SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47458 47479 chr2L 52563 52582 jockey 9 5104 2.5 6.0 4.2 1.7 5124 chr2L 47458 intron Cda5 - chr2L 50020 intron Cda5 - chr2L 52582 intron Cda5 - chr2L_9_50001 chr2L_50001 RAL-83 2 chr2L 89720 89746 chr2L 89797 89823 6 76 4.0 2.0 3.0 1.5 103 chr2L 89720 intergenic not near genes chr2L 89772 intergenic not near genes chr2L 89823 intergenic not near genes chr2L_6_85001 chr2L_85001 RAL-83 3 chr2L 323454 323478 chr2L 323532 323556 9 73 6.0 5.0 5.5 1.4 102 chr2L 323454 intron Plc21C + chr2L 323505 intron Plc21C + chr2L 323556 intron Plc21C + chr2L_9_320001 chr2L_320001 RAL-83 4 chr2L 325150 325155 chr2L 325203 325232 4 71 4.5 5.0 4.8 0.7 82 chr2L 325150 intron Plc21C + chr2L 325191 intron Plc21C + chr2L 325232 intron Plc21C + chr2L_4_325001 chr2L_325001 RAL-83 5 chr2L 347906 347912 chr2L 355406 355412 blood 4 7500 2.0 1.0 1.5 1.6 7506 chr2L 347906 3` UTR Plc21C + chr2L 351659 intron Plc21C + chr2L 355412 3` UTR Plc21C + chr2L_4_350001 chr2L_350001 RAL-83 6 chr2L 467356 467494 chr2L 467455 467583 9 91 3.5 3.5 3.5 2.0 227 chr2L 467356 intron CG4297 - chr2L 467470 intron CG4297 - chr2L 467583 intron CG4297 - chr2L_9_465001 chr2L_465001 RAL-83 7 chr2L 686925 686940 chr2L 695963 695980 roo 5 9039 3.5 6.0 4.8 0.9 9055 chr2L 686925 intron ds - chr2L 691452 intron ds - chr2L 695980 intron ds - chr2L_5_690001 chr2L_690001 RAL-83 8 chr2L 686941 686949 chr2L 695961 695989 roo 7 9036 3.0 4.5 3.8 1.5 9048 chr2L 686941 intron ds - chr2L 691465 intron ds - chr2L 695989 intron ds - chr2L_7_690001 chr2L_690001 RAL-83 9 chr2L 764565 764591 chr2L 764644 764671 12 79 2.0 2.0 2.0 4.0 106 chr2L 764565 intergenic not near genes chr2L 764618 intergenic not near genes chr2L 764671 intergenic not near genes chr2L_12_760001 chr2L_760001 RAL-83 10 chr2L 770481 770493 chr2L 772244 772274 Bari1 7 1777 2.5 4.0 3.2 1.7 1793 chr2L 770481 intergenic not near genes chr2L 771378 intergenic not near genes chr2L 772274 intergenic CR44614 + chr2L_7_770001 chr2L_770001 RAL-83 11 chr2L 877840 877860 chr2L 877921 877926 10 79 6.0 1.0 3.5 2.2 86 chr2L 877840 3` UTR,exon CG15824 -,ninaA + chr2L 877883 3` UTR,intron CG15824 -,ninaA + chr2L 877926 3` UTR,intron CG15824 -,ninaA + chr2L_10_875001 chr2L_875001 RAL-83 12 chr2L 906555 906572 chr2L 906637 906654 7 82 0.0 3.5 1.8 2.5 99 chr2L 906555 intergenic not near genes chr2L 906604 intergenic not near genes chr2L 906654 intergenic not near genes chr2L_7_905001 chr2L_905001 RAL-83 13 chr2L 964556 964571 chr2L 964640 964655 4 84 4.0 4.0 4.0 0.8 99 chr2L 964556 intergenic not near genes chr2L 964606 intergenic not near genes chr2L 964655 intergenic not near genes chr2L_4_960001 chr2L_960001 RAL-83 14 chr2L 971917 971940 chr2L 972006 972012 5 86 1.5 4.5 3.0 1.2 95 chr2L 971917 intergenic not near genes chr2L 971964 intergenic not near genes chr2L 972012 intergenic not near genes chr2L_5_970001 chr2L_970001 RAL-83 15 chr2L 976883 976909 chr2L 984519 984544 roo 7 7634 2.0 1.5 1.8 2.5 7661 chr2L 976883 intergenic not near genes chr2L 980714 intergenic not near genes chr2L 984544 intergenic not near genes chr2L_7_980001 chr2L_980001 RAL-83 16 chr2L 1023015 1023035 chr2L 1023095 1023113 10 79 1.5 4.5 3.0 2.5 98 chr2L 1023015 intron IA-2 - chr2L 1023064 intron IA-2 - chr2L 1023113 intron IA-2 - chr2L_10_1020001 chr2L_1020001 RAL-83 17 chr2L 1028860 1028874 chr2L 1028944 1028970 4 94 1.5 3.0 2.2 1.2 110 chr2L 1028860 intron IA-2 - chr2L 1028915 intron IA-2 - chr2L 1028970 intron IA-2 - chr2L_4_1025001 chr2L_1025001 RAL-83 18 chr2L 1066093 1066125 chr2L 1066173 1066206 15 78 7.0 5.0 6.0 2.1 113 chr2L 1066093 intron S - chr2L 1066150 intron S - chr2L 1066206 intron S - chr2L_15_1065001 chr2L_1065001 RAL-83 19 chr2L 1156862 1156878 chr2L 1156967 1156973 4 102 2.5 3.5 3.0 1.0 111 chr2L 1156862 intron capt - chr2L 1156918 intron capt - chr2L 1156973 intron capt - chr2L_4_1155001 chr2L_1155001 RAL-83 20 chr2L 1220129 1220162 chr2L 1227594 1227628 blood 9 7464 4.0 1.0 2.5 2.6 7499 chr2L 1220129 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227628 intron CG42329 + chr2L_9_1220001 chr2L_1220001 RAL-83 21 chr2L 1228364 1228392 chr2L 1228639 1228667 6 268 6.5 2.0 4.2 1.2 303 chr2L 1228364 exon CG42329 + chr2L 1228516 exon CG42329 + chr2L 1228667 intron CG42329 + chr2L_6_1225001 chr2L_1225001 RAL-83 22 chr2L 1570687 1570722 chr2L 1573559 1573579 F-element 12 2869 3.0 4.0 3.5 2.7 2892 chr2L 1570687 intron haf + chr2L 1572133 intron haf + chr2L 1573579 intron haf + chr2L_12_1570001 chr2L_1570001 RAL-83 23 chr2L 1590964 1590986 chr2L 1591030 1591062 5 74 4.5 5.0 4.8 0.9 98 chr2L 1590964 intron haf + chr2L 1591013 intron haf + chr2L 1591062 intron haf + chr2L_5_1590001 chr2L_1590001 RAL-83 24 chr2L 1635402 1635429 chr2L 1635538 1635565 4 136 0.0 0.5 0.2 3.3 163 chr2L 1635402 intergenic not near genes chr2L 1635484 intergenic not near genes chr2L 1635565 intergenic not near genes chr2L_4_1635001 chr2L_1635001 RAL-83 25 chr2L 1642830 1642837 chr2L 1642900 1642902 6 72 4.0 1.5 2.8 1.6 72 chr2L 1642830 intergenic not near genes chr2L 1642866 intergenic not near genes chr2L 1642902 intergenic not near genes chr2L_6_1640001 chr2L_1640001 RAL-83 26 chr2L 1655343 1655375 chr2L 1655433 1655465 8 88 1.5 0.5 1.0 4.0 122 chr2L 1655343 intron chinmo + chr2L 1655404 intron chinmo + chr2L 1655465 intron chinmo + chr2L_8_1655001 chr2L_1655001 RAL-83 27 chr2L 1678980 1679009 chr2L 1686445 1686474 blood 9 7464 2.0 2.0 2.0 3.0 7494 chr2L 1678980 intron chinmo + chr2L 1682727 intron chinmo + chr2L 1686474 intron chinmo + chr2L_9_1680001 chr2L_1680001 RAL-83 28 chr2L 1711356 1711389 chr2L 1711680 1711690 mdg3 16 320 1.5 7.5 4.5 2.9 334 chr2L 1711356 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711523 3` UTR frtz - chr2L 1711690 3` UTR frtz - chr2L_16_1710001 chr2L_1710001 RAL-83 29 chr2L 1721823 1721855 chr2L 1721907 1721939 5 83 0.5 2.0 1.2 2.3 116 chr2L 1721823 intron Rim2 - chr2L 1721881 intron Rim2 - chr2L 1721939 intron Rim2 - chr2L_5_1720001 chr2L_1720001 RAL-83 30 chr2L 1905084 1905100 chr2L 1905187 1905203 5 103 3.0 1.5 2.2 1.6 119 chr2L 1905084 intron CG7337 + chr2L 1905144 intron CG7337 + chr2L 1905203 intron CG7337 + chr2L_5_1905001 chr2L_1905001 RAL-83 31 chr2L 1938304 1938327 chr2L 1938414 1938437 10 108 6.0 0.0 3.0 2.5 133 chr2L 1938304 intron CG7337 + chr2L 1938370 intron CG7337 + chr2L 1938437 intron CG7337 + chr2L_10_1935001 chr2L_1935001 RAL-83 32 chr2L 2100377 2100389 chr2L 2109527 2109539 roo 6 9150 4.5 2.5 3.5 1.3 9162 chr2L 2100377 intron dpr3 - chr2L 2104958 intron dpr3 - chr2L 2109539 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-83 33 chr2L 2100390 2100402 chr2L 2109524 2109543 roo 8 9144 3.5 2.0 2.8 2.1 9153 chr2L 2100390 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109543 intron dpr3 - chr2L_8_2100001 chr2L_2100001 RAL-83 34 chr2L 2112126 2112146 chr2L 2119786 2119807 opus 7 7659 3.5 8.5 6.0 1.0 7681 chr2L 2112126 intergenic not near genes chr2L 2115966 intergenic not near genes chr2L 2119807 intergenic not near genes chr2L_7_2115001 chr2L_2115001 RAL-83 35 chr2L 2250422 2250445 chr2L 2251187 2251211 5 766 3.5 0.0 1.8 1.8 789 chr2L 2250422 intergenic Ser12 - chr2L 2250816 exon Ser12 - chr2L 2251211 exon Ser12 - chr2L_5_2250001 chr2L_2250001 RAL-83 36 chr2L 2260802 2260833 chr2L 2260888 2260917 6 86 6.0 4.5 5.2 1.0 115 chr2L 2260802 intergenic not near genes chr2L 2260860 intergenic not near genes chr2L 2260917 intergenic not near genes chr2L_6_2260001 chr2L_2260001 RAL-83 37 chr2L 2294060 2294075 chr2L 2299245 2299250 copia 4 5190 0.5 2.5 1.5 1.6 5190 chr2L 2294060 intergenic not near genes chr2L 2296655 intergenic not near genes chr2L 2299250 intergenic not near genes chr2L_4_2295001 chr2L_2295001 RAL-83 38 chr2L 2311071 2311091 chr2L 2311167 2311187 6 96 0.0 0.0 0.0 6.0 116 chr2L 2311071 intron CG9967 - chr2L 2311129 intron CG9967 - chr2L 2311187 intron CG9967 - chr2L_6_2310001 chr2L_2310001 RAL-83 39 chr2L 2320281 2320313 chr2L 2320838 2320871 10 558 2.0 2.0 2.0 3.3 590 chr2L 2320281 intron,intron CG9967 -,eys + chr2L 2320576 intron,intron CG9967 -,eys + chr2L 2320871 intron,intron CG9967 -,eys + chr2L_10_2320001 chr2L_2320001 RAL-83 40 chr2L 2472572 2472607 chr2L 2472750 2472774 19 175 4.0 2.0 3.0 4.8 202 chr2L 2472572 3` UTR CR45286 - chr2L 2472673 3` UTR CR45286 - chr2L 2472774 3` UTR CR45286 - chr2L_19_2470001 chr2L_2470001 RAL-83 41 chr2L 2480716 2480727 chr2L 2480805 2480827 6 93 4.5 1.5 3.0 1.5 111 chr2L 2480716 intergenic not near genes chr2L 2480772 intergenic not near genes chr2L 2480827 intergenic not near genes chr2L_6_2480001 chr2L_2480001 RAL-83 42 chr2L 2525203 2525225 chr2L 2525467 2525481 9 264 3.0 2.5 2.8 2.4 278 chr2L 2525203 intergenic not near genes chr2L 2525342 intergenic not near genes chr2L 2525481 intergenic not near genes chr2L_9_2525001 chr2L_2525001 RAL-83 43 chr2L 2537486 2537514 chr2L 2537573 2537602 9 85 3.0 1.5 2.2 2.8 116 chr2L 2537486 intergenic not near genes chr2L 2537544 intergenic not near genes chr2L 2537602 intergenic not near genes chr2L_9_2535001 chr2L_2535001 RAL-83 44 chr2L 2605745 2605772 chr2L 2605835 2605849 6 88 0.5 4.5 2.5 1.7 104 chr2L 2605745 intergenic not near genes chr2L 2605797 intergenic not near genes chr2L 2605849 intergenic not near genes chr2L_6_2605001 chr2L_2605001 RAL-83 45 chr2L 2661196 2661235 chr2L 2663034 2663073 I-element 7 1833 1.0 2.0 1.5 2.8 1877 chr2L 2661196 intergenic not near genes chr2L 2662134 intergenic not near genes chr2L 2663073 intergenic not near genes chr2L_7_2660001 chr2L_2660001 RAL-83 46 chr2L 2772619 2772627 chr2L 2779197 2779200 297 4 6579 2.0 2.0 2.0 1.3 6581 chr2L 2772619 3` UTR Syt1 - chr2L 2775910 intron Syt1 - chr2L 2779200 3` UTR Syt1 - chr2L_4_2775001 chr2L_2775001 RAL-83 47 chr2L 2826570 2826575 chr2L 2826640 2826642 5 78 0.0 5.0 2.5 1.4 72 chr2L 2826570 intron Duox - chr2L 2826606 intron Duox - chr2L 2826642 intron Duox - chr2L_5_2825001 chr2L_2825001 RAL-83 48 chr2L 2933304 2933331 chr2L 2935481 2935498 pogo 5 2174 9.0 3.5 6.2 0.7 2194 chr2L 2933304 intron lilli + chr2L 2934401 intron lilli + chr2L 2935498 intron lilli + chr2L_5_2930001 chr2L_2930001 RAL-83 49 chr2L 3073030 3073062 chr2L 3078233 3078265 copia 14 5203 4.5 3.5 4.0 2.8 5235 chr2L 3073030 intron toc - chr2L 3075648 intron toc - chr2L 3078265 intron toc - chr2L_14_3075001 chr2L_3075001 RAL-83 50 chr2L 3078518 3078538 chr2L 3078794 3078826 13 283 2.0 8.0 5.0 2.2 308 chr2L 3078518 intron toc - chr2L 3078672 intron toc - chr2L 3078826 intron toc - chr2L_13_3075001 chr2L_3075001 RAL-83 51 chr2L 3093975 3093994 chr2L 3094052 3094068 5 76 5.0 5.0 5.0 0.8 93 chr2L 3093975 intron toc - chr2L 3094022 intron toc - chr2L 3094068 intron toc - chr2L_5_3090001 chr2L_3090001 RAL-83 52 chr2L 3108867 3108898 chr2L 3108942 3108975 6 74 0.0 0.0 0.0 6.0 108 chr2L 3108867 intron toc - chr2L 3108921 intron toc - chr2L 3108975 intron toc - chr2L_6_3105001 chr2L_3105001 RAL-83 53 chr2L 3128982 3129011 chr2L 3129098 3129122 9 115 3.5 5.0 4.2 1.7 140 chr2L 3128982 intron,exon toc -,CG15403 + chr2L 3129052 intron,exon toc -,CG15403 + chr2L 3129122 intron,exon toc -,CG15403 + chr2L_9_3125001 chr2L_3125001 RAL-83 54 chr2L 3152503 3152518 chr2L 3152588 3152604 7 86 2.5 5.0 3.8 1.5 101 chr2L 3152503 intron Mad - chr2L 3152554 intron Mad - chr2L 3152604 intron Mad - chr2L_7_3150001 chr2L_3150001 RAL-83 55 chr2L 3192211 3192223 chr2L 3192322 3192326 5 108 5.0 6.5 5.8 0.7 115 chr2L 3192211 exon CG34393 - chr2L 3192268 intron CG34393 - chr2L 3192326 intron CG34393 - chr2L_5_3190001 chr2L_3190001 RAL-83 56 chr2L 3251501 3251526 chr2L 3259065 3259091 springer 5 7565 1.0 6.0 3.5 1.1 7590 chr2L 3251501 intergenic not near genes chr2L 3255296 intergenic not near genes chr2L 3259091 intergenic not near genes chr2L_5_3255001 chr2L_3255001 RAL-83 57 chr2L 3291245 3291266 chr2L 3291325 3291346 9 80 1.0 5.5 3.2 2.1 101 chr2L 3291245 3` UTR CG9664 - chr2L 3291296 3` UTR CG9664 - chr2L 3291346 3` UTR CG9664 - chr2L_9_3290001 chr2L_3290001 RAL-83 58 chr2L 3367011 3367043 chr2L 3367161 3367193 11 150 1.0 3.5 2.2 3.4 182 chr2L 3367011 intron CG34394 - chr2L 3367102 intron CG34394 - chr2L 3367193 intron CG34394 - chr2L_11_3365001 chr2L_3365001 RAL-83 59 chr2L 3497840 3497863 chr2L 3497917 3497939 7 77 2.5 1.5 2.0 2.3 99 chr2L 3497840 intron tim - chr2L 3497890 intron tim - chr2L 3497939 intron tim - chr2L_7_3495001 chr2L_3495001 RAL-83 60 chr2L 3508346 3508371 chr2L 3508424 3508449 6 78 3.0 2.0 2.5 1.7 103 chr2L 3508346 intergenic tim -,CR45299 + chr2L 3508398 intergenic CR45299 +,tim - chr2L 3508449 intergenic CR45299 +,tim - chr2L_6_3505001 chr2L_3505001 RAL-83 61 chr2L 3649790 3649807 chr2L 3654992 3655009 copia 5 5202 0.0 3.0 1.5 2.0 5219 chr2L 3649790 intron for - chr2L 3652400 intron for - chr2L 3655009 intron for - chr2L_5_3650001 chr2L_3650001 RAL-83 62 chr2L 3667973 3668062 chr2L 3668051 3668138 4 77 0.0 0.0 0.0 4.0 165 chr2L 3667973 intron CG34340 + chr2L 3668056 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668138 intron,exon CG34340 +,Sfp24Ba - chr2L_4_3665001 chr2L_3665001 RAL-83 63 chr2L 3707562 3707584 chr2L 3707646 3707668 4 84 3.0 3.0 3.0 1.0 106 chr2L 3707562 exon cutlet - chr2L 3707615 intron cutlet - chr2L 3707668 intron cutlet - chr2L_4_3705001 chr2L_3705001 RAL-83 64 chr2L 3785483 3785499 chr2L 3785558 3785575 7 76 20.0 10.5 15.2 0.4 92 chr2L 3785483 3` UTR CG31960 + chr2L 3785529 3` UTR CG31960 + chr2L 3785575 3` UTR CG31960 + chr2L_7_3785001 chr2L_3785001 RAL-83 65 chr2L 3819031 3819062 chr2L 3819113 3819144 7 79 1.0 0.0 0.5 4.7 113 chr2L 3819031 intergenic CR44077 + chr2L 3819088 intergenic not near genes chr2L 3819144 intergenic not near genes chr2L_7_3815001 chr2L_3815001 RAL-83 66 chr2L 3847081 3847112 chr2L 3847202 3847233 13 120 2.0 2.0 2.0 4.3 152 chr2L 3847081 intergenic not near genes chr2L 3847157 intergenic not near genes chr2L 3847233 intergenic not near genes chr2L_13_3845001 chr2L_3845001 RAL-83 67 chr2L 4035359 4035383 chr2L 4035439 4035443 7 77 3.0 1.5 2.2 2.2 84 chr2L 4035359 intron ed + chr2L 4035401 intron ed + chr2L 4035443 intron ed + chr2L_7_4035001 chr2L_4035001 RAL-83 68 chr2L 4037800 4037809 chr2L 4037887 4037896 4 87 3.0 2.0 2.5 1.1 96 chr2L 4037800 intron ed + chr2L 4037848 intron ed + chr2L 4037896 intron ed + chr2L_4_4035001 chr2L_4035001 RAL-83 69 chr2L 4066042 4066051 chr2L 4068865 4068875 Juan 4 2824 6.5 4.5 5.5 0.6 2833 chr2L 4066042 intron ed + chr2L 4067458 intron ed + chr2L 4068875 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-83 70 chr2L 4159409 4159441 chr2L 4159609 4159641 9 200 0.5 4.0 2.2 2.8 232 chr2L 4159409 intergenic not near genes chr2L 4159525 intergenic not near genes chr2L 4159641 intergenic not near genes chr2L_9_4155001 chr2L_4155001 RAL-83 71 chr2L 4184496 4184509 chr2L 4184814 4184828 4 318 0.0 1.0 0.5 2.7 332 chr2L 4184496 intergenic not near genes chr2L 4184662 intergenic not near genes chr2L 4184828 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-83 72 chr2L 4351492 4351500 chr2L 4351556 4351576 4 71 2.5 3.5 3.0 1.0 84 chr2L 4351492 intergenic CR44700 + chr2L 4351534 intergenic CR44700 + chr2L 4351576 intergenic CR44700 + chr2L_4_4350001 chr2L_4350001 RAL-83 73 chr2L 4584317 4584332 chr2L 4584465 4584478 4 144 6.0 1.0 3.5 0.9 161 chr2L 4584317 intron dp - chr2L 4584398 intron dp - chr2L 4584478 intron dp - chr2L_4_4580001 chr2L_4580001 RAL-83 74 chr2L 4601706 4601736 chr2L 4609147 4609177 mdg1 12 7440 6.0 7.5 6.8 1.5 7471 chr2L 4601706 intron dp - chr2L 4605442 intron dp - chr2L 4609177 intron dp - chr2L_12_4605001 chr2L_4605001 RAL-83 75 chr2L 4693009 4693016 chr2L 4693069 4693082 6 69 3.0 6.0 4.5 1.1 73 chr2L 4693009 intergenic not near genes chr2L 4693046 intergenic not near genes chr2L 4693082 intergenic not near genes chr2L_6_4690001 chr2L_4690001 RAL-83 76 chr2L 4701837 4701867 chr2L 4701979 4702009 8 141 3.0 2.5 2.8 2.1 172 chr2L 4701837 intron CG34351 + chr2L 4701923 intron CG34351 + chr2L 4702009 intron CG34351 + chr2L_8_4700001 chr2L_4700001 RAL-83 77 chr2L 4803887 4803910 chr2L 4803971 4803992 7 81 1.5 2.5 2.0 2.3 105 chr2L 4803887 intergenic not near genes chr2L 4803940 intergenic not near genes chr2L 4803992 intergenic not near genes chr2L_7_4800001 chr2L_4800001 RAL-83 78 chr2L 4918168 4918196 chr2L 4923241 4923269 jockey 9 5073 3.0 1.5 2.2 2.8 5101 chr2L 4918168 intron hoe1 - chr2L 4920718 intron hoe1 - chr2L 4923269 intron hoe1 - chr2L_9_4920001 chr2L_4920001 RAL-83 79 chr2L 5025137 5025152 chr2L 5025213 5025219 4 74 2.5 0.0 1.2 1.8 82 chr2L 5025137 intron vkg - chr2L 5025178 intron vkg - chr2L 5025219 intron vkg - chr2L_4_5025001 chr2L_5025001 RAL-83 80 chr2L 5040684 5040704 chr2L 5040780 5040794 4 94 2.0 1.0 1.5 1.6 110 chr2L 5040684 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040739 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040794 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L_4_5040001 chr2L_5040001 RAL-83 81 chr2L 5120975 5121004 chr2L 5121069 5121096 8 92 1.0 3.5 2.2 2.5 121 chr2L 5120975 intron Msp300 + chr2L 5121036 intron Msp300 + chr2L 5121096 intron Msp300 + chr2L_8_5120001 chr2L_5120001 RAL-83 82 chr2L 5265539 5265543 chr2L 5269991 5269996 4 4453 29.5 19.5 24.5 0.2 4457 chr2L 5265539 intron,exon tkv -,Cyp4ac1 + chr2L 5267768 intron,exon tkv -,Cyp4ac2 + chr2L 5269996 intron,exon tkv -,Cyp4ac3 + chr2L_4_5265001 chr2L_5265001 RAL-83 83 chr2L 5475155 5475164 chr2L 5475260 5475269 4 105 1.5 1.5 1.5 1.6 114 chr2L 5475155 intergenic not near genes chr2L 5475212 intergenic not near genes chr2L 5475269 intergenic not near genes chr2L_4_5475001 chr2L_5475001 RAL-83 84 chr2L 5676980 5677006 chr2L 5677063 5677089 5 82 1.5 0.5 1.0 2.5 109 chr2L 5676980 intergenic not near genes chr2L 5677034 intergenic not near genes chr2L 5677089 intergenic not near genes chr2L_5_5675001 chr2L_5675001 RAL-83 85 chr2L 5695861 5695892 chr2L 5695953 5695962 5 88 1.0 2.0 1.5 2.0 101 chr2L 5695861 intergenic not near genes chr2L 5695912 intergenic not near genes chr2L 5695962 intergenic not near genes chr2L_5_5695001 chr2L_5695001 RAL-83 86 chr2L 5813662 5813687 chr2L 5813767 5813787 5 104 3.5 4.5 4.0 1.0 125 chr2L 5813662 intergenic not near genes chr2L 5813724 intergenic not near genes chr2L 5813787 intergenic not near genes chr2L_5_5810001 chr2L_5810001 RAL-83 87 chr2L 5827713 5827731 chr2L 5836721 5836739 roo 6 9008 5.5 4.0 4.8 1.0 9026 chr2L 5827713 intron TrissinR + chr2L 5832226 intron TrissinR + chr2L 5836739 intron TrissinR + chr2L_6_5830001 chr2L_5830001 RAL-83 88 chr2L 5944551 5944558 chr2L 5948993 5949018 8 4445 22.0 10.5 16.2 0.5 4467 chr2L 5944551 intron Gpdh + chr2L 5946784 intron Gpdh + chr2L 5949018 intergenic Gpdh +,CG9044 + chr2L_8_5945001 chr2L_5945001 RAL-83 89 chr2L 6015149 6015161 chr2L 6015241 6015255 5 92 2.5 4.5 3.5 1.1 106 chr2L 6015149 intron H2.0 - chr2L 6015202 intron H2.0 - chr2L 6015255 intron H2.0 - chr2L_5_6015001 chr2L_6015001 RAL-83 90 chr2L 6296405 6296438 chr2L 6296498 6296531 10 93 2.0 5.0 3.5 2.2 126 chr2L 6296405 intron Ddr + chr2L 6296468 intron Ddr + chr2L 6296531 intron Ddr + chr2L_10_6295001 chr2L_6295001 RAL-83 91 chr2L 6426854 6426887 chr2L 6445114 6445147 roo 6 18258 4.5 5.5 5.0 1.0 18293 chr2L 6426854 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445147 exon CG9527 - chr2L_6_6435001 chr2L_6435001 RAL-83 92 chr2L 6544371 6544394 chr2L 6544463 6544486 8 92 1.5 4.5 3.0 2.0 115 chr2L 6544371 intron eya - chr2L 6544428 intron eya - chr2L 6544486 intron eya - chr2L_8_6540001 chr2L_6540001 RAL-83 93 chr2L 6564866 6564878 chr2L 6564951 6564971 4 84 2.0 0.5 1.2 1.8 105 chr2L 6564866 3` UTR CG13766 - chr2L 6564918 3` UTR CG13766 - chr2L 6564971 3` UTR CG13766 - chr2L_4_6560001 chr2L_6560001 RAL-83 94 chr2L 6590091 6590122 chr2L 6590168 6590169 10 74 5.5 4.5 5.0 1.7 78 chr2L 6590091 intron CG11319 - chr2L 6590130 intron CG11319 - chr2L 6590169 intron CG11319 - chr2L_10_6590001 chr2L_6590001 RAL-83 95 chr2L 6598120 6598150 chr2L 6599076 6599107 13 952 5.5 4.0 4.8 2.2 987 chr2L 6598120 intron CG11319 - chr2L 6598614 intron CG11319 - chr2L 6599107 intron CG11319 - chr2L_13_6595001 chr2L_6595001 RAL-83 96 chr2L 6771984 6772020 chr2L 6772070 6772085 9 82 3.0 3.0 3.0 2.2 101 chr2L 6771984 intron CG11321 - chr2L 6772034 intron CG11321 - chr2L 6772085 intron CG11321 - chr2L_9_6770001 chr2L_6770001 RAL-83 97 chr2L 6850378 6850403 chr2L 6850461 6850486 7 83 5.0 4.5 4.8 1.2 108 chr2L 6850378 intergenic not near genes chr2L 6850432 intergenic not near genes chr2L 6850486 intergenic not near genes chr2L_7_6850001 chr2L_6850001 RAL-83 98 chr2L 6891449 6891467 chr2L 6891543 6891563 5 97 2.0 3.0 2.5 1.4 114 chr2L 6891449 intron Nlg2 + chr2L 6891506 intron Nlg2 + chr2L 6891563 intron Nlg2 + chr2L_5_6890001 chr2L_6890001 RAL-83 99 chr2L 7141355 7141369 chr2L 7141489 7141503 7 134 3.5 3.0 3.2 1.7 148 chr2L 7141355 intron Pvf3 - chr2L 7141429 intron Pvf3 - chr2L 7141503 intron Pvf3 - chr2L_7_7140001 chr2L_7140001 RAL-83 100 chr2L 7217237 7217242 chr2L 7217342 7217347 4 105 6.0 5.5 5.8 0.6 110 chr2L 7217237 intron CG13784 - chr2L 7217292 intron CG13784 - chr2L 7217347 intron CG13784 - chr2L_4_7215001 chr2L_7215001 RAL-83 101 chr2L 7217251 7217265 chr2L 7217341 7217370 9 103 2.5 5.0 3.8 1.9 119 chr2L 7217251 intron CG13784 - chr2L 7217310 intron CG13784 - chr2L 7217370 intron CG13784 - chr2L_9_7215001 chr2L_7215001 RAL-83 102 chr2L 7325915 7325951 chr2L 7325998 7326003 8 73 1.5 3.0 2.2 2.5 88 chr2L 7325915 intergenic not near genes chr2L 7325959 intergenic not near genes chr2L 7326003 intergenic not near genes chr2L_8_7325001 chr2L_7325001 RAL-83 103 chr2L 7340041 7340051 chr2L 7340120 7340130 4 79 0.0 5.0 2.5 1.1 89 chr2L 7340041 intron Wnt6 + chr2L 7340086 intron Wnt6 + chr2L 7340130 intron Wnt6 + chr2L_4_7340001 chr2L_7340001 RAL-83 104 chr2L 7343334 7343356 chr2L 7350439 7350470 roo 6 7108 7.0 5.0 6.0 0.9 7136 chr2L 7343334 intron Wnt6 + chr2L 7346902 intron Wnt6 + chr2L 7350470 intron Wnt6 + chr2L_6_7345001 chr2L_7345001 RAL-83 105 chr2L 7394545 7394553 chr2L 7394627 7394634 4 82 5.0 3.0 4.0 0.8 89 chr2L 7394545 intron CG5160 - chr2L 7394590 intron CG5160 - chr2L 7394634 intron CG5160 - chr2L_4_7390001 chr2L_7390001 RAL-83 106 chr2L 7555220 7555231 chr2L 7555297 7555307 5 77 0.5 2.0 1.2 2.3 87 chr2L 7555220 intron RapGAP1 - chr2L 7555264 intron RapGAP1 - chr2L 7555307 intron RapGAP1 - chr2L_5_7555001 chr2L_7555001 RAL-83 107 chr2L 7750058 7750067 chr2L 7750123 7750150 6 80 3.5 7.0 5.2 1.0 92 chr2L 7750058 intergenic not near genes chr2L 7750104 intergenic not near genes chr2L 7750150 intergenic not near genes chr2L_6_7750001 chr2L_7750001 RAL-83 108 chr2L 7766633 7766648 chr2L 7766709 7766724 4 74 8.5 0.5 4.5 0.7 91 chr2L 7766633 intergenic not near genes chr2L 7766678 intergenic not near genes chr2L 7766724 intergenic not near genes chr2L_4_7765001 chr2L_7765001 RAL-83 109 chr2L 7912187 7912216 chr2L 7912263 7912292 9 76 3.5 3.0 3.2 2.1 105 chr2L 7912187 intron Snoo - chr2L 7912240 intron Snoo - chr2L 7912292 intron Snoo - chr2L_9_7910001 chr2L_7910001 RAL-83 110 chr2L 7921102 7921119 chr2L 7921185 7921206 7 84 2.0 5.0 3.5 1.6 104 chr2L 7921102 intron Snoo - chr2L 7921154 intron Snoo - chr2L 7921206 intron Snoo - chr2L_7_7920001 chr2L_7920001 RAL-83 111 chr2L 7922742 7922773 chr2L 7922823 7922852 12 80 5.0 2.5 3.8 2.5 110 chr2L 7922742 intron Snoo - chr2L 7922797 intron Snoo - chr2L 7922852 intron Snoo - chr2L_12_7920001 chr2L_7920001 RAL-83 112 chr2L 7959041 7959072 chr2L 7960451 7960472 pogo 11 1409 3.5 0.0 1.8 3.9 1431 chr2L 7959041 intron Snoo - chr2L 7959756 intron Snoo - chr2L 7960472 intron Snoo - chr2L_11_7955001 chr2L_7955001 RAL-83 113 chr2L 7973226 7973259 chr2L 7973323 7973354 6 96 0.5 1.5 1.0 3.0 128 chr2L 7973226 intron Snoo - chr2L 7973290 intron Snoo - chr2L 7973354 intron Snoo - chr2L_6_7970001 chr2L_7970001 RAL-83 114 chr2L 7977092 7977107 chr2L 7984066 7984083 297 8 6976 5.0 4.5 4.8 1.4 6991 chr2L 7977092 intron Snoo - chr2L 7980588 intron Snoo - chr2L 7984083 intron,5` UTR Snoo -,CG7231 + chr2L_8_7980001 chr2L_7980001 RAL-83 115 chr2L 8128044 8128059 chr2L 8128117 8128142 5 78 1.5 2.0 1.8 1.8 98 chr2L 8128044 intron CG8668 + chr2L 8128093 intron CG8668 + chr2L 8128142 intron CG8668 + chr2L_5_8125001 chr2L_8125001 RAL-83 116 chr2L 8167143 8167178 chr2L 8167234 8167244 9 84 1.5 6.5 4.0 1.8 101 chr2L 8167143 intron Piezo + chr2L 8167194 intron Piezo + chr2L 8167244 intron Piezo + chr2L_9_8165001 chr2L_8165001 RAL-83 117 chr2L 8167711 8167742 chr2L 8167788 8167821 16 78 5.0 3.5 4.2 3.1 110 chr2L 8167711 intron Piezo + chr2L 8167766 intron Piezo + chr2L 8167821 intron Piezo + chr2L_16_8165001 chr2L_8165001 RAL-83 118 chr2L 8184926 8184953 chr2L 8185016 8185044 8 91 0.5 2.5 1.5 3.2 118 chr2L 8184926 intron Piezo + chr2L 8184985 intron Piezo + chr2L 8185044 intron Piezo + chr2L_8_8180001 chr2L_8180001 RAL-83 119 chr2L 8244734 8244738 chr2L 8244854 8244859 4 121 1.5 5.0 3.2 1.0 125 chr2L 8244734 intron CG8086 - chr2L 8244796 intron CG8086 - chr2L 8244859 intron CG8086 - chr2L_4_8240001 chr2L_8240001 RAL-83 120 chr2L 8336854 8336965 chr2L 8336936 8337028 5 76 0.0 0.0 0.0 5.0 174 chr2L 8336854 intergenic not near genes chr2L 8336941 intergenic not near genes chr2L 8337028 intergenic not near genes chr2L_5_8335001 chr2L_8335001 RAL-83 121 chr2L 8502676 8502687 chr2L 8502758 8502771 4 83 5.5 4.5 5.0 0.7 95 chr2L 8502676 intron Dh31 - chr2L 8502724 intron Dh31 - chr2L 8502771 intron Dh31 - chr2L_4_8500001 chr2L_8500001 RAL-83 122 chr2L 8637400 8637435 chr2L 8637499 8637533 14 96 2.5 1.0 1.8 5.0 133 chr2L 8637400 intron Sema-1a + chr2L 8637466 intron Sema-1a + chr2L 8637533 intron Sema-1a + chr2L_14_8635001 chr2L_8635001 RAL-83 123 chr2L 8723114 8723148 chr2L 8731491 8731524 Tirant 8 8376 1.5 5.0 3.2 1.9 8410 chr2L 8723114 intron raw - chr2L 8727319 intron raw - chr2L 8731524 intron raw - chr2L_8_8725001 chr2L_8725001 RAL-83 124 chr2L 8788764 8788781 chr2L 8788855 8788855 6 87 0.5 0.5 0.5 4.0 91 chr2L 8788764 intergenic not near genes chr2L 8788810 intergenic not near genes chr2L 8788855 intergenic not near genes chr2L_6_8785001 chr2L_8785001 RAL-83 125 chr2L 8799800 8799830 chr2L 8799916 8799946 8 114 1.0 3.5 2.2 2.5 146 chr2L 8799800 intergenic not near genes chr2L 8799873 intergenic not near genes chr2L 8799946 intergenic not near genes chr2L_8_8795001 chr2L_8795001 RAL-83 126 chr2L 8910728 8910740 chr2L 8910819 8910831 6 90 6.5 0.5 3.5 1.3 103 chr2L 8910728 intron CG34398 + chr2L 8910780 intron CG34398 + chr2L 8910831 intron CG34398 + chr2L_6_8910001 chr2L_8910001 RAL-83 127 chr2L 9000280 9000313 chr2L 9007790 9007823 roo 5 7509 1.0 0.5 0.8 2.8 7543 chr2L 9000280 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007823 intergenic not near genes chr2L_5_9000001 chr2L_9000001 RAL-83 128 chr2L 9039153 9039388 chr2L 9039231 9039464 7 73 1.0 1.0 1.0 3.5 311 chr2L 9039153 intergenic not near genes chr2L 9039308 intergenic not near genes chr2L 9039464 intergenic not near genes chr2L_7_9035001 chr2L_9035001 RAL-83 129 chr2L 9081536 9081551 chr2L 9081606 9081627 8 73 4.5 5.0 4.8 1.4 91 chr2L 9081536 intergenic not near genes chr2L 9081582 intergenic not near genes chr2L 9081627 intergenic not near genes chr2L_8_9080001 chr2L_9080001 RAL-83 130 chr2L 9106653 9106669 chr2L 9106729 9106745 8 74 3.0 3.0 3.0 2.0 92 chr2L 9106653 intergenic not near genes chr2L 9106699 intergenic not near genes chr2L 9106745 intergenic not near genes chr2L_8_9105001 chr2L_9105001 RAL-83 131 chr2L 9217971 9217996 chr2L 9222758 9222764 Doc 4 4782 3.5 2.5 3.0 1.0 4793 chr2L 9217971 intron tai + chr2L 9220368 intron tai + chr2L 9222764 intron tai + chr2L_4_9220001 chr2L_9220001 RAL-83 132 chr2L 9280008 9280015 chr2L 9280089 9280109 4 91 0.5 1.5 1.0 2.0 101 chr2L 9280008 intron Ggamma30A + chr2L 9280058 intron Ggamma30A + chr2L 9280109 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 RAL-83 133 chr2L 9285035 9285045 chr2L 9285102 9285120 5 74 2.5 5.0 3.8 1.0 85 chr2L 9285035 intron Ggamma30A + chr2L 9285078 intron Ggamma30A + chr2L 9285120 intron Ggamma30A + chr2L_5_9285001 chr2L_9285001 RAL-83 134 chr2L 9287329 9287355 chr2L 9287426 9287452 9 97 1.5 2.0 1.8 3.2 123 chr2L 9287329 intron Ggamma30A + chr2L 9287390 intron Ggamma30A + chr2L 9287452 intron Ggamma30A + chr2L_9_9285001 chr2L_9285001 RAL-83 135 chr2L 9297383 9297405 chr2L 9297458 9297482 14 75 2.5 5.0 3.8 2.9 99 chr2L 9297383 3` UTR Ggamma30A + chr2L 9297432 3` UTR Ggamma30A + chr2L 9297482 3` UTR Ggamma30A + chr2L_14_9295001 chr2L_9295001 RAL-83 136 chr2L 9301108 9301138 chr2L 9309554 9309584 13 8446 36.0 24.0 30.0 0.4 8476 chr2L 9301108 3` UTR Ggamma30A + chr2L 9305346 intergenic CR42844 - chr2L 9309584 intergenic not near genes chr2L_13_9305001 chr2L_9305001 RAL-83 137 chr2L 9379446 9379476 chr2L 9379677 9379699 5 229 2.5 0.5 1.5 2.0 253 chr2L 9379446 intron Shawl - chr2L 9379572 intron Shawl - chr2L 9379699 intron Shawl - chr2L_5_9375001 chr2L_9375001 RAL-83 138 chr2L 9380245 9380249 chr2L 9380340 9380344 4 95 4.5 2.0 3.2 1.0 99 chr2L 9380245 exon Shawl - chr2L 9380294 intron Shawl - chr2L 9380344 intron Shawl - chr2L_4_9380001 chr2L_9380001 RAL-83 139 chr2L 9391534 9391550 chr2L 9391701 9391717 5 167 4.5 3.0 3.8 1.0 183 chr2L 9391534 intron,3` UTR Shawl -,Aldh + chr2L 9391626 intron Shawl - chr2L 9391717 intron Shawl - chr2L_5_9390001 chr2L_9390001 RAL-83 140 chr2L 9393501 9393531 chr2L 9396468 9396498 jockey 15 2966 5.0 4.5 4.8 2.6 2997 chr2L 9393501 intron Shawl - chr2L 9395000 intron Shawl - chr2L 9396498 intron Shawl - chr2L_15_9390001 chr2L_9390001 RAL-83 141 chr2L 9444763 9444784 chr2L 9444839 9444860 5 74 2.5 1.5 2.0 1.7 97 chr2L 9444763 intron numb + chr2L 9444812 intron numb + chr2L 9444860 intron numb + chr2L_5_9440001 chr2L_9440001 RAL-83 142 chr2L 9563830 9563857 chr2L 9564114 9564141 9 279 4.5 2.0 3.2 2.1 311 chr2L 9563830 intron jp - chr2L 9563986 intron jp - chr2L 9564141 intron jp - chr2L_9_9560001 chr2L_9560001 RAL-83 143 chr2L 9566594 9566626 chr2L 9566759 9566790 15 165 7.0 5.0 6.0 2.1 196 chr2L 9566594 5` UTR jp - chr2L 9566692 5` UTR jp - chr2L 9566790 intergenic jp - chr2L_15_9565001 chr2L_9565001 RAL-83 144 chr2L 9973726 9973759 chr2L 9980845 9980878 HMS-Beagle 12 7117 2.5 6.0 4.2 2.3 7152 chr2L 9973726 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980878 intergenic not near genes chr2L_12_9975001 chr2L_9975001 RAL-83 145 chr2L 9986353 9986382 chr2L 9986446 9986472 8 94 5.0 3.0 4.0 1.6 119 chr2L 9986353 intron bib + chr2L 9986412 intron bib + chr2L 9986472 intron bib + chr2L_8_9985001 chr2L_9985001 RAL-83 146 chr2L 10051727 10051753 chr2L 10051810 10051837 8 81 3.0 3.5 3.2 1.9 110 chr2L 10051727 5` UTR CR44874 + chr2L 10051782 5` UTR CR44874 + chr2L 10051837 5` UTR CR44874 + chr2L_8_10050001 chr2L_10050001 RAL-83 147 chr2L 10095637 10095662 chr2L 10095716 10095720 4 74 0.5 3.0 1.8 1.4 83 chr2L 10095637 intron CG44153 - chr2L 10095678 intron CG44153 - chr2L 10095720 intron CG44153 - chr2L_4_10095001 chr2L_10095001 RAL-83 148 chr2L 10156323 10156347 chr2L 10163790 10163817 blood 10 7469 4.0 4.0 4.0 2.0 7494 chr2L 10156323 intron,3` UTR CG44153 -,CG4839 + chr2L 10160070 intron CG44153 - chr2L 10163817 intron CG44153 - chr2L_10_10160001 chr2L_10160001 RAL-83 149 chr2L 10175896 10175930 chr2L 10175993 10176027 17 96 1.0 5.0 3.0 4.2 131 chr2L 10175896 intron CG44153 - chr2L 10175962 intron CG44153 - chr2L 10176027 intron CG44153 - chr2L_17_10175001 chr2L_10175001 RAL-83 150 chr2L 10278031 10278041 chr2L 10278105 10278121 4 77 0.5 0.5 0.5 2.7 90 chr2L 10278031 intron Utx - chr2L 10278076 intron Utx - chr2L 10278121 intron Utx - chr2L_4_10275001 chr2L_10275001 RAL-83 151 chr2L 10474389 10474412 chr2L 10474470 10474493 4 80 3.5 1.5 2.5 1.1 104 chr2L 10474389 intergenic RluA-1 - chr2L 10474441 intergenic RluA-1 - chr2L 10474493 intergenic RluA-1 - chr2L_4_10470001 chr2L_10470001 RAL-83 152 chr2L 10563911 10563948 chr2L 10564004 10564041 8 88 3.5 2.0 2.8 2.1 130 chr2L 10563911 intron Trim9 + chr2L 10563976 intron Trim9 + chr2L 10564041 intron Trim9 + chr2L_8_10560001 chr2L_10560001 RAL-83 153 chr2L 10631255 10631276 chr2L 10631346 10631367 5 91 3.0 0.0 1.5 2.0 112 chr2L 10631255 intron CG7329 - chr2L 10631311 intron CG7329 - chr2L 10631367 intron CG7329 - chr2L_5_10630001 chr2L_10630001 RAL-83 154 chr2L 10654739 10654764 chr2L 10654819 10654851 11 87 2.0 6.5 4.2 2.1 112 chr2L 10654739 intergenic CG17098 + chr2L 10654795 intergenic CG17098 + chr2L 10654851 intergenic CG17098 + chr2L_11_10650001 chr2L_10650001 RAL-83 155 chr2L 10850148 10850175 chr2L 10850243 10850270 9 94 6.5 7.5 7.0 1.1 122 chr2L 10850148 5` UTR,5` UTR porin -,CG43129 + chr2L 10850209 5` UTR,5` UTR porin -,CG43129 + chr2L 10850270 5` UTR,intron porin -,CG43129 + chr2L_9_10850001 chr2L_10850001 RAL-83 156 chr2L 10873051 10873055 chr2L 10873131 10873135 5 80 7.0 2.5 4.8 0.9 84 chr2L 10873051 intergenic not near genes chr2L 10873093 intergenic not near genes chr2L 10873135 intergenic not near genes chr2L_5_10870001 chr2L_10870001 RAL-83 157 chr2L 10873057 10873082 chr2L 10873128 10873156 4 73 0.5 2.5 1.5 1.6 99 chr2L 10873057 intergenic not near genes chr2L 10873106 intergenic not near genes chr2L 10873156 intergenic not near genes chr2L_4_10870001 chr2L_10870001 RAL-83 158 chr2L 10912985 10912997 chr2L 10913062 10913070 4 77 8.5 4.0 6.2 0.6 85 chr2L 10912985 intergenic not near genes chr2L 10913028 intergenic not near genes chr2L 10913070 intergenic not near genes chr2L_4_10910001 chr2L_10910001 RAL-83 159 chr2L 10919799 10919830 chr2L 10919888 10919919 8 88 3.5 3.0 3.2 1.9 120 chr2L 10919799 intron dpr2 - chr2L 10919859 intron dpr2 - chr2L 10919919 intron dpr2 - chr2L_8_10915001 chr2L_10915001 RAL-83 160 chr2L 10946965 10946976 chr2L 10956161 10956191 roo 9 9211 3.5 8.5 6.0 1.3 9226 chr2L 10946965 intron dpr2 - chr2L 10951578 intron dpr2 - chr2L 10956191 intron dpr2 - chr2L_9_10950001 chr2L_10950001 RAL-83 161 chr2L 11245256 11245270 chr2L 11245335 11245349 5 78 5.0 1.0 3.0 1.2 93 chr2L 11245256 intron ab + chr2L 11245302 intron ab + chr2L 11245349 intron ab + chr2L_5_11245001 chr2L_11245001 RAL-83 162 chr2L 11379949 11379969 chr2L 11380031 11380035 4 78 3.0 0.0 1.5 1.6 86 chr2L 11379949 intergenic not near genes chr2L 11379992 intergenic not near genes chr2L 11380035 intergenic not near genes chr2L_4_11375001 chr2L_11375001 RAL-83 163 chr2L 11380622 11380642 chr2L 11380699 11380719 6 77 1.5 4.0 2.8 1.6 97 chr2L 11380622 intergenic not near genes chr2L 11380670 intergenic not near genes chr2L 11380719 intergenic not near genes chr2L_6_11380001 chr2L_11380001 RAL-83 164 chr2L 11521937 11521951 chr2L 11522004 11522007 8 74 3.0 2.0 2.5 2.3 70 chr2L 11521937 exon CG43153 - chr2L 11521972 exon CG43153 - chr2L 11522007 exon CG43153 - chr2L_8_11520001 chr2L_11520001 RAL-83 165 chr2L 11563646 11563668 chr2L 11568848 11568869 copia 5 5202 3.5 3.0 3.2 1.2 5223 chr2L 11563646 intergenic not near genes chr2L 11566258 intergenic not near genes chr2L 11568869 intergenic not near genes chr2L_5_11565001 chr2L_11565001 RAL-83 166 chr2L 11588846 11588874 chr2L 11588924 11588933 11 71 3.5 2.0 2.8 2.9 87 chr2L 11588846 intron,5` UTR kek2 +,CR44496 + chr2L 11588890 intron,5` UTR kek2 +,CR44496 + chr2L 11588933 intron,5` UTR kek2 +,CR44496 + chr2L_11_11585001 chr2L_11585001 RAL-83 167 chr2L 11702069 11702102 chr2L 11702145 11702178 9 75 2.0 4.5 3.2 2.1 109 chr2L 11702069 intergenic not near genes chr2L 11702124 intergenic not near genes chr2L 11702178 intergenic not near genes chr2L_9_11700001 chr2L_11700001 RAL-83 168 chr2L 11713515 11713540 chr2L 11720983 11721006 blood 8 7466 4.0 6.0 5.0 1.3 7491 chr2L 11713515 intergenic not near genes chr2L 11717260 intergenic not near genes chr2L 11721006 intergenic CR44143 + chr2L_8_11715001 chr2L_11715001 RAL-83 169 chr2L 11770600 11770632 chr2L 11770684 11770690 13 81 5.0 3.0 4.0 2.6 90 chr2L 11770600 intergenic not near genes chr2L 11770645 intergenic not near genes chr2L 11770690 intergenic not near genes chr2L_13_11770001 chr2L_11770001 RAL-83 170 chr2L 11781044 11781194 chr2L 11781128 11781270 6 78 0.0 0.0 0.0 6.0 226 chr2L 11781044 intergenic not near genes chr2L 11781157 intergenic not near genes chr2L 11781270 intergenic not near genes chr2L_6_11780001 chr2L_11780001 RAL-83 171 chr2L 11820432 11820456 chr2L 11820513 11820537 8 81 1.0 3.5 2.2 2.5 105 chr2L 11820432 intron Pde1c - chr2L 11820484 intron Pde1c - chr2L 11820537 intron Pde1c - chr2L_8_11820001 chr2L_11820001 RAL-83 172 chr2L 11890007 11890033 chr2L 11890079 11890094 4 70 2.5 0.5 1.5 1.6 87 chr2L 11890007 intron Pde1c - chr2L 11890050 intron Pde1c - chr2L 11890094 intron Pde1c - chr2L_4_11890001 chr2L_11890001 RAL-83 173 chr2L 12147788 12147799 chr2L 12147880 12147891 6 92 6.0 0.5 3.2 1.4 103 chr2L 12147788 intron CG31760 + chr2L 12147840 intron CG31760 + chr2L 12147891 intron CG31760 + chr2L_6_12145001 chr2L_12145001 RAL-83 174 chr2L 12254032 12254051 chr2L 12254123 12254143 4 92 4.0 0.5 2.2 1.2 111 chr2L 12254032 intron aret + chr2L 12254088 intron aret + chr2L 12254143 intron aret + chr2L_4_12250001 chr2L_12250001 RAL-83 175 chr2L 12305415 12305438 chr2L 12305503 12305521 13 87 1.5 4.5 3.0 3.2 106 chr2L 12305415 intron aret + chr2L 12305468 intron aret + chr2L 12305521 intron aret + chr2L_13_12305001 chr2L_12305001 RAL-83 176 chr2L 12338169 12338203 chr2L 12338387 12338421 10 217 4.0 3.5 3.8 2.1 252 chr2L 12338169 intergenic not near genes chr2L 12338295 intergenic not near genes chr2L 12338421 intergenic CG31862 + chr2L_10_12335001 chr2L_12335001 RAL-83 177 chr2L 12373160 12373170 chr2L 12373233 12373259 6 86 1.5 5.5 3.5 1.3 99 chr2L 12373160 intron bru-2 + chr2L 12373210 intron bru-2 + chr2L 12373259 intron bru-2 + chr2L_6_12370001 chr2L_12370001 RAL-83 178 chr2L 12411011 12411033 chr2L 12411088 12411112 4 78 2.0 0.0 1.0 2.0 101 chr2L 12411011 intron vir-1 - chr2L 12411062 intron vir-1 - chr2L 12411112 intron vir-1 - chr2L_4_12410001 chr2L_12410001 RAL-83 179 chr2L 12529248 12529445 chr2L 12529376 12529521 12 90 1.5 1.0 1.2 5.5 273 chr2L 12529248 intron bun - chr2L 12529384 intron bun - chr2L 12529521 intron bun - chr2L_12_12525001 chr2L_12525001 RAL-83 180 chr2L 12572493 12572515 chr2L 12572574 12572594 5 78 1.0 0.5 0.8 2.8 101 chr2L 12572493 intergenic not near genes chr2L 12572544 intergenic not near genes chr2L 12572594 intergenic not near genes chr2L_5_12570001 chr2L_12570001 RAL-83 181 chr2L 12572516 12572520 chr2L 12572573 12572598 4 70 1.0 0.5 0.8 2.2 82 chr2L 12572516 intergenic not near genes chr2L 12572557 intergenic not near genes chr2L 12572598 intergenic not near genes chr2L_4_12570001 chr2L_12570001 RAL-83 182 chr2L 12584372 12584395 chr2L 12584456 12584479 4 84 0.5 0.5 0.5 2.7 107 chr2L 12584372 intergenic not near genes chr2L 12584426 intergenic not near genes chr2L 12584479 intergenic not near genes chr2L_4_12580001 chr2L_12580001 RAL-83 183 chr2L 12682873 12682905 chr2L 12682952 12682982 17 78 4.0 3.0 3.5 3.8 109 chr2L 12682873 intron pdm2 + chr2L 12682928 intron pdm2 + chr2L 12682982 intron pdm2 + chr2L_17_12680001 chr2L_12680001 RAL-83 184 chr2L 12731065 12731086 chr2L 12735832 12735853 F-element 4 4767 3.0 5.0 4.0 0.8 4788 chr2L 12731065 intron MRP + chr2L 12733459 intron MRP + chr2L 12735853 intron MRP + chr2L_4_12730001 chr2L_12730001 RAL-83 185 chr2L 12739174 12739189 chr2L 12743955 12743968 Doc 4 4780 9.0 5.0 7.0 0.5 4794 chr2L 12739174 exon MRP + chr2L 12741571 intron MRP + chr2L 12743968 intron MRP + chr2L_4_12740001 chr2L_12740001 RAL-83 186 chr2L 12751310 12751340 chr2L 12751392 12751423 7 82 5.5 3.5 4.5 1.3 113 chr2L 12751310 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751423 intergenic not near genes chr2L_7_12750001 chr2L_12750001 RAL-83 187 chr2L 12861694 12861725 chr2L 12863161 12863192 hobo 14 1466 2.0 1.5 1.8 5.0 1498 chr2L 12861694 intergenic not near genes chr2L 12862443 intergenic not near genes chr2L 12863192 intergenic not near genes chr2L_14_12860001 chr2L_12860001 RAL-83 188 chr2L 12861726 12861731 chr2L 12863160 12863198 hobo 4 1455 1.5 1.5 1.5 1.6 1472 chr2L 12861726 intergenic not near genes chr2L 12862462 intergenic not near genes chr2L 12863198 intergenic not near genes chr2L_4_12860001 chr2L_12860001 RAL-83 189 chr2L 12894032 12894053 chr2L 12895485 12895491 hobo 5 1453 4.0 2.5 3.2 1.2 1459 chr2L 12894032 intergenic not near genes chr2L 12894762 intergenic not near genes chr2L 12895491 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-83 190 chr2L 12933851 12933883 chr2L 12941318 12941350 blood 9 7467 2.0 2.0 2.0 3.0 7499 chr2L 12933851 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941350 intergenic not near genes chr2L_9_12935001 chr2L_12935001 RAL-83 191 chr2L 12945976 12946005 chr2L 12946056 12946085 13 76 0.5 3.0 1.8 4.6 109 chr2L 12945976 intergenic not near genes chr2L 12946030 intergenic not near genes chr2L 12946085 intergenic not near genes chr2L_13_12945001 chr2L_12945001 RAL-83 192 chr2L 13077572 13077599 chr2L 13078166 13078193 10 594 3.0 3.5 3.2 2.4 621 chr2L 13077572 intergenic not near genes chr2L 13077882 intergenic not near genes chr2L 13078193 intergenic not near genes chr2L_10_13075001 chr2L_13075001 RAL-83 193 chr2L 13152235 13152260 chr2L 13152306 13152338 12 75 3.0 3.0 3.0 3.0 103 chr2L 13152235 intergenic not near genes chr2L 13152286 intergenic not near genes chr2L 13152338 intergenic not near genes chr2L_12_13150001 chr2L_13150001 RAL-83 194 chr2L 13405647 13405671 chr2L 13410444 13410468 Doc 8 4797 4.5 2.5 3.5 1.8 4821 chr2L 13405647 exon CG7110 + chr2L 13408058 intron CG7110 + chr2L 13410468 intron CG7110 + chr2L_8_13405001 chr2L_13405001 RAL-83 195 chr2L 13481451 13481481 chr2L 13482058 13482072 jockey 7 604 3.0 5.0 4.0 1.4 621 chr2L 13481451 intron CG42784 + chr2L 13481762 intron CG42784 + chr2L 13482072 intron CG42784 + chr2L_7_13480001 chr2L_13480001 RAL-83 196 chr2L 13565330 13565352 chr2L 13565562 13565584 8 232 2.0 3.5 2.8 2.1 254 chr2L 13565330 intron kuz + chr2L 13565457 intron kuz + chr2L 13565584 intron kuz + chr2L_8_13565001 chr2L_13565001 RAL-83 197 chr2L 13622135 13622170 chr2L 13622234 13622238 12 92 3.0 2.5 2.8 3.2 103 chr2L 13622135 intron kuz + chr2L 13622186 intron kuz + chr2L 13622238 intron kuz + chr2L_12_13620001 chr2L_13620001 RAL-83 198 chr2L 13684274 13684288 chr2L 13684350 13684364 4 76 0.0 4.5 2.2 1.2 90 chr2L 13684274 intron CG31814 - chr2L 13684319 intron CG31814 - chr2L 13684364 intron CG31814 - chr2L_4_13680001 chr2L_13680001 RAL-83 199 chr2L 13696687 13696723 chr2L 13696773 13696809 7 86 0.5 3.0 1.8 2.5 122 chr2L 13696687 intron CG31814 - chr2L 13696748 intron CG31814 - chr2L 13696809 intron CG31814 - chr2L_7_13695001 chr2L_13695001 RAL-83 200 chr2L 13699561 13699585 chr2L 13699638 13699662 15 76 2.0 7.5 4.8 2.6 101 chr2L 13699561 intron CG31814 - chr2L 13699612 intron CG31814 - chr2L 13699662 intron CG31814 - chr2L_15_13695001 chr2L_13695001 RAL-83 201 chr2L 13752804 13752829 chr2L 13752922 13752947 11 117 1.5 4.5 3.0 2.8 143 chr2L 13752804 intron,intron CR44846 +,TM9SF4 + chr2L 13752876 intron,intron CR44846 +,TM9SF4 + chr2L 13752947 intron,intron CR44846 +,TM9SF4 + chr2L_11_13750001 chr2L_13750001 RAL-83 202 chr2L 13761804 13761821 chr2L 13762915 13762931 Doc 5 1111 5.0 5.0 5.0 0.8 1127 chr2L 13761804 intron TM9SF4 + chr2L 13762368 intron TM9SF4 + chr2L 13762931 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-83 203 chr2L 13853087 13853114 chr2L 13862237 13862263 roo 6 9148 2.5 2.0 2.2 1.9 9176 chr2L 13853087 intron CenG1A + chr2L 13857675 intron CenG1A + chr2L 13862263 intron CenG1A + chr2L_6_13855001 chr2L_13855001 RAL-83 204 chr2L 13944409 13944429 chr2L 13944529 13944549 5 120 0.0 0.0 0.0 5.0 140 chr2L 13944409 intron Ance-3 + chr2L 13944479 intron Ance-3 + chr2L 13944549 intron Ance-3 + chr2L_5_13940001 chr2L_13940001 RAL-83 205 chr2L 14112744 14112768 chr2L 14112835 14112858 4 91 2.0 1.0 1.5 1.6 114 chr2L 14112744 intergenic not near genes chr2L 14112801 intergenic not near genes chr2L 14112858 intergenic not near genes chr2L_4_14110001 chr2L_14110001 RAL-83 206 chr2L 14315817 14315841 chr2L 14315903 14315927 5 86 1.0 2.5 1.8 1.8 110 chr2L 14315817 intron wb + chr2L 14315872 intron wb + chr2L 14315927 intron wb + chr2L_5_14315001 chr2L_14315001 RAL-83 207 chr2L 14367822 14367835 chr2L 14367949 14367962 6 126 6.0 1.0 3.5 1.3 140 chr2L 14367822 intergenic not near genes chr2L 14367892 intergenic not near genes chr2L 14367962 intergenic not near genes chr2L_6_14365001 chr2L_14365001 RAL-83 208 chr2L 14367836 14367844 chr2L 14367948 14367960 4 120 2.5 1.0 1.8 1.4 124 chr2L 14367836 intergenic not near genes chr2L 14367898 intergenic not near genes chr2L 14367960 intergenic not near genes chr2L_4_14365001 chr2L_14365001 RAL-83 209 chr2L 14412510 14412538 chr2L 14412588 14412616 9 76 3.5 5.5 4.5 1.6 106 chr2L 14412510 intergenic not near genes chr2L 14412563 intergenic not near genes chr2L 14412616 intergenic not near genes chr2L_9_14410001 chr2L_14410001 RAL-83 210 chr2L 14462730 14462735 chr2L 14462817 14462822 4 87 1.0 0.0 0.5 2.7 92 chr2L 14462730 intergenic not near genes chr2L 14462776 intergenic not near genes chr2L 14462822 intergenic not