SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47439 47486 chr2L 52564 52610 jockey 11 5121 4.5 6.0 5.2 1.8 5171 chr2L 47439 intron Cda5 - chr2L 50024 intron Cda5 - chr2L 52610 intron Cda5 - chr2L_11_50001 chr2L_50001 RAL-837 2 chr2L 91174 91208 chr2L 91249 91304 12 91 4.0 4.0 4.0 2.4 130 chr2L 91174 intergenic not near genes chr2L 91239 intergenic not near genes chr2L 91304 intergenic not near genes chr2L_12_90001 chr2L_90001 RAL-837 3 chr2L 145626 145648 chr2L 145707 145754 10 96 3.5 6.0 4.8 1.7 128 chr2L 145626 intron,exon CG11455 +,CG42399 - chr2L 145690 intron,exon CG11455 +,CG42399 - chr2L 145754 intron,exon CG11455 +,CG42399 - chr2L_10_145001 chr2L_145001 RAL-837 4 chr2L 171460 171467 chr2L 171516 171567 5 85 2.5 2.5 2.5 1.4 107 chr2L 171460 intron spen + chr2L 171514 intron spen + chr2L 171567 intron spen + chr2L_5_170001 chr2L_170001 RAL-837 5 chr2L 172028 172040 chr2L 172146 172170 6 125 1.5 3.5 2.5 1.7 142 chr2L 172028 intron spen + chr2L 172099 intron spen + chr2L 172170 intron spen + chr2L_6_170001 chr2L_170001 RAL-837 6 chr2L 177404 177449 chr2L 177502 177547 12 94 2.0 4.0 3.0 3.0 143 chr2L 177404 intron spen + chr2L 177476 intron spen + chr2L 177547 intron spen + chr2L_12_175001 chr2L_175001 RAL-837 7 chr2L 209829 209876 chr2L 209958 210005 12 118 3.0 3.5 3.2 2.9 176 chr2L 209829 exon Tbc1d15-17 + chr2L 209917 3` UTR Tbc1d15-17 + chr2L 210005 3` UTR Tbc1d15-17 + chr2L_12_205001 chr2L_205001 RAL-837 8 chr2L 218888 218930 chr2L 218985 219029 12 92 1.0 2.5 1.8 4.3 141 chr2L 218888 intron kis - chr2L 218958 intron kis - chr2L 219029 intron kis - chr2L_12_215001 chr2L_215001 RAL-837 9 chr2L 263281 263307 chr2L 263447 263473 6 166 3.0 3.0 3.0 1.5 192 chr2L 263281 intron,3` UTR CG3645 -,CG17075 - chr2L 263377 intron,3` UTR CG3645 -,CG17075 - chr2L 263473 intron,3` UTR CG3645 -,CG17075 - chr2L_6_260001 chr2L_260001 RAL-837 10 chr2L 277769 277808 chr2L 277861 277905 10 93 4.5 4.0 4.2 1.9 136 chr2L 277769 5` UTR,5` UTR CG17078 -,smo + chr2L 277837 5` UTR,exon CG17078 -,smo + chr2L 277905 5` UTR,intron CG17078 -,smo + chr2L_10_275001 chr2L_275001 RAL-837 11 chr2L 325138 325151 chr2L 325203 325247 5 82 8.0 6.5 7.2 0.6 109 chr2L 325138 intron Plc21C + chr2L 325192 intron Plc21C + chr2L 325247 intron Plc21C + chr2L_5_325001 chr2L_325001 RAL-837 12 chr2L 347865 347919 chr2L 355385 355414 blood 15 7513 4.5 3.0 3.8 3.1 7549 chr2L 347865 3` UTR Plc21C + chr2L 351640 intron Plc21C + chr2L 355414 3` UTR Plc21C + chr2L_15_350001 chr2L_350001 RAL-837 13 chr2L 371428 371459 chr2L 371527 371554 4 98 1.5 3.5 2.5 1.1 126 chr2L 371428 intergenic not near genes chr2L 371491 intergenic not near genes chr2L 371554 intergenic not near genes chr2L_4_370001 chr2L_370001 RAL-837 14 chr2L 488402 488428 chr2L 488490 488526 8 95 8.0 3.0 5.5 1.2 124 chr2L 488402 intron ush + chr2L 488464 intron ush + chr2L 488526 intron ush + chr2L_8_485001 chr2L_485001 RAL-837 15 chr2L 528423 528439 chr2L 528528 528544 5 105 5.5 3.5 4.5 0.9 121 chr2L 528423 intron ush + chr2L 528484 intron ush + chr2L 528544 intron ush + chr2L_5_525001 chr2L_525001 RAL-837 16 chr2L 528448 528454 chr2L 528553 528559 4 105 4.5 7.0 5.8 0.6 111 chr2L 528448 intron ush + chr2L 528504 intron ush + chr2L 528559 intron ush + chr2L_4_525001 chr2L_525001 RAL-837 17 chr2L 528458 528464 chr2L 528541 528569 6 101 3.5 6.0 4.8 1.0 111 chr2L 528458 intron ush + chr2L 528514 intron ush + chr2L 528569 intron ush + chr2L_6_525001 chr2L_525001 RAL-837 18 chr2L 580117 580140 chr2L 580218 580241 6 101 6.5 2.5 4.5 1.1 124 chr2L 580117 intergenic not near genes chr2L 580179 intergenic not near genes chr2L 580241 intergenic not near genes chr2L_6_580001 chr2L_580001 RAL-837 19 chr2L 590318 590332 chr2L 590430 590441 4 111 2.5 1.5 2.0 1.3 123 chr2L 590318 intron Gsc - chr2L 590380 intron Gsc - chr2L 590441 intron Gsc - chr2L_4_590001 chr2L_590001 RAL-837 20 chr2L 686917 686943 chr2L 695957 696003 roo 8 9052 3.5 4.5 4.0 1.6 9086 chr2L 686917 intron ds - chr2L 691460 intron ds - chr2L 696003 intron ds - chr2L_8_690001 chr2L_690001 RAL-837 21 chr2L 727165 727196 chr2L 727240 727250 14 85 5.0 4.0 4.5 2.5 85 chr2L 727165 intergenic not near genes chr2L 727208 intergenic not near genes chr2L 727250 intergenic not near genes chr2L_14_725001 chr2L_725001 RAL-837 22 chr2L 747604 747630 chr2L 747704 747730 8 100 2.0 3.5 2.8 2.1 126 chr2L 747604 intergenic not near genes chr2L 747667 intergenic not near genes chr2L 747730 intergenic not near genes chr2L_8_745001 chr2L_745001 RAL-837 23 chr2L 764553 764585 chr2L 764644 764676 13 98 3.0 1.0 2.0 4.3 123 chr2L 764553 intergenic not near genes chr2L 764614 intergenic not near genes chr2L 764676 intergenic not near genes chr2L_13_760001 chr2L_760001 RAL-837 24 chr2L 770443 770488 chr2L 772244 772246 Bari1 12 1792 3.5 3.5 3.5 2.7 1803 chr2L 770443 intergenic not near genes chr2L 771344 intergenic not near genes chr2L 772246 intergenic CR44614 + chr2L_12_770001 chr2L_770001 RAL-837 25 chr2L 848616 848634 chr2L 848700 848701 5 89 6.0 4.0 5.0 0.8 85 chr2L 848616 intron drongo - chr2L 848658 intron drongo - chr2L 848701 intron drongo - chr2L_5_845001 chr2L_845001 RAL-837 26 chr2L 922462 922495 chr2L 922544 922596 5 97 4.0 6.0 5.0 0.8 134 chr2L 922462 intergenic CG4341 + chr2L 922529 intergenic CG4341 + chr2L 922596 intergenic CG4341 + chr2L_5_920001 chr2L_920001 RAL-837 27 chr2L 936317 936534 chr2L 936417 936682 5 108 2.5 1.5 2.0 1.7 365 chr2L 936317 intron CG4341 + chr2L 936500 intron CG4341 + chr2L 936682 intron CG4341 + chr2L_5_935001 chr2L_935001 RAL-837 28 chr2L 964536 964572 chr2L 964640 964676 13 103 4.0 3.5 3.8 2.7 140 chr2L 964536 intergenic not near genes chr2L 964606 intergenic not near genes chr2L 964676 intergenic not near genes chr2L_13_960001 chr2L_960001 RAL-837 29 chr2L 976859 976906 chr2L 984513 984541 roo 10 7648 3.5 1.0 2.2 3.1 7682 chr2L 976859 intergenic not near genes chr2L 980700 intergenic not near genes chr2L 984541 intergenic not near genes chr2L_10_980001 chr2L_980001 RAL-837 30 chr2L 996703 996718 chr2L 1005818 1005833 roo 4 9115 3.5 3.5 3.5 0.9 9130 chr2L 996703 intergenic not near genes chr2L 1001268 intergenic not near genes chr2L 1005833 intergenic not near genes chr2L_4_1000001 chr2L_1000001 RAL-837 31 chr2L 1025102 1025114 chr2L 1025205 1025217 5 103 6.0 4.5 5.2 0.8 115 chr2L 1025102 intron IA-2 - chr2L 1025160 intron IA-2 - chr2L 1025217 intron IA-2 - chr2L_5_1025001 chr2L_1025001 RAL-837 32 chr2L 1038597 1038641 chr2L 1038695 1038715 13 95 3.0 4.0 3.5 2.9 118 chr2L 1038597 intron,3` UTR IA-2 -,CG4415 + chr2L 1038656 intron,3` UTR IA-2 -,CG4415 + chr2L 1038715 intron IA-2 - chr2L_13_1035001 chr2L_1035001 RAL-837 33 chr2L 1042583 1042605 chr2L 1042694 1042696 7 108 0.0 0.0 0.0 7.0 113 chr2L 1042583 intron IA-2 - chr2L 1042640 intron IA-2 - chr2L 1042696 intron IA-2 - chr2L_7_1040001 chr2L_1040001 RAL-837 34 chr2L 1192661 1192682 chr2L 1192784 1192803 4 122 5.5 2.5 4.0 0.8 142 chr2L 1192661 intron CG5001 + chr2L 1192732 intron CG5001 + chr2L 1192803 intron CG5001 + chr2L_4_1190001 chr2L_1190001 RAL-837 35 chr2L 1192684 1192697 chr2L 1192783 1192820 7 118 2.5 2.5 2.5 2.0 136 chr2L 1192684 intron CG5001 + chr2L 1192752 intron CG5001 + chr2L 1192820 intron CG5001 + chr2L_7_1190001 chr2L_1190001 RAL-837 36 chr2L 1220112 1220161 chr2L 1227598 1227647 blood 13 7481 3.0 5.0 4.0 2.6 7535 chr2L 1220112 intron CG42329 + chr2L 1223880 intron CG42329 + chr2L 1227647 intron CG42329 + chr2L_13_1220001 chr2L_1220001 RAL-837 37 chr2L 1261209 1261249 chr2L 1261310 1261339 10 100 4.5 3.0 3.8 2.1 130 chr2L 1261209 intron robo3 + chr2L 1261274 intron robo3 + chr2L 1261339 intron robo3 + chr2L_10_1260001 chr2L_1260001 RAL-837 38 chr2L 1300723 1300766 chr2L 1300823 1300858 15 102 1.0 2.5 1.8 5.4 135 chr2L 1300723 intergenic not near genes chr2L 1300790 intergenic not near genes chr2L 1300858 intergenic not near genes chr2L_15_1300001 chr2L_1300001 RAL-837 39 chr2L 1301749 1301781 chr2L 1302306 1302340 gypsy 6 556 0.5 5.5 3.0 1.5 591 chr2L 1301749 intergenic not near genes chr2L 1302044 intergenic not near genes chr2L 1302340 intergenic not near genes chr2L_6_1300001 chr2L_1300001 RAL-837 40 chr2L 1312855 1312901 chr2L 1312961 1313008 6 100 1.0 4.5 2.8 1.6 153 chr2L 1312855 intergenic not near genes chr2L 1312932 intergenic not near genes chr2L 1313008 intergenic not near genes chr2L_6_1310001 chr2L_1310001 RAL-837 41 chr2L 1399084 1399098 chr2L 1399207 1399221 5 121 5.5 2.0 3.8 1.0 137 chr2L 1399084 intron lea - chr2L 1399152 intron lea - chr2L 1399221 intron lea - chr2L_5_1395001 chr2L_1395001 RAL-837 42 chr2L 1459830 1459861 chr2L 1459956 1459987 6 126 7.0 1.0 4.0 1.2 157 chr2L 1459830 intergenic not near genes chr2L 1459908 intergenic not near genes chr2L 1459987 intergenic not near genes chr2L_6_1455001 chr2L_1455001 RAL-837 43 chr2L 1511968 1512003 chr2L 1512086 1512121 7 116 5.5 6.0 5.8 1.0 153 chr2L 1511968 intergenic not near genes chr2L 1512044 intergenic not near genes chr2L 1512121 intergenic not near genes chr2L_7_1510001 chr2L_1510001 RAL-837 44 chr2L 1539832 1539876 chr2L 1539945 1539989 10 110 3.0 4.0 3.5 2.2 157 chr2L 1539832 intergenic not near genes chr2L 1539910 intergenic not near genes chr2L 1539989 intergenic not near genes chr2L_10_1535001 chr2L_1535001 RAL-837 45 chr2L 1570669 1570704 chr2L 1573561 1573586 F-element 9 2891 4.5 4.5 4.5 1.6 2917 chr2L 1570669 intron haf + chr2L 1572128 intron haf + chr2L 1573586 intron haf + chr2L_9_1570001 chr2L_1570001 RAL-837 46 chr2L 1591871 1591893 chr2L 1591949 1591990 8 95 1.5 2.0 1.8 2.9 119 chr2L 1591871 intron haf + chr2L 1591930 intron haf + chr2L 1591990 intron haf + chr2L_8_1590001 chr2L_1590001 RAL-837 47 chr2L 1615381 1615408 chr2L 1615483 1615493 9 97 0.5 4.0 2.2 2.8 112 chr2L 1615381 intergenic not near genes chr2L 1615437 intergenic not near genes chr2L 1615493 intergenic not near genes chr2L_9_1615001 chr2L_1615001 RAL-837 48 chr2L 1620267 1620293 chr2L 1620363 1620386 6 95 0.0 8.5 4.2 1.2 119 chr2L 1620267 3` UTR CR44603 - chr2L 1620326 3` UTR CR44603 - chr2L 1620386 3` UTR CR44603 - chr2L_6_1620001 chr2L_1620001 RAL-837 49 chr2L 1678956 1679009 chr2L 1686441 1686473 blood 10 7476 2.5 3.5 3.0 2.5 7517 chr2L 1678956 intron chinmo + chr2L 1682714 intron chinmo + chr2L 1686473 intron chinmo + chr2L_10_1680001 chr2L_1680001 RAL-837 50 chr2L 1692090 1692105 chr2L 1692173 1692196 4 94 2.5 2.5 2.5 1.1 106 chr2L 1692090 intron chinmo + chr2L 1692143 intron chinmo + chr2L 1692196 intron chinmo + chr2L_4_1690001 chr2L_1690001 RAL-837 51 chr2L 1711339 1711356 chr2L 1711683 1711700 mdg3 6 344 8.0 6.0 7.0 0.8 361 chr2L 1711339 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711520 3` UTR frtz - chr2L 1711700 3` UTR frtz - chr2L_6_1710001 chr2L_1710001 RAL-837 52 chr2L 1711362 1711386 chr2L 1711682 1711729 mdg3 6 330 5.5 6.0 5.8 0.9 367 chr2L 1711362 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711546 3` UTR frtz - chr2L 1711729 3` UTR frtz - chr2L_6_1710001 chr2L_1710001 RAL-837 53 chr2L 1756779 1756823 chr2L 1756926 1756960 6 142 4.5 2.0 3.2 1.4 181 chr2L 1756779 intergenic Gr22f - chr2L 1756870 intergenic Gr22f - chr2L 1756960 intergenic not near genes chr2L_6_1755001 chr2L_1755001 RAL-837 54 chr2L 1757306 1757357 chr2L 1757405 1757456 19 94 5.0 4.5 4.8 3.3 150 chr2L 1757306 intergenic not near genes chr2L 1757381 intergenic not near genes chr2L 1757456 intergenic not near genes chr2L_19_1755001 chr2L_1755001 RAL-837 55 chr2L 1761997 1762021 chr2L 1762096 1762115 11 101 3.5 2.5 3.0 2.8 118 chr2L 1761997 intergenic not near genes chr2L 1762056 intergenic not near genes chr2L 1762115 intergenic not near genes chr2L_11_1760001 chr2L_1760001 RAL-837 56 chr2L 1795443 1795641 chr2L 1795551 1795747 31 107 2.0 4.0 3.0 7.8 304 chr2L 1795443 intergenic not near genes chr2L 1795595 intergenic not near genes chr2L 1795747 intergenic not near genes chr2L_31_1795001 chr2L_1795001 RAL-837 57 chr2L 1879500 1879539 chr2L 1879610 1879658 12 119 1.5 3.0 2.2 3.8 158 chr2L 1879500 intron CG31663 - chr2L 1879579 intron CG31663 - chr2L 1879658 intron CG31663 - chr2L_12_1875001 chr2L_1875001 RAL-837 58 chr2L 1883345 1883385 chr2L 1883494 1883534 9 146 4.0 5.5 4.8 1.6 189 chr2L 1883345 intron CG15358 - chr2L 1883440 intron CG15358 - chr2L 1883534 intron CG15358 - chr2L_9_1880001 chr2L_1880001 RAL-837 59 chr2L 1901487 1901527 chr2L 1901584 1901624 6 95 3.5 11.0 7.2 0.7 137 chr2L 1901487 intron CG7337 + chr2L 1901556 intron CG7337 + chr2L 1901624 intron CG7337 + chr2L_6_1900001 chr2L_1900001 RAL-837 60 chr2L 1905072 1905111 chr2L 1905195 1905234 11 122 6.5 6.5 6.5 1.5 162 chr2L 1905072 intron CG7337 + chr2L 1905153 intron CG7337 + chr2L 1905234 intron CG7337 + chr2L_11_1905001 chr2L_1905001 RAL-837 61 chr2L 2046311 2046354 chr2L 2046407 2046438 12 92 1.5 2.0 1.8 4.3 127 chr2L 2046311 intron Kebab + chr2L 2046374 intron Kebab + chr2L 2046438 exon Kebab + chr2L_12_2045001 chr2L_2045001 RAL-837 62 chr2L 2100378 2100401 chr2L 2109524 2109572 roo 5 9161 2.5 3.0 2.8 1.3 9194 chr2L 2100378 intron dpr3 - chr2L 2104975 intron dpr3 - chr2L 2109572 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-837 63 chr2L 2112113 2112137 chr2L 2119774 2119779 opus 7 7667 1.0 2.0 1.5 2.8 7666 chr2L 2112113 intergenic not near genes chr2L 2115946 intergenic not near genes chr2L 2119779 intergenic not near genes chr2L_7_2115001 chr2L_2115001 RAL-837 64 chr2L 2207669 2207697 chr2L 2207770 2207783 5 98 4.5 6.5 5.5 0.8 114 chr2L 2207669 exon CG33124 - chr2L 2207726 exon CG33124 - chr2L 2207783 exon CG33124 - chr2L_5_2205001 chr2L_2205001 RAL-837 65 chr2L 2250403 2250440 chr2L 2251190 2251211 4 777 5.5 0.5 3.0 1.0 808 chr2L 2250403 intergenic Ser12 - chr2L 2250807 exon Ser12 - chr2L 2251211 exon Ser12 - chr2L_4_2250001 chr2L_2250001 RAL-837 66 chr2L 2290613 2290615 chr2L 2290658 2290666 5 60 0.5 5.0 2.8 1.3 53 chr2L 2290613 exon robl22E - chr2L 2290640 5` UTR robl22E - chr2L 2290666 intron robl22E - chr2L_5_2290001 chr2L_2290001 RAL-837 67 chr2L 2294024 2294071 chr2L 2299244 2299259 copia 4 5214 3.5 1.5 2.5 1.1 5235 chr2L 2294024 intergenic not near genes chr2L 2296642 intergenic not near genes chr2L 2299259 intergenic not near genes chr2L_4_2295001 chr2L_2295001 RAL-837 68 chr2L 2311058 2311079 chr2L 2311169 2311184 6 113 1.5 0.0 0.8 3.3 126 chr2L 2311058 intron CG9967 - chr2L 2311121 intron CG9967 - chr2L 2311184 intron CG9967 - chr2L_6_2310001 chr2L_2310001 RAL-837 69 chr2L 2330854 2330900 chr2L 2330963 2331009 10 104 1.5 2.5 2.0 3.3 155 chr2L 2330854 intron,intron CG9967 -,eys + chr2L 2330932 intron,intron CG9967 -,eys + chr2L 2331009 intron,intron CG9967 -,eys + chr2L_10_2330001 chr2L_2330001 RAL-837 70 chr2L 2427359 2427393 chr2L 2427465 2427499 6 99 3.5 1.0 2.2 1.9 140 chr2L 2427359 3` UTR CR44912 - chr2L 2427429 3` UTR CR44912 - chr2L 2427499 3` UTR CR44912 - chr2L_6_2425001 chr2L_2425001 RAL-837 71 chr2L 2504206 2504228 chr2L 2504304 2504326 5 98 2.5 6.5 4.5 0.9 120 chr2L 2504206 intergenic not near genes chr2L 2504266 intergenic not near genes chr2L 2504326 intergenic not near genes chr2L_5_2500001 chr2L_2500001 RAL-837 72 chr2L 2541470 2541478 chr2L 2541543 2541554 6 86 2.5 5.0 3.8 1.2 84 chr2L 2541470 intergenic not near genes chr2L 2541512 intergenic not near genes chr2L 2541554 intergenic not near genes chr2L_6_2540001 chr2L_2540001 RAL-837 73 chr2L 2552725 2552768 chr2L 2552825 2552843 5 93 4.0 6.0 5.0 0.8 118 chr2L 2552725 exon CG3515 - chr2L 2552784 5` UTR CG3515 - chr2L 2552843 intergenic CG3515 - chr2L_5_2550001 chr2L_2550001 RAL-837 74 chr2L 2565540 2565564 chr2L 2571627 2571654 297 6 6091 6.0 7.5 6.8 0.8 6114 chr2L 2565540 exon Cyp309a2 - chr2L 2568597 intron Cyp309a2 - chr2L 2571654 exon Cyp309a2 - chr2L_6_2565001 chr2L_2565001 RAL-837 75 chr2L 2637235 2637245 chr2L 2637338 2637343 4 104 4.5 6.5 5.5 0.6 108 chr2L 2637235 intergenic not near genes chr2L 2637289 intergenic not near genes chr2L 2637343 intergenic not near genes chr2L_4_2635001 chr2L_2635001 RAL-837 76 chr2L 2661199 2661215 chr2L 2663046 2663073 I-element 6 1855 5.0 7.5 6.2 0.8 1874 chr2L 2661199 intergenic not near genes chr2L 2662136 intergenic not near genes chr2L 2663073 intergenic not near genes chr2L_6_2660001 chr2L_2660001 RAL-837 77 chr2L 2661221 2661234 chr2L 2663039 2663066 I-element 5 1826 3.0 5.0 4.0 1.0 1845 chr2L 2661221 intergenic not near genes chr2L 2662144 intergenic not near genes chr2L 2663066 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-837 78 chr2L 2667606 2667658 chr2L 2667705 2667756 10 89 3.5 2.0 2.8 2.6 150 chr2L 2667606 intergenic not near genes chr2L 2667681 intergenic not near genes chr2L 2667756 intergenic not near genes chr2L_10_2665001 chr2L_2665001 RAL-837 79 chr2L 2678647 2678690 chr2L 2678751 2678794 12 96 1.5 2.0 1.8 4.3 147 chr2L 2678647 intron CG31690 + chr2L 2678720 intron CG31690 + chr2L 2678794 intron CG31690 + chr2L_12_2675001 chr2L_2675001 RAL-837 80 chr2L 2803982 2804017 chr2L 2804079 2804114 6 94 4.5 5.5 5.0 1.0 132 chr2L 2803982 intergenic not near genes chr2L 2804048 intergenic not near genes chr2L 2804114 intergenic not near genes chr2L_6_2800001 chr2L_2800001 RAL-837 81 chr2L 2873435 2873466 chr2L 2873518 2873559 4 82 0.0 5.0 2.5 1.1 124 chr2L 2873435 intron CG31694 - chr2L 2873497 intron CG31694 - chr2L 2873559 intron CG31694 - chr2L_4_2870001 chr2L_2870001 RAL-837 82 chr2L 2885371 2885382 chr2L 2885462 2885479 7 94 4.0 6.0 5.0 1.2 108 chr2L 2885371 intron NTPase - chr2L 2885425 intron NTPase - chr2L 2885479 intron NTPase - chr2L_7_2885001 chr2L_2885001 RAL-837 83 chr2L 2885383 2885396 chr2L 2885454 2885493 4 87 2.5 4.5 3.5 0.9 110 chr2L 2885383 intron NTPase - chr2L 2885438 intron NTPase - chr2L 2885493 intron NTPase - chr2L_4_2885001 chr2L_2885001 RAL-837 84 chr2L 2933273 2933314 chr2L 2935478 2935521 pogo 7 2202 2.5 4.0 3.2 1.7 2248 chr2L 2933273 intron lilli + chr2L 2934397 intron lilli + chr2L 2935521 intron lilli + chr2L_7_2930001 chr2L_2930001 RAL-837 85 chr2L 2937406 2937413 chr2L 2937503 2937505 4 96 8.0 0.5 4.2 0.8 99 chr2L 2937406 intron lilli + chr2L 2937456 intron lilli + chr2L 2937505 intron lilli + chr2L_4_2935001 chr2L_2935001 RAL-837 86 chr2L 3001580 3001633 chr2L 3001683 3001693 10 95 2.5 2.5 2.5 2.9 113 chr2L 3001580 intron CG17265 + chr2L 3001636 intron CG17265 + chr2L 3001693 intron CG17265 + chr2L_10_3000001 chr2L_3000001 RAL-837 87 chr2L 3016125 3016154 chr2L 3016218 3016252 8 91 5.5 5.0 5.2 1.3 127 chr2L 3016125 intergenic CG17265 +,CG17224 - chr2L 3016188 intergenic CG17265 +,CG17224 - chr2L 3016252 intergenic CG17265 +,CG17224 - chr2L_8_3015001 chr2L_3015001 RAL-837 88 chr2L 3046411 3046455 chr2L 3046579 3046630 4 173 7.0 0.0 3.5 0.9 219 chr2L 3046411 intron v(2)k05816 + chr2L 3046520 intron v(2)k05816 + chr2L 3046630 intron v(2)k05816 + chr2L_4_3045001 chr2L_3045001 RAL-837 89 chr2L 3049219 3049236 chr2L 3049325 3049342 10 105 13.0 5.0 9.0 1.0 123 chr2L 3049219 intron v(2)k05816 + chr2L 3049280 intron v(2)k05816 + chr2L 3049342 intron v(2)k05816 + chr2L_10_3045001 chr2L_3045001 RAL-837 90 chr2L 3049238 3049266 chr2L 3049319 3049342 14 98 4.0 4.5 4.2 2.7 104 chr2L 3049238 intron v(2)k05816 + chr2L 3049290 intron v(2)k05816 + chr2L 3049342 intron v(2)k05816 + chr2L_14_3045001 chr2L_3045001 RAL-837 91 chr2L 3072966 3072992 chr2L 3078235 3078240 copia 5 5261 2.0 4.0 3.0 1.2 5274 chr2L 3072966 intron toc - chr2L 3075603 intron toc - chr2L 3078240 intron toc - chr2L_5_3075001 chr2L_3075001 RAL-837 92 chr2L 3181275 3181306 chr2L 3181381 3181412 8 105 3.5 4.0 3.8 1.7 137 chr2L 3181275 intron CG34393 - chr2L 3181344 intron CG34393 - chr2L 3181412 intron CG34393 - chr2L_8_3180001 chr2L_3180001 RAL-837 93 chr2L 3201102 3201148 chr2L 3201200 3201229 14 95 4.5 6.5 5.5 2.2 127 chr2L 3201102 intergenic not near genes chr2L 3201166 intergenic not near genes chr2L 3201229 intergenic not near genes chr2L_14_3200001 chr2L_3200001 RAL-837 94 chr2L 3251476 3251516 chr2L 3259061 3259075 springer 14 7579 5.0 6.0 5.5 2.2 7599 chr2L 3251476 intergenic not near genes chr2L 3255276 intergenic not near genes chr2L 3259075 intergenic not near genes chr2L_14_3255001 chr2L_3255001 RAL-837 95 chr2L 3275189 3275207 chr2L 3275299 3275316 4 110 4.0 5.5 4.8 0.7 127 chr2L 3275189 intergenic not near genes chr2L 3275252 intergenic not near genes chr2L 3275316 intergenic CG3332 - chr2L_4_3275001 chr2L_3275001 RAL-837 96 chr2L 3291222 3291270 chr2L 3291322 3291370 13 96 3.5 4.5 4.0 2.6 148 chr2L 3291222 intergenic CG9664 - chr2L 3291296 3` UTR CG9664 - chr2L 3291370 3` UTR CG9664 - chr2L_13_3290001 chr2L_3290001 RAL-837 97 chr2L 3367000 3367042 chr2L 3367164 3367212 10 165 3.5 2.5 3.0 2.5 212 chr2L 3367000 intron CG34394 - chr2L 3367106 intron CG34394 - chr2L 3367212 intron CG34394 - chr2L_10_3365001 chr2L_3365001 RAL-837 98 chr2L 3388580 3388628 chr2L 3388841 3388889 pogo 15 254 3.5 1.5 2.5 4.3 309 chr2L 3388580 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388889 intergenic CG42460 -,CR44791 + chr2L_15_3385001 chr2L_3385001 RAL-837 99 chr2L 3392357 3392378 chr2L 3392545 3392566 5 184 7.0 2.0 4.5 0.9 209 chr2L 3392357 intergenic not near genes chr2L 3392462 intergenic not near genes chr2L 3392566 intergenic not near genes chr2L_5_3390001 chr2L_3390001 RAL-837 100 chr2L 3426396 3426440 chr2L 3426529 3426571 12 128 5.0 5.0 5.0 2.0 175 chr2L 3426396 intron pgant2 - chr2L 3426484 intron pgant2 - chr2L 3426571 5` UTR pgant2 - chr2L_12_3425001 chr2L_3425001 RAL-837 101 chr2L 3467508 3467559 chr2L 3467633 3467700 5 125 1.5 0.0 0.8 2.8 192 chr2L 3467508 3` UTR CG3238 - chr2L 3467604 3` UTR CG3238 - chr2L 3467700 3` UTR CG3238 - chr2L_5_3465001 chr2L_3465001 RAL-837 102 chr2L 3498699 3498723 chr2L 3498796 3498807 9 96 3.0 6.5 4.8 1.6 108 chr2L 3498699 intron tim - chr2L 3498753 intron tim - chr2L 3498807 intron tim - chr2L_9_3495001 chr2L_3495001 RAL-837 103 chr2L 3510384 3510406 chr2L 3510486 3510508 6 100 5.0 6.0 5.5 0.9 124 chr2L 3510384 3` UTR CG33123 - chr2L 3510446 3` UTR CG33123 - chr2L 3510508 3` UTR CG33123 - chr2L_6_3510001 chr2L_3510001 RAL-837 104 chr2L 3649771 3649812 chr2L 3654994 3655035 copia 7 5223 5.0 3.5 4.2 1.3 5264 chr2L 3649771 intron for - chr2L 3652403 intron for - chr2L 3655035 intron for - chr2L_7_3650001 chr2L_3650001 RAL-837 105 chr2L 3663294 3663330 chr2L 3663388 3663429 10 96 8.0 4.0 6.0 1.4 135 chr2L 3663294 5` UTR CG34340 + chr2L 3663362 intron CG34340 + chr2L 3663429 intron CG34340 + chr2L_10_3660001 chr2L_3660001 RAL-837 106 chr2L 3667960 3668064 chr2L 3668061 3668160 11 96 0.0 0.0 0.0 11.0 200 chr2L 3667960 intron CG34340 + chr2L 3668060 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668160 intron,exon CG34340 +,Sfp24Ba - chr2L_11_3665001 chr2L_3665001 RAL-837 107 chr2L 3690105 3690115 chr2L 3690211 3690223 4 108 12.0 7.5 9.8 0.4 118 chr2L 3690105 intron CG34340 + chr2L 3690164 intron CG34340 + chr2L 3690223 intron CG34340 + chr2L_4_3690001 chr2L_3690001 RAL-837 108 chr2L 3735808 3735847 chr2L 3736036 3736075 9 226 3.5 3.0 3.2 2.1 267 chr2L 3735808 intron CG10019 + chr2L 3735942 intron CG10019 + chr2L 3736075 intron CG10019 + chr2L_9_3735001 chr2L_3735001 RAL-837 109 chr2L 3819614 3819630 chr2L 3819710 3819726 5 95 2.0 6.5 4.2 1.0 112 chr2L 3819614 intergenic not near genes chr2L 3819670 intergenic not near genes chr2L 3819726 intergenic not near genes chr2L_5_3815001 chr2L_3815001 RAL-837 110 chr2L 3936620 3936649 chr2L 3936703 3936749 5 97 4.0 0.0 2.0 1.7 129 chr2L 3936620 intron fred - chr2L 3936684 intron fred - chr2L 3936749 intron fred - chr2L_5_3935001 chr2L_3935001 RAL-837 111 chr2L 3943773 3943820 chr2L 3943884 3943931 13 108 2.5 3.0 2.8 3.4 158 chr2L 3943773 intron fred - chr2L 3943852 intron fred - chr2L 3943931 intron fred - chr2L_13_3940001 chr2L_3940001 RAL-837 112 chr2L 3981816 3981857 chr2L 3981958 3982010 8 137 3.0 0.0 1.5 3.2 194 chr2L 3981816 intron fred - chr2L 3981913 intron fred - chr2L 3982010 intron fred - chr2L_8_3980001 chr2L_3980001 RAL-837 113 chr2L 3985965 3985980 chr2L 3986063 3986078 10 97 3.0 4.0 3.5 2.2 113 chr2L 3985965 intron fred - chr2L 3986022 intron fred - chr2L 3986078 intron fred - chr2L_10_3985001 chr2L_3985001 RAL-837 114 chr2L 3997528 3997580 chr2L 3997639 3997688 6 95 0.0 3.5 1.8 2.1 160 chr2L 3997528 intergenic not near genes chr2L 3997608 intergenic not near genes chr2L 3997688 intergenic not near genes chr2L_6_3995001 chr2L_3995001 RAL-837 115 chr2L 4037801 4037808 chr2L 4037889 4037915 4 102 5.5 2.0 3.8 0.8 114 chr2L 4037801 intron ed + chr2L 4037858 intron ed + chr2L 4037915 intron ed + chr2L_4_4035001 chr2L_4035001 RAL-837 116 chr2L 4060160 4060198 chr2L 4060256 4060278 10 93 1.0 4.5 2.8 2.6 118 chr2L 4060160 intron ed + chr2L 4060219 intron ed + chr2L 4060278 intron ed + chr2L_10_4060001 chr2L_4060001 RAL-837 117 chr2L 4092409 4092425 chr2L 4092506 4092522 4 97 4.0 9.0 6.5 0.5 113 chr2L 4092409 intron ed + chr2L 4092466 intron ed + chr2L 4092522 intron ed + chr2L_4_4090001 chr2L_4090001 RAL-837 118 chr2L 4119952 4119966 chr2L 4120059 4120073 5 107 1.5 4.5 3.0 1.2 121 chr2L 4119952 intergenic Sr-CIII + chr2L 4120012 intergenic Sr-CIII + chr2L 4120073 intergenic Sr-CIII + chr2L_5_4120001 chr2L_4120001 RAL-837 119 chr2L 4166371 4166374 chr2L 4166464 4166477 5 96 7.0 5.5 6.2 0.7 106 chr2L 4166371 intergenic Or24a - chr2L 4166424 intergenic Or24a - chr2L 4166477 intergenic Or24a - chr2L_5_4165001 chr2L_4165001 RAL-837 120 chr2L 4166384 4166408 chr2L 4166460 4166511 9 99 1.5 5.0 3.2 2.1 127 chr2L 4166384 intergenic Or24a - chr2L 4166448 intergenic Or24a - chr2L 4166511 intergenic Or24a - chr2L_9_4165001 chr2L_4165001 RAL-837 121 chr2L 4184456 4184506 chr2L 4184795 4184845 5 337 0.5 4.5 2.5 1.4 389 chr2L 4184456 intergenic not near genes chr2L 4184650 intergenic not near genes chr2L 4184845 intergenic not near genes chr2L_5_4180001 chr2L_4180001 RAL-837 122 chr2L 4229595 4229644 chr2L 4229717 4229735 15 107 2.0 2.0 2.0 5.0 140 chr2L 4229595 intergenic CR44608 + chr2L 4229665 intergenic CR44608 + chr2L 4229735 intergenic CR44608 + chr2L_15_4225001 chr2L_4225001 RAL-837 123 chr2L 4345491 4345517 chr2L 4345569 4345615 4 77 3.5 5.0 4.2 0.8 124 chr2L 4345491 3` UTR Atet + chr2L 4345553 3` UTR Atet + chr2L 4345615 3` UTR Atet + chr2L_4_4345001 chr2L_4345001 RAL-837 124 chr2L 4351466 4351499 chr2L 4351562 4351595 8 94 2.5 7.0 4.8 1.4 129 chr2L 4351466 intergenic CR44700 + chr2L 4351530 intergenic CR44700 + chr2L 4351595 intergenic CR44700 + chr2L_8_4350001 chr2L_4350001 RAL-837 125 chr2L 4450560 4450573 chr2L 4450647 4450670 4 92 11.0 4.0 7.5 0.5 110 chr2L 4450560 intron CG15439 - chr2L 4450615 intron CG15439 - chr2L 4450670 intron CG15439 - chr2L_4_4450001 chr2L_4450001 RAL-837 126 chr2L 4586958 4586987 chr2L 4587060 4587099 9 105 1.0 5.5 3.2 2.1 141 chr2L 4586958 intron dp - chr2L 4587028 intron dp - chr2L 4587099 intron dp - chr2L_9_4585001 chr2L_4585001 RAL-837 127 chr2L 4595844 4595893 chr2L 4595954 4596003 16 107 4.5 0.5 2.5 4.6 159 chr2L 4595844 intron dp - chr2L 4595924 intron dp - chr2L 4596003 intron dp - chr2L_16_4595001 chr2L_4595001 RAL-837 128 chr2L 4601682 4601732 chr2L 4609143 4609193 mdg1 14 7456 8.0 3.0 5.5 2.2 7511 chr2L 4601682 intron dp - chr2L 4605438 intron dp - chr2L 4609193 intron dp - chr2L_14_4605001 chr2L_4605001 RAL-837 129 chr2L 4613697 4613743 chr2L 4613807 4613853 20 107 3.5 3.5 3.5 4.4 156 chr2L 4613697 intron dp - chr2L 4613775 intron dp - chr2L 4613853 intron dp - chr2L_20_4610001 chr2L_4610001 RAL-837 130 chr2L 4618853 4618895 chr2L 4618971 4619003 4 113 2.5 5.5 4.0 0.8 150 chr2L 4618853 intergenic not near genes chr2L 4618928 intergenic not near genes chr2L 4619003 intergenic not near genes chr2L_4_4615001 chr2L_4615001 RAL-837 131 chr2L 4626317 4626353 chr2L 4626762 4626798 10 442 3.0 3.0 3.0 2.5 481 chr2L 4626317 intergenic not near genes chr2L 4626558 intergenic not near genes chr2L 4626798 intergenic not near genes chr2L_10_4625001 chr2L_4625001 RAL-837 132 chr2L 4630676 4630680 chr2L 4630754 4630794 4 91 2.5 2.0 2.2 1.2 118 chr2L 4630676 intergenic not near genes chr2L 4630735 intergenic not near genes chr2L 4630794 intergenic not near genes chr2L_4_4630001 chr2L_4630001 RAL-837 133 chr2L 4781108 4781139 chr2L 4781238 4781244 7 126 5.0 0.0 2.5 2.0 136 chr2L 4781108 intron CG15630 - chr2L 4781176 intron CG15630 - chr2L 4781244 intron CG15630 - chr2L_7_4780001 chr2L_4780001 RAL-837 134 chr2L 4841061 4841102 chr2L 4841157 4841196 6 91 6.0 6.5 6.2 0.8 135 chr2L 4841061 intron CG12194 + chr2L 4841128 intron CG12194 + chr2L 4841196 3` UTR CG12194 + chr2L_6_4840001 chr2L_4840001 RAL-837 135 chr2L 4858450 4858484 chr2L 4858557 4858592 8 107 1.0 0.0 0.5 5.3 142 chr2L 4858450 intron pog + chr2L 4858521 intron pog + chr2L 4858592 intron pog + chr2L_8_4855001 chr2L_4855001 RAL-837 136 chr2L 4892887 4892893 chr2L 4892990 4892996 4 103 0.0 8.0 4.0 0.8 109 chr2L 4892887 intron CG3036 + chr2L 4892942 intron CG3036 + chr2L 4892996 intron CG3036 + chr2L_4_4890001 chr2L_4890001 RAL-837 137 chr2L 4903847 4903880 chr2L 4903974 4904007 13 123 7.5 4.0 5.8 1.9 160 chr2L 4903847 3` UTR CG3036 + chr2L 4903927 3` UTR CG2837 - chr2L 4904007 3` UTR CG2837 - chr2L_13_4900001 chr2L_4900001 RAL-837 138 chr2L 4918161 4918191 chr2L 4923254 4923322 jockey 4 5102 0.0 0.5 0.2 3.3 5161 chr2L 4918161 intron hoe1 - chr2L 4920742 intron hoe1 - chr2L 4923322 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-837 139 chr2L 4923240 4923254 chr2L 4923336 4923363 5 106 0.5 4.5 2.5 1.4 123 chr2L 4923240 intron hoe1 - chr2L 4923302 intron hoe1 - chr2L 4923363 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-837 140 chr2L 4953499 4953543 chr2L 4953760 4953769 pogo 8 248 1.5 4.5 3.0 2.0 270 chr2L 4953499 intergenic Jon25Bii - chr2L 4953634 intergenic Jon25Bii - chr2L 4953769 intergenic not near genes chr2L_8_4950001 chr2L_4950001 RAL-837 141 chr2L 4996073 4996114 chr2L 4996170 4996211 13 95 2.5 2.0 2.2 4.1 138 chr2L 4996073 intron Rtnl1 - chr2L 4996142 intron Rtnl1 - chr2L 4996211 intron Rtnl1 - chr2L_13_4995001 chr2L_4995001 RAL-837 142 chr2L 4998118 4998142 chr2L 4998226 4998275 5 126 3.5 7.0 5.2 0.8 157 chr2L 4998118 intron Rtnl1 - chr2L 4998196 intron Rtnl1 - chr2L 4998275 intron Rtnl1 - chr2L_5_4995001 chr2L_4995001 RAL-837 143 chr2L 5021702 5021729 chr2L 5021798 5021825 6 95 6.5 5.5 6.0 0.9 123 chr2L 5021702 intron vkg - chr2L 5021764 intron vkg - chr2L 5021825 intron vkg - chr2L_6_5020001 chr2L_5020001 RAL-837 144 chr2L 5037994 5038027 chr2L 5038091 5038130 8 93 4.0 6.5 5.2 1.3 136 chr2L 5037994 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5038062 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5038130 exon,5` UTR CG14042 +,SP555 + chr2L_8_5035001 chr2L_5035001 RAL-837 145 chr2L 5092426 5092439 chr2L 5092511 5092546 6 99 0.0 2.5 1.2 2.7 120 chr2L 5092426 intron pgant5 - chr2L 5092486 intron pgant5 - chr2L 5092546 intron pgant5 - chr2L_6_5090001 chr2L_5090001 RAL-837 146 chr2L 5101280 5101295 chr2L 5101383 5101398 5 103 9.0 5.0 7.0 0.6 118 chr2L 5101280 intron Msp300 + chr2L 5101339 intron Msp300 + chr2L 5101398 intron Msp300 + chr2L_5_5100001 chr2L_5100001 RAL-837 147 chr2L 5101297 5101319 chr2L 5101375 5101422 4 84 3.0 3.0 3.0 1.0 125 chr2L 5101297 intron Msp300 + chr2L 5101360 intron Msp300 + chr2L 5101422 intron Msp300 + chr2L_4_5100001 chr2L_5100001 RAL-837 148 chr2L 5240969 5240996 chr2L 5241051 5241092 5 94 0.5 1.0 0.8 2.8 123 chr2L 5240969 intron tkv - chr2L 5241030 intron tkv - chr2L 5241092 intron tkv - chr2L_5_5240001 chr2L_5240001 RAL-837 149 chr2L 5263699 5263741 chr2L 5263801 5263833 12 95 1.5 4.0 2.8 3.2 134 chr2L 5263699 intron tkv - chr2L 5263766 intron tkv - chr2L 5263833 intron tkv - chr2L_12_5260001 chr2L_5260001 RAL-837 150 chr2L 5267900 5267945 chr2L 5271186 5271224 23 3284 56.5 66.0 61.2 0.4 3324 chr2L 5267900 intron,exon tkv -,Cyp4ac2 + chr2L 5269562 intron,exon tkv -,Cyp4ac3 + chr2L 5271224 intron tkv - chr2L_23_5265001 chr2L_5265001 RAL-837 151 chr2L 5276715 5276734 chr2L 5276803 5276838 8 100 3.0 1.5 2.2 2.5 123 chr2L 5276715 exon Bsg25D - chr2L 5276776 intron Bsg25D - chr2L 5276838 intron Bsg25D - chr2L_8_5275001 chr2L_5275001 RAL-837 152 chr2L 5345421 5345452 chr2L 5345517 5345521 6 90 2.0 4.0 3.0 1.5 100 chr2L 5345421 intergenic not near genes chr2L 5345471 intergenic not near genes chr2L 5345521 intergenic not near genes chr2L_6_5345001 chr2L_5345001 RAL-837 153 chr2L 5378411 5378447 chr2L 5378508 5378546 4 98 4.0 3.0 3.5 0.9 135 chr2L 5378411 intergenic not near genes chr2L 5378478 intergenic not near genes chr2L 5378546 intergenic not near genes chr2L_4_5375001 chr2L_5375001 RAL-837 154 chr2L 5475131 5475164 chr2L 5475256 5475277 4 122 1.5 3.0 2.2 1.2 146 chr2L 5475131 intergenic not near genes chr2L 5475204 intergenic not near genes chr2L 5475277 intergenic not near genes chr2L_4_5475001 chr2L_5475001 RAL-837 155 chr2L 5485055 5485078 chr2L 5485129 5485139 8 76 1.0 2.5 1.8 2.9 84 chr2L 5485055 intergenic not near genes chr2L 5485097 intergenic not near genes chr2L 5485139 intergenic not near genes chr2L_8_5485001 chr2L_5485001 RAL-837 156 chr2L 5486256 5486282 chr2L 5486365 5486391 5 101 1.0 0.0 0.5 3.3 135 chr2L 5486256 intergenic not near genes chr2L 5486324 intergenic not near genes chr2L 5486391 intergenic not near genes chr2L_5_5485001 chr2L_5485001 RAL-837 157 chr2L 5500040 5500074 chr2L 5500146 5500166 8 100 2.5 3.5 3.0 2.0 126 chr2L 5500040 intergenic not near genes chr2L 5500103 intergenic not near genes chr2L 5500166 intergenic not near genes chr2L_8_5500001 chr2L_5500001 RAL-837 158 chr2L 5582312 5582335 chr2L 5582422 5582440 5 109 5.5 2.5 4.0 1.0 128 chr2L 5582312 intergenic not near genes chr2L 5582376 intergenic not near genes chr2L 5582440 intergenic not near genes chr2L_5_5580001 chr2L_5580001 RAL-837 159 chr2L 5594330 5594354 chr2L 5594412 5594460 6 103 3.5 0.0 1.8 2.1 130 chr2L 5594330 intergenic not near genes chr2L 5594395 intergenic not near genes chr2L 5594460 intergenic not near genes chr2L_6_5590001 chr2L_5590001 RAL-837 160 chr2L 5666310 5666323 chr2L 5666413 5666428 5 104 3.0 5.0 4.0 1.0 118 chr2L 5666310 intron Hsp60C + chr2L 5666369 intron Hsp60C + chr2L 5666428 intron Hsp60C + chr2L_5_5665001 chr2L_5665001 RAL-837 161 chr2L 5814677 5814714 chr2L 5814775 5814801 11 98 3.0 2.0 2.5 3.1 124 chr2L 5814677 intergenic not near genes chr2L 5814739 intergenic not near genes chr2L 5814801 intergenic not near genes chr2L_11_5810001 chr2L_5810001 RAL-837 162 chr2L 5827694 5827741 chr2L 5836722 5836763 roo 9 9018 5.5 5.0 5.2 1.5 9069 chr2L 5827694 intron TrissinR + chr2L 5832228 intron TrissinR + chr2L 5836763 intron TrissinR + chr2L_9_5830001 chr2L_5830001 RAL-837 163 chr2L 5843832 5843869 chr2L 5843925 5843977 13 103 4.5 3.5 4.0 2.6 145 chr2L 5843832 intron TrissinR + chr2L 5843904 intron TrissinR + chr2L 5843977 intron TrissinR + chr2L_13_5840001 chr2L_5840001 RAL-837 164 chr2L 5870703 5870752 chr2L 5870806 5870831 14 97 2.0 0.5 1.2 6.4 128 chr2L 5870703 intron rau - chr2L 5870767 intron rau - chr2L 5870831 intron rau - chr2L_14_5870001 chr2L_5870001 RAL-837 165 chr2L 5887581 5887633 chr2L 5887682 5887734 15 96 4.5 4.0 4.2 2.9 153 chr2L 5887581 3` UTR CR44577 - chr2L 5887658 3` UTR CR44577 - chr2L 5887734 3` UTR CR44577 - chr2L_15_5885001 chr2L_5885001 RAL-837 166 chr2L 5897572 5897624 chr2L 5897675 5897727 16 100 7.0 5.5 6.2 2.2 155 chr2L 5897572 intergenic not near genes chr2L 5897650 intergenic not near genes chr2L 5897727 intergenic not near genes chr2L_16_5895001 chr2L_5895001 RAL-837 167 chr2L 5904440 5904473 chr2L 5904540 5904548 8 96 2.5 0.5 1.5 3.2 108 chr2L 5904440 exon CG9021 - chr2L 5904494 intron CG9021 - chr2L 5904548 intron CG9021 - chr2L_8_5900001 chr2L_5900001 RAL-837 168 chr2L 5975562 5975611 chr2L 5975667 5975719 16 97 3.0 2.0 2.5 4.6 157 chr2L 5975562 intron chic - chr2L 5975640 intron chic - chr2L 5975719 intron chic - chr2L_16_5975001 chr2L_5975001 RAL-837 169 chr2L 6007100 6007124 chr2L 6007190 6007196 5 87 2.0 1.5 1.8 1.8 96 chr2L 6007100 intergenic CG9098 -,Gal - chr2L 6007148 intergenic CG9098 -,Gal - chr2L 6007196 intergenic CG9098 -,Gal - chr2L_5_6005001 chr2L_6005001 RAL-837 170 chr2L 6018225 6018341 chr2L 6018306 6018484 18 126 0.0 0.0 0.0 18.0 259 chr2L 6018225 intron H2.0 - chr2L 6018354 intron H2.0 - chr2L 6018484 intron H2.0 - chr2L_18_6015001 chr2L_6015001 RAL-837 171 chr2L 6053859 6053884 chr2L 6053955 6053980 10 94 4.5 4.0 4.2 1.9 121 chr2L 6053859 3` UTR CG9135 + chr2L 6053920 intergenic CG9135 +,CG13995 + chr2L 6053980 intergenic CG9135 +,CG13995 + chr2L_10_6050001 chr2L_6050001 RAL-837 172 chr2L 6070898 6070927 chr2L 6070991 6071017 9 102 0.5 1.5 1.0 4.5 119 chr2L 6070898 intergenic Kr-h2 +,CG9154 - chr2L 6070958 intergenic Kr-h2 +,CG9154 - chr2L 6071017 5` UTR Kr-h2 + chr2L_9_6070001 chr2L_6070001 RAL-837 173 chr2L 6080635 6080688 chr2L 6080733 6080742 12 86 4.0 1.0 2.5 3.4 107 chr2L 6080635 intergenic not near genes chr2L 6080688 intergenic not near genes chr2L 6080742 intergenic not near genes chr2L_12_6080001 chr2L_6080001 RAL-837 174 chr2L 6093685 6093717 chr2L 6093775 6093817 10 97 2.5 2.0 2.2 3.1 132 chr2L 6093685 exon,3` UTR Kr-h1 +,CG45075 + chr2L 6093751 intron,intron Kr-h1 +,CG45075 + chr2L 6093817 exon,3` UTR Kr-h1 +,CG45075 + chr2L_10_6090001 chr2L_6090001 RAL-837 175 chr2L 6153673 6153722 chr2L 6153789 6153823 15 113 3.0 5.5 4.2 2.9 150 chr2L 6153673 3` UTR Muc26B + chr2L 6153748 intergenic Muc26B +,CG31639 - chr2L 6153823 intergenic CG31639 -,Muc26B + chr2L_15_6150001 chr2L_6150001 RAL-837 176 chr2L 6283933 6283976 chr2L 6284054 6284107 8 128 2.5 5.5 4.0 1.6 174 chr2L 6283933 intron Ddr + chr2L 6284020 intron Ddr + chr2L 6284107 intron Ddr + chr2L_8_6280001 chr2L_6280001 RAL-837 177 chr2L 6286377 6286419 chr2L 6286492 6286498 7 104 3.0 3.5 3.2 1.7 121 chr2L 6286377 intron Ddr + chr2L 6286438 intron Ddr + chr2L 6286498 intron Ddr + chr2L_7_6285001 chr2L_6285001 RAL-837 178 chr2L 6349107 6349135 chr2L 6349214 6349247 4 108 2.0 1.5 1.8 1.4 140 chr2L 6349107 intergenic CG9498 - chr2L 6349177 intergenic CG9498 - chr2L 6349247 intergenic CG9498 - chr2L_4_6345001 chr2L_6345001 RAL-837 179 chr2L 6363132 6363174 chr2L 6366078 6366120 Burdock 7 2946 5.0 5.5 5.2 1.1 2988 chr2L 6363132 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366120 intergenic not near genes chr2L_7_6360001 chr2L_6360001 RAL-837 180 chr2L 6370228 6370273 chr2L 6370329 6370350 10 92 5.0 5.5 5.2 1.6 122 chr2L 6370228 intergenic CG9505 + chr2L 6370289 intergenic CG9505 + chr2L 6370350 intergenic CG9505 + chr2L_10_6370001 chr2L_6370001 RAL-837 181 chr2L 6373027 6373075 chr2L 6373132 6373180 12 96 5.0 4.5 4.8 2.1 153 chr2L 6373027 intron slam + chr2L 6373104 intron slam + chr2L 6373180 intron slam + chr2L_12_6370001 chr2L_6370001 RAL-837 182 chr2L 6414969 6415014 chr2L 6415080 6415125 11 110 2.0 2.5 2.2 3.4 156 chr2L 6414969 3` UTR CG13982 + chr2L 6415047 3` UTR CG13982 + chr2L 6415125 3` UTR CG13982 + chr2L_11_6415001 chr2L_6415001 RAL-837 183 chr2L 6426843 6426888 chr2L 6445123 6445146 roo 16 18274 2.5 4.5 3.5 3.6 18303 chr2L 6426843 3` UTR CG9527 - chr2L 6435994 intron CG9527 - chr2L 6445146 exon CG9527 - chr2L_16_6435001 chr2L_6435001 RAL-837 184 chr2L 6481526 6481561 chr2L 6481632 6481665 8 104 4.5 3.0 3.8 1.7 139 chr2L 6481526 intron DLP + chr2L 6481596 intron DLP + chr2L 6481665 intron DLP + chr2L_8_6480001 chr2L_6480001 RAL-837 185 chr2L 6492863 6492881 chr2L 6492967 6492985 5 104 6.5 5.0 5.8 0.7 122 chr2L 6492863 intron CG31638 + chr2L 6492924 intron CG31638 + chr2L 6492985 intron,3` UTR CG31638 +,CG9547 - chr2L_5_6490001 chr2L_6490001 RAL-837 186 chr2L 6504968 6504989 chr2L 6505061 6505098 8 105 8.5 4.5 6.5 1.1 130 chr2L 6504968 intron CG31637 + chr2L 6505033 intron CG31637 + chr2L 6505098 intron CG31637 + chr2L_8_6505001 chr2L_6505001 RAL-837 187 chr2L 6526971 6527020 chr2L 6527070 6527113 7 97 3.0 0.0 1.5 2.8 142 chr2L 6526971 3` UTR CG31637 + chr2L 6527042 intergenic CG31637 +,eya - chr2L 6527113 intergenic CG31637 +,eya - chr2L_7_6525001 chr2L_6525001 RAL-837 188 chr2L 6537043 6537054 chr2L 6537147 6537158 4 104 7.5 0.0 3.8 0.8 115 chr2L 6537043 intron eya - chr2L 6537100 intron eya - chr2L 6537158 intron eya - chr2L_4_6535001 chr2L_6535001 RAL-837 189 chr2L 6537069 6537159 chr2L 6537144 6537257 4 92 0.0 0.0 0.0 4.0 188 chr2L 6537069 intron eya - chr2L 6537163 intron eya - chr2L 6537257 intron eya - chr2L_4_6535001 chr2L_6535001 RAL-837 190 chr2L 6564823 6564879 chr2L 6564936 6564991 13 112 5.0 3.5 4.2 2.5 168 chr2L 6564823 3` UTR CG13766 - chr2L 6564907 3` UTR CG13766 - chr2L 6564991 3` UTR CG13766 - chr2L_13_6560001 chr2L_6560001 RAL-837 191 chr2L 6590089 6590124 chr2L 6590175 6590222 12 90 5.5 3.5 4.5 2.2 133 chr2L 6590089 intron CG11319 - chr2L 6590156 intron CG11319 - chr2L 6590222 intron CG11319 - chr2L_12_6590001 chr2L_6590001 RAL-837 192 chr2L 6597251 6597277 chr2L 6597386 6597397 5 131 5.0 1.0 3.0 1.2 146 chr2L 6597251 intron CG11319 - chr2L 6597324 intron CG11319 - chr2L 6597397 intron CG11319 - chr2L_5_6595001 chr2L_6595001 RAL-837 193 chr2L 6655508 6655543 chr2L 6655890 6655925 12 380 21.5 27.5 24.5 0.5 417 chr2L 6655508 exon CG31633 - chr2L 6655716 exon CG31633 - chr2L 6655925 exon CG31633 - chr2L_12_6655001 chr2L_6655001 RAL-837 194 chr2L 6653893 6653905 chr2L 6657611 6657623 5 3718 9.0 21.0 15.0 0.3 3730 chr2L 6653893 exon Tango1 + chr2L 6655758 exon CG31633 - chr2L 6657623 exon CG31636 - chr2L_5_6655001 chr2L_6655001 RAL-837 195 chr2L 6658078 6658098 chr2L 6658173 6658213 8 115 3.5 2.5 3.0 2.0 135 chr2L 6658078 5` UTR CG31636 - chr2L 6658146 5` UTR CG31636 - chr2L 6658213 intergenic CG31636 -,CG11070 + chr2L_8_6655001 chr2L_6655001 RAL-837 196 chr2L 6799573 6799621 chr2L 6799683 6799706 14 107 2.5 2.0 2.2 4.4 133 chr2L 6799573 5` UTR CR43610 + chr2L 6799640 intergenic CR43610 +,CG17376 - chr2L 6799706 intergenic CR43610 +,CG17376 - chr2L_14_6795001 chr2L_6795001 RAL-837 197 chr2L 6868102 6868137 chr2L 6868223 6868253 4 120 5.5 5.5 5.5 0.6 151 chr2L 6868102 intron Nha1 - chr2L 6868178 intron Nha1 - chr2L 6868253 intron Nha1 - chr2L_4_6865001 chr2L_6865001 RAL-837 198 chr2L 6871557 6871608 chr2L 6871667 6871713 8 104 2.0 4.0 3.0 2.0 156 chr2L 6871557 intron CR44915 - chr2L 6871635 intron CR44915 - chr2L 6871713 intron CR44915 - chr2L_8_6870001 chr2L_6870001 RAL-837 199 chr2L 6876767 6876809 chr2L 6882966 6882972 diver 6 6196 4.0 3.5 3.8 1.2 6205 chr2L 6876767 intron Nlg2 + chr2L 6879870 intron Nlg2 + chr2L 6882972 intron Nlg2 + chr2L_6_6875001 chr2L_6875001 RAL-837 200 chr2L 7095584 7095616 chr2L 7095694 7095726 7 110 3.5 1.5 2.5 2.0 142 chr2L 7095584 intergenic not near genes chr2L 7095655 intergenic not near genes chr2L 7095726 intergenic not near genes chr2L_7_7095001 chr2L_7095001 RAL-837 201 chr2L 7107782 7107817 chr2L 7107907 7107943 6 126 3.0 5.5 4.2 1.2 161 chr2L 7107782 intron Pvf3 - chr2L 7107862 intron Pvf3 - chr2L 7107943 intron Pvf3 - chr2L_6_7105001 chr2L_7105001 RAL-837 202 chr2L 7125771 7125792 chr2L 7125907 7125928 4 136 6.5 5.5 6.0 0.6 157 chr2L 7125771 intron Pvf3 - chr2L 7125850 intron Pvf3 - chr2L 7125928 intron Pvf3 - chr2L_4_7125001 chr2L_7125001 RAL-837 203 chr2L 7138079 7138117 chr2L 7138199 7138235 7 120 0.5 3.5 2.0 2.3 156 chr2L 7138079 intron Pvf3 - chr2L 7138157 intron Pvf3 - chr2L 7138235 intron Pvf3 - chr2L_7_7135001 chr2L_7135001 RAL-837 204 chr2L 7167583 7167632 chr2L 7167681 7167725 8 96 5.0 6.5 5.8 1.2 142 chr2L 7167583 intergenic not near genes chr2L 7167654 intergenic not near genes chr2L 7167725 intergenic not near genes chr2L_8_7165001 chr2L_7165001 RAL-837 205 chr2L 7227887 7227941 chr2L 7228011 7228065 16 121 3.5 2.0 2.8 4.2 178 chr2L 7227887 intron,exon Ndae1 -,CG43799 + chr2L 7227976 intron,exon Ndae1 -,CG43799 + chr2L 7228065 intron,exon Ndae1 -,CG43799 + chr2L_16_7225001 chr2L_7225001 RAL-837 206 chr2L 7325914 7325939 chr2L 7326013 7326022 4 95 4.0 2.5 3.2 1.0 108 chr2L 7325914 intergenic not near genes chr2L 7325968 intergenic not near genes chr2L 7326022 intergenic not near genes chr2L_4_7325001 chr2L_7325001 RAL-837 207 chr2L 7343304 7343357 chr2L 7350440 7350490 roo 16 7127 2.5 4.5 3.5 3.6 7186 chr2L 7343304 intron Wnt6 + chr2L 7346897 intron Wnt6 + chr2L 7350490 intron Wnt6 + chr2L_16_7345001 chr2L_7345001 RAL-837 208 chr2L 7404484 7404530 chr2L 7404586 7404637 4 98 1.5 4.5 3.0 1.0 153 chr2L 7404484 3` UTR CG5171 + chr2L 7404560 intergenic CG5171 + chr2L 7404637 intergenic CG5171 + chr2L_4_7400001 chr2L_7400001 RAL-837 209 chr2L 7405755 7405767 chr2L 7405856 7405868 6 101 2.5 0.0 1.2 2.7 113 chr2L 7405755 exon CG5177 + chr2L 7405812 intron CG5177 + chr2L 7405868 intron CG5177 + chr2L_6_7405001 chr2L_7405001 RAL-837 210 chr2L 7436197 7436221 chr2L 7436291 7436335 5 105 2.5 0.5 1.5 2.0 138 chr2L 7436197 intergenic not near genes chr2L 7436266 intergenic not near genes chr2L 7436335 intergenic not near genes chr2L_5_7435001 chr2L_7435001 RAL-837 211 chr2L 7449737 7449772 chr2L 7449834 7449869 14 96 3.0 1.5 2.2 4.4 132 chr2L 7449737 5` UTR santa-maria - chr2L 7449803 5` UTR santa-maria - chr2L 7449869 5` UTR santa-maria - chr2L_14_7445001 chr2L_7445001 RAL-837 212 chr2L 7493389 7493415 chr2L 7493494 7493511 5 104 0.0 2.5 1.2 2.3 122 chr2L 7493389 intron Ziz - chr2L 7493450 intron Ziz - chr2L 7493511 intron Ziz - chr2L_5_7490001 chr2L_7490001 RAL-837 213 chr2L 7502730 7502745 chr2L 7502826 7502839 7 96 5.5 8.5 7.0 0.9 109 chr2L 7502730 intron RapGAP1 - chr2L 7502784 intron RapGAP1 - chr2L 7502839 intron RapGAP1 - chr2L_7_7500001 chr2L_7500001 RAL-837 214 chr2L 7502750 7502769 chr2L 7502814 7502865 8 86 3.0 5.5 4.2 1.5 115 chr2L 7502750 intron RapGAP1 - chr2L 7502808 intron RapGAP1 - chr2L 7502865 intron RapGAP1 - chr2L_8_7500001 chr2L_7500001 RAL-837 215 chr2L 7513758 7513795 chr2L 7513855 7513892 12 92 3.0 5.0 4.0 2.4 134 chr2L 7513758 intron RapGAP1 - chr2L 7513825 intron RapGAP1 - chr2L 7513892 intron RapGAP1 - chr2L_12_7510001 chr2L_7510001 RAL-837 216 chr2L 7579192 7579202 chr2L 7579392 7579413 BS 5 209 5.0 0.5 2.8 1.3 221 chr2L 7579192 intergenic RapGAP1 - chr2L 7579302 intergenic RapGAP1 - chr2L 7579413 intergenic RapGAP1 - chr2L_5_7575001 chr2L_7575001 RAL-837 217 chr2L 7579902 7579921 chr2L 7579977 7580023 8 93 2.0 7.0 4.5 1.5 121 chr2L 7579902 intergenic not near genes chr2L 7579962 intergenic not near genes chr2L 7580023 intergenic not near genes chr2L_8_7575001 chr2L_7575001 RAL-837 218 chr2L 7621806 7621821 chr2L 7621918 7621933 4 110 2.5 4.0 3.2 1.0 127 chr2L 7621806 intergenic not near genes chr2L 7621870 intergenic not near genes chr2L 7621933 intergenic not near genes chr2L_4_7620001 chr2L_7620001 RAL-837 219 chr2L 7650020 7650024 chr2L 7650111 7650120 5 93 6.0 0.0 3.0 1.2 100 chr2L 7650020 intron Slob - chr2L 7650070 intron Slob - chr2L 7650120 intron Slob - chr2L_5_7650001 chr2L_7650001 RAL-837 220 chr2L 7653024 7653067 chr2L 7653138 7653164 6 111 7.0 0.0 3.5 1.3 140 chr2L 7653024 intron Slob - chr2L 7653094 intron Slob - chr2L 7653164 intron Slob - chr2L_6_7650001 chr2L_7650001 RAL-837 221 chr2L 7655717 7655764 chr2L 7655821 7655869 8 103 3.0 1.0 2.0 2.7 152 chr2L 7655717 intron Slob - chr2L 7655793 intron Slob - chr2L 7655869 intron Slob - chr2L_8_7655001 chr2L_7655001 RAL-837 222 chr2L 7664947 7664987 chr2L 7665052 7665077 8 99 1.0 0.0 0.5 5.3 130 chr2L 7664947 intron Slob - chr2L 7665012 intron Slob - chr2L 7665077 intron Slob - chr2L_8_7665001 chr2L_7665001 RAL-837 223 chr2L 7685477 7685517 chr2L 7685575 7685615 9 96 3.0 4.5 3.8 1.9 138 chr2L 7685477 intron Myo28B1 + chr2L 7685546 intron Myo28B1 + chr2L 7685615 intron Myo28B1 + chr2L_9_7685001 chr2L_7685001 RAL-837 224 chr2L 7702878 7702913 chr2L 7703066 7703101 10 186 3.5 4.0 3.8 2.1 223 chr2L 7702878 5` UTR Tep3 + chr2L 7702990 5` UTR Tep3 + chr2L 7703101 5` UTR Tep3 + chr2L_10_7700001 chr2L_7700001 RAL-837 225 chr2L 7769793 7769831 chr2L 7769884 7769930 8 95 4.0 2.0 3.0 2.0 137 chr2L 7769793 intron CG7191 + chr2L 7769862 intron CG7191 + chr2L 7769930 intron CG7191 + chr2L_8_7765001 chr2L_7765001 RAL-837 226 chr2L 7839561 7839578 chr2L 7839682 7839683 4 113 1.5 0.0 0.8 2.2 122 chr2L 7839561 intergenic not near genes chr2L 7839622 intergenic not near genes chr2L 7839683 intergenic not near genes chr2L_4_7835001 chr2L_7835001 RAL-837 227 chr2L 7867568 7867590 chr2L 7867682 7867704 5 114 6.0 3.5 4.8 0.9 136 chr2L 7867568 intron Proc - chr2L 7867636 intron Proc - chr2L 7867704 intron Proc - chr2L_5_7865001 chr2L_7865001 RAL-837 228 chr2L 7921089 7921119 chr2L 7921185 7921194 8 98 3.5 3.5 3.5 1.8 105 chr2L 7921089 intron Snoo - chr2L 7921142 intron Snoo - chr2L 7921194 intron Snoo - chr2L_8_7920001 chr2L_7920001 RAL-837 229 chr2L 7922722 7922771 chr2L 7922823 7922872 16 96 3.5 6.0 4.8 2.8 150 chr2L 7922722 intron Snoo - chr2L 7922797 intron Snoo - chr2L 7922872 intron Snoo - chr2L_16_7920001 chr2L_7920001 RAL-837 230 chr2L 7959028 7959072 chr2L 7960452 7960505 pogo 5 1430 3.5 2.0 2.8 1.3 1477 chr2L 7959028 intron Snoo - chr2L 7959766 intron Snoo - chr2L 7960505 intron Snoo - chr2L_5_7955001 chr2L_7955001 RAL-837 231 chr2L 7977082 7977110 chr2L 7984077 7984105 297 7 6991 4.5 2.5 3.5 1.6 7023 chr2L 7977082 intron Snoo - chr2L 7980594 intron Snoo - chr2L 7984105 intron,5` UTR Snoo -,CG7231 + chr2L_7_7980001 chr2L_7980001 RAL-837 232 chr2L 7997012 7997065 chr2L 7997132 7997156 17 111 1.0 1.5 1.2 7.7 144 chr2L 7997012 intron CG7227 - chr2L 7997084 intron CG7227 - chr2L 7997156 intron CG7227 - chr2L_17_7995001 chr2L_7995001 RAL-837 233 chr2L 7998546 7998566 chr2L 7998644 7998664 4 98 3.0 3.5 3.2 1.0 118 chr2L 7998546 intergenic Sirup + chr2L 7998605 intergenic Sirup + chr2L 7998664 intergenic Sirup + chr2L_4_7995001 chr2L_7995001 RAL-837 234 chr2L 8044078 8044127 chr2L 8044177 8044219 10 96 2.0 4.5 3.2 2.4 141 chr2L 8044078 intron CG7466 + chr2L 8044148 intron CG7466 + chr2L 8044219 intron CG7466 + chr2L_10_8040001 chr2L_8040001 RAL-837 235 chr2L 8128009 8128059 chr2L 8128113 8128143 12 96 5.5 5.5 5.5 1.8 134 chr2L 8128009 intron CG8668 + chr2L 8128076 intron CG8668 + chr2L 8128143 intron CG8668 + chr2L_12_8125001 chr2L_8125001 RAL-837 236 chr2L 8271628 8271654 chr2L 8271722 8271728 11 92 1.0 5.5 3.2 2.6 100 chr2L 8271628 intron Btk29A - chr2L 8271678 intron Btk29A - chr2L 8271728 intron Btk29A - chr2L_11_8270001 chr2L_8270001 RAL-837 237 chr2L 8285019 8285032 chr2L 8285113 8285128 5 92 4.5 4.5 4.5 0.9 109 chr2L 8285019 intron Btk29A - chr2L 8285074 intron Btk29A - chr2L 8285128 intron Btk29A - chr2L_5_8285001 chr2L_8285001 RAL-837 238 chr2L 8411790 8411798 chr2L 8411962 8411970 4 172 6.0 1.0 3.5 0.9 180 chr2L 8411790 5` UTR CG13397 - chr2L 8411880 intergenic CG13397 -,CG13398 - chr2L 8411970 intergenic CG13397 -,CG13398 - chr2L_4_8410001 chr2L_8410001 RAL-837 239 chr2L 8451848 8451860 chr2L 8451969 8451988 8 131 2.0 6.0 4.0 1.6 140 chr2L 8451848 5` UTR fu12 - chr2L 8451918 intron fu12 - chr2L 8451988 intron fu12 - chr2L_8_8450001 chr2L_8450001 RAL-837 240 chr2L 8452405 8452450 chr2L 8461596 8461614 roo 12 9184 3.0 5.0 4.0 2.4 9209 chr2L 8452405 intron fu12 - chr2L 8457010 intron fu12 - chr2L 8461614 intron fu12 - chr2L_12_8455001 chr2L_8455001 RAL-837 241 chr2L 8468794 8468810 chr2L 8469252 8469268 7 457 7.0 4.5 5.8 1.0 474 chr2L 8468794 intron d + chr2L 8469031 intron d + chr2L 8469268 intron d + chr2L_7_8465001 chr2L_8465001 RAL-837 242 chr2L 8468811 8468835 chr2L 8469248 8469293 8 450 2.0 4.5 3.2 1.9 482 chr2L 8468811 intron d + chr2L 8469052 intron d + chr2L 8469293 intron d + chr2L_8_8465001 chr2L_8465001 RAL-837 243 chr2L 8498192 8498214 chr2L 8498293 8498315 5 99 7.0 5.0 6.0 0.7 123 chr2L 8498192 intron Dh31 - chr2L 8498254 intron Dh31 - chr2L 8498315 intron Dh31 - chr2L_5_8495001 chr2L_8495001 RAL-837 244 chr2L 8498218 8498239 chr2L 8498288 8498340 7 95 2.5 5.0 3.8 1.5 122 chr2L 8498218 intron Dh31 - chr2L 8498279 intron Dh31 - chr2L 8498340 intron Dh31 - chr2L_7_8495001 chr2L_8495001 RAL-837 245 chr2L 8510115 8510163 chr2L 8510224 8510272 6 108 3.0 3.0 3.0 1.5 157 chr2L 8510115 exon CG13096 - chr2L 8510194 intron CG13096 - chr2L 8510272 intron CG13096 - chr2L_6_8510001 chr2L_8510001 RAL-837 246 chr2L 8551415 8551432 chr2L 8551650 8551664 4 234 2.0 3.0 2.5 1.1 249 chr2L 8551415 intron Sema-1a + chr2L 8551540 intron Sema-1a + chr2L 8551664 intron Sema-1a + chr2L_4_8550001 chr2L_8550001 RAL-837 247 chr2L 8588909 8588925 chr2L 8589020 8589035 7 111 3.0 5.5 4.2 1.3 126 chr2L 8588909 intron Sema-1a + chr2L 8588972 intron Sema-1a + chr2L 8589035 intron Sema-1a + chr2L_7_8585001 chr2L_8585001 RAL-837 248 chr2L 8593807 8593839 chr2L 8593906 8593938 7 99 1.0 7.5 4.2 1.3 131 chr2L 8593807 intron,intron Sema-1a +,CR43855 - chr2L 8593872 intron,intron Sema-1a +,CR43855 - chr2L 8593938 intron,intron Sema-1a +,CR43855 - chr2L_7_8590001 chr2L_8590001 RAL-837 249 chr2L 8594445 8594496 chr2L 8601519 8601570 297 4 7072 3.0 0.0 1.5 1.6 7125 chr2L 8594445 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598008 intron Sema-1a + chr2L 8601570 intron Sema-1a + chr2L_4_8595001 chr2L_8595001 RAL-837 250 chr2L 8612839 8612866 chr2L 8612936 8612960 5 96 4.0 6.0 5.0 0.8 121 chr2L 8612839 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612960 intron Sema-1a + chr2L_5_8610001 chr2L_8610001 RAL-837 251 chr2L 8649910 8649961 chr2L 8650019 8650065 4 108 0.5 0.0 0.2 3.3 155 chr2L 8649910 intron Sema-1a + chr2L 8649988 intron Sema-1a + chr2L 8650065 intron Sema-1a + chr2L_4_8645001 chr2L_8645001 RAL-837 252 chr2L 8687065 8687095 chr2L 8687188 8687209 10 121 3.0 5.5 4.2 1.9 144 chr2L 8687065 intergenic Trs23 +,Hnf4 - chr2L 8687137 intergenic Trs23 +,Hnf4 - chr2L 8687209 intergenic Hnf4 -,Trs23 + chr2L_10_8685001 chr2L_8685001 RAL-837 253 chr2L 8695795 8695844 chr2L 8695968 8696017 19 170 5.5 3.5 4.5 3.5 222 chr2L 8695795 intron Hnf4 - chr2L 8695906 intron Hnf4 - chr2L 8696017 intron Hnf4 - chr2L_19_8695001 chr2L_8695001 RAL-837 254 chr2L 8719189 8719234 chr2L 8719283 8719330 9 94 2.0 0.5 1.2 4.1 141 chr2L 8719189 intron raw - chr2L 8719260 intron raw - chr2L 8719330 intron raw - chr2L_9_8715001 chr2L_8715001 RAL-837 255 chr2L 8723099 8723146 chr2L 8731491 8731543 Tirant 17 8396 4.0 5.0 4.5 3.1 8444 chr2L 8723099 intron raw - chr2L 8727321 intron raw - chr2L 8731543 intron raw - chr2L_17_8725001 chr2L_8725001 RAL-837 256 chr2L 8742751 8742938 chr2L 8742847 8743036 7 93 0.0 0.0 0.0 7.0 285 chr2L 8742751 intergenic not near genes chr2L 8742894 intergenic not near genes chr2L 8743036 intergenic not near genes chr2L_7_8740001 chr2L_8740001 RAL-837 257 chr2L 8750282 8750288 chr2L 8750409 8750416 4 128 0.5 2.0 1.2 1.8 134 chr2L 8750282 intergenic not near genes chr2L 8750349 intergenic not near genes chr2L 8750416 intergenic not near genes chr2L_4_8750001 chr2L_8750001 RAL-837 258 chr2L 8799779 8799831 chr2L 8799915 8799967 12 130 3.5 4.5 4.0 2.4 188 chr2L 8799779 intergenic not near genes chr2L 8799873 intergenic not near genes chr2L 8799967 intergenic not near genes chr2L_12_8795001 chr2L_8795001 RAL-837 259 chr2L 8815423 8815470 chr2L 8815526 8815568 8 96 3.5 5.0 4.2 1.5 145 chr2L 8815423 intergenic not near genes chr2L 8815496 intergenic not near genes chr2L 8815568 intergenic not near genes chr2L_8_8815001 chr2L_8815001 RAL-837 260 chr2L 8834086 8834108 chr2L 8834190 8834194 4 99 3.5 1.5 2.5 1.1 108 chr2L 8834086 intergenic not near genes chr2L 8834140 intergenic not near genes chr2L 8834194 intergenic not near genes chr2L_4_8830001 chr2L_8830001 RAL-837 261 chr2L 8876594 8876612 chr2L 8876736 8876758 5 146 25.5 19.5 22.5 0.2 164 chr2L 8876594 intergenic not near genes chr2L 8876676 intergenic not near genes chr2L 8876758 intergenic not near genes chr2L_5_8875001 chr2L_8875001 RAL-837 262 chr2L 8904362 8904387 chr2L 8904576 8904611 5 228 2.0 4.0 3.0 1.2 249 chr2L 8904362 intron CG34398 + chr2L 8904486 intron CG34398 + chr2L 8904611 intron CG34398 + chr2L_5_8900001 chr2L_8900001 RAL-837 263 chr2L 8939669 8939697 chr2L 8939752 8939797 8 95 2.5 4.0 3.2 1.9 128 chr2L 8939669 3` UTR Tsp29Fb + chr2L 8939733 3` UTR Tsp29Fb + chr2L 8939797 3` UTR CG9510 - chr2L_8_8935001 chr2L_8935001 RAL-837 264 chr2L 9000269 9000304 chr2L 9007794 9007834 roo 7 7527 5.5 1.0 3.2 1.7 7565 chr2L 9000269 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007834 intergenic not near genes chr2L_7_9000001 chr2L_9000001 RAL-837 265 chr2L 9053398 9053425 chr2L 9053653 9053678 8 253 5.0 0.5 2.8 2.1 280 chr2L 9053398 exon CG31708 - chr2L 9053538 intron CG31708 - chr2L 9053678 intron CG31708 - chr2L_8_9050001 chr2L_9050001 RAL-837 266 chr2L 9068156 9068207 chr2L 9068253 9068289 15 90 3.0 4.5 3.8 3.1 133 chr2L 9068156 intron CG31708 - chr2L 9068222 intron CG31708 - chr2L 9068289 intron CG31708 - chr2L_15_9065001 chr2L_9065001 RAL-837 267 chr2L 9073264 9073277 chr2L 9073370 9073373 4 104 3.0 5.5 4.2 0.8 109 chr2L 9073264 intergenic not near genes chr2L 9073318 intergenic not near genes chr2L 9073373 intergenic not near genes chr2L_4_9070001 chr2L_9070001 RAL-837 268 chr2L 9073285 9073299 chr2L 9073361 9073405 9 98 0.5 4.5 2.5 2.6 120 chr2L 9073285 intergenic not near genes chr2L 9073345 intergenic not near genes chr2L 9073405 intergenic not near genes chr2L_9_9070001 chr2L_9070001 RAL-837 269 chr2L 9095551 9095586 chr2L 9095658 9095693 16 103 8.0 4.0 6.0 2.3 142 chr2L 9095551 intergenic not near genes chr2L 9095622 intergenic not near genes chr2L 9095693 intergenic not near genes chr2L_16_9095001 chr2L_9095001 RAL-837 270 chr2L 9114077 9114122 chr2L 9114176 9114221 11 88 3.5 5.5 4.5 2.0 144 chr2L 9114077 intergenic not near genes chr2L 9114149 intergenic not near genes chr2L 9114221 intergenic not near genes chr2L_11_9110001 chr2L_9110001 RAL-837 271 chr2L 9152141 9152185 chr2L 9152229 9152282 10 93 1.0 2.0 1.5 4.0 141 chr2L 9152141 intron CG32982 + chr2L 9152212 intron CG32982 + chr2L 9152282 intron CG32982 + chr2L_10_9150001 chr2L_9150001 RAL-837 272 chr2L 9158778 9158795 chr2L 9158895 9158912 5 115 4.0 0.0 2.0 1.7 134 chr2L 9158778 intron CG32982 + chr2L 9158845 intron CG32982 + chr2L 9158912 intron CG32982 + chr2L_5_9155001 chr2L_9155001 RAL-837 273 chr2L 9168347 9168369 chr2L 9168716 9168738 7 365 8.5 4.0 6.2 1.0 391 chr2L 9168347 intron tai + chr2L 9168542 intron tai + chr2L 9168738 intron tai + chr2L_7_9165001 chr2L_9165001 RAL-837 274 chr2L 9195861 9196063 chr2L 9195962 9196125 22 96 4.0 4.0 4.0 4.4 264 chr2L 9195861 intron tai + chr2L 9195993 intron tai + chr2L 9196125 intron tai + chr2L_22_9195001 chr2L_9195001 RAL-837 275 chr2L 9202042 9202083 chr2L 9202133 9202133 6 88 3.0 5.5 4.2 1.2 91 chr2L 9202042 intron tai + chr2L 9202088 intron tai + chr2L 9202133 intron tai + chr2L_6_9200001 chr2L_9200001 RAL-837 276 chr2L 9251124 9251178 chr2L 9251241 9251241 8 96 6.0 2.5 4.2 1.5 117 chr2L 9251124 intergenic aust -,borr - chr2L 9251182 intergenic aust -,borr - chr2L 9251241 intergenic aust -,borr - chr2L_8_9250001 chr2L_9250001 RAL-837 277 chr2L 9285007 9285040 chr2L 9285100 9285136 8 90 1.5 2.5 2.0 2.7 129 chr2L 9285007 intron Ggamma30A + chr2L 9285072 intron Ggamma30A + chr2L 9285136 intron Ggamma30A + chr2L_8_9285001 chr2L_9285001 RAL-837 278 chr2L 9297358 9297392 chr2L 9297455 9297489 9 97 3.5 1.5 2.5 2.6 131 chr2L 9297358 3` UTR Ggamma30A + chr2L 9297424 3` UTR Ggamma30A + chr2L 9297489 3` UTR Ggamma30A + chr2L_9_9295001 chr2L_9295001 RAL-837 279 chr2L 9303495 9303547 chr2L 9303595 9303639 11 97 3.0 6.5 4.8 1.9 144 chr2L 9303495 intergenic not near genes chr2L 9303567 intergenic not near genes chr2L 9303639 intergenic not near genes chr2L_11_9300001 chr2L_9300001 RAL-837 280 chr2L 9335089 9335103 chr2L 9335229 9335243 5 140 3.5 4.5 4.0 1.0 154 chr2L 9335089 intron Eaat1 + chr2L 9335166 intron Eaat1 + chr2L 9335243 intron Eaat1 + chr2L_5_9335001 chr2L_9335001 RAL-837 281 chr2L 9355798 9355841 chr2L 9356444 9356487 11 641 2.0 5.0 3.5 2.4 689 chr2L 9355798 intergenic not near genes chr2L 9356142 intergenic not near genes chr2L 9356487 intergenic not near genes chr2L_11_9355001 chr2L_9355001 RAL-837 282 chr2L 9380232 9380239 chr2L 9380347 9380354 4 115 6.0 3.0 4.5 0.7 122 chr2L 9380232 exon Shawl - chr2L 9380293 intron Shawl - chr2L 9380354 intron Shawl - chr2L_4_9380001 chr2L_9380001 RAL-837 283 chr2L 9380251 9380253 chr2L 9380346 9380368 4 107 5.0 3.0 4.0 0.8 117 chr2L 9380251 exon Shawl - chr2L 9380310 intron Shawl - chr2L 9380368 intron Shawl - chr2L_4_9380001 chr2L_9380001 RAL-837 284 chr2L 9387233 9387275 chr2L 9387351 9387378 9 114 3.0 1.5 2.2 2.8 145 chr2L 9387233 intron Shawl - chr2L 9387306 intron Shawl - chr2L 9387378 intron Shawl - chr2L_9_9385001 chr2L_9385001 RAL-837 285 chr2L 9393479 9393530 chr2L 9396466 9396512 jockey 7 2985 2.5 2.0 2.2 2.2 3033 chr2L 9393479 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396512 intron Shawl - chr2L_7_9390001 chr2L_9390001 RAL-837 286 chr2L 9407888 9407899 chr2L 9407990 9408001 4 102 1.5 1.0 1.2 1.8 113 chr2L 9407888 intron Shawl - chr2L 9407944 intron Shawl - chr2L 9408001 intron Shawl - chr2L_4_9405001 chr2L_9405001 RAL-837 287 chr2L 9451018 9451066 chr2L 9451143 9451182 8 114 0.0 6.5 3.2 1.9 164 chr2L 9451018 intron numb + chr2L 9451100 intron numb + chr2L 9451182 intron numb + chr2L_8_9450001 chr2L_9450001 RAL-837 288 chr2L 9452462 9452496 chr2L 9452563 9452567 6 97 0.0 3.0 1.5 2.4 105 chr2L 9452462 intron numb + chr2L 9452514 intron numb + chr2L 9452567 intron numb + chr2L_6_9450001 chr2L_9450001 RAL-837 289 chr2L 9456910 9456954 chr2L 9457011 9457024 9 94 3.5 3.5 3.5 2.0 114 chr2L 9456910 intron numb + chr2L 9456967 intron numb + chr2L 9457024 intron numb + chr2L_9_9455001 chr2L_9455001 RAL-837 290 chr2L 9463748 9463769 chr2L 9463853 9463864 7 102 4.5 5.0 4.8 1.2 116 chr2L 9463748 intergenic not near genes chr2L 9463806 intergenic not near genes chr2L 9463864 intergenic not near genes chr2L_7_9460001 chr2L_9460001 RAL-837 291 chr2L 9467979 9468027 chr2L 9468085 9468129 10 101 3.0 2.0 2.5 2.9 150 chr2L 9467979 intergenic not near genes chr2L 9468054 intergenic not near genes chr2L 9468129 intergenic not near genes chr2L_10_9465001 chr2L_9465001 RAL-837 292 chr2L 9526840 9526875 chr2L 9526940 9526987 18 103 2.0 3.0 2.5 5.1 147 chr2L 9526840 intron Oatp30B + chr2L 9526914 intron Oatp30B + chr2L 9526987 intron Oatp30B + chr2L_18_9525001 chr2L_9525001 RAL-837 293 chr2L 9556896 9556923 chr2L 9556984 9556993 7 89 4.0 9.5 6.8 0.9 97 chr2L 9556896 intron jp - chr2L 9556944 intron jp - chr2L 9556993 intron jp - chr2L_7_9555001 chr2L_9555001 RAL-837 294 chr2L 9558309 9558326 chr2L 9558417 9558434 5 108 0.0 2.5 1.2 2.3 125 chr2L 9558309 intron jp - chr2L 9558372 intron jp - chr2L 9558434 intron jp - chr2L_5_9555001 chr2L_9555001 RAL-837 295 chr2L 9620786 9620791 chr2L 9620888 9620894 4 103 8.5 0.0 4.2 0.8 108 chr2L 9620786 intron GlcAT-S + chr2L 9620840 intron GlcAT-S + chr2L 9620894 intron GlcAT-S + chr2L_4_9620001 chr2L_9620001 RAL-837 296 chr2L 9620826 9620835 chr2L 9620885 9620938 5 83 2.0 0.0 1.0 2.5 112 chr2L 9620826 intron GlcAT-S + chr2L 9620882 intron GlcAT-S + chr2L 9620938 intron GlcAT-S + chr2L_5_9620001 chr2L_9620001 RAL-837 297 chr2L 9686328 9686340 chr2L 9686432 9686436 5 102 12.5 1.0 6.8 0.6 108 chr2L 9686328 intron Pka-C1 - chr2L 9686382 intron Pka-C1 - chr2L 9686436 intron Pka-C1 - chr2L_5_9685001 chr2L_9685001 RAL-837 298 chr2L 9686342 9686377 chr2L 9686429 9686457 16 90 7.5 1.0 4.2 3.1 115 chr2L 9686342 intron Pka-C1 - chr2L 9686400 intron Pka-C1 - chr2L 9686457 intron Pka-C1 - chr2L_16_9685001 chr2L_9685001 RAL-837 299 chr2L 9719756 9719778 chr2L 9719859 9719881 4 103 0.0 0.5 0.2 3.3 125 chr2L 9719756 intron Nckx30C - chr2L 9719818 intron Nckx30C - chr2L 9719881 intron Nckx30C - chr2L_4_9715001 chr2L_9715001 RAL-837 300 chr2L 9770763 9770775 chr2L 9770876 9770878 4 110 4.0 3.5 3.8 0.8 115 chr2L 9770763 intron ppk18 - chr2L 9770820 intron ppk18 - chr2L 9770878 intron ppk18 - chr2L_4_9770001 chr2L_9770001 RAL-837 301 chr2L 9836394 9836417 chr2L 9836489 9836495 6 89 2.5 2.5 2.5 1.7 101 chr2L 9836394 intron nAChRalpha6 - chr2L 9836444 intron nAChRalpha6 - chr2L 9836495 intron nAChRalpha6 - chr2L_6_9835001 chr2L_9835001 RAL-837 302 chr2L 9836418 9836430 chr2L 9836478 9836530 7 93 2.0 2.5 2.2 2.2 112 chr2L 9836418 intron nAChRalpha6 - chr2L 9836474 intron nAChRalpha6 - chr2L 9836530 intron nAChRalpha6 - chr2L_7_9835001 chr2L_9835001 RAL-837 303 chr2L 9837420 9837438 chr2L 9837518 9837521 4 94 4.5 2.0 3.2 1.0 101 chr2L 9837420 intron nAChRalpha6 - chr2L 9837470 intron nAChRalpha6 - chr2L 9837521 intron nAChRalpha6 - chr2L_4_9835001 chr2L_9835001 RAL-837 304 chr2L 9883144 9883171 chr2L 9883260 9883287 10 114 6.5 2.0 4.2 1.9 143 chr2L 9883144 intron nAChRalpha6 - chr2L 9883216 intron nAChRalpha6 - chr2L 9883287 intron nAChRalpha6 - chr2L_10_9880001 chr2L_9880001 RAL-837 305 chr2L 9960706 9960759 chr2L 9960866 9960917 7 154 1.5 3.0 2.2 2.2 211 chr2L 9960706 3` UTR CG5850 - chr2L 9960812 3` UTR CG5850 - chr2L 9960917 3` UTR CG5850 - chr2L_7_9960001 chr2L_9960001 RAL-837 306 chr2L 9973711 9973755 chr2L 9980850 9980894 HMS-Beagle 15 7137 1.5 4.5 3.0 3.8 7183 chr2L 9973711 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980894 intergenic not near genes chr2L_15_9975001 chr2L_9975001 RAL-837 307 chr2L 9982201 9982227 chr2L 9982304 9982351 12 122 0.0 4.5 2.2 3.8 150 chr2L 9982201 intergenic not near genes chr2L 9982276 intergenic not near genes chr2L 9982351 intergenic not near genes chr2L_12_9980001 chr2L_9980001 RAL-837 308 chr2L 10023062 10023101 chr2L 10023167 10023206 8 101 3.5 7.5 5.5 1.2 144 chr2L 10023062 intergenic not near genes chr2L 10023134 intergenic not near genes chr2L 10023206 intergenic not near genes chr2L_8_10020001 chr2L_10020001 RAL-837 309 chr2L 10045395 10045430 chr2L 10045495 10045530 6 95 5.0 6.0 5.5 0.9 135 chr2L 10045395 intergenic not near genes chr2L 10045462 intergenic not near genes chr2L 10045530 intergenic not near genes chr2L_6_10045001 chr2L_10045001 RAL-837 310 chr2L 10051707 10051727 chr2L 10051812 10051832 4 105 5.5 4.0 4.8 0.7 125 chr2L 10051707 5` UTR CR44874 + chr2L 10051770 5` UTR CR44874 + chr2L 10051832 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-837 311 chr2L 10051732 10051743 chr2L 10051811 10051837 6 96 3.5 3.5 3.5 1.3 105 chr2L 10051732 5` UTR CR44874 + chr2L 10051784 5` UTR CR44874 + chr2L 10051837 5` UTR CR44874 + chr2L_6_10050001 chr2L_10050001 RAL-837 312 chr2L 10087467 10087487 chr2L 10087563 10087584 5 95 4.0 5.5 4.8 0.9 117 chr2L 10087467 intron CG44153 - chr2L 10087526 intron CG44153 - chr2L 10087584 intron CG44153 - chr2L_5_10085001 chr2L_10085001 RAL-837 313 chr2L 10114974 10115004 chr2L 10115077 10115107 9 102 2.5 1.0 1.8 3.2 133 chr2L 10114974 intron,intron CG44153 -,CG34109 + chr2L 10115040 intron,intron CG44153 -,CG34109 + chr2L 10115107 intron,intron CG44153 -,CG34109 + chr2L_9_10115001 chr2L_10115001 RAL-837 314 chr2L 10153211 10153235 chr2L 10153279 10153319 8 91 2.0 1.5 1.8 2.9 108 chr2L 10153211 intron,exon CG44153 -,CG4839 + chr2L 10153265 intron,intron CG44153 -,CG4839 + chr2L 10153319 intron,intron CG44153 -,CG4839 + chr2L_8_10150001 chr2L_10150001 RAL-837 315 chr2L 10156338 10156352 chr2L 10163797 10163831 blood 4 7479 2.5 6.5 4.5 0.7 7493 chr2L 10156338 intron,3` UTR CG44153 -,CG4839 + chr2L 10160084 intron CG44153 - chr2L 10163831 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-837 316 chr2L 10276178 10276226 chr2L 10276276 10276324 10 96 4.0 2.0 3.0 2.5 146 chr2L 10276178 intron Utx - chr2L 10276251 intron Utx - chr2L 10276324 intron Utx - chr2L_10_10275001 chr2L_10275001 RAL-837 317 chr2L 10407726 10407752 chr2L 10407827 10407853 4 101 0.5 2.0 1.2 1.8 127 chr2L 10407726 intron Ir31a + chr2L 10407790 intron Ir31a + chr2L 10407853 exon Ir31a + chr2L_4_10405001 chr2L_10405001 RAL-837 318 chr2L 10458087 10458098 chr2L 10458368 10458379 4 278 1.5 1.0 1.2 1.8 292 chr2L 10458087 intron LM408 + chr2L 10458233 intron LM408 + chr2L 10458379 intron LM408 + chr2L_4_10455001 chr2L_10455001 RAL-837 319 chr2L 10500042 10500081 chr2L 10500148 10500187 14 104 0.5 1.5 1.0 7.0 145 chr2L 10500042 intron Myo31DF - chr2L 10500114 intron Myo31DF - chr2L 10500187 intron Myo31DF - chr2L_14_10500001 chr2L_10500001 RAL-837 320 chr2L 10531595 10531624 chr2L 10531707 10531736 7 108 0.0 0.0 0.0 7.0 141 chr2L 10531595 3` UTR Lip4 + chr2L 10531666 3` UTR Lip4 + chr2L 10531736 3` UTR Lip4 + chr2L_7_10530001 chr2L_10530001 RAL-837 321 chr2L 10540854 10540878 chr2L 10540952 10540976 7 96 8.0 4.0 6.0 1.0 122 chr2L 10540854 intergenic not near genes chr2L 10540915 intergenic not near genes chr2L 10540976 intergenic not near genes chr2L_7_10540001 chr2L_10540001 RAL-837 322 chr2L 10574554 10574601 chr2L 10574665 10574698 13 114 2.0 3.5 2.8 3.4 144 chr2L 10574554 intron Trim9 + chr2L 10574626 intron Trim9 + chr2L 10574698 intron Trim9 + chr2L_13_10570001 chr2L_10570001 RAL-837 323 chr2L 10592837 10592875 chr2L 10600504 10600557 opus 6 7669 1.0 4.0 2.5 1.7 7720 chr2L 10592837 intron Trim9 + chr2L 10596697 intron Trim9 + chr2L 10600557 intron Trim9 + chr2L_6_10595001 chr2L_10595001 RAL-837 324 chr2L 10640621 10640672 chr2L 10640730 10640749 15 105 2.5 3.0 2.8 3.9 128 chr2L 10640621 exon CG31872 + chr2L 10640685 exon CG31872 + chr2L 10640749 exon CG31872 + chr2L_15_10640001 chr2L_10640001 RAL-837 325 chr2L 10683429 10683443 chr2L 10683528 10683542 4 99 6.0 0.5 3.2 1.0 113 chr2L 10683429 3` UTR CG7299 - chr2L 10683486 3` UTR CG7299 - chr2L 10683542 3` UTR CG7299 - chr2L_4_10680001 chr2L_10680001 RAL-837 326 chr2L 10713886 10713912 chr2L 10714006 10714032 7 120 4.0 5.0 4.5 1.3 146 chr2L 10713886 intergenic not near genes chr2L 10713959 intergenic not near genes chr2L 10714032 intergenic not near genes chr2L_7_10710001 chr2L_10710001 RAL-837 327 chr2L 10752376 10752390 chr2L 10752536 10752545 6 158 8.0 4.5 6.2 0.8 169 chr2L 10752376 intron CG17124 - chr2L 10752460 intron CG17124 - chr2L 10752545 intron CG17124 - chr2L_6_10750001 chr2L_10750001 RAL-837 328 chr2L 10752396 10752407 chr2L 10752531 10752540 5 146 4.0 3.5 3.8 1.0 144 chr2L 10752396 intron CG17124 - chr2L 10752468 intron CG17124 - chr2L 10752540 intron CG17124 - chr2L_5_10750001 chr2L_10750001 RAL-837 329 chr2L 10801966 10801995 chr2L 10802047 10802059 11 87 2.0 3.5 2.8 2.9 93 chr2L 10801966 3` UTR CR44581 - chr2L 10802012 3` UTR CR44581 - chr2L 10802059 3` UTR CR44581 - chr2L_11_10800001 chr2L_10800001 RAL-837 330 chr2L 10830829 10830850 chr2L 10830929 10830950 7 99 6.5 4.0 5.2 1.1 121 chr2L 10830829 intron Nos - chr2L 10830890 intron Nos - chr2L 10830950 intron Nos - chr2L_7_10830001 chr2L_10830001 RAL-837 331 chr2L 10836743 10836778 chr2L 10836842 10836876 4 98 4.0 2.5 3.2 1.0 133 chr2L 10836743 intron Nos - chr2L 10836810 intron Nos - chr2L 10836876 intron Nos - chr2L_4_10835001 chr2L_10835001 RAL-837 332 chr2L 10852150 10852171 chr2L 10852259 10852264 8 107 8.5 6.0 7.2 1.0 114 chr2L 10852150 intron CG43129 + chr2L 10852207 intron CG43129 + chr2L 10852264 intron CG43129 + chr2L_8_10850001 chr2L_10850001 RAL-837 333 chr2L 10861542 10861554 chr2L 10861610 10861654 7 95 2.0 1.5 1.8 2.5 112 chr2L 10861542 3` UTR Stam + chr2L 10861598 3` UTR Stam + chr2L 10861654 3` UTR Stam + chr2L_7_10860001 chr2L_10860001 RAL-837 334 chr2L 10862832 10862868 chr2L 10864466 10864502 Rt1c 7 1632 3.5 8.0 5.8 1.0 1670 chr2L 10862832 3` UTR CR43807 - chr2L 10863667 intron CR43807 - chr2L 10864502 3` UTR CR43807 - chr2L_7_10860001 chr2L_10860001 RAL-837 335 chr2L 10869252 10869310 chr2L 10869368 10869419 11 111 3.0 1.5 2.2 3.4 167 chr2L 10869252 intergenic not near genes chr2L 10869336 intergenic not near genes chr2L 10869419 intergenic not near genes chr2L_11_10865001 chr2L_10865001 RAL-837 336 chr2L 10939754 10939796 chr2L 10939855 10939897 7 101 1.5 3.5 2.5 2.0 143 chr2L 10939754 intron dpr2 - chr2L 10939826 intron dpr2 - chr2L 10939897 intron dpr2 - chr2L_7_10935001 chr2L_10935001 RAL-837 337 chr2L 10946943 10946969 chr2L 10956178 10956204 roo 7 9234 5.0 6.0 5.5 1.1 9261 chr2L 10946943 intron dpr2 - chr2L 10951574 intron dpr2 - chr2L 10956204 intron dpr2 - chr2L_7_10950001 chr2L_10950001 RAL-837 338 chr2L 11032353 11032376 chr2L 11032466 11032482 5 112 0.0 3.5 1.8 1.8 129 chr2L 11032353 intron Samuel - chr2L 11032418 intron Samuel - chr2L 11032482 intron Samuel - chr2L_5_11030001 chr2L_11030001 RAL-837 339 chr2L 11169458 11169502 chr2L 11169613 11169657 14 153 1.5 5.0 3.2 3.3 199 chr2L 11169458 intron Ca-beta - chr2L 11169558 intron Ca-beta - chr2L 11169657 intron Ca-beta - chr2L_14_11165001 chr2L_11165001 RAL-837 340 chr2L 11189226 11189253 chr2L 11189343 11189366 9 117 3.5 0.0 1.8 3.2 140 chr2L 11189226 intron Ca-beta - chr2L 11189296 intron Ca-beta - chr2L 11189366 intron Ca-beta - chr2L_9_11185001 chr2L_11185001 RAL-837 341 chr2L 11193552 11193596 chr2L 11193655 11193694 5 102 0.0 7.0 3.5 1.1 142 chr2L 11193552 intron Ca-beta - chr2L 11193623 intron Ca-beta - chr2L 11193694 intron Ca-beta - chr2L_5_11190001 chr2L_11190001 RAL-837 342 chr2L 11198491 11198514 chr2L 11198593 11198611 5 101 0.0 5.5 2.8 1.3 120 chr2L 11198491 intron Ca-beta - chr2L 11198551 intron Ca-beta - chr2L 11198611 intron Ca-beta - chr2L_5_11195001 chr2L_11195001 RAL-837 343 chr2L 11201675 11201701 chr2L 11201774 11201787 5 94 4.0 0.0 2.0 1.7 112 chr2L 11201675 intron Ca-beta - chr2L 11201731 intron Ca-beta - chr2L 11201787 intron Ca-beta - chr2L_5_11200001 chr2L_11200001 RAL-837 344 chr2L 11248555 11248586 chr2L 11248652 11248689 7 102 3.0 1.0 2.0 2.3 134 chr2L 11248555 intron ab + chr2L 11248622 intron ab + chr2L 11248689 intron ab + chr2L_7_11245001 chr2L_11245001 RAL-837 345 chr2L 11253328 11253353 chr2L 11253429 11253454 5 101 8.0 4.5 6.2 0.7 126 chr2L 11253328 intron ab + chr2L 11253391 intron ab + chr2L 11253454 intron ab + chr2L_5_11250001 chr2L_11250001 RAL-837 346 chr2L 11253354 11253361 chr2L 11253420 11253452 6 84 6.0 4.0 5.0 1.0 98 chr2L 11253354 intron ab + chr2L 11253403 intron ab + chr2L 11253452 intron ab + chr2L_6_11250001 chr2L_11250001 RAL-837 347 chr2L 11292359 11292405 chr2L 11292456 11292507 11 100 7.5 2.5 5.0 1.8 148 chr2L 11292359 intergenic not near genes chr2L 11292433 intergenic not near genes chr2L 11292507 intergenic not near genes chr2L_11_11290001 chr2L_11290001 RAL-837 348 chr2L 11298821 11298852 chr2L 11298913 11298949 8 90 2.5 2.5 2.5 2.3 128 chr2L 11298821 intergenic not near genes chr2L 11298885 intergenic not near genes chr2L 11298949 intergenic not near genes chr2L_8_11295001 chr2L_11295001 RAL-837 349 chr2L 11330185 11330234 chr2L 11330301 11330350 14 115 5.0 6.0 5.5 2.2 165 chr2L 11330185 intergenic not near genes chr2L 11330268 intergenic not near genes chr2L 11330350 intergenic not near genes chr2L_14_11330001 chr2L_11330001 RAL-837 350 chr2L 11399510 11399535 chr2L 11399606 11399610 7 94 1.5 0.0 0.8 3.9 100 chr2L 11399510 intergenic not near genes chr2L 11399560 intergenic not near genes chr2L 11399610 intergenic not near genes chr2L_7_11395001 chr2L_11395001 RAL-837 351 chr2L 11453112 11453152 chr2L 11453234 11453248 7 126 0.0 2.5 1.2 3.2 136 chr2L 11453112 intergenic not near genes chr2L 11453180 intergenic not near genes chr2L 11453248 intergenic not near genes chr2L_7_11450001 chr2L_11450001 RAL-837 352 chr2L 11480207 11480228 chr2L 11480348 11480399 7 165 2.0 2.0 2.0 2.3 192 chr2L 11480207 intergenic not near genes chr2L 11480303 intergenic not near genes chr2L 11480399 intergenic not near genes chr2L_7_11480001 chr2L_11480001 RAL-837 353 chr2L 11540590 11540616 chr2L 11548012 11548023 Tabor 7 7420 3.5 6.5 5.0 1.2 7433 chr2L 11540590 intergenic not near genes chr2L 11544306 intergenic not near genes chr2L 11548023 intergenic not near genes chr2L_7_11540001 chr2L_11540001 RAL-837 354 chr2L 11563636 11563661 chr2L 11568848 11568848 copia 7 5210 3.5 3.5 3.5 1.6 5212 chr2L 11563636 intergenic not near genes chr2L 11566242 intergenic not near genes chr2L 11568848 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-837 355 chr2L 11614034 11614084 chr2L 11615549 11615556 hopper2 11 1508 0.5 2.5 1.5 4.4 1522 chr2L 11614034 intron kek2 + chr2L 11614795 intron kek2 + chr2L 11615556 intron kek2 + chr2L_11_11610001 chr2L_11610001 RAL-837 356 chr2L 11618532 11618574 chr2L 11618643 11618676 7 110 1.5 3.5 2.5 2.0 144 chr2L 11618532 intron kek2 + chr2L 11618604 intron kek2 + chr2L 11618676 intron kek2 + chr2L_7_11615001 chr2L_11615001 RAL-837 357 chr2L 11633155 11633193 chr2L 11633271 11633294 8 119 2.0 1.0 1.5 3.2 139 chr2L 11633155 intergenic not near genes chr2L 11633224 intergenic not near genes chr2L 11633294 intergenic not near genes chr2L_8_11630001 chr2L_11630001 RAL-837 358 chr2L 11633775 11633820 chr2L 11633877 11633922 10 98 2.5 3.0 2.8 2.6 147 chr2L 11633775 intergenic not near genes chr2L 11633848 intergenic not near genes chr2L 11633922 intergenic not near genes chr2L_10_11630001 chr2L_11630001 RAL-837 359 chr2L 11710023 11710069 chr2L 11710122 11710125 11 90 2.0 0.5 1.2 5.0 102 chr2L 11710023 intergenic not near genes chr2L 11710074 intergenic not near genes chr2L 11710125 intergenic not near genes chr2L_11_11710001 chr2L_11710001 RAL-837 360 chr2L 11713497 11713540 chr2L 11720980 11721023 blood 14 7483 3.0 1.5 2.2 4.4 7526 chr2L 11713497 intergenic not near genes chr2L 11717260 intergenic not near genes chr2L 11721023 intergenic CR44143 + chr2L_14_11715001 chr2L_11715001 RAL-837 361 chr2L 11725212 11725252 chr2L 11725300 11725340 15 92 2.0 1.5 1.8 5.4 128 chr2L 11725212 intergenic not near genes chr2L 11725276 intergenic not near genes chr2L 11725340 intergenic not near genes chr2L_15_11725001 chr2L_11725001 RAL-837 362 chr2L 11752888 11752893 chr2L 11753170 11753203 4 301 1.5 4.0 2.8 1.1 315 chr2L 11752888 intergenic CG42470 - chr2L 11753046 3` UTR CG42470 - chr2L 11753203 exon CG42470 - chr2L_4_11750001 chr2L_11750001 RAL-837 363 chr2L 11841326 11841349 chr2L 11841443 11841466 9 117 6.0 0.0 3.0 2.2 140 chr2L 11841326 intron Pde1c - chr2L 11841396 intron Pde1c - chr2L 11841466 intron Pde1c - chr2L_9_11840001 chr2L_11840001 RAL-837 364 chr2L 11862342 11862390 chr2L 11862450 11862481 14 108 1.0 5.0 3.0 3.5 139 chr2L 11862342 intron Pde1c - chr2L 11862412 intron Pde1c - chr2L 11862481 intron Pde1c - chr2L_14_11860001 chr2L_11860001 RAL-837 365 chr2L 11904651 11904678 chr2L 11904789 11904790 8 129 5.5 3.0 4.2 1.5 139 chr2L 11904651 intron Pde1c - chr2L 11904720 intron Pde1c - chr2L 11904790 intron Pde1c - chr2L_8_11900001 chr2L_11900001 RAL-837 366 chr2L 11904688 11904699 chr2L 11904785 11904837 4 128 2.5 2.0 2.2 1.2 149 chr2L 11904688 intron Pde1c - chr2L 11904762 intron Pde1c - chr2L 11904837 intron Pde1c - chr2L_4_11900001 chr2L_11900001 RAL-837 367 chr2L 11906771 11906798 chr2L 11906873 11906900 6 102 4.0 2.5 3.2 1.4 129 chr2L 11906771 intron Pde1c - chr2L 11906836 intron Pde1c - chr2L 11906900 intron Pde1c - chr2L_6_11905001 chr2L_11905001 RAL-837 368 chr2L 11906802 11906813 chr2L 11906869 11906915 8 91 2.5 2.5 2.5 2.3 113 chr2L 11906802 intron Pde1c - chr2L 11906858 intron Pde1c - chr2L 11906915 intron Pde1c - chr2L_8_11905001 chr2L_11905001 RAL-837 369 chr2L 11947363 11947398 chr2L 11947460 11947495 14 96 3.5 3.5 3.5 3.1 132 chr2L 11947363 intergenic Cry + chr2L 11947429 intergenic Cry + chr2L 11947495 intergenic Cry +,CG16964 + chr2L_14_11945001 chr2L_11945001 RAL-837 370 chr2L 11951323 11951334 chr2L 11951440 11951451 4 117 8.0 4.0 6.0 0.6 128 chr2L 11951323 intergenic not near genes chr2L 11951387 intergenic not near genes chr2L 11951451 intergenic not near genes chr2L_4_11950001 chr2L_11950001 RAL-837 371 chr2L 11951336 11951364 chr2L 11951436 11951463 8 113 2.5 3.5 3.0 2.0 127 chr2L 11951336 intergenic not near genes chr2L 11951400 intergenic not near genes chr2L 11951463 intergenic not near genes chr2L_8_11950001 chr2L_11950001 RAL-837 372 chr2L 11951963 11951994 chr2L 11952061 11952066 8 98 0.5 4.5 2.5 2.3 103 chr2L 11951963 intergenic CR43314 - chr2L 11952014 intergenic CR43314 - chr2L 11952066 intergenic CR43314 - chr2L_8_11950001 chr2L_11950001 RAL-837 373 chr2L 11976069 11976115 chr2L 11976166 11976212 10 92 6.5 0.5 3.5 2.2 143 chr2L 11976069 intergenic not near genes chr2L 11976140 intergenic not near genes chr2L 11976212 intergenic not near genes chr2L_10_11975001 chr2L_11975001 RAL-837 374 chr2L 12067310 12067359 chr2L 12074382 12074426 297 18 7067 3.0 6.0 4.5 3.3 7116 chr2L 12067310 intergenic not near genes chr2L 12070868 intergenic not near genes chr2L 12074426 intergenic not near genes chr2L_18_12070001 chr2L_12070001 RAL-837 375 chr2L 12131466 12131497 chr2L 12131565 12131613 11 111 3.0 3.5 3.2 2.6 147 chr2L 12131466 intron rho-6 - chr2L 12131540 intron rho-6 - chr2L 12131613 intron rho-6 - chr2L_11_12130001 chr2L_12130001 RAL-837 376 chr2L 12132707 12132743 chr2L 12132808 12132849 11 105 0.5 4.0 2.2 3.4 142 chr2L 12132707 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132849 intron rho-6 - chr2L_11_12130001 chr2L_12130001 RAL-837 377 chr2L 12151893 12151923 chr2L 12151991 12152038 11 105 3.5 5.5 4.5 2.0 145 chr2L 12151893 intron CG31760 + chr2L 12151966 intron CG31760 + chr2L 12152038 intron CG31760 + chr2L_11_12150001 chr2L_12150001 RAL-837 378 chr2L 12153924 12153939 chr2L 12154021 12154036 5 97 4.5 8.0 6.2 0.7 112 chr2L 12153924 exon CG31760 + chr2L 12153980 intron CG31760 + chr2L 12154036 intron CG31760 + chr2L_5_12150001 chr2L_12150001 RAL-837 379 chr2L 12179746 12179792 chr2L 12179852 12179896 9 102 0.5 0.5 0.5 6.0 150 chr2L 12179746 intron aret + chr2L 12179821 intron aret + chr2L 12179896 intron aret + chr2L_9_12175001 chr2L_12175001 RAL-837 380 chr2L 12233769 12233806 chr2L 12233861 12233877 15 92 4.0 5.5 4.8 2.6 108 chr2L 12233769 intron aret + chr2L 12233823 intron aret + chr2L 12233877 intron aret + chr2L_15_12230001 chr2L_12230001 RAL-837 381 chr2L 12236995 12237019 chr2L 12237100 12237124 5 102 2.5 3.5 3.0 1.2 129 chr2L 12236995 intron aret + chr2L 12237060 intron aret + chr2L 12237124 intron aret + chr2L_5_12235001 chr2L_12235001 RAL-837 382 chr2L 12237025 12237036 chr2L 