320063 16 201 11.0 9.5 10.2 1.4 222 chr2R 19319841 intron Rgk1 - chr2R 19319952 intron Rgk1 - chr2R 19320063 intron Rgk1 - chr2R_16_19315001 chr2R_19315001 RAL-849 1883 chr2R 19319867 19319898 chr2R 19320021 19320091 16 196 4.0 7.5 5.8 2.4 224 chr2R 19319867 intron Rgk1 - chr2R 19319979 intron Rgk1 - chr2R 19320091 intron Rgk1 - chr2R_16_19315001 chr2R_19315001 RAL-849 1884 chr2R 19351654 19351712 chr2R 19352537 19352595 23 882 7.5 9.0 8.2 2.5 941 chr2R 19351654 intron Rgk1 - chr2R 19352124 intron Rgk1 - chr2R 19352595 intron Rgk1 - chr2R_23_19350001 chr2R_19350001 RAL-849 1885 chr2R 19363143 19363217 chr2R 19363269 19363343 11 126 3.0 0.0 1.5 4.4 200 chr2R 19363143 intergenic CG10051 + chr2R 19363243 intergenic CG10051 + chr2R 19363343 intergenic CG10051 + chr2R_11_19360001 chr2R_19360001 RAL-849 1886 chr2R 19385234 19385272 chr2R 19385567 19385605 9 333 7.5 2.5 5.0 1.5 371 chr2R 19385234 intergenic CG10073 + chr2R 19385420 intergenic CG10073 + chr2R 19385605 intergenic CG10081 + chr2R_9_19385001 chr2R_19385001 RAL-849 1887 chr2R 19535763 19535776 chr2R 19535892 19535904 7 129 18.5 9.5 14.0 0.5 141 chr2R 19535763 intron sm - chr2R 19535834 intron sm - chr2R 19535904 intron sm - chr2R_7_19535001 chr2R_19535001 RAL-849 1888 chr2R 19536423 19536496 chr2R 19536555 19536628 25 132 11.0 7.5 9.2 2.5 205 chr2R 19536423 intron sm - chr2R 19536526 intron sm - chr2R 19536628 intron sm - chr2R_25_19535001 chr2R_19535001 RAL-849 1889 chr2R 19560720 19560774 chr2R 19560865 19560919 16 144 9.0 5.5 7.2 2.0 199 chr2R 19560720 intron sm - chr2R 19560820 intron sm - chr2R 19560919 intron sm - chr2R_16_19560001 chr2R_19560001 RAL-849 1890 chr2R 19575518 19575580 chr2R 19575646 19575708 28 127 7.0 3.0 5.0 4.7 190 chr2R 19575518 intron sm - chr2R 19575613 intron sm - chr2R 19575708 intron sm - chr2R_28_19575001 chr2R_19575001 RAL-849 1891 chr2R 19588705 19588775 chr2R 19588833 19588903 28 128 5.5 8.0 6.8 3.6 198 chr2R 19588705 intron sm - chr2R 19588804 intron sm - chr2R 19588903 intron sm - chr2R_28_19585001 chr2R_19585001 RAL-849 1892 chr2R 19701462 19701541 chr2R 19701596 19701675 24 134 4.0 3.0 3.5 5.3 213 chr2R 19701462 intergenic Obp56c - chr2R 19701568 intergenic Obp56c - chr2R 19701675 intergenic not near genes chr2R_24_19700001 chr2R_19700001 RAL-849 1893 chr2R 19715817 19715856 chr2R 19723331 19723375 blood 20 7517 11.5 12.0 11.8 1.6 7558 chr2R 19715817 intergenic not near genes chr2R 19719596 intergenic not near genes chr2R 19723375 intergenic not near genes chr2R_20_19715001 chr2R_19715001 RAL-849 1894 chr2R 19776553 19776614 chr2R 19779926 19779987 jockey 24 3372 11.5 8.0 9.8 2.2 3434 chr2R 19776553 intergenic not near genes chr2R 19778270 intergenic not near genes chr2R 19779987 intergenic not near genes chr2R_24_19775001 chr2R_19775001 RAL-849 1895 chr2R 19893401 19893475 chr2R 19893554 19893628 27 150 8.0 11.0 9.5 2.6 227 chr2R 19893401 intergenic not near genes chr2R 19893514 intergenic not near genes chr2R 19893628 intergenic not near genes chr2R_27_19890001 chr2R_19890001 RAL-849 1896 chr2R 19908894 19908972 chr2R 19909022 19909100 17 125 11.0 6.5 8.8 1.7 206 chr2R 19908894 intergenic not near genes chr2R 19908997 intergenic not near genes chr2R 19909100 intergenic not near genes chr2R_17_19905001 chr2R_19905001 RAL-849 1897 chr2R 19943222 19943295 chr2R 19943382 19943454 14 159 0.5 9.0 4.8 2.4 232 chr2R 19943222 intergenic not near genes chr2R 19943338 intergenic not near genes chr2R 19943454 intergenic not near genes chr2R_14_19940001 chr2R_19940001 RAL-849 1898 chr2R 19957405 19957454 chr2R 19962637 19962661 copia 16 5239 3.0 9.0 6.0 2.3 5256 chr2R 19957405 intergenic CG44623 + chr2R 19960033 intergenic not near genes chr2R 19962661 intergenic not near genes chr2R_16_19960001 chr2R_19960001 RAL-849 1899 chr2R 20019172 20019211 chr2R 20019315 20019356 12 139 8.5 11.0 9.8 1.1 184 chr2R 20019172 intergenic not near genes chr2R 20019264 intergenic not near genes chr2R 20019356 intergenic not near genes chr2R_12_20015001 chr2R_20015001 RAL-849 1900 chr2R 20069206 20069250 chr2R 20071894 20071938 opus 15 2687 0.0 7.5 3.8 3.1 2732 chr2R 20069206 intergenic not near genes chr2R 20070572 intergenic not near genes chr2R 20071938 intergenic not near genes chr2R_15_20070001 chr2R_20070001 RAL-849 1901 chr2R 20080599 20080625 chr2R 20080726 20080752 14 127 1.5 16.0 8.8 1.4 153 chr2R 20080599 intergenic not near genes chr2R 20080676 intergenic not near genes chr2R 20080752 intergenic not near genes chr2R_14_20080001 chr2R_20080001 RAL-849 1902 chr2R 20087979 20088025 chr2R 20088137 20088183 1360 12 158 4.5 7.5 6.0 1.7 204 chr2R 20087979 intergenic not near genes chr2R 20088081 intergenic not near genes chr2R 20088183 intergenic not near genes chr2R_12_20085001 chr2R_20085001 RAL-849 1903 chr2R 20118838 20118888 chr2R 20118965 20119026 20 134 0.5 6.5 3.5 4.4 188 chr2R 20118838 intergenic not near genes chr2R 20118932 intergenic not near genes chr2R 20119026 intergenic not near genes chr2R_20_20115001 chr2R_20115001 RAL-849 1904 chr2R 20118890 20118897 chr2R 20118962 20118984 5 115 0.0 6.5 3.2 1.2 94 chr2R 20118890 intergenic not near genes chr2R 20118937 intergenic not near genes chr2R 20118984 intergenic not near genes chr2R_5_20115001 chr2R_20115001 RAL-849 1905 chr2R 20368471 20368496 chr2R 20377684 20377709 roo 5 9213 10.0 11.0 10.5 0.4 9238 chr2R 20368471 intergenic not near genes chr2R 20373090 intergenic not near genes chr2R 20377709 intergenic not near genes chr2R_5_20370001 chr2R_20370001 RAL-849 1906 chr2R 20395005 20395052 chr2R 20395231 20395268 14 223 4.0 2.5 3.2 3.3 263 chr2R 20395005 intergenic not near genes chr2R 20395136 intergenic not near genes chr2R 20395268 intergenic not near genes chr2R_14_20395001 chr2R_20395001 RAL-849 1907 chr2R 20411409 20411439 chr2R 20411550 20411580 14 139 11.5 3.5 7.5 1.6 171 chr2R 20411409 intergenic not near genes chr2R 20411494 intergenic not near genes chr2R 20411580 intergenic not near genes chr2R_14_20410001 chr2R_20410001 RAL-849 1908 chr2R 20454390 20454461 chr2R 20455044 20455129 10 664 8.0 1.5 4.8 1.7 739 chr2R 20454390 intron CG12484 + chr2R 20454760 intron CG12484 + chr2R 20455129 intron CG12484 + chr2R_10_20450001 chr2R_20450001 RAL-849 1909 chr2R 20506912 20506931 chr2R 20507044 20507063 6 131 0.0 4.0 2.0 2.0 151 chr2R 20506912 intergenic CR44645 + chr2R 20506988 intergenic CR44645 + chr2R 20507063 intergenic CR44645 + chr2R_6_20505001 chr2R_20505001 RAL-849 1910 chr2R 20522995 20523008 chr2R 20523155 20523164 4 158 26.5 12.0 19.2 0.2 169 chr2R 20522995 intergenic not near genes chr2R 20523080 intergenic not near genes chr2R 20523164 intergenic not near genes chr2R_4_20520001 chr2R_20520001 RAL-849 1911 chr2R 20523024 20523065 chr2R 20523148 20523226 21 151 7.0 10.5 8.8 2.1 202 chr2R 20523024 intergenic not near genes chr2R 20523125 intergenic not near genes chr2R 20523226 intergenic not near genes chr2R_21_20520001 chr2R_20520001 RAL-849 1912 chr2R 20541945 20542006 chr2R 20542073 20542134 15 128 6.5 10.5 8.5 1.6 189 chr2R 20541945 intergenic not near genes chr2R 20542040 intergenic not near genes chr2R 20542134 intergenic not near genes chr2R_15_20540001 chr2R_20540001 RAL-849 1913 chr2R 20555288 20555336 chr2R 20555430 20555478 18 141 8.5 5.0 6.8 2.3 190 chr2R 20555288 intergenic not near genes chr2R 20555383 intergenic not near genes chr2R 20555478 intergenic not near genes chr2R_18_20555001 chr2R_20555001 RAL-849 1914 chr2R 20572522 20572585 chr2R 20572662 20572725 25 138 6.5 6.0 6.2 3.5 203 chr2R 20572522 intron qsm - chr2R 20572624 intron qsm - chr2R 20572725 intron qsm - chr2R_25_20570001 chr2R_20570001 RAL-849 1915 chr2R 20577056 20577097 chr2R 20577189 20577230 17 133 0.0 8.5 4.2 3.3 174 chr2R 20577056 intron qsm - chr2R 20577143 intron qsm - chr2R 20577230 intron qsm - chr2R_17_20575001 chr2R_20575001 RAL-849 1916 chr2R 20584424 20584481 chr2R 20584557 20584614 10 133 8.5 5.0 6.8 1.3 190 chr2R 20584424 intergenic mir-313 -,mir-2498 -,mir-312 -,mir-311 - chr2R 20584519 intergenic mir-2498 -,mir-313 -,mir-312 - chr2R 20584614 intergenic mir-2498 -,mir-313 -,mir-312 - chr2R_10_20580001 chr2R_20580001 RAL-849 1917 chr2R 20601675 20601751 chr2R 20601809 20601884 16 135 9.5 11.5 10.5 1.4 209 chr2R 20601675 intron bl + chr2R 20601780 intron bl + chr2R 20601884 intron bl + chr2R_16_20600001 chr2R_20600001 RAL-849 1918 chr2R 20667321 20667340 chr2R 20667483 20667487 10 160 26.5 25.0 25.8 0.4 166 chr2R 20667321 intergenic Fem-1 -,exu - chr2R 20667404 intergenic exu -,Fem-1 - chr2R 20667487 3` UTR exu - chr2R_10_20665001 chr2R_20665001 RAL-849 1919 chr2R 20678150 20678230 chr2R 20678330 20678372 18 178 2.0 7.5 4.8 3.1 222 chr2R 20678150 intergenic not near genes chr2R 20678261 intergenic not near genes chr2R 20678372 intergenic not near genes chr2R_18_20675001 chr2R_20675001 RAL-849 1920 chr2R 20689592 20689619 chr2R 20690253 20690280 11 660 3.5 9.0 6.2 1.5 688 chr2R 20689592 intergenic not near genes chr2R 20689936 intergenic not near genes chr2R 20690280 intergenic not near genes chr2R_11_20685001 chr2R_20685001 RAL-849 1921 chr2R 20739412 20739472 chr2R 20744230 20744290 F-element 24 4815 10.0 10.0 10.0 2.2 4878 chr2R 20739412 intron dpr + chr2R 20741851 intron dpr + chr2R 20744290 intron dpr + chr2R_24_20740001 chr2R_20740001 RAL-849 1922 chr2R 20760782 20760796 chr2R 20761107 20761121 4 325 12.5 0.5 6.5 0.5 339 chr2R 20760782 intergenic not near genes chr2R 20760952 intergenic not near genes chr2R 20761121 intergenic not near genes chr2R_4_20760001 chr2R_20760001 RAL-849 1923 chr2R 20783269 20783321 chr2R 20788091 20788143 F-element 11 4822 4.5 7.5 6.0 1.6 4874 chr2R 20783269 intergenic not near genes chr2R 20785706 intergenic not near genes chr2R 20788143 intergenic CG43666 - chr2R_11_20785001 chr2R_20785001 RAL-849 1924 chr2R 20942351 20942373 chr2R 20942499 20942521 6 148 0.0 9.0 4.5 1.1 170 chr2R 20942351 intergenic not near genes chr2R 20942436 intergenic not near genes chr2R 20942521 intergenic not near genes chr2R_6_20940001 chr2R_20940001 RAL-849 1925 chr2R 20962867 20962935 chr2R 20963015 20963083 29 146 9.5 8.5 9.0 2.9 216 chr2R 20962867 intergenic not near genes chr2R 20962975 intergenic not near genes chr2R 20963083 intergenic not near genes chr2R_29_20960001 chr2R_20960001 RAL-849 1926 chr2R 20966979 20967055 chr2R 20967106 20967182 14 127 4.0 0.5 2.2 4.4 203 chr2R 20966979 intergenic not near genes chr2R 20967080 intergenic not near genes chr2R 20967182 intergenic not near genes chr2R_14_20965001 chr2R_20965001 RAL-849 1927 chr2R 21027605 21027676 chr2R 21027749 21027820 20 142 7.5 7.0 7.2 2.4 215 chr2R 21027605 intergenic not near genes chr2R 21027712 intergenic not near genes chr2R 21027820 intergenic not near genes chr2R_20_21025001 chr2R_21025001 RAL-849 1928 chr2R 21136847 21136918 chr2R 21136981 21137052 23 134 0.0 5.5 2.8 6.1 205 chr2R 21136847 intron Magi - chr2R 21136950 intron Magi - chr2R 21137052 intron Magi - chr2R_23_21135001 chr2R_21135001 RAL-849 1929 chr2R 21141075 21141145 chr2R 21141221 21141291 16 146 7.0 9.5 8.2 1.7 216 chr2R 21141075 intron Magi - chr2R 21141183 intron Magi - chr2R 21141291 intron Magi - chr2R_16_21140001 chr2R_21140001 RAL-849 1930 chr2R 21151074 21151128 chr2R 21153757 21153811 opus 23 2683 14.5 10.5 12.5 1.7 2737 chr2R 21151074 exon CG30389 - chr2R 21152442 intron CG30389 - chr2R 21153811 intron CG30389 - chr2R_23_21150001 chr2R_21150001 RAL-849 1931 chr2R 21193959 21194029 chr2R 21194094 21194164 21 135 9.5 7.0 8.2 2.3 205 chr2R 21193959 intron Lapsyn + chr2R 21194062 intron Lapsyn + chr2R 21194164 intron Lapsyn + chr2R_21_21190001 chr2R_21190001 RAL-849 1932 chr2R 21285382 21285436 chr2R 21285509 21285563 28 127 11.0 12.5 11.8 2.2 181 chr2R 21285382 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285472 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285563 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_28_21285001 chr2R_21285001 RAL-849 1933 chr2R 21363136 21363174 chr2R 21363284 21363313 8 145 0.0 11.5 5.8 1.2 177 chr2R 21363136 intron cv-2 - chr2R 21363224 intron cv-2 - chr2R 21363313 intron cv-2 - chr2R_8_21360001 chr2R_21360001 RAL-849 1934 chr2R 21370484 21370537 chr2R 21370641 21370694 18 155 9.0 5.0 7.0 2.2 210 chr2R 21370484 intron cv-2 - chr2R 21370589 intron cv-2 - chr2R 21370694 intron cv-2 - chr2R_18_21370001 chr2R_21370001 RAL-849 1935 chr2R 21381882 21381918 chr2R 21382019 21382055 5 137 7.5 0.0 3.8 1.0 173 chr2R 21381882 intergenic not near genes chr2R 21381968 intergenic not near genes chr2R 21382055 intergenic not near genes chr2R_5_21380001 chr2R_21380001 RAL-849 1936 chr2R 21408324 21408407 chr2R 21408466 21408549 21 141 5.0 0.5 2.8 5.5 225 chr2R 21408324 intron Sdc - chr2R 21408436 intron Sdc - chr2R 21408549 intron Sdc - chr2R_21_21405001 chr2R_21405001 RAL-849 1937 chr2R 21416737 21416815 chr2R 21416876 21416953 29 135 9.0 7.5 8.2 3.2 216 chr2R 21416737 intron Sdc - chr2R 21416845 intron Sdc - chr2R 21416953 intron Sdc - chr2R_29_21415001 chr2R_21415001 RAL-849 1938 chr2R 21454989 21455064 chr2R 21455121 21455184 31 121 7.0 9.0 8.0 3.4 195 chr2R 21454989 intron Sdc - chr2R 21455086 intron Sdc - chr2R 21455184 intron Sdc - chr2R_31_21455001 chr2R_21455001 RAL-849 1939 chr2R 21521714 21521756 chr2R 21521850 21521892 10 134 1.5 2.0 1.8 3.6 178 chr2R 21521714 exon CG30289 - chr2R 21521803 exon CG30289 - chr2R 21521892 intergenic CG30289 - chr2R_10_21520001 chr2R_21520001 RAL-849 1940 chr2R 21540658 21540697 chr2R 21540926 21540965 16 268 7.0 6.0 6.5 2.1 307 chr2R 21540658 intron Egfr + chr2R 21540812 intron Egfr + chr2R 21540965 intron Egfr + chr2R_16_21540001 chr2R_21540001 RAL-849 1941 chr2R 21546737 21546820 chr2R 21546868 21546888 23 108 4.5 6.0 5.2 3.7 151 chr2R 21546737 intron Egfr + chr2R 21546812 intron Egfr + chr2R 21546888 intron Egfr + chr2R_23_21545001 chr2R_21545001 RAL-849 1942 chr2R 21578721 21578757 chr2R 21578856 21578892 15 135 8.5 13.0 10.8 1.3 171 chr2R 21578721 intergenic not near genes chr2R 21578806 intergenic not near genes chr2R 21578892 intergenic not near genes chr2R_15_21575001 chr2R_21575001 RAL-849 1943 chr2R 21592816 21592847 chr2R 21592934 21592958 7 121 14.0 13.0 13.5 0.5 142 chr2R 21592816 intergenic not near genes chr2R 21592887 intergenic not near genes chr2R 21592958 intergenic not near genes chr2R_7_21590001 chr2R_21590001 RAL-849 1944 chr2R 21597711 21597773 chr2R 21597854 21597894 28 143 9.0 8.0 8.5 2.9 183 chr2R 21597711 intergenic not near genes chr2R 21597802 intergenic not near genes chr2R 21597894 intergenic not near genes chr2R_28_21595001 chr2R_21595001 RAL-849 1945 chr2R 21605872 21605951 chr2R 21606006 21606085 21 132 7.5 7.5 7.5 2.5 213 chr2R 21605872 3` UTR CG10433 - chr2R 21605978 3` UTR CG10433 - chr2R 21606085 exon CG10433 - chr2R_21_21605001 chr2R_21605001 RAL-849 1946 chr2R 21613321 21613324 chr2R 21613449 21613452 4 128 18.0 4.0 11.0 0.3 131 chr2R 21613321 intergenic CG15673 - chr2R 21613386 intergenic CG15673 -,CG18870 - chr2R 21613452 intergenic CG15673 -,CG18870 - chr2R_4_21610001 chr2R_21610001 RAL-849 1947 chr2R 21631618 21631637 chr2R 21631807 21631826 4 189 3.0 6.5 4.8 0.7 208 chr2R 21631618 3` UTR CR42547 - chr2R 21631722 3` UTR CR42547 - chr2R 21631826 3` UTR CR42547 - chr2R_4_21630001 chr2R_21630001 RAL-849 1948 chr2R 21659621 21659688 chr2R 21659908 21659942 16 274 38.0 26.5 32.2 0.5 321 chr2R 21659621 exon Rae1 - chr2R 21659782 exon Rae1 - chr2R 21659942 5` UTR Rae1 - chr2R_16_21655001 chr2R_21655001 RAL-849 1949 chr2R 21721527 21721603 chr2R 21721665 21721741 27 136 7.0 9.0 8.0 3.0 214 chr2R 21721527 intron LBR + chr2R 21721634 intron LBR + chr2R 21721741 intron LBR + chr2R_27_21720001 chr2R_21720001 RAL-849 1950 chr2R 21726689 21726714 chr2R 21726844 21726869 11 155 9.5 7.5 8.5 1.2 180 chr2R 21726689 intergenic not near genes chr2R 21726779 intergenic not near genes chr2R 21726869 intergenic not near genes chr2R_11_21725001 chr2R_21725001 RAL-849 1951 chr2R 21738236 21738311 chr2R 21747445 21747497 roo 13 9200 5.0 7.5 6.2 1.8 9261 chr2R 21738236 intergenic not near genes chr2R 21742866 intergenic not near genes chr2R 21747497 intergenic not near genes chr2R_13_21740001 chr2R_21740001 RAL-849 1952 chr2R 21753043 21753110 chr2R 21753578 21753645 roo 32 534 10.5 10.0 10.2 2.9 602 chr2R 21753043 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753645 intergenic not near genes chr2R_32_21750001 chr2R_21750001 RAL-849 1953 chr2R 21802379 21802451 chr2R 21802520 21802592 13 141 6.5 5.0 5.8 1.9 213 chr2R 21802379 intergenic not near genes chr2R 21802486 intergenic not near genes chr2R 21802592 intergenic not near genes chr2R_13_21800001 chr2R_21800001 RAL-849 1954 chr2R 21809487 21809542 chr2R 21817777 21817832 roo 21 8290 7.5 9.0 8.2 2.3 8345 chr2R 21809487 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817832 intergenic not near genes chr2R_21_21810001 chr2R_21810001 RAL-849 1955 chr2R 21830174 21830231 chr2R 21830303 21830360 23 129 5.5 6.5 6.0 3.3 186 chr2R 21830174 intron CG13492 - chr2R 21830267 intron CG13492 - chr2R 21830360 intron CG13492 - chr2R_23_21830001 chr2R_21830001 RAL-849 1956 chr2R 21831121 21831127 chr2R 21831250 21831256 4 129 0.0 9.5 4.8 0.7 135 chr2R 21831121 intron CG13492 - chr2R 21831188 intron CG13492 - chr2R 21831256 intron CG13492 - chr2R_4_21830001 chr2R_21830001 RAL-849 1957 chr2R 21841437 21841501 chr2R 21841569 21841636 23 134 3.5 11.0 7.2 2.8 199 chr2R 21841437 intergenic not near genes chr2R 21841536 intergenic not near genes chr2R 21841636 intergenic not near genes chr2R_23_21840001 chr2R_21840001 RAL-849 1958 chr2R 21870907 21870969 chr2R 21871036 21871099 16 129 1.0 4.0 2.5 4.6 192 chr2R 21870907 intergenic not near genes chr2R 21871003 intergenic not near genes chr2R 21871099 intergenic not near genes chr2R_16_21870001 chr2R_21870001 RAL-849 1959 chr2R 21886094 21886168 chr2R 21886223 21886318 20 140 5.0 0.0 2.5 5.7 224 chr2R 21886094 intron Fili + chr2R 21886206 intron Fili + chr2R 21886318 intron Fili + chr2R_20_21885001 chr2R_21885001 RAL-849 1960 chr2R 21888295 21888318 chr2R 21888442 21888465 10 147 8.5 13.0 10.8 0.8 170 chr2R 21888295 intron Fili + chr2R 21888380 intron Fili + chr2R 21888465 intron Fili + chr2R_10_21885001 chr2R_21885001 RAL-849 1961 chr2R 21914305 21914329 chr2R 21914442 21914466 7 137 1.5 4.0 2.8 1.8 161 chr2R 21914305 intron Fili + chr2R 21914386 intron Fili + chr2R 21914466 intron Fili + chr2R_7_21910001 chr2R_21910001 RAL-849 1962 chr2R 21919832 21919896 chr2R 21919968 21920034 18 134 5.5 8.0 6.8 2.3 202 chr2R 21919832 intron Fili + chr2R 21919933 intron Fili + chr2R 21920034 intron Fili + chr2R_18_21915001 chr2R_21915001 RAL-849 1963 chr2R 21932212 21932239 chr2R 21932336 21932360 12 124 14.0 9.0 11.5 1.0 148 chr2R 21932212 intron Fili + chr2R 21932286 intron Fili + chr2R 21932360 intron Fili + chr2R_12_21930001 chr2R_21930001 RAL-849 1964 chr2R 21932240 21932273 chr2R 21932328 21932401 18 119 10.5 10.0 10.2 1.6 161 chr2R 21932240 intron Fili + chr2R 21932320 intron Fili + chr2R 21932401 intron Fili + chr2R_18_21930001 chr2R_21930001 RAL-849 1965 chr2R 21946728 21946796 chr2R 21946874 21946942 20 146 9.5 8.5 9.0 2.0 214 chr2R 21946728 intergenic Fili + chr2R 21946835 intergenic not near genes chr2R 21946942 intergenic not near genes chr2R_20_21945001 chr2R_21945001 RAL-849 1966 chr2R 21963159 21963219 chr2R 21963294 21963356 14 136 6.0 6.0 6.0 2.0 197 chr2R 21963159 intergenic not near genes chr2R 21963258 intergenic not near genes chr2R 21963356 intergenic not near genes chr2R_14_21960001 chr2R_21960001 RAL-849 1967 chr2R 21966504 21966536 chr2R 21966642 21966674 10 138 4.5 0.0 2.2 3.1 170 chr2R 21966504 intron ppk9 + chr2R 21966589 intron ppk9 + chr2R 21966674 intron ppk9 + chr2R_10_21965001 chr2R_21965001 RAL-849 1968 chr2R 21985495 21985564 chr2R 21985625 21985701 23 131 1.0 6.0 3.5 5.1 206 chr2R 21985495 intergenic CG30401 - chr2R 21985598 intergenic CG30401 - chr2R 21985701 3` UTR CG30401 - chr2R_23_21985001 chr2R_21985001 RAL-849 1969 chr2R 21992367 21992427 chr2R 21992494 21992554 28 127 4.5 8.0 6.2 3.9 187 chr2R 21992367 intron CG34370 - chr2R 21992460 intron CG34370 - chr2R 21992554 intron CG34370 - chr2R_28_21990001 chr2R_21990001 RAL-849 1970 chr2R 22003048 22003115 chr2R 22003184 22003251 23 129 8.5 0.0 4.2 4.4 203 chr2R 22003048 intron CG34370 - chr2R 22003150 intron CG34370 - chr2R 22003251 intron CG34370 - chr2R_23_22000001 chr2R_22000001 RAL-849 1971 chr2R 22012934 22012974 chr2R 22013077 22013117 17 143 14.0 4.0 9.0 1.7 183 chr2R 22012934 intron CG34370 - chr2R 22013026 intron CG34370 - chr2R 22013117 intron CG34370 - chr2R_17_22010001 chr2R_22010001 RAL-849 1972 chr2R 22012978 22013002 chr2R 22013121 22013145 10 143 7.5 10.5 9.0 1.0 167 chr2R 22012978 intron CG34370 - chr2R 22013062 intron CG34370 - chr2R 22013145 intron CG34370 - chr2R_10_22010001 chr2R_22010001 RAL-849 1973 chr2R 22029487 22029530 chr2R 22029615 22029658 11 128 5.5 1.0 3.2 2.6 171 chr2R 22029487 intron CG34370 - chr2R 22029572 intron CG34370 - chr2R 22029658 intron CG34370 - chr2R_11_22025001 chr2R_22025001 RAL-849 1974 chr2R 22035494 22035562 chr2R 22035631 22035699 24 136 33.0 31.0 32.0 0.7 205 chr2R 22035494 intron,exon CG34370 -,CG9308 + chr2R 22035596 intron,3` UTR CG34370 -,CG9308 + chr2R 22035699 intron CG34370 - chr2R_24_22035001 chr2R_22035001 RAL-849 1975 chr2R 22095919 22095925 chr2R 22096052 22096058 5 133 21.5 4.5 13.0 0.4 139 chr2R 22095919 intron CG11073 - chr2R 22095988 intron CG11073 - chr2R 22096058 intron CG11073 - chr2R_5_22095001 chr2R_22095001 RAL-849 1976 chr2R 22095928 22095985 chr2R 22096048 22096118 17 132 7.0 5.0 6.0 2.4 190 chr2R 22095928 intron CG11073 - chr2R 22096023 intron CG11073 - chr2R 22096118 intron CG11073 - chr2R_17_22095001 chr2R_22095001 RAL-849 1977 chr2R 22096455 22096490 chr2R 22096582 22096617 18 126 8.0 11.0 9.5 1.7 162 chr2R 22096455 intron CG11073 - chr2R 22096536 intron CG11073 - chr2R 22096617 intron CG11073 - chr2R_18_22095001 chr2R_22095001 RAL-849 1978 chr2R 22107319 22107357 chr2R 22107455 22107486 7 135 1.0 5.0 3.0 1.8 167 chr2R 22107319 intron Vrp1 - chr2R 22107402 intron Vrp1 - chr2R 22107486 intron Vrp1 - chr2R_7_22105001 chr2R_22105001 RAL-849 1979 chr2R 22158533 22158560 chr2R 22158608 22158631 17 109 13.5 13.0 13.2 1.2 98 chr2R 22158533 intron a + chr2R 22158582 intron a + chr2R 22158631 intron a + chr2R_17_22155001 chr2R_22155001 RAL-849 1980 chr2R 22185625 22185703 chr2R 22185774 22185852 12 148 6.5 0.0 3.2 2.9 227 chr2R 22185625 exon MED16 + chr2R 22185738 3` UTR MED16 + chr2R 22185852 3` UTR MED16 + chr2R_12_22185001 chr2R_22185001 RAL-849 1981 chr2R 22189394 22189469 chr2R 22189572 22189646 20 177 5.0 5.5 5.2 3.2 252 chr2R 22189394 3` UTR Vps35 + chr2R 22189520 3` UTR Vps35 + chr2R 22189646 3` UTR Vps35 + chr2R_20_22185001 chr2R_22185001 RAL-849 1982 chr2R 22258458 22258527 chr2R 22258638 22258708 21 181 3.5 6.5 5.0 3.5 250 chr2R 22258458 intron dve + chr2R 22258583 intron dve + chr2R 22258708 intron dve + chr2R_21_22255001 chr2R_22255001 RAL-849 1983 chr2R 22349656 22349715 chr2R 22351490 22351539 jockey 17 1833 11.0 9.5 10.2 1.5 1883 chr2R 22349656 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351539 intron Liprin-gamma - chr2R_17_22350001 chr2R_22350001 RAL-849 1984 chr2R 22362612 22362672 chr2R 22362741 22362801 19 129 6.0 6.5 6.2 2.6 189 chr2R 22362612 intron Liprin-gamma - chr2R 22362706 intron Liprin-gamma - chr2R 22362801 intron Liprin-gamma - chr2R_19_22360001 chr2R_22360001 RAL-849 1985 chr2R 22370735 22370759 chr2R 22370867 22370891 8 132 4.0 0.0 2.0 2.7 156 chr2R 22370735 intron Liprin-gamma - chr2R 22370813 intron Liprin-gamma - chr2R 22370891 intron Liprin-gamma - chr2R_8_22370001 chr2R_22370001 RAL-849 1986 chr2R 22380312 22380392 chr2R 22380453 22380533 17 140 5.5 0.0 2.8 4.5 221 chr2R 22380312 intron wrapper + chr2R 22380422 intron wrapper + chr2R 22380533 intron wrapper + chr2R_17_22380001 chr2R_22380001 RAL-849 1987 chr2R 22459666 22459700 chr2R 22459805 22459839 13 137 15.5 10.0 12.8 0.9 173 chr2R 22459666 intron CG10384 + chr2R 22459752 intron CG10384 + chr2R 22459839 intron CG10384 + chr2R_13_22455001 chr2R_22455001 RAL-849 1988 chr2R 22465279 22465338 chr2R 22465528 22465587 BS 17 249 10.5 9.5 10.0 1.5 308 chr2R 22465279 intron CG10384 + chr2R 22465433 intron CG10384 + chr2R 22465587 intron CG10384 + chr2R_17_22465001 chr2R_22465001 RAL-849 1989 chr2R 22505446 22505461 chr2R 22505703 22505720 8 259 23.0 7.5 15.2 0.5 274 chr2R 22505446 intron px - chr2R 22505583 intron px - chr2R 22505720 intron px - chr2R_8_22505001 chr2R_22505001 RAL-849 1990 chr2R 22505466 22505508 chr2R 22505695 22505767 22 245 12.0 7.5 9.8 2.0 301 chr2R 22505466 intron px - chr2R 22505616 intron px - chr2R 22505767 intron px - chr2R_22_22505001 chr2R_22505001 RAL-849 1991 chr2R 22507426 22507444 chr2R 22507532 22507570 9 124 7.5 15.5 11.5 0.7 144 chr2R 22507426 intron px - chr2R 22507498 intron px - chr2R 22507570 intron px - chr2R_9_22505001 chr2R_22505001 RAL-849 1992 chr2R 22524927 22524985 chr2R 22525053 22525111 21 125 9.0 11.0 10.0 1.9 184 chr2R 22524927 intron px - chr2R 22525019 intron px - chr2R 22525111 intron px - chr2R_21_22525001 chr2R_22525001 RAL-849 1993 chr2R 22525726 22525780 chr2R 22529335 22529389 jockey 23 3607 7.0 13.0 10.0 2.1 3663 chr2R 22525726 intron px - chr2R 22527558 intron px - chr2R 22529389 intron px - chr2R_23_22525001 chr2R_22525001 RAL-849 1994 chr2R 22580414 22580440 chr2R 22586614 22586638 diver 10 6200 0.0 6.0 3.0 2.5 6224 chr2R 22580414 intron dnr1 - chr2R 22583526 intron dnr1 - chr2R 22586638 intron dnr1 - chr2R_10_22580001 chr2R_22580001 RAL-849 1995 chr2R 22588109 22588123 chr2R 22588254 22588264 7 144 15.5 16.0 15.8 0.4 155 chr2R 22588109 intron dnr1 - chr2R 22588186 intron dnr1 - chr2R 22588264 intron dnr1 - chr2R_7_22585001 chr2R_22585001 RAL-849 1996 chr2R 22588125 22588150 chr2R 22588253 22588295 13 138 13.0 15.5 14.2 0.9 170 chr2R 22588125 intron dnr1 - chr2R 22588210 intron dnr1 - chr2R 22588295 intron dnr1 - chr2R_13_22585001 chr2R_22585001 RAL-849 1997 chr2R 22616946 22617017 chr2R 22617079 22617150 23 131 6.0 9.0 7.5 2.7 204 chr2R 22616946 intron CG33143 + chr2R 22617048 intron CG33143 + chr2R 22617150 intron CG33143 + chr2R_23_22615001 chr2R_22615001 RAL-849 1998 chr2R 22666555 22666616 chr2R 22666685 22666746 21 130 7.5 2.0 4.8 3.6 191 chr2R 22666555 3` UTR,intron CR45269 -,CR42868 + chr2R 22666650 5` UTR CR42868 + chr2R 22666746 5` UTR CR42868 + chr2R_21_22665001 chr2R_22665001 RAL-849 1999 chr2R 22723196 22723259 chr2R 22723322 22723385 29 125 10.5 12.5 11.5 2.3 189 chr2R 22723196 intron jbug - chr2R 22723290 intron jbug - chr2R 22723385 intron jbug - chr2R_29_22720001 chr2R_22720001 RAL-849 2000 chr2R 22735203 22735247 chr2R 22735329 22735373 16 126 10.5 7.0 8.8 1.6 170 chr2R 22735203 intron jbug - chr2R 22735288 intron jbug - chr2R 22735373 intron jbug - chr2R_16_22735001 chr2R_22735001 RAL-849 2001 chr2R 22756578 22756642 chr2R 22756712 22756770 15 128 9.0 3.5 6.2 2.1 192 chr2R 22756578 intron,intron CG42260 -,CR30267 + chr2R 22756674 intron,intron CG42260 -,CR30267 + chr2R 22756770 intron,intron CG42260 -,CR30267 + chr2R_15_22755001 chr2R_22755001 RAL-849 2002 chr2R 22774926 22774990 chr2R 22775380 22775451 jockey 21 467 6.0 9.5 7.8 2.4 525 chr2R 22774926 intron CG42260 - chr2R 22775188 intron CG42260 - chr2R 22775451 intron CG42260 - chr2R_21_22775001 chr2R_22775001 RAL-849 2003 chr2R 22785697 22785753 chr2R 22785825 22785881 13 128 4.5 10.5 7.5 1.5 184 chr2R 22785697 intron CG42260 - chr2R 22785789 intron CG42260 - chr2R 22785881 intron CG42260 - chr2R_13_22785001 chr2R_22785001 RAL-849 2004 chr2R 22842994 22843024 chr2R 22845006 22845036 flea 10 2012 11.0 12.0 11.5 0.8 2042 chr2R 22842994 intergenic CG9826 + chr2R 22844015 intergenic not near genes chr2R 22845036 intergenic not near genes chr2R_10_22840001 chr2R_22840001 RAL-849 2005 chr2R 22843027 22843032 chr2R 22844992 22845044 flea 4 2000 10.5 10.5 10.5 0.3 2017 chr2R 22843027 intergenic CG9826 + chr2R 22844036 intergenic not near genes chr2R 22845044 intergenic not near genes chr2R_4_22840001 chr2R_22840001 RAL-849 2006 chr2R 22868215 22868283 chr2R 22868375 22868446 29 161 8.5 6.0 7.2 3.5 231 chr2R 22868215 5` UTR fd59A + chr2R 22868330 5` UTR fd59A + chr2R 22868446 5` UTR fd59A + chr2R_29_22865001 chr2R_22865001 RAL-849 2007 chr2R 22941775 22941841 chr2R 22941904 22941970 27 128 8.0 7.0 7.5 3.2 195 chr2R 22941775 intergenic CG42694 + chr2R 22941872 intergenic CG42694 + chr2R 22941970 5` UTR CG42694 + chr2R_27_22940001 chr2R_22940001 RAL-849 2008 chr2R 22956495 22956568 chr2R 22957838 22957919 37 1346 5.5 9.0 7.2 4.5 1424 chr2R 22956495 intergenic not near genes chr2R 22957207 3` UTR CR44780 - chr2R 22957919 intergenic not near genes chr2R_37_22955001 chr2R_22955001 RAL-849 2009 chr2R 23052612 23052671 chr2R 23052738 23052797 30 124 11.0 6.0 8.5 3.2 185 chr2R 23052612 intergenic not near genes chr2R 23052704 intergenic not near genes chr2R 23052797 intergenic not near genes chr2R_30_23050001 chr2R_23050001 RAL-849 2010 chr2R 23053958 23054021 chr2R 23054086 23054119 13 125 6.0 0.5 3.2 3.1 161 chr2R 23053958 intergenic not near genes chr2R 23054038 intergenic not near genes chr2R 23054119 intergenic not near genes chr2R_13_23050001 chr2R_23050001 RAL-849 2011 chr2R 23061722 23061789 chr2R 23061866 23061933 26 141 1.0 9.5 5.2 4.2 211 chr2R 23061722 3` UTR l(2)06496 - chr2R 23061828 3` UTR l(2)06496 - chr2R 23061933 exon l(2)06496 - chr2R_26_23060001 chr2R_23060001 RAL-849 2012 chr2R 23108926 23108955 chr2R 23109058 23109087 5 131 4.5 15.0 9.8 0.5 161 chr2R 23108926 intergenic not near genes chr2R 23109006 intergenic not near genes chr2R 23109087 intergenic not near genes chr2R_5_23105001 chr2R_23105001 RAL-849 2013 chr2R 23131294 23131370 chr2R 23131446 23131521 25 151 5.5 5.0 5.2 4.0 227 chr2R 23131294 intergenic not near genes chr2R 23131408 intergenic not near genes chr2R 23131521 intergenic not near genes chr2R_25_23130001 chr2R_23130001 RAL-849 2014 chr2R 23134814 23134846 chr2R 23134923 23134930 15 121 1.0 9.5 5.2 2.4 116 chr2R 23134814 intergenic not near genes chr2R 23134872 intergenic not near genes chr2R 23134930 intergenic not near genes chr2R_15_23130001 chr2R_23130001 RAL-849 2015 chr2R 23184292 23184295 chr2R 23184427 23184430 4 135 1.0 15.0 8.0 0.4 138 chr2R 23184292 intron,intron CG34371 -,CG13539 + chr2R 23184361 intron,intron CG34371 -,CG13539 + chr2R 23184430 intron,5` UTR CG34371 -,CG13539 + chr2R_4_23180001 chr2R_23180001 RAL-849 2016 chr2R 23186039 23186120 chr2R 23186234 23186315 13 195 6.5 6.5 6.5 1.7 276 chr2R 23186039 intron CG34371 - chr2R 23186177 intron CG34371 - chr2R 23186315 intron CG34371 - chr2R_13_23185001 chr2R_23185001 RAL-849 2017 chr2R 23188510 23188580 chr2R 23188638 23188708 12 128 9.0 9.0 9.0 1.2 198 chr2R 23188510 intron CG34371 - chr2R 23188609 intron CG34371 - chr2R 23188708 intron CG34371 - chr2R_12_23185001 chr2R_23185001 RAL-849 2018 chr2R 23193194 23193262 chr2R 23193334 23193401 14 136 2.5 3.0 2.8 3.7 207 chr2R 23193194 intron CG34371 - chr2R 23193298 intron CG34371 - chr2R 23193401 intron CG34371 - chr2R_14_23190001 chr2R_23190001 RAL-849 2019 chr2R 23236766 23236853 chr2R 23236914 23236997 10 142 3.5 1.5 2.5 2.9 231 chr2R 23236766 intergenic not near genes chr2R 23236882 intergenic not near genes chr2R 23236997 intergenic not near genes chr2R_10_23235001 chr2R_23235001 RAL-849 2020 chr2R 23291287 23291322 chr2R 23291415 23291450 17 128 8.5 0.0 4.2 3.3 163 chr2R 23291287 3` UTR CR44783 - chr2R 23291368 3` UTR CR44783 - chr2R 23291450 intergenic CR44783 - chr2R_17_23290001 chr2R_23290001 RAL-849 2021 chr2R 23306802 23306824 chr2R 23306924 23306932 5 116 8.5 11.5 10.0 0.5 130 chr2R 23306802 intergenic not near genes chr2R 23306867 intergenic not near genes chr2R 23306932 intergenic not near genes chr2R_5_23305001 chr2R_23305001 RAL-849 2022 chr2R 23315338 23315394 chr2R 23315561 23315616 15 216 6.5 5.5 6.0 2.1 278 chr2R 23315338 intergenic not near genes chr2R 23315477 intergenic not near genes chr2R 23315616 intergenic not near genes chr2R_15_23315001 chr2R_23315001 RAL-849 2023 chr2R 23356234 23356299 chr2R 23356373 23356438 29 137 9.5 4.5 7.0 3.6 204 chr2R 23356234 3` UTR Rpi + chr2R 23356336 3` UTR Rpi + chr2R 23356438 3` UTR,3` UTR Rpi +,CG3500 - chr2R_29_23355001 chr2R_23355001 RAL-849 2024 chr2R 23402592 23402610 chr2R 23407689 23407707 flea 8 5095 0.0 10.0 5.0 1.3 5115 chr2R 23402592 intergenic CG3520 - chr2R 23405150 intergenic not near genes chr2R 23407707 intergenic not near genes chr2R_8_23405001 chr2R_23405001 RAL-849 2025 chr2R 23423693 23423767 chr2R 23423901 23423975 30 207 6.5 7.5 7.0 3.8 282 chr2R 23423693 intron CG9815 - chr2R 23423834 intron CG9815 - chr2R 23423975 intron CG9815 - chr2R_30_23420001 chr2R_23420001 RAL-849 2026 chr2R 23437184 23437223 chr2R 23437307 23437350 15 122 14.5 7.5 11.0 1.2 166 chr2R 23437184 intergenic not near genes chr2R 23437267 intergenic not near genes chr2R 23437350 intergenic not near genes chr2R_15_23435001 chr2R_23435001 RAL-849 2027 chr2R 23461130 23461140 chr2R 23461232 23461266 7 121 17.0 14.5 15.8 0.4 136 chr2R 23461130 intron CG43795 + chr2R 23461198 intron CG43795 + chr2R 23461266 intron CG43795 + chr2R_7_23460001 chr2R_23460001 RAL-849 2028 chr2R 23464082 23464098 chr2R 23464213 23464229 7 131 20.5 11.5 16.0 0.4 147 chr2R 23464082 intron CG43795 + chr2R 23464156 intron CG43795 + chr2R 23464229 intron CG43795 + chr2R_7_23460001 chr2R_23460001 RAL-849 2029 chr2R 23464102 23464125 chr2R 23464212 23464256 10 127 15.0 11.5 13.2 0.7 154 chr2R 23464102 intron CG43795 + chr2R 23464179 intron CG43795 + chr2R 23464256 intron CG43795 + chr2R_10_23460001 chr2R_23460001 RAL-849 2030 chr2R 23490839 23490865 chr2R 23490972 23491009 11 139 10.0 10.5 10.2 1.0 170 chr2R 23490839 exon CG43795 + chr2R 23490924 3` UTR CG43795 + chr2R 23491009 3` UTR CG43795 + chr2R_11_23490001 chr2R_23490001 RAL-849 2031 chr2R 23490867 23490897 chr2R 23490960 23491041 13 138 7.5 7.0 7.2 1.6 174 chr2R 23490867 exon CG43795 + chr2R 23490954 3` UTR CG43795 + chr2R 23491041 3` UTR CG43795 + chr2R_13_23490001 chr2R_23490001 RAL-849 2032 chr2R 23529529 23529575 chr2R 23537155 23537159 412 14 7619 11.0 9.0 10.0 1.3 7630 chr2R 23529529 exon bw - chr2R 23533344 intron bw - chr2R 23537159 exon bw - chr2R_14_23530001 chr2R_23530001 RAL-849 2033 chr2R 23529578 23529603 chr2R 23537153 23537197 412 11 7604 5.5 8.5 7.0 1.4 7619 chr2R 23529578 intron bw - chr2R 23533388 intron bw - chr2R 23537197 exon bw - chr2R_11_23530001 chr2R_23530001 RAL-849 2034 chr2R 23553682 23553724 chr2R 23553822 23553864 16 140 8.0 7.5 7.8 1.8 182 chr2R 23553682 intron pita - chr2R 23553773 intron pita - chr2R 23553864 intron pita - chr2R_16_23550001 chr2R_23550001 RAL-849 2035 chr2R 23554873 23554948 chr2R 23555007 23555079 23 134 5.0 7.0 6.0 3.3 206 chr2R 23554873 intergenic Rrp4 -,pita - chr2R 23554976 intergenic Rrp4 -,pita - chr2R 23555079 3` UTR Rrp4 - chr2R_23_23550001 chr2R_23550001 RAL-849 2036 chr2R 23586239 23586260 chr2R 23586372 23586393 6 133 9.5 28.0 18.8 0.3 154 chr2R 23586239 intron apt + chr2R 23586316 intron apt + chr2R 23586393 intron apt + chr2R_6_23585001 chr2R_23585001 RAL-849 2037 chr2R 23606989 23607192 chr2R 23607120 23607335 61 136 0.0 0.0 0.0 61.0 346 chr2R 23606989 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607335 intron CG17664 - chr2R_61_23605001 chr2R_23605001 RAL-849 2038 chr2R 23636761 23636864 chr2R 23636894 23636996 9 132 0.0 0.0 0.0 9.0 235 chr2R 23636761 intron retn + chr2R 23636878 intron retn + chr2R 23636996 intron retn + chr2R_9_23635001 chr2R_23635001 RAL-849 2039 chr2R 23771231 23771303 chr2R 23771358 23771435 7 129 0.0 0.0 0.0 7.0 204 chr2R 23771231 intron CG9850 - chr2R 23771333 intron CG9850 - chr2R 23771435 intron CG9850 - chr2R_7_23770001 chr2R_23770001 RAL-849 2040 chr2R 23784433 23784502 chr2R 23784556 23784622 26 126 8.0 8.0 8.0 2.9 189 chr2R 23784433 intron CG9850 - chr2R 23784528 intron CG9850 - chr2R 23784622 intron CG9850 - chr2R_26_23780001 chr2R_23780001 RAL-849 2041 chr2R 23887538 23887607 chr2R 23887665 23887734 18 122 9.5 7.0 8.2 2.0 196 chr2R 23887538 intron CG5597 + chr2R 23887636 intron CG5597 + chr2R 23887734 intron CG5597 + chr2R_18_23885001 chr2R_23885001 RAL-849 2042 chr2R 23914252 23914329 chr2R 23921926 23921958 412 37 7668 10.0 12.5 11.2 3.0 7706 chr2R 23914252 exon kcc + chr2R 23918105 intron kcc + chr2R 23921958 intron kcc + chr2R_37_23915001 chr2R_23915001 RAL-849 2043 chr2R 23986482 23986536 chr2R 23986612 23986666 24 130 8.5 11.5 10.0 2.2 184 chr2R 23986482 intron Phm - chr2R 23986574 intron Phm - chr2R 23986666 intron,5` UTR Phm -,CG30178 + chr2R_24_23985001 chr2R_23985001 RAL-849 2044 chr2R 24031336 24031344 chr2R 24031470 24031478 6 134 23.0 7.0 15.0 0.4 142 chr2R 24031336 5` UTR CG30172 - chr2R 24031407 5` UTR CG30172 - chr2R 24031478 intergenic CG30172 -,Chi - chr2R_6_24030001 chr2R_24030001 RAL-849 2045 chr2R 24031345 24031404 chr2R 24031469 24031511 33 131 12.0 7.0 9.5 3.1 166 chr2R 24031345 5` UTR CG30172 - chr2R 24031428 intergenic CG30172 -,Chi - chr2R 24031511 intergenic Chi -,CG30172 - chr2R_33_24030001 chr2R_24030001 RAL-849 2046 chr2R 24081540 24081609 chr2R 24083102 24083171 23 1557 41.0 37.0 39.0 0.6 1631 chr2R 24081540 intergenic CG13564 +,CG16786 + chr2R 24082356 intron CG16786 + chr2R 24083171 intron CG16786 + chr2R_23_24080001 chr2R_24080001 RAL-849 2047 chr2R 24081423 24081468 chr2R 24083671 24083730 24 2245 41.0 42.5 41.8 0.6 2307 chr2R 24081423 3` UTR CG13564 + chr2R 24082576 intron CG16786 + chr2R 24083730 exon CG16786 + chr2R_24_24080001 chr2R_24080001 RAL-849 2048 chr2R 24147025 24147097 chr2R 24154644 24154644 412 23 7616 6.5 9.5 8.0 2.6 7619 chr2R 24147025 intron Dat + chr2R 24150834 intron Dat + chr2R 24154644 intron Dat + chr2R_23_24150001 chr2R_24150001 RAL-849 2049 chr2R 24177197 24177263 chr2R 24184732 24184798 412 25 7534 7.5 8.0 7.8 2.8 7601 chr2R 24177197 3` UTR Nop60B + chr2R 24180998 intron Nop60B + chr2R 24184798 intron Nop60B + chr2R_25_24180001 chr2R_24180001 RAL-849 2050 chr2R 24228349 24228430 chr2R 24228475 24228506 29 108 7.0 10.0 8.5 3.1 157 chr2R 24228349 intron CG30419 - chr2R 24228428 intron CG30419 - chr2R 24228506 intron CG30419 - chr2R_29_24225001 chr2R_24225001 RAL-849 2051 chr2R 24243706 24243773 chr2R 24243850 24243911 14 144 2.0 8.5 5.2 2.3 205 chr2R 24243706 intron nord + chr2R 24243808 intron nord + chr2R 24243911 intron nord + chr2R_14_24240001 chr2R_24240001 RAL-849 2052 chr2R 24313337 24313399 chr2R 24313470 24313532 16 133 6.0 4.5 5.2 2.6 195 chr2R 24313337 intergenic betaTub60D + chr2R 24313434 intergenic betaTub60D + chr2R 24313532 intergenic betaTub60D + chr2R_16_24310001 chr2R_24310001 RAL-849 2053 chr2R 24353383 24353415 chr2R 24361795 24361827 roo 10 8412 17.0 9.0 13.0 0.7 8444 chr2R 24353383 intron,intron bs +,CR44811 - chr2R 24357605 intron,intron bs +,CR44811 - chr2R 24361827 intron,intron bs +,CR44811 - chr2R_10_24355001 chr2R_24355001 RAL-849 2054 chr2R 24430764 24430830 chr2R 24430895 24430961 16 128 8.5 8.0 8.2 1.7 197 chr2R 24430764 intergenic CG15873 - chr2R 24430862 intergenic CG15873 -,Pgam5-2 - chr2R 24430961 intergenic CG15873 -,Pgam5-2 - chr2R_16_24430001 chr2R_24430001 RAL-849 2055 chr2R 24513769 24513837 chr2R 24513898 24513966 25 129 7.5 11.0 9.2 2.5 197 chr2R 24513769 intron Letm1 - chr2R 24513868 intron Letm1 - chr2R 24513966 intron Letm1 - chr2R_25_24510001 chr2R_24510001 RAL-849 2056 chr2R 24584304 24584371 chr2R 24584436 24584456 34 128 6.0 10.5 8.2 3.7 152 chr2R 24584304 intron pio + chr2R 24584380 intron pio + chr2R 24584456 intron pio + chr2R_34_24580001 chr2R_24580001 RAL-849 2057 chr2R 24647547 24647614 chr2R 24655154 24655220 412 22 7606 5.5 7.5 6.5 2.9 7673 chr2R 24647547 intergenic not near genes chr2R 24651384 intergenic not near genes chr2R 24655220 intergenic not near genes chr2R_22_24650001 chr2R_24650001 RAL-849 2058 chr2R 24727848 24727915 chr2R 24735396 24735442 mdg1 23 7551 7.5 14.5 11.0 1.9 7594 chr2R 24727848 intron Mid1 - chr2R 24731645 intron Mid1 - chr2R 24735442 intron Mid1 - chr2R_23_24730001 chr2R_24730001 RAL-849 2059 chr2R 24763568 24763581 chr2R 24765594 24765607 G2 5 2024 18.5 11.5 15.0 0.3 2039 chr2R 24763568 exon CG3894 + chr2R 24764588 intron CG3894 + chr2R 24765607 exon CG3894 + chr2R_5_24760001 chr2R_24760001 RAL-849 2060 chr2R 24763582 24763640 chr2R 24765588 24765646 G2 22 2018 7.5 9.5 8.5 2.3 2064 chr2R 24763582 exon CG3894 + chr2R 24764614 intron CG3894 + chr2R 24765646 exon CG3894 + chr2R_22_24760001 chr2R_24760001 RAL-849 2061 chr2R 24859789 24859864 chr2R 24859926 24860000 19 134 7.0 0.0 3.5 4.2 211 chr2R 24859789 5` UTR CR44829 + chr2R 24859894 5` UTR CR44829 + chr2R 24860000 5` UTR CR44829 + chr2R_19_24855001 chr2R_24855001 RAL-849 2062 chr2R 24884003 24884075 chr2R 24884135 24884207 34 132 9.0 4.5 6.8 4.4 204 chr2R 24884003 intron NKAIN + chr2R 24884105 intron NKAIN + chr2R 24884207 intron NKAIN + chr2R_34_24880001 chr2R_24880001 RAL-849 2063 chr2R 25022599 25022669 chr2R 25022733 25022803 34 133 7.0 12.5 9.8 3.1 204 chr2R 25022599 intron uzip + chr2R 25022701 intron uzip + chr2R 25022803 intron uzip + chr2R_34_25020001 chr2R_25020001 RAL-849 2064 chr2R 25061294 25061367 chr2R 25061427 25061455 20 125 10.0 9.5 9.8 1.9 161 chr2R 25061294 intergenic not near genes chr2R 25061374 intergenic not near genes chr2R 25061455 intergenic not near genes chr2R_20_25060001 chr2R_25060001 RAL-849 2065 chr2R 25076516 25076526 chr2R 25076654 25076656 4 133 14.0 25.0 19.5 0.2 140 chr2R 25076516 intron gol - chr2R 25076586 intron gol - chr2R 25076656 intron gol - chr2R_4_25075001 chr2R_25075001 RAL-849 2066 chr2R 25081565 25081574 chr2R 25082711 25082720 6 1146 26.0 8.0 17.0 0.3 1155 chr2R 25081565 intron gol - chr2R 25082142 intron gol - chr2R 25082720 intron gol - chr2R_6_25080001 chr2R_25080001 RAL-849 2067 chr2R 25081576 25081633 chr2R 25082705 25082779 36 1139 10.0 7.0 8.5 3.8 1203 chr2R 25081576 intron gol - chr2R 25082178 intron gol - chr2R 25082779 intron gol - chr2R_36_25080001 chr2R_25080001 RAL-849 2068 chr2R 25101227 25101300 chr2R 25101379 25101452 20 152 5.5 10.0 7.8 2.3 225 chr2R 25101227 intron lov - chr2R 25101340 intron lov - chr2R 25101452 intron lov - chr2R_20_25100001 chr2R_25100001 RAL-849 2069 chr2R 25141612 25141628 chr2R 25159352 25159368 roo 5 17740 13.5 11.0 12.2 0.4 17756 chr2R 25141612 intergenic not near genes chr2R 25150490 intergenic not near genes chr2R 25159368 intergenic not near genes chr2R_5_25150001 chr2R_25150001 RAL-849 2070 chr2R 25141635 25141675 chr2R 25159370 25159415 roo 17 17740 7.5 12.5 10.0 1.5 17780 chr2R 25141635 intergenic not near genes chr2R 25150525 intergenic not near genes chr2R 25159415 intergenic not near genes chr2R_17_25150001 chr2R_25150001 RAL-849 2071 chr2R 25234714 25234789 chr2R 25234844 25234919 29 130 2.5 5.0 3.8 6.0 205 chr2R 25234714 intron CG9380 - chr2R 25234816 intron CG9380 - chr2R 25234919 intron CG9380 - chr2R_29_25230001 chr2R_25230001 RAL-849 2072 chr3L 48715 48783 chr3L 48850 48905 30 133 6.0 9.0 7.5 3.5 190 chr3L 48715 intergenic not near genes chr3L 48810 intergenic not near genes chr3L 48905 intergenic not near genes chr3L_30_45001 chr3L_45001 RAL-849 2073 chr3L 68943 69009 chr3L 69074 69146 32 135 6.0 6.5 6.2 4.4 203 chr3L 68943 3` UTR Lsp1gamma + chr3L 69044 intergenic Lsp1gamma +,CR44510 + chr3L 69146 5` UTR CR44510 + chr3L_32_65001 chr3L_65001 RAL-849 2074 chr3L 71888 71955 chr3L 72021 72088 34 132 7.0 9.0 8.0 3.8 200 chr3L 71888 intergenic CR43988 -,CG43150 + chr3L 71988 intergenic CR43988 - chr3L 72088 intergenic CR43988 - chr3L_34_70001 chr3L_70001 RAL-849 2075 chr3L 104617 104666 chr3L 104765 104829 20 159 10.5 6.0 8.2 2.2 212 chr3L 104617 intergenic not near genes chr3L 104723 intergenic not near genes chr3L 104829 intergenic not near genes chr3L_20_100001 chr3L_100001 RAL-849 2076 chr3L 107837 107905 chr3L 108178 108246 38 340 7.5 9.0 8.2 4.1 409 chr3L 107837 intergenic not near genes chr3L 108042 intergenic not near genes chr3L 108246 intergenic not near genes chr3L_38_105001 chr3L_105001 RAL-849 2077 chr3L 110176 110232 chr3L 119393 119449 roo 20 9214 7.0 6.0 6.5 2.7 9273 chr3L 110176 intergenic not near genes chr3L 114812 intergenic not near genes chr3L 119449 intergenic not near genes chr3L_20_110001 chr3L_110001 RAL-849 2078 chr3L 122067 122129 chr3L 122197 122259 20 129 12.0 6.0 9.0 2.0 192 chr3L 122067 intergenic not near genes chr3L 122163 intergenic not near genes chr3L 122259 intergenic not near genes chr3L_20_120001 chr3L_120001 RAL-849 2079 chr3L 164800 164829 chr3L 164968 164992 6 157 57.5 43.0 50.2 0.1 192 chr3L 164800 intron p130CAS + chr3L 164896 intron p130CAS + chr3L 164992 intron p130CAS + chr3L_6_160001 chr3L_160001 RAL-849 2080 chr3L 375198 375279 chr3L 375334 375387 11 133 0.5 5.0 2.8 2.9 189 chr3L 375198 intron trh - chr3L 375292 intron trh - chr3L 375387 intron trh - chr3L_11_375001 chr3L_375001 RAL-849 2081 chr3L 402662 402714 chr3L 409747 409772 297 33 7098 6.5 12.5 9.5 3.1 7110 chr3L 402662 intergenic not near genes chr3L 406217 intergenic not near genes chr3L 409772 intergenic not near genes chr3L_33_405001 chr3L_405001 RAL-849 2082 chr3L 428139 428215 chr3L 428310 428352 8 158 9.0 0.0 4.5 1.5 213 chr3L 428139 intergenic not near genes chr3L 428246 intergenic not near genes chr3L 428352 intergenic not near genes chr3L_8_425001 chr3L_425001 RAL-849 2083 chr3L 498464 498513 chr3L 498592 498641 16 128 4.0 5.5 4.8 2.8 177 chr3L 498464 intron klar - chr3L 498552 intron klar - chr3L 498641 intron klar - chr3L_16_495001 chr3L_495001 RAL-849 2084 chr3L 506280 506291 chr3L 506423 506434 5 143 10.0 0.0 5.0 0.8 154 chr3L 506280 exon klar - chr3L 506357 intron klar - chr3L 506434 intron klar - chr3L_5_505001 chr3L_505001 RAL-849 2085 chr3L 563099 563123 chr3L 563237 563260 10 138 6.0 11.0 8.5 1.1 161 chr3L 563099 intron hipk + chr3L 563180 intron hipk + chr3L 563260 intron hipk + chr3L_10_560001 chr3L_560001 RAL-849 2086 chr3L 563926 563996 chr3L 564155 564225 32 228 8.0 13.0 10.5 2.8 299 chr3L 563926 intron hipk + chr3L 564076 intron hipk + chr3L 564225 intron hipk + chr3L_32_560001 chr3L_560001 RAL-849 2087 chr3L 606845 606916 chr3L 606971 607045 17 128 5.0 1.0 3.0 4.2 200 chr3L 606845 intergenic Reg-2 - chr3L 606945 intergenic Reg-2 - chr3L 607045 intergenic Reg-2 - chr3L_17_605001 chr3L_605001 RAL-849 2088 chr3L 618388 618440 chr3L 618563 618615 17 174 11.0 6.5 8.8 1.7 227 chr3L 618388 intergenic not near genes chr3L 618502 intergenic not near genes chr3L 618615 intergenic not near genes chr3L_17_615001 chr3L_615001 RAL-849 2089 chr3L 642432 642462 chr3L 642573 642603 12 141 14.0 9.0 11.5 1.0 171 chr3L 642432 5` UTR CR43334 + chr3L 642518 5` UTR CR43334 + chr3L 642603 5` UTR CR43334 + chr3L_12_640001 chr3L_640001 RAL-849 2090 chr3L 642464 642492 chr3L 642564 642633 12 138 7.0 8.5 7.8 1.4 169 chr3L 642464 5` UTR CR43334 + chr3L 642548 5` UTR CR43334 + chr3L 642633 5` UTR CR43334 + chr3L_12_640001 chr3L_640001 RAL-849 2091 chr3L 746450 746526 chr3L 746585 746656 30 133 9.0 9.5 9.2 2.9 206 chr3L 746450 intron hng3 - chr3L 746553 intron hng3 - chr3L 746656 intron hng3 - chr3L_30_745001 chr3L_745001 RAL-849 2092 chr3L 789875 789941 chr3L 790410 790476 roo 26 534 9.0 8.5 8.8 2.7 601 chr3L 789875 intergenic not near genes chr3L 790176 intergenic not near genes chr3L 790476 intergenic not near genes chr3L_26_790001 chr3L_790001 RAL-849 2093 chr3L 823992 824041 chr3L 824124 824168 10 130 6.5 0.0 3.2 2.4 176 chr3L 823992 intergenic not near genes chr3L 824080 intergenic not near genes chr3L 824168 intergenic not near genes chr3L_10_820001 chr3L_820001 RAL-849 2094 chr3L 852521 852565 chr3L 852673 852717 10 152 8.0 8.0 8.0 1.1 196 chr3L 852521 3` UTR CG13890 + chr3L 852619 3` UTR CG13890 + chr3L 852717 intergenic dpr20 -,CG13890 + chr3L_10_850001 chr3L_850001 RAL-849 2095 chr3L 857954 857971 chr3L 866485 866501 Tirant 10 8530 26.5 10.5 18.5 0.5 8547 chr3L 857954 intergenic not near genes chr3L 862228 intergenic not near genes chr3L 866501 5` UTR CG12502 + chr3L_10_860001 chr3L_860001 RAL-849 2096 chr3L 857977 858028 chr3L 866482 866554 Tirant 18 8516 10.0 9.0 9.5 1.7 8577 chr3L 857977 intergenic not near genes chr3L 862266 intergenic not near genes chr3L 866554 5` UTR CG12502 + chr3L_18_860001 chr3L_860001 RAL-849 2097 chr3L 866826 866893 chr3L 867093 867160 15 267 11.5 0.0 5.8 2.2 334 chr3L 866826 5` UTR CG12502 + chr3L 866993 intron CG12502 + chr3L 867160 intron CG12502 + chr3L_15_865001 chr3L_865001 RAL-849 2098 chr3L 875613 875687 chr3L 875750 875824 34 136 8.0 10.0 9.0 3.4 211 chr3L 875613 intron CG32479 + chr3L 875718 intron CG32479 + chr3L 875824 intron CG32479 + chr3L_34_875001 chr3L_875001 RAL-849 2099 chr3L 925137 925196 chr3L 932613 932672 mdg1 27 7476 5.0 3.5 4.2 5.2 7535 chr3L 925137 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932672 intron Glut1 + chr3L_27_925001 chr3L_925001 RAL-849 2100 chr3L 933823 933890 chr3L 933999 934066 45 175 8.5 10.5 9.5 4.3 243 chr3L 933823 intron Glut1 + chr3L 933944 intron Glut1 + chr3L 934066 intron Glut1 + chr3L_45_930001 chr3L_930001 RAL-849 2101 chr3L 939733 939788 chr3L 940903 940959 jockey 22 1170 6.0 11.0 8.5 2.3 1226 chr3L 939733 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940959 intron Glut1 + chr3L_22_940001 chr3L_940001 RAL-849 2102 chr3L 958268 958340 chr3L 958402 958474 32 133 7.0 5.5 6.2 4.4 206 chr3L 958268 intron Glut1 + chr3L 958371 intron Glut1 + chr3L 958474 intron Glut1 + chr3L_32_955001 chr3L_955001 RAL-849 2103 chr3L 960967 961040 chr3L 961110 961183 23 143 2.0 5.0 3.5 5.1 216 chr3L 960967 intron Glut1 + chr3L 961075 intron Glut1 + chr3L 961183 intron Glut1 + chr3L_23_960001 chr3L_960001 RAL-849 2104 chr3L 1000223 1000299 chr3L 1000356 1000361 26 130 13.5 7.0 10.2 2.3 138 chr3L 1000223 intron trio - chr3L 1000292 intron trio - chr3L 1000361 intron trio - chr3L_26_1000001 chr3L_1000001 RAL-849 2105 chr3L 1007790 1007807 chr3L 1007916 1007935 5 132 16.5 0.0 8.2 0.5 145 chr3L 1007790 intron trio - chr3L 1007862 intron trio - chr3L 1007935 intron trio - chr3L_5_1005001 chr3L_1005001 RAL-849 2106 chr3L 1010949 1010962 chr3L 1011080 1011093 9 129 14.0 5.0 9.5 0.9 144 chr3L 1010949 intron trio - chr3L 1011021 intron trio - chr3L 1011093 intron trio - chr3L_9_1010001 chr3L_1010001 RAL-849 2107 chr3L 1010963 1011010 chr3L 1011078 1011141 14 124 7.0 5.0 6.0 2.0 178 chr3L 1010963 intron trio - chr3L 1011052 intron trio - chr3L 1011141 intron trio - chr3L_14_1010001 chr3L_1010001 RAL-849 2108 chr3L 1014976 1015048 chr3L 1015138 1015210 25 158 8.0 11.5 9.8 2.3 234 chr3L 1014976 intron trio - chr3L 1015093 intron trio - chr3L 1015210 intron trio - chr3L_25_1015001 chr3L_1015001 RAL-849 2109 chr3L 1033316 1033345 chr3L 1033462 1033497 7 147 0.0 0.0 0.0 7.0 181 chr3L 1033316 intron trio - chr3L 1033406 intron trio - chr3L 1033497 intron trio - chr3L_7_1030001 chr3L_1030001 RAL-849 2110 chr3L 1040504 1040580 chr3L 1040638 1040714 20 134 5.5 6.5 6.0 2.9 210 chr3L 1040504 intron bab1 - chr3L 1040609 intron bab1 - chr3L 1040714 intron bab1 - chr3L_20_1040001 chr3L_1040001 RAL-849 2111 chr3L 1047308 1047377 chr3L 1055170 1055208 412 16 7848 4.0 6.5 5.2 2.6 7900 chr3L 1047308 intron bab1 - chr3L 1051258 intron bab1 - chr3L 1055208 intron bab1 - chr3L_16_1050001 chr3L_1050001 RAL-849 2112 chr3L 1063293 1063366 chr3L 1063719 1063792 27 425 4.5 4.0 4.2 5.2 499 chr3L 1063293 intron bab1 - chr3L 1063542 intron bab1 - chr3L 1063792 intron bab1 - chr3L_27_1060001 chr3L_1060001 RAL-849 2113 chr3L 1094978 1095032 chr3L 1095109 1095163 14 126 3.0 8.0 5.5 2.2 185 chr3L 1094978 intron bab1 - chr3L 1095070 intron bab1 - chr3L 1095163 intron bab1 - chr3L_14_1095001 chr3L_1095001 RAL-849 2114 chr3L 1103972 1104013 chr3L 1104207 1104254 15 240 8.5 13.5 11.0 1.2 282 chr3L 1103972 intergenic not near genes chr3L 1104113 intergenic not near genes chr3L 1104254 intergenic not near genes chr3L_15_1100001 chr3L_1100001 RAL-849 2115 chr3L 1109591 1109661 chr3L 1109729 1109787 30 137 0.0 11.0 5.5 4.6 196 chr3L 1109591 intergenic not near genes chr3L 1109689 intergenic not near genes chr3L 1109787 intergenic not near genes chr3L_30_1105001 chr3L_1105001 RAL-849 2116 chr3L 1145191 1145268 chr3L 1145320 1145400 13 127 5.5 0.0 2.8 3.4 209 chr3L 1145191 intron bab2 - chr3L 1145296 intron bab2 - chr3L 1145400 intron bab2 - chr3L_13_1145001 chr3L_1145001 RAL-849 2117 chr3L 1154083 1154160 chr3L 1163283 1163327 roo 24 9197 8.0 11.5 9.8 2.2 9244 chr3L 1154083 intron bab2 - chr3L 1158705 intron bab2 - chr3L 1163327 intron bab2 - chr3L_24_1155001 chr3L_1155001 RAL-849 2118 chr3L 1166973 1166986 chr3L 1167100 1167113 4 127 9.0 6.0 7.5 0.5 140 chr3L 1166973 intron bab2 - chr3L 1167043 intron bab2 - chr3L 1167113 intron bab2 - chr3L_4_1165001 chr3L_1165001 RAL-849 2119 chr3L 1182237 1182244 chr3L 1182362 1182370 4 126 8.5 21.0 14.8 0.3 133 chr3L 1182237 intergenic not near genes chr3L 1182304 intergenic not near genes chr3L 1182370 intergenic not near genes chr3L_4_1180001 chr3L_1180001 RAL-849 2120 chr3L 1219553 1219616 chr3L 1227336 1227399 412 23 7779 5.0 8.5 6.8 2.9 7846 chr3L 1219553 intron mwh + chr3L 1223476 intron mwh + chr3L 1227399 intron mwh + chr3L_23_1220001 chr3L_1220001 RAL-849 2121 chr3L 1268101 1268180 chr3L 1268338 1268420 25 235 5.5 0.0 2.8 6.6 319 chr3L 1268101 intron CG9134 + chr3L 1268260 intron CG9134 + chr3L 1268420 intron CG9134 + chr3L_25_1265001 chr3L_1265001 RAL-849 2122 chr3L 1289991 1290052 chr3L 1290141 1290208 37 151 0.0 9.5 4.8 6.4 217 chr3L 1289991 intron CG32333 + chr3L 1290100 intron CG32333 + chr3L 1290208 intron CG32333 + chr3L_37_1290001 chr3L_1290001 RAL-849 2123 chr3L 1396688 1396756 chr3L 1396822 1396873 22 130 12.5 9.0 10.8 1.9 185 chr3L 1396688 intron Ptp61F - chr3L 1396780 intron Ptp61F - chr3L 1396873 intron Ptp61F - chr3L_22_1395001 chr3L_1395001 RAL-849 2124 chr3L 1415727 1415807 chr3L 1415859 1415893 29 127 5.0 9.0 7.0 3.6 166 chr3L 1415727 intron Ptp61F - chr3L 1415810 intron Ptp61F - chr3L 1415893 intron Ptp61F - chr3L_29_1415001 chr3L_1415001 RAL-849 2125 chr3L 1424765 1424773 chr3L 1430032 1430075 Rt1a 4 5293 1.5 16.0 8.8 0.4 5310 chr3L 1424765 intron Ptp61F - chr3L 1427420 intron Ptp61F - chr3L 1430075 intron Ptp61F - chr3L_4_1425001 chr3L_1425001 RAL-849 2126 chr3L 1479530 1479559 chr3L 1479861 1479884 5 330 14.5 8.5 11.5 0.4 354 chr3L 1479530 intron stet - chr3L 1479707 intron stet - chr3L 1479884 intron stet - chr3L_5_1475001 chr3L_1475001 RAL-849 2127 chr3L 1479560 1479610 chr3L 1479858 1479901 23 311 4.5 8.0 6.2 3.2 341 chr3L 1479560 intron stet - chr3L 1479730 intron stet - chr3L 1479901 intron stet - chr3L_23_1475001 chr3L_1475001 RAL-849 2128 chr3L 1485687 1485739 chr3L 1486908 1486960 1360 20 1214 9.0 15.0 12.0 1.5 1273 chr3L 1485687 intron stet - chr3L 1486324 intron stet - chr3L 1486960 intron stet - chr3L_20_1485001 chr3L_1485001 RAL-849 2129 chr3L 1501962 1502019 chr3L 1502083 1502150 31 128 1.0 4.5 2.8 8.2 188 chr3L 1501962 intron pUf68 - chr3L 1502056 intron pUf68 - chr3L 1502150 intron pUf68 - chr3L_31_1500001 chr3L_1500001 RAL-849 2130 chr3L 1505960 1506021 chr3L 1513607 1513668 17.6 22 7647 12.0 10.5 11.2 1.8 7708 chr3L 1505960 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513668 intron,intron Psa +,cue - chr3L_22_1505001 chr3L_1505001 RAL-849 2131 chr3L 1526793 1526861 chr3L 1526942 1527007 42 149 12.5 10.0 11.2 3.4 214 chr3L 1526793 intron CG12090 - chr3L 1526900 intron CG12090 - chr3L 1527007 intron CG12090 - chr3L_42_1525001 chr3L_1525001 RAL-849 2132 chr3L 1571424 1571489 chr3L 1571559 1571623 25 135 5.0 9.0 7.0 3.1 199 chr3L 1571424 intron CG12004 + chr3L 1571524 intron CG12004 + chr3L 1571623 intron CG12004 + chr3L_25_1570001 chr3L_1570001 RAL-849 2133 chr3L 1585874 1585938 chr3L 1586007 1586066 15 133 0.0 2.0 1.0 7.5 192 chr3L 1585874 intron CG13917 + chr3L 1585970 intron CG13917 + chr3L 1586066 intron CG13917 + chr3L_15_1585001 chr3L_1585001 RAL-849 2134 chr3L 1673537 1673592 chr3L 1673670 1673724 23 131 12.0 8.0 10.0 2.1 187 chr3L 1673537 intergenic not near genes chr3L 1673630 intergenic not near genes chr3L 1673724 intergenic not near genes chr3L_23_1670001 chr3L_1670001 RAL-849 2135 chr3L 1688247 1688259 chr3L 1688426 1688438 4 179 5.5 12.0 8.8 0.4 191 chr3L 1688247 intron CG7991 + chr3L 1688342 intron CG7991 + chr3L 1688438 intron CG7991 + chr3L_4_1685001 chr3L_1685001 RAL-849 2136 chr3L 1740808 1740879 chr3L 1741102 1741172 pogo 17 291 8.0 6.0 7.0 2.1 364 chr3L 1740808 intron Gk + chr3L 1740990 intron Gk + chr3L 1741172 intron Gk + chr3L_17_1740001 chr3L_1740001 RAL-849 2137 chr3L 1852996 1853046 chr3L 1853130 1853180 20 134 6.5 7.0 6.8 2.6 184 chr3L 1852996 intron CG13936 - chr3L 1853088 intron CG13936 - chr3L 1853180 intron CG13936 - chr3L_20_1850001 chr3L_1850001 RAL-849 2138 chr3L 1883291 1883336 chr3L 1883428 1883474 13 136 5.5 0.5 3.0 3.2 183 chr3L 1883291 intergenic CG13937 - chr3L 1883382 intergenic CG13937 - chr3L 1883474 intergenic Aprt -,CG13937 - chr3L_13_1880001 chr3L_1880001 RAL-849 2139 chr3L 1905320 1905374 chr3L 1905464 1905518 11 144 14.0 9.0 11.5 0.9 198 chr3L 1905320 intron CG1887 - chr3L 1905419 intron CG1887 - chr3L 1905518 intron CG1887 - chr3L_11_1905001 chr3L_1905001 RAL-849 2140 chr3L 1922415 1922421 chr3L 1922543 1922544 5 127 19.5 11.0 15.2 0.3 129 chr3L 1922415 intron Dbx + chr3L 1922480 intron Dbx + chr3L 1922544 intron Dbx + chr3L_5_1920001 chr3L_1920001 RAL-849 2141 chr3L 1922422 1922465 chr3L 1922540 1922593 16 124 12.5 11.5 12.0 1.2 171 chr3L 1922422 intron Dbx + chr3L 1922508 intron Dbx + chr3L 1922593 intron Dbx + chr3L_16_1920001 chr3L_1920001 RAL-849 2142 chr3L 1922963 1923031 chr3L 1923103 1923167 22 135 1.5 6.5 4.0 4.4 204 chr3L 1922963 intron Dbx + chr3L 1923065 intron Dbx + chr3L 1923167 intron Dbx + chr3L_22_1920001 chr3L_1920001 RAL-849 2143 chr3L 1924912 1924971 chr3L 1925100 1925159 21 187 6.0 6.0 6.0 3.0 247 chr3L 1924912 exon Dbx + chr3L 1925036 intron Dbx + chr3L 1925159 intron Dbx + chr3L_21_1925001 chr3L_1925001 RAL-849 2144 chr3L 2108210 2108271 chr3L 2113464 2113525 copia 15 5254 6.5 6.5 6.5 2.0 5315 chr3L 2108210 intron sls - chr3L 2110868 intron sls - chr3L 2113525 intron sls - chr3L_15_2110001 chr3L_2110001 RAL-849 2145 chr3L 2199782 2199785 chr3L 2199908 2199911 4 125 11.0 11.5 11.2 0.3 129 chr3L 2199782 intergenic not near genes chr3L 2199846 intergenic not near genes chr3L 2199911 intergenic not near genes chr3L_4_2195001 chr3L_2195001 RAL-849 2146 chr3L 2199790 2199817 chr3L 2199907 2199943 16 125 5.5 11.0 8.2 1.7 153 chr3L 2199790 intergenic not near genes chr3L 2199866 intergenic not near genes chr3L 2199943 intergenic not near genes chr3L_16_2195001 chr3L_2195001 RAL-849 2147 chr3L 2307955 2308029 chr3L 2308111 2308185 16 155 8.5 4.5 6.5 2.1 230 chr3L 2307955 intergenic not near genes chr3L 2308070 intergenic not near genes chr3L 2308185 intergenic not near genes chr3L_16_2305001 chr3L_2305001 RAL-849 2148 chr3L 2317519 2317588 chr3L 2319383 2319452 35 1863 8.0 5.5 6.8 4.5 1933 chr3L 2317519 3` UTR CR45427 - chr3L 2318486 intergenic not near genes chr3L 2319452 3` UTR CR45426 - chr3L_35_2315001 chr3L_2315001 RAL-849 2149 chr3L 2331539 2331610 chr3L 2331666 2331737 24 126 8.0 10.0 9.0 2.4 198 chr3L 2331539 intron MsR1 + chr3L 2331638 intron MsR1 + chr3L 2331737 intron MsR1 + chr3L_24_2330001 chr3L_2330001 RAL-849 2150 chr3L 2355404 2355464 chr3L 2355642 2355702 10 238 3.0 0.0 1.5 4.0 298 chr3L 2355404 intergenic not near genes chr3L 2355553 intergenic not near genes chr3L 2355702 intergenic not near genes chr3L_10_2355001 chr3L_2355001 RAL-849 2151 chr3L 2357695 2357750 chr3L 2358026 2358083 14 330 7.0 8.5 7.8 1.6 388 chr3L 2357695 intergenic not near genes chr3L 2357889 intergenic not near genes chr3L 2358083 intergenic not near genes chr3L_14_2355001 chr3L_2355001 RAL-849 2152 chr3L 2366043 2366060 chr3L 2366178 2366195 8 135 9.5 6.5 8.0 0.9 152 chr3L 2366043 intergenic not near genes chr3L 2366119 intergenic not near genes chr3L 2366195 intergenic not near genes chr3L_8_2365001 chr3L_2365001 RAL-849 2153 chr3L 2366062 2366116 chr3L 2366177 2366251 17 134 9.0 6.5 7.8 1.9 189 chr3L 2366062 intergenic not near genes chr3L 2366156 intergenic not near genes chr3L 2366251 intergenic not near genes chr3L_17_2365001 chr3L_2365001 RAL-849 2154 chr3L 2447463 2447530 chr3L 2456668 2456736 roo 28 9205 11.0 6.5 8.8 2.9 9273 chr3L 2447463 intron CG45186 + chr3L 2452100 intron CG45186 + chr3L 2456736 intron CG45186 + chr3L_28_2450001 chr3L_2450001 RAL-849 2155 chr3L 2467450 2467480 chr3L 2467597 2467627 7 147 4.5 14.0 9.2 0.7 177 chr3L 2467450 intron CG45186 + chr3L 2467538 intron CG45186 + chr3L 2467627 intron CG45186 + chr3L_7_2465001 chr3L_2465001 RAL-849 2156 chr3L 2483111 2483160 chr3L 2483236 2483282 13 125 8.5 7.5 8.0 1.4 171 chr3L 2483111 intron CG45186 + chr3L 2483196 intron CG45186 + chr3L 2483282 intron CG45186 + chr3L_13_2480001 chr3L_2480001 RAL-849 2157 chr3L 2515361 2515415 chr3L 2515495 2515547 23 133 8.0 9.0 8.5 2.4 186 chr3L 2515361 intron Spn - chr3L 2515454 intron Spn - chr3L 2515547 intron Spn - chr3L_23_2515001 chr3L_2515001 RAL-849 2158 chr3L 2533620 2533672 chr3L 2533740 2533789 20 125 8.0 8.5 8.2 2.2 169 chr3L 2533620 intron Spn - chr3L 2533704 intron Spn - chr3L 2533789 intron Spn - chr3L_20_2530001 chr3L_2530001 RAL-849 2159 chr3L 2546712 2546794 chr3L 2546851 2546933 5 139 1.0 3.0 2.0 1.7 221 chr3L 2546712 intron Spn - chr3L 2546822 intron Spn - chr3L 2546933 intron Spn - chr3L_5_2545001 chr3L_2545001 RAL-849 2160 chr3L 2561486 2561552 chr3L 2561613 2561679 21 127 6.5 7.5 7.0 2.6 193 chr3L 2561486 intron msn - chr3L 2561582 intron msn - chr3L 2561679 intron msn - chr3L_21_2560001 chr3L_2560001 RAL-849 2161 chr3L 2575965 2575980 chr3L 2576098 2576113 6 133 17.0 8.0 12.5 0.4 148 chr3L 2575965 intron msn - chr3L 2576039 intron msn - chr3L 2576113 intron msn - chr3L_6_2575001 chr3L_2575001 RAL-849 2162 chr3L 2590827 2590909 chr3L 2590972 2591059 15 149 4.5 5.5 5.0 2.5 232 chr3L 2590827 intron dos + chr3L 2590943 intron dos + chr3L 2591059 intron dos + chr3L_15_2590001 chr3L_2590001 RAL-849 2163 chr3L 2626038 2626100 chr3L 2626189 2626251 30 150 10.0 7.5 8.8 3.1 213 chr3L 2626038 intron Pxn - chr3L 2626144 intron Pxn - chr3L 2626251 intron Pxn - chr3L_30_2625001 chr3L_2625001 RAL-849 2164 chr3L 2674736 2674804 chr3L 2674867 2674935 27 129 5.0 0.5 2.8 7.1 199 chr3L 2674736 intron Fife - chr3L 2674836 intron Fife - chr3L 2674935 intron Fife - chr3L_27_2670001 chr3L_2670001 RAL-849 2165 chr3L 2683910 2683973 chr3L 2684036 2684099 18 126 8.0 7.0 7.5 2.1 189 chr3L 2683910 intron Fife - chr3L 2684004 intron Fife - chr3L 2684099 intron Fife - chr3L_18_2680001 chr3L_2680001 RAL-849 2166 chr3L 2699477 2699555 chr3L 2699625 2699698 30 147 7.5 7.5 7.5 3.5 221 chr3L 2699477 intron Fife - chr3L 2699588 intron Fife - chr3L 2699698 intron Fife - chr3L_30_2695001 chr3L_2695001 RAL-849 2167 chr3L 2731473 2731543 chr3L 2731605 2731675 25 130 5.5 7.5 6.5 3.3 202 chr3L 2731473 intron Mrtf - chr3L 2731574 intron Mrtf - chr3L 2731675 intron Mrtf - chr3L_25_2730001 chr3L_2730001 RAL-849 2168 chr3L 2751414 2751454 chr3L 2755759 2755799 F-element 11 4345 6.0 12.0 9.0 1.1 4385 chr3L 2751414 intron Mrtf - chr3L 2753606 intron Mrtf - chr3L 2755799 intron Mrtf - chr3L_11_2750001 chr3L_2750001 RAL-849 2169 chr3L 2795674 2795746 chr3L 2795848 2795919 14 169 4.5 4.5 4.5 2.5 245 chr3L 2795674 intron CG43444 - chr3L 2795796 intron CG43444 - chr3L 2795919 intron CG43444 - chr3L_14_2795001 chr3L_2795001 RAL-849 2170 chr3L 2835842 2835853 chr3L 2835972 2835983 6 129 12.0 14.0 13.0 0.4 141 chr3L 2835842 intron CG43444 - chr3L 2835912 intron CG43444 - chr3L 2835983 intron CG43444 - chr3L_6_2835001 chr3L_2835001 RAL-849 2171 chr3L 2835854 2835870 chr3L 2835964 2836000 9 125 10.0 14.5 12.2 0.7 146 chr3L 2835854 intron CG43444 - chr3L 2835927 intron CG43444 - chr3L 2836000 intron CG43444 - chr3L_9_2835001 chr3L_2835001 RAL-849 2172 chr3L 2854433 2854504 chr3L 2854561 2854631 22 126 4.0 6.5 5.2 3.5 198 chr3L 2854433 intron CG43444 - chr3L 2854532 intron CG43444 - chr3L 2854631 intron CG43444 - chr3L_22_2850001 chr3L_2850001 RAL-849 2173 chr3L 2863761 2863820 chr3L 2863891 2863950 11 130 0.0 0.5 0.2 9.2 189 chr3L 2863761 intron CG43444 - chr3L 2863856 intron CG43444 - chr3L 2863950 intron CG43444 - chr3L_11_2860001 chr3L_2860001 RAL-849 2174 chr3L 2921601 2921663 chr3L 2921797 2921861 23 197 9.5 9.0 9.2 2.3 260 chr3L 2921601 intron Shab + chr3L 2921731 intron Shab + chr3L 2921861 intron Shab + chr3L_23_2920001 chr3L_2920001 RAL-849 2175 chr3L 2927796 2927871 chr3L 2936123 2936197 Tirant 16 8324 3.5 5.5 4.5 2.9 8401 chr3L 2927796 intron Shab + chr3L 2931996 intron Shab + chr3L 2936197 intron Shab + chr3L_16_2930001 chr3L_2930001 RAL-849 2176 chr3L 2978920 2978941 chr3L 2979046 2979067 12 126 6.0 8.0 7.0 1.5 147 chr3L 2978920 intergenic not near genes chr3L 2978994 intergenic not near genes chr3L 2979067 intergenic not near genes chr3L_12_2975001 chr3L_2975001 RAL-849 2177 chr3L 2987666 2987702 chr3L 2987797 2987822 16 130 14.0 0.0 7.0 2.0 156 chr3L 2987666 intergenic not near genes chr3L 2987744 intergenic not near genes chr3L 2987822 intergenic not near genes chr3L_16_2985001 chr3L_2985001 RAL-849 2178 chr3L 3028957 3029018 chr3L 3029093 3029154 9 136 3.5 4.0 3.8 1.9 197 chr3L 3028957 intergenic not near genes chr3L 3029056 intergenic not near genes chr3L 3029154 intergenic not near genes chr3L_9_3025001 chr3L_3025001 RAL-849 2179 chr3L 3040279 3040330 chr3L 3042118 3042169 S-element 10 1839 10.5 5.5 8.0 1.1 1890 chr3L 3040279 3` UTR CG2162 + chr3L 3041224 intergenic not near genes chr3L 3042169 intergenic Jafrac2 + chr3L_10_3040001 chr3L_3040001 RAL-849 2180 chr3L 3051582 3051719 chr3L 3051715 3052011 25 184 0.5 0.5 0.5 16.7 429 chr3L 3051582 3` UTR CG32485 + chr3L 3051796 intergenic CG32485 + chr3L 3052011 intergenic CG32485 + chr3L_25_3050001 chr3L_3050001 RAL-849 2181 chr3L 3051734 3051757 chr3L 3052029 3052052 pogo 7 295 0.5 14.5 7.5 0.8 318 chr3L 3051734 3` UTR CG32485 + chr3L 3051893 intergenic CG32485 + chr3L 3052052 intergenic CG32485 +,CG1271 + chr3L_7_3050001 chr3L_3050001 RAL-849 2182 chr3L 3057202 3057276 chr3L 3057396 3057470 48 194 11.5 9.5 10.5 4.2 268 chr3L 3057202 exon CG32486 - chr3L 3057336 intron CG32486 - chr3L 3057470 exon CG32486 - chr3L_48_3055001 chr3L_3055001 RAL-849 2183 chr3L 3061274 3061291 chr3L 3069882 3069905 Tirant 4 8620 11.5 5.5 8.5 0.4 8631 chr3L 3061274 intron CG32486 - chr3L 3065590 intron CG32486 - chr3L 3069905 intron CG32486 - chr3L_4_3065001 chr3L_3065001 RAL-849 2184 chr3L 3061303 3061312 chr3L 3069870 3069906 Tirant 5 8600 6.0 5.0 5.5 0.8 8603 chr3L 3061303 intron CG32486 - chr3L 3065604 intron CG32486 - chr3L 3069906 intron CG32486 - chr3L_5_3065001 chr3L_3065001 RAL-849 2185 chr3L 3252296 3252358 chr3L 3252422 3252484 7 126 6.0 3.5 4.8 1.2 188 chr3L 3252296 5` UTR CR43626 + chr3L 3252390 5` UTR CR43626 + chr3L 3252484 5` UTR CR43626 + chr3L_7_3250001 chr3L_3250001 RAL-849 2186 chr3L 3263672 3263727 chr3L 3263805 3263844 13 132 0.5 6.0 3.2 3.1 172 chr3L 3263672 intron ckd + chr3L 3263758 intron ckd + chr3L 3263844 intron ckd + chr3L_13_3260001 chr3L_3260001 RAL-849 2187 chr3L 3281399 3281405 chr3L 3281940 3281951 Doc 5 543 26.0 15.5 20.8 0.2 552 chr3L 3281399 intron CG12017 + chr3L 3281675 intron CG12017 + chr3L 3281951 intron CG12017 + chr3L_5_3280001 chr3L_3280001 RAL-849 2188 chr3L 3281408 3281417 chr3L 3281939 3281963 Doc 4 542 22.5 15.5 19.0 0.2 555 chr3L 3281408 intron CG12017 + chr3L 3281686 intron CG12017 + chr3L 3281963 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-849 2189 chr3L 3281429 3281451 chr3L 3281936 3281997 Doc 14 537 9.0 15.0 12.0 1.1 568 chr3L 3281429 intron CG12017 + chr3L 3281713 intron CG12017 + chr3L 3281997 intron CG12017 + chr3L_14_3280001 chr3L_3280001 RAL-849 2190 chr3L 3281454 3281469 chr3L 3281933 3282000 Doc 11 527 6.0 14.0 10.0 1.0 546 chr3L 3281454 intron CG12017 + chr3L 3281727 intron CG12017 + chr3L 3282000 intron CG12017 + chr3L_11_3280001 chr3L_3280001 RAL-849 2191 chr3L 3285590 3285666 chr3L 3285723 3285799 33 132 7.0 8.0 7.5 3.9 209 chr3L 3285590 intron CG12017 + chr3L 3285694 intron CG12017 + chr3L 3285799 intron CG12017 + chr3L_33_3285001 chr3L_3285001 RAL-849 2192 chr3L 3315944 3316000 chr3L 3316080 3316150 14 149 6.0 7.0 6.5 1.9 206 chr3L 3315944 intergenic Drsl4 + chr3L 3316047 intergenic Drsl4 + chr3L 3316150 intergenic Drsl4 + chr3L_14_3315001 chr3L_3315001 RAL-849 2193 chr3L 3431357 3431378 chr3L 3432046 3432062 6 688 17.5 10.5 14.0 0.4 705 chr3L 3431357 intron eIF5B - chr3L 3431710 intron eIF5B - chr3L 3432062 intron eIF5B - chr3L_6_3430001 chr3L_3430001 RAL-849 2194 chr3L 3431379 3431431 chr3L 3432040 3432105 20 677 9.0 9.5 9.2 2.0 726 chr3L 3431379 intron eIF5B - chr3L 3431742 intron eIF5B - chr3L 3432105 intron eIF5B - chr3L_20_3430001 chr3L_3430001 RAL-849 2195 chr3L 3436238 3436311 chr3L 3436367 3436440 31 129 6.0 7.5 6.8 4.0 202 chr3L 3436238 intron eIF5B - chr3L 3436339 intron eIF5B - chr3L 3436440 intron eIF5B - chr3L_31_3435001 chr3L_3435001 RAL-849 2196 chr3L 3449216 3449235 chr3L 3449344 3449363 12 127 5.0 7.0 6.0 1.7 147 chr3L 3449216 intron eIF5B - chr3L 3449290 intron eIF5B - chr3L 3449363 intron eIF5B - chr3L_12_3445001 chr3L_3445001 RAL-849 2197 chr3L 3451328 3451380 chr3L 3451478 3451530 15 150 6.0 6.0 6.0 2.1 202 chr3L 3451328 intron eIF5B - chr3L 3451429 intron eIF5B - chr3L 3451530 intron eIF5B - chr3L_15_3450001 chr3L_3450001 RAL-849 2198 chr3L 3456406 3456475 chr3L 3456797 3456856 30 389 4.5 8.5 6.5 4.0 450 chr3L 3456406 intron eIF5B - chr3L 3456631 intron eIF5B - chr3L 3456856 intron eIF5B - chr3L_30_3455001 chr3L_3455001 RAL-849 2199 chr3L 3475046 3475069 chr3L 3475528 3475563 jockey 6 489 21.0 10.0 15.5 0.4 517 chr3L 3475046 intron CG42324 + chr3L 3475304 intron CG42324 + chr3L 3475563 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-849 2200 chr3L 3494149 3494203 chr3L 3494276 3494330 23 127 0.0 8.0 4.0 4.6 181 chr3L 3494149 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494330 intron CG42324 + chr3L_23_3490001 chr3L_3490001 RAL-849 2201 chr3L 3539913 3539966 chr3L 3540052 3540105 7 139 10.5 0.5 5.5 1.1 192 chr3L 3539913 intron Eip63E + chr3L 