SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47454 47486 chr2L 52573 52587 jockey 9 5126 2.0 12.0 7.0 1.1 5133 chr2L 47454 intron Cda5 - chr2L 50020 intron Cda5 - chr2L 52587 intron Cda5 - chr2L_9_50001 chr2L_50001 RAL-822 2 chr2L 314278 314310 chr2L 314379 314396 5 91 4.0 6.5 5.2 0.8 118 chr2L 314278 intron Plc21C + chr2L 314337 intron Plc21C + chr2L 314396 intron Plc21C + chr2L_5_310001 chr2L_310001 RAL-822 3 chr2L 318253 318320 chr2L 318613 318670 13 353 3.5 1.0 2.2 4.1 417 chr2L 318253 intron Plc21C + chr2L 318462 intron,exon Plc21C +,CG11912 - chr2L 318670 intron,exon Plc21C +,CG11912 - chr2L_13_315001 chr2L_315001 RAL-822 4 chr2L 347863 347918 chr2L 355388 355453 blood 8 7527 3.0 7.5 5.2 1.3 7590 chr2L 347863 3` UTR Plc21C + chr2L 351658 intron Plc21C + chr2L 355453 3` UTR Plc21C + chr2L_8_350001 chr2L_350001 RAL-822 5 chr2L 407912 407973 chr2L 408028 408089 20 114 9.0 4.5 6.8 2.6 177 chr2L 407912 3` UTR RpI135 + chr2L 408000 intergenic AP-2alpha -,RpI135 + chr2L 408089 3` UTR AP-2alpha - chr2L_20_405001 chr2L_405001 RAL-822 6 chr2L 630302 630324 chr2L 630415 630440 5 117 0.0 1.0 0.5 3.3 138 chr2L 630302 intergenic not near genes chr2L 630371 intergenic not near genes chr2L 630440 intergenic not near genes chr2L_5_630001 chr2L_630001 RAL-822 7 chr2L 664797 664811 chr2L 665011 665013 6 230 1.0 0.5 0.8 3.3 216 chr2L 664797 intron ds - chr2L 664905 intron ds - chr2L 665013 intron ds - chr2L_6_660001 chr2L_660001 RAL-822 8 chr2L 666275 666289 chr2L 666364 666399 4 104 2.0 0.0 1.0 2.0 124 chr2L 666275 intron ds - chr2L 666337 intron ds - chr2L 666399 intron ds - chr2L_4_665001 chr2L_665001 RAL-822 9 chr2L 698720 698779 chr2L 698888 698895 7 154 0.5 4.0 2.2 2.2 175 chr2L 698720 intron ds - chr2L 698808 intron ds - chr2L 698895 intron ds - chr2L_7_695001 chr2L_695001 RAL-822 10 chr2L 764524 764571 chr2L 764659 764700 11 132 6.0 1.5 3.8 2.3 176 chr2L 764524 intergenic not near genes chr2L 764612 intergenic not near genes chr2L 764700 intergenic not near genes chr2L_11_760001 chr2L_760001 RAL-822 11 chr2L 770461 770475 chr2L 772246 772250 Bari1 5 1791 4.5 0.0 2.2 1.6 1789 chr2L 770461 intergenic not near genes chr2L 771356 intergenic not near genes chr2L 772250 intergenic CR44614 + chr2L_5_770001 chr2L_770001 RAL-822 12 chr2L 877853 877873 chr2L 877941 877956 6 94 2.0 6.0 4.0 1.2 103 chr2L 877853 3` UTR,exon CG15824 -,ninaA + chr2L 877904 3` UTR,intron CG15824 -,ninaA + chr2L 877956 3` UTR,intron CG15824 -,ninaA + chr2L_6_875001 chr2L_875001 RAL-822 13 chr2L 919911 919926 chr2L 920011 920037 6 106 1.5 0.0 0.8 3.3 126 chr2L 919911 intergenic not near genes chr2L 919974 intergenic not near genes chr2L 920037 intergenic not near genes chr2L_6_915001 chr2L_915001 RAL-822 14 chr2L 922431 922471 chr2L 922547 922586 11 111 6.0 2.0 4.0 2.2 155 chr2L 922431 intergenic CG4341 + chr2L 922508 intergenic CG4341 + chr2L 922586 intergenic CG4341 + chr2L_11_920001 chr2L_920001 RAL-822 15 chr2L 922475 922494 chr2L 922546 922567 9 98 2.0 2.0 2.0 3.0 92 chr2L 922475 intergenic CG4341 + chr2L 922521 intergenic CG4341 + chr2L 922567 intergenic CG4341 + chr2L_9_920001 chr2L_920001 RAL-822 16 chr2L 931624 931664 chr2L 931712 931761 7 91 1.0 3.0 2.0 2.3 137 chr2L 931624 intron CG4341 + chr2L 931692 intron CG4341 + chr2L 931761 intron CG4341 + chr2L_7_930001 chr2L_930001 RAL-822 17 chr2L 953475 953525 chr2L 953584 953590 9 104 1.5 4.0 2.8 2.4 115 chr2L 953475 exon CG4341 + chr2L 953532 intron CG4341 + chr2L 953590 intron CG4341 + chr2L_9_950001 chr2L_950001 RAL-822 18 chr2L 964524 964574 chr2L 964641 964682 22 113 6.5 5.5 6.0 3.1 158 chr2L 964524 intergenic not near genes chr2L 964603 intergenic not near genes chr2L 964682 intergenic not near genes chr2L_22_960001 chr2L_960001 RAL-822 19 chr2L 976853 976909 chr2L 984518 984580 roo 8 7665 4.0 3.0 3.5 1.8 7727 chr2L 976853 intergenic not near genes chr2L 980716 intergenic not near genes chr2L 984580 intergenic not near genes chr2L_8_980001 chr2L_980001 RAL-822 20 chr2L 996691 996718 chr2L 1005821 1005837 roo 6 9124 2.5 5.5 4.0 1.2 9146 chr2L 996691 intergenic not near genes chr2L 1001264 intergenic not near genes chr2L 1005837 intergenic not near genes chr2L_6_1000001 chr2L_1000001 RAL-822 21 chr2L 1035524 1035594 chr2L 1035636 1035678 10 99 4.0 1.5 2.8 2.6 154 chr2L 1035524 intron IA-2 - chr2L 1035601 intron IA-2 - chr2L 1035678 intron IA-2 - chr2L_10_1035001 chr2L_1035001 RAL-822 22 chr2L 1042583 1042599 chr2L 1042695 1042703 8 110 1.5 0.0 0.8 4.4 120 chr2L 1042583 intron IA-2 - chr2L 1042643 intron IA-2 - chr2L 1042703 intron IA-2 - chr2L_8_1040001 chr2L_1040001 RAL-822 23 chr2L 1066073 1066127 chr2L 1066179 1066218 10 89 3.0 4.0 3.5 2.2 145 chr2L 1066073 intron S - chr2L 1066146 intron S - chr2L 1066218 intron S - chr2L_10_1065001 chr2L_1065001 RAL-822 24 chr2L 1137624 1137679 chr2L 1137838 1137894 17 211 6.5 5.5 6.0 2.4 270 chr2L 1137624 intron CG4577 + chr2L 1137759 intron CG4577 + chr2L 1137894 intron CG4577 + chr2L_17_1135001 chr2L_1135001 RAL-822 25 chr2L 1164247 1164283 chr2L 1164365 1164401 9 123 2.5 1.0 1.8 3.2 154 chr2L 1164247 intergenic IntS14 +,CG5080 - chr2L 1164324 intergenic IntS14 +,CG5080 - chr2L 1164401 intergenic IntS14 + chr2L_9_1160001 chr2L_1160001 RAL-822 26 chr2L 1178665 1178705 chr2L 1178763 1178819 9 110 7.0 2.0 4.5 1.6 154 chr2L 1178665 intron CG4896 + chr2L 1178742 intron CG4896 + chr2L 1178819 intron CG4896 + chr2L_9_1175001 chr2L_1175001 RAL-822 27 chr2L 1199852 1199866 chr2L 1199985 1200009 4 138 0.5 7.0 3.8 0.8 157 chr2L 1199852 3` UTR CG43348 + chr2L 1199930 intergenic CG43348 +,CG43349 + chr2L 1200009 intergenic CG43348 +,CG43349 + chr2L_4_1195001 chr2L_1195001 RAL-822 28 chr2L 1220109 1220145 chr2L 1227608 1227645 blood 7 7494 8.5 5.0 6.8 0.9 7536 chr2L 1220109 intron CG42329 + chr2L 1223877 intron CG42329 + chr2L 1227645 intron CG42329 + chr2L_7_1220001 chr2L_1220001 RAL-822 29 chr2L 1220147 1220159 chr2L 1227593 1227652 blood 4 7475 4.0 1.5 2.8 1.1 7505 chr2L 1220147 intron CG42329 + chr2L 1223900 intron CG42329 + chr2L 1227652 intron CG42329 + chr2L_4_1220001 chr2L_1220001 RAL-822 30 chr2L 1237964 1238003 chr2L 1238073 1238126 5 116 0.5 0.0 0.2 4.2 162 chr2L 1237964 intergenic not near genes chr2L 1238045 intergenic not near genes chr2L 1238126 intergenic not near genes chr2L_5_1235001 chr2L_1235001 RAL-822 31 chr2L 1301749 1301781 chr2L 1302306 1302340 gypsy 4 564 0.0 7.5 3.8 0.8 591 chr2L 1301749 intergenic not near genes chr2L 1302044 intergenic not near genes chr2L 1302340 intergenic not near genes chr2L_4_1300001 chr2L_1300001 RAL-822 32 chr2L 1336891 1336938 chr2L 1337234 1337263 12 338 5.0 2.5 3.8 2.5 372 chr2L 1336891 intergenic not near genes chr2L 1337077 intergenic not near genes chr2L 1337263 intergenic not near genes chr2L_12_1335001 chr2L_1335001 RAL-822 33 chr2L 1404637 1404677 chr2L 1404721 1404739 8 91 2.0 3.5 2.8 2.1 102 chr2L 1404637 intron lea - chr2L 1404688 intron lea - chr2L 1404739 intron lea - chr2L_8_1400001 chr2L_1400001 RAL-822 34 chr2L 1450693 1450725 chr2L 1450785 1450801 5 82 2.0 4.0 3.0 1.2 108 chr2L 1450693 intergenic not near genes chr2L 1450747 intergenic not near genes chr2L 1450801 intergenic not near genes chr2L_5_1450001 chr2L_1450001 RAL-822 35 chr2L 1514570 1514582 chr2L 1514676 1514677 6 110 9.5 2.0 5.8 0.9 107 chr2L 1514570 intergenic not near genes chr2L 1514624 intergenic not near genes chr2L 1514677 intergenic not near genes chr2L_6_1510001 chr2L_1510001 RAL-822 36 chr2L 1514597 1514609 chr2L 1514668 1514700 5 82 5.5 1.5 3.5 1.1 103 chr2L 1514597 intergenic not near genes chr2L 1514648 intergenic not near genes chr2L 1514700 intergenic not near genes chr2L_5_1510001 chr2L_1510001 RAL-822 37 chr2L 1570668 1570703 chr2L 1573572 1573587 F-element 11 2904 3.5 2.5 3.0 2.8 2919 chr2L 1570668 intron haf + chr2L 1572128 intron haf + chr2L 1573587 intron haf + chr2L_11_1570001 chr2L_1570001 RAL-822 38 chr2L 1615376 1615392 chr2L 1615480 1615503 5 112 0.0 0.5 0.2 4.2 127 chr2L 1615376 intergenic not near genes chr2L 1615440 intergenic not near genes chr2L 1615503 intergenic not near genes chr2L_5_1615001 chr2L_1615001 RAL-822 39 chr2L 1643460 1643469 chr2L 1643537 1643581 5 91 0.0 0.0 0.0 5.0 121 chr2L 1643460 intergenic not near genes chr2L 1643520 intergenic not near genes chr2L 1643581 intergenic not near genes chr2L_5_1640001 chr2L_1640001 RAL-822 40 chr2L 1678930 1678999 chr2L 1686441 1686468 blood 12 7505 0.0 8.0 4.0 2.4 7538 chr2L 1678930 intron chinmo + chr2L 1682699 intron chinmo + chr2L 1686468 intron chinmo + chr2L_12_1680001 chr2L_1680001 RAL-822 41 chr2L 1711342 1711370 chr2L 1711685 1711693 mdg3 5 339 2.5 4.5 3.5 1.1 351 chr2L 1711342 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711518 3` UTR frtz - chr2L 1711693 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 RAL-822 42 chr2L 1724791 1724835 chr2L 1724898 1724930 13 111 4.5 5.0 4.8 2.2 139 chr2L 1724791 3` UTR Eno - chr2L 1724860 3` UTR Eno - chr2L 1724930 3` UTR Eno - chr2L_13_1720001 chr2L_1720001 RAL-822 43 chr2L 1744814 1744826 chr2L 1744892 1744913 4 84 2.0 2.0 2.0 1.3 99 chr2L 1744814 intron CG17646 + chr2L 1744864 intron CG17646 + chr2L 1744913 intron CG17646 + chr2L_4_1740001 chr2L_1740001 RAL-822 44 chr2L 1800482 1800500 chr2L 1800954 1800956 4 464 5.5 0.5 3.0 1.0 474 chr2L 1800482 intergenic not near genes chr2L 1800719 intergenic not near genes chr2L 1800956 intergenic not near genes chr2L_4_1800001 chr2L_1800001 RAL-822 45 chr2L 1842259 1842308 chr2L 1842373 1842419 7 100 1.5 4.0 2.8 1.8 160 chr2L 1842259 intron wry + chr2L 1842339 intron wry + chr2L 1842419 intron wry + chr2L_7_1840001 chr2L_1840001 RAL-822 46 chr2L 1925472 1925501 chr2L 1925569 1925598 8 100 3.0 2.0 2.5 2.3 126 chr2L 1925472 intron CG7337 + chr2L 1925535 intron CG7337 + chr2L 1925598 intron CG7337 + chr2L_8_1925001 chr2L_1925001 RAL-822 47 chr2L 2001786 2001813 chr2L 2001899 2001917 6 102 2.0 9.5 5.8 0.9 131 chr2L 2001786 intron,5` UTR CG33543 -,CR43464 + chr2L 2001852 intron,5` UTR CG33543 -,CR43464 + chr2L 2001917 intron,5` UTR CG33543 -,CR43464 + chr2L_6_2000001 chr2L_2000001 RAL-822 48 chr2L 2007838 2007870 chr2L 2007975 2008013 9 139 2.5 5.5 4.0 1.8 175 chr2L 2007838 intergenic CR45712 + chr2L 2007926 intergenic CR45712 +,Nplp4 + chr2L 2008013 intergenic CR45712 +,Nplp4 + chr2L_9_2005001 chr2L_2005001 RAL-822 49 chr2L 2049186 2049237 chr2L 2049300 2049335 14 108 1.5 4.0 2.8 3.7 149 chr2L 2049186 intergenic not near genes chr2L 2049260 intergenic not near genes chr2L 2049335 intergenic not near genes chr2L_14_2045001 chr2L_2045001 RAL-822 50 chr2L 2100390 2100395 chr2L 2109540 2109577 roo 4 9161 4.0 2.0 3.0 1.0 9187 chr2L 2100390 intron dpr3 - chr2L 2104984 intron dpr3 - chr2L 2109577 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-822 51 chr2L 2155237 2155301 chr2L 2155349 2155392 11 101 4.5 2.5 3.5 2.4 155 chr2L 2155237 3` UTR AIF + chr2L 2155314 3` UTR AIF + chr2L 2155392 intergenic AIF +,CG15382 + chr2L_11_2155001 chr2L_2155001 RAL-822 52 chr2L 2177357 2177407 chr2L 2177462 2177497 7 95 1.0 4.0 2.5 2.0 140 chr2L 2177357 intron aop - chr2L 2177427 intron aop - chr2L 2177497 intron aop - chr2L_7_2175001 chr2L_2175001 RAL-822 53 chr2L 2256439 2256477 chr2L 2256554 2256567 6 108 0.0 6.0 3.0 1.5 128 chr2L 2256439 intergenic not near genes chr2L 2256503 intergenic not near genes chr2L 2256567 intergenic not near genes chr2L_6_2255001 chr2L_2255001 RAL-822 54 chr2L 2294054 2294075 chr2L 2299244 2299280 copia 4 5195 0.0 1.0 0.5 2.7 5226 chr2L 2294054 intergenic not near genes chr2L 2296667 intergenic not near genes chr2L 2299280 intergenic not near genes chr2L_4_2295001 chr2L_2295001 RAL-822 55 chr2L 2317090 2317112 chr2L 2317296 2317318 5 203 23.0 18.5 20.8 0.2 228 chr2L 2317090 intron,intron CG9967 -,eys + chr2L 2317204 intron,intron CG9967 -,eys + chr2L 2317318 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 RAL-822 56 chr2L 2380411 2380462 chr2L 2380517 2380553 10 102 2.5 1.0 1.8 3.6 142 chr2L 2380411 3` UTR Atxn7 + chr2L 2380482 3` UTR Atxn7 + chr2L 2380553 intergenic Atxn7 + chr2L_10_2380001 chr2L_2380001 RAL-822 57 chr2L 2431932 2431979 chr2L 2432324 2432375 12 396 2.5 2.0 2.2 3.8 443 chr2L 2431932 intron dpp + chr2L 2432154 intron dpp + chr2L 2432375 intron dpp + chr2L_12_2430001 chr2L_2430001 RAL-822 58 chr2L 2504202 2504228 chr2L 2504305 2504311 11 106 2.5 4.0 3.2 2.6 109 chr2L 2504202 intergenic not near genes chr2L 2504256 intergenic not near genes chr2L 2504311 intergenic not near genes chr2L_11_2500001 chr2L_2500001 RAL-822 59 chr2L 2548054 2548073 chr2L 2548194 2548214 6 135 2.5 3.0 2.8 1.6 160 chr2L 2548054 intergenic not near genes chr2L 2548134 intergenic not near genes chr2L 2548214 intergenic not near genes chr2L_6_2545001 chr2L_2545001 RAL-822 60 chr2L 2565537 2565563 chr2L 2571630 2571671 297 12 6099 2.0 8.0 5.0 2.0 6134 chr2L 2565537 exon Cyp309a2 - chr2L 2568604 intron Cyp309a2 - chr2L 2571671 exon Cyp309a2 - chr2L_12_2565001 chr2L_2565001 RAL-822 61 chr2L 2619216 2619246 chr2L 2619302 2619359 12 114 3.0 2.0 2.5 3.4 143 chr2L 2619216 intergenic not near genes chr2L 2619288 intergenic not near genes chr2L 2619359 intergenic not near genes chr2L_12_2615001 chr2L_2615001 RAL-822 62 chr2L 2709304 2709313 chr2L 2709402 2709406 5 100 3.0 0.5 1.8 1.8 102 chr2L 2709304 intron CG31690 + chr2L 2709355 intron CG31690 + chr2L 2709406 intron CG31690 + chr2L_5_2705001 chr2L_2705001 RAL-822 63 chr2L 2715668 2715697 chr2L 2715777 2715788 10 105 4.0 7.5 5.8 1.5 120 chr2L 2715668 intron CG31690 + chr2L 2715728 intron CG31690 + chr2L 2715788 intron CG31690 + chr2L_10_2715001 chr2L_2715001 RAL-822 64 chr2L 2725153 2725163 chr2L 2725263 2725270 4 112 6.0 12.5 9.2 0.4 117 chr2L 2725153 intergenic not near genes chr2L 2725212 intergenic CG31689 + chr2L 2725270 intergenic CG31689 + chr2L_4_2725001 chr2L_2725001 RAL-822 65 chr2L 2800579 2800607 chr2L 2800689 2800714 5 108 3.0 1.0 2.0 1.7 135 chr2L 2800579 intergenic not near genes chr2L 2800646 intergenic not near genes chr2L 2800714 intergenic not near genes chr2L_5_2800001 chr2L_2800001 RAL-822 66 chr2L 2873415 2873467 chr2L 2873518 2873565 7 107 0.0 3.5 1.8 2.5 150 chr2L 2873415 intron CG31694 - chr2L 2873490 intron CG31694 - chr2L 2873565 intron CG31694 - chr2L_7_2870001 chr2L_2870001 RAL-822 67 chr2L 2937389 2937451 chr2L 2937501 2937512 17 101 5.0 2.0 3.5 3.8 123 chr2L 2937389 intron lilli + chr2L 2937450 intron lilli + chr2L 2937512 intron lilli + chr2L_17_2935001 chr2L_2935001 RAL-822 68 chr2L 3049206 3049264 chr2L 3049327 3049347 21 118 5.5 2.5 4.0 4.2 141 chr2L 3049206 intron v(2)k05816 + chr2L 3049276 intron v(2)k05816 + chr2L 3049347 intron v(2)k05816 + chr2L_21_3045001 chr2L_3045001 RAL-822 69 chr2L 3073000 3073010 chr2L 3078238 3078247 copia 4 5238 11.0 3.5 7.2 0.5 5247 chr2L 3073000 intron toc - chr2L 3075624 intron toc - chr2L 3078247 intron toc - chr2L_4_3075001 chr2L_3075001 RAL-822 70 chr2L 3073016 3073053 chr2L 3078233 3078281 copia 13 5231 6.5 3.5 5.0 2.2 5265 chr2L 3073016 intron toc - chr2L 3075648 intron toc - chr2L 3078281 intron toc - chr2L_13_3075001 chr2L_3075001 RAL-822 71 chr2L 3108842 3108871 chr2L 3108953 3108983 7 111 4.5 2.5 3.5 1.6 141 chr2L 3108842 exon toc - chr2L 3108912 intron toc - chr2L 3108983 intron toc - chr2L_7_3105001 chr2L_3105001 RAL-822 72 chr2L 3108872 3108895 chr2L 3108949 3109001 9 99 2.5 2.0 2.2 2.8 129 chr2L 3108872 intron toc - chr2L 3108936 intron toc - chr2L 3109001 intron toc - chr2L_9_3105001 chr2L_3105001 RAL-822 73 chr2L 3121978 3121995 chr2L 3122087 3122116 4 115 6.5 8.5 7.5 0.5 138 chr2L 3121978 intron toc - chr2L 3122047 intron toc - chr2L 3122116 intron toc - chr2L_4_3120001 chr2L_3120001 RAL-822 74 chr2L 3186435 3186502 chr2L 3186556 3186622 14 115 1.5 3.5 2.5 4.0 187 chr2L 3186435 intron CG34393 - chr2L 3186528 intron CG34393 - chr2L 3186622 intron CG34393 - chr2L_14_3185001 chr2L_3185001 RAL-822 75 chr2L 3202715 3202767 chr2L 3210179 3210210 mdg1 10 7458 4.0 0.0 2.0 3.3 7495 chr2L 3202715 intergenic not near genes chr2L 3206462 intergenic not near genes chr2L 3210210 intergenic CR45336 + chr2L_10_3205001 chr2L_3205001 RAL-822 76 chr2L 3251490 3251521 chr2L 3259059 3259067 springer 8 7578 4.0 3.0 3.5 1.8 7577 chr2L 3251490 intergenic not near genes chr2L 3255278 intergenic not near genes chr2L 3259067 intergenic not near genes chr2L_8_3255001 chr2L_3255001 RAL-822 77 chr2L 3272954 3272966 chr2L 3273053 3273077 4 103 0.0 6.0 3.0 1.0 123 chr2L 3272954 intergenic not near genes chr2L 3273016 intergenic not near genes chr2L 3273077 intergenic not near genes chr2L_4_3270001 chr2L_3270001 RAL-822 78 chr2L 3291225 3291270 chr2L 3291322 3291379 4 109 4.5 6.0 5.2 0.6 154 chr2L 3291225 intergenic CG9664 - chr2L 3291302 3` UTR CG9664 - chr2L 3291379 3` UTR CG9664 - chr2L_4_3290001 chr2L_3290001 RAL-822 79 chr2L 3388571 3388631 chr2L 3388846 3388874 pogo 22 270 5.0 4.0 4.5 4.0 303 chr2L 3388571 intergenic CG42460 - chr2L 3388722 intergenic CG42460 - chr2L 3388874 intergenic CG42460 -,CR44791 + chr2L_22_3385001 chr2L_3385001 RAL-822 80 chr2L 3556982 3557038 chr2L 3557098 3557103 7 93 4.5 2.0 3.2 1.7 121 chr2L 3556982 intergenic not near genes chr2L 3557042 intergenic not near genes chr2L 3557103 intergenic not near genes chr2L_7_3555001 chr2L_3555001 RAL-822 81 chr2L 3582884 3582910 chr2L 3582971 3582998 9 89 2.0 4.0 3.0 2.2 114 chr2L 3582884 intergenic not near genes chr2L 3582941 intergenic not near genes chr2L 3582998 intergenic not near genes chr2L_9_3580001 chr2L_3580001 RAL-822 82 chr2L 3584685 3584698 chr2L 3584749 3584800 6 96 3.0 3.0 3.0 1.5 115 chr2L 3584685 intergenic not near genes chr2L 3584742 intergenic not near genes chr2L 3584800 intergenic not near genes chr2L_6_3580001 chr2L_3580001 RAL-822 83 chr2L 3638116 3638167 chr2L 3638237 3638250 8 105 4.5 1.0 2.8 2.1 134 chr2L 3638116 intron for - chr2L 3638183 intron for - chr2L 3638250 intron for - chr2L_8_3635001 chr2L_3635001 RAL-822 84 chr2L 3649766 3649805 chr2L 3654988 3655042 copia 8 5227 0.0 3.5 1.8 2.9 5276 chr2L 3649766 intron for - chr2L 3652404 intron for - chr2L 3655042 intron for - chr2L_8_3650001 chr2L_3650001 RAL-822 85 chr2L 3702877 3702923 chr2L 3702997 3703012 7 103 1.0 4.5 2.8 1.8 135 chr2L 3702877 5` UTR CR44311 + chr2L 3702944 5` UTR CR44311 + chr2L 3703012 intergenic CR44311 + chr2L_7_3700001 chr2L_3700001 RAL-822 86 chr2L 3783222 3783280 chr2L 3783342 3783406 9 121 1.0 6.5 3.8 1.9 184 chr2L 3783222 exon bowl + chr2L 3783314 3` UTR bowl + chr2L 3783406 3` UTR bowl + chr2L_9_3780001 chr2L_3780001 RAL-822 87 chr2L 3785611 3785633 chr2L 3786373 3786378 7 756 2.0 11.5 6.8 0.9 767 chr2L 3785611 3` UTR CG31960 + chr2L 3785994 exon CG31958 + chr2L 3786378 intergenic CG31958 + chr2L_7_3785001 chr2L_3785001 RAL-822 88 chr2L 3819002 3819049 chr2L 3819116 3819148 10 114 1.5 0.0 0.8 5.6 146 chr2L 3819002 intergenic CR44077 + chr2L 3819075 intergenic not near genes chr2L 3819148 intergenic not near genes chr2L_10_3815001 chr2L_3815001 RAL-822 89 chr2L 3883590 3883630 chr2L 3883753 3883803 13 168 5.0 7.5 6.2 1.8 213 chr2L 3883590 intron capu - chr2L 3883696 intron capu - chr2L 3883803 intron capu - chr2L_13_3880001 chr2L_3880001 RAL-822 90 chr2L 3898254 3898306 chr2L 3898357 3898413 9 107 0.0 2.0 1.0 4.5 159 chr2L 3898254 intron capu - chr2L 3898334 intron capu - chr2L 3898413 intron capu - chr2L_9_3895001 chr2L_3895001 RAL-822 91 chr2L 3908393 3908410 chr2L 3908654 3908702 6 269 1.0 1.0 1.0 3.0 309 chr2L 3908393 intron fred - chr2L 3908548 intron fred - chr2L 3908702 intron fred - chr2L_6_3905001 chr2L_3905001 RAL-822 92 chr2L 3908411 3908419 chr2L 3908650 3908690 4 271 1.0 0.5 0.8 2.2 279 chr2L 3908411 intron fred - chr2L 3908550 intron fred - chr2L 3908690 intron fred - chr2L_4_3905001 chr2L_3905001 RAL-822 93 chr2L 3938342 3938357 chr2L 3938465 3938480 5 123 5.0 0.0 2.5 1.4 138 chr2L 3938342 intron fred - chr2L 3938411 intron fred - chr2L 3938480 intron fred - chr2L_5_3935001 chr2L_3935001 RAL-822 94 chr2L 3943779 3943819 chr2L 3943905 3943945 7 121 1.0 7.0 4.0 1.4 166 chr2L 3943779 intron fred - chr2L 3943862 intron fred - chr2L 3943945 intron fred - chr2L_7_3940001 chr2L_3940001 RAL-822 95 chr2L 3950077 3950105 chr2L 3950174 3950216 7 103 1.5 1.0 1.2 3.2 139 chr2L 3950077 intron fred - chr2L 3950146 intron fred - chr2L 3950216 intron fred - chr2L_7_3950001 chr2L_3950001 RAL-822 96 chr2L 4001623 4001675 chr2L 4001756 4001795 13 127 1.5 2.0 1.8 4.6 172 chr2L 4001623 intergenic CR45344 + chr2L 4001709 intergenic CR45344 + chr2L 4001795 intergenic CR45344 + chr2L_13_4000001 chr2L_4000001 RAL-822 97 chr2L 4037772 4037804 chr2L 4037894 4037915 9 121 4.5 3.0 3.8 1.9 143 chr2L 4037772 intron ed + chr2L 4037844 intron ed + chr2L 4037915 intron ed + chr2L_9_4035001 chr2L_4035001 RAL-822 98 chr2L 4150631 4150656 chr2L 4150701 4150730 5 81 1.0 4.0 2.5 1.4 99 chr2L 4150631 exon CG2955 + chr2L 4150680 exon CG2955 + chr2L 4150730 exon CG2955 + chr2L_5_4150001 chr2L_4150001 RAL-822 99 chr2L 4155611 4155629 chr2L 4155857 4155891 5 263 0.0 5.0 2.5 1.4 280 chr2L 4155611 intergenic not near genes chr2L 4155751 intergenic not near genes chr2L 4155891 intergenic not near genes chr2L_5_4155001 chr2L_4155001 RAL-822 100 chr2L 4317881 4317898 chr2L 4317963 4317984 5 98 6.5 3.5 5.0 0.8 103 chr2L 4317881 intron tutl + chr2L 4317932 intron tutl + chr2L 4317984 intron tutl + chr2L_5_4315001 chr2L_4315001 RAL-822 101 chr2L 4345466 4345516 chr2L 4345569 4345619 9 103 3.5 3.0 3.2 2.1 153 chr2L 4345466 3` UTR Atet + chr2L 4345542 3` UTR Atet + chr2L 4345619 3` UTR Atet + chr2L_9_4345001 chr2L_4345001 RAL-822 102 chr2L 4470837 4470848 chr2L 4470944 4470960 5 110 8.5 4.0 6.2 0.7 123 chr2L 4470837 intron ine - chr2L 4470898 intron ine - chr2L 4470960 intron ine - chr2L_5_4470001 chr2L_4470001 RAL-822 103 chr2L 4470850 4470886 chr2L 4470940 4470998 10 109 4.5 3.5 4.0 2.0 148 chr2L 4470850 intron ine - chr2L 4470924 intron ine - chr2L 4470998 exon ine - chr2L_10_4470001 chr2L_4470001 RAL-822 104 chr2L 4601671 4601726 chr2L 4609147 4609192 mdg1 18 7464 7.5 0.5 4.0 3.6 7521 chr2L 4601671 intron dp - chr2L 4605432 intron dp - chr2L 4609192 intron dp - chr2L_18_4605001 chr2L_4605001 RAL-822 105 chr2L 4661827 4661849 chr2L 4669429 4669459 opus 4 7607 6.5 8.0 7.2 0.5 7632 chr2L 4661827 intergenic not near genes chr2L 4665643 intergenic not near genes chr2L 4669459 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-822 106 chr2L 4793281 4793322 chr2L 4793611 4793652 4 325 1.0 2.5 1.8 1.4 371 chr2L 4793281 intron CG15630 - chr2L 4793466 intron CG15630 - chr2L 4793652 exon CG15630 - chr2L_4_4790001 chr2L_4790001 RAL-822 107 chr2L 4809656 4809677 chr2L 4809779 4809791 4 118 12.5 7.0 9.8 0.4 135 chr2L 4809656 intergenic not near genes chr2L 4809724 intergenic not near genes chr2L 4809791 intergenic not near genes chr2L_4_4805001 chr2L_4805001 RAL-822 108 chr2L 4809678 4809720 chr2L 4809777 4809813 14 117 4.0 6.5 5.2 2.3 135 chr2L 4809678 intergenic not near genes chr2L 4809746 intergenic not near genes chr2L 4809813 intergenic not near genes chr2L_14_4805001 chr2L_4805001 RAL-822 109 chr2L 4819473 4819516 chr2L 4819615 4819669 13 148 3.0 2.5 2.8 3.4 196 chr2L 4819473 intergenic not near genes chr2L 4819571 intergenic not near genes chr2L 4819669 intergenic not near genes chr2L_13_4815001 chr2L_4815001 RAL-822 110 chr2L 4858456 4858478 chr2L 4858568 4858601 10 120 4.0 4.5 4.2 1.9 145 chr2L 4858456 intron pog + chr2L 4858528 intron pog + chr2L 4858601 intron pog + chr2L_10_4855001 chr2L_4855001 RAL-822 111 chr2L 4862261 4862289 chr2L 4862367 4862385 4 100 4.5 3.0 3.8 0.8 124 chr2L 4862261 intron pog + chr2L 4862323 intron pog + chr2L 4862385 intron pog + chr2L_4_4860001 chr2L_4860001 RAL-822 112 chr2L 4862293 4862316 chr2L 4862366 4862372 6 88 0.5 2.5 1.5 2.4 79 chr2L 4862293 intron pog + chr2L 4862332 intron pog + chr2L 4862372 intron pog + chr2L_6_4860001 chr2L_4860001 RAL-822 113 chr2L 4869444 4869470 chr2L 4869552 4869563 6 98 3.0 2.0 2.5 1.7 119 chr2L 4869444 intron pog + chr2L 4869504 intron pog + chr2L 4869563 intron pog + chr2L_6_4865001 chr2L_4865001 RAL-822 114 chr2L 4892890 4892896 chr2L 4892976 4893014 6 109 1.5 8.0 4.8 1.0 124 chr2L 4892890 intron CG3036 + chr2L 4892952 intron CG3036 + chr2L 4893014 intron CG3036 + chr2L_6_4890001 chr2L_4890001 RAL-822 115 chr2L 4918144 4918190 chr2L 4923252 4923336 jockey 5 5137 5.0 0.0 2.5 1.4 5192 chr2L 4918144 intron hoe1 - chr2L 4920740 intron hoe1 - chr2L 4923336 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-822 116 chr2L 4925650 4925694 chr2L 4925752 4925808 7 111 2.5 1.5 2.0 2.3 158 chr2L 4925650 intron hoe1 - chr2L 4925729 intron hoe1 - chr2L 4925808 intron hoe1 - chr2L_7_4925001 chr2L_4925001 RAL-822 117 chr2L 4996066 4996113 chr2L 4996168 4996225 18 109 7.0 6.5 6.8 2.3 159 chr2L 4996066 intron Rtnl1 - chr2L 4996146 intron Rtnl1 - chr2L 4996225 intron Rtnl1 - chr2L_18_4995001 chr2L_4995001 RAL-822 118 chr2L 5092377 5092440 chr2L 5092499 5092562 19 119 3.5 4.0 3.8 4.0 185 chr2L 5092377 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092562 intron pgant5 - chr2L_19_5090001 chr2L_5090001 RAL-822 119 chr2L 5117265 5117322 chr2L 5117382 5117397 17 100 3.5 2.0 2.8 4.5 132 chr2L 5117265 intron Msp300 + chr2L 5117331 intron Msp300 + chr2L 5117397 intron Msp300 + chr2L_17_5115001 chr2L_5115001 RAL-822 120 chr2L 5120960 5121005 chr2L 5121068 5121113 9 112 4.5 4.5 4.5 1.6 153 chr2L 5120960 intron Msp300 + chr2L 5121036 intron Msp300 + chr2L 5121113 intron Msp300 + chr2L_9_5120001 chr2L_5120001 RAL-822 121 chr2L 5210244 5210300 chr2L 5213568 5213580 7 3309 52.0 32.0 42.0 0.2 3336 chr2L 5210244 intergenic Cyp28d1 + chr2L 5211912 exon Cyp28d1 + chr2L 5213580 exon CG7742 - chr2L_7_5210001 chr2L_5210001 RAL-822 122 chr2L 5242936 5242937 chr2L 16217660 16217660 4 10974724 9.5 21.0 15.2 0.2 10974724 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_4_10730001 chr2L_10730001 RAL-822 123 chr2L 5276699 5276733 chr2L 5276803 5276852 9 