near genes chr2L_4_14460001 chr2L_14460001 RAL-83 211 chr2L 14472046 14472056 chr2L 14472119 14472131 4 75 3.5 1.0 2.2 1.2 85 chr2L 14472046 intergenic not near genes chr2L 14472088 intergenic not near genes chr2L 14472131 intergenic not near genes chr2L_4_14470001 chr2L_14470001 RAL-83 212 chr2L 14508136 14508170 chr2L 14508225 14508259 12 86 3.0 4.0 3.5 2.7 123 chr2L 14508136 intergenic not near genes chr2L 14508198 intergenic not near genes chr2L 14508259 intergenic not near genes chr2L_12_14505001 chr2L_14505001 RAL-83 213 chr2L 14562321 14562349 chr2L 14562407 14562435 8 86 2.5 4.0 3.2 1.9 114 chr2L 14562321 intergenic not near genes chr2L 14562378 intergenic not near genes chr2L 14562435 intergenic not near genes chr2L_8_14560001 chr2L_14560001 RAL-83 214 chr2L 14586202 14586218 chr2L 14586280 14586297 7 73 4.0 3.5 3.8 1.5 95 chr2L 14586202 intergenic not near genes chr2L 14586250 intergenic not near genes chr2L 14586297 intergenic not near genes chr2L_7_14585001 chr2L_14585001 RAL-83 215 chr2L 14586220 14586230 chr2L 14586277 14586301 6 66 1.5 2.5 2.0 2.0 81 chr2L 14586220 intergenic not near genes chr2L 14586260 intergenic not near genes chr2L 14586301 intergenic not near genes chr2L_6_14585001 chr2L_14585001 RAL-83 216 chr2L 14588382 14588416 chr2L 14588536 14588564 8 153 2.0 2.5 2.2 2.5 182 chr2L 14588382 intergenic CG42680 - chr2L 14588473 intergenic CG42680 - chr2L 14588564 intergenic CG42680 - chr2L_8_14585001 chr2L_14585001 RAL-83 217 chr2L 14642580 14642600 chr2L 14651733 14651763 roo 12 9162 1.5 3.5 2.5 3.4 9183 chr2L 14642580 intron osp - chr2L 14647172 intron osp - chr2L 14651763 intron osp - chr2L_12_14645001 chr2L_14645001 RAL-83 218 chr2L 14661263 14661276 chr2L 14661365 14661384 5 109 1.0 2.0 1.5 2.0 121 chr2L 14661263 intron osp - chr2L 14661324 intron osp - chr2L 14661384 intron osp - chr2L_5_14660001 chr2L_14660001 RAL-83 219 chr2L 14705501 14705511 chr2L 14705567 14705594 6 77 3.0 4.0 3.5 1.3 93 chr2L 14705501 intergenic not near genes chr2L 14705548 intergenic not near genes chr2L 14705594 intergenic not near genes chr2L_6_14705001 chr2L_14705001 RAL-83 220 chr2L 14715535 14715567 chr2L 14715626 14715658 6 91 1.5 1.0 1.2 2.7 123 chr2L 14715535 intergenic not near genes chr2L 14715596 intergenic not near genes chr2L 14715658 intergenic not near genes chr2L_6_14715001 chr2L_14715001 RAL-83 221 chr2L 14778820 14778837 chr2L 14779107 14779122 4 286 4.0 10.5 7.2 0.5 302 chr2L 14778820 intergenic not near genes chr2L 14778971 intergenic not near genes chr2L 14779122 intergenic not near genes chr2L_4_14775001 chr2L_14775001 RAL-83 222 chr2L 14803879 14803912 chr2L 14809082 14809115 copia 15 5202 2.5 5.0 3.8 3.1 5236 chr2L 14803879 intergenic not near genes chr2L 14806497 intergenic not near genes chr2L 14809115 intergenic not near genes chr2L_15_14805001 chr2L_14805001 RAL-83 223 chr2L 14840983 14841010 chr2L 14841070 14841097 4 87 1.0 3.5 2.2 1.2 114 chr2L 14840983 3` UTR CR43805 - chr2L 14841040 3` UTR CR43805 - chr2L 14841097 3` UTR CR43805 - chr2L_4_14840001 chr2L_14840001 RAL-83 224 chr2L 14889953 14889985 chr2L 14890378 14890410 jockey 9 424 3.0 4.0 3.5 2.0 457 chr2L 14889953 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890410 intergenic not near genes chr2L_9_14890001 chr2L_14890001 RAL-83 225 chr2L 15021444 15021467 chr2L 15021520 15021542 7 74 1.5 2.0 1.8 2.5 98 chr2L 15021444 intron GABA-B-R1 + chr2L 15021493 intron GABA-B-R1 + chr2L 15021542 intron GABA-B-R1 + chr2L_7_15020001 chr2L_15020001 RAL-83 226 chr2L 15022904 15022937 chr2L 15023010 15023044 12 104 4.0 4.0 4.0 2.4 140 chr2L 15022904 intron GABA-B-R1 + chr2L 15022974 intron GABA-B-R1 + chr2L 15023044 intron GABA-B-R1 + chr2L_12_15020001 chr2L_15020001 RAL-83 227 chr2L 15044554 15044587 chr2L 15044783 15044816 4 228 2.0 1.0 1.5 1.6 262 chr2L 15044554 intergenic ck - chr2L 15044685 intergenic ck - chr2L 15044816 intergenic ck - chr2L_4_15040001 chr2L_15040001 RAL-83 228 chr2L 15077397 15077427 chr2L 15077487 15077515 11 87 4.0 6.0 5.0 1.8 118 chr2L 15077397 intron CG15270 + chr2L 15077456 intron CG15270 + chr2L 15077515 intron CG15270 + chr2L_11_15075001 chr2L_15075001 RAL-83 229 chr2L 15226377 15226396 chr2L 15226453 15226472 6 74 1.5 2.5 2.0 2.0 95 chr2L 15226377 intergenic not near genes chr2L 15226424 intergenic not near genes chr2L 15226472 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-83 230 chr2L 15244049 15244072 chr2L 15244161 15244185 7 113 0.5 1.0 0.8 3.9 136 chr2L 15244049 intron ZnT35C - chr2L 15244117 intron ZnT35C - chr2L 15244185 intron ZnT35C - chr2L_7_15240001 chr2L_15240001 RAL-83 231 chr2L 15296702 15296736 chr2L 15296800 15296835 10 95 2.0 0.5 1.2 4.5 133 chr2L 15296702 3` UTR CR43764 - chr2L 15296768 3` UTR CR43764 - chr2L 15296835 3` UTR CR43764 - chr2L_10_15295001 chr2L_15295001 RAL-83 232 chr2L 15309352 15309382 chr2L 15309454 15309485 13 103 1.0 2.0 1.5 5.2 133 chr2L 15309352 intergenic not near genes chr2L 15309418 intergenic not near genes chr2L 15309485 intergenic not near genes chr2L_13_15305001 chr2L_15305001 RAL-83 233 chr2L 15435693 15435721 chr2L 15435856 15435863 4 159 0.5 4.0 2.2 1.2 170 chr2L 15435693 intergenic CR44861 +,CG4161 + chr2L 15435778 5` UTR CR44861 + chr2L 15435863 5` UTR CR44861 + chr2L_4_15435001 chr2L_15435001 RAL-83 234 chr2L 15446053 15446084 chr2L 15453521 15453553 blood 5 7468 1.5 2.5 2.0 1.7 7500 chr2L 15446053 intergenic not near genes chr2L 15449803 intergenic not near genes chr2L 15453553 intergenic not near genes chr2L_5_15445001 chr2L_15445001 RAL-83 235 chr2L 15510939 15510964 chr2L 15511030 15511058 7 91 2.5 3.5 3.0 1.8 119 chr2L 15510939 intergenic not near genes chr2L 15510998 intergenic not near genes chr2L 15511058 intergenic not near genes chr2L_7_15510001 chr2L_15510001 RAL-83 236 chr2L 15535890 15535913 chr2L 15535979 15536003 7 87 2.5 5.5 4.0 1.4 113 chr2L 15535890 intergenic not near genes chr2L 15535946 intergenic not near genes chr2L 15536003 intergenic not near genes chr2L_7_15535001 chr2L_15535001 RAL-83 237 chr2L 15614926 15614943 chr2L 15615006 15615023 5 79 3.5 1.5 2.5 1.4 97 chr2L 15614926 intergenic CG15254 -,CG15253 - chr2L 15614974 intergenic CG15254 -,CG15253 - chr2L 15615023 intergenic CG15254 -,CG15253 - chr2L_5_15610001 chr2L_15610001 RAL-83 238 chr2L 15768674 15768674 chr2L 15769141 15769160 6 471 17.0 26.5 21.8 0.3 486 chr2L 15768674 3` UTR Ku80 - chr2L 15768917 exon Ku80 - chr2L 15769160 exon Ku80 - chr2L_6_15765001 chr2L_15765001 RAL-83 239 chr2L 15776546 15776570 chr2L 15776985 15777009 4 439 21.5 11.0 16.2 0.2 463 chr2L 15776546 exon CG43760 - chr2L 15776778 5` UTR CG43760 - chr2L 15777009 intergenic CG43760 - chr2L_4_15775001 chr2L_15775001 RAL-83 240 chr2L 15800422 15800453 chr2L 15800500 15800528 4 76 2.0 4.5 3.2 1.0 106 chr2L 15800422 intergenic not near genes chr2L 15800475 intergenic not near genes chr2L 15800528 intergenic not near genes chr2L_4_15800001 chr2L_15800001 RAL-83 241 chr2L 15819315 15819342 chr2L 15819390 15819418 4 74 4.5 1.5 3.0 1.0 103 chr2L 15819315 intergenic not near genes chr2L 15819366 intergenic not near genes chr2L 15819418 intergenic not near genes chr2L_4_15815001 chr2L_15815001 RAL-83 242 chr2L 15887721 15887733 chr2L 15887850 15887866 5 132 6.5 4.0 5.2 0.8 145 chr2L 15887721 intergenic not near genes chr2L 15887794 intergenic not near genes chr2L 15887866 intergenic not near genes chr2L_5_15885001 chr2L_15885001 RAL-83 243 chr2L 15906182 15906205 chr2L 15906271 15906294 10 88 1.5 3.5 2.5 2.9 112 chr2L 15906182 intron beat-Ib - chr2L 15906238 intron beat-Ib - chr2L 15906294 intron beat-Ib - chr2L_10_15905001 chr2L_15905001 RAL-83 244 chr2L 15947169 15947185 chr2L 15947234 15947267 11 76 4.0 4.5 4.2 2.1 98 chr2L 15947169 intron beat-Ib - chr2L 15947218 intron beat-Ib - chr2L 15947267 intron beat-Ib - chr2L_11_15945001 chr2L_15945001 RAL-83 245 chr2L 15956025 15956046 chr2L 15957489 15957512 hobo 7 1466 4.5 2.0 3.2 1.7 1487 chr2L 15956025 intron beat-Ib - chr2L 15956768 intron beat-Ib - chr2L 15957512 intron beat-Ib - chr2L_7_15955001 chr2L_15955001 RAL-83 246 chr2L 16058125 16058152 chr2L 16058266 16058275 6 138 1.5 1.5 1.5 2.4 150 chr2L 16058125 intron beat-Ia + chr2L 16058200 intron beat-Ia + chr2L 16058275 intron beat-Ia + chr2L_6_16055001 chr2L_16055001 RAL-83 247 chr2L 16141180 16141195 chr2L 16146370 16146402 copia 7 5202 3.0 2.0 2.5 2.0 5222 chr2L 16141180 intergenic not near genes chr2L 16143791 intergenic not near genes chr2L 16146402 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-83 248 chr2L 16153744 16153755 chr2L 16160812 16160823 297 4 7068 3.0 2.0 2.5 1.1 7079 chr2L 16153744 intergenic not near genes chr2L 16157284 intergenic not near genes chr2L 16160823 intergenic not near genes chr2L_4_16155001 chr2L_16155001 RAL-83 249 chr2L 9084339 9084340 chr2L 16217660 16217660 4 7133321 16.0 23.0 19.5 0.2 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-83 250 chr2L 16280256 16280281 chr2L 16281427 16281452 1360 4 1171 2.5 4.5 3.5 0.9 1196 chr2L 16280256 intron crp - chr2L 16280854 intron crp - chr2L 16281452 intron crp - chr2L_4_16280001 chr2L_16280001 RAL-83 251 chr2L 16435966 16435975 chr2L 16436048 16436056 4 81 2.5 4.5 3.5 0.9 90 chr2L 16435966 intron CG5888 - chr2L 16436011 intron CG5888 - chr2L 16436056 intron CG5888 - chr2L_4_16435001 chr2L_16435001 RAL-83 252 chr2L 16527270 16527300 chr2L 16527358 16527388 4 88 1.5 3.5 2.5 1.1 118 chr2L 16527270 intron CG5953 - chr2L 16527329 intron CG5953 - chr2L 16527388 intron CG5953 - chr2L_4_16525001 chr2L_16525001 RAL-83 253 chr2L 16544121 16544144 chr2L 16544199 16544222 4 78 5.0 2.0 3.5 0.9 101 chr2L 16544121 intergenic not near genes chr2L 16544172 intergenic not near genes chr2L 16544222 intergenic not near genes chr2L_4_16540001 chr2L_16540001 RAL-83 254 chr2L 16563182 16563195 chr2L 16563240 16563274 8 71 3.5 0.5 2.0 2.7 92 chr2L 16563182 intron CG42389 + chr2L 16563228 intron CG42389 + chr2L 16563274 intron CG42389 + chr2L_8_16560001 chr2L_16560001 RAL-83 255 chr2L 16572206 16572240 chr2L 16572299 16572333 5 93 2.5 2.5 2.5 1.4 127 chr2L 16572206 intron CG42389 + chr2L 16572270 intron CG42389 + chr2L 16572333 intron CG42389 + chr2L_5_16570001 chr2L_16570001 RAL-83 256 chr2L 16927732 16927756 chr2L 16927815 16927843 7 86 3.0 4.0 3.5 1.6 111 chr2L 16927732 intergenic not near genes chr2L 16927788 intergenic not near genes chr2L 16927843 intergenic not near genes chr2L_7_16925001 chr2L_16925001 RAL-83 257 chr2L 16968241 16968264 chr2L 16968331 16968353 5 87 1.5 1.0 1.2 2.3 112 chr2L 16968241 intergenic not near genes chr2L 16968297 intergenic not near genes chr2L 16968353 intergenic not near genes chr2L_5_16965001 chr2L_16965001 RAL-83 258 chr2L 17087383 17087404 chr2L 17087501 17087522 5 117 1.5 1.5 1.5 2.0 139 chr2L 17087383 intergenic CG12620 + chr2L 17087452 intergenic CG12620 + chr2L 17087522 intergenic CG12620 + chr2L_5_17085001 chr2L_17085001 RAL-83 259 chr2L 17088855 17088877 chr2L 17088938 17088961 6 84 1.5 4.5 3.0 1.5 106 chr2L 17088855 3` UTR CG12620 + chr2L 17088908 3` UTR CG12620 + chr2L 17088961 3` UTR CG12620 + chr2L_6_17085001 chr2L_17085001 RAL-83 260 chr2L 17158728 17158755 chr2L 17158831 17158857 8 103 2.0 3.5 2.8 2.1 129 chr2L 17158728 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158792 intron,intron CG34106 +,beat-IIIa + chr2L 17158857 intron,intron CG34106 +,beat-IIIa + chr2L_8_17155001 chr2L_17155001 RAL-83 261 chr2L 17181445 17181476 chr2L 17181529 17181547 4 80 2.5 1.0 1.8 1.4 102 chr2L 17181445 intron Gr36c + chr2L 17181496 exon Gr36c + chr2L 17181547 exon Gr36c + chr2L_4_17180001 chr2L_17180001 RAL-83 262 chr2L 17264745 17264769 chr2L 17264822 17264847 6 79 5.0 1.5 3.2 1.4 102 chr2L 17264745 intergenic not near genes chr2L 17264796 intergenic not near genes chr2L 17264847 intergenic not near genes chr2L_6_17260001 chr2L_17260001 RAL-83 263 chr2L 17273192 17273227 chr2L 17277972 17278008 F-element 11 4778 4.5 3.0 3.8 2.3 4816 chr2L 17273192 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278008 intergenic not near genes chr2L_11_17275001 chr2L_17275001 RAL-83 264 chr2L 17386015 17386036 chr2L 17386096 17386102 4 77 2.0 0.5 1.2 1.8 87 chr2L 17386015 intron CLIP-190 + chr2L 17386058 intron CLIP-190 + chr2L 17386102 intron CLIP-190 + chr2L_4_17385001 chr2L_17385001 RAL-83 265 chr2L 17405369 17405402 chr2L 17405483 17405515 25 114 12.5 22.0 17.2 1.4 146 chr2L 17405369 exon CLIP-190 + chr2L 17405442 intron CLIP-190 + chr2L 17405515 exon CLIP-190 + chr2L_25_17405001 chr2L_17405001 RAL-83 266 chr2L 17415547 17415564 chr2L 17415639 17415655 4 91 2.5 1.0 1.8 1.4 108 chr2L 17415547 intron Dif - chr2L 17415601 intron Dif - chr2L 17415655 intron Dif - chr2L_4_17415001 chr2L_17415001 RAL-83 267 chr2L 17424715 17424730 chr2L 17424826 17424842 5 112 1.0 0.5 0.8 2.8 127 chr2L 17424715 intron Dif - chr2L 17424778 intron Dif - chr2L 17424842 intron Dif - chr2L_5_17420001 chr2L_17420001 RAL-83 268 chr2L 17710031 17710060 chr2L 17710127 17710156 4 96 3.0 3.0 3.0 1.0 125 chr2L 17710031 intron CadN - chr2L 17710094 intron CadN - chr2L 17710156 intron CadN - chr2L_4_17710001 chr2L_17710001 RAL-83 269 chr2L 17805521 17805546 chr2L 17805663 17805677 6 139 1.0 4.0 2.5 1.7 156 chr2L 17805521 intron CadN2 - chr2L 17805599 intron CadN2 - chr2L 17805677 intron CadN2 - chr2L_6_17805001 chr2L_17805001 RAL-83 270 chr2L 17867435 17867458 chr2L 17867720 17867744 8 286 2.5 4.5 3.5 1.8 309 chr2L 17867435 intron CadN2 - chr2L 17867590 intron CadN2 - chr2L 17867744 intron CadN2 - chr2L_8_17865001 chr2L_17865001 RAL-83 271 chr2L 17879999 17880018 chr2L 17880086 17880105 5 87 5.0 3.5 4.2 1.0 106 chr2L 17879999 intergenic not near genes chr2L 17880052 intergenic not near genes chr2L 17880105 intergenic not near genes chr2L_5_17880001 chr2L_17880001 RAL-83 272 chr2L 17911964 17911990 chr2L 17914141 17914155 pogo 6 2175 4.5 2.0 3.2 1.4 2191 chr2L 17911964 intergenic not near genes chr2L 17913060 intergenic not near genes chr2L 17914155 intergenic CG43271 - chr2L_6_17910001 chr2L_17910001 RAL-83 273 chr2L 17944417 17944446 chr2L 17944580 17944609 14 161 5.0 6.5 5.8 2.1 192 chr2L 17944417 intergenic not near genes chr2L 17944513 intergenic not near genes chr2L 17944609 intergenic not near genes chr2L_14_17940001 chr2L_17940001 RAL-83 274 chr2L 18051886 18051906 chr2L 18061030 18061053 roo 6 9146 2.0 5.0 3.5 1.3 9167 chr2L 18051886 intron rdo + chr2L 18056470 intron rdo + chr2L 18061053 intron rdo + chr2L_6_18055001 chr2L_18055001 RAL-83 275 chr2L 18243383 18243400 chr2L 18243460 18243477 7 77 3.0 3.5 3.2 1.7 94 chr2L 18243383 intron CG42750 - chr2L 18243430 intron CG42750 - chr2L 18243477 intron CG42750 - chr2L_7_18240001 chr2L_18240001 RAL-83 276 chr2L 18408028 18408053 chr2L 18412812 18412837 Doc 5 4781 3.0 0.5 1.8 1.8 4809 chr2L 18408028 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412837 intergenic not near genes chr2L_5_18410001 chr2L_18410001 RAL-83 277 chr2L 18449500 18449521 chr2L 18449587 18449608 7 87 2.5 7.0 4.8 1.2 108 chr2L 18449500 intergenic bsf - chr2L 18449554 3` UTR bsf - chr2L 18449608 3` UTR bsf - chr2L_7_18445001 chr2L_18445001 RAL-83 278 chr2L 18538568 18538599 chr2L 18538650 18538680 11 80 1.0 1.5 1.2 5.0 112 chr2L 18538568 intron Pde11 - chr2L 18538624 intron Pde11 - chr2L 18538680 intron Pde11 - chr2L_11_18535001 chr2L_18535001 RAL-83 279 chr2L 18572186 18572202 chr2L 18572267 18572285 4 82 4.5 4.0 4.2 0.8 99 chr2L 18572186 intron Pde11 - chr2L 18572236 intron Pde11 - chr2L 18572285 intron Pde11 - chr2L_4_18570001 chr2L_18570001 RAL-83 280 chr2L 18639977 18640010 chr2L 18640569 18640602 10 589 2.0 1.0 1.5 4.0 625 chr2L 18639977 intron MESR3 + chr2L 18640290 intron MESR3 + chr2L 18640602 intron MESR3 + chr2L_10_18640001 chr2L_18640001 RAL-83 281 chr2L 19024096 19024097 chr2L 21768291 21768294 5 2744195 5.5 20.0 12.8 0.4 2744198 chr2L 19024096 3` UTR CR43700 - chr2L 20396195 intron CG10947 - chr2L 21768294 intron CG31612 - chr2L_5_20395001 chr2L_20395001 RAL-83 282 chr2L 19147368 19147392 chr2L 19154403 19154427 297 4 7034 4.0 1.5 2.8 1.1 7059 chr2L 19147368 intron brat + chr2L 19150898 intron brat + chr2L 19154427 intron brat + chr2L_4_19150001 chr2L_19150001 RAL-83 283 chr2L 19266175 19266203 chr2L 19266342 19266369 7 164 3.5 4.0 3.8 1.5 194 chr2L 19266175 intergenic not near genes chr2L 19266272 intergenic not near genes chr2L 19266369 intergenic not near genes chr2L_7_19265001 chr2L_19265001 RAL-83 284 chr2L 19345016 19345046 chr2L 19357225 19357244 blood 9 12206 3.0 2.5 2.8 2.4 12228 chr2L 19345016 intron dnt - chr2L 19351130 intron dnt - chr2L 19357244 intron dnt - chr2L_9_19350001 chr2L_19350001 RAL-83 285 chr2L 19365559 19365566 chr2L 19365619 19365642 7 73 0.0 1.5 0.8 3.9 83 chr2L 19365559 intergenic CG13086 + chr2L 19365600 intergenic CG13086 + chr2L 19365642 intergenic CG13086 + chr2L_7_19365001 chr2L_19365001 RAL-83 286 chr2L 19378344 19378370 chr2L 19378427 19378452 8 81 5.5 4.0 4.8 1.4 108 chr2L 19378344 intergenic not near genes chr2L 19378398 intergenic not near genes chr2L 19378452 intergenic not near genes chr2L_8_19375001 chr2L_19375001 RAL-83 287 chr2L 19380510 19380529 chr2L 19380590 19380609 4 80 2.5 2.5 2.5 1.1 99 chr2L 19380510 intergenic CG17350 + chr2L 19380560 intergenic CG17350 + chr2L 19380609 intergenic CG17350 + chr2L_4_19380001 chr2L_19380001 RAL-83 288 chr2L 19407727 19407738 chr2L 19407913 19407935 7 195 6.0 1.5 3.8 1.5 208 chr2L 19407727 intron Pax - chr2L 19407831 intron Pax - chr2L 19407935 intron Pax - chr2L_7_19405001 chr2L_19405001 RAL-83 289 chr2L 19620093 19620105 chr2L 19621082 19621094 jockey 5 988 11.0 5.0 8.0 0.6 1001 chr2L 19620093 intron Lar + chr2L 19620594 intron Lar + chr2L 19621094 intron Lar + chr2L_5_19620001 chr2L_19620001 RAL-83 290 chr2L 19620113 19620127 chr2L 19621081 19621114 jockey 10 985 2.0 5.0 3.5 2.2 1001 chr2L 19620113 intron Lar + chr2L 19620614 intron Lar + chr2L 19621114 intron Lar + chr2L_10_19620001 chr2L_19620001 RAL-83 291 chr2L 19703534 19703560 chr2L 19712670 19712695 roo 10 9135 2.5 3.5 3.0 2.5 9161 chr2L 19703534 intron Lar + chr2L 19708114 intron Lar + chr2L 19712695 intron Lar + chr2L_10_19705001 chr2L_19705001 RAL-83 292 chr2L 19762807 19762823 chr2L 19763049 19763065 pogo 4 242 7.0 4.5 5.8 0.6 258 chr2L 19762807 5` UTR fbp - chr2L 19762936 intron fbp - chr2L 19763065 intron fbp - chr2L_4_19760001 chr2L_19760001 RAL-83 293 chr2L 19837279 19837308 chr2L 19837359 19837387 15 79 3.5 5.0 4.2 2.9 108 chr2L 19837279 intron sick + chr2L 19837333 intron sick + chr2L 19837387 intron sick + chr2L_15_19835001 chr2L_19835001 RAL-83 294 chr2L 19846248 19846272 chr2L 19846328 19846353 5 80 0.5 2.5 1.5 2.0 105 chr2L 19846248 intron sick + chr2L 19846300 intron sick + chr2L 19846353 intron sick + chr2L_5_19845001 chr2L_19845001 RAL-83 295 chr2L 19901497 19901516 chr2L 19901599 19901619 4 102 2.0 1.5 1.8 1.4 122 chr2L 19901497 intron sick + chr2L 19901558 intron sick + chr2L 19901619 intron sick + chr2L_4_19900001 chr2L_19900001 RAL-83 296 chr2L 19911294 19911325 chr2L 19911382 19911405 7 87 2.0 5.5 3.8 1.5 111 chr2L 19911294 intron,3` UTR sick +,CR43097 - chr2L 19911350 intron,3` UTR sick +,CR43097 - chr2L 19911405 intron,3` UTR sick +,CR43097 - chr2L_7_19910001 chr2L_19910001 RAL-83 297 chr2L 20057056 20057065 chr2L 20057133 20057142 4 77 0.5 1.0 0.8 2.2 86 chr2L 20057056 intergenic not near genes chr2L 20057099 intergenic not near genes chr2L 20057142 intergenic not near genes chr2L_4_20055001 chr2L_20055001 RAL-83 298 chr2L 20079521 20079545 chr2L 20079642 20079666 5 120 1.0 0.5 0.8 2.8 145 chr2L 20079521 intron,intron neb +,fok - chr2L 20079594 intron,intron neb +,fok - chr2L 20079666 intron,intron neb +,fok - chr2L_5_20075001 chr2L_20075001 RAL-83 299 chr2L 20296506 20296530 chr2L 20296587 20296605 10 80 1.5 5.0 3.2 2.4 99 chr2L 20296506 intergenic CR43414 - chr2L 20296556 intergenic CR43414 - chr2L 20296605 intergenic CR43414 - chr2L_10_20295001 chr2L_20295001 RAL-83 300 chr2L 20303165 20303191 chr2L 20310633 20310659 blood 4 7468 2.0 1.5 1.8 1.4 7494 chr2L 20303165 intergenic not near genes chr2L 20306912 intergenic not near genes chr2L 20310659 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-83 301 chr2L 20498689 20498708 chr2L 20498788 20498807 5 99 3.0 6.5 4.8 0.9 118 chr2L 20498689 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498807 intergenic not near genes chr2L_5_20495001 chr2L_20495001 RAL-83 302 chr2L 20549141 20549148 chr2L 20549220 20549229 5 81 2.5 3.5 3.0 1.2 88 chr2L 20549141 intergenic not near genes chr2L 20549185 intergenic not near genes chr2L 20549229 intergenic not near genes chr2L_5_20545001 chr2L_20545001 RAL-83 303 chr2L 20553183 20553219 chr2L 20553259 20553276 5 71 1.0 1.5 1.2 2.3 93 chr2L 20553183 intergenic not near genes chr2L 20553230 intergenic not near genes chr2L 20553276 intergenic not near genes chr2L_5_20550001 chr2L_20550001 RAL-83 304 chr2L 20568663 20568686 chr2L 20569053 20569076 X-element 10 390 2.5 4.5 3.5 2.2 413 chr2L 20568663 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569076 intron CR45347 + chr2L_10_20565001 chr2L_20565001 RAL-83 305 chr2L 20576220 20576226 chr2L 20583689 20583695 blood 4 7469 8.0 3.5 5.8 0.6 7475 chr2L 20576220 intergenic CR45347 + chr2L 20579958 intergenic not near genes chr2L 20583695 3` UTR CR44909 - chr2L_4_20575001 chr2L_20575001 RAL-83 306 chr2L 20602720 20602747 chr2L 20602808 20602835 7 87 4.0 2.5 3.2 1.7 115 chr2L 20602720 intron CR44909 - chr2L 20602778 intron CR44909 - chr2L 20602835 intron CR44909 - chr2L_7_20600001 chr2L_20600001 RAL-83 307 chr2L 20607658 20607672 chr2L 20607718 20607751 7 70 0.5 6.0 3.2 1.7 93 chr2L 20607658 intron,3` UTR CR44909 -,CR43608 - chr2L 20607704 intron,3` UTR CR44909 -,CR43608 - chr2L 20607751 intron,3` UTR CR44909 -,CR43608 - chr2L_7_20605001 chr2L_20605001 RAL-83 308 chr2L 20639510 20639532 chr2L 20639786 20639808 INE-1 4 272 1.5 1.0 1.2 1.8 298 chr2L 20639510 intergenic not near genes chr2L 20639659 intergenic CG31680 + chr2L 20639808 intergenic CG31680 + chr2L_4_20635001 chr2L_20635001 RAL-83 309 chr2L 20668689 20668720 chr2L 20668765 20668796 8 75 3.0 6.0 4.5 1.5 107 chr2L 20668689 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668796 intron CG31678 - chr2L_8_20665001 chr2L_20665001 RAL-83 310 chr2L 20879817 20879835 chr2L 20879899 20879918 10 82 3.5 7.5 5.5 1.5 101 chr2L 20879817 intron,intron CG43739 -,sky - chr2L 20879868 intron,intron CG43739 -,sky - chr2L 20879918 intron,intron CG43739 -,sky - chr2L_10_20875001 chr2L_20875001 RAL-83 311 chr2L 20879836 20879843 chr2L 20879897 20879926 7 75 2.0 7.5 4.8 1.2 90 chr2L 20879836 intron,intron CG43739 -,sky - chr2L 20879881 intron,intron CG43739 -,sky - chr2L 20879926 intron,intron CG43739 -,sky - chr2L_7_20875001 chr2L_20875001 RAL-83 312 chr2L 20901473 20901486 chr2L 20902622 20902650 1360 4 1156 0.0 3.0 1.5 1.6 1177 chr2L 20901473 intron,intron CG43739 -,sky - chr2L 20902062 intron,intron CG43739 -,sky - chr2L 20902650 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-83 313 chr2L 20911032 20911058 chr2L 20911108 20911134 7 73 3.0 6.0 4.5 1.3 102 chr2L 20911032 intron,intron CG43739 -,sky - chr2L 20911083 intron,intron CG43739 -,sky - chr2L 20911134 intron,intron CG43739 -,sky - chr2L_7_20910001 chr2L_20910001 RAL-83 314 chr2L 20951318 20951327 chr2L 20952978 20952988 4 1660 13.5 20.5 17.0 0.2 1670 chr2L 20951318 intergenic not near genes chr2L 20952153 intergenic not near genes chr2L 20952988 intergenic not near genes chr2L_4_20950001 chr2L_20950001 RAL-83 315 chr2L 20967081 20967097 chr2L 20967167 20967181 4 82 4.0 3.5 3.8 0.8 100 chr2L 20967081 3` UTR CG42238 - chr2L 20967131 3` UTR CG42238 - chr2L 20967181 3` UTR CG42238 - chr2L_4_20965001 chr2L_20965001 RAL-83 316 chr2L 20984738 20984772 chr2L 20984830 20984864 12 89 2.5 3.0 2.8 3.2 126 chr2L 20984738 intron CG42238 - chr2L 20984801 intron CG42238 - chr2L 20984864 intron CG42238 - chr2L_12_20980001 chr2L_20980001 RAL-83 317 chr2L 20991035 20991069 chr2L 20991113 20991147 9 77 5.5 2.0 3.8 1.9 112 chr2L 20991035 intron CG42238 - chr2L 20991091 intron CG42238 - chr2L 20991147 intron CG42238 - chr2L_9_20990001 chr2L_20990001 RAL-83 318 chr2L 21020282 21020296 chr2L 21023958 21023973 NOF 7 3677 5.5 4.5 5.0 1.2 3691 chr2L 21020282 intron CG42238 - chr2L 21022128 intron CG42238 - chr2L 21023973 intron CG42238 - chr2L_7_21020001 chr2L_21020001 RAL-83 319 chr2L 21020297 21020309 chr2L 21023954 21023986 NOF 6 3670 3.0 3.5 3.2 1.4 3689 chr2L 21020297 intron CG42238 - chr2L 21022142 intron CG42238 - chr2L 21023986 intron CG42238 - chr2L_6_21020001 chr2L_21020001 RAL-83 320 chr2L 21039865 21039903 chr2L 21039951 21039985 13 82 0.5 3.5 2.0 4.3 120 chr2L 21039865 intron CG42238 - chr2L 21039925 intron CG42238 - chr2L 21039985 intron CG42238 - chr2L_13_21035001 chr2L_21035001 RAL-83 321 chr2L 21074919 21074940 chr2L 21075010 21075031 4 91 2.0 1.0 1.5 1.6 112 chr2L 21074919 intergenic tadr + chr2L 21074975 intergenic tadr + chr2L 21075031 intergenic tadr + chr2L_4_21070001 chr2L_21070001 RAL-83 322 chr2L 21088924 21088946 chr2L 21089004 21089029 7 82 1.0 1.5 1.2 3.2 105 chr2L 21088924 intergenic ppk13 -,CG9259 + chr2L 21088976 intergenic ppk13 -,CG9259 + chr2L 21089029 intergenic ppk13 -,CG9259 + chr2L_7_21085001 chr2L_21085001 RAL-83 323 chr2L 21245283 21245305 chr2L 21245515 21245546 8 238 1.0 4.5 2.8 2.1 263 chr2L 21245283 intron Hr39 + chr2L 21245414 intron Hr39 + chr2L 21245546 intron Hr39 + chr2L_8_21245001 chr2L_21245001 RAL-83 324 chr2L 21286608 21286632 chr2L 21286686 21286710 6 78 1.0 0.5 0.8 3.3 102 chr2L 21286608 exon Mio - chr2L 21286659 intron Mio - chr2L 21286710 intron Mio - chr2L_6_21285001 chr2L_21285001 RAL-83 325 chr2L 21819342 21819360 chr2L 21819429 21819447 5 87 0.5 2.0 1.2 2.3 105 chr2L 21819342 intergenic CR44786 + chr2L 21819394 intergenic CR44786 + chr2L 21819447 intergenic CR44786 + chr2L_5_21815001 chr2L_21815001 RAL-83 326 chr2L 21824124 21824147 chr2L 21824211 21824234 4 87 0.5 1.5 1.0 2.0 110 chr2L 21824124 intergenic not near genes chr2L 21824179 intergenic not near genes chr2L 21824234 intergenic not near genes chr2L_4_21820001 chr2L_21820001 RAL-83 327 chr2L 21981686 21981714 chr2L 21990845 21990879 roo 7 9161 2.0 5.0 3.5 1.6 9193 chr2L 21981686 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990879 exon CG2528 - chr2L_7_21985001 chr2L_21985001 RAL-83 328 chr2L 22239433 22239456 chr2L 22239506 22239537 9 79 5.0 2.5 3.8 1.9 104 chr2L 22239433 3` UTR CR43765 - chr2L 22239485 3` UTR CR43765 - chr2L 22239537 3` UTR CR43765 - chr2L_9_22235001 chr2L_22235001 RAL-83 329 chr2L 22258619 22258648 chr2L 22260743 22260771 G6 9 2123 2.5 1.5 2.0 3.0 2152 chr2L 22258619 intergenic Tif-IA + chr2L 22259695 intergenic not near genes chr2L 22260771 intergenic not near genes chr2L_9_22255001 chr2L_22255001 RAL-83 330 chr2L 22706811 22706839 chr2L 22706911 22706937 5 100 1.0 0.5 0.8 2.8 126 chr2L 22706811 intron CG40006 - chr2L 22706874 intron CG40006 - chr2L 22706937 intron CG40006 - chr2L_5_22705001 chr2L_22705001 RAL-83 331 chr2R 529323 529352 chr2R 537948 537977 Max-element 9 8624 1.0 2.0 1.5 3.6 8654 chr2R 529323 intron CG40378 + chr2R 533650 intron CG40378 + chr2R 537977 intron CG40378 + chr2R_9_530001 chr2R_530001 RAL-83 332 chr2R 552752 552788 chr2R 553969 554001 1360 8 1211 1.5 2.0 1.8 2.9 1249 chr2R 552752 intron CG40378 + chr2R 553376 intron CG40378 + chr2R 554001 intron CG40378 + chr2R_8_550001 chr2R_550001 RAL-83 333 chr2R 1365864 1365887 chr2R 1365976 1365999 8 112 1.5 1.5 1.5 3.2 135 chr2R 1365864 intron l(2)41Ab + chr2R 1365932 intron l(2)41Ab + chr2R 1365999 intron l(2)41Ab + chr2R_8_1365001 chr2R_1365001 RAL-83 334 chr2R 2508319 2508338 chr2R 2508457 2508476 5 138 1.0 6.5 3.8 1.0 157 chr2R 2508319 intron MFS17 - chr2R 2508398 intron MFS17 - chr2R 2508476 intron MFS17 - chr2R_5_2505001 chr2R_2505001 RAL-83 335 chr2R 3144093 3144110 chr2R 3393371 3393388 Doc 5 249278 6.5 3.5 5.0 0.8 249295 chr2R 3144093 intron CG42596 + chr2R 3268740 intergenic not near genes chr2R 3393388 intergenic not near genes chr2R_5_3265001 chr2R_3265001 RAL-83 336 chr2R 3293749 3293766 chr2R 3293827 3293844 7 77 0.5 1.5 1.0 3.5 95 chr2R 3293749 intergenic not near genes chr2R 3293796 intergenic not near genes chr2R 3293844 intergenic not near genes chr2R_7_3290001 chr2R_3290001 RAL-83 337 chr2R 3818931 3818943 chr2R 3819047 3819059 7 115 13.0 1.5 7.2 0.9 128 chr2R 3818931 intergenic not near genes chr2R 3818995 intergenic not near genes chr2R 3819059 intergenic not near genes chr2R_7_3815001 chr2R_3815001 RAL-83 338 chr2R 4603347 4603353 chr2R 4603429 4603436 4 82 7.5 11.0 9.2 0.4 89 chr2R 4603347 intron p120ctn + chr2R 4603392 intron p120ctn + chr2R 4603436 intron p120ctn + chr2R_4_4600001 chr2R_4600001 RAL-83 339 chr2R 4603354 4603373 chr2R 4603425 4603456 6 80 2.5 10.0 6.2 0.8 102 chr2R 4603354 intron p120ctn + chr2R 4603405 intron p120ctn + chr2R 4603456 intron p120ctn + chr2R_6_4600001 chr2R_4600001 RAL-83 340 chr2R 4624357 4624380 chr2R 4624476 4624500 9 119 7.0 3.5 5.2 1.5 143 chr2R 4624357 intergenic not near genes chr2R 4624428 intergenic not near genes chr2R 4624500 intergenic not near genes chr2R_9_4620001 chr2R_4620001 RAL-83 341 chr2R 4750343 4750369 chr2R 4751498 4751521 1360 5 1155 0.5 2.5 1.5 2.0 1178 chr2R 4750343 intron conu + chr2R 4750932 intron conu + chr2R 4751521 intron conu + chr2R_5_4750001 chr2R_4750001 RAL-83 342 chr2R 4933367 4933389 chr2R 4933921 4933921 10 557 0.5 4.0 2.2 3.1 554 chr2R 4933367 intron Ir41a + chr2R 4933644 intron Ir41a + chr2R 4933921 intron Ir41a + chr2R_10_4930001 chr2R_4930001 RAL-83 343 chr2R 4940971 4940979 chr2R 4943420 4943428 4 2450 9.5 19.0 14.2 0.3 2457 chr2R 4940971 intron Ir41a + chr2R 4942200 intron Ir41a + chr2R 4943428 intron Ir41a + chr2R_4_4940001 chr2R_4940001 RAL-83 344 chr2R 5019280 5019311 chr2R 5019363 5019393 6 83 1.0 1.5 1.2 2.7 113 chr2R 5019280 intron Ir41a + chr2R 5019336 intron Ir41a + chr2R 5019393 intron Ir41a + chr2R_6_5015001 chr2R_5015001 RAL-83 345 chr2R 5080796 5080808 chr2R 5080878 5080899 4 89 3.5 1.5 2.5 1.1 103 chr2R 5080796 intergenic not near genes chr2R 5080848 intergenic not near genes chr2R 5080899 intergenic not near genes chr2R_4_5080001 chr2R_5080001 RAL-83 346 chr2R 5087173 5087210 chr2R 5087273 5087313 11 101 2.5 3.0 2.8 2.9 140 chr2R 5087173 intergenic not near genes chr2R 5087243 intergenic not near genes chr2R 5087313 intergenic not near genes chr2R_11_5085001 chr2R_5085001 RAL-83 347 chr2R 5396256 5396289 chr2R 5396494 5396527 15 238 18.0 25.5 21.8 0.7 271 chr2R 5396256 intergenic not near genes chr2R 5396392 intergenic not near genes chr2R 5396527 intergenic not near genes chr2R_15_5395001 chr2R_5395001 RAL-83 348 chr2R 5472367 5472369 chr2R 5472460 5472463 4 94 14.0 3.0 8.5 0.4 96 chr2R 5472367 intron CG30440 - chr2R 5472415 intron CG30440 - chr2R 5472463 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-83 349 chr2R 5472370 5472391 chr2R 5472459 5472485 8 92 6.5 3.0 4.8 1.4 115 chr2R 5472370 intron CG30440 - chr2R 5472428 intron CG30440 - chr2R 5472485 intron CG30440 - chr2R_8_5470001 chr2R_5470001 RAL-83 350 chr2R 5473381 5473395 chr2R 5473463 5473490 5 89 2.0 3.0 2.5 1.4 109 chr2R 5473381 intron CG30440 - chr2R 5473436 intron CG30440 - chr2R 5473490 intron CG30440 - chr2R_5_5470001 chr2R_5470001 RAL-83 351 chr2R 5581403 5581425 chr2R 5627604 5627634 5 46207 0.5 6.5 3.5 1.1 46231 chr2R 5581403 intergenic not near genes chr2R 5604518 intron Fis1 - chr2R 5627634 intergenic not near genes chr2R_5_5600001 chr2R_5600001 RAL-83 352 chr2R 5640028 5640045 chr2R 5640104 5640122 6 74 5.5 4.0 4.8 1.0 94 chr2R 5640028 intergenic not near genes chr2R 5640075 intergenic not near genes chr2R 5640122 intergenic not near genes chr2R_6_5640001 chr2R_5640001 RAL-83 353 chr2R 5794234 5794264 chr2R 5794362 5794392 11 128 1.5 2.0 1.8 3.9 158 chr2R 5794234 intergenic not near genes chr2R 5794313 intergenic not near genes chr2R 5794392 intergenic not near genes chr2R_11_5790001 chr2R_5790001 RAL-83 354 chr2R 5869278 5869302 chr2R 5874354 5874378 flea 4 5076 1.5 1.0 1.2 1.8 5100 chr2R 5869278 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874378 intergenic not near genes chr2R_4_5870001 chr2R_5870001 RAL-83 355 chr2R 5897008 5897037 chr2R 5897094 5897120 13 83 3.0 3.5 3.2 3.1 112 chr2R 5897008 intron CG43366 + chr2R 5897064 intron CG43366 + chr2R 5897120 intron CG43366 + chr2R_13_5895001 chr2R_5895001 RAL-83 356 chr2R 5933797 5933821 chr2R 5933874 5933898 8 76 2.5 0.0 1.2 3.6 101 chr2R 5933797 intergenic not near genes chr2R 5933848 intergenic not near genes chr2R 5933898 intergenic not near genes chr2R_8_5930001 chr2R_5930001 RAL-83 357 chr2R 5945799 5945833 chr2R 5945892 5945926 8 90 3.0 2.0 2.5 2.3 127 chr2R 5945799 intergenic not near genes chr2R 5945862 intergenic not near genes chr2R 5945926 intergenic not near genes chr2R_8_5945001 chr2R_5945001 RAL-83 358 chr2R 6096716 6096750 chr2R 6101910 6101939 BS 11 5190 4.5 4.5 4.5 2.0 5223 chr2R 6096716 intron EcR - chr2R 6099328 intron EcR - chr2R 6101939 intron EcR - chr2R_11_6095001 chr2R_6095001 RAL-83 359 chr2R 6118367 6118394 chr2R 6118481 6118508 10 114 2.0 4.0 3.0 2.5 141 chr2R 6118367 intron EcR - chr2R 6118438 intron EcR - chr2R 6118508 intron EcR - chr2R_10_6115001 chr2R_6115001 RAL-83 360 chr2R 6194689 6194703 chr2R 6194770 6194786 5 82 8.0 8.5 8.2 0.5 97 chr2R 6194689 intron Ptr - chr2R 6194738 intron Ptr - chr2R 6194786 intron Ptr - chr2R_5_6190001 chr2R_6190001 RAL-83 361 chr2R 6232046 6232073 chr2R 6232293 6232306 7 247 3.5 7.0 5.2 1.1 260 chr2R 6232046 intron bin3 + chr2R 6232176 intron bin3 + chr2R 6232306 intron bin3 + chr2R_7_6230001 chr2R_6230001 RAL-83 362 chr2R 6494531 6494549 chr2R 6499293 6499311 F-element 4 4762 2.0 4.5 3.2 1.0 4780 chr2R 6494531 intergenic not near genes chr2R 6496921 intergenic not near genes chr2R 6499311 intergenic not near genes chr2R_4_6495001 chr2R_6495001 RAL-83 363 chr2R 6532910 6532940 chr2R 6533012 6533032 11 101 3.5 2.5 3.0 2.8 122 chr2R 6532910 intron,3` UTR jing +,CR43905 - chr2R 6532971 intron,3` UTR jing +,CR43905 - chr2R 6533032 intron,3` UTR jing +,CR43905 - chr2R_11_6530001 chr2R_6530001 RAL-83 364 chr2R 6579776 6579803 chr2R 6584862 6584888 flea 5 5086 0.5 3.0 1.8 1.8 5112 chr2R 6579776 intron jing + chr2R 6582332 intron jing + chr2R 6584888 intron jing + chr2R_5_6580001 chr2R_6580001 RAL-83 365 chr2R 6691123 6691151 chr2R 6691202 6691230 7 79 1.5 1.5 1.5 2.8 107 chr2R 6691123 intron CG9422 + chr2R 6691176 intron CG9422 + chr2R 6691230 intron CG9422 + chr2R_7_6690001 chr2R_6690001 RAL-83 366 chr2R 6696607 6696633 chr2R 6696687 6696716 12 81 8.5 6.5 7.5 1.4 109 chr2R 6696607 5` UTR Mob4 - chr2R 6696662 intergenic Mob4 -,Rab2 + chr2R 6696716 intergenic Rab2 +,Mob4 - chr2R_12_6695001 chr2R_6695001 RAL-83 367 chr2R 6781860 6781888 chr2R 6783851 6783879 8 1989 3.0 5.5 4.2 1.5 2019 chr2R 6781860 intron Epac - chr2R 6782870 intron Epac - chr2R 6783879 intron Epac - chr2R_8_6780001 chr2R_6780001 RAL-83 368 chr2R 6942396 6942427 chr2R 6942686 6942695 10 287 3.0 7.0 5.0 1.7 299 chr2R 6942396 intron mim - chr2R 6942546 intron mim - chr2R 6942695 intron mim - chr2R_10_6940001 chr2R_6940001 RAL-83 369 chr2R 7235836 7235853 chr2R 7240905 7240919 jockey 5 5081 4.0 3.0 3.5 1.1 5083 chr2R 7235836 intergenic not near genes chr2R 7238378 intergenic not near genes chr2R 7240919 intergenic not near genes chr2R_5_7235001 chr2R_7235001 RAL-83 370 chr2R 7250739 7250755 chr2R 7250833 7250854 7 96 1.0 3.5 2.2 2.2 115 chr2R 7250739 intergenic Gadd45 + chr2R 7250796 intergenic Gadd45 + chr2R 7250854 intergenic Gadd45 + chr2R_7_7250001 chr2R_7250001 RAL-83 371 chr2R 7389574 7389600 chr2R 7389676 7389686 5 96 0.5 0.5 0.5 3.3 112 chr2R 7389574 intron CG11107 + chr2R 7389630 intron CG11107 + chr2R 7389686 intron CG11107 + chr2R_5_7385001 chr2R_7385001 RAL-83 372 chr2R 7434894 7434918 chr2R 7439195 7439219 Juan 4 4300 1.5 3.5 2.5 1.1 4325 chr2R 7434894 intergenic so + chr2R 7437056 intergenic not near genes chr2R 7439219 intergenic not near genes chr2R_4_7435001 chr2R_7435001 RAL-83 373 chr2R 7608404 7608437 chr2R 7613606 7613638 I-element 5 5202 1.0 0.5 0.8 2.8 5234 chr2R 7608404 intron CG1358 - chr2R 7611021 intron CG1358 - chr2R 7613638 intron CG1358 - chr2R_5_7610001 chr2R_7610001 RAL-83 374 chr2R 7642868 7642892 chr2R 7642948 7642972 5 80 2.5 3.5 3.0 1.2 104 chr2R 7642868 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642972 intron CG43340 + chr2R_5_7640001 chr2R_7640001 RAL-83 375 chr2R 7692013 7692038 chr2R 7692094 7692118 4 80 1.5 1.0 1.2 1.8 105 chr2R 7692013 intron CG1399 - chr2R 7692066 intron CG1399 - chr2R 7692118 intron CG1399 - chr2R_4_7690001 chr2R_7690001 RAL-83 376 chr2R 7714079 7714108 chr2R 7714155 7714184 5 76 1.0 0.0 0.5 3.3 105 chr2R 7714079 exon CG1942 + chr2R 7714132 3` UTR CG1942 + chr2R 7714184 intergenic CG1942 + chr2R_5_7710001 chr2R_7710001 RAL-83 377 chr2R 7815670 7815698 chr2R 7822139 7822167 Burdock 5 6469 4.5 4.0 4.2 1.0 6497 chr2R 7815670 intergenic CG1882 + chr2R 7818918 intergenic not near genes chr2R 7822167 3` UTR cathD - chr2R_5_7815001 chr2R_7815001 RAL-83 378 chr2R 7869189 7869221 chr2R 7873974 7874007 Doc 6 4786 3.0 9.5 6.2 0.8 4818 chr2R 7869189 intron Dgk - chr2R 7871598 intron Dgk - chr2R 7874007 intron Dgk - chr2R_6_7870001 chr2R_7870001 RAL-83 379 chr2R 7897139 7897151 chr2R 7897210 7897239 5 85 0.0 6.5 3.2 1.2 100 chr2R 7897139 intron CG30377 + chr2R 7897189 intron CG30377 + chr2R 7897239 intron CG30377 + chr2R_5_7895001 chr2R_7895001 RAL-83 380 chr2R 7916424 7916454 chr2R 7916509 7916534 11 81 3.0 4.0 3.5 2.4 110 chr2R 7916424 5` UTR CG12159 - chr2R 7916479 intergenic CG12159 -,Cul1 + chr2R 7916534 intergenic CG12159 -,Cul1 + chr2R_11_7915001 chr2R_7915001 RAL-83 381 chr2R 8015645 8015683 chr2R 8017668 8017694 15 2020 1.0 6.5 3.8 3.1 2049 chr2R 8015645 intergenic mir-4981 + chr2R 8016670 intergenic not near genes chr2R 8017694 intergenic not near genes chr2R_15_8015001 chr2R_8015001 RAL-83 382 chr2R 8160934 8160950 chr2R 8161024 8161039 1360 9 89 4.0 9.0 6.5 1.2 105 chr2R 8160934 intron CG8708 - chr2R 8160986 intron CG8708 - chr2R 8161039 intron CG8708 - chr2R_9_8160001 chr2R_8160001 RAL-83 383 chr2R 8330866 8330892 chr2R 8331350 8331378 roo 8 484 4.5 3.0 3.8 1.7 512 chr2R 8330866 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331378 intron pdm3 + chr2R_8_8330001 chr2R_8330001 RAL-83 384 chr2R 8524946 8524970 chr2R 8525085 8525109 4 139 4.0 0.5 2.2 1.2 163 chr2R 8524946 intron mtt - chr2R 8525028 intron mtt - chr2R 8525109 intron mtt - chr2R_4_8525001 chr2R_8525001 RAL-83 385 chr2R 8536198 8536228 chr2R 8536430 8536460 12 231 6.5 3.5 5.0 2.0 262 chr2R 8536198 intergenic not near genes chr2R 8536329 intergenic not near genes chr2R 8536460 intergenic not near genes chr2R_12_8535001 chr2R_8535001 RAL-83 386 chr2R 8557445 8557474 chr2R 8557912 8557923 8 464 6.0 2.0 4.0 1.6 478 chr2R 8557445 intergenic not near genes chr2R 8557684 intergenic not near genes chr2R 8557923 intergenic CR45308 - chr2R_8_8555001 chr2R_8555001 RAL-83 387 chr2R 8564266 8564293 chr2R 8565268 8565296 10 1002 14.5 28.5 21.5 0.4 1030 chr2R 8564266 3` UTR Cyp6a14 - chr2R 8564781 intron Cyp6a14 - chr2R 8565296 exon Cyp6a14 - chr2R_10_8560001 chr2R_8560001 RAL-83 388 chr2R 8563668 8563702 chr2R 8565969 8566003 17 2305 37.5 33.5 35.5 0.5 2335 chr2R 8563668 intergenic not near genes chr2R 8564836 exon Cyp6a14 - chr2R 8566003 5` UTR Cyp6a14 - chr2R_17_8560001 chr2R_8560001 RAL-83 389 chr2R 8566030 8566067 chr2R 8566982 8567013 1360 4 948 3.5 0.5 2.0 1.3 983 chr2R 8566030 5` UTR Cyp6a14 - chr2R 8566522 5` UTR Cyp6a14 - chr2R 8567013 5` UTR Cyp6a14 - chr2R_4_8565001 chr2R_8565001 RAL-83 390 chr2R 8653993 8654020 chr2R 8654080 8654107 8 86 3.0 4.0 3.5 1.8 114 chr2R 8653993 intron ptc + chr2R 8654050 intron ptc + chr2R 8654107 intron ptc + chr2R_8_8650001 chr2R_8650001 RAL-83 391 chr2R 8658235 8658265 chr2R 8658311 8658341 8 69 1.5 6.5 4.0 1.6 106 chr2R 8658235 intron ptc + chr2R 8658288 intron ptc + chr2R 8658341 intron ptc + chr2R_8_8655001 chr2R_8655001 RAL-83 392 chr2R 8714707 8714719 chr2R 8714793 8714806 7 86 0.0 2.5 1.2 3.2 99 chr2R 8714707 3` UTR PGRP-SC1b + chr2R 8714756 3` UTR PGRP-SC1b + chr2R 8714806 3` UTR PGRP-SC1b + chr2R_7_8710001 chr2R_8710001 RAL-83 393 chr2R 8722764 8722790 chr2R 8723004 8723031 pogo 8 238 6.5 3.5 5.0 1.3 267 chr2R 8722764 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723031 intron CG14767 - chr2R_8_8720001 chr2R_8720001 RAL-83 394 chr2R 8806324 8806359 chr2R 8806523 8806557 12 195 4.0 4.5 4.2 2.3 233 chr2R 8806324 intron sns + chr2R 8806440 intron sns + chr2R 8806557 intron sns + chr2R_12_8805001 chr2R_8805001 RAL-83 395 chr2R 8833425 8833450 chr2R 8833507 8833532 11 81 1.5 3.0 2.2 3.4 107 chr2R 8833425 intron sns + chr2R 8833478 intron sns + chr2R 8833532 intron sns + chr2R_11_8830001 chr2R_8830001 RAL-83 396 chr2R 8859648 8859675 chr2R 8859727 8859731 9 76 4.5 6.0 5.2 1.5 83 chr2R 8859648 intergenic not near genes chr2R 8859690 intergenic not near genes chr2R 8859731 intergenic not near genes chr2R_9_8855001 chr2R_8855001 RAL-83 397 chr2R 9016945 9016978 chr2R 9017030 9017064 11 86 2.5 3.5 3.0 2.8 119 chr2R 9016945 5` UTR CG13744 - chr2R 9017004 5` UTR CG13744 - chr2R 9017064 5` UTR CG13744 - chr2R_11_9015001 chr2R_9015001 RAL-83 398 chr2R 9019864 9019897 chr2R 9019939 9019960 10 74 1.5 2.5 2.0 3.3 96 chr2R 9019864 exon CG8170 - chr2R 9019912 intron CG8170 - chr2R 9019960 intron CG8170 - chr2R_10_9015001 chr2R_9015001 RAL-83 399 chr2R 9151303 9151335 chr2R 9157773 9157805 Burdock 9 6470 3.5 2.0 2.8 2.4 6502 chr2R 9151303 exon CG30345 + chr2R 9154554 intergenic not near genes chr2R 9157805 intergenic CG8008 - chr2R_9_9150001 chr2R_9150001 RAL-83 400 chr2R 9161976 9162007 chr2R 9162061 9162092 10 85 2.5 2.0 2.2 3.1 116 chr2R 9161976 5` UTR CR44283 + chr2R 9162034 intergenic CG8046 -,CR44283 + chr2R 9162092 3` UTR CG8046 - chr2R_10_9160001 chr2R_9160001 RAL-83 401 chr2R 9183133 9183152 chr2R 9183215 9183234 5 82 2.0 0.0 1.0 2.5 101 chr2R 9183133 intron ltd - chr2R 9183184 intron ltd - chr2R 9183234 intron ltd - chr2R_5_9180001 chr2R_9180001 RAL-83 402 chr2R 9212692 9212700 chr2R 9213178 9213186 roo 4 486 11.0 6.0 8.5 0.4 494 chr2R 9212692 intergenic CR45309 + chr2R 9212939 intergenic CR45309 + chr2R 9213186 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-83 403 chr2R 9212706 9212719 chr2R 9213177 9213188 roo 6 474 7.5 5.5 6.5 0.8 482 chr2R 9212706 intergenic CR45309 + chr2R 9212947 intergenic CR45309 + chr2R 9213188 5` UTR CR45309 + chr2R_6_9210001 chr2R_9210001 RAL-83 404 chr2R 9279006 9279039 chr2R 9279108 9279141 13 100 3.5 3.0 3.2 3.1 135 chr2R 9279006 intron Pkn - chr2R 9279074 intron Pkn - chr2R 9279141 intron Pkn - chr2R_13_9275001 chr2R_9275001 RAL-83 405 chr2R 9368126 9368154 chr2R 9368202 9368230 7 76 2.0 0.5 1.2 3.2 104 chr2R 9368126 intron CG13954 - chr2R 9368178 intron CG13954 - chr2R 9368230 intron CG13954 - chr2R_7_9365001 chr2R_9365001 RAL-83 406 chr2R 9461243 9461259 chr2R 9461332 9461348 5 86 4.5 9.5 7.0 0.6 105 chr2R 9461243 intron Camta + chr2R 9461296 intron Camta + chr2R 9461348 intron Camta + chr2R_5_9460001 chr2R_9460001 RAL-83 407 chr2R 9553243 9553251 chr2R 9553322 9553330 4 78 11.5 5.5 8.5 0.4 87 chr2R 9553243 5` UTR CR43651 + chr2R 9553286 5` UTR CR43651 + chr2R 9553330 5` UTR CR43651 + chr2R_4_9550001 chr2R_9550001 RAL-83 408 chr2R 9650248 9650277 chr2R 9650330 9650357 7 79 3.0 1.0 2.0 2.3 109 chr2R 9650248 intron Mmp2 - chr2R 9650302 intron Mmp2 - chr2R 9650357 intron Mmp2 - chr2R_7_9650001 chr2R_9650001 RAL-83 409 chr2R 9699430 9699440 chr2R 9699501 9699527 5 84 9.0 4.5 6.8 0.6 97 chr2R 9699430 intergenic not near genes chr2R 9699478 intergenic not near genes chr2R 9699527 intergenic not near genes chr2R_5_9695001 chr2R_9695001 RAL-83 410 chr2R 9726611 9726643 chr2R 9734162 9734194 17.6 4 7551 1.5 0.0 0.8 2.2 7583 chr2R 9726611 intron sqa - chr2R 9730402 intron sqa - chr2R 9734194 intron sqa - chr2R_4_9730001 chr2R_9730001 RAL-83 411 chr2R 9782447 9782475 chr2R 9782535 9782558 7 87 1.0 1.0 1.0 3.5 111 chr2R 9782447 intron CG1688 - chr2R 9782502 intron CG1688 - chr2R 9782558 intron CG1688 - chr2R_7_9780001 chr2R_9780001 RAL-83 412 chr2R 9850508 9850534 chr2R 9850586 9850612 4 78 4.0 2.0 3.0 1.0 104 chr2R 9850508 exon CG1671 + chr2R 9850560 3` UTR CG1671 + chr2R 9850612 3` UTR CG1671 + chr2R_4_9850001 chr2R_9850001 RAL-83 413 chr2R 9871039 9871074 chr2R 9871525 9871540 roo 8 482 2.0 3.5 2.8 2.1 501 chr2R 9871039 intron cbx - chr2R 9871290 intron cbx - chr2R 9871540 intron,5` UTR cbx -,CG18446 + chr2R_8_9870001 chr2R_9870001 RAL-83 414 chr2R 9923859 9923882 chr2R 9923938 9923959 5 80 5.0 3.0 4.0 1.0 100 chr2R 9923859 intron Mef2 - chr2R 9923909 intron Mef2 - chr2R 9923959 intron Mef2 - chr2R_5_9920001 chr2R_9920001 RAL-83 415 chr2R 9935027 9935052 chr2R 9935108 9935134 10 79 4.5 1.0 2.8 2.6 107 chr2R 9935027 intron Mef2 - chr2R 9935080 intron Mef2 - chr2R 9935134 intron Mef2 - chr2R_10_9935001 chr2R_9935001 RAL-83 416 chr2R 9945429 9945469 chr2R 9945625 9945665 BS 9 192 6.5 3.5 5.0 1.5 236 chr2R 9945429 intron Mef2 - chr2R 9945547 intron Mef2 - chr2R 9945665 intron Mef2 - chr2R_9_9945001 chr2R_9945001 RAL-83 417 chr2R 10005848 10005882 chr2R 10007013 10007021 1360 13 1159 4.0 4.0 4.0 2.6 1173 chr2R 10005848 intron Pka-R2 - chr2R 10006434 intron Pka-R2 - chr2R 10007021 intron Pka-R2 - chr2R_13_10005001 chr2R_10005001 RAL-83 418 chr2R 10010451 10010479 chr2R 10010567 10010590 10 110 3.5 4.0 3.8 2.1 139 chr2R 10010451 intron Pka-R2 - chr2R 10010520 intron Pka-R2 - chr2R 10010590 intron Pka-R2 - chr2R_10_10010001 chr2R_10010001 RAL-83 419 chr2R 10053522 10053539 chr2R 10053625 10053642 4 103 1.5 0.5 1.0 2.0 120 chr2R 10053522 intron magu + chr2R 10053582 intron magu + chr2R 10053642 intron magu + chr2R_4_10050001 chr2R_10050001 RAL-83 420 chr2R 10132201 10132209 chr2R 10132281 10132289 6 80 6.0 8.0 7.0 0.8 88 chr2R 10132201 intron gem + chr2R 10132245 intron gem + chr2R 10132289 intron gem + chr2R_6_10130001 chr2R_10130001 RAL-83 421 chr2R 10147641 10147673 chr2R 10147724 10147756 13 81 3.0 4.0 3.5 2.9 115 chr2R 10147641 intron KCNQ - chr2R 10147698 intron KCNQ - chr2R 10147756 intron KCNQ - chr2R_13_10145001 chr2R_10145001 RAL-83 422 chr2R 10168355 10168361 chr2R 10168432 10168438 5 76 5.0 4.5 4.8 0.9 83 chr2R 10168355 intron KCNQ - chr2R 10168396 intron KCNQ - chr2R 10168438 intron KCNQ - chr2R_5_10165001 chr2R_10165001 RAL-83 423 chr2R 10269564 10269594 chr2R 10269658 10269688 10 94 3.5 2.5 3.0 2.5 124 chr2R 10269564 intron CAP + chr2R 10269626 intron CAP + chr2R 10269688 intron CAP + chr2R_10_10265001 chr2R_10265001 RAL-83 424 chr2R 10303531 10303562 chr2R 10303631 10303662 8 99 1.5 3.5 2.5 2.3 131 chr2R 10303531 intron CAP + chr2R 10303596 intron CAP + chr2R 10303662 intron CAP + chr2R_8_10300001 chr2R_10300001 RAL-83 425 chr2R 10313343 10313353 chr2R 10313424 10313441 4 86 0.5 5.0 2.8 1.1 98 chr2R 10313343 intergenic not near genes chr2R 10313392 intergenic Ndg + chr2R 10313441 intergenic Ndg + chr2R_4_10310001 chr2R_10310001 RAL-83 426 chr2R 10318517 10318545 chr2R 10318603 10318631 4 86 0.5 3.0 1.8 1.4 114 chr2R 10318517 intron Ndg + chr2R 10318574 intron Ndg + chr2R 10318631 intron Ndg + chr2R_4_10315001 chr2R_10315001 RAL-83 427 chr2R 10319715 10319742 chr2R 10319807 10319834 6 92 6.0 3.5 4.8 1.0 119 chr2R 10319715 intron Ndg + chr2R 10319774 intron Ndg + chr2R 10319834 intron Ndg + chr2R_6_10315001 chr2R_10315001 RAL-83 428 chr2R 10352672 10352705 chr2R 10352749 10352765 12 74 0.5 1.5 1.0 6.0 93 chr2R 10352672 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352718 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352765 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_12_10350001 chr2R_10350001 RAL-83 429 chr2R 10369995 10370017 chr2R 10370112 10370135 4 119 2.0 2.0 2.0 1.3 140 chr2R 10369995 intron CG42732 - chr2R 10370065 intron CG42732 - chr2R 10370135 intron CG42732 - chr2R_4_10370001 chr2R_10370001 RAL-83 430 chr2R 10385237 10385256 chr2R 10385347 10385364 13 110 1.5 4.5 3.0 3.2 127 chr2R 10385237 intron CG42732 - chr2R 10385300 intron CG42732 - chr2R 10385364 intron CG42732 - chr2R_13_10385001 chr2R_10385001 RAL-83 431 chr2R 10387980 10388002 chr2R 10388071 10388098 7 95 0.5 1.0 0.8 3.9 118 chr2R 10387980 intron CG42732 - chr2R 10388039 intron CG42732 - chr2R 10388098 intron CG42732 - chr2R_7_10385001 chr2R_10385001 RAL-83 432 chr2R 10563278 10563571 chr2R 10563363 10563651 4 81 2.5 7.0 4.8 0.7 373 chr2R 10563278 intron psq + chr2R 10563464 intron psq + chr2R 10563651 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-83 433 chr2R 10565983 10566011 chr2R 10566369 10566397 11 384 5.5 1.0 3.2 2.6 414 chr2R 10565983 intron psq + chr2R 10566190 intron psq + chr2R 10566397 intron psq + chr2R_11_10565001 chr2R_10565001 RAL-83 434 chr2R 10582121 10582137 chr2R 10582216 10582232 4 95 1.0 0.0 0.5 2.7 111 chr2R 10582121 intron psq + chr2R 10582176 intron psq + chr2R 10582232 intron psq + chr2R_4_10580001 chr2R_10580001 RAL-83 435 chr2R 10585575 10585589 chr2R 10594152 10594172 Tirant 6 8581 2.0 5.5 3.8 1.2 8597 chr2R 10585575 intron psq + chr2R 10589874 intron psq + chr2R 10594172 intron psq + chr2R_6_10585001 chr2R_10585001 RAL-83 436 chr2R 10595659 10595811 chr2R 10595732 10595882 7 83 2.0 3.0 2.5 2.0 223 chr2R 10595659 intron psq + chr2R 10595770 intron psq + chr2R 10595882 intron psq + chr2R_7_10595001 chr2R_10595001 RAL-83 437 chr2R 10644065 10644087 chr2R 10644143 10644165 6 78 3.0 0.0 1.5 2.4 100 chr2R 10644065 intron Git - chr2R 10644115 intron Git - chr2R 10644165 intron Git - chr2R_6_10640001 chr2R_10640001 RAL-83 438 chr2R 10671250 10671288 chr2R 10671328 10671340 11 72 4.0 0.5 2.2 3.4 90 chr2R 10671250 intergenic not near genes chr2R 10671295 intergenic not near genes chr2R 10671340 intergenic not near genes chr2R_11_10670001 chr2R_10670001 RAL-83 439 chr2R 10737875 10737908 chr2R 10737954 10737987 10 76 3.5 6.5 5.0 1.7 112 chr2R 10737875 3` UTR CG7220 + chr2R 10737931 3` UTR CG7220 + chr2R 10737987 3` UTR CG7220 + chr2R_10_10735001 chr2R_10735001 RAL-83 440 chr2R 10742434 10742448 chr2R 10742618 10742632 7 181 3.0 3.0 3.0 1.8 198 chr2R 10742434 intron CG33144 - chr2R 10742533 intron CG33144 - chr2R 10742632 intron CG33144 - chr2R_7_10740001 chr2R_10740001 RAL-83 441 chr2R 10781399 10781424 chr2R 10781759 10781768 17 358 6.0 2.0 4.0 3.4 369 chr2R 10781399 intron CG33144 - chr2R 10781584 intron CG33144 - chr2R 10781768 intron CG33144 - chr2R_17_10780001 chr2R_10780001 RAL-83 442 chr2R 10948024 10948062 chr2R 10955575 10955601 17.6 14 7547 1.0 4.0 2.5 4.0 7577 chr2R 10948024 intergenic not near genes chr2R 10951812 intergenic not near genes chr2R 10955601 intergenic not near genes chr2R_14_10950001 chr2R_10950001 RAL-83 443 chr2R 11009813 11009844 chr2R 11018987 11019007 roo 8 9173 1.5 1.0 1.2 3.6 9194 chr2R 11009813 intron luna - chr2R 11014410 intron luna - chr2R 11019007 intron luna - chr2R_8_11010001 chr2R_11010001 RAL-83 444 chr2R 11019881 11019906 chr2R 11024947 11024964 jockey 9 5063 6.5 4.0 5.2 1.5 5083 chr2R 11019881 intron luna - chr2R 11022422 intron luna - chr2R 11024964 intron luna - chr2R_9_11020001 chr2R_11020001 RAL-83 445 chr2R 11032657 11032664 chr2R 11032751 11032758 4 94 2.5 6.0 4.2 0.8 101 chr2R 11032657 intron luna - chr2R 11032708 intron luna - chr2R 11032758 intron luna - chr2R_4_11030001 chr2R_11030001 RAL-83 446 chr2R 11102866 11102893 chr2R 11102948 11102975 10 80 5.0 0.0 2.5 2.9 109 chr2R 11102866 intron luna - chr2R 11102920 intron luna - chr2R 11102975 intron luna - chr2R_10_11100001 chr2R_11100001 RAL-83 447 chr2R 11207813 11207845 chr2R 11208006 11208038 BS 14 191 9.0 2.5 5.8 2.1 225 chr2R 11207813 intron shn + chr2R 11207926 intron shn + chr2R 11208038 intron shn + chr2R_14_11205001 chr2R_11205001 RAL-83 448 chr2R 11249191 11249198 chr2R 11249317 11249324 4 126 0.5 4.5 2.5 1.1 133 chr2R 11249191 intergenic CG43112 + chr2R 11249258 intergenic CG43112 + chr2R 11249324 intergenic CG43112 + chr2R_4_11245001 chr2R_11245001 RAL-83 449 chr2R 11415535 11415550 chr2R 11418671 11418699 opus 8 3143 4.0 4.0 4.0 1.6 3164 chr2R 11415535 intron Drip - chr2R 11417117 intron Drip - chr2R 11418699 intron Drip - chr2R_8_11415001 chr2R_11415001 RAL-83 450 chr2R 11472649 11472675 chr2R 11473845 11473870 pogo 13 1196 3.0 1.5 2.2 4.1 1221 chr2R 11472649 intergenic not near genes chr2R 11473260 intergenic not near genes chr2R 11473870 intergenic not near genes chr2R_13_11470001 chr2R_11470001 RAL-83 451 chr2R 11616172 11616202 chr2R 11616289 11616319 13 117 4.0 3.5 3.8 2.7 147 chr2R 11616172 intergenic CR43907 +,tou - chr2R 11616246 5` UTR CR43907 + chr2R 11616319 5` UTR CR43907 + chr2R_13_11615001 chr2R_11615001 RAL-83 452 chr2R 11663733 11663761 chr2R 11663836 11663858 12 99 4.0 3.5 3.8 2.5 125 chr2R 11663733 intron Roc2 - chr2R 11663796 intron Roc2 - chr2R 11663858 intron Roc2 - chr2R_12_11660001 chr2R_11660001 RAL-83 453 chr2R 8518780 8518804 chr2R 12066174 12066198 7 3547394 8.0 15.0 11.5 0.6 3547418 chr2R 8518780 intron mtt - chr2R 10292489 intron CAP + chr2R 12066198 intron CG8888 - chr2R_7_10290001 chr2R_10290001 RAL-83 454 chr2R 12146484 12146501 chr2R 12147591 12147622 5 1113 16.0 25.0 20.5 0.2 1138 chr2R 12146484 intron,3` UTR Hen1 +,CG8878 - chr2R 12147053 intron,exon Hen1 +,CG8878 - chr2R 12147622 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-83 455 chr2R 12145922 12145929 chr2R 12148615 12148626 4 2694 29.0 36.5 32.8 0.1 2704 chr2R 12145922 exon Hen1 + chr2R 12147274 intron,intron Hen1 +,CG8878 - chr2R 12148626 intron,exon Hen1 +,CG8878 - chr2R_4_12145001 chr2R_12145001 RAL-83 456 chr2R 12187471 12187508 chr2R 12190088 12190124 37 2622 106.0 75.0 90.5 0.4 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_37_12185001 chr2R_12185001 RAL-83 457 chr2R 12363380 12363417 chr2R 12363812 12363849 6 432 1.5 3.5 2.5 1.7 469 chr2R 12363380 intergenic CG30043 + chr2R 12363614 intergenic CG30043 + chr2R 12363849 intergenic not near genes chr2R_6_12360001 chr2R_12360001 RAL-83 458 chr2R 12385343 12385378 chr2R 12385424 12385459 10 81 0.5 1.0 0.8 5.6 116 chr2R 12385343 intergenic not near genes chr2R 12385401 intergenic not near genes chr2R 12385459 intergenic not near genes chr2R_10_12385001 chr2R_12385001 RAL-83 459 chr2R 12481150 12481168 chr2R 12482939 12482968 roo 5 1798 2.5 1.0 1.8 1.8 1818 chr2R 12481150 exon Dh44-R2 + chr2R 12482059 intron Dh44-R2 + chr2R 12482968 intron Dh44-R2 + chr2R_5_12480001 chr2R_12480001 RAL-83 460 chr2R 12501694 12501720 chr2R 12503854 12503876 Rt1c 8 2160 3.5 6.0 4.8 1.4 2182 chr2R 12501694 intron fdl - chr2R 12502785 intron fdl - chr2R 12503876 intron fdl - chr2R_8_12500001 chr2R_12500001 RAL-83 461 chr2R 12548543 12548552 chr2R 12548619 12548629 4 76 0.0 5.0 2.5 1.1 86 chr2R 12548543 intron fra + chr2R 12548586 intron fra + chr2R 12548629 intron fra + chr2R_4_12545001 chr2R_12545001 RAL-83 462 chr2R 12602814 12602831 chr2R 12602898 12602899 5 80 3.5 3.0 3.2 1.2 85 chr2R 12602814 intron Amph + chr2R 12602856 intron Amph + chr2R 12602899 intron Amph + chr2R_5_12600001 chr2R_12600001 RAL-83 463 chr2R 12643793 12643815 chr2R 12643869 12643892 7 74 1.5 5.0 3.2 1.7 99 chr2R 12643793 intron CG8785 - chr2R 12643842 intron CG8785 - chr2R 12643892 exon CG8785 - chr2R_7_12640001 chr2R_12640001 RAL-83 464 chr2R 12789302 12789320 chr2R 12797661 12797682 roo 6 8361 1.0 3.0 2.0 2.0 8380 chr2R 12789302 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797682 intron,3` UTR sca +,CR45137 - chr2R_6_12790001 chr2R_12790001 RAL-83 465 chr2R 12845416 12845427 chr2R 12845497 12845508 4 81 2.0 2.0 2.0 1.3 92 chr2R 12845416 intergenic CG17575 - chr2R 12845462 intergenic CG17575 - chr2R 12845508 intergenic CG17575 - chr2R_4_12845001 chr2R_12845001 RAL-83 466 chr2R 12897479 12897483 chr2R 12897554 12897573 4 87 4.0 0.0 2.0 1.3 94 chr2R 12897479 intron vg + chr2R 12897526 intron vg + chr2R 12897573 intron vg + chr2R_4_12895001 chr2R_12895001 RAL-83 467 chr2R 12908489 12908496 chr2R 12908572 12908579 5 83 1.0 2.0 1.5 2.0 90 chr2R 12908489 intergenic not near genes chr2R 12908534 intergenic not near genes chr2R 12908579 intergenic not near genes chr2R_5_12905001 chr2R_12905001 RAL-83 468 chr2R 12973432 12973448 chr2R 12973519 12973535 6 87 3.5 9.5 6.5 0.8 103 chr2R 12973432 intron Psc - chr2R 12973484 intron Psc - chr2R 12973535 intron Psc - chr2R_6_12970001 chr2R_12970001 RAL-83 469 chr2R 13136842 13136866 chr2R 13141639 13141660 Doc 7 4797 3.5 4.5 4.0 1.4 4818 chr2R 13136842 exon Cap-G + chr2R 13139251 intron Cap-G + chr2R 13141660 intron Cap-G + chr2R_7_13135001 chr2R_13135001 RAL-83 470 chr2R 13431489 13431516 chr2R 13431568 13431595 5 79 3.0 2.0 2.5 1.4 106 chr2R 13431489 intron CG42321 - chr2R 13431542 intron CG42321 - chr2R 13431595 intron CG42321 - chr2R_5_13430001 chr2R_13430001 RAL-83 471 chr2R 13438864 13438890 chr2R 13440183 13440208 11 1321 7.5 35.5 21.5 0.5 1344 chr2R 13438864 5` UTR CG42321 - chr2R 13439536 3` UTR cnn - chr2R 13440208 exon cnn - chr2R_11_13435001 chr2R_13435001 RAL-83 472 chr2R 13547086 13547104 chr2R 13547281 13547299 6 195 4.0 3.5 3.8 1.2 213 chr2R 13547086 intron CG6145 - chr2R 13547192 intron CG6145 - chr2R 13547299 intron CG6145 - chr2R_6_13545001 chr2R_13545001 RAL-83 473 chr2R 13554767 13554773 chr2R 13554851 13554858 6 85 0.0 5.0 2.5 1.7 91 chr2R 13554767 intron Roe1 + chr2R 13554812 intron Roe1 + chr2R 13554858 intron Roe1 + chr2R_6_13550001 chr2R_13550001 RAL-83 474 chr2R 13566266 13566291 chr2R 13566346 13566371 5 80 1.5 1.0 1.2 2.3 105 chr2R 13566266 intergenic not near genes chr2R 13566318 intergenic not near genes chr2R 13566371 intergenic not near genes chr2R_5_13565001 chr2R_13565001 RAL-83 475 chr2R 13573783 13573817 chr2R 13573953 13573986 11 168 5.5 3.5 4.5 2.0 203 chr2R 13573783 exon CG42808 - chr2R 13573884 exon CG42808 - chr2R 13573986 exon CG42808 - chr2R_11_13570001 chr2R_13570001 RAL-83 476 chr2R 13580501 13580532 chr2R 13580850 13580882 jockey 6 350 0.5 4.5 2.5 1.7 381 chr2R 13580501 3` UTR CG6191 - chr2R 13580692 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580882 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_6_13580001 chr2R_13580001 RAL-83 477 chr2R 13608277 13608301 chr2R 13608359 13608380 7 82 2.5 3.0 2.8 1.8 103 chr2R 13608277 intergenic CG12464 - chr2R 13608328 intergenic CG12464 - chr2R 13608380 intergenic CG12464 - chr2R_7_13605001 chr2R_13605001 RAL-83 478 chr2R 13697668 13697699 chr2R 13697748 13697775 10 79 1.0 5.5 3.2 2.4 107 chr2R 13697668 intron fas + chr2R 13697722 intron fas + chr2R 13697775 intron fas + chr2R_10_13695001 chr2R_13695001 RAL-83 479 chr2R 13752801 13752832 chr2R 13752900 13752930 4 98 1.5 0.5 1.0 2.0 129 chr2R 13752801 intergenic not near genes chr2R 13752866 intergenic not near genes chr2R 13752930 intergenic not near genes chr2R_4_13750001 chr2R_13750001 RAL-83 480 chr2R 13768978 13769010 chr2R 13769077 13769109 9 96 4.0 4.0 4.0 1.8 131 chr2R 13768978 intergenic not near genes chr2R 13769044 intergenic not near genes chr2R 13769109 intergenic not near genes chr2R_9_13765001 chr2R_13765001 RAL-83 481 chr2R 13905600 13905636 chr2R 13907582 13907585 Rt1a 16 1977 4.5 2.0 3.2 3.8 1985 chr2R 13905600 intron shot - chr2R 13906592 intron shot - chr2R 13907585 intron shot - chr2R_16_13905001 chr2R_13905001 RAL-83 482 chr2R 13925851 13925872 chr2R 13926027 13926048 7 174 3.0 2.0 2.5 2.0 197 chr2R 13925851 intron shot - chr2R 13925950 intron shot - chr2R 13926048 intron shot - chr2R_7_13925001 chr2R_13925001 RAL-83 483 chr2R 14014975 14014997 chr2R 14015769 14015791 5 794 2.5 3.0 2.8 1.3 816 chr2R 14014975 intron mam + chr2R 14015383 intron mam + chr2R 14015791 intron mam + chr2R_5_14015001 chr2R_14015001 RAL-83 484 chr2R 14277581 14277610 chr2R 14277663 14277692 8 82 2.5 1.0 1.8 2.9 111 chr2R 14277581 5` UTR Ih + chr2R 14277636 5` UTR Ih + chr2R 14277692 5` UTR Ih + chr2R_8_14275001 chr2R_14275001 RAL-83 485 chr2R 14312051 14312062 chr2R 14312523 14312534 7 472 4.0 5.5 4.8 1.2 483 chr2R 14312051 intron Shroom + chr2R 14312292 intron Shroom + chr2R 14312534 intron Shroom + chr2R_7_14310001 chr2R_14310001 RAL-83 486 chr2R 14378989 14379013 chr2R 14379453 14379476 8 463 5.0 6.0 5.5 1.2 487 chr2R 14378989 intron Dh44-R1 + chr2R 14379232 intron Dh44-R1 + chr2R 14379476 intron Dh44-R1 + chr2R_8_14375001 chr2R_14375001 RAL-83 487 chr2R 14394233 14394248 chr2R 14399022 14399037 Doc 4 4788 3.5 3.5 3.5 0.9 4804 chr2R 14394233 intergenic not near genes chr2R 14396635 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_4_14395001 chr2R_14395001 RAL-83 488 chr2R 14467291 14467327 chr2R 14476443 14476479 roo 11 9151 2.0 7.5 4.8 1.9 9188 chr2R 14467291 intergenic not near genes chr2R 14471885 intergenic not near genes chr2R 14476479 5` UTR CR44462 + chr2R_11_14470001 chr2R_14470001 RAL-83 489 chr2R 14530363 14530376 chr2R 14530452 14530465 7 88 5.0 4.5 4.8 1.2 102 chr2R 14530363 intron ttv + chr2R 14530414 intron ttv + chr2R 14530465 intron ttv + chr2R_7_14530001 chr2R_14530001 RAL-83 490 chr2R 14530747 14530775 chr2R 14530827 14530857 14 78 2.5 3.0 2.8 3.7 110 chr2R 14530747 intron ttv + chr2R 14530802 intron ttv + chr2R 14530857 intron ttv + chr2R_14_14530001 chr2R_14530001 RAL-83 491 chr2R 14566450 14566478 chr2R 14566533 14566564 9 86 2.0 2.5 2.2 2.8 114 chr2R 14566450 intron ttv + chr2R 14566507 intron ttv + chr2R 14566564 intron ttv + chr2R_9_14565001 chr2R_14565001 RAL-83 492 chr2R 14646150 14646173 chr2R 14647834 14647857 5 1678 3.5 10.0 6.8 0.6 1707 chr2R 14646150 3` UTR CG10139 + chr2R 14647004 intergenic not near genes chr2R 14647857 intergenic not near genes chr2R_5_14645001 chr2R_14645001 RAL-83 493 chr2R 14661146 14661176 chr2R 14661230 14661253 12 79 4.0 1.5 2.8 3.2 107 chr2R 14661146 intergenic not near genes chr2R 14661200 intergenic not near genes chr2R 14661253 intergenic not near genes chr2R_12_14660001 chr2R_14660001 RAL-83 494 chr2R 14681890 14681924 chr2R 14681977 14682011 8 86 3.0 3.0 3.0 2.0 121 chr2R 14681890 intron mspo - chr2R 14681950 intron mspo - chr2R 14682011 intron mspo - chr2R_8_14680001 chr2R_14680001 RAL-83 495 chr2R 14690740 14690759 chr2R 14690832 14690850 10 91 0.0 3.5 1.8 3.6 110 chr2R 14690740 intron mspo - chr2R 14690795 intron mspo - chr2R 14690850 intron mspo - chr2R_10_14690001 chr2R_14690001 RAL-83 496 chr2R 14911705 14911728 chr2R 14911828 14911851 8 123 2.0 2.0 2.0 2.7 146 chr2R 14911705 intron CG10249 - chr2R 14911778 intron CG10249 - chr2R 14911851 intron CG10249 - chr2R_8_14910001 chr2R_14910001 RAL-83 497 chr2R 15004727 15004759 chr2R 15005056 15005088 jockey 10 329 1.0 1.5 1.2 4.5 361 chr2R 15004727 intergenic not near genes chr2R 15004908 intergenic not near genes chr2R 15005088 intergenic not near genes chr2R_10_15000001 chr2R_15000001 RAL-83 498 chr2R 15015462 15015484 chr2R 15022886 15022908 mdg1 5 7423 4.5 4.0 4.2 1.0 7446 chr2R 15015462 intron hbs + chr2R 15019185 intron hbs + chr2R 15022908 intron hbs + chr2R_5_15015001 chr2R_15015001 RAL-83 499 chr2R 15065621 15065650 chr2R 15065697 15065728 6 73 2.0 4.0 3.0 1.5 107 chr2R 15065621 intergenic not near genes chr2R 15065674 intergenic not near genes chr2R 15065728 intergenic not near genes chr2R_6_15065001 chr2R_15065001 RAL-83 500 chr2R 15094883 15094917 chr2R 15094959 15094994 8 76 1.5 1.5 1.5 3.2 111 chr2R 15094883 intergenic not near genes chr2R 15094938 intergenic not near genes chr2R 15094994 intergenic not near genes chr2R_8_15090001 chr2R_15090001 RAL-83 501 chr2R 15117446 15117471 chr2R 15117539 15117565 8 91 2.5 6.0 4.2 1.5 119 chr2R 15117446 intron chn + chr2R 15117506 intron chn + chr2R 15117565 intron chn + chr2R_8_15115001 chr2R_15115001 RAL-83 502 chr2R 15119316 15119341 chr2R 15127797 15127802 Tirant 6 8478 5.0 2.5 3.8 1.2 8486 chr2R 15119316 intron chn + chr2R 15123559 intron chn + chr2R 15127802 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-83 503 chr2R 15137976 15137985 chr2R 15138052 15138064 5 78 4.0 0.0 2.0 1.7 88 chr2R 15137976 intron chn + chr2R 15138020 intron chn + chr2R 15138064 intron chn + chr2R_5_15135001 chr2R_15135001 RAL-83 504 chr2R 15152228 15152254 chr2R 15152353 15152379 4 124 4.5 2.5 3.5 0.9 151 chr2R 15152228 intergenic not near genes chr2R 15152304 intergenic not near genes chr2R 15152379 intergenic not near genes chr2R_4_15150001 chr2R_15150001 RAL-83 505 chr2R 15296169 15296362 chr2R 15296251 15296516 11 134 1.0 3.0 2.0 3.7 347 chr2R 15296169 intron Trpm - chr2R 15296342 intron Trpm - chr2R 15296516 intron Trpm - chr2R_11_15295001 chr2R_15295001 RAL-83 506 chr2R 15775881 15775901 chr2R 15776001 15776021 5 120 1.0 4.0 2.5 1.4 140 chr2R 15775881 intron Zasp52 - chr2R 15775951 intron Zasp52 - chr2R 15776021 intron Zasp52 - chr2R_5_15775001 chr2R_15775001 RAL-83 507 chr2R 15883316 15883346 chr2R 15883472 15883501 7 156 3.5 0.5 2.0 2.3 185 chr2R 15883316 intron sli - chr2R 15883408 intron sli - chr2R 15883501 intron sli - chr2R_7_15880001 chr2R_15880001 RAL-83 508 chr2R 16380123 16380152 chr2R 16380218 16380250 9 98 2.5 1.5 2.0 3.0 127 chr2R 16380123 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380186 3` UTR CR45317 - chr2R 16380250 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_9_16380001 chr2R_16380001 RAL-83 509 chr2R 16380509 16380529 chr2R 16380588 16380610 12 80 3.5 2.5 3.0 3.0 101 chr2R 16380509 intergenic CG43187 +,CR45317 -,CR45316 + chr2R 16380560 exon CG43187 + chr2R 16380610 exon CG43187 + chr2R_12_16380001 chr2R_16380001 RAL-83 510 chr2R 16571888 16571892 chr2R 16571983 16571984 5 94 0.0 4.5 2.2 1.6 96 chr2R 16571888 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16571984 intergenic CG4927 + chr2R_5_16570001 chr2R_16570001 RAL-83 511 chr2R 16617058 16617089 chr2R 16617137 16617164 8 78 4.5 1.0 2.8 2.1 106 chr2R 16617058 intron CG5065 + chr2R 16617111 intron CG5065 + chr2R 16617164 intron CG5065 + chr2R_8_16615001 chr2R_16615001 RAL-83 512 chr2R 16864165 16864194 chr2R 16864518 16864547 15 353 2.5 2.0 2.2 4.7 382 chr2R 16864165 intron Psi - chr2R 16864356 intron Psi - chr2R 16864547 intron Psi - chr2R_15_16860001 chr2R_16860001 RAL-83 513 chr2R 16962252 16962262 chr2R 16962329 16962333 6 75 6.0 7.0 6.5 0.8 81 chr2R 16962252 intergenic not near genes chr2R 16962292 intergenic not near genes chr2R 16962333 intergenic not near genes chr2R_6_16960001 chr2R_16960001 RAL-83 514 chr2R 17087463 17087499 chr2R 17087541 17087577 9 77 1.5 1.5 1.5 3.6 114 chr2R 17087463 5` UTR CG30460 - chr2R 17087520 5` UTR CG30460 - chr2R 17087577 5` UTR CG30460 - chr2R_9_17085001 chr2R_17085001 RAL-83 515 chr2R 17102699 17102731 chr2R 17102779 17102810 9 79 2.0 2.5 2.2 2.8 111 chr2R 17102699 5` UTR CG30456 + chr2R 17102754 5` UTR CG30456 + chr2R 17102810 5` UTR CG30456 + chr2R_9_17100001 chr2R_17100001 RAL-83 516 chr2R 17147244 17147267 chr2R 17152275 17152298 jockey 7 5030 4.0 6.5 5.2 1.1 5054 chr2R 17147244 intergenic not near genes chr2R 17149771 intergenic not near genes chr2R 17152298 intergenic not near genes chr2R_7_17145001 chr2R_17145001 RAL-83 517 chr2R 17161362 17161364 chr2R 17161561 17161571 5 205 3.5 0.0 1.8 1.8 209 chr2R 17161362 intergenic not near genes chr2R 17161466 intergenic not near genes chr2R 17161571 intergenic not near genes chr2R_5_17160001 chr2R_17160001 RAL-83 518 chr2R 17176355 17176383 chr2R 17182545 17182573 diver 6 6190 0.5 2.5 1.5 2.4 6218 chr2R 17176355 intergenic not near genes chr2R 17179464 intergenic not near genes chr2R 17182573 intergenic not near genes chr2R_6_17175001 chr2R_17175001 RAL-83 519 chr2R 17236506 17236541 chr2R 17241710 17241743 copia 9 5202 3.5 3.0 3.2 2.1 5237 chr2R 17236506 intron mbl + chr2R 17239124 intron mbl + chr2R 17241743 intron mbl + chr2R_9_17235001 chr2R_17235001 RAL-83 520 chr2R 17273110 17273127 chr2R 17273192 17273210 4 82 1.5 4.5 3.0 1.0 100 chr2R 17273110 intron mbl + chr2R 17273160 intron mbl + chr2R 17273210 intron mbl + chr2R_4_17270001 chr2R_17270001 RAL-83 521 chr2R 17381586 17381617 chr2R 17381674 17381705 8 87 1.5 1.5 1.5 3.2 119 chr2R 17381586 intergenic not near genes chr2R 17381646 intergenic not near genes chr2R 17381705 intergenic not near genes chr2R_8_17380001 chr2R_17380001 RAL-83 522 chr2R 17443775 17443803 chr2R 17443851 17443879 9 76 1.0 0.0 0.5 6.0 104 chr2R 17443775 intron EDTP - chr2R 17443827 intron EDTP - chr2R 17443879 intron EDTP - chr2R_9_17440001 chr2R_17440001 RAL-83 523 chr2R 17478853 17478866 chr2R 17478915 17478940 9 73 3.5 4.0 3.8 1.9 87 chr2R 17478853 3` UTR,intron CG43110 -,veil + chr2R 17478896 3` UTR,intron CG43110 -,veil + chr2R 17478940 3` UTR,intron CG43110 -,veil + chr2R_9_17475001 chr2R_17475001 RAL-83 524 chr2R 17556446 17556461 chr2R 17556531 17556546 7 85 0.5 3.5 2.0 2.3 100 chr2R 17556446 intergenic MESR4 + chr2R 17556496 intergenic MESR4 + chr2R 17556546 intergenic MESR4 +,Klp54D + chr2R_7_17555001 chr2R_17555001 RAL-83 525 chr2R 17616986 17617008 chr2R 17617063 17617086 8 78 2.0 2.5 2.2 2.5 100 chr2R 17616986 intron,3` UTR CG10936 -,CG44403 - chr2R 17617036 intron,3` UTR CG10936 -,CG44403 - chr2R 17617086 intron,3` UTR CG10936 -,CG44403 - chr2R_8_17615001 chr2R_17615001 RAL-83 526 chr2R 17629605 17629630 chr2R 17629684 17629709 8 79 3.5 2.5 3.0 2.0 104 chr2R 17629605 intron,intron CG10936 -,rhi - chr2R 17629657 intron,intron CG10936 -,rhi - chr2R 17629709 intron,intron CG10936 -,rhi - chr2R_8_17625001 chr2R_17625001 RAL-83 527 chr2R 17764425 17764454 chr2R 17764528 17764557 9 102 3.0 1.5 2.2 2.8 132 chr2R 17764425 3` UTR CG5009 + chr2R 17764491 3` UTR CG5009 + chr2R 17764557 intergenic CG5009 +,OstDelta - chr2R_9_17760001 chr2R_17760001 RAL-83 528 chr2R 17784027 17784051 chr2R 17784268 17784292 pogo 11 241 10.0 4.5 7.2 1.3 265 chr2R 17784027 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784292 intergenic mir-31a - chr2R_11_17780001 chr2R_17780001 RAL-83 529 chr2R 17846775 17846813 chr2R 17846859 17846897 13 83 4.0 3.5 3.8 2.7 122 chr2R 17846775 intron,5` UTR olf186-F +,olf186-M + chr2R 17846836 intron,5` UTR olf186-F +,olf186-M + chr2R 17846897 intron,5` UTR olf186-F +,olf186-M + chr2R_13_17845001 chr2R_17845001 RAL-83 530 chr2R 17918164 17918195 chr2R 17918241 17918271 6 74 3.5 0.0 1.8 2.1 107 chr2R 17918164 intron Elk + chr2R 17918218 intron Elk + chr2R 17918271 intron Elk + chr2R_6_17915001 chr2R_17915001 RAL-83 531 chr2R 17922680 17922709 chr2R 17922807 17922836 6 127 1.5 5.5 3.5 1.3 156 chr2R 17922680 intron Elk + chr2R 17922758 intron Elk + chr2R 17922836 intron Elk + chr2R_6_17920001 chr2R_17920001 RAL-83 532 chr2R 17982929 17982953 chr2R 17983013 17983038 10 85 1.5 4.5 3.0 2.5 109 chr2R 17982929 intron dpr13 - chr2R 17982984 intron dpr13 - chr2R 17983038 intron dpr13 - chr2R_10_17980001 chr2R_17980001 RAL-83 533 chr2R 18023163 18023196 chr2R 18023247 18023281 17 84 3.0 4.5 3.8 3.5 118 chr2R 18023163 intergenic not near genes chr2R 18023222 intergenic not near genes chr2R 18023281 intergenic not near genes chr2R_17_18020001 chr2R_18020001 RAL-83 534 chr2R 18127379 18127403 chr2R 18127498 18127520 7 116 3.0 3.5 3.2 1.7 141 chr2R 18127379 intron Spn55B + chr2R 18127450 intron Spn55B + chr2R 18127520 intron Spn55B + chr2R_7_18125001 chr2R_18125001 RAL-83 535 chr2R 18308284 18308318 chr2R 18308390 18308424 13 103 2.5 5.0 3.8 2.7 140 chr2R 18308284 intron sbb - chr2R 18308354 intron sbb - chr2R 18308424 intron sbb - chr2R_13_18305001 chr2R_18305001 RAL-83 536 chr2R 18314407 18314432 chr2R 18314485 18314489 8 75 0.5 2.5 1.5 3.2 82 chr2R 18314407 intron sbb - chr2R 18314448 intron sbb - chr2R 18314489 intron sbb - chr2R_8_18310001 chr2R_18310001 RAL-83 537 chr2R 18338427 18338459 chr2R 18338548 18338580 14 120 3.0 3.0 3.0 3.5 153 chr2R 18338427 intron sbb - chr2R 18338504 intron sbb - chr2R 18338580 intron sbb - chr2R_14_18335001 chr2R_18335001 RAL-83 538 chr2R 18412349 18412381 chr2R 18412462 18412495 11 111 2.0 1.5 1.8 3.9 146 chr2R 18412349 intron,intron imd -,Dp1 + chr2R 18412422 intron,intron imd -,Dp1 + chr2R 18412495 intron,intron imd -,Dp1 + chr2R_11_18410001 chr2R_18410001 RAL-83 539 chr2R 18528199 18528222 chr2R 18528279 18528306 12 79 1.5 2.5 2.0 4.0 107 chr2R 18528199 intron CG10924 + chr2R 18528252 intron CG10924 + chr2R 18528306 intron CG10924 + chr2R_12_18525001 chr2R_18525001 RAL-83 540 chr2R 18575154 18575160 chr2R 18575371 18575374 6 216 5.0 3.0 4.0 1.2 220 chr2R 18575154 intron GEFmeso - chr2R 18575264 intron GEFmeso - chr2R 18575374 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 RAL-83 541 chr2R 18575801 18575830 chr2R 18581983 18582018 3S18 14 6183 3.5 4.5 4.0 2.8 6217 chr2R 18575801 intron GEFmeso - chr2R 18578910 intron GEFmeso - chr2R 18582018 intron GEFmeso - chr2R_14_18575001 chr2R_18575001 RAL-83 542 chr2R 18590879 18590900 chr2R 18600031 18600052 roo 7 9152 4.5 6.0 5.2 1.1 9173 chr2R 18590879 intron GEFmeso - chr2R 18595466 intron GEFmeso - chr2R 18600052 intron GEFmeso - chr2R_7_18595001 chr2R_18595001 RAL-83 543 chr2R 18646414 18646437 chr2R 18646559 18646582 5 145 2.5 5.0 3.8 1.0 168 chr2R 18646414 intron SP2637 - chr2R 18646498 intron SP2637 - chr2R 18646582 intron SP2637 - chr2R_5_18645001 chr2R_18645001 RAL-83 544 chr2R 18692903 18692913 chr2R 18692990 18693000 5 87 5.0 2.0 3.5 1.1 97 chr2R 18692903 intron Sik3 + chr2R 18692952 intron Sik3 + chr2R 18693000 intron Sik3 + chr2R_5_18690001 chr2R_18690001 RAL-83 545 chr2R 18778212 18778231 chr2R 18778302 18778304 10 87 5.0 2.0 3.5 2.2 92 chr2R 18778212 intergenic not near genes chr2R 18778258 intergenic not near genes chr2R 18778304 intergenic not near genes chr2R_10_18775001 chr2R_18775001 RAL-83 546 chr2R 18785914 18785940 chr2R 18785992 18786018 10 79 5.0 2.0 3.5 2.2 104 chr2R 18785914 intron CG15080 + chr2R 18785966 intron CG15080 + chr2R 18786018 intron CG15080 + chr2R_10_18785001 chr2R_18785001 RAL-83 547 chr2R 18871645 18871680 chr2R 18871730 18871765 10 83 2.5 0.0 1.2 4.5 120 chr2R 18871645 intergenic not near genes chr2R 18871705 intergenic not near genes chr2R 18871765 intergenic not near genes chr2R_10_18870001 chr2R_18870001 RAL-83 548 chr2R 18953157 18953192 chr2R 18953244 18953267 11 84 0.5 0.5 0.5 7.3 110 chr2R 18953157 intron sano + chr2R 18953212 intron sano + chr2R 18953267 intron sano + chr2R_11_18950001 chr2R_18950001 RAL-83 549 chr2R 19017729 19017740 chr2R 19018663 19018692 5 938 2.0 21.5 11.8 0.4 963 chr2R 19017729 intergenic not near genes chr2R 19018210 intergenic not near genes chr2R 19018692 intergenic not near genes chr2R_5_19015001 chr2R_19015001 RAL-83 550 chr2R 19026051 19026061 chr2R 19026152 19026162 4 101 6.0 3.0 4.5 0.7 111 chr2R 19026051 intron 5-HT1B - chr2R 19026106 intron 5-HT1B - chr2R 19026162 intron 5-HT1B - chr2R_4_19025001 chr2R_19025001 RAL-83 551 chr2R 19213480 19213493 chr2R 19213623 19213637 6 143 5.0 6.5 5.8 0.9 157 chr2R 19213480 intron hppy + chr2R 19213558 intron hppy + chr2R 19213637 intron hppy + chr2R_6_19210001 chr2R_19210001 RAL-83 552 chr2R 19213496 19213509 chr2R 19213621 19213652 8 141 2.0 5.0 3.5 1.8 156 chr2R 19213496 intron hppy + chr2R 19213574 intron hppy + chr2R 19213652 intron hppy + chr2R_8_19210001 chr2R_19210001 RAL-83 553 chr2R 19300960 19300991 chr2R 19301043 19301074 10 83 3.5 3.0 3.2 2.4 114 chr2R 19300960 intron Tab2 + chr2R 19301017 intron Tab2 + chr2R 19301074 intron Tab2 + chr2R_10_19300001 chr2R_19300001 RAL-83 554 chr2R 19433131 19433164 chr2R 19433213 19433247 13 78 3.5 4.5 4.0 2.6 116 chr2R 19433131 exon Fak - chr2R 19433189 exon Fak - chr2R 19433247 exon Fak - chr2R_13_19430001 chr2R_19430001 RAL-83 555 chr2R 19588748 19588780 chr2R 19588826 19588858 5 75 0.5 4.0 2.2 1.6 110 chr2R 19588748 intron sm - chr2R 19588803 intron sm - chr2R 19588858 intron sm - chr2R_5_19585001 chr2R_19585001 RAL-83 556 chr2R 19602031 19602051 chr2R 19602109 19602136 5 83 7.0 2.0 4.5 0.9 105 chr2R 19602031 intron sm - chr2R 19602084 intron sm - chr2R 19602136 intron sm - chr2R_5_19600001 chr2R_19600001 RAL-83 557 chr2R 19776596 19776626 chr2R 19779917 19779948 jockey 6 3322 2.0 2.5 2.2 1.9 3352 chr2R 19776596 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779948 intergenic not near genes chr2R_6_19775001 chr2R_19775001 RAL-83 558 chr2R 19807675 19807693 chr2R 19807757 19807775 8 81 4.0 1.0 2.5 2.3 100 chr2R 19807675 intergenic not near genes chr2R 19807725 intergenic not near genes chr2R 19807775 intergenic not near genes chr2R_8_19805001 chr2R_19805001 RAL-83 559 chr2R 19914843 19914877 chr2R 19922255 19922256 mdg1 9 7408 3.5 2.0 2.8 2.4 7413 chr2R 19914843 intergenic not near genes chr2R 19918550 intergenic not near genes chr2R 19922256 intergenic not near genes chr2R_9_19915001 chr2R_19915001 RAL-83 560 chr2R 19957438 19957463 chr2R 19962638 19962650 copia 9 5196 2.5 3.0 2.8 2.4 5212 chr2R 19957438 intergenic CG44623 + chr2R 19960044 intergenic not near genes chr2R 19962650 intergenic not near genes chr2R_9_19960001 chr2R_19960001 RAL-83 561 chr2R 20008186 20008203 chr2R 20008267 20008292 5 87 2.0 3.0 2.5 1.4 106 chr2R 20008186 intergenic not near genes chr2R 20008239 intergenic not near genes chr2R 20008292 intergenic not near genes chr2R_5_20005001 chr2R_20005001 RAL-83 562 chr2R 20009496 20009528 chr2R 20009574 20009607 13 78 5.0 1.5 3.2 3.1 111 chr2R 20009496 intergenic not near genes chr2R 20009552 intergenic not near genes chr2R 20009607 intergenic not near genes chr2R_13_20005001 chr2R_20005001 RAL-83 563 chr2R 20035742 20035755 chr2R 20035853 20035872 7 116 5.0 2.5 3.8 1.5 130 chr2R 20035742 intergenic not near genes chr2R 20035807 intergenic not near genes chr2R 20035872 intergenic not near genes chr2R_7_20035001 chr2R_20035001 RAL-83 564 chr2R 20079866 20079870 chr2R 20079948 20079952 4 82 0.0 5.5 2.8 1.1 86 chr2R 20079866 intergenic not near genes chr2R 20079909 intergenic not near genes chr2R 20079952 intergenic not near genes chr2R_4_20075001 chr2R_20075001 RAL-83 565 chr2R 20174649 20174676 chr2R 20174725 20174752 6 72 5.0 3.0 4.0 1.2 103 chr2R 20174649 intergenic not near genes chr2R 20174700 intergenic not near genes chr2R 20174752 intergenic not near genes chr2R_6_20170001 chr2R_20170001 RAL-83 566 chr2R 20219429 20219460 chr2R 20219514 20219545 4 80 3.0 3.0 3.0 1.0 116 chr2R 20219429 intergenic not near genes chr2R 20219487 intergenic not near genes chr2R 20219545 intergenic not near genes chr2R_4_20215001 chr2R_20215001 RAL-83 567 chr2R 20223958 20223976 chr2R 20224043 20224061 4 85 2.0 0.0 1.0 2.0 103 chr2R 20223958 intergenic not near genes chr2R 20224010 intergenic not near genes chr2R 20224061 intergenic not near genes chr2R_4_20220001 chr2R_20220001 RAL-83 568 chr2R 20395173 20395196 chr2R 20395251 20395272 5 74 0.5 2.5 1.5 2.0 99 chr2R 20395173 intergenic not near genes chr2R 20395222 intergenic not near genes chr2R 20395272 intergenic not near genes chr2R_5_20395001 chr2R_20395001 RAL-83 569 chr2R 20405075 20405081 chr2R 20405158 20405165 4 85 7.5 2.5 5.0 0.7 90 chr2R 20405075 intergenic not near genes chr2R 20405120 intergenic not near genes chr2R 20405165 intergenic not near genes chr2R_4_20405001 chr2R_20405001 RAL-83 570 chr2R 20405092 20405107 chr2R 20405155 20405193 6 78 2.5 1.5 2.0 2.0 101 chr2R 20405092 intergenic not near genes chr2R 20405142 intergenic not near genes chr2R 20405193 intergenic not near genes chr2R_6_20405001 chr2R_20405001 RAL-83 571 chr2R 20418335 20418369 chr2R 20418436 20418470 11 101 0.5 2.0 1.2 5.0 135 chr2R 20418335 intergenic not near genes chr2R 20418402 intergenic not near genes chr2R 20418470 intergenic not near genes chr2R_11_20415001 chr2R_20415001 RAL-83 572 chr2R 20523038 20523069 chr2R 20523148 20523180 10 108 4.5 1.5 3.0 2.5 142 chr2R 20523038 intergenic not near genes chr2R 20523109 intergenic not near genes chr2R 20523180 intergenic not near genes chr2R_10_20520001 chr2R_20520001 RAL-83 573 chr2R 20601722 20601751 chr2R 20601805 20601830 6 83 1.0 1.5 1.2 2.7 108 chr2R 20601722 intron bl + chr2R 20601776 intron bl + chr2R 20601830 intron bl + chr2R_6_20600001 chr2R_20600001 RAL-83 574 chr2R 20731305 20731312 chr2R 20731397 20731403 7 92 2.5 0.0 1.2 3.2 98 chr2R 20731305 intron dpr + chr2R 20731354 intron dpr + chr2R 20731403 intron dpr + chr2R_7_20730001 chr2R_20730001 RAL-83 575 chr2R 20739449 20739476 chr2R 20744217 20744244 F-element 9 4767 3.0 5.0 4.0 1.8 4795 chr2R 20739449 intron dpr + chr2R 20741846 intron dpr + chr2R 20744244 intron dpr + chr2R_9_20740001 chr2R_20740001 RAL-83 576 chr2R 20760850 20760864 chr2R 20761110 20761136 5 270 0.0 0.5 0.2 4.2 286 chr2R 20760850 intergenic not near genes chr2R 20760993 intergenic not near genes chr2R 20761136 intergenic not near genes chr2R_5_20760001 chr2R_20760001 RAL-83 577 chr2R 20800521 20800536 chr2R 20800648 20800663 5 127 2.0 0.5 1.2 2.3 142 chr2R 20800521 intergenic not near genes chr2R 20800592 intergenic not near genes chr2R 20800663 intergenic not near genes chr2R_5_20800001 chr2R_20800001 RAL-83 578 chr2R 20962909 20962938 chr2R 20963007 20963036 9 98 1.5 2.5 2.0 3.0 127 chr2R 20962909 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963036 intergenic not near genes chr2R_9_20960001 chr2R_20960001 RAL-83 579 chr2R 21151116 21151146 chr2R 21153748 21153779 opus 6 2633 4.0 2.5 3.2 1.4 2663 chr2R 21151116 intron CG30389 - chr2R 21152448 intron CG30389 - chr2R 21153779 intron CG30389 - chr2R_6_21150001 chr2R_21150001 RAL-83 580 chr2R 21440661 21440662 chr2R 21440735 21440738 4 76 6.0 8.0 7.0 0.5 77 chr2R 21440661 intron Sdc - chr2R 21440700 intron Sdc - chr2R 21440738 intron Sdc - chr2R_4_21440001 chr2R_21440001 RAL-83 581 chr2R 21461465 21461489 chr2R 21461571 21461595 4 106 1.0 1.5 1.2 1.8 130 chr2R 21461465 intron Sdc - chr2R 21461530 intron Sdc - chr2R 21461595 intron Sdc - chr2R_4_21460001 chr2R_21460001 RAL-83 582 chr2R 21478048 21478075 chr2R 21478255 21478258 9 204 5.5 5.0 5.2 1.5 210 chr2R 21478048 intron Sdc - chr2R 21478153 intron Sdc - chr2R 21478258 intron Sdc - chr2R_9_21475001 chr2R_21475001 RAL-83 583 chr2R 21605928 21605932 chr2R 21606011 21606016 4 84 2.0 5.0 3.5 0.9 88 chr2R 21605928 3` UTR CG10433 - chr2R 21605972 3` UTR CG10433 - chr2R 21606016 3` UTR CG10433 - chr2R_4_21605001 chr2R_21605001 RAL-83 584 chr2R 21738287 21738308 chr2R 21747440 21747447 roo 8 9153 2.5 4.5 3.5 1.8 9160 chr2R 21738287 intergenic not near genes chr2R 21742867 intergenic not near genes chr2R 21747447 intergenic not near genes chr2R_8_21740001 chr2R_21740001 RAL-83 585 chr2R 21753084 21753109 chr2R 21753569 21753594 roo 6 485 4.5 4.0 4.2 1.2 510 chr2R 21753084 intergenic not near genes chr2R 21753339 intergenic not near genes chr2R 21753594 intergenic not near genes chr2R_6_21750001 chr2R_21750001 RAL-83 586 chr2R 21759581 21759590 chr2R 21759646 21759677 4 75 4.5 1.5 3.0 1.0 96 chr2R 21759581 intergenic not near genes chr2R 21759629 intergenic not near genes chr2R 21759677 intergenic not near genes chr2R_4_21755001 chr2R_21755001 RAL-83 587 chr2R 21809524 21809558 chr2R 21817764 21817796 roo 6 8239 2.5 3.0 2.8 1.6 8272 chr2R 21809524 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817796 intergenic not near genes chr2R_6_21810001 chr2R_21810001 RAL-83 588 chr2R 21906272 21906301 chr2R 21906373 21906402 7 101 2.0 3.0 2.5 2.0 130 chr2R 21906272 intron Fili + chr2R 21906337 intron Fili + chr2R 21906402 intron Fili + chr2R_7_21905001 chr2R_21905001 RAL-83 589 chr2R 21919891 21919907 chr2R 21919958 21919995 9 85 2.5 3.5 3.0 2.2 104 chr2R 21919891 intron Fili + chr2R 21919943 intron Fili + chr2R 21919995 intron Fili + chr2R_9_21915001 chr2R_21915001 RAL-83 590 chr2R 21993375 21993400 chr2R 21993464 21993490 5 87 1.5 1.0 1.2 2.3 115 chr2R 21993375 intron CG34370 - chr2R 21993432 intron CG34370 - chr2R 21993490 intron CG34370 - chr2R_5_21990001 chr2R_21990001 RAL-83 591 chr2R 22095961 22095995 chr2R 22096042 22096075 13 81 2.0 2.5 2.2 4.1 114 chr2R 22095961 intron CG11073 - chr2R 22096018 intron CG11073 - chr2R 22096075 intron CG11073 - chr2R_13_22095001 chr2R_22095001 RAL-83 592 chr2R 22185674 22185708 chr2R 22185773 22185807 6 94 1.5 0.0 0.8 3.3 133 chr2R 22185674 3` UTR MED16 + chr2R 22185740 3` UTR MED16 + chr2R 22185807 3` UTR MED16 + chr2R_6_22185001 chr2R_22185001 RAL-83 593 chr2R 22248842 22248870 chr2R 22248919 22248944 6 69 3.0 2.5 2.8 1.6 102 chr2R 22248842 intron dve + chr2R 22248893 intron dve + chr2R 22248944 intron dve + chr2R_6_22245001 chr2R_22245001 RAL-83 594 chr2R 22319080 22319110 chr2R 22321163 22321183 11 2080 3.5 2.5 3.0 2.8 2103 chr2R 22319080 intron,3` UTR Gp150 +,CR44756 - chr2R 22320132 intron,3` UTR Gp150 +,CR44756 - chr2R 22321183 intron Gp150 + chr2R_11_22320001 chr2R_22320001 RAL-83 595 chr2R 22349709 22349726 chr2R 22351473 22351484 jockey 7 1777 4.0 5.5 4.8 1.2 1775 chr2R 22349709 intron Liprin-gamma - chr2R 22350596 intron Liprin-gamma - chr2R 22351484 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-83 596 chr2R 22360388 22360393 chr2R 22360821 22360826 jockey 4 433 6.0 4.0 5.0 0.7 438 chr2R 22360388 intron Liprin-gamma - chr2R 22360607 intron Liprin-gamma - chr2R 22360826 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-83 597 chr2R 22397009 22397041 chr2R 22397185 22397217 8 175 1.0 3.0 2.0 2.7 208 chr2R 22397009 intron babos - chr2R 22397113 intron babos - chr2R 22397217 intron babos - chr2R_8_22395001 chr2R_22395001 RAL-83 598 chr2R 22455326 22455346 chr2R 22455655 22455677 7 328 2.5 6.0 4.2 1.3 351 chr2R 22455326 5` UTR CG10384 + chr2R 22455502 intron CG10384 + chr2R 22455677 intron CG10384 + chr2R_7_22455001 chr2R_22455001 RAL-83 599 chr2R 22460383 22460406 chr2R 22460460 22460485 6 78 2.0 3.0 2.5 1.7 102 chr2R 22460383 intron CG10384 + chr2R 22460434 intron CG10384 + chr2R 22460485 intron CG10384 + chr2R_6_22460001 chr2R_22460001 RAL-83 600 chr2R 22503871 22503893 chr2R 22504059 22504080 5 187 1.0 1.0 1.0 2.5 209 chr2R 22503871 intron px - chr2R 22503976 intron px - chr2R 22504080 intron px - chr2R_5_22500001 chr2R_22500001 RAL-83 601 chr2R 22525758 22525785 chr2R 22529313 22529340 jockey 5 3555 1.5 8.0 4.8 0.9 3582 chr2R 22525758 intron px - chr2R 22527549 intron px - chr2R 22529340 intron px - chr2R_5_22525001 chr2R_22525001 RAL-83 602 chr2R 22537445 22537466 chr2R 22537789 22537810 6 343 4.0 1.5 2.8 1.6 365 chr2R 22537445 intron px - chr2R 22537628 intron px - chr2R 22537810 intron px - chr2R_6_22535001 chr2R_22535001 RAL-83 603 chr2R 22545617 22545651 chr2R 22545696 22545730 7 79 2.0 0.5 1.2 3.2 113 chr2R 22545617 intron px - chr2R 22545674 intron px - chr2R 22545730 intron px - chr2R_7_22545001 chr2R_22545001 RAL-83 604 chr2R 22774964 22775002 chr2R 22775381 22775421 jockey 15 418 6.0 4.0 5.0 2.5 457 chr2R 22774964 intron CG42260 - chr2R 22775192 intron CG42260 - chr2R 22775421 intron CG42260 - chr2R_15_22775001 chr2R_22775001 RAL-83 605 chr2R 22785730 22785757 chr2R 22785808 22785835 4 78 1.5 0.5 1.0 2.0 105 chr2R 22785730 intron CG42260 - chr2R 22785782 intron CG42260 - chr2R 22785835 intron CG42260 - chr2R_4_22785001 chr2R_22785001 RAL-83 606 chr2R 22834269 22834283 chr2R 22836308 22836322 4 2040 16.0 5.5 10.8 0.3 2053 chr2R 22834269 exon CG30265 + chr2R 22835296 exon CG12490 + chr2R 22836322 intron CG12490 + chr2R_4_22835001 chr2R_22835001 RAL-83 607 chr2R 22951836 22951851 chr2R 22951922 22951937 6 86 2.0 1.0 1.5 2.4 101 chr2R 22951836 3` UTR CR32835 - chr2R 22951886 3` UTR CR32835 - chr2R 22951937 intron CR32835 - chr2R_6_22950001 chr2R_22950001 RAL-83 608 chr2R 23009559 23009590 chr2R 23009635 23009640 4 68 1.5 4.5 3.0 1.0 81 chr2R 23009559 intron twi + chr2R 23009600 intron twi + chr2R 23009640 intron twi + chr2R_4_23005001 chr2R_23005001 RAL-83 609 chr2R 23052657 23052686 chr2R 23052733 23052758 4 75 3.5 2.0 2.8 1.1 101 chr2R 23052657 intergenic not near genes chr2R 23052708 intergenic not near genes chr2R 23052758 intergenic not near genes chr2R_4_23050001 chr2R_23050001 RAL-83 610 chr2R 23155717 23155878 chr2R 23155803 23155954 7 82 3.0 2.5 2.8 1.8 237 chr2R 23155717 intron CG9899 + chr2R 23155836 intron CG9899 + chr2R 23155954 intron CG9899 + chr2R_7_23155001 chr2R_23155001 RAL-83 611 chr2R 23184289 23184297 chr2R 23184374 23184382 4 85 0.5 8.0 4.2 0.8 93 chr2R 23184289 intron,intron CG34371 -,CG13539 + chr2R 23184336 intron,intron CG34371 -,CG13539 + chr2R 23184382 intron,intron CG34371 -,CG13539 + chr2R_4_23180001 chr2R_23180001 RAL-83 612 chr2R 23219013 23219024 chr2R 23219246 23219262 6 237 4.0 0.0 2.0 2.0 249 chr2R 23219013 intergenic not near genes chr2R 23219138 intergenic not near genes chr2R 23219262 intergenic not near genes chr2R_6_23215001 chr2R_23215001 RAL-83 613 chr2R 23356276 23356306 chr2R 23356363 23356395 6 88 3.0 2.0 2.5 1.7 119 chr2R 23356276 3` UTR Rpi + chr2R 23356336 3` UTR Rpi + chr2R 23356395 3` UTR,3` UTR Rpi +,CG3500 - chr2R_6_23355001 chr2R_23355001 RAL-83 614 chr2R 23402610 23402640 chr2R 23407684 23407716 flea 6 5075 0.5 2.5 1.5 2.4 5106 chr2R 23402610 intergenic CG3520 - chr2R 23405163 intergenic not near genes chr2R 23407716 intergenic not near genes chr2R_6_23405001 chr2R_23405001 RAL-83 615 chr2R 23429222 23429233 chr2R 23429447 23429458 4 225 3.5 6.5 5.0 0.7 236 chr2R 23429222 intron CG9815 - chr2R 23429340 intron CG9815 - chr2R 23429458 intron CG9815 - chr2R_4_23425001 chr2R_23425001 RAL-83 616 chr2R 23429234 23429243 chr2R 23429435 23429453 5 214 2.0 4.5 3.2 1.2 219 chr2R 23429234 intron CG9815 - chr2R 23429344 intron CG9815 - chr2R 23429453 intron CG9815 - chr2R_5_23425001 chr2R_23425001 RAL-83 617 chr2R 23467561 23467580 chr2R 23468084 23468103 6 523 5.0 4.0 4.5 1.1 542 chr2R 23467561 intron CG43795 + chr2R 23467832 intron CG43795 + chr2R 23468103 intron CG43795 + chr2R_6_23465001 chr2R_23465001 RAL-83 618 chr2R 23468580 23468588 chr2R 23468696 23468702 5 115 3.5 1.5 2.5 1.4 122 chr2R 23468580 intron CG43795 + chr2R 23468641 intron CG43795 + chr2R 23468702 intron CG43795 + chr2R_5_23465001 chr2R_23465001 RAL-83 619 chr2R 23487449 23487467 chr2R 23487530 23487549 7 82 3.0 3.0 3.0 1.8 100 chr2R 23487449 intron CG43795 + chr2R 23487499 intron CG43795 + chr2R 23487549 intron CG43795 + chr2R_7_23485001 chr2R_23485001 RAL-83 620 chr2R 23653975 23654002 chr2R 23654050 23654078 11 75 1.5 1.0 1.2 5.0 103 chr2R 23653975 3` UTR retn + chr2R 23654026 3` UTR retn + chr2R 23654078 3` UTR retn + chr2R_11_23650001 chr2R_23650001 RAL-83 621 chr2R 23663372 23663406 chr2R 23663448 23663482 13 73 3.0 3.0 3.0 3.2 110 chr2R 23663372 intron Pde8 + chr2R 23663427 intron Pde8 + chr2R 