12237090 12237111 4 88 1.0 2.0 1.5 1.6 86 chr2L 12237025 intron aret + chr2L 12237068 intron aret + chr2L 12237111 intron aret + chr2L_4_12235001 chr2L_12235001 RAL-837 383 chr2L 12239055 12239087 chr2L 12239148 12239195 8 94 1.5 4.0 2.8 2.1 140 chr2L 12239055 intron aret + chr2L 12239125 intron aret + chr2L 12239195 intron aret + chr2L_8_12235001 chr2L_12235001 RAL-837 384 chr2L 12249888 12249938 chr2L 12250062 12250101 7 166 4.0 0.0 2.0 2.3 213 chr2L 12249888 intron aret + chr2L 12249994 intron aret + chr2L 12250101 intron aret + chr2L_7_12245001 chr2L_12245001 RAL-837 385 chr2L 12269826 12269862 chr2L 12270056 12270074 5 229 4.5 1.5 3.0 1.2 248 chr2L 12269826 intron aret + chr2L 12269950 intron aret + chr2L 12270074 intron aret + chr2L_5_12265001 chr2L_12265001 RAL-837 386 chr2L 12294243 12294278 chr2L 12294345 12294380 9 100 2.0 4.5 3.2 2.1 137 chr2L 12294243 intron aret + chr2L 12294312 intron aret + chr2L 12294380 intron aret + chr2L_9_12290001 chr2L_12290001 RAL-837 387 chr2L 12299602 12299643 chr2L 12299699 12299728 9 90 4.5 5.5 5.0 1.5 126 chr2L 12299602 intron aret + chr2L 12299665 intron aret + chr2L 12299728 intron aret + chr2L_9_12295001 chr2L_12295001 RAL-837 388 chr2L 12337267 12337308 chr2L 12337374 12337416 12 103 2.5 0.0 1.2 5.5 149 chr2L 12337267 intergenic not near genes chr2L 12337342 intergenic not near genes chr2L 12337416 intergenic not near genes chr2L_12_12335001 chr2L_12335001 RAL-837 389 chr2L 12487871 12487883 chr2L 12487972 12487984 4 101 9.5 4.0 6.8 0.5 113 chr2L 12487871 intron bun - chr2L 12487928 intron bun - chr2L 12487984 intron bun - chr2L_4_12485001 chr2L_12485001 RAL-837 390 chr2L 12487884 12487918 chr2L 12487969 12488015 12 89 4.5 3.5 4.0 2.4 131 chr2L 12487884 intron bun - chr2L 12487950 intron bun - chr2L 12488015 intron bun - chr2L_12_12485001 chr2L_12485001 RAL-837 391 chr2L 12490263 12490296 chr2L 12490359 12490387 4 95 0.5 3.5 2.0 1.3 124 chr2L 12490263 intron bun - chr2L 12490325 intron bun - chr2L 12490387 intron bun - chr2L_4_12490001 chr2L_12490001 RAL-837 392 chr2L 12510120 12510133 chr2L 12510217 12510230 4 94 9.5 8.5 9.0 0.4 110 chr2L 12510120 intron bun - chr2L 12510175 intron bun - chr2L 12510230 intron bun - chr2L_4_12510001 chr2L_12510001 RAL-837 393 chr2L 12533093 12533104 chr2L 12533196 12533207 5 103 0.0 2.0 1.0 2.5 114 chr2L 12533093 intron bun - chr2L 12533150 intron bun - chr2L 12533207 intron bun - chr2L_5_12530001 chr2L_12530001 RAL-837 394 chr2L 12558298 12558353 chr2L 12565447 12565502 HMS-Beagle 18 7144 0.5 3.0 1.8 6.4 7204 chr2L 12558298 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565502 intergenic not near genes chr2L_18_12560001 chr2L_12560001 RAL-837 395 chr2L 12570338 12570633 chr2L 12570439 12570708 5 99 0.0 0.0 0.0 5.0 370 chr2L 12570338 intergenic CR44598 - chr2L 12570523 intergenic CR44598 - chr2L 12570708 3` UTR CR44598 - chr2L_5_12570001 chr2L_12570001 RAL-837 396 chr2L 12653012 12653065 chr2L 12653109 12653162 10 94 3.5 3.0 3.2 2.4 150 chr2L 12653012 intergenic not near genes chr2L 12653087 intergenic not near genes chr2L 12653162 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-837 397 chr2L 12693819 12693861 chr2L 12693916 12693938 14 96 4.5 1.0 2.8 3.7 119 chr2L 12693819 exon CG6153 + chr2L 12693878 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693938 3` UTR,3` UTR CG6153 +,CG5780 - chr2L_14_12690001 chr2L_12690001 RAL-837 398 chr2L 12728902 12728946 chr2L 12729163 12729207 pogo 9 259 3.5 3.0 3.2 2.1 305 chr2L 12728902 intron MRP + chr2L 12729054 intron MRP + chr2L 12729207 exon MRP + chr2L_9_12725001 chr2L_12725001 RAL-837 399 chr2L 12731054 12731084 chr2L 12735826 12735860 F-element 10 4779 4.0 4.5 4.2 1.9 4806 chr2L 12731054 intron MRP + chr2L 12733457 intron MRP + chr2L 12735860 intron MRP + chr2L_10_12730001 chr2L_12730001 RAL-837 400 chr2L 12739162 12739202 chr2L 12743963 12743997 Doc 17 4796 4.5 7.0 5.8 2.5 4835 chr2L 12739162 exon MRP + chr2L 12741580 intron MRP + chr2L 12743997 exon MRP + chr2L_17_12740001 chr2L_12740001 RAL-837 401 chr2L 12763807 12763871 chr2L 12764039 12764056 BS 8 221 0.5 0.5 0.5 5.3 249 chr2L 12763807 intergenic not near genes chr2L 12763932 intergenic not near genes chr2L 12764056 intergenic not near genes chr2L_8_12760001 chr2L_12760001 RAL-837 402 chr2L 12766744 12766769 chr2L 12766837 12766867 4 97 5.0 5.5 5.2 0.6 123 chr2L 12766744 intergenic not near genes chr2L 12766806 intergenic not near genes chr2L 12766867 intergenic not near genes chr2L_4_12765001 chr2L_12765001 RAL-837 403 chr2L 12777329 12777388 chr2L 12777504 12777504 8 165 0.0 1.5 0.8 4.4 175 chr2L 12777329 intergenic not near genes chr2L 12777416 intergenic not near genes chr2L 12777504 intergenic not near genes chr2L_8_12775001 chr2L_12775001 RAL-837 404 chr2L 12781782 12781815 chr2L 12789252 12789285 Quasimodo 9 7466 4.0 5.0 4.5 1.6 7503 chr2L 12781782 intergenic not near genes chr2L 12785534 intergenic not near genes chr2L 12789285 intergenic not near genes chr2L_9_12785001 chr2L_12785001 RAL-837 405 chr2L 12791400 12791416 chr2L 12795309 12795327 F-element 7 3909 3.0 3.0 3.0 1.8 3927 chr2L 12791400 intergenic not near genes chr2L 12793364 intergenic not near genes chr2L 12795327 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-837 406 chr2L 12798750 12798763 chr2L 12798850 12798864 6 98 5.0 0.0 2.5 1.7 114 chr2L 12798750 intergenic not near genes chr2L 12798807 intergenic not near genes chr2L 12798864 intergenic not near genes chr2L_6_12795001 chr2L_12795001 RAL-837 407 chr2L 12798764 12798771 chr2L 12798848 12798852 4 87 5.0 0.0 2.5 1.1 88 chr2L 12798764 intergenic not near genes chr2L 12798808 intergenic not near genes chr2L 12798852 intergenic not near genes chr2L_4_12795001 chr2L_12795001 RAL-837 408 chr2L 12813443 12813482 chr2L 12813556 12813596 12 107 4.0 3.5 3.8 2.5 153 chr2L 12813443 intergenic not near genes chr2L 12813520 intergenic not near genes chr2L 12813596 intergenic not near genes chr2L_12_12810001 chr2L_12810001 RAL-837 409 chr2L 12814481 12814520 chr2L 12814584 12814623 9 102 2.0 1.5 1.8 3.2 142 chr2L 12814481 intergenic not near genes chr2L 12814552 intergenic not near genes chr2L 12814623 intergenic not near genes chr2L_9_12810001 chr2L_12810001 RAL-837 410 chr2L 12823097 12823148 chr2L 12823213 12823243 16 107 4.0 4.0 4.0 3.2 146 chr2L 12823097 intergenic kek1 - chr2L 12823170 intergenic kek1 - chr2L 12823243 intergenic kek1 - chr2L_16_12820001 chr2L_12820001 RAL-837 411 chr2L 12859255 12859295 chr2L 12859375 12859417 9 124 5.0 4.0 4.5 1.6 162 chr2L 12859255 intergenic not near genes chr2L 12859336 intergenic not near genes chr2L 12859417 intergenic not near genes chr2L_9_12855001 chr2L_12855001 RAL-837 412 chr2L 12861700 12861726 chr2L 12863177 12863213 hobo 9 1478 4.5 5.5 5.0 1.5 1513 chr2L 12861700 intergenic not near genes chr2L 12862456 intergenic not near genes chr2L 12863213 intergenic not near genes chr2L_9_12860001 chr2L_12860001 RAL-837 413 chr2L 12891494 12891525 chr2L 12891615 12891646 5 118 3.5 5.5 4.5 0.9 152 chr2L 12891494 intergenic not near genes chr2L 12891570 intergenic not near genes chr2L 12891646 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-837 414 chr2L 12894008 12894048 chr2L 12895495 12895513 hobo 6 1477 6.0 7.0 6.5 0.8 1505 chr2L 12894008 intergenic not near genes chr2L 12894760 intergenic not near genes chr2L 12895513 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-837 415 chr2L 12930480 12930491 chr2L 12930567 12930587 5 94 3.0 4.0 3.5 1.1 107 chr2L 12930480 intergenic not near genes chr2L 12930534 intergenic not near genes chr2L 12930587 intergenic not near genes chr2L_5_12930001 chr2L_12930001 RAL-837 416 chr2L 12933829 12933881 chr2L 12941316 12941368 blood 11 7486 3.5 4.0 3.8 2.3 7539 chr2L 12933829 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941368 intergenic not near genes chr2L_11_12935001 chr2L_12935001 RAL-837 417 chr2L 12944953 12944964 chr2L 12945121 12945132 6 167 2.0 1.0 1.5 2.4 179 chr2L 12944953 intergenic not near genes chr2L 12945042 intergenic not near genes chr2L 12945132 intergenic not near genes chr2L_6_12945001 chr2L_12945001 RAL-837 418 chr2L 13036226 13036264 chr2L 13036487 13036526 X-element 9 259 2.0 5.0 3.5 2.0 300 chr2L 13036226 intron CG9932 - chr2L 13036376 intron CG9932 - chr2L 13036526 intron CG9932 - chr2L_9_13035001 chr2L_13035001 RAL-837 419 chr2L 13063362 13063414 chr2L 13063459 13063486 8 88 2.0 1.0 1.5 3.2 124 chr2L 13063362 intergenic not near genes chr2L 13063424 intergenic not near genes chr2L 13063486 intergenic not near genes chr2L_8_13060001 chr2L_13060001 RAL-837 420 chr2L 13138457 13138480 chr2L 13138562 13138585 5 103 11.0 7.5 9.2 0.5 128 chr2L 13138457 intergenic not near genes chr2L 13138521 intergenic not near genes chr2L 13138585 intergenic not near genes chr2L_5_13135001 chr2L_13135001 RAL-837 421 chr2L 13138483 13138496 chr2L 13138557 13138585 5 93 6.0 6.5 6.2 0.7 102 chr2L 13138483 intergenic not near genes chr2L 13138534 intergenic not near genes chr2L 13138585 intergenic not near genes chr2L_5_13135001 chr2L_13135001 RAL-837 422 chr2L 13147734 13147741 chr2L 13147830 13147836 4 96 5.0 5.0 5.0 0.7 102 chr2L 13147734 intergenic not near genes chr2L 13147785 intergenic not near genes chr2L 13147836 intergenic not near genes chr2L_4_13145001 chr2L_13145001 RAL-837 423 chr2L 13147744 13147774 chr2L 13147825 13147838 7 79 2.0 4.0 3.0 1.8 94 chr2L 13147744 intergenic not near genes chr2L 13147791 intergenic not near genes chr2L 13147838 intergenic not near genes chr2L_7_13145001 chr2L_13145001 RAL-837 424 chr2L 13164860 13164914 chr2L 13164974 13165018 10 109 3.0 2.5 2.8 2.6 158 chr2L 13164860 exon DnaJ-H - chr2L 13164939 intron DnaJ-H - chr2L 13165018 intron DnaJ-H - chr2L_10_13160001 chr2L_13160001 RAL-837 425 chr2L 13231863 13231880 chr2L 13231994 13232011 6 130 10.0 4.5 7.2 0.7 148 chr2L 13231863 intergenic Prosalpha6T + chr2L 13231937 intergenic Prosalpha6T + chr2L 13232011 intergenic Prosalpha6T + chr2L_6_13230001 chr2L_13230001 RAL-837 426 chr2L 13231881 13231911 chr2L 13231992 13232042 6 124 4.5 4.0 4.2 1.2 161 chr2L 13231881 intergenic Prosalpha6T + chr2L 13231962 intergenic Prosalpha6T + chr2L 13232042 5` UTR Prosalpha6T + chr2L_6_13230001 chr2L_13230001 RAL-837 427 chr2L 13255273 13255297 chr2L 13255431 13255460 5 162 0.0 4.0 2.0 1.7 187 chr2L 13255273 intron CG31728 + chr2L 13255366 intron CG31728 + chr2L 13255460 exon CG31728 + chr2L_5_13255001 chr2L_13255001 RAL-837 428 chr2L 13349595 13349624 chr2L 13349722 13349751 11 123 5.0 10.0 7.5 1.3 156 chr2L 13349595 intergenic CG9395 - chr2L 13349673 intergenic CG9395 - chr2L 13349751 intergenic CG9395 - chr2L_11_13345001 chr2L_13345001 RAL-837 429 chr2L 13398699 13398748 chr2L 13398799 13398848 11 98 3.0 1.5 2.2 3.4 149 chr2L 13398699 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398774 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398848 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_11_13395001 chr2L_13395001 RAL-837 430 chr2L 13405632 13405675 chr2L 13410449 13410471 Doc 15 4813 4.5 3.5 4.0 3.0 4839 chr2L 13405632 exon CG7110 + chr2L 13408052 intron CG7110 + chr2L 13410471 intron CG7110 + chr2L_15_13405001 chr2L_13405001 RAL-837 431 chr2L 13437330 13437371 chr2L 13437431 13437432 5 93 4.5 0.0 2.2 1.6 102 chr2L 13437330 intron,intron CG42784 +,Tehao + chr2L 13437381 intron,intron CG42784 +,Tehao + chr2L 13437432 intron,intron CG42784 +,Tehao + chr2L_5_13435001 chr2L_13435001 RAL-837 432 chr2L 13449442 13449496 chr2L 13456898 13456899 Quasimodo 11 7449 6.5 5.5 6.0 1.6 7457 chr2L 13449442 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453170 intron CG42784 + chr2L 13456899 intron CG42784 + chr2L_11_13450001 chr2L_13450001 RAL-837 433 chr2L 13469134 13469180 chr2L 13469232 13469278 9 94 6.0 0.0 3.0 2.2 144 chr2L 13469134 intron CG42784 + chr2L 13469206 intron CG42784 + chr2L 13469278 intron CG42784 + chr2L_9_13465001 chr2L_13465001 RAL-837 434 chr2L 13481440 13481474 chr2L 13482067 13482077 jockey 8 622 4.5 5.5 5.0 1.3 637 chr2L 13481440 intron CG42784 + chr2L 13481758 intron CG42784 + chr2L 13482077 intron CG42784 + chr2L_8_13480001 chr2L_13480001 RAL-837 435 chr2L 13546767 13546786 chr2L 13546862 13546889 4 98 5.0 6.5 5.8 0.6 122 chr2L 13546767 intron B4 - chr2L 13546828 intron B4 - chr2L 13546889 intron B4 - chr2L_4_13545001 chr2L_13545001 RAL-837 436 chr2L 13546789 13546807 chr2L 13546861 13546905 9 93 1.5 6.5 4.0 1.8 116 chr2L 13546789 intron B4 - chr2L 13546847 intron B4 - chr2L 13546905 intron B4 - chr2L_9_13545001 chr2L_13545001 RAL-837 437 chr2L 13560383 13560420 chr2L 13565224 13565236 F-element 5 4834 4.5 2.0 3.2 1.2 4853 chr2L 13560383 intron kuz + chr2L 13562810 intron kuz + chr2L 13565236 intron kuz + chr2L_5_13560001 chr2L_13560001 RAL-837 438 chr2L 13622197 13622233 chr2L 13622321 13622335 9 111 2.0 6.0 4.0 1.8 138 chr2L 13622197 intron kuz + chr2L 13622266 intron kuz + chr2L 13622335 intron kuz + chr2L_9_13620001 chr2L_13620001 RAL-837 439 chr2L 13676678 13676970 chr2L 13676777 13677041 22 96 5.5 1.5 3.5 4.9 363 chr2L 13676678 intergenic CG31814 - chr2L 13676860 3` UTR CG31814 - chr2L 13677041 3` UTR CG31814 - chr2L_22_13675001 chr2L_13675001 RAL-837 440 chr2L 13693473 13693492 chr2L 13693599 13693618 4 124 8.5 4.5 6.5 0.5 145 chr2L 13693473 intron CG31814 - chr2L 13693546 intron CG31814 - chr2L 13693618 intron CG31814 - chr2L_4_13690001 chr2L_13690001 RAL-837 441 chr2L 13693495 13693517 chr2L 13693586 13693643 9 114 5.0 2.0 3.5 2.0 148 chr2L 13693495 intron CG31814 - chr2L 13693569 intron CG31814 - chr2L 13693643 intron CG31814 - chr2L_9_13690001 chr2L_13690001 RAL-837 442 chr2L 13713543 13713572 chr2L 13713639 13713653 8 94 3.5 2.5 3.0 2.0 110 chr2L 13713543 intron CG31814 - chr2L 13713598 intron CG31814 - chr2L 13713653 intron CG31814 - chr2L_8_13710001 chr2L_13710001 RAL-837 443 chr2L 13749192 13749202 chr2L 13749295 13749304 7 103 0.0 0.0 0.0 7.0 112 chr2L 13749192 intron,intron CR44846 +,TM9SF4 + chr2L 13749248 intron,intron CR44846 +,TM9SF4 + chr2L 13749304 intron,intron CR44846 +,TM9SF4 + chr2L_7_13745001 chr2L_13745001 RAL-837 444 chr2L 13761266 13761316 chr2L 13761369 13761402 5 96 3.0 2.5 2.8 1.3 136 chr2L 13761266 intron TM9SF4 + chr2L 13761334 intron TM9SF4 + chr2L 13761402 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-837 445 chr2L 13761805 13761818 chr2L 13762925 13762949 Doc 5 1127 8.0 6.0 7.0 0.6 1144 chr2L 13761805 intron TM9SF4 + chr2L 13762377 intron TM9SF4 + chr2L 13762949 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-837 446 chr2L 13800163 13800206 chr2L 13800287 13800325 10 123 4.5 6.0 5.2 1.6 162 chr2L 13800163 intergenic Sec71 + chr2L 13800244 intergenic not near genes chr2L 13800325 intergenic not near genes chr2L_10_13800001 chr2L_13800001 RAL-837 447 chr2L 13853070 13853111 chr2L 13862239 13862279 roo 18 9169 4.0 2.0 3.0 4.5 9209 chr2L 13853070 intron CenG1A + chr2L 13857674 intron CenG1A + chr2L 13862279 intron CenG1A + chr2L_18_13855001 chr2L_13855001 RAL-837 448 chr2L 13914808 13914842 chr2L 13914892 13914942 9 97 2.5 2.0 2.2 2.8 134 chr2L 13914808 5` UTR Ance-3 + chr2L 13914875 5` UTR Ance-3 + chr2L 13914942 5` UTR Ance-3 + chr2L_9_13910001 chr2L_13910001 RAL-837 449 chr2L 13973685 13973696 chr2L 13973783 13973800 7 102 2.0 2.5 2.2 2.2 115 chr2L 13973685 3` UTR NimC1 - chr2L 13973742 3` UTR NimC1 - chr2L 13973800 3` UTR NimC1 - chr2L_7_13970001 chr2L_13970001 RAL-837 450 chr2L 13988264 13988287 chr2L 13988371 13988394 6 105 5.5 4.5 5.0 1.0 130 chr2L 13988264 intron rk - chr2L 13988329 intron rk - chr2L 13988394 intron rk - chr2L_6_13985001 chr2L_13985001 RAL-837 451 chr2L 14121073 14121110 chr2L 14121179 14121216 13 105 5.0 6.0 5.5 2.0 143 chr2L 14121073 intergenic not near genes chr2L 14121144 intergenic not near genes chr2L 14121216 intergenic not near genes chr2L_13_14120001 chr2L_14120001 RAL-837 452 chr2L 14135219 14135236 chr2L 14135320 14135332 6 99 6.5 0.5 3.5 1.3 113 chr2L 14135219 intron CG17341 + chr2L 14135276 intron CG17341 + chr2L 14135332 intron CG17341 + chr2L_6_14135001 chr2L_14135001 RAL-837 453 chr2L 14144848 14144859 chr2L 14144914 14144935 4 70 6.5 3.0 4.8 0.7 87 chr2L 14144848 intron CG17341 + chr2L 14144892 intron CG17341 + chr2L 14144935 intron CG17341 + chr2L_4_14140001 chr2L_14140001 RAL-837 454 chr2L 14300175 14300190 chr2L 14300272 14300281 5 96 6.0 9.0 7.5 0.6 106 chr2L 14300175 intron wb + chr2L 14300228 intron wb + chr2L 14300281 intron wb + chr2L_5_14300001 chr2L_14300001 RAL-837 455 chr2L 14300194 14300200 chr2L 14300267 14300296 4 88 5.5 8.5 7.0 0.5 102 chr2L 14300194 intron wb + chr2L 14300245 intron wb + chr2L 14300296 intron wb + chr2L_4_14300001 chr2L_14300001 RAL-837 456 chr2L 14374761 14374780 chr2L 14374872 14374891 7 111 3.5 3.0 3.2 1.7 130 chr2L 14374761 intergenic not near genes chr2L 14374826 intergenic not near genes chr2L 14374891 intergenic not near genes chr2L_7_14370001 chr2L_14370001 RAL-837 457 chr2L 14378650 14378652 chr2L 14378729 14378751 5 95 5.0 0.0 2.5 1.4 101 chr2L 14378650 3` UTR ppk - chr2L 14378700 3` UTR ppk - chr2L 14378751 3` UTR ppk - chr2L_5_14375001 chr2L_14375001 RAL-837 458 chr2L 14378654 14378665 chr2L 14378726 14378740 4 83 3.5 0.0 1.8 1.4 86 chr2L 14378654 3` UTR ppk - chr2L 14378697 3` UTR ppk - chr2L 14378740 3` UTR ppk - chr2L_4_14375001 chr2L_14375001 RAL-837 459 chr2L 14427492 14427509 chr2L 14427605 14427615 4 115 0.0 3.5 1.8 1.4 123 chr2L 14427492 intergenic not near genes chr2L 14427554 intergenic not near genes chr2L 14427615 intergenic not near genes chr2L_4_14425001 chr2L_14425001 RAL-837 460 chr2L 14427513 14427528 chr2L 14427601 14427649 5 114 0.0 3.0 1.5 2.0 136 chr2L 14427513 intergenic not near genes chr2L 14427581 intergenic not near genes chr2L 14427649 intergenic not near genes chr2L_5_14425001 chr2L_14425001 RAL-837 461 chr2L 14465566 14465616 chr2L 14469049 14469113 hopper2 4 3475 5.0 0.0 2.5 1.1 3547 chr2L 14465566 intergenic not near genes chr2L 14467340 intergenic not near genes chr2L 14469113 intergenic not near genes chr2L_4_14465001 chr2L_14465001 RAL-837 462 chr2L 14510538 14510561 chr2L 14510643 14510683 5 119 4.5 3.5 4.0 1.0 145 chr2L 14510538 3` UTR CR45693 - chr2L 14510610 3` UTR CR45693 - chr2L 14510683 3` UTR CR45693 - chr2L_5_14510001 chr2L_14510001 RAL-837 463 chr2L 14527036 14527054 chr2L 14527141 14527165 4 112 4.0 1.5 2.8 1.1 129 chr2L 14527036 intergenic not near genes chr2L 14527100 intergenic not near genes chr2L 14527165 intergenic not near genes chr2L_4_14525001 chr2L_14525001 RAL-837 464 chr2L 14554149 14554174 chr2L 14554246 14554271 9 93 8.0 5.0 6.5 1.2 122 chr2L 14554149 intergenic not near genes chr2L 14554210 intergenic not near genes chr2L 14554271 intergenic not near genes chr2L_9_14550001 chr2L_14550001 RAL-837 465 chr2L 14554184 14554198 chr2L 14554241 14554291 6 82 4.5 4.0 4.2 1.2 107 chr2L 14554184 intergenic not near genes chr2L 14554238 intergenic not near genes chr2L 14554291 intergenic not near genes chr2L_6_14550001 chr2L_14550001 RAL-837 466 chr2L 14565912 14565958 chr2L 14566297 14566343 7 375 3.5 1.0 2.2 2.2 431 chr2L 14565912 intergenic not near genes chr2L 14566128 intergenic not near genes chr2L 14566343 intergenic not near genes chr2L_7_14565001 chr2L_14565001 RAL-837 467 chr2L 14588364 14588419 chr2L 14588538 14588577 14 164 1.5 2.0 1.8 5.0 213 chr2L 14588364 intergenic CG42680 - chr2L 14588470 intergenic CG42680 - chr2L 14588577 intergenic CG42680 - chr2L_14_14585001 chr2L_14585001 RAL-837 468 chr2L 14601966 14601974 chr2L 14602070 14602071 6 103 8.0 5.0 6.5 0.8 105 chr2L 14601966 exon osp - chr2L 14602018 intron osp - chr2L 14602071 intron osp - chr2L_6_14600001 chr2L_14600001 RAL-837 469 chr2L 14601985 14602000 chr2L 14602064 14602104 6 96 3.5 4.5 4.0 1.2 119 chr2L 14601985 exon osp - chr2L 14602044 intron osp - chr2L 14602104 intron osp - chr2L_6_14600001 chr2L_14600001 RAL-837 470 chr2L 14707195 14707236 chr2L 14707334 14707375 9 139 3.0 1.5 2.2 2.8 180 chr2L 14707195 intergenic not near genes chr2L 14707285 intergenic not near genes chr2L 14707375 intergenic not near genes chr2L_9_14705001 chr2L_14705001 RAL-837 471 chr2L 14715535 14715564 chr2L 14715626 14715675 9 101 3.5 5.0 4.2 1.7 140 chr2L 14715535 intergenic not near genes chr2L 14715605 intergenic not near genes chr2L 14715675 intergenic not near genes chr2L_9_14715001 chr2L_14715001 RAL-837 472 chr2L 14769893 14769910 chr2L 14769995 14770012 8 102 4.0 5.5 4.8 1.4 119 chr2L 14769893 intergenic not near genes chr2L 14769952 intergenic not near genes chr2L 14770012 intergenic not near genes chr2L_8_14765001 chr2L_14765001 RAL-837 473 chr2L 14774209 14774261 chr2L 14774444 14774498 12 226 4.5 4.0 4.2 2.3 289 chr2L 14774209 3` UTR CG4650 - chr2L 14774354 3` UTR CG4650 - chr2L 14774498 3` UTR CG4650 - chr2L_12_14770001 chr2L_14770001 RAL-837 474 chr2L 14803866 14803907 chr2L 14809089 14809105 copia 12 5217 4.0 6.5 5.2 1.9 5239 chr2L 14803866 intergenic not near genes chr2L 14806486 intergenic not near genes chr2L 14809105 intergenic not near genes chr2L_12_14805001 chr2L_14805001 RAL-837 475 chr2L 14840955 14841009 chr2L 14841063 14841091 13 96 0.0 3.0 1.5 5.2 136 chr2L 14840955 3` UTR CR43805 - chr2L 14841023 3` UTR CR43805 - chr2L 14841091 3` UTR CR43805 - chr2L_13_14840001 chr2L_14840001 RAL-837 476 chr2L 14854948 14854989 chr2L 14855035 14855087 11 92 4.0 4.0 4.0 2.2 139 chr2L 14854948 intergenic not near genes chr2L 14855018 intergenic not near genes chr2L 14855087 intergenic not near genes chr2L_11_14855001 chr2L_14855001 RAL-837 477 chr2L 14889948 14889976 chr2L 14890393 14890421 jockey 6 441 3.0 4.5 3.8 1.2 473 chr2L 14889948 intergenic not near genes chr2L 14890184 intergenic not near genes chr2L 14890421 intergenic not near genes chr2L_6_14890001 chr2L_14890001 RAL-837 478 chr2L 14984376 14984391 chr2L 14991998 14992011 opus 6 7620 6.5 10.5 8.5 0.6 7635 chr2L 14984376 intron mol - chr2L 14988194 intron mol - chr2L 14992011 intron mol - chr2L_6_14985001 chr2L_14985001 RAL-837 479 chr2L 15014605 15014653 chr2L 15014704 15014752 6 97 0.0 3.0 1.5 2.4 147 chr2L 15014605 intergenic not near genes chr2L 15014678 intergenic not near genes chr2L 15014752 intergenic not near genes chr2L_6_15010001 chr2L_15010001 RAL-837 480 chr2L 15078051 15078102 chr2L 15078159 15078210 15 104 1.0 4.0 2.5 4.3 159 chr2L 15078051 intron CG15270 + chr2L 15078130 intron CG15270 + chr2L 15078210 intron CG15270 + chr2L_15_15075001 chr2L_15075001 RAL-837 481 chr2L 15102766 15102791 chr2L 15102873 15102881 5 103 0.0 13.0 6.5 0.7 115 chr2L 15102766 intergenic not near genes chr2L 15102824 intergenic not near genes chr2L 15102881 intergenic not near genes chr2L_5_15100001 chr2L_15100001 RAL-837 482 chr2L 15103838 15103858 chr2L 15103955 15103963 6 114 10.5 7.0 8.8 0.6 125 chr2L 15103838 intergenic not near genes chr2L 15103900 intergenic not near genes chr2L 15103963 intergenic not near genes chr2L_6_15100001 chr2L_15100001 RAL-837 483 chr2L 15135237 15135286 chr2L 15135348 15135390 8 105 3.0 0.5 1.8 2.9 153 chr2L 15135237 intergenic not near genes chr2L 15135314 intergenic not near genes chr2L 15135390 intergenic not near genes chr2L_8_15135001 chr2L_15135001 RAL-837 484 chr2L 15138767 15138803 chr2L 15138862 15138910 4 102 0.0 4.0 2.0 1.3 143 chr2L 15138767 intergenic not near genes chr2L 15138838 intergenic not near genes chr2L 15138910 intergenic not near genes chr2L_4_15135001 chr2L_15135001 RAL-837 485 chr2L 15186248 15186273 chr2L 15186380 15186397 6 137 4.0 4.0 4.0 1.2 149 chr2L 15186248 intron CG4168 - chr2L 15186322 intron CG4168 - chr2L 15186397 intron CG4168 - chr2L_6_15185001 chr2L_15185001 RAL-837 486 chr2L 15192200 15192250 chr2L 15192344 15192363 13 135 3.0 2.0 2.5 3.7 163 chr2L 15192200 intron CG4168 - chr2L 15192282 intron CG4168 - chr2L 15192363 intron CG4168 - chr2L_13_15190001 chr2L_15190001 RAL-837 487 chr2L 15225285 15225328 chr2L 15226154 15226167 4 862 2.5 3.0 2.8 1.1 882 chr2L 15225285 intergenic not near genes chr2L 15225726 intergenic not near genes chr2L 15226167 intergenic not near genes chr2L_4_15225001 chr2L_15225001 RAL-837 488 chr2L 15226358 15226379 chr2L 15226454 15226468 6 93 5.5 6.5 6.0 0.9 110 chr2L 15226358 intergenic not near genes chr2L 15226413 intergenic not near genes chr2L 15226468 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-837 489 chr2L 15324579 15324610 chr2L 15324677 15324705 6 96 10.5 3.5 7.0 0.8 126 chr2L 15324579 intergenic not near genes chr2L 15324642 intergenic not near genes chr2L 15324705 intergenic not near genes chr2L_6_15320001 chr2L_15320001 RAL-837 490 chr2L 15357764 15357810 chr2L 15357877 15357923 12 110 4.0 5.0 4.5 2.2 159 chr2L 15357764 intergenic not near genes chr2L 15357844 intergenic not near genes chr2L 15357923 intergenic not near genes chr2L_12_15355001 chr2L_15355001 RAL-837 491 chr2L 15427313 15427364 chr2L 15427429 15427480 6 116 2.5 1.0 1.8 2.1 167 chr2L 15427313 intergenic not near genes chr2L 15427396 intergenic not near genes chr2L 15427480 intergenic not near genes chr2L_6_15425001 chr2L_15425001 RAL-837 492 chr2L 15439323 15439345 chr2L 15439420 15439442 7 95 4.0 1.5 2.8 1.8 119 chr2L 15439323 intergenic not near genes chr2L 15439382 intergenic not near genes chr2L 15439442 intergenic not near genes chr2L_7_15435001 chr2L_15435001 RAL-837 493 chr2L 15442262 15442296 chr2L 15442367 15442382 7 98 4.0 0.0 2.0 2.3 120 chr2L 15442262 5` UTR CR44862 + chr2L 15442322 intergenic CR44862 + chr2L 15442382 intergenic CR44862 + chr2L_7_15440001 chr2L_15440001 RAL-837 494 chr2L 15445635 15445676 chr2L 15445736 15445736 7 95 3.0 2.5 2.8 1.8 101 chr2L 15445635 intergenic not near genes chr2L 15445686 intergenic not near genes chr2L 15445736 intergenic not near genes chr2L_7_15445001 chr2L_15445001 RAL-837 495 chr2L 15446046 15446082 chr2L 15453519 15453571 blood 7 7487 2.5 1.5 2.0 2.3 7525 chr2L 15446046 intergenic not near genes chr2L 15449808 intergenic not near genes chr2L 15453571 intergenic not near genes chr2L_7_15445001 chr2L_15445001 RAL-837 496 chr2L 15482570 15482603 chr2L 15482716 15482759 6 154 1.0 4.5 2.8 1.6 189 chr2L 15482570 intergenic not near genes chr2L 15482664 intergenic not near genes chr2L 15482759 intergenic not near genes chr2L_6_15480001 chr2L_15480001 RAL-837 497 chr2L 15483269 15483309 chr2L 15483375 15483415 10 104 2.5 3.5 3.0 2.5 146 chr2L 15483269 intergenic not near genes chr2L 15483342 intergenic not near genes chr2L 15483415 intergenic not near genes chr2L_10_15480001 chr2L_15480001 RAL-837 498 chr2L 15499905 15499936 chr2L 15500008 15500043 4 106 1.5 4.5 3.0 1.0 138 chr2L 15499905 intron lace + chr2L 15499974 intron lace + chr2L 15500043 intron lace + chr2L_4_15495001 chr2L_15495001 RAL-837 499 chr2L 15586396 15586428 chr2L 15593468 15593481 297 7 7069 4.5 2.5 3.5 1.6 7085 chr2L 15586396 intergenic not near genes chr2L 15589938 intergenic not near genes chr2L 15593481 intergenic not near genes chr2L_7_15585001 chr2L_15585001 RAL-837 500 chr2L 15598772 15598788 chr2L 15598848 15598889 4 97 2.0 4.0 3.0 1.0 117 chr2L 15598772 intergenic not near genes chr2L 15598830 intergenic not near genes chr2L 15598889 intergenic not near genes chr2L_4_15595001 chr2L_15595001 RAL-837 501 chr2L 15610670 15610716 chr2L 15613560 15613588 11 2878 28.5 26.0 27.2 0.4 2918 chr2L 15610670 3` UTR,5` UTR CG15255 -,CR44865 + chr2L 15612129 intergenic CG11864 -,CG15255 - chr2L 15613588 intergenic CG11864 -,CG15254 - chr2L_11_15610001 chr2L_15610001 RAL-837 502 chr2L 15732493 15732541 chr2L 15732608 15732656 13 112 3.5 6.0 4.8 2.2 163 chr2L 15732493 intron CycE - chr2L 15732574 intron CycE - chr2L 15732656 intron CycE - chr2L_13_15730001 chr2L_15730001 RAL-837 503 chr2L 15740877 15740919 chr2L 15740975 15741017 9 96 3.0 5.0 4.0 1.8 140 chr2L 15740877 5` UTR CycE - chr2L 15740947 intron CycE - chr2L 15741017 intron CycE - chr2L_9_15740001 chr2L_15740001 RAL-837 504 chr2L 15821073 15821080 chr2L 15821156 15821200 4 111 0.0 2.5 1.2 1.8 127 chr2L 15821073 intergenic not near genes chr2L 15821136 intergenic not near genes chr2L 15821200 intergenic not near genes chr2L_4_15820001 chr2L_15820001 RAL-837 505 chr2L 15825142 15825188 chr2L 15832658 15832704 Tabor 11 7514 5.0 5.0 5.0 1.8 7562 chr2L 15825142 intergenic not near genes chr2L 15828923 intergenic not near genes chr2L 15832704 intergenic not near genes chr2L_11_15825001 chr2L_15825001 RAL-837 506 chr2L 15877250 15877281 chr2L 15877346 15877361 4 90 6.5 2.0 4.2 0.8 111 chr2L 15877250 3` UTR CG7653 - chr2L 15877306 3` UTR CG7653 - chr2L 15877361 3` UTR CG7653 - chr2L_4_15875001 chr2L_15875001 RAL-837 507 chr2L 15886924 15886972 chr2L 15887032 15887080 10 108 3.5 3.0 3.2 2.4 156 chr2L 15886924 intergenic not near genes chr2L 15887002 intergenic not near genes chr2L 15887080 intergenic not near genes chr2L_10_15885001 chr2L_15885001 RAL-837 508 chr2L 15906164 15906213 chr2L 15906273 15906297 11 97 3.5 1.0 2.2 3.4 133 chr2L 15906164 intron beat-Ib - chr2L 15906230 intron beat-Ib - chr2L 15906297 intron beat-Ib - chr2L_11_15905001 chr2L_15905001 RAL-837 509 chr2L 15907317 15907367 chr2L 15907692 15907742 12 373 2.5 4.0 3.2 2.9 425 chr2L 15907317 intron beat-Ib - chr2L 15907530 intron beat-Ib - chr2L 15907742 intron beat-Ib - chr2L_12_15905001 chr2L_15905001 RAL-837 510 chr2L 15930884 15930940 chr2L 15930996 15931042 9 108 6.0 3.0 4.5 1.6 158 chr2L 15930884 intron beat-Ib - chr2L 15930963 intron beat-Ib - chr2L 15931042 intron beat-Ib - chr2L_9_15930001 chr2L_15930001 RAL-837 511 chr2L 15935172 15935221 chr2L 15935281 15935330 7 102 3.0 0.5 1.8 2.5 158 chr2L 15935172 intron beat-Ib - chr2L 15935251 intron beat-Ib - chr2L 15935330 intron beat-Ib - chr2L_7_15935001 chr2L_15935001 RAL-837 512 chr2L 15950366 15950412 chr2L 15950464 15950510 4 87 0.5 1.0 0.8 2.2 144 chr2L 15950366 intron beat-Ib - chr2L 15950438 intron beat-Ib - chr2L 15950510 intron beat-Ib - chr2L_4_15950001 chr2L_15950001 RAL-837 513 chr2L 15956018 15956026 chr2L 15957495 15957513 hobo 5 1484 4.5 5.5 5.0 0.8 1495 chr2L 15956018 intron beat-Ib - chr2L 15956766 intron beat-Ib - chr2L 15957513 intron beat-Ib - chr2L_5_15955001 chr2L_15955001 RAL-837 514 chr2L 15956027 15956054 chr2L 15957488 15957517 hobo 13 1476 1.0 3.5 2.2 4.1 1490 chr2L 15956027 intron beat-Ib - chr2L 15956772 intron beat-Ib - chr2L 15957517 intron beat-Ib - chr2L_13_15955001 chr2L_15955001 RAL-837 515 chr2L 16001443 16001494 chr2L 16001551 16001602 9 102 0.5 4.0 2.2 2.8 159 chr2L 16001443 intron beat-Ic + chr2L 16001522 intron beat-Ic + chr2L 16001602 intron beat-Ic + chr2L_9_16000001 chr2L_16000001 RAL-837 516 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 9 145889 13.0 18.5 15.8 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_16140001 chr2L_16140001 RAL-837 517 chr2L 16098905 16098950 chr2L 16099013 16099036 11 103 2.0 4.5 3.2 2.6 131 chr2L 16098905 intergenic not near genes chr2L 16098970 intergenic not near genes chr2L 16099036 intergenic not near genes chr2L_11_16095001 chr2L_16095001 RAL-837 518 chr2L 16141162 16141170 chr2L 16146376 16146397 copia 5 5223 5.5 4.5 5.0 0.8 5235 chr2L 16141162 intergenic not near genes chr2L 16143780 intergenic not near genes chr2L 16146397 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-837 519 chr2L 16141172 16141193 chr2L 16146373 16146420 copia 7 5222 4.5 3.5 4.0 1.4 5248 chr2L 16141172 intergenic not near genes chr2L 16143796 intergenic not near genes chr2L 16146420 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-837 520 chr2L 16146679 16146730 chr2L 16146782 16146833 9 96 1.0 2.5 1.8 3.2 154 chr2L 16146679 intergenic not near genes chr2L 16146756 intergenic not near genes chr2L 16146833 intergenic not near genes chr2L_9_16145001 chr2L_16145001 RAL-837 521 chr2L 16153718 16153747 chr2L 16160790 16160821 297 4 7067 7.0 3.5 5.2 0.6 7103 chr2L 16153718 intergenic not near genes chr2L 16157270 intergenic not near genes chr2L 16160821 intergenic not near genes chr2L_4_16155001 chr2L_16155001 RAL-837 522 chr2L 9084337 9084340 chr2L 16217660 16217660 6 7133321 12.0 18.5 15.2 0.4 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_12650001 chr2L_12650001 RAL-837 523 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 4 145889 13.0 18.5 15.8 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-837 524 chr2L 16224782 16224832 chr2L 16224912 16224932 9 125 6.0 2.0 4.0 1.8 150 chr2L 16224782 intergenic not near genes chr2L 16224857 intergenic not near genes chr2L 16224932 intergenic not near genes chr2L_9_16220001 chr2L_16220001 RAL-837 525 chr2L 16243682 16243843 chr2L 16243780 16243958 12 106 5.5 4.0 4.8 2.1 276 chr2L 16243682 exon CG42818 + chr2L 16243820 exon CG42818 + chr2L 16243958 exon CG42818 + chr2L_12_16240001 chr2L_16240001 RAL-837 526 chr2L 16280235 16280278 chr2L 16281426 16281469 1360 12 1188 2.5 4.0 3.2 2.9 1234 chr2L 16280235 intron crp - chr2L 16280852 intron crp - chr2L 16281469 intron crp - chr2L_12_16280001 chr2L_16280001 RAL-837 527 chr2L 16354759 16354782 chr2L 16354871 16354894 4 112 2.5 3.5 3.0 1.0 135 chr2L 16354759 intergenic CaBP1 -,CG4455 + chr2L 16354826 intergenic CaBP1 -,CG4455 + chr2L 16354894 3` UTR CaBP1 - chr2L_4_16350001 chr2L_16350001 RAL-837 528 chr2L 16363955 16363969 chr2L 16364191 16364235 6 256 4.5 3.0 3.8 1.2 280 chr2L 16363955 intergenic not near genes chr2L 16364095 intergenic not near genes chr2L 16364235 intergenic not near genes chr2L_6_16360001 chr2L_16360001 RAL-837 529 chr2L 16375374 16375403 chr2L 16375485 16375508 7 109 6.5 0.0 3.2 1.7 134 chr2L 16375374 intergenic not near genes chr2L 16375441 intergenic not near genes chr2L 16375508 intergenic not near genes chr2L_7_16375001 chr2L_16375001 RAL-837 530 chr2L 16434094 16434131 chr2L 16434189 16434233 6 99 3.5 1.5 2.5 1.7 139 chr2L 16434094 intron CG5888 - chr2L 16434164 intron CG5888 - chr2L 16434233 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-837 531 chr2L 16480121 16480156 chr2L 16480549 16480584 6 428 4.5 5.5 5.0 1.0 463 chr2L 16480121 intron dac - chr2L 16480352 intron dac - chr2L 16480584 intron dac - chr2L_6_16480001 chr2L_16480001 RAL-837 532 chr2L 16480164 16480168 chr2L 16480546 16480550 4 405 2.5 5.5 4.0 0.8 386 chr2L 16480164 intron dac - chr2L 16480357 intron dac - chr2L 16480550 intron dac - chr2L_4_16480001 chr2L_16480001 RAL-837 533 chr2L 16494249 16494258 chr2L 16494359 16494368 4 110 6.5 5.0 5.8 0.6 119 chr2L 16494249 intron Tpr2 + chr2L 16494308 intron Tpr2 + chr2L 16494368 intron Tpr2 + chr2L_4_16490001 chr2L_16490001 RAL-837 534 chr2L 16494260 16494268 chr2L 16494356 16494367 5 99 3.5 4.0 3.8 1.0 107 chr2L 16494260 intron Tpr2 + chr2L 16494314 intron Tpr2 + chr2L 16494367 intron Tpr2 + chr2L_5_16490001 chr2L_16490001 RAL-837 535 chr2L 16494274 16494294 chr2L 16494355 16494404 7 100 2.0 4.0 3.0 1.8 130 chr2L 16494274 intron Tpr2 + chr2L 16494339 intron Tpr2 + chr2L 16494404 intron Tpr2 + chr2L_7_16490001 chr2L_16490001 RAL-837 536 chr2L 16498159 16498188 chr2L 16498339 16498357 6 189 1.5 4.0 2.8 1.6 198 chr2L 16498159 intron Tpr2 + chr2L 16498258 intron Tpr2 + chr2L 16498357 intron Tpr2 + chr2L_6_16495001 chr2L_16495001 RAL-837 537 chr2L 16504982 16505013 chr2L 16505112 16505143 5 130 0.5 5.0 2.8 1.3 161 chr2L 16504982 intron Tpr2 + chr2L 16505062 intron Tpr2 + chr2L 16505143 intron Tpr2 + chr2L_5_16505001 chr2L_16505001 RAL-837 538 chr2L 16511965 16511990 chr2L 16519112 16519127 HMS-Beagle 6 7145 2.5 2.5 2.5 1.7 7162 chr2L 16511965 intron CG5953 - chr2L 16515546 intron CG5953 - chr2L 16519127 intron CG5953 - chr2L_6_16515001 chr2L_16515001 RAL-837 539 chr2L 16548463 16548486 chr2L 16548604 16548627 5 141 1.5 0.0 0.8 2.8 164 chr2L 16548463 intron CG42389 + chr2L 16548545 intron CG42389 + chr2L 16548627 intron CG42389 + chr2L_5_16545001 chr2L_16545001 RAL-837 540 chr2L 16589798 16589827 chr2L 16589908 16589936 9 110 4.0 4.0 4.0 1.8 138 chr2L 16589798 intron CG42389 + chr2L 16589867 intron CG42389 + chr2L 16589936 intron CG42389 + chr2L_9_16585001 chr2L_16585001 RAL-837 541 chr2L 16592090 16592121 chr2L 16592315 16592346 7 225 1.0 4.0 2.5 2.0 256 chr2L 16592090 intron CG42389 + chr2L 16592218 intron CG42389 + chr2L 16592346 intron CG42389 + chr2L_7_16590001 chr2L_16590001 RAL-837 542 chr2L 16709059 16709098 chr2L 16709163 16709202 9 101 6.0 8.5 7.2 1.1 143 chr2L 16709059 intron CG31808 - chr2L 16709130 intron CG31808 - chr2L 16709202 intron CG31808 - chr2L_9_16705001 chr2L_16705001 RAL-837 543 chr2L 16728909 16728955 chr2L 16729562 16729610 9 652 0.5 4.0 2.2 2.8 701 chr2L 16728909 intergenic not near genes chr2L 16729260 intergenic not near genes chr2L 16729610 intergenic CG31812 + chr2L_9_16725001 chr2L_16725001 RAL-837 544 chr2L 16958100 16958133 chr2L 16962902 16962941 Doc 13 4805 4.0 7.0 5.5 2.0 4841 chr2L 16958100 intergenic not near genes chr2L 16960520 intergenic not near genes chr2L 16962941 intergenic not near genes chr2L_13_16960001 chr2L_16960001 RAL-837 545 chr2L 17032505 17032510 chr2L 17032587 17032615 4 99 2.5 3.0 2.8 1.1 110 chr2L 17032505 intergenic not near genes chr2L 17032560 intergenic not near genes chr2L 17032615 intergenic not near genes chr2L_4_17030001 chr2L_17030001 RAL-837 546 chr2L 17033912 17033946 chr2L 17034001 17034052 6 95 3.5 2.5 3.0 1.5 140 chr2L 17033912 intergenic not near genes chr2L 17033982 intergenic not near genes chr2L 17034052 intergenic not near genes chr2L_6_17030001 chr2L_17030001 RAL-837 547 chr2L 17052406 17052443 chr2L 17052531 17052559 12 126 1.5 1.5 1.5 4.8 153 chr2L 17052406 intergenic not near genes chr2L 17052482 intergenic not near genes chr2L 17052559 intergenic not near genes chr2L_12_17050001 chr2L_17050001 RAL-837 548 chr2L 17087363 17087402 chr2L 17087501 17087540 5 138 3.0 8.0 5.5 0.8 177 chr2L 17087363 intergenic CG12620 + chr2L 17087452 intergenic CG12620 + chr2L 17087540 intergenic CG12620 + chr2L_5_17085001 chr2L_17085001 RAL-837 549 chr2L 17101910 17101916 chr2L 17101991 17101997 9 90 2.0 4.5 3.2 2.1 87 chr2L 17101910 intergenic not near genes chr2L 17101954 intergenic not near genes chr2L 17101997 intergenic not near genes chr2L_9_17100001 chr2L_17100001 RAL-837 550 chr2L 17120822 17120872 chr2L 17120921 17120953 9 96 3.0 2.5 2.8 2.4 131 chr2L 17120822 intergenic not near genes chr2L 17120888 intergenic not near genes chr2L 17120953 intergenic not near genes chr2L_9_17120001 chr2L_17120001 RAL-837 551 chr2L 17156656 17156683 chr2L 17156764 17156791 12 107 6.0 3.5 4.8 2.1 135 chr2L 17156656 intron,intron CG34106 +,beat-IIIa + chr2L 17156724 intron,intron CG34106 +,beat-IIIa + chr2L 17156791 intron,intron CG34106 +,beat-IIIa + chr2L_12_17155001 chr2L_17155001 RAL-837 552 chr2L 17156687 17156706 chr2L 17156795 17156814 5 108 2.5 4.5 3.5 1.1 127 chr2L 17156687 intron,intron CG34106 +,beat-IIIa + chr2L 17156750 intron,intron CG34106 +,beat-IIIa + chr2L 17156814 intron,intron CG34106 +,beat-IIIa + chr2L_5_17155001 chr2L_17155001 RAL-837 553 chr2L 17158714 17158744 chr2L 17158834 17158866 6 122 3.5 1.0 2.2 1.9 152 chr2L 17158714 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158790 intron,intron CG34106 +,beat-IIIa + chr2L 17158866 intron,intron CG34106 +,beat-IIIa + chr2L_6_17155001 chr2L_17155001 RAL-837 554 chr2L 17158745 17158762 chr2L 17158831 17158884 4 113 1.0 1.0 1.0 2.0 139 chr2L 17158745 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158814 intron,intron CG34106 +,beat-IIIa + chr2L 17158884 intron,intron CG34106 +,beat-IIIa + chr2L_4_17155001 chr2L_17155001 RAL-837 555 chr2L 17167545 17167595 chr2L 17167805 17167854 pogo 7 259 2.5 4.5 3.5 1.6 309 chr2L 17167545 intron,intron CG34106 +,beat-IIIa + chr2L 17167700 intron,intron CG34106 +,beat-IIIa + chr2L 17167854 intron,intron CG34106 +,beat-IIIa + chr2L_7_17165001 chr2L_17165001 RAL-837 556 chr2L 17172994 17173047 chr2L 17173247 17173294 15 250 4.0 5.0 4.5 2.7 300 chr2L 17172994 3` UTR,3` UTR CG34106 +,beat-IIIa + chr2L 17173144 intergenic CG34106 +,beat-IIIa +,CG34169 + chr2L 17173294 intergenic CG34106 +,beat-IIIa +,CG34169 + chr2L_15_17170001 chr2L_17170001 RAL-837 557 chr2L 17199141 17199184 chr2L 17200628 17200671 hobo 9 1483 4.0 2.5 3.2 2.1 1530 chr2L 17199141 intron beat-IIIc - chr2L 17199906 intron beat-IIIc - chr2L 17200671 intron beat-IIIc - chr2L_9_17195001 chr2L_17195001 RAL-837 558 chr2L 17233464 17233495 chr2L 17233565 17233598 5 102 1.5 1.0 1.2 2.3 134 chr2L 17233464 intron beat-IIIc - chr2L 17233531 intron beat-IIIc - chr2L 17233598 intron beat-IIIc - chr2L_5_17230001 chr2L_17230001 RAL-837 559 chr2L 17250375 17250424 chr2L 17250488 17250539 8 113 1.5 2.5 2.0 2.7 164 chr2L 17250375 intron beat-IIIc - chr2L 17250457 intron beat-IIIc - chr2L 17250539 intron beat-IIIc - chr2L_8_17250001 chr2L_17250001 RAL-837 560 chr2L 17273181 17273217 chr2L 17277974 17278015 F-element 11 4797 5.5 1.5 3.5 2.4 4834 chr2L 17273181 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278015 intergenic not near genes chr2L_11_17275001 chr2L_17275001 RAL-837 561 chr2L 17303440 17303468 chr2L 17303614 17303621 4 171 3.5 3.5 3.5 0.9 181 chr2L 17303440 intergenic not near genes chr2L 17303530 intergenic not near genes chr2L 17303621 intergenic not near genes chr2L_4_17300001 chr2L_17300001 RAL-837 562 chr2L 17327910 17327919 chr2L 17328008 17328025 5 104 8.5 5.0 6.8 0.6 115 chr2L 17327910 intergenic not near genes chr2L 17327968 intergenic not near genes chr2L 17328025 intergenic not near genes chr2L_5_17325001 chr2L_17325001 RAL-837 563 chr2L 17329060 17329104 chr2L 17329204 17329252 9 147 1.5 1.5 1.5 3.6 192 chr2L 17329060 intergenic not near genes chr2L 17329156 intergenic not near genes chr2L 17329252 intergenic not near genes chr2L_9_17325001 chr2L_17325001 RAL-837 564 chr2L 17335521 17335572 chr2L 17336713 17336737 1360 5 1180 0.0 0.5 0.2 4.2 1216 chr2L 17335521 intergenic not near genes chr2L 17336129 intergenic not near genes chr2L 17336737 intergenic not near genes chr2L_5_17335001 chr2L_17335001 RAL-837 565 chr2L 17351922 17351943 chr2L 17352032 17352065 4 119 2.5 1.0 1.8 1.4 143 chr2L 17351922 intergenic not near genes chr2L 17351994 intergenic not near genes chr2L 17352065 intergenic not near genes chr2L_4_17350001 chr2L_17350001 RAL-837 566 chr2L 17387469 17387496 chr2L 17387571 17387598 5 102 0.0 8.5 4.2 1.0 129 chr2L 17387469 intron CLIP-190 + chr2L 17387534 intron CLIP-190 + chr2L 17387598 intron CLIP-190 + chr2L_5_17385001 chr2L_17385001 RAL-837 567 chr2L 17405354 17405360 chr2L 17405489 17405495 4 135 13.0 17.0 15.0 0.2 141 chr2L 17405354 intron CLIP-190 + chr2L 17405424 intron CLIP-190 + chr2L 17405495 exon CLIP-190 + chr2L_4_17405001 chr2L_17405001 RAL-837 568 chr2L 17406101 17406139 chr2L 17406417 17406455 6 315 24.0 16.5 20.2 0.3 354 chr2L 17406101 exon CLIP-190 + chr2L 17406278 exon CLIP-190 + chr2L 17406455 exon CLIP-190 + chr2L_6_17405001 chr2L_17405001 RAL-837 569 chr2L 17419279 17419303 chr2L 17419375 17419399 4 94 6.5 4.5 5.5 0.6 120 chr2L 17419279 intron Dif - chr2L 17419339 intron Dif - chr2L 17419399 intron Dif - chr2L_4_17415001 chr2L_17415001 RAL-837 570 chr2L 17425750 17425793 chr2L 17425897 17425907 9 142 5.0 5.0 5.0 1.5 157 chr2L 17425750 intron Dif - chr2L 17425828 intron Dif - chr2L 17425907 intron Dif - chr2L_9_17425001 chr2L_17425001 RAL-837 571 chr2L 17723771 17723797 chr2L 17723884 17723910 6 113 2.0 1.5 1.8 2.1 139 chr2L 17723771 intron CadN - chr2L 17723840 intron CadN - chr2L 17723910 intron CadN - chr2L_6_17720001 chr2L_17720001 RAL-837 572 chr2L 17727852 17727878 chr2L 17729339 17729365 hobo 7 1484 3.5 5.0 4.2 1.3 1513 chr2L 17727852 intron CadN - chr2L 17728608 intron CadN - chr2L 17729365 intron CadN - chr2L_7_17725001 chr2L_17725001 RAL-837 573 chr2L 17741940 17741989 chr2L 17742036 17742063 14 94 3.5 4.5 4.0 2.8 123 chr2L 17741940 intron CadN - chr2L 17742002 intron CadN - chr2L 17742063 intron CadN - chr2L_14_17740001 chr2L_17740001 RAL-837 574 chr2L 17748006 17748022 chr2L 17748072 17748119 5 91 4.5 5.5 5.0 0.8 113 chr2L 17748006 intron CadN - chr2L 17748062 intron CadN - chr2L 17748119 intron CadN - chr2L_5_17745001 chr2L_17745001 RAL-837 575 chr2L 17819904 17819919 chr2L 17825127 17825142 copia 7 5223 5.0 5.0 5.0 1.2 5238 chr2L 17819904 intron CadN2 - chr2L 17822523 intron CadN2 - chr2L 17825142 intron CadN2 - chr2L_7_17820001 chr2L_17820001 RAL-837 576 chr2L 17819922 17819955 chr2L 17825125 17825147 copia 7 5212 4.0 4.5 4.2 1.3 5225 chr2L 17819922 intron CadN2 - chr2L 17822534 intron CadN2 - chr2L 17825147 intron CadN2 - chr2L_7_17820001 chr2L_17820001 RAL-837 577 chr2L 17826557 17826583 chr2L 17829195 17829214 5 2634 23.0 16.5 19.8 0.2 2657 chr2L 17826557 intron CadN2 - chr2L 17827886 intron CadN2 - chr2L 17829214 intron CadN2 - chr2L_5_17825001 chr2L_17825001 RAL-837 578 chr2L 17855484 17855521 chr2L 17855582 17855609 12 92 3.5 4.0 3.8 2.5 125 chr2L 17855484 intron CadN2 - chr2L 17855546 intron CadN2 - chr2L 17855609 intron CadN2 - chr2L_12_17855001 chr2L_17855001 RAL-837 579 chr2L 17879994 17880017 chr2L 17880100 17880124 6 107 4.0 5.5 4.8 1.0 130 chr2L 17879994 intergenic not near genes chr2L 17880059 intergenic not near genes chr2L 17880124 intergenic not near genes chr2L_6_17880001 chr2L_17880001 RAL-837 580 chr2L 17880018 17880030 chr2L 17880084 17880136 6 98 3.0 3.0 3.0 1.5 118 chr2L 17880018 intergenic not near genes chr2L 17880077 intergenic not near genes chr2L 17880136 intergenic not near genes chr2L_6_17880001 chr2L_17880001 RAL-837 581 chr2L 17880576 17880619 chr2L 17880708 17880713 7 126 3.5 4.0 3.8 1.5 137 chr2L 17880576 intergenic not near genes chr2L 17880644 intergenic not near genes chr2L 17880713 intergenic not near genes chr2L_7_17880001 chr2L_17880001 RAL-837 582 chr2L 17911939 17911989 chr2L 17914137 17914167 pogo 18 2194 4.0 5.5 4.8 3.1 2228 chr2L 17911939 intergenic not near genes chr2L 17913053 intergenic not near genes chr2L 17914167 intergenic CG43271 - chr2L_18_17910001 chr2L_17910001 RAL-837 583 chr2L 17944397 17944452 chr2L 17944580 17944589 9 171 3.0 1.5 2.2 2.8 192 chr2L 17944397 intergenic not near genes chr2L 17944493 intergenic not near genes chr2L 17944589 intergenic not near genes chr2L_9_17940001 chr2L_17940001 RAL-837 584 chr2L 17951924 17951975 chr2L 17953411 17953462 hobo 20 1484 2.5 3.0 2.8 5.3 1538 chr2L 17951924 intergenic CR44398 -,CR44397 - chr2L 17952693 intergenic not near genes chr2L 17953462 intergenic not near genes chr2L_20_17950001 chr2L_17950001 RAL-837 585 chr2L 18051864 18051889 chr2L 18061030 18061056 roo 12 9166 5.0 3.0 4.0 2.4 9192 chr2L 18051864 intron rdo + chr2L 18056460 intron rdo + chr2L 18061056 intron rdo + chr2L_12_18055001 chr2L_18055001 RAL-837 586 chr2L 18095569 18095589 chr2L 18095670 18095690 7 101 8.0 3.5 5.8 1.0 121 chr2L 18095569 intergenic not near genes chr2L 18095630 intergenic not near genes chr2L 18095690 intergenic not near genes chr2L_7_18095001 chr2L_18095001 RAL-837 587 chr2L 18111221 18111245 chr2L 18111332 18111336 5 107 6.0 4.5 5.2 0.8 115 chr2L 18111221 intergenic not near genes chr2L 18111278 intergenic not near genes chr2L 18111336 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-837 588 chr2L 18254803 18254837 chr2L 18254912 18254957 8 112 4.5 4.0 4.2 1.5 154 chr2L 18254803 intron CG42750 - chr2L 18254880 intron CG42750 - chr2L 18254957 intron CG42750 - chr2L_8_18250001 chr2L_18250001 RAL-837 589 chr2L 18264041 18264085 chr2L 18264138 18264182 10 94 5.0 2.5 3.8 2.1 141 chr2L 18264041 intron CG42750 - chr2L 18264112 intron CG42750 - chr2L 18264182 intron CG42750 - chr2L_10_18260001 chr2L_18260001 RAL-837 590 chr2L 18274022 18274071 chr2L 18274128 18274176 14 106 3.0 2.5 2.8 3.7 154 chr2L 18274022 intron CG42750 - chr2L 18274099 intron CG42750 - chr2L 18274176 intron CG42750 - chr2L_14_18270001 chr2L_18270001 RAL-837 591 chr2L 18306744 18306792 chr2L 18307121 18307168 11 373 3.0 2.5 2.8 2.9 424 chr2L 18306744 intergenic not near genes chr2L 18306956 intergenic not near genes chr2L 18307168 intergenic not near genes chr2L_11_18305001 chr2L_18305001 RAL-837 592 chr2L 18309464 18309515 chr2L 18309630 18309641 9 159 4.5 3.0 3.8 1.9 177 chr2L 18309464 intergenic CG43354 -,CR44694 + chr2L 18309552 intergenic CR44694 +,CG43354 - chr2L 18309641 5` UTR CR44694 + chr2L_9_18305001 chr2L_18305001 RAL-837 593 chr2L 18315260 18315282 chr2L 18315330 18315362 9 89 2.5 2.5 2.5 2.6 102 chr2L 18315260 intergenic not near genes chr2L 18315311 intergenic not near genes chr2L 18315362 intergenic not near genes chr2L_9_18315001 chr2L_18315001 RAL-837 594 chr2L 18408022 18408050 chr2L 18412811 18412822 Doc 6 4794 5.5 0.0 2.8 1.6 4800 chr2L 18408022 intergenic not near genes chr2L 18410422 intergenic not near genes chr2L 18412822 intergenic not near genes chr2L_6_18410001 chr2L_18410001 RAL-837 595 chr2L 18435176 18435215 chr2L 18436044 18436086 6 871 22.5 27.0 24.8 0.2 910 chr2L 18435176 intergenic not near genes chr2L 18435631 intergenic not near genes chr2L 18436086 intergenic not near genes chr2L_6_18435001 chr2L_18435001 RAL-837 596 chr2L 18629355 18629395 chr2L 18629460 18629468 7 93 4.0 4.0 4.0 1.4 113 chr2L 18629355 intron MESR3 + chr2L 18629412 intron MESR3 + chr2L 18629468 intron MESR3 + chr2L_7_18625001 chr2L_18625001 RAL-837 597 chr2L 18807582 18807631 chr2L 18807685 18807734 12 102 3.0 2.0 2.5 3.4 152 chr2L 18807582 intergenic not near genes chr2L 18807658 intergenic not near genes chr2L 18807734 intergenic not near genes chr2L_12_18805001 chr2L_18805001 RAL-837 598 chr2L 18816746 18816766 chr2L 18816869 18816903 6 140 3.0 3.5 3.2 1.4 157 chr2L 18816746 intergenic not near genes chr2L 18816824 intergenic not near genes chr2L 18816903 intergenic not near genes chr2L_6_18815001 chr2L_18815001 RAL-837 599 chr2L 18876844 18876884 chr2L 18876942 18876982 12 95 3.0 4.5 3.8 2.5 138 chr2L 18876844 intron tup - chr2L 18876913 intron tup - chr2L 18876982 intron tup - chr2L_12_18875001 chr2L_18875001 RAL-837 600 chr2L 18898378 18898386 chr2L 18898480 18898482 4 100 7.5 0.5 4.0 0.8 104 chr2L 18898378 intergenic not near genes chr2L 18898430 intergenic not near genes chr2L 18898482 intergenic not near genes chr2L_4_18895001 chr2L_18895001 RAL-837 601 chr2L 18898393 18898422 chr2L 18898477 18898524 11 92 4.5 0.5 2.5 3.1 131 chr2L 18898393 intergenic not near genes chr2L 18898458 intergenic not near genes chr2L 18898524 intergenic not near genes chr2L_11_18895001 chr2L_18895001 RAL-837 602 chr2L 18902608 18902645 chr2L 18902904 18902946 14 298 3.5 4.5 4.0 2.8 338 chr2L 18902608 intergenic not near genes chr2L 18902777 intergenic not near genes chr2L 18902946 intergenic not near genes chr2L_14_18900001 chr2L_18900001 RAL-837 603 chr2L 18945759 18945791 chr2L 18945836 18945868 12 85 4.0 3.5 3.8 2.5 109 chr2L 18945759 5` UTR CR44740 + chr2L 18945814 5` UTR CR44740 + chr2L 18945868 5` UTR CR44740 + chr2L_12_18945001 chr2L_18945001 RAL-837 604 chr2L 18981731 18981775 chr2L 18981828 18981872 7 94 3.0 3.5 3.2 1.7 141 chr2L 18981731 intron Swip-1 - chr2L 18981802 intron Swip-1 - chr2L 18981872 intron Swip-1 - chr2L_7_18980001 chr2L_18980001 RAL-837 605 chr2L 18990301 18990341 chr2L 18990421 18990472 12 122 4.0 4.5 4.2 2.3 171 chr2L 18990301 intergenic CG15170 - chr2L 18990386 intergenic CG15170 - chr2L 18990472 intergenic CG15170 - chr2L_12_18990001 chr2L_18990001 RAL-837 606 chr2L 19016228 19016265 chr2L 19016344 19016381 12 115 6.5 5.5 6.0 1.7 153 chr2L 19016228 intergenic not near genes chr2L 19016304 intergenic not near genes chr2L 19016381 intergenic not near genes chr2L_12_19015001 chr2L_19015001 RAL-837 607 chr2L 19018277 19018312 chr2L 19018367 19018409 4 97 3.5 4.0 3.8 0.8 132 chr2L 19018277 intergenic not near genes chr2L 19018343 intergenic not near genes chr2L 19018409 intergenic not near genes chr2L_4_19015001 chr2L_19015001 RAL-837 608 chr2L 19105355 19105402 chr2L 19105659 19105700 12 300 4.0 4.0 4.0 2.4 345 chr2L 19105355 intron Lim3 - chr2L 19105528 intron Lim3 - chr2L 19105700 intron Lim3 - chr2L_12_19105001 chr2L_19105001 RAL-837 609 chr2L 19147351 19147390 chr2L 19154406 19154444 297 11 7052 6.0 6.5 6.2 1.5 7093 chr2L 19147351 intron brat + chr2L 19150898 intron brat + chr2L 19154444 intron brat + chr2L_11_19150001 chr2L_19150001 RAL-837 610 chr2L 19191512 19191564 chr2L 19191654 19191671 10 127 3.5 4.0 3.8 2.1 159 chr2L 19191512 intron drl + chr2L 19191592 intron drl + chr2L 19191671 intron drl + chr2L_10_19190001 chr2L_19190001 RAL-837 611 chr2L 19197851 19197902 chr2L 19197976 19198027 10 124 3.5 4.0 3.8 2.1 176 chr2L 19197851 intron drl + chr2L 19197939 intron drl + chr2L 19198027 intron drl + chr2L_10_19195001 chr2L_19195001 RAL-837 612 chr2L 19317969 19318016 chr2L 19318067 19318114 14 95 0.5 6.0 3.2 3.3 145 chr2L 19317969 intergenic not near genes chr2L 19318042 intergenic not near genes chr2L 19318114 intergenic not near genes chr2L_14_19315001 chr2L_19315001 RAL-837 613 chr2L 19342946 19342962 chr2L 19343051 19343062 5 104 6.0 2.5 4.2 1.0 116 chr2L 19342946 intron dnt - chr2L 19343004 intron dnt - chr2L 19343062 intron dnt - chr2L_5_19340001 chr2L_19340001 RAL-837 614 chr2L 19342967 19342981 chr2L 19343046 19343085 7 91 5.0 2.0 3.5 1.6 118 chr2L 19342967 intron dnt - chr2L 19343026 intron dnt - chr2L 19343085 intron dnt - chr2L_7_19340001 chr2L_19340001 RAL-837 615 chr2L 19345009 19345041 chr2L 19357238 19357270 blood 6 12227 1.5 6.0 3.8 1.2 12261 chr2L 19345009 intron dnt - chr2L 19351140 intron dnt - chr2L 19357270 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-837 616 chr2L 19357525 19357558 chr2L 19357635 19357668 12 110 5.0 2.0 3.5 2.7 143 chr2L 19357525 intron dnt - chr2L 19357596 intron dnt - chr2L 19357668 intron dnt - chr2L_12_19355001 chr2L_19355001 RAL-837 617 chr2L 19374471 19374512 chr2L 19374600 19374625 11 126 4.0 2.0 3.0 2.8 154 chr2L 19374471 intergenic not near genes chr2L 19374548 intergenic not near genes chr2L 19374625 intergenic not near genes chr2L_11_19370001 chr2L_19370001 RAL-837 618 chr2L 19380489 19380526 chr2L 19380589 19380626 9 95 3.0 5.5 4.2 1.7 137 chr2L 19380489 intergenic CG17350 + chr2L 19380558 intergenic CG17350 + chr2L 19380626 intergenic CG17350 + chr2L_9_19380001 chr2L_19380001 RAL-837 619 chr2L 19383981 19384019 chr2L 19384097 19384097 16 113 4.0 4.5 4.2 3.1 116 chr2L 19383981 exon fon - chr2L 19384039 exon fon - chr2L 19384097 exon fon - chr2L_16_19380001 chr2L_19380001 RAL-837 620 chr2L 19405330 19405629 chr2L 19405480 19405739 19 137 3.5 1.5 2.5 5.4 409 chr2L 19405330 intron Pax - chr2L 19405534 intron Pax - chr2L 19405739 intron Pax - chr2L_19_19405001 chr2L_19405001 RAL-837 621 chr2L 19405631 19405642 chr2L 19405709 19405722 4 92 2.0 1.0 1.5 1.6 91 chr2L 19405631 intron Pax - chr2L 19405676 intron Pax - chr2L 19405722 intron Pax - chr2L_4_19405001 chr2L_19405001 RAL-837 622 chr2L 19518871 19518896 chr2L 19518969 19518999 6 99 2.5 3.0 2.8 1.6 128 chr2L 19518871 5` UTR CG10132 + chr2L 19518935 5` UTR CG10132 + chr2L 19518999 5` UTR CG10132 + chr2L_6_19515001 chr2L_19515001 RAL-837 623 chr2L 19543106 19543159 chr2L 19543210 19543263 18 98 2.5 2.0 2.2 5.6 157 chr2L 19543106 intron ref(2)P + chr2L 19543184 intron ref(2)P + chr2L 19543263 intron ref(2)P + chr2L_18_19540001 chr2L_19540001 RAL-837 624 chr2L 19558505 19558527 chr2L 19558629 19558640 4 121 6.5 11.5 9.0 0.4 135 chr2L 19558505 intron Tep5 + chr2L 19558572 intron Tep5 + chr2L 19558640 intron Tep5 + chr2L_4_19555001 chr2L_19555001 RAL-837 625 chr2L 19559984 19560039 chr2L 19560257 19560284 8 268 2.5 5.5 4.0 1.6 300 chr2L 19559984 exon Tep5 + chr2L 19560134 exon Tep5 + chr2L 19560284 intron Tep5 + chr2L_8_19560001 chr2L_19560001 RAL-837 626 chr2L 19560823 19560861 chr2L 19560918 19560924 15 96 5.0 0.0 2.5 4.3 101 chr2L 19560823 exon Tep5 + chr2L 19560874 intron Tep5 + chr2L 19560924 exon Tep5 + chr2L_15_19560001 chr2L_19560001 RAL-837 627 chr2L 19561338 19561354 chr2L 19561492 19561515 10 160 2.5 3.0 2.8 2.6 177 chr2L 19561338 exon Tep5 + chr2L 19561426 exon Tep5 + chr2L 19561515 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-837 628 chr2L 19601562 19601600 chr2L 19601659 19601687 6 95 5.0 6.0 5.5 0.9 125 chr2L 19601562 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601687 intron,intron Lar +,CR44978 - chr2L_6_19600001 chr2L_19600001 RAL-837 629 chr2L 19602825 19602841 chr2L 19602911 19602937 5 89 2.0 6.0 4.0 1.0 112 chr2L 19602825 intron,intron Lar +,CR44978 - chr2L 19602881 intron,intron Lar +,CR44978 - chr2L 19602937 intron,intron Lar +,CR44978 - chr2L_5_19600001 chr2L_19600001 RAL-837 630 chr2L 19620081 19620127 chr2L 19621080 19621136 jockey 10 1001 3.0 1.5 2.2 3.1 1055 chr2L 19620081 intron Lar + chr2L 19620608 intron Lar + chr2L 19621136 intron Lar + chr2L_10_19620001 chr2L_19620001 RAL-837 631 chr2L 19652559 19652586 chr2L 19674008 19674042 opus 5 21455 6.5 6.0 6.2 0.7 21483 chr2L 19652559 intron Lar + chr2L 19663300 intron Lar + chr2L 19674042 intron Lar + chr2L_5_19660001 chr2L_19660001 RAL-837 632 chr2L 19681916 19681938 chr2L 19682228 19682250 5 309 0.5 5.5 3.0 1.2 334 chr2L 19681916 intron Lar + chr2L 19682083 intron Lar + chr2L 19682250 intron Lar + chr2L_5_19680001 chr2L_19680001 RAL-837 633 chr2L 19703517 19703567 chr2L 19712673 19712723 roo 17 9150 6.5 5.5 6.0 2.4 9206 chr2L 19703517 intron Lar + chr2L 19708120 intron Lar + chr2L 19712723 intron Lar + chr2L_17_19705001 chr2L_19705001 RAL-837 634 chr2L 19737360 19737369 chr2L 19740829 19740838 1360 5 3481 3.5 6.0 4.8 0.9 3478 chr2L 19737360 intergenic Nf-YB + chr2L 19739099 intergenic not near genes chr2L 19740838 intergenic not near genes chr2L_5_19735001 chr2L_19735001 RAL-837 635 chr2L 19737371 19737386 chr2L 19740824 19740858 1360 9 3470 2.5 4.5 3.5 2.0 3487 chr2L 19737371 intergenic Nf-YB + chr2L 19739114 intergenic not near genes chr2L 19740858 intergenic not near genes chr2L_9_19735001 chr2L_19735001 RAL-837 636 chr2L 19762794 19762821 chr2L 19763051 19763074 pogo 8 260 5.5 5.0 5.2 1.3 280 chr2L 19762794 5` UTR fbp - chr2L 19762934 intron fbp - chr2L 19763074 intron fbp - chr2L_8_19760001 chr2L_19760001 RAL-837 637 chr2L 19762822 19762836 chr2L 19763049 19763084 pogo 5 247 3.5 5.0 4.2 1.0 262 chr2L 19762822 intron fbp - chr2L 19762953 intron fbp - chr2L 19763084 intron fbp - chr2L_5_19760001 chr2L_19760001 RAL-837 638 chr2L 19773144 19773191 chr2L 19773251 19773288 15 102 4.0 2.5 3.2 3.6 144 chr2L 19773144 intergenic not near genes chr2L 19773216 intergenic not near genes chr2L 19773288 intergenic not near genes chr2L_15_19770001 chr2L_19770001 RAL-837 639 chr2L 19824404 19824436 chr2L 19824507 19824534 9 101 4.5 7.0 5.8 1.3 130 chr2L 19824404 intron sick + chr2L 19824469 intron sick + chr2L 19824534 intron sick + chr2L_9_19820001 chr2L_19820001 RAL-837 640 chr2L 19837260 19837306 chr2L 19837356 19837396 10 96 3.0 2.0 2.5 2.9 136 chr2L 19837260 intron sick + chr2L 19837328 intron sick + chr2L 19837396 intron sick + chr2L_10_19835001 chr2L_19835001 RAL-837 641 chr2L 19846256 19846277 chr2L 19846342 19846378 9 98 0.0 6.5 3.2 2.1 122 chr2L 19846256 intron sick + chr2L 19846317 intron sick + chr2L 19846378 intron sick + chr2L_9_19845001 chr2L_19845001 RAL-837 642 chr2L 19874207 19874246 chr2L 19874575 19874614 12 367 1.5 5.5 3.5 2.7 407 chr2L 19874207 intron sick + chr2L 19874410 intron sick + chr2L 19874614 intron sick + chr2L_12_19870001 chr2L_19870001 RAL-837 643 chr2L 19942859 19942898 chr2L 19942957 19942996 5 98 4.0 4.5 4.2 1.0 137 chr2L 19942859 intron sick + chr2L 19942928 intron sick + chr2L 19942996 intron sick + chr2L_5_19940001 chr2L_19940001 RAL-837 644 chr2L 19947553 19947572 chr2L 19947682 19947709 5 134 4.5 0.0 2.2 1.6 156 chr2L 19947553 intron sick + chr2L 19947631 intron sick + chr2L 19947709 intron sick + chr2L_5_19945001 chr2L_19945001 RAL-837 645 chr2L 19947575 19947735 chr2L 19947677 19947841 8 109 0.0 0.0 0.0 8.0 266 chr2L 19947575 intron sick + chr2L 19947708 intron sick + chr2L 19947841 intron sick + chr2L_8_19945001 chr2L_19945001 RAL-837 646 chr2L 19972195 19972246 chr2L 19972337 19972388 13 139 2.5 4.0 3.2 3.1 193 chr2L 19972195 intron CG43861 - chr2L 19972292 intron CG43861 - chr2L 19972388 intron CG43861 - chr2L_13_19970001 chr2L_19970001 RAL-837 647 chr2L 19977484 19977525 chr2L 19977639 19977680 11 149 1.5 3.0 2.2 3.4 196 chr2L 19977484 intron CG43861 - chr2L 19977582 intron CG43861 - chr2L 19977680 intron CG43861 - chr2L_11_19975001 chr2L_19975001 RAL-837 648 chr2L 19993812 19993845 chr2L 19994766 19994809 10 958 2.5 4.5 3.5 2.2 997 chr2L 19993812 intron CG43861 - chr2L 19994310 intron CG43861 - chr2L 19994809 intron CG43861 - chr2L_10_19990001 chr2L_19990001 RAL-837 649 chr2L 20005870 20005895 chr2L 20010955 20010966 flea 7 5088 3.0 5.5 4.2 1.3 5096 chr2L 20005870 intron CG43861 - chr2L 20008418 intron CG43861 - chr2L 20010966 intron CG43861 - chr2L_7_20005001 chr2L_20005001 RAL-837 650 chr2L 20013872 20013885 chr2L 20013975 20013988 5 103 7.5 2.5 5.0 0.8 116 chr2L 20013872 intron CG43861 - chr2L 20013930 intron CG43861 - chr2L 20013988 intron CG43861 - chr2L_5_20010001 chr2L_20010001 RAL-837 651 chr2L 20013899 20013920 chr2L 20013972 20013996 4 89 6.0 2.0 4.0 0.8 97 chr2L 20013899 intron CG43861 - chr2L 20013948 intron CG43861 - chr2L 20013996 intron CG43861 - chr2L_4_20010001 chr2L_20010001 RAL-837 652 chr2L 20022070 20022102 chr2L 20022203 20022235 5 132 3.5 4.0 3.8 1.0 165 chr2L 20022070 intergenic not near genes chr2L 20022152 intergenic not near genes chr2L 20022235 intergenic not near genes chr2L_5_20020001 chr2L_20020001 RAL-837 653 chr2L 20079519 20079548 chr2L 20079640 20079689 7 131 4.0 0.5 2.2 2.2 170 chr2L 20079519 intron,intron neb +,fok - chr2L 20079604 intron,intron neb +,fok - chr2L 20079689 intron,intron neb +,fok - chr2L_7_20075001 chr2L_20075001 RAL-837 654 chr2L 20085445 20085495 chr2L 20085557 20085575 11 104 0.5 3.5 2.0 3.7 130 chr2L 20085445 intron neb + chr2L 20085510 intron neb + chr2L 20085575 intron neb + chr2L_11_20085001 chr2L_20085001 RAL-837 655 chr2L 20124316 20124359 chr2L 20124414 20124457 8 97 4.0 5.5 4.8 1.4 141 chr2L 20124316 intergenic not near genes chr2L 20124386 intergenic not near genes chr2L 20124457 intergenic not near genes chr2L_8_20120001 chr2L_20120001 RAL-837 656 chr2L 20271241 20271269 chr2L 20271344 20271372 9 103 8.0 3.5 5.8 1.3 131 chr2L 20271241 intergenic not near genes chr2L 20271306 intergenic not near genes chr2L 20271372 intergenic not near genes chr2L_9_20270001 chr2L_20270001 RAL-837 657 chr2L 20272105 20272124 chr2L 20282836 20282855 copia 8 10731 6.5 5.0 5.8 1.2 10750 chr2L 20272105 intergenic not near genes chr2L 20277480 intergenic not near genes chr2L 20282855 intergenic not near genes chr2L_8_20275001 chr2L_20275001 RAL-837 658 chr2L 20272127 20272143 chr2L 20282834 20282874 copia 7 10728 3.5 5.0 4.2 1.3 10747 chr2L 20272127 intergenic not near genes chr2L 20277500 intergenic not near genes chr2L 20282874 intergenic not near genes chr2L_7_20275001 chr2L_20275001 RAL-837 659 chr2L 20296503 20296533 chr2L 20296596 20296634 8 98 2.0 4.5 3.2 1.9 131 chr2L 20296503 intergenic CR43414 - chr2L 20296568 intergenic CR43414 - chr2L 20296634 intergenic CR43414 - chr2L_8_20295001 chr2L_20295001 RAL-837 660 chr2L 20303152 20303181 chr2L 20310630 20310669 blood 7 7487 6.0 5.5 5.8 1.0 7517 chr2L 20303152 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310669 intergenic not near genes chr2L_7_20305001 chr2L_20305001 RAL-837 661 chr2L 20320042 20320065 chr2L 20320144 20320204 7 133 3.0 0.5 1.8 2.5 162 chr2L 20320042 intron spir + chr2L 20320123 intron spir + chr2L 20320204 intron spir + chr2L_7_20320001 chr2L_20320001 RAL-837 662 chr2L 20366828 20366863 chr2L 20366950 20366985 9 119 6.5 4.5 5.5 1.4 157 chr2L 20366828 intergenic not near genes chr2L 20366906 intergenic not near genes chr2L 20366985 intergenic not near genes chr2L_9_20365001 chr2L_20365001 RAL-837 663 chr2L 20368635 20368661 chr2L 20368708 20368759 6 82 4.0 6.0 5.0 1.0 124 chr2L 20368635 intergenic not near genes chr2L 20368697 intergenic not near genes chr2L 20368759 intergenic not near genes chr2L_6_20365001 chr2L_20365001 RAL-837 664 chr2L 20372215 20372246 chr2L 20372476 20372507 pogo 7 258 0.5 5.0 2.8 1.8 292 chr2L 20372215 intergenic Ugt37a1 - chr2L 20372361 intergenic Ugt37a1 - chr2L 20372507 exon Ugt37a1 - chr2L_7_20370001 chr2L_20370001 RAL-837 665 chr2L 20498679 20498706 chr2L 20498792 20498825 8 115 0.0 7.0 3.5 1.8 146 chr2L 20498679 intergenic not near genes chr2L 20498752 intergenic not near genes chr2L 20498825 intergenic not near genes chr2L_8_20495001 chr2L_20495001 RAL-837 666 chr2L 20513581 20513594 chr2L 20513689 20513706 5 111 4.5 3.5 4.0 1.0 125 chr2L 20513581 intergenic CR45702 + chr2L 20513644 intergenic CR45702 + chr2L 20513706 intergenic CR45702 + chr2L_5_20510001 chr2L_20510001 RAL-837 667 chr2L 20553165 20553214 chr2L 20553261 20553310 9 92 3.0 5.0 4.0 1.8 145 chr2L 20553165 intergenic not near genes chr2L 20553238 intergenic not near genes chr2L 20553310 intergenic not near genes chr2L_9_20550001 chr2L_20550001 RAL-837 668 chr2L 20568645 20568687 chr2L 20569055 20569094 X-element 15 407 3.5 1.5 2.5 4.3 449 chr2L 20568645 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569094 intron CR45347 + chr2L_15_20565001 chr2L_20565001 RAL-837 669 chr2L 20576203 20576237 chr2L 20583692 20583726 blood 6 7487 7.0 5.5 6.2 0.8 7523 chr2L 20576203 intergenic CR45347 + chr2L 20579964 intergenic not near genes chr2L 20583726 3` UTR CR44909 - chr2L_6_20575001 chr2L_20575001 RAL-837 670 chr2L 20639480 20639523 chr2L 20639776 20639795 INE-1 12 290 4.0 2.5 3.2 2.9 315 chr2L 20639480 intergenic not near genes chr2L 20639638 intergenic CG31680 + chr2L 20639795 intergenic CG31680 + chr2L_12_20635001 chr2L_20635001 RAL-837 671 chr2L 20643326 20643339 chr2L 20643478 20643491 4 152 3.0 9.5 6.2 0.6 165 chr2L 20643326 intergenic phr6-4 -,CG17470 - chr2L 20643408 3` UTR phr6-4 - chr2L 20643491 3` UTR phr6-4 - chr2L_4_20640001 chr2L_20640001 RAL-837 672 chr2L 20674812 20674855 chr2L 20674917 20674953 4 102 4.0 0.0 2.0 1.3 141 chr2L 20674812 intron CG31678 - chr2L 20674882 intron CG31678 - chr2L 20674953 intron CG31678 - chr2L_4_20670001 chr2L_20670001 RAL-837 673 chr2L 20848147 20848183 chr2L 20848243 20848279 9 95 5.0 1.5 3.2 2.1 132 chr2L 20848147 intron CG31676 + chr2L 20848213 intron CG31676 + chr2L 20848279 intron CG31676 + chr2L_9_20845001 chr2L_20845001 RAL-837 674 chr2L 20852293 20852438 chr2L 20852382 20852528 6 96 2.5 4.0 3.2 1.4 235 chr2L 20852293 intergenic twit + chr2L 20852410 intergenic twit + chr2L 20852528 intergenic twit + chr2L_6_20850001 chr2L_20850001 RAL-837 675 chr2L 20911010 20911055 chr2L 20911106 20911151 13 83 4.5 5.0 4.8 2.2 141 chr2L 20911010 intron,intron CG43739 -,sky - chr2L 20911080 intron,intron CG43739 -,sky - chr2L 20911151 intron,intron CG43739 -,sky - chr2L_13_20910001 chr2L_20910001 RAL-837 676 chr2L 20952630 20952676 chr2L 20952747 20952793 17 112 3.0 2.0 2.5 4.9 163 chr2L 20952630 intergenic not near genes chr2L 20952712 intergenic not near genes chr2L 20952793 intergenic not near genes chr2L_17_20950001 chr2L_20950001 RAL-837 677 chr2L 20976648 20976674 chr2L 20981463 20981485 X-element 14 4825 8.0 2.5 5.2 2.3 4837 chr2L 20976648 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981485 intron CG42238 - chr2L_14_20975001 chr2L_20975001 RAL-837 678 chr2L 20984725 20984772 chr2L 20984832 20984854 11 100 2.5 4.0 3.2 2.6 129 chr2L 20984725 intron CG42238 - chr2L 20984790 intron CG42238 - chr2L 20984854 intron CG42238 - chr2L_11_20980001 chr2L_20980001 RAL-837 679 chr2L 21020273 21020305 chr2L 21023950 21024001 NOF 7 3687 2.0 4.0 3.0 1.8 3728 chr2L 21020273 intron CG42238 - chr2L 21022137 intron CG42238 - chr2L 21024001 intron CG42238 - chr2L_7_21020001 chr2L_21020001 RAL-837 680 chr2L 21041113 21041157 chr2L 21049394 21049438 Tirant 8 8279 5.5 4.5 5.0 1.3 8325 chr2L 21041113 intron CG42238 - chr2L 21045276 intron CG42238 - chr2L 21049438 intron CG42238 - chr2L_8_21045001 chr2L_21045001 RAL-837 681 chr2L 21074909 21074940 chr2L 21075020 21075045 11 110 6.0 6.5 6.2 1.5 136 chr2L 21074909 intergenic tadr + chr2L 21074977 intergenic tadr + chr2L 21075045 intergenic tadr + chr2L_11_21070001 chr2L_21070001 RAL-837 682 chr2L 21088908 21088951 chr2L 21089001 21089054 10 97 4.5 4.5 4.5 1.8 146 chr2L 21088908 intergenic ppk13 -,CG9259 + chr2L 21088981 intergenic ppk13 -,CG9259 + chr2L 21089054 intergenic ppk13 -,CG9259 + chr2L_10_21085001 chr2L_21085001 RAL-837 683 chr2L 21215637 21215686 chr2L 21215733 21215752 10 89 2.5 2.5 2.5 2.9 115 chr2L 21215637 intron Atg18b - chr2L 21215694 intron Atg18b - chr2L 21215752 intron Atg18b - chr2L_10_21215001 chr2L_21215001 RAL-837 684 chr2L 21246506 21246535 chr2L 21246621 21246650 8 110 2.5 2.5 2.5 2.3 144 chr2L 21246506 intron Hr39 + chr2L 21246578 intron Hr39 + chr2L 21246650 intron Hr39 + chr2L_8_21245001 chr2L_21245001 RAL-837 685 chr2L 21286592 21286618 chr2L 21286682 21286706 11 94 8.5 5.5 7.0 1.4 114 chr2L 21286592 exon Mio - chr2L 21286649 intron Mio - chr2L 21286706 intron Mio - chr2L_11_21285001 chr2L_21285001 RAL-837 686 chr2L 21347535 21347568 chr2L 21355027 21355058 blood 7 7490 7.0 3.5 5.2 1.1 7523 chr2L 21347535 intron Tsp39D + chr2L 21351296 intron Tsp39D + chr2L 21355058 intron Tsp39D + chr2L_7_21350001 chr2L_21350001 RAL-837 687 chr2L 21691811 21691842 chr2L 21698301 21698328 Burdock 4 6486 4.0 3.5 3.8 0.8 6517 chr2L 21691811 intron CG31619 + chr2L 21695070 intron CG31619 + chr2L 21698328 intron CG31619 + chr2L_4_21695001 chr2L_21695001 RAL-837 688 chr2L 21755478 21755524 chr2L 21755622 21755668 11 138 2.5 5.5 4.0 2.2 190 chr2L 21755478 intron step - chr2L 21755573 intron step - chr2L 21755668 intron step - chr2L_11_21755001 chr2L_21755001 RAL-837 689 chr2L 21806212 21806260 chr2L 21806335 21806383 11 123 3.5 3.0 3.2 2.6 171 chr2L 21806212 intergenic not near genes chr2L 21806298 intergenic not near genes chr2L 21806383 intergenic not near genes chr2L_11_21805001 chr2L_21805001 RAL-837 690 chr2L 21809005 21809018 chr2L 21809220 21809243 4 223 6.5 4.0 5.2 0.6 238 chr2L 21809005 intergenic not near genes chr2L 21809124 intergenic not near genes chr2L 21809243 intergenic not near genes chr2L_4_21805001 chr2L_21805001 RAL-837 691 chr2L 21898830 21898871 chr2L 21898978 21899019 8 142 4.0 5.5 4.8 1.4 189 chr2L 21898830 intergenic not near genes chr2L 21898924 intergenic not near genes chr2L 21899019 intergenic not near genes chr2L_8_21895001 chr2L_21895001 RAL-837 692 chr2L 21966974 21967029 chr2L 21967121 21967145 12 136 4.0 6.0 5.0 2.0 171 chr2L 21966974 intergenic not near genes chr2L 21967060 intergenic not near genes chr2L 21967145 intergenic not near genes chr2L_12_21965001 chr2L_21965001 RAL-837 693 chr2L 21981668 21981690 chr2L 21990853 21990875 roo 8 9184 4.0 6.5 5.2 1.3 9207 chr2L 21981668 exon CG2528 - chr2L 21986272 intron CG2528 - chr2L 21990875 exon CG2528 - chr2L_8_21985001 chr2L_21985001 RAL-837 694 chr2L 21996942 21996945 chr2L 21997043 21997046 4 101 7.5 6.0 6.8 0.5 104 chr2L 21996942 intergenic not near genes chr2L 21996994 intergenic not near genes chr2L 21997046 intergenic not near genes chr2L_4_21995001 chr2L_21995001 RAL-837 695 chr2L 21996948 21996972 chr2L 21997037 21997073 7 98 4.0 6.0 5.0 1.2 125 chr2L 21996948 intergenic not near genes chr2L 21997010 intergenic not near genes chr2L 21997073 intergenic not near genes chr2L_7_21995001 chr2L_21995001 RAL-837 696 chr2L 22001644 22001674 chr2L 22001722 22001770 8 91 5.0 3.5 4.2 1.5 126 chr2L 22001644 intergenic not near genes chr2L 22001707 intergenic not near genes chr2L 22001770 intergenic not near genes chr2L_8_22000001 chr2L_22000001 RAL-837 697 chr2L 22025813 22025849 chr2L 22025912 22025943 7 98 3.0 4.5 3.8 1.5 130 chr2L 22025813 intergenic tio + chr2L 22025878 intergenic tio + chr2L 22025943 intergenic tio + chr2L_7_22025001 chr2L_22025001 RAL-837 698 chr2L 22047242 22047251 chr2L 22047387 22047396 6 143 2.5 7.5 5.0 1.0 154 chr2L 22047242 intergenic not near genes chr2L 22047319 intergenic not near genes chr2L 22047396 intergenic not near genes chr2L_6_22045001 chr2L_22045001 RAL-837 699 chr2L 22294337 22294383 chr2L 22294443 22294491 11 102 2.0 2.0 2.0 3.7 154 chr2L 22294337 intergenic not near genes chr2L 22294414 intergenic not near genes chr2L 22294491 intergenic not near genes chr2L_11_22290001 chr2L_22290001 RAL-837 700 chr2L 22581949 22582002 chr2L 22583758 22583811 S-element 17 1808 3.5 7.0 5.2 2.7 1862 chr2L 22581949 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583811 intron CG17494 + chr2L_17_22580001 chr2L_22580001 RAL-837 701 chr2L 22776415 22776451 chr2L 22778209 22778220 S-element 12 1800 2.0 2.0 2.0 4.0 1805 chr2L 22776415 intergenic not near genes chr2L 22777318 intergenic not near genes chr2L 22778220 intergenic not near genes chr2L_12_22775001 chr2L_22775001 RAL-837 702 chr2L 22968544 22968568 chr2L 22968658 22968670 7 110 2.0 4.5 3.2 1.7 126 chr2L 22968544 intergenic not near genes chr2L 22968607 intergenic not near genes chr2L 22968670 intergenic not near genes chr2L_7_22965001 chr2L_22965001 RAL-837 703 chr2L 22983926 22983973 chr2L 22984022 22984041 6 90 5.0 4.5 4.8 1.0 115 chr2L 22983926 intron cta + chr2L 22983984 intron cta + chr2L 22984041 intron cta + chr2L_6_22980001 chr2L_22980001 RAL-837 704 chr2L 23006484 23006535 chr2L 23007180 23007231 Osvaldo 8 694 1.5 3.0 2.2 2.5 747 chr2L 23006484 intron Cht3 - chr2L 23006858 intron Cht3 - chr2L 23007231 intron Cht3 - chr2L_8_23005001 chr2L_23005001 RAL-837 705 chr2R 469966 469981 chr2R 473212 473242 F-element 4 3255 2.5 9.0 5.8 0.6 3276 chr2R 469966 intergenic not near genes chr2R 471604 intergenic not near genes chr2R 473242 intergenic not near genes chr2R_4_470001 chr2R_470001 RAL-837 706 chr2R 552734 552788 chr2R 553972 553983 1360 11 1218 1.0 1.0 1.0 5.5 1249 chr2R 552734 intron CG40378 + chr2R 553358 intron CG40378 + chr2R 553983 intron CG40378 + chr2R_11_550001 chr2R_550001 RAL-837 707 chr2R 1082369 1082384 chr2R 1087147 1087155 Doc 5 4783 4.0 7.0 5.5 0.8 4786 chr2R 1082369 intron rl + chr2R 1084762 intron rl + chr2R 1087155 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-837 708 chr2R 1340069 1340085 chr2R 1340158 1340169 6 91 15.5 15.5 15.5 0.4 100 chr2R 1340069 intergenic not near genes chr2R 1340119 intergenic not near genes chr2R 1340169 intergenic not near genes chr2R_6_1340001 chr2R_1340001 RAL-837 709 chr2R 1340582 1340587 chr2R 1340866 1340871 4 284 16.5 23.0 19.8 0.2 289 chr2R 1340582 intergenic not near genes chr2R 1340726 intergenic not near genes chr2R 1340871 intergenic not near genes chr2R_4_1340001 chr2R_1340001 RAL-837 710 chr2R 1348488 1348493 chr2R 1348546 1348590 6 84 3.5 3.5 3.5 1.3 102 chr2R 1348488 3` UTR CR44042 - chr2R 1348539 3` UTR CR44042 - chr2R 1348590 3` UTR CR44042 - chr2R_6_1345001 chr2R_1345001 RAL-837 711 chr2R 1516585 1516603 chr2R 1521333 1521351 1731 8 4747 18.5 12.5 15.5 0.5 4766 chr2R 1516585 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521351 5` UTR Maf1 - chr2R_8_1515001 chr2R_1515001 RAL-837 712 chr2R 1733374 1733400 chr2R 1733483 1733522 9 115 1.0 3.0 2.0 3.0 148 chr2R 1733374 intron CG41520 + chr2R 1733448 intron CG41520 + chr2R 1733522 intron CG41520 + chr2R_9_1730001 chr2R_1730001 RAL-837 713 chr2R 1875152 1875161 chr2R 1875528 1875537 Cr1a 4 376 6.5 4.0 5.2 0.6 385 chr2R 1875152 intron CG17684 - chr2R 1875344 intron CG17684 - chr2R 1875537 intron CG17684 - chr2R_4_1875001 chr2R_1875001 RAL-837 714 chr2R 2015148 2015165 chr2R 2015207 2015262 5 81 3.5 3.5 3.5 1.1 114 chr2R 2015148 intron CG17684 - chr2R 2015205 intron CG17684 - chr2R 2015262 intron CG17684 - chr2R_5_2015001 chr2R_2015001 RAL-837 715 chr2R 2093078 2093121 chr2R 2093179 2093210 5 93 3.5 2.5 3.0 1.2 132 chr2R 2093078 intron CG17684 - chr2R 2093144 intron CG17684 - chr2R 2093210 intron CG17684 - chr2R_5_2090001 chr2R_2090001 RAL-837 716 chr2R 2498972 2499009 chr2R 2508131 2508165 roo 12 9163 3.5 4.0 3.8 2.5 9193 chr2R 2498972 intron MFS17 - chr2R 2503568 intron MFS17 - chr2R 2508165 intron MFS17 - chr2R_12_2500001 chr2R_2500001 RAL-837 717 chr2R 2508287 2508333 chr2R 2508445 2508491 13 156 2.5 1.0 1.8 4.6 204 chr2R 2508287 intron MFS17 - chr2R 2508389 intron MFS17 - chr2R 2508491 intron MFS17 - chr2R_13_2505001 chr2R_2505001 RAL-837 718 chr2R 2942283 2942323 chr2R 2942390 2942414 13 112 3.0 3.5 3.2 3.1 131 chr2R 2942283 intron Scp1 - chr2R 2942348 intron Scp1 - chr2R 2942414 intron Scp1 - chr2R_13_2940001 chr2R_2940001 RAL-837 719 chr2R 3291934 3292103 chr2R 3915123 3915284 7 623182 6.5 23.5 15.0 0.4 623350 chr2R 3291934 intergenic not near genes chr2R 3603609 intergenic not near genes chr2R 3915284 intron uex - chr2R_7_3600001 chr2R_3600001 RAL-837 720 chr2R 3399229 3399251 chr2R 3399319 3399357 9 98 1.5 3.5 2.5 2.6 128 chr2R 3399229 intergenic not near genes chr2R 3399293 intergenic not near genes chr2R 3399357 intergenic not near genes chr2R_9_3395001 chr2R_3395001 RAL-837 721 chr2R 4161453 4161472 chr2R 4161549 4161558 4 94 6.5 4.0 5.2 0.6 105 chr2R 4161453 intergenic not near genes chr2R 4161506 intergenic not near genes chr2R 4161558 intergenic not near genes chr2R_4_4160001 chr2R_4160001 RAL-837 722 chr2R 4161476 4161503 chr2R 4161544 4161563 9 84 6.5 3.5 5.0 1.5 87 chr2R 4161476 intergenic not near genes chr2R 4161520 intergenic not near genes chr2R 4161563 intergenic not near genes chr2R_9_4160001 chr2R_4160001 RAL-837 723 chr2R 4312933 4312987 chr2R 4313036 4313091 14 99 3.0 3.5 3.2 3.3 158 chr2R 4312933 intergenic not near genes chr2R 4313012 intergenic not near genes chr2R 4313091 intergenic not near genes chr2R_14_4310001 chr2R_4310001 RAL-837 724 chr2R 4387298 4387313 chr2R 4387453 4387483 4 167 4.5 0.0 2.2 1.2 185 chr2R 4387298 intron Gprk1 - chr2R 4387390 intron Gprk1 - chr2R 4387483 intron Gprk1 - chr2R_4_4385001 chr2R_4385001 RAL-837 725 chr2R 4604533 4604574 chr2R 4604632 4604673 8 91 4.5 7.0 5.8 1.2 140 chr2R 4604533 intron p120ctn + chr2R 4604603 intron p120ctn + chr2R 4604673 intron p120ctn + chr2R_8_4600001 chr2R_4600001 RAL-837 726 chr2R 4617935 4617950 chr2R 4618195 4618220 4 278 3.0 5.5 4.2 0.8 285 chr2R 4617935 intergenic not near genes chr2R 4618078 intergenic not near genes chr2R 4618220 intergenic not near genes chr2R_4_4615001 chr2R_4615001 RAL-837 727 chr2R 4622931 4622987 chr2R 4624110 4624110 1360 10 1163 4.0 5.5 4.8 1.7 1179 chr2R 4622931 intergenic CR44101 - chr2R 4623520 intergenic not near genes chr2R 4624110 intergenic not near genes chr2R_10_4620001 chr2R_4620001 RAL-837 728 chr2R 4624638 4624646 chr2R 4626563 4626571 Bica 5 1925 8.5 5.0 6.8 0.6 1933 chr2R 4624638 intergenic not near genes chr2R 4625604 intergenic not near genes chr2R 4626571 intergenic not near genes chr2R_5_4625001 chr2R_4625001 RAL-837 729 chr2R 4624648 4624671 chr2R 4626548 4626596 Bica 14 1917 5.0 3.5 4.2 2.7 1948 chr2R 4624648 intergenic not near genes chr2R 4625622 intergenic not near genes chr2R 4626596 intergenic not near genes chr2R_14_4625001 chr2R_4625001 RAL-837 730 chr2R 4634162 4634178 chr2R 4634235 4634252 11 81 3.5 3.5 3.5 2.4 90 chr2R 4634162 intergenic not near genes chr2R 4634207 intergenic not near genes chr2R 4634252 intergenic not near genes chr2R_11_4630001 chr2R_4630001 RAL-837 731 chr2R 5075214 5075224 chr2R 5075362 5075364 4 146 12.5 0.0 6.2 0.6 150 chr2R 5075214 intergenic not near genes chr2R 5075289 intergenic not near genes chr2R 5075364 intergenic not near genes chr2R_4_5075001 chr2R_5075001 RAL-837 732 chr2R 5075246 5075374 chr2R 5075757 5075810 13 433 0.0 5.0 2.5 3.7 564 chr2R 5075246 intergenic not near genes chr2R 5075528 intergenic not near genes chr2R 5075810 intergenic not near genes chr2R_13_5075001 chr2R_5075001 RAL-837 733 chr2R 5080802 5080814 chr2R 5080884 5080919 9 101 1.5 3.5 2.5 2.6 117 chr2R 5080802 intergenic not near genes chr2R 5080860 intergenic not near genes chr2R 5080919 intergenic not near genes chr2R_9_5080001 chr2R_5080001 RAL-837 734 chr2R 5125227 5125271 chr2R 5125565 5125609 7 338 3.0 3.5 3.2 1.7 382 chr2R 5125227 intron gus - chr2R 5125418 intron gus - chr2R 5125609 intron gus - chr2R_7_5125001 chr2R_5125001 RAL-837 735 chr2R 5179941 5179980 chr2R 5180094 5180133 9 149 5.5 2.5 4.0 1.8 192 chr2R 5179941 intron Nipped-A - chr2R 5180037 intron Nipped-A - chr2R 5180133 intron Nipped-A - chr2R_9_5180001 chr2R_5180001 RAL-837 736 chr2R 5209761 5209812 chr2R 5210314 5210365 10 544 6.5 6.5 6.5 1.3 604 chr2R 5209761 intron Nipped-A - chr2R 5210063 intron Nipped-A - chr2R 5210365 intron Nipped-A - chr2R_10_5210001 chr2R_5210001 RAL-837 737 chr2R 5417976 5417986 chr2R 5420628 5420630 Burdock 4 2648 13.0 5.0 9.0 0.4 2654 chr2R 5417976 intron laccase2 + chr2R 5419303 intron laccase2 + chr2R 5420630 intron laccase2 + chr2R_4_5415001 chr2R_5415001 RAL-837 738 chr2R 5417987 5418026 chr2R 5420625 5420674 Burdock 15 2640 6.0 5.0 5.5 2.3 2687 chr2R 5417987 intron laccase2 + chr2R 5419330 intron laccase2 + chr2R 5420674 intron laccase2 + chr2R_15_5415001 chr2R_5415001 RAL-837 739 chr2R 5472431 5472446 chr2R 5472873 5472888 7 442 5.5 6.0 5.8 1.0 457 chr2R 5472431 intron CG30440 - chr2R 5472660 intron CG30440 - chr2R 5472888 intron CG30440 - chr2R_7_5470001 chr2R_5470001 RAL-837 740 chr2R 5473348 5473399 chr2R 5473463 5473514 8 109 3.0 5.5 4.2 1.5 166 chr2R 5473348 intron CG30440 - chr2R 5473431 intron CG30440 - chr2R 5473514 intron CG30440 - chr2R_8_5470001 chr2R_5470001 RAL-837 741 chr2R 5475442 5475477 chr2R 5475717 5475760 12 276 2.0 3.0 2.5 3.4 318 chr2R 5475442 intron CG30440 - chr2R 5475601 intron CG30440 - chr2R 5475760 intron CG30440 - chr2R_12_5475001 chr2R_5475001 RAL-837 742 chr2R 5476340 5476382 chr2R 5476899 5476946 7 563 1.0 3.5 2.2 2.2 606 chr2R 5476340 intron CG30440 - chr2R 5476643 intron CG30440 - chr2R 5476946 intron CG30440 - chr2R_7_5475001 chr2R_5475001 RAL-837 743 chr2R 5491662 5491696 chr2R 5491760 5491786 12 102 2.5 4.5 3.5 2.7 124 chr2R 5491662 intron CG30440 - chr2R 5491724 intron CG30440 - chr2R 5491786 intron CG30440 - chr2R_12_5490001 chr2R_5490001 RAL-837 744 chr2R 5653338 5653384 chr2R 5653457 5653503 15 117 5.5 2.0 3.8 3.1 165 chr2R 5653338 intergenic CG1344 + chr2R 5653420 intergenic CG1344 + chr2R 5653503 intergenic CG1344 + chr2R_15_5650001 chr2R_5650001 RAL-837 745 chr2R 5664261 5664313 chr2R 5664361 5664388 13 95 3.0 3.0 3.0 3.2 127 chr2R 5664261 5` UTR CR45472 + chr2R 5664324 intron CR45472 + chr2R 5664388 intron CR45472 + chr2R_13_5660001 chr2R_5660001 RAL-837 746 chr2R 5674586 5674605 chr2R 5674689 5674708 5 103 6.0 2.0 4.0 1.0 122 chr2R 5674586 intergenic not near genes chr2R 5674647 intergenic not near genes chr2R 5674708 intergenic not near genes chr2R_5_5670001 chr2R_5670001 RAL-837 747 chr2R 5712276 5712310 chr2R 5712380 5712414 9 104 2.5 4.0 3.2 2.1 138 chr2R 5712276 intron ap - chr2R 5712345 intron ap - chr2R 5712414 intron ap - chr2R_9_5710001 chr2R_5710001 RAL-837 748 chr2R 5750437 5750454 chr2R 5750549 5750566 10 111 11.5 7.0 9.2 1.0 129 chr2R 5750437 intergenic not near genes chr2R 5750502 intergenic not near genes chr2R 5750566 intergenic not near genes chr2R_10_5750001 chr2R_5750001 RAL-837 749 chr2R 5772549 5772818 chr2R 5772622 5772920 6 94 7.0 3.5 5.2 1.0 371 chr2R 5772549 3` UTR Gp210 + chr2R 5772734 3` UTR Gp210 + chr2R 5772920 3` UTR Gp210 + chr2R_6_5770001 chr2R_5770001 RAL-837 750 chr2R 5772820 5772856 chr2R 5772922 5772948 9 92 3.5 1.5 2.5 2.6 128 chr2R 5772820 3` UTR Gp210 + chr2R 5772884 3` UTR Gp210 + chr2R 5772948 3` UTR Gp210 + chr2R_9_5770001 chr2R_5770001 RAL-837 751 chr2R 5790446 5790492 chr2R 5790551 5790597 11 101 5.5 2.0 3.8 2.3 151 chr2R 5790446 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790597 intergenic not near genes chr2R_11_5790001 chr2R_5790001 RAL-837 752 chr2R 5861267 5861320 chr2R 5861408 5861432 10 130 4.0 5.5 4.8 1.7 165 chr2R 5861267 intergenic dpr12 + chr2R 5861350 intergenic not near genes chr2R 5861432 intergenic not near genes chr2R_10_5860001 chr2R_5860001 RAL-837 753 chr2R 5869275 5869299 chr2R 5874365 5874395 flea 10 5093 6.0 6.5 6.2 1.4 5120 chr2R 5869275 intergenic not near genes chr2R 5871835 intergenic not near genes chr2R 5874395 intergenic not near genes chr2R_10_5870001 chr2R_5870001 RAL-837 754 chr2R 5878912 5878957 chr2R 5879006 5879054 15 94 5.0 4.5 4.8 2.6 142 chr2R 5878912 intergenic CG44438 - chr2R 5878983 intergenic CG44438 - chr2R 5879054 intergenic CG44438 - chr2R_15_5875001 chr2R_5875001 RAL-837 755 chr2R 5885359 5885375 chr2R 5885508 5885524 5 149 3.0 4.0 3.5 1.1 165 chr2R 5885359 5` UTR CR44125 + chr2R 5885442 5` UTR CR44125 + chr2R 5885524 5` UTR CR44125 + chr2R_5_5885001 chr2R_5885001 RAL-837 756 chr2R 5902143 5902190 chr2R 5909722 5909769 17.6 5 7566 3.5 3.5 3.5 1.1 7626 chr2R 5902143 intron CG43366 + chr2R 5905956 intron CG43366 + chr2R 5909769 intron CG43366 + chr2R_5_5905001 chr2R_5905001 RAL-837 757 chr2R 5954493 5954541 chr2R 5954659 5954708 14 164 5.0 4.5 4.8 2.4 215 chr2R 5954493 intergenic not near genes chr2R 5954600 intergenic not near genes chr2R 5954708 intergenic not near genes chr2R_14_5950001 chr2R_5950001 RAL-837 758 chr2R 6033442 6033470 chr2R 6033530 6033559 8 98 0.5 8.0 4.2 1.5 117 chr2R 6033442 intron SCAP - chr2R 6033500 intron SCAP - chr2R 6033559 intron SCAP - chr2R_8_6030001 chr2R_6030001 RAL-837 759 chr2R 6096718 6096744 chr2R 6101936 6101962 BS 6 5216 8.0 5.5 6.8 0.8 5244 chr2R 6096718 intron EcR - chr2R 6099340 intron EcR - chr2R 6101962 intron EcR - chr2R_6_6095001 chr2R_6095001 RAL-837 760 chr2R 6178111 6178144 chr2R 6178257 6178273 7 139 4.5 5.5 5.0 1.2 162 chr2R 6178111 intergenic not near genes chr2R 6178192 intergenic not near genes chr2R 6178273 intergenic not near genes chr2R_7_6175001 chr2R_6175001 RAL-837 761 chr2R 6194673 6194697 chr2R 6194769 6194790 8 100 9.0 8.0 8.5 0.8 117 chr2R 6194673 intron Ptr - chr2R 6194732 intron Ptr - chr2R 6194790 intron Ptr - chr2R_8_6190001 chr2R_6190001 RAL-837 762 chr2R 6220424 6220470 chr2R 6221772 6221808 18 1343 2.0 5.5 3.8 3.8 1384 chr2R 6220424 intron bin3 + chr2R 6221116 intron bin3 + chr2R 6221808 intron bin3 + chr2R_18_6220001 chr2R_6220001 RAL-837 763 chr2R 6236205 6236230 chr2R 6236300 6236316 12 100 5.5 0.5 3.0 3.0 111 chr2R 6236205 intron bin3 + chr2R 6236260 intron bin3 + chr2R 6236316 intron bin3 + chr2R_12_6235001 chr2R_6235001 RAL-837 764 chr2R 6247791 6247834 chr2R 6247889 6247922 14 92 2.0 4.0 3.0 3.5 131 chr2R 6247791 intron Pld + chr2R 6247856 intron Pld + chr2R 6247922 intron Pld + chr2R_14_6245001 chr2R_6245001 RAL-837 765 chr2R 6494508 6494546 chr2R 6499290 6499328 F-element 5 4781 3.0 1.0 2.0 1.7 4820 chr2R 6494508 intergenic not near genes chr2R 6496918 intergenic not near genes chr2R 6499328 intergenic not near genes chr2R_5_6495001 chr2R_6495001 RAL-837 766 chr2R 6500940 6500993 chr2R 6501055 6501063 9 102 5.5 4.0 4.8 1.6 123 chr2R 6500940 intergenic not near genes chr2R 6501002 intergenic not near genes chr2R 6501063 intergenic not near genes chr2R_9_6500001 chr2R_6500001 RAL-837 767 chr2R 6547927 6547958 chr2R 6548110 6548137 5 179 3.5 2.5 3.0 1.2 210 chr2R 6547927 intron jing + chr2R 6548032 intron jing + chr2R 6548137 intron jing + chr2R_5_6545001 chr2R_6545001 RAL-837 768 chr2R 6579761 6579806 chr2R 6584859 6584902 flea 19 5104 2.5 4.0 3.2 4.5 5141 chr2R 6579761 intron jing + chr2R 6582332 intron jing + chr2R 6584902 intron jing + chr2R_19_6580001 chr2R_6580001 RAL-837 769 chr2R 6607908 6607951 chr2R 6608030 6608057 8 115 3.5 3.0 3.2 1.9 149 chr2R 6607908 intron jing + chr2R 6607982 intron jing + chr2R 6608057 intron jing + chr2R_8_6605001 chr2R_6605001 RAL-837 770 chr2R 6691115 6691155 chr2R 6691203 6691229 12 91 4.5 6.0 5.2 1.9 114 chr2R 6691115 intron CG9422 + chr2R 6691172 intron CG9422 + chr2R 6691229 intron CG9422 + chr2R_12_6690001 chr2R_6690001 RAL-837 771 chr2R 6696592 6696622 chr2R 6696695 6696699 11 97 5.5 4.5 5.0 1.8 107 chr2R 6696592 5` UTR Mob4 - chr2R 6696646 5` UTR Mob4 - chr2R 6696699 intergenic Mob4 -,Rab2 + chr2R_11_6695001 chr2R_6695001 RAL-837 772 chr2R 6699578 6699592 chr2R 6699683 6699697 4 105 3.5 5.0 4.2 0.8 119 chr2R 6699578 intergenic Rab2 + chr2R 6699638 intergenic Rab2 + chr2R 6699697 intergenic Rab2 + chr2R_4_6695001 chr2R_6695001 RAL-837 773 chr2R 6699595 6699615 chr2R 6699679 6699720 9 97 2.0 4.0 3.0 2.2 125 chr2R 6699595 intergenic Rab2 + chr2R 6699658 intergenic Rab2 + chr2R 6699720 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_9_6695001 chr2R_6695001 RAL-837 774 chr2R 6846300 6846325 chr2R 6846391 6846422 12 95 3.0 5.5 4.2 2.3 122 chr2R 6846300 intergenic not near genes chr2R 6846361 intergenic not near genes chr2R 6846422 intergenic not near genes chr2R_12_6845001 chr2R_6845001 RAL-837 775 chr2R 6876205 6876250 chr2R 6876307 6876351 16 99 3.0 6.5 4.8 2.8 146 chr2R 6876205 intron,intron CR44169 +,Spn42Da - chr2R 6876278 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876351 5` UTR,intron CR44169 +,Spn42Da - chr2R_16_6875001 chr2R_6875001 RAL-837 776 chr2R 6952150 6952185 chr2R 6959750 6959785 opus 15 7597 2.0 2.5 2.2 4.7 7635 chr2R 6952150 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959785 intron,intron mim -,CheB42c - chr2R_15_6955001 chr2R_6955001 RAL-837 777 chr2R 6964138 6964317 chr2R 6964241 6964393 15 96 2.5 3.0 2.8 3.9 255 chr2R 6964138 intron,intron mim -,CheB42c - chr2R 6964266 intron,intron mim -,CheB42c - chr2R 6964393 intron,intron mim -,CheB42c - chr2R_15_6960001 chr2R_6960001 RAL-837 778 chr2R 7180994 7181004 chr2R 7181090 7181100 5 96 8.5 5.5 7.0 0.6 106 chr2R 7180994 intron pk + chr2R 7181047 intron pk + chr2R 7181100 intron pk + chr2R_5_7180001 chr2R_7180001 RAL-837 779 chr2R 7181008 7181021 chr2R 7181082 7181117 6 91 3.5 5.0 4.2 1.2 109 chr2R 7181008 intron pk + chr2R 7181062 intron pk + chr2R 7181117 intron pk + chr2R_6_7180001 chr2R_7180001 RAL-837 780 chr2R 7196545 7196591 chr2R 7201340 7201386 F-element 14 4795 5.5 0.0 2.8 3.7 4841 chr2R 7196545 intron pk + chr2R 7198966 intron pk + chr2R 7201386 intron pk + chr2R_14_7195001 chr2R_7195001 RAL-837 781 chr2R 7235803 7235842 chr2R 7240915 7240954 jockey 11 5104 6.5 2.5 4.5 2.0 5151 chr2R 7235803 intergenic not near genes chr2R 7238378 intergenic not near genes chr2R 7240954 intergenic not near genes chr2R_11_7235001 chr2R_7235001 RAL-837 782 chr2R 7250706 7250755 chr2R 7250825 7250861 8 102 2.5 2.0 2.2 2.5 155 chr2R 7250706 intergenic Gadd45 + chr2R 7250784 intergenic Gadd45 + chr2R 7250861 intergenic Gadd45 + chr2R_8_7250001 chr2R_7250001 RAL-837 783 chr2R 7262187 7262209 chr2R 7269268 7269288 297 6 7080 5.0 7.0 6.0 0.9 7101 chr2R 7262187 intergenic not near genes chr2R 7265738 intergenic not near genes chr2R 7269288 intergenic not near genes chr2R_6_7265001 chr2R_7265001 RAL-837 784 chr2R 7272279 7272285 chr2R 7272364 7272387 6 97 0.0 1.0 0.5 4.0 108 chr2R 7272279 3` UTR Br140 - chr2R 7272333 3` UTR Br140 - chr2R 7272387 3` UTR Br140 - chr2R_6_7270001 chr2R_7270001 RAL-837 785 chr2R 7290184 7290219 chr2R 7290295 7290341 7 119 5.0 7.0 6.0 1.0 157 chr2R 7290184 intron pwn + chr2R 7290262 intron pwn + chr2R 7290341 intron pwn + chr2R_7_7290001 chr2R_7290001 RAL-837 786 chr2R 7359848 7359861 chr2R 7360110 7360126 5 265 9.0 6.0 7.5 0.6 278 chr2R 7359848 intron Dscam1 - chr2R 7359987 intron Dscam1 - chr2R 7360126 intron Dscam1 - chr2R_5_7355001 chr2R_7355001 RAL-837 787 chr2R 7367851 7367902 chr2R 7367961 7368012 12 103 2.0 4.5 3.2 2.9 161 chr2R 7367851 intron Dscam1 - chr2R 7367932 intron Dscam1 - chr2R 7368012 intron Dscam1 - chr2R_12_7365001 chr2R_7365001 RAL-837 788 chr2R 7417885 7418168 chr2R 7417991 7418258 14 99 2.5 6.0 4.2 2.7 373 chr2R 7417885 intergenic not near genes chr2R 7418072 intergenic not near genes chr2R 7418258 intergenic not near genes chr2R_14_7415001 chr2R_7415001 RAL-837 789 chr2R 7551668 7551719 chr2R 7551776 7551802 17 105 4.5 4.5 4.5 3.1 134 chr2R 7551668 intron Corin + chr2R 7551735 intron Corin + chr2R 7551802 intron Corin + chr2R_17_7550001 chr2R_7550001 RAL-837 790 chr2R 7608396 7608409 chr2R 7613614 7613632 I-element 6 5222 9.0 0.0 4.5 1.1 5236 chr2R 7608396 intron CG1358 - chr2R 7611014 intron CG1358 - chr2R 7613632 intron CG1358 - chr2R_6_7610001 chr2R_7610001 RAL-837 791 chr2R 7691992 7692038 chr2R 7692093 7692139 14 99 1.5 2.0 1.8 5.0 147 chr2R 7691992 intron CG1399 - chr2R 7692066 intron CG1399 - chr2R 7692139 intron CG1399 - chr2R_14_7690001 chr2R_7690001 RAL-837 792 chr2R 7737894 7738191 chr2R 7737993 7738287 10 95 6.0 5.0 5.5 1.5 393 chr2R 7737894 intergenic not near genes chr2R 7738090 intergenic not near genes chr2R 7738287 intergenic not near genes chr2R_10_7735001 chr2R_7735001 RAL-837 793 chr2R 7750794 7750809 chr2R 7750878 7750910 6 95 4.0 4.5 4.2 1.2 116 chr2R 7750794 intron,intron CG30497 -,CG45093 - chr2R 7750852 intron,intron CG30497 -,CG45093 - chr2R 7750910 intron,intron CG30497 -,CG45093 - chr2R_6_7750001 chr2R_7750001 RAL-837 794 chr2R 7769725 7769770 chr2R 7769822 7769841 10 94 3.0 4.0 3.5 2.2 116 chr2R 7769725 intron,intron CG30497 -,CG45093 - chr2R 7769783 intron,intron CG30497 -,CG45093 - chr2R 7769841 intron,intron CG30497 -,CG45093 - chr2R_10_7765001 chr2R_7765001 RAL-837 795 chr2R 7815659 7815701 chr2R 7822148 7822168 Burdock 10 6484 4.5 7.0 5.8 1.5 6509 chr2R 7815659 intergenic CG1882 + chr2R 7818914 intergenic not near genes chr2R 7822168 3` UTR cathD - chr2R_10_7815001 chr2R_7815001 RAL-837 796 chr2R 7869186 7869208 chr2R 7873974 7874014 Doc 9 4800 3.0 2.5 2.8 2.4 4828 chr2R 7869186 intron Dgk - chr2R 7871600 intron Dgk - chr2R 7874014 intron Dgk - chr2R_9_7870001 chr2R_7870001 RAL-837 797 chr2R 7913725 7913773 chr2R 7913827 7913875 10 96 5.5 3.5 4.5 1.8 150 chr2R 7913725 intron CG30377 + chr2R 7913800 intron CG30377 + chr2R 7913875 intron CG30377 + chr2R_10_7910001 chr2R_7910001 RAL-837 798 chr2R 7916427 7916456 chr2R 7916511 7916535 12 87 5.5 4.5 5.0 2.0 108 chr2R 7916427 5` UTR CG12159 - chr2R 7916481 intergenic CG12159 -,Cul1 + chr2R 7916535 intergenic CG12159 -,Cul1 + chr2R_12_7915001 chr2R_7915001 RAL-837 799 chr2R 7999578 7999589 chr2R 7999681 7999692 5 103 1.0 2.0 1.5 2.0 114 chr2R 7999578 intergenic not near genes chr2R 7999635 intergenic not near genes chr2R 7999692 intergenic not near genes chr2R_5_7995001 chr2R_7995001 RAL-837 800 chr2R 8006838 8006872 chr2R 8007006 8007051 8 173 3.0 3.0 3.0 2.0 213 chr2R 8006838 intergenic Odc1 +,Odc2 + chr2R 8006944 intergenic Odc1 +,Odc2 + chr2R 8007051 intergenic Odc2 +,Odc1 + chr2R_8_8005001 chr2R_8005001 RAL-837 801 chr2R 8015646 8015667 chr2R 8017689 8017695 4 2039 8.5 7.0 7.8 0.5 2049 chr2R 8015646 intergenic mir-4981 + chr2R 8016670 intergenic not near genes chr2R 8017695 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-837 802 chr2R 8026790 8026833 chr2R 8026886 8026927 11 89 4.0 1.5 2.8 2.9 137 chr2R 8026790 intergenic CR45267 + chr2R 8026858 intergenic CR45267 + chr2R 8026927 intergenic CR45267 + chr2R_11_8025001 chr2R_8025001 RAL-837 803 chr2R 8067047 8067054 chr2R 8067151 8067158 4 104 8.5 8.0 8.2 0.4 111 chr2R 8067047 intron CG17977 - chr2R 8067102 intron CG17977 - chr2R 8067158 exon CG17977 - chr2R_4_8065001 chr2R_8065001 RAL-837 804 chr2R 8067055 8067090 chr2R 8067147 8067194 12 99 3.5 7.0 5.2 1.9 139 chr2R 8067055 intron CG17977 - chr2R 8067124 intron CG17977 - chr2R 8067194 exon CG17977 - chr2R_12_8065001 chr2R_8065001 RAL-837 805 chr2R 8076663 8076709 chr2R 8076763 8076809 10 100 4.5 6.0 5.2 1.6 146 chr2R 8076663 intron lig + chr2R 8076736 intron lig + chr2R 8076809 intron lig + chr2R_10_8075001 chr2R_8075001 RAL-837 806 chr2R 8089238 8089287 chr2R 8089343 8089393 14 104 3.0 1.5 2.2 4.4 155 chr2R 8089238 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089393 intergenic sut3 +,sut2 + chr2R_14_8085001 chr2R_8085001 RAL-837 807 chr2R 8160934 8160946 chr2R 8161024 8161026 1360 5 100 2.0 3.0 2.5 1.4 92 chr2R 8160934 intron CG8708 - chr2R 8160980 intron CG8708 - chr2R 8161026 intron CG8708 - chr2R_5_8160001 chr2R_8160001 RAL-837 808 chr2R 8185643 8185666 chr2R 8185725 8185757 6 98 3.5 1.0 2.2 1.9 114 chr2R 8185643 intron LRP1 + chr2R 8185700 intron LRP1 + chr2R 8185757 intron LRP1 + chr2R_6_8185001 chr2R_8185001 RAL-837 809 chr2R 8186396 8186436 chr2R 8186714 8186749 14 318 3.5 3.5 3.5 3.1 353 chr2R 8186396 intron LRP1 + chr2R 8186572 intron LRP1 + chr2R 8186749 intron LRP1 + chr2R_14_8185001 chr2R_8185001 RAL-837 810 chr2R 8209585 8209618 chr2R 8209682 8209711 5 94 3.0 2.0 2.5 1.4 126 chr2R 8209585 exon LRP1 + chr2R 8209648 intron LRP1 + chr2R 8209711 intron LRP1 + chr2R_5_8205001 chr2R_8205001 RAL-837 811 chr2R 8236018 8236047 chr2R 8236119 8236147 5 99 4.0 0.5 2.2 1.6 129 chr2R 8236018 intergenic not near genes chr2R 8236082 intergenic not near genes chr2R 8236147 intergenic not near genes chr2R_5_8235001 chr2R_8235001 RAL-837 812 chr2R 8236054 8236060 chr2R 8236118 8236121 5 85 2.5 0.5 1.5 2.0 67 chr2R 8236054 intergenic not near genes chr2R 8236088 intergenic not near genes chr2R 8236121 intergenic not near genes chr2R_5_8235001 chr2R_8235001 RAL-837 813 chr2R 8330847 8330889 chr2R 8331346 8331360 roo 13 496 3.5 4.0 3.8 2.7 513 chr2R 8330847 intron pdm3 + chr2R 8331104 intron pdm3 + chr2R 8331360 intron pdm3 + chr2R_13_8330001 chr2R_8330001 RAL-837 814 chr2R 8339176 8339224 chr2R 8339294 8339342 7 115 4.0 3.0 3.5 1.6 166 chr2R 8339176 intron pdm3 + chr2R 8339259 intron pdm3 + chr2R 8339342 intron pdm3 + chr2R_7_8335001 chr2R_8335001 RAL-837 815 chr2R 8377473 8377519 chr2R 8377575 8377621 18 99 0.5 6.0 3.2 4.3 148 chr2R 8377473 intron pdm3 + chr2R 8377547 intron pdm3 + chr2R 8377621 intron pdm3 + chr2R_18_8375001 chr2R_8375001 RAL-837 816 chr2R 8398229 8398237 chr2R 8403000 8403038 Doc 5 4791 5.0 5.0 5.0 0.8 4809 chr2R 8398229 intron CG2121 - chr2R 8400634 intron CG2121 - chr2R 8403038 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-837 817 chr2R 8403644 8403664 chr2R 8403839 8403856 5 195 8.0 3.0 5.5 0.8 212 chr2R 8403644 intron CG2121 - chr2R 8403750 intron CG2121 - chr2R 8403856 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-837 818 chr2R 8403665 8403672 chr2R 8403837 8403838 4 179 6.0 2.0 4.0 0.8 173 chr2R 8403665 intron CG2121 - chr2R 8403752 intron CG2121 - chr2R 8403838 intron CG2121 - chr2R_4_8400001 chr2R_8400001 RAL-837 819 chr2R 8406058 8406103 chr2R 8406155 8406200 7 89 1.5 1.5 1.5 2.8 142 chr2R 8406058 intron CG2121 - chr2R 8406129 intron CG2121 - chr2R 8406200 intron CG2121 - chr2R_7_8405001 chr2R_8405001 RAL-837 820 chr2R 8414268 8414308 chr2R 8414371 8414411 11 98 5.0 3.0 4.0 2.2 143 chr2R 8414268 intergenic not near genes chr2R 8414340 intergenic not near genes chr2R 8414411 intergenic not near genes chr2R_11_8410001 chr2R_8410001 RAL-837 821 chr2R 8415697 8415731 chr2R 8415800 8415849 11 104 4.5 3.0 3.8 2.3 152 chr2R 8415697 intergenic not near genes chr2R 8415773 intergenic not near genes chr2R 8415849 intergenic not near genes chr2R_11_8415001 chr2R_8415001 RAL-837 822 chr2R 8554104 8554135 chr2R 8554207 8554238 9 103 5.5 7.5 6.5 1.2 134 chr2R 8554104 intergenic not near genes chr2R 8554171 intergenic not near genes chr2R 8554238 intergenic not near genes chr2R_9_8550001 chr2R_8550001 RAL-837 823 chr2R 8658226 8658256 chr2R 8658322 8658332 4 91 2.0 3.5 2.8 1.1 106 chr2R 8658226 intron ptc + chr2R 8658279 intron ptc + chr2R 8658332 intron ptc + chr2R_4_8655001 chr2R_8655001 RAL-837 824 chr2R 8691113 8691144 chr2R 8691602 8691633 7 486 6.5 3.5 5.0 1.2 520 chr2R 8691113 intergenic Jon44E + chr2R 8691373 intergenic Jon44E + chr2R 8691633 exon Jon44E + chr2R_7_8690001 chr2R_8690001 RAL-837 825 chr2R 8714714 8714722 chr2R 8714790 8714829 5 98 0.0 3.5 1.8 1.8 115 chr2R 8714714 3` UTR PGRP-SC1b + chr2R 8714772 3` UTR PGRP-SC1b + chr2R 8714829 3` UTR PGRP-SC1b + chr2R_5_8710001 chr2R_8710001 RAL-837 826 chr2R 8722750 8722795 chr2R 8723003 8723056 pogo 13 252 1.5 3.0 2.2 4.1 306 chr2R 8722750 intron CG14767 - chr2R 8722903 intron CG14767 - chr2R 8723056 intron CG14767 - chr2R_13_8720001 chr2R_8720001 RAL-837 827 chr2R 8742657 8742702 chr2R 8742775 8742820 5 115 2.5 5.0 3.8 1.0 163 chr2R 8742657 intron CG8740 + chr2R 8742738 intron CG8740 + chr2R 8742820 intron CG8740 + chr2R_5_8740001 chr2R_8740001 RAL-837 828 chr2R 8777891 8777942 chr2R 8784102 8784153 diver 4 6208 0.5 3.0 1.8 1.4 6262 chr2R 8777891 intergenic not near genes chr2R 8781022 intergenic not near genes chr2R 8784153 intergenic not near genes chr2R_4_8780001 chr2R_8780001 RAL-837 829 chr2R 8849212 8849259 chr2R 8849310 8849357 11 94 2.5 2.0 2.2 3.4 145 chr2R 8849212 intron sns + chr2R 8849284 intron sns + chr2R 8849357 intron sns + chr2R_11_8845001 chr2R_8845001 RAL-837 830 chr2R 8966143 8966183 chr2R 8966244 8966293 18 106 4.0 5.5 4.8 3.1 150 chr2R 8966143 intron CG8216 - chr2R 8966218 intron CG8216 - chr2R 8966293 intron CG8216 - chr2R_18_8965001 chr2R_8965001 RAL-837 831 chr2R 9047421 9047431 chr2R 9047530 9047535 5 108 2.5 3.0 2.8 1.3 114 chr2R 9047421 intron CG13743 - chr2R 9047478 intron CG13743 - chr2R 9047535 intron CG13743 - chr2R_5_9045001 chr2R_9045001 RAL-837 832 chr2R 9051427 9051450 chr2R 9051534 9051542 6 103 2.5 0.0 1.2 2.7 115 chr2R 9051427 intron CG13743 - chr2R 9051484 intron CG13743 - chr2R 9051542 intron CG13743 - chr2R_6_9050001 chr2R_9050001 RAL-837 833 chr2R 9076116 9076168 chr2R 9076212 9076264 14 91 2.0 2.5 2.2 4.4 148 chr2R 9076116 intron ana + chr2R 9076190 intron ana + chr2R 9076264 intron ana + chr2R_14_9075001 chr2R_9075001 RAL-837 834 chr2R 9078465 9078496 chr2R 9078563 9078594 8 98 6.0 5.0 5.5 1.2 129 chr2R 9078465 intergenic CG8083 + chr2R 9078530 intergenic CG8083 + chr2R 9078594 intergenic CG8083 + chr2R_8_9075001 chr2R_9075001 RAL-837 835 chr2R 9206080 9206130 chr2R 9206183 9206233 13 98 6.5 3.0 4.8 2.2 153 chr2R 9206080 exon CG8027 - chr2R 9206156 exon CG8027 - chr2R 9206233 exon CG8027 - chr2R_13_9205001 chr2R_9205001 RAL-837 836 chr2R 9212694 9212718 chr2R 9213178 9213201 roo 9 497 2.0 1.5 1.8 3.2 507 chr2R 9212694 intergenic CR45309 + chr2R 9212948 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_9_9210001 chr2R_9210001 RAL-837 837 chr2R 9368111 9368143 chr2R 9368207 9368239 5 91 4.0 0.0 2.0 1.7 128 chr2R 9368111 intron CG13954 - chr2R 9368175 intron CG13954 - chr2R 9368239 intron CG13954 - chr2R_5_9365001 chr2R_9365001 RAL-837 838 chr2R 9379921 9379974 chr2R 9380017 9380070 12 90 2.0 4.0 3.0 3.0 149 chr2R 9379921 intron CG13954 - chr2R 9379996 intron CG13954 - chr2R 9380070 intron CG13954 - chr2R_12_9375001 chr2R_9375001 RAL-837 839 chr2R 9407816 9407861 chr2R 9407919 9407949 10 98 3.5 3.0 3.2 2.4 133 chr2R 9407816 intron wun - chr2R 9407882 intron wun - chr2R 9407949 intron wun - chr2R_10_9405001 chr2R_9405001 RAL-837 840 chr2R 9434149 9434151 chr2R 9437820 9437833 5 3674 40.0 27.0 33.5 0.1 3684 chr2R 9434149 intron Pdk + chr2R 9435991 exon ced-6 - chr2R 9437833 intron ced-6 - chr2R_5_9435001 chr2R_9435001 RAL-837 841 chr2R 9434147 9434196 chr2R 9437834 9437867 11 3674 44.0 22.0 33.0 0.3 3720 chr2R 9434147 intron Pdk + chr2R 9436007 intron ced-6 - chr2R 9437867 intron ced-6 - chr2R_11_9435001 chr2R_9435001 RAL-837 842 chr2R 9480059 9480090 chr2R 9490610 9490641 roo 6 10549 12.5 5.0 8.8 0.6 10582 chr2R 9480059 intergenic not near genes chr2R 9485350 intergenic not near genes chr2R 9490641 intergenic not near genes chr2R_6_9485001 chr2R_9485001 RAL-837 843 chr2R 9510665 9510687 chr2R 9510801 9510823 7 133 3.5 5.5 4.5 1.3 158 chr2R 9510665 intron brp + chr2R 9510744 intron brp + chr2R 9510823 intron brp + chr2R_7_9510001 chr2R_9510001 RAL-837 844 chr2R 9561835 9561850 chr2R 9561931 9561958 4 105 0.5 0.5 0.5 2.7 123 chr2R 9561835 3` UTR,intron CR45281 -,CG1809 + chr2R 9561896 3` UTR,intron CR45281 -,CG1809 + chr2R 9561958 3` UTR,intron CR45281 -,CG1809 + chr2R_4_9560001 chr2R_9560001 RAL-837 845 chr2R 9699387 9699438 chr2R 9699494 9699545 15 105 5.5 1.0 3.2 3.6 158 chr2R 9699387 intergenic not near genes chr2R 9699466 intergenic not near genes chr2R 9699545 intergenic not near genes chr2R_15_9695001 chr2R_9695001 RAL-837 846 chr2R 9726619 9726637 chr2R 9734167 9734208 17.6 6 7566 2.5 4.5 3.5 1.3 7589 chr2R 9726619 intron sqa - chr2R 9730414 intron sqa - chr2R 9734208 intron sqa - chr2R_6_9730001 chr2R_9730001 RAL-837 847 chr2R 9871057 9871073 chr2R 9871527 9871579 roo 5 492 0.5 5.0 2.8 1.3 522 chr2R 9871057 intron cbx - chr2R 9871318 intron cbx - chr2R 9871579 intron,5` UTR cbx -,CG18446 + chr2R_5_9870001 chr2R_9870001 RAL-837 848 chr2R 9925900 9925909 chr2R 9926034 9926043 6 133 12.5 2.5 7.5 0.7 143 chr2R 9925900 intron Mef2 - chr2R 9925972 intron Mef2 - chr2R 9926043 intron Mef2 - chr2R_6_9925001 chr2R_9925001 RAL-837 849 chr2R 9925910 9925945 chr2R 9926029 9926047 9 126 5.5 1.5 3.5 2.0 137 chr2R 9925910 intron Mef2 - chr2R 9925978 intron Mef2 - chr2R 9926047 intron Mef2 - chr2R_9_9925001 chr2R_9925001 RAL-837 850 chr2R 9945430 9945464 chr2R 9945646 9945680 BS 10 216 5.5 5.0 5.2 1.6 250 chr2R 9945430 intron Mef2 - chr2R 9945555 intron Mef2 - chr2R 9945680 intron Mef2 - chr2R_10_9945001 chr2R_9945001 RAL-837 851 chr2R 10005541 10005579 chr2R 10005658 10005672 9 112 4.0 0.5 2.2 2.8 131 chr2R 10005541 intron Pka-R2 - chr2R 10005606 intron Pka-R2 - chr2R 10005672 intron Pka-R2 - chr2R_9_10005001 chr2R_10005001 RAL-837 852 chr2R 10005855 10005884 chr2R 10007011 10007033 1360 8 1167 3.5 3.0 3.2 1.9 1178 chr2R 10005855 intron Pka-R2 - chr2R 10006444 intron Pka-R2 - chr2R 10007033 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-837 853 chr2R 10008555 10008569 chr2R 10008653 10008667 7 96 1.5 0.0 0.8 3.9 112 chr2R 10008555 intron Pka-R2 - chr2R 10008611 intron Pka-R2 - chr2R 10008667 intron Pka-R2 - chr2R_7_10005001 chr2R_10005001 RAL-837 854 chr2R 10040885 10040935 chr2R 10040987 10041037 10 102 5.0 4.0 4.5 1.8 152 chr2R 10040885 intron oys - chr2R 10040961 intron oys - chr2R 10041037 intron oys - chr2R_10_10040001 chr2R_10040001 RAL-837 855 chr2R 10047805 10047829 chr2R 10047897 10047932 7 99 7.0 5.5 6.2 1.0 127 chr2R 10047805 intron oys - chr2R 10047868 intron oys - chr2R 10047932 intron oys - chr2R_7_10045001 chr2R_10045001 RAL-837 856 chr2R 10053515 10053538 chr2R 10053632 10053641 5 118 6.0 4.5 5.2 0.8 126 chr2R 10053515 intron magu + chr2R 10053578 intron magu + chr2R 10053641 intron magu + chr2R_5_10050001 chr2R_10050001 RAL-837 857 chr2R 10053544 10053549 chr2R 10053625 10053672 5 114 2.5 3.5 3.0 1.2 128 chr2R 10053544 intron magu + chr2R 10053608 intron magu + chr2R 10053672 intron magu + chr2R_5_10050001 chr2R_10050001 RAL-837 858 chr2R 10132176 10132218 chr2R 10132276 10132298 8 97 1.5 4.5 3.0 2.0 122 chr2R 10132176 intron gem + chr2R 10132237 intron gem + chr2R 10132298 intron gem + chr2R_8_10130001 chr2R_10130001 RAL-837 859 chr2R 10144300 10144349 chr2R 10147091 10147103 9 2766 40.0 31.5 35.8 0.2 2803 chr2R 10144300 intron CG18011 + chr2R 10145702 exon CG18011 + chr2R 10147103 exon KCNQ - chr2R_9_10145001 chr2R_10145001 RAL-837 860 chr2R 10147625 10147676 chr2R 10147728 10147767 11 100 2.5 5.5 4.0 2.2 142 chr2R 10147625 intron KCNQ - chr2R 10147696 intron KCNQ - chr2R 10147767 intron KCNQ - chr2R_11_10145001 chr2R_10145001 RAL-837 861 chr2R 10176115 10176152 chr2R 10176202 10176251 11 93 4.5 2.0 3.2 2.6 136 chr2R 10176115 intron KCNQ - chr2R 10176183 intron KCNQ - chr2R 10176251 intron KCNQ - chr2R_11_10175001 chr2R_10175001 RAL-837 862 chr2R 10176862 10176905 chr2R 10186049 10186072 roo 10 9183 7.5 4.5 6.0 1.4 9210 chr2R 10176862 intron KCNQ - chr2R 10181467 intron KCNQ - chr2R 10186072 intron KCNQ - chr2R_10_10180001 chr2R_10180001 RAL-837 863 chr2R 10246067 10246109 chr2R 10246175 10246202 11 104 5.0 2.0 3.5 2.4 135 chr2R 10246067 3` UTR Hdc + chr2R 10246134 3` UTR CG12209 - chr2R 10246202 3` UTR CG12209 - chr2R_11_10245001 chr2R_10245001 RAL-837 864 chr2R 10266494 10266518 chr2R 10266602 10266629 4 103 4.5 3.0 3.8 0.8 135 chr2R 10266494 intron CG12910 + chr2R 10266562 intron CG12910 + chr2R 10266629 intron CG12910 + chr2R_4_10265001 chr2R_10265001 RAL-837 865 chr2R 10274802 10274820 chr2R 10274898 10274915 8 96 5.5 0.5 3.0 2.0 113 chr2R 10274802 intron CAP + chr2R 10274858 intron CAP + chr2R 10274915 intron CAP + chr2R_8_10270001 chr2R_10270001 RAL-837 866 chr2R 10313294 10313343 chr2R 10313402 10313431 14 102 2.5 5.0 3.8 2.9 137 chr2R 10313294 intergenic not near genes chr2R 10313362 intergenic not near genes chr2R 10313431 intergenic Ndg + chr2R_14_10310001 chr2R_10310001 RAL-837 867 chr2R 10352657 10352679 chr2R 10352754 10352776 4 97 3.5 5.0 4.2 0.8 119 chr2R 10352657 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352716 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352776 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_4_10350001 chr2R_10350001 RAL-837 868 chr2R 10352681 10352704 chr2R 10352748 10352765 8 85 3.0 3.5 3.2 1.9 84 chr2R 10352681 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352723 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352765 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_8_10350001 chr2R_10350001 RAL-837 869 chr2R 10390892 10390933 chr2R 10390993 10391034 12 101 4.0 5.0 4.5 2.2 142 chr2R 10390892 intron CG42732 - chr2R 10390963 intron CG42732 - chr2R 10391034 intron CG42732 - chr2R_12_10390001 chr2R_10390001 RAL-837 870 chr2R 10429011 10429016 chr2R 10429108 10429113 4 97 8.5 4.0 6.2 0.6 102 chr2R 10429011 intergenic not near genes chr2R 10429062 intergenic not near genes chr2R 10429113 intergenic not near genes chr2R_4_10425001 chr2R_10425001 RAL-837 871 chr2R 10429030 10429047 chr2R 10429096 10429144 6 84 6.0 2.0 4.0 1.2 114 chr2R 10429030 intergenic not near genes chr2R 10429087 intergenic not near genes chr2R 10429144 intergenic not near genes chr2R_6_10425001 chr2R_10425001 RAL-837 872 chr2R 10456164 10456201 chr2R 10456265 10456286 5 97 2.0 4.0 3.0 1.2 122 chr2R 10456164 intron,intron Galphao +,Cyp49a1 - chr2R 10456225 intron,intron Galphao +,Cyp49a1 - chr2R 10456286 intron,intron Galphao +,Cyp49a1 - chr2R_5_10455001 chr2R_10455001 RAL-837 873 chr2R 10469007 10469053 chr2R 10469153 10469199 16 144 2.5 4.5 3.5 3.6 192 chr2R 10469007 intron CG11777 + chr2R 10469103 intron CG11777 + chr2R 10469199 intron CG11777 + chr2R_16_10465001 chr2R_10465001 RAL-837 874 chr2R 10528262 10528306 chr2R 10528697 10528741 6 435 6.0 3.5 4.8 1.0 479 chr2R 10528262 intron lola - chr2R 10528502 intron lola - chr2R 10528741 intron lola - chr2R_6_10525001 chr2R_10525001 RAL-837 875 chr2R 10556321 10556381 chr2R 10556426 10556444 12 87 0.0 4.0 2.0 4.0 123 chr2R 10556321 intergenic not near genes chr2R 10556382 intergenic not near genes chr2R 10556444 intergenic not near genes chr2R_12_10555001 chr2R_10555001 RAL-837 876 chr2R 10562962 10563231 chr2R 10563060 10563349 9 94 0.0 0.0 0.0 9.0 387 chr2R 10562962 intron psq + chr2R 10563156 intron psq + chr2R 10563349 intron psq + chr2R_9_10560001 chr2R_10560001 RAL-837 877 chr2R 10563274 10563572 chr2R 10563384 10563657 12 98 4.0 6.5 5.2 1.9 383 chr2R 10563274 intron psq + chr2R 10563466 intron psq + chr2R 10563657 intron psq + chr2R_12_10560001 chr2R_10560001 RAL-837 878 chr2R 10563905 10563919 chr2R 10564115 10564130 6 207 0.0 2.0 1.0 3.0 225 chr2R 10563905 intron psq + chr2R 10564018 intron psq + chr2R 10564130 intron psq + chr2R_6_10560001 chr2R_10560001 RAL-837 879 chr2R 10585577 10585586 chr2R 10594139 10594189 Tirant 4 8589 5.0 1.5 3.2 1.0 8612 chr2R 10585577 intron psq + chr2R 10589883 intron psq + chr2R 10594189 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-837 880 chr2R 10622333 10622379 chr2R 10637118 10637138 mdg1 11 14778 5.5 4.5 5.0 1.8 14805 chr2R 10622333 intron CG11883 + chr2R 10629736 intron CG11883 + chr2R 10637138 intron CG11883 + chr2R_11_10625001 chr2R_10625001 RAL-837 881 chr2R 10748733 10748751 chr2R 10748833 10748851 4 100 3.5 5.0 4.2 0.8 118 chr2R 10748733 intron CG33144 - chr2R 10748792 intron CG33144 - chr2R 10748851 intron CG33144 - chr2R_4_10745001 chr2R_10745001 RAL-837 882 chr2R 10758774 10758825 chr2R 10758893 10758940 19 110 2.5 2.5 2.5 5.4 166 chr2R 10758774 intron CG33144 - chr2R 10758857 intron CG33144 - chr2R 10758940 intron CG33144 - chr2R_19_10755001 chr2R_10755001 RAL-837 883 chr2R 10761541 10761590 chr2R 10761715 10761761 16 172 5.0 2.0 3.5 3.6 220 chr2R 10761541 intron,5` UTR CG33144 -,CR43605 + chr2R 10761651 intron,5` UTR CG33144 -,CR43605 + chr2R 10761761 intron CG33144 - chr2R_16_10760001 chr2R_10760001 RAL-837 884 chr2R 10790131 10790167 chr2R 10790235 10790275 11 106 2.5 3.5 3.0 2.8 144 chr2R 10790131 intron CG33144 - chr2R 10790203 intron CG33144 - chr2R 10790275 intron CG33144 - chr2R_11_10790001 chr2R_10790001 RAL-837 885 chr2R 10790170 10790177 chr2R 10790230 10790255 7 84 1.0 3.0 2.0 2.3 85 chr2R 10790170 intron CG33144 - chr2R 10790212 intron CG33144 - chr2R 10790255 intron CG33144 - chr2R_7_10790001 chr2R_10790001 RAL-837 886 chr2R 10834236 10834285 chr2R 10834688 10834737 13 456 37.0 27.0 32.0 0.4 501 chr2R 10834236 intron CG12344 - chr2R 10834486 intron CG12344 - chr2R 10834737 intron CG12344 - chr2R_13_10830001 chr2R_10830001 RAL-837 887 chr2R 10871633 10871676 chr2R 10871732 10871746 10 95 2.5 4.5 3.5 2.2 113 chr2R 10871633 intron CG30015 - chr2R 10871690 intron CG30015 - chr2R 10871746 intron CG30015 - chr2R_10_10870001 chr2R_10870001 RAL-837 888 chr2R 10976334 10976377 chr2R 10976437 10976448 15 99 3.5 3.0 3.2 3.6 114 chr2R 10976334 intergenic not near genes chr2R 10976391 intergenic not near genes chr2R 10976448 intergenic not near genes chr2R_15_10975001 chr2R_10975001 RAL-837 889 chr2R 11009795 11009838 chr2R 11018989 11019032 roo 7 9184 4.5 1.5 3.0 1.8 9237 chr2R 11009795 intron luna - chr2R 11014414 intron luna - chr2R 11019032 intron luna - chr2R_7_11010001 chr2R_11010001 RAL-837 890 chr2R 11050476 11050527 chr2R 11050572 11050622 5 96 1.5 1.5 1.5 2.0 146 chr2R 11050476 intron luna - chr2R 11050549 intron luna - chr2R 11050622 intron luna - chr2R_5_11050001 chr2R_11050001 RAL-837 891 chr2R 11064684 11064737 chr2R 11064787 11064840 15 98 3.5 5.0 4.2 2.9 156 chr2R 11064684 intron luna - chr2R 11064762 intron luna - chr2R 11064840 intron luna - chr2R_15_11060001 chr2R_11060001 RAL-837 892 chr2R 11071548 11071589 chr2R 11071673 11071708 11 124 3.0 0.5 1.8 3.9 160 chr2R 11071548 intron luna - chr2R 11071628 intron luna - chr2R 11071708 intron luna - chr2R_11_11070001 chr2R_11070001 RAL-837 893 chr2R 11097339 11097384 chr2R 11097462 11097509 12 115 3.0 5.0 4.0 2.4 170 chr2R 11097339 intron luna - chr2R 11097424 intron luna - chr2R 11097509 intron luna - chr2R_12_11095001 chr2R_11095001 RAL-837 894 chr2R 11110406 11110412 chr2R 11110502 11110508 5 96 0.5 4.5 2.5 1.4 102 chr2R 11110406 intron luna - chr2R 11110457 intron luna - chr2R 11110508 intron luna - chr2R_5_11110001 chr2R_11110001 RAL-837 895 chr2R 11155821 11155844 chr2R 11155945 11155964 7 123 1.5 3.0 2.2 2.2 143 chr2R 11155821 intron CG13229 - chr2R 11155892 intron CG13229 - chr2R 11155964 intron CG13229 - chr2R_7_11155001 chr2R_11155001 RAL-837 896 chr2R 11207802 11207845 chr2R 11208015 11208058 BS 9 205 3.0 5.0 4.0 1.8 256 chr2R 11207802 intron shn + chr2R 11207930 intron shn + chr2R 11208058 intron shn + chr2R_9_11205001 chr2R_11205001 RAL-837 897 chr2R 11292964 11292998 chr2R 11293052 11293115 10 94 2.0 0.5 1.2 4.5 151 chr2R 11292964 exon,3` UTR dare -,CG30033 + chr2R 11293040 5` UTR,3` UTR dare -,CG30033 + chr2R 11293115 5` UTR,3` UTR dare -,CG30033 + chr2R_10_11290001 chr2R_11290001 RAL-837 898 chr2R 11297622 11297641 chr2R 11301966 11301985 flea 13 4343 3.0 0.0 1.5 5.2 4363 chr2R 11297622 intergenic CG42336 - chr2R 11299804 intergenic not near genes chr2R 11301985 5` UTR CG7741 + chr2R_13_11295001 chr2R_11295001 RAL-837 899 chr2R 11404788 11404805 chr2R 11404884 11404911 6 103 1.0 7.5 4.2 1.2 123 chr2R 11404788 intergenic not near genes chr2R 11404850 intergenic not near genes chr2R 11404911 intergenic not near genes chr2R_6_11400001 chr2R_11400001 RAL-837 900 chr2R 11415504 11415530 chr2R 11418673 11418699 opus 5 3169 6.0 5.0 5.5 0.8 3195 chr2R 11415504 intron Drip - chr2R 11417102 intron Drip - chr2R 11418699 intron Drip - chr2R_5_11415001 chr2R_11415001 RAL-837 901 chr2R 11423548 11423564 chr2R 11423647 11423664 4 100 3.0 5.0 4.0 0.8 116 chr2R 11423548 intron Drip - chr2R 11423606 intron Drip - chr2R 11423664 intron Drip - chr2R_4_11420001 chr2R_11420001 RAL-837 902 chr2R 11472629 11472674 chr2R 11473845 11473864 pogo 11 1211 4.5 5.0 4.8 1.9 1235 chr2R 11472629 intergenic not near genes chr2R 11473246 intergenic not near genes chr2R 11473864 intergenic not near genes chr2R_11_11470001 chr2R_11470001 RAL-837 903 chr2R 11484349 11484373 chr2R 11484440 11484454 8 88 5.0 6.0 5.5 1.2 105 chr2R 11484349 intron inv + chr2R 11484402 intron inv + chr2R 11484454 intron inv + chr2R_8_11480001 chr2R_11480001 RAL-837 904 chr2R 11484377 11484383 chr2R 11484434 11484480 5 83 3.0 4.5 3.8 1.0 103 chr2R 11484377 intron inv + chr2R 11484428 intron inv + chr2R 11484480 intron inv + chr2R_5_11480001 chr2R_11480001 RAL-837 905 chr2R 11494595 11494631 chr2R 11494694 11494740 10 105 3.0 5.0 4.0 2.0 145 chr2R 11494595 intron inv + chr2R 11494668 intron inv + chr2R 11494740 intron inv + chr2R_10_11490001 chr2R_11490001 RAL-837 906 chr2R 11537195 11537247 chr2R 11537292 11537344 16 92 4.0 2.0 3.0 4.0 149 chr2R 11537195 intergenic not near genes chr2R 11537270 intergenic not near genes chr2R 11537344 intergenic not near genes chr2R_16_11535001 chr2R_11535001 RAL-837 907 chr2R 11538285 11538323 chr2R 11538405 11538443 6 120 3.5 4.5 4.0 1.2 158 chr2R 11538285 intergenic not near genes chr2R 11538364 intergenic not near genes chr2R 11538443 intergenic not near genes chr2R_6_11535001 chr2R_11535001 RAL-837 908 chr2R 11555384 11555422 chr2R 11555733 11555772 5 352 3.0 2.5 2.8 1.3 388 chr2R 11555384 intergenic not near genes chr2R 11555578 intergenic not near genes chr2R 11555772 intergenic not near genes chr2R_5_11555001 chr2R_11555001 RAL-837 909 chr2R 11636387 11636440 chr2R 11636485 11636538 10 89 4.5 3.5 4.0 2.0 151 chr2R 11636387 intron CG9005 - chr2R 11636462 intron CG9005 - chr2R 11636538 intron CG9005 - chr2R_10_11635001 chr2R_11635001 RAL-837 910 chr2R 11672840 11672844 chr2R 11672947 11672951 4 107 3.5 3.5 3.5 0.9 111 chr2R 11672840 intron,exon Roc2 -,Tret1-1 + chr2R 11672896 intron,intron Roc2 -,Tret1-1 + chr2R 11672951 intron,intron Roc2 -,Tret1-1 + chr2R_4_11670001 chr2R_11670001 RAL-837 911 chr2R 11677862 11677894 chr2R 11677960 11677992 12 98 6.0 4.5 5.2 1.9 130 chr2R 11677862 intron,exon Roc2 -,Tret1-2 + chr2R 11677927 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677992 intron,3` UTR Roc2 -,Tret1-2 + chr2R_12_11675001 chr2R_11675001 RAL-837 912 chr2R 11863870 11863882 chr2R 11863977 11863989 4 107 4.0 5.0 4.5 0.7 119 chr2R 11863870 intergenic CG42531 + chr2R 11863930 intergenic CG42531 + chr2R 11863989 intergenic CG42531 + chr2R_4_11860001 chr2R_11860001 RAL-837 913 chr2R 11928672 11928708 chr2R 11928770 11928806 4 98 0.0 2.5 1.2 1.8 134 chr2R 11928672 intergenic not near genes chr2R 11928739 intergenic not near genes chr2R 11928806 intergenic CR44312 - chr2R_4_11925001 chr2R_11925001 RAL-837 914 chr2R 12087263 12087270 chr2R 12087365 12087372 6 102 3.5 8.5 6.0 0.9 109 chr2R 12087263 3` UTR jeb - chr2R 12087318 3` UTR jeb - chr2R 12087372 3` UTR jeb - chr2R_6_12085001 chr2R_12085001 RAL-837 915 chr2R 12093941 12093981 chr2R 12094066 12094114 11 119 6.5 3.5 5.0 1.8 173 chr2R 12093941 intron jeb - chr2R 12094028 intron jeb - chr2R 12094114 intron jeb - chr2R_11_12090001 chr2R_12090001 RAL-837 916 chr2R 12185992 12186037 chr2R 12186098 12186152 22 104 3.5 8.0 5.8 3.2 160 chr2R 12185992 intron Cyp6g1 + chr2R 12186072 intron Cyp6g1 + chr2R 12186152 intron Cyp6g1 + chr2R_22_12185001 chr2R_12185001 RAL-837 917 chr2R 12187476 12187496 chr2R 12190072 12190099 22 2602 81.0 71.0 76.0 0.3 2623 chr2R 12187476 exon Cyp6g1 + chr2R 12188788 exon Cyp6g2 - chr2R 12190099 exon Cyp6g2 - chr2R_22_12185001 chr2R_12185001 RAL-837 918 chr2R 12187474 12187522 chr2R 12190100 12190123 30 2611 92.5 62.0 77.2 0.4 2649 chr2R 12187474 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190123 exon Cyp6g2 - chr2R_30_12185001 chr2R_12185001 RAL-837 919 chr2R 12235414 12235428 chr2R 12235522 12235568 10 136 3.5 2.5 3.0 2.5 154 chr2R 12235414 intergenic not near genes chr2R 12235491 intergenic not near genes chr2R 12235568 intergenic not near genes chr2R_10_12235001 chr2R_12235001 RAL-837 920 chr2R 12272316 12272348 chr2R 12272419 12272451 8 101 3.5 5.0 4.2 1.5 135 chr2R 12272316 intron Cam + chr2R 12272384 intron Cam + chr2R 12272451 intron Cam + chr2R_8_12270001 chr2R_12270001 RAL-837 921 chr2R 12363365 12363414 chr2R 12363817 12363848 15 448 2.0 5.0 3.5 3.3 483 chr2R 12363365 intergenic CG30043 + chr2R 12363606 intergenic CG30043 + chr2R 12363848 intergenic not near genes chr2R_15_12360001 chr2R_12360001 RAL-837 922 chr2R 12377485 12377525 chr2R 12377621 12377667 18 135 6.5 5.0 5.8 2.6 182 chr2R 12377485 intergenic Cpr49Aa + chr2R 12377576 intergenic Cpr49Aa + chr2R 12377667 intergenic Cpr49Aa + chr2R_18_12375001 chr2R_12375001 RAL-837 923 chr2R 12501670 12501724 chr2R 12503852 12503906 Rt1c 5 2174 1.0 4.0 2.5 1.4 2236 chr2R 12501670 intron fdl - chr2R 12502788 intron fdl - chr2R 12503906 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-837 924 chr2R 12536127 12536165 chr2R 12536223 12536273 12 104 3.0 1.5 2.2 3.8 146 chr2R 12536127 intron fra + chr2R 12536200 intron fra + chr2R 12536273 intron fra + chr2R_12_12535001 chr2R_12535001 RAL-837 925 chr2R 12617649 12617673 chr2R 12617763 12617776 10 112 2.5 1.0 1.8 3.6 127 chr2R 12617649 intron,intron CG45086 +,Galphaq + chr2R 12617712 intron,intron CG45086 +,Galphaq + chr2R 12617776 intron,intron CG45086 +,Galphaq + chr2R_10_12615001 chr2R_12615001 RAL-837 926 chr2R 12617679 12617692 chr2R 12617760 12617793 5 105 1.0 1.0 1.0 2.5 114 chr2R 12617679 intron,intron CG45086 +,Galphaq + chr2R 12617736 intron,intron CG45086 +,Galphaq + chr2R 12617793 intron,intron CG45086 +,Galphaq + chr2R_5_12615001 chr2R_12615001 RAL-837 927 chr2R 12656582 12656635 chr2R 12656680 12656733 17 93 3.5 3.0 3.2 4.0 151 chr2R 12656582 intron CG8646 + chr2R 12656658 intron CG8646 + chr2R 12656733 intron CG8646 + chr2R_17_12655001 chr2R_12655001 RAL-837 928 chr2R 12673972 12673994 chr2R 12674088 12674110 7 114 6.5 2.0 4.2 1.3 138 chr2R 12673972 intron CG42708 - chr2R 12674041 intron CG42708 - chr2R 12674110 intron CG42708 - chr2R_7_12670001 chr2R_12670001 RAL-837 929 chr2R 12674006 12674023 chr2R 12674084 12674129 6 98 4.0 2.0 3.0 1.5 123 chr2R 12674006 intron CG42708 - chr2R 12674068 intron CG42708 - chr2R 12674129 intron CG42708 - chr2R_6_12670001 chr2R_12670001 RAL-837 930 chr2R 12702305 12702351 chr2R 12702406 12702453 7 97 2.5 5.5 4.0 1.4 148 chr2R 12702305 intergenic not near genes chr2R 12702379 intergenic not near genes chr2R 12702453 intergenic not near genes chr2R_7_12700001 chr2R_12700001 RAL-837 931 chr2R 12707514 12707536 chr2R 12715897 12715922 roo 8 8385 0.5 4.5 2.5 2.3 8408 chr2R 12707514 intron CG42663 + chr2R 12711718 intron CG42663 + chr2R 12715922 intron CG42663 + chr2R_8_12710001 chr2R_12710001 RAL-837 932 chr2R 12733562 12733577 chr2R 12733678 12733694 9 116 7.5 2.5 5.0 1.5 132 chr2R 12733562 intron CG42663 + chr2R 12733628 intron CG42663 + chr2R 12733694 intron CG42663 + chr2R_9_12730001 chr2R_12730001 RAL-837 933 chr2R 12733585 12733603 chr2R 12733670 12733687 6 101 3.5 1.5 2.5 1.7 102 chr2R 12733585 intron CG42663 + chr2R 12733636 intron CG42663 + chr2R 12733687 intron CG42663 + chr2R_6_12730001 chr2R_12730001 RAL-837 934 chr2R 12789304 12789324 chr2R 12797687 12797692 roo 6 8378 6.0 7.0 6.5 0.8 8388 chr2R 12789304 intron,3` UTR sca +,CR45137 - chr2R 12793498 intron,intron sca +,CR45137 - chr2R 12797692 intron,3` UTR sca +,CR45137 - chr2R_6_12790001 chr2R_12790001 RAL-837 935 chr2R 12952646 12952672 chr2R 12952741 12952767 7 96 4.5 5.5 5.0 1.2 121 chr2R 12952646 intergenic CG44251 -,CG44250 -,CG13321 + chr2R 12952706 intergenic CG13321 +,CG44251 -,CG44250 - chr2R 12952767 intergenic CG13321 +,CG44251 -,CG44250 - chr2R_7_12950001 chr2R_12950001 RAL-837 936 chr2R 13050619 13050662 chr2R 13050967 13050984 4 342 0.0 4.0 2.0 1.3 365 chr2R 13050619 intergenic not near genes chr2R 13050802 intergenic not near genes chr2R 13050984 intergenic not near genes chr2R_4_13050001 chr2R_13050001 RAL-837 937 chr2R 13092333 13092368 chr2R 13092463 13092508 11 135 2.5 3.0 2.8 2.9 175 chr2R 13092333 intergenic not near genes chr2R 13092420 intergenic not near genes chr2R 13092508 intergenic not near genes chr2R_11_13090001 chr2R_13090001 RAL-837 938 chr2R 13136827 13136834 chr2R 13141645 13141652 Doc 4 4818 6.5 4.0 5.2 0.6 4825 chr2R 13136827 exon Cap-G + chr2R 13139240 intron Cap-G + chr2R 13141652 intron Cap-G + chr2R_4_13135001 chr2R_13135001 RAL-837 939 chr2R 13136839 13136860 chr2R 13141642 13141678 Doc 7 4810 4.5 3.5 4.0 1.4 4839 chr2R 13136839 exon Cap-G + chr2R 13139258 intron Cap-G + chr2R 13141678 intron Cap-G + chr2R_7_13135001 chr2R_13135001 RAL-837 940 chr2R 13136862 13136866 chr2R 13141630 13141673 Doc 4 4800 4.0 3.0 3.5 0.9 4811 chr2R 13136862 intron Cap-G + chr2R 13139268 intron Cap-G + chr2R 13141673 intron Cap-G + chr2R_4_13135001 chr2R_13135001 RAL-837 941 chr2R 13368737 13368784 chr2R 13368868 13368904 5 128 4.0 0.0 2.0 1.7 167 chr2R 13368737 intergenic not near genes chr2R 13368820 intergenic not near genes chr2R 13368904 intergenic not near genes chr2R_5_13365001 chr2R_13365001 RAL-837 942 chr2R 13426955 13426987 chr2R 13427058 13427089 6 97 7.0 4.5 5.8 0.9 134 chr2R 13426955 intron CG42321 - chr2R 13427022 intron CG42321 - chr2R 13427089 intron CG42321 - chr2R_6_13425001 chr2R_13425001 RAL-837 943 chr2R 13432916 13432969 chr2R 13433012 13433065 10 91 4.0 7.0 5.5 1.5 149 chr2R 13432916 intron CG42321 - chr2R 13432990 intron CG42321 - chr2R 13433065 intron,5` UTR CG42321 -,CG30065 + chr2R_10_13430001 chr2R_13430001 RAL-837 944 chr2R 13439090 13439227 chr2R 13439225 13439323 14 130 0.5 0.0 0.2 11.7 233 chr2R 13439090 intergenic CG42321 -,cnn - chr2R 13439206 intergenic cnn -,CG42321 - chr2R 13439323 3` UTR cnn - chr2R_14_13435001 chr2R_13435001 RAL-837 945 chr2R 13449663 13449683 chr2R 13449757 13449761 6 92 0.0 0.0 0.0 6.0 98 chr2R 13449663 intron cnn - chr2R 13449712 intron cnn - chr2R 13449761 intron cnn - chr2R_6_13445001 chr2R_13445001 RAL-837 946 chr2R 13471612 13471636 chr2R 13471716 13471731 7 103 0.0 5.5 2.8 1.8 119 chr2R 13471612 intron arr - chr2R 13471672 intron arr - chr2R 13471731 intron arr - chr2R_7_13470001 chr2R_13470001 RAL-837 947 chr2R 13532501 13532538 chr2R 13532637 13532642 7 128 2.0 3.0 2.5 2.0 141 chr2R 13532501 intron Vmat - chr2R 13532572 intron Vmat - chr2R 13532642 intron Vmat - chr2R_7_13530001 chr2R_13530001 RAL-837 948 chr2R 13544540 13544590 chr2R 13544636 13544686 8 95 0.5 4.5 2.5 2.3 146 chr2R 13544540 intron CG6145 - chr2R 13544613 intron CG6145 - chr2R 13544686 intron CG6145 - chr2R_8_13540001 chr2R_13540001 RAL-837 949 chr2R 13547066 13547105 chr2R 13547281 13547319 14 213 5.0 7.0 6.0 2.0 253 chr2R 13547066 intron CG6145 - chr2R 13547192 intron CG6145 - chr2R 13547319 intron CG6145 - chr2R_14_13545001 chr2R_13545001 RAL-837 950 chr2R 13602652 13602675 chr2R 13602751 13602774 8 99 2.5 13.5 8.0 0.9 122 chr2R 13602652 intergenic not near genes chr2R 13602713 intergenic not near genes chr2R 13602774 intergenic not near genes chr2R_8_13600001 chr2R_13600001 RAL-837 951 chr2R 13634140 13634173 chr2R 13634236 13634280 7 102 2.0 6.0 4.0 1.4 140 chr2R 13634140 intron fas + chr2R 13634210 intron fas + chr2R 13634280 intron fas + chr2R_7_13630001 chr2R_13630001 RAL-837 952 chr2R 13642040 13642085 chr2R 13642136 13642141 8 81 6.0 5.0 5.5 1.2 101 chr2R 13642040 intron fas + chr2R 13642090 intron fas + chr2R 13642141 intron fas + chr2R_8_13640001 chr2R_13640001 RAL-837 953 chr2R 13652518 13652572 chr2R 13652796 13652805 13 269 4.5 4.5 4.5 2.4 287 chr2R 13652518 intron fas + chr2R 13652662 intron fas + chr2R 13652805 intron fas + chr2R_13_13650001 chr2R_13650001 RAL-837 954 chr2R 13657549 13657596 chr2R 13657655 13657702 12 101 3.5 2.0 2.8 3.2 153 chr2R 13657549 intron fas + chr2R 13657626 intron fas + chr2R 13657702 intron fas + chr2R_12_13655001 chr2R_13655001 RAL-837 955 chr2R 13704240 13704282 chr2R 13704350 13704392 7 109 4.0 0.5 2.2 2.2 152 chr2R 13704240 intron fas + chr2R 13704316 intron fas + chr2R 13704392 intron fas + chr2R_7_13700001 chr2R_13700001 RAL-837 956 chr2R 13709841 13709851 chr2R 13709944 13709964 6 111 3.5 2.0 2.8 1.6 123 chr2R 13709841 intron fas + chr2R 13709902 intron fas + chr2R 13709964 intron fas + chr2R_6_13705001 chr2R_13705001 RAL-837 957 chr2R 13721192 13721220 chr2R 13721295 13721323 4 103 2.5 4.0 3.2 1.0 131 chr2R 13721192 intron fas + chr2R 13721258 intron fas + chr2R 13721323 intron fas + chr2R_4_13720001 chr2R_13720001 RAL-837 958 chr2R 13728117 13728161 chr2R 13735794 13735817 opus 17 7673 7.0 6.0 6.5 2.3 7700 chr2R 13728117 intron fas + chr2R 13731967 intron fas + chr2R 13735817 intron fas + chr2R_17_13730001 chr2R_13730001 RAL-837 959 chr2R 13768975 13769002 chr2R 13769094 13769117 5 116 3.5 5.0 4.2 1.0 142 chr2R 13768975 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769117 intergenic not near genes chr2R_5_13765001 chr2R_13765001 RAL-837 960 chr2R 13861424 13861457 chr2R 13861519 13861557 6 98 2.0 6.5 4.2 1.2 133 chr2R 13861424 intron CG16935 - chr2R 13861490 intron CG16935 - chr2R 13861557 intron CG16935 - chr2R_6_13860001 chr2R_13860001 RAL-837 961 chr2R 13905618 13905629 chr2R 13907585 13907631 Rt1a 6 1990 3.0 3.5 3.2 1.4 2013 chr2R 13905618 intron shot - chr2R 13906624 intron shot - chr2R 13907631 intron shot - chr2R_6_13905001 chr2R_13905001 RAL-837 962 chr2R 13922624 13922655 chr2R 13922701 13922751 9 94 3.0 3.5 3.2 2.1 127 chr2R 13922624 intron shot - chr2R 13922688 intron shot - chr2R 13922751 intron shot - chr2R_9_13920001 chr2R_13920001 RAL-837 963 chr2R 14018142 14018188 chr2R 14018246 14018292 14 102 4.0 7.0 5.5 2.2 150 chr2R 14018142 intron mam + chr2R 14018217 intron mam + chr2R 14018292 intron mam + chr2R_14_14015001 chr2R_14015001 RAL-837 964 chr2R 14037242 14037283 chr2R 14037345 14037386 4 103 0.0 2.0 1.0 2.0 144 chr2R 14037242 intron mam + chr2R 14037314 intron mam + chr2R 14037386 intron mam + chr2R_4_14035001 chr2R_14035001 RAL-837 965 chr2R 14137479 14137514 chr2R 14137603 14137638 8 121 4.0 7.0 5.5 1.2 159 chr2R 14137479 intron Prosap - chr2R 14137558 intron Prosap - chr2R 14137638 intron Prosap - chr2R_8_14135001 chr2R_14135001 RAL-837 966 chr2R 14141934 14141957 chr2R 14142058 14142062 4 120 6.0 6.0 6.0 0.6 128 chr2R 14141934 intergenic not near genes chr2R 14141998 intergenic not near genes chr2R 14142062 intergenic not near genes chr2R_4_14140001 chr2R_14140001 RAL-837 967 chr2R 14168347 14168391 chr2R 14168456 14168500 10 106 6.0 5.5 5.8 1.5 153 chr2R 14168347 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168424 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168500 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_10_14165001 chr2R_14165001 RAL-837 968 chr2R 14171457 14171498 chr2R 14171567 14171608 13 110 3.0 4.0 3.5 2.9 151 chr2R 14171457 intron CG8331 + chr2R 14171532 intron CG8331 + chr2R 14171608 intron CG8331 + chr2R_13_14170001 chr2R_14170001 RAL-837 969 chr2R 14357551 14357568 chr2R 14357656 14357678 9 109 5.5 4.0 4.8 1.6 127 chr2R 14357551 intergenic CG8617 -,Arc1 - chr2R 14357614 intergenic Arc1 -,CG8617 - chr2R 14357678 intergenic Arc1 -,CG8617 - chr2R_9_14355001 chr2R_14355001 RAL-837 970 chr2R 14373481 14373511 chr2R 14373588 14373596 8 101 8.0 3.5 5.8 1.2 115 chr2R 14373481 exon Obp50d + chr2R 14373538 exon Obp50d + chr2R 14373596 exon Obp50d + chr2R_8_14370001 chr2R_14370001 RAL-837 971 chr2R 14373515 14373523 chr2R 14373582 14373630 4 88 6.5 2.5 4.5 0.7 115 chr2R 14373515 exon Obp50d + chr2R 14373572 exon Obp50d + chr2R 14373630 exon Obp50d + chr2R_4_14370001 chr2R_14370001 RAL-837 972 chr2R 14438832 14438846 chr2R 14438936 14438950 5 104 5.5 4.0 4.8 0.9 118 chr2R 14438832 intron Oaz + chr2R 14438891 intron Oaz + chr2R 14438950 intron Oaz + chr2R_5_14435001 chr2R_14435001 RAL-837 973 chr2R 14467275 14467323 chr2R 14476447 14476460 roo 15 9166 3.0 6.0 4.5 2.7 9185 chr2R 14467275 intergenic not near genes chr2R 14471868 intergenic not near genes chr2R 14476460 5` UTR CR44462 + chr2R_15_14470001 chr2R_14470001 RAL-837 974 chr2R 14514465 14514497 chr2R 14514581 14514613 7 107 3.0 5.5 4.2 1.3 148 chr2R 14514465 intron,intron Cpr51A -,CG30197 + chr2R 14514539 intron,intron Cpr51A -,CG30197 + chr2R 14514613 intron,intron Cpr51A -,CG30197 + chr2R_7_14510001 chr2R_14510001 RAL-837 975 chr2R 14530350 14530376 chr2R 14530459 14530483 6 106 8.0 5.5 6.8 0.8 133 chr2R 14530350 intron ttv + chr2R 14530416 intron ttv + chr2R 14530483 intron ttv + chr2R_6_14530001 chr2R_14530001 RAL-837 976 chr2R 14530739 14530775 chr2R 14530841 14530845 6 93 1.0 4.5 2.8 1.6 106 chr2R 14530739 intron ttv + chr2R 14530792 intron ttv + chr2R 14530845 intron ttv + chr2R_6_14530001 chr2R_14530001 RAL-837 977 chr2R 14533765 14533772 chr2R 14533867 14533873 4 101 3.0 2.0 2.5 1.1 108 chr2R 14533765 intron ttv + chr2R 14533819 intron ttv + chr2R 14533873 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-837 978 chr2R 14541204 14541248 chr2R 14541481 14541525 6 271 3.5 2.0 2.8 1.6 321 chr2R 14541204 intron ttv + chr2R 14541364 intron ttv + chr2R 14541525 intron ttv + chr2R_6_14540001 chr2R_14540001 RAL-837 979 chr2R 14565551 14565593 chr2R 14565645 14565670 17 95 3.5 6.0 4.8 2.9 119 chr2R 14565551 intron ttv + chr2R 14565610 intron ttv + chr2R 14565670 intron ttv + chr2R_17_14565001 chr2R_14565001 RAL-837 980 chr2R 14653902 14653925 chr2R 14654002 14654045 8 111 4.0 1.0 2.5 2.3 143 chr2R 14653902 intergenic not near genes chr2R 14653974 intergenic not near genes chr2R 14654045 intergenic not near genes chr2R_8_14650001 chr2R_14650001 RAL-837 981 chr2R 14722292 14722301 chr2R 14722416 14722425 6 124 6.5 4.0 5.2 1.0 133 chr2R 14722292 intergenic not near genes chr2R 14722358 intergenic not near genes chr2R 14722425 intergenic not near genes chr2R_6_14720001 chr2R_14720001 RAL-837 982 chr2R 14786014 14786019 chr2R 14786127 14786127 4 112 0.5 5.0 2.8 1.1 113 chr2R 14786014 intron kn - chr2R 14786070 intron kn - chr2R 14786127 intron kn - chr2R_4_14785001 chr2R_14785001 RAL-837 983 chr2R 14786025 14786043 chr2R 14786122 14786146 4 102 0.5 3.5 2.0 1.3 121 chr2R 14786025 intron kn - chr2R 14786086 intron kn - chr2R 14786146 intron kn - chr2R_4_14785001 chr2R_14785001 RAL-837 984 chr2R 14799871 14799895 chr2R 14799939 14799986 10 91 1.5 6.5 4.0 2.0 115 chr2R 14799871 intron kn - chr2R 14799928 intron kn - chr2R 14799986 intron kn - chr2R_10_14795001 chr2R_14795001 RAL-837 985 chr2R 14803456 14803505 chr2R 14803556 14803585 4 95 0.0 4.0 2.0 1.3 129 chr2R 14803456 intron kn - chr2R 14803520 intron kn - chr2R 14803585 intron kn - chr2R_4_14800001 chr2R_14800001 RAL-837 986 chr2R 14889200 14889223 chr2R 14897818 14897826 Max-element 8 8620 5.0 0.0 2.5 2.3 8626 chr2R 14889200 intergenic Cyp6a8 - chr2R 14893513 intergenic not near genes chr2R 14897826 intergenic not near genes chr2R_8_14890001 chr2R_14890001 RAL-837 987 chr2R 14911688 14911718 chr2R 14911830 14911851 13 139 5.0 4.5 4.8 2.2 163 chr2R 14911688 intron CG10249 - chr2R 14911770 intron CG10249 - chr2R 14911851 intron CG10249 - chr2R_13_14910001 chr2R_14910001 RAL-837 988 chr2R 14922122 14922168 chr2R 14922218 14922233 12 90 5.0 2.5 3.8 2.5 111 chr2R 14922122 intron CG10249 - chr2R 14922178 intron CG10249 - chr2R 14922233 intron CG10249 - chr2R_12_14920001 chr2R_14920001 RAL-837 989 chr2R 14954726 14954785 chr2R 14954822 14954881 11 92 1.5 1.0 1.2 5.0 155 chr2R 14954726 intron aPKC - chr2R 14954804 intron aPKC - chr2R 14954881 intron aPKC - chr2R_11_14950001 chr2R_14950001 RAL-837 990 chr2R 14955655 14955670 chr2R 14955764 14955779 8 108 6.0 1.5 3.8 1.7 124 chr2R 14955655 intron aPKC - chr2R 14955717 intron aPKC - chr2R 14955779 intron aPKC - chr2R_8_14955001 chr2R_14955001 RAL-837 991 chr2R 14955672 14955701 chr2R 14955753 14955763 10 95 3.5 1.5 2.5 2.9 91 chr2R 14955672 intron aPKC - chr2R 14955718 intron aPKC - chr2R 14955763 intron aPKC - chr2R_10_14955001 chr2R_14955001 RAL-837 992 chr2R 14957650 14957673 chr2R 14957765 14957788 7 115 2.5 1.5 2.0 2.3 138 chr2R 14957650 intron aPKC - chr2R 14957719 intron aPKC - chr2R 14957788 intron aPKC - chr2R_7_14955001 chr2R_14955001 RAL-837 993 chr2R 15004751 15004763 chr2R 15005098 15005112 jockey 6 348 5.0 0.5 2.8 1.6 361 chr2R 15004751 intergenic not near genes chr2R 15004932 intergenic not near genes chr2R 15005112 intergenic not near genes chr2R_6_15000001 chr2R_15000001 RAL-837 994 chr2R 15015437 15015485 chr2R 15022880 15022929 mdg1 8 7444 1.5 0.5 1.0 4.0 7492 chr2R 15015437 intron hbs + chr2R 15019183 intron hbs + chr2R 15022929 intron hbs + chr2R_8_15015001 chr2R_15015001 RAL-837 995 chr2R 15051066 15051109 chr2R 15051165 15051211 16 101 5.0 6.5 5.8 2.4 145 chr2R 15051066 intergenic not near genes chr2R 15051138 intergenic not near genes chr2R 15051211 intergenic not near genes chr2R_16_15050001 chr2R_15050001 RAL-837 996 chr2R 15066476 15066502 chr2R 15066589 15066615 4 113 7.5 4.0 5.8 0.6 139 chr2R 15066476 intergenic not near genes chr2R 15066546 intergenic not near genes chr2R 15066615 intergenic not near genes chr2R_4_15065001 chr2R_15065001 RAL-837 997 chr2R 15066504 15066524 chr2R 15066587 15066616 5 91 3.5 2.5 3.0 1.2 112 chr2R 15066504 intergenic not near genes chr2R 15066560 intergenic not near genes chr2R 15066616 intergenic not near genes chr2R_5_15065001 chr2R_15065001 RAL-837 998 chr2R 15119298 15119343 chr2R 15127799 15127811 Tirant 10 8498 3.5 4.0 3.8 2.1 8513 chr2R 15119298 intron chn + chr2R 15123554 intron chn + chr2R 15127811 intron chn + chr2R_10_15120001 chr2R_15120001 RAL-837 999 chr2R 15133473 15133514 chr2R 15133572 15133613 5 93 1.5 5.0 3.2 1.2 140 chr2R 15133473 intron chn + chr2R 15133543 intron chn + chr2R 15133613 intron chn + chr2R_5_15130001 chr2R_15130001 RAL-837 1000 chr2R 15137959 15138000 chr2R 15138054 15138082 6 91 4.5 1.5 3.0 1.5 123 chr2R 15137959 intron chn + chr2R 15138020 intron chn + chr2R 15138082 intron chn + chr2R_6_15135001 chr2R_15135001 RAL-837 1001 chr2R 15187987 15188029 chr2R 15188092 15188118 16 102 4.5 5.0 4.8 2.8 131 chr2R 15187987 intron igl + chr2R 15188052 intron igl + chr2R 15188118 intron igl + chr2R_16_15185001 chr2R_15185001 RAL-837 1002 chr2R 15235060 15235092 chr2R 15235194 15235204 11 130 0.5 5.0 2.8 2.9 144 chr2R 15235060 intron Fs - chr2R 15235132 intron Fs - chr2R 15235204 intron Fs - chr2R_11_15235001 chr2R_15235001 RAL-837 1003 chr2R 15374789 15375060 chr2R 15374892 15375190 4 116 4.5 0.5 2.5 1.1 401 chr2R 15374789 intergenic not near genes chr2R 15374990 intergenic not near genes chr2R 15375190 intergenic not near genes chr2R_4_15370001 chr2R_15370001 RAL-837 1004 chr2R 15375064 15375074 chr2R 15375194 15375204 5 128 3.5 0.5 2.0 1.7 140 chr2R 15375064 intergenic not near genes chr2R 15375134 intergenic not near genes chr2R 15375204 intergenic not near genes chr2R_5_15375001 chr2R_15375001 RAL-837 1005 chr2R 15408474 15408490 chr2R 15408589 15408611 5 117 3.0 6.0 4.5 0.9 137 chr2R 15408474 intron CG43729 + chr2R 15408542 intron CG43729 + chr2R 15408611 intron CG43729 + chr2R_5_15405001 chr2R_15405001 RAL-837 1006 chr2R 15428117 15428150 chr2R 15428250 15428284 7 132 3.0 5.5 4.2 1.3 167 chr2R 15428117 intron CG43729 + chr2R 15428200 intron CG43729 + chr2R 15428284 intron CG43729 + chr2R_7_15425001 chr2R_15425001 RAL-837 1007 chr2R 15443096 15443123 chr2R 15443217 15443231 4 118 2.0 6.5 4.2 0.8 135 chr2R 15443096 intron CG43729 + chr2R 15443164 intron CG43729 + chr2R 15443231 intron CG43729 + chr2R_4_15440001 chr2R_15440001 RAL-837 1008 chr2R 15472027 15472061 chr2R 15472131 15472155 6 101 0.0 2.0 1.0 3.0 128 chr2R 15472027 intergenic CG43729 +,CG8180 - chr2R 15472091 intergenic CG8180 -,CG43729 + chr2R 15472155 intergenic CG8180 -,CG43729 + chr2R_6_15470001 chr2R_15470001 RAL-837 1009 chr2R 15498145 15498189 chr2R 15498242 15498293 4 101 2.0 0.0 1.0 2.0 148 chr2R 15498145 intergenic not near genes chr2R 15498219 intergenic not near genes chr2R 15498293 intergenic not near genes chr2R_4_15495001 chr2R_15495001 RAL-837 1010 chr2R 15606112 15606126 chr2R 15606209 15606223 7 97 5.5 3.0 4.2 1.3 111 chr2R 15606112 intergenic not near genes chr2R 15606168 intergenic not near genes chr2R 15606223 intergenic not near genes chr2R_7_15605001 chr2R_15605001 RAL-837 1011 chr2R 15645658 15645694 chr2R 15645774 15645778 5 105 4.0 0.0 2.0 1.7 120 chr2R 15645658 intron CG42524 + chr2R 15645718 intron CG42524 + chr2R 15645778 intron CG42524 + chr2R_5_15645001 chr2R_15645001 RAL-837 1012 chr2R 15697885 15697908 chr2R 15697973 15697993 13 98 3.5 0.0 1.8 4.6 108 chr2R 15697885 exon CG33462 + chr2R 15697939 3` UTR CG33462 + chr2R 15697993 3` UTR CG33462 + chr2R_13_15695001 chr2R_15695001 RAL-837 1013 chr2R 15719553 15719577 chr2R 15719632 15719640 8 82 1.0 4.0 2.5 2.3 87 chr2R 15719553 intergenic not near genes chr2R 15719596 intergenic not near genes chr2R 15719640 intergenic not near genes chr2R_8_15715001 chr2R_15715001 RAL-837 1014 chr2R 15869315 15869363 chr2R 15869415 15869463 7 96 0.5 3.5 2.0 2.3 148 chr2R 15869315 intergenic Rif1 -,sli - chr2R 15869389 intergenic sli -,Rif1 - chr2R 15869463 intergenic sli -,Rif1 - chr2R_7_15865001 chr2R_15865001 RAL-837 1015 chr2R 15987929 15987978 chr2R 15988028 15988077 10 99 2.0 1.0 1.5 4.0 148 chr2R 15987929 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988003 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988077 intron,5` UTR Strn-Mlck -,CR45021 + chr2R_10_15985001 chr2R_15985001 RAL-837 1016 chr2R 16033491 16033523 chr2R 16033588 16033620 8 102 5.0 0.0 2.5 2.3 129 chr2R 16033491 intron SP2353 + chr2R 16033556 intron SP2353 + chr2R 16033620 intron SP2353 + chr2R_8_16030001 chr2R_16030001 RAL-837 1017 chr2R 16136622 16136646 chr2R 16136719 16136743 7 94 4.0 2.5 3.2 1.7 121 chr2R 16136622 intron spin + chr2R 16136682 intron spin + chr2R 16136743 intron spin + chr2R_7_16135001 chr2R_16135001 RAL-837 1018 chr2R 16208242 16208257 chr2R 16208358 16208367 4 114 4.5 7.0 5.8 0.6 125 chr2R 16208242 intron mrj - chr2R 16208304 intron mrj - chr2R 16208367 intron mrj - chr2R_4_16205001 chr2R_16205001 RAL-837 1019 chr2R 16245610 16245662 chr2R 16245718 16245748 8 104 2.5 3.5 3.0 2.0 138 chr2R 16245610 intron CngA - chr2R 16245679 intron CngA - chr2R 16245748 intron CngA - chr2R_8_16245001 chr2R_16245001 RAL-837 1020 chr2R 16406704 16406747 chr2R 16406802 16406845 12 95 3.5 3.0 3.2 2.9 141 chr2R 16406704 intron Sema-2b + chr2R 16406774 intron Sema-2b + chr2R 16406845 intron Sema-2b + chr2R_12_16405001 chr2R_16405001 RAL-837 1021 chr2R 16532452 16532493 chr2R 16532565 16532606 11 109 7.0 4.0 5.5 1.7 154 chr2R 16532452 3` UTR Sema-2a + chr2R 16532529 3` UTR Sema-2a + chr2R 16532606 3` UTR Sema-2a + chr2R_11_16530001 chr2R_16530001 RAL-837 1022 chr2R 16544846 16544863 chr2R 16544941 16544967 10 103 0.0 0.5 0.2 8.3 121 chr2R 16544846 intergenic not near genes chr2R 16544906 intergenic not near genes chr2R 16544967 intergenic not near genes chr2R_10_16540001 chr2R_16540001 RAL-837 1023 chr2R 16547011 16547027 chr2R 16547082 16547105 4 78 1.0 0.0 0.5 2.7 94 chr2R 16547011 intergenic not near genes chr2R 16547058 intergenic not near genes chr2R 16547105 intergenic not near genes chr2R_4_16545001 chr2R_16545001 RAL-837 1024 chr2R 16552090 16552113 chr2R 16552241 16552259 4 146 4.5 7.0 5.8 0.6 169 chr2R 16552090 intergenic Syn2 + chr2R 16552174 intergenic Syn2 + chr2R 16552259 5` UTR Syn2 + chr2R_4_16550001 chr2R_16550001 RAL-837 1025 chr2R 16571854 16571894 chr2R 16571969 16571994 7 110 4.5 4.0 4.2 1.3 140 chr2R 16571854 intergenic CG4927 + chr2R 16571924 intergenic CG4927 + chr2R 16571994 intergenic CG4927 + chr2R_7_16570001 chr2R_16570001 RAL-837 1026 chr2R 16577902 16577941 chr2R 16578328 16578338 6 418 2.0 3.5 2.8 1.6 436 chr2R 16577902 intergenic not near genes chr2R 16578120 intergenic not near genes chr2R 16578338 intergenic not near genes chr2R_6_16575001 chr2R_16575001 RAL-837 1027 chr2R 16617066 16617084 chr2R 16617139 16617183 7 91 3.5 2.0 2.8 1.8 117 chr2R 16617066 intron CG5065 + chr2R 16617124 intron CG5065 + chr2R 16617183 intron CG5065 + chr2R_7_16615001 chr2R_16615001 RAL-837 1028 chr2R 16682069 16682108 chr2R 16682267 16682309 8 198 4.5 4.0 4.2 1.5 240 chr2R 16682069 intron CG30463 - chr2R 16682189 intron CG30463 - chr2R 16682309 intron CG30463 - chr2R_8_16680001 chr2R_16680001 RAL-837 1029 chr2R 16775635 16775675 chr2R 16775922 16775942 13 284 3.0 5.5 4.2 2.5 307 chr2R 16775635 3` UTR Arp53D + chr2R 16775788 intergenic Arp53D + chr2R 16775942 intergenic Arp53D + chr2R_13_16775001 chr2R_16775001 RAL-837 1030 chr2R 16880012 16880060 chr2R 16880109 16880157 6 96 8.0 1.5 4.8 1.0 145 chr2R 16880012 intron CG8910 - chr2R 16880084 intron CG8910 - chr2R 16880157 intron CG8910 - chr2R_6_16880001 chr2R_16880001 RAL-837 1031 chr2R 16921279 16921318 chr2R 16921376 16921390 6 93 4.5 6.0 5.2 1.0 111 chr2R 16921279 intergenic not near genes chr2R 16921334 intergenic not near genes chr2R 16921390 intergenic not near genes chr2R_6_16920001 chr2R_16920001 RAL-837 1032 chr2R 16933312 16933362 chr2R 16933431 16933464 15 118 3.0 3.0 3.0 3.8 152 chr2R 16933312 intron Pkc53E + chr2R 16933388 intron Pkc53E + chr2R 16933464 intron Pkc53E + chr2R_15_16930001 chr2R_16930001 RAL-837 1033 chr2R 16962704 16962735 chr2R 16963062 16963108 13 366 1.0 3.5 2.2 4.1 404 chr2R 16962704 intergenic not near genes chr2R 16962906 intergenic not near genes chr2R 16963108 intergenic not near genes chr2R_13_16960001 chr2R_16960001 RAL-837 1034 chr2R 17087455 17087497 chr2R 17087553 17087590 8 87 2.0 2.5 2.2 2.5 135 chr2R 17087455 5` UTR CG30460 - chr2R 17087522 5` UTR CG30460 - chr2R 17087590 5` UTR CG30460 - chr2R_8_17085001 chr2R_17085001 RAL-837 1035 chr2R 17176352 17176383 chr2R 17182552 17182579 diver 7 6205 1.0 4.5 2.8 1.8 6227 chr2R 17176352 intergenic not near genes chr2R 17179466 intergenic not near genes chr2R 17182579 intergenic not near genes chr2R_7_17175001 chr2R_17175001 RAL-837 1036 chr2R 17236516 17236531 chr2R 17241733 17241755 copia 7 5222 5.0 8.0 6.5 0.9 5239 chr2R 17236516 intron mbl + chr2R 17239136 intron mbl + chr2R 17241755 intron mbl + chr2R_7_17235001 chr2R_17235001 RAL-837 1037 chr2R 17245260 17245302 chr2R 17245359 17245361 5 90 2.5 2.5 2.5 1.4 101 chr2R 17245260 intron mbl + chr2R 17245310 intron mbl + chr2R 17245361 intron mbl + chr2R_5_17245001 chr2R_17245001 RAL-837 1038 chr2R 17247962 17248000 chr2R 17248094 17248137 9 135 2.5 4.0 3.2 2.1 175 chr2R 17247962 intron mbl + chr2R 17248050 intron mbl + chr2R 17248137 intron mbl + chr2R_9_17245001 chr2R_17245001 RAL-837 1039 chr2R 17259124 17259158 chr2R 17259251 17259265 5 130 4.5 0.5 2.5 1.4 141 chr2R 17259124 intron mbl + chr2R 17259194 intron mbl + chr2R 17259265 intron mbl + chr2R_5_17255001 chr2R_17255001 RAL-837 1040 chr2R 17261496 17261515 chr2R 17261603 17261622 6 107 2.5 5.0 3.8 1.2 126 chr2R 17261496 intron mbl + chr2R 17261559 intron mbl + chr2R 17261622 intron mbl + chr2R_6_17260001 chr2R_17260001 RAL-837 1041 chr2R 17419917 17419962 chr2R 17420018 17420060 5 99 2.0 2.0 2.0 1.7 143 chr2R 17419917 5` UTR cnk - chr2R 17419988 5` UTR cnk - chr2R 17420060 intergenic cnk -,l(2)k01209 + chr2R_5_17415001 chr2R_17415001 RAL-837 1042 chr2R 17458985 17459035 chr2R 17459090 17459140 12 105 4.0 6.5 5.2 1.9 155 chr2R 17458985 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459140 intron CG14478 + chr2R_12_17455001 chr2R_17455001 RAL-837 1043 chr2R 17478826 17478853 chr2R 17478924 17478951 5 98 3.5 3.0 3.2 1.2 125 chr2R 17478826 3` UTR,intron CG43110 -,veil + chr2R 17478888 3` UTR,intron CG43110 -,veil + chr2R 17478951 3` UTR,intron CG43110 -,veil + chr2R_5_17475001 chr2R_17475001 RAL-837 1044 chr2R 17485897 17485950 chr2R 17490687 17490740 F-element 21 4785 3.0 3.5 3.2 5.0 4843 chr2R 17485897 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488318 intron NT5E-2 + chr2R 17490740 intron NT5E-2 + chr2R_21_17485001 chr2R_17485001 RAL-837 1045 chr2R 17709674 17709964 chr2R 17709780 17710075 5 107 8.5 4.0 6.2 0.7 401 chr2R 17709674 intron CG6424 - chr2R 17709874 intron CG6424 - chr2R 17710075 intron CG6424 - chr2R_5_17705001 chr2R_17705001 RAL-837 1046 chr2R 17709981 17710004 chr2R 17710080 17710115 5 107 6.0 3.0 4.5 0.9 134 chr2R 17709981 intron CG6424 - chr2R 17710048 intron CG6424 - chr2R 17710115 intron CG6424 - chr2R_5_17710001 chr2R_17710001 RAL-837 1047 chr2R 17782342 17782394 chr2R 17783565 17783605 pogo 9 1219 2.0 1.0 1.5 3.6 1263 chr2R 17782342 intergenic CG33981 -,fab1 - chr2R 17782974 intergenic not near genes chr2R 17783605 intergenic mir-31a - chr2R_9_17780001 chr2R_17780001 RAL-837 1048 chr2R 17784007 17784056 chr2R 17784266 17784282 pogo 9 253 2.0 3.0 2.5 2.6 275 chr2R 17784007 intergenic mir-31a - chr2R 17784144 intergenic mir-31a - chr2R 17784282 intergenic mir-31a - chr2R_9_17780001 chr2R_17780001 RAL-837 1049 chr2R 17885095 17885142 chr2R 17885205 17885254 7 110 2.0 0.5 1.2 3.2 159 chr2R 17885095 intron Elk + chr2R 17885174 intron Elk + chr2R 17885254 intron Elk + chr2R_7_17885001 chr2R_17885001 RAL-837 1050 chr2R 17898866 17898878 chr2R 17898946 17898985 4 102 6.0 2.0 4.0 0.8 119 chr2R 17898866 intron Elk + chr2R 17898926 intron Elk + chr2R 17898985 intron Elk + chr2R_4_17895001 chr2R_17895001 RAL-837 1051 chr2R 17913497 17913511 chr2R 17913590 17913594 5 105 2.5 1.5 2.0 1.7 97 chr2R 17913497 intron Elk + chr2R 17913546 intron Elk + chr2R 17913594 intron Elk + chr2R_5_17910001 chr2R_17910001 RAL-837 1052 chr2R 17921441 17921450 chr2R 17921542 17921551 4 100 3.0 8.0 5.5 0.6 110 chr2R 17921441 intron Elk + chr2R 17921496 intron Elk + chr2R 17921551 intron Elk + chr2R_4_17920001 chr2R_17920001 RAL-837 1053 chr2R 17950144 17950186 chr2R 17950250 17950252 6 90 3.5 5.0 4.2 1.2 108 chr2R 17950144 intergenic not near genes chr2R 17950198 intergenic not near genes chr2R 17950252 intergenic not near genes chr2R_6_17950001 chr2R_17950001 RAL-837 1054 chr2R 18040723 18040763 chr2R 18040835 18040853 11 104 6.0 0.5 3.2 2.6 130 chr2R 18040723 intergenic not near genes chr2R 18040788 intergenic not near genes chr2R 18040853 intergenic not near genes chr2R_11_18040001 chr2R_18040001 RAL-837 1055 chr2R 18045657 18045700 chr2R 18046024 18046072 jockey 14 371 4.5 5.5 5.0 2.3 415 chr2R 18045657 intergenic not near genes chr2R 18045864 intergenic not near genes chr2R 18046072 intergenic CG5767 - chr2R_14_18045001 chr2R_18045001 RAL-837 1056 chr2R 18074590 18074623 chr2R 18074686 18074719 9 94 2.5 3.0 2.8 2.4 129 chr2R 18074590 intron CG34386 + chr2R 18074654 intron CG34386 + chr2R 18074719 intron CG34386 + chr2R_9_18070001 chr2R_18070001 RAL-837 1057 chr2R 18111689 18111714 chr2R 18115577 18115602 F-element 6 3885 2.5 5.0 3.8 1.2 3913 chr2R 18111689 intergenic not near genes chr2R 18113646 intergenic not near genes chr2R 18115602 intergenic not near genes chr2R_6_18110001 chr2R_18110001 RAL-837 1058 chr2R 18224603 18224627 chr2R 18224687 18224712 6 92 1.5 8.5 5.0 1.0 109 chr2R 18224603 intergenic not near genes chr2R 18224658 intergenic not near genes chr2R 18224712 intergenic not near genes chr2R_6_18220001 chr2R_18220001 RAL-837 1059 chr2R 18260860 18260881 chr2R 18261025 18261046 10 163 1.5 2.5 2.0 3.3 186 chr2R 18260860 intergenic not near genes chr2R 18260953 intergenic not near genes chr2R 18261046 intergenic not near genes chr2R_10_18260001 chr2R_18260001 RAL-837 1060 chr2R 18289412 18289459 chr2R 18289534 18289571 5 113 3.5 3.0 3.2 1.2 159 chr2R 18289412 intron,intron sbb -,CG14502 + chr2R 18289492 intron,intron sbb -,CG14502 + chr2R 18289571 exon,intron sbb -,CG14502 + chr2R_5_18285001 chr2R_18285001 RAL-837 1061 chr2R 18328724 18328775 chr2R 18328826 18328877 9 95 1.0 3.0 2.0 3.0 153 chr2R 18328724 intron sbb - chr2R 18328800 intron sbb - chr2R 18328877 intron sbb - chr2R_9_18325001 chr2R_18325001 RAL-837 1062 chr2R 18390848 18390906 chr2R 18390955 18390998 11 96 1.0 5.5 3.2 2.6 150 chr2R 18390848 intergenic CG15068 - chr2R 18390923 intergenic CG15068 - chr2R 18390998 intergenic CG15068 - chr2R_11_18390001 chr2R_18390001 RAL-837 1063 chr2R 18398154 18398175 chr2R 18398268 18398285 4 112 9.0 3.5 6.2 0.6 131 chr2R 18398154 intron GstE10 - chr2R 18398220 intron GstE10 - chr2R 18398285 intron GstE10 - chr2R_4_18395001 chr2R_18395001 RAL-837 1064 chr2R 18405729 18405788 chr2R 18405830 18405878 8 96 2.5 0.5 1.5 3.2 149 chr2R 18405729 intergenic GstE6 +,GstE5 + chr2R 18405804 intergenic GstE6 +,GstE5 + chr2R 18405878 intergenic GstE6 + chr2R_8_18405001 chr2R_18405001 RAL-837 1065 chr2R 18408266 18408309 chr2R 18408407 18408410 9 136 5.0 6.5 5.8 1.3 144 chr2R 18408266 exon GstE8 + chr2R 18408338 exon GstE8 + chr2R 18408410 exon GstE8 + chr2R_9_18405001 chr2R_18405001 RAL-837 1066 chr2R 18487823 18487847 chr2R 18495294 18495325 blood 4 7476 1.5 4.5 3.0 1.0 7502 chr2R 18487823 intron CG30116 - chr2R 18491574 intron CG30116 - chr2R 18495325 intron CG30116 - chr2R_4_18490001 chr2R_18490001 RAL-837 1067 chr2R 18528173 18528213 chr2R 18528278 18528283 8 98 4.5 2.0 3.2 1.9 110 chr2R 18528173 intron CG10924 + chr2R 18528228 intron CG10924 + chr2R 18528283 intron CG10924 + chr2R_8_18525001 chr2R_18525001 RAL-837 1068 chr2R 18575811 18575831 chr2R 18581983 18582039 3S18 7 6189 4.0 2.5 3.2 1.7 6228 chr2R 18575811 intron GEFmeso - chr2R 18578925 intron GEFmeso - chr2R 18582039 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-837 1069 chr2R 18590848 18590890 chr2R 18600020 18600062 roo 8 9170 6.5 4.0 5.2 1.3 9214 chr2R 18590848 intron GEFmeso - chr2R 18595455 intron GEFmeso - chr2R 18600062 intron GEFmeso - chr2R_8_18595001 chr2R_18595001 RAL-837 1070 chr2R 18646393 18646435 chr2R 18646558 18646586 11 162 5.0 5.0 5.0 1.8 193 chr2R 18646393 intron SP2637 - chr2R 18646490 intron SP2637 - chr2R 18646586 intron SP2637 - chr2R_11_18645001 chr2R_18645001 RAL-837 1071 chr2R 18692882 18692912 chr2R 18692989 18693014 13 103 7.5 2.0 4.8 2.2 132 chr2R 18692882 intron Sik3 + chr2R 18692948 intron Sik3 + chr2R 18693014 intron Sik3 + chr2R_13_18690001 chr2R_18690001 RAL-837 1072 chr2R 18835871 18835907 chr2R 18835973 18835990 8 97 6.5 0.0 3.2 1.9 119 chr2R 18835871 intron CG15083 + chr2R 18835930 intron CG15083 + chr2R 18835990 intron CG15083 + chr2R_8_18835001 chr2R_18835001 RAL-837 1073 chr2R 18847589 18847639 chr2R 18847692 18847692 11 92 4.0 2.0 3.0 2.8 103 chr2R 18847589 exon CG15100 - chr2R 18847640 exon CG15100 - chr2R 18847692 exon CG15100 - chr2R_11_18845001 chr2R_18845001 RAL-837 1074 chr2R 18862289 18862406 chr2R 18862396 18862511 7 115 0.0 0.0 0.0 7.0 222 chr2R 18862289 intergenic Jheh3 - chr2R 18862400 intergenic Jheh3 -,CG43069 + chr2R 18862511 intergenic CG43069 +,Jheh3 - chr2R_7_18860001 chr2R_18860001 RAL-837 1075 chr2R 18871632 18871679 chr2R 18871737 18871777 7 104 3.5 4.5 4.0 1.4 145 chr2R 18871632 intergenic not near genes chr2R 18871704 intergenic not near genes chr2R 18871777 intergenic not near genes chr2R_7_18870001 chr2R_18870001 RAL-837 1076 chr2R 18926513 18926529 chr2R 18926608 18926631 6 104 2.5 3.0 2.8 1.6 118 chr2R 18926513 intron sano + chr2R 18926572 intron sano + chr2R 18926631 intron sano + chr2R_6_18925001 chr2R_18925001 RAL-837 1077 chr2R 18948031 18948077 chr2R 18948137 18948183 5 106 1.5 0.0 0.8 2.8 152 chr2R 18948031 intron sano + chr2R 18948107 intron sano + chr2R 18948183 intron sano + chr2R_5_18945001 chr2R_18945001 RAL-837 1078 chr2R 18953144 18953164 chr2R 18953251 18953271 7 104 4.5 7.5 6.0 1.0 127 chr2R 18953144 intron sano + chr2R 18953208 intron sano + chr2R 18953271 intron sano + chr2R_7_18950001 chr2R_18950001 RAL-837 1079 chr2R 18953173 18953192 chr2R 18953244 18953299 6 88 1.0 6.5 3.8 1.2 126 chr2R 18953173 intron sano + chr2R 18953236 intron sano + chr2R 18953299 intron sano + chr2R_6_18950001 chr2R_18950001 RAL-837 1080 chr2R 18964898 18964952 chr2R 18964994 18965048 10 94 4.0 4.0 4.0 2.0 150 chr2R 18964898 intergenic not near genes chr2R 18964973 intergenic not near genes chr2R 18965048 intergenic not near genes chr2R_10_18960001 chr2R_18960001 RAL-837 1081 chr2R 18984457 18984480 chr2R 18984735 18984759 4 276 6.0 4.5 5.2 0.6 302 chr2R 18984457 intergenic not near genes chr2R 18984608 intergenic not near genes chr2R 18984759 intergenic not near genes chr2R_4_18980001 chr2R_18980001 RAL-837 1082 chr2R 19067728 19067750 chr2R 19067809 19067846 7 92 2.5 2.0 2.2 2.2 118 chr2R 19067728 intron 5-HT1A + chr2R 19067787 intron 5-HT1A + chr2R 19067846 intron 5-HT1A + chr2R_7_19065001 chr2R_19065001 RAL-837 1083 chr2R 19385098 19385135 chr2R 19385661 19385698 9 561 0.5 5.0 2.8 2.4 600 chr2R 19385098 intergenic CG10073 + chr2R 19385398 intergenic CG10073 + chr2R 19385698 intergenic CG10081 + chr2R_9_19385001 chr2R_19385001 RAL-837 1084 chr2R 19555564 19555610 chr2R 19555667 19555676 6 87 3.0 1.5 2.2 1.9 112 chr2R 19555564 intron sm - chr2R 19555620 intron sm - chr2R 19555676 intron sm - chr2R_6_19555001 chr2R_19555001 RAL-837 1085 chr2R 19572176 19572201 chr2R 19572279 19572304 7 99 6.0 5.5 5.8 1.0 128 chr2R 19572176 intron sm - chr2R 19572240 intron sm - chr2R 19572304 intron sm - chr2R_7_19570001 chr2R_19570001 RAL-837 1086 chr2R 19597837 19597846 chr2R 19597932 19597933 4 104 4.0 5.0 4.5 0.7 96 chr2R 19597837 intron sm - chr2R 19597885 intron sm - chr2R 19597933 intron sm - chr2R_4_19595001 chr2R_19595001 RAL-837 1087 chr2R 19603958 19604005 chr2R 19604067 19604102 6 104 0.5 4.0 2.2 1.9 144 chr2R 19603958 intron sm - chr2R 19604030 intron sm - chr2R 19604102 intron sm - chr2R_6_19600001 chr2R_19600001 RAL-837 1088 chr2R 19639572 19639597 chr2R 19639663 19639693 7 94 3.0 4.0 3.5 1.6 121 chr2R 19639572 intergenic not near genes chr2R 19639632 intergenic not near genes chr2R 19639693 intergenic not near genes chr2R_7_19635001 chr2R_19635001 RAL-837 1089 chr2R 19699881 19699917 chr2R 19699986 19700023 6 102 3.0 3.5 3.2 1.4 142 chr2R 19699881 intergenic Obp56c - chr2R 19699952 intergenic Obp56c - chr2R 19700023 3` UTR Obp56c - chr2R_6_19695001 chr2R_19695001 RAL-837 1090 chr2R 19702703 19702728 chr2R 19702798 19702825 4 94 5.5 5.5 5.5 0.6 122 chr2R 19702703 intergenic Obp56d - chr2R 19702764 intergenic Obp56d - chr2R 19702825 intergenic Obp56d - chr2R_4_19700001 chr2R_19700001 RAL-837 1091 chr2R 19773989 19774043 chr2R 19774122 19774169 10 129 4.5 7.0 5.8 1.5 180 chr2R 19773989 intergenic not near genes chr2R 19774079 intergenic not near genes chr2R 19774169 intergenic not near genes chr2R_10_19770001 chr2R_19770001 RAL-837 1092 chr2R 19776582 19776627 chr2R 19779925 19779949 jockey 9 3341 3.5 6.0 4.8 1.6 3367 chr2R 19776582 intergenic not near genes chr2R 19778266 intergenic not near genes chr2R 19779949 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-837 1093 chr2R 19914827 19914875 chr2R 19922259 19922306 mdg1 4 7430 5.0 2.0 3.5 0.9 7479 chr2R 19914827 intergenic not near genes chr2R 19918566 intergenic not near genes chr2R 19922306 intergenic not near genes chr2R_4_19915001 chr2R_19915001 RAL-837 1094 chr2R 19957445 19957464 chr2R 19962635 19962644 copia 6 5207 4.5 3.0 3.8 1.2 5199 chr2R 19957445 intergenic CG44623 + chr2R 19960044 intergenic not near genes chr2R 19962644 intergenic not near genes chr2R_6_19960001 chr2R_19960001 RAL-837 1095 chr2R 19981226 19981272 chr2R 19982018 19982032 9 781 2.0 2.0 2.0 3.0 806 chr2R 19981226 intron CG8654 + chr2R 19981629 intron CG8654 + chr2R 19982032 intron CG8654 + chr2R_9_19980001 chr2R_19980001 RAL-837 1096 chr2R 20008184 20008207 chr2R 20008270 20008297 9 98 3.5 2.0 2.8 2.4 113 chr2R 20008184 intergenic not near genes chr2R 20008240 intergenic not near genes chr2R 20008297 intergenic not near genes chr2R_9_20005001 chr2R_20005001 RAL-837 1097 chr2R 20162692 20162709 chr2R 20162809 20162846 4 132 3.0 3.0 3.0 1.0 154 chr2R 20162692 intergenic not near genes chr2R 20162769 intergenic not near genes chr2R 20162846 intergenic not near genes chr2R_4_20160001 chr2R_20160001 RAL-837 1098 chr2R 20218765 20218795 chr2R 20218856 20218898 5 97 2.0 1.5 1.8 1.8 133 chr2R 20218765 intergenic not near genes chr2R 20218832 intergenic not near genes chr2R 20218898 intergenic not near genes chr2R_5_20215001 chr2R_20215001 RAL-837 1099 chr2R 20223941 20223985 chr2R 20224035 20224090 6 99 2.5 2.5 2.5 1.7 149 chr2R 20223941 intergenic not near genes chr2R 20224016 intergenic not near genes chr2R 20224090 intergenic not near genes chr2R_6_20220001 chr2R_20220001 RAL-837 1100 chr2R 20338736 20338761 chr2R 20338836 20338861 10 99 3.0 0.0 1.5 4.0 125 chr2R 20338736 intergenic not near genes chr2R 20338798 intergenic not near genes chr2R 20338861 intergenic not near genes chr2R_10_20335001 chr2R_20335001 RAL-837 1101 chr2R 20395008 20395057 chr2R 20395200 20395253 4 191 4.0 0.0 2.0 1.3 245 chr2R 20395008 intergenic not near genes chr2R 20395130 intergenic not near genes chr2R 20395253 intergenic not near genes chr2R_4_20395001 chr2R_20395001 RAL-837 1102 chr2R 20422553 20422595 chr2R 20422652 20422694 8 98 1.0 2.0 1.5 3.2 141 chr2R 20422553 intergenic not near genes chr2R 20422624 intergenic not near genes chr2R 20422694 intergenic not near genes chr2R_8_20420001 chr2R_20420001 RAL-837 1103 chr2R 20457452 20457489 chr2R 20457547 20457561 6 85 4.0 2.0 3.0 1.5 109 chr2R 20457452 intron CG12484 + chr2R 20457506 intron CG12484 + chr2R 20457561 intron CG12484 + chr2R_6_20455001 chr2R_20455001 RAL-837 1104 chr2R 20523017 20523068 chr2R 20523148 20523199 8 121 0.5 1.5 1.0 4.0 182 chr2R 20523017 intergenic not near genes chr2R 20523108 intergenic not near genes chr2R 20523199 intergenic not near genes chr2R_8_20520001 chr2R_20520001 RAL-837 1105 chr2R 20528743 20528778 chr2R 20528927 20528967 8 178 1.0 2.5 1.8 2.9 224 chr2R 20528743 exon CG30151 - chr2R 20528855 exon CG30151 - chr2R 20528967 exon CG30151 - chr2R_8_20525001 chr2R_20525001 RAL-837 1106 chr2R 20541976 20542017 chr2R 20542064 20542114 19 92 2.0 3.0 2.5 5.4 138 chr2R 20541976 intergenic not near genes chr2R 20542045 intergenic not near genes chr2R 20542114 intergenic not near genes chr2R_19_20540001 chr2R_20540001 RAL-837 1107 chr2R 20702649 20702703 chr2R 20702745 20702799 16 92 3.0 3.0 3.0 4.0 150 chr2R 20702649 intron dpr + chr2R 20702724 intron dpr + chr2R 20702799 intron dpr + chr2R_16_20700001 chr2R_20700001 RAL-837 1108 chr2R 20739438 20739457 chr2R 20744226 20744245 F-element 9 4787 3.5 8.0 5.8 1.3 4807 chr2R 20739438 intron dpr + chr2R 20741842 intron dpr + chr2R 20744245 intron dpr + chr2R_9_20740001 chr2R_20740001 RAL-837 1109 chr2R 20772258 20772306 chr2R 20772361 20772409 11 99 3.5 1.0 2.2 3.4 151 chr2R 20772258 intergenic not near genes chr2R 20772334 intergenic not near genes chr2R 20772409 intergenic not near genes chr2R_11_20770001 chr2R_20770001 RAL-837 1110 chr2R 20783297 20783332 chr2R 20788089 20788093 F-element 8 4780 3.5 6.0 4.8 1.4 4796 chr2R 20783297 intergenic not near genes chr2R 20785695 intergenic not near genes chr2R 20788093 intergenic CG43666 - chr2R_8_20785001 chr2R_20785001 RAL-837 1111 chr2R 20863102 20863139 chr2R 20863208 20863245 6 105 3.0 4.0 3.5 1.3 143 chr2R 20863102 intergenic not near genes chr2R 20863174 intergenic not near genes chr2R 20863245 intergenic not near genes chr2R_6_20860001 chr2R_20860001 RAL-837 1112 chr2R 20875229 20875255 chr2R 20875341 20875367 5 112 7.0 2.5 4.8 0.9 138 chr2R 20875229 intron Ipk1 + chr2R 20875298 exon Ipk1 + chr2R 20875367 exon Ipk1 + chr2R_5_20875001 chr2R_20875001 RAL-837 1113 chr2R 20942360 20942373 chr2R 20942478 20942491 5 118 1.0 1.5 1.2 2.3 131 chr2R 20942360 intergenic not near genes chr2R 20942426 intergenic not near genes chr2R 20942491 intergenic not near genes chr2R_5_20940001 chr2R_20940001 RAL-837 1114 chr2R 21043633 