111 1.5 1.5 1.5 3.6 153 chr2L 5276699 exon Bsg25D - chr2L 5276776 intron Bsg25D - chr2L 5276852 intron Bsg25D - chr2L_9_5275001 chr2L_5275001 RAL-822 124 chr2L 5342121 5342128 chr2L 5342216 5342225 4 100 10.0 1.5 5.8 0.6 104 chr2L 5342121 5` UTR CG12512 - chr2L 5342173 5` UTR CG12512 - chr2L 5342225 5` UTR CG12512 - chr2L_4_5340001 chr2L_5340001 RAL-822 125 chr2L 5342142 5342151 chr2L 5342210 5342218 4 84 6.0 1.5 3.8 0.8 76 chr2L 5342142 5` UTR CG12512 - chr2L 5342180 5` UTR CG12512 - chr2L 5342218 5` UTR CG12512 - chr2L_4_5340001 chr2L_5340001 RAL-822 126 chr2L 5342752 5342797 chr2L 5345158 5345202 Doc 11 2409 5.5 5.0 5.2 1.8 2450 chr2L 5342752 intergenic not near genes chr2L 5343977 intergenic not near genes chr2L 5345202 intergenic not near genes chr2L_11_5340001 chr2L_5340001 RAL-822 127 chr2L 5379538 5379589 chr2L 5379676 5379683 4 108 3.0 2.0 2.5 1.1 145 chr2L 5379538 3` UTR CR42850 - chr2L 5379610 3` UTR CR42850 - chr2L 5379683 3` UTR CR42850 - chr2L_4_5375001 chr2L_5375001 RAL-822 128 chr2L 5488024 5488036 chr2L 5488096 5488149 5 105 6.0 0.5 3.2 1.2 125 chr2L 5488024 intergenic not near genes chr2L 5488086 intergenic not near genes chr2L 5488149 intergenic not near genes chr2L_5_5485001 chr2L_5485001 RAL-822 129 chr2L 5492497 5492539 chr2L 5492628 5492639 5 121 0.0 4.5 2.2 1.6 142 chr2L 5492497 intergenic not near genes chr2L 5492568 intergenic not near genes chr2L 5492639 intergenic not near genes chr2L_5_5490001 chr2L_5490001 RAL-822 130 chr2L 5500032 5500065 chr2L 5500148 5500176 6 114 1.0 5.0 3.0 1.5 144 chr2L 5500032 intergenic not near genes chr2L 5500104 intergenic not near genes chr2L 5500176 intergenic not near genes chr2L_6_5500001 chr2L_5500001 RAL-822 131 chr2L 5508503 5508561 chr2L 5508615 5508667 13 103 2.0 3.5 2.8 3.4 164 chr2L 5508503 intergenic not near genes chr2L 5508585 intergenic not near genes chr2L 5508667 intergenic not near genes chr2L_13_5505001 chr2L_5505001 RAL-822 132 chr2L 5516623 5516682 chr2L 5516737 5516796 27 111 6.0 7.5 6.8 3.5 173 chr2L 5516623 intergenic not near genes chr2L 5516710 intergenic not near genes chr2L 5516796 intergenic not near genes chr2L_27_5515001 chr2L_5515001 RAL-822 133 chr2L 5573653 5573702 chr2L 5573764 5573809 19 108 5.5 7.0 6.2 2.6 156 chr2L 5573653 intergenic not near genes chr2L 5573731 intergenic not near genes chr2L 5573809 intergenic not near genes chr2L_19_5570001 chr2L_5570001 RAL-822 134 chr2L 5589772 5589834 chr2L 5589974 5590030 19 203 1.0 2.5 1.8 6.8 258 chr2L 5589772 intergenic not near genes chr2L 5589901 intergenic not near genes chr2L 5590030 intergenic not near genes chr2L_19_5585001 chr2L_5585001 RAL-822 135 chr2L 5672148 5672199 chr2L 5672264 5672310 16 113 2.5 5.5 4.0 3.2 162 chr2L 5672148 intergenic not near genes chr2L 5672229 intergenic not near genes chr2L 5672310 intergenic not near genes chr2L_16_5670001 chr2L_5670001 RAL-822 136 chr2L 5695829 5695887 chr2L 5695956 5696014 13 121 2.5 6.0 4.2 2.5 185 chr2L 5695829 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696014 intergenic not near genes chr2L_13_5695001 chr2L_5695001 RAL-822 137 chr2L 5806216 5806239 chr2L 5806354 5806377 8 133 8.0 6.5 7.2 1.0 161 chr2L 5806216 intron CG11034 + chr2L 5806296 intron CG11034 + chr2L 5806377 intron CG11034 + chr2L_8_5805001 chr2L_5805001 RAL-822 138 chr2L 5814673 5814714 chr2L 5814781 5814832 5 109 2.0 2.5 2.2 1.6 159 chr2L 5814673 intergenic not near genes chr2L 5814752 intergenic not near genes chr2L 5814832 intergenic not near genes chr2L_5_5810001 chr2L_5810001 RAL-822 139 chr2L 5825087 5825099 chr2L 5825190 5825228 5 121 4.5 4.0 4.2 1.0 141 chr2L 5825087 5` UTR TrissinR + chr2L 5825158 5` UTR TrissinR + chr2L 5825228 5` UTR TrissinR + chr2L_5_5825001 chr2L_5825001 RAL-822 140 chr2L 5827720 5827737 chr2L 5836718 5836720 roo 7 9009 4.5 2.0 3.2 1.7 9000 chr2L 5827720 intron TrissinR + chr2L 5832220 intron TrissinR + chr2L 5836720 intron TrissinR + chr2L_7_5830001 chr2L_5830001 RAL-822 141 chr2L 5866356 5866397 chr2L 5866486 5866522 6 127 4.0 0.0 2.0 2.0 166 chr2L 5866356 intron rau - chr2L 5866439 intron rau - chr2L 5866522 intron rau - chr2L_6_5865001 chr2L_5865001 RAL-822 142 chr2L 5989015 5989062 chr2L 5989108 5989165 12 106 5.0 0.0 2.5 3.4 150 chr2L 5989015 intergenic ifc +,lid - chr2L 5989090 intergenic ifc +,lid - chr2L 5989165 intergenic lid -,ifc + chr2L_12_5985001 chr2L_5985001 RAL-822 143 chr2L 5993308 5993355 chr2L 5993419 5993481 8 121 1.5 3.0 2.2 2.5 173 chr2L 5993308 exon lid - chr2L 5993394 intron lid - chr2L 5993481 exon lid - chr2L_8_5990001 chr2L_5990001 RAL-822 144 chr2L 6029257 6029285 chr2L 6029379 6029403 10 119 2.0 7.0 4.5 1.8 146 chr2L 6029257 intron CG9109 - chr2L 6029330 intron CG9109 - chr2L 6029403 intron CG9109 - chr2L_10_6025001 chr2L_6025001 RAL-822 145 chr2L 6037019 6037060 chr2L 6037114 6037155 13 101 4.0 1.5 2.8 3.4 136 chr2L 6037019 3` UTR CG9117 - chr2L 6037087 3` UTR CG9117 - chr2L 6037155 exon CG9117 - chr2L_13_6035001 chr2L_6035001 RAL-822 146 chr2L 6070913 6070922 chr2L 6070984 6071023 5 100 0.5 2.5 1.5 2.0 110 chr2L 6070913 intergenic Kr-h2 +,CG9154 - chr2L 6070968 intergenic Kr-h2 +,CG9154 - chr2L 6071023 5` UTR Kr-h2 + chr2L_5_6070001 chr2L_6070001 RAL-822 147 chr2L 6106196 6106235 chr2L 6106321 6106359 9 119 2.5 5.0 3.8 1.9 163 chr2L 6106196 intron stai + chr2L 6106278 intron stai + chr2L 6106359 intron stai + chr2L_9_6105001 chr2L_6105001 RAL-822 148 chr2L 6108760 6108821 chr2L 6108877 6108937 11 113 2.0 3.5 2.8 2.9 177 chr2L 6108760 intron stai + chr2L 6108848 intron stai + chr2L 6108937 intron stai + chr2L_11_6105001 chr2L_6105001 RAL-822 149 chr2L 6227691 6227727 chr2L 6227801 6227846 17 111 4.5 4.0 4.2 3.3 155 chr2L 6227691 intergenic not near genes chr2L 6227768 intergenic not near genes chr2L 6227846 intergenic not near genes chr2L_17_6225001 chr2L_6225001 RAL-822 150 chr2L 6242942 6242982 chr2L 6243075 6243115 11 128 7.0 2.0 4.5 2.0 173 chr2L 6242942 intergenic not near genes chr2L 6243028 intergenic not near genes chr2L 6243115 intergenic not near genes chr2L_11_6240001 chr2L_6240001 RAL-822 151 chr2L 6253594 6253600 chr2L 6253705 6253706 4 110 11.0 5.5 8.2 0.4 112 chr2L 6253594 intron Ddr + chr2L 6253650 intron Ddr + chr2L 6253706 intron Ddr + chr2L_4_6250001 chr2L_6250001 RAL-822 152 chr2L 6253619 6253630 chr2L 6253694 6253741 8 102 6.5 4.0 5.2 1.3 122 chr2L 6253619 intron Ddr + chr2L 6253680 intron Ddr + chr2L 6253741 intron Ddr + chr2L_8_6250001 chr2L_6250001 RAL-822 153 chr2L 6257488 6257504 chr2L 6257591 6257607 8 108 0.0 6.5 3.2 1.9 119 chr2L 6257488 intron Ddr + chr2L 6257548 intron Ddr + chr2L 6257607 intron Ddr + chr2L_8_6255001 chr2L_6255001 RAL-822 154 chr2L 6279606 6279647 chr2L 6279720 6279761 INE-1 15 108 9.0 0.0 4.5 2.7 155 chr2L 6279606 intron Ddr + chr2L 6279684 intron Ddr + chr2L 6279761 intron Ddr + chr2L_15_6275001 chr2L_6275001 RAL-822 155 chr2L 6349056 6349075 chr2L 6349157 6349179 6 106 7.0 7.0 7.0 0.8 123 chr2L 6349056 intergenic CG9498 - chr2L 6349118 intergenic CG9498 - chr2L 6349179 intergenic CG9498 - chr2L_6_6345001 chr2L_6345001 RAL-822 156 chr2L 6363160 6363170 chr2L 6366072 6366086 Burdock 6 2926 6.5 2.0 4.2 1.2 2926 chr2L 6363160 intergenic not near genes chr2L 6364623 intergenic not near genes chr2L 6366086 intergenic not near genes chr2L_6_6360001 chr2L_6360001 RAL-822 157 chr2L 6426835 6426882 chr2L 6445130 6445157 roo 12 18291 2.0 5.0 3.5 2.7 18322 chr2L 6426835 3` UTR CG9527 - chr2L 6435996 intron CG9527 - chr2L 6445157 exon CG9527 - chr2L_12_6435001 chr2L_6435001 RAL-822 158 chr2L 6537125 6537164 chr2L 6537232 6537277 14 108 4.0 2.5 3.2 3.3 152 chr2L 6537125 intron eya - chr2L 6537201 intron eya - chr2L 6537277 intron eya - chr2L_14_6535001 chr2L_6535001 RAL-822 159 chr2L 6564813 6564844 chr2L 6564941 6564972 9 126 8.5 1.0 4.8 1.6 159 chr2L 6564813 3` UTR CG13766 - chr2L 6564892 3` UTR CG13766 - chr2L 6564972 3` UTR CG13766 - chr2L_9_6560001 chr2L_6560001 RAL-822 160 chr2L 6590109 6590116 chr2L 6590171 6590229 4 84 1.0 4.0 2.5 1.1 120 chr2L 6590109 intron CG11319 - chr2L 6590169 intron CG11319 - chr2L 6590229 intron CG11319 - chr2L_4_6590001 chr2L_6590001 RAL-822 161 chr2L 6598106 6598149 chr2L 6599074 6599137 15 976 3.0 5.5 4.2 2.9 1031 chr2L 6598106 intron CG11319 - chr2L 6598622 intron CG11319 - chr2L 6599137 intron CG11319 - chr2L_15_6595001 chr2L_6595001 RAL-822 162 chr2L 6626855 6626919 chr2L 6626975 6627017 15 109 1.5 2.5 2.0 5.0 162 chr2L 6626855 intron Oatp26F - chr2L 6626936 intron Oatp26F - chr2L 6627017 intron Oatp26F - chr2L_15_6625001 chr2L_6625001 RAL-822 163 chr2L 6746087 6746118 chr2L 6746175 6746224 9 98 3.0 5.0 4.0 1.8 137 chr2L 6746087 intron CG11221 + chr2L 6746156 intron CG11221 + chr2L 6746224 intron CG11221 + chr2L_9_6745001 chr2L_6745001 RAL-822 164 chr2L 6772589 6772597 chr2L 6772667 6772703 5 88 4.0 4.5 4.2 1.0 114 chr2L 6772589 5` UTR CG11321 - chr2L 6772646 5` UTR CG11321 - chr2L 6772703 5` UTR CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-822 165 chr2L 6836480 6836532 chr2L 6836583 6836645 19 108 3.0 4.5 3.8 4.0 165 chr2L 6836480 intron sens-2 + chr2L 6836562 intron sens-2 + chr2L 6836645 intron sens-2 + chr2L_19_6835001 chr2L_6835001 RAL-822 166 chr2L 6887488 6887527 chr2L 6887651 6887699 5 174 2.0 0.0 1.0 2.5 211 chr2L 6887488 intron Nlg2 + chr2L 6887594 intron Nlg2 + chr2L 6887699 intron Nlg2 + chr2L_5_6885001 chr2L_6885001 RAL-822 167 chr2L 6891417 6891459 chr2L 6891546 6891585 8 126 3.0 1.0 2.0 2.7 168 chr2L 6891417 intron Nlg2 + chr2L 6891501 intron Nlg2 + chr2L 6891585 intron Nlg2 + chr2L_8_6890001 chr2L_6890001 RAL-822 168 chr2L 7030048 7030099 chr2L 7030164 7030172 13 100 2.0 5.0 3.5 2.9 124 chr2L 7030048 intergenic Rab30 - chr2L 7030110 intergenic Rab30 - chr2L 7030172 intergenic Rab30 - chr2L_13_7030001 chr2L_7030001 RAL-822 169 chr2L 7041240 7041253 chr2L 7041364 7041369 5 121 1.0 3.0 2.0 1.7 129 chr2L 7041240 intron milt + chr2L 7041304 intron milt + chr2L 7041369 intron milt + chr2L_5_7040001 chr2L_7040001 RAL-822 170 chr2L 7041255 7041287 chr2L 7041363 7041411 7 122 1.0 3.0 2.0 2.3 156 chr2L 7041255 intron milt + chr2L 7041333 intron milt + chr2L 7041411 intron milt + chr2L_7_7040001 chr2L_7040001 RAL-822 171 chr2L 7043501 7043532 chr2L 7043670 7043701 10 167 0.0 5.5 2.8 2.6 200 chr2L 7043501 intron milt + chr2L 7043601 intron milt + chr2L 7043701 intron milt + chr2L_10_7040001 chr2L_7040001 RAL-822 172 chr2L 7077334 7077345 chr2L 7077442 7077457 4 110 7.0 5.5 6.2 0.6 123 chr2L 7077334 intron Pvf2 - chr2L 7077396 intron Pvf2 - chr2L 7077457 intron Pvf2 - chr2L_4_7075001 chr2L_7075001 RAL-822 173 chr2L 7077348 7077387 chr2L 7077441 7077499 6 101 3.5 5.0 4.2 1.2 151 chr2L 7077348 intron Pvf2 - chr2L 7077424 intron Pvf2 - chr2L 7077499 intron Pvf2 - chr2L_6_7075001 chr2L_7075001 RAL-822 174 chr2L 7082877 7082885 chr2L 7082997 7083005 4 120 0.0 0.0 0.0 4.0 128 chr2L 7082877 intron Pvf2 - chr2L 7082941 intron Pvf2 - chr2L 7083005 intron Pvf2 - chr2L_4_7080001 chr2L_7080001 RAL-822 175 chr2L 7111741 7111788 chr2L 7111853 7111908 9 115 0.5 5.0 2.8 2.4 167 chr2L 7111741 intron Pvf3 - chr2L 7111824 intron Pvf3 - chr2L 7111908 intron Pvf3 - chr2L_9_7110001 chr2L_7110001 RAL-822 176 chr2L 7125768 7125784 chr2L 7125919 7125935 5 149 10.0 5.5 7.8 0.6 167 chr2L 7125768 intron Pvf3 - chr2L 7125852 intron Pvf3 - chr2L 7125935 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RAL-822 177 chr2L 7151807 7151829 chr2L 7152137 7152159 8 328 4.5 1.5 3.0 2.0 352 chr2L 7151807 intron Pvf3 - chr2L 7151983 intron Pvf3 - chr2L 7152159 intron Pvf3 - chr2L_8_7150001 chr2L_7150001 RAL-822 178 chr2L 7151830 7151851 chr2L 7152136 7152179 7 321 1.5 1.5 1.5 2.8 349 chr2L 7151830 intron Pvf3 - chr2L 7152004 intron Pvf3 - chr2L 7152179 intron Pvf3 - chr2L_7_7150001 chr2L_7150001 RAL-822 179 chr2L 7197993 7198022 chr2L 7198096 7198136 7 109 2.5 10.5 6.5 0.9 143 chr2L 7197993 intron CG4502 - chr2L 7198064 intron CG4502 - chr2L 7198136 intron CG4502 - chr2L_7_7195001 chr2L_7195001 RAL-822 180 chr2L 7254522 7254543 chr2L 7254626 7254650 8 110 0.0 7.5 3.8 1.7 128 chr2L 7254522 intergenic not near genes chr2L 7254586 intergenic not near genes chr2L 7254650 intergenic not near genes chr2L_8_7250001 chr2L_7250001 RAL-822 181 chr2L 7272025 7272071 chr2L 7272334 7272353 7 296 5.0 4.5 4.8 1.2 328 chr2L 7272025 intron Wnt4 - chr2L 7272189 intron Wnt4 - chr2L 7272353 intron Wnt4 - chr2L_7_7270001 chr2L_7270001 RAL-822 182 chr2L 7295971 7296023 chr2L 7296139 7296198 8 172 3.0 5.0 4.0 1.6 227 chr2L 7295971 intergenic not near genes chr2L 7296084 intergenic not near genes chr2L 7296198 intergenic not near genes chr2L_8_7295001 chr2L_7295001 RAL-822 183 chr2L 7330248 7330262 chr2L 7330362 7330376 4 113 7.5 3.5 5.5 0.6 128 chr2L 7330248 intergenic not near genes chr2L 7330312 intergenic not near genes chr2L 7330376 intergenic not near genes chr2L_4_7330001 chr2L_7330001 RAL-822 184 chr2L 7335172 7335231 chr2L 7335304 7335363 16 130 4.5 5.0 4.8 2.8 191 chr2L 7335172 intron Wnt6 + chr2L 7335268 intron Wnt6 + chr2L 7335363 intron Wnt6 + chr2L_16_7335001 chr2L_7335001 RAL-822 185 chr2L 7351034 7351077 chr2L 7351157 7351200 8 127 1.0 2.0 1.5 3.2 166 chr2L 7351034 intron Wnt6 + chr2L 7351117 intron Wnt6 + chr2L 7351200 exon Wnt6 + chr2L_8_7350001 chr2L_7350001 RAL-822 186 chr2L 7436187 7436219 chr2L 7436303 7436345 10 123 1.5 0.0 0.8 5.6 158 chr2L 7436187 intergenic not near genes chr2L 7436266 intergenic not near genes chr2L 7436345 intergenic not near genes chr2L_10_7435001 chr2L_7435001 RAL-822 187 chr2L 7487288 7487328 chr2L 7487370 7487421 12 82 6.5 5.0 5.8 1.8 133 chr2L 7487288 intron Ziz - chr2L 7487354 intron Ziz - chr2L 7487421 intron Ziz - chr2L_12_7485001 chr2L_7485001 RAL-822 188 chr2L 7489684 7489716 chr2L 7489808 7489840 13 122 12.0 4.5 8.2 1.4 156 chr2L 7489684 intron Ziz - chr2L 7489762 intron Ziz - chr2L 7489840 intron Ziz - chr2L_13_7485001 chr2L_7485001 RAL-822 189 chr2L 7502742 7502745 chr2L 7502815 7502841 4 90 4.0 8.0 6.0 0.6 99 chr2L 7502742 intron RapGAP1 - chr2L 7502792 intron RapGAP1 - chr2L 7502841 intron RapGAP1 - chr2L_4_7500001 chr2L_7500001 RAL-822 190 chr2L 7502746 7502761 chr2L 7502811 7502860 8 89 2.5 7.0 4.8 1.4 114 chr2L 7502746 intron RapGAP1 - chr2L 7502803 intron RapGAP1 - chr2L 7502860 intron RapGAP1 - chr2L_8_7500001 chr2L_7500001 RAL-822 191 chr2L 7555191 7555232 chr2L 7555299 7555344 9 97 0.5 4.0 2.2 2.8 153 chr2L 7555191 intron RapGAP1 - chr2L 7555268 intron RapGAP1 - chr2L 7555344 intron RapGAP1 - chr2L_9_7555001 chr2L_7555001 RAL-822 192 chr2L 7704129 7704184 chr2L 7704231 7704274 16 100 5.0 4.5 4.8 2.8 145 chr2L 7704129 intron Tep3 + chr2L 7704202 intron Tep3 + chr2L 7704274 intron Tep3 + chr2L_16_7700001 chr2L_7700001 RAL-822 193 chr2L 7864840 7864867 chr2L 7864941 7864948 6 97 2.5 2.0 2.2 1.9 108 chr2L 7864840 3` UTR Proc - chr2L 7864894 3` UTR Proc - chr2L 7864948 3` UTR Proc - chr2L_6_7860001 chr2L_7860001 RAL-822 194 chr2L 7867546 7867595 chr2L 7867664 7867724 18 122 2.5 5.5 4.0 3.6 178 chr2L 7867546 intron Proc - chr2L 7867635 intron Proc - chr2L 7867724 intron Proc - chr2L_18_7865001 chr2L_7865001 RAL-822 195 chr2L 7959010 7959055 chr2L 7960456 7960483 pogo 13 1438 8.0 5.5 6.8 1.7 1473 chr2L 7959010 intron Snoo - chr2L 7959746 intron Snoo - chr2L 7960483 intron Snoo - chr2L_13_7955001 chr2L_7955001 RAL-822 196 chr2L 7986893 7986918 chr2L 7987014 7987040 10 120 2.5 6.5 4.5 1.8 147 chr2L 7986893 3` UTR pes - chr2L 7986966 3` UTR pes - chr2L 7987040 3` UTR pes - chr2L_10_7985001 chr2L_7985001 RAL-822 197 chr2L 8013627 8013643 chr2L 8023585 8023614 copia 5 9968 5.0 5.0 5.0 0.8 9987 chr2L 8013627 intron Tg + chr2L 8018620 intron Tg + chr2L 8023614 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-822 198 chr2L 8044063 8044131 chr2L 8044176 8044220 14 101 1.0 4.0 2.5 4.0 157 chr2L 8044063 exon CG7466 + chr2L 8044142 intron CG7466 + chr2L 8044220 intron CG7466 + chr2L_14_8040001 chr2L_8040001 RAL-822 199 chr2L 8166045 8166063 chr2L 8166147 8166176 9 111 3.0 4.0 3.5 2.0 131 chr2L 8166045 intron Piezo + chr2L 8166110 intron Piezo + chr2L 8166176 intron Piezo + chr2L_9_8165001 chr2L_8165001 RAL-822 200 chr2L 8167121 8167173 chr2L 8167247 8167279 14 115 4.0 1.0 2.5 4.0 158 chr2L 8167121 intron Piezo + chr2L 8167200 intron Piezo + chr2L 8167279 intron Piezo + chr2L_14_8165001 chr2L_8165001 RAL-822 201 chr2L 8171274 8171280 chr2L 8171379 8171386 4 109 0.0 6.0 3.0 1.0 112 chr2L 8171274 intron Piezo + chr2L 8171330 intron Piezo + chr2L 8171386 intron Piezo + chr2L_4_8170001 chr2L_8170001 RAL-822 202 chr2L 8171281 8171291 chr2L 8171377 8171405 5 108 0.0 6.0 3.0 1.2 124 chr2L 8171281 intron Piezo + chr2L 8171343 intron Piezo + chr2L 8171405 intron Piezo + chr2L_5_8170001 chr2L_8170001 RAL-822 203 chr2L 8231903 8231961 chr2L 8232021 8232104 9 129 1.5 0.0 0.8 5.0 201 chr2L 8231903 intron Pvr - chr2L 8232004 intron Pvr - chr2L 8232104 intron Pvr - chr2L_9_8230001 chr2L_8230001 RAL-822 204 chr2L 8443624 8443839 chr2L 8443787 8443998 4 164 12.0 4.5 8.2 0.4 374 chr2L 8443624 exon CG31897 + chr2L 8443811 exon CG31897 + chr2L 8443998 exon CG31897 + chr2L_4_8440001 chr2L_8440001 RAL-822 205 chr2L 8452412 8452444 chr2L 8461598 8461632 roo 20 9198 5.5 7.5 6.5 2.7 9220 chr2L 8452412 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461632 intron fu12 - chr2L_20_8455001 chr2L_8455001 RAL-822 206 chr2L 8498169 8498237 chr2L 8498285 8498333 20 112 2.5 3.5 3.0 5.0 164 chr2L 8498169 intron Dh31 - chr2L 8498251 intron Dh31 - chr2L 8498333 intron Dh31 - chr2L_20_8495001 chr2L_8495001 RAL-822 207 chr2L 8554345 8554369 chr2L 8554471 8554500 10 129 3.5 3.0 3.2 2.4 155 chr2L 8554345 intron Sema-1a + chr2L 8554422 intron Sema-1a + chr2L 8554500 intron Sema-1a + chr2L_10_8550001 chr2L_8550001 RAL-822 208 chr2L 8605940 8605998 chr2L 8606051 8606112 12 100 4.5 1.0 2.8 3.2 172 chr2L 8605940 intron Sema-1a + chr2L 8606026 intron Sema-1a + chr2L 8606112 intron Sema-1a + chr2L_12_8605001 chr2L_8605001 RAL-822 209 chr2L 8612822 8612867 chr2L 8612934 8612978 13 104 5.5 7.5 6.5 1.7 156 chr2L 8612822 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612978 intron Sema-1a + chr2L_13_8610001 chr2L_8610001 RAL-822 210 chr2L 8723111 8723136 chr2L 8731492 8731547 Tirant 10 8404 2.5 2.5 2.5 2.9 8436 chr2L 8723111 intron raw - chr2L 8727329 intron raw - chr2L 8731547 intron raw - chr2L_10_8725001 chr2L_8725001 RAL-822 211 chr2L 8772778 8772801 chr2L 8772882 8772925 6 110 5.5 0.0 2.8 1.6 147 chr2L 8772778 intergenic CG9466 -,CG9465 - chr2L 8772852 intergenic CG9466 - chr2L 8772925 intergenic CG9466 - chr2L_6_8770001 chr2L_8770001 RAL-822 212 chr2L 8772802 8772811 chr2L 8772875 8772933 4 109 4.0 0.0 2.0 1.3 131 chr2L 8772802 intergenic CG9466 -,CG9465 - chr2L 8772868 intergenic CG9466 - chr2L 8772933 intergenic CG9466 - chr2L_4_8770001 chr2L_8770001 RAL-822 213 chr2L 8788757 8788779 chr2L 8788873 8788891 7 122 2.0 4.0 3.0 1.8 134 chr2L 8788757 intergenic not near genes chr2L 8788824 intergenic not near genes chr2L 8788891 intergenic not near genes chr2L_7_8785001 chr2L_8785001 RAL-822 214 chr2L 8799764 8799832 chr2L 8799915 8799963 20 137 3.0 5.5 4.2 3.8 199 chr2L 8799764 intergenic not near genes chr2L 8799864 intergenic not near genes chr2L 8799963 intergenic not near genes chr2L_20_8795001 chr2L_8795001 RAL-822 215 chr2L 8891841 8891904 chr2L 8891953 8892017 4 106 0.0 0.0 0.0 4.0 176 chr2L 8891841 exon CG42713 + chr2L 8891929 3` UTR CG42713 + chr2L 8892017 3` UTR CG42713 + chr2L_4_8890001 chr2L_8890001 RAL-822 216 chr2L 8956206 8956225 chr2L 8956317 8956327 8 109 4.0 1.0 2.5 2.3 121 chr2L 8956206 intron CG31886 - chr2L 8956266 intron CG31886 - chr2L 8956327 intron CG31886 - chr2L_8_8955001 chr2L_8955001 RAL-822 217 chr2L 9000275 9000300 chr2L 9007787 9007837 roo 5 7535 6.0 0.0 3.0 1.2 7562 chr2L 9000275 intergenic Try29F + chr2L 9004056 intergenic not near genes chr2L 9007837 intergenic not near genes chr2L_5_9000001 chr2L_9000001 RAL-822 218 chr2L 9084338 9084340 chr2L 16217660 16217660 6 7133321 10.5 21.0 15.8 0.4 7133322 chr2L 9084338 intron Toll-4 + chr2L 12650999 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_12650001 chr2L_12650001 RAL-822 219 chr2L 9158759 9158790 chr2L 9158891 9158905 8 124 11.5 0.0 5.8 1.2 146 chr2L 9158759 intron CG32982 + chr2L 9158832 intron CG32982 + chr2L 9158905 intron CG32982 + chr2L_8_9155001 chr2L_9155001 RAL-822 220 chr2L 9217972 9218003 chr2L 9222755 9222823 Doc 5 4815 5.0 0.0 2.5 1.4 4851 chr2L 9217972 intron tai + chr2L 9220398 intron tai + chr2L 9222823 intron tai + chr2L_5_9220001 chr2L_9220001 RAL-822 221 chr2L 9227207 9227248 chr2L 9227315 9227348 5 103 2.0 3.0 2.5 1.4 141 chr2L 9227207 intron tai + chr2L 9227278 intron tai + chr2L 9227348 intron tai + chr2L_5_9225001 chr2L_9225001 RAL-822 222 chr2L 9251113 9251176 chr2L 9251245 9251291 8 126 10.0 7.0 8.5 0.8 178 chr2L 9251113 intergenic aust -,borr - chr2L 9251202 intergenic aust -,borr - chr2L 9251291 intergenic borr -,aust - chr2L_8_9250001 chr2L_9250001 RAL-822 223 chr2L 9283169 9283180 chr2L 9283281 9283292 5 111 4.0 4.5 4.2 1.0 123 chr2L 9283169 intron Ggamma30A + chr2L 9283230 intron Ggamma30A + chr2L 9283292 intron Ggamma30A + chr2L_5_9280001 chr2L_9280001 RAL-822 224 chr2L 9297354 9297403 chr2L 9297456 9297515 18 107 4.5 4.0 4.2 3.5 161 chr2L 9297354 3` UTR Ggamma30A + chr2L 9297434 3` UTR Ggamma30A + chr2L 9297515 3` UTR Ggamma30A + chr2L_18_9295001 chr2L_9295001 RAL-822 225 chr2L 9304490 9304520 chr2L 9304583 9304625 6 102 2.5 3.0 2.8 1.6 135 chr2L 9304490 3` UTR CR42844 - chr2L 9304558 3` UTR CR42844 - chr2L 9304625 3` UTR CR42844 - chr2L_6_9300001 chr2L_9300001 RAL-822 226 chr2L 9334988 9335041 chr2L 9335096 9335154 6 100 4.5 3.5 4.0 1.2 166 chr2L 9334988 intron Eaat1 + chr2L 9335071 intron Eaat1 + chr2L 9335154 intron Eaat1 + chr2L_6_9335001 chr2L_9335001 RAL-822 227 chr2L 9361320 9361357 chr2L 9361406 9361424 4 78 0.5 3.5 2.0 1.3 104 chr2L 9361320 intergenic not near genes chr2L 9361372 intergenic not near genes chr2L 9361424 intergenic not near genes chr2L_4_9360001 chr2L_9360001 RAL-822 228 chr2L 9380271 9380321 chr2L 9380382 9380412 17 110 4.5 3.0 3.8 3.5 141 chr2L 9380271 intron Shawl - chr2L 9380342 intron Shawl - chr2L 9380412 intron Shawl - chr2L_17_9380001 chr2L_9380001 RAL-822 229 chr2L 9387214 9387278 chr2L 9387347 9387411 7 131 5.0 2.0 3.5 1.6 197 chr2L 9387214 intron Shawl - chr2L 9387312 intron Shawl - chr2L 9387411 intron,5` UTR Shawl -,Aldh + chr2L_7_9385001 chr2L_9385001 RAL-822 230 chr2L 9393502 9393525 chr2L 9396481 9396509 jockey 9 2990 3.0 8.0 5.5 1.4 3007 chr2L 9393502 intron Shawl - chr2L 9395006 intron Shawl - chr2L 9396509 intron Shawl - chr2L_9_9395001 chr2L_9395001 RAL-822 231 chr2L 9420991 9421026 chr2L 9421139 9421193 4 168 0.0 2.0 1.0 2.0 202 chr2L 9420991 intron Mco1 + chr2L 9421092 intron Mco1 + chr2L 9421193 intron Mco1 + chr2L_4_9420001 chr2L_9420001 RAL-822 232 chr2L 9439600 9439644 chr2L 9439698 9439752 11 107 3.5 2.0 2.8 2.9 152 chr2L 9439600 intron numb + chr2L 9439676 intron numb + chr2L 9439752 intron numb + chr2L_11_9435001 chr2L_9435001 RAL-822 233 chr2L 9439941 9439953 chr2L 9440050 9440075 8 119 1.0 8.0 4.5 1.5 134 chr2L 9439941 intron numb + chr2L 9440008 intron numb + chr2L 9440075 intron,exon numb +,CG33723 - chr2L_8_9440001 chr2L_9440001 RAL-822 234 chr2L 9454953 9455005 chr2L 9455080 9455133 9 133 3.0 1.0 2.0 3.0 180 chr2L 9454953 intron numb + chr2L 9455043 intron numb + chr2L 9455133 intron numb + chr2L_9_9455001 chr2L_9455001 RAL-822 235 chr2L 9457042 9457101 chr2L 9457148 9457193 10 104 4.0 4.5 4.2 1.9 151 chr2L 9457042 intron numb + chr2L 9457118 intron numb + chr2L 9457193 intron numb + chr2L_10_9455001 chr2L_9455001 RAL-822 236 chr2L 9474763 9474769 chr2L 9474892 9474898 4 128 3.0 6.0 4.5 0.7 135 chr2L 9474763 intergenic not near genes chr2L 9474830 intergenic not near genes chr2L 9474898 intergenic not near genes chr2L_4_9470001 chr2L_9470001 RAL-822 237 chr2L 9474774 9474802 chr2L 9474889 9474931 7 127 3.0 6.0 4.5 1.3 157 chr2L 9474774 intergenic not near genes chr2L 9474852 intergenic not near genes chr2L 9474931 intergenic not near genes chr2L_7_9470001 chr2L_9470001 RAL-822 238 chr2L 9506411 9506459 chr2L 9506580 9506642 6 177 6.0 1.5 3.8 1.2 231 chr2L 9506411 intron CG33298 + chr2L 9506526 intron CG33298 + chr2L 9506642 intron CG33298 + chr2L_6_9505001 chr2L_9505001 RAL-822 239 chr2L 9620765 9620837 chr2L 9620883 9620952 11 112 3.0 1.5 2.2 3.4 187 chr2L 9620765 intron GlcAT-S + chr2L 9620858 intron GlcAT-S + chr2L 9620952 intron GlcAT-S + chr2L_11_9620001 chr2L_9620001 RAL-822 240 chr2L 9730955 9731006 chr2L 9731058 9731118 17 109 6.0 1.0 3.5 3.8 163 chr2L 9730955 intron Nckx30C - chr2L 9731036 intron Nckx30C - chr2L 9731118 intron Nckx30C - chr2L_17_9730001 chr2L_9730001 RAL-822 241 chr2L 9828235 9828269 chr2L 9828349 9828359 4 92 3.5 6.5 5.0 0.7 124 chr2L 9828235 intron nAChRalpha6 - chr2L 9828297 intron nAChRalpha6 - chr2L 9828359 intron nAChRalpha6 - chr2L_4_9825001 chr2L_9825001 RAL-822 242 chr2L 9829546 9829597 chr2L 9829777 9829834 12 230 3.5 3.5 3.5 2.7 288 chr2L 9829546 intron nAChRalpha6 - chr2L 9829690 intron nAChRalpha6 - chr2L 9829834 intron nAChRalpha6 - chr2L_12_9825001 chr2L_9825001 RAL-822 243 chr2L 9892483 9892533 chr2L 9892594 9892641 11 107 3.0 4.5 3.8 2.3 158 chr2L 9892483 intron mtDNA-helicase - chr2L 9892562 intron mtDNA-helicase - chr2L 9892641 exon mtDNA-helicase - chr2L_11_9890001 chr2L_9890001 RAL-822 244 chr2L 9973715 9973755 chr2L 9980847 9980851 HMS-Beagle 9 7128 1.5 2.0 1.8 3.2 7136 chr2L 9973715 intergenic not near genes chr2L 9977283 intergenic not near genes chr2L 9980851 intergenic not near genes chr2L_9_9975001 chr2L_9975001 RAL-822 245 chr2L 9982006 9982231 chr2L 9982120 9982364 12 130 0.0 0.0 0.0 12.0 358 chr2L 9982006 intergenic not near genes chr2L 9982185 intergenic not near genes chr2L 9982364 intergenic not near genes chr2L_12_9980001 chr2L_9980001 RAL-822 246 chr2L 10032063 10032119 chr2L 10032181 