23663482 intron Pde8 + chr2R_13_23660001 chr2R_23660001 RAL-83 622 chr2R 23722983 23723003 chr2R 23723058 23723079 6 76 3.0 0.0 1.5 2.4 96 chr2R 23722983 intron Sesn + chr2R 23723031 intron Sesn + chr2R 23723079 intron Sesn + chr2R_6_23720001 chr2R_23720001 RAL-83 623 chr2R 23784492 23784505 chr2R 23784553 23784583 4 74 2.5 2.0 2.2 1.2 91 chr2R 23784492 intron CG9850 - chr2R 23784538 intron CG9850 - chr2R 23784583 intron CG9850 - chr2R_4_23780001 chr2R_23780001 RAL-83 624 chr2R 23865828 23865860 chr2R 23865910 23865942 6 82 3.5 1.0 2.2 1.9 114 chr2R 23865828 intron CG5569 + chr2R 23865885 intron CG5569 + chr2R 23865942 intron CG5569 + chr2R_6_23865001 chr2R_23865001 RAL-83 625 chr2R 23886695 23886719 chr2R 23886778 23886779 4 78 6.0 2.5 4.2 0.8 84 chr2R 23886695 intergenic CG5597 + chr2R 23886737 intergenic CG5597 + chr2R 23886779 intergenic CG5597 + chr2R_4_23885001 chr2R_23885001 RAL-83 626 chr2R 23914320 23914329 chr2R 23921942 23921953 412 5 7624 5.5 3.0 4.2 1.0 7633 chr2R 23914320 exon kcc + chr2R 23918136 intron kcc + chr2R 23921953 intron kcc + chr2R_5_23915001 chr2R_23915001 RAL-83 627 chr2R 23986516 23986547 chr2R 23986596 23986627 8 77 2.0 3.5 2.8 2.1 111 chr2R 23986516 intron Phm - chr2R 23986572 intron Phm - chr2R 23986627 intron,5` UTR Phm -,CG30178 + chr2R_8_23985001 chr2R_23985001 RAL-83 628 chr2R 24147068 24147097 chr2R 24154645 24154675 412 10 7576 5.5 6.0 5.8 1.5 7607 chr2R 24147068 intron Dat + chr2R 24150872 intron Dat + chr2R 24154675 intron Dat + chr2R_10_24150001 chr2R_24150001 RAL-83 629 chr2R 24321138 24321165 chr2R 24321236 24321241 9 95 3.5 3.5 3.5 2.0 103 chr2R 24321138 intergenic not near genes chr2R 24321190 intergenic not near genes chr2R 24321241 intergenic not near genes chr2R_9_24320001 chr2R_24320001 RAL-83 630 chr2R 24353427 24353462 chr2R 24361789 24361823 roo 11 8360 2.5 5.0 3.8 2.3 8396 chr2R 24353427 intron,intron bs +,CR44811 - chr2R 24357625 intron,intron bs +,CR44811 - chr2R 24361823 intron,intron bs +,CR44811 - chr2R_11_24355001 chr2R_24355001 RAL-83 631 chr2R 24383826 24383857 chr2R 24383906 24383933 10 79 2.0 4.5 3.2 2.4 107 chr2R 24383826 intron mAChR-A - chr2R 24383880 intron mAChR-A - chr2R 24383933 exon mAChR-A - chr2R_10_24380001 chr2R_24380001 RAL-83 632 chr2R 24430920 24430943 chr2R 24431008 24431031 7 88 0.0 1.5 0.8 3.9 111 chr2R 24430920 intergenic CG15873 -,Pgam5-2 - chr2R 24430976 intergenic CG15873 -,Pgam5-2 - chr2R 24431031 intergenic Pgam5-2 -,CG15873 - chr2R_7_24430001 chr2R_24430001 RAL-83 633 chr2R 24444288 24444309 chr2R 24444420 24444441 8 132 1.5 6.0 3.8 1.7 153 chr2R 24444288 intergenic not near genes chr2R 24444364 intergenic not near genes chr2R 24444441 intergenic not near genes chr2R_8_24440001 chr2R_24440001 RAL-83 634 chr2R 24470369 24470393 chr2R 24470464 24470485 10 94 1.0 3.5 2.2 3.1 116 chr2R 24470369 intron CG13579 + chr2R 24470427 intron CG13579 + chr2R 24470485 intron CG13579 + chr2R_10_24470001 chr2R_24470001 RAL-83 635 chr2R 24647589 24647618 chr2R 24655146 24655175 412 4 7557 4.5 6.0 5.2 0.6 7586 chr2R 24647589 intergenic not near genes chr2R 24651382 intergenic not near genes chr2R 24655175 intergenic not near genes chr2R_4_24650001 chr2R_24650001 RAL-83 636 chr2R 24727889 24727917 chr2R 24735397 24735406 mdg1 5 7504 1.0 7.0 4.0 1.0 7517 chr2R 24727889 intron Mid1 - chr2R 24731648 intron Mid1 - chr2R 24735406 intron Mid1 - chr2R_5_24730001 chr2R_24730001 RAL-83 637 chr2R 24763608 24763643 chr2R 24765584 24765619 G2 8 1974 3.0 5.0 4.0 1.6 2011 chr2R 24763608 exon CG3894 + chr2R 24764614 intron CG3894 + chr2R 24765619 exon CG3894 + chr2R_8_24760001 chr2R_24760001 RAL-83 638 chr2R 24767997 24768022 chr2R 24768081 24768094 7 83 2.5 3.0 2.8 1.8 97 chr2R 24767997 5` UTR GstE12 - chr2R 24768046 5` UTR GstE12 - chr2R 24768094 5` UTR GstE12 - chr2R_7_24765001 chr2R_24765001 RAL-83 639 chr2R 24848653 24848681 chr2R 24848737 24848749 7 81 1.0 5.5 3.2 1.7 96 chr2R 24848653 intergenic CG3650 + chr2R 24848701 intergenic CG3650 + chr2R 24848749 intergenic CG3650 + chr2R_7_24845001 chr2R_24845001 RAL-83 640 chr2R 25061340 25061366 chr2R 25061423 25061449 9 83 3.5 4.0 3.8 1.9 109 chr2R 25061340 intergenic not near genes chr2R 25061394 intergenic not near genes chr2R 25061449 intergenic not near genes chr2R_9_25060001 chr2R_25060001 RAL-83 641 chr2R 25101283 25101298 chr2R 25101384 25101398 4 101 3.0 1.5 2.2 1.2 115 chr2R 25101283 intron lov - chr2R 25101340 intron lov - chr2R 25101398 intron lov - chr2R_4_25100001 chr2R_25100001 RAL-83 642 chr2R 25131010 25131037 chr2R 25131087 25131114 7 76 1.5 3.5 2.5 2.0 104 chr2R 25131010 intron lov - chr2R 25131062 intron lov - chr2R 25131114 intron lov - chr2R_7_25130001 chr2R_25130001 RAL-83 643 chr2R 25141648 25141672 chr2R 25159338 25159362 roo 4 17690 4.5 0.5 2.5 1.1 17714 chr2R 25141648 intergenic not near genes chr2R 25150505 intergenic not near genes chr2R 25159362 intergenic not near genes chr2R_4_25150001 chr2R_25150001 RAL-83 644 chr2R 25243978 25244010 chr2R 25244054 25244088 4 77 0.5 0.0 0.2 3.3 110 chr2R 25243978 intron CG9380 - chr2R 25244033 intron CG9380 - chr2R 25244088 intron CG9380 - chr2R_4_25240001 chr2R_25240001 RAL-83 645 chr2R 25253461 25253474 chr2R 25253527 25253550 7 75 4.0 3.5 3.8 1.5 89 chr2R 25253461 intron,intron CG9380 -,CG30428 + chr2R 25253506 intron,intron CG9380 -,CG30428 + chr2R 25253550 intron,intron CG9380 -,CG30428 + chr2R_7_25250001 chr2R_25250001 RAL-83 646 chr3L 86466 86488 chr3L 86540 86565 5 78 2.5 0.5 1.5 2.0 99 chr3L 86466 intergenic not near genes chr3L 86516 intergenic not near genes chr3L 86565 intergenic not near genes chr3L_5_85001 chr3L_85001 RAL-83 647 chr3L 108949 108980 chr3L 109028 109059 6 79 3.5 3.5 3.5 1.3 110 chr3L 108949 intergenic not near genes chr3L 109004 intergenic not near genes chr3L 109059 intergenic not near genes chr3L_6_105001 chr3L_105001 RAL-83 648 chr3L 110215 110245 chr3L 119382 119412 roo 5 9167 3.5 1.5 2.5 1.4 9197 chr3L 110215 intergenic not near genes chr3L 114814 intergenic not near genes chr3L 119412 intergenic not near genes chr3L_5_110001 chr3L_110001 RAL-83 649 chr3L 135463 135493 chr3L 135534 135566 8 63 4.5 3.5 4.0 1.6 103 chr3L 135463 exon Pdk1 + chr3L 135514 exon Pdk1 + chr3L 135566 exon Pdk1 + chr3L_8_135001 chr3L_135001 RAL-83 650 chr3L 339457 339472 chr3L 339540 339554 5 83 0.0 4.5 2.2 1.6 97 chr3L 339457 intron,intron Ptpmeg +,mthl10 - chr3L 339506 intron,intron Ptpmeg +,mthl10 - chr3L 339554 intron,intron Ptpmeg +,mthl10 - chr3L_5_335001 chr3L_335001 RAL-83 651 chr3L 349390 349412 chr3L 349478 349500 13 87 8.0 5.5 6.8 1.7 110 chr3L 349390 intron Ptpmeg + chr3L 349445 intron Ptpmeg + chr3L 349500 intron Ptpmeg + chr3L_13_345001 chr3L_345001 RAL-83 652 chr3L 369863 369884 chr3L 369944 369965 5 81 3.5 1.0 2.2 1.6 102 chr3L 369863 intron trh - chr3L 369914 intron trh - chr3L 369965 intron trh - chr3L_5_365001 chr3L_365001 RAL-83 653 chr3L 390961 390986 chr3L 391066 391090 9 105 2.5 4.0 3.2 2.1 129 chr3L 390961 intron trh - chr3L 391026 intron trh - chr3L 391090 intron trh - chr3L_9_390001 chr3L_390001 RAL-83 654 chr3L 393177 393198 chr3L 393276 393297 7 98 4.5 0.0 2.2 2.2 120 chr3L 393177 3` UTR CR45378 - chr3L 393237 3` UTR CR45378 - chr3L 393297 intergenic CR45378 -,CR43969 + chr3L_7_390001 chr3L_390001 RAL-83 655 chr3L 402694 402704 chr3L 409747 409757 297 4 7051 11.0 4.5 7.8 0.5 7063 chr3L 402694 intergenic not near genes chr3L 406226 intergenic not near genes chr3L 409757 intergenic not near genes chr3L_4_405001 chr3L_405001 RAL-83 656 chr3L 402706 402718 chr3L 409742 409762 297 4 7044 8.0 4.0 6.0 0.6 7056 chr3L 402706 intergenic not near genes chr3L 406234 intergenic not near genes chr3L 409762 intergenic not near genes chr3L_4_405001 chr3L_405001 RAL-83 657 chr3L 428191 428207 chr3L 428311 428313 5 118 0.5 0.0 0.2 4.2 122 chr3L 428191 intergenic not near genes chr3L 428252 intergenic not near genes chr3L 428313 intergenic not near genes chr3L_5_425001 chr3L_425001 RAL-83 658 chr3L 456208 456239 chr3L 456287 456318 8 79 3.5 2.0 2.8 2.1 110 chr3L 456208 intron klar - chr3L 456263 intron klar - chr3L 456318 intron klar - chr3L_8_455001 chr3L_455001 RAL-83 659 chr3L 477889 477900 chr3L 477972 477982 6 83 7.0 0.5 3.8 1.2 93 chr3L 477889 intron klar - chr3L 477936 intron klar - chr3L 477982 intron klar - chr3L_6_475001 chr3L_475001 RAL-83 660 chr3L 563976 563998 chr3L 564148 564173 8 177 2.5 3.5 3.0 2.0 197 chr3L 563976 intron hipk + chr3L 564074 intron hipk + chr3L 564173 intron hipk + chr3L_8_560001 chr3L_560001 RAL-83 661 chr3L 606900 606922 chr3L 606976 607001 5 78 0.0 0.0 0.0 5.0 101 chr3L 606900 intergenic Reg-2 - chr3L 606950 intergenic Reg-2 - chr3L 607001 intergenic Reg-2 - chr3L_5_605001 chr3L_605001 RAL-83 662 chr3L 642468 642499 chr3L 642559 642590 6 91 3.5 5.5 4.5 1.1 122 chr3L 642468 5` UTR CR43334 + chr3L 642529 5` UTR CR43334 + chr3L 642590 5` UTR CR43334 + chr3L_6_640001 chr3L_640001 RAL-83 663 chr3L 701140 701168 chr3L 701232 701259 7 92 3.0 3.5 3.2 1.7 119 chr3L 701140 intergenic not near genes chr3L 701200 intergenic not near genes chr3L 701259 intergenic not near genes chr3L_7_700001 chr3L_700001 RAL-83 664 chr3L 705897 705935 chr3L 705993 706031 12 91 0.5 2.0 1.2 5.5 134 chr3L 705897 intergenic CG13895 -,CR44514 + chr3L 705964 3` UTR CG13895 - chr3L 706031 3` UTR CG13895 - chr3L_12_705001 chr3L_705001 RAL-83 665 chr3L 717904 717913 chr3L 717993 718002 4 89 0.0 5.0 2.5 1.1 98 chr3L 717904 intergenic not near genes chr3L 717953 intergenic not near genes chr3L 718002 intergenic not near genes chr3L_4_715001 chr3L_715001 RAL-83 666 chr3L 734987 735000 chr3L 735084 735113 4 109 2.5 3.0 2.8 1.1 126 chr3L 734987 intergenic not near genes chr3L 735050 intergenic not near genes chr3L 735113 intergenic not near genes chr3L_4_735001 chr3L_735001 RAL-83 667 chr3L 789917 789946 chr3L 790402 790431 roo 7 485 1.0 5.0 3.0 1.8 514 chr3L 789917 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790431 intergenic not near genes chr3L_7_790001 chr3L_790001 RAL-83 668 chr3L 866884 866897 chr3L 867101 867111 5 215 7.0 2.0 4.5 0.9 227 chr3L 866884 intron CG12502 + chr3L 866998 intron CG12502 + chr3L 867111 intron CG12502 + chr3L_5_865001 chr3L_865001 RAL-83 669 chr3L 875660 875686 chr3L 875747 875772 10 86 3.0 5.0 4.0 2.0 112 chr3L 875660 intron CG32479 + chr3L 875716 intron CG32479 + chr3L 875772 intron CG32479 + chr3L_10_875001 chr3L_875001 RAL-83 670 chr3L 925178 925198 chr3L 932604 932624 mdg1 9 7426 7.5 6.0 6.8 1.2 7446 chr3L 925178 intron Glut1 + chr3L 928901 intron Glut1 + chr3L 932624 intron Glut1 + chr3L_9_925001 chr3L_925001 RAL-83 671 chr3L 925092 925123 chr3L 932894 932925 mdg1 14 7803 24.5 24.5 24.5 0.5 7833 chr3L 925092 intron Glut1 + chr3L 929008 intron Glut1 + chr3L 932925 intron Glut1 + chr3L_14_925001 chr3L_925001 RAL-83 672 chr3L 933910 933944 chr3L 934013 934022 12 99 1.5 3.5 2.5 3.4 112 chr3L 933910 intron Glut1 + chr3L 933966 intron Glut1 + chr3L 934022 intron Glut1 + chr3L_12_930001 chr3L_930001 RAL-83 673 chr3L 939783 939791 chr3L 940897 940912 jockey 4 1119 4.0 3.5 3.8 0.8 1129 chr3L 939783 intron Glut1 + chr3L 940348 intron Glut1 + chr3L 940912 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-83 674 chr3L 1010998 1011026 chr3L 1011079 1011107 8 78 2.0 4.0 3.0 2.0 109 chr3L 1010998 intron trio - chr3L 1011052 intron trio - chr3L 1011107 intron trio - chr3L_8_1010001 chr3L_1010001 RAL-83 675 chr3L 1021376 1021397 chr3L 1021456 1021477 13 78 8.0 6.0 7.0 1.6 101 chr3L 1021376 intron trio - chr3L 1021426 intron trio - chr3L 1021477 intron trio - chr3L_13_1020001 chr3L_1020001 RAL-83 676 chr3L 1047350 1047380 chr3L 1055162 1055168 412 9 7804 4.5 2.5 3.5 2.0 7818 chr3L 1047350 intron bab1 - chr3L 1051259 intron bab1 - chr3L 1055168 intron bab1 - chr3L_9_1050001 chr3L_1050001 RAL-83 677 chr3L 1154132 1154158 chr3L 1163282 1163308 roo 5 9149 1.5 2.0 1.8 1.8 9176 chr3L 1154132 intron bab2 - chr3L 1158720 intron bab2 - chr3L 1163308 intron bab2 - chr3L_5_1155001 chr3L_1155001 RAL-83 678 chr3L 1219616 1219623 chr3L 1227331 1227356 412 5 7728 6.0 5.5 5.8 0.7 7740 chr3L 1219616 intron mwh + chr3L 1223486 intron mwh + chr3L 1227356 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-83 679 chr3L 1228245 1228278 chr3L 1228327 1228360 7 81 3.5 0.0 1.8 2.5 115 chr3L 1228245 intron mwh + chr3L 1228302 intron mwh + chr3L 1228360 intron mwh + chr3L_7_1225001 chr3L_1225001 RAL-83 680 chr3L 1257634 1257657 chr3L 1257713 1257736 5 79 0.0 1.5 0.8 2.8 102 chr3L 1257634 intron CG9134 + chr3L 1257685 intron CG9134 + chr3L 1257736 intron CG9134 + chr3L_5_1255001 chr3L_1255001 RAL-83 681 chr3L 1265086 1265119 chr3L 1265170 1265203 10 81 2.0 1.0 1.5 4.0 117 chr3L 1265086 intron CG9134 + chr3L 1265144 intron CG9134 + chr3L 1265203 intron CG9134 + chr3L_10_1265001 chr3L_1265001 RAL-83 682 chr3L 1310982 1310997 chr3L 1315852 1315874 11 4866 34.5 37.5 36.0 0.3 4892 chr3L 1310982 exon CG2469 + chr3L 1313428 intergenic CG9186 -,CG9153 + chr3L 1315874 exon CG9153 + chr3L_11_1310001 chr3L_1310001 RAL-83 683 chr3L 1321566 1321589 chr3L 1321766 1321789 6 200 3.5 1.5 2.5 1.7 223 chr3L 1321566 intron Myo61F + chr3L 1321678 intron Myo61F + chr3L 1321789 intron Myo61F + chr3L_6_1320001 chr3L_1320001 RAL-83 684 chr3L 1347157 1347191 chr3L 1347241 1347276 12 83 5.0 4.5 4.8 2.1 119 chr3L 1347157 intron Ptp61F - chr3L 1347216 intron Ptp61F - chr3L 1347276 intron Ptp61F - chr3L_12_1345001 chr3L_1345001 RAL-83 685 chr3L 1385186 1385208 chr3L 1385274 1385296 5 88 1.5 5.0 3.2 1.2 110 chr3L 1385186 intron,intron Ptp61F -,ru + chr3L 1385241 intron,intron Ptp61F -,ru + chr3L 1385296 intron,intron Ptp61F -,ru + chr3L_5_1385001 chr3L_1385001 RAL-83 686 chr3L 1415773 1415807 chr3L 1415855 1415875 19 77 2.5 2.0 2.2 5.9 102 chr3L 1415773 intron Ptp61F - chr3L 1415824 intron Ptp61F - chr3L 1415875 intron Ptp61F - chr3L_19_1415001 chr3L_1415001 RAL-83 687 chr3L 1463423 1463448 chr3L 1463504 1463528 12 75 3.5 5.0 4.2 2.3 105 chr3L 1463423 intron Ptp61F - chr3L 1463476 intron Ptp61F - chr3L 1463528 intron Ptp61F - chr3L_12_1460001 chr3L_1460001 RAL-83 688 chr3L 1505998 1506024 chr3L 1513595 1513621 17.6 7 7592 3.5 3.0 3.2 1.7 7623 chr3L 1505998 intron,intron Psa +,cue - chr3L 1509810 intron,intron Psa +,cue - chr3L 1513621 intron,intron Psa +,cue - chr3L_7_1505001 chr3L_1505001 RAL-83 689 chr3L 1537061 1537085 chr3L 1537147 1537171 7 86 1.0 8.0 4.5 1.3 110 chr3L 1537061 intergenic CG7852 +,CG12091 - chr3L 1537116 intergenic CG7852 +,CG12091 - chr3L 1537171 5` UTR CG7852 + chr3L_7_1535001 chr3L_1535001 RAL-83 690 chr3L 1639217 1639242 chr3L 1639398 1639421 6 179 1.0 1.0 1.0 3.0 204 chr3L 1639217 5` UTR metl - chr3L 1639319 intergenic metl -,Bgb + chr3L 1639421 intergenic metl -,Bgb + chr3L_6_1635001 chr3L_1635001 RAL-83 691 chr3L 1673587 1673592 chr3L 1673669 1673674 5 82 7.5 4.5 6.0 0.7 87 chr3L 1673587 intergenic not near genes chr3L 1673630 intergenic not near genes chr3L 1673674 intergenic not near genes chr3L_5_1670001 chr3L_1670001 RAL-83 692 chr3L 1675210 1675225 chr3L 1675275 1675305 7 71 3.5 8.0 5.8 1.0 95 chr3L 1675210 intron CG7991 + chr3L 1675258 intron CG7991 + chr3L 1675305 intron CG7991 + chr3L_7_1675001 chr3L_1675001 RAL-83 693 chr3L 1728543 1728553 chr3L 1728600 1728626 6 66 2.0 3.0 2.5 1.7 83 chr3L 1728543 intron drpr - chr3L 1728584 intron drpr - chr3L 1728626 intron drpr - chr3L_6_1725001 chr3L_1725001 RAL-83 694 chr3L 2119509 2119540 chr3L 2119589 2119620 12 80 4.0 2.0 3.0 3.0 111 chr3L 2119509 intron zormin - chr3L 2119564 intron zormin - chr3L 2119620 intron zormin - chr3L_12_2115001 chr3L_2115001 RAL-83 695 chr3L 2139205 2139225 chr3L 2139286 2139306 4 81 2.0 2.0 2.0 1.3 101 chr3L 2139205 intron zormin - chr3L 2139256 intron zormin - chr3L 2139306 intron zormin - chr3L_4_2135001 chr3L_2135001 RAL-83 696 chr3L 2168778 2168790 chr3L 2168869 2168881 6 90 7.0 4.0 5.5 0.9 103 chr3L 2168778 exon CG15879 - chr3L 2168830 intron CG15879 - chr3L 2168881 intron CG15879 - chr3L_6_2165001 chr3L_2165001 RAL-83 697 chr3L 2168793 2168808 chr3L 2168863 2168899 5 86 3.5 3.0 3.2 1.2 106 chr3L 2168793 intron CG15879 - chr3L 2168846 intron CG15879 - chr3L 2168899 intron CG15879 - chr3L_5_2165001 chr3L_2165001 RAL-83 698 chr3L 2293390 2293425 chr3L 2293470 2293502 14 76 3.0 1.5 2.2 4.4 112 chr3L 2293390 intron MsR2 + chr3L 2293446 intron MsR2 + chr3L 2293502 intron MsR2 + chr3L_14_2290001 chr3L_2290001 RAL-83 699 chr3L 2293854 2293869 chr3L 2293932 2293944 5 77 4.0 0.0 2.0 1.7 90 chr3L 2293854 intron MsR2 + chr3L 2293899 intron MsR2 + chr3L 2293944 intron MsR2 + chr3L_5_2290001 chr3L_2290001 RAL-83 700 chr3L 2310533 2310564 chr3L 2310655 2310686 13 120 5.0 1.5 3.2 3.1 153 chr3L 2310533 intergenic not near genes chr3L 2310610 intergenic not near genes chr3L 2310686 intergenic not near genes chr3L_13_2310001 chr3L_2310001 RAL-83 701 chr3L 2411340 2411343 chr3L 2411418 2411423 5 79 3.0 3.0 3.0 1.2 83 chr3L 2411340 intron CG45186 + chr3L 2411382 intron CG45186 + chr3L 2411423 intron CG45186 + chr3L_5_2410001 chr3L_2410001 RAL-83 702 chr3L 2447502 2447531 chr3L 2456658 2456687 roo 9 9153 6.0 3.0 4.5 1.6 9185 chr3L 2447502 intron CG45186 + chr3L 2452094 intron CG45186 + chr3L 2456687 intron CG45186 + chr3L_9_2450001 chr3L_2450001 RAL-83 703 chr3L 2515412 2515416 chr3L 2515494 2515496 5 81 0.5 7.5 4.0 1.0 84 chr3L 2515412 intron Spn - chr3L 2515454 intron Spn - chr3L 2515496 intron Spn - chr3L_5_2515001 chr3L_2515001 RAL-83 704 chr3L 2517782 2517807 chr3L 2517917 2517944 8 136 2.5 8.5 5.5 1.2 162 chr3L 2517782 intron,5` UTR Spn -,CR45170 + chr3L 2517863 intron,5` UTR Spn -,CR45170 + chr3L 2517944 intron,5` UTR Spn -,CR45170 + chr3L_8_2515001 chr3L_2515001 RAL-83 705 chr3L 2533648 2533674 chr3L 2533730 2533751 4 80 7.0 4.0 5.5 0.6 103 chr3L 2533648 intron Spn - chr3L 2533700 intron Spn - chr3L 2533751 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-83 706 chr3L 2581904 2581914 chr3L 2581998 2582008 4 94 2.0 5.0 3.5 0.9 104 chr3L 2581904 intron msn - chr3L 2581956 intron msn - chr3L 2582008 intron msn - chr3L_4_2580001 chr3L_2580001 RAL-83 707 chr3L 2630369 2630389 chr3L 2630987 2630987 6 615 4.5 5.0 4.8 1.0 618 chr3L 2630369 3` UTR CR45660 - chr3L 2630678 3` UTR CR45660 - chr3L 2630987 intergenic CR45660 - chr3L_6_2630001 chr3L_2630001 RAL-83 708 chr3L 2674775 2674798 chr3L 2674854 2674875 4 79 4.5 2.0 3.2 1.0 100 chr3L 2674775 intron Fife - chr3L 2674825 intron Fife - chr3L 2674875 intron Fife - chr3L_4_2670001 chr3L_2670001 RAL-83 709 chr3L 2745091 2745126 chr3L 2745168 2745192 10 71 4.0 5.5 4.8 1.7 101 chr3L 2745091 intron Mrtf - chr3L 2745142 intron Mrtf - chr3L 2745192 intron Mrtf - chr3L_10_2745001 chr3L_2745001 RAL-83 710 chr3L 2795739 2795748 chr3L 2795861 2795871 5 122 2.0 3.5 2.8 1.3 132 chr3L 2795739 intron CG43444 - chr3L 2795805 intron CG43444 - chr3L 2795871 intron CG43444 - chr3L_5_2795001 chr3L_2795001 RAL-83 711 chr3L 2854484 2854497 chr3L 2854562 2854566 7 74 6.0 5.0 5.5 1.1 82 chr3L 2854484 intron CG43444 - chr3L 2854525 intron CG43444 - chr3L 2854566 intron CG43444 - chr3L_7_2850001 chr3L_2850001 RAL-83 712 chr3L 2927838 2927855 chr3L 2936114 2936132 Tirant 7 8276 5.0 0.0 2.5 2.0 8294 chr3L 2927838 intron Shab + chr3L 2931985 intron Shab + chr3L 2936132 intron Shab + chr3L_7_2930001 chr3L_2930001 RAL-83 713 chr3L 2974310 2974341 chr3L 2974391 2974422 11 75 0.0 6.0 3.0 2.8 112 chr3L 2974310 intergenic not near genes chr3L 2974366 intergenic not near genes chr3L 2974422 intergenic not near genes chr3L_11_2970001 chr3L_2970001 RAL-83 714 chr3L 3061283 3061314 chr3L 3069866 3069896 Tirant 9 8577 3.0 2.0 2.5 2.6 8613 chr3L 3061283 intron CG32486 - chr3L 3065590 intron CG32486 - chr3L 3069896 intron CG32486 - chr3L_9_3065001 chr3L_3065001 RAL-83 715 chr3L 3076662 3076680 chr3L 3077832 3077846 10 1167 40.5 36.0 38.2 0.3 1184 chr3L 3076662 intron CG11486 + chr3L 3077254 intron CG11486 + chr3L 3077846 intron CG11486 + chr3L_10_3075001 chr3L_3075001 RAL-83 716 chr3L 3076661 3076687 chr3L 3077847 3077855 6 1172 44.0 34.5 39.2 0.1 1194 chr3L 3076661 intron CG11486 + chr3L 3077258 intron CG11486 + chr3L 3077855 intron CG11486 + chr3L_6_3075001 chr3L_3075001 RAL-83 717 chr3L 3257094 3257119 chr3L 3257264 3257296 9 176 1.5 3.0 2.2 2.8 202 chr3L 3257094 intergenic not near genes chr3L 3257195 intergenic not near genes chr3L 3257296 intergenic not near genes chr3L_9_3255001 chr3L_3255001 RAL-83 718 chr3L 3272319 3272339 chr3L 3272400 3272420 4 81 1.5 1.0 1.2 1.8 101 chr3L 3272319 intron CG14960 + chr3L 3272370 intron CG14960 + chr3L 3272420 intron CG14960 + chr3L_4_3270001 chr3L_3270001 RAL-83 719 chr3L 3281438 3281474 chr3L 3281934 3281969 Doc 11 495 4.0 4.0 4.0 2.2 531 chr3L 3281438 intron CG12017 + chr3L 3281704 intron CG12017 + chr3L 3281969 intron CG12017 + chr3L_11_3280001 chr3L_3280001 RAL-83 720 chr3L 3388595 3388617 chr3L 3388681 3388710 4 91 4.5 5.0 4.8 0.7 115 chr3L 3388595 intergenic not near genes chr3L 3388652 intergenic not near genes chr3L 3388710 intergenic not near genes chr3L_4_3385001 chr3L_3385001 RAL-83 721 chr3L 3470178 3470187 chr3L 3470252 3470263 5 76 0.0 4.5 2.2 1.6 85 chr3L 3470178 intron CG14971 - chr3L 3470220 intron CG14971 - chr3L 3470263 intron CG14971 - chr3L_5_3470001 chr3L_3470001 RAL-83 722 chr3L 3475077 3475113 chr3L 3475520 3475555 jockey 15 443 1.5 9.0 5.2 2.4 478 chr3L 3475077 intron CG42324 + chr3L 3475316 intron CG42324 + chr3L 3475555 intron CG42324 + chr3L_15_3475001 chr3L_3475001 RAL-83 723 chr3L 3565940 3565970 chr3L 3566016 3566045 12 73 4.0 6.0 5.0 2.0 105 chr3L 3565940 intron Eip63E + chr3L 3565992 intron Eip63E + chr3L 3566045 intron Eip63E + chr3L_12_3565001 chr3L_3565001 RAL-83 724 chr3L 3601296 3601327 chr3L 3606607 3606620 copia 10 5308 7.5 1.0 4.2 1.9 5324 chr3L 3601296 intron Eip63E + chr3L 3603958 intron Eip63E + chr3L 3606620 intron Eip63E + chr3L_10_3600001 chr3L_3600001 RAL-83 725 chr3L 3627235 3627248 chr3L 3627340 3627352 4 105 2.5 0.5 1.5 1.6 117 chr3L 3627235 intron dar1 + chr3L 3627294 intron dar1 + chr3L 3627352 intron dar1 + chr3L_4_3625001 chr3L_3625001 RAL-83 726 chr3L 3743769 3743783 chr3L 3743942 3743956 4 172 0.0 6.0 3.0 1.0 187 chr3L 3743769 intron CG32264 - chr3L 3743862 intron CG32264 - chr3L 3743956 intron CG32264 - chr3L_4_3740001 chr3L_3740001 RAL-83 727 chr3L 3815056 3815083 chr3L 3815137 3815143 8 78 2.0 2.5 2.2 2.5 87 chr3L 3815056 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815100 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815143 intron,intron Scsalpha +,CR43932 - chr3L_8_3815001 chr3L_3815001 RAL-83 728 chr3L 3833739 3833767 chr3L 3833979 3834008 pogo 5 241 3.0 1.0 2.0 1.7 269 chr3L 3833739 intron enc + chr3L 3833874 intron enc + chr3L 3834008 intron enc + chr3L_5_3830001 chr3L_3830001 RAL-83 729 chr3L 3890961 3890993 chr3L 3891042 3891074 9 79 2.0 0.0 1.0 4.5 113 chr3L 3890961 intergenic not near genes chr3L 3891018 intergenic not near genes chr3L 3891074 intergenic not near genes chr3L_9_3890001 chr3L_3890001 RAL-83 730 chr3L 3946192 3946216 chr3L 3946269 3946293 4 76 1.5 3.5 2.5 1.1 101 chr3L 3946192 3` UTR CG14982 + chr3L 3946242 3` UTR CG14982 + chr3L 3946293 3` UTR CG14982 + chr3L_4_3945001 chr3L_3945001 RAL-83 731 chr3L 4058842 4058871 chr3L 4058921 4058951 8 78 2.0 2.5 2.2 2.5 109 chr3L 4058842 3` UTR CG1136 + chr3L 4058896 3` UTR CG1136 + chr3L 4058951 3` UTR CG1136 + chr3L_8_4055001 chr3L_4055001 RAL-83 732 chr3L 4132659 4132692 chr3L 4132761 4132763 6 96 4.0 1.0 2.5 1.7 104 chr3L 4132659 intron ens - chr3L 4132711 intron ens - chr3L 4132763 intron ens - chr3L_6_4130001 chr3L_4130001 RAL-83 733 chr3L 4501751 4501775 chr3L 4501827 4501849 6 75 3.0 6.0 4.5 1.1 98 chr3L 4501751 3` UTR NT1 - chr3L 4501800 3` UTR NT1 - chr3L 4501849 3` UTR NT1 - chr3L_6_4500001 chr3L_4500001 RAL-83 734 chr3L 4837891 4837923 chr3L 4837969 4838001 5 78 0.5 4.0 2.2 1.6 110 chr3L 4837891 3` UTR CG13707 - chr3L 4837946 3` UTR CG13707 - chr3L 4838001 3` UTR CG13707 - chr3L_5_4835001 chr3L_4835001 RAL-83 735 chr3L 4840405 4840418 chr3L 4840512 4840527 5 108 0.0 0.0 0.0 5.0 122 chr3L 4840405 intergenic CG13707 - chr3L 4840466 intergenic CG13707 - chr3L 4840527 intergenic CG13707 - chr3L_5_4840001 chr3L_4840001 RAL-83 736 chr3L 4846584 4846602 chr3L 4846680 4846698 6 95 3.0 5.0 4.0 1.2 114 chr3L 4846584 intergenic not near genes chr3L 4846641 intergenic not near genes chr3L 4846698 intergenic not near genes chr3L_6_4845001 chr3L_4845001 RAL-83 737 chr3L 4901126 4901153 chr3L 4907316 4907342 diver 7 6189 4.5 0.0 2.2 2.2 6216 chr3L 4901126 intergenic CG13704 + chr3L 4904234 intergenic not near genes chr3L 4907342 intergenic not near genes chr3L_7_4900001 chr3L_4900001 RAL-83 738 chr3L 4959668 4959672 chr3L 4960090 4960113 5 432 0.0 6.0 3.0 1.2 445 chr3L 4959668 intron Con - chr3L 4959890 intron Con - chr3L 4960113 intron Con - chr3L_5_4955001 chr3L_4955001 RAL-83 739 chr3L 4969411 4969438 chr3L 4969558 4969586 13 144 1.5 3.0 2.2 4.1 175 chr3L 4969411 intron Con - chr3L 4969498 intron Con - chr3L 4969586 intron Con - chr3L_13_4965001 chr3L_4965001 RAL-83 740 chr3L 5045454 5045482 chr3L 5050235 5050263 Doc 4 4781 2.5 2.0 2.2 1.2 4809 chr3L 5045454 intron Con - chr3L 5047858 intron Con - chr3L 5050263 intron Con - chr3L_4_5045001 chr3L_5045001 RAL-83 741 chr3L 5130554 5130572 chr3L 5132803 5132811 5 2243 23.0 4.5 13.8 0.3 2257 chr3L 5130554 intergenic CG4597 + chr3L 5131682 intron CG15212 + chr3L 5132811 3` UTR CG15213 - chr3L_5_5130001 chr3L_5130001 RAL-83 742 chr3L 5212238 5212270 chr3L 5212321 5212353 7 82 5.0 3.0 4.0 1.4 115 chr3L 5212238 intron shep - chr3L 5212296 intron shep - chr3L 5212353 intron shep - chr3L_7_5210001 chr3L_5210001 RAL-83 743 chr3L 5251859 5251870 chr3L 5251938 5251949 4 78 0.0 2.0 1.0 2.0 90 chr3L 5251859 intron shep - chr3L 5251904 intron shep - chr3L 5251949 intron shep - chr3L_4_5250001 chr3L_5250001 RAL-83 744 chr3L 5388203 5388231 chr3L 5388526 5388555 12 321 8.0 3.5 5.8 1.8 352 chr3L 5388203 intergenic not near genes chr3L 5388379 intergenic not near genes chr3L 5388555 intergenic not near genes chr3L_12_5385001 chr3L_5385001 RAL-83 745 chr3L 5516408 5516417 chr3L 5516503 5516508 4 94 6.0 0.0 3.0 1.0 100 chr3L 5516408 intron Lkr - chr3L 5516458 intron Lkr - chr3L 5516508 intron Lkr - chr3L_4_5515001 chr3L_5515001 RAL-83 746 chr3L 5549448 5549468 chr3L 5549521 5549545 6 74 5.0 5.5 5.2 1.0 97 chr3L 5549448 intron CG10625 - chr3L 5549496 intron CG10625 - chr3L 5549545 intron CG10625 - chr3L_6_5545001 chr3L_5545001 RAL-83 747 chr3L 5683265 5683291 chr3L 5683351 5683378 9 87 2.5 3.5 3.0 2.2 113 chr3L 5683265 intron sif + chr3L 5683322 intron sif + chr3L 5683378 intron sif + chr3L_9_5680001 chr3L_5680001 RAL-83 748 chr3L 5892407 5892439 chr3L 5892485 5892517 4 78 1.0 3.5 2.2 1.2 110 chr3L 5892407 intergenic not near genes chr3L 5892462 intergenic not near genes chr3L 5892517 intergenic not near genes chr3L_4_5890001 chr3L_5890001 RAL-83 749 chr3L 5926314 5926352 chr3L 5926504 5926542 BS 17 185 3.0 6.0 4.5 3.1 228 chr3L 5926314 intron Vap-33B + chr3L 5926428 intron Vap-33B + chr3L 5926542 intron Vap-33B + chr3L_17_5925001 chr3L_5925001 RAL-83 750 chr3L 5980593 5980617 chr3L 5980678 5980704 13 86 3.5 5.5 4.5 2.4 111 chr3L 5980593 intergenic not near genes chr3L 5980648 intergenic not near genes chr3L 5980704 intergenic not near genes chr3L_13_5980001 chr3L_5980001 RAL-83 751 chr3L 5992591 5992620 chr3L 5992693 5992722 4 102 2.5 1.5 2.0 1.3 131 chr3L 5992591 intergenic not near genes chr3L 5992656 intergenic not near genes chr3L 5992722 intergenic not near genes chr3L_4_5990001 chr3L_5990001 RAL-83 752 chr3L 6001678 6001715 chr3L 6004378 6004413 jockey 11 2698 2.0 2.0 2.0 3.7 2735 chr3L 6001678 intron PVRAP + chr3L 6003046 intron PVRAP + chr3L 6004413 intron PVRAP + chr3L_11_6000001 chr3L_6000001 RAL-83 753 chr3L 6052661 6052665 chr3L 6052732 6052749 5 82 8.0 5.0 6.5 0.7 88 chr3L 6052661 exon Jon65Aii + chr3L 6052705 intron Jon65Aii + chr3L 6052749 exon Jon65Aii + chr3L_5_6050001 chr3L_6050001 RAL-83 754 chr3L 6220913 6220944 chr3L 6230065 6230096 roo 9 9152 4.5 5.0 4.8 1.6 9183 chr3L 6220913 5` UTR pncr008:3L + chr3L 6225504 intergenic not near genes chr3L 6230096 intergenic not near genes chr3L_9_6225001 chr3L_6225001 RAL-83 755 chr3L 6335564 6335588 chr3L 6335669 6335698 9 109 3.0 2.5 2.8 2.4 134 chr3L 6335564 intron CG13300 - chr3L 6335631 intron CG13300 - chr3L 6335698 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-83 756 chr3L 6501461 6501480 chr3L 6501532 6501564 7 74 5.5 3.0 4.2 1.3 103 chr3L 6501461 intron sfl + chr3L 6501512 intron sfl + chr3L 6501564 intron sfl + chr3L_7_6500001 chr3L_6500001 RAL-83 757 chr3L 6504315 6504347 chr3L 6504411 6504447 16 100 7.5 3.5 5.5 2.5 132 chr3L 6504315 intron sfl + chr3L 6504381 intron sfl + chr3L 6504447 intron sfl + chr3L_16_6500001 chr3L_6500001 RAL-83 758 chr3L 6908013 6908023 chr3L 6908098 6908108 5 85 5.5 0.0 2.8 1.3 95 chr3L 6908013 intergenic not near genes chr3L 6908060 intergenic not near genes chr3L 6908108 intergenic not near genes chr3L_5_6905001 chr3L_6905001 RAL-83 759 chr3L 6934342 6934356 chr3L 6934453 6934467 4 111 2.5 3.0 2.8 1.1 125 chr3L 6934342 exon CG14820 + chr3L 6934404 intron CG14820 + chr3L 6934467 intron CG14820 + chr3L_4_6930001 chr3L_6930001 RAL-83 760 chr3L 6990719 6990745 chr3L 6990799 6990825 7 80 4.5 2.5 3.5 1.6 106 chr3L 6990719 5` UTR bin + chr3L 6990772 5` UTR bin + chr3L 6990825 5` UTR bin + chr3L_7_6990001 chr3L_6990001 RAL-83 761 chr3L 7024384 7024416 chr3L 7024461 7024493 8 77 1.0 1.5 1.2 3.6 109 chr3L 7024384 intron Mp + chr3L 7024438 intron Mp + chr3L 7024493 intron Mp + chr3L_8_7020001 chr3L_7020001 RAL-83 762 chr3L 7033172 7033204 chr3L 7033251 7033284 19 78 1.0 3.0 2.0 6.3 112 chr3L 7033172 intron Mp + chr3L 7033228 intron Mp + chr3L 7033284 intron Mp + chr3L_19_7030001 chr3L_7030001 RAL-83 763 chr3L 7185728 7185755 chr3L 7185908 7185930 8 177 4.5 2.5 3.5 1.8 202 chr3L 7185728 intron Dscam2 - chr3L 7185829 intron Dscam2 - chr3L 7185930 intron Dscam2 - chr3L_8_7185001 chr3L_7185001 RAL-83 764 chr3L 7244937 7244965 chr3L 7245029 7245055 6 87 2.5 3.0 2.8 1.6 118 chr3L 7244937 exon mei-P22 + chr3L 7244996 exon mei-P22 + chr3L 7245055 exon mei-P22 + chr3L_6_7240001 chr3L_7240001 RAL-83 765 chr3L 7276154 7276183 chr3L 7276236 7276245 4 77 2.5 1.5 2.0 1.3 91 chr3L 7276154 intron unc-13-4A - chr3L 7276200 intron unc-13-4A - chr3L 7276245 intron unc-13-4A - chr3L_4_7275001 chr3L_7275001 RAL-83 766 chr3L 7277106 7277131 chr3L 7277208 7277233 8 102 5.5 1.5 3.5 1.8 127 chr3L 7277106 exon unc-13-4A - chr3L 7277170 intron unc-13-4A - chr3L 7277233 intron unc-13-4A - chr3L_8_7275001 chr3L_7275001 RAL-83 767 chr3L 7296053 7296088 chr3L 7296577 7296612 11 524 3.0 2.5 2.8 2.9 559 chr3L 7296053 intron unc-13-4A - chr3L 7296332 intron unc-13-4A - chr3L 7296612 intron unc-13-4A - chr3L_11_7295001 chr3L_7295001 RAL-83 768 chr3L 7358295 7358325 chr3L 7359579 7359606 13 1280 18.0 25.0 21.5 0.6 1311 chr3L 7358295 exon pst - chr3L 7358950 exon pst - chr3L 7359606 intron pst - chr3L_13_7355001 chr3L_7355001 RAL-83 769 chr3L 7377320 7377348 chr3L 7380424 7380452 297 5 3104 2.0 2.0 2.0 1.7 3132 chr3L 7377320 intron SMSr - chr3L 7378886 intron SMSr - chr3L 7380452 intron SMSr - chr3L_5_7375001 chr3L_7375001 RAL-83 770 chr3L 7426020 7426042 chr3L 7426402 7426424 6 382 2.0 5.5 3.8 1.2 404 chr3L 7426020 intron CG42458 + chr3L 7426222 intron CG42458 + chr3L 7426424 intron CG42458 + chr3L_6_7425001 chr3L_7425001 RAL-83 771 chr3L 7449061 7449094 chr3L 7449146 7449175 13 80 3.0 6.0 4.5 2.4 114 chr3L 7449061 intron CG42458 + chr3L 7449118 intron CG42458 + chr3L 7449175 intron CG42458 + chr3L_13_7445001 chr3L_7445001 RAL-83 772 chr3L 7480054 7480073 chr3L 7480143 7480162 5 89 1.0 1.0 1.0 2.5 108 chr3L 7480054 intergenic not near genes chr3L 7480108 intergenic not near genes chr3L 7480162 intergenic not near genes chr3L_5_7480001 chr3L_7480001 RAL-83 773 chr3L 7491665 7491684 chr3L 7491776 7491791 7 106 2.5 2.0 2.2 2.2 126 chr3L 7491665 intergenic Cyp316a1 + chr3L 7491728 intergenic Cyp316a1 + chr3L 7491791 intergenic Cyp316a1 + chr3L_7_7490001 chr3L_7490001 RAL-83 774 chr3L 7538852 7538875 chr3L 7538948 7538972 6 93 3.5 2.5 3.0 1.5 120 chr3L 7538852 3` UTR lqf + chr3L 7538912 3` UTR lqf + chr3L 7538972 3` UTR lqf + chr3L_6_7535001 chr3L_7535001 RAL-83 775 chr3L 7560354 7560378 chr3L 7560593 7560617 13 237 1.5 6.0 3.8 2.7 263 chr3L 7560354 intergenic CG14837 - chr3L 7560486 intergenic CG14837 - chr3L 7560617 intergenic not near genes chr3L_13_7560001 chr3L_7560001 RAL-83 776 chr3L 7576227 7576235 chr3L 7576314 7576323 6 88 3.5 3.0 3.2 1.4 96 chr3L 7576227 intergenic not near genes chr3L 7576275 intergenic not near genes chr3L 7576323 intergenic not near genes chr3L_6_7575001 chr3L_7575001 RAL-83 777 chr3L 7577766 7577789 chr3L 7577912 7577943 7 146 2.5 2.5 2.5 2.0 177 chr3L 7577766 intergenic not near genes chr3L 7577854 intergenic not near genes chr3L 7577943 intergenic not near genes chr3L_7_7575001 chr3L_7575001 RAL-83 778 chr3L 7793714 7793745 chr3L 7800765 7800797 297 12 7051 2.0 3.5 2.8 3.2 7083 chr3L 7793714 intron CG32369 - chr3L 7797256 intron CG32369 - chr3L 7800797 intron CG32369 - chr3L_12_7795001 chr3L_7795001 RAL-83 779 chr3L 7801743 7801771 chr3L 7801979 7802009 14 238 2.0 3.5 2.8 3.7 266 chr3L 7801743 intron CG32369 - chr3L 7801876 intron CG32369 - chr3L 7802009 intron CG32369 - chr3L_14_7800001 chr3L_7800001 RAL-83 780 chr3L 7835416 7835449 chr3L 7835494 7835526 13 77 3.0 3.5 3.2 3.1 110 chr3L 7835416 intron Pdp1 - chr3L 7835471 intron Pdp1 - chr3L 7835526 intron Pdp1 - chr3L_13_7835001 chr3L_7835001 RAL-83 781 chr3L 7886512 7886543 chr3L 7889030 7889061 Stalker4 7 2518 2.0 2.5 2.2 2.2 2549 chr3L 7886512 intron CG32365 + chr3L 7887786 intron CG32365 + chr3L 7889061 intron CG32365 + chr3L_7_7885001 chr3L_7885001 RAL-83 782 chr3L 7985366 7985400 chr3L 7987694 7987695 NOF 8 2322 1.0 2.5 1.8 2.9 2329 chr3L 7985366 intron nmo + chr3L 7986530 intron nmo + chr3L 7987695 intron nmo + chr3L_8_7985001 chr3L_7985001 RAL-83 783 chr3L 7995958 7995973 chr3L 7996066 7996081 5 108 2.0 0.0 1.0 2.5 123 chr3L 7995958 intron nmo + chr3L 7996020 intron nmo + chr3L 7996081 intron nmo + chr3L_5_7995001 chr3L_7995001 RAL-83 784 chr3L 8081280 8081292 chr3L 8081383 8081394 5 103 0.0 0.5 0.2 4.2 114 chr3L 8081280 intron Ect4 + chr3L 8081337 intron Ect4 + chr3L 8081394 intron Ect4 + chr3L_5_8080001 chr3L_8080001 RAL-83 785 chr3L 8085551 8085566 chr3L 8090368 8090382 4 4816 8.5 26.0 17.2 0.2 4831 chr3L 8085551 intron Ect4 + chr3L 8087966 intron,3` UTR Ect4 +,CG7565 - chr3L 8090382 intron,exon Ect4 +,CG7565 - chr3L_4_8085001 chr3L_8085001 RAL-83 786 chr3L 8208126 8208154 chr3L 8208257 8208279 11 129 2.0 3.0 2.5 3.1 153 chr3L 8208126 intergenic not near genes chr3L 8208202 intergenic not near genes chr3L 8208279 intergenic not near genes chr3L_11_8205001 chr3L_8205001 RAL-83 787 chr3L 8210806 8210832 chr3L 8210921 8210947 4 113 0.5 2.0 1.2 1.8 141 chr3L 8210806 intergenic CG32364 - chr3L 8210876 intergenic CG32364 - chr3L 8210947 intergenic CG32364 - chr3L_4_8210001 chr3L_8210001 RAL-83 788 chr3L 8295789 8295822 chr3L 8295947 8295980 9 158 5.5 4.5 5.0 1.5 191 chr3L 8295789 intergenic CG7201 - chr3L 8295884 intergenic not near genes chr3L 8295980 intergenic not near genes chr3L_9_8295001 chr3L_8295001 RAL-83 789 chr3L 8371732 8371756 chr3L 8371817 8371842 6 85 0.0 2.5 1.2 2.7 110 chr3L 8371732 intergenic not near genes chr3L 8371787 intergenic not near genes chr3L 8371842 intergenic not near genes chr3L_6_8370001 chr3L_8370001 RAL-83 790 chr3L 8498307 8498322 chr3L 8505774 8505789 blood 5 7467 1.0 2.0 1.5 2.0 7482 chr3L 8498307 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505789 intron CG43163 - chr3L_5_8500001 chr3L_8500001 RAL-83 791 chr3L 8519477 8519502 chr3L 8519861 8519886 9 384 1.0 2.5 1.8 3.2 409 chr3L 8519477 intron GstO3 + chr3L 8519682 exon GstO3 + chr3L 8519886 exon GstO3 + chr3L_9_8515001 chr3L_8515001 RAL-83 792 chr3L 8604203 8604227 chr3L 8604282 8604306 5 79 2.5 1.0 1.8 1.8 103 chr3L 8604203 intergenic CG5989 -,CG6282 + chr3L 8604254 intergenic CG5989 -,CG6282 + chr3L 8604306 intergenic CG5989 -,CG6282 + chr3L_5_8600001 chr3L_8600001 RAL-83 793 chr3L 8791275 8791297 chr3L 8796695 8796697 I-element 6 5416 2.5 0.0 1.2 2.7 5422 chr3L 8791275 exon Fhos + chr3L 8793986 intron Fhos + chr3L 8796697 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-83 794 chr3L 8832410 8832435 chr3L 8832504 8832529 16 92 3.5 6.0 4.8 2.8 119 chr3L 8832410 intron dally + chr3L 8832470 intron dally + chr3L 8832529 intron dally + chr3L_16_8830001 chr3L_8830001 RAL-83 795 chr3L 8849209 8849243 chr3L 8849289 8849323 6 77 4.0 7.0 5.5 0.9 114 chr3L 8849209 intron dally + chr3L 8849266 intron dally + chr3L 8849323 intron dally + chr3L_6_8845001 chr3L_8845001 RAL-83 796 chr3L 8950548 8950578 chr3L 8950642 8950645 6 89 3.0 2.0 2.5 1.7 97 chr3L 8950548 intron,intron CG43783 -,orb2 - chr3L 8950596 intron,intron CG43783 -,orb2 - chr3L 8950645 intron,intron CG43783 -,orb2 - chr3L_6_8950001 chr3L_8950001 RAL-83 797 chr3L 9024503 9024536 chr3L 9024583 9024616 7 79 0.0 1.0 0.5 4.7 113 chr3L 9024503 intergenic not near genes chr3L 9024560 intergenic not near genes chr3L 9024616 intergenic not near genes chr3L_7_9020001 chr3L_9020001 RAL-83 798 chr3L 9051873 9051907 chr3L 9051959 9051997 11 86 4.0 2.0 3.0 2.8 124 chr3L 9051873 intron Argk - chr3L 9051935 intron Argk - chr3L 9051997 intron Argk - chr3L_11_9050001 chr3L_9050001 RAL-83 799 chr3L 9056601 9056623 chr3L 9056673 9056677 5 70 7.0 1.5 4.2 1.0 76 chr3L 9056601 intron Argk - chr3L 9056639 intron Argk - chr3L 9056677 intron Argk - chr3L_5_9055001 chr3L_9055001 RAL-83 800 chr3L 9076928 9076933 chr3L 9084487 9084493 412 4 7560 7.0 2.5 4.8 0.7 7565 chr3L 9076928 exon Tequila + chr3L 9080710 intron Tequila + chr3L 9084493 exon Tequila + chr3L_4_9080001 chr3L_9080001 RAL-83 801 chr3L 9076939 9076959 chr3L 9084485 9084519 412 10 7558 3.5 2.5 3.0 2.5 7580 chr3L 9076939 exon Tequila + chr3L 9080729 intron Tequila + chr3L 9084519 exon Tequila + chr3L_10_9080001 chr3L_9080001 RAL-83 802 chr3L 9130562 9130580 chr3L 9134317 9134341 412 6 3760 6.0 5.5 5.8 0.9 3779 chr3L 9130562 intergenic bol - chr3L 9132452 intergenic not near genes chr3L 9134341 intergenic Dhpr + chr3L_6_9130001 chr3L_9130001 RAL-83 803 chr3L 9191877 9191905 chr3L 9191965 9191995 8 84 6.0 3.5 4.8 1.4 118 chr3L 9191877 intergenic not near genes chr3L 9191936 intergenic not near genes chr3L 9191995 intergenic not near genes chr3L_8_9190001 chr3L_9190001 RAL-83 804 chr3L 9219241 9219263 chr3L 9219913 9219925 jockey 11 671 8.0 3.0 5.5 1.7 684 chr3L 9219241 intergenic not near genes chr3L 9219583 intergenic not near genes chr3L 9219925 intergenic not near genes chr3L_11_9215001 chr3L_9215001 RAL-83 805 chr3L 9219264 9219272 chr3L 9219912 9219944 jockey 7 664 4.5 3.0 3.8 1.5 680 chr3L 9219264 intergenic not near genes chr3L 9219604 intergenic not near genes chr3L 9219944 intergenic not near genes chr3L_7_9215001 chr3L_9215001 RAL-83 806 chr3L 9232865 9232872 chr3L 9232941 9232948 5 75 1.5 4.0 2.8 1.3 83 chr3L 9232865 intergenic not near genes chr3L 9232906 intergenic not near genes chr3L 9232948 intergenic not near genes chr3L_5_9230001 chr3L_9230001 RAL-83 807 chr3L 9344210 9344220 chr3L 9344278 9344298 5 76 0.5 5.0 2.8 1.3 88 chr3L 9344210 intron PGRP-LC + chr3L 9344254 intron PGRP-LC + chr3L 9344298 intron PGRP-LC + chr3L_5_9340001 chr3L_9340001 RAL-83 808 chr3L 9467037 9467044 chr3L 9467105 9467121 4 81 2.0 3.5 2.8 1.1 84 chr3L 9467037 intron CG44838 + chr3L 9467079 intron CG44838 + chr3L 9467121 intron CG44838 + chr3L_4_9465001 chr3L_9465001 RAL-83 809 chr3L 9521075 9521092 chr3L 9521274 9521294 7 201 4.0 1.0 2.5 2.0 219 chr3L 9521075 intron CG33700 - chr3L 9521184 intron CG33700 - chr3L 9521294 intron CG33700 - chr3L_7_9520001 chr3L_9520001 RAL-83 810 chr3L 9533760 9533784 chr3L 9541319 9541342 412 4 7555 4.0 5.5 4.8 0.7 7582 chr3L 9533760 intergenic not near genes chr3L 9537551 intergenic not near genes chr3L 9541342 intergenic not near genes chr3L_4_9535001 chr3L_9535001 RAL-83 811 chr3L 9575906 9575943 chr3L 9580986 9581017 jockey 13 5077 3.5 3.5 3.5 2.9 5111 chr3L 9575906 intron CG42673 + chr3L 9578462 intron CG42673 + chr3L 9581017 intron CG42673 + chr3L_13_9575001 chr3L_9575001 RAL-83 812 chr3L 9666269 9666292 chr3L 9666352 9666374 4 83 0.5 0.0 0.2 3.3 105 chr3L 9666269 intron fry - chr3L 9666322 intron fry - chr3L 9666374 intron fry - chr3L_4_9665001 chr3L_9665001 RAL-83 813 chr3L 9745484 9745508 chr3L 9745570 9745594 8 86 4.5 2.0 3.2 1.9 110 chr3L 9745484 intron CG42268 - chr3L 9745539 intron CG42268 - chr3L 9745594 intron CG42268 - chr3L_8_9745001 chr3L_9745001 RAL-83 814 chr3L 9898677 9898690 chr3L 9898766 9898779 6 89 0.0 6.0 3.0 1.5 102 chr3L 9898677 intergenic nudE +,CG6707 - chr3L 9898728 5` UTR nudE + chr3L 9898779 5` UTR nudE + chr3L_6_9895001 chr3L_9895001 RAL-83 815 chr3L 9929672 9929697 chr3L 9938450 9938462 roo 5 8775 1.5 6.0 3.8 1.0 8790 chr3L 9929672 intron CG34356 + chr3L 9934067 intron CG34356 + chr3L 9938462 intron CG34356 + chr3L_5_9930001 chr3L_9930001 RAL-83 816 chr3L 9980258 9980292 chr3L 9980348 9980381 11 84 3.5 1.5 2.5 3.1 123 chr3L 9980258 intron dpr6 + chr3L 9980320 intron dpr6 + chr3L 9980381 intron dpr6 + chr3L_11_9980001 chr3L_9980001 RAL-83 817 chr3L 9989112 9989140 chr3L 9989407 9989434 4 295 0.5 2.0 1.2 1.8 322 chr3L 9989112 intron dpr6 + chr3L 9989273 intron dpr6 + chr3L 9989434 intron dpr6 + chr3L_4_9985001 chr3L_9985001 RAL-83 818 chr3L 10003168 10003179 chr3L 10003249 10003276 4 93 1.5 5.0 3.2 1.0 108 chr3L 10003168 intron dpr6 + chr3L 10003222 intron dpr6 + chr3L 10003276 intron dpr6 + chr3L_4_10000001 chr3L_10000001 RAL-83 819 chr3L 10007190 10007202 chr3L 10007293 10007305 4 103 2.5 1.0 1.8 1.4 115 chr3L 10007190 intron dpr6 + chr3L 10007248 intron dpr6 + chr3L 10007305 intron dpr6 + chr3L_4_10005001 chr3L_10005001 RAL-83 820 chr3L 10008924 10008952 chr3L 10009025 10009052 11 99 1.0 4.5 2.8 2.9 128 chr3L 10008924 intron dpr6 + chr3L 10008988 intron dpr6 + chr3L 10009052 intron dpr6 + chr3L_11_10005001 chr3L_10005001 RAL-83 821 chr3L 10099159 10099172 chr3L 10099272 10099285 4 112 4.0 3.5 3.8 0.8 126 chr3L 10099159 intron dpr6 + chr3L 10099222 intron dpr6 + chr3L 10099285 intron dpr6 + chr3L_4_10095001 chr3L_10095001 RAL-83 822 chr3L 10161439 10161458 chr3L 10161518 10161537 8 76 0.5 6.5 3.5 1.8 98 chr3L 10161439 intron dpr10 - chr3L 10161488 intron dpr10 - chr3L 10161537 intron dpr10 - chr3L_8_10160001 chr3L_10160001 RAL-83 823 chr3L 10250331 10250361 chr3L 10250422 10250451 10 91 0.5 3.5 2.0 3.3 120 chr3L 10250331 intergenic not near genes chr3L 10250391 intergenic not near genes chr3L 10250451 intergenic not near genes chr3L_10_10250001 chr3L_10250001 RAL-83 824 chr3L 10308741 10308772 chr3L 10308814 10308849 13 76 3.0 6.0 4.5 2.4 108 chr3L 10308741 intergenic not near genes chr3L 10308795 intergenic not near genes chr3L 10308849 intergenic not near genes chr3L_13_10305001 chr3L_10305001 RAL-83 825 chr3L 10362619 10362630 chr3L 10362715 10362750 5 115 1.5 2.0 1.8 1.8 131 chr3L 10362619 5` UTR CR44327 + chr3L 10362684 5` UTR CR44327 + chr3L 10362750 5` UTR CR44327 + chr3L_5_10360001 chr3L_10360001 RAL-83 826 chr3L 10414957 10414969 chr3L 10417309 10417334 Doc 4 2365 0.5 0.5 0.5 2.7 2377 chr3L 10414957 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417334 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-83 827 chr3L 10417570 10417599 chr3L 10417647 10417675 8 76 7.5 1.5 4.5 1.5 105 chr3L 10417570 intergenic not near genes chr3L 10417622 intergenic not near genes chr3L 10417675 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-83 828 chr3L 10509489 10509512 chr3L 10509618 10509641 8 128 4.0 5.0 4.5 1.5 152 chr3L 10509489 intron A2bp1 + chr3L 10509565 intron A2bp1 + chr3L 10509641 intron A2bp1 + chr3L_8_10505001 chr3L_10505001 RAL-83 829 chr3L 10526636 10526648 chr3L 10526717 10526727 5 80 4.0 3.0 3.5 1.1 91 chr3L 10526636 intron A2bp1 + chr3L 10526682 intron A2bp1 + chr3L 10526727 intron A2bp1 + chr3L_5_10525001 chr3L_10525001 RAL-83 830 chr3L 10538690 10538709 chr3L 10538769 10538788 4 79 2.0 0.0 1.0 2.0 98 chr3L 10538690 intron A2bp1 + chr3L 10538739 intron A2bp1 + chr3L 10538788 intron A2bp1 + chr3L_4_10535001 chr3L_10535001 RAL-83 831 chr3L 10762829 10762863 chr3L 10762913 10762947 13 82 1.5 0.0 0.8 7.2 118 chr3L 10762829 intergenic not near genes chr3L 10762888 intergenic not near genes chr3L 10762947 intergenic not near genes chr3L_13_10760001 chr3L_10760001 RAL-83 832 chr3L 10783683 10783703 chr3L 10783767 10783768 4 79 3.0 2.0 2.5 1.1 85 chr3L 10783683 intergenic not near genes chr3L 10783726 intergenic not near genes chr3L 10783768 intergenic not near genes chr3L_4_10780001 chr3L_10780001 RAL-83 833 chr3L 10864757 10864787 chr3L 10864844 10864874 5 87 23.5 24.0 23.8 0.2 117 chr3L 10864757 intron tna + chr3L 10864816 intron tna + chr3L 10864874 intron tna + chr3L_5_10860001 chr3L_10860001 RAL-83 834 chr3L 10956452 10956466 chr3L 10956570 10956584 5 118 2.5 2.5 2.5 1.4 132 chr3L 10956452 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956584 