3540009 intron Eip63E + chr3L 3540105 intron Eip63E + chr3L_7_3540001 chr3L_3540001 RAL-849 2202 chr3L 3544364 3544408 chr3L 3544499 3544568 13 156 0.0 7.0 3.5 2.9 204 chr3L 3544364 intron Eip63E + chr3L 3544466 intron Eip63E + chr3L 3544568 intron Eip63E + chr3L_13_3540001 chr3L_3540001 RAL-849 2203 chr3L 3576006 3576077 chr3L 3576134 3576197 27 124 8.5 9.0 8.8 2.8 191 chr3L 3576006 intron Eip63E + chr3L 3576102 intron Eip63E + chr3L 3576197 intron Eip63E + chr3L_27_3575001 chr3L_3575001 RAL-849 2204 chr3L 3585548 3585626 chr3L 3585690 3585765 10 140 0.0 10.0 5.0 1.7 217 chr3L 3585548 intron Eip63E + chr3L 3585656 intron Eip63E + chr3L 3585765 intron Eip63E + chr3L_10_3585001 chr3L_3585001 RAL-849 2205 chr3L 3593847 3593872 chr3L 3593982 3594007 6 135 8.5 0.0 4.2 1.2 160 chr3L 3593847 intron,5` UTR Eip63E +,snRNA:U7 + chr3L 3593927 intron Eip63E + chr3L 3594007 intron Eip63E + chr3L_6_3590001 chr3L_3590001 RAL-849 2206 chr3L 3601260 3601328 chr3L 3606621 3606687 copia 23 5360 5.0 9.5 7.2 2.8 5427 chr3L 3601260 intron Eip63E + chr3L 3603974 intron Eip63E + chr3L 3606687 intron Eip63E + chr3L_23_3600001 chr3L_3600001 RAL-849 2207 chr3L 3691258 3691270 chr3L 3691401 3691418 8 147 8.0 0.0 4.0 1.6 160 chr3L 3691258 intergenic not near genes chr3L 3691338 intergenic not near genes chr3L 3691418 intergenic not near genes chr3L_8_3690001 chr3L_3690001 RAL-849 2208 chr3L 3763715 3763729 chr3L 3763846 3763860 7 131 8.5 0.0 4.2 1.3 145 chr3L 3763715 intron CG32264 - chr3L 3763788 intron CG32264 - chr3L 3763860 intron CG32264 - chr3L_7_3760001 chr3L_3760001 RAL-849 2209 chr3L 3766694 3766761 chr3L 3766830 3766897 11 133 4.5 3.5 4.0 2.2 203 chr3L 3766694 intron CG32264 - chr3L 3766796 intron CG32264 - chr3L 3766897 intron CG32264 - chr3L_11_3765001 chr3L_3765001 RAL-849 2210 chr3L 3772174 3772244 chr3L 3772307 3772359 21 129 5.5 5.5 5.5 3.2 185 chr3L 3772174 intron CG32264 - chr3L 3772266 intron CG32264 - chr3L 3772359 intron CG32264 - chr3L_21_3770001 chr3L_3770001 RAL-849 2211 chr3L 3796352 3796424 chr3L 3796735 3796803 23 383 6.0 4.5 5.2 3.7 451 chr3L 3796352 intron CG32264 - chr3L 3796578 intron CG32264 - chr3L 3796803 intron CG32264 - chr3L_23_3795001 chr3L_3795001 RAL-849 2212 chr3L 3797189 3797261 chr3L 3797322 3797394 17 133 0.0 7.5 3.8 3.5 205 chr3L 3797189 intron CG32264 - chr3L 3797292 intron CG32264 - chr3L 3797394 intron CG32264 - chr3L_17_3795001 chr3L_3795001 RAL-849 2213 chr3L 3815025 3815081 chr3L 3815156 3815212 14 131 6.5 11.5 9.0 1.4 187 chr3L 3815025 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815118 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815212 intron,3` UTR Scsalpha +,CR43932 - chr3L_14_3815001 chr3L_3815001 RAL-849 2214 chr3L 3833688 3833761 chr3L 3833979 3834052 pogo 15 291 6.0 4.0 5.0 2.5 364 chr3L 3833688 intron enc + chr3L 3833870 intron enc + chr3L 3834052 intron enc + chr3L_15_3830001 chr3L_3830001 RAL-849 2215 chr3L 3849436 3849470 chr3L 3849564 3849598 10 128 4.0 11.5 7.8 1.1 162 chr3L 3849436 intron Awh + chr3L 3849517 intron Awh + chr3L 3849598 intron Awh + chr3L_10_3845001 chr3L_3845001 RAL-849 2216 chr3L 3877425 3877452 chr3L 3877598 3877625 4 173 6.5 7.0 6.8 0.5 200 chr3L 3877425 intergenic not near genes chr3L 3877525 intergenic not near genes chr3L 3877625 intergenic not near genes chr3L_4_3875001 chr3L_3875001 RAL-849 2217 chr3L 3890920 3890956 chr3L 3891047 3891087 13 130 11.0 0.0 5.5 2.0 167 chr3L 3890920 intergenic not near genes chr3L 3891004 intergenic not near genes chr3L 3891087 intergenic not near genes chr3L_13_3890001 chr3L_3890001 RAL-849 2218 chr3L 3916649 3916722 chr3L 3917980 3918053 45 1327 6.5 9.0 7.8 5.1 1404 chr3L 3916649 intron Eip63F-1 - chr3L 3917351 intron Eip63F-1 - chr3L 3918053 intron Eip63F-1 - chr3L_45_3915001 chr3L_3915001 RAL-849 2219 chr3L 3925987 3926013 chr3L 3926130 3926156 7 143 11.0 0.0 5.5 1.1 169 chr3L 3925987 intron Eip63F-1 - chr3L 3926072 intron Eip63F-1 - chr3L 3926156 intron Eip63F-1 - chr3L_7_3925001 chr3L_3925001 RAL-849 2220 chr3L 3940795 3940806 chr3L 3940930 3940941 5 135 2.0 0.0 1.0 2.5 146 chr3L 3940795 intron CR43916 + chr3L 3940868 intron CR43916 + chr3L 3940941 intron CR43916 + chr3L_5_3940001 chr3L_3940001 RAL-849 2221 chr3L 3946144 3946161 chr3L 3946271 3946288 8 127 23.0 10.5 16.8 0.4 144 chr3L 3946144 exon CG14982 + chr3L 3946216 3` UTR CG14982 + chr3L 3946288 3` UTR CG14982 + chr3L_8_3945001 chr3L_3945001 RAL-849 2222 chr3L 3946163 3946221 chr3L 3946269 3946348 20 123 11.5 10.5 11.0 1.7 185 chr3L 3946163 3` UTR CG14982 + chr3L 3946256 3` UTR CG14982 + chr3L 3946348 3` UTR CG14982 + chr3L_20_3945001 chr3L_3945001 RAL-849 2223 chr3L 3981707 3981781 chr3L 3981840 3981914 25 133 10.0 8.0 9.0 2.5 207 chr3L 3981707 intergenic not near genes chr3L 3981810 intergenic not near genes chr3L 3981914 intergenic not near genes chr3L_25_3980001 chr3L_3980001 RAL-849 2224 chr3L 4022643 4022715 chr3L 4022792 4022865 24 149 9.0 6.5 7.8 2.7 222 chr3L 4022643 intron Mul1 + chr3L 4022754 intron Mul1 + chr3L 4022865 exon Mul1 + chr3L_24_4020001 chr3L_4020001 RAL-849 2225 chr3L 4146803 4146833 chr3L 4146935 4146965 13 132 0.0 11.5 5.8 1.9 162 chr3L 4146803 intergenic not near genes chr3L 4146884 intergenic not near genes chr3L 4146965 intergenic not near genes chr3L_13_4145001 chr3L_4145001 RAL-849 2226 chr3L 4298527 4298560 chr3L 4298646 4298688 22 127 17.5 5.5 11.5 1.8 161 chr3L 4298527 intron dyl - chr3L 4298608 5` UTR dyl - chr3L 4298688 5` UTR dyl - chr3L_22_4295001 chr3L_4295001 RAL-849 2227 chr3L 4328705 4328759 chr3L 4336251 4336305 412 9 7545 3.0 10.5 6.8 1.2 7600 chr3L 4328705 intron Cip4 - chr3L 4332505 intron Cip4 - chr3L 4336305 exon Cip4 - chr3L_9_4330001 chr3L_4330001 RAL-849 2228 chr3L 4341330 4341332 chr3L 21448026 21448026 14 17106695 29.5 31.5 30.5 0.4 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_14_12890001 chr3L_12890001 RAL-849 2229 chr3L 4341333 4341335 chr3L 21448024 21448026 9 17106692 29.5 31.0 30.2 0.3 17106693 chr3L 4341333 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_9_12890001 chr3L_12890001 RAL-849 2230 chr3L 4484671 4484737 chr3L 4484799 4484865 17 128 7.0 5.5 6.2 2.4 194 chr3L 4484671 intergenic CG11350 +,CG13722 - chr3L 4484768 intergenic CG13722 -,CG11350 + chr3L 4484865 intergenic CG13722 -,CG11350 + chr3L_17_4480001 chr3L_4480001 RAL-849 2231 chr3L 4491335 4491407 chr3L 4491478 4491520 25 138 3.0 0.0 1.5 10.0 185 chr3L 4491335 intergenic CG13722 - chr3L 4491428 intergenic CG13722 - chr3L 4491520 intergenic not near genes chr3L_25_4490001 chr3L_4490001 RAL-849 2232 chr3L 4516802 4516860 chr3L 4516929 4516987 23 127 7.5 9.5 8.5 2.4 185 chr3L 4516802 intron Tie - chr3L 4516894 intron Tie - chr3L 4516987 intron Tie - chr3L_23_4515001 chr3L_4515001 RAL-849 2233 chr3L 4522663 4522725 chr3L 4522792 4522853 30 129 5.0 8.0 6.5 4.0 190 chr3L 4522663 intron Tie - chr3L 4522758 intron Tie - chr3L 4522853 intron Tie - chr3L_30_4520001 chr3L_4520001 RAL-849 2234 chr3L 4675986 4676021 chr3L 4676117 4676152 11 131 8.5 4.5 6.5 1.5 166 chr3L 4675986 intron axo - chr3L 4676069 intron axo - chr3L 4676152 intron axo - chr3L_11_4675001 chr3L_4675001 RAL-849 2235 chr3L 4699251 4699315 chr3L 4699381 4699445 15 130 2.5 7.0 4.8 2.6 194 chr3L 4699251 intron RhoGEF64C + chr3L 4699348 intron RhoGEF64C + chr3L 4699445 intron RhoGEF64C + chr3L_15_4695001 chr3L_4695001 RAL-849 2236 chr3L 4700751 4700795 chr3L 4700895 4700939 7 144 10.5 0.0 5.2 1.1 188 chr3L 4700751 intron RhoGEF64C + chr3L 4700845 intron RhoGEF64C + chr3L 4700939 intron RhoGEF64C + chr3L_7_4700001 chr3L_4700001 RAL-849 2237 chr3L 4732654 4732728 chr3L 4735819 4735883 26 3164 4.0 11.0 7.5 3.1 3229 chr3L 4732654 intron RhoGEF64C + chr3L 4734268 intron RhoGEF64C + chr3L 4735883 intron RhoGEF64C + chr3L_26_4730001 chr3L_4730001 RAL-849 2238 chr3L 4748662 4748727 chr3L 4748803 4748868 29 138 5.5 4.5 5.0 4.8 206 chr3L 4748662 intron RhoGEF64C + chr3L 4748765 intron RhoGEF64C + chr3L 4748868 intron RhoGEF64C + chr3L_29_4745001 chr3L_4745001 RAL-849 2239 chr3L 4784922 4784991 chr3L 4785170 4785250 17 256 0.0 5.5 2.8 4.5 328 chr3L 4784922 intron RhoGEF64C + chr3L 4785086 intron RhoGEF64C + chr3L 4785250 intron RhoGEF64C + chr3L_17_4785001 chr3L_4785001 RAL-849 2240 chr3L 4789470 4789500 chr3L 4789559 4789606 8 101 9.5 11.5 10.5 0.7 136 chr3L 4789470 exon RhoGEF64C + chr3L 4789538 exon RhoGEF64C + chr3L 4789606 exon RhoGEF64C + chr3L_8_4785001 chr3L_4785001 RAL-849 2241 chr3L 4858269 4858291 chr3L 4858404 4858431 12 138 20.0 11.5 15.8 0.7 162 chr3L 4858269 intergenic not near genes chr3L 4858350 intergenic not near genes chr3L 4858431 intergenic not near genes chr3L_12_4855001 chr3L_4855001 RAL-849 2242 chr3L 4858296 4858332 chr3L 4858395 4858457 19 133 10.0 10.0 10.0 1.7 161 chr3L 4858296 intergenic not near genes chr3L 4858376 intergenic not near genes chr3L 4858457 intergenic not near genes chr3L_19_4855001 chr3L_4855001 RAL-849 2243 chr3L 4901090 4901145 chr3L 4907330 4907385 diver 28 6240 5.5 8.5 7.0 3.5 6295 chr3L 4901090 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907385 intergenic not near genes chr3L_28_4900001 chr3L_4900001 RAL-849 2244 chr3L 4907926 4907935 chr3L 4908052 4908061 5 126 12.0 4.5 8.2 0.5 135 chr3L 4907926 intergenic not near genes chr3L 4907994 intergenic not near genes chr3L 4908061 intergenic not near genes chr3L_5_4905001 chr3L_4905001 RAL-849 2245 chr3L 4989172 4989180 chr3L 4989312 4989320 8 140 0.0 0.0 0.0 8.0 148 chr3L 4989172 intron Con - chr3L 4989246 intron Con - chr3L 4989320 intron Con - chr3L_8_4985001 chr3L_4985001 RAL-849 2246 chr3L 4991352 4991415 chr3L 4991526 4991589 26 173 6.0 11.0 8.5 2.7 237 chr3L 4991352 intron Con - chr3L 4991470 intron Con - chr3L 4991589 intron Con - chr3L_26_4990001 chr3L_4990001 RAL-849 2247 chr3L 5003097 5003158 chr3L 5003225 5003294 19 136 6.5 7.5 7.0 2.4 197 chr3L 5003097 intron Con - chr3L 5003196 intron Con - chr3L 5003294 intron Con - chr3L_19_5000001 chr3L_5000001 RAL-849 2248 chr3L 5034114 5034189 chr3L 5043316 5043391 roo 16 9201 4.0 6.0 5.0 2.7 9277 chr3L 5034114 intron Con - chr3L 5038752 intron Con - chr3L 5043391 intron Con - chr3L_16_5035001 chr3L_5035001 RAL-849 2249 chr3L 5045413 5045473 chr3L 5050244 5050304 Doc 21 4831 10.5 14.0 12.2 1.6 4891 chr3L 5045413 5` UTR Con - chr3L 5047858 intron Con - chr3L 5050304 intron Con - chr3L_21_5045001 chr3L_5045001 RAL-849 2250 chr3L 5066247 5066251 chr3L 5066407 5066411 4 160 5.0 7.5 6.2 0.6 164 chr3L 5066247 intron Con - chr3L 5066329 intron Con - chr3L 5066411 intron Con - chr3L_4_5065001 chr3L_5065001 RAL-849 2251 chr3L 5080938 5080944 chr3L 5081068 5081074 4 130 0.0 0.0 0.0 4.0 136 chr3L 5080938 intergenic not near genes chr3L 5081006 intergenic not near genes chr3L 5081074 intergenic not near genes chr3L_4_5080001 chr3L_5080001 RAL-849 2252 chr3L 5101159 5101230 chr3L 5101283 5101360 22 129 4.0 4.5 4.2 4.2 201 chr3L 5101159 intergenic not near genes chr3L 5101260 intergenic not near genes chr3L 5101360 intergenic not near genes chr3L_22_5100001 chr3L_5100001 RAL-849 2253 chr3L 5103562 5103579 chr3L 5103692 5103709 7 130 13.0 0.0 6.5 0.9 147 chr3L 5103562 intergenic not near genes chr3L 5103636 intergenic not near genes chr3L 5103709 intergenic not near genes chr3L_7_5100001 chr3L_5100001 RAL-849 2254 chr3L 5104432 5104505 chr3L 5124616 5124689 20 20184 7.0 7.0 7.0 2.5 20257 chr3L 5104432 intergenic not near genes chr3L 5114560 intergenic not near genes chr3L 5124689 intergenic not near genes chr3L_20_5110001 chr3L_5110001 RAL-849 2255 chr3L 5203068 5203114 chr3L 5203222 5203268 19 154 5.0 8.0 6.5 2.5 200 chr3L 5203068 intron shep - chr3L 5203168 intron shep - chr3L 5203268 intron shep - chr3L_19_5200001 chr3L_5200001 RAL-849 2256 chr3L 5223422 5223448 chr3L 5223516 5223540 6 109 5.0 3.5 4.2 1.2 118 chr3L 5223422 intron shep - chr3L 5223481 intron shep - chr3L 5223540 intron shep - chr3L_6_5220001 chr3L_5220001 RAL-849 2257 chr3L 5251809 5251868 chr3L 5251938 5251997 7 129 4.0 4.5 4.2 1.3 188 chr3L 5251809 intron shep - chr3L 5251903 intron shep - chr3L 5251997 intron shep - chr3L_7_5250001 chr3L_5250001 RAL-849 2258 chr3L 5256656 5256697 chr3L 5256792 5256834 32 136 17.5 0.5 9.0 3.2 178 chr3L 5256656 intron shep - chr3L 5256745 intron shep - chr3L 5256834 intron shep - chr3L_32_5255001 chr3L_5255001 RAL-849 2259 chr3L 5261128 5261174 chr3L 5261257 5261303 14 129 7.0 8.0 7.5 1.6 175 chr3L 5261128 intron shep - chr3L 5261216 intron shep - chr3L 5261303 intron shep - chr3L_14_5260001 chr3L_5260001 RAL-849 2260 chr3L 5299122 5299131 chr3L 5306598 5306607 Quasimodo 4 7476 12.5 0.0 6.2 0.6 7485 chr3L 5299122 intergenic not near genes chr3L 5302864 intergenic not near genes chr3L 5306607 intergenic not near genes chr3L_4_5300001 chr3L_5300001 RAL-849 2261 chr3L 5306666 5306683 chr3L 5306805 5306822 11 139 0.0 0.0 0.0 11.0 156 chr3L 5306666 intergenic not near genes chr3L 5306744 intergenic not near genes chr3L 5306822 intergenic not near genes chr3L_11_5305001 chr3L_5305001 RAL-849 2262 chr3L 5315173 5315236 chr3L 5315648 5315711 28 475 9.0 11.5 10.2 2.5 538 chr3L 5315173 intergenic not near genes chr3L 5315442 intergenic not near genes chr3L 5315711 intergenic not near genes chr3L_28_5315001 chr3L_5315001 RAL-849 2263 chr3L 5327418 5327464 chr3L 5327553 5327599 21 135 11.0 8.0 9.5 2.0 181 chr3L 5327418 intergenic not near genes chr3L 5327508 intergenic not near genes chr3L 5327599 intergenic not near genes chr3L_21_5325001 chr3L_5325001 RAL-849 2264 chr3L 5375988 5376042 chr3L 5376117 5376171 13 128 9.0 7.5 8.2 1.4 183 chr3L 5375988 intergenic not near genes chr3L 5376080 intergenic not near genes chr3L 5376171 intergenic not near genes chr3L_13_5375001 chr3L_5375001 RAL-849 2265 chr3L 5393423 5393474 chr3L 5393635 5393686 11 212 3.5 4.0 3.8 2.3 263 chr3L 5393423 intergenic not near genes chr3L 5393554 intergenic not near genes chr3L 5393686 intergenic not near genes chr3L_11_5390001 chr3L_5390001 RAL-849 2266 chr3L 5396429 5396490 chr3L 5396566 5396627 17 137 6.5 7.5 7.0 2.1 198 chr3L 5396429 intergenic not near genes chr3L 5396528 intergenic not near genes chr3L 5396627 intergenic not near genes chr3L_17_5395001 chr3L_5395001 RAL-849 2267 chr3L 5399536 5399542 chr3L 5399673 5399679 4 137 8.0 0.0 4.0 0.8 143 chr3L 5399536 intergenic not near genes chr3L 5399608 intergenic not near genes chr3L 5399679 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-849 2268 chr3L 5504510 5504550 chr3L 5504638 5504678 14 128 11.0 5.5 8.2 1.5 168 chr3L 5504510 intron CG34342 - chr3L 5504594 intron CG34342 - chr3L 5504678 intron CG34342 - chr3L_14_5500001 chr3L_5500001 RAL-849 2269 chr3L 5520300 5520364 chr3L 5520457 5520521 18 157 7.5 5.5 6.5 2.4 221 chr3L 5520300 intron Lkr - chr3L 5520410 intron Lkr - chr3L 5520521 intron Lkr - chr3L_18_5520001 chr3L_5520001 RAL-849 2270 chr3L 5521965 5522028 chr3L 5522283 5522346 28 317 7.0 11.0 9.0 2.8 381 chr3L 5521965 intron Lkr - chr3L 5522156 intron Lkr - chr3L 5522346 intron Lkr - chr3L_28_5520001 chr3L_5520001 RAL-849 2271 chr3L 5526958 5527202 chr3L 5527109 5527357 18 153 0.0 0.0 0.0 18.0 399 chr3L 5526958 intron Lkr - chr3L 5527158 intron Lkr - chr3L 5527357 intron Lkr - chr3L_18_5525001 chr3L_5525001 RAL-849 2272 chr3L 5537687 5537749 chr3L 5538074 5538141 jockey 22 390 4.5 8.5 6.5 2.9 454 chr3L 5537687 intergenic not near genes chr3L 5537914 intergenic CG10625 - chr3L 5538141 intergenic CG10625 - chr3L_22_5535001 chr3L_5535001 RAL-849 2273 chr3L 5613448 5613498 chr3L 5613625 5613675 15 176 5.5 7.0 6.2 2.1 227 chr3L 5613448 intergenic not near genes chr3L 5613562 intergenic not near genes chr3L 5613675 intergenic not near genes chr3L_15_5610001 chr3L_5610001 RAL-849 2274 chr3L 5677799 5677846 chr3L 5677928 5677975 4 129 6.0 7.5 6.8 0.5 176 chr3L 5677799 intron sif + chr3L 5677887 intron sif + chr3L 5677975 intron sif + chr3L_4_5675001 chr3L_5675001 RAL-849 2275 chr3L 5683210 5683278 chr3L 5683348 5683410 17 135 5.5 7.0 6.2 2.4 200 chr3L 5683210 intron sif + chr3L 5683310 intron sif + chr3L 5683410 intron sif + chr3L_17_5680001 chr3L_5680001 RAL-849 2276 chr3L 5692300 5692351 chr3L 5692441 5692477 7 138 13.0 5.5 9.2 0.7 177 chr3L 5692300 intron sif + chr3L 5692388 intron sif + chr3L 5692477 intron sif + chr3L_7_5690001 chr3L_5690001 RAL-849 2277 chr3L 5707510 5707578 chr3L 5707767 5707835 27 256 6.0 7.0 6.5 3.6 325 chr3L 5707510 intron sif + chr3L 5707672 intron sif + chr3L 5707835 intron sif + chr3L_27_5705001 chr3L_5705001 RAL-849 2278 chr3L 5716370 5716434 chr3L 5716496 5716560 16 125 6.5 4.5 5.5 2.5 190 chr3L 5716370 intron sif + chr3L 5716465 intron sif + chr3L 5716560 intron sif + chr3L_16_5715001 chr3L_5715001 RAL-849 2279 chr3L 5727131 5727197 chr3L 5727654 5727720 22 514 4.5 6.0 5.2 3.5 589 chr3L 5727131 intron sif + chr3L 5727426 intron sif + chr3L 5727720 intron sif + chr3L_22_5725001 chr3L_5725001 RAL-849 2280 chr3L 5836113 5836125 chr3L 5836293 5836305 9 180 14.5 6.0 10.2 0.8 192 chr3L 5836113 intron vn - chr3L 5836209 intron vn - chr3L 5836305 intron vn - chr3L_9_5835001 chr3L_5835001 RAL-849 2281 chr3L 5836128 5836179 chr3L 5836287 5836344 20 175 7.0 4.5 5.8 2.9 216 chr3L 5836128 intron vn - chr3L 5836236 intron vn - chr3L 5836344 intron vn - chr3L_20_5835001 chr3L_5835001 RAL-849 2282 chr3L 5869397 5869415 chr3L 5869596 5869614 7 199 11.5 0.0 5.8 1.0 217 chr3L 5869397 intergenic not near genes chr3L 5869506 intergenic not near genes chr3L 5869614 intergenic not near genes chr3L_7_5865001 chr3L_5865001 RAL-849 2283 chr3L 5869440 5869465 chr3L 5869626 5869651 10 186 5.0 0.0 2.5 2.9 211 chr3L 5869440 intergenic not near genes chr3L 5869546 intergenic not near genes chr3L 5869651 intergenic not near genes chr3L_10_5865001 chr3L_5865001 RAL-849 2284 chr3L 5909990 5910054 chr3L 5910281 5910322 pogo 18 289 11.0 6.0 8.5 1.9 332 chr3L 5909990 intron CG13288 + chr3L 5910156 intron CG13288 + chr3L 5910322 intron CG13288 + chr3L_18_5910001 chr3L_5910001 RAL-849 2285 chr3L 5926271 5926283 chr3L 5926511 5926523 4 240 18.5 11.5 15.0 0.2 252 chr3L 5926271 intron Vap-33B + chr3L 5926397 intron Vap-33B + chr3L 5926523 intron Vap-33B + chr3L_4_5925001 chr3L_5925001 RAL-849 2286 chr3L 5926288 5926309 chr3L 5926510 5926549 BS 6 236 14.0 11.5 12.8 0.4 261 chr3L 5926288 intron Vap-33B + chr3L 5926418 intron Vap-33B + chr3L 5926549 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-849 2287 chr3L 5926323 5926345 chr3L 5926506 5926587 BS 5 230 5.5 11.0 8.2 0.5 264 chr3L 5926323 intron Vap-33B + chr3L 5926455 intron Vap-33B + chr3L 5926587 intron Vap-33B + chr3L_5_5925001 chr3L_5925001 RAL-849 2288 chr3L 6001638 6001708 chr3L 6004388 6004458 jockey 20 2750 7.5 4.5 6.0 2.9 2820 chr3L 6001638 intron PVRAP + chr3L 6003048 intron PVRAP + chr3L 6004458 intron PVRAP + chr3L_20_6000001 chr3L_6000001 RAL-849 2289 chr3L 6022211 6022247 chr3L 6022335 6022381 16 131 13.5 0.0 6.8 2.1 170 chr3L 6022211 intron PVRAP + chr3L 6022296 intron PVRAP + chr3L 6022381 intron PVRAP + chr3L_16_6020001 chr3L_6020001 RAL-849 2290 chr3L 6029819 6029884 chr3L 6029958 6030023 17 139 6.0 4.0 5.0 2.8 204 chr3L 6029819 intergenic not near genes chr3L 6029921 intergenic not near genes chr3L 6030023 intergenic not near genes chr3L_17_6025001 chr3L_6025001 RAL-849 2291 chr3L 6040316 6040388 chr3L 6042722 6042794 Doc 23 2406 6.0 6.0 6.0 3.3 2478 chr3L 6040316 intergenic Jon65Aiv + chr3L 6041555 intergenic not near genes chr3L 6042794 intergenic not near genes chr3L_23_6040001 chr3L_6040001 RAL-849 2292 chr3L 6052112 6052150 chr3L 6052248 6052281 10 136 4.0 10.5 7.2 1.2 169 chr3L 6052112 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052196 intergenic Jon65Aii + chr3L 6052281 intergenic Jon65Aii + chr3L_10_6050001 chr3L_6050001 RAL-849 2293 chr3L 6052632 6052643 chr3L 6052745 6052772 6 126 19.0 15.5 17.2 0.3 140 chr3L 6052632 exon Jon65Aii + chr3L 6052702 intron Jon65Aii + chr3L 6052772 exon Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-849 2294 chr3L 6064963 6065037 chr3L 6065090 6065164 10 127 5.0 3.5 4.2 1.9 201 chr3L 6064963 intergenic not near genes chr3L 6065064 intergenic not near genes chr3L 6065164 intergenic not near genes chr3L_10_6065001 chr3L_6065001 RAL-849 2295 chr3L 6119139 6119165 chr3L 6119266 6119292 6 127 6.0 13.5 9.8 0.6 153 chr3L 6119139 exon Ets65A + chr3L 6119216 intron Ets65A + chr3L 6119292 intron Ets65A + chr3L_6_6115001 chr3L_6115001 RAL-849 2296 chr3L 6129145 6129217 chr3L 6129405 6129477 27 260 6.0 11.5 8.8 2.8 332 chr3L 6129145 intergenic l(3)mbn - chr3L 6129311 intergenic not near genes chr3L 6129477 intergenic not near genes chr3L_27_6125001 chr3L_6125001 RAL-849 2297 chr3L 6162308 6162383 chr3L 6162438 6162487 14 125 4.5 7.0 5.8 2.1 179 chr3L 6162308 intergenic CR45744 - chr3L 6162398 intergenic CR45744 - chr3L 6162487 intergenic CR45744 - chr3L_14_6160001 chr3L_6160001 RAL-849 2298 chr3L 6220876 6220939 chr3L 6230078 6230136 roo 33 9201 9.0 10.5 9.8 3.1 9260 chr3L 6220876 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230136 intergenic not near genes chr3L_33_6225001 chr3L_6225001 RAL-849 2299 chr3L 6293735 6293784 chr3L 6293867 6293909 15 132 8.0 12.0 10.0 1.4 174 chr3L 6293735 intergenic not near genes chr3L 6293822 intergenic not near genes chr3L 6293909 intergenic not near genes chr3L_15_6290001 chr3L_6290001 RAL-849 2300 chr3L 6334966 6335031 chr3L 6335487 6335552 297 31 520 9.5 6.5 8.0 3.4 586 chr3L 6334966 intron CG13300 - chr3L 6335259 intron CG13300 - chr3L 6335552 intron CG13300 - chr3L_31_6335001 chr3L_6335001 RAL-849 2301 chr3L 6353332 6353402 chr3L 6353462 6353519 21 117 6.5 8.5 7.5 2.5 187 chr3L 6353332 intergenic not near genes chr3L 6353426 intergenic not near genes chr3L 6353519 intergenic not near genes chr3L_21_6350001 chr3L_6350001 RAL-849 2302 chr3L 6369716 6369768 chr3L 6369870 6369922 9 154 9.0 0.0 4.5 1.6 206 chr3L 6369716 intergenic CR45419 - chr3L 6369819 intergenic CR45419 - chr3L 6369922 intergenic CR45419 - chr3L_9_6365001 chr3L_6365001 RAL-849 2303 chr3L 6372378 6372449 chr3L 6372579 6372650 13 199 0.0 6.0 3.0 3.2 272 chr3L 6372378 intergenic not near genes chr3L 6372514 intergenic not near genes chr3L 6372650 intergenic not near genes chr3L_13_6370001 chr3L_6370001 RAL-849 2304 chr3L 6405627 6405678 chr3L 6432141 6432192 roo 11 26514 7.0 10.5 8.8 1.1 26565 chr3L 6405627 intron CG42747 + chr3L 6418910 intron CG42747 + chr3L 6432192 intron CG42747 + chr3L_11_6415001 chr3L_6415001 RAL-849 2305 chr3L 6442155 6442155 chr3L 6442319 6442395 26 169 47.0 65.0 56.0 0.5 240 chr3L 6442155 intron CG42747 + chr3L 6442275 intron CG42747 + chr3L 6442395 intron CG42747 + chr3L_26_6440001 chr3L_6440001 RAL-849 2306 chr3L 6524700 6524764 chr3L 6524846 6524910 17 145 4.0 6.0 5.0 2.8 210 chr3L 6524700 intron sfl + chr3L 6524805 intron sfl + chr3L 6524910 intron sfl + chr3L_17_6520001 chr3L_6520001 RAL-849 2307 chr3L 6525603 6525660 chr3L 6525733 6525790 21 128 5.5 10.5 8.0 2.3 187 chr3L 6525603 intron sfl + chr3L 6525696 intron sfl + chr3L 6525790 intron sfl + chr3L_21_6525001 chr3L_6525001 RAL-849 2308 chr3L 6525663 6525670 chr3L 6525721 6525800 5 116 5.0 8.0 6.5 0.7 137 chr3L 6525663 intron sfl + chr3L 6525732 intron sfl + chr3L 6525800 intron sfl + chr3L_5_6525001 chr3L_6525001 RAL-849 2309 chr3L 6563042 6563095 chr3L 6563182 6563235 18 139 5.0 9.5 7.2 2.2 193 chr3L 6563042 intron CG18769 + chr3L 6563138 intron CG18769 + chr3L 6563235 intron,3` UTR CG18769 +,jv - chr3L_18_6560001 chr3L_6560001 RAL-849 2310 chr3L 6610146 6610164 chr3L 6610301 6610319 11 154 23.5 6.5 15.0 0.7 173 chr3L 6610146 intron CG8398 + chr3L 6610232 intron CG8398 + chr3L 6610319 intron CG8398 + chr3L_11_6610001 chr3L_6610001 RAL-849 2311 chr3L 6610165 6610218 chr3L 6610298 6610373 21 151 7.5 5.0 6.2 2.9 208 chr3L 6610165 intron CG8398 + chr3L 6610269 intron CG8398 + chr3L 6610373 intron CG8398 + chr3L_21_6610001 chr3L_6610001 RAL-849 2312 chr3L 6619225 6619293 chr3L 6619438 6619506 25 210 7.5 9.5 8.5 2.6 281 chr3L 6619225 intergenic CG8398 + chr3L 6619366 intergenic CG8398 + chr3L 6619506 intergenic CG8398 + chr3L_25_6615001 chr3L_6615001 RAL-849 2313 chr3L 6620563 6620598 chr3L 6621053 6621088 Rt1c 19 489 7.5 10.5 9.0 1.9 525 chr3L 6620563 intergenic not near genes chr3L 6620826 intergenic not near genes chr3L 6621088 intergenic not near genes chr3L_19_6620001 chr3L_6620001 RAL-849 2314 chr3L 6621686 6621750 chr3L 6621919 6621983 9 233 6.5 8.0 7.2 1.1 297 chr3L 6621686 intergenic not near genes chr3L 6621834 intergenic not near genes chr3L 6621983 intergenic not near genes chr3L_9_6620001 chr3L_6620001 RAL-849 2315 chr3L 6778493 6778534 chr3L 6778632 6778677 5 141 0.0 4.0 2.0 1.7 184 chr3L 6778493 intergenic not near genes chr3L 6778585 intergenic not near genes chr3L 6778677 intergenic not near genes chr3L_5_6775001 chr3L_6775001 RAL-849 2316 chr3L 6781078 6781139 chr3L 6783141 6783202 Doc 21 2063 6.0 8.5 7.2 2.6 2124 chr3L 6781078 intergenic not near genes chr3L 6782140 intergenic not near genes chr3L 6783202 intergenic not near genes chr3L_21_6780001 chr3L_6780001 RAL-849 2317 chr3L 6820594 6820626 chr3L 6820728 6820754 9 133 10.5 9.5 10.0 0.8 160 chr3L 6820594 intergenic not near genes chr3L 6820674 intergenic not near genes chr3L 6820754 intergenic not near genes chr3L_9_6820001 chr3L_6820001 RAL-849 2318 chr3L 6855889 6855948 chr3L 6860719 6860719 Doc 28 4831 9.5 9.0 9.2 2.7 4830 chr3L 6855889 intergenic not near genes chr3L 6858304 intergenic not near genes chr3L 6860719 intergenic not near genes chr3L_28_6855001 chr3L_6855001 RAL-849 2319 chr3L 6875202 6875217 chr3L 6875329 6875344 9 127 11.5 6.5 9.0 0.9 142 chr3L 6875202 intergenic not near genes chr3L 6875273 intergenic not near genes chr3L 6875344 intergenic not near genes chr3L_9_6875001 chr3L_6875001 RAL-849 2320 chr3L 6887477 6887548 chr3L 6895019 6895044 roo 20 7540 3.5 5.5 4.5 3.6 7567 chr3L 6887477 intergenic not near genes chr3L 6891260 intergenic not near genes chr3L 6895044 intergenic not near genes chr3L_20_6890001 chr3L_6890001 RAL-849 2321 chr3L 6934324 6934352 chr3L 6934485 6934513 13 161 8.5 3.5 6.0 1.9 189 chr3L 6934324 exon CG14820 + chr3L 6934418 intron CG14820 + chr3L 6934513 exon CG14820 + chr3L_13_6930001 chr3L_6930001 RAL-849 2322 chr3L 6942024 6942071 chr3L 6942173 6942220 21 149 9.5 8.5 9.0 2.1 196 chr3L 6942024 intergenic not near genes chr3L 6942122 intergenic not near genes chr3L 6942220 intergenic not near genes chr3L_21_6940001 chr3L_6940001 RAL-849 2323 chr3L 6981900 6981938 chr3L 6982104 6982142 14 204 1.0 10.5 5.8 2.1 242 chr3L 6981900 intergenic not near genes chr3L 6982021 intergenic not near genes chr3L 6982142 intergenic not near genes chr3L_14_6980001 chr3L_6980001 RAL-849 2324 chr3L 6989255 6989321 chr3L 6989383 6989449 18 128 6.0 5.5 5.8 2.6 194 chr3L 6989255 intergenic not near genes chr3L 6989352 intergenic not near genes chr3L 6989449 intergenic not near genes chr3L_18_6985001 chr3L_6985001 RAL-849 2325 chr3L 7000325 7000346 chr3L 7000522 7000538 9 196 10.0 0.0 5.0 1.5 213 chr3L 7000325 intron Mp + chr3L 7000432 intron Mp + chr3L 7000538 intron Mp + chr3L_9_7000001 chr3L_7000001 RAL-849 2326 chr3L 7033128 7033194 chr3L 7033257 7033316 13 128 10.0 7.0 8.5 1.4 188 chr3L 7033128 intron Mp + chr3L 7033222 intron Mp + chr3L 7033316 intron Mp + chr3L_13_7030001 chr3L_7030001 RAL-849 2327 chr3L 7041882 7041922 chr3L 7042005 7042049 11 126 6.5 5.5 6.0 1.6 167 chr3L 7041882 intron Mp + chr3L 7041966 intron Mp + chr3L 7042049 intron Mp + chr3L_11_7040001 chr3L_7040001 RAL-849 2328 chr3L 7100393 7100454 chr3L 7100530 7100591 25 137 8.5 11.5 10.0 2.3 198 chr3L 7100393 intron form3 + chr3L 7100492 intron form3 + chr3L 7100591 intron form3 + chr3L_25_7100001 chr3L_7100001 RAL-849 2329 chr3L 7150020 7150040 chr3L 7150149 7150169 10 129 0.0 16.5 8.2 1.1 149 chr3L 7150020 intron corn - chr3L 7150094 intron corn - chr3L 7150169 intron corn - chr3L_10_7150001 chr3L_7150001 RAL-849 2330 chr3L 7216071 7216080 chr3L 7216199 7216208 5 127 27.0 9.0 18.0 0.3 137 chr3L 7216071 intergenic not near genes chr3L 7216140 intergenic not near genes chr3L 7216208 intergenic not near genes chr3L_5_7215001 chr3L_7215001 RAL-849 2331 chr3L 7216095 7216142 chr3L 7216191 7216245 11 117 12.0 9.5 10.8 0.9 150 chr3L 7216095 intergenic not near genes chr3L 7216170 intergenic not near genes chr3L 7216245 intergenic not near genes chr3L_11_7215001 chr3L_7215001 RAL-849 2332 chr3L 7236580 7236621 chr3L 7236806 7236847 12 226 7.0 6.5 6.8 1.5 267 chr3L 7236580 intergenic CG14829 - chr3L 7236714 intergenic CG14829 - chr3L 7236847 3` UTR CG14829 - chr3L_12_7235001 chr3L_7235001 RAL-849 2333 chr3L 7285402 7285463 chr3L 7285530 7285588 18 126 2.5 3.5 3.0 4.5 186 chr3L 7285402 intron unc-13-4A - chr3L 7285495 intron unc-13-4A - chr3L 7285588 intron unc-13-4A - chr3L_18_7285001 chr3L_7285001 RAL-849 2334 chr3L 7377271 7377334 chr3L 7380426 7380489 297 23 3155 6.0 9.0 7.5 2.7 3218 chr3L 7377271 intron SMSr - chr3L 7378880 intron SMSr - chr3L 7380489 intron SMSr - chr3L_23_7375001 chr3L_7375001 RAL-849 2335 chr3L 7391570 7391608 chr3L 7391710 7391734 10 136 9.5 0.0 4.8 1.7 164 chr3L 7391570 intron CG8563 + chr3L 7391652 intron CG8563 + chr3L 7391734 intron CG8563 + chr3L_10_7390001 chr3L_7390001 RAL-849 2336 chr3L 7425970 7426028 chr3L 7426402 7426458 15 429 4.0 5.5 4.8 2.6 488 chr3L 7425970 intron CG42458 + chr3L 7426214 intron CG42458 + chr3L 7426458 intron CG42458 + chr3L_15_7425001 chr3L_7425001 RAL-849 2337 chr3L 7460331 7460400 chr3L 7460465 7460534 20 134 4.0 8.5 6.2 2.8 203 chr3L 7460331 intergenic not near genes chr3L 7460432 intergenic not near genes chr3L 7460534 intergenic not near genes chr3L_20_7460001 chr3L_7460001 RAL-849 2338 chr3L 7462910 7462991 chr3L 7463037 7463121 12 127 5.0 6.5 5.8 1.8 211 chr3L 7462910 intergenic not near genes chr3L 7463016 intergenic not near genes chr3L 7463121 intergenic not near genes chr3L_12_7460001 chr3L_7460001 RAL-849 2339 chr3L 7464809 7464877 chr3L 7464936 7465004 26 123 5.0 4.0 4.5 4.7 195 chr3L 7464809 intergenic not near genes chr3L 7464906 intergenic not near genes chr3L 7465004 intergenic not near genes chr3L_26_7460001 chr3L_7460001 RAL-849 2340 chr3L 7480003 7480069 chr3L 7480142 7480208 12 138 5.0 6.0 5.5 1.8 205 chr3L 7480003 intergenic not near genes chr3L 7480106 intergenic not near genes chr3L 7480208 intergenic not near genes chr3L_12_7480001 chr3L_7480001 RAL-849 2341 chr3L 7487898 7487935 chr3L 7488025 7488062 9 127 3.5 7.0 5.2 1.5 164 chr3L 7487898 3` UTR mthl6 + chr3L 7487980 intergenic mthl6 + chr3L 7488062 intergenic mthl6 + chr3L_9_7485001 chr3L_7485001 RAL-849 2342 chr3L 7498727 7498780 chr3L 7503554 7503607 F-element 15 4827 5.0 8.0 6.5 2.0 4880 chr3L 7498727 5` UTR CG8539 - chr3L 7501167 intergenic not near genes chr3L 7503607 intergenic not near genes chr3L_15_7500001 chr3L_7500001 RAL-849 2343 chr3L 7505382 7505440 chr3L 7505508 7505566 25 126 3.0 9.5 6.2 3.5 184 chr3L 7505382 intergenic CG7548 - chr3L 7505474 intergenic CG7548 - chr3L 7505566 3` UTR CG7548 - chr3L_25_7505001 chr3L_7505001 RAL-849 2344 chr3L 7561682 7561756 chr3L 7562353 7562427 20 671 30.5 26.5 28.5 0.7 745 chr3L 7561682 intergenic not near genes chr3L 7562054 intergenic not near genes chr3L 7562427 intergenic frac + chr3L_20_7560001 chr3L_7560001 RAL-849 2345 chr3L 7560979 7561043 chr3L 7563203 7563267 26 2224 37.0 40.0 38.5 0.7 2288 chr3L 7560979 intergenic not near genes chr3L 7562123 intergenic frac + chr3L 7563267 intron frac + chr3L_26_7560001 chr3L_7560001 RAL-849 2346 chr3L 7572011 7572085 chr3L 7572153 7572186 21 132 6.5 5.0 5.8 3.1 175 chr3L 7572011 intergenic not near genes chr3L 7572098 intergenic not near genes chr3L 7572186 intergenic not near genes chr3L_21_7570001 chr3L_7570001 RAL-849 2347 chr3L 7581583 7581653 chr3L 7581717 7581787 20 130 10.0 11.5 10.8 1.7 204 chr3L 7581583 intergenic not near genes chr3L 7581685 intergenic not near genes chr3L 7581787 intergenic not near genes chr3L_20_7580001 chr3L_7580001 RAL-849 2348 chr3L 7591113 7591181 chr3L 7591248 7591270 27 134 6.0 12.0 9.0 2.7 157 chr3L 7591113 intergenic CG7716 - chr3L 7591192 intergenic CG7716 - chr3L 7591270 intergenic CG7716 - chr3L_27_7590001 chr3L_7590001 RAL-849 2349 chr3L 7617650 7617692 chr3L 7617809 7617851 8 158 8.5 0.0 4.2 1.5 201 chr3L 7617650 intron CG33275 + chr3L 7617750 intron CG33275 + chr3L 7617851 intron CG33275 + chr3L_8_7615001 chr3L_7615001 RAL-849 2350 chr3L 7767517 7767549 chr3L 7767698 7767730 11 181 16.0 11.5 13.8 0.7 213 chr3L 7767517 intron,exon Clk -,CG32371 - chr3L 7767624 intron,exon Clk -,CG32371 - chr3L 7767730 intron,exon Clk -,CG32371 - chr3L_11_7765001 chr3L_7765001 RAL-849 2351 chr3L 7793671 7793734 chr3L 7800773 7800836 297 28 7102 11.0 7.0 9.0 2.8 7165 chr3L 7793671 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800836 intron CG32369 - chr3L_28_7795001 chr3L_7795001 RAL-849 2352 chr3L 7843112 7843188 chr3L 7843254 7843331 16 142 1.5 7.5 4.5 2.9 219 chr3L 7843112 intron Pdp1 - chr3L 7843222 intron Pdp1 - chr3L 7843331 intron Pdp1 - chr3L_16_7840001 chr3L_7840001 RAL-849 2353 chr3L 7845340 7845417 chr3L 7845473 7845549 22 132 2.5 4.0 3.2 5.2 209 chr3L 7845340 intron Pdp1 - chr3L 7845444 intron Pdp1 - chr3L 7845549 intron Pdp1 - chr3L_22_7845001 chr3L_7845001 RAL-849 2354 chr3L 7869622 7869653 chr3L 7869749 7869759 6 123 16.5 8.0 12.2 0.5 137 chr3L 7869622 exon CG32365 + chr3L 7869690 exon CG32365 + chr3L 7869759 exon CG32365 + chr3L_6_7865001 chr3L_7865001 RAL-849 2355 chr3L 7886470 7886541 chr3L 7889038 7889108 Stalker4 20 2566 4.0 8.5 6.2 2.8 2638 chr3L 7886470 intron CG32365 + chr3L 7887789 intron CG32365 + chr3L 7889108 intron CG32365 + chr3L_20_7885001 chr3L_7885001 RAL-849 2356 chr3L 7916786 7916851 chr3L 7926007 7926072 roo 13 9221 6.5 7.0 6.8 1.7 9286 chr3L 7916786 3` UTR syd - chr3L 7921429 intron syd - chr3L 7926072 3` UTR syd - chr3L_13_7920001 chr3L_7920001 RAL-849 2357 chr3L 7983126 7983192 chr3L 7983258 7983324 8 132 4.5 0.0 2.2 2.5 198 chr3L 7983126 intron nmo + chr3L 7983225 intron nmo + chr3L 7983324 intron nmo + chr3L_8_7980001 chr3L_7980001 RAL-849 2358 chr3L 7985322 7985387 chr3L 7987700 7987765 NOF 18 2377 8.0 4.0 6.0 2.6 2443 chr3L 7985322 intron nmo + chr3L 7986544 intron nmo + chr3L 7987765 intron nmo + chr3L_18_7985001 chr3L_7985001 RAL-849 2359 chr3L 8019653 8019731 chr3L 8024117 8024193 NOF 17 4460 3.0 4.0 3.5 3.8 4540 chr3L 8019653 intron nmo + chr3L 8021923 intron nmo + chr3L 8024193 intron nmo + chr3L_17_8020001 chr3L_8020001 RAL-849 2360 chr3L 8062801 8062852 chr3L 8062928 8062979 11 125 6.0 14.5 10.2 1.0 178 chr3L 8062801 intergenic not near genes chr3L 8062890 intergenic not near genes chr3L 8062979 intergenic not near genes chr3L_11_8060001 chr3L_8060001 RAL-849 2361 chr3L 8075320 8075377 chr3L 8075456 8075513 26 136 8.5 9.0 8.8 2.7 193 chr3L 8075320 intron Ect4 + chr3L 8075416 intron Ect4 + chr3L 8075513 intron Ect4 + chr3L_26_8075001 chr3L_8075001 RAL-849 2362 chr3L 8178469 8178474 chr3L 8178596 8178601 4 127 12.5 0.0 6.2 0.6 132 chr3L 8178469 intergenic Nmt -,mthl7 - chr3L 8178535 intergenic Nmt -,mthl7 - chr3L 8178601 intergenic mthl7 -,Nmt - chr3L_4_8175001 chr3L_8175001 RAL-849 2363 chr3L 8220270 8220308 chr3L 8220415 8220454 4 145 0.0 4.5 2.2 1.2 184 chr3L 8220270 intergenic not near genes chr3L 8220362 intergenic not near genes chr3L 8220454 intergenic not near genes chr3L_4_8220001 chr3L_8220001 RAL-849 2364 chr3L 8233553 8233580 chr3L 8238853 8238890 Rt1a 8 5307 10.5 15.0 12.8 0.6 5337 chr3L 8233553 intron CG7213 - chr3L 8236222 intron CG7213 - chr3L 8238890 intron,intron CG7213 -,Dscam4 + chr3L_8_8235001 chr3L_8235001 RAL-849 2365 chr3L 8364482 8364525 chr3L 8364623 8364666 14 141 11.0 4.0 7.5 1.6 184 chr3L 8364482 intergenic not near genes chr3L 8364574 intergenic not near genes chr3L 8364666 intergenic not near genes chr3L_14_8360001 chr3L_8360001 RAL-849 2366 chr3L 8369873 8369915 chr3L 8370000 8370042 14 123 15.5 13.5 14.5 0.9 169 chr3L 8369873 intergenic not near genes chr3L 8369958 intergenic not near genes chr3L 8370042 intergenic not near genes chr3L_14_8365001 chr3L_8365001 RAL-849 2367 chr3L 8434638 8434655 chr3L 8434797 8434814 6 157 25.0 26.5 25.8 0.2 176 chr3L 8434638 exon Unr - chr3L 8434726 exon Unr - chr3L 8434814 exon Unr - chr3L_6_8430001 chr3L_8430001 RAL-849 2368 chr3L 8434656 8434710 chr3L 8434789 8434819 19 150 15.0 25.0 20.0 0.9 163 chr3L 8434656 exon Unr - chr3L 8434738 intron Unr - chr3L 8434819 exon Unr - chr3L_19_8430001 chr3L_8430001 RAL-849 2369 chr3L 8445091 8445168 chr3L 8445305 8445382 23 214 3.5 4.0 3.8 4.8 291 chr3L 8445091 intron CG6983 - chr3L 8445236 intron CG6983 - chr3L 8445382 intron CG6983 - chr3L_23_8445001 chr3L_8445001 RAL-849 2370 chr3L 8481741 8481773 chr3L 8490950 8490968 roo 7 9201 18.0 8.5 13.2 0.5 9227 chr3L 8481741 intron CG43163 - chr3L 8486354 intron CG43163 - chr3L 8490968 intron CG43163 - chr3L_7_8485001 chr3L_8485001 RAL-849 2371 chr3L 8481783 8481798 chr3L 8490941 8490991 roo 11 9174 12.0 5.5 8.8 1.1 9208 chr3L 8481783 intron CG43163 - chr3L 8486387 intron CG43163 - chr3L 8490991 intron CG43163 - chr3L_11_8485001 chr3L_8485001 RAL-849 2372 chr3L 8498257 8498268 chr3L 8505774 8505785 blood 5 7517 12.5 5.5 9.0 0.5 7528 chr3L 8498257 intron CG43163 - chr3L 8502021 intron CG43163 - chr3L 8505785 intron CG43163 - chr3L_5_8500001 chr3L_8500001 RAL-849 2373 chr3L 8498270 8498324 chr3L 8505771 8505841 blood 13 7516 7.0 4.5 5.8 1.9 7571 chr3L 8498270 intron CG43163 - chr3L 8502056 intron CG43163 - chr3L 8505841 intron CG43163 - chr3L_13_8500001 chr3L_8500001 RAL-849 2374 chr3L 8525840 8525881 chr3L 8525990 8526037 24 155 13.0 8.0 10.5 2.1 197 chr3L 8525840 intron foi + chr3L 8525938 intron foi + chr3L 8526037 intron foi + chr3L_24_8525001 chr3L_8525001 RAL-849 2375 chr3L 8525883 8525907 chr3L 8525988 8526063 12 152 6.0 8.0 7.0 1.5 180 chr3L 8525883 intron foi + chr3L 8525973 intron foi + chr3L 8526063 intron foi + chr3L_12_8525001 chr3L_8525001 RAL-849 2376 chr3L 8579784 8579860 chr3L 8579916 8579992 42 125 8.5 5.5 7.0 5.2 208 chr3L 8579784 intron CG43078 + chr3L 8579888 intron CG43078 + chr3L 8579992 intron CG43078 + chr3L_42_8575001 chr3L_8575001 RAL-849 2377 chr3L 8614981 8615059 chr3L 8615110 8615188 22 129 3.0 5.0 4.0 4.4 207 chr3L 8614981 exon CG6282 + chr3L 8615084 intron CG6282 + chr3L 8615188 intron CG6282 + chr3L_22_8615001 chr3L_8615001 RAL-849 2378 chr3L 8697241 8697289 chr3L 8697371 8697419 21 130 11.5 6.0 8.8 2.1 178 chr3L 8697241 intergenic not near genes chr3L 8697330 intergenic not near genes chr3L 8697419 intergenic not near genes chr3L_21_8695001 chr3L_8695001 RAL-849 2379 chr3L 8736539 8736615 chr3L 8736791 8736867 78 251 21.5 22.5 22.0 3.4 328 chr3L 8736539 intron Prm - chr3L 8736703 intron Prm - chr3L 8736867 intron Prm - chr3L_78_8735001 chr3L_8735001 RAL-849 2380 chr3L 8738197 8738258 chr3L 8738352 8738413 33 155 20.0 0.0 10.0 3.0 216 chr3L 8738197 intron Prm - chr3L 8738305 intron Prm - chr3L 8738413 intron Prm - chr3L_33_8735001 chr3L_8735001 RAL-849 2381 chr3L 8772008 8772082 chr3L 8772136 8772210 27 128 14.5 9.5 12.0 2.1 202 chr3L 8772008 intron Fhos + chr3L 8772109 intron Fhos + chr3L 8772210 intron Fhos + chr3L_27_8770001 chr3L_8770001 RAL-849 2382 chr3L 8791228 8791306 chr3L 8796698 8796775 I-element 23 5469 7.5 0.0 3.8 4.8 5547 chr3L 8791228 exon Fhos + chr3L 8794002 intron Fhos + chr3L 8796775 intron Fhos + chr3L_23_8790001 chr3L_8790001 RAL-849 2383 chr3L 8826989 8827017 chr3L 8827153 8827180 5 164 4.5 4.5 4.5 0.9 191 chr3L 8826989 intergenic not near genes chr3L 8827084 intergenic dally + chr3L 8827180 intergenic dally + chr3L_5_8825001 chr3L_8825001 RAL-849 2384 chr3L 8839722 8839751 chr3L 8839852 8839881 10 130 4.5 9.5 7.0 1.2 159 chr3L 8839722 intron dally + chr3L 8839802 intron dally + chr3L 8839881 intron dally + chr3L_10_8835001 chr3L_8835001 RAL-849 2385 chr3L 8864074 8864109 chr3L 8864225 8864240 10 146 11.0 15.0 13.0 0.7 166 chr3L 8864074 intron dally + chr3L 8864157 intron dally + chr3L 8864240 intron dally + chr3L_10_8860001 chr3L_8860001 RAL-849 2386 chr3L 8951962 8952031 chr3L 8952098 8952166 12 136 5.0 5.5 5.2 1.9 204 chr3L 8951962 intron,intron CG43783 -,orb2 - chr3L 8952064 intron,intron CG43783 -,orb2 - chr3L 8952166 intron,intron CG43783 -,orb2 - chr3L_12_8950001 chr3L_8950001 RAL-849 2387 chr3L 8959348 8959361 chr3L 8959559 8959572 11 211 9.5 4.5 7.0 1.4 224 chr3L 8959348 intron CG13313 + chr3L 8959460 intron CG13313 + chr3L 8959572 intron CG13313 + chr3L_11_8955001 chr3L_8955001 RAL-849 2388 chr3L 9013689 9013692 chr3L 18417066 18417066 5 9403375 43.0 28.5 35.8 0.1 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-849 2389 chr3L 9030380 9030437 chr3L 9030509 9030566 12 129 8.5 5.0 6.8 1.5 186 chr3L 9030380 intergenic not near genes chr3L 9030473 intergenic not near genes chr3L 9030566 intergenic not near genes chr3L_12_9030001 chr3L_9030001 RAL-849 2390 chr3L 9047045 9047111 chr3L 9047182 9047248 10 137 0.5 5.0 2.8 2.6 203 chr3L 9047045 intergenic CG5144 + chr3L 9047146 intergenic CG5144 + chr3L 9047248 intergenic CG5144 + chr3L_10_9045001 chr3L_9045001 RAL-849 2391 chr3L 9076885 9076949 chr3L 9084495 9084559 412 25 7609 11.5 11.0 11.2 2.0 7674 chr3L 9076885 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084559 exon Tequila + chr3L_25_9080001 chr3L_9080001 RAL-849 2392 chr3L 9111123 9111167 chr3L 9111249 9111293 10 124 6.0 10.0 8.0 1.1 170 chr3L 9111123 intron bol - chr3L 9111208 intron bol - chr3L 9111293 intron bol - chr3L_10_9110001 chr3L_9110001 RAL-849 2393 chr3L 9123158 9123170 chr3L 9123285 9123297 4 127 4.0 5.5 4.8 0.7 139 chr3L 9123158 intron bol - chr3L 9123228 intron bol - chr3L 9123297 intron bol - chr3L_4_9120001 chr3L_9120001 RAL-849 2394 chr3L 9130535 9130578 chr3L 9134335 9134389 412 17 3808 9.0 15.0 12.0 1.3 3854 chr3L 9130535 intergenic bol - chr3L 9132462 intergenic not near genes chr3L 9134389 intergenic Dhpr + chr3L_17_9130001 chr3L_9130001 RAL-849 2395 chr3L 9143338 9143388 chr3L 9143507 9143554 4 168 0.0 3.0 1.5 1.6 216 chr3L 9143338 intron nwk + chr3L 9143446 intron nwk + chr3L 9143554 exon nwk + chr3L_4_9140001 chr3L_9140001 RAL-849 2396 chr3L 9164655 9164684 chr3L 9166172 9166201 hobo 14 1516 15.5 0.0 7.8 1.6 1546 chr3L 9164655 intron Rdl - chr3L 9165428 intron Rdl - chr3L 9166201 intron Rdl - chr3L_14_9165001 chr3L_9165001 RAL-849 2397 chr3L 9219204 9219214 chr3L 9219926 9219936 jockey 6 722 24.5 10.5 17.5 0.3 732 chr3L 9219204 intergenic not near genes chr3L 9219570 intergenic not near genes chr3L 9219936 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-849 2398 chr3L 9219215 9219264 chr3L 9219921 9219951 jockey 33 719 11.0 9.5 10.2 2.9 736 chr3L 9219215 intergenic not near genes chr3L 9219583 intergenic not near genes chr3L 9219951 intergenic not near genes chr3L_33_9215001 chr3L_9215001 RAL-849 2399 chr3L 9253253 9253284 chr3L 9253742 9253756 6 483 11.5 8.0 9.8 0.6 503 chr3L 9253253 intron GluRIB + chr3L 9253504 intron GluRIB + chr3L 9253756 intron GluRIB + chr3L_6_9250001 chr3L_9250001 RAL-849 2400 chr3L 9253285 9253305 chr3L 9253728 9253777 6 471 8.5 6.5 7.5 0.7 492 chr3L 9253285 intron GluRIB + chr3L 9253531 intron GluRIB + chr3L 9253777 intron GluRIB + chr3L_6_9250001 chr3L_9250001 RAL-849 2401 chr3L 9270575 9270648 chr3L 9278380 9278402 roo 12 7791 7.0 14.0 10.5 1.0 7827 chr3L 9270575 intron GluRIB + chr3L 9274488 intron GluRIB + chr3L 9278402 exon GluRIB + chr3L_12_9270001 chr3L_9270001 RAL-849 2402 chr3L 9307796 9307796 chr3L 22908066 22908066 4 13600270 34.5 39.5 37.0 0.1 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-849 2403 chr3L 9313982 9314001 chr3L 9314123 9314142 11 141 6.5 5.0 5.8 1.6 160 chr3L 9313982 intergenic not near genes chr3L 9314062 intergenic not near genes chr3L 9314142 intergenic not near genes chr3L_11_9310001 chr3L_9310001 RAL-849 2404 chr3L 9392440 9392503 chr3L 9395291 9395369 Doc 5 2866 5.5 6.5 6.0 0.7 2929 chr3L 9392440 intron CG4080 - chr3L 9393904 intron CG4080 - chr3L 9395369 intron CG4080 - chr3L_5_9390001 chr3L_9390001 RAL-849 2405 chr3L 9443527 9443540 chr3L 9445353 9445366 S-element 5 1826 0.0 8.0 4.0 1.0 1839 chr3L 9443527 intron CG33926 + chr3L 9444446 intron CG33926 + chr3L 9445366 intron CG33926 + chr3L_5_9440001 chr3L_9440001 RAL-849 2406 chr3L 9498161 9498215 chr3L 9498288 9498342 17 127 8.0 4.0 6.0 2.4 181 chr3L 9498161 intron path - chr3L 9498252 intron path - chr3L 9498342 intron path - chr3L_17_9495001 chr3L_9495001 RAL-849 2407 chr3L 9501661 9501726 chr3L 9502197 9502262 roo 26 536 7.5 10.5 9.0 2.6 601 chr3L 9501661 intron path - chr3L 9501962 intron path - chr3L 9502262 intron path - chr3L_26_9500001 chr3L_9500001 RAL-849 2408 chr3L 9503413 9503461 chr3L 9503552 9503600 9 139 9.0 9.0 9.0 0.9 187 chr3L 9503413 intron path - chr3L 9503506 intron path - chr3L 9503600 intron path - chr3L_9_9500001 chr3L_9500001 RAL-849 2409 chr3L 9506672 9506692 chr3L 9506806 9506826 5 134 5.0 11.5 8.2 0.5 154 chr3L 9506672 intergenic CG3408 - chr3L 9506749 intergenic CG3408 - chr3L 9506826 3` UTR CG3408 - chr3L_5_9505001 chr3L_9505001 RAL-849 2410 chr3L 9513409 9513466 chr3L 9513546 9513603 26 137 6.5 7.0 6.8 3.3 194 chr3L 9513409 5` UTR CG33702 - chr3L 9513506 intergenic CG33702 - chr3L 9513603 intergenic CG33702 - chr3L_26_9510001 chr3L_9510001 RAL-849 2411 chr3L 9533717 9533786 chr3L 9541327 9541346 412 22 7598 5.0 12.0 8.5 2.3 7629 chr3L 9533717 intergenic not near genes chr3L 9537532 intergenic not near genes chr3L 9541346 intergenic not near genes chr3L_22_9535001 chr3L_9535001 RAL-849 2412 chr3L 9546656 9546673 chr3L 9546816 9546833 8 160 0.0 13.0 6.5 1.1 177 chr3L 9546656 intergenic not near genes chr3L 9546744 intergenic CG42673 + chr3L 9546833 intergenic CG42673 + chr3L_8_9545001 chr3L_9545001 RAL-849 2413 chr3L 9571876 9571931 chr3L 9572274 9572329 jockey 18 398 5.5 7.0 6.2 2.5 453 chr3L 9571876 intron CG42673 + chr3L 9572102 intron CG42673 + chr3L 9572329 intron CG42673 + chr3L_18_9570001 chr3L_9570001 RAL-849 2414 chr3L 9575871 9575933 chr3L 9580999 9581062 jockey 15 5128 9.5 7.5 8.5 1.6 5191 chr3L 9575871 intron CG42673 + chr3L 9578466 intron CG42673 + chr3L 9581062 intron CG42673 + chr3L_15_9575001 chr3L_9575001 RAL-849 2415 chr3L 9589303 9589376 chr3L 9589507 9589580 40 204 6.5 6.0 6.2 5.6 277 chr3L 9589303 intron CG42673 + chr3L 9589442 intron CG42673 + chr3L 9589580 intron CG42673 + chr3L_40_9585001 chr3L_9585001 RAL-849 2416 chr3L 9596629 9596705 chr3L 9596756 9596816 32 122 11.0 8.0 9.5 3.0 187 chr3L 9596629 3` UTR CG42673 + chr3L 9596722 intergenic CG42673 + chr3L 9596816 intergenic CG42673 + chr3L_32_9595001 chr3L_9595001 RAL-849 2417 chr3L 9613850 9613893 chr3L 9613987 9614030 14 137 3.5 0.0 1.8 5.0 180 chr3L 9613850 3` UTR CG3280 + chr3L 9613940 intergenic CG3280 + chr3L 9614030 intergenic CG3280 + chr3L_14_9610001 chr3L_9610001 RAL-849 2418 chr3L 9635528 9635605 chr3L 9635655 9635732 27 127 4.0 6.0 5.0 4.5 204 chr3L 9635528 intron fry - chr3L 9635630 intron fry - chr3L 9635732 exon fry - chr3L_27_9635001 chr3L_9635001 RAL-849 2419 chr3L 9800529 9800538 chr3L 9800657 9800665 5 128 0.0 11.5 5.8 0.7 136 chr3L 9800529 intron CG32052 + chr3L 9800597 intron CG32052 + chr3L 9800665 intron CG32052 + chr3L_5_9800001 chr3L_9800001 RAL-849 2420 chr3L 9809686 9809707 chr3L 9809813 9809834 7 125 22.0 15.5 18.8 0.4 148 chr3L 9809686 intergenic not near genes chr3L 9809760 intergenic not near genes chr3L 9809834 intergenic not near genes chr3L_7_9805001 chr3L_9805001 RAL-849 2421 chr3L 9809708 9809745 chr3L 9809812 9809850 17 120 13.0 16.0 14.5 1.1 142 chr3L 9809708 intergenic not near genes chr3L 9809779 intergenic not near genes chr3L 9809850 intergenic not near genes chr3L_17_9805001 chr3L_9805001 RAL-849 2422 chr3L 9915279 9915312 chr3L 9915408 9915441 9 129 13.0 10.0 11.5 0.7 162 chr3L 9915279 intron CG34356 + chr3L 9915360 intron CG34356 + chr3L 9915441 intron CG34356 + chr3L_9_9915001 chr3L_9915001 RAL-849 2423 chr3L 9918842 9918910 chr3L 9918977 9919055 31 144 8.5 6.0 7.2 3.8 213 chr3L 9918842 intron CG34356 + chr3L 9918948 intron CG34356 + chr3L 9919055 intron CG34356 + chr3L_31_9915001 chr3L_9915001 RAL-849 2424 chr3L 9929633 9929691 chr3L 9938463 9938521 roo 20 8827 6.0 6.0 6.0 2.9 8888 chr3L 9929633 intron CG34356 + chr3L 9934077 intron CG34356 + chr3L 9938521 intron CG34356 + chr3L_20_9930001 chr3L_9930001 RAL-849 2425 chr3L 10003104 10003155 chr3L 10003251 10003302 15 147 9.5 6.0 7.8 1.7 198 chr3L 10003104 intron dpr6 + chr3L 10003203 intron dpr6 + chr3L 10003302 intron dpr6 + chr3L_15_10000001 chr3L_10000001 RAL-849 2426 chr3L 10004039 10004112 chr3L 10004169 10004242 14 128 2.5 4.5 3.5 3.1 203 chr3L 10004039 exon dpr6 + chr3L 10004140 intron dpr6 + chr3L 10004242 intron dpr6 + chr3L_14_10000001 chr3L_10000001 RAL-849 2427 chr3L 10007141 10007206 chr3L 10007293 10007359 32 152 3.5 3.5 3.5 7.1 218 chr3L 10007141 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007359 intron dpr6 + chr3L_32_10005001 chr3L_10005001 RAL-849 2428 chr3L 10032669 10032723 chr3L 10032808 10032862 12 136 4.0 6.0 5.0 2.0 193 chr3L 10032669 intron dpr6 + chr3L 10032766 intron dpr6 + chr3L 10032862 intron dpr6 + chr3L_12_10030001 chr3L_10030001 RAL-849 2429 chr3L 10075718 10075792 chr3L 10075864 10075877 33 142 8.0 7.5 7.8 3.7 159 chr3L 10075718 intron dpr6 + chr3L 10075798 intron dpr6 + chr3L 10075877 intron dpr6 + chr3L_33_10075001 chr3L_10075001 RAL-849 2430 chr3L 10099104 10099179 chr3L 10099271 10099342 22 164 3.0 9.5 6.2 3.1 238 chr3L 10099104 intron dpr6 + chr3L 10099223 intron dpr6 + chr3L 10099342 intron dpr6 + chr3L_22_10095001 chr3L_10095001 RAL-849 2431 chr3L 10138630 10138634 chr3L 10138758 10138762 5 128 16.0 1.0 8.5 0.5 132 chr3L 10138630 intron dpr6 + chr3L 10138696 intron dpr6 + chr3L 10138762 intron dpr6 + chr3L_5_10135001 chr3L_10135001 RAL-849 2432 chr3L 10161427 10161451 chr3L 10161556 10161580 10 126 1.0 14.5 7.8 1.1 153 chr3L 10161427 intron dpr10 - chr3L 10161504 intron dpr10 - chr3L 10161580 intron dpr10 - chr3L_10_10160001 chr3L_10160001 RAL-849 2433 chr3L 10161454 10161459 chr3L 10161511 10161553 4 102 2.5 6.0 4.2 0.8 99 chr3L 10161454 intron dpr10 - chr3L 10161504 intron dpr10 - chr3L 10161553 intron dpr10 - chr3L_4_10160001 chr3L_10160001 RAL-849 2434 chr3L 10204035 10204081 chr3L 10204225 10204260 15 189 7.0 3.5 5.2 2.4 225 chr3L 10204035 intergenic not near genes chr3L 10204148 intergenic not near genes chr3L 10204260 intergenic not near genes chr3L_15_10200001 chr3L_10200001 RAL-849 2435 chr3L 10214769 10214829 chr3L 10214921 10214981 19 152 3.0 6.0 4.5 3.5 212 chr3L 10214769 intergenic not near genes chr3L 10214875 intergenic not near genes chr3L 10214981 intergenic not near genes chr3L_19_10210001 chr3L_10210001 RAL-849 2436 chr3L 10222690 10222772 chr3L 10222820 10222902 18 130 1.5 7.5 4.5 3.3 212 chr3L 10222690 intron scramb1 - chr3L 10222796 intron scramb1 - chr3L 10222902 intron scramb1 - chr3L_18_10220001 chr3L_10220001 RAL-849 2437 chr3L 10246025 10246068 chr3L 10246178 10246221 5 153 0.0 7.5 3.8 1.0 196 chr3L 10246025 intergenic not near genes chr3L 10246123 intergenic not near genes chr3L 10246221 intergenic not near genes chr3L_5_10245001 chr3L_10245001 RAL-849 2438 chr3L 10308702 10308762 chr3L 10308829 10308889 26 125 1.5 6.5 4.0 5.2 187 chr3L 10308702 intergenic not near genes chr3L 10308796 intergenic not near genes chr3L 10308889 intergenic not near genes chr3L_26_10305001 chr3L_10305001 RAL-849 2439 chr3L 10310301 10310379 chr3L 10310448 10310526 24 145 4.0 5.5 4.8 4.1 225 chr3L 10310301 intergenic not near genes chr3L 10310414 intergenic not near genes chr3L 10310526 intergenic not near genes chr3L_24_10310001 chr3L_10310001 RAL-849 2440 chr3L 10314088 10314150 chr3L 10314224 10314286 27 136 7.5 8.5 8.0 3.0 198 chr3L 10314088 intergenic not near genes chr3L 10314187 intergenic not near genes chr3L 10314286 intergenic not near genes chr3L_27_10310001 chr3L_10310001 RAL-849 2441 chr3L 10314433 10314503 chr3L 10314563 10314633 23 130 7.0 5.0 6.0 3.3 200 chr3L 10314433 intergenic not near genes chr3L 10314533 intergenic not near genes chr3L 10314633 intergenic not near genes chr3L_23_10310001 chr3L_10310001 RAL-849 2442 chr3L 10328066 10328129 chr3L 10328228 10328291 24 162 6.5 8.0 7.2 2.9 225 chr3L 10328066 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328291 intergenic not near genes chr3L_24_10325001 chr3L_10325001 RAL-849 2443 chr3L 10376081 10376137 chr3L 10376207 10376263 12 126 7.0 7.5 7.2 1.5 182 chr3L 10376081 intergenic not near genes chr3L 10376172 intergenic not near genes chr3L 10376263 intergenic not near genes chr3L_12_10375001 chr3L_10375001 RAL-849 2444 chr3L 10414892 10414968 chr3L 10417312 10417384 Doc 14 2420 5.5 8.0 6.8 1.8 2492 chr3L 10414892 intergenic CG12362 + chr3L 10416138 intergenic not near genes chr3L 10417384 intergenic not near genes chr3L_14_10415001 chr3L_10415001 RAL-849 2445 chr3L 10417531 10417588 chr3L 10417658 10417694 14 122 14.5 14.5 14.5 0.9 163 chr3L 10417531 intergenic not near genes chr3L 10417612 intergenic not near genes chr3L 10417694 intergenic not near genes chr3L_14_10415001 chr3L_10415001 RAL-849 2446 chr3L 10532700 10532770 chr3L 10532829 10532879 20 128 7.5 4.5 6.0 2.9 179 chr3L 10532700 intron A2bp1 + chr3L 10532790 intron A2bp1 + chr3L 10532879 intron A2bp1 + chr3L_20_10530001 chr3L_10530001 RAL-849 2447 chr3L 10553449 10553521 chr3L 10553696 10553767 23 245 9.0 3.0 6.0 3.3 318 chr3L 10553449 intron A2bp1 + chr3L 10553608 intron A2bp1 + chr3L 10553767 intron A2bp1 + chr3L_23_10550001 chr3L_10550001 RAL-849 2448 chr3L 10556204 10556274 chr3L 10556440 10556510 26 236 3.0 5.5 4.2 5.0 306 chr3L 10556204 intron A2bp1 + chr3L 10556357 intron A2bp1 + chr3L 10556510 intron A2bp1 + chr3L_26_10555001 chr3L_10555001 RAL-849 2449 chr3L 10600406 10600477 chr3L 10600538 10600609 12 131 8.0 6.0 7.0 1.5 203 chr3L 10600406 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600609 intergenic not near genes chr3L_12_10600001 chr3L_10600001 RAL-849 2450 chr3L 10613147 10613202 chr3L 10613492 10613546 19 344 5.5 7.5 6.5 2.5 399 chr3L 10613147 intergenic not near genes chr3L 10613346 intergenic not near genes chr3L 10613546 intergenic not near genes chr3L_19_10610001 chr3L_10610001 RAL-849 2451 chr3L 10621827 10621876 chr3L 10621964 10622013 13 137 3.0 9.0 6.0 1.9 186 chr3L 10621827 intergenic not near genes chr3L 10621920 intergenic not near genes chr3L 10622013 intergenic not near genes chr3L_13_10620001 chr3L_10620001 RAL-849 2452 chr3L 10658068 10658209 chr3L 10658195 10658371 22 164 0.0 0.0 0.0 22.0 303 chr3L 10658068 intron CG32066 - chr3L 10658220 intron CG32066 - chr3L 10658371 intron CG32066 - chr3L_22_10655001 chr3L_10655001 RAL-849 2453 chr3L 10694871 10694920 chr3L 10695013 10695037 14 140 0.0 4.5 2.2 4.4 166 chr3L 10694871 intron NijA - chr3L 10694954 intron NijA - chr3L 10695037 exon NijA - chr3L_14_10690001 chr3L_10690001 RAL-849 2454 chr3L 10706548 10706559 chr3L 10706730 10706741 4 182 0.0 5.5 2.8 1.1 193 chr3L 10706548 intergenic not near genes chr3L 10706644 intergenic not near genes chr3L 10706741 intergenic not near genes chr3L_4_10705001 chr3L_10705001 RAL-849 2455 chr3L 10717511 10717536 chr3L 10717840 10717865 10 329 3.5 14.5 9.0 1.0 354 chr3L 10717511 intergenic not near genes chr3L 10717688 intergenic not near genes chr3L 10717865 intergenic not near genes chr3L_10_10715001 chr3L_10715001 RAL-849 2456 chr3L 10735786 10735825 chr3L 10735925 10735964 9 139 5.5 13.0 9.2 0.9 178 chr3L 10735786 intergenic not near genes chr3L 10735875 intergenic not near genes chr3L 10735964 intergenic not near genes chr3L_9_10735001 chr3L_10735001 RAL-849 2457 chr3L 10739765 10739775 chr3L 10739899 10739909 6 134 6.5 0.0 3.2 1.4 144 chr3L 10739765 intergenic not near genes chr3L 10739837 intergenic not near genes chr3L 10739909 intergenic not near genes chr3L_6_10735001 chr3L_10735001 RAL-849 2458 chr3L 10745499 10745560 chr3L 10745629 10745679 21 129 7.0 7.5 7.2 2.6 180 chr3L 10745499 intergenic not near genes chr3L 10745589 intergenic not near genes chr3L 10745679 intergenic not near genes chr3L_21_10745001 chr3L_10745001 RAL-849 2459 chr3L 10820459 10820512 chr3L 10820661 10820714 9 201 6.0 0.0 3.0 2.2 255 chr3L 10820459 intergenic not near genes chr3L 10820586 intergenic not near genes chr3L 10820714 intergenic not near genes chr3L_9_10820001 chr3L_10820001 RAL-849 2460 chr3L 10907958 10907964 chr3L 10908084 10908090 4 126 8.0 0.0 4.0 0.8 132 chr3L 10907958 intergenic not near genes chr3L 10908024 intergenic not near genes chr3L 10908090 intergenic not near genes chr3L_4_10905001 chr3L_10905001 RAL-849 2461 chr3L 10940041 10940051 chr3L 10940152 10940170 4 121 19.5 5.5 12.5 0.3 129 chr3L 10940041 intergenic not near genes chr3L 10940106 intergenic not near genes chr3L 10940170 intergenic not near genes chr3L_4_10940001 chr3L_10940001 RAL-849 2462 chr3L 10940052 10940081 chr3L 10940144 10940157 10 96 7.0 6.5 6.8 1.3 105 chr3L 10940052 intergenic not near genes chr3L 10940104 intergenic not near genes chr3L 10940157 intergenic not near genes chr3L_10_10940001 chr3L_10940001 RAL-849 2463 chr3L 10942021 10942068 chr3L 10942149 10942201 9 127 15.5 8.5 12.0 0.7 180 chr3L 10942021 intergenic not near genes chr3L 10942111 intergenic not near genes chr3L 10942201 intergenic not near genes chr3L_9_10940001 chr3L_10940001 RAL-849 2464 chr3L 10947463 10947478 chr3L 10947589 10947604 5 126 0.0 3.0 1.5 2.0 141 chr3L 10947463 intergenic not near genes chr3L 10947534 intergenic not near genes chr3L 10947604 intergenic not near genes chr3L_5_10945001 chr3L_10945001 RAL-849 2465 chr3L 10956402 10956467 chr3L 10956570 10956635 15 167 7.5 5.0 6.2 2.1 233 chr3L 10956402 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956635 intergenic not near genes chr3L_15_10955001 chr3L_10955001 RAL-849 2466 chr3L 10958165 10958229 chr3L 10958297 10958349 7 126 6.0 0.0 3.0 1.8 184 chr3L 10958165 intergenic not near genes chr3L 10958257 intergenic not near genes chr3L 10958349 intergenic not near genes chr3L_7_10955001 chr3L_10955001 RAL-849 2467 chr3L 11018517 11018542 chr3L 11018650 11018675 8 133 9.5 8.0 8.8 0.8 158 chr3L 11018517 intergenic not near genes chr3L 11018596 intergenic not near genes chr3L 11018675 intergenic not near genes chr3L_8_11015001 chr3L_11015001 RAL-849 2468 chr3L 11052861 11052935 chr3L 11053005 11053073 30 140 4.5 8.5 6.5 4.0 212 chr3L 11052861 intergenic not near genes chr3L 11052967 intergenic not near genes chr3L 11053073 intergenic not near genes chr3L_30_11050001 chr3L_11050001 RAL-849 2469 chr3L 11087008 11087087 chr3L 11088846 11088926 S-element 18 1837 5.0 5.5 5.2 2.9 1918 chr3L 11087008 intron JIL-1 - chr3L 11087967 intron JIL-1 - chr3L 11088926 intron JIL-1 - chr3L_18_11085001 chr3L_11085001 RAL-849 2470 chr3L 11104048 11104057 chr3L 11104180 11104189 6 132 10.5 0.0 5.2 1.0 141 chr3L 11104048 intergenic CG32071 - chr3L 11104118 intergenic CG32071 - chr3L 11104189 intergenic CG32071 - chr3L_6_11100001 chr3L_11100001 RAL-849 2471 chr3L 11105042 11105050 chr3L 11105174 11105182 5 132 0.0 5.0 2.5 1.4 140 chr3L 11105042 intergenic not near genes chr3L 11105112 intergenic not near genes chr3L 11105182 intergenic not near genes chr3L_5_11105001 chr3L_11105001 RAL-849 2472 chr3L 11105248 11105322 chr3L 11107009 11107074 X-element 26 1756 5.0 10.5 7.8 3.0 1826 chr3L 11105248 intergenic not near genes chr3L 11106161 intergenic not near genes chr3L 11107074 exon CG32073 - chr3L_26_11105001 chr3L_11105001 RAL-849 2473 chr3L 11113947 11113986 chr3L 11114074 11114103 7 125 13.5 0.0 6.8 0.9 156 chr3L 11113947 intergenic Sod -,fd68A - chr3L 11114025 intergenic fd68A -,Sod - chr3L 11114103 intergenic fd68A -,Sod - chr3L_7_11110001 chr3L_11110001 RAL-849 2474 chr3L 11121603 11121622 chr3L 11122960 11122979 13 1358 45.0 59.5 52.2 0.2 1376 chr3L 11121603 exon mRpL2 + chr3L 11122291 exon Ufd1-like - chr3L 11122979 exon Ufd1-like - chr3L_13_11120001 chr3L_11120001 RAL-849 2475 chr3L 11121589 11121640 chr3L 11122982 11123027 21 1370 53.0 53.5 53.2 0.4 1438 chr3L 11121589 exon mRpL2 + chr3L 11122308 exon Ufd1-like - chr3L 11123027 exon Ufd1-like - chr3L_21_11120001 chr3L_11120001 RAL-849 2476 chr3L 11135480 11135779 chr3L 11135760 11135914 16 253 0.0 0.0 0.0 16.0 434 chr3L 11135480 3` UTR CG14143 + chr3L 11135697 intergenic CG14143 +,CG32082 + chr3L 11135914 intergenic CG32082 +,CG14143 + chr3L_16_11135001 chr3L_11135001 RAL-849 2477 chr3L 11135791 11135799 chr3L 11135926 11135934 4 135 0.0 9.5 4.8 0.7 143 chr3L 11135791 intergenic CG32082 +,CG14143 + chr3L 11135862 intergenic CG32082 +,CG14143 + chr3L 11135934 intergenic CG32082 +,CG14143 + chr3L_4_11135001 chr3L_11135001 RAL-849 2478 chr3L 11145537 11145551 chr3L 11145675 11145689 7 138 0.0 8.0 4.0 1.4 152 chr3L 11145537 intron CG32082 + chr3L 11145613 intron CG32082 + chr3L 11145689 intron CG32082 + chr3L_7_11145001 chr3L_11145001 RAL-849 2479 chr3L 11180646 11180656 chr3L 11180804 11180814 5 158 6.5 15.5 11.0 0.4 168 chr3L 11180646 intron GlcAT-P - chr3L 11180730 intron GlcAT-P - chr3L 11180814 intron GlcAT-P - chr3L_5_11180001 chr3L_11180001 RAL-849 2480 chr3L 11241730 11241792 chr3L 11241862 11241924 8 132 3.0 3.5 3.2 1.9 194 chr3L 11241730 intergenic not near genes chr3L 11241827 intergenic not near genes chr3L 11241924 intergenic not near genes chr3L_8_11240001 chr3L_11240001 RAL-849 2481 chr3L 11264422 11264488 chr3L 11271424 11271490 17.6 11 7002 6.0 3.5 4.8 1.9 7068 chr3L 11264422 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271490 intergenic not near genes chr3L_11_11265001 chr3L_11265001 RAL-849 2482 chr3L 11297584 11297642 chr3L 11297710 11297719 8 117 10.0 6.5 8.2 0.9 135 chr3L 11297584 intergenic not near genes chr3L 11297652 intergenic not near genes chr3L 11297719 intergenic not near genes chr3L_8_11295001 chr3L_11295001 RAL-849 2483 chr3L 11304667 11304702 chr3L 11304877 11304950 7 237 14.5 0.0 7.2 0.9 283 chr3L 11304667 intergenic not near genes chr3L 11304808 intergenic not near genes chr3L 11304950 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-849 2484 chr3L 11329669 11329718 chr3L 11332922 11332973 jockey 11 3253 7.5 12.5 10.0 1.0 3304 chr3L 11329669 intergenic not near genes chr3L 11331321 intergenic not near genes chr3L 11332973 intergenic not near genes chr3L_11_11330001 chr3L_11330001 RAL-849 2485 chr3L 11353089 11353162 chr3L 11353222 11353285 30 132 6.5 7.0 6.8 3.8 196 chr3L 11353089 intergenic not near genes chr3L 11353187 intergenic not near genes chr3L 11353285 intergenic not near genes chr3L_30_11350001 chr3L_11350001 RAL-849 2486 chr3L 11386049 11386085 chr3L 11386174 11386212 11 125 10.5 9.0 9.8 1.0 163 chr3L 11386049 intergenic not near genes chr3L 11386130 intergenic not near genes chr3L 11386212 intergenic not near genes chr3L_11_11385001 chr3L_11385001 RAL-849 2487 chr3L 11427224 11427232 chr3L 11427347 11427366 4 131 1.5 6.0 3.8 0.8 142 chr3L 11427224 intergenic not near genes chr3L 11427295 intergenic not near genes chr3L 11427366 intergenic not near genes chr3L_4_11425001 chr3L_11425001 RAL-849 2488 chr3L 11432869 11432919 chr3L 11432998 11433048 13 129 10.5 7.5 9.0 1.3 179 chr3L 11432869 intergenic not near genes chr3L 11432958 intergenic not near genes chr3L 11433048 intergenic not near genes chr3L_13_11430001 chr3L_11430001 RAL-849 2489 chr3L 11441352 11441381 chr3L 11441481 11441510 4 129 0.0 7.5 3.8 0.8 158 chr3L 11441352 intergenic not near genes chr3L 11441431 intergenic not near genes chr3L 11441510 intergenic not near genes chr3L_4_11440001 chr3L_11440001 RAL-849 2490 chr3L 11474586 11474637 chr3L 11474725 11474776 15 139 8.5 0.0 4.2 2.9 190 chr3L 11474586 intergenic Vha16-2 + chr3L 11474681 intergenic Vha16-2 + chr3L 11474776 intergenic Vha16-2 + chr3L_15_11470001 chr3L_11470001 RAL-849 2491 chr3L 11579506 11579578 chr3L 11579662 11579734 30 156 5.0 7.0 6.0 4.3 228 chr3L 11579506 intergenic CG43390 - chr3L 11579620 intergenic CG43390 - chr3L 11579734 intergenic CG43390 - chr3L_30_11575001 chr3L_11575001 RAL-849 2492 chr3L 11590218 11590265 chr3L 11590358 11590405 14 140 0.5 2.0 1.2 6.4 187 chr3L 11590218 intergenic CG7377 + chr3L 11590312 intergenic CG7377 + chr3L 11590405 intergenic CG7377 +,CG33268 - chr3L_14_11590001 chr3L_11590001 RAL-849 2493 chr3L 11663702 11663735 chr3L 11663877 11663910 10 175 16.0 0.5 8.2 1.1 208 chr3L 11663702 intron CG32085 - chr3L 11663806 intron CG32085 - chr3L 11663910 intron CG32085 - chr3L_10_11660001 chr3L_11660001 RAL-849 2494 chr3L 11678056 11678115 chr3L 11678193 11678252 15 137 5.0 9.0 7.0 1.9 196 chr3L 11678056 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678252 intron CG32085 - chr3L_15_11675001 chr3L_11675001 RAL-849 2495 chr3L 11723048 11723104 chr3L 11727893 11727949 Doc 27 4845 7.0 10.0 8.5 2.8 4901 chr3L 11723048 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727949 3` UTR Bmcp + chr3L_27_11725001 chr3L_11725001 RAL-849 2496 chr3L 11729629 11729702 chr3L 11729755 11729828 36 125 5.0 7.0 6.0 5.1 199 chr3L 11729629 exon CG32088 + chr3L 11729728 intron CG32088 + chr3L 11729828 exon CG32088 + chr3L_36_11725001 chr3L_11725001 RAL-849 2497 chr3L 11743975 11744042 chr3L 11744133 11744200 17 157 6.0 1.5 3.8 3.5 225 chr3L 11743975 exon CG6024 - chr3L 11744088 intron CG6024 - chr3L 11744200 intron CG6024 - chr3L_17_11740001 chr3L_11740001 RAL-849 2498 chr3L 11746618 11746681 chr3L 11746747 11746810 23 128 0.0 8.5 4.2 4.4 192 chr3L 11746618 intron CG6024 - chr3L 11746714 intron CG6024 - chr3L 11746810 intron CG6024 - chr3L_23_11745001 chr3L_11745001 RAL-849 2499 chr3L 9313026 9313027 chr3L 11777678 11777678 5 2464651 30.5 34.0 32.2 0.2 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_10545001 chr3L_10545001 RAL-849 2500 chr3L 11816766 11816803 chr3L 11816917 11816954 18 150 15.5 12.0 13.8 1.2 188 chr3L 11816766 3` UTR CG5946 - chr3L 11816860 3` UTR CG5946 - chr3L 11816954 3` UTR CG5946 - chr3L_18_11815001 chr3L_11815001 RAL-849 2501 chr3L 11818929 11819141 chr3L 11819058 11819236 14 125 0.0 0.5 0.2 11.7 307 chr3L 11818929 intron CG5946 - chr3L 11819082 intron CG5946 - chr3L 11819236 intron CG5946 - chr3L_14_11815001 chr3L_11815001 RAL-849 2502 chr3L 11840160 11840222 chr3L 11840440 11840502 23 279 7.5 9.0 8.2 2.5 342 chr3L 11840160 intergenic not near genes chr3L 11840331 intergenic not near genes chr3L 11840502 intergenic not near genes chr3L_23_11840001 chr3L_11840001 RAL-849 2503 chr3L 11849281 11849356 chr3L 11849431 11849506 32 149 5.0 4.5 4.8 5.5 225 chr3L 11849281 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849506 intergenic not near genes chr3L_32_11845001 chr3L_11845001 RAL-849 2504 chr3L 11864513 11864579 chr3L 11865858 11865924 pogo 25 1344 9.5 13.0 11.2 2.0 1411 chr3L 11864513 intron CG44837 - chr3L 11865218 intron CG44837 - chr3L 11865924 intron CG44837 - chr3L_25_11865001 chr3L_11865001 RAL-849 2505 chr3L 11887208 11887266 chr3L 11887355 11887417 13 149 15.0 0.0 7.5 1.5 209 chr3L 11887208 intron CG44837 - chr3L 11887312 intron,3` UTR CG44837 -,CG5897 - chr3L 11887417 intron,3` UTR CG44837 -,CG5897 - chr3L_13_11885001 chr3L_11885001 RAL-849 2506 chr3L 12013866 12013937 chr3L 12014007 12014078 29 138 8.0 6.5 7.2 3.5 212 chr3L 12013866 intron rols - chr3L 12013972 intron rols - chr3L 12014078 intron rols - chr3L_29_12010001 chr3L_12010001 RAL-849 2507 chr3L 12034838 12034913 chr3L 12034965 12035040 14 127 8.0 6.0 7.0 1.8 202 chr3L 12034838 intron rols - chr3L 12034939 intron rols - chr3L 12035040 intron rols - chr3L_14_12030001 chr3L_12030001 RAL-849 2508 chr3L 12052663 12052734 chr3L 12052802 12052873 25 139 8.5 12.5 10.5 2.2 210 chr3L 12052663 intron rols - chr3L 12052768 intron rols - chr3L 12052873 intron rols - chr3L_25_12050001 chr3L_12050001 RAL-849 2509 chr3L 12075379 12075445 chr3L 12075518 12075579 12 136 5.5 0.0 2.8 3.2 200 chr3L 12075379 intron Sema-5c - chr3L 12075479 intron Sema-5c - chr3L 12075579 intron Sema-5c - chr3L_12_12075001 chr3L_12075001 RAL-849 2510 chr3L 12083928 12083997 chr3L 12084061 12084131 11 134 22.0 15.5 18.8 0.6 203 chr3L 12083928 intergenic not near genes chr3L 12084030 intergenic not near genes chr3L 12084131 intergenic not near genes chr3L_11_12080001 chr3L_12080001 RAL-849 2511 chr3L 12092346 12092421 chr3L 12092473 12092548 19 126 3.0 7.5 5.2 3.1 202 chr3L 12092346 intergenic not near genes chr3L 12092447 intergenic not near genes chr3L 12092548 intergenic not near genes chr3L_19_12090001 chr3L_12090001 RAL-849 2512 chr3L 12114837 12114847 chr3L 12114968 12114978 5 131 4.5 3.5 4.0 1.0 141 chr3L 12114837 intergenic not near genes chr3L 12114908 intergenic not near genes chr3L 12114978 intergenic not near genes chr3L_5_12110001 chr3L_12110001 RAL-849 2513 chr3L 12170745 12170817 chr3L 12170877 12170949 12 131 4.0 9.0 6.5 1.6 204 chr3L 12170745 intron Rh7 - chr3L 12170847 intron Rh7 - chr3L 12170949 intron Rh7 - chr3L_12_12170001 chr3L_12170001 RAL-849 2514 chr3L 12283502 12283507 chr3L 12283632 12283637 6 130 8.0 4.5 6.2 0.8 135 chr3L 12283502 intergenic not near genes chr3L 12283570 intergenic not near genes chr3L 12283637 intergenic not near genes chr3L_6_12280001 chr3L_12280001 RAL-849 2515 chr3L 12283509 12283535 chr3L 12283629 12283665 11 127 4.5 4.5 4.5 2.0 156 chr3L 12283509 intergenic not near genes chr3L 12283587 intergenic not near genes chr3L 12283665 intergenic not near genes chr3L_11_12280001 chr3L_12280001 RAL-849 2516 chr3L 12326337 12326407 chr3L 12326469 12326543 23 136 9.0 5.0 7.0 2.9 206 chr3L 12326337 intergenic not near genes chr3L 12326440 intergenic not near genes chr3L 12326543 intergenic not near genes chr3L_23_12325001 chr3L_12325001 RAL-849 2517 chr3L 12344936 12345002 chr3L 12345070 12345136 18 134 5.0 0.5 2.8 4.7 200 chr3L 12344936 intron CrzR - chr3L 12345036 intron CrzR - chr3L 12345136 intron CrzR - chr3L_18_12345001 chr3L_12345001 RAL-849 2518 chr3L 12364124 12364156 chr3L 12364312 12364344 8 188 5.5 5.5 5.5 1.2 220 chr3L 12364124 intergenic not near genes chr3L 12364234 intergenic not near genes chr3L 12364344 intergenic not near genes chr3L_8_12360001 chr3L_12360001 RAL-849 2519 chr3L 12369486 12369557 chr3L 12369626 12369697 29 140 2.0 7.5 4.8 5.0 211 chr3L 12369486 intron Ncc69 - chr3L 12369592 intron Ncc69 - chr3L 12369697 intron Ncc69 - chr3L_29_12365001 chr3L_12365001 RAL-849 2520 chr3L 12446219 12446299 chr3L 12446347 12446361 29 110 7.5 5.5 6.5 3.9 142 chr3L 12446219 intergenic not near genes