21043681 chr2R 21043738 21043804 7 105 2.5 0.0 1.2 3.2 171 chr2R 21043633 intergenic not near genes chr2R 21043718 intergenic not near genes chr2R 21043804 intergenic not near genes chr2R_7_21040001 chr2R_21040001 RAL-837 1115 chr2R 21045642 21045696 chr2R 21045960 21046014 20 316 1.5 2.0 1.8 7.1 372 chr2R 21045642 intergenic not near genes chr2R 21045828 intergenic not near genes chr2R 21046014 intergenic not near genes chr2R_20_21045001 chr2R_21045001 RAL-837 1116 chr2R 21094368 21094409 chr2R 21094488 21094529 14 117 3.0 4.5 3.8 2.9 161 chr2R 21094368 intron CG34396 + chr2R 21094448 intron CG34396 + chr2R 21094529 intron CG34396 + chr2R_14_21090001 chr2R_21090001 RAL-837 1117 chr2R 21151113 21151145 chr2R 21153751 21153798 opus 12 2650 7.5 4.0 5.8 1.8 2685 chr2R 21151113 intron CG30389 - chr2R 21152456 intron CG30389 - chr2R 21153798 intron CG30389 - chr2R_12_21150001 chr2R_21150001 RAL-837 1118 chr2R 21220991 21221029 chr2R 21221103 21221141 7 112 4.0 2.5 3.2 1.7 150 chr2R 21220991 exon ASPP - chr2R 21221066 exon ASPP - chr2R 21221141 exon ASPP - chr2R_7_21220001 chr2R_21220001 RAL-837 1119 chr2R 21246191 21246219 chr2R 21246301 21246321 9 112 1.5 2.0 1.8 3.2 130 chr2R 21246191 intron ASPP - chr2R 21246256 intron ASPP - chr2R 21246321 intron ASPP - chr2R_9_21245001 chr2R_21245001 RAL-837 1120 chr2R 21417259 21417277 chr2R 21417380 21417385 5 118 3.0 1.0 2.0 1.7 126 chr2R 21417259 intron Sdc - chr2R 21417322 intron Sdc - chr2R 21417385 intron Sdc - chr2R_5_21415001 chr2R_21415001 RAL-837 1121 chr2R 21522076 21522084 chr2R 21522202 21522210 4 139 2.0 2.5 2.2 1.2 134 chr2R 21522076 intergenic CG30289 -,Egfr + chr2R 21522143 intergenic Egfr +,CG30289 - chr2R 21522210 intergenic Egfr +,CG30289 - chr2R_4_21520001 chr2R_21520001 RAL-837 1122 chr2R 21546765 21546820 chr2R 21546866 21546886 9 84 2.0 2.0 2.0 3.0 121 chr2R 21546765 intron Egfr + chr2R 21546826 intron Egfr + chr2R 21546886 intron Egfr + chr2R_9_21545001 chr2R_21545001 RAL-837 1123 chr2R 21592836 21592855 chr2R 21592939 21592948 4 100 3.5 4.0 3.8 0.8 112 chr2R 21592836 intergenic not near genes chr2R 21592892 intergenic not near genes chr2R 21592948 intergenic not near genes chr2R_4_21590001 chr2R_21590001 RAL-837 1124 chr2R 21721558 21721604 chr2R 21721666 21721712 7 97 1.5 4.0 2.8 1.8 154 chr2R 21721558 intron LBR + chr2R 21721635 intron LBR + chr2R 21721712 intron LBR + chr2R_7_21720001 chr2R_21720001 RAL-837 1125 chr2R 21725212 21725217 chr2R 21725309 21725310 4 96 0.0 4.0 2.0 1.3 98 chr2R 21725212 intergenic not near genes chr2R 21725261 intergenic not near genes chr2R 21725310 intergenic not near genes chr2R_4_21725001 chr2R_21725001 RAL-837 1126 chr2R 21730247 21730291 chr2R 21730461 21730505 7 213 3.0 5.5 4.2 1.3 258 chr2R 21730247 intergenic not near genes chr2R 21730376 intergenic not near genes chr2R 21730505 intergenic not near genes chr2R_7_21730001 chr2R_21730001 RAL-837 1127 chr2R 21738297 21738304 chr2R 21747441 21747452 roo 9 9154 3.0 3.5 3.2 2.1 9155 chr2R 21738297 intergenic not near genes chr2R 21742874 intergenic not near genes chr2R 21747452 intergenic not near genes chr2R_9_21740001 chr2R_21740001 RAL-837 1128 chr2R 21753065 21753084 chr2R 21753570 21753589 roo 9 503 10.5 7.5 9.0 0.9 524 chr2R 21753065 intergenic not near genes chr2R 21753327 intergenic not near genes chr2R 21753589 intergenic not near genes chr2R_9_21750001 chr2R_21750001 RAL-837 1129 chr2R 21753087 21753112 chr2R 21753567 21753617 roo 11 494 5.0 7.5 6.2 1.5 530 chr2R 21753087 intergenic not near genes chr2R 21753352 intergenic not near genes chr2R 21753617 intergenic not near genes chr2R_11_21750001 chr2R_21750001 RAL-837 1130 chr2R 21806753 21806777 chr2R 21806858 21806897 7 118 5.5 7.5 6.5 0.9 144 chr2R 21806753 intergenic not near genes chr2R 21806825 intergenic not near genes chr2R 21806897 intergenic not near genes chr2R_7_21805001 chr2R_21805001 RAL-837 1131 chr2R 21809506 21809558 chr2R 21817766 21817810 roo 17 8250 6.5 4.5 5.5 2.6 8304 chr2R 21809506 intergenic not near genes chr2R 21813658 intergenic not near genes chr2R 21817810 intergenic not near genes chr2R_17_21810001 chr2R_21810001 RAL-837 1132 chr2R 21857333 21857368 chr2R 21857444 21857454 5 102 4.0 3.5 3.8 1.0 121 chr2R 21857333 intergenic not near genes chr2R 21857394 intergenic not near genes chr2R 21857454 intergenic not near genes chr2R_5_21855001 chr2R_21855001 RAL-837 1133 chr2R 21906251 21906302 chr2R 21906372 21906378 11 115 0.5 3.0 1.8 3.9 127 chr2R 21906251 intron Fili + chr2R 21906314 intron Fili + chr2R 21906378 intron Fili + chr2R_11_21905001 chr2R_21905001 RAL-837 1134 chr2R 21919859 21919897 chr2R 21919967 21919973 15 101 2.0 5.5 3.8 3.1 114 chr2R 21919859 intron Fili + chr2R 21919916 intron Fili + chr2R 21919973 intron Fili + chr2R_15_21915001 chr2R_21915001 RAL-837 1135 chr2R 22009764 22009804 chr2R 22009860 22009899 8 90 2.5 9.5 6.0 1.1 135 chr2R 22009764 intron CG34370 - chr2R 22009832 intron CG34370 - chr2R 22009899 intron CG34370 - chr2R_8_22005001 chr2R_22005001 RAL-837 1136 chr2R 22012984 22013009 chr2R 22013092 22013124 7 114 2.0 3.0 2.5 2.0 140 chr2R 22012984 intron CG34370 - chr2R 22013054 intron CG34370 - chr2R 22013124 intron CG34370 - chr2R_7_22010001 chr2R_22010001 RAL-837 1137 chr2R 22029459 22029505 chr2R 22029617 22029663 13 157 3.0 1.0 2.0 4.3 204 chr2R 22029459 intron CG34370 - chr2R 22029561 intron CG34370 - chr2R 22029663 intron CG34370 - chr2R_13_22025001 chr2R_22025001 RAL-837 1138 chr2R 22035521 22035573 chr2R 22035628 22035654 13 100 3.0 2.5 2.8 3.4 133 chr2R 22035521 intron,exon CG34370 -,CG9308 + chr2R 22035588 intron,3` UTR CG34370 -,CG9308 + chr2R 22035654 intron,3` UTR CG34370 -,CG9308 + chr2R_13_22035001 chr2R_22035001 RAL-837 1139 chr2R 22040139 22040175 chr2R 22040240 22040276 7 98 4.5 4.0 4.2 1.3 137 chr2R 22040139 intergenic not near genes chr2R 22040208 intergenic not near genes chr2R 22040276 intergenic not near genes chr2R_7_22040001 chr2R_22040001 RAL-837 1140 chr2R 22072682 22072715 chr2R 22072769 22072810 6 97 1.0 4.5 2.8 1.6 128 chr2R 22072682 intron CG11474 - chr2R 22072746 intron CG11474 - chr2R 22072810 exon CG11474 - chr2R_6_22070001 chr2R_22070001 RAL-837 1141 chr2R 22095943 22095990 chr2R 22096046 22096092 11 100 3.0 5.5 4.2 2.1 149 chr2R 22095943 intron CG11073 - chr2R 22096018 intron CG11073 - chr2R 22096092 intron CG11073 - chr2R_11_22095001 chr2R_22095001 RAL-837 1142 chr2R 22205857 22205876 chr2R 22205962 22205988 5 111 5.5 4.5 5.0 0.8 131 chr2R 22205857 intergenic CG3290 -,CG3292 - chr2R 22205922 intergenic CG3290 -,CG3292 - chr2R 22205988 intergenic CG3290 -,CG3292 - chr2R_5_22205001 chr2R_22205001 RAL-837 1143 chr2R 22290073 22290084 chr2R 22290177 22290188 8 104 6.5 4.0 5.2 1.3 115 chr2R 22290073 intergenic not near genes chr2R 22290130 intergenic not near genes chr2R 22290188 intergenic not near genes chr2R_8_22290001 chr2R_22290001 RAL-837 1144 chr2R 22349686 22349709 chr2R 22351490 22351493 jockey 4 1796 3.5 5.5 4.5 0.7 1807 chr2R 22349686 intron Liprin-gamma - chr2R 22350590 intron Liprin-gamma - chr2R 22351493 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 RAL-837 1145 chr2R 22360366 22360378 chr2R 22360819 22360831 jockey 5 452 13.0 4.5 8.8 0.5 465 chr2R 22360366 intron Liprin-gamma - chr2R 22360598 intron Liprin-gamma - chr2R 22360831 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-837 1146 chr2R 22374620 22374638 chr2R 22374727 22374745 4 107 5.5 3.5 4.5 0.7 125 chr2R 22374620 3` UTR CR44759 - chr2R 22374682 3` UTR CR44759 - chr2R 22374745 3` UTR CR44759 - chr2R_4_22370001 chr2R_22370001 RAL-837 1147 chr2R 22503866 22503890 chr2R 22503965 22503984 9 109 0.5 1.0 0.8 5.0 118 chr2R 22503866 intron px - chr2R 22503925 intron px - chr2R 22503984 intron px - chr2R_9_22500001 chr2R_22500001 RAL-837 1148 chr2R 22525736 22525785 chr2R 22529311 22529330 jockey 8 3565 0.5 6.5 3.5 1.8 3594 chr2R 22525736 intron px - chr2R 22527533 intron px - chr2R 22529330 intron px - chr2R_8_22525001 chr2R_22525001 RAL-837 1149 chr2R 22575670 22575684 chr2R 22575738 22575744 8 79 2.0 1.0 1.5 3.2 74 chr2R 22575670 intron dnr1 - chr2R 22575707 intron dnr1 - chr2R 22575744 intron dnr1 - chr2R_8_22575001 chr2R_22575001 RAL-837 1150 chr2R 22646451 22646466 chr2R 22646563 22646578 4 112 6.5 0.0 3.2 1.0 127 chr2R 22646451 intergenic CG2852 -,CG30195 - chr2R 22646514 intergenic CG30195 -,CG2852 - chr2R 22646578 intergenic CG30195 -,CG2852 - chr2R_4_22645001 chr2R_22645001 RAL-837 1151 chr2R 22756544 22756587 chr2R 22756641 22756649 13 93 6.0 7.5 6.8 1.7 105 chr2R 22756544 intron,intron CG42260 -,CR30267 + chr2R 22756596 intron,intron CG42260 -,CR30267 + chr2R 22756649 intron,intron CG42260 -,CR30267 + chr2R_13_22755001 chr2R_22755001 RAL-837 1152 chr2R 22810549 22810568 chr2R 22810685 22810689 4 128 7.0 0.0 3.5 0.9 140 chr2R 22810549 intron stl + chr2R 22810619 intron stl + chr2R 22810689 intron stl + chr2R_4_22810001 chr2R_22810001 RAL-837 1153 chr2R 22873609 22873657 chr2R 22873705 22873753 9 96 2.0 0.0 1.0 4.5 144 chr2R 22873609 exon CG13532 + chr2R 22873681 intron CG13532 + chr2R 22873753 intron CG13532 + chr2R_9_22870001 chr2R_22870001 RAL-837 1154 chr2R 22941804 22941846 chr2R 22941903 22941935 13 95 0.0 5.5 2.8 3.4 131 chr2R 22941804 intergenic CG42694 + chr2R 22941870 intergenic CG42694 + chr2R 22941935 5` UTR CG42694 + chr2R_13_22940001 chr2R_22940001 RAL-837 1155 chr2R 22997345 22997392 chr2R 22997446 22997493 7 101 5.0 6.5 5.8 1.0 148 chr2R 22997345 intron,intron twi +,CG9896 - chr2R 22997419 intron,intron twi +,CG9896 - chr2R 22997493 intron,intron twi +,CG9896 - chr2R_7_22995001 chr2R_22995001 RAL-837 1156 chr2R 23052639 23052688 chr2R 23052725 23052784 13 92 3.5 3.0 3.2 3.1 145 chr2R 23052639 intergenic not near genes chr2R 23052712 intergenic not near genes chr2R 23052784 intergenic not near genes chr2R_13_23050001 chr2R_23050001 RAL-837 1157 chr2R 23110227 23110264 chr2R 23110323 23110370 9 92 2.5 6.0 4.2 1.7 143 chr2R 23110227 3` UTR CR44781 - chr2R 23110298 3` UTR CR44781 - chr2R 23110370 3` UTR CR44781 - chr2R_9_23110001 chr2R_23110001 RAL-837 1158 chr2R 23119588 23119626 chr2R 23119681 23119723 16 92 3.5 5.5 4.5 2.9 135 chr2R 23119588 intergenic not near genes chr2R 23119656 intergenic not near genes chr2R 23119723 intergenic not near genes chr2R_16_23115001 chr2R_23115001 RAL-837 1159 chr2R 23131324 23131369 chr2R 23131446 23131490 6 118 2.5 2.5 2.5 1.7 166 chr2R 23131324 intergenic not near genes chr2R 23131407 intergenic not near genes chr2R 23131490 intergenic not near genes chr2R_6_23130001 chr2R_23130001 RAL-837 1160 chr2R 23138426 23138476 chr2R 23138531 23138546 11 101 0.5 2.0 1.2 5.0 120 chr2R 23138426 intergenic CG30192 + chr2R 23138486 intergenic CG30192 + chr2R 23138546 intergenic CG30192 + chr2R_11_23135001 chr2R_23135001 RAL-837 1161 chr2R 23175017 23175065 chr2R 23175114 23175162 11 96 3.0 2.5 2.8 2.9 145 chr2R 23175017 intron CG34371 - chr2R 23175090 intron CG34371 - chr2R 23175162 intron CG34371 - chr2R_11_23175001 chr2R_23175001 RAL-837 1162 chr2R 23228287 23228303 chr2R 23228401 23228426 5 122 4.0 1.5 2.8 1.3 139 chr2R 23228287 intergenic not near genes chr2R 23228356 intergenic not near genes chr2R 23228426 intergenic not near genes chr2R_5_23225001 chr2R_23225001 RAL-837 1163 chr2R 23228304 23228317 chr2R 23228400 23228441 7 109 3.0 1.5 2.2 2.2 137 chr2R 23228304 intergenic not near genes chr2R 23228372 intergenic not near genes chr2R 23228441 intergenic not near genes chr2R_7_23225001 chr2R_23225001 RAL-837 1164 chr2R 23350492 23350535 chr2R 23350639 23350665 9 144 2.0 3.5 2.8 2.4 173 chr2R 23350492 intergenic not near genes chr2R 23350578 intergenic not near genes chr2R 23350665 intergenic not near genes chr2R_9_23350001 chr2R_23350001 RAL-837 1165 chr2R 23356264 23356299 chr2R 23356362 23356379 13 97 6.5 3.0 4.8 2.2 115 chr2R 23356264 3` UTR Rpi + chr2R 23356322 3` UTR Rpi + chr2R 23356379 3` UTR,3` UTR Rpi +,CG3500 - chr2R_13_23355001 chr2R_23355001 RAL-837 1166 chr2R 23421076 23421116 chr2R 23421163 23421212 16 95 3.5 3.0 3.2 3.8 136 chr2R 23421076 intergenic CG9815 - chr2R 23421144 intergenic CG9815 - chr2R 23421212 intergenic CG9815 - chr2R_16_23420001 chr2R_23420001 RAL-837 1167 chr2R 23433009 23433050 chr2R 23433107 23433148 8 91 3.0 3.5 3.2 1.9 139 chr2R 23433009 intron CG9815 - chr2R 23433078 intron CG9815 - chr2R 23433148 intron CG9815 - chr2R_8_23430001 chr2R_23430001 RAL-837 1168 chr2R 23508905 23508918 chr2R 23509042 23509055 4 137 7.0 4.0 5.5 0.6 150 chr2R 23508905 intergenic not near genes chr2R 23508980 intergenic not near genes chr2R 23509055 intergenic not near genes chr2R_4_23505001 chr2R_23505001 RAL-837 1169 chr2R 23508921 23508945 chr2R 23509037 23509082 7 134 4.0 3.0 3.5 1.6 161 chr2R 23508921 intergenic not near genes chr2R 23509002 intergenic not near genes chr2R 23509082 intergenic not near genes chr2R_7_23505001 chr2R_23505001 RAL-837 1170 chr2R 23518187 23518211 chr2R 23518279 23518285 5 88 7.0 0.0 3.5 1.1 98 chr2R 23518187 intergenic not near genes chr2R 23518236 intergenic not near genes chr2R 23518285 intergenic not near genes chr2R_5_23515001 chr2R_23515001 RAL-837 1171 chr2R 23588334 23588374 chr2R 23588443 23588444 5 101 1.5 3.5 2.5 1.4 110 chr2R 23588334 intron apt + chr2R 23588389 intron apt + chr2R 23588444 intron apt + chr2R_5_23585001 chr2R_23585001 RAL-837 1172 chr2R 23607017 23607193 chr2R 23607118 23607306 24 98 5.0 4.5 4.8 4.1 289 chr2R 23607017 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607306 intron CG17664 - chr2R_24_23605001 chr2R_23605001 RAL-837 1173 chr2R 23680233 23680242 chr2R 23680332 23680341 4 98 2.5 7.0 4.8 0.7 108 chr2R 23680233 3` UTR Pde8 + chr2R 23680287 3` UTR Pde8 + chr2R 23680341 3` UTR Pde8 + chr2R_4_23680001 chr2R_23680001 RAL-837 1174 chr2R 23784450 23784507 chr2R 23784548 23784600 16 92 3.0 4.5 3.8 3.3 150 chr2R 23784450 intron CG9850 - chr2R 23784525 intron CG9850 - chr2R 23784600 intron CG9850 - chr2R_16_23780001 chr2R_23780001 RAL-837 1175 chr2R 23802275 23802304 chr2R 23802398 23802406 4 118 4.0 7.5 5.8 0.6 131 chr2R 23802275 3` UTR CG30177 + chr2R 23802340 3` UTR CG30177 + chr2R 23802406 3` UTR CG30177 + chr2R_4_23800001 chr2R_23800001 RAL-837 1176 chr2R 23914312 23914328 chr2R 23921953 23921972 412 5 7643 5.5 8.0 6.8 0.6 7660 chr2R 23914312 exon kcc + chr2R 23918142 intron kcc + chr2R 23921972 exon kcc + chr2R_5_23915001 chr2R_23915001 RAL-837 1177 chr2R 23986496 23986546 chr2R 23986596 23986646 15 92 1.0 3.5 2.2 4.7 150 chr2R 23986496 intron Phm - chr2R 23986571 intron Phm - chr2R 23986646 intron,5` UTR Phm -,CG30178 + chr2R_15_23985001 chr2R_23985001 RAL-837 1178 chr2R 24031360 24031409 chr2R 24031464 24031513 16 102 7.5 3.0 5.2 2.6 153 chr2R 24031360 5` UTR CG30172 - chr2R 24031436 intergenic CG30172 -,Chi - chr2R 24031513 intergenic Chi -,CG30172 - chr2R_16_24030001 chr2R_24030001 RAL-837 1179 chr2R 24147052 24147098 chr2R 24154649 24154696 412 9 7593 2.0 5.5 3.8 1.9 7644 chr2R 24147052 intron Dat + chr2R 24150874 intron Dat + chr2R 24154696 intron Dat + chr2R_9_24150001 chr2R_24150001 RAL-837 1180 chr2R 24177216 24177268 chr2R 24184721 24184745 412 26 7499 2.5 5.0 3.8 5.4 7529 chr2R 24177216 3` UTR Nop60B + chr2R 24180980 intron Nop60B + chr2R 24184745 3` UTR Nop60B + chr2R_26_24180001 chr2R_24180001 RAL-837 1181 chr2R 24228398 24228423 chr2R 24228477 24228512 5 92 4.5 3.5 4.0 1.0 114 chr2R 24228398 intron CG30419 - chr2R 24228455 intron CG30419 - chr2R 24228512 intron CG30419 - chr2R_5_24225001 chr2R_24225001 RAL-837 1182 chr2R 24321116 24321170 chr2R 24321234 24321287 9 113 2.5 2.0 2.2 2.8 171 chr2R 24321116 intergenic not near genes chr2R 24321202 intergenic not near genes chr2R 24321287 intergenic not near genes chr2R_9_24320001 chr2R_24320001 RAL-837 1183 chr2R 24353410 24353420 chr2R 24361792 24361802 roo 6 8382 7.5 2.0 4.8 1.0 8392 chr2R 24353410 intron,intron bs +,CR44811 - chr2R 24357606 intron,intron bs +,CR44811 - chr2R 24361802 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-837 1184 chr2R 24353422 24353460 chr2R 24361789 24361793 roo 10 8361 2.0 2.0 2.0 3.3 8371 chr2R 24353422 intron,intron bs +,CR44811 - chr2R 24357608 intron,intron bs +,CR44811 - chr2R 24361793 intron,intron bs +,CR44811 - chr2R_10_24355001 chr2R_24355001 RAL-837 1185 chr2R 24633977 24634025 chr2R 24634078 24634126 10 94 3.5 4.0 3.8 2.1 149 chr2R 24633977 intron CG13594 - chr2R 24634052 intron CG13594 - chr2R 24634126 intron CG13594 - chr2R_10_24630001 chr2R_24630001 RAL-837 1186 chr2R 24636884 24636919 chr2R 24636990 24637011 12 104 7.0 0.0 3.5 2.7 127 chr2R 24636884 intron CG13594 - chr2R 24636948 intron CG13594 - chr2R 24637011 intron CG13594 - chr2R_12_24635001 chr2R_24635001 RAL-837 1187 chr2R 24647557 24647613 chr2R 24655147 24655190 412 9 7581 0.0 4.0 2.0 3.0 7633 chr2R 24647557 intergenic not near genes chr2R 24651374 intergenic not near genes chr2R 24655190 intergenic not near genes chr2R_9_24650001 chr2R_24650001 RAL-837 1188 chr2R 24723181 24723193 chr2R 24723278 24723295 5 98 9.5 4.5 7.0 0.6 114 chr2R 24723181 intron Mid1 - chr2R 24723238 intron Mid1 - chr2R 24723295 intron Mid1 - chr2R_5_24720001 chr2R_24720001 RAL-837 1189 chr2R 24723200 24723225 chr2R 24723275 24723297 14 90 5.5 4.5 5.0 2.3 97 chr2R 24723200 intron Mid1 - chr2R 24723248 intron Mid1 - chr2R 24723297 intron Mid1 - chr2R_14_24720001 chr2R_24720001 RAL-837 1190 chr2R 24727867 24727911 chr2R 24735395 24735425 mdg1 13 7519 1.5 4.5 3.0 3.2 7558 chr2R 24727867 intron Mid1 - chr2R 24731646 intron Mid1 - chr2R 24735425 intron Mid1 - chr2R_13_24730001 chr2R_24730001 RAL-837 1191 chr2R 24763598 24763643 chr2R 24765591 24765639 G2 6 1983 2.0 4.0 3.0 1.5 2041 chr2R 24763598 exon CG3894 + chr2R 24764618 intron CG3894 + chr2R 24765639 exon CG3894 + chr2R_6_24760001 chr2R_24760001 RAL-837 1192 chr2R 24884031 24884077 chr2R 24884132 24884179 15 101 3.5 3.5 3.5 3.3 148 chr2R 24884031 intron NKAIN + chr2R 24884105 intron NKAIN + chr2R 24884179 intron NKAIN + chr2R_15_24880001 chr2R_24880001 RAL-837 1193 chr2R 24927823 24927876 chr2R 24927926 24927952 12 99 3.0 4.5 3.8 2.5 129 chr2R 24927823 intron pain - chr2R 24927888 intron pain - chr2R 24927952 intron pain - chr2R_12_24925001 chr2R_24925001 RAL-837 1194 chr2R 25022639 25022673 chr2R 25022728 25022752 8 92 6.0 6.5 6.2 1.1 113 chr2R 25022639 intron uzip + chr2R 25022696 intron uzip + chr2R 25022752 intron uzip + chr2R_8_25020001 chr2R_25020001 RAL-837 1195 chr2R 25097863 25097885 chr2R 25097956 25097958 10 106 3.5 6.0 4.8 1.7 95 chr2R 25097863 intron lov - chr2R 25097910 intron lov - chr2R 25097958 intron lov - chr2R_10_25095001 chr2R_25095001 RAL-837 1196 chr2R 25141637 25141680 chr2R 25159347 25159390 roo 11 17706 3.5 4.5 4.0 2.2 17753 chr2R 25141637 intergenic not near genes chr2R 25150514 intergenic not near genes chr2R 25159390 intergenic not near genes chr2R_11_25150001 chr2R_25150001 RAL-837 1197 chr2R 25193323 25193367 chr2R 25193485 25193531 10 162 2.5 1.0 1.8 3.6 208 chr2R 25193323 intron CG9380 - chr2R 25193427 intron CG9380 - chr2R 25193531 intron CG9380 - chr2R_10_25190001 chr2R_25190001 RAL-837 1198 chr2R 25234749 25234797 chr2R 25234849 25234897 14 96 0.5 4.5 2.5 4.0 148 chr2R 25234749 intron CG9380 - chr2R 25234823 intron CG9380 - chr2R 25234897 intron CG9380 - chr2R_14_25230001 chr2R_25230001 RAL-837 1199 chr2R 25253434 25253477 chr2R 25253519 25253574 6 92 5.0 4.5 4.8 1.0 140 chr2R 25253434 intron,intron CG9380 -,CG30428 + chr2R 25253504 intron,intron CG9380 -,CG30428 + chr2R 25253574 intron,intron CG9380 -,CG30428 + chr2R_6_25250001 chr2R_25250001 RAL-837 1200 chr3L 68964 68992 chr3L 69071 69099 5 105 6.0 2.5 4.2 1.0 135 chr3L 68964 3` UTR Lsp1gamma + chr3L 69032 intergenic Lsp1gamma +,CR44510 + chr3L 69099 intergenic CR44510 +,Lsp1gamma + chr3L_5_65001 chr3L_65001 RAL-837 1201 chr3L 68998 69016 chr3L 69070 69100 7 94 3.0 2.0 2.5 2.0 102 chr3L 68998 intergenic Lsp1gamma +,CR44510 + chr3L 69049 intergenic Lsp1gamma +,CR44510 + chr3L 69100 intergenic CR44510 +,Lsp1gamma + chr3L_7_65001 chr3L_65001 RAL-837 1202 chr3L 79608 79630 chr3L 79916 79920 6 304 10.0 4.0 7.0 0.8 312 chr3L 79608 intergenic not near genes chr3L 79764 intergenic not near genes chr3L 79920 intergenic not near genes chr3L_6_75001 chr3L_75001 RAL-837 1203 chr3L 79639 79658 chr3L 79912 79916 4 273 6.0 4.0 5.0 0.7 277 chr3L 79639 intergenic not near genes chr3L 79778 intergenic not near genes chr3L 79916 intergenic not near genes chr3L_4_75001 chr3L_75001 RAL-837 1204 chr3L 88729 88779 chr3L 90669 90684 12 1933 1.5 2.0 1.8 4.3 1955 chr3L 88729 intergenic not near genes chr3L 89706 intergenic not near genes chr3L 90684 intergenic not near genes chr3L_12_85001 chr3L_85001 RAL-837 1205 chr3L 96685 96732 chr3L 98236 98275 6 1547 1.5 4.0 2.8 1.6 1590 chr3L 96685 intergenic not near genes chr3L 97480 intergenic CG12483 - chr3L 98275 intron CG12483 - chr3L_6_95001 chr3L_95001 RAL-837 1206 chr3L 110194 110233 chr3L 119376 119409 roo 9 9180 6.0 6.0 6.0 1.3 9215 chr3L 110194 intergenic not near genes chr3L 114802 intergenic not near genes chr3L 119409 intergenic not near genes chr3L_9_110001 chr3L_110001 RAL-837 1207 chr3L 159306 159335 chr3L 159400 159439 11 102 2.5 4.0 3.2 2.6 133 chr3L 159306 intron p130CAS + chr3L 159372 intron p130CAS + chr3L 159439 intron p130CAS + chr3L_11_155001 chr3L_155001 RAL-837 1208 chr3L 161705 161717 chr3L 162539 162563 4 843 5.0 4.0 4.5 0.7 858 chr3L 161705 intron p130CAS + chr3L 162134 intron p130CAS + chr3L 162563 intron p130CAS + chr3L_4_160001 chr3L_160001 RAL-837 1209 chr3L 402679 402709 chr3L 409752 409782 297 6 7070 6.0 6.5 6.2 0.8 7103 chr3L 402679 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409782 intergenic not near genes chr3L_6_405001 chr3L_405001 RAL-837 1210 chr3L 402713 402718 chr3L 409741 409784 297 5 7051 5.5 4.5 5.0 0.8 7071 chr3L 402713 intergenic not near genes chr3L 406248 intergenic not near genes chr3L 409784 intergenic not near genes chr3L_5_405001 chr3L_405001 RAL-837 1211 chr3L 415964 416168 chr3L 416051 416276 15 105 2.5 9.0 5.8 2.2 312 chr3L 415964 intergenic not near genes chr3L 416120 intergenic not near genes chr3L 416276 intergenic not near genes chr3L_15_415001 chr3L_415001 RAL-837 1212 chr3L 437117 437154 chr3L 437251 437278 11 134 2.5 4.5 3.5 2.4 161 chr3L 437117 intron klar - chr3L 437198 intron klar - chr3L 437278 intron klar - chr3L_11_435001 chr3L_435001 RAL-837 1213 chr3L 438835 438870 chr3L 438935 438970 9 96 6.5 3.0 4.8 1.6 135 chr3L 438835 intron klar - chr3L 438902 intron klar - chr3L 438970 intron klar - chr3L_9_435001 chr3L_435001 RAL-837 1214 chr3L 456194 456238 chr3L 456293 456337 12 92 2.5 1.5 2.0 4.0 143 chr3L 456194 intron klar - chr3L 456266 intron klar - chr3L 456337 intron klar - chr3L_12_455001 chr3L_455001 RAL-837 1215 chr3L 459958 460005 chr3L 460055 460102 15 94 3.0 6.5 4.8 2.6 144 chr3L 459958 intron klar - chr3L 460030 intron klar - chr3L 460102 intron klar - chr3L_15_460001 chr3L_460001 RAL-837 1216 chr3L 467722 467769 chr3L 467828 467875 10 102 2.5 3.5 3.0 2.5 153 chr3L 467722 intron klar - chr3L 467798 intron klar - chr3L 467875 intron klar - chr3L_10_465001 chr3L_465001 RAL-837 1217 chr3L 563954 564002 chr3L 564148 564186 8 194 2.0 4.0 3.0 2.0 232 chr3L 563954 intron hipk + chr3L 564070 intron hipk + chr3L 564186 intron hipk + chr3L_8_560001 chr3L_560001 RAL-837 1218 chr3L 592956 592968 chr3L 593042 593044 6 88 2.0 4.5 3.2 1.4 88 chr3L 592956 intergenic MED14 + chr3L 593000 intergenic MED14 + chr3L 593044 intergenic MED14 + chr3L_6_590001 chr3L_590001 RAL-837 1219 chr3L 643050 643071 chr3L 643147 643168 7 97 5.5 6.5 6.0 1.0 118 chr3L 643050 5` UTR CR43334 + chr3L 643109 5` UTR CR43334 + chr3L 643168 5` UTR CR43334 + chr3L_7_640001 chr3L_640001 RAL-837 1220 chr3L 651399 651423 chr3L 651476 651499 10 94 3.0 5.0 4.0 2.0 100 chr3L 651399 intergenic Gale +,CG3402 - chr3L 651449 intergenic CG3402 -,Gale + chr3L 651499 intergenic CG3402 -,Gale + chr3L_10_650001 chr3L_650001 RAL-837 1221 chr3L 705882 705902 chr3L 705998 706018 9 114 7.0 2.0 4.5 1.6 136 chr3L 705882 intergenic CG13895 -,CR44514 + chr3L 705950 3` UTR CG13895 - chr3L 706018 3` UTR CG13895 - chr3L_9_705001 chr3L_705001 RAL-837 1222 chr3L 705906 705929 chr3L 705992 706045 13 112 4.0 1.5 2.8 3.4 139 chr3L 705906 intergenic CG13895 -,CR44514 + chr3L 705976 3` UTR CG13895 - chr3L 706045 3` UTR CG13895 - chr3L_13_705001 chr3L_705001 RAL-837 1223 chr3L 732750 732772 chr3L 733189 733212 6 437 0.5 3.0 1.8 2.1 462 chr3L 732750 intergenic not near genes chr3L 732981 intergenic not near genes chr3L 733212 intergenic not near genes chr3L_6_730001 chr3L_730001 RAL-837 1224 chr3L 789895 789903 chr3L 790400 790408 roo 5 505 12.5 3.5 8.0 0.6 513 chr3L 789895 intergenic not near genes chr3L 790152 intergenic not near genes chr3L 790408 intergenic not near genes chr3L_5_790001 chr3L_790001 RAL-837 1225 chr3L 789908 789940 chr3L 790397 790443 roo 8 500 8.0 3.0 5.5 1.2 535 chr3L 789908 intergenic not near genes chr3L 790176 intergenic not near genes chr3L 790443 intergenic not near genes chr3L_8_790001 chr3L_790001 RAL-837 1226 chr3L 857986 858022 chr3L 866487 866494 Tirant 5 8491 3.5 4.5 4.0 1.0 8508 chr3L 857986 intergenic not near genes chr3L 862240 intergenic not near genes chr3L 866494 intergenic CG12502 + chr3L_5_860001 chr3L_860001 RAL-837 1227 chr3L 922149 922180 chr3L 922246 922271 11 98 6.0 2.0 4.0 2.2 122 chr3L 922149 intron Glut1 + chr3L 922210 intron Glut1 + chr3L 922271 intron Glut1 + chr3L_11_920001 chr3L_920001 RAL-837 1228 chr3L 925156 925209 chr3L 932602 932655 mdg1 12 7439 3.5 3.5 3.5 2.7 7499 chr3L 925156 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932655 intron Glut1 + chr3L_12_925001 chr3L_925001 RAL-837 1229 chr3L 933890 933943 chr3L 934014 934051 10 119 2.5 4.5 3.5 2.2 161 chr3L 933890 intron Glut1 + chr3L 933970 intron Glut1 + chr3L 934051 intron Glut1 + chr3L_10_930001 chr3L_930001 RAL-837 1230 chr3L 939759 939794 chr3L 940895 940935 jockey 11 1138 5.0 8.0 6.5 1.5 1176 chr3L 939759 intron Glut1 + chr3L 940347 intron Glut1 + chr3L 940935 intron Glut1 + chr3L_11_940001 chr3L_940001 RAL-837 1231 chr3L 1008491 1008530 chr3L 1008587 1008616 13 92 4.0 5.0 4.5 2.4 125 chr3L 1008491 intron trio - chr3L 1008554 intron trio - chr3L 1008616 intron trio - chr3L_13_1005001 chr3L_1005001 RAL-837 1232 chr3L 1021581 1021614 chr3L 1021677 1021689 5 83 5.0 5.5 5.2 0.8 108 chr3L 1021581 intron trio - chr3L 1021635 intron trio - chr3L 1021689 intron trio - chr3L_5_1020001 chr3L_1020001 RAL-837 1233 chr3L 1047332 1047384 chr3L 1055162 1055215 412 6 7826 2.5 1.5 2.0 2.0 7883 chr3L 1047332 intron bab1 - chr3L 1051274 intron bab1 - chr3L 1055215 intron bab1 - chr3L_6_1050001 chr3L_1050001 RAL-837 1234 chr3L 1089448 1089497 chr3L 1089575 1089625 12 125 3.0 4.0 3.5 2.7 177 chr3L 1089448 intron bab1 - chr3L 1089536 intron bab1 - chr3L 1089625 intron bab1 - chr3L_12_1085001 chr3L_1085001 RAL-837 1235 chr3L 1103973 1103998 chr3L 1104184 1104206 6 210 5.0 1.5 3.2 1.4 233 chr3L 1103973 intergenic not near genes chr3L 1104090 intergenic not near genes chr3L 1104206 intergenic not near genes chr3L_6_1100001 chr3L_1100001 RAL-837 1236 chr3L 1109639 1109644 chr3L 1109726 1109726 4 95 0.0 4.0 2.0 1.3 87 chr3L 1109639 intergenic not near genes chr3L 1109682 intergenic not near genes chr3L 1109726 intergenic not near genes chr3L_4_1105001 chr3L_1105001 RAL-837 1237 chr3L 1109645 1109650 chr3L 1109723 1109743 6 88 0.0 3.5 1.8 2.1 98 chr3L 1109645 intergenic not near genes chr3L 1109694 intergenic not near genes chr3L 1109743 intergenic not near genes chr3L_6_1105001 chr3L_1105001 RAL-837 1238 chr3L 1145233 1145253 chr3L 1145332 1145352 5 99 5.0 0.5 2.8 1.3 119 chr3L 1145233 intron bab2 - chr3L 1145292 intron bab2 - chr3L 1145352 intron bab2 - chr3L_5_1145001 chr3L_1145001 RAL-837 1239 chr3L 1154120 1154154 chr3L 1163285 1163324 roo 9 9168 5.0 6.0 5.5 1.4 9204 chr3L 1154120 intron bab2 - chr3L 1158722 intron bab2 - chr3L 1163324 intron bab2 - chr3L_9_1155001 chr3L_1155001 RAL-837 1240 chr3L 1175708 1175752 chr3L 1175859 1175901 7 149 2.0 6.0 4.0 1.4 193 chr3L 1175708 intron bab2 - chr3L 1175804 intron bab2 - chr3L 1175901 intron bab2 - chr3L_7_1175001 chr3L_1175001 RAL-837 1241 chr3L 1219587 1219621 chr3L 1227327 1227373 412 11 7747 7.5 4.5 6.0 1.6 7786 chr3L 1219587 intron mwh + chr3L 1223480 intron mwh + chr3L 1227373 intron mwh + chr3L_11_1220001 chr3L_1220001 RAL-837 1242 chr3L 1257634 1257655 chr3L 1257714 1257754 7 94 0.0 6.5 3.2 1.7 120 chr3L 1257634 intron CG9134 + chr3L 1257694 intron CG9134 + chr3L 1257754 intron CG9134 + chr3L_7_1255001 chr3L_1255001 RAL-837 1243 chr3L 1310988 1310989 chr3L 1315835 1315856 6 4848 23.0 32.5 27.8 0.2 4868 chr3L 1310988 exon CG2469 + chr3L 1313422 intergenic CG9186 -,CG9153 + chr3L 1315856 exon CG9153 + chr3L_6_1310001 chr3L_1310001 RAL-837 1244 chr3L 1310985 1310985 chr3L 1315857 1315875 10 4867 21.5 28.5 25.0 0.4 4890 chr3L 1310985 exon CG2469 + chr3L 1313430 intergenic CG9186 -,CG9153 + chr3L 1315875 exon CG9153 + chr3L_10_1310001 chr3L_1310001 RAL-837 1245 chr3L 1347147 1347191 chr3L 1347252 1347263 9 96 2.5 3.0 2.8 2.4 116 chr3L 1347147 intron Ptp61F - chr3L 1347205 intron Ptp61F - chr3L 1347263 intron Ptp61F - chr3L_9_1345001 chr3L_1345001 RAL-837 1246 chr3L 1358736 1358758 chr3L 1359137 1359159 13 399 3.5 0.5 2.0 4.3 423 chr3L 1358736 intron Ptp61F - chr3L 1358948 intron Ptp61F - chr3L 1359159 intron Ptp61F - chr3L_13_1355001 chr3L_1355001 RAL-837 1247 chr3L 1358762 1358787 chr3L 1359133 1359188 11 394 1.0 0.5 0.8 6.1 426 chr3L 1358762 intron Ptp61F - chr3L 1358975 intron Ptp61F - chr3L 1359188 intron Ptp61F - chr3L_11_1355001 chr3L_1355001 RAL-837 1248 chr3L 1374418 1374451 chr3L 1374510 1374523 4 87 8.5 6.0 7.2 0.5 105 chr3L 1374418 intron,intron Ptp61F -,ru + chr3L 1374470 intron,intron Ptp61F -,ru + chr3L 1374523 intron,intron Ptp61F -,ru + chr3L_4_1370001 chr3L_1370001 RAL-837 1249 chr3L 1385158 1385194 chr3L 1385265 1385301 9 100 3.5 3.5 3.5 2.0 143 chr3L 1385158 intron,intron Ptp61F -,ru + chr3L 1385230 intron,intron Ptp61F -,ru + chr3L 1385301 intron,intron Ptp61F -,ru + chr3L_9_1385001 chr3L_1385001 RAL-837 1250 chr3L 1396739 1396756 chr3L 1396839 1396856 6 100 9.0 7.5 8.2 0.7 117 chr3L 1396739 intron Ptp61F - chr3L 1396798 intron Ptp61F - chr3L 1396856 intron Ptp61F - chr3L_6_1395001 chr3L_1395001 RAL-837 1251 chr3L 1501992 1502018 chr3L 1502088 1502119 7 97 2.5 3.0 2.8 1.8 127 chr3L 1501992 intron pUf68 - chr3L 1502056 intron pUf68 - chr3L 1502119 intron pUf68 - chr3L_7_1500001 chr3L_1500001 RAL-837 1252 chr3L 1505985 1506020 chr3L 1513602 1513637 17.6 8 7615 7.0 3.5 5.2 1.3 7652 chr3L 1505985 intron,intron Psa +,cue - chr3L 1509811 intron,intron Psa +,cue - chr3L 1513637 intron,intron Psa +,cue - chr3L_8_1505001 chr3L_1505001 RAL-837 1253 chr3L 1688230 1688270 chr3L 1688379 1688419 8 149 2.5 0.0 1.2 3.6 189 chr3L 1688230 intron CG7991 + chr3L 1688324 intron CG7991 + chr3L 1688419 intron CG7991 + chr3L_8_1685001 chr3L_1685001 RAL-837 1254 chr3L 1740846 1740885 chr3L 1741109 1741147 pogo 8 261 3.5 3.0 3.2 1.9 301 chr3L 1740846 intron Gk + chr3L 1740996 intron Gk + chr3L 1741147 intron Gk + chr3L_8_1740001 chr3L_1740001 RAL-837 1255 chr3L 1754670 1754717 chr3L 1754809 1754856 14 136 4.5 5.5 5.0 2.3 186 chr3L 1754670 intron Cht2 - chr3L 1754763 intron Cht2 - chr3L 1754856 intron Cht2 - chr3L_14_1750001 chr3L_1750001 RAL-837 1256 chr3L 1848620 1848670 chr3L 1848718 1848763 20 94 2.0 2.0 2.0 6.7 143 chr3L 1848620 intergenic not near genes chr3L 1848692 intergenic not near genes chr3L 1848763 intergenic not near genes chr3L_20_1845001 chr3L_1845001 RAL-837 1257 chr3L 1922989 1923019 chr3L 1923099 1923129 10 107 5.0 3.0 4.0 2.0 140 chr3L 1922989 intron Dbx + chr3L 1923059 intron Dbx + chr3L 1923129 intron Dbx + chr3L_10_1920001 chr3L_1920001 RAL-837 1258 chr3L 1923023 1923042 chr3L 1923098 1923127 5 83 2.5 3.0 2.8 1.3 104 chr3L 1923023 intron Dbx + chr3L 1923075 intron Dbx + chr3L 1923127 intron Dbx + chr3L_5_1920001 chr3L_1920001 RAL-837 1259 chr3L 1924946 1924964 chr3L 1925104 1925106 6 155 3.5 3.5 3.5 1.3 160 chr3L 1924946 exon Dbx + chr3L 1925026 intron Dbx + chr3L 1925106 intron Dbx + chr3L_6_1925001 chr3L_1925001 RAL-837 1260 chr3L 1988823 1988866 chr3L 1989022 1989065 11 198 2.0 5.0 3.5 2.4 242 chr3L 1988823 intergenic not near genes chr3L 1988944 intergenic not near genes chr3L 1989065 intergenic not near genes chr3L_11_1985001 chr3L_1985001 RAL-837 1261 chr3L 1991116 1991153 chr3L 1991214 1991251 10 96 0.5 0.0 0.2 8.3 135 chr3L 1991116 intergenic not near genes chr3L 1991184 intergenic not near genes chr3L 1991251 intergenic not near genes chr3L_10_1990001 chr3L_1990001 RAL-837 1262 chr3L 2014288 2014292 chr3L 2014392 2014396 4 104 6.0 8.0 7.0 0.5 108 chr3L 2014288 intergenic not near genes chr3L 2014342 intergenic not near genes chr3L 2014396 intergenic not near genes chr3L_4_2010001 chr3L_2010001 RAL-837 1263 chr3L 2108236 2108257 chr3L 2113460 2113481 copia 5 5221 8.5 6.0 7.2 0.6 5245 chr3L 2108236 intron sls - chr3L 2110858 intron sls - chr3L 2113481 intron sls - chr3L_5_2110001 chr3L_2110001 RAL-837 1264 chr3L 2108259 2108282 chr3L 2113459 2113506 copia 7 5216 6.0 6.0 6.0 1.0 5247 chr3L 2108259 intron sls - chr3L 2110882 intron sls - chr3L 2113506 intron sls - chr3L_7_2110001 chr3L_2110001 RAL-837 1265 chr3L 2139188 2139225 chr3L 2139289 2139316 14 98 4.0 3.0 3.5 3.1 128 chr3L 2139188 intron zormin - chr3L 2139252 intron zormin - chr3L 2139316 intron zormin - chr3L_14_2135001 chr3L_2135001 RAL-837 1266 chr3L 2168760 2168806 chr3L 2168866 2168889 8 103 2.5 5.0 3.8 1.7 129 chr3L 2168760 exon CG15879 - chr3L 2168824 intron CG15879 - chr3L 2168889 intron CG15879 - chr3L_8_2165001 chr3L_2165001 RAL-837 1267 chr3L 2279016 2279069 chr3L 2279187 2279236 7 165 0.0 5.0 2.5 2.0 220 chr3L 2279016 intergenic not near genes chr3L 2279126 intergenic not near genes chr3L 2279236 intergenic not near genes chr3L_7_2275001 chr3L_2275001 RAL-837 1268 chr3L 2302431 2302452 chr3L 2302913 2302934 8 486 2.0 4.0 3.0 2.0 503 chr3L 2302431 intergenic not near genes chr3L 2302682 intergenic not near genes chr3L 2302934 intergenic not near genes chr3L_8_2300001 chr3L_2300001 RAL-837 1269 chr3L 2307982 2308022 chr3L 2308108 2308148 14 125 6.5 4.5 5.5 2.2 166 chr3L 2307982 intergenic not near genes chr3L 2308065 intergenic not near genes chr3L 2308148 intergenic not near genes chr3L_14_2305001 chr3L_2305001 RAL-837 1270 chr3L 2331581 2331614 chr3L 2331658 2331704 12 90 4.0 2.5 3.2 2.9 123 chr3L 2331581 intron MsR1 + chr3L 2331642 intron MsR1 + chr3L 2331704 intron MsR1 + chr3L_12_2330001 chr3L_2330001 RAL-837 1271 chr3L 2411316 2411585 chr3L 2411416 2411662 10 96 0.0 1.5 0.8 5.6 346 chr3L 2411316 intron CG45186 + chr3L 2411489 intron CG45186 + chr3L 2411662 intron CG45186 + chr3L_10_2410001 chr3L_2410001 RAL-837 1272 chr3L 2447510 2447538 chr3L 2456660 2456665 roo 8 9153 1.5 4.5 3.0 2.0 9155 chr3L 2447510 intron CG45186 + chr3L 2452088 intron CG45186 + chr3L 2456665 intron CG45186 + chr3L_8_2450001 chr3L_2450001 RAL-837 1273 chr3L 2493809 2493848 chr3L 2493906 2493956 9 105 2.5 0.0 1.2 4.1 147 chr3L 2493809 intron CG45186 + chr3L 2493882 intron CG45186 + chr3L 2493956 intron CG45186 + chr3L_9_2490001 chr3L_2490001 RAL-837 1274 chr3L 2515402 2515417 chr3L 2515479 2515519 5 92 1.0 4.0 2.5 1.4 117 chr3L 2515402 intron Spn - chr3L 2515460 intron Spn - chr3L 2515519 intron Spn - chr3L_5_2515001 chr3L_2515001 RAL-837 1275 chr3L 2533630 2533654 chr3L 2533732 2533756 5 101 5.5 4.0 4.8 0.9 126 chr3L 2533630 intron Spn - chr3L 2533693 intron Spn - chr3L 2533756 intron Spn - chr3L_5_2530001 chr3L_2530001 RAL-837 1276 chr3L 2533657 2533674 chr3L 2533729 2533744 5 85 3.5 3.5 3.5 1.1 87 chr3L 2533657 intron Spn - chr3L 2533700 intron Spn - chr3L 2533744 intron Spn - chr3L_5_2530001 chr3L_2530001 RAL-837 1277 chr3L 2534622 2534645 chr3L 2534699 2534728 10 84 0.0 2.5 1.2 4.5 106 chr3L 2534622 intron Spn - chr3L 2534675 intron Spn - chr3L 2534728 exon Spn - chr3L_10_2530001 chr3L_2530001 RAL-837 1278 chr3L 2581822 2581872 chr3L 2581940 2581990 8 114 1.5 3.5 2.5 2.3 168 chr3L 2581822 intron msn - chr3L 2581906 intron msn - chr3L 2581990 intron msn - chr3L_8_2580001 chr3L_2580001 RAL-837 1279 chr3L 2591884 2591925 chr3L 2592003 2592022 9 110 2.0 5.5 3.8 1.9 138 chr3L 2591884 intron dos + chr3L 2591953 intron dos + chr3L 2592022 intron dos + chr3L_9_2590001 chr3L_2590001 RAL-837 1280 chr3L 2609658 2609682 chr3L 2609754 2609778 7 94 3.5 0.5 2.0 2.3 120 chr3L 2609658 intron Pxn - chr3L 2609718 intron Pxn - chr3L 2609778 intron Pxn - chr3L_7_2605001 chr3L_2605001 RAL-837 1281 chr3L 2683926 2683979 chr3L 2684022 2684075 9 88 3.0 4.0 3.5 2.0 149 chr3L 2683926 intron Fife - chr3L 2684000 intron Fife - chr3L 2684075 intron Fife - chr3L_9_2680001 chr3L_2680001 RAL-837 1282 chr3L 2719515 2719559 chr3L 2719637 2719681 11 117 4.5 0.5 2.5 3.1 166 chr3L 2719515 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719681 3` UTR Mrtf - chr3L_11_2715001 chr3L_2715001 RAL-837 1283 chr3L 2751436 2751463 chr3L 2755751 2755778 F-element 8 4315 5.5 5.0 5.2 1.3 4342 chr3L 2751436 intron Mrtf - chr3L 2753607 intron Mrtf - chr3L 2755778 intron Mrtf - chr3L_8_2750001 chr3L_2750001 RAL-837 1284 chr3L 2764812 2764855 chr3L 2765133 2765176 7 319 5.5 7.5 6.5 0.9 364 chr3L 2764812 intron Mrtf - chr3L 2764994 intron Mrtf - chr3L 2765176 intron Mrtf - chr3L_7_2760001 chr3L_2760001 RAL-837 1285 chr3L 2795706 2795739 chr3L 2795849 2795867 7 139 4.5 4.0 4.2 1.3 161 chr3L 2795706 intron CG43444 - chr3L 2795786 intron CG43444 - chr3L 2795867 intron CG43444 - chr3L_7_2795001 chr3L_2795001 RAL-837 1286 chr3L 2835145 2835145 chr3L 17500201 17500202 4 14665057 10.5 18.0 14.2 0.3 14665057 chr3L 2835145 intron CG43444 - chr3L 10167674 intron dpr10 - chr3L 17500202 intron Oatp74D + chr3L_4_10165001 chr3L_10165001 RAL-837 1287 chr3L 2906043 2906090 chr3L 2906149 2906197 17 103 3.5 5.5 4.5 3.1 154 chr3L 2906043 intron Shab + chr3L 2906120 intron Shab + chr3L 2906197 intron Shab + chr3L_17_2905001 chr3L_2905001 RAL-837 1288 chr3L 2927819 2927864 chr3L 2936116 2936161 Tirant 12 8291 2.5 2.5 2.5 3.4 8342 chr3L 2927819 intron Shab + chr3L 2931990 intron Shab + chr3L 2936161 intron Shab + chr3L_12_2930001 chr3L_2930001 RAL-837 1289 chr3L 2987697 2987727 chr3L 2987799 2987829 11 99 2.0 0.0 1.0 5.5 132 chr3L 2987697 intergenic not near genes chr3L 2987763 intergenic not near genes chr3L 2987829 intergenic not near genes chr3L_11_2985001 chr3L_2985001 RAL-837 1290 chr3L 3019425 3019462 chr3L 3019755 3019792 7 342 3.5 3.5 3.5 1.6 367 chr3L 3019425 intergenic not near genes chr3L 3019608 intergenic not near genes chr3L 3019792 intergenic not near genes chr3L_7_3015001 chr3L_3015001 RAL-837 1291 chr3L 3050889 3050917 chr3L 3050985 3050993 9 98 7.0 3.0 5.0 1.5 104 chr3L 3050889 intron CG32485 + chr3L 3050941 intron CG32485 + chr3L 3050993 intron CG32485 + chr3L_9_3050001 chr3L_3050001 RAL-837 1292 chr3L 3051723 3051757 chr3L 3051985 3052011 pogo 7 261 4.0 2.5 3.2 1.7 288 chr3L 3051723 3` UTR CG32485 + chr3L 3051867 intergenic CG32485 + chr3L 3052011 intergenic CG32485 + chr3L_7_3050001 chr3L_3050001 RAL-837 1293 chr3L 3061267 3061312 chr3L 3069870 3069915 Tirant 8 8597 3.5 4.5 4.0 1.6 8648 chr3L 3061267 intron CG32486 - chr3L 3065591 intron CG32486 - chr3L 3069915 intron CG32486 - chr3L_8_3065001 chr3L_3065001 RAL-837 1294 chr3L 3259823 3259831 chr3L 3259943 3259951 4 120 3.5 6.5 5.0 0.7 128 chr3L 3259823 intron ckd + chr3L 3259887 intron ckd + chr3L 3259951 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-837 1295 chr3L 3272301 3272348 chr3L 3272410 3272457 10 105 6.0 5.0 5.5 1.5 156 chr3L 3272301 intron CG14960 + chr3L 3272379 intron CG14960 + chr3L 3272457 intron CG14960 + chr3L_10_3270001 chr3L_3270001 RAL-837 1296 chr3L 3281426 3281445 chr3L 3281942 3281961 Doc 4 516 10.0 3.0 6.5 0.5 535 chr3L 3281426 intron CG12017 + chr3L 3281694 intron CG12017 + chr3L 3281961 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-837 1297 chr3L 3281447 3281474 chr3L 3281941 3281949 Doc 7 504 5.5 3.0 4.2 1.3 502 chr3L 3281447 intron CG12017 + chr3L 3281698 intron CG12017 + chr3L 3281949 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-837 1298 chr3L 3314150 3314203 chr3L 3314279 3314301 14 120 3.5 5.5 4.5 2.5 151 chr3L 3314150 intergenic ZnT63C +,Drsl2 + chr3L 3314226 intergenic Drsl2 +,ZnT63C + chr3L 3314301 intergenic Drsl2 +,ZnT63C + chr3L_14_3310001 chr3L_3310001 RAL-837 1299 chr3L 3470139 3470183 chr3L 3470235 3470279 10 95 1.5 3.5 2.5 2.9 140 chr3L 3470139 intron CG14971 - chr3L 3470209 intron CG14971 - chr3L 3470279 intron CG14971 - chr3L_10_3470001 chr3L_3470001 RAL-837 1300 chr3L 3475068 3475084 chr3L 3475522 3475548 jockey 9 459 4.5 4.5 4.5 1.6 480 chr3L 3475068 intron CG42324 + chr3L 3475308 intron CG42324 + chr3L 3475548 intron CG42324 + chr3L_9_3475001 chr3L_3475001 RAL-837 1301 chr3L 3475088 3475109 chr3L 3475521 3475541 jockey 6 446 2.0 4.5 3.2 1.4 453 chr3L 3475088 intron CG42324 + chr3L 3475314 intron CG42324 + chr3L 3475541 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-837 1302 chr3L 3512952 3512958 chr3L 3513052 3513058 4 100 9.0 6.0 7.5 0.5 106 chr3L 3512952 intergenic ImpE2 - chr3L 3513005 intergenic ImpE2 - chr3L 3513058 intergenic ImpE2 - chr3L_4_3510001 chr3L_3510001 RAL-837 1303 chr3L 3512960 3512980 chr3L 3513050 3513080 6 98 5.5 5.5 5.5 0.9 120 chr3L 3512960 intergenic ImpE2 - chr3L 3513020 intergenic ImpE2 - chr3L 3513080 intergenic ImpE2 - chr3L_6_3510001 chr3L_3510001 RAL-837 1304 chr3L 3601300 3601326 chr3L 3606607 3606657 copia 7 5326 5.0 1.0 3.0 1.8 5357 chr3L 3601300 intron Eip63E + chr3L 3603978 intron Eip63E + chr3L 3606657 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-837 1305 chr3L 3627243 3627264 chr3L 3627345 3627389 6 120 3.5 3.0 3.2 1.4 146 chr3L 3627243 intron dar1 + chr3L 3627316 intron dar1 + chr3L 3627389 intron dar1 + chr3L_6_3625001 chr3L_3625001 RAL-837 1306 chr3L 3642563 3642591 chr3L 3642679 3642724 11 127 6.5 4.5 5.5 1.7 161 chr3L 3642563 intron dar1 + chr3L 3642644 intron dar1 + chr3L 3642724 intron dar1 + chr3L_11_3640001 chr3L_3640001 RAL-837 1307 chr3L 3680637 3680650 chr3L 3682129 3682137 4 1491 9.0 5.5 7.2 0.5 1500 chr3L 3680637 intergenic not near genes chr3L 3681387 intergenic not near genes chr3L 3682137 intergenic not near genes chr3L_4_3680001 chr3L_3680001 RAL-837 1308 chr3L 3766717 3766747 chr3L 3766823 3766853 11 104 2.0 2.0 2.0 3.7 136 chr3L 3766717 intron CG32264 - chr3L 3766785 intron CG32264 - chr3L 3766853 intron CG32264 - chr3L_11_3765001 chr3L_3765001 RAL-837 1309 chr3L 3768943 3768982 chr3L 3769064 3769103 20 117 3.5 2.5 3.0 5.0 160 chr3L 3768943 intron CG32264 - chr3L 3769023 intron CG32264 - chr3L 3769103 exon CG32264 - chr3L_20_3765001 chr3L_3765001 RAL-837 1310 chr3L 3797241 3797263 chr3L 3797325 3797366 5 99 0.0 5.0 2.5 1.4 125 chr3L 3797241 intron CG32264 - chr3L 3797304 intron CG32264 - chr3L 3797366 intron CG32264 - chr3L_5_3795001 chr3L_3795001 RAL-837 1311 chr3L 3833717 3833763 chr3L 3833978 3833989 pogo 7 256 4.5 1.0 2.8 1.8 272 chr3L 3833717 intron enc + chr3L 3833853 intron enc + chr3L 3833989 intron enc + chr3L_7_3830001 chr3L_3830001 RAL-837 1312 chr3L 3877424 3877442 chr3L 3877562 3877590 9 147 1.0 1.5 1.2 4.1 166 chr3L 3877424 intergenic not near genes chr3L 3877507 intergenic not near genes chr3L 3877590 intergenic not near genes chr3L_9_3875001 chr3L_3875001 RAL-837 1313 chr3L 3889114 3889147 chr3L 3889217 3889250 10 103 2.5 1.5 2.0 3.3 136 chr3L 3889114 intergenic not near genes chr3L 3889182 intergenic not near genes chr3L 3889250 intergenic not near genes chr3L_10_3885001 chr3L_3885001 RAL-837 1314 chr3L 3925989 3926042 chr3L 3926100 3926140 6 102 2.0 0.5 1.2 2.7 151 chr3L 3925989 intron Eip63F-1 - chr3L 3926064 intron Eip63F-1 - chr3L 3926140 intron Eip63F-1 - chr3L_6_3925001 chr3L_3925001 RAL-837 1315 chr3L 3936446 3936492 chr3L 3936556 3936605 9 98 4.5 4.5 4.5 1.6 159 chr3L 3936446 3` UTR CG10866 - chr3L 3936526 3` UTR CG10866 - chr3L 3936605 3` UTR CG10866 - chr3L_9_3935001 chr3L_3935001 RAL-837 1316 chr3L 4074344 4074369 chr3L 4074683 4074703 5 336 4.5 4.0 4.2 1.0 359 chr3L 4074344 3` UTR Gad1 - chr3L 4074524 3` UTR Gad1 - chr3L 4074703 3` UTR Gad1 - chr3L_5_4070001 chr3L_4070001 RAL-837 1317 chr3L 4328732 4328764 chr3L 4336240 4336275 412 9 7513 1.5 2.0 1.8 3.2 7543 chr3L 4328732 intron Cip4 - chr3L 4332504 intron Cip4 - chr3L 4336275 exon Cip4 - chr3L_9_4330001 chr3L_4330001 RAL-837 1318 chr3L 4446195 4446240 chr3L 4446296 4446340 4 103 3.5 3.5 3.5 0.9 145 chr3L 4446195 3` UTR CR45739 - chr3L 4446268 3` UTR CR45739 - chr3L 4446340 3` UTR CR45739 - chr3L_4_4445001 chr3L_4445001 RAL-837 1319 chr3L 4519403 4519454 chr3L 4519499 4519528 10 88 4.0 3.0 3.5 2.2 125 chr3L 4519403 intron Tie - chr3L 4519466 intron Tie - chr3L 4519528 intron Tie - chr3L_10_4515001 chr3L_4515001 RAL-837 1320 chr3L 4543345 4543355 chr3L 4543791 4543801 4 446 4.0 4.5 4.2 0.8 456 chr3L 4543345 intron CG11357 + chr3L 4543573 intron CG11357 + chr3L 4543801 intron CG11357 + chr3L_4_4540001 chr3L_4540001 RAL-837 1321 chr3L 4580288 4580335 chr3L 4580388 4580400 13 97 3.0 1.0 2.0 4.3 112 chr3L 4580288 intron CG42540 + chr3L 4580344 intron CG42540 + chr3L 4580400 intron CG42540 + chr3L_13_4580001 chr3L_4580001 RAL-837 1322 chr3L 4607248 4607290 chr3L 4607359 4607381 6 104 1.5 3.0 2.2 1.9 133 chr3L 4607248 intron Src64B - chr3L 4607314 intron Src64B - chr3L 4607381 intron Src64B - chr3L_6_4605001 chr3L_4605001 RAL-837 1323 chr3L 4652563 4652598 chr3L 4652654 4652671 9 92 2.5 2.5 2.5 2.6 108 chr3L 4652563 intron axo - chr3L 4652617 intron axo - chr3L 4652671 intron axo - chr3L_9_4650001 chr3L_4650001 RAL-837 1324 chr3L 4676017 4676048 chr3L 4676118 4676125 10 99 1.5 0.0 0.8 5.6 108 chr3L 4676017 intron axo - chr3L 4676071 intron axo - chr3L 4676125 intron axo - chr3L_10_4675001 chr3L_4675001 RAL-837 1325 chr3L 4754740 4754767 chr3L 4754836 4754863 5 93 1.5 5.0 3.2 1.2 123 chr3L 4754740 intron RhoGEF64C + chr3L 4754802 intron RhoGEF64C + chr3L 4754863 intron RhoGEF64C + chr3L_5_4750001 chr3L_4750001 RAL-837 1326 chr3L 4775833 4775866 chr3L 4775941 4775952 10 104 5.5 4.5 5.0 1.7 119 chr3L 4775833 intron RhoGEF64C + chr3L 4775892 intron RhoGEF64C + chr3L 4775952 intron RhoGEF64C + chr3L_10_4775001 chr3L_4775001 RAL-837 1327 chr3L 4837874 4837904 chr3L 4837973 4838003 11 98 6.0 3.0 4.5 2.0 129 chr3L 4837874 3` UTR CG13707 - chr3L 4837938 3` UTR CG13707 - chr3L 4838003 3` UTR CG13707 - chr3L_11_4835001 chr3L_4835001 RAL-837 1328 chr3L 4837911 4837921 chr3L 4837972 4837988 6 76 3.0 3.0 3.0 1.5 77 chr3L 4837911 3` UTR CG13707 - chr3L 4837950 3` UTR CG13707 - chr3L 4837988 3` UTR CG13707 - chr3L_6_4835001 chr3L_4835001 RAL-837 1329 chr3L 4901117 4901161 chr3L 4907327 4907371 diver 11 6204 4.0 2.5 3.2 2.6 6254 chr3L 4901117 intergenic CG13704 + chr3L 4904244 intergenic not near genes chr3L 4907371 intergenic not near genes chr3L_11_4900001 chr3L_4900001 RAL-837 1330 chr3L 4911639 4911692 chr3L 4911767 4911820 11 122 1.5 2.5 2.0 3.7 181 chr3L 4911639 intron Rh50 + chr3L 4911730 intron Rh50 + chr3L 4911820 intron Rh50 + chr3L_11_4910001 chr3L_4910001 RAL-837 1331 chr3L 4943839 4943880 chr3L 4944026 4944066 5 185 1.0 2.0 1.5 2.0 227 chr3L 4943839 intron Con - chr3L 4943952 intron Con - chr3L 4944066 intron Con - chr3L_5_4940001 chr3L_4940001 RAL-837 1332 chr3L 4967125 4967168 chr3L 4967252 4967295 11 126 3.5 3.0 3.2 2.6 170 chr3L 4967125 intron Con - chr3L 4967210 intron Con - chr3L 4967295 intron Con - chr3L_11_4965001 chr3L_4965001 RAL-837 1333 chr3L 5028787 5028830 chr3L 5028885 5028928 5 96 2.0 1.0 1.5 2.0 141 chr3L 5028787 intron Con - chr3L 5028858 intron Con - chr3L 5028928 intron Con - chr3L_5_5025001 chr3L_5025001 RAL-837 1334 chr3L 5045440 5045476 chr3L 5050241 5050242 Doc 12 4793 6.5 8.5 7.5 1.4 4802 chr3L 5045440 intron Con - chr3L 5047841 intron Con - chr3L 5050242 intron Con - chr3L_12_5045001 chr3L_5045001 RAL-837 1335 chr3L 5103595 5103611 chr3L 5103695 5103711 5 100 7.5 0.0 3.8 1.0 116 chr3L 5103595 intergenic not near genes chr3L 5103653 intergenic not near genes chr3L 5103711 intergenic not near genes chr3L_5_5100001 chr3L_5100001 RAL-837 1336 chr3L 5104467 5104508 chr3L 5124621 5124632 11 20147 4.5 1.5 3.0 2.8 20165 chr3L 5104467 intergenic not near genes chr3L 5114550 intergenic not near genes chr3L 5124632 intergenic not near genes chr3L_11_5110001 chr3L_5110001 RAL-837 1337 chr3L 5203087 5203114 chr3L 5203212 5203239 8 125 0.0 2.5 1.2 3.6 152 chr3L 5203087 intron shep - chr3L 5203163 intron shep - chr3L 5203239 intron shep - chr3L_8_5200001 chr3L_5200001 RAL-837 1338 chr3L 5223413 5223440 chr3L 5223515 5223542 4 102 4.0 4.0 4.0 0.8 129 chr3L 5223413 intron shep - chr3L 5223478 intron shep - chr3L 5223542 intron shep - chr3L_4_5220001 chr3L_5220001 RAL-837 1339 chr3L 5261146 5261174 chr3L 5261245 5261273 8 99 5.0 4.0 4.5 1.5 127 chr3L 5261146 intron shep - chr3L 5261210 intron shep - chr3L 5261273 intron shep - chr3L_8_5260001 chr3L_5260001 RAL-837 1340 chr3L 5294164 5294192 chr3L 5294333 5294361 10 168 4.0 6.5 5.2 1.6 197 chr3L 5294164 intergenic not near genes chr3L 5294262 intergenic not near genes chr3L 5294361 intergenic not near genes chr3L_10_5290001 chr3L_5290001 RAL-837 1341 chr3L 5294193 5294204 chr3L 5294323 5294337 4 150 3.5 3.5 3.5 0.9 144 chr3L 5294193 intergenic not near genes chr3L 5294265 intergenic not near genes chr3L 5294337 intergenic not near genes chr3L_4_5290001 chr3L_5290001 RAL-837 1342 chr3L 5299145 5299165 chr3L 5306589 5306621 Quasimodo 4 7453 2.5 2.0 2.2 1.2 7476 chr3L 5299145 intergenic not near genes chr3L 5302883 intergenic not near genes chr3L 5306621 intergenic not near genes chr3L_4_5300001 chr3L_5300001 RAL-837 1343 chr3L 5327445 5327478 chr3L 5327550 5327583 11 104 1.5 2.0 1.8 3.9 138 chr3L 5327445 intergenic not near genes chr3L 5327514 intergenic not near genes chr3L 5327583 intergenic not near genes chr3L_11_5325001 chr3L_5325001 RAL-837 1344 chr3L 5351092 5351135 chr3L 5351197 5351240 10 101 2.5 4.0 3.2 2.4 148 chr3L 5351092 intron lama - chr3L 5351166 intron lama - chr3L 5351240 intron lama - chr3L_10_5350001 chr3L_5350001 RAL-837 1345 chr3L 5388202 5388232 chr3L 5388527 5388546 8 334 5.0 2.0 3.5 1.8 344 chr3L 5388202 intergenic not near genes chr3L 5388374 intergenic not near genes chr3L 5388546 intergenic not near genes chr3L_8_5385001 chr3L_5385001 RAL-837 1346 chr3L 5449521 5449559 chr3L 5449620 5449658 6 95 2.5 4.5 3.5 1.3 137 chr3L 5449521 intergenic not near genes chr3L 5449590 intergenic not near genes chr3L 5449658 intergenic not near genes chr3L_6_5445001 chr3L_5445001 RAL-837 1347 chr3L 5498383 5498429 chr3L 5498492 5498526 9 91 0.0 5.0 2.5 2.6 143 chr3L 5498383 exon blanks - chr3L 5498454 exon blanks - chr3L 5498526 exon blanks - chr3L_9_5495001 chr3L_5495001 RAL-837 1348 chr3L 5504544 5504570 chr3L 5504642 5504668 13 97 4.0 3.5 3.8 2.7 124 chr3L 5504544 intron CG34342 - chr3L 5504606 intron CG34342 - chr3L 5504668 intron CG34342 - chr3L_13_5500001 chr3L_5500001 RAL-837 1349 chr3L 5531175 5531227 chr3L 5531276 5531328 15 89 0.0 4.5 2.2 4.7 153 chr3L 5531175 intergenic not near genes chr3L 5531252 intergenic not near genes chr3L 5531328 intergenic not near genes chr3L_15_5530001 chr3L_5530001 RAL-837 1350 chr3L 5613478 5613498 chr3L 5613625 5613645 4 147 4.5 4.0 4.2 0.8 167 chr3L 5613478 intergenic not near genes chr3L 5613562 intergenic not near genes chr3L 5613645 intergenic not near genes chr3L_4_5610001 chr3L_5610001 RAL-837 1351 chr3L 5677173 5677206 chr3L 5677269 5677302 12 95 0.0 7.0 3.5 2.7 129 chr3L 5677173 intron sif + chr3L 5677238 intron sif + chr3L 5677302 intron sif + chr3L_12_5675001 chr3L_5675001 RAL-837 1352 chr3L 5784542 5784552 chr3L 5784652 5784662 4 110 2.5 4.0 3.2 1.0 120 chr3L 5784542 3` UTR,3` UTR,intron PGRP-LD +,Pmi +,Cralbp - chr3L 5784602 3` UTR,3` UTR,intron PGRP-LD +,Pmi +,Cralbp - chr3L 5784662 3` UTR,3` UTR,intron PGRP-LD +,Pmi +,Cralbp - chr3L_4_5780001 chr3L_5780001 RAL-837 1353 chr3L 5910012 5910061 chr3L 5910273 5910322 pogo 16 258 6.0 5.5 5.8 2.4 310 chr3L 5910012 intron CG13288 + chr3L 5910167 intron CG13288 + chr3L 5910322 intron CG13288 + chr3L_16_5910001 chr3L_5910001 RAL-837 1354 chr3L 5926313 5926338 chr3L 5926510 5926513 9 197 3.0 4.0 3.5 2.0 200 chr3L 5926313 intron Vap-33B + chr3L 5926413 intron Vap-33B + chr3L 5926513 intron Vap-33B + chr3L_9_5925001 chr3L_5925001 RAL-837 1355 chr3L 5987029 5987038 chr3L 5987128 5987137 4 99 0.0 4.0 2.0 1.3 108 chr3L 5987029 intergenic not near genes chr3L 5987083 intergenic not near genes chr3L 5987137 intergenic not near genes chr3L_4_5985001 chr3L_5985001 RAL-837 1356 chr3L 6001666 6001713 chr3L 6004384 6004433 jockey 11 2715 3.0 5.0 4.0 2.2 2767 chr3L 6001666 intron PVRAP + chr3L 6003050 intron PVRAP + chr3L 6004433 intron PVRAP + chr3L_11_6000001 chr3L_6000001 RAL-837 1357 chr3L 6116687 6116705 chr3L 6116791 6116809 4 104 6.0 2.5 4.2 0.8 122 chr3L 6116687 intron Ets65A + chr3L 6116748 intron Ets65A + chr3L 6116809 intron Ets65A + chr3L_4_6115001 chr3L_6115001 RAL-837 1358 chr3L 6116706 6116727 chr3L 6116786 6116831 7 92 2.0 2.5 2.2 2.2 125 chr3L 6116706 intron Ets65A + chr3L 6116768 intron Ets65A + chr3L 6116831 intron Ets65A + chr3L_7_6115001 chr3L_6115001 RAL-837 1359 chr3L 6162340 6162373 chr3L 6162441 6162474 6 101 4.0 3.0 3.5 1.3 134 chr3L 6162340 intergenic CR45744 - chr3L 6162407 intergenic CR45744 - chr3L 6162474 intergenic CR45744 - chr3L_6_6160001 chr3L_6160001 RAL-837 1360 chr3L 6185581 6185633 chr3L 6185679 6185731 13 95 4.0 2.0 3.0 3.2 150 chr3L 6185581 exon CG43293 + chr3L 6185656 intron CG43293 + chr3L 6185731 exon CG43293 + chr3L_13_6185001 chr3L_6185001 RAL-837 1361 chr3L 6220902 6220919 chr3L 6230074 6230081 roo 5 9170 8.5 3.0 5.8 0.7 9179 chr3L 6220902 5` UTR pncr008:3L + chr3L 6225492 intergenic not near genes chr3L 6230081 intergenic not near genes chr3L_5_6225001 chr3L_6225001 RAL-837 1362 chr3L 6220920 6220945 chr3L 6230070 6230117 roo 12 9168 2.5 3.0 2.8 3.2 9197 chr3L 6220920 5` UTR pncr008:3L + chr3L 6225518 intergenic not near genes chr3L 6230117 intergenic not near genes chr3L_12_6225001 chr3L_6225001 RAL-837 1363 chr3L 6334990 6335038 chr3L 6335481 6335529 297 10 483 2.0 7.0 4.5 1.8 539 chr3L 6334990 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335529 intron CG13300 - chr3L_10_6335001 chr3L_6335001 RAL-837 1364 chr3L 6405642 6405691 chr3L 6432126 6432144 roo 18 26478 1.5 3.5 2.5 5.1 26502 chr3L 6405642 intron CG42747 + chr3L 6418893 intron CG42747 + chr3L 6432144 intron CG42747 + chr3L_18_6415001 chr3L_6415001 RAL-837 1365 chr3L 6562855 6562865 chr3L 6562919 6562960 5 87 3.5 4.5 4.0 1.0 105 chr3L 6562855 intron CG18769 + chr3L 6562908 intron CG18769 + chr3L 6562960 intron CG18769 + chr3L_5_6560001 chr3L_6560001 RAL-837 1366 chr3L 6668944 6668987 chr3L 6669045 6669088 12 98 6.0 1.5 3.8 2.5 144 chr3L 6668944 intergenic not near genes chr3L 6669016 intergenic not near genes chr3L 6669088 intergenic not near genes chr3L_12_6665001 chr3L_6665001 RAL-837 1367 chr3L 6887497 6887535 chr3L 6895009 6895036 roo 7 7510 2.0 3.5 2.8 1.8 7539 chr3L 6887497 intergenic not near genes chr3L 6891266 intergenic not near genes chr3L 6895036 intergenic not near genes chr3L_7_6890001 chr3L_6890001 RAL-837 1368 chr3L 6900897 6900903 chr3L 6900993 6900999 4 96 0.0 2.5 1.2 1.8 102 chr3L 6900897 intergenic not near genes chr3L 6900948 intergenic not near genes chr3L 6900999 intergenic not near genes chr3L_4_6900001 chr3L_6900001 RAL-837 1369 chr3L 6934330 6934338 chr3L 6934451 6934469 4 128 8.0 1.5 4.8 0.7 139 chr3L 6934330 exon CG14820 + chr3L 6934400 intron CG14820 + chr3L 6934469 intron CG14820 + chr3L_4_6930001 chr3L_6930001 RAL-837 1370 chr3L 6934343 6934365 chr3L 6934448 6934496 9 125 4.5 1.5 3.0 2.2 153 chr3L 6934343 exon CG14820 + chr3L 6934420 intron CG14820 + chr3L 6934496 exon CG14820 + chr3L_9_6930001 chr3L_6930001 RAL-837 1371 chr3L 6990715 6990751 chr3L 6990802 6990842 8 93 1.5 3.0 2.2 2.5 127 chr3L 6990715 5` UTR bin + chr3L 6990778 5` UTR bin + chr3L 6990842 exon bin + chr3L_8_6990001 chr3L_6990001 RAL-837 1372 chr3L 6994894 6994910 chr3L 6995524 6995540 BS 4 628 4.0 3.0 3.5 0.9 646 chr3L 6994894 intergenic bin + chr3L 6995217 intergenic not near genes chr3L 6995540 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-837 1373 chr3L 7022284 7022325 chr3L 7022402 7022413 7 109 9.0 3.5 6.2 1.0 129 chr3L 7022284 intron Mp + chr3L 7022348 intron Mp + chr3L 7022413 intron Mp + chr3L_7_7020001 chr3L_7020001 RAL-837 1374 chr3L 7187383 7187421 chr3L 7187485 7187496 12 100 0.0 3.0 1.5 4.8 113 chr3L 7187383 intron Dscam2 - chr3L 7187440 intron Dscam2 - chr3L 7187496 intron Dscam2 - chr3L_12_7185001 chr3L_7185001 RAL-837 1375 chr3L 7197944 7197978 chr3L 7198042 7198076 9 94 5.0 0.0 2.5 2.6 132 chr3L 7197944 intergenic not near genes chr3L 7198010 intergenic not near genes chr3L 7198076 intergenic not near genes chr3L_9_7195001 chr3L_7195001 RAL-837 1376 chr3L 7258919 7258929 chr3L 7259079 7259089 7 160 2.5 5.0 3.8 1.5 170 chr3L 7258919 intron CG14830 - chr3L 7259004 intron CG14830 - chr3L 7259089 intron CG14830 - chr3L_7_7255001 chr3L_7255001 RAL-837 1377 chr3L 7277087 7277133 chr3L 7277209 7277255 8 121 3.5 5.0 4.2 1.5 168 chr3L 7277087 exon unc-13-4A - chr3L 7277171 intron unc-13-4A - chr3L 7277255 intron unc-13-4A - chr3L_8_7275001 chr3L_7275001 RAL-837 1378 chr3L 7285443 7285471 chr3L 7285536 7285561 6 93 2.0 3.0 2.5 1.7 118 chr3L 7285443 intron unc-13-4A - chr3L 7285502 intron unc-13-4A - chr3L 7285561 intron unc-13-4A - chr3L_6_7285001 chr3L_7285001 RAL-837 1379 chr3L 7311568 7311620 chr3L 7311679 7311731 14 105 3.0 4.0 3.5 3.1 163 chr3L 7311568 intron unc-13-4A - chr3L 7311650 intron unc-13-4A - chr3L 7311731 intron unc-13-4A - chr3L_14_7310001 chr3L_7310001 RAL-837 1380 chr3L 7371175 7371197 chr3L 7371267 7371301 6 98 2.0 4.0 3.0 1.5 126 chr3L 7371175 intron akirin + chr3L 7371238 intron akirin + chr3L 7371301 intron akirin + chr3L_6_7370001 chr3L_7370001 RAL-837 1381 chr3L 7371201 7371211 chr3L 7371266 7371286 6 90 2.0 4.0 3.0 1.5 85 chr3L 7371201 intron akirin + chr3L 7371244 intron akirin + chr3L 7371286 intron akirin + chr3L_6_7370001 chr3L_7370001 RAL-837 1382 chr3L 7375915 7375948 chr3L 7376011 7376044 11 94 8.0 3.0 5.5 1.7 129 chr3L 7375915 intron SMSr - chr3L 7375980 intron SMSr - chr3L 7376044 intron SMSr - chr3L_11_7375001 chr3L_7375001 RAL-837 1383 chr3L 7377299 7377349 chr3L 7380423 7380448 297 10 3116 3.0 9.0 6.0 1.4 3149 chr3L 7377299 intron SMSr - chr3L 7378874 intron SMSr - chr3L 7380448 intron SMSr - chr3L_10_7375001 chr3L_7375001 RAL-837 1384 chr3L 7426009 7426016 chr3L 7426398 7426418 4 394 9.5 2.5 6.0 0.6 409 chr3L 7426009 intron CG42458 + chr3L 7426214 intron CG42458 + chr3L 7426418 intron CG42458 + chr3L_4_7425001 chr3L_7425001 RAL-837 1385 chr3L 7426021 7426027 chr3L 7426397 7426429 5 392 6.5 2.5 4.5 0.9 408 chr3L 7426021 intron CG42458 + chr3L 7426225 intron CG42458 + chr3L 7426429 intron CG42458 + chr3L_5_7425001 chr3L_7425001 RAL-837 1386 chr3L 7443999 7444024 chr3L 7444117 7444142 11 118 6.5 0.0 3.2 2.6 143 chr3L 7443999 intron CG42458 + chr3L 7444070 intron CG42458 + chr3L 7444142 intron CG42458 + chr3L_11_7440001 chr3L_7440001 RAL-837 1387 chr3L 7461661 7461697 chr3L 7461764 7461818 4 116 5.0 0.0 2.5 1.1 157 chr3L 7461661 intergenic not near genes chr3L 7461740 intergenic not near genes chr3L 7461818 intergenic not near genes chr3L_4_7460001 chr3L_7460001 RAL-837 1388 chr3L 7462929 7462971 chr3L 7463055 7463091 7 126 0.0 5.0 2.5 2.0 162 chr3L 7462929 intergenic not near genes chr3L 7463010 intergenic not near genes chr3L 7463091 intergenic not near genes chr3L_7_7460001 chr3L_7460001 RAL-837 1389 chr3L 7488868 7488878 chr3L 7488956 7488979 4 98 8.0 2.0 5.0 0.7 111 chr3L 7488868 intergenic not near genes chr3L 7488924 intergenic not near genes chr3L 7488979 intergenic not near genes chr3L_4_7485001 chr3L_7485001 RAL-837 1390 chr3L 7488881 7488892 chr3L 7488952 7488993 8 94 5.5 2.0 3.8 1.7 112 chr3L 7488881 intergenic not near genes chr3L 7488937 intergenic not near genes chr3L 7488993 intergenic not near genes chr3L_8_7485001 chr3L_7485001 RAL-837 1391 chr3L 7498743 7498769 chr3L 7503540 7503566 F-element 8 4794 6.0 4.0 5.0 1.3 4823 chr3L 7498743 5` UTR CG8539 - chr3L 7501154 intergenic not near genes chr3L 7503566 intergenic not near genes chr3L_8_7500001 chr3L_7500001 RAL-837 1392 chr3L 7498772 7498785 chr3L 7503539 7503582 F-element 9 4789 4.5 4.0 4.2 1.7 4810 chr3L 7498772 5` UTR CG8539 - chr3L 7501177 intergenic not near genes chr3L 7503582 intergenic not near genes chr3L_9_7500001 chr3L_7500001 RAL-837 1393 chr3L 7591131 7591179 chr3L 7591242 7591290 9 108 4.0 4.0 4.0 1.8 159 chr3L 7591131 intergenic CG7716 - chr3L 7591210 intergenic CG7716 - chr3L 7591290 intergenic CG7716 - chr3L_9_7590001 chr3L_7590001 RAL-837 1394 chr3L 7710934 7710979 chr3L 7711126 7711171 14 191 3.0 2.0 2.5 4.0 237 chr3L 7710934 intron,exon CG32373 +,Ank2 - chr3L 7711052 intron,intron CG32373 +,Ank2 - chr3L 7711171 intron,intron CG32373 +,Ank2 - chr3L_14_7710001 chr3L_7710001 RAL-837 1395 chr3L 7752146 7752178 chr3L 7752255 7752279 13 119 2.0 4.0 3.0 3.2 133 chr3L 7752146 intron CG32373 + chr3L 7752212 intron CG32373 + chr3L 7752279 intron CG32373 + chr3L_13_7750001 chr3L_7750001 RAL-837 1396 chr3L 7769289 7769320 chr3L 7769401 7769434 4 113 1.0 4.5 2.8 1.1 145 chr3L 7769289 intron Clk - chr3L 7769362 intron Clk - chr3L 7769434 intron Clk - chr3L_4_7765001 chr3L_7765001 RAL-837 1397 chr3L 7787460 7787488 chr3L 7787565 7787600 5 110 2.0 3.5 2.8 1.3 140 chr3L 7787460 intron CG32369 - chr3L 7787530 intron CG32369 - chr3L 7787600 intron CG32369 - chr3L_5_7785001 chr3L_7785001 RAL-837 1398 chr3L 7793695 7793738 chr3L 7800767 7800785 297 15 7067 2.5 3.5 3.0 3.8 7090 chr3L 7793695 intron CG32369 - chr3L 7797240 intron CG32369 - chr3L 7800785 intron CG32369 - chr3L_15_7795001 chr3L_7795001 RAL-837 1399 chr3L 7845366 7845386 chr3L 7845469 7845489 5 103 6.0 0.5 3.2 1.2 123 chr3L 7845366 intron Pdp1 - chr3L 7845428 intron Pdp1 - chr3L 7845489 intron Pdp1 - chr3L_5_7845001 chr3L_7845001 RAL-837 1400 chr3L 7882149 7882189 chr3L 7882255 7882300 6 104 2.0 5.0 3.5 1.3 151 chr3L 7882149 intron CG32365 + chr3L 7882224 intron CG32365 + chr3L 7882300 intron CG32365 + chr3L_6_7880001 chr3L_7880001 RAL-837 1401 chr3L 7916811 7916859 chr3L 7926002 7926029 roo 11 9181 6.0 4.0 5.0 1.8 9218 chr3L 7916811 3` UTR syd - chr3L 7921420 intron syd - chr3L 7926029 3` UTR syd - chr3L_11_7920001 chr3L_7920001 RAL-837 1402 chr3L 7985350 7985358 chr3L 7987698 7987706 NOF 6 2348 8.5 7.0 7.8 0.7 2356 chr3L 7985350 intron nmo + chr3L 7986528 intron nmo + chr3L 7987706 intron nmo + chr3L_6_7985001 chr3L_7985001 RAL-837 1403 chr3L 7985363 7985389 chr3L 7987689 7987737 NOF 12 2342 1.5 6.0 3.8 2.5 2374 chr3L 7985363 intron nmo + chr3L 7986550 intron nmo + chr3L 7987737 intron nmo + chr3L_12_7985001 chr3L_7985001 RAL-837 1404 chr3L 7997599 7997611 chr3L 7997700 7997712 5 101 5.0 2.5 3.8 1.0 113 chr3L 7997599 intron nmo + chr3L 7997656 intron nmo + chr3L 7997712 intron nmo + chr3L_5_7995001 chr3L_7995001 RAL-837 1405 chr3L 8026472 8026514 chr3L 8026654 8026696 9 181 3.0 4.0 3.5 2.0 224 chr3L 8026472 intron nmo + chr3L 8026584 intron nmo + chr3L 8026696 intron nmo + chr3L_9_8025001 chr3L_8025001 RAL-837 1406 chr3L 8081413 8081421 chr3L 8081516 8081524 5 103 5.0 5.5 5.2 0.8 111 chr3L 8081413 intron Ect4 + chr3L 8081468 intron Ect4 + chr3L 8081524 intron Ect4 + chr3L_5_8080001 chr3L_8080001 RAL-837 1407 chr3L 8081433 8081448 chr3L 8081504 8081551 7 89 3.0 2.5 2.8 1.8 118 chr3L 8081433 intron Ect4 + chr3L 8081492 intron Ect4 + chr3L 8081551 intron Ect4 + chr3L_7_8080001 chr3L_8080001 RAL-837 1408 chr3L 8149746 8149794 chr3L 8149872 8149879 16 123 1.5 5.0 3.2 3.8 133 chr3L 8149746 intron CG13676 - chr3L 8149812 intron CG13676 - chr3L 8149879 intron CG13676 - chr3L_16_8145001 chr3L_8145001 RAL-837 1409 chr3L 8225796 8225828 chr3L 8225895 8225897 10 95 5.0 1.5 3.2 2.4 101 chr3L 8225796 intergenic not near genes chr3L 8225846 intergenic not near genes chr3L 8225897 intergenic not near genes chr3L_10_8225001 chr3L_8225001 RAL-837 1410 chr3L 8295773 8295825 chr3L 8295951 8296003 15 174 4.5 5.5 5.0 2.5 230 chr3L 8295773 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8296003 intergenic not near genes chr3L_15_8295001 chr3L_8295001 RAL-837 1411 chr3L 8319420 8319450 chr3L 8319516 8319516 11 91 7.0 3.0 5.0 1.8 96 chr3L 8319420 intergenic CG43059 - chr3L 8319468 intergenic not near genes chr3L 8319516 intergenic not near genes chr3L_11_8315001 chr3L_8315001 RAL-837 1412 chr3L 8319459 8319467 chr3L 8319514 8319563 4 86 5.5 2.5 4.0 0.8 104 chr3L 8319459 intergenic CG43059 - chr3L 8319511 intergenic not near genes chr3L 8319563 intergenic not near genes chr3L_4_8315001 chr3L_8315001 RAL-837 1413 chr3L 8443573 8443580 chr3L 8443648 8443682 5 91 3.0 3.5 3.2 1.2 109 chr3L 8443573 3` UTR CG6983 - chr3L 8443628 3` UTR CG6983 - chr3L 8443682 3` UTR CG6983 - chr3L_5_8440001 chr3L_8440001 RAL-837 1414 chr3L 8481777 8481796 chr3L 8490954 8490969 roo 5 9177 5.0 6.0 5.5 0.8 9192 chr3L 8481777 intron CG43163 - chr3L 8486373 intron CG43163 - chr3L 8490969 intron CG43163 - chr3L_5_8485001 chr3L_8485001 RAL-837 1415 chr3L 8497884 8497917 chr3L 8498010 8498043 9 125 3.5 4.0 3.8 1.9 159 chr3L 8497884 intron CG43163 - chr3L 8497964 intron CG43163 - chr3L 8498043 intron CG43163 - chr3L_9_8495001 chr3L_8495001 RAL-837 1416 chr3L 8540695 8540742 chr3L 8540792 8540839 15 95 6.5 5.0 5.8 2.2 144 chr3L 8540695 intergenic not near genes chr3L 8540767 intergenic not near genes chr3L 8540839 intergenic not near genes chr3L_15_8540001 chr3L_8540001 RAL-837 1417 chr3L 8576255 8576271 chr3L 8576369 8576383 5 114 4.5 2.5 3.5 1.1 128 chr3L 8576255 intergenic CG6638 - chr3L 8576319 intergenic CG6638 -,CG43078 + chr3L 8576383 intergenic CG6638 -,CG43078 + chr3L_5_8575001 chr3L_8575001 RAL-837 1418 chr3L 8609063 8609112 chr3L 8609164 8609213 17 96 3.5 3.5 3.5 3.8 150 chr3L 8609063 intron CG6282 + chr3L 8609138 intron CG6282 + chr3L 8609213 intron CG6282 + chr3L_17_8605001 chr3L_8605001 RAL-837 1419 chr3L 8619499 8619538 chr3L 8619597 8619611 11 102 5.5 2.0 3.8 2.3 112 chr3L 8619499 intergenic S-Lap1 +,S-Lap2 + chr3L 8619555 intergenic S-Lap1 +,S-Lap2 + chr3L 8619611 intergenic S-Lap1 +,S-Lap2 + chr3L_11_8615001 chr3L_8615001 RAL-837 1420 chr3L 8743205 8743225 chr3L 8743310 8743315 4 99 16.5 6.5 11.5 0.3 110 chr3L 8743205 intron Prm - chr3L 8743260 intron Prm - chr3L 8743315 intron Prm - chr3L_4_8740001 chr3L_8740001 RAL-837 1421 chr3L 8791255 8791296 chr3L 8796695 8796715 I-element 15 5436 5.0 9.5 7.2 1.8 5460 chr3L 8791255 exon Fhos + chr3L 8793985 intron Fhos + chr3L 8796715 intron Fhos + chr3L_15_8790001 chr3L_8790001 RAL-837 1422 chr3L 8832388 8832431 chr3L 8832501 8832523 5 102 4.0 3.0 3.5 1.1 135 chr3L 8832388 intron dally + chr3L 8832456 intron dally + chr3L 8832523 intron dally + chr3L_5_8830001 chr3L_8830001 RAL-837 1423 chr3L 8839720 8839733 chr3L 8839820 8839833 6 100 6.5 2.0 4.2 1.2 113 chr3L 8839720 intron dally + chr3L 8839776 intron dally + chr3L 8839833 intron dally + chr3L_6_8835001 chr3L_8835001 RAL-837 1424 chr3L 8861528 8861554 chr3L 8861626 8861665 10 102 1.5 6.5 4.0 2.0 137 chr3L 8861528 intron dally + chr3L 8861596 intron dally + chr3L 8861665 intron dally + chr3L_10_8860001 chr3L_8860001 RAL-837 1425 chr3L 8924414 8924463 chr3L 8924517 8924521 13 97 3.5 5.0 4.2 2.5 107 chr3L 8924414 intron Tsp66E + chr3L 8924468 intron Tsp66E + chr3L 8924521 intron Tsp66E + chr3L_13_8920001 chr3L_8920001 RAL-837 1426 chr3L 8928249 8928296 chr3L 8928345 8928387 10 95 3.5 1.5 2.5 2.9 138 chr3L 8928249 intron Tsp66E + chr3L 8928318 intron Tsp66E + chr3L 8928387 intron Tsp66E + chr3L_10_8925001 chr3L_8925001 RAL-837 1427 chr3L 8929388 8929406 chr3L 8929488 8929523 5 111 3.5 0.0 1.8 1.8 135 chr3L 8929388 intron Tsp66E + chr3L 8929456 intron Tsp66E + chr3L 8929523 intron Tsp66E + chr3L_5_8925001 chr3L_8925001 RAL-837 1428 chr3L 8953449 8953502 chr3L 8953552 8953605 9 99 5.5 3.0 4.2 1.7 156 chr3L 8953449 intron CG43783 - chr3L 8953527 intron CG43783 - chr3L 8953605 intron CG43783 - chr3L_9_8950001 chr3L_8950001 RAL-837 1429 chr3L 9008627 9008662 chr3L 9008730 9008765 11 98 4.5 5.0 4.8 1.9 138 chr3L 9008627 3` UTR CG5194 - chr3L 9008696 3` UTR CG5194 - chr3L 9008765 exon CG5194 - chr3L_11_9005001 chr3L_9005001 RAL-837 1430 chr3L 9008664 9008673 chr3L 9008724 9008758 7 83 4.0 4.0 4.0 1.4 94 chr3L 9008664 3` UTR CG5194 - chr3L 9008711 3` UTR CG5194 - chr3L 9008758 exon CG5194 - chr3L_7_9005001 chr3L_9005001 RAL-837 1431 chr3L 9010635 9010667 chr3L 9010731 9010745 6 90 7.5 4.0 5.8 0.9 110 chr3L 9010635 intergenic not near genes chr3L 9010690 intergenic not near genes chr3L 9010745 intergenic not near genes chr3L_6_9010001 chr3L_9010001 RAL-837 1432 chr3L 9010669 9010681 chr3L 9010727 9010777 8 87 4.0 3.5 3.8 1.7 108 chr3L 9010669 intergenic not near genes chr3L 9010723 intergenic not near genes chr3L 9010777 intergenic not near genes chr3L_8_9010001 chr3L_9010001 RAL-837 1433 chr3L 9024489 9024537 chr3L 9024589 9024637 11 99 2.5 4.0 3.2 2.6 148 chr3L 9024489 intergenic not near genes chr3L 9024563 intergenic not near genes chr3L 9024637 intergenic not near genes chr3L_11_9020001 chr3L_9020001 RAL-837 1434 chr3L 9028692 9028740 chr3L 9029075 9029123 9 380 1.5 5.0 3.2 2.1 431 chr3L 9028692 intergenic not near genes chr3L 9028908 intergenic not near genes chr3L 9029123 intergenic not near genes chr3L_9_9025001 chr3L_9025001 RAL-837 1435 chr3L 9076924 9076956 chr3L 9084504 9084536 412 8 7575 4.0 7.5 5.8 1.2 7612 chr3L 9076924 exon Tequila + chr3L 9080730 intron Tequila + chr3L 9084536 exon Tequila + chr3L_8_9080001 chr3L_9080001 RAL-837 1436 chr3L 9116196 9116236 chr3L 9116292 9116322 10 95 2.0 3.5 2.8 2.6 126 chr3L 9116196 intron bol - chr3L 9116259 intron bol - chr3L 9116322 intron bol - chr3L_10_9115001 chr3L_9115001 RAL-837 1437 chr3L 9130538 9130581 chr3L 9134319 9134332 412 6 3775 6.5 4.0 5.2 1.0 3794 chr3L 9130538 intergenic bol - chr3L 9132435 intergenic not near genes chr3L 9134332 intergenic Dhpr + chr3L_6_9130001 chr3L_9130001 RAL-837 1438 chr3L 9206364 9206370 chr3L 9206463 9206469 4 98 3.5 3.0 3.2 1.0 105 chr3L 9206364 intron Slc45-1 - chr3L 9206416 intron Slc45-1 - chr3L 9206469 intron Slc45-1 - chr3L_4_9205001 chr3L_9205001 RAL-837 1439 chr3L 9219243 9219248 chr3L 9219915 9219920 jockey 4 677 10.0 5.0 7.5 0.5 677 chr3L 9219243 intergenic not near genes chr3L 9219582 intergenic not near genes chr3L 9219920 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-837 1440 chr3L 9219250 9219263 chr3L 9219914 9219930 jockey 6 674 6.5 5.0 5.8 0.9 680 chr3L 9219250 intergenic not near genes chr3L 9219590 intergenic not near genes chr3L 9219930 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-837 1441 chr3L 9232859 9232902 chr3L 9232961 9232979 7 98 5.5 1.0 3.2 1.7 120 chr3L 9232859 intergenic not near genes chr3L 9232919 intergenic not near genes chr3L 9232979 intergenic not near genes chr3L_7_9230001 chr3L_9230001 RAL-837 1442 chr3L 9256634 9256666 chr3L 9256733 9256749 7 102 3.0 1.5 2.2 2.2 115 chr3L 9256634 intron GluRIB + chr3L 9256692 intron GluRIB + chr3L 9256749 intron GluRIB + chr3L_7_9255001 chr3L_9255001 RAL-837 1443 chr3L 9348468 9348473 chr3L 9348990 9348995 5 522 9.0 0.0 4.5 0.9 527 chr3L 9348468 intergenic PGRP-LC + chr3L 9348732 intergenic PGRP-LC + chr3L 9348995 intergenic not near genes chr3L_5_9345001 chr3L_9345001 RAL-837 1444 chr3L 9348474 9348483 chr3L 9348971 9349005 8 512 7.5 0.0 3.8 1.7 531 chr3L 9348474 intergenic PGRP-LC + chr3L 9348740 intergenic PGRP-LC + chr3L 9349005 intergenic not near genes chr3L_8_9345001 chr3L_9345001 RAL-837 1445 chr3L 9359573 9359614 chr3L 9359677 9359725 15 107 4.0 5.0 4.5 2.7 152 chr3L 9359573 3` UTR CG32039 + chr3L 9359649 3` UTR CG32039 + chr3L 9359725 3` UTR CG32039 + chr3L_15_9355001 chr3L_9355001 RAL-837 1446 chr3L 9443495 9443508 chr3L 9445306 9445316 S-element 4 1810 6.0 6.0 6.0 0.6 1821 chr3L 9443495 intron CG33926 + chr3L 9444406 intron CG33926 + chr3L 9445316 intron CG33926 + chr3L_4_9440001 chr3L_9440001 RAL-837 1447 chr3L 9443527 9443538 chr3L 9445300 9445349 S-element 6 1793 3.5 5.5 4.5 1.1 1822 chr3L 9443527 intron CG33926 + chr3L 9444438 intron CG33926 + chr3L 9445349 intron CG33926 + chr3L_6_9440001 chr3L_9440001 RAL-837 1448 chr3L 9498193 9498212 chr3L 9498290 9498309 4 92 7.0 2.5 4.8 0.7 116 chr3L 9498193 intron path - chr3L 9498251 intron path - chr3L 9498309 intron path - chr3L_4_9495001 chr3L_9495001 RAL-837 1449 chr3L 9498213 9498222 chr3L 9498289 9498319 5 92 4.5 2.5 3.5 1.1 106 chr3L 9498213 intron path - chr3L 9498266 intron path - chr3L 9498319 intron path - chr3L_5_9495001 chr3L_9495001 RAL-837 1450 chr3L 9501696 9501703 chr3L 9502202 9502209 roo 5 506 5.5 4.5 5.0 0.8 513 chr3L 9501696 intron path - chr3L 9501952 intron path - chr3L 9502209 intron path - chr3L_5_9500001 chr3L_9500001 RAL-837 1451 chr3L 9501709 9501734 chr3L 9502200 9502240 roo 12 504 0.5 4.5 2.5 3.4 531 chr3L 9501709 intron path - chr3L 9501974 intron path - chr3L 9502240 intron path - chr3L_12_9500001 chr3L_9500001 RAL-837 1452 chr3L 9526464 9526506 chr3L 9528164 9528206 Doc 7 1699 2.5 4.5 3.5 1.6 1742 chr3L 9526464 intergenic not near genes chr3L 9527335 intergenic not near genes chr3L 9528206 intergenic not near genes chr3L_7_9525001 chr3L_9525001 RAL-837 1453 chr3L 9533732 9533779 chr3L 9541312 9541312 412 5 7567 2.5 4.5 3.5 1.1 7580 chr3L 9533732 intergenic not near genes chr3L 9537522 intergenic not near genes chr3L 9541312 intergenic not near genes chr3L_5_9535001 chr3L_9535001 RAL-837 1454 chr3L 9571886 9571932 chr3L 9572254 9572275 jockey 4 362 2.0 4.0 3.0 1.0 389 chr3L 9571886 intron CG42673 + chr3L 9572080 intron CG42673 + chr3L 9572275 intron CG42673 + chr3L_4_9570001 chr3L_9570001 RAL-837 1455 chr3L 9575894 9575946 chr3L 9580987 9581045 jockey 7 5089 3.5 5.0 4.2 1.3 5151 chr3L 9575894 intron CG42673 + chr3L 9578470 intron CG42673 + chr3L 9581045 intron CG42673 + chr3L_7_9575001 chr3L_9575001 RAL-837 1456 chr3L 9629742 9629768 chr3L 9629815 9629823 10 88 3.0 3.0 3.0 2.5 81 chr3L 9629742 intron CG8336 + chr3L 9629782 intron CG8336 + chr3L 9629823 intron CG8336 + chr3L_10_9625001 chr3L_9625001 RAL-837 1457 chr3L 9639008 9639062 chr3L 9639113 9639167 16 102 0.0 3.0 1.5 6.4 159 chr3L 9639008 intron,3` UTR fry -,CG8329 + chr3L 9639088 intron fry - chr3L 9639167 intron fry - chr3L_16_9635001 chr3L_9635001 RAL-837 1458 chr3L 9733361 9733380 chr3L 9733460 9733479 7 99 3.5 4.0 3.8 1.5 118 chr3L 9733361 intron CG6749 - chr3L 9733420 intron CG6749 - chr3L 9733479 intron CG6749 - chr3L_7_9730001 chr3L_9730001 RAL-837 1459 chr3L 9829034 9829055 chr3L 9829136 9829157 5 99 6.0 4.5 5.2 0.8 123 chr3L 9829034 intron CG43897 + chr3L 9829096 intron CG43897 + chr3L 9829157 intron CG43897 + chr3L_5_9825001 chr3L_9825001 RAL-837 1460 chr3L 9829064 9829079 chr3L 9829133 9829147 4 69 2.5 4.5 3.5 0.9 83 chr3L 9829064 intron CG43897 + chr3L 9829106 intron CG43897 + chr3L 9829147 intron CG43897 + chr3L_4_9825001 chr3L_9825001 RAL-837 1461 chr3L 9918883 9918909 chr3L 9918974 9918994 5 98 1.5 2.0 1.8 1.8 111 chr3L 9918883 intron CG34356 + chr3L 9918938 intron CG34356 + chr3L 9918994 intron CG34356 + chr3L_5_9915001 chr3L_9915001 RAL-837 1462 chr3L 9929653 9929700 chr3L 9938453 9938473 roo 13 8788 3.5 7.0 5.2 2.1 8820 chr3L 9929653 intron CG34356 + chr3L 9934063 intron CG34356 + chr3L 9938473 intron CG34356 + chr3L_13_9930001 chr3L_9930001 RAL-837 1463 chr3L 9951185 9951230 chr3L 9951288 9951306 6 101 1.5 5.0 3.2 1.4 121 chr3L 9951185 intron CG34356 + chr3L 9951246 intron CG34356 + chr3L 9951306 intron CG34356 + chr3L_6_9950001 chr3L_9950001 RAL-837 1464 chr3L 10049538 10049571 chr3L 10049627 10049671 12 96 2.5 4.0 3.2 2.9 133 chr3L 10049538 intron dpr6 + chr3L 10049604 intron dpr6 + chr3L 10049671 intron dpr6 + chr3L_12_10045001 chr3L_10045001 RAL-837 1465 chr3L 10159320 10159352 chr3L 10159405 10159427 11 98 4.0 2.5 3.2 2.6 107 chr3L 10159320 intron dpr10 - chr3L 10159374 intron dpr10 - chr3L 10159427 intron dpr10 - chr3L_11_10155001 chr3L_10155001 RAL-837 1466 chr3L 10191277 10191318 chr3L 10191398 10191432 13 124 3.5 5.5 4.5 2.4 155 chr3L 10191277 exon ect - chr3L 10191354 intron ect - chr3L 10191432 intron ect - chr3L_13_10190001 chr3L_10190001 RAL-837 1467 chr3L 10308725 10308745 chr3L 10308816 10308842 5 96 3.5 4.0 3.8 1.0 117 chr3L 10308725 intergenic not near genes chr3L 10308784 intergenic not near genes chr3L 10308842 intergenic not near genes chr3L_5_10305001 chr3L_10305001 RAL-837 1468 chr3L 10308746 10308775 chr3L 10308814 10308827 5 77 1.5 3.0 2.2 1.6 81 chr3L 10308746 intergenic not near genes chr3L 10308786 intergenic not near genes chr3L 10308827 intergenic not near genes chr3L_5_10305001 chr3L_10305001 RAL-837 1469 chr3L 10348527 10348675 chr3L 10348624 10348812 18 121 0.5 0.5 0.5 12.0 285 chr3L 10348527 intron CR44327 + chr3L 10348670 intron CR44327 + chr3L 10348812 intron CR44327 + chr3L_18_10345001 chr3L_10345001 RAL-837 1470 chr3L 10414935 10414952 chr3L 10417327 10417344 Doc 5 2392 0.0 8.0 4.0 1.0 2409 chr3L 10414935 intergenic CG12362 + chr3L 10416140 intergenic not near genes chr3L 10417344 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-837 1471 chr3L 10414959 10414969 chr3L 10417310 10417361 Doc 6 2381 0.0 5.0 2.5 1.7 2402 chr3L 10414959 intergenic CG12362 + chr3L 10416160 intergenic not near genes chr3L 10417361 intergenic not near genes chr3L_6_10415001 chr3L_10415001 RAL-837 1472 chr3L 10417580 10417600 chr3L 10417643 10417681 7 85 3.0 4.0 3.5 1.6 101 chr3L 10417580 intergenic not near genes chr3L 10417630 intergenic not near genes chr3L 10417681 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-837 1473 chr3L 10473790 10473842 chr3L 10473886 10473948 4 101 4.5 0.5 2.5 1.1 158 chr3L 10473790 intergenic not near genes chr3L 10473869 intergenic not near genes chr3L 10473948 intergenic not near genes chr3L_4_10470001 chr3L_10470001 RAL-837 1474 chr3L 10536106 10536132 chr3L 10536203 10536211 4 92 6.0 5.0 5.5 0.6 105 chr3L 10536106 intron A2bp1 + chr3L 10536158 intron A2bp1 + chr3L 10536211 intron A2bp1 + chr3L_4_10535001 chr3L_10535001 RAL-837 1475 chr3L 10600438 10600474 chr3L 10600540 10600576 6 95 6.0 0.5 3.2 1.4 138 chr3L 10600438 intergenic not near genes chr3L 10600507 intergenic not near genes chr3L 10600576 intergenic not near genes chr3L_6_10600001 chr3L_10600001 RAL-837 1476 chr3L 10613158 10613200 chr3L 10613473 10613515 8 313 0.0 2.5 1.2 3.6 357 chr3L 10613158 intergenic not near genes chr3L 10613336 intergenic not near genes chr3L 10613515 intergenic not near genes chr3L_8_10610001 chr3L_10610001 RAL-837 1477 chr3L 10621825 10621873 chr3L 10621932 10621980 7 103 3.0 2.5 2.8 1.8 155 chr3L 10621825 intergenic not near genes chr3L 10621902 intergenic not near genes chr3L 10621980 intergenic not near genes chr3L_7_10620001 chr3L_10620001 RAL-837 1478 chr3L 10658058 10658208 chr3L 10658155 10658355 23 116 0.0 0.0 0.0 23.0 297 chr3L 10658058 intron CG32066 - chr3L 10658206 intron CG32066 - chr3L 10658355 intron CG32066 - chr3L_23_10655001 chr3L_10655001 RAL-837 1479 chr3L 10735818 10735828 chr3L 10735928 10735938 5 110 7.0 7.5 7.2 0.6 120 chr3L 10735818 intergenic not near genes chr3L 10735878 intergenic not near genes chr3L 10735938 intergenic not near genes chr3L_5_10735001 chr3L_10735001 RAL-837 1480 chr3L 10748254 10748272 chr3L 10748359 10748391 6 110 4.5 6.0 5.2 1.0 137 chr3L 10748254 intergenic not near genes chr3L 10748322 intergenic not near genes chr3L 10748391 intergenic not near genes chr3L_6_10745001 chr3L_10745001 RAL-837 1481 chr3L 10748274 10748288 chr3L 10748357 10748382 6 96 1.5 6.0 3.8 1.2 108 chr3L 10748274 intergenic not near genes chr3L 10748328 intergenic not near genes chr3L 10748382 intergenic not near genes chr3L_6_10745001 chr3L_10745001 RAL-837 1482 chr3L 10759358 10759412 chr3L 10759467 10759525 7 99 1.5 0.0 0.8 3.9 167 chr3L 10759358 intergenic not near genes chr3L 10759442 intergenic not near genes chr3L 10759525 intergenic not near genes chr3L_7_10755001 chr3L_10755001 RAL-837 1483 chr3L 10828104 10828153 chr3L 10828358 10828397 8 251 3.0 0.5 1.8 2.9 293 chr3L 10828104 intergenic not near genes chr3L 10828250 intergenic not near genes chr3L 10828397 intergenic not near genes chr3L_8_10825001 chr3L_10825001 RAL-837 1484 chr3L 10912508 10912535 chr3L 10912602 10912638 6 98 0.5 4.0 2.2 1.9 130 chr3L 10912508 intergenic not near genes chr3L 10912573 intergenic not near genes chr3L 10912638 intergenic not near genes chr3L_6_10910001 chr3L_10910001 RAL-837 1485 chr3L 11018567 11018578 chr3L 11018671 11018680 5 103 2.0 5.5 3.8 1.0 113 chr3L 11018567 intergenic not near genes chr3L 11018624 intergenic not near genes chr3L 11018680 intergenic not near genes chr3L_5_11015001 chr3L_11015001 RAL-837 1486 chr3L 11053641 11053644 chr3L 11053751 11053754 4 110 3.5 4.5 4.0 0.8 113 chr3L 11053641 intergenic CG7888 + chr3L 11053698 intergenic CG7888 + chr3L 11053754 intergenic CG7888 + chr3L_4_11050001 chr3L_11050001 RAL-837 1487 chr3L 11087057 11087083 chr3L 11088863 11088892 S-element 8 1806 2.0 7.0 4.5 1.5 1835 chr3L 11087057 intron JIL-1 - chr3L 11087974 intron JIL-1 - chr3L 11088892 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 RAL-837 1488 chr3L 11121591 11121593 chr3L 11123015 11123020 4 1414 13.5 24.0 18.8 0.2 1429 chr3L 11121591 exon mRpL2 + chr3L 11122306 exon Ufd1-like - chr3L 11123020 exon Ufd1-like - chr3L_4_11120001 chr3L_11120001 RAL-837 1489 chr3L 11135513 11135805 chr3L 11135763 11135878 15 147 1.0 0.5 0.8 8.3 365 chr3L 11135513 intergenic CG14143 + chr3L 11135696 intergenic CG14143 +,CG32082 + chr3L 11135878 