intergenic not near genes chr3L_5_10955001 chr3L_10955001 RAL-83 835 chr3L 11087064 11087087 chr3L 11088849 11088876 S-element 5 1788 2.0 4.0 3.0 1.2 1812 chr3L 11087064 intron JIL-1 - chr3L 11087970 intron JIL-1 - chr3L 11088876 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-83 836 chr3L 11135529 11135806 chr3L 11135758 11135889 10 113 1.5 2.0 1.8 3.6 360 chr3L 11135529 intergenic CG14143 + chr3L 11135709 intergenic CG14143 +,CG32082 + chr3L 11135889 intergenic CG32082 +,CG14143 + chr3L_10_11135001 chr3L_11135001 RAL-83 837 chr3L 11145540 11145555 chr3L 11145629 11145645 7 90 0.0 3.0 1.5 2.8 105 chr3L 11145540 intron CG32082 + chr3L 11145592 intron CG32082 + chr3L 11145645 intron CG32082 + chr3L_7_11145001 chr3L_11145001 RAL-83 838 chr3L 11264469 11264493 chr3L 11271421 11271445 17.6 4 6949 1.5 3.0 2.2 1.2 6976 chr3L 11264469 intergenic not near genes chr3L 11267957 intergenic not near genes chr3L 11271445 intergenic not near genes chr3L_4_11265001 chr3L_11265001 RAL-83 839 chr3L 11329689 11329717 chr3L 11332894 11332896 jockey 7 3199 10.5 5.5 8.0 0.8 3207 chr3L 11329689 intergenic not near genes chr3L 11331292 intergenic not near genes chr3L 11332896 intergenic not near genes chr3L_7_11330001 chr3L_11330001 RAL-83 840 chr3L 11329718 11329728 chr3L 11332892 11332928 jockey 6 3198 7.0 5.0 6.0 0.9 3210 chr3L 11329718 intergenic not near genes chr3L 11331323 intergenic not near genes chr3L 11332928 intergenic not near genes chr3L_6_11330001 chr3L_11330001 RAL-83 841 chr3L 11383964 11383997 chr3L 11384043 11384076 7 74 2.5 5.0 3.8 1.5 112 chr3L 11383964 intron CR42755 - chr3L 11384020 3` UTR CR42755 - chr3L 11384076 3` UTR CR42755 - chr3L_7_11380001 chr3L_11380001 RAL-83 842 chr3L 11539467 11539498 chr3L 11539544 11539575 5 74 3.5 2.5 3.0 1.2 108 chr3L 11539467 intron Mob2 - chr3L 11539521 intron Mob2 - chr3L 11539575 intron Mob2 - chr3L_5_11535001 chr3L_11535001 RAL-83 843 chr3L 11564789 11564812 chr3L 11572404 11572436 412 4 7620 2.0 2.5 2.2 1.2 7647 chr3L 11564789 exon CG33267 + chr3L 11568612 intron CG33267 + chr3L 11572436 exon CG33267 + chr3L_4_11565001 chr3L_11565001 RAL-83 844 chr3L 11595239 11595272 chr3L 11595318 11595350 4 77 4.0 5.5 4.8 0.7 111 chr3L 11595239 intergenic not near genes chr3L 11595294 intergenic not near genes chr3L 11595350 intergenic not near genes chr3L_4_11595001 chr3L_11595001 RAL-83 845 chr3L 11678103 11678124 chr3L 11678190 11678211 10 85 1.0 4.5 2.8 2.6 108 chr3L 11678103 intron CG32085 - chr3L 11678157 intron CG32085 - chr3L 11678211 intron CG32085 - chr3L_10_11675001 chr3L_11675001 RAL-83 846 chr3L 11723087 11723109 chr3L 11727882 11727903 Doc 5 4795 2.0 3.0 2.5 1.4 4816 chr3L 11723087 3` UTR Bmcp + chr3L 11725495 intron Bmcp + chr3L 11727903 3` UTR Bmcp + chr3L_5_11725001 chr3L_11725001 RAL-83 847 chr3L 11729679 11729703 chr3L 11729755 11729779 8 75 2.5 2.5 2.5 2.3 100 chr3L 11729679 exon CG32088 + chr3L 11729729 intron CG32088 + chr3L 11729779 exon CG32088 + chr3L_8_11725001 chr3L_11725001 RAL-83 848 chr3L 11744015 11744039 chr3L 11744123 11744147 7 106 4.0 0.0 2.0 2.3 132 chr3L 11744015 exon CG6024 - chr3L 11744081 intron CG6024 - chr3L 11744147 intron CG6024 - chr3L_7_11740001 chr3L_11740001 RAL-83 849 chr3L 11849337 11849357 chr3L 11849437 11849451 4 98 1.5 3.0 2.2 1.2 114 chr3L 11849337 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849451 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-83 850 chr3L 11850140 11850168 chr3L 11850234 11850260 6 93 1.5 0.5 1.0 3.0 120 chr3L 11850140 intergenic not near genes chr3L 11850200 intergenic CG44837 - chr3L 11850260 intergenic CG44837 - chr3L_6_11850001 chr3L_11850001 RAL-83 851 chr3L 11864557 11864570 chr3L 11865852 11865858 pogo 4 1291 5.5 1.5 3.5 0.9 1301 chr3L 11864557 intron CG44837 - chr3L 11865208 intron CG44837 - chr3L 11865858 intron CG44837 - chr3L_4_11865001 chr3L_11865001 RAL-83 852 chr3L 11872251 11872266 chr3L 11872339 11872363 8 91 6.0 4.0 5.0 1.3 112 chr3L 11872251 intron CG44837 - chr3L 11872307 intron CG44837 - chr3L 11872363 intron CG44837 - chr3L_8_11870001 chr3L_11870001 RAL-83 853 chr3L 11887261 11887289 chr3L 11887357 11887395 5 98 0.0 0.0 0.0 5.0 134 chr3L 11887261 intron,3` UTR CG44837 -,CG5897 - chr3L 11887328 intron,3` UTR CG44837 -,CG5897 - chr3L 11887395 intron,3` UTR CG44837 -,CG5897 - chr3L_5_11885001 chr3L_11885001 RAL-83 854 chr3L 11902476 11902508 chr3L 11902550 11902569 8 69 1.0 3.0 2.0 2.7 93 chr3L 11902476 intron CG44837 - chr3L 11902522 intron CG44837 - chr3L 11902569 intron CG44837 - chr3L_8_11900001 chr3L_11900001 RAL-83 855 chr3L 11905132 11905162 chr3L 11905209 11905239 9 76 2.0 2.0 2.0 3.0 107 chr3L 11905132 intron CG44837 - chr3L 11905186 intron CG44837 - chr3L 11905239 intron CG44837 - chr3L_9_11905001 chr3L_11905001 RAL-83 856 chr3L 12013914 12013937 chr3L 12014005 12014026 11 89 4.0 2.0 3.0 2.8 112 chr3L 12013914 intron rols - chr3L 12013970 intron rols - chr3L 12014026 intron rols - chr3L_11_12010001 chr3L_12010001 RAL-83 857 chr3L 12089086 12089092 chr3L 12089165 12089172 4 80 3.0 4.5 3.8 0.8 86 chr3L 12089086 3` UTR CG17154 + chr3L 12089129 3` UTR CG17154 + chr3L 12089172 3` UTR CG17154 + chr3L_4_12085001 chr3L_12085001 RAL-83 858 chr3L 12089094 12089106 chr3L 12089164 12089186 7 79 1.5 4.0 2.8 1.8 92 chr3L 12089094 3` UTR CG17154 + chr3L 12089140 3` UTR CG17154 + chr3L 12089186 3` UTR CG17154 + chr3L_7_12085001 chr3L_12085001 RAL-83 859 chr3L 12356472 12356499 chr3L 12356623 12356650 12 150 4.5 4.0 4.2 2.3 178 chr3L 12356472 intergenic not near genes chr3L 12356561 intergenic not near genes chr3L 12356650 intergenic not near genes chr3L_12_12355001 chr3L_12355001 RAL-83 860 chr3L 12369544 12369568 chr3L 12369631 12369658 8 90 1.0 1.5 1.2 3.6 114 chr3L 12369544 intron Ncc69 - chr3L 12369601 intron Ncc69 - chr3L 12369658 intron Ncc69 - chr3L_8_12365001 chr3L_12365001 RAL-83 861 chr3L 12476289 12476323 chr3L 12476365 12476399 4 75 3.5 5.5 4.5 0.7 110 chr3L 12476289 intron CG10663 - chr3L 12476344 intron CG10663 - chr3L 12476399 intron CG10663 - chr3L_4_12475001 chr3L_12475001 RAL-83 862 chr3L 12654399 12654410 chr3L 12654479 12654490 7 79 2.0 1.5 1.8 2.5 91 chr3L 12654399 intergenic not near genes chr3L 12654444 intergenic not near genes chr3L 12654490 intergenic not near genes chr3L_7_12650001 chr3L_12650001 RAL-83 863 chr3L 12668065 12668100 chr3L 12668150 12668185 10 85 2.5 2.0 2.2 3.1 120 chr3L 12668065 intergenic not near genes chr3L 12668125 intergenic not near genes chr3L 12668185 intergenic not near genes chr3L_10_12665001 chr3L_12665001 RAL-83 864 chr3L 12801993 12802013 chr3L 12802057 12802087 6 68 2.5 2.0 2.2 1.9 94 chr3L 12801993 intron Atg1 - chr3L 12802040 intron Atg1 - chr3L 12802087 intron Atg1 - chr3L_6_12800001 chr3L_12800001 RAL-83 865 chr3L 12808665 12808688 chr3L 12808746 12808767 6 81 2.0 7.0 4.5 1.1 102 chr3L 12808665 intron Sap130 + chr3L 12808716 intron Sap130 + chr3L 12808767 intron,5` UTR Sap130 +,CG32110 + chr3L_6_12805001 chr3L_12805001 RAL-83 866 chr3L 12894802 12894817 chr3L 12894880 12894894 5 77 7.0 6.5 6.8 0.6 92 chr3L 12894802 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894894 intergenic CG14118 + chr3L_5_12890001 chr3L_12890001 RAL-83 867 chr3L 12919276 12919311 chr3L 12924760 12924767 Rt1c 5 5477 4.0 3.0 3.5 1.1 5491 chr3L 12919276 intergenic not near genes chr3L 12922022 intergenic not near genes chr3L 12924767 intergenic not near genes chr3L_5_12920001 chr3L_12920001 RAL-83 868 chr3L 12938245 12938281 chr3L 12938325 12938359 11 78 3.0 1.5 2.2 3.4 114 chr3L 12938245 intergenic not near genes chr3L 12938302 intergenic not near genes chr3L 12938359 intergenic not near genes chr3L_11_12935001 chr3L_12935001 RAL-83 869 chr3L 12948030 12948048 chr3L 12948108 12948126 7 78 4.5 4.0 4.2 1.3 96 chr3L 12948030 intergenic not near genes chr3L 12948078 intergenic not near genes chr3L 12948126 intergenic not near genes chr3L_7_12945001 chr3L_12945001 RAL-83 870 chr3L 12968172 12968208 chr3L 12968257 12968293 17 82 4.5 4.5 4.5 3.1 121 chr3L 12968172 intergenic Or69a - chr3L 12968232 intergenic Or69a - chr3L 12968293 intergenic not near genes chr3L_17_12965001 chr3L_12965001 RAL-83 871 chr3L 12975723 12975755 chr3L 12975806 12975838 5 83 2.5 1.5 2.0 1.7 115 chr3L 12975723 intergenic not near genes chr3L 12975780 intergenic not near genes chr3L 12975838 intergenic not near genes chr3L_5_12975001 chr3L_12975001 RAL-83 872 chr3L 13007692 13007723 chr3L 13007771 13007794 5 76 0.5 1.0 0.8 2.8 102 chr3L 13007692 exon CG11263 + chr3L 13007743 3` UTR CG11263 + chr3L 13007794 3` UTR CG11263 + chr3L_5_13005001 chr3L_13005001 RAL-83 873 chr3L 13095816 13095836 chr3L 13095904 13095924 6 88 2.5 0.5 1.5 2.4 108 chr3L 13095816 intergenic not near genes chr3L 13095870 intergenic not near genes chr3L 13095924 intergenic not near genes chr3L_6_13095001 chr3L_13095001 RAL-83 874 chr3L 13206236 13206265 chr3L 13206318 13206347 10 82 3.0 3.5 3.2 2.4 111 chr3L 13206236 intergenic not near genes chr3L 13206292 intergenic not near genes chr3L 13206347 intergenic not near genes chr3L_10_13205001 chr3L_13205001 RAL-83 875 chr3L 13213725 13213755 chr3L 13213802 13213832 10 74 5.5 4.0 4.8 1.7 107 chr3L 13213725 intergenic not near genes chr3L 13213778 intergenic not near genes chr3L 13213832 intergenic not near genes chr3L_10_13210001 chr3L_13210001 RAL-83 876 chr3L 13432298 13432325 chr3L 13432397 13432424 9 99 3.5 7.0 5.2 1.5 126 chr3L 13432298 intron CG10713 - chr3L 13432361 intron CG10713 - chr3L 13432424 intron CG10713 - chr3L_9_13430001 chr3L_13430001 RAL-83 877 chr3L 13525155 13525186 chr3L 13532951 13532982 roo 14 7793 2.5 5.0 3.8 2.9 7827 chr3L 13525155 intergenic not near genes chr3L 13529068 intergenic not near genes chr3L 13532982 intergenic not near genes chr3L_14_13525001 chr3L_13525001 RAL-83 878 chr3L 13629530 13629548 chr3L 13629640 13629659 9 111 1.5 6.5 4.0 1.8 129 chr3L 13629530 intron bru-3 - chr3L 13629594 intron bru-3 - chr3L 13629659 intron bru-3 - chr3L_9_13625001 chr3L_13625001 RAL-83 879 chr3L 13766910 13766918 chr3L 13767008 13767016 4 98 2.5 3.0 2.8 1.1 106 chr3L 13766910 intron bru-3 - chr3L 13766963 intron bru-3 - chr3L 13767016 intron bru-3 - chr3L_4_13765001 chr3L_13765001 RAL-83 880 chr3L 13901574 13901600 chr3L 13901647 13901677 4 76 0.0 3.0 1.5 1.6 103 chr3L 13901574 intron dysc - chr3L 13901626 intron dysc - chr3L 13901677 intron dysc - chr3L_4_13900001 chr3L_13900001 RAL-83 881 chr3L 13931340 13931371 chr3L 13931445 13931456 9 101 1.0 2.5 1.8 3.2 116 chr3L 13931340 intron Gl + chr3L 13931398 intron Gl + chr3L 13931456 intron Gl + chr3L_9_13930001 chr3L_13930001 RAL-83 882 chr3L 13988746 13988755 chr3L 13989749 13989759 5 1003 4.0 7.0 5.5 0.8 1013 chr3L 13988746 intron CG17364 - chr3L 13989252 intron CG17364 - chr3L 13989759 intron CG17364 - chr3L_5_13985001 chr3L_13985001 RAL-83 883 chr3L 13988741 13988768 chr3L 13990350 13990377 5 1609 4.0 11.0 7.5 0.6 1636 chr3L 13988741 intron CG17364 - chr3L 13989559 intron CG17364 - chr3L 13990377 intron CG17364 - chr3L_5_13985001 chr3L_13985001 RAL-83 884 chr3L 14245567 14245590 chr3L 14245661 14245683 1360 8 93 5.5 3.5 4.5 1.5 116 chr3L 14245567 3` UTR CR44561 - chr3L 14245625 3` UTR CR44561 - chr3L 14245683 3` UTR CR44561 - chr3L_8_14245001 chr3L_14245001 RAL-83 885 chr3L 14282596 14282604 chr3L 14282676 14282683 4 80 7.5 9.5 8.5 0.4 87 chr3L 14282596 intron fz + chr3L 14282640 intron fz + chr3L 14282683 intron fz + chr3L_4_14280001 chr3L_14280001 RAL-83 886 chr3L 14295980 14296014 chr3L 14296466 14296499 roo 15 483 4.0 3.0 3.5 3.3 519 chr3L 14295980 intron fz + chr3L 14296240 intron fz + chr3L 14296499 intron fz + chr3L_15_14295001 chr3L_14295001 RAL-83 887 chr3L 14302936 14302948 chr3L 14303022 14303034 4 85 9.5 6.0 7.8 0.5 98 chr3L 14302936 intron fz + chr3L 14302985 intron fz + chr3L 14303034 intron fz + chr3L_4_14300001 chr3L_14300001 RAL-83 888 chr3L 14302952 14302962 chr3L 14303020 14303048 5 76 6.5 5.5 6.0 0.7 96 chr3L 14302952 intron fz + chr3L 14303000 intron fz + chr3L 14303048 intron fz + chr3L_5_14300001 chr3L_14300001 RAL-83 889 chr3L 14439214 14439234 chr3L 14439376 14439379 6 159 3.0 1.0 2.0 2.0 165 chr3L 14439214 intron bbg - chr3L 14439296 intron bbg - chr3L 14439379 intron bbg - chr3L_6_14435001 chr3L_14435001 RAL-83 890 chr3L 14468450 14468478 chr3L 14473655 14473684 copia 8 5205 1.5 5.5 3.5 1.8 5234 chr3L 14468450 intron bbg - chr3L 14471067 intron bbg - chr3L 14473684 intron bbg - chr3L_8_14470001 chr3L_14470001 RAL-83 891 chr3L 14486018 14486035 chr3L 14486099 14486112 5 80 4.5 3.0 3.8 1.0 94 chr3L 14486018 intron bbg - chr3L 14486065 intron bbg - chr3L 14486112 intron bbg - chr3L_5_14485001 chr3L_14485001 RAL-83 892 chr3L 14587587 14587600 chr3L 14587869 14587880 4 281 1.0 4.0 2.5 1.1 293 chr3L 14587587 intron HGTX - chr3L 14587734 intron HGTX - chr3L 14587880 intron HGTX - chr3L_4_14585001 chr3L_14585001 RAL-83 893 chr3L 14633787 14633817 chr3L 14633883 14633913 5 96 2.0 1.0 1.5 2.0 126 chr3L 14633787 intron dlp + chr3L 14633850 intron dlp + chr3L 14633913 intron dlp + chr3L_5_14630001 chr3L_14630001 RAL-83 894 chr3L 14652645 14652669 chr3L 14652724 14652747 17 79 3.0 4.5 3.8 3.5 102 chr3L 14652645 intron dlp + chr3L 14652696 intron dlp + chr3L 14652747 intron dlp + chr3L_17_14650001 chr3L_14650001 RAL-83 895 chr3L 14693542 14693574 chr3L 14693641 14693668 10 98 5.0 3.5 4.2 1.9 126 chr3L 14693542 intron ome + chr3L 14693605 intron ome + chr3L 14693668 intron ome + chr3L_10_14690001 chr3L_14690001 RAL-83 896 chr3L 14721184 14721206 chr3L 14723025 14723049 Rt1c 8 1840 5.0 4.0 4.5 1.5 1865 chr3L 14721184 intron ome + chr3L 14722116 intron ome + chr3L 14723049 intron ome + chr3L_8_14720001 chr3L_14720001 RAL-83 897 chr3L 14725213 14725231 chr3L 14725513 14725536 5 301 4.5 0.5 2.5 1.4 323 chr3L 14725213 intron ome + chr3L 14725374 intron ome + chr3L 14725536 intron ome + chr3L_5_14725001 chr3L_14725001 RAL-83 898 chr3L 14731225 14731246 chr3L 14731415 14731425 5 187 3.0 2.0 2.5 1.4 200 chr3L 14731225 intron ome + chr3L 14731325 intron ome + chr3L 14731425 intron ome + chr3L_5_14730001 chr3L_14730001 RAL-83 899 chr3L 14741150 14741169 chr3L 14741228 14741246 4 78 1.0 3.5 2.2 1.2 96 chr3L 14741150 intron ome + chr3L 14741198 intron ome + chr3L 14741246 intron ome + chr3L_4_14740001 chr3L_14740001 RAL-83 900 chr3L 14895030 14895058 chr3L 14895170 14895198 4 140 3.5 2.0 2.8 1.1 168 chr3L 14895030 intergenic not near genes chr3L 14895114 intergenic not near genes chr3L 14895198 intergenic not near genes chr3L_4_14895001 chr3L_14895001 RAL-83 901 chr3L 15085053 15085085 chr3L 15086217 15086249 1360 5 1159 1.0 1.0 1.0 2.5 1196 chr3L 15085053 intron cp309 - chr3L 15085651 intron cp309 - chr3L 15086249 intron cp309 - chr3L_5_15085001 chr3L_15085001 RAL-83 902 chr3L 15185915 15185925 chr3L 15186194 15186204 7 279 2.0 5.0 3.5 1.6 289 chr3L 15185915 intergenic not near genes chr3L 15186060 intergenic not near genes chr3L 15186204 intergenic not near genes chr3L_7_15185001 chr3L_15185001 RAL-83 903 chr3L 15209065 15209097 chr3L 15209151 15209183 6 86 1.0 0.0 0.5 4.0 118 chr3L 15209065 intergenic CG6888 + chr3L 15209124 intergenic not near genes chr3L 15209183 intergenic not near genes chr3L_6_15205001 chr3L_15205001 RAL-83 904 chr3L 15233555 15233584 chr3L 15233634 15233665 4 80 1.5 1.5 1.5 1.6 110 chr3L 15233555 intergenic not near genes chr3L 15233610 intergenic not near genes chr3L 15233665 intergenic not near genes chr3L_4_15230001 chr3L_15230001 RAL-83 905 chr3L 15260017 15260040 chr3L 15260099 15260120 4 81 4.5 3.0 3.8 0.8 103 chr3L 15260017 intergenic not near genes chr3L 15260068 intergenic not near genes chr3L 15260120 intergenic not near genes chr3L_4_15260001 chr3L_15260001 RAL-83 906 chr3L 15273341 15273357 chr3L 15273487 15273502 4 146 0.0 4.0 2.0 1.3 161 chr3L 15273341 intergenic not near genes chr3L 15273422 intergenic not near genes chr3L 15273502 intergenic not near genes chr3L_4_15270001 chr3L_15270001 RAL-83 907 chr3L 15384957 15384986 chr3L 15385085 15385113 10 124 2.5 0.5 1.5 4.0 156 chr3L 15384957 intergenic not near genes chr3L 15385035 intergenic not near genes chr3L 15385113 intergenic not near genes chr3L_10_15385001 chr3L_15385001 RAL-83 908 chr3L 15423762 15423783 chr3L 15426606 15426627 opus 8 2844 3.5 4.5 4.0 1.6 2865 chr3L 15423762 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426627 intergenic not near genes chr3L_8_15425001 chr3L_15425001 RAL-83 909 chr3L 15444650 15444658 chr3L 15444744 15444752 5 94 8.0 1.5 4.8 0.9 102 chr3L 15444650 intergenic not near genes chr3L 15444701 intergenic not near genes chr3L 15444752 intergenic not near genes chr3L_5_15440001 chr3L_15440001 RAL-83 910 chr3L 15444667 15444684 chr3L 15444743 15444773 7 90 3.0 1.5 2.2 2.2 106 chr3L 15444667 intergenic not near genes chr3L 15444720 intergenic not near genes chr3L 15444773 intergenic not near genes chr3L_7_15440001 chr3L_15440001 RAL-83 911 chr3L 15466037 15466138 chr3L 15466119 15466233 7 85 0.0 0.0 0.0 7.0 196 chr3L 15466037 intergenic not near genes chr3L 15466135 intergenic not near genes chr3L 15466233 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-83 912 chr3L 15472652 15472657 chr3L 15472729 15472734 4 77 13.0 16.5 14.8 0.3 82 chr3L 15472652 exon CG7804 - chr3L 15472693 exon CG7804 - chr3L 15472734 exon CG7804 - chr3L_4_15470001 chr3L_15470001 RAL-83 913 chr3L 15482313 15482347 chr3L 15482415 15482449 10 101 1.5 2.5 2.0 3.3 136 chr3L 15482313 intergenic not near genes chr3L 15482381 intergenic not near genes chr3L 15482449 intergenic not near genes chr3L_10_15480001 chr3L_15480001 RAL-83 914 chr3L 15541624 15541634 chr3L 15541714 15541723 4 90 3.5 1.5 2.5 1.1 99 chr3L 15541624 intron CrebA + chr3L 15541674 intron CrebA + chr3L 15541723 intron CrebA + chr3L_4_15540001 chr3L_15540001 RAL-83 915 chr3L 15543693 15543707 chr3L 15543933 15543951 5 243 3.5 2.5 3.0 1.2 258 chr3L 15543693 intron CrebA + chr3L 15543822 intron CrebA + chr3L 15543951 intron CrebA + chr3L_5_15540001 chr3L_15540001 RAL-83 916 chr3L 15633182 15633213 chr3L 15633262 15633289 6 78 3.0 1.0 2.0 2.0 107 chr3L 15633182 intron comm3 - chr3L 15633236 intron comm3 - chr3L 15633289 intron comm3 - chr3L_6_15630001 chr3L_15630001 RAL-83 917 chr3L 15742960 15742988 chr3L 15743121 15743148 5 159 5.0 0.0 2.5 1.4 188 chr3L 15742960 intergenic not near genes chr3L 15743054 intergenic not near genes chr3L 15743148 intergenic not near genes chr3L_5_15740001 chr3L_15740001 RAL-83 918 chr3L 15871289 15871322 chr3L 15871493 15871526 7 204 2.5 3.5 3.0 1.8 237 chr3L 15871289 intron pHCl - chr3L 15871408 intron pHCl - chr3L 15871526 intron pHCl - chr3L_7_15870001 chr3L_15870001 RAL-83 919 chr3L 15899237 15899257 chr3L 15899785 15899824 jockey 4 555 3.5 1.0 2.2 1.2 587 chr3L 15899237 intergenic pHCl - chr3L 15899530 intergenic not near genes chr3L 15899824 intergenic sff - chr3L_4_15895001 chr3L_15895001 RAL-83 920 chr3L 15914331 15914342 chr3L 15914428 15914433 7 97 4.5 6.5 5.5 1.1 102 chr3L 15914331 intron sff - chr3L 15914382 intron sff - chr3L 15914433 intron sff - chr3L_7_15910001 chr3L_15910001 RAL-83 921 chr3L 15929195 15929217 chr3L 15938342 15938364 roo 4 9147 5.0 2.0 3.5 0.9 9169 chr3L 15929195 intron Pka-C3 - chr3L 15933780 intron Pka-C3 - chr3L 15938364 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 RAL-83 922 chr3L 16184103 16184132 chr3L 16188922 16188951 X-element 7 4819 1.5 1.5 1.5 2.8 4848 chr3L 16184103 intergenic not near genes chr3L 16186527 intergenic not near genes chr3L 16188951 intergenic not near genes chr3L_7_16185001 chr3L_16185001 RAL-83 923 chr3L 16212816 16212832 chr3L 16212905 16212922 4 90 1.0 0.0 0.5 2.7 106 chr3L 16212816 intergenic CG13073 - chr3L 16212869 intergenic CG13073 - chr3L 16212922 intergenic CG13073 - chr3L_4_16210001 chr3L_16210001 RAL-83 924 chr3L 16239938 16239949 chr3L 16240014 16240025 4 76 1.5 2.5 2.0 1.3 87 chr3L 16239938 intergenic l(3)72Dr + chr3L 16239982 intergenic not near genes chr3L 16240025 intergenic not near genes chr3L_4_16235001 chr3L_16235001 RAL-83 925 chr3L 16275883 16275904 chr3L 16276341 16276362 10 457 3.0 4.0 3.5 2.2 479 chr3L 16275883 intergenic not near genes chr3L 16276122 intergenic not near genes chr3L 16276362 intergenic not near genes chr3L_10_16275001 chr3L_16275001 RAL-83 926 chr3L 16443850 16443878 chr3L 16446190 16446213 Doc 8 2339 2.0 3.0 2.5 2.3 2363 chr3L 16443850 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446213 intron,intron CG33158 +,dsx-c73A - chr3L_8_16445001 chr3L_16445001 RAL-83 927 chr3L 16450019 16450053 chr3L 16450104 16450138 6 82 0.5 1.0 0.8 3.3 119 chr3L 16450019 intron,intron CG33158 +,dsx-c73A - chr3L 16450078 intron,intron CG33158 +,dsx-c73A - chr3L 16450138 intron,intron CG33158 +,dsx-c73A - chr3L_6_16450001 chr3L_16450001 RAL-83 928 chr3L 16498537 16498552 chr3L 16498637 16498660 6 106 7.0 0.0 3.5 1.3 123 chr3L 16498537 intron,exon CG43373 -,st + chr3L 16498598 intron,intron CG43373 -,st + chr3L 16498660 intron,intron CG43373 -,st + chr3L_6_16495001 chr3L_16495001 RAL-83 929 chr3L 16533576 16533583 chr3L 16533686 16533694 4 111 1.5 3.5 2.5 1.1 118 chr3L 16533576 intron CG43373 - chr3L 16533635 intron CG43373 - chr3L 16533694 intron CG43373 - chr3L_4_16530001 chr3L_16530001 RAL-83 930 chr3L 16616513 16616532 chr3L 16621841 16621858 297 5 5327 1.0 2.5 1.8 1.8 5345 chr3L 16616513 3` UTR Abl - chr3L 16619186 3` UTR Abl - chr3L 16621858 3` UTR Abl - chr3L_5_16615001 chr3L_16615001 RAL-83 931 chr3L 16652681 16652710 chr3L 16652760 16652789 11 78 2.5 1.0 1.8 3.9 108 chr3L 16652681 intron Baldspot - chr3L 16652735 intron Baldspot - chr3L 16652789 intron Baldspot - chr3L_11_16650001 chr3L_16650001 RAL-83 932 chr3L 16698390 16698408 chr3L 16698477 16698504 4 89 3.0 2.0 2.5 1.1 114 chr3L 16698390 intron,intron Lasp -,CG43954 - chr3L 16698447 intron,intron Lasp -,CG43954 - chr3L 16698504 intron,intron Lasp -,CG43954 - chr3L_4_16695001 chr3L_16695001 RAL-83 933 chr3L 16745579 16745603 chr3L 16745648 16745680 15 73 2.0 3.5 2.8 3.9 101 chr3L 16745579 intergenic not near genes chr3L 16745630 intergenic not near genes chr3L 16745680 intergenic not near genes chr3L_15_16745001 chr3L_16745001 RAL-83 934 chr3L 16818746 16818780 chr3L 16818822 16818856 9 76 2.5 2.0 2.2 2.8 110 chr3L 16818746 intron,intron nudC +,CG13024 - chr3L 16818801 intron,intron nudC +,CG13024 - chr3L 16818856 intron,intron nudC +,CG13024 - chr3L_9_16815001 chr3L_16815001 RAL-83 935 chr3L 16885820 16885836 chr3L 16885906 16885921 4 85 1.5 1.0 1.2 1.8 101 chr3L 16885820 intron Lmpt + chr3L 16885870 intron Lmpt + chr3L 16885921 intron Lmpt + chr3L_4_16885001 chr3L_16885001 RAL-83 936 chr3L 16945737 16945745 chr3L 16954887 16954898 roo 5 9152 4.0 0.5 2.2 1.6 9161 chr3L 16945737 exon Obp73a + chr3L 16950318 intergenic not near genes chr3L 16954898 5` UTR Nc73EF + chr3L_5_16950001 chr3L_16950001 RAL-83 937 chr3L 16945749 16945760 chr3L 16954884 16954911 roo 7 9144 4.0 0.5 2.2 2.2 9162 chr3L 16945749 exon Obp73a + chr3L 16950330 intergenic not near genes chr3L 16954911 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-83 938 chr3L 17085005 17085032 chr3L 17094154 17094173 roo 5 9147 1.5 3.0 2.2 1.6 9168 chr3L 17085005 intron Rbp6 - chr3L 17089589 intron Rbp6 - chr3L 17094173 intron Rbp6 - chr3L_5_17085001 chr3L_17085001 RAL-83 939 chr3L 17272241 17272251 chr3L 17272373 17272383 4 132 2.5 4.5 3.5 0.9 142 chr3L 17272241 intergenic not near genes chr3L 17272312 intergenic not near genes chr3L 17272383 intergenic not near genes chr3L_4_17270001 chr3L_17270001 RAL-83 940 chr3L 17331068 17331097 chr3L 17331158 17331187 9 90 2.0 3.0 2.5 2.6 119 chr3L 17331068 intergenic not near genes chr3L 17331128 intergenic not near genes chr3L 17331187 intergenic not near genes chr3L_9_17330001 chr3L_17330001 RAL-83 941 chr3L 17516981 17517008 chr3L 17524539 17524565 412 10 7557 5.0 6.5 5.8 1.5 7584 chr3L 17516981 intron CG7564 + chr3L 17520773 intron CG7564 + chr3L 17524565 3` UTR CG7564 + chr3L_10_17520001 chr3L_17520001 RAL-83 942 chr3L 17580587 17580601 chr3L 17580763 17580777 7 176 3.5 1.0 2.2 2.2 190 chr3L 17580587 intron Eip74EF - chr3L 17580682 intron Eip74EF - chr3L 17580777 intron Eip74EF - chr3L_7_17580001 chr3L_17580001 RAL-83 943 chr3L 17773206 17773237 chr3L 17773303 17773334 4 97 4.0 3.0 3.5 0.9 128 chr3L 17773206 intergenic not near genes chr3L 17773270 intergenic not near genes chr3L 17773334 intergenic not near genes chr3L_4_17770001 chr3L_17770001 RAL-83 944 chr3L 17782353 17782373 chr3L 17782629 17782647 7 276 0.0 6.5 3.2 1.7 294 chr3L 17782353 intergenic not near genes chr3L 17782500 intergenic not near genes chr3L 17782647 intergenic not near genes chr3L_7_17780001 chr3L_17780001 RAL-83 945 chr3L 17790192 17790230 chr3L 17790305 17790347 6 114 3.5 1.5 2.5 1.7 155 chr3L 17790192 intergenic not near genes chr3L 17790270 intergenic not near genes chr3L 17790347 intergenic not near genes chr3L_6_17790001 chr3L_17790001 RAL-83 946 chr3L 17799572 17799579 chr3L 17799653 17799660 5 81 2.5 3.0 2.8 1.3 88 chr3L 17799572 intron NUCB1 - chr3L 17799616 intron NUCB1 - chr3L 17799660 intron NUCB1 - chr3L_5_17795001 chr3L_17795001 RAL-83 947 chr3L 17827283 17827317 chr3L 17827374 17827392 5 88 2.5 3.0 2.8 1.3 109 chr3L 17827283 intron Grd + chr3L 17827338 intron Grd + chr3L 17827392 intron Grd + chr3L_5_17825001 chr3L_17825001 RAL-83 948 chr3L 17918372 17918402 chr3L 17921175 17921190 opus 5 2800 2.0 0.5 1.2 2.3 2818 chr3L 17918372 intergenic not near genes chr3L 17919781 intergenic not near genes chr3L 17921190 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-83 949 chr3L 17938580 17938598 chr3L 17939093 17939111 5 513 5.0 2.5 3.8 1.0 531 chr3L 17938580 intron CG43174 + chr3L 17938846 intron CG43174 + chr3L 17939111 intron CG43174 + chr3L_5_17935001 chr3L_17935001 RAL-83 950 chr3L 17968156 17968169 chr3L 17968213 17968248 4 68 1.0 3.0 2.0 1.3 92 chr3L 17968156 intron Eip75B - chr3L 17968202 intron Eip75B - chr3L 17968248 intron Eip75B - chr3L_4_17965001 chr3L_17965001 RAL-83 951 chr3L 18006222 18006250 chr3L 18006346 18006374 6 124 3.0 3.0 3.0 1.5 152 chr3L 18006222 intron Eip75B - chr3L 18006298 intron Eip75B - chr3L 18006374 intron Eip75B - chr3L_6_18005001 chr3L_18005001 RAL-83 952 chr3L 18092784 18092800 chr3L 18092896 18092915 11 114 5.0 0.0 2.5 3.1 131 chr3L 18092784 intron CG13698 - chr3L 18092850 intron CG13698 - chr3L 18092915 intron CG13698 - chr3L_11_18090001 chr3L_18090001 RAL-83 953 chr3L 18107727 18107753 chr3L 18107814 18107830 5 85 0.0 4.0 2.0 1.7 103 chr3L 18107727 intergenic CG5147 -,mRpS26 + chr3L 18107778 intergenic CG5147 -,mRpS26 + chr3L 18107830 intergenic CG5147 -,mRpS26 + chr3L_5_18105001 chr3L_18105001 RAL-83 954 chr3L 18118678 18118694 chr3L 18118776 18118793 6 99 2.5 3.0 2.8 1.6 115 chr3L 18118678 3` UTR,intron CG32195 +,CG7341 + chr3L 18118736 3` UTR,intron CG32195 +,CG7341 + chr3L 18118793 3` UTR,intron CG32195 +,CG7341 + chr3L_6_18115001 chr3L_18115001 RAL-83 955 chr3L 18203592 18203606 chr3L 18203687 18203701 5 95 3.0 0.0 1.5 2.0 109 chr3L 18203592 3` UTR CG7320 + chr3L 18203646 intergenic CG7320 + chr3L 18203701 intergenic CG7320 + chr3L_5_18200001 chr3L_18200001 RAL-83 956 chr3L 18223166 18223186 chr3L 18223249 18223269 4 83 1.5 0.5 1.0 2.0 103 chr3L 18223166 intergenic not near genes chr3L 18223218 intergenic not near genes chr3L 18223269 intergenic not near genes chr3L_4_18220001 chr3L_18220001 RAL-83 957 chr3L 18376086 18376112 chr3L 18376175 18376201 12 89 2.0 0.0 1.0 6.0 115 chr3L 18376086 intergenic not near genes chr3L 18376144 intergenic not near genes chr3L 18376201 intergenic not near genes chr3L_12_18375001 chr3L_18375001 RAL-83 958 chr3L 18426940 18426953 chr3L 18427035 18427059 5 101 3.0 7.0 5.0 0.8 119 chr3L 18426940 intergenic not near genes chr3L 18427000 intergenic not near genes chr3L 18427059 intergenic not near genes chr3L_5_18425001 chr3L_18425001 RAL-83 959 chr3L 18436106 18436122 chr3L 18436254 18436268 5 148 2.0 0.0 1.0 2.5 162 chr3L 18436106 intergenic not near genes chr3L 18436187 intergenic not near genes chr3L 18436268 intergenic not near genes chr3L_5_18435001 chr3L_18435001 RAL-83 960 chr3L 18456273 18456292 chr3L 18456361 18456380 4 88 4.0 2.5 3.2 1.0 107 chr3L 18456273 intergenic CR44670 - chr3L 18456326 intergenic CR44670 - chr3L 18456380 intergenic CR44670 - chr3L_4_18455001 chr3L_18455001 RAL-83 961 chr3L 18506137 18506151 chr3L 18509600 18509614 F-element 4 3463 1.5 1.0 1.2 1.8 3477 chr3L 18506137 intergenic not near genes chr3L 18507876 intergenic not near genes chr3L 18509614 intergenic not near genes chr3L_4_18505001 chr3L_18505001 RAL-83 962 chr3L 18606754 18606779 chr3L 18606951 18606964 7 193 3.5 3.5 3.5 1.6 210 chr3L 18606754 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606859 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606964 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_7_18605001 chr3L_18605001 RAL-83 963 chr3L 18629079 18629113 chr3L 18629449 18629467 13 367 1.0 2.5 1.8 4.6 388 chr3L 18629079 intron MYPT-75D + chr3L 18629273 intron MYPT-75D + chr3L 18629467 intron MYPT-75D + chr3L_13_18625001 chr3L_18625001 RAL-83 964 chr3L 18679673 18679701 chr3L 18679779 18679807 13 103 3.0 4.0 3.5 2.9 134 chr3L 18679673 intergenic not near genes chr3L 18679740 intergenic not near genes chr3L 18679807 intergenic not near genes chr3L_13_18675001 chr3L_18675001 RAL-83 965 chr3L 18753547 18753556 chr3L 18753629 18753638 5 81 3.0 1.0 2.0 1.7 91 chr3L 18753547 intron ftz-f1 - chr3L 18753592 intron ftz-f1 - chr3L 18753638 intron ftz-f1 - chr3L_5_18750001 chr3L_18750001 RAL-83 966 chr3L 18772406 18772437 chr3L 18781087 18781117 roo 9 8681 1.5 3.0 2.2 2.8 8711 chr3L 18772406 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781117 intron ftz-f1 - chr3L_9_18775001 chr3L_18775001 RAL-83 967 chr3L 18820882 18820903 chr3L 18821061 18821082 5 179 1.5 2.0 1.8 1.8 200 chr3L 18820882 intergenic CG14073 -,HipHop + chr3L 18820982 intergenic HipHop +,CG14073 - chr3L 18821082 intergenic HipHop +,CG14073 - chr3L_5_18820001 chr3L_18820001 RAL-83 968 chr3L 18832614 18832644 chr3L 18832692 18832712 11 72 2.0 4.5 3.2 2.6 98 chr3L 18832614 intron Indy - chr3L 18832663 intron Indy - chr3L 18832712 intron Indy - chr3L_11_18830001 chr3L_18830001 RAL-83 969 chr3L 18833778 18833805 chr3L 18834941 18834969 1360 8 1163 3.0 3.0 3.0 2.0 1191 chr3L 18833778 intron Indy - chr3L 18834374 intron Indy - chr3L 18834969 intron Indy - chr3L_8_18830001 chr3L_18830001 RAL-83 970 chr3L 18839741 18839767 chr3L 18839824 18839850 5 83 3.0 4.5 3.8 1.0 109 chr3L 18839741 intron Indy - chr3L 18839796 intron Indy - chr3L 18839850 intron Indy - chr3L_5_18835001 chr3L_18835001 RAL-83 971 chr3L 18929957 18929989 chr3L 18930040 18930071 7 83 1.0 3.5 2.2 2.2 114 chr3L 18929957 intron CG32204 - chr3L 18930014 intron CG32204 - chr3L 18930071 exon CG32204 - chr3L_7_18930001 chr3L_18930001 RAL-83 972 chr3L 18932358 18932361 chr3L 18932489 18932493 5 132 3.5 3.0 3.2 1.2 135 chr3L 18932358 intron CG32204 - chr3L 18932426 intron CG32204 - chr3L 18932493 intron CG32204 - chr3L_5_18930001 chr3L_18930001 RAL-83 973 chr3L 19008857 19008869 chr3L 19009194 19009207 jockey 5 338 2.5 5.0 3.8 1.0 350 chr3L 19008857 intron nkd - chr3L 19009032 intron nkd - chr3L 19009207 intron nkd - chr3L_5_19005001 chr3L_19005001 RAL-83 974 chr3L 19029450 19029476 chr3L 19029552 19029578 11 93 6.5 4.5 5.5 1.7 128 chr3L 19029450 intron nkd - chr3L 19029514 intron nkd - chr3L 19029578 intron nkd - chr3L_11_19025001 chr3L_19025001 RAL-83 975 chr3L 19082035 19082069 chr3L 19082137 19082171 18 100 2.5 3.5 3.0 4.5 136 chr3L 19082035 intron Mkp3 - chr3L 19082103 intron Mkp3 - chr3L 19082171 intron Mkp3 - chr3L_18_19080001 chr3L_19080001 RAL-83 976 chr3L 19111368 19111371 chr3L 19111455 19111457 4 86 2.5 9.0 5.8 0.6 89 chr3L 19111368 intron CG14082 - chr3L 19111412 intron CG14082 - chr3L 19111457 intron CG14082 - chr3L_4_19110001 chr3L_19110001 RAL-83 977 chr3L 19115643 19115677 chr3L 19115821 19115824 BS 11 171 5.0 5.0 5.0 1.8 181 chr3L 19115643 intron CG14082 - chr3L 19115734 intron CG14082 - chr3L 19115824 intron CG14082 - chr3L_11_19115001 chr3L_19115001 RAL-83 978 chr3L 19117046 19117072 chr3L 19124492 19124519 mdg1 10 7443 5.5 6.0 5.8 1.5 7473 chr3L 19117046 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124519 intron CG14082 - chr3L_10_19120001 chr3L_19120001 RAL-83 979 chr3L 19138556 19138582 chr3L 19138637 19138639 13 76 3.0 6.0 4.5 2.4 83 chr3L 19138556 intron CG14082 - chr3L 19138598 intron CG14082 - chr3L 19138639 intron CG14082 - chr3L_13_19135001 chr3L_19135001 RAL-83 980 chr3L 19159846 19159858 chr3L 19159938 19159952 5 94 11.0 4.5 7.8 0.6 106 chr3L 19159846 intron fz2 - chr3L 19159899 intron fz2 - chr3L 19159952 intron fz2 - chr3L_5_19155001 chr3L_19155001 RAL-83 981 chr3L 19182395 19182419 chr3L 19182476 19182500 9 81 0.0 2.0 1.0 4.5 105 chr3L 19182395 intron fz2 - chr3L 19182448 intron fz2 - chr3L 19182500 intron fz2 - chr3L_9_19180001 chr3L_19180001 RAL-83 982 chr3L 19208058 19208092 chr3L 19209432 19209461 Doc 16 1369 4.0 5.0 4.5 2.9 1403 chr3L 19208058 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209461 intron fz2 - chr3L_16_19205001 chr3L_19205001 RAL-83 983 chr3L 19411772 19411784 chr3L 19411933 19411948 4 161 3.0 0.5 1.8 1.4 176 chr3L 19411772 intron CG32206 - chr3L 19411860 intron CG32206 - chr3L 19411948 intron CG32206 - chr3L_4_19410001 chr3L_19410001 RAL-83 984 chr3L 19425722 19425750 chr3L 19425852 19425881 6 125 3.0 3.0 3.0 1.5 159 chr3L 19425722 intergenic not near genes chr3L 19425802 intergenic not near genes chr3L 19425881 intergenic not near genes chr3L_6_19425001 chr3L_19425001 RAL-83 985 chr3L 19426749 19426781 chr3L 19426826 19426859 12 77 2.5 4.0 3.2 2.9 110 chr3L 19426749 intergenic not near genes chr3L 19426804 intergenic not near genes chr3L 19426859 intergenic not near genes chr3L_12_19425001 chr3L_19425001 RAL-83 986 chr3L 19527922 19527941 chr3L 19528001 19528020 4 79 5.5 1.0 3.2 1.0 98 chr3L 19527922 intergenic not near genes chr3L 19527971 intergenic not near genes chr3L 19528020 intergenic not near genes chr3L_4_19525001 chr3L_19525001 RAL-83 987 chr3L 19695428 19695454 chr3L 19695507 19695533 5 76 4.0 4.5 4.2 1.0 105 chr3L 19695428 intergenic verm - chr3L 19695480 intergenic verm - chr3L 19695533 intergenic verm - chr3L_5_19695001 chr3L_19695001 RAL-83 988 chr3L 19861827 19861852 chr3L 19863614 19863640 S-element 9 1786 3.5 3.5 3.5 2.0 1813 chr3L 19861827 5` UTR CR45433 + chr3L 19862734 intergenic not near genes chr3L 19863640 intergenic not near genes chr3L_9_19860001 chr3L_19860001 RAL-83 989 chr3L 19981217 19981235 chr3L 19981288 19981315 4 78 1.5 1.0 1.2 1.8 98 chr3L 19981217 intergenic CG17732 + chr3L 19981266 intergenic CG17732 + chr3L 19981315 intergenic CG17732 + chr3L_4_19980001 chr3L_19980001 RAL-83 990 chr3L 20143083 20143115 chr3L 20143163 20143195 9 80 4.0 5.0 4.5 1.6 112 chr3L 20143083 intergenic not near genes chr3L 20143139 intergenic not near genes chr3L 20143195 intergenic not near genes chr3L_9_20140001 chr3L_20140001 RAL-83 991 chr3L 20590062 20590097 chr3L 20590601 20590633 412 14 531 5.0 4.5 4.8 2.4 571 chr3L 20590062 intergenic not near genes chr3L 20590348 intergenic not near genes chr3L 20590633 intergenic not near genes chr3L_14_20590001 chr3L_20590001 RAL-83 992 chr3L 20699907 20699932 chr3L 20699979 20700012 11 74 3.0 4.0 3.5 2.4 105 chr3L 20699907 intergenic not near genes chr3L 20699960 intergenic not near genes chr3L 20700012 intergenic not near genes chr3L_11_20695001 chr3L_20695001 RAL-83 993 chr3L 20710757 20710780 chr3L 20710834 20710857 6 77 2.5 1.0 1.8 2.1 100 chr3L 20710757 intergenic not near genes chr3L 20710807 intergenic not near genes chr3L 20710857 intergenic not near genes chr3L_6_20710001 chr3L_20710001 RAL-83 994 chr3L 21014920 21014931 chr3L 21023395 21023402 Tirant 4 8477 6.0 2.5 4.2 0.8 8482 chr3L 21014920 intron skd - chr3L 21019161 intron skd - chr3L 21023402 intron skd - chr3L_4_21015001 chr3L_21015001 RAL-83 995 chr3L 21151867 21151894 chr3L 21156951 21156978 flea 8 5084 2.0 2.5 2.2 2.5 5111 chr3L 21151867 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21156978 intron Ac78C - chr3L_8_21150001 chr3L_21150001 RAL-83 996 chr3L 21191031 21191061 chr3L 21191118 21191145 8 80 2.0 1.5 1.8 2.9 114 chr3L 21191031 intron CG42337 - chr3L 21191088 intron CG42337 - chr3L 21191145 intron CG42337 - chr3L_8_21190001 chr3L_21190001 RAL-83 997 chr3L 21346341 21346350 chr3L 21346584 21346592 4 243 2.0 3.0 2.5 1.1 251 chr3L 21346341 intron,intron CG32436 +,ebd2 - chr3L 21346466 intron,intron CG32436 +,ebd2 - chr3L 21346592 intron,intron CG32436 +,ebd2 - chr3L_4_21345001 chr3L_21345001 RAL-83 998 chr3L 21407001 21407026 chr3L 21407079 21407102 7 76 3.0 4.0 3.5 1.6 101 chr3L 21407001 intron rgn + chr3L 21407052 intron rgn + chr3L 21407102 intron rgn + chr3L_7_21405001 chr3L_21405001 RAL-83 999 chr3L 21498841 21498860 chr3L 21500477 21500496 1360 9 1634 1.0 2.5 1.8 3.2 1655 chr3L 21498841 intron Glg1 - chr3L 21499668 intron Glg1 - chr3L 21500496 intron Glg1 - chr3L_9_21495001 chr3L_21495001 RAL-83 1000 chr3L 21639197 21639225 chr3L 21639276 21639304 7 79 1.5 1.0 1.2 3.2 107 chr3L 21639197 intergenic CG32444 +,CG32445 + chr3L 21639250 intergenic CG32445 +,CG32444 + chr3L 21639304 intergenic CG32445 +,CG32444 + chr3L_7_21635001 chr3L_21635001 RAL-83 1001 chr3L 21656995 21657013 chr3L 21657088 21657106 7 91 6.5 1.0 3.8 1.5 111 chr3L 21656995 intron CG43980 + chr3L 21657050 intron CG43980 + chr3L 21657106 intron CG43980 + chr3L_7_21655001 chr3L_21655001 RAL-83 1002 chr3L 21749315 21749351 chr3L 21754475 21754476 Doc 14 5153 3.0 6.5 4.8 2.4 5161 chr3L 21749315 intron Syn1 - chr3L 21751896 intron Syn1 - chr3L 21754476 intron Syn1 - chr3L_14_21750001 chr3L_21750001 RAL-83 1003 chr3L 21776677 21776692 chr3L 21776764 21776779 5 85 3.0 6.0 4.5 0.9 102 chr3L 21776677 intron,intron CG42689 +,CG42552 + chr3L 21776728 intron,intron CG42689 +,CG42552 + chr3L 21776779 intron,intron CG42689 +,CG42552 + chr3L_5_21775001 chr3L_21775001 RAL-83 1004 chr3L 21852264 21852280 chr3L 21852351 21852373 4 92 7.5 4.5 6.0 0.6 109 chr3L 21852264 intron mub + chr3L 21852318 intron mub + chr3L 21852373 intron mub + chr3L_4_21850001 chr3L_21850001 RAL-83 1005 chr3L 21872425 21872447 chr3L 21872504 21872526 6 79 2.5 2.5 2.5 1.7 101 chr3L 21872425 intron mub + chr3L 21872476 intron mub + chr3L 21872526 intron mub + chr3L_6_21870001 chr3L_21870001 RAL-83 1006 chr3L 21936526 21936552 chr3L 21936618 21936644 4 92 3.0 0.0 1.5 1.6 118 chr3L 21936526 intron CG7442 + chr3L 21936585 intron CG7442 + chr3L 21936644 intron CG7442 + chr3L_4_21935001 chr3L_21935001 RAL-83 1007 chr3L 22016842 22016861 chr3L 22016981 22017002 6 140 1.5 6.0 3.8 1.2 160 chr3L 22016842 intergenic not near genes chr3L 22016922 intergenic not near genes chr3L 22017002 intergenic not near genes chr3L_6_22015001 chr3L_22015001 RAL-83 1008 chr3L 22023219 22023248 chr3L 22023309 22023339 10 89 2.5 3.5 3.0 2.5 120 chr3L 22023219 intergenic not near genes chr3L 22023279 intergenic not near genes chr3L 22023339 intergenic not near genes chr3L_10_22020001 chr3L_22020001 RAL-83 1009 chr3L 22169458 22169487 chr3L 22169550 22169579 10 93 2.0 1.5 1.8 3.6 121 chr3L 22169458 intron olf413 + chr3L 22169518 intron olf413 + chr3L 22169579 intron olf413 + chr3L_10_22165001 chr3L_22165001 RAL-83 1010 chr3L 22312304 22312311 chr3L 22312710 22312740 6 423 3.0 3.5 3.2 1.4 436 chr3L 22312304 intron Ten-m - chr3L 22312522 intron Ten-m - chr3L 22312740 intron Ten-m - chr3L_6_22310001 chr3L_22310001 RAL-83 1011 chr3L 22447196 22447225 chr3L 22447287 22447316 5 88 3.0 3.5 3.2 1.2 120 chr3L 22447196 intergenic not near genes chr3L 22447256 intergenic not near genes chr3L 22447316 intergenic not near genes chr3L_5_22445001 chr3L_22445001 RAL-83 1012 chr3L 22477053 22477083 chr3L 22477144 22477173 5 88 1.0 5.0 3.0 1.2 120 chr3L 22477053 intergenic not near genes chr3L 22477113 intergenic not near genes chr3L 22477173 intergenic not near genes chr3L_5_22475001 chr3L_22475001 RAL-83 1013 chr3L 22522707 22522724 chr3L 22522782 22522801 5 76 2.0 4.5 3.2 1.2 94 chr3L 22522707 intergenic not near genes chr3L 22522754 intergenic not near genes chr3L 22522801 intergenic not near genes chr3L_5_22520001 chr3L_22520001 RAL-83 1014 chr3L 22539066 22539077 chr3L 22539300 22539311 5 233 9.0 2.5 5.8 0.7 245 chr3L 22539066 intergenic not near genes chr3L 22539188 intergenic not near genes chr3L 22539311 intergenic not near genes chr3L_5_22535001 chr3L_22535001 RAL-83 1015 chr3L 22540690 22540714 chr3L 22540770 22540801 8 83 2.5 2.5 2.5 2.3 111 chr3L 22540690 intergenic not near genes chr3L 22540746 intergenic not near genes chr3L 22540801 intergenic not near genes chr3L_8_22540001 chr3L_22540001 RAL-83 1016 chr3L 22563702 22563735 chr3L 22563790 22563823 7 80 6.0 3.0 4.5 1.3 121 chr3L 22563702 intergenic not near genes chr3L 22563762 intergenic not near genes chr3L 22563823 intergenic not near genes chr3L_7_22560001 chr3L_22560001 RAL-83 1017 chr3L 22577625 22577648 chr3L 22582413 22582436 Doc 10 4788 5.0 5.0 5.0 1.7 4811 chr3L 22577625 intergenic not near genes chr3L 22580030 intergenic not near genes chr3L 22582436 3` UTR CG14459 - chr3L_10_22580001 chr3L_22580001 RAL-83 1018 chr3L 22617195 22617219 chr3L 22624643 22624671 blood 6 7451 2.5 4.5 3.5 1.3 7476 chr3L 22617195 intron CG14459 - chr3L 22620933 intron CG14459 - chr3L 22624671 intron CG14459 - chr3L_6_22620001 chr3L_22620001 RAL-83 1019 chr3L 22701608 22701633 chr3L 22701690 22701698 6 74 4.5 6.0 5.2 1.0 90 chr3L 22701608 intergenic not near genes chr3L 22701653 intergenic not near genes chr3L 22701698 intergenic not near genes chr3L_6_22700001 chr3L_22700001 RAL-83 1020 chr3L 22737823 22737841 chr3L 22737891 22737922 7 79 2.5 9.0 5.8 1.0 99 chr3L 22737823 intron CG11241 - chr3L 22737872 intron CG11241 - chr3L 22737922 intron CG11241 - chr3L_7_22735001 chr3L_22735001 RAL-83 1021 chr3L 22848776 22848798 chr3L 22848941 22848963 4 165 1.0 6.5 3.8 0.8 187 chr3L 22848776 intergenic not near genes chr3L 22848870 intergenic not near genes chr3L 22848963 intergenic not near genes chr3L_4_22845001 chr3L_22845001 RAL-83 1022 chr3L 22897196 22897218 chr3L 22897277 22897299 14 80 8.0 3.0 5.5 2.2 103 chr3L 22897196 intergenic not near genes chr3L 22897248 intergenic not near genes chr3L 22897299 intergenic not near genes chr3L_14_22895001 chr3L_22895001 RAL-83 1023 chr3L 22966440 22966452 chr3L 22966645 22966676 5 217 2.0 5.0 3.5 1.1 236 chr3L 22966440 intergenic not near genes chr3L 22966558 intergenic not near genes chr3L 22966676 intergenic not near genes chr3L_5_22965001 chr3L_22965001 RAL-83 1024 chr3L 22989863 22989894 chr3L 22996836 22996868 297 5 6972 3.5 2.5 3.0 1.2 7005 chr3L 22989863 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996868 intergenic not near genes chr3L_5_22990001 chr3L_22990001 RAL-83 1025 chr3L 23436984 23437008 chr3L 23437131 23437155 9 144 5.5 2.0 3.8 1.9 171 chr3L 23436984 intergenic not near genes chr3L 23437070 intergenic not near genes chr3L 23437155 intergenic not near genes chr3L_9_23435001 chr3L_23435001 RAL-83 1026 chr3L 23721330 23721362 chr3L 23721406 23721438 13 75 3.0 2.5 2.8 3.4 108 chr3L 23721330 intergenic not near genes chr3L 23721384 intergenic not near genes chr3L 23721438 intergenic not near genes chr3L_13_23720001 chr3L_23720001 RAL-83 1027 chr3L 23750927 23750962 chr3L 23751128 23751163 13 201 30.0 25.5 27.8 0.5 236 chr3L 23750927 intergenic not near genes chr3L 23751045 intergenic not near genes chr3L 23751163 intergenic not near genes chr3L_13_23750001 chr3L_23750001 RAL-83 1028 chr3L 24168796 24168804 chr3L 24176115 24176118 ZAM 5 7320 9.5 3.0 6.2 0.7 7322 chr3L 24168796 intron Snap25 + chr3L 24172457 intron Snap25 + chr3L 24176118 intron Snap25 + chr3L_5_24170001 chr3L_24170001 RAL-83 1029 chr3L 27347488 27347499 chr3L 27347564 27347585 4 84 1.5 1.5 1.5 1.6 97 chr3L 27347488 intron Dbp80 + chr3L 27347536 intron Dbp80 + chr3L 27347585 intron Dbp80 + chr3L_4_27345001 chr3L_27345001 RAL-83 1030 chr3L 27390697 27390711 chr3L 27390767 27390788 4 76 26.0 30.0 28.0 0.1 91 chr3L 27390697 intron Dbp80 + chr3L 27390742 intron Dbp80 + chr3L 27390788 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-83 1031 chr3R 2534141 2534150 chr3R 2541706 2541719 6 7568 11.5 20.0 15.8 0.4 7578 chr3R 2534141 intergenic not near genes chr3R 2537930 intergenic not near genes chr3R 2541719 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-83 1032 chr3R 2534154 2534166 chr3R 2541701 2541712 10 7554 9.0 19.5 14.2 0.7 7558 chr3R 2534154 intergenic not near genes chr3R 2537933 intergenic not near genes chr3R 2541712 intergenic not near genes chr3R_10_2535001 chr3R_2535001 RAL-83 1033 chr3R 4063809 4063829 chr3R 4069089 4069109 4 5280 6.5 7.0 6.8 0.5 5300 chr3R 4063809 intergenic not near genes chr3R 4066459 intergenic not near genes chr3R 4069109 intergenic not near genes chr3R_4_4065001 chr3R_4065001 RAL-83 1034 chr3R 4245516 4245540 chr3R 4246141 4246157 INE-1 5 621 1.0 2.5 1.8 1.8 641 chr3R 4245516 intergenic not near genes chr3R 4245836 intergenic not near genes chr3R 4246157 intergenic not near