10032233 13 114 6.0 6.0 6.0 1.9 170 chr2L 10032063 intergenic not near genes chr2L 10032148 intergenic not near genes chr2L 10032233 intergenic obst-B + chr2L_13_10030001 chr2L_10030001 RAL-822 247 chr2L 10051727 10051752 chr2L 10051819 10051864 4 103 2.0 6.5 4.2 0.8 137 chr2L 10051727 5` UTR CR44874 + chr2L 10051796 5` UTR CR44874 + chr2L 10051864 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-822 248 chr2L 10087451 10087486 chr2L 10087561 10087582 5 104 1.0 3.0 2.0 1.7 131 chr2L 10087451 intron CG44153 - chr2L 10087516 intron CG44153 - chr2L 10087582 intron CG44153 - chr2L_5_10085001 chr2L_10085001 RAL-822 249 chr2L 10153194 10153234 chr2L 10153293 10153337 7 94 2.0 2.0 2.0 2.3 143 chr2L 10153194 intron,exon CG44153 -,CG4839 + chr2L 10153266 intron,intron CG44153 -,CG4839 + chr2L 10153337 intron,exon CG44153 -,CG4839 + chr2L_7_10150001 chr2L_10150001 RAL-822 250 chr2L 10156303 10156353 chr2L 10163796 10163842 blood 9 7486 3.5 4.5 4.0 1.8 7539 chr2L 10156303 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163842 intron CG44153 - chr2L_9_10160001 chr2L_10160001 RAL-822 251 chr2L 10177384 10177390 chr2L 10177490 10177505 4 111 1.0 4.5 2.8 1.1 121 chr2L 10177384 intron CG44153 - chr2L 10177444 intron CG44153 - chr2L 10177505 intron CG44153 - chr2L_4_10175001 chr2L_10175001 RAL-822 252 chr2L 10179426 10179456 chr2L 10179513 10179521 4 92 2.5 8.5 5.5 0.6 95 chr2L 10179426 intron CG44153 - chr2L 10179474 intron CG44153 - chr2L 10179521 intron CG44153 - chr2L_4_10175001 chr2L_10175001 RAL-822 253 chr2L 10204474 10204482 chr2L 10204592 10204600 4 116 8.0 6.0 7.0 0.5 126 chr2L 10204474 intergenic CG34159 -,CG5734 - chr2L 10204537 intergenic CG5734 -,CG34159 - chr2L 10204600 intergenic CG5734 -,CG34159 - chr2L_4_10200001 chr2L_10200001 RAL-822 254 chr2L 10204483 10204527 chr2L 10204586 10204645 20 112 3.5 3.5 3.5 4.4 162 chr2L 10204483 intergenic CG34159 -,CG5734 - chr2L 10204564 intergenic CG5734 -,CG34159 - chr2L 10204645 intergenic CG5734 -,CG34159 - chr2L_20_10200001 chr2L_10200001 RAL-822 255 chr2L 10209817 10209836 chr2L 10209929 10209948 7 110 9.5 1.0 5.2 1.1 131 chr2L 10209817 intergenic CR44845 +,CG5727 -,CG5731 - chr2L 10209882 3` UTR CG5727 - chr2L 10209948 3` UTR CG5727 - chr2L_7_10205001 chr2L_10205001 RAL-822 256 chr2L 10232901 10232919 chr2L 10233014 10233016 7 109 10.0 8.0 9.0 0.7 115 chr2L 10232901 intron eEF1delta + chr2L 10232958 intron eEF1delta + chr2L 10233016 intron eEF1delta + chr2L_7_10230001 chr2L_10230001 RAL-822 257 chr2L 10232923 10232940 chr2L 10233012 10233053 10 104 4.0 8.0 6.0 1.4 130 chr2L 10232923 intron eEF1delta + chr2L 10232988 intron eEF1delta + chr2L 10233053 intron eEF1delta + chr2L_10_10230001 chr2L_10230001 RAL-822 258 chr2L 10294640 10294682 chr2L 10294761 10294803 8 113 8.0 3.0 5.5 1.2 163 chr2L 10294640 intron Hand - chr2L 10294722 intron Hand - chr2L 10294803 intron Hand - chr2L_8_10290001 chr2L_10290001 RAL-822 259 chr2L 10314469 10314535 chr2L 10314612 10314654 17 139 5.0 5.0 5.0 2.8 185 chr2L 10314469 intergenic CG5384 -,CG4972 + chr2L 10314562 intergenic CG5384 -,CG4972 + chr2L 10314654 intergenic CG4972 +,CG5384 - chr2L_17_10310001 chr2L_10310001 RAL-822 260 chr2L 10458194 10458215 chr2L 10458313 10458344 8 126 0.0 2.0 1.0 4.0 150 chr2L 10458194 intron LM408 + chr2L 10458269 intron LM408 + chr2L 10458344 intron LM408 + chr2L_8_10455001 chr2L_10455001 RAL-822 261 chr2L 10480276 10480330 chr2L 10480389 10480428 13 103 2.0 0.0 1.0 6.5 152 chr2L 10480276 intron RluA-2 + chr2L 10480352 intron RluA-2 + chr2L 10480428 intron RluA-2 + chr2L_13_10480001 chr2L_10480001 RAL-822 262 chr2L 10495291 10495307 chr2L 10495387 10495419 11 107 7.0 10.5 8.8 1.1 128 chr2L 10495291 intron Myo31DF - chr2L 10495355 intron Myo31DF - chr2L 10495419 intron Myo31DF - chr2L_11_10495001 chr2L_10495001 RAL-822 263 chr2L 10515337 10515344 chr2L 10515458 10515472 4 124 14.5 3.5 9.0 0.4 135 chr2L 10515337 intron,intron CG45083 -,Fatp - chr2L 10515404 intron,intron CG45083 -,Fatp - chr2L 10515472 intron,intron CG45083 -,Fatp - chr2L_4_10515001 chr2L_10515001 RAL-822 264 chr2L 10515345 10515390 chr2L 10515455 10515511 18 121 6.5 3.0 4.8 3.1 166 chr2L 10515345 intron,intron CG45083 -,Fatp - chr2L 10515428 intron,intron CG45083 -,Fatp - chr2L 10515511 intron,intron CG45083 -,Fatp - chr2L_18_10515001 chr2L_10515001 RAL-822 265 chr2L 10531591 10531628 chr2L 10531718 10531755 16 126 0.0 8.0 4.0 3.2 164 chr2L 10531591 3` UTR Lip4 + chr2L 10531673 3` UTR Lip4 + chr2L 10531755 3` UTR Lip4 + chr2L_16_10530001 chr2L_10530001 RAL-822 266 chr2L 10589035 10589072 chr2L 10589146 10589183 19 108 3.5 1.5 2.5 5.4 148 chr2L 10589035 intron Trim9 + chr2L 10589109 intron Trim9 + chr2L 10589183 intron Trim9 + chr2L_19_10585001 chr2L_10585001 RAL-822 267 chr2L 10592818 10592870 chr2L 10600503 10600562 opus 18 7691 1.5 4.5 3.0 4.5 7744 chr2L 10592818 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600562 intron Trim9 + chr2L_18_10595001 chr2L_10595001 RAL-822 268 chr2L 10688519 10688568 chr2L 10688630 10688653 12 105 2.5 5.5 4.0 2.4 134 chr2L 10688519 intergenic CG7294 - chr2L 10688586 intergenic CG7294 - chr2L 10688653 intergenic CG7294 - chr2L_12_10685001 chr2L_10685001 RAL-822 269 chr2L 10704882 10704945 chr2L 10705012 10705075 7 128 4.0 0.5 2.2 2.2 193 chr2L 10704882 intron,exon Lip2 -,CG6415 + chr2L 10704978 intron Lip2 - chr2L 10705075 exon Lip2 - chr2L_7_10700001 chr2L_10700001 RAL-822 270 chr2L 10721266 10721290 chr2L 10721373 10721398 4 104 6.5 3.5 5.0 0.7 132 chr2L 10721266 intergenic not near genes chr2L 10721332 intergenic not near genes chr2L 10721398 intergenic not near genes chr2L_4_10720001 chr2L_10720001 RAL-822 271 chr2L 10787956 10788029 chr2L 10788076 10788129 7 117 0.0 3.5 1.8 2.5 173 chr2L 10787956 intron CG31869 - chr2L 10788042 intron CG31869 - chr2L 10788129 intron CG31869 - chr2L_7_10785001 chr2L_10785001 RAL-822 272 chr2L 10803754 10803804 chr2L 10803875 10803925 12 119 2.0 3.5 2.8 3.2 171 chr2L 10803754 intergenic not near genes chr2L 10803840 intergenic Nos - chr2L 10803925 intergenic Nos - chr2L_12_10800001 chr2L_10800001 RAL-822 273 chr2L 10862833 10862870 chr2L 10864466 10864466 Rt1c 6 1614 5.5 3.5 4.5 1.1 1633 chr2L 10862833 3` UTR CR43807 - chr2L 10863650 intron CR43807 - chr2L 10864466 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-822 274 chr2L 10914861 10914901 chr2L 10914950 10915012 6 101 2.5 2.0 2.2 1.9 151 chr2L 10914861 intergenic not near genes chr2L 10914936 intergenic not near genes chr2L 10915012 intergenic not near genes chr2L_6_10910001 chr2L_10910001 RAL-822 275 chr2L 10919793 10919822 chr2L 10919892 10919939 8 111 4.5 2.5 3.5 1.8 146 chr2L 10919793 intron dpr2 - chr2L 10919866 intron dpr2 - chr2L 10919939 intron dpr2 - chr2L_8_10915001 chr2L_10915001 RAL-822 276 chr2L 10944427 10944470 chr2L 10944541 10944588 13 115 0.0 3.5 1.8 4.6 161 chr2L 10944427 intron dpr2 - chr2L 10944508 intron dpr2 - chr2L 10944588 intron dpr2 - chr2L_13_10940001 chr2L_10940001 RAL-822 277 chr2L 11130474 11130526 chr2L 11130587 11130625 17 118 0.5 2.0 1.2 7.7 151 chr2L 11130474 5` UTR RfC38 - chr2L 11130550 5` UTR RfC38 - chr2L 11130625 5` UTR RfC38 - chr2L_17_11130001 chr2L_11130001 RAL-822 278 chr2L 11183752 11183807 chr2L 11183883 11183928 24 127 4.0 4.5 4.2 4.6 176 chr2L 11183752 intron Ca-beta - chr2L 11183840 intron Ca-beta - chr2L 11183928 intron Ca-beta - chr2L_24_11180001 chr2L_11180001 RAL-822 279 chr2L 11193557 11193586 chr2L 11193655 11193715 4 114 0.0 5.0 2.5 1.1 158 chr2L 11193557 intron Ca-beta - chr2L 11193636 intron Ca-beta - chr2L 11193715 intron Ca-beta - chr2L_4_11190001 chr2L_11190001 RAL-822 280 chr2L 11246731 11246795 chr2L 11246863 11246922 13 126 2.0 1.0 1.5 5.2 191 chr2L 11246731 intron ab + chr2L 11246826 intron ab + chr2L 11246922 intron ab + chr2L_13_11245001 chr2L_11245001 RAL-822 281 chr2L 11306904 11306940 chr2L 11307027 11307049 6 118 0.0 4.5 2.2 1.9 145 chr2L 11306904 intergenic not near genes chr2L 11306976 intergenic not near genes chr2L 11307049 intergenic not near genes chr2L_6_11305001 chr2L_11305001 RAL-822 282 chr2L 11380601 11380638 chr2L 11380713 11380740 4 107 1.0 3.5 2.2 1.2 139 chr2L 11380601 intergenic not near genes chr2L 11380670 intergenic not near genes chr2L 11380740 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-822 283 chr2L 11395038 11395050 chr2L 11395133 11395156 5 107 3.0 7.0 5.0 0.8 118 chr2L 11395038 intergenic not near genes chr2L 11395097 intergenic not near genes chr2L 11395156 intergenic not near genes chr2L_5_11395001 chr2L_11395001 RAL-822 284 chr2L 11404765 11404803 chr2L 11404858 11404903 12 100 2.5 2.0 2.2 3.8 138 chr2L 11404765 intergenic not near genes chr2L 11404834 intergenic not near genes chr2L 11404903 intergenic not near genes chr2L_12_11400001 chr2L_11400001 RAL-822 285 chr2L 11418629 11418682 chr2L 11418743 11418775 8 106 2.5 2.0 2.2 2.5 146 chr2L 11418629 intergenic not near genes chr2L 11418702 intergenic not near genes chr2L 11418775 intergenic not near genes chr2L_8_11415001 chr2L_11415001 RAL-822 286 chr2L 11455552 11455588 chr2L 11455650 11455669 7 92 1.5 3.5 2.5 2.0 117 chr2L 11455552 intergenic not near genes chr2L 11455610 intergenic not near genes chr2L 11455669 intergenic not near genes chr2L_7_11455001 chr2L_11455001 RAL-822 287 chr2L 11540553 11540613 chr2L 11547993 11548007 Tabor 8 7431 4.5 7.0 5.8 1.2 7454 chr2L 11540553 intergenic not near genes chr2L 11544280 intergenic not near genes chr2L 11548007 intergenic not near genes chr2L_8_11540001 chr2L_11540001 RAL-822 288 chr2L 11555384 11555426 chr2L 11555529 11555568 8 150 5.0 0.0 2.5 2.3 184 chr2L 11555384 intergenic not near genes chr2L 11555476 intergenic not near genes chr2L 11555568 intergenic not near genes chr2L_8_11555001 chr2L_11555001 RAL-822 289 chr2L 11563618 11563667 chr2L 11568842 11568885 copia 8 5223 3.0 6.0 4.5 1.5 5267 chr2L 11563618 intergenic not near genes chr2L 11566252 intergenic not near genes chr2L 11568885 intergenic not near genes chr2L_8_11565001 chr2L_11565001 RAL-822 290 chr2L 11571728 11571773 chr2L 11572130 11572164 5 397 4.0 2.5 3.2 1.2 436 chr2L 11571728 intergenic not near genes chr2L 11571946 intergenic not near genes chr2L 11572164 intergenic not near genes chr2L_5_11570001 chr2L_11570001 RAL-822 291 chr2L 11649028 11649040 chr2L 11649119 11649166 9 111 3.5 1.0 2.2 2.8 138 chr2L 11649028 intergenic CG6614 - chr2L 11649097 intergenic CG6614 - chr2L 11649166 intergenic CG6614 - chr2L_9_11645001 chr2L_11645001 RAL-822 292 chr2L 11661358 11661376 chr2L 11661695 11661706 7 342 4.0 6.5 5.2 1.1 348 chr2L 11661358 intergenic CR44479 -,CR44497 - chr2L 11661532 intergenic CR44479 -,CR44480 + chr2L 11661706 3` UTR CR44479 - chr2L_7_11660001 chr2L_11660001 RAL-822 293 chr2L 11672108 11672167 chr2L 11672244 11672309 17 137 3.0 0.5 1.8 6.1 201 chr2L 11672108 intergenic not near genes chr2L 11672208 intergenic not near genes chr2L 11672309 intergenic not near genes chr2L_17_11670001 chr2L_11670001 RAL-822 294 chr2L 11710128 11710140 chr2L 11710238 11710245 5 110 5.0 0.0 2.5 1.4 117 chr2L 11710128 intergenic not near genes chr2L 11710186 intergenic not near genes chr2L 11710245 intergenic not near genes chr2L_5_11710001 chr2L_11710001 RAL-822 295 chr2L 11713487 11713537 chr2L 11720975 11721029 blood 9 7491 2.0 3.5 2.8 2.4 7542 chr2L 11713487 intergenic not near genes chr2L 11717258 intergenic not near genes chr2L 11721029 intergenic CR44143 + chr2L_9_11715001 chr2L_11715001 RAL-822 296 chr2L 11750299 11750341 chr2L 11750619 11750652 7 318 1.5 6.5 4.0 1.4 353 chr2L 11750299 intergenic not near genes chr2L 11750476 intergenic not near genes chr2L 11750652 intergenic not near genes chr2L_7_11750001 chr2L_11750001 RAL-822 297 chr2L 11770579 11770632 chr2L 11770688 11770715 12 106 1.5 3.5 2.5 3.4 136 chr2L 11770579 intergenic not near genes chr2L 11770647 intergenic not near genes chr2L 11770715 intergenic not near genes chr2L_12_11770001 chr2L_11770001 RAL-822 298 chr2L 11841354 11841391 chr2L 11841449 11841504 7 109 3.5 5.5 4.5 1.3 150 chr2L 11841354 intron Pde1c - chr2L 11841429 intron Pde1c - chr2L 11841504 intron Pde1c - chr2L_7_11840001 chr2L_11840001 RAL-822 299 chr2L 11862346 11862380 chr2L 11862456 11862508 9 123 6.0 4.5 5.2 1.5 162 chr2L 11862346 intron Pde1c - chr2L 11862427 intron Pde1c - chr2L 11862508 intron Pde1c - chr2L_9_11860001 chr2L_11860001 RAL-822 300 chr2L 11951936 11951992 chr2L 11952059 11952115 13 120 2.5 2.0 2.2 4.1 179 chr2L 11951936 intergenic CR43314 - chr2L 11952026 intergenic CR43314 - chr2L 11952115 intergenic CR43314 - chr2L_13_11950001 chr2L_11950001 RAL-822 301 chr2L 12058159 12058208 chr2L 12058277 12058326 14 116 2.0 5.5 3.8 2.9 167 chr2L 12058159 exon,3` UTR CG34164 +,RpL7-like + chr2L 12058242 3` UTR,3` UTR CG34164 +,RpL7-like + chr2L 12058326 3` UTR Rab3-GAP - chr2L_14_12055001 chr2L_12055001 RAL-822 302 chr2L 12067298 12067354 chr2L 12074385 12074440 297 10 7085 7.0 6.5 6.8 1.3 7142 chr2L 12067298 intergenic not near genes chr2L 12070869 intergenic not near genes chr2L 12074440 intergenic not near genes chr2L_10_12070001 chr2L_12070001 RAL-822 303 chr2L 12135878 12135895 chr2L 12135987 12136033 4 118 1.0 4.0 2.5 1.1 155 chr2L 12135878 intergenic not near genes chr2L 12135956 intergenic not near genes chr2L 12136033 intergenic not near genes chr2L_4_12135001 chr2L_12135001 RAL-822 304 chr2L 12232616 12232630 chr2L 12232724 12232747 6 116 0.5 5.0 2.8 1.6 131 chr2L 12232616 intron aret + chr2L 12232682 intron aret + chr2L 12232747 intron aret + chr2L_6_12230001 chr2L_12230001 RAL-822 305 chr2L 12265948 12265986 chr2L 12266044 12266091 12 108 1.5 2.5 2.0 4.0 143 chr2L 12265948 intron aret + chr2L 12266020 intron aret + chr2L 12266091 intron aret + chr2L_12_12265001 chr2L_12265001 RAL-822 306 chr2L 12272134 12272196 chr2L 12272242 12272276 11 103 2.5 5.0 3.8 2.3 142 chr2L 12272134 intron aret + chr2L 12272205 intron aret + chr2L 12272276 intron aret + chr2L_11_12270001 chr2L_12270001 RAL-822 307 chr2L 12278897 12278935 chr2L 12279012 12279035 12 110 5.0 6.5 5.8 1.8 138 chr2L 12278897 exon aret + chr2L 12278966 intron aret + chr2L 12279035 intron aret + chr2L_12_12275001 chr2L_12275001 RAL-822 308 chr2L 12294215 12294280 chr2L 12294332 12294392 11 114 2.0 4.5 3.2 2.6 177 chr2L 12294215 intron aret + chr2L 12294304 intron aret + chr2L 12294392 intron aret + chr2L_11_12290001 chr2L_12290001 RAL-822 309 chr2L 12305390 12305433 chr2L 12305497 12305534 6 112 4.0 3.0 3.5 1.3 144 chr2L 12305390 intron aret + chr2L 12305462 intron aret + chr2L 12305534 intron aret + chr2L_6_12305001 chr2L_12305001 RAL-822 310 chr2L 12318682 12318734 chr2L 12319042 12319077 8 337 4.0 4.0 4.0 1.6 395 chr2L 12318682 intergenic not near genes chr2L 12318880 intergenic not near genes chr2L 12319077 intergenic not near genes chr2L_8_12315001 chr2L_12315001 RAL-822 311 chr2L 12366828 12366872 chr2L 12366949 12366993 13 117 9.0 6.0 7.5 1.5 165 chr2L 12366828 intron bru-2 + chr2L 12366910 intron bru-2 + chr2L 12366993 intron bru-2 + chr2L_13_12365001 chr2L_12365001 RAL-822 312 chr2L 12377320 12377406 chr2L 12377442 12377480 26 110 3.5 4.0 3.8 5.4 160 chr2L 12377320 intron bru-2 + chr2L 12377400 intron bru-2 + chr2L 12377480 intron bru-2 + chr2L_26_12375001 chr2L_12375001 RAL-822 313 chr2L 12410977 12411038 chr2L 12411091 12411138 13 107 3.5 7.5 5.5 2.0 161 chr2L 12410977 intron vir-1 - chr2L 12411058 intron vir-1 - chr2L 12411138 intron vir-1 - chr2L_13_12410001 chr2L_12410001 RAL-822 314 chr2L 12466198 12466236 chr2L 12466319 12466357 10 119 0.0 1.5 0.8 5.6 159 chr2L 12466198 intron bun - chr2L 12466278 intron bun - chr2L 12466357 intron bun - chr2L_10_12465001 chr2L_12465001 RAL-822 315 chr2L 12471099 12471138 chr2L 12471210 12471249 5 106 4.0 6.5 5.2 0.8 150 chr2L 12471099 intron bun - chr2L 12471174 intron bun - chr2L 12471249 intron bun - chr2L_5_12470001 chr2L_12470001 RAL-822 316 chr2L 12487884 12487919 chr2L 12487979 12488004 7 96 4.0 6.5 5.2 1.1 120 chr2L 12487884 intron bun - chr2L 12487944 intron bun - chr2L 12488004 intron bun - chr2L_7_12485001 chr2L_12485001 RAL-822 317 chr2L 12529204 12529418 chr2L 12529384 12529528 13 173 7.0 3.5 5.2 2.1 324 chr2L 12529204 intron bun - chr2L 12529366 intron bun - chr2L 12529528 intron bun - chr2L_13_12525001 chr2L_12525001 RAL-822 318 chr2L 12532146 12532176 chr2L 12532252 12532272 11 108 4.0 4.0 4.0 2.2 126 chr2L 12532146 intron bun - chr2L 12532209 intron bun - chr2L 12532272 intron bun - chr2L_11_12530001 chr2L_12530001 RAL-822 319 chr2L 12558293 12558352 chr2L 12565447 12565508 HMS-Beagle 14 7150 0.0 2.0 1.0 7.0 7215 chr2L 12558293 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565508 intergenic not near genes chr2L_14_12560001 chr2L_12560001 RAL-822 320 chr2L 12583472 12583479 chr2L 12583599 12583606 5 126 6.0 1.0 3.5 1.1 134 chr2L 12583472 5` UTR CR44595 + chr2L 12583539 5` UTR CR44595 + chr2L 12583606 intergenic CR44595 + chr2L_5_12580001 chr2L_12580001 RAL-822 321 chr2L 12583488 12583496 chr2L 12583594 12583616 5 121 4.5 1.0 2.8 1.3 128 chr2L 12583488 5` UTR CR44595 + chr2L 12583552 intergenic CR44595 + chr2L 12583616 intergenic CR44595 + chr2L_5_12580001 chr2L_12580001 RAL-822 322 chr2L 12598178 12598195 chr2L 12598289 12598307 4 112 4.0 8.0 6.0 0.6 129 chr2L 12598178 intron nub + chr2L 12598242 intron nub + chr2L 12598307 intron nub + chr2L_4_12595001 chr2L_12595001 RAL-822 323 chr2L 12609469 12609476 chr2L 12609620 12609627 4 151 2.5 2.0 2.2 1.2 158 chr2L 12609469 intron nub + chr2L 12609548 intron nub + chr2L 12609627 intron nub + chr2L_4_12605001 chr2L_12605001 RAL-822 324 chr2L 12653758 12653799 chr2L 12653910 12653940 10 147 6.0 2.0 4.0 2.0 182 chr2L 12653758 intergenic not near genes chr2L 12653849 intergenic not near genes chr2L 12653940 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-822 325 chr2L 12684185 12684249 chr2L 12684300 12684365 16 111 6.0 5.0 5.5 2.5 180 chr2L 12684185 intron pdm2 + chr2L 12684275 intron pdm2 + chr2L 12684365 intron pdm2 + chr2L_16_12680001 chr2L_12680001 RAL-822 326 chr2L 12731043 12731080 chr2L 12735844 12735882 F-element 16 4800 4.5 6.0 5.2 2.6 4839 chr2L 12731043 intron MRP + chr2L 12733462 intron MRP + chr2L 12735882 intron MRP + chr2L_16_12730001 chr2L_12730001 RAL-822 327 chr2L 12739155 12739196 chr2L 12743961 12744000 Doc 11 4806 1.5 4.0 2.8 2.9 4845 chr2L 12739155 exon MRP + chr2L 12741578 intron MRP + chr2L 12744000 exon MRP + chr2L_11_12740001 chr2L_12740001 RAL-822 328 chr2L 12751290 12751340 chr2L 12751398 12751426 9 108 1.5 4.5 3.0 2.2 136 chr2L 12751290 intergenic not near genes chr2L 12751358 intergenic not near genes chr2L 12751426 intergenic not near genes chr2L_9_12750001 chr2L_12750001 RAL-822 329 chr2L 12759182 12759236 chr2L 12759306 12759351 10 114 7.0 7.5 7.2 1.2 169 chr2L 12759182 intergenic not near genes chr2L 12759266 intergenic not near genes chr2L 12759351 intergenic not near genes chr2L_10_12755001 chr2L_12755001 RAL-822 330 chr2L 12763811 12763873 chr2L 12764041 12764120 BS 8 233 0.0 0.0 0.0 8.0 309 chr2L 12763811 intergenic not near genes chr2L 12763966 intergenic not near genes chr2L 12764120 intergenic not near genes chr2L_8_12760001 chr2L_12760001 RAL-822 331 chr2L 12781782 12781799 chr2L 12789255 12789284 Quasimodo 4 7482 8.0 5.5 6.8 0.5 7502 chr2L 12781782 intergenic not near genes chr2L 12785533 intergenic not near genes chr2L 12789284 intergenic not near genes chr2L_4_12785001 chr2L_12785001 RAL-822 332 chr2L 12781801 12781813 chr2L 12789248 12789278 Quasimodo 4 7461 6.0 5.0 5.5 0.6 7477 chr2L 12781801 intergenic not near genes chr2L 12785540 intergenic not near genes chr2L 12789278 intergenic not near genes chr2L_4_12785001 chr2L_12785001 RAL-822 333 chr2L 12791570 12791593 chr2L 12795280 12795303 F-element 7 3707 5.5 8.0 6.8 0.9 3733 chr2L 12791570 intergenic not near genes chr2L 12793436 intergenic not near genes chr2L 12795303 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-822 334 chr2L 12791594 12791619 chr2L 12795278 12795325 F-element 7 3701 4.0 7.5 5.8 1.0 3731 chr2L 12791594 intergenic not near genes chr2L 12793460 intergenic not near genes chr2L 12795325 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-822 335 chr2L 12791621 12791629 chr2L 12795276 12795339 F-element 12 3694 2.0 7.5 4.8 2.1 3718 chr2L 12791621 intergenic not near genes chr2L 12793480 intergenic not near genes chr2L 12795339 intergenic not near genes chr2L_12_12790001 chr2L_12790001 RAL-822 336 chr2L 12894029 12894045 chr2L 12895486 12895495 hobo 4 1455 8.0 2.0 5.0 0.7 1466 chr2L 12894029 intergenic not near genes chr2L 12894762 intergenic not near genes chr2L 12895495 intergenic not near genes chr2L_4_12890001 chr2L_12890001 RAL-822 337 chr2L 12933835 12933877 chr2L 12941320 12941364 blood 8 7489 4.0 3.5 3.8 1.7 7529 chr2L 12933835 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941364 intergenic not near genes chr2L_8_12935001 chr2L_12935001 RAL-822 338 chr2L 12989065 12989071 chr2L 12989134 12989178 4 85 2.0 2.0 2.0 1.3 113 chr2L 12989065 intergenic not near genes chr2L 12989122 intergenic not near genes chr2L 12989178 intergenic not near genes chr2L_4_12985001 chr2L_12985001 RAL-822 339 chr2L 12990510 12990532 chr2L 12990612 12990628 8 108 4.0 9.5 6.8 1.0 118 chr2L 12990510 intergenic not near genes chr2L 12990569 intergenic not near genes chr2L 12990628 intergenic not near genes chr2L_8_12990001 chr2L_12990001 RAL-822 340 chr2L 13036214 13036270 chr2L 13036486 13036535 X-element 19 274 5.0 6.5 5.8 2.8 321 chr2L 13036214 intron CG9932 - chr2L 13036374 intron CG9932 - chr2L 13036535 intron CG9932 - chr2L_19_13035001 chr2L_13035001 RAL-822 341 chr2L 13077084 13077148 chr2L 13077242 13077296 9 151 4.5 4.5 4.5 1.6 212 chr2L 13077084 intergenic not near genes chr2L 13077190 intergenic not near genes chr2L 13077296 intergenic not near genes chr2L_9_13075001 chr2L_13075001 RAL-822 342 chr2L 13147915 13147949 chr2L 13148030 13148044 4 108 17.5 23.0 20.2 0.2 129 chr2L 13147915 intergenic not near genes chr2L 13147980 intergenic not near genes chr2L 13148044 intergenic not near genes chr2L_4_13145001 chr2L_13145001 RAL-822 343 chr2L 13245003 13245063 chr2L 13245367 13245418 12 360 5.0 7.0 6.0 1.7 415 chr2L 13245003 intergenic snRNA:U5:34A +,CR45330 + chr2L 13245210 intergenic snRNA:U5:34A +,CR45330 + chr2L 13245418 intergenic snRNA:U5:34A + chr2L_12_13245001 chr2L_13245001 RAL-822 344 chr2L 13292804 13292849 chr2L 13292924 13292933 4 105 6.0 12.5 9.2 0.4 129 chr2L 13292804 intron CG31729 + chr2L 13292868 intron CG31729 + chr2L 13292933 intron CG31729 + chr2L_4_13290001 chr2L_13290001 RAL-822 345 chr2L 13362836 13362858 chr2L 13363058 13363093 5 229 5.0 7.0 6.0 0.7 257 chr2L 13362836 intergenic Nnp-1 - chr2L 13362964 intergenic Nnp-1 - chr2L 13363093 intergenic Nnp-1 - chr2L_5_13360001 chr2L_13360001 RAL-822 346 chr2L 13405636 13405665 chr2L 13410456 13410496 Doc 5 4829 1.0 7.0 4.0 1.0 4860 chr2L 13405636 exon CG7110 + chr2L 13408066 intron CG7110 + chr2L 13410496 intron CG7110 + chr2L_5_13405001 chr2L_13405001 RAL-822 347 chr2L 13422422 13422497 chr2L 13422558 13422611 11 116 0.0 5.5 2.8 2.9 189 chr2L 13422422 intron CG42784 + chr2L 13422516 intron CG42784 + chr2L 13422611 intron CG42784 + chr2L_11_13420001 chr2L_13420001 RAL-822 348 chr2L 13449456 13449491 chr2L 13456922 13456962 Quasimodo 8 7466 2.5 9.5 6.0 1.1 7506 chr2L 13449456 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453209 intron CG42784 + chr2L 13456962 intron CG42784 + chr2L_8_13450001 chr2L_13450001 RAL-822 349 chr2L 13462018 13462036 chr2L 13462162 13462174 5 151 3.0 6.5 4.8 0.9 156 chr2L 13462018 intron CG42784 + chr2L 13462096 intron CG42784 + chr2L 13462174 intron CG42784 + chr2L_5_13460001 chr2L_13460001 RAL-822 350 chr2L 13481443 13481466 chr2L 13482065 13482108 jockey 8 631 4.5 3.5 4.0 1.6 665 chr2L 13481443 intron CG42784 + chr2L 13481776 intron CG42784 + chr2L 13482108 intron CG42784 + chr2L_8_13480001 chr2L_13480001 RAL-822 351 chr2L 13522260 13522270 chr2L 13527591 13527611 Transpac 4 5336 1.5 3.0 2.2 1.2 5351 chr2L 13522260 intron B4 - chr2L 13524936 intron B4 - chr2L 13527611 intron B4 - chr2L_4_13520001 chr2L_13520001 RAL-822 352 chr2L 13560382 13560415 chr2L 13565230 13565265 F-element 10 4852 10.0 5.5 7.8 1.1 4883 chr2L 13560382 intron kuz + chr2L 13562824 intron kuz + chr2L 13565265 intron kuz + chr2L_10_13560001 chr2L_13560001 RAL-822 353 chr2L 13725713 13725771 chr2L 13725836 13725855 9 108 1.0 1.0 1.0 4.5 142 chr2L 13725713 intergenic not near genes chr2L 13725784 intergenic not near genes chr2L 13725855 intergenic not near genes chr2L_9_13725001 chr2L_13725001 RAL-822 354 chr2L 13749186 13749199 chr2L 13749299 13749317 5 117 0.0 0.0 0.0 5.0 131 chr2L 13749186 intron,intron CR44846 +,TM9SF4 + chr2L 13749252 intron,intron CR44846 +,TM9SF4 + chr2L 13749317 intron,intron CR44846 +,TM9SF4 + chr2L_5_13745001 chr2L_13745001 RAL-822 355 chr2L 13749201 13749210 chr2L 13749295 13749323 6 110 0.0 0.0 0.0 6.0 122 chr2L 13749201 intron,intron CR44846 +,TM9SF4 + chr2L 13749262 intron,intron CR44846 +,TM9SF4 + chr2L 13749323 intron,intron CR44846 +,TM9SF4 + chr2L_6_13745001 chr2L_13745001 RAL-822 356 chr2L 13752798 13752828 chr2L 13752936 13752953 7 132 2.5 5.5 4.0 1.4 155 chr2L 13752798 intron,intron CR44846 +,TM9SF4 + chr2L 13752876 intron,intron CR44846 +,TM9SF4 + chr2L 13752953 intron,intron CR44846 +,TM9SF4 + chr2L_7_13750001 chr2L_13750001 RAL-822 357 chr2L 13761809 13761833 chr2L 13762908 13762941 Doc 5 1110 5.5 1.5 3.5 1.1 1132 chr2L 13761809 intron TM9SF4 + chr2L 13762375 intron TM9SF4 + chr2L 13762941 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-822 358 chr2L 13853064 13853107 chr2L 13862249 13862277 roo 12 9178 7.5 3.0 5.2 1.9 9213 chr2L 13853064 intron CenG1A + chr2L 13857670 intron CenG1A + chr2L 13862277 intron CenG1A + chr2L_12_13855001 chr2L_13855001 RAL-822 359 chr2L 13988249 13988301 chr2L 13988371 13988422 16 120 7.0 8.0 7.5 1.9 173 chr2L 13988249 intron rk - chr2L 13988336 intron rk - chr2L 13988422 intron rk - chr2L_16_13985001 chr2L_13985001 RAL-822 360 chr2L 14056797 14056837 chr2L 14056895 14056921 7 104 11.0 11.0 11.0 0.6 124 chr2L 14056797 intron nAChRalpha5 + chr2L 14056859 intron nAChRalpha5 + chr2L 14056921 intron nAChRalpha5 + chr2L_7_14055001 chr2L_14055001 RAL-822 361 chr2L 14160687 14160716 chr2L 14160787 14160822 4 110 25.0 32.0 28.5 0.1 135 chr2L 14160687 intergenic CG17341 +,CG43332 - chr2L 14160754 intergenic CG17341 +,CG43332 - chr2L 14160822 intergenic CG17341 +,CG43332 - chr2L_4_14160001 chr2L_14160001 RAL-822 362 chr2L 14246259 14246315 chr2L 14246370 14246437 5 115 1.5 2.5 2.0 1.7 178 chr2L 14246259 intergenic not near genes chr2L 14246348 intergenic not near genes chr2L 14246437 intergenic not near genes chr2L_5_14245001 chr2L_14245001 RAL-822 363 chr2L 14423834 14423893 chr2L 14423951 14424015 20 116 2.5 2.0 2.2 6.2 181 chr2L 14423834 intergenic Cpr35B - chr2L 14423924 intergenic Cpr35B - chr2L 14424015 intergenic Cpr35B - chr2L_20_14420001 chr2L_14420001 RAL-822 364 chr2L 14427487 14427528 chr2L 14427626 14427664 7 137 0.0 6.5 3.2 1.7 177 chr2L 14427487 intergenic not near genes chr2L 14427576 intergenic not near genes chr2L 14427664 intergenic not near genes chr2L_7_14425001 chr2L_14425001 RAL-822 365 chr2L 14429400 14429449 chr2L 14429516 14429565 15 111 2.5 3.5 3.0 3.8 165 chr2L 14429400 3` UTR CR44732 - chr2L 14429482 3` UTR CR44732 - chr2L 14429565 3` UTR CR44732 - chr2L_15_14425001 chr2L_14425001 RAL-822 366 chr2L 14462701 14462822 chr2L 14462823 14462952 4 128 0.0 0.0 0.0 4.0 251 chr2L 14462701 intergenic not near genes chr2L 14462826 intergenic not near genes chr2L 14462952 intergenic not near genes chr2L_4_14460001 chr2L_14460001 RAL-822 367 chr2L 14502354 14502380 chr2L 14502436 14502485 7 85 0.0 3.0 1.5 2.8 131 chr2L 14502354 intergenic not near genes chr2L 14502420 intergenic not near genes chr2L 14502485 intergenic not near genes chr2L_7_14500001 chr2L_14500001 RAL-822 368 chr2L 14588350 14588410 chr2L 14588539 14588562 12 179 5.0 2.5 3.8 2.5 212 chr2L 14588350 intergenic CG42680 - chr2L 14588456 intergenic CG42680 - chr2L 14588562 intergenic CG42680 - chr2L_12_14585001 chr2L_14585001 RAL-822 369 chr2L 14621379 14621404 chr2L 14621475 14621539 7 113 5.5 1.5 3.5 1.6 160 chr2L 14621379 intron osp - chr2L 14621459 intron osp - chr2L 14621539 intron osp - chr2L_7_14620001 chr2L_14620001 RAL-822 370 chr2L 14624528 14624551 chr2L 14624637 14624665 9 112 4.5 2.5 3.5 2.0 137 chr2L 14624528 intron osp - chr2L 14624596 intron osp - chr2L 14624665 intron osp - chr2L_9_14620001 chr2L_14620001 RAL-822 371 chr2L 14694224 14694286 chr2L 14694383 14694445 14 156 4.5 3.0 3.8 2.9 221 chr2L 14694224 intergenic not near genes chr2L 14694334 intergenic not near genes chr2L 14694445 intergenic not near genes chr2L_14_14690001 chr2L_14690001 RAL-822 372 chr2L 14754901 14754943 chr2L 14755031 14755082 17 137 3.5 2.0 2.8 4.5 181 chr2L 14754901 intergenic not near genes chr2L 14754992 intergenic not near genes chr2L 14755082 intergenic not near genes chr2L_17_14750001 chr2L_14750001 RAL-822 373 chr2L 14778800 14778810 chr2L 14779096 14779104 4 298 5.0 3.5 4.2 0.8 304 chr2L 14778800 intergenic not near genes chr2L 14778952 intergenic not near genes chr2L 14779104 intergenic not near genes chr2L_4_14775001 chr2L_14775001 RAL-822 374 chr2L 14803845 14803911 chr2L 14809083 14809123 copia 7 5230 4.5 4.0 4.2 1.3 5278 chr2L 14803845 intergenic not near genes chr2L 14806484 intergenic not near genes chr2L 14809123 intergenic not near genes chr2L_7_14805001 chr2L_14805001 RAL-822 375 chr2L 14840982 14841002 chr2L 14841070 14841109 6 109 4.5 1.5 3.0 1.5 127 chr2L 14840982 3` UTR CR43805 - chr2L 14841046 3` UTR CR43805 - chr2L 14841109 3` UTR CR43805 - chr2L_6_14840001 chr2L_14840001 RAL-822 376 chr2L 14889940 14889981 chr2L 14890394 14890432 jockey 8 453 2.5 4.5 3.5 1.8 492 chr2L 14889940 intergenic not near genes chr2L 14890186 intergenic not near genes chr2L 14890432 intergenic not near genes chr2L_8_14890001 chr2L_14890001 RAL-822 377 chr2L 14933345 14933355 chr2L 14933458 14933463 4 112 9.0 4.0 6.5 0.5 118 chr2L 14933345 intron CG42313 - chr2L 14933404 intron CG42313 - chr2L 14933463 intron CG42313 - chr2L_4_14930001 chr2L_14930001 RAL-822 378 chr2L 14933363 14933386 chr2L 14933456 14933499 5 102 5.5 4.0 4.8 0.9 136 chr2L 14933363 intron CG42313 - chr2L 14933431 intron CG42313 - chr2L 14933499 intron CG42313 - chr2L_5_14930001 chr2L_14930001 RAL-822 379 chr2L 14984381 14984397 chr2L 14991992 14992009 opus 4 7624 2.5 2.5 2.5 1.1 7628 chr2L 14984381 intron mol - chr2L 14988195 intron mol - chr2L 14992009 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-822 380 chr2L 15021408 15021470 chr2L 15021519 15021581 19 109 8.0 8.5 8.2 2.1 173 chr2L 15021408 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021581 intron GABA-B-R1 + chr2L_19_15020001 chr2L_15020001 RAL-822 381 chr2L 15025986 15026047 chr2L 15026101 15026148 15 106 3.5 5.0 4.2 2.9 162 chr2L 15025986 exon GABA-B-R1 + chr2L 15026067 intron GABA-B-R1 + chr2L 15026148 intron GABA-B-R1 + chr2L_15_15025001 chr2L_15025001 RAL-822 382 chr2L 15044674 15044732 chr2L 15044784 15044828 9 104 3.0 0.5 1.8 3.2 154 chr2L 15044674 intergenic ck - chr2L 15044751 intergenic ck - chr2L 15044828 intergenic ck - chr2L_9_15040001 chr2L_15040001 RAL-822 383 chr2L 15077870 15078098 chr2L 15077983 15078185 23 107 2.0 2.5 2.2 7.2 315 chr2L 15077870 intron CG15270 + chr2L 15078028 intron CG15270 + chr2L 15078185 intron CG15270 + chr2L_23_15075001 chr2L_15075001 RAL-822 384 chr2L 15082630 15082689 chr2L 15082759 15082775 21 118 5.0 5.0 5.0 3.5 145 chr2L 15082630 intron CG15270 + chr2L 15082702 intron CG15270 + chr2L 15082775 intron CG15270 + chr2L_21_15080001 chr2L_15080001 RAL-822 385 chr2L 15103830 15103870 chr2L 15103957 15103981 17 128 9.5 7.5 8.5 1.8 151 chr2L 15103830 intergenic not near genes chr2L 15103906 intergenic not near genes chr2L 15103981 intergenic not near genes chr2L_17_15100001 chr2L_15100001 RAL-822 386 chr2L 15138960 15139001 chr2L 15139076 15139123 10 120 4.5 0.0 2.2 3.1 163 chr2L 15138960 intergenic not near genes chr2L 15139042 intergenic not near genes chr2L 15139123 intergenic not near genes chr2L_10_15135001 chr2L_15135001 RAL-822 387 chr2L 15195351 15195416 chr2L 15195489 15195493 11 110 2.0 2.0 2.0 3.7 142 chr2L 15195351 intron CG4168 - chr2L 15195422 intron CG4168 - chr2L 15195493 intron CG4168 - chr2L_11_15195001 chr2L_15195001 RAL-822 388 chr2L 15216091 15216129 chr2L 15216240 15216262 6 145 1.0 0.0 0.5 4.0 171 chr2L 15216091 3` UTR CG43230 + chr2L 15216176 intergenic CG43230 + chr2L 15216262 intergenic CG43230 + chr2L_6_15215001 chr2L_15215001 RAL-822 389 chr2L 15254170 15254221 chr2L 15254282 15254311 12 106 3.5 2.5 3.0 3.0 141 chr2L 15254170 3` UTR dao + chr2L 15254240 3` UTR dao + chr2L 15254311 3` UTR dao + chr2L_12_15250001 chr2L_15250001 RAL-822 390 chr2L 15309323 15309370 chr2L 15309461 15309508 10 136 5.0 1.0 3.0 2.5 185 chr2L 15309323 intergenic not near genes chr2L 15309416 intergenic not near genes chr2L 15309508 intergenic not near genes chr2L_10_15305001 chr2L_15305001 RAL-822 391 chr2L 15346020 15346030 chr2L 15346109 15346145 7 101 2.0 0.0 1.0 3.5 125 chr2L 15346020 intergenic not near genes chr2L 15346082 intergenic not near genes chr2L 15346145 intergenic not near genes chr2L_7_15345001 chr2L_15345001 RAL-822 392 chr2L 15403218 15403268 chr2L 15403316 15403382 4 110 0.5 0.0 0.2 3.3 164 chr2L 15403218 intergenic not near genes chr2L 15403300 intergenic not near genes chr2L 15403382 intergenic not near genes chr2L_4_15400001 chr2L_15400001 RAL-822 393 chr2L 15446037 15446075 chr2L 15453521 15453574 blood 18 7497 2.0 5.5 3.8 3.8 7537 chr2L 15446037 intergenic not near genes chr2L 15449806 intergenic not near genes chr2L 15453574 intergenic not near genes chr2L_18_15445001 chr2L_15445001 RAL-822 394 chr2L 15469535 15469595 chr2L 15469644 15469664 13 113 2.5 2.0 2.2 4.1 129 chr2L 15469535 intergenic CR45353 - chr2L 15469600 intergenic CR45353 - chr2L 15469664 intergenic CR45353 - chr2L_13_15465001 chr2L_15465001 RAL-822 395 chr2L 15514294 15514314 chr2L 15514413 15514421 5 114 12.0 6.0 9.0 0.5 127 chr2L 15514294 intergenic not near genes chr2L 15514358 intergenic not near genes chr2L 15514421 intergenic not near genes chr2L_5_15510001 chr2L_15510001 RAL-822 396 chr2L 15535859 15535885 chr2L 15535974 15536010 4 122 8.0 4.5 6.2 0.6 151 chr2L 15535859 intergenic not near genes chr2L 15535934 intergenic not near genes chr2L 15536010 intergenic not near genes chr2L_4_15535001 chr2L_15535001 RAL-822 397 chr2L 15535886 15535905 chr2L 15535973 15536030 5 117 5.5 4.5 5.0 0.8 144 chr2L 15535886 intergenic not near genes chr2L 15535958 intergenic not near genes chr2L 15536030 intergenic not near genes chr2L_5_15535001 chr2L_15535001 RAL-822 398 chr2L 15586389 15586424 chr2L 15593476 15593493 297 10 7082 8.5 7.0 7.8 1.1 7104 chr2L 15586389 intergenic not near genes chr2L 15589941 intergenic not near genes chr2L 15593493 intergenic not near genes chr2L_10_15585001 chr2L_15585001 RAL-822 399 chr2L 15598733 15598800 chr2L 15598847 15598912 17 108 2.5 1.0 1.8 6.1 179 chr2L 15598733 intergenic not near genes chr2L 15598822 intergenic not near genes chr2L 15598912 intergenic not near genes chr2L_17_15595001 chr2L_15595001 RAL-822 400 chr2L 15751436 15751464 chr2L 15751546 15751551 5 103 3.0 3.5 3.2 1.2 115 chr2L 15751436 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751494 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751551 intergenic snRNA:U5:35D -,l(2)35Di - chr2L_5_15750001 chr2L_15750001 RAL-822 401 chr2L 15761102 15761108 chr2L 15761197 15761203 5 107 0.0 7.0 3.5 1.1 101 chr2L 15761102 intron Gli - chr2L 15761152 intron Gli - chr2L 15761203 intron Gli - chr2L_5_15760001 chr2L_15760001 RAL-822 402 chr2L 15821021 15821078 chr2L 15821150 15821172 5 116 0.0 0.0 0.0 5.0 151 chr2L 15821021 intergenic not near genes chr2L 15821096 intergenic not near genes chr2L 15821172 intergenic not near genes chr2L_5_15820001 chr2L_15820001 RAL-822 403 chr2L 15826864 15826872 chr2L 15829293 15829300 Tabor 4 2429 0.5 6.5 3.5 0.9 2436 chr2L 15826864 intergenic not near genes chr2L 15828082 intergenic not near genes chr2L 15829300 intergenic not near genes chr2L_4_15825001 chr2L_15825001 RAL-822 404 chr2L 15826873 15826892 chr2L 15829292 15829314 Tabor 6 2422 0.5 6.5 3.5 1.3 2441 chr2L 15826873 intergenic not near genes chr2L 15828094 intergenic not near genes chr2L 15829314 intergenic not near genes chr2L_6_15825001 chr2L_15825001 RAL-822 405 chr2L 15950362 15950406 chr2L 15950460 15950508 8 108 2.0 2.0 2.0 2.7 146 chr2L 15950362 intron beat-Ib - chr2L 15950435 intron beat-Ib - chr2L 15950508 intron beat-Ib - chr2L_8_15950001 chr2L_15950001 RAL-822 406 chr2L 15954170 15954186 chr2L 15954262 15954276 9 107 8.0 3.5 5.8 1.3 106 chr2L 15954170 intron beat-Ib - chr2L 15954223 intron beat-Ib - chr2L 15954276 intron beat-Ib - chr2L_9_15950001 chr2L_15950001 RAL-822 407 chr2L 15956004 15956057 chr2L 15957491 15957544 hobo 12 1488 3.0 3.0 3.0 3.0 1540 chr2L 15956004 intron beat-Ib - chr2L 15956774 intron beat-Ib - chr2L 15957544 intron beat-Ib - chr2L_12_15955001 chr2L_15955001 RAL-822 408 chr2L 15962018 15962081 chr2L 15962151 15962179 17 125 1.5 1.0 1.2 7.7 161 chr2L 15962018 5` UTR beat-Ib - chr2L 15962098 5` UTR beat-Ib - chr2L 15962179 5` UTR beat-Ib - chr2L_17_15960001 chr2L_15960001 RAL-822 409 chr2L 16022172 16022218 chr2L 16022509 16022529 10 325 4.0 0.5 2.2 3.1 357 chr2L 16022172 intron beat-Ic + chr2L 16022350 intron beat-Ic + chr2L 16022529 intron beat-Ic + chr2L_10_16020001 chr2L_16020001 RAL-822 410 chr2L 16141179 16141193 chr2L 16146404 16146435 copia 4 5236 0.5 8.0 4.2 0.8 5256 chr2L 16141179 intergenic not near genes chr2L 16143807 intergenic not near genes chr2L 16146435 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-822 411 chr2L 16153732 16153761 chr2L 16160811 16160864 297 9 7096 2.5 2.5 2.5 2.6 7132 chr2L 16153732 intergenic not near genes chr2L 16157298 intergenic not near genes chr2L 16160864 intergenic not near genes chr2L_9_16155001 chr2L_16155001 RAL-822 412 chr2L 9084338 9084340 chr2L 16217660 16217660 6 7133321 10.5 21.0 15.8 0.4 7133322 chr2L 9084338 intron Toll-4 + chr2L 12650999 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_12650001 chr2L_12650001 RAL-822 413 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 10.0 21.0 15.5 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-822 414 chr2L 16254858 16254919 chr2L 16255152 16255208 23 289 6.0 7.5 6.8 2.9 350 chr2L 16254858 intron PRL-1 - chr2L 16255033 intron PRL-1 - chr2L 16255208 intron PRL-1 - chr2L_23_16255001 chr2L_16255001 RAL-822 415 chr2L 16298708 16298747 chr2L 16298804 16298815 7 92 3.5 2.5 3.0 1.8 107 chr2L 16298708 intron heix - chr2L 16298762 intron heix - chr2L 16298815 intron heix - chr2L_7_16295001 chr2L_16295001 RAL-822 416 chr2L 16339816 16339858 chr2L 16339922 16339960 5 98 1.5 2.5 2.0 1.7 144 chr2L 16339816 exon CG42266 - chr2L 16339888 exon CG42266 - chr2L 16339960 exon CG42266 - chr2L_5_16335001 chr2L_16335001 RAL-822 417 chr2L 16354765 16354782 chr2L 16354877 16354899 5 115 3.0 3.5 3.2 1.2 134 chr2L 16354765 intergenic CaBP1 -,CG4455 + chr2L 16354832 intergenic CaBP1 -,CG4455 + chr2L 16354899 3` UTR CaBP1 - chr2L_5_16350001 chr2L_16350001 RAL-822 418 chr2L 16363906 16363973 chr2L 16364187 16364254 12 279 2.0 4.0 3.0 3.0 348 chr2L 16363906 intergenic not near genes chr2L 16364080 intergenic not near genes chr2L 16364254 intergenic not near genes chr2L_12_16360001 chr2L_16360001 RAL-822 419 chr2L 16365451 16365471 chr2L 16365631 16365656 6 181 1.0 3.5 2.2 1.9 205 chr2L 16365451 intergenic jhamt + chr2L 16365554 intergenic jhamt + chr2L 16365656 intergenic jhamt + chr2L_6_16365001 chr2L_16365001 RAL-822 420 chr2L 16408100 16408153 chr2L 16408227 16408289 5 132 0.0 2.0 1.0 2.5 189 chr2L 16408100 intron CG5888 - chr2L 16408194 intron CG5888 - chr2L 16408289 intron CG5888 - chr2L_5_16405001 chr2L_16405001 RAL-822 421 chr2L 16487862 16487927 chr2L 16488007 16488049 12 138 3.0 3.0 3.0 3.0 187 chr2L 16487862 intergenic CG4580 + chr2L 16487956 intergenic CG4580 + chr2L 16488049 intergenic CG4580 + chr2L_12_16485001 chr2L_16485001 RAL-822 422 chr2L 16492699 16492761 chr2L 16492827 16492859 15 116 5.5 3.5 4.5 2.7 160 chr2L 16492699 intron Tpr2 + chr2L 16492779 intron Tpr2 + chr2L 16492859 intron Tpr2 + chr2L_15_16490001 chr2L_16490001 RAL-822 423 chr2L 16504085 16504131 chr2L 16504338 16504387 11 259 1.5 1.5 1.5 4.4 302 chr2L 16504085 intron Tpr2 + chr2L 16504236 intron Tpr2 + chr2L 16504387 intron Tpr2 + chr2L_11_16500001 chr2L_16500001 RAL-822 424 chr2L 16511931 16511987 chr2L 16519078 16519131 HMS-Beagle 13 7143 7.5 7.5 7.5 1.5 7200 chr2L 16511931 intron CG5953 - chr2L 16515531 intron CG5953 - chr2L 16519131 intron CG5953 - chr2L_13_16515001 chr2L_16515001 RAL-822 425 chr2L 16537301 16537356 chr2L 16537412 16537452 15 108 8.0 5.0 6.5 2.0 151 chr2L 16537301 intergenic not near genes chr2L 16537376 intergenic not near genes chr2L 16537452 intergenic not near genes chr2L_15_16535001 chr2L_16535001 RAL-822 426 chr2L 16809630 16809640 chr2L 16809778 16809803 5 159 0.0 0.0 0.0 5.0 173 chr2L 16809630 intron,intron CG13280 -,CG13272 + chr2L 16809716 intron,intron CG13280 -,CG13272 + chr2L 16809803 intron,intron CG13280 -,CG13272 + chr2L_5_16805001 chr2L_16805001 RAL-822 427 chr2L 16866990 16867035 chr2L 16867120 16867165 12 129 3.5 3.5 3.5 2.7 175 chr2L 16866990 intergenic not near genes chr2L 16867078 intergenic not near genes chr2L 16867165 intergenic not near genes chr2L_12_16865001 chr2L_16865001 RAL-822 428 chr2L 16952655 16952713 chr2L 16952796 16952857 9 131 0.5 3.0 1.8 3.2 202 chr2L 16952655 intergenic not near genes chr2L 16952756 intergenic not near genes chr2L 16952857 intergenic not near genes chr2L_9_16950001 chr2L_16950001 RAL-822 429 chr2L 16958086 16958133 chr2L 16962899 16962955 Doc 17 4817 5.0 2.5 3.8 3.5 4869 chr2L 16958086 intergenic not near genes chr2L 16960520 intergenic not near genes chr2L 16962955 intergenic not near genes chr2L_17_16960001 chr2L_16960001 RAL-822 430 chr2L 17052378 17052441 chr2L 17052525 17052570 9 142 3.0 1.5 2.2 2.8 192 chr2L 17052378 intergenic not near genes chr2L 17052474 intergenic not near genes chr2L 17052570 intergenic not near genes chr2L_9_17050001 chr2L_17050001 RAL-822 431 chr2L 17053275 17053308 chr2L 17053693 17053733 8 420 2.5 2.0 2.2 2.5 458 chr2L 17053275 intergenic not near genes chr2L 17053504 intergenic not near genes chr2L 17053733 intergenic not near genes chr2L_8_17050001 chr2L_17050001 RAL-822 432 chr2L 17058414 17058422 chr2L 17058602 17058605 4 187 10.0 9.5 9.8 0.4 191 chr2L 17058414 intergenic not near genes chr2L 17058510 intergenic not near genes chr2L 17058605 intergenic not near genes chr2L_4_17055001 chr2L_17055001 RAL-822 433 chr2L 17062740 17062786 chr2L 17062842 17062903 10 113 2.5 2.0 2.2 3.1 163 chr2L 17062740 intergenic not near genes chr2L 17062822 intergenic not near genes chr2L 17062903 intergenic not near genes chr2L_10_17060001 chr2L_17060001 RAL-822 434 chr2L 17070150 17070209 chr2L 17070295 17070326 21 141 4.0 5.0 4.5 3.8 176 chr2L 17070150 intergenic not near genes chr2L 17070238 intergenic not near genes chr2L 17070326 intergenic not near genes chr2L_21_17070001 chr2L_17070001 RAL-822 435 chr2L 17102990 17103034 chr2L 17103113 17103157 4 120 2.5 2.5 2.5 1.1 167 chr2L 17102990 intergenic not near genes chr2L 17103074 intergenic not near genes chr2L 17103157 intergenic not near genes chr2L_4_17100001 chr2L_17100001 RAL-822 436 chr2L 17167542 17167594 chr2L 17167806 17167868 pogo 11 270 2.5 3.5 3.0 2.8 326 chr2L 17167542 intron,intron CG34106 +,beat-IIIa + chr2L 17167705 intron,intron CG34106 +,beat-IIIa + chr2L 17167868 intron,intron CG34106 +,beat-IIIa + chr2L_11_17165001 chr2L_17165001 RAL-822 437 chr2L 17199160 17199173 chr2L 17200636 17200662 hobo 5 1492 6.0 6.5 6.2 0.7 1502 chr2L 17199160 intron beat-IIIc - chr2L 17199911 intron beat-IIIc - chr2L 17200662 intron beat-IIIc - chr2L_5_17195001 chr2L_17195001 RAL-822 438 chr2L 17199174 17199184 chr2L 17200624 17200686 hobo 6 1490 5.5 5.0 5.2 1.0 1512 chr2L 17199174 intron beat-IIIc - chr2L 17199930 intron beat-IIIc - chr2L 17200686 intron beat-IIIc - chr2L_6_17195001 chr2L_17195001 RAL-822 439 chr2L 17273187 17273226 chr2L 17277975 17277988 F-element 8 4796 1.5 4.5 3.0 2.0 4801 chr2L 17273187 intergenic not near genes chr2L 17275588 intergenic not near genes chr2L 17277988 intergenic not near genes chr2L_8_17275001 chr2L_17275001 RAL-822 440 chr2L 17306240 17306305 chr2L 17306353 17306408 10 106 2.5 4.5 3.5 2.2 168 chr2L 17306240 intergenic not near genes chr2L 17306324 intergenic not near genes chr2L 17306408 intergenic not near genes chr2L_10_17305001 chr2L_17305001 RAL-822 441 chr2L 17310978 17311013 chr2L 17311098 17311122 11 126 3.5 5.5 4.5 2.0 144 chr2L 17310978 intergenic CG34170 - chr2L 17311050 intergenic CG34170 - chr2L 17311122 intergenic CG34170 - chr2L_11_17310001 chr2L_17310001 RAL-822 442 chr2L 17327917 17327924 chr2L 17328003 17328045 4 112 4.0 7.5 5.8 0.6 128 chr2L 17327917 intergenic not near genes chr2L 17327981 intergenic not near genes chr2L 17328045 intergenic not near genes chr2L_4_17325001 chr2L_17325001 RAL-822 443 chr2L 17359994 17360032 chr2L 17360207 17360238 10 212 4.0 1.5 2.8 2.6 244 chr2L 17359994 intergenic not near genes chr2L 17360116 intergenic not near genes chr2L 17360238 intergenic not near genes chr2L_10_17360001 chr2L_17360001 RAL-822 444 chr2L 17379680 17379697 chr2L 17379800 17379817 6 119 9.0 4.5 6.8 0.8 137 chr2L 17379680 intron Lrch - chr2L 17379748 intron Lrch - chr2L 17379817 intron Lrch - chr2L_6_17375001 chr2L_17375001 RAL-822 445 chr2L 17386012 17386034 chr2L 17386098 17386150 5 105 4.0 6.0 5.0 0.8 138 chr2L 17386012 intron CLIP-190 + chr2L 17386081 intron CLIP-190 + chr2L 17386150 intron CLIP-190 + chr2L_5_17385001 chr2L_17385001 RAL-822 446 chr2L 17399313 17399362 chr2L 17399426 17399499 12 132 3.5 0.0 1.8 4.3 186 chr2L 17399313 intron CLIP-190 + chr2L 17399406 intron CLIP-190 + chr2L 17399499 intron CLIP-190 + chr2L_12_17395001 chr2L_17395001 RAL-822 447 chr2L 17425747 17425792 chr2L 17425899 17425954 14 158 4.5 5.5 5.0 2.3 207 chr2L 17425747 intron Dif - chr2L 17425850 intron Dif - chr2L 17425954 intron Dif - chr2L_14_17425001 chr2L_17425001 RAL-822 448 chr2L 17432020 17432044 chr2L 17432142 17432186 1360 5 135 0.0 7.5 3.8 1.0 166 chr2L 17432020 intron Dif - chr2L 17432103 intron Dif - chr2L 17432186 intron Dif - chr2L_5_17430001 chr2L_17430001 RAL-822 449 chr2L 17469043 17469054 chr2L 17469306 17469323 4 271 7.5 1.5 4.5 0.7 280 chr2L 17469043 intron BicD - chr2L 17469183 intron BicD - chr2L 17469323 intron BicD - chr2L_4_17465001 chr2L_17465001 RAL-822 450 chr2L 17469056 17469076 chr2L 17469300 17469361 7 261 5.5 1.5 3.5 1.6 305 chr2L 17469056 intron BicD - chr2L 17469208 intron BicD - chr2L 17469361 intron BicD - chr2L_7_17465001 chr2L_17465001 RAL-822 451 chr2L 17511600 17511646 chr2L 17511777 17511814 6 174 3.5 1.5 2.5 1.7 214 chr2L 17511600 exon Dhc36C + chr2L 17511707 intron Dhc36C + chr2L 17511814 intron Dhc36C + chr2L_6_17510001 chr2L_17510001 RAL-822 452 chr2L 17669097 17669112 chr2L 17669191 17669223 6 101 7.5 5.0 6.2 0.8 126 chr2L 17669097 intron CadN - chr2L 17669160 intron CadN - chr2L 17669223 intron CadN - chr2L_6_17665001 chr2L_17665001 RAL-822 453 chr2L 17669113 17669122 chr2L 17669190 17669228 7 97 6.5 5.0 5.8 1.0 115 chr2L 17669113 intron CadN - chr2L 17669170 intron CadN - chr2L 17669228 intron CadN - chr2L_7_17665001 chr2L_17665001 RAL-822 454 chr2L 17687494 17687520 chr2L 17692272 17692290 F-element 6 4778 2.0 2.5 2.2 1.9 4796 chr2L 17687494 intron CadN - chr2L 17689892 intron CadN - chr2L 17692290 intron CadN - chr2L_6_17685001 chr2L_17685001 RAL-822 455 chr2L 17723758 17723794 chr2L 17723886 17723922 8 124 3.5 3.0 3.2 1.9 164 chr2L 17723758 intron CadN - chr2L 17723840 intron CadN - chr2L 17723922 intron CadN - chr2L_8_17720001 chr2L_17720001 RAL-822 456 chr2L 17759565 17759609 chr2L 17759682 17759736 15 121 5.0 4.5 4.8 2.6 171 chr2L 17759565 intron CadN - chr2L 17759650 intron CadN - chr2L 17759736 intron CadN - chr2L_15_17755001 chr2L_17755001 RAL-822 457 chr2L 17769415 17769464 chr2L 17769534 17769592 5 125 1.5 3.5 2.5 1.4 177 chr2L 17769415 intron CadN - chr2L 17769504 intron CadN - chr2L 17769592 intron CadN - chr2L_5_17765001 chr2L_17765001 RAL-822 458 chr2L 17790187 17790220 chr2L 17790303 17790327 8 116 1.5 3.5 2.5 2.3 140 chr2L 17790187 intron CadN2 - chr2L 17790257 intron CadN2 - chr2L 17790327 intron CadN2 - chr2L_8_17790001 chr2L_17790001 RAL-822 459 chr2L 17819920 17819945 chr2L 17825127 17825157 copia 5 5227 6.0 2.0 4.0 1.0 5237 chr2L 17819920 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825157 intron CadN2 - chr2L_5_17820001 chr2L_17820001 RAL-822 460 chr2L 17951931 17951975 chr2L 17953411 17953476 hobo 24 1493 2.5 4.5 3.5 5.3 1545 chr2L 17951931 intergenic CR44398 -,CR44397 - chr2L 17952704 intergenic not near genes chr2L 17953476 intergenic not near genes chr2L_24_17950001 chr2L_17950001 RAL-822 461 chr2L 17989974 17990026 chr2L 17990073 17990092 10 86 19.5 18.5 19.0 0.5 118 chr2L 17989974 intergenic Prosbeta5R2 + chr2L 17990033 intergenic Prosbeta5R2 + chr2L 17990092 intergenic Prosbeta5R2 + chr2L_10_17990001 chr2L_17990001 RAL-822 462 chr2L 17988365 17988365 chr2L 17991928 17991975 6 3574 27.5 24.0 25.8 0.2 3610 chr2L 17988365 3` UTR CG5681 + chr2L 17990170 intergenic Prosbeta5R2 + chr2L 17991975 intergenic Prosbeta5R2 + chr2L_6_17990001 chr2L_17990001 RAL-822 463 chr2L 18051882 18051902 chr2L 18061029 18061071 roo 9 9161 5.5 5.5 5.5 1.4 9189 chr2L 18051882 intron rdo + chr2L 18056476 intron rdo + chr2L 18061071 intron rdo + chr2L_9_18055001 chr2L_18055001 RAL-822 464 chr2L 18110058 18110074 chr2L 18110193 18110209 5 135 8.0 2.0 5.0 0.8 151 chr2L 18110058 intergenic not near genes chr2L 18110134 intergenic not near genes chr2L 18110209 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-822 465 chr2L 18110075 18110107 chr2L 18110188 18110242 6 129 4.5 2.0 3.2 1.4 167 chr2L 18110075 intergenic not near genes chr2L 18110158 intergenic not near genes chr2L 18110242 intergenic not near genes chr2L_6_18110001 chr2L_18110001 RAL-822 466 chr2L 18240713 18240730 chr2L 18240935 18240957 4 235 1.0 3.5 2.2 1.2 244 chr2L 18240713 intron CG42750 - chr2L 18240835 intron CG42750 - chr2L 18240957 intron CG42750 - chr2L_4_18240001 chr2L_18240001 RAL-822 467 chr2L 18264033 18264090 chr2L 18264145 18264191 8 107 2.0 3.0 2.5 2.3 158 chr2L 18264033 intron CG42750 - chr2L 18264112 intron CG42750 - chr2L 18264191 intron CG42750 - chr2L_8_18260001 chr2L_18260001 RAL-822 468 chr2L 18274013 18274070 chr2L 18274126 18274178 12 113 3.5 4.0 3.8 2.5 165 chr2L 18274013 intron CG42750 - chr2L 18274096 intron CG42750 - chr2L 18274178 intron CG42750 - chr2L_12_18270001 chr2L_18270001 RAL-822 469 chr2L 18303944 18303999 chr2L 18304068 18304123 11 120 2.0 2.5 2.2 3.4 179 chr2L 18303944 intergenic not near genes chr2L 18304034 intergenic not near genes chr2L 18304123 intergenic not near genes chr2L_11_18300001 chr2L_18300001 RAL-822 470 chr2L 18355869 18355877 chr2L 18356025 18356033 4 155 6.0 0.0 3.0 1.0 164 chr2L 18355869 intron Fas3 + chr2L 18355951 intron Fas3 + chr2L 18356033 intron Fas3 + chr2L_4_18355001 chr2L_18355001 RAL-822 471 chr2L 18408012 18408060 chr2L 18412828 18412882 Doc 7 4814 2.0 0.0 1.0 3.5 4870 chr2L 18408012 intergenic not near genes chr2L 18410447 intergenic not near genes chr2L 18412882 intergenic not near genes chr2L_7_18410001 chr2L_18410001 RAL-822 472 chr2L 18439052 18439109 chr2L 18439165 18439225 22 114 4.0 4.5 4.2 4.2 173 chr2L 18439052 intergenic not near genes chr2L 18439138 intergenic not near genes chr2L 18439225 intergenic not near genes