chr3L 12446290 intergenic not near genes chr3L 12446361 intergenic not near genes chr3L_29_12445001 chr3L_12445001 RAL-849 2521 chr3L 12458483 12458503 chr3L 12458632 12458652 5 149 3.5 3.0 3.2 1.2 169 chr3L 12458483 intergenic not near genes chr3L 12458568 intergenic not near genes chr3L 12458652 intergenic not near genes chr3L_5_12455001 chr3L_12455001 RAL-849 2522 chr3L 12476240 12476318 chr3L 12476367 12476444 25 126 2.0 5.5 3.8 5.2 204 chr3L 12476240 intron CG10663 - chr3L 12476342 intron CG10663 - chr3L 12476444 intron CG10663 - chr3L_25_12475001 chr3L_12475001 RAL-849 2523 chr3L 12478540 12478601 chr3L 12478683 12478725 17 139 6.0 8.5 7.2 2.1 185 chr3L 12478540 intron CG10663 - chr3L 12478632 intron CG10663 - chr3L 12478725 intron CG10663 - chr3L_17_12475001 chr3L_12475001 RAL-849 2524 chr3L 12491673 12491711 chr3L 12491800 12491844 6 132 0.0 5.5 2.8 1.6 171 chr3L 12491673 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491758 intergenic CG10657 -,CR45682 + chr3L 12491844 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_6_12490001 chr3L_12490001 RAL-849 2525 chr3L 12501628 12501690 chr3L 12501765 12501827 27 136 9.5 8.5 9.0 2.7 199 chr3L 12501628 5` UTR CG10681 + chr3L 12501728 intron CG10681 + chr3L 12501827 exon CG10681 + chr3L_27_12500001 chr3L_12500001 RAL-849 2526 chr3L 12555585 12555644 chr3L 12555729 12555786 10 144 7.5 5.0 6.2 1.4 201 chr3L 12555585 intron sowah - chr3L 12555686 intron sowah - chr3L 12555786 intron sowah - chr3L_10_12555001 chr3L_12555001 RAL-849 2527 chr3L 12605679 12605748 chr3L 12605808 12605878 17 129 5.0 6.5 5.8 2.5 199 chr3L 12605679 intergenic not near genes chr3L 12605778 intergenic not near genes chr3L 12605878 intergenic not near genes chr3L_17_12605001 chr3L_12605001 RAL-849 2528 chr3L 12610951 12611028 chr3L 12611247 12611269 14 292 0.0 1.5 0.8 7.8 318 chr3L 12610951 intron caup + chr3L 12611110 intron caup + chr3L 12611269 intron caup + chr3L_14_12610001 chr3L_12610001 RAL-849 2529 chr3L 12620927 12620985 chr3L 12621075 12621098 22 142 10.5 12.0 11.2 1.8 171 chr3L 12620927 3` UTR caup + chr3L 12621012 3` UTR caup + chr3L 12621098 3` UTR caup + chr3L_22_12620001 chr3L_12620001 RAL-849 2530 chr3L 12626121 12626159 chr3L 12626280 12626318 13 159 6.0 7.0 6.5 1.7 197 chr3L 12626121 intergenic not near genes chr3L 12626220 intergenic not near genes chr3L 12626318 intergenic not near genes chr3L_13_12625001 chr3L_12625001 RAL-849 2531 chr3L 12666880 12666955 chr3L 12667042 12667119 19 163 5.0 0.0 2.5 5.4 239 chr3L 12666880 intergenic not near genes chr3L 12667000 intergenic not near genes chr3L 12667119 intergenic not near genes chr3L_19_12665001 chr3L_12665001 RAL-849 2532 chr3L 12682427 12682432 chr3L 12682553 12682558 4 126 25.5 8.5 17.0 0.2 131 chr3L 12682427 intergenic not near genes chr3L 12682492 intergenic not near genes chr3L 12682558 intergenic not near genes chr3L_4_12680001 chr3L_12680001 RAL-849 2533 chr3L 12691349 12691410 chr3L 12691596 12691657 14 247 4.0 4.5 4.2 2.7 308 chr3L 12691349 intergenic not near genes chr3L 12691503 intergenic not near genes chr3L 12691657 intergenic not near genes chr3L_14_12690001 chr3L_12690001 RAL-849 2534 chr3L 12722253 12722285 chr3L 12722385 12722401 10 130 0.5 6.0 3.2 2.4 148 chr3L 12722253 intergenic not near genes chr3L 12722327 intergenic not near genes chr3L 12722401 intergenic not near genes chr3L_10_12720001 chr3L_12720001 RAL-849 2535 chr3L 12857947 12858000 chr3L 12858092 12858145 17 145 6.0 3.5 4.8 2.9 198 chr3L 12857947 3` UTR CG32107 - chr3L 12858046 3` UTR CG32107 - chr3L 12858145 3` UTR CG32107 - chr3L_17_12855001 chr3L_12855001 RAL-849 2536 chr3L 12874881 12874949 chr3L 12877223 12877291 jockey 18 2342 10.5 7.0 8.8 1.8 2410 chr3L 12874881 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877291 intergenic not near genes chr3L_18_12875001 chr3L_12875001 RAL-849 2537 chr3L 12894763 12894818 chr3L 12894891 12894897 18 124 13.5 14.5 14.0 1.2 134 chr3L 12894763 intergenic CG14118 + chr3L 12894830 intergenic CG14118 + chr3L 12894897 intergenic CG14118 + chr3L_18_12890001 chr3L_12890001 RAL-849 2538 chr3L 12919239 12919306 chr3L 12924762 12924840 Rt1c 11 5518 6.0 5.5 5.8 1.6 5601 chr3L 12919239 intergenic not near genes chr3L 12922040 intergenic not near genes chr3L 12924840 intergenic not near genes chr3L_11_12920001 chr3L_12920001 RAL-849 2539 chr3L 12937557 12937610 chr3L 12937687 12937738 4 130 3.5 0.0 1.8 1.4 181 chr3L 12937557 intergenic not near genes chr3L 12937648 intergenic not near genes chr3L 12937738 intergenic not near genes chr3L_4_12935001 chr3L_12935001 RAL-849 2540 chr3L 12938881 12938932 chr3L 12939021 12939072 22 140 6.0 4.5 5.2 3.5 191 chr3L 12938881 intergenic not near genes chr3L 12938976 intergenic not near genes chr3L 12939072 intergenic not near genes chr3L_22_12935001 chr3L_12935001 RAL-849 2541 chr3L 12957742 12957759 chr3L 12962274 12962291 copia 9 4532 17.0 9.0 13.0 0.6 4549 chr3L 12957742 intergenic not near genes chr3L 12960016 intergenic not near genes chr3L 12962291 intergenic not near genes chr3L_9_12960001 chr3L_12960001 RAL-849 2542 chr3L 12957760 12957809 chr3L 12962273 12962341 copia 17 4531 8.0 9.0 8.5 1.8 4581 chr3L 12957760 intergenic not near genes chr3L 12960050 intergenic not near genes chr3L 12962341 intergenic not near genes chr3L_17_12960001 chr3L_12960001 RAL-849 2543 chr3L 12977621 12977657 chr3L 12977931 12977967 12 309 12.5 5.5 9.0 1.2 346 chr3L 12977621 intergenic not near genes chr3L 12977794 intergenic not near genes chr3L 12977967 intergenic not near genes chr3L_12_12975001 chr3L_12975001 RAL-849 2544 chr3L 12977658 12977688 chr3L 12977928 12977998 15 303 6.5 4.5 5.5 2.3 340 chr3L 12977658 intergenic not near genes chr3L 12977828 intergenic not near genes chr3L 12977998 intergenic not near genes chr3L_15_12975001 chr3L_12975001 RAL-849 2545 chr3L 12978273 12978339 chr3L 12978419 12978486 21 147 5.0 3.5 4.2 4.0 213 chr3L 12978273 intergenic not near genes chr3L 12978380 intergenic not near genes chr3L 12978486 intergenic not near genes chr3L_21_12975001 chr3L_12975001 RAL-849 2546 chr3L 12980474 12980531 chr3L 12980612 12980674 16 138 8.0 0.0 4.0 3.2 200 chr3L 12980474 intergenic not near genes chr3L 12980574 intergenic not near genes chr3L 12980674 intergenic not near genes chr3L_16_12980001 chr3L_12980001 RAL-849 2547 chr3L 13008744 13008822 chr3L 13008953 13009024 21 206 4.5 11.0 7.8 2.4 280 chr3L 13008744 exon CG14117 + chr3L 13008884 intron CG14117 + chr3L 13009024 exon CG14117 + chr3L_21_13005001 chr3L_13005001 RAL-849 2548 chr3L 13017868 13017913 chr3L 13018000 13018045 13 132 8.0 6.0 7.0 1.6 177 chr3L 13017868 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017956 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018045 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_13_13015001 chr3L_13015001 RAL-849 2549 chr3L 13073991 13073997 chr3L 13074174 13074180 5 183 18.5 8.0 13.2 0.4 189 chr3L 13073991 intergenic not near genes chr3L 13074086 intergenic not near genes chr3L 13074180 intergenic not near genes chr3L_5_13070001 chr3L_13070001 RAL-849 2550 chr3L 13074001 13074065 chr3L 13074184 13074248 23 181 2.5 11.5 7.0 2.9 247 chr3L 13074001 intergenic not near genes chr3L 13074124 intergenic not near genes chr3L 13074248 intergenic not near genes chr3L_23_13070001 chr3L_13070001 RAL-849 2551 chr3L 13085040 13085075 chr3L 13085169 13085204 4 129 5.5 8.5 7.0 0.5 164 chr3L 13085040 intergenic not near genes chr3L 13085122 intergenic not near genes chr3L 13085204 intergenic not near genes chr3L_4_13085001 chr3L_13085001 RAL-849 2552 chr3L 13142105 13142176 chr3L 13142268 13142339 16 163 4.5 6.0 5.2 2.6 234 chr3L 13142105 intergenic not near genes chr3L 13142222 intergenic not near genes chr3L 13142339 intergenic not near genes chr3L_16_13140001 chr3L_13140001 RAL-849 2553 chr3L 13159242 13159296 chr3L 13159371 13159422 7 129 4.0 7.5 5.8 1.0 180 chr3L 13159242 intergenic not near genes chr3L 13159332 intergenic not near genes chr3L 13159422 intergenic not near genes chr3L_7_13155001 chr3L_13155001 RAL-849 2554 chr3L 13194025 13194088 chr3L 13194154 13194184 17 126 5.5 6.5 6.0 2.4 159 chr3L 13194025 intergenic not near genes chr3L 13194104 intergenic not near genes chr3L 13194184 intergenic not near genes chr3L_17_13190001 chr3L_13190001 RAL-849 2555 chr3L 13196145 13196182 chr3L 13196350 13196360 9 211 4.5 7.5 6.0 1.3 215 chr3L 13196145 intergenic not near genes chr3L 13196252 intergenic not near genes chr3L 13196360 intergenic not near genes chr3L_9_13195001 chr3L_13195001 RAL-849 2556 chr3L 13229372 13229441 chr3L 13229518 13229585 20 146 1.0 5.5 3.2 4.8 213 chr3L 13229372 intron caps + chr3L 13229478 intron caps + chr3L 13229585 intron caps + chr3L_20_13225001 chr3L_13225001 RAL-849 2557 chr3L 13241132 13241192 chr3L 13241269 13241329 23 136 11.5 7.5 9.5 2.2 197 chr3L 13241132 intron caps + chr3L 13241230 intron caps + chr3L 13241329 intron caps + chr3L_23_13240001 chr3L_13240001 RAL-849 2558 chr3L 13267277 13267293 chr3L 13267398 13267450 7 156 10.5 6.5 8.5 0.7 173 chr3L 13267277 intron caps + chr3L 13267364 intron caps + chr3L 13267450 intron caps + chr3L_7_13265001 chr3L_13265001 RAL-849 2559 chr3L 13314567 13314609 chr3L 13314696 13314741 14 132 6.5 7.0 6.8 1.8 174 chr3L 13314567 intergenic not near genes chr3L 13314654 intergenic not near genes chr3L 13314741 intergenic not near genes chr3L_14_13310001 chr3L_13310001 RAL-849 2560 chr3L 13315875 13315907 chr3L 13316189 13316221 7 314 1.5 4.0 2.8 1.8 346 chr3L 13315875 intergenic not near genes chr3L 13316048 intergenic not near genes chr3L 13316221 intergenic not near genes chr3L_7_13315001 chr3L_13315001 RAL-849 2561 chr3L 13317752 13317815 chr3L 13317886 13317955 19 140 0.0 6.0 3.0 4.8 203 chr3L 13317752 intergenic not near genes chr3L 13317854 intergenic not near genes chr3L 13317955 intergenic not near genes chr3L_19_13315001 chr3L_13315001 RAL-849 2562 chr3L 13337130 13337135 chr3L 13337271 13337276 5 141 8.0 8.0 8.0 0.6 146 chr3L 13337130 intergenic not near genes chr3L 13337203 intergenic not near genes chr3L 13337276 intergenic not near genes chr3L_5_13335001 chr3L_13335001 RAL-849 2563 chr3L 13337138 13337158 chr3L 13337266 13337299 7 139 5.0 5.0 5.0 1.2 161 chr3L 13337138 intergenic not near genes chr3L 13337218 intergenic not near genes chr3L 13337299 intergenic not near genes chr3L_7_13335001 chr3L_13335001 RAL-849 2564 chr3L 13379641 13379684 chr3L 13379861 13379904 8 220 6.0 4.5 5.2 1.3 263 chr3L 13379641 intron CG14111 + chr3L 13379772 intron CG14111 + chr3L 13379904 intron CG14111 + chr3L_8_13375001 chr3L_13375001 RAL-849 2565 chr3L 13392717 13392745 chr3L 13392850 13392878 6 133 11.5 0.0 5.8 0.9 161 chr3L 13392717 intergenic not near genes chr3L 13392798 intergenic not near genes chr3L 13392878 intergenic not near genes chr3L_6_13390001 chr3L_13390001 RAL-849 2566 chr3L 13400476 13400545 chr3L 13400601 13400671 15 126 5.5 3.0 4.2 2.9 195 chr3L 13400476 intron sens - chr3L 13400574 intron sens - chr3L 13400671 intron sens - chr3L_15_13400001 chr3L_13400001 RAL-849 2567 chr3L 13477008 13477036 chr3L 13477124 13477163 9 126 0.0 9.5 4.8 1.6 155 chr3L 13477008 intergenic not near genes chr3L 13477086 intergenic stv + chr3L 13477163 intergenic stv + chr3L_9_13475001 chr3L_13475001 RAL-849 2568 chr3L 13525116 13525180 chr3L 13532962 13533026 roo 39 7846 16.5 13.5 15.0 2.4 7910 chr3L 13525116 intergenic not near genes chr3L 13529071 intergenic not near genes chr3L 13533026 intergenic not near genes chr3L_39_13525001 chr3L_13525001 RAL-849 2569 chr3L 13574582 13574620 chr3L 13580142 13580181 Rt1c 11 5560 10.5 7.5 9.0 1.1 5599 chr3L 13574582 intron bru-3 - chr3L 13577382 intron bru-3 - chr3L 13580181 intron bru-3 - chr3L_11_13575001 chr3L_13575001 RAL-849 2570 chr3L 13595995 13596072 chr3L 13596160 13596237 15 162 6.0 5.0 5.5 2.3 242 chr3L 13595995 intron bru-3 - chr3L 13596116 intron bru-3 - chr3L 13596237 intron bru-3 - chr3L_15_13595001 chr3L_13595001 RAL-849 2571 chr3L 13629478 13629541 chr3L 13629639 13629702 21 158 8.0 8.0 8.0 2.3 224 chr3L 13629478 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629702 intron bru-3 - chr3L_21_13625001 chr3L_13625001 RAL-849 2572 chr3L 13677479 13677555 chr3L 13677606 13677682 26 127 10.0 11.0 10.5 2.3 203 chr3L 13677479 intron bru-3 - chr3L 13677580 intron bru-3 - chr3L 13677682 intron bru-3 - chr3L_26_13675001 chr3L_13675001 RAL-849 2573 chr3L 13703598 13703672 chr3L 13703725 13703799 27 124 4.5 5.0 4.8 4.7 201 chr3L 13703598 intron bru-3 - chr3L 13703698 intron bru-3 - chr3L 13703799 intron bru-3 - chr3L_27_13700001 chr3L_13700001 RAL-849 2574 chr3L 13804504 13804567 chr3L 13822840 13822903 roo 24 18335 9.0 10.0 9.5 2.3 18399 chr3L 13804504 intergenic not near genes chr3L 13813704 intergenic not near genes chr3L 13822903 intergenic not near genes chr3L_24_13810001 chr3L_13810001 RAL-849 2575 chr3L 13833959 13833974 chr3L 13834123 13834138 4 162 14.5 9.0 11.8 0.3 179 chr3L 13833959 intergenic not near genes chr3L 13834048 intergenic not near genes chr3L 13834138 intergenic not near genes chr3L_4_13830001 chr3L_13830001 RAL-849 2576 chr3L 13833977 13834002 chr3L 13834096 13834166 20 160 8.0 5.5 6.8 2.6 189 chr3L 13833977 intergenic not near genes chr3L 13834072 intergenic not near genes chr3L 13834166 intergenic not near genes chr3L_20_13830001 chr3L_13830001 RAL-849 2577 chr3L 13838886 13838958 chr3L 13839155 13839227 22 267 6.5 4.0 5.2 3.5 341 chr3L 13838886 intergenic not near genes chr3L 13839056 intergenic not near genes chr3L 13839227 intergenic not near genes chr3L_22_13835001 chr3L_13835001 RAL-849 2578 chr3L 13884334 13884384 chr3L 13884478 13884528 10 144 9.0 0.0 4.5 1.8 194 chr3L 13884334 intron dysc - chr3L 13884431 intron dysc - chr3L 13884528 intron dysc - chr3L_10_13880001 chr3L_13880001 RAL-849 2579 chr3L 13936462 13936652 chr3L 13936591 13936837 18 163 0.0 0.0 0.0 18.0 375 chr3L 13936462 intergenic not near genes chr3L 13936650 intergenic not near genes chr3L 13936837 intergenic not near genes chr3L_18_13935001 chr3L_13935001 RAL-849 2580 chr3L 13992364 13992407 chr3L 13992490 13992533 5 126 0.5 12.5 6.5 0.7 169 chr3L 13992364 intron CG17364 - chr3L 13992448 intron CG17364 - chr3L 13992533 intron CG17364 - chr3L_5_13990001 chr3L_13990001 RAL-849 2581 chr3L 14132819 14132900 chr3L 14133001 14133067 40 178 8.0 9.5 8.8 4.1 248 chr3L 14132819 intergenic not near genes chr3L 14132943 intergenic not near genes chr3L 14133067 intergenic not near genes chr3L_40_14130001 chr3L_14130001 RAL-849 2582 chr3L 14144212 14144283 chr3L 14144338 14144411 17 127 5.0 3.0 4.0 3.4 199 chr3L 14144212 intergenic not near genes chr3L 14144312 intergenic not near genes chr3L 14144411 intergenic not near genes chr3L_17_14140001 chr3L_14140001 RAL-849 2583 chr3L 14168295 14168314 chr3L 14168426 14168445 9 130 5.0 0.0 2.5 2.6 150 chr3L 14168295 intergenic not near genes chr3L 14168370 intergenic not near genes chr3L 14168445 intergenic not near genes chr3L_9_14165001 chr3L_14165001 RAL-849 2584 chr3L 14174069 14174085 chr3L 14174195 14174211 6 126 12.0 7.5 9.8 0.6 142 chr3L 14174069 intergenic not near genes chr3L 14174140 intergenic not near genes chr3L 14174211 intergenic not near genes chr3L_6_14170001 chr3L_14170001 RAL-849 2585 chr3L 14175858 14175934 chr3L 14175993 14176059 29 128 6.5 6.0 6.2 4.0 201 chr3L 14175858 3` UTR D - chr3L 14175958 3` UTR D - chr3L 14176059 3` UTR D - chr3L_29_14175001 chr3L_14175001 RAL-849 2586 chr3L 14185115 14185182 chr3L 14185241 14185308 27 125 10.0 5.0 7.5 3.2 193 chr3L 14185115 intergenic not near genes chr3L 14185212 intergenic not near genes chr3L 14185308 intergenic not near genes chr3L_27_14185001 chr3L_14185001 RAL-849 2587 chr3L 14193372 14193445 chr3L 14193671 14193744 14 299 4.5 6.0 5.2 2.3 372 chr3L 14193372 intron nuf + chr3L 14193558 intron nuf + chr3L 14193744 intron nuf + chr3L_14_14190001 chr3L_14190001 RAL-849 2588 chr3L 14209836 14209915 chr3L 14209972 14210052 21 136 7.0 5.5 6.2 2.9 216 chr3L 14209836 intron nuf + chr3L 14209944 intron nuf + chr3L 14210052 intron nuf + chr3L_21_14205001 chr3L_14205001 RAL-849 2589 chr3L 14226692 14226752 chr3L 14226955 14227015 10 263 4.5 2.5 3.5 2.2 323 chr3L 14226692 intron nuf + chr3L 14226854 intron nuf + chr3L 14227015 intron nuf + chr3L_10_14225001 chr3L_14225001 RAL-849 2590 chr3L 14236000 14236037 chr3L 14236187 14236208 9 185 10.5 5.0 7.8 1.0 208 chr3L 14236000 intergenic CG34244 - chr3L 14236104 intergenic CG34244 - chr3L 14236208 intergenic CG34244 -,CG7906 + chr3L_9_14235001 chr3L_14235001 RAL-849 2591 chr3L 14267329 14267390 chr3L 14271819 14271880 F-element 14 4488 9.0 10.0 9.5 1.3 4551 chr3L 14267329 intergenic not near genes chr3L 14269604 intergenic not near genes chr3L 14271880 intergenic not near genes chr3L_14_14265001 chr3L_14265001 RAL-849 2592 chr3L 14282540 14282602 chr3L 14282670 14282732 29 126 8.5 12.0 10.2 2.6 192 chr3L 14282540 intron fz + chr3L 14282636 intron fz + chr3L 14282732 intron fz + chr3L_29_14280001 chr3L_14280001 RAL-849 2593 chr3L 14286620 14286674 chr3L 14286749 14286783 12 127 5.5 8.0 6.8 1.5 163 chr3L 14286620 intron fz + chr3L 14286702 intron fz + chr3L 14286783 intron fz + chr3L_12_14285001 chr3L_14285001 RAL-849 2594 chr3L 14295940 14296006 chr3L 14296476 14296542 roo 24 532 8.5 15.5 12.0 1.8 602 chr3L 14295940 intron fz + chr3L 14296241 intron fz + chr3L 14296542 intron fz + chr3L_24_14295001 chr3L_14295001 RAL-849 2595 chr3L 14302942 14303009 chr3L 14303077 14303139 17 129 5.0 2.5 3.8 3.5 197 chr3L 14302942 intron fz + chr3L 14303040 intron fz + chr3L 14303139 intron fz + chr3L_17_14300001 chr3L_14300001 RAL-849 2596 chr3L 14303468 14303499 chr3L 14303639 14303669 10 170 0.0 11.0 5.5 1.5 201 chr3L 14303468 intron fz + chr3L 14303568 intron fz + chr3L 14303669 intron fz + chr3L_10_14300001 chr3L_14300001 RAL-849 2597 chr3L 14312020 14312054 chr3L 14316833 14316898 X-element 9 4842 4.5 4.0 4.2 1.7 4878 chr3L 14312020 exon fz + chr3L 14314459 intron fz + chr3L 14316898 intron fz + chr3L_9_14310001 chr3L_14310001 RAL-849 2598 chr3L 14341399 14341436 chr3L 14341584 14341621 9 185 0.0 6.5 3.2 2.1 222 chr3L 14341399 intron fz + chr3L 14341510 intron fz + chr3L 14341621 intron fz + chr3L_9_14340001 chr3L_14340001 RAL-849 2599 chr3L 14440718 14440772 chr3L 14440853 14440907 18 135 3.0 5.0 4.0 3.6 189 chr3L 14440718 intron bbg - chr3L 14440812 intron bbg - chr3L 14440907 intron bbg - chr3L_18_14440001 chr3L_14440001 RAL-849 2600 chr3L 14455360 14455373 chr3L 14455489 14455502 8 129 7.5 5.5 6.5 1.1 142 chr3L 14455360 intron bbg - chr3L 14455431 intron bbg - chr3L 14455502 intron bbg - chr3L_8_14455001 chr3L_14455001 RAL-849 2601 chr3L 14468403 14468477 chr3L 14473659 14473733 copia 18 5256 3.5 5.5 4.5 3.3 5330 chr3L 14468403 intron bbg - chr3L 14471068 intron bbg - chr3L 14473733 intron bbg - chr3L_18_14470001 chr3L_14470001 RAL-849 2602 chr3L 14502303 14502340 chr3L 14502493 14502529 7 190 11.0 7.0 9.0 0.7 226 chr3L 14502303 intron bbg - chr3L 14502416 intron bbg - chr3L 14502529 intron bbg - chr3L_7_14500001 chr3L_14500001 RAL-849 2603 chr3L 14519542 14519618 chr3L 14519681 14519757 13 139 5.0 6.0 5.5 2.0 215 chr3L 14519542 intron bbg - chr3L 14519650 intron bbg - chr3L 14519757 intron bbg - chr3L_13_14515001 chr3L_14515001 RAL-849 2604 chr3L 14546761 14546817 chr3L 14546912 14546968 8 151 0.0 7.5 3.8 1.7 207 chr3L 14546761 intron CG9238 - chr3L 14546864 intron CG9238 - chr3L 14546968 intron CG9238 - chr3L_8_14545001 chr3L_14545001 RAL-849 2605 chr3L 14549524 14549587 chr3L 14549668 14549731 16 144 6.5 4.0 5.2 2.6 207 chr3L 14549524 intron CG9238 - chr3L 14549628 intron CG9238 - chr3L 14549731 intron CG9238 - chr3L_16_14545001 chr3L_14545001 RAL-849 2606 chr3L 14568990 14569048 chr3L 14569123 14569181 10 133 5.0 1.5 3.2 2.4 191 chr3L 14568990 intergenic not near genes chr3L 14569086 intergenic not near genes chr3L 14569181 intergenic not near genes chr3L_10_14565001 chr3L_14565001 RAL-849 2607 chr3L 14633331 14633396 chr3L 14633488 14633553 14 157 11.0 7.5 9.2 1.4 222 chr3L 14633331 exon dlp + chr3L 14633442 intron dlp + chr3L 14633553 intron dlp + chr3L_14_14630001 chr3L_14630001 RAL-849 2608 chr3L 14721150 14721187 chr3L 14723041 14723079 Rt1c 13 1886 11.0 9.5 10.2 1.2 1929 chr3L 14721150 intron ome + chr3L 14722114 intron ome + chr3L 14723079 intron ome + chr3L_13_14720001 chr3L_14720001 RAL-849 2609 chr3L 14721188 14721202 chr3L 14723037 14723078 Rt1c 8 1874 8.5 9.0 8.8 0.8 1890 chr3L 14721188 intron ome + chr3L 14722133 intron ome + chr3L 14723078 intron ome + chr3L_8_14720001 chr3L_14720001 RAL-849 2610 chr3L 14725562 14725615 chr3L 14728606 14728659 Doc 8 3044 2.5 8.0 5.2 1.3 3097 chr3L 14725562 intron ome + chr3L 14727110 intron ome + chr3L 14728659 intron ome + chr3L_8_14725001 chr3L_14725001 RAL-849 2611 chr3L 14741091 14741161 chr3L 14741219 14741289 36 128 5.5 12.5 9.0 3.6 198 chr3L 14741091 intron ome + chr3L 14741190 intron ome + chr3L 14741289 intron ome + chr3L_36_14740001 chr3L_14740001 RAL-849 2612 chr3L 14825127 14825151 chr3L 14832904 14832928 Stalker2 5 7777 5.5 16.0 10.8 0.4 7801 chr3L 14825127 intron CG17839 + chr3L 14829028 intron CG17839 + chr3L 14832928 intron CG17839 + chr3L_5_14825001 chr3L_14825001 RAL-849 2613 chr3L 14861759 14861831 chr3L 14861889 14861961 15 129 3.5 4.5 4.0 3.0 202 chr3L 14861759 intron CG17839 + chr3L 14861860 intron CG17839 + chr3L 14861961 intron CG17839 + chr3L_15_14860001 chr3L_14860001 RAL-849 2614 chr3L 14867580 14867643 chr3L 14867713 14867777 25 132 5.0 10.5 7.8 2.8 197 chr3L 14867580 exon CG17839 + chr3L 14867678 intron CG17839 + chr3L 14867777 intron CG17839 + chr3L_25_14865001 chr3L_14865001 RAL-849 2615 chr3L 14894993 14895050 chr3L 14895183 14895240 11 190 4.5 7.0 5.8 1.6 247 chr3L 14894993 intergenic not near genes chr3L 14895116 intergenic not near genes chr3L 14895240 intergenic not near genes chr3L_11_14895001 chr3L_14895001 RAL-849 2616 chr3L 14895052 14895058 chr3L 14895174 14895248 13 163 3.0 6.0 4.5 2.4 196 chr3L 14895052 intergenic not near genes chr3L 14895150 intergenic not near genes chr3L 14895248 intergenic not near genes chr3L_13_14895001 chr3L_14895001 RAL-849 2617 chr3L 14913861 14913913 chr3L 14913988 14914040 19 127 8.0 9.0 8.5 2.0 179 chr3L 14913861 intron DCX-EMAP + chr3L 14913950 intron DCX-EMAP + chr3L 14914040 intron DCX-EMAP + chr3L_19_14910001 chr3L_14910001 RAL-849 2618 chr3L 14922063 14922130 chr3L 14922221 14922288 17 158 9.0 0.0 4.5 3.1 225 chr3L 14922063 intron DCX-EMAP + chr3L 14922176 intron DCX-EMAP + chr3L 14922288 intron DCX-EMAP + chr3L_17_14920001 chr3L_14920001 RAL-849 2619 chr3L 14959942 14960014 chr3L 14960076 14960148 21 134 2.0 5.5 3.8 4.4 206 chr3L 14959942 intergenic not near genes chr3L 14960045 intergenic not near genes chr3L 14960148 intergenic not near genes chr3L_21_14960001 chr3L_14960001 RAL-849 2620 chr3L 14970719 14970760 chr3L 14971079 14971120 F-element 9 360 6.5 4.5 5.5 1.4 401 chr3L 14970719 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971120 intergenic not near genes chr3L_9_14970001 chr3L_14970001 RAL-849 2621 chr3L 15024003 15024054 chr3L 15024131 15024183 7 129 0.0 9.5 4.8 1.2 180 chr3L 15024003 intron,3` UTR Sytbeta -,CG32148 + chr3L 15024093 intron Sytbeta - chr3L 15024183 intron Sytbeta - chr3L_7_15020001 chr3L_15020001 RAL-849 2622 chr3L 15046022 15046101 chr3L 15046158 15046231 23 133 4.5 4.0 4.2 4.4 209 chr3L 15046022 intron Sytbeta - chr3L 15046126 intron Sytbeta - chr3L 15046231 intron Sytbeta - chr3L_23_15045001 chr3L_15045001 RAL-849 2623 chr3L 15084732 15084738 chr3L 15084858 15084864 5 126 3.5 3.5 3.5 1.1 132 chr3L 15084732 intron cp309 - chr3L 15084798 intron cp309 - chr3L 15084864 intron cp309 - chr3L_5_15080001 chr3L_15080001 RAL-849 2624 chr3L 15084999 15085077 chr3L 15086215 15086291 1360 19 1215 6.0 4.0 5.0 3.2 1292 chr3L 15084999 intron cp309 - chr3L 15085645 intron cp309 - chr3L 15086291 intron cp309 - chr3L_19_15085001 chr3L_15085001 RAL-849 2625 chr3L 15094922 15094962 chr3L 15095068 15095108 12 146 5.5 7.0 6.2 1.7 186 chr3L 15094922 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095015 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095108 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_12_15095001 chr3L_15095001 RAL-849 2626 chr3L 15146114 15146172 chr3L 15146241 15146311 18 128 0.0 4.0 2.0 6.0 197 chr3L 15146114 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146311 3` UTR Pex3 + chr3L_18_15145001 chr3L_15145001 RAL-849 2627 chr3L 15164987 15165003 chr3L 15165135 15165151 7 148 8.5 0.0 4.2 1.3 164 chr3L 15164987 intergenic not near genes chr3L 15165069 intergenic not near genes chr3L 15165151 intergenic not near genes chr3L_7_15165001 chr3L_15165001 RAL-849 2628 chr3L 15219724 15219769 chr3L 15219856 15219901 16 132 4.0 9.0 6.5 2.1 177 chr3L 15219724 intergenic not near genes chr3L 15219812 intergenic not near genes chr3L 15219901 intergenic not near genes chr3L_16_15215001 chr3L_15215001 RAL-849 2629 chr3L 15233512 15233568 chr3L 15233643 15233699 13 131 6.0 2.5 4.2 2.5 187 chr3L 15233512 intergenic not near genes chr3L 15233606 intergenic not near genes chr3L 15233699 intergenic not near genes chr3L_13_15230001 chr3L_15230001 RAL-849 2630 chr3L 15257410 15257446 chr3L 15257664 15257709 7 262 2.5 0.5 1.5 2.8 299 chr3L 15257410 intergenic not near genes chr3L 15257560 intergenic not near genes chr3L 15257709 intergenic not near genes chr3L_7_15255001 chr3L_15255001 RAL-849 2631 chr3L 15287638 15287696 chr3L 15287858 15287916 18 220 7.5 7.5 7.5 2.1 278 chr3L 15287638 intergenic not near genes chr3L 15287777 intergenic not near genes chr3L 15287916 intergenic not near genes chr3L_18_15285001 chr3L_15285001 RAL-849 2632 chr3L 15295730 15295801 chr3L 15298623 15298664 gypsy5 23 2892 10.5 5.0 7.8 2.6 2934 chr3L 15295730 intergenic not near genes chr3L 15297197 intergenic not near genes chr3L 15298664 intergenic Best4 + chr3L_23_15295001 chr3L_15295001 RAL-849 2633 chr3L 15333091 15333166 chr3L 15333223 15333298 10 129 5.0 6.5 5.8 1.5 207 chr3L 15333091 intergenic CR43247 + chr3L 15333194 intergenic CR43247 + chr3L 15333298 intergenic CR43247 + chr3L_10_15330001 chr3L_15330001 RAL-849 2634 chr3L 15405984 15406045 chr3L 15406116 15406178 15 132 4.0 7.0 5.5 2.3 194 chr3L 15405984 intergenic not near genes chr3L 15406081 intergenic not near genes chr3L 15406178 intergenic not near genes chr3L_15_15405001 chr3L_15405001 RAL-849 2635 chr3L 15423716 15423783 chr3L 15426610 15426677 opus 19 2894 7.0 1.0 4.0 3.8 2961 chr3L 15423716 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426677 intergenic not near genes chr3L_19_15425001 chr3L_15425001 RAL-849 2636 chr3L 15443538 15443605 chr3L 15443664 15443732 12 126 3.0 6.0 4.5 2.2 194 chr3L 15443538 intergenic not near genes chr3L 15443635 intergenic not near genes chr3L 15443732 intergenic not near genes chr3L_12_15440001 chr3L_15440001 RAL-849 2637 chr3L 15444610 15444650 chr3L 15444754 15444794 24 144 11.5 5.0 8.2 2.6 184 chr3L 15444610 intergenic not near genes chr3L 15444702 intergenic not near genes chr3L 15444794 intergenic not near genes chr3L_24_15440001 chr3L_15440001 RAL-849 2638 chr3L 15444651 15444681 chr3L 15444745 15444825 9 137 6.5 3.5 5.0 1.5 174 chr3L 15444651 intergenic not near genes chr3L 15444738 intergenic not near genes chr3L 15444825 intergenic not near genes chr3L_9_15440001 chr3L_15440001 RAL-849 2639 chr3L 15447883 15447948 chr3L 15448028 15448093 18 144 4.0 9.0 6.5 2.4 210 chr3L 15447883 intergenic not near genes chr3L 15447988 intergenic not near genes chr3L 15448093 intergenic not near genes chr3L_18_15445001 chr3L_15445001 RAL-849 2640 chr3L 15457128 15457160 chr3L 15457258 15457290 5 130 7.0 0.0 3.5 1.1 162 chr3L 15457128 intergenic CR45395 + chr3L 15457209 intergenic CR45395 + chr3L 15457290 intergenic CR45395 + chr3L_5_15455001 chr3L_15455001 RAL-849 2641 chr3L 15465990 15466136 chr3L 15466122 15466282 19 145 0.0 0.0 0.0 19.0 292 chr3L 15465990 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466282 intergenic not near genes chr3L_19_15465001 chr3L_15465001 RAL-849 2642 chr3L 15480503 15480576 chr3L 15480997 15481070 16 491 4.0 5.0 4.5 2.9 567 chr3L 15480503 intergenic not near genes chr3L 15480786 intergenic not near genes chr3L 15481070 intergenic not near genes chr3L_16_15480001 chr3L_15480001 RAL-849 2643 chr3L 15482272 15482339 chr3L 15482416 15482491 13 149 8.0 4.0 6.0 1.9 219 chr3L 15482272 intergenic not near genes chr3L 15482382 intergenic not near genes chr3L 15482491 intergenic not near genes chr3L_13_15480001 chr3L_15480001 RAL-849 2644 chr3L 15493317 15493343 chr3L 15493462 15493488 7 145 3.0 8.0 5.5 1.1 171 chr3L 15493317 exon CG12355 - chr3L 15493402 intron CG12355 - chr3L 15493488 5` UTR CG12355 - chr3L_7_15490001 chr3L_15490001 RAL-849 2645 chr3L 15540906 15540921 chr3L 15541031 15541047 4 126 6.0 9.0 7.5 0.5 141 chr3L 15540906 intron CrebA + chr3L 15540976 intron CrebA + chr3L 15541047 intron CrebA + chr3L_4_15540001 chr3L_15540001 RAL-849 2646 chr3L 15541573 15541644 chr3L 15541714 15541785 26 140 9.5 0.5 5.0 4.3 212 chr3L 15541573 intron CrebA + chr3L 15541679 intron CrebA + chr3L 15541785 intron CrebA + chr3L_26_15540001 chr3L_15540001 RAL-849 2647 chr3L 15541910 15541973 chr3L 15542054 15542117 12 143 0.0 4.5 2.2 3.8 207 chr3L 15541910 intron CrebA + chr3L 15542014 intron CrebA + chr3L 15542117 intron CrebA + chr3L_12_15540001 chr3L_15540001 RAL-849 2648 chr3L 15593795 15593860 chr3L 15593939 15594003 20 142 9.0 12.0 10.5 1.7 208 chr3L 15593795 intron RhoGAP71E + chr3L 15593899 intron RhoGAP71E + chr3L 15594003 intron RhoGAP71E + chr3L_20_15590001 chr3L_15590001 RAL-849 2649 chr3L 15600118 15600197 chr3L 15600253 15600348 18 150 6.5 0.0 3.2 4.3 230 chr3L 15600118 intron RhoGAP71E + chr3L 15600233 intron RhoGAP71E + chr3L 15600348 intron RhoGAP71E + chr3L_18_15600001 chr3L_15600001 RAL-849 2650 chr3L 15754432 15754614 chr3L 15754574 15754687 28 135 1.5 0.0 0.8 15.6 255 chr3L 15754432 intergenic not near genes chr3L 15754560 intergenic not near genes chr3L 15754687 intergenic not near genes chr3L_28_15750001 chr3L_15750001 RAL-849 2651 chr3L 15773797 15773873 chr3L 15773927 15774003 26 129 7.0 7.5 7.2 3.2 206 chr3L 15773797 intergenic not near genes chr3L 15773900 intergenic not near genes chr3L 15774003 intergenic not near genes chr3L_26_15770001 chr3L_15770001 RAL-849 2652 chr3L 15774855 15774872 chr3L 15774995 15775012 8 140 7.0 5.0 6.0 1.1 157 chr3L 15774855 intergenic not near genes chr3L 15774934 intergenic not near genes chr3L 15775012 intergenic not near genes chr3L_8_15770001 chr3L_15770001 RAL-849 2653 chr3L 15781604 15781687 chr3L 15781785 15781886 6 192 3.5 0.0 1.8 2.1 282 chr3L 15781604 intergenic not near genes chr3L 15781745 intergenic not near genes chr3L 15781886 intergenic not near genes chr3L_6_15780001 chr3L_15780001 RAL-849 2654 chr3L 15810913 15810985 chr3L 15812399 15812471 17 1486 53.5 41.0 47.2 0.4 1558 chr3L 15810913 intron fwe - chr3L 15811692 intron fwe - chr3L 15812471 intron fwe - chr3L_17_15810001 chr3L_15810001 RAL-849 2655 chr3L 15833806 15833877 chr3L 15833995 15834066 29 189 40.5 45.5 43.0 0.7 260 chr3L 15833806 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833936 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834066 3` UTR CG18081 - chr3L_29_15830001 chr3L_15830001 RAL-849 2656 chr3L 15834943 15835011 chr3L 15835148 15835216 24 201 11.5 8.5 10.0 2.2 273 chr3L 15834943 intron CG18081 - chr3L 15835080 intron CG18081 - chr3L 15835216 5` UTR CG18081 - chr3L_24_15835001 chr3L_15835001 RAL-849 2657 chr3L 15840386 15840467 chr3L 15840524 15840568 13 129 5.0 7.0 6.0 1.9 182 chr3L 15840386 intron CG32150 - chr3L 15840477 intron CG32150 - chr3L 15840568 intron CG32150 - chr3L_13_15840001 chr3L_15840001 RAL-849 2658 chr3L 15871542 15871608 chr3L 15871676 15871742 23 134 7.0 9.5 8.2 2.5 200 chr3L 15871542 intron pHCl - chr3L 15871642 intron pHCl - chr3L 15871742 intron pHCl - chr3L_23_15870001 chr3L_15870001 RAL-849 2659 chr3L 15883149 15883210 chr3L 15883492 15883553 22 342 6.0 3.5 4.8 3.8 404 chr3L 15883149 intron pHCl - chr3L 15883351 intron pHCl - chr3L 15883553 intron pHCl - chr3L_22_15880001 chr3L_15880001 RAL-849 2660 chr3L 15899192 15899206 chr3L 15899807 15899808 jockey 5 611 14.0 6.0 10.0 0.5 616 chr3L 15899192 intergenic pHCl - chr3L 15899500 intergenic pHCl - chr3L 15899808 intergenic sff - chr3L_5_15895001 chr3L_15895001 RAL-849 2661 chr3L 15899221 15899257 chr3L 15899794 15899828 jockey 6 598 2.5 5.5 4.0 1.2 607 chr3L 15899221 intergenic pHCl - chr3L 15899524 intergenic pHCl - chr3L 15899828 intergenic sff - chr3L_6_15895001 chr3L_15895001 RAL-849 2662 chr3L 15929148 15929220 chr3L 15938341 15938417 roo 13 9194 2.0 5.5 3.8 2.7 9269 chr3L 15929148 intron Pka-C3 - chr3L 15933782 intron Pka-C3 - chr3L 15938417 intron Pka-C3 - chr3L_13_15930001 chr3L_15930001 RAL-849 2663 chr3L 15981632 15981707 chr3L 15981768 15981843 14 137 11.0 8.5 9.8 1.3 211 chr3L 15981632 intron,3` UTR brm -,CG17027 + chr3L 15981738 intron,3` UTR brm -,CG17027 + chr3L 15981843 intron,3` UTR brm -,CG17027 + chr3L_14_15980001 chr3L_15980001 RAL-849 2664 chr3L 15989189 15989217 chr3L 15989322 15989350 12 131 13.0 10.5 11.8 0.9 161 chr3L 15989189 intron Hip14 + chr3L 15989270 intron Hip14 + chr3L 15989350 intron Hip14 + chr3L_12_15985001 chr3L_15985001 RAL-849 2665 chr3L 15992163 15992223 chr3L 15992329 15992354 27 163 7.5 4.5 6.0 3.9 191 chr3L 15992163 3` UTR Hip14 + chr3L 15992258 3` UTR Hip14 + chr3L 15992354 3` UTR Hip14 + chr3L_27_15990001 chr3L_15990001 RAL-849 2666 chr3L 16060441 16060504 chr3L 16060630 16060693 18 187 7.5 8.0 7.8 2.0 252 chr3L 16060441 intron Mbs + chr3L 16060567 intron Mbs + chr3L 16060693 intron Mbs + chr3L_18_16060001 chr3L_16060001 RAL-849 2667 chr3L 16070692 16070762 chr3L 16070819 16070889 23 127 6.5 7.5 7.0 2.9 197 chr3L 16070692 intron Mbs + chr3L 16070790 intron Mbs + chr3L 16070889 exon Mbs + chr3L_23_16070001 chr3L_16070001 RAL-849 2668 chr3L 16162585 16162621 chr3L 16162719 16162755 17 134 9.5 10.5 10.0 1.5 170 chr3L 16162585 intron CG5151 - chr3L 16162670 intron CG5151 - chr3L 16162755 intron CG5151 - chr3L_17_16160001 chr3L_16160001 RAL-849 2669 chr3L 16175476 16175522 chr3L 16175629 16175659 14 154 8.5 5.0 6.8 1.8 183 chr3L 16175476 intergenic not near genes chr3L 16175568 intergenic not near genes chr3L 16175659 intergenic not near genes chr3L_14_16175001 chr3L_16175001 RAL-849 2670 chr3L 16175525 16175536 chr3L 16175624 16175698 7 153 6.5 4.0 5.2 1.1 173 chr3L 16175525 intergenic not near genes chr3L 16175612 intergenic not near genes chr3L 16175698 intergenic not near genes chr3L_7_16175001 chr3L_16175001 RAL-849 2671 chr3L 16184059 16184129 chr3L 16188928 16188998 X-element 22 4869 3.0 7.0 5.0 3.7 4939 chr3L 16184059 intergenic not near genes chr3L 16186528 intergenic not near genes chr3L 16188998 intergenic not near genes chr3L_22_16185001 chr3L_16185001 RAL-849 2672 chr3L 16192305 16192357 chr3L 16192433 16192486 12 129 2.5 13.0 7.8 1.4 181 chr3L 16192305 intergenic not near genes chr3L 16192396 intergenic not near genes chr3L 16192486 intergenic not near genes chr3L_12_16190001 chr3L_16190001 RAL-849 2673 chr3L 16194285 16194366 chr3L 16194425 16194476 23 133 5.0 6.0 5.5 3.5 191 chr3L 16194285 intergenic not near genes chr3L 16194380 intergenic not near genes chr3L 16194476 intergenic not near genes chr3L_23_16190001 chr3L_16190001 RAL-849 2674 chr3L 16212765 16212838 chr3L 16212906 16212979 15 141 6.5 0.0 3.2 3.6 214 chr3L 16212765 intergenic CG13073 - chr3L 16212872 intergenic CG13073 - chr3L 16212979 intergenic CG13073 - chr3L_15_16210001 chr3L_16210001 RAL-849 2675 chr3L 16236303 16236342 chr3L 16236456 16236495 11 149 6.0 5.5 5.8 1.6 192 chr3L 16236303 3` UTR l(3)72Dp + chr3L 16236399 3` UTR l(3)72Dp + chr3L 16236495 3` UTR l(3)72Dp + chr3L_11_16235001 chr3L_16235001 RAL-849 2676 chr3L 16240707 16240775 chr3L 16240889 16240957 5 182 0.0 6.0 3.0 1.2 250 chr3L 16240707 intergenic not near genes chr3L 16240832 intergenic not near genes chr3L 16240957 intergenic not near genes chr3L_5_16240001 chr3L_16240001 RAL-849 2677 chr3L 16241890 16241917 chr3L 16242024 16242051 7 134 6.5 13.0 9.8 0.6 161 chr3L 16241890 intergenic not near genes chr3L 16241970 intergenic not near genes chr3L 16242051 intergenic not near genes chr3L_7_16240001 chr3L_16240001 RAL-849 2678 chr3L 16260266 16260298 chr3L 16260396 16260428 4 130 4.5 3.5 4.0 0.8 162 chr3L 16260266 intergenic not near genes chr3L 16260347 intergenic not near genes chr3L 16260428 intergenic not near genes chr3L_4_16260001 chr3L_16260001 RAL-849 2679 chr3L 16279038 16279105 chr3L 16279172 16279236 10 132 1.0 7.0 4.0 2.0 198 chr3L 16279038 exon CG13050 - chr3L 16279137 intron CG13050 - chr3L 16279236 5` UTR CG13050 - chr3L_10_16275001 chr3L_16275001 RAL-849 2680 chr3L 16359905 16360003 chr3L 16360225 16360306 22 318 0.0 5.5 2.8 5.8 401 chr3L 16359905 intron CG45057 - chr3L 16360106 intron CG45057 - chr3L 16360306 intron CG45057 - chr3L_22_16360001 chr3L_16360001 RAL-849 2681 chr3L 16387963 16388013 chr3L 16388074 16388144 17 125 7.0 9.0 8.0 1.9 181 chr3L 16387963 exon RAF2 + chr3L 16388054 exon RAF2 + chr3L 16388144 exon RAF2 + chr3L_17_16385001 chr3L_16385001 RAL-849 2682 chr3L 16431789 16431855 chr3L 16431933 16432000 5 144 5.0 3.0 4.0 1.0 211 chr3L 16431789 intron,intron CG33158 +,dsx-c73A - chr3L 16431894 intron,intron CG33158 +,dsx-c73A - chr3L 16432000 intron,intron CG33158 +,dsx-c73A - chr3L_5_16430001 chr3L_16430001 RAL-849 2683 chr3L 16437041 16437069 chr3L 16437177 16437205 7 136 9.5 8.0 8.8 0.7 164 chr3L 16437041 intron,intron CG33158 +,dsx-c73A - chr3L 16437123 intron,intron CG33158 +,dsx-c73A - chr3L 16437205 intron,intron CG33158 +,dsx-c73A - chr3L_7_16435001 chr3L_16435001 RAL-849 2684 chr3L 16443796 16443876 chr3L 16446188 16446266 Doc 23 2390 6.0 4.5 5.2 3.7 2470 chr3L 16443796 intron,intron CG33158 +,dsx-c73A - chr3L 16445031 intron,intron CG33158 +,dsx-c73A - chr3L 16446266 intron,intron CG33158 +,dsx-c73A - chr3L_23_16445001 chr3L_16445001 RAL-849 2685 chr3L 16462688 16462750 chr3L 16462832 16462894 19 144 6.5 10.0 8.2 2.1 206 chr3L 16462688 intron CG33158 + chr3L 16462791 intron CG33158 + chr3L 16462894 intron CG33158 + chr3L_19_16460001 chr3L_16460001 RAL-849 2686 chr3L 16493944 16494005 chr3L 16494501 16494563 jockey 14 564 12.5 11.0 11.8 1.1 619 chr3L 16493944 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494254 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494563 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_14_16490001 chr3L_16490001 RAL-849 2687 chr3L 16503601 16503626 chr3L 16503723 16503728 6 122 10.5 9.0 9.8 0.6 127 chr3L 16503601 intron CG43373 - chr3L 16503664 intron CG43373 - chr3L 16503728 intron CG43373 - chr3L_6_16500001 chr3L_16500001 RAL-849 2688 chr3L 16503631 16503644 chr3L 16503721 16503771 8 116 7.0 8.0 7.5 0.9 140 chr3L 16503631 intron CG43373 - chr3L 16503701 intron CG43373 - chr3L 16503771 intron CG43373 - chr3L_8_16500001 chr3L_16500001 RAL-849 2689 chr3L 10695510 10695512 chr3L 16523002 16523004 5 5827492 19.0 21.5 20.2 0.2 5827494 chr3L 10695510 intron NijA - chr3L 13609257 intron bru-3 - chr3L 16523004 intron CG43373 - chr3L_5_13605001 chr3L_13605001 RAL-849 2690 chr3L 16533514 16533586 chr3L 16533675 16533747 21 161 0.0 2.0 1.0 10.5 233 chr3L 16533514 intron CG43373 - chr3L 16533630 intron CG43373 - chr3L 16533747 intron CG43373 - chr3L_21_16530001 chr3L_16530001 RAL-849 2691 chr3L 16537822 16537873 chr3L 16537959 16538010 19 137 7.0 17.0 12.0 1.5 188 chr3L 16537822 intron CG43373 - chr3L 16537916 intron CG43373 - chr3L 16538010 intron CG43373 - chr3L_19_16535001 chr3L_16535001 RAL-849 2692 chr3L 16540025 16540076 chr3L 16540163 16540214 18 138 7.0 12.0 9.5 1.7 189 chr3L 16540025 intron CG43373 - chr3L 16540120 intron CG43373 - chr3L 16540214 intron CG43373 - chr3L_18_16540001 chr3L_16540001 RAL-849 2693 chr3L 16616468 16616535 chr3L 16621846 16621913 297 16 5378 8.5 8.5 8.5 1.7 5445 chr3L 16616468 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621913 3` UTR Abl - chr3L_16_16615001 chr3L_16615001 RAL-849 2694 chr3L 16683987 16684038 chr3L 16689258 16689309 copia 7 5271 0.5 5.5 3.0 1.8 5322 chr3L 16683987 intron,intron Lasp -,CG43954 - chr3L 16686648 intron,intron Lasp -,CG43954 - chr3L 16689309 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_7_16685001 chr3L_16685001 RAL-849 2695 chr3L 16699961 16700009 chr3L 16700106 16700154 24 145 5.5 0.5 3.0 6.0 193 chr3L 16699961 intron,intron Lasp -,CG43954 - chr3L 16700058 intron,intron Lasp -,CG43954 - chr3L 16700154 intron,intron Lasp -,CG43954 - chr3L_24_16700001 chr3L_16700001 RAL-849 2696 chr3L 16714812 16714865 chr3L 16714946 16714999 19 133 4.5 8.5 6.5 2.5 187 chr3L 16714812 intron Dab + chr3L 16714906 intron Dab + chr3L 16714999 intron Dab + chr3L_19_16710001 chr3L_16710001 RAL-849 2697 chr3L 16760796 16760880 chr3L 16760986 16761035 24 184 2.5 8.5 5.5 3.7 239 chr3L 16760796 intergenic not near genes chr3L 16760916 intergenic not near genes chr3L 16761035 intergenic not near genes chr3L_24_16760001 chr3L_16760001 RAL-849 2698 chr3L 16807995 16808060 chr3L 16808121 16808189 13 127 6.0 5.0 5.5 2.0 194 chr3L 16807995 intron nudC + chr3L 16808092 intron nudC + chr3L 16808189 intron nudC + chr3L_13_16805001 chr3L_16805001 RAL-849 2699 chr3L 16817827 16817903 chr3L 16818017 16818053 28 186 4.0 3.5 3.8 5.8 226 chr3L 16817827 intron,intron nudC +,CG13024 - chr3L 16817940 intron,intron nudC +,CG13024 - chr3L 16818053 intron,intron nudC +,CG13024 - chr3L_28_16815001 chr3L_16815001 RAL-849 2700 chr3L 16818701 16818773 chr3L 16818827 16818899 36 126 9.5 9.0 9.2 3.5 198 chr3L 16818701 intron,intron nudC +,CG13024 - chr3L 16818800 intron,intron nudC +,CG13024 - chr3L 16818899 intron,intron nudC +,CG13024 - chr3L_36_16815001 chr3L_16815001 RAL-849 2701 chr3L 16821248 16821277 chr3L 16821384 16821398 8 132 15.0 6.5 10.8 0.7 150 chr3L 16821248 intron CG13024 - chr3L 16821323 intron CG13024 - chr3L 16821398 intron CG13024 - chr3L_8_16820001 chr3L_16820001 RAL-849 2702 chr3L 16844975 16845041 chr3L 16845138 16845204 14 163 5.0 5.5 5.2 2.3 229 chr3L 16844975 5` UTR CG9669 - chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845204 intergenic CG9715 +,CG9669 - chr3L_14_16845001 chr3L_16845001 RAL-849 2703 chr3L 16866170 16866188 chr3L 16866311 16866329 6 141 13.0 3.0 8.0 0.7 159 chr3L 16866170 intron Lmpt + chr3L 16866250 intron Lmpt + chr3L 16866329 intron Lmpt + chr3L_6_16865001 chr3L_16865001 RAL-849 2704 chr3L 16866205 16866225 chr3L 16866345 16866365 6 140 7.0 7.0 7.0 0.8 160 chr3L 16866205 intron Lmpt + chr3L 16866285 intron Lmpt + chr3L 16866365 intron Lmpt + chr3L_6_16865001 chr3L_16865001 RAL-849 2705 chr3L 16867493 16867565 chr3L 16867621 16867693 15 128 5.0 6.5 5.8 2.2 200 chr3L 16867493 intron Lmpt + chr3L 16867593 intron Lmpt + chr3L 16867693 intron Lmpt + chr3L_15_16865001 chr3L_16865001 RAL-849 2706 chr3L 16869536 16869603 chr3L 16869664 16869736 25 132 5.5 7.0 6.2 3.5 200 chr3L 16869536 intron Lmpt + chr3L 16869636 intron Lmpt + chr3L 16869736 intron Lmpt + chr3L_25_16865001 chr3L_16865001 RAL-849 2707 chr3L 16870818 16870869 chr3L 16870960 16871010 11 142 4.5 0.0 2.2 3.4 192 chr3L 16870818 intron Lmpt + chr3L 16870914 intron Lmpt + chr3L 16871010 intron Lmpt + chr3L_11_16870001 chr3L_16870001 RAL-849 2708 chr3L 16873302 16873356 chr3L 16873457 16873511 30 155 9.0 11.0 10.0 2.7 209 chr3L 16873302 intron Lmpt + chr3L 16873406 intron Lmpt + chr3L 16873511 intron Lmpt + chr3L_30_16870001 chr3L_16870001 RAL-849 2709 chr3L 16875329 16875364 chr3L 16875525 16875560 8 196 3.0 2.0 2.5 2.3 231 chr3L 16875329 intron Lmpt + chr3L 16875444 intron Lmpt + chr3L 16875560 intron Lmpt + chr3L_8_16875001 chr3L_16875001 RAL-849 2710 chr3L 16941356 16941397 chr3L 16941507 16941548 14 151 12.0 4.0 8.0 1.6 192 chr3L 16941356 intron Cpr73D - chr3L 16941452 intron Cpr73D - chr3L 16941548 intron Cpr73D - chr3L_14_16940001 chr3L_16940001 RAL-849 2711 chr3L 16945688 16945759 chr3L 16954886 16954956 roo 24 9192 4.0 5.0 4.5 4.4 9268 chr3L 16945688 exon Obp73a + chr3L 16950322 intergenic not near genes chr3L 16954956 5` UTR Nc73EF + chr3L_24_16950001 chr3L_16950001 RAL-849 2712 chr3L 17024009 17024080 chr3L 17024140 17024211 26 131 6.0 7.0 6.5 3.5 202 chr3L 17024009 intergenic a10 -,Fit2 + chr3L 17024110 intergenic Fit2 +,a10 - chr3L 17024211 intergenic Fit2 +,a10 - chr3L_26_17020001 chr3L_17020001 RAL-849 2713 chr3L 17034908 17034945 chr3L 17035146 17035183 G2 7 238 5.0 13.5 9.2 0.7 275 chr3L 17034908 intergenic not near genes chr3L 17035046 intergenic not near genes chr3L 17035183 intergenic beg + chr3L_7_17035001 chr3L_17035001 RAL-849 2714 chr3L 17084961 17085025 chr3L 17094160 17094224 roo 25 9199 10.5 9.0 9.8 2.3 9263 chr3L 17084961 intron Rbp6 - chr3L 17089592 intron Rbp6 - chr3L 17094224 intron Rbp6 - chr3L_25_17085001 chr3L_17085001 RAL-849 2715 chr3L 17120603 17120677 chr3L 17120729 17120803 38 126 9.0 9.5 9.2 3.7 200 chr3L 17120603 intron Rbp6 - chr3L 17120703 intron Rbp6 - chr3L 17120803 intron Rbp6 - chr3L_38_17120001 chr3L_17120001 RAL-849 2716 chr3L 17149117 17149129 chr3L 17149248 17149260 5 131 18.5 1.0 9.8 0.5 143 chr3L 17149117 intron Rbp6 - chr3L 17149188 intron Rbp6 - chr3L 17149260 intron Rbp6 - chr3L_5_17145001 chr3L_17145001 RAL-849 2717 chr3L 17195459 17195487 chr3L 17195850 17195869 16 388 14.5 11.0 12.8 1.2 410 chr3L 17195459 intron Rbp6 - chr3L 17195664 intron Rbp6 - chr3L 17195869 intron Rbp6 - chr3L_16_17195001 chr3L_17195001 RAL-849 2718 chr3L 17195488 17195532 chr3L 17195846 17195891 23 380 6.5 9.5 8.0 2.6 403 chr3L 17195488 intron Rbp6 - chr3L 17195690 intron Rbp6 - chr3L 17195891 intron Rbp6 - chr3L_23_17195001 chr3L_17195001 RAL-849 2719 chr3L 17272217 17272253 chr3L 17272378 17272436 4 178 7.0 7.5 7.2 0.5 219 chr3L 17272217 intergenic not near genes chr3L 17272326 intergenic not near genes chr3L 17272436 intergenic not near genes chr3L_4_17270001 chr3L_17270001 RAL-849 2720 chr3L 17295195 17295235 chr3L 17295317 17295356 4 121 16.0 13.5 14.8 0.3 161 chr3L 17295195 intergenic not near genes chr3L 17295276 intergenic not near genes chr3L 17295356 intergenic not near genes chr3L_4_17295001 chr3L_17295001 RAL-849 2721 chr3L 17316408 17316479 chr3L 17316569 17316570 18 156 4.0 8.5 6.2 2.5 162 chr3L 17316408 intergenic not near genes chr3L 17316489 intergenic not near genes chr3L 17316570 intergenic not near genes chr3L_18_17315001 chr3L_17315001 RAL-849 2722 chr3L 17357992 17358053 chr3L 17358147 17358208 29 155 8.0 4.0 6.0 4.1 216 chr3L 17357992 3` UTR CG7692 + chr3L 17358100 intergenic CG7692 + chr3L 17358208 intergenic CG7692 + chr3L_29_17355001 chr3L_17355001 RAL-849 2723 chr3L 17367385 17367457 chr3L 17367529 17367604 25 145 5.0 7.5 6.2 3.5 219 chr3L 17367385 intergenic CR45688 +,Cad74A - chr3L 17367494 intergenic CR45688 +,Cad74A - chr3L 17367604 intergenic Cad74A -,CR45688 + chr3L_25_17365001 chr3L_17365001 RAL-849 2724 chr3L 17461969 17461996 chr3L 17462164 17462191 8 195 3.0 6.5 4.8 1.4 222 chr3L 17461969 intergenic not near genes chr3L 17462080 intergenic not near genes chr3L 17462191 intergenic not near genes chr3L_8_17460001 chr3L_17460001 RAL-849 2725 chr3L 17492432 17492507 chr3L 17492791 17492866 45 358 8.5 12.0 10.2 4.0 434 chr3L 17492432 intron Oatp74D + chr3L 17492649 intron Oatp74D + chr3L 17492866 intron Oatp74D + chr3L_45_17490001 chr3L_17490001 RAL-849 2726 chr3L 17491140 17491212 chr3L 17493013 17493085 12 1875 18.0 34.0 26.0 0.4 1945 chr3L 17491140 intron Oatp74D + chr3L 17492112 intron Oatp74D + chr3L 17493085 intron Oatp74D + chr3L_12_17490001 chr3L_17490001 RAL-849 2727 chr3L 17516937 17516990 chr3L 17524545 17524598 412 17 7607 11.0 6.5 8.8 1.7 7661 chr3L 17516937 intron CG7564 + chr3L 17520768 intron CG7564 + chr3L 17524598 3` UTR CG7564 + chr3L_17_17520001 chr3L_17520001 RAL-849 2728 chr3L 17516992 17517009 chr3L 17524538 17524541 412 5 7579 10.0 6.5 8.2 0.5 7549 chr3L 17516992 intron CG7564 + chr3L 17520766 intron CG7564 + chr3L 17524541 3` UTR CG7564 + chr3L_5_17520001 chr3L_17520001 RAL-849 2729 chr3L 17586928 17586997 chr3L 17587112 17587181 18 182 5.5 5.0 5.2 2.9 253 chr3L 17586928 intron Eip74EF - chr3L 17587054 intron Eip74EF - chr3L 17587181 intron Eip74EF - chr3L_18_17585001 chr3L_17585001 RAL-849 2730 chr3L 17592963 17593033 chr3L 17593315 17593369 8 353 1.5 5.5 3.5 1.8 406 chr3L 17592963 intron Eip74EF - chr3L 17593166 intron Eip74EF - chr3L 17593369 intron Eip74EF - chr3L_8_17590001 chr3L_17590001 RAL-849 2731 chr3L 17632684 17632738 chr3L 17632847 17632901 19 163 4.0 3.5 3.8 4.0 217 chr3L 17632684 intergenic CR44567 -,CR44566 + chr3L 17632792 intergenic CR44567 - chr3L 17632901 intergenic CR44567 - chr3L_19_17630001 chr3L_17630001 RAL-849 2732 chr3L 17636056 17636123 chr3L 17636254 17636321 23 197 5.0 9.5 7.2 2.8 265 chr3L 17636056 intron CG7497 + chr3L 17636188 intron CG7497 + chr3L 17636321 exon CG7497 + chr3L_23_17635001 chr3L_17635001 RAL-849 2733 chr3L 17690801 17690838 chr3L 17690931 17690968 10 130 5.5 4.0 4.8 1.7 167 chr3L 17690801 intron Ccn + chr3L 17690884 intron Ccn + chr3L 17690968 intron Ccn + chr3L_10_17690001 chr3L_17690001 RAL-849 2734 chr3L 17730808 17730872 chr3L 17738188 17738252 mdg1 20 7380 8.0 6.0 7.0 2.5 7444 chr3L 17730808 intron Ccn + chr3L 17734530 intron Ccn + chr3L 17738252 intron Ccn + chr3L_20_17730001 chr3L_17730001 RAL-849 2735 chr3L 17789802 17789869 chr3L 17789928 17789995 5 126 5.0 6.5 5.8 0.7 193 chr3L 17789802 intergenic not near genes chr3L 17789898 intergenic not near genes chr3L 17789995 intergenic not near genes chr3L_5_17785001 chr3L_17785001 RAL-849 2736 chr3L 17790413 17790427 chr3L 17790604 17790618 4 191 22.0 0.5 11.2 0.3 205 chr3L 17790413 intergenic not near genes chr3L 17790516 intergenic not near genes chr3L 17790618 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 RAL-849 2737 chr3L 17790430 17790487 chr3L 17790599 17790890 16 226 8.5 0.5 4.5 2.9 460 chr3L 17790430 intergenic not near genes chr3L 17790660 intergenic CG42815 - chr3L 17790890 intergenic CG42815 - chr3L_16_17790001 chr3L_17790001 RAL-849 2738 chr3L 17790594 17790636 chr3L 17790909 17790951 8 315 0.5 13.5 7.0 1.0 357 chr3L 17790594 intergenic CG42815 - chr3L 17790772 intergenic CG42815 - chr3L 17790951 intergenic CG42815 - chr3L_8_17790001 chr3L_17790001 RAL-849 2739 chr3L 17791892 17791921 chr3L 17792019 17792048 11 127 4.5 4.5 4.5 2.0 156 chr3L 17791892 intergenic CG42816 -,CG42815 - chr3L 17791970 intergenic CG42816 -,CG42815 - chr3L 17792048 intergenic CG42816 - chr3L_11_17790001 chr3L_17790001 RAL-849 2740 chr3L 17799769 17799837 chr3L 17801606 17801674 S-element 31 1837 4.5 8.5 6.5 4.1 1905 chr3L 17799769 intron NUCB1 - chr3L 17800722 intron NUCB1 - chr3L 17801674 intron NUCB1 - chr3L_31_17800001 chr3L_17800001 RAL-849 2741 chr3L 17884644 17884685 chr3L 17884794 17884835 13 150 6.5 6.5 6.5 1.7 191 chr3L 17884644 intergenic CG5506 - chr3L 17884740 intergenic CG5506 - chr3L 17884835 intergenic CG5506 - chr3L_13_17880001 chr3L_17880001 RAL-849 2742 chr3L 17888965 17889005 chr3L 17889100 17889140 16 135 13.5 10.0 11.8 1.2 175 chr3L 17888965 intron CG7402 + chr3L 17889052 intron CG7402 + chr3L 17889140 intron CG7402 + chr3L_16_17885001 chr3L_17885001 RAL-849 2743 chr3L 17889010 17889030 chr3L 17889093 17889133 7 123 8.0 8.5 8.2 0.8 123 chr3L 17889010 intron CG7402 + chr3L 17889072 intron CG7402 + chr3L 17889133 intron CG7402 + chr3L_7_17885001 chr3L_17885001 RAL-849 2744 chr3L 17918338 17918395 chr3L 17921191 17921215 opus 5 2846 6.0 7.5 6.8 0.6 2877 chr3L 17918338 intergenic not near genes chr3L 17919776 intergenic not near genes chr3L 17921215 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-849 2745 chr3L 17991539 17991584 chr3L 17991667 17991712 19 127 8.5 11.0 9.8 1.8 173 chr3L 17991539 intron Eip75B - chr3L 17991626 intron Eip75B - chr3L 17991712 intron Eip75B - chr3L_19_17990001 chr3L_17990001 RAL-849 2746 chr3L 18029914 18029936 chr3L 18030041 18030063 12 127 13.0 0.0 6.5 1.6 149 chr3L 18029914 intron Eip75B - chr3L 18029988 intron Eip75B - chr3L 18030063 intron Eip75B - chr3L_12_18025001 chr3L_18025001 RAL-849 2747 chr3L 18047662 18047722 chr3L 18056769 18056829 roo 13 9107 4.5 8.0 6.2 1.8 9167 chr3L 18047662 intron Eip75B - chr3L 18052246 intron Eip75B - chr3L 18056829 intron Eip75B - chr3L_13_18050001 chr3L_18050001 RAL-849 2748 chr3L 18047729 18047734 chr3L 18056768 18056841 roo 5 9093 4.5 8.0 6.2 0.7 9112 chr3L 18047729 intron Eip75B - chr3L 18052285 intron Eip75B - chr3L 18056841 intron Eip75B - chr3L_5_18050001 chr3L_18050001 RAL-849 2749 chr3L 18064012 18064068 chr3L 18064148 18064204 19 135 3.5 4.0 3.8 4.0 192 chr3L 18064012 intron Eip75B - chr3L 18064108 intron Eip75B - chr3L 18064204 intron Eip75B - chr3L_19_18060001 chr3L_18060001 RAL-849 2750 chr3L 18077105 18077157 chr3L 18077250 18077304 22 144 7.0 6.5 6.8 2.8 199 chr3L 18077105 intergenic CR45392 + chr3L 18077204 intergenic CR45392 + chr3L 18077304 intergenic CR45392 + chr3L_22_18075001 chr3L_18075001 RAL-849 2751 chr3L 18092732 18092761 chr3L 18092897 18092926 14 165 10.0 0.0 5.0 2.3 194 chr3L 18092732 intron CG13698 - chr3L 18092829 intron CG13698 - chr3L 18092926 intron CG13698 - chr3L_14_18090001 chr3L_18090001 RAL-849 2752 chr3L 18096871 18096889 chr3L 18096998 18097016 4 127 3.0 3.5 3.2 1.0 145 chr3L 18096871 intron CG13698 - chr3L 18096944 intron CG13698 - chr3L 18097016 intron CG13698 - chr3L_4_18095001 chr3L_18095001 RAL-849 2753 chr3L 18113273 18113282 chr3L 18113420 18113429 4 147 6.0 16.0 11.0 0.3 156 chr3L 18113273 intron,intron CG32195 +,CG7341 + chr3L 18113351 intron,intron CG32195 +,CG7341 + chr3L 18113429 intron,intron CG32195 +,CG7341 + chr3L_4_18110001 chr3L_18110001 RAL-849 2754 chr3L 18119592 18119669 chr3L 18119754 18119817 16 159 0.0 9.5 4.8 2.8 225 chr3L 18119592 intron CG7341 + chr3L 18119704 intron CG7341 + chr3L 18119817 exon CG7341 + chr3L_16_18115001 chr3L_18115001 RAL-849 2755 chr3L 18124374 18124422 chr3L 18124508 18124556 13 134 8.5 4.5 6.5 1.7 182 chr3L 18124374 intergenic not near genes chr3L 18124465 intergenic not near genes chr3L 18124556 intergenic not near genes chr3L_13_18120001 chr3L_18120001 RAL-849 2756 chr3L 18150281 18150332 chr3L 18150428 18150479 16 147 4.0 5.5 4.8 2.8 198 chr3L 18150281 intron CG7330 + chr3L 18150380 intron CG7330 + chr3L 18150479 intron CG7330 + chr3L_16_18150001 chr3L_18150001 RAL-849 2757 chr3L 18152681 18152750 chr3L 18152842 18152910 14 161 7.0 5.5 6.2 1.9 229 chr3L 18152681 intron CG7330 + chr3L 18152796 intron CG7330 + chr3L 18152910 intron CG7330 + chr3L_14_18150001 chr3L_18150001 RAL-849 2758 chr3L 18172642 18172699 chr3L 18172768 18172825 21 126 16.5 5.5 11.0 1.8 183 chr3L 18172642 intron W - chr3L 18172734 intron W - chr3L 18172825 intron W - chr3L_21_18170001 chr3L_18170001 RAL-849 2759 chr3L 18186586 18186617 chr3L 18186775 18186806 9 189 12.5 10.0 11.2 0.7 220 chr3L 18186586 intergenic not near genes chr3L 18186696 intergenic not near genes chr3L 18186806 intergenic not near genes chr3L_9_18185001 chr3L_18185001 RAL-849 2760 chr3L 18198930 18198931 chr3L 24821493 24821494 4 6622563 25.0 20.0 22.5 0.2 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-849 2761 chr3L 18213994 18214005 chr3L 18214150 18214179 4 170 0.0 6.5 3.2 1.0 185 chr3L 18213994 intergenic not near genes chr3L 18214086 intergenic not near genes chr3L 18214179 intergenic not near genes chr3L_4_18210001 chr3L_18210001 RAL-849 2762 chr3L 18220196 18220224 chr3L 18220641 18220669 10 444 6.0 8.0 7.0 1.2 473 chr3L 18220196 intergenic not near genes chr3L 18220432 intergenic not near genes chr3L 18220669 intergenic not near genes chr3L_10_18220001 chr3L_18220001 RAL-849 2763 chr3L 18223117 18223189 chr3L 18223250 18223334 14 142 4.5 0.0 2.2 4.4 217 chr3L 18223117 intergenic not near genes chr3L 18223226 intergenic not near genes chr3L 18223334 intergenic not near genes chr3L_14_18220001 chr3L_18220001 RAL-849 2764 chr3L 18267812 18267985 chr3L 18267939 18268109 45 126 0.0 0.0 0.0 45.0 297 chr3L 18267812 intergenic not near genes chr3L 18267960 intergenic not near genes chr3L 18268109 intergenic not near genes chr3L_45_18265001 chr3L_18265001 RAL-849 2765 chr3L 18301301 18301379 chr3L 18301439 18301518 10 139 2.5 4.5 3.5 2.2 217 chr3L 18301301 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301518 intergenic CG13700 - chr3L_10_18300001 chr3L_18300001 RAL-849 2766 chr3L 18343504 18343524 chr3L 18343662 18343682 9 158 8.0 4.5 6.2 1.2 178 chr3L 18343504 intergenic not near genes chr3L 18343593 intergenic not near genes chr3L 18343682 intergenic not near genes chr3L_9_18340001 chr3L_18340001 RAL-849 2767 chr3L 18375926 18375985 chr3L 18376061 18376120 18 133 10.0 8.0 9.0 1.8 194 chr3L 18375926 intergenic not near genes chr3L 18376023 intergenic not near genes chr3L 18376120 intergenic not near genes chr3L_18_18375001 chr3L_18375001 RAL-849 2768 chr3L 18406083 18406124 chr3L 18406209 18406250 13 126 7.0 4.5 5.8 1.9 167 chr3L 18406083 intergenic not near genes chr3L 18406166 intergenic not near genes chr3L 18406250 intergenic not near genes chr3L_13_18405001 chr3L_18405001 RAL-849 2769 chr3L 18408686 18408754 chr3L 18408822 18408890 17 136 4.5 4.0 4.2 3.3 204 chr3L 18408686 intergenic not near genes chr3L 18408788 intergenic not near genes chr3L 18408890 intergenic not near genes chr3L_17_18405001 chr3L_18405001 RAL-849 2770 chr3L 9013690 9013693 chr3L 18417066 18417066 5 9403375 44.0 28.5 36.2 0.1 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-849 2771 chr3L 18436025 18436084 chr3L 18436173 18436232 18 148 6.0 6.0 6.0 2.6 207 chr3L 18436025 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436232 intergenic not near genes chr3L_18_18435001 chr3L_18435001 RAL-849 2772 chr3L 18445201 18445271 chr3L 18445329 18445379 18 126 0.0 2.0 1.0 9.0 178 chr3L 18445201 intergenic not near genes chr3L 18445290 intergenic not near genes chr3L 18445379 intergenic not near genes chr3L_18_18445001 chr3L_18445001 RAL-849 2773 chr3L 18448574 18448613 chr3L 18448716 18448755 8 142 4.5 4.0 4.2 1.5 181 chr3L 18448574 intergenic not near genes chr3L 18448664 intergenic not near genes chr3L 18448755 intergenic not near genes chr3L_8_18445001 chr3L_18445001 RAL-849 2774 chr3L 18456225 18456303 chr3L 18456363 18456441 19 137 5.5 6.5 6.0 2.7 216 chr3L 18456225 intergenic CR44670 - chr3L 18456333 intergenic CR44670 - chr3L 18456441 3` UTR CR44670 - chr3L_19_18455001 chr3L_18455001 RAL-849 2775 chr3L 18506096 18506110 chr3L 18509609 18509623 F-element 6 3513 13.0 7.5 10.2 0.5 3527 chr3L 18506096 intergenic not near genes chr3L 18507860 intergenic not near genes chr3L 18509623 intergenic not near genes chr3L_6_18505001 chr3L_18505001 RAL-849 2776 chr3L 18506116 18506157 chr3L 18509608 18509670 F-element 12 3511 4.0 7.5 5.8 1.8 3554 chr3L 18506116 intergenic not near genes chr3L 18507893 intergenic not near genes chr3L 18509670 intergenic not near genes chr3L_12_18505001 chr3L_18505001 RAL-849 2777 chr3L 18528583 18528647 chr3L 18537794 18537858 roo 22 9211 11.0 7.0 9.0 2.2 9275 chr3L 18528583 intergenic not near genes chr3L 18533220 intergenic not near genes chr3L 18537858 intergenic not near genes chr3L_22_18530001 chr3L_18530001 RAL-849 2778 chr3L 18546653 18546730 chr3L 18546797 18546874 37 143 5.0 3.5 4.2 7.1 221 chr3L 18546653 intergenic not near genes chr3L 18546764 intergenic not near genes chr3L 18546874 intergenic not near genes chr3L_37_18545001 chr3L_18545001 RAL-849 2779 chr3L 18555059 18555080 chr3L 18555193 18555214 7 134 3.5 4.0 3.8 1.5 155 chr3L 18555059 intergenic not near genes chr3L 18555136 intergenic not near genes chr3L 18555214 intergenic not near genes chr3L_7_18555001 chr3L_18555001 RAL-849 2780 chr3L 18566980 18567050 chr3L 18567116 18567186 30 133 4.0 10.0 7.0 3.8 206 chr3L 18566980 intron AstC-R1 + chr3L 18567083 intron AstC-R1 + chr3L 18567186 intron AstC-R1 + chr3L_30_18565001 chr3L_18565001 RAL-849 2781 chr3L 18579534 18579546 chr3L 18579712 18579724 5 178 10.5 10.0 10.2 0.4 190 chr3L 18579534 intergenic not near genes chr3L 18579629 intergenic not near genes chr3L 18579724 intergenic not near genes chr3L_5_18575001 chr3L_18575001 RAL-849 2782 chr3L 18579547 18579560 chr3L 18579709 18579728 8 175 8.0 9.5 8.8 0.8 181 chr3L 18579547 intergenic not near genes chr3L 18579638 intergenic not near genes chr3L 18579728 intergenic not near genes chr3L_8_18575001 chr3L_18575001 RAL-849 2783 chr3L 18579561 18579597 chr3L 18579699 18579775 19 174 4.0 7.5 5.8 2.8 214 chr3L 18579561 intergenic not near genes chr3L 18579668 intergenic not near genes chr3L 18579775 intergenic not near genes chr3L_19_18575001 chr3L_18575001 RAL-849 2784 chr3L 18593903 18593980 chr3L 18595933 18596013 Doc 17 2031 4.0 4.0 4.0 3.4 2110 chr3L 18593903 intergenic term - chr3L 18594958 intergenic not near genes chr3L 18596013 intergenic CR45389 + chr3L_17_18590001 chr3L_18590001 RAL-849 2785 chr3L 18603163 18603180 chr3L 18603293 18603310 4 130 0.5 17.0 8.8 0.4 147 chr3L 18603163 intron,intron CG13380 -,CG4174 - chr3L 18603236 intron,intron CG13380 -,CG4174 - chr3L 18603310 intron,intron CG13380 -,CG4174 - chr3L_4_18600001 chr3L_18600001 RAL-849 2786 chr3L 18606706 18606777 chr3L 18606954 18607025 24 247 8.0 7.5 7.8 2.7 319 chr3L 18606706 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606866 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18607025 intron,intron,intron CG13380 -,CG4174 -,CG18233 + chr3L_24_18605001 chr3L_18605001 RAL-849 2787 chr3L 18607829 18607860 chr3L 18607974 18607989 13 143 7.5 5.0 6.2 1.8 160 chr3L 18607829 intron,intron,exon CG13380 -,CG4174 -,CG18231 + chr3L 18607909 intron,intron,intron CG13380 -,CG4174 -,CG18231 + chr3L 18607989 intron,intron,intron CG13380 -,CG4174 -,CG18231 + chr3L_13_18605001 chr3L_18605001 RAL-849 2788 chr3L 18638539 18638601 chr3L 18638683 18638745 21 144 8.0 7.5 7.8 2.4 206 chr3L 18638539 intron MYPT-75D + chr3L 18638642 intron MYPT-75D + chr3L 18638745 intron MYPT-75D + chr3L_21_18635001 chr3L_18635001 RAL-849 2789 chr3L 18656151 18656215 chr3L 18656276 18656318 24 131 9.5 11.0 10.2 2.1 167 chr3L 18656151 intron MYPT-75D + chr3L 18656234 intron MYPT-75D + chr3L 18656318 intron MYPT-75D + chr3L_24_18655001 chr3L_18655001 RAL-849 2790 chr3L 18688123 18688135 chr3L 18688274 18688286 10 149 38.0 31.0 34.5 0.3 163 chr3L 18688123 intergenic not near genes chr3L 18688204 intergenic not near genes chr3L 18688286 intergenic not near genes chr3L_10_18685001 chr3L_18685001 RAL-849 2791 chr3L 18688137 18688157 chr3L 18688267 18688292 11 144 29.0 27.5 28.2 0.4 155 chr3L 18688137 intergenic not near genes chr3L 18688214 intergenic not near genes chr3L 18688292 intergenic not near genes chr3L_11_18685001 chr3L_18685001 RAL-849 2792 chr3L 18679384 18679442 chr3L 18689088 18689146 15 9704 59.5 53.5 56.5 0.3 9762 chr3L 18679384 intergenic not near genes chr3L 18684265 3` UTR Cyp12c1 - chr3L 18689146 intergenic not near genes chr3L_15_18680001 chr3L_18680001 RAL-849 2793 chr3L 18710742 18710789 chr3L 18718742 18718789 Stalker2 19 8000 7.5 3.5 5.5 2.9 8047 chr3L 18710742 intergenic not near genes chr3L 18714766 intergenic not near genes chr3L 18718789 intergenic not near genes chr3L_19_18710001 chr3L_18710001 RAL-849 2794 chr3L 18721724 18721795 chr3L 18721865 18721936 19 141 3.5 5.0 4.2 3.7 212 chr3L 18721724 intergenic CG12477 - chr3L 18721830 intergenic CG12477 - chr3L 18721936 3` UTR CG12477 - chr3L_19_18720001 chr3L_18720001 RAL-849 2795 chr3L 18730328 18730404 chr3L 18730558 18730634 29 229 8.0 9.0 8.5 3.1 306 chr3L 18730328 intergenic not near genes chr3L 18730481 intergenic not near genes chr3L 18730634 intergenic not near genes chr3L_29_18730001 chr3L_18730001 RAL-849 2796 chr3L 18741949 18741964 chr3L 18742085 18742100 6 136 12.5 6.0 9.2 0.6 151 chr3L 18741949 intergenic not near genes chr3L 18742024 intergenic not near genes chr3L 18742100 intergenic not near genes chr3L_6_18740001 chr3L_18740001 RAL-849 2797 chr3L 18753502 18753561 chr3L 18753634 18753693 18 132 8.0 5.0 6.5 2.4 191 chr3L 18753502 intron ftz-f1 - chr3L 18753598 intron ftz-f1 - chr3L 18753693 intron ftz-f1 - chr3L_18_18750001 chr3L_18750001 RAL-849 2798 chr3L 18772365 18772430 chr3L 18781096 18781161 roo 20 8731 9.0 7.0 8.0 2.2 8796 chr3L 18772365 intron ftz-f1 - chr3L 18776763 intron ftz-f1 - chr3L 18781161 intron ftz-f1 - chr3L_20_18775001 chr3L_18775001 RAL-849 2799 chr3L 18784352 18784403 chr3L 18784491 18784542 14 139 5.5 12.0 8.8 1.4 190 chr3L 18784352 intron ftz-f1 - chr3L 18784447 intron ftz-f1 - chr3L 18784542 intron ftz-f1 - chr3L_14_18780001 chr3L_18780001 RAL-849 2800 chr3L 18797279 18797334 chr3L 18797413 18797468 17 134 3.5 11.0 7.2 2.1 189 chr3L 18797279 intron ftz-f1 - chr3L 18797374 intron ftz-f1 - chr3L 18797468 intron ftz-f1 - chr3L_17_18795001 chr3L_18795001 RAL-849 2801 chr3L 18831801 18831874 chr3L 18831937 18832010 24 128 3.0 5.5 4.2 4.6 209 chr3L 18831801 intron Indy - chr3L 18831906 intron Indy - chr3L 18832010 intron Indy - chr3L_24_18830001 chr3L_18830001 RAL-849 2802 chr3L 18843829 18843883 chr3L 18843977 18844031 10 148 6.5 7.5 7.0 1.2 202 chr3L 18843829 intron Indy - chr3L 18843930 intron Indy - chr3L 18844031 intron Indy - chr3L_10_18840001 chr3L_18840001 RAL-849 2803 chr3L 18853961 18854018 chr3L 18854112 18854169 14 151 7.5 2.0 4.8 2.4 208 chr3L 18853961 intergenic CR45387 + chr3L 18854065 intergenic CR45387 + chr3L 18854169 intergenic CR45387 + chr3L_14_18850001 chr3L_18850001 RAL-849 2804 chr3L 18878624 18878668 chr3L 18878756 18878800 13 132 11.5 9.0 10.2 1.2 176 chr3L 18878624 3` UTR CG3961 - chr3L 18878712 3` UTR CG3961 - chr3L 18878800 3` UTR CG3961 - chr3L_13_18875001 chr3L_18875001 RAL-849 2805 chr3L 18896761 18896788 chr3L 18896945 18896971 7 184 7.5 6.5 7.0 0.9 210 chr3L 18896761 intron CG3902 - chr3L 18896866 intron CG3902 - chr3L 18896971 intron CG3902 - chr3L_7_18895001 chr3L_18895001 RAL-849 2806 chr3L 18924433 18924507 chr3L 18924559 18924633 15 126 7.5 2.5 5.0 2.5 200 chr3L 18924433 intron CG32204 - chr3L 18924533 intron CG32204 - chr3L 18924633 intron CG32204 - chr3L_15_18920001 chr3L_18920001 RAL-849 2807 chr3L 18933583 18933650 chr3L 18933727 18933793 23 143 5.5 7.0 6.2 3.2 210 chr3L 18933583 intron CG32204 - chr3L 18933688 intron CG32204 - chr3L 18933793 intron CG32204 - chr3L_23_18930001 chr3L_18930001 RAL-849 2808 chr3L 18935788 18935859 chr3L 18935927 18935998 11 139 4.5 5.5 5.0 1.8 210 chr3L 18935788 intron CG32204 - chr3L 18935893 intron CG32204 - chr3L 18935998 intron CG32204 - chr3L_11_18935001 chr3L_18935001 RAL-849 2809 chr3L 18942805 18942876 chr3L 18942968 18943033 25 150 6.0 7.5 6.8 3.2 228 chr3L 18942805 intron CG32204 - chr3L 18942919 intron CG32204 - chr3L 18943033 intron CG32204 - chr3L_25_18940001 chr3L_18940001 RAL-849 2810 chr3L 18948861 18948897 chr3L 18949137 18949173 8 276 0.0 6.5 3.2 1.9 312 chr3L 18948861 intergenic not near genes chr3L 18949017 intergenic not near genes chr3L 18949173 intergenic not near genes chr3L_8_18945001 chr3L_18945001 RAL-849 2811 chr3L 18969551 18969620 chr3L 18969697 18969766 34 146 7.5 7.5 7.5 4.0 215 chr3L 18969551 intergenic not near genes chr3L 18969658 intergenic not near genes chr3L 18969766 intergenic not near genes chr3L_34_18965001 chr3L_18965001 RAL-849 2812 chr3L 19008806 19008850 chr3L 19009194 19009238 jockey 19 387 11.5 12.5 12.0 1.5 432 chr3L 19008806 intron nkd - chr3L 19009022 intron nkd - chr3L 19009238 intron nkd - chr3L_19_19005001 chr3L_19005001 RAL-849 2813 chr3L 19025899 19025956 chr3L 19026033 19026081 24 134 11.0 0.0 5.5 3.7 182 chr3L 19025899 intron nkd - chr3L 19025990 intron nkd - chr3L 19026081 intron nkd - chr3L_24_19025001 chr3L_19025001 RAL-849 2814 chr3L 19111316 19111361 chr3L 19111453 19111498 15 135 5.5 9.0 7.2 1.8 182 chr3L 19111316 intron CG14082 - chr3L 19111407 intron CG14082 - chr3L 19111498 intron CG14082 - chr3L_15_19110001 chr3L_19110001 RAL-849 2815 chr3L 19115604 19115658 chr3L 19115827 19115874 BS 19 227 13.0 9.0 11.0 1.6 270 chr3L 19115604 intron CG14082 - chr3L 19115739 intron CG14082 - chr3L 19115874 intron CG14082 - chr3L_19_19115001 chr3L_19115001 RAL-849 2816 chr3L 19117002 19117069 chr3L 19124495 19124566 mdg1 33 7495 8.0 7.0 7.5 3.9 7564 chr3L 19117002 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124566 intron CG14082 - chr3L_33_19120001 chr3L_19120001 RAL-849 2817 chr3L 19138514 19138583 chr3L 19138645 19138714 29 130 10.0 10.0 10.0 2.6 200 chr3L 19138514 intron CG14082 - chr3L 19138614 intron CG14082 - chr3L 19138714 intron CG14082 - chr3L_29_19135001 chr3L_19135001 RAL-849 2818 chr3L 19182335 19182416 chr3L 19182467 19182547 23 131 4.5 3.5 4.0 4.6 212 chr3L 19182335 intron fz2 - chr3L 19182441 intron fz2 - chr3L 19182547 intron fz2 - chr3L_23_19180001 chr3L_19180001 RAL-849 2819 chr3L 19186899 19186977 chr3L 19187045 19187123 24 146 5.0 4.0 4.5 4.4 224 chr3L 19186899 intron fz2 - chr3L 19187011 intron fz2 - chr3L 19187123 intron fz2 - chr3L_24_19185001 chr3L_19185001 RAL-849 2820 chr3L 19208030 19208080 chr3L 19209445 19209504 Doc 18 1422 4.0 7.5 5.8 2.6 1474 chr3L 19208030 intron fz2 - chr3L 19208767 intron fz2 - chr3L 19209504 intron fz2 - chr3L_18_19205001 chr3L_19205001 RAL-849 2821 chr3L 19220633 19220633 chr3L 22908066 22908067 42 3687433 43.0 39.5 41.2 1.0 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_42_21060001 chr3L_21060001 RAL-849 2822 chr3L 19220634 19220634 chr3L 22908066 22908067 37 3687432 43.0 39.5 41.2 0.9 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_37_21060001 chr3L_21060001 RAL-849 2823 chr3L 19220635 19220635 chr3L 22908066 22908067 9 3687431 43.0 39.5 41.2 0.2 3687432 chr3L 19220635 intron fz2 - chr3L 21064351 intron siz + chr3L 22908067 intergenic not near genes chr3L_9_21060001 chr3L_21060001 RAL-849 2824 chr3L 19220636 19220636 chr3L 22908066 22908067 16 3687430 41.5 39.5 40.5 0.4 3687431 chr3L 19220636 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_16_21060001 chr3L_21060001 RAL-849 2825 chr3L 19220637 19220637 chr3L 22908066 22908066 27 3687429 41.5 39.5 40.5 0.7 3687429 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908066 intergenic not near genes chr3L_27_21060001 chr3L_21060001 RAL-849 2826 chr3L 19253770 19253831 chr3L 19253897 19253958 14 127 8.0 10.0 9.0 1.4 188 chr3L 19253770 3` UTR mRpL21 - chr3L 