SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47448 47455 chr2L 52573 52575 jockey 4 5124 3.5 9.0 6.2 0.6 5127 chr2L 47448 intron Cda5 - chr2L 50012 intron Cda5 - chr2L 52575 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-832 2 chr2L 47464 47477 chr2L 52569 52602 jockey 4 5109 2.0 9.0 5.5 0.6 5138 chr2L 47464 intron Cda5 - chr2L 50033 intron Cda5 - chr2L 52602 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-832 3 chr2L 262509 262533 chr2L 262634 262674 4 128 1.5 3.5 2.5 1.1 165 chr2L 262509 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L 262592 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L 262674 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L_4_260001 chr2L_260001 RAL-832 4 chr2L 347865 347919 chr2L 355385 355394 blood 6 7504 3.0 5.5 4.2 1.2 7529 chr2L 347865 3` UTR Plc21C + chr2L 351630 intron Plc21C + chr2L 355394 3` UTR Plc21C + chr2L_6_350001 chr2L_350001 RAL-832 5 chr2L 407933 407966 chr2L 408029 408034 10 92 5.5 6.5 6.0 1.4 101 chr2L 407933 3` UTR RpI135 + chr2L 407984 intergenic RpI135 +,AP-2alpha - chr2L 408034 3` UTR AP-2alpha - chr2L_10_405001 chr2L_405001 RAL-832 6 chr2L 686923 686941 chr2L 695962 695981 roo 5 9042 1.0 1.5 1.2 2.3 9058 chr2L 686923 intron ds - chr2L 691452 intron ds - chr2L 695981 intron ds - chr2L_5_690001 chr2L_690001 RAL-832 7 chr2L 764542 764575 chr2L 764653 764695 8 116 5.0 1.5 3.2 1.9 153 chr2L 764542 intergenic not near genes chr2L 764618 intergenic not near genes chr2L 764695 intergenic not near genes chr2L_8_760001 chr2L_760001 RAL-832 8 chr2L 877850 877865 chr2L 877921 877941 5 82 1.5 2.0 1.8 1.8 91 chr2L 877850 3` UTR,exon CG15824 -,ninaA + chr2L 877896 3` UTR,intron CG15824 -,ninaA + chr2L 877941 3` UTR,intron CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-832 9 chr2L 906522 906560 chr2L 906624 906631 7 90 1.0 2.5 1.8 2.5 109 chr2L 906522 intergenic not near genes chr2L 906576 intergenic not near genes chr2L 906631 intergenic not near genes chr2L_7_905001 chr2L_905001 RAL-832 10 chr2L 964540 964574 chr2L 964644 964678 8 99 4.5 4.0 4.2 1.5 138 chr2L 964540 intergenic not near genes chr2L 964609 intergenic not near genes chr2L 964678 intergenic not near genes chr2L_8_960001 chr2L_960001 RAL-832 11 chr2L 1023006 1023028 chr2L 1023095 1023117 4 94 1.5 2.0 1.8 1.4 111 chr2L 1023006 intron IA-2 - chr2L 1023062 intron IA-2 - chr2L 1023117 intron IA-2 - chr2L_4_1020001 chr2L_1020001 RAL-832 12 chr2L 1164240 1164282 chr2L 1164331 1164381 11 99 5.5 4.0 4.8 1.9 141 chr2L 1164240 intergenic IntS14 +,CG5080 - chr2L 1164310 intergenic IntS14 +,CG5080 - chr2L 1164381 intergenic IntS14 +,CG5080 - chr2L_11_1160001 chr2L_1160001 RAL-832 13 chr2L 1178672 1178698 chr2L 1178771 1178802 8 97 5.0 4.0 4.5 1.5 130 chr2L 1178672 intron CG4896 + chr2L 1178737 intron CG4896 + chr2L 1178802 intron CG4896 + chr2L_8_1175001 chr2L_1175001 RAL-832 14 chr2L 1220140 1220160 chr2L 1227625 1227644 blood 4 7484 3.0 6.0 4.5 0.7 7504 chr2L 1220140 intron CG42329 + chr2L 1223892 intron CG42329 + chr2L 1227644 intron CG42329 + chr2L_4_1220001 chr2L_1220001 RAL-832 15 chr2L 1237886 1237921 chr2L 1237983 1237996 8 90 2.0 7.0 4.5 1.5 110 chr2L 1237886 intergenic not near genes chr2L 1237941 intergenic not near genes chr2L 1237996 intergenic not near genes chr2L_8_1235001 chr2L_1235001 RAL-832 16 chr2L 1244392 1244437 chr2L 1244489 1244513 14 94 0.5 3.0 1.8 5.0 121 chr2L 1244392 intergenic not near genes chr2L 1244452 intergenic not near genes chr2L 1244513 intergenic not near genes chr2L_14_1240001 chr2L_1240001 RAL-832 17 chr2L 1301780 1301782 chr2L 1302303 1302339 gypsy 4 547 0.0 7.0 3.5 0.9 559 chr2L 1301780 intergenic not near genes chr2L 1302060 intergenic not near genes chr2L 1302339 intergenic not near genes chr2L_4_1300001 chr2L_1300001 RAL-832 18 chr2L 1322002 1322052 chr2L 1322111 1322128 8 99 3.0 1.5 2.2 2.5 126 chr2L 1322002 intergenic not near genes chr2L 1322065 intergenic not near genes chr2L 1322128 intergenic not near genes chr2L_8_1320001 chr2L_1320001 RAL-832 19 chr2L 1331071 1331094 chr2L 1331151 1331184 6 91 0.5 1.5 1.0 3.0 113 chr2L 1331071 intergenic not near genes chr2L 1331128 intergenic not near genes chr2L 1331184 intergenic not near genes chr2L_6_1330001 chr2L_1330001 RAL-832 20 chr2L 1464142 1464160 chr2L 1464394 1464412 4 251 5.5 3.0 4.2 0.8 270 chr2L 1464142 intergenic not near genes chr2L 1464277 intergenic not near genes chr2L 1464412 intergenic not near genes chr2L_4_1460001 chr2L_1460001 RAL-832 21 chr2L 1481452 1481469 chr2L 1481558 1481568 4 100 3.0 4.5 3.8 0.8 116 chr2L 1481452 intergenic not near genes chr2L 1481510 intergenic not near genes chr2L 1481568 intergenic not near genes chr2L_4_1480001 chr2L_1480001 RAL-832 22 chr2L 1508032 1508065 chr2L 1508136 1508168 9 98 5.0 1.5 3.2 2.1 136 chr2L 1508032 intergenic not near genes chr2L 1508100 intergenic not near genes chr2L 1508168 intergenic not near genes chr2L_9_1505001 chr2L_1505001 RAL-832 23 chr2L 1552658 1552669 chr2L 1552891 1552910 4 239 6.5 0.0 3.2 1.0 252 chr2L 1552658 intergenic not near genes chr2L 1552784 intergenic not near genes chr2L 1552910 intergenic not near genes chr2L_4_1550001 chr2L_1550001 RAL-832 24 chr2L 1568833 1568856 chr2L 1568923 1568960 5 102 5.5 1.5 3.5 1.1 127 chr2L 1568833 intron haf + chr2L 1568896 intron haf + chr2L 1568960 intron haf + chr2L_5_1565001 chr2L_1565001 RAL-832 25 chr2L 1570673 1570704 chr2L 1573565 1573596 F-element 6 2892 5.0 1.0 3.0 1.5 2923 chr2L 1570673 intron haf + chr2L 1572134 intron haf + chr2L 1573596 intron haf + chr2L_6_1570001 chr2L_1570001 RAL-832 26 chr2L 1591871 1591890 chr2L 1591950 1591994 8 88 3.5 2.5 3.0 2.0 123 chr2L 1591871 intron haf + chr2L 1591932 intron haf + chr2L 1591994 intron haf + chr2L_8_1590001 chr2L_1590001 RAL-832 27 chr2L 1678985 1679007 chr2L 1686440 1686471 blood 7 7471 3.5 5.0 4.2 1.3 7486 chr2L 1678985 intron chinmo + chr2L 1682728 intron chinmo + chr2L 1686471 intron chinmo + chr2L_7_1680001 chr2L_1680001 RAL-832 28 chr2L 1711353 1711363 chr2L 1711680 1711685 mdg3 6 328 5.0 2.5 3.8 1.2 332 chr2L 1711353 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711519 3` UTR frtz - chr2L 1711685 3` UTR frtz - chr2L_6_1710001 chr2L_1710001 RAL-832 29 chr2L 1910521 1910560 chr2L 1910630 1910669 9 104 3.0 3.5 3.2 2.1 148 chr2L 1910521 intron CG7337 + chr2L 1910595 intron CG7337 + chr2L 1910669 intron CG7337 + chr2L_9_1910001 chr2L_1910001 RAL-832 30 chr2L 1948613 1948658 chr2L 1948731 1948753 5 116 0.0 0.5 0.2 4.2 140 chr2L 1948613 intergenic not near genes chr2L 1948683 intergenic not near genes chr2L 1948753 intergenic not near genes chr2L_5_1945001 chr2L_1945001 RAL-832 31 chr2L 2043454 2043502 chr2L 2043556 2043592 16 102 8.5 2.0 5.2 2.6 138 chr2L 2043454 3` UTR Su(dx) + chr2L 2043523 3` UTR Su(dx) + chr2L 2043592 3` UTR Su(dx) + chr2L_16_2040001 chr2L_2040001 RAL-832 32 chr2L 2075503 2075540 chr2L 2075602 2075646 9 97 3.5 1.5 2.5 2.6 143 chr2L 2075503 intron dpr3 - chr2L 2075574 intron dpr3 - chr2L 2075646 intron dpr3 - chr2L_9_2075001 chr2L_2075001 RAL-832 33 chr2L 2125524 2125541 chr2L 2125863 2125889 4 336 9.5 21.0 15.2 0.2 365 chr2L 2125524 intergenic not near genes chr2L 2125706 intergenic not near genes chr2L 2125889 intergenic not near genes chr2L_4_2125001 chr2L_2125001 RAL-832 34 chr2L 2256464 2256468 chr2L 2256559 2256568 6 99 0.5 4.0 2.2 1.9 104 chr2L 2256464 intergenic not near genes chr2L 2256516 intergenic not near genes chr2L 2256568 intergenic not near genes chr2L_6_2255001 chr2L_2255001 RAL-832 35 chr2L 2317102 2317128 chr2L 2317293 2317319 5 191 21.5 17.0 19.2 0.2 217 chr2L 2317102 intron,intron CG9967 -,eys + chr2L 2317210 intron,intron CG9967 -,eys + chr2L 2317319 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 RAL-832 36 chr2L 2348121 2348134 chr2L 2348191 2348202 6 80 1.5 2.5 2.0 2.0 81 chr2L 2348121 intron,intron CG9967 -,eys + chr2L 2348162 intron,intron CG9967 -,eys + chr2L 2348202 intron,intron CG9967 -,eys + chr2L_6_2345001 chr2L_2345001 RAL-832 37 chr2L 2504206 2504236 chr2L 2504304 2504331 10 94 5.0 3.5 4.2 1.9 125 chr2L 2504206 intergenic not near genes chr2L 2504268 intergenic not near genes chr2L 2504331 intergenic not near genes chr2L_10_2500001 chr2L_2500001 RAL-832 38 chr2L 2557820 2557843 chr2L 2557925 2557948 5 104 0.5 4.0 2.2 1.6 128 chr2L 2557820 intergenic not near genes chr2L 2557884 intergenic not near genes chr2L 2557948 intergenic not near genes chr2L_5_2555001 chr2L_2555001 RAL-832 39 chr2L 2698873 2698893 chr2L 2698965 2698994 4 98 1.0 1.0 1.0 2.0 121 chr2L 2698873 intron CG31690 + chr2L 2698934 intron CG31690 + chr2L 2698994 intron CG31690 + chr2L_4_2695001 chr2L_2695001 RAL-832 40 chr2L 2713499 2713544 chr2L 2713618 2713627 4 104 1.5 1.0 1.2 1.8 128 chr2L 2713499 intron CG31690 + chr2L 2713563 intron CG31690 + chr2L 2713627 intron CG31690 + chr2L_4_2710001 chr2L_2710001 RAL-832 41 chr2L 2739660 2739694 chr2L 2739758 2739792 9 98 3.0 8.0 5.5 1.4 132 chr2L 2739660 3` UTR CG31689 + chr2L 2739726 3` UTR CG31689 + chr2L 2739792 3` UTR CG31689 + chr2L_9_2735001 chr2L_2735001 RAL-832 42 chr2L 2772608 2772615 chr2L 2779196 2779219 297 5 6595 5.0 6.0 5.5 0.8 6611 chr2L 2772608 3` UTR Syt1 - chr2L 2775914 intron Syt1 - chr2L 2779219 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RAL-832 43 chr2L 2826547 2826576 chr2L 2826631 2826666 4 94 0.0 2.0 1.0 2.0 119 chr2L 2826547 intron Duox - chr2L 2826606 intron Duox - chr2L 2826666 intron Duox - chr2L_4_2825001 chr2L_2825001 RAL-832 44 chr2L 2885365 2885397 chr2L 2885453 2885485 5 89 2.0 1.5 1.8 1.8 120 chr2L 2885365 intron NTPase - chr2L 2885425 intron NTPase - chr2L 2885485 intron NTPase - chr2L_5_2885001 chr2L_2885001 RAL-832 45 chr2L 2921282 2921307 chr2L 2921605 2921631 5 322 1.5 4.5 3.0 1.2 349 chr2L 2921282 intron lilli + chr2L 2921456 intron lilli + chr2L 2921631 intron lilli + chr2L_5_2920001 chr2L_2920001 RAL-832 46 chr2L 2937425 2937448 chr2L 2937497 2937540 5 90 2.0 2.0 2.0 1.7 115 chr2L 2937425 intron lilli + chr2L 2937482 intron lilli + chr2L 2937540 intron lilli + chr2L_5_2935001 chr2L_2935001 RAL-832 47 chr2L 3073010 3073056 chr2L 3078233 3078259 copia 7 5219 4.0 2.0 3.0 1.8 5249 chr2L 3073010 intron toc - chr2L 3075634 intron toc - chr2L 3078259 intron toc - chr2L_7_3075001 chr2L_3075001 RAL-832 48 chr2L 3108856 3108893 chr2L 3108942 3108959 7 87 2.5 0.5 1.5 2.8 103 chr2L 3108856 exon toc - chr2L 3108908 intron toc - chr2L 3108959 intron toc - chr2L_7_3105001 chr2L_3105001 RAL-832 49 chr2L 3134939 3134945 chr2L 3135036 3135042 4 97 4.5 0.0 2.2 1.2 103 chr2L 3134939 intron toc - chr2L 3134990 intron toc - chr2L 3135042 intron toc - chr2L_4_3130001 chr2L_3130001 RAL-832 50 chr2L 3186450 3186501 chr2L 3186556 3186597 12 100 3.0 3.5 3.2 2.9 147 chr2L 3186450 intron CG34393 - chr2L 3186524 intron CG34393 - chr2L 3186597 intron CG34393 - chr2L_12_3185001 chr2L_3185001 RAL-832 51 chr2L 3192192 3192232 chr2L 3192323 3192343 7 122 1.0 4.0 2.5 2.0 151 chr2L 3192192 exon CG34393 - chr2L 3192268 intron CG34393 - chr2L 3192343 intron CG34393 - chr2L_7_3190001 chr2L_3190001 RAL-832 52 chr2L 3202724 3202741 chr2L 3210173 3210190 mdg1 8 7449 11.0 1.5 6.2 1.1 7466 chr2L 3202724 intergenic not near genes chr2L 3206457 intergenic not near genes chr2L 3210190 intergenic CR45336 + chr2L_8_3205001 chr2L_3205001 RAL-832 53 chr2L 3202742 3202770 chr2L 3210166 3210219 mdg1 7 7437 4.0 1.5 2.8 1.8 7477 chr2L 3202742 intergenic not near genes chr2L 3206480 intergenic not near genes chr2L 3210219 intergenic CR45336 + chr2L_7_3205001 chr2L_3205001 RAL-832 54 chr2L 3251484 3251522 chr2L 3259059 3259107 springer 8 7574 5.0 2.5 3.8 1.7 7623 chr2L 3251484 intergenic not near genes chr2L 3255296 intergenic not near genes chr2L 3259107 intergenic not near genes chr2L_8_3255001 chr2L_3255001 RAL-832 55 chr2L 3272956 3272969 chr2L 3273052 3273065 4 96 0.5 6.0 3.2 1.0 109 chr2L 3272956 intergenic not near genes chr2L 3273010 intergenic not near genes chr2L 3273065 intergenic not near genes chr2L_4_3270001 chr2L_3270001 RAL-832 56 chr2L 3291216 3291261 chr2L 3291316 3291326 9 89 4.5 2.5 3.5 2.0 110 chr2L 3291216 intergenic CG9664 - chr2L 3291271 3` UTR CG9664 - chr2L 3291326 3` UTR CG9664 - chr2L_9_3290001 chr2L_3290001 RAL-832 57 chr2L 3388578 3388630 chr2L 3388839 3388891 pogo 18 259 5.0 7.5 6.2 2.5 313 chr2L 3388578 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388891 intergenic CG42460 -,CR44791 + chr2L_18_3385001 chr2L_3385001 RAL-832 58 chr2L 3582885 3582900 chr2L 3582976 3582977 4 90 2.5 5.5 4.0 0.8 92 chr2L 3582885 intergenic not near genes chr2L 3582931 intergenic not near genes chr2L 3582977 intergenic not near genes chr2L_4_3580001 chr2L_3580001 RAL-832 59 chr2L 3638124 3638169 chr2L 3638230 3638269 6 102 1.5 1.0 1.2 2.7 145 chr2L 3638124 intron for - chr2L 3638196 intron for - chr2L 3638269 intron for - chr2L_6_3635001 chr2L_3635001 RAL-832 60 chr2L 3649777 3649806 chr2L 3654990 3655010 copia 7 5212 1.5 2.0 1.8 2.5 5233 chr2L 3649777 intron for - chr2L 3652394 intron for - chr2L 3655010 intron for - chr2L_7_3650001 chr2L_3650001 RAL-832 61 chr2L 3702911 3702920 chr2L 3703003 3703015 4 91 2.5 6.0 4.2 0.8 104 chr2L 3702911 5` UTR CR44311 + chr2L 3702963 intergenic CR44311 + chr2L 3703015 intergenic CR44311 + chr2L_4_3700001 chr2L_3700001 RAL-832 62 chr2L 3783230 3783279 chr2L 3783341 3783377 8 102 1.5 2.5 2.0 2.7 147 chr2L 3783230 exon bowl + chr2L 3783304 3` UTR bowl + chr2L 3783377 3` UTR bowl + chr2L_8_3780001 chr2L_3780001 RAL-832 63 chr2L 3785679 3785685 chr2L 3785785 3785791 4 105 0.0 2.5 1.2 1.8 112 chr2L 3785679 intergenic CG31960 +,CG31958 + chr2L 3785735 intergenic CG31958 +,CG31960 + chr2L 3785791 5` UTR CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-832 64 chr2L 3844334 3844354 chr2L 3844466 3844468 4 124 3.0 1.5 2.2 1.2 134 chr2L 3844334 intergenic not near genes chr2L 3844401 intergenic not near genes chr2L 3844468 intergenic not near genes chr2L_4_3840001 chr2L_3840001 RAL-832 65 chr2L 3883581 3883626 chr2L 3883753 3883769 9 162 4.5 2.5 3.5 2.0 188 chr2L 3883581 intron capu - chr2L 3883675 intron capu - chr2L 3883769 intron capu - chr2L_9_3880001 chr2L_3880001 RAL-832 66 chr2L 3908400 3908420 chr2L 3908650 3908688 5 257 2.0 2.0 2.0 1.7 288 chr2L 3908400 intron fred - chr2L 3908544 intron fred - chr2L 3908688 intron fred - chr2L_5_3905001 chr2L_3905001 RAL-832 67 chr2L 3943776 3943826 chr2L 3943887 3943937 8 110 0.0 4.0 2.0 2.7 161 chr2L 3943776 intron fred - chr2L 3943856 intron fred - chr2L 3943937 intron fred - chr2L_8_3940001 chr2L_3940001 RAL-832 68 chr2L 3950075 3950102 chr2L 3950159 3950198 9 95 1.5 0.5 1.0 4.5 123 chr2L 3950075 intron fred - chr2L 3950136 intron fred - chr2L 3950198 intron fred - chr2L_9_3950001 chr2L_3950001 RAL-832 69 chr2L 3997571 3997580 chr2L 3997639 3997658 7 86 0.0 2.5 1.2 3.2 87 chr2L 3997571 intergenic not near genes chr2L 3997614 intergenic not near genes chr2L 3997658 intergenic not near genes chr2L_7_3995001 chr2L_3995001 RAL-832 70 chr2L 4001642 4001689 chr2L 4001760 4001807 7 108 2.5 1.5 2.0 2.3 165 chr2L 4001642 intergenic CR45344 + chr2L 4001724 intergenic CR45344 + chr2L 4001807 intergenic CR45344 + chr2L_7_4000001 chr2L_4000001 RAL-832 71 chr2L 4037787 4037805 chr2L 4037894 4037911 6 104 6.0 6.5 6.2 0.8 124 chr2L 4037787 intron ed + chr2L 4037849 intron ed + chr2L 4037911 intron ed + chr2L_6_4035001 chr2L_4035001 RAL-832 72 chr2L 4049920 4049970 chr2L 4050020 4050021 4 82 2.5 0.5 1.5 1.6 101 chr2L 4049920 intron ed + chr2L 4049970 intron ed + chr2L 4050021 intron ed + chr2L_4_4045001 chr2L_4045001 RAL-832 73 chr2L 4155609 4155629 chr2L 4155853 4155882 6 250 0.5 5.0 2.8 1.6 273 chr2L 4155609 intergenic not near genes chr2L 4155746 intergenic not near genes chr2L 4155882 intergenic not near genes chr2L_6_4155001 chr2L_4155001 RAL-832 74 chr2L 4317880 4317896 chr2L 4317957 4317985 6 88 4.0 3.0 3.5 1.3 105 chr2L 4317880 intron tutl + chr2L 4317932 intron tutl + chr2L 4317985 intron tutl + chr2L_6_4315001 chr2L_4315001 RAL-832 75 chr2L 4470858 4470885 chr2L 4470935 4470982 9 94 3.0 3.0 3.0 2.2 124 chr2L 4470858 intron ine - chr2L 4470920 intron ine - chr2L 4470982 intron ine - chr2L_9_4470001 chr2L_4470001 RAL-832 76 chr2L 4601686 4601731 chr2L 4609146 4609192 mdg1 8 7454 4.0 2.0 3.0 2.0 7506 chr2L 4601686 intron dp - chr2L 4605439 intron dp - chr2L 4609192 intron dp - chr2L_8_4605001 chr2L_4605001 RAL-832 77 chr2L 4661829 4661858 chr2L 4669429 4669442 opus 4 7594 3.5 4.0 3.8 0.8 7613 chr2L 4661829 intergenic not near genes chr2L 4665636 intergenic not near genes chr2L 4669442 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-832 78 chr2L 4809676 4809718 chr2L 4809776 4809826 17 104 2.5 4.0 3.2 4.0 150 chr2L 4809676 intergenic not near genes chr2L 4809751 intergenic not near genes chr2L 4809826 intergenic not near genes chr2L_17_4805001 chr2L_4805001 RAL-832 79 chr2L 4819497 4819514 chr2L 4819628 4819642 7 138 1.5 3.5 2.5 2.0 145 chr2L 4819497 intergenic not near genes chr2L 4819570 intergenic not near genes chr2L 4819642 intergenic not near genes chr2L_7_4815001 chr2L_4815001 RAL-832 80 chr2L 4858454 4858481 chr2L 4858556 4858589 10 104 1.0 3.0 2.0 3.3 135 chr2L 4858454 intron pog + chr2L 4858522 intron pog + chr2L 4858589 intron pog + chr2L_10_4855001 chr2L_4855001 RAL-832 81 chr2L 4862281 4862306 chr2L 4862367 4862368 4 82 2.0 3.0 2.5 1.1 87 chr2L 4862281 intron pog + chr2L 4862324 intron pog + chr2L 4862368 intron pog + chr2L_4_4860001 chr2L_4860001 RAL-832 82 chr2L 4869470 4869498 chr2L 4869547 4869595 5 92 2.5 2.0 2.2 1.6 125 chr2L 4869470 intron pog + chr2L 4869532 intron pog + chr2L 4869595 intron pog + chr2L_5_4865001 chr2L_4865001 RAL-832 83 chr2L 4892887 4892891 chr2L 4892975 4892994 4 99 0.0 6.5 3.2 1.0 107 chr2L 4892887 intron CG3036 + chr2L 4892940 intron CG3036 + chr2L 4892994 intron CG3036 + chr2L_4_4890001 chr2L_4890001 RAL-832 84 chr2L 4923238 4923253 chr2L 4923333 4923362 4 106 0.0 1.0 0.5 2.7 124 chr2L 4923238 intron hoe1 - chr2L 4923300 intron hoe1 - chr2L 4923362 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-832 85 chr2L 4925659 4925696 chr2L 4925758 4925795 4 99 2.0 1.0 1.5 1.6 136 chr2L 4925659 intron hoe1 - chr2L 4925727 intron hoe1 - chr2L 4925795 intron hoe1 - chr2L_4_4925001 chr2L_4925001 RAL-832 86 chr2L 4996073 4996113 chr2L 4996170 4996210 10 95 3.5 3.0 3.2 2.4 137 chr2L 4996073 intron Rtnl1 - chr2L 4996142 intron Rtnl1 - chr2L 4996210 intron Rtnl1 - chr2L_10_4995001 chr2L_4995001 RAL-832 87 chr2L 5085026 5085069 chr2L 5085138 5085167 5 109 0.0 5.5 2.8 1.3 141 chr2L 5085026 intron pgant5 - chr2L 5085096 intron pgant5 - chr2L 5085167 intron pgant5 - chr2L_5_5085001 chr2L_5085001 RAL-832 88 chr2L 5092406 5092441 chr2L 5092502 5092548 11 100 4.0 5.0 4.5 2.0 142 chr2L 5092406 intron pgant5 - chr2L 5092477 intron pgant5 - chr2L 5092548 intron pgant5 - chr2L_11_5090001 chr2L_5090001 RAL-832 89 chr2L 5117282 5117322 chr2L 5117384 5117419 14 94 7.0 4.5 5.8 2.1 137 chr2L 5117282 intron Msp300 + chr2L 5117350 intron Msp300 + chr2L 5117419 intron Msp300 + chr2L_14_5115001 chr2L_5115001 RAL-832 90 chr2L 5120954 5120998 chr2L 5121068 5121112 5 108 3.0 3.5 3.2 1.2 158 chr2L 5120954 intron Msp300 + chr2L 5121033 intron Msp300 + chr2L 5121112 intron Msp300 + chr2L_5_5120001 chr2L_5120001 RAL-832 91 chr2L 5210237 5210273 chr2L 5213544 5213568 5 3304 41.5 18.5 30.0 0.2 3331 chr2L 5210237 intergenic Cyp28d1 + chr2L 5211902 exon Cyp28d1 + chr2L 5213568 exon CG7742 - chr2L_5_5210001 chr2L_5210001 RAL-832 92 chr2L 5210236 5210270 chr2L 5213572 5213585 5 3316 40.5 20.5 30.5 0.2 3349 chr2L 5210236 intergenic Cyp28d1 + chr2L 5211910 exon Cyp28d1 + chr2L 5213585 exon CG7742 - chr2L_5_5210001 chr2L_5210001 RAL-832 93 chr2L 5342114 5342150 chr2L 5342220 5342222 4 88 5.0 1.0 3.0 1.0 108 chr2L 5342114 5` UTR CG12512 - chr2L 5342168 5` UTR CG12512 - chr2L 5342222 5` UTR CG12512 - chr2L_4_5340001 chr2L_5340001 RAL-832 94 chr2L 5492538 5492542 chr2L 5492636 5492681 4 109 0.0 4.5 2.2 1.2 143 chr2L 5492538 intergenic not near genes chr2L 5492610 intergenic not near genes chr2L 5492681 intergenic not near genes chr2L_4_5490001 chr2L_5490001 RAL-832 95 chr2L 5500051 5500074 chr2L 5500157 5500176 7 104 1.0 2.5 1.8 2.5 125 chr2L 5500051 intergenic not near genes chr2L 5500114 intergenic not near genes chr2L 5500176 intergenic not near genes chr2L_7_5500001 chr2L_5500001 RAL-832 96 chr2L 5508520 5508559 chr2L 5508616 5508645 7 94 1.5 6.5 4.0 1.4 125 chr2L 5508520 intergenic not near genes chr2L 5508582 intergenic not near genes chr2L 5508645 intergenic not near genes chr2L_7_5505001 chr2L_5505001 RAL-832 97 chr2L 5516642 5516685 chr2L 5516741 5516784 21 97 7.0 7.0 7.0 2.6 142 chr2L 5516642 intergenic not near genes chr2L 5516713 intergenic not near genes chr2L 5516784 intergenic not near genes chr2L_21_5515001 chr2L_5515001 RAL-832 98 chr2L 5573662 5573693 chr2L 5573758 5573789 13 95 6.5 5.5 6.0 1.9 127 chr2L 5573662 intergenic not near genes chr2L 5573726 intergenic not near genes chr2L 5573789 intergenic not near genes chr2L_13_5570001 chr2L_5570001 RAL-832 99 chr2L 5589787 5589836 chr2L 5589975 5590028 7 190 1.0 2.5 1.8 2.5 241 chr2L 5589787 intergenic not near genes chr2L 5589908 intergenic not near genes chr2L 5590028 intergenic not near genes chr2L_7_5585001 chr2L_5585001 RAL-832 100 chr2L 5672157 5672196 chr2L 5672251 5672291 13 98 2.5 3.0 2.8 3.4 134 chr2L 5672157 intergenic not near genes chr2L 5672224 intergenic not near genes chr2L 5672291 intergenic not near genes chr2L_13_5670001 chr2L_5670001 RAL-832 101 chr2L 5695841 5695890 chr2L 5695953 5695997 13 110 5.5 4.5 5.0 2.2 156 chr2L 5695841 intergenic not near genes chr2L 5695919 intergenic not near genes chr2L 5695997 intergenic not near genes chr2L_13_5695001 chr2L_5695001 RAL-832 102 chr2L 5806229 5806240 chr2L 5806352 5806363 5 121 3.0 7.0 5.0 0.8 134 chr2L 5806229 intron CG11034 + chr2L 5806296 intron CG11034 + chr2L 5806363 intron CG11034 + chr2L_5_5805001 chr2L_5805001 RAL-832 103 chr2L 5814671 5814712 chr2L 5814774 5814815 6 103 4.0 2.0 3.0 1.5 144 chr2L 5814671 intergenic not near genes chr2L 5814743 intergenic not near genes chr2L 5814815 intergenic not near genes chr2L_6_5810001 chr2L_5810001 RAL-832 104 chr2L 5827707 5827741 chr2L 5836720 5836732 roo 8 9011 3.5 4.5 4.0 1.6 9025 chr2L 5827707 intron TrissinR + chr2L 5832220 intron TrissinR + chr2L 5836732 intron TrissinR + chr2L_8_5830001 chr2L_5830001 RAL-832 105 chr2L 5989014 5989040 chr2L 5989110 5989116 6 91 7.0 0.5 3.8 1.2 102 chr2L 5989014 intergenic ifc +,lid - chr2L 5989065 intergenic ifc +,lid - chr2L 5989116 intergenic ifc +,lid - chr2L_6_5985001 chr2L_5985001 RAL-832 106 chr2L 5989041 5989062 chr2L 5989109 5989123 7 78 4.0 0.5 2.2 2.2 82 chr2L 5989041 intergenic ifc +,lid - chr2L 5989082 intergenic ifc +,lid - chr2L 5989123 intergenic ifc +,lid - chr2L_7_5985001 chr2L_5985001 RAL-832 107 chr2L 5993308 5993361 chr2L 5993419 5993464 13 110 0.5 2.5 1.5 5.2 156 chr2L 5993308 exon lid - chr2L 5993386 intron lid - chr2L 5993464 intron lid - chr2L_13_5990001 chr2L_5990001 RAL-832 108 chr2L 6007097 6007123 chr2L 6007183 6007194 6 86 1.5 0.5 1.0 3.0 97 chr2L 6007097 intergenic CG9098 -,Gal - chr2L 6007146 intergenic CG9098 -,Gal - chr2L 6007194 intergenic CG9098 -,Gal - chr2L_6_6005001 chr2L_6005001 RAL-832 109 chr2L 6037020 6037061 chr2L 6037112 6037154 15 93 2.0 7.0 4.5 2.7 134 chr2L 6037020 3` UTR CG9117 - chr2L 6037087 3` UTR CG9117 - chr2L 6037154 exon CG9117 - chr2L_15_6035001 chr2L_6035001 RAL-832 110 chr2L 6106229 6106236 chr2L 6106323 6106346 6 104 1.5 8.0 4.8 1.0 117 chr2L 6106229 intron stai + chr2L 6106288 intron stai + chr2L 6106346 intron stai + chr2L_6_6105001 chr2L_6105001 RAL-832 111 chr2L 6108775 6108820 chr2L 6108877 6108921 5 94 2.5 1.5 2.0 1.7 146 chr2L 6108775 intron stai + chr2L 6108848 intron stai + chr2L 6108921 intron stai + chr2L_5_6105001 chr2L_6105001 RAL-832 112 chr2L 6136535 6136546 chr2L 6136651 6136661 5 115 3.5 4.5 4.0 1.0 126 chr2L 6136535 intergenic not near genes chr2L 6136598 intergenic not near genes chr2L 6136661 intergenic not near genes chr2L_5_6135001 chr2L_6135001 RAL-832 113 chr2L 6227719 6227727 chr2L 6227804 6227831 5 100 6.0 5.5 5.8 0.7 112 chr2L 6227719 intergenic not near genes chr2L 6227775 intergenic not near genes chr2L 6227831 intergenic not near genes chr2L_5_6225001 chr2L_6225001 RAL-832 114 chr2L 6279632 6279649 chr2L 6279720 6279737 INE-1 10 92 4.0 1.0 2.5 2.9 105 chr2L 6279632 intron Ddr + chr2L 6279684 intron Ddr + chr2L 6279737 intron Ddr + chr2L_10_6275001 chr2L_6275001 RAL-832 115 chr2L 6349061 6349072 chr2L 6349159 6349170 4 96 5.0 3.5 4.2 0.8 109 chr2L 6349061 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349170 intergenic CG9498 - chr2L_4_6345001 chr2L_6345001 RAL-832 116 chr2L 6363138 6363183 chr2L 6366076 6366078 Burdock 12 2926 2.0 1.5 1.8 4.3 2940 chr2L 6363138 intergenic not near genes chr2L 6364608 intergenic not near genes chr2L 6366078 intergenic not near genes chr2L_12_6360001 chr2L_6360001 RAL-832 117 chr2L 6426839 6426887 chr2L 6445119 6445151 roo 12 18276 5.5 1.5 3.5 2.7 18312 chr2L 6426839 3` UTR CG9527 - chr2L 6435995 intron CG9527 - chr2L 6445151 exon CG9527 - chr2L_12_6435001 chr2L_6435001 RAL-832 118 chr2L 6537125 6537165 chr2L 6537223 6537263 13 97 2.5 3.5 3.0 3.2 138 chr2L 6537125 intron eya - chr2L 6537194 intron eya - chr2L 6537263 intron eya - chr2L_13_6535001 chr2L_6535001 RAL-832 119 chr2L 6598119 6598133 chr2L 6599096 6599110 4 977 4.0 4.0 4.0 0.8 991 chr2L 6598119 intron CG11319 - chr2L 6598614 intron CG11319 - chr2L 6599110 intron CG11319 - chr2L_4_6595001 chr2L_6595001 RAL-832 120 chr2L 6746102 6746118 chr2L 6746173 6746189 6 86 3.5 2.5 3.0 1.5 87 chr2L 6746102 intron CG11221 + chr2L 6746146 intron CG11221 + chr2L 6746189 intron CG11221 + chr2L_6_6745001 chr2L_6745001 RAL-832 121 chr2L 6836490 6836509 chr2L 6836592 6836609 4 100 6.5 7.5 7.0 0.5 119 chr2L 6836490 intron sens-2 + chr2L 6836550 intron sens-2 + chr2L 6836609 intron sens-2 + chr2L_4_6835001 chr2L_6835001 RAL-832 122 chr2L 6836513 6836525 chr2L 6836584 6836627 5 90 3.0 6.5 4.8 0.9 114 chr2L 6836513 intron sens-2 + chr2L 6836570 intron sens-2 + chr2L 6836627 intron sens-2 + chr2L_5_6835001 chr2L_6835001 RAL-832 123 chr2L 6891433 6891469 chr2L 6891551 6891581 8 115 2.0 3.0 2.5 2.3 148 chr2L 6891433 intron Nlg2 + chr2L 6891507 intron Nlg2 + chr2L 6891581 intron Nlg2 + chr2L_8_6890001 chr2L_6890001 RAL-832 124 chr2L 7030059 7030108 chr2L 7030160 7030207 15 90 3.5 4.0 3.8 3.1 148 chr2L 7030059 intergenic Rab30 - chr2L 7030133 intergenic Rab30 - chr2L 7030207 intergenic Rab30 - chr2L_15_7030001 chr2L_7030001 RAL-832 125 chr2L 7041257 7041270 chr2L 7041366 7041379 4 109 1.5 7.0 4.2 0.8 122 chr2L 7041257 intron milt + chr2L 7041318 intron milt + chr2L 7041379 intron milt + chr2L_4_7040001 chr2L_7040001 RAL-832 126 chr2L 7041275 7041286 chr2L 7041365 7041395 10 106 1.0 7.0 4.0 2.0 120 chr2L 7041275 intron milt + chr2L 7041335 intron milt + chr2L 7041395 intron milt + chr2L_10_7040001 chr2L_7040001 RAL-832 127 chr2L 7043520 7043529 chr2L 7043667 7043683 5 151 1.0 4.5 2.8 1.3 163 chr2L 7043520 intron milt + chr2L 7043602 intron milt + chr2L 7043683 intron milt + chr2L_5_7040001 chr2L_7040001 RAL-832 128 chr2L 7077335 7077387 chr2L 7077431 7077466 12 90 2.0 1.5 1.8 4.3 131 chr2L 7077335 intron Pvf2 - chr2L 7077400 intron Pvf2 - chr2L 7077466 intron Pvf2 - chr2L_12_7075001 chr2L_7075001 RAL-832 129 chr2L 7111741 7111774 chr2L 7111845 7111870 6 101 1.0 0.0 0.5 4.0 129 chr2L 7111741 intron Pvf3 - chr2L 7111806 intron Pvf3 - chr2L 7111870 intron Pvf3 - chr2L_6_7110001 chr2L_7110001 RAL-832 130 chr2L 7125784 7125801 chr2L 7125909 7125926 6 130 7.0 4.5 5.8 0.9 142 chr2L 7125784 intron Pvf3 - chr2L 7125855 intron Pvf3 - chr2L 7125926 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-832 131 chr2L 7151817 7151850 chr2L 7152132 7152165 5 311 3.0 4.5 3.8 1.0 348 chr2L 7151817 intron Pvf3 - chr2L 7151991 intron Pvf3 - chr2L 7152165 intron Pvf3 - chr2L_5_7150001 chr2L_7150001 RAL-832 132 chr2L 7197983 7198017 chr2L 7198075 7198116 12 94 0.5 4.5 2.5 3.4 133 chr2L 7197983 intron CG4502 - chr2L 7198050 intron CG4502 - chr2L 7198116 intron CG4502 - chr2L_12_7195001 chr2L_7195001 RAL-832 133 chr2L 7254519 7254543 chr2L 7254612 7254637 8 94 0.0 5.5 2.8 2.1 118 chr2L 7254519 intergenic not near genes chr2L 7254578 intergenic not near genes chr2L 7254637 intergenic not near genes chr2L_8_7250001 chr2L_7250001 RAL-832 134 chr2L 7258500 7258514 chr2L 7258675 7258709 4 184 3.0 2.5 2.8 1.1 209 chr2L 7258500 intron Wnt4 - chr2L 7258604 intron Wnt4 - chr2L 7258709 intron Wnt4 - chr2L_4_7255001 chr2L_7255001 RAL-832 135 chr2L 7295980 7296024 chr2L 7296138 7296184 4 160 0.5 2.5 1.5 1.6 204 chr2L 7295980 intergenic not near genes chr2L 7296082 intergenic not near genes chr2L 7296184 intergenic not near genes chr2L_4_7295001 chr2L_7295001 RAL-832 136 chr2L 7330254 7330262 chr2L 7330353 7330361 4 99 8.0 3.5 5.8 0.6 107 chr2L 7330254 intergenic not near genes chr2L 7330308 intergenic not near genes chr2L 7330361 intergenic not near genes chr2L_4_7330001 chr2L_7330001 RAL-832 137 chr2L 7335185 7335235 chr2L 7335302 7335352 6 116 3.0 0.5 1.8 2.1 167 chr2L 7335185 intron Wnt6 + chr2L 7335268 intron Wnt6 + chr2L 7335352 intron Wnt6 + chr2L_6_7335001 chr2L_7335001 RAL-832 138 chr2L 7351035 7351062 chr2L 7351156 7351190 5 122 1.5 0.0 0.8 2.8 155 chr2L 7351035 intron Wnt6 + chr2L 7351112 intron Wnt6 + chr2L 7351190 exon Wnt6 + chr2L_5_7350001 chr2L_7350001 RAL-832 139 chr2L 7436193 7436217 chr2L 7436307 7436331 11 113 2.5 0.5 1.5 4.4 138 chr2L 7436193 intergenic not near genes chr2L 7436262 intergenic not near genes chr2L 7436331 intergenic not near genes chr2L_11_7435001 chr2L_7435001 RAL-832 140 chr2L 7487294 7487328 chr2L 7487373 7487389 6 75 3.0 2.0 2.5 1.7 95 chr2L 7487294 intron Ziz - chr2L 7487342 intron Ziz - chr2L 7487389 intron Ziz - chr2L_6_7485001 chr2L_7485001 RAL-832 141 chr2L 7489685 7489727 chr2L 7489793 7489819 10 106 3.5 5.0 4.2 1.9 134 chr2L 7489685 intron Ziz - chr2L 7489752 intron Ziz - chr2L 7489819 intron Ziz - chr2L_10_7485001 chr2L_7485001 RAL-832 142 chr2L 7502744 7502770 chr2L 7502812 7502860 12 78 3.0 4.0 3.5 2.7 116 chr2L 7502744 intron RapGAP1 - chr2L 7502802 intron RapGAP1 - chr2L 7502860 intron RapGAP1 - chr2L_12_7500001 chr2L_7500001 RAL-832 143 chr2L 7516183 7516194 chr2L 7516251 7516260 4 80 1.0 1.5 1.2 1.8 77 chr2L 7516183 intron RapGAP1 - chr2L 7516222 intron RapGAP1 - chr2L 7516260 intron RapGAP1 - chr2L_4_7515001 chr2L_7515001 RAL-832 144 chr2L 7555200 7555224 chr2L 7555292 7555311 7 91 0.5 1.0 0.8 3.9 111 chr2L 7555200 intron RapGAP1 - chr2L 7555256 intron RapGAP1 - chr2L 7555311 intron RapGAP1 - chr2L_7_7555001 chr2L_7555001 RAL-832 145 chr2L 7704157 7704169 chr2L 7704234 7704253 4 85 2.5 1.5 2.0 1.3 96 chr2L 7704157 intron Tep3 + chr2L 7704205 intron Tep3 + chr2L 7704253 intron Tep3 + chr2L_4_7700001 chr2L_7700001 RAL-832 146 chr2L 7867554 7867596 chr2L 7867663 7867694 16 107 2.0 5.0 3.5 3.6 140 chr2L 7867554 intron Proc - chr2L 7867624 intron Proc - chr2L 7867694 intron Proc - chr2L_16_7865001 chr2L_7865001 RAL-832 147 chr2L 7959027 7959056 chr2L 7960458 7960487 pogo 9 1426 6.0 3.0 4.5 1.6 1460 chr2L 7959027 intron Snoo - chr2L 7959757 intron Snoo - chr2L 7960487 intron Snoo - chr2L_9_7955001 chr2L_7955001 RAL-832 148 chr2L 7986908 7986914 chr2L 7987014 7987020 5 106 3.5 5.0 4.2 1.0 112 chr2L 7986908 3` UTR pes - chr2L 7986964 3` UTR pes - chr2L 7987020 3` UTR pes - chr2L_5_7985001 chr2L_7985001 RAL-832 149 chr2L 8044095 8044125 chr2L 8044176 8044207 11 86 0.0 1.5 0.8 6.1 112 chr2L 8044095 intron CG7466 + chr2L 8044151 intron CG7466 + chr2L 8044207 intron CG7466 + chr2L_11_8040001 chr2L_8040001 RAL-832 150 chr2L 8166049 8166060 chr2L 8166131 8166151 5 98 3.5 2.0 2.8 1.3 102 chr2L 8166049 intron Piezo + chr2L 8166100 intron Piezo + chr2L 8166151 intron Piezo + chr2L_5_8165001 chr2L_8165001 RAL-832 151 chr2L 8171278 8171297 chr2L 8171379 8171398 7 98 0.0 11.0 5.5 1.1 120 chr2L 8171278 intron Piezo + chr2L 8171338 intron Piezo + chr2L 8171398 intron Piezo + chr2L_7_8170001 chr2L_8170001 RAL-832 152 chr2L 8231954 8232024 chr2L 8232082 8232122 6 118 0.0 4.5 2.2 1.9 168 chr2L 8231954 intron Pvr - chr2L 8232038 intron Pvr - chr2L 8232122 intron Pvr - chr2L_6_8230001 chr2L_8230001 RAL-832 153 chr2L 8452422 8452441 chr2L 8461592 8461612 roo 10 9180 3.5 7.0 5.2 1.6 9190 chr2L 8452422 intron fu12 - chr2L 8457017 intron fu12 - chr2L 8461612 intron fu12 - chr2L_10_8455001 chr2L_8455001 RAL-832 154 chr2L 8498185 8498236 chr2L 8498286 8498337 17 96 0.5 2.0 1.2 7.7 152 chr2L 8498185 intron Dh31 - chr2L 8498261 intron Dh31 - chr2L 8498337 intron Dh31 - chr2L_17_8495001 chr2L_8495001 RAL-832 155 chr2L 8554355 8554391 chr2L 8554461 8554505 8 112 1.5 2.5 2.0 2.7 150 chr2L 8554355 intron Sema-1a + chr2L 8554430 intron Sema-1a + chr2L 8554505 intron Sema-1a + chr2L_8_8550001 chr2L_8550001 RAL-832 156 chr2L 8594446 8594496 chr2L 8601520 8601570 297 9 7071 5.5 0.0 2.8 2.4 7124 chr2L 8594446 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598008 intron Sema-1a + chr2L 8601570 intron Sema-1a + chr2L_9_8595001 chr2L_8595001 RAL-832 157 chr2L 8605948 8605996 chr2L 8606044 8606065 11 86 3.0 2.0 2.5 3.1 117 chr2L 8605948 intron Sema-1a + chr2L 8606006 intron Sema-1a + chr2L 8606065 intron Sema-1a + chr2L_11_8605001 chr2L_8605001 RAL-832 158 chr2L 8612840 8612870 chr2L 8612937 8612967 13 89 3.0 6.0 4.5 2.4 127 chr2L 8612840 intron Sema-1a + chr2L 8612904 intron Sema-1a + chr2L 8612967 intron Sema-1a + chr2L_13_8610001 chr2L_8610001 RAL-832 159 chr2L 8723103 8723138 chr2L 8731491 8731523 Tirant 9 8389 2.0 4.0 3.0 2.2 8420 chr2L 8723103 intron raw - chr2L 8727313 intron raw - chr2L 8731523 intron raw - chr2L_9_8725001 chr2L_8725001 RAL-832 160 chr2L 8772786 8772819 chr2L 8772875 8772923 6 99 3.5 0.0 1.8 2.1 137 chr2L 8772786 intergenic CG9466 -,CG9465 - chr2L 8772854 intergenic CG9466 - chr2L 8772923 intergenic CG9466 - chr2L_6_8770001 chr2L_8770001 RAL-832 161 chr2L 8788755 8788765 chr2L 8788856 8788876 5 109 2.5 4.5 3.5 1.1 121 chr2L 8788755 intergenic not near genes chr2L 8788816 intergenic not near genes chr2L 8788876 intergenic not near genes chr2L_5_8785001 chr2L_8785001 RAL-832 162 chr2L 8788767 8788785 chr2L 8788843 8788896 6 98 0.0 3.0 1.5 2.4 129 chr2L 8788767 intergenic not near genes chr2L 8788832 intergenic not near genes chr2L 8788896 intergenic not near genes chr2L_6_8785001 chr2L_8785001 RAL-832 163 chr2L 8799781 8799829 chr2L 8799917 8799927 11 118 4.0 5.5 4.8 1.9 146 chr2L 8799781 intergenic not near genes chr2L 8799854 intergenic not near genes chr2L 8799927 intergenic not near genes chr2L_11_8795001 chr2L_8795001 RAL-832 164 chr2L 8956212 8956242 chr2L 8956309 8956314 6 90 3.0 3.0 3.0 1.5 102 chr2L 8956212 intron CG31886 - chr2L 8956263 intron CG31886 - chr2L 8956314 intron CG31886 - chr2L_6_8955001 chr2L_8955001 RAL-832 165 chr2L 9158784 9158791 chr2L 9158890 9158892 4 110 5.5 1.0 3.2 1.0 108 chr2L 9158784 intron CG32982 + chr2L 9158838 intron CG32982 + chr2L 9158892 intron CG32982 + chr2L_4_9155001 chr2L_9155001 RAL-832 166 chr2L 9217976 9218004 chr2L 9222782 9222819 Doc 5 4808 3.0 0.0 1.5 2.0 4843 chr2L 9217976 intron tai + chr2L 9220398 intron tai + chr2L 9222819 intron tai + chr2L_5_9220001 chr2L_9220001 RAL-832 167 chr2L 9251125 9251177 chr2L 9251242 9251269 6 110 6.5 2.5 4.5 1.1 144 chr2L 9251125 intergenic aust -,borr - chr2L 9251197 intergenic aust -,borr - chr2L 9251269 intergenic borr -,aust - chr2L_6_9250001 chr2L_9250001 RAL-832 168 chr2L 9297357 9297403 chr2L 9297454 9297500 13 93 2.5 2.0 2.2 4.1 143 chr2L 9297357 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297500 3` UTR Ggamma30A + chr2L_13_9295001 chr2L_9295001 RAL-832 169 chr2L 9304488 9304501 chr2L 9304587 9304595 4 98 4.5 5.0 4.8 0.7 107 chr2L 9304488 3` UTR CR42844 - chr2L 9304542 3` UTR CR42844 - chr2L 9304595 3` UTR CR42844 - chr2L_4_9300001 chr2L_9300001 RAL-832 170 chr2L 9335009 9335044 chr2L 9335092 9335117 8 88 2.5 5.5 4.0 1.6 108 chr2L 9335009 intron Eaat1 + chr2L 9335063 intron Eaat1 + chr2L 9335117 intron Eaat1 + chr2L_8_9335001 chr2L_9335001 RAL-832 171 chr2L 9380275 9380320 chr2L 9380383 9380417 10 99 2.0 2.0 2.0 3.3 142 chr2L 9380275 intron Shawl - chr2L 9380346 intron Shawl - chr2L 9380417 intron Shawl - chr2L_10_9380001 chr2L_9380001 RAL-832 172 chr2L 9393483 9393531 chr2L 9396470 9396508 jockey 10 2982 4.0 3.0 3.5 2.2 3025 chr2L 9393483 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396508 intron Shawl - chr2L_10_9390001 chr2L_9390001 RAL-832 173 chr2L 9439605 9439646 chr2L 9439703 9439744 7 92 2.0 0.0 1.0 3.5 139 chr2L 9439605 intron numb + chr2L 9439674 intron numb + chr2L 9439744 intron numb + chr2L_7_9435001 chr2L_9435001 RAL-832 174 chr2L 9439935 9439957 chr2L 9440034 9440066 5 102 6.0 6.5 6.2 0.7 131 chr2L 9439935 intron numb + chr2L 9440000 intron numb + chr2L 9440066 intron,exon numb +,CG33723 - chr2L_5_9435001 chr2L_9435001 RAL-832 175 chr2L 9454958 9454988 chr2L 9455080 9455084 8 116 7.0 0.0 3.5 1.8 126 chr2L 9454958 intron numb + chr2L 9455021 intron numb + chr2L 9455084 intron numb + chr2L_8_9455001 chr2L_9455001 RAL-832 176 chr2L 9474764 9474807 chr2L 9474878 9474921 10 111 0.0 5.0 2.5 2.9 157 chr2L 9474764 intergenic not near genes chr2L 9474842 intergenic not near genes chr2L 9474921 intergenic not near genes chr2L_10_9470001 chr2L_9470001 RAL-832 177 chr2L 9506415 9506445 chr2L 9506585 9506610 5 163 5.0 1.5 3.2 1.2 195 chr2L 9506415 intron CG33298 + chr2L 9506512 intron CG33298 + chr2L 9506610 intron CG33298 + chr2L_5_9505001 chr2L_9505001 RAL-832 178 chr2L 9620783 9620837 chr2L 9620886 9620936 8 102 1.0 0.0 0.5 5.3 153 chr2L 9620783 intron GlcAT-S + chr2L 9620860 intron GlcAT-S + chr2L 9620936 intron GlcAT-S + chr2L_8_9620001 chr2L_9620001 RAL-832 179 chr2L 9730971 9730981 chr2L 9731072 9731084 5 101 11.0 5.5 8.2 0.5 113 chr2L 9730971 intron Nckx30C - chr2L 9731028 intron Nckx30C - chr2L 9731084 intron Nckx30C - chr2L_5_9730001 chr2L_9730001 RAL-832 180 chr2L 9730982 9730994 chr2L 9731062 9731080 6 92 6.5 4.0 5.2 1.0 98 chr2L 9730982 intron Nckx30C - chr2L 9731031 intron Nckx30C - chr2L 9731080 intron Nckx30C - chr2L_6_9730001 chr2L_9730001 RAL-832 181 chr2L 9730995 9731005 chr2L 9731060 9731096 9 92 4.0 3.5 3.8 1.9 101 chr2L 9730995 intron Nckx30C - chr2L 9731046 intron Nckx30C - chr2L 9731096 intron Nckx30C - chr2L_9_9730001 chr2L_9730001 RAL-832 182 chr2L 9829591 9829594 chr2L 9829780 9829785 4 205 2.0 4.0 3.0 1.0 194 chr2L 9829591 intron nAChRalpha6 - chr2L 9829688 intron nAChRalpha6 - chr2L 9829785 intron nAChRalpha6 - chr2L_4_9825001 chr2L_9825001 RAL-832 183 chr2L 9862350 9862352 chr2L 9862466 9862467 4 122 0.0 3.0 1.5 1.6 117 chr2L 9862350 intron nAChRalpha6 - chr2L 9862408 intron nAChRalpha6 - chr2L 9862467 intron nAChRalpha6 - chr2L_4_9860001 chr2L_9860001 RAL-832 184 chr2L 9892490 9892535 chr2L 9892586 9892631 11 93 1.5 3.0 2.2 3.4 141 chr2L 9892490 intron mtDNA-helicase - chr2L 9892560 intron mtDNA-helicase - chr2L 9892631 exon mtDNA-helicase - chr2L_11_9890001 chr2L_9890001 RAL-832 185 chr2L 9982013 9982230 chr2L 9982112 9982353 14 116 0.0 0.0 0.0 14.0 340 chr2L 9982013 intergenic not near genes chr2L 9982183 intergenic not near genes chr2L 9982353 intergenic not near genes chr2L_14_9980001 chr2L_9980001 RAL-832 186 chr2L 10032071 10032121 chr2L 10032176 10032226 10 98 2.5 5.5 4.0 2.0 155 chr2L 10032071 intergenic not near genes chr2L 10032148 intergenic not near genes chr2L 10032226 intergenic obst-B + chr2L_10_10030001 chr2L_10030001 RAL-832 187 chr2L 10209836 10209854 chr2L 10209933 10209941 6 95 10.0 0.0 5.0 1.0 105 chr2L 10209836 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209888 3` UTR CG5727 - chr2L 10209941 3` UTR CG5727 - chr2L_6_10205001 chr2L_10205001 RAL-832 188 chr2L 10232918 10232941 chr2L 10233016 10233019 4 88 4.0 8.0 6.0 0.6 101 chr2L 10232918 intron eEF1delta + chr2L 10232968 intron eEF1delta + chr2L 10233019 intron eEF1delta + chr2L_4_10230001 chr2L_10230001 RAL-832 189 chr2L 10294655 10294690 chr2L 10294761 10294786 9 104 5.0 3.5 4.2 1.7 131 chr2L 10294655 intron Hand - chr2L 10294720 intron Hand - chr2L 10294786 intron Hand - chr2L_9_10290001 chr2L_10290001 RAL-832 190 chr2L 10348367 10348409 chr2L 10348470 10348512 5 103 2.5 0.5 1.5 2.0 145 chr2L 10348367 intron CG34367 - chr2L 10348440 intron CG34367 - chr2L 10348512 intron CG34367 - chr2L_5_10345001 chr2L_10345001 RAL-832 191 chr2L 10458200 10458217 chr2L 10458316 10458333 6 116 0.5 2.5 1.5 2.4 133 chr2L 10458200 intron LM408 + chr2L 10458266 intron LM408 + chr2L 10458333 intron LM408 + chr2L_6_10455001 chr2L_10455001 RAL-832 192 chr2L 10474383 10474404 chr2L 10474470 10474485 6 84 3.0 3.5 3.2 1.4 102 chr2L 10474383 intergenic RluA-1 - chr2L 10474434 intergenic RluA-1 - chr2L 10474485 intergenic RluA-1 - chr2L_6_10470001 chr2L_10470001 RAL-832 193 chr2L 10515368 10515390 chr2L 10515454 10515503 11 105 5.0 3.5 4.2 2.1 135 chr2L 10515368 intron,intron CG45083 -,Fatp - chr2L 10515436 intron,intron CG45083 -,Fatp - chr2L 10515503 intron,intron CG45083 -,Fatp - chr2L_11_10515001 chr2L_10515001 RAL-832 194 chr2L 10531591 10531606 chr2L 10531703 10531718 4 112 3.0 0.0 1.5 1.6 127 chr2L 10531591 3` UTR Lip4 + chr2L 10531654 3` UTR Lip4 + chr2L 10531718 3` UTR Lip4 + chr2L_4_10530001 chr2L_10530001 RAL-832 195 chr2L 10592851 10592872 chr2L 10600506 10600526 opus 5 7658 0.5 1.5 1.0 2.5 7675 chr2L 10592851 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600526 intron Trim9 + chr2L_5_10595001 chr2L_10595001 RAL-832 196 chr2L 10604187 10604220 chr2L 10604279 10604317 10 98 5.0 1.5 3.2 2.4 130 chr2L 10604187 intron Trim9 + chr2L 10604252 intron Trim9 + chr2L 10604317 intron Trim9 + chr2L_10_10600001 chr2L_10600001 RAL-832 197 chr2L 10688542 10688574 chr2L 10688622 10688670 12 94 1.5 3.5 2.5 3.4 128 chr2L 10688542 intergenic CG7294 - chr2L 10688606 intergenic CG7294 - chr2L 10688670 intergenic CG7294 - chr2L_12_10685001 chr2L_10685001 RAL-832 198 chr2L 10803772 10803801 chr2L 10803878 10803897 10 104 1.5 7.0 4.2 1.9 125 chr2L 10803772 intergenic not near genes chr2L 10803834 intergenic Nos - chr2L 10803897 intergenic Nos - chr2L_10_10800001 chr2L_10800001 RAL-832 199 chr2L 10852157 10852182 chr2L 10852266 10852283 9 105 0.0 7.5 3.8 1.9 126 chr2L 10852157 intron CG43129 + chr2L 10852220 intron CG43129 + chr2L 10852283 intron CG43129 + chr2L_9_10850001 chr2L_10850001 RAL-832 200 chr2L 10905623 10905631 chr2L 10905703 10905738 4 100 0.0 3.0 1.5 1.6 115 chr2L 10905623 intergenic not near genes chr2L 10905680 intergenic not near genes chr2L 10905738 intergenic not near genes chr2L_4_10905001 chr2L_10905001 RAL-832 201 chr2L 10914820 10914823 chr2L 10914893 10914934 7 99 2.5 2.5 2.5 2.0 114 chr2L 10914820 intergenic not near genes chr2L 10914877 intergenic not near genes chr2L 10914934 intergenic not near genes chr2L_7_10910001 chr2L_10910001 RAL-832 202 chr2L 10945051 10945088 chr2L 10945329 10945367 6 277 2.0 3.0 2.5 1.7 316 chr2L 10945051 intron dpr2 - chr2L 10945209 intron dpr2 - chr2L 10945367 intron dpr2 - chr2L_6_10945001 chr2L_10945001 RAL-832 203 chr2L 11224050 11224088 chr2L 11224181 11224219 7 131 3.0 3.5 3.2 1.7 169 chr2L 11224050 intron ab + chr2L 11224134 intron ab + chr2L 11224219 intron ab + chr2L_7_11220001 chr2L_11220001 RAL-832 204 chr2L 11292367 11292399 chr2L 11292469 11292486 12 96 5.5 7.0 6.2 1.7 119 chr2L 11292367 intergenic not near genes chr2L 11292426 intergenic not near genes chr2L 11292486 intergenic not near genes chr2L_12_11290001 chr2L_11290001 RAL-832 205 chr2L 11293712 11293744 chr2L 11293869 11293901 9 150 2.5 2.0 2.2 2.8 189 chr2L 11293712 intergenic not near genes chr2L 11293806 intergenic not near genes chr2L 11293901 intergenic not near genes chr2L_9_11290001 chr2L_11290001 RAL-832 206 chr2L 11357957 11358009 chr2L 11358055 11358107 20 94 6.0 3.5 4.8 3.4 150 chr2L 11357957 intergenic not near genes chr2L 11358032 intergenic not near genes chr2L 11358107 intergenic not near genes chr2L_20_11355001 chr2L_11355001 RAL-832 207 chr2L 11413271 11413321 chr2L 11413415 11413450 11 140 2.0 3.5 2.8 2.9 179 chr2L 11413271 intergenic not near genes chr2L 11413360 intergenic not near genes chr2L 11413450 intergenic not near genes chr2L_11_11410001 chr2L_11410001 RAL-832 208 chr2L 11450107 11450154 chr2L 11450213 11450256 6 105 0.0 1.5 0.8 3.3 149 chr2L 11450107 intergenic not near genes chr2L 11450182 intergenic not near genes chr2L 11450256 intergenic not near genes chr2L_6_11450001 chr2L_11450001 RAL-832 209 chr2L 11537750 11537775 chr2L 11537877 11537892 11 132 3.0 4.0 3.5 2.4 142 chr2L 11537750 intergenic not near genes chr2L 11537821 intergenic not near genes chr2L 11537892 intergenic not near genes chr2L_11_11535001 chr2L_11535001 RAL-832 210 chr2L 11563647 11563667 chr2L 11568849 11568881 copia 5 5213 0.5 6.0 3.2 1.2 5234 chr2L 11563647 intergenic not near genes chr2L 11566264 intergenic not near genes chr2L 11568881 intergenic not near genes chr2L_5_11565001 chr2L_11565001 RAL-832 211 chr2L 11612664 11612698 chr2L 11612771 11612806 6 101 1.5 4.0 2.8 1.6 142 chr2L 11612664 intron kek2 + chr2L 11612735 intron kek2 + chr2L 11612806 intron kek2 + chr2L_6_11610001 chr2L_11610001 RAL-832 212 chr2L 11661192 11661201 chr2L 11661272 11661309 4 101 2.0 2.0 2.0 1.3 117 chr2L 11661192 intergenic CR44497 -,CR44479 - chr2L 11661250 intergenic CR44497 -,CR44479 - chr2L 11661309 intergenic CR44497 -,CR44479 - chr2L_4_11660001 chr2L_11660001 RAL-832 213 chr2L 11672118 11672167 chr2L 11672243 11672294 7 127 2.0 1.5 1.8 2.5 176 chr2L 11672118 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672294 intergenic not near genes chr2L_7_11670001 chr2L_11670001 RAL-832 214 chr2L 11820433 11820458 chr2L 11820524 11820559 12 98 2.0 6.5 4.2 2.3 126 chr2L 11820433 intron Pde1c - chr2L 11820496 intron Pde1c - chr2L 11820559 intron Pde1c - chr2L_12_11820001 chr2L_11820001 RAL-832 215 chr2L 11841332 11841351 chr2L 11841449 11841463 7 114 4.5 0.0 2.2 2.2 131 chr2L 11841332 intron Pde1c - chr2L 11841398 intron Pde1c - chr2L 11841463 intron Pde1c - chr2L_7_11840001 chr2L_11840001 RAL-832 216 chr2L 11862344 11862388 chr2L 11862457 11862491 23 109 3.5 3.5 3.5 5.1 147 chr2L 11862344 intron Pde1c - chr2L 11862418 intron Pde1c - chr2L 11862491 intron Pde1c - chr2L_23_11860001 chr2L_11860001 RAL-832 217 chr2L 11906684 11906730 chr2L 11906803 11906830 11 111 2.5 5.5 4.0 2.2 146 chr2L 11906684 intron Pde1c - chr2L 11906757 intron Pde1c - chr2L 11906830 intron Pde1c - chr2L_11_11905001 chr2L_11905001 RAL-832 218 chr2L 11951949 11951995 chr2L 11952057 11952088 9 105 4.5 4.0 4.2 1.7 139 chr2L 11951949 intergenic CR43314 - chr2L 11952018 intergenic CR43314 - chr2L 11952088 intergenic CR43314 - chr2L_9_11950001 chr2L_11950001 RAL-832 219 chr2L 12031378 12031407 chr2L 12031469 12031487 13 97 2.5 5.0 3.8 2.7 109 chr2L 12031378 intron dmGlut + chr2L 12031432 intron dmGlut + chr2L 12031487 intron dmGlut + chr2L_13_12030001 chr2L_12030001 RAL-832 220 chr2L 12067315 12067353 chr2L 12074387 12074419 297 11 7069 5.0 3.5 4.2 2.1 7104 chr2L 12067315 intergenic not near genes chr2L 12070867 intergenic not near genes chr2L 12074419 intergenic not near genes chr2L_11_12070001 chr2L_12070001 RAL-832 221 chr2L 12112029 12112041 chr2L 12112150 12112172 5 124 0.0 11.5 5.8 0.7 143 chr2L 12112029 3` UTR Phae2 + chr2L 12112100 3` UTR Phae2 + chr2L 12112172 3` UTR Phae2 + chr2L_5_12110001 chr2L_12110001 RAL-832 222 chr2L 12131458 12131494 chr2L 12131564 12131610 10 114 6.5 3.0 4.8 1.7 152 chr2L 12131458 intron rho-6 - chr2L 12131534 intron rho-6 - chr2L 12131610 intron rho-6 - chr2L_10_12130001 chr2L_12130001 RAL-832 223 chr2L 12132704 12132746 chr2L 12132809 12132852 11 104 0.0 5.0 2.5 3.1 148 chr2L 12132704 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132852 intron rho-6 - chr2L_11_12130001 chr2L_12130001 RAL-832 224 chr2L 12175837 12175844 chr2L 12175933 12175946 5 100 0.5 0.0 0.2 4.2 109 chr2L 12175837 intron,intron aret +,atilla - chr2L 12175892 intron,intron aret +,atilla - chr2L 12175946 intron,intron aret +,atilla - chr2L_5_12175001 chr2L_12175001 RAL-832 225 chr2L 12229585 12229609 chr2L 12229671 12229706 13 91 1.5 2.5 2.0 4.3 121 chr2L 12229585 intron aret + chr2L 12229646 intron aret + chr2L 12229706 intron aret + chr2L_13_12225001 chr2L_12225001 RAL-832 226 chr2L 12366848 12366892 chr2L 12366954 12366998 11 103 5.5 2.5 4.0 2.2 150 chr2L 12366848 intron bru-2 + chr2L 12366923 intron bru-2 + chr2L 12366998 intron bru-2 + chr2L_11_12365001 chr2L_12365001 RAL-832 227 chr2L 12410992 12411010 chr2L 12411091 12411109 6 99 9.0 0.5 4.8 1.0 117 chr2L 12410992 intron vir-1 - chr2L 12411050 intron vir-1 - chr2L 12411109 intron vir-1 - chr2L_6_12410001 chr2L_12410001 RAL-832 228 chr2L 12411016 12411038 chr2L 12411085 12411138 5 84 3.0 0.5 1.8 1.8 122 chr2L 12411016 intron vir-1 - chr2L 12411077 intron vir-1 - chr2L 12411138 intron vir-1 - chr2L_5_12410001 chr2L_12410001 RAL-832 229 chr2L 12420952 12421000 chr2L 12421303 12421345 7 349 2.0 0.5 1.2 3.2 393 chr2L 12420952 intron vir-1 - chr2L 12421148 intron vir-1 - chr2L 12421345 intron vir-1 - chr2L_7_12420001 chr2L_12420001 RAL-832 230 chr2L 12424352 12424380 chr2L 12424447 12424464 4 93 0.0 4.0 2.0 1.3 112 chr2L 12424352 intergenic not near genes chr2L 12424408 intergenic CG6405 + chr2L 12424464 intergenic CG6405 + chr2L_4_12420001 chr2L_12420001 RAL-832 231 chr2L 12529242 12529258 chr2L 12529381 12529420 8 160 3.5 7.5 5.5 1.2 178 chr2L 12529242 intron bun - chr2L 12529331 intron bun - chr2L 12529420 intron bun - chr2L_8_12525001 chr2L_12525001 RAL-832 232 chr2L 12558305 12558346 chr2L 12565454 12565478 HMS-Beagle 5 7136 0.5 2.0 1.2 2.3 7173 chr2L 12558305 intergenic not near genes chr2L 12561892 intergenic not near genes chr2L 12565478 intergenic not near genes chr2L_5_12560001 chr2L_12560001 RAL-832 233 chr2L 12731040 12731064 chr2L 12735827 12735851 F-element 5 4787 4.5 2.0 3.2 1.2 4811 chr2L 12731040 intron MRP + chr2L 12733446 intron MRP + chr2L 12735851 intron MRP + chr2L_5_12730001 chr2L_12730001 RAL-832 234 chr2L 12731066 12731082 chr2L 12735826 12735869 F-element 4 4774 4.5 2.0 3.2 1.0 4803 chr2L 12731066 intron MRP + chr2L 12733468 intron MRP + chr2L 12735869 intron MRP + chr2L_4_12730001 chr2L_12730001 RAL-832 235 chr2L 12739161 12739204 chr2L 12743956 12743995 Doc 9 4795 2.0 6.0 4.0 1.8 4834 chr2L 12739161 exon MRP + chr2L 12741578 intron MRP + chr2L 12743995 exon MRP + chr2L_9_12740001 chr2L_12740001 RAL-832 236 chr2L 12763865 12763871 chr2L 12764063 12764083 BS 4 204 0.0 1.0 0.5 2.7 218 chr2L 12763865 intergenic not near genes chr2L 12763974 intergenic not near genes chr2L 12764083 intergenic not near genes chr2L_4_12760001 chr2L_12760001 RAL-832 237 chr2L 12781790 12781810 chr2L 12789248 12789252 Quasimodo 6 7456 5.5 6.5 6.0 0.9 7462 chr2L 12781790 intergenic not near genes chr2L 12785521 intergenic not near genes chr2L 12789252 intergenic not near genes chr2L_6_12785001 chr2L_12785001 RAL-832 238 chr2L 12791617 12791635 chr2L 12795290 12795305 F-element 6 3677 4.5 5.5 5.0 1.0 3688 chr2L 12791617 intergenic not near genes chr2L 12793461 intergenic not near genes chr2L 12795305 intergenic not near genes chr2L_6_12790001 chr2L_12790001 RAL-832 239 chr2L 12835539 12835585 chr2L 12835668 12835714 9 129 1.0 2.5 1.8 3.2 175 chr2L 12835539 intergenic not near genes chr2L 12835626 intergenic not near genes chr2L 12835714 intergenic not near genes chr2L_9_12835001 chr2L_12835001 RAL-832 240 chr2L 12905480 12905499 chr2L 12905567 12905603 4 100 3.0 3.5 3.2 1.0 123 chr2L 12905480 intergenic not near genes chr2L 12905542 intergenic not near genes chr2L 12905603 intergenic not near genes chr2L_4_12905001 chr2L_12905001 RAL-832 241 chr2L 12933828 12933870 chr2L 12941315 12941357 blood 7 7478 3.5 2.5 3.0 1.8 7529 chr2L 12933828 intergenic not near genes chr2L 12937592 intergenic not near genes chr2L 12941357 intergenic not near genes chr2L_7_12935001 chr2L_12935001 RAL-832 242 chr2L 13215369 13215412 chr2L 13215664 13215701 10 290 5.0 7.5 6.2 1.4 332 chr2L 13215369 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215535 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215701 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_10_13215001 chr2L_13215001 RAL-832 243 chr2L 13398709 13398749 chr2L 13398797 13398849 10 94 3.5 3.0 3.2 2.4 140 chr2L 13398709 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398779 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398849 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_10_13395001 chr2L_13395001 RAL-832 244 chr2L 13405628 13405680 chr2L 13410445 13410477 Doc 6 4807 1.0 3.5 2.2 1.9 4849 chr2L 13405628 exon CG7110 + chr2L 13408052 intron CG7110 + chr2L 13410477 intron CG7110 + chr2L_6_13405001 chr2L_13405001 RAL-832 245 chr2L 13435229 13435278 chr2L 13435391 13435430 8 158 3.0 1.5 2.2 2.5 201 chr2L 13435229 intron CG42784 + chr2L 13435330 intron CG42784 + chr2L 13435430 intron CG42784 + chr2L_8_13435001 chr2L_13435001 RAL-832 246 chr2L 13437348 13437374 chr2L 13437433 13437468 4 94 3.0 0.0 1.5 1.6 120 chr2L 13437348 intron,intron CG42784 +,Tehao + chr2L 13437408 intron,intron CG42784 +,Tehao + chr2L 13437468 intron,intron CG42784 +,Tehao + chr2L_4_13435001 chr2L_13435001 RAL-832 247 chr2L 13449446 13449483 chr2L 13456902 13456939 Quasimodo 14 7450 4.5 5.0 4.8 2.4 7493 chr2L 13449446 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453192 intron CG42784 + chr2L 13456939 intron CG42784 + chr2L_14_13450001 chr2L_13450001 RAL-832 248 chr2L 13560407 13560420 chr2L 13565218 13565261 F-element 8 4831 5.5 1.0 3.2 1.9 4854 chr2L 13560407 intron kuz + chr2L 13562834 intron kuz + chr2L 13565261 intron kuz + chr2L_8_13560001 chr2L_13560001 RAL-832 249 chr2L 13621624 13621636 chr2L 13621736 13621745 7 114 4.5 1.5 3.0 1.8 121 chr2L 13621624 intron kuz + chr2L 13621684 intron kuz + chr2L 13621745 intron kuz + chr2L_7_13620001 chr2L_13620001 RAL-832 250 chr2L 13701866 13701911 chr2L 13701966 13702005 12 91 5.5 4.5 5.0 2.0 139 chr2L 13701866 intron CG31814 - chr2L 13701936 intron CG31814 - chr2L 13702005 intron CG31814 - chr2L_12_13700001 chr2L_13700001 RAL-832 251 chr2L 13720221 13720245 chr2L 13720329 13720343 6 106 2.5 0.0 1.2 2.7 122 chr2L 13720221 intergenic not near genes chr2L 13720282 intergenic not near genes chr2L 13720343 intergenic not near genes chr2L_6_13720001 chr2L_13720001 RAL-832 252 chr2L 13761281 13761307 chr2L 13761372 13761402 9 99 4.0 0.5 2.2 2.8 121 chr2L 13761281 intron TM9SF4 + chr2L 13761342 intron TM9SF4 + chr2L 13761402 intron TM9SF4 + chr2L_9_13760001 chr2L_13760001 RAL-832 253 chr2L 13794698 13794728 chr2L 13794797 13794833 9 105 2.0 4.0 3.0 2.2 135 chr2L 13794698 intron Sec71 + chr2L 13794766 intron Sec71 + chr2L 13794833 intron Sec71 + chr2L_9_13790001 chr2L_13790001 RAL-832 254 chr2L 13853074 13853108 chr2L 13862243 13862264 roo 7 9163 2.0 7.5 4.8 1.2 9190 chr2L 13853074 intron CenG1A + chr2L 13857669 intron CenG1A + chr2L 13862264 intron CenG1A + chr2L_7_13855001 chr2L_13855001 RAL-832 255 chr2L 6616845 6616850 chr2L 13872882 13872887 4 7256037 19.0 7.5 13.2 0.3 7256042 chr2L 6616845 3` UTR CG11050 + chr2L 10244866 intron,intron chico -,CR44995 + chr2L 13872887 intron CenG1A + chr2L_4_10240001 chr2L_10240001 RAL-832 256 chr2L 13988264 13988297 chr2L 13988371 13988392 7 100 4.0 7.5 5.8 1.0 128 chr2L 13988264 intron rk - chr2L 13988328 intron rk - chr2L 13988392 intron rk - chr2L_7_13985001 chr2L_13985001 RAL-832 257 chr2L 14056801 14056839 chr2L 14056895 14056945 9 97 4.5 3.0 3.8 1.9 144 chr2L 14056801 intron nAChRalpha5 + chr2L 14056873 intron nAChRalpha5 + chr2L 14056945 intron nAChRalpha5 + chr2L_9_14055001 chr2L_14055001 RAL-832 258 chr2L 14109494 14109537 chr2L 14109605 14109648 14 109 1.5 3.0 2.2 4.4 154 chr2L 14109494 intergenic CG15293 -,CG31769 - chr2L 14109571 intergenic CG31769 -,CG15293 - chr2L 14109648 3` UTR CG31769 - chr2L_14_14105001 chr2L_14105001 RAL-832 259 chr2L 14160692 14160719 chr2L 14160783 14160824 10 99 2.0 8.5 5.2 1.6 132 chr2L 14160692 intergenic CG17341 +,CG43332 - chr2L 14160758 intergenic CG17341 +,CG43332 - chr2L 14160824 intergenic CG17341 +,CG43332 - chr2L_10_14160001 chr2L_14160001 RAL-832 260 chr2L 14180043 14180090 chr2L 14180139 14180181 7 90 