chr2L_22_18435001 chr2L_18435001 RAL-822 473 chr2L 18442359 18442376 chr2L 18442440 18442461 5 88 0.0 3.5 1.8 1.8 102 chr2L 18442359 3` UTR RpS26 - chr2L 18442410 3` UTR RpS26 - chr2L 18442461 3` UTR RpS26 - chr2L_5_18440001 chr2L_18440001 RAL-822 474 chr2L 18449356 18449416 chr2L 18449492 18449541 11 127 3.5 2.5 3.0 2.8 185 chr2L 18449356 intergenic bsf -,ncm - chr2L 18449448 intergenic bsf -,ncm - chr2L 18449541 3` UTR bsf - chr2L_11_18445001 chr2L_18445001 RAL-822 475 chr2L 18509789 18509808 chr2L 18509968 18509968 6 172 0.0 2.5 1.2 2.7 179 chr2L 18509789 intron CG10178 + chr2L 18509878 intron CG10178 + chr2L 18509968 intron CG10178 + chr2L_6_18505001 chr2L_18505001 RAL-822 476 chr2L 18762338 18762372 chr2L 18762447 18762486 6 112 7.0 1.5 4.2 1.2 148 chr2L 18762338 intergenic not near genes chr2L 18762412 intergenic ham - chr2L 18762486 intergenic ham - chr2L_6_18760001 chr2L_18760001 RAL-822 477 chr2L 18767632 18767666 chr2L 18767729 18767767 12 99 3.5 10.0 6.8 1.5 135 chr2L 18767632 intron ham - chr2L 18767700 intron ham - chr2L 18767767 intron ham - chr2L_12_18765001 chr2L_18765001 RAL-822 478 chr2L 18816745 18816766 chr2L 18816873 18816923 9 154 1.5 5.5 3.5 2.0 178 chr2L 18816745 intergenic not near genes chr2L 18816834 intergenic not near genes chr2L 18816923 intergenic not near genes chr2L_9_18815001 chr2L_18815001 RAL-822 479 chr2L 18883843 18883883 chr2L 18883940 18883979 11 99 3.0 2.0 2.5 3.1 136 chr2L 18883843 intergenic not near genes chr2L 18883911 intergenic not near genes chr2L 18883979 intergenic not near genes chr2L_11_18880001 chr2L_18880001 RAL-822 480 chr2L 18981749 18981764 chr2L 18981831 18981870 5 92 6.5 1.5 4.0 1.0 121 chr2L 18981749 intron Swip-1 - chr2L 18981810 intron Swip-1 - chr2L 18981870 intron Swip-1 - chr2L_5_18980001 chr2L_18980001 RAL-822 481 chr2L 18981766 18981779 chr2L 18981828 18981880 4 88 2.5 1.5 2.0 1.3 114 chr2L 18981766 intron Swip-1 - chr2L 18981823 intron Swip-1 - chr2L 18981880 intron Swip-1 - chr2L_4_18980001 chr2L_18980001 RAL-822 482 chr2L 19144894 19144937 chr2L 19145007 19145050 10 111 8.0 4.5 6.2 1.4 156 chr2L 19144894 intron brat + chr2L 19144972 intron brat + chr2L 19145050 intron brat + chr2L_10_19140001 chr2L_19140001 RAL-822 483 chr2L 19147366 19147399 chr2L 19154411 19154463 297 10 7055 2.0 5.5 3.8 2.1 7097 chr2L 19147366 intron brat + chr2L 19150914 intron brat + chr2L 19154463 intron brat + chr2L_10_19150001 chr2L_19150001 RAL-822 484 chr2L 19246098 19246108 chr2L 19246437 19246454 4 352 3.0 2.5 2.8 1.1 356 chr2L 19246098 intergenic not near genes chr2L 19246276 intergenic not near genes chr2L 19246454 intergenic not near genes chr2L_4_19245001 chr2L_19245001 RAL-822 485 chr2L 19246792 19246850 chr2L 19246907 19246945 13 108 4.0 4.0 4.0 2.6 153 chr2L 19246792 intergenic not near genes chr2L 19246868 intergenic not near genes chr2L 19246945 intergenic not near genes chr2L_13_19245001 chr2L_19245001 RAL-822 486 chr2L 19345012 19345046 chr2L 19357223 19357290 blood 6 12227 1.5 2.0 1.8 2.1 12278 chr2L 19345012 intron dnt - chr2L 19351151 intron dnt - chr2L 19357290 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-822 487 chr2L 19357516 19357569 chr2L 19357641 19357680 14 111 4.5 7.5 6.0 2.0 164 chr2L 19357516 intron dnt - chr2L 19357598 intron dnt - chr2L 19357680 intron dnt - chr2L_14_19355001 chr2L_19355001 RAL-822 488 chr2L 19374906 19374921 chr2L 19375061 19375081 6 156 8.5 1.5 5.0 1.0 175 chr2L 19374906 intergenic not near genes chr2L 19374994 intergenic not near genes chr2L 19375081 intergenic not near genes chr2L_6_19370001 chr2L_19370001 RAL-822 489 chr2L 19374924 19374961 chr2L 19375056 19375085 10 147 2.5 1.5 2.0 3.3 161 chr2L 19374924 intergenic not near genes chr2L 19375004 intergenic not near genes chr2L 19375085 intergenic not near genes chr2L_10_19375001 chr2L_19375001 RAL-822 490 chr2L 19405585 19405642 chr2L 19405710 19405757 13 118 3.0 2.5 2.8 3.4 172 chr2L 19405585 intron Pax - chr2L 19405671 intron Pax - chr2L 19405757 intron Pax - chr2L_13_19405001 chr2L_19405001 RAL-822 491 chr2L 19407707 19407736 chr2L 19407915 19407963 11 226 2.5 4.0 3.2 2.6 256 chr2L 19407707 intron Pax - chr2L 19407835 intron Pax - chr2L 19407963 intron Pax - chr2L_11_19405001 chr2L_19405001 RAL-822 492 chr2L 19437488 19437527 chr2L 19437615 19437654 6 125 4.0 0.5 2.2 1.9 166 chr2L 19437488 intron CG10237 - chr2L 19437571 intron CG10237 - chr2L 19437654 intron CG10237 - chr2L_6_19435001 chr2L_19435001 RAL-822 493 chr2L 19441033 19441070 chr2L 19441144 19441180 11 108 5.5 5.0 5.2 1.8 147 chr2L 19441033 intron CG10237 - chr2L 19441106 intron CG10237 - chr2L 19441180 5` UTR CG10237 - chr2L_11_19440001 chr2L_19440001 RAL-822 494 chr2L 19562545 19562562 chr2L 19562629 19562639 6 90 0.0 3.0 1.5 2.4 94 chr2L 19562545 intron Tep5 + chr2L 19562592 intron Tep5 + chr2L 19562639 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-822 495 chr2L 19608574 19608596 chr2L 19608700 19608722 5 123 4.0 4.5 4.2 1.0 148 chr2L 19608574 intron Lar + chr2L 19608648 intron Lar + chr2L 19608722 intron Lar + chr2L_5_19605001 chr2L_19605001 RAL-822 496 chr2L 19620108 19620128 chr2L 19621082 19621140 jockey 5 1003 3.5 2.0 2.8 1.3 1032 chr2L 19620108 intron Lar + chr2L 19620624 intron Lar + chr2L 19621140 intron Lar + chr2L_5_19620001 chr2L_19620001 RAL-822 497 chr2L 19652541 19652597 chr2L 19674012 19674068 opus 13 21469 5.0 5.5 5.2 2.1 21527 chr2L 19652541 intron Lar + chr2L 19663304 intron Lar + chr2L 19674068 intron Lar + chr2L_13_19660001 chr2L_19660001 RAL-822 498 chr2L 19689030 19689065 chr2L 19689169 19689204 6 132 4.0 1.0 2.5 1.7 174 chr2L 19689030 intron Lar + chr2L 19689117 intron Lar + chr2L 19689204 intron Lar + chr2L_6_19685001 chr2L_19685001 RAL-822 499 chr2L 19697104 19697167 chr2L 19697227 19697272 17 114 3.5 1.0 2.2 5.3 168 chr2L 19697104 intron Lar + chr2L 19697188 intron Lar + chr2L 19697272 intron Lar + chr2L_17_19695001 chr2L_19695001 RAL-822 500 chr2L 19703510 19703555 chr2L 19712677 19712698 roo 15 9162 7.0 1.5 4.2 2.9 9188 chr2L 19703510 intron Lar + chr2L 19708104 intron Lar + chr2L 19712698 intron Lar + chr2L_15_19705001 chr2L_19705001 RAL-822 501 chr2L 19712697 19712721 chr2L 19712773 19712805 5 88 1.5 4.0 2.8 1.3 108 chr2L 19712697 intron Lar + chr2L 19712751 intron Lar + chr2L 19712805 intron Lar + chr2L_5_19710001 chr2L_19710001 RAL-822 502 chr2L 19737360 19737384 chr2L 19740827 19740855 1360 7 3469 2.5 4.0 3.2 1.7 3495 chr2L 19737360 intergenic Nf-YB + chr2L 19739108 intergenic not near genes chr2L 19740855 intergenic not near genes chr2L_7_19735001 chr2L_19735001 RAL-822 503 chr2L 19773131 19773190 chr2L 19773253 19773287 13 118 4.5 4.5 4.5 2.4 156 chr2L 19773131 intergenic not near genes chr2L 19773209 intergenic not near genes chr2L 19773287 intergenic not near genes chr2L_13_19770001 chr2L_19770001 RAL-822 504 chr2L 19776629 19776659 chr2L 19776742 19776754 6 110 8.5 5.5 7.0 0.8 125 chr2L 19776629 3` UTR CdGAPr - chr2L 19776692 3` UTR CdGAPr - chr2L 19776754 3` UTR CdGAPr - chr2L_6_19775001 chr2L_19775001 RAL-822 505 chr2L 19824401 19824428 chr2L 19824519 19824546 7 118 2.0 6.5 4.2 1.3 145 chr2L 19824401 intron sick + chr2L 19824474 intron sick + chr2L 19824546 intron sick + chr2L_7_19820001 chr2L_19820001 RAL-822 506 chr2L 19837249 19837293 chr2L 19837359 19837393 16 104 7.5 3.0 5.2 2.6 144 chr2L 19837249 intron sick + chr2L 19837321 intron sick + chr2L 19837393 intron sick + chr2L_16_19835001 chr2L_19835001 RAL-822 507 chr2L 19846235 19846276 chr2L 19846337 19846391 15 110 0.0 7.0 3.5 3.3 156 chr2L 19846235 intron sick + chr2L 19846313 intron sick + chr2L 19846391 intron sick + chr2L_15_19845001 chr2L_19845001 RAL-822 508 chr2L 19890074 19890091 chr2L 19890183 19890205 5 112 2.0 2.5 2.2 1.6 131 chr2L 19890074 intron sick + chr2L 19890140 intron sick + chr2L 19890205 intron,3` UTR sick +,CG10481 - chr2L_5_19890001 chr2L_19890001 RAL-822 509 chr2L 19911291 19911304 chr2L 19911382 19911402 7 98 2.0 4.0 3.0 1.8 111 chr2L 19911291 intron,3` UTR sick +,CR43097 - chr2L 19911346 intron,3` UTR sick +,CR43097 - chr2L 19911402 intron,3` UTR sick +,CR43097 - chr2L_7_19910001 chr2L_19910001 RAL-822 510 chr2L 19912768 19912781 chr2L 19912871 19912934 6 143 0.0 2.0 1.0 3.0 166 chr2L 19912768 intron sick + chr2L 19912851 intron sick + chr2L 19912934 intron sick + chr2L_6_19910001 chr2L_19910001 RAL-822 511 chr2L 19947676 19947735 chr2L 19947796 19947846 9 116 0.5 3.0 1.8 3.2 170 chr2L 19947676 intron sick + chr2L 19947761 intron sick + chr2L 19947846 intron sick + chr2L_9_19945001 chr2L_19945001 RAL-822 512 chr2L 19964824 19964869 chr2L 19964918 19964924 14 90 5.5 2.0 3.8 2.9 100 chr2L 19964824 intron CG10680 + chr2L 19964874 exon CG10680 + chr2L 19964924 exon CG10680 + chr2L_14_19960001 chr2L_19960001 RAL-822 513 chr2L 19973326 19973343 chr2L 19973438 19973451 7 107 10.0 3.5 6.8 0.9 125 chr2L 19973326 intron CG43861 - chr2L 19973388 intron CG43861 - chr2L 19973451 intron CG43861 - chr2L_7_19970001 chr2L_19970001 RAL-822 514 chr2L 19973351 19973385 chr2L 19973437 19973465 10 96 2.5 3.5 3.0 2.5 114 chr2L 19973351 intron CG43861 - chr2L 19973408 intron CG43861 - chr2L 19973465 intron CG43861 - chr2L_10_19970001 chr2L_19970001 RAL-822 515 chr2L 20005840 20005903 chr2L 20010951 20011008 flea 15 5107 5.5 5.5 5.5 2.3 5168 chr2L 20005840 intron CG43861 - chr2L 20008424 intron CG43861 - chr2L 20011008 intron CG43861 - chr2L_15_20005001 chr2L_20005001 RAL-822 516 chr2L 20022054 20022103 chr2L 20022202 20022246 12 143 12.0 3.5 7.8 1.4 192 chr2L 20022054 intergenic not near genes chr2L 20022150 intergenic not near genes chr2L 20022246 intergenic not near genes chr2L_12_20020001 chr2L_20020001 RAL-822 517 chr2L 20026581 20026628 chr2L 20026692 20026732 11 109 2.0 6.0 4.0 2.2 151 chr2L 20026581 intergenic not near genes chr2L 20026656 intergenic not near genes chr2L 20026732 intergenic not near genes chr2L_11_20025001 chr2L_20025001 RAL-822 518 chr2L 20041402 20041461 chr2L 20041517 20041536 8 98 3.5 1.5 2.5 2.3 134 chr2L 20041402 intron sNPF + chr2L 20041469 intron sNPF + chr2L 20041536 intron sNPF + chr2L_8_20040001 chr2L_20040001 RAL-822 519 chr2L 20057047 20057058 chr2L 20057131 20057146 5 99 5.0 6.5 5.8 0.7 99 chr2L 20057047 intergenic not near genes chr2L 20057096 intergenic not near genes chr2L 20057146 intergenic not near genes chr2L_5_20055001 chr2L_20055001 RAL-822 520 chr2L 20079495 20079540 chr2L 20079636 20079684 11 145 6.0 0.5 3.2 2.6 189 chr2L 20079495 intron,intron neb +,fok - chr2L 20079590 intron,intron neb +,fok - chr2L 20079684 intron,intron neb +,fok - chr2L_11_20075001 chr2L_20075001 RAL-822 521 chr2L 20098679 20098747 chr2L 20098997 20099066 15 314 2.0 1.5 1.8 5.4 387 chr2L 20098679 intron Kua + chr2L 20098872 intron Kua + chr2L 20099066 intron Kua + chr2L_15_20095001 chr2L_20095001 RAL-822 522 chr2L 20122618 20122646 chr2L 20122728 20122768 7 122 7.0 5.0 6.0 1.0 150 chr2L 20122618 intergenic not near genes chr2L 20122693 intergenic not near genes chr2L 20122768 intergenic not near genes chr2L_7_20120001 chr2L_20120001 RAL-822 523 chr2L 20226245 20226284 chr2L 20226339 20226390 8 94 2.0 4.0 3.0 2.0 145 chr2L 20226245 intergenic not near genes chr2L 20226318 intergenic not near genes chr2L 20226390 intergenic not near genes chr2L_8_20225001 chr2L_20225001 RAL-822 524 chr2L 20236492 20236540 chr2L 20236588 20236651 12 106 8.0 4.0 6.0 1.7 159 chr2L 20236492 intergenic not near genes chr2L 20236572 intergenic not near genes chr2L 20236651 intergenic not near genes chr2L_12_20235001 chr2L_20235001 RAL-822 525 chr2L 20250935 20250948 chr2L 20251028 20251041 4 98 6.5 6.5 6.5 0.5 106 chr2L 20250935 intergenic not near genes chr2L 20250988 intergenic not near genes chr2L 20251041 intergenic not near genes chr2L_4_20250001 chr2L_20250001 RAL-822 526 chr2L 20272091 20272139 chr2L 20282831 20282875 copia 14 10741 8.5 4.5 6.5 1.9 10784 chr2L 20272091 intergenic not near genes chr2L 20277483 intergenic not near genes chr2L 20282875 intergenic not near genes chr2L_14_20275001 chr2L_20275001 RAL-822 527 chr2L 20294281 20294311 chr2L 20294394 20294399 13 113 5.5 4.0 4.8 2.2 118 chr2L 20294281 intergenic CG12617 + chr2L 20294340 intergenic CG12617 + chr2L 20294399 intergenic CG12617 + chr2L_13_20290001 chr2L_20290001 RAL-822 528 chr2L 20296493 20296512 chr2L 20296599 20296628 6 112 0.5 4.0 2.2 1.9 135 chr2L 20296493 intergenic CR43414 - chr2L 20296560 intergenic CR43414 - chr2L 20296628 intergenic CR43414 - chr2L_6_20295001 chr2L_20295001 RAL-822 529 chr2L 20296513 20296541 chr2L 20296592 20296620 5 101 0.5 3.5 2.0 1.7 107 chr2L 20296513 intergenic CR43414 - chr2L 20296566 intergenic CR43414 - chr2L 20296620 intergenic CR43414 - chr2L_5_20295001 chr2L_20295001 RAL-822 530 chr2L 20310846 20310918 chr2L 20310960 20311032 13 107 1.0 4.0 2.5 3.7 186 chr2L 20310846 intergenic spir + chr2L 20310939 intergenic spir + chr2L 20311032 intergenic spir + chr2L_13_20310001 chr2L_20310001 RAL-822 531 chr2L 20322646 20322667 chr2L 20322717 20322726 5 84 4.0 6.5 5.2 0.8 80 chr2L 20322646 intron spir + chr2L 20322686 intron spir + chr2L 20322726 intron spir + chr2L_5_20320001 chr2L_20320001 RAL-822 532 chr2L 20372189 20372224 chr2L 20372474 20372509 pogo 18 283 6.5 4.5 5.5 2.8 320 chr2L 20372189 intergenic Ugt37a1 - chr2L 20372349 intergenic Ugt37a1 - chr2L 20372509 exon Ugt37a1 - chr2L_18_20370001 chr2L_20370001 RAL-822 533 chr2L 20379065 20379093 chr2L 20379188 20379212 9 120 4.0 2.5 3.2 2.1 147 chr2L 20379065 intron CG16798 - chr2L 20379138 intron CG16798 - chr2L 20379212 intron CG16798 - chr2L_9_20375001 chr2L_20375001 RAL-822 534 chr2L 20498655 20498707 chr2L 20498789 20498841 14 128 1.5 2.5 2.0 4.7 186 chr2L 20498655 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498841 intergenic not near genes chr2L_14_20495001 chr2L_20495001 RAL-822 535 chr2L 20568632 20568666 chr2L 20569057 20569090 X-element 9 423 4.0 1.5 2.8 2.4 458 chr2L 20568632 intron CR45347 + chr2L 20568861 intron CR45347 + chr2L 20569090 intron CR45347 + chr2L_9_20565001 chr2L_20565001 RAL-822 536 chr2L 20576201 20576252 chr2L 20583694 20583719 blood 11 7485 8.5 2.0 5.2 1.8 7518 chr2L 20576201 intergenic CR45347 + chr2L 20579960 intergenic not near genes chr2L 20583719 3` UTR CR44909 - chr2L_11_20575001 chr2L_20575001 RAL-822 537 chr2L 20626100 20626129 chr2L 20626211 20626270 16 128 2.0 7.5 4.8 2.8 170 chr2L 20626100 3` UTR CR44909 - chr2L 20626185 3` UTR CR44909 - chr2L 20626270 intergenic CR44909 - chr2L_16_20625001 chr2L_20625001 RAL-822 538 chr2L 20668656 20668710 chr2L 20668767 20668821 15 108 7.0 4.5 5.8 2.2 165 chr2L 20668656 intron CG31678 - chr2L 20668738 intron CG31678 - chr2L 20668821 intron CG31678 - chr2L_15_20665001 chr2L_20665001 RAL-822 539 chr2L 20674800 20674862 chr2L 20674916 20674974 4 112 2.5 0.0 1.2 1.8 174 chr2L 20674800 intron CG31678 - chr2L 20674887 intron CG31678 - chr2L 20674974 intron CG31678 - chr2L_4_20670001 chr2L_20670001 RAL-822 540 chr2L 20794907 20794933 chr2L 20795072 20795117 7 175 0.5 3.5 2.0 2.3 210 chr2L 20794907 intron,5` UTR vari -,CR44146 + chr2L 20795012 intron,5` UTR vari -,CR44146 + chr2L 20795117 intron,5` UTR vari -,CR44146 + chr2L_7_20795001 chr2L_20795001 RAL-822 541 chr2L 20818478 20818541 chr2L 20818591 20818647 13 105 1.5 5.5 3.5 2.9 169 chr2L 20818478 exon CheB38a - chr2L 20818562 intergenic CheB38a - chr2L 20818647 intergenic CheB38a - chr2L_13_20815001 chr2L_20815001 RAL-822 542 chr2L 20835781 20835811 chr2L 20836533 20836563 Quasimodo 9 751 9.5 4.0 6.8 1.2 782 chr2L 20835781 5` UTR Oseg5 - chr2L 20836172 intergenic Oseg5 -,Spn38F - chr2L 20836563 intergenic Spn38F - chr2L_9_20835001 chr2L_20835001 RAL-822 543 chr2L 20835815 20835831 chr2L 20836532 20836578 Quasimodo 7 739 6.0 4.0 5.0 1.2 763 chr2L 20835815 5` UTR Oseg5 - chr2L 20836196 intergenic Oseg5 -,Spn38F - chr2L 20836578 intergenic Spn38F - chr2L_7_20835001 chr2L_20835001 RAL-822 544 chr2L 20891509 20891537 chr2L 20896644 20896673 jockey 6 5130 3.5 3.5 3.5 1.3 5164 chr2L 20891509 intron,intron CG43739 -,sky - chr2L 20894091 intron,intron CG43739 -,sky - chr2L 20896673 intron,intron CG43739 -,sky - chr2L_6_20890001 chr2L_20890001 RAL-822 545 chr2L 20891539 20891543 chr2L 20896635 20896662 jockey 4 5114 3.0 3.0 3.0 1.0 5123 chr2L 20891539 intron,intron CG43739 -,sky - chr2L 20894100 intron,intron CG43739 -,sky - chr2L 20896662 intron,intron CG43739 -,sky - chr2L_4_20890001 chr2L_20890001 RAL-822 546 chr2L 20901472 20901486 chr2L 20902622 20902640 1360 4 1165 0.0 0.0 0.0 4.0 1168 chr2L 20901472 intron,intron CG43739 -,sky - chr2L 20902056 intron,intron CG43739 -,sky - chr2L 20902640 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-822 547 chr2L 20967063 20967108 chr2L 20967169 20967214 9 110 2.0 2.0 2.0 3.0 151 chr2L 20967063 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967214 3` UTR CG42238 - chr2L_9_20965001 chr2L_20965001 RAL-822 548 chr2L 20976622 20976679 chr2L 20981472 20981497 X-element 10 4840 5.0 9.0 7.0 1.2 4875 chr2L 20976622 intron CG42238 - chr2L 20979060 intron CG42238 - chr2L 20981497 intron CG42238 - chr2L_10_20975001 chr2L_20975001 RAL-822 549 chr2L 20984730 20984762 chr2L 20984857 20984862 5 112 5.0 8.0 6.5 0.7 132 chr2L 20984730 intron CG42238 - chr2L 20984796 intron CG42238 - chr2L 20984862 intron CG42238 - chr2L_5_20980001 chr2L_20980001 RAL-822 550 chr2L 20984764 20984768 chr2L 20984830 20984895 4 100 4.0 4.5 4.2 0.8 131 chr2L 20984764 intron CG42238 - chr2L 20984830 intron CG42238 - chr2L 20984895 intron CG42238 - chr2L_4_20980001 chr2L_20980001 RAL-822 551 chr2L 20986873 20986933 chr2L 20987245 20987277 9 364 2.0 3.0 2.5 2.6 404 chr2L 20986873 intron CG42238 - chr2L 20987075 intron CG42238 - chr2L 20987277 intron CG42238 - chr2L_9_20985001 chr2L_20985001 RAL-822 552 chr2L 20991023 20991033 chr2L 20991130 20991144 5 109 7.0 4.5 5.8 0.7 121 chr2L 20991023 intron CG42238 - chr2L 20991084 intron CG42238 - chr2L 20991144 intron CG42238 - chr2L_5_20990001 chr2L_20990001 RAL-822 553 chr2L 20991034 20991061 chr2L 20991128 20991164 10 101 4.0 4.5 4.2 1.9 130 chr2L 20991034 intron CG42238 - chr2L 20991099 intron CG42238 - chr2L 20991164 intron CG42238 - chr2L_10_20990001 chr2L_20990001 RAL-822 554 chr2L 21074901 21074917 chr2L 21075012 21075043 7 118 3.0 2.0 2.5 2.0 142 chr2L 21074901 intergenic not near genes chr2L 21074972 intergenic tadr + chr2L 21075043 intergenic tadr + chr2L_7_21070001 chr2L_21070001 RAL-822 555 chr2L 21074920 21074951 chr2L 21075040 21075072 12 121 3.0 5.5 4.2 2.3 152 chr2L 21074920 intergenic tadr + chr2L 21074996 intergenic tadr + chr2L 21075072 intergenic tadr + chr2L_12_21070001 chr2L_21070001 RAL-822 556 chr2L 21113656 21113717 chr2L 21113778 21113815 24 118 5.5 4.0 4.8 4.1 159 chr2L 21113656 intron Nhe2 + chr2L 21113736 intron Nhe2 + chr2L 21113815 intron Nhe2 + chr2L_24_21110001 chr2L_21110001 RAL-822 557 chr2L 21119262 21119313 chr2L 21119366 21119426 13 114 8.5 5.0 6.8 1.7 164 chr2L 21119262 intron Nhe2 + chr2L 21119344 intron Nhe2 + chr2L 21119426 intron Nhe2 + chr2L_13_21115001 chr2L_21115001 RAL-822 558 chr2L 21124526 21124558 chr2L 21124622 21124679 15 112 8.0 9.5 8.8 1.5 153 chr2L 21124526 intron Nhe2 + chr2L 21124602 intron Nhe2 + chr2L 21124679 intron Nhe2 + chr2L_15_21120001 chr2L_21120001 RAL-822 559 chr2L 21133256 21133296 chr2L 21133347 21133357 5 94 5.5 4.5 5.0 0.8 101 chr2L 21133256 intergenic Nhe2 + chr2L 21133306 intergenic Nhe2 + chr2L 21133357 intergenic Nhe2 + chr2L_5_21130001 chr2L_21130001 RAL-822 560 chr2L 21233954 21233974 chr2L 21234074 21234106 9 128 6.0 5.5 5.8 1.3 152 chr2L 21233954 intron,5` UTR CG31626 -,CR45713 + chr2L 21234030 intron,5` UTR CG31626 -,CR45713 + chr2L 21234106 intron CG31626 - chr2L_9_21230001 chr2L_21230001 RAL-822 561 chr2L 21233975 21233983 chr2L 21234067 21234103 7 117 4.0 5.0 4.5 1.3 128 chr2L 21233975 intron,5` UTR CG31626 -,CR45713 + chr2L 21234039 intron CG31626 - chr2L 21234103 intron CG31626 - chr2L_7_21230001 chr2L_21230001 RAL-822 562 chr2L 21286583 21286627 chr2L 21286681 21286740 16 109 6.0 5.0 5.5 2.5 157 chr2L 21286583 exon Mio - chr2L 21286662 intron Mio - chr2L 21286740 intron Mio - chr2L_16_21285001 chr2L_21285001 RAL-822 563 chr2L 21345039 21345058 chr2L 21345107 21345119 4 76 2.5 1.0 1.8 1.4 80 chr2L 21345039 intron Tsp39D + chr2L 21345079 intron Tsp39D + chr2L 21345119 intron Tsp39D + chr2L_4_21345001 chr2L_21345001 RAL-822 564 chr2L 21347528 21347583 chr2L 21355026 21355079 blood 16 7502 3.0 1.5 2.2 5.0 7551 chr2L 21347528 intron Tsp39D + chr2L 21351304 intron Tsp39D + chr2L 21355079 intron Tsp39D + chr2L_16_21350001 chr2L_21350001 RAL-822 565 chr2L 21666696 21666758 chr2L 21666816 21666867 4 108 2.5 3.5 3.0 1.0 171 chr2L 21666696 intron CG2225 - chr2L 21666782 intron CG2225 - chr2L 21666867 intron CG2225 - chr2L_4_21665001 chr2L_21665001 RAL-822 566 chr2L 21691810 21691860 chr2L 21698298 21698363 Burdock 19 6488 6.5 3.0 4.8 3.3 6553 chr2L 21691810 intron CG31619 + chr2L 21695086 intron CG31619 + chr2L 21698363 intron CG31619 + chr2L_19_21695001 chr2L_21695001 RAL-822 567 chr2L 21745212 21745276 chr2L 21745337 21745390 17 118 2.0 2.5 2.2 5.3 178 chr2L 21745212 intron step - chr2L 21745301 intron step - chr2L 21745390 intron step - chr2L_17_21745001 chr2L_21745001 RAL-822 568 chr2L 21794456 21794503 chr2L 21794553 21794565 11 96 4.0 2.0 3.0 2.8 109 chr2L 21794456 intron CG31612 - chr2L 21794510 intron CG31612 - chr2L 21794565 intron CG31612 - chr2L_11_21790001 chr2L_21790001 RAL-822 569 chr2L 21799959 21799971 chr2L 21800057 21800057 10 102 4.0 6.5 5.2 1.6 98 chr2L 21799959 intergenic not near genes chr2L 21800008 intergenic not near genes chr2L 21800057 intergenic not near genes chr2L_10_21800001 chr2L_21800001 RAL-822 570 chr2L 21806207 21806255 chr2L 21806330 21806393 19 121 6.5 3.5 5.0 3.2 186 chr2L 21806207 intergenic not near genes chr2L 21806300 intergenic not near genes chr2L 21806393 intergenic not near genes chr2L_19_21805001 chr2L_21805001 RAL-822 571 chr2L 21825110 21825180 chr2L 21825579 21825602 15 457 1.5 3.0 2.2 4.7 492 chr2L 21825110 intergenic not near genes chr2L 21825356 intergenic not near genes chr2L 21825602 intergenic not near genes chr2L_15_21825001 chr2L_21825001 RAL-822 572 chr2L 21864686 21864727 chr2L 21864790 21864830 7 91 1.5 2.5 2.0 2.3 144 chr2L 21864686 intron CR44917 + chr2L 21864758 intron CR44917 + chr2L 21864830 intron CR44917 + chr2L_7_21860001 chr2L_21860001 RAL-822 573 chr2L 21886606 21886636 chr2L 21886700 21886738 5 95 4.5 2.0 3.2 1.2 132 chr2L 21886606 intergenic not near genes chr2L 21886672 intergenic not near genes chr2L 21886738 intergenic not near genes chr2L_5_21885001 chr2L_21885001 RAL-822 574 chr2L 21895706 21895743 chr2L 21895818 21895834 6 98 3.5 1.0 2.2 1.9 128 chr2L 21895706 intergenic CR43762 + chr2L 21895770 intergenic CR43762 + chr2L 21895834 intergenic CR43762 + chr2L_6_21895001 chr2L_21895001 RAL-822 575 chr2L 21926757 21926794 chr2L 21926847 21926881 5 94 3.0 1.0 2.0 1.7 124 chr2L 21926757 intergenic not near genes chr2L 21926819 intergenic not near genes chr2L 21926881 intergenic not near genes chr2L_5_21925001 chr2L_21925001 RAL-822 576 chr2L 21929047 21929062 chr2L 21929184 21929184 5 134 5.5 6.5 6.0 0.7 137 chr2L 21929047 intergenic not near genes chr2L 21929116 intergenic not near genes chr2L 21929184 intergenic not near genes chr2L_5_21925001 chr2L_21925001 RAL-822 577 chr2L 21981658 21981704 chr2L 21990857 21990857 roo 10 9185 3.5 3.5 3.5 2.2 9199 chr2L 21981658 exon CG2528 - chr2L 21986258 intron CG2528 - chr2L 21990857 exon CG2528 - chr2L_10_21985001 chr2L_21985001 RAL-822 578 chr2L 21996915 21996924 chr2L 21997031 21997040 4 116 13.5 4.0 8.8 0.4 125 chr2L 21996915 intergenic not near genes chr2L 21996978 intergenic not near genes chr2L 21997040 intergenic not near genes chr2L_4_21995001 chr2L_21995001 RAL-822 579 chr2L 21996926 21996948 chr2L 21997026 21997054 8 110 9.0 3.5 6.2 1.1 128 chr2L 21996926 intergenic not near genes chr2L 21996990 intergenic not near genes chr2L 21997054 intergenic not near genes chr2L_8_21995001 chr2L_21995001 RAL-822 580 chr2L 21996949 21996973 chr2L 21997023 21997082 7 104 5.5 3.0 4.2 1.3 133 chr2L 21996949 intergenic not near genes chr2L 21997016 intergenic not near genes chr2L 21997082 intergenic not near genes chr2L_7_21995001 chr2L_21995001 RAL-822 581 chr2L 22047225 22047250 chr2L 22047384 22047400 4 154 7.0 5.5 6.2 0.6 175 chr2L 22047225 intergenic not near genes chr2L 22047312 intergenic not near genes chr2L 22047400 intergenic not near genes chr2L_4_22045001 chr2L_22045001 RAL-822 582 chr2L 22165485 22165542 chr2L 22165605 22165646 18 115 6.5 7.5 7.0 2.2 161 chr2L 22165485 3` UTR CG42748 + chr2L 22165566 3` UTR CG42748 + chr2L 22165646 3` UTR CG42748 + chr2L_18_22165001 chr2L_22165001 RAL-822 583 chr2L 22558121 22558152 chr2L 22558226 22558251 4 105 6.0 5.0 5.5 0.6 130 chr2L 22558121 intergenic not near genes chr2L 22558186 intergenic not near genes chr2L 22558251 intergenic not near genes chr2L_4_22555001 chr2L_22555001 RAL-822 584 chr2L 22558171 22558171 chr2L 22558212 22558258 4 60 3.0 5.5 4.2 0.8 87 chr2L 22558171 intergenic not near genes chr2L 22558214 intergenic not near genes chr2L 22558258 intergenic not near genes chr2L_4_22555001 chr2L_22555001 RAL-822 585 chr2L 22558356 22558415 chr2L 22558702 22558735 13 334 2.5 4.0 3.2 3.1 379 chr2L 22558356 intergenic not near genes chr2L 22558546 intergenic not near genes chr2L 22558735 intergenic not near genes chr2L_13_22555001 chr2L_22555001 RAL-822 586 chr2L 22581938 22581988 chr2L 22583762 22583787 S-element 16 1820 6.0 4.0 5.0 2.7 1849 chr2L 22581938 intron CG17494 + chr2L 22582862 intron CG17494 + chr2L 22583787 intron CG17494 + chr2L_16_22580001 chr2L_22580001 RAL-822 587 chr2L 22719419 22719465 chr2L 22727564 22727621 gypsy2 5 8150 4.0 1.0 2.5 1.4 8202 chr2L 22719419 intron CG40006 - chr2L 22723520 intron CG40006 - chr2L 22727621 intron CG40006 - chr2L_5_22720001 chr2L_22720001 RAL-822 588 chr2L 