genes chr3R_5_4245001 chr3R_4245001 RAL-83 1035 chr3R 4408410 4408437 chr3R 4412714 4412741 Juan 5 4302 1.0 3.0 2.0 1.7 4331 chr3R 4408410 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412741 intron CG32944 - chr3R_5_4410001 chr3R_4410001 RAL-83 1036 chr3R 4599307 4599330 chr3R 4599391 4599414 7 83 4.0 2.5 3.2 1.7 107 chr3R 4599307 intron CR44317 - chr3R 4599360 intron CR44317 - chr3R 4599414 intron CR44317 - chr3R_7_4595001 chr3R_4595001 RAL-83 1037 chr3R 4697057 4697074 chr3R 4697144 4697161 9 87 6.5 4.0 5.2 1.5 104 chr3R 4697057 intron CG43427 + chr3R 4697109 intron CG43427 + chr3R 4697161 intron CG43427 + chr3R_9_4695001 chr3R_4695001 RAL-83 1038 chr3R 4697077 4697084 chr3R 4697142 4697171 6 82 5.5 3.0 4.2 1.2 94 chr3R 4697077 intron CG43427 + chr3R 4697124 intron CG43427 + chr3R 4697171 intron CG43427 + chr3R_6_4695001 chr3R_4695001 RAL-83 1039 chr3R 4719474 4719496 chr3R 4719682 4719704 4 208 1.0 0.5 0.8 2.2 230 chr3R 4719474 3` UTR Nep2 - chr3R 4719589 3` UTR Nep2 - chr3R 4719704 3` UTR Nep2 - chr3R_4_4715001 chr3R_4715001 RAL-83 1040 chr3R 4753241 4753266 chr3R 4757544 4757564 F-element 5 4302 10.5 3.5 7.0 0.6 4323 chr3R 4753241 intron,intron atms +,CG44098 - chr3R 4755402 intron,intron atms +,CG44098 - chr3R 4757564 intron,exon atms +,CG44098 - chr3R_5_4755001 chr3R_4755001 RAL-83 1041 chr3R 4769159 4769186 chr3R 4769237 4769264 7 78 4.5 4.0 4.2 1.3 105 chr3R 4769159 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769264 intron,intron atms +,CG44098 - chr3R_7_4765001 chr3R_4765001 RAL-83 1042 chr3R 4887486 4887512 chr3R 4894857 4894888 rover 7 7375 4.0 4.5 4.2 1.3 7402 chr3R 4887486 intergenic not near genes chr3R 4891187 intergenic not near genes chr3R 4894888 intergenic not near genes chr3R_7_4890001 chr3R_4890001 RAL-83 1043 chr3R 4966018 4966035 chr3R 4966110 4966127 5 90 3.5 3.0 3.2 1.2 109 chr3R 4966018 intron CG1124 + chr3R 4966072 intron CG1124 + chr3R 4966127 intron CG1124 + chr3R_5_4965001 chr3R_4965001 RAL-83 1044 chr3R 5067979 5068009 chr3R 5073496 5073526 mdg3 7 5517 1.0 2.5 1.8 2.5 5547 chr3R 5067979 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073526 intergenic not near genes chr3R_7_5070001 chr3R_5070001 RAL-83 1045 chr3R 5081124 5081137 chr3R 5081216 5081238 5 99 0.5 5.5 3.0 1.2 114 chr3R 5081124 3` UTR corto - chr3R 5081181 3` UTR corto - chr3R 5081238 3` UTR corto - chr3R_5_5080001 chr3R_5080001 RAL-83 1046 chr3R 5138331 5138358 chr3R 5138674 5138677 4 332 2.0 3.0 2.5 1.1 346 chr3R 5138331 5` UTR CG12589 - chr3R 5138504 5` UTR CG12589 - chr3R 5138677 5` UTR CG12589 - chr3R_4_5135001 chr3R_5135001 RAL-83 1047 chr3R 5161960 5161967 chr3R 5162034 5162044 4 75 0.5 0.5 0.5 2.7 84 chr3R 5161960 intron dpr16 + chr3R 5162002 intron dpr16 + chr3R 5162044 intron dpr16 + chr3R_4_5160001 chr3R_5160001 RAL-83 1048 chr3R 5193903 5193917 chr3R 5194017 5194031 6 114 5.5 2.0 3.8 1.2 128 chr3R 5193903 intron cno - chr3R 5193967 intron cno - chr3R 5194031 intron cno - chr3R_6_5190001 chr3R_5190001 RAL-83 1049 chr3R 5338399 5338425 chr3R 5343576 5343602 Rt1c 8 5173 4.5 5.0 4.8 1.4 5203 chr3R 5338399 intron mtd - chr3R 5341000 intron mtd - chr3R 5343602 intron mtd - chr3R_8_5340001 chr3R_5340001 RAL-83 1050 chr3R 5351903 5351931 chr3R 5352899 5352927 8 996 15.0 32.5 23.8 0.3 1024 chr3R 5351903 intergenic not near genes chr3R 5352415 intergenic not near genes chr3R 5352927 intergenic not near genes chr3R_8_5350001 chr3R_5350001 RAL-83 1051 chr3R 5385973 5386002 chr3R 5386144 5386163 9 168 1.5 6.5 4.0 1.8 190 chr3R 5385973 intron kkv - chr3R 5386068 intron kkv - chr3R 5386163 intron kkv - chr3R_9_5385001 chr3R_5385001 RAL-83 1052 chr3R 5437998 5438023 chr3R 5438080 5438105 6 80 3.0 4.0 3.5 1.3 107 chr3R 5437998 intron CG14669 + chr3R 5438052 intron CG14669 + chr3R 5438105 intron CG14669 + chr3R_6_5435001 chr3R_5435001 RAL-83 1053 chr3R 5445980 5445991 chr3R 5452422 5452451 Burdock 4 6456 1.0 2.5 1.8 1.4 6471 chr3R 5445980 intron CG14669 + chr3R 5449216 intron CG14669 + chr3R 5452451 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-83 1054 chr3R 5746020 5746045 chr3R 5746261 5746286 pogo 8 241 4.0 8.5 6.2 1.1 266 chr3R 5746020 3` UTR Madm + chr3R 5746153 3` UTR Madm + chr3R 5746286 3` UTR Madm + chr3R_8_5745001 chr3R_5745001 RAL-83 1055 chr3R 5769232 5769260 chr3R 5769330 5769358 12 98 2.0 0.5 1.2 5.5 126 chr3R 5769232 intron CG2082 - chr3R 5769295 intron CG2082 - chr3R 5769358 intron CG2082 - chr3R_12_5765001 chr3R_5765001 RAL-83 1056 chr3R 5772380 5772409 chr3R 5772538 5772567 6 158 1.0 3.0 2.0 2.0 187 chr3R 5772380 intron CG2082 - chr3R 5772474 intron CG2082 - chr3R 5772567 intron CG2082 - chr3R_6_5770001 chr3R_5770001 RAL-83 1057 chr3R 5809113 5809142 chr3R 5809354 5809383 pogo 5 240 3.0 1.5 2.2 1.6 270 chr3R 5809113 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809383 3` UTR CG11000 + chr3R_5_5805001 chr3R_5805001 RAL-83 1058 chr3R 5822393 5822410 chr3R 5823544 5823577 1360 5 1160 2.0 2.0 2.0 1.7 1184 chr3R 5822393 3` UTR CG2023 - chr3R 5822985 3` UTR CG2023 - chr3R 5823577 3` UTR CG2023 - chr3R_5_5820001 chr3R_5820001 RAL-83 1059 chr3R 5911006 5911034 chr3R 5911089 5911116 7 82 3.0 2.0 2.5 2.0 110 chr3R 5911006 intron CG34113 - chr3R 5911061 intron CG34113 - chr3R 5911116 intron CG34113 - chr3R_7_5910001 chr3R_5910001 RAL-83 1060 chr3R 5927565 5927585 chr3R 5927799 5927820 pogo 6 234 3.0 2.5 2.8 1.6 255 chr3R 5927565 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927820 intron CG34113 - chr3R_6_5925001 chr3R_5925001 RAL-83 1061 chr3R 5988901 5988931 chr3R 5989102 5989131 7 201 4.0 3.5 3.8 1.5 230 chr3R 5988901 intergenic CR44927 + chr3R 5989016 intergenic CR44927 + chr3R 5989131 intergenic CR44927 + chr3R_7_5985001 chr3R_5985001 RAL-83 1062 chr3R 6015969 6015991 chr3R 6024470 6024487 Tirant 12 8500 3.0 3.0 3.0 3.0 8518 chr3R 6015969 intergenic not near genes chr3R 6020228 intergenic not near genes chr3R 6024487 intergenic not near genes chr3R_12_6020001 chr3R_6020001 RAL-83 1063 chr3R 6061174 6061204 chr3R 6061291 6061321 7 117 16.0 7.0 11.5 0.6 147 chr3R 6061174 intergenic not near genes chr3R 6061248 intergenic not near genes chr3R 6061321 intergenic not near genes chr3R_7_6060001 chr3R_6060001 RAL-83 1064 chr3R 6060870 6060887 chr3R 6061247 6061264 7 378 29.5 9.5 19.5 0.3 394 chr3R 6060870 intergenic not near genes chr3R 6061067 intergenic not near genes chr3R 6061264 intergenic not near genes chr3R_7_6060001 chr3R_6060001 RAL-83 1065 chr3R 6076524 6076551 chr3R 6076627 6076654 7 103 1.0 0.5 0.8 3.9 130 chr3R 6076524 intergenic Or83c - chr3R 6076589 intergenic Or83c - chr3R 6076654 intergenic Or83c - chr3R_7_6075001 chr3R_6075001 RAL-83 1066 chr3R 6131969 6131976 chr3R 6132042 6132053 6 76 1.0 5.5 3.2 1.4 84 chr3R 6131969 intergenic not near genes chr3R 6132011 intergenic not near genes chr3R 6132053 intergenic not near genes chr3R_6_6130001 chr3R_6130001 RAL-83 1067 chr3R 6158512 6158542 chr3R 6167093 6167098 Tirant 6 8577 3.5 5.5 4.5 1.1 8586 chr3R 6158512 intergenic not near genes chr3R 6162805 intergenic not near genes chr3R 6167098 intergenic CG1077 + chr3R_6_6160001 chr3R_6160001 RAL-83 1068 chr3R 6226621 6226653 chr3R 6226709 6226741 8 86 1.5 1.0 1.2 3.6 120 chr3R 6226621 intergenic not near genes chr3R 6226681 intergenic not near genes chr3R 6226741 intergenic not near genes chr3R_8_6225001 chr3R_6225001 RAL-83 1069 chr3R 6325696 6325722 chr3R 6325934 6325961 8 238 2.0 1.0 1.5 3.2 265 chr3R 6325696 intron Osi17 + chr3R 6325828 intron Osi17 + chr3R 6325961 intron Osi17 + chr3R_8_6325001 chr3R_6325001 RAL-83 1070 chr3R 6474816 6474844 chr3R 6474892 6474921 5 77 0.5 3.0 1.8 1.8 105 chr3R 6474816 intergenic not near genes chr3R 6474868 intergenic not near genes chr3R 6474921 intergenic not near genes chr3R_5_6470001 chr3R_6470001 RAL-83 1071 chr3R 6737498 6737506 chr3R 6739285 6739293 Doc 6 1786 8.0 2.5 5.2 1.0 1795 chr3R 6737498 intron pb - chr3R 6738396 intron pb - chr3R 6739293 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-83 1072 chr3R 6737508 6737524 chr3R 6739284 6739311 Doc 7 1785 5.0 2.5 3.8 1.5 1803 chr3R 6737508 intron pb - chr3R 6738410 intron pb - chr3R 6739311 intron pb - chr3R_7_6735001 chr3R_6735001 RAL-83 1073 chr3R 6804199 6804230 chr3R 6804308 6804339 14 109 2.0 2.0 2.0 4.7 140 chr3R 6804199 intergenic not near genes chr3R 6804269 intergenic not near genes chr3R 6804339 intergenic not near genes chr3R_14_6800001 chr3R_6800001 RAL-83 1074 chr3R 6828024 6828037 chr3R 6828100 6828113 5 76 1.0 2.5 1.8 1.8 89 chr3R 6828024 intron Scr - chr3R 6828068 intron Scr - chr3R 6828113 intron Scr - chr3R_5_6825001 chr3R_6825001 RAL-83 1075 chr3R 6862234 6862250 chr3R 6862321 6862337 4 87 5.0 3.5 4.2 0.8 103 chr3R 6862234 intergenic not near genes chr3R 6862286 intergenic not near genes chr3R 6862337 intergenic not near genes chr3R_4_6860001 chr3R_6860001 RAL-83 1076 chr3R 6967723 6967751 chr3R 6967815 6967839 4 91 4.5 2.0 3.2 1.0 116 chr3R 6967723 intron Antp - chr3R 6967781 intron Antp - chr3R 6967839 intron Antp - chr3R_4_6965001 chr3R_6965001 RAL-83 1077 chr3R 7210608 7210612 chr3R 7210694 7210698 6 85 0.5 8.5 4.5 1.1 90 chr3R 7210608 intergenic not near genes chr3R 7210653 intergenic not near genes chr3R 7210698 intergenic not near genes chr3R_6_7210001 chr3R_7210001 RAL-83 1078 chr3R 7217457 7217466 chr3R 7217678 7217678 5 219 4.0 1.0 2.5 1.4 221 chr3R 7217457 intergenic CG14605 -,CG14606 - chr3R 7217568 intergenic CG14605 -,CG14606 - chr3R 7217678 3` UTR CG14605 - chr3R_5_7215001 chr3R_7215001 RAL-83 1079 chr3R 7367833 7367865 chr3R 7367971 7368002 6 138 1.5 0.0 0.8 3.3 169 chr3R 7367833 exon MstProx - chr3R 7367918 exon MstProx - chr3R 7368002 exon MstProx - chr3R_6_7365001 chr3R_7365001 RAL-83 1080 chr3R 7447991 7448011 chr3R 7448069 7448089 7 78 3.0 2.0 2.5 2.0 98 chr3R 7447991 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448089 intergenic not near genes chr3R_7_7445001 chr3R_7445001 RAL-83 1081 chr3R 7618000 7618021 chr3R 7618092 7618112 4 92 2.0 5.5 3.8 0.8 112 chr3R 7618000 intron CG34127 - chr3R 7618056 intron CG34127 - chr3R 7618112 intron CG34127 - chr3R_4_7615001 chr3R_7615001 RAL-83 1082 chr3R 7621549 7621562 chr3R 7621639 7621652 8 90 0.5 5.0 2.8 2.1 103 chr3R 7621549 intron CG34127 - chr3R 7621600 intron CG34127 - chr3R 7621652 intron CG34127 - chr3R_8_7620001 chr3R_7620001 RAL-83 1083 chr3R 7677924 7677941 chr3R 7678037 7678044 6 109 2.5 2.0 2.2 1.9 120 chr3R 7677924 intron Nlg1 + chr3R 7677984 intron Nlg1 + chr3R 7678044 intron Nlg1 + chr3R_6_7675001 chr3R_7675001 RAL-83 1084 chr3R 7724451 7724473 chr3R 7724530 7724557 10 82 3.5 2.0 2.8 2.6 106 chr3R 7724451 3` UTR CG2616 + chr3R 7724504 3` UTR CG2616 + chr3R 7724557 3` UTR CG2616 + chr3R_10_7720001 chr3R_7720001 RAL-83 1085 chr3R 7849651 7849676 chr3R 7850818 7850839 1360 5 1166 2.0 2.0 2.0 1.7 1188 chr3R 7849651 intron CG34384 + chr3R 7850245 intron CG34384 + chr3R 7850839 intron CG34384 + chr3R_5_7850001 chr3R_7850001 RAL-83 1086 chr3R 7857643 7857671 chr3R 7857726 7857754 10 82 1.5 0.5 1.0 5.0 111 chr3R 7857643 3` UTR CG17816 - chr3R 7857698 3` UTR CG17816 - chr3R 7857754 3` UTR CG17816 - chr3R_10_7855001 chr3R_7855001 RAL-83 1087 chr3R 7883126 7883160 chr3R 7883204 7883238 9 75 3.0 3.5 3.2 2.1 112 chr3R 7883126 intron CG17816 - chr3R 7883182 intron CG17816 - chr3R 7883238 intron CG17816 - chr3R_9_7880001 chr3R_7880001 RAL-83 1088 chr3R 8040656 8040673 chr3R 8040741 8040758 5 85 1.5 1.0 1.2 2.3 102 chr3R 8040656 intergenic not near genes chr3R 8040707 intergenic not near genes chr3R 8040758 intergenic CG43060 + chr3R_5_8040001 chr3R_8040001 RAL-83 1089 chr3R 8094412 8094439 chr3R 8099717 8099737 Transpac 4 5303 2.0 4.0 3.0 1.0 5325 chr3R 8094412 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099737 intron CG7900 + chr3R_4_8095001 chr3R_8095001 RAL-83 1090 chr3R 8101766 8101792 chr3R 8104850 8104876 G2 8 3084 4.0 2.0 3.0 2.0 3110 chr3R 8101766 exon CG7900 + chr3R 8103321 intron CG7900 + chr3R 8104876 3` UTR CG7900 + chr3R_8_8100001 chr3R_8100001 RAL-83 1091 chr3R 8339246 8339247 chr3R 21907534 21907536 7 13568289 20.0 22.5 21.2 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 RAL-83 1092 chr3R 8393571 8393605 chr3R 8393655 8393674 9 78 2.0 0.0 1.0 4.5 103 chr3R 8393571 intron CG45263 - chr3R 8393622 intron CG45263 - chr3R 8393674 intron CG45263 - chr3R_9_8390001 chr3R_8390001 RAL-83 1093 chr3R 8403009 8403040 chr3R 8412175 8412206 roo 12 9166 4.5 6.0 5.2 1.9 9197 chr3R 8403009 intron CG45263 - chr3R 8407608 intron CG45263 - chr3R 8412206 intron CG45263 - chr3R_12_8405001 chr3R_8405001 RAL-83 1094 chr3R 8482911 8482929 chr3R 8482987 8483005 5 74 1.5 8.0 4.8 0.9 94 chr3R 8482911 intergenic not near genes chr3R 8482958 intergenic not near genes chr3R 8483005 intergenic not near genes chr3R_5_8480001 chr3R_8480001 RAL-83 1095 chr3R 8570478 8570497 chr3R 8575113 8575115 HMS-Beagle 8 4634 7.5 0.5 4.0 1.6 4637 chr3R 8570478 intergenic not near genes chr3R 8572796 intergenic not near genes chr3R 8575115 intergenic not near genes chr3R_8_8570001 chr3R_8570001 RAL-83 1096 chr3R 8601786 8601796 chr3R 8610918 8610949 roo 5 9145 7.5 4.0 5.8 0.7 9163 chr3R 8601786 intron 5-HT2B + chr3R 8606368 intron 5-HT2B + chr3R 8610949 intron 5-HT2B + chr3R_5_8605001 chr3R_8605001 RAL-83 1097 chr3R 8707356 8707389 chr3R 8709797 8709816 jockey 12 2439 3.5 5.0 4.2 2.3 2460 chr3R 8707356 intergenic not near genes chr3R 8708586 intergenic not near genes chr3R 8709816 intergenic not near genes chr3R_12_8705001 chr3R_8705001 RAL-83 1098 chr3R 9118876 9118887 chr3R 9119229 9119241 6 356 4.0 3.5 3.8 1.2 365 chr3R 9118876 intron pum - chr3R 9119058 intron pum - chr3R 9119241 intron pum - chr3R_6_9115001 chr3R_9115001 RAL-83 1099 chr3R 9204250 9204280 chr3R 9204337 9204367 8 86 2.5 3.0 2.8 2.1 117 chr3R 9204250 intron pum - chr3R 9204308 intron pum - chr3R 9204367 intron pum - chr3R_8_9200001 chr3R_9200001 RAL-83 1100 chr3R 9500485 9500518 chr3R 9500564 9500597 13 74 1.0 4.5 2.8 3.4 112 chr3R 9500485 intron RhoL - chr3R 9500541 intron RhoL - chr3R 9500597 intron RhoL - chr3R_13_9500001 chr3R_9500001 RAL-83 1101 chr3R 9836873 9836902 chr3R 9836961 9836990 10 83 3.5 6.0 4.8 1.7 117 chr3R 9836873 intron Teh1 - chr3R 9836932 intron Teh1 - chr3R 9836990 intron Teh1 - chr3R_10_9835001 chr3R_9835001 RAL-83 1102 chr3R 9898792 9898817 chr3R 9898882 9898909 11 91 3.5 1.5 2.5 3.1 117 chr3R 9898792 intron Glut4EF + chr3R 9898850 intron Glut4EF + chr3R 9898909 intron Glut4EF + chr3R_11_9895001 chr3R_9895001 RAL-83 1103 chr3R 10275564 10275578 chr3R 10275641 10275655 4 77 1.0 3.0 2.0 1.3 91 chr3R 10275564 intron CG43143 + chr3R 10275610 intron CG43143 + chr3R 10275655 intron CG43143 + chr3R_4_10275001 chr3R_10275001 RAL-83 1104 chr3R 10308369 10308396 chr3R 10308455 10308482 5 86 2.0 1.5 1.8 1.8 113 chr3R 10308369 3` UTR,3` UTR CG43143 +,CG6293 - chr3R 10308426 3` UTR,3` UTR CG43143 +,CG6293 - chr3R 10308482 3` UTR CG6293 - chr3R_5_10305001 chr3R_10305001 RAL-83 1105 chr3R 10401895 10401924 chr3R 10402084 10402110 6 185 6.0 5.5 5.8 0.9 215 chr3R 10401895 exon mthl11 + chr3R 10402002 intron mthl11 + chr3R 10402110 exon mthl11 + chr3R_6_10400001 chr3R_10400001 RAL-83 1106 chr3R 10424153 10424178 chr3R 10424228 10424258 6 79 4.0 4.5 4.2 1.2 105 chr3R 10424153 intergenic not near genes chr3R 10424206 intergenic not near genes chr3R 10424258 intergenic not near genes chr3R_6_10420001 chr3R_10420001 RAL-83 1107 chr3R 10531869 10531896 chr3R 10531946 10531977 9 77 4.5 3.0 3.8 1.9 108 chr3R 10531869 intron hth - chr3R 10531923 intron hth - chr3R 10531977 intron hth - chr3R_9_10530001 chr3R_10530001 RAL-83 1108 chr3R 10593449 10593462 chr3R 10593530 10593547 9 83 1.0 7.0 4.0 1.8 98 chr3R 10593449 intron hth - chr3R 10593498 intron hth - chr3R 10593547 intron hth - chr3R_9_10590001 chr3R_10590001 RAL-83 1109 chr3R 10651819 10651838 chr3R 10651914 10651937 4 98 2.5 3.5 3.0 1.0 118 chr3R 10651819 intergenic not near genes chr3R 10651878 intergenic not near genes chr3R 10651937 intergenic not near genes chr3R_4_10650001 chr3R_10650001 RAL-83 1110 chr3R 10724952 10724982 chr3R 10725030 10725060 12 77 3.5 4.0 3.8 2.5 108 chr3R 10724952 intergenic not near genes chr3R 10725006 intergenic not near genes chr3R 10725060 intergenic not near genes chr3R_12_10725001 chr3R_10725001 RAL-83 1111 chr3R 10727645 10727678 chr3R 10727722 10727758 7 80 4.5 4.0 4.2 1.3 113 chr3R 10727645 intergenic not near genes chr3R 10727702 intergenic not near genes chr3R 10727758 intergenic not near genes chr3R_7_10725001 chr3R_10725001 RAL-83 1112 chr3R 10731001 10731025 chr3R 10731161 10731191 6 164 3.5 1.5 2.5 1.7 190 chr3R 10731001 intergenic not near genes chr3R 10731096 intergenic not near genes chr3R 10731191 intergenic not near genes chr3R_6_10730001 chr3R_10730001 RAL-83 1113 chr3R 10910999 10911025 chr3R 10911119 10911145 6 119 2.5 2.0 2.2 1.9 146 chr3R 10910999 intergenic not near genes chr3R 10911072 intergenic not near genes chr3R 10911145 intergenic not near genes chr3R_6_10910001 chr3R_10910001 RAL-83 1114 chr3R 10935752 10935777 chr3R 10935834 10935859 5 82 0.5 5.5 3.0 1.2 107 chr3R 10935752 intergenic not near genes chr3R 10935806 intergenic not near genes chr3R 10935859 intergenic not near genes chr3R_5_10935001 chr3R_10935001 RAL-83 1115 chr3R 11043098 11043126 chr3R 11043204 11043232 5 103 3.0 3.5 3.2 1.2 134 chr3R 11043098 intron CG34114 + chr3R 11043165 intron CG34114 + chr3R 11043232 intron CG34114 + chr3R_5_11040001 chr3R_11040001 RAL-83 1116 chr3R 11125679 11125691 chr3R 11126037 11126064 4 369 2.0 2.0 2.0 1.3 385 chr3R 11125679 intergenic not near genes chr3R 11125872 intergenic not near genes chr3R 11126064 intergenic not near genes chr3R_4_11125001 chr3R_11125001 RAL-83 1117 chr3R 11130803 11130833 chr3R 11130975 11131004 7 172 1.0 4.5 2.8 1.8 201 chr3R 11130803 intergenic not near genes chr3R 11130904 intergenic not near genes chr3R 11131004 intergenic not near genes chr3R_7_11130001 chr3R_11130001 RAL-83 1118 chr3R 11174604 11174608 chr3R 11175311 11175322 4 711 26.5 23.5 25.0 0.2 718 chr3R 11174604 exon Ugt86Dj - chr3R 11174963 intron Ugt86Dj - chr3R 11175322 exon Ugt86Dj - chr3R_4_11170001 chr3R_11170001 RAL-83 1119 chr3R 11263500 11263523 chr3R 11263583 11263605 9 81 1.0 2.5 1.8 3.2 105 chr3R 11263500 intergenic not near genes chr3R 11263552 intergenic not near genes chr3R 11263605 intergenic not near genes chr3R_9_11260001 chr3R_11260001 RAL-83 1120 chr3R 11284940 11284972 chr3R 11285021 11285036 11 77 2.0 2.5 2.2 3.4 96 chr3R 11284940 intron CR31386 - chr3R 11284988 intron CR31386 - chr3R 11285036 intron CR31386 - chr3R_11_11280001 chr3R_11280001 RAL-83 1121 chr3R 11307189 11307216 chr3R 11307275 11307285 5 82 2.0 3.0 2.5 1.4 96 chr3R 11307189 intergenic not near genes chr3R 11307237 intergenic not near genes chr3R 11307285 intergenic not near genes chr3R_5_11305001 chr3R_11305001 RAL-83 1122 chr3R 11379237 11379267 chr3R 11388392 11388422 roo 5 9155 1.5 2.0 1.8 1.8 9185 chr3R 11379237 intron pros + chr3R 11383830 intron pros + chr3R 11388422 intron pros + chr3R_5_11380001 chr3R_11380001 RAL-83 1123 chr3R 11461555 11461576 chr3R 11461679 11461682 6 118 5.0 1.5 3.2 1.4 127 chr3R 11461555 intron CG17230 + chr3R 11461618 intron CG17230 + chr3R 11461682 intron CG17230 + chr3R_6_11460001 chr3R_11460001 RAL-83 1124 chr3R 11476950 11476965 chr3R 11477052 11477065 5 99 2.0 2.0 2.0 1.7 115 chr3R 11476950 intergenic not near genes chr3R 11477008 intergenic not near genes chr3R 11477065 intergenic not near genes chr3R_5_11475001 chr3R_11475001 RAL-83 1125 chr3R 11495817 11495843 chr3R 11496146 11496172 12 328 2.5 4.0 3.2 2.9 355 chr3R 11495817 intergenic not near genes chr3R 11495994 intergenic not near genes chr3R 11496172 intergenic not near genes chr3R_12_11495001 chr3R_11495001 RAL-83 1126 chr3R 11684370 11684396 chr3R 11684568 11684594 9 198 4.0 2.5 3.2 2.1 224 chr3R 11684370 intergenic CG6830 -,CG6834 - chr3R 11684482 intergenic CG6830 -,CG6834 - chr3R 11684594 intergenic CG6834 -,CG6830 - chr3R_9_11680001 chr3R_11680001 RAL-83 1127 chr3R 11684648 11684660 chr3R 11687763 11687785 8 3122 3.5 3.5 3.5 1.8 3137 chr3R 11684648 intergenic CG6834 -,CG6830 - chr3R 11686216 exon CG6834 - chr3R 11687785 exon CG6834 - chr3R_8_11685001 chr3R_11685001 RAL-83 1128 chr3R 11695738 11695762 chr3R 11695819 11695842 6 80 3.5 2.5 3.0 1.5 104 chr3R 11695738 intergenic not near genes chr3R 11695790 intergenic not near genes chr3R 11695842 intergenic not near genes chr3R_6_11695001 chr3R_11695001 RAL-83 1129 chr3R 11710209 11710224 chr3R 11710287 11710298 6 77 4.5 5.0 4.8 1.0 89 chr3R 11710209 intergenic not near genes chr3R 11710254 intergenic not near genes chr3R 11710298 intergenic not near genes chr3R_6_11710001 chr3R_11710001 RAL-83 1130 chr3R 11710225 11710236 chr3R 11710282 11710314 6 74 2.0 4.0 3.0 1.5 89 chr3R 11710225 intergenic not near genes chr3R 11710270 intergenic not near genes chr3R 11710314 intergenic not near genes chr3R_6_11710001 chr3R_11710001 RAL-83 1131 chr3R 11734165 11734190 chr3R 11734283 11734303 11 114 4.5 4.0 4.2 2.1 138 chr3R 11734165 intergenic not near genes chr3R 11734234 intergenic not near genes chr3R 11734303 intergenic not near genes chr3R_11_11730001 chr3R_11730001 RAL-83 1132 chr3R 11841060 11841095 chr3R 11846251 11846286 BS 10 5188 6.0 3.0 4.5 1.8 5226 chr3R 11841060 intron CG6959 - chr3R 11843673 intron CG6959 - chr3R 11846286 intron CG6959 - chr3R_10_11840001 chr3R_11840001 RAL-83 1133 chr3R 11919321 11919337 chr3R 11919390 11919424 8 79 3.5 1.5 2.5 2.3 103 chr3R 11919321 intron Cad87A - chr3R 11919372 intron Cad87A - chr3R 11919424 intron Cad87A - chr3R_8_11915001 chr3R_11915001 RAL-83 1134 chr3R 11945384 11945406 chr3R 11945481 11945504 8 98 0.5 3.0 1.8 2.9 120 chr3R 11945384 intron Cad87A - chr3R 11945444 intron Cad87A - chr3R 11945504 intron Cad87A - chr3R_8_11945001 chr3R_11945001 RAL-83 1135 chr3R 11994992 11995021 chr3R 11995071 11995095 6 79 4.5 1.0 2.8 1.6 103 chr3R 11994992 exon Tk - chr3R 11995044 exon Tk - chr3R 11995095 exon Tk - chr3R_6_11995001 chr3R_11995001 RAL-83 1136 chr3R 12154030 12154066 chr3R 12154467 12154492 7 433 18.0 18.5 18.2 0.4 462 chr3R 12154030 intron dpr15 - chr3R 12154261 intron dpr15 - chr3R 12154492 intron dpr15 - chr3R_7_12150001 chr3R_12150001 RAL-83 1137 chr3R 12183191 12183201 chr3R 12183271 12183286 8 85 4.5 3.5 4.0 1.6 95 chr3R 12183191 intergenic not near genes chr3R 12183238 intergenic not near genes chr3R 12183286 intergenic not near genes chr3R_8_12180001 chr3R_12180001 RAL-83 1138 chr3R 12274047 12274069 chr3R 12274133 12274136 5 80 6.0 1.0 3.5 1.1 89 chr3R 12274047 intron svp + chr3R 12274092 intron svp + chr3R 12274136 intron svp + chr3R_5_12270001 chr3R_12270001 RAL-83 1139 chr3R 12429966 12429993 chr3R 12430100 12430112 10 132 6.5 10.5 8.5 1.1 146 chr3R 12429966 exon CG5245 + chr3R 12430039 exon CG5245 + chr3R 12430112 exon CG5245 + chr3R_10_12430001 chr3R_12430001 RAL-83 1140 chr3R 12531903 12531913 chr3R 12531979 12531989 7 76 5.0 3.0 4.0 1.4 86 chr3R 12531903 intron Octbeta3R - chr3R 12531946 intron Octbeta3R - chr3R 12531989 intron Octbeta3R - chr3R_7_12530001 chr3R_12530001 RAL-83 1141 chr3R 12599375 12599405 chr3R 12599458 12599464 12 81 2.5 1.5 2.0 4.0 89 chr3R 12599375 intergenic not near genes chr3R 12599420 intergenic not near genes chr3R 12599464 intergenic not near genes chr3R_12_12595001 chr3R_12595001 RAL-83 1142 chr3R 12733479 12733489 chr3R 12733556 12733566 4 77 7.5 1.0 4.2 0.8 87 chr3R 12733479 intergenic not near genes chr3R 12733522 intergenic not near genes chr3R 12733566 intergenic not near genes chr3R_4_12730001 chr3R_12730001 RAL-83 1143 chr3R 12736295 12736326 chr3R 12736754 12736786 13 455 3.0 4.5 3.8 2.7 491 chr3R 12736295 intergenic not near genes chr3R 12736540 intergenic not near genes chr3R 12736786 intergenic not near genes chr3R_13_12735001 chr3R_12735001 RAL-83 1144 chr3R 12737900 12737934 chr3R 12737988 12738001 6 84 2.5 1.0 1.8 2.1 101 chr3R 12737900 intergenic not near genes chr3R 12737950 intergenic not near genes chr3R 12738001 intergenic not near genes chr3R_6_12735001 chr3R_12735001 RAL-83 1145 chr3R 12742901 12742921 chr3R 12742988 12743011 8 89 3.0 7.0 5.0 1.3 110 chr3R 12742901 exon CG5999 - chr3R 12742956 intron CG5999 - chr3R 12743011 exon CG5999 - chr3R_8_12740001 chr3R_12740001 RAL-83 1146 chr3R 12756268 12756302 chr3R 12756427 12756441 6 151 3.5 3.0 3.2 1.4 173 chr3R 12756268 intron beat-Vc - chr3R 12756354 intron beat-Vc - chr3R 12756441 intron beat-Vc - chr3R_6_12755001 chr3R_12755001 RAL-83 1147 chr3R 12766081 12766108 chr3R 12766201 12766232 10 124 3.5 1.5 2.5 2.9 151 chr3R 12766081 intron beat-Vc - chr3R 12766156 intron beat-Vc - chr3R 12766232 intron beat-Vc - chr3R_10_12765001 chr3R_12765001 RAL-83 1148 chr3R 12787943 12787952 chr3R 12788026 12788035 4 83 1.5 1.0 1.2 1.8 92 chr3R 12787943 intergenic not near genes chr3R 12787989 intergenic not near genes chr3R 12788035 intergenic not near genes chr3R_4_12785001 chr3R_12785001 RAL-83 1149 chr3R 12920158 12920185 chr3R 12925360 12925387 copia 17 5202 2.5 5.0 3.8 3.5 5229 chr3R 12920158 intron beat-Vb + chr3R 12922772 intron beat-Vb + chr3R 12925387 intron beat-Vb + chr3R_17_12920001 chr3R_12920001 RAL-83 1150 chr3R 12953206 12953230 chr3R 12953570 12953592 9 362 3.0 4.0 3.5 2.0 386 chr3R 12953206 intron grsm - chr3R 12953399 intron grsm - chr3R 12953592 intron grsm - chr3R_9_12950001 chr3R_12950001 RAL-83 1151 chr3R 12972555 12972581 chr3R 12972694 12972720 10 139 3.0 0.5 1.8 3.6 165 chr3R 12972555 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972720 intron CG7381 - chr3R_10_12970001 chr3R_12970001 RAL-83 1152 chr3R 13059967 13059975 chr3R 13060162 13060170 5 195 0.5 6.0 3.2 1.2 203 chr3R 13059967 intron sim + chr3R 13060068 intron sim + chr3R 13060170 intron sim + chr3R_5_13060001 chr3R_13060001 RAL-83 1153 chr3R 13067836 13067871 chr3R 13067916 13067950 13 75 4.5 3.5 4.0 2.6 114 chr3R 13067836 intron sim + chr3R 13067893 intron sim + chr3R 13067950 intron sim + chr3R_13_13065001 chr3R_13065001 RAL-83 1154 chr3R 13075374 13075390 chr3R 13075441 13075471 5 77 2.0 2.5 2.2 1.6 97 chr3R 13075374 intron sim + chr3R 13075422 intron sim + chr3R 13075471 intron sim + chr3R_5_13075001 chr3R_13075001 RAL-83 1155 chr3R 13138321 13138354 chr3R 13138409 13138413 14 80 1.0 2.5 1.8 5.0 92 chr3R 13138321 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138367 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138413 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_14_13135001 chr3R_13135001 RAL-83 1156 chr3R 13143042 13143065 chr3R 13148618 13148641 mdg3 9 5571 5.0 7.5 6.2 1.2 5599 chr3R 13143042 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145842 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148641 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 RAL-83 1157 chr3R 13314105 13314126 chr3R 13318893 13318908 Doc 5 4786 0.5 3.0 1.8 1.8 4803 chr3R 13314105 intergenic not near genes chr3R 13316506 intergenic not near genes chr3R 13318908 intergenic CG45080 - chr3R_5_13315001 chr3R_13315001 RAL-83 1158 chr3R 13435388 13435413 chr3R 13435563 13435588 6 175 0.0 1.5 0.8 3.3 200 chr3R 13435388 intergenic yrt - chr3R 13435488 intergenic not near genes chr3R 13435588 intergenic not near genes chr3R_6_13435001 chr3R_13435001 RAL-83 1159 chr3R 13563348 13563359 chr3R 13563425 13563436 7 77 5.5 4.5 5.0 1.2 88 chr3R 13563348 intergenic not near genes chr3R 13563392 intergenic not near genes chr3R 13563436 intergenic not near genes chr3R_7_13560001 chr3R_13560001 RAL-83 1160 chr3R 13603057 13603350 chr3R 13603147 13603442 6 91 4.5 2.0 3.2 1.4 385 chr3R 13603057 intergenic not near genes chr3R 13603250 intergenic not near genes chr3R 13603442 intergenic not near genes chr3R_6_13600001 chr3R_13600001 RAL-83 1161 chr3R 13604071 13604091 chr3R 13604299 13604326 4 228 0.5 2.0 1.2 1.8 255 chr3R 13604071 intergenic not near genes chr3R 13604198 intergenic not near genes chr3R 13604326 intergenic not near genes chr3R_4_13600001 chr3R_13600001 RAL-83 1162 chr3R 13606710 13606735 chr3R 13606852 13606882 9 146 3.0 0.5 1.8 3.2 172 chr3R 13606710 intergenic CG9759 - chr3R 13606796 intergenic CG9759 - chr3R 13606882 intergenic CG9759 - chr3R_9_13605001 chr3R_13605001 RAL-83 1163 chr3R 13659720 13659741 chr3R 13659826 13659846 5 106 0.0 0.0 0.0 5.0 126 chr3R 13659720 intron Hrb87F - chr3R 13659783 intron Hrb87F - chr3R 13659846 intron Hrb87F - chr3R_5_13655001 chr3R_13655001 RAL-83 1164 chr3R 13782054 13782089 chr3R 13782135 13782170 10 81 3.0 5.5 4.2 1.9 116 chr3R 13782054 exon CG9286 + chr3R 13782112 intergenic CG9286 +,Dip-B + chr3R 13782170 intergenic CG9286 +,Dip-B + chr3R_10_13780001 chr3R_13780001 RAL-83 1165 chr3R 13923443 13923467 chr3R 13923520 13923544 8 76 5.5 8.0 6.8 1.0 101 chr3R 13923443 intergenic not near genes chr3R 13923494 intergenic not near genes chr3R 13923544 intergenic not near genes chr3R_8_13920001 chr3R_13920001 RAL-83 1166 chr3R 13941422 13941453 chr3R 13941502 13941533 6 80 1.5 3.0 2.2 1.9 111 chr3R 13941422 intergenic not near genes chr3R 13941478 intergenic not near genes chr3R 13941533 intergenic not near genes chr3R_6_13940001 chr3R_13940001 RAL-83 1167 chr3R 13958563 13958580 chr3R 13958658 13958676 5 96 2.5 4.5 3.5 1.1 113 chr3R 13958563 intergenic Ipp + chr3R 13958620 intergenic Ipp + chr3R 13958676 intergenic Ipp + chr3R_5_13955001 chr3R_13955001 RAL-83 1168 chr3R 14058129 14058155 chr3R 14058249 14058275 5 120 2.0 0.0 1.0 2.5 146 chr3R 14058129 intron foxo + chr3R 14058202 intron foxo + chr3R 14058275 intron foxo + chr3R_5_14055001 chr3R_14055001 RAL-83 1169 chr3R 14067146 14067156 chr3R 14067225 14067234 4 78 4.0 1.0 2.5 1.1 88 chr3R 14067146 exon foxo + chr3R 14067190 intron foxo + chr3R 14067234 intron foxo + chr3R_4_14065001 chr3R_14065001 RAL-83 1170 chr3R 14117438 14117461 chr3R 14117514 14117537 4 76 1.0 2.5 1.8 1.4 99 chr3R 14117438 intron Kif19A - chr3R 14117488 intron Kif19A - chr3R 14117537 intron Kif19A - chr3R_4_14115001 chr3R_14115001 RAL-83 1171 chr3R 14166688 14166701 chr3R 14167313 14167319 15 640 2.5 2.0 2.2 4.7 631 chr3R 14166688 3` UTR Dop1R1 - chr3R 14167004 3` UTR Dop1R1 - chr3R 14167319 3` UTR Dop1R1 - chr3R_15_14165001 chr3R_14165001 RAL-83 1172 chr3R 14174959 14174987 chr3R 14175046 14175073 15 85 4.0 7.0 5.5 2.3 114 chr3R 14174959 3` UTR Dop1R1 - chr3R 14175016 3` UTR Dop1R1 - chr3R 14175073 3` UTR Dop1R1 - chr3R_15_14175001 chr3R_14175001 RAL-83 1173 chr3R 14194436 14194457 chr3R 14203576 14203606 roo 7 9147 6.5 1.5 4.0 1.4 9170 chr3R 14194436 intron Dop1R1 - chr3R 14199021 intron Dop1R1 - chr3R 14203606 intron Dop1R1 - chr3R_7_14195001 chr3R_14195001 RAL-83 1174 chr3R 14246415 14246417 chr3R 14247891 14247912 jockey 4 1487 6.5 7.5 7.0 0.5 1497 chr3R 14246415 intergenic not near genes chr3R 14247164 intergenic not near genes chr3R 14247912 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-83 1175 chr3R 14295528 14295552 chr3R 14295611 14295635 4 83 0.5 0.5 0.5 2.7 107 chr3R 14295528 intron CG12207 + chr3R 14295582 intron CG12207 + chr3R 14295635 intron CG12207 + chr3R_4_14295001 chr3R_14295001 RAL-83 1176 chr3R 14527403 14527415 chr3R 14527479 14527492 10 76 6.5 3.0 4.8 1.7 89 chr3R 14527403 intron Pde6 - chr3R 14527448 intron Pde6 - chr3R 14527492 intron Pde6 - chr3R_10_14525001 chr3R_14525001 RAL-83 1177 chr3R 14565544 14565554 chr3R 14565677 14565685 5 131 1.0 2.5 1.8 1.8 141 chr3R 14565544 intergenic CG14852 + chr3R 14565614 intergenic CG14852 + chr3R 14565685 intergenic CG14852 + chr3R_5_14565001 chr3R_14565001 RAL-83 1178 chr3R 14577959 14577966 chr3R 14578075 14578082 4 116 7.0 2.0 4.5 0.7 123 chr3R 14577959 intron stumps + chr3R 14578020 intron stumps + chr3R 14578082 intron stumps + chr3R_4_14575001 chr3R_14575001 RAL-83 1179 chr3R 14577969 14577990 chr3R 14578073 14578106 12 113 3.0 2.0 2.5 3.4 137 chr3R 14577969 intron stumps + chr3R 14578038 intron stumps + chr3R 14578106 intron stumps + chr3R_12_14575001 chr3R_14575001 RAL-83 1180 chr3R 14608454 14608471 chr3R 14608546 14608563 4 92 2.5 1.5 2.0 1.3 109 chr3R 14608454 intergenic stumps + chr3R 14608508 intergenic stumps + chr3R 14608563 intergenic stumps + chr3R_4_14605001 chr3R_14605001 RAL-83 1181 chr3R 14662320 14662334 chr3R 14662401 14662415 6 81 2.5 6.5 4.5 1.1 95 chr3R 14662320 intron Rad17 - chr3R 14662368 intron Rad17 - chr3R 14662415 exon Rad17 - chr3R_6_14660001 chr3R_14660001 RAL-83 1182 chr3R 14704384 14704417 chr3R 14704461 14704494 13 73 3.0 3.5 3.2 3.1 110 chr3R 14704384 intron kibra - chr3R 14704439 intron kibra - chr3R 14704494 intron kibra - chr3R_13_14700001 chr3R_14700001 RAL-83 1183 chr3R 15088098 15088104 chr3R 15088193 15088201 5 97 3.5 2.5 3.0 1.2 103 chr3R 15088098 intron CG6966 - chr3R 15088150 intron CG6966 - chr3R 15088201 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-83 1184 chr3R 15132061 15132085 chr3R 15135121 15135145 Juan 14 3059 6.5 10.0 8.2 1.5 3084 chr3R 15132061 intergenic CG42788 - chr3R 15133603 intergenic not near genes chr3R 15135145 3` UTR CG6912 - chr3R_14_15130001 chr3R_15130001 RAL-83 1185 chr3R 15162542 15162557 chr3R 15167310 15167314 F-element 4 4765 2.0 0.5 1.2 1.8 4772 chr3R 15162542 intron Gyc88E + chr3R 15164928 intron Gyc88E + chr3R 15167314 intron Gyc88E + chr3R_4_15160001 chr3R_15160001 RAL-83 1186 chr3R 15499438 15499459 chr3R 15499531 15499552 13 92 1.5 6.5 4.0 2.6 114 chr3R 15499438 intergenic not near genes chr3R 15499495 intergenic not near genes chr3R 15499552 intergenic not near genes chr3R_13_15495001 chr3R_15495001 RAL-83 1187 chr3R 15601165 15601194 chr3R 15608684 15608716 412 6 7522 6.5 5.0 5.8 0.9 7551 chr3R 15601165 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608716 intergenic not near genes chr3R_6_15600001 chr3R_15600001 RAL-83 1188 chr3R 15618742 15618759 chr3R 15626216 15626233 blood 4 7474 1.0 4.5 2.8 1.1 7491 chr3R 15618742 intergenic not near genes chr3R 15622488 intergenic not near genes chr3R 15626233 intergenic not near genes chr3R_4_15620001 chr3R_15620001 RAL-83 1189 chr3R 15646792 15646800 chr3R 15646875 15646883 4 82 1.5 3.5 2.5 1.1 91 chr3R 15646792 intergenic not near genes chr3R 15646838 intergenic not near genes chr3R 15646883 intergenic not near genes chr3R_4_15645001 chr3R_15645001 RAL-83 1190 chr3R 15691180 15691331 chr3R 15691285 15691418 5 101 0.0 0.0 0.0 5.0 238 chr3R 15691180 intergenic not near genes chr3R 15691299 intergenic not near genes chr3R 15691418 intergenic not near genes chr3R_5_15690001 chr3R_15690001 RAL-83 1191 chr3R 15892650 15892687 chr3R 15892731 15892768 14 79 3.0 1.0 2.0 4.7 118 chr3R 15892650 intron CG14877 - chr3R 15892709 intron CG14877 - chr3R 15892768 intron CG14877 - chr3R_14_15890001 chr3R_15890001 RAL-83 1192 chr3R 16023863 16023890 chr3R 16023940 16023967 9 75 0.0 1.5 0.8 5.0 104 chr3R 16023863 intergenic not near genes chr3R 16023915 intergenic not near genes chr3R 16023967 intergenic not near genes chr3R_9_16020001 chr3R_16020001 RAL-83 1193 chr3R 16073439 16073467 chr3R 16073543 16073551 8 101 2.0 0.0 1.0 4.0 112 chr3R 16073439 intron Mhcl - chr3R 16073495 intron Mhcl - chr3R 16073551 intron Mhcl - chr3R_8_16070001 chr3R_16070001 RAL-83 1194 chr3R 16664363 16664394 chr3R 16664451 16664482 15 86 2.5 4.0 3.2 3.6 119 chr3R 16664363 intron Ubx - chr3R 16664422 intron Ubx - chr3R 16664482 intron Ubx - chr3R_15_16660001 chr3R_16660001 RAL-83 1195 chr3R 16731940 16731947 chr3R 16732019 16732027 4 80 0.5 3.5 2.0 1.3 87 chr3R 16731940 intron Ubx - chr3R 16731984 intron Ubx - chr3R 16732027 intron Ubx - chr3R_4_16730001 chr3R_16730001 RAL-83 1196 chr3R 16756319 16756333 chr3R 16762510 16762523 diver 6 6190 6.5 1.0 3.8 1.2 6204 chr3R 16756319 intron bxd - chr3R 16759421 intron bxd - chr3R 16762523 intron bxd - chr3R_6_16755001 chr3R_16755001 RAL-83 1197 chr3R 16756335 16756353 chr3R 16762509 16762544 diver 7 6187 3.5 0.5 2.0 2.3 6209 chr3R 16756335 intron bxd - chr3R 16759440 intron bxd - chr3R 16762544 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-83 1198 chr3R 16836962 16836987 chr3R 16837291 16837316 5 329 1.0 1.5 1.2 2.3 354 chr3R 16836962 intron iab-8 - chr3R 16837139 intron iab-8 - chr3R 16837316 intron iab-8 - chr3R_5_16835001 chr3R_16835001 RAL-83 1199 chr3R 17194411 17194432 chr3R 17194486 17194506 9 76 1.5 4.5 3.0 2.2 95 chr3R 17194411 intron Mur89F - chr3R 17194458 intron Mur89F - chr3R 17194506 intron Mur89F - chr3R_9_17190001 chr3R_17190001 RAL-83 1200 chr3R 17232894 17232914 chr3R 17232987 17233012 5 97 1.5 1.5 1.5 2.0 118 chr3R 17232894 exon beat-IIb - chr3R 17232953 intron beat-IIb - chr3R 17233012 intron beat-IIb - chr3R_5_17230001 chr3R_17230001 RAL-83 1201 chr3R 17273970 17273994 chr3R 17274077 17274100 6 107 1.5 2.0 1.8 2.1 130 chr3R 17273970 intergenic not near genes chr3R 17274035 intergenic not near genes chr3R 17274100 intergenic not near genes chr3R_6_17270001 chr3R_17270001 RAL-83 1202 chr3R 17294671 17294701 chr3R 17295089 17295129 BS 6 426 1.5 3.5 2.5 1.7 458 chr3R 17294671 intergenic not near genes chr3R 17294900 intergenic not near genes chr3R 17295129 intergenic not near genes chr3R_6_17290001 chr3R_17290001 RAL-83 1203 chr3R 17346695 17346716 chr3R 17348257 17348276 F-element 4 1562 3.0 3.5 3.2 1.0 1581 chr3R 17346695 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348276 intron beat-IIa - chr3R_4_17345001 chr3R_17345001 RAL-83 1204 chr3R 17371404 17371432 chr3R 17371480 17371509 5 77 0.0 2.5 1.2 2.3 105 chr3R 17371404 3` UTR CR44256 - chr3R 17371456 3` UTR CR44256 - chr3R 17371509 3` UTR CR44256 - chr3R_5_17370001 chr3R_17370001 RAL-83 1205 chr3R 17389054 17389054 chr3R 21907534 21907535 5 4518480 11.5 22.5 17.0 0.3 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_5_19645001 chr3R_19645001 RAL-83 1206 chr3R 17458236 17458255 chr3R 17458337 17458356 6 101 0.0 1.5 0.8 3.3 120 chr3R 17458236 intergenic not near genes chr3R 17458296 intergenic not near genes chr3R 17458356 intergenic not near genes chr3R_6_17455001 chr3R_17455001 RAL-83 1207 chr3R 17591294 17591322 chr3R 17591730 17591744 F-element 7 430 6.0 4.5 5.2 1.1 450 chr3R 17591294 intergenic not near genes chr3R 17591519 intergenic not near genes chr3R 17591744 intergenic not near genes chr3R_7_17590001 chr3R_17590001 RAL-83 1208 chr3R 17638316 17638348 chr3R 17638801 17638834 roo 8 486 0.0 1.5 0.8 4.4 518 chr3R 17638316 intron CG43175 + chr3R 17638575 intron CG43175 + chr3R 17638834 intron,intron CG43175 +,CR45222 + chr3R_8_17635001 chr3R_17635001 RAL-83 1209 chr3R 17748362 17748374 chr3R 17748511 17748523 4 148 6.0 4.0 5.0 0.7 161 chr3R 17748362 intergenic not near genes chr3R 17748442 intergenic not near genes chr3R 17748523 intergenic not near genes chr3R_4_17745001 chr3R_17745001 RAL-83 1210 chr3R 17881891 17881901 chr3R 17881984 17881994 6 93 2.5 0.0 1.2 2.7 103 chr3R 17881891 exon Rim - chr3R 17881942 intron Rim - chr3R 17881994 intron Rim - chr3R_6_17880001 chr3R_17880001 RAL-83 1211 chr3R 17925874 17925888 chr3R 17927320 17927354 hobo 7 1459 5.5 6.0 5.8 1.0 1480 chr3R 17925874 intron cpo + chr3R 17926614 intron cpo + chr3R 17927354 intron cpo + chr3R_7_17925001 chr3R_17925001 RAL-83 1212 chr3R 17983213 17983246 chr3R 17983288 17983322 6 75 4.0 1.0 2.5 1.7 109 chr3R 17983213 intron cpo + chr3R 17983268 intron cpo + chr3R 17983322 intron cpo + chr3R_6_17980001 chr3R_17980001 RAL-83 1213 chr3R 18041753 18041773 chr3R 18041830 18041850 9 77 0.0 0.0 0.0 9.0 97 chr3R 18041753 intergenic not near genes chr3R 18041802 intergenic not near genes chr3R 18041850 intergenic not near genes chr3R_9_18040001 chr3R_18040001 RAL-83 1214 chr3R 18064733 18064744 chr3R 18064813 18064822 8 80 2.5 2.5 2.5 2.3 89 chr3R 18064733 intergenic not near genes chr3R 18064778 intergenic not near genes chr3R 18064822 intergenic not near genes chr3R_8_18060001 chr3R_18060001 RAL-83 1215 chr3R 18064750 18064755 chr3R 18064810 18064835 4 74 1.5 2.5 2.0 1.3 85 chr3R 18064750 intergenic not near genes chr3R 18064792 intergenic not near genes chr3R 18064835 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-83 1216 chr3R 18322804 18322831 chr3R 18323441 18323468 8 640 28.0 25.5 26.8 0.3 664 chr3R 18322804 intron CG31235 - chr3R 18323136 intron CG31235 - chr3R 18323468 intron CG31235 - chr3R_8_18320001 chr3R_18320001 RAL-83 1217 chr3R 18352573 18352599 chr3R 18352666 18352692 8 93 3.5 1.0 2.2 2.5 119 chr3R 18352573 intron CG15803 - chr3R 18352632 intron CG15803 - chr3R 18352692 intron CG15803 - chr3R_8_18350001 chr3R_18350001 RAL-83 1218 chr3R 18394484 18394497 chr3R 18394561 18394572 8 77 3.0 5.5 4.2 1.5 88 chr3R 18394484 intron Vha100-2 - chr3R 18394528 intron Vha100-2 - chr3R 18394572 intron Vha100-2 - chr3R_8_18390001 chr3R_18390001 RAL-83 1219 chr3R 18501592 18501614 chr3R 18501673 18501695 5 81 5.0 1.5 3.2 1.2 103 chr3R 18501592 intron fru - chr3R 18501644 intron fru - chr3R 18501695 intron fru - chr3R_5_18500001 chr3R_18500001 RAL-83 1220 chr3R 18575589 18575602 chr3R 18575657 18575686 6 77 3.5 2.5 3.0 1.5 97 chr3R 18575589 intron,intron CG7694 +,fray + chr3R 18575638 intron,intron CG7694 +,fray + chr3R 18575686 intron,intron CG7694 +,fray + chr3R_6_18575001 chr3R_18575001 RAL-83 1221 chr3R 18730026 18730038 chr3R 18730101 18730111 6 73 0.5 2.5 1.5 2.4 85 chr3R 18730026 intron Cha + chr3R 18730068 intron Cha + chr3R 18730111 exon Cha + chr3R_6_18730001 chr3R_18730001 RAL-83 1222 chr3R 18766777 18766807 chr3R 18766855 18766885 14 77 1.5 2.0 1.8 5.0 108 chr3R 18766777 intron CG7720 - chr3R 18766831 intron CG7720 - chr3R 18766885 intron CG7720 - chr3R_14_18765001 chr3R_18765001 RAL-83 1223 chr3R 18781709 18781726 chr3R 18781773 18781777 5 68 2.0 4.5 3.2 1.2 68 chr3R 18781709 intron CG7720 - chr3R 18781743 intron CG7720 - chr3R 18781777 intron CG7720 - chr3R_5_18780001 chr3R_18780001 RAL-83 1224 chr3R 18812076 18812109 chr3R 18812152 18812187 11 77 4.0 3.0 3.5 2.4 111 chr3R 18812076 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812187 intron CG18208 - chr3R_11_18810001 chr3R_18810001 RAL-83 1225 chr3R 18863175 18863183 chr3R 18863260 18863268 4 86 0.0 3.5 1.8 1.4 93 chr3R 18863175 intergenic not near genes chr3R 18863222 intergenic not near genes chr3R 18863268 intergenic not near genes chr3R_4_18860001 chr3R_18860001 RAL-83 1226 chr3R 19013019 19013050 chr3R 19013103 19013133 7 84 2.5 2.0 2.2 2.2 114 chr3R 19013019 intron gukh + chr3R 19013076 intron gukh + chr3R 19013133 intron gukh + chr3R_7_19010001 chr3R_19010001 RAL-83 1227 chr3R 19106820 19106841 chr3R 19106910 19106918 7 88 7.0 0.0 3.5 1.6 98 chr3R 19106820 intron CG6040 + chr3R 19106869 intron CG6040 + chr3R 19106918 intron CG6040 + chr3R_7_19105001 chr3R_19105001 RAL-83 1228 chr3R 19117069 19117079 chr3R 19117213 19117215 5 139 8.5 0.0 4.2 1.0 146 chr3R 19117069 intron CG6040 + chr3R 19117142 intron CG6040 + chr3R 19117215 intron CG6040 + chr3R_5_19115001 chr3R_19115001 RAL-83 1229 chr3R 19140267 19140298 chr3R 19140712 19140746 16 446 2.5 2.5 2.5 4.6 479 chr3R 19140267 3` UTR Ppcs - chr3R 19140506 3` UTR Ppcs - chr3R 19140746 3` UTR Ppcs - chr3R_16_19140001 chr3R_19140001 RAL-83 1230 chr3R 19271421 19271440 chr3R 19271506 19271513 7 79 3.5 4.5 4.0 1.4 92 chr3R 19271421 intergenic not near genes chr3R 19271467 intergenic not near genes chr3R 19271513 intergenic not near genes chr3R_7_19270001 chr3R_19270001 RAL-83 1231 chr3R 19340397 19340424 chr3R 19340472 19340501 5 75 3.0 2.0 2.5 1.4 104 chr3R 19340397 intergenic not near genes chr3R 19340449 intergenic not near genes chr3R 19340501 intergenic not near genes chr3R_5_19340001 chr3R_19340001 RAL-83 1232 chr3R 19533375 19533400 chr3R 19533452 19533475 10 76 3.5 6.0 4.8 1.7 100 chr3R 19533375 intron Dys + chr3R 19533425 intron Dys + chr3R 19533475 intron Dys + chr3R_10_19530001 chr3R_19530001 RAL-83 1233 chr3R 19702333 19702344 chr3R 19702415 19702426 4 82 4.0 3.5 3.8 0.8 93 chr3R 19702333 intergenic not near genes chr3R 19702380 intergenic not near genes chr3R 19702426 intergenic not near genes chr3R_4_19700001 chr3R_19700001 RAL-83 1234 chr3R 19716214 19716232 chr3R 19716291 19716309 6 77 0.0 1.5 0.8 3.3 95 chr3R 19716214 intergenic CG34286 - chr3R 19716262 intergenic CG34286 - chr3R 19716309 intergenic CG34286 - chr3R_6_19715001 chr3R_19715001 RAL-83 1235 chr3R 19793905 19793918 chr3R 19793990 19794010 6 88 5.0 1.5 3.2 1.4 105 chr3R 19793905 intergenic bnl - chr3R 19793958 intergenic bnl - chr3R 19794010 intergenic bnl - chr3R_6_19790001 chr3R_19790001 RAL-83 1236 chr3R 19989843 19989867 chr3R 19989923 19989947 10 77 8.5 2.5 5.5 1.5 104 chr3R 19989843 intron Hs6st - chr3R 19989895 intron Hs6st - chr3R 19989947 intron Hs6st - chr3R_10_19985001 chr3R_19985001 RAL-83 1237 chr3R 20059467 20059499 chr3R 20059547 20059579 15 80 0.5 4.0 2.2 4.7 112 chr3R 20059467 intron CG4390 - chr3R 20059523 intron CG4390 - chr3R 20059579 exon CG4390 - chr3R_15_20055001 chr3R_20055001 RAL-83 1238 chr3R 20066125 20066136 chr3R 20066315 20066326 4 190 6.0 3.0 4.5 0.7 201 chr3R 20066125 intergenic not near genes chr3R 20066226 intergenic not near genes chr3R 20066326 intergenic not near genes chr3R_4_20065001 chr3R_20065001 RAL-83 1239 chr3R 20066554 20066581 chr3R 20066790 20066815 5 236 0.5 1.0 0.8 2.8 261 chr3R 20066554 intergenic