intergenic CG32082 +,CG14143 + chr3L_15_11135001 chr3L_11135001 RAL-837 1490 chr3L 11218473 11218523 chr3L 11218652 11218702 22 177 8.0 5.5 6.8 2.8 229 chr3L 11218473 intron CG42671 + chr3L 11218588 intron CG42671 + chr3L 11218702 intron CG42671 + chr3L_22_11215001 chr3L_11215001 RAL-837 1491 chr3L 11241773 11241786 chr3L 11241875 11241888 7 101 7.0 4.0 5.5 1.1 115 chr3L 11241773 intergenic not near genes chr3L 11241830 intergenic not near genes chr3L 11241888 intergenic not near genes chr3L_7_11240001 chr3L_11240001 RAL-837 1492 chr3L 11264451 11264494 chr3L 11271423 11271466 17.6 6 6972 4.0 5.0 4.5 1.1 7015 chr3L 11264451 intergenic not near genes chr3L 11267958 intergenic not near genes chr3L 11271466 intergenic not near genes chr3L_6_11265001 chr3L_11265001 RAL-837 1493 chr3L 11290614 11290639 chr3L 11290950 11290982 7 342 4.0 3.0 3.5 1.6 368 chr3L 11290614 intron CG6175 - chr3L 11290798 intron CG6175 - chr3L 11290982 intron CG6175 - chr3L_7_11290001 chr3L_11290001 RAL-837 1494 chr3L 11290640 11290657 chr3L 11290947 11291000 8 334 2.0 2.0 2.0 2.7 360 chr3L 11290640 intron CG6175 - chr3L 11290820 intron CG6175 - chr3L 11291000 intron CG6175 - chr3L_8_11290001 chr3L_11290001 RAL-837 1495 chr3L 11329678 11329726 chr3L 11332903 11332930 jockey 7 3215 2.0 4.5 3.2 1.7 3252 chr3L 11329678 intergenic not near genes chr3L 11331304 intergenic not near genes chr3L 11332930 intergenic not near genes chr3L_7_11330001 chr3L_11330001 RAL-837 1496 chr3L 11385584 11385610 chr3L 11385849 11385875 5 263 3.0 1.0 2.0 1.7 291 chr3L 11385584 intergenic not near genes chr3L 11385730 intergenic not near genes chr3L 11385875 intergenic not near genes chr3L_5_11385001 chr3L_11385001 RAL-837 1497 chr3L 11385612 11385627 chr3L 11385841 11385892 7 248 2.0 0.5 1.2 3.2 280 chr3L 11385612 intergenic not near genes chr3L 11385752 intergenic not near genes chr3L 11385892 intergenic not near genes chr3L_7_11385001 chr3L_11385001 RAL-837 1498 chr3L 11452835 11452846 chr3L 11453004 11453035 5 179 0.0 4.5 2.2 1.6 200 chr3L 11452835 intergenic not near genes chr3L 11452935 intergenic not near genes chr3L 11453035 intergenic not near genes chr3L_5_11450001 chr3L_11450001 RAL-837 1499 chr3L 11487663 11487679 chr3L 11487790 11487806 6 126 3.5 7.5 5.5 0.9 143 chr3L 11487663 5` UTR chrb + chr3L 11487734 5` UTR chrb + chr3L 11487806 5` UTR chrb + chr3L_6_11485001 chr3L_11485001 RAL-837 1500 chr3L 11560780 11560788 chr3L 11560872 11560886 7 95 6.0 7.0 6.5 0.9 106 chr3L 11560780 intron Mob2 - chr3L 11560833 intron Mob2 - chr3L 11560886 intron Mob2 - chr3L_7_11560001 chr3L_11560001 RAL-837 1501 chr3L 11560789 11560802 chr3L 11560866 11560900 9 92 3.0 4.0 3.5 2.0 111 chr3L 11560789 intron Mob2 - chr3L 11560844 intron Mob2 - chr3L 11560900 intron Mob2 - chr3L_9_11560001 chr3L_11560001 RAL-837 1502 chr3L 11579547 11579585 chr3L 11579673 11579701 14 124 2.5 3.0 2.8 3.7 154 chr3L 11579547 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579701 intergenic CG43390 - chr3L_14_11575001 chr3L_11575001 RAL-837 1503 chr3L 11590257 11590266 chr3L 11590367 11590376 4 110 3.5 2.5 3.0 1.0 119 chr3L 11590257 intergenic CG7377 + chr3L 11590316 intergenic CG7377 + chr3L 11590376 intergenic CG7377 +,CG33268 - chr3L_4_11590001 chr3L_11590001 RAL-837 1504 chr3L 11622520 11622563 chr3L 11622663 11622680 12 136 4.0 3.5 3.8 2.5 160 chr3L 11622520 intron CG6084 - chr3L 11622600 intron CG6084 - chr3L 11622680 intron CG6084 - chr3L_12_11620001 chr3L_11620001 RAL-837 1505 chr3L 11678093 11678118 chr3L 11678185 11678222 7 103 1.0 2.5 1.8 2.5 129 chr3L 11678093 intron CG32085 - chr3L 11678158 intron CG32085 - chr3L 11678222 intron CG32085 - chr3L_7_11675001 chr3L_11675001 RAL-837 1506 chr3L 11723072 11723115 chr3L 11727882 11727930 Doc 15 4811 3.5 5.5 4.5 2.7 4858 chr3L 11723072 3` UTR Bmcp + chr3L 11725501 intron Bmcp + chr3L 11727930 3` UTR Bmcp + chr3L_15_11725001 chr3L_11725001 RAL-837 1507 chr3L 11744009 11744017 chr3L 11744124 11744145 4 124 7.0 1.5 4.2 0.8 136 chr3L 11744009 exon CG6024 - chr3L 11744077 intron CG6024 - chr3L 11744145 intron CG6024 - chr3L_4_11740001 chr3L_11740001 RAL-837 1508 chr3L 11744018 11744041 chr3L 11744121 11744139 5 108 4.0 1.5 2.8 1.3 121 chr3L 11744018 exon CG6024 - chr3L 11744078 intron CG6024 - chr3L 11744139 intron CG6024 - chr3L_5_11740001 chr3L_11740001 RAL-837 1509 chr3L 9313026 9313027 chr3L 11777678 11777678 7 2464651 8.0 7.0 7.5 0.8 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_10545001 chr3L_10545001 RAL-837 1510 chr3L 11810538 11810555 chr3L 11810636 11810653 7 95 0.0 3.5 1.8 2.5 115 chr3L 11810538 intron CG42255 - chr3L 11810596 intron CG42255 - chr3L 11810653 exon CG42255 - chr3L_7_11810001 chr3L_11810001 RAL-837 1511 chr3L 11811437 11811486 chr3L 11811535 11811584 14 96 5.5 4.0 4.8 2.4 147 chr3L 11811437 intron CG42255 - chr3L 11811510 intron CG42255 - chr3L 11811584 exon CG42255 - chr3L_14_11810001 chr3L_11810001 RAL-837 1512 chr3L 11846395 11846418 chr3L 11846523 11846546 6 128 0.0 3.0 1.5 2.4 151 chr3L 11846395 intergenic not near genes chr3L 11846470 intergenic not near genes chr3L 11846546 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RAL-837 1513 chr3L 11849314 11849351 chr3L 11849434 11849471 10 119 3.0 2.5 2.8 2.6 157 chr3L 11849314 intergenic not near genes chr3L 11849392 intergenic not near genes chr3L 11849471 intergenic not near genes chr3L_10_11845001 chr3L_11845001 RAL-837 1514 chr3L 11864544 11864579 chr3L 11865855 11865866 pogo 5 1301 3.0 8.0 5.5 0.8 1322 chr3L 11864544 intron CG44837 - chr3L 11865205 intron CG44837 - chr3L 11865866 intron CG44837 - chr3L_5_11865001 chr3L_11865001 RAL-837 1515 chr3L 11871346 11871363 chr3L 11871445 11871462 5 98 0.5 3.0 1.8 1.8 116 chr3L 11871346 intron CG44837 - chr3L 11871404 intron CG44837 - chr3L 11871462 intron CG44837 - chr3L_5_11870001 chr3L_11870001 RAL-837 1516 chr3L 11877293 11877323 chr3L 11877394 11877424 10 100 5.0 5.0 5.0 1.7 131 chr3L 11877293 intron CG44837 - chr3L 11877358 intron CG44837 - chr3L 11877424 intron CG44837 - chr3L_10_11875001 chr3L_11875001 RAL-837 1517 chr3L 11943499 11943521 chr3L 11943595 11943642 8 113 4.5 5.5 5.0 1.3 143 chr3L 11943499 intergenic Rpt4R +,CG5883 - chr3L 11943570 intergenic CG5883 -,Rpt4R + chr3L 11943642 3` UTR CG5883 - chr3L_8_11940001 chr3L_11940001 RAL-837 1518 chr3L 12013893 12013937 chr3L 12014004 12014026 10 106 4.0 4.0 4.0 2.0 133 chr3L 12013893 intron rols - chr3L 12013960 intron rols - chr3L 12014026 intron rols - chr3L_10_12010001 chr3L_12010001 RAL-837 1519 chr3L 12052694 12052721 chr3L 12052793 12052836 9 111 3.5 2.0 2.8 2.4 142 chr3L 12052694 intron rols - chr3L 12052765 intron rols - chr3L 12052836 intron rols - chr3L_9_12050001 chr3L_12050001 RAL-837 1520 chr3L 12089064 12089080 chr3L 12089164 12089175 8 97 7.0 3.0 5.0 1.3 111 chr3L 12089064 exon CG17154 + chr3L 12089120 3` UTR CG17154 + chr3L 12089175 3` UTR CG17154 + chr3L_8_12085001 chr3L_12085001 RAL-837 1521 chr3L 12089081 12089110 chr3L 12089160 12089186 7 91 4.0 2.0 3.0 1.8 105 chr3L 12089081 3` UTR CG17154 + chr3L 12089134 3` UTR CG17154 + chr3L 12089186 3` UTR CG17154 + chr3L_7_12085001 chr3L_12085001 RAL-837 1522 chr3L 12092380 12092389 chr3L 12092477 12092486 6 97 5.0 3.0 4.0 1.2 106 chr3L 12092380 intergenic not near genes chr3L 12092433 intergenic not near genes chr3L 12092486 intergenic not near genes chr3L_6_12090001 chr3L_12090001 RAL-837 1523 chr3L 12270027 12270082 chr3L 12270131 12270186 12 103 3.5 2.0 2.8 3.2 159 chr3L 12270027 3` UTR Pbgs - chr3L 12270106 3` UTR Pbgs - chr3L 12270186 3` UTR Pbgs - chr3L_12_12270001 chr3L_12270001 RAL-837 1524 chr3L 12283581 12283588 chr3L 12283660 12283663 4 80 1.0 10.0 5.5 0.6 82 chr3L 12283581 intergenic not near genes chr3L 12283622 intergenic not near genes chr3L 12283663 intergenic not near genes chr3L_4_12280001 chr3L_12280001 RAL-837 1525 chr3L 12314772 12314798 chr3L 12314951 12314952 5 174 6.0 3.0 4.5 0.9 180 chr3L 12314772 intergenic not near genes chr3L 12314862 intergenic not near genes chr3L 12314952 intergenic not near genes chr3L_5_12310001 chr3L_12310001 RAL-837 1526 chr3L 12317399 12317634 chr3L 12317520 12317739 13 107 5.5 4.0 4.8 2.2 340 chr3L 12317399 intergenic not near genes chr3L 12317569 intergenic not near genes chr3L 12317739 intergenic not near genes chr3L_13_12315001 chr3L_12315001 RAL-837 1527 chr3L 12335391 12335399 chr3L 12335478 12335478 4 86 4.0 3.5 3.8 0.8 87 chr3L 12335391 exon CG32105 + chr3L 12335434 3` UTR CG32105 + chr3L 12335478 3` UTR CG32105 + chr3L_4_12335001 chr3L_12335001 RAL-837 1528 chr3L 12357710 12357738 chr3L 12357809 12357837 5 97 3.0 3.0 3.0 1.2 127 chr3L 12357710 intergenic not near genes chr3L 12357774 intergenic not near genes chr3L 12357837 intergenic not near genes chr3L_5_12355001 chr3L_12355001 RAL-837 1529 chr3L 12476270 12476322 chr3L 12476366 12476418 12 93 3.5 4.0 3.8 2.5 148 chr3L 12476270 intron CG10663 - chr3L 12476344 intron CG10663 - chr3L 12476418 intron CG10663 - chr3L_12_12475001 chr3L_12475001 RAL-837 1530 chr3L 12509762 12509800 chr3L 12509854 12509891 9 83 4.0 3.5 3.8 1.9 129 chr3L 12509762 exon sti - chr3L 12509826 exon sti - chr3L 12509891 exon sti - chr3L_9_12505001 chr3L_12505001 RAL-837 1531 chr3L 12614582 12614597 chr3L 12614740 12614750 5 157 0.0 5.0 2.5 1.4 168 chr3L 12614582 intron caup + chr3L 12614666 intron caup + chr3L 12614750 intron caup + chr3L_5_12610001 chr3L_12610001 RAL-837 1532 chr3L 12626133 12626165 chr3L 12626262 12626294 8 129 7.0 1.0 4.0 1.6 161 chr3L 12626133 intergenic not near genes chr3L 12626214 intergenic not near genes chr3L 12626294 intergenic not near genes chr3L_8_12625001 chr3L_12625001 RAL-837 1533 chr3L 12656750 12656800 chr3L 12656876 12656926 8 120 3.5 1.5 2.5 2.3 176 chr3L 12656750 intergenic not near genes chr3L 12656838 intergenic not near genes chr3L 12656926 intergenic not near genes chr3L_8_12655001 chr3L_12655001 RAL-837 1534 chr3L 12857980 12858005 chr3L 12858089 12858120 10 111 2.5 3.0 2.8 2.6 140 chr3L 12857980 3` UTR CG32107 - chr3L 12858050 3` UTR CG32107 - chr3L 12858120 3` UTR CG32107 - chr3L_10_12855001 chr3L_12855001 RAL-837 1535 chr3L 12869710 12869753 chr3L 12869982 12870025 9 270 2.5 3.5 3.0 2.2 315 chr3L 12869710 intergenic not near genes chr3L 12869868 intergenic not near genes chr3L 12870025 intergenic not near genes chr3L_9_12865001 chr3L_12865001 RAL-837 1536 chr3L 12874918 12874945 chr3L 12877230 12877257 jockey 11 2311 4.0 8.5 6.2 1.5 2339 chr3L 12874918 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877257 intergenic not near genes chr3L_11_12875001 chr3L_12875001 RAL-837 1537 chr3L 12878493 12878536 chr3L 12878613 12878656 8 126 26.5 30.5 28.5 0.3 163 chr3L 12878493 intergenic not near genes chr3L 12878574 intergenic not near genes chr3L 12878656 intergenic not near genes chr3L_8_12875001 chr3L_12875001 RAL-837 1538 chr3L 12929712 12929742 chr3L 12930048 12930078 7 336 0.0 2.5 1.2 3.2 366 chr3L 12929712 intergenic not near genes chr3L 12929895 intergenic not near genes chr3L 12930078 intergenic not near genes chr3L_7_12925001 chr3L_12925001 RAL-837 1539 chr3L 12957767 12957815 chr3L 12962269 12962317 copia 15 4500 5.5 4.0 4.8 2.6 4550 chr3L 12957767 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962317 intergenic not near genes chr3L_15_12960001 chr3L_12960001 RAL-837 1540 chr3L 12966120 12966161 chr3L 12966229 12966270 7 106 4.0 2.0 3.0 1.8 150 chr3L 12966120 intron Or69a - chr3L 12966195 intron Or69a - chr3L 12966270 intron Or69a - chr3L_7_12965001 chr3L_12965001 RAL-837 1541 chr3L 12978741 12978782 chr3L 12978835 12978846 6 84 5.0 0.5 2.8 1.6 105 chr3L 12978741 intergenic not near genes chr3L 12978794 intergenic not near genes chr3L 12978846 intergenic not near genes chr3L_6_12975001 chr3L_12975001 RAL-837 1542 chr3L 12980501 12980551 chr3L 12980609 12980664 14 108 3.0 0.0 1.5 5.6 163 chr3L 12980501 intergenic not near genes chr3L 12980582 intergenic not near genes chr3L 12980664 intergenic not near genes chr3L_14_12980001 chr3L_12980001 RAL-837 1543 chr3L 13004360 13004380 chr3L 13004472 13004507 4 123 3.0 3.0 3.0 1.0 147 chr3L 13004360 intergenic not near genes chr3L 13004434 intergenic not near genes chr3L 13004507 intergenic not near genes chr3L_4_13000001 chr3L_13000001 RAL-837 1544 chr3L 13069542 13069558 chr3L 13069641 13069657 4 99 5.5 2.5 4.0 0.8 115 chr3L 13069542 intergenic not near genes chr3L 13069600 intergenic not near genes chr3L 13069657 intergenic not near genes chr3L_4_13065001 chr3L_13065001 RAL-837 1545 chr3L 13069559 13069587 chr3L 13069640 13069686 11 96 3.0 2.5 2.8 2.9 127 chr3L 13069559 intergenic not near genes chr3L 13069622 intergenic not near genes chr3L 13069686 intergenic not near genes chr3L_11_13065001 chr3L_13065001 RAL-837 1546 chr3L 13085048 13085078 chr3L 13085147 13085151 8 94 3.0 7.0 5.0 1.3 103 chr3L 13085048 intergenic not near genes chr3L 13085100 intergenic not near genes chr3L 13085151 intergenic not near genes chr3L_8_13085001 chr3L_13085001 RAL-837 1547 chr3L 13123139 13123190 chr3L 13123249 13123288 14 108 2.0 4.5 3.2 3.3 149 chr3L 13123139 intergenic not near genes chr3L 13123214 intergenic not near genes chr3L 13123288 intergenic not near genes chr3L_14_13120001 chr3L_13120001 RAL-837 1548 chr3L 13159274 13159295 chr3L 13159373 13159394 7 98 3.0 3.0 3.0 1.8 120 chr3L 13159274 intergenic not near genes chr3L 13159334 intergenic not near genes chr3L 13159394 intergenic not near genes chr3L_7_13155001 chr3L_13155001 RAL-837 1549 chr3L 13161757 13161788 chr3L 13161853 13161884 12 96 1.0 2.5 1.8 4.3 127 chr3L 13161757 intergenic not near genes chr3L 13161820 intergenic not near genes chr3L 13161884 intergenic not near genes chr3L_12_13160001 chr3L_13160001 RAL-837 1550 chr3L 13174243 13174273 chr3L 13174355 13174365 13 109 3.5 6.5 5.0 2.2 122 chr3L 13174243 intergenic snky + chr3L 13174304 intergenic snky + chr3L 13174365 intergenic snky + chr3L_13_13170001 chr3L_13170001 RAL-837 1551 chr3L 13182429 13182466 chr3L 13182527 13182564 6 94 1.0 0.5 0.8 3.3 135 chr3L 13182429 intergenic not near genes chr3L 13182496 intergenic not near genes chr3L 13182564 intergenic not near genes chr3L_6_13180001 chr3L_13180001 RAL-837 1552 chr3L 13206245 13206260 chr3L 13206320 13206362 6 92 2.5 3.0 2.8 1.6 117 chr3L 13206245 intergenic not near genes chr3L 13206304 intergenic not near genes chr3L 13206362 intergenic not near genes chr3L_6_13205001 chr3L_13205001 RAL-837 1553 chr3L 13221691 13221735 chr3L 13222054 13222086 14 362 5.5 5.0 5.2 2.3 395 chr3L 13221691 intergenic not near genes chr3L 13221888 intergenic not near genes chr3L 13222086 intergenic not near genes chr3L_14_13220001 chr3L_13220001 RAL-837 1554 chr3L 13235740 13235775 chr3L 13235831 13235859 9 96 5.0 3.0 4.0 1.8 119 chr3L 13235740 intron caps + chr3L 13235800 intron caps + chr3L 13235859 intron caps + chr3L_9_13235001 chr3L_13235001 RAL-837 1555 chr3L 13261799 13261837 chr3L 13261909 13261947 11 108 1.5 4.0 2.8 2.9 148 chr3L 13261799 intron caps + chr3L 13261873 intron caps + chr3L 13261947 intron caps + chr3L_11_13260001 chr3L_13260001 RAL-837 1556 chr3L 13272038 13272079 chr3L 13272147 13272198 6 110 2.5 2.0 2.2 1.9 160 chr3L 13272038 intron caps + chr3L 13272118 intron caps + chr3L 13272198 intron caps + chr3L_6_13270001 chr3L_13270001 RAL-837 1557 chr3L 13311034 13311047 chr3L 13311100 13311143 7 74 2.0 3.0 2.5 2.0 109 chr3L 13311034 intergenic not near genes chr3L 13311088 intergenic not near genes chr3L 13311143 intergenic not near genes chr3L_7_13310001 chr3L_13310001 RAL-837 1558 chr3L 13315845 13315853 chr3L 13315944 13315950 4 102 3.5 0.0 1.8 1.4 105 chr3L 13315845 intergenic not near genes chr3L 13315898 intergenic not near genes chr3L 13315950 intergenic not near genes chr3L_4_13315001 chr3L_13315001 RAL-837 1559 chr3L 13374231 13374250 chr3L 13374336 13374359 8 106 8.0 3.5 5.8 1.2 128 chr3L 13374231 intergenic not near genes chr3L 13374295 intergenic not near genes chr3L 13374359 intergenic not near genes chr3L_8_13370001 chr3L_13370001 RAL-837 1560 chr3L 13374253 13374278 chr3L 13374332 13374387 8 105 3.0 3.5 3.2 1.9 134 chr3L 13374253 intergenic not near genes chr3L 13374320 intergenic not near genes chr3L 13374387 intergenic not near genes chr3L_8_13370001 chr3L_13370001 RAL-837 1561 chr3L 13375397 13375417 chr3L 13375527 13375547 4 130 5.5 1.5 3.5 0.9 150 chr3L 13375397 intergenic not near genes chr3L 13375472 intergenic not near genes chr3L 13375547 intergenic not near genes chr3L_4_13375001 chr3L_13375001 RAL-837 1562 chr3L 13375433 13375444 chr3L 13375523 13375574 4 116 2.5 1.5 2.0 1.3 141 chr3L 13375433 intergenic not near genes chr3L 13375504 intergenic not near genes chr3L 13375574 intergenic not near genes chr3L_4_13375001 chr3L_13375001 RAL-837 1563 chr3L 13477009 13477036 chr3L 13477089 13477133 12 93 0.0 1.5 0.8 6.7 124 chr3L 13477009 intergenic not near genes chr3L 13477071 intergenic stv + chr3L 13477133 intergenic stv + chr3L_12_13475001 chr3L_13475001 RAL-837 1564 chr3L 13525172 13525186 chr3L 13532951 13532955 roo 8 7787 4.0 6.0 5.0 1.3 7783 chr3L 13525172 intergenic not near genes chr3L 13529064 intergenic not near genes chr3L 13532955 intergenic not near genes chr3L_8_13525001 chr3L_13525001 RAL-837 1565 chr3L 13557652 13557701 chr3L 13558007 13558018 13 342 2.0 3.0 2.5 3.7 366 chr3L 13557652 intron bru-3 - chr3L 13557835 intron,5` UTR bru-3 -,CR45178 + chr3L 13558018 intron,5` UTR bru-3 -,CR45178 + chr3L_13_13555001 chr3L_13555001 RAL-837 1566 chr3L 13596018 13596064 chr3L 13596153 13596199 8 131 4.5 1.0 2.8 2.1 181 chr3L 13596018 intron bru-3 - chr3L 13596108 intron bru-3 - chr3L 13596199 intron bru-3 - chr3L_8_13595001 chr3L_13595001 RAL-837 1567 chr3L 13605352 13605370 chr3L 13605419 13605443 6 80 2.0 3.5 2.8 1.6 91 chr3L 13605352 intron bru-3 - chr3L 13605398 intron bru-3 - chr3L 13605443 intron bru-3 - chr3L_6_13605001 chr3L_13605001 RAL-837 1568 chr3L 13629508 13629549 chr3L 13629639 13629659 8 122 2.5 6.0 4.2 1.5 151 chr3L 13629508 intron bru-3 - chr3L 13629584 intron bru-3 - chr3L 13629659 intron bru-3 - chr3L_8_13625001 chr3L_13625001 RAL-837 1569 chr3L 13677508 13677557 chr3L 13677605 13677654 21 96 5.5 3.5 4.5 3.8 146 chr3L 13677508 intron bru-3 - chr3L 13677581 intron bru-3 - chr3L 13677654 intron bru-3 - chr3L_21_13675001 chr3L_13675001 RAL-837 1570 chr3L 13703452 13703466 chr3L 13703517 13703549 5 89 1.5 2.0 1.8 1.8 97 chr3L 13703452 intron bru-3 - chr3L 13703500 intron bru-3 - chr3L 13703549 intron bru-3 - chr3L_5_13700001 chr3L_13700001 RAL-837 1571 chr3L 13740022 13740052 chr3L 13740135 13740165 11 110 2.5 6.0 4.2 2.1 143 chr3L 13740022 intron bru-3 - chr3L 13740094 intron bru-3 - chr3L 13740165 intron bru-3 - chr3L_11_13740001 chr3L_13740001 RAL-837 1572 chr3L 13804523 13804565 chr3L 13822829 13822871 roo 11 18299 3.0 1.5 2.2 3.4 18348 chr3L 13804523 intergenic not near genes chr3L 13813697 intergenic not near genes chr3L 13822871 intergenic not near genes chr3L_11_13810001 chr3L_13810001 RAL-837 1573 chr3L 13841503 13841524 chr3L 13841606 13841618 4 101 5.0 2.5 3.8 0.8 115 chr3L 13841503 exon CG8757 - chr3L 13841560 intron CG8757 - chr3L 13841618 intron CG8757 - chr3L_4_13840001 chr3L_13840001 RAL-837 1574 chr3L 13884359 13884387 chr3L 13884470 13884498 6 111 4.5 3.0 3.8 1.2 139 chr3L 13884359 intron dysc - chr3L 13884428 intron dysc - chr3L 13884498 intron dysc - chr3L_6_13880001 chr3L_13880001 RAL-837 1575 chr3L 13920407 13920432 chr3L 13920507 13920514 7 96 0.5 4.0 2.2 2.2 107 chr3L 13920407 intron Rgl - chr3L 13920460 intron Rgl - chr3L 13920514 intron Rgl - chr3L_7_13920001 chr3L_13920001 RAL-837 1576 chr3L 13931312 13931370 chr3L 13931437 13931495 10 120 0.5 2.5 1.5 4.0 183 chr3L 13931312 intron Gl + chr3L 13931404 intron Gl + chr3L 13931495 intron Gl + chr3L_10_13930001 chr3L_13930001 RAL-837 1577 chr3L 13936483 13936648 chr3L 13936571 13936802 5 140 1.5 3.0 2.2 1.6 319 chr3L 13936483 intergenic not near genes chr3L 13936642 intergenic not near genes chr3L 13936802 intergenic not near genes chr3L_5_13935001 chr3L_13935001 RAL-837 1578 chr3L 14076059 14076101 chr3L 14076154 14076200 10 96 1.0 2.0 1.5 4.0 141 chr3L 14076059 3` UTR,intron Pex1 +,btl + chr3L 14076130 intron btl + chr3L 14076200 intron btl + chr3L_10_14075001 chr3L_14075001 RAL-837 1579 chr3L 14092725 14092753 chr3L 14092828 14092845 6 100 3.5 0.5 2.0 2.0 120 chr3L 14092725 intergenic not near genes chr3L 14092785 intergenic not near genes chr3L 14092845 intergenic not near genes chr3L_6_14090001 chr3L_14090001 RAL-837 1580 chr3L 14132002 14132017 chr3L 14132104 14132119 4 102 4.0 3.0 3.5 0.9 117 chr3L 14132002 intergenic not near genes chr3L 14132060 intergenic not near genes chr3L 14132119 intergenic not near genes chr3L_4_14130001 chr3L_14130001 RAL-837 1581 chr3L 14141395 14141409 chr3L 14141497 14141516 4 106 1.0 0.0 0.5 2.7 121 chr3L 14141395 intergenic not near genes chr3L 14141456 intergenic not near genes chr3L 14141516 intergenic not near genes chr3L_4_14140001 chr3L_14140001 RAL-837 1582 chr3L 14185142 14185164 chr3L 14185238 14185243 5 93 7.5 2.5 5.0 0.8 101 chr3L 14185142 intergenic not near genes chr3L 14185192 intergenic not near genes chr3L 14185243 intergenic not near genes chr3L_5_14185001 chr3L_14185001 RAL-837 1583 chr3L 14185175 14185186 chr3L 14185234 14185282 5 87 4.5 3.5 4.0 1.0 107 chr3L 14185175 intergenic not near genes chr3L 14185228 intergenic not near genes chr3L 14185282 intergenic not near genes chr3L_5_14185001 chr3L_14185001 RAL-837 1584 chr3L 14194706 14194737 chr3L 14194801 14194833 10 91 6.5 3.5 5.0 1.7 127 chr3L 14194706 intron nuf + chr3L 14194770 intron nuf + chr3L 14194833 intron nuf + chr3L_10_14190001 chr3L_14190001 RAL-837 1585 chr3L 14239979 14240002 chr3L 14240091 14240119 4 111 1.5 2.0 1.8 1.4 140 chr3L 14239979 intergenic not near genes chr3L 14240049 intergenic not near genes chr3L 14240119 intergenic not near genes chr3L_4_14240001 chr3L_14240001 RAL-837 1586 chr3L 14245560 14245593 chr3L 14245674 14245680 1360 8 110 4.0 2.5 3.2 1.9 120 chr3L 14245560 3` UTR CR44561 - chr3L 14245620 3` UTR CR44561 - chr3L 14245680 3` UTR CR44561 - chr3L_8_14245001 chr3L_14245001 RAL-837 1587 chr3L 14267355 14267373 chr3L 14271815 14271833 F-element 7 4460 8.0 5.0 6.5 0.9 4478 chr3L 14267355 intergenic not near genes chr3L 14269594 intergenic not near genes chr3L 14271833 intergenic not near genes chr3L_7_14265001 chr3L_14265001 RAL-837 1588 chr3L 14267379 14267394 chr3L 14271806 14271834 F-element 6 4436 4.5 2.5 3.5 1.3 4455 chr3L 14267379 intergenic not near genes chr3L 14269606 intergenic not near genes chr3L 14271834 intergenic not near genes chr3L_6_14265001 chr3L_14265001 RAL-837 1589 chr3L 14295964 14296014 chr3L 14296470 14296473 roo 8 493 1.0 4.0 2.5 2.3 509 chr3L 14295964 intron fz + chr3L 14296218 intron fz + chr3L 14296473 intron fz + chr3L_8_14295001 chr3L_14295001 RAL-837 1590 chr3L 14300175 14300214 chr3L 14300281 14300299 6 102 6.0 3.0 4.5 1.1 124 chr3L 14300175 intron fz + chr3L 14300237 intron fz + chr3L 14300299 intron fz + chr3L_6_14300001 chr3L_14300001 RAL-837 1591 chr3L 14312043 14312056 chr3L 14316841 14316890 X-element 4 4814 2.0 3.5 2.8 1.1 4847 chr3L 14312043 exon fz + chr3L 14314466 intron fz + chr3L 14316890 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-837 1592 chr3L 14326959 14326993 chr3L 14327115 14327149 12 155 3.5 6.5 5.0 2.0 190 chr3L 14326959 intron fz + chr3L 14327054 intron fz + chr3L 14327149 intron fz + chr3L_12_14325001 chr3L_14325001 RAL-837 1593 chr3L 14331442 14331468 chr3L 14331545 14331571 7 98 6.0 1.0 3.5 1.6 129 chr3L 14331442 intron fz + chr3L 14331506 intron fz + chr3L 14331571 intron fz + chr3L_7_14330001 chr3L_14330001 RAL-837 1594 chr3L 14331476 14331489 chr3L 14331544 14331582 5 82 3.5 1.0 2.2 1.6 106 chr3L 14331476 intron fz + chr3L 14331529 intron fz + chr3L 14331582 intron fz + chr3L_5_14330001 chr3L_14330001 RAL-837 1595 chr3L 14341420 14341436 chr3L 14341575 14341578 4 152 0.0 3.5 1.8 1.4 158 chr3L 14341420 intron fz + chr3L 14341499 intron fz + chr3L 14341578 intron fz + chr3L_4_14340001 chr3L_14340001 RAL-837 1596 chr3L 14356500 14356551 chr3L 14356600 14356649 12 96 1.0 2.5 1.8 4.3 149 chr3L 14356500 intron fz + chr3L 14356574 intron fz + chr3L 14356649 intron fz + chr3L_12_14355001 chr3L_14355001 RAL-837 1597 chr3L 14364395 14364429 chr3L 14364491 14364516 4 89 5.5 2.5 4.0 0.8 121 chr3L 14364395 intron fz + chr3L 14364456 intron fz + chr3L 14364516 intron fz + chr3L_4_14360001 chr3L_14360001 RAL-837 1598 chr3L 14462881 14462907 chr3L 14462989 14463005 6 106 0.0 3.0 1.5 2.4 124 chr3L 14462881 intron bbg - chr3L 14462943 intron bbg - chr3L 14463005 intron bbg - chr3L_6_14460001 chr3L_14460001 RAL-837 1599 chr3L 14468432 14468444 chr3L 14473658 14473664 copia 6 5224 12.0 6.5 9.2 0.6 5232 chr3L 14468432 intron bbg - chr3L 14471048 intron bbg - chr3L 14473664 intron bbg - chr3L_6_14470001 chr3L_14470001 RAL-837 1600 chr3L 14468445 14468470 chr3L 14473656 14473696 copia 8 5222 6.0 6.0 6.0 1.1 5251 chr3L 14468445 intron bbg - chr3L 14471070 intron bbg - chr3L 14473696 intron bbg - chr3L_8_14470001 chr3L_14470001 RAL-837 1601 chr3L 14485997 14486048 chr3L 14486098 14486114 11 90 2.5 2.5 2.5 3.1 117 chr3L 14485997 intron bbg - chr3L 14486056 intron bbg - chr3L 14486114 intron bbg - chr3L_11_14485001 chr3L_14485001 RAL-837 1602 chr3L 14522081 14522126 chr3L 14522200 14522244 10 116 3.5 2.5 3.0 2.5 163 chr3L 14522081 intron bbg - chr3L 14522162 intron bbg - chr3L 14522244 intron bbg - chr3L_10_14520001 chr3L_14520001 RAL-837 1603 chr3L 14524312 14524349 chr3L 14529094 14529123 F-element 8 4776 2.0 2.0 2.0 2.7 4811 chr3L 14524312 intron bbg - chr3L 14526718 intron bbg - chr3L 14529123 intron bbg - chr3L_8_14525001 chr3L_14525001 RAL-837 1604 chr3L 14531207 14531240 chr3L 14531330 14531363 5 120 0.5 5.5 3.0 1.2 156 chr3L 14531207 intron bbg - chr3L 14531285 intron bbg - chr3L 14531363 intron bbg - chr3L_5_14530001 chr3L_14530001 RAL-837 1605 chr3L 14584171 14584182 chr3L 14584278 14584289 4 104 0.0 10.0 5.0 0.7 118 chr3L 14584171 intron HGTX - chr3L 14584230 intron HGTX - chr3L 14584289 intron HGTX - chr3L_4_14580001 chr3L_14580001 RAL-837 1606 chr3L 14584183 14584185 chr3L 14584274 14584292 4 103 0.0 8.5 4.2 0.8 109 chr3L 14584183 intron HGTX - chr3L 14584238 intron HGTX - chr3L 14584292 intron HGTX - chr3L_4_14580001 chr3L_14580001 RAL-837 1607 chr3L 14692128 14692163 chr3L 14692278 14692310 10 157 5.0 2.5 3.8 2.1 182 chr3L 14692128 intron ome + chr3L 14692219 intron ome + chr3L 14692310 intron ome + chr3L_10_14690001 chr3L_14690001 RAL-837 1608 chr3L 14725599 14725620 chr3L 14728593 14728608 Doc 7 3003 4.5 4.0 4.2 1.3 3009 chr3L 14725599 intron ome + chr3L 14727104 intron ome + chr3L 14728608 intron ome + chr3L_7_14725001 chr3L_14725001 RAL-837 1609 chr3L 14844244 14844284 chr3L 14844355 14844355 11 104 2.0 3.0 2.5 3.1 111 chr3L 14844244 intron CG17839 + chr3L 14844300 intron CG17839 + chr3L 14844355 intron CG17839 + chr3L_11_14840001 chr3L_14840001 RAL-837 1610 chr3L 14912199 14912211 chr3L 14912274 14912296 7 94 2.5 2.5 2.5 2.0 97 chr3L 14912199 intron DCX-EMAP + chr3L 14912248 intron DCX-EMAP + chr3L 14912296 intron DCX-EMAP + chr3L_7_14910001 chr3L_14910001 RAL-837 1611 chr3L 14917644 14917690 chr3L 14917742 14917793 8 100 4.0 6.0 5.0 1.3 149 chr3L 14917644 intron DCX-EMAP + chr3L 14917718 intron DCX-EMAP + chr3L 14917793 intron DCX-EMAP + chr3L_8_14915001 chr3L_14915001 RAL-837 1612 chr3L 14959974 14959990 chr3L 14960078 14960094 7 104 6.5 5.0 5.8 1.0 120 chr3L 14959974 intergenic not near genes chr3L 14960034 intergenic not near genes chr3L 14960094 intergenic not near genes chr3L_7_14960001 chr3L_14960001 RAL-837 1613 chr3L 14959992 14960014 chr3L 14960076 14960115 6 96 1.5 5.0 3.2 1.4 123 chr3L 14959992 intergenic not near genes chr3L 14960054 intergenic not near genes chr3L 14960115 intergenic not near genes chr3L_6_14960001 chr3L_14960001 RAL-837 1614 chr3L 15035700 15035745 chr3L 15035805 15035830 9 101 2.0 3.0 2.5 2.6 130 chr3L 15035700 intron Sytbeta - chr3L 15035765 intron Sytbeta - chr3L 15035830 intron Sytbeta - chr3L_9_15035001 chr3L_15035001 RAL-837 1615 chr3L 15085033 15085076 chr3L 15086219 15086262 1360 12 1181 5.5 2.5 4.0 2.4 1229 chr3L 15085033 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086262 intron cp309 - chr3L_12_15085001 chr3L_15085001 RAL-837 1616 chr3L 15165028 15165036 chr3L 15165140 15165155 5 118 2.0 0.0 1.0 2.5 127 chr3L 15165028 intergenic not near genes chr3L 15165092 intergenic not near genes chr3L 15165155 intergenic not near genes chr3L_5_15165001 chr3L_15165001 RAL-837 1617 chr3L 15184941 15184975 chr3L 15185031 15185100 5 112 1.5 0.0 0.8 2.8 159 chr3L 15184941 intergenic not near genes chr3L 15185020 intergenic not near genes chr3L 15185100 intergenic not near genes chr3L_5_15185001 chr3L_15185001 RAL-837 1618 chr3L 15216638 15216665 chr3L 15216735 15216762 7 97 7.5 4.0 5.8 1.0 124 chr3L 15216638 intergenic not near genes chr3L 15216700 intergenic not near genes chr3L 15216762 intergenic not near genes chr3L_7_15215001 chr3L_15215001 RAL-837 1619 chr3L 15216668 15216682 chr3L 15216729 15216752 4 66 6.0 3.5 4.8 0.7 84 chr3L 15216668 intergenic not near genes chr3L 15216710 intergenic not near genes chr3L 15216752 intergenic not near genes chr3L_4_15215001 chr3L_15215001 RAL-837 1620 chr3L 15219726 15219773 chr3L 15219828 15219875 8 102 4.5 3.5 4.0 1.6 149 chr3L 15219726 intergenic not near genes chr3L 15219800 intergenic not near genes chr3L 15219875 intergenic not near genes chr3L_8_15215001 chr3L_15215001 RAL-837 1621 chr3L 5770756 5770757 chr3L 15253229 15253229 4 9482472 14.0 12.5 13.2 0.3 9482473 chr3L 5770756 intron scny + chr3L 10511992 intron A2bp1 + chr3L 15253229 intergenic not near genes chr3L_4_10510001 chr3L_10510001 RAL-837 1622 chr3L 15257412 15257443 chr3L 15257645 15257656 6 229 3.0 0.0 1.5 2.4 244 chr3L 15257412 intergenic not near genes chr3L 15257534 intergenic not near genes chr3L 15257656 intergenic not near genes chr3L_6_15255001 chr3L_15255001 RAL-837 1623 chr3L 15295771 15295799 chr3L 15298625 15298662 gypsy5 8 2862 4.5 10.0 7.2 1.0 2891 chr3L 15295771 intergenic not near genes chr3L 15297216 intergenic not near genes chr3L 15298662 intergenic Best4 + chr3L_8_15295001 chr3L_15295001 RAL-837 1624 chr3L 15405999 15406051 chr3L 15406101 15406154 6 102 2.5 3.0 2.8 1.6 155 chr3L 15405999 intergenic not near genes chr3L 15406076 intergenic not near genes chr3L 15406154 intergenic not near genes chr3L_6_15405001 chr3L_15405001 RAL-837 1625 chr3L 15408454 15408480 chr3L 15408559 15408590 7 107 4.0 2.0 3.0 1.8 136 chr3L 15408454 intergenic CG33259 + chr3L 15408522 intergenic CG33259 + chr3L 15408590 intergenic CG33259 + chr3L_7_15405001 chr3L_15405001 RAL-837 1626 chr3L 15423740 15423776 chr3L 15426604 15426640 opus 5 2864 3.0 4.0 3.5 1.1 2900 chr3L 15423740 intergenic not near genes chr3L 15425190 intergenic not near genes chr3L 15426640 intergenic not near genes chr3L_5_15425001 chr3L_15425001 RAL-837 1627 chr3L 15466031 15466129 chr3L 15466133 15466245 5 101 0.0 0.0 0.0 5.0 214 chr3L 15466031 intergenic not near genes chr3L 15466138 intergenic not near genes chr3L 15466245 intergenic not near genes chr3L_5_15465001 chr3L_15465001 RAL-837 1628 chr3L 15466528 15466548 chr3L 15466604 15466652 7 91 1.5 0.5 1.0 3.5 124 chr3L 15466528 intergenic not near genes chr3L 15466590 intergenic not near genes chr3L 15466652 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-837 1629 chr3L 15482301 15482350 chr3L 15482421 15482461 13 116 2.5 4.0 3.2 3.1 160 chr3L 15482301 intergenic not near genes chr3L 15482381 intergenic not near genes chr3L 15482461 intergenic not near genes chr3L_13_15480001 chr3L_15480001 RAL-837 1630 chr3L 15529864 15529880 chr3L 15529947 15529977 7 95 0.0 1.5 0.8 3.9 113 chr3L 15529864 intergenic CG43248 - chr3L 15529920 intergenic CG43248 - chr3L 15529977 intergenic CG43248 - chr3L_7_15525001 chr3L_15525001 RAL-837 1631 chr3L 15529881 15529891 chr3L 15529939 15529973 6 85 0.0 1.0 0.5 4.0 92 chr3L 15529881 intergenic CG43248 - chr3L 15529927 intergenic CG43248 - chr3L 15529973 intergenic CG43248 - chr3L_6_15525001 chr3L_15525001 RAL-837 1632 chr3L 15541608 15541652 chr3L 15541709 15541741 13 107 5.5 7.0 6.2 1.8 133 chr3L 15541608 intron CrebA + chr3L 15541674 intron CrebA + chr3L 15541741 intron CrebA + chr3L_13_15540001 chr3L_15540001 RAL-837 1633 chr3L 15542306 15542348 chr3L 15542432 15542474 12 120 6.0 3.5 4.8 2.1 168 chr3L 15542306 intron CrebA + chr3L 15542390 intron CrebA + chr3L 15542474 intron CrebA + chr3L_12_15540001 chr3L_15540001 RAL-837 1634 chr3L 15600178 15600196 chr3L 15600299 15600317 5 121 4.0 2.5 3.2 1.2 139 chr3L 15600178 intron RhoGAP71E + chr3L 15600248 intron RhoGAP71E + chr3L 15600317 intron RhoGAP71E + chr3L_5_15600001 chr3L_15600001 RAL-837 1635 chr3L 15633163 15633197 chr3L 15633263 15633282 6 97 3.0 0.0 1.5 2.4 119 chr3L 15633163 intron comm3 - chr3L 15633222 intron comm3 - chr3L 15633282 intron comm3 - chr3L_6_15630001 chr3L_15630001 RAL-837 1636 chr3L 15641793 15641812 chr3L 15641898 15641917 5 105 0.0 3.0 1.5 2.0 124 chr3L 15641793 intron comm3 - chr3L 15641855 intron comm3 - chr3L 15641917 intron comm3 - chr3L_5_15640001 chr3L_15640001 RAL-837 1637 chr3L 15742940 15742990 chr3L 15743121 15743147 5 172 4.0 0.0 2.0 1.7 207 chr3L 15742940 intergenic not near genes chr3L 15743044 intergenic not near genes chr3L 15743147 intergenic not near genes chr3L_5_15740001 chr3L_15740001 RAL-837 1638 chr3L 15747543 15747596 chr3L 15747639 15747692 12 96 4.0 3.5 3.8 2.5 149 chr3L 15747543 5` UTR CR45240 + chr3L 15747618 5` UTR CR45240 + chr3L 15747692 5` UTR CR45240 + chr3L_12_15745001 chr3L_15745001 RAL-837 1639 chr3L 15748465 15748484 chr3L 15748535 15748551 7 94 4.5 1.5 3.0 1.8 86 chr3L 15748465 5` UTR CR45240 + chr3L 15748508 5` UTR CR45240 + chr3L 15748551 5` UTR CR45240 + chr3L_7_15745001 chr3L_15745001 RAL-837 1640 chr3L 15782551 15782578 chr3L 15782670 15782700 5 116 0.0 4.0 2.0 1.7 149 chr3L 15782551 intergenic not near genes chr3L 15782626 intergenic not near genes chr3L 15782700 intergenic not near genes chr3L_5_15780001 chr3L_15780001 RAL-837 1641 chr3L 15843043 15843062 chr3L 15843206 15843226 9 163 1.5 8.0 4.8 1.6 183 chr3L 15843043 intron CG32150 - chr3L 15843134 intron CG32150 - chr3L 15843226 intron CG32150 - chr3L_9_15840001 chr3L_15840001 RAL-837 1642 chr3L 15871577 15871616 chr3L 15871681 15871720 14 101 3.0 7.5 5.2 2.3 143 chr3L 15871577 intron pHCl - chr3L 15871648 intron pHCl - chr3L 15871720 intron pHCl - chr3L_14_15870001 chr3L_15870001 RAL-837 1643 chr3L 15883173 15883223 chr3L 15883486 15883531 12 307 5.0 3.0 4.0 2.4 358 chr3L 15883173 intron pHCl - chr3L 15883352 intron pHCl - chr3L 15883531 intron pHCl - chr3L_12_15880001 chr3L_15880001 RAL-837 1644 chr3L 15899225 15899237 chr3L 15899801 15899823 jockey 5 581 5.5 7.5 6.5 0.7 598 chr3L 15899225 intergenic pHCl - chr3L 15899524 intergenic pHCl - chr3L 15899823 intergenic sff - chr3L_5_15895001 chr3L_15895001 RAL-837 1645 chr3L 15920753 15920801 chr3L 15920870 15920880 14 109 3.5 3.5 3.5 3.1 127 chr3L 15920753 intron sff - chr3L 15920816 intron sff - chr3L 15920880 intron sff - chr3L_14_15920001 chr3L_15920001 RAL-837 1646 chr3L 15929178 15929214 chr3L 15938345 15938381 roo 9 9164 8.0 3.5 5.8 1.3 9203 chr3L 15929178 intron Pka-C3 - chr3L 15933780 intron Pka-C3 - chr3L 15938381 intron Pka-C3 - chr3L_9_15930001 chr3L_15930001 RAL-837 1647 chr3L 15948727 15948776 chr3L 15948830 15948867 12 98 2.0 4.0 3.0 3.0 140 chr3L 15948727 intron Pka-C3 - chr3L 15948797 intron Pka-C3 - chr3L 15948867 intron Pka-C3 - chr3L_12_15945001 chr3L_15945001 RAL-837 1648 chr3L 15981657 15981678 chr3L 15981763 15981772 6 102 7.5 3.5 5.5 0.9 115 chr3L 15981657 intron,3` UTR brm -,CG17027 + chr3L 15981714 intron,3` UTR brm -,CG17027 + chr3L 15981772 intron,3` UTR brm -,CG17027 + chr3L_6_15980001 chr3L_15980001 RAL-837 1649 chr3L 16037409 16037421 chr3L 16037465 16037513 8 74 0.5 4.5 2.5 2.3 104 chr3L 16037409 intergenic CG5895 + chr3L 16037461 intergenic CG5895 + chr3L 16037513 intergenic CG5895 + chr3L_8_16035001 chr3L_16035001 RAL-837 1650 chr3L 16070721 16070758 chr3L 16070818 16070855 14 94 2.5 4.0 3.2 3.3 134 chr3L 16070721 intron Mbs + chr3L 16070788 intron Mbs + chr3L 16070855 exon Mbs + chr3L_14_16070001 chr3L_16070001 RAL-837 1651 chr3L 16162587 16162599 chr3L 16162691 16162703 6 104 10.0 6.0 8.0 0.7 116 chr3L 16162587 intron CG5151 - chr3L 16162645 intron CG5151 - chr3L 16162703 intron CG5151 - chr3L_6_16160001 chr3L_16160001 RAL-837 1652 chr3L 16162602 16162607 chr3L 16162685 16162711 4 96 9.0 5.5 7.2 0.5 109 chr3L 16162602 intron CG5151 - chr3L 16162656 intron CG5151 - chr3L 16162711 intron CG5151 - chr3L_4_16160001 chr3L_16160001 RAL-837 1653 chr3L 16162608 16162626 chr3L 16162680 16162730 6 96 4.0 5.5 4.8 1.0 122 chr3L 16162608 intron CG5151 - chr3L 16162669 intron CG5151 - chr3L 16162730 intron CG5151 - chr3L_6_16160001 chr3L_16160001 RAL-837 1654 chr3L 16184091 16184130 chr3L 16188930 16188969 X-element 8 4836 3.5 3.5 3.5 1.8 4878 chr3L 16184091 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188969 intergenic not near genes chr3L_8_16185001 chr3L_16185001 RAL-837 1655 chr3L 16206761 16206782 chr3L 16206859 16206879 11 96 10.0 0.5 5.2 1.8 118 chr3L 16206761 intergenic not near genes chr3L 16206820 intergenic not near genes chr3L 16206879 intergenic not near genes chr3L_11_16205001 chr3L_16205001 RAL-837 1656 chr3L 16212789 16212844 chr3L 16212900 16212945 12 106 4.0 0.0 2.0 4.0 156 chr3L 16212789 intergenic CG13073 - chr3L 16212867 intergenic CG13073 - chr3L 16212945 intergenic CG13073 - chr3L_12_16210001 chr3L_16210001 RAL-837 1657 chr3L 16236321 16236368 chr3L 16236456 16236503 15 125 3.0 5.0 4.0 3.0 182 chr3L 16236321 3` UTR l(3)72Dp + chr3L 16236412 3` UTR l(3)72Dp + chr3L 16236503 3` UTR l(3)72Dp + chr3L_15_16235001 chr3L_16235001 RAL-837 1658 chr3L 16239920 16239947 chr3L 16240016 16240033 13 95 3.0 3.5 3.2 3.1 113 chr3L 16239920 intergenic l(3)72Dr + chr3L 16239976 intergenic not near genes chr3L 16240033 intergenic not near genes chr3L_13_16235001 chr3L_16235001 RAL-837 1659 chr3L 16244821 16244861 chr3L 16244924 16244964 10 96 6.5 5.5 6.0 1.4 143 chr3L 16244821 intergenic not near genes chr3L 16244892 intergenic not near genes chr3L 16244964 intergenic not near genes chr3L_10_16240001 chr3L_16240001 RAL-837 1660 chr3L 16253033 16253074 chr3L 16253131 16253176 7 98 0.0 2.0 1.0 3.5 143 chr3L 16253033 intergenic not near genes chr3L 16253104 intergenic not near genes chr3L 16253176 intergenic not near genes chr3L_7_16250001 chr3L_16250001 RAL-837 1661 chr3L 16431816 16431863 chr3L 16431926 16431973 6 111 4.0 0.0 2.0 2.0 157 chr3L 16431816 intron,intron CG33158 +,dsx-c73A - chr3L 16431894 intron,intron CG33158 +,dsx-c73A - chr3L 16431973 intron,intron CG33158 +,dsx-c73A - chr3L_6_16430001 chr3L_16430001 RAL-837 1662 chr3L 16443828 16443879 chr3L 16446188 16446239 Doc 14 2355 3.5 5.0 4.2 2.7 2411 chr3L 16443828 intron,intron CG33158 +,dsx-c73A - chr3L 16445034 intron,intron CG33158 +,dsx-c73A - chr3L 16446239 intron,intron CG33158 +,dsx-c73A - chr3L_14_16445001 chr3L_16445001 RAL-837 1663 chr3L 16450000 16450052 chr3L 16450105 16450155 13 104 1.0 2.5 1.8 4.6 155 chr3L 16450000 intron,intron CG33158 +,dsx-c73A - chr3L 16450078 intron,intron CG33158 +,dsx-c73A - chr3L 16450155 intron,exon CG33158 +,dsx-c73A - chr3L_13_16450001 chr3L_16450001 RAL-837 1664 chr3L 16540037 16540077 chr3L 16540140 16540171 10 102 5.5 3.5 4.5 1.8 134 chr3L 16540037 intron CG43373 - chr3L 16540104 intron CG43373 - chr3L 16540171 intron CG43373 - chr3L_10_16540001 chr3L_16540001 RAL-837 1665 chr3L 16616514 16616541 chr3L 16621847 16621889 297 5 5344 6.5 5.5 6.0 0.7 5375 chr3L 16616514 3` UTR Abl - chr3L 16619202 3` UTR Abl - chr3L 16621889 3` UTR Abl - chr3L_5_16615001 chr3L_16615001 RAL-837 1666 chr3L 16684009 16684046 chr3L 16689245 16689287 copia 6 5239 4.0 4.5 4.2 1.2 5278 chr3L 16684009 intron,intron Lasp -,CG43954 - chr3L 16686648 intron,intron Lasp -,CG43954 - chr3L 16689287 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_6_16685001 chr3L_16685001 RAL-837 1667 chr3L 16796413 16796433 chr3L 16796513 16796533 5 100 0.0 6.0 3.0 1.2 120 chr3L 16796413 intron CG9674 - chr3L 16796473 intron CG9674 - chr3L 16796533 intron CG9674 - chr3L_5_16795001 chr3L_16795001 RAL-837 1668 chr3L 16820538 16820582 chr3L 16820829 16820873 6 288 3.5 0.5 2.0 2.0 335 chr3L 16820538 intron CG13024 - chr3L 16820706 intron CG13024 - chr3L 16820873 intron CG13024 - chr3L_6_16820001 chr3L_16820001 RAL-837 1669 chr3L 16845005 16845027 chr3L 16845138 16845160 6 132 5.5 10.5 8.0 0.7 155 chr3L 16845005 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845082 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845160 intergenic CG9669 -,CG9715 + chr3L_6_16845001 chr3L_16845001 RAL-837 1670 chr3L 16866194 16866227 chr3L 16866305 16866321 8 108 6.0 2.5 4.2 1.5 127 chr3L 16866194 intron Lmpt + chr3L 16866258 intron Lmpt + chr3L 16866321 intron Lmpt + chr3L_8_16865001 chr3L_16865001 RAL-837 1671 chr3L 16869567 16869606 chr3L 16869660 16869663 11 88 4.0 6.5 5.2 1.8 96 chr3L 16869567 intron Lmpt + chr3L 16869615 intron Lmpt + chr3L 16869663 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RAL-837 1672 chr3L 16873324 16873345 chr3L 16873449 16873463 8 124 8.0 5.0 6.5 1.1 139 chr3L 16873324 intron Lmpt + chr3L 16873394 intron Lmpt + chr3L 16873463 intron Lmpt + chr3L_8_16870001 chr3L_16870001 RAL-837 1673 chr3L 16873350 16873360 chr3L 16873444 16873485 6 118 5.5 4.0 4.8 1.0 135 chr3L 16873350 intron Lmpt + chr3L 16873418 intron Lmpt + chr3L 16873485 intron Lmpt + chr3L_6_16870001 chr3L_16870001 RAL-837 1674 chr3L 16945721 16945745 chr3L 16954894 16954918 roo 4 9171 9.0 7.0 8.0 0.4 9197 chr3L 16945721 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954918 5` UTR Nc73EF + chr3L_4_16950001 chr3L_16950001 RAL-837 1675 chr3L 16973388 16973394 chr3L 23583093 23583099 5 6609705 7.5 8.5 8.0 0.6 6609711 chr3L 16973388 intron Exn + chr3L 20278244 exon gogo - chr3L 23583099 intron AGO3 + chr3L_5_20275001 chr3L_20275001 RAL-837 1676 chr3L 17034916 17034964 chr3L 17035124 17035172 G2 13 206 1.5 4.5 3.0 3.2 256 chr3L 17034916 intergenic not near genes chr3L 17035044 intergenic not near genes chr3L 17035172 intergenic beg + chr3L_13_17035001 chr3L_17035001 RAL-837 1677 chr3L 17084988 17085017 chr3L 17094157 17094180 roo 8 9167 6.5 3.0 4.8 1.4 9192 chr3L 17084988 intron Rbp6 - chr3L 17089584 intron Rbp6 - chr3L 17094180 intron Rbp6 - chr3L_8_17085001 chr3L_17085001 RAL-837 1678 chr3L 17085018 17085026 chr3L 17094152 17094195 roo 5 9160 6.0 2.5 4.2 1.0 9177 chr3L 17085018 intron Rbp6 - chr3L 17089606 intron Rbp6 - chr3L 17094195 intron Rbp6 - chr3L_5_17085001 chr3L_17085001 RAL-837 1679 chr3L 17149143 17149171 chr3L 17149244 17149245 4 94 5.5 0.0 2.8 1.1 102 chr3L 17149143 intron Rbp6 - chr3L 17149194 intron Rbp6 - chr3L 17149245 intron Rbp6 - chr3L_4_17145001 chr3L_17145001 RAL-837 1680 chr3L 17172632 17172652 chr3L 17172736 17172741 6 100 1.5 0.0 0.8 3.3 109 chr3L 17172632 intron Rbp6 - chr3L 17172686 intron Rbp6 - chr3L 17172741 intron Rbp6 - chr3L_6_17170001 chr3L_17170001 RAL-837 1681 chr3L 17283475 17283481 chr3L 17283609 17283615 4 134 2.5 3.0 2.8 1.1 140 chr3L 17283475 intergenic not near genes chr3L 17283545 intergenic not near genes chr3L 17283615 intergenic not near genes chr3L_4_17280001 chr3L_17280001 RAL-837 1682 chr3L 17283483 17283511 chr3L 17283607 17283645 7 130 2.0 3.0 2.5 2.0 162 chr3L 17283483 intergenic not near genes chr3L 17283564 intergenic not near genes chr3L 17283645 intergenic not near genes chr3L_7_17280001 chr3L_17280001 RAL-837 1683 chr3L 17310046 17310087 chr3L 17310158 17310196 5 111 0.0 2.0 1.0 2.5 150 chr3L 17310046 intergenic not near genes chr3L 17310121 intergenic not near genes chr3L 17310196 intergenic not near genes chr3L_5_17310001 chr3L_17310001 RAL-837 1684 chr3L 17510730 17510766 chr3L 17510832 17510870 6 98 2.0 3.0 2.5 1.7 140 chr3L 17510730 exon Oatp74D + chr3L 17510800 intron Oatp74D + chr3L 17510870 intron Oatp74D + chr3L_6_17510001 chr3L_17510001 RAL-837 1685 chr3L 17516959 17517010 chr3L 17524537 17524588 412 10 7574 4.5 4.5 4.5 1.8 7629 chr3L 17516959 intron CG7564 + chr3L 17520774 intron CG7564 + chr3L 17524588 3` UTR CG7564 + chr3L_10_17520001 chr3L_17520001 RAL-837 1686 chr3L 17585331 17585362 chr3L 17585644 17585667 4 307 21.0 30.5 25.8 0.1 336 chr3L 17585331 intron Eip74EF - chr3L 17585499 intron Eip74EF - chr3L 17585667 intron Eip74EF - chr3L_4_17585001 chr3L_17585001 RAL-837 1687 chr3L 17586945 17586993 chr3L 17587099 17587147 10 151 4.5 4.0 4.2 1.9 202 chr3L 17586945 intron Eip74EF - chr3L 17587046 intron Eip74EF - chr3L 17587147 intron Eip74EF - chr3L_10_17585001 chr3L_17585001 RAL-837 1688 chr3L 17615178 17615201 chr3L 17615376 17615399 4 194 3.0 6.5 4.8 0.7 221 chr3L 17615178 intron Eip74EF - chr3L 17615288 intron Eip74EF - chr3L 17615399 intron Eip74EF - chr3L_4_17615001 chr3L_17615001 RAL-837 1689 chr3L 17659716 17659736 chr3L 17659813 17659828 6 96 6.0 7.0 6.5 0.8 112 chr3L 17659716 intergenic Crtc - chr3L 17659772 intergenic Crtc - chr3L 17659828 3` UTR Crtc - chr3L_6_17655001 chr3L_17655001 RAL-837 1690 chr3L 17789834 17789873 chr3L 17789918 17789969 9 90 3.0 3.0 3.0 2.2 135 chr3L 17789834 intergenic not near genes chr3L 17789902 intergenic not near genes chr3L 17789969 intergenic not near genes chr3L_9_17785001 chr3L_17785001 RAL-837 1691 chr3L 17790608 17790630 chr3L 17790889 17790902 7 281 1.0 5.0 3.0 1.8 294 chr3L 17790608 intergenic CG42815 - chr3L 17790755 intergenic CG42815 - chr3L 17790902 intergenic CG42815 - chr3L_7_17790001 chr3L_17790001 RAL-837 1692 chr3L 17799802 17799842 chr3L 17801609 17801649 S-element 11 1801 3.5 4.5 4.0 2.2 1847 chr3L 17799802 intron NUCB1 - chr3L 17800726 intron NUCB1 - chr3L 17801649 intron NUCB1 - chr3L_11_17800001 chr3L_17800001 RAL-837 1693 chr3L 17884676 17884710 chr3L 17884796 17884796 5 113 3.5 4.5 4.0 1.0 120 chr3L 17884676 intergenic CG5506 - chr3L 17884736 intergenic CG5506 - chr3L 17884796 intergenic CG5506 - chr3L_5_17880001 chr3L_17880001 RAL-837 1694 chr3L 17887860 17887878 chr3L 17887965 17887983 4 104 2.5 8.5 5.5 0.6 123 chr3L 17887860 intron CG7402 + chr3L 17887922 intron CG7402 + chr3L 17887983 intron CG7402 + chr3L_4_17885001 chr3L_17885001 RAL-837 1695 chr3L 17918359 17918365 chr3L 17921177 17921188 opus 4 2819 7.5 4.0 5.8 0.6 2829 chr3L 17918359 intergenic not near genes chr3L 17919774 intergenic not near genes chr3L 17921188 intergenic not near genes chr3L_4_17915001 chr3L_17915001 RAL-837 1696 chr3L 17918368 17918404 chr3L 17921176 17921227 opus 7 2821 2.5 4.0 3.2 1.7 2859 chr3L 17918368 intergenic not near genes chr3L 17919798 intergenic not near genes chr3L 17921227 intergenic not near genes chr3L_7_17915001 chr3L_17915001 RAL-837 1697 chr3L 18006203 18006244 chr3L 18006347 18006378 7 139 6.0 2.0 4.0 1.4 175 chr3L 18006203 intron Eip75B - chr3L 18006290 intron Eip75B - chr3L 18006378 intron Eip75B - chr3L_7_18005001 chr3L_18005001 RAL-837 1698 chr3L 18029939 18029975 chr3L 18030036 18030067 6 91 5.5 0.0 2.8 1.6 128 chr3L 18029939 intron Eip75B - chr3L 18030003 intron Eip75B - chr3L 18030067 intron Eip75B - chr3L_6_18030001 chr3L_18030001 RAL-837 1699 chr3L 18034700 18034705 chr3L 18034783 18034808 5 91 3.0 5.0 4.0 1.0 108 chr3L 18034700 intron Eip75B - chr3L 18034754 intron Eip75B - chr3L 18034808 intron Eip75B - chr3L_5_18030001 chr3L_18030001 RAL-837 1700 chr3L 18047685 18047733 chr3L 18056762 18056810 roo 6 9076 4.5 3.5 4.0 1.2 9125 chr3L 18047685 intron Eip75B - chr3L 18052248 intron Eip75B - chr3L 18056810 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RAL-837 1701 chr3L 18077136 18077151 chr3L 18077251 18077266 6 113 8.0 2.0 5.0 1.0 130 chr3L 18077136 intergenic CR45392 + chr3L 18077201 intergenic CR45392 + chr3L 18077266 intergenic CR45392 + chr3L_6_18075001 chr3L_18075001 RAL-837 1702 chr3L 18150302 18150343 chr3L 18150419 18150450 13 114 1.0 3.0 2.0 4.3 148 chr3L 18150302 intron CG7330 + chr3L 18150376 intron CG7330 + chr3L 18150450 intron CG7330 + chr3L_13_18150001 chr3L_18150001 RAL-837 1703 chr3L 18172675 18172691 chr3L 18172771 18172787 7 96 8.0 5.5 6.8 0.9 112 chr3L 18172675 intron W - chr3L 18172731 intron W - chr3L 18172787 intron W - chr3L_7_18170001 chr3L_18170001 RAL-837 1704 chr3L 18172692 18172704 chr3L 18172768 18172800 10 92 7.0 4.0 5.5 1.5 108 chr3L 18172692 intron W - chr3L 18172746 intron W - chr3L 18172800 intron W - chr3L_10_18170001 chr3L_18170001 RAL-837 1705 chr3L 18198930 18198931 chr3L 24821493 24821494 6 6622563 0.0 11.5 5.8 0.9 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-837 1706 chr3L 18214531 18214548 chr3L 18214617 18214644 4 94 1.0 3.0 2.0 1.3 113 chr3L 18214531 intergenic not near genes chr3L 18214588 intergenic not near genes chr3L 18214644 intergenic not near genes chr3L_4_18210001 chr3L_18210001 RAL-837 1707 chr3L 18223166 18223188 chr3L 18223250 18223303 6 88 0.0 0.0 0.0 6.0 137 chr3L 18223166 intergenic not near genes chr3L 18223234 intergenic not near genes chr3L 18223303 intergenic not near genes chr3L_6_18220001 chr3L_18220001 RAL-837 1708 chr3L 18237283 18237319 chr3L 18237376 18237424 15 105 1.5 2.0 1.8 5.4 141 chr3L 18237283 intergenic not near genes chr3L 18237354 intergenic not near genes chr3L 18237424 intergenic not near genes chr3L_15_18235001 chr3L_18235001 RAL-837 1709 chr3L 18242523 18242564 chr3L 18242614 18242660 10 94 7.5 6.5 7.0 1.2 137 chr3L 18242523 intergenic not near genes chr3L 18242592 intergenic not near genes chr3L 18242660 intergenic not near genes chr3L_10_18240001 chr3L_18240001 RAL-837 1710 chr3L 18248936 18248977 chr3L 18249054 18249095 9 115 0.5 4.0 2.2 2.8 159 chr3L 18248936 intergenic not near genes chr3L 18249016 intergenic not near genes chr3L 18249095 intergenic not near genes chr3L_9_18245001 chr3L_18245001 RAL-837 1711 chr3L 18255333 18255371 chr3L 18255543 18255580 13 217 2.0 1.0 1.5 5.2 247 chr3L 18255333 intergenic not near genes chr3L 18255456 intergenic not near genes chr3L 18255580 intergenic not near genes chr3L_13_18255001 chr3L_18255001 RAL-837 1712 chr3L 18262450 18262485 chr3L 18262553 18262578 6 101 3.5 3.0 3.2 1.4 128 chr3L 18262450 intergenic not near genes chr3L 18262514 intergenic not near genes chr3L 18262578 intergenic not near genes chr3L_6_18260001 chr3L_18260001 RAL-837 1713 chr3L 18301334 18301376 chr3L 18301443 18301477 11 108 0.5 4.0 2.2 3.4 143 chr3L 18301334 intergenic CG13700 - chr3L 18301406 intergenic CG13700 - chr3L 18301477 intergenic CG13700 - chr3L_11_18300001 chr3L_18300001 RAL-837 1714 chr3L 18343659 18343678 chr3L 18343957 18343976 4 298 2.0 6.5 4.2 0.8 317 chr3L 18343659 intergenic not near genes chr3L 18343818 intergenic not near genes chr3L 18343976 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-837 1715 chr3L 18376069 18376102 chr3L 18376178 18376199 8 106 3.0 1.0 2.0 2.7 130 chr3L 18376069 intergenic not near genes chr3L 18376134 intergenic not near genes chr3L 18376199 intergenic not near genes chr3L_8_18375001 chr3L_18375001 RAL-837 1716 chr3L 18408711 18408752 chr3L 18408817 18408858 13 105 3.5 3.5 3.5 2.9 147 chr3L 18408711 intergenic not near genes chr3L 18408784 intergenic not near genes chr3L 18408858 intergenic not near genes chr3L_13_18405001 chr3L_18405001 RAL-837 1717 chr3L 18436048 18436093 chr3L 18436157 18436211 7 115 2.5 3.0 2.8 1.8 163 chr3L 18436048 intergenic not near genes chr3L 18436130 intergenic not near genes chr3L 18436211 intergenic not near genes chr3L_7_18435001 chr3L_18435001 RAL-837 1718 chr3L 18445243 18445267 chr3L 18445341 18445360 9 97 1.5 4.5 3.0 2.2 117 chr3L 18445243 intergenic not near genes chr3L 18445302 intergenic not near genes chr3L 18445360 intergenic not near genes chr3L_9_18445001 chr3L_18445001 RAL-837 1719 chr3L 18448599 18448621 chr3L 18448711 18448733 5 112 2.5 2.0 2.2 1.6 134 chr3L 18448599 intergenic not near genes chr3L 18448666 intergenic not near genes chr3L 18448733 intergenic not near genes chr3L_5_18445001 chr3L_18445001 RAL-837 1720 chr3L 18456256 18456302 chr3L 18456364 18456404 12 106 4.5 3.0 3.8 2.5 148 chr3L 18456256 intergenic CR44670 - chr3L 18456330 intergenic CR44670 - chr3L 18456404 3` UTR CR44670 - chr3L_12_18455001 chr3L_18455001 RAL-837 1721 chr3L 18506142 18506160 chr3L 18509599 18509643 F-element 5 3470 2.5 6.0 4.2 1.0 3501 chr3L 18506142 intergenic not near genes chr3L 18507892 intergenic not near genes chr3L 18509643 intergenic not near genes chr3L_5_18505001 chr3L_18505001 RAL-837 1722 chr3L 18528611 18528658 chr3L 18537792 18537839 roo 13 9179 4.5 7.0 5.8 1.9 9228 chr3L 18528611 intergenic not near genes chr3L 18533225 intergenic not near genes chr3L 18537839 intergenic not near genes chr3L_13_18530001 chr3L_18530001 RAL-837 1723 chr3L 18590253 18590287 chr3L 18590355 18590389 10 99 3.0 3.0 3.0 2.5 136 chr3L 18590253 intergenic CG7271 + chr3L 18590321 intergenic CG7271 + chr3L 18590389 intergenic CG7271 + chr3L_10_18590001 chr3L_18590001 RAL-837 1724 chr3L 18593948 18593981 chr3L 18595934 18595984 Doc 7 1995 3.0 1.5 2.2 2.2 2036 chr3L 18593948 intergenic term - chr3L 18594966 intergenic not near genes chr3L 18595984 intergenic CR45389 + chr3L_7_18590001 chr3L_18590001 RAL-837 1725 chr3L 18631276 18631281 chr3L 18631375 18631380 4 99 6.5 4.5 5.5 0.6 104 chr3L 18631276 intron MYPT-75D + chr3L 18631328 intron MYPT-75D + chr3L 18631380 intron MYPT-75D + chr3L_4_18630001 chr3L_18630001 RAL-837 1726 chr3L 18631282 18631305 chr3L 18631371 18631404 4 93 3.0 4.0 3.5 0.9 122 chr3L 18631282 intron MYPT-75D + chr3L 18631343 intron MYPT-75D + chr3L 18631404 intron MYPT-75D + chr3L_4_18630001 chr3L_18630001 RAL-837 1727 chr3L 18634633 18634652 chr3L 18634717 18634724 5 89 2.5 0.5 1.5 2.0 91 chr3L 18634633 intron MYPT-75D + chr3L 18634678 intron MYPT-75D + chr3L 18634724 intron MYPT-75D + chr3L_5_18630001 chr3L_18630001 RAL-837 1728 chr3L 18651089 18651111 chr3L 18651185 18651196 5 91 6.0 5.0 5.5 0.8 107 chr3L 18651089 intron MYPT-75D + chr3L 18651142 intron MYPT-75D + chr3L 18651196 intron MYPT-75D + chr3L_5_18650001 chr3L_18650001 RAL-837 1729 chr3L 18677869 18677907 chr3L 18677984 18678022 9 115 5.0 2.5 3.8 1.9 153 chr3L 18677869 3` UTR GNBP1 + chr3L 18677946 intergenic GNBP1 + chr3L 18678022 intergenic GNBP1 + chr3L_9_18675001 chr3L_18675001 RAL-837 1730 chr3L 18710737 18710790 chr3L 18718709 18718761 Stalker2 14 7966 3.5 5.5 4.5 2.5 8024 chr3L 18710737 intergenic not near genes chr3L 18714749 intergenic not near genes chr3L 18718761 intergenic not near genes chr3L_14_18710001 chr3L_18710001 RAL-837 1731 chr3L 18721783 18721804 chr3L 18721869 18721915 7 104 1.0 6.0 3.5 1.6 132 chr3L 18721783 intergenic CG12477 - chr3L 18721849 intergenic CG12477 - chr3L 18721915 3` UTR CG12477 - chr3L_7_18720001 chr3L_18720001 RAL-837 1732 chr3L 18740949 18740960 chr3L 18741122 18741133 6 173 0.5 6.0 3.2 1.4 184 chr3L 18740949 intergenic not near genes chr3L 18741041 intergenic not near genes chr3L 18741133 intergenic not near genes chr3L_6_18740001 chr3L_18740001 RAL-837 1733 chr3L 18753538 18753558 chr3L 18753640 18753650 8 101 2.0 4.5 3.2 1.9 112 chr3L 18753538 intron ftz-f1 - chr3L 18753594 intron ftz-f1 - chr3L 18753650 intron ftz-f1 - chr3L_8_18750001 chr3L_18750001 RAL-837 1734 chr3L 18772402 18772429 chr3L 18781098 18781124 roo 8 8699 3.0 3.0 3.0 2.0 8722 chr3L 18772402 intron ftz-f1 - chr3L 18776763 intron ftz-f1 - chr3L 18781124 intron ftz-f1 - chr3L_8_18775001 chr3L_18775001 RAL-837 1735 chr3L 18784374 18784405 chr3L 18784483 18784514 8 104 4.0 3.0 3.5 1.8 140 chr3L 18784374 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784514 intron ftz-f1 - chr3L_8_18780001 chr3L_18780001 RAL-837 1736 chr3L 18791530 18791547 chr3L 18791734 18791751 6 203 2.0 3.5 2.8 1.6 221 chr3L 18791530 intron ftz-f1 - chr3L 18791640 intron ftz-f1 - chr3L 18791751 intron ftz-f1 - chr3L_6_18790001 chr3L_18790001 RAL-837 1737 chr3L 18833775 18833813 chr3L 18834951 18834964 1360 7 1169 2.5 5.0 3.8 1.5 1189 chr3L 18833775 intron Indy - chr3L 18834370 intron Indy - chr3L 18834964 intron Indy - chr3L_7_18830001 chr3L_18830001 RAL-837 1738 chr3L 18839722 18839732 chr3L 18839825 18839835 4 103 1.0 2.5 1.8 1.4 113 chr3L 18839722 intron Indy - chr3L 18839778 intron Indy - chr3L 18839835 intron Indy - chr3L_4_18835001 chr3L_18835001 RAL-837 1739 chr3L 18839738 18839757 chr3L 18839818 18839860 13 98 1.0 1.0 1.0 6.5 122 chr3L 18839738 intron Indy - chr3L 18839799 intron Indy - chr3L 18839860 intron Indy - chr3L_13_18835001 chr3L_18835001 RAL-837 1740 chr3L 18841368 18841376 chr3L 18841480 18841496 8 122 7.0 4.5 5.8 1.2 128 chr3L 18841368 intron Indy - chr3L 18841432 intron Indy - chr3L 18841496 intron Indy - chr3L_8_18840001 chr3L_18840001 RAL-837 1741 chr3L 18843851 18843872 chr3L 18843964 18843980 7 116 6.5 4.0 5.2 1.1 129 chr3L 18843851 intron Indy - chr3L 18843916 intron Indy - chr3L 18843980 intron Indy - chr3L_7_18840001 chr3L_18840001 RAL-837 1742 chr3L 18853986 18854023 chr3L 18854107 18854144 9 116 2.0 0.5 1.2 4.1 158 chr3L 18853986 intergenic CR45387 + chr3L 18854065 intergenic CR45387 + chr3L 18854144 intergenic CR45387 + chr3L_9_18850001 chr3L_18850001 RAL-837 1743 chr3L 18868963 18868996 chr3L 18869051 18869097 12 100 4.0 3.5 3.8 2.5 134 chr3L 18868963 3` UTR Dysb + chr3L 18869030 3` UTR Dysb + chr3L 18869097 3` UTR Dysb + chr3L_12_18865001 chr3L_18865001 RAL-837 1744 chr3L 18885968 18886014 chr3L 18886064 18886097 12 94 2.5 2.0 2.2 3.8 129 chr3L 18885968 intron CG3961 - chr3L 18886032 intron CG3961 - chr3L 18886097 intron CG3961 - chr3L_12_18885001 chr3L_18885001 RAL-837 1745 chr3L 18896771 18896778 chr3L 18896894 18896928 4 134 1.0 2.0 1.5 1.6 157 chr3L 18896771 intron CG3902 - chr3L 18896850 intron CG3902 - chr3L 18896928 intron CG3902 - chr3L_4_18895001 chr3L_18895001 RAL-837 1746 chr3L 18933615 18933660 chr3L 18933723 18933768 7 109 5.0 6.5 5.8 1.0 153 chr3L 18933615 intron CG32204 - chr3L 18933692 intron CG32204 - chr3L 18933768 intron CG32204 - chr3L_7_18930001 chr3L_18930001 RAL-837 1747 chr3L 18972389 18972421 chr3L 18972465 18972517 6 90 3.0 5.0 4.0 1.2 128 chr3L 18972389 intergenic not near genes chr3L 18972453 intergenic not near genes chr3L 18972517 intergenic not near genes chr3L_6_18970001 chr3L_18970001 RAL-837 1748 chr3L 19008824 19008869 chr3L 19009185 19009227 jockey 8 360 4.0 5.5 4.8 1.4 403 chr3L 19008824 intron nkd - chr3L 19009026 intron nkd - chr3L 19009227 intron nkd - chr3L_8_19005001 chr3L_19005001 RAL-837 1749 chr3L 19015157 19015187 chr3L 19015261 19015291 5 104 8.0 1.5 4.8 0.9 134 chr3L 19015157 intron nkd - chr3L 19015224 intron nkd - chr3L 19015291 intron nkd - chr3L_5_19015001 chr3L_19015001 RAL-837 1750 chr3L 19059171 19059223 chr3L 19059653 19059688 13 469 32.0 35.5 33.8 0.4 517 chr3L 19059171 intergenic CG3797 - chr3L 19059430 3` UTR CG3797 - chr3L 19059688 3` UTR CG3797 - chr3L_13_19055001 chr3L_19055001 RAL-837 1751 chr3L 19080094 19080117 chr3L 19080642 19080667 4 548 4.0 4.0 4.0 0.8 573 chr3L 19080094 intron Mkp3 - chr3L 19080380 intron Mkp3 - chr3L 19080667 intron Mkp3 - chr3L_4_19080001 chr3L_19080001 RAL-837 1752 chr3L 19111383 19111408 chr3L 19111488 19111513 6 103 4.0 3.5 3.8 1.2 130 chr3L 19111383 intron CG14082 - chr3L 19111448 intron CG14082 - chr3L 19111513 intron CG14082 - chr3L_6_19110001 chr3L_19110001 RAL-837 1753 chr3L 19117022 19117076 chr3L 19124489 19124508 mdg1 22 7463 5.0 5.0 5.0 3.7 7486 chr3L 19117022 intron CG14082 - chr3L 19120765 intron CG14082 - chr3L 19124508 intron CG14082 - chr3L_22_19120001 chr3L_19120001 RAL-837 1754 chr3L 19127363 19127396 chr3L 19127440 19127470 12 91 2.0 1.0 1.5 4.8 107 chr3L 19127363 intron CG14082 - chr3L 19127416 intron CG14082 - chr3L 19127470 intron CG14082 - chr3L_12_19125001 chr3L_19125001 RAL-837 1755 chr3L 19127711 19127762 chr3L 19127818 19127869 10 99 2.5 3.5 3.0 2.5 158 chr3L 19127711 intron CG14082 - chr3L 19127790 intron CG14082 - chr3L 19127869 intron CG14082 - chr3L_10_19125001 chr3L_19125001 RAL-837 1756 chr3L 19138145 19138157 chr3L 19138254 19138259 4 110 0.0 6.5 3.2 1.0 114 chr3L 19138145 intron CG14082 - chr3L 19138202 intron CG14082 - chr3L 19138259 intron CG14082 - chr3L_4_19135001 chr3L_19135001 RAL-837 1757 chr3L 19208043 19208056 chr3L 19209437 19209450 Doc 5 1394 9.0 2.5 5.8 0.7 1407 chr3L 19208043 intron fz2 - chr3L 19208746 intron fz2 - chr3L 19209450 intron fz2 - chr3L_5_19205001 chr3L_19205001 RAL-837 1758 chr3L 19208057 19208091 chr3L 19209430 19209485 Doc 8 1386 2.0 1.5 1.8 2.9 1428 chr3L 19208057 intron fz2 - chr3L 19208771 intron fz2 - chr3L 19209485 intron fz2 - chr3L_8_19205001 chr3L_19205001 RAL-837 1759 chr3L 19220634 19220637 chr3L 22908066 22908067 4 3687431 19.0 18.0 18.5 0.2 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-837 1760 chr3L 19269796 19269821 chr3L 19270020 19270039 6 216 8.5 6.0 7.2 0.7 243 chr3L 19269796 intron,exon CG14085 +,CG14088 - chr3L 19269918 intron,exon CG14085 +,CG14088 - chr3L 19270039 intron,exon CG14085 +,CG14088 - chr3L_6_19265001 chr3L_19265001 RAL-837 1761 chr3L 19269822 19269849 chr3L 19270019 19270073 9 220 4.0 5.5 4.8 1.6 251 chr3L 19269822 intron,exon CG14085 +,CG14088 - chr3L 19269948 intron,exon CG14085 +,CG14088 - chr3L 19270073 intron,exon CG14085 +,CG14088 - chr3L_9_19265001 chr3L_19265001 RAL-837 1762 chr3L 19342750 19342773 chr3L 19342861 19342872 11 109 4.5 3.0 3.8 2.3 122 chr3L 19342750 3` UTR CG32206 - chr3L 19342811 3` UTR CG32206 - chr3L 19342872 3` UTR CG32206 - chr3L_11_19340001 chr3L_19340001 RAL-837 1763 chr3L 19417785 19417808 chr3L 19417885 19417908 4 100 8.0 3.0 5.5 0.6 123 chr3L 19417785 intergenic not near genes chr3L 19417846 intergenic not near genes chr3L 19417908 intergenic not near genes chr3L_4_19415001 chr3L_19415001 RAL-837 1764 chr3L 19417810 19417833 chr3L 19417877 19417891 5 75 5.0 3.5 4.2 1.0 81 chr3L 19417810 intergenic not near genes chr3L 19417850 intergenic not near genes chr3L 19417891 intergenic not near genes chr3L_5_19415001 chr3L_19415001 RAL-837 1765 chr3L 19426734 19426782 chr3L 19426832 19426854 10 87 1.5 3.0 2.2 3.1 120 chr3L 19426734 intergenic not near genes chr3L 19426794 intergenic not near genes chr3L 19426854 intergenic not near genes chr3L_10_19425001 chr3L_19425001 RAL-837 1766 chr3L 19430377 19430435 chr3L 19430475 19430533 9 95 3.5 3.5 3.5 2.0 156 chr3L 19430377 intergenic not near genes chr3L 19430455 intergenic not near genes chr3L 19430533 intergenic not near genes chr3L_9_19430001 chr3L_19430001 RAL-837 1767 chr3L 19488477 19488498 chr3L 19488579 19488600 6 100 6.0 2.0 4.0 1.2 123 chr3L 19488477 intergenic pncr009:3L -,CG32212 + chr3L 19488538 intergenic pncr009:3L -,CG32212 + chr3L 19488600 intergenic pncr009:3L -,CG32212 + chr3L_6_19485001 chr3L_19485001 RAL-837 1768 chr3L 19641363 19641387 chr3L 19641480 19641504 6 117 3.5 6.5 5.0 1.0 141 chr3L 19641363 intron CG8786 - chr3L 19641434 intron CG8786 - chr3L 19641504 intron CG8786 - chr3L_6_19640001 chr3L_19640001 RAL-837 1769 chr3L 19820278 19820318 chr3L 19827847 19827852 412 4 7560 5.0 5.0 5.0 0.7 7574 chr3L 19820278 intron Deaf1 + chr3L 19824065 intron Deaf1 + chr3L 19827852 intron Deaf1 + chr3L_4_19820001 chr3L_19820001 RAL-837 1770 chr3L 19848489 19848529 chr3L 19857699 19857731 roo 11 9201 4.5 5.0 4.8 1.9 9242 chr3L 19848489 intron Papss + chr3L 19853110 intron Papss + chr3L 19857731 intron Papss + chr3L_11_19850001 chr3L_19850001 RAL-837 1771 chr3L 19861810 19861853 chr3L 19863618 19863661 S-element 13 1803 3.0 8.5 5.8 1.9 1851 chr3L 19861810 5` UTR CR45433 + chr3L 19862736 intergenic not near genes chr3L 19863661 intergenic not near genes chr3L_13_19860001 chr3L_19860001 RAL-837 1772 chr3L 19961260 19961292 chr3L 19961491 19961523 6 228 5.5 3.5 4.5 1.1 263 chr3L 19961260 intron Ac76E + chr3L 19961392 intron Ac76E + chr3L 19961523 intron Ac76E + chr3L_6_19960001 chr3L_19960001 RAL-837 1773 chr3L 19981184 19981236 chr3L 19981284 19981298 11 91 5.5 4.0 4.8 1.9 114 chr3L 19981184 intergenic CG17732 + chr3L 19981241 intergenic CG17732 + chr3L 19981298 intergenic CG17732 + chr3L_11_19980001 chr3L_19980001 RAL-837 1774 chr3L 20096099 20096118 chr3L 20096196 20096202 4 91 4.5 0.5 2.5 1.1 103 chr3L 20096099 intergenic not near genes chr3L 20096150 intergenic not near genes chr3L 20096202 intergenic not near genes chr3L_4_20095001 chr3L_20095001 RAL-837 1775 chr3L 20113640 20113685 chr3L 20122917 20122962 roo 8 9276 9.5 6.0 7.8 0.9 9322 chr3L 20113640 intergenic not near genes chr3L 20118301 intergenic not near genes chr3L 20122962 intergenic not near genes chr3L_8_20115001 chr3L_20115001 RAL-837 1776 chr3L 20143067 20143091 chr3L 20143167 20143191 6 100 3.0 6.0 4.5 1.1 124 chr3L 20143067 intergenic not near genes chr3L 20143129 intergenic not near genes chr3L 20143191 intergenic not near genes chr3L_6_20140001 chr3L_20140001 RAL-837 1777 chr3L 20143096 20143114 chr3L 20143166 20143214 7 91 2.5 5.5 4.0 1.4 118 chr3L 20143096 intergenic not near genes chr3L 20143155 intergenic not near genes chr3L 20143214 intergenic not near genes chr3L_7_20140001 chr3L_20140001 RAL-837 1778 chr3L 20148269 20148285 chr3L 20148379 20148395 5 110 8.0 6.0 7.0 0.6 126 chr3L 20148269 intergenic not near genes chr3L 20148332 intergenic not near genes chr3L 20148395 intergenic not near genes chr3L_5_20145001 chr3L_20145001 RAL-837 1779 chr3L 20148290 20148301 chr3L 20148378 20148390 4 96 6.0 6.0 6.0 0.6 100 chr3L 20148290 intergenic not near genes chr3L 20148340 intergenic not near genes chr3L 20148390 intergenic not near genes chr3L_4_20145001 chr3L_20145001 RAL-837 1780 chr3L 20158878 20158928 chr3L 20159040 20159053 14 157 3.0 4.0 3.5 3.1 175 chr3L 20158878 intron CG42674 - chr3L 20158966 intron CG42674 - chr3L 20159053 intron CG42674 - chr3L_14_20155001 chr3L_20155001 RAL-837 1781 chr3L 20257312 20257361 chr3L 20258452 20258469 pogo 10 1132 4.5 3.0 3.8 2.1 1157 chr3L 20257312 intron rdgC + chr3L 20257890 intron rdgC + chr3L 20258469 intron rdgC + chr3L_10_20255001 chr3L_20255001 RAL-837 1782 chr3L 20262778 20262826 chr3L 20262909 20262929 10 126 3.5 4.5 4.0 2.0 151 chr3L 20262778 exon rdgC + chr3L 20262854 intron rdgC + chr3L 20262929 intron rdgC + chr3L_10_20260001 chr3L_20260001 RAL-837 1783 chr3L 20386922 20386969 chr3L 20387044 20387091 12 115 3.5 4.5 4.0 2.4 169 chr3L 20386922 intron fbl + chr3L 20387006 intron fbl + chr3L 20387091 intron fbl + chr3L_12_20385001 chr3L_20385001 RAL-837 1784 chr3L 20403565 20403608 chr3L 20403675 20403697 14 104 1.5 6.0 3.8 2.9 132 chr3L 20403565 intergenic not near genes chr3L 20403631 intergenic not near genes chr3L 20403697 intergenic not near genes chr3L_14_20400001 chr3L_20400001 RAL-837 1785 chr3L 20431604 20431623 chr3L 20431741 20431796 10 166 3.5 2.0 2.8 2.6 192 chr3L 20431604 exon Las - chr3L 20431700 intron Las - chr3L 20431796 intron Las - chr3L_10_20430001 chr3L_20430001 RAL-837 1786 chr3L 20476736 20476783 chr3L 20484355 20484402 springer 5 7617 4.5 5.0 4.8 0.9 7666 chr3L 20476736 3` UTR isoQC + chr3L 20480569 intergenic not near genes chr3L 20484402 3` UTR ZnT77C - chr3L_5_20480001 chr3L_20480001 RAL-837 1787 chr3L 20525229 20525229 chr3L 22908066 22908067 4 2382838 10.0 18.0 14.0 0.3 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-837 1788 chr3L 20525229 20525229 chr3L 24821493 24821494 5 4296264 10.0 11.5 10.8 0.4 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-837 1789 chr3L 20705706 20705735 chr3L 20705803 20705832 6 97 9.0 7.0 8.0 0.7 126 chr3L 20705706 intergenic not near genes chr3L 20705769 intergenic not near genes chr3L 20705832 intergenic not near genes chr3L_6_20705001 chr3L_20705001 RAL-837 1790 chr3L 20752601 20752640 chr3L 20755531 20755572 8 2931 2.5 4.0 3.2 1.9 2971 chr3L 20752601 intergenic not near genes chr3L 20754086 intergenic not near genes chr3L 20755572 exon CG33912 - chr3L_8_20750001 chr3L_20750001 RAL-837 1791 chr3L 20821277 20821307 chr3L 20824764 20824776 NOF 6 3485 3.5 3.5 3.5 1.3 3499 chr3L 20821277 intron Pka-R1 + chr3L 20823026 intron Pka-R1 + chr3L 20824776 intron Pka-R1 + chr3L_6_20820001 chr3L_20820001 RAL-837 1792 chr3L 20858070 20858105 chr3L 20858172 20858224 9 112 5.5 3.0 4.2 1.7 154 chr3L 20858070 intron CG32432 - chr3L 20858147 intron CG32432 - chr3L 20858224 intron CG32432 - chr3L_9_20855001 chr3L_20855001 RAL-837 1793 chr3L 20899001 20899036 chr3L 20899112 20899147 6 103 4.0 5.5 4.8 1.0 146 chr3L 20899001 intergenic CG43931 + chr3L 20899074 intergenic not near genes chr3L 20899147 intergenic not near genes chr3L_6_20895001 chr3L_20895001 RAL-837 1794 chr3L 20912160 20912196 chr3L 20912275 20912322 8 120 2.5 4.0 3.2 1.9 162 chr3L 20912160 intergenic not near genes chr3L 20912241 intergenic not near genes chr3L 20912322 intergenic not near genes chr3L_8_20910001 chr3L_20910001 RAL-837 1795 chr3L 20913727 20913775 chr3L 20913829 20913842 12 97 5.0 3.5 4.2 2.3 115 chr3L 20913727 intergenic CR43930 - chr3L 20913784 intergenic CR43930 - chr3L 20913842 intergenic CR43930 - chr3L_12_20910001 chr3L_20910001 RAL-837 1796 chr3L 20935186 20935209 chr3L 20935273 20935289 10 93 3.5 3.0 3.2 2.4 103 chr3L 20935186 intron fng - chr3L 20935238 intron fng - chr3L 20935289 intron fng - chr3L_10_20935001 chr3L_20935001 RAL-837 1797 chr3L 20936851 20936894 chr3L 20936960 20936969 8 101 1.5 3.5 2.5 2.3 118 chr3L 20936851 intron fng - chr3L 20936910 intron fng - chr3L 20936969 intron fng - chr3L_8_20935001 chr3L_20935001 RAL-837 1798 chr3L 21014906 21014948 chr3L 21023397 21023448 Tirant 12 8493 3.0 3.5 3.2 2.9 8542 chr3L 21014906 intron skd - chr3L 21019177 intron skd - chr3L 21023448 intron skd - chr3L_12_21015001 chr3L_21015001 RAL-837 1799 chr3L 21065474 21065508 chr3L 21065572 21065615 11 103 3.5 5.0 4.2 2.1 141 chr3L 21065474 intron siz + chr3L 21065544 intron siz + chr3L 21065615 intron siz + chr3L_11_21065001 chr3L_21065001 RAL-837 1800 chr3L 21082190 21082240 chr3L 21082288 21082322 9 93 5.5 2.0 3.8 1.9 132 chr3L 21082190 intron ko - chr3L 21082256 intron ko - chr3L 21082322 intron ko - chr3L_9_21080001 chr3L_21080001 RAL-837 1801 chr3L 21115831 21115865 chr3L 21116001 21116001 9 171 3.0 3.5 3.2 2.1 170 chr3L 21115831 intron ko - chr3L 21115916 intron ko - chr3L 21116001 intron ko - chr3L_9_21115001 chr3L_21115001 RAL-837 1802 chr3L 21151845 21151896 chr3L 21156949 21156974 flea 10 5100 3.0 3.0 3.0 2.5 5129 chr3L 21151845 intron Ac78C - chr3L 21154410 intron Ac78C - chr3L 21156974 intron Ac78C - chr3L_10_21150001 chr3L_21150001 RAL-837 1803 chr3L 21172817 21172873 chr3L 21172937 21172968 5 113 3.5 2.5 3.0 1.2 151 chr3L 21172817 intergenic chb +,asparagine-synthetase + chr3L 21172892 5` UTR chb + chr3L 21172968 5` UTR chb + chr3L_5_21170001 chr3L_21170001 RAL-837 1804 chr3L 21306138 21306179 chr3L 21315312 21315342 roo 13 9175 2.0 4.5 3.2 3.1 9204 chr3L 21306138 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310740 intron Pc - chr3L 21315342 3` UTR Pc - chr3L_13_21310001 chr3L_21310001 RAL-837 1805 chr3L 21319510 21319559 chr3L 21319620 21319638 11 103 4.0 4.0 4.0 2.2 128 chr3L 21319510 5` UTR Rab26 + chr3L 21319574 5` UTR Rab26 + chr3L 21319638 5` UTR Rab26 + chr3L_11_21315001 chr3L_21315001 RAL-837 1806 chr3L 21330689 21330715 chr3L 21330773 21330773 8 83 6.5 5.0 5.8 1.2 84 chr3L 21330689 intron Rab26 + chr3L 21330731 intron Rab26 + chr3L 21330773 intron Rab26 + chr3L_8_21330001 chr3L_21330001 RAL-837 1807 chr3L 21408439 21408489 chr3L 21408537 21408587 10 94 1.5 4.0 2.8 2.6 148 chr3L 21408439 intron rgn + chr3L 21408513 intron rgn + chr3L 21408587 intron rgn + chr3L_10_21405001 chr3L_21405001 RAL-837 1808 chr3L 21415127 21415163 chr3L 21415230 21415265 12 101 2.0 7.0 4.5 2.2 138 chr3L 21415127 intron rgn + chr3L 21415196 intron rgn + chr3L 21415265 intron rgn + chr3L_12_21415001 chr3L_21415001 RAL-837 1809 chr3L 21458326 21458348 chr3L 21458441 21458449 INE-1 6 113 7.0 4.0 5.5 0.9 123 chr3L 21458326 intergenic not near genes chr3L 21458388 intergenic not near genes chr3L 21458449 intergenic not near genes chr3L_6_21455001 chr3L_21455001 RAL-837 1810 chr3L 21498827 21498864 chr3L 21500483 21500520 1360 6 1656 5.5 6.0 5.8 0.9 1693 chr3L 21498827 5` UTR,intron CR43933 +,Glg1 - chr3L 21499674 intron Glg1 - chr3L 21500520 intron Glg1 - chr3L_6_21495001 chr3L_21495001 RAL-837 1811 chr3L 21596660 21596703 chr3L 21596896 21596939 4 236 3.0 3.5 3.2 1.0 279 chr3L 21596660 intron TfAP-2 + chr3L 21596800 intron TfAP-2 + chr3L 21596939 intron TfAP-2 + chr3L_4_21595001 chr3L_21595001 RAL-837 1812 chr3L 21639179 21639226 chr3L 21639278 21639315 17 95 3.5 4.0 3.8 3.5 136 chr3L 21639179 intergenic CG32444 +,CG32445 + chr3L 21639247 intergenic CG32445 +,CG32444 + chr3L 21639315 intergenic CG32445 +,CG32444 + chr3L_17_21635001 chr3L_21635001 RAL-837 1813 chr3L 21769056 21769082 chr3L 21769153 21769189 6 97 2.5 4.5 3.5 1.3 133 chr3L 21769056 intron,intron Syn1 -,CG42689 + chr3L 21769122 intron,intron Syn1 -,CG42689 + chr3L 21769189 intron,intron Syn1 -,CG42689 + chr3L_6_21765001 chr3L_21765001 RAL-837 1814 chr3L 21776680 21776700 chr3L 21776772 21776807 5 103 0.5 4.5 2.5 1.4 127 chr3L 21776680 intron,intron CG42689 +,CG42552 + chr3L 21776744 intron,intron CG42689 +,CG42552 + chr3L 21776807 intron,intron CG42689 +,CG42552 + chr3L_5_21775001 chr3L_21775001 RAL-837 1815 chr3L 21799930 21799948 chr3L 21800035 21800035 7 102 3.5 5.0 4.2 1.3 105 chr3L 21799930 intergenic not near genes chr3L 21799982 intergenic not near genes chr3L 21800035 intergenic not near genes chr3L_7_21795001 chr3L_21795001 RAL-837 1816 chr3L 21799952 21799962 chr3L 21800031 21800053 4 95 3.0 5.0 4.0 0.8 101 chr3L 21799952 intergenic not near genes chr3L 21800002 intergenic not near genes chr3L 21800053 intergenic not near genes chr3L_4_21795001 chr3L_21795001 RAL-837 1817 chr3L 21824494 21824521 chr3L 21824596 21824640 9 115 4.0 3.5 3.8 1.9 146 chr3L 21824494 3` UTR CG7407 + chr3L 21824567 3` UTR CG7407 + chr3L 21824640 intergenic CG7407 +,CG7414 + chr3L_9_21820001 chr3L_21820001 RAL-837 1818 chr3L 21828921 21828969 chr3L 21829028 21829036 8 101 5.0 2.5 3.8 1.7 115 chr3L 21828921 intergenic CR43309 -,CG32448 - chr3L 21828978 intergenic CR43309 -,CG32448 - chr3L 21829036 intergenic CR43309 - chr3L_8_21825001 chr3L_21825001 RAL-837 1819 chr3L 21836724 21836754 chr3L 21836814 21836860 4 86 7.0 5.5 6.2 0.6 136 chr3L 21836724 3` UTR P5CDh1 - chr3L 21836792 3` UTR P5CDh1 - chr3L 21836860 3` UTR P5CDh1 - chr3L_4_21835001 chr3L_21835001 RAL-837 1820 chr3L 21847410 21847452 chr3L 21847526 21847568 11 114 5.0 0.5 2.8 2.9 158 chr3L 21847410 intron mub + chr3L 21847489 intron mub + chr3L 21847568 intron mub + chr3L_11_21845001 chr3L_21845001 RAL-837 1821 chr3L 21868547 21868595 chr3L 21868657 21868703 18 107 2.5 5.0 3.8 3.8 156 chr3L 21868547 intron mub + chr3L 21868625 intron mub + chr3L 21868703 intron mub + chr3L_18_21865001 chr3L_21865001 RAL-837 1822 chr3L 21872408 21872455 chr3L 21872507 21872554 14 97 3.5 2.0 2.8 3.7 146 chr3L 21872408 intron mub + chr3L 21872481 intron mub + chr3L 21872554 intron mub + chr3L_14_21870001 chr3L_21870001 RAL-837 1823 chr3L 21886370 21886417 chr3L 21886470 21886518 18 99 2.0 4.0 3.0 4.5 148 chr3L 21886370 intron,intron mub +,CR43878 - chr3L 21886444 intron,intron mub +,CR43878 - chr3L 21886518 intron,intron mub +,CR43878 - chr3L_18_21885001 chr3L_21885001 RAL-837 1824 chr3L 21950322 21950356 chr3L 21950419 21950431 15 90 4.5 2.5 3.5 3.3 109 chr3L 21950322 exon CG7448 + chr3L 21950376 exon CG7448 + chr3L 21950431 intron CG7448 + chr3L_15_21950001 chr3L_21950001 RAL-837 1825 chr3L 22010604 22010660 chr3L 22010773 22010805 9 161 5.5 3.0 4.2 1.7 201 chr3L 22010604 intergenic not near genes chr3L 22010704 intergenic not near genes chr3L 22010805 intergenic not near genes chr3L_9_22010001 chr3L_22010001 RAL-837 1826 chr3L 22023200 22023245 chr3L 22023312 22023344 7 106 4.5 2.5 3.5 1.6 144 chr3L 22023200 intergenic not near genes chr3L 22023272 intergenic not near genes chr3L 22023344 intergenic not near genes chr3L_7_22020001 chr3L_22020001 RAL-837 1827 chr3L 22031182 22031215 chr3L 22031475 22031486 9 290 6.5 1.0 3.8 1.9 304 chr3L 22031182 intergenic not near genes chr3L 22031334 intergenic not near genes chr3L 22031486 intergenic not near genes chr3L_9_22030001 chr3L_22030001 RAL-837 1828 chr3L 22033691 22033721 chr3L 22033774 22033819 12 89 2.0 6.0 4.0 2.4 128 chr3L 22033691 intergenic not near genes chr3L 22033755 intergenic not near genes chr3L 22033819 intergenic not near genes chr3L_12_22030001 chr3L_22030001 RAL-837 1829 chr3L 22041864 22041919 chr3L 22041962 22042017 16 95 4.0 3.5 3.8 3.3 153 chr3L 22041864 intron Oct-TyrR + chr3L 22041940 intron Oct-TyrR + chr3L 22042017 intron Oct-TyrR + chr3L_16_22040001 chr3L_22040001 RAL-837 1830 chr3L 22099658 22099678 chr3L 22105864 22105884 3S18 9 6204 7.5 3.5 5.5 1.4 6226 chr3L 22099658 intergenic not near genes chr3L 22102771 intergenic not near genes chr3L 22105884 intergenic not near genes chr3L_9_22100001 chr3L_22100001 RAL-837 1831 chr3L 22099679 22099702 chr3L 22105863 22105908 3S18 11 6204 4.5 3.5 4.0 2.2 6229 chr3L 22099679 intergenic not near genes chr3L 22102794 intergenic not near genes chr3L 22105908 intergenic not near genes chr3L_11_22100001 chr3L_22100001 RAL-837 1832 chr3L 22169462 22169486 chr3L 22169545 22169599 8 104 1.0 3.0 2.0 2.7 137 chr3L 22169462 intron olf413 + chr3L 22169530 intron olf413 + chr3L 22169599 intron olf413 + chr3L_8_22165001 chr3L_22165001 RAL-837 1833 chr3L 22328047 22328088 chr3L 22328160 22328198 8 110 3.5 5.5 4.5 1.5 151 chr3L 22328047 intron Ten-m - chr3L 22328122 intron Ten-m - chr3L 22328198 intron Ten-m - chr3L_8_22325001 chr3L_22325001 RAL-837 1834 chr3L 22333376 22333396 chr3L 22333476 22333492 7 115 1.0 3.5 2.2 2.2 116 chr3L 22333376 intron Ten-m - chr3L 22333434 intron Ten-m - chr3L 22333492 intron Ten-m - chr3L_7_22330001 chr3L_22330001 RAL-837 1835 chr3L 22423677 22423692 chr3L 22423770 22423790 7 96 5.0 3.0 4.0 1.4 113 chr3L 22423677 intergenic not near genes chr3L 22423734 intergenic not near genes chr3L 22423790 intergenic not near genes chr3L_7_22420001 chr3L_22420001 RAL-837 1836 chr3L 22441095 22441149 chr3L 22441217 22441271 24 113 8.5 3.0 5.8 3.5 176 chr3L 22441095 intergenic not near genes chr3L 22441183 intergenic not near genes chr3L 22441271 intergenic not near genes chr3L_24_22440001 chr3L_22440001 RAL-837 1837 chr3L 22555773 22555798 chr3L 22563238 22563243 blood 7 7469 2.5 2.0 2.2 2.2 7470 chr3L 22555773 intergenic not near genes chr3L 22559508 intergenic not near genes chr3L 22563243 intergenic not near genes chr3L_7_22555001 chr3L_22555001 RAL-837 1838 chr3L 22570418 22570450 chr3L 22570577 22570607 10 160 5.5 4.0 4.8 1.7 189 chr3L 22570418 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570607 intergenic not near genes chr3L_10_22570001 chr3L_22570001 RAL-837 1839 chr3L 22577608 22577646 chr3L 22582416 22582429 Doc 10 4800 3.5 5.0 4.2 1.9 4821 chr3L 22577608 intergenic not near genes chr3L 22580018 intergenic not near genes chr3L 22582429 3` UTR CG14459 - chr3L_10_22580001 chr3L_22580001 RAL-837 1840 chr3L 22617183 22617222 chr3L 22624645 22624674 blood 13 7464 3.0 3.5 3.2 3.1 7491 chr3L 22617183 intron CG14459 - chr3L 22620928 intron CG14459 - chr3L 22624674 intron CG14459 - chr3L_13_22620001 chr3L_22620001 RAL-837 1841 chr3L 22630723 22630771 chr3L 22630817 22630851 8 90 1.0 2.0 1.5 3.2 128 chr3L 22630723 intron CG14459 - chr3L 22630787 intron CG14459 - chr3L 22630851 intron CG14459 - chr3L_8_22630001 chr3L_22630001 RAL-837 1842 chr3L 22652306 22652350 chr3L 22652464 22652508 12 155 2.5 3.0 2.8 3.2 202 chr3L 22652306 exon CG33772 - chr3L 22652407 intron CG33772 - chr3L 22652508 exon CG33772 - chr3L_12_22650001 chr3L_22650001 RAL-837 1843 chr3L 22663153 22663197 chr3L 22663483 22663527 12 327 5.0 5.5 5.2 1.9 374 chr3L 22663153 intergenic not near genes chr3L 22663340 intergenic not near genes chr3L 22663527 intergenic not near genes chr3L_12_22660001 chr3L_22660001 RAL-837 1844 chr3L 22675899 22675919 chr3L 22675963 22675982 5 71 3.0 3.5 3.2 1.2 83 chr3L 22675899 intron CG14457 + chr3L 22675940 intron CG14457 + chr3L 22675982 intron CG14457 + chr3L_5_22675001 chr3L_22675001 RAL-837 1845 chr3L 22701610 22701629 chr3L 22701690 22701726 7 92 6.0 6.0 6.0 1.0 116 chr3L 22701610 intergenic not near genes chr3L 22701668 intergenic not near genes chr3L 22701726 intergenic not near genes chr3L_7_22700001 chr3L_22700001 RAL-837 1846 chr3L 22761368 22761416 chr3L 22766822 22766860 Ivk 11 5451 5.0 4.5 4.8 1.9 5492 chr3L 22761368 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766860 intron SPoCk + chr3L_11_22760001 chr3L_22760001 RAL-837 1847 chr3L 22838568 22838621 chr3L 22838669 22838682 16 97 0.5 4.5 2.5 4.6 114 chr3L 22838568 intergenic CG11226 + chr3L 22838625 intergenic CG11226 + chr3L 22838682 intergenic not near genes chr3L_16_22835001 chr3L_22835001 RAL-837 1848 chr3L 22865967 22865988 chr3L 22867120 22867140 Doc 5 1153 10.5 6.5 8.5 0.5 1173 chr3L 22865967 intron CG33170 + chr3L 22866554 intron CG33170 + chr3L 22867140 intron CG33170 + chr3L_5_22865001 chr3L_22865001 RAL-837 1849 chr3L 22865994 22866012 chr3L 22867118 22867151 Doc 4 1142 6.5 6.0 6.2 0.6 1157 chr3L 22865994 intron CG33170 + chr3L 22866572 intron CG33170 + chr3L 22867151 intron CG33170 + chr3L_4_22865001 chr3L_22865001 RAL-837 1850 chr3L 19220633 19220637 chr3L 22908066 22908066 8 3687431 19.0 18.0 18.5 0.4 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_8_21060001 chr3L_21060001 RAL-837 1851 chr3L 20525228 20525229 chr3L 22908066 22908066 4 2382838 10.0 18.0 14.0 0.3 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-837 1852 chr3L 19220633 19220636 chr3L 22908067 22908067 4 3687433 19.0 18.0 18.5 0.2 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-837 