22776396 22776449 chr2L 22778210 22778273 S-element 16 1821 6.0 4.0 5.0 2.7 1877 chr2L 22776396 intergenic not near genes chr2L 22777334 intergenic not near genes chr2L 22778273 intergenic not near genes chr2L_16_22775001 chr2L_22775001 RAL-822 589 chr2L 22941232 22941275 chr2L 22941339 22941352 19 108 4.5 3.5 4.0 3.8 120 chr2L 22941232 3` UTR lt + chr2L 22941292 3` UTR lt + chr2L 22941352 3` UTR lt + chr2L_19_22940001 chr2L_22940001 RAL-822 590 chr2L 23006495 23006532 chr2L 23007185 23007243 Osvaldo 10 694 2.5 4.5 3.5 2.2 748 chr2L 23006495 intron Cht3 - chr2L 23006869 intron Cht3 - chr2L 23007243 intron Cht3 - chr2L_10_23005001 chr2L_23005001 RAL-822 591 chr2R 1082369 1082385 chr2R 1087132 1087168 Doc 5 4771 4.0 3.0 3.5 1.1 4799 chr2R 1082369 intron rl + chr2R 1084768 intron rl + chr2R 1087168 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-822 592 chr2R 1320198 1320201 chr2R 11463556 11463556 invader1 26 10143355 8.5 25.5 17.0 1.4 10143358 chr2R 1320198 intergenic not near genes chr2R 6391877 intergenic not near genes chr2R 11463556 3` UTR E(Pc) + chr2R_26_6390001 chr2R_6390001 RAL-822 593 chr2R 1320204 1320204 chr2R 21358403 21358403 13 20038199 8.5 4.0 6.2 1.8 20038199 chr2R 1320204 intergenic not near genes chr2R 11339304 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_13_11335001 chr2R_11335001 RAL-822 594 chr2R 1516575 1516579 chr2R 1521338 1521342 1731 5 4762 78.0 51.5 64.8 0.1 4767 chr2R 1516575 exon Maf1 - chr2R 1518958 intron Maf1 - chr2R 1521342 5` UTR Maf1 - chr2R_5_1515001 chr2R_1515001 RAL-822 595 chr2R 1516582 1516603 chr2R 1521335 1521366 1731 32 4759 60.5 49.5 55.0 0.6 4784 chr2R 1516582 exon Maf1 - chr2R 1518974 intron Maf1 - chr2R 1521366 5` UTR Maf1 - chr2R_32_1515001 chr2R_1515001 RAL-822 596 chr2R 2498948 2499016 chr2R 2508130 2508183 roo 8 9171 2.5 3.5 3.0 2.0 9235 chr2R 2498948 intron MFS17 - chr2R 2503566 intron MFS17 - chr2R 2508183 intron MFS17 - chr2R_8_2500001 chr2R_2500001 RAL-822 597 chr2R 2591501 2591566 chr2R 2594212 2594217 roo 5 2681 28.0 13.5 20.8 0.2 2716 chr2R 2591501 intergenic not near genes chr2R 2592859 intergenic not near genes chr2R 2594217 intergenic not near genes chr2R_5_2590001 chr2R_2590001 RAL-822 598 chr2R 3532603 3532636 chr2R 3536074 3536114 Doc 6 3475 4.0 6.0 5.0 1.0 3511 chr2R 3532603 intergenic not near genes chr2R 3534358 intergenic not near genes chr2R 3536114 intergenic not near genes chr2R_6_3530001 chr2R_3530001 RAL-822 599 chr2R 4602828 4602874 chr2R 4603194 4603206 6 370 0.5 4.0 2.2 1.9 378 chr2R 4602828 intron p120ctn + chr2R 4603017 intron p120ctn + chr2R 4603206 intron p120ctn + chr2R_6_4600001 chr2R_4600001 RAL-822 600 chr2R 4688098 4688130 chr2R 4688210 4688248 4 119 0.5 2.5 1.5 1.6 150 chr2R 4688098 intergenic not near genes chr2R 4688173 intergenic not near genes chr2R 4688248 intergenic not near genes chr2R_4_4685001 chr2R_4685001 RAL-822 601 chr2R 4821184 4821234 chr2R 4821305 4821355 13 111 7.0 3.0 5.0 2.2 171 chr2R 4821184 intron CG17528 - chr2R 4821270 intron CG17528 - chr2R 4821355 intron CG17528 - chr2R_13_4820001 chr2R_4820001 RAL-822 602 chr2R 4838838 4838853 chr2R 4840396 4840411 transib2 6 1557 13.5 4.5 9.0 0.6 1573 chr2R 4838838 intergenic not near genes chr2R 4839624 intergenic not near genes chr2R 4840411 intergenic not near genes chr2R_6_4835001 chr2R_4835001 RAL-822 603 chr2R 4838859 4838899 chr2R 4840395 4840433 transib2 11 1548 8.0 4.5 6.2 1.5 1574 chr2R 4838859 intergenic not near genes chr2R 4839646 intergenic not near genes chr2R 4840433 intergenic not near genes chr2R_11_4835001 chr2R_4835001 RAL-822 604 chr2R 4870727 4870740 chr2R 4871258 4871286 R1A1-element 6 532 5.0 2.0 3.5 1.3 559 chr2R 4870727 intergenic not near genes chr2R 4871006 intergenic not near genes chr2R 4871286 intergenic not near genes chr2R_6_4870001 chr2R_4870001 RAL-822 605 chr2R 4956988 4957042 chr2R 4957126 4957160 9 134 4.5 2.5 3.5 2.0 172 chr2R 4956988 intron Ir41a + chr2R 4957074 intron Ir41a + chr2R 4957160 intron Ir41a + chr2R_9_4955001 chr2R_4955001 RAL-822 606 chr2R 5022735 5022749 chr2R 5031536 5031568 4 8810 27.0 21.5 24.2 0.2 8833 chr2R 5022735 intergenic not near genes chr2R 5027152 intergenic not near genes chr2R 5031568 intergenic CR44105 - chr2R_4_5025001 chr2R_5025001 RAL-822 607 chr2R 5075927 5075987 chr2R 5076076 5076114 7 137 30.5 27.0 28.8 0.2 187 chr2R 5075927 intergenic not near genes chr2R 5076020 intergenic not near genes chr2R 5076114 intergenic not near genes chr2R_7_5075001 chr2R_5075001 RAL-822 608 chr2R 5125211 5125276 chr2R 5125564 5125629 9 340 2.5 2.5 2.5 2.6 418 chr2R 5125211 intron gus - chr2R 5125420 intron gus - chr2R 5125629 intron gus - chr2R_9_5125001 chr2R_5125001 RAL-822 609 chr2R 5209764 5209821 chr2R 5210290 5210350 22 516 1.0 7.0 4.0 4.4 586 chr2R 5209764 intron Nipped-A - chr2R 5210057 intron Nipped-A - chr2R 5210350 intron Nipped-A - chr2R_22_5210001 chr2R_5210001 RAL-822 610 chr2R 5303493 5303520 chr2R 5303575 5303643 10 110 16.5 14.0 15.2 0.6 150 chr2R 5303493 intergenic not near genes chr2R 5303568 intergenic not near genes chr2R 5303643 intergenic not near genes chr2R_10_5300001 chr2R_5300001 RAL-822 611 chr2R 5342793 5342857 chr2R 5342925 5342949 15 126 5.0 6.0 5.5 2.3 156 chr2R 5342793 intergenic not near genes chr2R 5342871 intergenic not near genes chr2R 5342949 intergenic not near genes chr2R_15_5340001 chr2R_5340001 RAL-822 612 chr2R 5417983 5418027 chr2R 5420625 5420662 Burdock 18 2658 7.0 5.5 6.2 2.5 2679 chr2R 5417983 intron laccase2 + chr2R 5419322 intron laccase2 + chr2R 5420662 intron laccase2 + chr2R_18_5415001 chr2R_5415001 RAL-822 613 chr2R 5460502 5460547 chr2R 5460630 5460655 4 120 4.5 5.0 4.8 0.7 153 chr2R 5460502 intergenic not near genes chr2R 5460578 intergenic not near genes chr2R 5460655 intergenic not near genes chr2R_4_5460001 chr2R_5460001 RAL-822 614 chr2R 5472414 5472453 chr2R 5472871 5472898 7 450 1.0 2.5 1.8 2.5 484 chr2R 5472414 intron CG30440 - chr2R 5472656 intron CG30440 - chr2R 5472898 intron CG30440 - chr2R_7_5470001 chr2R_5470001 RAL-822 615 chr2R 5476321 5476342 chr2R 5476899 5476915 6 575 12.0 2.0 7.0 0.8 594 chr2R 5476321 intron CG30440 - chr2R 5476618 intron CG30440 - chr2R 5476915 intron CG30440 - chr2R_6_5475001 chr2R_5475001 RAL-822 616 chr2R 5476343 5476375 chr2R 5476898 5476929 7 563 6.5 2.0 4.2 1.3 586 chr2R 5476343 intron CG30440 - chr2R 5476636 intron CG30440 - chr2R 5476929 intron CG30440 - chr2R_7_5475001 chr2R_5475001 RAL-822 617 chr2R 5491650 5491697 chr2R 5491758 5491777 13 102 3.5 3.5 3.5 2.9 127 chr2R 5491650 intron CG30440 - chr2R 5491714 intron CG30440 - chr2R 5491777 intron CG30440 - chr2R_13_5490001 chr2R_5490001 RAL-822 618 chr2R 5674563 5674616 chr2R 5674681 5674710 6 109 3.5 1.5 2.5 1.7 147 chr2R 5674563 intergenic not near genes chr2R 5674636 intergenic not near genes chr2R 5674710 intergenic not near genes chr2R_6_5670001 chr2R_5670001 RAL-822 619 chr2R 5676153 5676177 chr2R 5676265 5676294 6 119 4.0 5.5 4.8 1.0 141 chr2R 5676153 intergenic not near genes chr2R 5676224 intergenic not near genes chr2R 5676294 intergenic scaf - chr2R_6_5675001 chr2R_5675001 RAL-822 620 chr2R 5717024 5717054 chr2R 5717124 5717164 11 106 1.0 2.0 1.5 4.4 140 chr2R 5717024 intron ap - chr2R 5717094 intron ap - chr2R 5717164 intron ap - chr2R_11_5715001 chr2R_5715001 RAL-822 621 chr2R 5721574 5721596 chr2R 5721743 5721765 4 169 3.5 0.5 2.0 1.3 191 chr2R 5721574 intron ap - chr2R 5721670 intron ap - chr2R 5721765 intron ap - chr2R_4_5720001 chr2R_5720001 RAL-822 622 chr2R 5724957 5725023 chr2R 5725222 5725288 17 263 6.0 3.0 4.5 3.1 331 chr2R 5724957 intron ap - chr2R 5725122 intron ap - chr2R 5725288 intron ap - chr2R_17_5725001 chr2R_5725001 RAL-822 623 chr2R 5750426 5750450 chr2R 5750545 5750569 4 120 5.0 6.5 5.8 0.6 143 chr2R 5750426 intergenic not near genes chr2R 5750498 intergenic not near genes chr2R 5750569 intergenic not near genes chr2R_4_5750001 chr2R_5750001 RAL-822 624 chr2R 5760674 5760728 chr2R 5760796 5760840 14 116 6.5 4.5 5.5 2.2 166 chr2R 5760674 intergenic Gp210 +,CG7791 - chr2R 5760757 intergenic Gp210 +,CG7791 - chr2R 5760840 intergenic Gp210 +,CG7791 - chr2R_14_5760001 chr2R_5760001 RAL-822 625 chr2R 5790428 5790441 chr2R 5790548 5790552 7 119 18.0 3.5 10.8 0.6 124 chr2R 5790428 intergenic not near genes chr2R 5790490 intergenic not near genes chr2R 5790552 intergenic not near genes chr2R_7_5790001 chr2R_5790001 RAL-822 626 chr2R 5790449 5790492 chr2R 5790547 5790612 12 114 8.5 3.5 6.0 1.7 163 chr2R 5790449 intergenic not near genes chr2R 5790530 intergenic not near genes chr2R 5790612 intergenic not near genes chr2R_12_5790001 chr2R_5790001 RAL-822 627 chr2R 5833355 5833356 chr2R 11463556 11463556 20 5630200 8.5 25.5 17.0 1.1 5630201 chr2R 5833355 intron dpr12 + chr2R 8648456 intergenic not near genes chr2R 11463556 3` UTR E(Pc) + chr2R_20_8645001 chr2R_8645001 RAL-822 628 chr2R 5869258 5869306 chr2R 5874357 5874390 flea 15 5101 4.5 5.0 4.8 2.6 5132 chr2R 5869258 intergenic not near genes chr2R 5871824 intergenic not near genes chr2R 5874390 intergenic not near genes chr2R_15_5870001 chr2R_5870001 RAL-822 629 chr2R 5878898 5878911 chr2R 5879012 5879024 4 113 14.5 7.0 10.8 0.3 126 chr2R 5878898 intergenic CG44438 - chr2R 5878961 intergenic CG44438 - chr2R 5879024 intergenic CG44438 - chr2R_4_5875001 chr2R_5875001 RAL-822 630 chr2R 5878935 5878958 chr2R 5879003 5879070 5 102 7.0 3.5 5.2 0.8 135 chr2R 5878935 intergenic CG44438 - chr2R 5879002 intergenic CG44438 - chr2R 5879070 intergenic CG44438 - chr2R_5_5875001 chr2R_5875001 RAL-822 631 chr2R 5902133 5902189 chr2R 5909718 5909777 17.6 11 7589 6.0 2.5 4.2 2.1 7644 chr2R 5902133 intron CG43366 + chr2R 5905955 intron CG43366 + chr2R 5909777 intron CG43366 + chr2R_11_5905001 chr2R_5905001 RAL-822 632 chr2R 5933783 5933825 chr2R 5933877 5933933 9 104 4.0 2.5 3.2 2.1 150 chr2R 5933783 intergenic not near genes chr2R 5933858 intergenic not near genes chr2R 5933933 intergenic not near genes chr2R_9_5930001 chr2R_5930001 RAL-822 633 chr2R 5945778 5945827 chr2R 5945899 5945955 10 121 4.0 3.0 3.5 2.2 177 chr2R 5945778 intergenic not near genes chr2R 5945866 intergenic not near genes chr2R 5945955 intergenic not near genes chr2R_10_5945001 chr2R_5945001 RAL-822 634 chr2R 6017561 6017603 chr2R 6020919 6020969 4 3356 20.5 19.5 20.0 0.2 3408 chr2R 6017561 intergenic Pngl + chr2R 6019265 intron Pngl + chr2R 6020969 3` UTR dream - chr2R_4_6015001 chr2R_6015001 RAL-822 635 chr2R 6050274 6050283 chr2R 6050402 6050411 7 128 17.5 0.0 8.8 0.7 137 chr2R 6050274 5` UTR CG34212 - chr2R 6050342 intergenic CG34212 - chr2R 6050411 intergenic CG34212 - chr2R_7_6050001 chr2R_6050001 RAL-822 636 chr2R 6065759 6065777 chr2R 6065865 6065884 4 108 2.5 1.0 1.8 1.4 125 chr2R 6065759 intron CCHa2-R + chr2R 6065822 intron CCHa2-R + chr2R 6065884 exon CCHa2-R + chr2R_4_6065001 chr2R_6065001 RAL-822 637 chr2R 6088349 6088389 chr2R 6088462 6088502 21 119 8.0 5.5 6.8 2.7 153 chr2R 6088349 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088502 intergenic not near genes chr2R_21_6085001 chr2R_6085001 RAL-822 638 chr2R 6173515 6173566 chr2R 6173628 6173646 11 103 6.0 4.5 5.2 1.8 131 chr2R 6173515 intergenic Cyp6w1 + chr2R 6173580 intergenic Cyp6w1 + chr2R 6173646 intergenic Cyp6w1 + chr2R_11_6170001 chr2R_6170001 RAL-822 639 chr2R 6177918 6177979 chr2R 6178131 6178180 19 208 1.5 3.0 2.2 5.9 262 chr2R 6177918 intergenic not near genes chr2R 6178049 intergenic not near genes chr2R 6178180 intergenic not near genes chr2R_19_6175001 chr2R_6175001 RAL-822 640 chr2R 6194653 6194691 chr2R 6194771 6194809 4 115 9.5 2.5 6.0 0.6 156 chr2R 6194653 intron Ptr - chr2R 6194731 intron Ptr - chr2R 6194809 intron Ptr - chr2R_4_6190001 chr2R_6190001 RAL-822 641 chr2R 6247790 6247837 chr2R 6247887 6247938 13 98 6.0 5.5 5.8 1.9 148 chr2R 6247790 intron Pld + chr2R 6247864 intron Pld + chr2R 6247938 intron Pld + chr2R_13_6245001 chr2R_6245001 RAL-822 642 chr2R 6494510 6494549 chr2R 6499291 6499343 F-element 8 4786 2.0 4.0 3.0 2.0 4833 chr2R 6494510 intergenic not near genes chr2R 6496926 intergenic not near genes chr2R 6499343 intergenic not near genes chr2R_8_6495001 chr2R_6495001 RAL-822 643 chr2R 6518057 6518107 chr2R 6518161 6518227 14 109 0.5 3.5 2.0 4.7 170 chr2R 6518057 intron jing + chr2R 6518142 intron jing + chr2R 6518227 intron jing + chr2R_14_6515001 chr2R_6515001 RAL-822 644 chr2R 6526106 6526156 chr2R 6526278 6526279 4 143 9.0 4.5 6.8 0.5 173 chr2R 6526106 intron jing + chr2R 6526192 intron jing + chr2R 6526279 intron jing + chr2R_4_6525001 chr2R_6525001 RAL-822 645 chr2R 6579737 6579803 chr2R 6584858 6584894 flea 14 5118 3.5 5.5 4.5 2.5 5157 chr2R 6579737 intron jing + chr2R 6582316 intron jing + chr2R 6584894 intron jing + chr2R_14_6580001 chr2R_6580001 RAL-822 646 chr2R 6597855 6597895 chr2R 6597963 6597971 9 107 5.0 5.0 5.0 1.5 116 chr2R 6597855 intron jing + chr2R 6597913 intron jing + chr2R 6597971 intron jing + chr2R_9_6595001 chr2R_6595001 RAL-822 647 chr2R 6607907 6607955 chr2R 6608035 6608091 15 126 4.5 7.0 5.8 2.2 184 chr2R 6607907 intron jing + chr2R 6607999 intron jing + chr2R 6608091 intron jing + chr2R_15_6605001 chr2R_6605001 RAL-822 648 chr2R 6952167 6952185 chr2R 6959767 6959795 opus 8 7612 5.0 5.0 5.0 1.3 7628 chr2R 6952167 intron,intron mim -,CheB42c - chr2R 6955981 intron,intron mim -,CheB42c - chr2R 6959795 intron,intron mim -,CheB42c - chr2R_8_6955001 chr2R_6955001 RAL-822 649 chr2R 7091181 7091240 chr2R 7091298 7091345 21 114 5.5 6.0 5.8 3.1 164 chr2R 7091181 intron esn + chr2R 7091263 intron esn + chr2R 7091345 intron esn + chr2R_21_7090001 chr2R_7090001 RAL-822 650 chr2R 7101609 7101644 chr2R 7101708 7101774 13 109 2.0 2.5 2.2 4.1 165 chr2R 7101609 intron esn + chr2R 7101692 intron esn + chr2R 7101774 intron esn + chr2R_13_7100001 chr2R_7100001 RAL-822 651 chr2R 7164075 7164125 chr2R 7164244 7164294 15 169 5.0 4.0 4.5 2.7 219 chr2R 7164075 intron pk + chr2R 7164184 intron pk + chr2R 7164294 intron pk + chr2R_15_7160001 chr2R_7160001 RAL-822 652 chr2R 7175494 7175510 chr2R 7175583 7175620 4 94 3.5 1.5 2.5 1.1 126 chr2R 7175494 intron pk + chr2R 7175557 intron pk + chr2R 7175620 intron pk + chr2R_4_7175001 chr2R_7175001 RAL-822 653 chr2R 7175511 7175529 chr2R 7175580 7175631 7 87 1.0 1.5 1.2 3.2 120 chr2R 7175511 intron pk + chr2R 7175571 intron pk + chr2R 7175631 intron pk + chr2R_7_7175001 chr2R_7175001 RAL-822 654 chr2R 7196574 7196596 chr2R 7201372 7201400 F-element 7 4801 3.5 10.0 6.8 0.9 4826 chr2R 7196574 intron pk + chr2R 7198987 intron pk + chr2R 7201400 intron pk + chr2R_7_7195001 chr2R_7195001 RAL-822 655 chr2R 7209865 7209872 chr2R 7217634 7217668 roo 7 7786 0.0 5.0 2.5 2.0 7803 chr2R 7209865 intron pk + chr2R 7213766 intron pk + chr2R 7217668 intron pk + chr2R_7_7210001 chr2R_7210001 RAL-822 656 chr2R 7235808 7235829 chr2R 7240910 7240950 jockey 4 5111 9.0 1.0 5.0 0.7 5142 chr2R 7235808 intergenic not near genes chr2R 7238379 intergenic not near genes chr2R 7240950 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-822 657 chr2R 7290177 7290220 chr2R 7290314 7290357 7 136 4.5 8.0 6.2 1.0 180 chr2R 7290177 intron pwn + chr2R 7290267 intron pwn + chr2R 7290357 intron pwn + chr2R_7_7290001 chr2R_7290001 RAL-822 658 chr2R 7328108 7328152 chr2R 7328239 7328298 9 132 4.0 3.0 3.5 2.0 190 chr2R 7328108 intron,intron Dscam1 -,CR45129 + chr2R 7328203 intron,intron Dscam1 -,CR45129 + chr2R 7328298 intron,intron Dscam1 -,CR45129 + chr2R_9_7325001 chr2R_7325001 RAL-822 659 chr2R 7417899 7418167 chr2R 7418002 7418253 21 102 6.0 8.0 7.0 2.6 354 chr2R 7417899 intergenic not near genes chr2R 7418076 intergenic not near genes chr2R 7418253 intergenic not near genes chr2R_21_7415001 chr2R_7415001 RAL-822 660 chr2R 7434865 7434898 chr2R 7439201 7439234 Juan 10 4332 6.0 5.0 5.5 1.5 4369 chr2R 7434865 3` UTR so + chr2R 7437050 intergenic not near genes chr2R 7439234 intergenic not near genes chr2R_10_7435001 chr2R_7435001 RAL-822 661 chr2R 7459249 7459287 chr2R 7459370 7459389 11 116 6.5 3.5 5.0 1.8 140 chr2R 7459249 intergenic Inos -,CG11141 - chr2R 7459319 intergenic CG11141 -,Inos - chr2R 7459389 intergenic CG11141 - chr2R_11_7455001 chr2R_7455001 RAL-822 662 chr2R 7608379 7608430 chr2R 7613616 7613651 I-element 15 5227 6.5 3.0 4.8 2.6 5272 chr2R 7608379 intron CG1358 - chr2R 7611015 intron CG1358 - chr2R 7613651 intron CG1358 - chr2R_15_7610001 chr2R_7610001 RAL-822 663 chr2R 7619019 7619059 chr2R 7619120 7619174 17 111 10.5 10.0 10.2 1.5 155 chr2R 7619019 intron CG1358 - chr2R 7619096 intron CG1358 - chr2R 7619174 intron CG1358 - chr2R_17_7615001 chr2R_7615001 RAL-822 664 chr2R 7623777 7623843 chr2R 7623999 7624054 18 212 6.0 7.5 6.8 2.3 277 chr2R 7623777 intron CG43340 + chr2R 7623916 intron CG43340 + chr2R 7624054 intron CG43340 + chr2R_18_7620001 chr2R_7620001 RAL-822 665 chr2R 7717223 7717280 chr2R 7717462 7717519 17 246 35.5 36.5 36.0 0.5 296 chr2R 7717223 intergenic CG1946 + chr2R 7717371 intergenic not near genes chr2R 7717519 intergenic not near genes chr2R_17_7715001 chr2R_7715001 RAL-822 666 chr2R 7737881 7737889 chr2R 7737990 7737996 6 110 9.5 9.5 9.5 0.6 115 chr2R 7737881 intergenic not near genes chr2R 7737938 intergenic not near genes chr2R 7737996 intergenic not near genes chr2R_6_7735001 chr2R_7735001 RAL-822 667 chr2R 7760270 7760303 chr2R 7760422 7760431 13 145 0.5 5.0 2.8 3.4 161 chr2R 7760270 intron,intron CG30497 -,CG45093 - chr2R 7760350 intron,intron CG30497 -,CG45093 - chr2R 7760431 intron,intron CG30497 -,CG45093 - chr2R_13_7760001 chr2R_7760001 RAL-822 668 chr2R 7815638 7815695 chr2R 7822141 7822190 Burdock 14 6496 4.0 2.5 3.2 3.3 6552 chr2R 7815638 intergenic CG1882 + chr2R 7818914 intergenic not near genes chr2R 7822190 3` UTR cathD - chr2R_14_7815001 chr2R_7815001 RAL-822 669 chr2R 7869176 7869206 chr2R 7873981 7874001 Doc 7 4805 7.0 3.0 5.0 1.2 4825 chr2R 7869176 intron Dgk - chr2R 7871588 intron Dgk - chr2R 7874001 intron Dgk - chr2R_7_7870001 chr2R_7870001 RAL-822 670 chr2R 8026778 8026793 chr2R 8026889 8026904 8 111 12.0 2.0 7.0 1.0 126 chr2R 8026778 intergenic CR45267 + chr2R 8026841 intergenic CR45267 + chr2R 8026904 intergenic CR45267 + chr2R_8_8025001 chr2R_8025001 RAL-822 671 chr2R 8026795 8026832 chr2R 8026886 8026943 10 106 5.0 1.0 3.0 2.5 148 chr2R 8026795 intergenic CR45267 + chr2R 8026869 intergenic CR45267 + chr2R 8026943 intergenic CR45267 + chr2R_10_8025001 chr2R_8025001 RAL-822 672 chr2R 8067030 8067079 chr2R 8067149 8067168 10 109 7.5 4.0 5.8 1.5 138 chr2R 8067030 intron CG17977 - chr2R 8067099 intron CG17977 - chr2R 8067168 exon CG17977 - chr2R_10_8065001 chr2R_8065001 RAL-822 673 chr2R 8076649 8076709 chr2R 8076764 8076824 28 109 8.5 7.5 8.0 3.1 175 chr2R 8076649 intron lig + chr2R 8076736 intron lig + chr2R 8076824 intron lig + chr2R_28_8075001 chr2R_8075001 RAL-822 674 chr2R 8089226 8089283 chr2R 8089347 8089403 10 117 4.5 3.0 3.8 2.1 177 chr2R 8089226 3` UTR sut2 + chr2R 8089314 intergenic sut2 +,sut3 + chr2R 8089403 intergenic sut3 +,sut2 + chr2R_10_8085001 chr2R_8085001 RAL-822 675 chr2R 8155567 8155612 chr2R 8155672 8155705 8 106 3.5 3.0 3.2 1.9 138 chr2R 8155567 intron,intron Lpin -,kermit - chr2R 8155636 intron,intron Lpin -,kermit - chr2R 8155705 intron,intron Lpin -,kermit - chr2R_8_8155001 chr2R_8155001 RAL-822 676 chr2R 8188188 8188221 chr2R 8188308 8188344 7 122 6.0 7.0 6.5 0.9 156 chr2R 8188188 intron LRP1 + chr2R 8188266 intron LRP1 + chr2R 8188344 intron LRP1 + chr2R_7_8185001 chr2R_8185001 RAL-822 677 chr2R 8249548 8249565 chr2R 8249656 8249679 6 111 5.5 0.0 2.8 1.6 131 chr2R 8249548 5` UTR CG44439 - chr2R 8249614 intergenic CG44439 - chr2R 8249679 intergenic CG44439 - chr2R_6_8245001 chr2R_8245001 RAL-822 678 chr2R 8330831 8330889 chr2R 8331350 8331400 roo 13 510 4.5 8.0 6.2 1.8 569 chr2R 8330831 intron pdm3 + chr2R 8331116 intron pdm3 + chr2R 8331400 intron pdm3 + chr2R_13_8330001 chr2R_8330001 RAL-822 679 chr2R 8397331 8397361 chr2R 8397442 8397472 6 111 2.5 3.0 2.8 1.6 141 chr2R 8397331 exon CG2121 - chr2R 8397402 intron CG2121 - chr2R 8397472 intron CG2121 - chr2R_6_8395001 chr2R_8395001 RAL-822 680 chr2R 8398213 8398243 chr2R 8403007 8403014 Doc 4 4787 2.0 4.0 3.0 1.0 4801 chr2R 8398213 intron CG2121 - chr2R 8400614 intron CG2121 - chr2R 8403014 intron CG2121 - chr2R_4_8400001 chr2R_8400001 RAL-822 681 chr2R 8483934 8483988 chr2R 8484045 8484048 8 98 7.0 9.0 8.0 0.9 114 chr2R 8483934 intron mtt - chr2R 8483991 intron mtt - chr2R 8484048 intron mtt - chr2R_8_8480001 chr2R_8480001 RAL-822 682 chr2R 8488901 8488943 chr2R 8488996 8489047 11 94 5.5 7.0 6.2 1.5 146 chr2R 8488901 intron mtt - chr2R 8488974 intron mtt - chr2R 8489047 intron mtt - chr2R_11_8485001 chr2R_8485001 RAL-822 683 chr2R 8489743 8489757 chr2R 8489810 8489863 4 96 5.5 3.5 4.5 0.7 120 chr2R 8489743 intron mtt - chr2R 8489803 intron mtt - chr2R 8489863 intron mtt - chr2R_4_8485001 chr2R_8485001 RAL-822 684 chr2R 8566029 8566066 chr2R 8566983 8567032 1360 12 972 7.0 5.0 6.0 1.7 1003 chr2R 8566029 5` UTR Cyp6a14 - chr2R 8566530 5` UTR Cyp6a14 - chr2R 8567032 5` UTR Cyp6a14 - chr2R_12_8565001 chr2R_8565001 RAL-822 685 chr2R 8568728 8568772 chr2R 8568838 8568889 23 113 10.0 16.0 13.0 1.6 161 chr2R 8568728 intergenic not near genes chr2R 8568808 intergenic not near genes chr2R 8568889 intergenic not near genes chr2R_23_8565001 chr2R_8565001 RAL-822 686 chr2R 8777888 8777946 chr2R 8784127 8784142 diver 8 6222 2.5 2.5 2.5 2.3 6254 chr2R 8777888 intergenic not near genes chr2R 8781015 intergenic not near genes chr2R 8784142 intergenic not near genes chr2R_8_8780001 chr2R_8780001 RAL-822 687 chr2R 8941561 8941594 chr2R 8941670 8941682 7 101 1.5 3.0 2.2 2.2 121 chr2R 8941561 intergenic CR44273 +,CG13748 + chr2R 8941622 5` UTR CR44273 + chr2R 8941682 5` UTR CR44273 + chr2R_7_8940001 chr2R_8940001 RAL-822 688 chr2R 9026809 9026854 chr2R 9026954 9027009 9 150 3.5 8.5 6.0 1.3 200 chr2R 9026809 intron CG8170 - chr2R 9026909 intron CG8170 - chr2R 9027009 intron CG8170 - chr2R_9_9025001 chr2R_9025001 RAL-822 689 chr2R 9031947 9031980 chr2R 9032060 9032072 6 104 8.0 4.5 6.2 0.8 125 chr2R 9031947 intergenic not near genes chr2R 9032010 intergenic not near genes chr2R 9032072 intergenic not near genes chr2R_6_9030001 chr2R_9030001 RAL-822 690 chr2R 9031985 9032009 chr2R 9032055 9032116 8 99 4.0 5.5 4.8 1.4 131 chr2R 9031985 intergenic not near genes chr2R 9032050 intergenic not near genes chr2R 9032116 intergenic not near genes chr2R_8_9030001 chr2R_9030001 RAL-822 691 chr2R 9047389 9047432 chr2R 9047519 9047556 20 125 8.5 5.0 6.8 2.6 167 chr2R 9047389 intron CG13743 - chr2R 9047472 intron CG13743 - chr2R 9047556 intron CG13743 - chr2R_20_9045001 chr2R_9045001 RAL-822 692 chr2R 9055760 9055803 chr2R 9055875 9055897 5 107 7.0 4.0 5.5 0.8 137 chr2R 9055760 intron CG13743 - chr2R 9055828 intron CG13743 - chr2R 9055897 intron CG13743 - chr2R_5_9055001 chr2R_9055001 RAL-822 693 chr2R 9076114 9076150 chr2R 9076225 9076250 4 106 3.5 5.0 4.2 0.8 136 chr2R 9076114 intron ana + chr2R 9076182 intron ana + chr2R 9076250 intron ana + chr2R_4_9075001 chr2R_9075001 RAL-822 694 chr2R 9078448 9078493 chr2R 9078559 9078595 6 106 3.0 3.0 3.0 1.5 147 chr2R 9078448 intergenic CG8083 + chr2R 9078522 intergenic CG8083 + chr2R 9078595 intergenic CG8083 + chr2R_6_9075001 chr2R_9075001 RAL-822 695 chr2R 9085927 9085953 chr2R 9086039 9086059 7 108 10.5 9.0 9.8 0.6 132 chr2R 9085927 intron CG13742 - chr2R 9085993 exon CG13742 - chr2R 9086059 exon CG13742 - chr2R_7_9085001 chr2R_9085001 RAL-822 696 chr2R 9085964 9085985 chr2R 9086033 9086082 8 88 5.0 8.0 6.5 1.1 118 chr2R 9085964 exon CG13742 - chr2R 9086023 exon CG13742 - chr2R 9086082 exon CG13742 - chr2R_8_9085001 chr2R_9085001 RAL-822 697 chr2R 9151280 9151321 chr2R 9157784 9157820 Burdock 7 6499 5.5 3.5 4.5 1.3 6540 chr2R 9151280 exon CG30345 + chr2R 9154550 intergenic not near genes chr2R 9157820 intergenic CG8008 - chr2R_7_9150001 chr2R_9150001 RAL-822 698 chr2R 9161944 9162007 chr2R 9162064 9162084 18 109 5.0 2.5 3.8 3.8 140 chr2R 9161944 5` UTR CR44283 + chr2R 9162014 intergenic CR44283 +,CG8046 - chr2R 9162084 3` UTR CG8046 - chr2R_18_9160001 chr2R_9160001 RAL-822 699 chr2R 9183145 9183162 chr2R 9183259 9183273 4 109 2.5 14.0 8.2 0.4 128 chr2R 9183145 intron ltd - chr2R 9183209 intron ltd - chr2R 9183273 intron ltd - chr2R_4_9180001 chr2R_9180001 RAL-822 700 chr2R 9212672 9212705 chr2R 9213183 9213201 roo 4 499 5.0 1.5 3.2 1.0 529 chr2R 9212672 intergenic CR45309 + chr2R 9212936 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-822 701 chr2R 9216225 9216279 chr2R 9216367 9216388 5 125 0.0 3.5 1.8 1.8 163 chr2R 9216225 intergenic not near genes chr2R 9216306 intergenic not near genes chr2R 9216388 intergenic not near genes chr2R_5_9215001 chr2R_9215001 RAL-822 702 chr2R 9368114 9368152 chr2R 9368208 9368239 7 85 3.0 0.0 1.5 2.8 125 chr2R 9368114 intron CG13954 - chr2R 9368176 intron CG13954 - chr2R 9368239 intron CG13954 - chr2R_7_9365001 chr2R_9365001 RAL-822 703 chr2R 9408200 9408248 chr2R 9408318 9408342 12 111 2.0 10.5 6.2 1.7 142 chr2R 9408200 intron wun - chr2R 9408271 intron wun - chr2R 9408342 intron wun - chr2R_12_9405001 chr2R_9405001 RAL-822 704 chr2R 9480062 9480099 chr2R 9490608 9490650 roo 17 10562 11.5 4.5 8.0 1.9 10588 chr2R 9480062 intergenic not near genes chr2R 9485356 intergenic not near genes chr2R 9490650 intergenic not near genes chr2R_17_9485001 chr2R_9485001 RAL-822 705 chr2R 9669126 9669155 chr2R 9669255 9669266 5 121 10.0 4.5 7.2 0.6 140 chr2R 9669126 intron Mmp2 - chr2R 9669196 intron Mmp2 - chr2R 9669266 intron Mmp2 - chr2R_5_9665001 chr2R_9665001 RAL-822 706 chr2R 9672021 9672085 chr2R 9672162 9672207 12 138 2.0 9.0 5.5 1.8 186 chr2R 9672021 intron Mmp2 - chr2R 9672114 intron Mmp2 - chr2R 9672207 intron Mmp2 - chr2R_12_9670001 chr2R_9670001 RAL-822 707 chr2R 9726586 9726624 chr2R 9734172 9734193 17.6 8 7575 6.0 5.0 5.5 1.2 7607 chr2R 9726586 intron sqa - chr2R 9730390 intron sqa - chr2R 9734193 intron