not near genes chr3R 20066684 intergenic not near genes chr3R 20066815 intergenic not near genes chr3R_5_20065001 chr3R_20065001 RAL-83 1240 chr3R 20109554 20109571 chr3R 20114759 20114777 copia 4 5206 1.0 3.0 2.0 1.3 5223 chr3R 20109554 intergenic not near genes chr3R 20112166 intergenic not near genes chr3R 20114777 intergenic CG10887 + chr3R_4_20110001 chr3R_20110001 RAL-83 1241 chr3R 20155610 20155644 chr3R 20155687 20155721 11 76 4.0 2.5 3.2 2.6 111 chr3R 20155610 intergenic not near genes chr3R 20155666 intergenic not near genes chr3R 20155721 intergenic not near genes chr3R_11_20155001 chr3R_20155001 RAL-83 1242 chr3R 20156705 20156723 chr3R 20165862 20165893 roo 6 9167 0.5 3.0 1.8 2.1 9188 chr3R 20156705 intergenic not near genes chr3R 20161299 intergenic not near genes chr3R 20165893 intergenic not near genes chr3R_6_20160001 chr3R_20160001 RAL-83 1243 chr3R 20256845 20256856 chr3R 20256923 20256934 4 78 0.0 0.5 0.2 3.3 89 chr3R 20256845 intron cic + chr3R 20256890 intron cic + chr3R 20256934 intron cic + chr3R_4_20255001 chr3R_20255001 RAL-83 1244 chr3R 20266524 20266538 chr3R 20272995 20273009 Burdock 6 6471 3.0 2.0 2.5 1.7 6485 chr3R 20266524 intron cic + chr3R 20269766 intron cic + chr3R 20273009 intron cic + chr3R_6_20265001 chr3R_20265001 RAL-83 1245 chr3R 20391744 20391774 chr3R 20391839 20391855 5 93 3.5 3.5 3.5 1.1 111 chr3R 20391744 intron Gfrl - chr3R 20391800 intron Gfrl - chr3R 20391855 intron Gfrl - chr3R_5_20390001 chr3R_20390001 RAL-83 1246 chr3R 20404976 20405005 chr3R 20405646 20405659 8 666 1.0 6.0 3.5 1.8 683 chr3R 20404976 intron Gfrl - chr3R 20405318 intron Gfrl - chr3R 20405659 intron Gfrl - chr3R_8_20405001 chr3R_20405001 RAL-83 1247 chr3R 20689434 20689450 chr3R 20689699 20689716 4 265 0.5 2.5 1.5 1.6 282 chr3R 20689434 3` UTR Oamb - chr3R 20689575 3` UTR Oamb - chr3R 20689716 3` UTR Oamb - chr3R_4_20685001 chr3R_20685001 RAL-83 1248 chr3R 20733763 20733797 chr3R 20733854 20733862 16 87 7.0 5.0 6.0 2.3 99 chr3R 20733763 intergenic not near genes chr3R 20733812 intergenic not near genes chr3R 20733862 intergenic not near genes chr3R_16_20730001 chr3R_20730001 RAL-83 1249 chr3R 20870251 20870284 chr3R 20870335 20870369 13 81 4.0 2.5 3.2 3.1 118 chr3R 20870251 intergenic not near genes chr3R 20870310 intergenic not near genes chr3R 20870369 intergenic not near genes chr3R_13_20870001 chr3R_20870001 RAL-83 1250 chr3R 20878502 20878525 chr3R 20878586 20878608 5 84 1.0 0.5 0.8 2.8 106 chr3R 20878502 3` UTR CR44048 - chr3R 20878555 3` UTR CR44048 - chr3R 20878608 3` UTR CR44048 - chr3R_5_20875001 chr3R_20875001 RAL-83 1251 chr3R 20901655 20901682 chr3R 20901758 20901785 5 103 4.0 4.5 4.2 1.0 130 chr3R 20901655 intergenic CG5621 + chr3R 20901720 intergenic CG5621 + chr3R 20901785 intergenic CG5621 + chr3R_5_20900001 chr3R_20900001 RAL-83 1252 chr3R 20938904 20938940 chr3R 20938991 20939027 17 82 4.5 3.5 4.0 3.4 123 chr3R 20938904 intron CG31191 - chr3R 20938966 intron CG31191 - chr3R 20939027 intron CG31191 - chr3R_17_20935001 chr3R_20935001 RAL-83 1253 chr3R 20942810 20942838 chr3R 20942886 20942913 10 75 2.5 5.0 3.8 2.1 103 chr3R 20942810 intron CG31191 - chr3R 20942862 intron CG31191 - chr3R 20942913 intron CG31191 - chr3R_10_20940001 chr3R_20940001 RAL-83 1254 chr3R 21041099 21041131 chr3R 21041252 21041284 8 152 3.0 1.0 2.0 2.7 185 chr3R 21041099 exon Dhc93AB - chr3R 21041192 intron Dhc93AB - chr3R 21041284 intron Dhc93AB - chr3R_8_21040001 chr3R_21040001 RAL-83 1255 chr3R 21108040 21108061 chr3R 21108301 21108322 8 261 1.5 2.5 2.0 2.7 282 chr3R 21108040 intergenic Sec15 -,rtet + chr3R 21108181 intergenic Sec15 -,rtet + chr3R 21108322 intergenic rtet +,Sec15 - chr3R_8_21105001 chr3R_21105001 RAL-83 1256 chr3R 21141680 21141692 chr3R 21150161 21150164 Tirant 5 8477 7.5 5.5 6.5 0.7 8484 chr3R 21141680 intron SNF4Agamma + chr3R 21145922 intron SNF4Agamma + chr3R 21150164 intron SNF4Agamma + chr3R_5_21145001 chr3R_21145001 RAL-83 1257 chr3R 21163246 21163270 chr3R 21163324 21163348 5 78 3.5 0.5 2.0 1.7 102 chr3R 21163246 intron SNF4Agamma + chr3R 21163297 intron SNF4Agamma + chr3R 21163348 intron SNF4Agamma + chr3R_5_21160001 chr3R_21160001 RAL-83 1258 chr3R 21214760 21214765 chr3R 21214916 21214937 5 169 1.0 1.5 1.2 2.3 177 chr3R 21214760 intergenic CG5862 + chr3R 21214848 intergenic CG5862 + chr3R 21214937 intergenic CG5862 + chr3R_5_21210001 chr3R_21210001 RAL-83 1259 chr3R 21225979 21225995 chr3R 21226047 21226067 8 75 3.0 1.5 2.2 2.5 88 chr3R 21225979 exon Nelf-A + chr3R 21226023 exon Nelf-A + chr3R 21226067 exon Nelf-A + chr3R_8_21225001 chr3R_21225001 RAL-83 1260 chr3R 21240451 21240475 chr3R 21240543 21240567 8 91 3.5 3.0 3.2 1.9 116 chr3R 21240451 intergenic not near genes chr3R 21240509 intergenic not near genes chr3R 21240567 intergenic not near genes chr3R_8_21240001 chr3R_21240001 RAL-83 1261 chr3R 21322976 21322994 chr3R 21323054 21323063 6 77 4.0 0.0 2.0 2.0 87 chr3R 21322976 intron CG16791 - chr3R 21323020 intron CG16791 - chr3R 21323063 intron CG16791 - chr3R_6_21320001 chr3R_21320001 RAL-83 1262 chr3R 21464413 21464421 chr3R 21464498 21464507 4 86 0.5 0.5 0.5 2.7 94 chr3R 21464413 intergenic not near genes chr3R 21464460 intergenic not near genes chr3R 21464507 intergenic not near genes chr3R_4_21460001 chr3R_21460001 RAL-83 1263 chr3R 21472018 21472035 chr3R 21472093 21472116 8 80 4.0 2.0 3.0 2.0 98 chr3R 21472018 intergenic not near genes chr3R 21472067 intergenic not near genes chr3R 21472116 intergenic not near genes chr3R_8_21470001 chr3R_21470001 RAL-83 1264 chr3R 21518260 21518270 chr3R 21518344 21518353 5 83 0.0 3.0 1.5 2.0 93 chr3R 21518260 intergenic not near genes chr3R 21518306 intergenic not near genes chr3R 21518353 intergenic not near genes chr3R_5_21515001 chr3R_21515001 RAL-83 1265 chr3R 21600254 21600275 chr3R 21600332 21600353 4 78 0.0 1.5 0.8 2.2 99 chr3R 21600254 intron InR - chr3R 21600304 intron InR - chr3R 21600353 intron InR - chr3R_4_21600001 chr3R_21600001 RAL-83 1266 chr3R 21609004 21609036 chr3R 21611638 21611651 NOF 10 2628 2.5 4.0 3.2 2.4 2647 chr3R 21609004 intron InR - chr3R 21610328 intron InR - chr3R 21611651 intron InR - chr3R_10_21610001 chr3R_21610001 RAL-83 1267 chr3R 21651241 21651263 chr3R 21651319 21651341 4 78 1.0 1.5 1.2 1.8 100 chr3R 21651241 intron E2f - chr3R 21651291 intron E2f - chr3R 21651341 intron E2f - chr3R_4_21650001 chr3R_21650001 RAL-83 1268 chr3R 21761128 21761155 chr3R 21768509 21768528 mdg1 6 7386 2.0 2.0 2.0 2.0 7400 chr3R 21761128 exon CG42335 + chr3R 21764828 intron CG42335 + chr3R 21768528 exon CG42335 + chr3R_6_21760001 chr3R_21760001 RAL-83 1269 chr3R 21820458 21820494 chr3R 21820566 21820589 11 102 3.0 3.5 3.2 2.6 131 chr3R 21820458 intron CASK - chr3R 21820524 intron CASK - chr3R 21820589 intron CASK - chr3R_11_21820001 chr3R_21820001 RAL-83 1270 chr3R 21337429 21337429 chr3R 21907534 21907534 7 570105 10.5 22.5 16.5 0.4 570105 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_7_21620001 chr3R_21620001 RAL-83 1271 chr3R 21907534 21907534 chr3R 28831801 28831802 9 6924268 26.0 29.0 27.5 0.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_9_25365001 chr3R_25365001 RAL-83 1272 chr3R 21907535 21907535 chr3R 28831801 28831803 13 6924267 26.0 29.0 27.5 0.5 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_13_25365001 chr3R_25365001 RAL-83 1273 chr3R 21907536 21907536 chr3R 28831801 28831802 10 6924266 26.0 29.0 27.5 0.4 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_10_25365001 chr3R_25365001 RAL-83 1274 chr3R 22040144 22040145 chr3R 22040319 22040322 4 176 8.0 6.0 7.0 0.5 178 chr3R 22040144 intergenic not near genes chr3R 22040233 intergenic not near genes chr3R 22040322 intergenic not near genes chr3R_4_22040001 chr3R_22040001 RAL-83 1275 chr3R 22040147 22040160 chr3R 22040317 22040337 5 176 5.5 6.0 5.8 0.7 190 chr3R 22040147 intergenic not near genes chr3R 22040242 intergenic not near genes chr3R 22040337 intergenic not near genes chr3R_5_22040001 chr3R_22040001 RAL-83 1276 chr3R 22055562 22055589 chr3R 22055750 22055755 11 187 3.5 2.0 2.8 2.9 193 chr3R 22055562 intron how + chr3R 22055658 intron how + chr3R 22055755 intron how + chr3R_11_22055001 chr3R_22055001 RAL-83 1277 chr3R 22234686 22234711 chr3R 22236004 22236014 pogo 5 1315 1.0 3.5 2.2 1.6 1328 chr3R 22234686 intron SKIP + chr3R 22235350 intron SKIP + chr3R 22236014 intron SKIP + chr3R_5_22235001 chr3R_22235001 RAL-83 1278 chr3R 22330601 22330630 chr3R 22332321 22332338 11 1710 17.0 23.0 20.0 0.5 1737 chr3R 22330601 intergenic CG7080 +,CG33721 + chr3R 22331470 exon CG33721 + chr3R 22332338 exon CG13862 + chr3R_11_22330001 chr3R_22330001 RAL-83 1279 chr3R 22390899 22390932 chr3R 22391000 22391033 9 99 1.5 2.5 2.0 3.0 134 chr3R 22390899 intron CG7059 + chr3R 22390966 intron CG7059 + chr3R 22391033 intron CG7059 + chr3R_9_22390001 chr3R_22390001 RAL-83 1280 chr3R 22437801 22437811 chr3R 22437890 22437901 4 90 2.0 3.5 2.8 1.1 100 chr3R 22437801 intergenic not near genes chr3R 22437851 intergenic not near genes chr3R 22437901 intergenic not near genes chr3R_4_22435001 chr3R_22435001 RAL-83 1281 chr3R 22450542 22450578 chr3R 22453181 22453217 NOF 11 2638 3.5 4.0 3.8 2.3 2675 chr3R 22450542 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453217 intron CG34376 + chr3R_11_22450001 chr3R_22450001 RAL-83 1282 chr3R 22538444 22538473 chr3R 22538529 22538558 12 85 2.0 2.0 2.0 4.0 114 chr3R 22538444 intron CG5326 - chr3R 22538501 intron CG5326 - chr3R 22538558 intron CG5326 - chr3R_12_22535001 chr3R_22535001 RAL-83 1283 chr3R 22582468 22582490 chr3R 22583453 22583477 7 984 14.5 9.0 11.8 0.5 1009 chr3R 22582468 exon Dph5 - chr3R 22582972 intron Dph5 - chr3R 22583477 exon CG33107 - chr3R_7_22580001 chr3R_22580001 RAL-83 1284 chr3R 22582430 22582468 chr3R 22583410 22583448 9 981 19.0 9.0 14.0 0.6 1018 chr3R 22582430 exon Dph5 - chr3R 22582939 intron Dph5 - chr3R 22583448 3` UTR CG33107 - chr3R_9_22580001 chr3R_22580001 RAL-83 1285 chr3R 22684203 22684238 chr3R 22684279 22684313 5 74 2.5 1.5 2.0 1.7 110 chr3R 22684203 intergenic not near genes chr3R 22684258 intergenic not near genes chr3R 22684313 intergenic not near genes chr3R_5_22680001 chr3R_22680001 RAL-83 1286 chr3R 22769092 22769123 chr3R 22769169 22769199 6 70 3.0 1.0 2.0 2.0 107 chr3R 22769092 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769146 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769199 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_6_22765001 chr3R_22765001 RAL-83 1287 chr3R 22797757 22797937 chr3R 22797843 22798033 22 88 0.5 0.5 0.5 14.7 276 chr3R 22797757 intergenic not near genes chr3R 22797895 intergenic not near genes chr3R 22798033 intergenic not near genes chr3R_22_22795001 chr3R_22795001 RAL-83 1288 chr3R 22803445 22803459 chr3R 22803631 22803650 8 189 5.5 3.5 4.5 1.5 205 chr3R 22803445 intergenic not near genes chr3R 22803548 intergenic not near genes chr3R 22803650 intergenic not near genes chr3R_8_22800001 chr3R_22800001 RAL-83 1289 chr3R 22867313 22867327 chr3R 22867390 22867404 7 76 7.5 6.5 7.0 0.9 91 chr3R 22867313 intergenic not near genes chr3R 22867358 intergenic not near genes chr3R 22867404 intergenic not near genes chr3R_7_22865001 chr3R_22865001 RAL-83 1290 chr3R 22889013 22889048 chr3R 22889090 22889125 10 76 1.5 4.0 2.8 2.6 112 chr3R 22889013 intergenic not near genes chr3R 22889069 intergenic not near genes chr3R 22889125 intergenic not near genes chr3R_10_22885001 chr3R_22885001 RAL-83 1291 chr3R 22934610 22934637 chr3R 22934691 22934717 20 79 4.0 4.5 4.2 3.8 107 chr3R 22934610 intron klg + chr3R 22934664 intron klg + chr3R 22934717 intron klg + chr3R_20_22930001 chr3R_22930001 RAL-83 1292 chr3R 22949513 22949519 chr3R 22950722 22950728 4 1210 5.5 4.0 4.8 0.7 1215 chr3R 22949513 intron klg + chr3R 22950120 intron klg + chr3R 22950728 intron klg + chr3R_4_22950001 chr3R_22950001 RAL-83 1293 chr3R 22977096 22977102 chr3R 22977177 22977195 4 86 5.0 4.5 4.8 0.7 99 chr3R 22977096 intergenic CG17244 + chr3R 22977146 intergenic CG17244 + chr3R 22977195 intergenic CG17244 + chr3R_4_22975001 chr3R_22975001 RAL-83 1294 chr3R 22998593 22998609 chr3R 22998669 22998681 8 73 4.0 3.5 3.8 1.7 88 chr3R 22998593 intergenic Nha2 - chr3R 22998637 intergenic Nha2 - chr3R 22998681 intergenic Nha2 - chr3R_8_22995001 chr3R_22995001 RAL-83 1295 chr3R 22998610 22998616 chr3R 22998666 22998692 5 68 3.0 3.0 3.0 1.2 82 chr3R 22998610 intergenic Nha2 - chr3R 22998651 intergenic Nha2 - chr3R 22998692 intergenic Nha2 - chr3R_5_22995001 chr3R_22995001 RAL-83 1296 chr3R 23073653 23073685 chr3R 23073742 23073765 10 84 2.0 2.5 2.2 3.1 112 chr3R 23073653 intron CG13830 - chr3R 23073709 intron CG13830 - chr3R 23073765 intron CG13830 - chr3R_10_23070001 chr3R_23070001 RAL-83 1297 chr3R 23090404 23090436 chr3R 23090487 23090519 10 82 3.0 6.5 4.8 1.7 115 chr3R 23090404 intron CG13830 - chr3R 23090462 intron CG13830 - chr3R 23090519 intron CG13830 - chr3R_10_23090001 chr3R_23090001 RAL-83 1298 chr3R 23091261 23091280 chr3R 23091346 23091365 6 85 2.5 1.0 1.8 2.1 104 chr3R 23091261 intron CG13830 - chr3R 23091313 intron CG13830 - chr3R 23091365 intron CG13830 - chr3R_6_23090001 chr3R_23090001 RAL-83 1299 chr3R 23245991 23246022 chr3R 23246073 23246073 9 73 2.5 1.0 1.8 3.2 82 chr3R 23245991 intron CG4467 - chr3R 23246032 intron CG4467 - chr3R 23246073 intron CG4467 - chr3R_9_23245001 chr3R_23245001 RAL-83 1300 chr3R 23291253 23291268 chr3R 23291338 23291353 7 85 7.5 4.0 5.8 1.0 100 chr3R 23291253 3` UTR pnt - chr3R 23291303 3` UTR pnt - chr3R 23291353 3` UTR pnt - chr3R_7_23290001 chr3R_23290001 RAL-83 1301 chr3R 23291271 23291284 chr3R 23291332 23291369 6 82 3.5 3.5 3.5 1.3 98 chr3R 23291271 3` UTR pnt - chr3R 23291320 3` UTR pnt - chr3R 23291369 exon pnt - chr3R_6_23290001 chr3R_23290001 RAL-83 1302 chr3R 23328724 23328727 chr3R 23328794 23328796 6 75 0.5 3.0 1.8 2.1 72 chr3R 23328724 intron pnt - chr3R 23328760 intron pnt - chr3R 23328796 intron pnt - chr3R_6_23325001 chr3R_23325001 RAL-83 1303 chr3R 23335437 23335465 chr3R 23335515 23335543 5 78 6.0 3.5 4.8 0.9 106 chr3R 23335437 intron pnt - chr3R 23335490 intron pnt - chr3R 23335543 intron pnt - chr3R_5_23335001 chr3R_23335001 RAL-83 1304 chr3R 23363684 23363700 chr3R 23363768 23363786 5 86 2.0 3.5 2.8 1.3 102 chr3R 23363684 intergenic CG4408 - chr3R 23363735 intergenic CG4408 - chr3R 23363786 intergenic CG4408 - chr3R_5_23360001 chr3R_23360001 RAL-83 1305 chr3R 23446280 23446311 chr3R 23446357 23446389 16 76 6.0 3.5 4.8 2.8 109 chr3R 23446280 intron CG4374 - chr3R 23446334 intron CG4374 - chr3R 23446389 intron CG4374 - chr3R_16_23445001 chr3R_23445001 RAL-83 1306 chr3R 23536964 23536981 chr3R 23537144 23537163 5 182 2.0 9.0 5.5 0.8 199 chr3R 23536964 intergenic CG10168 -,CG16732 - chr3R 23537064 exon CG10168 - chr3R 23537163 exon CG10168 - chr3R_5_23535001 chr3R_23535001 RAL-83 1307 chr3R 23548077 23548098 chr3R 23548373 23548403 8 301 3.0 6.0 4.5 1.5 326 chr3R 23548077 intergenic not near genes chr3R 23548240 intergenic not near genes chr3R 23548403 intergenic not near genes chr3R_8_23545001 chr3R_23545001 RAL-83 1308 chr3R 23558398 23558427 chr3R 23560179 23560208 Bari1 6 1781 3.0 0.5 1.8 2.1 1810 chr3R 23558398 intron beat-IV + chr3R 23559303 intron beat-IV + chr3R 23560208 intron beat-IV + chr3R_6_23555001 chr3R_23555001 RAL-83 1309 chr3R 23574406 23574430 chr3R 23574945 23574948 5 533 1.0 2.5 1.8 1.8 542 chr3R 23574406 exon beat-IV + chr3R 23574677 intron beat-IV + chr3R 23574948 intron beat-IV + chr3R_5_23570001 chr3R_23570001 RAL-83 1310 chr3R 23582809 23582827 chr3R 23582893 23582902 8 83 5.0 3.0 4.0 1.6 93 chr3R 23582809 intergenic not near genes chr3R 23582856 intergenic not near genes chr3R 23582902 intergenic not near genes chr3R_8_23580001 chr3R_23580001 RAL-83 1311 chr3R 23639937 23639961 chr3R 23640243 23640267 7 306 2.0 4.0 3.0 1.8 330 chr3R 23639937 intron CG31145 - chr3R 23640102 intron CG31145 - chr3R 23640267 intron CG31145 - chr3R_7_23640001 chr3R_23640001 RAL-83 1312 chr3R 23674865 23674883 chr3R 23674964 23674982 6 99 3.0 1.5 2.2 1.9 117 chr3R 23674865 intergenic not near genes chr3R 23674924 intergenic not near genes chr3R 23674982 intergenic not near genes chr3R_6_23670001 chr3R_23670001 RAL-83 1313 chr3R 23684695 23684730 chr3R 23685181 23685184 roo 8 473 4.0 8.0 6.0 1.1 489 chr3R 23684695 exon CG18754 + chr3R 23684940 intron CG18754 + chr3R 23685184 exon CG18754 + chr3R_8_23680001 chr3R_23680001 RAL-83 1314 chr3R 23681245 23681279 chr3R 23686649 23686678 8 5402 24.5 20.5 22.5 0.3 5433 chr3R 23681245 exon eIF-3p66 + chr3R 23683962 3` UTR CG16710 + chr3R 23686678 intron SPE + chr3R_8_23680001 chr3R_23680001 RAL-83 1315 chr3R 23724883 23724917 chr3R 23724967 23725001 8 82 6.5 1.0 3.8 1.7 118 chr3R 23724883 intron CG10365 + chr3R 23724942 intron CG10365 + chr3R 23725001 intron CG10365 + chr3R_8_23720001 chr3R_23720001 RAL-83 1316 chr3R 23835405 23835434 chr3R 23844555 23844560 roo 5 9145 1.5 0.0 0.8 2.8 9155 chr3R 23835405 intron CG34355 + chr3R 23839982 intron CG34355 + chr3R 23844560 intron CG34355 + chr3R_5_23835001 chr3R_23835001 RAL-83 1317 chr3R 23938679 23938700 chr3R 23939108 23939132 5 426 3.5 1.0 2.2 1.6 453 chr3R 23938679 intron Gdh - chr3R 23938906 intron Gdh - chr3R 23939132 intron Gdh - chr3R_5_23935001 chr3R_23935001 RAL-83 1318 chr3R 23939207 23939232 chr3R 23939293 23939318 5 85 4.0 1.5 2.8 1.3 111 chr3R 23939207 intron Gdh - chr3R 23939262 intron Gdh - chr3R 23939318 intron Gdh - chr3R_5_23935001 chr3R_23935001 RAL-83 1319 chr3R 23944910 23944928 chr3R 23944995 23945013 4 83 3.5 4.0 3.8 0.8 103 chr3R 23944910 intron CG12268 - chr3R 23944962 intron CG12268 - chr3R 23945013 intron CG12268 - chr3R_4_23940001 chr3R_23940001 RAL-83 1320 chr3R 23949048 23949075 chr3R 23949119 23949152 5 75 0.5 0.0 0.2 4.2 104 chr3R 23949048 intergenic not near genes chr3R 23949100 intergenic not near genes chr3R 23949152 intergenic not near genes chr3R_5_23945001 chr3R_23945001 RAL-83 1321 chr3R 24076919 24076949 chr3R 24078381 24078395 hobo 7 1459 4.0 5.5 4.8 1.2 1476 chr3R 24076919 intron 4EHP - chr3R 24077657 intron 4EHP - chr3R 24078395 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-83 1322 chr3R 24199737 24199773 chr3R 24199817 24199853 10 74 2.0 3.0 2.5 2.9 116 chr3R 24199737 intron twin - chr3R 24199795 intron twin - chr3R 24199853 intron twin - chr3R_10_24195001 chr3R_24195001 RAL-83 1323 chr3R 24291126 24291142 chr3R 24291200 24291231 4 80 5.0 2.0 3.5 0.9 105 chr3R 24291126 exon CG6364 + chr3R 24291178 intron CG6364 + chr3R 24291231 intron CG6364 + chr3R_4_24290001 chr3R_24290001 RAL-83 1324 chr3R 24441624 24441645 chr3R 24441904 24441927 4 280 2.0 3.0 2.5 1.1 303 chr3R 24441624 intron nAChRalpha1 - chr3R 24441776 intron nAChRalpha1 - chr3R 24441927 intron nAChRalpha1 - chr3R_4_24440001 chr3R_24440001 RAL-83 1325 chr3R 24466025 24466058 chr3R 24466115 24466150 8 88 0.5 2.0 1.2 3.6 125 chr3R 24466025 intergenic not near genes chr3R 24466088 intergenic not near genes chr3R 24466150 intergenic not near genes chr3R_8_24465001 chr3R_24465001 RAL-83 1326 chr3R 24493288 24493304 chr3R 24493517 24493530 BS 4 228 0.0 5.5 2.8 1.1 242 chr3R 24493288 intergenic not near genes chr3R 24493409 intergenic not near genes chr3R 24493530 intergenic not near genes chr3R_4_24490001 chr3R_24490001 RAL-83 1327 chr3R 24495287 24495319 chr3R 24495366 24495376 11 77 1.5 2.5 2.0 3.7 89 chr3R 24495287 intergenic not near genes chr3R 24495332 intergenic not near genes chr3R 24495376 intergenic not near genes chr3R_11_24495001 chr3R_24495001 RAL-83 1328 chr3R 24527812 24527823 chr3R 24527903 24527914 5 91 2.0 3.5 2.8 1.3 102 chr3R 24527812 intergenic CG6607 +,CG13618 + chr3R 24527863 intergenic CG6607 +,CG13618 + chr3R 24527914 intergenic CG6607 +,CG13618 + chr3R_5_24525001 chr3R_24525001 RAL-83 1329 chr3R 24670162 24670193 chr3R 24670246 24670277 5 81 0.0 0.0 0.0 5.0 115 chr3R 24670162 intron slo + chr3R 24670220 intron slo + chr3R 24670277 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-83 1330 chr3R 24671223 24671249 chr3R 24671299 24671302 4 68 0.5 3.5 2.0 1.3 79 chr3R 24671223 intron slo + chr3R 24671262 intron slo + chr3R 24671302 intron slo + chr3R_4_24670001 chr3R_24670001 RAL-83 1331 chr3R 24730108 24730125 chr3R 24732472 24732473 Doc 7 2371 3.0 2.0 2.5 2.0 2365 chr3R 24730108 intron tok + chr3R 24731290 intron tok + chr3R 24732473 intron tok + chr3R_7_24730001 chr3R_24730001 RAL-83 1332 chr3R 24743036 24743061 chr3R 24743121 24743131 5 79 2.5 5.5 4.0 1.0 95 chr3R 24743036 intron tok + chr3R 24743084 intron tok + chr3R 24743131 intron tok + chr3R_5_24740001 chr3R_24740001 RAL-83 1333 chr3R 24790684 24790713 chr3R 24790766 24790795 5 79 4.0 4.5 4.2 1.0 111 chr3R 24790684 intron Ets96B + chr3R 24790740 intron Ets96B + chr3R 24790795 intron Ets96B + chr3R_5_24790001 chr3R_24790001 RAL-83 1334 chr3R 24927133 24927149 chr3R 24931915 24931940 Doc 5 4789 4.0 4.0 4.0 1.0 4807 chr3R 24927133 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931940 intergenic CG11771 + chr3R_5_24925001 chr3R_24925001 RAL-83 1335 chr3R 25027539 25027570 chr3R 25027752 25027783 11 213 4.5 2.0 3.2 2.6 244 chr3R 25027539 intron Hr96 + chr3R 25027661 intron Hr96 + chr3R 25027783 intron Hr96 + chr3R_11_25025001 chr3R_25025001 RAL-83 1336 chr3R 25209596 25209629 chr3R 25209678 25209711 8 80 3.0 5.0 4.0 1.6 115 chr3R 25209596 intron CG13654 + chr3R 25209654 intron CG13654 + chr3R 25209711 intron CG13654 + chr3R_8_25205001 chr3R_25205001 RAL-83 1337 chr3R 25302685 25302709 chr3R 25302928 25302958 7 248 2.0 3.0 2.5 2.0 273 chr3R 25302685 exon CG31370 + chr3R 25302822 exon CG31370 + chr3R 25302958 exon CG31370 + chr3R_7_25300001 chr3R_25300001 RAL-83 1338 chr3R 25543165 25543183 chr3R 25543290 25543311 6 128 2.5 1.0 1.8 2.1 146 chr3R 25543165 intron msi + chr3R 25543238 intron msi + chr3R 25543311 intron msi + chr3R_6_25540001 chr3R_25540001 RAL-83 1339 chr3R 25549915 25549945 chr3R 25550003 25550005 8 84 0.5 0.0 0.2 6.7 90 chr3R 25549915 intron msi + chr3R 25549960 intron msi + chr3R 25550005 intron msi + chr3R_8_25545001 chr3R_25545001 RAL-83 1340 chr3R 25558968 25558979 chr3R 25559142 25559153 4 174 5.0 4.0 4.5 0.7 185 chr3R 25558968 intron msi + chr3R 25559060 intron msi + chr3R 25559153 intron msi + chr3R_4_25555001 chr3R_25555001 RAL-83 1341 chr3R 25588080 25588105 chr3R 25588155 25588165 14 74 3.5 2.5 3.0 3.5 85 chr3R 25588080 intron msi + chr3R 25588122 intron msi + chr3R 25588165 intron msi + chr3R_14_25585001 chr3R_25585001 RAL-83 1342 chr3R 25689129 25689158 chr3R 25689237 25689266 9 108 4.5 7.5 6.0 1.3 137 chr3R 25689129 intergenic not near genes chr3R 25689198 intergenic not near genes chr3R 25689266 intergenic not near genes chr3R_9_25685001 chr3R_25685001 RAL-83 1343 chr3R 25692539 25692566 chr3R 25692657 25692686 12 118 3.0 4.5 3.8 2.5 147 chr3R 25692539 intergenic not near genes chr3R 25692612 intergenic not near genes chr3R 25692686 intergenic not near genes chr3R_12_25690001 chr3R_25690001 RAL-83 1344 chr3R 25780098 25780124 chr3R 25780200 25780226 7 101 2.0 1.0 1.5 2.8 128 chr3R 25780098 intergenic not near genes chr3R 25780162 intergenic not near genes chr3R 25780226 intergenic not near genes chr3R_7_25780001 chr3R_25780001 RAL-83 1345 chr3R 25832699 25832719 chr3R 25841870 25841901 roo 13 9179 6.0 6.0 6.0 1.9 9202 chr3R 25832699 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841901 exon alpha4GT2 + chr3R_13_25835001 chr3R_25835001 RAL-83 1346 chr3R 25843635 25843654 chr3R 25843765 25843784 4 130 2.0 3.0 2.5 1.1 149 chr3R 25843635 intergenic CR45653 + chr3R 25843710 intergenic CR45653 + chr3R 25843784 intergenic CR45653 + chr3R_4_25840001 chr3R_25840001 RAL-83 1347 chr3R 26024728 26024749 chr3R 26025020 26025029 6 287 4.0 3.5 3.8 1.2 301 chr3R 26024728 intergenic E(spl)m4-BFM - chr3R 26024878 intergenic E(spl)m4-BFM - chr3R 26025029 intergenic E(spl)m4-BFM - chr3R_6_26020001 chr3R_26020001 RAL-83 1348 chr3R 26201652 26201668 chr3R 26201738 26201753 4 86 3.0 9.5 6.2 0.6 101 chr3R 26201652 intron CR44320 + chr3R 26201702 intron CR44320 + chr3R 26201753 intron CR44320 + chr3R_4_26200001 chr3R_26200001 RAL-83 1349 chr3R 26256003 26256043 chr3R 26256084 26256109 15 79 2.0 3.5 2.8 3.9 106 chr3R 26256003 intron Ald - chr3R 26256056 intron Ald - chr3R 26256109 intron Ald - chr3R_15_26255001 chr3R_26255001 RAL-83 1350 chr3R 26289731 26289752 chr3R 26289811 26289833 7 81 5.0 7.0 6.0 1.0 102 chr3R 26289731 intergenic not near genes chr3R 26289782 intergenic not near genes chr3R 26289833 intergenic not near genes chr3R_7_26285001 chr3R_26285001 RAL-83 1351 chr3R 26292104 26292141 chr3R 26292184 26292221 7 78 0.5 1.5 1.0 3.5 117 chr3R 26292104 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292221 intergenic not near genes chr3R_7_26290001 chr3R_26290001 RAL-83 1352 chr3R 26295089 26295111 chr3R 26295878 26295900 8 787 1.0 8.5 4.8 1.4 811 chr3R 26295089 intergenic not near genes chr3R 26295494 intergenic not near genes chr3R 26295900 intergenic not near genes chr3R_8_26295001 chr3R_26295001 RAL-83 1353 chr3R 26339226 26339258 chr3R 26339321 26339353 7 95 5.0 2.5 3.8 1.5 127 chr3R 26339226 intron CG33970 + chr3R 26339290 intron CG33970 + chr3R 26339353 intron CG33970 + chr3R_7_26335001 chr3R_26335001 RAL-83 1354 chr3R 26376327 26376353 chr3R 26385486 26385510 roo 4 9152 2.5 1.0 1.8 1.4 9183 chr3R 26376327 intergenic not near genes chr3R 26380918 intergenic not near genes chr3R 26385510 intergenic not near genes chr3R_4_26380001 chr3R_26380001 RAL-83 1355 chr3R 26407471 26407499 chr3R 26407549 26407556 4 68 2.5 0.0 1.2 1.8 85 chr3R 26407471 intergenic not near genes chr3R 26407514 intergenic not near genes chr3R 26407556 intergenic not near genes chr3R_4_26405001 chr3R_26405001 RAL-83 1356 chr3R 26541007 26541030 chr3R 26541086 26541109 4 79 0.0 2.5 1.2 1.8 102 chr3R 26541007 intron scrib + chr3R 26541058 intron scrib + chr3R 26541109 intron scrib + chr3R_4_26540001 chr3R_26540001 RAL-83 1357 chr3R 26542051 26542079 chr3R 26542136 26542170 11 84 5.5 3.5 4.5 2.0 119 chr3R 26542051 intron scrib + chr3R 26542110 intron scrib + chr3R 26542170 intron scrib + chr3R_11_26540001 chr3R_26540001 RAL-83 1358 chr3R 26558346 26558354 chr3R 26565658 26565666 Stalker4 4 7312 4.5 5.5 5.0 0.7 7320 chr3R 26558346 intron scrib + chr3R 26562006 intron scrib + chr3R 26565666 intron scrib + chr3R_4_26560001 chr3R_26560001 RAL-83 1359 chr3R 26641656 26641663 chr3R 26641723 26641750 4 82 4.5 4.0 4.2 0.8 94 chr3R 26641656 intergenic not near genes chr3R 26641703 intergenic not near genes chr3R 26641750 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-83 1360 chr3R 26642738 26642757 chr3R 26643121 26643150 jockey 8 390 2.5 1.0 1.8 2.9 412 chr3R 26642738 intergenic not near genes chr3R 26642944 intergenic not near genes chr3R 26643150 intergenic not near genes chr3R_8_26640001 chr3R_26640001 RAL-83 1361 chr3R 26703497 26703527 chr3R 26703625 26703655 5 127 3.0 3.5 3.2 1.2 158 chr3R 26703497 intron amon - chr3R 26703576 intron amon - chr3R 26703655 intron amon - chr3R_5_26700001 chr3R_26700001 RAL-83 1362 chr3R 26770241 26770265 chr3R 26770318 26770342 7 77 2.0 1.0 1.5 2.8 101 chr3R 26770241 intergenic CR45563 + chr3R 26770292 intergenic CR45563 + chr3R 26770342 intergenic not near genes chr3R_7_26770001 chr3R_26770001 RAL-83 1363 chr3R 26845578 26845605 chr3R 26845658 26845685 12 77 3.0 5.5 4.2 2.3 107 chr3R 26845578 intron Lerp - chr3R 26845632 intron Lerp - chr3R 26845685 intron Lerp - chr3R_12_26845001 chr3R_26845001 RAL-83 1364 chr3R 26888197 26888220 chr3R 26888274 26888280 11 75 1.0 6.0 3.5 2.4 83 chr3R 26888197 intron T48 + chr3R 26888238 intron T48 + chr3R 26888280 intron T48 + chr3R_11_26885001 chr3R_26885001 RAL-83 1365 chr3R 27028726 27028752 chr3R 27028805 27028831 8 78 3.5 3.5 3.5 1.8 105 chr3R 27028726 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028831 intron RYa-R + chr3R_8_27025001 chr3R_27025001 RAL-83 1366 chr3R 27030229 27030247 chr3R 27030352 27030376 4 127 4.0 0.0 2.0 1.3 147 chr3R 27030229 intron RYa-R + chr3R 27030302 intron RYa-R + chr3R 27030376 intron RYa-R + chr3R_4_27030001 chr3R_27030001 RAL-83 1367 chr3R 27077105 27077122 chr3R 27077185 27077201 4 79 6.0 5.0 5.5 0.6 96 chr3R 27077105 intron CG14257 + chr3R 27077153 intron CG14257 + chr3R 27077201 intron CG14257 + chr3R_4_27075001 chr3R_27075001 RAL-83 1368 chr3R 27080871 27080890 chr3R 27081208 27081229 5 338 4.0 2.0 3.0 1.2 358 chr3R 27080871 intron CG14257 + chr3R 27081050 intron CG14257 + chr3R 27081229 intron CG14257 + chr3R_5_27080001 chr3R_27080001 RAL-83 1369 chr3R 27140513 27140548 chr3R 27148123 27148157 412 21 7608 4.5 5.0 4.8 3.6 7644 chr3R 27140513 intron CG6051 - chr3R 27144335 intron CG6051 - chr3R 27148157 intron CG6051 - chr3R_21_27140001 chr3R_27140001 RAL-83 1370 chr3R 27223142 27223152 chr3R 27223245 27223263 5 109 2.0 12.0 7.0 0.6 121 chr3R 27223142 intergenic not near genes chr3R 27223202 intergenic not near genes chr3R 27223263 intergenic not near genes chr3R_5_27220001 chr3R_27220001 RAL-83 1371 chr3R 27329474 27329497 chr3R 27329550 27329574 5 76 2.5 1.5 2.0 1.7 100 chr3R 27329474 intergenic CG3330 - chr3R 27329524 intergenic CG3330 - chr3R 27329574 intergenic CG3330 - chr3R_5_27325001 chr3R_27325001 RAL-83 1372 chr3R 27342797 27342821 chr3R 27351378 27351401 Tirant 7 8581 1.5 3.0 2.2 2.2 8604 chr3R 27342797 intron CG42534 + chr3R 27347099 intron CG42534 + chr3R 27351401 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-83 1373 chr3R 27418705 27418715 chr3R 27418790 27418819 4 99 4.0 3.5 3.8 0.8 114 chr3R 27418705 5` UTR side - chr3R 27418762 5` UTR side - chr3R 27418819 5` UTR side - chr3R_4_27415001 chr3R_27415001 RAL-83 1374 chr3R 27494318 27494348 chr3R 27494437 27494467 4 119 1.0 0.0 0.5 2.7 149 chr3R 27494318 intergenic not near genes chr3R 27494392 intergenic not near genes chr3R 27494467 intergenic not near genes chr3R_4_27490001 chr3R_27490001 RAL-83 1375 chr3R 27555130 27555135 chr3R 27555305 27555312 4 176 1.0 3.5 2.2 1.2 182 chr3R 27555130 intron Klp98A - chr3R 27555221 intron Klp98A - chr3R 27555312 intron Klp98A - chr3R_4_27555001 chr3R_27555001 RAL-83 1376 chr3R 27571991 27572014 chr3R 27572067 27572090 5 75 2.5 3.0 2.8 1.3 99 chr3R 27571991 intron wdb - chr3R 27572040 intron wdb - chr3R 27572090 intron wdb - chr3R_5_27570001 chr3R_27570001 RAL-83 1377 chr3R 27628576 27628590 chr3R 27628668 27628682 6 92 5.0 7.0 6.0 0.9 106 chr3R 27628576 intron Tusp + chr3R 27628629 intron Tusp + chr3R 27628682 intron Tusp + chr3R_6_27625001 chr3R_27625001 RAL-83 1378 chr3R 27706778 27706806 chr3R 27706853 27706883 4 76 6.5 1.5 4.0 0.8 105 chr3R 27706778 intergenic CG12428 -,CG12877 + chr3R 27706830 intergenic CG12428 -,CG12877 + chr3R 27706883 intergenic CG12428 -,CG12877 + chr3R_4_27705001 chr3R_27705001 RAL-83 1379 chr3R 27723085 27723109 chr3R 27723207 27723209 5 117 8.5 4.5 6.5 0.7 124 chr3R 27723085 intergenic not near genes chr3R 27723147 intergenic not near genes chr3R 27723209 intergenic not near genes chr3R_5_27720001 chr3R_27720001 RAL-83 1380 chr3R 27725566 27725591 chr3R 27731007 27731033 I-element 10 5442 5.5 3.0 4.2 1.9 5467 chr3R 27725566 intergenic not near genes chr3R 27728300 intergenic not near genes chr3R 27731033 intergenic not near genes chr3R_10_27725001 chr3R_27725001 RAL-83 1381 chr3R 27779281 27779288 chr3R 27779358 27779359 4 75 6.5 13.0 9.8 0.4 78 chr3R 27779281 exon CG34353 - chr3R 27779320 intron CG34353 - chr3R 27779359 intron CG34353 - chr3R_4_27775001 chr3R_27775001 RAL-83 1382 chr3R 27786879 27786899 chr3R 27787024 27787044 6 142 8.5 3.0 5.8 0.9 165 chr3R 27786879 intron CG34353 - chr3R 27786962 intron CG34353 - chr3R 27787044 intron CG34353 - chr3R_6_27785001 chr3R_27785001 RAL-83 1383 chr3R 27841113 27841135 chr3R 27841190 27841216 10 78 3.5 2.0 2.8 2.6 103 chr3R 27841113 intron CG34353 - chr3R 27841164 intron CG34353 - chr3R 27841216 intron CG34353 - chr3R_10_27840001 chr3R_27840001 RAL-83 1384 chr3R 27856759 27856792 chr3R 27858242 27858275 hopper2 10 1482 7.0 2.0 4.5 1.8 1516 chr3R 27856759 intron CG34353 - chr3R 27857517 intron CG34353 - chr3R 27858275 intron CG34353 - chr3R_10_27855001 chr3R_27855001 RAL-83 1385 chr3R 27862957 27862987 chr3R 27868262 27868280 Transpac 8 5302 4.0 3.0 3.5 1.8 5323 chr3R 27862957 intron CG34353 - chr3R 27865618 intron CG34353 - chr3R 27868280 intron CG34353 - chr3R_8_27865001 chr3R_27865001 RAL-83 1386 chr3R 27875705 27875728 chr3R 27882760 27882783 297 5 7054 3.5 3.0 3.2 1.2 7078 chr3R 27875705 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882783 intron CG34353 - chr3R_5_27875001 chr3R_27875001 RAL-83 1387 chr3R 27982371 27982406 chr3R 27982464 27982498 16 92 4.0 2.0 3.0 4.0 127 chr3R 27982371 intron betaTub97EF - chr3R 27982434 intron betaTub97EF - chr3R 27982498 intron betaTub97EF - chr3R_16_27980001 chr3R_27980001 RAL-83 1388 chr3R 28103337 28103356 chr3R 28103416 28103447 4 88 1.5 4.0 2.8 1.1 110 chr3R 28103337 intergenic not near genes chr3R 28103392 intergenic not near genes chr3R 28103447 intergenic not near genes chr3R_4_28100001 chr3R_28100001 RAL-83 1389 chr3R 28153549 28153583 chr3R 28153638 28153672 13 87 3.0 1.5 2.2 4.1 123 chr3R 28153549 intron CG34354 + chr3R 28153610 intron CG34354 + chr3R 28153672 intron CG34354 + chr3R_13_28150001 chr3R_28150001 RAL-83 1390 chr3R 28172966 28172994 chr3R 28173123 28173141 7 155 1.0 3.0 2.0 2.3 175 chr3R 28172966 intron CG34354 + chr3R 28173054 intron CG34354 + chr3R 28173141 intron CG34354 + chr3R_7_28170001 chr3R_28170001 RAL-83 1391 chr3R 28173671 28173703 chr3R 28181101 28181133 mdg1 4 7430 0.5 1.0 0.8 2.2 7462 chr3R 28173671 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181133 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-83 1392 chr3R 28253351 28253372 chr3R 28255848 28255865 jockey 8 2505 4.5 1.0 2.8 2.1 2514 chr3R 28253351 intergenic not near genes chr3R 28254608 intergenic not near genes chr3R 28255865 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-83 1393 chr3R 28307300 28307325 chr3R 28307501 28307525 7 201 2.5 8.0 5.2 1.1 225 chr3R 28307300 intergenic not near genes chr3R 28307412 intergenic not near genes chr3R 28307525 intergenic not near genes chr3R_7_28305001 chr3R_28305001 RAL-83 1394 chr3R 28352512 28352545 chr3R 28352852 28352868 11 338 3.0 5.0 4.0 2.2 356 chr3R 28352512 exon Or98b + chr3R 28352690 exon Or98b + chr3R 28352868 exon Or98b + chr3R_11_28350001 chr3R_28350001 RAL-83 1395 chr3R 28358857 28358891 chr3R 28359197 28359231 18 334 2.5 8.5 5.5 2.8 374 chr3R 28358857 intergenic not near genes chr3R 28359044 intergenic not near genes chr3R 28359231 intergenic not near genes chr3R_18_28355001 chr3R_28355001 RAL-83 1396 chr3R 28380789 28380825 chr3R 28381022 28381043 8 225 2.0 6.5 4.2 1.5 254 chr3R 28380789 intergenic not near genes chr3R 28380916 intergenic not near genes chr3R 28381043 intergenic not near genes chr3R_8_28380001 chr3R_28380001 RAL-83 1397 chr3R 28382152 28382169 chr3R 28382234 28382252 8 82 6.5 4.0 5.2 1.3 100 chr3R 28382152 intergenic not near genes chr3R 28382202 intergenic not near genes chr3R 28382252 intergenic not near genes chr3R_8_28380001 chr3R_28380001 RAL-83 1398 chr3R 28393698 28393729 chr3R 28393798 28393829 6 100 2.5 2.0 2.2 1.9 131 chr3R 28393698 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393829 intergenic not near genes chr3R_6_28390001 chr3R_28390001 RAL-83 1399 chr3R 28429469 28429486 chr3R 28429534 28429556 4 72 3.0 3.0 3.0 1.0 87 chr3R 28429469 intron beat-VI + chr3R 28429512 intron beat-VI + chr3R 28429556 intron beat-VI + chr3R_4_28425001 chr3R_28425001 RAL-83 1400 chr3R 28430921 28430955 chr3R 28431027 28431061 9 104 5.0 2.0 3.5 2.0 140 chr3R 28430921 intron beat-VI + chr3R 28430991 intron beat-VI + chr3R 28431061 intron beat-VI + chr3R_9_28430001 chr3R_28430001 RAL-83 1401 chr3R 28478216 28478235 chr3R 28478321 28478341 4 106 4.0 2.5 3.2 1.0 125 chr3R 28478216 intergenic not near genes chr3R 28478278 intergenic not near genes chr3R 28478341 intergenic not near genes chr3R_4_28475001 chr3R_28475001 RAL-83 1402 chr3R 28478986 28479165 chr3R 28479082 28479248 13 92 1.5 3.0 2.2 4.1 262 chr3R 28478986 intergenic not near genes chr3R 28479117 intergenic not near genes chr3R 28479248 intergenic not near genes chr3R_13_28475001 chr3R_28475001 RAL-83 1403 chr3R 28484353 28484374 chr3R 28486270 28486292 17 1918 27.5 39.5 33.5 0.5 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_17_28485001 chr3R_28485001 RAL-83 1404 chr3R 28626192 28626219 chr3R 28626292 28626319 20 98 2.0 1.5 1.8 7.1 127 chr3R 28626192 intron CG10011 - chr3R 28626256 intron CG10011 - chr3R 28626319 intron CG10011 - chr3R_20_28625001 chr3R_28625001 RAL-83 1405 chr3R 28662368 28662400 chr3R 28662523 28662555 17 155 5.5 2.5 4.0 3.4 187 chr3R 28662368 intergenic not near genes chr3R 28662462 intergenic not near genes chr3R 28662555 intergenic not near genes chr3R_17_28660001 chr3R_28660001 RAL-83 1406 chr3R 28742502 28742515 chr3R 28742563 28742591 5 73 1.5 0.5 1.0 2.5 89 chr3R 28742502 intron AstA-R2 - chr3R 28742546 intron AstA-R2 - chr3R 28742591 intron AstA-R2 - chr3R_5_28740001 chr3R_28740001 RAL-83 1407 chr3R 28787955 28787965 chr3R 28788065 28788075 5 110 3.5 3.0 3.2 1.2 120 chr3R 28787955 intergenic not near genes chr3R 28788015 intergenic not near genes chr3R 28788075 intergenic not near genes chr3R_5_28785001 chr3R_28785001 RAL-83 1408 chr3R 28787966 28787975 chr3R 28788059 28788085 5 104 3.0 3.0 3.0 1.2 119 chr3R 28787966 intergenic not near genes chr3R 28788026 intergenic not near genes chr3R 28788085 intergenic not near genes chr3R_5_28785001 chr3R_28785001 RAL-83 1409 chr3R 28792874 28792904 chr3R 28797968 28797998 jockey 12 5093 1.0 5.0 3.0 3.0 5124 chr3R 28792874 intergenic not near genes chr3R 28795436 intergenic not near genes chr3R 28797998 intergenic not near genes chr3R_12_28795001 chr3R_28795001 RAL-83 1410 chr3R 28811568 28811598 chr3R 28811714 28811744 5 146 4.0 0.0 2.0 1.7 176 chr3R 28811568 intergenic wdn - chr3R 28811656 intergenic wdn -,CG1646 + chr3R 28811744 intergenic CG1646 +,wdn - chr3R_5_28810001 chr3R_28810001 RAL-83 1411 chr3R 21907534 21907536 chr3R 28831799 28831801 25 6924266 26.0 27.5 26.8 0.9 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_25_25365001 chr3R_25365001 RAL-83 1412 chr3R 21907534 21907536 chr3R 28831802 28831802 28 6924267 26.0 29.0 27.5 1.0 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_28_25365001 chr3R_25365001 RAL-83 1413 chr3R 21907534 21907536 chr3R 29013340 29013340 9 7105805 26.0 22.0 24.0 0.4 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_9_25460001 chr3R_25460001 RAL-83 1414 chr3R 29079384 29079409 chr3R 29080756 29080781 NOF 10 1372 2.5 5.5 4.0 2.0 1397 chr3R 29079384 intron CG11873 + chr3R 29080082 intron CG11873 + chr3R 29080781 intron CG11873 + chr3R_10_29080001 chr3R_29080001 RAL-83 1415 chr3R 29207525 29207551 chr3R 29207710 29207723 5 187 3.5 4.5 4.0 1.0 198 chr3R 29207525 intergenic not near genes chr3R 29207624 intergenic not near genes chr3R 29207723 intergenic not near genes chr3R_5_29205001 chr3R_29205001 RAL-83 1416 chr3R 29213059 29213087 chr3R 29213142 29213170 15 82 3.5 2.5 3.0 3.8 111 chr3R 29213059 intergenic not near genes chr3R 29213114 intergenic not near genes chr3R 29213170 intergenic not near genes chr3R_15_29210001 chr3R_29210001 RAL-83 1417 chr3R 29237252 29237284 chr3R 29239268 29239271 13 2017 14.0 6.0 10.0 1.2 2019 chr3R 29237252 exon CG11951 - chr3R 29238262 intron CG11951 - chr3R 29239271 exon CG31427 - chr3R_13_29235001 chr3R_29235001 RAL-83 1418 chr3R 29332282 29332309 chr3R 29332359 29332386 11 76 3.0 2.0 2.5 3.1 104 chr3R 29332282 intergenic not near genes chr3R 29332334 intergenic not near genes chr3R 29332386 intergenic not near genes chr3R_11_29330001 chr3R_29330001 RAL-83 1419 chr3R 29351733 29351753 chr3R 29351816 29351838 10 82 3.5 2.5 3.0 2.5 105 chr3R 29351733 intergenic not near genes chr3R 29351786 intergenic not near genes chr3R 29351838 intergenic not near genes chr3R_10_29350001 chr3R_29350001 RAL-83 1420 chr3R 29362855 29362883 chr3R 29362944 29362972 7 89 0.0 3.0 1.5 2.8 117 chr3R 29362855 intergenic not near genes chr3R 29362914 intergenic not near genes chr3R 29362972 intergenic not near genes chr3R_7_29360001 chr3R_29360001 RAL-83 1421 chr3R 29406630 29406642 chr3R 29407899 29407928 jockey 6 1276 3.5 5.0 4.2 1.2 1298 chr3R 29406630 intron Ptp99A + chr3R 29407279 intron Ptp99A + chr3R 29407928 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 RAL-83 1422 chr3R 29449370 29449390 chr3R 29449448 29449468 5 77 2.0 3.5 2.8 1.3 98 chr3R 29449370 intron Ptp99A + chr3R 29449419 intron Ptp99A + chr3R 29449468 intron Ptp99A + chr3R_5_29445001 chr3R_29445001 RAL-83 1423 chr3R 29550255 29550274 chr3R 29550336 29550352 7 80 6.5 4.0 5.2 1.1 97 chr3R 29550255 intergenic not near genes chr3R 29550304 intergenic not near genes chr3R 29550352 intergenic not near genes chr3R_7_29550001 chr3R_29550001 RAL-83 1424 chr3R 29738263 29738301 chr3R 29739729 29739768 hobo 20 1467 1.0 2.5 1.8 7.1 1505 chr3R 29738263 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739768 5` UTR CG1969 + chr3R_20_29735001 chr3R_29735001 RAL-83 1425 chr3R 29754978 29754989 chr3R 29755055 29755066 5 77 0.0 8.0 4.0 1.0 88 chr3R 29754978 intergenic CR44953 -,yata + chr3R 29755022 intergenic CR44953 -,yata + chr3R 29755066 intergenic CR44953 - chr3R_5_29755001 chr3R_29755001 RAL-83 1426 chr3R 29831820 29831841 chr3R 29831896 29831926 5 83 2.0 4.5 3.2 1.2 106 chr3R 29831820 exon Atg16 - chr3R 29831873 intron Atg16 - chr3R 29831926 exon Atg16 - chr3R_5_29830001 chr3R_29830001 RAL-83 1427 chr3R 29854827 29854860 chr3R 29854907 29854940 7 76 2.0 5.5 3.8 1.5 113 chr3R 29854827 3` UTR dgt1 - chr3R 29854884 exon dgt1 - chr3R 29854940 exon dgt1 - chr3R_7_29850001 chr3R_29850001 RAL-83 1428 chr3R 29882023 29882053 chr3R 29891180 29891210 roo 7 9157 3.0 4.5 3.8 1.5 9187 chr3R 29882023 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891210 intron CG31038 + chr3R_7_29885001 chr3R_29885001 RAL-83 1429 chr3R 29980827 29980836 chr3R 29980899 29980911 4 76 4.0 3.0 3.5 0.9 84 chr3R 29980827 intergenic not near genes chr3R 29980869 intergenic not near genes chr3R 29980911 intergenic not near genes chr3R_4_29980001 chr3R_29980001 RAL-83 1430 chr3R 30075567 30075590 chr3R 30075656 30075679 5 89 0.0 3.5 1.8 1.8 112 chr3R 30075567 intron sima + chr3R 30075623 intron sima + chr3R 30075679 intron sima + chr3R_5_30075001 chr3R_30075001 RAL-83 1431 chr3R 30080461 30080482 chr3R 30080540 30080561 9 77 1.0 3.5 2.2 2.8 100 chr3R 30080461 intron sima + chr3R 30080511 intron sima + chr3R 30080561 intron sima + chr3R_9_30080001 chr3R_30080001 RAL-83 1432 chr3R 30084847 30084881 chr3R 30086314 30086348 hobo 14 1466 3.0 5.5 4.2 2.7 1501 chr3R 30084847 intron sima + chr3R 30085598 intron sima + chr3R 30086348 intron sima + chr3R_14_30085001 chr3R_30085001 RAL-83 1433 chr3R 30317325 30317359 chr3R 30324917 30324951 roo 8 7592 1.0 2.5 1.8 2.9 7626 chr3R 30317325 intron hdc + chr3R 30321138 intron hdc + chr3R 30324951 intron hdc + chr3R_8_30320001 chr3R_30320001 RAL-83 1434 chr3R 30330492 30330525 chr3R 30330572 30330605 8 76 3.5 5.5 4.5 1.5 113 chr3R 30330492 intron hdc + chr3R 30330548 intron hdc + chr3R 30330605 intron hdc + chr3R_8_30330001 chr3R_30330001 RAL-83 1435 chr3R 30339557 30339580 chr3R 30339865 30339889 10 309 4.5 8.0 6.2 1.4 332 chr3R 30339557 intron hdc + chr3R 30339723 intron hdc + chr3R 30339889 intron hdc + chr3R_10_30335001 chr3R_30335001 RAL-83 1436 chr3R 30396222 30396247 chr3R 30404488 30404513 roo 5 8266 5.5 6.5 6.0 0.7 8291 chr3R 30396222 intergenic not near genes chr3R 30400368 intergenic not near genes chr3R 30404513 5` UTR CR45570 + chr3R_5_30400001 chr3R_30400001 RAL-83 1437 chr3R 30480484 30480508 chr3R 30482940 30482976 jockey 9 2463 2.5 1.5 2.0 3.0 2492 chr3R 30480484 intron PH4alphaEFB + chr3R 30481730 intron PH4alphaEFB + chr3R 30482976 intron PH4alphaEFB + chr3R_9_30480001 chr3R_30480001 RAL-83 1438 chr3R 30483444 30483479 chr3R 30483522 30483539 7 75 3.5 7.0 5.2 1.1 95 chr3R 30483444 intron PH4alphaEFB + chr3R 30483492 intron PH4alphaEFB + chr3R 30483539 intron PH4alphaEFB + chr3R_7_30480001 chr3R_30480001 RAL-83 1439 chr3R 30498411 30498429 chr3R 30498605 30498629 6 199 0.0 2.5 1.2 2.7 218 chr3R 30498411 intron PH4alphaNE1 - chr3R 30498520 intron PH4alphaNE1 - chr3R 30498629 intron PH4alphaNE1 - chr3R_6_30495001 chr3R_30495001 RAL-83 1440 chr3R 30536489 30536520 chr3R 30536570 30536601 5 75 1.5 0.0 0.8 2.8 112 chr3R 30536489 intron tmod + chr3R 30536545 intron tmod + chr3R 30536601 intron tmod + chr3R_5_30535001 chr3R_30535001 RAL-83 1441 chr3R 30620842 30620854 chr3R 30620922 30620934 6 80 7.5 8.0 7.8 0.7 92 chr3R 30620842 intron CG44954 - chr3R 30620888 intron CG44954 - chr3R 30620934 intron CG44954 - chr3R_6_30620001 chr3R_30620001 RAL-83 1442 chr3R 30627607 30627637 chr3R 30627685 30627717 9 76 4.0 7.0 5.5 1.4 110 chr3R 30627607 exon CG2267 - chr3R 30627662 exon CG2267 - chr3R 30627717 exon CG2267 - chr3R_9_30625001 chr3R_30625001 RAL-83 1443 chr3R 30679518 30679552 chr3R 30686987 30687021 blood 8 7468 2.5 7.5 5.0 1.3 7503 chr3R 30679518 