1853 chr3L 22949192 22949204 chr3L 22949287 22949312 5 105 11.5 3.5 7.5 0.6 120 chr3L 22949192 intron Mes2 + chr3L 22949252 intron Mes2 + chr3L 22949312 intron Mes2 + chr3L_5_22945001 chr3L_22945001 RAL-837 1854 chr3L 22980568 22980577 chr3L 22980673 22980682 4 105 4.0 2.5 3.2 1.0 114 chr3L 22980568 intergenic not near genes chr3L 22980625 intergenic not near genes chr3L 22980682 intergenic not near genes chr3L_4_22980001 chr3L_22980001 RAL-837 1855 chr3L 22989845 22989889 chr3L 22996839 22996883 297 5 6990 5.5 5.5 5.5 0.8 7038 chr3L 22989845 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996883 intergenic not near genes chr3L_5_22990001 chr3L_22990001 RAL-837 1856 chr3L 23088107 23088139 chr3L 23088221 23088264 4 120 8.0 3.5 5.8 0.6 157 chr3L 23088107 intergenic not near genes chr3L 23088186 intergenic not near genes chr3L 23088264 intergenic not near genes chr3L_4_23085001 chr3L_23085001 RAL-837 1857 chr3L 23101294 23101297 chr3L 23101497 23101528 4 224 4.5 4.0 4.2 0.8 234 chr3L 23101294 intron CkIIalpha + chr3L 23101411 intron CkIIalpha + chr3L 23101528 intron CkIIalpha + chr3L_4_23100001 chr3L_23100001 RAL-837 1858 chr3L 23182823 23182850 chr3L 23182902 23182946 18 92 3.0 12.5 7.8 2.0 123 chr3L 23182823 intron CG34031 + chr3L 23182884 intron CG34031 + chr3L 23182946 intron CG34031 + chr3L_18_23180001 chr3L_23180001 RAL-837 1859 chr3L 23205289 23205343 chr3L 23205706 23205715 INE-1 6 406 4.0 2.0 3.0 1.5 426 chr3L 23205289 intergenic not near genes chr3L 23205502 intergenic not near genes chr3L 23205715 intergenic not near genes chr3L_6_23205001 chr3L_23205001 RAL-837 1860 chr3L 23230548 23230595 chr3L 23230655 23230683 10 99 4.5 3.5 4.0 2.0 135 chr3L 23230548 intron nAChRalpha4 + chr3L 23230616 intron nAChRalpha4 + chr3L 23230683 intron nAChRalpha4 + chr3L_10_23230001 chr3L_23230001 RAL-837 1861 chr3L 23290494 23290512 chr3L 23295315 23295365 X-element 11 4844 5.0 6.0 5.5 1.7 4871 chr3L 23290494 intergenic not near genes chr3L 23292930 intergenic not near genes chr3L 23295365 intergenic not near genes chr3L_11_23290001 chr3L_23290001 RAL-837 1862 chr3L 23325237 23325276 chr3L 23325377 23325416 15 138 4.5 3.0 3.8 3.1 179 chr3L 23325237 intron alpha-Cat - chr3L 23325326 intron alpha-Cat - chr3L 23325416 intron alpha-Cat - chr3L_15_23325001 chr3L_23325001 RAL-837 1863 chr3L 23468009 23468026 chr3L 23468156 23468173 5 147 17.5 26.0 21.8 0.2 164 chr3L 23468009 intergenic not near genes chr3L 23468091 intergenic not near genes chr3L 23468173 intergenic not near genes chr3L_5_23465001 chr3L_23465001 RAL-837 1864 chr3L 23750781 23750820 chr3L 23750879 23750918 11 96 1.0 3.5 2.2 3.4 137 chr3L 23750781 intergenic not near genes chr3L 23750850 intergenic not near genes chr3L 23750918 intergenic not near genes chr3L_11_23750001 chr3L_23750001 RAL-837 1865 chr3L 23750933 23750950 chr3L 23751114 23751156 6 185 23.5 22.0 22.8 0.3 223 chr3L 23750933 intergenic not near genes chr3L 23751044 intergenic not near genes chr3L 23751156 intergenic not near genes chr3L_6_23750001 chr3L_23750001 RAL-837 1866 chr3L 24012413 24012431 chr3L 24020754 24020782 roo 4 8349 7.0 8.5 7.8 0.5 8369 chr3L 24012413 intergenic not near genes chr3L 24016598 intergenic not near genes chr3L 24020782 intergenic not near genes chr3L_4_24015001 chr3L_24015001 RAL-837 1867 chr3L 24168813 24168822 chr3L 24176129 24176170 ZAM 5 7336 0.5 4.5 2.5 1.4 7357 chr3L 24168813 intron Snap25 + chr3L 24172492 intron Snap25 + chr3L 24176170 intron Snap25 + chr3L_5_24170001 chr3L_24170001 RAL-837 1868 chr3L 24297946 24297975 chr3L 24298072 24298118 7 132 17.5 24.5 21.0 0.3 172 chr3L 24297946 3` UTR Snap25 + chr3L 24298032 3` UTR Snap25 + chr3L 24298118 3` UTR Snap25 + chr3L_7_24295001 chr3L_24295001 RAL-837 1869 chr3L 24791890 24791919 chr3L 24796689 24796702 Doc 7 4797 1.0 4.0 2.5 2.0 4812 chr3L 24791890 intergenic not near genes chr3L 24794296 intergenic not near genes chr3L 24796702 intergenic not near genes chr3L_7_24790001 chr3L_24790001 RAL-837 1870 chr3L 18198930 18198931 chr3L 24821492 24821493 7 6622562 0.0 11.5 5.8 1.0 6622563 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-837 1871 chr3L 25343236 25343286 chr3L 25343640 25343690 14 403 1.0 2.5 1.8 5.0 454 chr3L 25343236 intergenic not near genes chr3L 25343463 intergenic not near genes chr3L 25343690 intergenic not near genes chr3L_14_25340001 chr3L_25340001 RAL-837 1872 chr3L 26026706 26026755 chr3L 26026816 26026865 5 110 25.0 25.5 25.2 0.2 159 chr3L 26026706 intergenic not near genes chr3L 26026786 intergenic not near genes chr3L 26026865 intergenic not near genes chr3L_5_26025001 chr3L_26025001 RAL-837 1873 chr3L 27980693 27980726 chr3L 27985493 27985541 Doc 9 4811 5.5 5.0 5.2 1.5 4848 chr3L 27980693 intron CG17514 - chr3L 27983117 intron CG17514 - chr3L 27985541 intron CG17514 - chr3L_9_27980001 chr3L_27980001 RAL-837 1874 chr3R 1521047 1521064 chr3R 1521158 1521178 7 114 3.5 4.0 3.8 1.5 131 chr3R 1521047 intergenic not near genes chr3R 1521112 intergenic not near genes chr3R 1521178 intergenic not near genes chr3R_7_1520001 chr3R_1520001 RAL-837 1875 chr3R 2534118 2534152 chr3R 2541707 2541741 6 7589 9.5 10.5 10.0 0.5 7623 chr3R 2534118 intergenic not near genes chr3R 2537930 intergenic not near genes chr3R 2541741 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-837 1876 chr3R 2534155 2534166 chr3R 2541703 2541745 5 7572 7.0 10.0 8.5 0.5 7590 chr3R 2534155 intergenic not near genes chr3R 2537950 intergenic not near genes chr3R 2541745 intergenic not near genes chr3R_5_2535001 chr3R_2535001 RAL-837 1877 chr3R 4105050 4105063 chr3R 4110240 4110287 copia 4 5216 4.0 2.0 3.0 1.0 5237 chr3R 4105050 intergenic not near genes chr3R 4107668 intergenic not near genes chr3R 4110287 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-837 1878 chr3R 4130247 4130297 chr3R 4130356 4130406 5 108 4.0 1.5 2.8 1.3 159 chr3R 4130247 intron Gfat1 + chr3R 4130326 intron Gfat1 + chr3R 4130406 intron Gfat1 + chr3R_5_4130001 chr3R_4130001 RAL-837 1879 chr3R 4132886 4132928 chr3R 4133060 4133102 11 173 2.0 1.5 1.8 3.9 216 chr3R 4132886 5` UTR Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133102 intron Gfat1 + chr3R_11_4130001 chr3R_4130001 RAL-837 1880 chr3R 4206057 4206101 chr3R 4211644 4211696 mdg3 10 5591 5.0 3.5 4.2 1.9 5639 chr3R 4206057 intron CG14636 - chr3R 4208876 intron CG14636 - chr3R 4211696 intron CG14636 - chr3R_10_4205001 chr3R_4205001 RAL-837 1881 chr3R 4366746 4366750 chr3R 4375149 4375153 roo 4 8403 10.5 4.0 7.2 0.5 8407 chr3R 4366746 3` UTR CG1090 + chr3R 4370950 intergenic not near genes chr3R 4375153 5` UTR CR44922 + chr3R_4_4370001 chr3R_4370001 RAL-837 1882 chr3R 4366751 4366756 chr3R 4375144 4375144 roo 5 8398 9.0 4.0 6.5 0.7 8393 chr3R 4366751 3` UTR CG1090 + chr3R 4370948 intergenic not near genes chr3R 4375144 5` UTR CR44922 + chr3R_5_4370001 chr3R_4370001 RAL-837 1883 chr3R 4366760 4366790 chr3R 4375140 4375142 roo 11 8394 4.0 3.0 3.5 2.4 8382 chr3R 4366760 3` UTR CG1090 + chr3R 4370951 intergenic not near genes chr3R 4375142 5` UTR CR44922 + chr3R_11_4370001 chr3R_4370001 RAL-837 1884 chr3R 4408393 4408435 chr3R 4412717 4412759 Juan 9 4320 5.5 8.0 6.8 1.2 4366 chr3R 4408393 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412759 intron CG32944 - chr3R_9_4410001 chr3R_4410001 RAL-837 1885 chr3R 4408439 4408444 chr3R 4412715 4412735 Juan 4 4291 4.0 7.5 5.8 0.6 4296 chr3R 4408439 intron CG32944 - chr3R 4410587 intron CG32944 - chr3R 4412735 intron CG32944 - chr3R_4_4410001 chr3R_4410001 RAL-837 1886 chr3R 4554506 4554548 chr3R 4554633 4554680 12 128 2.5 5.0 3.8 2.5 174 chr3R 4554506 intron CG34357 - chr3R 4554593 intron CG34357 - chr3R 4554680 intron CG34357 - chr3R_12_4550001 chr3R_4550001 RAL-837 1887 chr3R 4561887 4561934 chr3R 4561984 4562027 11 91 5.0 5.5 5.2 1.8 140 chr3R 4561887 intergenic not near genes chr3R 4561957 intergenic not near genes chr3R 4562027 intergenic not near genes chr3R_11_4560001 chr3R_4560001 RAL-837 1888 chr3R 4594575 4594618 chr3R 4595358 4595411 12 785 2.0 3.0 2.5 3.4 836 chr3R 4594575 intergenic not near genes chr3R 4594993 intergenic not near genes chr3R 4595411 intergenic not near genes chr3R_12_4590001 chr3R_4590001 RAL-837 1889 chr3R 4609528 4609578 chr3R 4610712 4610762 1360 19 1181 4.5 4.0 4.2 3.7 1234 chr3R 4609528 intergenic not near genes chr3R 4610145 intergenic not near genes chr3R 4610762 intergenic not near genes chr3R_19_4610001 chr3R_4610001 RAL-837 1890 chr3R 4657288 4657292 chr3R 4657387 4657401 4 104 10.0 6.0 8.0 0.4 113 chr3R 4657288 intron spartin + chr3R 4657344 intron spartin + chr3R 4657401 intron spartin + chr3R_4_4655001 chr3R_4655001 RAL-837 1891 chr3R 4657297 4657315 chr3R 4657385 4657413 10 102 5.5 5.5 5.5 1.5 116 chr3R 4657297 intron spartin + chr3R 4657355 intron spartin + chr3R 4657413 intron spartin + chr3R_10_4655001 chr3R_4655001 RAL-837 1892 chr3R 4665057 4665106 chr3R 4665157 4665181 7 91 3.0 3.0 3.0 1.8 124 chr3R 4665057 intron CG43427 + chr3R 4665119 intron CG43427 + chr3R 4665181 intron CG43427 + chr3R_7_4665001 chr3R_4665001 RAL-837 1893 chr3R 4686644 4686691 chr3R 4695070 4695121 INE-1 19 8427 28.0 40.0 34.0 0.5 8477 chr3R 4686644 intron CG43427 + chr3R 4690882 intron CG43427 + chr3R 4695121 intron CG43427 + chr3R_19_4690001 chr3R_4690001 RAL-837 1894 chr3R 4753226 4753267 chr3R 4757548 4757575 F-element 10 4317 4.5 5.5 5.0 1.7 4349 chr3R 4753226 intron,intron atms +,CG44098 - chr3R 4755400 intron,intron atms +,CG44098 - chr3R 4757575 intron,exon atms +,CG44098 - chr3R_10_4755001 chr3R_4755001 RAL-837 1895 chr3R 4769139 4769187 chr3R 4769237 4769285 15 95 3.0 5.0 4.0 3.0 146 chr3R 4769139 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769285 intron,intron atms +,CG44098 - chr3R_15_4765001 chr3R_4765001 RAL-837 1896 chr3R 4770238 4770278 chr3R 4770333 4770361 7 95 1.5 3.0 2.2 2.2 123 chr3R 4770238 intron,intron atms +,CG44098 - chr3R 4770300 intron,intron atms +,CG44098 - chr3R 4770361 intron,intron atms +,CG44098 - chr3R_7_4770001 chr3R_4770001 RAL-837 1897 chr3R 4861549 4861595 chr3R 4861650 4861685 8 97 2.5 3.5 3.0 2.0 136 chr3R 4861549 intron opa + chr3R 4861617 intron opa + chr3R 4861685 intron opa + chr3R_8_4860001 chr3R_4860001 RAL-837 1898 chr3R 4872223 4872268 chr3R 4872333 4872378 8 109 3.5 5.5 4.5 1.5 155 chr3R 4872223 intergenic not near genes chr3R 4872300 intergenic not near genes chr3R 4872378 intergenic not near genes chr3R_8_4870001 chr3R_4870001 RAL-837 1899 chr3R 4887462 4887508 chr3R 4894859 4894868 rover 6 7387 3.5 3.0 3.2 1.4 7406 chr3R 4887462 intergenic not near genes chr3R 4891165 intergenic not near genes chr3R 4894868 intergenic not near genes chr3R_6_4890001 chr3R_4890001 RAL-837 1900 chr3R 4896272 4896277 chr3R 4896385 4896386 4 112 11.0 2.0 6.5 0.5 114 chr3R 4896272 intergenic CR45580 + chr3R 4896329 intergenic CR45580 + chr3R 4896386 intergenic CR45580 + chr3R_4_4895001 chr3R_4895001 RAL-837 1901 chr3R 4896280 4896320 chr3R 4896384 4896427 10 105 4.0 1.5 2.8 2.6 147 chr3R 4896280 intergenic CR45580 + chr3R 4896354 intergenic CR45580 + chr3R 4896427 5` UTR CR45580 + chr3R_10_4895001 chr3R_4895001 RAL-837 1902 chr3R 4965999 4966023 chr3R 4966101 4966135 7 108 6.0 2.5 4.2 1.3 136 chr3R 4965999 intron CG1124 + chr3R 4966067 intron CG1124 + chr3R 4966135 intron CG1124 + chr3R_7_4965001 chr3R_4965001 RAL-837 1903 chr3R 4981392 4981442 chr3R 4981491 4981533 7 91 1.5 3.0 2.2 2.2 141 chr3R 4981392 intergenic not near genes chr3R 4981462 intergenic not near genes chr3R 4981533 intergenic CG14662 - chr3R_7_4980001 chr3R_4980001 RAL-837 1904 chr3R 4984279 4984332 chr3R 4984391 4984444 15 107 3.5 4.0 3.8 3.1 165 chr3R 4984279 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984362 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984444 intergenic CR43424 -,CG14662 - chr3R_15_4980001 chr3R_4980001 RAL-837 1905 chr3R 5045826 5045876 chr3R 5052948 5052998 HMS-Beagle 19 7121 5.5 5.0 5.2 3.1 7172 chr3R 5045826 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052998 intergenic CR45588 - chr3R_19_5045001 chr3R_5045001 RAL-837 1906 chr3R 5067961 5068013 chr3R 5073498 5073550 mdg3 18 5535 6.0 8.5 7.2 2.2 5589 chr3R 5067961 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073550 intergenic not near genes chr3R_18_5070001 chr3R_5070001 RAL-837 1907 chr3R 5159505 5159541 chr3R 5159607 5159654 9 108 2.0 6.5 4.2 1.7 149 chr3R 5159505 intron dpr16 + chr3R 5159580 intron dpr16 + chr3R 5159654 intron,5` UTR dpr16 +,CG12590 + chr3R_9_5155001 chr3R_5155001 RAL-837 1908 chr3R 5162918 5162965 chr3R 5163090 5163137 10 168 6.0 6.0 6.0 1.4 219 chr3R 5162918 intron dpr16 + chr3R 5163028 intron dpr16 + chr3R 5163137 intron dpr16 + chr3R_10_5160001 chr3R_5160001 RAL-837 1909 chr3R 5287401 5287407 chr3R 5287825 5287831 6 423 3.0 7.0 5.0 1.0 430 chr3R 5287401 intron mtd - chr3R 5287616 intron mtd - chr3R 5287831 intron mtd - chr3R_6_5285001 chr3R_5285001 RAL-837 1910 chr3R 5287408 5287412 chr3R 5287824 5287836 4 422 3.0 6.5 4.8 0.7 428 chr3R 5287408 intron mtd - chr3R 5287622 intron mtd - chr3R 5287836 intron mtd - chr3R_4_5285001 chr3R_5285001 RAL-837 1911 chr3R 5287415 5287427 chr3R 5287809 5287851 6 416 2.5 4.0 3.2 1.4 436 chr3R 5287415 intron mtd - chr3R 5287633 intron mtd - chr3R 5287851 intron mtd - chr3R_6_5285001 chr3R_5285001 RAL-837 1912 chr3R 5338386 5338398 chr3R 5343575 5343595 Rt1c 7 5192 9.5 4.5 7.0 0.9 5209 chr3R 5338386 intron mtd - chr3R 5340990 intron mtd - chr3R 5343595 intron mtd - chr3R_7_5340001 chr3R_5340001 RAL-837 1913 chr3R 5338400 5338407 chr3R 5343572 5343604 Rt1c 4 5191 8.5 4.0 6.2 0.6 5204 chr3R 5338400 intron mtd - chr3R 5341002 intron mtd - chr3R 5343604 intron mtd - chr3R_4_5340001 chr3R_5340001 RAL-837 1914 chr3R 5351610 5351660 chr3R 5351714 5351764 8 104 2.0 5.0 3.5 1.8 154 chr3R 5351610 intergenic not near genes chr3R 5351687 intergenic not near genes chr3R 5351764 intergenic not near genes chr3R_8_5350001 chr3R_5350001 RAL-837 1915 chr3R 5353081 5353132 chr3R 5353308 5353349 16 221 6.0 7.0 6.5 2.1 268 chr3R 5353081 intergenic not near genes chr3R 5353215 intergenic not near genes chr3R 5353349 intergenic CG11999 - chr3R_16_5350001 chr3R_5350001 RAL-837 1916 chr3R 5385953 5386006 chr3R 5386144 5386187 14 186 3.5 4.0 3.8 2.9 234 chr3R 5385953 intron kkv - chr3R 5386070 intron kkv - chr3R 5386187 intron kkv - chr3R_14_5385001 chr3R_5385001 RAL-837 1917 chr3R 5388556 5388568 chr3R 5388652 5388664 9 96 9.5 5.0 7.2 1.1 108 chr3R 5388556 intron kkv - chr3R 5388610 intron kkv - chr3R 5388664 intron kkv - chr3R_9_5385001 chr3R_5385001 RAL-837 1918 chr3R 5388571 5388589 chr3R 5388651 5388685 10 91 6.0 5.0 5.5 1.5 114 chr3R 5388571 intron kkv - chr3R 5388628 intron kkv - chr3R 5388685 intron kkv - chr3R_10_5385001 chr3R_5385001 RAL-837 1919 chr3R 5431360 5431409 chr3R 5431466 5431477 6 89 3.5 4.0 3.8 1.2 117 chr3R 5431360 intron CG14669 + chr3R 5431418 intron CG14669 + chr3R 5431477 intron CG14669 + chr3R_6_5430001 chr3R_5430001 RAL-837 1920 chr3R 5445956 5445968 chr3R 5452436 5452448 Burdock 4 6480 4.5 5.0 4.8 0.7 6492 chr3R 5445956 intron CG14669 + chr3R 5449202 intron CG14669 + chr3R 5452448 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-837 1921 chr3R 5445970 5445986 chr3R 5452423 5452466 Burdock 4 6472 3.5 2.0 2.8 1.1 6496 chr3R 5445970 intron CG14669 + chr3R 5449218 intron CG14669 + chr3R 5452466 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-837 1922 chr3R 5502273 5502298 chr3R 5502607 5502607 4 323 3.5 6.0 4.8 0.7 334 chr3R 5502273 exon CG31547 - chr3R 5502440 5` UTR CG31547 - chr3R 5502607 5` UTR CG31547 - chr3R_4_5500001 chr3R_5500001 RAL-837 1923 chr3R 5506819 5506868 chr3R 5506971 5507020 14 151 3.5 5.5 4.5 2.5 201 chr3R 5506819 intergenic not near genes chr3R 5506920 intergenic not near genes chr3R 5507020 intergenic not near genes chr3R_14_5505001 chr3R_5505001 RAL-837 1924 chr3R 5523886 5523940 chr3R 5523988 5523996 16 94 3.5 4.0 3.8 3.3 110 chr3R 5523886 intron Itp-r83A + chr3R 5523941 intron Itp-r83A + chr3R 5523996 intron Itp-r83A + chr3R_16_5520001 chr3R_5520001 RAL-837 1925 chr3R 5745999 5746045 chr3R 5746260 5746306 pogo 16 257 2.0 4.0 3.0 4.0 307 chr3R 5745999 3` UTR Madm + chr3R 5746152 3` UTR Madm + chr3R 5746306 3` UTR Madm + chr3R_16_5745001 chr3R_5745001 RAL-837 1926 chr3R 5747018 5747022 chr3R 5753218 5753233 diver 4 6208 5.5 4.0 4.8 0.7 6215 chr3R 5747018 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753233 intergenic CG2091 - chr3R_4_5750001 chr3R_5750001 RAL-837 1927 chr3R 5747028 5747046 chr3R 5753208 5753240 diver 6 6202 2.0 3.0 2.5 1.7 6212 chr3R 5747028 intergenic Madm + chr3R 5750134 intergenic not near genes chr3R 5753240 intergenic CG2091 - chr3R_6_5750001 chr3R_5750001 RAL-837 1928 chr3R 5769218 5769265 chr3R 5769336 5769350 14 113 4.5 5.5 5.0 2.3 132 chr3R 5769218 intron CG2082 - chr3R 5769284 intron CG2082 - chr3R 5769350 intron CG2082 - chr3R_14_5765001 chr3R_5765001 RAL-837 1929 chr3R 5772358 5772381 chr3R 5772536 5772559 8 177 7.0 5.0 6.0 1.1 201 chr3R 5772358 intron CG2082 - chr3R 5772458 intron CG2082 - chr3R 5772559 intron CG2082 - chr3R_8_5770001 chr3R_5770001 RAL-837 1930 chr3R 5772386 5772408 chr3R 5772534 5772564 10 170 2.5 5.0 3.8 2.1 178 chr3R 5772386 intron CG2082 - chr3R 5772475 intron CG2082 - chr3R 5772564 intron CG2082 - chr3R_10_5770001 chr3R_5770001 RAL-837 1931 chr3R 5809106 5809136 chr3R 5809367 5809372 pogo 9 258 4.5 6.5 5.5 1.4 266 chr3R 5809106 3` UTR CG11000 + chr3R 5809239 3` UTR CG11000 + chr3R 5809372 3` UTR CG11000 + chr3R_9_5805001 chr3R_5805001 RAL-837 1932 chr3R 5822364 5822393 chr3R 5823550 5823555 1360 11 1182 5.0 3.0 4.0 2.2 1191 chr3R 5822364 3` UTR CG2023 - chr3R 5822960 3` UTR CG2023 - chr3R 5823555 3` UTR CG2023 - chr3R_11_5820001 chr3R_5820001 RAL-837 1933 chr3R 5822394 5822404 chr3R 5823544 5823591 1360 6 1178 2.5 2.0 2.2 1.9 1197 chr3R 5822394 3` UTR CG2023 - chr3R 5822992 3` UTR CG2023 - chr3R 5823591 3` UTR CG2023 - chr3R_6_5820001 chr3R_5820001 RAL-837 1934 chr3R 5927546 5927578 chr3R 5927806 5927838 pogo 9 260 4.0 7.0 5.5 1.4 292 chr3R 5927546 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927838 intron CG34113 - chr3R_9_5925001 chr3R_5925001 RAL-837 1935 chr3R 6015953 6015980 chr3R 6024454 6024481 Tirant 4 8501 4.5 3.5 4.0 0.8 8528 chr3R 6015953 intergenic not near genes chr3R 6020217 intergenic not near genes chr3R 6024481 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-837 1936 chr3R 6110556 6110584 chr3R 6110862 6110890 4 303 5.0 4.0 4.5 0.7 334 chr3R 6110556 intron Obp83ef - chr3R 6110723 intron Obp83ef - chr3R 6110890 intron Obp83ef - chr3R_4_6110001 chr3R_6110001 RAL-837 1937 chr3R 6117417 6117438 chr3R 6117553 6117578 6 138 2.5 8.0 5.2 1.0 161 chr3R 6117417 intergenic not near genes chr3R 6117498 intergenic not near genes chr3R 6117578 intergenic not near genes chr3R_6_6115001 chr3R_6115001 RAL-837 1938 chr3R 6158502 6158541 chr3R 6167105 6167121 Tirant 9 8597 3.5 5.0 4.2 1.7 8619 chr3R 6158502 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167121 intergenic CG1077 + chr3R_9_6160001 chr3R_6160001 RAL-837 1939 chr3R 6175165 6175205 chr3R 6182457 6182489 HMS-Beagle2 8 7282 2.5 3.5 3.0 2.0 7324 chr3R 6175165 intergenic Osi1 + chr3R 6178827 intron CR45194 + chr3R 6182489 intergenic CR45194 + chr3R_8_6175001 chr3R_6175001 RAL-837 1940 chr3R 6191152 6191198 chr3R 6191252 6191296 15 96 4.0 5.5 4.8 2.6 144 chr3R 6191152 intron NPFR + chr3R 6191224 intron NPFR + chr3R 6191296 intron NPFR + chr3R_15_6190001 chr3R_6190001 RAL-837 1941 chr3R 6206274 6206294 chr3R 6206511 6206531 BS 5 237 10.0 8.0 9.0 0.5 257 chr3R 6206274 exon Osi24 + chr3R 6206402 intron Osi24 + chr3R 6206531 intron Osi24 + chr3R_5_6205001 chr3R_6205001 RAL-837 1942 chr3R 6206301 6206318 chr3R 6206497 6206540 BS 4 222 7.0 5.0 6.0 0.6 239 chr3R 6206301 exon Osi24 + chr3R 6206420 intron Osi24 + chr3R 6206540 intron Osi24 + chr3R_4_6205001 chr3R_6205001 RAL-837 1943 chr3R 6415205 6415235 chr3R 6415321 6415336 4 112 3.5 2.0 2.8 1.1 131 chr3R 6415205 intron gpp + chr3R 6415270 intron gpp + chr3R 6415336 intron gpp + chr3R_4_6415001 chr3R_6415001 RAL-837 1944 chr3R 6415237 6415253 chr3R 6415320 6415369 6 105 2.0 2.0 2.0 2.0 132 chr3R 6415237 intron gpp + chr3R 6415303 intron gpp + chr3R 6415369 intron gpp + chr3R_6_6415001 chr3R_6415001 RAL-837 1945 chr3R 6461557 6461613 chr3R 6461658 6461712 11 98 2.5 3.0 2.8 2.9 155 chr3R 6461557 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461712 intergenic not near genes chr3R_11_6460001 chr3R_6460001 RAL-837 1946 chr3R 6510002 6510057 chr3R 6515103 6515103 jockey 14 5088 3.0 4.0 3.5 3.1 5101 chr3R 6510002 intergenic not near genes chr3R 6512552 intergenic not near genes chr3R 6515103 intergenic not near genes chr3R_14_6510001 chr3R_6510001 RAL-837 1947 chr3R 6578868 6578890 chr3R 6579008 6579030 5 140 6.5 4.0 5.2 0.8 162 chr3R 6578868 intron dpr11 - chr3R 6578949 intron dpr11 - chr3R 6579030 intron dpr11 - chr3R_5_6575001 chr3R_6575001 RAL-837 1948 chr3R 6578899 6578916 chr3R 6579002 6579010 6 117 3.5 4.0 3.8 1.2 111 chr3R 6578899 intron dpr11 - chr3R 6578954 intron dpr11 - chr3R 6579010 intron dpr11 - chr3R_6_6575001 chr3R_6575001 RAL-837 1949 chr3R 6587256 6587297 chr3R 6587350 6587369 10 92 2.0 2.5 2.2 3.1 113 chr3R 6587256 intron dpr11 - chr3R 6587312 intron dpr11 - chr3R 6587369 intron dpr11 - chr3R_10_6585001 chr3R_6585001 RAL-837 1950 chr3R 6737507 6737531 chr3R 6739289 6739320 Doc 7 1795 1.5 0.0 0.8 3.9 1813 chr3R 6737507 intron pb - chr3R 6738414 intron pb - chr3R 6739320 intron pb - chr3R_7_6735001 chr3R_6735001 RAL-837 1951 chr3R 6781899 6781954 chr3R 6782006 6782061 20 104 1.0 4.0 2.5 5.7 162 chr3R 6781899 intergenic not near genes chr3R 6781980 intergenic not near genes chr3R 6782061 intergenic not near genes chr3R_20_6780001 chr3R_6780001 RAL-837 1952 chr3R 6807241 6807250 chr3R 6807343 6807352 5 102 7.0 2.5 4.8 0.9 111 chr3R 6807241 intergenic not near genes chr3R 6807296 intergenic not near genes chr3R 6807352 intergenic not near genes chr3R_5_6805001 chr3R_6805001 RAL-837 1953 chr3R 6807258 6807291 chr3R 6807342 6807393 11 95 4.0 2.0 3.0 2.8 135 chr3R 6807258 intergenic not near genes chr3R 6807326 intergenic not near genes chr3R 6807393 intergenic not near genes chr3R_11_6805001 chr3R_6805001 RAL-837 1954 chr3R 6862207 6862252 chr3R 6862314 6862334 9 103 4.0 6.0 5.0 1.5 127 chr3R 6862207 intergenic not near genes chr3R 6862270 intergenic not near genes chr3R 6862334 intergenic not near genes chr3R_9_6860001 chr3R_6860001 RAL-837 1955 chr3R 6905514 6905562 chr3R 6905614 6905664 12 100 3.5 3.5 3.5 2.7 150 chr3R 6905514 intron Antp - chr3R 6905589 intron Antp - chr3R 6905664 intron Antp - chr3R_12_6905001 chr3R_6905001 RAL-837 1956 chr3R 6918042 6918089 chr3R 6918140 6918174 5 94 2.5 1.0 1.8 1.8 132 chr3R 6918042 intron Antp - chr3R 6918108 intron Antp - chr3R 6918174 intron Antp - chr3R_5_6915001 chr3R_6915001 RAL-837 1957 chr3R 7002637 7002686 chr3R 7002733 7002782 6 96 1.5 3.5 2.5 1.7 145 chr3R 7002637 intergenic not near genes chr3R 7002710 intergenic not near genes chr3R 7002782 intergenic not near genes chr3R_6_7000001 chr3R_7000001 RAL-837 1958 chr3R 7026847 7026884 chr3R 7026953 7026990 9 100 3.0 3.0 3.0 2.2 143 chr3R 7026847 intergenic not near genes chr3R 7026918 intergenic not near genes chr3R 7026990 intergenic not near genes chr3R_9_7025001 chr3R_7025001 RAL-837 1959 chr3R 7060757 7060769 chr3R 7060834 7060852 5 94 6.5 5.5 6.0 0.7 95 chr3R 7060757 intergenic djl +,dj + chr3R 7060804 5` UTR djl + chr3R 7060852 5` UTR djl + chr3R_5_7060001 chr3R_7060001 RAL-837 1960 chr3R 7089032 7089070 chr3R 7089122 7089148 8 90 2.0 4.5 3.2 1.9 116 chr3R 7089032 intergenic alphaTub84B + chr3R 7089090 intergenic alphaTub84B + chr3R 7089148 intergenic alphaTub84B + chr3R_8_7085001 chr3R_7085001 RAL-837 1961 chr3R 7092398 7092450 chr3R 7092561 7092588 20 157 3.5 3.5 3.5 4.4 190 chr3R 7092398 3` UTR CR43685 - chr3R 7092493 3` UTR CR43685 - chr3R 7092588 3` UTR CR43685 - chr3R_20_7090001 chr3R_7090001 RAL-837 1962 chr3R 7103274 7103317 chr3R 7103364 7103376 14 86 4.0 5.0 4.5 2.5 102 chr3R 7103274 intron Alh - chr3R 7103325 intron Alh - chr3R 7103376 intron Alh - chr3R_14_7100001 chr3R_7100001 RAL-837 1963 chr3R 7126483 7126534 chr3R 7126598 7126649 22 113 3.0 2.5 2.8 5.8 166 chr3R 7126483 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126649 3` UTR CG10068 - chr3R_22_7125001 chr3R_7125001 RAL-837 1964 chr3R 7161825 7161847 chr3R 7161978 7162000 8 153 2.5 0.0 1.2 3.6 175 chr3R 7161825 intergenic not near genes chr3R 7161912 intergenic not near genes chr3R 7162000 intergenic not near genes chr3R_8_7160001 chr3R_7160001 RAL-837 1965 chr3R 7173663 7173707 chr3R 7173763 7173807 15 97 3.5 3.5 3.5 3.3 144 chr3R 7173663 intron sas + chr3R 7173735 intron sas + chr3R 7173807 intron sas + chr3R_15_7170001 chr3R_7170001 RAL-837 1966 chr3R 7210610 7210616 chr3R 7210681 7210687 5 77 0.0 7.0 3.5 1.1 77 chr3R 7210610 intergenic not near genes chr3R 7210648 intergenic not near genes chr3R 7210687 intergenic not near genes chr3R_5_7210001 chr3R_7210001 RAL-837 1967 chr3R 7217442 7217487 chr3R 7217683 7217728 18 241 3.0 4.5 3.8 3.8 286 chr3R 7217442 intergenic CG14605 -,CG14606 - chr3R 7217585 intergenic CG14605 - chr3R 7217728 3` UTR CG14605 - chr3R_18_7215001 chr3R_7215001 RAL-837 1968 chr3R 7511745 7511789 chr3R 7511846 7511890 18 95 3.0 5.0 4.0 3.6 145 chr3R 7511745 intron alpha-Est8 - chr3R 7511818 intron alpha-Est8 - chr3R 7511890 intron alpha-Est8 - chr3R_18_7510001 chr3R_7510001 RAL-837 1969 chr3R 7551337 7551368 chr3R 7551451 7551469 5 111 4.0 0.5 2.2 1.6 132 chr3R 7551337 intergenic not near genes chr3R 7551403 intergenic not near genes chr3R 7551469 intergenic not near genes chr3R_5_7550001 chr3R_7550001 RAL-837 1970 chr3R 7551369 7551384 chr3R 7551450 7551498 5 100 1.5 0.5 1.0 2.5 129 chr3R 7551369 intergenic not near genes chr3R 7551434 intergenic not near genes chr3R 7551498 intergenic not near genes chr3R_5_7550001 chr3R_7550001 RAL-837 1971 chr3R 7621531 7621563 chr3R 7621642 7621648 7 104 1.5 4.5 3.0 1.8 117 chr3R 7621531 intron CG34127 - chr3R 7621590 intron CG34127 - chr3R 7621648 intron CG34127 - chr3R_7_7620001 chr3R_7620001 RAL-837 1972 chr3R 7665898 7665948 chr3R 7666007 7666057 8 102 2.0 4.0 3.0 2.0 159 chr3R 7665898 intron Nlg1 + chr3R 7665978 intron Nlg1 + chr3R 7666057 intron Nlg1 + chr3R_8_7665001 chr3R_7665001 RAL-837 1973 chr3R 7677896 7677934 chr3R 7678029 7678049 8 129 3.0 2.0 2.5 2.3 153 chr3R 7677896 intron Nlg1 + chr3R 7677972 intron Nlg1 + chr3R 7678049 intron Nlg1 + chr3R_8_7675001 chr3R_7675001 RAL-837 1974 chr3R 7694574 7694610 chr3R 7713638 7713686 invader3 10 19077 2.5 3.0 2.8 2.6 19112 chr3R 7694574 3` UTR Nlg1 + chr3R 7704130 intergenic not near genes chr3R 7713686 intergenic not near genes chr3R_10_7700001 chr3R_7700001 RAL-837 1975 chr3R 7729448 7729472 chr3R 7737405 7737430 Stalker2 6 7958 7.5 2.5 5.0 1.0 7982 chr3R 7729448 intergenic not near genes chr3R 7733439 intergenic not near genes chr3R 7737430 intergenic not near genes chr3R_6_7730001 chr3R_7730001 RAL-837 1976 chr3R 7773344 7773344 chr3R 7890531 7890535 6 117190 23.0 10.0 16.5 0.3 117191 chr3R 7773344 intergenic not near genes chr3R 7831940 intron CG34384 + chr3R 7890535 intron mRpS9 - chr3R_6_7830001 chr3R_7830001 RAL-837 1977 chr3R 7973300 7973339 chr3R 7974382 7974421 1360 15 1080 6.5 3.0 4.8 2.6 1121 chr3R 7973300 intergenic not near genes chr3R 7973860 intergenic not near genes chr3R 7974421 3` UTR CD98hc - chr3R_15_7970001 chr3R_7970001 RAL-837 1978 chr3R 8041185 8041202 chr3R 8041303 8041310 4 116 14.5 13.0 13.8 0.3 125 chr3R 8041185 intergenic CG43060 + chr3R 8041248 exon CG43060 + chr3R 8041310 intron CG43060 + chr3R_4_8040001 chr3R_8040001 RAL-837 1979 chr3R 8049380 8049397 chr3R 8049588 8049605 5 208 2.5 15.0 8.8 0.5 225 chr3R 8049380 intron,exon CG43060 +,CG43618 + chr3R 8049492 intron CG43060 + chr3R 8049605 intron CG43060 + chr3R_5_8045001 chr3R_8045001 RAL-837 1980 chr3R 8075185 8075226 chr3R 8075323 8075353 11 135 5.5 7.5 6.5 1.5 168 chr3R 8075185 intron mAChR-B + chr3R 8075269 intron mAChR-B + chr3R 8075353 intron mAChR-B + chr3R_11_8075001 chr3R_8075001 RAL-837 1981 chr3R 8090545 8090566 chr3R 8094042 8094055 297 4 3494 2.5 7.0 4.8 0.7 3510 chr3R 8090545 intergenic CR44330 + chr3R 8092300 intergenic not near genes chr3R 8094055 intergenic CG7900 + chr3R_4_8090001 chr3R_8090001 RAL-837 1982 chr3R 8094394 8094436 chr3R 8099719 8099736 Transpac 8 5318 4.5 7.0 5.8 1.2 5342 chr3R 8094394 intron CG7900 + chr3R 8097065 intron CG7900 + chr3R 8099736 intron CG7900 + chr3R_8_8095001 chr3R_8095001 RAL-837 1983 chr3R 8107370 8107412 chr3R 8107524 8107566 10 154 3.0 5.0 4.0 2.0 196 chr3R 8107370 intron puc + chr3R 8107468 intron puc + chr3R 8107566 intron puc + chr3R_10_8105001 chr3R_8105001 RAL-837 1984 chr3R 8273721 8273735 chr3R 8273820 8273842 4 105 12.0 5.5 8.8 0.4 121 chr3R 8273721 intergenic not near genes chr3R 8273782 intergenic not near genes chr3R 8273842 intergenic not near genes chr3R_4_8270001 chr3R_8270001 RAL-837 1985 chr3R 8273737 8273768 chr3R 8273819 8273875 8 100 4.0 3.5 3.8 1.7 138 chr3R 8273737 intergenic not near genes chr3R 8273806 intergenic not near genes chr3R 8273875 intergenic not near genes chr3R_8_8270001 chr3R_8270001 RAL-837 1986 chr3R 8274721 8274759 chr3R 8274834 8274862 9 108 6.0 5.0 5.5 1.4 141 chr3R 8274721 intergenic not near genes chr3R 8274792 intergenic not near genes chr3R 8274862 intergenic not near genes chr3R_9_8270001 chr3R_8270001 RAL-837 1987 chr3R 8283057 8283084 chr3R 8283141 8283182 4 97 3.5 3.0 3.2 1.0 125 chr3R 8283057 intergenic not near genes chr3R 8283120 intergenic not near genes chr3R 8283182 intergenic not near genes chr3R_4_8280001 chr3R_8280001 RAL-837 1988 chr3R 8339246 8339247 chr3R 21907535 21907536 6 13568289 18.0 16.0 17.0 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-837 1989 chr3R 8403006 8403040 chr3R 8412192 8412226 roo 6 9185 5.0 3.5 4.2 1.2 9220 chr3R 8403006 intron CG45263 - chr3R 8407616 intron CG45263 - chr3R 8412226 intron CG45263 - chr3R_6_8405001 chr3R_8405001 RAL-837 1990 chr3R 8478063 8478106 chr3R 8478163 8478206 11 98 4.0 2.5 3.2 2.6 143 chr3R 8478063 intergenic CG45263 - chr3R 8478134 intergenic not near genes chr3R 8478206 intergenic not near genes chr3R_11_8475001 chr3R_8475001 RAL-837 1991 chr3R 8534763 8534813 chr3R 8535040 8535090 21 276 2.0 2.5 2.2 6.6 327 chr3R 8534763 intergenic not near genes chr3R 8534926 intergenic not near genes chr3R 8535090 intergenic not near genes chr3R_21_8530001 chr3R_8530001 RAL-837 1992 chr3R 8570455 8570510 chr3R 8575140 8575196 HMS-Beagle 9 4676 1.0 2.5 1.8 3.2 4741 chr3R 8570455 intergenic not near genes chr3R 8572826 intergenic not near genes chr3R 8575196 intergenic not near genes chr3R_9_8570001 chr3R_8570001 RAL-837 1993 chr3R 8601767 8601791 chr3R 8610934 8610964 roo 4 9169 5.0 6.0 5.5 0.6 9197 chr3R 8601767 intron 5-HT2B + chr3R 8606366 intron 5-HT2B + chr3R 8610964 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-837 1994 chr3R 8614804 8614819 chr3R 8614997 8615003 6 197 0.0 0.5 0.2 5.0 199 chr3R 8614804 intron 5-HT2B + chr3R 8614904 intron 5-HT2B + chr3R 8615003 intron 5-HT2B + chr3R_6_8610001 chr3R_8610001 RAL-837 1995 chr3R 8621524 8621555 chr3R 8621621 8621632 6 92 4.5 4.5 4.5 1.1 108 chr3R 8621524 intron 5-HT2B + chr3R 8621578 intron 5-HT2B + chr3R 8621632 intron 5-HT2B + chr3R_6_8620001 chr3R_8620001 RAL-837 1996 chr3R 8685292 8685305 chr3R 8685412 8685425 6 120 1.0 8.5 4.8 1.0 133 chr3R 8685292 intron CR44937 - chr3R 8685358 intron CR44937 - chr3R 8685425 intron CR44937 - chr3R_6_8685001 chr3R_8685001 RAL-837 1997 chr3R 8685308 8685315 chr3R 8685408 8685435 5 116 0.5 7.5 4.0 1.0 127 chr3R 8685308 intron CR44937 - chr3R 8685372 intron CR44937 - chr3R 8685435 intron CR44937 - chr3R_5_8685001 chr3R_8685001 RAL-837 1998 chr3R 8707336 8707380 chr3R 8709797 8709804 jockey 10 2452 4.5 6.5 5.5 1.5 2468 chr3R 8707336 intergenic not near genes chr3R 8708570 intergenic not near genes chr3R 8709804 intergenic not near genes chr3R_10_8705001 chr3R_8705001 RAL-837 1999 chr3R 8827500 8827523 chr3R 8827596 8827619 4 96 7.5 5.5 6.5 0.5 119 chr3R 8827500 3` UTR pyd - chr3R 8827560 3` UTR pyd - chr3R 8827619 3` UTR pyd - chr3R_4_8825001 chr3R_8825001 RAL-837 2000 chr3R 8894865 8894891 chr3R 8896031 8896057 1360 7 1173 5.0 5.5 5.2 1.1 1192 chr3R 8894865 intron pyd - chr3R 8895461 intron pyd - chr3R 8896057 intron pyd - chr3R_7_8895001 chr3R_8895001 RAL-837 2001 chr3R 8917873 8917906 chr3R 8917973 8918000 4 95 3.0 3.5 3.2 1.0 127 chr3R 8917873 intron pyd - chr3R 8917936 intron pyd - chr3R 8918000 intron pyd - chr3R_4_8915001 chr3R_8915001 RAL-837 2002 chr3R 9036702 9036745 chr3R 9036818 9036820 10 108 3.0 2.0 2.5 2.9 118 chr3R 9036702 intron neur - chr3R 9036761 intron neur - chr3R 9036820 intron neur - chr3R_10_9035001 chr3R_9035001 RAL-837 2003 chr3R 9043722 9043768 chr3R 9043828 9043876 7 104 5.5 7.0 6.2 1.0 154 chr3R 9043722 intron Nmdmc - chr3R 9043799 intron Nmdmc - chr3R 9043876 intron Nmdmc - chr3R_7_9040001 chr3R_9040001 RAL-837 2004 chr3R 9108856 9108884 chr3R 9108940 9108961 8 89 4.5 2.0 3.2 1.9 105 chr3R 9108856 intron pum - chr3R 9108908 intron pum - chr3R 9108961 intron pum - chr3R_8_9105001 chr3R_9105001 RAL-837 2005 chr3R 9278758 9278811 chr3R 9284035 9284074 Rt1a 9 5273 1.5 6.0 3.8 1.9 5316 chr3R 9278758 intergenic not near genes chr3R 9281416 intergenic not near genes chr3R 9284074 intergenic not near genes chr3R_9_9280001 chr3R_9280001 RAL-837 2006 chr3R 9295008 9295049 chr3R 9295106 9295147 7 92 2.5 3.5 3.0 1.8 139 chr3R 9295008 3` UTR CG8861 - chr3R 9295078 3` UTR CG8861 - chr3R 9295147 3` UTR CG8861 - chr3R_7_9295001 chr3R_9295001 RAL-837 2007 chr3R 9319562 9319587 chr3R 9320017 9320042 jockey 8 452 4.0 6.0 5.0 1.3 480 chr3R 9319562 intron CG8861 - chr3R 9319802 intron CG8861 - chr3R 9320042 intron CG8861 - chr3R_8_9315001 chr3R_9315001 RAL-837 2008 chr3R 9319589 9319606 chr3R 9320014 9320036 jockey 4 441 2.5 5.5 4.0 0.8 447 chr3R 9319589 intron CG8861 - chr3R 9319812 intron CG8861 - chr3R 9320036 intron CG8861 - chr3R_4_9315001 chr3R_9315001 RAL-837 2009 chr3R 9324345 9324392 chr3R 9324668 9324715 13 321 3.0 1.0 2.0 4.3 370 chr3R 9324345 intron CG8861 - chr3R 9324530 intron CG8861 - chr3R 9324715 intron CG8861 - chr3R_13_9320001 chr3R_9320001 RAL-837 2010 chr3R 9361814 9361838 chr3R 9362063 9362098 pogo 6 256 7.0 4.0 5.5 0.9 284 chr3R 9361814 3` UTR CG45050 + chr3R 9361956 3` UTR CG45050 + chr3R 9362098 3` UTR CG45050 + chr3R_6_9360001 chr3R_9360001 RAL-837 2011 chr3R 9361839 9361846 chr3R 9362060 9362089 pogo 5 241 5.5 3.5 4.5 0.9 250 chr3R 9361839 3` UTR CG45050 + chr3R 9361964 3` UTR CG45050 + chr3R 9362089 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-837 2012 chr3R 9382800 9382849 chr3R 9382940 9382969 9 135 2.0 2.0 2.0 3.0 169 chr3R 9382800 intron FER - chr3R 9382884 intron FER - chr3R 9382969 intron FER - chr3R_9_9380001 chr3R_9380001 RAL-837 2013 chr3R 9425393 9425428 chr3R 9425492 9425527 13 98 8.0 7.0 7.5 1.5 134 chr3R 9425393 intron ps + chr3R 9425460 intron ps + chr3R 9425527 intron ps + chr3R_13_9425001 chr3R_9425001 RAL-837 2014 chr3R 9601454 9601492 chr3R 9601592 9601618 9 135 5.0 6.0 5.5 1.4 164 chr3R 9601454 intron CG8312 + chr3R 9601536 intron CG8312 + chr3R 9601618 intron CG8312 + chr3R_9_9600001 chr3R_9600001 RAL-837 2015 chr3R 9647980 9648019 chr3R 9648424 9648448 12 442 4.5 4.5 4.5 2.2 468 chr3R 9647980 intron Dh44 + chr3R 9648214 intron Dh44 + chr3R 9648448 intron Dh44 + chr3R_12_9645001 chr3R_9645001 RAL-837 2016 chr3R 9663625 9663656 chr3R 9663746 9663793 12 130 2.5 2.0 2.2 3.8 168 chr3R 9663625 intron CG9492 - chr3R 9663709 intron CG9492 - chr3R 9663793 intron CG9492 - chr3R_12_9660001 chr3R_9660001 RAL-837 2017 chr3R 9702270 9702294 chr3R 9702341 9702349 9 84 3.0 4.5 3.8 1.9 79 chr3R 9702270 intron Unc-115a - chr3R 9702310 intron Unc-115a - chr3R 9702349 intron Unc-115a - chr3R_9_9700001 chr3R_9700001 RAL-837 2018 chr3R 9815445 9815483 chr3R 9815897 9815934 5 447 3.0 1.0 2.0 1.7 489 chr3R 9815445 intergenic eloF +,CG16904 - chr3R 9815690 intergenic CG16904 - chr3R 9815934 3` UTR CG16904 - chr3R_5_9815001 chr3R_9815001 RAL-837 2019 chr3R 9857804 9857832 chr3R 9858262 9858292 6 458 4.0 6.5 5.2 1.0 488 chr3R 9857804 intron Teh1 - chr3R 9858048 intron Teh1 - chr3R 9858292 intron Teh1 - chr3R_6_9855001 chr3R_9855001 RAL-837 2020 chr3R 9936856 9936904 chr3R 9936952 9936982 11 92 3.0 3.5 3.2 2.6 126 chr3R 9936856 intron Glut4EF + chr3R 9936919 intron Glut4EF + chr3R 9936982 intron Glut4EF + chr3R_11_9935001 chr3R_9935001 RAL-837 2021 chr3R 10073757 10073779 chr3R 10073886 10073891 6 125 5.5 3.0 4.2 1.2 134 chr3R 10073757 3` UTR nerfin-2 + chr3R 10073824 3` UTR CG5361 - chr3R 10073891 exon CG5361 - chr3R_6_10070001 chr3R_10070001 RAL-837 2022 chr3R 10073780 10073797 chr3R 10073879 10073926 7 118 2.0 2.5 2.2 2.2 146 chr3R 10073780 intergenic nerfin-2 +,CG5361 - chr3R 10073853 3` UTR CG5361 - chr3R 10073926 exon CG5361 - chr3R_7_10070001 chr3R_10070001 RAL-837 2023 chr3R 10140412 10140464 chr3R 10140522 10140575 8 104 0.5 1.0 0.8 4.4 163 chr3R 10140412 3` UTR TAF1B - chr3R 10140494 3` UTR TAF1B - chr3R 10140575 3` UTR TAF1B - chr3R_8_10140001 chr3R_10140001 RAL-837 2024 chr3R 10183090 10183111 chr3R 10183187 10183208 4 94 2.5 3.5 3.0 1.0 118 chr3R 10183090 intron CG12814 - chr3R 10183149 intron CG12814 - chr3R 10183208 intron CG12814 - chr3R_4_10180001 chr3R_10180001 RAL-837 2025 chr3R 10231788 10231812 chr3R 10237358 10237409 mdg3 9 5584 3.0 4.0 3.5 2.0 5621 chr3R 10231788 intron CG42795 + chr3R 10234598 intron CG42795 + chr3R 10237409 intron CG42795 + chr3R_9_10230001 chr3R_10230001 RAL-837 2026 chr3R 10255363 10255387 chr3R 10260823 10260842 I-element 5 5458 6.5 5.0 5.8 0.7 5479 chr3R 10255363 3` UTR Sirt6 - chr3R 10258102 intron Sirt6 - chr3R 10260842 exon Sirt6 - chr3R_5_10255001 chr3R_10255001 RAL-837 2027 chr3R 10275556 10275565 chr3R 10275653 10275662 4 97 8.5 5.0 6.8 0.5 106 chr3R 10275556 intron CG43143 + chr3R 10275609 intron CG43143 + chr3R 10275662 intron CG43143 + chr3R_4_10275001 chr3R_10275001 RAL-837 2028 chr3R 10275567 10275574 chr3R 10275635 10275671 7 89 7.0 4.0 5.5 1.1 104 chr3R 10275567 intron CG43143 + chr3R 10275619 intron CG43143 + chr3R 10275671 intron CG43143 + chr3R_7_10275001 chr3R_10275001 RAL-837 2029 chr3R 10334899 10334944 chr3R 10334999 10335039 13 100 4.0 2.5 3.2 3.1 140 chr3R 10334899 exon sle + chr3R 10334969 exon sle + chr3R 10335039 exon sle + chr3R_13_10330001 chr3R_10330001 RAL-837 2030 chr3R 10431125 10431170 chr3R 10431225 10431268 13 94 2.0 6.5 4.2 2.5 143 chr3R 10431125 intergenic not near genes chr3R 10431196 intergenic not near genes chr3R 10431268 intergenic not near genes chr3R_13_10430001 chr3R_10430001 RAL-837 2031 chr3R 10466457 10466472 chr3R 10466564 10466569 8 110 0.0 6.0 3.0 2.0 112 chr3R 10466457 intergenic not near genes chr3R 10466513 intergenic not near genes chr3R 10466569 intergenic not near genes chr3R_8_10465001 chr3R_10465001 RAL-837 2032 chr3R 10531845 10531897 chr3R 10531946 10531998 10 100 3.5 1.5 2.5 2.9 153 chr3R 10531845 intron hth - chr3R 10531922 intron hth - chr3R 10531998 intron hth - chr3R_10_10530001 chr3R_10530001 RAL-837 2033 chr3R 10535322 10535328 chr3R 10535427 10535441 4 111 1.0 5.5 3.2 1.0 119 chr3R 10535322 intron hth - chr3R 10535382 intron hth - chr3R 10535441 intron hth - chr3R_4_10535001 chr3R_10535001 RAL-837 2034 chr3R 10683561 10683587 chr3R 10683674 10683685 4 112 3.5 5.5 4.5 0.7 124 chr3R 10683561 intron CR44230 + chr3R 10683623 intron CR44230 + chr3R 10683685 intron CR44230 + chr3R_4_10680001 chr3R_10680001 RAL-837 2035 chr3R 10687317 10687331 chr3R 10687413 10687426 4 96 11.0 8.0 9.5 0.4 109 chr3R 10687317 intron Skeletor + chr3R 10687372 intron Skeletor + chr3R 10687426 intron Skeletor + chr3R_4_10685001 chr3R_10685001 RAL-837 2036 chr3R 10730459 10730503 chr3R 10730574 10730618 13 112 2.5 3.0 2.8 3.4 159 chr3R 10730459 intergenic not near genes chr3R 10730538 intergenic not near genes chr3R 10730618 intergenic not near genes chr3R_13_10730001 chr3R_10730001 RAL-837 2037 chr3R 10730974 10731023 chr3R 10731160 10731209 10 184 4.0 4.5 4.2 1.9 235 chr3R 10730974 intergenic not near genes chr3R 10731092 intergenic not near genes chr3R 10731209 intergenic not near genes chr3R_10_10730001 chr3R_10730001 RAL-837 2038 chr3R 10737548 10737599 chr3R 10737934 10737980 15 383 3.5 4.0 3.8 3.1 432 chr3R 10737548 intergenic TkR86C - chr3R 10737764 3` UTR TkR86C - chr3R 10737980 3` UTR TkR86C - chr3R_15_10735001 chr3R_10735001 RAL-837 2039 chr3R 10759471 10759513 chr3R 10759570 10759612 11 97 3.0 5.5 4.2 2.1 141 chr3R 10759471 intergenic CG31272 - chr3R 10759542 intergenic CG31272 - chr3R 10759612 intergenic CG31272 -,MED7 - chr3R_11_10755001 chr3R_10755001 RAL-837 2040 chr3R 10785800 10785840 chr3R 10785889 10785939 12 93 3.5 2.0 2.8 3.2 139 chr3R 10785800 intron Rbp1 + chr3R 10785870 intron Rbp1 + chr3R 10785939 intron Rbp1 + chr3R_12_10785001 chr3R_10785001 RAL-837 2041 chr3R 10804155 10804207 chr3R 10811707 10811749 17.6 5 7550 2.5 2.5 2.5 1.4 7594 chr3R 10804155 intergenic CG14692 - chr3R 10807952 intergenic not near genes chr3R 10811749 3` UTR CG14693 - chr3R_5_10805001 chr3R_10805001 RAL-837 2042 chr3R 10870850 10870899 chr3R 10870951 10871000 14 98 1.5 5.0 3.2 3.3 150 chr3R 10870850 intergenic Fdh -,Tsp86D + chr3R 10870925 3` UTR Fdh - chr3R 10871000 exon Fdh - chr3R_14_10870001 chr3R_10870001 RAL-837 2043 chr3R 10919675 10919688 chr3R 10919773 10919786 5 98 8.0 2.0 5.0 0.8 111 chr3R 10919675 intergenic not near genes chr3R 10919730 intergenic not near genes chr3R 10919786 intergenic not near genes chr3R_5_10915001 chr3R_10915001 RAL-837 2044 chr3R 10919693 10919717 chr3R 10919761 10919815 14 89 5.5 1.5 3.5 3.1 122 chr3R 10919693 intergenic not near genes chr3R 10919754 intergenic not near genes chr3R 10919815 intergenic not near genes chr3R_14_10915001 chr3R_10915001 RAL-837 2045 chr3R 10920040 10920077 chr3R 10920128 10920175 11 91 5.0 4.5 4.8 1.9 135 chr3R 10920040 intergenic not near genes chr3R 10920108 intergenic not near genes chr3R 10920175 intergenic not near genes chr3R_11_10920001 chr3R_10920001 RAL-837 2046 chr3R 10927363 10927369 chr3R 10927626 10927632 7 263 0.5 4.5 2.5 2.0 269 chr3R 10927363 intergenic not near genes chr3R 10927498 intergenic not near genes chr3R 10927632 intergenic not near genes chr3R_7_10925001 chr3R_10925001 RAL-837 2047 chr3R 11001085 11001126 chr3R 11001298 11001339 7 212 4.5 7.0 5.8 1.0 254 chr3R 11001085 intron CG34114 + chr3R 11001212 intron CG34114 + chr3R 11001339 intron CG34114 + chr3R_7_11000001 chr3R_11000001 RAL-837 2048 chr3R 11016943 11016983 chr3R 11017046 11017052 11 103 3.0 6.0 4.5 2.0 109 chr3R 11016943 intron CG34114 + chr3R 11016998 intron CG34114 + chr3R 11017052 intron CG34114 + chr3R_11_11015001 chr3R_11015001 RAL-837 2049 chr3R 11048569 11048600 chr3R 11048673 11048703 7 99 3.5 9.0 6.2 1.0 134 chr3R 11048569 3` UTR CG34114 + chr3R 11048636 3` UTR CG34114 + chr3R 11048703 3` UTR CG34114 + chr3R_7_11045001 chr3R_11045001 RAL-837 2050 chr3R 11056877 11056896 chr3R 11056975 11056976 4 94 6.0 0.0 3.0 1.0 99 chr3R 11056877 intergenic not near genes chr3R 11056926 intergenic not near genes chr3R 11056976 intergenic not near genes chr3R_4_11055001 chr3R_11055001 RAL-837 2051 chr3R 11102307 11102353 chr3R 11102408 11102424 9 95 2.5 2.0 2.2 2.8 117 chr3R 11102307 intergenic not near genes chr3R 11102366 intergenic not near genes chr3R 11102424 intergenic not near genes chr3R_9_11100001 chr3R_11100001 RAL-837 2052 chr3R 11126062 11126097 chr3R 11126169 11126205 8 103 5.5 2.5 4.0 1.6 143 chr3R 11126062 intergenic not near genes chr3R 11126134 intergenic Ugt86Dd - chr3R 11126205 intergenic Ugt86Dd - chr3R_8_11125001 chr3R_11125001 RAL-837 2053 chr3R 11197967 11198014 chr3R 11198086 11198133 10 116 2.5 5.0 3.8 2.1 166 chr3R 11197967 intron cu + chr3R 11198050 intron cu + chr3R 11198133 intron cu + chr3R_10_11195001 chr3R_11195001 RAL-837 2054 chr3R 11242231 11242284 chr3R 11242340 11242385 14 104 5.0 5.5 5.2 2.3 154 chr3R 11242231 3` UTR CG17734 - chr3R 11242308 3` UTR CG17734 - chr3R 11242385 3` UTR CG17734 - chr3R_14_11240001 chr3R_11240001 RAL-837 2055 chr3R 11269432 11269476 chr3R 11269572 11269621 10 140 2.5 1.0 1.8 3.6 189 chr3R 11269432 3` UTR CR31386 - chr3R 11269526 3` UTR CR31386 - chr3R 11269621 3` UTR CR31386 - chr3R_10_11265001 chr3R_11265001 RAL-837 2056 chr3R 11342540 11342549 chr3R 11342636 11342645 6 96 4.5 4.0 4.2 1.2 105 chr3R 11342540 intron pros + chr3R 11342592 intron pros + chr3R 11342645 intron pros + chr3R_6_11340001 chr3R_11340001 RAL-837 2057 chr3R 11342553 11342560 chr3R 11342633 11342656 4 92 2.5 3.5 3.0 1.0 103 chr3R 11342553 intron pros + chr3R 11342604 intron pros + chr3R 11342656 intron pros + chr3R_4_11340001 chr3R_11340001 RAL-837 2058 chr3R 11342562 11342571 chr3R 11342632 11342667 6 85 0.5 3.5 2.0 2.0 105 chr3R 11342562 intron pros + chr3R 11342614 intron pros + chr3R 11342667 intron pros + chr3R_6_11340001 chr3R_11340001 RAL-837 2059 chr3R 11379218 11379261 chr3R 11388393 11388400 roo 11 9170 5.0 5.0 5.0 1.8 9182 chr3R 11379218 intron pros + chr3R 11383809 intron pros + chr3R 11388400 intron pros + chr3R_11_11380001 chr3R_11380001 RAL-837 2060 chr3R 11518812 11518832 chr3R 11518923 11518928 4 107 3.5 4.5 4.0 0.8 116 chr3R 11518812 intergenic not near genes chr3R 11518870 intergenic not near genes chr3R 11518928 intergenic not near genes chr3R_4_11515001 chr3R_11515001 RAL-837 2061 chr3R 11570046 11570094 chr3R 11575629 11575677 12 5585 12.0 30.5 21.2 0.5 5631 chr3R 11570046 intron Mrp4 + chr3R 11572862 exon Mrp4 + chr3R 11575677 3` UTR Mrp4 + chr3R_12_11570001 chr3R_11570001 RAL-837 2062 chr3R 11634293 11634316 chr3R 11634364 11634396 7 89 5.5 6.5 6.0 1.0 103 chr3R 11634293 3` UTR Csk - chr3R 11634344 3` UTR Csk - chr3R 11634396 3` UTR Csk - chr3R_7_11630001 chr3R_11630001 RAL-837 2063 chr3R 11694707 11694747 chr3R 11694820 11694846 16 110 3.0 6.5 4.8 2.8 139 chr3R 11694707 intergenic Fer3 - chr3R 11694776 intergenic Fer3 - chr3R 11694846 intergenic not near genes chr3R_16_11690001 chr3R_11690001 RAL-837 2064 chr3R 11695731 11695767 chr3R 11695821 11695868 11 94 5.0 6.0 5.5 1.7 137 chr3R 11695731 intergenic not near genes chr3R 11695800 intergenic not near genes chr3R 11695868 intergenic not near genes chr3R_11_11695001 chr3R_11695001 RAL-837 2065 chr3R 11710190 11710238 chr3R 11710288 11710311 9 95 2.0 4.5 3.2 2.1 121 chr3R 11710190 intergenic not near genes chr3R 11710250 intergenic not near genes chr3R 11710311 intergenic not near genes chr3R_9_11710001 chr3R_11710001 RAL-837 2066 chr3R 11734145 11734180 chr3R 11734284 11734303 5 134 5.0 5.5 5.2 0.8 158 chr3R 11734145 intergenic not near genes chr3R 11734224 intergenic not near genes chr3R 11734303 intergenic not near genes chr3R_5_11730001 chr3R_11730001 RAL-837 2067 chr3R 11734181 11734188 chr3R 11734282 11734289 5 114 4.0 5.0 4.5 0.9 108 chr3R 11734181 intergenic not near genes chr3R 11734235 intergenic not near genes chr3R 11734289 intergenic not near genes chr3R_5_11730001 chr3R_11730001 RAL-837 2068 chr3R 11830331 11830358 chr3R 11830435 11830462 7 103 3.0 2.5 2.8 1.8 131 chr3R 11830331 intron CG6959 - chr3R 11830396 intron CG6959 - chr3R 11830462 intron CG6959 - chr3R_7_11830001 chr3R_11830001 RAL-837 2069 chr3R 11841044 11841083 chr3R 11846255 11846262 BS 9 5199 3.0 5.5 4.2 1.7 5218 chr3R 11841044 intron CG6959 - chr3R 11843653 intron CG6959 - chr3R 11846262 intron CG6959 - chr3R_9_11840001 chr3R_11840001 RAL-837 2070 chr3R 11853457 11853472 chr3R 11853589 11853639 9 158 0.5 4.0 2.2 2.8 182 chr3R 11853457 intron CG6959 - chr3R 11853548 intron CG6959 - chr3R 11853639 intron CG6959 - chr3R_9_11850001 chr3R_11850001 RAL-837 2071 chr3R 11853770 11853800 chr3R 11853877 11853925 16 119 3.0 5.5 4.2 3.1 155 chr3R 11853770 intron CG6959 - chr3R 11853848 intron CG6959 - chr3R 11853925 intron CG6959 - chr3R_16_11850001 chr3R_11850001 RAL-837 2072 chr3R 11909376 11909388 chr3R 11909446 11909447 6 87 5.0 6.5 5.8 0.9 71 chr3R 11909376 intron Cad87A - chr3R 11909412 intron Cad87A - chr3R 11909447 intron Cad87A - chr3R_6_11905001 chr3R_11905001 RAL-837 2073 chr3R 11957836 11957873 chr3R 11958138 11958161 S-element 6 295 5.0 0.0 2.5 1.7 325 chr3R 11957836 intergenic not near genes chr3R 11957998 intergenic not near genes chr3R 11958161 intergenic not near genes chr3R_6_11955001 chr3R_11955001 RAL-837 2074 chr3R 12022866 12022916 chr3R 12025063 12025096 pogo 7 2188 1.0 2.5 1.8 2.5 2230 chr3R 12022866 intergenic not near genes chr3R 12023981 intergenic not near genes chr3R 12025096 intergenic not near genes chr3R_7_12020001 chr3R_12020001 RAL-837 2075 chr3R 12045159 12045192 chr3R 12045250 12045288 5 95 5.0 6.0 5.5 0.8 129 chr3R 12045159 intergenic not near genes chr3R 12045224 intergenic not near genes chr3R 12045288 intergenic not near genes chr3R_5_12045001 chr3R_12045001 RAL-837 2076 chr3R 12082005 12082030 chr3R 12082071 12082126 12 88 2.5 4.0 3.2 2.9 121 chr3R 12082005 intron CG14741 - chr3R 12082066 intron CG14741 - chr3R 12082126 intron CG14741 - chr3R_12_12080001 chr3R_12080001 RAL-837 2077 chr3R 12154029 12154074 chr3R 12154440 12154480 5 408 23.5 15.0 19.2 0.2 451 chr3R 12154029 intron dpr15 - chr3R 12154254 intron dpr15 - chr3R 12154480 intron dpr15 - chr3R_5_12150001 chr3R_12150001 RAL-837 2078 chr3R 12183162 12183204 chr3R 12183268 12183272 9 97 3.0 4.0 3.5 2.0 110 chr3R 12183162 intergenic not near genes chr3R 12183217 intergenic not near genes chr3R 12183272 intergenic not near genes chr3R_9_12180001 chr3R_12180001 RAL-837 2079 chr3R 12267838 12267855 chr3R 12267938 12267940 4 96 12.0 5.5 8.8 0.4 102 chr3R 12267838 intron svp + chr3R 12267889 intron svp + chr3R 12267940 intron svp + chr3R_4_12265001 chr3R_12265001 RAL-837 2080 chr3R 12267857 12267889 chr3R 12267935 12267976 11 94 5.0 5.0 5.0 1.8 119 chr3R 12267857 intron svp + chr3R 12267916 intron svp + chr3R 12267976 intron svp + chr3R_11_12265001 chr3R_12265001 RAL-837 2081 chr3R 12344115 12344150 chr3R 12344212 12344247 7 94 5.5 6.5 6.0 1.0 132 chr3R 12344115 intergenic not near genes chr3R 12344181 intergenic not near genes chr3R 12344247 intergenic not near genes chr3R_7_12340001 chr3R_12340001 RAL-837 2082 chr3R 12392875 12392898 chr3R 12392995 12393016 4 120 6.0 10.0 8.0 0.4 141 chr3R 12392875 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392946 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393016 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_4_12390001 chr3R_12390001 RAL-837 2083 chr3R 12404976 12405013 chr3R 12405218 12405255 7 238 5.5 4.5 5.0 1.2 279 chr3R 12404976 intron Cyp9f2 - chr3R 12405116 intron Cyp9f2 - chr3R 12405255 intron Cyp9f2 - chr3R_7_12405001 chr3R_12405001 RAL-837 2084 chr3R 11912114 11912154 chr3R 12511292 12511326 13 599173 45.5 9.5 27.5 0.5 599212 chr3R 11912114 intron Cad87A - chr3R 12211720 intergenic not near genes chr3R 12511326 3` UTR Hsp70Bc + chr3R_13_12210001 chr3R_12210001 RAL-837 2085 chr3R 12582715 12582751 chr3R 12582815 12582830 7 96 0.5 3.0 1.8 2.5 115 chr3R 12582715 intron Octbeta2R - chr3R 12582772 intron Octbeta2R - chr3R 12582830 intron Octbeta2R - chr3R_7_12580001 chr3R_12580001 RAL-837 2086 chr3R 12666756 12666795 chr3R 12666903 12666942 14 146 4.0 4.0 4.0 2.8 186 chr3R 12666756 intron CG14395 + chr3R 12666849 intron CG14395 + chr3R 12666942 intron CG14395 + chr3R_14_12665001 chr3R_12665001 RAL-837 2087 chr3R 12720682 12720733 chr3R 12720782 12720833 13 89 4.5 1.5 3.0 3.2 151 chr3R 12720682 intron Men - chr3R 12720758 intron Men - chr3R 12720833 intron Men - chr3R_13_12720001 chr3R_12720001 RAL-837 2088 chr3R 12733454 12733506 chr3R 12733551 12733597 8 88 3.0 2.5 2.8 2.1 143 chr3R 12733454 intergenic not near genes chr3R 12733526 intergenic not near genes chr3R 12733597 intergenic not near genes chr3R_8_12730001 chr3R_12730001 RAL-837 2089 chr3R 12787937 12787951 chr3R 12788038 12788047 6 101 2.5 3.5 3.0 1.5 110 chr3R 12787937 intergenic not near genes chr3R 12787992 intergenic not near genes chr3R 12788047 intergenic not near genes chr3R_6_12785001 chr3R_12785001 RAL-837 2090 chr3R 12864563 12864583 chr3R 12865068 12865088 roo 5 505 0.5 3.0 1.8 1.8 525 chr3R 12864563 intergenic not near genes chr3R 12864826 intergenic not near genes chr3R 12865088 intergenic not near genes chr3R_5_12860001 chr3R_12860001 RAL-837 2091 chr3R 12866489 12866516 chr3R 12866651 12866687 9 170 2.0 5.0 3.5 2.0 198 chr3R 12866489 intergenic not near genes chr3R 12866588 intergenic not near genes chr3R 12866687 intergenic not near genes chr3R_9_12865001 chr3R_12865001 RAL-837 2092 chr3R 12920174 12920177 chr3R 12925356 12925363 copia 4 5191 2.0 5.0 3.5 0.9 5189 chr3R 12920174 intron beat-Vb + chr3R 12922768 intron beat-Vb + chr3R 12925363 intron beat-Vb + chr3R_4_12920001 chr3R_12920001 RAL-837 2093 chr3R 12920178 12920186 chr3R 12925355 12925409 copia 10 5200 2.0 4.5 3.2 2.4 5231 chr3R 12920178 intron beat-Vb + chr3R 12922794 intron beat-Vb + chr3R 12925409 intron beat-Vb + chr3R_10_12920001 chr3R_12920001 RAL-837 2094 chr3R 13026996 13027008 chr3R 13027097 13027109 4 101 13.5 5.5 9.5 0.4 113 chr3R 13026996 3` UTR CG12360 - chr3R 13027052 3` UTR CG12360 - chr3R 13027109 3` UTR CG12360 - chr3R_4_13025001 chr3R_13025001 RAL-837 2095 chr3R 13027023 13027038 chr3R 13027088 13027088 7 75 9.0 6.0 7.5 0.8 65 chr3R 13027023 3` UTR CG12360 - chr3R 13027056 3` UTR CG12360 - chr3R 13027088 3` UTR CG12360 - chr3R_7_13025001 chr3R_13025001 RAL-837 2096 chr3R 13059952 13059972 chr3R 13060157 13060187 7 213 4.0 6.0 5.0 1.2 235 chr3R 13059952 intron sim + chr3R 13060070 intron sim + chr3R 13060187 intron sim + chr3R_7_13060001 chr3R_13060001 RAL-837 2097 chr3R 13066990 13067006 chr3R 13067097 13067101 4 102 5.0 3.0 4.0 0.8 111 chr3R 13066990 intron sim + chr3R 13067046 intron sim + chr3R 13067101 intron sim + chr3R_4_13065001 chr3R_13065001 RAL-837 2098 chr3R 13067848 13067867 chr3R 13067923 13067966 5 84 2.5 4.5 3.5 1.1 118 chr3R 13067848 intron sim + chr3R 13067907 intron sim + chr3R 13067966 intron sim + chr3R_5_13065001 chr3R_13065001 RAL-837 2099 chr3R 13135816 13135852 chr3R 13138001 13138037 pogo 4 2181 1.0 2.5 1.8 1.4 2221 chr3R 13135816 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136926 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138037 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13135001 chr3R_13135001 RAL-837 2100 chr3R 13143029 13143065 chr3R 13148608 13148635 mdg3 7 5582 4.0 1.5 2.8 1.8 5606 chr3R 13143029 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145832 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148635 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_7_13145001 chr3R_13145001 RAL-837 2101 chr3R 13151347 13151389 chr3R 13151493 13151533 5 139 0.0 2.5 1.2 2.3 186 chr3R 13151347 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13151440 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13151533 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13150001 chr3R_13150001 RAL-837 2102 chr3R 13210754 13210789 chr3R 13210851 13210886 10 96 4.5 2.0 3.2 2.4 132 chr3R 13210754 intron CG8483 - chr3R 13210820 intron CG8483 - chr3R 13210886 intron CG8483 - chr3R_10_13210001 chr3R_13210001 RAL-837 2103 chr3R 13248631 13248680 chr3R 13248750 13248784 12 114 3.0 1.5 2.2 3.8 153 chr3R 13248631 intron Ace - chr3R 13248708 intron Ace - chr3R 13248784 intron Ace - chr3R_12_13245001 chr3R_13245001 RAL-837 2104 chr3R 13303912 13303942 chr3R 13303995 13304045 13 96 6.0 3.0 4.5 2.4 133 chr3R 13303912 intron CG32473 + chr3R 13303978 intron CG32473 + chr3R 13304045 intron CG32473 + chr3R_13_13300001 chr3R_13300001 RAL-837 2105 chr3R 13311586 13311644 chr3R 13318888 13318899 Doc 5 7275 10.0 4.0 7.0 0.6 7313 chr3R 13311586 exon CG32473 + chr3R 13315242 intergenic not near genes chr3R 13318899 intergenic CG45080 - chr3R_5_13315001 chr3R_13315001 RAL-837 2106 chr3R 13322351 13322385 chr3R 13322455 13322489 11 104 5.5 2.0 3.8 2.3 138 chr3R 13322351 intergenic not near genes chr3R 13322420 intergenic not near genes chr3R 13322489 intergenic not near genes chr3R_11_13320001 chr3R_13320001 RAL-837 2107 chr3R 13376260 13376293 chr3R 13376369 13376388 9 107 3.5 7.0 5.2 1.5 128 chr3R 13376260 intron CG9813 - chr3R 13376324 intron CG9813 - chr3R 13376388 intron CG9813 - chr3R_9_13375001 chr3R_13375001 RAL-837 2108 chr3R 13470848 13470875 chr3R 13471197 13471213 6 342 1.0 2.5 1.8 2.1 365 chr3R 13470848 intergenic not near genes chr3R 13471030 intergenic not near genes chr3R 13471213 intergenic not near genes chr3R_6_13470001 chr3R_13470001 RAL-837 2109 chr3R 13558024 13558050 chr3R 13558131 13558156 7 106 6.5 6.5 6.5 0.9 132 chr3R 13558024 intergenic not near genes chr3R 13558090 intergenic not near genes chr3R 13558156 intergenic not near genes chr3R_7_13555001 chr3R_13555001 RAL-837 2110 chr3R 13558951 13558974 chr3R 13559181 13559204 5 228 7.5 2.5 5.0 0.8 253 chr3R 13558951 intergenic not near genes chr3R 13559078 intergenic not near genes chr3R 13559204 intergenic not near genes chr3R_5_13555001 chr3R_13555001 RAL-837 2111 chr3R 13599199 13599234 chr3R 13599330 13599365 4 131 1.5 5.0 3.2 1.0 166 chr3R 13599199 intergenic not near genes chr3R 13599282 intergenic not near genes chr3R 13599365 intergenic not near genes chr3R_4_13595001 chr3R_13595001 RAL-837 2112 chr3R 13603062 13603077 chr3R 13603151 13603188 6 100 2.0 2.0 2.0 2.0 126 chr3R 13603062 intergenic not near genes chr3R 13603125 intergenic not near genes chr3R 13603188 intergenic not near genes chr3R_6_13600001 chr3R_13600001 RAL-837 2113 chr3R 13625672 13625715 chr3R 13625773 13625816 10 100 5.5 3.5 4.5 1.8 144 chr3R 13625672 intergenic not near genes chr3R 13625744 intergenic not near genes chr3R 13625816 intergenic not near genes chr3R_10_13625001 chr3R_13625001 RAL-837 2114 chr3R 13693026 13693028 chr3R 21907535 21907536 4 8214508 6.0 16.0 11.0 0.3 8214510 chr3R 13693026 3` UTR flfl + chr3R 17800281 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_4_17800001 chr3R_17800001 RAL-837 2115 chr3R 13714502 13714551 chr3R 13714661 13714698 13 154 0.0 3.0 1.5 5.2 196 chr3R 13714502 intergenic CR34044 - chr3R 13714600 intergenic CR34044 - chr3R 13714698 intergenic CR34044 - chr3R_13_13710001 chr3R_13710001 RAL-837 2116 chr3R 13736603 13736614 chr3R 13736670 13736688 5 73 2.0 6.0 4.0 1.0 85 chr3R 13736603 intron CG34383 + chr3R 13736646 intron CG34383 + chr3R 13736688 intron CG34383 + chr3R_5_13735001 chr3R_13735001 RAL-837 2117 chr3R 13758133 13758172 chr3R 13758239 13758261 4 102 0.0 4.0 2.0 1.3 128 chr3R 13758133 intron CG34383 + chr3R 13758197 intron CG34383 + chr3R 13758261 intron CG34383 + chr3R_4_13755001 chr3R_13755001 RAL-837 2118 chr3R 13828822 13828859 chr3R 13828928 13828959 7 105 6.0 2.0 4.0 1.4 137 chr3R 13828822 intergenic CR43300 + chr3R 13828890 intergenic CR43300 + chr3R 13828959 intergenic not near genes chr3R_7_13825001 chr3R_13825001 RAL-837 2119 chr3R 13830733 13830779 chr3R 13830917 13830953 8 178 3.0 1.0 2.0 2.7 220 chr3R 13830733 intergenic not near genes chr3R 13830843 intergenic not near genes chr3R 13830953 intergenic not near genes chr3R_8_13830001 chr3R_13830001 RAL-837 2120 chr3R 13863661 13863716 chr3R 13863769 13863796 11 86 3.0 1.0 2.0 3.7 135 chr3R 13863661 intergenic not near genes chr3R 13863728 intergenic not near genes chr3R 13863796 intergenic not near genes chr3R_11_13860001 chr3R_13860001 RAL-837 2121 chr3R 13864137 13864157 chr3R 13864244 13864249 5 104 0.0 6.0 3.0 1.2 112 chr3R 13864137 intergenic not near genes chr3R 13864193 intergenic not near genes chr3R 13864249 intergenic not near genes chr3R_5_13860001 chr3R_13860001 RAL-837 2122 chr3R 13864161 13864170 chr3R 13864229 13864277 4 89 0.0 2.0 1.0 2.0 116 chr3R 13864161 intergenic not near genes chr3R 13864219 intergenic not near genes chr3R 13864277 intergenic not near genes chr3R_4_13860001 chr3R_13860001 RAL-837 2123 chr3R 13880529 13880579 chr3R 13880670 13880677 9 133 1.0 4.5 2.8 2.4 148 chr3R 13880529 intergenic not near genes chr3R 13880603 intergenic not near genes chr3R 13880677 intergenic not near genes chr3R_9_13880001 chr3R_13880001 RAL-837 2124 chr3R 13896804 13896824 chr3R 13896942 13896996 6 163 6.5 2.5 4.5 1.1 192 chr3R 13896804 intergenic not near genes chr3R 13896900 intergenic not near genes chr3R 13896996 intergenic not near genes chr3R_6_13895001 chr3R_13895001 RAL-837 2125 chr3R 14021619 14021644 chr3R 14023464 14023476 S-element 5 1842 4.5 1.5 3.0 1.2 1857 chr3R 14021619 intron rdx - chr3R 14022548 intron rdx - chr3R 14023476 intron rdx - chr3R_5_14020001 chr3R_14020001 RAL-837 2126 chr3R 14029810 14029864 chr3R 14029918 14029956 10 105 3.0 0.0 1.5 4.0 146 chr3R 14029810 intron,exon rdx -,Cyp6d5 + chr3R 14029883 intron,intron rdx -,Cyp6d5 + chr3R 14029956 intron,intron rdx -,Cyp6d5 + chr3R_10_14025001 chr3R_14025001 RAL-837 2127 chr3R 14048994 14049047 chr3R 14049094 14049130 19 92 1.5 0.5 1.0 9.5 136 chr3R 14048994 intergenic not near genes chr3R 14049062 intergenic not near genes chr3R 14049130 intergenic not near genes chr3R_19_14045001 chr3R_14045001 RAL-837 2128 chr3R 14067132 14067152 chr3R 14067222 14067251 12 98 5.0 2.0 3.5 2.7 119 chr3R 14067132 exon foxo + chr3R 14067192 intron foxo + chr3R 14067251 intron foxo + chr3R_12_14065001 chr3R_14065001 RAL-837 2129 chr3R 14083398 14083404 chr3R 14083509 14083525 4 118 3.5 0.0 1.8 1.4 127 chr3R 14083398 intron foxo + chr3R 14083462 intron foxo + chr3R 14083525 intron foxo + chr3R_4_14080001 chr3R_14080001 RAL-837 2130 chr3R 14083409 14083434 chr3R 14083507 14083515 7 109 1.0 0.0 0.5 4.7 106 chr3R 14083409 intron foxo + chr3R 14083462 intron foxo + chr3R 14083515 intron foxo + chr3R_7_14080001 chr3R_14080001 RAL-837 2131 chr3R 14170151 14170159 chr3R 14170254 14170268 5 108 2.5 4.0 3.2 1.2 117 chr3R 14170151 3` UTR Dop1R1 - chr3R 14170210 3` UTR Dop1R1 - chr3R 14170268 3` UTR Dop1R1 - chr3R_5_14170001 chr3R_14170001 RAL-837 2132 chr3R 14170162 14170169 chr3R 14170252 14170279 5 104 2.5 4.0 3.2 1.2 117 chr3R 14170162 3` UTR Dop1R1 - chr3R 14170220 3` UTR Dop1R1 - chr3R 14170279 3` UTR Dop1R1 - chr3R_5_14170001 chr3R_14170001 RAL-837 2133 chr3R 14180792 14180818 chr3R 14185577 14185603 F-element 7 4784 8.0 0.0 4.0 1.4 4811 chr3R 14180792 intron Dop1R1 - chr3R 14183198 intron Dop1R1 - chr3R 14185603 intron Dop1R1 - chr3R_7_14180001 chr3R_14180001 RAL-837 2134 chr3R 14211318 14211364 chr3R 14211411 14211462 15 91 4.5 4.5 4.5 2.7 144 chr3R 14211318 intron Dop1R1 - chr3R 14211390 intron Dop1R1 - chr3R 14211462 intron Dop1R1 - chr3R_15_14210001 chr3R_14210001 RAL-837 2135 chr3R 14246382 14246401 chr3R 14247898 14247917 jockey 5 1516 5.5 5.5 5.5 0.8 1535 chr3R 14246382 intergenic not near genes chr3R 14247150 intergenic not near genes chr3R 14247917 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-837 2136 chr3R 14246407 14246418 chr3R 14247888 14247908 jockey 7 1499 4.0 5.5 4.8 1.2 1501 chr3R 14246407 intergenic not near genes chr3R 14247158 intergenic not near genes chr3R 14247908 intergenic not near genes chr3R_7_14245001 chr3R_14245001 RAL-837 2137 chr3R 14248712 14248736 chr3R 14248810 14248834 4 98 2.0 3.0 2.5 1.1 122 chr3R 14248712 intergenic not near genes chr3R 14248773 intergenic not near genes chr3R 14248834 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-837 2138 chr3R 14278432 14278450 chr3R 14278507 14278508 7 91 2.5 4.0 3.2 1.7 76 chr3R 14278432 intron trx - chr3R 14278470 intron trx - chr3R 14278508 intron trx - chr3R_7_14275001 chr3R_14275001 RAL-837 2139 chr3R 14295138 14295186 chr3R 14295270 14295318 14 126 3.5 4.0 3.8 2.9 180 chr3R 14295138 intron CG12207 + chr3R 14295228 intron CG12207 + chr3R 14295318 intron CG12207 + chr3R_14_14295001 chr3R_14295001 RAL-837 2140 chr3R 14374560 14374566 chr3R 14374691 14374697 4 131 10.5 4.0 7.2 0.5 137 chr3R 14374560 intergenic not near genes chr3R 14374628 intergenic not near genes chr3R 14374697 intergenic not near genes chr3R_4_14370001 chr3R_14370001 RAL-837 2141 chr3R 14374567 14374570 chr3R 14374685 14374701 4 128 10.0 3.0 6.5 0.5 134 chr3R 14374567 intergenic not near genes chr3R 14374634 intergenic not near genes chr3R 14374701 intergenic not near genes chr3R_4_14370001 chr3R_14370001 RAL-837 2142 chr3R 14440714 14440722 chr3R 14440810 14440818 6 95 3.5 8.0 5.8 0.9 104 chr3R 14440714 intron cv-c - chr3R 14440766 intron cv-c - chr3R 14440818 intron cv-c - chr3R_6_14440001 chr3R_14440001 RAL-837 2143 chr3R 14543592 14543628 chr3R 14543679 14543728 10 93 3.0 2.5 2.8 2.6 136 chr3R 14543592 intron Pde6 - chr3R 14543660 intron Pde6 - chr3R 14543728 intron Pde6 - chr3R_10_14540001 chr3R_14540001 RAL-837 2144 chr3R 14565708 14565730 chr3R 14565801 14565818 8 98 3.0 4.0 3.5 1.8 110 chr3R 14565708 intergenic CG14852 + chr3R 14565763 intergenic CG14852 + chr3R 14565818 intergenic CG14852 + chr3R_8_14565001 chr3R_14565001 RAL-837 2145 chr3R 14608455 14608471 chr3R 14608567 14608583 4 112 0.0 6.5 3.2 1.0 128 chr3R 14608455 intergenic stumps + chr3R 14608519 intergenic stumps + chr3R 14608583 intergenic not near genes chr3R_4_14605001 chr3R_14605001 RAL-837 2146 chr3R 14623874 14623892 chr3R 14624066 14624101 5 200 2.5 3.5 3.0 1.2 227 chr3R 14623874 intron put - chr3R 14623988 intron put - chr3R 14624101 intron put - chr3R_5_14620001 chr3R_14620001 RAL-837 2147 chr3R 14749367 14749411 chr3R 14749457 14749492 5 88 0.0 3.5 1.8 1.8 125 chr3R 14749367 intron,intron jvl +,smp-30 - chr3R 14749430 intron,intron jvl +,smp-30 - chr3R 14749492 intron,intron jvl +,smp-30 - chr3R_5_14745001 chr3R_14745001 RAL-837 2148 chr3R 14842544 14842592 chr3R 14842648 14842696 8 99 5.0 5.0 5.0 1.3 152 chr3R 14842544 intron btsz - chr3R 14842620 intron btsz - chr3R 14842696 intron btsz - chr3R_8_14840001 chr3R_14840001 RAL-837 2149 chr3R 14953973 14954016 chr3R 14954098 14954137 15 123 5.5 4.5 5.0 2.5 164 chr3R 14953973 intergenic not near genes chr3R 14954055 intergenic not near genes chr3R 14954137 intergenic not near genes chr3R_15_14950001 chr3R_14950001 RAL-837 2150 chr3R 15026313 15026342 chr3R 15026418 15026448 6 106 3.0 2.5 2.8 1.6 135 chr3R 15026313 intergenic not near genes chr3R 15026380 intergenic not near genes chr3R 15026448 intergenic not near genes chr3R_6_15025001 chr3R_15025001 RAL-837 2151 chr3R 15041413 15041450 chr3R 15045200 15045238 Doc 6 3788 3.0 4.5 3.8 1.2 3825 chr3R 15041413 intergenic not near genes chr3R 15043326 intergenic not near genes chr3R 15045238 intergenic not near genes chr3R_6_15040001 chr3R_15040001 RAL-837 2152 chr3R 15058216 15058245 chr3R 15058311 15058350 8 102 3.5 1.5 2.5 2.3 134 chr3R 15058216 intron dpr9 - chr3R 15058283 intron dpr9 - chr3R 15058350 intron dpr9 - chr3R_8_15055001 chr3R_15055001 RAL-837 2153 chr3R 15079786 15079832 chr3R 15080047 15080078 pogo 17 259 0.5 1.0 0.8 9.4 292 chr3R 15079786 3` UTR CG6966 - chr3R 15079932 3` UTR CG6966 - chr3R 15080078 3` UTR CG6966 - chr3R_17_15075001 chr3R_15075001 RAL-837 2154 chr3R 15102489 15102527 chr3R 15109752 15109763 412 10 7268 3.0 4.5 3.8 2.1 7274 chr3R 15102489 intron CG42788 - chr3R 15106126 intron CG42788 - chr3R 15109763 intron CG42788 - chr3R_10_15105001 chr3R_15105001 RAL-837 2155 chr3R 15132045 15132082 chr3R 15135125 15135162 Juan 11 3073 6.5 8.0 7.2 1.3 3117 chr3R 15132045 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135162 3` UTR CG6912 - chr3R_11_15130001 chr3R_15130001 RAL-837 2156 chr3R 15143906 15143934 chr3R 15144109 15144137 9 203 6.0 2.0 4.0 1.8 231 chr3R 15143906 intron GlyS - chr3R 15144022 intron GlyS - chr3R 15144137 intron GlyS - chr3R_9_15140001 chr3R_15140001 RAL-837 2157 chr3R 15159136 15159173 chr3R 15159269 15159306 10 129 5.5 5.5 5.5 1.5 170 chr3R 15159136 intron Gyc88E + chr3R 15159221 intron Gyc88E + chr3R 15159306 intron Gyc88E + chr3R_10_15155001 chr3R_15155001 RAL-837 2158 chr3R 15162527 15162540 chr3R 15167315 15167328 F-element 6 4788 6.5 1.0 3.8 1.2 4801 chr3R 15162527 intron Gyc88E + chr3R 15164928 intron Gyc88E + chr3R 15167328 intron Gyc88E + chr3R_6_15160001 chr3R_15160001 RAL-837 2159 chr3R 15225279 15225331 chr3R 15225379 15225431 11 94 3.5 3.5 3.5 2.4 152 chr3R 15225279 5` UTR CG31344 - chr3R 15225355 intergenic CG31344 -,Caf1 + chr3R 15225431 intergenic CG31344 -,Caf1 + chr3R_11_15225001 chr3R_15225001 RAL-837 2160 chr3R 15285541 15285577 chr3R 15285677 15285713 5 135 2.0 2.5 2.2 1.6 172 chr3R 15285541 intron Tm1 + chr3R 15285627 intron Tm1 + chr3R 15285713 intron Tm1 + chr3R_5_15285001 chr3R_15285001 RAL-837 2161 chr3R 15387369 15387411 chr3R 15387509 15387552 10 134 5.0 5.0 5.0 1.7 183 chr3R 15387369 exon Rbp + chr3R 15387460 intron Rbp + chr3R 15387552 intron Rbp + chr3R_10_15385001 chr3R_15385001 RAL-837 2162 chr3R 15416244 15416279 chr3R 15416334 15416379 10 95 4.0 2.5 3.2 2.4 135 chr3R 15416244 3` UTR Atx2 + chr3R 15416312 3` UTR Atx2 + chr3R 15416379 3` UTR Atx2 + chr3R_10_15415001 chr3R_15415001 RAL-837 2163 chr3R 15504151 15504203 chr3R 15504261 15504313 23 101 2.0 1.5 1.8 8.2 162 chr3R 15504151 intergenic not near genes chr3R 15504232 intergenic not near genes chr3R 15504313 intergenic not near genes chr3R_23_15500001 chr3R_15500001 RAL-837 2164 chr3R 15594656 15594676 chr3R 15594759 15594779 5 103 0.0 7.0 3.5 1.1 123 chr3R 15594656 intergenic not near genes chr3R 15594718 intergenic not near genes chr3R 15594779 intergenic not near genes chr3R_5_15590001 chr3R_15590001 RAL-837 2165 chr3R 15601163 15601195 chr3R 15608685 15608737 412 15 7536 2.0 2.0 2.0 5.0 7574 chr3R 15601163 intergenic not near genes chr3R 15604950 intergenic not near genes chr3R 15608737 intergenic not near genes chr3R_15_15600001 chr3R_15600001 RAL-837 2166 chr3R 15618726 15618764 chr3R 15626206 15626258 blood 10 7491 3.0 8.5 5.8 1.5 7532 chr3R 15618726 intergenic not near genes chr3R 15622492 intergenic not near genes chr3R 15626258 intergenic not near genes chr3R_10_15620001 chr3R_15620001 RAL-837 2167 chr3R 15691176 15691327 chr3R 15691286 15691434 19 108 0.0 0.0 0.0 19.0 258 chr3R 15691176 intergenic not near genes chr3R 15691305 intergenic not near genes chr3R 15691434 intergenic not near genes chr3R_19_15690001 chr3R_15690001 RAL-837 2168 chr3R 15709614 15709664 chr3R 15709763 15709813 10 139 2.5 1.0 1.8 3.6 199 chr3R 15709614 intergenic not near genes chr3R 15709714 intergenic not near genes chr3R 15709813 intergenic not near genes chr3R_10_15705001 chr3R_15705001 RAL-837 2169 chr3R 15711269 15711275 chr3R 15711368 15711374 4 99 7.5 5.0 6.2 0.6 105 chr3R 15711269 intergenic not near genes chr3R 15711322 intergenic not near genes chr3R 15711374 intergenic not near genes chr3R_4_15710001 chr3R_15710001 RAL-837 2170 chr3R 15718413 15718430 chr3R 15724763 15724780 5 6349 18.0 12.0 15.0 0.3 6367 chr3R 15718413 intergenic not near genes chr3R 15721596 intergenic not near genes chr3R 15724780 intergenic not near genes chr3R_5_15720001 chr3R_15720001 RAL-837 2171 chr3R 15718432 15718444 chr3R 15724761 15724794 5 6341 15.5 12.0 13.8 0.3 6362 chr3R 15718432 intergenic not near genes chr3R 15721613 intergenic not near genes chr3R 15724794 intergenic not near genes chr3R_5_15720001 chr3R_15720001 RAL-837 2172 chr3R 15718272 15718295 chr3R 15724916 15724930 5 6639 21.0 21.5 21.2 0.2 6658 chr3R 15718272 intergenic not near genes chr3R 15721601 intergenic not near genes chr3R 15724930 intergenic not near genes chr3R_5_15720001 chr3R_15720001 RAL-837 2173 chr3R 15844088 15844133 chr3R 15844206 15844251 10 113 1.0 2.0 1.5 4.0 163 chr3R 15844088 exon spn-E + chr3R 15844170 3` UTR spn-E + chr3R 15844251 3` UTR spn-E + chr3R_10_15840001 chr3R_15840001 RAL-837 2174 chr3R 15868927 15868957 chr3R 15869027 15869037 7 97 6.0 0.0 3.0 1.8 110 chr3R 15868927 intron CG31183 - chr3R 15868982 intron CG31183 - chr3R 15869037 intron CG31183 - chr3R_7_15865001 chr3R_15865001 RAL-837 2175 chr3R 16048845 16048879 chr3R 16048941 16048941 14 91 2.0 2.5 2.2 4.4 96 chr3R 16048845 intron ird5 - chr3R 16048893 intron ird5 - chr3R 16048941 intron ird5 - chr3R_14_16045001 chr3R_16045001 RAL-837 2176 chr3R 16073427 16073475 chr3R 16073541 16073599 15 123 1.5 2.5 2.0 5.0 172 chr3R 16073427 intron Mhcl - chr3R 16073513 intron Mhcl - chr3R 16073599 intron Mhcl - chr3R_15_16070001 chr3R_16070001 RAL-837 2177 chr3R 16189391 16189441 chr3R 16189814 16189864 invader4 22 419 4.5 4.0 4.2 4.2 473 chr3R 16189391 intron sra + chr3R 16189628 intron sra + chr3R 16189864 intron sra + chr3R_22_16185001 chr3R_16185001 RAL-837 2178 chr3R 16253522 16253568 chr3R 16253628 16253669 4 93 0.0 1.0 0.5 2.7 147 chr3R 16253522 intron tara + chr3R 16253596 intron tara + chr3R 16253669 intron tara + chr3R_4_16250001 chr3R_16250001 RAL-837 2179 chr3R 16260795 16260920 chr3R 16260896 16261081 5 108 1.0 1.0 1.0 2.5 286 chr3R 16260795 intergenic tara + chr3R 16260938 intergenic bor - chr3R 16261081 intergenic bor - chr3R_5_16260001 chr3R_16260001 RAL-837 2180 chr3R 16275581 16275604 chr3R 16275916 16275937 5 334 3.0 9.0 6.0 0.7 356 chr3R 16275581 intron gish + chr3R 16275759 intron gish + chr3R 16275937 intron gish + chr3R_5_16275001 chr3R_16275001 RAL-837 2181 chr3R 16289899 16289941 chr3R 16289989 16290035 14 93 7.5 5.5 6.5 1.9 136 chr3R 16289899 intron gish + chr3R 16289967 intron gish + chr3R 16290035 intron gish + chr3R_14_16285001 chr3R_16285001 RAL-837 2182 chr3R 16298891 16298906 chr3R 16298965 16299010 6 98 0.0 3.5 1.8 2.1 119 chr3R 16298891 intron gish + chr3R 16298950 intron gish + chr3R 16299010 intron gish + chr3R_6_16295001 chr3R_16295001 RAL-837 2183 chr3R 16374314 16374328 chr3R 16374421 16374465 5 127 4.5 6.5 5.5 0.8 151 chr3R 16374314 intergenic ss - chr3R 16374390 intergenic ss - chr3R 16374465 3` UTR ss - chr3R_5_16370001 chr3R_16370001 RAL-837 2184 chr3R 16534431 16534454 chr3R 16534539 16534562 4 104 3.0 1.5 2.2 1.2 131 chr3R 16534431 intron CG42342 + chr3R 16534496 intron CG42342 + chr3R 16534562 intron CG42342 + chr3R_4_16530001 chr3R_16530001 RAL-837 2185 chr3R 16732129 16732175 chr3R 16732245 16732290 11 115 0.0 2.0 1.0 5.5 161 chr3R 16732129 intron Ubx - chr3R 16732210 intron Ubx - chr3R 16732290 intron Ubx - chr3R_11_16730001 chr3R_16730001 RAL-837 2186 chr3R 16756299 16756351 chr3R 16762510 16762562 diver 8 6202 2.5 2.0 2.2 2.5 6263 chr3R 16756299 intron bxd - chr3R 16759430 intron bxd - chr3R 16762562 intron bxd - chr3R_8_16755001 chr3R_16755001 RAL-837 2187 chr3R 16771597 16771644 chr3R 16771693 16771734 8 90 3.0 4.5 3.8 1.7 137 chr3R 16771597 intron bxd - chr3R 16771666 intron bxd - chr3R 16771734 intron bxd - chr3R_8_16770001 chr3R_16770001 RAL-837 2188 chr3R 16820233 16820274 chr3R 16820347 16820388 11 110 2.5 2.5 2.5 3.1 155 chr3R 16820233 intron abd-A - chr3R 16820310 intron abd-A - chr3R 16820388 intron abd-A - chr3R_11_16820001 chr3R_16820001 RAL-837 2189 chr3R 16848165 16848169 chr3R 16848316 16848320 4 151 8.0 6.5 7.2 0.5 155 chr3R 16848165 intron iab-8 - chr3R 16848242 intron iab-8 - chr3R 16848320 intron iab-8 - chr3R_4_16845001 chr3R_16845001 RAL-837 2190 chr3R 16848170 16848193 chr3R 16848299 16848299 7 129 4.0 5.5 4.8 1.2 129 chr3R 16848170 intron iab-8 - chr3R 16848234 intron iab-8 - chr3R 16848299 intron iab-8 - chr3R_7_16845001 chr3R_16845001 RAL-837 2191 chr3R 16961190 16961227 chr3R 16961299 16961336 13 108 1.5 4.5 3.0 3.2 146 chr3R 16961190 intron Abd-B - chr3R 16961263 intron Abd-B - chr3R 16961336 intron Abd-B - chr3R_13_16960001 chr3R_16960001 RAL-837 2192 chr3R 17184723 17184756 chr3R 17184817 17184852 8 92 3.0 5.0 4.0 1.6 129 chr3R 17184723 intron Mur89F - chr3R 17184788 intron Mur89F - chr3R 17184852 intron Mur89F - chr3R_8_17180001 chr3R_17180001 RAL-837 2193 chr3R 17268654 17268703 chr3R 17268796 17268809 14 138 2.0 2.0 2.0 4.7 155 chr3R 17268654 intergenic not near genes chr3R 17268732 intergenic not near genes chr3R 17268809 intergenic not near genes chr3R_14_17265001 chr3R_17265001 RAL-837 2194 chr3R 17290427 17290472 chr3R 17290533 17290548 9 100 3.5 6.5 5.0 1.5 121 chr3R 17290427 intergenic not near genes chr3R 17290488 intergenic not near genes chr3R 17290548 intergenic not near genes chr3R_9_17290001 chr3R_17290001 RAL-837 2195 chr3R 17294647 17294700 chr3R 17295095 17295153 BS 11 447 3.5 0.0 1.8 3.9 506 chr3R 17294647 intergenic not near genes chr3R 17294900 intergenic not near genes chr3R 17295153 intergenic not near genes chr3R_11_17290001 chr3R_17290001 RAL-837 2196 chr3R 17346678 17346703 chr3R 17348261 17348286 F-element 4 1583 5.5 5.5 5.5 0.6 1608 chr3R 17346678 intron beat-IIa - chr3R 17347482 intron beat-IIa - chr3R 17348286 intron beat-IIa - chr3R_4_17345001 chr3R_17345001 RAL-837 2197 chr3R 17346708 17346721 chr3R 17348246 17348274 F-element 6 1558 1.5 4.5 3.0 1.5 1566 chr3R 17346708 intron beat-IIa - chr3R 17347491 intron beat-IIa - chr3R 17348274 intron beat-IIa - chr3R_6_17345001 chr3R_17345001 RAL-837 2198 chr3R 17355473 17355523 chr3R 17355571 17355611 11 92 2.5 4.5 3.5 2.4 138 chr3R 17355473 intron beat-IIa - chr3R 17355542 intron beat-IIa - chr3R 17355611 intron beat-IIa - chr3R_11_17355001 chr3R_17355001 RAL-837 2199 chr3R 17359005 17359052 chr3R 17359103 17359126 10 94 5.0 3.5 4.2 1.9 121 chr3R 17359005 intron beat-IIa - chr3R 17359066 intron beat-IIa - chr3R 17359126 intron beat-IIa - chr3R_10_17355001 chr3R_17355001 RAL-837 2200 chr3R 17394435 17394463 chr3R 17394604 17394631 14 176 4.0 4.0 4.0 2.8 196 chr3R 17394435 intron CREG - chr3R 17394533 intron CREG - chr3R 17394631 5` UTR CREG - chr3R_14_17390001 chr3R_17390001 RAL-837 2201 chr3R 17452651 17452687 chr3R 17452742 17452757 8 86 0.0 1.0 0.5 5.3 106 chr3R 17452651 intergenic not near genes chr3R 17452704 intergenic not near genes chr3R 17452757 intergenic not near genes chr3R_8_17450001 chr3R_17450001 RAL-837 2202 chr3R 17461178 17461231 chr3R 17461280 17461333 10 98 5.0 1.5 3.2 2.4 155 chr3R 17461178 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461333 intergenic not near genes chr3R_10_17460001 chr3R_17460001 RAL-837 2203 chr3R 17497941 17497991 chr3R 17498047 17498082 18 103 2.5 2.0 2.2 5.6 141 chr3R 17497941 intron Dscam3 - chr3R 17498012 intron Dscam3 - chr3R 17498082 intron Dscam3 - chr3R_18_17495001 chr3R_17495001 RAL-837 2204 chr3R 17500627 17500645 chr3R 17501204 17501227 5 578 2.5 6.5 4.5 0.9 600 chr3R 17500627 intron Dscam3 - chr3R 17500927 intron Dscam3 - chr3R 17501227 intron Dscam3 - chr3R_5_17500001 chr3R_17500001 RAL-837 2205 chr3R 17521576 17521581 chr3R 17521724 17521761 5 165 2.0 4.0 3.0 1.2 185 chr3R 17521576 intergenic not near genes chr3R 17521668 intergenic not near genes chr3R 17521761 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-837 2206 chr3R 17591277 17591306 chr3R 17591733 17591762 F-element 5 451 4.5 4.5 4.5 0.9 485 chr3R 17591277 intergenic not near genes chr3R 17591520 intergenic not near genes chr3R 17591762 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-837 2207 chr3R 17638299 17638339 chr3R 17638805 17638829 roo 10 501 5.0 7.5 6.2 1.4 530 chr3R 17638299 intron CG43175 + chr3R 17638564 intron CG43175 + chr3R 17638829 intron,intron CG43175 +,CR45222 + chr3R_10_17635001 chr3R_17635001 RAL-837 2208 chr3R 17645684 17645710 chr3R 17645834 17645860 4 150 4.5 4.5 4.5 0.7 176 chr3R 17645684 intergenic CG43175 + chr3R 17645772 intergenic not near genes chr3R 17645860 intergenic not near genes chr3R_4_17645001 chr3R_17645001 RAL-837 2209 chr3R 17653065 17653115 chr3R 17653175 17653225 7 107 1.0 2.0 1.5 2.8 160 chr3R 17653065 intron,intron CG14322 +,CR45223 - chr3R 17653145 intron,intron CG14322 +,CR45223 - chr3R 17653225 intron,intron CG14322 +,CR45223 - chr3R_7_17650001 chr3R_17650001 RAL-837 2210 chr3R 17714653 17714674 chr3R 17714753 17714774 6 100 8.5 4.0 6.2 0.8 121 chr3R 17714653 intron osa - chr3R 17714714 intron osa - chr3R 17714774 intron osa - chr3R_6_17710001 chr3R_17710001 RAL-837 2211 chr3R 17725064 17725073 chr3R 17725178 17725187 5 113 5.5 0.0 2.8 1.3 123 chr3R 17725064 intergenic Atg8b - chr3R 17725126 intergenic Atg8b - chr3R 17725187 intergenic Atg8b - chr3R_5_17725001 chr3R_17725001 RAL-837 2212 chr3R 17734823 17734858 chr3R 17734956 17734992 16 132 5.5 2.0 3.8 3.3 169 chr3R 17734823 intergenic CG14321 + chr3R 17734908 intergenic not near genes chr3R 17734992 intergenic not near genes chr3R_16_17730001 chr3R_17730001 RAL-837 2213 chr3R 17823211 17823219 chr3R 17823296 17823324 5 94 6.0 3.5 4.8 0.9 113 chr3R 17823211 intron tinc + chr3R 17823268 intron tinc + chr3R 17823324 intron tinc + chr3R_5_17820001 chr3R_17820001 RAL-837 2214 chr3R 17925840 17925875 chr3R 17927327 17927341 hobo 9 1484 4.5 12.0 8.2 1.0 1501 chr3R 17925840 intron cpo + chr3R 17926590 intron cpo + chr3R 17927341 intron cpo + chr3R_9_17925001 chr3R_17925001 RAL-837 2215 chr3R 18041748 18041774 chr3R 18041833 18041845 7 88 2.0 1.0 1.5 2.8 97 chr3R 18041748 intergenic not near genes chr3R 18041796 intergenic not near genes chr3R 18041845 intergenic not near genes chr3R_7_18040001 chr3R_18040001 RAL-837 2216 chr3R 18061584 18061610 chr3R 18063152 18063198 F-element 10 1575 6.5 4.0 5.2 1.6 1614 chr3R 18061584 intergenic not near genes chr3R 18062391 intergenic not near genes chr3R 18063198 intergenic not near genes chr3R_10_18060001 chr3R_18060001 RAL-837 2217 chr3R 18067961 18068007 chr3R 18068077 18068099 6 109 0.0 3.5 1.8 2.1 138 chr3R 18067961 intergenic not near genes chr3R 18068030 intergenic not near genes chr3R 18068099 intergenic not near genes chr3R_6_18065001 chr3R_18065001 RAL-837 2218 chr3R 18122875 18122913 chr3R 18122972 18123010 9 95 3.5 4.5 4.0 1.8 135 chr3R 18122875 intron sr + chr3R 18122942 intron sr + chr3R 18123010 intron sr + chr3R_9_18120001 chr3R_18120001 RAL-837 2219 chr3R 18136216 18136251 chr3R 18136350 18136364 5 129 2.0 2.5 2.2 1.6 148 chr3R 18136216 intergenic not near genes chr3R 18136290 intergenic not near genes chr3R 18136364 