19253864 3` UTR mRpL21 - chr3L 19253958 3` UTR mRpL21 - chr3L_14_19250001 chr3L_19250001 RAL-849 2827 chr3L 19262168 19262233 chr3L 19262300 19262365 24 132 8.5 8.5 8.5 2.5 197 chr3L 19262168 3` UTR Bet1 + chr3L 19262266 3` UTR,3` UTR Bet1 +,Max - chr3L 19262365 3` UTR,3` UTR Bet1 +,Max - chr3L_24_19260001 chr3L_19260001 RAL-849 2828 chr3L 19342719 19342775 chr3L 19342860 19342916 18 141 3.5 6.5 5.0 3.0 197 chr3L 19342719 3` UTR CG32206 - chr3L 19342818 3` UTR CG32206 - chr3L 19342916 3` UTR CG32206 - chr3L_18_19340001 chr3L_19340001 RAL-849 2829 chr3L 19396937 19397007 chr3L 19397078 19397148 26 141 6.5 6.0 6.2 3.6 211 chr3L 19396937 intron CG32206 - chr3L 19397042 intron CG32206 - chr3L 19397148 intron CG32206 - chr3L_26_19395001 chr3L_19395001 RAL-849 2830 chr3L 19398891 19398928 chr3L 19403658 19403695 F-element 15 4762 8.0 5.5 6.8 1.9 4804 chr3L 19398891 intron CG32206 - chr3L 19401293 intron CG32206 - chr3L 19403695 intron CG32206 - chr3L_15_19400001 chr3L_19400001 RAL-849 2831 chr3L 19417767 19417822 chr3L 19417890 19417952 17 127 6.5 5.5 6.0 2.4 185 chr3L 19417767 intergenic not near genes chr3L 19417860 intergenic not near genes chr3L 19417952 intergenic not near genes chr3L_17_19415001 chr3L_19415001 RAL-849 2832 chr3L 19434716 19434786 chr3L 19434845 19434915 22 128 12.0 6.5 9.2 2.2 199 chr3L 19434716 intergenic not near genes chr3L 19434816 intergenic not near genes chr3L 19434915 intergenic not near genes chr3L_22_19430001 chr3L_19430001 RAL-849 2833 chr3L 19439216 19439288 chr3L 19439364 19439433 13 147 2.0 5.0 3.5 2.9 217 chr3L 19439216 intergenic not near genes chr3L 19439324 intergenic not near genes chr3L 19439433 intergenic CR45732 - chr3L_13_19435001 chr3L_19435001 RAL-849 2834 chr3L 19481009 19481077 chr3L 19481141 19481209 22 131 7.5 9.5 8.5 2.3 200 chr3L 19481009 intergenic not near genes chr3L 19481109 intergenic not near genes chr3L 19481209 intergenic not near genes chr3L_22_19480001 chr3L_19480001 RAL-849 2835 chr3L 19488480 19488496 chr3L 19488612 19488628 4 132 22.0 10.5 16.2 0.2 148 chr3L 19488480 intergenic pncr009:3L -,CG32212 + chr3L 19488554 intergenic pncr009:3L -,CG32212 + chr3L 19488628 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 RAL-849 2836 chr3L 19554773 19554849 chr3L 19554918 19554993 17 142 4.5 8.0 6.2 2.4 220 chr3L 19554773 intergenic CG9300 + chr3L 19554883 intergenic CG9300 + chr3L 19554993 intergenic CG9300 + chr3L_17_19550001 chr3L_19550001 RAL-849 2837 chr3L 19669444 19669484 chr3L 19669582 19669588 7 129 16.5 6.0 11.2 0.6 144 chr3L 19669444 intergenic not near genes chr3L 19669516 intergenic not near genes chr3L 19669588 intergenic not near genes chr3L_7_19665001 chr3L_19665001 RAL-849 2838 chr3L 19669492 19669516 chr3L 19669579 19669656 5 129 8.5 5.0 6.8 0.6 164 chr3L 19669492 intergenic not near genes chr3L 19669574 intergenic not near genes chr3L 19669656 intergenic not near genes chr3L_5_19665001 chr3L_19665001 RAL-849 2839 chr3L 19673841 19673906 chr3L 19673972 19674037 25 131 7.5 6.5 7.0 3.1 196 chr3L 19673841 intergenic not near genes chr3L 19673939 intergenic not near genes chr3L 19674037 intergenic not near genes chr3L_25_19670001 chr3L_19670001 RAL-849 2840 chr3L 19779470 19779548 chr3L 19779616 19779617 28 138 6.5 11.0 8.8 2.9 147 chr3L 19779470 intron,intron CG42637 -,Gyc76C - chr3L 19779544 intron,intron CG42637 -,Gyc76C - chr3L 19779617 intron,intron CG42637 -,Gyc76C - chr3L_28_19775001 chr3L_19775001 RAL-849 2841 chr3L 19820249 19820317 chr3L 19827848 19827915 412 21 7599 5.5 4.5 5.0 3.5 7666 chr3L 19820249 intron Deaf1 + chr3L 19824082 intron Deaf1 + chr3L 19827915 intron Deaf1 + chr3L_21_19820001 chr3L_19820001 RAL-849 2842 chr3L 19848466 19848525 chr3L 19857706 19857755 roo 20 9238 11.0 11.0 11.0 1.7 9289 chr3L 19848466 intron Papss + chr3L 19853110 intron Papss + chr3L 19857755 intron Papss + chr3L_20_19850001 chr3L_19850001 RAL-849 2843 chr3L 19861776 19861838 chr3L 19863613 19863676 S-element 19 1834 4.5 2.5 3.5 4.2 1900 chr3L 19861776 5` UTR CR45433 + chr3L 19862726 intergenic not near genes chr3L 19863676 intergenic not near genes chr3L_19_19860001 chr3L_19860001 RAL-849 2844 chr3L 19932448 19932489 chr3L 19932909 19932950 16 461 17.0 5.5 11.2 1.3 502 chr3L 19932448 3` UTR RhoGDI + chr3L 19932699 3` UTR RhoGDI + chr3L 19932950 intergenic RhoGDI + chr3L_16_19930001 chr3L_19930001 RAL-849 2845 chr3L 19933487 19933562 chr3L 19934359 19934433 17 869 7.0 6.0 6.5 2.3 946 chr3L 19933487 intergenic CR45678 + chr3L 19933960 5` UTR CR45678 + chr3L 19934433 intergenic CR45678 + chr3L_17_19930001 chr3L_19930001 RAL-849 2846 chr3L 19961215 19961378 chr3L 19961342 19961508 34 125 0.0 0.5 0.2 28.3 293 chr3L 19961215 intron Ac76E + chr3L 19961362 intron Ac76E + chr3L 19961508 intron Ac76E + chr3L_34_19960001 chr3L_19960001 RAL-849 2847 chr3L 19981162 19981232 chr3L 19981292 19981362 24 130 4.5 7.0 5.8 3.5 200 chr3L 19981162 intergenic not near genes chr3L 19981262 intergenic CG17732 + chr3L 19981362 intergenic CG17732 + chr3L_24_19980001 chr3L_19980001 RAL-849 2848 chr3L 20061475 20061548 chr3L 20062184 20062257 32 706 8.5 9.5 9.0 3.2 782 chr3L 20061475 intron sNPF-R - chr3L 20061866 intron sNPF-R - chr3L 20062257 intron sNPF-R - chr3L_32_20060001 chr3L_20060001 RAL-849 2849 chr3L 20083396 20083420 chr3L 20083522 20083546 9 127 23.5 19.0 21.2 0.4 150 chr3L 20083396 intron sNPF-R - chr3L 20083471 intron sNPF-R - chr3L 20083546 intron sNPF-R - chr3L_9_20080001 chr3L_20080001 RAL-849 2850 chr3L 20086746 20086820 chr3L 20086874 20086957 17 131 6.0 5.5 5.8 2.5 211 chr3L 20086746 intron sNPF-R - chr3L 20086852 intron sNPF-R - chr3L 20086957 intron sNPF-R - chr3L_17_20085001 chr3L_20085001 RAL-849 2851 chr3L 20113435 20113495 chr3L 20113580 20113639 20 145 9.0 7.5 8.2 2.2 204 chr3L 20113435 intergenic not near genes chr3L 20113537 intergenic not near genes chr3L 20113639 intergenic not near genes chr3L_20_20110001 chr3L_20110001 RAL-849 2852 chr3L 20113613 20113679 chr3L 20122920 20122986 roo 21 9307 7.5 4.5 6.0 3.0 9373 chr3L 20113613 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122986 intergenic not near genes chr3L_21_20115001 chr3L_20115001 RAL-849 2853 chr3L 20157924 20157989 chr3L 20158072 20158137 30 148 10.5 6.5 8.5 3.2 213 chr3L 20157924 intron CG42674 - chr3L 20158030 intron CG42674 - chr3L 20158137 intron CG42674 - chr3L_30_20155001 chr3L_20155001 RAL-849 2854 chr3L 20212566 20212586 chr3L 20218193 20218213 mdg3 7 5627 11.0 7.0 9.0 0.7 5647 chr3L 20212566 intergenic CG7017 - chr3L 20215390 intergenic not near genes chr3L 20218213 intergenic CG6933 - chr3L_7_20215001 chr3L_20215001 RAL-849 2855 chr3L 20231039 20231106 chr3L 20231198 20231265 17 157 8.5 1.5 5.0 2.8 226 chr3L 20231039 intergenic not near genes chr3L 20231152 intergenic not near genes chr3L 20231265 intergenic CG13813 + chr3L_17_20230001 chr3L_20230001 RAL-849 2856 chr3L 20257293 20257356 chr3L 20258458 20258526 pogo 24 1170 11.0 5.5 8.2 2.6 1233 chr3L 20257293 intron rdgC + chr3L 20257910 intron rdgC + chr3L 20258526 intron rdgC + chr3L_24_20255001 chr3L_20255001 RAL-849 2857 chr3L 20525229 20525230 chr3L 22908066 22908067 10 2382837 15.5 39.5 27.5 0.4 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_10_21715001 chr3L_21715001 RAL-849 2858 chr3L 20536266 20536333 chr3L 20536397 20536464 26 131 8.0 13.0 10.5 2.3 198 chr3L 20536266 intron Rcd2 - chr3L 20536365 intron Rcd2 - chr3L 20536464 intron Rcd2 - chr3L_26_20535001 chr3L_20535001 RAL-849 2859 chr3L 20548317 20548382 chr3L 20548456 20548521 22 139 6.0 4.5 5.2 3.5 204 chr3L 20548317 intergenic not near genes chr3L 20548419 intergenic not near genes chr3L 20548521 intergenic not near genes chr3L_22_20545001 chr3L_20545001 RAL-849 2860 chr3L 20555381 20555422 chr3L 20555545 20555561 9 161 14.0 6.0 10.0 0.8 180 chr3L 20555381 intergenic not near genes chr3L 20555471 intergenic not near genes chr3L 20555561 intergenic not near genes chr3L_9_20555001 chr3L_20555001 RAL-849 2861 chr3L 20569973 20569987 chr3L 20570139 20570152 5 166 17.5 7.0 12.2 0.4 179 chr3L 20569973 intergenic not near genes chr3L 20570062 intergenic not near genes chr3L 20570152 intergenic not near genes chr3L_5_20570001 chr3L_20570001 RAL-849 2862 chr3L 20569994 20570000 chr3L 20570160 20570166 5 165 14.0 8.5 11.2 0.4 172 chr3L 20569994 intergenic not near genes chr3L 20570080 intergenic not near genes chr3L 20570166 intergenic not near genes chr3L_5_20570001 chr3L_20570001 RAL-849 2863 chr3L 20570005 20570021 chr3L 20570150 20570187 8 161 10.0 8.0 9.0 0.8 182 chr3L 20570005 intergenic not near genes chr3L 20570096 intergenic not near genes chr3L 20570187 intergenic not near genes chr3L_8_20570001 chr3L_20570001 RAL-849 2864 chr3L 20570022 20570040 chr3L 20570133 20570206 9 158 8.5 6.5 7.5 1.1 184 chr3L 20570022 intergenic not near genes chr3L 20570114 intergenic not near genes chr3L 20570206 intergenic not near genes chr3L_9_20570001 chr3L_20570001 RAL-849 2865 chr3L 20590022 20590087 chr3L 20590606 20590675 412 23 585 6.0 5.0 5.5 3.5 653 chr3L 20590022 intergenic not near genes chr3L 20590348 intergenic not near genes chr3L 20590675 intergenic not near genes chr3L_23_20590001 chr3L_20590001 RAL-849 2866 chr3L 20680891 20680953 chr3L 20681236 20681299 18 346 10.0 5.5 7.8 2.0 408 chr3L 20680891 intergenic not near genes chr3L 20681095 intergenic not near genes chr3L 20681299 intergenic not near genes chr3L_18_20680001 chr3L_20680001 RAL-849 2867 chr3L 20710720 20710793 chr3L 20710847 20710894 25 125 5.5 6.5 6.0 3.6 174 chr3L 20710720 intergenic not near genes chr3L 20710807 intergenic not near genes chr3L 20710894 intergenic not near genes chr3L_25_20710001 chr3L_20710001 RAL-849 2868 chr3L 20821246 20821301 chr3L 20824765 20824820 NOF 20 3518 11.5 7.5 9.5 1.9 3574 chr3L 20821246 intron Pka-R1 + chr3L 20823033 intron Pka-R1 + chr3L 20824820 intron Pka-R1 + chr3L_20_20820001 chr3L_20820001 RAL-849 2869 chr3L 20849227 20849290 chr3L 20849356 20849419 29 129 11.0 5.0 8.0 3.2 192 chr3L 20849227 intron CG32432 - chr3L 20849323 intron CG32432 - chr3L 20849419 intron CG32432 - chr3L_29_20845001 chr3L_20845001 RAL-849 2870 chr3L 20858026 20858094 chr3L 20858175 20858243 15 149 3.0 6.5 4.8 2.6 217 chr3L 20858026 intron CG32432 - chr3L 20858134 intron CG32432 - chr3L 20858243 intron CG32432 - chr3L_15_20855001 chr3L_20855001 RAL-849 2871 chr3L 20904311 20904381 chr3L 20904944 20905014 17 633 8.0 10.0 9.0 1.7 703 chr3L 20904311 intergenic not near genes chr3L 20904662 intergenic not near genes chr3L 20905014 intergenic not near genes chr3L_17_20900001 chr3L_20900001 RAL-849 2872 chr3L 20986895 20986938 chr3L 20987040 20987083 11 143 9.0 6.5 7.8 1.2 188 chr3L 20986895 intergenic not near genes chr3L 20986989 intergenic not near genes chr3L 20987083 intergenic not near genes chr3L_11_20985001 chr3L_20985001 RAL-849 2873 chr3L 21014871 21014897 chr3L 21023402 21023422 Tirant 8 8524 23.5 12.5 18.0 0.4 8551 chr3L 21014871 intron skd - chr3L 21019146 intron skd - chr3L 21023422 intron skd - chr3L_8_21015001 chr3L_21015001 RAL-849 2874 chr3L 21014899 21014947 chr3L 21023401 21023442 Tirant 25 8514 10.0 11.5 10.8 2.1 8543 chr3L 21014899 intron skd - chr3L 21019170 intron skd - chr3L 21023442 intron skd - chr3L_25_21015001 chr3L_21015001 RAL-849 2875 chr3L 21082161 21082231 chr3L 21082289 21082359 24 128 3.0 5.5 4.2 4.6 198 chr3L 21082161 intron ko - chr3L 21082260 intron ko - chr3L 21082359 intron ko - chr3L_24_21080001 chr3L_21080001 RAL-849 2876 chr3L 21087766 21087785 chr3L 21087932 21087946 7 164 21.5 10.0 15.8 0.4 180 chr3L 21087766 intron ko - chr3L 21087856 intron ko - chr3L 21087946 intron ko - chr3L_7_21085001 chr3L_21085001 RAL-849 2877 chr3L 21087789 21087797 chr3L 21087929 21087964 7 153 18.5 9.0 13.8 0.5 175 chr3L 21087789 intron ko - chr3L 21087876 intron ko - chr3L 21087964 intron ko - chr3L_7_21085001 chr3L_21085001 RAL-849 2878 chr3L 21087803 21087832 chr3L 21087927 21087999 14 161 10.5 8.5 9.5 1.3 196 chr3L 21087803 intron ko - chr3L 21087901 intron ko - chr3L 21087999 intron ko - chr3L_14_21085001 chr3L_21085001 RAL-849 2879 chr3L 21151823 21151891 chr3L 21156957 21157008 flea 26 5133 6.0 10.0 8.0 2.9 5185 chr3L 21151823 intron Ac78C - chr3L 21154416 intron Ac78C - chr3L 21157008 intron Ac78C - chr3L_26_21150001 chr3L_21150001 RAL-849 2880 chr3L 21243706 21243738 chr3L 21251314 21251318 412 4 7601 4.0 7.0 5.5 0.6 7612 chr3L 21243706 intron Eip78C + chr3L 21247512 intron Eip78C + chr3L 21251318 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-849 2881 chr3L 21274164 21274230 chr3L 21274385 21274451 26 221 8.5 6.0 7.2 3.2 287 chr3L 21274164 intron AcCoAS - chr3L 21274308 intron AcCoAS - chr3L 21274451 intron AcCoAS - chr3L_26_21270001 chr3L_21270001 RAL-849 2882 chr3L 21306117 21306172 chr3L 21315326 21315381 roo 27 9209 6.0 10.5 8.2 2.9 9264 chr3L 21306117 3` UTR CG7632 + chr3L 21310749 intron Pc - chr3L 21315381 3` UTR Pc - chr3L_27_21310001 chr3L_21310001 RAL-849 2883 chr3L 21319486 21319490 chr3L 21319626 21319630 4 140 18.5 8.0 13.2 0.3 144 chr3L 21319486 5` UTR Rab26 + chr3L 21319558 5` UTR Rab26 + chr3L 21319630 5` UTR Rab26 + chr3L_4_21315001 chr3L_21315001 RAL-849 2884 chr3L 21319492 21319533 chr3L 21319625 21319673 26 138 9.5 7.5 8.5 2.7 181 chr3L 21319492 5` UTR Rab26 + chr3L 21319582 5` UTR Rab26 + chr3L 21319673 5` UTR Rab26 + chr3L_26_21315001 chr3L_21315001 RAL-849 2885 chr3L 21319534 21319553 chr3L 21319674 21319693 10 140 6.5 17.0 11.8 0.8 159 chr3L 21319534 5` UTR Rab26 + chr3L 21319614 5` UTR Rab26 + chr3L 21319693 5` UTR Rab26 + chr3L_10_21315001 chr3L_21315001 RAL-849 2886 chr3L 21361675 21361744 chr3L 21362679 21362748 G2 25 1002 9.0 5.5 7.2 3.0 1073 chr3L 21361675 intergenic CG32440 + chr3L 21362212 intergenic not near genes chr3L 21362748 intergenic not near genes chr3L_25_21360001 chr3L_21360001 RAL-849 2887 chr3L 21363009 21363030 chr3L 21363647 21363660 INE-1 11 637 13.5 4.0 8.8 1.1 651 chr3L 21363009 intergenic not near genes chr3L 21363334 intergenic not near genes chr3L 21363660 intergenic not near genes chr3L_11_21360001 chr3L_21360001 RAL-849 2888 chr3L 21372679 21372749 chr3L 21379237 21379305 McClintock 19 6557 4.0 5.0 4.5 3.5 6626 chr3L 21372679 intergenic not near genes chr3L 21375992 intergenic not near genes chr3L 21379305 intergenic not near genes chr3L_19_21375001 chr3L_21375001 RAL-849 2889 chr3L 21415085 21415159 chr3L 21415218 21415292 31 131 8.5 10.0 9.2 3.0 207 chr3L 21415085 intron rgn + chr3L 21415188 intron rgn + chr3L 21415292 intron rgn + chr3L_31_21415001 chr3L_21415001 RAL-849 2890 chr3L 4341331 4341333 chr3L 21448026 21448026 7 17106694 30.0 31.5 30.8 0.2 17106695 chr3L 4341331 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_7_12890001 chr3L_12890001 RAL-849 2891 chr3L 21498841 21498849 chr3L 21500510 21500535 1360 4 1682 13.0 14.5 13.8 0.3 1694 chr3L 21498841 intron Glg1 - chr3L 21499688 intron Glg1 - chr3L 21500535 intron Glg1 - chr3L_4_21495001 chr3L_21495001 RAL-849 2892 chr3L 21542647 21542694 chr3L 21548779 21548826 18 6134 61.5 51.0 56.2 0.3 6179 chr3L 21542647 exon CG33290 + chr3L 21545736 exon Wnk - chr3L 21548826 exon Wnk - chr3L_18_21545001 chr3L_21545001 RAL-849 2893 chr3L 21542641 21542708 chr3L 21548835 21548860 8 6151 62.0 40.5 51.2 0.2 6219 chr3L 21542641 exon CG33290 + chr3L 21545750 exon Wnk - chr3L 21548860 intron Wnk - chr3L_8_21545001 chr3L_21545001 RAL-849 2894 chr3L 21644986 21645063 chr3L 21645124 21645201 30 136 9.5 4.5 7.0 3.8 215 chr3L 21644986 5` UTR CG43980 + chr3L 21645094 5` UTR CG43980 + chr3L 21645201 5` UTR CG43980 + chr3L_30_21645001 chr3L_21645001 RAL-849 2895 chr3L 21650864 21650938 chr3L 21651090 21651122 47 222 8.5 6.5 7.5 5.5 258 chr3L 21650864 intron CG43980 + chr3L 21650993 intron CG43980 + chr3L 21651122 intron CG43980 + chr3L_47_21650001 chr3L_21650001 RAL-849 2896 chr3L 21685052 21685120 chr3L 21685181 21685249 19 129 3.5 7.0 5.2 3.1 197 chr3L 21685052 intergenic CR43978 + chr3L 21685150 intergenic CR43978 + chr3L 21685249 intergenic CR43978 + chr3L_19_21685001 chr3L_21685001 RAL-849 2897 chr3L 21703949 21703999 chr3L 21704099 21704149 16 149 7.5 2.0 4.8 2.8 200 chr3L 21703949 intron CG32447 - chr3L 21704049 intron CG32447 - chr3L 21704149 intron CG32447 - chr3L_16_21700001 chr3L_21700001 RAL-849 2898 chr3L 21749272 21749339 chr3L 21754482 21754549 Doc 18 5208 8.5 9.0 8.8 1.8 5277 chr3L 21749272 intron Syn1 - chr3L 21751910 intron Syn1 - chr3L 21754549 intron Syn1 - chr3L_18_21750001 chr3L_21750001 RAL-849 2899 chr3L 21769007 21769046 chr3L 21769144 21769183 12 136 8.0 5.5 6.8 1.5 176 chr3L 21769007 intron,intron Syn1 -,CG42689 + chr3L 21769095 intron,intron Syn1 -,CG42689 + chr3L 21769183 intron,intron Syn1 -,CG42689 + chr3L_12_21765001 chr3L_21765001 RAL-849 2900 chr3L 21769050 21769079 chr3L 21769187 21769216 10 137 4.5 13.5 9.0 1.0 166 chr3L 21769050 intron,intron Syn1 -,CG42689 + chr3L 21769133 intron,intron Syn1 -,CG42689 + chr3L 21769216 intron,intron Syn1 -,CG42689 + chr3L_10_21765001 chr3L_21765001 RAL-849 2901 chr3L 21769993 21770038 chr3L 21770130 21770175 17 133 12.0 14.0 13.0 1.2 182 chr3L 21769993 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770084 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770175 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_17_21770001 chr3L_21770001 RAL-849 2902 chr3L 21809951 21809965 chr3L 21810071 21810096 6 128 23.5 21.5 22.5 0.3 145 chr3L 21809951 intron eg + chr3L 21810024 intron eg + chr3L 21810096 intron eg + chr3L_6_21810001 chr3L_21810001 RAL-849 2903 chr3L 21824399 21824465 chr3L 21824537 21824603 23 138 6.0 7.5 6.8 2.9 204 chr3L 21824399 3` UTR CG7407 + chr3L 21824501 3` UTR CG7407 + chr3L 21824603 intergenic CG7407 +,CG7414 + chr3L_23_21820001 chr3L_21820001 RAL-849 2904 chr3L 21828291 21828335 chr3L 21828544 21828588 19 253 11.0 7.0 9.0 1.9 297 chr3L 21828291 5` UTR CG32448 - chr3L 21828440 intron CG32448 - chr3L 21828588 intergenic CG32448 - chr3L_19_21825001 chr3L_21825001 RAL-849 2905 chr3L 21836689 21836754 chr3L 21836825 21836890 23 135 10.5 7.0 8.8 2.3 201 chr3L 21836689 3` UTR P5CDh1 - chr3L 21836790 3` UTR P5CDh1 - chr3L 21836890 3` UTR P5CDh1 - chr3L_23_21835001 chr3L_21835001 RAL-849 2906 chr3L 21845170 21845233 chr3L 21845361 21845424 22 191 4.5 7.0 5.8 3.2 254 chr3L 21845170 5` UTR mub + chr3L 21845297 intron mub + chr3L 21845424 intron mub + chr3L_22_21845001 chr3L_21845001 RAL-849 2907 chr3L 21872390 21872453 chr3L 21872519 21872572 21 128 6.0 13.5 9.8 1.9 182 chr3L 21872390 intron mub + chr3L 21872481 intron mub + chr3L 21872572 intron mub + chr3L_21_21870001 chr3L_21870001 RAL-849 2908 chr3L 21872898 21872908 chr3L 21873082 21873092 7 184 22.5 7.5 15.0 0.4 194 chr3L 21872898 intron mub + chr3L 21872995 intron mub + chr3L 21873092 intron mub + chr3L_7_21870001 chr3L_21870001 RAL-849 2909 chr3L 21872911 21872971 chr3L 21873080 21873154 38 181 9.5 7.0 8.2 4.1 243 chr3L 21872911 intron mub + chr3L 21873032 intron mub + chr3L 21873154 intron mub + chr3L_38_21870001 chr3L_21870001 RAL-849 2910 chr3L 22006711 22006786 chr3L 22006885 22006960 25 174 9.0 4.5 6.8 3.2 249 chr3L 22006711 intergenic not near genes chr3L 22006836 intergenic not near genes chr3L 22006960 intergenic not near genes chr3L_25_22005001 chr3L_22005001 RAL-849 2911 chr3L 22034559 22034630 chr3L 22034711 22034782 28 152 7.5 10.0 8.8 2.9 223 chr3L 22034559 intergenic Oct-TyrR + chr3L 22034670 intergenic Oct-TyrR + chr3L 22034782 intergenic Oct-TyrR + chr3L_28_22030001 chr3L_22030001 RAL-849 2912 chr3L 22099632 22099697 chr3L 22105868 22105933 3S18 25 6235 11.5 9.0 10.2 2.2 6301 chr3L 22099632 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105933 intergenic not near genes chr3L_25_22100001 chr3L_22100001 RAL-849 2913 chr3L 22122121 22122154 chr3L 22122515 22122548 9 394 13.5 6.5 10.0 0.8 427 chr3L 22122121 5` UTR CR45236 + chr3L 22122334 intergenic CR45236 +,CR45235 + chr3L 22122548 intergenic CR45235 +,CR45236 + chr3L_9_22120001 chr3L_22120001 RAL-849 2914 chr3L 22122155 22122188 chr3L 22122513 22122582 6 388 7.0 5.5 6.2 0.8 427 chr3L 22122155 5` UTR CR45236 + chr3L 22122368 intergenic CR45236 +,CR45235 + chr3L 22122582 intergenic CR45235 +,CR45236 + chr3L_6_22120001 chr3L_22120001 RAL-849 2915 chr3L 22130453 22130519 chr3L 22130649 22130715 18 196 3.0 7.0 5.0 3.0 262 chr3L 22130453 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130715 intergenic not near genes chr3L_18_22130001 chr3L_22130001 RAL-849 2916 chr3L 22137611 22137686 chr3L 22137748 22137823 26 136 8.0 6.5 7.2 3.2 212 chr3L 22137611 intron olf413 + chr3L 22137717 intron olf413 + chr3L 22137823 intron olf413 + chr3L_26_22135001 chr3L_22135001 RAL-849 2917 chr3L 22223393 22223465 chr3L 22223604 22223626 16 204 8.5 4.5 6.5 2.1 233 chr3L 22223393 intron olf413 + chr3L 22223510 intron olf413 + chr3L 22223626 intron olf413 + chr3L_16_22220001 chr3L_22220001 RAL-849 2918 chr3L 22338161 22338201 chr3L 22338584 22338640 18 432 10.5 13.5 12.0 1.4 479 chr3L 22338161 intron Ten-m - chr3L 22338400 intron Ten-m - chr3L 22338640 intron Ten-m - chr3L_18_22335001 chr3L_22335001 RAL-849 2919 chr3L 22379890 22379964 chr3L 22380039 22380112 31 145 8.5 8.0 8.2 3.4 222 chr3L 22379890 intron Ten-m - chr3L 22380001 intron Ten-m - chr3L 22380112 intron Ten-m - chr3L_31_22380001 chr3L_22380001 RAL-849 2920 chr3L 22413826 22413899 chr3L 22413957 22414033 23 132 7.0 7.5 7.2 2.8 207 chr3L 22413826 intergenic not near genes chr3L 22413930 intergenic not near genes chr3L 22414033 intergenic not near genes chr3L_23_22410001 chr3L_22410001 RAL-849 2921 chr3L 22441070 22441143 chr3L 22441222 22441295 23 152 6.0 5.5 5.8 3.4 225 chr3L 22441070 intergenic not near genes chr3L 22441182 intergenic not near genes chr3L 22441295 intergenic not near genes chr3L_23_22440001 chr3L_22440001 RAL-849 2922 chr3L 22522651 22522712 chr3L 22522778 22522833 31 127 12.0 6.5 9.2 3.0 182 chr3L 22522651 intergenic not near genes chr3L 22522742 intergenic not near genes chr3L 22522833 intergenic not near genes chr3L_31_22520001 chr3L_22520001 RAL-849 2923 chr3L 22543038 22543095 chr3L 22543165 22543222 15 127 7.0 5.5 6.2 2.1 184 chr3L 22543038 intergenic not near genes chr3L 22543130 intergenic not near genes chr3L 22543222 intergenic not near genes chr3L_15_22540001 chr3L_22540001 RAL-849 2924 chr3L 22555725 22555792 chr3L 22563245 22563305 blood 29 7518 8.5 8.5 8.5 3.1 7580 chr3L 22555725 intergenic not near genes chr3L 22559515 intergenic not near genes chr3L 22563305 intergenic not near genes chr3L_29_22555001 chr3L_22555001 RAL-849 2925 chr3L 22570380 22570456 chr3L 22570574 22570631 29 192 5.5 6.0 5.8 4.3 251 chr3L 22570380 intergenic not near genes chr3L 22570506 intergenic not near genes chr3L 22570631 intergenic not near genes chr3L_29_22570001 chr3L_22570001 RAL-849 2926 chr3L 22577577 22577641 chr3L 22582415 22582479 Doc 19 4831 9.5 8.0 8.8 1.9 4902 chr3L 22577577 intergenic not near genes chr3L 22580028 intergenic not near genes chr3L 22582479 3` UTR CG14459 - chr3L_19_22580001 chr3L_22580001 RAL-849 2927 chr3L 22603866 22603944 chr3L 22603998 22604076 39 131 5.5 7.5 6.5 5.2 210 chr3L 22603866 intron CG14459 - chr3L 22603971 intron CG14459 - chr3L 22604076 intron CG14459 - chr3L_39_22600001 chr3L_22600001 RAL-849 2928 chr3L 22617157 22617211 chr3L 22624659 22624713 blood 18 7502 12.5 17.0 14.8 1.1 7556 chr3L 22617157 intron CG14459 - chr3L 22620935 intron CG14459 - chr3L 22624713 intron CG14459 - chr3L_18_22620001 chr3L_22620001 RAL-849 2929 chr3L 22626827 22626893 chr3L 22626967 22627033 22 139 8.5 9.5 9.0 2.2 206 chr3L 22626827 intron CG14459 - chr3L 22626930 intron CG14459 - chr3L 22627033 intron CG14459 - chr3L_22_22625001 chr3L_22625001 RAL-849 2930 chr3L 22761351 22761402 chr3L 22766835 22766885 Ivk 11 5484 12.5 10.5 11.5 0.9 5534 chr3L 22761351 intron SPoCk + chr3L 22764118 intron SPoCk + chr3L 22766885 intron SPoCk + chr3L_11_22760001 chr3L_22760001 RAL-849 2931 chr3L 22853486 22853714 chr3L 22853623 22853850 25 134 6.5 27.5 17.0 1.4 364 chr3L 22853486 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853668 5` UTR CR43426 + chr3L 22853850 5` UTR CR43426 + chr3L_25_22850001 chr3L_22850001 RAL-849 2932 chr3L 22865941 22866004 chr3L 22867124 22867187 Doc 24 1183 7.0 6.0 6.5 3.2 1246 chr3L 22865941 exon CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867187 intron CG33170 + chr3L_24_22865001 chr3L_22865001 RAL-849 2933 chr3L 22894189 22894199 chr3L 22894412 22894420 6 222 18.0 7.5 12.8 0.4 231 chr3L 22894189 intergenic slif + chr3L 22894304 intergenic slif + chr3L 22894420 intergenic not near genes chr3L_6_22890001 chr3L_22890001 RAL-849 2934 chr3L 22894200 22894257 chr3L 22894408 22894480 29 219 9.5 7.0 8.2 3.2 280 chr3L 22894200 intergenic slif + chr3L 22894340 intergenic not near genes chr3L 22894480 intergenic not near genes chr3L_29_22890001 chr3L_22890001 RAL-849 2935 chr3L 22897178 22897220 chr3L 22897291 22897352 22 130 10.5 5.5 8.0 2.4 174 chr3L 22897178 intergenic not near genes chr3L 22897265 intergenic not near genes chr3L 22897352 intergenic not near genes chr3L_22_22895001 chr3L_22895001 RAL-849 2936 chr3L 9102752 9102824 chr3L 22908066 22908066 6 13805271 55.5 39.5 47.5 0.1 13805314 chr3L 9102752 exon bol - chr3L 16005409 exon mRpS31 + chr3L 22908066 intergenic not near genes chr3L_6_16005001 chr3L_16005001 RAL-849 2937 chr3L 19220633 19220637 chr3L 22908066 22908066 66 3687432 41.5 39.5 40.5 1.6 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_66_21060001 chr3L_21060001 RAL-849 2938 chr3L 20525228 20525229 chr3L 22908066 22908066 16 2382838 16.5 39.5 28.0 0.6 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_16_21715001 chr3L_21715001 RAL-849 2939 chr3L 9102785 9102810 chr3L 22908067 22908067 4 13805272 53.5 38.5 46.0 0.1 13805282 chr3L 9102785 exon bol - chr3L 16005426 exon mRpS31 + chr3L 22908067 intergenic not near genes chr3L_4_16005001 chr3L_16005001 RAL-849 2940 chr3L 19220633 19220637 chr3L 22908067 22908067 33 3687433 41.5 38.5 40.0 0.8 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_33_21060001 chr3L_21060001 RAL-849 2941 chr3L 20525228 20525230 chr3L 22908067 22908067 6 2382838 15.5 38.5 27.0 0.2 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-849 2942 chr3L 22989822 22989882 chr3L 22996846 22996906 297 24 7022 10.0 8.5 9.2 2.4 7084 chr3L 22989822 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996906 intergenic not near genes chr3L_24_22990001 chr3L_22990001 RAL-849 2943 chr3L 23165874 23165907 chr3L 23173368 23173401 Quasimodo 4 7494 8.0 4.5 6.2 0.6 7527 chr3L 23165874 intergenic not near genes chr3L 23169638 intergenic not near genes chr3L 23173401 intergenic not near genes chr3L_4_23165001 chr3L_23165001 RAL-849 2944 chr3L 23218001 23218069 chr3L 23218531 23218599 26 529 9.0 5.5 7.2 3.2 598 chr3L 23218001 intron nAChRalpha4 + chr3L 23218300 intron nAChRalpha4 + chr3L 23218599 intron nAChRalpha4 + chr3L_26_23215001 chr3L_23215001 RAL-849 2945 chr3L 23246348 23246420 chr3L 23246488 23246560 19 135 3.0 4.0 3.5 4.2 212 chr3L 23246348 intron nAChRalpha4 + chr3L 23246454 intron nAChRalpha4 + chr3L 23246560 intron nAChRalpha4 + chr3L_19_23245001 chr3L_23245001 RAL-849 2946 chr3L 23717386 23717398 chr3L 23723552 23723557 INE-1 5 6154 48.0 43.0 45.5 0.1 6171 chr3L 23717386 intergenic not near genes chr3L 23720472 intergenic not near genes chr3L 23723557 intergenic not near genes chr3L_5_23720001 chr3L_23720001 RAL-849 2947 chr3L 24008347 24008418 chr3L 24008626 24008697 26 277 6.0 9.0 7.5 3.1 350 chr3L 24008347 intergenic not near genes chr3L 24008522 intergenic not near genes chr3L 24008697 intergenic not near genes chr3L_26_24005001 chr3L_24005001 RAL-849 2948 chr3L 24012371 24012428 chr3L 24020762 24020819 roo 24 8391 4.0 6.0 5.0 4.0 8448 chr3L 24012371 intergenic not near genes chr3L 24016595 intergenic not near genes chr3L 24020819 intergenic not near genes chr3L_24_24015001 chr3L_24015001 RAL-849 2949 chr3L 24168764 24168809 chr3L 24176116 24176132 ZAM 18 7357 10.5 7.0 8.8 1.8 7368 chr3L 24168764 intron Snap25 + chr3L 24172448 intron Snap25 + chr3L 24176132 intron Snap25 + chr3L_18_24170001 chr3L_24170001 RAL-849 2950 chr3L 24791850 24791885 chr3L 24796679 24796714 Doc 14 4829 9.0 5.0 7.0 1.8 4864 chr3L 24791850 intergenic not near genes chr3L 24794282 intergenic not near genes chr3L 24796714 intergenic not near genes chr3L_14_24790001 chr3L_24790001 RAL-849 2951 chr3L 25190037 25190092 chr3L 25191237 25191292 1360 6 1200 28.0 34.0 31.0 0.2 1255 chr3L 25190037 intergenic not near genes chr3L 25190664 intergenic not near genes chr3L 25191292 intergenic not near genes chr3L_6_25190001 chr3L_25190001 RAL-849 2952 chr3L 25331586 25331647 chr3L 25331727 25331781 9 135 2.5 3.5 3.0 2.2 195 chr3L 25331586 intergenic not near genes chr3L 25331684 intergenic not near genes chr3L 25331781 intergenic not near genes chr3L_9_25330001 chr3L_25330001 RAL-849 2953 chr3L 25353998 25354066 chr3L 25354229 25354298 19 230 3.0 7.5 5.2 3.1 300 chr3L 25353998 intergenic not near genes chr3L 25354148 intergenic not near genes chr3L 25354298 intergenic not near genes chr3L_19_25350001 chr3L_25350001 RAL-849 2954 chr3L 26696008 26696010 chr3L 26697288 26697290 4 1280 26.5 13.5 20.0 0.2 1282 chr3L 26696008 intergenic not near genes chr3L 26696649 intergenic not near genes chr3L 26697290 intergenic not near genes chr3L_4_26695001 chr3L_26695001 RAL-849 2955 chr3L 23941237 23941238 chr3L 26882296 26882297 1360 7 2941059 24.0 4.0 14.0 0.5 2941060 chr3L 23941237 intron CG40470 - chr3L 25411767 intergenic not near genes chr3L 26882297 intergenic not near genes chr3L_7_25410001 chr3L_25410001 RAL-849 2956 chr3L 23941240 23941241 chr3L 26882299 26882300 1360 4 2941059 23.5 4.0 13.8 0.3 2941060 chr3L 23941240 intron CG40470 - chr3L 25411770 intergenic not near genes chr3L 26882300 intergenic not near genes chr3L_4_25410001 chr3L_25410001 RAL-849 2957 chr3L 27383174 27383178 chr3L 27383369 27383373 4 195 42.5 22.0 32.2 0.1 199 chr3L 27383174 intron Dbp80 + chr3L 27383274 intron Dbp80 + chr3L 27383373 intron Dbp80 + chr3L_4_27380001 chr3L_27380001 RAL-849 2958 chr3L 27390639 27390712 chr3L 27390768 27390841 13 125 53.0 50.0 51.5 0.2 202 chr3L 27390639 intron Dbp80 + chr3L 27390740 intron Dbp80 + chr3L 27390841 intron Dbp80 + chr3L_13_27390001 chr3L_27390001 RAL-849 2959 chr3R 1521167 1521182 chr3R 1521244 1521320 25 130 25.0 25.5 25.2 1.0 153 chr3R 1521167 intergenic not near genes chr3R 1521244 intergenic not near genes chr3R 1521320 intergenic not near genes chr3R_25_1520001 chr3R_1520001 RAL-849 2960 chr3R 2490902 2490927 chr3R 2491011 2491056 11 135 4.5 5.5 5.0 1.8 154 chr3R 2490902 intergenic not near genes chr3R 2490979 intergenic not near genes chr3R 2491056 intergenic not near genes chr3R_11_2490001 chr3R_2490001 RAL-849 2961 chr3R 2534089 2534157 chr3R 2541708 2541776 17 7617 23.5 19.0 21.2 0.8 7687 chr3R 2534089 intergenic not near genes chr3R 2537932 intergenic not near genes chr3R 2541776 intergenic not near genes chr3R_17_2535001 chr3R_2535001 RAL-849 2962 chr3R 2998416 2998488 chr3R 2998542 2998614 13 125 6.5 6.5 6.5 1.7 198 chr3R 2998416 intron CG42618 - chr3R 2998515 intron CG42618 - chr3R 2998614 intron CG42618 - chr3R_13_2995001 chr3R_2995001 RAL-849 2963 chr3R 4105005 4105044 chr3R 4110258 4110298 copia 4 5254 6.0 6.0 6.0 0.6 5293 chr3R 4105005 intergenic not near genes chr3R 4107652 intergenic not near genes chr3R 4110298 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-849 2964 chr3R 4132855 4132930 chr3R 4133059 4133134 11 204 1.0 2.5 1.8 3.9 279 chr3R 4132855 intron Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133134 intron Gfat1 + chr3R_11_4130001 chr3R_4130001 RAL-849 2965 chr3R 4206027 4206093 chr3R 4211652 4211718 mdg3 14 5625 5.0 4.0 4.5 2.5 5691 chr3R 4206027 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211718 intron CG14636 - chr3R_14_4205001 chr3R_4205001 RAL-849 2966 chr3R 4366715 4366776 chr3R 4375148 4375209 roo 26 8433 10.0 5.5 7.8 3.0 8494 chr3R 4366715 3` UTR CG1090 + chr3R 4370962 intergenic not near genes chr3R 4375209 5` UTR CR44922 + chr3R_26_4370001 chr3R_4370001 RAL-849 2967 chr3R 4408371 4408432 chr3R 4412725 4412784 Juan 24 4353 8.0 6.0 7.0 3.0 4413 chr3R 4408371 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412784 intron CG32944 - chr3R_24_4410001 chr3R_4410001 RAL-849 2968 chr3R 4609508 4609571 chr3R 4610722 4610785 1360 30 1212 11.5 11.5 11.5 2.4 1277 chr3R 4609508 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610785 intergenic not near genes chr3R_30_4610001 chr3R_4610001 RAL-849 2969 chr3R 4657229 4657270 chr3R 4657583 4657624 12 353 5.5 10.5 8.0 1.3 395 chr3R 4657229 intron spartin + chr3R 4657426 intron spartin + chr3R 4657624 exon spartin + chr3R_12_4655001 chr3R_4655001 RAL-849 2970 chr3R 4680665 4680736 chr3R 4680794 4680865 23 129 7.5 7.5 7.5 2.7 200 chr3R 4680665 intron CG43427 + chr3R 4680765 intron CG43427 + chr3R 4680865 intron CG43427 + chr3R_23_4680001 chr3R_4680001 RAL-849 2971 chr3R 4733630 4733698 chr3R 4733804 4733872 27 173 9.5 8.0 8.8 2.8 242 chr3R 4733630 intergenic not near genes chr3R 4733751 intergenic not near genes chr3R 4733872 intergenic not near genes chr3R_27_4730001 chr3R_4730001 RAL-849 2972 chr3R 4753204 4753261 chr3R 4757557 4757614 F-element 19 4353 10.0 13.5 11.8 1.5 4410 chr3R 4753204 intron,intron atms +,CG44098 - chr3R 4755409 intron,intron atms +,CG44098 - chr3R 4757614 intron,exon atms +,CG44098 - chr3R_19_4755001 chr3R_4755001 RAL-849 2973 chr3R 4796067 4796137 chr3R 4796240 4796310 36 171 10.5 8.0 9.2 3.5 243 chr3R 4796067 intron ctrip - chr3R 4796188 intron ctrip - chr3R 4796310 intron ctrip - chr3R_36_4795001 chr3R_4795001 RAL-849 2974 chr3R 4861536 4861594 chr3R 4861657 4861725 28 123 8.0 9.5 8.8 2.9 189 chr3R 4861536 intron opa + chr3R 4861630 intron opa + chr3R 4861725 intron opa + chr3R_28_4860001 chr3R_4860001 RAL-849 2975 chr3R 4887438 4887508 chr3R 4894864 4894929 rover 19 7424 6.0 8.0 7.0 2.4 7491 chr3R 4887438 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894929 intergenic not near genes chr3R_19_4890001 chr3R_4890001 RAL-849 2976 chr3R 4922296 4922358 chr3R 4922425 4922487 22 129 8.5 8.5 8.5 2.3 191 chr3R 4922296 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922487 intron Cdep + chr3R_22_4920001 chr3R_4920001 RAL-849 2977 chr3R 4943580 4943589 chr3R 4943735 4943744 4 155 17.0 8.0 12.5 0.3 164 chr3R 4943580 intron Cdep + chr3R 4943662 intron Cdep + chr3R 4943744 intron Cdep + chr3R_4_4940001 chr3R_4940001 RAL-849 2978 chr3R 4943591 4943622 chr3R 4943726 4943775 11 145 8.5 7.0 7.8 1.2 184 chr3R 4943591 intron Cdep + chr3R 4943683 intron Cdep + chr3R 4943775 intron Cdep + chr3R_11_4940001 chr3R_4940001 RAL-849 2979 chr3R 4981389 4981408 chr3R 4981491 4981534 6 117 10.0 4.0 7.0 0.8 145 chr3R 4981389 intergenic not near genes chr3R 4981462 intergenic not near genes chr3R 4981534 intergenic CG14662 - chr3R_6_4980001 chr3R_4980001 RAL-849 2980 chr3R 4981410 4981440 chr3R 4981488 4981554 7 105 8.5 4.0 6.2 1.0 144 chr3R 4981410 intergenic not near genes chr3R 4981482 intergenic not near genes chr3R 4981554 intergenic CG14662 - chr3R_7_4980001 chr3R_4980001 RAL-849 2981 chr3R 4998353 4998374 chr3R 4998505 4998526 6 152 14.5 14.0 14.2 0.4 173 chr3R 4998353 intron CG2022 - chr3R 4998440 intron CG2022 - chr3R 4998526 intron CG2022 - chr3R_6_4995001 chr3R_4995001 RAL-849 2982 chr3R 5045805 5045873 chr3R 5052957 5053025 HMS-Beagle 19 7152 6.5 5.5 6.0 2.7 7220 chr3R 5045805 3` UTR CR43635 - chr3R 5049415 intergenic not near genes chr3R 5053025 intergenic CR45588 - chr3R_19_5045001 chr3R_5045001 RAL-849 2983 chr3R 5067939 5068009 chr3R 5073506 5073576 mdg3 26 5567 6.5 11.0 8.8 2.7 5637 chr3R 5067939 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073576 intergenic not near genes chr3R_26_5070001 chr3R_5070001 RAL-849 2984 chr3R 5105510 5105577 chr3R 5105630 5105645 20 105 12.0 8.5 10.2 1.8 135 chr3R 5105510 intergenic not near genes chr3R 5105578 intergenic not near genes chr3R 5105645 intergenic not near genes chr3R_20_5105001 chr3R_5105001 RAL-849 2985 chr3R 5188652 5188673 chr3R 5188764 5188810 6 130 8.5 9.5 9.0 0.6 158 chr3R 5188652 intron cno - chr3R 5188731 intron cno - chr3R 5188810 intron cno - chr3R_6_5185001 chr3R_5185001 RAL-849 2986 chr3R 5236169 5236241 chr3R 5236347 5236419 38 176 7.5 6.0 6.8 4.9 250 chr3R 5236169 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236294 3` UTR rtp - chr3R 5236419 exon rtp - chr3R_38_5235001 chr3R_5235001 RAL-849 2987 chr3R 5250856 5250909 chr3R 5251016 5251069 16 160 6.5 15.5 11.0 1.3 213 chr3R 5250856 intron CG12163 - chr3R 5250962 intron CG12163 - chr3R 5251069 intron CG12163 - chr3R_16_5250001 chr3R_5250001 RAL-849 2988 chr3R 5278045 5278110 chr3R 5278176 5278241 28 131 10.5 11.0 10.8 2.4 196 chr3R 5278045 intron mtd - chr3R 5278143 intron mtd - chr3R 5278241 intron mtd - chr3R_28_5275001 chr3R_5275001 RAL-849 2989 chr3R 5280142 5280161 chr3R 5280270 5280288 8 128 12.5 9.0 10.8 0.7 146 chr3R 5280142 intron mtd - chr3R 5280215 intron mtd - chr3R 5280288 intron mtd - chr3R_8_5280001 chr3R_5280001 RAL-849 2990 chr3R 5282958 5282967 chr3R 5283077 5283081 9 123 14.0 12.5 13.2 0.6 123 chr3R 5282958 intron mtd - chr3R 5283020 intron mtd - chr3R 5283081 intron mtd - chr3R_9_5280001 chr3R_5280001 RAL-849 2991 chr3R 5311965 5312001 chr3R 5312124 5312160 10 158 8.5 10.0 9.2 1.0 195 chr3R 5311965 intron mtd - chr3R 5312062 intron mtd - chr3R 5312160 intron mtd - chr3R_10_5310001 chr3R_5310001 RAL-849 2992 chr3R 5338354 5338416 chr3R 5343581 5343643 Rt1c 30 5227 13.0 11.5 12.2 2.3 5289 chr3R 5338354 intron mtd - chr3R 5340998 intron mtd - chr3R 5343643 intron mtd - chr3R_30_5340001 chr3R_5340001 RAL-849 2993 chr3R 5385927 5385952 chr3R 5386148 5386173 10 221 21.0 7.0 14.0 0.7 246 chr3R 5385927 intron kkv - chr3R 5386050 intron kkv - chr3R 5386173 intron kkv - chr3R_10_5385001 chr3R_5385001 RAL-849 2994 chr3R 5385955 5385994 chr3R 5386146 5386215 16 216 15.0 7.0 11.0 1.3 260 chr3R 5385955 intron kkv - chr3R 5386085 intron kkv - chr3R 5386215 intron kkv - chr3R_16_5385001 chr3R_5385001 RAL-849 2995 chr3R 5445918 5445981 chr3R 5452428 5452491 Burdock 25 6510 13.5 6.5 10.0 2.3 6573 chr3R 5445918 intron CG14669 + chr3R 5449204 intron CG14669 + chr3R 5452491 intron CG14669 + chr3R_25_5445001 chr3R_5445001 RAL-849 2996 chr3R 5506795 5506867 chr3R 5506977 5507049 20 181 4.0 5.5 4.8 3.4 254 chr3R 5506795 intergenic not near genes chr3R 5506922 intergenic not near genes chr3R 5507049 intergenic not near genes chr3R_20_5505001 chr3R_5505001 RAL-849 2997 chr3R 5680741 5680805 chr3R 5680875 5680939 27 133 15.0 7.5 11.2 2.2 198 chr3R 5680741 3` UTR Rab23 - chr3R 5680840 3` UTR Rab23 - chr3R 5680939 3` UTR Rab23 - chr3R_27_5680001 chr3R_5680001 RAL-849 2998 chr3R 5688738 5688756 chr3R 5688909 5688927 9 169 23.5 10.0 16.8 0.5 189 chr3R 5688738 intron plx + chr3R 5688832 intron plx + chr3R 5688927 intron plx + chr3R_9_5685001 chr3R_5685001 RAL-849 2999 chr3R 5688757 5688810 chr3R 5688902 5688966 20 163 8.0 8.0 8.0 2.2 209 chr3R 5688757 intron plx + chr3R 5688862 intron plx + chr3R 5688966 intron plx + chr3R_20_5685001 chr3R_5685001 RAL-849 3000 chr3R 5745974 5746037 chr3R 5746265 5746328 pogo 22 289 7.0 7.5 7.2 2.7 354 chr3R 5745974 3` UTR Madm + chr3R 5746151 3` UTR Madm + chr3R 5746328 3` UTR Madm + chr3R_22_5745001 chr3R_5745001 RAL-849 3001 chr3R 5746971 5747039 chr3R 5753212 5753280 diver 21 6241 8.5 5.0 6.8 2.7 6309 chr3R 5746971 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753280 intergenic CG2091 - chr3R_21_5750001 chr3R_5750001 RAL-849 3002 chr3R 5772336 5772400 chr3R 5772544 5772608 30 208 7.0 14.0 10.5 2.6 272 chr3R 5772336 intron CG2082 - chr3R 5772472 intron CG2082 - chr3R 5772608 intron CG2082 - chr3R_30_5770001 chr3R_5770001 RAL-849 3003 chr3R 5809067 5809139 chr3R 5809358 5809430 pogo 35 289 6.0 6.5 6.2 4.9 363 chr3R 5809067 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809430 3` UTR CG11000 + chr3R_35_5805001 chr3R_5805001 RAL-849 3004 chr3R 5846433 5846497 chr3R 5849857 5849936 34 3430 44.0 71.5 57.8 0.6 3503 chr3R 5846433 3` UTR CG1213 + chr3R 5848184 intergenic CG14676 + chr3R 5849936 3` UTR disp - chr3R_34_5845001 chr3R_5845001 RAL-849 3005 chr3R 5927523 5927579 chr3R 5927813 5927870 pogo 19 288 8.0 8.5 8.2 2.1 347 chr3R 5927523 intron CG34113 - chr3R 5927696 intron CG34113 - chr3R 5927870 intron CG34113 - chr3R_19_5925001 chr3R_5925001 RAL-849 3006 chr3R 5931422 5931448 chr3R 5931560 5931586 11 137 5.0 10.5 7.8 1.2 164 chr3R 5931422 intron CG34113 - chr3R 5931504 intron CG34113 - chr3R 5931586 intron CG34113 - chr3R_11_5930001 chr3R_5930001 RAL-849 3007 chr3R 5943353 5943417 chr3R 5943482 5943546 22 126 2.0 2.5 2.2 6.9 193 chr3R 5943353 intron CG34113 - chr3R 5943450 intron CG34113 - chr3R 5943546 intron CG34113 - chr3R_22_5940001 chr3R_5940001 RAL-849 3008 chr3R 5947925 5947991 chr3R 5948070 5948111 16 141 4.5 7.5 6.0 2.3 186 chr3R 5947925 intron CG34113 - chr3R 5948018 intron CG34113 - chr3R 5948111 intron CG34113 - chr3R_16_5945001 chr3R_5945001 RAL-849 3009 chr3R 5956513 5956528 chr3R 5956641 5956656 7 128 12.5 5.5 9.0 0.7 143 chr3R 5956513 intron CG34113 - chr3R 5956584 intron CG34113 - chr3R 5956656 intron CG34113 - chr3R_7_5955001 chr3R_5955001 RAL-849 3010 chr3R 5956541 5956583 chr3R 5956638 5956706 9 124 8.0 6.0 7.0 1.1 165 chr3R 5956541 intron CG34113 - chr3R 5956624 intron CG34113 - chr3R 5956706 intron CG34113 - chr3R_9_5955001 chr3R_5955001 RAL-849 3011 chr3R 5989298 5989358 chr3R 5989421 5989491 12 126 5.5 6.0 5.8 1.8 193 chr3R 5989298 5` UTR CR44927 + chr3R 5989394 5` UTR CR44927 + chr3R 5989491 5` UTR CR44927 + chr3R_12_5985001 chr3R_5985001 RAL-849 3012 chr3R 6015920 6015934 chr3R 6024450 6024455 Tirant 5 8528 14.5 10.5 12.5 0.4 8535 chr3R 6015920 intergenic not near genes chr3R 6020188 intergenic not near genes chr3R 6024455 intergenic not near genes chr3R_5_6020001 chr3R_6020001 RAL-849 3013 chr3R 6015937 6015989 chr3R 6024445 6024520 Tirant 23 8522 6.0 7.5 6.8 2.9 8583 chr3R 6015937 intergenic not near genes chr3R 6020228 intergenic not near genes chr3R 6024520 intergenic not near genes chr3R_23_6020001 chr3R_6020001 RAL-849 3014 chr3R 6029928 6029981 chr3R 6030167 6030232 17 249 7.0 4.0 5.5 2.6 304 chr3R 6029928 intergenic not near genes chr3R 6030080 intergenic not near genes chr3R 6030232 intergenic not near genes chr3R_17_6030001 chr3R_6030001 RAL-849 3015 chr3R 6121136 6121179 chr3R 6121371 6121447 BS 9 257 1.5 4.5 3.0 2.2 311 chr3R 6121136 intergenic not near genes chr3R 6121292 intergenic not near genes chr3R 6121447 intergenic not near genes chr3R_9_6120001 chr3R_6120001 RAL-849 3016 chr3R 6158467 6158542 chr3R 6167100 6167123 Tirant 26 8622 7.0 10.0 8.5 2.7 8656 chr3R 6158467 intergenic not near genes chr3R 6162795 intergenic not near genes chr3R 6167123 intergenic CG1077 + chr3R_26_6160001 chr3R_6160001 RAL-849 3017 chr3R 6175127 6175190 chr3R 6182449 6182507 HMS-Beagle2 24 7322 5.0 9.5 7.2 2.9 7380 chr3R 6175127 intergenic Osi1 + chr3R 6178817 intron CR45194 + chr3R 6182507 intergenic CR45194 + chr3R_24_6175001 chr3R_6175001 RAL-849 3018 chr3R 6191125 6191192 chr3R 6191255 6191322 28 129 12.5 8.0 10.2 2.5 197 chr3R 6191125 intron NPFR + chr3R 6191224 intron NPFR + chr3R 6191322 intron NPFR + chr3R_28_6190001 chr3R_6190001 RAL-849 3019 chr3R 6206247 6206312 chr3R 6206513 6206577 BS 30 264 11.0 10.0 10.5 2.6 330 chr3R 6206247 exon Osi24 + chr3R 6206412 intron Osi24 + chr3R 6206577 intron Osi24 + chr3R_30_6205001 chr3R_6205001 RAL-849 3020 chr3R 6428772 6428833 chr3R 6428924 6428985 22 152 4.5 4.5 4.5 4.0 213 chr3R 6428772 intron gpp + chr3R 6428878 intron gpp + chr3R 6428985 intron gpp + chr3R_22_6425001 chr3R_6425001 RAL-849 3021 chr3R 6444787 6444827 chr3R 6444914 6444954 15 127 14.5 11.5 13.0 1.1 167 chr3R 6444787 intron gpp + chr3R 6444870 intron gpp + chr3R 6444954 intron gpp + chr3R_15_6440001 chr3R_6440001 RAL-849 3022 chr3R 6461546 6461601 chr3R 6461676 6461731 50 130 24.0 12.5 18.2 2.6 185 chr3R 6461546 intergenic not near genes chr3R 6461638 intergenic not near genes chr3R 6461731 intergenic not near genes chr3R_50_6460001 chr3R_6460001 RAL-849 3023 chr3R 6509982 6510042 chr3R 6515113 6515173 jockey 25 5131 8.0 5.5 6.8 3.2 5191 chr3R 6509982 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515173 intergenic not near genes chr3R_25_6510001 chr3R_6510001 RAL-849 3024 chr3R 6523275 6523340 chr3R 6523701 6523766 17 425 7.5 3.5 5.5 2.6 491 chr3R 6523275 intergenic not near genes chr3R 6523520 intergenic not near genes chr3R 6523766 intergenic not near genes chr3R_17_6520001 chr3R_6520001 RAL-849 3025 chr3R 6532064 6532131 chr3R 6532488 6532555 16 424 4.5 8.0 6.2 2.2 491 chr3R 6532064 intron dpr11 - chr3R 6532310 intron dpr11 - chr3R 6532555 intron dpr11 - chr3R_16_6530001 chr3R_6530001 RAL-849 3026 chr3R 6533938 6534035 chr3R 6534096 6534173 4 143 0.5 7.5 4.0 0.8 235 chr3R 6533938 intron dpr11 - chr3R 6534056 intron dpr11 - chr3R 6534173 intron dpr11 - chr3R_4_6530001 chr3R_6530001 RAL-849 3027 chr3R 6561912 6561969 chr3R 6562046 6562103 21 134 6.0 7.0 6.5 2.8 191 chr3R 6561912 intron dpr11 - chr3R 6562008 intron dpr11 - chr3R 6562103 intron dpr11 - chr3R_21_6560001 chr3R_6560001 RAL-849 3028 chr3R 6639861 6639919 chr3R 6639989 6640051 18 125 9.0 0.0 4.5 3.3 190 chr3R 6639861 intergenic not near genes chr3R 6639956 intergenic not near genes chr3R 6640051 intergenic not near genes chr3R_18_6635001 chr3R_6635001 RAL-849 3029 chr3R 6689296 6689365 chr3R 6689428 6689497 27 128 3.5 0.5 2.0 9.0 201 chr3R 6689296 intergenic Ccp84Af - chr3R 6689396 intergenic Ccp84Af - chr3R 6689497 intergenic Ccp84Af - chr3R_27_6685001 chr3R_6685001 RAL-849 3030 chr3R 6693599 6693667 chr3R 6693736 6693804 14 137 6.5 2.5 4.5 2.5 205 chr3R 6693599 intergenic Ccp84Ad + chr3R 6693702 intergenic Ccp84Ad + chr3R 6693804 intergenic Ccp84Ad + chr3R_14_6690001 chr3R_6690001 RAL-849 3031 chr3R 6693937 6694002 chr3R 6694081 6694146 14 144 4.5 5.5 5.0 2.3 209 chr3R 6693937 intergenic Ccp84Ad + chr3R 6694042 intergenic not near genes chr3R 6694146 intergenic not near genes chr3R_14_6690001 chr3R_6690001 RAL-849 3032 chr3R 6705628 6705707 chr3R 6705909 6705982 12 276 0.0 7.0 3.5 2.7 354 chr3R 6705628 intergenic not near genes chr3R 6705805 intergenic not near genes chr3R 6705982 intergenic not near genes chr3R_12_6705001 chr3R_6705001 RAL-849 3033 chr3R 6725117 6725170 chr3R 6725302 6725355 22 185 11.5 12.5 12.0 1.7 238 chr3R 6725117 intron pb - chr3R 6725236 intron pb - chr3R 6725355 intron pb - chr3R_22_6725001 chr3R_6725001 RAL-849 3034 chr3R 6725177 6725184 chr3R 6725362 6725369 5 185 10.0 28.0 19.0 0.2 192 chr3R 6725177 intron pb - chr3R 6725273 intron pb - chr3R 6725369 intron pb - chr3R_5_6725001 chr3R_6725001 RAL-849 3035 chr3R 6737451 6737525 chr3R 6739287 6739362 Doc 11 1834 4.5 6.0 5.2 1.8 1911 chr3R 6737451 intron pb - chr3R 6738406 intron pb - chr3R 6739362 intron pb - chr3R_11_6735001 chr3R_6735001 RAL-849 3036 chr3R 6797123 6797198 chr3R 6797261 6797336 35 136 7.0 6.5 6.8 4.5 213 chr3R 6797123 intron Dfd + chr3R 6797230 intron Dfd + chr3R 6797336 intron Dfd + chr3R_35_6795001 chr3R_6795001 RAL-849 3037 chr3R 6835322 6835387 chr3R 6835500 6835565 23 178 8.0 10.5 9.2 2.3 243 chr3R 6835322 intron Scr - chr3R 6835444 intron Scr - chr3R 6835565 intron Scr - chr3R_23_6835001 chr3R_6835001 RAL-849 3038 chr3R 6856334 6856400 chr3R 6856501 6856567 25 167 5.5 4.5 5.0 4.2 233 chr3R 6856334 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856567 intergenic not near genes chr3R_25_6855001 chr3R_6855001 RAL-849 3039 chr3R 6890166 6890235 chr3R 6890402 6890471 22 236 0.0 6.5 3.2 5.2 305 chr3R 6890166 intergenic not near genes chr3R 6890318 intergenic not near genes chr3R 6890471 intergenic not near genes chr3R_22_6890001 chr3R_6890001 RAL-849 3040 chr3R 6891212 6891263 chr3R 6891333 6891389 6 122 3.5 9.0 6.2 0.8 177 chr3R 6891212 intergenic not near genes chr3R 6891300 intergenic not near genes chr3R 6891389 intergenic not near genes chr3R_6_6890001 chr3R_6890001 RAL-849 3041 chr3R 6912056 6912133 chr3R 6912217 6912294 28 160 7.0 5.0 6.0 4.0 238 chr3R 6912056 intron Antp - chr3R 6912175 intron Antp - chr3R 6912294 intron Antp - chr3R_28_6910001 chr3R_6910001 RAL-849 3042 chr3R 6914071 6914125 chr3R 6914192 6914252 16 126 4.5 7.0 5.8 2.4 181 chr3R 6914071 intron Antp - chr3R 6914162 intron Antp - chr3R 6914252 intron Antp - chr3R_16_6910001 chr3R_6910001 RAL-849 3043 chr3R 6918024 6918066 chr3R 6918152 6918194 7 128 8.0 8.0 8.0 0.8 170 chr3R 6918024 intron Antp - chr3R 6918109 intron Antp - chr3R 6918194 intron Antp - chr3R_7_6915001 chr3R_6915001 RAL-849 3044 chr3R 6961164 6961188 chr3R 6961290 6961317 14 127 9.5 12.0 10.8 1.2 153 chr3R 6961164 intron Antp - chr3R 6961240 intron Antp - chr3R 6961317 intron Antp - chr3R_14_6960001 chr3R_6960001 RAL-849 3045 chr3R 7010838 7010892 chr3R 7010968 7011022 20 130 6.5 5.0 5.8 2.9 184 chr3R 7010838 intergenic not near genes chr3R 7010930 intergenic not near genes chr3R 7011022 intergenic not near genes chr3R_20_7010001 chr3R_7010001 RAL-849 3046 chr3R 7021646 7021707 chr3R 7021803 7021864 23 157 8.5 9.0 8.8 2.3 218 chr3R 7021646 intergenic not near genes chr3R 7021755 intergenic not near genes chr3R 7021864 intergenic not near genes chr3R_23_7020001 chr3R_7020001 RAL-849 3047 chr3R 7030657 7030727 chr3R 7030783 7030853 32 125 11.0 7.0 9.0 3.2 196 chr3R 7030657 intergenic not near genes chr3R 7030755 intergenic not near genes chr3R 7030853 intergenic not near genes chr3R_32_7030001 chr3R_7030001 RAL-849 3048 chr3R 7047273 7047338 chr3R 7047460 7047525 19 186 5.5 6.5 6.0 2.7 252 chr3R 7047273 intergenic not near genes chr3R 7047399 intergenic not near genes chr3R 7047525 intergenic not near genes chr3R_19_7045001 chr3R_7045001 RAL-849 3049 chr3R 7060207 7060262 chr3R 7060338 7060393 12 131 7.0 4.0 5.5 1.8 186 chr3R 7060207 3` UTR dj + chr3R 7060300 3` UTR dj + chr3R 7060393 3` UTR dj + chr3R_12_7060001 chr3R_7060001 RAL-849 3050 chr3R 7074524 7074566 chr3R 7074678 7074720 16 154 8.5 8.5 8.5 1.7 196 chr3R 7074524 intergenic CG1104 -,CG1943 + chr3R 7074622 intergenic CG1104 -,CG1943 + chr3R 7074720 intergenic CG1943 +,CG1104 - chr3R_16_7070001 chr3R_7070001 RAL-849 3051 chr3R 7092742 7092812 chr3R 7093356 7093426 31 612 10.5 9.5 10.0 2.8 684 chr3R 7092742 3` UTR CR43685 - chr3R 7093084 intron CR43685 - chr3R 7093426 3` UTR CR43685 - chr3R_31_7090001 chr3R_7090001 RAL-849 3052 chr3R 7103915 7103954 chr3R 7104033 7104103 24 147 8.0 10.0 9.0 2.4 188 chr3R 7103915 intron Alh - chr3R 7104009 intron Alh - chr3R 7104103 intron Alh - chr3R_24_7100001 chr3R_7100001 RAL-849 3053 chr3R 7121730 7121869 chr3R 7121863 7122022 15 148 0.0 0.0 0.0 15.0 292 chr3R 7121730 exon Alh - chr3R 7121876 intron Alh - chr3R 7122022 intron Alh - chr3R_15_7120001 chr3R_7120001 RAL-849 3054 chr3R 7155568 7155640 chr3R 7155740 7155812 21 170 7.5 12.5 10.0 1.9 244 chr3R 7155568 intergenic MAGE - chr3R 7155690 intergenic not near genes chr3R 7155812 intergenic not near genes chr3R_21_7155001 chr3R_7155001 RAL-849 3055 chr3R 7173636 7173698 chr3R 7173766 7173828 28 130 6.5 4.5 5.5 4.3 192 chr3R 7173636 intron sas + chr3R 7173732 intron sas + chr3R 7173828 intron sas + chr3R_28_7170001 chr3R_7170001 RAL-849 3056 chr3R 7261468 7261509 chr3R 7261606 7261647 21 138 15.0 8.5 11.8 1.6 179 chr3R 7261468 intron Gld - chr3R 7261558 intron Gld - chr3R 7261647 intron Gld - chr3R_21_7260001 chr3R_7260001 RAL-849 3057 chr3R 7319755 7319783 chr3R 7319885 7319914 14 130 17.0 15.0 16.0 0.8 159 chr3R 7319755 intergenic not near genes chr3R 7319834 intergenic not near genes chr3R 7319914 intergenic not near genes chr3R_14_7315001 chr3R_7315001 RAL-849 3058 chr3R 7404944 7404971 chr3R 7405070 7405097 10 126 2.5 6.5 4.5 1.8 153 chr3R 7404944 intergenic not near genes chr3R 7405020 intergenic not near genes chr3R 7405097 intergenic not near genes chr3R_10_7405001 chr3R_7405001 RAL-849 3059 chr3R 7447944 7448006 chr3R 7448072 7448134 17 128 9.0 8.0 8.5 1.8 190 chr3R 7447944 intergenic not near genes chr3R 7448039 intergenic not near genes chr3R 7448134 intergenic not near genes chr3R_17_7445001 chr3R_7445001 RAL-849 3060 chr3R 7566845 7566904 chr3R 7566986 7567045 25 141 6.5 5.5 6.0 3.6 200 chr3R 7566845 intergenic not near genes chr3R 7566945 intergenic not near genes chr3R 7567045 intergenic not near genes chr3R_25_7565001 chr3R_7565001 RAL-849 3061 chr3R 7589755 7589821 chr3R 7589926 7589981 31 168 8.5 12.0 10.2 2.8 226 chr3R 7589755 intron CG34127 - chr3R 7589868 intron CG34127 - chr3R 7589981 intron CG34127 - chr3R_31_7585001 chr3R_7585001 RAL-849 3062 chr3R 7619936 7620000 chr3R 7620075 7620139 24 139 10.0 13.5 11.8 1.9 203 chr3R 7619936 intron CG34127 - chr3R 7620038 intron CG34127 - chr3R 7620139 intron CG34127 - chr3R_24_7620001 chr3R_7620001 RAL-849 3063 chr3R 7625254 7625317 chr3R 7625752 7625815 16 498 6.0 7.0 6.5 2.1 561 chr3R 7625254 intron CG34127 - chr3R 7625534 intron CG34127 - chr3R 7625815 intron CG34127 - chr3R_16_7625001 chr3R_7625001 RAL-849 3064 chr3R 7654959 7655030 chr3R 7655091 7655162 21 131 5.5 6.5 6.0 3.0 203 chr3R 7654959 intergenic not near genes chr3R 7655060 intergenic not near genes chr3R 7655162 intergenic not near genes chr3R_21_7655001 chr3R_7655001 RAL-849 3065 chr3R 7677866 7677941 chr3R 7678029 7678104 10 163 4.5 7.0 5.8 1.5 238 chr3R 7677866 intron Nlg1 + chr3R 7677985 intron Nlg1 + chr3R 7678104 intron Nlg1 + chr3R_10_7675001 chr3R_7675001 RAL-849 3066 chr3R 7680797 7680876 chr3R 7681476 7681522 10 664 4.5 5.0 4.8 1.7 725 chr3R 7680797 intron Nlg1 + chr3R 7681160 intron Nlg1 + chr3R 7681522 intron Nlg1 + chr3R_10_7680001 chr3R_7680001 RAL-849 3067 chr3R 7694533 7694608 chr3R 7713644 7713719 invader3 13 19111 6.0 4.5 5.2 2.1 19186 chr3R 7694533 3` UTR Nlg1 + chr3R 7704126 intergenic not near genes chr3R 7713719 intergenic not near genes chr3R_13_7700001 chr3R_7700001 RAL-849 3068 chr3R 7729423 7729491 chr3R 7737411 7737453 Stalker2 20 7987 9.5 8.5 9.0 2.0 8030 chr3R 7729423 intergenic not near genes chr3R 7733438 intergenic not near genes chr3R 7737453 intergenic not near genes chr3R_20_7730001 chr3R_7730001 RAL-849 3069 chr3R 7832714 7832726 chr3R 7832841 7832853 5 127 22.5 11.0 16.8 0.3 139 chr3R 7832714 intron CG34384 + chr3R 7832784 intron CG34384 + chr3R 7832853 intron CG34384 + chr3R_5_7830001 chr3R_7830001 RAL-849 3070 chr3R 7832733 7832748 chr3R 7832840 7832855 7 115 19.5 11.0 15.2 0.4 122 chr3R 7832733 intron CG34384 + chr3R 7832794 intron CG34384 + chr3R 7832855 intron CG34384 + chr3R_7_7830001 chr3R_7830001 RAL-849 3071 chr3R 7849605 7849669 chr3R 7850822 7850883 1360 19 1215 6.0 8.5 7.2 2.3 1278 chr3R 7849605 intron CG34384 + chr3R 7850244 intron CG34384 + chr3R 7850883 intron CG34384 + chr3R_19_7850001 chr3R_7850001 RAL-849 3072 chr3R 7857600 7857662 chr3R 7857733 7857795 19 133 6.5 8.0 7.2 2.3 195 chr3R 7857600 3` UTR CG17816 - chr3R 7857698 3` UTR CG17816 - chr3R 7857795 3` UTR CG17816 - chr3R_19_7855001 chr3R_7855001 RAL-849 3073 chr3R 7883088 7883152 chr3R 7883216 7883280 24 128 8.0 4.5 6.2 3.3 192 chr3R 7883088 intron CG17816 - chr3R 7883184 intron CG17816 - chr3R 7883280 intron CG17816 - chr3R_24_7880001 chr3R_7880001 RAL-849 3074 chr3R 7773344 7773344 chr3R 7890531 7890533 4 117188 31.0 24.5 27.8 0.1 117189 chr3R 7773344 intergenic not near genes chr3R 7831938 intron CG34384 + chr3R 7890533 intron mRpS9 - chr3R_4_7830001 chr3R_7830001 RAL-849 3075 chr3R 7973290 7973335 chr3R 7974402 7974447 1360 17 1112 6.0 7.5 6.8 2.2 1157 chr3R 7973290 intergenic not near genes chr3R 7973868 intergenic not near genes chr3R 7974447 3` UTR CD98hc - chr3R_17_7970001 chr3R_7970001 RAL-849 3076 chr3R 8038285 8038308 chr3R 8038418 8038440 11 132 9.5 14.5 12.0 0.8 155 chr3R 8038285 5` UTR CR44936 + chr3R 8038362 5` UTR CR44936 + chr3R 8038440 5` UTR CR44936 + chr3R_11_8035001 chr3R_8035001 RAL-849 3077 chr3R 8082536 8082595 chr3R 8082663 8082722 14 127 10.5 9.0 9.8 1.3 186 chr3R 8082536 intron mAChR-B + chr3R 8082629 intron mAChR-B + chr3R 8082722 exon mAChR-B + chr3R_14_8080001 chr3R_8080001 RAL-849 3078 chr3R 8090515 8090554 chr3R 8094042 8094081 297 15 3526 9.0 13.5 11.2 1.2 3566 chr3R 8090515 intergenic CR44330 + chr3R 8092298 intergenic not near genes chr3R 8094081 intergenic CG7900 + chr3R_15_8090001 chr3R_8090001 RAL-849 3079 chr3R 8094363 8094425 chr3R 8099718 8099780 Transpac 29 5355 7.5 10.0 8.8 3.0 5417 chr3R 8094363 intron CG7900 + chr3R 8097072 intron CG7900 + chr3R 8099780 intron CG7900 + chr3R_29_8095001 chr3R_8095001 RAL-849 3080 chr3R 8101715 8101789 chr3R 8104848 8104894 G2 23 3130 9.0 4.0 6.5 3.1 3179 chr3R 8101715 exon CG7900 + chr3R 8103304 intron CG7900 + chr3R 8104894 3` UTR CG7900 + chr3R_23_8100001 chr3R_8100001 RAL-849 3081 chr3R 8107341 8107411 chr3R 8107525 8107595 24 184 10.0 5.0 7.5 2.8 254 chr3R 8107341 intron puc + chr3R 8107468 intron puc + chr3R 8107595 intron puc + chr3R_24_8105001 chr3R_8105001 RAL-849 3082 chr3R 8207520 8207539 chr3R 8208415 8208417 F-element 6 890 13.5 7.0 10.2 0.5 897 chr3R 8207520 intergenic not near genes chr3R 8207968 intergenic not near genes chr3R 8208417 intergenic not near genes chr3R_6_8205001 chr3R_8205001 RAL-849 3083 chr3R 8207547 8207578 chr3R 8208412 8208473 F-element 12 890 6.5 6.0 6.2 1.7 926 chr3R 8207547 intergenic not near genes chr3R 8208010 intergenic not near genes chr3R 8208473 intergenic not near genes chr3R_12_8205001 chr3R_8205001 RAL-849 3084 chr3R 8230841 8230904 chr3R 8231360 8231419 21 518 2.5 7.5 5.0 3.5 578 chr3R 8230841 3` UTR CR45551 - chr3R 8231130 3` UTR CR45551 - chr3R 8231419 3` UTR CR45551 - chr3R_21_8230001 chr3R_8230001 RAL-849 3085 chr3R 8284075 8284120 chr3R 8284194 8284254 18 129 12.0 17.5 14.8 1.1 179 chr3R 8284075 intergenic not near genes chr3R 8284164 intergenic not near genes chr3R 8284254 intergenic not near genes chr3R_18_8280001 chr3R_8280001 RAL-849 3086 chr3R 8339246 8339247 chr3R 21907534 21907536 11 13568288 35.0 36.5 35.8 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_11_15120001 chr3R_15120001 RAL-849 3087 chr3R 8402964 8403034 chr3R 8412180 8412243 roo 26 9211 12.0 10.0 11.0 2.2 9279 chr3R 8402964 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412243 intron CG45263 - chr3R_26_8405001 chr3R_8405001 RAL-849 3088 chr3R 8439478 8439522 chr3R 8439585 8439608 16 113 9.5 10.5 10.0 1.5 130 chr3R 8439478 intron CG45263 - chr3R 8439543 intron CG45263 - chr3R 8439608 intron CG45263 - chr3R_16_8435001 chr3R_8435001 RAL-849 3089 chr3R 8570441 8570502 chr3R 8575127 8575185 HMS-Beagle 12 4681 9.5 10.5 10.0 1.1 4744 chr3R 8570441 intergenic not near genes chr3R 8572813 intergenic not near genes chr3R 8575185 intergenic not near genes chr3R_12_8570001 chr3R_8570001 RAL-849 3090 chr3R 8587554 8587627 chr3R 8587840 8587868 27 282 12.0 6.5 9.2 2.6 314 chr3R 8587554 intron 5-HT2B + chr3R 8587711 intron 5-HT2B + chr3R 8587868 intron 5-HT2B + chr3R_27_8585001 chr3R_8585001 RAL-849 3091 chr3R 8601729 8601791 chr3R 8610932 8610988 roo 21 9198 8.0 8.5 8.2 2.3 9259 chr3R 8601729 intron 5-HT2B + chr3R 8606358 intron 5-HT2B + chr3R 8610988 intron 5-HT2B + chr3R_21_8605001 chr3R_8605001 RAL-849 3092 chr3R 8614740 8614814 chr3R 8614996 8615012 18 248 0.0 5.0 2.5 5.1 272 chr3R 8614740 intron 5-HT2B + chr3R 8614876 intron 5-HT2B + chr3R 8615012 intron 5-HT2B + chr3R_18_8610001 chr3R_8610001 RAL-849 3093 chr3R 8636885 8636960 chr3R 8637238 8637305 28 352 10.5 8.0 9.2 2.7 420 chr3R 8636885 intergenic not near genes chr3R 8637095 intergenic not near genes chr3R 8637305 intergenic not near genes chr3R_28_8635001 chr3R_8635001 RAL-849 3094 chr3R 8707309 8707380 chr3R 8709801 8709871 jockey 21 2489 8.0 14.0 11.0 1.8 2562 chr3R 8707309 intergenic not near genes chr3R 8708590 intergenic not near genes chr3R 8709871 intergenic not near genes chr3R_21_8705001 chr3R_8705001 RAL-849 3095 chr3R 8740194 8740271 chr3R 8740334 8740410 21 136 3.0 7.5 5.2 3.4 216 chr3R 8740194 intron CG9801 - chr3R 8740302 intron CG9801 - chr3R 8740410 intron CG9801 - chr3R_21_8740001 chr3R_8740001 RAL-849 3096 chr3R 8745704 8745775 chr3R 8745865 8745936 28 160 6.5 6.0 6.2 3.9 232 chr3R 8745704 intron CG9801 - chr3R 8745820 intron CG9801 - chr3R 8745936 intron CG9801 - chr3R_28_8745001 chr3R_8745001 RAL-849 3097 chr3R 8867694 8867742 chr3R 8867845 8867893 18 151 3.0 7.5 5.2 2.9 199 chr3R 8867694 intron pyd - chr3R 8867794 intron pyd - chr3R 8867893 intron pyd - chr3R_18_8865001 chr3R_8865001 RAL-849 3098 chr3R 8894832 8894896 chr3R 8896038 8896097 1360 25 1206 5.5 9.5 7.5 2.9 1265 chr3R 8894832 intron pyd - chr3R 8895464 intron pyd - chr3R 8896097 intron pyd - chr3R_25_8895001 chr3R_8895001 RAL-849 3099 chr3R 8898178 8898212 chr3R 8913802 8913836 297 10 15621 10.5 5.0 7.8 1.1 15658 chr3R 8898178 intron pyd - chr3R 8906007 intron pyd - chr3R 8913836 intron pyd - chr3R_10_8905001 chr3R_8905001 RAL-849 3100 chr3R 8960530 8960597 chr3R 8960657 8960724 16 127 4.5 6.5 5.5 2.5 194 chr3R 8960530 intron CG11966 - chr3R 8960627 intron CG11966 - chr3R 8960724 intron CG11966 - chr3R_16_8960001 chr3R_8960001 RAL-849 3101 chr3R 9079566 9079574 chr3R 9079714 9079722 4 148 20.5 9.0 14.8 0.3 156 chr3R 9079566 intron pum - chr3R 9079644 intron pum - chr3R 9079722 intron pum - chr3R_4_9075001 chr3R_9075001 RAL-849 3102 chr3R 9107445 9107510 chr3R 9107583 9107648 28 137 11.5 7.5 9.5 2.7 203 chr3R 9107445 intron pum - chr3R 9107546 intron pum - chr3R 9107648 intron pum - chr3R_28_9105001 chr3R_9105001 RAL-849 3103 chr3R 9108817 9108883 chr3R 9108943 9109009 22 125 10.5 5.5 8.0 2.4 192 chr3R 9108817 intron pum - chr3R 9108913 intron pum - chr3R 9109009 intron pum - chr3R_22_9105001 chr3R_9105001 RAL-849 3104 chr3R 9118821 9118891 chr3R 9119227 9119282 18 403 2.0 4.0 3.0 4.5 461 chr3R 9118821 intron pum - chr3R 9119052 intron pum - chr3R 9119282 intron pum - chr3R_18_9115001 chr3R_9115001 RAL-849 3105 chr3R 9142768 9142810 chr3R 9142951 9143019 17 203 2.0 10.0 6.0 2.4 251 chr3R 9142768 intron pum - chr3R 9142894 intron pum - chr3R 9143019 intron pum - chr3R_17_9140001 chr3R_9140001 RAL-849 3106 chr3R 9192012 9192054 chr3R 9192147 9192189 15 134 7.5 10.5 9.0 1.5 177 chr3R 9192012 intron pum - chr3R 9192100 intron pum - chr3R 9192189 intron pum - chr3R_15_9190001 chr3R_9190001 RAL-849 3107 chr3R 9278772 9278802 chr3R 9284080 9284112 Rt1a 11 5310 1.5 18.0 9.8 1.0 5340 chr3R 9278772 intergenic not near genes chr3R 9281442 intergenic not near genes chr3R 9284112 intergenic not near genes chr3R_11_9280001 chr3R_9280001 RAL-849 3108 chr3R 9319537 9319599 chr3R 9320022 9320084 jockey 25 485 8.0 12.5 10.2 2.2 547 chr3R 9319537 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320084 intron CG8861 - chr3R_25_9315001 chr3R_9315001 RAL-849 3109 chr3R 9361804 9361837 chr3R 9362095 9362128 pogo 16 291 6.0 12.5 9.2 1.6 324 chr3R 9361804 3` UTR CG45050 + chr3R 9361966 3` UTR CG45050 + chr3R 9362128 3` UTR CG45050 + chr3R_16_9360001 chr3R_9360001 RAL-849 3110 chr3R 9382772 9382841 chr3R 9382947 9383016 24 175 4.5 8.0 6.2 3.3 244 chr3R 9382772 intron FER - chr3R 9382894 intron FER - chr3R 9383016 intron FER - chr3R_24_9380001 chr3R_9380001 RAL-849 3111 chr3R 9601415 9601492 chr3R 9601583 9601660 25 167 7.0 6.5 6.8 3.2 245 chr3R 9601415 intron CG8312 + chr3R 9601538 intron CG8312 + chr3R 9601660 intron CG8312 + chr3R_25_9600001 chr3R_9600001 RAL-849 3112 chr3R 9610802 9610865 chr3R 9610994 9611056 14 190 3.0 5.0 4.0 2.8 254 chr3R 9610802 intron CG8312 + chr3R 9610929 intron CG8312 + chr3R 9611056 intron CG8312 + chr3R_14_9610001 chr3R_9610001 RAL-849 3113 chr3R 9702222 9702289 chr3R 9702348 9702405 10 114 5.5 6.5 6.0 1.4 183 chr3R 9702222 intron Unc-115a - chr3R 9702314 intron Unc-115a - chr3R 9702405 intron Unc-115a - chr3R_10_9700001 chr3R_9700001 RAL-849 3114 chr3R 9853128 9853203 chr3R 9853287 9853362 31 157 8.5 7.5 8.0 3.4 234 chr3R 9853128 intron Teh1 - chr3R 9853245 intron Teh1 - chr3R 9853362 intron Teh1 - chr3R_31_9850001 chr3R_9850001 RAL-849 3115 chr3R 9898739 9898784 chr3R 9898881 9898891 13 139 9.5 5.0 7.2 1.6 152 chr3R 9898739 intron Glut4EF + chr3R 9898815 intron Glut4EF + chr3R 9898891 intron Glut4EF + chr3R_13_9895001 chr3R_9895001 RAL-849 3116 chr3R 9898789 9898818 chr3R 9898926 9898960 12 142 3.5 15.0 9.2 1.2 171 chr3R 9898789 intron Glut4EF + chr3R 9898874 intron Glut4EF + chr3R 9898960 intron Glut4EF + chr3R_12_9895001 chr3R_9895001 RAL-849 3117 chr3R 9920797 9920807 chr3R 9920944 9920954 4 147 7.0 15.0 11.0 0.3 157 chr3R 9920797 intron Glut4EF + chr3R 9920876 intron Glut4EF + chr3R 9920954 intron Glut4EF + chr3R_4_9920001 chr3R_9920001 RAL-849 3118 chr3R 10178210 10178232 chr3R 10178337 10178359 7 127 19.5 6.5 13.0 0.5 149 chr3R 10178210 intron CG12814 - chr3R 10178284 intron CG12814 - chr3R 10178359 intron CG12814 - chr3R_7_10175001 chr3R_10175001 RAL-849 3119 chr3R 10196907 10196928 chr3R 10202944 10202965 297 6 6036 12.0 7.5 9.8 0.6 6058 chr3R 10196907 exon Syn + chr3R 10199936 intron Syn + chr3R 10202965 intron Syn + chr3R_6_10195001 chr3R_10195001 RAL-849 3120 chr3R 10231750 10231805 chr3R 10237377 10237432 mdg3 30 5626 7.5 11.0 9.2 2.9 5682 chr3R 10231750 intron CG42795 + chr3R 10234591 intron CG42795 + chr3R 10237432 intron CG42795 + chr3R_30_10230001 chr3R_10230001 RAL-849 3121 chr3R 10231806 10231809 chr3R 10237366 10237436 mdg3 5 5614 7.0 10.0 8.5 0.5 5630 chr3R 10231806 intron CG42795 + chr3R 10234621 intron CG42795 + chr3R 10237436 intron CG42795 + chr3R_5_10230001 chr3R_10230001 RAL-849 3122 chr3R 10255338 10255384 chr3R 10260828 10260874 I-element 20 5488 7.5 12.5 10.0 1.8 5536 chr3R 10255338 intergenic Sirt6 -,CG3999 + chr3R 10258106 intron Sirt6 - chr3R 10260874 exon Sirt6 - chr3R_20_10255001 chr3R_10255001 RAL-849 3123 chr3R 10275556 10275569 chr3R 10275683 10275696 6 127 8.5 17.0 12.8 0.4 140 chr3R 10275556 intron CG43143 + chr3R 10275626 intron CG43143 + chr3R 10275696 intron CG43143 + chr3R_6_10275001 chr3R_10275001 RAL-849 3124 chr3R 10306960 10307029 chr3R 10312169 10312238 33 5210 68.0 56.0 62.0 0.5 5278 chr3R 10306960 exon CG43143 + chr3R 10309599 exon CG6293 - chr3R 10312238 3` UTR Bruce - chr3R_33_10305001 chr3R_10305001 RAL-849 3125 chr3R 10402982 10403062 chr3R 10403113 10403193 31 131 6.5 10.0 8.2 3.4 211 chr3R 10402982 3` UTR CG6325 - chr3R 10403088 3` UTR CG6325 - chr3R 10403193 3` UTR CG6325 - chr3R_31_10400001 chr3R_10400001 RAL-849 3126 chr3R 10417430 10417504 chr3R 10417815 10417889 21 384 7.0 2.5 4.8 3.6 459 chr3R 10417430 intergenic not near genes chr3R 10417660 intergenic not near genes chr3R 10417889 intergenic not near genes chr3R_21_10415001 chr3R_10415001 RAL-849 3127 chr3R 10430750 10430782 chr3R 10431135 10431180 5 393 31.5 33.0 32.2 0.2 430 chr3R 10430750 intergenic not near genes chr3R 10430965 intergenic not near genes chr3R 10431180 intergenic not near genes chr3R_5_10430001 chr3R_10430001 RAL-849 3128 chr3R 10593427 10593452 chr3R 10593564 10593587 5 135 11.5 16.5 14.0 0.3 160 chr3R 10593427 intron hth - chr3R 10593507 intron hth - chr3R 10593587 exon hth - chr3R_5_10590001 chr3R_10590001 RAL-849 3129 chr3R 10641552 10641618 chr3R 10641682 10641748 23 129 7.0 8.0 7.5 2.7 196 chr3R 10641552 5` UTR CR44018 + chr3R 10641650 5` UTR CR44018 + chr3R 10641748 5` UTR CR44018 + chr3R_23_10640001 chr3R_10640001 RAL-849 3130 chr3R 10716387 10716444 chr3R 10716585 10716642 19 197 8.5 9.0 8.8 1.9 255 chr3R 10716387 intergenic CG4073 + chr3R 10716514 intergenic not near genes chr3R 10716642 intergenic not near genes chr3R_19_10715001 chr3R_10715001 RAL-849 3131 chr3R 10723454 10723522 chr3R 10723588 10723656 24 133 6.5 12.5 9.5 2.3 202 chr3R 10723454 intergenic not near genes chr3R 10723555 intergenic not near genes chr3R 10723656 intergenic not near genes chr3R_24_10720001 chr3R_10720001 RAL-849 3132 chr3R 10745378 10745450 chr3R 10745513 10745555 20 132 4.0 4.0 4.0 4.0 177 chr3R 10745378 intron TkR86C - chr3R 10745466 intron TkR86C - chr3R 10745555 intron TkR86C - chr3R_20_10745001 chr3R_10745001 RAL-849 3133 chr3R 10804136 10804193 chr3R 10811718 10811775 17.6 17 7582 2.5 5.5 4.0 3.4 7639 chr3R 10804136 intergenic CG14692 - chr3R 10807956 intergenic not near genes chr3R 10811775 3` UTR CG14693 - chr3R_17_10805001 chr3R_10805001 RAL-849 3134 chr3R 10868546 10868568 chr3R 10868674 10868691 6 126 16.5 9.0 12.8 0.4 145 chr3R 10868546 5` UTR SelR - chr3R 10868618 5` UTR SelR - chr3R 10868691 intergenic Tsp86D +,SelR - chr3R_6_10865001 chr3R_10865001 RAL-849 3135 chr3R 10868590 10868623 chr3R 10868671 10868680 10 103 7.5 9.0 8.2 1.1 90 chr3R 10868590 5` UTR SelR - chr3R 10868635 5` UTR SelR - chr3R 10868680 intergenic Tsp86D +,SelR - chr3R_10_10865001 chr3R_10865001 RAL-849 3136 chr3R 10919642 10919683 chr3R 10919770 10919811 16 128 9.0 2.0 5.5 2.5 169 chr3R 10919642 intergenic not near genes chr3R 10919726 intergenic not near genes chr3R 10919811 intergenic not near genes chr3R_16_10915001 chr3R_10915001 RAL-849 3137 chr3R 10919684 10919714 chr3R 10919763 10919842 9 123 5.0 2.5 3.8 1.9 158 chr3R 10919684 intergenic not near genes chr3R 10919763 intergenic not near genes chr3R 10919842 intergenic not near genes chr3R_9_10915001 chr3R_10915001 RAL-849 3138 chr3R 10920007 10920063 chr3R 10920135 10920191 18 128 7.0 10.0 8.5 1.9 184 chr3R 10920007 intergenic not near genes chr3R 10920099 intergenic not near genes chr3R 10920191 intergenic not near genes chr3R_18_10920001 chr3R_10920001 RAL-849 3139 chr3R 10957815 10957883 chr3R 10963254 10963322 Rt1c 30 5432 7.5 6.0 6.8 3.8 5507 chr3R 10957815 intergenic not near genes chr3R 10960568 intergenic not near genes chr3R 10963322 intergenic not near genes chr3R_30_10960001 chr3R_10960001 RAL-849 3140 chr3R 11056845 11056895 chr3R 11056973 11057020 7 128 9.5 0.5 5.0 1.2 175 chr3R 11056845 intergenic not near genes chr3R 11056932 intergenic not near genes chr3R 11057020 intergenic not near genes chr3R_7_11055001 chr3R_11055001 RAL-849 3141 chr3R 11058500 11058584 chr3R 11058649 11058717 20 138 0.0 6.0 3.0 5.0 217 chr3R 11058500 intergenic not near genes chr3R 11058608 intergenic not near genes chr3R 11058717 intergenic not near genes chr3R_20_11055001 chr3R_11055001 RAL-849 3142 chr3R 11063588 11063637 chr3R 11063719 11063768 10 129 8.5 10.0 9.2 1.0 180 chr3R 11063588 intergenic not near genes chr3R 11063678 intergenic not near genes chr3R 11063768 intergenic not near genes chr3R_10_11060001 chr3R_11060001 