4.5 4.5 4.5 1.3 138 chr2L 14180043 intron CG43333 - chr2L 14180112 intron CG43333 - chr2L 14180181 intron CG43333 - chr2L_7_14180001 chr2L_14180001 RAL-832 261 chr2L 14234418 14234462 chr2L 14234528 14234558 5 107 0.0 3.0 1.5 2.0 140 chr2L 14234418 intergenic Dyrk2 -,CR44727 + chr2L 14234488 intergenic CR44727 +,Dyrk2 - chr2L 14234558 intergenic CR44727 +,Dyrk2 - chr2L_5_14230001 chr2L_14230001 RAL-832 262 chr2L 14340511 14340553 chr2L 14340606 14340623 4 92 0.0 3.0 1.5 1.6 112 chr2L 14340511 intron CG33090 + chr2L 14340567 intron CG33090 + chr2L 14340623 intron CG33090 + chr2L_4_14340001 chr2L_14340001 RAL-832 263 chr2L 14369123 14369158 chr2L 14369244 14369273 6 126 0.0 3.0 1.5 2.4 150 chr2L 14369123 intergenic not near genes chr2L 14369198 intergenic not near genes chr2L 14369273 intergenic not near genes chr2L_6_14365001 chr2L_14365001 RAL-832 264 chr2L 14374766 14374772 chr2L 14374872 14374883 4 108 4.5 3.5 4.0 0.8 117 chr2L 14374766 intergenic not near genes chr2L 14374824 intergenic not near genes chr2L 14374883 intergenic not near genes chr2L_4_14370001 chr2L_14370001 RAL-832 265 chr2L 14374773 14374801 chr2L 14374869 14374912 12 103 1.5 3.0 2.2 3.8 139 chr2L 14374773 intergenic not near genes chr2L 14374842 intergenic not near genes chr2L 14374912 intergenic not near genes chr2L_12_14370001 chr2L_14370001 RAL-832 266 chr2L 14378628 14378672 chr2L 14378727 14378766 10 94 3.5 0.0 1.8 3.6 138 chr2L 14378628 3` UTR ppk - chr2L 14378697 3` UTR ppk - chr2L 14378766 3` UTR ppk - chr2L_10_14375001 chr2L_14375001 RAL-832 267 chr2L 14504309 14504360 chr2L 14504418 14504469 22 103 5.0 5.0 5.0 3.7 160 chr2L 14504309 intergenic not near genes chr2L 14504389 intergenic not near genes chr2L 14504469 intergenic not near genes chr2L_22_14500001 chr2L_14500001 RAL-832 268 chr2L 14524630 14524651 chr2L 14525114 14525145 5 503 1.5 3.5 2.5 1.4 515 chr2L 14524630 intron CG33648 + chr2L 14524888 intron CG33648 + chr2L 14525145 exon CG33648 + chr2L_5_14520001 chr2L_14520001 RAL-832 269 chr2L 14570707 14570719 chr2L 14570808 14570820 5 101 0.0 4.0 2.0 1.7 113 chr2L 14570707 intergenic not near genes chr2L 14570764 intergenic not near genes chr2L 14570820 intergenic not near genes chr2L_5_14570001 chr2L_14570001 RAL-832 270 chr2L 14588376 14588385 chr2L 14588538 14588558 6 170 4.5 2.5 3.5 1.3 182 chr2L 14588376 intergenic CG42680 - chr2L 14588467 intergenic CG42680 - chr2L 14588558 intergenic CG42680 - chr2L_6_14585001 chr2L_14585001 RAL-832 271 chr2L 14596929 14596967 chr2L 14597039 14597085 11 112 4.0 5.0 4.5 2.0 156 chr2L 14596929 intergenic not near genes chr2L 14597007 intergenic not near genes chr2L 14597085 intergenic not near genes chr2L_11_14595001 chr2L_14595001 RAL-832 272 chr2L 14621371 14621402 chr2L 14621479 14621522 5 106 1.5 0.5 1.0 2.5 151 chr2L 14621371 intron osp - chr2L 14621446 intron osp - chr2L 14621522 intron osp - chr2L_5_14620001 chr2L_14620001 RAL-832 273 chr2L 14624534 14624554 chr2L 14624633 14624653 11 99 4.5 4.0 4.2 2.1 119 chr2L 14624534 intron osp - chr2L 14624594 intron osp - chr2L 14624653 intron osp - chr2L_11_14620001 chr2L_14620001 RAL-832 274 chr2L 14642569 14642603 chr2L 14651734 14651786 roo 8 9175 3.0 5.5 4.2 1.5 9217 chr2L 14642569 intron osp - chr2L 14647178 intron osp - chr2L 14651786 intron osp - chr2L_8_14645001 chr2L_14645001 RAL-832 275 chr2L 14658925 14658953 chr2L 14659011 14659021 5 79 3.5 1.5 2.5 1.4 96 chr2L 14658925 intron osp - chr2L 14658973 intron osp - chr2L 14659021 intron osp - chr2L_5_14655001 chr2L_14655001 RAL-832 276 chr2L 14707210 14707232 chr2L 14707326 14707350 12 128 3.5 3.0 3.2 2.9 140 chr2L 14707210 intergenic not near genes chr2L 14707280 intergenic not near genes chr2L 14707350 intergenic not near genes chr2L_12_14705001 chr2L_14705001 RAL-832 277 chr2L 14769358 14769390 chr2L 14769525 14769569 13 169 2.0 1.5 1.8 4.6 211 chr2L 14769358 intergenic not near genes chr2L 14769464 intergenic not near genes chr2L 14769569 intergenic not near genes chr2L_13_14765001 chr2L_14765001 RAL-832 278 chr2L 14803877 14803909 chr2L 14809080 14809125 copia 7 5209 3.0 4.0 3.5 1.6 5248 chr2L 14803877 intergenic not near genes chr2L 14806501 intergenic not near genes chr2L 14809125 intergenic not near genes chr2L_7_14805001 chr2L_14805001 RAL-832 279 chr2L 14839735 14839750 chr2L 14839831 14839846 7 94 6.5 2.0 4.2 1.3 111 chr2L 14839735 intergenic not near genes chr2L 14839790 intergenic not near genes chr2L 14839846 intergenic not near genes chr2L_7_14835001 chr2L_14835001 RAL-832 280 chr2L 14839753 14839778 chr2L 14839827 14839874 13 92 3.0 2.0 2.5 3.7 121 chr2L 14839753 intergenic not near genes chr2L 14839814 intergenic not near genes chr2L 14839874 intergenic not near genes chr2L_13_14835001 chr2L_14835001 RAL-832 281 chr2L 14849263 14849307 chr2L 14849373 14849407 9 106 3.5 0.5 2.0 3.0 144 chr2L 14849263 intron CG15279 - chr2L 14849335 intron CG15279 - chr2L 14849407 intron CG15279 - chr2L_9_14845001 chr2L_14845001 RAL-832 282 chr2L 14887674 14887697 chr2L 14887772 14887795 8 98 3.0 4.0 3.5 1.8 121 chr2L 14887674 intergenic not near genes chr2L 14887734 intergenic not near genes chr2L 14887795 intergenic not near genes chr2L_8_14885001 chr2L_14885001 RAL-832 283 chr2L 14984382 14984402 chr2L 14991984 14992024 opus 10 7608 4.5 3.5 4.0 2.0 7642 chr2L 14984382 intron mol - chr2L 14988203 intron mol - chr2L 14992024 intron mol - chr2L_10_14985001 chr2L_14985001 RAL-832 284 chr2L 15013142 15013178 chr2L 15013260 15013306 4 125 0.5 5.5 3.0 1.0 164 chr2L 15013142 intergenic CR43856 - chr2L 15013224 intergenic not near genes chr2L 15013306 intergenic not near genes chr2L_4_15010001 chr2L_15010001 RAL-832 285 chr2L 15021420 15021472 chr2L 15021516 15021568 22 94 3.0 4.5 3.8 4.6 148 chr2L 15021420 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021568 intron GABA-B-R1 + chr2L_22_15020001 chr2L_15020001 RAL-832 286 chr2L 15031536 15031578 chr2L 15031796 15031806 6 248 3.5 1.5 2.5 1.7 270 chr2L 15031536 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031671 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031806 intron GABA-B-R1 + chr2L_6_15030001 chr2L_15030001 RAL-832 287 chr2L 15044715 15044721 chr2L 15044798 15044817 4 92 8.0 0.0 4.0 0.8 102 chr2L 15044715 intergenic ck - chr2L 15044766 intergenic ck - chr2L 15044817 intergenic ck - chr2L_4_15040001 chr2L_15040001 RAL-832 288 chr2L 15044723 15044736 chr2L 15044797 15044816 5 86 2.5 0.0 1.2 2.3 93 chr2L 15044723 intergenic ck - chr2L 15044770 intergenic ck - chr2L 15044816 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-832 289 chr2L 15078067 15078098 chr2L 15078157 15078206 7 97 4.0 3.0 3.5 1.6 139 chr2L 15078067 intron CG15270 + chr2L 15078136 intron CG15270 + chr2L 15078206 intron CG15270 + chr2L_7_15075001 chr2L_15075001 RAL-832 290 chr2L 15108486 15108532 chr2L 15108649 15108688 8 162 2.0 3.0 2.5 2.3 202 chr2L 15108486 intergenic not near genes chr2L 15108587 intergenic not near genes chr2L 15108688 intergenic not near genes chr2L_8_15105001 chr2L_15105001 RAL-832 291 chr2L 15240201 15240249 chr2L 15240332 15240353 12 125 2.5 2.0 2.2 3.8 152 chr2L 15240201 intron ZnT35C - chr2L 15240277 intron ZnT35C - chr2L 15240353 intron ZnT35C - chr2L_12_15240001 chr2L_15240001 RAL-832 292 chr2L 15343517 15343545 chr2L 15343622 15343650 6 101 3.0 0.0 1.5 2.4 133 chr2L 15343517 intergenic not near genes chr2L 15343584 intergenic not near genes chr2L 15343650 intergenic not near genes chr2L_6_15340001 chr2L_15340001 RAL-832 293 chr2L 15350896 15350913 chr2L 15350990 15351017 5 100 0.5 1.5 1.0 2.5 121 chr2L 15350896 intergenic not near genes chr2L 15350956 intergenic not near genes chr2L 15351017 intergenic not near genes chr2L_5_15350001 chr2L_15350001 RAL-832 294 chr2L 15350915 15350931 chr2L 15350989 15351015 7 94 0.5 1.5 1.0 3.5 100 chr2L 15350915 intergenic not near genes chr2L 15350965 intergenic not near genes chr2L 15351015 intergenic not near genes chr2L_7_15350001 chr2L_15350001 RAL-832 295 chr2L 15375800 15375845 chr2L 15375932 15375977 22 130 4.0 1.5 2.8 5.8 177 chr2L 15375800 intergenic not near genes chr2L 15375888 intergenic not near genes chr2L 15375977 intergenic not near genes chr2L_22_15375001 chr2L_15375001 RAL-832 296 chr2L 15535898 15535917 chr2L 15535978 15536014 7 93 2.5 1.5 2.0 2.3 116 chr2L 15535898 intergenic not near genes chr2L 15535956 intergenic not near genes chr2L 15536014 intergenic not near genes chr2L_7_15535001 chr2L_15535001 RAL-832 297 chr2L 15586393 15586437 chr2L 15593465 15593509 297 18 7072 8.0 2.0 5.0 3.0 7116 chr2L 15586393 intergenic not near genes chr2L 15589951 intergenic not near genes chr2L 15593509 intergenic not near genes chr2L_18_15585001 chr2L_15585001 RAL-832 298 chr2L 15730872 15730891 chr2L 15730977 15730985 9 102 1.5 3.0 2.2 2.8 113 chr2L 15730872 intron CycE - chr2L 15730928 intron CycE - chr2L 15730985 intron CycE - chr2L_9_15730001 chr2L_15730001 RAL-832 299 chr2L 15790164 15790217 chr2L 15790260 15790309 11 93 7.0 5.0 6.0 1.6 145 chr2L 15790164 intergenic CG18109 + chr2L 15790236 intergenic CG18109 + chr2L 15790309 intergenic CG18109 + chr2L_11_15790001 chr2L_15790001 RAL-832 300 chr2L 15826878 15826893 chr2L 15829292 15829307 Tabor 5 2414 0.5 8.5 4.5 0.9 2429 chr2L 15826878 intergenic not near genes chr2L 15828092 intergenic not near genes chr2L 15829307 intergenic not near genes chr2L_5_15825001 chr2L_15825001 RAL-832 301 chr2L 15912408 15912432 chr2L 15912716 15912736 7 301 2.5 2.5 2.5 2.0 328 chr2L 15912408 intron beat-Ib - chr2L 15912572 intron,5` UTR beat-Ib -,CR44868 + chr2L 15912736 intron,5` UTR beat-Ib -,CR44868 + chr2L_7_15910001 chr2L_15910001 RAL-832 302 chr2L 15950377 15950411 chr2L 15950464 15950499 7 92 2.5 0.0 1.2 3.2 122 chr2L 15950377 intron beat-Ib - chr2L 15950438 intron beat-Ib - chr2L 15950499 intron beat-Ib - chr2L_7_15950001 chr2L_15950001 RAL-832 303 chr2L 15956019 15956055 chr2L 15957491 15957542 hobo 8 1475 8.0 5.5 6.8 1.0 1523 chr2L 15956019 intron beat-Ib - chr2L 15956780 intron beat-Ib - chr2L 15957542 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-832 304 chr2L 16027408 16027421 chr2L 16027484 16027517 4 90 2.5 8.0 5.2 0.6 109 chr2L 16027408 intron beat-Ic + chr2L 16027462 intron beat-Ic + chr2L 16027517 intron beat-Ic + chr2L_4_16025001 chr2L_16025001 RAL-832 305 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 7.5 12.0 9.8 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-832 306 chr2L 16098911 16098954 chr2L 16099011 16099026 13 99 3.5 6.5 5.0 2.2 115 chr2L 16098911 intergenic not near genes chr2L 16098968 intergenic not near genes chr2L 16099026 intergenic not near genes chr2L_13_16095001 chr2L_16095001 RAL-832 307 chr2L 16106536 16106582 chr2L 16106674 16106700 7 133 4.5 3.0 3.8 1.5 164 chr2L 16106536 intergenic not near genes chr2L 16106618 intergenic not near genes chr2L 16106700 intergenic not near genes chr2L_7_16105001 chr2L_16105001 RAL-832 308 chr2L 16123463 16123517 chr2L 16123565 16123610 14 98 1.5 2.5 2.0 4.7 147 chr2L 16123463 intergenic not near genes chr2L 16123536 intergenic not near genes chr2L 16123610 intergenic not near genes chr2L_14_16120001 chr2L_16120001 RAL-832 309 chr2L 16141165 16141179 chr2L 16146377 16146382 copia 4 5216 4.5 1.5 3.0 1.0 5217 chr2L 16141165 intergenic not near genes chr2L 16143774 intergenic not near genes chr2L 16146382 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-832 310 chr2L 16141182 16141191 chr2L 16146373 16146392 copia 5 5215 3.5 1.5 2.5 1.4 5210 chr2L 16141182 intergenic not near genes chr2L 16143787 intergenic not near genes chr2L 16146392 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-832 311 chr2L 16354759 16354770 chr2L 16354871 16354881 6 112 4.0 3.0 3.5 1.3 122 chr2L 16354759 intergenic CaBP1 -,CG4455 + chr2L 16354820 intergenic CaBP1 -,CG4455 + chr2L 16354881 intergenic CaBP1 -,CG4455 + chr2L_6_16350001 chr2L_16350001 RAL-832 312 chr2L 16354772 16354785 chr2L 16354867 16354887 6 99 2.0 3.0 2.5 1.7 115 chr2L 16354772 intergenic CaBP1 -,CG4455 + chr2L 16354830 intergenic CaBP1 -,CG4455 + chr2L 16354887 3` UTR CaBP1 - chr2L_6_16350001 chr2L_16350001 RAL-832 313 chr2L 16363922 16363962 chr2L 16364188 16364228 12 263 2.5 2.0 2.2 3.8 306 chr2L 16363922 intergenic not near genes chr2L 16364075 intergenic not near genes chr2L 16364228 intergenic not near genes chr2L_12_16360001 chr2L_16360001 RAL-832 314 chr2L 16504978 16505017 chr2L 16505099 16505135 11 121 0.0 4.5 2.2 3.4 157 chr2L 16504978 intron Tpr2 + chr2L 16505056 intron Tpr2 + chr2L 16505135 intron Tpr2 + chr2L_11_16505001 chr2L_16505001 RAL-832 315 chr2L 16511967 16511991 chr2L 16519114 16519138 HMS-Beagle 9 7144 3.0 6.5 4.8 1.6 7171 chr2L 16511967 intron CG5953 - chr2L 16515552 intron CG5953 - chr2L 16519138 intron CG5953 - chr2L_9_16515001 chr2L_16515001 RAL-832 316 chr2L 16589817 16589827 chr2L 16589911 16589931 5 103 4.5 4.5 4.5 0.9 114 chr2L 16589817 intron CG42389 + chr2L 16589874 intron CG42389 + chr2L 16589931 intron CG42389 + chr2L_5_16585001 chr2L_16585001 RAL-832 317 chr2L 16654686 16654735 chr2L 16654799 16654833 13 103 3.5 1.0 2.2 4.1 147 chr2L 16654686 intron CG42389 + chr2L 16654760 intron CG42389 + chr2L 16654833 intron CG42389 + chr2L_13_16650001 chr2L_16650001 RAL-832 318 chr2L 16670400 16670447 chr2L 16670497 16670519 10 93 1.0 5.0 3.0 2.5 119 chr2L 16670400 intron Trpgamma - chr2L 16670460 intron Trpgamma - chr2L 16670519 intron Trpgamma - chr2L_10_16670001 chr2L_16670001 RAL-832 319 chr2L 16697053 16697086 chr2L 16697263 16697299 16 208 4.0 0.5 2.2 5.0 246 chr2L 16697053 intron grp + chr2L 16697176 intron grp + chr2L 16697299 intron grp + chr2L_16_16695001 chr2L_16695001 RAL-832 320 chr2L 16867006 16867043 chr2L 16867121 16867158 9 114 0.5 3.5 2.0 3.0 152 chr2L 16867006 intergenic not near genes chr2L 16867082 intergenic not near genes chr2L 16867158 intergenic not near genes chr2L_9_16865001 chr2L_16865001 RAL-832 321 chr2L 16952675 16952712 chr2L 16952804 16952841 6 124 1.5 3.0 2.2 1.9 166 chr2L 16952675 intergenic not near genes chr2L 16952758 intergenic not near genes chr2L 16952841 intergenic not near genes chr2L_6_16950001 chr2L_16950001 RAL-832 322 chr2L 16958089 16958135 chr2L 16962897 16962923 Doc 14 4800 2.5 3.5 3.0 3.5 4834 chr2L 16958089 intergenic not near genes chr2L 16960506 intergenic not near genes chr2L 16962923 intergenic not near genes chr2L_14_16960001 chr2L_16960001 RAL-832 323 chr2L 17033921 17033951 chr2L 17034006 17034041 8 89 2.0 3.5 2.8 2.1 120 chr2L 17033921 intergenic not near genes chr2L 17033981 intergenic not near genes chr2L 17034041 intergenic not near genes chr2L_8_17030001 chr2L_17030001 RAL-832 324 chr2L 17052389 17052444 chr2L 17052521 17052551 15 129 3.5 0.5 2.0 5.0 162 chr2L 17052389 intergenic not near genes chr2L 17052470 intergenic not near genes chr2L 17052551 intergenic not near genes chr2L_15_17050001 chr2L_17050001 RAL-832 325 chr2L 17062735 17062784 chr2L 17062837 17062881 6 101 2.5 0.5 1.5 2.4 146 chr2L 17062735 intergenic not near genes chr2L 17062808 intergenic not near genes chr2L 17062881 intergenic not near genes chr2L_6_17060001 chr2L_17060001 RAL-832 326 chr2L 17167551 17167580 chr2L 17167806 17167841 pogo 8 257 4.5 2.0 3.2 1.9 290 chr2L 17167551 intron,intron CG34106 +,beat-IIIa + chr2L 17167696 intron,intron CG34106 +,beat-IIIa + chr2L 17167841 intron,intron CG34106 +,beat-IIIa + chr2L_8_17165001 chr2L_17165001 RAL-832 327 chr2L 17199142 17199190 chr2L 17200629 17200667 hobo 8 1482 5.0 4.5 4.8 1.4 1525 chr2L 17199142 intron beat-IIIc - chr2L 17199904 intron beat-IIIc - chr2L 17200667 intron beat-IIIc - chr2L_8_17195001 chr2L_17195001 RAL-832 328 chr2L 17238851 17238857 chr2L 17239023 17239034 4 178 10.0 0.0 5.0 0.7 183 chr2L 17238851 intron beat-IIIc - chr2L 17238942 intron beat-IIIc - chr2L 17239034 intron beat-IIIc - chr2L_4_17235001 chr2L_17235001 RAL-832 329 chr2L 17238859 17239060 chr2L 17239019 17239164 20 120 0.0 0.0 0.0 20.0 305 chr2L 17238859 intron beat-IIIc - chr2L 17239012 intron beat-IIIc - chr2L 17239164 intron beat-IIIc - chr2L_20_17235001 chr2L_17235001 RAL-832 330 chr2L 17273195 17273224 chr2L 17277973 17277975 F-element 9 4778 1.5 4.0 2.8 2.4 4780 chr2L 17273195 intergenic not near genes chr2L 17275585 intergenic not near genes chr2L 17277975 intergenic not near genes chr2L_9_17275001 chr2L_17275001 RAL-832 331 chr2L 17327908 17327928 chr2L 17327996 17328010 5 94 7.0 3.0 5.0 0.8 102 chr2L 17327908 intergenic not near genes chr2L 17327959 intergenic not near genes chr2L 17328010 intergenic not near genes chr2L_5_17325001 chr2L_17325001 RAL-832 332 chr2L 17385998 17386018 chr2L 17386099 17386119 7 99 7.5 7.5 7.5 0.8 121 chr2L 17385998 intron CLIP-190 + chr2L 17386058 intron CLIP-190 + chr2L 17386119 intron CLIP-190 + chr2L_7_17385001 chr2L_17385001 RAL-832 333 chr2L 17386019 17386041 chr2L 17386095 17386142 14 95 4.0 7.0 5.5 2.2 123 chr2L 17386019 intron CLIP-190 + chr2L 17386080 intron CLIP-190 + chr2L 17386142 intron CLIP-190 + chr2L_14_17385001 chr2L_17385001 RAL-832 334 chr2L 17397994 17398030 chr2L 17398089 17398125 12 97 0.5 3.0 1.8 4.3 131 chr2L 17397994 intron CLIP-190 + chr2L 17398060 intron CLIP-190 + chr2L 17398125 intron CLIP-190 + chr2L_12_17395001 chr2L_17395001 RAL-832 335 chr2L 17399335 17399358 chr2L 17399419 17399465 9 103 2.5 0.0 1.2 4.1 130 chr2L 17399335 intron CLIP-190 + chr2L 17399400 intron CLIP-190 + chr2L 17399465 intron CLIP-190 + chr2L_9_17395001 chr2L_17395001 RAL-832 336 chr2L 17420873 17420898 chr2L 17420974 17420999 5 99 3.5 3.0 3.2 1.2 126 chr2L 17420873 intron Dif - chr2L 17420936 intron Dif - chr2L 17420999 intron Dif - chr2L_5_17420001 chr2L_17420001 RAL-832 337 chr2L 17432615 17432660 chr2L 17432712 17432736 8 86 5.5 5.0 5.2 1.3 121 chr2L 17432615 intron Dif - chr2L 17432676 intron Dif - chr2L 17432736 intron Dif - chr2L_8_17430001 chr2L_17430001 RAL-832 338 chr2L 17456375 17456427 chr2L 17456487 17456523 16 97 1.0 0.5 0.8 8.9 148 chr2L 17456375 intron CG5050 + chr2L 17456449 intron CG5050 + chr2L 17456523 intron CG5050 + chr2L_16_17455001 chr2L_17455001 RAL-832 339 chr2L 17543598 17543620 chr2L 17543683 17543733 9 98 1.5 1.5 1.5 3.6 135 chr2L 17543598 intergenic not near genes chr2L 17543666 intergenic not near genes chr2L 17543733 intergenic not near genes chr2L_9_17540001 chr2L_17540001 RAL-832 340 chr2L 17551305 17551324 chr2L 17551436 17551454 9 130 6.5 1.0 3.8 1.9 149 chr2L 17551305 intergenic not near genes chr2L 17551380 intergenic not near genes chr2L 17551454 intergenic not near genes chr2L_9_17550001 chr2L_17550001 RAL-832 341 chr2L 17564140 17564179 chr2L 17564243 17564282 12 102 3.5 4.5 4.0 2.4 142 chr2L 17564140 intergenic not near genes chr2L 17564211 intergenic not near genes chr2L 17564282 intergenic not near genes chr2L_12_17560001 chr2L_17560001 RAL-832 342 chr2L 17580905 17580920 chr2L 17581754 17581794 6 856 3.5 2.5 3.0 1.5 889 chr2L 17580905 intergenic not near genes chr2L 17581350 intergenic not near genes chr2L 17581794 intergenic not near genes chr2L_6_17580001 chr2L_17580001 RAL-832 343 chr2L 17680977 17681026 chr2L 17681073 17681087 7 78 1.0 1.0 1.0 3.5 110 chr2L 17680977 intron CadN - chr2L 17681032 intron CadN - chr2L 17681087 intron CadN - chr2L_7_17680001 chr2L_17680001 RAL-832 344 chr2L 17687503 17687520 chr2L 17692268 17692285 F-element 5 4764 2.5 1.5 2.0 1.7 4782 chr2L 17687503 intron CadN - chr2L 17689894 intron CadN - chr2L 17692285 intron CadN - chr2L_5_17685001 chr2L_17685001 RAL-832 345 chr2L 17723770 17723792 chr2L 17723883 17723905 4 110 4.5 6.0 5.2 0.6 135 chr2L 17723770 intron CadN - chr2L 17723838 intron CadN - chr2L 17723905 intron CadN - chr2L_4_17720001 chr2L_17720001 RAL-832 346 chr2L 17741141 17741178 chr2L 17741230 17741277 7 94 4.5 0.5 2.5 2.0 136 chr2L 17741141 intron CadN - chr2L 17741209 intron CadN - chr2L 17741277 intron CadN - chr2L_7_17740001 chr2L_17740001 RAL-832 347 chr2L 17819906 17819940 chr2L 17825128 17825149 copia 6 5218 4.0 2.5 3.2 1.4 5243 chr2L 17819906 intron CadN2 - chr2L 17822528 intron CadN2 - chr2L 17825149 intron CadN2 - chr2L_6_17820001 chr2L_17820001 RAL-832 348 chr2L 17879980 17880021 chr2L 17880087 17880128 4 104 0.5 2.5 1.5 1.6 148 chr2L 17879980 intergenic not near genes chr2L 17880054 intergenic not near genes chr2L 17880128 intergenic not near genes chr2L_4_17880001 chr2L_17880001 RAL-832 349 chr2L 17911969 17911989 chr2L 17914139 17914174 pogo 7 2189 2.0 5.0 3.5 1.6 2205 chr2L 17911969 intergenic not near genes chr2L 17913072 intergenic not near genes chr2L 17914174 intergenic CG43271 - chr2L_7_17910001 chr2L_17910001 RAL-832 350 chr2L 17951937 17951964 chr2L 17953412 17953428 hobo 6 1478 3.5 4.0 3.8 1.2 1491 chr2L 17951937 intergenic CR44398 -,CR44397 - chr2L 17952682 intergenic not near genes chr2L 17953428 intergenic not near genes chr2L_6_17950001 chr2L_17950001 RAL-832 351 chr2L 17951965 17951975 chr2L 17953410 17953462 hobo 4 1472 3.0 3.5 3.2 1.0 1497 chr2L 17951965 intergenic CR44398 -,CR44397 - chr2L 17952714 intergenic not near genes chr2L 17953462 intergenic not near genes chr2L_4_17950001 chr2L_17950001 RAL-832 352 chr2L 18051867 18051908 chr2L 18061020 18061044 roo 8 9144 4.5 3.0 3.8 1.7 9177 chr2L 18051867 intron rdo + chr2L 18056456 intron rdo + chr2L 18061044 intron rdo + chr2L_8_18055001 chr2L_18055001 RAL-832 353 chr2L 18079796 18079840 chr2L 18079902 18079935 6 100 4.5 4.0 4.2 1.2 139 chr2L 18079796 intron Arr1 + chr2L 18079866 intron Arr1 + chr2L 18079935 intron Arr1 + chr2L_6_18075001 chr2L_18075001 RAL-832 354 chr2L 18235056 18235092 chr2L 18235197 18235241 4 134 1.0 2.0 1.5 1.6 185 chr2L 18235056 intron CG42750 - chr2L 18235148 intron CG42750 - chr2L 18235241 intron CG42750 - chr2L_4_18235001 chr2L_18235001 RAL-832 355 chr2L 18254792 18254841 chr2L 18254912 18254952 13 112 4.5 5.0 4.8 2.2 160 chr2L 18254792 intron CG42750 - chr2L 18254872 intron CG42750 - chr2L 18254952 intron CG42750 - chr2L_13_18250001 chr2L_18250001 RAL-832 356 chr2L 18264133 18264168 chr2L 18264226 18264256 7 97 2.5 0.0 1.2 3.2 123 chr2L 18264133 intron CG42750 - chr2L 18264194 intron CG42750 - chr2L 18264256 intron CG42750 - chr2L_7_18260001 chr2L_18260001 RAL-832 357 chr2L 18337618 18337626 chr2L 18337704 18337722 5 89 6.5 2.5 4.5 0.9 104 chr2L 18337618 intron Fas3 + chr2L 18337670 intron Fas3 + chr2L 18337722 intron Fas3 + chr2L_5_18335001 chr2L_18335001 RAL-832 358 chr2L 18337628 18337659 chr2L 18337703 18337752 4 90 1.0 2.5 1.8 1.4 124 chr2L 18337628 intron Fas3 + chr2L 18337690 intron Fas3 + chr2L 18337752 intron Fas3 + chr2L_4_18335001 chr2L_18335001 RAL-832 359 chr2L 18394757 18394797 chr2L 18394962 18394986 8 201 5.5 4.0 4.8 1.4 229 chr2L 18394757 intergenic not near genes chr2L 18394872 intergenic not near genes chr2L 18394986 intergenic not near genes chr2L_8_18390001 chr2L_18390001 RAL-832 360 chr2L 18408012 18408031 chr2L 18412816 18412818 Doc 5 4799 8.0 0.0 4.0 1.0 4806 chr2L 18408012 intergenic not near genes chr2L 18410415 intergenic not near genes chr2L 18412818 intergenic not near genes chr2L_5_18410001 chr2L_18410001 RAL-832 361 chr2L 18423845 18423871 chr2L 18423947 18423982 11 106 1.5 4.0 2.8 2.9 137 chr2L 18423845 intergenic not near genes chr2L 18423914 intergenic not near genes chr2L 18423982 intergenic not near genes chr2L_11_18420001 chr2L_18420001 RAL-832 362 chr2L 18790290 18790312 chr2L 18791091 18791136 8 818 8.0 28.0 18.0 0.4 846 chr2L 18790290 intron ham - chr2L 18790713 intron ham - chr2L 18791136 intron ham - chr2L_8_18790001 chr2L_18790001 RAL-832 363 chr2L 18811413 18811431 chr2L 18811515 18811533 6 102 6.5 1.0 3.8 1.2 120 chr2L 18811413 intergenic CG10570 -,CG42502 - chr2L 18811473 intergenic CG10570 -,CG42502 - chr2L 18811533 intergenic not near genes chr2L_6_18810001 chr2L_18810001 RAL-832 364 chr2L 18812527 18812553 chr2L 18812845 18812886 5 327 0.0 5.5 2.8 1.3 359 chr2L 18812527 intergenic CG17325 +,CG42305 + chr2L 18812706 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812886 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_5_18810001 chr2L_18810001 RAL-832 365 chr2L 18872928 18872968 chr2L 18873033 18873059 4 100 1.5 1.0 1.2 1.8 131 chr2L 18872928 intron tup - chr2L 18872994 intron tup - chr2L 18873059 intron tup - chr2L_4_18870001 chr2L_18870001 RAL-832 366 chr2L 18883871 18883883 chr2L 18883939 18883954 4 80 2.5 0.5 1.5 1.6 83 chr2L 18883871 intergenic not near genes chr2L 18883912 intergenic not near genes chr2L 18883954 intergenic not near genes chr2L_4_18880001 chr2L_18880001 RAL-832 367 chr2L 18898398 18898426 chr2L 18898481 18898508 10 89 1.5 1.0 1.2 4.5 110 chr2L 18898398 intergenic not near genes chr2L 18898453 intergenic not near genes chr2L 18898508 intergenic not near genes chr2L_10_18895001 chr2L_18895001 RAL-832 368 chr2L 18902610 18902652 chr2L 18902911 18902928 9 293 3.5 3.5 3.5 2.0 318 chr2L 18902610 intergenic not near genes chr2L 18902769 intergenic not near genes chr2L 18902928 intergenic not near genes chr2L_9_18900001 chr2L_18900001 RAL-832 369 chr2L 19141176 19141205 chr2L 19141300 19141319 4 120 6.0 1.5 3.8 0.8 143 chr2L 19141176 intron brat + chr2L 19141248 intron brat + chr2L 19141319 intron brat + chr2L_4_19140001 chr2L_19140001 RAL-832 370 chr2L 19147379 19147402 chr2L 19154408 19154457 297 7 7049 1.5 3.5 2.5 2.0 7078 chr2L 19147379 intron brat + chr2L 19150918 intron brat + chr2L 19154457 intron brat + chr2L_7_19150001 chr2L_19150001 RAL-832 371 chr2L 19237302 19237331 chr2L 19237404 19237430 4 98 2.5 2.0 2.2 1.2 128 chr2L 19237302 intergenic not near genes chr2L 19237366 intergenic not near genes chr2L 19237430 intergenic not near genes chr2L_4_19235001 chr2L_19235001 RAL-832 372 chr2L 19345012 19345038 chr2L 19357221 19357241 blood 6 12220 2.5 1.0 1.8 2.1 12229 chr2L 19345012 intron dnt - chr2L 19351126 intron dnt - chr2L 19357241 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-832 373 chr2L 19357528 19357564 chr2L 19357638 19357663 7 101 3.5 3.0 3.2 1.7 135 chr2L 19357528 intron dnt - chr2L 19357596 intron dnt - chr2L 19357663 intron dnt - chr2L_7_19355001 chr2L_19355001 RAL-832 374 chr2L 19405602 19405634 chr2L 19405712 19405714 11 106 3.0 2.0 2.5 3.1 112 chr2L 19405602 intron Pax - chr2L 19405658 intron Pax - chr2L 19405714 intron Pax - chr2L_11_19405001 chr2L_19405001 RAL-832 375 chr2L 19487220 19487236 chr2L 19487292 19487298 6 78 4.0 5.0 4.5 1.1 78 chr2L 19487220 intergenic CG13083 + chr2L 19487259 intergenic CG13083 + chr2L 19487298 intergenic CG13083 + chr2L_6_19485001 chr2L_19485001 RAL-832 376 chr2L 19520173 19520190 chr2L 19520272 19520289 6 97 2.5 6.0 4.2 1.2 116 chr2L 19520173 intron CG10132 + chr2L 19520231 intron CG10132 + chr2L 19520289 intron CG10132 + chr2L_6_19520001 chr2L_19520001 RAL-832 377 chr2L 19543110 19543158 chr2L 19543213 19543227 12 94 6.0 4.5 5.2 1.9 117 chr2L 19543110 intron ref(2)P + chr2L 19543168 intron ref(2)P + chr2L 19543227 intron ref(2)P + chr2L_12_19540001 chr2L_19540001 RAL-832 378 chr2L 19560004 19560037 chr2L 19560262 19560309 4 267 2.0 1.5 1.8 1.4 305 chr2L 19560004 exon Tep5 + chr2L 19560156 exon Tep5 + chr2L 19560309 intron Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-832 379 chr2L 19560823 19560858 chr2L 19560923 19560948 6 97 5.5 0.0 2.8 1.6 125 chr2L 19560823 exon Tep5 + chr2L 19560886 exon Tep5 + chr2L 19560948 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-832 380 chr2L 19561333 19561359 chr2L 19561494 19561512 4 152 1.5 6.0 3.8 0.8 179 chr2L 19561333 exon Tep5 + chr2L 19561422 exon Tep5 + chr2L 19561512 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-832 381 chr2L 19638546 19638570 chr2L 19638630 19638678 13 103 4.0 2.5 3.2 3.1 132 chr2L 19638546 intron Lar + chr2L 19638612 intron Lar + chr2L 19638678 intron Lar + chr2L_13_19635001 chr2L_19635001 RAL-832 382 chr2L 19652556 19652588 chr2L 19674011 19674043 opus 12 21453 8.0 5.0 6.5 1.6 21487 chr2L 19652556 intron Lar + chr2L 19663300 intron Lar + chr2L 19674043 intron Lar + chr2L_12_19660001 chr2L_19660001 RAL-832 383 chr2L 19703540 19703568 chr2L 19712671 19712697 roo 5 9146 5.0 3.5 4.2 1.0 9157 chr2L 19703540 intron Lar + chr2L 19708118 intron Lar + chr2L 19712697 intron Lar + chr2L_5_19705001 chr2L_19705001 RAL-832 384 chr2L 19762820 19762834 chr2L 19763082 19763096 pogo 5 262 1.5 6.0 3.8 1.0 276 chr2L 19762820 intron fbp - chr2L 19762958 intron fbp - chr2L 19763096 intron fbp - chr2L_5_19760001 chr2L_19760001 RAL-832 385 chr2L 19773152 19773184 chr2L 19773254 19773291 12 104 4.0 4.0 4.0 2.4 139 chr2L 19773152 intergenic not near genes chr2L 19773222 intergenic not near genes chr2L 19773291 intergenic not near genes chr2L_12_19770001 chr2L_19770001 RAL-832 386 chr2L 19824403 19824434 chr2L 19824506 19824537 5 98 0.5 3.5 2.0 1.7 134 chr2L 19824403 intron sick + chr2L 19824470 intron sick + chr2L 19824537 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-832 387 chr2L 19837265 19837297 chr2L 19837356 19837392 4 96 4.5 3.5 4.0 0.8 127 chr2L 19837265 intron sick + chr2L 19837328 intron sick + chr2L 19837392 intron sick + chr2L_4_19835001 chr2L_19835001 RAL-832 388 chr2L 19846235 19846277 chr2L 19846333 19846377 10 97 0.5 2.5 1.5 4.0 142 chr2L 19846235 intron sick + chr2L 19846306 intron sick + chr2L 19846377 intron sick + chr2L_10_19845001 chr2L_19845001 RAL-832 389 chr2L 19878973 19879001 chr2L 19879202 19879225 12 226 9.0 1.5 5.2 1.9 252 chr2L 19878973 intron sick + chr2L 19879099 intron sick + chr2L 19879225 intron sick + chr2L_12_19875001 chr2L_19875001 RAL-832 390 chr2L 19911295 19911320 chr2L 19911402 19911410 7 97 1.5 6.5 4.0 1.4 115 chr2L 19911295 intron,3` UTR sick +,CR43097 - chr2L 19911352 intron,3` UTR sick +,CR43097 - chr2L 19911410 intron,3` UTR sick +,CR43097 - chr2L_7_19910001 chr2L_19910001 RAL-832 391 chr2L 19913048 19913077 chr2L 19913514 19913543 4 460 4.5 1.5 3.0 1.0 495 chr2L 19913048 intron,3` UTR sick +,Victoria - chr2L 19913296 intron,exon sick +,Victoria - chr2L 19913543 intron sick + chr2L_4_19910001 chr2L_19910001 RAL-832 392 chr2L 19986904 19986930 chr2L 19987149 19987155 4 229 24.0 12.0 18.0 0.2 251 chr2L 19986904 intron CG43861 - chr2L 19987030 intron CG43861 - chr2L 19987155 intron CG43861 - chr2L_4_19985001 chr2L_19985001 RAL-832 393 chr2L 20005866 20005898 chr2L 20010950 20010973 flea 9 5085 7.0 5.5 6.2 1.2 5107 chr2L 20005866 intron CG43861 - chr2L 20008420 intron CG43861 - chr2L 20010973 intron CG43861 - chr2L_9_20005001 chr2L_20005001 RAL-832 394 chr2L 20079501 20079510 chr2L 20079637 20079651 4 140 9.5 0.0 4.8 0.7 150 chr2L 20079501 intron,intron neb +,fok - chr2L 20079576 intron,intron neb +,fok - chr2L 20079651 intron,intron neb +,fok - chr2L_4_20075001 chr2L_20075001 RAL-832 395 chr2L 20079511 20079546 chr2L 20079636 20079687 8 129 4.0 0.0 2.0 2.7 176 chr2L 20079511 intron,intron neb +,fok - chr2L 20079599 intron,intron neb +,fok - chr2L 20079687 intron,intron neb +,fok - chr2L_8_20075001 chr2L_20075001 RAL-832 396 chr2L 20271245 20271261 chr2L 20271346 20271353 5 92 2.0 4.0 3.0 1.2 108 chr2L 20271245 intergenic not near genes chr2L 20271299 intergenic not near genes chr2L 20271353 intergenic not near genes chr2L_5_20270001 chr2L_20270001 RAL-832 397 chr2L 20272096 20272143 chr2L 20282827 20282864 copia 9 10726 4.0 4.0 4.0 1.8 10768 chr2L 20272096 intergenic not near genes chr2L 20277480 intergenic not near genes chr2L 20282864 intergenic not near genes chr2L_9_20275001 chr2L_20275001 RAL-832 398 chr2L 20296513 20296541 chr2L 20296611 20296642 5 97 0.5 4.5 2.5 1.4 129 chr2L 20296513 intergenic CR43414 - chr2L 20296578 intergenic CR43414 - chr2L 20296642 3` UTR CR43414 - chr2L_5_20295001 chr2L_20295001 RAL-832 399 chr2L 20302977 20303021 chr2L 20303086 20303089 7 99 6.0 0.0 3.0 1.8 112 chr2L 20302977 intergenic not near genes chr2L 20303033 intergenic not near genes chr2L 20303089 intergenic not near genes chr2L_7_20300001 chr2L_20300001 RAL-832 400 chr2L 20310880 20310916 chr2L 20310972 20311005 4 95 0.5 5.5 3.0 1.0 125 chr2L 20310880 intergenic spir + chr2L 20310942 intergenic spir + chr2L 20311005 intergenic spir + chr2L_4_20310001 chr2L_20310001 RAL-832 401 chr2L 20312516 20312565 chr2L 20312621 20312670 4 104 1.5 0.0 0.8 2.2 154 chr2L 20312516 intron spir + chr2L 20312593 intron spir + chr2L 20312670 intron spir + chr2L_4_20310001 chr2L_20310001 RAL-832 402 chr2L 20372207 20372246 chr2L 20372468 20372507 pogo 14 260 0.5 2.5 1.5 5.6 300 chr2L 20372207 intergenic Ugt37a1 - chr2L 20372357 intergenic Ugt37a1 - chr2L 20372507 exon Ugt37a1 - chr2L_14_20370001 chr2L_20370001 RAL-832 403 chr2L 20492734 20492776 chr2L 20493104 20493146 9 366 4.5 8.0 6.2 1.2 412 chr2L 20492734 intergenic not near genes chr2L 20492940 intergenic not near genes chr2L 20493146 intergenic not near genes chr2L_9_20490001 chr2L_20490001 RAL-832 404 chr2L 20498695 20498708 chr2L 20498798 20498827 7 113 1.0 5.5 3.2 1.7 132 chr2L 20498695 intergenic not near genes chr2L 20498761 intergenic not near genes chr2L 20498827 intergenic not near genes chr2L_7_20495001 chr2L_20495001 RAL-832 405 chr2L 20524173 20524185 chr2L 20524270 20524275 4 94 12.0 0.5 6.2 0.6 102 chr2L 20524173 intergenic not near genes chr2L 20524224 intergenic not near genes chr2L 20524275 intergenic not near genes chr2L_4_20520001 chr2L_20520001 RAL-832 406 chr2L 20549113 20549156 chr2L 20549215 20549247 10 97 1.0 3.0 2.0 3.3 134 chr2L 20549113 intergenic not near genes chr2L 20549180 intergenic not near genes chr2L 20549247 intergenic not near genes chr2L_10_20545001 chr2L_20545001 RAL-832 407 chr2L 20553167 20553218 chr2L 20553263 20553314 11 89 1.5 4.0 2.8 2.9 147 chr2L 20553167 intergenic not near genes chr2L 20553240 intergenic not near genes chr2L 20553314 intergenic not near genes chr2L_11_20550001 chr2L_20550001 RAL-832 408 chr2L 20576211 20576239 chr2L 20583685 20583715 blood 5 7470 3.0 2.5 2.8 1.3 7504 chr2L 20576211 intergenic CR45347 + chr2L 20579963 intergenic not near genes chr2L 20583715 3` UTR CR44909 - chr2L_5_20575001 chr2L_20575001 RAL-832 409 chr2L 20601765 20601814 chr2L 20601863 20601912 11 97 2.5 1.5 2.0 3.7 147 chr2L 20601765 intron CR44909 - chr2L 20601838 intron CR44909 - chr2L 20601912 intron CR44909 - chr2L_11_20600001 chr2L_20600001 RAL-832 410 chr2L 20602713 20602749 chr2L 20602821 20602857 9 108 0.0 1.0 0.5 6.0 144 chr2L 20602713 intron CR44909 - chr2L 20602785 intron CR44909 - chr2L 20602857 intron CR44909 - chr2L_9_20600001 chr2L_20600001 RAL-832 411 chr2L 20668668 20668719 chr2L 20668764 20668788 16 90 8.0 4.5 6.2 2.2 120 chr2L 20668668 intron CG31678 - chr2L 20668728 intron CG31678 - chr2L 20668788 intron CG31678 - chr2L_16_20665001 chr2L_20665001 RAL-832 412 chr2L 20674813 20674861 chr2L 20674918 20674959 7 101 1.0 0.0 0.5 4.7 146 chr2L 20674813 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674959 intron CG31678 - chr2L_7_20670001 chr2L_20670001 RAL-832 413 chr2L 20793057 20793068 chr2L 20793206 20793207 4 151 0.0 1.5 0.8 2.2 150 chr2L 20793057 intron vari - chr2L 20793132 intron vari - chr2L 20793207 intron vari - chr2L_4_20790001 chr2L_20790001 RAL-832 414 chr2L 20835800 20835832 chr2L 20836537 20836569 Quasimodo 9 733 3.0 5.0 4.0 1.8 769 chr2L 20835800 5` UTR Oseg5 - chr2L 20836184 intergenic Oseg5 -,Spn38F - chr2L 20836569 intergenic Spn38F - chr2L_9_20835001 chr2L_20835001 RAL-832 415 chr2L 20967918 20967955 chr2L 20968027 20968052 15 105 3.0 2.0 2.5 4.3 134 chr2L 20967918 intron CG42238 - chr2L 20967985 intron CG42238 - chr2L 20968052 intron CG42238 - chr2L_15_20965001 chr2L_20965001 RAL-832 416 chr2L 20976628 20976680 chr2L 20981458 20981497 X-element 10 4825 3.0 2.5 2.8 2.6 4869 chr2L 20976628 intron CG42238 - chr2L 20979062 intron CG42238 - chr2L 20981497 intron CG42238 - chr2L_10_20975001 chr2L_20975001 RAL-832 417 chr2L 21041131 21041165 chr2L 21049401 21049417 Tirant 4 8256 2.0 2.5 2.2 1.2 8286 chr2L 21041131 intron CG42238 - chr2L 21045274 intron CG42238 - chr2L 21049417 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-832 418 chr2L 21113682 21113715 chr2L 21113779 21113828 12 104 3.0 5.5 4.2 2.3 146 chr2L 21113682 intron Nhe2 + chr2L 21113755 intron Nhe2 + chr2L 21113828 intron Nhe2 + chr2L_12_21110001 chr2L_21110001 RAL-832 419 chr2L 21169824 21169874 chr2L 21169926 21169975 25 97 6.5 5.0 5.8 3.7 151 chr2L 21169824 intron Acon + chr2L 21169900 intron Acon + chr2L 21169975 intron Acon + chr2L_25_21165001 chr2L_21165001 RAL-832 420 chr2L 21286595 21286627 chr2L 21286683 21286709 15 93 2.5 5.5 4.0 3.0 114 chr2L 21286595 exon Mio - chr2L 21286652 intron Mio - chr2L 21286709 intron Mio - chr2L_15_21285001 chr2L_21285001 RAL-832 421 chr2L 21307449 21307495 chr2L 21307551 21307591 14 94 2.5 2.0 2.2 4.4 142 chr2L 21307449 intron Mio - chr2L 21307520 intron Mio - chr2L 21307591 intron Mio - chr2L_14_21305001 chr2L_21305001 RAL-832 422 chr2L 21347551 21347567 chr2L 21355042 21355058 blood 5 7491 10.0 8.5 9.2 0.5 7507 chr2L 21347551 intron Tsp39D + chr2L 21351304 intron Tsp39D + chr2L 21355058 intron Tsp39D + chr2L_5_21350001 chr2L_21350001 RAL-832 423 chr2L 21347573 21347583 chr2L 21355027 21355074 blood 5 7479 4.5 4.5 4.5 0.9 7501 chr2L 21347573 intron Tsp39D + chr2L 21351324 intron Tsp39D + chr2L 21355074 intron Tsp39D + chr2L_5_21350001 chr2L_21350001 RAL-832 424 chr2L 21597034 21597057 chr2L 21604772 21604775 roo 9 7744 2.0 4.5 3.2 2.1 7741 chr2L 21597034 intergenic not near genes chr2L 21600904 intergenic not near genes chr2L 21604775 intergenic not near genes chr2L_9_21600001 chr2L_21600001 RAL-832 425 chr2L 21691818 21691850 chr2L 21698298 21698325 Burdock 11 6482 8.0 0.5 4.2 2.1 6507 chr2L 21691818 intron CG31619 + chr2L 21695072 intron CG31619 + chr2L 21698325 intron CG31619 + chr2L_11_21695001 chr2L_21695001 RAL-832 426 chr2L 21754646 21754684 chr2L 21754747 21754785 12 97 4.5 7.0 5.8 1.8 139 chr2L 21754646 intron step - chr2L 21754716 intron step - chr2L 21754785 intron step - chr2L_12_21750001 chr2L_21750001 RAL-832 427 chr2L 21755493 21755514 chr2L 21755621 21755654 5 132 5.5 5.5 5.5 0.8 161 chr2L 21755493 intron step - chr2L 21755574 intron step - chr2L 21755654 intron step - chr2L_5_21755001 chr2L_21755001 RAL-832 428 chr2L 21757554 21757599 chr2L 21757655 21757700 12 100 0.5 5.5 3.0 3.0 146 chr2L 21757554 intergenic step -,CG1416 + chr2L 21757627 intergenic step -,CG1416 + chr2L 21757700 intergenic step -,CG1416 + chr2L_12_21755001 chr2L_21755001 RAL-832 429 chr2L 21855458 21855502 chr2L 21855564 21855609 7 103 4.0 2.0 3.0 1.8 151 chr2L 21855458 intron CR44917 + chr2L 21855534 intron CR44917 + chr2L 21855609 intron CR44917 + chr2L_7_21855001 chr2L_21855001 RAL-832 430 chr2L 21859326 21859346 chr2L 21859409 21859446 8 97 5.5 1.0 3.2 1.9 120 chr2L 21859326 intron CR44917 + chr2L 21859386 intron CR44917 + chr2L 21859446 intron CR44917 + chr2L_8_21855001 chr2L_21855001 RAL-832 431 chr2L 21981685 21981712 chr2L 21990845 21990897 roo 8 9176 0.5 2.0 1.2 3.6 9212 chr2L 21981685 exon CG2528 - chr2L 21986291 intron CG2528 - chr2L 21990897 exon CG2528 - chr2L_8_21985001 chr2L_21985001 RAL-832 432 chr2L 22047233 22047256 chr2L 22047378 22047394 5 139 1.5 4.0 2.8 1.3 161 chr2L 22047233 intergenic not near genes chr2L 22047314 intergenic not near genes chr2L 22047394 intergenic not near genes chr2L_5_22045001 chr2L_22045001 RAL-832 433 chr2L 22164958 22164989 chr2L 22165097 22165138 7 148 4.0 4.5 4.2 1.3 180 chr2L 22164958 3` UTR CG42748 + chr2L 22165048 3` UTR CG42748 + chr2L 22165138 3` UTR CG42748 + chr2L_7_22165001 chr2L_22165001 RAL-832 434 chr2L 22165503 22165516 chr2L 22165608 22165621 5 103 10.5 4.0 7.2 0.6 118 chr2L 22165503 3` UTR CG42748 + chr2L 22165562 3` UTR CG42748 + chr2L 22165621 3` UTR CG42748 + chr2L_5_22165001 chr2L_22165001 RAL-832 435 chr2L 22165522 22165548 chr2L 22165601 22165652 8 101 5.0 2.0 3.5 1.8 130 chr2L 22165522 3` UTR CG42748 + chr2L 22165587 3` UTR CG42748 + chr2L 22165652 3` UTR CG42748 + chr2L_8_22165001 chr2L_22165001 RAL-832 436 chr2L 22548930 22548942 chr2L 22550145 22550181 1360 7 1234 0.5 8.0 4.2 1.3 1251 chr2L 22548930 intergenic CG17490 + chr2L 22549556 intergenic not near genes chr2L 22550181 intergenic CG17493 + chr2L_7_22545001 chr2L_22545001 RAL-832 437 chr2L 22558143 22558165 chr2L 22558217 22558260 4 90 1.5 4.5 3.0 1.0 117 chr2L 22558143 intergenic not near genes chr2L 22558202 intergenic not near genes chr2L 22558260 intergenic not near genes chr2L_4_22555001 chr2L_22555001 RAL-832 438 chr2L 22558168 22558171 chr2L 22558214 22558258 6 73 2.5 3.5 3.0 1.5 90 chr2L 22558168 intergenic not near genes chr2L 22558213 intergenic not near genes chr2L 22558258 intergenic not near genes chr2L_6_22555001 chr2L_22555001 RAL-832 439 chr2L 22558368 22558422 chr2L 22558699 22558743 13 320 3.0 5.0 4.0 2.6 375 chr2L 22558368 intergenic not near genes chr2L 22558556 intergenic not near genes chr2L 22558743 intergenic not near genes chr2L_13_22555001 chr2L_22555001 RAL-832 440 chr2L 22581964 22582000 chr2L 22583773 22583799 S-element 7 1806 3.5 6.5 5.0 1.2 1835 chr2L 22581964 intron CG17494 + chr2L 22582882 intron CG17494 + chr2L 22583799 intron CG17494 + chr2L_7_22580001 chr2L_22580001 RAL-832 441 chr2L 22719426 22719456 chr2L 22727568 22727594 gypsy2 6 8136 2.5 2.0 2.2 1.9 8168 chr2L 22719426 intron CG40006 - chr2L 22723510 intron CG40006 - chr2L 22727594 intron CG40006 - chr2L_6_22720001 chr2L_22720001 RAL-832 442 chr2L 22776410 22776449 chr2L 22778211 22778258 S-element 14 1807 5.5 6.0 5.8 2.1 1848 chr2L 22776410 intergenic not near genes chr2L 22777334 intergenic not near genes chr2L 22778258 intergenic not near genes chr2L_14_22775001 chr2L_22775001 RAL-832 443 chr2L 22941227 22941254 chr2L 22941329 22941343 11 99 3.0 2.5 2.8 2.9 116 chr2L 22941227 3` UTR lt + chr2L 22941285 3` UTR lt + chr2L 22941343 3` UTR lt + chr2L_11_22940001 chr2L_22940001 RAL-832 444 chr2L 23020489 23020533 chr2L 23020585 23020629 5 91 3.0 1.5 2.2 1.6 140 chr2L 23020489 intron Cht3 - chr2L 23020559 intron Cht3 - chr2L 23020629 intron Cht3 - chr2L_5_23020001 chr2L_23020001 RAL-832 445 chr2R 1320201 1320201 chr2R 11463556 11463556 invader1 6 10143355 11.5 15.0 13.2 0.4 10143355 chr2R 1320201 intergenic not near genes chr2R 6391878 intergenic not near genes chr2R 11463556 3` UTR E(Pc) + chr2R_6_6390001 chr2R_6390001 RAL-832 446 chr2R 1320204 1320204 chr2R 21358403 21358403 9 20038199 11.5 3.5 7.5 1.1 20038199 chr2R 1320204 intergenic not near genes chr2R 11339304 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_9_11335001 chr2R_11335001 RAL-832 447 chr2R 1516587 1516595 chr2R 1521334 1521339 1731 8 4747 47.5 36.0 41.8 0.2 4752 chr2R 1516587 exon Maf1 - chr2R 1518963 intron Maf1 - chr2R 1521339 5` UTR Maf1 - chr2R_8_1515001 chr2R_1515001 RAL-832 448 chr2R 1516596 1516602 chr2R 1521333 1521345 1731 11 4746 44.5 35.0 39.8 0.3 4749 chr2R 1516596 exon Maf1 - chr2R 1518970 intron Maf1 - chr2R 1521345 5` UTR Maf1 - chr2R_11_1515001 chr2R_1515001 RAL-832 449 chr2R 2498995 2499016 chr2R 2508138 2508183 roo 4 9160 2.5 5.5 4.0 0.8 9188 chr2R 2498995 intron MFS17 - chr2R 2503589 intron MFS17 - chr2R 2508183 intron MFS17 - chr2R_4_2500001 chr2R_2500001 RAL-832 450 chr2R 2846574 2846621 chr2R 2846684 2846709 13 106 4.5 5.0 4.8 2.2 135 chr2R 2846574 intron CG41378 - chr2R 2846642 intron CG41378 - chr2R 2846709 intergenic CG41378 - chr2R_13_2845001 chr2R_2845001 RAL-832 451 chr2R 4604549 4604582 chr2R 4604628 4604672 15 82 2.0 1.0 1.5 6.0 123 chr2R 4604549 intron p120ctn + chr2R 4604610 intron p120ctn + chr2R 4604672 intron p120ctn + chr2R_15_4600001 chr2R_4600001 RAL-832 452 chr2R 4617903 4617951 chr2R 4618195 4618207 5 283 0.5 7.5 4.0 1.0 304 chr2R 4617903 intergenic not near genes chr2R 4618055 intergenic not near genes chr2R 4618207 intergenic not near genes chr2R_5_4615001 chr2R_4615001 RAL-832 453 chr2R 4634162 4634185 chr2R 4634236 4634268 11 79 6.5 4.0 5.2 1.8 106 chr2R 4634162 intergenic not near genes chr2R 4634215 intergenic not near genes chr2R 4634268 intergenic not near genes chr2R_11_4630001 chr2R_4630001 RAL-832 454 chr2R 4750331 4750347 chr2R 4751497 4751503 1360 6 1164 7.0 1.5 4.2 1.2 1172 chr2R 4750331 intron conu + chr2R 4750917 intron conu + chr2R 4751503 intron conu + chr2R_6_4750001 chr2R_4750001 RAL-832 455 chr2R 4750349 4750376 chr2R 4751496 4751553 1360 6 1158 2.0 1.5 1.8 2.1 1204 chr2R 4750349 intron conu + chr2R 4750951 intron conu + chr2R 4751553 intron conu + chr2R_6_4750001 chr2R_4750001 RAL-832 456 chr2R 4820914 4820932 chr2R 4821010 4821028 6 96 3.0 7.5 5.2 1.0 114 chr2R 4820914 intron CG17528 - chr2R 4820971 intron CG17528 - chr2R 4821028 intron CG17528 - chr2R_6_4820001 chr2R_4820001 RAL-832 457 chr2R 4820933 4820945 chr2R 4821009 4821041 4 91 2.5 7.5 5.0 0.7 108 chr2R 4820933 intron CG17528 - chr2R 4820987 intron CG17528 - chr2R 4821041 intron CG17528 - chr2R_4_4820001 chr2R_4820001 RAL-832 458 chr2R 4940939 4940963 chr2R 4943409 4943416 7 2465 23.5 4.5 14.0 0.5 2477 chr2R 4940939 intron Ir41a + chr2R 4942178 intron Ir41a + chr2R 4943416 intron Ir41a + chr2R_7_4940001 chr2R_4940001 RAL-832 459 chr2R 5019261 5019312 chr2R 5019367 5019402 10 101 2.0 3.5 2.8 2.6 141 chr2R 5019261 intron Ir41a + chr2R 5019332 intron Ir41a + chr2R 5019402 intron Ir41a + chr2R_10_5015001 chr2R_5015001 RAL-832 460 chr2R 5123240 5123249 chr2R 5123306 5123333 6 81 5.0 2.5 3.8 1.2 93 chr2R 5123240 intron gus - chr2R 5123286 intron gus - chr2R 5123333 intron gus - chr2R_6_5120001 chr2R_5120001 RAL-832 461 chr2R 5125232 5125256 chr2R 5125565 5125594 6 336 4.0 2.5 3.2 1.4 362 chr2R 5125232 intron gus - chr2R 5125413 intron gus - chr2R 5125594 intron gus - chr2R_6_5125001 chr2R_5125001 RAL-832 462 chr2R 5125266 5125276 chr2R 5125564 5125590 6 314 0.0 2.5 1.2 2.7 324 chr2R 5125266 intron gus - chr2R 5125428 intron gus - chr2R 5125590 intron gus - chr2R_6_5125001 chr2R_5125001 RAL-832 463 chr2R 5209762 5209807 chr2R 5210315 5210348 12 550 3.0 4.5 3.8 2.5 586 chr2R 5209762 intron Nipped-A - chr2R 5210055 intron Nipped-A - chr2R 5210348 intron Nipped-A - chr2R_12_5210001 chr2R_5210001 RAL-832 464 chr2R 5417990 5418027 chr2R 5420626 5420679 Burdock 14 2639 4.0 5.0 4.5 2.5 2689 chr2R 5417990 intron laccase2 + chr2R 5419334 intron laccase2 + chr2R 5420679 intron laccase2 + chr2R_14_5415001 chr2R_5415001 RAL-832 465 chr2R 5472379 5472385 chr2R 5472462 5472462 4 88 3.0 4.0 3.5 0.9 83 chr2R 5472379 intron CG30440 - chr2R 5472420 intron CG30440 - chr2R 5472462 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-832 466 chr2R 5475576 5475627 chr2R 5475687 5475725 14 112 3.0 6.5 4.8 2.4 149 chr2R 5475576 intron CG30440 - chr2R 5475650 intron CG30440 - chr2R 5475725 intron CG30440 - chr2R_14_5475001 chr2R_5475001 RAL-832 467 chr2R 5509518 5509538 chr2R 5509632 5509638 10 112 5.5 3.0 4.2 1.9 120 chr2R 5509518 intron CG30438 + chr2R 5509578 intron CG30438 + chr2R 5509638 intron CG30438 + chr2R_10_5505001 chr2R_5505001 RAL-832 468 chr2R 5543197 5543221 chr2R 5547301 5547325 invader1 6 4104 0.0 7.0 3.5 1.3 4128 chr2R 5543197 intron CG30438 + chr2R 5545261 intron CG30438 + chr2R 5547325 intron CG30438 + chr2R_6_5545001 chr2R_5545001 RAL-832 469 chr2R 5550018 5550064 chr2R 5550154 5550201 8 133 0.5 4.0 2.2 2.5 183 chr2R 5550018 intergenic CG30438 + chr2R 5550110 intergenic not near genes chr2R 5550201 intergenic not near genes chr2R_8_5550001 chr2R_5550001 RAL-832 470 chr2R 5581404 5581425 chr2R 5627598 5627618 9 46200 1.5 3.0 2.2 2.8 46214 chr2R 5581404 intergenic not near genes chr2R 5604511 exon Fis1 - chr2R 5627618 intergenic not near genes chr2R_9_5600001 chr2R_5600001 RAL-832 471 chr2R 5714433 5714460 chr2R 5714618 5714643 7 188 8.0 0.0 4.0 1.4 210 chr2R 5714433 intron ap - chr2R 5714538 intron ap - chr2R 5714643 intron ap - chr2R_7_5710001 chr2R_5710001 RAL-832 472 chr2R 5750434 5750454 chr2R 5750545 5750566 9 111 8.5 5.5 7.0 1.1 132 chr2R 5750434 intergenic not near genes chr2R 5750500 intergenic not near genes chr2R 5750566 intergenic not near genes chr2R_9_5750001 chr2R_5750001 RAL-832 473 chr2R 5772547 5772550 chr2R 5772626 5772642 9 93 3.0 5.0 4.0 1.8 95 chr2R 5772547 3` UTR Gp210 + chr2R 5772594 3` UTR Gp210 + chr2R 5772642 3` UTR Gp210 + chr2R_9_5770001 chr2R_5770001 RAL-832 474 chr2R 5790443 5790495 chr2R 5790548 5790600 18 100 4.5 4.0 4.2 3.5 157 chr2R 5790443 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790600 intergenic not near genes chr2R_18_5790001 chr2R_5790001 RAL-832 475 chr2R 5863331 5863377 chr2R 5867282 5867325 7 3949 28.5 11.5 20.0 0.3 3994 chr2R 5863331 intergenic not near genes chr2R 5865328 intergenic not near genes chr2R 5867325 intergenic not near genes chr2R_7_5865001 chr2R_5865001 RAL-832 476 chr2R 5863209 5863251 chr2R 5867303 5867345 5 4096 23.5 11.0 17.2 0.3 4136 chr2R 5863209 intergenic not near genes chr2R 5865277 intergenic not near genes chr2R 5867345 intergenic not near genes chr2R_5_5865001 chr2R_5865001 RAL-832 477 chr2R 5869256 5869306 chr2R 5874351 5874388 flea 12 5076 2.5 2.0 2.2 3.8 5132 chr2R 5869256 intergenic not near genes chr2R 5871822 intergenic not near genes chr2R 5874388 intergenic not near genes chr2R_12_5870001 chr2R_5870001 RAL-832 478 chr2R 5878922 5878955 chr2R 5879012 5879055 12 90 3.5 7.5 5.5 1.8 133 chr2R 5878922 intergenic CG44438 - chr2R 5878988 intergenic CG44438 - chr2R 5879055 intergenic CG44438 - chr2R_12_5875001 chr2R_5875001 RAL-832 479 chr2R 5885352 5885376 chr2R 5885495 5885523 7 145 1.5 2.5 2.0 2.3 171 chr2R 5885352 5` UTR CR44125 + chr2R 5885438 5` UTR CR44125 + chr2R 5885523 5` UTR CR44125 + chr2R_7_5885001 chr2R_5885001 RAL-832 480 chr2R 5902147 5902170 chr2R 5909715 5909727 17.6 10 7573 2.0 4.0 3.0 2.5 7580 chr2R 5902147 intron CG43366 + chr2R 5905937 intron CG43366 + chr2R 5909727 intron CG43366 + chr2R_10_5905001 chr2R_5905001 RAL-832 481 chr2R 5917753 5917803 chr2R 5917852 5917892 9 91 0.5 2.0 1.2 4.1 139 chr2R 5917753 intron CG43366 + chr2R 5917822 intron CG43366 + chr2R 5917892 intron CG43366 + chr2R_9_5915001 chr2R_5915001 RAL-832 482 chr2R 6016773 6016818 chr2R 6016877 6016921 7 104 4.5 5.5 5.0 1.2 148 chr2R 6016773 intergenic not near genes chr2R 6016847 intergenic not near genes chr2R 6016921 intergenic not near genes chr2R_7_6015001 chr2R_6015001 RAL-832 483 chr2R 6088354 6088365 chr2R 6088463 6088468 4 108 7.5 6.0 6.8 0.5 114 chr2R 6088354 intergenic not near genes chr2R 6088411 intergenic not near genes chr2R 6088468 intergenic not near genes chr2R_4_6085001 chr2R_6085001 RAL-832 484 chr2R 6088373 6088386 chr2R 6088475 6088498 6 111 5.5 10.5 8.0 0.7 125 chr2R 6088373 intergenic not near genes chr2R 6088436 intergenic not near genes chr2R 6088498 intergenic not near genes chr2R_6_6085001 chr2R_6085001 RAL-832 485 chr2R 6129324 6129358 chr2R 6129407 6129422 10 90 1.0 3.0 2.0 3.3 98 chr2R 6129324 intron EcR - chr2R 6129373 intron EcR - chr2R 6129422 intron EcR - chr2R_10_6125001 chr2R_6125001 RAL-832 486 chr2R 6144397 6144439 chr2R 6144501 6144513 15 98 6.5 7.5 7.0 1.9 116 chr2R 6144397 intron EcR - chr2R 6144455 intron EcR - chr2R 6144513 intron EcR - chr2R_15_6140001 chr2R_6140001 RAL-832 487 chr2R 6168194 6168228 chr2R 6168277 6168315 9 93 4.0 0.5 2.2 2.8 121 chr2R 6168194 intron EcR - chr2R 6168254 intron EcR - chr2R 6168315 intron EcR - chr2R_9_6165001 chr2R_6165001 RAL-832 488 chr2R 6178102 6178116 chr2R 6178248 6178262 6 144 8.0 6.0 7.0 0.8 160 chr2R 6178102 intergenic not near genes chr2R 6178182 intergenic not near genes chr2R 6178262 intergenic not near genes chr2R_6_6175001 chr2R_6175001 RAL-832 489 chr2R 6178123 6178143 chr2R 6178247 6178289 6 138 3.5 6.0 4.8 1.0 166 chr2R 6178123 intergenic not near genes chr2R 6178206 intergenic not near genes chr2R 6178289 intergenic not near genes chr2R_6_6175001 chr2R_6175001 RAL-832 490 chr2R 6194673 6194696 chr2R 6194776 6194779 4 98 9.5 2.5 6.0 0.6 106 chr2R 6194673 intron Ptr - chr2R 6194726 intron Ptr - chr2R 6194779 intron Ptr - chr2R_4_6190001 chr2R_6190001 RAL-832 491 chr2R 6492544 6492558 chr2R 6492640 6492654 5 94 0.5 7.5 4.0 1.0 110 chr2R 6492544 intergenic not near genes chr2R 6492599 intergenic not near genes chr2R 6492654 intergenic not near genes chr2R_5_6490001 chr2R_6490001 RAL-832 492 chr2R 6494541 6494553 chr2R 6499295 6499335 F-element 6 4770 0.5 0.0 0.2 5.0 4794 chr2R 6494541 intergenic not near genes chr2R 6496938 intergenic not near genes chr2R 6499335 intergenic not near genes chr2R_6_6495001 chr2R_6495001 RAL-832 493 chr2R 6579777 6579799 chr2R 6584857 6584905 flea 9 5097 6.5 5.0 5.8 1.3 5128 chr2R 6579777 intron jing + chr2R 6582341 intron jing + chr2R 6584905 intron jing + chr2R_9_6580001 chr2R_6580001 RAL-832 494 chr2R 6699573 6699623 chr2R 6699678 6699708 16 103 3.5 6.5 5.0 2.7 135 chr2R 6699573 intergenic Rab2 + chr2R 6699640 intergenic Rab2 + chr2R 6699708 intergenic Rab2 + chr2R_16_6695001 chr2R_6695001 RAL-832 495 chr2R 6706960 6707000 chr2R 6707233 6707261 15 273 3.0 2.5 2.8 3.9 301 chr2R 6706960 intron,intron CG3409 -,CG45092 - chr2R 6707110 intron,intron CG3409 -,CG45092 - chr2R 6707261 intron,intron,3` UTR CG3409 -,CG45092 -,mir-4975 - chr2R_15_6705001 chr2R_6705001 RAL-832 496 chr2R 6952152 6952184 chr2R 6959744 6959784 opus 12 7599 3.0 4.5 3.8 2.5 7632 chr2R 6952152 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959784 intron,intron mim -,CheB42c - chr2R_12_6955001 chr2R_6955001 RAL-832 497 chr2R 6964127 6964310 chr2R 6964235 6964407 25 98 2.0 2.0 2.0 8.3 280 chr2R 6964127 intron,intron mim -,CheB42c - chr2R 6964267 intron,intron mim -,CheB42c - chr2R 6964407 intron,intron mim -,CheB42c - chr2R_25_6960001 chr2R_6960001 RAL-832 498 chr2R 7102641 7102671 chr2R 7102761 7102791 6 115 1.5 6.0 3.8 1.2 150 chr2R 7102641 intron esn + chr2R 7102716 intron esn + chr2R 7102791 intron esn + chr2R_6_7100001 chr2R_7100001 RAL-832 499 chr2R 7153162 7153179 chr2R 7153251 7153255 4 87 2.5 2.0 2.2 1.2 93 chr2R 7153162 intron,intron pk +,Spn43Ab - chr2R 7153208 intron,intron pk +,Spn43Ab - chr2R 7153255 intron,intron pk +,Spn43Ab - chr2R_4_7150001 chr2R_7150001 RAL-832 500 chr2R 7173767 7173811 chr2R 7174040 7174084 8 271 2.5 3.0 2.8 2.1 317 chr2R 7173767 intron pk + chr2R 7173926 intron pk + chr2R 7174084 intron pk + chr2R_8_7170001 chr2R_7170001 RAL-832 501 chr2R 7196552 7196573 chr2R 7201340 7201368 F-element 5 4794 8.0 0.0 4.0 1.0 4816 chr2R 7196552 intron pk + chr2R 7198960 intron pk + chr2R 7201368 intron pk + chr2R_5_7195001 chr2R_7195001 RAL-832 502 chr2R 7196576 7196588 chr2R 7201337 7201370 F-element 8 4787 4.5 0.0 2.2 2.5 4794 chr2R 7196576 intron pk + chr2R 7198973 intron pk + chr2R 7201370 intron pk + chr2R_8_7195001 chr2R_7195001 RAL-832 503 chr2R 7235810 7235837 chr2R 7240918 7240943 jockey 4 5103 5.0 2.5 3.8 0.8 5133 chr2R 7235810 intergenic not near genes chr2R 7238376 intergenic not near genes chr2R 7240943 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-832 504 chr2R 7417886 7418164 chr2R 7417992 7418248 10 96 3.5 4.5 4.0 2.0 362 chr2R 7417886 intergenic not near genes chr2R 7418067 intergenic not near genes chr2R 7418248 intergenic not near genes chr2R_10_7415001 chr2R_7415001 RAL-832 505 chr2R 7434890 7434912 chr2R 7439191 7439211 Juan 7 4311 1.0 4.5 2.8 1.8 4321 chr2R 7434890 intergenic so + chr2R 7437050 intergenic not near genes chr2R 7439211 intergenic not near genes chr2R_7_7435001 chr2R_7435001 RAL-832 506 chr2R 7629270 7629305 chr2R 7629410 7629443 9 136 3.5 2.0 2.8 2.4 173 chr2R 7629270 intron CG43340 + chr2R 7629356 intron CG43340 + chr2R 7629443 intron CG43340 + chr2R_9_7625001 chr2R_7625001 RAL-832 507 chr2R 7629306 7629316 chr2R 7629409 7629431 5 123 1.5 1.5 1.5 2.0 125 chr2R 7629306 intron CG43340 + chr2R 7629368 intron CG43340 + chr2R 7629431 intron CG43340 + chr2R_5_7625001 chr2R_7625001 RAL-832 508 chr2R 7642861 7642890 chr2R 7642949 7642985 11 93 2.5 2.5 2.5 3.1 124 chr2R 7642861 intron CG43340 + chr2R 7642923 intron CG43340 + chr2R 7642985 intron CG43340 + chr2R_11_7640001 chr2R_7640001 RAL-832 509 chr2R 7737893 7737903 chr2R 7737992 7738002 4 98 10.5 5.5 8.0 0.4 109 chr2R 7737893 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738002 intergenic not near genes chr2R_4_7735001 chr2R_7735001 RAL-832 510 chr2R 7787079 7787091 chr2R 7787181 7787193 5 102 7.0 1.0 4.0 1.0 114 chr2R 7787079 intron CanB2 + chr2R 7787136 intron CanB2 + chr2R 7787193 intron CanB2 + chr2R_5_7785001 chr2R_7785001 RAL-832 511 chr2R 7787093 7787114 chr2R 7787180 7787206 6 93 2.5 1.0 1.8 2.1 113 chr2R 7787093 intron CanB2 + chr2R 7787150 intron CanB2 + chr2R 7787206 intron