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687021 intergenic not near genes chr3R_8_30680001 chr3R_30680001 RAL-83 1444 chr3R 30812744 30812754 chr3R 30812832 30812842 5 87 0.0 2.5 1.2 2.3 98 chr3R 30812744 intron cindr + chr3R 30812793 intron cindr + chr3R 30812842 intron cindr + chr3R_5_30810001 chr3R_30810001 RAL-83 1445 chr3R 30818809 30818824 chr3R 30820374 30820389 1360 5 1565 4.0 0.5 2.2 1.6 1580 chr3R 30818809 intron cindr + chr3R 30819599 intron cindr + chr3R 30820389 intron cindr + chr3R_5_30815001 chr3R_30815001 RAL-83 1446 chr3R 30830564 30830597 chr3R 30830645 30830680 10 80 2.5 1.5 2.0 3.3 116 chr3R 30830564 intron CG15544 + chr3R 30830622 intron CG15544 + chr3R 30830680 intron CG15544 + chr3R_10_30830001 chr3R_30830001 RAL-83 1447 chr3R 30850242 30850270 chr3R 30850333 30850362 6 92 2.5 2.0 2.2 1.9 120 chr3R 30850242 intergenic not near genes chr3R 30850302 intergenic not near genes chr3R 30850362 intergenic not near genes chr3R_6_30850001 chr3R_30850001 RAL-83 1448 chr3R 30894758 30894768 chr3R 30894839 30894850 4 82 5.5 3.0 4.2 0.8 92 chr3R 30894758 intron Cyp4c3 + chr3R 30894804 intron Cyp4c3 + chr3R 30894850 intron Cyp4c3 + chr3R_4_30890001 chr3R_30890001 RAL-83 1449 chr3R 30894772 30894788 chr3R 30894834 30894870 6 78 2.0 2.0 2.0 2.0 98 chr3R 30894772 intron Cyp4c3 + chr3R 30894821 intron Cyp4c3 + chr3R 30894870 intron Cyp4c3 + chr3R_6_30890001 chr3R_30890001 RAL-83 1450 chr3R 30899157 30899185 chr3R 30899441 30899470 17 283 2.5 2.5 2.5 4.9 313 chr3R 30899157 intron Cyp4c3 + chr3R 30899314 intron Cyp4c3 + chr3R 30899470 intron Cyp4c3 + chr3R_17_30895001 chr3R_30895001 RAL-83 1451 chr3R 30981954 30981979 chr3R 30982187 30982212 17 232 3.0 4.0 3.5 3.8 258 chr3R 30981954 intron 5-HT7 - chr3R 30982083 intron 5-HT7 - chr3R 30982212 intron 5-HT7 - chr3R_17_30980001 chr3R_30980001 RAL-83 1452 chr3R 31010709 31010738 chr3R 31010789 31010821 8 82 2.0 0.0 1.0 4.0 112 chr3R 31010709 intron 5-HT7 - chr3R 31010765 intron 5-HT7 - chr3R 31010821 intron 5-HT7 - chr3R_8_31010001 chr3R_31010001 RAL-83 1453 chr3R 31020310 31020333 chr3R 31020484 31020506 5 174 4.5 6.5 5.5 0.8 196 chr3R 31020310 intergenic not near genes chr3R 31020408 intergenic not near genes chr3R 31020506 intergenic not near genes chr3R_5_31020001 chr3R_31020001 RAL-83 1454 chr3R 31074233 31074262 chr3R 31081831 31081860 springer 14 7596 4.0 4.5 4.2 2.7 7627 chr3R 31074233 intron Sox100B + chr3R 31078046 intron Sox100B + chr3R 31081860 intron Sox100B + chr3R_14_31075001 chr3R_31075001 RAL-83 1455 chr3R 31245771 31245784 chr3R 31245857 31245866 5 85 6.0 2.0 4.0 1.0 95 chr3R 31245771 intron qless - chr3R 31245818 intron qless - chr3R 31245866 intron qless - chr3R_5_31245001 chr3R_31245001 RAL-83 1456 chr3R 31279371 31279407 chr3R 31285562 31285598 diver 14 6189 3.0 5.0 4.0 2.8 6227 chr3R 31279371 intergenic not near genes chr3R 31282484 intergenic not near genes chr3R 31285598 intergenic not near genes chr3R_14_31280001 chr3R_31280001 RAL-83 1457 chr3R 31413088 31413115 chr3R 31418288 31418315 copia 9 5199 4.0 0.5 2.2 2.8 5227 chr3R 31413088 intron Gprk2 + chr3R 31415702 intron Gprk2 + chr3R 31418315 intron Gprk2 + chr3R_9_31415001 chr3R_31415001 RAL-83 1458 chr3R 31435361 31435388 chr3R 31435513 31435540 11 152 3.5 1.0 2.2 3.4 179 chr3R 31435361 intron Gprk2 + chr3R 31435450 intron Gprk2 + chr3R 31435540 intron Gprk2 + chr3R_11_31435001 chr3R_31435001 RAL-83 1459 chr3R 31691530 31691562 chr3R 31696296 31696312 Doc 12 4763 3.5 6.0 4.8 2.1 4782 chr3R 31691530 intergenic not near genes chr3R 31693921 intergenic not near genes chr3R 31696312 intergenic not near genes chr3R_12_31690001 chr3R_31690001 RAL-83 1460 chr3R 31858196 31858206 chr3R 31858288 31858308 5 97 0.0 4.0 2.0 1.7 112 chr3R 31858196 intron heph - chr3R 31858252 intron heph - chr3R 31858308 intron heph - chr3R_5_31855001 chr3R_31855001 RAL-83 1461 chr3R 31858746 31858775 chr3R 31858830 31858859 4 83 7.0 1.5 4.2 0.8 113 chr3R 31858746 intron heph - chr3R 31858802 intron heph - chr3R 31858859 intron heph - chr3R_4_31855001 chr3R_31855001 RAL-83 1462 chr3R 31930899 31931197 chr3R 31931010 31931280 5 88 3.0 5.5 4.2 1.0 381 chr3R 31930899 intron heph - chr3R 31931090 intron heph - chr3R 31931280 intron heph - chr3R_5_31930001 chr3R_31930001 RAL-83 1463 chr3R 31997996 31998024 chr3R 32005465 32005493 blood 7 7469 1.5 2.5 2.0 2.3 7497 chr3R 31997996 intron heph - chr3R 32001744 intron heph - chr3R 32005493 intron heph - chr3R_7_32000001 chr3R_32000001 RAL-83 1464 chr4 671617 671633 chr4 680195 680216 Tirant 5 8578 2.5 4.5 3.5 1.1 8599 chr4 671617 intron CG11360 + chr4 675916 intron CG11360 + chr4 680216 intron CG11360 + chr4_5_675001 chr4_675001 RAL-83 1465 chrX 318484 318498 chrX 323564 323584 flea 4 5084 1.0 3.0 2.0 1.3 5100 chrX 318484 intron,intron CG3777 +,CG32816 - chrX 321034 intron,intron CG3777 +,CG32816 - chrX 323584 intron,intron CG3777 +,CG32816 - chrX_4_320001 chrX_320001 RAL-83 1466 chrX 551430 551449 chrX 558990 559011 412 4 7560 6.5 7.0 6.8 0.5 7581 chrX 551430 intron Appl + chrX 555220 intron Appl + chrX 559011 intron Appl + chrX_4_555001 chrX_555001 RAL-83 1467 chrX 778126 778160 chrX 778215 778250 9 87 1.5 1.0 1.2 4.1 124 chrX 778126 intron fz3 + chrX 778188 intron fz3 + chrX 778250 intron fz3 + chrX_9_775001 chrX_775001 RAL-83 1468 chrX 780592 780602 chrX 780668 780678 4 76 2.5 0.0 1.2 1.8 86 chrX 780592 intron fz3 + chrX 780635 intron fz3 + chrX 780678 intron fz3 + chrX_4_780001 chrX_780001 RAL-83 1469 chrX 827600 827628 chrX 835392 835402 roo 5 7787 4.5 0.0 2.2 1.6 7802 chrX 827600 intron CG43867 - chrX 831501 intron CG43867 - chrX 835402 intron CG43867 - chrX_5_830001 chrX_830001 RAL-83 1470 chrX 903533 903549 chrX 903659 903676 4 125 8.0 4.0 6.0 0.6 143 chrX 903533 intron CG43867 - chrX 903604 intron CG43867 - chrX 903676 intron CG43867 - chrX_4_900001 chrX_900001 RAL-83 1471 chrX 906713 906729 chrX 908502 908518 S-element 5 1789 1.5 4.0 2.8 1.3 1805 chrX 906713 intron CG43867 - chrX 907616 intron CG43867 - chrX 908518 intron CG43867 - chrX_5_905001 chrX_905001 RAL-83 1472 chrX 963561 963591 chrX 963637 963658 10 73 4.0 2.5 3.2 2.4 97 chrX 963561 intergenic not near genes chrX 963610 intergenic not near genes chrX 963658 intergenic not near genes chrX_10_960001 chrX_960001 RAL-83 1473 chrX 1253739 1253761 chrX 1253811 1253827 10 79 3.0 5.0 4.0 2.0 88 chrX 1253739 intron Atf3 - chrX 1253783 intron Atf3 - chrX 1253827 intron Atf3 - chrX_10_1250001 chrX_1250001 RAL-83 1474 chrX 1277240 1277250 chrX 1277406 1277419 4 167 5.0 1.5 3.2 1.0 179 chrX 1277240 intergenic not near genes chrX 1277330 intergenic not near genes chrX 1277419 intergenic not near genes chrX_4_1275001 chrX_1275001 RAL-83 1475 chrX 1357779 1357808 chrX 1367949 1367978 Doc 7 10170 2.5 1.5 2.0 2.3 10199 chrX 1357779 intergenic png - chrX 1362878 intergenic not near genes chrX 1367978 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-83 1476 chrX 1518040 1518074 chrX 1523442 1523476 jockey 13 5400 1.0 2.0 1.5 5.2 5436 chrX 1518040 intergenic inc + chrX 1520758 intergenic not near genes chrX 1523476 intergenic not near genes chrX_13_1520001 chrX_1520001 RAL-83 1477 chrX 1627979 1628004 chrX 1635444 1635462 gtwin 7 7460 4.0 4.0 4.0 1.4 7483 chrX 1627979 intron,intron Mur2B -,br + chrX 1631720 intron,intron Mur2B -,br + chrX 1635462 intron,intron Mur2B -,br + chrX_7_1630001 chrX_1630001 RAL-83 1478 chrX 1750640 1750657 chrX 1750724 1750740 8 92 3.5 3.0 3.2 1.9 100 chrX 1750640 intron Scgdelta - chrX 1750690 intron Scgdelta - chrX 1750740 intron Scgdelta - chrX_8_1750001 chrX_1750001 RAL-83 1479 chrX 1753140 1753150 chrX 1753218 1753228 5 78 5.5 3.0 4.2 1.0 88 chrX 1753140 intron Scgdelta - chrX 1753184 intron Scgdelta - chrX 1753228 intron Scgdelta - chrX_5_1750001 chrX_1750001 RAL-83 1480 chrX 1753153 1753162 chrX 1753213 1753216 4 62 5.5 2.0 3.8 0.8 63 chrX 1753153 intron Scgdelta - chrX 1753184 intron Scgdelta - chrX 1753216 intron Scgdelta - chrX_4_1750001 chrX_1750001 RAL-83 1481 chrX 1762641 1762662 chrX 1762726 1762747 7 84 1.0 5.5 3.2 1.7 106 chrX 1762641 intergenic not near genes chrX 1762694 intergenic not near genes chrX 1762747 intergenic not near genes chrX_7_1760001 chrX_1760001 RAL-83 1482 chrX 1845737 1845758 chrX 1845837 1845858 9 100 4.0 3.0 3.5 2.0 121 chrX 1845737 intron CG42666 + chrX 1845798 intron CG42666 + chrX 1845858 intron CG42666 + chrX_9_1845001 chrX_1845001 RAL-83 1483 chrX 1954886 1954916 chrX 1962826 1962856 Stalker2 5 7934 3.0 1.5 2.2 1.6 7970 chrX 1954886 intron Hr4 + chrX 1958871 intron Hr4 + chrX 1962856 intron Hr4 + chrX_5_1955001 chrX_1955001 RAL-83 1484 chrX 2069366 2069384 chrX 2069466 2069479 5 99 2.5 1.0 1.8 1.8 113 chrX 2069366 intron,exon CG4199 -,CG4194 + chrX 2069422 intron,3` UTR CG4199 -,CG4194 + chrX 2069479 intron,3` UTR CG4199 -,CG4194 + chrX_5_2065001 chrX_2065001 RAL-83 1485 chrX 2096365 2096389 chrX 2096458 2096482 8 90 0.5 1.5 1.0 4.0 117 chrX 2096365 intron csw + chrX 2096424 intron csw + chrX 2096482 intron csw + chrX_8_2095001 chrX_2095001 RAL-83 1486 chrX 2353836 2353850 chrX 2353911 2353927 4 76 3.0 2.5 2.8 1.1 91 chrX 2353836 intron ptr - chrX 2353882 intron ptr - chrX 2353927 intron ptr - chrX_4_2350001 chrX_2350001 RAL-83 1487 chrX 2399844 2399870 chrX 2408189 2408200 roo 5 8341 5.5 1.0 3.2 1.2 8356 chrX 2399844 intergenic not near genes chrX 2404022 intergenic not near genes chrX 2408200 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-83 1488 chrX 2578827 2578845 chrX 2578903 2578937 5 88 2.0 1.5 1.8 1.8 110 chrX 2578827 intergenic Pdfr +,Vha36-3 - chrX 2578882 intergenic Vha36-3 -,Pdfr + chrX 2578937 intergenic Vha36-3 -,Pdfr + chrX_5_2575001 chrX_2575001 RAL-83 1489 chrX 2757704 2757732 chrX 2757841 2757862 16 139 2.5 3.0 2.8 4.2 158 chrX 2757704 intron kirre + chrX 2757783 intron kirre + chrX 2757862 intron kirre + chrX_16_2755001 chrX_2755001 RAL-83 1490 chrX 2888112 2888136 chrX 2888190 2888203 11 77 4.0 2.0 3.0 2.8 91 chrX 2888112 intron kirre + chrX 2888158 intron kirre + chrX 2888203 intron kirre + chrX_11_2885001 chrX_2885001 RAL-83 1491 chrX 2917094 2917123 chrX 2917174 2917203 4 78 2.0 2.0 2.0 1.3 109 chrX 2917094 intron kirre + chrX 2917148 intron kirre + chrX 2917203 intron kirre + chrX_4_2915001 chrX_2915001 RAL-83 1492 chrX 3058035 3058052 chrX 3058276 3058293 pogo 4 241 3.5 3.5 3.5 0.9 258 chrX 3058035 intron kirre + chrX 3058164 intron kirre + chrX 3058293 intron kirre + chrX_4_3055001 chrX_3055001 RAL-83 1493 chrX 3306351 3306366 chrX 3306432 3306439 4 79 5.5 0.5 3.0 1.0 88 chrX 3306351 intron dnc + chrX 3306395 intron dnc + chrX 3306439 intron dnc + chrX_4_3305001 chrX_3305001 RAL-83 1494 chrX 3415023 3415050 chrX 3421207 3421235 3S18 7 6185 0.5 0.0 0.2 5.8 6212 chrX 3415023 intron,intron CR44999 +,CG12535 - chrX 3418129 intron,intron CR44999 +,CG12535 - chrX 3421235 intron,intron CR44999 +,CG12535 - chrX_7_3415001 chrX_3415001 RAL-83 1495 chrX 3513764 3513789 chrX 3513847 3513872 6 81 0.5 1.0 0.8 3.3 108 chrX 3513764 intron,intron CR44999 +,CG32791 - chrX 3513818 intron,intron CR44999 +,CG32791 - chrX 3513872 intron,intron CR44999 +,CG32791 - chrX_6_3510001 chrX_3510001 RAL-83 1496 chrX 3519271 3519294 chrX 3519612 3519632 8 340 6.0 3.5 4.8 1.4 361 chrX 3519271 intron,intron CR44999 +,CG32791 - chrX 3519452 intron,intron CR44999 +,CG32791 - chrX 3519632 intron,intron CR44999 +,CG32791 - chrX_8_3515001 chrX_3515001 RAL-83 1497 chrX 3597552 3597584 chrX 3619720 3619752 roo 8 22167 2.5 3.0 2.8 2.1 22200 chrX 3597552 intron AstA-R1 + chrX 3608652 intron AstA-R1 + chrX 3619752 intron AstA-R1 + chrX_8_3605001 chrX_3605001 RAL-83 1498 chrX 3630543 3630574 chrX 3630619 3630630 5 69 2.0 1.0 1.5 2.0 87 chrX 3630543 intron AstA-R1 + chrX 3630586 intron AstA-R1 + chrX 3630630 intron AstA-R1 + chrX_5_3630001 chrX_3630001 RAL-83 1499 chrX 3866126 3866137 chrX 3866204 3866213 4 78 0.5 1.5 1.0 2.0 87 chrX 3866126 intron yin - chrX 3866170 intron yin - chrX 3866213 intron yin - chrX_4_3865001 chrX_3865001 RAL-83 1500 chrX 3881268 3881305 chrX 3881407 3881444 12 138 2.0 1.0 1.5 4.8 176 chrX 3881268 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881444 intron VhaAC39-1 + chrX_12_3880001 chrX_3880001 RAL-83 1501 chrX 3986867 3986890 chrX 3994500 3994523 412 11 7632 4.0 3.0 3.5 2.4 7656 chrX 3986867 intergenic not near genes chrX 3990695 intergenic not near genes chrX 3994523 intergenic not near genes chrX_11_3990001 chrX_3990001 RAL-83 1502 chrX 4014855 4014864 chrX 4014947 4014957 5 92 0.5 1.0 0.8 2.8 102 chrX 4014855 intergenic not near genes chrX 4014906 intergenic not near genes chrX 4014957 intergenic not near genes chrX_5_4010001 chrX_4010001 RAL-83 1503 chrX 4047468 4047496 chrX 4047581 4047609 11 111 5.5 2.0 3.8 2.3 141 chrX 4047468 intergenic CR45482 - chrX 4047538 intergenic CR45482 - chrX 4047609 3` UTR CR45482 - chrX_11_4045001 chrX_4045001 RAL-83 1504 chrX 4048508 4048525 chrX 4048584 4048601 8 76 0.5 4.0 2.2 2.5 93 chrX 4048508 3` UTR CR45482 - chrX 4048554 3` UTR CR45482 - chrX 4048601 3` UTR CR45482 - chrX_8_4045001 chrX_4045001 RAL-83 1505 chrX 4252952 4252978 chrX 4253040 4253066 8 86 1.5 3.0 2.2 2.5 114 chrX 4252952 intergenic CG15576 - chrX 4253009 intergenic CG15576 - chrX 4253066 intergenic CG15576 - chrX_8_4250001 chrX_4250001 RAL-83 1506 chrX 4436460 4436468 chrX 4436536 4436541 5 75 6.5 1.0 3.8 1.0 81 chrX 4436460 intron,intron CR32773 -,bi + chrX 4436500 intron,intron CR32773 -,bi + chrX 4436541 intron,intron CR32773 -,bi + chrX_5_4435001 chrX_4435001 RAL-83 1507 chrX 4515837 4515859 chrX 4515915 4515937 9 77 0.5 1.5 1.0 4.5 100 chrX 4515837 intron CR32773 - chrX 4515887 intron CR32773 - chrX 4515937 intron CR32773 - chrX_9_4515001 chrX_4515001 RAL-83 1508 chrX 4731821 4731831 chrX 4736905 4736924 jockey 6 5092 8.0 7.0 7.5 0.7 5103 chrX 4731821 intergenic not near genes chrX 4734372 intergenic not near genes chrX 4736924 intergenic not near genes chrX_6_4730001 chrX_4730001 RAL-83 1509 chrX 4763257 4763276 chrX 4763745 4763764 Stalker4 8 487 4.5 3.0 3.8 1.7 507 chrX 4763257 intergenic not near genes chrX 4763510 intergenic not near genes chrX 4763764 intergenic not near genes chrX_8_4760001 chrX_4760001 RAL-83 1510 chrX 4792380 4792400 chrX 4792813 4792832 jockey 4 433 3.0 7.0 5.0 0.7 452 chrX 4792380 intergenic not near genes chrX 4792606 intergenic not near genes chrX 4792832 intergenic not near genes chrX_4_4790001 chrX_4790001 RAL-83 1511 chrX 4827971 4828002 chrX 4835342 4835373 Stalker4 8 7367 1.5 5.5 3.5 1.8 7402 chrX 4827971 intergenic not near genes chrX 4831672 intergenic not near genes chrX 4835373 intergenic not near genes chrX_8_4830001 chrX_4830001 RAL-83 1512 chrX 4946581 4946606 chrX 4946660 4946685 15 78 4.0 5.0 4.5 2.7 104 chrX 4946581 intron Ptp4E + chrX 4946633 intron Ptp4E + chrX 4946685 intron Ptp4E + chrX_15_4945001 chrX_4945001 RAL-83 1513 chrX 5096274 5096305 chrX 5103839 5103870 springer 7 7565 1.5 5.5 3.5 1.6 7596 chrX 5096274 intron,intron CG15465 +,rg + chrX 5100072 intron,intron CG15465 +,rg + chrX 5103870 intron,intron CG15465 +,rg + chrX_7_5100001 chrX_5100001 RAL-83 1514 chrX 5159725 5159748 chrX 5159820 5159843 7 95 1.5 1.0 1.2 3.2 118 chrX 5159725 intron,intron CG15465 +,rg + chrX 5159784 intron,intron CG15465 +,rg + chrX 5159843 intron,intron CG15465 +,rg + chrX_7_5155001 chrX_5155001 RAL-83 1515 chrX 5204449 5204480 chrX 5204651 5204683 6 202 2.5 2.0 2.2 1.9 234 chrX 5204449 intron,intron CG15465 +,rg + chrX 5204566 intron,intron CG15465 +,rg + chrX 5204683 intron,intron CG15465 +,rg + chrX_6_5200001 chrX_5200001 RAL-83 1516 chrX 5349275 5349310 chrX 5349352 5349387 7 74 1.0 0.5 0.8 3.9 112 chrX 5349275 intron SK + chrX 5349331 intron SK + chrX 5349387 intron SK + chrX_7_5345001 chrX_5345001 RAL-83 1517 chrX 5512056 5512065 chrX 5512139 5512142 4 81 6.5 0.0 3.2 1.0 86 chrX 5512056 intergenic not near genes chrX 5512099 intergenic not near genes chrX 5512142 intergenic not near genes chrX_4_5510001 chrX_5510001 RAL-83 1518 chrX 5884171 5884187 chrX 5884412 5884428 pogo 5 240 2.0 1.0 1.5 2.0 257 chrX 5884171 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884428 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-83 1519 chrX 6037553 6037579 chrX 6037736 6037762 12 183 5.5 2.0 3.8 2.5 209 chrX 6037553 intron rux - chrX 6037658 intron rux - chrX 6037762 5` UTR rux - chrX_12_6035001 chrX_6035001 RAL-83 1520 chrX 6335212 6335224 chrX 6337722 6337734 Tirant 4 2510 0.5 1.5 1.0 2.0 2522 chrX 6335212 intergenic not near genes chrX 6336473 intergenic not near genes chrX 6337734 intergenic CG3842 + chrX_4_6335001 chrX_6335001 RAL-83 1521 chrX 6335225 6335240 chrX 6337721 6337750 Tirant 5 2505 0.0 1.5 0.8 2.8 2525 chrX 6335225 intergenic not near genes chrX 6336488 intergenic not near genes chrX 6337750 intergenic CG3842 + chrX_5_6335001 chrX_6335001 RAL-83 1522 chrX 6339105 6339115 chrX 6339183 6339191 4 78 5.0 2.0 3.5 0.9 86 chrX 6339105 intron CG3842 + chrX 6339148 intron CG3842 + chrX 6339191 intron CG3842 + chrX_4_6335001 chrX_6335001 RAL-83 1523 chrX 6392877 6392902 chrX 6397632 6397666 Doc 10 4761 3.5 1.0 2.2 3.1 4789 chrX 6392877 intergenic not near genes chrX 6395272 intergenic not near genes chrX 6397666 intergenic not near genes chrX_10_6395001 chrX_6395001 RAL-83 1524 chrX 6562816 6562851 chrX 6571298 6571332 Tirant 9 8481 2.0 1.0 1.5 3.6 8516 chrX 6562816 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571332 intron CG34417 + chrX_9_6565001 chrX_6565001 RAL-83 1525 chrX 6737526 6737550 chrX 6737608 6737620 7 80 1.5 3.5 2.5 2.0 94 chrX 6737526 intron CG3168 - chrX 6737573 intron CG3168 - chrX 6737620 intron CG3168 - chrX_7_6735001 chrX_6735001 RAL-83 1526 chrX 6897579 6897701 chrX 6897657 6897811 6 99 1.0 1.0 1.0 3.0 232 chrX 6897579 intergenic not near genes chrX 6897695 intergenic not near genes chrX 6897811 intergenic not near genes chrX_6_6895001 chrX_6895001 RAL-83 1527 chrX 7023599 7023624 chrX 7030989 7031013 Tabor 5 7387 4.0 0.5 2.2 1.6 7414 chrX 7023599 intron CG12541 - chrX 7027306 intron CG12541 - chrX 7031013 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-83 1528 chrX 7048636 7048661 chrX 7048706 7048739 5 73 3.0 0.5 1.8 1.8 103 chrX 7048636 intron CG12541 - chrX 7048688 intron CG12541 - chrX 7048739 intron CG12541 - chrX_5_7045001 chrX_7045001 RAL-83 1529 chrX 7125243 7125255 chrX 7134402 7134414 roo 6 9159 1.5 3.5 2.5 1.7 9171 chrX 7125243 intergenic not near genes chrX 7129828 intergenic not near genes chrX 7134414 intergenic not near genes chrX_6_7125001 chrX_7125001 RAL-83 1530 chrX 7217939 7217972 chrX 7218030 7218063 6 90 0.0 1.0 0.5 4.0 124 chrX 7217939 intron,intron CG9650 +,CR44357 - chrX 7218001 intron,intron CG9650 +,CR44357 - chrX 7218063 intron,intron CG9650 +,CR44357 - chrX_6_7215001 chrX_7215001 RAL-83 1531 chrX 7261650 7261679 chrX 7262396 7262420 8 742 3.0 2.5 2.8 2.1 770 chrX 7261650 intron CR44357 - chrX 7262035 intron CR44357 - chrX 7262420 intron CR44357 - chrX_8_7260001 chrX_7260001 RAL-83 1532 chrX 7702908 7702932 chrX 7703342 7703371 jockey 7 438 3.5 4.0 3.8 1.5 463 chrX 7702908 intron CHES-1-like - chrX 7703140 intron CHES-1-like - chrX 7703371 intron CHES-1-like - chrX_7_7700001 chrX_7700001 RAL-83 1533 chrX 7784239 7784243 chrX 7784537 7784544 jockey 4 301 7.0 5.0 6.0 0.6 305 chrX 7784239 intergenic not near genes chrX 7784392 intergenic not near genes chrX 7784544 intergenic not near genes chrX_4_7780001 chrX_7780001 RAL-83 1534 chrX 7832443 7832464 chrX 7832532 7832552 5 89 0.5 3.0 1.8 1.8 109 chrX 7832443 intron CG1402 + chrX 7832498 intron CG1402 + chrX 7832552 intron CG1402 + chrX_5_7830001 chrX_7830001 RAL-83 1535 chrX 7844980 7845017 chrX 7847707 7847744 hopper2 8 2727 8.5 7.5 8.0 0.9 2764 chrX 7844980 intergenic not near genes chrX 7846362 intergenic not near genes chrX 7847744 intergenic not near genes chrX_8_7845001 chrX_7845001 RAL-83 1536 chrX 7845725 7845756 chrX 7847216 7847247 hopper2 7 1491 1.0 4.5 2.8 1.8 1522 chrX 7845725 intergenic not near genes chrX 7846486 intergenic not near genes chrX 7847247 intergenic not near genes chrX_7_7845001 chrX_7845001 RAL-83 1537 chrX 8092293 8092323 chrX 8092378 8092408 6 85 2.0 2.0 2.0 2.0 115 chrX 8092293 intron Ubc-E2H - chrX 8092350 intron Ubc-E2H - chrX 8092408 intron Ubc-E2H - chrX_6_8090001 chrX_8090001 RAL-83 1538 chrX 8922326 8922361 chrX 8922760 8922795 jockey 6 433 2.0 3.5 2.8 1.6 469 chrX 8922326 intron rdgA + chrX 8922560 intron rdgA + chrX 8922795 intron rdgA + chrX_6_8920001 chrX_8920001 RAL-83 1539 chrX 9391574 9391592 chrX 9391720 9391736 6 146 1.5 3.0 2.2 1.9 162 chrX 9391574 intron mgl - chrX 9391655 intron mgl - chrX 9391736 intron mgl - chrX_6_9390001 chrX_9390001 RAL-83 1540 chrX 9508133 9508163 chrX 9509650 9509681 jockey 8 1517 0.5 0.5 0.5 5.3 1548 chrX 9508133 intron CG32700 - chrX 9508907 intron CG32700 - chrX 9509681 intron CG32700 - chrX_8_9505001 chrX_9505001 RAL-83 1541 chrX 9575799 9575821 chrX 9576114 9576145 mdg3 8 322 3.5 2.0 2.8 2.1 346 chrX 9575799 intron,exon CG32699 -,CG42395 - chrX 9575972 intron,intron CG32699 -,CG42395 - chrX 9576145 intron,5` UTR CG32699 -,CG42395 - chrX_8_9575001 chrX_9575001 RAL-83 1542 chrX 9632038 9632068 chrX 9632208 9632238 4 170 0.0 0.0 0.0 4.0 200 chrX 9632038 intron l(1)G0232 - chrX 9632138 intron l(1)G0232 - chrX 9632238 intron l(1)G0232 - chrX_4_9630001 chrX_9630001 RAL-83 1543 chrX 9758053 9758079 chrX 9758138 9758162 7 83 1.5 0.0 0.8 3.9 109 chrX 9758053 intergenic not near genes chrX 9758108 intergenic not near genes chrX 9758162 intergenic not near genes chrX_7_9755001 chrX_9755001 RAL-83 1544 chrX 9829773 9829798 chrX 9829989 9830014 8 216 3.0 2.5 2.8 2.1 241 chrX 9829773 intron CG32698 + chrX 9829894 intron CG32698 + chrX 9830014 intron CG32698 + chrX_8_9825001 chrX_9825001 RAL-83 1545 chrX 10196190 10196219 chrX 10196299 10196325 5 107 4.5 3.5 4.0 1.0 135 chrX 10196190 intron CR44894 - chrX 10196258 intron CR44894 - chrX 10196325 intron CR44894 - chrX_5_10195001 chrX_10195001 RAL-83 1546 chrX 10369109 10369117 chrX 10369275 10369284 5 167 3.5 0.0 1.8 1.8 175 chrX 10369109 intron CG17841 + chrX 10369196 intron CG17841 + chrX 10369284 intron CG17841 + chrX_5_10365001 chrX_10365001 RAL-83 1547 chrX 10550856 10550889 chrX 10552323 10552356 hobo 14 1467 2.0 3.5 2.8 3.7 1500 chrX 10550856 intron spri - chrX 10551606 intron spri - chrX 10552356 intron spri - chrX_14_10550001 chrX_10550001 RAL-83 1548 chrX 10694157 10694184 chrX 10694234 10694257 10 75 1.5 2.0 1.8 3.6 100 chrX 10694157 intron X11Lbeta + chrX 10694207 intron X11Lbeta + chrX 10694257 intron X11Lbeta + chrX_10_10690001 chrX_10690001 RAL-83 1549 chrX 10772679 10772693 chrX 10772760 10772771 Tirant 4 78 2.5 2.0 2.2 1.2 92 chrX 10772679 intron CG15211 + chrX 10772725 intron CG15211 + chrX 10772771 intron CG15211 + chrX_4_10770001 chrX_10770001 RAL-83 1550 chrX 11167791 11167811 chrX 11167890 11167910 5 98 5.0 1.5 3.2 1.2 119 chrX 11167791 intergenic antdh - chrX 11167850 intergenic antdh - chrX 11167910 intergenic antdh - chrX_5_11165001 chrX_11165001 RAL-83 1551 chrX 11184268 11184279 chrX 11189328 11189355 flea 5 5073 2.0 3.0 2.5 1.4 5087 chrX 11184268 intergenic not near genes chrX 11186812 intergenic not near genes chrX 11189355 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-83 1552 chrX 11268565 11268592 chrX 11270053 11270085 hopper2 7 1489 4.0 4.0 4.0 1.4 1520 chrX 11268565 intron CG44422 - chrX 11269325 intron CG44422 - chrX 11270085 intron CG44422 - chrX_7_11265001 chrX_11265001 RAL-83 1553 chrX 11291695 11291722 chrX 11291777 11291804 9 77 1.0 1.0 1.0 4.5 109 chrX 11291695 intron CG44422 - chrX 11291750 intron CG44422 - chrX 11291804 intron CG44422 - chrX_9_11290001 chrX_11290001 RAL-83 1554 chrX 11351505 11351532 chrX 11351603 11351631 6 98 4.5 2.0 3.2 1.4 126 chrX 11351505 intron CG1737 + chrX 11351568 intron CG1737 + chrX 11351631 intron CG1737 + chrX_6_11350001 chrX_11350001 RAL-83 1555 chrX 11535041 11535046 chrX 11541511 11541516 Burdock 4 6470 4.0 2.0 3.0 1.0 6475 chrX 11535041 intron Drak + chrX 11538278 intron Drak + chrX 11541516 intron Drak + chrX_4_11535001 chrX_11535001 RAL-83 1556 chrX 11633415 11633439 chrX 11640469 11640493 297 5 7054 3.0 0.5 1.8 1.8 7078 chrX 11633415 intron Ptp10D + chrX 11636954 intron Ptp10D + chrX 11640493 intron Ptp10D + chrX_5_11635001 chrX_11635001 RAL-83 1557 chrX 11664214 11664233 chrX 11664647 11664666 4 433 5.5 3.5 4.5 0.7 452 chrX 11664214 intron Ptp10D + chrX 11664440 intron Ptp10D + chrX 11664666 intron Ptp10D + chrX_4_11660001 chrX_11660001 RAL-83 1558 chrX 12078767 12078795 chrX 12079287 12079309 9 515 1.5 2.5 2.0 3.0 542 chrX 12078767 intron,intron CR43960 +,Ten-a + chrX 12079038 intron,intron CR43960 +,Ten-a + chrX 12079309 intron,intron CR43960 +,Ten-a + chrX_9_12075001 chrX_12075001 RAL-83 1559 chrX 12176739 12176768 chrX 12176815 12176819 13 72 4.0 4.0 4.0 2.6 80 chrX 12176739 intron,3` UTR Ten-a +,CG1924 - chrX 12176779 intron,3` UTR Ten-a +,CG1924 - chrX 12176819 intron,3` UTR Ten-a +,CG1924 - chrX_13_12175001 chrX_12175001 RAL-83 1560 chrX 12347530 12347556 chrX 12347775 12347801 6 244 1.0 2.0 1.5 2.4 271 chrX 12347530 intergenic not near genes chrX 12347666 intergenic not near genes chrX 12347801 intergenic not near genes chrX_6_12345001 chrX_12345001 RAL-83 1561 chrX 12370002 12370029 chrX 12370219 12370246 5 217 3.0 1.0 2.0 1.7 244 chrX 12370002 intergenic not near genes chrX 12370124 intergenic not near genes chrX 12370246 intergenic not near genes chrX_5_12370001 chrX_12370001 RAL-83 1562 chrX 12393350 12393373 chrX 12393440 12393446 5 83 0.5 1.0 0.8 2.8 96 chrX 12393350 intergenic not near genes chrX 12393398 intergenic not near genes chrX 12393446 intergenic not near genes chrX_5_12390001 chrX_12390001 RAL-83 1563 chrX 12752281 12752301 chrX 12752368 12752388 4 87 4.0 2.0 3.0 1.0 107 chrX 12752281 5` UTR CR44619 + chrX 12752334 5` UTR CR44619 + chrX 12752388 5` UTR CR44619 + chrX_4_12750001 chrX_12750001 RAL-83 1564 chrX 12971689 12971717 chrX 12971766 12971778 7 73 3.0 3.5 3.2 1.7 89 chrX 12971689 intron,exon CR43636 -,CG15721 + chrX 12971734 intron,exon CR43636 -,CG15721 + chrX 12971778 intron,exon CR43636 -,CG15721 + chrX_7_12970001 chrX_12970001 RAL-83 1565 chrX 13006576 13006597 chrX 13006673 13006694 7 97 2.5 5.5 4.0 1.4 118 chrX 13006576 intron rad + chrX 13006635 intron rad + chrX 13006694 intron rad + chrX_7_13005001 chrX_13005001 RAL-83 1566 chrX 13061362 13061375 chrX 13061473 13061486 5 109 3.0 6.0 4.5 0.9 124 chrX 13061362 intron rad + chrX 13061424 intron rad + chrX 13061486 intron rad + chrX_5_13060001 chrX_13060001 RAL-83 1567 chrX 13146600 13146627 chrX 13146688 13146714 11 88 0.0 0.5 0.2 9.2 114 chrX 13146600 intron CG32645 + chrX 13146657 intron CG32645 + chrX 13146714 intron CG32645 + chrX_11_13145001 chrX_13145001 RAL-83 1568 chrX 13172350 13172376 chrX 13172426 13172452 8 76 3.0 0.5 1.8 2.9 102 chrX 13172350 exon CG34411 - chrX 13172401 intron CG34411 - chrX 13172452 intron CG34411 - chrX_8_13170001 chrX_13170001 RAL-83 1569 chrX 13429469 13429493 chrX 13430618 13430642 jockey 9 1148 0.0 3.0 1.5 3.6 1173 chrX 13429469 intergenic not near genes chrX 13430056 intergenic not near genes chrX 13430642 intergenic not near genes chrX_9_13430001 chrX_13430001 RAL-83 1570 chrX 14014000 14014023 chrX 14014083 14014106 4 83 1.0 0.5 0.8 2.2 106 chrX 14014000 intergenic not near genes chrX 14014053 intergenic not near genes chrX 14014106 intergenic not near genes chrX_4_14010001 chrX_14010001 RAL-83 1571 chrX 14105030 14105042 chrX 14114181 14114193 roo 4 9151 4.0 4.0 4.0 0.8 9163 chrX 14105030 intergenic not near genes chrX 14109612 intergenic not near genes chrX 14114193 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-83 1572 chrX 14131493 14131523 chrX 14131568 14131604 9 70 2.0 3.0 2.5 2.6 111 chrX 14131493 intergenic not near genes chrX 14131548 intergenic not near genes chrX 14131604 intergenic not near genes chrX_9_14130001 chrX_14130001 RAL-83 1573 chrX 14157592 14157616 chrX 14163249 14163257 297 6 5654 0.0 2.5 1.2 2.7 5665 chrX 14157592 intergenic not near genes chrX 14160424 intergenic not near genes chrX 14163257 intergenic not near genes chrX_6_14160001 chrX_14160001 RAL-83 1574 chrX 14484975 14484995 chrX 14485056 14485084 7 88 0.0 1.5 0.8 3.9 109 chrX 14484975 intergenic not near genes chrX 14485030 intergenic not near genes chrX 14485084 intergenic not near genes chrX_7_14485001 chrX_14485001 RAL-83 1575 chrX 14593801 14593822 chrX 14593883 14593904 4 82 1.5 1.5 1.5 1.6 103 chrX 14593801 intron CG9413 - chrX 14593852 intron CG9413 - chrX 14593904 intron CG9413 - chrX_4_14590001 chrX_14590001 RAL-83 1576 chrX 14636461 14636483 chrX 14641902 14641908 I-element 9 5439 5.0 5.5 5.2 1.5 5447 chrX 14636461 intron NetA - chrX 14639184 intron NetA - chrX 14641908 intron NetA - chrX_9_14635001 chrX_14635001 RAL-83 1577 chrX 14636486 14636493 chrX 14641900 14641905 I-element 4 5422 3.5 5.5 4.5 0.7 5419 chrX 14636486 intron NetA - chrX 14639196 intron NetA - chrX 14641905 intron NetA - chrX_4_14635001 chrX_14635001 RAL-83 1578 chrX 14698230 14698262 chrX 14698348 14698379 8 114 3.5 1.5 2.5 2.3 149 chrX 14698230 intron NetB - chrX 14698304 intron NetB - chrX 14698379 intron NetB - chrX_8_14695001 chrX_14695001 RAL-83 1579 chrX 14778031 14778064 chrX 14782828 14782842 Doc 6 4794 2.0 3.0 2.5 1.7 4811 chrX 14778031 intergenic CG5347 + chrX 14780436 intergenic not near genes chrX 14782842 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-83 1580 chrX 14806759 14806776 chrX 14806847 14806864 4 88 2.0 0.0 1.0 2.0 105 chrX 14806759 intron rut - chrX 14806812 intron rut - chrX 14806864 intron rut - chrX_4_14805001 chrX_14805001 RAL-83 1581 chrX 14868463 14868495 chrX 14868586 14868599 9 117 0.0 2.5 1.2 4.1 136 chrX 14868463 intron,intron Flo2 +,CG9518 - chrX 14868531 intron,intron Flo2 +,CG9518 - chrX 14868599 intron,intron Flo2 +,CG9518 - chrX_9_14865001 chrX_14865001 RAL-83 1582 chrX 14936857 14936886 chrX 14946114 14946143 roo 7 9257 1.0 4.0 2.5 2.0 9286 chrX 14936857 intron pdgy - chrX 14941500 intron pdgy - chrX 14946143 intron pdgy - chrX_7_14940001 chrX_14940001 RAL-83 1583 chrX 15413053 15413079 chrX 15417349 15417370 Juan 6 4298 3.5 5.0 4.2 1.2 4317 chrX 15413053 intron Cngl - chrX 15415212 intron Cngl - chrX 15417370 intron Cngl - chrX_6_15415001 chrX_15415001 RAL-83 1584 chrX 15435689 15435697 chrX 15436121 15436130 rover 4 433 4.0 6.0 5.0 0.7 441 chrX 15435689 intron Cngl - chrX 15435910 intron Cngl - chrX 15436130 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-83 1585 chrX 15528546 15528565 chrX 15528624 15528643 7 78 1.5 5.5 3.5 1.6 97 chrX 15528546 intron Ac13E - chrX 15528594 intron Ac13E - chrX 15528643 intron Ac13E - chrX_7_15525001 chrX_15525001 RAL-83 1586 chrX 15705087 15705102 chrX 15705800 15705815 5 714 15.0 5.5 10.2 0.4 728 chrX 15705087 exon CG8134 + chrX 15705451 3` UTR CG8134 + chrX 15705815 3` UTR CG9281 - chrX_5_15705001 chrX_15705001 RAL-83 1587 chrX 16492657 16492676 chrX 16498234 16498252 mdg3 9 5577 2.0 3.0 2.5 2.6 5595 chrX 16492657 intron para - chrX 16495454 intron para - chrX 16498252 intron para - chrX_9_16495001 chrX_16495001 RAL-83 1588 chrX 16529428 16529439 chrX 16529539 16529550 6 111 0.0 3.0 1.5 2.4 122 chrX 16529428 intron para - chrX 16529489 intron para - chrX 16529550 intron para - chrX_6_16525001 chrX_16525001 RAL-83 1589 chrX 16650933 16650957 chrX 16651010 16651034 4 77 0.0 0.0 0.0 4.0 101 chrX 16650933 intergenic CG32573 +,CG42512 + chrX 16650984 intergenic CG32573 +,CG42512 + chrX 16651034 intergenic CG32573 +,CG42512 + chrX_4_16650001 chrX_16650001 RAL-83 1590 chrX 16689621 16689647 chrX 16689707 16689732 5 85 3.5 2.5 3.0 1.2 111 chrX 16689621 intron Sep4 - chrX 16689676 intron Sep4 - chrX 16689732 intron Sep4 - chrX_5_16685001 chrX_16685001 RAL-83 1591 chrX 16833206 16833220 chrX 16833291 16833304 4 85 2.5 4.0 3.2 1.0 98 chrX 16833206 intron CG13004 - chrX 16833255 intron CG13004 - chrX 16833304 intron CG13004 - chrX_4_16830001 chrX_16830001 RAL-83 1592 chrX 16905962 16905976 chrX 16906104 16906124 5 147 4.0 5.0 4.5 0.9 162 chrX 16905962 3` UTR CR44754 - chrX 16906043 3` UTR CR44754 - chrX 16906124 3` UTR CR44754 - chrX_5_16905001 chrX_16905001 RAL-83 1593 chrX 16906649 16906678 chrX 16906736 16906763 6 87 2.0 3.0 2.5 1.7 114 chrX 16906649 intron CR44754 - chrX 16906706 intron CR44754 - chrX 16906763 intron CR44754 - chrX_6_16905001 chrX_16905001 RAL-83 1594 chrX 17011970 17011999 chrX 17012053 17012074 7 76 1.0 4.0 2.5 2.0 104 chrX 17011970 intron CG45002 - chrX 17012022 intron CG45002 - chrX 17012074 intron CG45002 - chrX_7_17010001 chrX_17010001 RAL-83 1595 chrX 17434432 17434443 chrX 17434525 17434536 4 93 1.5 0.0 0.8 2.2 104 chrX 17434432 intron CG12994 - chrX 17434484 intron CG12994 - chrX 17434536 intron CG12994 - chrX_4_17430001 chrX_17430001 RAL-83 1596 chrX 17492049 17492071 chrX 17492382 17492404 6 332 1.5 5.5 3.5 1.3 355 chrX 17492049 intron CG43658 - chrX 17492226 intron CG43658 - chrX 17492404 intron CG43658 - chrX_6_17490001 chrX_17490001 RAL-83 1597 chrX 17502351 17502372 chrX 17502431 17502452 7 80 1.5 2.0 1.8 2.5 101 chrX 17502351 intron CG43658 - chrX 17502402 intron CG43658 - chrX 17502452 intron CG43658 - chrX_7_17500001 chrX_17500001 RAL-83 1598 chrX 17556942 17556966 chrX 17557441 17557447 mdg1 6 491 3.0 3.5 3.2 1.4 505 chrX 17556942 intron CG43658 - chrX 17557194 intron CG43658 - chrX 17557447 intron CG43658 - chrX_6_17555001 chrX_17555001 RAL-83 1599 chrX 17680893 17680907 chrX 17680968 17680984 4 76 6.0 4.0 5.0 0.7 91 chrX 17680893 intron chas - chrX 17680938 intron chas - chrX 17680984 intron chas - chrX_4_17680001 chrX_17680001 RAL-83 1600 chrX 17680908 17680912 chrX 17680966 17680989 4 71 5.5 3.0 4.2 0.8 81 chrX 17680908 intron chas - chrX 17680948 intron chas - chrX 17680989 intron chas - chrX_4_17680001 chrX_17680001 RAL-83 1601 chrX 17740371 17740406 chrX 17740448 17740463 6 68 0.5 2.5 1.5 2.4 92 chrX 17740371 intron CG42684 + chrX 17740417 intron CG42684 + chrX 17740463 intron CG42684 + chrX_6_17740001 chrX_17740001 RAL-83 1602 chrX 17792980 17792984 chrX 17796268 17796280 flea 5 3294 0.0 8.0 4.0 1.0 3300 chrX 17792980 intron OdsH + chrX 17794630 intron OdsH + chrX 17796280 intron OdsH + chrX_5_17790001 chrX_17790001 RAL-83 1603 chrX 17911858 17911877 chrX 17911945 17911964 4 87 1.0 1.0 1.0 2.0 106 chrX 17911858 intron CG6847 + chrX 17911911 intron CG6847 + chrX 17911964 intron CG6847 + chrX_4_17910001 chrX_17910001 RAL-83 1604 chrX 18194073 18194101 chrX 18194608 18194636 BS 6 534 2.5 2.5 2.5 1.7 563 chrX 18194073 intron Frq2 + chrX 18194354 intron Frq2 + chrX 18194636 intron Frq2 + chrX_6_18190001 chrX_18190001 RAL-83 1605 chrX 18412103 18412124 chrX 18412455 18412476 4 350 1.0 3.5 2.2 1.2 373 chrX 18412103 intergenic not near genes chrX 18412290 intergenic not near genes chrX 18412476 intergenic not near genes chrX_4_18410001 chrX_18410001 RAL-83 1606 chrX 18429494 18429527 chrX 18434805 18434838 Transpac 6 5311 3.0 2.0 2.5 1.7 5344 chrX 18429494 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434838 intergenic not near genes chrX_6_18430001 chrX_18430001 RAL-83 1607 chrX 18467225 18467255 chrX 18467389 18467419 11 162 2.0 1.0 1.5 4.4 194 chrX 18467225 intron CG32547 - chrX 18467322 intron CG32547 - chrX 18467419 intron CG32547 - chrX_11_18465001 chrX_18465001 RAL-83 1608 chrX 18512008 18512032 chrX 18512095 18512117 8 88 2.5 1.5 2.0 2.7 109 chrX 18512008 intron Ggt-1 - chrX 18512062 5` UTR Ggt-1 - chrX 18512117 5` UTR Ggt-1 - chrX_8_18510001 chrX_18510001 RAL-83 1609 chrX 18645019 18645048 chrX 18645117 18645146 8 98 1.5 3.5 2.5 2.3 127 chrX 18645019 intron Rip11 - chrX 18645082 intron Rip11 - chrX 18645146 intron Rip11 - chrX_8_18645001 chrX_18645001 RAL-83 1610 chrX 18774451 18774466 chrX 18774536 18774551 6 85 6.5 0.0 3.2 1.4 100 chrX 18774451 intergenic CCKLR-17D3 - chrX 18774501 intergenic CCKLR-17D3 - chrX 18774551 intergenic not near genes chrX_6_18770001 chrX_18770001 RAL-83 1611 chrX 19014359 19014393 chrX 19014438 19014452 11 73 3.0 6.5 4.8 1.9 93 chrX 19014359 intron CG43759 + chrX 19014406 intron CG43759 + chrX 19014452 intron CG43759 + chrX_11_19010001 chrX_19010001 RAL-83 1612 chrX 19019938 19019967 chrX 19020076 19020094 4 130 3.0 1.5 2.2 1.2 156 chrX 19019938 intron CG43759 + chrX 19020016 intron CG43759 + chrX 19020094 intron CG43759 + chrX_4_19020001 chrX_19020001 RAL-83 1613 chrX 19036440 19036449 chrX 19036515 19036524 4 76 0.0 0.0 0.0 4.0 84 chrX 19036440 intergenic not near genes chrX 19036482 intergenic not near genes chrX 19036524 intergenic not near genes chrX_4_19035001 chrX_19035001 RAL-83 1614 chrX 19060410 19060422 chrX 19065194 19065206 Doc 4 4784 3.5 1.0 2.2 1.2 4796 chrX 19060410 intron CG14190 + chrX 19062808 intron CG14190 + chrX 19065206 intron CG14190 + chrX_4_19060001 chrX_19060001 RAL-83 1615 chrX 19136553 19136585 chrX 19143473 19143504 412 7 6920 1.0 1.5 1.2 3.2 6951 chrX 19136553 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143504 3` UTR RhoGAP18B - chrX_7_19140001 chrX_19140001 RAL-83 1616 chrX 19162671 19162700 chrX 19162750 19162783 8 83 1.5 2.0 1.8 2.9 112 chrX 19162671 intron RhoGAP18B - chrX 19162727 intron RhoGAP18B - chrX 19162783 intron RhoGAP18B - chrX_8_19160001 chrX_19160001 RAL-83 1617 chrX 19170592 19170601 chrX 19170669 19170676 5 75 9.0 6.5 7.8 0.6 84 chrX 19170592 5` UTR Inx5 - chrX 19170634 5` UTR Inx5 - chrX 19170676 5` UTR Inx5 - chrX_5_19170001 chrX_19170001 RAL-83 1618 chrX 19173776 19173794 chrX 19173859 19173862 5 79 2.5 2.0 2.2 1.6 86 chrX 19173776 intron pncr004:X - chrX 19173819 intron pncr004:X - chrX 19173862 intron pncr004:X - chrX_5_19170001 chrX_19170001 RAL-83 1619 chrX 13057298 13057299 chrX 19242813 19242813 4 6185514 2.5 1.5 2.0 1.3 6185515 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242813 intergenic not near genes chrX_4_16150001 chrX_16150001 RAL-83 1620 chrX 19356989 19357017 chrX 19358430 19358458 NOF 4 1441 2.5 0.0 1.2 1.8 1469 chrX 19356989 intron kek5 + chrX 19357724 intron kek5 + chrX 19358458 intron kek5 + chrX_4_19355001 chrX_19355001 RAL-83 1621 chrX 19380168 19380181 chrX 19380409 19380421 pogo 5 239 4.0 5.0 4.5 0.9 253 chrX 19380168 intron kek5 + chrX 19380294 intron kek5 + chrX 19380421 intron kek5 + chrX_5_19380001 chrX_19380001 RAL-83 1622 chrX 19472133 19472141 chrX 19472702 19472711 jockey 5 570 3.5 8.0 5.8 0.7 578 chrX 19472133 intergenic kek5 + chrX 19472422 intergenic not near genes chrX 19472711 intergenic not near genes chrX_5_19470001 chrX_19470001 RAL-83 1623 chrX 19500564 19500750 chrX 19500641 19500837 10 84 0.0 1.5 0.8 5.6 273 chrX 19500564 intron,intron CG14200 +,Pfrx + chrX 19500700 intron,intron CG14200 +,Pfrx + chrX 19500837 intron,intron CG14200 +,Pfrx + chrX_10_19500001 chrX_19500001 RAL-83 1624 chrX 19710077 19710103 chrX 19711863 19711889 S-element 8 1786 2.0 5.5 3.8 1.7 1812 chrX 19710077 intron meso18E - chrX 19710983 intron meso18E - chrX 19711889 intron meso18E - chrX_8_19710001 chrX_19710001 RAL-83 1625 chrX 19897386 19897413 chrX 19897463 19897490 4 77 2.0 3.0 2.5 1.1 104 chrX 19897386 intron Hers + chrX 19897438 intron Hers + chrX 19897490 intron Hers + chrX_4_19895001 chrX_19895001 RAL-83 1626 chrX 19983871 19983892 chrX 19983950 19983972 4 80 1.0 2.0 1.5 1.6 101 chrX 19983871 intergenic not near genes chrX 19983922 intergenic not near genes chrX 19983972 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-83 1627 chrX 20041531 20041564 chrX 20041611 20041644 8 78 2.0 2.0 2.0 2.7 113 chrX 20041531 intron Dop2R - chrX 20041588 intron Dop2R - chrX 20041644 intron Dop2R - chrX_8_20040001 chrX_20040001 RAL-83 1628 chrX 20069263 20069289 chrX 20069396 20069422 6 131 3.5 0.5 2.0 2.0 159 chrX 20069263 intergenic not near genes chrX 20069342 intergenic not near genes chrX 20069422 intergenic not near genes chrX_6_20065001 chrX_20065001 RAL-83 1629 chrX 20127841 20127872 chrX 20127925 20127956 7 84 1.5 1.5 1.5 2.8 115 chrX 20127841 intergenic not near genes chrX 20127898 intergenic not near genes chrX 20127956 intergenic not near genes chrX_7_20125001 chrX_20125001 RAL-83 1630 chrX 20312883 20312910 chrX 20312961 20312986 7 76 3.0 3.0 3.0 1.8 103 chrX 20312883 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20312986 intron CG1504 - chrX_7_20310001 chrX_20310001 RAL-83 1631 chrX 20374104 20374125 chrX 20374180 20374198 8 73 2.0 1.0 1.5 3.2 94 chrX 20374104 intergenic not near genes chrX 20374151 intergenic not near genes chrX 20374198 intergenic not near genes chrX_8_20370001 chrX_20370001 RAL-83 1632 chrX 20377329 20377334 chrX 20378796 20378800 hobo 4 1467 4.5 4.0 4.2 0.8 1471 chrX 20377329 intergenic not near genes chrX 20378064 intergenic not near genes chrX 20378800 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-83 1633 chrX 20504140 20504152 chrX 20505661 20505672 transib2 5 1520 1.0 7.0 4.0 1.0 1532 chrX 20504140 intron RhoGAP19D - chrX 20504906 intron RhoGAP19D - chrX 20505672 intron RhoGAP19D - chrX_5_20500001 chrX_20500001 RAL-83 1634 chrX 20603058 20603085 chrX 20603386 20603414 5 324 1.5 3.0 2.2 1.6 356 chrX 20603058 intron RunxA - chrX 20603236 intron RunxA - chrX 20603414 intron RunxA - chrX_5_20600001 chrX_20600001 RAL-83 1635 chrX 20763574 20763597 chrX 20763669 20763694 6 96 2.0 4.0 3.0 1.5 120 chrX 20763574 3` UTR shakB - chrX 20763634 3` UTR shakB - chrX 20763694 3` UTR shakB - chrX_6_20760001 chrX_20760001 RAL-83 1636 chrX 20915043 20915074 chrX 20915214 20915245 7 169 1.5 2.5 2.0 2.3 202 chrX 20915043 intron shakB - chrX 20915144 intron shakB - chrX 20915245 intron shakB - chrX_7_20915001 chrX_20915001 RAL-83 1637 chrX 20940720 20940733 chrX 20942187 20942188 hobo 5 1466 9.5 5.5 7.5 0.6 1468 chrX 20940720 intergenic not near genes chrX 20941454 intergenic not near genes chrX 20942188 intergenic not near genes chrX_5_20940001 chrX_20940001 RAL-83 1638 chrX 20940734 20940756 chrX 20942186 20942225 hobo 8 1465 5.0 5.5 5.2 1.3 1491 chrX 20940734 intergenic not near genes chrX 20941480 intergenic not near genes chrX 20942225 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-83 1639 chrX 20981030 20981059 chrX 20981133 20981162 5 103 0.5 2.5 1.5 2.0 132 chrX 20981030 intergenic not near genes chrX 20981096 intergenic not near genes chrX 20981162 intergenic not near genes chrX_5_20980001 chrX_20980001 RAL-83 1640 chrX 21040463 21040485 chrX 21045381 21045403 6 4918 25.5 28.0 26.8 0.2 4940 chrX 21040463 3` UTR,5` UTR Ntf-2 +,CG15449 - chrX 21042933 intron Mgstl + chrX 21045403 intron Cbs + chrX_6_21040001 chrX_21040001 RAL-83 1641 chrX 21088047 21088073 chrX 21088179 21088205 5 132 2.0 1.5 1.8 1.8 158 chrX 21088047 intergenic not near genes chrX 21088126 intergenic not near genes chrX 21088205 intergenic not near genes chrX_5_21085001 chrX_21085001 RAL-83 1642 chrX 21221302 21221319 chrX 21221432 21221449 6 129 6.0 1.5 3.8 1.2 147 chrX 21221302 intron CG32521 - chrX 21221376 intron CG32521 - chrX 21221449 intron CG32521 - chrX_6_21220001 chrX_21220001 RAL-83 1643 chrX 21325344 21325373 chrX 21328762 21328776 5 3407 10.5 17.0 13.8 0.3 3432 chrX 21325344 exon CG1486 + chrX 21327060 exon CG1486 + chrX 21328776 3` UTR tty - chrX_5_21325001 chrX_21325001 RAL-83 1644 chrX 21410484 21410503 chrX 21410566 21410584 5 82 2.0 0.0 1.0 2.5 100 chrX 21410484 3` UTR CR45003 - chrX 21410534 3` UTR CR45003 - chrX 21410584 intergenic CR45003 - chrX_5_21410001 chrX_21410001 RAL-83 1645 chrX 22478891 22478897 chrX 22479024 22479030 4 133 1.5 4.0 2.8 1.1 139 chrX 22478891 intron CG12576 - chrX 22478960 intron CG12576 - chrX 22479030 intron CG12576 - chrX_4_22475001 chrX_22475001 RAL-83 1646 chrX 22665795 22665827 chrX 22665874 22665905 8 76 0.5 1.5 1.0 4.0 110 chrX 22665795 intron CR44997 + chrX 22665850 intron CR44997 + chrX 22665905 intron CR44997 + chrX_8_22665001 chrX_22665001 RAL-83 1647 chrX 22677295 22677327 chrX 22677504 22677535 9 207 1.5 1.5 1.5 3.6 240 chrX 22677295 intron CR44997 + chrX 22677415 intron CR44997 + chrX 22677535 intron CR44997 + chrX_9_22675001 chrX_22675001 RAL-83 1648 chrX 22867978 22868010 chrX 22868090 22868118 7 108 1.0 0.0 0.5 4.7 140 chrX 22867978 exon CG42346 + chrX 22868048 intron CG42346 + chrX 22868118 intron CG42346 + chrX_7_22865001 chrX_22865001 RAL-83 1649 chrX 22922527 22922550 chrX 22922606 22922630 5 75 1.0 2.0 1.5 2.0 103 chrX 22922527 intergenic not near genes chrX 22922578 intergenic not near genes chrX 22922630 intergenic not near genes chrX_5_22920001 chrX_22920001 RAL-83 1650 chrX 22987112 22987135 chrX 22989771 22989794 Burdock 4 2654 2.0 0.0 1.0 2.0 2682 chrX 22987112 intron,intron stnA -,stnB - chrX 22988453 intron,intron stnA -,stnB - chrX 22989794 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-83 1651 chrX 22992405 22992419 chrX 22992536 22992550 6 130 3.0 5.5 4.2 1.2 145 chrX 22992405 intron,intron stnA -,stnB - chrX 22992478 intron,intron stnA -,stnB - chrX 22992550 intron,intron stnA -,stnB - chrX_6_22990001 chrX_22990001 RAL-83 1652 chrY 975618 975818 chrY 975730 975898 13 90 171.5 159.0 165.2 0.1 280 chrY 975618 intergenic not near genes chrY 975758 intergenic not near genes chrY 975898 intergenic not near genes chrY_13_975001 chrY_975001 RAL-83