RAL-849 3143 chr3R 11078899 11078976 chr3R 11079029 11079076 24 125 10.0 9.0 9.5 2.3 177 chr3R 11078899 intergenic not near genes chr3R 11078988 intergenic not near genes chr3R 11079076 intergenic not near genes chr3R_24_11075001 chr3R_11075001 RAL-849 3144 chr3R 11164300 11164304 chr3R 11164428 11164432 4 128 21.5 6.0 13.8 0.3 132 chr3R 11164300 intergenic Ugt86Dg - chr3R 11164366 intergenic Ugt86Dg - chr3R 11164432 exon Ugt86Dg - chr3R_4_11160001 chr3R_11160001 RAL-849 3145 chr3R 11197957 11198005 chr3R 11198106 11198145 19 148 7.5 10.0 8.8 1.9 188 chr3R 11197957 intron cu + chr3R 11198051 intron cu + chr3R 11198145 intron cu + chr3R_19_11195001 chr3R_11195001 RAL-849 3146 chr3R 11247196 11247221 chr3R 11247327 11247352 INE-1 14 131 11.5 5.5 8.5 1.5 156 chr3R 11247196 intergenic CG5214 +,CR43283 - chr3R 11247274 intergenic CR43283 -,CG5214 + chr3R 11247352 intergenic CR43283 -,CG5214 + chr3R_14_11245001 chr3R_11245001 RAL-849 3147 chr3R 11265892 11265913 chr3R 11266016 11266047 14 131 10.5 16.0 13.2 1.0 155 chr3R 11265892 intergenic not near genes chr3R 11265970 intergenic not near genes chr3R 11266047 intergenic not near genes chr3R_14_11265001 chr3R_11265001 RAL-849 3148 chr3R 11285860 11285920 chr3R 11286096 11286156 22 236 8.5 10.5 9.5 2.1 296 chr3R 11285860 intron CR31386 - chr3R 11286008 intron CR31386 - chr3R 11286156 intron CR31386 - chr3R_22_11285001 chr3R_11285001 RAL-849 3149 chr3R 11303042 11303107 chr3R 11303172 11303199 26 127 13.0 7.5 10.2 2.3 157 chr3R 11303042 intron CR31386 - chr3R 11303120 intron CR31386 - chr3R 11303199 intron CR31386 - chr3R_26_11300001 chr3R_11300001 RAL-849 3150 chr3R 11358301 11358332 chr3R 11358436 11358467 11 133 8.5 8.5 8.5 1.2 166 chr3R 11358301 intron pros + chr3R 11358384 intron pros + chr3R 11358467 intron pros + chr3R_11_11355001 chr3R_11355001 RAL-849 3151 chr3R 11379195 11379225 chr3R 11388400 11388430 roo 15 9205 6.5 6.0 6.2 2.1 9235 chr3R 11379195 intron pros + chr3R 11383812 intron pros + chr3R 11388430 intron pros + chr3R_15_11380001 chr3R_11380001 RAL-849 3152 chr3R 11452026 11452102 chr3R 11452163 11452239 37 136 5.0 8.5 6.8 4.7 213 chr3R 11452026 intron CG17230 + chr3R 11452132 intron CG17230 + chr3R 11452239 intron CG17230 + chr3R_37_11450001 chr3R_11450001 RAL-849 3153 chr3R 11455538 11455602 chr3R 11455714 11455778 21 176 11.5 5.0 8.2 2.3 240 chr3R 11455538 intron,intron CG17230 +,PGRP-LB - chr3R 11455658 intron,intron CG17230 +,PGRP-LB - chr3R 11455778 intron,intron CG17230 +,PGRP-LB - chr3R_21_11455001 chr3R_11455001 RAL-849 3154 chr3R 11460536 11460576 chr3R 11460860 11460906 20 330 5.5 5.5 5.5 3.1 370 chr3R 11460536 intron,exon CG17230 +,PGRP-LB - chr3R 11460721 intron CG17230 + chr3R 11460906 intron CG17230 + chr3R_20_11460001 chr3R_11460001 RAL-849 3155 chr3R 11461219 11461289 chr3R 11461349 11461405 23 127 1.0 4.5 2.8 6.1 186 chr3R 11461219 intron CG17230 + chr3R 11461312 intron CG17230 + chr3R 11461405 intron CG17230 + chr3R_23_11460001 chr3R_11460001 RAL-849 3156 chr3R 11476926 11476971 chr3R 11477081 11477126 19 155 8.5 7.0 7.8 2.2 200 chr3R 11476926 intergenic not near genes chr3R 11477026 intergenic not near genes chr3R 11477126 intergenic not near genes chr3R_19_11475001 chr3R_11475001 RAL-849 3157 chr3R 11490031 11490094 chr3R 11490311 11490374 13 274 2.0 9.0 5.5 2.0 343 chr3R 11490031 intergenic not near genes chr3R 11490202 intergenic not near genes chr3R 11490374 intergenic not near genes chr3R_13_11490001 chr3R_11490001 RAL-849 3158 chr3R 11513825 11513864 chr3R 11513933 11513997 24 126 12.5 8.5 10.5 2.1 172 chr3R 11513825 intergenic not near genes chr3R 11513911 intergenic not near genes chr3R 11513997 intergenic not near genes chr3R_24_11510001 chr3R_11510001 RAL-849 3159 chr3R 11687512 11687588 chr3R 11687656 11687732 33 142 5.5 10.0 7.8 3.7 220 chr3R 11687512 intron CG6834 - chr3R 11687622 intron CG6834 - chr3R 11687732 exon CG6834 - chr3R_33_11685001 chr3R_11685001 RAL-849 3160 chr3R 11708673 11708715 chr3R 11708799 11708842 10 126 5.5 2.0 3.8 2.1 169 chr3R 11708673 intergenic not near genes chr3R 11708758 intergenic not near genes chr3R 11708842 intergenic not near genes chr3R_10_11705001 chr3R_11705001 RAL-849 3161 chr3R 11710170 11710223 chr3R 11710297 11710351 21 127 11.5 7.5 9.5 2.0 181 chr3R 11710170 intergenic not near genes chr3R 11710260 intergenic not near genes chr3R 11710351 intergenic not near genes chr3R_21_11710001 chr3R_11710001 RAL-849 3162 chr3R 11710226 11710232 chr3R 11710289 11710360 7 119 7.5 6.5 7.0 0.9 134 chr3R 11710226 intergenic not near genes chr3R 11710293 intergenic not near genes chr3R 11710360 intergenic not near genes chr3R_7_11710001 chr3R_11710001 RAL-849 3163 chr3R 11734121 11734183 chr3R 11734279 11734352 25 162 8.0 2.5 5.2 4.0 231 chr3R 11734121 intergenic not near genes chr3R 11734236 intergenic not near genes chr3R 11734352 intergenic not near genes chr3R_25_11730001 chr3R_11730001 RAL-849 3164 chr3R 11757698 11757766 chr3R 11757839 11757912 14 141 8.0 7.5 7.8 1.6 214 chr3R 11757698 intron Lk6 - chr3R 11757805 intron Lk6 - chr3R 11757912 intron Lk6 - chr3R_14_11755001 chr3R_11755001 RAL-849 3165 chr3R 11830304 11830352 chr3R 11830438 11830486 18 134 10.0 8.0 9.0 1.8 182 chr3R 11830304 intron CG6959 - chr3R 11830395 intron CG6959 - chr3R 11830486 intron CG6959 - chr3R_18_11830001 chr3R_11830001 RAL-849 3166 chr3R 11840011 11840084 chr3R 11840158 11840224 15 141 8.5 4.5 6.5 2.0 213 chr3R 11840011 intron CG6959 - chr3R 11840118 intron CG6959 - chr3R 11840224 intron CG6959 - chr3R_15_11840001 chr3R_11840001 RAL-849 3167 chr3R 11841018 11841089 chr3R 11846259 11846330 BS 33 5238 8.0 11.5 9.8 3.1 5312 chr3R 11841018 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846330 intron CG6959 - chr3R_33_11840001 chr3R_11840001 RAL-849 3168 chr3R 11853415 11853472 chr3R 11853629 11853664 14 211 7.5 9.0 8.2 1.5 249 chr3R 11853415 intron CG6959 - chr3R 11853540 intron CG6959 - chr3R 11853664 intron CG6959 - chr3R_14_11850001 chr3R_11850001 RAL-849 3169 chr3R 11909317 11909334 chr3R 11909447 11909464 7 130 23.0 11.5 17.2 0.4 147 chr3R 11909317 intron Cad87A - chr3R 11909390 intron Cad87A - chr3R 11909464 intron Cad87A - chr3R_7_11905001 chr3R_11905001 RAL-849 3170 chr3R 11909338 11909349 chr3R 11909445 11909452 5 116 19.0 10.5 14.8 0.3 114 chr3R 11909338 intron Cad87A - chr3R 11909395 intron Cad87A - chr3R 11909452 intron Cad87A - chr3R_5_11905001 chr3R_11905001 RAL-849 3171 chr3R 11909350 11909391 chr3R 11909439 11909478 17 112 12.0 11.5 11.8 1.3 128 chr3R 11909350 intron Cad87A - chr3R 11909414 intron Cad87A - chr3R 11909478 intron Cad87A - chr3R_17_11905001 chr3R_11905001 RAL-849 3172 chr3R 11945337 11945406 chr3R 11945485 11945554 21 148 7.5 4.5 6.0 3.0 217 chr3R 11945337 intron Cad87A - chr3R 11945446 intron Cad87A - chr3R 11945554 intron Cad87A - chr3R_21_11945001 chr3R_11945001 RAL-849 3173 chr3R 11957809 11957880 chr3R 11958142 11958213 S-element 14 331 2.5 2.0 2.2 4.4 404 chr3R 11957809 intergenic not near genes chr3R 11958011 intergenic not near genes chr3R 11958213 intergenic not near genes chr3R_14_11955001 chr3R_11955001 RAL-849 3174 chr3R 11994960 11995021 chr3R 11995080 11995126 18 121 5.5 10.5 8.0 2.0 166 chr3R 11994960 intron Tk - chr3R 11995043 exon Tk - chr3R 11995126 exon Tk - chr3R_18_11995001 chr3R_11995001 RAL-849 3175 chr3R 12016993 12017022 chr3R 12017120 12017149 16 125 8.0 16.0 12.0 1.2 156 chr3R 12016993 5` UTR CG3313 - chr3R 12017071 intergenic CG3313 -,Spt3 + chr3R 12017149 intergenic Spt3 +,CG3313 - chr3R_16_12015001 chr3R_12015001 RAL-849 3176 chr3R 12022845 12022908 chr3R 12025072 12025135 pogo 24 2227 5.0 10.5 7.8 2.7 2290 chr3R 12022845 intergenic not near genes chr3R 12023990 intergenic not near genes chr3R 12025135 intergenic not near genes chr3R_24_12020001 chr3R_12020001 RAL-849 3177 chr3R 12037270 12037288 chr3R 12037577 12037595 12 307 7.0 7.5 7.2 1.5 325 chr3R 12037270 intergenic not near genes chr3R 12037432 intergenic not near genes chr3R 12037595 intergenic not near genes chr3R_12_12035001 chr3R_12035001 RAL-849 3178 chr3R 12080827 12080867 chr3R 12080941 12080995 10 125 10.0 5.0 7.5 1.2 168 chr3R 12080827 intron CG14741 - chr3R 12080911 intron CG14741 - chr3R 12080995 intron CG14741 - chr3R_10_12080001 chr3R_12080001 RAL-849 3179 chr3R 12080876 12080891 chr3R 12080991 12081019 9 125 7.0 11.5 9.2 0.9 143 chr3R 12080876 intron CG14741 - chr3R 12080948 intron CG14741 - chr3R 12081019 intron CG14741 - chr3R_9_12080001 chr3R_12080001 RAL-849 3180 chr3R 12097196 12097270 chr3R 12097350 12097424 25 154 6.0 7.5 6.8 3.2 228 chr3R 12097196 intron dpr17 + chr3R 12097310 intron dpr17 + chr3R 12097424 intron dpr17 + chr3R_25_12095001 chr3R_12095001 RAL-849 3181 chr3R 12102831 12102873 chr3R 12102976 12103018 10 144 13.5 10.0 11.8 0.8 187 chr3R 12102831 intron dpr17 + chr3R 12102924 intron dpr17 + chr3R 12103018 intron dpr17 + chr3R_10_12100001 chr3R_12100001 RAL-849 3182 chr3R 12111845 12111921 chr3R 12111971 12112047 22 125 5.0 2.0 3.5 4.9 202 chr3R 12111845 intergenic dpr17 + chr3R 12111946 intergenic not near genes chr3R 12112047 intergenic not near genes chr3R_22_12110001 chr3R_12110001 RAL-849 3183 chr3R 12112286 12112363 chr3R 12112431 12112499 28 135 4.0 3.0 3.5 6.2 213 chr3R 12112286 intergenic not near genes chr3R 12112392 intergenic not near genes chr3R 12112499 intergenic not near genes chr3R_28_12110001 chr3R_12110001 RAL-849 3184 chr3R 12117479 12117516 chr3R 12117918 12117955 11 439 9.0 8.0 8.5 1.2 476 chr3R 12117479 intergenic not near genes chr3R 12117717 intergenic not near genes chr3R 12117955 intergenic not near genes chr3R_11_12115001 chr3R_12115001 RAL-849 3185 chr3R 12117517 12117544 chr3R 12117905 12117983 11 425 4.5 5.5 5.0 1.8 466 chr3R 12117517 intergenic not near genes chr3R 12117750 intergenic not near genes chr3R 12117983 intergenic not near genes chr3R_11_12115001 chr3R_12115001 RAL-849 3186 chr3R 12119837 12119900 chr3R 12119976 12120045 22 142 4.5 9.0 6.8 2.8 208 chr3R 12119837 intergenic not near genes chr3R 12119941 intergenic not near genes chr3R 12120045 intergenic not near genes chr3R_22_12115001 chr3R_12115001 RAL-849 3187 chr3R 12169188 12169222 chr3R 12169316 12169350 7 128 9.5 6.5 8.0 0.8 162 chr3R 12169188 intergenic not near genes chr3R 12169269 intergenic not near genes chr3R 12169350 intergenic not near genes chr3R_7_12165001 chr3R_12165001 RAL-849 3188 chr3R 12183136 12183149 chr3R 12183271 12183285 7 136 11.5 5.0 8.2 0.8 149 chr3R 12183136 intergenic not near genes chr3R 12183210 intergenic not near genes chr3R 12183285 intergenic not near genes chr3R_7_12180001 chr3R_12180001 RAL-849 3189 chr3R 12183163 12183170 chr3R 12183299 12183306 4 136 8.5 9.5 9.0 0.4 143 chr3R 12183163 intergenic not near genes chr3R 12183234 intergenic not near genes chr3R 12183306 intergenic not near genes chr3R_4_12180001 chr3R_12180001 RAL-849 3190 chr3R 12183171 12183190 chr3R 12183273 12183326 6 130 6.5 5.0 5.8 0.9 155 chr3R 12183171 intergenic not near genes chr3R 12183248 intergenic not near genes chr3R 12183326 intergenic not near genes chr3R_6_12180001 chr3R_12180001 RAL-849 3191 chr3R 12267821 12267880 chr3R 12267951 12268010 22 130 6.5 7.0 6.8 2.8 189 chr3R 12267821 intron svp + chr3R 12267916 intron svp + chr3R 12268010 intron svp + chr3R_22_12265001 chr3R_12265001 RAL-849 3192 chr3R 12297615 12297645 chr3R 12297737 12297772 14 120 17.5 25.5 21.5 0.6 157 chr3R 12297615 intron svp + chr3R 12297694 intron svp + chr3R 12297772 intron svp + chr3R_14_12295001 chr3R_12295001 RAL-849 3193 chr3R 12307761 12307803 chr3R 12307881 12307902 20 126 3.0 13.0 8.0 2.2 141 chr3R 12307761 intergenic not near genes chr3R 12307832 intergenic not near genes chr3R 12307902 intergenic not near genes chr3R_20_12305001 chr3R_12305001 RAL-849 3194 chr3R 12383826 12383857 chr3R 12383975 12384006 15 149 0.0 10.0 5.0 2.5 180 chr3R 12383826 intron GstD11 + chr3R 12383916 intron GstD11 + chr3R 12384006 intron GstD11 + chr3R_15_12380001 chr3R_12380001 RAL-849 3195 chr3R 12392841 12392894 chr3R 12392991 12393041 25 148 10.0 17.0 13.5 1.7 200 chr3R 12392841 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392941 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393041 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_25_12390001 chr3R_12390001 RAL-849 3196 chr3R 12546411 12546479 chr3R 12546544 12546612 34 133 10.5 8.5 9.5 3.2 201 chr3R 12546411 intron Octbeta3R - chr3R 12546512 intron Octbeta3R - chr3R 12546612 intron Octbeta3R - chr3R_34_12545001 chr3R_12545001 RAL-849 3197 chr3R 12599333 12599401 chr3R 12599466 12599534 20 132 4.5 6.5 5.5 3.1 201 chr3R 12599333 intergenic not near genes chr3R 12599434 intergenic not near genes chr3R 12599534 intergenic not near genes chr3R_20_12595001 chr3R_12595001 RAL-849 3198 chr3R 12628569 12628594 chr3R 12628702 12628727 11 131 19.5 11.5 15.5 0.7 158 chr3R 12628569 intron Snx3 + chr3R 12628648 intron Snx3 + chr3R 12628727 intron Snx3 + chr3R_11_12625001 chr3R_12625001 RAL-849 3199 chr3R 12628599 12628627 chr3R 12628701 12628707 10 115 13.5 11.0 12.2 0.8 108 chr3R 12628599 intron Snx3 + chr3R 12628653 intron Snx3 + chr3R 12628707 intron Snx3 + chr3R_10_12625001 chr3R_12625001 RAL-849 3200 chr3R 12706472 12706484 chr3R 12715734 12715752 8 9263 67.5 58.0 62.8 0.1 9280 chr3R 12706472 exon mus308 - chr3R 12711112 exon mus308 - chr3R 12715752 intron Men - chr3R_8_12710001 chr3R_12710001 RAL-849 3201 chr3R 12706470 12706504 chr3R 12715758 12715798 20 9268 69.5 54.0 61.8 0.3 9328 chr3R 12706470 exon mus308 - chr3R 12711134 exon mus308 - chr3R 12715798 intron Men - chr3R_20_12710001 chr3R_12710001 RAL-849 3202 chr3R 12725914 12725969 chr3R 12726048 12726124 13 134 7.5 6.0 6.8 1.7 210 chr3R 12725914 intergenic not near genes chr3R 12726019 intergenic not near genes chr3R 12726124 intergenic not near genes chr3R_13_12725001 chr3R_12725001 RAL-849 3203 chr3R 12728405 12728416 chr3R 12728755 12728763 7 351 19.5 11.5 15.5 0.4 358 chr3R 12728405 5` UTR CR44231 + chr3R 12728584 intergenic CR44231 + chr3R 12728763 intergenic CR44231 + chr3R_7_12725001 chr3R_12725001 RAL-849 3204 chr3R 12728417 12728436 chr3R 12728754 12728779 9 347 13.5 11.5 12.5 0.7 362 chr3R 12728417 5` UTR CR44231 + chr3R 12728598 intergenic CR44231 + chr3R 12728779 intergenic CR44231 + chr3R_9_12725001 chr3R_12725001 RAL-849 3205 chr3R 12728437 12728477 chr3R 12728749 12728794 17 327 5.5 9.0 7.2 2.1 357 chr3R 12728437 5` UTR CR44231 + chr3R 12728616 intergenic CR44231 + chr3R 12728794 intergenic CR44231 + chr3R_17_12725001 chr3R_12725001 RAL-849 3206 chr3R 12735134 12735182 chr3R 12735434 12735482 15 300 6.0 9.5 7.8 1.7 348 chr3R 12735134 intergenic not near genes chr3R 12735308 intergenic not near genes chr3R 12735482 intergenic not near genes chr3R_15_12735001 chr3R_12735001 RAL-849 3207 chr3R 12787903 12787933 chr3R 12788036 12788066 15 133 12.0 6.0 9.0 1.5 163 chr3R 12787903 intergenic not near genes chr3R 12787984 intergenic not near genes chr3R 12788066 intergenic not near genes chr3R_15_12785001 chr3R_12785001 RAL-849 3208 chr3R 12818985 12819045 chr3R 12819118 12819179 14 133 7.0 5.5 6.2 1.9 194 chr3R 12818985 intergenic not near genes chr3R 12819082 intergenic not near genes chr3R 12819179 intergenic not near genes chr3R_14_12815001 chr3R_12815001 RAL-849 3209 chr3R 12866440 12866509 chr3R 12866641 12866710 23 201 8.5 6.5 7.5 2.7 270 chr3R 12866440 intergenic not near genes chr3R 12866575 intergenic not near genes chr3R 12866710 intergenic not near genes chr3R_23_12865001 chr3R_12865001 RAL-849 3210 chr3R 12920132 12920169 chr3R 12925360 12925396 copia 16 5249 5.0 6.5 5.8 2.4 5264 chr3R 12920132 intron beat-Vb + chr3R 12922764 intron beat-Vb + chr3R 12925396 intron beat-Vb + chr3R_16_12920001 chr3R_12920001 RAL-849 3211 chr3R 12926678 12926749 chr3R 12926838 12926910 21 161 5.0 4.5 4.8 3.6 232 chr3R 12926678 intron beat-Vb + chr3R 12926794 intron beat-Vb + chr3R 12926910 intron beat-Vb + chr3R_21_12925001 chr3R_12925001 RAL-849 3212 chr3R 12943929 12944002 chr3R 12944066 12944139 24 137 5.0 5.5 5.2 3.9 210 chr3R 12943929 intergenic not near genes chr3R 12944034 intergenic not near genes chr3R 12944139 intergenic not near genes chr3R_24_12940001 chr3R_12940001 RAL-849 3213 chr3R 12952238 12952244 chr3R 12952413 12952415 4 174 14.5 6.5 10.5 0.3 177 chr3R 12952238 intron grsm - chr3R 12952326 intron grsm - chr3R 12952415 intron grsm - chr3R_4_12950001 chr3R_12950001 RAL-849 3214 chr3R 12952246 12952307 chr3R 12952411 12952476 24 171 4.0 6.5 5.2 3.9 230 chr3R 12952246 intron grsm - chr3R 12952361 intron grsm - chr3R 12952476 intron grsm - chr3R_24_12950001 chr3R_12950001 RAL-849 3215 chr3R 12974242 12974313 chr3R 12974381 12974451 32 137 9.0 5.0 7.0 4.0 209 chr3R 12974242 intron CG7381 - chr3R 12974346 intron CG7381 - chr3R 12974451 intron CG7381 - chr3R_32_12970001 chr3R_12970001 RAL-849 3216 chr3R 13075315 13075375 chr3R 13075446 13075506 19 131 12.0 8.5 10.2 1.7 191 chr3R 13075315 intron sim + chr3R 13075410 intron sim + chr3R 13075506 intron sim + chr3R_19_13075001 chr3R_13075001 RAL-849 3217 chr3R 13132606 13132669 chr3R 13132733 13132798 15 124 10.5 11.5 11.0 1.2 192 chr3R 13132606 intron,5` UTR,3` UTR timeout +,2mit -,CR45109 - chr3R 13132702 intron,5` UTR,3` UTR timeout +,2mit -,CR45109 - chr3R 13132798 intron,5` UTR,3` UTR timeout +,2mit -,CR45109 - chr3R_15_13130001 chr3R_13130001 RAL-849 3218 chr3R 13135786 13135836 chr3R 13138001 13138051 pogo 14 2215 7.5 3.5 5.5 2.2 2265 chr3R 13135786 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136918 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138051 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_14_13135001 chr3R_13135001 RAL-849 3219 chr3R 13142989 13143062 chr3R 13148615 13148688 mdg3 31 5624 5.0 7.0 6.0 4.4 5699 chr3R 13142989 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145838 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148688 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_31_13145001 chr3R_13145001 RAL-849 3220 chr3R 13191475 13191549 chr3R 13191609 13191682 9 134 3.5 0.0 1.8 3.2 207 chr3R 13191475 intergenic CG8141 + chr3R 13191578 intergenic CG8141 + chr3R 13191682 5` UTR CG8141 + chr3R_9_13190001 chr3R_13190001 RAL-849 3221 chr3R 13195907 13195983 chr3R 13196052 13196115 26 141 6.0 9.0 7.5 3.1 208 chr3R 13195907 intergenic not near genes chr3R 13196011 intergenic not near genes chr3R 13196115 intergenic not near genes chr3R_26_13195001 chr3R_13195001 RAL-849 3222 chr3R 13206602 13206674 chr3R 13206889 13206936 27 282 4.0 5.0 4.5 4.9 334 chr3R 13206602 intergenic not near genes chr3R 13206769 intergenic not near genes chr3R 13206936 intergenic not near genes chr3R_27_13205001 chr3R_13205001 RAL-849 3223 chr3R 13311551 13311644 chr3R 13318883 13318945 Doc 5 7324 46.0 5.0 25.5 0.2 7394 chr3R 13311551 exon CG32473 + chr3R 13315248 intergenic not near genes chr3R 13318945 intergenic CG45080 - chr3R_5_13315001 chr3R_13315001 RAL-849 3224 chr3R 13363184 13363223 chr3R 13363317 13363356 8 133 12.5 6.0 9.2 0.8 172 chr3R 13363184 intron poly - chr3R 13363270 intron poly - chr3R 13363356 intron poly - chr3R_8_13360001 chr3R_13360001 RAL-849 3225 chr3R 13420951 13420981 chr3R 13421096 13421115 14 144 15.5 13.0 14.2 0.9 164 chr3R 13420951 exon Ir87a + chr3R 13421033 exon Ir87a + chr3R 13421115 exon Ir87a + chr3R_14_13420001 chr3R_13420001 RAL-849 3226 chr3R 13435177 13435417 chr3R 13435362 13435642 36 209 0.0 0.0 0.0 36.0 465 chr3R 13435177 intergenic yrt - chr3R 13435410 intergenic yrt - chr3R 13435642 intergenic not near genes chr3R_36_13435001 chr3R_13435001 RAL-849 3227 chr3R 13439529 13439592 chr3R 13439661 13439699 17 131 7.0 4.5 5.8 2.5 170 chr3R 13439529 intergenic CR42756 - chr3R 13439614 intergenic CR42756 - chr3R 13439699 intergenic CR42756 - chr3R_17_13435001 chr3R_13435001 RAL-849 3228 chr3R 13441012 13441057 chr3R 13441325 13441363 24 312 8.5 12.5 10.5 2.1 351 chr3R 13441012 intergenic not near genes chr3R 13441188 intergenic not near genes chr3R 13441363 intergenic not near genes chr3R_24_13440001 chr3R_13440001 RAL-849 3229 chr3R 13441062 13441075 chr3R 13441324 13441388 12 305 5.5 12.5 9.0 1.2 326 chr3R 13441062 intergenic not near genes chr3R 13441225 intergenic not near genes chr3R 13441388 intergenic not near genes chr3R_12_13440001 chr3R_13440001 RAL-849 3230 chr3R 13450027 13450103 chr3R 13450228 13450273 21 197 7.5 6.0 6.8 2.7 246 chr3R 13450027 intergenic not near genes chr3R 13450150 intergenic CG14372 + chr3R 13450273 intergenic CG14372 + chr3R_21_13450001 chr3R_13450001 RAL-849 3231 chr3R 13554105 13554108 chr3R 13554234 13554237 4 129 22.5 13.5 18.0 0.2 132 chr3R 13554105 intergenic not near genes chr3R 13554171 intergenic not near genes chr3R 13554237 intergenic not near genes chr3R_4_13550001 chr3R_13550001 RAL-849 3232 chr3R 13554109 13554165 chr3R 13554233 13554294 11 126 11.5 13.5 12.5 0.8 185 chr3R 13554109 intergenic not near genes chr3R 13554202 intergenic not near genes chr3R 13554294 intergenic not near genes chr3R_11_13550001 chr3R_13550001 RAL-849 3233 chr3R 13558015 13558050 chr3R 13558273 13558308 13 256 16.5 8.5 12.5 1.0 293 chr3R 13558015 intergenic not near genes chr3R 13558162 intergenic not near genes chr3R 13558308 intergenic not near genes chr3R_13_13555001 chr3R_13555001 RAL-849 3234 chr3R 13599171 13599241 chr3R 13599332 13599402 13 161 2.0 7.0 4.5 2.4 231 chr3R 13599171 intergenic not near genes chr3R 13599286 intergenic not near genes chr3R 13599402 intergenic not near genes chr3R_13_13595001 chr3R_13595001 RAL-849 3235 chr3R 13603013 13603074 chr3R 13603154 13603215 23 141 10.5 10.5 10.5 2.0 202 chr3R 13603013 intergenic not near genes chr3R 13603114 intergenic not near genes chr3R 13603215 intergenic not near genes chr3R_23_13600001 chr3R_13600001 RAL-849 3236 chr3R 13625647 13625718 chr3R 13625778 13625849 13 131 7.0 5.5 6.2 1.8 202 chr3R 13625647 intergenic not near genes chr3R 13625748 intergenic not near genes chr3R 13625849 intergenic not near genes chr3R_13_13625001 chr3R_13625001 RAL-849 3237 chr3R 13659737 13659841 chr3R 13659929 13659979 11 158 0.0 0.0 0.0 11.0 242 chr3R 13659737 intron Hrb87F - chr3R 13659858 intron Hrb87F - chr3R 13659979 intron Hrb87F - chr3R_11_13655001 chr3R_13655001 RAL-849 3238 chr3R 13672898 13672968 chr3R 13673024 13673096 39 126 10.0 12.0 11.0 3.2 198 chr3R 13672898 intron Task6 - chr3R 13672997 intron Task6 - chr3R 13673096 intron Task6 - chr3R_39_13670001 chr3R_13670001 RAL-849 3239 chr3R 13693028 13693028 chr3R 21907535 21907536 5 8214507 32.5 36.5 34.5 0.1 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_5_17800001 chr3R_17800001 RAL-849 3240 chr3R 13736009 13736050 chr3R 13736149 13736190 18 139 11.0 2.0 6.5 2.4 181 chr3R 13736009 intron CG34383 + chr3R 13736100 intron CG34383 + chr3R 13736190 intron CG34383 + chr3R_18_13735001 chr3R_13735001 RAL-849 3241 chr3R 13736051 13736080 chr3R 13736146 13736220 7 133 8.0 2.0 5.0 1.2 169 chr3R 13736051 intron CG34383 + chr3R 13736136 intron CG34383 + chr3R 13736220 intron CG34383 + chr3R_7_13735001 chr3R_13735001 RAL-849 3242 chr3R 13745381 13745442 chr3R 13745549 13745610 16 165 6.5 7.0 6.8 2.1 229 chr3R 13745381 intron CG34383 + chr3R 13745496 intron CG34383 + chr3R 13745610 intron CG34383 + chr3R_16_13745001 chr3R_13745001 RAL-849 3243 chr3R 13758130 13758167 chr3R 13758266 13758303 4 136 0.0 12.0 6.0 0.6 173 chr3R 13758130 intron CG34383 + chr3R 13758216 intron CG34383 + chr3R 13758303 intron CG34383 + chr3R_4_13755001 chr3R_13755001 RAL-849 3244 chr3R 13830196 13830211 chr3R 13830338 13830353 7 142 4.5 16.0 10.2 0.6 157 chr3R 13830196 intergenic not near genes chr3R 13830274 intergenic not near genes chr3R 13830353 intergenic not near genes chr3R_7_13830001 chr3R_13830001 RAL-849 3245 chr3R 13927211 13927224 chr3R 13927351 13927364 7 140 3.5 2.0 2.8 1.8 153 chr3R 13927211 intergenic not near genes chr3R 13927288 intergenic not near genes chr3R 13927364 intergenic not near genes chr3R_7_13925001 chr3R_13925001 RAL-849 3246 chr3R 13948202 13948250 chr3R 13948330 13948378 20 127 5.5 8.5 7.0 2.5 176 chr3R 13948202 intergenic CG31517 + chr3R 13948290 intergenic CG31517 + chr3R 13948378 intergenic CG31517 + chr3R_20_13945001 chr3R_13945001 RAL-849 3247 chr3R 13980898 13980913 chr3R 13981074 13981089 8 176 0.0 19.5 9.8 0.7 191 chr3R 13980898 intron rdx - chr3R 13980994 intron rdx - chr3R 13981089 intron rdx - chr3R_8_13980001 chr3R_13980001 RAL-849 3248 chr3R 13984517 13984591 chr3R 13984662 13984715 32 143 3.5 7.5 5.5 4.9 198 chr3R 13984517 intron rdx - chr3R 13984616 intron rdx - chr3R 13984715 intron rdx - chr3R_32_13980001 chr3R_13980001 RAL-849 3249 chr3R 14021606 14021678 chr3R 14023473 14023543 S-element 34 1866 9.0 8.0 8.5 3.6 1937 chr3R 14021606 intron rdx - chr3R 14022574 intron rdx - chr3R 14023543 intron rdx - chr3R_34_14020001 chr3R_14020001 RAL-849 3250 chr3R 14037542 14037582 chr3R 14037670 14037713 16 128 8.5 8.5 8.5 1.7 171 chr3R 14037542 intergenic not near genes chr3R 14037628 intergenic not near genes chr3R 14037713 intergenic not near genes chr3R_16_14035001 chr3R_14035001 RAL-849 3251 chr3R 14067092 14067152 chr3R 14067221 14067281 21 129 5.5 5.0 5.2 3.4 189 chr3R 14067092 exon foxo + chr3R 14067186 intron foxo + chr3R 14067281 intron foxo + chr3R_21_14065001 chr3R_14065001 RAL-849 3252 chr3R 14109037 14109081 chr3R 14109168 14109212 11 131 9.5 0.0 4.8 1.9 175 chr3R 14109037 intergenic CR44237 -,Or88a + chr3R 14109124 intergenic CR44237 -,Or88a + chr3R 14109212 intergenic CR44237 -,Or88a + chr3R_11_14105001 chr3R_14105001 RAL-849 3253 chr3R 14166684 14166701 chr3R 14167368 14167376 8 691 12.0 22.5 17.2 0.4 692 chr3R 14166684 3` UTR Dop1R1 - chr3R 14167030 3` UTR Dop1R1 - chr3R 14167376 3` UTR Dop1R1 - chr3R_8_14165001 chr3R_14165001 RAL-849 3254 chr3R 14180767 14180830 chr3R 14185582 14185645 F-element 8 4815 5.0 6.5 5.8 1.2 4878 chr3R 14180767 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185645 intron Dop1R1 - chr3R_8_14180001 chr3R_14180001 RAL-849 3255 chr3R 14194437 14194460 chr3R 14203616 14203639 roo 12 9179 9.0 5.5 7.2 1.5 9202 chr3R 14194437 intron Dop1R1 - chr3R 14199038 intron Dop1R1 - chr3R 14203639 intron Dop1R1 - chr3R_12_14195001 chr3R_14195001 RAL-849 3256 chr3R 14246351 14246360 chr3R 14247897 14247901 jockey 6 1544 23.0 7.0 15.0 0.4 1550 chr3R 14246351 intergenic not near genes chr3R 14247126 intergenic not near genes chr3R 14247901 intergenic not near genes chr3R_6_14245001 chr3R_14245001 RAL-849 3257 chr3R 14246366 14246418 chr3R 14247896 14247964 jockey 28 1541 11.0 7.0 9.0 2.8 1598 chr3R 14246366 intergenic not near genes chr3R 14247165 intergenic not near genes chr3R 14247964 intergenic not near genes chr3R_28_14245001 chr3R_14245001 RAL-849 3258 chr3R 14248685 14248705 chr3R 14248813 14248833 7 128 13.5 2.0 7.8 0.8 148 chr3R 14248685 intergenic not near genes chr3R 14248759 intergenic not near genes chr3R 14248833 intergenic not near genes chr3R_7_14245001 chr3R_14245001 RAL-849 3259 chr3R 14248717 14248738 chr3R 14248810 14248866 5 121 5.0 2.0 3.5 1.1 149 chr3R 14248717 intergenic not near genes chr3R 14248792 intergenic not near genes chr3R 14248866 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-849 3260 chr3R 14256728 14256761 chr3R 14256864 14256897 11 136 7.0 12.5 9.8 1.0 169 chr3R 14256728 intron,exon Aats-met -,CG43179 + chr3R 14256812 intron,3` UTR Aats-met -,CG43179 + chr3R 14256897 intron,3` UTR Aats-met -,CG43179 + chr3R_11_14255001 chr3R_14255001 RAL-849 3261 chr3R 14280648 14280692 chr3R 14280770 14280819 14 125 10.0 4.0 7.0 1.8 171 chr3R 14280648 intron trx - chr3R 14280734 intron trx - chr3R 14280819 intron trx - chr3R_14_14280001 chr3R_14280001 RAL-849 3262 chr3R 14426013 14426081 chr3R 14426167 14426230 31 152 10.5 7.5 9.0 3.1 217 chr3R 14426013 intron cv-c - chr3R 14426122 intron cv-c - chr3R 14426230 intron cv-c - chr3R_31_14425001 chr3R_14425001 RAL-849 3263 chr3R 14504969 14504993 chr3R 14505095 14505104 roo 8 124 14.5 15.5 15.0 0.5 135 chr3R 14504969 intron CR44177 + chr3R 14505036 intron CR44177 + chr3R 14505104 intron CR44177 + chr3R_8_14505001 chr3R_14505001 RAL-849 3264 chr3R 14543552 14543626 chr3R 14543682 14543756 19 130 9.5 7.0 8.2 2.1 204 chr3R 14543552 intron Pde6 - chr3R 14543654 intron Pde6 - chr3R 14543756 intron Pde6 - chr3R_19_14540001 chr3R_14540001 RAL-849 3265 chr3R 14546005 14546056 chr3R 14546117 14546183 10 125 13.0 2.0 7.5 1.2 178 chr3R 14546005 intron Pde6 - chr3R 14546094 intron Pde6 - chr3R 14546183 intron Pde6 - chr3R_10_14545001 chr3R_14545001 RAL-849 3266 chr3R 14608426 14608472 chr3R 14608568 14608614 14 141 5.0 6.0 5.5 2.2 188 chr3R 14608426 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608614 intergenic not near genes chr3R_14_14605001 chr3R_14605001 RAL-849 3267 chr3R 14656738 14656744 chr3R 14657265 14657271 4 527 27.0 6.5 16.8 0.2 533 chr3R 14656738 intergenic not near genes chr3R 14657004 intergenic CG3505 + chr3R 14657271 intergenic CG3505 + chr3R_4_14655001 chr3R_14655001 RAL-849 3268 chr3R 14656745 14656811 chr3R 14657262 14657338 28 525 5.0 6.5 5.8 4.1 593 chr3R 14656745 intergenic not near genes chr3R 14657042 intergenic CG3505 + chr3R 14657338 intergenic CG3505 + chr3R_28_14655001 chr3R_14655001 RAL-849 3269 chr3R 14704340 14704415 chr3R 14704467 14704505 24 123 11.0 9.0 10.0 2.2 165 chr3R 14704340 intron kibra - chr3R 14704422 intron kibra - chr3R 14704505 intron kibra - chr3R_24_14700001 chr3R_14700001 RAL-849 3270 chr3R 14709277 14709285 chr3R 14709410 14709416 4 132 18.5 3.5 11.0 0.3 139 chr3R 14709277 intron kibra - chr3R 14709346 intron kibra - chr3R 14709416 intron kibra - chr3R_4_14705001 chr3R_14705001 RAL-849 3271 chr3R 14709288 14709342 chr3R 14709403 14709475 23 131 4.5 2.5 3.5 5.1 187 chr3R 14709288 intron kibra - chr3R 14709382 intron kibra - chr3R 14709475 intron kibra - chr3R_23_14705001 chr3R_14705001 RAL-849 3272 chr3R 14773462 14773475 chr3R 14773593 14773606 6 131 9.5 2.0 5.8 0.9 144 chr3R 14773462 intron jvl + chr3R 14773534 intron jvl + chr3R 14773606 intron jvl + chr3R_6_14770001 chr3R_14770001 RAL-849 3273 chr3R 14775988 14776027 chr3R 14776129 14776162 13 141 8.0 10.0 9.0 1.3 174 chr3R 14775988 intron jvl + chr3R 14776075 intron jvl + chr3R 14776162 intron jvl + chr3R_13_14775001 chr3R_14775001 RAL-849 3274 chr3R 14787084 14787140 chr3R 14787548 14787598 19 462 11.5 8.5 10.0 1.7 514 chr3R 14787084 intron jvl + chr3R 14787341 intron jvl + chr3R 14787598 intron jvl + chr3R_19_14785001 chr3R_14785001 RAL-849 3275 chr3R 14836648 14836723 chr3R 14836783 14836858 28 135 6.5 11.5 9.0 2.8 210 chr3R 14836648 intron btsz - chr3R 14836753 intron btsz - chr3R 14836858 intron btsz - chr3R_28_14835001 chr3R_14835001 RAL-849 3276 chr3R 14853324 14853336 chr3R 14853450 14853463 4 127 3.5 4.5 4.0 0.8 139 chr3R 14853324 intron btsz - chr3R 14853394 intron btsz - chr3R 14853463 intron btsz - chr3R_4_14850001 chr3R_14850001 RAL-849 3277 chr3R 14898443 14898501 chr3R 14898613 14898671 18 170 4.5 4.5 4.5 3.3 228 chr3R 14898443 intergenic Nup93-2 -,CG3817 + chr3R 14898557 intergenic CG3817 +,Nup93-2 - chr3R 14898671 intergenic CG3817 +,Nup93-2 - chr3R_18_14895001 chr3R_14895001 RAL-849 3278 chr3R 14944850 14944896 chr3R 14944981 14945027 17 130 10.0 8.5 9.2 1.7 177 chr3R 14944850 intergenic not near genes chr3R 14944938 intergenic not near genes chr3R 14945027 intergenic not near genes chr3R_17_14940001 chr3R_14940001 RAL-849 3279 chr3R 14950288 14950362 chr3R 14950425 14950497 10 135 2.5 0.0 1.2 4.5 209 chr3R 14950288 intergenic not near genes chr3R 14950392 intergenic not near genes chr3R 14950497 intergenic not near genes chr3R_10_14950001 chr3R_14950001 RAL-849 3280 chr3R 14952151 14952220 chr3R 14952351 14952420 22 200 8.5 10.0 9.2 2.2 269 chr3R 14952151 intergenic not near genes chr3R 14952286 intergenic not near genes chr3R 14952420 intergenic not near genes chr3R_22_14950001 chr3R_14950001 RAL-849 3281 chr3R 14972232 14972275 chr3R 14973023 14973066 17 791 0.0 8.0 4.0 3.4 834 chr3R 14972232 intergenic not near genes chr3R 14972649 intergenic not near genes chr3R 14973066 intergenic not near genes chr3R_17_14970001 chr3R_14970001 RAL-849 3282 chr3R 15010280 15010350 chr3R 15010571 15010640 9 291 3.5 4.5 4.0 1.8 360 chr3R 15010280 intergenic not near genes chr3R 15010460 intergenic not near genes chr3R 15010640 intergenic not near genes chr3R_9_15010001 chr3R_15010001 RAL-849 3283 chr3R 15026280 15026337 chr3R 15026416 15026473 16 133 4.0 4.0 4.0 3.2 193 chr3R 15026280 intergenic not near genes chr3R 15026376 intergenic not near genes chr3R 15026473 intergenic not near genes chr3R_16_15025001 chr3R_15025001 RAL-849 3284 chr3R 15041392 15041449 chr3R 15045210 15045267 Doc 15 3818 3.0 11.0 7.0 1.9 3875 chr3R 15041392 intergenic not near genes chr3R 15043330 intergenic not near genes chr3R 15045267 intergenic not near genes chr3R_15_15040001 chr3R_15040001 RAL-849 3285 chr3R 15059270 15059481 chr3R 15059548 15059618 BS 18 231 0.0 4.5 2.2 5.6 348 chr3R 15059270 intron dpr9 - chr3R 15059444 intron dpr9 - chr3R 15059618 intron dpr9 - chr3R_18_15055001 chr3R_15055001 RAL-849 3286 chr3R 15075184 15075252 chr3R 15075318 15075386 17 134 7.0 0.0 3.5 3.8 202 chr3R 15075184 intron dpr9 - chr3R 15075285 intron dpr9 - chr3R 15075386 intron dpr9 - chr3R_17_15075001 chr3R_15075001 RAL-849 3287 chr3R 15076634 15076661 chr3R 15076738 15076795 11 124 10.0 8.0 9.0 1.1 161 chr3R 15076634 intron dpr9 - chr3R 15076714 intron dpr9 - chr3R 15076795 intron dpr9 - chr3R_11_15075001 chr3R_15075001 RAL-849 3288 chr3R 15078288 15078374 chr3R 15078422 15078525 22 139 4.5 0.0 2.2 6.9 237 chr3R 15078288 intergenic CG6974 - chr3R 15078406 intergenic CG6974 - chr3R 15078525 intergenic CG6974 - chr3R_22_15075001 chr3R_15075001 RAL-849 3289 chr3R 15079774 15079832 chr3R 15080065 15080123 pogo 23 290 7.0 8.0 7.5 2.7 349 chr3R 15079774 3` UTR CG6966 - chr3R 15079948 3` UTR CG6966 - chr3R 15080123 3` UTR CG6966 - chr3R_23_15075001 chr3R_15075001 RAL-849 3290 chr3R 15084098 15084177 chr3R 15084280 15084359 18 182 3.0 5.5 4.2 3.5 261 chr3R 15084098 intron CG6966 - chr3R 15084228 intron CG6966 - chr3R 15084359 intron CG6966 - chr3R_18_15080001 chr3R_15080001 RAL-849 3291 chr3R 15088046 15088103 chr3R 15088194 15088245 16 147 8.0 10.5 9.2 1.6 199 chr3R 15088046 intron CG6966 - chr3R 15088146 intron CG6966 - chr3R 15088245 intron CG6966 - chr3R_16_15085001 chr3R_15085001 RAL-849 3292 chr3R 15102457 15102525 chr3R 15109762 15109830 412 32 7305 9.0 5.5 7.2 3.9 7373 chr3R 15102457 intron CG42788 - chr3R 15106144 intron CG42788 - chr3R 15109830 intron CG42788 - chr3R_32_15105001 chr3R_15105001 RAL-849 3293 chr3R 15127730 15127806 chr3R 15127861 15127936 13 130 3.5 3.5 3.5 2.9 206 chr3R 15127730 intron CG42788 - chr3R 15127833 intron CG42788 - chr3R 15127936 intron CG42788 - chr3R_13_15125001 chr3R_15125001 RAL-849 3294 chr3R 15132029 15132076 chr3R 15135139 15135186 Juan 22 3110 11.0 16.0 13.5 1.5 3157 chr3R 15132029 intergenic CG42788 - chr3R 15133608 intergenic not near genes chr3R 15135186 exon CG6912 - chr3R_22_15130001 chr3R_15130001 RAL-849 3295 chr3R 15156167 15156243 chr3R 15156364 15156440 16 197 6.5 2.5 4.5 2.9 273 chr3R 15156167 intron Gyc88E + chr3R 15156304 intron Gyc88E + chr3R 15156440 intron Gyc88E + chr3R_16_15155001 chr3R_15155001 RAL-849 3296 chr3R 15162497 15162559 chr3R 15167315 15167377 F-element 23 4815 9.5 5.5 7.5 2.7 4880 chr3R 15162497 intron Gyc88E + chr3R 15164937 intron Gyc88E + chr3R 15167377 intron Gyc88E + chr3R_23_15160001 chr3R_15160001 RAL-849 3297 chr3R 15167768 15167830 chr3R 15167975 15168037 24 207 11.0 9.0 10.0 2.2 269 chr3R 15167768 intron Gyc88E + chr3R 15167902 intron Gyc88E + chr3R 15168037 intron Gyc88E + chr3R_24_15165001 chr3R_15165001 RAL-849 3298 chr3R 15169340 15169397 chr3R 15169492 15169535 27 140 43.5 41.5 42.5 0.6 195 chr3R 15169340 intron Gyc88E + chr3R 15169438 intron Gyc88E + chr3R 15169535 intron Gyc88E + chr3R_27_15165001 chr3R_15165001 RAL-849 3299 chr3R 15190609 15190672 chr3R 15190784 15190847 48 175 10.5 17.0 13.8 3.2 238 chr3R 15190609 3` UTR Gyc88E + chr3R 15190728 3` UTR Gyc88E + chr3R 15190847 3` UTR Gyc88E + chr3R_48_15190001 chr3R_15190001 RAL-849 3300 chr3R 15189825 15189895 chr3R 15191669 15191705 8 1808 54.0 48.5 51.2 0.2 1880 chr3R 15189825 exon Gyc88E + chr3R 15190765 3` UTR Gyc88E + chr3R 15191705 exon CG6752 - chr3R_8_15190001 chr3R_15190001 RAL-849 3301 chr3R 15246874 15246945 chr3R 15247108 15247179 21 232 8.0 5.0 6.5 2.8 305 chr3R 15246874 intergenic Hsc70-4 +,CG6499 - chr3R 15247026 intergenic CG6499 -,Hsc70-4 + chr3R 15247179 3` UTR CG6499 - chr3R_21_15245001 chr3R_15245001 RAL-849 3302 chr3R 15302461 15302526 chr3R 15302589 15302654 20 127 9.0 9.5 9.2 2.0 193 chr3R 15302461 intron Tm1 + chr3R 15302558 intron Tm1 + chr3R 15302654 intron Tm1 + chr3R_20_15300001 chr3R_15300001 RAL-849 3303 chr3R 15416206 15416270 chr3R 15416336 15416400 30 130 7.5 5.0 6.2 4.2 194 chr3R 15416206 3` UTR Atx2 + chr3R 15416303 3` UTR Atx2 + chr3R 15416400 3` UTR Atx2 + chr3R_30_15415001 chr3R_15415001 RAL-849 3304 chr3R 15445861 15445905 chr3R 15445996 15446040 20 135 11.0 0.0 5.5 3.1 179 chr3R 15445861 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446040 intron AdamTS-A - chr3R_20_15445001 chr3R_15445001 RAL-849 3305 chr3R 15452235 15452302 chr3R 15452362 15452429 28 126 13.0 10.0 11.5 2.2 194 chr3R 15452235 intron AdamTS-A - chr3R 15452332 intron AdamTS-A - chr3R 15452429 intron AdamTS-A - chr3R_28_15450001 chr3R_15450001 RAL-849 3306 chr3R 15513643 15513725 chr3R 15513783 15513870 20 141 6.5 0.0 3.2 4.8 227 chr3R 15513643 intergenic not near genes chr3R 15513756 intergenic not near genes chr3R 15513870 intergenic not near genes chr3R_20_15510001 chr3R_15510001 RAL-849 3307 chr3R 15517556 15517585 chr3R 15517689 15517718 9 131 13.0 6.0 9.5 0.9 162 chr3R 15517556 intergenic not near genes chr3R 15517637 intergenic not near genes chr3R 15517718 intergenic not near genes chr3R_9_15515001 chr3R_15515001 RAL-849 3308 chr3R 15517588 15517605 chr3R 15517684 15517738 7 127 10.0 5.5 7.8 0.8 150 chr3R 15517588 intergenic not near genes chr3R 15517663 intergenic not near genes chr3R 15517738 intergenic not near genes chr3R_7_15515001 chr3R_15515001 RAL-849 3309 chr3R 15601124 15601195 chr3R 15608696 15608737 412 21 7570 6.0 14.5 10.2 1.9 7613 chr3R 15601124 intergenic not near genes chr3R 15604930 intergenic not near genes chr3R 15608737 intergenic not near genes chr3R_21_15600001 chr3R_15600001 RAL-849 3310 chr3R 15618722 15618760 chr3R 15626226 15626284 blood 14 7520 5.0 10.0 7.5 1.6 7562 chr3R 15618722 intergenic not near genes chr3R 15622503 intergenic not near genes chr3R 15626284 intergenic not near genes chr3R_14_15620001 chr3R_15620001 RAL-849 3311 chr3R 15635158 15635238 chr3R 15635309 15635389 20 151 4.5 7.0 5.8 2.9 231 chr3R 15635158 intergenic CG43335 + chr3R 15635274 intergenic CG43335 + chr3R 15635389 intergenic CG43335 + chr3R_20_15635001 chr3R_15635001 RAL-849 3312 chr3R 15644061 15644083 chr3R 15644200 15644221 11 136 16.0 5.5 10.8 0.9 160 chr3R 15644061 intergenic not near genes chr3R 15644141 intergenic not near genes chr3R 15644221 intergenic not near genes chr3R_11_15640001 chr3R_15640001 RAL-849 3313 chr3R 15644084 15644139 chr3R 15644197 15644237 12 126 6.0 5.5 5.8 1.8 153 chr3R 15644084 intergenic not near genes chr3R 15644160 intergenic not near genes chr3R 15644237 intergenic not near genes chr3R_12_15640001 chr3R_15640001 RAL-849 3314 chr3R 15691131 15691301 chr3R 15691286 15691438 21 147 0.0 0.0 0.0 21.0 307 chr3R 15691131 intergenic not near genes chr3R 15691284 intergenic not near genes chr3R 15691438 intergenic not near genes chr3R_21_15690001 chr3R_15690001 RAL-849 3315 chr3R 15702832 15702890 chr3R 15703055 15703130 15 233 0.5 5.0 2.8 3.9 298 chr3R 15702832 intergenic not near genes chr3R 15702981 intergenic not near genes chr3R 15703130 intergenic not near genes chr3R_15_15700001 chr3R_15700001 RAL-849 3316 chr3R 15735193 15735234 chr3R 15739963 15740004 F-element 18 4770 5.5 3.0 4.2 3.5 4811 chr3R 15735193 intergenic not near genes chr3R 15737598 intergenic not near genes chr3R 15740004 intergenic not near genes chr3R_18_15735001 chr3R_15735001 RAL-849 3317 chr3R 15811457 15811528 chr3R 15811748 15811817 16 290 4.0 11.0 7.5 1.9 360 chr3R 15811457 intron alpha-Man-IIb + chr3R 15811637 intron alpha-Man-IIb + chr3R 15811817 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_16_15810001 chr3R_15810001 RAL-849 3318 chr3R 15891613 15891677 chr3R 15892055 15892119 21 441 9.0 6.0 7.5 2.5 506 chr3R 15891613 intron CG14877 - chr3R 15891866 intron CG14877 - chr3R 15892119 intron CG14877 - chr3R_21_15890001 chr3R_15890001 RAL-849 3319 chr3R 15892608 15892671 chr3R 15892739 15892802 20 130 6.5 9.0 7.8 2.3 194 chr3R 15892608 intron CG14877 - chr3R 15892705 intron CG14877 - chr3R 15892802 intron CG14877 - chr3R_20_15890001 chr3R_15890001 RAL-849 3320 chr3R 15924876 15924952 chr3R 15925014 15925090 7 137 9.0 6.0 7.5 0.8 214 chr3R 15924876 intron CG4221 + chr3R 15924983 intron CG4221 + chr3R 15925090 intron CG4221 + chr3R_7_15920001 chr3R_15920001 RAL-849 3321 chr3R 16003592 16003668 chr3R 16003739 16003815 31 146 7.0 4.0 5.5 4.8 223 chr3R 16003592 3` UTR srp + chr3R 16003704 3` UTR srp + chr3R 16003815 3` UTR srp + chr3R_31_16000001 chr3R_16000001 RAL-849 3322 chr3R 16033375 16033421 chr3R 16033506 16033552 7 131 9.0 5.0 7.0 0.9 177 chr3R 16033375 intron pnr + chr3R 16033464 intron pnr + chr3R 16033552 intron pnr + chr3R_7_16030001 chr3R_16030001 RAL-849 3323 chr3R 16048812 16048880 chr3R 16048947 16049020 26 136 2.5 5.5 4.0 5.2 208 chr3R 16048812 intron ird5 - chr3R 16048916 intron ird5 - chr3R 16049020 intron ird5 - chr3R_26_16045001 chr3R_16045001 RAL-849 3324 chr3R 16246475 16246554 chr3R 16246601 16246680 11 126 8.0 9.0 8.5 1.2 205 chr3R 16246475 intron tara + chr3R 16246578 intron tara + chr3R 16246680 intron tara + chr3R_11_16245001 chr3R_16245001 RAL-849 3325 chr3R 16256543 16256615 chr3R 16256683 16256759 20 150 4.0 0.0 2.0 6.7 216 chr3R 16256543 intron tara + chr3R 16256651 intron tara + chr3R 16256759 intron tara + chr3R_20_16255001 chr3R_16255001 RAL-849 3326 chr3R 16260766 16260842 chr3R 16260897 16260968 16 130 1.0 9.5 5.2 2.6 202 chr3R 16260766 intergenic tara + chr3R 16260867 intergenic bor - chr3R 16260968 intergenic bor - chr3R_16_16260001 chr3R_16260001 RAL-849 3327 chr3R 16352597 16352669 chr3R 16354872 16354944 21 2270 7.5 2.0 4.8 3.6 2347 chr3R 16352597 intron CG10311 - chr3R 16353770 intron CG10311 - chr3R 16354944 intron CG10311 - chr3R_21_16350001 chr3R_16350001 RAL-849 3328 chr3R 16374256 16374324 chr3R 16374423 16374491 11 167 4.5 6.0 5.2 1.8 235 chr3R 16374256 intergenic ss - chr3R 16374374 intergenic ss - chr3R 16374491 3` UTR ss - chr3R_11_16370001 chr3R_16370001 RAL-849 3329 chr3R 16472556 16472588 chr3R 16472659 16472704 7 116 16.0 19.5 17.8 0.4 148 chr3R 16472556 intergenic Gyc-89Da + chr3R 16472630 5` UTR Gyc-89Da + chr3R 16472704 5` UTR Gyc-89Da + chr3R_7_16470001 chr3R_16470001 RAL-849 3330 chr3R 16582857 16582916 chr3R 16582986 16583045 13 128 16.5 12.5 14.5 0.8 188 chr3R 16582857 intron Scp2 - chr3R 16582951 intron Scp2 - chr3R 16583045 intron Scp2 - chr3R_13_16580001 chr3R_16580001 RAL-849 3331 chr3R 16621770 16621784 chr3R 16621986 16622000 7 215 17.0 15.0 16.0 0.4 230 chr3R 16621770 exon CG14893 + chr3R 16621885 exon CG14893 + chr3R 16622000 exon CG14893 + chr3R_7_16620001 chr3R_16620001 RAL-849 3332 chr3R 16621788 16621839 chr3R 16621978 16622020 16 198 6.5 13.0 9.8 1.5 232 chr3R 16621788 exon CG14893 + chr3R 16621904 exon CG14893 + chr3R 16622020 exon CG14893 + chr3R_16_16620001 chr3R_16620001 RAL-849 3333 chr3R 16671477 16671511 chr3R 16671600 16671604 12 131 12.0 11.5 11.8 0.9 127 chr3R 16671477 intron Ubx - chr3R 16671540 intron Ubx - chr3R 16671604 intron Ubx - chr3R_12_16670001 chr3R_16670001 RAL-849 3334 chr3R 16731885 16731944 chr3R 16732016 16732074 9 128 5.0 2.5 3.8 1.9 189 chr3R 16731885 intron Ubx - chr3R 16731980 intron Ubx - chr3R 16732074 intron Ubx - chr3R_9_16730001 chr3R_16730001 RAL-849 3335 chr3R 16756276 16756333 chr3R 16762517 16762558 diver 18 6238 8.5 4.5 6.5 2.4 6282 chr3R 16756276 intron bxd - chr3R 16759417 intron bxd - chr3R 16762558 intron bxd - chr3R_18_16755001 chr3R_16755001 RAL-849 3336 chr3R 16789918 16789966 chr3R 16790098 16790146 15 180 8.5 8.0 8.2 1.6 228 chr3R 16789918 3` UTR Glut3 + chr3R 16790032 intergenic Glut3 + chr3R 16790146 intergenic Glut3 + chr3R_15_16790001 chr3R_16790001 RAL-849 3337 chr3R 16836919 16836948 chr3R 16837298 16837327 9 379 7.0 7.5 7.2 1.1 408 chr3R 16836919 intron iab-8 - chr3R 16837123 intron iab-8 - chr3R 16837327 intron iab-8 - chr3R_9_16835001 chr3R_16835001 RAL-849 3338 chr3R 16836950 16836986 chr3R 16837292 16837365 8 374 4.0 7.0 5.5 1.2 415 chr3R 16836950 intron iab-8 - chr3R 16837158 intron iab-8 - chr3R 16837365 intron iab-8 - chr3R_8_16835001 chr3R_16835001 RAL-849 3339 chr3R 16846685 16846717 chr3R 16846820 16846852 11 135 5.0 6.5 5.8 1.6 167 chr3R 16846685 intron iab-8 - chr3R 16846768 intron iab-8 - chr3R 16846852 intron iab-8 - chr3R_11_16845001 chr3R_16845001 RAL-849 3340 chr3R 17101093 17101124 chr3R 17101223 17101254 19 130 8.0 0.0 4.0 3.8 161 chr3R 17101093 intron cher - chr3R 17101174 intron cher - chr3R 17101254 intron cher - chr3R_19_17100001 chr3R_17100001 RAL-849 3341 chr3R 17121490 17121554 chr3R 17121735 17121791 30 245 7.0 8.5 7.8 3.4 301 chr3R 17121490 intron cher - chr3R 17121640 intron,exon cher -,CG42779 + chr3R 17121791 intron,3` UTR cher -,CG42779 + chr3R_30_17120001 chr3R_17120001 RAL-849 3342 chr3R 17155652 17155696 chr3R 17155772 17155775 7 111 21.0 21.0 21.0 0.3 123 chr3R 17155652 exon Mur89F - chr3R 17155714 exon Mur89F - chr3R 17155775 exon Mur89F - chr3R_7_17155001 chr3R_17155001 RAL-849 3343 chr3R 17166157 17166213 chr3R 17166307 17166363 14 149 9.0 3.5 6.2 1.9 206 chr3R 17166157 intron Mur89F - chr3R 17166260 intron Mur89F - chr3R 17166363 intron Mur89F - chr3R_14_17165001 chr3R_17165001 RAL-849 3344 chr3R 17184687 17184757 chr3R 17184813 17184878 14 126 5.0 3.5 4.2 2.7 191 chr3R 17184687 intron Mur89F - chr3R 17184782 intron Mur89F - chr3R 17184878 intron Mur89F - chr3R_14_17180001 chr3R_17180001 RAL-849 3345 chr3R 17194358 17194432 chr3R 17194487 17194561 26 126 7.0 5.0 6.0 3.7 203 chr3R 17194358 intron Mur89F - chr3R 17194460 intron Mur89F - chr3R 17194561 intron Mur89F - chr3R_26_17190001 chr3R_17190001 RAL-849 3346 chr3R 17234042 17234055 chr3R 17234173 17234186 9 131 23.5 14.5 19.0 0.5 144 chr3R 17234042 intron beat-IIb - chr3R 17234114 intron beat-IIb - chr3R 17234186 intron beat-IIb - chr3R_9_17230001 chr3R_17230001 RAL-849 3347 chr3R 17234056 17234110 chr3R 17234172 17234241 16 128 10.5 14.0 12.2 1.2 185 chr3R 17234056 intron beat-IIb - chr3R 17234148 intron beat-IIb - chr3R 17234241 intron beat-IIb - chr3R_16_17230001 chr3R_17230001 RAL-849 3348 chr3R 17294632 17294685 chr3R 17295106 17295163 BS 15 475 9.5 7.5 8.5 1.6 531 chr3R 17294632 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295163 intergenic not near genes chr3R_15_17290001 chr3R_17290001 RAL-849 3349 chr3R 17321842 17321910 chr3R 17321990 17322058 17 145 6.0 5.5 5.8 2.5 216 chr3R 17321842 intron beat-IIa - chr3R 17321950 intron beat-IIa - chr3R 17322058 intron beat-IIa - chr3R_17_17320001 chr3R_17320001 RAL-849 3350 chr3R 17346669 17346713 chr3R 17348282 17348326 F-element 17 1613 5.0 7.5 6.2 2.4 1657 chr3R 17346669 intron beat-IIa - chr3R 17347498 intron beat-IIa - chr3R 17348326 intron beat-IIa - chr3R_17_17345001 chr3R_17345001 RAL-849 3351 chr3R 17348678 17348739 chr3R 17348817 17348878 24 136 10.0 7.5 8.8 2.4 200 chr3R 17348678 intron beat-IIa - chr3R 17348778 intron beat-IIa - chr3R 17348878 intron beat-IIa - chr3R_24_17345001 chr3R_17345001 RAL-849 3352 chr3R 17355451 17355519 chr3R 17355579 17355647 19 128 7.5 9.0 8.2 2.1 196 chr3R 17355451 intron beat-IIa - chr3R 17355549 intron beat-IIa - chr3R 17355647 intron beat-IIa - chr3R_19_17355001 chr3R_17355001 RAL-849 3353 chr3R 17368799 17368874 chr3R 17369100 17369181 7 304 12.5 4.5 8.5 0.7 382 chr3R 17368799 intergenic not near genes chr3R 17368990 intergenic not near genes chr3R 17369181 intergenic not near genes chr3R_7_17365001 chr3R_17365001 RAL-849 3354 chr3R 17419349 17419387 chr3R 17419487 17419521 5 135 0.0 0.0 0.0 5.0 172 chr3R 17419349 intergenic CG42834 + chr3R 17419435 intergenic CG42834 + chr3R 17419521 intergenic CG42834 + chr3R_5_17415001 chr3R_17415001 RAL-849 3355 chr3R 17461157 17461219 chr3R 17461284 17461351 15 132 6.5 5.0 5.8 2.2 194 chr3R 17461157 intergenic not near genes chr3R 17461254 intergenic not near genes chr3R 17461351 intergenic not near genes chr3R_15_17460001 chr3R_17460001 RAL-849 3356 chr3R 17497915 17497987 chr3R 17498051 17498123 32 136 5.5 6.0 5.8 4.7 208 chr3R 17497915 intron Dscam3 - chr3R 17498019 intron Dscam3 - chr3R 17498123 intron Dscam3 - chr3R_32_17495001 chr3R_17495001 RAL-849 3357 chr3R 17507401 17507477 chr3R 17507529 17507605 20 128 5.0 5.0 5.0 3.3 204 chr3R 17507401 intergenic not near genes chr3R 17507503 intergenic not near genes chr3R 17507605 intergenic not near genes chr3R_20_17505001 chr3R_17505001 RAL-849 3358 chr3R 17509210 17509241 chr3R 17516806 17516839 412 17 7594 5.5 12.0 8.8 1.7 7629 chr3R 17509210 intergenic not near genes chr3R 17513024 intergenic not near genes chr3R 17516839 intergenic not near genes chr3R_17_17510001 chr3R_17510001 RAL-849 3359 chr3R 17525245 17525276 chr3R 17525384 17525415 7 138 13.0 4.5 8.8 0.7 170 chr3R 17525245 intergenic not near genes chr3R 17525330 intergenic not near genes chr3R 17525415 intergenic not near genes chr3R_7_17525001 chr3R_17525001 RAL-849 3360 chr3R 17565559 17565597 chr3R 17565698 17565736 10 138 7.0 7.0 7.0 1.2 177 chr3R 17565559 exon Hmx + chr3R 17565648 intron Hmx + chr3R 17565736 intron Hmx + chr3R_10_17565001 chr3R_17565001 RAL-849 3361 chr3R 17565598 17565632 chr3R 17565696 17565766 23 134 2.0 6.5 4.2 4.4 168 chr3R 17565598 intron Hmx + chr3R 17565682 intron Hmx + chr3R 17565766 intron Hmx + chr3R_23_17565001 chr3R_17565001 RAL-849 3362 chr3R 17569917 17569948 chr3R 17570046 17570072 13 126 12.0 7.0 9.5 1.2 155 chr3R 17569917 intergenic not near genes chr3R 17569994 intergenic not near genes chr3R 17570072 intergenic not near genes chr3R_13_17565001 chr3R_17565001 RAL-849 3363 chr3R 17569949 17569986 chr3R 17570038 17570094 19 118 7.0 7.5 7.2 2.3 145 chr3R 17569949 intergenic not near genes chr3R 17570022 intergenic not near genes chr3R 17570094 intergenic not near genes chr3R_19_17570001 chr3R_17570001 RAL-849 3364 chr3R 17591248 17591258 chr3R 17591734 17591744 F-element 4 486 15.5 9.0 12.2 0.3 496 chr3R 17591248 intergenic not near genes chr3R 17591496 intergenic not near genes chr3R 17591744 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-849 3365 chr3R 17591263 17591302 chr3R 17591727 17591788 F-element 15 482 9.5 7.5 8.5 1.6 525 chr3R 17591263 intergenic not near genes chr3R 17591526 intergenic not near genes chr3R 17591788 intergenic not near genes chr3R_15_17590001 chr3R_17590001 RAL-849 3366 chr3R 17638274 17638347 chr3R 17638810 17638883 roo 17 536 8.5 3.0 5.8 2.5 609 chr3R 17638274 intron CG43175 + chr3R 17638578 intron CG43175 + chr3R 17638883 intron,intron CG43175 +,CR45222 + chr3R_17_17635001 chr3R_17635001 RAL-849 3367 chr3R 17647197 17647271 chr3R 17647344 17647418 20 147 5.0 5.0 5.0 3.3 221 chr3R 17647197 intergenic CG14322 + chr3R 17647308 intergenic CG14322 + chr3R 17647418 intergenic CG14322 + chr3R_20_17645001 chr3R_17645001 RAL-849 3368 chr3R 17655405 17655481 chr3R 17655550 17655626 19 145 4.0 3.5 3.8 4.0 221 chr3R 17655405 intron CG14322 + chr3R 17655516 intron CG14322 + chr3R 17655626 intron CG14322 + chr3R_19_17655001 chr3R_17655001 RAL-849 3369 chr3R 17734797 17734860 chr3R 17734961 17735024 22 164 4.0 0.0 2.0 7.3 227 chr3R 17734797 intergenic CG14321 + chr3R 17734910 intergenic not near genes chr3R 17735024 intergenic not near genes chr3R_22_17730001 chr3R_17730001 RAL-849 3370 chr3R 17748332 17748347 chr3R 17748515 17748550 5 199 15.0 4.5 9.8 0.5 218 chr3R 17748332 intergenic not near genes chr3R 17748441 intergenic not near genes chr3R 17748550 intergenic not near genes chr3R_5_17745001 chr3R_17745001 RAL-849 3371 chr3R 17748354 17748386 chr3R 17748510 17748589 15 187 8.0 3.5 5.8 2.2 235 chr3R 17748354 intergenic not near genes chr3R 17748472 intergenic not near genes chr3R 17748589 intergenic not near genes chr3R_15_17745001 chr3R_17745001 RAL-849 3372 chr3R 17773345 17773393 chr3R 17773475 17773523 16 130 7.5 12.0 9.8 1.5 178 chr3R 17773345 exon CG43102 - chr3R 17773434 intron CG43102 - chr3R 17773523 exon CG43102 - chr3R_16_17770001 chr3R_17770001 RAL-849 3373 chr3R 17811145 17811172 chr3R 17811275 17811302 6 130 18.0 0.0 9.0 0.6 157 chr3R 17811145 intergenic CG18012 -,tinc + chr3R 17811224 intergenic CG18012 -,tinc + chr3R 17811302 intergenic CG18012 -,tinc + chr3R_6_17810001 chr3R_17810001 RAL-849 3374 chr3R 17823158 17823231 chr3R 17823293 17823366 29 134 5.0 2.5 3.8 6.0 208 chr3R 17823158 intron tinc + chr3R 17823262 intron tinc + chr3R 17823366 intron tinc + chr3R_29_17820001 chr3R_17820001 RAL-849 3375 chr3R 17845208 17845210 chr3R 17845303 17845336 4 119 7.5 8.5 8.0 0.4 128 chr3R 17845208 intron tinc + chr3R 17845272 intron tinc + chr3R 17845336 intron tinc + chr3R_4_17845001 chr3R_17845001 RAL-849 3376 chr3R 17851694 17851784 chr3R 17851901 17851987 12 204 0.0 5.0 2.5 3.4 293 chr3R 17851694 intron tinc + chr3R 17851840 intron tinc + chr3R 17851987 5` UTR tinc + chr3R_12_17850001 chr3R_17850001 RAL-849 3377 chr3R 17855999 17856047 chr3R 17856144 17856197 18 145 11.0 6.5 8.8 1.8 198 chr3R 17855999 intron tinc + chr3R 17856098 intron tinc + chr3R 17856197 intron tinc + chr3R_18_17855001 chr3R_17855001 RAL-849 3378 chr3R 17895327 17895375 chr3R 17895468 17895516 19 141 6.5 12.0 9.2 1.9 189 chr3R 17895327 intron Rim - chr3R 17895422 intron Rim - chr3R 17895516 intron Rim - chr3R_19_17895001 chr3R_17895001 RAL-849 3379 chr3R 17898322 17898350 chr3R 17898454 17898472 10 131 5.5 15.0 10.2 0.9 150 chr3R 17898322 intron Rim - chr3R 17898397 intron Rim - chr3R 17898472 intron Rim - chr3R_10_17895001 chr3R_17895001 RAL-849 3380 chr3R 17899044 17899059 chr3R 17899172 17899187 6 128 7.5 8.0 7.8 0.7 143 chr3R 17899044 intron Rim - chr3R 17899116 intron Rim - chr3R 17899187 intron Rim - chr3R_6_17895001 chr3R_17895001 RAL-849 3381 chr3R 17913072 17913148 chr3R 17913217 17913293 18 145 0.0 6.0 3.0 4.5 221 chr3R 17913072 intron Rim - chr3R 17913182 intron Rim - chr3R 17913293 intron Rim - chr3R_18_17910001 chr3R_17910001 RAL-849 3382 chr3R 17925824 17925865 chr3R 17927333 17927358 hobo 12 1514 10.0 13.0 11.5 1.0 1534 chr3R 17925824 intron cpo + chr3R 17926591 intron cpo + chr3R 17927358 intron cpo + chr3R_12_17925001 chr3R_17925001 RAL-849 3383 chr3R 17964181 17964247 chr3R 17964336 17964373 16 152 5.0 6.0 5.5 2.5 192 chr3R 17964181 intron cpo + chr3R 17964277 intron cpo + chr3R 17964373 intron cpo + chr3R_16_17960001 chr3R_17960001 RAL-849 3384 chr3R 18032739 18032809 chr3R 18040457 18040527 opus 12 7718 3.0 2.5 2.8 3.2 7788 chr3R 18032739 intergenic not near genes chr3R 18036633 intergenic not near genes chr3R 18040527 intergenic not near genes chr3R_12_18035001 chr3R_18035001 RAL-849 3385 chr3R 18041703 18041712 chr3R 18041830 18041839 5 127 2.0 0.5 1.2 2.3 136 chr3R 18041703 intergenic not near genes chr3R 18041771 intergenic not near genes chr3R 18041839 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-849 3386 chr3R 18061396 18061446 chr3R 18061538 18061588 16 142 11.0 0.5 5.8 2.4 192 chr3R 18061396 intergenic not near genes chr3R 18061492 intergenic not near genes chr3R 18061588 intergenic not near genes chr3R_16_18060001 chr3R_18060001 RAL-849 3387 chr3R 18061572 18061575 chr3R 18063195 18063199 F-element 5 1624 0.5 4.0 2.2 1.6 1627 chr3R 18061572 intergenic not near genes chr3R 18062386 intergenic not near genes chr3R 18063199 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-849 3388 chr3R 18065628 18065663 chr3R 18065789 18065824 5 161 1.0 7.0 4.0 1.0 196 chr3R 18065628 intergenic not near genes chr3R 18065726 intergenic not near genes chr3R 18065824 intergenic not near genes chr3R_5_18065001 chr3R_18065001 RAL-849 3389 chr3R 18067934 18068022 chr3R 18068080 18068154 14 142 0.0 2.0 1.0 7.0 220 chr3R 18067934 intergenic not near genes chr3R 18068044 intergenic not near genes chr3R 18068154 intergenic not near genes chr3R_14_18065001 chr3R_18065001 RAL-849 3390 chr3R 18107119 18107135 chr3R 18107252 18107268 9 133 0.0 12.5 6.2 1.2 149 chr3R 18107119 intron sr + chr3R 18107194 intron sr + chr3R 18107268 intron sr + chr3R_9_18105001 chr3R_18105001 RAL-849 3391 chr3R 18117369 18117438 chr3R 18117495 18117564 11 126 7.0 7.5 7.2 1.3 195 chr3R 18117369 intron sr + chr3R 18117466 intron sr + chr3R 18117564 intron sr + chr3R_11_18115001 chr3R_18115001 RAL-849 3392 chr3R 18119701 18119754 chr3R 18119828 18119881 13 127 3.0 3.0 3.0 3.2 180 chr3R 18119701 intron sr + chr3R 18119791 intron sr + chr3R 18119881 intron sr + chr3R_13_18115001 chr3R_18115001 RAL-849 3393 chr3R 18136185 18136220 chr3R 18136349 18136384 10 164 17.0 4.0 10.5 0.9 199 chr3R 18136185 intergenic not near genes chr3R 18136284 intergenic not near genes chr3R 18136384 intergenic not near genes chr3R_10_18135001 chr3R_18135001 RAL-849 3394 chr3R 18215439 18215455 chr3R 18377697 18377707 9 162257 6.5 24.5 15.5 0.5 162268 chr3R 18215439 intergenic CG7985 + chr3R 18296573 intron l(3)05822 - chr3R 18377707 intergenic CG7675 - chr3R_9_18295001 chr3R_18295001 RAL-849 3395 chr3R 18473173 18473253 chr3R 18473322 18473389 11 139 0.0 4.0 2.0 3.7 216 chr3R 18473173 intron fru - chr3R 18473281 intron fru - chr3R 18473389 intron fru - chr3R_11_18470001 chr3R_18470001 RAL-849 3396 chr3R 18481146 18481210 chr3R 18481285 18481344 25 137 0.0 8.0 4.0 5.0 198 chr3R 18481146 intron fru - chr3R 18481245 intron fru - chr3R 18481344 intron fru - chr3R_25_18480001 chr3R_18480001 RAL-849 3397 chr3R 18501549 18501616 chr3R 18501680 18501747 24 131 11.0 8.0 9.5 2.3 198 chr3R 18501549 intron fru - chr3R 18501648 intron fru - chr3R 18501747 intron fru - chr3R_24_18500001 chr3R_18500001 RAL-849 3398 chr3R 18559385 18559514 chr3R 18559512 18559660 9 131 0.0 0.0 0.0 9.0 275 chr3R 18559385 intergenic CG7691 + chr3R 18559522 intergenic CG7691 + chr3R 18559660 intergenic CG7691 + chr3R_9_18555001 chr3R_18555001 RAL-849 3399 chr3R 18562522 18562588 chr3R 18562691 18562758 18 168 3.0 5.5 4.2 3.5 236 chr3R 18562522 intergenic not near genes chr3R 18562640 intergenic not near genes chr3R 18562758 intergenic not near genes chr3R_18_18560001 chr3R_18560001 RAL-849 3400 chr3R 18606461 18606509 chr3R 18610743 18610791 F-element 23 4281 10.5 7.0 8.8 2.3 4330 chr3R 18606461 intron,intron qin +,CG14304 - chr3R 18608626 intron,intron qin +,CG14304 - chr3R 18610791 intron,intron qin +,CG14304 - chr3R_23_18605001 chr3R_18605001 RAL-849 3401 chr3R 18617688 18617734 chr3R 18617818 18617864 15 130 5.0 6.0 5.5 2.3 176 chr3R 18617688 intron,intron qin +,CG14304 - chr3R 18617776 intron,intron qin +,CG14304 - chr3R 18617864 intron,intron qin +,CG14304 - chr3R_15_18615001 chr3R_18615001 RAL-849 3402 chr3R 18695929 18695962 chr3R 18696147 18696164 9 216 4.5 19.5 12.0 0.7 235 chr3R 18695929 intergenic CG34282 + chr3R 18696046 intergenic CG34282 + chr3R 18696164 intergenic CG34282 + chr3R_9_18695001 chr3R_18695001 RAL-849 3403 chr3R 18729974 18730036 chr3R 18730100 18730151 24 125 6.5 6.0 6.2 3.3 177 chr3R 18729974 exon Cha + chr3R 18730062 intron Cha + chr3R 18730151 exon Cha + chr3R_24_18730001 chr3R_18730001 RAL-849 3404 chr3R 18781648 18781721 chr3R 18781774 18781847 24 124 7.0 9.5 8.2 2.6 199 chr3R 18781648 intron CG7720 - chr3R 18781748 intron CG7720 - chr3R 18781847 intron CG7720 - chr3R_24_18780001 chr3R_18780001 RAL-849 3405 chr3R 18782712 18782747 chr3R 18782856 18782891 7 144 10.0 8.5 9.2 0.7 179 chr3R 18782712 intron CG7720 - chr3R 18782802 intron CG7720 - chr3R 18782891 intron CG7720 - chr3R_7_18780001 chr3R_18780001 RAL-849 3406 chr3R 18785826 18785896 chr3R 18785953 18786023 19 126 6.0 1.0 3.5 4.2 197 chr3R 18785826 intron CG7720 - chr3R 18785924 intron CG7720 - chr3R 18786023 intron CG7720 - chr3R_19_18785001 chr3R_18785001 RAL-849 3407 chr3R 18791452 18791515 chr3R 18791575 18791602 16 113 10.0 5.0 7.5 1.9 150 chr3R 18791452 intron CG7720 - chr3R 18791527 intron CG7720 - chr3R 18791602 intron CG7720 - chr3R_16_18790001 chr3R_18790001 RAL-849 3408 chr3R 18792796 18792827 chr3R 18792929 18792960 7 133 3.0 0.0 1.5 2.8 164 chr3R 18792796 intron CG7720 - chr3R 18792878 intron CG7720 - chr3R 18792960 intron CG7720 - chr3R_7_18790001 chr3R_18790001 RAL-849 3409 chr3R 18807278 18807307 chr3R 18807405 18807434 15 127 12.5 0.0 6.2 2.1 156 chr3R 18807278 exon CG18208 - chr3R 18807356 intron CG18208 - chr3R 18807434 intron CG18208 - chr3R_15_18805001 chr3R_18805001 RAL-849 3410 chr3R 18812026 18812038 chr3R 18812153 18812166 9 128 21.5 8.0 14.8 0.6 140 chr3R 18812026 intron CG18208 - chr3R 18812096 intron CG18208 - chr3R 18812166 intron CG18208 - chr3R_9_18810001 chr3R_18810001 RAL-849 3411 chr3R 18812066 18812092 chr3R 18812194 18812220 10 128 12.0 16.0 14.0 0.7 154 chr3R 18812066 intron CG18208 - chr3R 18812143 intron CG18208 - chr3R 18812220 intron CG18208 - chr3R_10_18810001 chr3R_18810001 RAL-849 3412 chr3R 18827832 18827892 chr3R 18827964 18828024 18 128 5.0 4.0 4.5 3.3 192 chr3R 18827832 intron CG18208 - chr3R 18827928 intron CG18208 - chr3R 18828024 intron CG18208 - chr3R_18_18825001 chr3R_18825001 RAL-849 3413 chr3R 18999469 18999535 chr3R 18999595 18999661 23 122 7.0 7.5 7.2 2.8 192 chr3R 18999469 intron gukh + chr3R 18999565 intron gukh + chr3R 18999661 intron gukh + chr3R_23_18995001 chr3R_18995001 RAL-849 3414 chr3R 19012998 19013051 chr3R 19013132 19013180 22 133 3.0 12.5 7.8 2.5 182 chr3R 19012998 intron gukh + chr3R 19013089 intron gukh + chr3R 19013180 exon gukh + chr3R_22_19010001 chr3R_19010001 RAL-849 3415 chr3R 19058002 19058020 chr3R 19064381 19064398 9 6401 33.0 14.0 23.5 0.4 6396 chr3R 19058002 intron cdi - chr3R 19061200 intron cdi - chr3R 19064398 intron cdi - chr3R_9_19060001 chr3R_19060001 RAL-849 3416 chr3R 19058000 19058017 chr3R 19064246 19064319 9 6259 33.5 28.5 31.0 0.3 6319 chr3R 19058000 intron cdi - chr3R 19061160 intron cdi - chr3R 19064319 intron cdi - chr3R_9_19060001 chr3R_19060001 RAL-849 3417 chr3R 19077625 19077703 chr3R 19077792 19077844 27 165 8.5 5.0 6.8 3.5 219 chr3R 19077625 intron cdi - chr3R 19077734 intron cdi - chr3R 19077844 intron cdi - chr3R_27_19075001 chr3R_19075001 RAL-849 3418 chr3R 19116883 19116890 chr3R 19117046 19117058 5 167 4.5 1.0 2.8 1.3 175 chr3R 19116883 intron CG6040 + chr3R 19116970 intron CG6040 + chr3R 19117058 intron CG6040 + chr3R_5_19115001 chr3R_19115001 RAL-849 3419 chr3R 19136409 19136436 chr3R 19139745 19139772 Bari1 11 3339 94.5 48.5 71.5 0.2 3363 chr3R 19136409 exon Cyp12a4 + chr3R 19138090 intergenic not near genes chr3R 19139772 3` UTR Ppcs - chr3R_11_19135001 chr3R_19135001 RAL-849 3420 chr3R 19136408 19136422 chr3R 19139773 19139871 Bari1 20 3349 99.0 47.5 73.2 0.3 3463 chr3R 19136408 exon Cyp12a4 + chr3R 19138140 intergenic not near genes chr3R 19139871 3` UTR Ppcs - chr3R_20_19135001 chr3R_19135001 RAL-849 3421 chr3R 19140227 19140289 chr3R 19140724 19140787 22 494 6.0 10.5 8.2 2.4 560 chr3R 19140227 3` UTR Ppcs - chr3R 19140507 3` UTR Ppcs - chr3R 19140787 3` UTR Ppcs - chr3R_22_19140001 chr3R_19140001 RAL-849 3422 chr3R 19151329 19151333 chr3R 19151452 19151460 4 125 10.5 16.5 13.5 0.3 131 chr3R 19151329 intron CG5835 - chr3R 19151394 intron CG5835 - chr3R 19151460 intron CG5835 - chr3R_4_19150001 chr3R_19150001 RAL-849 3423 chr3R 19193003 19193005 chr3R 19197284 19197359 F-element 9 4323 1.0 8.0 4.5 1.6 4356 chr3R 19193003 intron CG31475 + chr3R 19195181 intron CG31475 + chr3R 19197359 intron CG31475 + chr3R_9_19195001 chr3R_19195001 RAL-849 3424 chr3R 19208649 19208660 chr3R 19208786 19208797 6 137 12.0 0.0 6.0 0.9 148 chr3R 19208649 intergenic not near genes chr3R 19208723 intergenic not near genes chr3R 19208797 intergenic not near genes chr3R_6_19205001 chr3R_19205001 RAL-849 3425 chr3R 19223903 19223906 chr3R 19224033 19224036 5 130 0.0 13.0 6.5 0.7 133 chr3R 19223903 intron vib - chr3R 19223970 intron vib - chr3R 19224036 intron vib - chr3R_5_19220001 chr3R_19220001 RAL-849 3426 chr3R 19248834 19248905 chr3R 19248964 19249045 17 132 3.5 0.0 1.8 6.1 211 chr3R 19248834 intergenic not near genes chr3R 19248940 intergenic not near genes chr3R 19249045 intergenic not near genes chr3R_17_19245001 chr3R_19245001 RAL-849 3427 chr3R 19290874 19290909 chr3R 19291007 19291042 6 133 2.0 6.5 4.2 1.2 168 chr3R 19290874 intergenic not near genes chr3R 19290958 intergenic not near genes chr3R 19291042 intergenic not near genes chr3R_6_19290001 chr3R_19290001 RAL-849 3428 chr3R 19337165 19337200 chr3R 19337303 19337338 11 135 13.5 19.5 16.5 0.6 173 chr3R 19337165 intergenic not near genes chr3R 19337252 intergenic not near genes chr3R 19337338 intergenic not near genes chr3R_11_19335001 chr3R_19335001 RAL-849 3429 chr3R 19344620 19344691 chr3R 19344805 19344876 23 185 4.5 4.5 4.5 4.2 256 chr3R 19344620 intergenic not near genes chr3R 19344748 intergenic not near genes chr3R 19344876 intergenic not near genes chr3R_23_19340001 chr3R_19340001 RAL-849 3430 chr3R 19417500 19417556 chr3R 19417636 19417704 9 138 0.5 7.0 3.8 1.9 204 chr3R 19417500 intron CG31221 + chr3R 19417602 intron CG31221 + chr3R 19417704 intron CG31221 + chr3R_9_19415001 chr3R_19415001 RAL-849 3431 chr3R 19427420 19427433 chr3R 19427547 19427560 4 127 6.5 0.0 3.2 1.0 140 chr3R 19427420 intron CG31221 + chr3R 19427490 intron CG31221 + chr3R 19427560 intron CG31221 + chr3R_4_19425001 chr3R_19425001 RAL-849 3432 chr3R 19431070 19431123 chr3R 19431355 19431408 26 285 3.0 6.5 4.8 4.5 338 chr3R 19431070 intron CG31221 + chr3R 19431239 intron CG31221 + chr3R 19431408 intron CG31221 + chr3R_26_19430001 chr3R_19430001 RAL-849 3433 chr3R 19431454 19431498 chr3R 19431590 19431632 12 135 6.5 5.5 6.0 1.7 178 chr3R 19431454 intron CG31221 + chr3R 19431543 intron CG31221 + chr3R 19431632 intron CG31221 + chr3R_12_19430001 chr3R_19430001 RAL-849 3434 chr3R 19475379 19475439 chr3R 19475908 19475968 20 527 8.0 2.0 5.0 3.3 589 chr3R 19475379 intron Dys + chr3R 19475674 intron Dys + chr3R 19475968 intron Dys + chr3R_20_19475001 chr3R_19475001 RAL-849 3435 chr3R 19494365 19494412 chr3R 19494495 19494542 7 130 11.5 6.0 8.8 0.7 177 chr3R 19494365 intron Dys + chr3R 19494454 intron Dys + chr3R 19494542 intron Dys + chr3R_7_19490001 chr3R_19490001 RAL-849 3436 chr3R 19502940 19502968 chr3R 19503072 19503100 10 131 6.0 0.5 3.2 2.4 160 chr3R 19502940 intron Dys + chr3R 19503020 intron Dys + chr3R 19503100 intron Dys + chr3R_10_19500001 chr3R_19500001 RAL-849 3437 chr3R 19561778 19561809 chr3R 19561905 19561915 13 123 15.5 4.0 9.8 1.2 137 chr3R 19561778 intron Dys + chr3R 19561846 intron Dys + chr3R 19561915 intron Dys + chr3R_13_19560001 chr3R_19560001 RAL-849 3438 chr3R 19575849 19575888 chr3R 19576005 19576044 9 156 1.0 10.0 5.5 1.4 195 chr3R 19575849 intron Dys + chr3R 19575946 intron Dys + chr3R 19576044 intron Dys + chr3R_9_19575001 chr3R_19575001 RAL-849 3439 chr3R 19581524 19581587 chr3R 19581655 19581718 22 131 9.0 9.0 9.0 2.2 194 chr3R 19581524 intron Dys + chr3R 19581621 intron Dys + chr3R 19581718 intron Dys + chr3R_22_19580001 chr3R_19580001 RAL-849 3440 chr3R 19633265 19633318 chr3R 19633397 19633450 20 131 2.5 11.0 6.8 2.6 185 chr3R 19633265 intergenic subdued - chr3R 19633358 intergenic subdued - chr3R 19633450 3` UTR subdued - chr3R_20_19630001 chr3R_19630001 RAL-849 3441 chr3R 19651678 19651757 chr3R 19651804 19651883 37 126 9.5 8.0 8.8 3.8 205 chr3R 19651678 exon CG31219 + chr3R 19651780 exon CG31219 + chr3R 19651883 intron CG31219 + chr3R_37_19650001 chr3R_19650001 RAL-849 3442 chr3R 19714181 19714232 chr3R 19714593 19714663 17 413 6.5 7.0 6.8 2.2 482 chr3R 19714181 intergenic not near genes chr3R 19714422 intergenic not near genes chr3R 19714663 intergenic not near genes chr3R_17_19710001 chr3R_19710001 RAL-849 3443 chr3R 19733978 19734011 chr3R 19734106 19734139 12 128 5.0 7.0 6.0 1.7 161 chr3R 19733978 intron GluClalpha + chr3R 19734058 intron GluClalpha + chr3R 19734139 intron GluClalpha + chr3R_12_19730001 chr3R_19730001 RAL-849 3444 chr3R 19744198 19744207 chr3R 19749494 19749505 Rt1a 4 5296 22.0 8.5 15.2 0.2 5307 chr3R 19744198 intron,intron GluClalpha +,CR43488 - chr3R 19746852 intron GluClalpha + chr3R 19749505 intron GluClalpha + chr3R_4_19745001 chr3R_19745001 RAL-849 3445 chr3R 19827483 19827555 chr3R 19827612 19827691 18 136 9.0 7.5 8.2 2.0 208 chr3R 19827483 intron bnl - chr3R 19827587 intron bnl - chr3R 19827691 exon bnl - chr3R_18_19825001 chr3R_19825001 RAL-849 3446 chr3R 19834235 19834297 chr3R 19834593 19834655 21 358 11.0 15.0 13.0 1.5 420 chr3R 19834235 intron bnl - chr3R 19834445 intron bnl - chr3R 19834655 intron bnl - chr3R_21_19830001 chr3R_19830001 RAL-849 3447 chr3R 20008783 20008842 chr3R 20008914 20008967 23 129 8.5 10.5 9.5 2.2 184 chr3R 20008783 intergenic MED25 +,Hs6st - chr3R 20008875 intergenic MED25 +,Hs6st - chr3R 20008967 5` UTR MED25 + chr3R_23_20005001 chr3R_20005001 RAL-849 3448 chr3R 20020116 20020174 chr3R 20020308 20020366 21 192 7.5 9.5 8.5 2.2 250 chr3R 20020116 intron CG4433 - chr3R 20020241 intron CG4433 - chr3R 20020366 exon CG4433 - chr3R_21_20020001 chr3R_20020001 RAL-849 3449 chr3R 20087105 20087145 chr3R 20087249 20087289 5 144 5.0 0.0 2.5 1.4 184 chr3R 20087105 intergenic not near genes chr3R 20087197 intergenic not near genes chr3R 20087289 intergenic not near genes chr3R_5_20085001 chr3R_20085001 RAL-849 3450 chr3R 20109505 20109559 chr3R 20114761 20114815 copia 22 5256 7.5 7.5 7.5 2.6 5310 chr3R 20109505 intergenic not near genes chr3R 20112160 intergenic not near genes chr3R 20114815 intergenic CG10887 + chr3R_22_20110001 chr3R_20110001 RAL-849 3451 chr3R 20156653 20156713 chr3R 20165873 20165933 roo 34 9219 5.5 11.0 8.2 3.7 9280 chr3R 20156653 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165933 intergenic not near genes chr3R_34_20160001 chr3R_20160001 RAL-849 3452 chr3R 20222205 20222274 chr3R 20222338 20222407 