CanB2 + chr2R_6_7785001 chr2R_7785001 RAL-832 512 chr2R 7815656 7815689 chr2R 7822140 7822170 Burdock 8 6479 5.0 1.5 3.2 1.9 6514 chr2R 7815656 intergenic CG1882 + chr2R 7818913 intergenic not near genes chr2R 7822170 3` UTR cathD - chr2R_8_7815001 chr2R_7815001 RAL-832 513 chr2R 7869174 7869217 chr2R 7873979 7873988 Doc 9 4795 2.5 2.0 2.2 2.8 4814 chr2R 7869174 intron Dgk - chr2R 7871581 intron Dgk - chr2R 7873988 intron Dgk - chr2R_9_7870001 chr2R_7870001 RAL-832 514 chr2R 7952140 7952165 chr2R 7952419 7952441 6 274 3.0 4.0 3.5 1.3 301 chr2R 7952140 intron CG14764 - chr2R 7952290 intron CG14764 - chr2R 7952441 intron CG14764 - chr2R_6_7950001 chr2R_7950001 RAL-832 515 chr2R 7999583 7999587 chr2R 7999686 7999690 4 102 0.5 1.5 1.0 2.0 107 chr2R 7999583 intergenic not near genes chr2R 7999636 intergenic not near genes chr2R 7999690 intergenic not near genes chr2R_4_7995001 chr2R_7995001 RAL-832 516 chr2R 8018111 8018143 chr2R 8018209 8018256 12 108 4.0 4.5 4.2 2.3 145 chr2R 8018111 intergenic not near genes chr2R 8018184 intergenic not near genes chr2R 8018256 intergenic not near genes chr2R_12_8015001 chr2R_8015001 RAL-832 517 chr2R 8026791 8026823 chr2R 8026887 8026919 8 96 6.0 3.5 4.8 1.4 128 chr2R 8026791 intergenic CR45267 + chr2R 8026855 intergenic CR45267 + chr2R 8026919 intergenic CR45267 + chr2R_8_8025001 chr2R_8025001 RAL-832 518 chr2R 8089243 8089288 chr2R 8089343 8089388 14 98 4.5 4.5 4.5 2.5 145 chr2R 8089243 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089388 intergenic sut2 +,sut3 + chr2R_14_8085001 chr2R_8085001 RAL-832 519 chr2R 8155570 8155601 chr2R 8155669 8155710 8 100 2.0 1.0 1.5 3.2 140 chr2R 8155570 intron,intron Lpin -,kermit - chr2R 8155640 intron,intron Lpin -,kermit - chr2R 8155710 intron,intron Lpin -,kermit - chr2R_8_8155001 chr2R_8155001 RAL-832 520 chr2R 8159151 8159184 chr2R 8159656 8159665 12 505 5.0 1.0 3.0 3.0 514 chr2R 8159151 intergenic CG8708 - chr2R 8159408 3` UTR CG8708 - chr2R 8159665 exon CG8708 - chr2R_12_8155001 chr2R_8155001 RAL-832 521 chr2R 8160930 8160951 chr2R 8161039 8161056 1360 5 99 1.5 9.0 5.2 0.8 126 chr2R 8160930 intron CG8708 - chr2R 8160993 intron CG8708 - chr2R 8161056 intron CG8708 - chr2R_5_8160001 chr2R_8160001 RAL-832 522 chr2R 8236025 8236058 chr2R 8236126 8236148 6 97 2.0 3.0 2.5 1.7 123 chr2R 8236025 intergenic not near genes chr2R 8236086 intergenic not near genes chr2R 8236148 intergenic not near genes chr2R_6_8235001 chr2R_8235001 RAL-832 523 chr2R 8330853 8330889 chr2R 8331347 8331395 roo 9 500 3.0 7.0 5.0 1.5 542 chr2R 8330853 intron pdm3 + chr2R 8331124 intron pdm3 + chr2R 8331395 intron pdm3 + chr2R_9_8330001 chr2R_8330001 RAL-832 524 chr2R 8368178 8368220 chr2R 8368266 8368320 7 87 2.0 5.5 3.8 1.5 142 chr2R 8368178 intron pdm3 + chr2R 8368249 intron pdm3 + chr2R 8368320 intron pdm3 + chr2R_7_8365001 chr2R_8365001 RAL-832 525 chr2R 8483948 8483985 chr2R 8484044 8484081 11 88 4.5 7.0 5.8 1.6 133 chr2R 8483948 intron mtt - chr2R 8484014 intron mtt - chr2R 8484081 intron mtt - chr2R_11_8480001 chr2R_8480001 RAL-832 526 chr2R 8489748 8489755 chr2R 8489827 8489837 4 86 6.0 12.5 9.2 0.4 89 chr2R 8489748 intron mtt - chr2R 8489792 intron mtt - chr2R 8489837 intron mtt - chr2R_4_8485001 chr2R_8485001 RAL-832 527 chr2R 8627734 8627738 chr2R 8627833 8627837 4 99 7.5 1.0 4.2 0.8 103 chr2R 8627734 intergenic beta3GalTII -,CG14749 + chr2R 8627786 intergenic CG14749 +,beta3GalTII - chr2R 8627837 intergenic CG14749 +,beta3GalTII - chr2R_4_8625001 chr2R_8625001 RAL-832 528 chr2R 8722742 8722785 chr2R 8723003 8723013 pogo 5 243 5.0 0.5 2.8 1.3 271 chr2R 8722742 intron CG14767 - chr2R 8722878 intron CG14767 - chr2R 8723013 intron CG14767 - chr2R_5_8720001 chr2R_8720001 RAL-832 529 chr2R 8941554 8941600 chr2R 8941662 8941681 9 101 1.0 4.0 2.5 2.6 127 chr2R 8941554 intergenic CR44273 +,CG13748 + chr2R 8941618 5` UTR CR44273 + chr2R 8941681 5` UTR CR44273 + chr2R_9_8940001 chr2R_8940001 RAL-832 530 chr2R 8967128 8967156 chr2R 8967223 8967264 5 103 3.5 8.5 6.0 0.7 136 chr2R 8967128 intron CG8216 - chr2R 8967196 intron CG8216 - chr2R 8967264 intron CG8216 - chr2R_5_8965001 chr2R_8965001 RAL-832 531 chr2R 9163347 9163366 chr2R 9165054 9165093 9 1718 0.0 6.5 3.2 2.1 1746 chr2R 9163347 exon CG8046 - chr2R 9164220 exon CG8046 - chr2R 9165093 intergenic CG8046 - chr2R_9_9160001 chr2R_9160001 RAL-832 532 chr2R 9212104 9212150 chr2R 9212215 9212261 9 103 2.0 2.5 2.2 2.8 157 chr2R 9212104 intergenic not near genes chr2R 9212182 intergenic not near genes chr2R 9212261 intergenic not near genes chr2R_9_9210001 chr2R_9210001 RAL-832 533 chr2R 9227853 9227895 chr2R 9227955 9227991 9 104 4.5 3.0 3.8 1.9 138 chr2R 9227853 3` UTR hig - chr2R 9227922 3` UTR hig - chr2R 9227991 3` UTR hig - chr2R_9_9225001 chr2R_9225001 RAL-832 534 chr2R 9480075 9480106 chr2R 9490610 9490655 roo 15 10548 3.5 3.5 3.5 3.3 10580 chr2R 9480075 intergenic not near genes chr2R 9485365 intergenic not near genes chr2R 9490655 intergenic not near genes chr2R_15_9485001 chr2R_9485001 RAL-832 535 chr2R 9493659 9493682 chr2R 9493789 9493802 4 124 3.0 0.0 1.5 1.6 143 chr2R 9493659 intergenic not near genes chr2R 9493730 intergenic Wnt2 + chr2R 9493802 intergenic Wnt2 + chr2R_4_9490001 chr2R_9490001 RAL-832 536 chr2R 9726613 9726640 chr2R 9734169 9734210 17.6 13 7565 5.5 5.5 5.5 2.0 7597 chr2R 9726613 intron sqa - chr2R 9730412 intron sqa - chr2R 9734210 intron sqa - chr2R_13_9730001 chr2R_9730001 RAL-832 537 chr2R 9869959 9870003 chr2R 9870049 9870068 12 91 3.5 5.5 4.5 2.2 109 chr2R 9869959 intron cbx - chr2R 9870014 intron cbx - chr2R 9870068 intron cbx - chr2R_12_9870001 chr2R_9870001 RAL-832 538 chr2R 9935005 9935059 chr2R 9935107 9935158 22 97 4.5 3.0 3.8 4.6 153 chr2R 9935005 intron Mef2 - chr2R 9935082 intron Mef2 - chr2R 9935158 intron Mef2 - chr2R_22_9935001 chr2R_9935001 RAL-832 539 chr2R 10001528 10001539 chr2R 10001611 10001642 4 98 2.5 5.0 3.8 0.8 114 chr2R 10001528 intron Pka-R2 - chr2R 10001585 intron Pka-R2 - chr2R 10001642 intron Pka-R2 - chr2R_4_10000001 chr2R_10000001 RAL-832 540 chr2R 10005542 10005581 chr2R 10005659 10005698 12 115 3.5 3.0 3.2 2.9 156 chr2R 10005542 intron Pka-R2 - chr2R 10005620 intron Pka-R2 - chr2R 10005698 intron Pka-R2 - chr2R_12_10005001 chr2R_10005001 RAL-832 541 chr2R 10047810 10047829 chr2R 10047902 10047932 5 99 7.0 1.5 4.2 1.0 122 chr2R 10047810 intron oys - chr2R 10047871 intron oys - chr2R 10047932 intron oys - chr2R_5_10045001 chr2R_10045001 RAL-832 542 chr2R 10053502 10053549 chr2R 10053625 10053662 9 118 4.5 6.0 5.2 1.5 160 chr2R 10053502 intron magu + chr2R 10053582 intron magu + chr2R 10053662 intron magu + chr2R_9_10050001 chr2R_10050001 RAL-832 543 chr2R 10086923 10086933 chr2R 10087017 10087049 5 103 1.5 6.0 3.8 1.0 126 chr2R 10086923 intron,exon CG2269 +,sut4 - chr2R 10086986 intron,5` UTR CG2269 +,sut4 - chr2R 10087049 intron,5` UTR CG2269 +,sut4 - chr2R_5_10085001 chr2R_10085001 RAL-832 544 chr2R 10122697 10122713 chr2R 10122857 10122878 9 164 3.0 4.5 3.8 1.9 181 chr2R 10122697 intergenic Ccs - chr2R 10122788 intergenic Ccs - chr2R 10122878 intergenic Ccs - chr2R_9_10120001 chr2R_10120001 RAL-832 545 chr2R 10132170 10132215 chr2R 10132270 10132304 7 94 2.5 3.5 3.0 1.8 134 chr2R 10132170 intron gem + chr2R 10132237 intron gem + chr2R 10132304 exon gem + chr2R_7_10130001 chr2R_10130001 RAL-832 546 chr2R 10160530 10160567 chr2R 10160628 10160675 16 106 4.5 4.0 4.2 3.1 145 chr2R 10160530 intron KCNQ - chr2R 10160602 intron KCNQ - chr2R 10160675 intron KCNQ - chr2R_16_10160001 chr2R_10160001 RAL-832 547 chr2R 10171116 10171123 chr2R 10171214 10171215 7 101 2.0 3.5 2.8 1.8 99 chr2R 10171116 intron KCNQ - chr2R 10171166 intron KCNQ - chr2R 10171215 intron KCNQ - chr2R_7_10170001 chr2R_10170001 RAL-832 548 chr2R 10171129 10171142 chr2R 10171194 10171246 5 96 1.5 2.0 1.8 1.8 117 chr2R 10171129 intron KCNQ - chr2R 10171188 intron KCNQ - chr2R 10171246 intron KCNQ - chr2R_5_10170001 chr2R_10170001 RAL-832 549 chr2R 10176893 10176906 chr2R 10186080 10186088 roo 5 9182 3.5 6.0 4.8 0.9 9195 chr2R 10176893 intron KCNQ - chr2R 10181490 intron KCNQ - chr2R 10186088 intron KCNQ - chr2R_5_10180001 chr2R_10180001 RAL-832 550 chr2R 10193209 10193232 chr2R 10193313 10193336 9 101 5.5 6.0 5.8 1.3 127 chr2R 10193209 intergenic not near genes chr2R 10193272 intergenic not near genes chr2R 10193336 intergenic not near genes chr2R_9_10190001 chr2R_10190001 RAL-832 551 chr2R 10203640 10203657 chr2R 10203734 10203762 9 103 4.5 2.0 3.2 2.1 122 chr2R 10203640 intergenic not near genes chr2R 10203701 intergenic not near genes chr2R 10203762 intergenic not near genes chr2R_9_10200001 chr2R_10200001 RAL-832 552 chr2R 10216168 10216217 chr2R 10216266 10216315 8 81 1.0 1.5 1.2 3.6 147 chr2R 10216168 intron,intron CG12912 -,Hr46 - chr2R 10216242 intron,intron CG12912 -,Hr46 - chr2R 10216315 intron,intron CG12912 -,Hr46 - chr2R_8_10215001 chr2R_10215001 RAL-832 553 chr2R 10251352 10251398 chr2R 10251446 10251496 18 92 5.0 9.5 7.2 2.2 144 chr2R 10251352 intron,intron CG12913 +,Syb - chr2R 10251424 intron,intron CG12913 +,Syb - chr2R 10251496 intron,intron CG12913 +,Syb - chr2R_18_10250001 chr2R_10250001 RAL-832 554 chr2R 10300633 10300680 chr2R 10300746 10300789 8 107 0.5 0.5 0.5 5.3 156 chr2R 10300633 intron CAP + chr2R 10300711 intron CAP + chr2R 10300789 intron CAP + chr2R_8_10300001 chr2R_10300001 RAL-832 555 chr2R 10307063 10307097 chr2R 10307156 10307193 8 94 8.0 3.5 5.8 1.2 130 chr2R 10307063 3` UTR JhI-1 - chr2R 10307128 3` UTR JhI-1 - chr2R 10307193 3` UTR JhI-1 - chr2R_8_10305001 chr2R_10305001 RAL-832 556 chr2R 10311604 10311640 chr2R 10312271 10312273 7 658 2.0 2.5 2.2 2.2 669 chr2R 10311604 intron Obp46a - chr2R 10311938 exon Obp46a - chr2R 10312273 intergenic Obp46a - chr2R_7_10310001 chr2R_10310001 RAL-832 557 chr2R 10313315 10313341 chr2R 10313408 10313449 13 101 2.5 8.5 5.5 2.0 134 chr2R 10313315 intergenic not near genes chr2R 10313382 intergenic not near genes chr2R 10313449 intergenic Ndg + chr2R_13_10310001 chr2R_10310001 RAL-832 558 chr2R 10352679 10352703 chr2R 10352755 10352800 7 79 1.5 3.5 2.5 2.0 121 chr2R 10352679 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352740 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352800 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_7_10350001 chr2R_10350001 RAL-832 559 chr2R 10409066 10409082 chr2R 10409137 10409177 9 90 1.0 4.5 2.8 2.4 111 chr2R 10409066 intron CG42732 - chr2R 10409122 intron CG42732 - chr2R 10409177 intron,exon CG42732 -,CG33477 - chr2R_9_10405001 chr2R_10405001 RAL-832 560 chr2R 10429001 10429049 chr2R 10429098 10429100 12 80 4.5 4.5 4.5 2.2 99 chr2R 10429001 intergenic not near genes chr2R 10429050 intergenic not near genes chr2R 10429100 intergenic not near genes chr2R_12_10425001 chr2R_10425001 RAL-832 561 chr2R 10432103 10432156 chr2R 10432234 10432270 14 125 5.0 3.0 4.0 2.8 167 chr2R 10432103 intron RanBPM + chr2R 10432186 intron RanBPM + chr2R 10432270 intron RanBPM + chr2R_14_10430001 chr2R_10430001 RAL-832 562 chr2R 10454106 10454126 chr2R 10454175 10454203 7 84 4.0 5.5 4.8 1.2 97 chr2R 10454106 intron,intron Galphao +,Cyp49a1 - chr2R 10454154 intron,intron Galphao +,Cyp49a1 - chr2R 10454203 intron,intron Galphao +,Cyp49a1 - chr2R_7_10450001 chr2R_10450001 RAL-832 563 chr2R 10469006 10469049 chr2R 10469147 10469187 11 140 2.0 3.0 2.5 3.1 181 chr2R 10469006 intron CG11777 + chr2R 10469096 intron CG11777 + chr2R 10469187 intron CG11777 + chr2R_11_10465001 chr2R_10465001 RAL-832 564 chr2R 10551042 10551173 chr2R 10551153 10551312 6 112 0.0 0.0 0.0 6.0 270 chr2R 10551042 intergenic not near genes chr2R 10551177 intergenic not near genes chr2R 10551312 intergenic not near genes chr2R_6_10550001 chr2R_10550001 RAL-832 565 chr2R 10562987 10563255 chr2R 10563085 10563350 15 101 0.0 0.5 0.2 12.5 363 chr2R 10562987 intron psq + chr2R 10563168 intron psq + chr2R 10563350 intron psq + chr2R_15_10560001 chr2R_10560001 RAL-832 566 chr2R 10582099 10582146 chr2R 10582208 10582244 10 108 2.5 0.5 1.5 4.0 145 chr2R 10582099 intron psq + chr2R 10582172 intron psq + chr2R 10582244 intron psq + chr2R_10_10580001 chr2R_10580001 RAL-832 567 chr2R 10659033 10659052 chr2R 10666668 10666687 mdg1 6 7634 0.0 3.0 1.5 2.4 7654 chr2R 10659033 intergenic not near genes chr2R 10662860 intergenic not near genes chr2R 10666687 intergenic not near genes chr2R_6_10660001 chr2R_10660001 RAL-832 568 chr2R 10728194 10728220 chr2R 10728294 10728338 14 109 0.0 4.0 2.0 4.7 144 chr2R 10728194 intron Rab3 - chr2R 10728266 intron Rab3 - chr2R 10728338 intron Rab3 - chr2R_14_10725001 chr2R_10725001 RAL-832 569 chr2R 10761539 10761566 chr2R 10761713 10761740 7 171 3.5 1.5 2.5 2.0 201 chr2R 10761539 intron,5` UTR CG33144 -,CR43605 + chr2R 10761640 intron,5` UTR CG33144 -,CR43605 + chr2R 10761740 intron CG33144 - chr2R_7_10760001 chr2R_10760001 RAL-832 570 chr2R 10761572 10761589 chr2R 10761709 10761763 6 165 1.0 1.5 1.2 2.7 191 chr2R 10761572 intron,5` UTR CG33144 -,CR43605 + chr2R 10761668 intron,5` UTR CG33144 -,CR43605 + chr2R 10761763 intron CG33144 - chr2R_6_10760001 chr2R_10760001 RAL-832 571 chr2R 10770992 10771020 chr2R 10771087 10771121 6 100 1.5 3.0 2.2 1.9 129 chr2R 10770992 intron CG33144 - chr2R 10771056 intron CG33144 - chr2R 10771121 intron CG33144 - chr2R_6_10770001 chr2R_10770001 RAL-832 572 chr2R 10958741 10958757 chr2R 10958899 10958915 4 156 4.5 3.5 4.0 0.8 174 chr2R 10958741 intergenic not near genes chr2R 10958828 intergenic not near genes chr2R 10958915 intergenic not near genes chr2R_4_10955001 chr2R_10955001 RAL-832 573 chr2R 10958762 10958783 chr2R 10958890 10958941 12 148 3.5 2.5 3.0 3.0 179 chr2R 10958762 intergenic not near genes chr2R 10958852 intergenic not near genes chr2R 10958941 intergenic not near genes chr2R_12_10955001 chr2R_10955001 RAL-832 574 chr2R 10959070 10959104 chr2R 10959169 10959201 7 94 4.0 1.5 2.8 1.8 131 chr2R 10959070 intergenic not near genes chr2R 10959136 intergenic not near genes chr2R 10959201 intergenic not near genes chr2R_7_10955001 chr2R_10955001 RAL-832 575 chr2R 10974834 10974855 chr2R 10974936 10974947 5 100 7.5 6.0 6.8 0.6 113 chr2R 10974834 intergenic not near genes chr2R 10974890 intergenic not near genes chr2R 10974947 intergenic not near genes chr2R_5_10970001 chr2R_10970001 RAL-832 576 chr2R 10974858 10974885 chr2R 10974932 10974982 11 93 4.5 6.0 5.2 1.8 124 chr2R 10974858 intergenic not near genes chr2R 10974920 intergenic not near genes chr2R 10974982 intergenic not near genes chr2R_11_10970001 chr2R_10970001 RAL-832 577 chr2R 10979648 10979682 chr2R 10980133 10980172 297 6 477 1.0 5.0 3.0 1.5 524 chr2R 10979648 intergenic not near genes chr2R 10979910 intergenic not near genes chr2R 10980172 intergenic not near genes chr2R_6_10975001 chr2R_10975001 RAL-832 578 chr2R 11009800 11009811 chr2R 11018994 11019004 roo 4 9192 7.0 1.5 4.2 0.8 9204 chr2R 11009800 intron luna - chr2R 11014402 intron luna - chr2R 11019004 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-832 579 chr2R 11009816 11009840 chr2R 11018986 11019002 roo 5 9171 2.5 0.5 1.5 2.0 9186 chr2R 11009816 intron luna - chr2R 11014409 intron luna - chr2R 11019002 intron luna - chr2R_5_11010001 chr2R_11010001 RAL-832 580 chr2R 11194767 11194789 chr2R 11194872 11194917 4 122 2.5 5.0 3.8 0.8 150 chr2R 11194767 intron shn + chr2R 11194842 intron shn + chr2R 11194917 intron shn + chr2R_4_11190001 chr2R_11190001 RAL-832 581 chr2R 11207816 11207840 chr2R 11208023 11208031 BS 6 205 6.5 11.5 9.0 0.6 215 chr2R 11207816 intron shn + chr2R 11207924 intron shn + chr2R 11208031 intron shn + chr2R_6_11205001 chr2R_11205001 RAL-832 582 chr2R 11260505 11260551 chr2R 11260625 11260651 7 116 2.5 1.5 2.0 2.3 146 chr2R 11260505 intergenic not near genes chr2R 11260578 intergenic Cpr47Ed - chr2R 11260651 intergenic Cpr47Ed - chr2R_7_11260001 chr2R_11260001 RAL-832 583 chr2R 11336582 11336589 chr2R 11336685 11336689 4 102 12.0 8.0 10.0 0.4 107 chr2R 11336582 intergenic sha +,lambdaTry + chr2R 11336636 intergenic sha +,lambdaTry + chr2R 11336689 intergenic lambdaTry +,sha + chr2R_4_11335001 chr2R_11335001 RAL-832 584 chr2R 11336597 11336599 chr2R 11336680 11336687 4 89 10.0 7.0 8.5 0.4 90 chr2R 11336597 intergenic sha +,lambdaTry + chr2R 11336642 intergenic sha +,lambdaTry + chr2R 11336687 intergenic lambdaTry +,sha + chr2R_4_11335001 chr2R_11335001 RAL-832 585 chr2R 11415549 11415551 chr2R 11418665 11418700 opus 4 3134 1.5 2.0 1.8 1.4 3151 chr2R 11415549 intron Drip - chr2R 11417124 intron Drip - chr2R 11418700 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-832 586 chr2R 11472631 11472679 chr2R 11473850 11473896 pogo 7 1210 2.0 4.0 3.0 1.8 1265 chr2R 11472631 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473896 intergenic not near genes chr2R_7_11470001 chr2R_11470001 RAL-832 587 chr2R 11480792 11480834 chr2R 11480895 11480937 17 99 0.5 3.0 1.8 6.1 145 chr2R 11480792 intron inv + chr2R 11480864 intron inv + chr2R 11480937 intron inv + chr2R_17_11480001 chr2R_11480001 RAL-832 588 chr2R 11660353 11660390 chr2R 11660489 11660526 6 134 1.5 3.0 2.2 1.9 173 chr2R 11660353 intron Roc2 - chr2R 11660440 intron Roc2 - chr2R 11660526 intron Roc2 - chr2R_6_11660001 chr2R_11660001 RAL-832 589 chr2R 12004187 12004215 chr2R 12004285 12004315 7 98 2.0 1.5 1.8 2.5 128 chr2R 12004187 exon otk - chr2R 12004251 intron otk - chr2R 12004315 intron otk - chr2R_7_12000001 chr2R_12000001 RAL-832 590 chr2R 12185980 12186033 chr2R 12186095 12186143 21 110 6.5 10.5 8.5 2.2 163 chr2R 12185980 intron Cyp6g1 + chr2R 12186062 intron Cyp6g1 + chr2R 12186143 intron Cyp6g1 + chr2R_21_12185001 chr2R_12185001 RAL-832 591 chr2R 12187474 12187476 chr2R 12190088 12190124 9 2629 17.0 16.5 16.8 0.5 2650 chr2R 12187474 exon Cyp6g1 + chr2R 12188799 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_9_12185001 chr2R_12185001 RAL-832 592 chr2R 12285389 12285411 chr2R 12285506 12285526 10 116 2.0 0.0 1.0 5.0 137 chr2R 12285389 intron CG42700 + chr2R 12285458 intron CG42700 + chr2R 12285526 intron CG42700 + chr2R_10_12285001 chr2R_12285001 RAL-832 593 chr2R 12363362 12363408 chr2R 12363814 12363850 15 447 3.5 2.0 2.8 3.9 488 chr2R 12363362 intergenic CG30043 + chr2R 12363606 intergenic CG30043 + chr2R 12363850 intergenic not near genes chr2R_15_12360001 chr2R_12360001 RAL-832 594 chr2R 12377484 12377515 chr2R 12377616 12377640 9 136 6.0 3.0 4.5 1.6 156 chr2R 12377484 intergenic Cpr49Aa + chr2R 12377562 intergenic Cpr49Aa + chr2R 12377640 intergenic Cpr49Aa + chr2R_9_12375001 chr2R_12375001 RAL-832 595 chr2R 12625973 12625997 chr2R 12626134 12626158 5 160 0.0 3.5 1.8 1.8 185 chr2R 12625973 5` UTR CG17760 + chr2R 12626066 5` UTR CG17760 + chr2R 12626158 intron CG17760 + chr2R_5_12625001 chr2R_12625001 RAL-832 596 chr2R 12627489 12627501 chr2R 12627582 12627614 4 105 0.0 3.5 1.8 1.4 125 chr2R 12627489 intron CG17760 + chr2R 12627552 intron CG17760 + chr2R 12627614 exon CG17760 + chr2R_4_12625001 chr2R_12625001 RAL-832 597 chr2R 12707520 12707545 chr2R 12715889 12715930 roo 11 8381 6.0 4.5 5.2 1.8 8410 chr2R 12707520 intron CG42663 + chr2R 12711725 intron CG42663 + chr2R 12715930 intron CG42663 + chr2R_11_12710001 chr2R_12710001 RAL-832 598 chr2R 12845397 12845437 chr2R 12845498 12845508 4 90 3.5 1.0 2.2 1.2 111 chr2R 12845397 intergenic CG17575 - chr2R 12845452 intergenic CG17575 - chr2R 12845508 intergenic CG17575 - chr2R_4_12845001 chr2R_12845001 RAL-832 599 chr2R 12897461 12897479 chr2R 12897557 12897590 7 104 0.5 0.5 0.5 4.7 129 chr2R 12897461 intron vg + chr2R 12897526 intron vg + chr2R 12897590 intron vg + chr2R_7_12895001 chr2R_12895001 RAL-832 600 chr2R 13167414 13167461 chr2R 13167523 13167559 12 107 5.0 0.0 2.5 3.4 145 chr2R 13167414 intron GLaz - chr2R 13167486 intron GLaz - chr2R 13167559 intron GLaz - chr2R_12_13165001 chr2R_13165001 RAL-832 601 chr2R 13220537 13220544 chr2R 13220646 13220653 4 108 0.0 3.5 1.8 1.4 116 chr2R 13220537 intron CG17059 + chr2R 13220595 intron CG17059 + chr2R 13220653 intron CG17059 + chr2R_4_13220001 chr2R_13220001 RAL-832 602 chr2R 13261147 13261177 chr2R 13261257 13261292 12 110 5.0 6.5 5.8 1.8 145 chr2R 13261147 intron CG42319 + chr2R 13261220 intron CG42319 + chr2R 13261292 intron CG42319 + chr2R_12_13260001 chr2R_13260001 RAL-832 603 chr2R 13369749 13369765 chr2R 13369845 13369861 4 95 0.0 1.0 0.5 2.7 112 chr2R 13369749 intergenic not near genes chr2R 13369805 intergenic not near genes chr2R 13369861 intergenic not near genes chr2R_4_13365001 chr2R_13365001 RAL-832 604 chr2R 13431491 13431519 chr2R 13431583 13431618 4 97 3.5 4.5 4.0 0.8 127 chr2R 13431491 intron CG42321 - chr2R 13431554 intron CG42321 - chr2R 13431618 intron CG42321 - chr2R_4_13430001 chr2R_13430001 RAL-832 605 chr2R 13547072 13547106 chr2R 13547287 13547321 9 215 2.0 6.0 4.0 1.8 249 chr2R 13547072 intron CG6145 - chr2R 13547196 intron CG6145 - chr2R 13547321 intron CG6145 - chr2R_9_13545001 chr2R_13545001 RAL-832 606 chr2R 13566243 13566289 chr2R 13566340 13566372 12 90 0.5 0.0 0.2 10.0 129 chr2R 13566243 intergenic not near genes chr2R 13566308 intergenic not near genes chr2R 13566372 intergenic not near genes chr2R_12_13565001 chr2R_13565001 RAL-832 607 chr2R 13649971 13649988 chr2R 13650116 13650163 6 168 5.0 5.0 5.0 1.0 192 chr2R 13649971 intron fas + chr2R 13650067 intron fas + chr2R 13650163 intron fas + chr2R_6_13650001 chr2R_13650001 RAL-832 608 chr2R 13728122 13728161 chr2R 13735789 13735838 opus 14 7674 7.0 7.0 7.0 1.8 7716 chr2R 13728122 intron fas + chr2R 13731980 intron fas + chr2R 13735838 intron fas + chr2R_14_13730001 chr2R_13730001 RAL-832 609 chr2R 13768975 13768999 chr2R 13769094 13769116 4 116 2.0 4.0 3.0 1.0 141 chr2R 13768975 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769116 intergenic not near genes chr2R_4_13765001 chr2R_13765001 RAL-832 610 chr2R 14018155 14018188 chr2R 14018246 14018279 10 98 7.5 6.5 7.0 1.2 124 chr2R 14018155 intron mam + chr2R 14018217 intron mam + chr2R 14018279 intron mam + chr2R_10_14015001 chr2R_14015001 RAL-832 611 chr2R 14141938 14141951 chr2R 14142063 14142076 4 125 5.0 6.5 5.8 0.6 138 chr2R 14141938 intergenic not near genes chr2R 14142007 intergenic not near genes chr2R 14142076 intergenic not near genes chr2R_4_14140001 chr2R_14140001 RAL-832 612 chr2R 14142430 14142439 chr2R 14142540 14142549 4 108 8.0 3.5 5.8 0.6 119 chr2R 14142430 intergenic not near genes chr2R 14142490 intergenic not near genes chr2R 14142549 intergenic not near genes chr2R_4_14140001 chr2R_14140001 RAL-832 613 chr2R 14142442 14142471 chr2R 14142537 14142581 12 105 3.0 3.0 3.0 3.0 139 chr2R 14142442 intergenic not near genes chr2R 14142512 intergenic not near genes chr2R 14142581 intergenic not near genes chr2R_12_14140001 chr2R_14140001 RAL-832 614 chr2R 14357535 14357576 chr2R 14357645 14357686 8 107 6.5 9.5 8.0 0.9 151 chr2R 14357535 intergenic CG8617 -,Arc1 - chr2R 14357610 intergenic Arc1 -,CG8617 - chr2R 14357686 intergenic Arc1 -,CG8617 - chr2R_8_14355001 chr2R_14355001 RAL-832 615 chr2R 14393855 14393893 chr2R 14393950 14393963 6 87 4.0 2.5 3.2 1.4 108 chr2R 14393855 intergenic not near genes chr2R 14393909 intergenic not near genes chr2R 14393963 intergenic not near genes chr2R_6_14390001 chr2R_14390001 RAL-832 616 chr2R 14400345 14400377 chr2R 14400463 14400482 8 114 2.0 5.5 3.8 1.7 137 chr2R 14400345 intergenic not near genes chr2R 14400414 intergenic not near genes chr2R 14400482 intergenic not near genes chr2R_8_14400001 chr2R_14400001 RAL-832 617 chr2R 14405406 14405453 chr2R 14405783 14405815 10 374 1.5 4.0 2.8 2.6 409 chr2R 14405406 intergenic not near genes chr2R 14405610 intergenic not near genes chr2R 14405815 intergenic not near genes chr2R_10_14405001 chr2R_14405001 RAL-832 618 chr2R 14426812 14426821 chr2R 14426923 14426932 4 111 5.5 2.0 3.8 0.8 120 chr2R 14426812 intergenic not near genes chr2R 14426872 intergenic phyl - chr2R 14426932 intergenic phyl - chr2R_4_14425001 chr2R_14425001 RAL-832 619 chr2R 14426825 14426853 chr2R 14426915 14426959 6 106 4.0 1.5 2.8 1.6 134 chr2R 14426825 intergenic not near genes chr2R 14426892 intergenic phyl - chr2R 14426959 intergenic phyl - chr2R_6_14425001 chr2R_14425001 RAL-832 620 chr2R 14497383 14497418 chr2R 14498554 14498597 1360 17 1182 4.5 6.0 5.2 2.7 1214 chr2R 14497383 3` UTR Cpsf160 - chr2R 14497990 intron Cpsf160 - chr2R 14498597 3` UTR Cpsf160 - chr2R_17_14495001 chr2R_14495001 RAL-832 621 chr2R 14511740 14511775 chr2R 14511841 14511876 9 100 4.5 6.0 5.2 1.5 136 chr2R 14511740 3` UTR Asx + chr2R 14511808 3` UTR Asx + chr2R 14511876 3` UTR Asx + chr2R_9_14510001 chr2R_14510001 RAL-832 622 chr2R 14530349 14530359 chr2R 14530458 14530468 4 109 5.0 3.0 4.0 0.8 119 chr2R 14530349 intron ttv + chr2R 14530408 intron ttv + chr2R 14530468 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-832 623 chr2R 14530361 14530374 chr2R 14530456 14530468 4 95 2.0 3.0 2.5 1.1 107 chr2R 14530361 intron ttv + chr2R 14530414 intron ttv + chr2R 14530468 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-832 624 chr2R 14565541 14565590 chr2R 14565638 14565687 7 95 3.0 2.0 2.5 2.0 146 chr2R 14565541 intron ttv + chr2R 14565614 intron ttv + chr2R 14565687 intron ttv + chr2R_7_14565001 chr2R_14565001 RAL-832 625 chr2R 14623878 14623894 chr2R 14623983 14624009 6 112 0.0 5.5 2.8 1.6 131 chr2R 14623878 intron Uhg5 + chr2R 14623944 5` UTR Uhg5 + chr2R 14624009 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703c + chr2R_6_14620001 chr2R_14620001 RAL-832 626 chr2R 14729950 14729968 chr2R 14730054 14730072 5 104 7.0 6.0 6.5 0.7 122 chr2R 14729950 intergenic not near genes chr2R 14730011 intergenic not near genes chr2R 14730072 intergenic not near genes chr2R_5_14730001 chr2R_14730001 RAL-832 627 chr2R 14729970 14729990 chr2R 14730051 14730073 7 80 4.0 5.5 4.8 1.2 103 chr2R 14729970 intergenic not near genes chr2R 14730022 intergenic not near genes chr2R 14730073 intergenic not near genes chr2R_7_14730001 chr2R_14730001 RAL-832 628 chr2R 14746487 14746539 chr2R 14746626 14746678 9 134 1.5 2.0 1.8 3.2 191 chr2R 14746487 3` UTR Dro + chr2R 14746582 3` UTR Dro + chr2R 14746678 3` UTR Dro + chr2R_9_14745001 chr2R_14745001 RAL-832 629 chr2R 14778968 14779013 chr2R 14779122 14779140 12 144 5.5 1.0 3.2 2.9 172 chr2R 14778968 intron kn - chr2R 14779054 intron kn - chr2R 14779140 intron kn - chr2R_12_14775001 chr2R_14775001 RAL-832 630 chr2R 14796321 14796359 chr2R 14796438 14796476 16 116 6.0 6.5 6.2 2.2 155 chr2R 14796321 intron kn - chr2R 14796398 intron kn - chr2R 14796476 intron kn - chr2R_16_14795001 chr2R_14795001 RAL-832 631 chr2R 14803462 14803506 chr2R 14803557 14803606 8 95 3.5 5.0 4.2 1.5 144 chr2R 14803462 intron kn - chr2R 14803534 intron kn - chr2R 14803606 intron kn - chr2R_8_14800001 chr2R_14800001 RAL-832 632 chr2R 14817678 14817713 chr2R 14817764 14817820 14 97 4.0 4.0 4.0 2.8 142 chr2R 14817678 intergenic CG10202 - chr2R 14817749 intergenic CG10202 - chr2R 14817820 intergenic CG10202 - chr2R_14_14815001 chr2R_14815001 RAL-832 633 chr2R 14889202 14889222 chr2R 14897820 14897833 Max-element 5 8616 7.5 0.0 3.8 1.0 8631 chr2R 14889202 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897833 intergenic not near genes chr2R_5_14890001 chr2R_14890001 RAL-832 634 chr2R 14911698 14911728 chr2R 14911841 14911871 5 143 1.5 8.0 4.8 0.9 173 chr2R 14911698 intron CG10249 - chr2R 14911784 intron CG10249 - chr2R 14911871 intron CG10249 - chr2R_5_14910001 chr2R_14910001 RAL-832 635 chr2R 14925042 14925066 chr2R 14925217 14925229 9 173 10.5 5.0 7.8 1.0 187 chr2R 14925042 intron CG10249 - chr2R 14925136 intron CG10249 - chr2R 14925229 intron CG10249 - chr2R_9_14925001 chr2R_14925001 RAL-832 636 chr2R 14925067 14925082 chr2R 14925214 14925259 7 168 6.0 4.5 5.2 1.1 192 chr2R 14925067 intron CG10249 - chr2R 14925163 intron CG10249 - chr2R 14925259 intron CG10249 - chr2R_7_14925001 chr2R_14925001 RAL-832 637 chr2R 14947347 14947397 chr2R 14947524 14947559 11 171 2.5 3.0 2.8 2.9 212 chr2R 14947347 intron aPKC - chr2R 14947453 intron aPKC - chr2R 14947559 intron aPKC - chr2R_11_14945001 chr2R_14945001 RAL-832 638 chr2R 15004711 15004762 chr2R 15005057 15005085 jockey 15 339 0.5 8.0 4.2 2.9 374 chr2R 15004711 intergenic not near genes chr2R 15004898 intergenic not near genes chr2R 15005085 intergenic not near genes chr2R_15_15000001 chr2R_15000001 RAL-832 639 chr2R 15015461 15015485 chr2R 15022884 15022912 mdg1 12 7431 1.0 2.0 1.5 4.8 7451 chr2R 15015461 intron hbs + chr2R 15019186 intron hbs + chr2R 15022912 intron hbs + chr2R_12_15015001 chr2R_15015001 RAL-832 640 chr2R 15084975 15085009 chr2R 15092038 15092066 297 5 7064 2.5 4.0 3.2 1.2 7091 chr2R 15084975 intergenic not near genes chr2R 15088520 intergenic not near genes chr2R 15092066 5` UTR CR44457 + chr2R_5_15085001 chr2R_15085001 RAL-832 641 chr2R 15101029 15101044 chr2R 15101106 15101135 9 94 2.5 1.5 2.0 3.0 106 chr2R 15101029 intergenic not near genes chr2R 15101082 intergenic not near genes chr2R 15101135 intergenic not near genes chr2R_9_15100001 chr2R_15100001 RAL-832 642 chr2R 15103893 15103924 chr2R 15104014 15104035 5 117 4.0 4.0 4.0 1.0 142 chr2R 15103893 intergenic not near genes chr2R 15103964 intergenic not near genes chr2R 15104035 intergenic not near genes chr2R_5_15100001 chr2R_15100001 RAL-832 643 chr2R 15119296 15119346 chr2R 15127797 15127846 Tirant 12 8487 1.5 2.5 2.0 4.0 8550 chr2R 15119296 intron chn + chr2R 15123571 intron chn + chr2R 15127846 intron chn + chr2R_12_15120001 chr2R_15120001 RAL-832 644 chr2R 15137968 15137988 chr2R 15138053 15138090 4 95 5.0 0.0 2.5 1.1 122 chr2R 15137968 intron chn + chr2R 15138029 intron chn + chr2R 15138090 intron chn + chr2R_4_15135001 chr2R_15135001 RAL-832 645 chr2R 15259051 15259093 chr2R 15259154 15259172 19 99 4.0 5.0 4.5 3.5 121 chr2R 15259051 intron ItgalphaPS4 + chr2R 15259112 intron ItgalphaPS4 + chr2R 15259172 intron ItgalphaPS4 + chr2R_19_15255001 chr2R_15255001 RAL-832 646 chr2R 15374792 15375050 chr2R 15374892 15375190 4 112 1.0 3.5 2.2 1.2 398 chr2R 15374792 intergenic not near genes chr2R 15374991 intergenic not near genes chr2R 15375190 intergenic not near genes chr2R_4_15370001 chr2R_15370001 RAL-832 647 chr2R 15390006 15390013 chr2R 15390136 15390143 4 130 2.0 2.5 2.2 1.2 137 chr2R 15390006 intergenic not near genes chr2R 15390074 intergenic not near genes chr2R 15390143 intergenic not near genes chr2R_4_15390001 chr2R_15390001 RAL-832 648 chr2R 15511135 15511164 chr2R 15511231 15511251 7 94 5.0 4.5 4.8 1.2 116 chr2R 15511135 intergenic not near genes chr2R 15511193 intergenic not near genes chr2R 15511251 intergenic GalNAc-T1 + chr2R_7_15510001 chr2R_15510001 RAL-832 649 chr2R 15810045 15810076 chr2R 15810315 15810369 7 279 2.0 2.5 2.2 2.2 324 chr2R 15810045 intron,intron Zasp52 -,tun + chr2R 15810207 intron,intron Zasp52 -,tun + chr2R 15810369 intron,intron Zasp52 -,tun + chr2R_7_15810001 chr2R_15810001 RAL-832 650 chr2R 15891797 15891834 chr2R 15891893 15891928 6 93 0.5 2.5 1.5 2.4 131 chr2R 15891797 intron sli - chr2R 15891862 intron sli - chr2R 15891928 intron sli - chr2R_6_15890001 chr2R_15890001 RAL-832 651 chr2R 16245411 16245427 chr2R 16245509 16245535 8 108 0.0 7.5 3.8 1.7 124 chr2R 16245411 intron CngA - chr2R 16245473 intron CngA - chr2R 16245535 intron CngA - chr2R_8_16245001 chr2R_16245001 RAL-832 652 chr2R 16352846 16352867 chr2R 16352949 16352964 9 102 3.0 6.0 4.5 1.6 118 chr2R 16352846 intergenic not near genes chr2R 16352905 intergenic not near genes chr2R 16352964 intergenic not near genes chr2R_9_16350001 chr2R_16350001 RAL-832 653 chr2R 16518042 16518066 chr2R 16518128 16518162 5 91 6.0 3.0 4.5 0.9 120 chr2R 16518042 intron Sema-2a + chr2R 16518102 intron Sema-2a + chr2R 16518162 intron Sema-2a + chr2R_5_16515001 chr2R_16515001 RAL-832 654 chr2R 16538077 16538087 chr2R 16538190 16538201 6 112 2.5 4.0 3.2 1.4 124 chr2R 16538077 intergenic not near genes chr2R 16538139 intergenic not near genes chr2R 16538201 intergenic not near genes chr2R_6_16535001 chr2R_16535001 RAL-832 655 chr2R 16544848 16544868 chr2R 16544952 16544963 5 103 0.0 0.0 0.0 5.0 115 chr2R 16544848 intergenic not near genes chr2R 16544906 intergenic not near genes chr2R 16544963 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-832 656 chr2R 16571855 16571904 chr2R 16571970 16572008 18 111 2.5 4.5 3.5 4.0 153 chr2R 16571855 intergenic CG4927 + chr2R 16571932 intergenic CG4927 + chr2R 16572008 intergenic CG4927 + chr2R_18_16570001 chr2R_16570001 RAL-832 657 chr2R 16705207 16705255 chr2R 16705355 16705403 11 138 3.0 3.5 3.2 2.6 196 chr2R 16705207 intron CG30463 - chr2R 16705305 intron CG30463 - chr2R 16705403 intron CG30463 - chr2R_11_16705001 chr2R_16705001 RAL-832 658 chr2R 16775629 16775653 chr2R 16775911 16775937 4 278 5.5 5.0 5.2 0.6 308 chr2R 16775629 3` UTR Arp53D + chr2R 16775783 intergenic Arp53D + chr2R 16775937 intergenic Arp53D + chr2R_4_16775001 chr2R_16775001 RAL-832 659 chr2R 16775662 16775674 chr2R 16775906 16775938 6 272 2.0 5.0 3.5 1.3 276 chr2R 16775662 3` UTR Arp53D + chr2R 16775800 intergenic Arp53D + chr2R 16775938 intergenic Arp53D + chr2R_6_16775001 chr2R_16775001 RAL-832 660 chr2R 16787461 16787486 chr2R 16787563 16787588 8 96 9.5 1.5 5.5 1.2 127 chr2R 16787461 intron CG5522 + chr2R 16787524 intron CG5522 + chr2R 16787588 intron CG5522 + chr2R_8_16785001 chr2R_16785001 RAL-832 661 chr2R 16972429 16972457 chr2R 16972536 16972574 4 110 3.0 2.5 2.8 1.1 145 chr2R 16972429 intergenic not near genes chr2R 16972502 intergenic not near genes chr2R 16972574 intergenic not near genes chr2R_4_16970001 chr2R_16970001 RAL-832 662 chr2R 16975191 16975217 chr2R 16975286 16975291 4 91 4.5 5.5 5.0 0.7 100 chr2R 16975191 intron Cbp53E + chr2R 16975241 intron Cbp53E + chr2R 16975291 intron Cbp53E + chr2R_4_16975001 chr2R_16975001 RAL-832 663 chr2R 17147226 17147268 chr2R 17152277 17152302 jockey 14 5048 3.0 3.5 3.2 3.3 5076 chr2R 17147226 intergenic not near genes chr2R 17149764 intergenic not near genes chr2R 17152302 intergenic not near genes chr2R_14_17145001 chr2R_17145001 RAL-832 664 chr2R 17152712 17152742 chr2R 17152856 17152876 6 140 2.5 3.5 3.0 1.5 164 chr2R 17152712 intergenic not near genes chr2R 17152794 intergenic not near genes chr2R 17152876 intergenic not near genes chr2R_6_17150001 chr2R_17150001 RAL-832 665 chr2R 17169205 17169229 chr2R 17169313 17169337 8 108 1.5 1.0 1.2 3.6 132 chr2R 17169205 intergenic not near genes chr2R 17169271 intergenic not near genes chr2R 17169337 intergenic not near genes chr2R_8_17165001 chr2R_17165001 RAL-832 666 chr2R 17176366 17176379 chr2R 17182576 17182589 diver 4 6210 1.0 8.0 4.5 0.7 6223 chr2R 17176366 intergenic not near genes chr2R 17179478 intergenic not near genes chr2R 17182589 intergenic not near genes chr2R_4_17175001 chr2R_17175001 RAL-832 667 chr2R 17419917 17419964 chr2R 17420021 17420062 4 101 0.0 0.5 0.2 3.3 145 chr2R 17419917 5` UTR cnk - chr2R 17419990 5` UTR cnk - chr2R 17420062 intergenic cnk -,l(2)k01209 + chr2R_4_17415001 chr2R_17415001 RAL-832 668 chr2R 17458985 17459035 chr2R 17459090 17459140 21 102 3.5 5.0 4.2 4.0 155 chr2R 17458985 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459140 intron CG14478 + chr2R_21_17455001 chr2R_17455001 RAL-832 669 chr2R 17459173 17459202 chr2R 17459407 17459443 14 248 6.0 4.0 5.0 2.3 270 chr2R 17459173 intron CG14478 + chr2R 17459308 intron CG14478 + chr2R 17459443 intron CG14478 + chr2R_14_17455001 chr2R_17455001 RAL-832 670 chr2R 17470301 17470353 chr2R 17470401 17470453 8 98 4.5 1.0 2.8 2.1 152 chr2R 17470301 intron qkr54B + chr2R 17470377 intron qkr54B + chr2R 17470453 intron qkr54B + chr2R_8_17470001 chr2R_17470001 RAL-832 671 chr2R 17485903 17485952 chr2R 17490677 17490724 F-element 7 4775 4.0 0.0 2.0 2.3 4821 chr2R 17485903 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488314 intron NT5E-2 + chr2R 17490724 intron NT5E-2 + chr2R_7_17485001 chr2R_17485001 RAL-832 672 chr2R 17679583 17679601 chr2R 17679730 17679748 4 147 0.5 5.0 2.8 1.1 165 chr2R 17679583 intron Sema-1b - chr2R 17679666 intron Sema-1b - chr2R 17679748 intron Sema-1b - chr2R_4_17675001 chr2R_17675001 RAL-832 673 chr2R 17772488 17772505 chr2R 17772616 17772622 6 133 1.0 5.5 3.2 1.4 134 chr2R 17772488 exon CG6362 - chr2R 17772555 intergenic CG6362 - chr2R 17772622 intergenic CG6362 - chr2R_6_17770001 chr2R_17770001 RAL-832 674 chr2R 17782356 17782386 chr2R 17783573 17783609 pogo 14 1221 4.5 5.0 4.8 2.4 1253 chr2R 17782356 intergenic CG33981 -,fab1 - chr2R 17782982 intergenic not near genes chr2R 17783609 intergenic mir-31a - chr2R_14_17780001 chr2R_17780001 RAL-832 675 chr2R 17784021 17784056 chr2R 17784269 17784317 pogo 6 247 1.5 1.5 1.5 2.4 296 chr2R 17784021 intergenic mir-31a - chr2R 17784169 intergenic mir-31a - chr2R 17784317 intergenic mir-31a - chr2R_6_17780001 chr2R_17780001 RAL-832 676 chr2R 17821714 17821739 chr2R 17821817 17821842 6 100 5.5 4.0 4.8 1.0 128 chr2R 17821714 intron grh + chr2R 17821778 intron grh + chr2R 17821842 intron grh + chr2R_6_17820001 chr2R_17820001 RAL-832 677 chr2R 17852912 17852955 chr2R 17853021 17853066 11 105 3.5 7.5 5.5 1.7 154 chr2R 17852912 intron olf186-F + chr2R 17852989 intron olf186-F + chr2R 17853066 intron olf186-F + chr2R_11_17850001 chr2R_17850001 RAL-832 678 chr2R 17961435 17961480 chr2R 17961742 17961788 10 301 2.0 1.5 1.8 3.6 353 chr2R 17961435 intergenic not near genes chr2R 17961612 intergenic not near genes chr2R 17961788 intergenic not near genes chr2R_10_17960001 chr2R_17960001 RAL-832 679 chr2R 17982908 17982948 chr2R 17983013 17983038 6 98 4.5 2.0 3.2 1.4 130 chr2R 17982908 intron dpr13 - chr2R 17982973 intron dpr13 - chr2R 17983038 intron dpr13 - chr2R_6_17980001 chr2R_17980001 RAL-832 680 chr2R 17995152 17995169 chr2R 17995268 17995302 7 133 4.5 4.0 4.2 1.3 150 chr2R 17995152 intron dpr13 - chr2R 17995227 intron dpr13 - chr2R 17995302 intron dpr13 - chr2R_7_17995001 chr2R_17995001 RAL-832 681 chr2R 18045653 18045701 chr2R 18046025 18046073 jockey 13 370 1.0 5.5 3.2 3.1 420 chr2R 18045653 intergenic not near genes chr2R 18045863 intergenic not near genes chr2R 18046073 intergenic CG5767 - chr2R_13_18045001 chr2R_18045001 RAL-832 682 chr2R 18168379 18168429 chr2R 18168503 18168559 19 126 3.5 4.5 4.0 3.8 180 chr2R 18168379 3` UTR,3` UTR CG42518 +,MED9 + chr2R 18168469 intergenic CG42518 +,MED9 +,Dgp-1 - chr2R 18168559 intergenic CG42518 +,MED9 +,Dgp-1 - chr2R_19_18165001 chr2R_18165001 RAL-832 683 chr2R 18204121 18204151 chr2R 18204226 18204256 5 105 4.0 0.0 2.0 1.7 135 chr2R 18204121 intergenic not near genes chr2R 18204188 intergenic not near genes chr2R 18204256 intergenic not near genes chr2R_5_18200001 chr2R_18200001 RAL-832 684 chr2R 18308289 18308311 chr2R 18308392 18308404 5 113 3.5 1.5 2.5 1.4 115 chr2R 18308289 intron sbb - chr2R 18308346 intron sbb - chr2R 18308404 intron sbb - chr2R_5_18305001 chr2R_18305001 RAL-832 685 chr2R 18358392 18358411 chr2R 18372609 18372627 roo 8 14221 5.5 4.5 5.0 1.3 14235 chr2R 18358392 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372627 intergenic not near genes chr2R_8_18365001 chr2R_18365001 RAL-832 686 chr2R 18398155 18398188 chr2R 18398255 18398279 11 106 2.0 1.5 1.8 3.9 124 chr2R 18398155 intron GstE10 - chr2R 18398217 intron GstE10 - chr2R 18398279 intron GstE10 - chr2R_11_18395001 chr2R_18395001 RAL-832 687 chr2R 18408279 18408313 chr2R 18408405 18408439 10 127 3.5 2.0 2.8 2.6 160 chr2R 18408279 exon GstE8 + chr2R 18408359 exon GstE8 + chr2R 18408439 exon GstE8 + chr2R_10_18405001 chr2R_18405001 RAL-832 688 chr2R 18471922 18471930 chr2R 18472018 18472026 4 96 0.5 1.5 1.0 2.0 104 chr2R 18471922 intron CG30116 - chr2R 18471974 intron CG30116 - chr2R 18472026 intron CG30116 - chr2R_4_18470001 chr2R_18470001 RAL-832 689 chr2R 18526899 18526937 chr2R 18526998 18527048 5 103 1.0 0.0 0.5 3.3 149 chr2R 18526899 intergenic CG43066 + chr2R 18526974 intergenic CG10924 + chr2R 18527048 intergenic CG10924 + chr2R_5_18525001 chr2R_18525001 RAL-832 690 chr2R 18590852 18590895 chr2R 18600018 18600042 roo 4 9155 1.5 0.0 0.8 2.2 9190 chr2R 18590852 intron GEFmeso - chr2R 18595447 intron GEFmeso - chr2R 18600042 intron GEFmeso - chr2R_4_18595001 chr2R_18595001 RAL-832 691 chr2R 18657497 18657534 chr2R 18659917 18659948 12 2408 36.0 6.0 21.0 0.5 2451 chr2R 18657497 intron SP2637 - chr2R 18658722 3` UTR,exon CG42306 -,Gint3 - chr2R 18659948 intron,intron CG42306 -,Gint3 - chr2R_12_18655001 chr2R_18655001 RAL-832 692 chr2R 18678522 18678540 chr2R 18678645 18678659 4 124 3.0 0.5 1.8 1.4 137 chr2R 18678522 intergenic CG44434 -,CG44435 - chr2R 18678590 intergenic CG44434 -,CG44435 - chr2R 18678659 intergenic CG44434 -,CG44435 - chr2R_4_18675001 chr2R_18675001 RAL-832 693 chr2R 18692896 18692914 chr2R 18692988 18693000 5 98 2.5 3.0 2.8 1.3 104 chr2R 18692896 intron Sik3 + chr2R 18692948 intron Sik3 + chr2R 18693000 intron Sik3 + chr2R_5_18690001 chr2R_18690001 RAL-832 694 chr2R 18713236 18713265 chr2R 18713313 18713362 12 90 3.5 2.0 2.8 3.2 126 chr2R 18713236 intergenic not near genes chr2R 18713299 intergenic not near genes chr2R 18713362 intergenic not near genes chr2R_12_18710001 chr2R_18710001 RAL-832 695 chr2R 18726881 18727092 chr2R 18726974 18727248 6 116 4.5 5.0 4.8 1.0 367 chr2R 18726881 intron Hs3st-A + chr2R 18727064 intron Hs3st-A + chr2R 18727248 intron Hs3st-A + chr2R_6_18725001 chr2R_18725001 RAL-832 696 chr2R 18738194 18738209 chr2R 18738290 18738305 6 96 2.5 6.5 4.5 1.1 111 chr2R 18738194 intron Hs3st-A + chr2R 18738250 intron Hs3st-A + chr2R 18738305 intron Hs3st-A + chr2R_6_18735001 chr2R_18735001 RAL-832 697 chr2R 18738213 18738234 chr2R 18738288 18738330 7 86 2.5 6.5 4.5 1.3 117 chr2R 18738213 intron Hs3st-A + chr2R 18738272 intron Hs3st-A + chr2R 18738330 intron Hs3st-A + chr2R_7_18735001 chr2R_18735001 RAL-832 698 chr2R 18808060 18808071 chr2R 18808156 18808180 4 102 0.5 3.0 1.8 1.4 120 chr2R 18808060 intergenic CG15096 - chr2R 18808120 intergenic CG15096 - chr2R 18808180 intergenic CG15096 - chr2R_4_18805001 chr2R_18805001 RAL-832 699 chr2R 18924268 18924271 chr2R 18924363 18924371 4 99 4.5 2.0 3.2 1.0 103 chr2R 18924268 intron sano + chr2R 18924320 intron sano + chr2R 18924371 intron sano + chr2R_4_18920001 chr2R_18920001 RAL-832 700 chr2R 18924280 18924301 chr2R 18924357 18924365 7 86 2.5 1.5 2.0 2.3 85 chr2R 18924280 intron sano + chr2R 18924322 intron sano + chr2R 18924365 intron sano + chr2R_7_18920001 chr2R_18920001 RAL-832 701 chr2R 18926485 18926530 chr2R 18926592 18926637 16 102 3.0 1.5 2.2 5.0 152 chr2R 18926485 intron sano + chr2R 18926561 intron sano + chr2R 18926637 intron sano + chr2R_16_18925001 chr2R_18925001 RAL-832 702 chr2R 18932913 18932935 chr2R 18933021 18933027 6 102 1.0 1.5 1.2 2.7 114 chr2R 18932913 intron sano + chr2R 18932970 intron sano + chr2R 18933027 intron sano + chr2R_6_18930001 chr2R_18930001 RAL-832 703 chr2R 18936918 18936968 chr2R 18937070 18937120 19 148 1.5 2.0 1.8 6.8 202 chr2R 18936918 intron sano + chr2R 18937019 intron sano + chr2R 18937120 intron sano + chr2R_19_18935001 chr2R_18935001 RAL-832 704 chr2R 18953151 18953192 chr2R 18953248 18953279 14 98 2.5 6.0 4.2 2.7 128 chr2R 18953151 intron sano + chr2R 18953215 intron sano + chr2R 18953279 intron sano + chr2R_14_18950001 chr2R_18950001 RAL-832 705 chr2R 18964905 18964949 chr2R 18965001 18965029 13 92 7.5 5.0 6.2 1.8 124 chr2R 18964905 intergenic not near genes chr2R 18964967 intergenic not near genes chr2R 18965029 intergenic not near genes chr2R_13_18960001 chr2R_18960001 RAL-832 706 chr2R 18989007 18989042 chr2R 18989105 18989140 14 94 1.5 1.5 1.5 5.6 133 chr2R 18989007 intron tn + chr2R 18989074 intron tn + chr2R 18989140 intron tn + chr2R_14_18985001 chr2R_18985001 RAL-832 707 chr2R 19067704 19067753 chr2R 19067800 19067849 13 95 4.0 0.5 2.2 4.1 145 chr2R 19067704 intron 5-HT1A + chr2R 19067776 intron 5-HT1A + chr2R 19067849 intron 5-HT1A + chr2R_13_19065001 chr2R_19065001 RAL-832 708 chr2R 19253075 19253122 chr2R 19253185 19253232 14 104 3.5 6.5 5.0 2.3 157 chr2R 19253075 intron CG33453 - chr2R 19253154 exon CG33453 - chr2R 19253232 intergenic CG33453 - chr2R_14_19250001 chr2R_19250001 RAL-832 709 chr2R 19283810 19283817 chr2R 19286770 19286793 4 2965 9.0 0.5 4.8 0.7 2983 chr2R 19283810 5` UTR CG11906 - chr2R 19285302 intergenic CG10476 -,CG10474 - chr2R 19286793 intergenic CG10474 - chr2R_4_19285001 chr2R_19285001 RAL-832 710 chr2R 19300947 19300988 chr2R 19301043 19301072 10 93 2.5 2.5 2.5 2.9 125 chr2R 19300947 intron Tab2 + chr2R 19301010 intron Tab2 + chr2R 19301072 intron Tab2 + chr2R_10_19300001 chr2R_19300001 RAL-832 711 chr2R 19536448 19536499 chr2R 19536550 19536601 15 94 4.0 4.0 4.0 3.0 153 chr2R 19536448 intron sm - chr2R 19536524 intron sm - chr2R 19536601 intron sm - chr2R_15_19535001 chr2R_19535001 RAL-832 712 chr2R 19575552 19575565 chr2R 19575650 19575662 8 98 9.0 4.0 6.5 1.1 110 chr2R 19575552 intron sm - chr2R 19575607 intron sm - chr2R 19575662 intron sm - chr2R_8_19575001 chr2R_19575001 RAL-832 713 chr2R 19575566 19575578 chr2R 19575646 19575676 6 94 3.5 3.0 3.2 1.4 110 chr2R 19575566 intron sm - chr2R 19575621 intron sm - chr2R 19575676 intron sm - chr2R_6_19575001 chr2R_19575001 RAL-832 714 chr2R 19603956 19603969 chr2R 19604065 19604078 4 109 3.0 6.0 4.5 0.7 122 chr2R 19603956 intron sm - chr2R 19604017 intron sm - chr2R 19604078 intron sm - chr2R_4_19600001 chr2R_19600001 RAL-832 715 chr2R 19776587 19776619 chr2R 19779921 19779945 jockey 11 3334 4.5 7.0 5.8 1.6 3358 chr2R 19776587 intergenic not near genes chr2R 19778266 intergenic not near genes chr2R 19779945 intergenic not near genes chr2R_11_19775001 chr2R_19775001 RAL-832 716 chr2R 19807659 19807703 chr2R 19807756 19807805 14 94 3.5 5.5 4.5 2.5 146 chr2R 19807659 intergenic not near genes chr2R 19807732 intergenic not near genes chr2R 19807805 intergenic not near genes chr2R_14_19805001 chr2R_19805001 RAL-832 717 chr2R 19914838 19914864 chr2R 19922260 19922284 mdg1 5 7420 7.0 2.0 4.5 0.9 7446 chr2R 19914838 intergenic not near genes chr2R 19918561 intergenic not near genes chr2R 19922284 intergenic not near genes chr2R_5_19915001 chr2R_19915001 RAL-832 718 chr2R 20057189 20057204 chr2R 20057307 20057322 4 118 7.0 3.0 5.0 0.7 133 chr2R 20057189 intergenic not near genes chr2R 20057256 intergenic not near genes chr2R 20057322 intergenic not near genes chr2R_4_20055001 chr2R_20055001 RAL-832 719 chr2R 20060723 20060743 chr2R 20061077 20061099 6 358 4.0 1.0 2.5 1.7 376 chr2R 20060723 intergenic not near genes chr2R 20060911 intergenic not near genes chr2R 20061099 intergenic not near genes chr2R_6_20060001 chr2R_20060001 RAL-832 720 chr2R 20080607 20080622 chr2R 20080681 20080709 7 81 0.0 6.0 3.0 1.8 102 chr2R 20080607 intergenic not near genes chr2R 20080658 intergenic not near genes chr2R 20080709 intergenic not near genes chr2R_7_20080001 chr2R_20080001 RAL-832 721 chr2R 20125714 20125749 chr2R 20125810 20125845 12 94 3.5 7.5 5.5 1.8 131 chr2R 20125714 intergenic not near genes chr2R 20125780 intergenic not near genes chr2R 20125845 intergenic not near genes chr2R_12_20125001 chr2R_20125001 RAL-832 722 chr2R 20223965 20223982 chr2R 20224033 20224058 4 87 2.5 4.0 3.2 1.0 93 chr2R 20223965 intergenic not near genes chr2R 20224012 intergenic not near genes chr2R 20224058 intergenic not near genes chr2R_4_20220001 chr2R_20220001 RAL-832 723 chr2R 20382316 20382341 chr2R 20382420 20382432 4 97 3.0 0.5 1.8 1.4 116 chr2R 20382316 intergenic not near genes chr2R 20382374 intergenic not near genes chr2R 20382432 intergenic not near genes chr2R_4_20380001 chr2R_20380001 RAL-832 724 chr2R 20577074 20577090 chr2R 20577177 20577193 4 103 1.5 1.5 1.5 1.6 119 chr2R 20577074 intron qsm - chr2R 20577134 intron qsm - chr2R 20577193 intron qsm - chr2R_4_20575001 chr2R_20575001 RAL-832 725 chr2R 20577091 20577119 chr2R 20577174 20577208 6 97 0.0 1.0 0.5 4.0 117 chr2R 20577091 intron qsm - chr2R 20577150 intron qsm - chr2R 20577208 intron qsm - chr2R_6_20575001 chr2R_20575001 RAL-832 726 chr2R 20578630 20578684 chr2R 20578739 20578778 6 102 0.0 2.0 1.0 3.0 148 chr2R 20578630 intron qsm - chr2R 20578704 intron qsm - chr2R 20578778 intron qsm - chr2R_6_20575001 chr2R_20575001 RAL-832 727 chr2R 20601724 20601744 chr2R 20601829 20601849 7 102 1.5 7.0 4.2 1.3 125 chr2R 20601724 intron bl + chr2R 20601786 intron bl + chr2R 20601849 intron bl + chr2R_7_20600001 chr2R_20600001 RAL-832 728 chr2R 20674492 20674528 chr2R 20674858 20674878 4 353 3.5 2.5 3.0 1.0 386 chr2R 20674492 intergenic not near genes chr2R 20674685 intergenic not near genes chr2R 20674878 intergenic not near genes chr2R_4_20670001 chr2R_20670001 RAL-832 729 chr2R 20783291 20783331 chr2R 20788083 20788092 F-element 10 4784 2.0 3.5 2.8 2.6 4801 chr2R 20783291 intergenic not near genes chr2R 20785692 intergenic not near genes chr2R 20788092 intergenic CG43666 - chr2R_10_20785001 chr2R_20785001 RAL-832 730 chr2R 20962893 20962939 chr2R 20963011 20963057 10 115 1.0 5.5 3.2 2.4 164 chr2R 20962893 intergenic not near genes chr2R 20962975 intergenic not near genes chr2R 20963057 intergenic not near genes chr2R_10_20960001 chr2R_20960001 RAL-832 731 chr2R 20983901 20983942 chr2R 20983999 20984046 11 101 5.5 5.0 5.2 1.8 145 chr2R 20983901 3` UTR,3` UTR CG9313 +,CG15651 - chr2R 20983974 3` UTR,3` UTR CG9313 +,CG15651 - chr2R 20984046 3` UTR CG15651 - chr2R_11_20980001 chr2R_20980001 RAL-832 732 chr2R 21060622 21060671 chr2R 21060724 21060758 14 96 4.0 4.0 4.0 2.8 136 chr2R 21060622 intergenic CG15653 -,mRpL54 + chr2R 21060690 intergenic mRpL54 +,CG15653 - chr2R 21060758 intergenic mRpL54 +,CG15653 - chr2R_14_21060001 chr2R_21060001 RAL-832 733 chr2R 21091430 21091473 chr2R 21091533 21091560 17 99 4.5 2.5 3.5 3.8 130 chr2R 21091430 intergenic Rbpn-5 - chr2R 21091495 intergenic Rbpn-5 - chr2R 21091560 intergenic not near genes chr2R_17_21090001 chr2R_21090001 RAL-832 734 chr2R 21151100 21151145 chr2R 21153753 21153798 opus 14 2647 4.0 5.5 4.8 2.4 2698 chr2R 21151100 intron CG30389 - chr2R 21152449 intron CG30389 - chr2R 21153798 intron CG30389 - chr2R_14_21150001 chr2R_21150001 RAL-832 735 chr2R 21188212 21188248 chr2R 21188313 21188349 8 98 5.0 3.5 4.2 1.5 137 chr2R 21188212 exon tud + chr2R 21188280 intron tud + chr2R 21188349 intron tud + chr2R_8_21185001 chr2R_21185001 RAL-832 736 chr2R 21505746 21505769 chr2R 21505847 21505867 15 97 8.0 3.5 5.8 2.2 121 chr2R 21505746 intron MESK2 + chr2R 21505806 intron MESK2 + chr2R 21505867 intron MESK2 + chr2R_15_21505001 chr2R_21505001 RAL-832 737 chr2R 21505771 21505779 chr2R 21505846 21505879 4 93 5.0 3.0 4.0 0.8 108 chr2R 21505771 intron MESK2 + chr2R 21505825 intron MESK2 + chr2R 21505879 intron MESK2 + chr2R_4_21505001 chr2R_21505001 RAL-832 738 chr2R 21546027 21546056 chr2R 21546117 21546140 5 87 5.0 4.0 4.5 0.9 113 chr2R 21546027 intron Egfr + chr2R 21546084 intron Egfr + chr2R 21546140 intron Egfr + chr2R_5_21545001 chr2R_21545001 RAL-832 739 chr2R 21666433 21666482 chr2R 21666535 21666584 16 91 7.5 5.5 6.5 2.1 151 chr2R 21666433 exon CG42364 + chr2R 21666508 exon CG42364 + chr2R 21666584 intergenic CG42364 +,CG42365 +,CG42362 +,CG42363 + chr2R_16_21665001 chr2R_21665001 RAL-832 740 chr2R 21738260 21738307 chr2R 21747440 21747448 roo 7 9166 0.5 1.0 0.8 3.9 9188 chr2R 21738260 intergenic not near genes chr2R 21742854 intergenic not near genes chr2R 21747448 intergenic not near genes chr2R_7_21740001 chr2R_21740001 RAL-832 741 chr2R 21753072 21753097 chr2R 21753571 21753596 roo 9 497 2.0 5.0 3.5 2.0 524 chr2R 21753072 intergenic not near genes chr2R 21753334 intergenic not near genes chr2R 21753596 intergenic not near genes chr2R_9_21750001 chr2R_21750001 RAL-832 742 chr2R 21759560 21759592 chr2R 21759648 21759683 6 93 2.5 2.5 2.5 1.7 123 chr2R 21759560 intergenic not near genes chr2R 21759622 intergenic not near genes chr2R 21759683 intergenic not near genes chr2R_6_21755001 chr2R_21755001 RAL-832 743 chr2R 21830201 21830236 chr2R 21830300 21830320 7 97 4.5 4.5 4.5 1.3 119 chr2R 21830201 intron CG13492 - chr2R 21830260 intron CG13492 - chr2R 21830320 intron CG13492 - chr2R_7_21830001 chr2R_21830001 RAL-832 744 chr2R 21886130 21886160 chr2R 21886218 21886239 9 89 4.5 0.0 2.2 2.8 109 chr2R 21886130 intron Fili + chr2R 21886184 intron Fili + chr2R 21886239 intron Fili + chr2R_9_21885001 chr2R_21885001 RAL-832 745 chr2R 21906257 21906299 chr2R 21906377 21906420 9 116 1.0 2.0 1.5 3.6 163 chr2R 21906257 intron Fili + chr2R 21906338 intron Fili + chr2R 21906420 intron Fili + chr2R_9_21905001 chr2R_21905001 RAL-832 746 chr2R 21985520 21985559 chr2R 21985621 21985660 7 94 3.5 1.0 2.2 2.2 140 chr2R 21985520 intergenic CG30401 - chr2R 21985590 intergenic CG30401 - chr2R 21985660 3` UTR CG30401 - chr2R_7_21985001 chr2R_21985001 RAL-832 747 chr2R 22003078 22003116 chr2R 22003182 22003204 5 101 1.0 5.5 3.2 1.2 126 chr2R 22003078 intron CG34370 - chr2R 22003141 intron CG34370 - chr2R 22003204 intron CG34370 - chr2R_5_22000001 chr2R_22000001 RAL-832 748 chr2R 22012971 22013005 chr2R 22013084 22013118 12 109 4.5 0.0 2.2 3.8 147 chr2R 22012971 intron CG34370 - chr2R 22013044 intron CG34370 - chr2R 22013118 intron CG34370 - chr2R_12_22010001 chr2R_22010001 RAL-832 749 chr2R 22072689 22072710 chr2R 22072779 22072805 5 98 5.5 2.5 4.0 1.0 116 chr2R 22072689 intron CG11474 - chr2R 22072747 intron CG11474 - chr2R 22072805 exon CG11474 - chr2R_5_22070001 chr2R_22070001 RAL-832 750 chr2R 22247537 22247552 chr2R 22247630 22247650 5 97 2.5 1.5 2.0 1.7 113 chr2R 22247537 intron dve + chr2R 22247594 intron dve + chr2R 22247650 intron dve + chr2R_5_22245001 chr2R_22245001 RAL-832 751 chr2R 22360375 22360395 chr2R 22360828 22360830 jockey 4 448 5.5 1.5 3.5 0.9 455 chr2R 22360375 intron Liprin-gamma - chr2R 22360602 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-832 752 chr2R 22370768 22370781 chr2R 22370865 22370878 4 97 1.0 5.5 3.2 1.0 110 chr2R 22370768 intron Liprin-gamma - chr2R 22370823 intron Liprin-gamma - chr2R 22370878 intron Liprin-gamma - chr2R_4_22370001 chr2R_22370001 RAL-832 753 chr2R 22506703 22506726 chr2R 22506794 22506814 8 92 4.5 2.0 3.2 1.9 111 chr2R 22506703 intron px - chr2R 22506758 intron px - chr2R 22506814 intron px - chr2R_8_22505001 chr2R_22505001 RAL-832 754 chr2R 22580433 22580445 chr2R 22586600 22586614 diver 5 6169 0.5 1.0 0.8 2.8 6181 chr2R 22580433 intron dnr1 - chr2R 22583524 intron dnr1 - chr2R 22586614 intron dnr1 - chr2R_5_22580001 chr2R_22580001 RAL-832 755 chr2R 22774966 22774977 chr2R 22775386 22775402 jockey 5 427 7.5 5.0 6.2 0.7 436 chr2R 22774966 intron CG42260 - chr2R 22775184 intron CG42260 - chr2R 22775402 intron CG42260 - chr2R_5_22775001 chr2R_22775001 RAL-832 756 chr2R 22774980 22774996 chr2R 22775378 22775435 jockey 6 427 4.0 4.5 4.2 1.2 455 chr2R 22774980 intron CG42260 - chr2R 22775208 intron CG42260 - chr2R 22775435 intron CG42260 - chr2R_6_22775001 chr2R_22775001 RAL-832 757 chr2R 22941804 22941816 chr2R 22941903 22941915 4 99 0.0 8.0 4.0 0.8 111 chr2R 22941804 intergenic CG42694 + chr2R 22941860 intergenic CG42694 + chr2R 22941915 5` UTR CG42694 + chr2R_4_22940001 chr2R_22940001 RAL-832 758 chr2R 22941819 22941850 chr2R 22941902 22941949 8 92 1.0 8.0 4.5 1.5 130 chr2R 22941819 intergenic CG42694 + chr2R 22941884 5` UTR CG42694 + chr2R 22941949 5` UTR CG42694 + chr2R_8_22940001 chr2R_22940001 RAL-832 759 chr2R 23000144 23000169 chr2R 23000218 23000269 9 79 6.0 5.5 5.8 1.3 125 chr2R 23000144 intron twi + chr2R 23000206 intron twi + chr2R 23000269 intron twi + chr2R_9_23000001 chr2R_23000001 RAL-832 760 chr2R 23070404 23070444 chr2R 23070505 23070545 11 103 0.5 2.0 1.2 5.0 141 chr2R 23070404 intron l(2)k09913 + chr2R 23070474 intron l(2)k09913 + chr2R 23070545 intron l(2)k09913 + chr2R_11_23070001 chr2R_23070001 RAL-832 761 chr2R 23155721 23155878 chr2R 23155803 23155963 15 98 0.5 2.5 1.5 6.0 242 chr2R 23155721 intron CG9899 + chr2R 23155842 intron CG9899 + chr2R 23155963 intron CG9899 + chr2R_15_23155001 chr2R_23155001 RAL-832 762 chr2R 23180373 23180417 chr2R 23180653 23180697 13 275 4.5 1.5 3.0 3.2 324 chr2R 23180373 intron CG34371 - chr2R 23180535 intron CG34371 - chr2R 23180697 intron CG34371 - chr2R_13_23180001 chr2R_23180001 RAL-832 763 chr2R 23219003 23219016 chr2R 23219256 23219260 4 250 3.0 0.0 1.5 1.6 257 chr2R 23219003 intergenic not near genes chr2R 23219132 intergenic not near genes chr2R 23219260 intergenic not near genes chr2R_4_23215001 chr2R_23215001 