intergenic not near genes chr3R_5_18135001 chr3R_18135001 RAL-837 2220 chr3R 18142102 18142146 chr3R 18142287 18142338 8 188 3.0 6.0 4.5 1.5 236 chr3R 18142102 intergenic not near genes chr3R 18142220 intergenic not near genes chr3R 18142338 intergenic not near genes chr3R_8_18140001 chr3R_18140001 RAL-837 2221 chr3R 18279625 18279656 chr3R 18279717 18279763 8 98 4.5 3.5 4.0 1.6 138 chr3R 18279625 intron eIF-1A + chr3R 18279694 intron eIF-1A + chr3R 18279763 intron eIF-1A + chr3R_8_18275001 chr3R_18275001 RAL-837 2222 chr3R 18331765 18331776 chr3R 18333279 18333279 hopper2 6 1512 12.0 7.0 9.5 0.6 1514 chr3R 18331765 3` UTR CG15803 - chr3R 18332522 intron CG15803 - chr3R 18333279 3` UTR CG15803 - chr3R_6_18330001 chr3R_18330001 RAL-837 2223 chr3R 18379620 18379635 chr3R 18379946 18379961 5 325 6.0 6.5 6.2 0.7 341 chr3R 18379620 intron CG7675 - chr3R 18379790 intron CG7675 - chr3R 18379961 intron CG7675 - chr3R_5_18375001 chr3R_18375001 RAL-837 2224 chr3R 18379642 18379657 chr3R 18379938 18379980 6 320 3.0 4.5 3.8 1.2 338 chr3R 18379642 intron CG7675 - chr3R 18379811 intron CG7675 - chr3R 18379980 intron CG7675 - chr3R_6_18375001 chr3R_18375001 RAL-837 2225 chr3R 18464296 18464338 chr3R 18464454 18464480 4 154 0.0 3.0 1.5 1.6 184 chr3R 18464296 intron fru - chr3R 18464388 intron fru - chr3R 18464480 intron fru - chr3R_4_18460001 chr3R_18460001 RAL-837 2226 chr3R 18575578 18575598 chr3R 18575677 18575702 5 101 4.5 7.0 5.8 0.7 124 chr3R 18575578 intron,intron CG7694 +,fray + chr3R 18575640 intron,intron CG7694 +,fray + chr3R 18575702 intron,intron CG7694 +,fray + chr3R_5_18575001 chr3R_18575001 RAL-837 2227 chr3R 18605432 18605446 chr3R 18605668 18605687 7 236 2.5 2.5 2.5 2.0 255 chr3R 18605432 intron,intron qin +,CG14304 - chr3R 18605560 intron,intron qin +,CG14304 - chr3R 18605687 intron,intron qin +,CG14304 - chr3R_7_18605001 chr3R_18605001 RAL-837 2228 chr3R 18606498 18606505 chr3R 18610750 18610757 F-element 4 4252 8.0 10.0 9.0 0.4 4259 chr3R 18606498 intron,intron qin +,CG14304 - chr3R 18608628 intron,intron qin +,CG14304 - chr3R 18610757 intron,intron qin +,CG14304 - chr3R_4_18605001 chr3R_18605001 RAL-837 2229 chr3R 18606508 18606530 chr3R 18610741 18610782 F-element 11 4250 5.0 7.5 6.2 1.5 4274 chr3R 18606508 intron,intron qin +,CG14304 - chr3R 18608645 intron,intron qin +,CG14304 - chr3R 18610782 intron,intron qin +,CG14304 - chr3R_11_18605001 chr3R_18605001 RAL-837 2230 chr3R 18618248 18618297 chr3R 18618353 18618401 10 104 3.0 4.0 3.5 2.2 153 chr3R 18618248 intron,intron qin +,CG14304 - chr3R 18618324 intron,intron qin +,CG14304 - chr3R 18618401 intron,intron qin +,CG14304 - chr3R_10_18615001 chr3R_18615001 RAL-837 2231 chr3R 18627962 18627973 chr3R 18628067 18628078 4 105 4.0 0.0 2.0 1.3 116 chr3R 18627962 intron qin + chr3R 18628020 intron qin + chr3R 18628078 intron qin + chr3R_4_18625001 chr3R_18625001 RAL-837 2232 chr3R 18628861 18629030 chr3R 18629005 18629140 8 116 0.5 0.5 0.5 5.3 279 chr3R 18628861 intron qin + chr3R 18629000 intron qin + chr3R 18629140 intron qin + chr3R_8_18625001 chr3R_18625001 RAL-837 2233 chr3R 18670375 18670407 chr3R 18670488 18670520 10 110 5.5 6.0 5.8 1.5 145 chr3R 18670375 intron CG7702 + chr3R 18670448 intron CG7702 + chr3R 18670520 intron CG7702 + chr3R_10_18670001 chr3R_18670001 RAL-837 2234 chr3R 18721040 18721068 chr3R 18721197 18721219 8 156 1.0 3.5 2.2 2.5 179 chr3R 18721040 intron Cha + chr3R 18721130 intron Cha + chr3R 18721219 intron Cha + chr3R_8_18720001 chr3R_18720001 RAL-837 2235 chr3R 18730007 18730037 chr3R 18730103 18730133 7 94 2.5 3.0 2.8 1.8 126 chr3R 18730007 exon Cha + chr3R 18730070 intron Cha + chr3R 18730133 exon Cha + chr3R_7_18730001 chr3R_18730001 RAL-837 2236 chr3R 18766772 18766800 chr3R 18766858 18766898 6 94 3.0 4.0 3.5 1.3 126 chr3R 18766772 intron CG7720 - chr3R 18766835 intron CG7720 - chr3R 18766898 intron CG7720 - chr3R_6_18765001 chr3R_18765001 RAL-837 2237 chr3R 18770278 18770321 chr3R 18770380 18770412 13 95 2.0 4.0 3.0 3.2 134 chr3R 18770278 intron CG7720 - chr3R 18770345 intron CG7720 - chr3R 18770412 intron CG7720 - chr3R_13_18770001 chr3R_18770001 RAL-837 2238 chr3R 18792784 18792832 chr3R 18792887 18792935 4 100 5.0 0.0 2.5 1.1 151 chr3R 18792784 intron CG7720 - chr3R 18792860 intron CG7720 - chr3R 18792935 intron CG7720 - chr3R_4_18790001 chr3R_18790001 RAL-837 2239 chr3R 18807309 18807333 chr3R 18807406 18807430 6 96 2.5 0.0 1.2 2.7 121 chr3R 18807309 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807430 intron CG18208 - chr3R_6_18805001 chr3R_18805001 RAL-837 2240 chr3R 18808464 18808508 chr3R 18808561 18808605 6 97 2.0 6.0 4.0 1.2 141 chr3R 18808464 intron CG18208 - chr3R 18808534 intron CG18208 - chr3R 18808605 intron CG18208 - chr3R_6_18805001 chr3R_18805001 RAL-837 2241 chr3R 18812065 18812106 chr3R 18812154 18812204 12 97 3.5 7.0 5.2 1.9 139 chr3R 18812065 intron CG18208 - chr3R 18812134 intron CG18208 - chr3R 18812204 intron CG18208 - chr3R_12_18810001 chr3R_18810001 RAL-837 2242 chr3R 18817488 18817534 chr3R 18817606 18817617 12 111 0.0 0.5 0.2 10.0 129 chr3R 18817488 intron CG18208 - chr3R 18817552 intron CG18208 - chr3R 18817617 intron CG18208 - chr3R_12_18815001 chr3R_18815001 RAL-837 2243 chr3R 18822177 18822211 chr3R 18822451 18822479 10 278 4.0 5.0 4.5 1.8 302 chr3R 18822177 intron CG18208 - chr3R 18822328 intron CG18208 - chr3R 18822479 intron CG18208 - chr3R_10_18820001 chr3R_18820001 RAL-837 2244 chr3R 18836819 18836863 chr3R 18836943 18836986 17 123 4.0 4.0 4.0 3.4 167 chr3R 18836819 intron CG18208 - chr3R 18836902 intron CG18208 - chr3R 18836986 intron CG18208 - chr3R_17_18835001 chr3R_18835001 RAL-837 2245 chr3R 18916195 18916224 chr3R 18916470 18916489 7 273 3.0 5.5 4.2 1.3 294 chr3R 18916195 intron Xrp1 + chr3R 18916342 intron Xrp1 + chr3R 18916489 intron Xrp1 + chr3R_7_18915001 chr3R_18915001 RAL-837 2246 chr3R 19013004 19013052 chr3R 19013108 19013128 11 100 2.0 4.0 3.0 2.8 124 chr3R 19013004 intron gukh + chr3R 19013066 intron gukh + chr3R 19013128 intron gukh + chr3R_11_19010001 chr3R_19010001 RAL-837 2247 chr3R 19136409 19136443 chr3R 19139803 19139809 Bari1 4 3374 46.5 23.5 35.0 0.1 3400 chr3R 19136409 exon Cyp12a4 + chr3R 19138109 intergenic not near genes chr3R 19139809 3` UTR Ppcs - chr3R_4_19135001 chr3R_19135001 RAL-837 2248 chr3R 19140265 19140281 chr3R 19140733 19140747 5 465 3.0 3.0 3.0 1.2 482 chr3R 19140265 3` UTR Ppcs - chr3R 19140506 3` UTR Ppcs - chr3R 19140747 3` UTR Ppcs - chr3R_5_19140001 chr3R_19140001 RAL-837 2249 chr3R 19140282 19140296 chr3R 19140730 19140747 4 456 1.5 2.5 2.0 1.3 465 chr3R 19140282 3` UTR Ppcs - chr3R 19140514 3` UTR Ppcs - chr3R 19140747 3` UTR Ppcs - chr3R_4_19140001 chr3R_19140001 RAL-837 2250 chr3R 19302194 19302212 chr3R 19302306 19302333 5 119 0.0 6.0 3.0 1.2 139 chr3R 19302194 intergenic not near genes chr3R 19302264 intergenic Dl - chr3R 19302333 intergenic Dl - chr3R_5_19300001 chr3R_19300001 RAL-837 2251 chr3R 19396343 19396384 chr3R 19396444 19396490 7 100 7.0 4.5 5.8 1.0 147 chr3R 19396343 intron Ino80 - chr3R 19396416 intron Ino80 - chr3R 19396490 intron Ino80 - chr3R_7_19395001 chr3R_19395001 RAL-837 2252 chr3R 19494398 19494408 chr3R 19494498 19494508 4 100 4.0 4.0 4.0 0.8 110 chr3R 19494398 intron Dys + chr3R 19494453 intron Dys + chr3R 19494508 intron Dys + chr3R_4_19490001 chr3R_19490001 RAL-837 2253 chr3R 19602549 19602598 chr3R 19602649 19602690 11 95 4.5 2.5 3.5 2.4 141 chr3R 19602549 exon CG7333 + chr3R 19602620 3` UTR CG7333 + chr3R 19602690 intergenic CG7333 + chr3R_11_19600001 chr3R_19600001 RAL-837 2254 chr3R 19651708 19651755 chr3R 19651804 19651851 8 91 3.0 3.5 3.2 1.9 143 chr3R 19651708 exon CG31219 + chr3R 19651780 exon CG31219 + chr3R 19651851 intron CG31219 + chr3R_8_19650001 chr3R_19650001 RAL-837 2255 chr3R 19702321 19702340 chr3R 19702402 19702441 7 96 5.5 4.0 4.8 1.2 120 chr3R 19702321 intergenic not near genes chr3R 19702381 intergenic not near genes chr3R 19702441 intergenic not near genes chr3R_7_19700001 chr3R_19700001 RAL-837 2256 chr3R 19716196 19716235 chr3R 19716293 19716332 19 92 2.0 0.0 1.0 9.5 136 chr3R 19716196 intergenic CG34286 - chr3R 19716264 intergenic CG34286 - chr3R 19716332 intergenic CG34286 - chr3R_19_19715001 chr3R_19715001 RAL-837 2257 chr3R 19750029 19750063 chr3R 19750129 19750160 7 99 2.0 3.0 2.5 2.0 131 chr3R 19750029 intron GluClalpha + chr3R 19750094 intron GluClalpha + chr3R 19750160 intron GluClalpha + chr3R_7_19750001 chr3R_19750001 RAL-837 2258 chr3R 19827509 19827557 chr3R 19827615 19827663 9 103 4.5 2.0 3.2 2.1 154 chr3R 19827509 intron bnl - chr3R 19827586 intron bnl - chr3R 19827663 exon bnl - chr3R_9_19825001 chr3R_19825001 RAL-837 2259 chr3R 19846940 19846994 chr3R 19847120 19847175 12 178 0.5 2.0 1.2 5.5 235 chr3R 19846940 intergenic CG4662 + chr3R 19847058 intergenic CG4662 + chr3R 19847175 intergenic CG4662 + chr3R_12_19845001 chr3R_19845001 RAL-837 2260 chr3R 19953930 19953980 chr3R 19954027 19954043 9 84 2.0 2.5 2.2 2.8 113 chr3R 19953930 intron Hs6st - chr3R 19953986 intron Hs6st - chr3R 19954043 intron Hs6st - chr3R_9_19950001 chr3R_19950001 RAL-837 2261 chr3R 20109540 20109569 chr3R 20114749 20114774 copia 5 5214 2.0 6.0 4.0 1.0 5234 chr3R 20109540 intergenic not near genes chr3R 20112157 intergenic not near genes chr3R 20114774 intergenic CG10887 + chr3R_5_20110001 chr3R_20110001 RAL-837 2262 chr3R 20124552 20124571 chr3R 20124658 20124672 4 104 9.0 4.5 6.8 0.5 120 chr3R 20124552 intergenic not near genes chr3R 20124612 intergenic not near genes chr3R 20124672 intergenic not near genes chr3R_4_20120001 chr3R_20120001 RAL-837 2263 chr3R 20124575 20124600 chr3R 20124656 20124707 9 103 3.5 4.0 3.8 1.9 132 chr3R 20124575 intergenic not near genes chr3R 20124641 intergenic not near genes chr3R 20124707 intergenic not near genes chr3R_9_20120001 chr3R_20120001 RAL-837 2264 chr3R 20156681 20156715 chr3R 20165868 20165905 roo 11 9181 3.5 5.0 4.2 2.1 9224 chr3R 20156681 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165905 intergenic not near genes chr3R_11_20160001 chr3R_20160001 RAL-837 2265 chr3R 20205552 20205572 chr3R 20205694 20205714 10 140 4.5 3.5 4.0 2.0 162 chr3R 20205552 intron Nlg4 + chr3R 20205633 intron Nlg4 + chr3R 20205714 intron Nlg4 + chr3R_10_20205001 chr3R_20205001 RAL-837 2266 chr3R 20205574 20205596 chr3R 20205685 20205738 6 137 2.0 1.0 1.5 2.4 164 chr3R 20205574 intron Nlg4 + chr3R 20205656 intron Nlg4 + chr3R 20205738 intron Nlg4 + chr3R_6_20205001 chr3R_20205001 RAL-837 2267 chr3R 20205918 20205935 chr3R 20206022 20206039 5 104 0.0 4.0 2.0 1.7 121 chr3R 20205918 intron Nlg4 + chr3R 20205978 intron Nlg4 + chr3R 20206039 intron Nlg4 + chr3R_5_20205001 chr3R_20205001 RAL-837 2268 chr3R 20242565 20242610 chr3R 20242682 20242733 9 119 3.0 3.0 3.0 2.2 168 chr3R 20242565 intron Nlg4 + chr3R 20242649 intron Nlg4 + chr3R 20242733 intron Nlg4 + chr3R_9_20240001 chr3R_20240001 RAL-837 2269 chr3R 20245269 20245298 chr3R 20248899 20248925 F-element 12 3629 0.0 0.5 0.2 10.0 3656 chr3R 20245269 3` UTR Nlg4 + chr3R 20247097 intergenic not near genes chr3R 20248925 intergenic not near genes chr3R_12_20245001 chr3R_20245001 RAL-837 2270 chr3R 20252225 20252253 chr3R 20252314 20252351 9 94 0.0 1.0 0.5 6.0 126 chr3R 20252225 intergenic not near genes chr3R 20252288 intergenic cic + chr3R 20252351 intergenic cic + chr3R_9_20250001 chr3R_20250001 RAL-837 2271 chr3R 20266501 20266543 chr3R 20272992 20273026 Burdock 16 6484 1.5 7.5 4.5 2.9 6525 chr3R 20266501 intron cic + chr3R 20269764 intron cic + chr3R 20273026 intron cic + chr3R_16_20265001 chr3R_20265001 RAL-837 2272 chr3R 20308167 20308213 chr3R 20308275 20308328 6 108 4.0 0.0 2.0 2.0 161 chr3R 20308167 intergenic not near genes chr3R 20308248 intergenic not near genes chr3R 20308328 intergenic not near genes chr3R_6_20305001 chr3R_20305001 RAL-837 2273 chr3R 20330976 20331025 chr3R 20331482 20331531 roo 12 505 4.0 4.5 4.2 2.3 555 chr3R 20330976 intergenic Sirt2 + chr3R 20331254 intergenic Sirt2 + chr3R 20331531 intergenic not near genes chr3R_12_20330001 chr3R_20330001 RAL-837 2274 chr3R 20406377 20406504 chr3R 20406475 20406606 11 113 1.0 0.5 0.8 6.1 229 chr3R 20406377 intron Gfrl - chr3R 20406492 intron Gfrl - chr3R 20406606 intron Gfrl - chr3R_11_20405001 chr3R_20405001 RAL-837 2275 chr3R 20409192 20409237 chr3R 20409318 20409365 11 127 3.0 4.0 3.5 2.4 173 chr3R 20409192 intron,3` UTR Gfrl -,CG10881 + chr3R 20409278 intron Gfrl - chr3R 20409365 intron Gfrl - chr3R_11_20405001 chr3R_20405001 RAL-837 2276 chr3R 20438683 20438687 chr3R 20438865 20438869 4 182 2.5 10.0 6.2 0.6 186 chr3R 20438683 intron Gfrl - chr3R 20438776 intron Gfrl - chr3R 20438869 intron Gfrl - chr3R_4_20435001 chr3R_20435001 RAL-837 2277 chr3R 20482426 20482451 chr3R 20482510 20482512 11 93 0.5 4.0 2.2 3.4 86 chr3R 20482426 intron Gfrl - chr3R 20482469 intron Gfrl - chr3R 20482512 intron Gfrl - chr3R_11_20480001 chr3R_20480001 RAL-837 2278 chr3R 20512324 20512362 chr3R 20512427 20512454 5 101 6.5 3.5 5.0 0.8 130 chr3R 20512324 intron CG4288 - chr3R 20512389 5` UTR CG4288 - chr3R 20512454 5` UTR CG4288 - chr3R_5_20510001 chr3R_20510001 RAL-837 2279 chr3R 20564108 20564119 chr3R 20564481 20564492 5 372 7.5 3.5 5.5 0.8 384 chr3R 20564108 intron CG5191 + chr3R 20564300 intron CG5191 + chr3R 20564492 intron CG5191 + chr3R_5_20560001 chr3R_20560001 RAL-837 2280 chr3R 20564122 20564135 chr3R 20564480 20564508 6 362 4.5 3.5 4.0 1.2 386 chr3R 20564122 intron CG5191 + chr3R 20564315 intron CG5191 + chr3R 20564508 intron CG5191 + chr3R_6_20560001 chr3R_20560001 RAL-837 2281 chr3R 20564136 20564144 chr3R 20564479 20564517 5 367 4.5 3.5 4.0 1.0 381 chr3R 20564136 intron CG5191 + chr3R 20564326 intron CG5191 + chr3R 20564517 intron CG5191 + chr3R_5_20560001 chr3R_20560001 RAL-837 2282 chr3R 20594461 20594512 chr3R 20594571 20594616 14 106 5.0 0.0 2.5 4.0 155 chr3R 20594461 intron bon + chr3R 20594538 intron bon + chr3R 20594616 intron bon + chr3R_14_20590001 chr3R_20590001 RAL-837 2283 chr3R 20675742 20675786 chr3R 20675866 20675910 11 122 7.0 1.0 4.0 2.2 168 chr3R 20675742 intergenic CG4000 - chr3R 20675826 intergenic CG4000 - chr3R 20675910 intergenic CG4000 - chr3R_11_20675001 chr3R_20675001 RAL-837 2284 chr3R 20682540 20682589 chr3R 20682814 20682856 12 267 1.5 5.0 3.2 2.9 316 chr3R 20682540 intergenic not near genes chr3R 20682698 intergenic not near genes chr3R 20682856 intergenic not near genes chr3R_12_20680001 chr3R_20680001 RAL-837 2285 chr3R 20684195 20684244 chr3R 20684299 20684348 16 103 7.5 6.5 7.0 2.0 153 chr3R 20684195 intergenic not near genes chr3R 20684272 intergenic not near genes chr3R 20684348 intergenic not near genes chr3R_16_20680001 chr3R_20680001 RAL-837 2286 chr3R 20708732 20708782 chr3R 20708837 20708887 9 104 1.5 2.0 1.8 3.2 155 chr3R 20708732 intron Oamb - chr3R 20708810 intron Oamb - chr3R 20708887 intron Oamb - chr3R_9_20705001 chr3R_20705001 RAL-837 2287 chr3R 20730926 20730943 chr3R 20731037 20731038 8 108 6.0 1.5 3.8 1.7 112 chr3R 20730926 intergenic not near genes chr3R 20730982 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R_8_20730001 chr3R_20730001 RAL-837 2288 chr3R 20787417 20787458 chr3R 20787528 20787569 10 107 3.0 7.0 5.0 1.7 152 chr3R 20787417 intron Syp + chr3R 20787493 intron Syp + chr3R 20787569 intron Syp + chr3R_10_20785001 chr3R_20785001 RAL-837 2289 chr3R 20854474 20854498 chr3R 20859284 20859305 Doc 6 4808 6.5 4.0 5.2 1.0 4831 chr3R 20854474 intron Ir93a - chr3R 20856890 intron Ir93a - chr3R 20859305 exon Ir93a - chr3R_6_20855001 chr3R_20855001 RAL-837 2290 chr3R 20865844 20865857 chr3R 20865911 20865933 4 82 2.5 3.0 2.8 1.1 89 chr3R 20865844 intron CG3822 - chr3R 20865888 intron CG3822 - chr3R 20865933 exon CG3822 - chr3R_4_20865001 chr3R_20865001 RAL-837 2291 chr3R 20870236 20870284 chr3R 20870341 20870389 15 101 2.0 5.5 3.8 3.1 153 chr3R 20870236 intergenic not near genes chr3R 20870312 intergenic not near genes chr3R 20870389 intergenic not near genes chr3R_15_20870001 chr3R_20870001 RAL-837 2292 chr3R 20899895 20899936 chr3R 20900011 20900052 11 115 3.0 4.0 3.5 2.4 157 chr3R 20899895 intergenic not near genes chr3R 20899974 intergenic not near genes chr3R 20900052 intergenic not near genes chr3R_11_20895001 chr3R_20895001 RAL-837 2293 chr3R 20901642 20901682 chr3R 20901765 20901805 10 118 1.5 5.0 3.2 2.4 163 chr3R 20901642 intergenic CG5621 + chr3R 20901724 intergenic CG5621 + chr3R 20901805 intergenic CG5621 + chr3R_10_20900001 chr3R_20900001 RAL-837 2294 chr3R 20942795 20942840 chr3R 20942891 20942905 5 87 3.0 4.5 3.8 1.0 110 chr3R 20942795 intron CG31191 - chr3R 20942850 intron CG31191 - chr3R 20942905 intron CG31191 - chr3R_5_20940001 chr3R_20940001 RAL-837 2295 chr3R 20979465 20979516 chr3R 20979561 20979611 15 94 3.0 3.0 3.0 3.8 146 chr3R 20979465 intron Calx + chr3R 20979538 intron Calx + chr3R 20979611 intron Calx + chr3R_15_20975001 chr3R_20975001 RAL-837 2296 chr3R 21013993 21014044 chr3R 21014091 21014122 13 91 2.0 3.5 2.8 3.4 129 chr3R 21013993 3` UTR Calx + chr3R 21014058 3` UTR Calx + chr3R 21014122 3` UTR Calx + chr3R_13_21010001 chr3R_21010001 RAL-837 2297 chr3R 21020380 21020431 chr3R 21020476 21020520 15 91 3.0 3.5 3.2 3.6 140 chr3R 21020380 3` UTR Rlip + chr3R 21020450 3` UTR Rlip + chr3R 21020520 3` UTR Rlip + chr3R_15_21020001 chr3R_21020001 RAL-837 2298 chr3R 21108018 21108059 chr3R 21108299 21108333 7 275 3.5 3.5 3.5 1.6 315 chr3R 21108018 intergenic Sec15 -,rtet + chr3R 21108176 intergenic Sec15 -,rtet + chr3R 21108333 intergenic rtet +,Sec15 - chr3R_7_21105001 chr3R_21105001 RAL-837 2299 chr3R 21132611 21132636 chr3R 21132714 21132740 7 100 5.5 0.0 2.8 1.8 129 chr3R 21132611 3` UTR Ice2 + chr3R 21132676 3` UTR Ice2 + chr3R 21132740 3` UTR CG7009 - chr3R_7_21130001 chr3R_21130001 RAL-837 2300 chr3R 21141679 21141706 chr3R 21150153 21150171 Tirant 7 8480 2.5 2.0 2.2 2.2 8492 chr3R 21141679 intron SNF4Agamma + chr3R 21145925 intron SNF4Agamma + chr3R 21150171 intron SNF4Agamma + chr3R_7_21145001 chr3R_21145001 RAL-837 2301 chr3R 21154530 21154579 chr3R 21154755 21154797 5 217 4.0 0.0 2.0 1.7 267 chr3R 21154530 intron SNF4Agamma + chr3R 21154664 intron SNF4Agamma + chr3R 21154797 intron SNF4Agamma + chr3R_5_21150001 chr3R_21150001 RAL-837 2302 chr3R 21183240 21183254 chr3R 21183338 21183352 4 98 3.0 6.5 4.8 0.7 112 chr3R 21183240 intron SNF4Agamma + chr3R 21183296 intron SNF4Agamma + chr3R 21183352 intron SNF4Agamma + chr3R_4_21180001 chr3R_21180001 RAL-837 2303 chr3R 21239824 21239953 chr3R 21239935 21240049 5 102 0.5 0.5 0.5 3.3 225 chr3R 21239824 intergenic not near genes chr3R 21239936 intergenic not near genes chr3R 21240049 intergenic not near genes chr3R_5_21235001 chr3R_21235001 RAL-837 2304 chr3R 21240429 21240476 chr3R 21240541 21240585 13 106 2.5 1.0 1.8 4.6 156 chr3R 21240429 intergenic not near genes chr3R 21240507 intergenic not near genes chr3R 21240585 intergenic not near genes chr3R_13_21240001 chr3R_21240001 RAL-837 2305 chr3R 21245846 21245861 chr3R 21245940 21245965 7 103 9.0 6.0 7.5 0.8 119 chr3R 21245846 intergenic CG5892 + chr3R 21245906 intergenic CG5892 + chr3R 21245965 intergenic not near genes chr3R_7_21245001 chr3R_21245001 RAL-837 2306 chr3R 21471996 21472030 chr3R 21472097 21472106 6 92 5.0 5.0 5.0 1.0 110 chr3R 21471996 intergenic not near genes chr3R 21472051 intergenic not near genes chr3R 21472106 intergenic not near genes chr3R_6_21470001 chr3R_21470001 RAL-837 2307 chr3R 21475975 21476017 chr3R 21476083 21476125 12 102 4.0 4.0 4.0 2.4 150 chr3R 21475975 intergenic not near genes chr3R 21476050 intergenic not near genes chr3R 21476125 intergenic not near genes chr3R_12_21475001 chr3R_21475001 RAL-837 2308 chr3R 21479034 21479048 chr3R 21479355 21479367 6 321 6.5 6.0 6.2 0.8 333 chr3R 21479034 intergenic not near genes chr3R 21479200 intergenic not near genes chr3R 21479367 intergenic not near genes chr3R_6_21475001 chr3R_21475001 RAL-837 2309 chr3R 21491170 21491192 chr3R 21491313 21491335 6 142 10.5 10.0 10.2 0.5 165 chr3R 21491170 intergenic not near genes chr3R 21491252 intergenic not near genes chr3R 21491335 intergenic not near genes chr3R_6_21490001 chr3R_21490001 RAL-837 2310 chr3R 21506860 21506914 chr3R 21506966 21506978 9 98 0.5 9.0 4.8 1.6 118 chr3R 21506860 intron C15 + chr3R 21506919 intron C15 + chr3R 21506978 intron C15 + chr3R_9_21505001 chr3R_21505001 RAL-837 2311 chr3R 21519970 21520147 chr3R 21520090 21520201 22 113 4.5 4.5 4.5 4.0 231 chr3R 21519970 intergenic not near genes chr3R 21520086 intergenic not near genes chr3R 21520201 intergenic not near genes chr3R_22_21520001 chr3R_21520001 RAL-837 2312 chr3R 21527793 21527842 chr3R 21528153 21528202 18 360 1.0 3.0 2.0 6.0 409 chr3R 21527793 3` UTR CG7956 + chr3R 21527998 3` UTR CG7956 + chr3R 21528202 3` UTR CG7956 + chr3R_18_21525001 chr3R_21525001 RAL-837 2313 chr3R 21569819 21569872 chr3R 21569920 21569973 12 90 4.5 1.5 3.0 3.0 154 chr3R 21569819 intergenic InR - chr3R 21569896 intergenic InR - chr3R 21569973 intergenic InR - chr3R_12_21565001 chr3R_21565001 RAL-837 2314 chr3R 21652528 21652569 chr3R 21652628 21652653 14 96 1.5 0.5 1.0 7.0 125 chr3R 21652528 intron E2f - chr3R 21652590 intron E2f - chr3R 21652653 intron E2f - chr3R_14_21650001 chr3R_21650001 RAL-837 2315 chr3R 21725672 21725685 chr3R 21725823 21725841 4 155 0.0 9.5 4.8 0.7 169 chr3R 21725672 intergenic not near genes chr3R 21725756 intergenic not near genes chr3R 21725841 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-837 2316 chr3R 21761116 21761125 chr3R 21768523 21768537 mdg1 4 7411 8.0 6.5 7.2 0.5 7421 chr3R 21761116 exon CG42335 + chr3R 21764826 intron CG42335 + chr3R 21768537 exon CG42335 + chr3R_4_21760001 chr3R_21760001 RAL-837 2317 chr3R 21761129 21761151 chr3R 21768511 21768528 mdg1 10 7398 1.5 3.0 2.2 3.1 7399 chr3R 21761129 exon CG42335 + chr3R 21764828 intron CG42335 + chr3R 21768528 exon CG42335 + chr3R_10_21760001 chr3R_21760001 RAL-837 2318 chr3R 21883950 21883989 chr3R 21884048 21884087 4 95 0.5 5.0 2.8 1.1 137 chr3R 21883950 intron,3` UTR,3` UTR CR45046 -,CG31465 +,fit - chr3R 21884018 intron,3` UTR CR45046 -,fit - chr3R 21884087 3` UTR,exon CR45046 -,fit - chr3R_4_21880001 chr3R_21880001 RAL-837 2319 chr3R 21907534 21907534 chr3R 28831801 28831802 20 6924268 18.5 15.5 17.0 1.1 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_20_25365001 chr3R_25365001 RAL-837 2320 chr3R 21907535 21907535 chr3R 28831801 28831802 26 6924266 19.5 15.5 17.5 1.4 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_26_25365001 chr3R_25365001 RAL-837 2321 chr3R 21907536 21907536 chr3R 28831801 28831802 30 6924266 20.0 15.5 17.8 1.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_30_25365001 chr3R_25365001 RAL-837 2322 chr3R 21985225 21985259 chr3R 21985350 21985374 7 124 3.5 3.0 3.2 1.7 149 chr3R 21985225 intron Eip93F + chr3R 21985300 intron Eip93F + chr3R 21985374 intron Eip93F + chr3R_7_21985001 chr3R_21985001 RAL-837 2323 chr3R 21989097 21989106 chr3R 21989241 21989250 4 143 6.5 0.0 3.2 1.0 153 chr3R 21989097 intron Eip93F + chr3R 21989174 intron Eip93F + chr3R 21989250 intron Eip93F + chr3R_4_21985001 chr3R_21985001 RAL-837 2324 chr3R 22055566 22055581 chr3R 22055760 22055779 4 202 3.5 2.5 3.0 1.0 213 chr3R 22055566 intron how + chr3R 22055672 intron how + chr3R 22055779 intron how + chr3R_4_22055001 chr3R_22055001 RAL-837 2325 chr3R 22069806 22069857 chr3R 22069921 22069972 14 108 2.5 4.0 3.2 3.3 166 chr3R 22069806 intron how + chr3R 22069889 intron how + chr3R 22069972 intron how + chr3R_14_22065001 chr3R_22065001 RAL-837 2326 chr3R 22084607 22084621 chr3R 22084706 22084730 7 105 3.5 11.0 7.2 0.9 123 chr3R 22084607 intergenic not near genes chr3R 22084668 intergenic not near genes chr3R 22084730 intergenic not near genes chr3R_7_22080001 chr3R_22080001 RAL-837 2327 chr3R 22117397 22117448 chr3R 22117490 22117534 15 93 5.5 3.0 4.2 2.9 137 chr3R 22117397 intergenic Ir94b -,Ir94c - chr3R 22117466 intergenic Ir94c -,Ir94b - chr3R 22117534 intergenic Ir94c -,Ir94b - chr3R_15_22115001 chr3R_22115001 RAL-837 2328 chr3R 22200888 22200936 chr3R 22200991 22201039 19 98 4.5 3.5 4.0 3.8 151 chr3R 22200888 intron,intron SKIP +,CR45224 - chr3R 22200964 intron,intron SKIP +,CR45224 - chr3R 22201039 intron,intron SKIP +,CR45224 - chr3R_19_22200001 chr3R_22200001 RAL-837 2329 chr3R 22234666 22234689 chr3R 22236005 22236028 pogo 5 1339 9.5 4.5 7.0 0.6 1362 chr3R 22234666 intron SKIP + chr3R 22235347 intron SKIP + chr3R 22236028 intron SKIP + chr3R_5_22235001 chr3R_22235001 RAL-837 2330 chr3R 22234692 22234706 chr3R 22236001 22236009 pogo 8 1323 7.0 4.5 5.8 1.2 1317 chr3R 22234692 intron SKIP + chr3R 22235350 intron SKIP + chr3R 22236009 intron SKIP + chr3R_8_22235001 chr3R_22235001 RAL-837 2331 chr3R 22239481 22239524 chr3R 22248555 22248604 roo 12 9075 2.0 3.0 2.5 3.4 9123 chr3R 22239481 intron SKIP + chr3R 22244042 intron SKIP + chr3R 22248604 intron SKIP + chr3R_12_22240001 chr3R_22240001 RAL-837 2332 chr3R 22428577 22428596 chr3R 22428667 22428692 7 91 2.5 4.5 3.5 1.6 115 chr3R 22428577 intron CG13847 - chr3R 22428634 intron CG13847 - chr3R 22428692 intron CG13847 - chr3R_7_22425001 chr3R_22425001 RAL-837 2333 chr3R 22433073 22433096 chr3R 22433193 22433206 4 116 8.5 9.5 9.0 0.4 133 chr3R 22433073 intron CG13847 - chr3R 22433140 intron CG13847 - chr3R 22433206 intron CG13847 - chr3R_4_22430001 chr3R_22430001 RAL-837 2334 chr3R 22450532 22450569 chr3R 22453191 22453223 NOF 9 2657 4.0 6.5 5.2 1.5 2691 chr3R 22450532 intron CG34376 + chr3R 22451878 intron CG34376 + chr3R 22453223 intron CG34376 + chr3R_9_22450001 chr3R_22450001 RAL-837 2335 chr3R 22507771 22507814 chr3R 22507875 22507918 12 104 1.0 4.0 2.5 3.4 147 chr3R 22507771 intron Octbeta1R + chr3R 22507844 intron Octbeta1R + chr3R 22507918 intron Octbeta1R + chr3R_12_22505001 chr3R_22505001 RAL-837 2336 chr3R 22542611 22542658 chr3R 22542756 22542803 16 144 3.5 2.0 2.8 4.2 192 chr3R 22542611 intergenic not near genes chr3R 22542707 intergenic not near genes chr3R 22542803 intergenic CR45647 + chr3R_16_22540001 chr3R_22540001 RAL-837 2337 chr3R 22591644 22591697 chr3R 22591744 22591797 12 98 2.0 5.0 3.5 2.7 153 chr3R 22591644 intron Efa6 + chr3R 22591720 intron Efa6 + chr3R 22591797 intron Efa6 + chr3R_12_22590001 chr3R_22590001 RAL-837 2338 chr3R 22657685 22657696 chr3R 22657783 22657794 5 98 2.5 3.0 2.8 1.3 109 chr3R 22657685 intron wake + chr3R 22657740 intron wake + chr3R 22657794 intron wake + chr3R_5_22655001 chr3R_22655001 RAL-837 2339 chr3R 22661285 22661320 chr3R 22661371 22661393 8 94 3.0 3.5 3.2 1.9 108 chr3R 22661285 intron wake + chr3R 22661339 intron wake + chr3R 22661393 intron wake + chr3R_8_22660001 chr3R_22660001 RAL-837 2340 chr3R 22667387 22667433 chr3R 22667599 22667645 14 209 4.0 1.5 2.8 3.7 258 chr3R 22667387 intron wake + chr3R 22667516 intron wake + chr3R 22667645 intron wake + chr3R_14_22665001 chr3R_22665001 RAL-837 2341 chr3R 22673690 22673729 chr3R 22673801 22673844 14 114 4.0 4.0 4.0 2.8 154 chr3R 22673690 intron wake + chr3R 22673767 intron wake + chr3R 22673844 intron wake + chr3R_14_22670001 chr3R_22670001 RAL-837 2342 chr3R 22797748 22797935 chr3R 22797847 22798050 15 104 0.0 0.0 0.0 15.0 302 chr3R 22797748 intergenic not near genes chr3R 22797899 intergenic not near genes chr3R 22798050 intergenic not near genes chr3R_15_22795001 chr3R_22795001 RAL-837 2343 chr3R 22860150 22860166 chr3R 22860262 22860265 4 107 4.5 4.5 4.5 0.7 115 chr3R 22860150 intergenic not near genes chr3R 22860208 intergenic not near genes chr3R 22860265 intergenic not near genes chr3R_4_22860001 chr3R_22860001 RAL-837 2344 chr3R 22881190 22881199 chr3R 22884908 22884912 Doc 6 3722 5.0 1.5 3.2 1.4 3722 chr3R 22881190 intergenic not near genes chr3R 22883051 intergenic not near genes chr3R 22884912 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-837 2345 chr3R 22888996 22889040 chr3R 22889091 22889116 6 93 3.0 2.0 2.5 1.7 120 chr3R 22888996 intergenic not near genes chr3R 22889056 intergenic not near genes chr3R 22889116 intergenic not near genes chr3R_6_22885001 chr3R_22885001 RAL-837 2346 chr3R 22899341 22899377 chr3R 22899433 22899474 8 95 1.5 3.0 2.2 2.5 133 chr3R 22899341 5` UTR klg + chr3R 22899408 5` UTR klg + chr3R 22899474 5` UTR klg + chr3R_8_22895001 chr3R_22895001 RAL-837 2347 chr3R 22917973 22917981 chr3R 22918099 22918107 4 126 6.0 7.5 6.8 0.5 134 chr3R 22917973 intron klg + chr3R 22918040 intron klg + chr3R 22918107 intron klg + chr3R_4_22915001 chr3R_22915001 RAL-837 2348 chr3R 22927688 22927728 chr3R 22927792 22927808 16 100 4.0 3.5 3.8 3.3 120 chr3R 22927688 intron klg + chr3R 22927748 intron klg + chr3R 22927808 intron klg + chr3R_16_22925001 chr3R_22925001 RAL-837 2349 chr3R 22974297 22974305 chr3R 22974375 22974393 5 95 0.0 3.0 1.5 2.0 96 chr3R 22974297 intergenic not near genes chr3R 22974345 intergenic not near genes chr3R 22974393 intergenic not near genes chr3R_5_22970001 chr3R_22970001 RAL-837 2350 chr3R 23064159 23064200 chr3R 23064288 23064329 8 123 3.0 4.0 3.5 1.8 170 chr3R 23064159 exon CG17111 - chr3R 23064244 intron CG17111 - chr3R 23064329 exon CG17111 - chr3R_8_23060001 chr3R_23060001 RAL-837 2351 chr3R 23064865 23064902 chr3R 23064976 23065009 12 109 0.0 7.0 3.5 2.7 144 chr3R 23064865 intron CG17111 - chr3R 23064937 intron CG17111 - chr3R 23065009 intron CG17111 - chr3R_12_23060001 chr3R_23060001 RAL-837 2352 chr3R 23101366 23101402 chr3R 23101472 23101514 7 107 2.5 2.0 2.2 2.2 148 chr3R 23101366 intron CG13830 - chr3R 23101440 intron CG13830 - chr3R 23101514 intron CG13830 - chr3R_7_23100001 chr3R_23100001 RAL-837 2353 chr3R 23176752 23176799 chr3R 23177240 23177287 12 482 5.0 4.0 4.5 2.2 535 chr3R 23176752 intron Irk1 + chr3R 23177020 intron Irk1 + chr3R 23177287 intron Irk1 + chr3R_12_23175001 chr3R_23175001 RAL-837 2354 chr3R 23214220 23214245 chr3R 23214325 23214346 5 103 12.5 5.0 8.8 0.5 126 chr3R 23214220 intron cnc - chr3R 23214283 intron cnc - chr3R 23214346 intron cnc - chr3R_5_23210001 chr3R_23210001 RAL-837 2355 chr3R 23245975 23245996 chr3R 23246077 23246078 4 96 5.5 3.5 4.5 0.7 103 chr3R 23245975 intron CG4467 - chr3R 23246026 intron CG4467 - chr3R 23246078 intron CG4467 - chr3R_4_23245001 chr3R_23245001 RAL-837 2356 chr3R 23245997 23246025 chr3R 23246074 23246097 6 75 1.5 3.0 2.2 1.9 100 chr3R 23245997 intron CG4467 - chr3R 23246047 intron CG4467 - chr3R 23246097 intron CG4467 - chr3R_6_23245001 chr3R_23245001 RAL-837 2357 chr3R 23346863 23346873 chr3R 23346961 23346968 6 98 2.0 6.5 4.2 1.2 105 chr3R 23346863 intergenic not near genes chr3R 23346916 intergenic not near genes chr3R 23346968 intergenic not near genes chr3R_6_23345001 chr3R_23345001 RAL-837 2358 chr3R 23401499 23401527 chr3R 23401656 23401692 12 164 3.0 2.5 2.8 3.2 193 chr3R 23401499 intergenic not near genes chr3R 23401596 intergenic not near genes chr3R 23401692 intergenic not near genes chr3R_12_23400001 chr3R_23400001 RAL-837 2359 chr3R 23401528 23401538 chr3R 23401653 23401656 4 121 3.0 2.0 2.5 1.1 128 chr3R 23401528 intergenic not near genes chr3R 23401592 intergenic not near genes chr3R 23401656 intergenic not near genes chr3R_4_23400001 chr3R_23400001 RAL-837 2360 chr3R 23451416 23451423 chr3R 23451595 23451627 6 192 3.5 2.0 2.8 1.6 211 chr3R 23451416 intron CG4374 - chr3R 23451522 intron CG4374 - chr3R 23451627 intron CG4374 - chr3R_6_23450001 chr3R_23450001 RAL-837 2361 chr3R 23455863 23455912 chr3R 23456347 23456396 8 480 4.0 4.0 4.0 1.6 533 chr3R 23455863 intron CG4374 - chr3R 23456130 intron CG4374 - chr3R 23456396 intron CG4374 - chr3R_8_23455001 chr3R_23455001 RAL-837 2362 chr3R 23548089 23548101 chr3R 23548374 23548393 5 308 3.0 3.0 3.0 1.2 304 chr3R 23548089 intergenic not near genes chr3R 23548241 intergenic not near genes chr3R 23548393 intergenic not near genes chr3R_5_23545001 chr3R_23545001 RAL-837 2363 chr3R 23558380 23558420 chr3R 23560179 23560204 Bari1 13 1796 2.5 3.0 2.8 3.4 1824 chr3R 23558380 intron beat-IV + chr3R 23559292 intron beat-IV + chr3R 23560204 intron beat-IV + chr3R_13_23555001 chr3R_23555001 RAL-837 2364 chr3R 23582776 23582826 chr3R 23582882 23582916 10 93 2.5 1.5 2.0 3.3 140 chr3R 23582776 intergenic not near genes chr3R 23582846 intergenic not near genes chr3R 23582916 intergenic not near genes chr3R_10_23580001 chr3R_23580001 RAL-837 2365 chr3R 23589279 23589330 chr3R 23592687 23592738 17 3413 40.5 42.5 41.5 0.4 3459 chr3R 23589279 exon CG10182 - chr3R 23591008 exon CG33337 - chr3R 23592738 exon CG33337 - chr3R_17_23590001 chr3R_23590001 RAL-837 2366 chr3R 23629803 23629828 chr3R 23629902 23629927 11 97 9.0 5.5 7.2 1.3 124 chr3R 23629803 intron CG31145 - chr3R 23629865 intron CG31145 - chr3R 23629927 intron CG31145 - chr3R_11_23625001 chr3R_23625001 RAL-837 2367 chr3R 23660580 23660609 chr3R 23661145 23661148 6 559 4.0 6.5 5.2 1.0 568 chr3R 23660580 intron CG31145 - chr3R 23660864 intron CG31145 - chr3R 23661148 intron CG31145 - chr3R_6_23660001 chr3R_23660001 RAL-837 2368 chr3R 23684695 23684727 chr3R 23685182 23685203 roo 4 492 4.5 4.5 4.5 0.7 508 chr3R 23684695 exon CG18754 + chr3R 23684949 intron CG18754 + chr3R 23685203 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-837 2369 chr3R 23835394 23835436 chr3R 23844556 23844601 roo 14 9166 4.0 4.0 4.0 2.8 9207 chr3R 23835394 intron CG34355 + chr3R 23839998 intron CG34355 + chr3R 23844601 intron CG34355 + chr3R_14_23835001 chr3R_23835001 RAL-837 2370 chr3R 23851070 23851087 chr3R 23858757 23858774 opus 6 7686 3.5 12.0 7.8 0.7 7704 chr3R 23851070 3` UTR CG34355 + chr3R 23854922 intergenic not near genes chr3R 23858774 intergenic not near genes chr3R_6_23850001 chr3R_23850001 RAL-837 2371 chr3R 23944895 23944932 chr3R 23945000 23945036 9 105 5.5 4.0 4.8 1.6 141 chr3R 23944895 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945036 exon CG12268 - chr3R_9_23940001 chr3R_23940001 RAL-837 2372 chr3R 23949041 23949058 chr3R 23949128 23949155 8 94 7.0 5.5 6.2 1.1 114 chr3R 23949041 intergenic not near genes chr3R 23949098 intergenic not near genes chr3R 23949155 intergenic not near genes chr3R_8_23945001 chr3R_23945001 RAL-837 2373 chr3R 24011649 24011674 chr3R 24011752 24011777 4 103 0.5 4.5 2.5 1.1 128 chr3R 24011649 intron KrT95D - chr3R 24011713 intron KrT95D - chr3R 24011777 intron KrT95D - chr3R_4_24010001 chr3R_24010001 RAL-837 2374 chr3R 24014762 24014808 chr3R 24014867 24014913 11 99 4.0 5.0 4.5 2.0 151 chr3R 24014762 intron KrT95D - chr3R 24014838 intron KrT95D - chr3R 24014913 intron KrT95D - chr3R_11_24010001 chr3R_24010001 RAL-837 2375 chr3R 24072074 24072087 chr3R 24072532 24072545 jockey 4 457 11.5 7.5 9.5 0.4 471 chr3R 24072074 intron 4EHP - chr3R 24072310 intron 4EHP - chr3R 24072545 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-837 2376 chr3R 24072095 24072115 chr3R 24072528 24072573 jockey 5 453 8.0 7.0 7.5 0.6 478 chr3R 24072095 intron 4EHP - chr3R 24072334 intron 4EHP - chr3R 24072573 intron 4EHP - chr3R_5_24070001 chr3R_24070001 RAL-837 2377 chr3R 24076914 24076949 chr3R 24078381 24078401 hobo 5 1472 4.0 3.5 3.8 1.0 1487 chr3R 24076914 intron 4EHP - chr3R 24077658 intron 4EHP - chr3R 24078401 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-837 2378 chr3R 24100440 24100483 chr3R 24100555 24100579 6 110 3.5 4.0 3.8 1.2 139 chr3R 24100440 intron 4EHP - chr3R 24100510 intron 4EHP - chr3R 24100579 intron 4EHP - chr3R_6_24100001 chr3R_24100001 RAL-837 2379 chr3R 24204753 24204797 chr3R 24204856 24204880 6 99 4.5 3.0 3.8 1.2 127 chr3R 24204753 intron twin - chr3R 24204816 intron twin - chr3R 24204880 intron twin - chr3R_6_24200001 chr3R_24200001 RAL-837 2380 chr3R 24207207 24207244 chr3R 24212303 24212312 flea 4 5089 5.5 10.0 7.8 0.5 5105 chr3R 24207207 intron twin - chr3R 24209760 intron twin - chr3R 24212312 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-837 2381 chr3R 24377763 24377800 chr3R 24377905 24377906 7 135 3.0 0.0 1.5 2.8 143 chr3R 24377763 intergenic CG33342 + chr3R 24377834 intergenic CG33342 + chr3R 24377906 intergenic CG33342 + chr3R_7_24375001 chr3R_24375001 RAL-837 2382 chr3R 24426267 24426297 chr3R 24426544 24426555 4 271 5.0 4.0 4.5 0.7 288 chr3R 24426267 intron nAChRalpha1 - chr3R 24426411 intron nAChRalpha1 - chr3R 24426555 intron nAChRalpha1 - chr3R_4_24425001 chr3R_24425001 RAL-837 2383 chr3R 24426298 24426310 chr3R 24426541 24426587 5 265 3.0 4.0 3.5 1.1 289 chr3R 24426298 intron nAChRalpha1 - chr3R 24426442 intron nAChRalpha1 - chr3R 24426587 intron nAChRalpha1 - chr3R_5_24425001 chr3R_24425001 RAL-837 2384 chr3R 24431579 24431621 chr3R 24431678 24431720 10 95 4.0 0.0 2.0 3.3 141 chr3R 24431579 intron nAChRalpha1 - chr3R 24431650 intron nAChRalpha1 - chr3R 24431720 intron nAChRalpha1 - chr3R_10_24430001 chr3R_24430001 RAL-837 2385 chr3R 24434242 24434271 chr3R 24434320 24434369 7 91 5.0 2.5 3.8 1.5 127 chr3R 24434242 intron nAChRalpha1 - chr3R 24434306 intron nAChRalpha1 - chr3R 24434369 intron nAChRalpha1 - chr3R_7_24430001 chr3R_24430001 RAL-837 2386 chr3R 24527785 24527835 chr3R 24527896 24527946 10 107 2.0 2.5 2.2 3.1 161 chr3R 24527785 intergenic CG13618 +,CG6607 + chr3R 24527866 intergenic CG6607 +,CG13618 + chr3R 24527946 intergenic CG6607 +,CG13618 + chr3R_10_24525001 chr3R_24525001 RAL-837 2387 chr3R 24624366 24624379 chr3R 24624468 24624488 4 107 1.5 4.0 2.8 1.1 122 chr3R 24624366 intron Syx18 - chr3R 24624427 intron Syx18 - chr3R 24624488 exon Syx18 - chr3R_4_24620001 chr3R_24620001 RAL-837 2388 chr3R 24667585 24667626 chr3R 24667682 24667723 11 89 3.5 0.0 1.8 3.9 138 chr3R 24667585 intron slo + chr3R 24667654 intron slo + chr3R 24667723 intron slo + chr3R_11_24665001 chr3R_24665001 RAL-837 2389 chr3R 24670165 24670193 chr3R 24670269 24670288 6 101 2.0 2.0 2.0 2.0 123 chr3R 24670165 intron slo + chr3R 24670226 intron slo + chr3R 24670288 intron slo + chr3R_6_24670001 chr3R_24670001 RAL-837 2390 chr3R 24741098 24741112 chr3R 24741202 24741232 4 114 5.5 2.5 4.0 0.8 134 chr3R 24741098 intron tok + chr3R 24741165 intron tok + chr3R 24741232 intron tok + chr3R_4_24740001 chr3R_24740001 RAL-837 2391 chr3R 24927113 24927128 chr3R 24931924 24931939 Doc 5 4810 8.5 2.5 5.5 0.8 4826 chr3R 24927113 intergenic Trf4-2 + chr3R 24929526 intergenic not near genes chr3R 24931939 intergenic CG11771 + chr3R_5_24925001 chr3R_24925001 RAL-837 2392 chr3R 24927136 24927144 chr3R 24931915 24931947 Doc 4 4801 4.5 1.5 3.0 1.0 4811 chr3R 24927136 intergenic Trf4-2 + chr3R 24929542 intergenic not near genes chr3R 24931947 intergenic CG11771 + chr3R_4_24925001 chr3R_24925001 RAL-837 2393 chr3R 24973936 24973986 chr3R 24974032 24974047 10 86 2.5 4.0 3.2 2.4 111 chr3R 24973936 intergenic not near genes chr3R 24973992 intergenic not near genes chr3R 24974047 intergenic not near genes chr3R_10_24970001 chr3R_24970001 RAL-837 2394 chr3R 25004900 25004917 chr3R 25004990 25005020 8 101 0.0 6.0 3.0 2.0 120 chr3R 25004900 intron tnc + chr3R 25004960 intron tnc + chr3R 25005020 intron tnc + chr3R_8_25000001 chr3R_25000001 RAL-837 2395 chr3R 25126025 25126054 chr3R 25126639 25126662 4 610 19.0 15.0 17.0 0.2 637 chr3R 25126025 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126344 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126662 3` UTR,exon CG42503 -,Mocs2 - chr3R_4_25125001 chr3R_25125001 RAL-837 2396 chr3R 25136380 25136431 chr3R 25136480 25136506 13 94 3.5 3.5 3.5 2.9 126 chr3R 25136380 3` UTR Bili + chr3R 25136443 3` UTR Bili + chr3R 25136506 3` UTR Bili + chr3R_13_25135001 chr3R_25135001 RAL-837 2397 chr3R 25188196 25188243 chr3R 25188293 25188340 7 89 3.0 6.5 4.8 1.2 144 chr3R 25188196 intron,intron lobo -,dan + chr3R 25188268 intron,intron lobo -,dan + chr3R 25188340 intron,intron lobo -,dan + chr3R_7_25185001 chr3R_25185001 RAL-837 2398 chr3R 25192787 25192808 chr3R 25192938 25192960 5 152 4.0 4.0 4.0 1.0 173 chr3R 25192787 intron,3` UTR lobo -,dan + chr3R 25192874 intron lobo - chr3R 25192960 intron lobo - chr3R_5_25190001 chr3R_25190001 RAL-837 2399 chr3R 25236181 25236214 chr3R 25236322 25236336 5 139 3.0 3.5 3.2 1.2 155 chr3R 25236181 intergenic not near genes chr3R 25236258 intergenic not near genes chr3R 25236336 intergenic not near genes chr3R_5_25235001 chr3R_25235001 RAL-837 2400 chr3R 25239210 25239242 chr3R 25239336 25239373 12 129 4.5 4.5 4.5 2.2 163 chr3R 25239210 intergenic CG11852 + chr3R 25239292 intergenic CG11852 + chr3R 25239373 intergenic CG11852 + chr3R_12_25235001 chr3R_25235001 RAL-837 2401 chr3R 25302663 25302706 chr3R 25302932 25302975 15 262 5.0 5.0 5.0 2.5 312 chr3R 25302663 exon CG31370 + chr3R 25302819 exon CG31370 + chr3R 25302975 exon CG31370 + chr3R_15_25300001 chr3R_25300001 RAL-837 2402 chr3R 25374820 25374868 chr3R 25374918 25374965 11 93 2.0 4.0 3.0 2.8 145 chr3R 25374820 intron Fur1 - chr3R 25374892 intron Fur1 - chr3R 25374965 intron Fur1 - chr3R_11_25370001 chr3R_25370001 RAL-837 2403 chr3R 25422042 25422071 chr3R 25422143 25422172 7 101 5.5 0.0 2.8 1.8 130 chr3R 25422042 intron Fur1 - chr3R 25422107 intron Fur1 - chr3R 25422172 intron Fur1 - chr3R_7_25420001 chr3R_25420001 RAL-837 2404 chr3R 25431409 25431447 chr3R 25431515 25431553 8 106 0.5 1.0 0.8 4.4 144 chr3R 25431409 intron Fur1 - chr3R 25431481 intron Fur1 - chr3R 25431553 intron Fur1 - chr3R_8_25430001 chr3R_25430001 RAL-837 2405 chr3R 25520969 25520981 chr3R 25521088 25521100 6 118 9.0 9.5 9.2 0.6 131 chr3R 25520969 intron msi + chr3R 25521034 intron msi + chr3R 25521100 intron msi + chr3R_6_25520001 chr3R_25520001 RAL-837 2406 chr3R 25612895 25612920 chr3R 25612992 25613017 7 95 8.0 3.5 5.8 1.0 122 chr3R 25612895 intron Npl4 - chr3R 25612956 intron Npl4 - chr3R 25613017 intron Npl4 - chr3R_7_25610001 chr3R_25610001 RAL-837 2407 chr3R 25612929 25612942 chr3R 25612988 25613029 7 80 5.0 3.0 4.0 1.4 100 chr3R 25612929 intron Npl4 - chr3R 25612979 intron Npl4 - chr3R 25613029 intron Npl4 - chr3R_7_25610001 chr3R_25610001 RAL-837 2408 chr3R 25637162 25637208 chr3R 25637485 25637541 24 323 5.5 3.0 4.2 4.6 379 chr3R 25637162 intergenic not near genes chr3R 25637352 intergenic jigr1 + chr3R 25637541 intergenic jigr1 + chr3R_24_25635001 chr3R_25635001 RAL-837 2409 chr3R 25658743 25658789 chr3R 25658842 25658888 10 96 5.5 2.0 3.8 2.1 145 chr3R 25658743 intron Tnks - chr3R 25658816 intron Tnks - chr3R 25658888 intron Tnks - chr3R_10_25655001 chr3R_25655001 RAL-837 2410 chr3R 25725809 25725861 chr3R 25734989 25735012 roo 7 9175 1.5 5.0 3.2 1.7 9203 chr3R 25725809 intron LpR2 - chr3R 25730410 intron LpR2 - chr3R 25735012 intron LpR2 - chr3R_7_25730001 chr3R_25730001 RAL-837 2411 chr3R 25738618 25738630 chr3R 25738721 25738738 4 107 10.0 2.5 6.2 0.6 120 chr3R 25738618 intron LpR2 - chr3R 25738678 intron LpR2 - chr3R 25738738 intron LpR2 - chr3R_4_25735001 chr3R_25735001 RAL-837 2412 chr3R 25738631 25738659 chr3R 25738718 25738767 14 96 5.5 2.5 4.0 2.8 136 chr3R 25738631 intron LpR2 - chr3R 25738699 intron LpR2 - chr3R 25738767 intron LpR2 - chr3R_14_25735001 chr3R_25735001 RAL-837 2413 chr3R 25832678 25832721 chr3R 25841880 25841923 roo 7 9196 2.5 4.5 3.5 1.6 9245 chr3R 25832678 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841923 exon alpha4GT2 + chr3R_7_25835001 chr3R_25835001 RAL-837 2414 chr3R 25843622 25843666 chr3R 25843771 25843816 9 149 2.0 5.5 3.8 1.9 194 chr3R 25843622 intergenic CR45653 + chr3R 25843719 intergenic CR45653 + chr3R 25843816 intergenic CR45653 + chr3R_9_25840001 chr3R_25840001 RAL-837 2415 chr3R 25933252 25933273 chr3R 25933557 25933569 8 313 1.5 4.5 3.0 2.0 317 chr3R 25933252 intron CCAP-R - chr3R 25933410 intron CCAP-R - chr3R 25933569 intron CCAP-R - chr3R_8_25930001 chr3R_25930001 RAL-837 2416 chr3R 26122447 26122476 chr3R 26122543 26122571 9 91 5.0 6.5 5.8 1.3 124 chr3R 26122447 intron CG31324 + chr3R 26122509 intron CG31324 + chr3R 26122571 intron CG31324 + chr3R_9_26120001 chr3R_26120001 RAL-837 2417 chr3R 26126534 26126564 chr3R 26126640 26126670 7 106 6.0 5.0 5.5 1.1 136 chr3R 26126534 intron CG31324 + chr3R 26126602 intron CG31324 + chr3R 26126670 intron,5` UTR CG31324 +,CG14556 + chr3R_7_26125001 chr3R_26125001 RAL-837 2418 chr3R 26158345 26158385 chr3R 26158557 26158598 8 211 5.0 1.5 3.2 1.9 253 chr3R 26158345 intergenic not near genes chr3R 26158472 intergenic not near genes chr3R 26158598 intergenic not near genes chr3R_8_26155001 chr3R_26155001 RAL-837 2419 chr3R 26166166 26166205 chr3R 26166272 26166311 6 101 4.0 5.0 4.5 1.1 145 chr3R 26166166 intergenic not near genes chr3R 26166238 intergenic not near genes chr3R 26166311 intergenic not near genes chr3R_6_26165001 chr3R_26165001 RAL-837 2420 chr3R 26239807 26239858 chr3R 26240138 26240183 17 328 3.5 4.5 4.0 3.4 376 chr3R 26239807 intron CR42745 + chr3R 26239995 intron CR42745 + chr3R 26240183 intron CR42745 + chr3R_17_26235001 chr3R_26235001 RAL-837 2421 chr3R 26265801 26265847 chr3R 26265909 26265931 18 101 2.5 4.5 3.5 4.0 130 chr3R 26265801 intron CG6154 + chr3R 26265866 intron CG6154 + chr3R 26265931 intron CG6154 + chr3R_18_26265001 chr3R_26265001 RAL-837 2422 chr3R 26284213 26284253 chr3R 26284342 26284380 8 128 1.0 2.5 1.8 2.9 167 chr3R 26284213 intergenic not near genes chr3R 26284296 intergenic not near genes chr3R 26284380 intergenic not near genes chr3R_8_26280001 chr3R_26280001 RAL-837 2423 chr3R 26287384 26287424 chr3R 26287492 26287532 7 108 5.5 8.5 7.0 0.9 148 chr3R 26287384 intergenic not near genes chr3R 26287458 intergenic not near genes chr3R 26287532 intergenic not near genes chr3R_7_26285001 chr3R_26285001 RAL-837 2424 chr3R 26312515 26312562 chr3R 26312802 26312855 11 303 29.0 29.0 29.0 0.4 340 chr3R 26312515 intergenic not near genes chr3R 26312685 intergenic not near genes chr3R 26312855 intergenic not near genes chr3R_11_26310001 chr3R_26310001 RAL-837 2425 chr3R 26320331 26320373 chr3R 26320537 26320580 9 203 1.5 3.5 2.5 2.6 249 chr3R 26320331 intron CG33970 + chr3R 26320456 intron CG33970 + chr3R 26320580 intron CG33970 + chr3R_9_26320001 chr3R_26320001 RAL-837 2426 chr3R 26373092 26373121 chr3R 26373268 26373297 5 173 4.5 5.0 4.8 0.9 205 chr3R 26373092 intergenic not near genes chr3R 26373194 intergenic not near genes chr3R 26373297 intergenic not near genes chr3R_5_26370001 chr3R_26370001 RAL-837 2427 chr3R 26376315 26376356 chr3R 26385487 26385508 roo 10 9170 7.5 1.0 4.2 1.9 9193 chr3R 26376315 intergenic not near genes chr3R 26380912 intergenic not near genes chr3R 26385508 intergenic not near genes chr3R_10_26380001 chr3R_26380001 RAL-837 2428 chr3R 26413271 26413289 chr3R 26413365 26413406 6 109 4.5 5.5 5.0 1.0 135 chr3R 26413271 intergenic not near genes chr3R 26413338 intergenic not near genes chr3R 26413406 intergenic not near genes chr3R_6_26410001 chr3R_26410001 RAL-837 2429 chr3R 26510512 26510517 chr3R 26519587 26519592 roo 4 9075 7.5 4.0 5.8 0.6 9080 chr3R 26510512 intron plum - chr3R 26515052 intron plum - chr3R 26519592 intron,5` UTR plum -,CR45226 + chr3R_4_26515001 chr3R_26515001 RAL-837 2430 chr3R 26510518 26510535 chr3R 26519586 26519610 roo 11 9071 5.5 3.0 4.2 2.1 9092 chr3R 26510518 intron plum - chr3R 26515064 intron plum - chr3R 26519610 intron,5` UTR plum -,CR45226 + chr3R_11_26515001 chr3R_26515001 RAL-837 2431 chr3R 26540984 26541027 chr3R 26541082 26541121 9 97 0.5 1.5 1.0 4.5 137 chr3R 26540984 intron scrib + chr3R 26541052 intron scrib + chr3R 26541121 intron scrib + chr3R_9_26540001 chr3R_26540001 RAL-837 2432 chr3R 26542031 26542074 chr3R 26542142 26542185 11 105 3.0 1.5 2.2 3.4 154 chr3R 26542031 intron scrib + chr3R 26542108 intron scrib + chr3R 26542185 intron scrib + chr3R_11_26540001 chr3R_26540001 RAL-837 2433 chr3R 26558304 26558354 chr3R 26565637 26565686 Stalker4 5 7323 4.0 3.5 3.8 1.0 7382 chr3R 26558304 intron scrib + chr3R 26561995 intron scrib + chr3R 26565686 intron scrib + chr3R_5_26560001 chr3R_26560001 RAL-837 2434 chr3R 26641625 26641659 chr3R 26641732 26641766 10 107 5.5 5.0 5.2 1.6 141 chr3R 26641625 intergenic not near genes chr3R 26641696 intergenic not near genes chr3R 26641766 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-837 2435 chr3R 26642718 26642759 chr3R 26643126 26643150 jockey 7 410 7.5 4.5 6.0 1.0 432 chr3R 26642718 intergenic not near genes chr3R 26642934 intergenic not near genes chr3R 26643150 intergenic not near genes chr3R_7_26640001 chr3R_26640001 RAL-837 2436 chr3R 26651509 26651547 chr3R 26651614 26651652 8 98 1.5 7.5 4.5 1.5 143 chr3R 26651509 intron beat-VII - chr3R 26651580 intron beat-VII - chr3R 26651652 intron beat-VII - chr3R_8_26650001 chr3R_26650001 RAL-837 2437 chr3R 26660633 26660643 chr3R 26660736 26660741 5 102 9.0 1.5 5.2 0.8 108 chr3R 26660633 intron beat-VII - chr3R 26660687 intron beat-VII - chr3R 26660741 intron beat-VII - chr3R_5_26660001 chr3R_26660001 RAL-837 2438 chr3R 26660650 26660670 chr3R 26660734 26660766 4 97 5.5 1.5 3.5 0.9 116 chr3R 26660650 intron beat-VII - chr3R 26660708 intron beat-VII - chr3R 26660766 intron beat-VII - chr3R_4_26660001 chr3R_26660001 RAL-837 2439 chr3R 26740272 26740320 chr3R 26740368 26740416 9 92 0.0 3.0 1.5 3.6 144 chr3R 26740272 intergenic not near genes chr3R 26740344 intergenic not near genes chr3R 26740416 intergenic not near genes chr3R_9_26740001 chr3R_26740001 RAL-837 2440 chr3R 26810537 26810568 chr3R 26811037 26811073 roo 8 503 4.5 5.5 5.0 1.3 536 chr3R 26810537 intron Tl + chr3R 26810805 intron Tl + chr3R 26811073 intron Tl + chr3R_8_26810001 chr3R_26810001 RAL-837 2441 chr3R 26981066 26981114 chr3R 26981171 26981219 8 102 4.0 0.0 2.0 2.7 153 chr3R 26981066 intron CG14253 + chr3R 26981142 intron CG14253 + chr3R 26981219 intron CG14253 + chr3R_8_26980001 chr3R_26980001 RAL-837 2442 chr3R 27007391 27007431 chr3R 27016540 27016556 roo 8 9140 5.5 3.0 4.2 1.5 9165 chr3R 27007391 intron RYa-R + chr3R 27011974 intron RYa-R + chr3R 27016556 intron RYa-R + chr3R_8_27010001 chr3R_27010001 RAL-837 2443 chr3R 27028702 27028750 chr3R 27028801 27028849 14 94 2.0 0.5 1.2 6.4 147 chr3R 27028702 intron RYa-R + chr3R 27028776 intron RYa-R + chr3R 27028849 intron RYa-R + chr3R_14_27025001 chr3R_27025001 RAL-837 2444 chr3R 27051641 27051693 chr3R 27051752 27051767 15 106 3.5 0.0 1.8 5.4 126 chr3R 27051641 intron RYa-R + chr3R 27051704 intron RYa-R + chr3R 27051767 intron RYa-R + chr3R_15_27050001 chr3R_27050001 RAL-837 2445 chr3R 27092693 27092735 chr3R 27092892 27092919 7 190 2.0 1.0 1.5 2.8 226 chr3R 27092693 intergenic CG14258 + chr3R 27092806 intergenic CG14258 + chr3R 27092919 intergenic CG14258 + chr3R_7_27090001 chr3R_27090001 RAL-837 2446 chr3R 27140493 27140546 chr3R 27148123 27148156 412 18 7619 6.0 5.0 5.5 2.8 7663 chr3R 27140493 intron CG6051 - chr3R 27144324 intron CG6051 - chr3R 27148156 intron CG6051 - chr3R_18_27140001 chr3R_27140001 RAL-837 2447 chr3R 27206595 27206639 chr3R 27206782 27206784 9 177 4.5 4.0 4.2 1.7 189 chr3R 27206595 intergenic not near genes chr3R 27206690 intergenic not near genes chr3R 27206784 intergenic not near genes chr3R_9_27205001 chr3R_27205001 RAL-837 2448 chr3R 27315972 27316009 chr3R 27316068 27316105 13 95 5.5 1.5 3.5 2.9 133 chr3R 27315972 intron CG3339 - chr3R 27316038 intron CG3339 - chr3R 27316105 exon CG3339 - chr3R_13_27315001 chr3R_27315001 RAL-837 2449 chr3R 27335953 27335960 chr3R 27336034 27336046 4 87 0.5 0.0 0.2 3.3 93 chr3R 27335953 intergenic not near genes chr3R 27336000 intergenic not near genes chr3R 27336046 intergenic not near genes chr3R_4_27335001 chr3R_27335001 RAL-837 2450 chr3R 27342776 27342779 chr3R 27351377 27351380 Tirant 4 8601 6.0 2.5 4.2 0.8 8604 chr3R 27342776 intron CG42534 + chr3R 27347078 intron CG42534 + chr3R 27351380 intron CG42534 + chr3R_4_27345001 chr3R_27345001 RAL-837 2451 chr3R 27342785 27342804 chr3R 27351376 27351405 Tirant 7 8600 2.0 2.5 2.2 2.2 8620 chr3R 27342785 intron CG42534 + chr3R 27347095 intron CG42534 + chr3R 27351405 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-837 2452 chr3R 27452576 27452603 chr3R 27452776 27452803 7 199 5.0 8.5 6.8 0.9 227 chr3R 27452576 intergenic not near genes chr3R 27452690 intergenic not near genes chr3R 27452803 intergenic not near genes chr3R_7_27450001 chr3R_27450001 RAL-837 2453 chr3R 27470033 27470061 chr3R 27470705 27470718 7 670 5.0 1.5 3.2 1.7 685 chr3R 27470033 intergenic not near genes chr3R 27470376 intergenic not near genes chr3R 27470718 intergenic not near genes chr3R_7_27470001 chr3R_27470001 RAL-837 2454 chr3R 27492360 27492404 chr3R 27492467 27492511 10 102 6.5 1.5 4.0 2.0 151 chr3R 27492360 intergenic not near genes chr3R 27492436 intergenic not near genes chr3R 27492511 intergenic not near genes chr3R_10_27490001 chr3R_27490001 RAL-837 2455 chr3R 27496589 27496597 chr3R 27496702 27496722 4 122 7.5 4.5 6.0 0.6 133 chr3R 27496589 intergenic not near genes chr3R 27496656 intergenic not near genes chr3R 27496722 intergenic not near genes chr3R_4_27495001 chr3R_27495001 RAL-837 2456 chr3R 27541932 27541959 chr3R 27542033 27542060 9 100 6.5 3.0 4.8 1.6 128 chr3R 27541932 intergenic not near genes chr3R 27541996 intergenic Gr98b + chr3R 27542060 intergenic Gr98b + chr3R_9_27540001 chr3R_27540001 RAL-837 2457 chr3R 27619681 27619730 chr3R 27619816 27619826 7 129 2.0 1.0 1.5 2.8 145 chr3R 27619681 intron Tusp + chr3R 27619754 intron Tusp + chr3R 27619826 intron Tusp + chr3R_7_27615001 chr3R_27615001 RAL-837 2458 chr3R 27644229 27644284 chr3R 27644341 27644396 11 112 1.5 2.5 2.0 3.7 167 chr3R 27644229 intron tau - chr3R 27644312 intron tau - chr3R 27644396 intron tau - chr3R_11_27640001 chr3R_27640001 RAL-837 2459 chr3R 27679928 27679970 chr3R 27680071 27680095 9 138 3.0 5.5 4.2 1.7 167 chr3R 27679928 exon CG12883 + chr3R 27680012 3` UTR CG12883 + chr3R 27680095 3` UTR CG12883 + chr3R_9_27680001 chr3R_27680001 RAL-837 2460 chr3R 27705344 27705386 chr3R 27705444 27705486 7 97 1.5 2.0 1.8 2.5 142 chr3R 27705344 exon CG12428 - chr3R 27705415 intron CG12428 - chr3R 27705486 exon CG12428 - chr3R_7_27705001 chr3R_27705001 RAL-837 2461 chr3R 27725554 27725587 chr3R 27731016 27731049 I-element 9 5462 3.5 4.5 4.0 1.8 5495 chr3R 27725554 intergenic not near genes chr3R 27728302 intergenic not near genes chr3R 27731049 intergenic not near genes chr3R_9_27725001 chr3R_27725001 RAL-837 2462 chr3R 27731178 27731229 chr3R 27731279 27731309 6 98 3.0 4.5 3.8 1.2 131 chr3R 27731178 intergenic not near genes chr3R 27731244 intergenic not near genes chr3R 27731309 intergenic not near genes chr3R_6_27730001 chr3R_27730001 RAL-837 2463 chr3R 27747969 27748018 chr3R 27748067 27748111 9 96 2.0 2.5 2.2 2.8 142 chr3R 27747969 3` UTR Ets98B + chr3R 27748040 3` UTR Ets98B + chr3R 27748111 3` UTR Ets98B + chr3R_9_27745001 chr3R_27745001 RAL-837 2464 chr3R 27779257 27779284 chr3R 27779354 27779361 6 94 3.5 4.0 3.8 1.2 104 chr3R 27779257 exon CG34353 - chr3R 27779309 intron CG34353 - chr3R 27779361 intron CG34353 - chr3R_6_27775001 chr3R_27775001 RAL-837 2465 chr3R 27799924 27799964 chr3R 27800026 27800062 11 99 4.5 8.5 6.5 1.5 138 chr3R 27799924 intron CG34353 - chr3R 27799993 intron CG34353 - chr3R 27800062 intron CG34353 - chr3R_11_27795001 chr3R_27795001 RAL-837 2466 chr3R 27856754 27856789 chr3R 27858246 27858274 hopper2 9 1499 3.0 6.0 4.5 1.6 1520 chr3R 27856754 intron CG34353 - chr3R 27857514 intron CG34353 - chr3R 27858274 intron CG34353 - chr3R_9_27855001 chr3R_27855001 RAL-837 2467 chr3R 27862954 27862983 chr3R 27868268 27868308 Transpac 5 5316 0.5 4.5 2.5 1.4 5354 chr3R 27862954 intron CG34353 - chr3R 27865631 intron CG34353 - chr3R 27868308 intron CG34353 - chr3R_5_27865001 chr3R_27865001 RAL-837 2468 chr3R 27875700 27875729 chr3R 27882757 27882789 297 11 7066 3.0 3.0 3.0 2.8 7089 chr3R 27875700 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882789 intron CG34353 - chr3R_11_27875001 chr3R_27875001 RAL-837 2469 chr3R 27911234 27911259 chr3R 27911332 27911357 8 97 3.5 6.5 5.0 1.3 123 chr3R 27911234 intergenic not near genes chr3R 27911296 intergenic not near genes chr3R 27911357 intergenic not near genes chr3R_8_27910001 chr3R_27910001 RAL-837 2470 chr3R 28012963 28012978 chr3R 28013169 28013183 6 216 1.0 6.0 3.5 1.3 220 chr3R 28012963 intergenic not near genes chr3R 28013073 intergenic not near genes chr3R 28013183 intergenic not near genes chr3R_6_28010001 chr3R_28010001 RAL-837 2471 chr3R 28035469 28035515 chr3R 28035566 28035612 5 97 2.0 2.0 2.0 1.7 143 chr3R 28035469 intron CG34362 + chr3R 28035540 intron CG34362 + chr3R 28035612 intron CG34362 + chr3R_5_28035001 chr3R_28035001 RAL-837 2472 chr3R 28054435 28054464 chr3R 28054531 28054560 9 96 4.5 5.0 4.8 1.6 125 chr3R 28054435 intron CG34362 + chr3R 28054498 intron CG34362 + chr3R 28054560 intron CG34362 + chr3R_9_28050001 chr3R_28050001 RAL-837 2473 chr3R 28068475 28068522 chr3R 28073937 28073984 I-element 6 5462 1.5 1.0 1.2 2.7 5509 chr3R 28068475 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073984 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-837 2474 chr3R 28097659 28097663 chr3R 28097786 28097790 4 127 7.0 3.0 5.0 0.7 131 chr3R 28097659 intergenic not near genes chr3R 28097724 intergenic not near genes chr3R 28097790 intergenic not near genes chr3R_4_28095001 chr3R_28095001 RAL-837 2475 chr3R 28103327 28103359 chr3R 28103420 28103431 6 101 1.5 3.0 2.2 1.9 104 chr3R 28103327 intergenic not near genes chr3R 28103379 intergenic not near genes chr3R 28103431 intergenic not near genes chr3R_6_28100001 chr3R_28100001 RAL-837 2476 chr3R 28173654 28173699 chr3R 28181104 28181149 mdg1 8 7448 6.5 7.0 6.8 1.0 7495 chr3R 28173654 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181149 intron CG34354 + chr3R_8_28175001 chr3R_28175001 RAL-837 2477 chr3R 28253326 28253370 chr3R 28255856 28255863 jockey 10 2518 2.0 4.0 3.0 2.5 2537 chr3R 28253326 intergenic not near genes chr3R 28254594 intergenic not near genes chr3R 28255863 intergenic not near genes chr3R_10_28250001 chr3R_28250001 RAL-837 2478 chr3R 28269116 28269170 chr3R 28269321 28269360 10 193 2.0 3.0 2.5 2.9 244 chr3R 28269116 intergenic not near genes chr3R 28269238 intergenic not near genes chr3R 28269360 intergenic not near genes chr3R_10_28265001 chr3R_28265001 RAL-837 2479 chr3R 28331502 28331523 chr3R 28331596 28331622 7 97 2.0 4.5 3.2 1.7 120 chr3R 28331502 intron larp - chr3R 28331562 intron larp - chr3R 28331622 intron larp - chr3R_7_28330001 chr3R_28330001 RAL-837 2480 chr3R 28393696 28393730 chr3R 28393798 28393850 9 116 1.5 3.0 2.2 2.8 154 chr3R 28393696 intergenic not near genes chr3R 28393773 intergenic not near genes chr3R 28393850 intergenic not near genes chr3R_9_28390001 chr3R_28390001 RAL-837 2481 chr3R 28406560 28406614 chr3R 28406857 28406885 16 294 2.5 3.0 2.8 4.2 325 chr3R 28406560 intergenic not near genes chr3R 28406722 intergenic not near genes chr3R 28406885 intergenic not near genes chr3R_16_28405001 chr3R_28405001 RAL-837 2482 chr3R 28416107 28416123 chr3R 28416239 28416260 4 136 7.5 2.5 5.0 0.7 153 chr3R 28416107 intergenic not near genes chr3R 28416184 intergenic not near genes chr3R 28416260 intergenic not near genes chr3R_4_28415001 chr3R_28415001 RAL-837 2483 chr3R 28484353 28484395 chr3R 28486250 28486292 65 1901 113.0 133.0 123.0 0.5 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_65_28485001 chr3R_28485001 RAL-837 2484 chr3R 28546942 28546979 chr3R 28547068 28547085 12 118 4.5 2.0 3.2 2.9 143 chr3R 28546942 intergenic not near genes chr3R 28547014 intergenic not near genes chr3R 28547085 intergenic not near genes chr3R_12_28545001 chr3R_28545001 RAL-837 2485 chr3R 28599802 28599853 chr3R 28599923 28599972 16 116 3.5 4.0 3.8 3.3 170 chr3R 28599802 intergenic not near genes chr3R 28599887 intergenic not near genes chr3R 28599972 intergenic Hrb98DE + chr3R_16_28595001 chr3R_28595001 RAL-837 2486 chr3R 28626173 28626223 chr3R 28626293 28626303 15 107 2.0 2.0 2.0 5.0 130 chr3R 28626173 intron CG10011 - chr3R 28626238 intron CG10011 - chr3R 28626303 intron CG10011 - chr3R_15_28625001 chr3R_28625001 RAL-837 2487 chr3R 28736884 28736907 chr3R 28737092 28737137 8 222 2.5 2.0 2.2 2.5 253 chr3R 28736884 intergenic AstA-R2 - chr3R 28737010 intergenic AstA-R2 - chr3R 28737137 3` UTR AstA-R2 - chr3R_8_28735001 chr3R_28735001 RAL-837 2488 chr3R 28758272 28758281 chr3R 28763903 28763918 roo 4 5636 10.5 0.0 5.2 0.6 5646 chr3R 28758272 intergenic aqrs - chr3R 28761095 intergenic not near genes chr3R 28763918 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-837 2489 chr3R 28758310 28758318 chr3R 28771332 28771345 Stalker4 6 13026 3.0 0.5 1.8 2.1 13035 chr3R 28758310 intergenic aqrs - chr3R 28764828 intergenic not near genes chr3R 28771345 intergenic not near genes chr3R_6_28760001 chr3R_28760001 RAL-837 2490 chr3R 28811580 28811600 chr3R 28811726 28811766 7 162 2.0 3.5 2.8 1.8 186 chr3R 28811580 intergenic wdn - chr3R 28811673 intergenic wdn -,CG1646 + chr3R 28811766 intergenic CG1646 +,wdn - chr3R_7_28810001 chr3R_28810001 RAL-837 2491 chr3R 21907534 21907536 chr3R 28831801 28831802 34 6924266 20.0 15.5 17.8 1.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_34_25365001 chr3R_25365001 RAL-837 2492 chr3R 28985048 28985086 chr3R 28985170 28985210 8 123 1.5 1.0 1.2 3.6 162 chr3R 28985048 intergenic not near genes chr3R 28985129 intergenic not near genes chr3R 28985210 intergenic not near genes chr3R_8_28985001 chr3R_28985001 RAL-837 2493 chr3R 29047324 29047363 chr3R 29047423 29047452 8 95 2.5 5.0 3.8 1.7 128 chr3R 29047324 3` UTR Pkc98E + chr3R 29047388 3` UTR Pkc98E + chr3R 29047452 3` UTR Pkc98E + chr3R_8_29045001 chr3R_29045001 RAL-837 2494 chr3R 29070040 29070067 chr3R 29070141 29070168 8 101 4.5 7.0 5.8 1.2 128 chr3R 29070040 intron CG11873 + chr3R 29070104 intron CG11873 + chr3R 29070168 intron CG11873 + chr3R_8_29070001 chr3R_29070001 RAL-837 2495 chr3R 29070068 29070078 chr3R 29070137 29070179 12 88 2.0 5.5 3.8 2.5 111 chr3R 29070068 intron CG11873 + chr3R 29070124 intron CG11873 + chr3R 29070179 intron CG11873 + chr3R_12_29070001 chr3R_29070001 RAL-837 2496 chr3R 29079388 29079409 chr3R 29080774 29080799 NOF 6 1385 0.0 4.0 2.0 2.0 1411 chr3R 29079388 intron CG11873 + chr3R 29080094 intron CG11873 + chr3R 29080799 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RAL-837 2497 chr3R 29151925 29151960 chr3R 29152037 29152072 5 110 0.0 4.0 2.0 1.7 147 chr3R 29151925 intergenic ligatin -,Slbp - chr3R 29151998 intergenic Slbp -,ligatin - chr3R 29152072 intergenic Slbp -,ligatin - chr3R_5_29150001 chr3R_29150001 RAL-837 2498 chr3R 29176114 29176120 chr3R 29176223 29176229 4 109 1.0 7.0 4.0 0.8 115 chr3R 29176114 intron CG14509 - chr3R 29176172 intron CG14509 - chr3R 29176229 intron CG14509 - chr3R_4_29175001 chr3R_29175001 RAL-837 2499 chr3R 29213042 29213063 chr3R 29213145 29213166 7 103 8.0 4.0 6.0 1.0 124 chr3R 29213042 intergenic not near genes chr3R 29213104 intergenic not near genes chr3R 29213166 intergenic not near genes chr3R_7_29210001 chr3R_29210001 RAL-837 2500 chr3R 29213065 29213093 chr3R 29213143 29213166 10 93 4.5 3.0 3.8 2.1 101 chr3R 29213065 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213166 intergenic not near genes chr3R_10_29210001 chr3R_29210001 RAL-837 2501 chr3R 29237241 29237268 chr3R 29239282 29239298 5 2039 21.0 6.0 13.5 0.3 2057 chr3R 29237241 exon CG11951 - chr3R 29238270 intron CG11951 - chr3R 29239298 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-837 2502 chr3R 29238763 29238783 chr3R 29238897 29238899 7 129 3.5 7.5 5.5 1.1 136 chr3R 29238763 intergenic CG11951 -,CG31427 - chr3R 29238831 3` UTR CG31427 - chr3R 29238899 3` UTR CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-837 2503 chr3R 29237528 29237535 chr3R 29239416 29239423 4 1888 15.5 8.5 12.0 0.3 1895 chr3R 29237528 exon CG11951 - chr3R 29238476 intron CG11951 - chr3R 29239423 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-837 2504 chr3R 29240452 29240487 chr3R 29240555 29240591 7 104 3.5 2.0 2.8 1.8 139 chr3R 29240452 intergenic CG31427 -,CG31445 - chr3R 29240522 intergenic CG31445 -,CG31427 - chr3R 29240591 3` UTR CG31445 - chr3R_7_29240001 chr3R_29240001 RAL-837 2505 chr3R 29256245 29256295 chr3R 29256345 29256395 12 98 2.0 2.0 2.0 4.0 150 chr3R 29256245 intergenic CG45544 +,stg - chr3R 29256320 intergenic CG45544 + chr3R 29256395 intergenic CG45544 + chr3R_12_29255001 chr3R_29255001 RAL-837 2506 chr3R 29274293 29274335 chr3R 29274394 29274401 9 93 2.0 2.5 2.2 2.8 108 chr3R 29274293 intergenic not near genes chr3R 29274347 intergenic not near genes chr3R 29274401 intergenic not near genes chr3R_9_29270001 chr3R_29270001 RAL-837 2507 chr3R 29281688 29281737 chr3R 29281788 29281838 10 93 1.5 1.5 1.5 4.0 150 chr3R 29281688 intergenic not near genes chr3R 29281763 intergenic not near genes chr3R 29281838 intergenic not near genes chr3R_10_29280001 chr3R_29280001 RAL-837 2508 chr3R 29319808 29319853 chr3R 29320147 29320192 jockey 11 339 4.0 4.0 4.0 2.2 384 chr3R 29319808 intergenic Cnx99A - chr3R 29320000 intergenic Cnx99A - chr3R 29320192 intergenic not near genes chr3R_11_29320001 chr3R_29320001 RAL-837 2509 chr3R 29335381 29335414 chr3R 29335529 29335576 9 155 4.5 4.0 4.2 1.7 195 chr3R 29335381 intergenic not near genes chr3R 29335478 intergenic not near genes chr3R 29335576 intergenic not near genes chr3R_9_29335001 chr3R_29335001 RAL-837 2510 chr3R 29346573 29346615 chr3R 29346700 29346707 10 123 3.0 5.5 4.2 1.9 134 chr3R 29346573 intergenic not near genes chr3R 29346640 intergenic not near genes chr3R 29346707 intergenic not near genes chr3R_10_29345001 chr3R_29345001 RAL-837 2511 chr3R 29351734 29351752 chr3R 29351839 29351843 6 103 2.5 6.0 4.2 1.2 109 chr3R 29351734 intergenic not near genes chr3R 29351788 intergenic not near genes chr3R 29351843 intergenic not near genes chr3R_6_29350001 chr3R_29350001 RAL-837 2512 chr3R 29355936 29355991 chr3R 29356035 29356089 10 93 2.5 2.0 2.2 3.1 153 chr3R 29355936 intergenic CR45547 - chr3R 29356012 intergenic CR45547 - chr3R 29356089 intergenic CR45547 - chr3R_10_29355001 chr3R_29355001 RAL-837 2513 chr3R 29449344 29449386 chr3R 29449435 29449449 11 87 1.5 2.5 2.0 3.7 105 chr3R 29449344 intron Ptp99A + chr3R 29449396 intron Ptp99A + chr3R 29449449 intron Ptp99A + chr3R_11_29445001 chr3R_29445001 RAL-837 2514 chr3R 29471988 29472040 chr3R 29472101 29472153 14 112 2.0 5.0 3.5 3.1 165 chr3R 29471988 intron Ptp99A + chr3R 29472070 intron Ptp99A + chr3R 29472153 intron Ptp99A + chr3R_14_29470001 chr3R_29470001 RAL-837 2515 chr3R 29474443 29474456 chr3R 29474518 29474563 5 90 3.5 2.0 2.8 1.3 120 chr3R 29474443 intron Ptp99A + chr3R 29474503 intron Ptp99A + chr3R 29474563 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-837 2516 chr3R 29498628 29498675 chr3R 29498724 29498771 8 95 2.0 2.0 2.0 2.7 143 chr3R 29498628 exon CG2010 + chr3R 29498700 3` UTR CG2010 + chr3R 29498771 3` UTR CG2010 + chr3R_8_29495001 chr3R_29495001 RAL-837 2517 chr3R 29505873 29505917 chr3R 29505970 29506014 9 95 3.0 4.5 3.8 1.9 141 chr3R 29505873 intergenic not near genes chr3R 29505944 intergenic not near genes chr3R 29506014 intergenic not near genes chr3R_9_29505001 chr3R_29505001 RAL-837 2518 chr3R 29576752 29577008 chr3R 29576873 29577109 4 111 2.0 0.5 1.2 1.8 357 chr3R 29576752 intergenic not near genes chr3R 29576930 intergenic not near genes chr3R 29577109 intergenic not near genes chr3R_4_29575001 chr3R_29575001 RAL-837 2519 chr3R 29581532 29581558 chr3R 29581633 29581659 8 100 2.0 0.5 1.2 3.6 127 chr3R 29581532 intergenic not near genes chr3R 29581596 intergenic not near genes chr3R 29581659 intergenic not near genes chr3R_8_29580001 chr3R_29580001 RAL-837 2520 chr3R 29738242 29738297 chr3R 29739729 29739781 hobo 11 1481 5.0 2.0 3.5 2.4 1539 chr3R 29738242 intergenic CG1969 +,CG7598 + chr3R 29739012 intron CG1969 + chr3R 29739781 5` UTR CG1969 + chr3R_11_29735001 chr3R_29735001 RAL-837 2521 chr3R 29854839 29854853 chr3R 29854915 29854953 5 95 4.0 3.5 3.8 1.0 114 chr3R 29854839 3` UTR dgt1 - chr3R 29854896 exon dgt1 - chr3R 29854953 exon dgt1 - chr3R_5_29850001 chr3R_29850001 RAL-837 2522 chr3R 29880591 29880611 chr3R 29880666 29880680 7 89 4.0 4.0 4.0 1.4 89 chr3R 29880591 intron CG31038 + chr3R 29880636 intron CG31038 + chr3R 29880680 intron CG31038 + chr3R_7_29880001 chr3R_29880001 RAL-837 2523 chr3R 29882007 29882034 chr3R 29891184 29891211 roo 7 9177 4.5 3.5 4.0 1.4 9204 chr3R 29882007 intron CG31038 + chr3R 29886609 intron CG31038 + chr3R 29891211 intron CG31038 + chr3R_7_29885001 chr3R_29885001 RAL-837 2524 chr3R 29882038 29882049 chr3R 29891183 29891211 roo 6 9164 3.0 3.5 3.2 1.4 9173 chr3R 29882038 intron CG31038 + chr3R 29886624 intron CG31038 + chr3R 29891211 intron CG31038 + chr3R_6_29885001 chr3R_29885001 RAL-837 2525 chr3R 29966337 29966375 chr3R 29966623 29966668 12 290 6.0 6.0 6.0 1.7 331 chr3R 29966337 intron TkR99D - chr3R 29966502 intron TkR99D - chr3R 29966668 intron TkR99D - chr3R_12_29965001 chr3R_29965001 RAL-837 2526 chr3R 29975713 29975729 chr3R 29975790 29975831 5 97 1.5 4.5 3.0 1.2 118 chr3R 29975713 intergenic not near genes chr3R 29975772 intergenic not near genes chr3R 29975831 intergenic not near genes chr3R_5_29975001 chr3R_29975001 RAL-837 2527 chr3R 30013669 30013707 chr3R 30013764 30013810 10 94 1.5 4.0 2.8 2.6 141 chr3R 30013669 intron CG7920 - chr3R 30013740 intron CG7920 - chr3R 30013810 intron CG7920 - chr3R_10_30010001 chr3R_30010001 RAL-837 2528 chr3R 30084845 30084882 chr3R 30086317 30086359 hobo 10 1476 2.5 6.0 4.2 1.9 1514 chr3R 30084845 intron sima + chr3R 30085602 intron sima + chr3R 30086359 intron sima + chr3R_10_30085001 chr3R_30085001 RAL-837 2529 chr3R 30097472 30097661 chr3R 30097572 30097804 19 141 3.5 3.5 3.5 4.2 332 chr3R 30097472 intron sima + chr3R 30097638 intron sima + chr3R 30097804 intron sima + chr3R_19_30095001 chr3R_30095001 RAL-837 2530 chr3R 30156857 30156879 chr3R 30156952 30156978 5 98 6.0 1.5 3.8 1.0 121 chr3R 30156857 intron CG11498 - chr3R 30156918 intron CG11498 - chr3R 30156978 intron CG11498 - chr3R_5_30155001 chr3R_30155001 RAL-837 2531 chr3R 30181339 30181366 chr3R 30181444 30181481 6 105 3.5 0.0 1.8 2.1 142 chr3R 30181339 3` UTR Bet5 + chr3R 30181410 3` UTR Bet5 + chr3R 30181481 3` UTR Bet5 + chr3R_6_30180001 chr3R_30180001 RAL-837 2532 chr3R 30184226 30184263 chr3R 30184350 30184397 11 128 2.0 4.0 3.0 2.8 171 chr3R 30184226 3` UTR CR44262 - chr3R 30184312 3` UTR CR44262 - chr3R 30184397 3` UTR CR44262 - chr3R_11_30180001 chr3R_30180001 RAL-837 2533 chr3R 30246308 30246333 chr3R 30246407 30246432 8 98 0.5 2.0 1.2 3.6 124 chr3R 30246308 intron CG9733 - chr3R 30246370 intron CG9733 - chr3R 30246432 intron CG9733 - chr3R_8_30245001 chr3R_30245001 RAL-837 2534 chr3R 30260357 30260394 chr3R 30260453 30260490 10 95 1.5 4.0 2.8 2.6 133 chr3R 30260357 intergenic not near genes chr3R 30260424 intergenic not near genes chr3R 30260490 intergenic not near genes chr3R_10_30260001 chr3R_30260001 RAL-837 2535 chr3R 30268397 30268446 chr3R 30268495 30268507 10 87 5.0 2.5 3.8 2.1 110 chr3R 30268397 intergenic not near genes chr3R 30268452 intergenic not near genes chr3R 30268507 intergenic not near genes chr3R_10_30265001 chr3R_30265001 RAL-837 2536 chr3R 30317344 30317359 chr3R 30324926 30324971 roo 5 7596 0.0 2.0 1.0 2.5 7627 chr3R 30317344 intron hdc + chr3R 30321158 intron hdc + chr3R 30324971 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-837 2537 chr3R 30375522 30375570 chr3R 30383163 30383201 412 17 7642 2.5 4.0 3.2 4.0 7679 chr3R 30375522 intergenic not near genes chr3R 30379362 intergenic not near genes chr3R 30383201 intergenic not near genes chr3R_17_30375001 chr3R_30375001 RAL-837 2538 chr3R 30396196 30396248 chr3R 30404482 30404501 roo 13 8282 4.5 5.5 5.0 2.2 8305 chr3R 30396196 intergenic not near genes chr3R 30400348 intergenic not near genes chr3R 30404501 5` UTR CR45570 + chr3R_13_30400001 chr3R_30400001 RAL-837 2539 chr3R 30554380 30554425 chr3R 30554476 30554521 4 96 2.5 2.5 2.5 1.1 141 chr3R 30554380 intron tmod + chr3R 30554450 intron tmod + chr3R 30554521 intron tmod + chr3R_4_30550001 chr3R_30550001 RAL-837 2540 chr3R 30627601 30627629 chr3R 30627696 30627698 8 89 3.5 6.0 4.8 1.4 97 chr3R 30627601 3` UTR CG2267 - chr3R 30627650 exon CG2267 - chr3R 30627698 exon CG2267 - chr3R_8_30625001 chr3R_30625001 RAL-837 2541 chr3R 30679514 30679536 chr3R 30686988 30687015 blood 5 7484 5.5 3.0 4.2 1.0 7501 chr3R 30679514 intergenic not near genes chr3R 30683264 intergenic not near genes chr3R 30687015 intergenic not near genes chr3R_5_30680001 chr3R_30680001 RAL-837 2542 chr3R 30690154 30690191 chr3R 30690258 30690289 6 97 4.5 7.5 6.0 0.9 135 chr3R 30690154 intergenic Spn100A + chr3R 30690222 intergenic Spn100A + chr3R 30690289 intergenic Spn100A + chr3R_6_30690001 chr3R_30690001 RAL-837 2543 chr3R 30700845 30700875 chr3R 30700988 30701018 7 140 3.0 0.5 1.8 2.5 173 chr3R 30700845 intergenic not near genes chr3R 30700932 intergenic not near genes chr3R 30701018 intergenic not near genes chr3R_7_30700001 chr3R_30700001 RAL-837 2544 chr3R 30737926 30737971 chr3R 30738042 30738086 8 114 4.5 2.0 3.2 1.9 160 chr3R 30737926 intergenic not near genes chr3R 30738006 intergenic not near genes chr3R 30738086 intergenic not near genes chr3R_8_30735001 chr3R_30735001 RAL-837 2545 chr3R 30818800 30818834 chr3R 30820384 30820413 1360 13 1582 8.5 7.0 7.8 1.5 1613 chr3R 30818800 intron cindr + chr3R 30819606 intron cindr + chr3R 30820413 intron cindr + chr3R_13_30815001 chr3R_30815001 RAL-837 2546 chr3R 30859387 30859427 chr3R 30859485 30859490 9 94 1.5 4.0 2.8 2.4 103 chr3R 30859387 intergenic not near genes chr3R 30859438 intergenic not near genes chr3R 30859490 intergenic not near genes chr3R_9_30855001 chr3R_30855001 RAL-837 2547 chr3R 30862410 30862450 chr3R 30862538 30862578 9 124 4.0 2.0 3.0 2.2 168 chr3R 30862410 intergenic not near genes chr3R 30862494 intergenic not near genes chr3R 30862578 intergenic not near genes chr3R_9_30860001 chr3R_30860001 RAL-837 2548 chr3R 30948077 30948106 chr3R 30948268 30948317 8 205 3.0 3.5 3.2 1.9 240 chr3R 30948077 intergenic not near genes chr3R 30948197 intergenic not near genes chr3R 30948317 intergenic not near genes chr3R_8_30945001 chr3R_30945001 RAL-837 2549 chr3R 30973120 30973158 chr3R 30973296 30973339 12 172 2.0 2.5 2.2 3.8 219 chr3R 30973120 intron 5-HT7 - chr3R 30973230 intron 5-HT7 - chr3R 30973339 intron 5-HT7 - chr3R_12_30970001 chr3R_30970001 RAL-837 2550 chr3R 31042090 31042134 chr3R 31042197 31042210 13 104 4.0 3.0 3.5 2.9 120 chr3R 31042090 intron CanA1 + chr3R 31042150 intron CanA1 + chr3R 31042210 intron CanA1 + chr3R_13_31040001 chr3R_31040001 RAL-837 2551 chr3R 31069626 31069676 chr3R 31069741 31069790 11 110 2.0 3.0 2.5 3.1 164 chr3R 31069626 intron Sox100B + chr3R 31069708 intron Sox100B + chr3R 31069790 intron Sox100B + chr3R_11_31065001 chr3R_31065001 RAL-837 2552 chr3R 31074217 31074250 chr3R 31081835 31081868 springer 9 7616 5.0 6.0 5.5 1.4 7651 chr3R 31074217 intron Sox100B + chr3R 31078042 intron Sox100B + chr3R 31081868 intron Sox100B + chr3R_9_31075001 chr3R_31075001 RAL-837 2553 chr3R 31087089 31087131 chr3R 31087616 31087650 10 525 2.0 5.5 3.8 2.1 561 chr3R 31087089 intergenic not near genes chr3R 31087370 intergenic not near genes chr3R 31087650 intergenic not near genes chr3R_10_31085001 chr3R_31085001 RAL-837 2554 chr3R 31137134 31137186 chr3R 31137234 31137286 10 87 2.0 3.0 2.5 2.9 152 chr3R 31137134 intron Gycbeta100B + chr3R 31137210 intron Gycbeta100B + chr3R 31137286 intron Gycbeta100B + chr3R_10_31135001 chr3R_31135001 RAL-837 2555 chr3R 31175748 31175786 chr3R 31175857 31175895 8 106 5.5 5.5 5.5 1.2 147 chr3R 31175748 intron Gycbeta100B + chr3R 31175822 intron Gycbeta100B + chr3R 31175895 intron Gycbeta100B + chr3R_8_31175001 chr3R_31175001 RAL-837 2556 chr3R 31194894 31194943 chr3R 31195005 31195032 9 110 2.0 5.5 3.8 1.9 138 chr3R 31194894 intron mesh - chr3R 31194963 intron mesh - chr3R 31195032 intron mesh - chr3R_9_31190001 chr3R_31190001 RAL-837 2557 chr3R 31279368 31279409 chr3R 31285562 31285604 diver 8 6201 4.5 3.5 4.0 1.6 6236 chr3R 31279368 intergenic not near genes chr3R 31282486 intergenic not near genes chr3R 31285604 intergenic not near genes chr3R_8_31280001 chr3R_31280001 RAL-837 2558 chr3R 31413073 31413119 chr3R 31418293 31418326 copia 11 5206 3.0 0.5 1.8 3.9 5253 chr3R 31413073 intron Gprk2 + chr3R 31415700 intron Gprk2 + chr3R 31418326 intron Gprk2 + chr3R_11_31415001 chr3R_31415001 RAL-837 2559 chr3R 31435349 31435535 chr3R 31435521 31435817 15 186 1.0 1.0 1.0 7.5 468 chr3R 31435349 intron Gprk2 + chr3R 31435583 intron Gprk2 + chr3R 31435817 intron Gprk2 + chr3R_15_31435001 chr3R_31435001 RAL-837 2560 chr3R 31516969 31517001 chr3R 31517110 31517134 7 154 2.5 5.0 3.8 1.5 165 chr3R 31516969 intergenic not near genes chr3R 31517052 intergenic not near genes chr3R 31517134 intergenic not near genes chr3R_7_31515001 chr3R_31515001 RAL-837 2561 chr3R 31530831 31530849 chr3R 31531149 31531175 7 330 3.0 4.0 3.5 1.6 344 chr3R 31530831 intergenic not near genes chr3R 31531003 intergenic not near genes chr3R 31531175 intergenic not near genes chr3R_7_31530001 chr3R_31530001 RAL-837 2562 chr3R 31538472 31538510 chr3R 31538570 31538597 10 94 4.5 4.0 4.2 1.9 125 chr3R 31538472 intergenic not near genes chr3R 31538534 intergenic not near genes chr3R 31538597 intergenic not near genes chr3R_10_31535001 chr3R_31535001 RAL-837 2563 chr3R 31610096 31610146 chr3R 31610202 31610252 12 105 3.5 3.5 3.5 2.7 156 chr3R 31610096 intron CycG - chr3R 31610174 intron CycG - chr3R 31610252 intron CycG - chr3R_12_31610001 chr3R_31610001 RAL-837 2564 chr3R 31649096 31649134 chr3R 31649316 31649354 9 219 6.0 2.5 4.2 1.7 258 chr3R 31649096 intron kek6 + chr3R 31649225 intron kek6 + chr3R 31649354 intron kek6 + chr3R_9_31645001 chr3R_31645001 RAL-837 2565 chr3R 31691517 31691539 chr3R 31696303 31696319 Doc 5 4785 7.0 4.5 5.8 0.7 4802 chr3R 31691517 intergenic not near genes chr3R 31693918 intergenic not near genes chr3R 31696319 intergenic not near genes chr3R_5_31690001 chr3R_31690001 RAL-837 2566 chr3R 31691540 31691561 chr3R 31696299 31696347 Doc 6 4777 5.5 4.5 5.0 1.0 4807 chr3R 31691540 intergenic not near genes chr3R 31693944 intergenic not near genes chr3R 31696347 intergenic not near genes chr3R_6_31690001 chr3R_31690001 RAL-837 2567 chr3R 31805108 31805129 chr3R 31805204 31805225 7 96 7.0 4.0 5.5 1.1 117 chr3R 31805108 5` UTR CG42233 - chr3R 31805166 5` UTR CG42233 - chr3R 31805225 5` UTR CG42233 - chr3R_7_31805001 chr3R_31805001 RAL-837 2568 chr3R 31805134 31805161 chr3R 31805202 31805252 11 87 5.0 4.0 4.5 2.0 118 chr3R 31805134 5` UTR CG42233 - chr3R 31805193 5` UTR CG42233 - chr3R 31805252 5` UTR CG42233 - chr3R_11_31805001 chr3R_31805001 RAL-837 2569 chr3R 31831520 31831568 chr3R 31831619 31831633 18 87 3.5 4.5 4.0 3.6 113 chr3R 31831520 intron RhoGAP100F + chr3R 31831576 intron RhoGAP100F + chr3R 31831633 intron RhoGAP100F + chr3R_18_31830001 chr3R_31830001 RAL-837 2570 chr3R 31878614 31878642 chr3R 31878733 31878761 4 115 3.0 2.5 2.8 1.1 147 chr3R 31878614 intron heph - chr3R 31878688 intron heph - chr3R 31878761 intron heph - chr3R_4_31875001 chr3R_31875001 RAL-837 2571 chr3R 31881274 31881296 chr3R 31881378 31881398 4 100 6.0 4.5 5.2 0.6 124 chr3R 31881274 intron heph - chr3R 31881336 intron heph - chr3R 31881398 intron heph - chr3R_4_31880001 chr3R_31880001 RAL-837 2572 chr3R 31911662 31911691 chr3R 31911768 31911797 5 99 5.0 4.5 4.8 0.9 135 chr3R 31911662 intron heph - chr3R 31911730 intron heph - chr3R 31911797 intron heph - chr3R_5_31910001 chr3R_31910001 RAL-837 2573 chr3R 31911692 31911711 chr3R 31911762 31911817 11 91 3.5 3.0 3.2 2.6 125 chr3R 31911692 intron heph - chr3R 31911754 intron heph - chr3R 31911817 intron heph - chr3R_11_31910001 chr3R_31910001 RAL-837 2574 chr3R 31931196 31931216 chr3R 31931277 31931314 7 95 4.0 7.0 5.5 1.1 118 chr3R 31931196 intron heph - chr3R 31931255 intron heph - chr3R 31931314 intron heph - chr3R_7_31930001 chr3R_31930001 RAL-837 2575 chr3R 31971397 31971435 chr3R 31971494 31971504 9 92 6.5 5.0 5.8 1.3 107 chr3R 31971397 intron heph - chr3R 31971450 intron heph - chr3R 31971504 intron heph - chr3R_9_31970001 chr3R_31970001 RAL-837 2576 chr3R 31991096 31991137 chr3R 31991193 31991236 9 99 1.0 2.5 1.8 3.2 140 chr3R 31991096 intron heph - chr3R 31991166 intron heph - chr3R 31991236 intron heph - chr3R_9_31990001 chr3R_31990001 RAL-837 2577 chr3R 31997894 31997925 chr3R 32005583 32005623 blood 12 7694 1.5 2.0 1.8 4.3 7729 chr3R 31997894 intron heph - chr3R 32001758 intron heph - chr3R 32005623 intron heph - chr3R_12_32000001 chr3R_32000001 RAL-837 2578 chr3R 32022302 32022357 chr3R 32022424 32022468 17 114 3.5 3.5 3.5 3.8 166 chr3R 32022302 5` UTR CR45557 + chr3R 32022385 5` UTR CR45557 + chr3R 32022468 5` UTR CR45557 + chr3R_17_32020001 chr3R_32020001 RAL-837 2579 chr3R 32045557 32045604 chr3R 32045653 32045669 11 97 4.5 4.0 4.2 2.1 112 chr3R 32045557 3` UTR krz - chr3R 32045613 3` UTR krz - chr3R 32045669 3` UTR krz - chr3R_11_32045001 chr3R_32045001 RAL-837 2580 chr4 280785 280807 chr4 281435 281457 5 648 8.5 4.5 6.5 0.7 672 chr4 280785 intron Syt7 - chr4 281121 intron Syt7 - chr4 281457 intron Syt7 - chr4_5_280001 chr4_280001 RAL-837 2581 chr4 314498 314534 chr4 314596 314630 11 95 1.5 2.5 2.0 3.7 132 chr4 314498 intergenic Zip102B -,CG32850 + chr4 314564 intergenic CG32850 +,Zip102B - chr4 314630 intergenic CG32850 + chr4_11_310001 chr4_310001 RAL-837 2582 chr4 319992 320016 chr4 328165 328196 Stalker2 4 8186 6.5 7.0 6.8 0.5 8204 chr4 319992 3` UTR CG32850 + chr4 324094 intron CG32850 + chr4 328196 3` UTR,3` UTR CG32850 +,PMCA - chr4_4_320001 chr4_320001 RAL-837 2583 chr4 671592 671608 chr4 680195 680211 Tirant 5 8603 5.5 11.0 8.2 0.5 8619 chr4 671592 intron CG11360 + chr4 675902 intron CG11360 + chr4 680211 intron CG11360 + chr4_5_675001 chr4_675001 RAL-837 2584 chr4 671614 671630 chr4 680186 680233 Tirant 6 8589 4.0 8.5 6.2 0.8 8619 chr4 671614 intron CG11360 + chr4 675924 intron CG11360 + chr4 680233 intron CG11360 + chr4_6_675001 chr4_675001 RAL-837 