7 133 6.0 3.5 4.8 1.2 202 chr3R 20222205 intron Nlg4 + chr3R 20222306 intron Nlg4 + chr3R 20222407 intron Nlg4 + chr3R_7_20220001 chr3R_20220001 RAL-849 3453 chr3R 20230303 20230352 chr3R 20230435 20230485 5 133 1.5 1.5 1.5 2.0 182 chr3R 20230303 intron Nlg4 + chr3R 20230394 intron Nlg4 + chr3R 20230485 intron Nlg4 + chr3R_5_20230001 chr3R_20230001 RAL-849 3454 chr3R 20238756 20238768 chr3R 20238886 20238898 7 130 12.5 11.5 12.0 0.5 142 chr3R 20238756 intron Nlg4 + chr3R 20238827 intron Nlg4 + chr3R 20238898 intron Nlg4 + chr3R_7_20235001 chr3R_20235001 RAL-849 3455 chr3R 20242533 20242601 chr3R 20242683 20242754 21 153 13.0 2.5 7.8 2.4 221 chr3R 20242533 intron Nlg4 + chr3R 20242644 intron Nlg4 + chr3R 20242754 intron Nlg4 + chr3R_21_20240001 chr3R_20240001 RAL-849 3456 chr3R 20245267 20245295 chr3R 20248927 20248955 F-element 9 3660 0.0 0.0 0.0 9.0 3688 chr3R 20245267 3` UTR Nlg4 + chr3R 20247111 intergenic not near genes chr3R 20248955 intergenic not near genes chr3R_9_20245001 chr3R_20245001 RAL-849 3457 chr3R 20252172 20252252 chr3R 20252300 20252380 25 126 6.0 8.0 7.0 3.1 208 chr3R 20252172 intergenic not near genes chr3R 20252276 intergenic cic + chr3R 20252380 intergenic cic + chr3R_25_20250001 chr3R_20250001 RAL-849 3458 chr3R 20256790 20256860 chr3R 20256916 20256988 17 127 1.0 8.0 4.5 3.1 198 chr3R 20256790 intron cic + chr3R 20256889 intron cic + chr3R 20256988 intron cic + chr3R_17_20255001 chr3R_20255001 RAL-849 3459 chr3R 20266505 20266531 chr3R 20273026 20273052 Burdock 10 6521 1.0 13.5 7.2 1.2 6547 chr3R 20266505 intron cic + chr3R 20269778 intron cic + chr3R 20273052 intron cic + chr3R_10_20265001 chr3R_20265001 RAL-849 3460 chr3R 20282230 20282298 chr3R 20282356 20282424 15 126 4.5 5.0 4.8 2.6 194 chr3R 20282230 intron cic + chr3R 20282327 intron cic + chr3R 20282424 intron cic + chr3R_15_20280001 chr3R_20280001 RAL-849 3461 chr3R 20311850 20311905 chr3R 20314151 20314201 19 2300 27.5 24.5 26.0 0.7 2351 chr3R 20311850 intron CG42668 + chr3R 20313026 intron CG42668 + chr3R 20314201 intron CG42668 + chr3R_19_20310001 chr3R_20310001 RAL-849 3462 chr3R 20311905 20311957 chr3R 20314316 20314377 28 2407 25.0 47.0 36.0 0.8 2472 chr3R 20311905 intron CG42668 + chr3R 20313141 intron CG42668 + chr3R 20314377 intron CG42668 + chr3R_28_20310001 chr3R_20310001 RAL-849 3463 chr3R 20330956 20331021 chr3R 20331492 20331557 roo 20 536 7.5 4.5 6.0 2.9 601 chr3R 20330956 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331557 intergenic not near genes chr3R_20_20330001 chr3R_20330001 RAL-849 3464 chr3R 20365721 20365780 chr3R 20365850 20365910 17 130 5.5 6.0 5.8 2.5 189 chr3R 20365721 intergenic not near genes chr3R 20365816 intergenic not near genes chr3R 20365910 intergenic not near genes chr3R_17_20365001 chr3R_20365001 RAL-849 3465 chr3R 20389653 20389720 chr3R 20389785 20389852 7 132 7.5 10.5 9.0 0.7 199 chr3R 20389653 intron Gfrl - chr3R 20389752 intron Gfrl - chr3R 20389852 intron Gfrl - chr3R_7_20385001 chr3R_20385001 RAL-849 3466 chr3R 20411356 20411420 chr3R 20411670 20411734 15 314 6.0 5.0 5.5 2.3 378 chr3R 20411356 intron Gfrl - chr3R 20411545 intron Gfrl - chr3R 20411734 intron Gfrl - chr3R_15_20410001 chr3R_20410001 RAL-849 3467 chr3R 20433060 20433121 chr3R 20433200 20433261 16 140 5.0 7.0 6.0 2.3 201 chr3R 20433060 intron Gfrl - chr3R 20433160 intron Gfrl - chr3R 20433261 intron Gfrl - chr3R_16_20430001 chr3R_20430001 RAL-849 3468 chr3R 20443104 20443184 chr3R 20443276 20443356 29 170 6.5 7.0 6.8 3.7 252 chr3R 20443104 intron Gfrl - chr3R 20443230 intron Gfrl - chr3R 20443356 intron Gfrl - chr3R_29_20440001 chr3R_20440001 RAL-849 3469 chr3R 20450067 20450144 chr3R 20450197 20450279 10 133 3.5 0.0 1.8 3.6 212 chr3R 20450067 intron Gfrl - chr3R 20450173 intron Gfrl - chr3R 20450279 intron Gfrl - chr3R_10_20450001 chr3R_20450001 RAL-849 3470 chr3R 20456060 20456131 chr3R 20456214 20456250 31 150 8.0 9.0 8.5 3.3 190 chr3R 20456060 intron Gfrl - chr3R 20456155 intron Gfrl - chr3R 20456250 intron Gfrl - chr3R_31_20455001 chr3R_20455001 RAL-849 3471 chr3R 20457980 20458043 chr3R 20458119 20458189 23 145 4.0 5.0 4.5 4.2 209 chr3R 20457980 intron Gfrl - chr3R 20458084 intron Gfrl - chr3R 20458189 intron Gfrl - chr3R_23_20455001 chr3R_20455001 RAL-849 3472 chr3R 20469239 20469466 chr3R 20469382 20469599 24 138 0.0 0.0 0.0 24.0 360 chr3R 20469239 intron Gfrl - chr3R 20469419 intron Gfrl - chr3R 20469599 intron Gfrl - chr3R_24_20465001 chr3R_20465001 RAL-849 3473 chr3R 20483278 20483290 chr3R 20483413 20483425 8 135 6.5 7.0 6.8 1.0 147 chr3R 20483278 intron Gfrl - chr3R 20483352 intron Gfrl - chr3R 20483425 intron Gfrl - chr3R_8_20480001 chr3R_20480001 RAL-849 3474 chr3R 20512295 20512357 chr3R 20512428 20512489 28 129 8.0 5.5 6.8 3.6 194 chr3R 20512295 intron CG4288 - chr3R 20512392 5` UTR CG4288 - chr3R 20512489 intergenic CG4288 - chr3R_28_20510001 chr3R_20510001 RAL-849 3475 chr3R 20512960 20513029 chr3R 20515713 20515782 opus 15 2753 7.5 4.5 6.0 2.1 2822 chr3R 20512960 intergenic CG4288 - chr3R 20514371 intergenic not near genes chr3R 20515782 intergenic not near genes chr3R_15_20510001 chr3R_20510001 RAL-849 3476 chr3R 20717047 20717112 chr3R 20717180 20717245 15 129 4.5 7.0 5.8 2.2 198 chr3R 20717047 intergenic not near genes chr3R 20717146 intergenic not near genes chr3R 20717245 intergenic not near genes chr3R_15_20715001 chr3R_20715001 RAL-849 3477 chr3R 20730895 20730957 chr3R 20731036 20731115 11 145 3.5 0.0 1.8 3.9 220 chr3R 20730895 intergenic not near genes chr3R 20731005 intergenic not near genes chr3R 20731115 intergenic not near genes chr3R_11_20730001 chr3R_20730001 RAL-849 3478 chr3R 20767481 20767523 chr3R 20767605 20767662 22 141 11.5 11.0 11.2 1.8 181 chr3R 20767481 intron Syp + chr3R 20767572 intron Syp + chr3R 20767662 intron Syp + chr3R_22_20765001 chr3R_20765001 RAL-849 3479 chr3R 20769532 20769606 chr3R 20769708 20769730 15 171 5.5 0.0 2.8 3.9 198 chr3R 20769532 intron Syp + chr3R 20769631 intron Syp + chr3R 20769730 intron Syp + chr3R_15_20765001 chr3R_20765001 RAL-849 3480 chr3R 20787389 20787458 chr3R 20787530 20787599 26 141 7.0 7.5 7.2 3.2 210 chr3R 20787389 intron Syp + chr3R 20787494 intron Syp + chr3R 20787599 intron Syp + chr3R_26_20785001 chr3R_20785001 RAL-849 3481 chr3R 20848306 20848357 chr3R 20848446 20848497 13 140 0.0 6.5 3.2 3.1 191 chr3R 20848306 intergenic not near genes chr3R 20848402 intergenic not near genes chr3R 20848497 intergenic not near genes chr3R_13_20845001 chr3R_20845001 RAL-849 3482 chr3R 20850045 20850103 chr3R 20850180 20850238 12 135 0.0 5.5 2.8 3.2 193 chr3R 20850045 intergenic RpS30 + chr3R 20850142 intergenic RpS30 + chr3R 20850238 intergenic RpS30 + chr3R_12_20850001 chr3R_20850001 RAL-849 3483 chr3R 20854429 20854501 chr3R 20859274 20859330 Doc 15 4837 0.5 8.0 4.2 2.9 4901 chr3R 20854429 intron Ir93a - chr3R 20856880 intron Ir93a - chr3R 20859330 exon Ir93a - chr3R_15_20855001 chr3R_20855001 RAL-849 3484 chr3R 20874470 20874548 chr3R 20874605 20874683 13 135 5.5 5.0 5.2 2.1 213 chr3R 20874470 3` UTR TotB + chr3R 20874576 intergenic TotB + chr3R 20874683 intergenic TotB + chr3R_13_20870001 chr3R_20870001 RAL-849 3485 chr3R 20878212 20878240 chr3R 20878479 20878507 10 266 10.5 0.0 5.2 1.6 295 chr3R 20878212 exon TotZ + chr3R 20878360 3` UTR TotZ + chr3R 20878507 3` UTR CR44048 - chr3R_10_20875001 chr3R_20875001 RAL-849 3486 chr3R 20899901 20899934 chr3R 20900047 20900080 8 146 2.0 7.0 4.5 1.5 179 chr3R 20899901 intergenic not near genes chr3R 20899990 intergenic not near genes chr3R 20900080 intergenic not near genes chr3R_8_20895001 chr3R_20895001 RAL-849 3487 chr3R 20901302 20901368 chr3R 20901433 20901503 28 130 9.0 12.0 10.5 2.4 201 chr3R 20901302 intergenic not near genes chr3R 20901402 intergenic not near genes chr3R 20901503 intergenic CG5621 + chr3R_28_20900001 chr3R_20900001 RAL-849 3488 chr3R 20979438 20979516 chr3R 20979564 20979642 31 125 6.0 8.0 7.0 3.9 204 chr3R 20979438 intron Calx + chr3R 20979540 intron Calx + chr3R 20979642 intron Calx + chr3R_31_20975001 chr3R_20975001 RAL-849 3489 chr3R 21107988 21108062 chr3R 21108299 21108373 11 309 5.5 5.0 5.2 1.8 385 chr3R 21107988 intergenic Sec15 -,rtet + chr3R 21108180 intergenic Sec15 -,rtet + chr3R 21108373 intergenic rtet +,Sec15 - chr3R_11_21105001 chr3R_21105001 RAL-849 3490 chr3R 21141630 21141705 chr3R 21150161 21150214 Tirant 20 8524 11.0 9.5 10.2 1.8 8584 chr3R 21141630 intron SNF4Agamma + chr3R 21145922 intron SNF4Agamma + chr3R 21150214 intron SNF4Agamma + chr3R_20_21145001 chr3R_21145001 RAL-849 3491 chr3R 21163248 21163273 chr3R 21163370 21163401 6 125 8.0 18.0 13.0 0.4 153 chr3R 21163248 intron SNF4Agamma + chr3R 21163324 intron SNF4Agamma + chr3R 21163401 intron SNF4Agamma + chr3R_6_21160001 chr3R_21160001 RAL-849 3492 chr3R 21203658 21203727 chr3R 21203793 21203862 37 130 15.5 10.0 12.8 2.7 204 chr3R 21203658 intron SNF4Agamma + chr3R 21203760 intron SNF4Agamma + chr3R 21203862 intron SNF4Agamma + chr3R_37_21200001 chr3R_21200001 RAL-849 3493 chr3R 21240399 21240470 chr3R 21240541 21240612 30 139 9.5 5.5 7.5 3.5 213 chr3R 21240399 intergenic not near genes chr3R 21240506 intergenic not near genes chr3R 21240612 intergenic not near genes chr3R_30_21240001 chr3R_21240001 RAL-849 3494 chr3R 21321461 21321530 chr3R 21321607 21321676 17 145 0.0 7.5 3.8 3.5 215 chr3R 21321461 intron CG16791 - chr3R 21321568 intron CG16791 - chr3R 21321676 intron CG16791 - chr3R_17_21320001 chr3R_21320001 RAL-849 3495 chr3R 21330824 21330901 chr3R 21330965 21331041 19 138 3.5 2.5 3.0 4.8 217 chr3R 21330824 intron CG16791 - chr3R 21330932 intron CG16791 - chr3R 21331041 intron CG16791 - chr3R_19_21330001 chr3R_21330001 RAL-849 3496 chr3R 21343778 21343841 chr3R 21343921 21343984 15 143 10.0 10.0 10.0 1.4 206 chr3R 21343778 intron CG16791 - chr3R 21343881 intron CG16791 - chr3R 21343984 intron CG16791 - chr3R_15_21340001 chr3R_21340001 RAL-849 3497 chr3R 21441329 21441406 chr3R 21441462 21441543 7 135 3.5 1.0 2.2 2.2 214 chr3R 21441329 intergenic lbe - chr3R 21441436 intergenic lbe - chr3R 21441543 intergenic lbe - chr3R_7_21440001 chr3R_21440001 RAL-849 3498 chr3R 21459984 21460042 chr3R 21460149 21460201 16 160 5.0 7.5 6.2 2.2 217 chr3R 21459984 intergenic not near genes chr3R 21460092 intergenic not near genes chr3R 21460201 intergenic not near genes chr3R_16_21460001 chr3R_21460001 RAL-849 3499 chr3R 21460993 21461008 chr3R 21461133 21461148 7 140 6.5 0.0 3.2 1.7 155 chr3R 21460993 intergenic not near genes chr3R 21461070 intergenic not near genes chr3R 21461148 intergenic not near genes chr3R_7_21460001 chr3R_21460001 RAL-849 3500 chr3R 21464359 21464429 chr3R 21464495 21464563 8 135 1.5 4.5 3.0 2.0 204 chr3R 21464359 intergenic not near genes chr3R 21464461 intergenic not near genes chr3R 21464563 intergenic not near genes chr3R_8_21460001 chr3R_21460001 RAL-849 3501 chr3R 21471977 21472028 chr3R 21472108 21472159 21 130 10.5 12.5 11.5 1.7 182 chr3R 21471977 intergenic not near genes chr3R 21472068 intergenic not near genes chr3R 21472159 intergenic not near genes chr3R_21_21470001 chr3R_21470001 RAL-849 3502 chr3R 21506823 21506906 chr3R 21506958 21507036 22 135 7.0 5.0 6.0 3.1 213 chr3R 21506823 intron C15 + chr3R 21506930 intron C15 + chr3R 21507036 intron C15 + chr3R_22_21505001 chr3R_21505001 RAL-849 3503 chr3R 21517980 21518221 chr3R 21518159 21518351 10 145 0.0 0.0 0.0 10.0 371 chr3R 21517980 intergenic not near genes chr3R 21518166 intergenic not near genes chr3R 21518351 intergenic not near genes chr3R_10_21515001 chr3R_21515001 RAL-849 3504 chr3R 21519941 21520127 chr3R 21520092 21520271 29 152 0.0 0.0 0.0 29.0 330 chr3R 21519941 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520271 intergenic not near genes chr3R_29_21520001 chr3R_21520001 RAL-849 3505 chr3R 21595636 21595643 chr3R 21595941 21595948 4 305 14.0 13.0 13.5 0.3 312 chr3R 21595636 intron InR - chr3R 21595792 intron InR - chr3R 21595948 intron InR - chr3R_4_21595001 chr3R_21595001 RAL-849 3506 chr3R 21595647 21595683 chr3R 21595930 21595988 20 302 7.0 10.5 8.8 2.0 341 chr3R 21595647 intron InR - chr3R 21595818 intron InR - chr3R 21595988 intron InR - chr3R_20_21595001 chr3R_21595001 RAL-849 3507 chr3R 21608967 21608975 chr3R 21611651 21611658 NOF 5 2684 14.0 11.0 12.5 0.4 2691 chr3R 21608967 intron InR - chr3R 21610312 intron InR - chr3R 21611658 intron InR - chr3R_5_21610001 chr3R_21610001 RAL-849 3508 chr3R 21608981 21609040 chr3R 21611650 21611655 NOF 19 2669 5.0 10.5 7.8 2.2 2674 chr3R 21608981 intron InR - chr3R 21610318 intron InR - chr3R 21611655 intron InR - chr3R_19_21610001 chr3R_21610001 RAL-849 3509 chr3R 21697812 21697878 chr3R 21697943 21698009 29 130 10.5 8.0 9.2 2.8 197 chr3R 21697812 intron CG31176 - chr3R 21697910 intron CG31176 - chr3R 21698009 intron CG31176 - chr3R_29_21695001 chr3R_21695001 RAL-849 3510 chr3R 21733930 21733957 chr3R 21734083 21734110 6 153 3.0 1.0 2.0 2.0 180 chr3R 21733930 intergenic not near genes chr3R 21734020 intergenic not near genes chr3R 21734110 intergenic not near genes chr3R_6_21730001 chr3R_21730001 RAL-849 3511 chr3R 21761094 21761133 chr3R 21768516 21768574 mdg1 16 7435 13.0 13.0 13.0 1.1 7480 chr3R 21761094 exon CG42335 + chr3R 21764834 intron CG42335 + chr3R 21768574 exon CG42335 + chr3R_16_21760001 chr3R_21760001 RAL-849 3512 chr3R 21761135 21761154 chr3R 21768510 21768565 mdg1 8 7429 9.0 11.5 10.2 0.7 7430 chr3R 21761135 exon CG42335 + chr3R 21764850 intron CG42335 + chr3R 21768565 exon CG42335 + chr3R_8_21760001 chr3R_21760001 RAL-849 3513 chr3R 21784807 21784891 chr3R 21784955 21785039 13 148 5.5 5.0 5.2 2.1 232 chr3R 21784807 3` UTR,3` UTR CASK -,CRG - chr3R 21784923 3` UTR,3` UTR CASK -,CRG - chr3R 21785039 3` UTR,3` UTR CASK -,CRG - chr3R_13_21780001 chr3R_21780001 RAL-849 3514 chr3R 21846743 21846803 chr3R 21846872 21846932 7 129 0.0 1.5 0.8 3.9 189 chr3R 21846743 intergenic CR44087 +,Gr93d - chr3R 21846838 intergenic CR44087 +,Gr93d - chr3R 21846932 intergenic CR44087 +,Gr93d - chr3R_7_21845001 chr3R_21845001 RAL-849 3515 chr3R 21903494 21903635 chr3R 21903624 21903782 12 144 0.0 0.0 0.0 12.0 288 chr3R 21903494 intron CG6678 + chr3R 21903638 intron CG6678 + chr3R 21903782 intron CG6678 + chr3R_12_21900001 chr3R_21900001 RAL-849 3516 chr3R 21904545 21904621 chr3R 21904695 21904771 23 150 3.0 4.5 3.8 4.8 226 chr3R 21904545 intron CG6678 + chr3R 21904658 intron CG6678 + chr3R 21904771 intron CG6678 + chr3R_23_21900001 chr3R_21900001 RAL-849 3517 chr3R 21907534 21907534 chr3R 28831801 28831802 11 6924268 35.0 27.5 31.2 0.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_11_25365001 chr3R_25365001 RAL-849 3518 chr3R 21907535 21907535 chr3R 28831801 28831802 21 6924266 34.5 27.5 31.0 0.7 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_21_25365001 chr3R_25365001 RAL-849 3519 chr3R 21907536 21907536 chr3R 28831801 28831802 27 6924266 34.0 27.5 30.8 0.8 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_27_25365001 chr3R_25365001 RAL-849 3520 chr3R 21923980 21924044 chr3R 21924120 21924167 22 137 0.5 0.5 0.5 14.7 187 chr3R 21923980 intergenic not near genes chr3R 21924074 intergenic not near genes chr3R 21924167 intergenic not near genes chr3R_22_21920001 chr3R_21920001 RAL-849 3521 chr3R 22083766 22083841 chr3R 22083978 22084002 29 201 4.5 3.5 4.0 5.8 236 chr3R 22083766 intergenic CG13408 + chr3R 22083884 intergenic CG13408 + chr3R 22084002 intergenic not near genes chr3R_29_22080001 chr3R_22080001 RAL-849 3522 chr3R 22084568 22084620 chr3R 22084707 22084759 14 139 0.0 9.5 4.8 2.4 191 chr3R 22084568 intergenic not near genes chr3R 22084664 intergenic not near genes chr3R 22084759 intergenic not near genes chr3R_14_22080001 chr3R_22080001 RAL-849 3523 chr3R 22115313 22115384 chr3R 22115761 22115832 15 448 2.0 4.5 3.2 3.6 519 chr3R 22115313 intergenic Ir94a +,Ir94b - chr3R 22115572 exon Ir94b - chr3R 22115832 exon Ir94b - chr3R_15_22115001 chr3R_22115001 RAL-849 3524 chr3R 22117376 22117445 chr3R 22117493 22117570 23 126 4.0 8.5 6.2 3.2 194 chr3R 22117376 intergenic Ir94b -,Ir94c - chr3R 22117473 intergenic Ir94c -,Ir94b - chr3R 22117570 intergenic Ir94c -,Ir94b - chr3R_23_22115001 chr3R_22115001 RAL-849 3525 chr3R 22234636 22234709 chr3R 22236005 22236078 pogo 28 1368 8.5 5.0 6.8 3.6 1442 chr3R 22234636 intron SKIP + chr3R 22235357 intron SKIP + chr3R 22236078 intron SKIP + chr3R_28_22235001 chr3R_22235001 RAL-849 3526 chr3R 22239491 22239522 chr3R 22248582 22248620 roo 10 9097 7.0 1.0 4.0 2.0 9129 chr3R 22239491 intron SKIP + chr3R 22244056 intron SKIP + chr3R 22248620 intron SKIP + chr3R_10_22240001 chr3R_22240001 RAL-849 3527 chr3R 22336051 22336125 chr3R 22336195 22336204 16 138 7.0 2.5 4.8 2.8 153 chr3R 22336051 intron CG5388 - chr3R 22336128 intron CG5388 - chr3R 22336204 intron CG5388 - chr3R_16_22335001 chr3R_22335001 RAL-849 3528 chr3R 22336888 22336918 chr3R 22337020 22337049 9 132 3.5 12.5 8.0 1.0 161 chr3R 22336888 intron CG5388 - chr3R 22336968 intron CG5388 - chr3R 22337049 intron CG5388 - chr3R_9_22335001 chr3R_22335001 RAL-849 3529 chr3R 22356098 22356161 chr3R 22356243 22356294 20 144 12.5 8.5 10.5 1.7 196 chr3R 22356098 exon rdhB + chr3R 22356196 3` UTR rdhB + chr3R 22356294 intergenic rdhB +,Sar1 + chr3R_20_22355001 chr3R_22355001 RAL-849 3530 chr3R 22433053 22433085 chr3R 22433203 22433235 15 150 9.5 12.0 10.8 1.3 182 chr3R 22433053 intron CG13847 - chr3R 22433144 intron CG13847 - chr3R 22433235 intron CG13847 - chr3R_15_22430001 chr3R_22430001 RAL-849 3531 chr3R 22437756 22437779 chr3R 22437896 22437919 5 140 4.0 8.5 6.2 0.7 163 chr3R 22437756 intergenic not near genes chr3R 22437838 intergenic not near genes chr3R 22437919 intergenic not near genes chr3R_5_22435001 chr3R_22435001 RAL-849 3532 chr3R 22437780 22437821 chr3R 22437894 22437961 22 138 3.0 8.0 5.5 3.4 181 chr3R 22437780 intergenic not near genes chr3R 22437870 intergenic not near genes chr3R 22437961 intergenic not near genes chr3R_22_22435001 chr3R_22435001 RAL-849 3533 chr3R 22450509 22450562 chr3R 22453197 22453252 NOF 20 2686 4.5 7.5 6.0 2.9 2743 chr3R 22450509 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453252 intron CG34376 + chr3R_20_22450001 chr3R_22450001 RAL-849 3534 chr3R 22538396 22538470 chr3R 22538531 22538605 28 134 7.0 5.0 6.0 4.0 209 chr3R 22538396 intron CG5326 - chr3R 22538500 intron CG5326 - chr3R 22538605 intron CG5326 - chr3R_28_22535001 chr3R_22535001 RAL-849 3535 chr3R 22580601 22580651 chr3R 22580733 22580784 22 131 9.5 6.5 8.0 2.4 183 chr3R 22580601 intergenic CSN6 +,CG33110 + chr3R 22580692 intergenic CSN6 +,CG33110 + chr3R 22580784 5` UTR CSN6 + chr3R_22_22580001 chr3R_22580001 RAL-849 3536 chr3R 22580652 22580667 chr3R 22580725 22580795 9 115 5.5 6.0 5.8 1.3 143 chr3R 22580652 intergenic CSN6 +,CG33110 + chr3R 22580724 intergenic CSN6 +,CG33110 + chr3R 22580795 5` UTR CSN6 + chr3R_9_22580001 chr3R_22580001 RAL-849 3537 chr3R 22661266 22661304 chr3R 22661379 22661432 17 123 13.5 7.0 10.2 1.5 166 chr3R 22661266 intron wake + chr3R 22661349 intron wake + chr3R 22661432 intron wake + chr3R_17_22660001 chr3R_22660001 RAL-849 3538 chr3R 22675137 22675204 chr3R 22675293 22675360 21 156 5.0 7.0 6.0 3.0 223 chr3R 22675137 intron wake + chr3R 22675248 intron wake + chr3R 22675360 intron wake + chr3R_21_22675001 chr3R_22675001 RAL-849 3539 chr3R 22829755 22829804 chr3R 22829887 22829936 15 132 3.0 6.5 4.8 2.6 181 chr3R 22829755 intergenic not near genes chr3R 22829846 intergenic not near genes chr3R 22829936 intergenic not near genes chr3R_15_22825001 chr3R_22825001 RAL-849 3540 chr3R 22853243 22853296 chr3R 22853370 22853393 17 124 14.5 14.5 14.5 1.1 150 chr3R 22853243 intergenic not near genes chr3R 22853318 intergenic not near genes chr3R 22853393 intergenic not near genes chr3R_17_22850001 chr3R_22850001 RAL-849 3541 chr3R 22860102 22860174 chr3R 22860244 22860315 17 139 0.5 6.5 3.5 3.8 213 chr3R 22860102 intergenic not near genes chr3R 22860208 intergenic not near genes chr3R 22860315 intergenic not near genes chr3R_17_22860001 chr3R_22860001 RAL-849 3542 chr3R 22880558 22880572 chr3R 22880685 22880699 5 127 23.0 11.0 17.0 0.3 141 chr3R 22880558 intergenic not near genes chr3R 22880628 intergenic not near genes chr3R 22880699 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-849 3543 chr3R 22880573 22880613 chr3R 22880684 22880740 12 125 15.0 11.0 13.0 0.9 167 chr3R 22880573 intergenic not near genes chr3R 22880656 intergenic not near genes chr3R 22880740 intergenic not near genes chr3R_12_22880001 chr3R_22880001 RAL-849 3544 chr3R 22880888 22880947 chr3R 22881076 22881135 24 187 5.0 8.0 6.5 3.2 247 chr3R 22880888 intergenic not near genes chr3R 22881012 intergenic not near genes chr3R 22881135 intergenic not near genes chr3R_24_22880001 chr3R_22880001 RAL-849 3545 chr3R 22881191 22881229 chr3R 22884946 22884984 Doc 11 3755 3.5 12.0 7.8 1.2 3793 chr3R 22881191 intergenic not near genes chr3R 22883088 intergenic not near genes chr3R 22884984 intergenic not near genes chr3R_11_22880001 chr3R_22880001 RAL-849 3546 chr3R 22933903 22933913 chr3R 22934043 22934052 4 140 0.0 14.5 7.2 0.5 149 chr3R 22933903 intron klg + chr3R 22933978 intron klg + chr3R 22934052 intron klg + chr3R_4_22930001 chr3R_22930001 RAL-849 3547 chr3R 22934645 22934704 chr3R 22935377 22935436 9 732 23.5 18.5 21.0 0.4 791 chr3R 22934645 intron klg + chr3R 22935040 intron klg + chr3R 22935436 intron klg + chr3R_9_22935001 chr3R_22935001 RAL-849 3548 chr3R 22963815 22963848 chr3R 22963941 22963950 7 116 15.0 4.5 9.8 0.6 135 chr3R 22963815 intergenic CR43655 - chr3R 22963882 intergenic CR43655 - chr3R 22963950 intergenic CR43655 - chr3R_7_22960001 chr3R_22960001 RAL-849 3549 chr3R 22971195 22971271 chr3R 22971339 22971415 22 141 9.5 8.5 9.0 2.2 220 chr3R 22971195 intergenic not near genes chr3R 22971305 intergenic not near genes chr3R 22971415 intergenic not near genes chr3R_22_22970001 chr3R_22970001 RAL-849 3550 chr3R 23082903 23082934 chr3R 23083152 23083163 13 247 19.0 10.5 14.8 0.8 260 chr3R 23082903 intron CG13830 - chr3R 23083033 intron CG13830 - chr3R 23083163 intron CG13830 - chr3R_13_23080001 chr3R_23080001 RAL-849 3551 chr3R 23082940 23082976 chr3R 23083149 23083209 15 239 5.5 9.5 7.5 1.8 269 chr3R 23082940 intron CG13830 - chr3R 23083074 intron CG13830 - chr3R 23083209 intron CG13830 - chr3R_15_23080001 chr3R_23080001 RAL-849 3552 chr3R 23101332 23101411 chr3R 23101473 23101553 28 139 7.0 6.5 6.8 3.6 221 chr3R 23101332 intron CG13830 - chr3R 23101442 intron CG13830 - chr3R 23101553 intron CG13830 - chr3R_28_23100001 chr3R_23100001 RAL-849 3553 chr3R 23113410 23113429 chr3R 23113731 23113741 4 317 21.0 5.0 13.0 0.3 331 chr3R 23113410 intergenic not near genes chr3R 23113576 intergenic Rassf - chr3R 23113741 intergenic Rassf - chr3R_4_23110001 chr3R_23110001 RAL-849 3554 chr3R 23113430 23113482 chr3R 23113730 23113745 8 281 8.0 5.0 6.5 1.1 315 chr3R 23113430 intergenic not near genes chr3R 23113588 intergenic Rassf - chr3R 23113745 intergenic Rassf - chr3R_8_23110001 chr3R_23110001 RAL-849 3555 chr3R 23145803 23145874 chr3R 23145955 23145969 34 149 8.0 13.0 10.5 3.0 166 chr3R 23145803 intergenic not near genes chr3R 23145886 intergenic not near genes chr3R 23145969 intergenic not near genes chr3R_34_23145001 chr3R_23145001 RAL-849 3556 chr3R 23242246 23242322 chr3R 23242376 23242412 23 120 5.5 7.0 6.2 3.2 166 chr3R 23242246 intron CG4467 - chr3R 23242329 intron CG4467 - chr3R 23242412 intron CG4467 - chr3R_23_23240001 chr3R_23240001 RAL-849 3557 chr3R 23356972 23356984 chr3R 23357108 23357120 5 136 11.5 2.0 6.8 0.6 148 chr3R 23356972 intron Sec13 + chr3R 23357046 intron Sec13 + chr3R 23357120 intron Sec13 + chr3R_5_23355001 chr3R_23355001 RAL-849 3558 chr3R 23390918 23390924 chr3R 23391050 23391056 4 132 10.0 4.5 7.2 0.5 138 chr3R 23390918 intergenic CR43387 + chr3R 23390987 intergenic CR43387 + chr3R 23391056 intergenic CR43387 + chr3R_4_23390001 chr3R_23390001 RAL-849 3559 chr3R 23453641 23453703 chr3R 23453769 23453832 33 128 10.5 8.5 9.5 3.1 191 chr3R 23453641 intron CG4374 - chr3R 23453736 intron CG4374 - chr3R 23453832 intron CG4374 - chr3R_33_23450001 chr3R_23450001 RAL-849 3560 chr3R 23511546 23511614 chr3R 23511680 23511748 30 133 7.0 9.0 8.0 3.3 202 chr3R 23511546 intergenic not near genes chr3R 23511647 intergenic not near genes chr3R 23511748 intergenic not near genes chr3R_30_23510001 chr3R_23510001 RAL-849 3561 chr3R 23515523 23515529 chr3R 23516734 23516740 1360 4 1211 4.5 0.0 2.2 1.2 1217 chr3R 23515523 intron Irk2 - chr3R 23516132 intron Irk2 - chr3R 23516740 intron Irk2 - chr3R_4_23515001 chr3R_23515001 RAL-849 3562 chr3R 23558350 23558420 chr3R 23560181 23560251 Bari1 31 1831 5.0 4.0 4.5 5.6 1901 chr3R 23558350 intron beat-IV + chr3R 23559300 intron beat-IV + chr3R 23560251 intron beat-IV + chr3R_31_23555001 chr3R_23555001 RAL-849 3563 chr3R 23565808 23565862 chr3R 23565945 23566018 4 142 6.0 0.5 3.2 1.0 210 chr3R 23565808 intron beat-IV + chr3R 23565913 intron beat-IV + chr3R 23566018 intron beat-IV + chr3R_4_23565001 chr3R_23565001 RAL-849 3564 chr3R 23603992 23604039 chr3R 23604142 23604189 18 150 10.5 4.5 7.5 2.1 197 chr3R 23603992 intron CG10184 - chr3R 23604090 intron CG10184 - chr3R 23604189 intron CG10184 - chr3R_18_23600001 chr3R_23600001 RAL-849 3565 chr3R 23627702 23627736 chr3R 23627834 23627862 4 128 14.0 0.0 7.0 0.5 160 chr3R 23627702 intron CG31145 - chr3R 23627782 intron CG31145 - chr3R 23627862 intron CG31145 - chr3R_4_23625001 chr3R_23625001 RAL-849 3566 chr3R 23677144 23677191 chr3R 23677277 23677286 6 124 7.0 10.0 8.5 0.6 142 chr3R 23677144 intergenic CG13822 + chr3R 23677215 intergenic CG13822 + chr3R 23677286 intergenic CG13822 + chr3R_6_23675001 chr3R_23675001 RAL-849 3567 chr3R 23684654 23684664 chr3R 23685190 23685190 roo 5 533 27.0 12.0 19.5 0.2 536 chr3R 23684654 exon CG18754 + chr3R 23684922 intron CG18754 + chr3R 23685190 exon CG18754 + chr3R_5_23680001 chr3R_23680001 RAL-849 3568 chr3R 23684666 23684728 chr3R 23685184 23685221 roo 31 520 9.5 10.0 9.8 2.9 555 chr3R 23684666 exon CG18754 + chr3R 23684944 intron CG18754 + chr3R 23685221 exon CG18754 + chr3R_31_23680001 chr3R_23680001 RAL-849 3569 chr3R 23714064 23714106 chr3R 23714169 23714246 4 131 6.5 3.5 5.0 0.7 182 chr3R 23714064 intron nau - chr3R 23714155 intron nau - chr3R 23714246 intron nau - chr3R_4_23710001 chr3R_23710001 RAL-849 3570 chr3R 23820594 23820617 chr3R 23820728 23820751 9 134 15.0 11.0 13.0 0.6 157 chr3R 23820594 5` UTR CG34355 + chr3R 23820672 5` UTR CG34355 + chr3R 23820751 5` UTR CG34355 + chr3R_9_23820001 chr3R_23820001 RAL-849 3571 chr3R 23820628 23820655 chr3R 23820727 23820789 8 130 5.0 10.5 7.8 0.9 161 chr3R 23820628 5` UTR CG34355 + chr3R 23820708 5` UTR CG34355 + chr3R 23820789 5` UTR CG34355 + chr3R_8_23820001 chr3R_23820001 RAL-849 3572 chr3R 23835364 23835431 chr3R 23844564 23844629 roo 16 9199 12.0 0.0 6.0 2.3 9265 chr3R 23835364 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844629 intron CG34355 + chr3R_16_23835001 chr3R_23835001 RAL-849 3573 chr3R 23851049 23851081 chr3R 23858766 23858798 opus 11 7717 6.5 15.5 11.0 0.9 7749 chr3R 23851049 3` UTR CG34355 + chr3R 23854924 intergenic not near genes chr3R 23858798 intergenic not near genes chr3R_11_23850001 chr3R_23850001 RAL-849 3574 chr3R 23873937 23873965 chr3R 23874065 23874076 6 120 16.5 28.0 22.2 0.3 139 chr3R 23873937 intron Pli - chr3R 23874006 intron Pli - chr3R 23874076 intron Pli - chr3R_6_23870001 chr3R_23870001 RAL-849 3575 chr3R 23888044 23888109 chr3R 23888180 23888245 20 135 6.0 4.5 5.2 3.2 201 chr3R 23888044 intron Pli - chr3R 23888144 intron Pli - chr3R 23888245 intron Pli - chr3R_20_23885001 chr3R_23885001 RAL-849 3576 chr3R 23944861 23944933 chr3R 23944996 23945068 25 135 6.0 9.5 7.8 2.8 207 chr3R 23944861 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945068 exon CG12268 - chr3R_25_23940001 chr3R_23940001 RAL-849 3577 chr3R 24011624 24011632 chr3R 24011757 24011765 5 133 20.0 0.0 10.0 0.5 141 chr3R 24011624 intron KrT95D - chr3R 24011694 intron KrT95D - chr3R 24011765 intron KrT95D - chr3R_5_24010001 chr3R_24010001 RAL-849 3578 chr3R 24011638 24011680 chr3R 24011755 24011813 5 130 5.5 0.0 2.8 1.3 175 chr3R 24011638 intron KrT95D - chr3R 24011726 intron KrT95D - chr3R 24011813 intron KrT95D - chr3R_5_24010001 chr3R_24010001 RAL-849 3579 chr3R 24072043 24072098 chr3R 24072531 24072586 jockey 19 487 18.5 13.5 16.0 1.1 543 chr3R 24072043 intron 4EHP - chr3R 24072314 intron 4EHP - chr3R 24072586 intron 4EHP - chr3R_19_24070001 chr3R_24070001 RAL-849 3580 chr3R 24076882 24076947 chr3R 24078399 24078444 hobo 19 1515 6.0 10.5 8.2 2.1 1562 chr3R 24076882 intron 4EHP - chr3R 24077663 intron 4EHP - chr3R 24078444 intron 4EHP - chr3R_19_24075001 chr3R_24075001 RAL-849 3581 chr3R 24100407 24100485 chr3R 24100552 24100620 28 145 7.0 8.0 7.5 3.3 213 chr3R 24100407 intron 4EHP - chr3R 24100514 intron 4EHP - chr3R 24100620 intron 4EHP - chr3R_28_24100001 chr3R_24100001 RAL-849 3582 chr3R 24173504 24173579 chr3R 24173636 24173711 17 132 2.5 5.0 3.8 3.5 207 chr3R 24173504 intron CG13606 + chr3R 24173608 intron CG13606 + chr3R 24173711 intron CG13606 + chr3R_17_24170001 chr3R_24170001 RAL-849 3583 chr3R 24199690 24199764 chr3R 24199820 24199889 25 129 4.5 4.0 4.2 4.8 199 chr3R 24199690 intron twin - chr3R 24199790 intron twin - chr3R 24199889 exon twin - chr3R_25_24195001 chr3R_24195001 RAL-849 3584 chr3R 24207180 24207191 chr3R 24212296 24212317 flea 5 5124 29.0 10.5 19.8 0.2 5137 chr3R 24207180 intron twin - chr3R 24209748 intron twin - chr3R 24212317 intron twin - chr3R_5_24205001 chr3R_24205001 RAL-849 3585 chr3R 24207192 24207235 chr3R 24212288 24212361 flea 32 5124 17.0 9.0 13.0 2.3 5169 chr3R 24207192 intron twin - chr3R 24209776 intron twin - chr3R 24212361 intron twin - chr3R_32_24205001 chr3R_24205001 RAL-849 3586 chr3R 24342813 24342873 chr3R 24348461 24348520 25 5637 62.5 53.5 58.0 0.4 5707 chr3R 24342813 intron Ms + chr3R 24345666 3` UTR CG5746 - chr3R 24348520 5` UTR CG5746 - chr3R_25_24345001 chr3R_24345001 RAL-849 3587 chr3R 24431569 24431619 chr3R 24431698 24431748 11 129 8.0 0.0 4.0 2.2 179 chr3R 24431569 intron nAChRalpha1 - chr3R 24431658 intron nAChRalpha1 - chr3R 24431748 intron nAChRalpha1 - chr3R_11_24430001 chr3R_24430001 RAL-849 3588 chr3R 24433429 24433505 chr3R 24433558 24433634 20 129 0.5 7.0 3.8 4.2 205 chr3R 24433429 intron nAChRalpha1 - chr3R 24433532 intron nAChRalpha1 - chr3R 24433634 intron nAChRalpha1 - chr3R_20_24430001 chr3R_24430001 RAL-849 3589 chr3R 24447673 24447757 chr3R 24447810 24447894 9 137 4.5 6.5 5.5 1.4 221 chr3R 24447673 intron nAChRalpha1 - chr3R 24447784 intron nAChRalpha1 - chr3R 24447894 intron nAChRalpha1 - chr3R_9_24445001 chr3R_24445001 RAL-849 3590 chr3R 24479472 24479477 chr3R 24480427 24480432 4 955 18.0 9.0 13.5 0.3 960 chr3R 24479472 intergenic not near genes chr3R 24479952 intergenic not near genes chr3R 24480432 intergenic not near genes chr3R_4_24475001 chr3R_24475001 RAL-849 3591 chr3R 24479485 24479533 chr3R 24480425 24480488 17 953 7.0 9.0 8.0 1.9 1003 chr3R 24479485 intergenic not near genes chr3R 24479986 intergenic not near genes chr3R 24480488 intergenic not near genes chr3R_17_24475001 chr3R_24475001 RAL-849 3592 chr3R 24493020 24493083 chr3R 24493156 24493219 17 136 8.5 8.0 8.2 1.8 199 chr3R 24493020 intergenic not near genes chr3R 24493120 intergenic not near genes chr3R 24493219 intergenic not near genes chr3R_17_24490001 chr3R_24490001 RAL-849 3593 chr3R 24493251 24493305 chr3R 24493529 24493583 BS 17 276 7.5 12.0 9.8 1.6 332 chr3R 24493251 intergenic not near genes chr3R 24493417 intergenic not near genes chr3R 24493583 intergenic not near genes chr3R_17_24490001 chr3R_24490001 RAL-849 3594 chr3R 24495247 24495290 chr3R 24495376 24495419 24 128 17.5 7.0 12.2 1.8 172 chr3R 24495247 intergenic not near genes chr3R 24495333 intergenic not near genes chr3R 24495419 intergenic not near genes chr3R_24_24495001 chr3R_24495001 RAL-849 3595 chr3R 24495292 24495316 chr3R 24495369 24495409 11 119 13.5 6.0 9.8 1.0 117 chr3R 24495292 intergenic not near genes chr3R 24495350 intergenic not near genes chr3R 24495409 intergenic not near genes chr3R_11_24495001 chr3R_24495001 RAL-849 3596 chr3R 24523851 24523857 chr3R 24523987 24523993 6 136 8.5 2.5 5.5 0.9 142 chr3R 24523851 intergenic CG13622 - chr3R 24523922 intergenic CG13622 - chr3R 24523993 intergenic CG13622 - chr3R_6_24520001 chr3R_24520001 RAL-849 3597 chr3R 24523873 24523925 chr3R 24524009 24524061 16 136 5.0 4.5 4.8 2.8 188 chr3R 24523873 intergenic CG13622 - chr3R 24523967 intergenic CG13622 - chr3R 24524061 intergenic CG13622 - chr3R_16_24520001 chr3R_24520001 RAL-849 3598 chr3R 24527769 24527821 chr3R 24527911 24527963 17 141 9.0 6.0 7.5 2.0 194 chr3R 24527769 intergenic CG13618 +,CG6607 + chr3R 24527866 intergenic CG6607 +,CG13618 + chr3R 24527963 intergenic CG6607 +,CG13618 + chr3R_17_24525001 chr3R_24525001 RAL-849 3599 chr3R 24544017 24544032 chr3R 24544143 24544158 7 126 12.0 5.5 8.8 0.7 141 chr3R 24544017 intergenic CG5789 - chr3R 24544088 intergenic CG5789 - chr3R 24544158 intergenic CG5789 - chr3R_7_24540001 chr3R_24540001 RAL-849 3600 chr3R 24594632 24594662 chr3R 24594922 24594952 pogo 14 289 8.0 19.0 13.5 1.0 320 chr3R 24594632 intron mld + chr3R 24594792 intron mld + chr3R 24594952 intron mld + chr3R_14_24590001 chr3R_24590001 RAL-849 3601 chr3R 24667556 24667587 chr3R 24667683 24667714 5 127 10.5 0.0 5.2 0.8 158 chr3R 24667556 intron slo + chr3R 24667635 intron slo + chr3R 24667714 intron slo + chr3R_5_24665001 chr3R_24665001 RAL-849 3602 chr3R 24671177 24671233 chr3R 24671304 24671340 19 123 8.0 6.0 7.0 2.4 163 chr3R 24671177 intron slo + chr3R 24671258 intron slo + chr3R 24671340 intron slo + chr3R_19_24670001 chr3R_24670001 RAL-849 3603 chr3R 24671234 24671252 chr3R 24671303 24671377 10 114 7.0 6.0 6.5 1.3 143 chr3R 24671234 intron slo + chr3R 24671306 intron slo + chr3R 24671377 intron slo + chr3R_10_24670001 chr3R_24670001 RAL-849 3604 chr3R 24691287 24691321 chr3R 24691437 24691471 10 150 6.5 14.5 10.5 0.9 184 chr3R 24691287 intron slo + chr3R 24691379 intron slo + chr3R 24691471 exon slo + chr3R_10_24690001 chr3R_24690001 RAL-849 3605 chr3R 24730049 24730074 chr3R 24732477 24732501 Doc 7 2428 10.0 5.0 7.5 0.8 2452 chr3R 24730049 intron tok + chr3R 24731275 intron tok + chr3R 24732501 intron tok + chr3R_7_24730001 chr3R_24730001 RAL-849 3606 chr3R 24742989 24743055 chr3R 24743124 24743190 12 135 3.5 5.5 4.5 2.2 201 chr3R 24742989 intron tok + chr3R 24743090 intron tok + chr3R 24743190 exon tok + chr3R_12_24740001 chr3R_24740001 RAL-849 3607 chr3R 24787500 24787560 chr3R 24787626 24787686 11 126 3.5 1.0 2.2 3.4 186 chr3R 24787500 intergenic CG5805 - chr3R 24787593 intergenic CG5805 -,Ets96B + chr3R 24787686 intergenic CG5805 -,Ets96B + chr3R_11_24785001 chr3R_24785001 RAL-849 3608 chr3R 24927086 24927147 chr3R 24931927 24931988 Doc 24 4840 7.5 7.0 7.2 2.9 4902 chr3R 24927086 intergenic Trf4-2 + chr3R 24929537 intergenic not near genes chr3R 24931988 intergenic CG11771 + chr3R_24_24925001 chr3R_24925001 RAL-849 3609 chr3R 24974870 24974932 chr3R 24974999 24975061 30 129 7.5 9.5 8.5 3.2 191 chr3R 24974870 intergenic not near genes chr3R 24974966 intergenic not near genes chr3R 24975061 intergenic not near genes chr3R_30_24970001 chr3R_24970001 RAL-849 3610 chr3R 24999981 25000053 chr3R 25000137 25000210 15 157 4.0 7.0 5.5 2.3 229 chr3R 24999981 intron tnc + chr3R 25000096 intron tnc + chr3R 25000210 intron tnc + chr3R_15_25000001 chr3R_25000001 RAL-849 3611 chr3R 25004851 25004921 chr3R 25004984 25005054 16 132 9.5 9.0 9.2 1.6 203 chr3R 25004851 intron tnc + chr3R 25004952 intron tnc + chr3R 25005054 intron tnc + chr3R_16_25000001 chr3R_25000001 RAL-849 3612 chr3R 25041508 25041529 chr3R 25041636 25041657 8 128 2.0 12.0 7.0 1.0 149 chr3R 25041508 intron 5PtaseI - chr3R 25041582 intron 5PtaseI - chr3R 25041657 intron 5PtaseI - chr3R_8_25040001 chr3R_25040001 RAL-849 3613 chr3R 25082254 25082265 chr3R 25082381 25082392 4 127 3.5 12.5 8.0 0.4 138 chr3R 25082254 intergenic fd96Ca + chr3R 25082323 intergenic fd96Ca + chr3R 25082392 intergenic fd96Ca + chr3R_4_25080001 chr3R_25080001 RAL-849 3614 chr3R 25125993 25126055 chr3R 25126637 25126699 10 644 33.5 37.5 35.5 0.3 706 chr3R 25125993 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126346 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126699 3` UTR,exon CG42503 -,Mocs2 - chr3R_10_25125001 chr3R_25125001 RAL-849 3615 chr3R 25154128 25154198 chr3R 25154255 25154311 18 125 4.5 5.5 5.0 3.0 183 chr3R 25154128 intergenic not near genes chr3R 25154220 intergenic not near genes chr3R 25154311 intergenic not near genes chr3R_18_25150001 chr3R_25150001 RAL-849 3616 chr3R 25158104 25158178 chr3R 25158324 25158398 17 219 3.5 1.5 2.5 4.9 294 chr3R 25158104 intergenic not near genes chr3R 25158251 intergenic not near genes chr3R 25158398 intergenic not near genes chr3R_17_25155001 chr3R_25155001 RAL-849 3617 chr3R 25207595 25207620 chr3R 25207738 25207763 7 143 11.0 3.0 7.0 0.9 168 chr3R 25207595 intron,intron Cad96Ca -,CG13654 + chr3R 25207679 intron,intron Cad96Ca -,CG13654 + chr3R 25207763 intron,intron Cad96Ca -,CG13654 + chr3R_7_25205001 chr3R_25205001 RAL-849 3618 chr3R 25368426 25368505 chr3R 25368594 25368677 18 168 5.5 0.0 2.8 4.7 251 chr3R 25368426 intron Fur1 - chr3R 25368552 intron Fur1 - chr3R 25368677 intron Fur1 - chr3R_18_25365001 chr3R_25365001 RAL-849 3619 chr3R 25411729 25411797 chr3R 25411875 25411950 8 147 4.5 3.0 3.8 1.7 221 chr3R 25411729 intron Fur1 - chr3R 25411840 intron Fur1 - chr3R 25411950 intron Fur1 - chr3R_8_25410001 chr3R_25410001 RAL-849 3620 chr3R 25434950 25435007 chr3R 25435119 25435176 24 169 9.5 6.0 7.8 2.7 226 chr3R 25434950 intron Fur1 - chr3R 25435063 intron Fur1 - chr3R 25435176 intron Fur1 - chr3R_24_25435001 chr3R_25435001 RAL-849 3621 chr3R 25465010 25465081 chr3R 25465137 25465208 4 127 5.5 5.0 5.2 0.6 198 chr3R 25465010 intron Fur1 - chr3R 25465109 intron Fur1 - chr3R 25465208 intron Fur1 - chr3R_4_25465001 chr3R_25465001 RAL-849 3622 chr3R 25520949 25520982 chr3R 25521098 25521131 9 149 15.0 2.5 8.8 0.9 182 chr3R 25520949 intron msi + chr3R 25521040 intron msi + chr3R 25521131 intron msi + chr3R_9_25520001 chr3R_25520001 RAL-849 3623 chr3R 25534957 25535029 chr3R 25535097 25535148 24 134 3.5 5.5 4.5 4.4 191 chr3R 25534957 intron msi + chr3R 25535052 intron msi + chr3R 25535148 intron msi + chr3R_24_25535001 chr3R_25535001 RAL-849 3624 chr3R 25588029 25588101 chr3R 25588157 25588229 23 128 11.5 3.5 7.5 2.7 200 chr3R 25588029 intron msi + chr3R 25588129 intron msi + chr3R 25588229 intron msi + chr3R_23_25585001 chr3R_25585001 RAL-849 3625 chr3R 25597823 25597869 chr3R 25597956 25598003 12 133 5.5 0.5 3.0 3.0 180 chr3R 25597823 intron,intron msi +,ymp - chr3R 25597913 intron,intron msi +,ymp - chr3R 25598003 intron,intron msi +,ymp - chr3R_12_25595001 chr3R_25595001 RAL-849 3626 chr3R 25620993 25621065 chr3R 25621119 25621191 9 126 9.0 9.0 9.0 0.9 198 chr3R 25620993 intron Npl4 - chr3R 25621092 intron Npl4 - chr3R 25621191 intron Npl4 - chr3R_9_25620001 chr3R_25620001 RAL-849 3627 chr3R 25671266 25671274 chr3R 25671416 25671424 6 150 5.5 19.5 12.5 0.4 158 chr3R 25671266 intron Lgr3 + chr3R 25671345 intron Lgr3 + chr3R 25671424 intron Lgr3 + chr3R_6_25670001 chr3R_25670001 RAL-849 3628 chr3R 25689088 25689120 chr3R 25689246 25689278 15 156 13.0 7.0 10.0 1.4 190 chr3R 25689088 intergenic not near genes chr3R 25689183 intergenic not near genes chr3R 25689278 intergenic not near genes chr3R_15_25685001 chr3R_25685001 RAL-849 3629 chr3R 25689124 25689128 chr3R 25689245 25689286 5 151 11.5 6.5 9.0 0.5 162 chr3R 25689124 intergenic not near genes chr3R 25689205 intergenic not near genes chr3R 25689286 intergenic not near genes chr3R_5_25685001 chr3R_25685001 RAL-849 3630 chr3R 25689129 25689151 chr3R 25689277 25689309 10 157 8.5 12.0 10.2 0.9 180 chr3R 25689129 intergenic not near genes chr3R 25689219 intergenic not near genes chr3R 25689309 intergenic not near genes chr3R_10_25685001 chr3R_25685001 RAL-849 3631 chr3R 25692016 25692066 chr3R 25692152 25692203 14 136 3.5 11.0 7.2 1.7 187 chr3R 25692016 intergenic not near genes chr3R 25692110 intergenic not near genes chr3R 25692203 intergenic not near genes chr3R_14_25690001 chr3R_25690001 RAL-849 3632 chr3R 25725792 25725854 chr3R 25735002 25735064 roo 19 9210 4.5 10.5 7.5 2.2 9272 chr3R 25725792 intron LpR2 - chr3R 25730428 intron LpR2 - chr3R 25735064 intron LpR2 - chr3R_19_25730001 chr3R_25730001 RAL-849 3633 chr3R 25736213 25736279 chr3R 25736352 25736418 34 139 5.5 13.0 9.2 3.3 205 chr3R 25736213 intron LpR2 - chr3R 25736316 intron LpR2 - chr3R 25736418 intron LpR2 - chr3R_34_25735001 chr3R_25735001 RAL-849 3634 chr3R 25765830 25765908 chr3R 25765959 25766002 32 125 9.5 9.5 9.5 3.0 172 chr3R 25765830 intergenic not near genes chr3R 25765916 intergenic not near genes chr3R 25766002 intergenic not near genes chr3R_32_25765001 chr3R_25765001 RAL-849 3635 chr3R 25832656 25832677 chr3R 25841888 25841909 roo 6 9232 11.0 9.0 10.0 0.5 9253 chr3R 25832656 exon alpha4GT2 + chr3R 25837282 intron alpha4GT2 + chr3R 25841909 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-849 3636 chr3R 25832680 25832712 chr3R 25841885 25841944 roo 13 9228 4.5 8.0 6.2 1.8 9264 chr3R 25832680 exon alpha4GT2 + chr3R 25837312 intron alpha4GT2 + chr3R 25841944 exon alpha4GT2 + chr3R_13_25835001 chr3R_25835001 RAL-849 3637 chr3R 25843599 25843663 chr3R 25843779 25843843 16 180 4.0 5.0 4.5 2.9 244 chr3R 25843599 intergenic CR45653 + chr3R 25843721 intergenic CR45653 + chr3R 25843843 intergenic CR45653 + chr3R_16_25840001 chr3R_25840001 RAL-849 3638 chr3R 25861784 25861848 chr3R 25861911 25861975 15 127 6.5 4.5 5.5 2.3 191 chr3R 25861784 intron CG5890 + chr3R 25861880 intron CG5890 + chr3R 25861975 intron CG5890 + chr3R_15_25860001 chr3R_25860001 RAL-849 3639 chr3R 25951771 25951834 chr3R 25952012 25952075 16 240 4.5 9.0 6.8 2.1 304 chr3R 25951771 intron CCAP-R - chr3R 25951923 intron CCAP-R - chr3R 25952075 intron CCAP-R - chr3R_16_25950001 chr3R_25950001 RAL-849 3640 chr3R 26037027 26037069 chr3R 26037164 26037206 12 136 7.0 26.5 16.8 0.7 179 chr3R 26037027 intergenic E(spl)m7-HLH + chr3R 26037116 5` UTR E(spl)m7-HLH + chr3R 26037206 exon E(spl)m7-HLH + chr3R_12_26035001 chr3R_26035001 RAL-849 3641 chr3R 26108783 26108805 chr3R 26117416 26117426 Tirant 5 8630 6.5 0.0 3.2 1.2 8643 chr3R 26108783 5` UTR CG31324 + chr3R 26113104 intron CG31324 + chr3R 26117426 intron CG31324 + chr3R_5_26110001 chr3R_26110001 RAL-849 3642 chr3R 26122415 26122475 chr3R 26122541 26122601 19 126 5.5 13.0 9.2 1.9 186 chr3R 26122415 intron CG31324 + chr3R 26122508 intron CG31324 + chr3R 26122601 intron CG31324 + chr3R_19_26120001 chr3R_26120001 RAL-849 3643 chr3R 26126500 26126564 chr3R 26126636 26126700 26 134 8.5 6.5 7.5 3.1 200 chr3R 26126500 intron CG31324 + chr3R 26126600 intron CG31324 + chr3R 26126700 intron,5` UTR CG31324 +,CG14556 + chr3R_26_26125001 chr3R_26125001 RAL-849 3644 chr3R 26138838 26138904 chr3R 26139435 26139501 28 596 7.0 8.5 7.8 3.2 663 chr3R 26138838 intergenic not near genes chr3R 26139170 intergenic not near genes chr3R 26139501 intergenic not near genes chr3R_28_26135001 chr3R_26135001 RAL-849 3645 chr3R 26285899 26285977 chr3R 26286044 26286073 35 131 8.5 7.5 8.0 3.9 174 chr3R 26285899 intergenic not near genes chr3R 26285986 intergenic not near genes chr3R 26286073 intergenic not near genes chr3R_35_26285001 chr3R_26285001 RAL-849 3646 chr3R 26297138 26297184 chr3R 26297250 26297314 17 128 4.5 9.0 6.8 2.2 176 chr3R 26297138 intergenic not near genes chr3R 26297226 intergenic not near genes chr3R 26297314 intergenic not near genes chr3R_17_26295001 chr3R_26295001 RAL-849 3647 chr3R 26318568 26318625 chr3R 26318708 26318765 20 140 6.0 12.5 9.2 2.0 197 chr3R 26318568 5` UTR CG33970 + chr3R 26318666 5` UTR CG33970 + chr3R 26318765 5` UTR CG33970 + chr3R_20_26315001 chr3R_26315001 RAL-849 3648 chr3R 26338286 26338351 chr3R 26338429 26338494 17 142 7.0 8.0 7.5 2.0 208 chr3R 26338286 intron CG33970 + chr3R 26338390 intron CG33970 + chr3R 26338494 intron CG33970 + chr3R_17_26335001 chr3R_26335001 RAL-849 3649 chr3R 26376283 26376351 chr3R 26385493 26385575 roo 22 9210 8.5 0.0 4.2 4.2 9292 chr3R 26376283 intergenic not near genes chr3R 26380929 intergenic not near genes chr3R 26385575 intergenic not near genes chr3R_22_26380001 chr3R_26380001 RAL-849 3650 chr3R 26387276 26387323 chr3R 26387403 26387438 13 122 10.0 3.5 6.8 1.7 162 chr3R 26387276 intergenic not near genes chr3R 26387357 intergenic not near genes chr3R 26387438 intergenic not near genes chr3R_13_26385001 chr3R_26385001 RAL-849 3651 chr3R 26387336 26387351 chr3R 26387398 26387478 10 120 7.0 5.5 6.2 1.4 142 chr3R 26387336 intergenic not near genes chr3R 26387407 intergenic not near genes chr3R 26387478 intergenic not near genes chr3R_10_26385001 chr3R_26385001 RAL-849 3652 chr3R 26510510 26510520 chr3R 26519621 26519631 roo 6 9111 0.0 16.5 8.2 0.7 9121 chr3R 26510510 intron plum - chr3R 26515070 intron plum - chr3R 26519631 intron,5` UTR plum -,CR45226 + chr3R_6_26515001 chr3R_26515001 RAL-849 3653 chr3R 26540949 26541001 chr3R 26541078 26541130 17 129 9.0 0.0 4.5 3.1 181 chr3R 26540949 intron scrib + chr3R 26541040 intron scrib + chr3R 26541130 intron scrib + chr3R_17_26540001 chr3R_26540001 RAL-849 3654 chr3R 26541982 26542054 chr3R 26542098 26542174 17 113 4.5 6.5 5.5 2.6 192 chr3R 26541982 intron scrib + chr3R 26542078 intron scrib + chr3R 26542174 intron scrib + chr3R_17_26540001 chr3R_26540001 RAL-849 3655 chr3R 26558290 26558302 chr3R 26565652 26565664 Stalker4 5 7361 25.0 16.0 20.5 0.2 7374 chr3R 26558290 intron scrib + chr3R 26561977 intron scrib + chr3R 26565664 intron scrib + chr3R_5_26560001 chr3R_26560001 RAL-849 3656 chr3R 26558303 26558345 chr3R 26565645 26565707 Stalker4 16 7350 12.0 13.5 12.8 1.2 7404 chr3R 26558303 intron scrib + chr3R 26562005 intron scrib + chr3R 26565707 intron scrib + chr3R_16_26560001 chr3R_26560001 RAL-849 3657 chr3R 26574961 26574984 chr3R 26575090 26575113 12 129 13.0 4.5 8.8 1.2 152 chr3R 26574961 exon scrib + chr3R 26575037 exon scrib + chr3R 26575113 intron scrib + chr3R_12_26575001 chr3R_26575001 RAL-849 3658 chr3R 26574985 26575039 chr3R 26575087 26575152 21 125 5.5 4.0 4.8 3.6 167 chr3R 26574985 exon scrib + chr3R 26575068 intron scrib + chr3R 26575152 intron scrib + chr3R_21_26575001 chr3R_26575001 RAL-849 3659 chr3R 26607698 26607706 chr3R 26607824 26607832 5 125 20.0 8.5 14.2 0.3 134 chr3R 26607698 5` UTR CR44951 + chr3R 26607765 5` UTR CR44951 + chr3R 26607832 5` UTR CR44951 + chr3R_5_26605001 chr3R_26605001 RAL-849 3660 chr3R 26607707 26607768 chr3R 26607822 26607894 27 124 8.5 6.5 7.5 3.2 187 chr3R 26607707 5` UTR CR44951 + chr3R 26607800 5` UTR CR44951 + chr3R 26607894 5` UTR CR44951 + chr3R_27_26605001 chr3R_26605001 RAL-849 3661 chr3R 26612903 26612967 chr3R 26613026 26613098 22 130 6.0 7.5 6.8 2.8 195 chr3R 26612903 intergenic not near genes chr3R 26613000 intergenic not near genes chr3R 26613098 intergenic not near genes chr3R_22_26610001 chr3R_26610001 RAL-849 3662 chr3R 26641591 26641601 chr3R 26641728 26641738 6 137 20.0 11.5 15.8 0.4 147 chr3R 26641591 intergenic not near genes chr3R 26641664 intergenic not near genes chr3R 26641738 intergenic not near genes chr3R_6_26640001 chr3R_26640001 RAL-849 3663 chr3R 26641603 26641664 chr3R 26641725 26641790 28 130 8.5 11.0 9.8 2.6 187 chr3R 26641603 intergenic not near genes chr3R 26641696 intergenic not near genes chr3R 26641790 intergenic not near genes chr3R_28_26640001 chr3R_26640001 RAL-849 3664 chr3R 26642704 26642752 chr3R 26643148 26643195 jockey 18 444 11.0 8.5 9.8 1.7 491 chr3R 26642704 intergenic not near genes chr3R 26642950 intergenic not near genes chr3R 26643195 intergenic not near genes chr3R_18_26640001 chr3R_26640001 RAL-849 3665 chr3R 26739270 26739347 chr3R 26739625 26739702 25 344 7.5 6.0 6.8 3.2 432 chr3R 26739270 intergenic not near genes chr3R 26739486 intergenic not near genes chr3R 26739702 intergenic not near genes chr3R_25_26735001 chr3R_26735001 RAL-849 3666 chr3R 26798468 26798538 chr3R 26798604 26798668 23 136 6.0 2.5 4.2 4.4 200 chr3R 26798468 intergenic not near genes chr3R 26798568 intergenic Tl + chr3R 26798668 intergenic Tl + chr3R_23_26795001 chr3R_26795001 RAL-849 3667 chr3R 26810516 26810557 chr3R 26811051 26811087 roo 10 532 11.0 10.5 10.8 0.8 571 chr3R 26810516 intron Tl + chr3R 26810802 intron Tl + chr3R 26811087 intron Tl + chr3R_10_26810001 chr3R_26810001 RAL-849 3668 chr3R 26845532 26845592 chr3R 26845659 26845722 29 128 10.0 7.5 8.8 3.0 190 chr3R 26845532 intron Lerp - chr3R 26845627 intron Lerp - chr3R 26845722 intron Lerp - chr3R_29_26845001 chr3R_26845001 RAL-849 3669 chr3R 26868193 26868211 chr3R 26868320 26868338 9 126 0.0 22.5 11.2 0.7 145 chr3R 26868193 intron His2Av + chr3R 26868266 intron His2Av + chr3R 26868338 intron His2Av + chr3R_9_26865001 chr3R_26865001 RAL-849 3670 chr3R 26898588 26898640 chr3R 26899012 26899064 15 424 3.5 3.5 3.5 3.3 476 chr3R 26898588 intron T48 + chr3R 26898826 intron T48 + chr3R 26899064 intron T48 + chr3R_15_26895001 chr3R_26895001 RAL-849 3671 chr3R 27007359 27007432 chr3R 27016544 27016617 roo 11 9185 9.5 4.5 7.0 1.4 9258 chr3R 27007359 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016617 intron RYa-R + chr3R_11_27010001 chr3R_27010001 RAL-849 3672 chr3R 27027632 27027701 chr3R 27027766 27027833 15 134 8.0 0.0 4.0 3.0 201 chr3R 27027632 intron RYa-R + chr3R 27027732 intron RYa-R + chr3R 27027833 intron RYa-R + chr3R_15_27025001 chr3R_27025001 RAL-849 3673 chr3R 27051619 27051651 chr3R 27051760 27051792 12 141 11.5 0.0 5.8 1.8 173 chr3R 27051619 intron RYa-R + chr3R 27051706 intron RYa-R + chr3R 27051792 intron RYa-R + chr3R_12_27050001 chr3R_27050001 RAL-849 3674 chr3R 27092671 27092746 chr3R 27092900 27092958 19 227 6.5 7.5 7.0 2.4 287 chr3R 27092671 intergenic CG14258 + chr3R 27092814 intergenic CG14258 + chr3R 27092958 intergenic CG14258 + chr3R_19_27090001 chr3R_27090001 RAL-849 3675 chr3R 27140471 27140539 chr3R 27148131 27148177 412 21 7656 15.0 6.5 10.8 1.8 7706 chr3R 27140471 intron CG6051 - chr3R 27144324 intron CG6051 - chr3R 27148177 intron CG6051 - chr3R_21_27140001 chr3R_27140001 RAL-849 3676 chr3R 27300809 27300876 chr3R 27300951 27301014 29 140 3.0 4.5 3.8 6.0 205 chr3R 27300809 intron CG3339 - chr3R 27300912 intron CG3339 - chr3R 27301014 intron CG3339 - chr3R_29_27300001 chr3R_27300001 RAL-849 3677 chr3R 27303500 27303582 chr3R 27303638 27303710 12 131 3.0 0.0 1.5 4.8 210 chr3R 27303500 intron CG3339 - chr3R 27303605 intron CG3339 - chr3R 27303710 intron CG3339 - chr3R_12_27300001 chr3R_27300001 RAL-849 3678 chr3R 27329446 27329497 chr3R 27329572 27329624 12 127 5.0 6.5 5.8 1.8 178 chr3R 27329446 intergenic CG3330 - chr3R 27329535 intergenic CG3330 - chr3R 27329624 intergenic CG3330 - chr3R_12_27325001 chr3R_27325001 RAL-849 3679 chr3R 27342754 27342819 chr3R 27351385 27351450 Tirant 27 8630 8.0 11.0 9.5 2.6 8696 chr3R 27342754 intron CG42534 + chr3R 27347102 intron CG42534 + chr3R 27351450 intron CG42534 + chr3R_27_27345001 chr3R_27345001 RAL-849 3680 chr3R 27377421 27377499 chr3R 27377559 27377637 29 134 4.5 6.5 5.5 4.5 216 chr3R 27377421 3` UTR side - chr3R 27377529 3` UTR side - chr3R 27377637 3` UTR side - chr3R_29_27375001 chr3R_27375001 RAL-849 3681 chr3R 27404897 27404953 chr3R 27405024 27405065 17 125 10.0 5.5 7.8 1.9 168 chr3R 27404897 intron side - chr3R 27404981 intron side - chr3R 27405065 intron side - chr3R_17_27400001 chr3R_27400001 RAL-849 3682 chr3R 27418639 27418706 chr3R 27418793 27418831 4 147 11.5 9.5 10.5 0.3 192 chr3R 27418639 5` UTR side - chr3R 27418735 5` UTR side - chr3R 27418831 5` UTR side - chr3R_4_27415001 chr3R_27415001 RAL-849 3683 chr3R 27426121 27426176 chr3R 27426255 27426303 13 123 2.0 12.5 7.2 1.6 182 chr3R 27426121 intron side - chr3R 27426212 intron side - chr3R 27426303 intron side - chr3R_13_27425001 chr3R_27425001 RAL-849 3684 chr3R 27456089 27456109 chr3R 27456226 27456246 10 135 15.5 5.5 10.5 0.9 157 chr3R 27456089 intergenic not near genes chr3R 27456168 intergenic not near genes chr3R 27456246 intergenic not near genes chr3R_10_27455001 chr3R_27455001 RAL-849 3685 chr3R 27456111 27456119 chr3R 27456222 27456256 8 134 15.5 4.5 10.0 0.7 145 chr3R 27456111 intergenic not near genes chr3R 27456184 intergenic not near genes chr3R 27456256 intergenic not near genes chr3R_8_27455001 chr3R_27455001 RAL-849 3686 chr3R 27456123 27456160 chr3R 27456221 27456297 20 127 8.5 4.5 6.5 2.7 174 chr3R 27456123 intergenic not near genes chr3R 27456210 intergenic not near genes chr3R 27456297 intergenic not near genes chr3R_20_27455001 chr3R_27455001 RAL-849 3687 chr3R 27457820 27457900 chr3R 27457963 27457987 13 133 3.0 3.0 3.0 3.2 167 chr3R 27457820 intergenic not near genes chr3R 27457904 intergenic not near genes chr3R 27457987 intergenic not near genes chr3R_13_27455001 chr3R_27455001 RAL-849 3688 chr3R 27496541 27496594 chr3R 27496696 27496749 25 153 11.5 6.0 8.8 2.6 208 chr3R 27496541 intergenic not near genes chr3R 27496645 intergenic not near genes chr3R 27496749 intergenic not near genes chr3R_25_27495001 chr3R_27495001 RAL-849 3689 chr3R 27521117 27521167 chr3R 27530376 27530426 roo 15 9259 10.0 6.0 8.0 1.7 9309 chr3R 27521117 intron CG12885 + chr3R 27525772 intron CG12885 + chr3R 27530426 intron CG12885 + chr3R_15_27525001 chr3R_27525001 RAL-849 3690 chr3R 27570220 27570294 chr3R 27570355 27570429 32 124 8.5 5.0 6.8 4.1 209 chr3R 27570220 intron wdb - chr3R 27570324 intron wdb - chr3R 27570429 intron wdb - chr3R_32_27570001 chr3R_27570001 RAL-849 3691 chr3R 27574059 27574136 chr3R 27574508 27574557 41 447 6.5 8.0 7.2 5.0 498 chr3R 27574059 intron wdb - chr3R 27574308 intron wdb - chr3R 27574557 intron wdb - chr3R_41_27570001 chr3R_27570001 RAL-849 3692 chr3R 27685735 27685739 chr3R 27685863 27685867 5 128 5.5 10.0 7.8 0.6 132 chr3R 27685735 3` UTR CG31055 - chr3R 27685801 3` UTR CG31055 - chr3R 27685867 3` UTR CG31055 - chr3R_5_27685001 chr3R_27685001 RAL-849 3693 chr3R 27685740 27685792 chr3R 27685842 27685921 22 120 5.5 4.5 5.0 3.7 181 chr3R 27685740 3` UTR CG31055 - chr3R 27685830 3` UTR CG31055 - chr3R 27685921 3` UTR CG31055 - chr3R_22_27685001 chr3R_27685001 RAL-849 3694 chr3R 27705310 27705385 chr3R 27705440 27705515 30 125 7.0 7.5 7.2 3.7 205 chr3R 27705310 exon CG12428 - chr3R 27705412 intron CG12428 - chr3R 27705515 exon CG12428 - chr3R_30_27705001 chr3R_27705001 RAL-849 3695 chr3R 27714350 27714357 chr3R 27714476 27714483 6 126 4.0 5.5 4.8 1.0 133 chr3R 27714350 intergenic not near genes chr3R 27714416 intergenic not near genes chr3R 27714483 intergenic not near genes chr3R_6_27710001 chr3R_27710001 RAL-849 3696 chr3R 27725492 27725594 chr3R 27731004 27731086 I-element 14 5506 0.0 6.0 3.0 3.5 5594 chr3R 27725492 intergenic not near genes chr3R 27728289 intergenic not near genes chr3R 27731086 intergenic not near genes chr3R_14_27725001 chr3R_27725001 RAL-849 3697 chr3R 27779221 27779287 chr3R 27779348 27779414 26 122 6.5 8.5 7.5 3.1 193 chr3R 27779221 exon CG34353 - chr3R 27779318 intron CG34353 - chr3R 27779414 intron CG34353 - chr3R_26_27775001 chr3R_27775001 RAL-849 3698 chr3R 27786835 27786902 chr3R 27787030 27787095 24 194 6.0 7.5 6.8 3.1 260 chr3R 27786835 intron CG34353 - chr3R 27786965 intron CG34353 - chr3R 27787095 intron CG34353 - chr3R_24_27785001 chr3R_27785001 RAL-849 3699 chr3R 27791596 27791647 chr3R 27794796 27794847 Rt1c 10 3196 20.5 15.5 18.0 0.5 3251 chr3R 27791596 intron CG34353 - chr3R 27793222 intron CG34353 - chr3R 27794847 intron CG34353 - chr3R_10_27790001 chr3R_27790001 RAL-849 3700 chr3R 27799889 27799964 chr3R 27800021 27800096 27 132 9.0 7.0 8.0 3.0 207 chr3R 27799889 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800096 intron CG34353 - chr3R_27_27795001 chr3R_27795001 RAL-849 3701 chr3R 27803439 27803456 chr3R 27803567 27803584 10 128 9.5 7.5 8.5 1.1 145 chr3R 27803439 intron CG34353 - chr3R 27803512 intron CG34353 - chr3R 27803584 intron CG34353 - chr3R_10_27800001 chr3R_27800001 RAL-849 3702 chr3R 27856716 27856773 chr3R 27858249 27858306 hopper2 17 1532 7.5 6.0 6.8 2.2 1590 chr3R 27856716 intron CG34353 - chr3R 27857511 intron CG34353 - chr3R 27858306 intron CG34353 - chr3R_17_27855001 chr3R_27855001 RAL-849 3703 chr3R 27862937 27862955 chr3R 27868293 27868311 Transpac 5 5356 0.5 8.0 4.2 1.0 5374 chr3R 27862937 intron CG34353 - chr3R 27865624 intron CG34353 - chr3R 27868311 intron CG34353 - chr3R_5_27865001 chr3R_27865001 RAL-849 3704 chr3R 27875659 27875723 chr3R 27882764 27882828 297 28 7105 9.5 13.0 11.2 2.3 7169 chr3R 27875659 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882828 intron CG34353 - chr3R_28_27875001 chr3R_27875001 RAL-849 3705 chr3R 28002865 28002928 chr3R 28002992 28003055 12 127 4.0 4.5 4.2 2.3 190 chr3R 28002865 intergenic not near genes chr3R 28002960 intergenic not near genes chr3R 28003055 intergenic not near genes chr3R_12_28000001 chr3R_28000001 RAL-849 3706 chr3R 28017914 28017979 chr3R 28018054 28018102 20 136 6.5 5.5 6.0 2.9 188 chr3R 28017914 intergenic not near genes chr3R 28018008 intergenic not near genes chr3R 28018102 intergenic not near genes chr3R_20_28015001 chr3R_28015001 RAL-849 3707 chr3R 28068477 28068515 chr3R 28073969 28074007 I-element 6 5492 0.0 12.0 6.0 0.9 5530 chr3R 28068477 intron CG34362 + chr3R 28071242 intron CG34362 + chr3R 28074007 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-849 3708 chr3R 28097637 28097663 chr3R 28097788 28097820 7 156 9.5 4.0 6.8 0.9 183 chr3R 28097637 intergenic not near genes chr3R 28097728 intergenic not near genes chr3R 28097820 intergenic not near genes chr3R_7_28095001 chr3R_28095001 RAL-849 3709 chr3R 28132446 28132519 chr3R 28132578 28132651 22 127 4.5 3.5 4.0 4.4 205 chr3R 28132446 intergenic not near genes chr3R 28132548 intergenic not near genes chr3R 28132651 intergenic not near genes chr3R_22_28130001 chr3R_28130001 RAL-849 3710 chr3R 28173621 28173696 chr3R 28181101 28181176 mdg1 18 7480 6.0 5.5 5.8 2.6 7555 chr3R 28173621 intron CG34354 + chr3R 28177398 intron CG34354 + chr3R 28181176 intron CG34354 + chr3R_18_28175001 chr3R_28175001 RAL-849 3711 chr3R 28253296 28253325 chr3R 28255856 28255860 jockey 6 2550 11.0 7.0 9.0 0.6 2564 chr3R 28253296 intergenic not near genes chr3R 28254578 intergenic not near genes chr3R 28255860 intergenic not near genes chr3R_6_28250001 chr3R_28250001 RAL-849 3712 chr3R 28253329 28253358 chr3R 28255852 28255918 jockey 11 2553 7.5 6.5 7.0 1.4 2589 chr3R 28253329 intergenic not near genes chr3R 28254624 intergenic not near genes chr3R 28255918 intergenic not near genes chr3R_11_28250001 chr3R_28250001 RAL-849 3713 chr3R 28282949 28283010 chr3R 28283628 28283689 22 679 10.5 15.0 12.8 1.6 740 chr3R 28282949 exon CG34436 + chr3R 28283319 exon CG34436 + chr3R 28283689 intergenic CG34437 +,CG34436 + chr3R_22_28280001 chr3R_28280001 RAL-849 3714 chr3R 28302070 28302121 chr3R 28302559 28302610 jockey 28 489 9.5 16.0 12.8 2.0 540 chr3R 28302070 intergenic not near genes chr3R 28302340 intergenic not near genes chr3R 28302610 intergenic not near genes chr3R_28_28300001 chr3R_28300001 RAL-849 3715 chr3R 28331490 28331528 chr3R 28331619 28331657 11 129 3.0 6.0 4.5 2.0 167 chr3R 28331490 intron larp - chr3R 28331574 intron larp - chr3R 28331657 intron larp - chr3R_11_28330001 chr3R_28330001 RAL-849 3716 chr3R 28390082 28390142 chr3R 28390210 28390232 23 119 3.0 10.0 6.5 3.1 150 chr3R 28390082 intergenic not near genes chr3R 28390157 intergenic not near genes chr3R 28390232 intergenic not near genes chr3R_23_28390001 chr3R_28390001 RAL-849 3717 chr3R 28393653 28393720 chr3R 28393803 28393860 27 147 11.0 6.5 8.8 2.8 207 chr3R 28393653 intergenic not near genes chr3R 28393756 intergenic not near genes chr3R 28393860 intergenic not near genes chr3R_27_28390001 chr3R_28390001 RAL-849 3718 chr3R 28410937 28411000 chr3R 28411079 28411142 20 142 5.5 0.0 2.8 5.3 205 chr3R 28410937 intergenic not near genes chr3R 28411040 intergenic not near genes chr3R 28411142 intergenic not near genes chr3R_20_28410001 chr3R_28410001 RAL-849 3719 chr3R 28415683 28415746 chr3R 28415818 28415881 28 133 8.5 8.5 8.5 2.9 198 chr3R 28415683 intergenic not near genes chr3R 28415782 intergenic not near genes chr3R 28415881 intergenic not near genes chr3R_28_28415001 chr3R_28415001 RAL-849 3720 chr3R 28415750 28415755 chr3R 28415885 28415887 4 134 5.5 22.0 13.8 0.3 137 chr3R 28415750 intergenic not near genes chr3R 28415818 intergenic not near genes chr3R 28415887 intergenic not near genes chr3R_4_28415001 chr3R_28415001 RAL-849 3721 chr3R 28421621 28421629 chr3R 28421759 28421762 4 134 18.0 9.5 13.8 0.3 141 chr3R 28421621 intron beat-VI + chr3R 28421692 intron beat-VI + chr3R 28421762 intron beat-VI + chr3R_4_28420001 chr3R_28420001 RAL-849 3722 chr3R 28421632 28421640 chr3R 28421755 28421778 5 128 16.0 9.0 12.5 0.4 146 chr3R 28421632 intron beat-VI + chr3R 28421705 intron beat-VI + chr3R 28421778 intron beat-VI + chr3R_5_28420001 chr3R_28420001 RAL-849 3723 chr3R 28421641 28421684 chr3R 28421748 28421822 24 128 8.0 7.5 7.8 2.7 181 chr3R 28421641 intron beat-VI + chr3R 28421732 intron beat-VI + chr3R 28421822 intron beat-VI + chr3R_24_28420001 chr3R_28420001 RAL-849 3724 chr3R 28551266 28551305 chr3R 28551398 28551437 12 129 5.0 4.0 4.5 2.2 171 chr3R 28551266 intergenic not near genes chr3R 28551352 intergenic not near genes chr3R 28551437 intergenic not near genes chr3R_12_28550001 chr3R_28550001 RAL-849 3725 chr3R 28633152 28633215 chr3R 28633282 28633345 29 130 6.0 9.0 7.5 3.4 193 chr3R 28633152 intron CG10011 - chr3R 28633248 intron CG10011 - chr3R 28633345 intron CG10011 - chr3R_29_28630001 chr3R_28630001 RAL-849 3726 chr3R 28643278 28643308 chr3R 28643415 28643444 9 135 5.0 21.0 13.0 0.6 166 chr3R 28643278 intergenic CG14062 - chr3R 28643361 intergenic CG14062 - chr3R 28643444 intergenic not near genes chr3R_9_28640001 chr3R_28640001 RAL-849 3727 chr3R 28744362 28744429 chr3R 28744507 28744574 37 143 5.5 9.5 7.5 4.4 212 chr3R 28744362 5` UTR AstA-R2 - chr3R 28744468 5` UTR AstA-R2 - chr3R 28744574 5` UTR AstA-R2 - chr3R_37_28740001 chr3R_28740001 RAL-849 3728 chr3R 28758278 28758317 chr3R 28771335 28771374 Stalker4 13 13057 7.0 5.5 6.2 1.8 13096 chr3R 28758278 intergenic aqrs - chr3R 28764826 intergenic not near genes chr3R 28771374 intergenic not near genes chr3R_13_28760001 chr3R_28760001 RAL-849 3729 chr3R 28792817 28792893 chr3R 28797964 28798038 jockey 6 5137 0.5 8.0 4.2 1.2 5221 chr3R 28792817 intergenic not near genes chr3R 28795428 intergenic not near genes chr3R 28798038 intergenic not near genes chr3R_6_28795001 chr3R_28795001 RAL-849 3730 chr3R 28830849 28830914 chr3R 28830977 28831042 21 128 9.5 9.0 9.2 2.1 193 chr3R 28830849 intron WASp - chr3R 28830946 intron WASp - chr3R 28831042 intron WASp - chr3R_21_28830001 chr3R_28830001 RAL-849 3731 chr3R 21907534 21907536 chr3R 28831801 28831802 52 6924266 34.0 27.5 30.8 1.