RAL-832 764 chr2R 23402589 23402607 chr2R 23407685 23407703 flea 9 5095 11.5 9.0 10.2 0.8 5114 chr2R 23402589 intergenic CG3520 - chr2R 23405146 intergenic not near genes chr2R 23407703 intergenic not near genes chr2R_9_23405001 chr2R_23405001 RAL-832 765 chr2R 23402608 23402642 chr2R 23407683 23407721 flea 6 5084 5.5 8.0 6.8 0.8 5113 chr2R 23402608 intergenic CG3520 - chr2R 23405164 intergenic not near genes chr2R 23407721 intergenic not near genes chr2R_6_23405001 chr2R_23405001 RAL-832 766 chr2R 23475608 23475655 chr2R 23475727 23475749 5 114 1.5 0.5 1.0 2.5 141 chr2R 23475608 intron CG43795 + chr2R 23475678 intron CG43795 + chr2R 23475749 intron,3` UTR CG43795 +,CG13557 - chr2R_5_23475001 chr2R_23475001 RAL-832 767 chr2R 23570399 23570437 chr2R 23570479 23570527 14 87 2.5 1.0 1.8 5.0 128 chr2R 23570399 intron apt + chr2R 23570463 intron apt + chr2R 23570527 intron apt + chr2R_14_23570001 chr2R_23570001 RAL-832 768 chr2R 23594818 23594869 chr2R 23595055 23595066 11 227 3.5 2.5 3.0 2.8 248 chr2R 23594818 intron apt + chr2R 23594942 intron apt + chr2R 23595066 intron apt + chr2R_11_23590001 chr2R_23590001 RAL-832 769 chr2R 23607021 23607189 chr2R 23607122 23607291 14 97 2.5 2.5 2.5 4.0 270 chr2R 23607021 intron CG17664 - chr2R 23607156 intron CG17664 - chr2R 23607291 intron CG17664 - chr2R_14_23605001 chr2R_23605001 RAL-832 770 chr2R 24031372 24031388 chr2R 24031469 24031492 6 100 7.0 7.5 7.2 0.7 120 chr2R 24031372 5` UTR CG30172 - chr2R 24031432 intergenic CG30172 -,Chi - chr2R 24031492 intergenic Chi -,CG30172 - chr2R_6_24030001 chr2R_24030001 RAL-832 771 chr2R 24031391 24031404 chr2R 24031465 24031504 6 90 5.5 7.0 6.2 0.8 113 chr2R 24031391 5` UTR CG30172 - chr2R 24031448 intergenic CG30172 -,Chi - chr2R 24031504 intergenic Chi -,CG30172 - chr2R_6_24030001 chr2R_24030001 RAL-832 772 chr2R 24031405 24031410 chr2R 24031464 24031514 5 93 4.5 6.0 5.2 0.8 109 chr2R 24031405 5` UTR CG30172 - chr2R 24031460 intergenic CG30172 -,Chi - chr2R 24031514 intergenic Chi -,CG30172 - chr2R_5_24030001 chr2R_24030001 RAL-832 773 chr2R 24077970 24078008 chr2R 24078120 24078156 5 143 2.5 3.0 2.8 1.3 186 chr2R 24077970 3` UTR Mlp60A + chr2R 24078063 3` UTR Mlp60A + chr2R 24078156 3` UTR Mlp60A + chr2R_5_24075001 chr2R_24075001 RAL-832 774 chr2R 24177215 24177262 chr2R 24184720 24184736 412 14 7497 9.0 4.0 6.5 1.9 7521 chr2R 24177215 3` UTR Nop60B + chr2R 24180976 intron Nop60B + chr2R 24184736 3` UTR Nop60B + chr2R_14_24180001 chr2R_24180001 RAL-832 775 chr2R 24353417 24353461 chr2R 24361788 24361798 roo 6 8366 2.0 3.5 2.8 1.6 8381 chr2R 24353417 intron,intron bs +,CR44811 - chr2R 24357608 intron,intron bs +,CR44811 - chr2R 24361798 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-832 776 chr2R 24493072 24493088 chr2R 24493181 24493197 6 109 4.5 6.5 5.5 0.9 125 chr2R 24493072 intergenic CG13590 -,CG13589 - chr2R 24493134 intergenic CG13590 -,CG13589 - chr2R 24493197 intergenic CG13590 -,CG13589 - chr2R_6_24490001 chr2R_24490001 RAL-832 777 chr2R 24727890 24727914 chr2R 24735408 24735432 mdg1 5 7512 0.5 2.0 1.2 2.3 7542 chr2R 24727890 intron Mid1 - chr2R 24731661 intron Mid1 - chr2R 24735432 intron Mid1 - chr2R_5_24730001 chr2R_24730001 RAL-832 778 chr2R 24884036 24884072 chr2R 24884135 24884164 12 94 5.5 4.5 5.0 2.0 128 chr2R 24884036 intron NKAIN + chr2R 24884100 intron NKAIN + chr2R 24884164 intron NKAIN + chr2R_12_24880001 chr2R_24880001 RAL-832 779 chr2R 25022622 25022644 chr2R 25022726 25022743 9 101 5.5 3.5 4.5 1.6 121 chr2R 25022622 intron uzip + chr2R 25022682 intron uzip + chr2R 25022743 intron uzip + chr2R_9_25020001 chr2R_25020001 RAL-832 780 chr2R 25022646 25022672 chr2R 25022725 25022773 5 95 1.5 3.5 2.5 1.4 127 chr2R 25022646 intron uzip + chr2R 25022710 intron uzip + chr2R 25022773 intron uzip + chr2R_5_25020001 chr2R_25020001 RAL-832 781 chr2R 25097862 25097885 chr2R 25097980 25097988 6 115 1.0 8.5 4.8 1.0 126 chr2R 25097862 intron lov - chr2R 25097925 intron lov - chr2R 25097988 intron lov - chr2R_6_25095001 chr2R_25095001 RAL-832 782 chr2R 25141675 25141684 chr2R 25159345 25159374 roo 5 17697 5.0 4.5 4.8 0.9 17699 chr2R 25141675 intergenic not near genes chr2R 25150524 intergenic not near genes chr2R 25159374 intergenic not near genes chr2R_5_25150001 chr2R_25150001 RAL-832 783 chr2R 25193328 25193367 chr2R 25193490 25193530 5 163 3.0 3.0 3.0 1.2 202 chr2R 25193328 intron CG9380 - chr2R 25193429 intron CG9380 - chr2R 25193530 intron CG9380 - chr2R_5_25190001 chr2R_25190001 RAL-832 784 chr2R 25234744 25234796 chr2R 25234844 25234878 8 92 2.0 1.0 1.5 3.2 134 chr2R 25234744 intron CG9380 - chr2R 25234811 intron CG9380 - chr2R 25234878 intron CG9380 - chr2R_8_25230001 chr2R_25230001 RAL-832 785 chr2R 25253445 25253478 chr2R 25253525 25253533 5 78 4.0 3.5 3.8 1.0 88 chr2R 25253445 intron,intron CG9380 -,CG30428 + chr2R 25253489 intron,intron CG9380 -,CG30428 + chr2R 25253533 intron,intron CG9380 -,CG30428 + chr2R_5_25250001 chr2R_25250001 RAL-832 786 chr3L 106002 106027 chr3L 106131 106176 9 140 4.0 4.5 4.2 1.7 174 chr3L 106002 intergenic not near genes chr3L 106089 intergenic not near genes chr3L 106176 intergenic not near genes chr3L_9_105001 chr3L_105001 RAL-832 787 chr3L 107318 107367 chr3L 107426 107444 14 101 5.5 6.0 5.8 2.1 126 chr3L 107318 intergenic not near genes chr3L 107381 intergenic not near genes chr3L 107444 intergenic not near genes chr3L_14_105001 chr3L_105001 RAL-832 788 chr3L 108602 108622 chr3L 108760 108785 4 162 7.5 6.5 7.0 0.5 183 chr3L 108602 intergenic not near genes chr3L 108694 intergenic not near genes chr3L 108785 intergenic not near genes chr3L_4_105001 chr3L_105001 RAL-832 789 chr3L 110191 110245 chr3L 119378 119406 roo 12 9180 5.5 2.5 4.0 2.4 9215 chr3L 110191 intergenic not near genes chr3L 114798 intergenic not near genes chr3L 119406 intergenic not near genes chr3L_12_110001 chr3L_110001 RAL-832 790 chr3L 365505 365557 chr3L 365611 365658 22 100 3.0 5.0 4.0 4.4 153 chr3L 365505 3` UTR CG1233 + chr3L 365582 3` UTR CG1233 + chr3L 365658 3` UTR CG1233 + chr3L_22_365001 chr3L_365001 RAL-832 791 chr3L 402697 402715 chr3L 409743 409787 297 6 7062 0.0 4.5 2.2 1.9 7090 chr3L 402697 intergenic not near genes chr3L 406242 intergenic not near genes chr3L 409787 intergenic not near genes chr3L_6_405001 chr3L_405001 RAL-832 792 chr3L 524763 524776 chr3L 524860 524867 8 100 0.0 7.5 3.8 1.7 104 chr3L 524763 intron klar - chr3L 524815 intron klar - chr3L 524867 intron klar - chr3L_8_520001 chr3L_520001 RAL-832 793 chr3L 642456 642497 chr3L 642558 642607 7 97 7.0 5.0 6.0 1.0 151 chr3L 642456 5` UTR CR43334 + chr3L 642532 5` UTR CR43334 + chr3L 642607 5` UTR CR43334 + chr3L_7_640001 chr3L_640001 RAL-832 794 chr3L 789897 789944 chr3L 790402 790449 roo 14 502 3.0 5.0 4.0 2.8 552 chr3L 789897 intergenic not near genes chr3L 790173 intergenic not near genes chr3L 790449 intergenic not near genes chr3L_14_790001 chr3L_790001 RAL-832 795 chr3L 925160 925208 chr3L 932606 932640 mdg1 15 7434 1.5 4.0 2.8 3.9 7480 chr3L 925160 intron Glut1 + chr3L 928900 intron Glut1 + chr3L 932640 intron Glut1 + chr3L_15_925001 chr3L_925001 RAL-832 796 chr3L 933922 933939 chr3L 934030 934062 4 116 3.0 8.5 5.8 0.6 140 chr3L 933922 intron Glut1 + chr3L 933992 intron Glut1 + chr3L 934062 intron Glut1 + chr3L_4_930001 chr3L_930001 RAL-832 797 chr3L 939769 939792 chr3L 940893 940933 jockey 7 1130 3.0 8.0 5.5 1.1 1164 chr3L 939769 intron Glut1 + chr3L 940351 intron Glut1 + chr3L 940933 intron Glut1 + chr3L_7_940001 chr3L_940001 RAL-832 798 chr3L 949895 949908 chr3L 949994 950007 5 99 1.5 1.5 1.5 2.0 112 chr3L 949895 intron Glut1 + chr3L 949951 intron Glut1 + chr3L 950007 intron Glut1 + chr3L_5_945001 chr3L_945001 RAL-832 799 chr3L 961024 961044 chr3L 961112 961157 11 107 3.5 5.5 4.5 2.0 133 chr3L 961024 intron Glut1 + chr3L 961090 intron Glut1 + chr3L 961157 intron Glut1 + chr3L_11_960001 chr3L_960001 RAL-832 800 chr3L 1042949 1042963 chr3L 1043047 1043061 8 96 9.5 2.0 5.8 1.2 112 chr3L 1042949 intron bab1 - chr3L 1043005 intron bab1 - chr3L 1043061 intron bab1 - chr3L_8_1040001 chr3L_1040001 RAL-832 801 chr3L 1042969 1042989 chr3L 1043041 1043072 5 90 5.0 2.0 3.5 1.1 103 chr3L 1042969 intron bab1 - chr3L 1043020 intron bab1 - chr3L 1043072 intron bab1 - chr3L_5_1040001 chr3L_1040001 RAL-832 802 chr3L 1175889 1175927 chr3L 1175987 1176030 6 97 2.5 2.5 2.5 1.7 141 chr3L 1175889 intron bab2 - chr3L 1175960 intron bab2 - chr3L 1176030 intron bab2 - chr3L_6_1175001 chr3L_1175001 RAL-832 803 chr3L 1189635 1189658 chr3L 1189736 1189752 8 102 1.0 6.0 3.5 1.8 117 chr3L 1189635 5` UTR CG13912 + chr3L 1189694 5` UTR CG13912 + chr3L 1189752 5` UTR CG13912 + chr3L_8_1185001 chr3L_1185001 RAL-832 804 chr3L 1214218 1214241 chr3L 1214304 1214338 11 93 6.0 7.5 6.8 1.4 120 chr3L 1214218 intron mwh + chr3L 1214278 intron mwh + chr3L 1214338 intron mwh + chr3L_11_1210001 chr3L_1210001 RAL-832 805 chr3L 1372342 1372373 chr3L 1372440 1372464 8 96 2.0 2.0 2.0 2.7 122 chr3L 1372342 intron,intron Ptp61F -,ru + chr3L 1372403 intron,intron Ptp61F -,ru + chr3L 1372464 intron,intron Ptp61F -,ru + chr3L_8_1370001 chr3L_1370001 RAL-832 806 chr3L 1396723 1396753 chr3L 1396826 1396845 7 100 7.0 7.0 7.0 0.9 122 chr3L 1396723 intron Ptp61F - chr3L 1396784 intron Ptp61F - chr3L 1396845 intron Ptp61F - chr3L_7_1395001 chr3L_1395001 RAL-832 807 chr3L 1506004 1506031 chr3L 1513599 1513624 17.6 9 7603 5.0 4.0 4.5 1.6 7620 chr3L 1506004 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513624 intron,intron Psa +,cue - chr3L_9_1505001 chr3L_1505001 RAL-832 808 chr3L 1571450 1571487 chr3L 1571554 1571582 6 99 2.0 3.5 2.8 1.6 132 chr3L 1571450 intron CG12004 + chr3L 1571516 intron CG12004 + chr3L 1571582 intron CG12004 + chr3L_6_1570001 chr3L_1570001 RAL-832 809 chr3L 1584118 1584124 chr3L 1584220 1584224 4 102 0.0 1.0 0.5 2.7 106 chr3L 1584118 intron CG13917 + chr3L 1584171 intron CG13917 + chr3L 1584224 intron CG13917 + chr3L_4_1580001 chr3L_1580001 RAL-832 810 chr3L 1585921 1585928 chr3L 1586022 1586029 4 101 6.5 0.5 3.5 0.9 108 chr3L 1585921 intron CG13917 + chr3L 1585975 intron CG13917 + chr3L 1586029 intron CG13917 + chr3L_4_1585001 chr3L_1585001 RAL-832 811 chr3L 1585930 1585936 chr3L 1586016 1586026 5 93 4.5 0.5 2.5 1.4 96 chr3L 1585930 intron CG13917 + chr3L 1585978 intron CG13917 + chr3L 1586026 intron CG13917 + chr3L_5_1585001 chr3L_1585001 RAL-832 812 chr3L 1610578 1610606 chr3L 1610665 1610701 5 91 2.5 4.0 3.2 1.2 123 chr3L 1610578 intron,intron CG18170 +,CG33791 + chr3L 1610640 intron,intron CG18170 +,CG33791 + chr3L 1610701 intron,intron,3` UTR CG18170 +,CG33791 +,CG12105 - chr3L_5_1610001 chr3L_1610001 RAL-832 813 chr3L 1740863 1740880 chr3L 1741101 1741107 pogo 5 238 6.0 7.0 6.5 0.7 244 chr3L 1740863 intron Gk + chr3L 1740985 intron Gk + chr3L 1741107 intron Gk + chr3L_5_1740001 chr3L_1740001 RAL-832 814 chr3L 1991123 1991151 chr3L 1991196 1991234 7 87 3.5 1.5 2.5 2.0 111 chr3L 1991123 intergenic not near genes chr3L 1991178 intergenic not near genes chr3L 1991234 intergenic not near genes chr3L_7_1990001 chr3L_1990001 RAL-832 815 chr3L 2139186 2139227 chr3L 2139287 2139291 10 95 3.5 1.5 2.5 2.9 105 chr3L 2139186 intron zormin - chr3L 2139238 intron zormin - chr3L 2139291 intron zormin - chr3L_10_2135001 chr3L_2135001 RAL-832 816 chr3L 2278767 2278779 chr3L 2279014 2279043 4 262 1.0 3.0 2.0 1.3 276 chr3L 2278767 intergenic not near genes chr3L 2278905 intergenic not near genes chr3L 2279043 intergenic not near genes chr3L_4_2275001 chr3L_2275001 RAL-832 817 chr3L 2290243 2290272 chr3L 2290340 2290364 4 92 0.0 4.5 2.2 1.2 121 chr3L 2290243 intron MsR2 + chr3L 2290304 intron MsR2 + chr3L 2290364 intron MsR2 + chr3L_4_2290001 chr3L_2290001 RAL-832 818 chr3L 2307991 2308030 chr3L 2308108 2308143 8 114 6.5 1.5 4.0 1.6 152 chr3L 2307991 intergenic not near genes chr3L 2308067 intergenic not near genes chr3L 2308143 intergenic not near genes chr3L_8_2305001 chr3L_2305001 RAL-832 819 chr3L 2401136 2401182 chr3L 2401241 2401287 7 99 4.5 7.0 5.8 1.0 151 chr3L 2401136 intron CG45186 + chr3L 2401212 intron CG45186 + chr3L 2401287 intron CG45186 + chr3L_7_2400001 chr3L_2400001 RAL-832 820 chr3L 2447489 2447527 chr3L 2456665 2456702 roo 6 9170 5.0 1.5 3.2 1.4 9213 chr3L 2447489 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456702 intron CG45186 + chr3L_6_2450001 chr3L_2450001 RAL-832 821 chr3L 2467432 2467486 chr3L 2467549 2467603 5 116 4.5 0.0 2.2 1.6 171 chr3L 2467432 intron CG45186 + chr3L 2467518 intron CG45186 + chr3L 2467603 intron CG45186 + chr3L_5_2465001 chr3L_2465001 RAL-832 822 chr3L 2493838 2493849 chr3L 2493906 2493932 6 95 2.0 0.0 1.0 3.0 94 chr3L 2493838 intron CG45186 + chr3L 2493885 intron CG45186 + chr3L 2493932 intron CG45186 + chr3L_6_2490001 chr3L_2490001 RAL-832 823 chr3L 2498735 2498758 chr3L 2498894 2498930 12 170 2.0 3.0 2.5 3.4 195 chr3L 2498735 3` UTR CG45186 + chr3L 2498832 3` UTR CG45186 + chr3L 2498930 3` UTR CG45186 + chr3L_12_2495001 chr3L_2495001 RAL-832 824 chr3L 2534616 2534636 chr3L 2534713 2534714 4 94 0.0 4.0 2.0 1.3 98 chr3L 2534616 intron Spn - chr3L 2534665 intron Spn - chr3L 2534714 exon Spn - chr3L_4_2530001 chr3L_2530001 RAL-832 825 chr3L 2546745 2546749 chr3L 2546854 2546858 4 109 12.5 1.0 6.8 0.5 113 chr3L 2546745 intron Spn - chr3L 2546802 intron Spn - chr3L 2546858 intron Spn - chr3L_4_2545001 chr3L_2545001 RAL-832 826 chr3L 2546758 2546794 chr3L 2546852 2546893 5 100 4.0 1.0 2.5 1.4 135 chr3L 2546758 intron Spn - chr3L 2546826 intron Spn - chr3L 2546893 intron Spn - chr3L_5_2545001 chr3L_2545001 RAL-832 827 chr3L 2554046 2554088 chr3L 2554144 2554171 7 94 4.5 0.0 2.2 2.2 125 chr3L 2554046 intron Spn - chr3L 2554108 5` UTR Spn - chr3L 2554171 5` UTR Spn - chr3L_7_2550001 chr3L_2550001 RAL-832 828 chr3L 2561512 2561546 chr3L 2561607 2561633 8 92 4.5 2.5 3.5 1.8 121 chr3L 2561512 intron msn - chr3L 2561572 intron msn - chr3L 2561633 intron msn - chr3L_8_2560001 chr3L_2560001 RAL-832 829 chr3L 2674731 2674767 chr3L 2674856 2674875 10 121 2.5 1.5 2.0 3.3 144 chr3L 2674731 intron Fife - chr3L 2674803 intron Fife - chr3L 2674875 intron Fife - chr3L_10_2670001 chr3L_2670001 RAL-832 830 chr3L 2683929 2683975 chr3L 2684025 2684036 18 92 3.5 3.5 3.5 4.0 107 chr3L 2683929 intron Fife - chr3L 2683982 intron Fife - chr3L 2684036 intron Fife - chr3L_18_2680001 chr3L_2680001 RAL-832 831 chr3L 2719535 2719560 chr3L 2719637 2719682 8 110 3.0 3.0 3.0 2.0 147 chr3L 2719535 3` UTR Mrtf - chr3L 2719608 3` UTR Mrtf - chr3L 2719682 3` UTR Mrtf - chr3L_8_2715001 chr3L_2715001 RAL-832 832 chr3L 2770896 2770915 chr3L 2770987 2771000 4 86 0.0 3.0 1.5 1.6 104 chr3L 2770896 intron CG9977 - chr3L 2770948 intron CG9977 - chr3L 2771000 intron CG9977 - chr3L_4_2770001 chr3L_2770001 RAL-832 833 chr3L 2927847 2927865 chr3L 2936121 2936161 Tirant 5 8281 3.5 4.0 3.8 1.0 8314 chr3L 2927847 intron Shab + chr3L 2932004 intron Shab + chr3L 2936161 intron Shab + chr3L_5_2930001 chr3L_2930001 RAL-832 834 chr3L 2966703 2966712 chr3L 2974145 2974157 mdg1 4 7444 4.5 0.0 2.2 1.2 7454 chr3L 2966703 intergenic not near genes chr3L 2970430 intergenic not near genes chr3L 2974157 intergenic not near genes chr3L_4_2970001 chr3L_2970001 RAL-832 835 chr3L 3051728 3051753 chr3L 3051990 3052011 pogo 9 257 9.5 1.5 5.5 1.4 283 chr3L 3051728 3` UTR CG32485 + chr3L 3051870 intergenic CG32485 + chr3L 3052011 intergenic CG32485 + chr3L_9_3050001 chr3L_3050001 RAL-832 836 chr3L 3252324 3252375 chr3L 3252420 3252471 9 93 3.5 0.0 1.8 3.2 147 chr3L 3252324 5` UTR CR43626 + chr3L 3252398 5` UTR CR43626 + chr3L 3252471 5` UTR CR43626 + chr3L_9_3250001 chr3L_3250001 RAL-832 837 chr3L 3259819 3259832 chr3L 3259939 3259952 4 120 2.0 6.0 4.0 0.8 133 chr3L 3259819 intron ckd + chr3L 3259886 intron ckd + chr3L 3259952 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-832 838 chr3L 3281454 3281469 chr3L 3281963 3281979 Doc 5 510 1.0 4.5 2.8 1.3 525 chr3L 3281454 intron CG12017 + chr3L 3281716 intron CG12017 + chr3L 3281979 intron CG12017 + chr3L_5_3280001 chr3L_3280001 RAL-832 839 chr3L 3294115 3294146 chr3L 3294226 3294256 7 111 2.5 4.5 3.5 1.6 141 chr3L 3294115 intron CG12009 + chr3L 3294186 intron CG12009 + chr3L 3294256 intron CG12009 + chr3L_7_3290001 chr3L_3290001 RAL-832 840 chr3L 3310282 3310324 chr3L 3310370 3310418 9 83 2.5 2.5 2.5 2.6 136 chr3L 3310282 intron ZnT63C + chr3L 3310350 intron ZnT63C + chr3L 3310418 intron ZnT63C + chr3L_9_3310001 chr3L_3310001 RAL-832 841 chr3L 3317519 3317566 chr3L 3317618 3317651 11 95 1.5 4.5 3.0 2.8 132 chr3L 3317519 intergenic Drsl5 + chr3L 3317585 intergenic Drsl5 +,PIG-C - chr3L 3317651 intergenic PIG-C - chr3L_11_3315001 chr3L_3315001 RAL-832 842 chr3L 3431923 3431970 chr3L 3432040 3432056 7 109 4.0 1.5 2.8 1.8 133 chr3L 3431923 intron eIF5B - chr3L 3431990 intron eIF5B - chr3L 3432056 intron eIF5B - chr3L_7_3430001 chr3L_3430001 RAL-832 843 chr3L 3436280 3436316 chr3L 3436379 3436415 11 98 3.0 4.0 3.5 2.4 135 chr3L 3436280 intron eIF5B - chr3L 3436348 intron eIF5B - chr3L 3436415 intron eIF5B - chr3L_11_3435001 chr3L_3435001 RAL-832 844 chr3L 3601284 3601331 chr3L 3606615 3606646 copia 7 5323 2.0 4.0 3.0 1.8 5362 chr3L 3601284 intron Eip63E + chr3L 3603965 intron Eip63E + chr3L 3606646 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-832 845 chr3L 3642149 3642188 chr3L 3642263 3642314 12 121 2.0 2.5 2.2 3.8 165 chr3L 3642149 intron dar1 + chr3L 3642232 intron dar1 + chr3L 3642314 intron dar1 + chr3L_12_3640001 chr3L_3640001 RAL-832 846 chr3L 3709441 3709462 chr3L 3709543 3709549 4 97 0.0 1.5 0.8 2.2 108 chr3L 3709441 intergenic CR45675 + chr3L 3709495 intergenic CR45675 + chr3L 3709549 intergenic not near genes chr3L_4_3705001 chr3L_3705001 RAL-832 847 chr3L 3720948 3720974 chr3L 3721050 3721051 8 94 4.0 7.5 5.8 1.2 103 chr3L 3720948 intron CG32264 - chr3L 3721000 intron CG32264 - chr3L 3721051 intron CG32264 - chr3L_8_3720001 chr3L_3720001 RAL-832 848 chr3L 3763740 3763757 chr3L 3763841 3763842 4 94 3.0 1.5 2.2 1.2 102 chr3L 3763740 intron CG32264 - chr3L 3763791 intron CG32264 - chr3L 3763842 intron CG32264 - chr3L_4_3760001 chr3L_3760001 RAL-832 849 chr3L 3766718 3766736 chr3L 3766824 3766842 5 106 4.5 0.0 2.2 1.6 124 chr3L 3766718 intron CG32264 - chr3L 3766780 intron CG32264 - chr3L 3766842 intron CG32264 - chr3L_5_3765001 chr3L_3765001 RAL-832 850 chr3L 3797222 3797258 chr3L 3797325 3797361 13 98 2.0 5.5 3.8 2.7 139 chr3L 3797222 intron CG32264 - chr3L 3797292 intron CG32264 - chr3L 3797361 intron CG32264 - chr3L_13_3795001 chr3L_3795001 RAL-832 851 chr3L 3815034 3815083 chr3L 3815135 3815168 13 97 3.0 3.0 3.0 3.2 134 chr3L 3815034 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815101 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815168 intron,intron Scsalpha +,CR43932 - chr3L_13_3815001 chr3L_3815001 RAL-832 852 chr3L 3833725 3833754 chr3L 3833978 3834015 pogo 5 256 4.5 1.5 3.0 1.2 290 chr3L 3833725 intron enc + chr3L 3833870 intron enc + chr3L 3834015 intron enc + chr3L_5_3830001 chr3L_3830001 RAL-832 853 chr3L 3889113 3889133 chr3L 3889216 3889226 5 99 3.5 0.0 1.8 1.8 113 chr3L 3889113 intergenic not near genes chr3L 3889170 intergenic not near genes chr3L 3889226 intergenic not near genes chr3L_5_3885001 chr3L_3885001 RAL-832 854 chr3L 3926008 3926041 chr3L 3926121 3926154 10 113 1.5 3.5 2.5 2.9 146 chr3L 3926008 intron Eip63F-1 - chr3L 3926081 intron Eip63F-1 - chr3L 3926154 intron Eip63F-1 - chr3L_10_3925001 chr3L_3925001 RAL-832 855 chr3L 4015722 4015757 chr3L 4015825 4015860 8 95 3.5 6.0 4.8 1.4 138 chr3L 4015722 intergenic not near genes chr3L 4015791 intergenic not near genes chr3L 4015860 intergenic not near genes chr3L_8_4015001 chr3L_4015001 RAL-832 856 chr3L 4146804 4146832 chr3L 4146899 4146924 8 98 0.0 4.0 2.0 2.7 120 chr3L 4146804 intergenic not near genes chr3L 4146864 intergenic not near genes chr3L 4146924 intergenic not near genes chr3L_8_4145001 chr3L_4145001 RAL-832 857 chr3L 4214531 4214547 chr3L 4214683 4214704 6 154 4.0 6.0 5.0 1.0 173 chr3L 4214531 intron CG43367 + chr3L 4214618 intron CG43367 + chr3L 4214704 intron CG43367 + chr3L_6_4210001 chr3L_4210001 RAL-832 858 chr3L 4238716 4238745 chr3L 4238836 4238866 7 118 0.0 0.0 0.0 7.0 150 chr3L 4238716 intergenic not near genes chr3L 4238791 intergenic not near genes chr3L 4238866 intergenic not near genes chr3L_7_4235001 chr3L_4235001 RAL-832 859 chr3L 4328738 4328763 chr3L 4336239 4336281 412 4 7511 0.0 4.5 2.2 1.2 7543 chr3L 4328738 intron Cip4 - chr3L 4332510 intron Cip4 - chr3L 4336281 exon Cip4 - chr3L_4_4330001 chr3L_4330001 RAL-832 860 chr3L 4378838 4378871 chr3L 4378936 4378944 7 92 5.0 3.5 4.2 1.3 106 chr3L 4378838 intron DopEcR - chr3L 4378891 intron DopEcR - chr3L 4378944 intron DopEcR - chr3L_7_4375001 chr3L_4375001 RAL-832 861 chr3L 4390019 4390066 chr3L 4390111 4390164 6 96 0.0 4.5 2.2 1.9 145 chr3L 4390019 intron slow + chr3L 4390092 intron slow + chr3L 4390164 intron slow + chr3L_6_4390001 chr3L_4390001 RAL-832 862 chr3L 4440735 4440767 chr3L 4440833 4440868 5 100 1.0 1.5 1.2 2.3 133 chr3L 4440735 intergenic not near genes chr3L 4440802 intergenic not near genes chr3L 4440868 intergenic not near genes chr3L_5_4440001 chr3L_4440001 RAL-832 863 chr3L 4597194 4597243 chr3L 4597296 4597310 5 88 1.5 2.5 2.0 1.7 116 chr3L 4597194 intron Src64B - chr3L 4597252 intron Src64B - chr3L 4597310 intron Src64B - chr3L_5_4595001 chr3L_4595001 RAL-832 864 chr3L 4703786 4703798 chr3L 4703881 4703895 5 103 5.0 0.0 2.5 1.4 109 chr3L 4703786 intron,5` UTR RhoGEF64C +,CR43879 + chr3L 4703840 intron,5` UTR RhoGEF64C +,CR43879 + chr3L 4703895 intron,5` UTR RhoGEF64C +,CR43879 + chr3L_5_4700001 chr3L_4700001 RAL-832 865 chr3L 4839580 4839620 chr3L 4839675 4839695 10 88 5.0 1.0 3.0 2.5 115 chr3L 4839580 intron CG13707 - chr3L 4839638 intron CG13707 - chr3L 4839695 intron CG13707 - chr3L_10_4835001 chr3L_4835001 RAL-832 866 chr3L 5034136 5034192 chr3L 5043308 5043364 roo 9 9168 2.5 4.0 3.2 2.1 9228 chr3L 5034136 intron Con - chr3L 5038750 intron Con - chr3L 5043364 intron Con - chr3L_9_5035001 chr3L_5035001 RAL-832 867 chr3L 5045455 5045472 chr3L 5050236 5050272 Doc 7 4784 6.0 5.0 5.5 1.1 4817 chr3L 5045455 intron Con - chr3L 5047864 intron Con - chr3L 5050272 intron Con - chr3L_7_5045001 chr3L_5045001 RAL-832 868 chr3L 5089013 5089060 chr3L 5089608 5089654 9 594 2.0 0.5 1.2 4.1 641 chr3L 5089013 intergenic not near genes chr3L 5089334 intergenic not near genes chr3L 5089654 intergenic not near genes chr3L_9_5085001 chr3L_5085001 RAL-832 869 chr3L 5101187 5101231 chr3L 5101286 5101331 15 96 2.5 3.5 3.0 3.8 144 chr3L 5101187 intergenic not near genes chr3L 5101259 intergenic not near genes chr3L 5101331 intergenic not near genes chr3L_15_5100001 chr3L_5100001 RAL-832 870 chr3L 5104463 5104512 chr3L 5124617 5124651 14 20145 4.0 2.0 3.0 3.5 20188 chr3L 5104463 intergenic not near genes chr3L 5114557 intergenic not near genes chr3L 5124651 intergenic not near genes chr3L_14_5110001 chr3L_5110001 RAL-832 871 chr3L 5169295 5169327 chr3L 5169379 5169413 4 88 4.0 3.0 3.5 0.9 118 chr3L 5169295 intron shep - chr3L 5169354 intron shep - chr3L 5169413 intron shep - chr3L_4_5165001 chr3L_5165001 RAL-832 872 chr3L 5261158 5261171 chr3L 5261247 5261270 6 97 6.0 3.0 4.5 1.1 112 chr3L 5261158 intron shep - chr3L 5261214 intron shep - chr3L 5261270 intron shep - chr3L_6_5260001 chr3L_5260001 RAL-832 873 chr3L 5299145 5299180 chr3L 5306586 5306636 Quasimodo 16 7453 3.0 4.5 3.8 3.3 7491 chr3L 5299145 intergenic not near genes chr3L 5302890 intergenic not near genes chr3L 5306636 intergenic not near genes chr3L_16_5300001 chr3L_5300001 RAL-832 874 chr3L 5327448 5327478 chr3L 5327553 5327583 7 100 3.5 2.0 2.8 1.8 135 chr3L 5327448 intergenic not near genes chr3L 5327516 intergenic not near genes chr3L 5327583 intergenic not near genes chr3L_7_5325001 chr3L_5325001 RAL-832 875 chr3L 5368829 5368835 chr3L 5368882 5368931 4 73 0.0 1.0 0.5 2.7 102 chr3L 5368829 intergenic not near genes chr3L 5368880 intergenic CR44515 + chr3L 5368931 intergenic CR44515 + chr3L_4_5365001 chr3L_5365001 RAL-832 876 chr3L 5393461 5393472 chr3L 5393643 5393644 4 180 2.5 1.0 1.8 1.4 183 chr3L 5393461 intergenic not near genes chr3L 5393552 intergenic not near genes chr3L 5393644 intergenic not near genes chr3L_4_5390001 chr3L_5390001 RAL-832 877 chr3L 5396490 5396495 chr3L 5396597 5396601 4 107 0.0 1.5 0.8 2.2 111 chr3L 5396490 intergenic not near genes chr3L 5396546 intergenic not near genes chr3L 5396601 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-832 878 chr3L 5399570 5399577 chr3L 5399677 5399684 4 107 0.5 0.0 0.2 3.3 114 chr3L 5399570 intergenic not near genes chr3L 5399627 intergenic not near genes chr3L 5399684 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-832 879 chr3L 5492921 5492970 chr3L 5493020 5493069 11 94 7.5 1.5 4.5 2.0 148 chr3L 5492921 intergenic CR44520 - chr3L 5492995 intergenic CR44520 - chr3L 5493069 intergenic CR44520 - chr3L_11_5490001 chr3L_5490001 RAL-832 880 chr3L 5531174 5531227 chr3L 5531275 5531328 5 93 2.5 2.5 2.5 1.4 154 chr3L 5531174 intergenic not near genes chr3L 5531251 intergenic not near genes chr3L 5531328 intergenic not near genes chr3L_5_5530001 chr3L_5530001 RAL-832 881 chr3L 5537701 5537750 chr3L 5538063 5538101 jockey 7 351 2.5 4.5 3.5 1.6 400 chr3L 5537701 intergenic not near genes chr3L 5537901 intergenic not near genes chr3L 5538101 intergenic CG10625 - chr3L_7_5535001 chr3L_5535001 RAL-832 882 chr3L 5597794 5597832 chr3L 5597907 5597932 8 100 4.5 1.5 3.0 2.0 138 chr3L 5597794 intergenic CG5150 + chr3L 5597863 intergenic CG5150 + chr3L 5597932 intergenic not near genes chr3L_8_5595001 chr3L_5595001 RAL-832 883 chr3L 5801668 5801677 chr3L 5801761 5801784 6 100 0.0 0.0 0.0 6.0 116 chr3L 5801668 intron S6k - chr3L 5801726 intron S6k - chr3L 5801784 intron S6k - chr3L_6_5800001 chr3L_5800001 RAL-832 884 chr3L 5910013 5910062 chr3L 5910274 5910323 pogo 18 258 5.5 3.5 4.5 3.3 310 chr3L 5910013 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910323 intron CG13288 + chr3L_18_5910001 chr3L_5910001 RAL-832 885 chr3L 6001668 6001716 chr3L 6004388 6004436 jockey 15 2717 2.0 1.0 1.5 6.0 2768 chr3L 6001668 intron PVRAP + chr3L 6003052 intron PVRAP + chr3L 6004436 intron PVRAP + chr3L_15_6000001 chr3L_6000001 RAL-832 886 chr3L 6040354 6040376 chr3L 6042729 6042752 Doc 6 2375 3.0 4.5 3.8 1.2 2398 chr3L 6040354 intergenic Jon65Aiv + chr3L 6041553 intergenic not near genes chr3L 6042752 intergenic not near genes chr3L_6_6040001 chr3L_6040001 RAL-832 887 chr3L 6064995 6065023 chr3L 6065091 6065110 19 95 8.0 4.5 6.2 2.6 115 chr3L 6064995 intergenic not near genes chr3L 6065052 intergenic not near genes chr3L 6065110 intergenic not near genes chr3L_19_6065001 chr3L_6065001 RAL-832 888 chr3L 6102946 6102965 chr3L 6103038 6103062 8 99 5.0 2.0 3.5 1.8 116 chr3L 6102946 intron Ets65A + chr3L 6103004 intron Ets65A + chr3L 6103062 intron Ets65A + chr3L_8_6100001 chr3L_6100001 RAL-832 889 chr3L 6116675 6116726 chr3L 6116779 6116812 20 101 1.5 2.5 2.0 6.7 137 chr3L 6116675 intron Ets65A + chr3L 6116744 intron Ets65A + chr3L 6116812 intron Ets65A + chr3L_20_6115001 chr3L_6115001 RAL-832 890 chr3L 6155685 6155708 chr3L 6155781 6155814 8 104 5.5 7.5 6.5 1.1 129 chr3L 6155685 intergenic CR45421 - chr3L 6155750 intergenic not near genes chr3L 6155814 intergenic not near genes chr3L_8_6155001 chr3L_6155001 RAL-832 891 chr3L 6220920 6220945 chr3L 6230071 6230094 roo 5 9163 4.0 5.0 4.5 0.9 9174 chr3L 6220920 5` UTR pncr008:3L + chr3L 6225507 intergenic not near genes chr3L 6230094 intergenic not near genes chr3L_5_6225001 chr3L_6225001 RAL-832 892 chr3L 6233315 6233332 chr3L 6233432 6233473 4 128 2.0 3.5 2.8 1.1 158 chr3L 6233315 5` UTR BG642312 - chr3L 6233394 intergenic BG642312 -,CG42714 - chr3L 6233473 intergenic CG42714 -,BG642312 - chr3L_4_6230001 chr3L_6230001 RAL-832 893 chr3L 6293752 6293792 chr3L 6293854 6293894 8 99 3.0 2.0 2.5 2.3 142 chr3L 6293752 intergenic not near genes chr3L 6293823 intergenic not near genes chr3L 6293894 intergenic not near genes chr3L_8_6290001 chr3L_6290001 RAL-832 894 chr3L 6335016 6335036 chr3L 6335495 6335517 297 4 482 4.0 4.0 4.0 0.8 501 chr3L 6335016 intron CG13300 - chr3L 6335266 intron CG13300 - chr3L 6335517 intron CG13300 - chr3L_4_6335001 chr3L_6335001 RAL-832 895 chr3L 6405637 6405691 chr3L 6432121 6432160 roo 7 26482 4.0 3.5 3.8 1.5 26523 chr3L 6405637 intron CG42747 + chr3L 6418898 intron CG42747 + chr3L 6432160 intron CG42747 + chr3L_7_6415001 chr3L_6415001 RAL-832 896 chr3L 6442149 6442203 chr3L 6442348 6442397 12 198 34.5 28.5 31.5 0.4 248 chr3L 6442149 intron CG42747 + chr3L 6442273 intron CG42747 + chr3L 6442397 intron CG42747 + chr3L_12_6440001 chr3L_6440001 RAL-832 897 chr3L 6668972 6668995 chr3L 6669049 6669096 7 92 2.5 4.0 3.2 1.7 124 chr3L 6668972 intergenic not near genes chr3L 6669034 intergenic not near genes chr3L 6669096 intergenic not near genes chr3L_7_6665001 chr3L_6665001 RAL-832 898 chr3L 6781104 6781152 chr3L 6783137 6783182 Doc 8 2032 6.0 0.0 3.0 2.0 2078 chr3L 6781104 intergenic not near genes chr3L 6782143 intergenic not near genes chr3L 6783182 intergenic not near genes chr3L_8_6780001 chr3L_6780001 RAL-832 899 chr3L 6820629 6820636 chr3L 6820719 6820732 5 94 8.5 8.0 8.2 0.5 103 chr3L 6820629 intergenic not near genes chr3L 6820680 intergenic not near genes chr3L 6820732 intergenic not near genes chr3L_5_6820001 chr3L_6820001 RAL-832 900 chr3L 6844351 6844387 chr3L 6844517 6844553 11 160 2.5 3.5 3.0 2.8 202 chr3L 6844351 intergenic not near genes chr3L 6844452 intergenic not near genes chr3L 6844553 intergenic not near genes chr3L_11_6840001 chr3L_6840001 RAL-832 901 chr3L 6868699 6868741 chr3L 6868797 6868839 8 96 1.0 1.5 1.2 3.6 140 chr3L 6868699 intergenic not near genes chr3L 6868769 intergenic not near genes chr3L 6868839 intergenic not near genes chr3L_8_6865001 chr3L_6865001 RAL-832 902 chr3L 6887500 6887546 chr3L 6895011 6895042 roo 14 7506 4.5 8.0 6.2 1.9 7542 chr3L 6887500 intergenic not near genes chr3L 6891271 intergenic not near genes chr3L 6895042 intergenic not near genes chr3L_14_6890001 chr3L_6890001 RAL-832 903 chr3L 6907998 6908020 chr3L 6908103 6908107 5 101 10.0 0.0 5.0 0.8 109 chr3L 6907998 intergenic not near genes chr3L 6908052 intergenic not near genes chr3L 6908107 intergenic not near genes chr3L_5_6905001 chr3L_6905001 RAL-832 904 chr3L 6934316 6934355 chr3L 6934447 6934488 6 131 2.0 4.5 3.2 1.4 172 chr3L 6934316 exon CG14820 + chr3L 6934402 intron CG14820 + chr3L 6934488 exon CG14820 + chr3L_6_6930001 chr3L_6930001 RAL-832 905 chr3L 7187389 7187422 chr3L 7187484 7187524 7 92 0.5 4.5 2.5 2.0 135 chr3L 7187389 intron Dscam2 - chr3L 7187456 intron Dscam2 - chr3L 7187524 intron Dscam2 - chr3L_7_7185001 chr3L_7185001 RAL-832 906 chr3L 7377296 7377345 chr3L 7380421 7380459 297 8 3122 5.0 2.5 3.8 1.7 3163 chr3L 7377296 intron SMSr - chr3L 7378878 intron SMSr - chr3L 7380459 intron SMSr - chr3L_8_7375001 chr3L_7375001 RAL-832 907 chr3L 7480033 7480044 chr3L 7480142 7480142 4 106 5.5 0.0 2.8 1.1 109 chr3L 7480033 intergenic not near genes chr3L 7480088 intergenic not near genes chr3L 7480142 intergenic not near genes chr3L_4_7480001 chr3L_7480001 RAL-832 908 chr3L 7498752 7498785 chr3L 7503539 7503571 F-element 9 4790 5.0 5.0 5.0 1.5 4819 chr3L 7498752 5` UTR CG8539 - chr3L 7501162 intergenic not near genes chr3L 7503571 intergenic not near genes chr3L_9_7500001 chr3L_7500001 RAL-832 909 chr3L 7505397 7505436 chr3L 7505493 7505532 6 96 3.5 2.0 2.8 1.6 135 chr3L 7505397 intergenic CG7548 - chr3L 7505464 intergenic CG7548 - chr3L 7505532 intergenic CG7548 - chr3L_6_7505001 chr3L_7505001 RAL-832 910 chr3L 7524134 7524170 chr3L 7524231 7524263 5 98 4.5 0.0 2.2 1.6 129 chr3L 7524134 intron ltl + chr3L 7524198 intron ltl + chr3L 7524263 intron ltl + chr3L_5_7520001 chr3L_7520001 RAL-832 911 chr3L 7593689 7593735 chr3L 7593799 7593836 10 99 5.0 2.0 3.5 2.2 147 chr3L 7593689 intron CG33275 + chr3L 7593762 intron CG33275 + chr3L 7593836 intron CG33275 + chr3L_10_7590001 chr3L_7590001 RAL-832 912 chr3L 7793719 7793736 chr3L 7800762 7800806 297 8 7064 4.0 6.5 5.2 1.3 7087 chr3L 7793719 intron CG32369 - chr3L 7797262 intron CG32369 - chr3L 7800806 intron CG32369 - chr3L_8_7795001 chr3L_7795001 RAL-832 913 chr3L 7867795 7867802 chr3L 7867893 7867900 4 98 1.5 5.5 3.5 0.9 105 chr3L 7867795 intergenic Pdp1 - chr3L 7867848 intergenic Pdp1 - chr3L 7867900 intergenic not near genes chr3L_4_7865001 chr3L_7865001 RAL-832 914 chr3L 7876084 7876123 chr3L 7876183 7876222 9 99 0.0 0.0 0.0 9.0 138 chr3L 7876084 intron CG32365 + chr3L 7876153 intron CG32365 + chr3L 7876222 intron CG32365 + chr3L_9_7875001 chr3L_7875001 RAL-832 915 chr3L 7886503 7886536 chr3L 7889040 7889062 Stalker4 10 2529 2.5 3.0 2.8 2.6 2559 chr3L 7886503 intron CG32365 + chr3L 7887782 intron CG32365 + chr3L 7889062 intron CG32365 + chr3L_10_7885001 chr3L_7885001 RAL-832 916 chr3L 7916823 7916827 chr3L 7926014 7926018 roo 4 9191 8.0 3.5 5.8 0.6 9195 chr3L 7916823 3` UTR syd - chr3L 7921420 intron syd - chr3L 7926018 3` UTR syd - chr3L_4_7920001 chr3L_7920001 RAL-832 917 chr3L 7916829 7916860 chr3L 7926005 7926051 roo 9 9183 4.5 1.5 3.0 2.2 9222 chr3L 7916829 3` UTR syd - chr3L 7921440 intron syd - chr3L 7926051 3` UTR syd - chr3L_9_7920001 chr3L_7920001 RAL-832 918 chr3L 7939439 7939470 chr3L 7939540 7939572 10 101 6.0 4.0 5.0 1.7 133 chr3L 7939439 intergenic not near genes chr3L 7939506 intergenic not near genes chr3L 7939572 intergenic not near genes chr3L_10_7935001 chr3L_7935001 RAL-832 919 chr3L 7985362 7985388 chr3L 7987690 7987719 NOF 9 2333 5.5 4.0 4.8 1.6 2357 chr3L 7985362 intron nmo + chr3L 7986540 intron nmo + chr3L 7987719 intron nmo + chr3L_9_7985001 chr3L_7985001 RAL-832 920 chr3L 8226699 8226740 chr3L 8226818 8226849 6 115 4.5 0.0 2.2 1.9 150 chr3L 8226699 intergenic not near genes chr3L 8226774 intergenic not near genes chr3L 8226849 intergenic not near genes chr3L_6_8225001 chr3L_8225001 RAL-832 921 chr3L 8295806 8295824 chr3L 8295949 8295994 6 171 4.0 3.5 3.8 1.2 188 chr3L 8295806 intergenic CG7201 - chr3L 8295900 intergenic not near genes chr3L 8295994 intergenic not near genes chr3L_6_8295001 chr3L_8295001 RAL-832 922 chr3L 8314760 8314770 chr3L 8314873 8314883 6 113 0.0 5.5 2.8 1.6 123 chr3L 8314760 intron CG7185 - chr3L 8314822 intron CG7185 - chr3L 8314883 intron CG7185 - chr3L_6_8310001 chr3L_8310001 RAL-832 923 chr3L 8364504 8364532 chr3L 8364615 8364643 9 106 4.0 0.5 2.2 2.8 139 chr3L 8364504 intergenic not near genes chr3L 8364574 intergenic not near genes chr3L 8364643 intergenic not near genes chr3L_9_8360001 chr3L_8360001 RAL-832 924 chr3L 8451373 8451415 chr3L 8451471 8451513 20 94 5.0 5.5 5.2 3.2 140 chr3L 8451373 intron Gug + chr3L 8451443 intron Gug + chr3L 8451513 intron Gug + chr3L_20_8450001 chr3L_8450001 RAL-832 925 chr3L 8497878 8497915 chr3L 8498004 8498031 11 121 1.5 3.5 2.5 3.1 153 chr3L 8497878 intron CG43163 - chr3L 8497954 intron CG43163 - chr3L 8498031 intron CG43163 - chr3L_11_8495001 chr3L_8495001 RAL-832 926 chr3L 8551731 8551774 chr3L 8551834 8551877 5 102 3.0 3.5 3.2 1.2 146 chr3L 8551731 intron rhea + chr3L 8551804 intron rhea + chr3L 8551877 intron rhea + chr3L_5_8550001 chr3L_8550001 RAL-832 927 chr3L 8606780 8606801 chr3L 8607223 8607258 6 447 3.5 1.0 2.2 1.9 478 chr3L 8606780 intron CG6282 + chr3L 8607019 intron CG6282 + chr3L 8607258 intron CG6282 + chr3L_6_8605001 chr3L_8605001 RAL-832 928 chr3L 8717277 8717288 chr3L 8717457 8717475 4 188 1.0 5.0 3.0 1.0 198 chr3L 8717277 intergenic not near genes chr3L 8717376 intergenic not near genes chr3L 8717475 intergenic not near genes chr3L_4_8715001 chr3L_8715001 RAL-832 929 chr3L 8755368 8755403 chr3L 8755660 8755671 9 290 3.5 5.5 4.5 1.6 303 chr3L 8755368 intron Fhos + chr3L 8755520 intron Fhos + chr3L 8755671 intron Fhos + chr3L_9_8755001 chr3L_8755001 RAL-832 930 chr3L 8839707 8839747 chr3L 8839807 8839826 6 93 4.5 1.0 2.8 1.6 119 chr3L 8839707 intron dally + chr3L 8839766 intron dally + chr3L 8839826 intron dally + chr3L_6_8835001 chr3L_8835001 RAL-832 931 chr3L 8846190 8846205 chr3L 8846291 8846306 4 101 0.5 0.5 0.5 2.7 116 chr3L 8846190 intron dally + chr3L 8846248 intron dally + chr3L 8846306 intron dally + chr3L_4_8845001 chr3L_8845001 RAL-832 932 chr3L 9003929 9003975 chr3L 9004034 9004080 12 100 1.5 5.5 3.5 2.7 151 chr3L 9003929 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004080 intergenic not near genes chr3L_12_9000001 chr3L_9000001 RAL-832 933 chr3L 9011121 9011151 chr3L 9011227 9011248 8 98 1.5 4.0 2.8 2.1 127 chr3L 9011121 intergenic not near genes chr3L 9011184 intergenic not near genes chr3L 9011248 intergenic not near genes chr3L_8_9010001 chr3L_9010001 RAL-832 934 chr3L 9022743 9022759 chr3L 9022839 9022855 5 96 7.5 5.0 6.2 0.7 112 chr3L 9022743 intergenic not near genes chr3L 9022799 intergenic not near genes chr3L 9022855 intergenic not near genes chr3L_5_9020001 chr3L_9020001 RAL-832 935 chr3L 9022764 9022788 chr3L 9022845 9022884 8 93 4.5 6.0 5.2 1.3 120 chr3L 9022764 intergenic not near genes chr3L 9022824 intergenic not near genes chr3L 9022884 intergenic not near genes chr3L_8_9020001 chr3L_9020001 RAL-832 936 chr3L 9076935 9076952 chr3L 9084504 9084512 412 5 7566 3.0 4.0 3.5 1.1 7577 chr3L 9076935 exon Tequila + chr3L 9080724 intron Tequila + chr3L 9084512 exon Tequila + chr3L_5_9080001 chr3L_9080001 RAL-832 937 chr3L 9086900 9086935 chr3L 9087000 9087038 5 96 6.0 4.0 5.0 0.8 138 chr3L 9086900 exon Tequila + chr3L 9086969 exon Tequila + chr3L 9087038 exon Tequila + chr3L_5_9085001 chr3L_9085001 RAL-832 938 chr3L 9096184 9096205 chr3L 9096307 9096313 4 116 6.5 0.5 3.5 0.9 129 chr3L 9096184 intergenic not near genes chr3L 9096248 intergenic not near genes chr3L 9096313 intergenic not near genes chr3L_4_9095001 chr3L_9095001 RAL-832 939 chr3L 9111129 9111173 chr3L 9111225 9111266 8 88 2.5 1.5 2.0 2.7 137 chr3L 9111129 intron bol - chr3L 9111198 intron bol - chr3L 9111266 intron bol - chr3L_8_9110001 chr3L_9110001 RAL-832 940 chr3L 9115237 9115264 chr3L 9115330 9115353 6 96 4.0 2.5 3.2 1.4 116 chr3L 9115237 intron bol - chr3L 9115295 intron bol - chr3L 9115353 intron bol - chr3L_6_9115001 chr3L_9115001 RAL-832 941 chr3L 9164681 9164727 chr3L 9166167 9166199 hobo 12 1475 2.0 1.0 1.5 4.8 1518 chr3L 9164681 intron Rdl - chr3L 9165440 intron Rdl - chr3L 9166199 intron Rdl - chr3L_12_9165001 chr3L_9165001 RAL-832 942 chr3L 9241102 9241154 chr3L 9241202 9241254 13 96 2.5 1.5 2.0 4.3 152 chr3L 9241102 intergenic not near genes chr3L 9241178 intergenic not near genes chr3L 9241254 intergenic not near genes chr3L_13_9240001 chr3L_9240001 RAL-832 943 chr3L 9270599 9270612 chr3L 9278374 9278380 roo 5 7773 6.5 3.0 4.8 0.9 7781 chr3L 9270599 intron GluRIB + chr3L 9274490 intron GluRIB + chr3L 9278380 intron GluRIB + chr3L_5_9270001 chr3L_9270001 RAL-832 944 chr3L 9270613 9270644 chr3L 9278371 9278410 roo 5 7767 2.0 2.5 2.2 1.6 7797 chr3L 9270613 intron GluRIB + chr3L 9274512 intron GluRIB + chr3L 9278410 exon GluRIB + chr3L_5_9270001 chr3L_9270001 RAL-832 945 chr3L 9428674 9428706 chr3L 9428758 9428806 8 95 7.0 4.5 5.8 1.2 132 chr3L 9428674 intergenic Shc +,RpS17 - chr3L 9428740 intergenic RpS17 -,Shc + chr3L 9428806 3` UTR RpS17 - chr3L_8_9425001 chr3L_9425001 RAL-832 946 chr3L 9443490 9443521 chr3L 9445301 9445307 S-element 4 1799 8.0 1.5 4.8 0.7 1817 chr3L 9443490 intron CG33926 + chr3L 9444398 intron CG33926 + chr3L 9445307 intron CG33926 + chr3L_4_9440001 chr3L_9440001 RAL-832 947 chr3L 9501684 9501723 chr3L 9502187 9502219 roo 6 499 2.5 3.0 2.8 1.6 535 chr3L 9501684 intron path - chr3L 9501952 intron path - chr3L 9502219 intron path - chr3L_6_9500001 chr3L_9500001 RAL-832 948 chr3L 9502597 9502615 chr3L 9502697 9502715 5 100 9.0 4.0 6.5 0.7 118 chr3L 9502597 intron path - chr3L 9502656 intron path - chr3L 9502715 intron path - chr3L_5_9500001 chr3L_9500001 RAL-832 949 chr3L 9502617 9502643 chr3L 9502696 9502743 6 93 4.0 2.5 3.2 1.4 126 chr3L 9502617 intron path - chr3L 9502680 intron path - chr3L 9502743 intron path - chr3L_6_9500001 chr3L_9500001 RAL-832 950 chr3L 9503449 9503463 chr3L 9503553 9503572 6 105 2.5 5.5 4.0 1.2 123 chr3L 9503449 intron path - chr3L 9503510 intron path - chr3L 9503572 intron path - chr3L_6_9500001 chr3L_9500001 RAL-832 951 chr3L 9510918 9510949 chr3L 9511029 9511030 4 104 0.0 1.5 0.8 2.2 112 chr3L 9510918 intron RpS9 - chr3L 9510974 intron RpS9 - chr3L 9511030 intron RpS9 - chr3L_4_9510001 chr3L_9510001 RAL-832 952 chr3L 9571885 9571904 chr3L 9572253 9572253 jockey 6 363 2.5 0.0 1.2 2.7 368 chr3L 9571885 intron CG42673 + chr3L 9572069 intron CG42673 + chr3L 9572253 intron CG42673 + chr3L_6_9570001 chr3L_9570001 RAL-832 953 chr3L 9639007 9639048 chr3L 9639112 9639153 5 103 0.0 4.0 2.0 1.7 146 chr3L 9639007 intron,3` UTR fry -,CG8329 + chr3L 9639080 intron fry - chr3L 9639153 intron fry - chr3L_5_9635001 chr3L_9635001 RAL-832 954 chr3L 9715584 9715623 chr3L 9715680 9715720 8 92 5.0 5.5 5.2 1.3 136 chr3L 9715584 intron vsg + chr3L 9715652 intron vsg + chr3L 9715720 intron vsg + chr3L_8_9715001 chr3L_9715001 RAL-832 955 chr3L 9796547 9796581 chr3L 9796657 9796681 9 106 5.5 3.5 4.5 1.6 134 chr3L 9796547 intron Zasp67 - chr3L 9796614 intron Zasp67 - chr3L 9796681 intron Zasp67 - chr3L_9_9795001 chr3L_9795001 RAL-832 956 chr3L 9822584 9822608 chr3L 9822670 9822714 7 93 3.5 4.5 4.0 1.4 130 chr3L 9822584 intron CG43897 + chr3L 9822649 intron CG43897 + chr3L 9822714 intron CG43897 + chr3L_7_9820001 chr3L_9820001 RAL-832 957 chr3L 9824148 9824170 chr3L 9824247 9824249 10 96 4.0 0.0 2.0 3.3 101 chr3L 9824148 intron CG43897 + chr3L 9824198 intron CG43897 + chr3L 9824249 intron CG43897 + chr3L_10_9820001 chr3L_9820001 RAL-832 958 chr3L 9929663 9929701 chr3L 9938463 9938480 roo 7 8796 1.0 5.5 3.2 1.7 8817 chr3L 9929663 intron CG34356 + chr3L 9934072 intron CG34356 + chr3L 9938480 intron CG34356 + chr3L_7_9930001 chr3L_9930001 RAL-832 959 chr3L 9947288 9947322 chr3L 9947397 9947431 9 107 1.0 1.5 1.2 4.1 143 chr3L 9947288 intron CG34356 + chr3L 9947360 intron CG34356 + chr3L 9947431 intron CG34356 + chr3L_9_9945001 chr3L_9945001 RAL-832 960 chr3L 10003134 10003169 chr3L 10003249 10003286 7 113 4.0 1.5 2.8 1.8 152 chr3L 10003134 intron dpr6 + chr3L 10003210 intron dpr6 + chr3L 10003286 intron dpr6 + chr3L_7_10000001 chr3L_10000001 RAL-832 961 chr3L 10032551 10032560 chr3L 10032658 10032667 4 107 0.0 2.5 1.2 1.8 116 chr3L 10032551 intron dpr6 + chr3L 10032609 intron dpr6 + chr3L 10032667 intron dpr6 + chr3L_4_10030001 chr3L_10030001 RAL-832 962 chr3L 10099141 10099187 chr3L 10099269 10099284 4 123 1.0 4.0 2.5 1.1 143 chr3L 10099141 intron dpr6 + chr3L 10099212 intron dpr6 + chr3L 10099284 intron dpr6 + chr3L_4_10095001 chr3L_10095001 RAL-832 963 chr3L 10191292 10191315 chr3L 10191405 10191446 9 125 0.5 6.0 3.2 2.1 154 chr3L 10191292 intron ect - chr3L 10191369 intron ect - chr3L 10191446 intron ect - chr3L_9_10190001 chr3L_10190001 RAL-832 964 chr3L 10214797 10214830 chr3L 10214914 10214927 10 116 3.0 2.0 2.5 2.9 130 chr3L 10214797 intergenic not near genes chr3L 10214862 intergenic not near genes chr3L 10214927 intergenic not near genes chr3L_10_10210001 chr3L_10210001 RAL-832 965 chr3L 10219226 10219269 chr3L 10219343 10219365 13 110 1.5 4.0 2.8 3.4 139 chr3L 10219226 exon CG32055 - chr3L 10219296 exon CG32055 - chr3L 10219365 exon CG32055 - chr3L_13_10215001 chr3L_10215001 RAL-832 966 chr3L 10250316 10250356 chr3L 10250422 10250466 13 103 1.5 1.5 1.5 5.2 150 chr3L 10250316 intergenic not near genes chr3L 10250391 intergenic not near genes chr3L 10250466 intergenic not near genes chr3L_13_10250001 chr3L_10250001 RAL-832 967 chr3L 10298649 10298692 chr3L 10298756 10298782 10 103 0.5 3.5 2.0 3.3 133 chr3L 10298649 intergenic not near genes chr3L 10298716 intergenic not near genes chr3L 10298782 intergenic not near genes chr3L_10_10295001 chr3L_10295001 RAL-832 968 chr3L 10310338 10310375 chr3L 10310455 10310487 7 116 3.0 2.0 2.5 2.0 149 chr3L 10310338 intergenic not near genes chr3L 10310412 intergenic not near genes chr3L 10310487 intergenic not near genes chr3L_7_10310001 chr3L_10310001 RAL-832 969 chr3L 10328098 10328125 chr3L 10328230 10328257 11 130 7.0 3.5 5.2 1.8 159 chr3L 10328098 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328257 intergenic not near genes chr3L_11_10325001 chr3L_10325001 RAL-832 970 chr3L 10414946 10414955 chr3L 10417338 10417347 Doc 4 2391 8.0 6.0 7.0 0.5 2401 chr3L 10414946 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417347 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-832 971 chr3L 10551454 10551490 chr3L 10551561 10551586 10 101 1.5 9.0 5.2 1.6 132 chr3L 10551454 intron A2bp1 + chr3L 10551520 intron A2bp1 + chr3L 10551586 intron A2bp1 + chr3L_10_10550001 chr3L_10550001 RAL-832 972 chr3L 10584271 10584300 chr3L 10584366 10584407 17 99 5.0 7.5 6.2 2.4 136 chr3L 10584271 intron A2bp1 + chr3L 10584339 intron A2bp1 + chr3L 10584407 intron A2bp1 + chr3L_17_10580001 chr3L_10580001 RAL-832 973 chr3L 10600452 10600477 chr3L 10600544 10600579 8 99 3.5 1.5 2.5 2.3 127 chr3L 10600452 intergenic not near genes chr3L 10600516 intergenic not near genes chr3L 10600579 intergenic not near genes chr3L_8_10600001 chr3L_10600001 RAL-832 974 chr3L 10621853 10621859 chr3L 10621940 10621948 4 98 4.5 2.5 3.5 0.9 95 chr3L 10621853 intergenic not near genes chr3L 10621900 intergenic not near genes chr3L 10621948 intergenic not near genes chr3L_4_10620001 chr3L_10620001 RAL-832 975 chr3L 10658069 10658212 chr3L 10658166 10658359 22 123 0.0 0.0 0.0 22.0 290 chr3L 10658069 intron CG32066 - chr3L 10658214 intron CG32066 - chr3L 10658359 intron CG32066 - chr3L_22_10655001 chr3L_10655001 RAL-832 976 chr3L 10745518 10745568 chr3L 10745618 10745668 16 97 3.0 5.5 4.2 3.1 150 chr3L 10745518 intergenic not near genes chr3L 10745593 intergenic not near genes chr3L 10745668 intergenic not near genes chr3L_16_10745001 chr3L_10745001 RAL-832 977 chr3L 10887363 10887364 chr3L 10887452 10887463 4 95 0.0 5.0 2.5 1.1 100 chr3L 10887363 intergenic not near genes chr3L 10887413 intergenic not near genes chr3L 10887463 intergenic not near genes chr3L_4_10885001 chr3L_10885001 RAL-832 978 chr3L 10910860 10910876 chr3L 10910969 10910988 11 108 4.0 6.5 5.2 1.8 128 chr3L 10910860 intergenic not near genes chr3L 10910924 intergenic not near genes chr3L 10910988 intergenic not near genes chr3L_11_10910001 chr3L_10910001 RAL-832 979 chr3L 10958220 10958238 chr3L 10958291 10958338 8 86 2.5 0.5 1.5 3.2 118 chr3L 10958220 intergenic not near genes chr3L 10958279 intergenic not near genes chr3L 10958338 intergenic not near genes chr3L_8_10955001 chr3L_10955001 RAL-832 980 chr3L 11083486 11083534 chr3L 11083604 11083652 16 115 3.5 6.0 4.8 2.8 166 chr3L 11083486 intron JIL-1 - chr3L 11083569 intron JIL-1 - chr3L 11083652 intron JIL-1 - chr3L_16_11080001 chr3L_11080001 RAL-832 981 chr3L 11085670 11085702 chr3L 11085772 11085805 8 100 1.0 9.5 5.2 1.3 135 chr3L 11085670 exon JIL-1 - chr3L 11085738 intron JIL-1 - chr3L 11085805 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 RAL-832 982 chr3L 11105281 11105291 chr3L 11107012 11107021 X-element 4 1731 6.0 0.0 3.0 1.0 1740 chr3L 11105281 intergenic not near genes chr3L 11106151 intergenic not near genes chr3L 11107021 3` UTR CG32073 - chr3L_4_11105001 chr3L_11105001 RAL-832 983 chr3L 11105292 11105325 chr3L 11107008 11107021 X-element 5 1712 3.0 0.0 1.5 2.0 1729 chr3L 11105292 intergenic not near genes chr3L 11106156 intergenic not near genes chr3L 11107021 3` UTR CG32073 - chr3L_5_11105001 chr3L_11105001 RAL-832 984 chr3L 11135515 11135526 chr3L 11135764 11135766 4 247 0.5 0.0 0.2 3.3 251 chr3L 11135515 intergenic CG14143 + chr3L 11135640 intergenic CG14143 +,CG32082 + chr3L 11135766 intergenic CG32082 +,CG14143 + chr3L_4_11135001 chr3L_11135001 RAL-832 985 chr3L 11145536 11145556 chr3L 11145643 11145666 8 106 0.0 3.0 1.5 3.2 130 chr3L 11145536 intron CG32082 + chr3L 11145601 intron CG32082 + chr3L 11145666 intron CG32082 + chr3L_8_11145001 chr3L_11145001 RAL-832 986 chr3L 11180639 11180658 chr3L 11180767 11180786 5 127 1.0 6.0 3.5 1.1 147 chr3L 11180639 intron GlcAT-P - chr3L 11180712 intron GlcAT-P - chr3L 11180786 intron GlcAT-P - chr3L_5_11180001 chr3L_11180001 RAL-832 987 chr3L 11217491 11217523 chr3L 11217594 11217625 13 99 5.5 0.0 2.8 3.4 134 chr3L 11217491 intron CG42671 + chr3L 11217558 intron CG42671 + chr3L 11217625 intron CG42671 + chr3L_13_11215001 chr3L_11215001 RAL-832 988 chr3L 11241773 11241787 chr3L 11241865 11241889 6 100 0.0 3.0 1.5 2.4 116 chr3L 11241773 intergenic not near genes chr3L 11241831 intergenic not near genes chr3L 11241889 intergenic not near genes chr3L_6_11240001 chr3L_11240001 RAL-832 989 chr3L 11264464 11264493 chr3L 11271416 11271455 17.6 8 6963 3.5 1.5 2.5 2.3 6991 chr3L 11264464 intergenic not near genes chr3L 11267960 intergenic not near genes chr3L 11271455 intergenic not near genes chr3L_8_11265001 chr3L_11265001 RAL-832 990 chr3L 11279010 11279035 chr3L 11279305 11279310 5 295 9.0 2.0 5.5 0.8 300 chr3L 11279010 intergenic not near genes chr3L 11279160 intergenic not near genes chr3L 11279310 intergenic not near genes chr3L_5_11275001 chr3L_11275001 RAL-832 991 chr3L 11290605 11290655 chr3L 11290948 11290973 8 336 2.0 1.0 1.5 3.2 368 chr3L 11290605 intron CG6175 - chr3L 11290789 intron CG6175 - chr3L 11290973 intron CG6175 - chr3L_8_11290001 chr3L_11290001 RAL-832 992 chr3L 11303037 11303043 chr3L 11303133 11303134 6 100 1.0 0.0 0.5 4.0 97 chr3L 11303037 intergenic not near genes chr3L 11303086 intergenic not near genes chr3L 11303134 intergenic not near genes chr3L_6_11300001 chr3L_11300001 RAL-832 993 chr3L 11322830 11322884 chr3L 11323105 11323136 17 267 5.5 2.0 3.8 3.5 306 chr3L 11322830 intergenic not near genes chr3L 11322983 intergenic CR44721 - chr3L 11323136 intergenic CR44721 -,CR44722 + chr3L_17_11320001 chr3L_11320001 RAL-832 994 chr3L 11383941 11383995 chr3L 11384040 11384052 5 75 1.5 1.5 1.5 2.0 111 chr3L 11383941 intron CR42755 - chr3L 11383996 3` UTR CR42755 - chr3L 11384052 3` UTR CR42755 - chr3L_5_11380001 chr3L_11380001 RAL-832 995 chr3L 11474606 11474654 chr3L 11474715 11474723 10 100 2.5 3.5 3.0 2.5 117 chr3L 11474606 intergenic Vha16-2 + chr3L 11474664 intergenic Vha16-2 + chr3L 11474723 intergenic Vha16-2 + chr3L_10_11470001 chr3L_11470001 RAL-832 996 chr3L 11529020 11529046 chr3L 11529158 11529161 5 141 2.0 1.0 1.5 2.0 141 chr3L 11529020 intron Mob2 - chr3L 11529090 intron Mob2 - chr3L 11529161 intron Mob2 - chr3L_5_11525001 chr3L_11525001 RAL-832 997 chr3L 11579538 11579584 chr3L 11579662 11579670 5 114 2.0 4.5 3.2 1.2 132 chr3L 11579538 intergenic CG43390 - chr3L 11579604 intergenic CG43390 - chr3L 11579670 intergenic CG43390 - chr3L_5_11575001 chr3L_11575001 RAL-832 998 chr3L 11588737 11588758 chr3L 11588888 11588899 6 165 0.5 1.5 1.0 3.0 162 chr3L 11588737 intergenic not near genes chr3L 11588818 intergenic not near genes chr3L 11588899 intergenic not near genes chr3L_6_11585001 chr3L_11585001 RAL-832 999 chr3L 11590249 11590270 chr3L 11590359 11590380 6 110 0.5 6.0 3.2 1.4 131 chr3L 11590249 intergenic CG7377 + chr3L 11590314 intergenic CG7377 + chr3L 11590380 intergenic CG7377 +,CG33268 - chr3L_6_11590001 chr3L_11590001 RAL-832 1000 chr3L 11723078 11723085 chr3L 11727887 11727895 Doc 6 4812 6.5 8.0 7.2 0.7 4817 chr3L 11723078 3` UTR Bmcp + chr3L 11725486 intron Bmcp + chr3L 11727895 3` UTR Bmcp + chr3L_6_11725001 chr3L_11725001 RAL-832 1001 chr3L 11723087 11723111 chr3L 11727877 11727911 Doc 12 4805 1.0 6.5 3.8 2.5 4824 chr3L 11723087 3` UTR Bmcp + chr3L 11725499 intron Bmcp + chr3L 11727911 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 RAL-832 1002 chr3L 11744009 11744045 chr3L 11744122 11744138 6 112 2.0 3.0 2.5 1.7 129 chr3L 11744009 exon CG6024 - chr3L 11744074 intron CG6024 - chr3L 11744138 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-832 1003 chr3L 11757917 11757936 chr3L 11758023 11758053 4 112 2.5 0.0 1.2 1.8 136 chr3L 11757917 intron CG6024 - chr3L 11757985 intron CG6024 - chr3L 11758053 intron CG6024 - chr3L_4_11755001 chr3L_11755001 RAL-832 1004 chr3L 11770977 11771018 chr3L 11771078 11771124 13 99 5.0 3.0 4.0 2.6 147 chr3L 11770977 exon Muc68D - chr3L 11771050 exon Muc68D - chr3L 11771124 exon Muc68D - chr3L_13_11770001 chr3L_11770001 RAL-832 1005 chr3L 7749470 7749471 chr3L 11777678 11777678 6 4028207 12.0 4.0 8.0 0.7 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_9760001 chr3L_9760001 RAL-832 1006 chr3L 11777678 11777678 chr3L 12163305 12163305 4 385627 5.5 10.0 7.8 0.5 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_4_11970001 chr3L_11970001 RAL-832 1007 chr3L 11810539 11810555 chr3L 11810637 11810653 7 98 0.0 4.0 2.0 2.3 114 chr3L 11810539 intron CG42255 - chr3L 11810596 intron CG42255 - chr3L 11810653 exon CG42255 - chr3L_7_11810001 chr3L_11810001 RAL-832 1008 chr3L 11847154 11847174 chr3L 11847264 11847268 8 104 1.5 0.0 0.8 4.4 114 chr3L 11847154 intergenic CG12521 - chr3L 11847211 intergenic CG12521 - chr3L 11847268 intergenic CG12521 - chr3L_8_11845001 chr3L_11845001 RAL-832 1009 chr3L 11849331 11849355 chr3L 11849435 11849475 8 112 1.5 4.5 3.0 2.0 144 chr3L 11849331 intergenic not near genes chr3L 11849403 intergenic not near genes chr3L 11849475 intergenic not near genes chr3L_8_11845001 chr3L_11845001 RAL-832 1010 chr3L 11850131 11850157 chr3L 11850246 11850257 9 112 4.5 0.5 2.5 2.6 126 chr3L 11850131 intergenic not near genes chr3L 11850194 intergenic CG44837 - chr3L 11850257 intergenic CG44837 - chr3L_9_11850001 chr3L_11850001 RAL-832 1011 chr3L 11850159 11850162 chr3L 11850243 11850262 5 104 4.5 0.5 2.5 1.4 103 chr3L 11850159 intergenic CG44837 - chr3L 11850210 intergenic CG44837 - chr3L 11850262 intergenic CG44837 - chr3L_5_11850001 chr3L_11850001 RAL-832 1012 chr3L 11864552 11864576 chr3L 11865854 11865869 pogo 5 1300 0.0 7.0 3.5 1.1 1317 chr3L 11864552 intron CG44837 - chr3L 11865210 intron CG44837 - chr3L 11865869 intron CG44837 - chr3L_5_11865001 chr3L_11865001 RAL-832 1013 chr3L 11887239 11887260 chr3L 11887356 11887361 9 112 6.0 0.0 3.0 2.2 122 chr3L 11887239 intron CG44837 - chr3L 11887300 intron,3` UTR CG44837 -,CG5897 - chr3L 11887361 intron,3` UTR CG44837 -,CG5897 - chr3L_9_11885001 chr3L_11885001 RAL-832 1014 chr3L 11943504 11943519 chr3L 11943609 11943640 5 111 4.0 7.0 5.5 0.8 136 chr3L 11943504 intergenic Rpt4R +,CG5883 - chr3L 11943572 intergenic CG5883 -,Rpt4R + chr3L 11943640 3` UTR CG5883 - chr3L_5_11940001 chr3L_11940001 RAL-832 1015 chr3L 11945172 11945213 chr3L 11945261 11945298 11 91 1.5 3.0 2.2 3.4 126 chr3L 11945172 intergenic CG5883 - chr3L 11945235 intergenic CG5883 - chr3L 11945298 intergenic CG5883 - chr3L_11_11945001 chr3L_11945001 RAL-832 1016 chr3L 12013895 12013937 chr3L 12014002 12014046 6 100 2.5 0.0 1.2 2.7 151 chr3L 12013895 intron rols - chr3L 12013970 intron rols - chr3L 12014046 intron rols - chr3L_6_12010001 chr3L_12010001 RAL-832 1017 chr3L 12089069 12089081 chr3L 12089169 12089176 5 98 10.0 5.0 7.5 0.6 107 chr3L 12089069 exon CG17154 + chr3L 12089122 3` UTR CG17154 + chr3L 12089176 3` UTR CG17154 + chr3L_5_12085001 chr3L_12085001 RAL-832 1018 chr3L 12089083 12089109 chr3L 12089168 12089209 9 94 5.0 5.0 5.0 1.5 126 chr3L 12089083 3` UTR CG17154 + chr3L 12089146 3` UTR CG17154 + chr3L 12089209 3` UTR CG17154 + chr3L_9_12085001 chr3L_12085001 RAL-832 1019 chr3L 12170789 12170824 chr3L 12170881 12170926 4 97 0.5 6.5 3.5 0.9 137 chr3L 12170789 intron Rh7 - chr3L 12170858 intron Rh7 - chr3L 12170926 intron Rh7 - chr3L_4_12170001 chr3L_12170001 RAL-832 1020 chr3L 12467236 12467283 chr3L 12467341 12467387 9 104 0.0 3.0 1.5 3.6 151 chr3L 12467236 intron eyg - chr3L 12467312 intron eyg - chr3L 12467387 intron eyg - chr3L_9_12465001 chr3L_12465001 RAL-832 1021 chr3L 12491697 12491734 chr3L 12491787 12491827 15 92 2.5 4.0 3.2 3.6 130 chr3L 12491697 intergenic CG10657 -,CR45682 + chr3L 12491762 intergenic CG10657 -,CR45682 + chr3L 12491827 intergenic CG10657 -,CR45682 + chr3L_15_12490001 chr3L_12490001 RAL-832 1022 chr3L 12563988 12563994 chr3L 12564223 12564226 4 234 6.5 5.0 5.8 0.6 238 chr3L 12563988 intron sowah - chr3L 12564107 intron sowah - chr3L 12564226 intron sowah - chr3L_4_12560001 chr3L_12560001 RAL-832 1023 chr3L 12596163 12596199 chr3L 12596363 12596399 7 198 4.5 3.5 4.0 1.4 236 