sqa - chr2R_8_9730001 chr2R_9730001 RAL-822 708 chr2R 9726626 9726637 chr2R 9734161 9734223 17.6 6 7568 5.5 4.0 4.8 1.0 7597 chr2R 9726626 intron sqa - chr2R 9730424 intron sqa - chr2R 9734223 intron sqa - chr2R_6_9730001 chr2R_9730001 RAL-822 709 chr2R 9830239 9830296 chr2R 9830357 9830412 4 104 6.0 5.0 5.5 0.6 173 chr2R 9830239 intron hebe - chr2R 9830326 intron hebe - chr2R 9830412 intron hebe - chr2R_4_9830001 chr2R_9830001 RAL-822 710 chr2R 9928391 9928640 chr2R 9928543 9928760 13 134 5.0 4.5 4.8 2.2 369 chr2R 9928391 intron Mef2 - chr2R 9928576 intron Mef2 - chr2R 9928760 intron Mef2 - chr2R_13_9925001 chr2R_9925001 RAL-822 711 chr2R 9935012 9935050 chr2R 9935109 9935167 12 112 5.0 8.5 6.8 1.5 155 chr2R 9935012 intron Mef2 - chr2R 9935090 intron Mef2 - chr2R 9935167 intron Mef2 - chr2R_12_9935001 chr2R_9935001 RAL-822 712 chr2R 9945429 9945466 chr2R 9945643 9945679 BS 5 217 2.5 4.0 3.2 1.2 250 chr2R 9945429 intron Mef2 - chr2R 9945554 intron Mef2 - chr2R 9945679 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-822 713 chr2R 9956036 9956097 chr2R 9956148 9956181 24 107 8.5 6.5 7.5 2.8 145 chr2R 9956036 intron Mef2 - chr2R 9956108 intron Mef2 - chr2R 9956181 intron Mef2 - chr2R_24_9955001 chr2R_9955001 RAL-822 714 chr2R 9998074 9998091 chr2R 9998195 9998209 6 120 3.5 9.5 6.5 0.8 135 chr2R 9998074 intron Pka-R2 - chr2R 9998142 intron Pka-R2 - chr2R 9998209 intron Pka-R2 - chr2R_6_9995001 chr2R_9995001 RAL-822 715 chr2R 10005533 10005582 chr2R 10005655 10005714 14 128 5.5 2.0 3.8 2.9 181 chr2R 10005533 intron Pka-R2 - chr2R 10005624 intron Pka-R2 - chr2R 10005714 intron Pka-R2 - chr2R_14_10005001 chr2R_10005001 RAL-822 716 chr2R 10005860 10005884 chr2R 10007024 10007032 1360 7 1163 4.0 3.0 3.5 1.6 1172 chr2R 10005860 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007032 intron Pka-R2 - chr2R_7_10005001 chr2R_10005001 RAL-822 717 chr2R 10047789 10047825 chr2R 10047907 10047933 5 116 6.0 6.0 6.0 0.7 144 chr2R 10047789 intron oys - chr2R 10047861 intron oys - chr2R 10047933 intron oys - chr2R_5_10045001 chr2R_10045001 RAL-822 718 chr2R 10122724 10122749 chr2R 10122950 10122994 9 237 9.0 4.0 6.5 1.2 270 chr2R 10122724 intergenic Ccs - chr2R 10122859 intergenic Ccs - chr2R 10122994 intergenic Ccs - chr2R_9_10120001 chr2R_10120001 RAL-822 719 chr2R 10132159 10132214 chr2R 10132270 10132307 13 107 4.5 3.0 3.8 2.7 148 chr2R 10132159 exon gem + chr2R 10132233 intron gem + chr2R 10132307 exon gem + chr2R_13_10130001 chr2R_10130001 RAL-822 720 chr2R 10171095 10171142 chr2R 10171198 10171254 9 113 0.0 5.0 2.5 2.6 159 chr2R 10171095 intron KCNQ - chr2R 10171174 intron KCNQ - chr2R 10171254 intron KCNQ - chr2R_9_10170001 chr2R_10170001 RAL-822 721 chr2R 10174483 10174516 chr2R 10174592 10174651 7 128 3.0 4.0 3.5 1.6 168 chr2R 10174483 intron KCNQ - chr2R 10174567 intron KCNQ - chr2R 10174651 intron KCNQ - chr2R_7_10170001 chr2R_10170001 RAL-822 722 chr2R 10176854 10176909 chr2R 10186056 10186111 roo 12 9195 5.5 10.0 7.8 1.4 9257 chr2R 10176854 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186111 intron KCNQ - chr2R_12_10180001 chr2R_10180001 RAL-822 723 chr2R 10274805 10274822 chr2R 10274900 10274933 8 109 9.0 0.5 4.8 1.4 128 chr2R 10274805 intron CAP + chr2R 10274869 intron CAP + chr2R 10274933 intron CAP + chr2R_8_10270001 chr2R_10270001 RAL-822 724 chr2R 10313294 10313318 chr2R 10313417 10313434 8 119 3.0 6.5 4.8 1.4 140 chr2R 10313294 intergenic not near genes chr2R 10313364 intergenic not near genes chr2R 10313434 intergenic Ndg + chr2R_8_10310001 chr2R_10310001 RAL-822 725 chr2R 10313319 10313347 chr2R 10313406 10313460 11 115 2.0 4.5 3.2 2.6 141 chr2R 10313319 intergenic not near genes chr2R 10313390 intergenic Ndg + chr2R 10313460 intergenic Ndg + chr2R_11_10310001 chr2R_10310001 RAL-822 726 chr2R 10354255 10354296 chr2R 10354358 10354410 19 112 4.5 5.5 5.0 3.2 155 chr2R 10354255 intron,3` UTR CG42732 -,CG12907 + chr2R 10354332 intron,3` UTR CG42732 -,CG12907 + chr2R 10354410 intron CG42732 - chr2R_19_10350001 chr2R_10350001 RAL-822 727 chr2R 10363842 10363898 chr2R 10363944 10363982 21 111 5.5 4.0 4.8 3.6 140 chr2R 10363842 intron CG42732 - chr2R 10363912 intron CG42732 - chr2R 10363982 intron CG42732 - chr2R_21_10360001 chr2R_10360001 RAL-822 728 chr2R 10376121 10376139 chr2R 10376505 10376523 5 384 0.0 3.0 1.5 2.0 402 chr2R 10376121 intron CG42732 - chr2R 10376322 intron CG42732 - chr2R 10376523 intron CG42732 - chr2R_5_10375001 chr2R_10375001 RAL-822 729 chr2R 10391295 10391306 chr2R 10396497 10396536 7 5200 21.0 27.0 24.0 0.3 5241 chr2R 10391295 intron CG42732 - chr2R 10393916 intron CG42732 - chr2R 10396536 intron CG42732 - chr2R_7_10390001 chr2R_10390001 RAL-822 730 chr2R 10409025 10409085 chr2R 10409137 10409196 11 106 0.0 6.0 3.0 2.8 171 chr2R 10409025 intron CG42732 - chr2R 10409110 intron CG42732 - chr2R 10409196 intron,exon CG42732 -,CG33477 - chr2R_11_10405001 chr2R_10405001 RAL-822 731 chr2R 10411773 10411820 chr2R 10411890 10411937 15 110 8.0 5.5 6.8 1.9 164 chr2R 10411773 intron CG42732 - chr2R 10411855 intron CG42732 - chr2R 10411937 intron CG42732 - chr2R_15_10410001 chr2R_10410001 RAL-822 732 chr2R 10429034 10429037 chr2R 10429097 10429149 4 84 6.0 5.0 5.5 0.6 115 chr2R 10429034 intergenic not near genes chr2R 10429092 intergenic not near genes chr2R 10429149 intergenic not near genes chr2R_4_10425001 chr2R_10425001 RAL-822 733 chr2R 10429039 10429042 chr2R 10429095 10429098 4 66 5.5 5.0 5.2 0.6 59 chr2R 10429039 intergenic not near genes chr2R 10429068 intergenic not near genes chr2R 10429098 intergenic not near genes chr2R_4_10425001 chr2R_10425001 RAL-822 734 chr2R 10546544 10546548 chr2R 10546660 10546674 4 121 21.5 5.5 13.5 0.3 130 chr2R 10546544 intergenic not near genes chr2R 10546609 intergenic not near genes chr2R 10546674 intergenic not near genes chr2R_4_10545001 chr2R_10545001 RAL-822 735 chr2R 10546553 10546593 chr2R 10546651 10546700 19 116 6.0 4.5 5.2 3.1 147 chr2R 10546553 intergenic not near genes chr2R 10546626 intergenic not near genes chr2R 10546700 intergenic not near genes chr2R_19_10545001 chr2R_10545001 RAL-822 736 chr2R 10562956 10563232 chr2R 10563069 10563358 6 108 0.0 0.0 0.0 6.0 402 chr2R 10562956 intron psq + chr2R 10563157 intron psq + chr2R 10563358 intron psq + chr2R_6_10560001 chr2R_10560001 RAL-822 737 chr2R 10574593 10574641 chr2R 10574710 10574743 7 113 6.0 6.0 6.0 1.0 150 chr2R 10574593 intron psq + chr2R 10574668 intron psq + chr2R 10574743 intron psq + chr2R_7_10570001 chr2R_10570001 RAL-822 738 chr2R 10577428 10577437 chr2R 10577548 10577557 5 118 16.0 4.0 10.0 0.5 129 chr2R 10577428 intron psq + chr2R 10577492 intron psq + chr2R 10577557 intron psq + chr2R_5_10575001 chr2R_10575001 RAL-822 739 chr2R 10577442 10577491 chr2R 10577547 10577611 9 116 6.0 4.0 5.0 1.5 169 chr2R 10577442 intron psq + chr2R 10577526 intron psq + chr2R 10577611 intron psq + chr2R_9_10575001 chr2R_10575001 RAL-822 740 chr2R 10595779 10595814 chr2R 10595872 10595932 4 110 2.0 0.0 1.0 2.0 153 chr2R 10595779 intron psq + chr2R 10595856 intron psq + chr2R 10595932 intron psq + chr2R_4_10595001 chr2R_10595001 RAL-822 741 chr2R 10644023 10644076 chr2R 10644136 10644189 17 109 4.0 0.0 2.0 5.7 166 chr2R 10644023 intron Git - chr2R 10644106 intron Git - chr2R 10644189 intron Git - chr2R_17_10640001 chr2R_10640001 RAL-822 742 chr2R 10658035 10658082 chr2R 10658146 10658207 9 122 5.5 3.0 4.2 1.7 172 chr2R 10658035 intergenic CR44452 - chr2R 10658121 intergenic not near genes chr2R 10658207 intergenic not near genes chr2R_9_10655001 chr2R_10655001 RAL-822 743 chr2R 10693842 10693868 chr2R 10693939 10693974 5 104 4.5 3.5 4.0 1.0 132 chr2R 10693842 intron stan + chr2R 10693908 intron stan + chr2R 10693974 intron stan + chr2R_5_10690001 chr2R_10690001 RAL-822 744 chr2R 10697302 10697342 chr2R 10697406 10697463 8 112 4.0 1.0 2.5 2.3 161 chr2R 10697302 intron stan + chr2R 10697382 intron stan + chr2R 10697463 intron stan + chr2R_8_10695001 chr2R_10695001 RAL-822 745 chr2R 10698072 10698118 chr2R 10698169 10698185 4 82 4.0 2.0 3.0 1.0 113 chr2R 10698072 intron stan + chr2R 10698128 intron stan + chr2R 10698185 intron stan + chr2R_4_10695001 chr2R_10695001 RAL-822 746 chr2R 10771003 10771022 chr2R 10771084 10771138 10 106 2.5 5.0 3.8 2.1 135 chr2R 10771003 intron CG33144 - chr2R 10771070 intron CG33144 - chr2R 10771138 intron CG33144 - chr2R_10_10770001 chr2R_10770001 RAL-822 747 chr2R 10790125 10790158 chr2R 10790233 10790280 14 111 7.5 6.0 6.8 1.8 155 chr2R 10790125 intron CG33144 - chr2R 10790202 intron CG33144 - chr2R 10790280 intron CG33144 - chr2R_14_10790001 chr2R_10790001 RAL-822 748 chr2R 10805762 10805793 chr2R 10805879 10805896 7 116 3.5 8.0 5.8 1.0 134 chr2R 10805762 intron wde - chr2R 10805829 intron wde - chr2R 10805896 intron wde - chr2R_7_10805001 chr2R_10805001 RAL-822 749 chr2R 10827317 10827360 chr2R 10827420 10827471 11 101 4.0 6.5 5.2 1.8 154 chr2R 10827317 exon CG12325 + chr2R 10827394 3` UTR CG12325 + chr2R 10827471 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_11_10825001 chr2R_10825001 RAL-822 750 chr2R 10848293 10848320 chr2R 10848425 10848426 10 125 2.0 2.5 2.2 3.1 133 chr2R 10848293 intron CG30015 - chr2R 10848360 intron CG30015 - chr2R 10848426 intron CG30015 - chr2R_10_10845001 chr2R_10845001 RAL-822 751 chr2R 10860462 10860518 chr2R 10860569 10860634 11 108 3.5 4.5 4.0 2.2 172 chr2R 10860462 intron CG30015 - chr2R 10860548 intron CG30015 - chr2R 10860634 intron CG30015 - chr2R_11_10860001 chr2R_10860001 RAL-822 752 chr2R 10871628 10871674 chr2R 10871735 10871780 8 108 2.5 9.5 6.0 1.1 152 chr2R 10871628 intron CG30015 - chr2R 10871704 intron CG30015 - chr2R 10871780 intron CG30015 - chr2R_8_10870001 chr2R_10870001 RAL-822 753 chr2R 10937799 10937817 chr2R 10937949 10937970 11 166 0.0 5.0 2.5 3.1 171 chr2R 10937799 intergenic not near genes chr2R 10937884 intergenic not near genes chr2R 10937970 intergenic Spn47C - chr2R_11_10935001 chr2R_10935001 RAL-822 754 chr2R 10948035 10948060 chr2R 10955585 10955620 17.6 5 7557 2.0 1.5 1.8 1.8 7585 chr2R 10948035 intergenic not near genes chr2R 10951828 intergenic not near genes chr2R 10955620 intergenic not near genes chr2R_5_10950001 chr2R_10950001 RAL-822 755 chr2R 10959079 10959104 chr2R 10959170 10959195 8 95 0.0 1.5 0.8 4.4 116 chr2R 10959079 intergenic not near genes chr2R 10959137 intergenic not near genes chr2R 10959195 intergenic not near genes chr2R_8_10955001 chr2R_10955001 RAL-822 756 chr2R 10979647 10979684 chr2R 10980130 10980160 297 6 476 1.5 3.0 2.2 1.9 513 chr2R 10979647 intergenic not near genes chr2R 10979904 intergenic not near genes chr2R 10980160 intergenic not near genes chr2R_6_10975001 chr2R_10975001 RAL-822 757 chr2R 10992928 10992978 chr2R 10993038 10993045 4 96 5.0 4.0 4.5 0.7 117 chr2R 10992928 intron luna - chr2R 10992986 intron luna - chr2R 10993045 intron luna - chr2R_4_10990001 chr2R_10990001 RAL-822 758 chr2R 11031928 11031976 chr2R 11032030 11032093 13 112 1.5 6.0 3.8 2.7 165 chr2R 11031928 intron luna - chr2R 11032010 intron luna - chr2R 11032093 intron luna - chr2R_13_11030001 chr2R_11030001 RAL-822 759 chr2R 11032620 11032665 chr2R 11032743 11032761 7 110 6.5 4.5 5.5 1.1 141 chr2R 11032620 intron luna - chr2R 11032690 intron luna - chr2R 11032761 intron luna - chr2R_7_11030001 chr2R_11030001 RAL-822 760 chr2R 11064687 11064734 chr2R 11064788 11064852 15 111 5.5 3.0 4.2 2.9 165 chr2R 11064687 intron luna - chr2R 11064770 intron luna - chr2R 11064852 intron luna - chr2R_15_11060001 chr2R_11060001 RAL-822 761 chr2R 11071528 11071546 chr2R 11071667 11071678 5 136 6.0 1.5 3.8 1.0 150 chr2R 11071528 intron luna - chr2R 11071603 intron luna - chr2R 11071678 intron luna - chr2R_5_11070001 chr2R_11070001 RAL-822 762 chr2R 11071552 11071591 chr2R 11071666 11071706 17 122 1.5 1.5 1.5 6.8 154 chr2R 11071552 intron luna - chr2R 11071629 intron luna - chr2R 11071706 intron luna - chr2R_17_11070001 chr2R_11070001 RAL-822 763 chr2R 11097330 11097385 chr2R 11097463 11097525 10 133 3.5 5.0 4.2 1.9 195 chr2R 11097330 intron luna - chr2R 11097428 intron luna - chr2R 11097525 intron luna - chr2R_10_11095001 chr2R_11095001 RAL-822 764 chr2R 11155811 11155835 chr2R 11155944 11155974 7 133 7.0 4.0 5.5 1.1 163 chr2R 11155811 intron CG13229 - chr2R 11155892 intron CG13229 - chr2R 11155974 intron CG13229 - chr2R_7_11155001 chr2R_11155001 RAL-822 765 chr2R 11179261 11179285 chr2R 11179355 11179371 4 102 4.5 2.0 3.2 1.0 110 chr2R 11179261 intron shn + chr2R 11179316 intron shn + chr2R 11179371 intron shn + chr2R_4_11175001 chr2R_11175001 RAL-822 766 chr2R 11207823 11207841 chr2R 11208007 11208064 BS 7 204 4.5 7.5 6.0 1.0 241 chr2R 11207823 intron shn + chr2R 11207944 intron shn + chr2R 11208064 intron shn + chr2R_7_11205001 chr2R_11205001 RAL-822 767 chr2R 11249139 11249198 chr2R 11249300 11249359 8 149 1.0 0.0 0.5 5.3 220 chr2R 11249139 intergenic CG43112 + chr2R 11249249 intergenic CG43112 + chr2R 11249359 intergenic CG43112 + chr2R_8_11245001 chr2R_11245001 RAL-822 768 chr2R 11276772 11276794 chr2R 11276975 11276996 10 197 4.5 2.5 3.5 2.2 224 chr2R 11276772 intergenic not near genes chr2R 11276884 intergenic not near genes chr2R 11276996 intergenic not near genes chr2R_10_11275001 chr2R_11275001 RAL-822 769 chr2R 11297619 11297641 chr2R 11301952 11301997 flea 8 4351 4.5 11.5 8.0 0.9 4378 chr2R 11297619 intergenic CG42336 - chr2R 11299808 intergenic not near genes chr2R 11301997 5` UTR CG7741 + chr2R_8_11295001 chr2R_11295001 RAL-822 770 chr2R 11415522 11415551 chr2R 11418667 11418690 opus 13 3152 1.0 5.5 3.2 3.1 3168 chr2R 11415522 intron Drip - chr2R 11417106 intron Drip - chr2R 11418690 intron Drip - chr2R_13_11415001 chr2R_11415001 RAL-822 771 chr2R 11436608 11436621 chr2R 11436724 11436756 5 132 0.0 7.5 3.8 1.0 148 chr2R 11436608 intron CG7777 + chr2R 11436682 intron CG7777 + chr2R 11436756 intron CG7777 + chr2R_5_11435001 chr2R_11435001 RAL-822 772 chr2R 11472633 11472677 chr2R 11473848 11473879 pogo 7 1213 4.0 2.5 3.2 1.7 1246 chr2R 11472633 intergenic not near genes chr2R 11473256 intergenic not near genes chr2R 11473879 intergenic not near genes chr2R_7_11470001 chr2R_11470001 RAL-822 773 chr2R 11516935 11516965 chr2R 11517051 11517071 13 110 3.5 0.0 1.8 4.6 136 chr2R 11516935 intergenic not near genes chr2R 11517003 intergenic not near genes chr2R 11517071 intergenic not near genes chr2R_13_11515001 chr2R_11515001 RAL-822 774 chr2R 11518779 11518838 chr2R 11518913 11518980 12 140 1.5 0.0 0.8 6.7 201 chr2R 11518779 intergenic not near genes chr2R 11518880 intergenic not near genes chr2R 11518980 intergenic not near genes chr2R_12_11515001 chr2R_11515001 RAL-822 775 chr2R 11537184 11537248 chr2R 11537291 11537313 17 97 6.0 2.5 4.2 3.3 129 chr2R 11537184 intergenic not near genes chr2R 11537248 intergenic not near genes chr2R 11537313 intergenic not near genes chr2R_17_11535001 chr2R_11535001 RAL-822 776 chr2R 11555381 11555424 chr2R 11555735 11555766 9 364 0.5 4.0 2.2 2.8 385 chr2R 11555381 intergenic not near genes chr2R 11555574 intergenic not near genes chr2R 11555766 intergenic not near genes chr2R_9_11555001 chr2R_11555001 RAL-822 777 chr2R 11631373 11631407 chr2R 11631487 11631511 13 110 0.5 4.5 2.5 3.7 138 chr2R 11631373 intron CG9005 - chr2R 11631442 intron CG9005 - chr2R 11631511 intron CG9005 - chr2R_13_11630001 chr2R_11630001 RAL-822 778 chr2R 11677866 11677886 chr2R 11677978 11677998 4 108 4.0 8.5 6.2 0.6 132 chr2R 11677866 intron,exon Roc2 -,Tret1-2 + chr2R 11677932 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677998 intron,3` UTR Roc2 -,Tret1-2 + chr2R_4_11675001 chr2R_11675001 RAL-822 779 chr2R 11724121 11724184 chr2R 11724239 11724287 14 112 6.0 2.5 4.2 2.7 166 chr2R 11724121 intron pyr + chr2R 11724204 intron pyr + chr2R 11724287 intron pyr + chr2R_14_11720001 chr2R_11720001 RAL-822 780 chr2R 11756172 11756201 chr2R 11756301 11756343 5 135 3.5 6.0 4.8 0.9 171 chr2R 11756172 intergenic not near genes chr2R 11756258 intergenic not near genes chr2R 11756343 intergenic ths + chr2R_5_11755001 chr2R_11755001 RAL-822 781 chr2R 11760716 11760754 chr2R 11760866 11760920 7 157 2.5 5.0 3.8 1.5 204 chr2R 11760716 intron ths + chr2R 11760818 intron ths + chr2R 11760920 intron ths + chr2R_7_11760001 chr2R_11760001 RAL-822 782 chr2R 11945483 11945511 chr2R 11945776 11945793 5 297 2.5 3.0 2.8 1.3 310 chr2R 11945483 intron CG13188 + chr2R 11945638 intron CG13188 + chr2R 11945793 intron CG13188 + chr2R_5_11945001 chr2R_11945001 RAL-822 783 chr2R 12185971 12185992 chr2R 12186101 12186115 13 129 24.5 10.5 17.5 0.7 144 chr2R 12185971 intron Cyp6g1 + chr2R 12186043 intron Cyp6g1 + chr2R 12186115 intron Cyp6g1 + chr2R_13_12185001 chr2R_12185001 RAL-822 784 chr2R 12185994 12186037 chr2R 12186098 12186157 22 116 8.0 9.5 8.8 2.2 163 chr2R 12185994 intron Cyp6g1 + chr2R 12186076 intron Cyp6g1 + chr2R 12186157 intron Cyp6g1 + chr2R_22_12185001 chr2R_12185001 RAL-822 785 chr2R 12187476 12187507 chr2R 12190092 12190124 14 2624 50.0 38.5 44.2 0.3 2648 chr2R 12187476 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_14_12185001 chr2R_12185001 RAL-822 786 chr2R 12285348 12285400 chr2R 12285480 12285522 8 130 4.0 0.0 2.0 2.7 174 chr2R 12285348 intron CG42700 + chr2R 12285435 intron CG42700 + chr2R 12285522 intron CG42700 + chr2R_8_12285001 chr2R_12285001 RAL-822 787 chr2R 12363358 12363406 chr2R 12363815 12363861 19 459 7.0 2.5 4.8 3.3 503 chr2R 12363358 intergenic CG30043 + chr2R 12363610 intergenic CG30043 + chr2R 12363861 intergenic not near genes chr2R_19_12360001 chr2R_12360001 RAL-822 788 chr2R 12377462 12377524 chr2R 12377618 12377671 22 150 6.5 3.5 5.0 3.7 209 chr2R 12377462 intergenic Cpr49Aa + chr2R 12377566 intergenic Cpr49Aa + chr2R 12377671 intergenic Cpr49Aa + chr2R_22_12375001 chr2R_12375001 RAL-822 789 chr2R 12565559 12565595 chr2R 12565943 12565979 10 382 0.0 4.5 2.2 3.1 420 chr2R 12565559 intergenic not near genes chr2R 12565769 intergenic Cyp301a1 + chr2R 12565979 intergenic Cyp301a1 + chr2R_10_12565001 chr2R_12565001 RAL-822 790 chr2R 12625962 12626025 chr2R 12626138 12626201 6 175 0.0 6.0 3.0 1.5 239 chr2R 12625962 5` UTR CG17760 + chr2R 12626082 5` UTR CG17760 + chr2R 12626201 intron CG17760 + chr2R_6_12625001 chr2R_12625001 RAL-822 791 chr2R 12707484 12707543 chr2R 12715885 12715944 roo 9 8396 5.5 3.0 4.2 1.7 8460 chr2R 12707484 intron CG42663 + chr2R 12711714 intron CG42663 + chr2R 12715944 intron CG42663 + chr2R_9_12710001 chr2R_12710001 RAL-822 792 chr2R 12819432 12819473 chr2R 12824536 12824575 jockey 8 5097 2.0 2.5 2.2 2.5 5143 chr2R 12819432 intergenic not near genes chr2R 12822004 intergenic not near genes chr2R 12824575 intergenic not near genes chr2R_8_12820001 chr2R_12820001 RAL-822 793 chr2R 12897433 12897476 chr2R 12897553 12897592 6 121 0.0 0.0 0.0 6.0 159 chr2R 12897433 intron vg + chr2R 12897512 intron vg + chr2R 12897592 intron vg + chr2R_6_12895001 chr2R_12895001 RAL-822 794 chr2R 13136823 13136856 chr2R 13141645 13141664 Doc 7 4822 3.0 2.0 2.5 2.0 4841 chr2R 13136823 exon Cap-G + chr2R 13139244 intron Cap-G + chr2R 13141664 intron Cap-G + chr2R_7_13135001 chr2R_13135001 RAL-822 795 chr2R 13167416 13167461 chr2R 13167534 13167596 11 124 4.0 0.0 2.0 3.7 180 chr2R 13167416 intron GLaz - chr2R 13167506 intron GLaz - chr2R 13167596 intron GLaz - chr2R_11_13165001 chr2R_13165001 RAL-822 796 chr2R 13261121 13261171 chr2R 13261251 13261300 14 124 2.5 11.0 6.8 1.8 179 chr2R 13261121 intron CG42319 + chr2R 13261210 intron CG42319 + chr2R 13261300 intron CG42319 + chr2R_14_13260001 chr2R_13260001 RAL-822 797 chr2R 13300098 13300107 chr2R 13300209 13300225 4 114 3.5 2.0 2.8 1.1 127 chr2R 13300098 intron CG17047 + chr2R 13300162 intron CG17047 + chr2R 13300225 exon CG17047 + chr2R_4_13300001 chr2R_13300001 RAL-822 798 chr2R 13305466 13305508 chr2R 13305583 13305624 4 104 2.5 3.5 3.0 1.0 158 chr2R 13305466 intergenic not near genes chr2R 13305545 intergenic not near genes chr2R 13305624 intergenic not near genes chr2R_4_13305001 chr2R_13305001 RAL-822 799 chr2R 13369630 13369760 chr2R 13369763 13369865 5 110 0.0 0.0 0.0 5.0 235 chr2R 13369630 intergenic not near genes chr2R 13369748 intergenic not near genes chr2R 13369865 intergenic not near genes chr2R_5_13365001 chr2R_13365001 RAL-822 800 chr2R 13431454 13431520 chr2R 13431568 13431613 17 109 4.5 2.0 3.2 4.0 159 chr2R 13431454 intron CG42321 - chr2R 13431534 intron CG42321 - chr2R 13431613 intron CG42321 - chr2R_17_13430001 chr2R_13430001 RAL-822 801 chr2R 13544529 13544547 chr2R 13544640 13544648 6 108 0.5 6.0 3.2 1.4 119 chr2R 13544529 intron CG6145 - chr2R 13544588 intron CG6145 - chr2R 13544648 intron CG6145 - chr2R_6_13540001 chr2R_13540001 RAL-822 802 chr2R 13544548 13544590 chr2R 13544639 13544696 8 96 1.0 6.0 3.5 1.8 148 chr2R 13544548 intron CG6145 - chr2R 13544622 intron CG6145 - chr2R 13544696 intron CG6145 - chr2R_8_13540001 chr2R_13540001 RAL-822 803 chr2R 13547063 13547082 chr2R 13547283 13547302 4 225 2.0 2.5 2.2 1.2 239 chr2R 13547063 intron CG6145 - chr2R 13547182 intron CG6145 - chr2R 13547302 intron CG6145 - chr2R_4_13545001 chr2R_13545001 RAL-822 804 chr2R 13547086 13547108 chr2R 13547276 13547328 5 213 1.0 2.0 1.5 2.0 242 chr2R 13547086 intron CG6145 - chr2R 13547207 intron CG6145 - chr2R 13547328 intron CG6145 - chr2R_5_13545001 chr2R_13545001 RAL-822 805 chr2R 13566242 13566279 chr2R 13566337 13566378 6 98 3.0 0.0 1.5 2.4 136 chr2R 13566242 intergenic not near genes chr2R 13566310 intergenic not near genes chr2R 13566378 intergenic not near genes chr2R_6_13565001 chr2R_13565001 RAL-822 806 chr2R 13632284 13632301 chr2R 13632407 13632414 4 118 10.5 13.0 11.8 0.3 130 chr2R 13632284 intron fas + chr2R 13632349 intron fas + chr2R 13632414 intron fas + chr2R_4_13630001 chr2R_13630001 RAL-822 807 chr2R 13649932 13649988 chr2R 13650117 13650158 10 185 3.0 6.0 4.5 1.8 226 chr2R 13649932 intron fas + chr2R 13650045 intron fas + chr2R 13650158 intron fas + chr2R_10_13650001 chr2R_13650001 RAL-822 808 chr2R 13709823 13709851 chr2R 13709950 13709978 11 126 5.0 0.0 2.5 3.1 155 chr2R 13709823 intron fas + chr2R 13709900 intron fas + chr2R 13709978 intron fas + chr2R_11_13705001 chr2R_13705001 RAL-822 809 chr2R 13728108 13728161 chr2R 13735794 13735843 opus 13 7689 7.0 5.5 6.2 1.8 7735 chr2R 13728108 intron fas + chr2R 13731976 intron fas + chr2R 13735843 intron fas + chr2R_13_13730001 chr2R_13730001 RAL-822 810 chr2R 13738907 13738927 chr2R 13739045 13739065 5 136 1.5 4.5 3.0 1.2 158 chr2R 13738907 intron fas + chr2R 13738986 intron fas + chr2R 13739065 intron fas + chr2R_5_13735001 chr2R_13735001 RAL-822 811 chr2R 13768970 13769009 chr2R 13769104 13769142 6 125 3.0 5.0 4.0 1.2 172 chr2R 13768970 intergenic not near genes chr2R 13769056 intergenic not near genes chr2R 13769142 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-822 812 chr2R 13905584 13905629 chr2R 13907576 13907601 Rt1a 5 1992 0.0 1.5 0.8 2.8 2017 chr2R 13905584 intron shot - chr2R 13906592 intron shot - chr2R 13907601 intron shot - chr2R_5_13905001 chr2R_13905001 RAL-822 813 chr2R 13924437 13924461 chr2R 13924589 13924613 5 150 7.0 1.0 4.0 1.0 176 chr2R 13924437 intron shot - chr2R 13924525 intron shot - chr2R 13924613 intron shot - chr2R_5_13920001 chr2R_13920001 RAL-822 814 chr2R 13925840 13925893 chr2R 13926022 13926077 11 182 5.5 1.0 3.2 2.6 237 chr2R 13925840 intron shot - chr2R 13925958 intron shot - chr2R 13926077 intron shot - chr2R_11_13925001 chr2R_13925001 RAL-822 815 chr2R 14018133 14018150 chr2R 14018252 14018264 7 118 12.0 10.0 11.0 0.6 131 chr2R 14018133 intron mam + chr2R 14018198 intron mam + chr2R 14018264 intron mam + chr2R_7_14015001 chr2R_14015001 RAL-822 816 chr2R 14018152 14018186 chr2R 14018249 14018290 9 114 5.5 8.5 7.0 1.1 138 chr2R 14018152 intron mam + chr2R 14018221 intron mam + chr2R 14018290 intron mam + chr2R_9_14015001 chr2R_14015001 RAL-822 817 chr2R 14037240 14037286 chr2R 14037358 14037403 4 116 1.0 6.5 3.8 0.8 163 chr2R 14037240 intron mam + chr2R 14037322 intron mam + chr2R 14037403 intron mam + chr2R_4_14035001 chr2R_14035001 RAL-822 818 chr2R 14141922 14141939 chr2R 14142062 14142075 5 138 9.0 9.5 9.2 0.5 153 chr2R 14141922 intergenic not near genes chr2R 14141998 intergenic not near genes chr2R 14142075 intergenic not near genes chr2R_5_14140001 chr2R_14140001 RAL-822 819 chr2R 14142421 14142436 chr2R 14142542 14142561 4 124 10.0 7.5 8.8 0.4 140 chr2R 14142421 intergenic not near genes chr2R 14142491 intergenic not near genes chr2R 14142561 intergenic not near genes chr2R_4_14140001 chr2R_14140001 RAL-822 820 chr2R 14142441 14142464 chr2R 14142533 14142582 9 119 6.0 4.5 5.2 1.5 141 chr2R 14142441 intergenic not near genes chr2R 14142512 intergenic not near genes chr2R 14142582 intergenic not near genes chr2R_9_14140001 chr2R_14140001 RAL-822 821 chr2R 14285027 14285050 chr2R 14285158 14285182 12 130 2.5 6.5 4.5 2.2 155 chr2R 14285027 intron Ih + chr2R 14285104 intron Ih + chr2R 14285182 intron Ih + chr2R_12_14285001 chr2R_14285001 RAL-822 822 chr2R 14357533 14357577 chr2R 14357648 14357702 13 120 6.0 5.5 5.8 1.9 169 chr2R 14357533 intergenic CG8617 -,Arc1 - chr2R 14357618 intergenic Arc1 -,CG8617 - chr2R 14357702 intergenic Arc1 -,CG8617 - chr2R_13_14355001 chr2R_14355001 RAL-822 823 chr2R 14381776 14381818 chr2R 14381898 14381940 4 117 0.5 0.5 0.5 2.7 164 chr2R 14381776 intron Dh44-R1 + chr2R 14381858 intron Dh44-R1 + chr2R 14381940 intron Dh44-R1 + chr2R_4_14380001 chr2R_14380001 RAL-822 824 chr2R 14393866 14393888 chr2R 14393954 14393981 10 91 7.0 4.0 5.5 1.5 115 chr2R 14393866 intergenic not near genes chr2R 14393924 intergenic not near genes chr2R 14393981 intergenic not near genes chr2R_10_14390001 chr2R_14390001 RAL-822 825 chr2R 14400320 14400368 chr2R 14400453 14400490 9 131 6.0 2.5 4.2 1.7 170 chr2R 14400320 intergenic not near genes chr2R 14400405 intergenic not near genes chr2R 14400490 intergenic not near genes chr2R_9_14400001 chr2R_14400001 RAL-822 826 chr2R 