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_52_25365001 chr3R_25365001 RAL-849 3732 chr3R 28862097 28862171 chr3R 28862224 28862298 29 127 6.0 3.5 4.8 5.0 201 chr3R 28862097 intron spg + chr3R 28862198 intron spg + chr3R 28862298 intron spg + chr3R_29_28860001 chr3R_28860001 RAL-849 3733 chr3R 28882870 28882945 chr3R 28883037 28883110 33 166 5.0 1.0 3.0 8.2 240 chr3R 28882870 intron,exon CG33203 -,CG14527 + chr3R 28882990 intron CG33203 - chr3R 28883110 intron CG33203 - chr3R_33_28880001 chr3R_28880001 RAL-849 3734 chr3R 28938463 28938480 chr3R 28938613 28938630 8 150 17.5 0.0 8.8 0.8 167 chr3R 28938463 intron CG14521 - chr3R 28938546 intron CG14521 - chr3R 28938630 intron CG14521 - chr3R_8_28935001 chr3R_28935001 RAL-849 3735 chr3R 28950206 28950246 chr3R 28950337 28950377 11 131 10.5 4.0 7.2 1.3 171 chr3R 28950206 intron CG14521 - chr3R 28950292 intron CG14521 - chr3R 28950377 intron CG14521 - chr3R_11_28950001 chr3R_28950001 RAL-849 3736 chr3R 29046441 29046497 chr3R 29046566 29046576 6 119 8.0 0.0 4.0 1.2 135 chr3R 29046441 3` UTR Pkc98E + chr3R 29046508 3` UTR Pkc98E + chr3R 29046576 3` UTR Pkc98E + chr3R_6_29045001 chr3R_29045001 RAL-849 3737 chr3R 29070006 29070075 chr3R 29070137 29070206 24 131 5.0 8.0 6.5 3.2 200 chr3R 29070006 intron CG11873 + chr3R 29070106 intron CG11873 + chr3R 29070206 intron CG11873 + chr3R_24_29070001 chr3R_29070001 RAL-849 3738 chr3R 29079348 29079406 chr3R 29080770 29080835 NOF 15 1426 8.0 0.0 4.0 3.0 1487 chr3R 29079348 intron CG11873 + chr3R 29080092 intron CG11873 + chr3R 29080835 intron CG11873 + chr3R_15_29080001 chr3R_29080001 RAL-849 3739 chr3R 29090713 29090780 chr3R 29090880 29090906 32 165 10.5 6.0 8.2 3.5 193 chr3R 29090713 intron CG11873 + chr3R 29090810 intron CG11873 + chr3R 29090906 intron CG11873 + chr3R_32_29090001 chr3R_29090001 RAL-849 3740 chr3R 29091382 29091427 chr3R 29091520 29091565 17 133 11.5 16.0 13.8 1.1 183 chr3R 29091382 intron CG11873 + chr3R 29091474 intron CG11873 + chr3R 29091565 intron CG11873 + chr3R_17_29090001 chr3R_29090001 RAL-849 3741 chr3R 29193357 29193391 chr3R 29193483 29193523 15 128 20.0 7.0 13.5 1.0 166 chr3R 29193357 intron CG14509 - chr3R 29193440 intron CG14509 - chr3R 29193523 intron CG14509 - chr3R_15_29190001 chr3R_29190001 RAL-849 3742 chr3R 29203797 29203820 chr3R 29203927 29203950 9 130 18.5 0.0 9.2 0.9 153 chr3R 29203797 5` UTR CG14508 - chr3R 29203874 intron CG14508 - chr3R 29203950 intron CG14508 - chr3R_9_29200001 chr3R_29200001 RAL-849 3743 chr3R 29237230 29237529 chr3R 29239279 29239472 17 2028 41.0 13.0 27.0 0.6 2242 chr3R 29237230 exon CG11951 - chr3R 29238351 intron CG11951 - chr3R 29239472 exon CG31427 - chr3R_17_29235001 chr3R_29235001 RAL-849 3744 chr3R 29239203 29239208 chr3R 29245539 29245549 5 6338 0.0 53.5 26.8 0.2 6346 chr3R 29239203 exon CG31427 - chr3R 29242376 exon CG31445 - chr3R 29245549 exon SP1029 - chr3R_5_29240001 chr3R_29240001 RAL-849 3745 chr3R 29239210 29239240 chr3R 29245525 29245536 7 6317 9.0 45.5 27.2 0.2 6326 chr3R 29239210 exon CG31427 - chr3R 29242373 exon CG31445 - chr3R 29245536 exon SP1029 - chr3R_7_29240001 chr3R_29240001 RAL-849 3746 chr3R 29237522 29237528 chr3R 29239380 29239398 7 1860 41.0 23.5 32.2 0.2 1876 chr3R 29237522 exon CG11951 - chr3R 29238460 intron CG11951 - chr3R 29239398 intron CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-849 3747 chr3R 29240426 29240494 chr3R 29240557 29240628 15 134 3.5 4.0 3.8 3.1 202 chr3R 29240426 intergenic CG31427 -,CG31445 - chr3R 29240527 intergenic CG31445 -,CG31427 - chr3R 29240628 3` UTR CG31445 - chr3R_15_29240001 chr3R_29240001 RAL-849 3748 chr3R 29282285 29282363 chr3R 29285653 29285728 32 3368 71.5 65.0 68.2 0.5 3443 chr3R 29282285 intergenic not near genes chr3R 29284006 intergenic not near genes chr3R 29285728 intergenic not near genes chr3R_32_29280001 chr3R_29280001 RAL-849 3749 chr3R 29319778 29319849 chr3R 29320147 29320218 jockey 14 368 6.0 6.5 6.2 1.9 440 chr3R 29319778 intergenic Cnx99A - chr3R 29319998 intergenic Cnx99A - chr3R 29320218 intergenic not near genes chr3R_14_29315001 chr3R_29315001 RAL-849 3750 chr3R 29325476 29325502 chr3R 29325626 29325640 4 144 1.0 0.0 0.5 2.7 164 chr3R 29325476 intergenic not near genes chr3R 29325558 intergenic not near genes chr3R 29325640 intergenic not near genes chr3R_4_29325001 chr3R_29325001 RAL-849 3751 chr3R 29332232 29332297 chr3R 29332359 29332409 26 126 9.5 4.0 6.8 3.3 177 chr3R 29332232 intergenic not near genes chr3R 29332320 intergenic not near genes chr3R 29332409 intergenic not near genes chr3R_26_29330001 chr3R_29330001 RAL-849 3752 chr3R 29350646 29350689 chr3R 29350791 29350808 9 143 12.0 8.0 10.0 0.8 162 chr3R 29350646 intergenic not near genes chr3R 29350727 intergenic not near genes chr3R 29350808 intergenic not near genes chr3R_9_29350001 chr3R_29350001 RAL-849 3753 chr3R 29356000 29356080 chr3R 29356130 29356211 14 132 0.5 5.5 3.0 3.5 211 chr3R 29356000 intergenic CR45547 - chr3R 29356106 intergenic CR45547 - chr3R 29356211 3` UTR CR45547 - chr3R_14_29355001 chr3R_29355001 RAL-849 3754 chr3R 29406574 29406644 chr3R 29407910 29407945 jockey 12 1327 10.0 4.0 7.0 1.5 1371 chr3R 29406574 intron Ptp99A + chr3R 29407260 intron Ptp99A + chr3R 29407945 intron Ptp99A + chr3R_12_29405001 chr3R_29405001 RAL-849 3755 chr3R 29451115 29451176 chr3R 29451249 29451310 25 134 11.5 5.0 8.2 2.7 195 chr3R 29451115 intron Ptp99A + chr3R 29451212 intron Ptp99A + chr3R 29451310 intron Ptp99A + chr3R_25_29450001 chr3R_29450001 RAL-849 3756 chr3R 29471958 29471989 chr3R 29472100 29472117 9 138 16.5 6.0 11.2 0.7 159 chr3R 29471958 intron Ptp99A + chr3R 29472038 intron Ptp99A + chr3R 29472117 intron Ptp99A + chr3R_9_29470001 chr3R_29470001 RAL-849 3757 chr3R 29471994 29472033 chr3R 29472137 29472176 14 141 6.5 12.5 9.5 1.3 182 chr3R 29471994 intron Ptp99A + chr3R 29472085 intron Ptp99A + chr3R 29472176 intron Ptp99A + chr3R_14_29470001 chr3R_29470001 RAL-849 3758 chr3R 29498603 29498632 chr3R 29498729 29498758 8 122 21.0 12.0 16.5 0.5 155 chr3R 29498603 exon CG2010 + chr3R 29498680 exon CG2010 + chr3R 29498758 3` UTR CG2010 + chr3R_8_29495001 chr3R_29495001 RAL-849 3759 chr3R 29498634 29498679 chr3R 29498728 29498774 26 115 10.5 11.5 11.0 2.2 140 chr3R 29498634 exon CG2010 + chr3R 29498704 3` UTR CG2010 + chr3R 29498774 3` UTR CG2010 + chr3R_26_29495001 chr3R_29495001 RAL-849 3760 chr3R 29505854 29505923 chr3R 29505976 29506050 23 125 6.0 15.0 10.5 2.0 196 chr3R 29505854 intergenic not near genes chr3R 29505952 intergenic not near genes chr3R 29506050 intergenic not near genes chr3R_23_29505001 chr3R_29505001 RAL-849 3761 chr3R 29513007 29513051 chr3R 29513133 29513177 19 126 6.5 12.5 9.5 1.8 170 chr3R 29513007 intergenic not near genes chr3R 29513092 intergenic not near genes chr3R 29513177 intergenic not near genes chr3R_19_29510001 chr3R_29510001 RAL-849 3762 chr3R 29539380 29539423 chr3R 29539506 29539537 18 124 9.5 1.0 5.2 2.9 157 chr3R 29539380 intergenic not near genes chr3R 29539458 intergenic not near genes chr3R 29539537 intergenic not near genes chr3R_18_29535001 chr3R_29535001 RAL-849 3763 chr3R 29547108 29547124 chr3R 29547238 29547254 7 130 4.0 15.5 9.8 0.6 146 chr3R 29547108 intergenic not near genes chr3R 29547181 intergenic not near genes chr3R 29547254 intergenic not near genes chr3R_7_29545001 chr3R_29545001 RAL-849 3764 chr3R 29576746 29576764 chr3R 29576889 29576905 5 143 8.5 8.0 8.2 0.5 159 chr3R 29576746 intergenic not near genes chr3R 29576826 intergenic not near genes chr3R 29576905 intergenic not near genes chr3R_5_29575001 chr3R_29575001 RAL-849 3765 chr3R 29581507 29581563 chr3R 29581638 29581694 6 131 6.5 6.5 6.5 0.8 187 chr3R 29581507 intergenic not near genes chr3R 29581600 intergenic not near genes chr3R 29581694 intergenic not near genes chr3R_6_29580001 chr3R_29580001 RAL-849 3766 chr3R 29604068 29604133 chr3R 29604197 29604252 14 123 9.5 0.5 5.0 2.3 184 chr3R 29604068 intron alph + chr3R 29604160 intron alph + chr3R 29604252 intron alph + chr3R_14_29600001 chr3R_29600001 RAL-849 3767 chr3R 29618743 29618768 chr3R 29618873 29618898 7 130 8.0 3.5 5.8 1.0 155 chr3R 29618743 intergenic CG1907 + chr3R 29618820 intergenic CG1907 + chr3R 29618898 intergenic CG1907 + chr3R_7_29615001 chr3R_29615001 RAL-849 3768 chr3R 29648993 29649013 chr3R 29649103 29649153 12 138 1.5 8.5 5.0 2.0 160 chr3R 29648993 intron Dop1R2 - chr3R 29649073 intron Dop1R2 - chr3R 29649153 intron Dop1R2 - chr3R_12_29645001 chr3R_29645001 RAL-849 3769 chr3R 29655610 29655681 chr3R 29655739 29655808 14 129 6.5 3.5 5.0 2.3 198 chr3R 29655610 intron Dop1R2 - chr3R 29655709 intron Dop1R2 - chr3R 29655808 intron Dop1R2 - chr3R_14_29655001 chr3R_29655001 RAL-849 3770 chr3R 29738217 29738293 chr3R 29739734 29739810 hobo 27 1516 7.5 11.5 9.5 2.6 1593 chr3R 29738217 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739810 5` UTR CG1969 + chr3R_27_29735001 chr3R_29735001 RAL-849 3771 chr3R 29745613 29745667 chr3R 29745724 29745794 23 118 11.0 10.5 10.8 1.9 181 chr3R 29745613 exon IntS11 + chr3R 29745704 intron IntS11 + chr3R 29745794 exon IntS11 + chr3R_23_29745001 chr3R_29745001 RAL-849 3772 chr3R 29760318 29760383 chr3R 29761569 29761634 pogo 23 1251 6.0 0.0 3.0 5.8 1316 chr3R 29760318 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761634 intergenic not near genes chr3R_23_29760001 chr3R_29760001 RAL-849 3773 chr3R 29773829 29773866 chr3R 29773970 29774004 14 138 15.0 0.0 7.5 1.6 175 chr3R 29773829 intron kay + chr3R 29773916 intron kay + chr3R 29774004 intron kay + chr3R_14_29770001 chr3R_29770001 RAL-849 3774 chr3R 29826673 29826691 chr3R 29826817 29826833 6 144 25.0 7.5 16.2 0.3 160 chr3R 29826673 intergenic not near genes chr3R 29826753 intergenic not near genes chr3R 29826833 intergenic Atg16 - chr3R_6_29825001 chr3R_29825001 RAL-849 3775 chr3R 29826694 29826737 chr3R 29826816 29826881 23 136 15.5 7.5 11.5 1.8 187 chr3R 29826694 intergenic not near genes chr3R 29826788 intergenic Atg16 - chr3R 29826881 intergenic Atg16 - chr3R_23_29825001 chr3R_29825001 RAL-849 3776 chr3R 29831763 29831773 chr3R 29831898 29831908 6 135 22.0 5.0 13.5 0.4 145 chr3R 29831763 exon Atg16 - chr3R 29831836 intron Atg16 - chr3R 29831908 intron Atg16 - chr3R_6_29830001 chr3R_29830001 RAL-849 3777 chr3R 29831777 29831836 chr3R 29831897 29831959 28 129 6.5 5.0 5.8 4.1 182 chr3R 29831777 exon Atg16 - chr3R 29831868 intron Atg16 - chr3R 29831959 exon Atg16 - chr3R_28_29830001 chr3R_29830001 RAL-849 3778 chr3R 29880543 29880599 chr3R 29880673 29880734 21 132 7.0 8.5 7.8 2.4 191 chr3R 29880543 intron CG31038 + chr3R 29880638 intron CG31038 + chr3R 29880734 intron CG31038 + chr3R_21_29880001 chr3R_29880001 RAL-849 3779 chr3R 29881976 29882043 chr3R 29891183 29891250 roo 23 9206 9.5 13.0 11.2 1.9 9274 chr3R 29881976 intron CG31038 + chr3R 29886613 intron CG31038 + chr3R 29891250 intron CG31038 + chr3R_23_29885001 chr3R_29885001 RAL-849 3780 chr3R 29950526 29950595 chr3R 29950653 29950717 26 119 10.0 8.5 9.2 2.5 191 chr3R 29950526 intergenic TkR99D - chr3R 29950622 intergenic TkR99D - chr3R 29950717 intergenic TkR99D - chr3R_26_29950001 chr3R_29950001 RAL-849 3781 chr3R 29963431 29963495 chr3R 29963579 29963647 17 151 2.5 0.0 1.2 7.7 216 chr3R 29963431 intron TkR99D - chr3R 29963539 intron TkR99D - chr3R 29963647 intron TkR99D - chr3R_17_29960001 chr3R_29960001 RAL-849 3782 chr3R 29966014 29966061 chr3R 29966144 29966188 16 128 6.0 15.0 10.5 1.4 174 chr3R 29966014 intron TkR99D - chr3R 29966101 intron TkR99D - chr3R 29966188 intron TkR99D - chr3R_16_29965001 chr3R_29965001 RAL-849 3783 chr3R 29980771 29980834 chr3R 29980899 29980962 21 128 5.0 0.5 2.8 5.5 191 chr3R 29980771 intergenic not near genes chr3R 29980866 intergenic not near genes chr3R 29980962 intergenic not near genes chr3R_21_29980001 chr3R_29980001 RAL-849 3784 chr3R 30025228 30025308 chr3R 30025354 30025434 7 126 2.0 5.5 3.8 1.5 206 chr3R 30025228 intron Axn + chr3R 30025331 intron Axn + chr3R 30025434 intron Axn + chr3R_7_30025001 chr3R_30025001 RAL-849 3785 chr3R 30032122 30032137 chr3R 30032246 30032248 8 126 21.5 14.5 18.0 0.4 126 chr3R 30032122 intron Axn + chr3R 30032185 intron Axn + chr3R 30032248 intron Axn + chr3R_8_30030001 chr3R_30030001 RAL-849 3786 chr3R 30046289 30046352 chr3R 30046462 30046525 34 173 12.0 8.5 10.2 3.0 236 chr3R 30046289 intergenic RpL32 -,CG7943 + chr3R 30046407 intergenic CG7943 +,RpL32 - chr3R 30046525 5` UTR CG7943 + chr3R_34_30045001 chr3R_30045001 RAL-849 3787 chr3R 30061812 30061867 chr3R 30061940 30061995 16 128 8.5 4.0 6.2 2.2 183 chr3R 30061812 intron sima + chr3R 30061904 intron sima + chr3R 30061995 intron sima + chr3R_16_30060001 chr3R_30060001 RAL-849 3788 chr3R 30083112 30083171 chr3R 30083273 30083332 13 161 1.0 5.0 3.0 3.2 220 chr3R 30083112 intron sima + chr3R 30083222 intron sima + chr3R 30083332 intron sima + chr3R_13_30080001 chr3R_30080001 RAL-849 3789 chr3R 30084816 30084877 chr3R 30086336 30086393 hobo 8 1517 0.0 10.5 5.2 1.3 1577 chr3R 30084816 intron sima + chr3R 30085604 intron sima + chr3R 30086393 intron sima + chr3R_8_30085001 chr3R_30085001 RAL-849 3790 chr3R 30164781 30164845 chr3R 30164915 30164978 12 134 0.0 5.5 2.8 3.2 197 chr3R 30164781 3` UTR CG31030 - chr3R 30164880 3` UTR CG31030 - chr3R 30164978 exon CG31030 - chr3R_12_30160001 chr3R_30160001 RAL-849 3791 chr3R 30170715 30170786 chr3R 30170852 30170918 33 136 9.5 12.0 10.8 2.8 203 chr3R 30170715 intron CG31028 - chr3R 30170816 intron CG31028 - chr3R 30170918 intron CG31028 - chr3R_33_30170001 chr3R_30170001 RAL-849 3792 chr3R 30177695 30177735 chr3R 30177862 30177902 16 167 6.5 10.0 8.2 1.7 207 chr3R 30177695 5` UTR CG1983 - chr3R 30177798 intergenic CG15530 +,CG1983 - chr3R 30177902 5` UTR CG15530 + chr3R_16_30175001 chr3R_30175001 RAL-849 3793 chr3R 30183169 30183236 chr3R 30183328 30183395 17 158 4.0 5.0 4.5 3.1 226 chr3R 30183169 intergenic not near genes chr3R 30183282 intergenic not near genes chr3R 30183395 intergenic CR44262 - chr3R_17_30180001 chr3R_30180001 RAL-849 3794 chr3R 30199378 30199442 chr3R 30199510 30199530 31 130 10.5 12.5 11.5 2.5 152 chr3R 30199378 intron CG9743 - chr3R 30199454 intron CG9743 - chr3R 30199530 intron CG9743 - chr3R_31_30195001 chr3R_30195001 RAL-849 3795 chr3R 30201831 30201900 chr3R 30201961 30202029 19 130 7.5 0.0 3.8 4.0 198 chr3R 30201831 intron CG9743 - chr3R 30201930 intron CG9743 - chr3R 30202029 intron CG9743 - chr3R_19_30200001 chr3R_30200001 RAL-849 3796 chr3R 30203340 30203375 chr3R 30203469 30203504 10 129 5.5 7.5 6.5 1.3 164 chr3R 30203340 intergenic CG9743 - chr3R 30203422 intergenic CG9743 - chr3R 30203504 intergenic not near genes chr3R_10_30200001 chr3R_30200001 RAL-849 3797 chr3R 30209060 30209074 chr3R 30211006 30211020 6 1946 42.5 8.5 25.5 0.2 1960 chr3R 30209060 intergenic RpS7 - chr3R 30210040 exon Anp + chr3R 30211020 exon CecA1 + chr3R_6_30210001 chr3R_30210001 RAL-849 3798 chr3R 30209120 30209138 chr3R 30212356 30212374 6 3236 29.0 16.5 22.8 0.3 3254 chr3R 30209120 intergenic RpS7 - chr3R 30210747 intergenic CecA1 +,Anp + chr3R 30212374 intron CecA2 + chr3R_6_30210001 chr3R_30210001 RAL-849 3799 chr3R 30210521 30210674 chr3R 30210667 30210804 21 141 1.0 0.0 0.5 14.0 283 chr3R 30210521 intergenic Anp +,CecA1 + chr3R 30210662 intergenic CecA1 +,Anp + chr3R 30210804 intergenic CecA1 +,Anp + chr3R_21_30210001 chr3R_30210001 RAL-849 3800 chr3R 30208668 30208679 chr3R 30210926 30210937 4 2258 57.0 24.5 40.8 0.1 2269 chr3R 30208668 intron RpS7 - chr3R 30209802 intergenic Anp + chr3R 30210937 5` UTR CecA1 + chr3R_4_30205001 chr3R_30205001 RAL-849 3801 chr3R 30238719 30238754 chr3R 30239933 30239968 1360 5 1214 10.5 0.0 5.2 0.8 1249 chr3R 30238719 intergenic not near genes chr3R 30239344 intergenic not near genes chr3R 30239968 intergenic not near genes chr3R_5_30235001 chr3R_30235001 RAL-849 3802 chr3R 30267935 30267995 chr3R 30268060 30268131 23 134 9.0 14.0 11.5 1.8 196 chr3R 30267935 intergenic not near genes chr3R 30268033 intergenic not near genes chr3R 30268131 intergenic not near genes chr3R_23_30265001 chr3R_30265001 RAL-849 3803 chr3R 30315590 30315622 chr3R 30315716 30315755 14 132 15.0 11.0 13.0 1.0 165 chr3R 30315590 intron hdc + chr3R 30315672 intron hdc + chr3R 30315755 intron hdc + chr3R_14_30315001 chr3R_30315001 RAL-849 3804 chr3R 30317296 30317313 chr3R 30324930 30324938 roo 7 7635 3.0 1.0 2.0 2.3 7642 chr3R 30317296 intron hdc + chr3R 30321117 intron hdc + chr3R 30324938 intron hdc + chr3R_7_30320001 chr3R_30320001 RAL-849 3805 chr3R 30346979 30347032 chr3R 30347113 30347167 17 133 9.0 9.5 9.2 1.7 188 chr3R 30346979 intron hdc + chr3R 30347073 intron hdc + chr3R 30347167 intron hdc + chr3R_17_30345001 chr3R_30345001 RAL-849 3806 chr3R 30351382 30351426 chr3R 30351505 30351554 23 128 15.5 13.0 14.2 1.5 172 chr3R 30351382 intron hdc + chr3R 30351468 intron hdc + chr3R 30351554 intron hdc + chr3R_23_30350001 chr3R_30350001 RAL-849 3807 chr3R 30375498 30375557 chr3R 30383173 30383232 412 16 7675 15.5 5.0 10.2 1.4 7734 chr3R 30375498 intergenic not near genes chr3R 30379365 intergenic not near genes chr3R 30383232 intergenic not near genes chr3R_16_30375001 chr3R_30375001 RAL-849 3808 chr3R 30396174 30396233 chr3R 30404490 30404549 roo 22 8316 9.5 7.5 8.5 2.3 8375 chr3R 30396174 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404549 5` UTR CR45570 + chr3R_22_30400001 chr3R_30400001 RAL-849 3809 chr3R 30456351 30456420 chr3R 30456481 30456504 33 129 5.0 5.5 5.2 5.3 153 chr3R 30456351 intergenic CG2224 -,aralar1 - chr3R 30456428 intergenic CG2224 - chr3R 30456504 3` UTR CG2224 - chr3R_33_30455001 chr3R_30455001 RAL-849 3810 chr3R 30457973 30458037 chr3R 30458103 30458167 27 129 0.0 7.0 3.5 6.0 194 chr3R 30457973 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458167 intron CG2224 - chr3R_27_30455001 chr3R_30455001 RAL-849 3811 chr3R 30480440 30480458 chr3R 30482952 30482976 jockey 11 2517 22.0 9.5 15.8 0.7 2536 chr3R 30480440 intron PH4alphaEFB + chr3R 30481708 intron PH4alphaEFB + chr3R 30482976 intron PH4alphaEFB + chr3R_11_30480001 chr3R_30480001 RAL-849 3812 chr3R 30480460 30480501 chr3R 30482948 30483019 jockey 18 2514 10.0 8.5 9.2 1.8 2559 chr3R 30480460 intron PH4alphaEFB + chr3R 30481740 intron PH4alphaEFB + chr3R 30483019 intron PH4alphaEFB + chr3R_18_30480001 chr3R_30480001 RAL-849 3813 chr3R 30495273 30495300 chr3R 30495407 30495434 10 133 14.0 8.0 11.0 0.8 161 chr3R 30495273 intron PH4alphaMP - chr3R 30495354 intron PH4alphaMP - chr3R 30495434 intron PH4alphaMP - chr3R_10_30495001 chr3R_30495001 RAL-849 3814 chr3R 30495304 30495348 chr3R 30495405 30495482 17 128 7.5 8.0 7.8 1.9 178 chr3R 30495304 intron PH4alphaMP - chr3R 30495393 intron PH4alphaMP - chr3R 30495482 intron PH4alphaMP - chr3R_17_30495001 chr3R_30495001 RAL-849 3815 chr3R 30521690 30521719 chr3R 30521829 30521858 4 139 8.0 0.0 4.0 0.8 168 chr3R 30521690 intron jdp - chr3R 30521774 intron jdp - chr3R 30521858 intron jdp - chr3R_4_30520001 chr3R_30520001 RAL-849 3816 chr3R 30536469 30536514 chr3R 30536578 30536655 9 127 8.0 0.0 4.0 1.8 186 chr3R 30536469 intron tmod + chr3R 30536562 intron tmod + chr3R 30536655 intron tmod + chr3R_9_30535001 chr3R_30535001 RAL-849 3817 chr3R 30539781 30539834 chr3R 30539908 30539961 15 126 7.0 6.0 6.5 2.0 180 chr3R 30539781 intron tmod + chr3R 30539871 intron tmod + chr3R 30539961 intron tmod + chr3R_15_30535001 chr3R_30535001 RAL-849 3818 chr3R 30571668 30571722 chr3R 30571798 30571852 17 129 3.5 9.0 6.2 2.4 184 chr3R 30571668 intron tmod + chr3R 30571760 intron tmod + chr3R 30571852 exon tmod + chr3R_17_30570001 chr3R_30570001 RAL-849 3819 chr3R 30627563 30627638 chr3R 30627693 30627733 27 122 6.5 12.5 9.5 2.6 170 chr3R 30627563 3` UTR CG2267 - chr3R 30627648 exon CG2267 - chr3R 30627733 exon CG2267 - chr3R_27_30625001 chr3R_30625001 RAL-849 3820 chr3R 30679474 30679550 chr3R 30686993 30687044 blood 31 7517 5.5 4.5 5.0 5.2 7570 chr3R 30679474 intergenic not near genes chr3R 30683259 intergenic not near genes chr3R 30687044 intergenic not near genes chr3R_31_30680001 chr3R_30680001 RAL-849 3821 chr3R 30690112 30690186 chr3R 30690245 30690315 28 132 5.5 5.5 5.5 4.3 203 chr3R 30690112 intergenic not near genes chr3R 30690214 intergenic Spn100A + chr3R 30690315 intergenic Spn100A + chr3R_28_30690001 chr3R_30690001 RAL-849 3822 chr3R 30791879 30791911 chr3R 30792038 30792077 12 163 16.5 10.0 13.2 0.8 198 chr3R 30791879 exon wts - chr3R 30791978 intron wts - chr3R 30792077 exon wts - chr3R_12_30790001 chr3R_30790001 RAL-849 3823 chr3R 30791912 30791928 chr3R 30792030 30792094 8 160 12.0 8.5 10.2 0.7 182 chr3R 30791912 exon wts - chr3R 30792003 intron wts - chr3R 30792094 exon wts - chr3R_8_30790001 chr3R_30790001 RAL-849 3824 chr3R 30818776 30818843 chr3R 30820391 30820458 1360 22 1615 7.0 7.5 7.2 2.7 1682 chr3R 30818776 intron cindr + chr3R 30819617 intron cindr + chr3R 30820458 intron cindr + chr3R_22_30815001 chr3R_30815001 RAL-849 3825 chr3R 30829779 30829841 chr3R 30829936 30829998 27 156 8.0 8.5 8.2 2.9 219 chr3R 30829779 intron CG15544 + chr3R 30829888 intron CG15544 + chr3R 30829998 intron CG15544 + chr3R_27_30825001 chr3R_30825001 RAL-849 3826 chr3R 30855742 30855782 chr3R 30855880 30855920 11 138 5.0 3.0 4.0 2.2 178 chr3R 30855742 intergenic not near genes chr3R 30855831 intergenic not near genes chr3R 30855920 intergenic not near genes chr3R_11_30855001 chr3R_30855001 RAL-849 3827 chr3R 30859357 30859424 chr3R 30859485 30859552 20 128 6.0 3.0 4.5 3.6 195 chr3R 30859357 intergenic not near genes chr3R 30859454 intergenic not near genes chr3R 30859552 intergenic not near genes chr3R_20_30855001 chr3R_30855001 RAL-849 3828 chr3R 30871566 30871590 chr3R 30871699 30871718 9 131 16.5 12.0 14.2 0.6 152 chr3R 30871566 exon CG15545 - chr3R 30871642 exon CG15545 - chr3R 30871718 exon CG15545 - chr3R_9_30870001 chr3R_30870001 RAL-849 3829 chr3R 30871593 30871837 chr3R 30871687 30871963 24 127 5.5 12.0 8.8 2.4 370 chr3R 30871593 exon CG15545 - chr3R 30871778 exon CG15545 - chr3R 30871963 exon CG15545 - chr3R_24_30870001 chr3R_30870001 RAL-849 3830 chr3R 30901383 30901459 chr3R 30901940 30902016 27 557 7.5 5.5 6.5 3.6 633 chr3R 30901383 intron CG33483 - chr3R 30901700 intron CG33483 - chr3R 30902016 exon CG33483 - chr3R_27_30900001 chr3R_30900001 RAL-849 3831 chr3R 30996597 30996663 chr3R 30996871 30996937 32 274 9.5 9.5 9.5 3.0 340 chr3R 30996597 intron 5-HT7 - chr3R 30996767 intron 5-HT7 - chr3R 30996937 intron 5-HT7 - chr3R_32_30995001 chr3R_30995001 RAL-849 3832 chr3R 31000235 31000304 chr3R 31000401 31000465 31 161 11.0 7.0 9.0 3.1 230 chr3R 31000235 intron 5-HT7 - chr3R 31000350 intron 5-HT7 - chr3R 31000465 intron 5-HT7 - chr3R_31_31000001 chr3R_31000001 RAL-849 3833 chr3R 31026440 31026516 chr3R 31026571 31026647 24 129 8.0 6.5 7.2 2.9 207 chr3R 31026440 intergenic not near genes chr3R 31026544 intergenic not near genes chr3R 31026647 intergenic not near genes chr3R_24_31025001 chr3R_31025001 RAL-849 3834 chr3R 31058599 31058676 chr3R 31058901 31058978 27 301 6.0 8.5 7.2 3.3 379 chr3R 31058599 5` UTR dco - chr3R 31058788 intron dco - chr3R 31058978 intron dco - chr3R_27_31055001 chr3R_31055001 RAL-849 3835 chr3R 31069597 31069671 chr3R 31069742 31069816 26 144 5.0 8.0 6.5 3.5 219 chr3R 31069597 intron Sox100B + chr3R 31069706 intron Sox100B + chr3R 31069816 intron Sox100B + chr3R_26_31065001 chr3R_31065001 RAL-849 3836 chr3R 31074190 31074241 chr3R 31081835 31081885 springer 12 7648 9.5 9.5 9.5 1.1 7695 chr3R 31074190 intron Sox100B + chr3R 31078038 intron Sox100B + chr3R 31081885 intron Sox100B + chr3R_12_31075001 chr3R_31075001 RAL-849 3837 chr3R 31137120 31137181 chr3R 31137245 31137283 22 123 4.0 7.5 5.8 3.2 163 chr3R 31137120 intron Gycbeta100B + chr3R 31137202 intron Gycbeta100B + chr3R 31137283 intron Gycbeta100B + chr3R_22_31135001 chr3R_31135001 RAL-849 3838 chr3R 31251491 31251566 chr3R 31251627 31251702 13 136 2.5 7.0 4.8 2.2 211 chr3R 31251491 intron qless - chr3R 31251596 intron qless - chr3R 31251702 exon qless - chr3R_13_31250001 chr3R_31250001 RAL-849 3839 chr3R 31270919 31270931 chr3R 31271054 31271066 8 135 6.5 8.0 7.2 1.0 147 chr3R 31270919 intergenic not near genes chr3R 31270992 intergenic not near genes chr3R 31271066 intergenic not near genes chr3R_8_31270001 chr3R_31270001 RAL-849 3840 chr3R 31279331 31279385 chr3R 31285572 31285626 diver 20 6239 12.5 10.5 11.5 1.6 6295 chr3R 31279331 intergenic not near genes chr3R 31282478 intergenic not near genes chr3R 31285626 intergenic not near genes chr3R_20_31280001 chr3R_31280001 RAL-849 3841 chr3R 31346672 31346686 chr3R 31346801 31346815 6 129 21.5 7.0 14.2 0.4 143 chr3R 31346672 intron CG34347 + chr3R 31346744 intron CG34347 + chr3R 31346815 intron CG34347 + chr3R_6_31345001 chr3R_31345001 RAL-849 3842 chr3R 31346688 31346738 chr3R 31346795 31346867 19 128 9.5 9.0 9.2 1.9 179 chr3R 31346688 intron CG34347 + chr3R 31346778 intron CG34347 + chr3R 31346867 intron CG34347 + chr3R_19_31345001 chr3R_31345001 RAL-849 3843 chr3R 31413052 31413062 chr3R 31418302 31418312 copia 5 5250 17.0 8.5 12.8 0.4 5260 chr3R 31413052 intron Gprk2 + chr3R 31415682 intron Gprk2 + chr3R 31418312 intron Gprk2 + chr3R_5_31415001 chr3R_31415001 RAL-849 3844 chr3R 31413066 31413104 chr3R 31418301 31418354 copia 19 5248 9.5 8.0 8.8 1.9 5288 chr3R 31413066 intron Gprk2 + chr3R 31415710 intron Gprk2 + chr3R 31418354 intron Gprk2 + chr3R_19_31415001 chr3R_31415001 RAL-849 3845 chr3R 31435313 31435391 chr3R 31435515 31435593 33 200 4.5 7.5 6.0 4.7 280 chr3R 31435313 intron Gprk2 + chr3R 31435453 intron Gprk2 + chr3R 31435593 intron Gprk2 + chr3R_33_31435001 chr3R_31435001 RAL-849 3846 chr3R 31522749 31522817 chr3R 31522936 31523004 13 187 4.5 8.0 6.2 1.8 255 chr3R 31522749 3` UTR CR45573 - chr3R 31522876 3` UTR CR45573 - chr3R 31523004 3` UTR CR45573 - chr3R_13_31520001 chr3R_31520001 RAL-849 3847 chr3R 31528196 31528261 chr3R 31528437 31528512 37 248 6.0 9.5 7.8 4.2 316 chr3R 31528196 intergenic not near genes chr3R 31528354 intergenic not near genes chr3R 31528512 intergenic not near genes chr3R_37_31525001 chr3R_31525001 RAL-849 3848 chr3R 31610075 31610139 chr3R 31610211 31610275 29 135 3.5 11.5 7.5 3.4 200 chr3R 31610075 intron CycG - chr3R 31610175 intron CycG - chr3R 31610275 intron CycG - chr3R_29_31610001 chr3R_31610001 RAL-849 3849 chr3R 31643169 31643246 chr3R 31643298 31643375 25 129 5.0 6.0 5.5 3.8 206 chr3R 31643169 intron kek6 + chr3R 31643272 intron kek6 + chr3R 31643375 intron kek6 + chr3R_25_31640001 chr3R_31640001 RAL-849 3850 chr3R 31670561 31670630 chr3R 31670705 31670774 21 144 8.5 10.0 9.2 2.1 213 chr3R 31670561 intron CG1815 + chr3R 31670668 intron CG1815 + chr3R 31670774 5` UTR CG1815 + chr3R_21_31670001 chr3R_31670001 RAL-849 3851 chr3R 31691490 31691553 chr3R 31696306 31696368 Doc 25 4815 12.5 12.0 12.2 1.9 4878 chr3R 31691490 intergenic not near genes chr3R 31693929 intergenic not near genes chr3R 31696368 intergenic not near genes chr3R_25_31690001 chr3R_31690001 RAL-849 3852 chr3R 31699677 31699699 chr3R 31699809 31699826 8 130 16.5 9.5 13.0 0.6 149 chr3R 31699677 intergenic not near genes chr3R 31699752 intergenic not near genes chr3R 31699826 intergenic not near genes chr3R_8_31695001 chr3R_31695001 RAL-849 3853 chr3R 31699704 31699744 chr3R 31699798 31699869 16 120 8.5 10.0 9.2 1.6 165 chr3R 31699704 intergenic not near genes chr3R 31699786 intergenic not near genes chr3R 31699869 intergenic not near genes chr3R_16_31695001 chr3R_31695001 RAL-849 3854 chr3R 31897804 31897874 chr3R 31897989 31898062 12 188 7.5 5.0 6.2 1.7 258 chr3R 31897804 intron heph - chr3R 31897933 intron heph - chr3R 31898062 intron heph - chr3R_12_31895001 chr3R_31895001 RAL-849 3855 chr3R 31911635 31911700 chr3R 31911771 31911836 12 134 8.0 8.5 8.2 1.3 201 chr3R 31911635 intron heph - chr3R 31911736 intron heph - chr3R 31911836 intron heph - chr3R_12_31910001 chr3R_31910001 RAL-849 3856 chr3R 31930518 31930585 chr3R 31930650 31930717 30 130 7.0 13.0 10.0 2.7 199 chr3R 31930518 intron heph - chr3R 31930618 intron heph - chr3R 31930717 intron heph - chr3R_30_31930001 chr3R_31930001 RAL-849 3857 chr3R 31931144 31931210 chr3R 31931277 31931343 18 133 7.5 9.5 8.5 1.9 199 chr3R 31931144 intron heph - chr3R 31931244 intron heph - chr3R 31931343 intron heph - chr3R_18_31930001 chr3R_31930001 RAL-849 3858 chr3R 31957957 31957988 chr3R 31958089 31958120 6 132 0.0 9.5 4.8 1.0 163 chr3R 31957957 intron heph - chr3R 31958038 intron heph - chr3R 31958120 intron heph - chr3R_6_31955001 chr3R_31955001 RAL-849 3859 chr3R 31997953 31998013 chr3R 32005463 32005533 blood 20 7519 3.0 5.0 4.0 4.0 7580 chr3R 31997953 intron heph - chr3R 32001743 intron heph - chr3R 32005533 intron heph - chr3R_20_32000001 chr3R_32000001 RAL-849 3860 chr3R 32016664 32016733 chr3R 32016793 32016862 25 128 7.5 7.5 7.5 2.9 198 chr3R 32016664 5` UTR CR45557 + chr3R 32016763 5` UTR CR45557 + chr3R 32016862 5` UTR CR45557 + chr3R_25_32015001 chr3R_32015001 RAL-849 3861 chr3R 32034216 32034283 chr3R 32034349 32034416 25 132 5.5 7.5 6.5 3.3 200 chr3R 32034216 intergenic not near genes chr3R 32034316 intergenic not near genes chr3R 32034416 intergenic not near genes chr3R_25_32030001 chr3R_32030001 RAL-849 3862 chr3R 32061691 32061764 chr3R 32061985 32062058 30 295 45.5 33.5 39.5 0.7 367 chr3R 32061691 intron Map205 - chr3R 32061874 intron Map205 - chr3R 32062058 intron Map205 - chr3R_30_32060001 chr3R_32060001 RAL-849 3863 chr4 76452 76509 chr4 81945 82002 I-element 11 5492 13.0 4.5 8.8 1.1 5550 chr4 76452 intron pan + chr4 79227 intron pan + chr4 82002 intron pan + chr4_11_75001 chr4_75001 RAL-849 3864 chr4 97418 97486 chr4 97605 97673 25 187 1.0 8.0 4.5 4.5 255 chr4 97418 intron pan + chr4 97546 intron pan + chr4 97673 intron pan + chr4_25_95001 chr4_95001 RAL-849 3865 chr4 257363 257432 chr4 257583 257652 18 220 4.0 7.5 5.8 2.6 289 chr4 257363 exon RhoGAP102A + chr4 257508 intron RhoGAP102A + chr4 257652 intron RhoGAP102A + chr4_18_255001 chr4_255001 RAL-849 3866 chr4 280757 280791 chr4 281437 281471 12 680 11.5 7.5 9.5 1.1 714 chr4 280757 intron Syt7 - chr4 281114 intron Syt7 - chr4 281471 intron Syt7 - chr4_12_280001 chr4_280001 RAL-849 3867 chr4 293824 293890 chr4 294119 294185 16 295 3.5 6.0 4.8 2.8 361 chr4 293824 intron Syt7 - chr4 294004 intron Syt7 - chr4 294185 intron Syt7 - chr4_16_290001 chr4_290001 RAL-849 3868 chr4 314470 314534 chr4 314598 314662 4 128 2.0 3.0 2.5 1.1 192 chr4 314470 intergenic Zip102B -,CG32850 + chr4 314566 intergenic CG32850 +,Zip102B - chr4 314662 intergenic CG32850 + chr4_4_310001 chr4_310001 RAL-849 3869 chr4 319962 320014 chr4 328188 328240 Stalker2 7 8226 6.0 4.0 5.0 1.2 8278 chr4 319962 3` UTR CG32850 + chr4 324101 intron CG32850 + chr4 328240 3` UTR,3` UTR CG32850 +,PMCA - chr4_7_320001 chr4_320001 RAL-849 3870 chr4 368652 368685 chr4 368834 368867 7 182 5.5 2.0 3.8 1.5 215 chr4 368652 intron Hcf + chr4 368760 intron Hcf + chr4 368867 intron Hcf + chr4_7_365001 chr4_365001 RAL-849 3871 chr4 406688 406714 chr4 406832 406858 10 143 11.5 6.0 8.8 1.0 170 chr4 406688 intergenic not near genes chr4 406773 intergenic not near genes chr4 406858 intergenic not near genes chr4_10_405001 chr4_405001 RAL-849 3872 chr4 406715 406758 chr4 406829 406902 15 138 4.0 5.5 4.8 2.6 187 chr4 406715 intergenic not near genes chr4 406808 intergenic not near genes chr4 406902 intergenic not near genes chr4_15_405001 chr4_405001 RAL-849 3873 chr4 418193 418262 chr4 418337 418406 19 144 3.0 6.5 4.8 3.3 213 chr4 418193 intergenic not near genes chr4 418300 intergenic not near genes chr4 418406 intergenic not near genes chr4_19_415001 chr4_415001 RAL-849 3874 chr4 419507 419542 chr4 419688 419723 12 181 50.5 48.0 49.2 0.2 216 chr4 419507 intergenic not near genes chr4 419615 intergenic not near genes chr4 419723 intergenic not near genes chr4_12_415001 chr4_415001 RAL-849 3875 chr4 654324 654390 chr4 654457 654523 15 133 7.0 6.5 6.8 1.9 199 chr4 654324 intron gw - chr4 654424 intron gw - chr4 654523 exon gw - chr4_15_650001 chr4_650001 RAL-849 3876 chr4 671571 671624 chr4 680194 680257 Tirant 26 8630 7.0 10.0 8.5 2.7 8686 chr4 671571 intron CG11360 + chr4 675914 intron CG11360 + chr4 680257 intron CG11360 + chr4_26_675001 chr4_675001 RAL-849 3877 chr4 710575 710645 chr4 710731 710801 40 155 11.0 9.0 10.0 3.6 226 chr4 710575 intron ey + chr4 710688 intron ey + chr4 710801 intron ey + chr4_40_710001 chr4_710001 RAL-849 3878 chr4 896762 896818 chr4 896889 896946 14 128 8.5 8.5 8.5 1.5 184 chr4 896762 intron unc-13 - chr4 896854 intron unc-13 - chr4 896946 intron unc-13 - chr4_14_895001 chr4_895001 RAL-849 3879 chr4 905523 905586 chr4 905645 905718 26 132 10.0 8.0 9.0 2.6 195 chr4 905523 5` UTR unc-13 - chr4 905620 5` UTR unc-13 - chr4 905718 5` UTR unc-13 - chr4_26_905001 chr4_905001 RAL-849 3880 chr4 1231186 1231249 chr4 1231368 1231431 19 180 8.0 7.5 7.8 2.2 245 chr4 1231186 intron Caps + chr4 1231308 intron Caps + chr4 1231431 intron Caps + chr4_19_1230001 chr4_1230001 RAL-849 3881 chr4 1248170 1248201 chr4 1248430 1248451 10 251 48.0 32.0 40.0 0.2 281 chr4 1248170 intron Caps + chr4 1248310 exon Caps + chr4 1248451 exon Caps + chr4_10_1245001 chr4_1245001 RAL-849 3882 chr4 1250510 1250581 chr4 1250646 1250717 25 135 4.0 5.0 4.5 4.5 207 chr4 1250510 intron Caps + chr4 1250614 intron Caps + chr4 1250717 intron Caps + chr4_25_1250001 chr4_1250001 RAL-849 3883 chrX 200997 201062 chrX 201117 201190 16 121 3.5 1.5 2.5 4.6 193 chrX 200997 intergenic not near genes chrX 201094 intergenic not near genes chrX 201190 intergenic not near genes chrX_16_200001 chrX_200001 RAL-849 3884 chrX 295812 295878 chrX 303482 303548 412 23 7669 5.5 6.5 6.0 3.3 7736 chrX 295812 intron CG3777 + chrX 299680 intron CG3777 + chrX 303548 intron CG3777 + chrX_23_295001 chrX_295001 RAL-849 3885 chrX 318433 318489 chrX 323569 323625 flea 17 5136 12.0 10.5 11.2 1.4 5192 chrX 318433 intron,intron CG3777 +,CG32816 - chrX 321029 intron,intron CG3777 +,CG32816 - chrX 323625 intron,intron CG3777 +,CG32816 - chrX_17_320001 chrX_320001 RAL-849 3886 chrX 325595 325639 chrX 325730 325774 19 135 7.5 8.0 7.8 2.2 179 chrX 325595 intron,intron CG3777 +,CG32816 - chrX 325684 intron,intron CG3777 +,CG32816 - chrX 325774 intron,intron CG3777 +,CG32816 - chrX_19_325001 chrX_325001 RAL-849 3887 chrX 367005 367048 chrX 367152 367195 8 142 4.5 6.0 5.2 1.3 190 chrX 367005 intron,5` UTR CG32816 -,yar + chrX 367100 intron CG32816 - chrX 367195 intron CG32816 - chrX_8_365001 chrX_365001 RAL-849 3888 chrX 428377 428442 chrX 434612 434677 3S18 24 6234 11.0 2.0 6.5 3.2 6300 chrX 428377 intron CG32816 - chrX 431527 intron CG32816 - chrX 434677 intron CG32816 - chrX_24_430001 chrX_430001 RAL-849 3889 chrX 440953 441024 chrX 441081 441152 26 128 6.0 10.0 8.0 2.9 199 chrX 440953 intron CG32816 - chrX 441052 intron CG32816 - chrX 441152 intron CG32816 - chrX_26_440001 chrX_440001 RAL-849 3890 chrX 443450 443512 chrX 443582 443644 23 132 6.0 7.5 6.8 2.9 194 chrX 443450 intron CG32816 - chrX 443547 intron CG32816 - chrX 443644 intron CG32816 - chrX_23_440001 chrX_440001 RAL-849 3891 chrX 450314 450389 chrX 450442 450517 23 128 7.5 5.0 6.2 3.2 203 chrX 450314 intron CG32816 - chrX 450416 intron CG32816 - chrX 450517 intron CG32816 - chrX_23_450001 chrX_450001 RAL-849 3892 chrX 494570 494627 chrX 494712 494758 15 140 5.5 11.0 8.2 1.6 188 chrX 494570 intergenic CG17778 + chrX 494664 5` UTR CG17778 + chrX 494758 intron CG17778 + chrX_15_490001 chrX_490001 RAL-849 3893 chrX 551391 551447 chrX 558992 559058 412 25 7609 6.5 9.5 8.0 2.8 7667 chrX 551391 intron Appl + chrX 555224 intron Appl + chrX 559058 intron Appl + chrX_25_555001 chrX_555001 RAL-849 3894 chrX 599000 599012 chrX 599140 599152 8 140 17.5 9.0 13.2 0.6 152 chrX 599000 intron CG13366 - chrX 599076 intron CG13366 - chrX 599152 intron CG13366 - chrX_8_595001 chrX_595001 RAL-849 3895 chrX 599013 599070 chrX 599131 599205 18 138 8.0 5.0 6.5 2.4 192 chrX 599013 intron CG13366 - chrX 599109 intron CG13366 - chrX 599205 intron CG13366 - chrX_18_595001 chrX_595001 RAL-849 3896 chrX 756576 756645 chrX 756885 756954 24 308 5.5 7.0 6.2 3.3 378 chrX 756576 intron CG5254 + chrX 756765 intron CG5254 + chrX 756954 intron CG5254 + chrX_24_755001 chrX_755001 RAL-849 3897 chrX 802245 802318 chrX 802372 802395 22 115 11.5 11.5 11.5 1.8 150 chrX 802245 exon CG13359 - chrX 802320 exon CG13359 - chrX 802395 exon CG13359 - chrX_22_800001 chrX_800001 RAL-849 3898 chrX 812224 812240 chrX 817905 817921 297 8 5681 14.5 6.5 10.5 0.7 5697 chrX 812224 intron CG43867 - chrX 815072 intron CG43867 - chrX 817921 intron CG43867 - chrX_8_815001 chrX_815001 RAL-849 3899 chrX 812241 812291 chrX 817902 817972 297 14 5673 7.0 5.5 6.2 1.9 5731 chrX 812241 intron CG43867 - chrX 815106 intron CG43867 - chrX 817972 intron CG43867 - chrX_14_815001 chrX_815001 RAL-849 3900 chrX 827569 827617 chrX 835411 835459 roo 16 7841 10.5 11.0 10.8 1.4 7890 chrX 827569 intron CG43867 - chrX 831514 intron CG43867 - chrX 835459 intron CG43867 - chrX_16_830001 chrX_830001 RAL-849 3901 chrX 906657 906731 chrX 908496 908539 S-element 34 1837 6.0 14.0 10.0 3.1 1882 chrX 906657 intron CG43867 - chrX 907598 intron CG43867 - chrX 908539 intron CG43867 - chrX_34_905001 chrX_905001 RAL-849 3902 chrX 1024400 1024462 chrX 1024532 1024594 27 131 5.5 7.5 6.5 3.6 194 chrX 1024400 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024497 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024594 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_27_1020001 chrX_1020001 RAL-849 3903 chrX 1033313 1033325 chrX 1040992 1041007 412 4 7682 7.5 4.0 5.8 0.6 7694 chrX 1033313 intron su(w[a]) + chrX 1037160 intron su(w[a]) + chrX 1041007 intron su(w[a]) + chrX_4_1035001 chrX_1035001 RAL-849 3904 chrX 1063715 1063744 chrX 1072558 1072587 roo 7 8843 9.5 5.5 7.5 0.8 8872 chrX 1063715 intron CR44779 + chrX 1068151 intron CR44779 + chrX 1072587 intron CR44779 + chrX_7_1065001 chrX_1065001 RAL-849 3905 chrX 1218482 1218487 chrX 1218626 1218631 4 144 7.0 12.5 9.8 0.4 149 chrX 1218482 3` UTR CG3638 - chrX 1218556 3` UTR CG3638 - chrX 1218631 3` UTR CG3638 - chrX_4_1215001 chrX_1215001 RAL-849 3906 chrX 1357741 1357795 chrX 1367961 1368015 Doc 17 10220 7.0 8.5 7.8 1.9 10274 chrX 1357741 intergenic png - chrX 1362878 intergenic not near genes chrX 1368015 intergenic not near genes chrX_17_1360001 chrX_1360001 RAL-849 3907 chrX 1402232 1402290 chrX 1402628 1402689 24 404 5.5 7.0 6.2 3.3 457 chrX 1402232 intergenic not near genes chrX 1402460 intergenic not near genes chrX 1402689 intergenic not near genes chrX_24_1400001 chrX_1400001 RAL-849 3908 chrX 1428548 1428619 chrX 1428684 1428753 24 133 4.0 7.0 5.5 3.7 205 chrX 1428548 intron futsch + chrX 1428650 intron futsch + chrX 1428753 intron futsch + chrX_24_1425001 chrX_1425001 RAL-849 3909 chrX 1481396 1481415 chrX 1481539 1481558 7 143 14.5 12.0 13.2 0.5 162 chrX 1481396 3` UTR rush + chrX 1481477 intergenic rush +,sta - chrX 1481558 intergenic rush +,sta - chrX_7_1480001 chrX_1480001 RAL-849 3910 chrX 1518003 1518060 chrX 1523445 1523512 jockey 21 5449 5.0 4.5 4.8 3.6 5509 chrX 1518003 intergenic inc + chrX 1520758 intergenic not near genes chrX 1523512 intergenic not near genes chrX_21_1520001 chrX_1520001 RAL-849 3911 chrX 1560623 1560642 chrX 1560753 1560779 7 138 11.5 2.5 7.0 0.9 156 chrX 1560623 intron Mur2B - chrX 1560701 intron Mur2B - chrX 1560779 intron Mur2B - chrX_7_1560001 chrX_1560001 RAL-849 3912 chrX 1627264 1627308 chrX 1627391 1627403 11 120 10.0 13.0 11.5 0.9 139 chrX 1627264 intron,intron Mur2B -,br + chrX 1627334 intron,intron Mur2B -,br + chrX 1627403 intron,intron Mur2B -,br + chrX_11_1625001 chrX_1625001 RAL-849 3913 chrX 1651612 1651642 chrX 1651743 1651773 13 130 15.0 9.5 12.2 1.0 161 chrX 1651612 intron Mur2B - chrX 1651692 intron Mur2B - chrX 1651773 intron Mur2B - chrX_13_1650001 chrX_1650001 RAL-849 3914 chrX 1930492 1930557 chrX 1938113 1938178 opus 18 7621 4.5 5.5 5.0 3.0 7686 chrX 1930492 3` UTR CG11596 + chrX 1934335 intergenic not near genes chrX 1938178 3` UTR CG3857 - chrX_18_1930001 chrX_1930001 RAL-849 3915 chrX 1954845 1954919 chrX 1962835 1962892 Stalker2 20 7973 5.0 5.5 5.2 3.2 8047 chrX 1954845 intron Hr4 + chrX 1958868 intron Hr4 + chrX 1962892 intron Hr4 + chrX_20_1955001 chrX_1955001 RAL-849 3916 chrX 2044967 2045037 chrX 2045094 2045164 27 127 7.5 7.0 7.2 3.3 197 chrX 2044967 intron,3` UTR CG4313 +,moody - chrX 2045066 intron,3` UTR CG4313 +,moody - chrX 2045164 intron,exon CG4313 +,moody - chrX_27_2045001 chrX_2045001 RAL-849 3917 chrX 2098574 2098638 chrX 2098691 2098721 22 120 12.0 15.5 13.8 1.5 147 chrX 2098574 intron csw + chrX 2098648 intron csw + chrX 2098721 intron csw + chrX_22_2095001 chrX_2095001 RAL-849 3918 chrX 2146618 2146677 chrX 2146756 2146820 16 141 9.5 8.5 9.0 1.6 202 chrX 2146618 intron Pgd + chrX 2146719 intron Pgd + chrX 2146820 intron Pgd + chrX_16_2145001 chrX_2145001 RAL-849 3919 chrX 2308795 2308811 chrX 2317428 2317444 Tirant 7 8633 8.5 14.0 11.2 0.6 8649 chrX 2308795 intron phl + chrX 2313120 intron phl + chrX 2317444 intron phl + chrX_7_2310001 chrX_2310001 RAL-849 3920 chrX 2399795 2399860 chrX 2408198 2408238 roo 16 8398 8.5 4.5 6.5 2.1 8443 chrX 2399795 intergenic not near genes chrX 2404016 intergenic not near genes chrX 2408238 intergenic not near genes chrX_16_2400001 chrX_2400001 RAL-849 3921 chrX 2429600 2429666 chrX 2429731 2429797 8 131 0.0 3.5 1.8 2.9 197 chrX 2429600 intergenic not near genes chrX 2429698 intergenic not near genes chrX 2429797 intergenic not near genes chrX_8_2425001 chrX_2425001 RAL-849 3922 chrX 2454421 2454491 chrX 2454551 2454617 23 128 5.5 3.5 4.5 4.2 196 chrX 2454421 intron boi - chrX 2454519 intron boi - chrX 2454617 intron boi - chrX_23_2450001 chrX_2450001 RAL-849 3923 chrX 2482721 2482732 chrX 2482849 2482860 6 128 14.0 5.5 9.8 0.6 139 chrX 2482721 intron trol - chrX 2482790 intron trol - chrX 2482860 intron trol - chrX_6_2480001 chrX_2480001 RAL-849 3924 chrX 2521905 2521935 chrX 2522033 2522063 7 128 6.5 0.0 3.2 1.7 158 chrX 2521905 intron trol - chrX 2521984 intron trol - chrX 2522063 intron trol - chrX_7_2520001 chrX_2520001 RAL-849 3925 chrX 2578779 2578842 chrX 2578921 2578984 15 142 2.0 7.5 4.8 2.6 205 chrX 2578779 intergenic Pdfr +,Vha36-3 - chrX 2578882 intergenic Vha36-3 -,Pdfr + chrX 2578984 intergenic Vha36-3 -,Pdfr + chrX_15_2575001 chrX_2575001 RAL-849 3926 chrX 2823754 2823777 chrX 2832352 2832375 roo 8 8595 10.5 6.5 8.5 0.8 8621 chrX 2823754 intron kirre + chrX 2828064 intron kirre + chrX 2832375 intron kirre + chrX_8_2825001 chrX_2825001 RAL-849 3927 chrX 2844861 2844926 chrX 2852321 2852386 mdg1 28 7460 7.5 4.0 5.8 4.1 7525 chrX 2844861 intron kirre + chrX 2848624 intron kirre + chrX 2852386 intron kirre + chrX_28_2845001 chrX_2845001 RAL-849 3928 chrX 3057343 3057415 chrX 3057670 3057742 19 327 3.5 4.0 3.8 4.0 399 chrX 3057343 intron kirre + chrX 3057542 intron kirre + chrX 3057742 intron kirre + chrX_19_3055001 chrX_3055001 RAL-849 3929 chrX 3057981 3058041 chrX 3058272 3058332 pogo 13 290 4.5 6.5 5.5 2.0 351 chrX 3057981 intron kirre + chrX 3058156 intron kirre + chrX 3058332 intron kirre + chrX_13_3055001 chrX_3055001 RAL-849 3930 chrX 3075580 3075616 chrX 3080942 3080978 Transpac 5 5362 6.0 0.0 3.0 1.2 5398 chrX 3075580 intron kirre + chrX 3078279 intron kirre + chrX 3080978 intron kirre + chrX_5_3075001 chrX_3075001 RAL-849 3931 chrX 3082559 3082606 chrX 3082686 3082713 12 121 8.5 12.5 10.5 1.0 154 chrX 3082559 intron kirre + chrX 3082636 intron kirre + chrX 3082713 intron kirre + chrX_12_3080001 chrX_3080001 RAL-849 3932 chrX 3103453 3103466 chrX 3103589 3103602 5 136 10.0 3.5 6.8 0.6 149 chrX 3103453 intron kirre + chrX 3103528 intron kirre + chrX 3103602 intron kirre + chrX_5_3100001 chrX_3100001 RAL-849 3933 chrX 3109397 3109470 chrX 3109524 3109597 19 127 2.5 3.0 2.8 5.0 200 chrX 3109397 intron kirre + chrX 3109497 intron kirre + chrX 3109597 intron kirre + chrX_19_3105001 chrX_3105001 RAL-849 3934 chrX 3203419 3203484 chrX 3203668 3203733 23 249 8.5 8.0 8.2 2.5 314 chrX 3203419 intron dnc + chrX 3203576 intron dnc + chrX 3203733 intron dnc + chrX_23_3200001 chrX_3200001 RAL-849 3935 chrX 3206440 3206491 chrX 3206569 3206620 7 129 4.0 4.0 4.0 1.4 180 chrX 3206440 intron dnc + chrX 3206530 intron dnc + chrX 3206620 intron dnc + chrX_7_3205001 chrX_3205001 RAL-849 3936 chrX 3218485 3218509 chrX 3227684 3227708 roo 6 9199 1.5 8.0 4.8 1.0 9223 chrX 3218485 intron dnc + chrX 3223096 intron dnc + chrX 3227708 intron dnc + chrX_6_3220001 chrX_3220001 RAL-849 3937 chrX 3264321 3264373 chrX 3264499 3264551 12 176 8.5 6.5 7.5 1.4 230 chrX 3264321 intron dnc + chrX 3264436 intron dnc + chrX 3264551 intron dnc + chrX_12_3260001 chrX_3260001 RAL-849 3938 chrX 3306302 3306371 chrX 3306434 3306503 13 132 7.5 0.5 4.0 2.6 201 chrX 3306302 intron dnc + chrX 3306402 intron dnc + chrX 3306503 intron dnc + chrX_13_3305001 chrX_3305001 RAL-849 3939 chrX 3351771 3351799 chrX 3351893 3351895 10 119 12.5 11.5 12.0 0.8 124 chrX 3351771 intergenic not near genes chrX 3351833 intergenic not near genes chrX 3351895 intergenic not near genes chrX_10_3350001 chrX_3350001 RAL-849 3940 chrX 3351801 3351810 chrX 3351891 3351946 7 122 10.0 11.0 10.5 0.6 145 chrX 3351801 intergenic not near genes chrX 3351874 intergenic not near genes chrX 3351946 intergenic not near genes chrX_7_3350001 chrX_3350001 RAL-849 3941 chrX 3357889 3357904 chrX 3358017 3358033 4 129 7.0 7.5 7.2 0.5 144 chrX 3357889 intergenic not near genes chrX 3357961 intergenic not near genes chrX 3358033 intergenic not near genes chrX_4_3355001 chrX_3355001 RAL-849 3942 chrX 3414291 3414349 chrX 3414468 3414526 17 177 5.5 0.0 2.8 4.5 235 chrX 3414291 intron,intron CR44999 +,CG12535 - chrX 3414408 intron,intron CR44999 +,CG12535 - chrX 3414526 intron,intron CR44999 +,CG12535 - chrX_17_3410001 chrX_3410001 RAL-849 3943 chrX 3414982 3415040 chrX 3421217 3421275 3S18 12 6231 7.0 4.5 5.8 1.8 6293 chrX 3414982 intron,intron CR44999 +,CG12535 - chrX 3418128 intron,intron CR44999 +,CG12535 - chrX 3421275 intron,intron CR44999 +,CG12535 - chrX_12_3415001 chrX_3415001 RAL-849 3944 chrX 3436941 3436972 chrX 3437157 3437189 8 215 0.0 13.0 6.5 1.1 248 chrX 3436941 intron,intron CR44999 +,CG12535 - chrX 3437065 intron,intron CR44999 +,CG12535 - chrX 3437189 intron,intron CR44999 +,CG12535 - chrX_8_3435001 chrX_3435001 RAL-849 3945 chrX 3476314 3476370 chrX 3476447 3476505 9 131 0.0 6.0 3.0 2.2 191 chrX 3476314 intron CR44999 + chrX 3476410 intron CR44999 + chrX 3476505 intron,3` UTR CR44999 +,CG10804 - chrX_9_3475001 chrX_3475001 RAL-849 3946 chrX 3493044 3493116 chrX 3502253 3502322 roo 12 9207 3.0 2.5 2.8 3.2 9278 chrX 3493044 intron,exon CR44999 +,Gas8 - chrX 3497683 intron,intron CR44999 +,Gas8 - chrX 3502322 intron,intron CR44999 +,Gas8 - chrX_12_3495001 chrX_3495001 RAL-849 3947 chrX 3535365 3535430 chrX 3535507 3535571 10 140 4.5 2.0 3.2 2.4 206 chrX 3535365 intron CG32791 - chrX 3535468 intron CG32791 - chrX 3535571 intron CG32791 - chrX_10_3535001 chrX_3535001 RAL-849 3948 chrX 3553463 3553518 chrX 3553596 3553649 9 133 8.0 9.0 8.5 0.9 186 chrX 3553463 intron CG32791 - chrX 3553556 intron CG32791 - chrX 3553649 intron CG32791 - chrX_9_3550001 chrX_3550001 RAL-849 3949 chrX 3555854 3555873 chrX 3555957 3555965 4 95 7.5 5.0 6.2 0.6 111 chrX 3555854 intron CG32791 - chrX 3555910 intron CG32791 - chrX 3555965 intron CG32791 - chrX_4_3555001 chrX_3555001 RAL-849 3950 chrX 3597060 3597131 chrX 3597198 3597269 21 137 2.0 5.5 3.8 4.4 209 chrX 3597060 intron AstA-R1 + chrX 3597164 intron AstA-R1 + chrX 3597269 intron AstA-R1 + chrX_21_3595001 chrX_3595001 RAL-849 3951 chrX 3597509 3597581 chrX 3619727 3619801 roo 12 22218 5.5 9.0 7.2 1.5 22292 chrX 3597509 intron AstA-R1 + chrX 3608655 intron AstA-R1 + chrX 3619801 intron AstA-R1 + chrX_12_3605001 chrX_3605001 RAL-849 3952 chrX 3629810 3629876 chrX 3629945 3630011 11 134 3.0 5.0 4.0 2.2 201 chrX 3629810 intron AstA-R1 + chrX 3629910 intron AstA-R1 + chrX 3630011 intron AstA-R1 + chrX_11_3625001 chrX_3625001 RAL-849 3953 chrX 3636199 3636221 chrX 3636420 3636442 5 221 7.0 7.0 7.0 0.6 243 chrX 3636199 intron AstA-R1 + chrX 3636320 intron AstA-R1 + chrX 3636442 intron AstA-R1 + chrX_5_3635001 chrX_3635001 RAL-849 3954 chrX 3646403 3646420 chrX 3646539 3646556 5 136 3.5 9.0 6.2 0.7 153 chrX 3646403 intron AstA-R1 + chrX 3646480 intron AstA-R1 + chrX 3646556 intron AstA-R1 + chrX_5_3645001 chrX_3645001 RAL-849 3955 chrX 3662438 3662472 chrX 3662572 3662606 13 134 10.5 10.0 10.2 1.2 168 chrX 3662438 intron AstA-R1 + chrX 3662522 intron AstA-R1 + chrX 3662606 intron AstA-R1 + chrX_13_3660001 chrX_3660001 RAL-849 3956 chrX 3726726 3726749 chrX 3730168 3730184 NOF 10 3445 0.0 0.0 0.0 10.0 3458 chrX 3726726 intron tlk + chrX 3728455 intron tlk + chrX 3730184 intron tlk + chrX_10_3725001 chrX_3725001 RAL-849 3957 chrX 3842302 3842348 chrX 3842570 3842616 pogo 16 268 4.5 4.0 4.2 3.1 314 chrX 3842302 intron ec + chrX 3842459 intron ec + chrX 3842616 intron ec + chrX_16_3840001 chrX_3840001 RAL-849 3958 chrX 3862779 3862847 chrX 3862916 3862984 13 137 6.5 7.5 7.0 1.6 205 chrX 3862779 intergenic yin - chrX 3862882 intergenic yin - chrX 3862984 3` UTR yin - chrX_13_3860001 chrX_3860001 RAL-849 3959 chrX 3866056 3866134 chrX 3866183 3866214 26 124 6.0 2.5 4.2 5.0 158 chrX 3866056 intron yin - chrX 3866135 intron yin - chrX 3866214 intron yin - chrX_26_3865001 chrX_3865001 RAL-849 3960 chrX 3880461 3880487 chrX 3880597 3880620 7 136 0.0 14.5 7.2 0.9 159 chrX 3880461 intergenic VhaAC39-1 + chrX 3880540 intergenic VhaAC39-1 + chrX 3880620 intergenic VhaAC39-1 + chrX_7_3880001 chrX_3880001 RAL-849 3961 chrX 3881238 3881287 chrX 3881427 3881476 14 189 11.0 8.5 9.8 1.3 238 chrX 3881238 intron VhaAC39-1 + chrX 3881357 intron VhaAC39-1 + chrX 3881476 exon VhaAC39-1 + chrX_14_3880001 chrX_3880001 RAL-849 3962 chrX 3950768 3950818 chrX 3950898 3950948 10 130 6.5 8.0 7.2 1.2 180 chrX 3950768 intron Vap-33A + chrX 3950858 intron Vap-33A + chrX 3950948 intron Vap-33A + chrX_10_3950001 chrX_3950001 RAL-849 3963 chrX 3986831 3986881 chrX 3994514 3994564 412 10 7683 6.5 9.0 7.8 1.1 7733 chrX 3986831 intergenic not near genes chrX 3990698 intergenic not near genes chrX 3994564 intergenic not near genes chrX_10_3990001 chrX_3990001 RAL-849 3964 chrX 4029487 4029546 chrX 4029727 4029786 17 240 5.0 9.5 7.2 2.1 299 chrX 4029487 intergenic not near genes chrX 4029636 intergenic not near genes chrX 4029786 intergenic not near genes chrX_17_4025001 chrX_4025001 RAL-849 3965 chrX 4039034 4039067 chrX 4039163 4039163 6 120 16.0 15.5 15.8 0.4 129 chrX 4039034 intergenic not near genes chrX 4039098 intergenic not near genes chrX 4039163 intergenic not near genes chrX_6_4035001 chrX_4035001 RAL-849 3966 chrX 4055647 4055659 chrX 4055745 4055792 6 125 6.5 9.0 7.8 0.7 145 chrX 4055647 intergenic not near genes chrX 4055720 intergenic not near genes chrX 4055792 intergenic not near genes chrX_6_4055001 chrX_4055001 RAL-849 3967 chrX 4081065 4081083 chrX 4081207 4081225 6 140 16.0 5.0 10.5 0.5 160 chrX 4081065 intron CG43689 + chrX 4081145 intron CG43689 + chrX 4081225 intron CG43689 + chrX_6_4080001 chrX_4080001 RAL-849 3968 chrX 4081090 4081096 chrX 4081202 4081225 4 131 14.5 4.5 9.5 0.4 135 chrX 4081090 intron CG43689 + chrX 4081158 intron CG43689 + chrX 4081225 intron CG43689 + chrX_4_4080001 chrX_4080001 RAL-849 3969 chrX 4132630 4132689 chrX 4132848 4132902 17 218 5.5 11.0 8.2 1.8 272 chrX 4132630 3` UTR GlcAT-I + chrX 4132766 3` UTR GlcAT-I + chrX 4132902 3` UTR Fas2 - chrX_17_4130001 chrX_4130001 RAL-849 3970 chrX 4157854 4157921 chrX 4164957 4165023 297 11 7102 5.0 6.0 5.5 1.7 7169 chrX 4157854 intron Fas2 - chrX 4161438 intron Fas2 - chrX 4165023 intron Fas2 - chrX_11_4160001 chrX_4160001 RAL-849 3971 chrX 4203466 4203540 chrX 4203596 4203670 17 130 0.0 4.0 2.0 5.7 204 chrX 4203466 5` UTR Fas2 - chrX 4203568 intron Fas2 - chrX 4203670 intron Fas2 - chrX_17_4200001 chrX_4200001 RAL-849 3972 chrX 4209898 4209952 chrX 4210038 4210092 6 140 0.0 7.0 3.5 1.3 194 chrX 4209898 intergenic not near genes chrX 4209995 intergenic not near genes chrX 4210092 intergenic not near genes chrX_6_4205001 chrX_4205001 RAL-849 3973 chrX 4216298 4216334 chrX 4216421 4216463 15 129 9.5 7.0 8.2 1.6 165 chrX 4216298 intergenic not near genes chrX 4216380 intergenic CG15571 - chrX 4216463 intergenic CG15571 - chrX_15_4215001 chrX_4215001 RAL-849 3974 chrX 4229932 4229981 chrX 4230098 4230147 11 165 8.5 5.5 7.0 1.4 215 chrX 4229932 intergenic not near genes chrX 4230040 intergenic not near genes chrX 4230147 intergenic not near genes chrX_11_4230001 chrX_4230001 RAL-849 3975 chrX 4263557 4263626 chrX 4263694 4263763 20 136 5.0 3.5 4.2 3.8 206 chrX 4263557 intergenic not near genes chrX 4263660 intergenic not near genes chrX 4263763 intergenic not near genes chrX_20_4260001 chrX_4260001 RAL-849 3976 chrX 4280593 4280654 chrX 4280781 4280841 8 187 7.5 6.5 7.0 1.0 248 chrX 4280593 intergenic not near genes chrX 4280717 intergenic not near genes chrX 4280841 intergenic not near genes chrX_8_4280001 chrX_4280001 RAL-849 3977 chrX 4343838 4343890 chrX 4344006 4344054 10 167 2.5 9.0 5.8 1.5 216 chrX 4343838 intron norpA + chrX 4343946 intron norpA + chrX 4344054 intron norpA + chrX_10_4340001 chrX_4340001 RAL-849 3978 chrX 4436468 4436486 chrX 4436596 4436619 5 130 5.5 11.0 8.2 0.5 151 chrX 4436468 intron,intron CR32773 -,bi + chrX 4436544 intron,intron CR32773 -,bi + chrX 4436619 intron,intron CR32773 -,bi + chrX_5_4435001 chrX_4435001 RAL-849 3979 chrX 4436488 4436493 chrX 4436594 4436626 4 121 5.5 10.0 7.8 0.5 138 chrX 4436488 intron,intron CR32773 -,bi + chrX 4436557 intron,intron CR32773 -,bi + chrX 4436626 intron,intron CR32773 -,bi + chrX_4_4435001 chrX_4435001 RAL-849 3980 chrX 4525285 4525357 chrX 4525431 4525503 17 143 7.0 7.0 7.0 2.1 218 chrX 4525285 intron CR32773 - chrX 4525394 intron CR32773 - chrX 4525503 intron CR32773 - chrX_17_4525001 chrX_4525001 RAL-849 3981 chrX 4613522 4613570 chrX 4613640 4613701 17 135 6.5 7.0 6.8 2.2 179 chrX 4613522 intergenic not near genes chrX 4613612 intergenic not near genes chrX 4613701 intergenic not near genes chrX_17_4610001 chrX_4610001 RAL-849 3982 chrX 4660775 4660798 chrX 4660924 4660947 7 149 15.5 0.0 7.8 0.8 172 chrX 4660775 intron CG3009 - chrX 4660861 intron CG3009 - chrX 4660947 intron CG3009 - chrX_7_4660001 chrX_4660001 RAL-849 3983 chrX 4700353 4700418 chrX 4700746 4700811 jockey 23 393 3.0 4.5 3.8 4.8 458 chrX 4700353 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700811 3` UTR ctp + chrX_23_4700001 chrX_4700001 RAL-849 3984 chrX 4723523 4723585 chrX 4723653 4723695 22 126 10.0 8.5 9.2 2.2 172 chrX 4723523 exon Proc-R + chrX 4723609 intron Proc-R + chrX 4723695 intron Proc-R + chrX_22_4720001 chrX_4720001 RAL-849 3985 chrX 4763213 4763273 chrX 4763751 4763811 Stalker4 15 534 5.5 5.0 5.2 2.4 598 chrX 4763213 intergenic not near genes chrX 4763512 intergenic not near genes chrX 4763811 intergenic not near genes chrX_15_4760001 chrX_4760001 RAL-849 3986 chrX 4792346 4792395 chrX 4792826 4792878 jockey 16 481 7.0 9.0 8.0 1.8 532 chrX 4792346 intergenic not near genes chrX 4792612 intergenic not near genes chrX 4792878 intergenic not near genes chrX_16_4790001 chrX_4790001 RAL-849 3987 chrX 4827934 4827954 chrX 4835347 4835369 Stalker4 10 7418 11.5 9.0 10.2 0.9 7435 chrX 4827934 intergenic not near genes chrX 4831652 intergenic not near genes chrX 4835369 intergenic not near genes chrX_10_4830001 chrX_4830001 RAL-849 3988 chrX 4827973 4827994 chrX 4835361 4835415 Stalker4 19 7407 7.0 10.5 8.8 1.9 7442 chrX 4827973 intergenic not near genes chrX 4831694 intergenic not near genes chrX 4835415 intergenic not near genes chrX_19_4830001 chrX_4830001 RAL-849 3989 chrX 4931327 4931359 chrX 4931448 4931503 9 141 45.0 45.0 45.0 0.2 176 chrX 4931327 intron CG44774 - chrX 4931415 intron CG44774 - chrX 4931503 intron CG44774 - chrX_9_4930001 chrX_4930001 RAL-849 3990 chrX 4963082 4963091 chrX 4963215 4963224 6 133 7.0 7.5 7.2 0.7 142 chrX 4963082 intron CR44833 - chrX 4963153 intron CR44833 - chrX 4963224 intron CR44833 - chrX_6_4960001 chrX_4960001 RAL-849 3991 chrX 4990000 4990075 chrX 4997264 4997339 roo 16 7263 3.5 5.0 4.2 3.1 7339 chrX 4990000 intron CR44833 - chrX 4993670 intron CR44833 - chrX 4997339 intron CR44833 - chrX_16_4990001 chrX_4990001 RAL-849 3992 chrX 5057503 5057575 chrX 5057655 5057727 18 151 4.0 4.0 4.0 3.6 224 chrX 5057503 intron,intron CR44833 -,ovo + chrX 5057615 intron,intron CR44833 -,ovo + chrX 5057727 intron,intron CR44833 -,ovo + chrX_18_5055001 chrX_5055001 RAL-849 3993 chrX 5096236 5096298 chrX 5103851 5103913 springer 13 7612 6.0 8.0 7.0 1.6 7677 chrX 5096236 intron,intron CG15465 +,rg + chrX 5100074 intron,intron CG15465 +,rg + chrX 5103913 intron,intron CG15465 +,rg + chrX_13_5100001 chrX_5100001 RAL-849 3994 chrX 5122769 5122851 chrX 5123048 5123129 11 279 4.5 0.0 2.2 3.4 360 chrX 5122769 intron,intron CG15465 +,rg + chrX 5122949 intron,intron CG15465 +,rg + chrX 5123129 intron,intron CG15465 +,rg + chrX_11_5120001 chrX_5120001 RAL-849 3995 chrX 5134790 5134816 chrX 5134941 5134967 6 151 7.5 14.5 11.0 0.5 177 chrX 5134790 intron,intron CG15465 +,rg + chrX 5134878 intron,intron CG15465 +,rg + chrX 5134967 intron,intron CG15465 +,rg + chrX_6_5130001 chrX_5130001 RAL-849 3996 chrX 5220341 5220365 chrX 5220632 5220656 7 291 13.0 6.0 9.5 0.7 315 chrX 5220341 intron,intron CG15465 +,rg + chrX 5220498 intron,intron CG15465 +,rg + chrX 5220656 intron,intron CG15465 +,rg + chrX_7_5220001 chrX_5220001 RAL-849 3997 chrX 5291465 5291724 chrX 5291593 5291850 11 127 8.0 11.0 9.5 1.0 385 chrX 5291465 intergenic not near genes chrX 5291658 intergenic not near genes chrX 5291850 intergenic not near genes chrX_11_5290001 chrX_5290001 RAL-849 3998 chrX 5338659 5338722 chrX 5339962 5340009 jockey 15 1297 6.5 3.0 4.8 2.6 1350 chrX 5338659 intergenic not near genes chrX 5339334 intergenic not near genes chrX 5340009 intergenic SK + chrX_15_5335001 chrX_5335001 RAL-849 3999 chrX 5350254 5350315 chrX 5350413 5350472 18 158 6.5 4.5 5.5 2.8 218 chrX 5350254 intron SK + chrX 5350363 intron SK + chrX 5350472 intron SK + chrX_18_5350001 chrX_5350001 RAL-849 4000 chrX 5424907 5424938 chrX 5425053 5425084 8 146 8.0 8.0 8.0 0.9 177 chrX 5424907 exon CG4165 + chrX 5424996 intron CG4165 + chrX 5425084 intron CG4165 + chrX_8_5420001 chrX_5420001 RAL-849 4001 chrX 5441947 5442013 chrX 5442100 5442171 21 151 4.0 4.5 4.2 4.0 224 chrX 5441947 intergenic not near genes chrX 5442059 intergenic not near genes chrX 5442171 intergenic not near genes chrX_21_5440001 chrX_5440001 RAL-849 4002 chrX 5473548 5473616 chrX 5473674 5473742 15 115 6.5 6.5 6.5 2.0 194 chrX 5473548 intron SPR + chrX 5473645 intron SPR + chrX 5473742 intron SPR + chrX_15_5470001 chrX_5470001 RAL-849 4003 chrX 5481071 5481092 chrX 5485081 5485102 I-element 7 4010 0.0 5.5 2.8 1.8 4031 chrX 5481071 intron SPR + chrX 5483086 intron SPR + chrX 5485102 intron SPR + chrX_7_5480001 chrX_5480001 RAL-849 4004 chrX 5524794 5524868 chrX 5528703 5528792 412 15 3910 2.5 0.5 1.5 6.0 3998 chrX 5524794 intergenic snoRNA:Psi28S-3342 - chrX 5526793 intergenic not near genes chrX 5528792 intergenic Vsx2 - chrX_15_5525001 chrX_5525001 RAL-849 4005 chrX 5544905 5544980 chrX 5545043 5545081 25 129 5.5 5.0 5.2 4.0 176 chrX 5544905 intron Vsx2 - chrX 5544993 intron Vsx2 - chrX 5545081 intron Vsx2 - chrX_25_5545001 chrX_5545001 RAL-849 4006 chrX 5566774 5566786 chrX 5566869 5566917 7 121 6.5 5.5 6.0 1.0 143 chrX 5566774 intergenic not near genes chrX 5566846 intergenic not near genes chrX 5566917 intergenic not near genes chrX_7_5565001 chrX_5565001 RAL-849 4007 chrX 5600921 5600998 chrX 5601071 5601148 19 142 4.5 1.0 2.8 5.0 227 chrX 5600921 intron Vsx1 + chrX 5601034 intron Vsx1 + chrX 5601148 intron Vsx1 + chrX_19_5600001 chrX_5600001 RAL-849 4008 chrX 5727393 5727416 chrX 5732177 5732205 Doc 10 4788 6.5 6.0 6.2 1.4 4812 chrX 5727393 intron CG32758 - chrX 5729799 intron CG32758 - chrX 5732205 intron CG32758 - chrX_10_5725001 chrX_5725001 RAL-849 4009 chrX 5798850 5798873 chrX 5799037 5799076 10 204 0.0 9.0 4.5 1.8 226 chrX 5798850 intergenic not near genes chrX 5798963 intergenic not near genes chrX 5799076 intergenic not near genes chrX_10_5795001 chrX_5795001 RAL-849 4010 chrX 5798874 5798892 chrX 5799027 5799099 8 204 0.0 6.5 3.2 1.9 225 chrX 5798874 intergenic not near genes chrX 5798986 intergenic not near genes chrX 5799099 intergenic not near genes chrX_8_5795001 chrX_5795001 RAL-849 4011 chrX 5825713 5825755 chrX 5825854 5825896 10 141 12.5 6.5 9.5 1.0 183 chrX 5825713 intron CG15765 + chrX 5825804 intron CG15765 + chrX 5825896 intron CG15765 + chrX_10_5825001 chrX_5825001 RAL-849 4012 chrX 5883767 5883834 chrX 5884058 5884125 pogo 19 291 5.5 4.0 4.8 3.3 358 chrX 5883767 intron CR45668 - chrX 5883946 intron CR45668 - chrX 5884125 intron CR45668 - chrX_19_5880001 chrX_5880001 RAL-849 4013 chrX 5884121 5884184 chrX 5884412 5884475 pogo 14 286 4.5 7.5 6.0 2.0 354 chrX 5884121 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884475 intron CR45668 - chrX_14_5880001 chrX_5880001 RAL-849 4014 chrX 6009193 6009272 chrX 6009583 6009662 30 390 6.5 3.0 4.8 5.2 469 chrX 6009193 intron mab-21 - chrX 6009428 intron mab-21 - chrX 6009662 intron mab-21 - chrX_30_6005001 chrX_6005001 RAL-849 4015 chrX 6037510 6037580 chrX 6037740 6037813 15 233 7.0 7.0 7.0 1.9 303 chrX 6037510 intron rux - chrX 6037662 intron rux - chrX 6037813 intergenic rux -,CG5941 + chrX_15_6035001 chrX_6035001 RAL-849 4016 chrX 6118653 6118723 chrX 6118785 6118855 24 131 4.0 11.0 7.5 2.8 202 chrX 6118653 intron Ca-alpha1T - chrX 6118754 intron Ca-alpha1T - chrX 6118855 intron Ca-alpha1T - chrX_24_6115001 chrX_6115001 RAL-849 4017 chrX 6171547 6171601 chrX 6179029 6179084 Quasimodo 13 7480 4.0 6.0 5.0 2.2 7537 chrX 6171547 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179084 intron Ca-alpha1T - chrX_13_6175001 chrX_6175001 RAL-849 4018 chrX 6335219 6335239 chrX 6337779 6337799 Tirant 5 2560 0.0 20.0 10.0 0.5 2580 chrX 6335219 intergenic not near genes chrX 6336509 intergenic not near genes chrX 6337799 5` UTR CG3842 + chrX_5_6335001 chrX_6335001 RAL-849 4019 chrX 6392830 6392901 chrX 6397645 6397667 Doc 17 4812 6.0 9.0 7.5 2.0 4837 chrX 6392830 intergenic not near genes chrX 6395248 intergenic not near genes chrX 6397667 intergenic not near genes chrX_17_6395001 chrX_6395001 RAL-849 4020 chrX 6429962 6429993 chrX 6435479 6435502 Rt1c 11 5515 12.5 11.5 12.0 0.8 5540 chrX 6429962 intron CG42340 - chrX 6432732 intron CG42340 - chrX 6435502 intron CG42340 - chrX_11_6430001 chrX_6430001 RAL-849 4021 chrX 6445267 6445334 chrX 6451075 6451142 297 5 5808 2.5 5.0 3.8 1.0 5875 chrX 6445267 intron CG42340 - chrX 6448204 intron CG42340 - chrX 6451142 intron CG42340 - chrX_5_6445001 chrX_6445001 RAL-849 4022 chrX 6487930 6487981 chrX 6488062 6488113 21 131 9.5 9.0 9.2 2.1 183 chrX 6487930 intron CG42340 - chrX 6488022 intron CG42340 - chrX 6488113 intron CG42340 - chrX_21_6485001 chrX_6485001 RAL-849 4023 chrX 6562775 6562846 chrX 6571307 6571372 Tirant 34 8529 7.0 10.5 8.8 3.5 8597 chrX 6562775 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571372 intron CG34417 + chrX_34_6565001 chrX_6565001 RAL-849 4024 chrX 6605448 6605494 chrX 6608520 6608566 Burdock 16 3071 5.0 8.5 6.8 2.1 3118 chrX 6605448 intron pigs + chrX 6607007 intron pigs + chrX 6608566 intron pigs + chrX_16_6605001 chrX_6605001 RAL-849 4025 chrX 6629735 6629793 chrX 6629872 6629930 14 137 4.5 4.0 4.2 2.7 195 chrX 6629735 intron pigs + chrX 6629832 intron pigs + chrX 6629930 intron pigs + chrX_14_6625001 chrX_6625001 RAL-849 4026 chrX 6729188 6729252 chrX 6731049 6731102 15 1855 61.0 53.5 57.2 0.3 1914 chrX 6729188 intron CG3168 - chrX 6730145 intron CG3168 - chrX 6731102 intron CG3168 - chrX_15_6730001 chrX_6730001 RAL-849 4027 chrX 6733394 6733665 chrX 6733533 6733796 20 130 9.5 9.0 9.2 2.0 402 chrX 6733394 intron,intron CG3168 -,CR43461 + chrX 6733595 intron,intron CG3168 -,CR43461 + chrX 6733796 intron,intron CG3168 -,CR43461 + chrX_20_6730001 chrX_6730001 RAL-849 4028 chrX 6751465 6751517 chrX 6751602 6751660 13 140 1.0 1.0 1.0 6.5 195 chrX 6751465 intron CG14439 + chrX 6751562 intron CG14439 + chrX 6751660 intron CG14439 + chrX_13_6750001 chrX_6750001 RAL-849 4029 chrX 6814235 6814301 chrX 6814363 6814428 9 128 3.5 3.5 3.5 2.0 193 chrX 6814235 exon iav + chrX 6814332 intron iav + chrX 6814428 intron iav + chrX_9_6810001 chrX_6810001 RAL-849 4030 chrX 6865739 6865797 chrX 6865870 6865925 21 131 11.5 7.5 9.5 2.0 186 chrX 6865739 intron CG14434 - chrX 6865832 intron CG14434 - chrX 6865925 intron CG14434 - chrX_21_6865001 chrX_6865001 RAL-849 4031 chrX 6895842 6895862 chrX 6896195 6896215 11 353 10.0 5.5 7.8 1.2 373 chrX 6895842 intergenic not near genes chrX 6896028 intergenic not near genes chrX 6896215 intergenic not near genes chrX_11_6895001 chrX_6895001 RAL-849 4032 chrX 6897651 6897706 chrX 6897801 6897858 17 158 0.0 5.5 2.8 4.5 207 chrX 6897651 intergenic not near genes chrX 6897754 intergenic not near genes chrX 6897858 intergenic not near genes chrX_17_6895001 chrX_6895001 RAL-849 4033 chrX 6901329 6901377 chrX 6901455 6901503 15 124 5.0 4.0 4.5 2.7 174 chrX 6901329 intergenic not near genes chrX 6901416 intergenic not near genes chrX 6901503 intergenic not near genes chrX_15_6900001 chrX_6900001 RAL-849 4034 chrX 6989471 6989531 chrX 6989608 6989662 18 137 5.5 7.0 6.2 2.5 191 chrX 6989471 intron ogre - chrX 6989566 intron ogre - chrX 6989662 intron ogre - chrX_18_6985001 chrX_6985001 RAL-849 4035 chrX 7023561 7023616 chrX 7030996 7031056 Tabor 17 7438 7.0 7.0 7.0 2.1 7495 chrX 7023561 intron CG12541 - chrX 7027308 intron CG12541 - chrX 7031056 intron CG12541 - chrX_17_7025001 chrX_7025001 RAL-849 4036 chrX 7125220 7125264 chrX 7134424 7134473 roo 9 9208 1.0 9.5 5.2 1.5 9253 chrX 7125220 intergenic not near genes chrX 7129846 intergenic not near genes chrX 7134473 intergenic not near genes chrX_9_7125001 chrX_7125001 RAL-849 4037 chrX 7294488 7294499 chrX 7294616 7294647 6 144 14.5 8.5 11.5 0.5 159 chrX 7294488 intron,intron CR44357 -,CG1677 - chrX 7294568 intron,intron CR44357 -,CG1677 - chrX 7294647 intron,intron CR44357 -,CG1677 - chrX_6_7290001 chrX_7290001 RAL-849 4038 chrX 7294500 7294519 chrX 7294612 7294661 8 135 12.5 8.0 10.2 0.7 161 chrX 7294500 intron,intron CR44357 -,CG1677 - chrX 7294580 intron,intron CR44357 -,CG1677 - chrX 7294661 intron,intron CR44357 -,CG1677 - chrX_8_7290001 chrX_7290001 RAL-849 4039 chrX 7381120 7381174 chrX 7381253 7381307 8 133 3.5 8.0 5.8 1.2 187 chrX 7381120 intron,intron CR44357 -,CG1677 - chrX 7381214 intron,intron CR44357 -,CG1677 - chrX 7381307 intron,intron CR44357 -,CG1677 - chrX_8_7380001 chrX_7380001 RAL-849 4040 chrX 7470178 7470221 chrX 7470316 7470359 10 138 4.5 5.5 5.0 1.7 181 chrX 7470178 intergenic not near genes chrX 7470268 intergenic not near genes chrX 7470359 intergenic not near genes chrX_10_7470001 chrX_7470001 RAL-849 4041 chrX 7480784 7480804 chrX 7482345 7482364 jockey 4 1562 2.5 19.0 10.8 0.3 1580 chrX 7480784 intergenic not near genes chrX 7481574 intergenic not near genes chrX 7482364 intergenic not near genes chrX_4_7480001 chrX_7480001 RAL-849 4042 chrX 7570587 7570662 chrX 7570771 7570846 17 183 3.5 5.0 4.2 3.3 259 chrX 7570587 intergenic not near genes chrX 7570716 intergenic not near genes chrX 7570846 intergenic not near genes chrX_17_7570001 chrX_7570001 RAL-849 4043 chrX 7702450 7702526 chrX 7702604 7702652 20 146 0.0 5.0 2.5 5.7 202 chrX 7702450 intron CHES-1-like - chrX 7702551 intron CHES-1-like - chrX 7702652 intron CHES-1-like - chrX_20_7700001 chrX_7700001 RAL-849 4044 chrX 7702870 7702919 chrX 7703359 7703408 jockey 25 489 9.0 7.0 8.0 2.8 538 chrX 7702870 intron CHES-1-like - chrX 7703139 intron CHES-1-like - chrX 7703408 intron CHES-1-like - chrX_25_7700001 chrX_7700001 RAL-849 4045 chrX 7720517 7720573 chrX 7720638 7720705 10 127 3.5 0.5 2.0 3.3 188 chrX 7720517 intergenic not near genes chrX 7720611 intergenic not near genes chrX 7720705 intergenic not near genes chrX_10_7720001 chrX_7720001 RAL-849 4046 chrX 7737082 7737146 chrX 7737244 7737308 11 160 3.0 4.0 3.5 2.4 226 chrX 7737082 5` UTR Tom40 + chrX 7737195 intron Tom40 + chrX 7737308 intron Tom40 + chrX_11_7735001 chrX_7735001 RAL-849 4047 chrX 7845388 7845463 chrX 7845544 7845618 20 155 7.5 2.0 4.8 3.4 230 chrX 7845388 intergenic not near genes chrX 7845503 intergenic not near genes chrX 7845618 intergenic not near genes chrX_20_7845001 chrX_7845001 RAL-849 4048 chrX 7845681 7845750 chrX 7847222 7847285 hopper2 14 1540 3.5 5.0 4.2 2.7 1604 chrX 7845681 intergenic not near genes chrX 7846483 intergenic not near genes chrX 7847285 intergenic not near genes chrX_14_7845001 chrX_7845001 RAL-849 4049 chrX 7999426 7999439 chrX 7999543 7999566 4 122 11.5 12.5 12.0 0.3 140 chrX 7999426 exon Tbh + chrX 7999496 exon Tbh + chrX 7999566 exon Tbh + chrX_4_7995001 chrX_7995001 RAL-849 4050 chrX 7999443 7999469 chrX 7999542 7999576 12 115 7.5 12.5 10.0 1.1 133 chrX 7999443 exon Tbh + chrX 7999510 exon Tbh + chrX 7999576 exon Tbh + chrX_12_7995001 chrX_7995001 RAL-849 4051 chrX 8024612 8024665 chrX 8024738 8024757 4 116 11.5 4.5 8.0 0.4 145 chrX 8024612 intron Tbh + chrX 8024684 intron Tbh + chrX 8024757 intron Tbh + chrX_4_8020001 chrX_8020001 RAL-849 4052 chrX 8031401 8031450 chrX 8035760 8035809 Juan 18 4358 2.5 8.0 5.2 2.9 4408 chrX 8031401 intergenic not near genes chrX 8033605 intergenic not near genes chrX 8035809 3` UTR CG2233 - chrX_18_8030001 chrX_8030001 RAL-849 4053 chrX 8038861 8038890 chrX 8038993 8039022 9 132 4.5 0.5 2.5 2.6 161 chrX 8038861 3` UTR fs(1)h - chrX 8038942 3` UTR fs(1)h - chrX 8039022 3` UTR fs(1)h - chrX_9_8035001 chrX_8035001 RAL-849 4054 chrX 8083509 8083526 chrX 8083636 8083653 8 127 10.0 18.0 14.0 0.5 144 chrX 8083509 intergenic not near genes chrX 8083581 intergenic CG2256 - chrX 8083653 intergenic CG2256 - chrX_8_8080001 chrX_8080001 RAL-849 4055 chrX 8085525 8085600 chrX 8085661 8085736 23 136 3.5 5.0 4.2 4.4 211 chrX 8085525 intron,5` UTR CG2256 -,CR45535 + chrX 8085630 intron,5` UTR CG2256 -,CR45535 + chrX 8085736 intron,5` UTR CG2256 -,CR45535 + chrX_23_8085001 chrX_8085001 RAL-849 4056 chrX 8092253 8092315 chrX 8092388 8092450 16 135 2.5 5.0 3.8 3.3 197 chrX 8092253 intron Ubc-E2H - chrX 8092352 intron Ubc-E2H - chrX 8092450 intron Ubc-E2H - chrX_16_8090001 chrX_8090001 RAL-849 4057 chrX 8138697 8138762 chrX 8138992 8139057 28 295 4.5 8.0 6.2 3.9 360 chrX 8138697 3` UTR Smox - chrX 8138877 3` UTR Smox - chrX 8139057 3` UTR Smox - chrX_28_8135001 chrX_8135001 RAL-849 4058 chrX 8159642 8159707 chrX 8159764 8159819 10 126 6.0 5.5 5.8 1.5 177 chrX 8159642 intergenic GIIIspla2 +,CG15337 + chrX 8159730 intergenic CG15337 +,GIIIspla2 + chrX 8159819 intergenic CG15337 +,GIIIspla2 + chrX_10_8155001 chrX_8155001 RAL-849 4059 chrX 8364800 8364866 chrX 8365247 8365313 BS 13 447 8.0 10.0 9.0 1.3 513 chrX 8364800 intron nAChRalpha3 - chrX 8365056 intron nAChRalpha3 - chrX 8365313 intron nAChRalpha3 - chrX_13_8365001 chrX_8365001 RAL-849 4060 chrX 8371108 8371181 chrX 8371314 8371359 6 190 4.5 4.0 4.2 1.2 251 chrX 8371108 intergenic not near genes chrX 8371234 intergenic not near genes chrX 8371359 intergenic not near genes chrX_6_8370001 chrX_8370001 RAL-849 4061 chrX 8500894 8500916 chrX 8501108 8501130 5 214 11.0 0.0 5.5 0.8 236 chrX 8500894 intron CG33181 + chrX 8501012 intron CG33181 + chrX 8501130 intron CG33181 + chrX_5_8500001 chrX_8500001 RAL-849 4062 chrX 8500942 8500960 chrX 8501096 8501175 7 206 5.5 0.0 2.8 1.8 233 chrX 8500942 intron CG33181 + chrX 8501058 intron CG33181 + chrX 8501175 intron CG33181 + chrX_7_8500001 chrX_8500001 RAL-849 4063 chrX 8509069 8509120 chrX 8509196 8509247 16 127 0.0 2.5 1.2 7.3 178 chrX 8509069 intron CG33181 + chrX 8509158 intron CG33181 + chrX 8509247 intron CG33181 + chrX_16_8505001 chrX_8505001 RAL-849 4064 chrX 8543561 8543572 chrX 8543690 8543701 6 129 15.5 6.0 10.8 0.5 140 chrX 8543561 intron Nrg + chrX 8543631 intron Nrg + chrX 8543701 intron Nrg + chrX_6_8540001 chrX_8540001 RAL-849 4065 chrX 8543577 8543617 chrX 8543666 8543746 16 126 6.0 3.0 4.5 2.9 169 chrX 8543577 intron Nrg + chrX 8543662 intron Nrg + chrX 8543746 intron Nrg + chrX_16_8540001 chrX_8540001 RAL-849 4066 chrX 8605276 8605339 chrX 8605403 8605453 23 124 7.5 6.0 6.8 2.9 177 chrX 8605276 exon Caf1-180 - chrX 8605364 exon Caf1-180 - chrX 8605453 exon Caf1-180 - chrX_23_8605001 chrX_8605001 RAL-849 4067 chrX 8606491 8606525 chrX 8606617 8606651 9 125 12.5 14.5 13.5 0.6 160 chrX 8606491 intergenic Caf1-180 - chrX 8606571 intergenic Caf1-180 - chrX 8606651 intergenic Caf1-180 - chrX_9_8605001 chrX_8605001 RAL-849 4068 chrX 8727360 8727420 chrX 8727487 8727547 5 127 3.5 1.5 2.5 1.4 187 chrX 8727360 intergenic not near genes chrX 8727454 intergenic not near genes chrX 8727547 intergenic not near genes chrX_5_8725001 chrX_8725001 RAL-849 4069 chrX 8747975 8748026 chrX 8748102 8748133 19 128 9.0 9.0 9.0 1.9 158 chrX 8747975 intergenic not near genes chrX 8748054 intergenic not near genes chrX 8748133 intergenic not near genes chrX_19_8745001 chrX_8745001 RAL-849 4070 chrX 8772202 8772247 chrX 8772331 8772376 13 125 6.0 8.5 7.2 1.6 174 chrX 8772202 intron Lim1 - chrX 8772289 intron Lim1 - chrX 8772376 intron Lim1 - chrX_13_8770001 chrX_8770001 RAL-849 4071 chrX 8832234 8832280 chrX 8832352 8832406 5 124 3.0 4.0 3.5 1.1 172 chrX 8832234 intergenic not near genes chrX 8832320 intergenic not near genes chrX 8832406 intergenic not near genes chrX_5_8830001 chrX_8830001 RAL-849 4072 chrX 8908771 8908787 chrX 8908917 8908935 5 148 8.0 4.5 6.2 0.7 164 chrX 8908771 intron rdgA + chrX 8908853 intron rdgA + chrX 8908935 intron rdgA + chrX_5_8905001 chrX_8905001 RAL-849 4073 chrX 8913485 8913532 chrX 8913644 8913691 8 155 2.5 2.5 2.5 2.3 206 chrX 8913485 intron rdgA + chrX 8913588 intron rdgA + chrX 8913691 intron rdgA + chrX_8_8910001 chrX_8910001 RAL-849 4074 chrX 8922284 8922354 chrX 8922768 8922838 jockey 25 483 9.0 6.0 7.5 2.9 554 chrX 8922284 intron rdgA + chrX 8922561 intron rdgA + chrX 8922838 intron rdgA + chrX_25_8920001 chrX_8920001 RAL-849 4075 chrX 8948718 8948722 chrX 8956278 8956282 roo 4 7560 12.0 4.5 8.2 0.4 7564 chrX 8948718 intron rdgA + chrX 8952500 intron rdgA + chrX 8956282 intron rdgA + chrX_4_8950001 chrX_8950001 RAL-849 4076 chrX 8948727 8948788 chrX 8956276 8956338 roo 18 7559 5.5 4.5 5.0 3.0 7611 chrX 8948727 intron rdgA + chrX 8952532 intron rdgA + chrX 8956338 intron rdgA + chrX_18_8950001 chrX_8950001 RAL-849 4077 chrX 8968830 8968857 chrX 8968957 8968984 12 126 11.5 14.5 13.0 0.9 154 chrX 8968830 intron rdgA + chrX 8968907 intron rdgA + chrX 8968984 intron rdgA + chrX_12_8965001 chrX_8965001 RAL-849 4078 chrX 9041953 9041967 chrX 9042110 9042124 7 157 0.0 6.5 3.2 1.7 171 chrX 9041953 intron,intron CR43836 -,CG42388 + chrX 9042038 intron,intron CR43836 -,CG42388 + chrX 9042124 intron,intron CR43836 -,CG42388 + chrX_7_9040001 chrX_9040001 RAL-849 4079 chrX 9058903 9058958 chrX 9059030 9059065 14 120 6.0 6.5 6.2 1.9 162 chrX 9058903 intron CG15365 - chrX 9058984 intron CG15365 - chrX 9059065 intron CG15365 - chrX_14_9055001 chrX_9055001 RAL-849 4080 chrX 9190751 9190783 chrX 9190888 9190926 5 138 7.5 8.0 7.8 0.6 175 chrX 9190751 intergenic CG12115 - chrX 9190838 intergenic CG12115 - chrX 9190926 intergenic CG12115 - chrX_5_9190001 chrX_9190001 RAL-849 4081 chrX 9289664 9289708 chrX 9289797 9289841 9 133 5.5 11.0 8.2 1.0 177 chrX 9289664 intron lz + chrX 9289752 intron lz + chrX 9289841 intron lz + chrX_9_9285001 chrX_9285001 RAL-849 4082 chrX 9308581 9308830 chrX 9308708 9308939 20 130 8.5 6.0 7.2 2.4 358 chrX 9308581 intergenic not near genes chrX 9308760 intergenic not near genes chrX 9308939 intergenic not near genes chrX_20_9305001 chrX_9305001 RAL-849 4083 chrX 9439395 9439422 chrX 9439512 9439549 19 125 9.5 9.0 9.2 1.9 154 chrX 9439395 intron mgl - chrX 9439472 intron mgl - chrX 9439549 intron mgl - chrX_19_9435001 chrX_9435001 RAL-849 4084 chrX 9439426 9439445 chrX 9439508 9439571 12 116 6.0 8.0 7.0 1.5 145 chrX 9439426 intron mgl - chrX 9439498 intron mgl - chrX 9439571 intron mgl - chrX_12_9435001 chrX_9435001 RAL-849 4085 chrX 9503211 9503211 chrX 22383085 22383375 11 12880058 22.0 161.5 91.8 0.1 12880164 chrX 9503211 3` UTR CG32700 - chrX 15943293 intron CG8924 + chrX 22383375 intergenic not near genes chrX_11_15940001 chrX_15940001 RAL-849 4086 chrX 9508097 9508159 chrX 9509665 9509727 jockey 23 1567 8.5 9.0 8.8 2.3 1630 chrX 9508097 intron CG32700 - chrX 9508912 intron CG32700 - chrX 9509727 intron CG32700 - chrX_23_9505001 chrX_9505001 RAL-849 4087 chrX 9543348 9543421 chrX 9543477 9543548 29 128 6.5 6.5 6.5 3.9 200 chrX 9543348 intron CG32700 - chrX 9543448 intron CG32700 - chrX 9543548 intron CG32700 - chrX_29_9540001 chrX_9540001 RAL-849 4088 chrX 9575744 9575817 chrX 9576118 9576191 mdg3 27 369 6.5 6.0 6.2 3.8 447 chrX 9575744 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576191 intron,5` UTR CG32699 -,CG42395 - chrX_27_9575001 chrX_9575001 RAL-849 4089 chrX 9576990 9577064 chrX 9577490 9577564 22 500 6.0 5.5 5.8 3.2 574 chrX 9576990 intron CG32699 - chrX 9577277 intron CG32699 - chrX 9577564 intron CG32699 - chrX_22_9575001 chrX_9575001 RAL-849 4090 chrX 9618183 9618248 chrX 9618311 9618376 21 128 5.0 4.0 4.5 3.8 193 chrX 9618183 intron CG42797 + chrX 9618280 intron CG42797 + chrX 9618376 intron CG42797 + chrX_21_9615001 chrX_9615001 RAL-849 4091 chrX 9633306 9633379 chrX 9633432 9633474 11 126 0.5 4.5 2.5 3.1 168 