chr3L 12596163 intergenic ara + chr3L 12596281 intergenic ara + chr3L 12596399 intergenic ara + chr3L_7_12595001 chr3L_12595001 RAL-832 1024 chr3L 12614585 12614594 chr3L 12614743 12614752 4 158 0.0 5.5 2.8 1.1 167 chr3L 12614585 intron caup + chr3L 12614668 intron caup + chr3L 12614752 intron caup + chr3L_4_12610001 chr3L_12610001 RAL-832 1025 chr3L 12626137 12626159 chr3L 12626266 12626288 6 126 0.5 0.5 0.5 4.0 151 chr3L 12626137 intergenic not near genes chr3L 12626212 intergenic not near genes chr3L 12626288 intergenic not near genes chr3L_6_12625001 chr3L_12625001 RAL-832 1026 chr3L 12647959 12647973 chr3L 12648042 12648069 4 90 1.0 4.5 2.8 1.1 110 chr3L 12647959 5` UTR CR32111 + chr3L 12648014 5` UTR CR32111 + chr3L 12648069 5` UTR CR32111 + chr3L_4_12645001 chr3L_12645001 RAL-832 1027 chr3L 12799828 12799835 chr3L 12799936 12799963 7 121 14.5 9.0 11.8 0.5 135 chr3L 12799828 intron Atg1 - chr3L 12799896 intron Atg1 - chr3L 12799963 intron Atg1 - chr3L_7_12795001 chr3L_12795001 RAL-832 1028 chr3L 12857976 12858003 chr3L 12858090 12858117 6 109 2.0 2.5 2.2 1.9 141 chr3L 12857976 3` UTR CG32107 - chr3L 12858046 3` UTR CG32107 - chr3L 12858117 3` UTR CG32107 - chr3L_6_12855001 chr3L_12855001 RAL-832 1029 chr3L 12894798 12894812 chr3L 12894885 12894899 5 92 11.0 5.5 8.2 0.5 101 chr3L 12894798 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894899 intergenic CG14118 + chr3L_5_12890001 chr3L_12890001 RAL-832 1030 chr3L 12919284 12919300 chr3L 12924763 12924777 Rt1c 5 5476 2.0 3.0 2.5 1.4 5493 chr3L 12919284 intergenic not near genes chr3L 12922030 intergenic not near genes chr3L 12924777 intergenic not near genes chr3L_5_12920001 chr3L_12920001 RAL-832 1031 chr3L 12957783 12957815 chr3L 12962279 12962287 copia 10 4493 8.0 5.0 6.5 1.3 4504 chr3L 12957783 intergenic not near genes chr3L 12960035 intergenic not near genes chr3L 12962287 intergenic not near genes chr3L_10_12960001 chr3L_12960001 RAL-832 1032 chr3L 13007680 13007718 chr3L 13007772 13007810 11 90 1.0 2.0 1.5 4.4 130 chr3L 13007680 exon CG11263 + chr3L 13007745 3` UTR CG11263 + chr3L 13007810 3` UTR CG11263 + chr3L_11_13005001 chr3L_13005001 RAL-832 1033 chr3L 13015702 13015746 chr3L 13015804 13015846 15 100 3.0 3.5 3.2 3.6 144 chr3L 13015702 intergenic CG11267 +,MICAL-like - chr3L 13015774 intergenic CG11267 +,MICAL-like - chr3L 13015846 intergenic CG11267 + chr3L_15_13015001 chr3L_13015001 RAL-832 1034 chr3L 13045983 13046019 chr3L 13046156 13046184 4 178 2.0 2.5 2.2 1.2 201 chr3L 13045983 intron Syx13 + chr3L 13046084 intron Syx13 + chr3L 13046184 intron Syx13 + chr3L_4_13045001 chr3L_13045001 RAL-832 1035 chr3L 13052497 13052527 chr3L 13053128 13053138 4 625 1.5 3.0 2.2 1.2 641 chr3L 13052497 intergenic not near genes chr3L 13052818 intergenic not near genes chr3L 13053138 intergenic not near genes chr3L_4_13050001 chr3L_13050001 RAL-832 1036 chr3L 13080018 13080052 chr3L 13080118 13080157 6 93 2.5 1.0 1.8 2.1 139 chr3L 13080018 intergenic not near genes chr3L 13080088 intergenic not near genes chr3L 13080157 intergenic not near genes chr3L_6_13080001 chr3L_13080001 RAL-832 1037 chr3L 13144102 13144150 chr3L 13144198 13144247 6 95 3.5 1.5 2.5 1.7 145 chr3L 13144102 intergenic not near genes chr3L 13144174 intergenic not near genes chr3L 13144247 intergenic not near genes chr3L_6_13140001 chr3L_13140001 RAL-832 1038 chr3L 13148686 13148695 chr3L 13148746 13148760 7 74 1.5 3.5 2.5 2.0 74 chr3L 13148686 intergenic not near genes chr3L 13148723 intergenic not near genes chr3L 13148760 intergenic not near genes chr3L_7_13145001 chr3L_13145001 RAL-832 1039 chr3L 13206234 13206256 chr3L 13206322 13206341 6 88 2.0 5.0 3.5 1.3 107 chr3L 13206234 intergenic not near genes chr3L 13206288 intergenic not near genes chr3L 13206341 intergenic not near genes chr3L_6_13205001 chr3L_13205001 RAL-832 1040 chr3L 13214478 13214490 chr3L 13214635 13214656 4 163 2.5 0.0 1.2 1.8 178 chr3L 13214478 intergenic not near genes chr3L 13214567 intergenic not near genes chr3L 13214656 intergenic not near genes chr3L_4_13210001 chr3L_13210001 RAL-832 1041 chr3L 13315903 13315949 chr3L 13316187 13316208 7 278 0.0 2.0 1.0 3.5 305 chr3L 13315903 intergenic not near genes chr3L 13316056 intergenic not near genes chr3L 13316208 intergenic not near genes chr3L_7_13315001 chr3L_13315001 RAL-832 1042 chr3L 13432290 13432310 chr3L 13432409 13432409 6 114 4.0 2.0 3.0 1.5 119 chr3L 13432290 intron CG10713 - chr3L 13432350 intron CG10713 - chr3L 13432409 intron CG10713 - chr3L_6_13430001 chr3L_13430001 RAL-832 1043 chr3L 13477001 13477023 chr3L 13477098 13477100 4 92 0.0 3.5 1.8 1.4 99 chr3L 13477001 intergenic not near genes chr3L 13477050 intergenic stv + chr3L 13477100 intergenic stv + chr3L_4_13475001 chr3L_13475001 RAL-832 1044 chr3L 13535901 13535910 chr3L 13535997 13536001 4 94 6.5 6.0 6.2 0.6 100 chr3L 13535901 intergenic not near genes chr3L 13535951 intergenic not near genes chr3L 13536001 intergenic not near genes chr3L_4_13535001 chr3L_13535001 RAL-832 1045 chr3L 13596036 13596070 chr3L 13596153 13596181 8 128 3.0 0.0 1.5 3.2 145 chr3L 13596036 intron bru-3 - chr3L 13596108 intron bru-3 - chr3L 13596181 intron bru-3 - chr3L_8_13595001 chr3L_13595001 RAL-832 1046 chr3L 13670666 13670677 chr3L 13670732 13670744 4 76 1.0 3.5 2.2 1.2 78 chr3L 13670666 intron bru-3 - chr3L 13670705 intron bru-3 - chr3L 13670744 intron bru-3 - chr3L_4_13670001 chr3L_13670001 RAL-832 1047 chr3L 13692144 13692158 chr3L 13692252 13692266 4 108 1.5 4.0 2.8 1.1 122 chr3L 13692144 intron bru-3 - chr3L 13692205 intron bru-3 - chr3L 13692266 intron bru-3 - chr3L_4_13690001 chr3L_13690001 RAL-832 1048 chr3L 13692566 13692611 chr3L 13692662 13692702 4 95 1.5 1.0 1.2 1.8 136 chr3L 13692566 intron bru-3 - chr3L 13692634 intron bru-3 - chr3L 13692702 intron bru-3 - chr3L_4_13690001 chr3L_13690001 RAL-832 1049 chr3L 13804537 13804568 chr3L 13822831 13822855 roo 8 18295 4.0 3.0 3.5 1.8 18318 chr3L 13804537 intergenic not near genes chr3L 13813696 intergenic not near genes chr3L 13822855 intergenic not near genes chr3L_8_13810001 chr3L_13810001 RAL-832 1050 chr3L 13907581 13907623 chr3L 13907678 13907724 10 99 5.0 4.0 4.5 1.8 143 chr3L 13907581 3` UTR Rgl - chr3L 13907652 3` UTR Rgl - chr3L 13907724 3` UTR Rgl - chr3L_10_13905001 chr3L_13905001 RAL-832 1051 chr3L 13941606 13941612 chr3L 13941720 13941724 4 114 14.0 6.0 10.0 0.4 118 chr3L 13941606 intron CG32137 + chr3L 13941665 intron CG32137 + chr3L 13941724 intron CG32137 + chr3L_4_13940001 chr3L_13940001 RAL-832 1052 chr3L 13941621 13941648 chr3L 13941708 13941761 10 106 6.0 4.0 5.0 1.7 140 chr3L 13941621 intron CG32137 + chr3L 13941691 intron CG32137 + chr3L 13941761 intron CG32137 + chr3L_10_13940001 chr3L_13940001 RAL-832 1053 chr3L 14141393 14141412 chr3L 14141500 14141519 8 106 2.5 0.0 1.2 3.6 126 chr3L 14141393 intergenic not near genes chr3L 14141456 intergenic not near genes chr3L 14141519 intergenic not near genes chr3L_8_14140001 chr3L_14140001 RAL-832 1054 chr3L 14194703 14194741 chr3L 14194798 14194832 13 95 3.5 5.0 4.2 2.5 129 chr3L 14194703 intron nuf + chr3L 14194768 intron nuf + chr3L 14194832 intron nuf + chr3L_13_14190001 chr3L_14190001 RAL-832 1055 chr3L 14245553 14245594 chr3L 14245662 14245694 1360 9 106 5.0 5.0 5.0 1.5 141 chr3L 14245553 3` UTR CR44561 - chr3L 14245624 3` UTR CR44561 - chr3L 14245694 intergenic CR44561 -,CR44560 + chr3L_9_14245001 chr3L_14245001 RAL-832 1056 chr3L 14267367 14267401 chr3L 14271812 14271834 F-element 11 4442 3.0 3.5 3.2 2.6 4467 chr3L 14267367 intergenic not near genes chr3L 14269600 intergenic not near genes chr3L 14271834 intergenic not near genes chr3L_11_14265001 chr3L_14265001 RAL-832 1057 chr3L 14295978 14296007 chr3L 14296470 14296492 roo 6 496 0.5 5.5 3.0 1.5 514 chr3L 14295978 intron fz + chr3L 14296235 intron fz + chr3L 14296492 intron fz + chr3L_6_14295001 chr3L_14295001 RAL-832 1058 chr3L 14338277 14338326 chr3L 14338393 14338442 12 108 1.0 1.5 1.2 5.5 165 chr3L 14338277 intron fz + chr3L 14338360 intron fz + chr3L 14338442 intron fz + chr3L_12_14335001 chr3L_14335001 RAL-832 1059 chr3L 14356525 14356544 chr3L 14356615 14356618 5 87 5.0 0.5 2.8 1.3 93 chr3L 14356525 intron fz + chr3L 14356572 intron fz + chr3L 14356618 intron fz + chr3L_5_14355001 chr3L_14355001 RAL-832 1060 chr3L 14468432 14468475 chr3L 14473658 14473698 copia 7 5223 5.5 2.5 4.0 1.4 5266 chr3L 14468432 intron bbg - chr3L 14471065 intron bbg - chr3L 14473698 intron bbg - chr3L_7_14470001 chr3L_14470001 RAL-832 1061 chr3L 14531201 14531244 chr3L 14531334 14531376 12 128 4.5 4.0 4.2 2.3 175 chr3L 14531201 intron bbg - chr3L 14531288 intron bbg - chr3L 14531376 intron bbg - chr3L_12_14530001 chr3L_14530001 RAL-832 1062 chr3L 14541712 14541743 chr3L 14541812 14541812 8 94 6.5 3.0 4.8 1.4 100 chr3L 14541712 3` UTR CG9238 - chr3L 14541762 3` UTR CG9238 - chr3L 14541812 3` UTR CG9238 - chr3L_8_14540001 chr3L_14540001 RAL-832 1063 chr3L 14715705 14715752 chr3L 14715812 14715859 7 100 3.5 0.0 1.8 2.5 154 chr3L 14715705 intron ome + chr3L 14715782 intron ome + chr3L 14715859 intron ome + chr3L_7_14715001 chr3L_14715001 RAL-832 1064 chr3L 14870039 14870081 chr3L 14870135 14870162 9 92 4.0 7.5 5.8 1.3 123 chr3L 14870039 intron CG17839 + chr3L 14870100 intron CG17839 + chr3L 14870162 intron CG17839 + chr3L_9_14870001 chr3L_14870001 RAL-832 1065 chr3L 14893669 14893680 chr3L 14893756 14893771 4 93 2.5 4.0 3.2 1.0 102 chr3L 14893669 intergenic CG34245 - chr3L 14893720 intergenic CG34245 - chr3L 14893771 3` UTR CG34245 - chr3L_4_14890001 chr3L_14890001 RAL-832 1066 chr3L 14913908 14913932 chr3L 14913986 14914013 4 84 1.0 5.0 3.0 1.0 105 chr3L 14913908 intron DCX-EMAP + chr3L 14913960 intron DCX-EMAP + chr3L 14914013 intron DCX-EMAP + chr3L_4_14910001 chr3L_14910001 RAL-832 1067 chr3L 14922110 14922133 chr3L 14922208 14922261 5 112 2.0 2.5 2.2 1.6 151 chr3L 14922110 intron DCX-EMAP + chr3L 14922186 intron DCX-EMAP + chr3L 14922261 intron DCX-EMAP + chr3L_5_14920001 chr3L_14920001 RAL-832 1068 chr3L 14933434 14933458 chr3L 14933531 14933560 7 101 5.5 4.0 4.8 1.2 126 chr3L 14933434 intron DCX-EMAP + chr3L 14933497 intron DCX-EMAP + chr3L 14933560 intron DCX-EMAP + chr3L_7_14930001 chr3L_14930001 RAL-832 1069 chr3L 14961864 14961912 chr3L 14962228 14962242 14 358 2.0 1.5 1.8 5.0 378 chr3L 14961864 intergenic not near genes chr3L 14962053 intergenic not near genes chr3L 14962242 intergenic not near genes chr3L_14_14960001 chr3L_14960001 RAL-832 1070 chr3L 15048121 15048149 chr3L 15048477 15048493 4 347 28.5 23.0 25.8 0.1 372 chr3L 15048121 intron Sytbeta - chr3L 15048307 intron Sytbeta - chr3L 15048493 intron Sytbeta - chr3L_4_15045001 chr3L_15045001 RAL-832 1071 chr3L 15085040 15085062 chr3L 15086219 15086243 1360 4 1181 7.0 2.0 4.5 0.7 1203 chr3L 15085040 intron cp309 - chr3L 15085642 intron cp309 - chr3L 15086243 intron cp309 - chr3L_4_15085001 chr3L_15085001 RAL-832 1072 chr3L 15177336 15177373 chr3L 15177431 15177446 6 92 4.5 3.5 4.0 1.2 110 chr3L 15177336 intergenic not near genes chr3L 15177391 intergenic not near genes chr3L 15177446 intergenic not near genes chr3L_6_15175001 chr3L_15175001 RAL-832 1073 chr3L 15219723 15219764 chr3L 15219825 15219866 9 102 4.0 2.0 3.0 2.2 143 chr3L 15219723 intergenic not near genes chr3L 15219794 intergenic not near genes chr3L 15219866 intergenic not near genes chr3L_9_15215001 chr3L_15215001 RAL-832 1074 chr3L 15233541 15233554 chr3L 15233642 15233655 5 101 5.0 5.5 5.2 0.8 114 chr3L 15233541 intergenic not near genes chr3L 15233598 intergenic not near genes chr3L 15233655 intergenic not near genes chr3L_5_15230001 chr3L_15230001 RAL-832 1075 chr3L 15233555 15233578 chr3L 15233641 15233679 4 95 2.5 5.5 4.0 0.8 124 chr3L 15233555 intergenic not near genes chr3L 15233617 intergenic not near genes chr3L 15233679 intergenic not near genes chr3L_4_15230001 chr3L_15230001 RAL-832 1076 chr3L 15257412 15257450 chr3L 15257645 15257678 6 231 1.0 2.0 1.5 2.4 266 chr3L 15257412 intergenic not near genes chr3L 15257545 intergenic not near genes chr3L 15257678 intergenic not near genes chr3L_6_15255001 chr3L_15255001 RAL-832 1077 chr3L 15295769 15295801 chr3L 15298612 15298664 gypsy5 8 2857 6.5 4.5 5.5 1.2 2895 chr3L 15295769 intergenic not near genes chr3L 15297216 intergenic not near genes chr3L 15298664 intergenic Best4 + chr3L_8_15295001 chr3L_15295001 RAL-832 1078 chr3L 15326311 15326350 chr3L 15326399 15326416 6 79 3.0 1.5 2.2 1.9 105 chr3L 15326311 intergenic not near genes chr3L 15326364 intergenic not near genes chr3L 15326416 intergenic not near genes chr3L_6_15325001 chr3L_15325001 RAL-832 1079 chr3L 15358344 15358394 chr3L 15358495 15358510 7 139 2.5 2.5 2.5 2.0 166 chr3L 15358344 intergenic not near genes chr3L 15358427 intergenic not near genes chr3L 15358510 intergenic not near genes chr3L_7_15355001 chr3L_15355001 RAL-832 1080 chr3L 15383971 15383996 chr3L 15384345 15384372 7 373 1.0 2.0 1.5 2.8 401 chr3L 15383971 intergenic not near genes chr3L 15384172 intergenic not near genes chr3L 15384372 intergenic not near genes chr3L_7_15380001 chr3L_15380001 RAL-832 1081 chr3L 15384940 15384989 chr3L 15385088 15385112 9 140 5.0 2.0 3.5 2.0 172 chr3L 15384940 intergenic not near genes chr3L 15385026 intergenic not near genes chr3L 15385112 intergenic not near genes chr3L_9_15385001 chr3L_15385001 RAL-832 1082 chr3L 15393654 15393692 chr3L 15393866 15393914 12 217 4.5 1.5 3.0 3.0 260 chr3L 15393654 intergenic not near genes chr3L 15393784 intergenic not near genes chr3L 15393914 intergenic not near genes chr3L_12_15390001 chr3L_15390001 RAL-832 1083 chr3L 15399816 15399864 chr3L 15399987 15399997 9 155 6.0 4.5 5.2 1.5 181 chr3L 15399816 intergenic not near genes chr3L 15399906 intergenic not near genes chr3L 15399997 intergenic not near genes chr3L_9_15395001 chr3L_15395001 RAL-832 1084 chr3L 15406001 15406052 chr3L 15406103 15406138 9 93 0.5 2.0 1.2 4.1 137 chr3L 15406001 intergenic not near genes chr3L 15406070 intergenic not near genes chr3L 15406138 intergenic not near genes chr3L_9_15405001 chr3L_15405001 RAL-832 1085 chr3L 15423750 15423784 chr3L 15426604 15426648 opus 12 2863 4.5 6.5 5.5 1.8 2898 chr3L 15423750 intergenic not near genes chr3L 15425199 intergenic not near genes chr3L 15426648 intergenic not near genes chr3L_12_15425001 chr3L_15425001 RAL-832 1086 chr3L 15443570 15443594 chr3L 15443666 15443690 4 96 5.5 2.5 4.0 0.8 120 chr3L 15443570 intergenic not near genes chr3L 15443630 intergenic not near genes chr3L 15443690 intergenic not near genes chr3L_4_15440001 chr3L_15440001 RAL-832 1087 chr3L 15463455 15463491 chr3L 15463552 15463594 9 104 7.0 4.0 5.5 1.4 139 chr3L 15463455 intergenic not near genes chr3L 15463524 intergenic not near genes chr3L 15463594 intergenic not near genes chr3L_9_15460001 chr3L_15460001 RAL-832 1088 chr3L 15466125 15466131 chr3L 15466237 15466247 5 113 0.0 5.0 2.5 1.4 122 chr3L 15466125 intergenic not near genes chr3L 15466186 intergenic not near genes chr3L 15466247 intergenic not near genes chr3L_5_15465001 chr3L_15465001 RAL-832 1089 chr3L 15482604 15482620 chr3L 15482691 15482721 6 97 5.5 7.0 6.2 0.8 117 chr3L 15482604 intergenic not near genes chr3L 15482662 intergenic not near genes chr3L 15482721 intergenic not near genes chr3L_6_15480001 chr3L_15480001 RAL-832 1090 chr3L 15554902 15554949 chr3L 15556709 15556756 S-element 16 1805 6.0 2.0 4.0 3.2 1854 chr3L 15554902 intron AGO2 + chr3L 15555829 intron AGO2 + chr3L 15556756 intron AGO2 + chr3L_16_15555001 chr3L_15555001 RAL-832 1091 chr3L 15600153 15600191 chr3L 15600254 15600312 6 116 4.5 0.5 2.5 1.7 159 chr3L 15600153 intron RhoGAP71E + chr3L 15600232 intron RhoGAP71E + chr3L 15600312 intron RhoGAP71E + chr3L_6_15600001 chr3L_15600001 RAL-832 1092 chr3L 15633163 15633216 chr3L 15633263 15633316 9 96 3.0 3.0 3.0 2.2 153 chr3L 15633163 intron comm3 - chr3L 15633240 intron comm3 - chr3L 15633316 intron comm3 - chr3L_9_15630001 chr3L_15630001 RAL-832 1093 chr3L 15641797 15641813 chr3L 15641897 15641918 4 104 0.0 4.0 2.0 1.3 121 chr3L 15641797 intron comm3 - chr3L 15641858 intron comm3 - chr3L 15641918 intron comm3 - chr3L_4_15640001 chr3L_15640001 RAL-832 1094 chr3L 15754359 15754384 chr3L 15754474 15754499 11 108 4.5 1.5 3.0 2.8 140 chr3L 15754359 intergenic not near genes chr3L 15754429 intergenic not near genes chr3L 15754499 intergenic not near genes chr3L_11_15750001 chr3L_15750001 RAL-832 1095 chr3L 15760660 15760669 chr3L 15760765 15760771 4 103 5.0 0.0 2.5 1.1 111 chr3L 15760660 intergenic not near genes chr3L 15760716 intergenic not near genes chr3L 15760771 intergenic not near genes chr3L_4_15760001 chr3L_15760001 RAL-832 1096 chr3L 15768991 15769007 chr3L 15769244 15769257 5 250 2.0 3.5 2.8 1.3 266 chr3L 15768991 intergenic not near genes chr3L 15769124 intergenic not near genes chr3L 15769257 intergenic not near genes chr3L_5_15765001 chr3L_15765001 RAL-832 1097 chr3L 15916287 15916331 chr3L 15916426 15916470 5 139 2.0 5.0 3.5 1.1 183 chr3L 15916287 intron sff - chr3L 15916378 intron sff - chr3L 15916470 intron sff - chr3L_5_15915001 chr3L_15915001 RAL-832 1098 chr3L 15929184 15929190 chr3L 15938351 15938357 roo 6 9166 8.5 4.0 6.2 0.8 9173 chr3L 15929184 intron Pka-C3 - chr3L 15933770 intron Pka-C3 - chr3L 15938357 intron Pka-C3 - chr3L_6_15930001 chr3L_15930001 RAL-832 1099 chr3L 15929196 15929223 chr3L 15938348 15938390 roo 11 9162 6.0 4.0 5.0 1.8 9194 chr3L 15929196 intron Pka-C3 - chr3L 15933793 intron Pka-C3 - chr3L 15938390 intron Pka-C3 - chr3L_11_15930001 chr3L_15930001 RAL-832 1100 chr3L 15946496 15946521 chr3L 15946590 15946597 5 89 5.0 0.0 2.5 1.4 101 chr3L 15946496 intron Pka-C3 - chr3L 15946546 intron Pka-C3 - chr3L 15946597 intron Pka-C3 - chr3L_5_15945001 chr3L_15945001 RAL-832 1101 chr3L 15981662 15981709 chr3L 15981763 15981810 5 101 3.5 1.5 2.5 1.4 148 chr3L 15981662 intron,3` UTR brm -,CG17027 + chr3L 15981736 intron,3` UTR brm -,CG17027 + chr3L 15981810 intron,3` UTR brm -,CG17027 + chr3L_5_15980001 chr3L_15980001 RAL-832 1102 chr3L 16070741 16070758 chr3L 16070825 16070845 4 86 4.5 2.0 3.2 1.0 104 chr3L 16070741 intron Mbs + chr3L 16070793 intron Mbs + chr3L 16070845 exon Mbs + chr3L_4_16070001 chr3L_16070001 RAL-832 1103 chr3L 16102270 16102280 chr3L 16102354 16102358 4 92 6.5 4.0 5.2 0.6 88 chr3L 16102270 exon CG5414 + chr3L 16102314 intron CG5414 + chr3L 16102358 intron CG5414 + chr3L_4_16100001 chr3L_16100001 RAL-832 1104 chr3L 16102285 16102300 chr3L 16102350 16102390 4 79 2.0 3.5 2.8 1.1 105 chr3L 16102285 exon CG5414 + chr3L 16102338 intron CG5414 + chr3L 16102390 intron CG5414 + chr3L_4_16100001 chr3L_16100001 RAL-832 1105 chr3L 16182056 16182089 chr3L 16182195 16182214 4 131 1.0 3.0 2.0 1.3 158 chr3L 16182056 intergenic not near genes chr3L 16182135 intergenic not near genes chr3L 16182214 intergenic not near genes chr3L_4_16180001 chr3L_16180001 RAL-832 1106 chr3L 16184096 16184101 chr3L 16188928 16188935 X-element 4 4834 10.0 2.0 6.0 0.6 4839 chr3L 16184096 intergenic not near genes chr3L 16186516 intergenic not near genes chr3L 16188935 intergenic not near genes chr3L_4_16185001 chr3L_16185001 RAL-832 1107 chr3L 16184102 16184141 chr3L 16188926 16188949 X-element 7 4829 4.5 2.0 3.2 1.7 4847 chr3L 16184102 intergenic not near genes chr3L 16186526 intergenic not near genes chr3L 16188949 intergenic not near genes chr3L_7_16185001 chr3L_16185001 RAL-832 1108 chr3L 16241907 16241928 chr3L 16241985 16242021 8 88 4.0 6.5 5.2 1.3 114 chr3L 16241907 intergenic not near genes chr3L 16241964 intergenic not near genes chr3L 16242021 intergenic not near genes chr3L_8_16240001 chr3L_16240001 RAL-832 1109 chr3L 16431809 16431863 chr3L 16431923 16431978 12 114 3.5 1.5 2.5 3.4 169 chr3L 16431809 intron,intron CG33158 +,dsx-c73A - chr3L 16431894 intron,intron CG33158 +,dsx-c73A - chr3L 16431978 intron,intron CG33158 +,dsx-c73A - chr3L_12_16430001 chr3L_16430001 RAL-832 1110 chr3L 16437050 16437104 chr3L 16437149 16437210 10 99 1.0 0.5 0.8 5.6 160 chr3L 16437050 intron,intron CG33158 +,dsx-c73A - chr3L 16437130 intron,intron CG33158 +,dsx-c73A - chr3L 16437210 intron,intron CG33158 +,dsx-c73A - chr3L_10_16435001 chr3L_16435001 RAL-832 1111 chr3L 16443843 16443860 chr3L 16446203 16446220 Doc 6 2358 2.0 2.5 2.2 1.9 2377 chr3L 16443843 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446220 intron,intron CG33158 +,dsx-c73A - chr3L_6_16445001 chr3L_16445001 RAL-832 1112 chr3L 16443862 16443876 chr3L 16446187 16446220 Doc 6 2345 1.5 2.0 1.8 2.1 2358 chr3L 16443862 intron,intron CG33158 +,dsx-c73A - chr3L 16445041 intron,intron CG33158 +,dsx-c73A - chr3L 16446220 intron,intron CG33158 +,dsx-c73A - chr3L_6_16445001 chr3L_16445001 RAL-832 1113 chr3L 16457528 16457541 chr3L 16457628 16457656 5 108 5.5 2.5 4.0 1.0 128 chr3L 16457528 intron CG33158 + chr3L 16457592 intron CG33158 + chr3L 16457656 intron CG33158 + chr3L_5_16455001 chr3L_16455001 RAL-832 1114 chr3L 16457900 16457909 chr3L 16457985 16457995 5 88 4.5 2.5 3.5 1.1 95 chr3L 16457900 intron CG33158 + chr3L 16457948 intron CG33158 + chr3L 16457995 intron CG33158 + chr3L_5_16455001 chr3L_16455001 RAL-832 1115 chr3L 16493998 16494011 chr3L 16494497 16494532 jockey 4 516 1.0 2.5 1.8 1.4 534 chr3L 16493998 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494265 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494532 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_4_16490001 chr3L_16490001 RAL-832 1116 chr3L 16533570 16533584 chr3L 16533676 16533715 4 122 3.0 2.0 2.5 1.1 145 chr3L 16533570 intron CG43373 - chr3L 16533642 intron CG43373 - chr3L 16533715 intron CG43373 - chr3L_4_16530001 chr3L_16530001 RAL-832 1117 chr3L 16540033 16540080 chr3L 16540141 16540188 11 106 6.5 2.5 4.5 2.0 155 chr3L 16540033 intron CG43373 - chr3L 16540110 intron CG43373 - chr3L 16540188 intron CG43373 - chr3L_11_16540001 chr3L_16540001 RAL-832 1118 chr3L 16563215 16563252 chr3L 16563313 16563338 7 92 3.0 0.5 1.8 2.5 123 chr3L 16563215 intergenic Mipp1 - chr3L 16563276 intergenic Mipp1 - chr3L 16563338 intergenic Mipp1 - chr3L_7_16560001 chr3L_16560001 RAL-832 1119 chr3L 16610664 16610716 chr3L 16610768 16610776 8 93 3.5 2.0 2.8 2.1 112 chr3L 16610664 3` UTR Su(P) - chr3L 16610720 3` UTR Su(P) - chr3L 16610776 exon Su(P) - chr3L_8_16610001 chr3L_16610001 RAL-832 1120 chr3L 16616516 16616539 chr3L 16621837 16621879 297 7 5331 3.0 1.5 2.2 2.2 5363 chr3L 16616516 3` UTR Abl - chr3L 16619198 3` UTR Abl - chr3L 16621879 3` UTR Abl - chr3L_7_16615001 chr3L_16615001 RAL-832 1121 chr3L 16684000 16684044 chr3L 16689241 16689285 copia 11 5240 3.5 2.5 3.0 2.8 5285 chr3L 16684000 intron,intron Lasp -,CG43954 - chr3L 16686642 intron,intron Lasp -,CG43954 - chr3L 16689285 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_11_16685001 chr3L_16685001 RAL-832 1122 chr3L 16714824 16714873 chr3L 16714928 16714977 20 102 4.5 4.5 4.5 3.6 153 chr3L 16714824 intron Dab + chr3L 16714900 intron Dab + chr3L 16714977 intron Dab + chr3L_20_16710001 chr3L_16710001 RAL-832 1123 chr3L 16735865 16735883 chr3L 16735988 16736004 7 120 4.0 6.5 5.2 1.1 139 chr3L 16735865 intron CG9701 + chr3L 16735934 intron CG9701 + chr3L 16736004 intron CG9701 + chr3L_7_16735001 chr3L_16735001 RAL-832 1124 chr3L 16786986 16786993 chr3L 16787075 16787089 5 93 0.0 6.5 3.2 1.2 103 chr3L 16786986 intergenic Int6 - chr3L 16787038 intergenic Int6 - chr3L 16787089 intergenic Int6 -,CG9674 - chr3L_5_16785001 chr3L_16785001 RAL-832 1125 chr3L 16807766 16808059 chr3L 16807865 16808144 18 96 6.5 4.5 5.5 2.8 378 chr3L 16807766 intron nudC + chr3L 16807955 intron nudC + chr3L 16808144 intron nudC + chr3L_18_16805001 chr3L_16805001 RAL-832 1126 chr3L 16814092 16814120 chr3L 16814514 16814536 5 413 3.5 2.5 3.0 1.2 444 chr3L 16814092 intron,intron nudC +,CG13024 - chr3L 16814314 intron,intron nudC +,CG13024 - chr3L 16814536 intron,intron nudC +,CG13024 - chr3L_5_16810001 chr3L_16810001 RAL-832 1127 chr3L 16866192 16866223 chr3L 16866303 16866329 8 109 2.0 2.0 2.0 2.7 137 chr3L 16866192 intron Lmpt + chr3L 16866260 intron Lmpt + chr3L 16866329 intron Lmpt + chr3L_8_16865001 chr3L_16865001 RAL-832 1128 chr3L 16869564 16869600 chr3L 16869660 16869703 11 98 4.0 6.0 5.0 1.8 139 chr3L 16869564 intron Lmpt + chr3L 16869634 intron Lmpt + chr3L 16869703 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RAL-832 1129 chr3L 16912909 16912956 chr3L 16913007 16913054 7 92 0.0 3.0 1.5 2.8 145 chr3L 16912909 intron Lmpt + chr3L 16912982 intron Lmpt + chr3L 16913054 intron Lmpt + chr3L_7_16910001 chr3L_16910001 RAL-832 1130 chr3L 16941381 16941403 chr3L 16941502 16941504 8 116 3.5 0.0 1.8 2.9 123 chr3L 16941381 intron Cpr73D - chr3L 16941442 intron Cpr73D - chr3L 16941504 intron Cpr73D - chr3L_8_16940001 chr3L_16940001 RAL-832 1131 chr3L 16945728 16945760 chr3L 16954880 16954901 roo 8 9148 1.5 2.5 2.0 2.7 9173 chr3L 16945728 exon Obp73a + chr3L 16950314 intergenic not near genes chr3L 16954901 5` UTR Nc73EF + chr3L_8_16950001 chr3L_16950001 RAL-832 1132 chr3L 17026791 17026815 chr3L 17026872 17026916 5 89 5.0 3.0 4.0 1.0 125 chr3L 17026791 exon Fit2 + chr3L 17026854 3` UTR Fit2 + chr3L 17026916 3` UTR Fit2 + chr3L_5_17025001 chr3L_17025001 RAL-832 1133 chr3L 17027147 17027186 chr3L 17027259 17027288 10 110 2.0 1.0 1.5 4.0 141 chr3L 17027147 intergenic Fit2 +,CG7730 + chr3L 17027218 intergenic Fit2 +,CG7730 + chr3L 17027288 intergenic Fit2 +,CG7730 + chr3L_10_17025001 chr3L_17025001 RAL-832 1134 chr3L 17034917 17034951 chr3L 17035125 17035158 G2 12 206 2.5 6.0 4.2 2.3 241 chr3L 17034917 intergenic not near genes chr3L 17035038 intergenic not near genes chr3L 17035158 intergenic not near genes chr3L_12_17035001 chr3L_17035001 RAL-832 1135 chr3L 17084985 17085036 chr3L 17094154 17094187 roo 15 9165 5.0 5.0 5.0 2.5 9202 chr3L 17084985 intron Rbp6 - chr3L 17089586 intron Rbp6 - chr3L 17094187 intron Rbp6 - chr3L_15_17085001 chr3L_17085001 RAL-832 1136 chr3L 17120631 17120682 chr3L 17120729 17120768 5 95 1.0 2.5 1.8 1.8 137 chr3L 17120631 intron Rbp6 - chr3L 17120700 intron Rbp6 - chr3L 17120768 intron Rbp6 - chr3L_5_17120001 chr3L_17120001 RAL-832 1137 chr3L 17183445 17183477 chr3L 17183542 17183569 9 94 2.5 6.0 4.2 1.7 124 chr3L 17183445 intron Rbp6 - chr3L 17183507 intron Rbp6 - chr3L 17183569 intron Rbp6 - chr3L_9_17180001 chr3L_17180001 RAL-832 1138 chr3L 17220799 17220816 chr3L 17220909 17220928 5 113 4.0 4.0 4.0 1.0 129 chr3L 17220799 intron Rbp6 - chr3L 17220864 intron Rbp6 - chr3L 17220928 intron Rbp6 - chr3L_5_17220001 chr3L_17220001 RAL-832 1139 chr3L 17295198 17295249 chr3L 17295294 17295297 12 81 1.0 2.5 1.8 4.3 99 chr3L 17295198 intergenic not near genes chr3L 17295248 intergenic not near genes chr3L 17295297 intergenic not near genes chr3L_12_17295001 chr3L_17295001 RAL-832 1140 chr3L 17408920 17408927 chr3L 17409004 17409023 4 91 7.5 8.5 8.0 0.4 103 chr3L 17408920 intron blot - chr3L 17408972 intron blot - chr3L 17409023 intron blot - chr3L_4_17405001 chr3L_17405001 RAL-832 1141 chr3L 17592783 17592817 chr3L 17592878 17592928 19 104 5.0 5.0 5.0 3.2 145 chr3L 17592783 intron Eip74EF - chr3L 17592856 intron Eip74EF - chr3L 17592928 intron Eip74EF - chr3L_19_17590001 chr3L_17590001 RAL-832 1142 chr3L 17659722 17659753 chr3L 17659809 17659847 12 92 5.5 6.0 5.8 1.8 125 chr3L 17659722 intergenic Crtc - chr3L 17659784 intergenic Crtc - chr3L 17659847 3` UTR Crtc - chr3L_12_17655001 chr3L_17655001 RAL-832 1143 chr3L 17730836 17730881 chr3L 17738186 17738220 mdg1 12 7345 8.5 3.5 6.0 1.7 7384 chr3L 17730836 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738220 intron Ccn + chr3L_12_17730001 chr3L_17730001 RAL-832 1144 chr3L 17790608 17790634 chr3L 17790889 17790894 4 275 0.5 3.5 2.0 1.3 286 chr3L 17790608 intergenic CG42815 - chr3L 17790751 intergenic CG42815 - chr3L 17790894 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 RAL-832 1145 chr3L 17834307 17834356 chr3L 17834491 17834525 9 181 0.5 3.0 1.8 3.2 218 chr3L 17834307 intron Grd + chr3L 17834416 intron Grd + chr3L 17834525 intron Grd + chr3L_9_17830001 chr3L_17830001 RAL-832 1146 chr3L 17837626 17837649 chr3L 17837712 17837720 6 95 0.0 0.0 0.0 6.0 94 chr3L 17837626 exon Grd + chr3L 17837673 intron Grd + chr3L 17837720 intron Grd + chr3L_6_17835001 chr3L_17835001 RAL-832 1147 chr3L 17884676 17884712 chr3L 17884795 17884832 11 114 3.5 1.5 2.5 3.1 156 chr3L 17884676 intergenic CG5506 - chr3L 17884754 intergenic CG5506 - chr3L 17884832 intergenic CG5506 - chr3L_11_17880001 chr3L_17880001 RAL-832 1148 chr3L 17887861 17887875 chr3L 17887966 17887980 6 105 3.5 8.0 5.8 0.9 119 chr3L 17887861 intron CG7402 + chr3L 17887920 intron CG7402 + chr3L 17887980 intron CG7402 + chr3L_6_17885001 chr3L_17885001 RAL-832 1149 chr3L 17918353 17918403 chr3L 17921176 17921226 opus 8 2822 0.5 3.5 2.0 2.7 2873 chr3L 17918353 intergenic not near genes chr3L 17919790 intergenic not near genes chr3L 17921226 intergenic not near genes chr3L_8_17915001 chr3L_17915001 RAL-832 1150 chr3L 17991570 17991585 chr3L 17991653 17991683 4 91 9.5 4.0 6.8 0.5 113 chr3L 17991570 intron Eip75B - chr3L 17991626 intron Eip75B - chr3L 17991683 intron Eip75B - chr3L_4_17990001 chr3L_17990001 RAL-832 1151 chr3L 18006214 18006255 chr3L 18006345 18006399 9 141 3.5 2.0 2.8 2.4 185 chr3L 18006214 intron Eip75B - chr3L 18006306 intron Eip75B - chr3L 18006399 intron Eip75B - chr3L_9_18005001 chr3L_18005001 RAL-832 1152 chr3L 18029968 18029978 chr3L 18030050 18030057 4 84 2.0 0.0 1.0 2.0 89 chr3L 18029968 intron Eip75B - chr3L 18030012 intron Eip75B - chr3L 18030057 intron Eip75B - chr3L_4_18030001 chr3L_18030001 RAL-832 1153 chr3L 18045022 18045046 chr3L 18045096 18045102 6 84 0.5 3.0 1.8 2.1 80 chr3L 18045022 intron Eip75B - chr3L 18045062 intron Eip75B - chr3L 18045102 intron Eip75B - chr3L_6_18045001 chr3L_18045001 RAL-832 1154 chr3L 18047686 18047738 chr3L 18056763 18056784 roo 14 9068 2.0 5.0 3.5 3.1 9098 chr3L 18047686 intron Eip75B - chr3L 18052235 intron Eip75B - chr3L 18056784 intron Eip75B - chr3L_14_18050001 chr3L_18050001 RAL-832 1155 chr3L 18119669 18119679 chr3L 18119756 18119795 4 110 0.0 4.5 2.2 1.2 126 chr3L 18119669 intron CG7341 + chr3L 18119732 intron CG7341 + chr3L 18119795 5` UTR CG7341 + chr3L_4_18115001 chr3L_18115001 RAL-832 1156 chr3L 18134597 18134638 chr3L 18134754 18134770 4 138 2.0 2.0 2.0 1.3 173 chr3L 18134597 intergenic not near genes chr3L 18134684 intergenic not near genes chr3L 18134770 intergenic not near genes chr3L_4_18130001 chr3L_18130001 RAL-832 1157 chr3L 18150302 18150339 chr3L 18150419 18150456 12 116 2.5 5.0 3.8 2.5 154 chr3L 18150302 intron CG7330 + chr3L 18150379 intron CG7330 + chr3L 18150456 intron CG7330 + chr3L_12_18150001 chr3L_18150001 RAL-832 1158 chr3L 18172675 18172698 chr3L 18172771 18172794 6 96 5.0 7.0 6.0 0.9 119 chr3L 18172675 intron W - chr3L 18172734 intron W - chr3L 18172794 intron W - chr3L_6_18170001 chr3L_18170001 RAL-832 1159 chr3L 18180933 18180982 chr3L 18181036 18181089 5 102 1.5 1.5 1.5 2.0 156 chr3L 18180933 intron W - chr3L 18181011 intron W - chr3L 18181089 intron W - chr3L_5_18180001 chr3L_18180001 RAL-832 1160 chr3L 18198929 18198931 chr3L 24821492 24821494 4 6622563 0.0 3.0 1.5 1.6 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-832 1161 chr3L 18223146 18223163 chr3L 18223249 18223266 6 103 7.5 0.0 3.8 1.2 120 chr3L 18223146 intergenic not near genes chr3L 18223206 intergenic not near genes chr3L 18223266 intergenic not near genes chr3L_6_18220001 chr3L_18220001 RAL-832 1162 chr3L 18248934 18248978 chr3L 18249052 18249086 10 117 4.0 0.5 2.2 3.1 152 chr3L 18248934 intergenic not near genes chr3L 18249010 intergenic not near genes chr3L 18249086 intergenic not near genes chr3L_10_18245001 chr3L_18245001 RAL-832 1163 chr3L 18255079 18255115 chr3L 18255170 18255209 9 88 1.5 3.5 2.5 2.6 130 chr3L 18255079 intergenic not near genes chr3L 18255144 intergenic not near genes chr3L 18255209 intergenic not near genes chr3L_9_18255001 chr3L_18255001 RAL-832 1164 chr3L 18262458 18262482 chr3L 18262561 18262585 7 99 11.0 6.0 8.5 0.7 127 chr3L 18262458 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262585 intergenic not near genes chr3L_7_18260001 chr3L_18260001 RAL-832 1165 chr3L 18301335 18301378 chr3L 18301439 18301487 15 104 1.5 4.0 2.8 3.9 152 chr3L 18301335 intergenic CG13700 - chr3L 18301411 intergenic CG13700 - chr3L 18301487 intergenic CG13700 - chr3L_15_18300001 chr3L_18300001 RAL-832 1166 chr3L 18406112 18406153 chr3L 18406208 18406249 8 93 2.5 2.0 2.2 2.5 137 chr3L 18406112 intergenic not near genes chr3L 18406180 intergenic not near genes chr3L 18406249 intergenic not near genes chr3L_8_18405001 chr3L_18405001 RAL-832 1167 chr3L 18408715 18408760 chr3L 18408821 18408846 11 100 5.0 2.5 3.8 2.3 131 chr3L 18408715 intergenic not near genes chr3L 18408780 intergenic not near genes chr3L 18408846 intergenic not near genes chr3L_11_18405001 chr3L_18405001 RAL-832 1168 chr3L 18436085 18436115 chr3L 18436253 18436271 5 165 2.0 0.0 1.0 2.5 186 chr3L 18436085 intergenic not near genes chr3L 18436178 intergenic not near genes chr3L 18436271 intergenic not near genes chr3L_5_18435001 chr3L_18435001 RAL-832 1169 chr3L 18438272 18438320 chr3L 18438367 18438378 10 83 4.0 1.5 2.8 2.6 106 chr3L 18438272 intergenic skl - chr3L 18438325 intergenic skl - chr3L 18438378 intergenic skl - chr3L_10_18435001 chr3L_18435001 RAL-832 1170 chr3L 18448600 18448610 chr3L 18448712 18448722 6 112 9.0 5.5 7.2 0.7 122 chr3L 18448600 intergenic not near genes chr3L 18448661 intergenic not near genes chr3L 18448722 intergenic not near genes chr3L_6_18445001 chr3L_18445001 RAL-832 1171 chr3L 18448611 18448616 chr3L 18448710 18448728 4 109 7.0 5.5 6.2 0.6 117 chr3L 18448611 intergenic not near genes chr3L 18448670 intergenic not near genes chr3L 18448728 intergenic not near genes chr3L_4_18445001 chr3L_18445001 RAL-832 1172 chr3L 18456263 18456296 chr3L 18456371 18456381 5 100 3.5 4.5 4.0 1.0 118 chr3L 18456263 intergenic CR44670 - chr3L 18456322 intergenic CR44670 - chr3L 18456381 intergenic CR44670 - chr3L_5_18455001 chr3L_18455001 RAL-832 1173 chr3L 18528608 18528653 chr3L 18537789 18537829 roo 11 9177 4.0 6.0 5.0 1.8 9221 chr3L 18528608 intergenic not near genes chr3L 18533218 intergenic not near genes chr3L 18537829 intergenic not near genes chr3L_11_18530001 chr3L_18530001 RAL-832 1174 chr3L 18593930 18593977 chr3L 18595930 18595934 Doc 17 1993 3.5 2.0 2.8 4.5 2004 chr3L 18593930 intergenic term - chr3L 18594932 intergenic not near genes chr3L 18595934 intergenic CR45389 + chr3L_17_18590001 chr3L_18590001 RAL-832 1175 chr3L 18615884 18615931 chr3L 18616001 18616039 14 114 5.0 3.5 4.2 2.7 155 chr3L 18615884 intron,intron CG13380 -,CG4174 - chr3L 18615962 intron,intron CG13380 -,CG4174 - chr3L 18616039 3` UTR,5` UTR CG13380 -,CG4174 - chr3L_14_18615001 chr3L_18615001 RAL-832 1176 chr3L 18638567 18638608 chr3L 18638681 18638714 8 104 4.5 4.5 4.5 1.5 147 chr3L 18638567 intron MYPT-75D + chr3L 18638640 intron MYPT-75D + chr3L 18638714 intron MYPT-75D + chr3L_8_18635001 chr3L_18635001 RAL-832 1177 chr3L 18645267 18645309 chr3L 18645386 18645394 13 109 3.5 6.0 4.8 2.2 127 chr3L 18645267 intron MYPT-75D + chr3L 18645330 intron MYPT-75D + chr3L 18645394 intron MYPT-75D + chr3L_13_18645001 chr3L_18645001 RAL-832 1178 chr3L 18710740 18710789 chr3L 18718712 18718761 Stalker2 15 7970 9.0 5.0 7.0 1.9 8021 chr3L 18710740 intergenic not near genes chr3L 18714750 intergenic not near genes chr3L 18718761 intergenic not near genes chr3L_15_18710001 chr3L_18710001 RAL-832 1179 chr3L 18772389 18772438 chr3L 18781090 18781130 roo 17 8695 4.5 2.5 3.5 3.8 8741 chr3L 18772389 intron ftz-f1 - chr3L 18776760 intron ftz-f1 - chr3L 18781130 intron ftz-f1 - chr3L_17_18775001 chr3L_18775001 RAL-832 1180 chr3L 18784377 18784406 chr3L 18784486 18784515 11 106 4.5 5.5 5.0 1.8 138 chr3L 18784377 intron ftz-f1 - chr3L 18784446 intron ftz-f1 - chr3L 18784515 intron ftz-f1 - chr3L_11_18780001 chr3L_18780001 RAL-832 1181 chr3L 18792559 18792575 chr3L 18792656 18792677 7 95 10.0 1.0 5.5 1.1 118 chr3L 18792559 intron ftz-f1 - chr3L 18792618 intron ftz-f1 - chr3L 18792677 intron ftz-f1 - chr3L_7_18790001 chr3L_18790001 RAL-832 1182 chr3L 18792576 18792605 chr3L 18792653 18792707 11 94 5.0 1.0 3.0 2.8 131 chr3L 18792576 intron ftz-f1 - chr3L 18792642 intron ftz-f1 - chr3L 18792707 intron ftz-f1 - chr3L_11_18790001 chr3L_18790001 RAL-832 1183 chr3L 18810138 18810144 chr3L 18810235 18810241 5 97 5.0 4.5 4.8 0.9 103 chr3L 18810138 intron CG14073 - chr3L 18810190 intron CG14073 - chr3L 18810241 intron CG14073 - chr3L_5_18810001 chr3L_18810001 RAL-832 1184 chr3L 18810145 18810174 chr3L 18810227 18810253 15 93 3.0 3.0 3.0 3.8 108 chr3L 18810145 intron CG14073 - chr3L 18810199 intron CG14073 - chr3L 18810253 intron CG14073 - chr3L_15_18810001 chr3L_18810001 RAL-832 1185 chr3L 18851407 18851435 chr3L 18851501 18851514 9 105 1.5 5.5 3.5 2.0 107 chr3L 18851407 intergenic not near genes chr3L 18851460 intergenic not near genes chr3L 18851514 intergenic not near genes chr3L_9_18850001 chr3L_18850001 RAL-832 1186 chr3L 18928292 18928341 chr3L 18928399 18928439 7 94 2.0 4.5 3.2 1.7 147 chr3L 18928292 intron CG32204 - chr3L 18928366 intron CG32204 - chr3L 18928439 intron CG32204 - chr3L_7_18925001 chr3L_18925001 RAL-832 1187 chr3L 18932267 18932294 chr3L 18932384 18932420 8 121 2.0 4.0 3.0 2.0 153 chr3L 18932267 intron CG32204 - chr3L 18932344 intron CG32204 - chr3L 18932420 intron CG32204 - chr3L_8_18930001 chr3L_18930001 RAL-832 1188 chr3L 18933604 18933653 chr3L 18933718 18933761 12 111 4.5 2.5 3.5 2.7 157 chr3L 18933604 intron CG32204 - chr3L 18933682 intron CG32204 - chr3L 18933761 intron CG32204 - chr3L_12_18930001 chr3L_18930001 RAL-832 1189 chr3L 18935835 18935861 chr3L 18935922 18935970 8 103 3.5 1.0 2.2 2.5 135 chr3L 18935835 intron CG32204 - chr3L 18935902 intron CG32204 - chr3L 18935970 intron CG32204 - chr3L_8_18935001 chr3L_18935001 RAL-832 1190 chr3L 18941163 18941205 chr3L 18941294 18941316 12 124 5.5 2.0 3.8 2.5 153 chr3L 18941163 intron CG32204 - chr3L 18941240 intron CG32204 - chr3L 18941316 intron CG32204 - chr3L_12_18940001 chr3L_18940001 RAL-832 1191 chr3L 19008839 19008878 chr3L 19009178 19009223 jockey 6 336 1.0 0.5 0.8 3.3 384 chr3L 19008839 intron nkd - chr3L 19009031 intron nkd - chr3L 19009223 intron nkd - chr3L_6_19005001 chr3L_19005001 RAL-832 1192 chr3L 19082040 19082044 chr3L 19082143 19082148 4 107 1.0 3.5 2.2 1.2 108 chr3L 19082040 intron Mkp3 - chr3L 19082094 intron Mkp3 - chr3L 19082148 intron Mkp3 - chr3L_4_19080001 chr3L_19080001 RAL-832 1193 chr3L 19082050 19082070 chr3L 19082140 19082161 4 98 0.5 1.5 1.0 2.0 111 chr3L 19082050 intron Mkp3 - chr3L 19082106 intron Mkp3 - chr3L 19082161 intron Mkp3 - chr3L_4_19080001 chr3L_19080001 RAL-832 1194 chr3L 19091121 19091169 chr3L 19091228 19091276 12 103 4.0 1.5 2.8 3.2 155 chr3L 19091121 intergenic CR45386 + chr3L 19091198 intergenic CR45386 + chr3L 19091276 intergenic CR45386 + chr3L_12_19090001 chr3L_19090001 RAL-832 1195 chr3L 19100468 19100503 chr3L 19101128 19101151 14 650 32.5 13.0 22.8 0.6 683 chr3L 19100468 intergenic Gem2 - chr3L 19100810 intergenic Gem2 - chr3L 19101151 intergenic not near genes chr3L_14_19100001 chr3L_19100001 RAL-832 1196 chr3L 19117032 19117072 chr3L 19124492 19124513 mdg1 4 7453 3.5 6.0 4.8 0.7 7481 chr3L 19117032 intron CG14082 - chr3L 19120772 intron CG14082 - chr3L 19124513 intron CG14082 - chr3L_4_19120001 chr3L_19120001 RAL-832 1197 chr3L 19216497 19216522 chr3L 19216594 19216609 8 96 3.5 0.0 1.8 2.9 112 chr3L 19216497 intron fz2 - chr3L 19216553 intron fz2 - chr3L 19216609 intron fz2 - chr3L_8_19215001 chr3L_19215001 RAL-832 1198 chr3L 19262188 19262243 chr3L 19262290 19262320 12 98 3.5 6.5 5.0 2.0 132 chr3L 19262188 3` UTR Bet1 + chr3L 19262254 3` UTR,3` UTR Bet1 +,Max - chr3L 19262320 3` UTR,3` UTR Bet1 +,Max - chr3L_12_19260001 chr3L_19260001 RAL-832 1199 chr3L 19342752 19342773 chr3L 19342852 19342869 6 103 7.0 2.0 4.5 1.1 117 chr3L 19342752 3` UTR CG32206 - chr3L 19342810 3` UTR CG32206 - chr3L 19342869 3` UTR CG32206 - chr3L_6_19340001 chr3L_19340001 RAL-832 1200 chr3L 19488482 19488499 chr3L 19488575 19488601 7 99 8.5 6.0 7.2 0.9 119 chr3L 19488482 intergenic pncr009:3L -,CG32212 + chr3L 19488542 intergenic pncr009:3L -,CG32212 + chr3L 19488601 intergenic pncr009:3L -,CG32212 + chr3L_7_19485001 chr3L_19485001 RAL-832 1201 chr3L 19527911 19527955 chr3L 19528004 19528054 24 93 5.0 7.0 6.0 3.4 143 chr3L 19527911 intergenic not near genes chr3L 19527982 intergenic not near genes chr3L 19528054 intergenic not near genes chr3L_24_19525001 chr3L_19525001 RAL-832 1202 chr3L 19605565 19605576 chr3L 19605666 19605684 5 105 5.5 6.0 5.8 0.7 119 chr3L 19605565 intron lush - chr3L 19605624 intron lush - chr3L 19605684 intron lush - chr3L_5_19605001 chr3L_19605001 RAL-832 1203 chr3L 19781178 19781211 chr3L 19781288 19781321 6 104 1.0 1.5 1.2 2.7 143 chr3L 19781178 intron,intron CG42637 -,Gyc76C - chr3L 19781250 intron,intron CG42637 -,Gyc76C - chr3L 19781321 intron,intron CG42637 -,Gyc76C - chr3L_6_19780001 chr3L_19780001 RAL-832 1204 chr3L 19792343 19792364 chr3L 19792458 19792479 7 112 9.0 13.0 11.0 0.6 136 chr3L 19792343 intron,intron CG42637 -,Gyc76C - chr3L 19792411 intron,intron CG42637 -,Gyc76C - chr3L 19792479 intron,intron CG42637 -,Gyc76C - chr3L_7_19790001 chr3L_19790001 RAL-832 1205 chr3L 19820291 19820299 chr3L 19827850 19827868 412 4 7564 4.0 2.5 3.2 1.0 7577 chr3L 19820291 intron Deaf1 + chr3L 19824080 intron Deaf1 + chr3L 19827868 intron Deaf1 + chr3L_4_19820001 chr3L_19820001 RAL-832 1206 chr3L 19861839 19861853 chr3L 19863618 19863661 S-element 4 1800 0.5 5.5 3.0 1.0 1822 chr3L 19861839 5` UTR CR45433 + chr3L 19862750 intergenic not near genes chr3L 19863661 intergenic not near genes chr3L_4_19860001 chr3L_19860001 RAL-832 1207 chr3L 19905158 19905205 chr3L 19905507 19905552 11 342 5.0 2.0 3.5 2.4 394 chr3L 19905158 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905355 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905552 intron,intron Mi-2 -,Su(Tpl) - chr3L_11_19905001 chr3L_19905001 RAL-832 1208 chr3L 19933520 19933557 chr3L 19934362 19934385 8 838 4.0 3.0 3.5 1.8 865 chr3L 19933520 intergenic CR45678 + chr3L 19933952 5` UTR CR45678 + chr3L 19934385 intergenic CR45678 + chr3L_8_19930001 chr3L_19930001 RAL-832 1209 chr3L 19949737 19949785 chr3L 19949835 19949883 13 93 4.5 2.5 3.5 2.9 146 chr3L 19949737 intron Ac76E + chr3L 19949810 intron Ac76E + chr3L 19949883 intron Ac76E + chr3L_13_19945001 chr3L_19945001 RAL-832 1210 chr3L 19961239 19961286 chr3L 19961335 19961383 13 95 3.5 1.5 2.5 3.7 144 chr3L 19961239 intron Ac76E + chr3L 19961311 intron Ac76E + chr3L 19961383 intron Ac76E + chr3L_13_19960001 chr3L_19960001 RAL-832 1211 chr3L 19981185 19981233 chr3L 19981285 19981333 15 94 5.5 5.0 5.2 2.4 148 chr3L 19981185 intergenic CG17732 + chr3L 19981259 intergenic CG17732 + chr3L 19981333 intergenic CG17732 + chr3L_15_19980001 chr3L_19980001 RAL-832 1212 chr3L 20055086 20055124 chr3L 20055463 20055487 9 370 1.0 2.0 1.5 3.6 401 chr3L 20055086 intergenic not near genes chr3L 20055286 intergenic not near genes chr3L 20055487 intergenic not near genes chr3L_9_20055001 chr3L_20055001 RAL-832 1213 chr3L 20082774 20082788 chr3L 20082891 20082905 4 114 7.0 2.0 4.5 0.7 131 chr3L 20082774 intron sNPF-R - chr3L 20082840 intron sNPF-R - chr3L 20082905 intron sNPF-R - chr3L_4_20080001 chr3L_20080001 RAL-832 1214 chr3L 20113660 20113688 chr3L 20122919 20122950 roo 9 9268 4.5 5.5 5.0 1.5 9290 chr3L 20113660 intergenic not near genes chr3L 20118305 intergenic not near genes chr3L 20122950 intergenic not near genes chr3L_9_20115001 chr3L_20115001 RAL-832 1215 chr3L 20143077 20143111 chr3L 20143168 20143186 15 91 2.5 7.0 4.8 2.6 109 chr3L 20143077 intergenic not near genes chr3L 20143132 intergenic not near genes chr3L 20143186 intergenic not near genes chr3L_15_20140001 chr3L_20140001 RAL-832 1216 chr3L 20150720 20150731 chr3L 20150871 20150877 5 148 5.0 5.5 5.2 0.8 157 chr3L 20150720 3` UTR CG42674 - chr3L 20150798 3` UTR CG42674 - chr3L 20150877 3` UTR CG42674 - chr3L_5_20150001 chr3L_20150001 RAL-832 1217 chr3L 20150732 20150756 chr3L 20150866 20150907 12 142 3.5 4.5 4.0 2.4 175 chr3L 20150732 3` UTR CG42674 - chr3L 20150820 3` UTR CG42674 - chr3L 20150907 3` UTR CG42674 - chr3L_12_20150001 chr3L_20150001 RAL-832 1218 chr3L 20257314 20257359 chr3L 20258453 20258460 pogo 6 1133 1.0 3.5 2.2 1.9 1146 chr3L 20257314 intron rdgC + chr3L 20257887 intron rdgC + chr3L 20258460 intron rdgC + chr3L_6_20255001 chr3L_20255001 RAL-832 1219 chr3L 20283663 20283672 chr3L 20283767 20283776 5 104 4.5 4.0 4.2 1.0 113 chr3L 20283663 intron gogo - chr3L 20283720 intron gogo - chr3L 20283776 intron gogo - chr3L_5_20280001 chr3L_20280001 RAL-832 1220 chr3L 20283673 20283704 chr3L 20283762 20283808 13 92 2.0 3.0 2.5 3.7 135 chr3L 20283673 intron gogo - chr3L 20283740 intron gogo - chr3L 20283808 intron gogo - chr3L_13_20280001 chr3L_20280001 RAL-832 1221 chr3L 20345586 20345638 chr3L 20345687 20345725 7 92 4.0 4.0 4.0 1.4 139 chr3L 20345586 intergenic Rbbp5 - chr3L 20345656 intergenic Rbbp5 - chr3L 20345725 intergenic Rbbp5 - chr3L_7_20345001 chr3L_20345001 RAL-832 1222 chr3L 20386926 20386971 chr3L 20387040 20387079 12 116 1.0 0.5 0.8 6.7 153 chr3L 20386926 intron fbl + chr3L 20387002 intron fbl + chr3L 20387079 intron fbl + chr3L_12_20385001 chr3L_20385001 RAL-832 1223 chr3L 20441049 20441064 chr3L 20441129 20441166 8 94 1.5 2.0 1.8 2.9 117 chr3L 20441049 intergenic CR43943 + chr3L 20441108 intergenic not near genes chr3L 20441166 intergenic not near genes chr3L_8_20440001 chr3L_20440001 RAL-832 1224 chr3L 20462567 20462604 chr3L 20462668 20462705 6 100 5.5 4.0 4.8 1.0 138 chr3L 20462567 intron atk - chr3L 20462636 intron atk - chr3L 20462705 intron atk - chr3L_6_20460001 chr3L_20460001 RAL-832 1225 chr3L 20476737 20476769 chr3L 20484356 20484388 springer 10 7616 7.5 3.5 5.5 1.5 7651 chr3L 20476737 3` UTR isoQC + chr3L 20480562 intergenic not near genes chr3L 20484388 3` UTR ZnT77C - chr3L_10_20480001 chr3L_20480001 RAL-832 1226 chr3L 20525228 20525229 chr3L 24821492 24821494 6 4296265 9.5 3.0 6.2 0.8 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_6_22670001 chr3L_22670001 RAL-832 1227 chr3L 20691880 20691918 chr3L 20692030 20692068 7 147 5.0 4.5 4.8 1.2 188 chr3L 20691880 intergenic kni - chr3L 20691974 intergenic kni - chr3L 20692068 intergenic kni - chr3L_7_20690001 chr3L_20690001 RAL-832 1228 chr3L 20710771 20710792 chr3L 20710854 20710879 8 84 3.0 2.0 2.5 2.3 108 chr3L 20710771 intergenic not near genes chr3L 20710825 intergenic not near genes chr3L 20710879 intergenic not near genes chr3L_8_20710001 chr3L_20710001 RAL-832 1229 chr3L 20729469 20729492 chr3L 20729573 20729596 7 97 6.5 3.0 4.8 1.2 127 chr3L 20729469 3` UTR CR43945 - chr3L 20729532 3` UTR CR43945 - chr3L 20729596 3` UTR CR43945 - chr3L_7_20725001 chr3L_20725001 RAL-832 1230 chr3L 20729497 20729518 chr3L 20729570 20729622 12 89 2.5 3.0 2.8 3.2 125 chr3L 20729497 3` UTR CR43945 - chr3L 20729560 3` UTR CR43945 - chr3L 20729622 3` UTR CR43945 - chr3L_12_20725001 chr3L_20725001 RAL-832 1231 chr3L 20739477 20739524 chr3L 20739612 20739659 9 133 3.5 2.5 3.0 2.2 182 chr3L 20739477 intron CG13252 + chr3L 20739568 intron CG13252 + chr3L 20739659 intron CG13252 + chr3L_9_20735001 chr3L_20735001 RAL-832 1232 chr3L 20762792 20762820 chr3L 20762891 20762911 10 103 4.0 5.0 4.5 1.8 119 chr3L 20762792 intergenic not near genes chr3L 20762852 intergenic not near genes chr3L 20762911 intergenic not near genes chr3L_10_20760001 chr3L_20760001 RAL-832 1233 chr3L 20819621 20819656 chr3L 20819849 20819899 12 238 1.5 3.0 2.2 3.8 278 chr3L 20819621 intron Pka-R1 + chr3L 20819760 intron Pka-R1 + chr3L 20819899 intron Pka-R1 + chr3L_12_20815001 chr3L_20815001 RAL-832 1234 chr3L 20849251 20849292 chr3L 20849349 20849391 10 96 4.0 3.0 3.5 2.2 140 chr3L 20849251 intron CG32432 - chr3L 20849321 intron CG32432 - chr3L 20849391 intron CG32432 - chr3L_10_20845001 chr3L_20845001 RAL-832 1235 chr3L 20866505 20866540 chr3L 20866592 20866597 8 93 2.0 7.0 4.5 1.5 92 chr3L 20866505 intron CG32432 - chr3L 20866551 intron CG32432 - chr3L 20866597 intron CG32432 - chr3L_8_20865001 chr3L_20865001 RAL-832 1236 chr3L 20886762 20886814 chr3L 20886903 20886949 9 133 2.0 0.0 1.0 4.5 187 chr3L 20886762 intergenic CR44686 - chr3L 20886856 intergenic CR44686 - chr3L 20886949 intergenic CR44686 - chr3L_9_20885001 chr3L_20885001 RAL-832 1237 chr3L 21057122 21057160 chr3L 21057357 21057396 16 233 0.0 4.0 2.0 5.3 274 chr3L 21057122 intron siz + chr3L 21057259 intron siz + chr3L 21057396 intron siz + chr3L_16_21055001 chr3L_21055001 RAL-832 1238 chr3L 21071307 21071340 chr3L 21071477 21071522 8 172 8.5 8.5 8.5 0.8 215 chr3L 21071307 intron siz + chr3L 21071414 intron siz + chr3L 21071522 intron siz + chr3L_8_21070001 chr3L_21070001 RAL-832 1239 chr3L 21151847 21151895 chr3L 21156951 21156979 flea 12 5101 0.5 5.0 2.8 3.2 5132 chr3L 21151847 intron Ac78C - chr3L 21154413 intron Ac78C - chr3L 21156979 intron Ac78C - chr3L_12_21150001 chr3L_21150001 RAL-832 1240 chr3L 21306138 21306161 chr3L 21315317 21315329 roo 7 9177 4.0 1.5 2.8 1.8 9191 chr3L 21306138 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310734 intron Pc - chr3L 21315329 3` UTR Pc - chr3L_7_21310001 chr3L_21310001 RAL-832 1241 chr3L 21319530 21319558 chr3L 21319620 21319657 10 97 3.0 6.0 4.5 1.8 127 chr3L 21319530 5` UTR Rab26 + chr3L 21319594 5` UTR Rab26 + chr3L 21319657 5` UTR Rab26 + chr3L_10_21315001 chr3L_21315001 RAL-832 1242 chr3L 21406988 21407016 chr3L 21407081 21407090 5 85 3.5 2.5 3.0 1.2 102 chr3L 21406988 intron rgn + chr3L 21407039 intron rgn + chr3L 21407090 intron rgn + chr3L_5_21405001 chr3L_21405001 RAL-832 1243 chr3L 21458321 21458348 chr3L 21458436 21458453 INE-1 5 104 9.0 1.5 5.2 0.8 132 chr3L 21458321 intergenic not near genes chr3L 21458387 intergenic not near genes chr3L 21458453 intergenic not near genes chr3L_5_21455001 chr3L_21455001 RAL-832 1244 chr3L 21776662 21776696 chr3L 21776769 21776803 5 104 1.0 2.0 1.5 2.0 141 chr3L 21776662 intron,intron CG42689 +,CG42552 + chr3L 21776732 intron,intron CG42689 +,CG42552 + chr3L 21776803 intron,intron CG42689 +,CG42552 + chr3L_5_21775001 chr3L_21775001 RAL-832 1245 chr3L 21794269 21794300 chr3L 21794399 21794412 5 127 4.5 4.0 4.2 1.0 143 chr3L 21794269 intergenic not near genes chr3L 21794340 intergenic not near genes chr3L 21794412 intergenic not near genes chr3L_5_21790001 chr3L_21790001 RAL-832 1246 chr3L 21799927 21799932 chr3L 21800027 21800036 4 102 9.5 0.0 4.8 0.7 109 chr3L 21799927 intergenic not near genes chr3L 21799982 intergenic not near genes chr3L 21800036 intergenic not near genes chr3L_4_21795001 chr3L_21795001 RAL-832 1247 chr3L 21799933 21799966 chr3L 21800023 21800055 7 91 5.5 0.0 2.8 1.8 122 chr3L 21799933 intergenic not near genes chr3L 21799994 intergenic not near genes chr3L 21800055 intergenic not near genes chr3L_7_21795001 chr3L_21795001 RAL-832 1248 chr3L 21824488 21824528 chr3L 21824602 21824637 4 109 5.5 5.5 5.5 0.6 149 chr3L 21824488 3` UTR CG7407 + chr3L 21824562 3` UTR CG7407 + chr3L 21824637 intergenic CG7407 +,CG7414 + chr3L_4_21820001 chr3L_21820001 RAL-832 1249 chr3L 21836713 21836724 chr3L 21836819 21836828 4 104 11.0 6.0 8.5 0.4 115 chr3L 21836713 3` UTR P5CDh1 - chr3L 21836770 3` UTR P5CDh1 - chr3L 21836828 3` UTR P5CDh1 - chr3L_4_21835001 chr3L_21835001 RAL-832 1250 chr3L 21836734 21836760 chr3L 21836818 21836851 7 93 4.0 6.0 5.0 1.2 117 chr3L 21836734 3` UTR P5CDh1 - chr3L 21836792 3` UTR P5CDh1 - chr3L 21836851 3` UTR P5CDh1 - chr3L_7_21835001 chr3L_21835001 RAL-832 1251 chr3L 21849478 21849533 chr3L 21849580 21849635 14 95 2.0 4.0 3.0 3.5 157 chr3L 21849478 intron mub + chr3L 21849556 intron mub + chr3L 21849635 intron mub + chr3L_14_21845001 chr3L_21845001 RAL-832 1252 chr3L 21876919 21876964 chr3L 21877032 21877042 15 105 2.0 2.5 2.2 4.7 123 chr3L 21876919 intron mub + chr3L 21876980 intron mub + chr3L 21877042 intron mub + chr3L_15_21875001 chr3L_21875001 RAL-832 1253 chr3L 21891145 21891154 chr3L 21891261 21891261 4 120 4.0 2.5 3.2 1.0 116 chr3L 21891145 intron mub + chr3L 21891203 intron mub + chr3L 21891261 intron mub + chr3L_4_21890001 chr3L_21890001 RAL-832 1254 chr3L 21891159 21891180 chr3L 21891256 21891309 12 118 2.0 2.0 2.0 4.0 150 chr3L 21891159 intron mub + chr3L 21891234 intron mub + chr3L 21891309 intron mub + chr3L_12_21890001 chr3L_21890001 RAL-832 1255 chr3L 22033686 22033701 chr3L 22033774 22033792 6 93 6.0 2.5 4.2 1.2 106 chr3L 22033686 intergenic not near genes chr3L 22033739 intergenic not near genes chr3L 22033792 intergenic not near genes chr3L_6_22030001 chr3L_22030001 RAL-832 1256 chr3L 22033706 22033723 chr3L 22033772 22033821 7 86 5.0 2.0 3.5 1.6 115 chr3L 22033706 intergenic not near genes chr3L 22033764 intergenic not near genes chr3L 22033821 intergenic not near genes chr3L_7_22030001 chr3L_22030001 RAL-832 1257 chr3L 22099658 22099676 chr3L 22105864 22105872 3S18 6 6202 7.5 7.0 7.2 0.7 6214 chr3L 22099658 intergenic not near genes chr3L 22102765 intergenic not near genes chr3L 22105872 intergenic not near genes chr3L_6_22100001 chr3L_22100001 RAL-832 1258 chr3L 22099678 22099699 chr3L 22105862 22105905 3S18 10 6193 6.0 6.5 6.2 1.4 6227 chr3L 22099678 intergenic not near genes chr3L 22102792 intergenic not near genes chr3L 22105905 intergenic not near genes chr3L_10_22100001 chr3L_22100001 RAL-832 1259 chr3L 22130482 22130517 chr3L 22130648 22130683 8 165 4.5 2.5 3.5 1.8 201 chr3L 22130482 intergenic not near genes chr3L 22130582 intergenic not near genes chr3L 22130683 intergenic not near genes chr3L_8_22130001 chr3L_22130001 RAL-832 1260 chr3L 22255904 22255935 chr3L 22255978 22256017 8 82 2.5 3.5 3.0 2.0 113 chr3L 22255904 intergenic not near genes chr3L 22255960 intergenic not near genes chr3L 22256017 intergenic not near genes chr3L_8_22255001 chr3L_22255001 RAL-832 1261 chr3L 22366704 22366742 chr3L 22366787 22366840 10 92 3.0 2.0 2.5 2.9 136 chr3L 22366704 intron Ten-m - chr3L 22366772 intron Ten-m - chr3L 22366840 intron Ten-m - chr3L_10_22365001 chr3L_22365001 RAL-832 1262 chr3L 22414809 22414815 chr3L 22415257 22415262 4 445 11.0 5.0 8.0 0.4 453 chr3L 22414809 intergenic not near genes chr3L 22415036 intergenic not near genes chr3L 22415262 intergenic not near genes chr3L_4_22415001 chr3L_22415001 RAL-832 1263 chr3L 22414822 22414828 chr3L 22415255 22415269 4 439 8.0 5.0 6.5 0.5 447 chr3L 22414822 intergenic not near genes chr3L 22415046 intergenic not near genes chr3L 22415269 intergenic not near genes chr3L_4_22415001 chr3L_22415001 RAL-832 1264 chr3L 22475968 22476004 chr3L 22476318 22476360 12 352 4.5 1.0 2.8 3.2 392 chr3L 22475968 intergenic CG11425 + chr3L 22476164 intergenic CG11425 + chr3L 22476360 intergenic not near genes chr3L_12_22475001 chr3L_22475001 RAL-832 1265 chr3L 22555760 22555799 chr3L 22563238 22563269 blood 4 7481 1.0 0.5 0.8 2.2 7509 chr3L 22555760 intergenic not near genes chr3L 22559514 intergenic not near genes chr3L 22563269 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-832 1266 chr3L 22617169 22617215 chr3L 22624641 22624687 blood 11 7467 4.0 5.0 4.5 2.0 7518 chr3L 22617169 intron CG14459 - chr3L 22620928 intron CG14459 - chr3L 22624687 intron CG14459 - chr3L_11_22620001 chr3L_22620001 RAL-832 1267 chr3L 22761387 22761422 chr3L 22766824 22766834 Ivk 11 5443 2.0 5.5 3.8 2.3 5447 chr3L 22761387 intron SPoCk + chr3L 22764110 intron SPoCk + chr3L 22766834 intron SPoCk + chr3L_11_22760001 chr3L_22760001 RAL-832 1268 chr3L 22838588 22838619 chr3L 22838674 22838685 5 84 1.5 2.0 1.8 1.8 97 chr3L 22838588 intergenic CG11226 + chr3L 22838636 intergenic CG11226 + chr3L 22838685 intergenic not near genes chr3L_5_22835001 chr3L_22835001 RAL-832 1269 chr3L 22865980 22866005 chr3L 22867114 22867148 Doc 8 1144 5.5 4.0 4.8 1.4 1168 chr3L 22865980 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867148 intron CG33170 + chr3L_8_22865001 chr3L_22865001 RAL-832 1270 chr3L 20525228 20525230 chr3L 22908066 22908066 4 2382837 9.0 22.0 15.5 0.2 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-832 1271 chr3L 22908067 22908067 chr3L 24821492 24821494 4 1913426 18.5 3.0 10.8 0.3 1913427 chr3L 22908067 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_4_23860001 chr3L_23860001 