2585 chr4 947221 947275 chr4 947339 947393 20 116 7.5 2.5 5.0 3.3 172 chr4 947221 3` UTR mGluR + chr4 947307 3` UTR mGluR + chr4 947393 3` UTR mGluR + chr4_20_945001 chr4_945001 RAL-837 2586 chr4 959603 959651 chr4 959802 959837 14 189 3.5 4.5 4.0 2.8 234 chr4 959603 intergenic CR44030 +,CR45201 - chr4 959720 5` UTR CR44030 + chr4 959837 5` UTR CR44030 + chr4_14_955001 chr4_955001 RAL-837 2587 chr4 1026757 1026789 chr4 1026851 1026859 12 104 0.0 4.0 2.0 4.0 102 chr4 1026757 intron PlexA - chr4 1026808 5` UTR PlexA - chr4 1026859 5` UTR PlexA - chr4_12_1025001 chr4_1025001 RAL-837 2588 chrX 295845 295880 chrX 303485 303520 412 4 7640 4.0 3.0 3.5 0.9 7675 chrX 295845 intron CG3777 + chrX 299682 intron CG3777 + chrX 303520 intron CG3777 + chrX_4_295001 chrX_295001 RAL-837 2589 chrX 318451 318503 chrX 323557 323598 flea 16 5099 4.0 2.5 3.2 3.8 5147 chrX 318451 intron,intron CG3777 +,CG32816 - chrX 321024 intron,intron CG3777 +,CG32816 - chrX 323598 intron,intron CG3777 +,CG32816 - chrX_16_320001 chrX_320001 RAL-837 2590 chrX 325618 325645 chrX 325723 325750 8 103 2.0 2.0 2.0 2.7 132 chrX 325618 intron,intron CG3777 +,CG32816 - chrX 325684 intron,intron CG3777 +,CG32816 - chrX 325750 intron,intron CG3777 +,CG32816 - chrX_8_325001 chrX_325001 RAL-837 2591 chrX 428415 428450 chrX 434602 434655 3S18 13 6194 2.0 3.0 2.5 3.7 6240 chrX 428415 intron CG32816 - chrX 431535 intron CG32816 - chrX 434655 intron CG32816 - chrX_13_430001 chrX_430001 RAL-837 2592 chrX 440441 440460 chrX 440612 440667 7 196 2.5 3.0 2.8 1.8 226 chrX 440441 intron CG32816 - chrX 440554 intron CG32816 - chrX 440667 intron CG32816 - chrX_7_440001 chrX_440001 RAL-837 2593 chrX 440975 441022 chrX 441073 441120 9 93 1.5 1.5 1.5 3.6 145 chrX 440975 intron CG32816 - chrX 441048 intron CG32816 - chrX 441120 intron CG32816 - chrX_9_440001 chrX_440001 RAL-837 2594 chrX 450349 450389 chrX 450447 450487 9 98 4.0 1.5 2.8 2.4 138 chrX 450349 intron CG32816 - chrX 450418 intron CG32816 - chrX 450487 intron CG32816 - chrX_9_450001 chrX_450001 RAL-837 2595 chrX 494617 494635 chrX 494714 494726 11 105 2.0 5.5 3.8 2.3 109 chrX 494617 5` UTR CG17778 + chrX 494672 5` UTR CG17778 + chrX 494726 intron CG17778 + chrX_11_490001 chrX_490001 RAL-837 2596 chrX 547614 547658 chrX 547878 547922 9 260 2.5 4.0 3.2 2.1 308 chrX 547614 intron Appl + chrX 547768 intron Appl + chrX 547922 intron Appl + chrX_9_545001 chrX_545001 RAL-837 2597 chrX 667633 667670 chrX 667731 667774 16 99 3.0 1.5 2.2 5.0 141 chrX 667633 intergenic not near genes chrX 667704 intergenic not near genes chrX 667774 intergenic not near genes chrX_16_665001 chrX_665001 RAL-837 2598 chrX 670253 670294 chrX 670353 670388 7 99 0.0 3.0 1.5 2.8 135 chrX 670253 intergenic not near genes chrX 670320 intergenic not near genes chrX 670388 intergenic not near genes chrX_7_670001 chrX_670001 RAL-837 2599 chrX 680817 680871 chrX 680920 680974 10 100 3.5 4.0 3.8 2.1 157 chrX 680817 intergenic not near genes chrX 680896 intergenic not near genes chrX 680974 intergenic not near genes chrX_10_680001 chrX_680001 RAL-837 2600 chrX 706811 706822 chrX 707160 707161 5 361 0.0 3.0 1.5 2.0 350 chrX 706811 intron sdk + chrX 706986 intron sdk + chrX 707161 intron sdk + chrX_5_705001 chrX_705001 RAL-837 2601 chrX 802275 802316 chrX 802362 802413 5 95 2.5 3.5 3.0 1.2 138 chrX 802275 exon CG13359 - chrX 802344 exon CG13359 - chrX 802413 exon CG13359 - chrX_5_800001 chrX_800001 RAL-837 2602 chrX 812262 812293 chrX 817897 817944 297 8 5641 4.5 2.5 3.5 1.8 5682 chrX 812262 intron CG43867 - chrX 815103 intron CG43867 - chrX 817944 intron CG43867 - chrX_8_815001 chrX_815001 RAL-837 2603 chrX 827606 827631 chrX 835391 835443 roo 7 7801 6.5 0.0 3.2 1.7 7837 chrX 827606 intron CG43867 - chrX 831524 intron CG43867 - chrX 835443 intron CG43867 - chrX_7_830001 chrX_830001 RAL-837 2604 chrX 906689 906729 chrX 908498 908538 S-element 5 1803 2.5 5.5 4.0 1.0 1849 chrX 906689 intron CG43867 - chrX 907614 intron CG43867 - chrX 908538 intron CG43867 - chrX_5_905001 chrX_905001 RAL-837 2605 chrX 1063736 1063751 chrX 1072549 1072554 roo 5 8811 7.0 6.0 6.5 0.7 8818 chrX 1063736 intron CR44779 + chrX 1068145 intron CR44779 + chrX 1072554 intron CR44779 + chrX_5_1065001 chrX_1065001 RAL-837 2606 chrX 1357759 1357805 chrX 1367949 1367995 Doc 10 10180 4.5 5.5 5.0 1.7 10236 chrX 1357759 intergenic png - chrX 1362877 intergenic not near genes chrX 1367995 intergenic not near genes chrX_10_1360001 chrX_1360001 RAL-837 2607 chrX 1518025 1518050 chrX 1523447 1523472 jockey 6 5421 2.5 4.5 3.5 1.3 5447 chrX 1518025 intergenic inc + chrX 1520748 intergenic not near genes chrX 1523472 intergenic not near genes chrX_6_1520001 chrX_1520001 RAL-837 2608 chrX 1930525 1930563 chrX 1938116 1938154 opus 4 7591 2.0 3.5 2.8 1.1 7629 chrX 1930525 intergenic CG11596 + chrX 1934340 intergenic not near genes chrX 1938154 3` UTR CG3857 - chrX_4_1930001 chrX_1930001 RAL-837 2609 chrX 1954891 1954911 chrX 1962824 1962841 Stalker2 7 7947 5.5 2.0 3.8 1.5 7950 chrX 1954891 intron Hr4 + chrX 1958866 intron Hr4 + chrX 1962841 intron Hr4 + chrX_7_1955001 chrX_1955001 RAL-837 2610 chrX 1983323 1983359 chrX 1983426 1983435 9 99 0.5 2.5 1.5 3.6 112 chrX 1983323 intron Hr4 + chrX 1983379 intron Hr4 + chrX 1983435 intron Hr4 + chrX_9_1980001 chrX_1980001 RAL-837 2611 chrX 2023962 2023985 chrX 2024098 2024118 5 140 16.0 21.0 18.5 0.3 156 chrX 2023962 3` UTR,3` UTR east +,Actn - chrX 2024040 3` UTR,3` UTR east +,Actn - chrX 2024118 3` UTR,3` UTR east +,Actn - chrX_5_2020001 chrX_2020001 RAL-837 2612 chrX 2020866 2020898 chrX 2025565 2025617 11 4708 18.5 24.0 21.2 0.5 4751 chrX 2020866 exon east + chrX 2023242 3` UTR east + chrX 2025617 exon Actn - chrX_11_2020001 chrX_2020001 RAL-837 2613 chrX 2146636 2146685 chrX 2146748 2146790 8 104 1.5 1.5 1.5 3.2 154 chrX 2146636 intron Pgd + chrX 2146713 intron Pgd + chrX 2146790 intron Pgd + chrX_8_2145001 chrX_2145001 RAL-837 2614 chrX 2399822 2399869 chrX 2408190 2408242 roo 9 8368 3.0 3.0 3.0 2.2 8420 chrX 2399822 intergenic not near genes chrX 2404032 intergenic not near genes chrX 2408242 intergenic not near genes chrX_9_2400001 chrX_2400001 RAL-837 2615 chrX 2429661 2429668 chrX 2429748 2429765 4 96 0.0 3.5 1.8 1.4 104 chrX 2429661 intergenic not near genes chrX 2429713 intergenic not near genes chrX 2429765 intergenic not near genes chrX_4_2425001 chrX_2425001 RAL-837 2616 chrX 2456681 2456715 chrX 2456956 2456986 6 274 4.5 5.5 5.0 1.0 305 chrX 2456681 5` UTR boi - chrX 2456834 intron boi - chrX 2456986 intron boi - chrX_6_2455001 chrX_2455001 RAL-837 2617 chrX 2559352 2559385 chrX 2559455 2559461 6 94 4.5 7.0 5.8 0.9 109 chrX 2559352 intron Pdfr + chrX 2559406 intron Pdfr + chrX 2559461 intron Pdfr + chrX_6_2555001 chrX_2555001 RAL-837 2618 chrX 2568186 2568215 chrX 2568445 2568483 6 262 6.5 3.0 4.8 1.0 297 chrX 2568186 intron Pdfr + chrX 2568334 intron Pdfr + chrX 2568483 intron Pdfr + chrX_6_2565001 chrX_2565001 RAL-837 2619 chrX 2578794 2578840 chrX 2578906 2578952 10 104 2.0 3.5 2.8 2.6 158 chrX 2578794 intergenic Pdfr +,Vha36-3 - chrX 2578873 intergenic Vha36-3 -,Pdfr + chrX 2578952 intergenic Vha36-3 -,Pdfr + chrX_10_2575001 chrX_2575001 RAL-837 2620 chrX 2610369 2610381 chrX 2617506 2617515 HMS-Beagle 4 7136 8.0 2.5 5.2 0.6 7146 chrX 2610369 intergenic CG8636 - chrX 2613942 intergenic not near genes chrX 2617515 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-837 2621 chrX 2664392 2664404 chrX 2665532 2665570 1360 4 1157 5.0 3.0 4.0 0.8 1178 chrX 2664392 intron sgg + chrX 2664981 intron sgg + chrX 2665570 intron sgg + chrX_4_2660001 chrX_2660001 RAL-837 2622 chrX 2844883 2844931 chrX 2852313 2852356 mdg1 8 7427 3.0 4.0 3.5 1.8 7473 chrX 2844883 intron kirre + chrX 2848620 intron kirre + chrX 2852356 intron kirre + chrX_8_2845001 chrX_2845001 RAL-837 2623 chrX 2888094 2888142 chrX 2888192 2888240 7 97 4.5 2.0 3.2 1.7 146 chrX 2888094 intron kirre + chrX 2888167 intron kirre + chrX 2888240 intron kirre + chrX_7_2885001 chrX_2885001 RAL-837 2624 chrX 2917076 2917108 chrX 2917176 2917208 7 97 5.0 1.5 3.2 1.7 132 chrX 2917076 intron kirre + chrX 2917142 intron kirre + chrX 2917208 intron kirre + chrX_7_2915001 chrX_2915001 RAL-837 2625 chrX 3058002 3058051 chrX 3058263 3058312 pogo 8 261 3.0 2.5 2.8 2.1 310 chrX 3058002 intron kirre + chrX 3058157 intron kirre + chrX 3058312 intron kirre + chrX_8_3055001 chrX_3055001 RAL-837 2626 chrX 3082584 3082600 chrX 3082681 3082697 5 97 3.5 5.5 4.5 0.9 113 chrX 3082584 intron kirre + chrX 3082640 intron kirre + chrX 3082697 intron kirre + chrX_5_3080001 chrX_3080001 RAL-837 2627 chrX 3218494 3218539 chrX 3227658 3227704 roo 6 9166 1.0 2.0 1.5 2.4 9210 chrX 3218494 intron dnc + chrX 3223099 intron dnc + chrX 3227704 intron dnc + chrX_6_3220001 chrX_3220001 RAL-837 2628 chrX 3243634 3243662 chrX 3243719 3243747 4 98 3.0 2.5 2.8 1.1 113 chrX 3243634 intron dnc + chrX 3243690 intron dnc + chrX 3243747 intron dnc + chrX_4_3240001 chrX_3240001 RAL-837 2629 chrX 3271671 3271696 chrX 3271767 3271793 6 96 3.5 2.5 3.0 1.5 122 chrX 3271671 intron dnc + chrX 3271732 intron dnc + chrX 3271793 intron dnc + chrX_6_3270001 chrX_3270001 RAL-837 2630 chrX 3275511 3275539 chrX 3275618 3275646 6 105 5.5 3.5 4.5 1.1 135 chrX 3275511 intron dnc + chrX 3275578 intron dnc + chrX 3275646 intron dnc + chrX_6_3275001 chrX_3275001 RAL-837 2631 chrX 3398123 3398379 chrX 3398224 3398477 14 99 2.0 4.0 3.0 3.5 354 chrX 3398123 intron,intron CR44999 +,CG12535 - chrX 3398300 intron,intron CR44999 +,CG12535 - chrX 3398477 intron,intron CR44999 +,CG12535 - chrX_14_3395001 chrX_3395001 RAL-837 2632 chrX 3408976 3409012 chrX 3409062 3409094 12 91 1.5 1.5 1.5 4.8 118 chrX 3408976 intron,intron CR44999 +,CG12535 - chrX 3409035 intron,intron CR44999 +,CG12535 - chrX 3409094 intron,intron CR44999 +,CG12535 - chrX_12_3405001 chrX_3405001 RAL-837 2633 chrX 3414995 3415049 chrX 3421201 3421208 3S18 10 6198 4.5 4.5 4.5 1.8 6213 chrX 3414995 intron,intron CR44999 +,CG12535 - chrX 3418102 intron,intron CR44999 +,CG12535 - chrX 3421208 intron,intron CR44999 +,CG12535 - chrX_10_3415001 chrX_3415001 RAL-837 2634 chrX 3436972 3436981 chrX 3437159 3437168 4 187 3.0 8.5 5.8 0.6 196 chrX 3436972 intron,intron CR44999 +,CG12535 - chrX 3437070 intron,intron CR44999 +,CG12535 - chrX 3437168 intron,intron CR44999 +,CG12535 - chrX_4_3435001 chrX_3435001 RAL-837 2635 chrX 3459962 3460004 chrX 3460059 3460069 13 91 5.0 1.5 3.2 3.1 107 chrX 3459962 intron,intron CR44999 +,CG16782 - chrX 3460016 intron,intron CR44999 +,CG16782 - chrX 3460069 intron,5` UTR CR44999 +,CG16782 - chrX_13_3460001 chrX_3460001 RAL-837 2636 chrX 3493073 3493111 chrX 3502251 3502290 roo 11 9169 1.5 2.0 1.8 3.9 9217 chrX 3493073 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502290 intron,intron CR44999 +,Gas8 - chrX_11_3495001 chrX_3495001 RAL-837 2637 chrX 3597102 3597130 chrX 3597210 3597238 9 107 0.5 2.0 1.2 4.1 136 chrX 3597102 intron AstA-R1 + chrX 3597170 intron AstA-R1 + chrX 3597238 intron AstA-R1 + chrX_9_3595001 chrX_3595001 RAL-837 2638 chrX 3597532 3597579 chrX 3619720 3619720 roo 8 22175 3.5 1.0 2.2 2.5 22188 chrX 3597532 intron AstA-R1 + chrX 3608626 intron AstA-R1 + chrX 3619720 intron AstA-R1 + chrX_8_3605001 chrX_3605001 RAL-837 2639 chrX 3657411 3657438 chrX 3657500 3657538 9 96 3.5 3.5 3.5 2.0 127 chrX 3657411 intron AstA-R1 + chrX 3657474 intron AstA-R1 + chrX 3657538 intron AstA-R1 + chrX_9_3655001 chrX_3655001 RAL-837 2640 chrX 3726780 3726794 chrX 3730160 3730212 NOF 4 3397 4.0 3.5 3.8 0.8 3432 chrX 3726780 intron tlk + chrX 3728496 intron tlk + chrX 3730212 intron tlk + chrX_4_3725001 chrX_3725001 RAL-837 2641 chrX 3866105 3866129 chrX 3866183 3866227 7 94 2.5 1.0 1.8 2.5 122 chrX 3866105 intron yin - chrX 3866166 intron yin - chrX 3866227 intron yin - chrX_7_3865001 chrX_3865001 RAL-837 2642 chrX 3880454 3880478 chrX 3880560 3880584 4 106 5.0 6.5 5.8 0.6 130 chrX 3880454 intergenic VhaAC39-1 + chrX 3880519 intergenic VhaAC39-1 + chrX 3880584 intergenic VhaAC39-1 + chrX_4_3880001 chrX_3880001 RAL-837 2643 chrX 3881252 3881302 chrX 3881411 3881461 11 154 1.0 2.0 1.5 4.4 209 chrX 3881252 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881461 exon VhaAC39-1 + chrX_11_3880001 chrX_3880001 RAL-837 2644 chrX 3926295 3926340 chrX 3927554 3927603 11 1261 23.5 14.0 18.8 0.6 1308 chrX 3926295 intron CG42541 - chrX 3926949 intron CG42541 - chrX 3927603 intron CG42541 - chrX_11_3925001 chrX_3925001 RAL-837 2645 chrX 3986846 3986890 chrX 3994499 3994511 412 11 7644 1.5 0.5 1.0 5.5 7665 chrX 3986846 intergenic not near genes chrX 3990678 intergenic not near genes chrX 3994511 intergenic not near genes chrX_11_3990001 chrX_3990001 RAL-837 2646 chrX 4132674 4132700 chrX 4132841 4132888 8 185 4.0 3.5 3.8 1.7 214 chrX 4132674 3` UTR GlcAT-I + chrX 4132781 3` UTR GlcAT-I + chrX 4132888 3` UTR Fas2 - chrX_8_4130001 chrX_4130001 RAL-837 2647 chrX 4157902 4157916 chrX 4164954 4164984 297 5 7061 2.0 4.0 3.0 1.2 7082 chrX 4157902 intron Fas2 - chrX 4161443 intron Fas2 - chrX 4164984 intron Fas2 - chrX_5_4160001 chrX_4160001 RAL-837 2648 chrX 4324371 4324415 chrX 4324468 4324512 5 94 2.0 3.5 2.8 1.3 141 chrX 4324371 intron norpA + chrX 4324442 intron norpA + chrX 4324512 intron norpA + chrX_5_4320001 chrX_4320001 RAL-837 2649 chrX 4343877 4343892 chrX 4344004 4344026 4 132 1.0 3.0 2.0 1.3 149 chrX 4343877 intron norpA + chrX 4343952 intron norpA + chrX 4344026 intron norpA + chrX_4_4340001 chrX_4340001 RAL-837 2650 chrX 4396994 4397005 chrX 4397062 4397089 4 87 2.5 3.0 2.8 1.1 95 chrX 4396994 intron CR32773 - chrX 4397042 intron CR32773 - chrX 4397089 intron CR32773 - chrX_4_4395001 chrX_4395001 RAL-837 2651 chrX 4398817 4398833 chrX 4398909 4398923 6 100 1.0 2.0 1.5 2.4 106 chrX 4398817 intron CR32773 - chrX 4398870 intron CR32773 - chrX 4398923 intron CR32773 - chrX_6_4395001 chrX_4395001 RAL-837 2652 chrX 4515835 4515856 chrX 4515917 4515929 6 91 3.0 3.5 3.2 1.4 94 chrX 4515835 intron CR32773 - chrX 4515882 intron CR32773 - chrX 4515929 intron CR32773 - chrX_6_4515001 chrX_4515001 RAL-837 2653 chrX 4557829 4557847 chrX 4557926 4557944 4 97 3.5 0.5 2.0 1.3 115 chrX 4557829 intron CR32773 - chrX 4557886 intron CR32773 - chrX 4557944 intron CR32773 - chrX_4_4555001 chrX_4555001 RAL-837 2654 chrX 4660807 4660827 chrX 4660926 4660946 5 119 5.0 0.0 2.5 1.4 139 chrX 4660807 intron CG3009 - chrX 4660876 intron CG3009 - chrX 4660946 intron CG3009 - chrX_5_4660001 chrX_4660001 RAL-837 2655 chrX 4700398 4700419 chrX 4700735 4700775 jockey 6 350 3.0 4.0 3.5 1.3 377 chrX 4700398 3` UTR ctp + chrX 4700586 3` UTR ctp + chrX 4700775 3` UTR ctp + chrX_6_4700001 chrX_4700001 RAL-837 2656 chrX 4723553 4723583 chrX 4723653 4723678 5 97 4.0 5.0 4.5 0.9 125 chrX 4723553 exon Proc-R + chrX 4723616 intron Proc-R + chrX 4723678 intron Proc-R + chrX_5_4720001 chrX_4720001 RAL-837 2657 chrX 4757906 4757931 chrX 4758241 4758251 8 333 2.0 1.5 1.8 2.9 345 chrX 4757906 intergenic not near genes chrX 4758078 intergenic not near genes chrX 4758251 intergenic not near genes chrX_8_4755001 chrX_4755001 RAL-837 2658 chrX 4763230 4763279 chrX 4763738 4763787 Stalker4 6 504 3.5 1.0 2.2 1.9 557 chrX 4763230 intergenic not near genes chrX 4763508 intergenic not near genes chrX 4763787 intergenic not near genes chrX_6_4760001 chrX_4760001 RAL-837 2659 chrX 4827962 4827995 chrX 4835353 4835386 Stalker4 9 7388 2.5 4.5 3.5 2.0 7424 chrX 4827962 intergenic not near genes chrX 4831674 intergenic not near genes chrX 4835386 intergenic not near genes chrX_9_4830001 chrX_4830001 RAL-837 2660 chrX 4864156 4864183 chrX 4864254 4864261 4 93 4.5 4.5 4.5 0.7 105 chrX 4864156 intron CG42594 + chrX 4864208 intron CG42594 + chrX 4864261 intron CG42594 + chrX_4_4860001 chrX_4860001 RAL-837 2661 chrX 4965543 4965588 chrX 4965643 4965666 6 93 1.5 5.5 3.5 1.3 123 chrX 4965543 intron CR44833 - chrX 4965604 intron CR44833 - chrX 4965666 intron CR44833 - chrX_6_4965001 chrX_4965001 RAL-837 2662 chrX 4967912 4967936 chrX 4968020 4968033 5 104 0.0 4.5 2.2 1.6 121 chrX 4967912 intron CR44833 - chrX 4967972 intron CR44833 - chrX 4968033 intron CR44833 - chrX_5_4965001 chrX_4965001 RAL-837 2663 chrX 4975574 4975606 chrX 4975771 4975803 7 196 2.0 2.0 2.0 2.3 229 chrX 4975574 intron CR44833 - chrX 4975688 intron CR44833 - chrX 4975803 intron CR44833 - chrX_7_4975001 chrX_4975001 RAL-837 2664 chrX 4990027 4990074 chrX 4997261 4997308 roo 8 7232 2.5 2.5 2.5 2.3 7281 chrX 4990027 intron CR44833 - chrX 4993668 intron CR44833 - chrX 4997308 intron CR44833 - chrX_8_4990001 chrX_4990001 RAL-837 2665 chrX 5096267 5096297 chrX 5103852 5103882 springer 8 7581 3.0 5.0 4.0 1.6 7615 chrX 5096267 intron,intron CG15465 +,rg + chrX 5100074 intron,intron CG15465 +,rg + chrX 5103882 intron,intron CG15465 +,rg + chrX_8_5100001 chrX_5100001 RAL-837 2666 chrX 5096299 5096304 chrX 5103842 5103875 springer 5 7565 2.5 3.5 3.0 1.2 7576 chrX 5096299 intron,intron CG15465 +,rg + chrX 5100087 intron,intron CG15465 +,rg + chrX 5103875 intron,intron CG15465 +,rg + chrX_5_5100001 chrX_5100001 RAL-837 2667 chrX 5131392 5131430 chrX 5131477 5131506 5 89 2.0 2.5 2.2 1.6 114 chrX 5131392 intron,intron CG15465 +,rg + chrX 5131449 intron,intron CG15465 +,rg + chrX 5131506 intron,intron CG15465 +,rg + chrX_5_5130001 chrX_5130001 RAL-837 2668 chrX 5206303 5206333 chrX 5206577 5206597 9 282 0.5 4.0 2.2 2.8 294 chrX 5206303 intron,intron CG15465 +,rg + chrX 5206450 intron,intron CG15465 +,rg + chrX 5206597 intron,intron CG15465 +,rg + chrX_9_5205001 chrX_5205001 RAL-837 2669 chrX 5345400 5345426 chrX 5345511 5345540 8 122 1.0 1.5 1.2 3.6 140 chrX 5345400 intron SK + chrX 5345470 intron SK + chrX 5345540 intron SK + chrX_8_5345001 chrX_5345001 RAL-837 2670 chrX 5349294 5349308 chrX 5349352 5349405 6 86 2.5 5.0 3.8 1.2 111 chrX 5349294 intron SK + chrX 5349350 intron SK + chrX 5349405 intron SK + chrX_6_5345001 chrX_5345001 RAL-837 2671 chrX 5366284 5366334 chrX 5366432 5366482 9 148 1.5 4.0 2.8 2.4 198 chrX 5366284 intron SK + chrX 5366383 intron SK + chrX 5366482 intron SK + chrX_9_5365001 chrX_5365001 RAL-837 2672 chrX 5473567 5473617 chrX 5473663 5473710 10 93 1.5 1.5 1.5 4.0 143 chrX 5473567 intron SPR + chrX 5473638 intron SPR + chrX 5473710 intron SPR + chrX_10_5470001 chrX_5470001 RAL-837 2673 chrX 5524834 5524846 chrX 5528717 5528729 412 4 3883 5.5 3.0 4.2 0.8 3895 chrX 5524834 intergenic snoRNA:Psi28S-3342 - chrX 5526782 intergenic not near genes chrX 5528729 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-837 2674 chrX 5883798 5883839 chrX 5884059 5884091 pogo 11 254 2.5 3.5 3.0 2.8 293 chrX 5883798 intron CR45668 - chrX 5883944 intron CR45668 - chrX 5884091 intron CR45668 - chrX_11_5880001 chrX_5880001 RAL-837 2675 chrX 5884150 5884182 chrX 5884411 5884443 pogo 8 260 4.0 1.0 2.5 2.3 293 chrX 5884150 intron CR45668 - chrX 5884296 intron CR45668 - chrX 5884443 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-837 2676 chrX 6118686 6118725 chrX 6118778 6118827 12 98 3.5 5.0 4.2 2.3 141 chrX 6118686 intron Ca-alpha1T - chrX 6118756 intron Ca-alpha1T - chrX 6118827 intron Ca-alpha1T - chrX_12_6115001 chrX_6115001 RAL-837 2677 chrX 6168091 6168122 chrX 6168183 6168222 9 98 2.5 2.5 2.5 2.6 131 chrX 6168091 intron Ca-alpha1T - chrX 6168156 intron Ca-alpha1T - chrX 6168222 intron Ca-alpha1T - chrX_9_6165001 chrX_6165001 RAL-837 2678 chrX 6171580 6171603 chrX 6179027 6179056 Quasimodo 6 7451 4.5 3.0 3.8 1.2 7476 chrX 6171580 intron Ca-alpha1T - chrX 6175318 intron Ca-alpha1T - chrX 6179056 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-837 2679 chrX 6312175 6312185 chrX 6312278 6312288 4 102 9.0 3.5 6.2 0.6 113 chrX 6312175 intron CG15894 + chrX 6312232 intron CG15894 + chrX 6312288 intron CG15894 + chrX_4_6310001 chrX_6310001 RAL-837 2680 chrX 6312187 6312220 chrX 6312272 6312300 11 95 5.5 3.0 4.2 2.1 113 chrX 6312187 intron CG15894 + chrX 6312244 intron CG15894 + chrX 6312300 intron CG15894 + chrX_11_6310001 chrX_6310001 RAL-837 2681 chrX 6314433 6314448 chrX 6314499 6314521 4 69 2.5 3.5 3.0 1.0 88 chrX 6314433 intron CG15894 + chrX 6314477 intron CG15894 + chrX 6314521 intron CG15894 + chrX_4_6310001 chrX_6310001 RAL-837 2682 chrX 6335219 6335237 chrX 6337743 6337767 Tirant 5 2527 0.0 7.0 3.5 1.1 2548 chrX 6335219 intergenic not near genes chrX 6336493 intergenic not near genes chrX 6337767 5` UTR CG3842 + chrX_5_6335001 chrX_6335001 RAL-837 2683 chrX 6382749 6382773 chrX 6382849 6382873 5 96 2.5 2.5 2.5 1.4 124 chrX 6382749 intergenic not near genes chrX 6382811 intergenic not near genes chrX 6382873 intergenic not near genes chrX_5_6380001 chrX_6380001 RAL-837 2684 chrX 6388657 6388691 chrX 6388744 6388787 6 86 1.5 2.0 1.8 2.1 130 chrX 6388657 intergenic not near genes chrX 6388722 intergenic not near genes chrX 6388787 intergenic not near genes chrX_6_6385001 chrX_6385001 RAL-837 2685 chrX 6392858 6392876 chrX 6397643 6397661 Doc 7 4785 3.0 4.5 3.8 1.5 4803 chrX 6392858 intergenic not near genes chrX 6395260 intergenic not near genes chrX 6397661 intergenic not near genes chrX_7_6395001 chrX_6395001 RAL-837 2686 chrX 6481698 6481718 chrX 6481796 6481798 5 94 3.5 3.0 3.2 1.2 100 chrX 6481698 intron CG42340 - chrX 6481748 intron CG42340 - chrX 6481798 intron CG42340 - chrX_5_6480001 chrX_6480001 RAL-837 2687 chrX 6532633 6532647 chrX 6532713 6532747 5 89 1.0 3.5 2.2 1.6 114 chrX 6532633 intron RpL7A - chrX 6532690 intron RpL7A - chrX 6532747 intron RpL7A - chrX_5_6530001 chrX_6530001 RAL-837 2688 chrX 6539910 6539927 chrX 6540016 6540049 6 115 4.5 1.5 3.0 1.5 139 chrX 6539910 intergenic not near genes chrX 6539980 intergenic not near genes chrX 6540049 intergenic not near genes chrX_6_6535001 chrX_6535001 RAL-837 2689 chrX 6562817 6562844 chrX 6571319 6571346 Tirant 6 8499 4.5 4.5 4.5 1.1 8529 chrX 6562817 intron CG34417 + chrX 6567082 intron CG34417 + chrX 6571346 intron CG34417 + chrX_6_6565001 chrX_6565001 RAL-837 2690 chrX 6751504 6751528 chrX 6751592 6751641 9 107 1.0 5.0 3.0 2.2 137 chrX 6751504 intron CG14439 + chrX 6751572 intron CG14439 + chrX 6751641 intron CG14439 + chrX_9_6750001 chrX_6750001 RAL-837 2691 chrX 6897574 6897581 chrX 6897672 6897679 4 98 2.5 0.5 1.5 1.6 105 chrX 6897574 intergenic not near genes chrX 6897626 intergenic not near genes chrX 6897679 intergenic not near genes chrX_4_6895001 chrX_6895001 RAL-837 2692 chrX 6897589 6897708 chrX 6897687 6897798 11 120 0.5 0.5 0.5 7.3 209 chrX 6897589 intergenic not near genes chrX 6897694 intergenic not near genes chrX 6897798 intergenic not near genes chrX_11_6895001 chrX_6895001 RAL-837 2693 chrX 6989484 6989524 chrX 6989591 6989631 7 107 2.5 4.0 3.2 1.7 147 chrX 6989484 intron ogre - chrX 6989558 intron ogre - chrX 6989631 intron ogre - chrX_7_6985001 chrX_6985001 RAL-837 2694 chrX 7023579 7023628 chrX 7030989 7031003 Tabor 7 7388 5.5 0.5 3.0 1.8 7424 chrX 7023579 intron CG12541 - chrX 7027291 intron CG12541 - chrX 7031003 intron CG12541 - chrX_7_7025001 chrX_7025001 RAL-837 2695 chrX 7125225 7125268 chrX 7134404 7134447 roo 9 9176 1.0 3.5 2.2 2.8 9222 chrX 7125225 intergenic not near genes chrX 7129836 intergenic not near genes chrX 7134447 intergenic not near genes chrX_9_7125001 chrX_7125001 RAL-837 2696 chrX 7345187 7345212 chrX 7345292 7345294 4 103 2.0 1.5 1.8 1.4 107 chrX 7345187 intron,intron CR44357 -,CG1677 - chrX 7345240 intron,intron CR44357 -,CG1677 - chrX 7345294 intron,intron CR44357 -,CG1677 - chrX_4_7345001 chrX_7345001 RAL-837 2697 chrX 7570623 7570668 chrX 7570777 7570822 9 151 0.5 2.0 1.2 4.1 199 chrX 7570623 intergenic not near genes chrX 7570722 intergenic not near genes chrX 7570822 intergenic not near genes chrX_9_7570001 chrX_7570001 RAL-837 2698 chrX 7702909 7702925 chrX 7703347 7703374 jockey 5 447 4.5 0.0 2.2 1.6 465 chrX 7702909 intron CHES-1-like - chrX 7703142 intron CHES-1-like - chrX 7703374 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-837 2699 chrX 7702931 7702934 chrX 7703346 7703386 jockey 4 436 3.0 0.0 1.5 1.6 455 chrX 7702931 intron CHES-1-like - chrX 7703158 intron CHES-1-like - chrX 7703386 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-837 2700 chrX 7720570 7720581 chrX 7720646 7720683 6 95 0.5 3.0 1.8 2.1 113 chrX 7720570 intergenic not near genes chrX 7720626 intergenic not near genes chrX 7720683 intergenic not near genes chrX_6_7720001 chrX_7720001 RAL-837 2701 chrX 7737160 7737165 chrX 7737242 7737266 4 92 5.5 1.0 3.2 1.0 106 chrX 7737160 5` UTR Tom40 + chrX 7737213 intron Tom40 + chrX 7737266 intron Tom40 + chrX_4_7735001 chrX_7735001 RAL-837 2702 chrX 7832422 7832462 chrX 7832521 7832571 11 101 1.5 1.5 1.5 4.4 149 chrX 7832422 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832571 intron CG1402 + chrX_11_7830001 chrX_7830001 RAL-837 2703 chrX 7845707 7845751 chrX 7847218 7847248 hopper2 6 1498 4.0 3.0 3.5 1.3 1541 chrX 7845707 intergenic not near genes chrX 7846478 intergenic not near genes chrX 7847248 intergenic not near genes chrX_6_7845001 chrX_7845001 RAL-837 2704 chrX 7881852 7881879 chrX 7881933 7881981 10 94 0.0 3.0 1.5 4.0 129 chrX 7881852 intergenic Ir7f -,Ir7e - chrX 7881916 intergenic Ir7f -,Ir7e - chrX 7881981 3` UTR Ir7f - chrX_10_7880001 chrX_7880001 RAL-837 2705 chrX 7953166 7953209 chrX 7953285 7953308 13 110 1.5 1.0 1.2 5.9 142 chrX 7953166 3` UTR CG42593 + chrX 7953237 3` UTR CG42593 + chrX 7953308 3` UTR CG42593 + chrX_13_7950001 chrX_7950001 RAL-837 2706 chrX 7977048 7977085 chrX 7977153 7977195 7 100 1.0 0.0 0.5 4.7 147 chrX 7977048 intron sn + chrX 7977122 intron sn + chrX 7977195 intron sn + chrX_7_7975001 chrX_7975001 RAL-837 2707 chrX 8031431 8031444 chrX 8035760 8035771 Juan 5 4327 3.0 6.5 4.8 0.9 4340 chrX 8031431 intergenic not near genes chrX 8033601 intergenic not near genes chrX 8035771 3` UTR CG2233 - chrX_5_8030001 chrX_8030001 RAL-837 2708 chrX 8163612 8163656 chrX 8163714 8163758 9 97 0.0 3.5 1.8 3.2 146 chrX 8163612 intergenic CR45536 + chrX 8163685 intergenic CR45536 + chrX 8163758 intergenic CR45536 + chrX_9_8160001 chrX_8160001 RAL-837 2709 chrX 8364836 8364870 chrX 8365253 8365287 BS 4 417 4.0 3.0 3.5 0.9 451 chrX 8364836 intron nAChRalpha3 - chrX 8365062 intron nAChRalpha3 - chrX 8365287 intron nAChRalpha3 - chrX_4_8365001 chrX_8365001 RAL-837 2710 chrX 8421468 8421492 chrX 8421580 8421588 5 108 1.5 7.5 4.5 0.9 120 chrX 8421468 intron Trf2 + chrX 8421528 intron Trf2 + chrX 8421588 intron Trf2 + chrX_5_8420001 chrX_8420001 RAL-837 2711 chrX 8450998 8451010 chrX 8451097 8451109 6 99 5.5 9.5 7.5 0.7 111 chrX 8450998 intron org-1 - chrX 8451054 intron org-1 - chrX 8451109 exon org-1 - chrX_6_8450001 chrX_8450001 RAL-837 2712 chrX 8500926 8500959 chrX 8501094 8501107 5 172 4.0 0.0 2.0 1.7 181 chrX 8500926 intron CG33181 + chrX 8501016 intron CG33181 + chrX 8501107 intron CG33181 + chrX_5_8500001 chrX_8500001 RAL-837 2713 chrX 8506005 8506021 chrX 8506103 8506119 5 97 8.5 3.0 5.8 0.7 114 chrX 8506005 intron CG33181 + chrX 8506062 intron CG33181 + chrX 8506119 intron CG33181 + chrX_5_8505001 chrX_8505001 RAL-837 2714 chrX 8506512 8506542 chrX 8506740 8506770 7 228 5.0 3.0 4.0 1.4 258 chrX 8506512 intron CG33181 + chrX 8506641 intron CG33181 + chrX 8506770 intron CG33181 + chrX_7_8505001 chrX_8505001 RAL-837 2715 chrX 8509099 8509150 chrX 8509196 8509246 4 96 2.5 3.0 2.8 1.1 147 chrX 8509099 intron CG33181 + chrX 8509172 intron CG33181 + chrX 8509246 intron CG33181 + chrX_4_8505001 chrX_8505001 RAL-837 2716 chrX 8544127 8544164 chrX 8544226 8544263 5 99 1.5 5.0 3.2 1.2 136 chrX 8544127 intron Nrg + chrX 8544195 intron Nrg + chrX 8544263 intron Nrg + chrX_5_8540001 chrX_8540001 RAL-837 2717 chrX 8649707 8649752 chrX 8649914 8649959 10 207 3.0 3.0 3.0 2.5 252 chrX 8649707 intron oc - chrX 8649833 intron oc - chrX 8649959 intron oc - chrX_10_8645001 chrX_8645001 RAL-837 2718 chrX 8658682 8658708 chrX 8658797 8658797 5 109 3.5 0.0 1.8 1.8 115 chrX 8658682 intergenic not near genes chrX 8658740 intergenic not near genes chrX 8658797 intergenic not near genes chrX_5_8655001 chrX_8655001 RAL-837 2719 chrX 8811028 8811054 chrX 8811145 8811150 4 112 2.0 2.5 2.2 1.2 122 chrX 8811028 intergenic not near genes chrX 8811089 intergenic not near genes chrX 8811150 intergenic not near genes chrX_4_8810001 chrX_8810001 RAL-837 2720 chrX 8860783 8860800 chrX 8860871 8860879 7 97 0.0 5.0 2.5 2.0 96 chrX 8860783 intron CG12075 + chrX 8860831 intron CG12075 + chrX 8860879 intron CG12075 + chrX_7_8860001 chrX_8860001 RAL-837 2721 chrX 8922348 8922360 chrX 8922767 8922814 jockey 7 445 4.0 2.0 3.0 1.8 466 chrX 8922348 intron rdgA + chrX 8922581 intron rdgA + chrX 8922814 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-837 2722 chrX 8948742 8948784 chrX 8956272 8956314 roo 8 7528 3.5 6.0 4.8 1.4 7572 chrX 8948742 intron rdgA + chrX 8952528 intron rdgA + chrX 8956314 intron rdgA + chrX_8_8950001 chrX_8950001 RAL-837 2723 chrX 8958071 8958111 chrX 8958357 8958396 8 285 2.0 1.0 1.5 3.2 325 chrX 8958071 intron rdgA + chrX 8958234 intron rdgA + chrX 8958396 intron rdgA + chrX_8_8955001 chrX_8955001 RAL-837 2724 chrX 9062716 9062757 chrX 9062814 9062850 5 97 1.5 0.0 0.8 2.8 134 chrX 9062716 intron CG15365 - chrX 9062783 intron CG15365 - chrX 9062850 intron CG15365 - chrX_5_9060001 chrX_9060001 RAL-837 2725 chrX 9152056 9152094 chrX 9152159 9152162 8 97 8.0 3.0 5.5 1.2 106 chrX 9152056 intergenic dalao +,His3.3B - chrX 9152109 intergenic dalao +,His3.3B - chrX 9152162 intergenic dalao +,His3.3B - chrX_8_9150001 chrX_9150001 RAL-837 2726 chrX 9218059 9218081 chrX 9218170 9218171 6 108 4.0 0.5 2.2 1.9 112 chrX 9218059 3` UTR t - chrX 9218115 3` UTR t - chrX 9218171 3` UTR t - chrX_6_9215001 chrX_9215001 RAL-837 2727 chrX 9273002 9273040 chrX 9273099 9273141 10 98 3.0 4.0 3.5 2.2 139 chrX 9273002 intergenic Cfp1 -,CG16892 + chrX 9273072 intergenic Cfp1 -,CG16892 + chrX 9273141 intergenic Cfp1 -,CG16892 + chrX_10_9270001 chrX_9270001 RAL-837 2728 chrX 9337926 9337973 chrX 9338038 9338085 13 108 5.0 3.5 4.2 2.5 159 chrX 9337926 intron CG34449 - chrX 9338006 intron CG34449 - chrX 9338085 exon CG34449 - chrX_13_9335001 chrX_9335001 RAL-837 2729 chrX 9439408 9439460 chrX 9439505 9439557 5 92 3.0 4.0 3.5 1.1 149 chrX 9439408 intron mgl - chrX 9439482 intron mgl - chrX 9439557 intron mgl - chrX_5_9435001 chrX_9435001 RAL-837 2730 chrX 9473837 9473880 chrX 9474087 9474134 6 253 2.0 4.0 3.0 1.5 297 chrX 9473837 intron mgl - chrX 9473986 intron mgl - chrX 9474134 intron mgl - chrX_6_9470001 chrX_9470001 RAL-837 2731 chrX 9508132 9508156 chrX 9509670 9509671 jockey 9 1534 3.0 3.0 3.0 2.2 1539 chrX 9508132 intron CG32700 - chrX 9508902 intron CG32700 - chrX 9509671 intron CG32700 - chrX_9_9505001 chrX_9505001 RAL-837 2732 chrX 9531642 9531671 chrX 9531742 9531771 5 98 2.5 2.5 2.5 1.4 129 chrX 9531642 intron CG32700 - chrX 9531706 intron CG32700 - chrX 9531771 intron CG32700 - chrX_5_9530001 chrX_9530001 RAL-837 2733 chrX 9575806 9575822 chrX 9576120 9576166 mdg3 6 323 3.5 5.0 4.2 1.2 360 chrX 9575806 intron,exon CG32699 -,CG42395 - chrX 9575986 intron,intron CG32699 -,CG42395 - chrX 9576166 intron,5` UTR CG32699 -,CG42395 - chrX_6_9575001 chrX_9575001 RAL-837 2734 chrX 9577229 9577242 chrX 9577927 9577963 5 715 3.0 2.0 2.5 1.4 734 chrX 9577229 intron CG32699 - chrX 9577596 intron CG32699 - chrX 9577963 intron CG32699 - chrX_5_9575001 chrX_9575001 RAL-837 2735 chrX 9758027 9758079 chrX 9758132 9758169 8 101 1.5 0.0 0.8 4.4 142 chrX 9758027 intergenic not near genes chrX 9758098 intergenic not near genes chrX 9758169 intergenic not near genes chrX_8_9755001 chrX_9755001 RAL-837 2736 chrX 9791854 9791895 chrX 9791960 9792012 10 111 2.0 2.0 2.0 3.3 158 chrX 9791854 intron CG32698 + chrX 9791933 intron CG32698 + chrX 9792012 intron CG32698 + chrX_10_9790001 chrX_9790001 RAL-837 2737 chrX 9839365 9839375 chrX 9839458 9839477 5 100 0.5 5.0 2.8 1.3 112 chrX 9839365 intron CG32698 + chrX 9839421 intron CG32698 + chrX 9839477 intron CG32698 + chrX_5_9835001 chrX_9835001 RAL-837 2738 chrX 9906857 9906863 chrX 9906935 9906966 4 86 0.0 2.0 1.0 2.0 109 chrX 9906857 intergenic not near genes chrX 9906912 intergenic not near genes chrX 9906966 intergenic not near genes chrX_4_9905001 chrX_9905001 RAL-837 2739 chrX 9906865 9906882 chrX 9906931 9906940 4 82 0.0 2.0 1.0 2.0 75 chrX 9906865 intergenic not near genes chrX 9906902 intergenic not near genes chrX 9906940 intergenic not near genes chrX_4_9905001 chrX_9905001 RAL-837 2740 chrX 10138198 10138247 chrX 10145719 10145771 412 9 7524 1.5 2.5 2.0 3.0 7573 chrX 10138198 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145771 intron,intron RhoU +,CR44894 - chrX_9_10140001 chrX_10140001 RAL-837 2741 chrX 10216828 10216852 chrX 10216929 10216933 7 97 6.5 4.5 5.5 1.1 105 chrX 10216828 3` UTR l(1)G0230 + chrX 10216880 3` UTR l(1)G0230 + chrX 10216933 3` UTR l(1)G0230 + chrX_7_10215001 chrX_10215001 RAL-837 2742 chrX 10248621 10248648 chrX 10248718 10248741 5 96 9.0 6.0 7.5 0.6 120 chrX 10248621 intron Hk - chrX 10248681 intron Hk - chrX 10248741 intron Hk - chrX_5_10245001 chrX_10245001 RAL-837 2743 chrX 10267297 10267328 chrX 10276452 10276498 roo 5 9166 1.5 2.5 2.0 1.7 9201 chrX 10267297 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276498 3` UTR alpha-Man-I - chrX_5_10270001 chrX_10270001 RAL-837 2744 chrX 10295239 10295284 chrX 10295658 10295703 8 419 2.0 4.0 3.0 2.0 464 chrX 10295239 intron alpha-Man-I - chrX 10295471 intron alpha-Man-I - chrX 10295703 intron alpha-Man-I - chrX_8_10295001 chrX_10295001 RAL-837 2745 chrX 10306045 10306079 chrX 10306146 10306159 8 96 4.0 0.0 2.0 2.7 114 chrX 10306045 intron alpha-Man-I - chrX 10306102 intron alpha-Man-I - chrX 10306159 intron alpha-Man-I - chrX_8_10305001 chrX_10305001 RAL-837 2746 chrX 10317550 10317582 chrX 10317633 10317680 6 96 1.0 0.5 0.8 3.3 130 chrX 10317550 intron alpha-Man-I - chrX 10317615 intron alpha-Man-I - chrX 10317680 intron alpha-Man-I - chrX_6_10315001 chrX_10315001 RAL-837 2747 chrX 10348799 10348824 chrX 10356367 10356396 springer 8 7579 3.0 3.5 3.2 1.9 7597 chrX 10348799 intergenic snoRNA:U3:9B + chrX 10352598 intergenic not near genes chrX 10356396 intergenic l(1)G0289 - chrX_8_10350001 chrX_10350001 RAL-837 2748 chrX 10361699 10361742 chrX 10361807 10361831 8 103 3.0 5.0 4.0 1.6 132 chrX 10361699 intron l(1)G0289 - chrX 10361765 intron l(1)G0289 - chrX 10361831 intron l(1)G0289 - chrX_8_10360001 chrX_10360001 RAL-837 2749 chrX 10525046 10525072 chrX 10532135 10532163 297 6 7088 6.0 7.5 6.8 0.8 7117 chrX 10525046 intron spri - chrX 10528604 intron spri - chrX 10532163 intron spri - chrX_6_10525001 chrX_10525001 RAL-837 2750 chrX 10550838 10550880 chrX 10552324 10552367 hobo 7 1485 2.0 3.0 2.5 2.0 1529 chrX 10550838 intron spri - chrX 10551602 intron spri - chrX 10552367 intron spri - chrX_7_10550001 chrX_10550001 RAL-837 2751 chrX 10686031 10686082 chrX 10691188 10691239 roo 14 5152 2.5 3.0 2.8 3.7 5208 chrX 10686031 intron X11Lbeta + chrX 10688635 intron X11Lbeta + chrX 10691239 intron X11Lbeta + chrX_14_10685001 chrX_10685001 RAL-837 2752 chrX 10772666 10772680 chrX 10772769 10772783 Tirant 4 102 4.5 3.0 3.8 0.8 117 chrX 10772666 intron CG15211 + chrX 10772724 intron CG15211 + chrX 10772783 intron CG15211 + chrX_4_10770001 chrX_10770001 RAL-837 2753 chrX 11142053 11142067 chrX 11142149 11142163 4 96 0.0 4.5 2.2 1.2 110 chrX 11142053 intergenic CG15199 -,CG15202 + chrX 11142108 intergenic CG15199 -,CG15202 + chrX 11142163 intergenic CG15199 -,CG15202 + chrX_4_11140001 chrX_11140001 RAL-837 2754 chrX 11184230 11184281 chrX 11189326 11189377 flea 10 5090 3.0 1.0 2.0 3.3 5147 chrX 11184230 intergenic not near genes chrX 11186804 intergenic not near genes chrX 11189377 intergenic not near genes chrX_10_11185001 chrX_11185001 RAL-837 2755 chrX 11254148 11254192 chrX 11254279 11254323 13 128 4.0 1.5 2.8 3.4 175 chrX 11254148 intron CG44422 - chrX 11254236 intron CG44422 - chrX 11254323 intron CG44422 - chrX_13_11250001 chrX_11250001 RAL-837 2756 chrX 11268583 11268593 chrX 11270061 11270091 hopper2 5 1493 1.5 2.0 1.8 1.8 1508 chrX 11268583 intron CG44422 - chrX 11269337 intron CG44422 - chrX 11270091 intron CG44422 - chrX_5_11265001 chrX_11265001 RAL-837 2757 chrX 11312040 11312089 chrX 11319413 11319435 Stalker2 9 7365 4.0 2.5 3.2 2.1 7395 chrX 11312040 intergenic not near genes chrX 11315738 intergenic not near genes chrX 11319435 intergenic not near genes chrX_9_11315001 chrX_11315001 RAL-837 2758 chrX 11535024 11535046 chrX 11541514 11541517 Burdock 4 6483 4.0 3.0 3.5 0.9 6493 chrX 11535024 intron Drak + chrX 11538270 intron Drak + chrX 11541517 intron Drak + chrX_4_11535001 chrX_11535001 RAL-837 2759 chrX 11633398 11633410 chrX 11640472 11640482 297 4 7072 9.5 3.5 6.5 0.5 7084 chrX 11633398 intron Ptp10D + chrX 11636940 intron Ptp10D + chrX 11640482 intron Ptp10D + chrX_4_11635001 chrX_11635001 RAL-837 2760 chrX 11633417 11633445 chrX 11640471 11640488 297 13 7066 2.5 3.5 3.0 3.2 7071 chrX 11633417 intron Ptp10D + chrX 11636952 intron Ptp10D + chrX 11640488 intron Ptp10D + chrX_13_11635001 chrX_11635001 RAL-837 2761 chrX 11645089 11645136 chrX 11648279 11648324 NOF 8 3187 1.5 4.0 2.8 2.1 3235 chrX 11645089 intron Ptp10D + chrX 11646706 intron Ptp10D + chrX 11648324 intron Ptp10D + chrX_8_11645001 chrX_11645001 RAL-837 2762 chrX 11661774 11661808 chrX 11661897 11661925 7 126 4.5 4.5 4.5 1.3 151 chrX 11661774 intron Ptp10D + chrX 11661850 intron Ptp10D + chrX 11661925 intron Ptp10D + chrX_7_11660001 chrX_11660001 RAL-837 2763 chrX 11719850 11719899 chrX 11719950 11719998 19 97 1.0 1.5 1.2 8.6 148 chrX 11719850 3` UTR prtp + chrX 11719924 intergenic prtp +,Tango10 + chrX 11719998 intergenic prtp +,Tango10 + chrX_19_11715001 chrX_11715001 RAL-837 2764 chrX 11761991 11762006 chrX 11762090 11762104 4 98 1.5 3.5 2.5 1.1 113 chrX 11761991 intron m + chrX 11762048 intron m + chrX 11762104 intron m + chrX_4_11760001 chrX_11760001 RAL-837 2765 chrX 11798998 11799037 chrX 11799104 11799143 11 101 3.0 6.0 4.5 2.0 145 chrX 11798998 intron CkIIbeta + chrX 11799070 intron CkIIbeta + chrX 11799143 intron CkIIbeta + chrX_11_11795001 chrX_11795001 RAL-837 2766 chrX 11818314 11818341 chrX 11818396 11818425 8 85 3.5 3.0 3.2 1.9 111 chrX 11818314 intron rudhira + chrX 11818370 intron rudhira + chrX 11818425 intron rudhira + chrX_8_11815001 chrX_11815001 RAL-837 2767 chrX 11922354 11922375 chrX 11922507 11922528 4 153 3.0 3.5 3.2 1.0 174 chrX 11922354 exon Sclp - chrX 11922441 intron Sclp - chrX 11922528 intron Sclp - chrX_4_11920001 chrX_11920001 RAL-837 2768 chrX 12019416 12019463 chrX 12019514 12019561 6 95 3.5 2.0 2.8 1.6 145 chrX 12019416 intron CG15735 + chrX 12019488 intron CG15735 + chrX 12019561 intron CG15735 + chrX_6_12015001 chrX_12015001 RAL-837 2769 chrX 12038071 12038098 chrX 12038284 12038312 5 210 5.5 1.5 3.5 1.1 241 chrX 12038071 intergenic not near genes chrX 12038192 intergenic not near genes chrX 12038312 intergenic not near genes chrX_5_12035001 chrX_12035001 RAL-837 2770 chrX 12038109 12038117 chrX 12038283 12038331 5 198 4.0 1.0 2.5 1.4 222 chrX 12038109 intergenic not near genes chrX 12038220 intergenic not near genes chrX 12038331 intergenic not near genes chrX_5_12035001 chrX_12035001 RAL-837 2771 chrX 12094043 12094065 chrX 12094128 12094128 8 90 2.0 2.5 2.2 2.5 85 chrX 12094043 intron,intron CR43960 +,Ten-a + chrX 12094086 intron,intron CR43960 +,Ten-a + chrX 12094128 intron,intron CR43960 +,Ten-a + chrX_8_12090001 chrX_12090001 RAL-837 2772 chrX 12136446 12136499 chrX 12136545 12136595 4 95 0.0 1.0 0.5 2.7 149 chrX 12136446 intron Ten-a + chrX 12136520 intron Ten-a + chrX 12136595 intron Ten-a + chrX_4_12135001 chrX_12135001 RAL-837 2773 chrX 12168115 12168150 chrX 12173577 12173612 I-element 10 5459 2.5 1.0 1.8 3.6 5497 chrX 12168115 intron Ten-a + chrX 12170864 intron Ten-a + chrX 12173612 intron Ten-a + chrX_10_12170001 chrX_12170001 RAL-837 2774 chrX 12392807 12392825 chrX 12392878 12392896 7 77 2.5 1.5 2.0 2.3 89 chrX 12392807 intergenic not near genes chrX 12392852 intergenic not near genes chrX 12392896 intergenic not near genes chrX_7_12390001 chrX_12390001 RAL-837 2775 chrX 12441192 12441213 chrX 12441313 12441334 7 119 4.0 7.0 5.5 1.1 142 chrX 12441192 intron Pkcdelta + chrX 12441263 intron Pkcdelta + chrX 12441334 intron Pkcdelta + chrX_7_12440001 chrX_12440001 RAL-837 2776 chrX 12442071 12442106 chrX 12442173 12442181 4 95 1.5 0.5 1.0 2.0 110 chrX 12442071 intron Pkcdelta + chrX 12442126 intron Pkcdelta + chrX 12442181 intron Pkcdelta + chrX_4_12440001 chrX_12440001 RAL-837 2777 chrX 12511339 12511344 chrX 12511423 12511448 4 94 0.0 2.0 1.0 2.0 109 chrX 12511339 intron CG2556 + chrX 12511394 intron CG2556 + chrX 12511448 intron CG2556 + chrX_4_12510001 chrX_12510001 RAL-837 2778 chrX 12528850 12528893 chrX 12528939 12528949 7 83 2.0 0.5 1.2 3.2 99 chrX 12528850 intron CG43921 - chrX 12528900 intron CG43921 - chrX 12528949 intron CG43921 - chrX_7_12525001 chrX_12525001 RAL-837 2779 chrX 12574109 12574156 chrX 12574208 12574238 7 91 1.5 4.5 3.0 1.8 129 chrX 12574109 intron CG11138 - chrX 12574174 intron CG11138 - chrX 12574238 intron CG11138 - chrX_7_12570001 chrX_12570001 RAL-837 2780 chrX 12785407 12785459 chrX 12785504 12785523 7 92 1.0 1.5 1.2 3.2 116 chrX 12785407 intergenic Pde9 -,CG32647 - chrX 12785465 intergenic Pde9 - chrX 12785523 intergenic Pde9 - chrX_7_12785001 chrX_12785001 RAL-837 2781 chrX 12815125 12815169 chrX 12815490 12815544 6 366 5.5 7.5 6.5 0.8 419 chrX 12815125 intron Pde9 - chrX 12815334 intron Pde9 - chrX 12815544 intron Pde9 - chrX_6_12815001 chrX_12815001 RAL-837 2782 chrX 12930578 12930606 chrX 12937714 12937740 HMS-Beagle 7 7131 5.0 5.5 5.2 1.1 7162 chrX 12930578 intron fne + chrX 12934159 intron fne + chrX 12937740 intron fne + chrX_7_12930001 chrX_12930001 RAL-837 2783 chrX 13146577 13146619 chrX 13146685 13146727 8 104 4.5 1.5 3.0 2.0 150 chrX 13146577 intron CG32645 + chrX 13146652 intron CG32645 + chrX 13146727 intron CG32645 + chrX_8_13145001 chrX_13145001 RAL-837 2784 chrX 13278139 13278170 chrX 13278242 13278243 7 97 5.5 2.5 4.0 1.4 104 chrX 13278139 intron HDAC4 - chrX 13278191 intron HDAC4 - chrX 13278243 intron HDAC4 - chrX_7_13275001 chrX_13275001 RAL-837 2785 chrX 13401466 13401514 chrX 13401838 13401886 jockey 14 369 2.0 4.5 3.2 3.3 420 chrX 13401466 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401886 3` UTR CG12725 - chrX_14_13400001 chrX_13400001 RAL-837 2786 chrX 13442123 13442166 chrX 13442234 13442277 7 94 0.0 2.0 1.0 3.5 154 chrX 13442123 intergenic not near genes chrX 13442200 intergenic not near genes chrX 13442277 intergenic not near genes chrX_7_13440001 chrX_13440001 RAL-837 2787 chrX 13463638 13463675 chrX 13469226 13469254 mdg3 10 5591 1.5 4.0 2.8 2.6 5616 chrX 13463638 intron Neto + chrX 13466446 intron Neto + chrX 13469254 intron Neto + chrX_10_13465001 chrX_13465001 RAL-837 2788 chrX 13577737 13577775 chrX 13577992 13578031 4 256 3.5 2.0 2.8 1.1 294 chrX 13577737 intron Tango13 + chrX 13577884 intron Tango13 + chrX 13578031 intron Tango13 + chrX_4_13575001 chrX_13575001 RAL-837 2789 chrX 13700119 13700150 chrX 13700226 13700255 10 105 2.5 5.0 3.8 2.1 136 chrX 13700119 intron,intron CG9940 -,NnaD + chrX 13700187 intron,intron CG9940 -,NnaD + chrX 13700255 intron,intron CG9940 -,NnaD + chrX_10_13700001 chrX_13700001 RAL-837 2790 chrX 13734075 13734108 chrX 13734191 13734219 5 115 4.0 6.0 5.0 0.8 144 chrX 13734075 intron g - chrX 13734147 intron g - chrX 13734219 intron g - chrX_5_13730001 chrX_13730001 RAL-837 2791 chrX 13796267 13796290 chrX 13799925 13799933 4 3650 11.0 16.5 13.8 0.3 3666 chrX 13796267 intron inaE + chrX 13798100 intron inaE + chrX 13799933 intron inaE + chrX_4_13795001 chrX_13795001 RAL-837 2792 chrX 13937958 13938005 chrX 13941249 13941251 I-element 10 3283 1.0 2.0 1.5 4.0 3293 chrX 13937958 intron mamo - chrX 13939604 intron mamo - chrX 13941251 intron mamo - chrX_10_13935001 chrX_13935001 RAL-837 2793 chrX 13057299 13057304 chrX 13966949 13966949 4 909647 5.0 7.5 6.2 0.6 909650 chrX 13057299 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_4_13510001 chrX_13510001 RAL-837 2794 chrX 14105011 14105056 chrX 14114172 14114189 roo 12 9164 3.5 2.0 2.8 3.2 9178 chrX 14105011 intergenic not near genes chrX 14109600 intergenic not near genes chrX 14114189 5` UTR CR44657 + chrX_12_14105001 chrX_14105001 RAL-837 2795 chrX 14157573 14157594 chrX 14163250 14163271 297 6 5677 6.0 2.0 4.0 1.2 5698 chrX 14157573 intergenic not near genes chrX 14160422 intergenic not near genes chrX 14163271 intergenic not near genes chrX_6_14160001 chrX_14160001 RAL-837 2796 chrX 14293847 14293879 chrX 14293942 14293984 10 100 2.5 1.5 2.0 3.3 137 chrX 14293847 intron CR44963 + chrX 14293916 5` UTR CR44963 + chrX 14293984 5` UTR CR44963 + chrX_10_14290001 chrX_14290001 RAL-837 2797 chrX 14416290 14416315 chrX 14421078 14421103 F-element 4 4788 4.0 1.0 2.5 1.1 4813 chrX 14416290 intron dpr8 + chrX 14418696 intron dpr8 + chrX 14421103 intron dpr8 + chrX_4_14415001 chrX_14415001 RAL-837 2798 chrX 14516197 14516223 chrX 14516285 14516324 9 98 1.0 2.5 1.8 3.2 127 chrX 14516197 intergenic not near genes chrX 14516260 intergenic not near genes chrX 14516324 intergenic not near genes chrX_9_14515001 chrX_14515001 RAL-837 2799 chrX 14636457 14636480 chrX 14641901 14641935 I-element 5 5445 4.0 2.0 3.0 1.2 5478 chrX 14636457 intron NetA - chrX 14639196 intron NetA - chrX 14641935 intron NetA - chrX_5_14635001 chrX_14635001 RAL-837 2800 chrX 14714032 14714063 chrX 14714134 14714165 4 102 3.0 3.0 3.0 1.0 133 chrX 14714032 intron NetB - chrX 14714098 intron NetB - chrX 14714165 intron NetB - chrX_4_14710001 chrX_14710001 RAL-837 2801 chrX 14767926 14767971 chrX 14768026 14768071 6 100 1.5 0.0 0.8 3.3 145 chrX 14767926 intergenic not near genes chrX 14767998 intergenic not near genes chrX 14768071 intergenic not near genes chrX_6_14765001 chrX_14765001 RAL-837 2802 chrX 14778015 14778054 chrX 14782832 14782871 Doc 6 4817 1.5 5.0 3.2 1.4 4856 chrX 14778015 intergenic CG5347 + chrX 14780443 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-837 2803 chrX 14818743 14818795 chrX 14823967 14824019 copia 13 5218 3.5 4.5 4.0 2.6 5276 chrX 14818743 intron rut - chrX 14821381 intron rut - chrX 14824019 intron rut - chrX_13_14820001 chrX_14820001 RAL-837 2804 chrX 14936845 14936887 chrX 14946116 14946163 roo 9 9276 4.5 3.0 3.8 1.9 9318 chrX 14936845 intron pdgy - chrX 14941504 intron pdgy - chrX 14946163 intron pdgy - chrX_9_14940001 chrX_14940001 RAL-837 2805 chrX 14968089 14968096 chrX 14968186 14968193 4 98 0.5 8.0 4.2 0.8 104 chrX 14968089 intron eag + chrX 14968141 intron eag + chrX 14968193 intron eag + chrX_4_14965001 chrX_14965001 RAL-837 2806 chrX 15200623 15200635 chrX 15200719 15200731 6 96 3.0 3.5 3.2 1.4 108 chrX 15200623 intergenic not near genes chrX 15200677 intergenic not near genes chrX 15200731 intergenic not near genes chrX_6_15200001 chrX_15200001 RAL-837 2807 chrX 15273690 15273731 chrX 15274877 15274918 1360 6 1184 2.5 2.5 2.5 1.7 1228 chrX 15273690 intergenic not near genes chrX 15274304 intergenic not near genes chrX 15274918 intergenic not near genes chrX_6_15270001 chrX_15270001 RAL-837 2808 chrX 15358314 15358343 chrX 15358404 15358440 4 93 3.0 3.0 3.0 1.0 126 chrX 15358314 intron acj6 - chrX 15358377 intron acj6 - chrX 15358440 intron acj6 - chrX_4_15355001 chrX_15355001 RAL-837 2809 chrX 15413040 15413076 chrX 15417354 15417366 Juan 4 4301 4.0 3.5 3.8 0.8 4326 chrX 15413040 intron Cngl - chrX 15415203 intron Cngl - chrX 15417366 intron Cngl - chrX_4_15415001 chrX_15415001 RAL-837 2810 chrX 15426172 15426196 chrX 15426288 15426312 5 115 2.5 4.0 3.2 1.2 140 chrX 15426172 intron Cngl - chrX 15426242 intron Cngl - chrX 15426312 intron Cngl - chrX_5_15425001 chrX_15425001 RAL-837 2811 chrX 15529252 15529286 chrX 15529347 15529376 9 98 3.0 2.0 2.5 2.6 124 chrX 15529252 intron Ac13E - chrX 15529314 intron Ac13E - chrX 15529376 intron Ac13E - chrX_9_15525001 chrX_15525001 RAL-837 2812 chrX 15561946 15561963 chrX 15562046 15562063 4 96 0.5 2.0 1.2 1.8 117 chrX 15561946 intergenic not near genes chrX 15562004 intergenic not near genes chrX 15562063 intergenic not near genes chrX_4_15560001 chrX_15560001 RAL-837 2813 chrX 15565616 15565660 chrX 15565722 15565733 7 101 2.5 3.5 3.0 1.8 117 chrX 15565616 intergenic not near genes chrX 15565674 intergenic not near genes chrX 15565733 intergenic not near genes chrX_7_15565001 chrX_15565001 RAL-837 2814 chrX 15589445 15589457 chrX 15589639 15589640 4 194 4.0 7.5 5.8 0.6 195 chrX 15589445 intron CG9220 - chrX 15589542 intron CG9220 - chrX 15589640 exon CG9220 - chrX_4_15585001 chrX_15585001 RAL-837 2815 chrX 15659371 15659404 chrX 15659460 15659484 6 94 3.0 1.0 2.0 2.0 113 chrX 15659371 intergenic not near genes chrX 15659428 intergenic not near genes chrX 15659484 intergenic not near genes chrX_6_15655001 chrX_15655001 RAL-837 2816 chrX 15671176 15671210 chrX 15671283 15671300 6 103 2.0 0.0 1.0 3.0 124 chrX 15671176 intergenic CG15646 - chrX 15671238 intergenic CG15646 - chrX 15671300 intergenic CG15646 - chrX_6_15670001 chrX_15670001 RAL-837 2817 chrX 15678017 15678068 chrX 15678115 15678165 6 92 2.0 3.5 2.8 1.6 148 chrX 15678017 intergenic CG12708 + chrX 15678091 intergenic CG12708 + chrX 15678165 intergenic CG12708 + chrX_6_15675001 chrX_15675001 RAL-837 2818 chrX 16111796 16111849 chrX 16111905 16111951 13 106 2.0 1.5 1.8 4.6 155 chrX 16111796 intergenic not near genes chrX 16111874 intergenic not near genes chrX 16111951 intergenic not near genes chrX_13_16110001 chrX_16110001 RAL-837 2819 chrX 16156109 16156162 chrX 16156205 16156218 5 88 3.5 9.5 6.5 0.7 109 chrX 16156109 intergenic not near genes chrX 16156164 intergenic not near genes chrX 16156218 intergenic not near genes chrX_5_16155001 chrX_16155001 RAL-837 2820 chrX 16222760 16222798 chrX 16231130 16231168 roo 7 8369 1.5 1.5 1.5 2.8 8408 chrX 16222760 intergenic not near genes chrX 16226964 intergenic not near genes chrX 16231168 intergenic not near genes chrX_7_16225001 chrX_16225001 RAL-837 2821 chrX 16295510 16295529 chrX 16295614 16295633 6 102 4.0 0.0 2.0 2.0 123 chrX 16295510 intron CG9911 - chrX 16295572 intron CG9911 - chrX 16295633 intron CG9911 - chrX_6_16295001 chrX_16295001 RAL-837 2822 chrX 16340650 16340676 chrX 16349827 16349853 roo 8 9176 6.0 3.0 4.5 1.5 9203 chrX 16340650 intergenic Dsp1 + chrX 16345252 intergenic not near genes chrX 16349853 intergenic sl + chrX_8_16345001 chrX_16345001 RAL-837 2823 chrX 16340685 16340688 chrX 16349823 16349864 roo 4 9161 5.0 2.5 3.8 0.8 9179 chrX 16340685 intergenic Dsp1 + chrX 16345274 intergenic not near genes chrX 16349864 intergenic sl + chrX_4_16345001 chrX_16345001 RAL-837 2824 chrX 16492632 16492669 chrX 16498223 16498266 mdg3 12 5595 8.0 3.0 5.5 1.8 5634 chrX 16492632 intron para - chrX 16495449 intron para - chrX 16498266 intron para - chrX_12_16495001 chrX_16495001 RAL-837 2825 chrX 16519920 16519960 chrX 16520026 16520066 6 104 4.5 7.0 5.8 0.9 146 chrX 16519920 intron para - chrX 16519993 intron para - chrX 16520066 intron para - chrX_6_16515001 chrX_16515001 RAL-837 2826 chrX 16841395 16841421 chrX 16841484 16841514 4 90 1.5 2.0 1.8 1.4 119 chrX 16841395 exon RSG7 - chrX 16841454 intron RSG7 - chrX 16841514 intron RSG7 - chrX_4_16840001 chrX_16840001 RAL-837 2827 chrX 16906650 16906654 chrX 16906752 16906761 4 104 6.5 3.5 5.0 0.7 111 chrX 16906650 intron CR44754 - chrX 16906706 intron CR44754 - chrX 16906761 intron CR44754 - chrX_4_16905001 chrX_16905001 RAL-837 2828 chrX 16906661 16906678 chrX 16906748 16906776 7 97 4.0 3.0 3.5 1.6 115 chrX 16906661 intron CR44754 - chrX 16906718 intron CR44754 - chrX 16906776 intron CR44754 - chrX_7_16905001 chrX_16905001 RAL-837 2829 chrX 16935990 16936034 chrX 16936428 16936458 jockey 4 430 2.5 2.5 2.5 1.1 468 chrX 16935990 intron CG4928 + chrX 16936224 intron CG4928 + chrX 16936458 intron CG4928 + chrX_4_16935001 chrX_16935001 RAL-837 2830 chrX 16951300 16951336 chrX 16951400 16951435 5 99 4.0 2.0 3.0 1.2 135 chrX 16951300 exon RhoGAP15B + chrX 16951368 exon RhoGAP15B + chrX 16951435 exon RhoGAP15B + chrX_5_16950001 chrX_16950001 RAL-837 2831 chrX 16965510 16965557 chrX 16965625 16965672 11 112 4.5 2.5 3.5 2.4 162 chrX 16965510 intron CG9086 - chrX 16965591 intron CG9086 - chrX 16965672 intron CG9086 - chrX_11_16965001 chrX_16965001 RAL-837 2832 chrX 1053117 1053123 chrX 16983076 16983076 4 15929955 10.5 5.0 7.8 0.5 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-837 2833 chrX 17011953 17011999 chrX 17012056 17012091 9 93 1.5 4.5 3.0 2.2 138 chrX 17011953 intron CG45002 - chrX 17012022 intron CG45002 - chrX 17012091 intron CG45002 - chrX_9_17010001 chrX_17010001 RAL-837 2834 chrX 17057935 17057959 chrX 17058196 17058203 pogo 6 255 2.0 5.0 3.5 1.3 268 chrX 17057935 intron CG45002 - chrX 17058069 intron CG45002 - chrX 17058203 intron CG45002 - chrX_6_17055001 chrX_17055001 RAL-837 2835 chrX 17061548 17061596 chrX 17061691 17061739 9 133 3.5 3.0 3.2 2.1 191 chrX 17061548 intron CG45002 - chrX 17061644 intron CG45002 - chrX 17061739 intron CG45002 - chrX_9_17060001 chrX_17060001 RAL-837 2836 chrX 17110302 17110334 chrX 17110444 17110476 4 141 0.0 4.0 2.0 1.3 174 chrX 17110302 intron CG5004 + chrX 17110389 intron CG5004 + chrX 17110476 intron CG5004 + chrX_4_17110001 chrX_17110001 RAL-837 2837 chrX 17179566 17179613 chrX 17179684 17179720 8 110 4.0 2.0 3.0 2.0 154 chrX 17179566 intron baz + chrX 17179643 intron baz + chrX 17179720 intron baz + chrX_8_17175001 chrX_17175001 RAL-837 2838 chrX 17205836 17205856 chrX 17205946 17205966 8 110 2.0 4.5 3.2 1.9 130 chrX 17205836 intergenic not near genes chrX 17205901 intergenic not near genes chrX 17205966 intergenic CG32564 + chrX_8_17205001 chrX_17205001 RAL-837 2839 chrX 17211441 17211479 chrX 17212141 17212162 7 690 16.0 12.0 14.0 0.5 721 chrX 17211441 intergenic not near genes chrX 17211802 intergenic not near genes chrX 17212162 intergenic CG18258 + chrX_7_17210001 chrX_17210001 RAL-837 2840 chrX 17290053 17290074 chrX 17290149 17290170 6 96 4.5 3.5 4.0 1.2 117 chrX 17290053 intron,intron CG5445 +,Fim - chrX 17290112 intron,intron CG5445 +,Fim - chrX 17290170 intron,intron CG5445 +,Fim - chrX_6_17290001 chrX_17290001 RAL-837 2841 chrX 17290077 17290097 chrX 17290148 17290193 8 87 2.5 3.5 3.0 2.0 116 chrX 17290077 intron,intron CG5445 +,Fim - chrX 17290135 intron,intron CG5445 +,Fim - chrX 17290193 intron,intron CG5445 +,Fim - chrX_8_17290001 chrX_17290001 RAL-837 2842 chrX 17316363 17316385 chrX 17316450 17316489 6 99 6.0 0.0 3.0 1.5 126 chrX 17316363 intron B-H2 + chrX 17316426 intron B-H2 + chrX 17316489 intron B-H2 + chrX_6_17315001 chrX_17315001 RAL-837 2843 chrX 17335680 17335716 chrX 17335792 17335828 6 112 3.5 7.0 5.2 1.0 148 chrX 17335680 intergenic not near genes chrX 17335754 intergenic not near genes chrX 17335828 intergenic not near genes chrX_6_17335001 chrX_17335001 RAL-837 2844 chrX 17352578 17352623 chrX 17352692 17352701 8 107 0.0 2.5 1.2 3.6 123 chrX 17352578 intergenic not near genes chrX 17352640 intergenic not near genes chrX 17352701 intergenic not near genes chrX_8_17350001 chrX_17350001 RAL-837 2845 chrX 17430732 17430770 chrX 17431108 17431111 7 370 4.5 3.5 4.0 1.4 379 chrX 17430732 intron CG12994 - chrX 17430922 intron CG12994 - chrX 17431111 intron CG12994 - chrX_7_17430001 chrX_17430001 RAL-837 2846 chrX 17502350 17502370 chrX 17502430 17502453 4 89 2.0 3.0 2.5 1.1 103 chrX 17502350 intron CG43658 - chrX 17502402 intron CG43658 - chrX 17502453 intron CG43658 - chrX_4_17500001 chrX_17500001 RAL-837 2847 chrX 17545010 17545040 chrX 17545091 17545115 9 94 2.0 2.0 2.0 3.0 105 chrX 17545010 intron CG43658 - chrX 17545062 intron CG43658 - chrX 17545115 intron CG43658 - chrX_9_17545001 chrX_17545001 RAL-837 2848 chrX 17680878 17680920 chrX 17680975 17681017 12 96 3.0 4.5 3.8 2.5 139 chrX 17680878 intron chas - chrX 17680948 intron chas - chrX 17681017 intron chas - chrX_12_17680001 chrX_17680001 RAL-837 2849 chrX 17708816 17708856 chrX 17708913 17708955 7 97 2.0 5.5 3.8 1.5 139 chrX 17708816 intron CG8173 - chrX 17708886 intron CG8173 - chrX 17708955 intron CG8173 - chrX_7_17705001 chrX_17705001 RAL-837 2850 chrX 17716594 17716602 chrX 17716672 17716709 4 98 2.5 2.5 2.5 1.1 115 chrX 17716594 intron CG42684 + chrX 17716652 intron CG42684 + chrX 17716709 intron CG42684 + chrX_4_17715001 chrX_17715001 RAL-837 2851 chrX 17792935 17792978 chrX 17796253 17796274 flea 4 3312 2.0 4.0 3.0 1.0 3339 chrX 17792935 intron OdsH + chrX 17794604 intron OdsH + chrX 17796274 intron OdsH + chrX_4_17790001 chrX_17790001 RAL-837 2852 chrX 17911835 17911876 chrX 17911942 17911978 5 105 0.0 4.0 2.0 1.7 143 chrX 17911835 intron CG6847 + chrX 17911906 intron CG6847 + chrX 17911978 intron CG6847 + chrX_5_17910001 chrX_17910001 RAL-837 2853 chrX 17968873 17968929 chrX 17969012 17969067 8 138 2.0 2.5 2.2 2.5 194 chrX 17968873 intron Sh - chrX 17968970 intron Sh - chrX 17969067 intron Sh - chrX_8_17965001 chrX_17965001 RAL-837 2854 chrX 18029176 18029190 chrX 18029277 18029291 6 101 2.0 0.0 1.0 3.0 115 chrX 18029176 intron Sh - chrX 18029234 intron Sh - chrX 18029291 intron Sh - chrX_6_18025001 chrX_18025001 RAL-837 2855 chrX 18040424 18040447 chrX 18040529 18040555 4 107 2.5 3.5 3.0 1.0 131 chrX 18040424 intron Sh - chrX 18040490 intron Sh - chrX 18040555 intron Sh - chrX_4_18040001 chrX_18040001 RAL-837 2856 chrX 18126580 18126821 chrX 18126722 18126884 16 132 5.0 1.5 3.2 3.8 304 chrX 18126580 intron CG32553 - chrX 18126732 intron CG32553 - chrX 18126884 5` UTR CG32553 - chrX_16_18125001 chrX_18125001 RAL-837 2857 chrX 18194047 18194098 chrX 18194602 18194653 BS 7 555 2.5 1.0 1.8 2.5 606 chrX 18194047 intron Frq2 + chrX 18194350 intron Frq2 + chrX 18194653 intron Frq2 + chrX_7_18190001 chrX_18190001 RAL-837 2858 chrX 18429479 18429516 chrX 18434810 18434840 Transpac 8 5330 2.5 1.5 2.0 2.7 5361 chrX 18429479 intergenic not near genes chrX 18432160 intergenic not near genes chrX 18434840 intergenic not near genes chrX_8_18430001 chrX_18430001 RAL-837 2859 chrX 18490039 18490057 chrX 18490214 18490232 4 175 2.0 2.5 2.2 1.2 193 chrX 18490039 intergenic CG15046 - chrX 18490136 intergenic not near genes chrX 18490232 intergenic not near genes chrX_4_18490001 chrX_18490001 RAL-837 2860 chrX 18558764 18558807 chrX 18558866 18558909 8 96 0.5 1.5 1.0 4.0 145 chrX 18558764 intron Bx + chrX 18558836 intron Bx + chrX 18558909 intron Bx + chrX_8_18555001 chrX_18555001 RAL-837 2861 chrX 12946234 12946235 chrX 18572525 18572526 6 5626291 16.0 8.5 12.2 0.5 5626292 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_6_15755001 chrX_15755001 RAL-837 2862 chrX 18645021 18645048 chrX 18645112 18645130 9 108 3.0 4.5 3.8 1.9 109 chrX 18645021 intron Rip11 - chrX 18645076 intron Rip11 - chrX 18645130 intron Rip11 - chrX_9_18645001 chrX_18645001 RAL-837 2863 chrX 18662436 18662453 chrX 18662533 18662568 4 106 2.0 4.5 3.2 1.0 132 chrX 18662436 intergenic CG6696 - chrX 18662502 intergenic CG6696 - chrX 18662568 intergenic CG6696 - chrX_4_18660001 chrX_18660001 RAL-837 2864 chrX 18698838 18698878 chrX 18698975 18699015 5 136 3.0 4.5 3.8 1.0 177 chrX 18698838 intergenic not near genes chrX 18698926 intergenic not near genes chrX 18699015 intergenic not near genes chrX_5_18695001 chrX_18695001 RAL-837 2865 chrX 18754334 18754343 chrX 18758019 18758030 297 4 3686 4.0 3.5 3.8 0.8 3696 chrX 18754334 intergenic not near genes chrX 18756182 intergenic not near genes chrX 18758030 intergenic not near genes chrX_4_18755001 chrX_18755001 RAL-837 2866 chrX 18774428 18774467 chrX 18774533 18774572 8 99 3.0 0.5 1.8 2.9 144 chrX 18774428 intergenic CCKLR-17D3 - chrX 18774500 intergenic CCKLR-17D3 - chrX 18774572 intergenic not near genes chrX_8_18770001 chrX_18770001 RAL-837 2867 chrX 18896501 18896546 chrX 18896632 18896677 9 127 1.5 4.0 2.8 2.4 176 chrX 18896501 3` UTR CG7349 + chrX 18896589 intergenic CG7349 + chrX 18896677 intergenic CG7349 + chrX_9_18895001 chrX_18895001 RAL-837 2868 chrX 18896895 18896935 chrX 18896987 18897006 7 90 3.5 3.0 3.2 1.7 111 chrX 18896895 intergenic CG7349 + chrX 18896950 intergenic CG7349 + chrX 18897006 intergenic CG7349 + chrX_7_18895001 chrX_18895001 RAL-837 2869 chrX 18957049 18957100 chrX 18965732 18965755 roo 9 8677 3.5 4.5 4.0 1.8 8706 chrX 18957049 intron CG43759 + chrX 18961402 intron CG43759 + chrX 18965755 intron CG43759 + chrX_9_18960001 chrX_18960001 RAL-837 2870 chrX 19014349 19014392 chrX 19014443 19014452 11 86 4.0 3.0 3.5 2.4 103 chrX 19014349 intron CG43759 + chrX 19014400 intron CG43759 + chrX 19014452 intron CG43759 + chrX_11_19010001 chrX_19010001 RAL-837 2871 chrX 19060414 19060437 chrX 19065203 19065241 Doc 4 4800 3.0 4.0 3.5 0.9 4827 chrX 19060414 intron CG14190 + chrX 19062828 intron CG14190 + chrX 19065241 intron CG14190 + chrX_4_19060001 chrX_19060001 RAL-837 2872 chrX 19073665 19073682 chrX 19073772 19073789 4 107 6.5 2.5 4.5 0.7 124 chrX 19073665 intergenic not near genes chrX 19073727 intergenic not near genes chrX 19073789 intergenic not near genes chrX_4_19070001 chrX_19070001 RAL-837 2873 chrX 19098752 19098776 chrX 19098850 19098874 6 96 2.5 2.0 2.2 1.9 122 chrX 19098752 intergenic not near genes chrX 19098813 intergenic not near genes chrX 19098874 intergenic not near genes chrX_6_19095001 chrX_19095001 RAL-837 2874 chrX 19109113 19109137 chrX 19109306 19109341 7 198 0.0 4.5 2.2 2.2 228 chrX 19109113 intergenic not near genes chrX 19109227 intergenic not near genes chrX 19109341 intergenic not near genes chrX_7_19105001 chrX_19105001 RAL-837 2875 chrX 19125674 19125693 chrX 19125778 19125797 4 104 3.0 5.0 4.0 0.8 123 chrX 19125674 intron tgy - chrX 19125736 intron tgy - chrX 19125797 intron tgy - chrX_4_19125001 chrX_19125001 RAL-837 2876 chrX 19136532 19136580 chrX 19143472 19143507 412 8 6931 2.5 1.0 1.8 2.9 6975 chrX 19136532 intergenic not near genes chrX 19140020 intergenic not near genes chrX 19143507 3` UTR RhoGAP18B - chrX_8_19140001 chrX_19140001 RAL-837 2877 chrX 19157778 19157792 chrX 19157878 19157918 5 117 1.0 4.0 2.5 1.4 140 chrX 19157778 intron RhoGAP18B - chrX 19157848 intron RhoGAP18B - chrX 19157918 intron RhoGAP18B - chrX_5_19155001 chrX_19155001 RAL-837 2878 chrX 19182000 19182043 chrX 19182127 19182162 4 128 4.5 2.0 3.2 1.0 162 chrX 19182000 3` UTR CG7453 + chrX 19182081 intergenic CG7453 + chrX 19182162 intergenic CG7453 + chrX_4_19180001 chrX_19180001 RAL-837 2879 chrX 19187525 19187542 chrX 19187619 19187631 4 96 3.5 2.5 3.0 1.0 106 chrX 19187525 intergenic CG33253 + chrX 19187578 intergenic CG33253 +,Mec2 + chrX 19187631 intergenic CG33253 +,Mec2 + chrX_4_19185001 chrX_19185001 RAL-837 2880 chrX 19280999 19281013 chrX 19281148 19281162 4 149 0.0 2.0 1.0 2.0 163 chrX 19280999 intergenic CG8034 - chrX 19281080 intergenic CG8034 - chrX 19281162 intergenic CG8034 - chrX_4_19280001 chrX_19280001 RAL-837 2881 chrX 19309644 19309668 chrX 19309744 19309767 5 95 5.5 3.5 4.5 0.9 123 chrX 19309644 intergenic not near genes chrX 19309706 intergenic not near genes chrX 19309767 intergenic not near genes chrX_5_19305001 chrX_19305001 RAL-837 2882 chrX 19309672 19309682 chrX 19309739 19309782 4 84 4.0 2.5 3.2 1.0 110 chrX 19309672 intergenic not near genes chrX 19309727 intergenic not near genes chrX 19309782 intergenic not near genes chrX_4_19305001 chrX_19305001 RAL-837 2883 chrX 19330448 19330462 chrX 19330588 19330602 5 140 5.0 1.5 3.2 1.2 154 chrX 19330448 intron nAChRalpha7 - chrX 19330525 intron nAChRalpha7 - chrX 19330602 intron nAChRalpha7 - chrX_5_19330001 chrX_19330001 RAL-837 2884 chrX 19330466 19330471 chrX 19330581 19330596 4 118 5.0 1.5 3.2 1.0 130 chrX 19330466 intron nAChRalpha7 - chrX 19330531 intron nAChRalpha7 - chrX 19330596 intron nAChRalpha7 - chrX_4_19330001 chrX_19330001 RAL-837 2885 chrX 19339736 19339764 chrX 19339832 19339860 8 93 2.5 4.5 3.5 1.8 124 chrX 19339736 intron nAChRalpha7 - chrX 19339798 intron nAChRalpha7 - chrX 19339860 intron nAChRalpha7 - chrX_8_19335001 chrX_19335001 RAL-837 2886 chrX 19380142 19380180 chrX 19380403 19380441 pogo 7 258 3.0 1.5 2.2 2.2 299 chrX 19380142 intron kek5 + chrX 19380292 intron kek5 + chrX 19380441 intron kek5 + chrX_7_19380001 chrX_19380001 RAL-837 2887 chrX 19430519 19430555 chrX 19430637 19430673 11 116 2.0 2.5 2.2 3.4 154 chrX 19430519 intron kek5 + chrX 19430596 intron kek5 + chrX 19430673 intron kek5 + chrX_11_19430001 chrX_19430001 RAL-837 2888 chrX 19460001 19460028 chrX 19460109 19460130 6 107 0.0 4.0 2.0 2.0 129 chrX 19460001 intron kek5 + chrX 19460066 intron kek5 + chrX 19460130 intron kek5 + chrX_6_19460001 chrX_19460001 RAL-837 2889 chrX 19542114 19542166 chrX 19542232 19542284 4 118 2.0 2.5 2.2 1.2 170 chrX 19542114 intron CG32532 - chrX 19542199 intron CG32532 - chrX 19542284 intron CG32532 - chrX_4_19540001 chrX_19540001 RAL-837 2890 chrX 19593933 19593966 chrX 19594038 19594068 8 101 2.5 3.5 3.0 2.0 135 chrX 19593933 exon CG14205 + chrX 19594000 intron CG14205 + chrX 19594068 intron CG14205 + chrX_8_19590001 chrX_19590001 RAL-837 2891 chrX 19647068 19647081 chrX 19647145 19647185 6 96 4.5 4.0 4.2 1.2 117 chrX 19647068 3` UTR Ranbp21 - chrX 19647126 3` UTR Ranbp21 - chrX 19647185 3` UTR Ranbp21 - chrX_6_19645001 chrX_19645001 RAL-837 2892 chrX 19662011 19662056 chrX 19662254 19662299 7 242 4.5 3.0 3.8 1.5 288 chrX 19662011 intron CG14223 - chrX 19662155 intron CG14223 - chrX 19662299 intron CG14223 - chrX_7_19660001 chrX_19660001 RAL-837 2893 chrX 19674188 19674238 chrX 19674291 19674341 7 97 4.5 3.0 3.8 1.5 153 chrX 19674188 intron et - chrX 19674264 intron et - chrX 19674341 intron et - chrX_7_19670001 chrX_19670001 RAL-837 2894 chrX 19710051 19710092 chrX 19711857 19711877 S-element 5 1788 1.5 2.5 2.0 1.7 1826 chrX 19710051 intron meso18E - chrX 19710964 intron meso18E - chrX 19711877 intron meso18E - chrX_5_19710001 chrX_19710001 RAL-837 2895 chrX 19762568 19762612 chrX 19762668 19762687 8 97 4.0 5.0 4.5 1.5 119 chrX 19762568 5` UTR CG12702 - chrX 19762628 5` UTR CG12702 - chrX 19762687 5` UTR CG12702 - chrX_8_19760001 chrX_19760001 RAL-837 2896 chrX 19822847 19822859 chrX 19822994 19823013 5 164 3.0 2.5 2.8 1.3 166 chrX 19822847 intergenic not near genes chrX 19822930 intergenic skpE - chrX 19823013 intergenic skpE - chrX_5_19820001 chrX_19820001 RAL-837 2897 chrX 20041530 20041554 chrX 20041630 20041644 5 98 2.5 3.0 2.8 1.3 114 chrX 20041530 intron Dop2R - chrX 20041587 intron Dop2R - chrX 20041644 intron Dop2R - chrX_5_20040001 chrX_20040001 RAL-837 2898 chrX 20065803 20065816 chrX 20065902 20065915 6 99 8.0 6.0 7.0 0.8 112 chrX 20065803 intergenic not near genes chrX 20065859 intergenic not near genes chrX 20065915 intergenic not near genes chrX_6_20065001 chrX_20065001 RAL-837 2899 chrX 20065817 20065832 chrX 20065889 20065911 5 89 5.0 4.5 4.8 0.9 94 chrX 20065817 intergenic not near genes chrX 20065864 intergenic not near genes chrX 20065911 intergenic not near genes chrX_5_20065001 chrX_20065001 RAL-837 2900 chrX 20125378 20125397 chrX 20125480 20125493 6 101 0.0 6.0 3.0 1.5 115 chrX 20125378 intergenic CG34331 + chrX 20125436 intergenic CG34331 + chrX 20125493 intergenic CG34331 + chrX_6_20125001 chrX_20125001 RAL-837 2901 chrX 20144297 20144315 chrX 20144397 20144409 8 97 2.5 3.0 2.8 2.1 112 chrX 20144297 intergenic not near genes chrX 20144353 intergenic not near genes chrX 20144409 intergenic not near genes chrX_8_20140001 chrX_20140001 RAL-837 2902 chrX 20312864 20312909 chrX 20312962 20312982 15 95 2.0 4.5 3.2 3.6 118 chrX 20312864 intron CG1504 - chrX 20312923 intron CG1504 - chrX 20312982 intron CG1504 - chrX_15_20310001 chrX_20310001 RAL-837 2903 chrX 20320280 20320303 chrX 20320377 20320400 6 97 1.5 1.0 1.2 2.7 120 chrX 20320280 intron CG1504 - chrX 20320340 intron CG1504 - chrX 20320400 intron CG1504 - chrX_6_20320001 chrX_20320001 RAL-837 2904 chrX 20322241 20322277 chrX 20322328 20322363 17 94 2.5 4.5 3.5 3.8 122 chrX 20322241 intron CG1504 - chrX 20322302 intron CG1504 - chrX 20322363 intron CG1504 - chrX_17_20320001 chrX_20320001 RAL-837 2905 chrX 20374071 20374125 chrX 20374167 20374221 9 94 2.5 3.5 3.0 2.2 150 chrX 20374071 intergenic not near genes chrX 20374146 intergenic not near genes chrX 20374221 intergenic not near genes chrX_9_20370001 chrX_20370001 RAL-837 2906 chrX 20443164 20443205 chrX 20443248 20443301 6 94 2.5 2.5 2.5 1.7 137 chrX 20443164 exon CG1695 + chrX 20443232 intron CG1695 + chrX 20443301 intron CG1695 + chrX_6_20440001 chrX_20440001 RAL-837 2907 chrX 20456640 20456683 chrX 20456756 20456805 9 120 2.5 0.5 1.5 3.6 165 chrX 20456640 intron CG32506 + chrX 20456722 intron CG32506 + chrX 20456805 intron CG32506 + chrX_9_20455001 chrX_20455001 RAL-837 2908 chrX 20467999 20468039 chrX 20468103 20468132 12 106 4.5 0.5 2.5 3.4 133 chrX 20467999 intron GstT3 + chrX 20468066 intron GstT3 + chrX 20468132 intron GstT3 + chrX_12_20465001 chrX_20465001 RAL-837 2909 chrX 20499139 20499156 chrX 20499242 20499259 6 103 11.0 4.0 7.5 0.7 120 chrX 20499139 intron RhoGAP19D - chrX 20499199 intron RhoGAP19D - chrX 20499259 intron RhoGAP19D - chrX_6_20495001 chrX_20495001 RAL-837 2910 chrX 20499172 20499187 chrX 20499237 20499290 9 84 4.5 3.5 4.0 1.8 118 chrX 20499172 intron RhoGAP19D - chrX 20499231 intron RhoGAP19D - chrX 20499290 intron RhoGAP19D - chrX_9_20495001 chrX_20495001 RAL-837 2911 chrX 20504114 20504145 chrX 20505655 20505686 transib2 7 1541 8.5 3.5 6.0 1.0 1572 chrX 20504114 intron RhoGAP19D - chrX 20504900 intron RhoGAP19D - chrX 20505686 intron RhoGAP19D - chrX_7_20500001 chrX_20500001 RAL-837 2912 chrX 20517225 20517256 chrX 20517331 20517350 8 100 4.0 0.5 2.2 2.5 125 chrX 20517225 intron Tak1 - chrX 20517288 intron Tak1 - chrX 20517350 intron Tak1 - chrX_8_20515001 chrX_20515001 RAL-837 2913 chrX 20526456 20526470 chrX 20526592 20526606 5 135 0.5 0.5 0.5 3.3 150 chrX 20526456 intergenic not near genes chrX 20526531 intergenic not near genes chrX 20526606 intergenic not near genes chrX_5_20525001 chrX_20525001 RAL-837 2914 chrX 20546537 20546568 chrX 20546717 20546754 11 183 4.5 2.0 3.2 2.6 217 chrX 20546537 intron RunxB + chrX 20546646 intron RunxB + chrX 20546754 intron RunxB + chrX_11_20545001 chrX_20545001 RAL-837 2915 chrX 20560232 20560286 chrX 20560352 20560406 11 118 4.0 3.5 3.8 2.3 174 chrX 20560232 intron RunxB + chrX 20560319 intron RunxB + chrX 20560406 intron RunxB + chrX_11_20560001 chrX_20560001 RAL-837 2916 chrX 20570778 20570792 chrX 20570868 20570897 5 94 4.0 5.0 4.5 0.9 119 chrX 20570778 intergenic not near genes chrX 20570838 intergenic not near genes chrX 20570897 intergenic not near genes chrX_5_20570001 chrX_20570001 RAL-837 2917 chrX 20635416 20635445 chrX 20635602 20635631 7 184 0.5 4.5 2.5 2.0 215 chrX 20635416 intergenic not near genes chrX 20635524 intergenic not near genes chrX 20635631 intergenic not near genes chrX_7_20635001 chrX_20635001 RAL-837 2918 chrX 20704178 20704184 chrX 20704435 20704454 4 272 0.5 3.0 1.8 1.4 276 chrX 20704178 intergenic not near genes chrX 20704316 intergenic not near genes chrX 20704454 intergenic not near genes chrX_4_20700001 chrX_20700001 RAL-837 2919 chrX 20710421 20710441 chrX 20710511 20710537 7 95 2.0 3.0 2.5 2.0 116 chrX 20710421 intergenic not near genes chrX 20710479 intergenic not near genes chrX 20710537 intergenic not near genes chrX_7_20710001 chrX_20710001 RAL-837 2920 chrX 20719178 20719193 chrX 20719531 20719533 5 349 2.5 4.5 3.5 1.1 355 chrX 20719178 intergenic not near genes chrX 20719356 intergenic not near genes chrX 20719533 intergenic not near genes chrX_5_20715001 chrX_20715001 RAL-837 2921 chrX 20836708 20836746 chrX 20844330 20844368 roo 6 7621 3.0 6.0 4.5 1.1 7660 chrX 20836708 intron shakB - chrX 20840538 intron shakB - chrX 20844368 intron shakB - chrX_6_20840001 chrX_20840001 RAL-837 2922 chrX 20874796 20874827 chrX 20874902 20874934 6 104 3.0 3.5 3.2 1.4 138 chrX 20874796 intron shakB - chrX 20874865 intron shakB - chrX 20874934 intron shakB - chrX_6_20870001 chrX_20870001 RAL-837 2923 chrX 20940700 20940740 chrX 20942189 20942229 hobo 7 1485 3.0 2.0 2.5 2.0 1529 chrX 20940700 intergenic not near genes chrX 20941464 intergenic not near genes chrX 20942229 intergenic not near genes chrX_7_20940001 chrX_20940001 RAL-837 2924 chrX 20956976 20956992 chrX 20962438 20962454 I-element 5 5461 9.5 6.0 7.8 0.6 5478 chrX 20956976 intergenic not near genes chrX 20959715 intergenic not near genes chrX 20962454 intergenic Ser6 - chrX_5_20955001 chrX_20955001 RAL-837 2925 chrX 21055684 21055720 chrX 21055780 21055816 12 93 2.0 2.0 2.0 4.0 132 chrX 21055684 intron bves + chrX 21055750 intron bves + chrX 21055816 intron bves + chrX_12_21055001 chrX_21055001 RAL-837 2926 chrX 21058164 21058170 chrX 21058286 21058292 4 122 4.0 2.5 3.2 1.0 128 chrX 21058164 intron bves + chrX 21058228 intron bves + chrX 21058292 intron bves + chrX_4_21055001 chrX_21055001 RAL-837 2927 chrX 21061866 21061891 chrX 21062371 21062396 roo 5 505 3.5 7.5 5.5 0.8 530 chrX 21061866 intron bves + chrX 21062131 intron bves + chrX 21062396 intron,3` UTR bves +,CG32512 - chrX_5_21060001 chrX_21060001 RAL-837 2928 chrX 21076315 21076357 chrX 21076411 21076451 9 96 3.0 1.5 2.2 2.8 136 chrX 21076315 intron bves + chrX 21076383 intron bves + chrX 21076451 intron bves + chrX_9_21075001 chrX_21075001 RAL-837 2929 chrX 21086120 21086162 chrX 21087169 21087206 jockey 16 1044 2.5 2.5 2.5 4.6 1086 chrX 21086120 intergenic not near genes chrX 21086663 intergenic not near genes chrX 21087206 intergenic not near genes chrX_16_21085001 chrX_21085001 RAL-837 2930 chrX 21088025 21088040 chrX 21088177 21088192 4 152 7.0 4.0 5.5 0.6 167 chrX 21088025 intergenic not near genes chrX 21088108 intergenic not near genes chrX 21088192 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-837 2931 chrX 21088043 21088075 chrX 21088174 21088227 5 134 3.5 3.5 3.5 1.1 184 chrX 21088043 intergenic not near genes chrX 21088135 intergenic not near genes chrX 21088227 intergenic not near genes chrX_5_21085001 chrX_21085001 RAL-837 2932 chrX 21190560 21190818 chrX 21190736 21190919 7 129 0.5 0.0 0.2 5.8 359 chrX 21190560 intergenic not near genes chrX 21190740 intergenic not near genes chrX 21190919 intergenic not near genes chrX_7_21190001 chrX_21190001 RAL-837 2933 chrX 21253268 21253298 chrX 21253365 21253393 5 97 5.0 3.0 4.0 1.0 125 chrX 21253268 intron CG32521 - chrX 21253330 intron CG32521 - chrX 21253393 intron CG32521 - chrX_5_21250001 chrX_21250001 RAL-837 2934 chrX 21268066 21268083 chrX 21268152 21268184 4 94 1.5 2.0 1.8 1.4 118 chrX 21268066 intron CG32521 - chrX 21268125 intron CG32521 - chrX 21268184 intron CG32521 - chrX_4_21265001 chrX_21265001 RAL-837 2935 chrX 21328096 21328146 chrX 21328227 21328277 11 130 3.0 3.0 3.0 2.8 181 chrX 21328096 3` UTR CG1486 + chrX 21328186 intergenic CG1486 +,tty - chrX 21328277 intergenic CG1486 +,tty - chrX_11_21325001 chrX_21325001 RAL-837 2936 chrX 21410624 21410669 chrX 21410723 21410767 5 94 4.5 3.5 4.0 1.0 143 chrX 21410624 intergenic CR45003 - chrX 21410696 intergenic CR45003 - chrX 21410767 intergenic CR45003 - chrX_5_21410001 chrX_21410001 RAL-837 2937 chrX 21419697 21419737 chrX 21419806 21419846 10 108 3.5 4.5 4.0 2.0 149 chrX 21419697 intergenic not near genes chrX 21419772 intergenic not near genes chrX 21419846 intergenic not near genes chrX_10_21415001 chrX_21415001 RAL-837 2938 chrX 21455201 21455239 chrX 21455396 21455446 8 199 3.5 0.0 1.8 2.9 245 chrX 21455201 intron CG42343 - chrX 21455324 intron CG42343 - chrX 21455446 intron CG42343 - chrX_8_21455001 chrX_21455001 RAL-837 2939 chrX 21458682 21458720 chrX 21464138 21464176 Ivk 6 5454 5.5 4.5 5.0 1.0 5494 chrX 21458682 intergenic not near genes chrX 21461429 intergenic not near genes chrX 21464176 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-837 2940 chrX 21492268 21492297 chrX 21492386 21492430 8 128 2.5 2.0 2.2 2.5 162 chrX 21492268 intergenic not near genes chrX 21492349 intergenic not near genes chrX 21492430 intergenic not near genes chrX_8_21490001 chrX_21490001 RAL-837 2941 chrX 21600429 21600446 chrX 21600524 21600556 5 110 6.0 4.5 5.2 0.8 127 chrX 21600429 intergenic CG14476 - chrX 21600492 intergenic CG14476 - chrX 21600556 3` UTR CG14476 - chrX_5_21600001 chrX_21600001 RAL-837 2942 chrX 21624925 21624945 chrX 21625004 21625055 5 95 1.5 2.0 1.8 1.8 130 chrX 21624925 3` UTR DIP1 - chrX 21624990 3` UTR DIP1 - chrX 21625055 3` UTR DIP1 - chrX_5_21620001 chrX_21620001 RAL-837 2943 chrX 21631063 21631114 chrX 21631168 21631219 5 101 2.0 3.5 2.8 1.3 156 chrX 21631063 intron CR44712 + chrX 21631141 5` UTR CR44712 + chrX 21631219 5` UTR CR44712 + chrX_5_21630001 chrX_21630001 RAL-837 2944 chrX 21668252 21668273 chrX 21668342 21668368 5 95 4.0 0.5 2.2 1.6 116 chrX 21668252 intergenic not near genes chrX 21668310 intergenic not near genes chrX 21668368 intergenic not near genes chrX_5_21665001 chrX_21665001 RAL-837 2945 chrX 22448258 22448266 chrX 22448417 22448425 6 159 5.5 5.5 5.5 0.9 167 chrX 22448258 intron CG14615 - chrX 22448342 intron CG14615 - chrX 22448425 intron CG14615 - chrX_6_22445001 chrX_22445001 RAL-837 2946 chrX 22478862 22478870 chrX 22479015 22479023 5 152 7.5 4.0 5.8 0.7 161 chrX 22478862 intron CG12576 - chrX 22478942 intron CG12576 - chrX 22479023 intron CG12576 - chrX_5_22475001 chrX_22475001 RAL-837 2947 chrX 22478873 22478898 chrX 22479009 22479051 8 149 2.5 3.0 2.8 2.1 178 chrX 22478873 intron CG12576 - chrX 22478962 intron CG12576 - chrX 22479051 intron CG12576 - chrX_8_22475001 chrX_22475001 RAL-837 2948 chrX 22564572 22564585 chrX 22575124 22575137 jockey 4 10552 13.0 4.0 8.5 0.4 10565 chrX 22564572 intergenic not near genes chrX 22569854 intergenic not near genes chrX 22575137 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-837 2949 chrX 22630438 22630450 chrX 22630544 22630583 5 127 2.0 3.0 2.5 1.4 145 chrX 22630438 intron Cda4 - chrX 22630510 intron Cda4 - chrX 22630583 intron Cda4 - chrX_5_22630001 chrX_22630001 RAL-837 2950 chrX 22677273 22677326 chrX 22677502 22677535 8 226 1.0 1.0 1.0 4.0 262 chrX 22677273 intron CR44997 + chrX 22677404 intron CR44997 + chrX 22677535 intron CR44997 + chrX_8_22675001 chrX_22675001 RAL-837 2951 chrX 22697502 22697519 chrX 22701804 22701836 Juan 6 4314 6.0 4.5 5.2 1.0 4334 chrX 22697502 intron CR44997 + chrX 22699669 intron CR44997 + chrX 22701836 intron CR44997 + chrX_6_22695001 chrX_22695001 RAL-837 2952 chrX 22771506 22771533 chrX 22774797 22774833 297 8 3298 4.5 3.0 3.8 1.7 3327 chrX 22771506 intron CR44997 + chrX 22773170 intron CR44997 + chrX 22774833 intron CR44997 + chrX_8_22770001 chrX_22770001 RAL-837 2953 chrX 22784087 22784100 chrX 22784164 22784203 4 96 1.5 2.5 2.0 1.3 116 chrX 22784087 intron CR44997 + chrX 22784145 intron CR44997 + chrX 22784203 intron CR44997 + chrX_4_22780001 chrX_22780001 RAL-837 2954 chrX 22785591 22785642 chrX 22785702 22785736 15 103 3.5 2.5 3.0 3.8 145 chrX 22785591 intron CR44997 + chrX 22785664 intron CR44997 + chrX 22785736 intron CR44997 + chrX_15_22785001 chrX_22785001 RAL-837 2955 chrX 22811986 22811994 chrX 22816776 22816786 F-element 4 4792 3.5 3.5 3.5 0.9 4800 chrX 22811986 intergenic CG12446 - chrX 22814386 intergenic not near genes chrX 22816786 intergenic not near genes chrX_4_22810001 chrX_22810001 RAL-837 2956 chrX 22820946 22820985 chrX 22821149 22821189 11 203 2.5 3.0 2.8 2.9 243 chrX 22820946 intergenic not near genes chrX 22821068 intergenic not near genes chrX 22821189 intergenic not near genes chrX_11_22820001 chrX_22820001 RAL-837 2957 chrX 22916185 22916209 chrX 22916311 22916365 12 147 0.0 4.0 2.0 4.0 180 chrX 22916185 intergenic not near genes chrX 22916275 intergenic not near genes chrX 22916365 intergenic not near genes chrX_12_22915001 chrX_22915001 RAL-837 2958 chrX 22922496 22922546 chrX 22922596 22922641 8 96 2.5 3.5 3.0 2.0 145 chrX 22922496 intergenic not near genes chrX 22922568 intergenic not near genes chrX 22922641 intergenic not near genes chrX_8_22920001 chrX_22920001 RAL-837 2959 chrX 22987084 22987134 chrX 22989763 22989783 Burdock 10 2673 2.5 3.0 2.8 2.6 2699 chrX 22987084 intron,intron stnA -,stnB - chrX 22988434 intron,intron stnA -,stnB - chrX 22989783 intron,intron stnA -,stnB - chrX_10_22985001 chrX_22985001 RAL-837 2960 chrX 22992387 22992430 chrX 22992523 22992572 10 143 2.5 2.5 2.5 2.9 185 chrX 22992387 intron,intron stnA -,stnB - chrX 22992480 intron,intron stnA -,stnB - chrX 22992572 3` UTR,exon stnA -,stnB - chrX_10_22990001 chrX_22990001 RAL-837 2961 chrX 22996306 22996341 chrX 23003548 23003587 roo 7 7248 3.5 3.0 3.2 1.7 7281 chrX 22996306 intron,intron stnA -,stnB - chrX 22999946 intron,intron stnA -,stnB - chrX 23003587 intron,intron stnA -,stnB - chrX_7_22995001 chrX_22995001 RAL-837 2962 chrX 23036375 23036414 chrX 23037788 23037835 pogo 12 1415 4.0 4.5 4.2 2.3 1460 chrX 23036375 intron CG12061 + chrX 23037105 intron CG12061 + chrX 23037835 intron CG12061 + chrX_12_23035001 chrX_23035001 RAL-837 2963 chrX 22967481 22967501 chrX 23154541 23154556 diver 5 187058 3.0 7.5 5.2 0.8 187075 chrX 22967481 intergenic not near genes chrX 23061018 intergenic not near genes chrX 23154556 intergenic not near genes chrX_5_23060001 chrX_23060001 RAL-837 2964 chrY 864711 864742 chrY 864808 864838 4 96 21.0 23.0 22.0 0.2 127 chrY 864711 intergenic not near genes chrY 864774 intergenic not near genes chrY 864838 intergenic not near genes chrY_4_860001 chrY_860001 RAL-837 2965 chrY 975801 975819 chrY 975875 976004 6 110 90.0 103.5 96.8 0.1 203 chrY 975801 intergenic not near genes chrY 975902 intergenic not near genes chrY 976004 intergenic not near genes chrY_6_975001 chrY_975001 RAL-837 2966 chrY 3664978 3664987 chrY 3665102 3665111 4 124 0.5 1.0 0.8 2.2 133 chrY 3664978 intergenic CG40948 + chrY 3665044 intergenic CG40948 + chrY 3665111 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-837