chrX 9633306 intron l(1)G0232 - chrX 9633390 intron l(1)G0232 - chrX 9633474 intron l(1)G0232 - chrX_11_9630001 chrX_9630001 RAL-849 4092 chrX 9791817 9791887 chrX 9791966 9792029 15 145 3.5 4.0 3.8 3.1 212 chrX 9791817 intron CG32698 + chrX 9791923 intron CG32698 + chrX 9792029 intron CG32698 + chrX_15_9790001 chrX_9790001 RAL-849 4093 chrX 9838435 9838462 chrX 9839454 9839481 5 1019 12.0 10.0 11.0 0.4 1046 chrX 9838435 intron CG32698 + chrX 9838958 intron CG32698 + chrX 9839481 intron CG32698 + chrX_5_9835001 chrX_9835001 RAL-849 4094 chrX 9839306 9839325 chrX 9839433 9839458 6 129 4.5 5.5 5.0 1.0 152 chrX 9839306 intron CG32698 + chrX 9839382 intron CG32698 + chrX 9839458 intron CG32698 + chrX_6_9835001 chrX_9835001 RAL-849 4095 chrX 9925487 9925533 chrX 9925619 9925665 23 131 12.0 9.0 10.5 2.0 178 chrX 9925487 intergenic not near genes chrX 9925576 intergenic not near genes chrX 9925665 intergenic not near genes chrX_23_9925001 chrX_9925001 RAL-849 4096 chrX 9988860 9988938 chrX 9989050 9989128 17 189 2.5 3.0 2.8 4.5 268 chrX 9988860 intergenic not near genes chrX 9988994 intergenic not near genes chrX 9989128 intergenic not near genes chrX_17_9985001 chrX_9985001 RAL-849 4097 chrX 10133584 10133616 chrX 10133721 10133753 8 136 9.5 5.5 7.5 0.9 169 chrX 10133584 intron,intron RhoU +,CR44894 - chrX 10133668 intron,intron RhoU +,CR44894 - chrX 10133753 intron,intron RhoU +,CR44894 - chrX_8_10130001 chrX_10130001 RAL-849 4098 chrX 10138178 10138235 chrX 10145732 10145789 412 20 7554 7.5 6.5 7.0 2.5 7611 chrX 10138178 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145789 intron,intron RhoU +,CR44894 - chrX_20_10140001 chrX_10140001 RAL-849 4099 chrX 10152622 10152673 chrX 10152736 10152802 10 125 2.0 5.5 3.8 2.1 180 chrX 10152622 intron CR44894 - chrX 10152712 intron CR44894 - chrX 10152802 intron CR44894 - chrX_10_10150001 chrX_10150001 RAL-849 4100 chrX 10216797 10216849 chrX 10216928 10216980 18 130 10.0 8.0 9.0 1.8 183 chrX 10216797 3` UTR l(1)G0230 + chrX 10216888 3` UTR l(1)G0230 + chrX 10216980 3` UTR l(1)G0230 + chrX_18_10215001 chrX_10215001 RAL-849 4101 chrX 10233116 10233163 chrX 10233247 10233294 9 131 7.0 7.0 7.0 1.1 178 chrX 10233116 intergenic Ipod - chrX 10233205 intergenic Ipod - chrX 10233294 intergenic Ipod - chrX_9_10230001 chrX_10230001 RAL-849 4102 chrX 10296388 10296405 chrX 10296509 10296538 6 122 13.5 15.5 14.5 0.4 150 chrX 10296388 intron alpha-Man-I - chrX 10296463 intron alpha-Man-I - chrX 10296538 intron alpha-Man-I - chrX_6_10295001 chrX_10295001 RAL-849 4103 chrX 10306018 10306040 chrX 10306149 10306171 4 131 12.0 0.0 6.0 0.6 153 chrX 10306018 intron alpha-Man-I - chrX 10306094 intron alpha-Man-I - chrX 10306171 intron alpha-Man-I - chrX_4_10305001 chrX_10305001 RAL-849 4104 chrX 10317505 10317577 chrX 10317634 10317705 12 128 2.5 4.5 3.5 2.7 200 chrX 10317505 intron alpha-Man-I - chrX 10317605 intron alpha-Man-I - chrX 10317705 intron alpha-Man-I - chrX_12_10315001 chrX_10315001 RAL-849 4105 chrX 10348763 10348815 chrX 10356378 10356430 springer 9 7615 6.5 6.0 6.2 1.2 7667 chrX 10348763 intergenic snoRNA:U3:9B + chrX 10352596 intergenic not near genes chrX 10356430 intergenic l(1)G0289 - chrX_9_10350001 chrX_10350001 RAL-849 4106 chrX 10369060 10369125 chrX 10369277 10369337 18 215 7.0 6.0 6.5 2.4 277 chrX 10369060 intron CG17841 + chrX 10369198 intron CG17841 + chrX 10369337 intron CG17841 + chrX_18_10365001 chrX_10365001 RAL-849 4107 chrX 10453031 10453092 chrX 10453272 10453333 13 241 3.0 6.0 4.5 2.4 302 chrX 10453031 intron CG32683 - chrX 10453182 intron CG32683 - chrX 10453333 intron CG32683 - chrX_13_10450001 chrX_10450001 RAL-849 4108 chrX 10500156 10500190 chrX 10500292 10500325 12 136 10.5 0.0 5.2 1.9 169 chrX 10500156 intron spri - chrX 10500240 intron spri - chrX 10500325 intron spri - chrX_12_10500001 chrX_10500001 RAL-849 4109 chrX 10550286 10550353 chrX 10550414 10550481 22 127 4.5 6.0 5.2 3.5 195 chrX 10550286 intron spri - chrX 10550384 intron spri - chrX 10550481 intron spri - chrX_22_10550001 chrX_10550001 RAL-849 4110 chrX 10550824 10550874 chrX 10552325 10552391 hobo 21 1511 10.5 6.0 8.2 2.3 1567 chrX 10550824 intron spri - chrX 10551608 intron spri - chrX 10552391 intron spri - chrX_21_10550001 chrX_10550001 RAL-849 4111 chrX 10612126 10612176 chrX 10612563 10612613 5 435 23.0 23.5 23.2 0.2 487 chrX 10612126 exon CG43347 - chrX 10612370 exon CG43347 - chrX 10612613 intron CG43347 - chrX_5_10610001 chrX_10610001 RAL-849 4112 chrX 10666405 10666470 chrX 10666622 10666687 29 217 6.0 6.5 6.2 4.0 282 chrX 10666405 intron X11Lbeta + chrX 10666546 intron X11Lbeta + chrX 10666687 intron X11Lbeta + chrX_29_10665001 chrX_10665001 RAL-849 4113 chrX 10686010 10686070 chrX 10691197 10691257 roo 28 5187 7.0 8.0 7.5 3.3 5247 chrX 10686010 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691257 intron X11Lbeta + chrX_28_10685001 chrX_10685001 RAL-849 4114 chrX 10772632 10772685 chrX 10772765 10772818 Tirant 13 128 3.5 4.5 4.0 2.6 186 chrX 10772632 intron CG15211 + chrX 10772725 intron CG15211 + chrX 10772818 intron CG15211 + chrX_13_10770001 chrX_10770001 RAL-849 4115 chrX 10802989 10803048 chrX 10803122 10803183 23 134 10.5 8.5 9.5 2.2 194 chrX 10802989 intron Imp - chrX 10803086 intron Imp - chrX 10803183 intron Imp - chrX_23_10800001 chrX_10800001 RAL-849 4116 chrX 10876576 10876648 chrX 10876704 10876776 6 126 5.0 3.5 4.2 1.2 200 chrX 10876576 intron CG1637 - chrX 10876676 intron CG1637 - chrX 10876776 intron CG1637 - chrX_6_10875001 chrX_10875001 RAL-849 4117 chrX 11016248 11016271 chrX 11016440 11016463 6 192 4.0 2.0 3.0 1.5 215 chrX 11016248 intron CG42339 - chrX 11016356 intron CG42339 - chrX 11016463 intron CG42339 - chrX_6_11015001 chrX_11015001 RAL-849 4118 chrX 11095953 11096020 chrX 11103105 11103172 HMS-Beagle 20 7152 7.5 10.0 8.8 2.0 7219 chrX 11095953 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103172 intron CG42249 + chrX_20_11095001 chrX_11095001 RAL-849 4119 chrX 11184228 11184265 chrX 11189354 11189391 flea 4 5126 8.0 8.5 8.2 0.4 5163 chrX 11184228 intergenic not near genes chrX 11186810 intergenic not near genes chrX 11189391 intergenic not near genes chrX_4_11185001 chrX_11185001 RAL-849 4120 chrX 11312021 11312080 chrX 11319424 11319483 Stalker2 8 7399 5.5 4.0 4.8 1.4 7462 chrX 11312021 intergenic not near genes chrX 11315752 intergenic not near genes chrX 11319483 intergenic not near genes chrX_8_11315001 chrX_11315001 RAL-849 4121 chrX 11461845 11461875 chrX 11462280 11462310 11 435 4.0 7.0 5.5 1.7 465 chrX 11461845 intron CG43155 + chrX 11462078 intron CG43155 + chrX 11462310 intron CG43155 + chrX_11_11460001 chrX_11460001 RAL-849 4122 chrX 11534997 11535045 chrX 11541517 11541565 Burdock 16 6520 10.5 8.5 9.5 1.5 6568 chrX 11534997 intron Drak + chrX 11538281 intron Drak + chrX 11541565 intron Drak + chrX_16_11535001 chrX_11535001 RAL-849 4123 chrX 11554874 11554935 chrX 11555240 11555301 7 366 10.5 29.0 19.8 0.3 427 chrX 11554874 3` UTR Drak + chrX 11555088 3` UTR CG1572 - chrX 11555301 3` UTR CG1572 - chrX_7_11555001 chrX_11555001 RAL-849 4124 chrX 11558247 11558254 chrX 11558369 11558388 5 132 12.0 0.0 6.0 0.7 141 chrX 11558247 intron CG1572 - chrX 11558318 intron CG1572 - chrX 11558388 intron CG1572 - chrX_5_11555001 chrX_11555001 RAL-849 4125 chrX 11633371 11633441 chrX 11640475 11640545 297 30 7104 9.0 10.5 9.8 2.8 7174 chrX 11633371 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640545 intron Ptp10D + chrX_30_11635001 chrX_11635001 RAL-849 4126 chrX 11645070 11645123 chrX 11648290 11648343 NOF 8 3220 3.0 3.5 3.2 1.9 3273 chrX 11645070 intron Ptp10D + chrX 11646706 intron Ptp10D + chrX 11648343 intron Ptp10D + chrX_8_11645001 chrX_11645001 RAL-849 4127 chrX 11761957 11762000 chrX 11762086 11762129 11 127 5.0 7.5 6.2 1.5 172 chrX 11761957 intron m + chrX 11762043 intron m + chrX 11762129 intron m + chrX_11_11760001 chrX_11760001 RAL-849 4128 chrX 11798984 11799024 chrX 11799120 11799160 11 136 7.0 5.5 6.2 1.5 176 chrX 11798984 intron CkIIbeta + chrX 11799072 intron CkIIbeta + chrX 11799160 intron CkIIbeta + chrX_11_11795001 chrX_11795001 RAL-849 4129 chrX 11804632 11804685 chrX 11804786 11804839 16 154 4.0 6.5 5.2 2.6 207 chrX 11804632 intron Hsc70-3 - chrX 11804736 intron Hsc70-3 - chrX 11804839 intron Hsc70-3 - chrX_16_11800001 chrX_11800001 RAL-849 4130 chrX 12094019 12094050 chrX 12094161 12094191 15 140 5.5 9.0 7.2 1.8 172 chrX 12094019 intron,intron CR43960 +,Ten-a + chrX 12094105 intron,intron CR43960 +,Ten-a + chrX 12094191 intron,intron CR43960 +,Ten-a + chrX_15_12090001 chrX_12090001 RAL-849 4131 chrX 12109646 12109726 chrX 12109785 12109853 26 137 4.5 9.0 6.8 3.3 207 chrX 12109646 intron,intron,exon CR43960 +,Ten-a +,CG2750 + chrX 12109750 intron,intron,exon CR43960 +,Ten-a +,CG2750 + chrX 12109853 intron,intron,exon CR43960 +,Ten-a +,CG2750 + chrX_26_12105001 chrX_12105001 RAL-849 4132 chrX 12161349 12161354 chrX 12161481 12161486 4 132 3.5 7.0 5.2 0.6 137 chrX 12161349 intron Ten-a + chrX 12161418 intron Ten-a + chrX 12161486 intron Ten-a + chrX_4_12160001 chrX_12160001 RAL-849 4133 chrX 12191547 12191578 chrX 12191685 12191716 10 138 2.5 9.0 5.8 1.5 169 chrX 12191547 intron Ten-a + chrX 12191632 intron Ten-a + chrX 12191716 intron Ten-a + chrX_10_12190001 chrX_12190001 RAL-849 4134 chrX 12202732 12202749 chrX 12202866 12202883 4 134 10.0 6.0 8.0 0.4 151 chrX 12202732 intron Ten-a + chrX 12202808 intron Ten-a + chrX 12202883 intron Ten-a + chrX_4_12200001 chrX_12200001 RAL-849 4135 chrX 12245639 12245719 chrX 12245771 12245846 21 128 3.5 2.5 3.0 5.2 207 chrX 12245639 intron Ten-a + chrX 12245742 intron Ten-a + chrX 12245846 intron Ten-a + chrX_21_12245001 chrX_12245001 RAL-849 4136 chrX 12246940 12246964 chrX 12247078 12247102 9 135 6.0 1.5 3.8 1.9 162 chrX 12246940 intron Ten-a + chrX 12247021 intron Ten-a + chrX 12247102 intron Ten-a + chrX_9_12245001 chrX_12245001 RAL-849 4137 chrX 12272799 12272867 chrX 12272928 12272996 16 129 4.5 4.5 4.5 2.9 197 chrX 12272799 intron Ten-a + chrX 12272898 intron Ten-a + chrX 12272996 intron Ten-a + chrX_16_12270001 chrX_12270001 RAL-849 4138 chrX 12295274 12295329 chrX 12295400 12295455 20 125 6.0 5.0 5.5 3.1 181 chrX 12295274 exon Ten-a + chrX 12295364 intron Ten-a + chrX 12295455 intron Ten-a + chrX_20_12295001 chrX_12295001 RAL-849 4139 chrX 12301919 12301985 chrX 12303275 12303289 X-element 5 1340 3.5 0.0 1.8 1.8 1370 chrX 12301919 intron Ten-a + chrX 12302604 intron Ten-a + chrX 12303289 intron Ten-a + chrX_5_12300001 chrX_12300001 RAL-849 4140 chrX 12339265 12339321 chrX 12341411 12341462 8 2142 42.0 36.0 39.0 0.2 2197 chrX 12339265 intergenic not near genes chrX 12340364 intergenic not near genes chrX 12341462 intergenic not near genes chrX_8_12340001 chrX_12340001 RAL-849 4141 chrX 12356864 12356871 chrX 12357006 12357021 5 156 3.0 12.0 7.5 0.6 157 chrX 12356864 intergenic not near genes chrX 12356942 intergenic not near genes chrX 12357021 intergenic not near genes chrX_5_12355001 chrX_12355001 RAL-849 4142 chrX 12375441 12375504 chrX 12375589 12375652 26 147 9.5 4.5 7.0 3.2 211 chrX 12375441 intergenic Ir11a - chrX 12375546 intergenic Ir11a - chrX 12375652 exon Ir11a - chrX_26_12375001 chrX_12375001 RAL-849 4143 chrX 12381836 12381896 chrX 12385788 12385807 flea 7 3935 3.0 6.0 4.5 1.3 3971 chrX 12381836 intergenic not near genes chrX 12383822 intergenic not near genes chrX 12385807 intergenic not near genes chrX_7_12380001 chrX_12380001 RAL-849 4144 chrX 12392751 12392800 chrX 12392882 12392931 14 127 10.0 7.5 8.8 1.4 180 chrX 12392751 intergenic not near genes chrX 12392841 intergenic not near genes chrX 12392931 intergenic not near genes chrX_14_12390001 chrX_12390001 RAL-849 4145 chrX 12392801 12392822 chrX 12392881 12392953 6 122 5.0 7.5 6.2 0.8 152 chrX 12392801 intergenic not near genes chrX 12392877 intergenic not near genes chrX 12392953 intergenic not near genes chrX_6_12390001 chrX_12390001 RAL-849 4146 chrX 12465425 12465497 chrX 12465551 12465623 21 125 4.0 0.0 2.0 7.0 198 chrX 12465425 exon CG42258 + chrX 12465524 intron CG42258 + chrX 12465623 intron CG42258 + chrX_21_12465001 chrX_12465001 RAL-849 4147 chrX 12511275 12511350 chrX 12511407 12511484 7 133 0.0 5.0 2.5 2.0 209 chrX 12511275 intron CG2556 + chrX 12511380 intron CG2556 + chrX 12511484 intron CG2556 + chrX_7_12510001 chrX_12510001 RAL-849 4148 chrX 12635401 12635427 chrX 12635536 12635562 5 135 4.5 8.0 6.2 0.7 161 chrX 12635401 intron Tomosyn + chrX 12635482 intron Tomosyn + chrX 12635562 intron Tomosyn + chrX_5_12635001 chrX_12635001 RAL-849 4149 chrX 12646854 12646891 chrX 12647009 12647046 5 155 7.5 9.5 8.5 0.5 192 chrX 12646854 intron Tomosyn + chrX 12646950 intron Tomosyn + chrX 12647046 intron Tomosyn + chrX_5_12645001 chrX_12645001 RAL-849 4150 chrX 12754655 12754679 chrX 12754893 12754917 9 236 5.0 15.5 10.2 0.8 262 chrX 12754655 intergenic CR44619 + chrX 12754786 intergenic CR44619 + chrX 12754917 intergenic CR44619 + chrX_9_12750001 chrX_12750001 RAL-849 4151 chrX 12785382 12785438 chrX 12785509 12785565 12 127 10.0 9.5 9.8 1.1 183 chrX 12785382 intergenic Pde9 -,CG32647 - chrX 12785474 intergenic Pde9 - chrX 12785565 3` UTR Pde9 - chrX_12_12785001 chrX_12785001 RAL-849 4152 chrX 12894338 12894415 chrX 12894465 12894542 5 127 6.5 9.0 7.8 0.6 204 chrX 12894338 intron Pde9 - chrX 12894440 intron Pde9 - chrX 12894542 intron Pde9 - chrX_5_12890001 chrX_12890001 RAL-849 4153 chrX 12930553 12930598 chrX 12937719 12937764 HMS-Beagle 12 7166 8.5 8.5 8.5 1.3 7211 chrX 12930553 intron fne + chrX 12934158 intron fne + chrX 12937764 intron fne + chrX_12_12930001 chrX_12930001 RAL-849 4154 chrX 11109417 11109417 chrX 12946235 12946235 8 1836818 21.5 19.0 20.2 0.4 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_8_12025001 chrX_12025001 RAL-849 4155 chrX 12946235 12946235 chrX 18572525 18572527 4 5626291 17.0 22.5 19.8 0.2 5626292 chrX 12946235 3` UTR fne + chrX 15759381 intron Graf - chrX 18572527 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-849 4156 chrX 12953844 12953913 chrX 12954032 12954101 19 187 4.5 3.5 4.0 3.8 257 chrX 12953844 intron hec - chrX 12953972 intron hec - chrX 12954101 intron hec - chrX_19_12950001 chrX_12950001 RAL-849 4157 chrX 12960720 12960781 chrX 12960851 12960912 12 131 9.5 5.0 7.2 1.5 192 chrX 12960720 3` UTR CG32642 + chrX 12960816 intergenic CG32642 + chrX 12960912 intergenic CG32642 + chrX_12_12960001 chrX_12960001 RAL-849 4158 chrX 12971640 12971689 chrX 12971767 12971816 16 123 15.0 6.5 10.8 1.4 176 chrX 12971640 intron,exon CR43636 -,CG15721 + chrX 12971728 intron,exon CR43636 -,CG15721 + chrX 12971816 intron,exon CR43636 -,CG15721 + chrX_16_12970001 chrX_12970001 RAL-849 4159 chrX 13099076 13099113 chrX 13099212 13099256 4 141 1.5 3.5 2.5 1.1 180 chrX 13099076 intron CG43313 - chrX 13099166 intron CG43313 - chrX 13099256 intron CG43313 - chrX_4_13095001 chrX_13095001 RAL-849 4160 chrX 13146558 13146619 chrX 13146696 13146757 17 138 6.0 7.0 6.5 2.3 199 chrX 13146558 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146757 intron CG32645 + chrX_17_13145001 chrX_13145001 RAL-849 4161 chrX 13172316 13172376 chrX 13172434 13172502 15 125 7.0 8.5 7.8 1.7 186 chrX 13172316 exon CG34411 - chrX 13172409 intron CG34411 - chrX 13172502 intron CG34411 - chrX_15_13170001 chrX_13170001 RAL-849 4162 chrX 13272134 13272169 chrX 13272256 13272275 15 125 8.5 5.5 7.0 1.9 141 chrX 13272134 intron HDAC4 - chrX 13272204 intron HDAC4 - chrX 13272275 intron HDAC4 - chrX_15_13270001 chrX_13270001 RAL-849 4163 chrX 13278110 13278183 chrX 13278243 13278316 14 132 6.0 8.0 7.0 1.8 206 chrX 13278110 intron HDAC4 - chrX 13278213 intron HDAC4 - chrX 13278316 intron HDAC4 - chrX_14_13275001 chrX_13275001 RAL-849 4164 chrX 13332751 13332784 chrX 13332882 13332909 9 130 9.5 7.0 8.2 1.0 158 chrX 13332751 intergenic not near genes chrX 13332830 intergenic not near genes chrX 13332909 intergenic not near genes chrX_9_13330001 chrX_13330001 RAL-849 4165 chrX 13332785 13332818 chrX 13332881 13332949 19 126 5.5 7.0 6.2 2.6 164 chrX 13332785 intergenic not near genes chrX 13332867 intergenic not near genes chrX 13332949 intergenic not near genes chrX_19_13330001 chrX_13330001 RAL-849 4166 chrX 13333727 13333733 chrX 13335303 13335309 5 1576 33.0 38.0 35.5 0.1 1582 chrX 13333727 intergenic not near genes chrX 13334518 intergenic not near genes chrX 13335309 intergenic RpS15Aa - chrX_5_13330001 chrX_13330001 RAL-849 4167 chrX 13333719 13333776 chrX 13335314 13335351 8 1578 34.0 35.5 34.8 0.2 1632 chrX 13333719 intergenic not near genes chrX 13334535 intergenic not near genes chrX 13335351 intergenic RpS15Aa - chrX_8_13330001 chrX_13330001 RAL-849 4168 chrX 13347003 13347040 chrX 13347160 13347197 4 157 0.5 13.0 6.8 0.5 194 chrX 13347003 intergenic not near genes chrX 13347100 intergenic not near genes chrX 13347197 intergenic not near genes chrX_4_13345001 chrX_13345001 RAL-849 4169 chrX 13354910 13354937 chrX 13355036 13355053 4 124 6.5 0.0 3.2 1.0 143 chrX 13354910 intergenic not near genes chrX 13354982 intergenic not near genes chrX 13355053 intergenic not near genes chrX_4_13350001 chrX_13350001 RAL-849 4170 chrX 13401439 13401512 chrX 13401838 13401902 jockey 10 400 4.0 5.0 4.5 1.8 463 chrX 13401439 intergenic CG1673 +,CG12725 - chrX 13401670 intergenic CG12725 -,CG1673 + chrX 13401902 3` UTR CG12725 - chrX_10_13400001 chrX_13400001 RAL-849 4171 chrX 13402971 13403034 chrX 13403148 13403211 X-element 25 174 7.0 4.5 5.8 3.7 240 chrX 13402971 intergenic CG12725 - chrX 13403091 intergenic CG12725 - chrX 13403211 intergenic CG12725 - chrX_25_13400001 chrX_13400001 RAL-849 4172 chrX 13429428 13429477 chrX 13430627 13430676 jockey 14 1199 6.0 8.0 7.0 1.8 1248 chrX 13429428 intergenic not near genes chrX 13430052 intergenic not near genes chrX 13430676 intergenic not near genes chrX_14_13430001 chrX_13430001 RAL-849 4173 chrX 13463609 13463670 chrX 13469236 13469297 mdg3 16 5627 6.5 5.5 6.0 2.3 5688 chrX 13463609 intron Neto + chrX 13466453 intron Neto + chrX 13469297 intron Neto + chrX_16_13465001 chrX_13465001 RAL-849 4174 chrX 13471381 13471392 chrX 13471508 13471525 7 131 4.5 14.0 9.2 0.7 144 chrX 13471381 intron Neto + chrX 13471453 intron Neto + chrX 13471525 intron Neto + chrX_7_13470001 chrX_13470001 RAL-849 4175 chrX 13734045 13734112 chrX 13734191 13734222 28 142 7.5 14.0 10.8 2.4 177 chrX 13734045 intron g - chrX 13734134 intron g - chrX 13734222 intron g - chrX_28_13730001 chrX_13730001 RAL-849 4176 chrX 13821422 13821473 chrX 13821549 13821600 17 125 1.0 5.0 3.0 4.2 178 chrX 13821422 intron Clic - chrX 13821511 intron Clic - chrX 13821600 intron Clic - chrX_17_13820001 chrX_13820001 RAL-849 4177 chrX 13934252 13934303 chrX 13934384 13934436 5 132 4.0 6.5 5.2 0.8 184 chrX 13934252 intron mamo - chrX 13934344 intron mamo - chrX 13934436 intron mamo - chrX_5_13930001 chrX_13930001 RAL-849 4178 chrX 13937929 13938008 chrX 13941250 13941329 I-element 15 3321 1.0 2.0 1.5 6.0 3400 chrX 13937929 intron mamo - chrX 13939629 intron mamo - chrX 13941329 intron mamo - chrX_15_13935001 chrX_13935001 RAL-849 4179 chrX 13943273 13943301 chrX 13943414 13943422 7 133 0.0 14.0 7.0 0.9 149 chrX 13943273 intron mamo - chrX 13943348 intron mamo - chrX 13943422 intron mamo - chrX_7_13940001 chrX_13940001 RAL-849 4180 chrX 13975878 13975897 chrX 13976005 13976024 6 127 0.0 8.0 4.0 1.2 146 chrX 13975878 intron mamo - chrX 13975951 intron mamo - chrX 13976024 intron mamo - chrX_6_13975001 chrX_13975001 RAL-849 4181 chrX 14104991 14105042 chrX 14114186 14114202 roo 28 9197 7.0 4.5 5.8 4.1 9211 chrX 14104991 intergenic not near genes chrX 14109596 intergenic not near genes chrX 14114202 5` UTR CR44657 + chrX_28_14105001 chrX_14105001 RAL-849 4182 chrX 14122567 14122622 chrX 14122693 14122748 21 124 6.0 6.0 6.0 3.0 181 chrX 14122567 intergenic not near genes chrX 14122658 intergenic not near genes chrX 14122748 intergenic not near genes chrX_21_14120001 chrX_14120001 RAL-849 4183 chrX 14131433 14131517 chrX 14131571 14131628 16 126 7.5 3.0 5.2 2.6 195 chrX 14131433 intergenic not near genes chrX 14131530 intergenic not near genes chrX 14131628 intergenic not near genes chrX_16_14130001 chrX_14130001 RAL-849 4184 chrX 14157561 14157615 chrX 14163268 14163322 297 4 5707 4.5 6.0 5.2 0.6 5761 chrX 14157561 intergenic not near genes chrX 14160442 intergenic not near genes chrX 14163322 intergenic not near genes chrX_4_14160001 chrX_14160001 RAL-849 4185 chrX 14167368 14167432 chrX 14167513 14167577 9 145 4.0 4.0 4.0 1.8 209 chrX 14167368 intergenic not near genes chrX 14167472 intergenic not near genes chrX 14167577 intergenic not near genes chrX_9_14165001 chrX_14165001 RAL-849 4186 chrX 14188027 14188099 chrX 14188160 14188232 15 132 7.5 4.0 5.8 2.2 205 chrX 14188027 intergenic CG12481 + chrX 14188130 intergenic CG12481 + chrX 14188232 intergenic CG12481 + chrX_15_14185001 chrX_14185001 RAL-849 4187 chrX 14190714 14190775 chrX 14191020 14191054 13 303 0.0 2.0 1.0 6.5 340 chrX 14190714 3` UTR CG11585 + chrX 14190884 intergenic CG11585 +,CG13403 - chrX 14191054 intergenic CG13403 -,CG11585 + chrX_13_14190001 chrX_14190001 RAL-849 4188 chrX 14209420 14209489 chrX 14209561 14209630 21 140 4.0 8.5 6.2 2.9 210 chrX 14209420 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209525 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209630 intron,intron l(1)G0007 +,l(1)G0469 - chrX_21_14205001 chrX_14205001 RAL-849 4189 chrX 14371764 14371820 chrX 14371894 14371929 14 127 10.5 0.0 5.2 2.3 165 chrX 14371764 intron dpr8 + chrX 14371846 intron dpr8 + chrX 14371929 intron dpr8 + chrX_14_14370001 chrX_14370001 RAL-849 4190 chrX 14381363 14381407 chrX 14381567 14381611 13 204 5.5 2.5 4.0 2.6 248 chrX 14381363 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381487 intron dpr8 + chrX 14381611 intron dpr8 + chrX_13_14380001 chrX_14380001 RAL-849 4191 chrX 14383920 14383946 chrX 14384054 14384069 8 133 9.0 12.5 10.8 0.7 149 chrX 14383920 intron dpr8 + chrX 14383994 intron dpr8 + chrX 14384069 intron dpr8 + chrX_8_14380001 chrX_14380001 RAL-849 4192 chrX 14401506 14401567 chrX 14401665 14401725 11 158 4.0 6.0 5.0 1.8 219 chrX 14401506 intron dpr8 + chrX 14401616 intron dpr8 + chrX 14401725 intron dpr8 + chrX_11_14400001 chrX_14400001 RAL-849 4193 chrX 14404981 14405028 chrX 14405109 14405156 17 127 3.5 2.5 3.0 4.2 175 chrX 14404981 intron dpr8 + chrX 14405068 intron dpr8 + chrX 14405156 intron dpr8 + chrX_17_14405001 chrX_14405001 RAL-849 4194 chrX 14406617 14406624 chrX 14406767 14406774 4 150 0.0 9.5 4.8 0.7 157 chrX 14406617 intron dpr8 + chrX 14406696 intron dpr8 + chrX 14406774 intron dpr8 + chrX_4_14405001 chrX_14405001 RAL-849 4195 chrX 14407234 14407259 chrX 14407366 14407391 6 132 2.5 0.0 1.2 2.7 157 chrX 14407234 intron dpr8 + chrX 14407312 intron dpr8 + chrX 14407391 intron dpr8 + chrX_6_14405001 chrX_14405001 RAL-849 4196 chrX 14412128 14412180 chrX 14412977 14413010 21 843 6.5 0.5 3.5 4.7 882 chrX 14412128 intron dpr8 + chrX 14412569 intron dpr8 + chrX 14413010 intron dpr8 + chrX_21_14410001 chrX_14410001 RAL-849 4197 chrX 14416263 14416313 chrX 14421081 14421131 F-element 7 4818 4.0 3.0 3.5 1.6 4868 chrX 14416263 intron dpr8 + chrX 14418697 intron dpr8 + chrX 14421131 intron dpr8 + chrX_7_14415001 chrX_14415001 RAL-849 4198 chrX 14531319 14531382 chrX 14531458 14531521 18 139 4.0 7.5 5.8 2.6 202 chrX 14531319 intergenic not near genes chrX 14531420 intergenic not near genes chrX 14531521 intergenic not near genes chrX_18_14530001 chrX_14530001 RAL-849 4199 chrX 14570026 14570104 chrX 14570158 14570235 12 132 3.5 0.0 1.8 4.3 209 chrX 14570026 intergenic not near genes chrX 14570130 intergenic not near genes chrX 14570235 intergenic not near genes chrX_12_14570001 chrX_14570001 RAL-849 4200 chrX 14571161 14571197 chrX 14571279 14571317 7 115 5.5 7.5 6.5 0.9 156 chrX 14571161 intergenic not near genes chrX 14571239 intergenic not near genes chrX 14571317 intergenic not near genes chrX_7_14570001 chrX_14570001 RAL-849 4201 chrX 14589686 14589698 chrX 14589973 14589985 pogo 5 287 4.0 6.0 5.0 0.8 299 chrX 14589686 intron CG9413 - chrX 14589836 intron CG9413 - chrX 14589985 intron CG9413 - chrX_5_14585001 chrX_14585001 RAL-849 4202 chrX 14589700 14589704 chrX 14589956 14589991 pogo 5 273 3.5 6.0 4.8 0.9 291 chrX 14589700 intron CG9413 - chrX 14589846 intron CG9413 - chrX 14589991 intron CG9413 - chrX_5_14585001 chrX_14585001 RAL-849 4203 chrX 14593751 14593822 chrX 14593883 14593954 15 132 4.5 3.0 3.8 3.1 203 chrX 14593751 intron CG9413 - chrX 14593852 intron CG9413 - chrX 14593954 intron CG9413 - chrX_15_14590001 chrX_14590001 RAL-849 4204 chrX 14628144 14628153 chrX 14628285 14628294 5 141 17.0 5.0 11.0 0.4 150 chrX 14628144 intron NetA - chrX 14628219 intron NetA - chrX 14628294 intron NetA - chrX_5_14625001 chrX_14625001 RAL-849 4205 chrX 14628154 14628208 chrX 14628281 14628349 16 134 5.5 3.5 4.5 2.9 195 chrX 14628154 intron NetA - chrX 14628252 intron NetA - chrX 14628349 intron NetA - chrX_16_14625001 chrX_14625001 RAL-849 4206 chrX 14636420 14636435 chrX 14641911 14641926 I-element 7 5490 13.5 6.0 9.8 0.6 5506 chrX 14636420 intron NetA - chrX 14639173 intron NetA - chrX 14641926 intron NetA - chrX_7_14635001 chrX_14635001 RAL-849 4207 chrX 14636437 14636475 chrX 14641903 14641965 I-element 13 5488 9.5 5.5 7.5 1.5 5528 chrX 14636437 intron NetA - chrX 14639201 intron NetA - chrX 14641965 intron NetA - chrX_13_14635001 chrX_14635001 RAL-849 4208 chrX 14777991 14778050 chrX 14782838 14782897 Doc 12 4847 7.5 12.0 9.8 1.1 4906 chrX 14777991 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782897 intergenic Ag5r2 - chrX_12_14780001 chrX_14780001 RAL-849 4209 chrX 14806718 14806789 chrX 14806849 14806929 14 137 2.5 0.0 1.2 6.4 211 chrX 14806718 intron rut - chrX 14806824 intron rut - chrX 14806929 intron rut - chrX_14_14805001 chrX_14805001 RAL-849 4210 chrX 14818716 14818790 chrX 14823970 14824039 copia 32 5249 3.5 3.5 3.5 7.1 5323 chrX 14818716 intron rut - chrX 14821378 intron rut - chrX 14824039 intron rut - chrX_32_14820001 chrX_14820001 RAL-849 4211 chrX 14849505 14849518 chrX 14849649 14849662 6 144 7.0 15.0 11.0 0.5 157 chrX 14849505 intron Flo2 + chrX 14849584 intron Flo2 + chrX 14849662 intron Flo2 + chrX_6_14845001 chrX_14845001 RAL-849 4212 chrX 14936817 14936875 chrX 14946124 14946182 roo 14 9307 5.5 5.5 5.5 2.2 9365 chrX 14936817 intron pdgy - chrX 14941500 intron pdgy - chrX 14946182 intron pdgy - chrX_14_14940001 chrX_14940001 RAL-849 4213 chrX 14968029 14968100 chrX 14968158 14968229 21 127 0.5 7.5 4.0 4.2 200 chrX 14968029 intron eag + chrX 14968129 intron eag + chrX 14968229 intron eag + chrX_21_14965001 chrX_14965001 RAL-849 4214 chrX 14981681 14981724 chrX 14981810 14981841 12 128 6.0 5.0 5.5 1.8 160 chrX 14981681 intron eag + chrX 14981761 intron eag + chrX 14981841 intron eag + chrX_12_14980001 chrX_14980001 RAL-849 4215 chrX 15017940 15017946 chrX 15018104 15018110 INE-1 5 164 9.0 10.5 9.8 0.5 170 chrX 15017940 exon hiw - chrX 15018025 intron hiw - chrX 15018110 intron hiw - chrX_5_15015001 chrX_15015001 RAL-849 4216 chrX 15070131 15070310 chrX 15070274 15070456 22 146 0.0 0.0 0.0 22.0 325 chrX 15070131 3` UTR Lsd-2 - chrX 15070294 3` UTR Lsd-2 - chrX 15070456 3` UTR Lsd-2 - chrX_22_15070001 chrX_15070001 RAL-849 4217 chrX 15123295 15123307 chrX 15123459 15123483 7 171 6.0 12.0 9.0 0.7 188 chrX 15123295 intergenic not near genes chrX 15123389 intergenic not near genes chrX 15123483 intergenic not near genes chrX_7_15120001 chrX_15120001 RAL-849 4218 chrX 15200595 15200627 chrX 15200721 15200753 9 126 8.0 8.0 8.0 1.0 158 chrX 15200595 intergenic not near genes chrX 15200674 intergenic not near genes chrX 15200753 intergenic not near genes chrX_9_15200001 chrX_15200001 RAL-849 4219 chrX 15204396 15204463 chrX 15204536 15204568 13 134 5.0 9.0 7.0 1.6 172 chrX 15204396 intergenic not near genes chrX 15204482 intergenic not near genes chrX 15204568 intergenic not near genes chrX_13_15200001 chrX_15200001 RAL-849 4220 chrX 15243694 15243709 chrX 15243824 15243839 5 130 4.5 14.0 9.2 0.5 145 chrX 15243694 intergenic PPYR1 - chrX 15243766 intergenic PPYR1 - chrX 15243839 intergenic PPYR1 - chrX_5_15240001 chrX_15240001 RAL-849 4221 chrX 15248221 15248250 chrX 15248347 15248376 8 125 9.5 5.0 7.2 1.0 155 chrX 15248221 intergenic not near genes chrX 15248298 intergenic not near genes chrX 15248376 intergenic not near genes chrX_8_15245001 chrX_15245001 RAL-849 4222 chrX 15273664 15273736 chrX 15274881 15274912 1360 21 1208 7.5 5.0 6.2 2.9 1248 chrX 15273664 intergenic not near genes chrX 15274288 intergenic not near genes chrX 15274912 intergenic not near genes chrX_21_15270001 chrX_15270001 RAL-849 4223 chrX 15326704 15326718 chrX 15326952 15326966 I-element 5 248 1.0 4.5 2.8 1.3 262 chrX 15326704 3` UTR Top1 + chrX 15326835 3` UTR Top1 + chrX 15326966 3` UTR Top1 + chrX_5_15325001 chrX_15325001 RAL-849 4224 chrX 15369788 15369809 chrX 15369921 15369932 5 131 8.0 7.0 7.5 0.6 144 chrX 15369788 intron acj6 - chrX 15369860 intron acj6 - chrX 15369932 intron acj6 - chrX_5_15365001 chrX_15365001 RAL-849 4225 chrX 15369813 15369857 chrX 15369920 15369990 11 131 5.0 7.0 6.0 1.6 177 chrX 15369813 intron acj6 - chrX 15369902 intron acj6 - chrX 15369990 intron acj6 - chrX_11_15365001 chrX_15365001 RAL-849 4226 chrX 15413009 15413067 chrX 15417361 15417419 Juan 15 4351 6.5 7.0 6.8 1.9 4410 chrX 15413009 intron Cngl - chrX 15415214 intron Cngl - chrX 15417419 intron Cngl - chrX_15_15415001 chrX_15415001 RAL-849 4227 chrX 15421873 15421942 chrX 15423434 15423503 pogo 12 1561 6.0 5.5 5.8 1.8 1630 chrX 15421873 intron Cngl - chrX 15422688 intron Cngl - chrX 15423503 intron Cngl - chrX_12_15420001 chrX_15420001 RAL-849 4228 chrX 15492398 15492406 chrX 15492650 15492658 7 252 14.5 4.0 9.2 0.7 260 chrX 15492398 intron Gmap + chrX 15492528 intron Gmap + chrX 15492658 intron Gmap + chrX_7_15490001 chrX_15490001 RAL-849 4229 chrX 15492409 15492473 chrX 15492661 15492727 11 252 7.0 7.0 7.0 1.4 318 chrX 15492409 intron Gmap + chrX 15492568 intron Gmap + chrX 15492727 intron Gmap + chrX_11_15490001 chrX_15490001 RAL-849 4230 chrX 15497545 15497618 chrX 15497684 15497758 16 138 5.5 3.0 4.2 3.1 213 chrX 15497545 intron,3` UTR Gmap +,CR44888 - chrX 15497652 intron,3` UTR Gmap +,CR44888 - chrX 15497758 intron,3` UTR Gmap +,CR44888 - chrX_16_15495001 chrX_15495001 RAL-849 4231 chrX 15519755 15519828 chrX 15519883 15519935 25 125 5.0 7.0 6.0 3.6 180 chrX 15519755 intron Ac13E - chrX 15519845 intron Ac13E - chrX 15519935 exon Ac13E - chrX_25_15515001 chrX_15515001 RAL-849 4232 chrX 15669871 15669920 chrX 15670003 15670052 11 132 6.5 4.0 5.2 1.8 181 chrX 15669871 intron CG15646 - chrX 15669962 intron CG15646 - chrX 15670052 intron CG15646 - chrX_11_15665001 chrX_15665001 RAL-849 4233 chrX 15671147 15671203 chrX 15671284 15671335 13 136 3.0 2.5 2.8 3.4 188 chrX 15671147 intergenic CG15646 - chrX 15671241 intergenic CG15646 - chrX 15671335 intergenic CG15646 - chrX_13_15670001 chrX_15670001 RAL-849 4234 chrX 15713181 15713253 chrX 15713327 15713399 26 145 6.5 5.0 5.8 3.8 218 chrX 15713181 intron CG8184 + chrX 15713290 intron CG8184 + chrX 15713399 intron CG8184 + chrX_26_15710001 chrX_15710001 RAL-849 4235 chrX 15891784 15891854 chrX 15891912 15891982 26 128 7.5 6.0 6.8 3.3 198 chrX 15891784 intergenic CG15916 +,shi + chrX 15891883 intergenic shi +,CG15916 + chrX 15891982 intergenic shi +,CG15916 + chrX_26_15890001 chrX_15890001 RAL-849 4236 chrX 15959501 15959563 chrX 15959639 15959701 18 138 9.5 8.5 9.0 1.8 200 chrX 15959501 intron mmd - chrX 15959601 intron mmd - chrX 15959701 intron mmd - chrX_18_15955001 chrX_15955001 RAL-849 4237 chrX 15970876 15970912 chrX 15971004 15971038 11 128 1.0 9.0 5.0 1.8 162 chrX 15970876 intron mmd - chrX 15970957 intron mmd - chrX 15971038 intron mmd - chrX_11_15970001 chrX_15970001 RAL-849 4238 chrX 15994991 15995052 chrX 15995189 15995247 24 196 5.0 6.0 5.5 3.7 256 chrX 15994991 3` UTR exd + chrX 15995119 3` UTR exd + chrX 15995247 3` UTR exd + chrX_24_15995001 chrX_15995001 RAL-849 4239 chrX 16100511 16100587 chrX 16100640 16100697 13 128 3.5 5.0 4.2 2.5 186 chrX 16100511 intron,intron CG42353 -,CG42354 - chrX 16100604 intron,intron CG42353 -,CG42354 - chrX 16100697 intron,intron CG42353 -,CG42354 - chrX_13_16100001 chrX_16100001 RAL-849 4240 chrX 16129583 16129591 chrX 16129719 16129727 4 136 0.5 23.5 12.0 0.3 144 chrX 16129583 intron disco-r - chrX 16129655 intron disco-r - chrX 16129727 intron disco-r - chrX_4_16125001 chrX_16125001 RAL-849 4241 chrX 16135593 16135613 chrX 16135720 16135735 5 125 6.5 12.0 9.2 0.5 142 chrX 16135593 intron disco-r - chrX 16135664 intron disco-r - chrX 16135735 intron disco-r - chrX_5_16135001 chrX_16135001 RAL-849 4242 chrX 16155202 16155280 chrX 16155489 16155567 25 285 6.5 5.5 6.0 3.6 365 chrX 16155202 intergenic not near genes chrX 16155384 intergenic not near genes chrX 16155567 intergenic not near genes chrX_25_16155001 chrX_16155001 RAL-849 4243 chrX 16171570 16171582 chrX 16171704 16171716 6 134 2.0 5.0 3.5 1.3 146 chrX 16171570 intergenic not near genes chrX 16171643 intergenic not near genes chrX 16171716 intergenic not near genes chrX_6_16170001 chrX_16170001 RAL-849 4244 chrX 16192395 16192441 chrX 16192528 16192569 11 128 14.5 13.5 14.0 0.7 174 chrX 16192395 intergenic not near genes chrX 16192482 intergenic not near genes chrX 16192569 intergenic not near genes chrX_11_16190001 chrX_16190001 RAL-849 4245 chrX 16222742 16222803 chrX 16231142 16231203 roo 15 8400 0.5 5.5 3.0 3.8 8461 chrX 16222742 intergenic not near genes chrX 16226972 intergenic not near genes chrX 16231203 intergenic not near genes chrX_15_16225001 chrX_16225001 RAL-849 4246 chrX 16251723 16251728 chrX 16251852 16251857 4 129 6.0 13.0 9.5 0.4 134 chrX 16251723 intergenic not near genes chrX 16251790 intergenic not near genes chrX 16251857 intergenic not near genes chrX_4_16250001 chrX_16250001 RAL-849 4247 chrX 16253822 16253855 chrX 16253959 16253992 10 136 0.0 3.0 1.5 4.0 170 chrX 16253822 intergenic snRNA:U5:14B - chrX 16253907 intergenic snRNA:U5:14B - chrX 16253992 intergenic snRNA:U5:14B - chrX_10_16250001 chrX_16250001 RAL-849 4248 chrX 16265129 16265153 chrX 16265254 16265279 6 126 0.0 0.5 0.2 5.0 150 chrX 16265129 intergenic CG12507 - chrX 16265204 intergenic CG12507 - chrX 16265279 3` UTR CG12507 - chrX_6_16265001 chrX_16265001 RAL-849 4249 chrX 16295488 16295543 chrX 16295622 16295671 10 133 6.5 0.0 3.2 2.4 183 chrX 16295488 intron CG9911 - chrX 16295580 intron CG9911 - chrX 16295671 intron CG9911 - chrX_10_16295001 chrX_16295001 RAL-849 4250 chrX 16329359 16329445 chrX 16329506 16329578 11 144 0.0 4.0 2.0 3.7 219 chrX 16329359 exon CG9919 - chrX 16329468 intron CG9919 - chrX 16329578 exon CG9919 - chrX_11_16325001 chrX_16325001 RAL-849 4251 chrX 16340625 16340658 chrX 16349830 16349863 roo 7 9205 5.5 4.5 5.0 1.2 9238 chrX 16340625 intergenic Dsp1 + chrX 16345244 intergenic not near genes chrX 16349863 intergenic sl + chrX_7_16345001 chrX_16345001 RAL-849 4252 chrX 16492621 16492670 chrX 16498248 16498297 mdg3 10 5626 7.0 10.5 8.8 1.0 5676 chrX 16492621 intron para - chrX 16495459 intron para - chrX 16498297 exon para - chrX_10_16495001 chrX_16495001 RAL-849 4253 chrX 16511301 16511311 chrX 16511436 16511446 7 135 0.0 24.0 12.0 0.5 145 chrX 16511301 intron para - chrX 16511374 intron para - chrX 16511446 intron para - chrX_7_16510001 chrX_16510001 RAL-849 4254 chrX 16569664 16569685 chrX 16569795 16569816 10 131 14.5 18.5 16.5 0.6 152 chrX 16569664 intron CanA-14F - chrX 16569740 intron CanA-14F - chrX 16569816 intron CanA-14F - chrX_10_16565001 chrX_16565001 RAL-849 4255 chrX 16622240 16622292 chrX 16622368 16622419 12 127 1.5 3.5 2.5 3.4 179 chrX 16622240 intergenic not near genes chrX 16622330 intergenic not near genes chrX 16622419 intergenic not near genes chrX_12_16620001 chrX_16620001 RAL-849 4256 chrX 16668736 16668800 chrX 16668863 16668929 19 126 6.0 4.5 5.2 3.1 193 chrX 16668736 intergenic r +,CG13012 - chrX 16668832 3` UTR CG13012 - chrX 16668929 3` UTR CG13012 - chrX_19_16665001 chrX_16665001 RAL-849 4257 chrX 16689577 16689650 chrX 16689713 16689786 21 132 7.5 5.5 6.5 2.8 209 chrX 16689577 intron Sep4 - chrX 16689682 intron Sep4 - chrX 16689786 intron Sep4 - chrX_21_16685001 chrX_16685001 RAL-849 4258 chrX 16690423 16690478 chrX 16690545 16690594 11 122 1.5 8.5 5.0 1.8 171 chrX 16690423 intron Sep4 - chrX 16690508 intron Sep4 - chrX 16690594 intron Sep4 - chrX_11_16690001 chrX_16690001 RAL-849 4259 chrX 16707958 16707974 chrX 16708142 16708158 5 184 0.5 8.0 4.2 1.0 200 chrX 16707958 intron CG4678 + chrX 16708058 intron CG4678 + chrX 16708158 exon CG4678 + chrX_5_16705001 chrX_16705001 RAL-849 4260 chrX 16785232 16785298 chrX 16785386 16785452 15 154 7.5 9.0 8.2 1.6 220 chrX 16785232 3` UTR CG9609 - chrX 16785342 3` UTR CG9609 - chrX 16785452 3` UTR CG9609 - chrX_15_16785001 chrX_16785001 RAL-849 4261 chrX 16821188 16821258 chrX 16821318 16821388 7 130 2.5 0.0 1.2 3.2 200 chrX 16821188 intron CG4829 + chrX 16821288 intron CG4829 + chrX 16821388 intron CG4829 + chrX_7_16820001 chrX_16820001 RAL-849 4262 chrX 16869648 16869672 chrX 16869781 16869805 4 130 2.5 4.0 3.2 1.0 157 chrX 16869648 intron CG13003 - chrX 16869726 intron CG13003 - chrX 16869805 intron CG13003 - chrX_4_16865001 chrX_16865001 RAL-849 4263 chrX 16870038 16870097 chrX 16870170 16870230 13 132 5.5 7.5 6.5 1.7 192 chrX 16870038 intron CG13003 - chrX 16870134 intron CG13003 - chrX 16870230 intron CG13003 - chrX_13_16870001 chrX_16870001 RAL-849 4264 chrX 16880121 16880156 chrX 16880262 16880297 7 141 9.5 10.5 10.0 0.6 176 chrX 16880121 intergenic not near genes chrX 16880209 intergenic not near genes chrX 16880297 intergenic not near genes chrX_7_16880001 chrX_16880001 RAL-849 4265 chrX 16935974 16936019 chrX 16936442 16936487 jockey 13 468 5.0 5.5 5.2 2.1 513 chrX 16935974 intron CG4928 + chrX 16936230 intron CG4928 + chrX 16936487 intron CG4928 + chrX_13_16935001 chrX_16935001 RAL-849 4266 chrX 1053117 1053123 chrX 16983076 16983076 5 15929956 20.0 23.0 21.5 0.2 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-849 4267 chrX 17011658 17011955 chrX 17011856 17012088 30 167 12.0 6.0 9.0 3.0 430 chrX 17011658 intron CG45002 - chrX 17011873 intron CG45002 - chrX 17012088 intron CG45002 - chrX_30_17010001 chrX_17010001 RAL-849 4268 chrX 17011963 17011992 chrX 17012078 17012120 11 130 8.5 8.0 8.2 1.2 157 chrX 17011963 intron CG45002 - chrX 17012042 intron CG45002 - chrX 17012120 intron CG45002 - chrX_11_17010001 chrX_17010001 RAL-849 4269 chrX 17037927 17038002 chrX 17038071 17038146 20 138 3.0 4.0 3.5 4.4 219 chrX 17037927 intron CG45002 - chrX 17038036 intron CG45002 - chrX 17038146 intron CG45002 - chrX_20_17035001 chrX_17035001 RAL-849 4270 chrX 17089571 17089623 chrX 17089747 17089799 10 176 5.0 8.0 6.5 1.3 228 chrX 17089571 intergenic not near genes chrX 17089685 intergenic not near genes chrX 17089799 intergenic not near genes chrX_10_17085001 chrX_17085001 RAL-849 4271 chrX 17161932 17161959 chrX 17162058 17162085 10 126 4.5 9.5 7.0 1.2 153 chrX 17161932 intron baz + chrX 17162008 intron baz + chrX 17162085 intron baz + chrX_10_17160001 chrX_17160001 RAL-849 4272 chrX 17176062 17176099 chrX 17176190 17176225 7 127 4.0 4.0 4.0 1.4 163 chrX 17176062 5` UTR baz + chrX 17176144 5` UTR baz + chrX 17176225 5` UTR baz + chrX_7_17175001 chrX_17175001 RAL-849 4273 chrX 17195169 17195224 chrX 17200304 17200358 flea 22 5133 7.5 9.5 8.5 2.3 5189 chrX 17195169 3` UTR baz + chrX 17197764 3` UTR baz + chrX 17200358 3` UTR baz + chrX_22_17195001 chrX_17195001 RAL-849 4274 chrX 17205803 17205855 chrX 17205943 17205995 14 140 5.0 9.0 7.0 1.8 192 chrX 17205803 intergenic not near genes chrX 17205899 intergenic not near genes chrX 17205995 intergenic CG32564 + chrX_14_17205001 chrX_17205001 RAL-849 4275 chrX 17229911 17229938 chrX 17230064 17230091 7 153 11.0 5.0 8.0 0.8 180 chrX 17229911 intergenic CG10597 - chrX 17230001 intergenic CG10597 - chrX 17230091 intergenic CG10597 - chrX_7_17230001 chrX_17230001 RAL-849 4276 chrX 17237483 17237535 chrX 17237617 17237669 5 133 5.5 11.0 8.2 0.5 186 chrX 17237483 intron f + chrX 17237576 intron f + chrX 17237669 intron f + chrX_5_17235001 chrX_17235001 RAL-849 4277 chrX 17316336 17316356 chrX 17316470 17316490 4 134 8.5 1.0 4.8 0.7 154 chrX 17316336 intron B-H2 + chrX 17316413 intron B-H2 + chrX 17316490 intron B-H2 + chrX_4_17315001 chrX_17315001 RAL-849 4278 chrX 17357487 17357526 chrX 17357631 17357650 8 142 6.0 4.5 5.2 1.3 163 chrX 17357487 intergenic not near genes chrX 17357568 intergenic not near genes chrX 17357650 intergenic not near genes chrX_8_17355001 chrX_17355001 RAL-849 4279 chrX 17431317 17431340 chrX 17431708 17431731 jockey 9 391 12.0 11.5 11.8 0.7 414 chrX 17431317 intron CG12994 - chrX 17431524 intron CG12994 - chrX 17431731 intron CG12994 - chrX_9_17430001 chrX_17430001 RAL-849 4280 chrX 17434387 17434432 chrX 17434530 17434575 4 143 3.0 2.0 2.5 1.1 188 chrX 17434387 intron CG12994 - chrX 17434481 intron CG12994 - chrX 17434575 intron CG12994 - chrX_4_17430001 chrX_17430001 RAL-849 4281 chrX 17443072 17443105 chrX 17443246 17443279 11 174 5.5 2.0 3.8 2.3 207 chrX 17443072 intron CG12994 - chrX 17443176 intron CG12994 - chrX 17443279 intron CG12994 - chrX_11_17440001 chrX_17440001 RAL-849 4282 chrX 17455737 17455803 chrX 17455887 17455953 19 150 2.0 4.0 3.0 4.8 216 chrX 17455737 intergenic not near genes chrX 17455845 intergenic not near genes chrX 17455953 intergenic not near genes chrX_19_17455001 chrX_17455001 RAL-849 4283 chrX 17479892 17479932 chrX 17480019 17480059 7 127 11.0 7.5 9.2 0.7 167 chrX 17479892 intron CG43658 - chrX 17479976 intron CG43658 - chrX 17480059 intron CG43658 - chrX_7_17475001 chrX_17475001 RAL-849 4284 chrX 17502301 17502309 chrX 17502431 17502439 5 130 14.0 8.5 11.2 0.4 138 chrX 17502301 intron CG43658 - chrX 17502370 intron CG43658 - chrX 17502439 intron CG43658 - chrX_5_17500001 chrX_17500001 RAL-849 4285 chrX 17502311 17502371 chrX 17502429 17502501 19 129 6.0 8.5 7.2 2.3 190 chrX 17502311 intron CG43658 - chrX 17502406 intron CG43658 - chrX 17502501 intron CG43658 - chrX_19_17500001 chrX_17500001 RAL-849 4286 chrX 17544971 17545031 chrX 17545103 17545163 20 132 5.0 5.0 5.0 3.3 192 chrX 17544971 intron CG43658 - chrX 17545067 intron CG43658 - chrX 17545163 intron CG43658 - chrX_20_17545001 chrX_17545001 RAL-849 4287 chrX 17680890 17680913 chrX 17681016 17681039 8 126 6.0 11.5 8.8 0.8 149 chrX 17680890 intron chas - chrX 17680964 intron chas - chrX 17681039 intron chas - chrX_8_17680001 chrX_17680001 RAL-849 4288 chrX 17680914 17680922 chrX 17680981 17681048 4 111 5.5 6.5 6.0 0.6 134 chrX 17680914 intron chas - chrX 17680981 intron chas - chrX 17681048 intron chas - chrX_4_17680001 chrX_17680001 RAL-849 4289 chrX 17685408 17685473 chrX 17685541 17685606 13 133 0.0 3.0 1.5 5.2 198 chrX 17685408 intron chas - chrX 17685507 intron chas - chrX 17685606 intron chas - chrX_13_17685001 chrX_17685001 RAL-849 4290 chrX 17726421 17726463 chrX 17726535 17726591 7 125 4.0 4.0 4.0 1.4 170 chrX 17726421 intron CG42684 + chrX 17726506 intron CG42684 + chrX 17726591 intron CG42684 + chrX_7_17725001 chrX_17725001 RAL-849 4291 chrX 17741291 17741363 chrX 17741487 17741559 17 196 1.0 7.0 4.0 3.4 268 chrX 17741291 intron CG42684 + chrX 17741425 intron CG42684 + chrX 17741559 intron CG42684 + chrX_17_17740001 chrX_17740001 RAL-849 4292 chrX 17782172 17782232 chrX 17782320 17782380 14 148 6.5 4.0 5.2 2.3 208 chrX 17782172 intergenic not near genes chrX 17782276 intergenic not near genes chrX 17782380 intergenic not near genes chrX_14_17780001 chrX_17780001 RAL-849 4293 chrX 17792936 17792969 chrX 17796270 17796282 flea 10 3343 4.0 8.5 6.2 1.4 3346 chrX 17792936 intron OdsH + chrX 17794609 intron OdsH + chrX 17796282 intron OdsH + chrX_10_17790001 chrX_17790001 RAL-849 4294 chrX 17847650 17847671 chrX 17847796 17847817 7 145 12.5 3.5 8.0 0.8 167 chrX 17847650 exon Ucp4A + chrX 17847734 3` UTR Ucp4A + chrX 17847817 3` UTR Ucp4A + chrX_7_17845001 chrX_17845001 RAL-849 4295 chrX 17847672 17847714 chrX 17847793 17847860 13 142 4.5 3.5 4.0 2.6 188 chrX 17847672 3` UTR Ucp4A + chrX 17847766 3` UTR Ucp4A + chrX 17847860 3` UTR Ucp4A + chrX_13_17845001 chrX_17845001 RAL-849 4296 chrX 17968852 17968923 chrX 17969021 17969081 10 167 3.0 5.5 4.2 1.9 229 chrX 17968852 intron Sh - chrX 17968966 intron Sh - chrX 17969081 intron Sh - chrX_10_17965001 chrX_17965001 RAL-849 4297 chrX 18040380 18040448 chrX 18040518 18040586 12 138 3.5 3.0 3.2 2.9 206 chrX 18040380 5` UTR Sh - chrX 18040483 intron Sh - chrX 18040586 intron Sh - chrX_12_18040001 chrX_18040001 RAL-849 4298 chrX 18126553 18126837 chrX 18126726 18126959 44 148 4.5 4.0 4.2 8.5 406 chrX 18126553 intron CG32553 - chrX 18126756 intron CG32553 - chrX 18126959 5` UTR CG32553 - chrX_44_18125001 chrX_18125001 RAL-849 4299 chrX 18176998 18177024 chrX 18177141 18177167 7 143 1.0 3.0 2.0 2.3 169 chrX 18176998 intergenic not near genes chrX 18177082 intergenic not near genes chrX 18177167 intergenic Frq2 + chrX_7_18175001 chrX_18175001 RAL-849 4300 chrX 18194028 18194095 chrX 18194613 18194680 BS 34 583 6.0 7.0 6.5 4.5 652 chrX 18194028 intron Frq2 + chrX 18194354 intron Frq2 + chrX 18194680 intron Frq2 + chrX_34_18190001 chrX_18190001 RAL-849 4301 chrX 18256438 18256445 chrX 18256600 18256607 4 162 4.0 0.0 2.0 1.3 169 chrX 18256438 intergenic CR45613 - chrX 18256522 intergenic CR45613 - chrX 18256607 intergenic CR45613 - chrX_4_18255001 chrX_18255001 RAL-849 4302 chrX 18268581 18268616 chrX 18268736 18268775 4 156 0.0 10.5 5.2 0.6 194 chrX 18268581 intergenic not near genes chrX 18268678 intergenic not near genes chrX 18268775 intergenic not near genes chrX_4_18265001 chrX_18265001 RAL-849 4303 chrX 18320441 18320487 chrX 18320635 18320669 5 192 0.0 0.0 0.0 5.0 228 chrX 18320441 intron CG6023 - chrX 18320555 intron CG6023 - chrX 18320669 intron CG6023 - chrX_5_18320001 chrX_18320001 RAL-849 4304 chrX 18429457 18429517 chrX 18434818 18434878 Transpac 17 5361 9.5 9.0 9.2 1.7 5421 chrX 18429457 intergenic not near genes chrX 18432168 intergenic not near genes chrX 18434878 intergenic not near genes chrX_17_18430001 chrX_18430001 RAL-849 4305 chrX 18479848 18479870 chrX 18479985 18480007 10 137 4.0 10.0 7.0 1.2 159 chrX 18479848 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479928 intergenic Hayan -,CR45714 +,CG32547 - chrX 18480007 3` UTR Hayan - chrX_10_18475001 chrX_18475001 RAL-849 4306 chrX 18558727 18558806 chrX 18558858 18558938 15 132 3.0 6.5 4.8 2.6 211 chrX 18558727 intron Bx + chrX 18558832 intron Bx + chrX 18558938 intron Bx + chrX_15_18555001 chrX_18555001 RAL-849 4307 chrX 12946235 12946235 chrX 18572525 18572525 8 5626290 17.0 22.5 19.8 0.4 5626290 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_8_15755001 chrX_15755001 RAL-849 4308 chrX 18644973 18645039 chrX 18645121 18645187 27 146 4.0 7.0 5.5 4.2 214 chrX 18644973 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645187 intron Rip11 - chrX_27_18645001 chrX_18645001 RAL-849 4309 chrX 18698801 18698876 chrX 18698968 18699043 22 166 5.0 4.5 4.8 3.8 242 chrX 18698801 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699043 intergenic not near genes chrX_22_18695001 chrX_18695001 RAL-849 4310 chrX 18754309 18754344 chrX 18758011 18758061 297 5 3711 5.0 8.0 6.5 0.7 3752 chrX 18754309 intergenic not near genes chrX 18756185 intergenic not near genes chrX 18758061 intergenic not near genes chrX_5_18755001 chrX_18755001 RAL-849 4311 chrX 18859963 18860034 chrX 18860095 18860167 31 132 6.0 3.0 4.5 5.6 204 chrX 18859963 3` UTR CG7288 + chrX 18860065 3` UTR CG7288 + chrX 18860167 intergenic CG7288 +,CG32544 + chrX_31_18860001 chrX_18860001 RAL-849 4312 chrX 18888603 18888682 chrX 18888740 18888817 28 136 4.5 4.5 4.5 5.1 214 chrX 18888603 3` UTR CG7332 + chrX 18888710 3` UTR CG7332 + chrX 18888817 3` UTR CG7332 + chrX_28_18885001 chrX_18885001 RAL-849 4313 chrX 18927588 18927604 chrX 18927714 18927730 4 126 11.0 5.0 8.0 0.4 142 chrX 18927588 intergenic not near genes chrX 18927659 intergenic not near genes chrX 18927730 intergenic not near genes chrX_4_18925001 chrX_18925001 RAL-849 4314 chrX 18947457 18947523 chrX 18947600 18947666 23 143 8.0 4.5 6.2 3.2 209 chrX 18947457 intron CG43759 + chrX 18947562 intron CG43759 + chrX 18947666 intron CG43759 + chrX_23_18945001 chrX_18945001 RAL-849 4315 chrX 18957031 18957076 chrX 18965737 18965782 roo 5 8706 3.5 0.0 1.8 1.8 8751 chrX 18957031 intron CG43759 + chrX 18961406 intron CG43759 + chrX 18965782 intron CG43759 + chrX_5_18960001 chrX_18960001 RAL-849 4316 chrX 19014321 19014379 chrX 19014450 19014493 11 124 5.0 10.0 7.5 1.3 172 chrX 19014321 intron CG43759 + chrX 19014407 intron CG43759 + chrX 19014493 intron CG43759 + chrX_11_19010001 chrX_19010001 RAL-849 4317 chrX 19020441 19020449 chrX 19020889 19020897 5 448 13.5 0.0 6.8 0.6 456 chrX 19020441 intron CG43759 + chrX 19020669 intron CG43759 + chrX 19020897 intron CG43759 + chrX_5_19020001 chrX_19020001 RAL-849 4318 chrX 19020452 19020472 chrX 19020880 19020890 8 425 10.5 0.0 5.2 1.3 438 chrX 19020452 intron CG43759 + chrX 19020671 intron CG43759 + chrX 19020890 intron CG43759 + chrX_8_19020001 chrX_19020001 RAL-849 4319 chrX 19036390 19036399 chrX 19036516 19036525 5 126 6.0 0.0 3.0 1.2 135 chrX 19036390 intergenic not near genes chrX 19036458 intergenic not near genes chrX 19036525 intergenic not near genes chrX_5_19035001 chrX_19035001 RAL-849 4320 chrX 19048179 19048250 chrX 19048319 19048373 19 138 6.5 3.0 4.8 3.3 194 chrX 19048179 intergenic not near genes chrX 19048276 intergenic not near genes chrX 19048373 intergenic not near genes chrX_19_19045001 chrX_19045001 RAL-849 4321 chrX 19060365 19060436 chrX 19065199 19065272 Doc 14 4835 8.0 5.0 6.5 1.9 4907 chrX 19060365 intron CG14190 + chrX 19062818 intron CG14190 + chrX 19065272 intron CG14190 + chrX_14_19060001 chrX_19060001 RAL-849 4322 chrX 19073639 19073696 chrX 19073770 19073833 17 137 7.5 6.0 6.8 2.2 194 chrX 19073639 intergenic not near genes chrX 19073736 intergenic not near genes chrX 19073833 intergenic not near genes chrX_17_19070001 chrX_19070001 RAL-849 4323 chrX 19084044 19084117 chrX 19084214 19084262 18 169 2.5 5.5 4.0 3.6 218 chrX 19084044 intergenic CR45503 + chrX 19084153 intergenic CR45503 + chrX 19084262 intergenic CR45503 + chrX_18_19080001 chrX_19080001 RAL-849 4324 chrX 19099612 19099670 chrX 19099745 19099803 17 132 9.5 5.5 7.5 2.0 191 chrX 19099612 intergenic not near genes chrX 19099708 intergenic not near genes chrX 19099803 intergenic not near genes chrX_17_19095001 chrX_19095001 RAL-849 4325 chrX 19187481 19187508 chrX 19187599 19187635 4 118 7.5 3.5 5.5 0.6 154 chrX 19187481 intergenic CG33253 + chrX 19187558 intergenic CG33253 +,Mec2 + chrX 19187635 intergenic CG33253 +,Mec2 + chrX_4_19185001 chrX_19185001 RAL-849 4326 chrX 19356948 19357019 chrX 19358439 19358528 NOF 15 1504 10.0 0.0 5.0 2.5 1580 chrX 19356948 intron kek5 + chrX 19357738 intron kek5 + chrX 19358528 intron kek5 + chrX_15_19355001 chrX_19355001 RAL-849 4327 chrX 19380113 19380177 chrX 19380404 19380468 pogo 21 291 13.0 7.5 10.2 1.9 355 chrX 19380113 intron kek5 + chrX 19380290 intron kek5 + chrX 19380468 intron kek5 + chrX_21_19380001 chrX_19380001 RAL-849 4328 chrX 16983076 16983076 chrX 19404963 19404965 6 2421887 24.0 13.0 18.5 0.3 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_6_18190001 chrX_18190001 RAL-849 4329 chrX 19430508 19430564 chrX 19430656 19430712 19 148 0.0 4.5 2.2 5.9 204 chrX 19430508 intron kek5 + chrX 19430610 intron kek5 + chrX 19430712 intron kek5 + chrX_19_19430001 chrX_19430001 RAL-849 4330 chrX 19472079 19472152 chrX 19472700 19472771 jockey 13 618 5.5 3.5 4.5 2.4 692 chrX 19472079 intergenic kek5 + chrX 19472425 intergenic not near genes chrX 19472771 intergenic not near genes chrX_13_19470001 chrX_19470001 RAL-849 4331 chrX 19560624 19560683 chrX 19560773 19560832 20 149 10.5 10.0 10.2 1.8 208 chrX 19560624 3` UTR Grip84 - chrX 19560728 3` UTR Grip84 - chrX 19560832 3` UTR Grip84 - chrX_20_19560001 chrX_19560001 RAL-849 4332 chrX 19576513 19576581 chrX 19576636 19576709 20 127 4.0 8.0 6.0 2.9 196 chrX 19576513 intron Tao - chrX 19576611 intron Tao - chrX 19576709 exon Tao - chrX_20_19575001 chrX_19575001 RAL-849 4333 chrX 19710027 19710093 chrX 19711863 19711929 S-element 28 1834 8.0 6.5 7.2 3.4 1902 chrX 19710027 intron meso18E - chrX 19710978 intron meso18E - chrX 19711929 intron meso18E - chrX_28_19710001 chrX_19710001 RAL-849 4334 chrX 19755486 19755540 chrX 19755621 19755674 16 135 9.0 7.0 8.0 1.8 188 chrX 19755486 intron Pmp70 + chrX 19755580 intron Pmp70 + chrX 19755674 intron Pmp70 + chrX_16_19755001 chrX_19755001 RAL-849 4335 chrX 19797305 19797335 chrX 19804668 19804696 Stalker4 11 7363 16.0 7.5 11.8 0.9 7391 chrX 19797305 intergenic not near genes chrX 19801000 intergenic not near genes chrX 19804696 intergenic not near genes chrX_11_19800001 chrX_19800001 RAL-849 4336 chrX 19881411 19881477 chrX 19881542 19881608 22 130 3.5 4.0 3.8 4.6 197 chrX 19881411 intron Hers + chrX 19881510 intron Hers + chrX 19881608 intron Hers + chrX_22_19880001 chrX_19880001 RAL-849 4337 chrX 19884071 19884103 chrX 19884162 19884188 10 110 8.5 8.5 8.5 1.1 117 chrX 19884071 intron Hers + chrX 19884130 intron Hers + chrX 19884188 intron Hers + chrX_10_19880001 chrX_19880001 RAL-849 4338 chrX 19971772 19971826 chrX 19971899 19971953 17 127 4.0 4.5 4.2 3.3 181 chrX 19971772 intergenic not near genes chrX 19971862 intergenic not near genes chrX 19971953 intergenic not near genes chrX_17_19970001 chrX_19970001 RAL-849 4339 chrX 19981514 19981586 chrX 19981640 19981712 17 125 5.5 4.0 4.8 2.9 198 chrX 19981514 intergenic not near genes chrX 19981613 intergenic not near genes chrX 19981712 intergenic not near genes chrX_17_19980001 chrX_19980001 RAL-849 4340 chrX 19983383 19983404 chrX 19983518 19983539 5 135 1.5 0.0 0.8 2.8 156 chrX 19983383 intergenic not near genes chrX 19983461 intergenic not near genes chrX 19983539 intergenic not near genes chrX_5_19980001 chrX_19980001 RAL-849 4341 chrX 19992367 19992435 chrX 19992493 19992507 6 109 11.0 6.5 8.8 0.6 140 chrX 19992367 intergenic not near genes chrX 19992437 intergenic not near genes chrX 19992507 intergenic not near genes chrX_6_19990001 chrX_19990001 RAL-849 4342 chrX 20041480 20041549 chrX 20041610 20041679 20 130 5.0 6.0 5.5 3.1 199 chrX 20041480 intron Dop2R - chrX 20041580 intron Dop2R - chrX 20041679 intron Dop2R - chrX_20_20040001 chrX_20040001 RAL-849 4343 chrX 20052741 20052807 chrX 20052875 20052947 19 134 5.5 4.0 4.8 3.3 206 chrX 20052741 intron Dop2R - chrX 20052844 intron Dop2R - chrX 20052947 intron Dop2R - chrX_19_20050001 chrX_20050001 RAL-849 4344 chrX 20065760 20065832 chrX 20065889 20065961 24 128 7.5 4.5 6.0 3.4 201 chrX 20065760 intergenic not near genes chrX 20065860 intergenic not near genes chrX 20065961 intergenic not near genes chrX_24_20065001 chrX_20065001 RAL-849 4345 chrX 20082721 20082767 chrX 20082843 20082899 16 130 11.5 6.5 9.0 1.6 178 chrX 20082721 intergenic not near genes chrX 20082810 intergenic not near genes chrX 20082899 intergenic not near genes chrX_16_20080001 chrX_20080001 RAL-849 4346 chrX 20096989 20096997 chrX 20097222 20097230 5 233 20.0 5.5 12.8 0.4 241 chrX 20096989 intergenic not near genes chrX 20097110 intergenic not near genes chrX 20097230 intergenic not near genes chrX_5_20095001 chrX_20095001 RAL-849 4347 chrX 20096998 20097058 chrX 20097221 20097291 30 232 7.0 5.5 6.2 4.2 293 chrX 20096998 intergenic not near genes chrX 20097144 intergenic not near genes chrX 20097291 intergenic not near genes chrX_30_20095001 chrX_20095001 RAL-849 4348 chrX 20125348 20125395 chrX 20125480 20125527 14 132 0.0 6.5 3.2 3.3 179 chrX 20125348 intergenic CG34331 + chrX 20125438 intergenic CG34331 + chrX 20125527 intergenic CG34331 + chrX_14_20125001 chrX_20125001 RAL-849 4349 chrX 20125731 20125748 chrX 20125858 20125875 5 127 9.5 9.5 9.5 0.5 144 chrX 20125731 intergenic CG34331 + chrX 20125803 intergenic not near genes chrX 20125875 intergenic not near genes chrX_5_20125001 chrX_20125001 RAL-849 4350 chrX 20132253 20132308 chrX 20132386 20132441 17 131 8.0 6.0 7.0 2.1 188 chrX 20132253 intergenic not near genes chrX 20132347 intergenic not near genes chrX 20132441 intergenic not near genes chrX_17_20130001 chrX_20130001 RAL-849 4351 chrX 20269882 20269956 chrX 20270014 20270088 20 131 3.5 5.0 4.2 3.8 206 chrX 20269882 intergenic Inx6 - chrX 20269985 intergenic Inx6 - chrX 20270088 intergenic Inx6 - chrX_20_20265001 chrX_20265001 RAL-849 4352 chrX 20271459 20271526 chrX 20271601 20271663 13 141 7.0 0.0 3.5 2.9 204 chrX 20271459 intergenic not near genes chrX 20271561 intergenic not near genes chrX 20271663 intergenic not near genes chrX_13_20270001 chrX_20270001 RAL-849 4353 chrX 20312838 20312909 chrX 20312966 20313037 19 128 5.0 2.5 3.8 4.0 199 chrX 20312838 intron CG1504 - chrX 20312938 intron CG1504 - chrX 20313037 intron CG1504 - chrX_19_20310001 chrX_20310001 RAL-849 4354 chrX 20314232 20314256 chrX 20314354 20314364 8 126 7.5 12.0 9.8 0.7 132 chrX 20314232 intron CG1504 - chrX 20314298 intron CG1504 - chrX 20314364 intron CG1504 - chrX_8_20310001 chrX_20310001 RAL-849 4355 chrX 20359189 20359203 chrX 20360491 20360505 9 1301 5.0 23.0 14.0 0.6 1316 chrX 20359189 intergenic not near genes chrX 20359847 intergenic not near genes chrX 20360505 intergenic not near genes chrX_9_20355001 chrX_20355001 RAL-849 4356 chrX 20362118 20362167 chrX 20362508 20362557 17 390 2.0 2.5 2.2 5.3 439 chrX 20362118 intergenic not near genes chrX 20362338 intergenic not near genes chrX 20362557 intergenic not near genes chrX_17_20360001 chrX_20360001 RAL-849 4357 chrX 20362850 20362852 chrX 20362952 20362972 4 119 1.0 0.0 0.5 2.7 122 chrX 20362850 intergenic not near genes chrX 20362911 intergenic not near genes chrX 20362972 intergenic not near genes chrX_4_20360001 chrX_20360001 RAL-849 4358 chrX 20377269 20377341 chrX 20378786 20378837 hobo 10 1514 5.5 6.0 5.8 1.5 1568 chrX 20377269 intergenic not near genes chrX 20378053 intergenic not near genes chrX 20378837 intergenic not near genes chrX_10_20375001 chrX_20375001 RAL-849 4359 chrX 20415031 20415079 chrX 20415157 20415205 5 126 5.5 0.5 3.0 1.2 174 chrX 20415031 intergenic not near genes chrX 20415118 intergenic not near genes chrX 20415205 intergenic not near genes chrX_5_20415001 chrX_20415001 RAL-849 4360 chrX 20426181 20426233 chrX 20428350 20428406 17 2165 56.5 58.5 57.5 0.3 2225 chrX 20426181 exon cactin + chrX 20427294 intergenic CG11710 -,CG15456 - chrX 20428406 exon CG11710 - chrX_17_20425001 chrX_20425001 RAL-849 4361 chrX 20443161 20443197 chrX 20443287 20443323 8 126 7.0 13.5 10.2 0.7 162 chrX 20443161 exon CG1695 + chrX 20443242 intron CG1695 + chrX 20443323 intron CG1695 + chrX_8_20440001 chrX_20440001 RAL-849 4362 chrX 20467967 20468041 chrX 20468106 20468173 8 136 1.5 0.0 0.8 4.4 206 chrX 20467967 intron GstT3 + chrX 20468070 intron GstT3 + chrX 20468173 intron GstT3 + chrX_8_20465001 chrX_20465001 RAL-849 4363 chrX 20493874 20493926 chrX 20494083 20494137 11 210 0.0 7.0 3.5 2.4 263 chrX 20493874 intron RhoGAP19D - chrX 20494006 intron RhoGAP19D - chrX 20494137 intron RhoGAP19D - chrX_11_20490001 chrX_20490001 RAL-849 4364 chrX 20528557 20528629 chrX 20528955 20529027 24 398 7.0 7.0 7.0 3.0 470 chrX 20528557 intergenic not near genes chrX 20528792 intergenic not near genes chrX 20529027 intergenic not near genes chrX_24_20525001 chrX_20525001 RAL-849 4365 chrX 20531744 20531784 chrX 20531893 20531933 17 149 0.0 8.5 4.2 3.3 189 chrX 20531744 intergenic not near genes chrX 20531838 intergenic not near genes chrX 20531933 intergenic not near genes chrX_17_20530001 chrX_20530001 RAL-849 4366 chrX 20534974 20535035 chrX 20535102 20535126 4 119 4.5 0.0 2.2 1.2 152 chrX 20534974 intergenic not near genes chrX 20535050 intergenic not near genes chrX 20535126 intergenic not near genes chrX_4_20535001 chrX_20535001 RAL-849 4367 chrX 20578036 20578091 chrX 20578165 20578220 6 126 6.5 6.5 6.5 0.8 184 chrX 20578036 intergenic not near genes chrX 20578128 intergenic not near genes chrX 20578220 intergenic not near genes chrX_6_20575001 chrX_20575001 RAL-849 4368 chrX 20662272 20662337 chrX 20662405 20662465 11 130 2.5 4.5 3.5 2.4 193 chrX 20662272 intron CG1835 + chrX 20662368 intron CG1835 + chrX 20662465 intron CG1835 + chrX_11_20660001 chrX_20660001 RAL-849 4369 chrX 20710412 20710424 chrX 20710539 20710551 6 127 6.5 0.0 3.2 1.4 139 chrX 20710412 intergenic not near genes chrX 20710482 intergenic not near genes chrX 20710551 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-849 4370 chrX 20780186 20780239 chrX 20780454 20780513 10 274 7.0 9.5 8.2 1.1 327 chrX 20780186 intron,3` UTR shakB -,CG32507 - chrX 20780350 intron,3` UTR shakB -,CG32507 - chrX 20780513 intron,3` UTR shakB -,CG32507 - chrX_10_20780001 chrX_20780001 RAL-849 4371 chrX 20783957 20784032 chrX 20784119 20784194 25 161 4.0 3.5 3.8 5.2 237 chrX 20783957 intron shakB - chrX 20784076 intron shakB - chrX 20784194 intron shakB - chrX_25_20780001 chrX_20780001 RAL-849 4372 chrX 20836676 20836746 chrX 20844328 20844398 roo 17 7652 2.5 3.0 2.8 4.5 7722 chrX 20836676 intron shakB - chrX 20840537 intron shakB - chrX 20844398 intron shakB - chrX_17_20840001 chrX_20840001 RAL-849 4373 chrX 20911872 20911919 chrX 20911999 20912046 11 124 7.5 4.5 6.0 1.6 174 chrX 20911872 intron shakB - chrX 20911959 intron shakB - chrX 20912046 intron shakB - chrX_11_20910001 chrX_20910001 RAL-849 4374 chrX 20940679 20940727 chrX 20942197 20942230 hobo 10 1517 8.0 3.5 5.8 1.5 1551 chrX 20940679 intergenic not near genes chrX 20941454 intergenic not near genes chrX 20942230 intergenic not near genes chrX_10_20940001 chrX_20940001 RAL-849 4375 chrX 20988841 20988855 chrX 20988986 20989000 6 145 18.5 12.5 15.5 0.4 159 chrX 20988841 intergenic not near genes chrX 20988920 intergenic not near genes chrX 20989000 intergenic not near genes chrX_6_20985001 chrX_20985001 RAL-849 4376 chrX 21008609 21008684 chrX 21008748 21008822 10 138 2.0 2.0 2.0 3.3 213 chrX 21008609 intergenic not near genes chrX 21008716 intergenic not near genes chrX 21008822 intergenic not near genes chrX_10_21005001 chrX_21005001 RAL-849 4377 chrX 21022190 21022232 chrX 21022409 21022451 14 219 7.5 6.0 6.8 1.8 261 chrX 21022190 intergenic not near genes chrX 21022320 intergenic not near genes chrX 21022451 intergenic not near genes chrX_14_21020001 chrX_21020001 RAL-849 4378 chrX 21029105 21029170 chrX 21029372 21029434 6 266 3.0 8.0 5.5 0.9 329 chrX 21029105 3` UTR CG1529 - chrX 21029270 3` UTR CG1529 - chrX 21029434 3` UTR CG1529 - chrX_6_21025001 chrX_21025001 RAL-849 4379 chrX 21032266 21032279 chrX 21032408 21032421 4 142 3.5 8.5 6.0 0.6 155 chrX 21032266 intergenic CG1529 - chrX 21032344 intergenic CG1529 - chrX 21032421 intergenic CG1529 - chrX_4_21030001 chrX_21030001 RAL-849 4380 chrX 21084512 21084575 chrX 21085077 21085140 14 564 3.5 6.0 4.8 2.4 628 chrX 21084512 intergenic not near genes chrX 21084826 intergenic not near genes chrX 21085140 intergenic not near genes chrX_14_21080001 chrX_21080001 RAL-849 4381 chrX 21086091 21086149 chrX 21087170 21087228 jockey 17 1079 10.5 8.5 9.5 1.6 1137 chrX 21086091 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087228 intergenic not near genes chrX_17_21085001 chrX_21085001 RAL-849 4382 chrX 21190486 21190785 chrX 21190692 21190916 9 147 0.0 0.0 0.0 9.0 430 chrX 21190486 intergenic not near genes chrX 21190701 intergenic not near genes chrX 21190916 intergenic not near genes chrX_9_21190001 chrX_21190001 RAL-849 4383 chrX 21308829 21308871 chrX 21308984 21309047 7 168 9.0 0.0 4.5 1.3 218 chrX 21308829 exon CG1801 - chrX 21308938 intron CG1801 - chrX 21309047 intron CG1801 - chrX_7_21305001 chrX_21305001 RAL-849 4384 chrX 21328074 21328148 chrX 21328235 21328310 10 161 1.0 4.0 2.5 2.9 236 chrX 21328074 3` UTR CG1486 + chrX 21328192 intergenic CG1486 +,tty - chrX 21328310 intergenic CG1486 +,tty - chrX_10_21325001 chrX_21325001 RAL-849 4385 chrX 21410644 21410665 chrX 21410773 21410794 7 129 0.0 8.0 4.0 1.4 150 chrX 21410644 intergenic CR45003 - chrX 21410719 intergenic CR45003 - chrX 21410794 intergenic CR45003 - chrX_7_21410001 chrX_21410001 RAL-849 4386 chrX 21427388 21427408 chrX 21427586 21427606 5 198 13.5 2.5 8.0 0.6 218 chrX 21427388 intron CG42343 - chrX 21427497 intron CG42343 - chrX 21427606 intron CG42343 - chrX_5_21425001 chrX_21425001 RAL-849 4387 chrX 21443408 21443486 chrX 21443636 21443714 22 228 7.5 4.5 6.0 3.1 306 chrX 21443408 intron CG42343 - chrX 21443561 intron CG42343 - chrX 21443714 intron CG42343 - chrX_22_21440001 chrX_21440001 RAL-849 4388 chrX 21455163 21455235 chrX 21455392 21455472 9 233 4.0 3.5 3.8 1.9 309 chrX 21455163 intron CG42343 - chrX 21455318 intron CG42343 - chrX 21455472 intron CG42343 - chrX_9_21455001 chrX_21455001 RAL-849 4389 chrX 21458652 21458713 chrX 21464138 21464199 Ivk 14 5486 9.0 9.5 9.2 1.4 5547 chrX 21458652 intergenic not near genes chrX 21461426 intergenic not near genes chrX 21464199 intergenic not near genes chrX_14_21460001 chrX_21460001 RAL-849 4390 chrX 21509986 21510008 chrX 21510125 21510147 7 139 0.0 13.0 6.5 0.9 161 chrX 21509986 intron CR45082 - chrX 21510066 intron CR45082 - chrX 21510147 intron CR45082 - chrX_7_21510001 chrX_21510001 RAL-849 4391 chrX 21565403 21565432 chrX 21565531 21565560 4 128 4.0 10.5 7.2 0.5 157 chrX 21565403 intergenic not near genes chrX 21565482 intergenic not near genes chrX 21565560 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-849 4392 chrX 21595544 21595573 chrX 21598648 21598677 micropia 9 3104 17.0 3.5 10.2 0.8 3133 chrX 21595544 intergenic not near genes chrX 21597110 intergenic not near genes chrX 21598677 intergenic not near genes chrX_9_21595001 chrX_21595001 RAL-849 4393 chrX 21668210 21668290 chrX 21668345 21668403 37 134 11.0 1.5 6.2 5.1 193 chrX 21668210 intergenic not near genes chrX 21668306 intergenic not near genes chrX 21668403 intergenic not near genes chrX_37_21665001 chrX_21665001 RAL-849 4394 chrX 22522587 22522653 chrX 22525458 22525523 NOF 9 2871 9.0 5.5 7.2 1.1 2936 chrX 22522587 intron CG17600 + chrX 22524055 intron CG17600 + chrX 22525523 intron CG17600 + chrX_9_22520001 chrX_22520001 RAL-849 4395 chrX 22564570 22564581 chrX 22575092 22575103 jockey 4 10522 19.5 8.0 13.8 0.3 10533 chrX 22564570 intergenic not near genes chrX 22569836 intergenic not near genes chrX 22575103 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-849 4396 chrX 22585464 22585524 chrX 22585597 22585658 10 134 2.5 0.0 1.2 4.5 194 chrX 22585464 intron Cda4 - chrX 22585561 intron Cda4 - chrX 22585658 intron Cda4 - chrX_10_22585001 chrX_22585001 RAL-849 4397 chrX 22697459 22697511 chrX 22701806 22701858 Juan 12 4347 10.5 9.5 10.0 1.1 4399 chrX 22697459 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701858 intron CR44997 + chrX_12_22695001 chrX_22695001 RAL-849 4398 chrX 22734417 22734447 chrX 22734545 22734576 11 129 3.0 4.5 3.8 2.3 159 chrX 22734417 intron CR44997 + chrX 22734496 intron CR44997 + chrX 22734576 intron CR44997 + chrX_11_22730001 chrX_22730001 RAL-849 4399 chrX 22870843 22870894 chrX 22870960 22870982 9 132 4.0 5.5 4.8 1.6 139 chrX 22870843 intron,3` UTR CG42346 +,CR43656 - chrX 22870912 intron,3` UTR CG42346 +,CR43656 - chrX 22870982 intron,3` UTR CG42346 +,CR43656 - chrX_9_22870001 chrX_22870001 RAL-849 4400 chrX 22895686 22895716 chrX 22895854 22895884 11 166 10.5 3.5 7.0 1.4 198 chrX 22895686 intergenic not near genes chrX 22895785 intergenic not near genes chrX 22895884 intergenic not near genes chrX_11_22895001 chrX_22895001 RAL-849 4401 chrX 22895720 22895757 chrX 22895852 22895876 13 158 6.0 3.5 4.8 2.2 156 chrX 22895720 intergenic not near genes chrX 22895798 intergenic not near genes chrX 22895876 intergenic not near genes chrX_13_22895001 chrX_22895001 RAL-849 4402 chrX 22960780 22960798 chrX 22961032 22961050 6 252 0.0 7.5 3.8 1.2 270 chrX 22960780 3` UTR CG40485 - chrX 22960915 3` UTR CG40485 - chrX 22961050 3` UTR CG40485 - chrX_6_22960001 chrX_22960001 RAL-849 4403 chrX 22982802 22982864 chrX 22983035 22983097 17 233 6.5 8.5 7.5 2.0 295 chrX 22982802 3` UTR,exon stnA -,stnB - chrX 22982950 intron,intron stnA -,stnB - chrX 22983097 intron,intron stnA -,stnB - chrX_17_22980001 chrX_22980001 RAL-849 4404 chrX 22987069 22987107 chrX 22989778 22989816 Burdock 8 2709 4.0 4.0 4.0 1.6 2747 chrX 22987069 intron,intron stnA -,stnB - chrX 22988442 intron,intron stnA -,stnB - chrX 22989816 intron,intron stnA -,stnB - chrX_8_22985001 chrX_22985001 RAL-849 4405 chrX 22996274 22996329 chrX 23003558 23003613 roo 24 7283 6.0 13.0 9.5 2.3 7339 chrX 22996274 intron,intron stnA -,stnB - chrX 22999944 intron,intron stnA -,stnB - chrX 23003613 intron,intron stnA -,stnB - chrX_24_22995001 chrX_22995001 RAL-849 4406 chrY 864670 864744 chrY 864797 864870 13 126 36.5 40.5 38.5 0.3 200 chrY 864670 intergenic not near genes chrY 864770 intergenic not near genes chrY 864870 intergenic not near genes chrY_13_860001 chrY_860001 RAL-849 4407 chrY 975590 975820 chrY 975757 976033 29 158 295.0 271.5 283.2 0.1 443 chrY 975590 intergenic not near genes chrY 975812 intergenic not near genes chrY 976033 intergenic not near genes chrY_29_975001 chrY_975001 RAL-849 4408 chrY 1419863 1419880 chrY 1420166 1420184 8 304 18.5 16.5 17.5 0.4 321 chrY 1419863 intergenic not near genes chrY 1420024 intergenic not near genes chrY 1420184 intergenic not near genes chrY_8_1420001 chrY_1420001 RAL-849 4409 chrY 1445413 1445426 chrY 1447394 1447406 6 1980 22.0 23.0 22.5 0.3 1993 chrY 1445413 intergenic not near genes chrY 1446410 intergenic not near genes chrY 1447406 intergenic not near genes chrY_6_1445001 chrY_1445001 RAL-849 4410 chrY 3664944 3665008 chrY 3665098 3665162 9 154 1.5 1.0 1.2 4.1 218 chrY 3664944 intergenic CG40948 + chrY 3665053 intergenic CG40948 + chrY 3665162 intergenic not near genes chrY_9_3665001 chrY_3665001 RAL-849 4411 chrY 3666390 3666460 chrY 3666593 3666663 4 200 1.5 1.5 1.5 1.6 273 chrY 3666390 intergenic not near genes chrY 3666526 intergenic not near genes chrY 3666663 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-849