RAL-832 1272 chr3L 22921367 22921401 chr3L 22921453 22921486 5 89 2.0 4.0 3.0 1.2 119 chr3L 22921367 intron CG12768 + chr3L 22921426 intron CG12768 + chr3L 22921486 intron CG12768 + chr3L_5_22920001 chr3L_22920001 RAL-832 1273 chr3L 22989841 22989889 chr3L 22996835 22996883 297 10 6990 3.0 1.0 2.0 3.3 7042 chr3L 22989841 intergenic not near genes chr3L 22993362 intergenic not near genes chr3L 22996883 intergenic not near genes chr3L_10_22990001 chr3L_22990001 RAL-832 1274 chr3L 24012397 24012429 chr3L 24020750 24020790 roo 8 8353 2.5 1.5 2.0 2.7 8393 chr3L 24012397 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020790 intergenic not near genes chr3L_8_24015001 chr3L_24015001 RAL-832 1275 chr3L 24791875 24791920 chr3L 24796674 24796681 Doc 10 4792 5.0 2.5 3.8 2.1 4806 chr3L 24791875 intergenic not near genes chr3L 24794278 intergenic not near genes chr3L 24796681 intergenic not near genes chr3L_10_24790001 chr3L_24790001 RAL-832 1276 chr3L 25628513 25628519 chr3L 25633279 25633285 F-element 6 4778 3.0 2.5 2.8 1.6 4772 chr3L 25628513 intron CG41343 - chr3L 25630899 intron CG41343 - chr3L 25633285 intron CG41343 - chr3L_6_25630001 chr3L_25630001 RAL-832 1277 chr3L 25842485 25842496 chr3L 25842572 25842592 4 94 1.5 3.5 2.5 1.1 107 chr3L 25842485 intron CG40178 - chr3L 25842538 intron CG40178 - chr3L 25842592 intron CG40178 - chr3L_4_25840001 chr3L_25840001 RAL-832 1278 chr3L 26009451 26009455 chr3L 26009515 26009517 4 80 1.5 0.5 1.0 2.0 66 chr3L 26009451 intron CG40178 - chr3L 26009484 intron CG40178 - chr3L 26009517 intron CG40178 - chr3L_4_26005001 chr3L_26005001 RAL-832 1279 chr3L 26694907 26694955 chr3L 26695007 26695055 6 97 1.0 0.5 0.8 3.3 148 chr3L 26694907 intergenic not near genes chr3L 26694981 intergenic not near genes chr3L 26695055 intergenic not near genes chr3L_6_26690001 chr3L_26690001 RAL-832 1280 chr3L 27383187 27383208 chr3L 27383352 27383373 4 165 32.5 20.0 26.2 0.1 186 chr3L 27383187 intron Dbp80 + chr3L 27383280 intron Dbp80 + chr3L 27383373 intron Dbp80 + chr3L_4_27380001 chr3L_27380001 RAL-832 1281 chr3L 27980677 27980731 chr3L 27985495 27985534 Doc 5 4811 2.0 2.5 2.2 1.6 4857 chr3L 27980677 intron CG17514 - chr3L 27983106 intron CG17514 - chr3L 27985534 intron CG17514 - chr3L_5_27980001 chr3L_27980001 RAL-832 1282 chr3R 1443409 1443446 chr3R 1443505 1443522 6 83 1.0 0.5 0.8 3.3 113 chr3R 1443409 intron CG40155 + chr3R 1443466 intron CG40155 + chr3R 1443522 intron CG40155 + chr3R_6_1440001 chr3R_1440001 RAL-832 1283 chr3R 1939030 1939081 chr3R 1939144 1939195 8 111 2.5 2.5 2.5 2.3 165 chr3R 1939030 intergenic not near genes chr3R 1939112 intergenic not near genes chr3R 1939195 intergenic not near genes chr3R_8_1935001 chr3R_1935001 RAL-832 1284 chr3R 2424350 2424351 chr3R 21265634 21265642 BS 4 18841294 10.0 8.0 9.0 0.4 18841292 chr3R 2424350 intergenic not near genes chr3R 11844996 intron CG6959 - chr3R 21265642 intergenic Rab1 - chr3R_4_11840001 chr3R_11840001 RAL-832 1285 chr3R 3580995 3581023 chr3R 3581241 3581270 9 247 2.0 2.5 2.2 2.8 275 chr3R 3580995 intron Parp - chr3R 3581132 intron Parp - chr3R 3581270 intron Parp - chr3R_9_3580001 chr3R_3580001 RAL-832 1286 chr3R 3916201 3916208 chr3R 3916328 3916335 4 127 27.5 21.0 24.2 0.2 134 chr3R 3916201 intergenic not near genes chr3R 3916268 intergenic not near genes chr3R 3916335 intergenic not near genes chr3R_4_3915001 chr3R_3915001 RAL-832 1287 chr3R 4105022 4105071 chr3R 4110246 4110270 copia 7 5216 3.0 3.0 3.0 1.8 5248 chr3R 4105022 intergenic not near genes chr3R 4107646 intergenic not near genes chr3R 4110270 intergenic not near genes chr3R_7_4105001 chr3R_4105001 RAL-832 1288 chr3R 4132880 4132930 chr3R 4133054 4133098 17 172 3.5 0.5 2.0 5.7 218 chr3R 4132880 intron Gfat1 + chr3R 4132989 intron Gfat1 + chr3R 4133098 intron Gfat1 + chr3R_17_4130001 chr3R_4130001 RAL-832 1289 chr3R 4206049 4206101 chr3R 4211644 4211646 mdg3 12 5583 4.5 4.5 4.5 2.2 5597 chr3R 4206049 intron CG14636 - chr3R 4208848 intron CG14636 - chr3R 4211646 intron CG14636 - chr3R_12_4205001 chr3R_4205001 RAL-832 1290 chr3R 4366755 4366789 chr3R 4375138 4375190 roo 14 8391 6.0 7.5 6.8 1.8 8435 chr3R 4366755 3` UTR CG1090 + chr3R 4370972 intergenic not near genes chr3R 4375190 5` UTR CR44922 + chr3R_14_4370001 chr3R_4370001 RAL-832 1291 chr3R 4408403 4408439 chr3R 4412719 4412763 Juan 10 4318 9.0 7.0 8.0 1.1 4360 chr3R 4408403 intron CG32944 - chr3R 4410583 intron CG32944 - chr3R 4412763 intron CG32944 - chr3R_10_4410001 chr3R_4410001 RAL-832 1292 chr3R 4609531 4609581 chr3R 4610715 4610745 1360 12 1171 2.0 6.0 4.0 2.4 1214 chr3R 4609531 intergenic not near genes chr3R 4610138 intergenic not near genes chr3R 4610745 intergenic not near genes chr3R_12_4610001 chr3R_4610001 RAL-832 1293 chr3R 4636583 4636627 chr3R 4637021 4637067 INE-1 14 436 3.5 2.5 3.0 3.5 484 chr3R 4636583 intergenic not near genes chr3R 4636825 intergenic not near genes chr3R 4637067 intergenic not near genes chr3R_14_4635001 chr3R_4635001 RAL-832 1294 chr3R 4678452 4678483 chr3R 4678823 4678854 8 365 3.5 3.0 3.2 1.9 402 chr3R 4678452 intron CG43427 + chr3R 4678653 intron CG43427 + chr3R 4678854 intron CG43427 + chr3R_8_4675001 chr3R_4675001 RAL-832 1295 chr3R 4753224 4753266 chr3R 4757547 4757559 F-element 5 4313 4.5 3.0 3.8 1.0 4335 chr3R 4753224 intron,intron atms +,CG44098 - chr3R 4755392 intron,intron atms +,CG44098 - chr3R 4757559 intron,exon atms +,CG44098 - chr3R_5_4755001 chr3R_4755001 RAL-832 1296 chr3R 4759723 4759748 chr3R 4761239 4761244 hopper2 4 1511 2.5 10.5 6.5 0.5 1521 chr3R 4759723 intron,intron atms +,CG44098 - chr3R 4760484 intron,intron atms +,CG44098 - chr3R 4761244 intron,intron atms +,CG44098 - chr3R_4_4760001 chr3R_4760001 RAL-832 1297 chr3R 4769142 4769178 chr3R 4769239 4769272 9 93 2.5 2.0 2.2 2.8 130 chr3R 4769142 intron,intron atms +,CG44098 - chr3R 4769207 intron,intron atms +,CG44098 - chr3R 4769272 intron,intron atms +,CG44098 - chr3R_9_4765001 chr3R_4765001 RAL-832 1298 chr3R 4896274 4896300 chr3R 4896387 4896413 7 113 4.0 0.5 2.2 2.2 139 chr3R 4896274 intergenic CR45580 + chr3R 4896344 intergenic CR45580 + chr3R 4896413 intergenic CR45580 + chr3R_7_4895001 chr3R_4895001 RAL-832 1299 chr3R 4942135 4942158 chr3R 4942238 4942250 5 98 3.5 0.0 1.8 1.8 115 chr3R 4942135 intron Cdep + chr3R 4942192 intron Cdep + chr3R 4942250 intron Cdep + chr3R_5_4940001 chr3R_4940001 RAL-832 1300 chr3R 4965987 4966033 chr3R 4966099 4966145 6 105 5.5 0.5 3.0 1.5 158 chr3R 4965987 intron CG1124 + chr3R 4966066 intron CG1124 + chr3R 4966145 intron CG1124 + chr3R_6_4965001 chr3R_4965001 RAL-832 1301 chr3R 5045832 5045878 chr3R 5052954 5052984 HMS-Beagle 7 7117 2.5 4.5 3.5 1.6 7152 chr3R 5045832 intron CR43635 - chr3R 5049408 intergenic not near genes chr3R 5052984 intergenic CR45588 - chr3R_7_5045001 chr3R_5045001 RAL-832 1302 chr3R 5067960 5068013 chr3R 5073497 5073550 mdg3 17 5531 4.0 3.0 3.5 3.8 5590 chr3R 5067960 intergenic not near genes chr3R 5070755 intergenic not near genes chr3R 5073550 intergenic not near genes chr3R_17_5070001 chr3R_5070001 RAL-832 1303 chr3R 5161937 5161969 chr3R 5162033 5162074 7 96 3.5 0.0 1.8 2.5 137 chr3R 5161937 intron dpr16 + chr3R 5162006 intron dpr16 + chr3R 5162074 intron dpr16 + chr3R_7_5160001 chr3R_5160001 RAL-832 1304 chr3R 5170262 5170297 chr3R 5170383 5170397 8 116 6.0 0.0 3.0 2.0 135 chr3R 5170262 intergenic dpr16 + chr3R 5170330 intergenic dpr16 + chr3R 5170397 intergenic dpr16 + chr3R_8_5170001 chr3R_5170001 RAL-832 1305 chr3R 5318763 5318778 chr3R 5318823 5318861 4 82 0.5 2.5 1.5 1.6 98 chr3R 5318763 intron mtd - chr3R 5318812 intron mtd - chr3R 5318861 intron mtd - chr3R_4_5315001 chr3R_5315001 RAL-832 1306 chr3R 5338388 5338423 chr3R 5343583 5343605 Rt1c 6 5192 3.0 3.5 3.2 1.4 5217 chr3R 5338388 intron mtd - chr3R 5340996 intron mtd - chr3R 5343605 intron mtd - chr3R_6_5340001 chr3R_5340001 RAL-832 1307 chr3R 5445948 5445975 chr3R 5452428 5452455 Burdock 7 6477 7.0 4.0 5.5 1.1 6507 chr3R 5445948 intron CG14669 + chr3R 5449202 intron CG14669 + chr3R 5452455 intron CG14669 + chr3R_7_5445001 chr3R_5445001 RAL-832 1308 chr3R 5445979 5445992 chr3R 5452423 5452432 Burdock 4 6453 4.5 3.5 4.0 0.8 6453 chr3R 5445979 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452432 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-832 1309 chr3R 5626485 5626491 chr3R 5626547 5626568 4 68 2.5 1.0 1.8 1.4 83 chr3R 5626485 intergenic not near genes chr3R 5626526 intergenic not near genes chr3R 5626568 intergenic not near genes chr3R_4_5625001 chr3R_5625001 RAL-832 1310 chr3R 5626992 5627041 chr3R 5627128 5627169 11 130 2.5 3.0 2.8 2.9 177 chr3R 5626992 intergenic not near genes chr3R 5627080 intergenic not near genes chr3R 5627169 intergenic not near genes chr3R_11_5625001 chr3R_5625001 RAL-832 1311 chr3R 5698091 5698113 chr3R 5698205 5698222 8 112 11.5 5.0 8.2 0.9 131 chr3R 5698091 intron plx + chr3R 5698156 intron plx + chr3R 5698222 intron plx + chr3R_8_5695001 chr3R_5695001 RAL-832 1312 chr3R 5698120 5698142 chr3R 5698204 5698257 5 99 6.5 4.5 5.5 0.8 137 chr3R 5698120 intron plx + chr3R 5698188 intron plx + chr3R 5698257 intron plx + chr3R_5_5695001 chr3R_5695001 RAL-832 1313 chr3R 5746009 5746042 chr3R 5746270 5746298 pogo 10 254 1.5 7.0 4.2 1.9 289 chr3R 5746009 3` UTR Madm + chr3R 5746154 3` UTR Madm + chr3R 5746298 3` UTR Madm + chr3R_10_5745001 chr3R_5745001 RAL-832 1314 chr3R 5747000 5747014 chr3R 5753211 5753223 diver 4 6210 7.0 5.5 6.2 0.6 6223 chr3R 5747000 intergenic Madm + chr3R 5750112 intergenic not near genes chr3R 5753223 intergenic CG2091 - chr3R_4_5750001 chr3R_5750001 RAL-832 1315 chr3R 5747023 5747043 chr3R 5753208 5753254 diver 9 6201 3.5 5.0 4.2 1.7 6231 chr3R 5747023 intergenic Madm + chr3R 5750138 intergenic not near genes chr3R 5753254 intergenic CG2091 - chr3R_9_5750001 chr3R_5750001 RAL-832 1316 chr3R 5809112 5809142 chr3R 5809355 5809402 pogo 6 250 0.5 4.0 2.2 1.9 290 chr3R 5809112 3` UTR CG11000 + chr3R 5809257 3` UTR CG11000 + chr3R 5809402 3` UTR CG11000 + chr3R_6_5805001 chr3R_5805001 RAL-832 1317 chr3R 5822370 5822401 chr3R 5823547 5823588 1360 7 1186 3.0 3.0 3.0 1.8 1218 chr3R 5822370 3` UTR CG2023 - chr3R 5822979 3` UTR CG2023 - chr3R 5823588 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 RAL-832 1318 chr3R 5861560 5861590 chr3R 5861659 5861670 8 96 3.5 1.5 2.5 2.3 110 chr3R 5861560 intron CG2017 - chr3R 5861615 intron CG2017 - chr3R 5861670 intron CG2017 - chr3R_8_5860001 chr3R_5860001 RAL-832 1319 chr3R 5872968 5872984 chr3R 5873206 5873216 4 236 8.5 4.5 6.5 0.5 248 chr3R 5872968 intron CG34113 - chr3R 5873092 intron CG34113 - chr3R 5873216 intron CG34113 - chr3R_4_5870001 chr3R_5870001 RAL-832 1320 chr3R 5927555 5927586 chr3R 5927804 5927825 pogo 6 246 1.0 3.5 2.2 1.9 270 chr3R 5927555 intron CG34113 - chr3R 5927690 intron CG34113 - chr3R 5927825 intron CG34113 - chr3R_6_5925001 chr3R_5925001 RAL-832 1321 chr3R 5954324 5954356 chr3R 5954404 5954442 10 84 2.0 3.5 2.8 2.6 118 chr3R 5954324 intron CG34113 - chr3R 5954383 intron CG34113 - chr3R 5954442 intron CG34113 - chr3R_10_5950001 chr3R_5950001 RAL-832 1322 chr3R 5988941 5988973 chr3R 5989031 5989075 8 97 0.5 1.0 0.8 4.4 134 chr3R 5988941 intergenic CR44927 + chr3R 5989008 intergenic CR44927 + chr3R 5989075 intergenic CR44927 + chr3R_8_5985001 chr3R_5985001 RAL-832 1323 chr3R 6009492 6009522 chr3R 6009625 6009657 7 139 7.0 5.5 6.2 1.0 165 chr3R 6009492 intergenic not near genes chr3R 6009574 intergenic not near genes chr3R 6009657 intergenic not near genes chr3R_7_6005001 chr3R_6005001 RAL-832 1324 chr3R 6010135 6010165 chr3R 6010232 6010282 11 111 2.5 3.5 3.0 2.8 147 chr3R 6010135 intergenic CG10280 - chr3R 6010208 intergenic CG10280 - chr3R 6010282 intergenic CG10280 - chr3R_11_6010001 chr3R_6010001 RAL-832 1325 chr3R 6121165 6121176 chr3R 6121377 6121396 BS 5 225 0.0 6.5 3.2 1.2 231 chr3R 6121165 intergenic not near genes chr3R 6121280 intergenic not near genes chr3R 6121396 intergenic not near genes chr3R_5_6120001 chr3R_6120001 RAL-832 1326 chr3R 6175156 6175205 chr3R 6182447 6182487 HMS-Beagle2 10 7285 2.0 1.0 1.5 4.0 7331 chr3R 6175156 intergenic Osi1 + chr3R 6178822 intron CR45194 + chr3R 6182487 intergenic CR45194 + chr3R_10_6175001 chr3R_6175001 RAL-832 1327 chr3R 6191181 6191198 chr3R 6191248 6191297 8 89 2.5 6.0 4.2 1.5 116 chr3R 6191181 intron NPFR + chr3R 6191239 intron NPFR + chr3R 6191297 intron NPFR + chr3R_8_6190001 chr3R_6190001 RAL-832 1328 chr3R 6203959 6204001 chr3R 6204111 6204146 7 149 1.0 8.0 4.5 1.3 187 chr3R 6203959 intron Osi24 + chr3R 6204052 intron Osi24 + chr3R 6204146 intron Osi24 + chr3R_7_6200001 chr3R_6200001 RAL-832 1329 chr3R 6206298 6206307 chr3R 6206512 6206522 BS 4 226 2.5 2.5 2.5 1.1 224 chr3R 6206298 exon Osi24 + chr3R 6206410 intron Osi24 + chr3R 6206522 intron Osi24 + chr3R_4_6205001 chr3R_6205001 RAL-832 1330 chr3R 6461584 6461612 chr3R 6461683 6461712 6 97 4.5 6.5 5.5 0.9 128 chr3R 6461584 intergenic not near genes chr3R 6461648 intergenic not near genes chr3R 6461712 intergenic not near genes chr3R_6_6460001 chr3R_6460001 RAL-832 1331 chr3R 6510023 6510054 chr3R 6515109 6515155 jockey 7 5097 7.5 6.5 7.0 0.9 5132 chr3R 6510023 intergenic not near genes chr3R 6512589 intergenic not near genes chr3R 6515155 intergenic not near genes chr3R_7_6510001 chr3R_6510001 RAL-832 1332 chr3R 6571719 6571754 chr3R 6571812 6571846 7 88 0.5 1.5 1.0 3.5 127 chr3R 6571719 intron dpr11 - chr3R 6571782 intron dpr11 - chr3R 6571846 intron dpr11 - chr3R_7_6570001 chr3R_6570001 RAL-832 1333 chr3R 6737502 6737526 chr3R 6739293 6739328 Doc 6 1798 0.0 1.5 0.8 3.3 1826 chr3R 6737502 intron pb - chr3R 6738415 intron pb - chr3R 6739328 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-832 1334 chr3R 6784148 6784154 chr3R 6784321 6784334 4 176 4.5 6.5 5.5 0.6 186 chr3R 6784148 intergenic not near genes chr3R 6784241 intergenic not near genes chr3R 6784334 intergenic not near genes chr3R_4_6780001 chr3R_6780001 RAL-832 1335 chr3R 6862224 6862252 chr3R 6862321 6862359 4 100 1.0 5.0 3.0 1.0 135 chr3R 6862224 intergenic not near genes chr3R 6862292 intergenic not near genes chr3R 6862359 intergenic not near genes chr3R_4_6860001 chr3R_6860001 RAL-832 1336 chr3R 6918050 6918093 chr3R 6918148 6918179 10 94 1.5 3.0 2.2 3.1 129 chr3R 6918050 intron Antp - chr3R 6918114 intron Antp - chr3R 6918179 intron Antp - chr3R_10_6915001 chr3R_6915001 RAL-832 1337 chr3R 6923026 6923060 chr3R 6924440 6924474 6 1411 4.0 1.0 2.5 1.7 1448 chr3R 6923026 intron Antp - chr3R 6923750 intron Antp - chr3R 6924474 intron Antp - chr3R_6_6920001 chr3R_6920001 RAL-832 1338 chr3R 6961181 6961199 chr3R 6961273 6961298 4 94 2.5 7.0 4.8 0.7 117 chr3R 6961181 intron Antp - chr3R 6961240 intron Antp - chr3R 6961298 intron Antp - chr3R_4_6960001 chr3R_6960001 RAL-832 1339 chr3R 6978870 6978908 chr3R 6978972 6979013 8 98 6.0 3.5 4.8 1.4 143 chr3R 6978870 intron Antp - chr3R 6978942 intron Antp - chr3R 6979013 intron Antp - chr3R_8_6975001 chr3R_6975001 RAL-832 1340 chr3R 7060247 7060286 chr3R 7060342 7060387 8 96 2.0 2.5 2.2 2.5 140 chr3R 7060247 3` UTR dj + chr3R 7060317 3` UTR dj + chr3R 7060387 3` UTR dj + chr3R_8_7060001 chr3R_7060001 RAL-832 1341 chr3R 7092780 7092815 chr3R 7093364 7093371 8 579 0.5 7.0 3.8 1.7 591 chr3R 7092780 3` UTR CR43685 - chr3R 7093076 intron CR43685 - chr3R 7093371 3` UTR CR43685 - chr3R_8_7090001 chr3R_7090001 RAL-832 1342 chr3R 7094694 7094694 chr3R 7773344 7773344 5 678650 19.5 13.5 16.5 0.3 678650 chr3R 7094694 3` UTR e(y)2b + chr3R 7434019 intergenic not near genes chr3R 7773344 intergenic not near genes chr3R_5_7430001 chr3R_7430001 RAL-832 1343 chr3R 7126484 7126534 chr3R 7126598 7126634 15 109 3.0 2.5 2.8 3.9 150 chr3R 7126484 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126559 3` UTR CG10068 - chr3R 7126634 3` UTR CG10068 - chr3R_15_7125001 chr3R_7125001 RAL-832 1344 chr3R 7173659 7173694 chr3R 7173759 7173789 8 99 5.5 6.0 5.8 1.2 130 chr3R 7173659 intron sas + chr3R 7173724 intron sas + chr3R 7173789 intron sas + chr3R_8_7170001 chr3R_7170001 RAL-832 1345 chr3R 7210606 7210608 chr3R 7210692 7210692 6 90 0.0 8.5 4.2 1.2 86 chr3R 7210606 intergenic not near genes chr3R 7210649 intergenic not near genes chr3R 7210692 intergenic not near genes chr3R_6_7210001 chr3R_7210001 RAL-832 1346 chr3R 7210609 7210618 chr3R 7210690 7210724 6 100 0.0 8.0 4.0 1.2 115 chr3R 7210609 intergenic not near genes chr3R 7210666 intergenic not near genes chr3R 7210724 intergenic not near genes chr3R_6_7210001 chr3R_7210001 RAL-832 1347 chr3R 7217459 7217490 chr3R 7217689 7217709 9 235 3.0 4.0 3.5 2.0 250 chr3R 7217459 intergenic CG14605 -,CG14606 - chr3R 7217584 intergenic CG14605 - chr3R 7217709 3` UTR CG14605 - chr3R_9_7215001 chr3R_7215001 RAL-832 1348 chr3R 7298804 7298822 chr3R 7298906 7298946 5 113 2.5 2.0 2.2 1.6 142 chr3R 7298804 intron rn - chr3R 7298875 intron rn - chr3R 7298946 intron rn - chr3R_5_7295001 chr3R_7295001 RAL-832 1349 chr3R 7332152 7332179 chr3R 7332219 7332248 7 68 0.5 1.0 0.8 3.9 96 chr3R 7332152 intergenic CR44337 + chr3R 7332200 intergenic CR44337 + chr3R 7332248 intergenic CR44337 + chr3R_7_7330001 chr3R_7330001 RAL-832 1350 chr3R 7366188 7366228 chr3R 7366815 7366845 4 623 0.0 1.5 0.8 2.2 657 chr3R 7366188 3` UTR,3` UTR Mst84Da +,MstProx - chr3R 7366516 exon MstProx - chr3R 7366845 exon MstProx - chr3R_4_7365001 chr3R_7365001 RAL-832 1351 chr3R 7415972 7415999 chr3R 7416126 7416150 4 146 2.0 2.5 2.2 1.2 178 chr3R 7415972 intergenic not near genes chr3R 7416061 intergenic not near genes chr3R 7416150 intergenic not near genes chr3R_4_7415001 chr3R_7415001 RAL-832 1352 chr3R 7447982 7448010 chr3R 7448069 7448108 12 96 4.5 7.0 5.8 1.8 126 chr3R 7447982 intergenic not near genes chr3R 7448045 intergenic not near genes chr3R 7448108 intergenic not near genes chr3R_12_7445001 chr3R_7445001 RAL-832 1353 chr3R 7613258 7613306 chr3R 7614500 7614548 10 1238 13.5 23.5 18.5 0.5 1290 chr3R 7613258 intron CG34127 - chr3R 7613903 intron CG34127 - chr3R 7614548 intron CG34127 - chr3R_10_7610001 chr3R_7610001 RAL-832 1354 chr3R 7611763 7611787 chr3R 7615101 7615125 9 3340 25.0 19.0 22.0 0.4 3362 chr3R 7611763 intron CG34127 - chr3R 7613444 intron CG34127 - chr3R 7615125 intron CG34127 - chr3R_9_7610001 chr3R_7610001 RAL-832 1355 chr3R 7654983 7655038 chr3R 7655085 7655136 9 89 2.0 1.5 1.8 3.2 153 chr3R 7654983 intergenic not near genes chr3R 7655060 intergenic not near genes chr3R 7655136 intergenic not near genes chr3R_9_7655001 chr3R_7655001 RAL-832 1356 chr3R 7694565 7694608 chr3R 7713641 7713689 invader3 7 19079 2.0 1.5 1.8 2.5 19124 chr3R 7694565 3` UTR Nlg1 + chr3R 7704127 intergenic not near genes chr3R 7713689 intergenic not near genes chr3R_7_7700001 chr3R_7700001 RAL-832 1357 chr3R 7729466 7729496 chr3R 7737419 7737454 Stalker2 8 7950 3.5 7.0 5.2 1.3 7988 chr3R 7729466 intergenic not near genes chr3R 7733460 intergenic not near genes chr3R 7737454 intergenic not near genes chr3R_8_7730001 chr3R_7730001 RAL-832 1358 chr3R 7773344 7773344 chr3R 13217322 13217324 4 5443978 15.0 9.0 12.0 0.3 5443980 chr3R 7773344 intergenic not near genes chr3R 10495334 intergenic not near genes chr3R 13217324 intergenic not near genes chr3R_4_10495001 chr3R_10495001 RAL-832 1359 chr3R 7773344 7773344 chr3R 30278264 30278265 4 22504920 15.0 8.5 11.8 0.3 22504921 chr3R 7773344 intergenic not near genes chr3R 19025804 exon CG14285 + chr3R 30278265 5` UTR hdc + chr3R_4_19025001 chr3R_19025001 RAL-832 1360 chr3R 7814014 7814064 chr3R 7814194 7814241 11 177 2.5 3.0 2.8 2.9 227 chr3R 7814014 intergenic CG34384 + chr3R 7814128 intergenic CG34384 + chr3R 7814241 intergenic CG34384 + chr3R_11_7810001 chr3R_7810001 RAL-832 1361 chr3R 7849620 7849668 chr3R 7850807 7850839 1360 9 1183 5.5 6.5 6.0 1.3 1219 chr3R 7849620 intron CG34384 + chr3R 7850230 intron CG34384 + chr3R 7850839 intron CG34384 + chr3R_9_7850001 chr3R_7850001 RAL-832 1362 chr3R 7857629 7857674 chr3R 7857726 7857776 8 95 6.0 8.0 7.0 1.0 147 chr3R 7857629 3` UTR CG17816 - chr3R 7857702 3` UTR CG17816 - chr3R 7857776 3` UTR CG17816 - chr3R_8_7855001 chr3R_7855001 RAL-832 1363 chr3R 7773344 7773344 chr3R 7890529 7890535 11 117188 15.0 10.5 12.8 0.8 117191 chr3R 7773344 intergenic not near genes chr3R 7831940 intron CG34384 + chr3R 7890535 intron mRpS9 - chr3R_11_7830001 chr3R_7830001 RAL-832 1364 chr3R 7973301 7973338 chr3R 7974383 7974417 1360 10 1081 2.5 4.5 3.5 2.2 1116 chr3R 7973301 intergenic not near genes chr3R 7973859 intergenic not near genes chr3R 7974417 3` UTR CD98hc - chr3R_10_7970001 chr3R_7970001 RAL-832 1365 chr3R 8040657 8040673 chr3R 8040751 8040777 12 101 0.5 5.5 3.0 3.0 120 chr3R 8040657 intergenic not near genes chr3R 8040717 intergenic not near genes chr3R 8040777 intergenic CG43060 + chr3R_12_8040001 chr3R_8040001 RAL-832 1366 chr3R 8082568 8082587 chr3R 8082665 8082684 5 97 4.0 6.5 5.2 0.8 116 chr3R 8082568 intron mAChR-B + chr3R 8082626 intron mAChR-B + chr3R 8082684 intron mAChR-B + chr3R_5_8080001 chr3R_8080001 RAL-832 1367 chr3R 8101767 8101789 chr3R 8104849 8104871 G2 4 3090 1.0 3.0 2.0 1.3 3104 chr3R 8101767 exon CG7900 + chr3R 8103319 intron CG7900 + chr3R 8104871 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-832 1368 chr3R 8273718 8273769 chr3R 8273825 8273876 14 103 2.5 3.5 3.0 3.5 158 chr3R 8273718 intergenic not near genes chr3R 8273797 intergenic not near genes chr3R 8273876 intergenic not near genes chr3R_14_8270001 chr3R_8270001 RAL-832 1369 chr3R 8310059 8310079 chr3R 8310168 8310218 6 128 1.5 2.0 1.8 2.1 159 chr3R 8310059 5` UTR CG11693 - chr3R 8310138 intron CG11693 - chr3R 8310218 intron CG11693 - chr3R_6_8310001 chr3R_8310001 RAL-832 1370 chr3R 8339247 8339247 chr3R 21907534 21907536 4 13568288 12.0 7.0 9.5 0.4 13568289 chr3R 8339247 intergenic not near genes chr3R 15123392 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-832 1371 chr3R 8375142 8375165 chr3R 8375214 8375269 10 86 3.0 1.5 2.2 3.1 127 chr3R 8375142 intron CG45263 - chr3R 8375206 intron CG45263 - chr3R 8375269 intron CG45263 - chr3R_10_8375001 chr3R_8375001 RAL-832 1372 chr3R 8403015 8403039 chr3R 8412181 8412189 roo 6 9170 0.5 3.5 2.0 2.0 9174 chr3R 8403015 intron CG45263 - chr3R 8407602 intron CG45263 - chr3R 8412189 intron CG45263 - chr3R_6_8405001 chr3R_8405001 RAL-832 1373 chr3R 8570481 8570503 chr3R 8575112 8575114 HMS-Beagle 9 4630 3.5 3.5 3.5 2.0 4633 chr3R 8570481 intergenic not near genes chr3R 8572798 intergenic not near genes chr3R 8575114 intergenic not near genes chr3R_9_8570001 chr3R_8570001 RAL-832 1374 chr3R 8707364 8707380 chr3R 8709794 8709840 jockey 8 2452 1.0 1.5 1.2 3.6 2476 chr3R 8707364 intergenic not near genes chr3R 8708602 intergenic not near genes chr3R 8709840 intergenic not near genes chr3R_8_8705001 chr3R_8705001 RAL-832 1375 chr3R 8740228 8740274 chr3R 8740337 8740373 9 99 1.0 2.0 1.5 3.6 145 chr3R 8740228 intron CG9801 - chr3R 8740300 intron CG9801 - chr3R 8740373 intron CG9801 - chr3R_9_8740001 chr3R_8740001 RAL-832 1376 chr3R 8745727 8745778 chr3R 8745858 8745890 26 124 3.0 6.5 4.8 4.5 163 chr3R 8745727 intron CG9801 - chr3R 8745808 intron CG9801 - chr3R 8745890 intron CG9801 - chr3R_26_8745001 chr3R_8745001 RAL-832 1377 chr3R 8756283 8756317 chr3R 8756365 8756413 17 94 5.0 5.0 5.0 2.8 130 chr3R 8756283 intron,intron CG11768 -,CG34135 - chr3R 8756348 intron,intron CG11768 -,CG34135 - chr3R 8756413 intron,intron CG11768 -,CG34135 - chr3R_17_8755001 chr3R_8755001 RAL-832 1378 chr3R 8894852 8894889 chr3R 8896028 8896055 1360 10 1172 6.0 4.0 5.0 1.7 1203 chr3R 8894852 intron pyd - chr3R 8895454 intron pyd - chr3R 8896055 intron pyd - chr3R_10_8895001 chr3R_8895001 RAL-832 1379 chr3R 8960556 8960603 chr3R 8960653 8960700 8 89 5.0 3.0 4.0 1.6 144 chr3R 8960556 intron CG11966 - chr3R 8960628 intron CG11966 - chr3R 8960700 intron CG11966 - chr3R_8_8960001 chr3R_8960001 RAL-832 1380 chr3R 8997360 8997395 chr3R 8997470 8997504 6 107 2.5 5.5 4.0 1.2 144 chr3R 8997360 intron CG31100 - chr3R 8997432 intron CG31100 - chr3R 8997504 intron CG31100 - chr3R_6_8995001 chr3R_8995001 RAL-832 1381 chr3R 9036359 9036371 chr3R 9036457 9036469 4 98 7.5 5.5 6.5 0.5 110 chr3R 9036359 intron neur - chr3R 9036414 intron neur - chr3R 9036469 intron neur - chr3R_4_9035001 chr3R_9035001 RAL-832 1382 chr3R 9036373 9036398 chr3R 9036456 9036496 11 96 3.5 5.5 4.5 2.0 123 chr3R 9036373 intron neur - chr3R 9036434 intron neur - chr3R 9036496 intron neur - chr3R_11_9035001 chr3R_9035001 RAL-832 1383 chr3R 9083155 9083174 chr3R 9083226 9083279 4 84 1.0 3.0 2.0 1.3 124 chr3R 9083155 intron pum - chr3R 9083217 intron pum - chr3R 9083279 intron pum - chr3R_4_9080001 chr3R_9080001 RAL-832 1384 chr3R 9099449 9099482 chr3R 9099551 9099558 7 96 0.0 5.0 2.5 2.0 109 chr3R 9099449 intron pum - chr3R 9099504 intron pum - chr3R 9099558 intron pum - chr3R_7_9095001 chr3R_9095001 RAL-832 1385 chr3R 9101842 9101867 chr3R 9101936 9101961 5 102 0.5 2.0 1.2 2.3 119 chr3R 9101842 intron pum - chr3R 9101902 intron pum - chr3R 9101961 intron pum - chr3R_5_9100001 chr3R_9100001 RAL-832 1386 chr3R 9108857 9108878 chr3R 9108953 9108974 5 96 6.0 1.0 3.5 1.1 117 chr3R 9108857 intron pum - chr3R 9108916 intron pum - chr3R 9108974 intron pum - chr3R_5_9105001 chr3R_9105001 RAL-832 1387 chr3R 9141148 9141164 chr3R 9141223 9141253 4 83 3.0 5.0 4.0 0.8 105 chr3R 9141148 intron pum - chr3R 9141200 intron pum - chr3R 9141253 intron pum - chr3R_4_9140001 chr3R_9140001 RAL-832 1388 chr3R 9143037 9143053 chr3R 9143181 9143201 5 152 0.5 2.5 1.5 2.0 164 chr3R 9143037 intron pum - chr3R 9143119 intron pum - chr3R 9143201 intron pum - chr3R_5_9140001 chr3R_9140001 RAL-832 1389 chr3R 9149683 9149714 chr3R 9149763 9149813 4 95 2.0 1.0 1.5 1.6 130 chr3R 9149683 intron pum - chr3R 9149748 intron pum - chr3R 9149813 intron pum - chr3R_4_9145001 chr3R_9145001 RAL-832 1390 chr3R 9319561 9319608 chr3R 9320015 9320043 jockey 9 449 4.0 3.0 3.5 2.0 482 chr3R 9319561 intron CG8861 - chr3R 9319802 intron CG8861 - chr3R 9320043 intron CG8861 - chr3R_9_9315001 chr3R_9315001 RAL-832 1391 chr3R 9361804 9361840 chr3R 9362065 9362101 pogo 14 259 3.0 7.0 5.0 2.3 297 chr3R 9361804 3` UTR CG45050 + chr3R 9361952 3` UTR CG45050 + chr3R 9362101 3` UTR CG45050 + chr3R_14_9360001 chr3R_9360001 RAL-832 1392 chr3R 9382798 9382847 chr3R 9382943 9382991 6 142 1.5 2.0 1.8 2.1 193 chr3R 9382798 intron FER - chr3R 9382894 intron FER - chr3R 9382991 intron FER - chr3R_6_9380001 chr3R_9380001 RAL-832 1393 chr3R 9601450 9601493 chr3R 9601588 9601631 11 133 3.5 3.5 3.5 2.4 181 chr3R 9601450 intron CG8312 + chr3R 9601540 intron CG8312 + chr3R 9601631 intron CG8312 + chr3R_11_9600001 chr3R_9600001 RAL-832 1394 chr3R 9644564 9644606 chr3R 9644665 9644676 12 96 3.5 1.5 2.5 3.4 112 chr3R 9644564 intron Dh44 + chr3R 9644620 intron Dh44 + chr3R 9644676 intron Dh44 + chr3R_12_9640001 chr3R_9640001 RAL-832 1395 chr3R 10062245 10062278 chr3R 10062380 10062417 11 141 2.5 6.0 4.2 2.1 172 chr3R 10062245 intergenic CR45205 -,CG33630 + chr3R 10062331 intergenic CG33630 +,CR45205 - chr3R 10062417 intergenic CG33630 +,CR45205 - chr3R_11_10060001 chr3R_10060001 RAL-832 1396 chr3R 10140412 10140464 chr3R 10140522 10140570 13 99 1.0 2.0 1.5 5.2 158 chr3R 10140412 3` UTR TAF1B - chr3R 10140491 3` UTR TAF1B - chr3R 10140570 3` UTR TAF1B - chr3R_13_10140001 chr3R_10140001 RAL-832 1397 chr3R 10183089 10183104 chr3R 10183186 10183201 6 97 2.0 3.5 2.8 1.6 112 chr3R 10183089 intron CG12814 - chr3R 10183145 intron CG12814 - chr3R 10183201 intron CG12814 - chr3R_6_10180001 chr3R_10180001 RAL-832 1398 chr3R 10231762 10231799 chr3R 10237359 10237361 mdg3 9 5589 5.0 3.5 4.2 1.7 5599 chr3R 10231762 intron CG42795 + chr3R 10234562 intron CG42795 + chr3R 10237361 intron CG42795 + chr3R_9_10230001 chr3R_10230001 RAL-832 1399 chr3R 10255361 10255381 chr3R 10260821 10260833 I-element 7 5459 13.0 3.5 8.2 0.8 5472 chr3R 10255361 3` UTR Sirt6 - chr3R 10258097 intron Sirt6 - chr3R 10260833 exon Sirt6 - chr3R_7_10255001 chr3R_10255001 RAL-832 1400 chr3R 10395641 10395688 chr3R 10395742 10395774 10 94 1.5 5.0 3.2 2.4 133 chr3R 10395641 intron cwo + chr3R 10395708 intron cwo + chr3R 10395774 intron cwo + chr3R_10_10395001 chr3R_10395001 RAL-832 1401 chr3R 10403030 10403062 chr3R 10403116 10403162 6 91 3.5 5.5 4.5 1.1 132 chr3R 10403030 3` UTR CG6325 - chr3R 10403096 3` UTR CG6325 - chr3R 10403162 3` UTR CG6325 - chr3R_6_10400001 chr3R_10400001 RAL-832 1402 chr3R 10531864 10531897 chr3R 10531952 10531973 5 92 2.5 0.5 1.5 2.0 109 chr3R 10531864 intron hth - chr3R 10531918 intron hth - chr3R 10531973 intron hth - chr3R_5_10530001 chr3R_10530001 RAL-832 1403 chr3R 10535314 10535341 chr3R 10535427 10535454 9 109 3.5 0.0 1.8 3.2 140 chr3R 10535314 intron hth - chr3R 10535384 intron hth - chr3R 10535454 intron hth - chr3R_9_10535001 chr3R_10535001 RAL-832 1404 chr3R 10607762 10607774 chr3R 10607914 10607932 4 160 1.5 2.0 1.8 1.4 170 chr3R 10607762 intron hth - chr3R 10607847 intron hth - chr3R 10607932 intron hth - chr3R_4_10605001 chr3R_10605001 RAL-832 1405 chr3R 10651806 10651815 chr3R 10651925 10651934 6 118 9.5 8.5 9.0 0.6 128 chr3R 10651806 intergenic not near genes chr3R 10651870 intergenic not near genes chr3R 10651934 intergenic not near genes chr3R_6_10650001 chr3R_10650001 RAL-832 1406 chr3R 10671519 10671565 chr3R 10671636 10671674 5 109 1.5 1.5 1.5 2.0 155 chr3R 10671519 intergenic not near genes chr3R 10671596 intergenic not near genes chr3R 10671674 intergenic not near genes chr3R_5_10670001 chr3R_10670001 RAL-832 1407 chr3R 10804154 10804201 chr3R 10811706 10811753 17.6 5 7552 5.0 3.5 4.2 1.0 7599 chr3R 10804154 intergenic CG14692 - chr3R 10807954 intergenic not near genes chr3R 10811753 3` UTR CG14693 - chr3R_5_10805001 chr3R_10805001 RAL-832 1408 chr3R 10817212 10817250 chr3R 10817300 10817340 10 93 3.5 3.5 3.5 2.2 128 chr3R 10817212 3` UTR CG4089 + chr3R 10817276 3` UTR CG4089 + chr3R 10817340 3` UTR CG4089 + chr3R_10_10815001 chr3R_10815001 RAL-832 1409 chr3R 10919677 10919716 chr3R 10919775 10919814 8 95 4.5 4.5 4.5 1.5 137 chr3R 10919677 intergenic not near genes chr3R 10919746 intergenic not near genes chr3R 10919814 intergenic not near genes chr3R_8_10915001 chr3R_10915001 RAL-832 1410 chr3R 10920054 10920075 chr3R 10920127 10920168 6 84 3.5 2.0 2.8 1.6 114 chr3R 10920054 intergenic not near genes chr3R 10920111 intergenic not near genes chr3R 10920168 intergenic not near genes chr3R_6_10920001 chr3R_10920001 RAL-832 1411 chr3R 10977694 10977737 chr3R 10977790 10977808 12 92 6.5 3.5 5.0 2.0 114 chr3R 10977694 intron CG34114 + chr3R 10977751 intron CG34114 + chr3R 10977808 intron CG34114 + chr3R_12_10975001 chr3R_10975001 RAL-832 1412 chr3R 11016951 11016986 chr3R 11017064 11017075 4 103 3.0 6.0 4.5 0.7 124 chr3R 11016951 intron CG34114 + chr3R 11017013 intron CG34114 + chr3R 11017075 intron CG34114 + chr3R_4_11015001 chr3R_11015001 RAL-832 1413 chr3R 11048560 11048605 chr3R 11048664 11048694 6 96 3.0 2.0 2.5 1.7 134 chr3R 11048560 3` UTR CG34114 + chr3R 11048627 3` UTR CG34114 + chr3R 11048694 3` UTR CG34114 + chr3R_6_11045001 chr3R_11045001 RAL-832 1414 chr3R 11056875 11056906 chr3R 11056972 11056994 5 91 2.5 0.0 1.2 2.3 119 chr3R 11056875 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11056994 intergenic not near genes chr3R_5_11055001 chr3R_11055001 RAL-832 1415 chr3R 11085465 11085489 chr3R 11085537 11085565 6 74 3.0 2.5 2.8 1.6 100 chr3R 11085465 3` UTR CR44940 - chr3R 11085515 intergenic CR44940 - chr3R 11085565 intergenic CR44940 - chr3R_6_11085001 chr3R_11085001 RAL-832 1416 chr3R 11197979 11197989 chr3R 11198082 11198102 5 105 8.0 2.0 5.0 0.8 123 chr3R 11197979 intron cu + chr3R 11198040 intron cu + chr3R 11198102 intron cu + chr3R_5_11195001 chr3R_11195001 RAL-832 1417 chr3R 11198000 11198016 chr3R 11198092 11198112 5 105 6.0 2.5 4.2 1.0 112 chr3R 11198000 intron cu + chr3R 11198056 intron cu + chr3R 11198112 intron cu + chr3R_5_11195001 chr3R_11195001 RAL-832 1418 chr3R 11242235 11242252 chr3R 11242339 11242346 4 104 10.0 3.0 6.5 0.5 111 chr3R 11242235 3` UTR CG17734 - chr3R 11242290 3` UTR CG17734 - chr3R 11242346 3` UTR CG17734 - chr3R_4_11240001 chr3R_11240001 RAL-832 1419 chr3R 11271419 11271450 chr3R 11271496 11271522 8 81 2.5 2.0 2.2 2.5 103 chr3R 11271419 3` UTR CR31386 - chr3R 11271470 3` UTR CR31386 - chr3R 11271522 3` UTR CR31386 - chr3R_8_11270001 chr3R_11270001 RAL-832 1420 chr3R 11342537 11342574 chr3R 11342633 11342670 10 93 3.5 5.0 4.2 1.9 133 chr3R 11342537 intron pros + chr3R 11342604 intron pros + chr3R 11342670 intron pros + chr3R_10_11340001 chr3R_11340001 RAL-832 1421 chr3R 11379219 11379263 chr3R 11388394 11388427 roo 5 9167 6.0 3.5 4.8 0.9 9208 chr3R 11379219 intron pros + chr3R 11383823 intron pros + chr3R 11388427 intron pros + chr3R_5_11380001 chr3R_11380001 RAL-832 1422 chr3R 11570382 11570413 chr3R 11570478 11570495 11 94 8.0 7.0 7.5 1.3 113 chr3R 11570382 intron Mrp4 + chr3R 11570438 intron Mrp4 + chr3R 11570495 intron Mrp4 + chr3R_11_11570001 chr3R_11570001 RAL-832 1423 chr3R 11770474 11770510 chr3R 11770570 11770603 15 96 1.5 5.0 3.2 3.6 129 chr3R 11770474 intron l(3)neo38 - chr3R 11770538 intron l(3)neo38 - chr3R 11770603 intron l(3)neo38 - chr3R_15_11770001 chr3R_11770001 RAL-832 1424 chr3R 11990637 11990649 chr3R 11990745 11990757 6 106 13.0 4.0 8.5 0.6 120 chr3R 11990637 intron mfas - chr3R 11990697 intron mfas - chr3R 11990757 intron mfas - chr3R_6_11990001 chr3R_11990001 RAL-832 1425 chr3R 12022868 12022910 chr3R 12025065 12025107 pogo 6 2192 2.5 4.5 3.5 1.3 2239 chr3R 12022868 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025107 intergenic not near genes chr3R_6_12020001 chr3R_12020001 RAL-832 1426 chr3R 12055386 12055410 chr3R 12055807 12055847 8 427 4.5 6.5 5.5 1.2 461 chr3R 12055386 intergenic not near genes chr3R 12055616 intergenic not near genes chr3R 12055847 intergenic not near genes chr3R_8_12055001 chr3R_12055001 RAL-832 1427 chr3R 12111888 12111917 chr3R 12111968 12112013 6 86 4.0 3.5 3.8 1.2 125 chr3R 12111888 intergenic dpr17 + chr3R 12111950 intergenic not near genes chr3R 12112013 intergenic not near genes chr3R_6_12110001 chr3R_12110001 RAL-832 1428 chr3R 12202271 12202302 chr3R 12202398 12202431 9 122 2.5 2.0 2.2 2.8 160 chr3R 12202271 intergenic not near genes chr3R 12202351 intergenic not near genes chr3R 12202431 intergenic not near genes chr3R_9_12200001 chr3R_12200001 RAL-832 1429 chr3R 12257454 12257475 chr3R 12257515 12257525 8 78 2.0 3.0 2.5 2.3 71 chr3R 12257454 intergenic not near genes chr3R 12257490 intergenic not near genes chr3R 12257525 intergenic not near genes chr3R_8_12255001 chr3R_12255001 RAL-832 1430 chr3R 12267838 12267855 chr3R 12267938 12267955 11 100 5.5 4.0 4.8 1.9 117 chr3R 12267838 intron svp + chr3R 12267896 intron svp + chr3R 12267955 intron svp + chr3R_11_12265001 chr3R_12265001 RAL-832 1431 chr3R 12267856 12267881 chr3R 12267937 12267981 6 95 4.0 4.0 4.0 1.2 125 chr3R 12267856 intron svp + chr3R 12267918 intron svp + chr3R 12267981 intron svp + chr3R_6_12265001 chr3R_12265001 RAL-832 1432 chr3R 12546449 12546484 chr3R 12546544 12546587 13 100 4.5 6.5 5.5 2.0 138 chr3R 12546449 intron Octbeta3R - chr3R 12546518 intron Octbeta3R - chr3R 12546587 intron Octbeta3R - chr3R_13_12545001 chr3R_12545001 RAL-832 1433 chr3R 12666747 12666798 chr3R 12666894 12666935 10 138 4.0 2.5 3.2 2.4 188 chr3R 12666747 intron CG14395 + chr3R 12666841 intron CG14395 + chr3R 12666935 intron CG14395 + chr3R_10_12665001 chr3R_12665001 RAL-832 1434 chr3R 12748941 12748992 chr3R 12749054 12749088 9 110 4.0 3.0 3.5 2.0 147 chr3R 12748941 intron beat-Vc - chr3R 12749014 intron beat-Vc - chr3R 12749088 intron beat-Vc - chr3R_9_12745001 chr3R_12745001 RAL-832 1435 chr3R 12763124 12763155 chr3R 12763221 12763232 9 90 0.5 5.5 3.0 2.2 108 chr3R 12763124 intron beat-Vc - chr3R 12763178 intron beat-Vc - chr3R 12763232 intron beat-Vc - chr3R_9_12760001 chr3R_12760001 RAL-832 1436 chr3R 12787929 12787952 chr3R 12788031 12788050 6 100 3.5 3.5 3.5 1.3 121 chr3R 12787929 intergenic not near genes chr3R 12787990 intergenic not near genes chr3R 12788050 intergenic not near genes chr3R_6_12785001 chr3R_12785001 RAL-832 1437 chr3R 12827570 12827606 chr3R 12827674 12827686 4 98 0.0 2.0 1.0 2.0 116 chr3R 12827570 intergenic not near genes chr3R 12827628 intergenic not near genes chr3R 12827686 intergenic not near genes chr3R_4_12825001 chr3R_12825001 RAL-832 1438 chr3R 12844568 12844620 chr3R 12844665 12844691 20 89 4.0 5.0 4.5 3.6 123 chr3R 12844568 intron beat-Va - chr3R 12844630 intron beat-Va - chr3R 12844691 intron beat-Va - chr3R_20_12840001 chr3R_12840001 RAL-832 1439 chr3R 12864562 12864590 chr3R 12865067 12865095 roo 6 505 2.5 4.0 3.2 1.4 533 chr3R 12864562 intergenic not near genes chr3R 12864828 intergenic not near genes chr3R 12865095 intergenic not near genes chr3R_6_12860001 chr3R_12860001 RAL-832 1440 chr3R 13018143 13018174 chr3R 13018235 13018251 4 90 7.0 4.0 5.5 0.6 108 chr3R 13018143 intron CtBP + chr3R 13018197 intron CtBP + chr3R 13018251 intron CtBP + chr3R_4_13015001 chr3R_13015001 RAL-832 1441 chr3R 13064763 13064795 chr3R 13064882 13064889 8 116 1.5 0.0 0.8 4.4 126 chr3R 13064763 intron sim + chr3R 13064826 intron sim + chr3R 13064889 intron sim + chr3R_8_13060001 chr3R_13060001 RAL-832 1442 chr3R 13066997 13067000 chr3R 13067098 13067101 4 104 2.5 7.5 5.0 0.7 104 chr3R 13066997 intron sim + chr3R 13067049 intron sim + chr3R 13067101 intron sim + chr3R_4_13065001 chr3R_13065001 RAL-832 1443 chr3R 13067849 13067861 chr3R 13067918 13067928 4 73 3.5 4.0 3.8 0.8 79 chr3R 13067849 intron sim + chr3R 13067888 intron sim + chr3R 13067928 intron sim + chr3R_4_13065001 chr3R_13065001 RAL-832 1444 chr3R 13075344 13075384 chr3R 13075445 13075485 9 97 1.0 0.5 0.8 5.0 141 chr3R 13075344 intron sim + chr3R 13075414 intron sim + chr3R 13075485 intron sim + chr3R_9_13075001 chr3R_13075001 RAL-832 1445 chr3R 13114564 13114578 chr3R 13114830 13114854 6 257 16.0 19.0 17.5 0.3 290 chr3R 13114564 intron timeout + chr3R 13114709 intron timeout + chr3R 13114854 intron timeout + chr3R_6_13110001 chr3R_13110001 RAL-832 1446 chr3R 13135819 13135841 chr3R 13138004 13138015 pogo 6 2181 2.0 3.0 2.5 1.7 2196 chr3R 13135819 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136917 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138015 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_6_13135001 chr3R_13135001 RAL-832 1447 chr3R 7773344 7773344 chr3R 13217322 13217322 4 5443978 15.0 9.0 12.0 0.3 5443978 chr3R 7773344 intergenic not near genes chr3R 10495333 intergenic not near genes chr3R 13217322 intergenic not near genes chr3R_4_10495001 chr3R_10495001 RAL-832 1448 chr3R 13314108 13314124 chr3R 13318885 13318926 Doc 8 4797 4.0 4.0 4.0 1.6 4818 chr3R 13314108 intergenic not near genes chr3R 13316517 intergenic not near genes chr3R 13318926 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 RAL-832 1449 chr3R 13348983 13349034 chr3R 13349079 13349129 9 92 2.5 4.0 3.2 2.1 146 chr3R 13348983 intergenic not near genes chr3R 13349056 intergenic not near genes chr3R 13349129 intergenic not near genes chr3R_9_13345001 chr3R_13345001 RAL-832 1450 chr3R 13364614 13364652 chr3R 13364718 13364741 6 96 3.0 0.0 1.5 2.4 127 chr3R 13364614 intron poly - chr3R 13364678 intron poly - chr3R 13364741 intron poly - chr3R_6_13360001 chr3R_13360001 RAL-832 1451 chr3R 13418650 13418681 chr3R 13418746 13418777 6 94 4.0 5.5 4.8 1.0 127 chr3R 13418650 intergenic not near genes chr3R 13418714 intergenic not near genes chr3R 13418777 intergenic not near genes chr3R_6_13415001 chr3R_13415001 RAL-832 1452 chr3R 13435368 13435418 chr3R 13435563 13435596 12 188 2.5 2.5 2.5 3.4 228 chr3R 13435368 intergenic yrt - chr3R 13435482 intergenic yrt - chr3R 13435596 intergenic not near genes chr3R_12_13435001 chr3R_13435001 RAL-832 1453 chr3R 13444466 13444488 chr3R 13444569 13444590 7 103 2.0 2.0 2.0 2.3 124 chr3R 13444466 intergenic CR45679 - chr3R 13444528 intergenic CR45679 - chr3R 13444590 intergenic not near genes chr3R_7_13440001 chr3R_13440001 RAL-832 1454 chr3R 13517209 13517243 chr3R 13520046 13520070 jockey 11 2831 4.0 4.5 4.2 2.1 2861 chr3R 13517209 intergenic not near genes chr3R 13518640 intergenic not near genes chr3R 13520070 intergenic not near genes chr3R_11_13515001 chr3R_13515001 RAL-832 1455 chr3R 13558202 13558234 chr3R 13558302 13558345 7 98 3.5 1.5 2.5 2.0 143 chr3R 13558202 intergenic not near genes chr3R 13558274 intergenic not near genes chr3R 13558345 intergenic not near genes chr3R_7_13555001 chr3R_13555001 RAL-832 1456 chr3R 13558946 13558978 chr3R 13559176 13559193 6 220 1.0 4.0 2.5 1.7 247 chr3R 13558946 intergenic not near genes chr3R 13559070 intergenic not near genes chr3R 13559193 intergenic not near genes chr3R_6_13555001 chr3R_13555001 RAL-832 1457 chr3R 13583927 13583971 chr3R 13584034 13584078 8 101 4.0 2.5 3.2 1.9 151 chr3R 13583927 intergenic not near genes chr3R 13584002 intergenic not near genes chr3R 13584078 intergenic not near genes chr3R_8_13580001 chr3R_13580001 RAL-832 1458 chr3R 13603043 13603070 chr3R 13603149 13603181 9 110 5.0 3.5 4.2 1.7 138 chr3R 13603043 intergenic not near genes chr3R 13603112 intergenic not near genes chr3R 13603181 intergenic not near genes chr3R_9_13600001 chr3R_13600001 RAL-832 1459 chr3R 13659717 13659848 chr3R 13659827 13659942 11 103 0.0 0.0 0.0 11.0 225 chr3R 13659717 intron Hrb87F - chr3R 13659830 intron Hrb87F - chr3R 13659942 intron Hrb87F - chr3R_11_13655001 chr3R_13655001 RAL-832 1460 chr3R 13672951 13672972 chr3R 13673024 13673070 11 94 1.5 5.0 3.2 2.6 119 chr3R 13672951 intron Task6 - chr3R 13673010 intron Task6 - chr3R 13673070 intron Task6 - chr3R_11_13670001 chr3R_13670001 RAL-832 1461 chr3R 13782040 13782080 chr3R 13782138 13782167 6 97 2.0 4.0 3.0 1.5 127 chr3R 13782040 exon CG9286 + chr3R 13782104 intergenic CG9286 +,Dip-B + chr3R 13782167 intergenic CG9286 +,Dip-B + chr3R_6_13780001 chr3R_13780001 RAL-832 1462 chr3R 13847038 13847077 chr3R 13847137 13847142 4 85 4.5 0.5 2.5 1.1 104 chr3R 13847038 intergenic not near genes chr3R 13847090 intergenic not near genes chr3R 13847142 intergenic not near genes chr3R_4_13845001 chr3R_13845001 RAL-832 1463 chr3R 13863672 13863715 chr3R 13863766 13863800 4 95 2.5 2.0 2.2 1.2 128 chr3R 13863672 intergenic not near genes chr3R 13863736 intergenic not near genes chr3R 13863800 intergenic not near genes chr3R_4_13860001 chr3R_13860001 RAL-832 1464 chr3R 13900342 13900382 chr3R 13900722 13900757 9 378 1.5 3.0 2.2 2.8 415 chr3R 13900342 intergenic not near genes chr3R 13900550 intergenic not near genes chr3R 13900757 intergenic not near genes chr3R_9_13900001 chr3R_13900001 RAL-832 1465 chr3R 13948210 13948237 chr3R 13948308 13948335 4 98 2.0 1.0 1.5 1.6 125 chr3R 13948210 intergenic CG31517 + chr3R 13948272 intergenic CG31517 + chr3R 13948335 intergenic CG31517 + chr3R_4_13945001 chr3R_13945001 RAL-832 1466 chr3R 14008470 14008498 chr3R 14008580 14008608 7 110 4.5 2.5 3.5 1.6 138 chr3R 14008470 intron rdx - chr3R 14008539 intron rdx - chr3R 14008608 intron rdx - chr3R_7_14005001 chr3R_14005001 RAL-832 1467 chr3R 14021634 14021661 chr3R 14023466 14023506 S-element 8 1839 3.0 6.5 4.8 1.4 1872 chr3R 14021634 intron rdx - chr3R 14022570 intron rdx - chr3R 14023506 intron rdx - chr3R_8_14020001 chr3R_14020001 RAL-832 1468 chr3R 14047751 14047769 chr3R 14047862 14047880 4 110 3.0 3.5 3.2 1.0 129 chr3R 14047751 intergenic not near genes chr3R 14047816 intergenic not near genes chr3R 14047880 intergenic not near genes chr3R_4_14045001 chr3R_14045001 RAL-832 1469 chr3R 14058112 14058147 chr3R 14058252 14058282 7 137 3.5 5.0 4.2 1.3 170 chr3R 14058112 intron foxo + chr3R 14058197 intron foxo + chr3R 14058282 intron foxo + chr3R_7_14055001 chr3R_14055001 RAL-832 1470 chr3R 14117426 14117469 chr3R 14117522 14117553 18 92 5.0 7.0 6.0 2.6 127 chr3R 14117426 intron Kif19A - chr3R 14117490 intron Kif19A - chr3R 14117553 intron Kif19A - chr3R_18_14115001 chr3R_14115001 RAL-832 1471 chr3R 14174956 14174987 chr3R 14175047 14175094 7 93 3.5 1.0 2.2 2.2 138 chr3R 14174956 3` UTR Dop1R1 - chr3R 14175025 3` UTR Dop1R1 - chr3R 14175094 3` UTR Dop1R1 - chr3R_7_14175001 chr3R_14175001 RAL-832 1472 chr3R 14180791 14180834 chr3R 14185576 14185619 F-element 16 4776 4.0 6.5 5.2 2.6 4828 chr3R 14180791 intron Dop1R1 - chr3R 14183205 intron Dop1R1 - chr3R 14185619 intron Dop1R1 - chr3R_16_14180001 chr3R_14180001 RAL-832 1473 chr3R 14308812 14308851 chr3R 14308983 14309023 6 171 1.5 1.0 1.2 2.7 211 chr3R 14308812 intergenic su(Hw) -,RpII15 + chr3R 14308918 intergenic RpII15 +,su(Hw) - chr3R 14309023 intergenic RpII15 +,su(Hw) - chr3R_6_14305001 chr3R_14305001 RAL-832 1474 chr3R 14386192 14386236 chr3R 14386296 14386340 6 101 0.0 2.5 1.2 2.7 148 chr3R 14386192 intergenic not near genes chr3R 14386266 intergenic not near genes chr3R 14386340 intergenic not near genes chr3R_6_14385001 chr3R_14385001 RAL-832 1475 chr3R 14440712 14440727 chr3R 14440808 14440823 5 96 3.0 5.5 4.2 1.0 111 chr3R 14440712 intron cv-c - chr3R 14440768 intron cv-c - chr3R 14440823 intron cv-c - chr3R_5_14440001 chr3R_14440001 RAL-832 1476 chr3R 14440733 14440752 chr3R 14440801 14440848 4 88 3.0 4.0 3.5 0.9 115 chr3R 14440733 intron cv-c - chr3R 14440790 intron cv-c - chr3R 14440848 intron cv-c - chr3R_4_14440001 chr3R_14440001 RAL-832 1477 chr3R 14469781 14469829 chr3R 14469877 14469915 12 86 2.0 4.5 3.2 2.9 134 chr3R 14469781 intron cv-c - chr3R 14469848 intron cv-c - chr3R 14469915 intron cv-c - chr3R_12_14465001 chr3R_14465001 RAL-832 1478 chr3R 14514471 14514508 chr3R 14514575 14514613 13 102 2.5 5.0 3.8 2.7 142 chr3R 14514471 3` UTR Pde6 - chr3R 14514542 3` UTR Pde6 - chr3R 14514613 3` UTR Pde6 - chr3R_13_14510001 chr3R_14510001 RAL-832 1479 chr3R 14533586 14533594 chr3R 14533670 14533702 6 100 0.0 3.0 1.5 2.4 116 chr3R 14533586 intron Pde6 - chr3R 14533644 intron Pde6 - chr3R 14533702 intron Pde6 - chr3R_6_14530001 chr3R_14530001 RAL-832 1480 chr3R 14546033 14546064 chr3R 14546116 14546155 6 86 4.0 0.5 2.2 1.9 122 chr3R 14546033 intron Pde6 - chr3R 14546094 intron Pde6 - chr3R 14546155 intron Pde6 - chr3R_6_14545001 chr3R_14545001 RAL-832 1481 chr3R 14686233 14686259 chr3R 14686619 14686659 7 394 1.0 4.5 2.8 1.8 426 chr3R 14686233 intron Meltrin - chr3R 14686446 intron Meltrin - chr3R 14686659 intron Meltrin - chr3R_7_14685001 chr3R_14685001 RAL-832 1482 chr3R 14704384 14704414 chr3R 14704460 14704461 12 83 3.0 4.5 3.8 2.5 77 chr3R 14704384 intron kibra - chr3R 14704422 intron kibra - chr3R 14704461 intron kibra - chr3R_12_14700001 chr3R_14700001 RAL-832 1483 chr3R 14824521 14824562 chr3R 14824634 14824668 7 105 5.0 0.0 2.5 2.0 147 chr3R 14824521 intron btsz - chr3R 14824594 intron btsz - chr3R 14824668 intron btsz - chr3R_7_14820001 chr3R_14820001 RAL-832 1484 chr3R 14840947 14840974 chr3R 14841028 14841075 8 92 0.0 1.5 0.8 4.4 128 chr3R 14840947 intron btsz - chr3R 14841011 intron btsz - chr3R 14841075 intron btsz - chr3R_8_14840001 chr3R_14840001 RAL-832 1485 chr3R 14898454 14898501 chr3R 14898594 14898641 18 137 5.0 1.0 3.0 4.5 187 chr3R 14898454 intergenic Nup93-2 -,CG3817 + chr3R 14898548 intergenic Nup93-2 -,CG3817 + chr3R 14898641 intergenic CG3817 +,Nup93-2 - chr3R_18_14895001 chr3R_14895001 RAL-832 1486 chr3R 15006870 15006884 chr3R 15007241 15007283 4 390 3.0 3.0 3.0 1.0 413 chr3R 15006870 intergenic not near genes chr3R 15007076 intergenic not near genes chr3R 15007283 intergenic not near genes chr3R_4_15005001 chr3R_15005001 RAL-832 1487 chr3R 15041408 15041413 chr3R 15045187 15045217 Doc 4 3795 0.0 2.5 1.2 1.8 3809 chr3R 15041408 intergenic not near genes chr3R 15043312 intergenic not near genes chr3R 15045217 intergenic not near genes chr3R_4_15040001 chr3R_15040001 RAL-832 1488 chr3R 15071182 15071214 chr3R 15071310 15071359 12 137 5.5 3.5 4.5 2.2 177 chr3R 15071182 intron dpr9 - chr3R 15071270 intron dpr9 - chr3R 15071359 intron dpr9 - chr3R_12_15070001 chr3R_15070001 RAL-832 1489 chr3R 15079787 15079825 chr3R 15080048 15080075 pogo 11 252 9.0 0.0 4.5 2.0 288 chr3R 15079787 3` UTR CG6966 - chr3R 15079931 3` UTR CG6966 - chr3R 15080075 3` UTR CG6966 - chr3R_11_15075001 chr3R_15075001 RAL-832 1490 chr3R 15102493 15102528 chr3R 15109769 15109802 412 6 7274 4.0 3.0 3.5 1.3 7309 chr3R 15102493 intron CG42788 - chr3R 15106148 intron CG42788 - chr3R 15109802 intron CG42788 - chr3R_6_15105001 chr3R_15105001 RAL-832 1491 chr3R 15127759 15127811 chr3R 15127859 15127895 19 94 5.5 4.0 4.8 3.3 136 chr3R 15127759 intron CG42788 - chr3R 15127827 intron CG42788 - chr3R 15127895 intron CG42788 - chr3R_19_15125001 chr3R_15125001 RAL-832 1492 chr3R 15132061 15132083 chr3R 15135115 15135148 Juan 6 3070 5.0 6.5 5.8 0.9 3087 chr3R 15132061 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135148 3` UTR CG6912 - chr3R_6_15130001 chr3R_15130001 RAL-832 1493 chr3R 15160544 15160594 chr3R 15160662 15160702 12 114 5.0 2.5 3.8 2.5 158 chr3R 15160544 intron Gyc88E + chr3R 15160623 intron Gyc88E + chr3R 15160702 intron Gyc88E + chr3R_12_15160001 chr3R_15160001 RAL-832 1494 chr3R 15190628 15190680 chr3R 15190773 15190825 24 144 5.0 2.5 3.8 5.0 197 chr3R 15190628 3` UTR Gyc88E + chr3R 15190726 3` UTR Gyc88E + chr3R 15190825 3` UTR Gyc88E + chr3R_24_15190001 chr3R_15190001 RAL-832 1495 chr3R 15320379 15320422 chr3R 15320642 15320661 16 255 3.0 5.0 4.0 3.2 282 chr3R 15320379 5` UTR CG44040 + chr3R 15320520 exon CG44040 + chr3R 15320661 3` UTR CG44040 + chr3R_16_15320001 chr3R_15320001 RAL-832 1496 chr3R 15406125 15406169 chr3R 15406226 15406269 11 97 3.0 3.0 3.0 2.8 144 chr3R 15406125 intron CG6125 - chr3R 15406197 intron CG6125 - chr3R 15406269 intron CG6125 - chr3R_11_15405001 chr3R_15405001 RAL-832 1497 chr3R 15570151 15570159 chr3R 15570247 15570259 5 101 3.5 0.0 1.8 1.8 108 chr3R 15570151 intergenic not near genes chr3R 15570205 intergenic not near genes chr3R 15570259 intergenic not near genes chr3R_5_15570001 chr3R_15570001 RAL-832 1498 chr3R 15601184 15601195 chr3R 15608692 15608736 412 7 7521 3.5 7.0 5.2 1.1 7552 chr3R 15601184 intergenic not near genes chr3R 15604960 intergenic not near genes chr3R 15608736 intergenic not near genes chr3R_7_15600001 chr3R_15600001 RAL-832 1499 chr3R 15635188 15635239 chr3R 15635329 15635366 4 130 0.0 5.0 2.5 1.1 178 chr3R 15635188 intergenic CG43335 + chr3R 15635277 intergenic CG43335 + chr3R 15635366 intergenic CG43335 + chr3R_4_15635001 chr3R_15635001 RAL-832 1500 chr3R 15868928 15868957 chr3R 15869028 15869040 6 93 8.5 0.0 4.2 1.2 112 chr3R 15868928 intron CG31183 - chr3R 15868984 intron CG31183 - chr3R 15869040 intron CG31183 - chr3R_6_15865001 chr3R_15865001 RAL-832 1501 chr3R 15878077 15878100 chr3R 15878184 15878208 7 108 3.5 6.5 5.0 1.2 131 chr3R 15878077 intergenic not near genes chr3R 15878142 intergenic not near genes chr3R 15878208 intergenic not near genes chr3R_7_15875001 chr3R_15875001 RAL-832 1502 chr3R 15950140 15950178 chr3R 15950238 15950261 7 91 7.0 3.0 5.0 1.2 121 chr3R 15950140 intron Sap47 + chr3R 15950200 intron,3` UTR Sap47 +,CG31088 - chr3R 15950261 intron,exon Sap47 +,CG31088 - chr3R_7_15950001 chr3R_15950001 RAL-832 1503 chr3R 16225069 16225115 chr3R 16225174 16225205 10 103 3.0 4.5 3.8 2.1 136 chr3R 16225069 intergenic not near genes chr3R 16225137 intergenic not near genes chr3R 16225205 intergenic tara + chr3R_10_16225001 chr3R_16225001 RAL-832 1504 chr3R 16246524 16246557 chr3R 16246601 16246631 6 87 0.5 3.5 2.0 2.0 107 chr3R 16246524 intron tara + chr3R 16246578 intron tara + chr3R 16246631 intron tara + chr3R_6_16245001 chr3R_16245001 RAL-832 1505 chr3R 16889950 16889989 chr3R 16890037 16890078 7 86 0.5 2.0 1.2 3.2 128 chr3R 16889950 intron iab-8 - chr3R 16890014 intron iab-8 - chr3R 16890078 3` UTR iab-8 - chr3R_7_16890001 chr3R_16890001 RAL-832 1506 chr3R 16891608 16891619 chr3R 16891819 16891830 4 211 6.0 3.5 4.8 0.7 222 chr3R 16891608 intron iab-8 - chr3R 16891719 intron iab-8 - chr3R 16891830 intron iab-8 - chr3R_4_16890001 chr3R_16890001 RAL-832 1507 chr3R 16921815 16921831 chr3R 16921919 16921935 4 102 4.5 3.5 4.0 0.8 120 chr3R 16921815 intron iab-8 - chr3R 16921875 intron iab-8 - chr3R 16921935 intron iab-8 - chr3R_4_16920001 chr3R_16920001 RAL-832 1508 chr3R 16921836 16921864 chr3R 16921915 16921944 8 94 1.0 3.0 2.0 2.7 108 chr3R 16921836 intron iab-8 - chr3R 16921890 intron iab-8 - chr3R 16921944 intron iab-8 - chr3R_8_16920001 chr3R_16920001 RAL-832 1509 chr3R 17013823 17013864 chr3R 17013993 17014006 7 160 2.5 1.0 1.8 2.5 183 chr3R 17013823 intergenic not near genes chr3R 17013914 intergenic not near genes chr3R 17014006 intergenic not near genes chr3R_7_17010001 chr3R_17010001 RAL-832 1510 chr3R 17015551 17015585 chr3R 17015861 17015884 6 306 3.0 3.0 3.0 1.5 333 chr3R 17015551 intron Pxd + chr3R 17015718 intron Pxd + chr3R 17015884 intron Pxd + chr3R_6_17015001 chr3R_17015001 RAL-832 1511 chr3R 17120511 17120534 chr3R 17120722 17120742 5 228 4.5 3.5 4.0 1.0 231 chr3R 17120511 intron,exon cher -,CG34278 + chr3R 17120626 intron,exon cher -,CG34278 + chr3R 17120742 intron,exon cher -,CG34278 + chr3R_5_17120001 chr3R_17120001 RAL-832 1512 chr3R 17294652 17294702 chr3R 17295100 17295128 BS 12 440 0.5 3.5 2.0 4.0 476 chr3R 17294652 intergenic not near genes chr3R 17294890 intergenic not near genes chr3R 17295128 intergenic not near genes chr3R_12_17290001 chr3R_17290001 RAL-832 1513 chr3R 17346688 17346716 chr3R 17348254 17348288 F-element 10 1578 3.5 7.0 5.2 1.6 1600 chr3R 17346688 intron beat-IIa - chr3R 17347488 intron beat-IIa - chr3R 17348288 intron beat-IIa - chr3R_10_17345001 chr3R_17345001 RAL-832 1514 chr3R 17393136 17393191 chr3R 17393232 17393260 15 92 3.0 3.0 3.0 3.8 124 chr3R 17393136 intergenic sds22 +,CREG - chr3R 17393198 intergenic CREG -,sds22 + chr3R 17393260 intergenic CREG -,sds22 + chr3R_15_17390001 chr3R_17390001 RAL-832 1515 chr3R 17463162 17463182 chr3R 17463247 17463262 5 92 2.0 7.0 4.5 0.9 100 chr3R 17463162 intergenic not near genes chr3R 17463212 intergenic not near genes chr3R 17463262 intergenic not near genes chr3R_5_17460001 chr3R_17460001 RAL-832 1516 chr3R 17465315 17465349 chr3R 17465419 17465433 15 97 3.0 5.0 4.0 3.0 118 chr3R 17465315 intergenic not near genes chr3R 17465374 intergenic not near genes chr3R 17465433 intergenic not near genes chr3R_15_17465001 chr3R_17465001 RAL-832 1517 chr3R 17481282 17481299 chr3R 17481380 17481403 4 95 2.5 3.5 3.0 1.0 121 chr3R 17481282 intron Dscam3 - chr3R 17481342 intron Dscam3 - chr3R 17481403 intron Dscam3 - chr3R_4_17480001 chr3R_17480001 RAL-832 1518 chr3R 17497924 17497993 chr3R 17498050 17498077 6 108 0.0 3.5 1.8 2.1 153 chr3R 17497924 intron Dscam3 - chr3R 17498000 intron Dscam3 - chr3R 17498077 intron Dscam3 - chr3R_6_17495001 chr3R_17495001 RAL-832 1519 chr3R 17506340 17506389 chr3R 17506438 17506482 6 97 5.0 1.5 3.2 1.4 142 chr3R 17506340 intergenic not near genes chr3R 17506411 intergenic not near genes chr3R 17506482 intergenic not near genes chr3R_6_17505001 chr3R_17505001 RAL-832 1520 chr3R 17543185 17543190 chr3R 17543256 17543286 4 86 7.0 6.5 6.8 0.5 101 chr3R 17543185 intron SF1 + chr3R 17543236 intron SF1 + chr3R 17543286 intron SF1 + chr3R_4_17540001 chr3R_17540001 RAL-832 1521 chr3R 17638304 17638348 chr3R 17638810 17638854 roo 10 506 3.5 8.5 6.0 1.4 550 chr3R 17638304 intron CG43175 + chr3R 17638579 intron CG43175 + chr3R 17638854 intron,intron CG43175 +,CR45222 + chr3R_10_17635001 chr3R_17635001 RAL-832 1522 chr3R 17645685 17645722 chr3R 17645835 17645872 7 149 1.5 1.0 1.2 3.2 187 chr3R 17645685 intergenic CG43175 + chr3R 17645778 intergenic not near genes chr3R 17645872 intergenic not near genes chr3R_7_17645001 chr3R_17645001 RAL-832 1523 chr3R 17773376 17773390 chr3R 17773476 17773487 4 99 0.5 2.5 1.5 1.6 111 chr3R 17773376 intron CG43102 - chr3R 17773432 intron CG43102 - chr3R 17773487 exon CG43102 - chr3R_4_17770001 chr3R_17770001 RAL-832 1524 chr3R 17811176 17811203 chr3R 17811276 17811302 5 100 6.5 0.0 3.2 1.2 126 chr3R 17811176 intergenic CG18012 -,tinc + chr3R 17811239 intergenic CG18012 -,tinc + chr3R 17811302 intergenic CG18012 -,tinc + chr3R_5_17810001 chr3R_17810001 RAL-832 1525 chr3R 17823198 17823233 chr3R 17823274 17823312 9 93 2.5 3.0 2.8 2.4 114 chr3R 17823198 intron tinc + chr3R 17823255 intron tinc + chr3R 17823312 intron tinc + chr3R_9_17820001 chr3R_17820001 RAL-832 1526 chr3R 17840367 17840370 chr3R 17840460 17840462 4 95 9.5 5.0 7.2 0.5 95 chr3R 17840367 intron tinc + chr3R 17840414 intron tinc + chr3R 17840462 intron tinc + chr3R_4_17840001 chr3R_17840001 RAL-832 1527 chr3R 17912647 17912699 chr3R 17912784 17912791 9 123 1.5 6.0 3.8 1.9 144 chr3R 17912647 intron Rim - chr3R 17912719 intron Rim - chr3R 17912791 intron Rim - chr3R_9_17910001 chr3R_17910001 RAL-832 1528 chr3R 17942068 17942088 chr3R 17942156 17942177 6 103 2.0 3.5 2.8 1.6 109 chr3R 17942068 intron cpo + chr3R 17942122 intron cpo + chr3R 17942177 intron cpo + chr3R_6_17940001 chr3R_17940001 RAL-832 1529 chr3R 18041744 18041774 chr3R 18041830 18041861 10 90 0.0 0.0 0.0 10.0 117 chr3R 18041744 intergenic not near genes chr3R 18041802 intergenic not near genes chr3R 18041861 intergenic not near genes chr3R_10_18040001 chr3R_18040001 RAL-832 1530 chr3R 18061577 18061611 chr3R 18063154 18063194 F-element 18 1585 5.0 4.5 4.8 3.1 1617 chr3R 18061577 intergenic not near genes chr3R 18062386 intergenic not near genes chr3R 18063194 intergenic not near genes chr3R_18_18060001 chr3R_18060001 RAL-832 1531 chr3R 18078135 18078181 chr3R 18078234 18078257 4 88 5.0 0.0 2.5 1.1 122 chr3R 18078135 intergenic not near genes chr3R 18078196 intergenic not near genes chr3R 18078257 intergenic not near genes chr3R_4_18075001 chr3R_18075001 RAL-832 1532 chr3R 18322808 18322818 chr3R 18323425 18323474 6 637 19.5 15.5 17.5 0.3 666 chr3R 18322808 intron CG31235 - chr3R 18323141 intron CG31235 - chr3R 18323474 intron CG31235 - chr3R_6_18320001 chr3R_18320001 RAL-832 1533 chr3R 18472278 18472295 chr3R 18472399 18472411 4 117 4.5 3.0 3.8 0.8 133 chr3R 18472278 intron fru - chr3R 18472344 intron fru - chr3R 18472411 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-832 1534 chr3R 18606514 18606534 chr3R 18610736 18610769 F-element 8 4241 3.5 5.5 4.5 1.5 4255 chr3R 18606514 intron,intron qin +,CG14304 - chr3R 18608642 intron,intron qin +,CG14304 - chr3R 18610769 intron,intron qin +,CG14304 - chr3R_8_18605001 chr3R_18605001 RAL-832 1535 chr3R 18617700 18617742 chr3R 18617800 18617842 16 95 3.5 5.0 4.2 3.1 142 chr3R 18617700 intron,intron qin +,CG14304 - chr3R 18617771 intron,intron qin +,CG14304 - chr3R 18617842 intron,intron qin +,CG14304 - chr3R_16_18615001 chr3R_18615001 RAL-832 1536 chr3R 18670377 18670412 chr3R 18670475 18670522 5 103 1.5 6.0 3.8 1.0 145 chr3R 18670377 intron CG7702 + chr3R 18670450 intron CG7702 + chr3R 18670522 intron CG7702 + chr3R_5_18670001 chr3R_18670001 RAL-832 1537 chr3R 18716898 18716927 chr3R 18717053 18717097 11 165 4.0 5.0 4.5 2.0 199 chr3R 18716898 intron,3` UTR Cha +,VAChT + chr3R 18716998 intron,3` UTR Cha +,VAChT + chr3R 18717097 intron,3` UTR Cha +,VAChT + chr3R_11_18715001 chr3R_18715001 RAL-832 1538 chr3R 18766767 18766808 chr3R 18766853 18766906 10 86 6.0 2.5 4.2 1.9 139 chr3R 18766767 intron CG7720 - chr3R 18766836 intron CG7720 - chr3R 18766906 intron CG7720 - chr3R_10_18765001 chr3R_18765001 RAL-832 1539 chr3R 18784913 18784939 chr3R 18785012 18785053 7 107 5.0 2.0 3.5 1.6 140 chr3R 18784913 intron CG7720 - chr3R 18784983 intron CG7720 - chr3R 18785053 intron CG7720 - chr3R_7_18780001 chr3R_18780001 RAL-832 1540 chr3R 18792786 18792832 chr3R 18792889 18792935 5 100 2.0 0.0 1.0 2.5 149 chr3R 18792786 intron CG7720 - chr3R 18792860 intron CG7720 - chr3R 18792935 intron CG7720 - chr3R_5_18790001 chr3R_18790001 RAL-832 1541 chr3R 18812065 18812096 chr3R 18812156 18812165 5 87 1.5 2.0 1.8 1.8 100 chr3R 18812065 intron CG18208 - chr3R 18812115 intron CG18208 - chr3R 18812165 intron CG18208 - chr3R_5_18810001 chr3R_18810001 RAL-832 1542 chr3R 18817496 18817532 chr3R 18817608 18817650 9 114 0.5 0.0 0.2 7.5 154 chr3R 18817496 intron CG18208 - chr3R 18817573 intron CG18208 - chr3R 18817650 intron CG18208 - chr3R_9_18815001 chr3R_18815001 RAL-832 1543 chr3R 18870813 18870854 chr3R 18870914 18870956 5 101 4.5 7.5 6.0 0.7 143 chr3R 18870813 intergenic not near genes chr3R 18870884 intergenic not near genes chr3R 18870956 intergenic not near genes chr3R_5_18870001 chr3R_18870001 RAL-832 1544 chr3R 18879899 18879904 chr3R 18879994 18880000 5 96 0.0 0.0 0.0 5.0 101 chr3R 18879899 intergenic not near genes chr3R 18879950 intergenic not near genes chr3R 18880000 intergenic not near genes chr3R_5_18875001 chr3R_18875001 RAL-832 1545 chr3R 19139762 19139810 chr3R 19139877 19139925 12 110 4.0 3.5 3.8 2.5 163 chr3R 19139762 3` UTR Ppcs - chr3R 19139844 3` UTR Ppcs - chr3R 19139925 3` UTR Ppcs - chr3R_12_19135001 chr3R_19135001 RAL-832 1546 chr3R 19276922 19276933 chr3R 19277022 19277033 5 100 3.0 1.5 2.2 1.6 111 chr3R 19276922 intergenic not near genes chr3R 19276978 intergenic not near genes chr3R 19277033 intergenic not near genes chr3R_5_19275001 chr3R_19275001 RAL-832 1547 chr3R 19276938 19276946 chr3R 19277021 19277045 5 96 0.5 1.5 1.0 2.5 107 chr3R 19276938 intergenic not near genes chr3R 19276992 intergenic not near genes chr3R 19277045 intergenic not near genes chr3R_5_19275001 chr3R_19275001 RAL-832 1548 chr3R 19344645 19344699 chr3R 19344800 19344853 10 153 2.5 4.5 3.5 2.2 208 chr3R 19344645 intergenic not near genes chr3R 19344749 intergenic not near genes chr3R 19344853 intergenic not near genes chr3R_10_19340001 chr3R_19340001 RAL-832 1549 chr3R 19389286 19389328 chr3R 19389448 19389473 9 154 6.0 5.5 5.8 1.3 187 chr3R 19389286 intron,intron Ino80 -,CG3734 + chr3R 19389380 intron,exon Ino80 -,CG3734 + chr3R 19389473 intron,exon Ino80 -,CG3734 + chr3R_9_19385001 chr3R_19385001 RAL-832 1550 chr3R 19440215 19440243 chr3R 19440315 19440321 4 92 5.0 0.5 2.8 1.1 106 chr3R 19440215 intron CG31221 + chr3R 19440268 intron CG31221 + chr3R 19440321 intron CG31221 + chr3R_4_19440001 chr3R_19440001 RAL-832 1551 chr3R 19602550 19602598 chr3R 19602650 19602698 13 98 3.5 3.0 3.2 3.1 148 chr3R 19602550 exon CG7333 + chr3R 19602624 3` UTR CG7333 + chr3R 19602698 intergenic CG7333 + chr3R_13_19600001 chr3R_19600001 RAL-832 1552 chr3R 19681584 19681631 chr3R 19681692 19681742 9 109 1.5 3.0 2.2 2.8 158 chr3R 19681584 intron Naam + chr3R 19681663 intron Naam + chr3R 19681742 intron Naam + chr3R_9_19680001 chr3R_19680001 RAL-832 1553 chr3R 19716195 19716249 chr3R 19716292 19716326 13 91 2.0 0.0 1.0 6.5 131 chr3R 19716195 intergenic CG34286 - chr3R 19716260 intergenic CG34286 - chr3R 19716326 intergenic CG34286 - chr3R_13_19715001 chr3R_19715001 RAL-832 1554 chr3R 19750032 19750063 chr3R 19750131 19750163 4 96 1.5 5.0 3.2 1.0 131 chr3R 19750032 intron GluClalpha + chr3R 19750098 intron GluClalpha + chr3R 19750163 intron GluClalpha + chr3R_4_19750001 chr3R_19750001 RAL-832 1555 chr3R 19783162 19783212 chr3R 19783270 19783319 10 102 4.0 5.0 4.5 1.8 157 chr3R 19783162 intergenic CG11407 +,CG11453 + chr3R 19783240 intergenic CG11407 +,CG11453 + chr3R 19783319 intergenic CG11407 +,CG11453 + chr3R_10_19780001 chr3R_19780001 RAL-832 1556 chr3R 19793908 19793915 chr3R 19794006 19794027 4 108 1.5 4.5 3.0 1.0 119 chr3R 19793908 intergenic bnl - chr3R 19793968 intergenic bnl - chr3R 19794027 intergenic bnl - chr3R_4_19790001 chr3R_19790001 RAL-832 1557 chr3R 20109523 20109563 chr3R 20114748 20114789 copia 10 5219 4.5 2.0 3.2 2.4 5266 chr3R 20109523 intergenic not near genes chr3R 20112156 intergenic not near genes chr3R 20114789 intergenic CG10887 + chr3R_10_20110001 chr3R_20110001 RAL-832 1558 chr3R 20124548 20124601 chr3R 20124653 20124683 9 101 1.0 1.0 1.0 4.5 135 chr3R 20124548 intergenic not near genes chr3R 20124616 intergenic not near genes chr3R 20124683 intergenic not near genes chr3R_9_20120001 chr3R_20120001 RAL-832 1559 chr3R 20156697 20156709 chr3R 20165884 20165887 roo 4 9186 5.0 7.5 6.2 0.6 9190 chr3R 20156697 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165887 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-832 1560 chr3R 20180692 20180715 chr3R 20180797 20180820 5 104 3.0 3.0 3.0 1.2 128 chr3R 20180692 intergenic not near genes chr3R 20180756 intergenic not near genes chr3R 20180820 intergenic not near genes chr3R_5_20180001 chr3R_20180001 RAL-832 1561 chr3R 20197096 20197148 chr3R 20197193 20197245 5 97 4.5 0.5 2.5 1.4 149 chr3R 20197096 intergenic not near genes chr3R 20197170 intergenic not near genes chr3R 20197245 intergenic not near genes chr3R_5_20195001 chr3R_20195001 RAL-832 1562 chr3R 20205548 20205591 chr3R 20205690 20205733 11 138 2.0 6.5 4.2 2.1 185 chr3R 20205548 intron Nlg4 + chr3R 20205640 intron Nlg4 + chr3R 20205733 intron Nlg4 + chr3R_11_20205001 chr3R_20205001 RAL-832 1563 chr3R 20245265 20245303 chr3R 20248895 20248933 F-element 11 3626 3.5 1.5 2.5 3.1 3668 chr3R 20245265 3` UTR Nlg4 + chr3R 20247099 intergenic not near genes chr3R 20248933 intergenic not near genes chr3R_11_20245001 chr3R_20245001 RAL-832 1564 chr3R 20266502 20266544 chr3R 20272986 20273025 Burdock 14 6486 0.0 4.0 2.0 4.7 6523 chr3R 20266502 intron cic + chr3R 20269764 intron cic + chr3R 20273025 intron cic + chr3R_14_20265001 chr3R_20265001 RAL-832 1565 chr3R 20282257 20282308 chr3R 20282353 20282404 7 91 1.0 3.0 2.0 2.3 147 chr3R 20282257 intron cic + chr3R 20282330 intron cic + chr3R 20282404 intron cic + chr3R_7_20280001 chr3R_20280001 RAL-832 1566 chr3R 20308193 20308217 chr3R 20308284 20308336 5 107 4.0 0.0 2.0 1.7 143 chr3R 20308193 intergenic not near genes chr3R 20308264 intergenic not near genes chr3R 20308336 intergenic not near genes chr3R_5_20305001 chr3R_20305001 RAL-832 1567 chr3R 20330980 20331000 chr3R 20331486 20331495 roo 8 505 9.0 3.5 6.2 1.1 515 chr3R 20330980 intergenic Sirt2 + chr3R 20331238 intergenic Sirt2 + chr3R 20331495 intergenic not near genes chr3R_8_20330001 chr3R_20330001 RAL-832 1568 chr3R 20331001 20331028 chr3R 20331482 20331524 roo 18 496 6.0 3.5 4.8 3.1 523 chr3R 20331001 intergenic Sirt2 + chr3R 20331262 intergenic Sirt2 + chr3R 20331524 intergenic not near genes chr3R_18_20330001 chr3R_20330001 RAL-832 1569 chr3R 20465591 20465639 chr3R 20465709 20465761 10 120 5.5 4.0 4.8 1.7 170 chr3R 20465591 intron Gfrl - chr3R 20465676 intron Gfrl - chr3R 20465761 intron Gfrl - chr3R_10_20465001 chr3R_20465001 RAL-832 1570 chr3R 20469293 20469451 chr3R 20469412 20469539 5 101 0.0 0.0 0.0 5.0 246 chr3R 20469293 intron Gfrl - chr3R 20469416 intron Gfrl - chr3R 20469539 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-832 1571 chr3R 20506582 20506610 chr3R 20507405 20507433 BS 7 815 5.0 7.0 6.0 1.0 851 chr3R 20506582 intergenic Or92a + chr3R 20507008 intergenic CG4288 - chr3R 20507433 3` UTR CG4288 - chr3R_7_20505001 chr3R_20505001 RAL-832 1572 chr3R 20513000 20513032 chr3R 20515709 20515755 opus 5 2718 3.0 0.0 1.5 2.0 2755 chr3R 20513000 intergenic not near genes chr3R 20514378 intergenic not near genes chr3R 20515755 intergenic not near genes chr3R_5_20510001 chr3R_20510001 RAL-832 1573 chr3R 20592768 20592812 chr3R 20592884 20592902 6 110 0.0 3.0 1.5 2.4 134 chr3R 20592768 intergenic CG4159 -,bon + chr3R 20592835 intergenic CG4159 -,bon + chr3R 20592902 intergenic CG4159 -,bon + chr3R_6_20590001 chr3R_20590001 RAL-832 1574 chr3R 20703462 20703512 chr3R 20703876 20703926 14 409 7.5 4.0 5.8 2.1 464 chr3R 20703462 intron Oamb - chr3R 20703694 intron Oamb - chr3R 20703926 intron Oamb - chr3R_14_20700001 chr3R_20700001 RAL-832 1575 chr3R 20787418 20787458 chr3R 20787529 20787567 5 106 1.5 3.0 2.2 1.6 149 chr3R 20787418 intron Syp + chr3R 20787492 intron Syp + chr3R 20787567 intron Syp + chr3R_5_20785001 chr3R_20785001 RAL-832 1576 chr3R 20848351 20848356 chr3R 20848445 20848466 4 105 0.5 7.5 4.0 0.8 115 chr3R 20848351 intergenic not near genes chr3R 20848408 intergenic not near genes chr3R 20848466 intergenic not near genes chr3R_4_20845001 chr3R_20845001 RAL-832 1577 chr3R 20850067 20850106 chr3R 20850172 20850198 12 97 0.5 2.5 1.5 4.8 131 chr3R 20850067 intergenic RpS30 + chr3R 20850132 intergenic RpS30 + chr3R 20850198 intergenic RpS30 + chr3R_12_20850001 chr3R_20850001 RAL-832 1578 chr3R 20870237 20870246 chr3R 20870342 20870351 4 105 2.5 2.5 2.5 1.1 114 chr3R 20870237 intergenic not near genes chr3R 20870294 intergenic not near genes chr3R 20870351 intergenic not near genes chr3R_4_20870001 chr3R_20870001 RAL-832 1579 chr3R 20870253 20870279 chr3R 20870338 20870376 7 87 0.0 2.0 1.0 3.5 123 chr3R 20870253 intergenic not near genes chr3R 20870314 intergenic not near genes chr3R 20870376 intergenic not near genes chr3R_7_20870001 chr3R_20870001 RAL-832 1580 chr3R 20899893 20899937 chr3R 20900009 20900053 18 115 1.5 4.5 3.0 4.5 160 chr3R 20899893 intergenic not near genes chr3R 20899973 intergenic not near genes chr3R 20900053 intergenic not near genes chr3R_18_20895001 chr3R_20895001 RAL-832 1581 chr3R 20979503 20979517 chr3R 20979574 20979609 5 83 3.0 3.5 3.2 1.2 106 chr3R 20979503 intron Calx + chr3R 20979556 intron Calx + chr3R 20979609 intron Calx + chr3R_5_20975001 chr3R_20975001 RAL-832 1582 chr3R 20990719 20990751 chr3R 20990805 20990847 10 94 2.0 4.0 3.0 2.5 128 chr3R 20990719 intron Calx + chr3R 20990783 intron Calx + chr3R 20990847 intron Calx + chr3R_10_20990001 chr3R_20990001 RAL-832 1583 chr3R 21020385 21020433 chr3R 21020475 21020529 19 91 6.0 6.5 6.2 2.6 144 chr3R 21020385 3` UTR Rlip + chr3R 21020457 3` UTR Rlip + chr3R 21020529 3` UTR Rlip + chr3R_19_21020001 chr3R_21020001 RAL-832 1584 chr3R 21074808 21074829 chr3R 21075034 21075049 5 230 3.0 7.5 5.2 0.8 241 chr3R 21074808 intron dmrt93B + chr3R 21074928 intron dmrt93B + chr3R 21075049 intron dmrt93B + chr3R_5_21070001 chr3R_21070001 RAL-832 1585 chr3R 21129805 21130009 chr3R 21129912 21130106 12 95 1.0 0.0 0.5 8.0 301 chr3R 21129805 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129956 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130106 intergenic Ice2 +,Obp93a - chr3R_12_21125001 chr3R_21125001 RAL-832 1586 chr3R 21154533 21154584 chr3R 21154758 21154819 5 233 2.0 0.0 1.0 2.5 286 chr3R 21154533 intron SNF4Agamma + chr3R 21154676 intron SNF4Agamma + chr3R 21154819 intron SNF4Agamma + chr3R_5_21150001 chr3R_21150001 RAL-832 1587 chr3R 21240458 21240472 chr3R 21240545 21240584 6 103 1.0 1.5 1.2 2.7 126 chr3R 21240458 intergenic not near genes chr3R 21240521 intergenic not near genes chr3R 21240584 intergenic not near genes chr3R_6_21240001 chr3R_21240001 RAL-832 1588 chr3R 21310928 21311012 chr3R 21314442 21314534 5 3522 11.0 0.0 5.5 0.8 3606 chr3R 21310928 5` UTR Hsromega + chr3R 21312731 5` UTR Hsromega + chr3R 21314534 5` UTR Hsromega + chr3R_5_21310001 chr3R_21310001 RAL-832 1589 chr3R 21321491 21321504 chr3R 21321601 21321620 4 114 0.0 4.0 2.0 1.3 129 chr3R 21321491 intron CG16791 - chr3R 21321556 intron CG16791 - chr3R 21321620 intron CG16791 - chr3R_4_21320001 chr3R_21320001 RAL-832 1590 chr3R 21321507 21321531 chr3R 21321597 21321647 9 111 0.0 3.0 1.5 3.6 140 chr3R 21321507 intron CG16791 - chr3R 21321577 intron CG16791 - chr3R 21321647 intron CG16791 - chr3R_9_21320001 chr3R_21320001 RAL-832 1591 chr3R 21330877 21330885 chr3R 21330969 21330980 5 96 7.5 1.5 4.5 0.9 103 chr3R 21330877 intron CG16791 - chr3R 21330928 intron CG16791 - chr3R 21330980 intron CG16791 - chr3R_5_21330001 chr3R_21330001 RAL-832 1592 chr3R 21330889 21330895 chr3R 21330966 21331000 4 90 5.5 1.0 3.2 1.0 111 chr3R 21330889 intron CG16791 - chr3R 21330944 intron CG16791 - chr3R 21331000 intron CG16791 - chr3R_4_21330001 chr3R_21330001 RAL-832 1593 chr3R 21383279 21383299 chr3R 21383363 21383374 4 82 2.0 6.5 4.2 0.8 95 chr3R 21383279 intergenic not near genes chr3R 21383326 intergenic not near genes chr3R 21383374 intergenic not near genes chr3R_4_21380001 chr3R_21380001 RAL-832 1594 chr3R 21393479 21393486 chr3R 21393609 21393616 4 129 1.0 2.5 1.8 1.4 137 chr3R 21393479 intergenic not near genes chr3R 21393548 intergenic not near genes chr3R 21393616 intergenic not near genes chr3R_4_21390001 chr3R_21390001 RAL-832 1595 chr3R 21464387 21464425 chr3R 21464493 21464510 7 100 2.5 1.0 1.8 2.5 123 chr3R 21464387 intergenic not near genes chr3R 21464448 intergenic not near genes chr3R 21464510 intergenic not near genes chr3R_7_21460001 chr3R_21460001 RAL-832 1596 chr3R 21472019 21472035 chr3R 21472103 21472111 4 81 1.0 6.5 3.8 0.8 92 chr3R 21472019 intergenic not near genes chr3R 21472065 intergenic not near genes chr3R 21472111 intergenic not near genes chr3R_4_21470001 chr3R_21470001 RAL-832 1597 chr3R 21506861 21506914 chr3R 21506967 21506996 12 102 0.0 1.5 0.8 6.7 135 chr3R 21506861 intron C15 + chr3R 21506928 intron C15 + chr3R 21506996 intron C15 + chr3R_12_21505001 chr3R_21505001 RAL-832 1598 chr3R 21582994 21583013 chr3R 21583098 21583134 4 116 1.0 3.0 2.0 1.3 140 chr3R 21582994 intron InR - chr3R 21583064 intron InR - chr3R 21583134 intron InR - chr3R_4_21580001 chr3R_21580001 RAL-832 1599 chr3R 21586405 21586421 chr3R 21586507 21586507 5 96 8.0 3.0 5.5 0.8 102 chr3R 21586405 intron InR - chr3R 21586456 intron InR - chr3R 21586507 intron InR - chr3R_5_21585001 chr3R_21585001 RAL-832 1600 chr3R 21586426 21586441 chr3R 21586504 21586545 5 94 3.5 2.5 3.0 1.2 119 chr3R 21586426 intron InR - chr3R 21586486 intron InR - chr3R 21586545 intron InR - chr3R_5_21585001 chr3R_21585001 RAL-832 1601 chr3R 21600251 21600276 chr3R 21600331 21600374 9 90 0.5 3.0 1.8 3.2 123 chr3R 21600251 intron InR - chr3R 21600312 intron InR - chr3R 21600374 intron InR - chr3R_9_21600001 chr3R_21600001 RAL-832 1602 chr3R 21725661 21725689 chr3R 21725810 21725845 17 153 0.5 0.5 0.5 11.3 184 chr3R 21725661 intergenic not near genes chr3R 21725753 intergenic not near genes chr3R 21725845 intergenic not near genes chr3R_17_21725001 chr3R_21725001 RAL-832 1603 chr3R 21784863 21784880 chr3R 21784969 21784970 6 102 4.5 0.0 2.2 1.9 107 chr3R 21784863 3` UTR,3` UTR CASK -,CRG - chr3R 21784916 3` UTR,3` UTR CASK -,CRG - chr3R 21784970 3` UTR,3` UTR CASK -,CRG - chr3R_6_21780001 chr3R_21780001 RAL-832 1604 chr3R 21785996 21786001 chr3R 21786083 21786103 5 97 4.0 4.0 4.0 1.0 107 chr3R 21785996 3` UTR,3` UTR CASK -,CRG - chr3R 21786050 3` UTR,3` UTR CASK -,CRG - chr3R 21786103 3` UTR,3` UTR CASK -,CRG - chr3R_5_21785001 chr3R_21785001 RAL-832 1605 chr3R 21907535 21907535 chr3R 28831801 28831801 6 6924266 7.5 5.0 6.2 0.8 6924266 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_6_25365001 chr3R_25365001 RAL-832 1606 chr3R 21907536 21907536 chr3R 28831801 28831802 11 6924266 7.0 5.0 6.0 1.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_11_25365001 chr3R_25365001 RAL-832 1607 chr3R 21989095 21989136 chr3R 21989234 21989250 5 136 4.5 0.0 2.2 1.6 155 chr3R 21989095 intron Eip93F + chr3R 21989172 intron Eip93F + chr3R 21989250 intron Eip93F + chr3R_5_21985001 chr3R_21985001 RAL-832 1608 chr3R 22234697 22234715 chr3R 22236011 22236045 pogo 8 1328 1.5 6.0 3.8 1.7 1348 chr3R 22234697 intron SKIP + chr3R 22235371 intron SKIP + chr3R 22236045 intron SKIP + chr3R_8_22235001 chr3R_22235001 RAL-832 1609 chr3R 22239480 22239495 chr3R 22248555 22248559 roo 5 9073 7.5 0.0 3.8 1.0 9079 chr3R 22239480 intron SKIP + chr3R 22244020 intron SKIP + chr3R 22248559 intron SKIP + chr3R_5_22240001 chr3R_22240001 RAL-832 1610 chr3R 22316754 22316795 chr3R 22317755 22317805 8 998 1.0 2.5 1.8 2.9 1051 chr3R 22316754 intron CG34377 - chr3R 22317280 intron CG34377 - chr3R 22317805 intron CG34377 - chr3R_8_22315001 chr3R_22315001 RAL-832 1611 chr3R 22336915 22336926 chr3R 22337017 22337027 6 101 1.0 4.0 2.5 1.7 112 chr3R 22336915 intron CG5388 - chr3R 22336971 intron CG5388 - chr3R 22337027 intron CG5388 - chr3R_6_22335001 chr3R_22335001 RAL-832 1612 chr3R 22348936 22348988 chr3R 22349312 22349344 6 368 2.5 4.0 3.2 1.4 408 chr3R 22348936 intergenic not near genes chr3R 22349140 intergenic not near genes chr3R 22349344 intergenic not near genes chr3R_6_22345001 chr3R_22345001 RAL-832 1613 chr3R 22421677 22421696 chr3R 22421775 22421799 6 99 0.5 4.0 2.2 1.9 122 chr3R 22421677 intron mats + chr3R 22421738 intron mats + chr3R 22421799 intron mats + chr3R_6_22420001 chr3R_22420001 RAL-832 1614 chr3R 22437780 22437819 chr3R 22437887 22437929 11 103 2.0 2.0 2.0 3.7 149 chr3R 22437780 intergenic not near genes chr3R 22437854 intergenic not near genes chr3R 22437929 intergenic not near genes chr3R_11_22435001 chr3R_22435001 RAL-832 1615 chr3R 22450540 22450575 chr3R 22453191 22453235 NOF 6 2648 2.5 6.5 4.5 1.1 2695 chr3R 22450540 intron CG34376 + chr3R 22451888 intron CG34376 + chr3R 22453235 intron CG34376 + chr3R_6_22450001 chr3R_22450001 RAL-832 1616 chr3R 22538462 22538472 chr3R 22538533 22538577 6 96 3.0 3.0 3.0 1.5 115 chr3R 22538462 intron CG5326 - chr3R 22538520 intron CG5326 - chr3R 22538577 intron CG5326 - chr3R_6_22535001 chr3R_22535001 RAL-832 1617 chr3R 22672283 22672331 chr3R 22672396 22672444 12 106 2.0 5.5 3.8 2.5 161 chr3R 22672283 intron wake + chr3R 22672364 intron wake + chr3R 22672444 intron wake + chr3R_12_22670001 chr3R_22670001 RAL-832 1618 chr3R 22769075 22769100 chr3R 22769171 22769181 6 85 4.0 2.0 3.0 1.5 106 chr3R 22769075 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769128 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769181 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_6_22765001 chr3R_22765001 RAL-832 1619 chr3R 22769105 22769126 chr3R 22769167 22769207 10 77 1.5 2.0 1.8 3.6 102 chr3R 22769105 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769156 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769207 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_10_22765001 chr3R_22765001 RAL-832 1620 chr3R 22797743 22797934 chr3R 22797849 22798050 12 104 0.5 0.5 0.5 8.0 307 chr3R 22797743 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798050 intergenic not near genes chr3R_12_22795001 chr3R_22795001 RAL-832 1621 chr3R 22804683 22804684 chr3R 22804745 22804771 5 76 7.0 1.0 4.0 1.0 88 chr3R 22804683 intron CG7031 + chr3R 22804727 intron CG7031 + chr3R 22804771 intron CG7031 + chr3R_5_22800001 chr3R_22800001 RAL-832 1622 chr3R 22842373 22842415 chr3R 22842492 22842529 7 115 2.0 4.0 3.0 1.8 156 chr3R 22842373 intergenic not near genes chr3R 22842451 intergenic not near genes chr3R 22842529 intergenic not near genes chr3R_7_22840001 chr3R_22840001 RAL-832 1623 chr3R 22861231 22861259 chr3R 22861333 22861372 6 104 4.5 6.0 5.2 1.0 141 chr3R 22861231 intergenic not near genes chr3R 22861302 intergenic not near genes chr3R 22861372 intergenic not near genes chr3R_6_22860001 chr3R_22860001 RAL-832 1624 chr3R 22880914 22880958 chr3R 22881072 22881116 6 158 1.5 2.5 2.0 2.0 202 chr3R 22880914 intergenic not near genes chr3R 22881015 intergenic not near genes chr3R 22881116 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-832 1625 chr3R 23064176 23064198 chr3R 23064281 23064306 5 107 1.5 1.5 1.5 2.0 130 chr3R 23064176 exon CG17111 - chr3R 23064241 intron CG17111 - chr3R 23064306 exon CG17111 - chr3R_5_23060001 chr3R_23060001 RAL-832 1626 chr3R 23064886 23064903 chr3R 23064974 23065014 7 104 0.0 5.5 2.8 1.8 128 chr3R 23064886 intron CG17111 - chr3R 23064950 intron CG17111 - chr3R 23065014 intron CG17111 - chr3R_7_23060001 chr3R_23060001 RAL-832 1627 chr3R 23210634 23210669 chr3R 23210727 23210754 11 99 6.5 4.0 5.2 1.8 120 chr3R 23210634 intron cnc - chr3R 23210694 intron cnc - chr3R 23210754 intron cnc - chr3R_11_23210001 chr3R_23210001 RAL-832 1628 chr3R 23346828 23346873 chr3R 23346925 23346971 6 98 1.0 4.5 2.8 1.6 143 chr3R 23346828 intergenic not near genes chr3R 23346900 intergenic not near genes chr3R 23346971 intergenic not near genes chr3R_6_23345001 chr3R_23345001 RAL-832 1629 chr3R 23558385 23558429 chr3R 23560186 23560212 Bari1 7 1787 2.0 2.5 2.2 2.2 1827 chr3R 23558385 intron beat-IV + chr3R 23559298 intron beat-IV + chr3R 23560212 intron beat-IV + chr3R_7_23555001 chr3R_23555001 RAL-832 1630 chr3R 23688465 23688496 chr3R 23688567 23688590 7 99 3.5 0.5 2.0 2.3 125 chr3R 23688465 intergenic SPE + chr3R 23688528 intergenic SPE +,CG10254 - chr3R 23688590 intergenic CG10254 -,SPE + chr3R_7_23685001 chr3R_23685001 RAL-832 1631 chr3R 23714059 23714082 chr3R 23714166 23714177 5 105 7.5 0.5 4.0 1.0 118 chr3R 23714059 intron nau - chr3R 23714118 intron nau - chr3R 23714177 intron nau - chr3R_5_23710001 chr3R_23710001 RAL-832 1632 chr3R 23851068 23851089 chr3R 23858754 23858776 opus 10 7686 4.0 12.5 8.2 1.1 7708 chr3R 23851068 3` UTR CG34355 + chr3R 23854922 intergenic not near genes chr3R 23858776 intergenic not near genes chr3R_10_23850001 chr3R_23850001 RAL-832 1633 chr3R 23888064 23888080 chr3R 23888170 23888186 6 104 9.5 1.5 5.5 0.9 122 chr3R 23888064 intron Pli - chr3R 23888125 intron Pli - chr3R 23888186 intron Pli - chr3R_6_23885001 chr3R_23885001 RAL-832 1634 chr3R 23888081 23888114 chr3R 23888167 23888213 12 100 1.5 1.5 1.5 4.8 132 chr3R 23888081 intron Pli - chr3R 23888147 intron Pli - chr3R 23888213 intron Pli - chr3R_12_23885001 chr3R_23885001 RAL-832 1635 chr3R 23949034 23949074 chr3R 23949126 23949171 9 95 1.0 3.5 2.2 2.8 137 chr3R 23949034 intergenic not near genes chr3R 23949102 intergenic not near genes chr3R 23949171 intergenic not near genes chr3R_9_23945001 chr3R_23945001 RAL-832 1636 chr3R 24011657 24011659 chr3R 24011760 24011762 4 103 5.5 7.0 6.2 0.6 105 chr3R 24011657 intron KrT95D - chr3R 24011710 intron KrT95D - chr3R 24011762 intron KrT95D - chr3R_4_24010001 chr3R_24010001 RAL-832 1637 chr3R 24021609 24021660 chr3R 24021719 24021747 12 107 3.0 3.0 3.0 3.0 138 chr3R 24021609 intron KrT95D - chr3R 24021678 intron KrT95D - chr3R 24021747 intron KrT95D - chr3R_12_24020001 chr3R_24020001 RAL-832 1638 chr3R 24076927 24076947 chr3R 24078380 24078419 hobo 7 1472 1.0 1.0 1.0 3.5 1492 chr3R 24076927 intron 4EHP - chr3R 24077673 intron 4EHP - chr3R 24078419 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-832 1639 chr3R 24207202 24207246 chr3R 24212298 24212336 flea 4 5091 2.0 6.5 4.2 0.8 5134 chr3R 24207202 intron twin - chr3R 24209769 intron twin - chr3R 24212336 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-832 1640 chr3R 24431599 24431624 chr3R 24431696 24431722 5 98 5.0 4.5 4.8 0.9 123 chr3R 24431599 intron nAChRalpha1 - chr3R 24431660 intron nAChRalpha1 - chr3R 24431722 intron nAChRalpha1 - chr3R_5_24430001 chr3R_24430001 RAL-832 1641 chr3R 24493267 24493310 chr3R 24493517 24493550 BS 8 243 3.5 2.5 3.0 2.0 283 chr3R 24493267 intergenic not near genes chr3R 24493408 intergenic not near genes chr3R 24493550 intergenic not near genes chr3R_8_24490001 chr3R_24490001 RAL-832 1642 chr3R 24527795 24527836 chr3R 24527892 24527936 8 106 3.5 2.5 3.0 2.0 141 chr3R 24527795 intergenic CG6607 +,CG13618 + chr3R 24527866 intergenic CG6607 +,CG13618 + chr3R 24527936 intergenic CG6607 +,CG13618 + chr3R_8_24525001 chr3R_24525001 RAL-832 1643 chr3R 24573061 24573085 chr3R 24573188 24573223 7 131 0.0 3.0 1.5 2.8 162 chr3R 24573061 intron CG13624 - chr3R 24573142 intron CG13624 - chr3R 24573223 intron CG13624 - chr3R_7_24570001 chr3R_24570001 RAL-832 1644 chr3R 24667616 24667622 chr3R 24667688 24667689 4 83 4.0 0.5 2.2 1.2 73 chr3R 24667616 intron slo + chr3R 24667652 intron slo + chr3R 24667689 intron slo + chr3R_4_24665001 chr3R_24665001 RAL-832 1645 chr3R 24670038 24670195 chr3R 24670168 24670293 9 120 0.0 0.0 0.0 9.0 255 chr3R 24670038 intron slo + chr3R 24670166 intron slo + chr3R 24670293 intron slo + chr3R_9_24670001 chr3R_24670001 RAL-832 1646 chr3R 24741085 24741114 chr3R 24741195 24741220 6 120 2.0 2.5 2.2 1.9 135 chr3R 24741085 intron tok + chr3R 24741152 intron tok + chr3R 24741220 intron tok + chr3R_6_24740001 chr3R_24740001 RAL-832 1647 chr3R 24785068 24785076 chr3R 24785157 24785172 7 93 13.0 5.0 9.0 0.7 104 chr3R 24785068 3` UTR CG5805 - chr3R 24785120 3` UTR CG5805 - chr3R 24785172 3` UTR CG5805 - chr3R_7_24785001 chr3R_24785001 RAL-832 1648 chr3R 24785078 24785111 chr3R 24785154 24785179 9 78 5.0 4.0 4.5 1.6 101 chr3R 24785078 3` UTR CG5805 - chr3R 24785128 3` UTR CG5805 - chr3R 24785179 3` UTR CG5805 - chr3R_9_24785001 chr3R_24785001 RAL-832 1649 chr3R 24815451 24815494 chr3R 24815776 24815792 6 316 3.0 3.5 3.2 1.4 341 chr3R 24815451 exon CG5808 - chr3R 24815622 exon CG5808 - chr3R 24815792 exon CG5808 - chr3R_6_24815001 chr3R_24815001 RAL-832 1650 chr3R 24927120 24927160 chr3R 24931916 24931941 Doc 11 4801 3.0 1.5 2.2 3.4 4821 chr3R 24927120 intergenic Trf4-2 + chr3R 24929530 intergenic not near genes chr3R 24931941 intergenic CG11771 + chr3R_11_24925001 chr3R_24925001 RAL-832 1651 chr3R 24974895 24974928 chr3R 24974994 24975027 6 98 2.5 3.0 2.8 1.6 132 chr3R 24974895 intergenic not near genes chr3R 24974961 intergenic not near genes chr3R 24975027 intergenic not near genes chr3R_6_24970001 chr3R_24970001 RAL-832 1652 chr3R 25053104 25053165 chr3R 25053216 25053249 6 93 0.0 4.0 2.0 2.0 145 chr3R 25053104 intergenic CG11791 +,CG31109 - chr3R 25053176 intergenic CG11791 +,CG31109 - chr3R 25053249 intergenic CG31109 -,CG11791 + chr3R_6_25050001 chr3R_25050001 RAL-832 1653 chr3R 25072739 25072787 chr3R 25072851 25072899 13 109 5.5 4.0 4.8 2.2 160 chr3R 25072739 3` UTR CG9996 - chr3R 25072819 3` UTR CG9996 - chr3R 25072899 exon CG9996 - chr3R_13_25070001 chr3R_25070001 RAL-832 1654 chr3R 25186386 25186429 chr3R 25186489 25186531 16 103 4.5 2.5 3.5 3.6 145 chr3R 25186386 intron,intron lobo -,dan + chr3R 25186458 intron,intron lobo -,dan + chr3R 25186531 intron,intron lobo -,dan + chr3R_16_25185001 chr3R_25185001 RAL-832 1655 chr3R 25269655 25269680 chr3R 25269908 25269950 4 266 1.0 2.0 1.5 1.6 295 chr3R 25269655 intron CR45214 - chr3R 25269802 intron CR45214 - chr3R 25269950 3` UTR CR45214 - chr3R_4_25265001 chr3R_25265001 RAL-832 1656 chr3R 25288261 25288285 chr3R 25288519 25288549 11 263 4.5 4.0 4.2 2.1 288 chr3R 25288261 exon CG13658 + chr3R 25288405 exon CG13658 + chr3R 25288549 exon CG13658 + chr3R_11_25285001 chr3R_25285001 RAL-832 1657 chr3R 25288291 25288295 chr3R 25288516 25288562 4 252 4.5 3.5 4.0 0.8 271 chr3R 25288291 exon CG13658 + chr3R 25288426 exon CG13658 + chr3R 25288562 exon CG13658 + chr3R_4_25285001 chr3R_25285001 RAL-832 1658 chr3R 25368479 25368487 chr3R 25368610 25368623 4 133 2.5 0.0 1.2 1.8 144 chr3R 25368479 intron Fur1 - chr3R 25368551 intron Fur1 - chr3R 25368623 intron Fur1 - chr3R_4_25365001 chr3R_25365001 RAL-832 1659 chr3R 25431424 25431439 chr3R 25431530 25431538 8 102 2.5 1.5 2.0 2.7 114 chr3R 25431424 intron Fur1 - chr3R 25431481 intron Fur1 - chr3R 25431538 intron Fur1 - chr3R_8_25430001 chr3R_25430001 RAL-832 1660 chr3R 25431441 25431447 chr3R 25431529 25431550 4 101 2.0 1.5 1.8 1.4 109 chr3R 25431441 intron Fur1 - chr3R 25431496 intron Fur1 - chr3R 25431550 intron Fur1 - chr3R_4_25430001 chr3R_25430001 RAL-832 1661 chr3R 25528019 25528037 chr3R 25528142 25528145 5 118 7.0 3.5 5.2 0.8 126 chr3R 25528019 intron msi + chr3R 25528082 intron msi + chr3R 25528145 intron msi + chr3R_5_25525001 chr3R_25525001 RAL-832 1662 chr3R 7773344 7773344 chr3R 25538124 25538124 14 17764780 15.0 10.5 12.8 1.0 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_14_16655001 chr3R_16655001 RAL-832 1663 chr3R 25614877 25614915 chr3R 25615162 25615200 9 281 1.0 3.5 2.2 2.8 323 chr3R 25614877 intron Npl4 - chr3R 25615038 intron Npl4 - chr3R 25615200 intron Npl4 - chr3R_9_25615001 chr3R_25615001 RAL-832 1664 chr3R 25652300 25652349 chr3R 25652397 25652432 12 92 1.0 4.0 2.5 3.4 132 chr3R 25652300 intergenic not near genes chr3R 25652366 intergenic not near genes chr3R 25652432 intergenic not near genes chr3R_12_25650001 chr3R_25650001 RAL-832 1665 chr3R 25725811 25725862 chr3R 25734991 25735022 roo 8 9178 2.5 7.0 4.8 1.4 9211 chr3R 25725811 intron LpR2 - chr3R 25730416 intron LpR2 - chr3R 25735022 intron LpR2 - chr3R_8_25730001 chr3R_25730001 RAL-832 1666 chr3R 25738641 25738664 chr3R 25738724 25738772 11 100 1.5 2.5 2.0 3.7 131 chr3R 25738641 intron LpR2 - chr3R 25738706 intron LpR2 - chr3R 25738772 intron LpR2 - chr3R_11_25735001 chr3R_25735001 RAL-832 1667 chr3R 25843615 25843668 chr3R 25843765 25843818 20 147 2.5 4.5 3.5 4.4 203 chr3R 25843615 intergenic CR45653 + chr3R 25843716 intergenic CR45653 + chr3R 25843818 intergenic CR45653 + chr3R_20_25840001 chr3R_25840001 RAL-832 1668 chr3R 25867776 25867815 chr3R 25867972 25868011 9 194 1.5 4.0 2.8 2.4 235 chr3R 25867776 intron CG5890 + chr3R 25867894 intron CG5890 + chr3R 25868011 intron CG5890 + chr3R_9_25865001 chr3R_25865001 RAL-832 1669 chr3R 26180061 26180104 chr3R 26180468 26180468 10 404 2.0 6.5 4.2 1.9 407 chr3R 26180061 intron CG31323 + chr3R 26180264 intron CG31323 + chr3R 26180468 intron CG31323 + chr3R_10_26180001 chr3R_26180001 RAL-832 1670 chr3R 26247261 26247274 chr3R 26247408 26247431 4 148 3.0 7.0 5.0 0.7 170 chr3R 26247261 intron CR42745 + chr3R 26247346 intron CR42745 + chr3R 26247431 intron CR42745 + chr3R_4_26245001 chr3R_26245001 RAL-832 1671 chr3R 26284213 26284243 chr3R 26284342 26284365 4 126 0.0 2.5 1.2 1.8 152 chr3R 26284213 intergenic not near genes chr3R 26284289 intergenic not near genes chr3R 26284365 intergenic not near genes chr3R_4_26280001 chr3R_26280001 RAL-832 1672 chr3R 26292101 26292125 chr3R 26292190 26292222 6 97 3.0 4.0 3.5 1.3 121 chr3R 26292101 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292222 intergenic not near genes chr3R_6_26290001 chr3R_26290001 RAL-832 1673 chr3R 26294711 26294749 chr3R 26294794 26294812 6 86 2.5 2.5 2.5 1.7 101 chr3R 26294711 intergenic not near genes chr3R 26294762 intergenic not near genes chr3R 26294812 intergenic not near genes chr3R_6_26290001 chr3R_26290001 RAL-832 1674 chr3R 26365124 26365143 chr3R 26365198 26365237 5 95 4.0 1.5 2.8 1.3 113 chr3R 26365124 intergenic not near genes chr3R 26365180 intergenic not near genes chr3R 26365237 intergenic not near genes chr3R_5_26365001 chr3R_26365001 RAL-832 1675 chr3R 26386902 26386915 chr3R 26386978 26387013 6 92 2.0 4.5 3.2 1.4 111 chr3R 26386902 intergenic not near genes chr3R 26386958 intergenic not near genes chr3R 26387013 intergenic not near genes chr3R_6_26385001 chr3R_26385001 RAL-832 1676 chr3R 26485900 26485921 chr3R 26486009 26486050 6 117 1.5 3.0 2.2 1.9 150 chr3R 26485900 intron plum - chr3R 26485975 intron plum - chr3R 26486050 intron plum - chr3R_6_26485001 chr3R_26485001 RAL-832 1677 chr3R 26510260 26510282 chr3R 26510362 26510377 5 104 1.0 4.0 2.5 1.4 117 chr3R 26510260 intron plum - chr3R 26510318 intron plum - chr3R 26510377 intron plum - chr3R_5_26510001 chr3R_26510001 RAL-832 1678 chr3R 26577488 26577524 chr3R 26577578 26577620 5 90 2.5 4.0 3.2 1.2 132 chr3R 26577488 intron scrib + chr3R 26577554 intron scrib + chr3R 26577620 intron scrib + chr3R_5_26575001 chr3R_26575001 RAL-832 1679 chr3R 26642736 26642754 chr3R 26643124 26643142 jockey 7 405 4.5 3.5 4.0 1.4 406 chr3R 26642736 intergenic not near genes chr3R 26642939 intergenic not near genes chr3R 26643142 intergenic not near genes chr3R_7_26640001 chr3R_26640001 RAL-832 1680 chr3R 26810538 26810578 chr3R 26811043 26811083 roo 9 501 6.0 3.5 4.8 1.6 545 chr3R 26810538 intron Tl + chr3R 26810810 intron Tl + chr3R 26811083 intron Tl + chr3R_9_26810001 chr3R_26810001 RAL-832 1681 chr3R 26901492 26901526 chr3R 26901597 26901631 5 105 7.0 0.0 3.5 1.1 139 chr3R 26901492 intron T48 + chr3R 26901562 intron T48 + chr3R 26901631 intron T48 + chr3R_5_26900001 chr3R_26900001 RAL-832 1682 chr3R 27007397 27007434 chr3R 27016541 27016586 roo 11 9144 2.5 3.5 3.0 2.8 9189 chr3R 27007397 intron RYa-R + chr3R 27011992 intron RYa-R + chr3R 27016586 intron RYa-R + chr3R_11_27010001 chr3R_27010001 RAL-832 1683 chr3R 27027665 27027704 chr3R 27027768 27027791 5 100 2.0 1.5 1.8 1.8 126 chr3R 27027665 intron RYa-R + chr3R 27027728 intron RYa-R + chr3R 27027791 intron RYa-R + chr3R_5_27025001 chr3R_27025001 RAL-832 1684 chr3R 27028719 27028754 chr3R 27028818 27028847 9 91 3.5 3.5 3.5 2.0 128 chr3R 27028719 intron RYa-R + chr3R 27028783 intron RYa-R + chr3R 27028847 intron RYa-R + chr3R_9_27025001 chr3R_27025001 RAL-832 1685 chr3R 27140501 27140545 chr3R 27148131 27148142 412 6 7614 2.5 4.5 3.5 1.3 7641 chr3R 27140501 intron CG6051 - chr3R 27144322 intron CG6051 - chr3R 27148142 intron CG6051 - chr3R_6_27140001 chr3R_27140001 RAL-832 1686 chr3R 27315987 27316002 chr3R 27316083 27316087 7 93 4.0 1.0 2.5 2.0 100 chr3R 27315987 intron CG3339 - chr3R 27316037 intron CG3339 - chr3R 27316087 exon CG3339 - chr3R_7_27315001 chr3R_27315001 RAL-832 1687 chr3R 27329460 27329497 chr3R 27329556 27329594 12 92 2.5 5.0 3.8 2.5 134 chr3R 27329460 intergenic CG3330 - chr3R 27329527 intergenic CG3330 - chr3R 27329594 intergenic CG3330 - chr3R_12_27325001 chr3R_27325001 RAL-832 1688 chr3R 27342780 27342826 chr3R 27351374 27351391 Tirant 7 8592 1.0 1.5 1.2 3.2 8611 chr3R 27342780 intron CG42534 + chr3R 27347086 intron CG42534 + chr3R 27351391 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-832 1689 chr3R 27398032 27398054 chr3R 27398130 27398171 7 100 1.5 0.5 1.0 3.5 139 chr3R 27398032 intron side - chr3R 27398102 intron side - chr3R 27398171 intron side - chr3R_7_27395001 chr3R_27395001 RAL-832 1690 chr3R 27448869 27448877 chr3R 27448955 27448968 4 89 2.5 2.0 2.2 1.2 99 chr3R 27448869 intergenic not near genes chr3R 27448918 intergenic not near genes chr3R 27448968 intergenic not near genes chr3R_4_27445001 chr3R_27445001 RAL-832 1691 chr3R 27492359 27492409 chr3R 27492466 27492486 12 97 0.5 1.0 0.8 6.7 127 chr3R 27492359 intergenic not near genes chr3R 27492422 intergenic not near genes chr3R 27492486 intergenic not near genes chr3R_12_27490001 chr3R_27490001 RAL-832 1692 chr3R 27514654 27514702 chr3R 27514797 27514829 5 132 1.5 0.5 1.0 2.5 175 chr3R 27514654 intergenic not near genes chr3R 27514742 intergenic not near genes chr3R 27514829 intergenic not near genes chr3R_5_27510001 chr3R_27510001 RAL-832 1693 chr3R 27521141 27521159 chr3R 27530370 27530388 roo 8 9228 5.5 6.0 5.8 1.2 9247 chr3R 27521141 intron CG12885 + chr3R 27525764 intron CG12885 + chr3R 27530388 intron CG12885 + chr3R_8_27525001 chr3R_27525001 RAL-832 1694 chr3R 27521162 27521191 chr3R 27530366 27530404 roo 18 9224 0.5 5.0 2.8 4.7 9242 chr3R 27521162 intron CG12885 + chr3R 27525783 intron CG12885 + chr3R 27530404 intron CG12885 + chr3R_18_27525001 chr3R_27525001 RAL-832 1695 chr3R 27705379 27705390 chr3R 27705436 27705465 4 71 0.5 1.0 0.8 2.2 86 chr3R 27705379 exon CG12428 - chr3R 27705422 intron CG12428 - chr3R 27705465 exon CG12428 - chr3R_4_27705001 chr3R_27705001 RAL-832 1696 chr3R 27725549 27725600 chr3R 27731011 27731014 I-element 9 5454 3.0 1.0 2.0 3.0 5465 chr3R 27725549 intergenic not near genes chr3R 27728282 intergenic not near genes chr3R 27731014 intergenic not near genes chr3R_9_27725001 chr3R_27725001 RAL-832 1697 chr3R 27799916 27799963 chr3R 27800018 27800065 9 99 4.0 3.0 3.5 2.0 149 chr3R 27799916 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800065 intron CG34353 - chr3R_9_27795001 chr3R_27795001 RAL-832 1698 chr3R 27841101 27841131 chr3R 27841197 27841226 5 96 1.5 2.5 2.0 1.7 125 chr3R 27841101 intron CG34353 - chr3R 27841164 intron CG34353 - chr3R 27841226 intron CG34353 - chr3R_5_27840001 chr3R_27840001 RAL-832 1699 chr3R 27856762 27856788 chr3R 27858263 27858281 hopper2 4 1500 3.5 2.5 3.0 1.0 1519 chr3R 27856762 intron CG34353 - chr3R 27857522 intron CG34353 - chr3R 27858281 intron CG34353 - chr3R_4_27855001 chr3R_27855001 RAL-832 1700 chr3R 27862962 27862984 chr3R 27868265 27868309 Transpac 5 5316 3.5 1.5 2.5 1.4 5347 chr3R 27862962 intron CG34353 - chr3R 27865636 intron CG34353 - chr3R 27868309 intron CG34353 - chr3R_5_27865001 chr3R_27865001 RAL-832 1701 chr3R 27875698 27875729 chr3R 27882758 27882759 297 14 7064 3.0 6.0 4.5 2.5 7061 chr3R 27875698 intron CG34353 - chr3R 27879228 intron CG34353 - chr3R 27882759 intron CG34353 - chr3R_14_27875001 chr3R_27875001 RAL-832 1702 chr3R 27894930 27894961 chr3R 27895038 27895047 10 104 2.0 3.0 2.5 2.9 117 chr3R 27894930 intron CG34353 - chr3R 27894988 intron CG34353 - chr3R 27895047 intron CG34353 - chr3R_10_27890001 chr3R_27890001 RAL-832 1703 chr3R 27953352 27953375 chr3R 27953495 27953527 4 143 3.5 1.0 2.2 1.2 175 chr3R 27953352 intron CG4951 - chr3R 27953440 intron CG4951 - chr3R 27953527 exon CG4951 - chr3R_4_27950001 chr3R_27950001 RAL-832 1704 chr3R 28068486 28068514 chr3R 28073937 28073946 I-element 4 5449 1.5 0.5 1.0 2.0 5460 chr3R 28068486 intron CG34362 + chr3R 28071216 intron CG34362 + chr3R 28073946 intron CG34362 + chr3R_4_28070001 chr3R_28070001 RAL-832 1705 chr3R 28173654 28173701 chr3R 28181104 28181151 mdg1 12 7445 2.5 6.0 4.2 2.3 7497 chr3R 28173654 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181151 intron CG34354 + chr3R_12_28175001 chr3R_28175001 RAL-832 1706 chr3R 28253338 28253371 chr3R 28255854 28255880 jockey 8 2512 3.0 4.0 3.5 1.8 2542 chr3R 28253338 intergenic not near genes chr3R 28254609 intergenic not near genes chr3R 28255880 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-832 1707 chr3R 28302090 28302135 chr3R 28302545 28302577 jockey 13 454 4.0 9.0 6.5 1.7 487 chr3R 28302090 intergenic not near genes chr3R 28302334 intergenic not near genes chr3R 28302577 intergenic not near genes chr3R_13_28300001 chr3R_28300001 RAL-832 1708 chr3R 28331489 28331525 chr3R 28331588 28331608 15 96 6.0 4.0 5.0 2.5 119 chr3R 28331489 intron larp - chr3R 28331548 intron larp - chr3R 28331608 intron larp - chr3R_15_28330001 chr3R_28330001 RAL-832 1709 chr3R 28345629 28345645 chr3R 28345725 28345741 4 96 9.0 2.0 5.5 0.6 112 chr3R 28345629 intergenic Moca-cyp + chr3R 28345685 intergenic not near genes chr3R 28345741 intergenic not near genes chr3R_4_28345001 chr3R_28345001 RAL-832 1710 chr3R 28345653 28345670 chr3R 28345724 28345766 4 83 5.5 1.5 3.5 0.9 113 chr3R 28345653 intergenic Moca-cyp + chr3R 28345710 intergenic not near genes chr3R 28345766 intergenic not near genes chr3R_4_28345001 chr3R_28345001 RAL-832 1711 chr3R 28393677 28393719 chr3R 28393797 28393831 10 117 1.0 5.0 3.0 2.5 154 chr3R 28393677 intergenic not near genes chr3R 28393754 intergenic not near genes chr3R 28393831 intergenic not near genes chr3R_10_28390001 chr3R_28390001 RAL-832 1712 chr3R 28478471 28478521 chr3R 28478567 28478603 4 92 0.0 0.5 0.2 3.3 132 chr3R 28478471 intergenic not near genes chr3R 28478537 intergenic not near genes chr3R 28478603 intergenic not near genes chr3R_4_28475001 chr3R_28475001 RAL-832 1713 chr3R 28479144 28479168 chr3R 28479254 28479285 9 114 1.5 3.0 2.2 2.8 141 chr3R 28479144 intergenic not near genes chr3R 28479214 intergenic not near genes chr3R 28479285 intergenic not near genes chr3R_9_28475001 chr3R_28475001 RAL-832 1714 chr3R 28616463 28616488 chr3R 28616567 28616599 7 109 0.0 2.0 1.0 3.5 136 chr3R 28616463 intron CG10011 - chr3R 28616531 intron CG10011 - chr3R 28616599 intron CG10011 - chr3R_7_28615001 chr3R_28615001 RAL-832 1715 chr3R 28638912 28638951 chr3R 28640205 28640253 5 1294 20.0 10.0 15.0 0.3 1341 chr3R 28638912 intergenic CG9988 + chr3R 28639582 intergenic not near genes chr3R 28640253 intergenic not near genes chr3R_5_28635001 chr3R_28635001 RAL-832 1716 chr3R 28763902 28763905 chr3R 28771365 28771368 Stalker4 4 7463 0.0 6.5 3.2 1.0 7466 chr3R 28763902 intergenic not near genes chr3R 28767635 intergenic not near genes chr3R 28771368 intergenic not near genes chr3R_4_28765001 chr3R_28765001 RAL-832 1717 chr3R 21907534 21907535 chr3R 28831801 28831802 9 6924266 7.5 5.0 6.2 1.2 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_9_25365001 chr3R_25365001 RAL-832 1718 chr3R 28960497 28960528 chr3R 28960602 28960623 9 98 4.5 4.5 4.5 1.6 126 chr3R 28960497 intron CG14521 - chr3R 28960560 intron CG14521 - chr3R 28960623 intron CG14521 - chr3R_9_28960001 chr3R_28960001 RAL-832 1719 chr3R 28985050 28985090 chr3R 28985172 28985214 7 123 0.5 3.5 2.0 2.3 164 chr3R 28985050 intergenic not near genes chr3R 28985132 intergenic not near genes chr3R 28985214 intergenic not near genes chr3R_7_28985001 chr3R_28985001 RAL-832 1720 chr3R 29054017 29054049 chr3R 29054097 29054145 9 84 4.0 3.5 3.8 1.9 128 chr3R 29054017 intergenic CG11842 +,CG11843 + chr3R 29054081 intergenic CG11842 +,CG11843 + chr3R 29054145 intergenic CG11843 +,CG11842 + chr3R_9_29050001 chr3R_29050001 RAL-832 1721 chr3R 29070035 29070079 chr3R 29070136 29070180 17 98 6.0 3.5 4.8 2.9 145 chr3R 29070035 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070180 intron CG11873 + chr3R_17_29070001 chr3R_29070001 RAL-832 1722 chr3R 29079368 29079410 chr3R 29080760 29080784 NOF 16 1391 3.5 3.5 3.5 3.6 1416 chr3R 29079368 intron CG11873 + chr3R 29080076 intron CG11873 + chr3R 29080784 intron CG11873 + chr3R_16_29080001 chr3R_29080001 RAL-832 1723 chr3R 29213045 29213081 chr3R 29213146 29213163 8 98 4.5 2.5 3.5 1.8 118 chr3R 29213045 intergenic not near genes chr3R 29213104 intergenic not near genes chr3R 29213163 intergenic not near genes chr3R_8_29210001 chr3R_29210001 RAL-832 1724 chr3R 29237269 29237283 chr3R 29239300 29239300 4 2028 10.5 3.5 7.0 0.5 2031 chr3R 29237269 exon CG11951 - chr3R 29238284 intron CG11951 - chr3R 29239300 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-832 1725 chr3R 29240455 29240503 chr3R 29240554 29240607 11 103 1.0 9.0 5.0 1.8 152 chr3R 29240455 intergenic CG31427 -,CG31445 - chr3R 29240531 intergenic CG31445 -,CG31427 - chr3R 29240607 3` UTR CG31445 - chr3R_11_29240001 chr3R_29240001 RAL-832 1726 chr3R 29256266 29256275 chr3R 29256338 29256379 4 96 0.5 4.5 2.5 1.1 113 chr3R 29256266 intergenic CG45544 +,stg - chr3R 29256322 intergenic CG45544 + chr3R 29256379 intergenic CG45544 + chr3R_4_29255001 chr3R_29255001 RAL-832 1727 chr3R 29332262 29332299 chr3R 29332359 29332396 6 94 1.5 0.0 0.8 3.3 134 chr3R 29332262 intergenic not near genes chr3R 29332329 intergenic not near genes chr3R 29332396 intergenic not near genes chr3R_6_29330001 chr3R_29330001 RAL-832 1728 chr3R 29402964 29403004 chr3R 29403079 29403116 14 113 1.0 4.0 2.5 4.0 152 chr3R 29402964 intron Ptp99A + chr3R 29403040 intron Ptp99A + chr3R 29403116 intron Ptp99A + chr3R_14_29400001 chr3R_29400001 RAL-832 1729 chr3R 29406618 29406642 chr3R 29407898 29407900 jockey 5 1288 1.5 2.0 1.8 1.8 1282 chr3R 29406618 intron Ptp99A + chr3R 29407259 intron Ptp99A + chr3R 29407900 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-832 1730 chr3R 29449348 29449390 chr3R 29449446 29449466 8 92 4.0 8.5 6.2 1.1 118 chr3R 29449348 intron Ptp99A + chr3R 29449407 intron Ptp99A + chr3R 29449466 intron Ptp99A + chr3R_8_29445001 chr3R_29445001 RAL-832 1731 chr3R 29472011 29472033 chr3R 29472104 29472127 6 102 3.5 1.5 2.5 1.7 116 chr3R 29472011 intron Ptp99A + chr3R 29472069 intron Ptp99A + chr3R 29472127 intron Ptp99A + chr3R_6_29470001 chr3R_29470001 RAL-832 1732 chr3R 29526213 29526237 chr3R 29526319 29526336 5 100 4.0 3.0 3.5 1.1 123 chr3R 29526213 intergenic not near genes chr3R 29526274 intergenic not near genes chr3R 29526336 intergenic not near genes chr3R_5_29525001 chr3R_29525001 RAL-832 1733 chr3R 29738272 29738280 chr3R 29739732 29739755 hobo 6 1473 3.5 3.5 3.5 1.3 1483 chr3R 29738272 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739755 5` UTR CG1969 + chr3R_6_29735001 chr3R_29735001 RAL-832 1734 chr3R 29758935 29758970 chr3R 29759015 29759068 9 89 1.0 5.5 3.2 2.1 133 chr3R 29758935 3` UTR CR44953 - chr3R 29759002 3` UTR CR44953 - chr3R 29759068 intergenic CR44953 - chr3R_9_29755001 chr3R_29755001 RAL-832 1735 chr3R 29760356 29760392 chr3R 29761567 29761613 pogo 7 1216 3.0 4.0 3.5 1.6 1257 chr3R 29760356 intergenic not near genes chr3R 29760984 intergenic not near genes chr3R 29761613 intergenic not near genes chr3R_7_29760001 chr3R_29760001 RAL-832 1736 chr3R 29768457 29768602 chr3R 29768569 29768679 9 105 0.0 0.0 0.0 9.0 222 chr3R 29768457 intron kay + chr3R 29768568 intron kay + chr3R 29768679 intron kay + chr3R_9_29765001 chr3R_29765001 RAL-832 1737 chr3R 29773885 29773901 chr3R 29773971 29773982 5 88 3.0 0.0 1.5 2.0 97 chr3R 29773885 intron kay + chr3R 29773934 intron kay + chr3R 29773982 intron kay + chr3R_5_29770001 chr3R_29770001 RAL-832 1738 chr3R 29854846 29854858 chr3R 29854928 29854937 6 88 3.0 8.0 5.5 0.9 91 chr3R 29854846 3` UTR dgt1 - chr3R 29854892 exon dgt1 - chr3R 29854937 exon dgt1 - chr3R_6_29850001 chr3R_29850001 RAL-832 1739 chr3R 29882002 29882013 chr3R 29891179 29891190 roo 4 9176 8.5 5.0 6.8 0.5 9188 chr3R 29882002 intron CG31038 + chr3R 29886596 intron CG31038 + chr3R 29891190 intron CG31038 + chr3R_4_29885001 chr3R_29885001 RAL-832 1740 chr3R 29882016 29882053 chr3R 29891176 29891222 roo 13 9168 4.5 4.5 4.5 2.4 9206 chr3R 29882016 intron CG31038 + chr3R 29886619 intron CG31038 + chr3R 29891222 intron CG31038 + chr3R_13_29885001 chr3R_29885001 RAL-832 1741 chr3R 29949561 29949616 chr3R 29949660 29949705 8 93 2.0 2.5 2.2 2.5 144 chr3R 29949561 intergenic not near genes chr3R 29949633 intergenic not near genes chr3R 29949705 intergenic not near genes chr3R_8_29945001 chr3R_29945001 RAL-832 1742 chr3R 30032159 30032187 chr3R 30032242 30032257 4 81 1.5 5.5 3.5 0.9 98 chr3R 30032159 intron Axn + chr3R 30032208 intron Axn + chr3R 30032257 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-832 1743 chr3R 30077908 30077939 chr3R 30077990 30078046 5 95 2.0 3.5 2.8 1.3 138 chr3R 30077908 intron sima + chr3R 30077977 intron sima + chr3R 30078046 intron sima + chr3R_5_30075001 chr3R_30075001 RAL-832 1744 chr3R 30084865 30084883 chr3R 30086316 30086335 hobo 4 1464 0.0 2.0 1.0 2.0 1470 chr3R 30084865 intron sima + chr3R 30085600 intron sima + chr3R 30086335 intron sima + chr3R_4_30085001 chr3R_30085001 RAL-832 1745 chr3R 30175680 30175724 chr3R 30175783 30175807 8 101 4.5 2.0 3.2 1.9 127 chr3R 30175680 intergenic CG1983 - chr3R 30175744 intergenic CG1983 - chr3R 30175807 3` UTR CG1983 - chr3R_8_30175001 chr3R_30175001 RAL-832 1746 chr3R 30238741 30238793 chr3R 30239925 30239976 1360 15 1179 5.0 4.0 4.5 2.7 1235 chr3R 30238741 intergenic not near genes chr3R 30239358 intergenic not near genes chr3R 30239976 intergenic not near genes chr3R_15_30235001 chr3R_30235001 RAL-832 1747 chr3R 30375533 30375568 chr3R 30383171 30383211 412 5 7639 3.5 1.0 2.2 1.6 7678 chr3R 30375533 intergenic not near genes chr3R 30379372 intergenic not near genes chr3R 30383211 intergenic not near genes chr3R_5_30375001 chr3R_30375001 RAL-832 1748 chr3R 30396198 30396247 chr3R 30404484 30404533 roo 14 8283 2.5 2.5 2.5 4.0 8335 chr3R 30396198 intergenic not near genes chr3R 30400366 intergenic not near genes chr3R 30404533 5` UTR CR45570 + chr3R_14_30400001 chr3R_30400001 RAL-832 1749 chr3R 30462274 30462293 chr3R 30462845 30462875 8 572 2.0 1.5 1.8 2.9 601 chr3R 30462274 intron CDase + chr3R 30462574 intron CDase + chr3R 30462875 exon CDase + chr3R_8_30460001 chr3R_30460001 RAL-832 1750 chr3R 30485046 30485048 chr3R 30485142 30485144 4 96 5.0 3.0 4.0 0.8 98 chr3R 30485046 intron PH4alphaEFB + chr3R 30485095 intron PH4alphaEFB + chr3R 30485144 intron PH4alphaEFB + chr3R_4_30485001 chr3R_30485001 RAL-832 1751 chr3R 30488103 30488148 chr3R 30488202 30488215 8 94 0.0 0.0 0.0 8.0 112 chr3R 30488103 intergenic Jon99Fii - chr3R 30488159 intergenic Jon99Fii - chr3R 30488215 intergenic Jon99Fii - chr3R_8_30485001 chr3R_30485001 RAL-832 1752 chr3R 30548995 30549039 chr3R 30549106 30549135 15 107 2.5 6.5 4.5 2.7 140 chr3R 30548995 intron tmod + chr3R 30549065 intron tmod + chr3R 30549135 intron tmod + chr3R_15_30545001 chr3R_30545001 RAL-832 1753 chr3R 30571681 30571715 chr3R 30571781 30571815 12 99 0.0 1.5 0.8 6.7 134 chr3R 30571681 intron tmod + chr3R 30571748 intron tmod + chr3R 30571815 exon tmod + chr3R_12_30570001 chr3R_30570001 RAL-832 1754 chr3R 30591316 30591338 chr3R 30591434 30591459 7 120 0.0 4.0 2.0 2.3 143 chr3R 30591316 intergenic not near genes chr3R 30591388 intergenic not near genes chr3R 30591459 intergenic not near genes chr3R_7_30590001 chr3R_30590001 RAL-832 1755 chr3R 30602714 30602750 chr3R 30602960 30602996 10 243 1.5 2.0 1.8 3.6 282 chr3R 30602714 exon CG31021 + chr3R 30602855 exon CG31021 + chr3R 30602996 intron CG31021 + chr3R_10_30600001 chr3R_30600001 RAL-832 1756 chr3R 30620916 30620941 chr3R 30621084 30621091 10 164 0.5 2.0 1.2 4.5 175 chr3R 30620916 intron CG44954 - chr3R 30621004 intron CG44954 - chr3R 30621091 intron CG44954 - chr3R_10_30620001 chr3R_30620001 RAL-832 1757 chr3R 30679497 30679551 chr3R 30686986 30687017 blood 11 7483 2.5 2.5 2.5 3.1 7520 chr3R 30679497 intergenic not near genes chr3R 30683257 intergenic not near genes chr3R 30687017 intergenic not near genes chr3R_11_30680001 chr3R_30680001 RAL-832 1758 chr3R 30973129 30973167 chr3R 30973295 30973327 9 168 1.0 3.5 2.2 2.8 198 chr3R 30973129 intron 5-HT7 - chr3R 30973228 intron 5-HT7 - chr3R 30973327 intron 5-HT7 - chr3R_9_30970001 chr3R_30970001 RAL-832 1759 chr3R 31042113 31042142 chr3R 31042203 31042248 5 99 1.5 4.0 2.8 1.3 135 chr3R 31042113 intron CanA1 + chr3R 31042180 intron CanA1 + chr3R 31042248 intron CanA1 + chr3R_5_31040001 chr3R_31040001 RAL-832 1760 chr3R 31069632 31069677 chr3R 31069738 31069792 17 107 3.0 0.5 1.8 6.1 160 chr3R 31069632 intron Sox100B + chr3R 31069712 intron Sox100B + chr3R 31069792 intron Sox100B + chr3R_17_31065001 chr3R_31065001 RAL-832 1761 chr3R 31087125 31087128 chr3R 31087623 31087636 5 513 1.0 4.5 2.8 1.3 511 chr3R 31087125 intergenic not near genes chr3R 31087380 intergenic not near genes chr3R 31087636 intergenic not near genes chr3R_5_31085001 chr3R_31085001 RAL-832 1762 chr3R 31412688 31412723 chr3R 31412801 31412836 5 109 2.0 1.5 1.8 1.8 148 chr3R 31412688 intron Gprk2 + chr3R 31412762 intron Gprk2 + chr3R 31412836 intron Gprk2 + chr3R_5_31410001 chr3R_31410001 RAL-832 1763 chr3R 31426869 31426906 chr3R 31426981 31427007 10 107 2.5 7.0 4.8 1.7 138 chr3R 31426869 intron Gprk2 + chr3R 31426938 intron Gprk2 + chr3R 31427007 intron Gprk2 + chr3R_10_31425001 chr3R_31425001 RAL-832 1764 chr3R 31435349 31435388 chr3R 31435514 31435545 14 159 6.5 3.5 5.0 2.3 196 chr3R 31435349 intron Gprk2 + chr3R 31435447 intron Gprk2 + chr3R 31435545 intron Gprk2 + chr3R_14_31435001 chr3R_31435001 RAL-832 1765 chr3R 31486139 31486180 chr3R 31486233 31486248 8 93 1.0 1.5 1.2 3.6 109 chr3R 31486139 intergenic not near genes chr3R 31486194 intergenic not near genes chr3R 31486248 intergenic not near genes chr3R_8_31485001 chr3R_31485001 RAL-832 1766 chr3R 31610004 31610148 chr3R 31610095 31610239 15 98 4.5 17.0 10.8 1.3 235 chr3R 31610004 intron CycG - chr3R 31610122 intron CycG - chr3R 31610239 intron CycG - chr3R_15_31610001 chr3R_31610001 RAL-832 1767 chr3R 31691522 31691561 chr3R 31696301 31696327 Doc 10 4778 1.0 2.5 1.8 3.6 4805 chr3R 31691522 intergenic not near genes chr3R 31693924 intergenic not near genes chr3R 31696327 intergenic not near genes chr3R_10_31690001 chr3R_31690001 RAL-832 1768 chr3R 31911684 31911711 chr3R 31911765 31911801 5 84 1.5 4.5 3.0 1.2 117 chr3R 31911684 intron heph - chr3R 31911742 intron heph - chr3R 31911801 intron heph - chr3R_5_31910001 chr3R_31910001 RAL-832 1769 chr3R 31931181 31931198 chr3R 31931278 31931298 4 101 3.5 1.5 2.5 1.1 117 chr3R 31931181 intron heph - chr3R 31931240 intron heph - chr3R 31931298 intron heph - chr3R_4_31930001 chr3R_31930001 RAL-832 1770 chr3R 31931199 31931214 chr3R 31931277 31931300 7 92 3.0 1.5 2.2 2.2 101 chr3R 31931199 intron heph - chr3R 31931250 intron heph - chr3R 31931300 intron heph - chr3R_7_31930001 chr3R_31930001 RAL-832 1771 chr3R 31946000 31946050 chr3R 31946109 31946124 5 89 3.0 2.5 2.8 1.3 124 chr3R 31946000 intron heph - chr3R 31946062 intron heph - chr3R 31946124 intron heph - chr3R_5_31945001 chr3R_31945001 RAL-832 1772 chr3R 31975017 31975061 chr3R 31975128 31975172 9 110 1.5 4.0 2.8 2.4 155 chr3R 31975017 intron heph - chr3R 31975094 intron heph - chr3R 31975172 intron heph - chr3R_9_31975001 chr3R_31975001 RAL-832 1773 chr3R 31978539 31978585 chr3R 31978749 31978764 4 199 3.0 1.0 2.0 1.3 225 chr3R 31978539 intron,intron heph -,CG2003 + chr3R 31978652 intron,intron heph -,CG2003 + chr3R 31978764 intron,intron heph -,CG2003 + chr3R_4_31975001 chr3R_31975001 RAL-832 1774 chr3R 31997998 31998017 chr3R 32005461 32005491 blood 9 7480 3.5 3.5 3.5 2.0 7493 chr3R 31997998 intron heph - chr3R 32001744 intron heph - chr3R 32005491 intron heph - chr3R_9_32000001 chr3R_32000001 RAL-832 1775 chr4 319970 320017 chr4 328166 328213 Stalker2 12 8193 4.5 5.5 5.0 2.0 8243 chr4 319970 3` UTR CG32850 + chr4 324092 intron CG32850 + chr4 328213 3` UTR,3` UTR CG32850 +,PMCA - chr4_12_320001 chr4_320001 RAL-832 1776 chr4 959603 959616 chr4 959802 959815 4 198 8.0 3.5 5.8 0.6 212 chr4 959603 intergenic CR44030 +,CR45201 - chr4 959709 5` UTR CR44030 + chr4 959815 5` UTR CR44030 + chr4_4_955001 chr4_955001 RAL-832 1777 chr4 972478 972524 chr4 972580 972626 13 99 3.5 3.0 3.2 3.1 148 chr4 972478 intron fuss - chr4 972552 intron fuss - chr4 972626 intron fuss - chr4_13_970001 chr4_970001 RAL-832 1778 chrX 292425 292447 chrX 293064 293112 G3 10 649 2.5 24.5 13.5 0.7 687 chrX 292425 intron,intron CG3777 +,CG13375 - chrX 292768 intron,intron CG3777 +,CG13375 - chrX 293112 intron,intron CG3777 +,CG13375 - chrX_10_290001 chrX_290001 RAL-832 1779 chrX 318471 318500 chrX 323560 323581 flea 10 5095 4.5 3.5 4.0 2.0 5110 chrX 318471 intron,intron CG3777 +,CG32816 - chrX 321026 intron,intron CG3777 +,CG32816 - chrX 323581 intron,intron CG3777 +,CG32816 - chrX_10_320001 chrX_320001 RAL-832 1780 chrX 428427 428452 chrX 434603 434642 3S18 6 6194 4.0 5.0 4.5 1.1 6215 chrX 428427 intron CG32816 - chrX 431534 intron CG32816 - chrX 434642 intron CG32816 - chrX_6_430001 chrX_430001 RAL-832 1781 chrX 450349 450390 chrX 450447 450488 11 95 2.5 2.5 2.5 3.1 139 chrX 450349 intron CG32816 - chrX 450418 intron CG32816 - chrX 450488 intron CG32816 - chrX_11_450001 chrX_450001 RAL-832 1782 chrX 494609 494630 chrX 494701 494737 6 103 2.0 5.5 3.8 1.2 128 chrX 494609 intergenic CG17778 + chrX 494673 5` UTR CG17778 + chrX 494737 intron CG17778 + chrX_6_490001 chrX_490001 RAL-832 1783 chrX 547616 547661 chrX 547880 547925 9 263 3.5 3.0 3.2 2.1 309 chrX 547616 intron Appl + chrX 547770 intron Appl + chrX 547925 intron Appl + chrX_9_545001 chrX_545001 RAL-832 1784 chrX 667638 667670 chrX 667735 667774 11 103 3.5 2.0 2.8 2.9 136 chrX 667638 intergenic not near genes chrX 667706 intergenic not near genes chrX 667774 intergenic not near genes chrX_11_665001 chrX_665001 RAL-832 1785 chrX 812273 812299 chrX 817899 817948 297 6 5639 3.0 6.0 4.5 1.1 5675 chrX 812273 intron CG43867 - chrX 815110 intron CG43867 - chrX 817948 intron CG43867 - chrX_6_815001 chrX_815001 RAL-832 1786 chrX 827611 827633 chrX 835393 835445 roo 6 7798 3.0 3.5 3.2 1.4 7834 chrX 827611 intron CG43867 - chrX 831528 intron CG43867 - chrX 835445 intron CG43867 - chrX_6_830001 chrX_830001 RAL-832 1787 chrX 1357768 1357807 chrX 1367948 1367994 Doc 7 10177 1.0 2.0 1.5 2.8 10226 chrX 1357768 intergenic png - chrX 1362881 intergenic not near genes chrX 1367994 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-832 1788 chrX 1428584 1428621 chrX 1428690 1428714 5 99 3.5 1.5 2.5 1.4 130 chrX 1428584 intron futsch + chrX 1428649 intron futsch + chrX 1428714 intron futsch + chrX_5_1425001 chrX_1425001 RAL-832 1789 chrX 1518038 1518060 chrX 1523435 1523462 jockey 4 5398 2.5 1.5 2.0 1.3 5424 chrX 1518038 intergenic inc + chrX 1520750 intergenic not near genes chrX 1523462 intergenic not near genes chrX_4_1520001 chrX_1520001 RAL-832 1790 chrX 1930515 1930553 chrX 1938106 1938144 opus 7 7584 4.5 2.0 3.2 1.7 7629 chrX 1930515 3` UTR CG11596 + chrX 1934330 intergenic not near genes chrX 1938144 3` UTR CG3857 - chrX_7_1930001 chrX_1930001 RAL-832 1791 chrX 2291640 2291673 chrX 2291731 2291783 4 104 4.0 0.0 2.0 1.3 143 chrX 2291640 intron CG2865 - chrX 2291712 intron CG2865 - chrX 2291783 intron CG2865 - chrX_4_2290001 chrX_2290001 RAL-832 1792 chrX 2419686 2419729 chrX 2419794 2419802 9 99 1.0 2.0 1.5 3.6 116 chrX 2419686 intergenic not near genes chrX 2419744 intergenic not near genes chrX 2419802 intergenic not near genes chrX_9_2415001 chrX_2415001 RAL-832 1793 chrX 2544772 2544798 chrX 2544856 2544884 4 80 1.5 3.0 2.2 1.2 112 chrX 2544772 intron,3` UTR trol -,mir-4955 - chrX 2544828 intron,3` UTR trol -,mir-4955 - chrX 2544884 intron,3` UTR trol -,mir-4955 - chrX_4_2540001 chrX_2540001 RAL-832 1794 chrX 2578806 2578845 chrX 2578908 2578933 7 99 2.0 4.0 3.0 1.8 127 chrX 2578806 intergenic Pdfr +,Vha36-3 - chrX 2578870 intergenic Vha36-3 -,Pdfr + chrX 2578933 intergenic Vha36-3 -,Pdfr + chrX_7_2575001 chrX_2575001 RAL-832 1795 chrX 2844900 2844930 chrX 2852330 2852355 mdg1 8 7427 4.0 4.5 4.2 1.5 7455 chrX 2844900 intron kirre + chrX 2848628 intron kirre + chrX 2852355 intron kirre + chrX_8_2845001 chrX_2845001 RAL-832 1796 chrX 2877042 2877068 chrX 2877153 2877190 6 118 2.5 2.5 2.5 1.7 148 chrX 2877042 intron kirre + chrX 2877116 intron kirre + chrX 2877190 intron kirre + chrX_6_2875001 chrX_2875001 RAL-832 1797 chrX 3243628 3243656 chrX 3243733 3243766 10 105 5.5 2.5 4.0 2.0 138 chrX 3243628 intron dnc + chrX 3243697 intron dnc + chrX 3243766 intron dnc + chrX_10_3240001 chrX_3240001 RAL-832 1798 chrX 3306328 3306368 chrX 3306430 3306470 12 97 4.0 1.5 2.8 3.2 142 chrX 3306328 intron dnc + chrX 3306399 intron dnc + chrX 3306470 intron dnc + chrX_12_3305001 chrX_3305001 RAL-832 1799 chrX 3398137 3398154 chrX 3398236 3398251 8 99 3.5 6.5 5.0 1.3 114 chrX 3398137 intron,intron CR44999 +,CG12535 - chrX 3398194 intron,intron CR44999 +,CG12535 - chrX 3398251 intron,intron CR44999 +,CG12535 - chrX_8_3395001 chrX_3395001 RAL-832 1800 chrX 3408979 3409009 chrX 3409076 3409099 5 93 0.0 3.5 1.8 1.8 120 chrX 3408979 intron,intron CR44999 +,CG12535 - chrX 3409039 intron,intron CR44999 +,CG12535 - chrX 3409099 intron,intron CR44999 +,CG12535 - chrX_5_3405001 chrX_3405001 RAL-832 1801 chrX 3414328 3414365 chrX 3414465 3414512 4 144 2.5 2.5 2.5 1.1 184 chrX 3414328 intron,intron CR44999 +,CG12535 - chrX 3414420 intron,intron CR44999 +,CG12535 - chrX 3414512 intron,intron CR44999 +,CG12535 - chrX_4_3410001 chrX_3410001 RAL-832 1802 chrX 3493074 3493124 chrX 3502253 3502292 roo 5 9169 1.5 0.5 1.0 2.5 9218 chrX 3493074 intron,intron CR44999 +,Gas8 - chrX 3497683 intron,intron CR44999 +,Gas8 - chrX 3502292 intron,intron CR44999 +,Gas8 - chrX_5_3495001 chrX_3495001 RAL-832 1803 chrX 3513768 3513788 chrX 3513846 3513891 7 96 2.0 4.5 3.2 1.7 123 chrX 3513768 intron,intron CR44999 +,CG32791 - chrX 3513830 intron,intron CR44999 +,CG32791 - chrX 3513891 intron,intron CR44999 +,CG32791 - chrX_7_3510001 chrX_3510001 RAL-832 1804 chrX 3535392 3535433 chrX 3535500 3535544 9 97 1.5 2.5 2.0 3.0 152 chrX 3535392 intron CG32791 - chrX 3535468 intron CG32791 - chrX 3535544 intron CG32791 - chrX_9_3535001 chrX_3535001 RAL-832 1805 chrX 3597553 3597570 chrX 3619725 3619747 roo 5 22177 3.0 1.0 2.0 1.7 22194 chrX 3597553 intron AstA-R1 + chrX 3608650 intron AstA-R1 + chrX 3619747 intron AstA-R1 + chrX_5_3605001 chrX_3605001 RAL-832 1806 chrX 3630537 3630574 chrX 3630633 3630663 8 86 0.5 1.0 0.8 4.4 126 chrX 3630537 intron AstA-R1 + chrX 3630600 intron AstA-R1 + chrX 3630663 intron AstA-R1 + chrX_8_3630001 chrX_3630001 RAL-832 1807 chrX 3862800 3862846 chrX 3862904 3862950 8 101 4.0 3.0 3.5 1.8 150 chrX 3862800 intergenic yin - chrX 3862875 intergenic yin - chrX 3862950 intergenic yin - chrX_8_3860001 chrX_3860001 RAL-832 1808 chrX 3866120 3866127 chrX 3866186 3866225 5 80 5.5 0.0 2.8 1.3 105 chrX 3866120 intron yin - chrX 3866172 intron yin - chrX 3866225 intron yin - chrX_5_3865001 chrX_3865001 RAL-832 1809 chrX 3880469 3880489 chrX 3880560 3880569 5 96 4.5 2.5 3.5 1.1 100 chrX 3880469 intergenic VhaAC39-1 + chrX 3880519 intergenic VhaAC39-1 + chrX 3880569 intergenic VhaAC39-1 + chrX_5_3880001 chrX_3880001 RAL-832 1810 chrX 3881266 3881303 chrX 3881415 3881462 5 151 2.0 0.5 1.2 2.3 196 chrX 3881266 intron VhaAC39-1 + chrX 3881364 intron VhaAC39-1 + chrX 3881462 exon VhaAC39-1 + chrX_5_3880001 chrX_3880001 RAL-832 1811 chrX 3950787 3950830 chrX 3950887 3950929 6 96 3.0 3.5 3.2 1.4 142 chrX 3950787 intron Vap-33A + chrX 3950858 intron Vap-33A + chrX 3950929 intron Vap-33A + chrX_6_3950001 chrX_3950001 RAL-832 1812 chrX 3986859 3986894 chrX 3994502 3994531 412 6 7635 1.0 1.5 1.2 2.7 7672 chrX 3986859 intergenic not near genes chrX 3990695 intergenic not near genes chrX 3994531 intergenic not near genes chrX_6_3990001 chrX_3990001 RAL-832 1813 chrX 4101864 4101900 chrX 4101963 4101969 4 85 1.0 6.5 3.8 0.8 105 chrX 4101864 exon CG15375 + chrX 4101916 exon CG15375 + chrX 4101969 exon CG15375 + chrX_4_4100001 chrX_4100001 RAL-832 1814 chrX 4132654 4132687 chrX 4132833 4132872 6 185 3.0 3.0 3.0 1.5 218 chrX 4132654 3` UTR GlcAT-I + chrX 4132763 3` UTR GlcAT-I + chrX 4132872 intergenic Fas2 -,GlcAT-I + chrX_6_4130001 chrX_4130001 RAL-832 1815 chrX 4157877 4157922 chrX 4164950 4164985 297 5 7063 1.5 1.0 1.2 2.3 7108 chrX 4157877 intron Fas2 - chrX 4161431 intron Fas2 - chrX 4164985 intron Fas2 - chrX_5_4160001 chrX_4160001 RAL-832 1816 chrX 4203496 4203544 chrX 4203596 4203634 7 92 2.0 1.0 1.5 2.8 138 chrX 4203496 intron Fas2 - chrX 4203565 intron Fas2 - chrX 4203634 intron Fas2 - chrX_7_4200001 chrX_4200001 RAL-832 1817 chrX 4324376 4324414 chrX 4324468 4324508 5 93 1.5 0.5 1.0 2.5 132 chrX 4324376 intron norpA + chrX 4324442 intron norpA + chrX 4324508 intron norpA + chrX_5_4320001 chrX_4320001 RAL-832 1818 chrX 4361421 4361473 chrX 4361520 4361545 5 86 1.5 2.5 2.0 1.7 124 chrX 4361421 intron norpA + chrX 4361483 intron norpA + chrX 4361545 intron norpA + chrX_5_4360001 chrX_4360001 RAL-832 1819 chrX 4383125 4383134 chrX 4383229 4383237 4 103 2.5 3.0 2.8 1.1 112 chrX 4383125 intergenic not near genes chrX 4383181 intergenic not near genes chrX 4383237 intergenic not near genes chrX_4_4380001 chrX_4380001 RAL-832 1820 chrX 4525734 4525769 chrX 4525846 4525881 9 109 1.5 1.5 1.5 3.6 147 chrX 4525734 intron CR32773 - chrX 4525808 intron CR32773 - chrX 4525881 intron CR32773 - chrX_9_4525001 chrX_4525001 RAL-832 1821 chrX 4700379 4700426 chrX 4700740 4700774 jockey 4 359 2.0 2.5 2.2 1.2 395 chrX 4700379 3` UTR ctp + chrX 4700576 3` UTR ctp + chrX 4700774 3` UTR ctp + chrX_4_4700001 chrX_4700001 RAL-832 1822 chrX 4744141 4744162 chrX 4744259 4744270 5 116 1.5 0.0 0.8 2.8 129 chrX 4744141 intergenic not near genes chrX 4744206 intergenic not near genes chrX 4744270 intergenic not near genes chrX_5_4740001 chrX_4740001 RAL-832 1823 chrX 4763242 4763267 chrX 4763750 4763754 Stalker4 4 502 3.0 6.0 4.5 0.7 512 chrX 4763242 intergenic not near genes chrX 4763498 intergenic not near genes chrX 4763754 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-832 1824 chrX 4763269 4763283 chrX 4763742 4763771 Stalker4 4 491 2.0 5.0 3.5 0.9 502 chrX 4763269 intergenic not near genes chrX 4763520 intergenic not near genes chrX 4763771 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-832 1825 chrX 4792374 4792410 chrX 4792816 4792833 jockey 6 444 1.5 2.5 2.0 2.0 459 chrX 4792374 intergenic not near genes chrX 4792604 intergenic not near genes chrX 4792833 intergenic not near genes chrX_6_4790001 chrX_4790001 RAL-832 1826 chrX 4827656 4827676 chrX 4827732 4827753 5 89 3.0 3.5 3.2 1.2 97 chrX 4827656 intergenic not near genes chrX 4827704 intergenic not near genes chrX 4827753 intergenic not near genes chrX_5_4825001 chrX_4825001 RAL-832 1827 chrX 5134788 5134798 chrX 5134898 5134907 4 115 0.0 1.0 0.5 2.7 119 chrX 5134788 intron,intron CG15465 +,rg + chrX 5134848 intron,intron CG15465 +,rg + chrX 5134907 intron,intron CG15465 +,rg + chrX_4_5130001 chrX_5130001 RAL-832 1828 chrX 5134810 5134830 chrX 5134896 5134915 4 98 0.0 1.0 0.5 2.7 105 chrX 5134810 intron,intron CG15465 +,rg + chrX 5134862 intron,intron CG15465 +,rg + chrX 5134915 intron,intron CG15465 +,rg + chrX_4_5130001 chrX_5130001 RAL-832 1829 chrX 5345400 5345429 chrX 5345511 5345539 4 121 0.5 3.0 1.8 1.4 139 chrX 5345400 intron SK + chrX 5345470 intron SK + chrX 5345539 intron SK + chrX_4_5345001 chrX_5345001 RAL-832 1830 chrX 5376975 5376994 chrX 5377054 5377088 5 85 1.0 3.5 2.2 1.6 113 chrX 5376975 intron SK + chrX 5377032 intron SK + chrX 5377088 intron SK + chrX_5_5375001 chrX_5375001 RAL-832 1831 chrX 5473566 5473612 chrX 5473662 5473683 9 87 3.0 2.0 2.5 2.6 117 chrX 5473566 intron SPR + chrX 5473624 intron SPR + chrX 5473683 intron SPR + chrX_9_5470001 chrX_5470001 RAL-832 1832 chrX 5524822 5524842 chrX 5528705 5528725 412 7 3881 6.5 3.5 5.0 1.2 3903 chrX 5524822 intergenic snoRNA:Psi28S-3342 - chrX 5526774 intergenic not near genes chrX 5528725 intergenic Vsx2 - chrX_7_5525001 chrX_5525001 RAL-832 1833 chrX 5798873 5798883 chrX 5799039 5799051 5 169 0.0 3.0 1.5 2.0 178 chrX 5798873 intergenic not near genes chrX 5798962 intergenic not near genes chrX 5799051 intergenic not near genes chrX_5_5795001 chrX_5795001 RAL-832 1834 chrX 5848776 5848779 chrX 5848975 5849008 4 214 5.0 2.5 3.8 0.8 232 chrX 5848776 intergenic not near genes chrX 5848892 intergenic not near genes chrX 5849008 intergenic not near genes chrX_4_5845001 chrX_5845001 RAL-832 1835 chrX 5883828 5883840 chrX 5884069 5884096 pogo 4 254 1.0 3.5 2.2 1.2 268 chrX 5883828 intron CR45668 - chrX 5883962 intron CR45668 - chrX 5884096 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-832 1836 chrX 5884995 5885048 chrX 5885313 5885344 13 309 3.5 3.5 3.5 2.9 349 chrX 5884995 intron CR45668 - chrX 5885170 intron CR45668 - chrX 5885344 intron CR45668 - chrX_13_5885001 chrX_5885001 RAL-832 1837 chrX 6118677 6118732 chrX 6118779 6118834 8 95 2.0 2.0 2.0 2.7 157 chrX 6118677 intron Ca-alpha1T - chrX 6118756 intron Ca-alpha1T - chrX 6118834 intron Ca-alpha1T - chrX_8_6115001 chrX_6115001 RAL-832 1838 chrX 6171590 6171612 chrX 6179016 6179065 Quasimodo 9 7441 1.5 1.5 1.5 3.6 7475 chrX 6171590 intron Ca-alpha1T - chrX 6175328 intron Ca-alpha1T - chrX 6179065 intron Ca-alpha1T - chrX_9_6175001 chrX_6175001 RAL-832 1839 chrX 6306540 6306575 chrX 6306629 6306631 4 80 2.0 0.5 1.2 1.8 91 chrX 6306540 3` UTR CG3823 + chrX 6306586 3` UTR CG3823 + chrX 6306631 3` UTR CG3823 + chrX_4_6305001 chrX_6305001 RAL-832 1840 chrX 6312182 6312224 chrX 6312280 6312318 6 94 3.5 5.5 4.5 1.1 136 chrX 6312182 intron CG15894 + chrX 6312250 intron CG15894 + chrX 6312318 intron CG15894 + chrX_6_6310001 chrX_6310001 RAL-832 1841 chrX 6315147 6315190 chrX 6315297 6315340 9 148 3.5 4.0 3.8 1.9 193 chrX 6315147 intron CG15894 + chrX 6315244 intron CG15894 + chrX 6315340 intron CG15894 + chrX_9_6315001 chrX_6315001 RAL-832 1842 chrX 6388650 6388683 chrX 6388746 6388774 12 94 3.0 4.5 3.8 2.5 124 chrX 6388650 intergenic not near genes chrX 6388712 intergenic not near genes chrX 6388774 intergenic not near genes chrX_12_6385001 chrX_6385001 RAL-832 1843 chrX 6392884 6392903 chrX 6397628 6397668 Doc 4 4762 1.0 2.0 1.5 1.6 4784 chrX 6392884 intergenic not near genes chrX 6395276 intergenic not near genes chrX 6397668 intergenic not near genes chrX_4_6395001 chrX_6395001 RAL-832 1844 chrX 6415178 6415214 chrX 6415529 6415578 15 348 4.5 4.0 4.2 2.9 400 chrX 6415178 intergenic not near genes chrX 6415378 intergenic not near genes chrX 6415578 intergenic not near genes chrX_15_6415001 chrX_6415001 RAL-832 1845 chrX 6591836 6591873 chrX 6591941 6591973 5 103 1.0 0.5 0.8 2.8 137 chrX 6591836 intron Pat1 + chrX 6591904 intron Pat1 + chrX 6591973 intron Pat1 + chrX_5_6590001 chrX_6590001 RAL-832 1846 chrX 6865769 6865783 chrX 6865870 6865873 5 98 6.5 2.0 4.2 1.0 104 chrX 6865769 intron CG14434 - chrX 6865821 intron CG14434 - chrX 6865873 intron CG14434 - chrX_5_6865001 chrX_6865001 RAL-832 1847 chrX 6984607 6984650 chrX 6984704 6984747 10 95 7.0 1.5 4.2 1.9 140 chrX 6984607 intron ogre - chrX 6984677 intron ogre - chrX 6984747 intron ogre - chrX_10_6980001 chrX_6980001 RAL-832 1848 chrX 7023589 7023621 chrX 7030990 7031030 Tabor 6 7400 5.0 1.5 3.2 1.4 7441 chrX 7023589 intron CG12541 - chrX 7027310 intron CG12541 - chrX 7031030 intron CG12541 - chrX_6_7025001 chrX_7025001 RAL-832 1849 chrX 7298985 7299017 chrX 7299093 7299105 7 102 5.0 1.0 3.0 1.8 120 chrX 7298985 intron,intron CR44357 -,CG1677 - chrX 7299045 intron,intron CR44357 -,CG1677 - chrX 7299105 intron,intron CR44357 -,CG1677 - chrX_7_7295001 chrX_7295001 RAL-832 1850 chrX 7345189 7345214 chrX 7345295 7345326 6 102 2.0 4.5 3.2 1.4 137 chrX 7345189 intron,intron CR44357 -,CG1677 - chrX 7345258 intron,intron CR44357 -,CG1677 - chrX 7345326 intron,intron CR44357 -,CG1677 - chrX_6_7345001 chrX_7345001 RAL-832 1851 chrX 7845724 7845753 chrX 7847217 7847263 hopper2 6 1505 3.0 3.5 3.2 1.4 1539 chrX 7845724 intergenic not near genes chrX 7846494 intergenic not near genes chrX 7847263 intergenic not near genes chrX_6_7845001 chrX_7845001 RAL-832 1852 chrX 7881826 7881880 chrX 7881930 7881975 10 98 0.5 1.5 1.0 5.0 149 chrX 7881826 intergenic Ir7f -,Ir7e - chrX 7881900 intergenic Ir7f -,Ir7e - chrX 7881975 3` UTR Ir7f - chrX_10_7880001 chrX_7880001 RAL-832 1853 chrX 8031415 8031441 chrX 8035744 8035770 Juan 9 4328 4.0 4.0 4.0 1.8 4355 chrX 8031415 intergenic not near genes chrX 8033592 intergenic not near genes chrX 8035770 3` UTR CG2233 - chrX_9_8030001 chrX_8030001 RAL-832 1854 chrX 8092274 8092317 chrX 8092379 8092422 10 102 1.0 0.5 0.8 5.6 148 chrX 8092274 intron Ubc-E2H - chrX 8092348 intron Ubc-E2H - chrX 8092422 intron Ubc-E2H - chrX_10_8090001 chrX_8090001 RAL-832 1855 chrX 8506511 8506560 chrX 8506739 8506754 8 218 1.5 0.0 0.8 4.4 243 chrX 8506511 intron CG33181 + chrX 8506632 intron CG33181 + chrX 8506754 intron CG33181 + chrX_8_8505001 chrX_8505001 RAL-832 1856 chrX 8536756 8536776 chrX 8536837 8536872 4 89 2.5 2.0 2.2 1.2 116 chrX 8536756 intron Nrg + chrX 8536814 intron Nrg + chrX 8536872 intron Nrg + chrX_4_8535001 chrX_8535001 RAL-832 1857 chrX 8544127 8544153 chrX 8544226 8544252 6 95 5.5 1.5 3.5 1.3 125 chrX 8544127 intron Nrg + chrX 8544190 intron Nrg + chrX 8544252 intron Nrg + chrX_6_8540001 chrX_8540001 RAL-832 1858 chrX 8658685 8658709 chrX 8658795 8658808 7 107 4.0 0.0 2.0 2.3 123 chrX 8658685 intergenic not near genes chrX 8658746 intergenic not near genes chrX 8658808 intergenic not near genes chrX_7_8655001 chrX_8655001 RAL-832 1859 chrX 8885656 8885696 chrX 8885766 8885796 8 111 3.0 1.5 2.2 2.5 140 chrX 8885656 intron Moe - chrX 8885726 intron Moe - chrX 8885796 intron Moe - chrX_8_8885001 chrX_8885001 RAL-832 1860 chrX 8888629 8888674 chrX 8888721 8888764 10 93 3.5 0.5 2.0 3.3 135 chrX 8888629 intron Moe - chrX 8888696 intron Moe - chrX 8888764 intron Moe - chrX_10_8885001 chrX_8885001 RAL-832 1861 chrX 8894987 8894995 chrX 8895093 8895101 4 106 3.0 1.5 2.2 1.2 114 chrX 8894987 intron Moe - chrX 8895044 intron Moe - chrX 8895101 intron Moe - chrX_4_8895001 chrX_8895001 RAL-832 1862 chrX 8922331 8922352 chrX 8922761 8922761 jockey 4 424 3.5 3.0 3.2 1.0 430 chrX 8922331 intron rdgA + chrX 8922546 intron rdgA + chrX 8922761 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-832 1863 chrX 8927579 8927608 chrX 8929852 8929893 NOF 7 2283 5.5 2.0 3.8 1.5 2314 chrX 8927579 intron rdgA + chrX 8928736 intron rdgA + chrX 8929893 intron rdgA + chrX_7_8925001 chrX_8925001 RAL-832 1864 chrX 8948753 8948760 chrX 8956272 8956289 roo 5 7522 7.5 3.5 5.5 0.8 7536 chrX 8948753 intron rdgA + chrX 8952521 intron rdgA + chrX 8956289 intron rdgA + chrX_5_8950001 chrX_8950001 RAL-832 1865 chrX 8948761 8948787 chrX 8956266 8956312 roo 5 7524 3.5 3.5 3.5 1.1 7551 chrX 8948761 intron rdgA + chrX 8952536 intron rdgA + chrX 8956312 intron rdgA + chrX_5_8950001 chrX_8950001 RAL-832 1866 chrX 9062728 9062753 chrX 9062822 9062851 4 93 2.5 1.5 2.0 1.3 123 chrX 9062728 intron CG15365 - chrX 9062790 intron CG15365 - chrX 9062851 intron CG15365 - chrX_4_9060001 chrX_9060001 RAL-832 1867 chrX 9188005 9188029 chrX 9188092 9188126 4 94 2.0 4.0 3.0 1.0 121 chrX 9188005 3` UTR mei-P26 + chrX 9188066 3` UTR mei-P26 + chrX 9188126 3` UTR mei-P26 + chrX_4_9185001 chrX_9185001 RAL-832 1868 chrX 9507312 9507334 chrX 9507421 9507443 5 108 2.5 2.5 2.5 1.4 131 chrX 9507312 intron CG32700 - chrX 9507378 intron CG32700 - chrX 9507443 intron CG32700 - chrX_5_9505001 chrX_9505001 RAL-832 1869 chrX 9508127 9508155 chrX 9509658 9509693 jockey 5 1535 7.5 2.0 4.8 0.9 1566 chrX 9508127 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509693 intron CG32700 - chrX_5_9505001 chrX_9505001 RAL-832 1870 chrX 10138211 10138238 chrX 10145723 10145762 412 7 7520 4.5 4.0 4.2 1.3 7551 chrX 10138211 intron,intron RhoU +,CR44894 - chrX 10141986 intron,intron RhoU +,CR44894 - chrX 10145762 intron,intron RhoU +,CR44894 - chrX_7_10140001 chrX_10140001 RAL-832 1871 chrX 10267306 10267333 chrX 10276456 10276493 roo 12 9164 1.5 5.0 3.2 2.9 9187 chrX 10267306 3` UTR alpha-Man-I - chrX 10271900 intron alpha-Man-I - chrX 10276493 3` UTR alpha-Man-I - chrX_12_10270001 chrX_10270001 RAL-832 1872 chrX 10306036 10306063 chrX 10306146 10306150 6 104 7.5 0.0 3.8 1.2 114 chrX 10306036 intron alpha-Man-I - chrX 10306093 intron alpha-Man-I - chrX 10306150 intron alpha-Man-I - chrX_6_10305001 chrX_10305001 RAL-832 1873 chrX 10348779 10348830 chrX 10356364 10356367 springer 10 7569 4.0 2.0 3.0 2.5 7588 chrX 10348779 intergenic snoRNA:U3:9B + chrX 10352573 intergenic not near genes chrX 10356367 intergenic l(1)G0289 - chrX_10_10350001 chrX_10350001 RAL-832 1874 chrX 10367192 10367206 chrX 10367301 10367325 4 115 0.5 2.5 1.5 1.6 133 chrX 10367192 exon CG32679 - chrX 10367258 intron CG32679 - chrX 10367325 intron CG32679 - chrX_4_10365001 chrX_10365001 RAL-832 1875 chrX 10431326 10431358 chrX 10431416 10431458 9 95 1.5 2.5 2.0 3.0 132 chrX 10431326 intron CG32683 - chrX 10431392 intron CG32683 - chrX 10431458 intron CG32683 - chrX_9_10430001 chrX_10430001 RAL-832 1876 chrX 10550321 10550339 chrX 10550419 10550437 4 98 5.0 2.0 3.5 0.9 116 chrX 10550321 intron spri - chrX 10550379 intron spri - chrX 10550437 intron spri - chrX_4_10550001 chrX_10550001 RAL-832 1877 chrX 10550344 10550359 chrX 10550412 10550457 4 89 3.0 1.5 2.2 1.2 113 chrX 10550344 intron spri - chrX 10550400 intron spri - chrX 10550457 intron spri - chrX_4_10550001 chrX_10550001 RAL-832 1878 chrX 10686043 10686081 chrX 10691186 10691227 roo 10 5149 5.5 0.5 3.0 2.5 5184 chrX 10686043 intron X11Lbeta + chrX 10688635 intron X11Lbeta + chrX 10691227 intron X11Lbeta + chrX_10_10685001 chrX_10685001 RAL-832 1879 chrX 10803030 10803049 chrX 10803120 10803152 4 92 3.5 5.5 4.5 0.7 122 chrX 10803030 intron Imp - chrX 10803091 intron Imp - chrX 10803152 intron Imp - chrX_4_10800001 chrX_10800001 RAL-832 1880 chrX 10864135 10864147 chrX 10864251 10864275 5 126 3.5 4.5 4.0 1.0 140 chrX 10864135 3` UTR CG2186 + chrX 10864205 3` UTR CG2186 + chrX 10864275 3` UTR CG2186 + chrX_5_10860001 chrX_10860001 RAL-832 1881 chrX 11062430 11062477 chrX 11062543 11062582 9 111 1.0 2.0 1.5 3.6 152 chrX 11062430 exon CG1537 - chrX 11062506 intron CG1537 - chrX 11062582 intron CG1537 - chrX_9_11060001 chrX_11060001 RAL-832 1882 chrX 11069141 11069192 chrX 11069304 11069337 5 155 1.5 2.5 2.0 1.7 196 chrX 11069141 intergenic not near genes chrX 11069239 intergenic not near genes chrX 11069337 intergenic not near genes chrX_5_11065001 chrX_11065001 RAL-832 1883 chrX 11095988 11096014 chrX 11103099 11103136 HMS-Beagle 5 7110 7.5 4.5 6.0 0.7 7148 chrX 11095988 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103136 intron CG42249 + chrX_5_11095001 chrX_11095001 RAL-832 1884 chrX 11109417 11109417 chrX 12946233 12946235 8 1836817 17.0 14.0 15.5 0.5 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_8_12025001 chrX_12025001 RAL-832 1885 chrX 11166746 11166790 chrX 11166835 11166880 10 91 1.0 5.5 3.2 2.4 134 chrX 11166746 intergenic not near genes chrX 11166813 intergenic not near genes chrX 11166880 intergenic not near genes chrX_10_11165001 chrX_11165001 RAL-832 1886 chrX 11633396 11633437 chrX 11640470 11640511 297 10 7074 2.0 3.5 2.8 2.6 7115 chrX 11633396 intron Ptp10D + chrX 11636954 intron Ptp10D + chrX 11640511 intron Ptp10D + chrX_10_11635001 chrX_11635001 RAL-832 1887 chrX 11799021 11799037 chrX 11799116 11799143 4 97 2.0 4.5 3.2 1.0 122 chrX 11799021 intron CkIIbeta + chrX 11799082 intron CkIIbeta + chrX 11799143 intron CkIIbeta + chrX_4_11795001 chrX_11795001 RAL-832 1888 chrX 11915625 11915672 chrX 11915938 11915971 6 307 0.5 3.5 2.0 2.0 346 chrX 11915625 intron pot - chrX 11915798 intron pot - chrX 11915971 intron pot - chrX_6_11915001 chrX_11915001 RAL-832 1889 chrX 11922352 11922378 chrX 11922496 11922531 7 150 5.5 3.5 4.5 1.3 179 chrX 11922352 exon Sclp - chrX 11922442 intron Sclp - chrX 11922531 intron Sclp - chrX_7_11920001 chrX_11920001 RAL-832 1890 chrX 12205901 12205922 chrX 12205988 12206017 4 91 0.5 1.5 1.0 2.0 116 chrX 12205901 intron Ten-a + chrX 12205959 intron Ten-a + chrX 12206017 intron Ten-a + chrX_4_12205001 chrX_12205001 RAL-832 1891 chrX 12350791 12350794 chrX 12350867 12350876 4 78 2.5 0.5 1.5 1.6 85 chrX 12350791 intergenic not near genes chrX 12350834 intergenic not near genes chrX 12350876 intergenic not near genes chrX_4_12350001 chrX_12350001 RAL-832 1892 chrX 12381843 12381902 chrX 12385776 12385790 flea 11 3920 0.0 2.5 1.2 5.0 3947 chrX 12381843 intergenic not near genes chrX 12383816 intergenic not near genes chrX 12385790 intergenic not near genes chrX_11_12380001 chrX_12380001 RAL-832 1893 chrX 12480296 12480308 chrX 12480379 12480386 5 78 0.5 1.0 0.8 2.8 90 chrX 12480296 intergenic not near genes chrX 12480341 intergenic not near genes chrX 12480386 intergenic not near genes chrX_5_12480001 chrX_12480001 RAL-832 1894 chrX 12528853 12528879 chrX 12528949 12528955 7 92 3.5 2.0 2.8 1.8 102 chrX 12528853 intron CG43921 - chrX 12528904 intron CG43921 - chrX 12528955 intron CG43921 - chrX_7_12525001 chrX_12525001 RAL-832 1895 chrX 12537283 12537566 chrX 12537385 12537649 6 94 0.0 0.0 0.0 6.0 366 chrX 12537283 intron CG43921 - chrX 12537466 intron CG43921 - chrX 12537649 intron CG43921 - chrX_6_12535001 chrX_12535001 RAL-832 1896 chrX 12539422 12539469 chrX 12539527 12539543 13 100 3.5 1.5 2.5 3.7 121 chrX 12539422 intron CG43921 - chrX 12539482 intron CG43921 - chrX 12539543 intron CG43921 - chrX_13_12535001 chrX_12535001 RAL-832 1897 chrX 9845361 9845361 chrX 12546496 12546496 gypsy5 6 2701135 5.0 17.0 11.0 0.5 2701135 chrX 9845361 intron CG32698 + chrX 11195928 intergenic not near genes chrX 12546496 intron CG43921 - chrX_6_11195001 chrX_11195001 RAL-832 1898 chrX 12764381 12764396 chrX 12764530 12764545 5 149 3.5 4.0 3.8 1.0 164 chrX 12764381 intergenic not near genes chrX 12764463 intergenic not near genes chrX 12764545 intergenic not near genes chrX_5_12760001 chrX_12760001 RAL-832 1899 chrX 12785410 12785463 chrX 12785501 12785513 13 87 3.0 3.5 3.2 3.1 103 chrX 12785410 intergenic Pde9 -,CG32647 - chrX 12785462 intergenic Pde9 - chrX 12785513 intergenic Pde9 - chrX_13_12785001 chrX_12785001 RAL-832 1900 chrX 12823178 12823225 chrX 12823275 12823286 6 86 2.0 1.0 1.5 2.4 108 chrX 12823178 intron Pde9 - chrX 12823232 intron Pde9 - chrX 12823286 intron Pde9 - chrX_6_12820001 chrX_12820001 RAL-832 1901 chrX 12912611 12912648 chrX 12912728 12912765 9 116 1.5 2.5 2.0 3.0 154 chrX 12912611 5` UTR CR45625 + chrX 12912688 5` UTR CR45625 + chrX 12912765 5` UTR CR45625 + chrX_9_12910001 chrX_12910001 RAL-832 1902 chrX 12930578 12930607 chrX 12937714 12937728 HMS-Beagle 7 7132 3.0 5.0 4.0 1.4 7150 chrX 12930578 intron fne + chrX 12934153 intron fne + chrX 12937728 intron fne + chrX_7_12930001 chrX_12930001 RAL-832 1903 chrX 13172361 13172379 chrX 13172437 13172464 4 84 1.0 4.5 2.8 1.1 103 chrX 13172361 exon CG34411 - chrX 13172412 intron CG34411 - chrX 13172464 intron CG34411 - chrX_4_13170001 chrX_13170001 RAL-832 1904 chrX 13401469 13401521 chrX 13401841 13401893 jockey 9 371 1.0 3.0 2.0 3.0 424 chrX 13401469 intergenic CG1673 +,CG12725 - chrX 13401681 intergenic CG12725 -,CG1673 + chrX 13401893 3` UTR CG12725 - chrX_9_13400001 chrX_13400001 RAL-832 1905 chrX 13429478 13429493 chrX 13430612 13430615 jockey 5 1150 0.0 3.0 1.5 2.0 1137 chrX 13429478 intergenic not near genes chrX 13430046 intergenic not near genes chrX 13430615 intergenic not near genes chrX_5_13430001 chrX_13430001 RAL-832 1906 chrX 13442121 13442167 chrX 13442232 13442272 9 106 0.5 2.5 1.5 3.6 151 chrX 13442121 intergenic not near genes chrX 13442196 intergenic not near genes chrX 13442272 intergenic not near genes chrX_9_13440001 chrX_13440001 RAL-832 1907 chrX 13443414 13443419 chrX 13443501 13443516 4 90 0.5 4.5 2.5 1.1 102 chrX 13443414 intergenic not near genes chrX 13443465 intergenic not near genes chrX 13443516 intergenic not near genes chrX_4_13440001 chrX_13440001 RAL-832 1908 chrX 13463634 13463677 chrX 13469230 13469249 mdg3 12 5588 3.5 5.5 4.5 2.2 5615 chrX 13463634 intron Neto + chrX 13466442 intron Neto + chrX 13469249 intron Neto + chrX_12_13465001 chrX_13465001 RAL-832 1909 chrX 13894406 13894423 chrX 13894482 13894519 5 86 2.0 1.0 1.5 2.0 113 chrX 13894406 intron mamo - chrX 13894462 intron mamo - chrX 13894519 intron mamo - chrX_5_13890001 chrX_13890001 RAL-832 1910 chrX 13934292 13934317 chrX 13934379 13934420 7 95 2.5 5.5 4.0 1.4 128 chrX 13934292 intron mamo - chrX 13934356 intron mamo - chrX 13934420 intron mamo - chrX_7_13930001 chrX_13930001 RAL-832 1911 chrX 13937994 13938008 chrX 13941270 13941299 I-element 5 3287 1.0 1.0 1.0 2.5 3305 chrX 13937994 intron mamo - chrX 13939646 intron mamo - chrX 13941299 intron mamo - chrX_5_13935001 chrX_13935001 RAL-832 1912 chrX 13943277 13943301 chrX 13943381 13943392 6 100 0.0 2.5 1.2 2.7 115 chrX 13943277 intron mamo - chrX 13943334 intron mamo - chrX 13943392 intron mamo - chrX_6_13940001 chrX_13940001 RAL-832 1913 chrX 13057298 13057304 chrX 13966949 13966949 5 909648 18.0 8.5 13.2 0.4 909651 chrX 13057298 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_5_13510001 chrX_13510001 RAL-832 1914 chrX 14157576 14157615 chrX 14163253 14163274 297 7 5671 8.0 5.0 6.5 0.9 5698 chrX 14157576 intergenic not near genes chrX 14160425 intergenic not near genes chrX 14163274 intergenic not near genes chrX_7_14160001 chrX_14160001 RAL-832 1915 chrX 14167398 14167433 chrX 14167502 14167548 12 111 3.0 4.5 3.8 2.5 150 chrX 14167398 intergenic not near genes chrX 14167473 intergenic not near genes chrX 14167548 intergenic not near genes chrX_12_14165001 chrX_14165001 RAL-832 1916 chrX 14381409 14381412 chrX 14381568 14381586 4 169 1.5 1.0 1.2 1.8 177 chrX 14381409 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381498 intron dpr8 + chrX 14381586 intron dpr8 + chrX_4_14380001 chrX_14380001 RAL-832 1917 chrX 14396832 14396870 chrX 14396933 14396965 4 92 1.5 2.0 1.8 1.4 133 chrX 14396832 intron dpr8 + chrX 14396898 intron dpr8 + chrX 14396965 intron dpr8 + chrX_4_14395001 chrX_14395001 RAL-832 1918 chrX 14416293 14416333 chrX 14421080 14421119 F-element 9 4787 2.5 3.5 3.0 2.2 4826 chrX 14416293 intron dpr8 + chrX 14418706 intron dpr8 + chrX 14421119 intron dpr8 + chrX_9_14415001 chrX_14415001 RAL-832 1919 chrX 14570067 14570108 chrX 14570169 14570210 5 98 2.5 0.5 1.5 2.0 143 chrX 14570067 intergenic not near genes chrX 14570138 intergenic not near genes chrX 14570210 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-832 1920 chrX 14572872 14572905 chrX 14572980 14572986 5 93 3.5 1.5 2.5 1.4 114 chrX 14572872 intergenic not near genes chrX 14572929 intergenic not near genes chrX 14572986 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-832 1921 chrX 14589685 14589706 chrX 14589920 14589940 pogo 4 244 2.0 0.0 1.0 2.0 255 chrX 14589685 intron CG9413 - chrX 14589812 intron CG9413 - chrX 14589940 intron CG9413 - chrX_4_14585001 chrX_14585001 RAL-832 1922 chrX 14593790 14593821 chrX 14593887 14593923 7 97 0.5 3.0 1.8 2.5 133 chrX 14593790 intron CG9413 - chrX 14593856 intron CG9413 - chrX 14593923 intron CG9413 - chrX_7_14590001 chrX_14590001 RAL-832 1923 chrX 14752833 14752855 chrX 14752926 14752959 6 99 2.5 3.0 2.8 1.6 126 chrX 14752833 intergenic not near genes chrX 14752896 intergenic not near genes chrX 14752959 intergenic not near genes chrX_6_14750001 chrX_14750001 RAL-832 1924 chrX 14778027 14778041 chrX 14782824 14782858 Doc 6 4812 5.5 3.0 4.2 1.2 4831 chrX 14778027 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782858 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-832 1925 chrX 14806746 14806779 chrX 14806854 14806886 7 105 0.5 0.5 0.5 4.7 140 chrX 14806746 intron rut - chrX 14806816 intron rut - chrX 14806886 intron rut - chrX_7_14805001 chrX_14805001 RAL-832 1926 chrX 14888937 14888975 chrX 14889043 14889081 5 102 1.0 4.5 2.8 1.3 144 chrX 14888937 intron,intron Flo2 +,CG9514 - chrX 14889009 intron,intron Flo2 +,CG9514 - chrX 14889081 intron,intron Flo2 +,CG9514 - chrX_5_14885001 chrX_14885001 RAL-832 1927 chrX 14936854 14936893 chrX 14946131 14946160 roo 5 9273 2.5 2.5 2.5 1.4 9306 chrX 14936854 intron pdgy - chrX 14941507 intron pdgy - chrX 14946160 intron pdgy - chrX_5_14940001 chrX_14940001 RAL-832 1928 chrX 14968053 14968098 chrX 14968152 14968197 9 97 1.5 1.0 1.2 4.1 144 chrX 14968053 intron eag + chrX 14968125 intron eag + chrX 14968197 intron eag + chrX_9_14965001 chrX_14965001 RAL-832 1929 chrX 3723571 3723593 chrX 15019095 15019097 4 11295510 11.0 18.5 14.8 0.3 11295526 chrX 3723571 intron tlk + chrX 9371334 exon mgl - chrX 15019097 intron hiw - chrX_4_9370001 chrX_9370001 RAL-832 1930 chrX 15127202 15127234 chrX 15127383 15127402 8 178 10.5 1.0 5.8 1.2 200 chrX 15127202 intron drd + chrX 15127302 intron drd + chrX 15127402 intron drd + chrX_8_15125001 chrX_15125001 RAL-832 1931 chrX 15200621 15200637 chrX 15200717 15200718 5 88 1.0 3.0 2.0 1.7 97 chrX 15200621 intergenic not near genes chrX 15200670 intergenic not near genes chrX 15200718 intergenic not near genes chrX_5_15200001 chrX_15200001 RAL-832 1932 chrX 15234348 15234363 chrX 15234451 15234466 5 101 7.0 4.5 5.8 0.7 118 chrX 15234348 intergenic not near genes chrX 15234407 intergenic not near genes chrX 15234466 intergenic not near genes chrX_5_15230001 chrX_15230001 RAL-832 1933 chrX 15234366 15234392 chrX 15234450 15234484 7 92 4.5 4.5 4.5 1.3 118 chrX 15234366 intergenic not near genes chrX 15234425 intergenic not near genes chrX 15234484 intergenic not near genes chrX_7_15230001 chrX_15230001 RAL-832 1934 chrX 15248258 15248296 chrX 15248354 15248372 12 93 3.0 5.0 4.0 2.4 114 chrX 15248258 intergenic not near genes chrX 15248315 intergenic not near genes chrX 15248372 intergenic not near genes chrX_12_15245001 chrX_15245001 RAL-832 1935 chrX 15369846 15369860 chrX 15369913 15369956 8 90 1.0 2.5 1.8 2.9 110 chrX 15369846 intron acj6 - chrX 15369901 intron acj6 - chrX 15369956 intron acj6 - chrX_8_15365001 chrX_15365001 RAL-832 1936 chrX 15413037 15413083 chrX 15417358 15417388 Juan 6 4306 2.0 2.5 2.2 1.9 4351 chrX 15413037 intron Cngl - chrX 15415212 intron Cngl - chrX 15417388 intron Cngl - chrX_6_15415001 chrX_15415001 RAL-832 1937 chrX 15591186 15591200 chrX 15591282 15591296 4 96 0.0 4.5 2.2 1.2 110 chrX 15591186 intron CG9220 - chrX 15591241 intron CG9220 - chrX 15591296 intron CG9220 - chrX_4_15590001 chrX_15590001 RAL-832 1938 chrX 15749653 15749685 chrX 15749776 15749808 8 123 0.5 3.5 2.0 2.7 155 chrX 15749653 intron CG8239 + chrX 15749730 intron CG8239 + chrX 15749808 intron CG8239 + chrX_8_15745001 chrX_15745001 RAL-832 1939 chrX 15864369 15864381 chrX 15866993 15867005 10 2624 19.0 11.0 15.0 0.6 2636 chrX 15864369 3` UTR Gbeta13F + chrX 15865687 3` UTR Gbeta13F + chrX 15867005 intergenic not near genes chrX_10_15865001 chrX_15865001 RAL-832 1940 chrX 15869793 15869830 chrX 15869974 15869986 10 172 2.5 2.0 2.2 3.1 193 chrX 15869793 intergenic Gapdh2 +,CG16952 + chrX 15869890 intergenic Gapdh2 +,CG16952 + chrX 15869986 intergenic CG16952 +,Gapdh2 + chrX_10_15865001 chrX_15865001 RAL-832 1941 chrX 15898436 15898450 chrX 15898602 15898605 6 164 2.5 3.5 3.0 1.5 169 chrX 15898436 intron shi + chrX 15898520 intron shi + chrX 15898605 intron shi + chrX_6_15895001 chrX_15895001 RAL-832 1942 chrX 15939249 15939304 chrX 15939354 15939409 11 98 3.0 1.0 2.0 3.7 160 chrX 15939249 intron Stim - chrX 15939329 intron Stim - chrX 15939409 intron Stim - chrX_11_15935001 chrX_15935001 RAL-832 1943 chrX 16222757 16222809 chrX 16231127 16231179 roo 20 8364 3.0 5.0 4.0 4.0 8422 chrX 16222757 intergenic not near genes chrX 16226968 intergenic not near genes chrX 16231179 intergenic not near genes chrX_20_16225001 chrX_16225001 RAL-832 1944 chrX 16295510 16295531 chrX 16295614 16295635 4 104 3.5 0.0 1.8 1.4 125 chrX 16295510 intron CG9911 - chrX 16295572 intron CG9911 - chrX 16295635 intron CG9911 - chrX_4_16295001 chrX_16295001 RAL-832 1945 chrX 16340661 16340695 chrX 16349823 16349872 roo 11 9175 5.0 4.0 4.5 2.0 9211 chrX 16340661 intergenic Dsp1 + chrX 16345266 intergenic not near genes chrX 16349872 intergenic sl + chrX_11_16345001 chrX_16345001 RAL-832 1946 chrX 16404344 16404380 chrX 16404450 16404496 5 114 5.5 3.5 4.5 0.9 152 chrX 16404344 intron CG9981 - chrX 16404420 intron CG9981 - chrX 16404496 5` UTR CG9981 - chrX_5_16400001 chrX_16400001 RAL-832 1947 chrX 16492627 16492677 chrX 16498224 16498258 mdg3 13 5593 3.5 2.0 2.8 3.4 5631 chrX 16492627 intron para - chrX 16495442 intron para - chrX 16498258 intron para - chrX_13_16495001 chrX_16495001 RAL-832 1948 chrX 16690117 16690135 chrX 16690222 16690240 5 103 1.0 0.0 0.5 3.3 123 chrX 16690117 intron Sep4 - chrX 16690178 intron Sep4 - chrX 16690240 intron Sep4 - chrX_5_16690001 chrX_16690001 RAL-832 1949 chrX 1053117 1053123 chrX 16983076 16983076 7 15929954 3.0 12.0 7.5 0.8 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_7_9015001 chrX_9015001 RAL-832 1950 chrX 16983076 16983077 chrX 19404963 19404963 8 2421886 13.0 3.5 8.2 0.9 2421887 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404963 intron kek5 + chrX_8_18190001 chrX_18190001 RAL-832 1951 chrX 17057914 17057965 chrX 17058175 17058226 pogo 4 261 3.5 3.5 3.5 0.9 312 chrX 17057914 intron CG45002 - chrX 17058070 intron CG45002 - chrX 17058226 intron CG45002 - chrX_4_17055001 chrX_17055001 RAL-832 1952 chrX 17061551 17061602 chrX 17061694 17061745 9 138 3.5 1.5 2.5 2.6 194 chrX 17061551 intron CG45002 - chrX 17061648 intron CG45002 - chrX 17061745 intron CG45002 - chrX_9_17060001 chrX_17060001 RAL-832 1953 chrX 17195187 17195232 chrX 17200292 17200338 flea 10 5103 4.0 3.5 3.8 2.1 5151 chrX 17195187 3` UTR baz + chrX 17197762 3` UTR baz + chrX 17200338 3` UTR baz + chrX_10_17195001 chrX_17195001 RAL-832 1954 chrX 17205837 17205841 chrX 17205947 17205951 4 109 7.0 7.0 7.0 0.5 114 chrX 17205837 intergenic not near genes chrX 17205894 intergenic not near genes chrX 17205951 intergenic CG32564 + chrX_4_17205001 chrX_17205001 RAL-832 1955 chrX 17316358 17316385 chrX 17316462 17316474 7 101 3.0 0.0 1.5 2.8 116 chrX 17316358 intron B-H2 + chrX 17316416 intron B-H2 + chrX 17316474 intron B-H2 + chrX_7_17315001 chrX_17315001 RAL-832 1956 chrX 17427058 17427077 chrX 17427135 17427162 5 95 1.5 1.5 1.5 2.0 104 chrX 17427058 intron,intron CG12994 -,CG5613 + chrX 17427110 intron,intron CG12994 -,CG5613 + chrX 17427162 intron,intron CG12994 -,CG5613 + chrX_5_17425001 chrX_17425001 RAL-832 1957 chrX 17435735 17435778 chrX 17435831 17435845 9 88 1.0 2.0 1.5 3.6 110 chrX 17435735 intron CG12994 - chrX 17435790 intron CG12994 - chrX 17435845 intron CG12994 - chrX_9_17435001 chrX_17435001 RAL-832 1958 chrX 17536827 17536876 chrX 17536931 17536969 11 95 2.0 3.5 2.8 2.9 142 chrX 17536827 intron CG43658 - chrX 17536898 intron CG43658 - chrX 17536969 intron CG43658 - chrX_11_17535001 chrX_17535001 RAL-832 1959 chrX 17544993 17545032 chrX 17545095 17545134 5 102 3.0 3.0 3.0 1.2 141 chrX 17544993 intron CG43658 - chrX 17545064 intron CG43658 - chrX 17545134 intron CG43658 - chrX_5_17545001 chrX_17545001 RAL-832 1960 chrX 17766355 17766375 chrX 17766456 17766481 5 102 0.5 2.0 1.2 2.3 126 chrX 17766355 intergenic not near genes chrX 17766418 intergenic not near genes chrX 17766481 intergenic not near genes chrX_5_17765001 chrX_17765001 RAL-832 1961 chrX 17972760 17972775 chrX 17972873 17972888 4 108 3.0 0.0 1.5 1.6 128 chrX 17972760 intron Sh - chrX 17972824 intron Sh - chrX 17972888 intron Sh - chrX_4_17970001 chrX_17970001 RAL-832 1962 chrX 18020803 18020812 chrX 18020910 18020919 5 107 7.0 6.5 6.8 0.6 116 chrX 18020803 intron Sh - chrX 18020861 intron Sh - chrX 18020919 intron Sh - chrX_5_18020001 chrX_18020001 RAL-832 1963 chrX 18020815 18020835 chrX 18020906 18020942 9 101 3.5 6.5 5.0 1.5 127 chrX 18020815 intron Sh - chrX 18020878 intron Sh - chrX 18020942 intron Sh - chrX_9_18020001 chrX_18020001 RAL-832 1964 chrX 18130467 18130506 chrX 18130569 18130590 9 99 1.5 1.0 1.2 4.1 123 chrX 18130467 3` UTR ari-1 - chrX 18130528 3` UTR ari-1 - chrX 18130590 3` UTR ari-1 - chrX_9_18130001 chrX_18130001 RAL-832 1965 chrX 18194067 18194092 chrX 18194606 18194628 BS 11 545 4.0 3.0 3.5 2.4 561 chrX 18194067 intron Frq2 + chrX 18194348 intron Frq2 + chrX 18194628 intron Frq2 + chrX_11_18190001 chrX_18190001 RAL-832 1966 chrX 18320484 18320499 chrX 18320621 18320640 5 141 3.5 3.0 3.2 1.2 156 chrX 18320484 intron CG6023 - chrX 18320562 intron CG6023 - chrX 18320640 intron CG6023 - chrX_5_18320001 chrX_18320001 RAL-832 1967 chrX 18427375 18427408 chrX 18427794 18427811 7 425 2.0 3.0 2.5 2.0 436 chrX 18427375 intergenic CG42323 + chrX 18427593 intergenic not near genes chrX 18427811 intergenic not near genes chrX_7_18425001 chrX_18425001 RAL-832 1968 chrX 18429475 18429514 chrX 18434806 18434835 Transpac 6 5325 3.5 3.0 3.2 1.4 5360 chrX 18429475 intergenic not near genes chrX 18432155 intergenic not near genes chrX 18434835 intergenic not near genes chrX_6_18430001 chrX_18430001 RAL-832 1969 chrX 18486113 18486140 chrX 18486215 18486229 6 96 0.5 2.0 1.2 2.7 116 chrX 18486113 exon psh - chrX 18486171 intron psh - chrX 18486229 intron psh - chrX_6_18485001 chrX_18485001 RAL-832 1970 chrX 18558769 18558794 chrX 18558861 18558896 4 100 1.5 1.5 1.5 1.6 127 chrX 18558769 intron Bx + chrX 18558832 intron Bx + chrX 18558896 intron Bx + chrX_4_18555001 chrX_18555001 RAL-832 1971 chrX 12946233 12946234 chrX 18572525 18572526 5 5626291 15.5 13.0 14.2 0.3 5626293 chrX 12946233 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_5_15755001 chrX_15755001 RAL-832 1972 chrX 18574775 18574826 chrX 18574875 18574926 17 95 3.0 0.5 1.8 6.1 151 chrX 18574775 intergenic not near genes chrX 18574850 intergenic not near genes chrX 18574926 intergenic not near genes chrX_17_18570001 chrX_18570001 RAL-832 1973 chrX 18644995 18645018 chrX 18645113 18645136 5 118 7.0 2.0 4.5 0.9 141 chrX 18644995 intron Rip11 - chrX 18645066 intron Rip11 - chrX 18645136 intron Rip11 - chrX_5_18645001 chrX_18645001 RAL-832 1974 chrX 18645020 18645048 chrX 18645112 18645155 6 108 3.0 2.0 2.5 1.7 135 chrX 18645020 intron Rip11 - chrX 18645088 intron Rip11 - chrX 18645155 intron Rip11 - chrX_6_18645001 chrX_18645001 RAL-832 1975 chrX 18671220 18671245 chrX 18671312 18671347 6 100 2.0 3.5 2.8 1.6 127 chrX 18671220 intergenic not near genes chrX 18671284 intergenic not near genes chrX 18671347 intergenic not near genes chrX_6_18670001 chrX_18670001 RAL-832 1976 chrX 18698829 18698878 chrX 18698966 18698995 9 134 2.0 5.0 3.5 2.0 166 chrX 18698829 intergenic not near genes chrX 18698912 intergenic not near genes chrX 18698995 intergenic not near genes chrX_9_18695001 chrX_18695001 RAL-832 1977 chrX 18813841 18813856 chrX 18813927 18813959 7 95 5.0 5.5 5.2 1.1 118 chrX 18813841 intron CG42450 + chrX 18813900 intron CG42450 + chrX 18813959 intron CG42450 + chrX_7_18810001 chrX_18810001 RAL-832 1978 chrX 18896504 18896549 chrX 18896630 18896679 7 125 2.5 0.5 1.5 2.8 175 chrX 18896504 3` UTR CG7349 + chrX 18896592 intergenic CG7349 + chrX 18896679 intergenic CG7349 + chrX_7_18895001 chrX_18895001 RAL-832 1979 chrX 18947496 18947533 chrX 18947598 18947646 5 104 6.5 2.0 4.2 1.0 150 chrX 18947496 intron CG43759 + chrX 18947571 intron CG43759 + chrX 18947646 intron CG43759 + chrX_5_18945001 chrX_18945001 RAL-832 1980 chrX 18957055 18957089 chrX 18965738 18965772 roo 8 8682 2.5 2.5 2.5 2.3 8717 chrX 18957055 intron CG43759 + chrX 18961414 intron CG43759 + chrX 18965772 intron CG43759 + chrX_8_18960001 chrX_18960001 RAL-832 1981 chrX 19125678 19125689 chrX 19125827 19125837 4 149 5.0 5.5 5.2 0.6 159 chrX 19125678 intron tgy - chrX 19125758 intron tgy - chrX 19125837 intron tgy - chrX_4_19125001 chrX_19125001 RAL-832 1982 chrX 19125704 19125714 chrX 19125823 19125857 5 142 2.5 5.5 4.0 1.0 153 chrX 19125704 intron tgy - chrX 19125780 intron tgy - chrX 19125857 intron tgy - chrX_5_19125001 chrX_19125001 RAL-832 1983 chrX 19176204 19176228 chrX 19176293 19176317 5 94 3.0 0.0 1.5 2.0 113 chrX 19176204 3` UTR CG7556 - chrX 19176260 3` UTR CG7556 - chrX 19176317 3` UTR CG7556 - chrX_5_19175001 chrX_19175001 RAL-832 1984 chrX 19181997 19182040 chrX 19182128 19182144 7 123 3.5 3.5 3.5 1.6 147 chrX 19181997 3` UTR CG7453 + chrX 19182070 intergenic CG7453 + chrX 19182144 intergenic CG7453 + chrX_7_19180001 chrX_19180001 RAL-832 1985 chrX 19280995 19281014 chrX 19281133 19281163 4 142 0.0 2.5 1.2 1.8 168 chrX 19280995 intergenic CG8034 - chrX 19281079 intergenic CG8034 - chrX 19281163 intergenic CG8034 - chrX_4_19280001 chrX_19280001 RAL-832 1986 chrX 19339730 19339756 chrX 19339826 19339852 13 95 0.0 6.0 3.0 3.2 122 chrX 19339730 intron nAChRalpha7 - chrX 19339791 intron nAChRalpha7 - chrX 19339852 intron nAChRalpha7 - chrX_13_19335001 chrX_19335001 RAL-832 1987 chrX 19356968 19357020 chrX 19358429 19358497 NOF 10 1456 4.5 0.0 2.2 3.1 1529 chrX 19356968 intron kek5 + chrX 19357732 intron kek5 + chrX 19358497 intron kek5 + chrX_10_19355001 chrX_19355001 RAL-832 1988 chrX 19472104 19472138 chrX 19472688 19472719 jockey 5 583 2.5 2.0 2.2 1.6 615 chrX 19472104 intergenic kek5 + chrX 19472412 intergenic kek5 + chrX 19472719 intergenic not near genes chrX_5_19470001 chrX_19470001 RAL-832 1989 chrX 19662022 19662053 chrX 19662264 19662290 6 236 7.0 6.0 6.5 0.8 268 chrX 19662022 intron CG14223 - chrX 19662156 intron CG14223 - chrX 19662290 intron CG14223 - chrX_6_19660001 chrX_19660001 RAL-832 1990 chrX 19710071 19710102 chrX 19711860 19711898 S-element 4 1791 1.0 1.0 1.0 2.0 1827 chrX 19710071 intron meso18E - chrX 19710984 intron meso18E - chrX 19711898 intron meso18E - chrX_4_19710001 chrX_19710001 RAL-832 1991 chrX 19791245 19791264 chrX 19791359 19791366 7 108 1.0 3.5 2.2 2.2 121 chrX 19791245 intergenic not near genes chrX 19791306 intergenic not near genes chrX 19791366 intergenic not near genes chrX_7_19790001 chrX_19790001 RAL-832 1992 chrX 19791268 19791287 chrX 19791357 19791384 4 101 1.0 3.0 2.0 1.3 116 chrX 19791268 intergenic not near genes chrX 19791326 intergenic not near genes chrX 19791384 intergenic not near genes chrX_4_19790001 chrX_19790001 RAL-832 1993 chrX 19881446 19881479 chrX 19881542 19881575 6 94 2.0 5.0 3.5 1.3 129 chrX 19881446 intron Hers + chrX 19881510 intron Hers + chrX 19881575 intron Hers + chrX_6_19880001 chrX_19880001 RAL-832 1994 chrX 19883748 19883795 chrX 19883852 19883872 5 87 3.5 2.5 3.0 1.2 124 chrX 19883748 intron Hers + chrX 19883810 intron Hers + chrX 19883872 intron Hers + chrX_5_19880001 chrX_19880001 RAL-832 1995 chrX 19893740 19893767 chrX 19893905 19893919 5 156 0.5 3.0 1.8 1.8 179 chrX 19893740 intron Hers + chrX 19893830 intron Hers + chrX 19893919 intron Hers + chrX_5_19890001 chrX_19890001 RAL-832 1996 chrX 19981240 19981244 chrX 19981303 19981337 4 80 0.0 2.5 1.2 1.8 97 chrX 19981240 intergenic not near genes chrX 19981288 intergenic not near genes chrX 19981337 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-832 1997 chrX 20041514 20041523 chrX 20041614 20041623 4 100 5.5 3.5 4.5 0.7 109 chrX 20041514 intron Dop2R - chrX 20041568 intron Dop2R - chrX 20041623 intron Dop2R - chrX_4_20040001 chrX_20040001 RAL-832 1998 chrX 20041535 20041567 chrX 20041611 20041635 14 92 1.0 3.0 2.0 4.7 100 chrX 20041535 intron Dop2R - chrX 20041585 intron Dop2R - chrX 20041635 intron Dop2R - chrX_14_20040001 chrX_20040001 RAL-832 1999 chrX 20047321 20047343 chrX 20049607 20049632 4 2287 3.5 5.5 4.5 0.7 2311 chrX 20047321 intron Dop2R - chrX 20048476 intron Dop2R - chrX 20049632 intron Dop2R - chrX_4_20045001 chrX_20045001 RAL-832 2000 chrX 20081027 20081190 chrX 20081152 20081299 5 104 0.0 0.0 0.0 5.0 272 chrX 20081027 intergenic not near genes chrX 20081163 intergenic not near genes chrX 20081299 intergenic not near genes chrX_5_20080001 chrX_20080001 RAL-832 2001 chrX 20124071 20124096 chrX 20124230 20124238 5 150 6.0 2.0 4.0 1.0 167 chrX 20124071 intron CG34331 + chrX 20124154 intron CG34331 + chrX 20124238 intron CG34331 + chrX_5_20120001 chrX_20120001 RAL-832 2002 chrX 20271494 20271507 chrX 20271596 20271606 5 104 5.5 0.0 2.8 1.3 112 chrX 20271494 intergenic not near genes chrX 20271550 intergenic not near genes chrX 20271606 intergenic not near genes chrX_5_20270001 chrX_20270001 RAL-832 2003 chrX 20271508 20271528 chrX 20271594 20271620 4 99 2.0 0.0 1.0 2.0 112 chrX 20271508 intergenic not near genes chrX 20271564 intergenic not near genes chrX 20271620 intergenic not near genes chrX_4_20270001 chrX_20270001 RAL-832 2004 chrX 20312863 20312909 chrX 20312961 20313007 10 90 1.0 5.5 3.2 2.4 144 chrX 20312863 intron CG1504 - chrX 20312935 intron CG1504 - chrX 20313007 intron CG1504 - chrX_10_20310001 chrX_20310001 RAL-832 2005 chrX 20344913 20344944 chrX 20345062 20345068 4 142 2.0 0.0 1.0 2.0 155 chrX 20344913 intergenic not near genes chrX 20344990 intergenic not near genes chrX 20345068 intergenic not near genes chrX_4_20340001 chrX_20340001 RAL-832 2006 chrX 20468008 20468033 chrX 20468106 20468135 6 104 4.5 0.0 2.2 1.9 127 chrX 20468008 intron GstT3 + chrX 20468072 intron GstT3 + chrX 20468135 intron GstT3 + chrX_6_20465001 chrX_20465001 RAL-832 2007 chrX 20528605 20528610 chrX 20528953 20528961 4 359 3.0 4.0 3.5 0.9 356 chrX 20528605 intergenic not near genes chrX 20528783 intergenic not near genes chrX 20528961 intergenic not near genes chrX_4_20525001 chrX_20525001 RAL-832 2008 chrX 20528619 20528630 chrX 20528952 20528998 5 361 1.5 3.5 2.5 1.4 379 chrX 20528619 intergenic not near genes chrX 20528808 intergenic not near genes chrX 20528998 intergenic not near genes chrX_5_20525001 chrX_20525001 RAL-832 2009 chrX 20531675 20531712 chrX 20531785 20531812 4 103 0.5 6.5 3.5 0.9 137 chrX 20531675 intergenic not near genes chrX 20531744 intergenic not near genes chrX 20531812 intergenic not near genes chrX_4_20530001 chrX_20530001 RAL-832 2010 chrX 20635413 20635444 chrX 20635599 20635607 7 179 1.0 4.5 2.8 1.8 194 chrX 20635413 intergenic not near genes chrX 20635510 intergenic not near genes chrX 20635607 intergenic not near genes chrX_7_20635001 chrX_20635001 RAL-832 2011 chrX 20710410 20710437 chrX 20710490 20710504 4 81 0.0 1.5 0.8 2.2 94 chrX 20710410 intergenic not near genes chrX 20710457 intergenic not near genes chrX 20710504 intergenic not near genes chrX_4_20710001 chrX_20710001 RAL-832 2012 chrX 20784006 20784037 chrX 20784128 20784164 4 128 0.5 4.0 2.2 1.2 158 chrX 20784006 intron shakB - chrX 20784085 intron shakB - chrX 20784164 intron shakB - chrX_4_20780001 chrX_20780001 RAL-832 2013 chrX 20836716 20836759 chrX 20844337 20844365 roo 10 7612 1.0 1.5 1.2 4.5 7649 chrX 20836716 intron shakB - chrX 20840540 intron shakB - chrX 20844365 intron shakB - chrX_10_20840001 chrX_20840001 RAL-832 2014 chrX 20940712 20940747 chrX 20942193 20942211 hobo 8 1479 3.0 2.0 2.5 2.3 1499 chrX 20940712 intergenic not near genes chrX 20941462 intergenic not near genes chrX 20942211 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-832 2015 chrX 20947663 20947689 chrX 20948520 20948552 5 859 0.5 5.5 3.0 1.2 889 chrX 20947663 intergenic not near genes chrX 20948108 intergenic not near genes chrX 20948552 intergenic not near genes chrX_5_20945001 chrX_20945001 RAL-832 2016 chrX 20981008 20981043 chrX 20981131 20981156 4 120 4.5 0.5 2.5 1.1 148 chrX 20981008 intergenic not near genes chrX 20981082 intergenic not near genes chrX 20981156 intergenic not near genes chrX_4_20980001 chrX_20980001 RAL-832 2017 chrX 21008636 21008689 chrX 21008744 21008797 9 103 4.5 5.5 5.0 1.5 161 chrX 21008636 intergenic not near genes chrX 21008716 intergenic not near genes chrX 21008797 intergenic not near genes chrX_9_21005001 chrX_21005001 RAL-832 2018 chrX 21029789 21029813 chrX 21029940 21029965 6 157 3.5 5.0 4.2 1.2 176 chrX 21029789 3` UTR CG1529 - chrX 21029877 3` UTR CG1529 - chrX 21029965 3` UTR CG1529 - chrX_6_21025001 chrX_21025001 RAL-832 2019 chrX 21061868 21061883 chrX 21062372 21062388 roo 5 504 6.5 6.5 6.5 0.7 520 chrX 21061868 intron bves + chrX 21062128 intron bves + chrX 21062388 intron,3` UTR bves +,CG32512 - chrX_5_21060001 chrX_21060001 RAL-832 2020 chrX 21086120 21086157 chrX 21087169 21087206 jockey 5 1044 3.0 6.5 4.8 0.9 1086 chrX 21086120 intergenic not near genes chrX 21086663 intergenic not near genes chrX 21087206 intergenic not near genes chrX_5_21085001 chrX_21085001 RAL-832 2021 chrX 21166126 21166142 chrX 21166224 21166240 5 98 6.5 2.5 4.5 0.9 114 chrX 21166126 intergenic not near genes chrX 21166183 intergenic not near genes chrX 21166240 intergenic not near genes chrX_5_21165001 chrX_21165001 RAL-832 2022 chrX 21388387 21388401 chrX 21388541 21388564 5 167 6.0 3.5 4.8 0.9 177 chrX 21388387 intergenic Hlc - chrX 21388476 intergenic mst + chrX 21388564 intergenic mst + chrX_5_21385001 chrX_21385001 RAL-832 2023 chrX 21410643 21410648 chrX 21410742 21410746 4 99 0.5 6.5 3.5 0.9 103 chrX 21410643 intergenic CR45003 - chrX 21410694 intergenic CR45003 - chrX 21410746 intergenic CR45003 - chrX_4_21410001 chrX_21410001 RAL-832 2024 chrX 21455199 21455227 chrX 21455398 21455434 4 200 6.5 0.0 3.2 1.0 235 chrX 21455199 intron CG42343 - chrX 21455316 intron CG42343 - chrX 21455434 intron CG42343 - chrX_4_21455001 chrX_21455001 RAL-832 2025 chrX 21458694 21458724 chrX 21464132 21464180 Ivk 6 5452 5.5 5.0 5.2 1.0 5486 chrX 21458694 intergenic not near genes chrX 21461437 intergenic not near genes chrX 21464180 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-832 2026 chrX 21516991 21517021 chrX 21517064 21517096 9 78 1.5 3.0 2.2 2.8 105 chrX 21516991 intron CR45082 - chrX 21517044 intron CR45082 - chrX 21517096 intron CR45082 - chrX_9_21515001 chrX_21515001 RAL-832 2027 chrX 21668239 21668283 chrX 21668344 21668388 7 100 24.0 21.0 22.5 0.3 149 chrX 21668239 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668388 intergenic not near genes chrX_7_21665001 chrX_21665001 RAL-832 2028 chrX 22478876 22478895 chrX 22479019 22479048 8 149 0.0 1.5 0.8 4.4 172 chrX 22478876 intron CG12576 - chrX 22478962 intron CG12576 - chrX 22479048 intron CG12576 - chrX_8_22475001 chrX_22475001 RAL-832 2029 chrX 22522624 22522659 chrX 22525464 22525483 NOF 4 2836 2.5 1.0 1.8 1.4 2859 chrX 22522624 intron CG17600 + chrX 22524054 intron CG17600 + chrX 22525483 intron CG17600 + chrX_4_22520001 chrX_22520001 RAL-832 2030 chrX 22677278 22677326 chrX 22677507 22677540 7 218 1.5 1.0 1.2 3.2 262 chrX 22677278 intron CR44997 + chrX 22677409 intron CR44997 + chrX 22677540 intron CR44997 + chrX_7_22675001 chrX_22675001 RAL-832 2031 chrX 22697478 22697511 chrX 22701795 22701828 Juan 6 4315 4.0 3.5 3.8 1.2 4350 chrX 22697478 intron CR44997 + chrX 22699653 intron CR44997 + chrX 22701828 intron CR44997 + chrX_6_22695001 chrX_22695001 RAL-832 2032 chrX 22764355 22764398 chrX 22764471 22764494 6 111 3.0 2.0 2.5 1.7 139 chrX 22764355 intron CR44997 + chrX 22764424 intron CR44997 + chrX 22764494 intron CR44997 + chrX_6_22760001 chrX_22760001 RAL-832 2033 chrX 22824230 22824445 chrX 22824355 22824578 12 139 0.5 2.0 1.2 5.5 348 chrX 22824230 intergenic fog - chrX 22824404 3` UTR fog - chrX 22824578 3` UTR fog - chrX_12_22820001 chrX_22820001 RAL-832 2034 chrX 22867983 22868010 chrX 22868092 22868152 8 131 0.5 1.0 0.8 4.4 169 chrX 22867983 exon CG42346 + chrX 22868068 intron CG42346 + chrX 22868152 intron CG42346 + chrX_8_22865001 chrX_22865001 RAL-832 2035 chrX 22987105 22987136 chrX 22989763 22989795 Burdock 6 2660 2.5 3.0 2.8 1.6 2690 chrX 22987105 intron,intron stnA -,stnB - chrX 22988450 intron,intron stnA -,stnB - chrX 22989795 intron,intron stnA -,stnB - chrX_6_22985001 chrX_22985001 RAL-832 2036 chrX 22996318 22996337 chrX 23003543 23003581 roo 8 7242 2.5 3.5 3.0 2.0 7263 chrX 22996318 intron,intron stnA -,stnB - chrX 22999950 intron,intron stnA -,stnB - chrX 23003581 intron,intron stnA -,stnB - chrX_8_22995001 chrX_22995001 RAL-832 2037 chrX 23036361 23036413 chrX 23037782 23037796 pogo 5 1407 2.5 0.5 1.5 2.0 1435 chrX 23036361 intron CG12061 + chrX 23037078 intron CG12061 + chrX 23037796 intron CG12061 + chrX_5_23035001 chrX_23035001 RAL-832 2038 chrY 1419899 1419919 chrY 1420156 1420192 6 268 14.0 14.0 14.0 0.4 293 chrY 1419899 intergenic not near genes chrY 1420046 intergenic not near genes chrY 1420192 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-832