14405397 14405449 chr2R 14405788 14405804 17 386 2.0 7.0 4.5 3.1 407 chr2R 14405397 intergenic not near genes chr2R 14405600 intergenic not near genes chr2R 14405804 intergenic not near genes chr2R_17_14405001 chr2R_14405001 RAL-822 827 chr2R 14426817 14426845 chr2R 14426915 14426971 7 118 7.0 4.0 5.5 1.1 154 chr2R 14426817 intergenic not near genes chr2R 14426894 intergenic phyl - chr2R 14426971 intergenic phyl - chr2R_7_14425001 chr2R_14425001 RAL-822 828 chr2R 14467304 14467325 chr2R 14476465 14476518 roo 5 9176 3.0 0.5 1.8 1.8 9214 chr2R 14467304 intergenic not near genes chr2R 14471911 intergenic not near genes chr2R 14476518 5` UTR CR44462 + chr2R_5_14470001 chr2R_14470001 RAL-822 829 chr2R 14497356 14497398 chr2R 14498557 14498594 1360 10 1193 7.0 5.0 6.0 1.4 1238 chr2R 14497356 3` UTR Cpsf160 - chr2R 14497975 intron Cpsf160 - chr2R 14498594 3` UTR Cpsf160 - chr2R_10_14495001 chr2R_14495001 RAL-822 830 chr2R 14497402 14497406 chr2R 14498556 14498607 1360 4 1188 6.0 5.0 5.5 0.6 1205 chr2R 14497402 3` UTR Cpsf160 - chr2R 14498004 intron Cpsf160 - chr2R 14498607 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 RAL-822 831 chr2R 14511721 14511775 chr2R 14511837 14511890 19 112 4.0 4.5 4.2 3.7 169 chr2R 14511721 3` UTR Asx + chr2R 14511806 3` UTR Asx + chr2R 14511890 3` UTR Asx + chr2R_19_14510001 chr2R_14510001 RAL-822 832 chr2R 14514452 14514493 chr2R 14514583 14514620 8 129 1.5 3.0 2.2 2.5 168 chr2R 14514452 intron,exon Cpr51A -,CG30197 + chr2R 14514536 intron,intron Cpr51A -,CG30197 + chr2R 14514620 intron,intron Cpr51A -,CG30197 + chr2R_8_14510001 chr2R_14510001 RAL-822 833 chr2R 14530350 14530373 chr2R 14530469 14530471 6 118 5.5 4.5 5.0 1.0 121 chr2R 14530350 intron ttv + chr2R 14530410 intron ttv + chr2R 14530471 intron ttv + chr2R_6_14530001 chr2R_14530001 RAL-822 834 chr2R 14541216 14541257 chr2R 14541508 14541549 7 285 3.5 8.5 6.0 1.0 333 chr2R 14541216 intron ttv + chr2R 14541382 intron ttv + chr2R 14541549 intron ttv + chr2R_7_14540001 chr2R_14540001 RAL-822 835 chr2R 14565527 14565586 chr2R 14565639 14565683 11 104 6.0 3.5 4.8 1.9 156 chr2R 14565527 intron ttv + chr2R 14565605 intron ttv + chr2R 14565683 intron ttv + chr2R_11_14565001 chr2R_14565001 RAL-822 836 chr2R 14623875 14623882 chr2R 14623995 14624009 4 125 0.0 9.0 4.5 0.7 134 chr2R 14623875 intron Uhg5 + chr2R 14623942 5` UTR Uhg5 + chr2R 14624009 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703c + chr2R_4_14620001 chr2R_14620001 RAL-822 837 chr2R 14707058 14707066 chr2R 14707159 14707181 5 105 1.0 0.5 0.8 2.8 123 chr2R 14707058 intron mspo - chr2R 14707120 intron mspo - chr2R 14707181 intron mspo - chr2R_5_14705001 chr2R_14705001 RAL-822 838 chr2R 14707075 14707097 chr2R 14707157 14707197 4 99 0.5 0.5 0.5 2.7 122 chr2R 14707075 intron mspo - chr2R 14707136 intron mspo - chr2R 14707197 intron mspo - chr2R_4_14705001 chr2R_14705001 RAL-822 839 chr2R 14729973 14729990 chr2R 14730051 14730064 7 95 4.5 5.0 4.8 1.2 91 chr2R 14729973 intergenic not near genes chr2R 14730018 intergenic not near genes chr2R 14730064 intergenic not near genes chr2R_7_14730001 chr2R_14730001 RAL-822 840 chr2R 14746475 14746530 chr2R 14746629 14746684 15 150 2.5 5.5 4.0 3.0 209 chr2R 14746475 3` UTR Dro + chr2R 14746580 3` UTR Dro + chr2R 14746684 3` UTR Dro + chr2R_15_14745001 chr2R_14745001 RAL-822 841 chr2R 14778956 14779007 chr2R 14779120 14779160 14 157 5.5 0.5 3.0 3.5 204 chr2R 14778956 intron kn - chr2R 14779058 intron kn - chr2R 14779160 intron kn - chr2R_14_14775001 chr2R_14775001 RAL-822 842 chr2R 14796303 14796359 chr2R 14796435 14796489 16 127 5.5 3.5 4.5 2.9 186 chr2R 14796303 intron kn - chr2R 14796396 intron kn - chr2R 14796489 intron kn - chr2R_16_14795001 chr2R_14795001 RAL-822 843 chr2R 14803443 14803504 chr2R 14803558 14803617 17 109 7.0 2.5 4.8 2.9 174 chr2R 14803443 intron kn - chr2R 14803530 intron kn - chr2R 14803617 intron kn - chr2R_17_14800001 chr2R_14800001 RAL-822 844 chr2R 14817680 14817711 chr2R 14817767 14817803 11 109 1.0 5.0 3.0 2.8 123 chr2R 14817680 intergenic CG10202 - chr2R 14817742 intergenic CG10202 - chr2R 14817803 intergenic CG10202 - chr2R_11_14815001 chr2R_14815001 RAL-822 845 chr2R 14826365 14826382 chr2R 14826504 14826521 5 134 5.5 1.0 3.2 1.2 156 chr2R 14826365 intergenic not near genes chr2R 14826443 intergenic not near genes chr2R 14826521 intergenic not near genes chr2R_5_14825001 chr2R_14825001 RAL-822 846 chr2R 14889179 14889241 chr2R 14897822 14897876 Max-element 12 8634 8.0 0.0 4.0 2.4 8697 chr2R 14889179 intergenic Cyp6a8 - chr2R 14893528 intergenic not near genes chr2R 14897876 intergenic not near genes chr2R_12_14890001 chr2R_14890001 RAL-822 847 chr2R 14911680 14911724 chr2R 14911823 14911882 8 154 2.5 2.5 2.5 2.3 202 chr2R 14911680 intron CG10249 - chr2R 14911781 intron CG10249 - chr2R 14911882 intron CG10249 - chr2R_8_14910001 chr2R_14910001 RAL-822 848 chr2R 14922116 14922148 chr2R 14922224 14922231 6 98 7.0 1.0 4.0 1.2 115 chr2R 14922116 intron CG10249 - chr2R 14922174 intron CG10249 - chr2R 14922231 intron CG10249 - chr2R_6_14920001 chr2R_14920001 RAL-822 849 chr2R 14925027 14925083 chr2R 14925214 14925254 18 187 4.0 5.5 4.8 3.1 227 chr2R 14925027 intron CG10249 - chr2R 14925140 intron CG10249 - chr2R 14925254 intron CG10249 - chr2R_18_14925001 chr2R_14925001 RAL-822 850 chr2R 14947333 14947389 chr2R 14947525 14947574 20 187 6.5 2.0 4.2 3.8 241 chr2R 14947333 intron aPKC - chr2R 14947454 intron aPKC - chr2R 14947574 intron aPKC - chr2R_20_14945001 chr2R_14945001 RAL-822 851 chr2R 14998492 14998510 chr2R 14998661 14998667 7 170 1.5 3.5 2.5 2.0 175 chr2R 14998492 intergenic not near genes chr2R 14998580 intergenic not near genes chr2R 14998667 intergenic not near genes chr2R_7_14995001 chr2R_14995001 RAL-822 852 chr2R 15004716 15004741 chr2R 15005070 15005089 jockey 7 358 5.5 5.0 5.2 1.1 373 chr2R 15004716 intergenic not near genes chr2R 15004902 intergenic not near genes chr2R 15005089 intergenic not near genes chr2R_7_15000001 chr2R_15000001 RAL-822 853 chr2R 15015438 15015439 chr2R 15022887 15022891 mdg1 4 7450 11.0 2.5 6.8 0.5 7453 chr2R 15015438 intron hbs + chr2R 15019164 intron hbs + chr2R 15022891 intron hbs + chr2R_4_15015001 chr2R_15015001 RAL-822 854 chr2R 15015446 15015479 chr2R 15022884 15022927 mdg1 7 7447 3.5 2.5 3.0 1.8 7481 chr2R 15015446 intron hbs + chr2R 15019186 intron hbs + chr2R 15022927 intron hbs + chr2R_7_15015001 chr2R_15015001 RAL-822 855 chr2R 15054730 15054770 chr2R 15054812 15054882 8 94 5.0 3.5 4.2 1.5 152 chr2R 15054730 intergenic not near genes chr2R 15054806 intergenic not near genes chr2R 15054882 intergenic not near genes chr2R_8_15050001 chr2R_15050001 RAL-822 856 chr2R 15084954 15084995 chr2R 15092037 15092079 297 12 7079 4.0 5.0 4.5 2.2 7125 chr2R 15084954 intergenic not near genes chr2R 15088516 intergenic not near genes chr2R 15092079 5` UTR CR44457 + chr2R_12_15085001 chr2R_15085001 RAL-822 857 chr2R 15100982 15101014 chr2R 15101112 15101144 6 123 5.0 3.0 4.0 1.2 162 chr2R 15100982 intergenic not near genes chr2R 15101063 intergenic not near genes chr2R 15101144 intergenic not near genes chr2R_6_15100001 chr2R_15100001 RAL-822 858 chr2R 15101017 15101038 chr2R 15101111 15101168 8 116 4.5 3.0 3.8 1.7 151 chr2R 15101017 intergenic not near genes chr2R 15101092 intergenic not near genes chr2R 15101168 intergenic not near genes chr2R_8_15100001 chr2R_15100001 RAL-822 859 chr2R 15103895 15103933 chr2R 15104031 15104068 8 126 2.0 7.5 4.8 1.4 173 chr2R 15103895 intergenic not near genes chr2R 15103982 intergenic not near genes chr2R 15104068 intergenic not near genes chr2R_8_15100001 chr2R_15100001 RAL-822 860 chr2R 15160754 15160785 chr2R 15161027 15161070 12 277 1.0 4.5 2.8 3.2 316 chr2R 15160754 intron igl + chr2R 15160912 intron igl + chr2R 15161070 intron igl + chr2R_12_15160001 chr2R_15160001 RAL-822 861 chr2R 15259047 15259081 chr2R 15259156 15259200 9 115 7.5 7.5 7.5 1.1 153 chr2R 15259047 intron ItgalphaPS4 + chr2R 15259124 intron ItgalphaPS4 + chr2R 15259200 intron ItgalphaPS4 + chr2R_9_15255001 chr2R_15255001 RAL-822 862 chr2R 15375052 15375060 chr2R 15375186 15375192 4 138 5.0 0.5 2.8 1.1 140 chr2R 15375052 intergenic not near genes chr2R 15375122 intergenic not near genes chr2R 15375192 intergenic not near genes chr2R_4_15375001 chr2R_15375001 RAL-822 863 chr2R 15375343 15375357 chr2R 15376185 15376197 4 843 0.5 8.0 4.2 0.8 854 chr2R 15375343 intergenic not near genes chr2R 15375770 intergenic not near genes chr2R 15376197 intergenic dup - chr2R_4_15375001 chr2R_15375001 RAL-822 864 chr2R 15390007 15390024 chr2R 15390142 15390168 4 141 4.0 5.5 4.8 0.7 161 chr2R 15390007 intergenic not near genes chr2R 15390088 intergenic not near genes chr2R 15390168 intergenic not near genes chr2R_4_15390001 chr2R_15390001 RAL-822 865 chr2R 15511101 15511165 chr2R 15511213 15511276 17 106 5.0 3.0 4.0 3.4 175 chr2R 15511101 intergenic not near genes chr2R 15511188 intergenic not near genes chr2R 15511276 intergenic GalNAc-T1 + chr2R_17_15510001 chr2R_15510001 RAL-822 866 chr2R 15656029 15656065 chr2R 15656155 15656191 4 126 0.5 6.5 3.5 0.9 162 chr2R 15656029 intron CG42524 + chr2R 15656110 intron CG42524 + chr2R 15656191 intron CG42524 + chr2R_4_15655001 chr2R_15655001 RAL-822 867 chr2R 15685333 15685396 chr2R 15685469 15685529 18 133 2.5 4.0 3.2 4.3 196 chr2R 15685333 intron,exon Ranbp11 +,CG30082 - chr2R 15685431 intron,intron Ranbp11 +,CG30082 - chr2R 15685529 intron,exon Ranbp11 +,CG30082 - chr2R_18_15685001 chr2R_15685001 RAL-822 868 chr2R 15718491 15718536 chr2R 15718606 15718646 5 107 1.0 5.0 3.0 1.2 155 chr2R 15718491 intergenic not near genes chr2R 15718568 intergenic not near genes chr2R 15718646 intergenic not near genes chr2R_5_15715001 chr2R_15715001 RAL-822 869 chr2R 15810042 15810071 chr2R 15810315 15810338 8 290 3.5 2.5 3.0 2.0 296 chr2R 15810042 intron,intron Zasp52 -,tun + chr2R 15810190 intron,intron Zasp52 -,tun + chr2R 15810338 intron,intron Zasp52 -,tun + chr2R_8_15810001 chr2R_15810001 RAL-822 870 chr2R 15891789 15891836 chr2R 15891895 15891947 10 108 6.0 7.5 6.8 1.3 158 chr2R 15891789 intron sli - chr2R 15891868 intron sli - chr2R 15891947 intron sli - chr2R_10_15890001 chr2R_15890001 RAL-822 871 chr2R 16168832 16168838 chr2R 16168934 16168964 4 112 3.5 5.5 4.5 0.7 132 chr2R 16168832 exon lbk + chr2R 16168898 3` UTR lbk + chr2R 16168964 3` UTR lbk + chr2R_4_16165001 chr2R_16165001 RAL-822 872 chr2R 16168840 16168852 chr2R 16168917 16168956 5 95 1.0 3.5 2.2 1.6 116 chr2R 16168840 exon lbk + chr2R 16168898 3` UTR lbk + chr2R 16168956 3` UTR lbk + chr2R_5_16165001 chr2R_16165001 RAL-822 873 chr2R 16225873 16225879 chr2R 16225943 16226002 4 98 2.0 3.5 2.8 1.1 129 chr2R 16225873 intron CG15706 - chr2R 16225938 intron CG15706 - chr2R 16226002 intron CG15706 - chr2R_4_16225001 chr2R_16225001 RAL-822 874 chr2R 16245419 16245429 chr2R 16245539 16245548 8 124 0.5 5.5 3.0 2.0 129 chr2R 16245419 intron CngA - chr2R 16245484 intron CngA - chr2R 16245548 intron CngA - chr2R_8_16245001 chr2R_16245001 RAL-822 875 chr2R 16352839 16352866 chr2R 16352957 16352974 6 116 5.0 10.0 7.5 0.7 135 chr2R 16352839 intergenic not near genes chr2R 16352906 intergenic not near genes chr2R 16352974 intergenic not near genes chr2R_6_16350001 chr2R_16350001 RAL-822 876 chr2R 16518022 16518066 chr2R 16518123 16518157 8 101 7.5 4.0 5.8 1.2 135 chr2R 16518022 intron Sema-2a + chr2R 16518090 intron Sema-2a + chr2R 16518157 intron Sema-2a + chr2R_8_16515001 chr2R_16515001 RAL-822 877 chr2R 16530465 16530499 chr2R 16530668 16530695 7 205 6.0 1.0 3.5 1.6 230 chr2R 16530465 exon Sema-2a + chr2R 16530580 intron Sema-2a + chr2R 16530695 intron Sema-2a + chr2R_7_16530001 chr2R_16530001 RAL-822 878 chr2R 16538067 16538090 chr2R 16538194 16538218 4 128 3.0 6.0 4.5 0.7 151 chr2R 16538067 intergenic not near genes chr2R 16538142 intergenic not near genes chr2R 16538218 intergenic not near genes chr2R_4_16535001 chr2R_16535001 RAL-822 879 chr2R 16546982 16547014 chr2R 16547082 16547114 4 104 0.0 0.0 0.0 4.0 132 chr2R 16546982 intergenic not near genes chr2R 16547048 intergenic not near genes chr2R 16547114 intergenic not near genes chr2R_4_16545001 chr2R_16545001 RAL-822 880 chr2R 16571855 16571904 chr2R 16571974 16572018 23 124 2.0 6.5 4.2 4.4 163 chr2R 16571855 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16572018 intergenic CG4927 + chr2R_23_16570001 chr2R_16570001 RAL-822 881 chr2R 16601485 16601542 chr2R 16601631 16601643 5 123 6.5 0.0 3.2 1.2 158 chr2R 16601485 intron CG8303 - chr2R 16601564 intron CG8303 - chr2R 16601643 intron CG8303 - chr2R_5_16600001 chr2R_16600001 RAL-822 882 chr2R 16705224 16705249 chr2R 16705367 16705402 5 152 3.5 5.5 4.5 0.9 178 chr2R 16705224 intron CG30463 - chr2R 16705313 intron CG30463 - chr2R 16705402 intron CG30463 - chr2R_5_16705001 chr2R_16705001 RAL-822 883 chr2R 16775647 16775673 chr2R 16775909 16775952 14 278 3.0 5.5 4.2 2.7 305 chr2R 16775647 3` UTR Arp53D + chr2R 16775800 intergenic Arp53D + chr2R 16775952 intergenic Arp53D + chr2R_14_16775001 chr2R_16775001 RAL-822 884 chr2R 16787440 16787499 chr2R 16787556 16787601 15 110 7.0 3.0 5.0 2.5 161 chr2R 16787440 intron CG5522 + chr2R 16787520 intron CG5522 + chr2R 16787601 intron CG5522 + chr2R_15_16785001 chr2R_16785001 RAL-822 885 chr2R 16972419 16972457 chr2R 16972540 16972589 5 126 2.5 1.5 2.0 1.7 170 chr2R 16972419 intergenic not near genes chr2R 16972504 intergenic not near genes chr2R 16972589 intergenic not near genes chr2R_5_16970001 chr2R_16970001 RAL-822 886 chr2R 16975186 16975218 chr2R 16975280 16975330 11 103 2.5 3.0 2.8 2.9 144 chr2R 16975186 intron Cbp53E + chr2R 16975258 intron Cbp53E + chr2R 16975330 intron Cbp53E + chr2R_11_16975001 chr2R_16975001 RAL-822 887 chr2R 17139396 17139406 chr2R 17139556 17139581 5 165 0.5 4.0 2.2 1.6 185 chr2R 17139396 3` UTR CG11395 + chr2R 17139488 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139581 3` UTR,3` UTR CG11395 +,CG43103 - chr2R_5_17135001 chr2R_17135001 RAL-822 888 chr2R 17147212 17147260 chr2R 17152278 17152296 jockey 17 5058 3.5 8.5 6.0 2.4 5084 chr2R 17147212 intergenic not near genes chr2R 17149754 intergenic not near genes chr2R 17152296 intergenic not near genes chr2R_17_17145001 chr2R_17145001 RAL-822 889 chr2R 17152685 17152744 chr2R 17152844 17152888 15 152 5.0 1.0 3.0 3.8 203 chr2R 17152685 intergenic not near genes chr2R 17152786 intergenic not near genes chr2R 17152888 intergenic not near genes chr2R_15_17150001 chr2R_17150001 RAL-822 890 chr2R 17169200 17169227 chr2R 17169306 17169344 9 116 1.5 1.5 1.5 3.6 144 chr2R 17169200 intergenic not near genes chr2R 17169272 intergenic not near genes chr2R 17169344 intergenic not near genes chr2R_9_17165001 chr2R_17165001 RAL-822 891 chr2R 17176357 17176378 chr2R 17182582 17182598 diver 6 6223 0.5 6.0 3.2 1.4 6241 chr2R 17176357 intergenic not near genes chr2R 17179478 intergenic not near genes chr2R 17182598 intergenic not near genes chr2R_6_17175001 chr2R_17175001 RAL-822 892 chr2R 17236484 17236540 chr2R 17241723 17241752 copia 10 5222 2.0 5.5 3.8 2.1 5268 chr2R 17236484 intron mbl + chr2R 17239118 intron mbl + chr2R 17241752 intron mbl + chr2R_10_17235001 chr2R_17235001 RAL-822 893 chr2R 17419912 17419964 chr2R 17420021 17420077 4 111 0.0 1.0 0.5 2.7 165 chr2R 17419912 5` UTR cnk - chr2R 17419994 5` UTR cnk - chr2R 17420077 intergenic cnk -,l(2)k01209 + chr2R_4_17415001 chr2R_17415001 RAL-822 894 chr2R 17458975 17459038 chr2R 17459091 17459128 18 115 7.0 7.5 7.2 2.2 153 chr2R 17458975 intron CG14478 + chr2R 17459052 intron CG14478 + chr2R 17459128 intron CG14478 + chr2R_18_17455001 chr2R_17455001 RAL-822 895 chr2R 17470317 17470351 chr2R 17470412 17470459 7 104 3.5 4.5 4.0 1.4 142 chr2R 17470317 intron qkr54B + chr2R 17470388 intron qkr54B + chr2R 17470459 intron qkr54B + chr2R_7_17470001 chr2R_17470001 RAL-822 896 chr2R 17485901 17485948 chr2R 17490683 17490743 F-element 8 4784 7.5 5.5 6.5 1.1 4842 chr2R 17485901 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488322 intron NT5E-2 + chr2R 17490743 intron NT5E-2 + chr2R_8_17485001 chr2R_17485001 RAL-822 897 chr2R 17655205 17655230 chr2R 17655280 17655322 4 84 3.0 3.0 3.0 1.0 117 chr2R 17655205 intron CCHa1-R - chr2R 17655264 intron CCHa1-R - chr2R 17655322 intron CCHa1-R - chr2R_4_17655001 chr2R_17655001 RAL-822 898 chr2R 17679569 17679603 chr2R 17679731 17679760 4 157 1.0 3.0 2.0 1.3 191 chr2R 17679569 intron Sema-1b - chr2R 17679664 intron Sema-1b - chr2R 17679760 intron Sema-1b - chr2R_4_17675001 chr2R_17675001 RAL-822 899 chr2R 17782330 17782393 chr2R 17783568 17783620 pogo 19 1233 3.0 4.5 3.8 4.0 1290 chr2R 17782330 intergenic CG33981 -,fab1 - chr2R 17782975 intergenic not near genes chr2R 17783620 intergenic mir-31a - chr2R_19_17780001 chr2R_17780001 RAL-822 900 chr2R 17821703 17821743 chr2R 17821815 17821840 9 108 4.5 4.0 4.2 1.7 137 chr2R 17821703 intron grh + chr2R 17821772 intron grh + chr2R 17821840 intron grh + chr2R_9_17820001 chr2R_17820001 RAL-822 901 chr2R 17852894 17852954 chr2R 17853019 17853080 15 121 4.0 6.5 5.2 2.4 186 chr2R 17852894 intron olf186-F + chr2R 17852987 intron olf186-F + chr2R 17853080 intron olf186-F + chr2R_15_17850001 chr2R_17850001 RAL-822 902 chr2R 17876293 17876319 chr2R 17876743 17876754 4 451 2.5 2.5 2.5 1.1 461 chr2R 17876293 intron Elk + chr2R 17876524 intron Elk + chr2R 17876754 intron Elk + chr2R_4_17875001 chr2R_17875001 RAL-822 903 chr2R 17961429 17961487 chr2R 17961744 17961758 14 306 6.5 0.5 3.5 3.1 329 chr2R 17961429 intergenic not near genes chr2R 17961594 intergenic not near genes chr2R 17961758 intergenic not near genes chr2R_14_17960001 chr2R_17960001 RAL-822 904 chr2R 17982899 17982953 chr2R 17983011 17983073 11 105 2.5 2.5 2.5 3.1 174 chr2R 17982899 intron dpr13 - chr2R 17982986 intron dpr13 - chr2R 17983073 intron dpr13 - chr2R_11_17980001 chr2R_17980001 RAL-822 905 chr2R 17995114 17995175 chr2R 17995270 17995323 11 150 5.0 6.0 5.5 1.7 209 chr2R 17995114 intron dpr13 - chr2R 17995218 intron dpr13 - chr2R 17995323 intron dpr13 - chr2R_11_17995001 chr2R_17995001 RAL-822 906 chr2R 18045639 18045700 chr2R 18046026 18046076 jockey 16 382 0.5 6.0 3.2 3.8 437 chr2R 18045639 intergenic not near genes chr2R 18045858 intergenic not near genes chr2R 18046076 intergenic CG5767 - chr2R_16_18045001 chr2R_18045001 RAL-822 907 chr2R 18168374 18168426 chr2R 18168506 18168571 23 140 4.0 5.5 4.8 4.0 197 chr2R 18168374 3` UTR,3` UTR CG42518 +,MED9 + chr2R 18168472 intergenic CG42518 +,MED9 +,Dgp-1 - chr2R 18168571 intergenic Dgp-1 -,CG42518 +,MED9 + chr2R_23_18165001 chr2R_18165001 RAL-822 908 chr2R 18189696 18189702 chr2R 18189813 18189822 4 123 7.0 0.0 3.5 0.9 126 chr2R 18189696 intron CG33958 - chr2R 18189759 intron CG33958 - chr2R 18189822 intron CG33958 - chr2R_4_18185001 chr2R_18185001 RAL-822 909 chr2R 18204110 18204139 chr2R 18204228 18204259 4 120 2.5 0.0 1.2 1.8 149 chr2R 18204110 intergenic not near genes chr2R 18204184 intergenic not near genes chr2R 18204259 intergenic not near genes chr2R_4_18200001 chr2R_18200001 RAL-822 910 chr2R 18308250 18308272 chr2R 18308391 18308394 6 136 9.5 2.5 6.0 0.9 144 chr2R 18308250 intron sbb - chr2R 18308322 intron sbb - chr2R 18308394 intron sbb - chr2R_6_18305001 chr2R_18305001 RAL-822 911 chr2R 18308277 18308318 chr2R 18308388 18308459 17 129 3.0 2.5 2.8 4.5 182 chr2R 18308277 intron sbb - chr2R 18308368 intron sbb - chr2R 18308459 intron sbb - chr2R_17_18305001 chr2R_18305001 RAL-822 912 chr2R 18358386 18358414 chr2R 18372632 18372661 roo 4 14247 4.0 5.0 4.5 0.7 14275 chr2R 18358386 intergenic not near genes chr2R 18365524 intergenic not near genes chr2R 18372661 intergenic not near genes chr2R_4_18365001 chr2R_18365001 RAL-822 913 chr2R 18398125 18398190 chr2R 18398255 18398319 19 122 4.5 2.5 3.5 4.2 194 chr2R 18398125 intron GstE10 - chr2R 18398222 intron GstE10 - chr2R 18398319 intron GstE10 - chr2R_19_18395001 chr2R_18395001 RAL-822 914 chr2R 18408269 18408302 chr2R 18408424 18408458 7 146 1.5 6.0 3.8 1.5 189 chr2R 18408269 exon GstE8 + chr2R 18408364 exon GstE8 + chr2R 18408458 exon GstE8 + chr2R_7_18405001 chr2R_18405001 RAL-822 915 chr2R 18408304 18408309 chr2R 18408415 18408455 6 132 1.0 4.0 2.5 1.7 151 chr2R 18408304 exon GstE8 + chr2R 18408380 exon GstE8 + chr2R 18408455 exon GstE8 + chr2R_6_18405001 chr2R_18405001 RAL-822 916 chr2R 18471918 18471930 chr2R 18472019 18472041 5 108 0.0 1.0 0.5 3.3 123 chr2R 18471918 intron CG30116 - chr2R 18471980 intron CG30116 - chr2R 18472041 intron CG30116 - chr2R_5_18470001 chr2R_18470001 RAL-822 917 chr2R 18575811 18575828 chr2R 18581984 18582046 3S18 6 6190 3.5 2.0 2.8 1.6 6235 chr2R 18575811 intron GEFmeso - chr2R 18578928 intron GEFmeso - chr2R 18582046 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 RAL-822 918 chr2R 18590846 18590899 chr2R 18600021 18600076 roo 4 9164 2.0 3.5 2.8 1.1 9230 chr2R 18590846 intron GEFmeso - chr2R 18595461 intron GEFmeso - chr2R 18600076 intron GEFmeso - chr2R_4_18595001 chr2R_18595001 RAL-822 919 chr2R 18657509 18657551 chr2R 18659897 18659939 9 2386 39.0 16.0 27.5 0.3 2430 chr2R 18657509 intron SP2637 - chr2R 18658724 3` UTR,exon CG42306 -,Gint3 - chr2R 18659939 intron,intron CG42306 -,Gint3 - chr2R_9_18655001 chr2R_18655001 RAL-822 920 chr2R 18675164 18675169 chr2R 18675257 18675274 4 103 0.0 12.0 6.0 0.6 110 chr2R 18675164 intergenic not near genes chr2R 18675219 intergenic not near genes chr2R 18675274 intergenic not near genes chr2R_4_18675001 chr2R_18675001 RAL-822 921 chr2R 18692872 18692901 chr2R 18692991 18693020 9 116 9.0 0.5 4.8 1.6 148 chr2R 18692872 intron Sik3 + chr2R 18692946 intron Sik3 + chr2R 18693020 intron Sik3 + chr2R_9_18690001 chr2R_18690001 RAL-822 922 chr2R 18713205 18713270 chr2R 18713317 18713372 19 107 2.5 4.5 3.5 4.2 167 chr2R 18713205 intergenic not near genes chr2R 18713288 intergenic not near genes chr2R 18713372 intergenic not near genes chr2R_19_18710001 chr2R_18710001 RAL-822 923 chr2R 18726875 18727092 chr2R 18726975 18727253 18 147 7.0 3.0 5.0 3.0 378 chr2R 18726875 intron Hs3st-A + chr2R 18727064 intron Hs3st-A + chr2R 18727253 intron Hs3st-A + chr2R_18_18725001 chr2R_18725001 RAL-822 924 chr2R 18738192 18738223 chr2R 18738293 18738334 14 106 0.0 4.0 2.0 4.7 142 chr2R 18738192 intron Hs3st-A + chr2R 18738263 intron Hs3st-A + chr2R 18738334 intron Hs3st-A + chr2R_14_18735001 chr2R_18735001 RAL-822 925 chr2R 18924241 18924300 chr2R 18924356 18924409 14 109 2.5 2.5 2.5 4.0 168 chr2R 18924241 intron sano + chr2R 18924325 intron sano + chr2R 18924409 intron sano + chr2R_14_18920001 chr2R_18920001 RAL-822 926 chr2R 18926473 18926483 chr2R 18926595 18926605 4 122 9.0 0.5 4.8 0.7 132 chr2R 18926473 intron sano + chr2R 18926539 intron sano + chr2R 18926605 intron sano + chr2R_4_18925001 chr2R_18925001 RAL-822 927 chr2R 18926491 18926522 chr2R 18926593 18926629 8 114 2.0 0.5 1.2 3.6 138 chr2R 18926491 intron sano + chr2R 18926560 intron sano + chr2R 18926629 intron sano + chr2R_8_18925001 chr2R_18925001 RAL-822 928 chr2R 18932908 18932920 chr2R 18933031 18933037 4 122 5.0 2.0 3.5 0.9 129 chr2R 18932908 intron sano + chr2R 18932972 intron sano + chr2R 18933037 intron sano + chr2R_4_18930001 chr2R_18930001 RAL-822 929 chr2R 18936911 18936967 chr2R 18937078 18937133 16 164 4.0 5.0 4.5 2.9 222 chr2R 18936911 intron sano + chr2R 18937022 intron sano + chr2R 18937133 intron sano + chr2R_16_18935001 chr2R_18935001 RAL-822 930 chr2R 18953139 18953170 chr2R 18953261 18953268 9 114 3.0 7.5 5.2 1.5 129 chr2R 18953139 intron sano + chr2R 18953204 intron sano + chr2R 18953268 intron sano + chr2R_9_18950001 chr2R_18950001 RAL-822 931 chr2R 18953174 18953186 chr2R 18953245 18953295 4 104 2.5 5.0 3.8 0.8 121 chr2R 18953174 intron sano + chr2R 18953234 intron sano + chr2R 18953295 intron sano + chr2R_4_18950001 chr2R_18950001 RAL-822 932 chr2R 18964895 18964953 chr2R 18964996 18965044 17 107 3.5 2.0 2.8 4.5 149 chr2R 18964895 intergenic not near genes chr2R 18964970 intergenic not near genes chr2R 18965044 intergenic not near genes chr2R_17_18960001 chr2R_18960001 RAL-822 933 chr2R 18988982 18989041 chr2R 18989095 18989149 20 110 0.0 1.0 0.5 13.3 167 chr2R 18988982 intron tn + chr2R 18989066 intron tn + chr2R 18989149 intron tn + chr2R_20_18985001 chr2R_18985001 RAL-822 934 chr2R 19026023 19026054 chr2R 19026198 19026204 6 167 8.5 3.5 6.0 0.9 181 chr2R 19026023 intron 5-HT1B - chr2R 19026114 intron 5-HT1B - chr2R 19026204 intron 5-HT1B - chr2R_6_19025001 chr2R_19025001 RAL-822 935 chr2R 19067692 19067738 chr2R 19067801 19067839 10 109 5.0 1.5 3.2 2.4 147 chr2R 19067692 intron 5-HT1A + chr2R 19067766 intron 5-HT1A + chr2R 19067839 intron 5-HT1A + chr2R_10_19065001 chr2R_19065001 RAL-822 936 chr2R 19183341 19183372 chr2R 19183429 19183463 8 96 2.5 4.0 3.2 1.9 122 chr2R 19183341 intron hppy + chr2R 19183402 intron hppy + chr2R 19183463 intron hppy + chr2R_8_19180001 chr2R_19180001 RAL-822 937 chr2R 19209189 19209213 chr2R 19209282 19209339 4 100 3.5 3.5 3.5 0.9 150 chr2R 19209189 intron hppy + chr2R 19209264 intron hppy + chr2R 19209339 intron hppy + chr2R_4_19205001 chr2R_19205001 RAL-822 938 chr2R 19253061 19253126 chr2R 19253186 19253251 13 123 2.5 4.5 3.5 2.9 190 chr2R 19253061 exon CG33453 - chr2R 19253156 exon CG33453 - chr2R 19253251 intergenic CG33453 - chr2R_13_19250001 chr2R_19250001 RAL-822 939 chr2R 19283780 19283820 chr2R 19286761 19286803 9 2981 14.0 1.0 7.5 1.1 3023 chr2R 19283780 exon CG11906 - chr2R 19285292 intergenic CG10476 -,CG10474 - chr2R 19286803 intergenic CG10474 - chr2R_9_19285001 chr2R_19285001 RAL-822 940 chr2R 19282934 19282944 chr2R 19285527 19285575 4 2613 9.0 8.0 8.5 0.4 2641 chr2R 19282934 exon CG11906 - chr2R 19284254 intergenic CG11906 -,CG10476 - chr2R 19285575 exon CG10474 - chr2R_4_19280001 chr2R_19280001 RAL-822 941 chr2R 19300927 19300989 chr2R 19301045 19301091 15 115 2.0 3.0 2.5 4.3 164 chr2R 19300927 intron Tab2 + chr2R 19301009 intron Tab2 + chr2R 19301091 intron Tab2 + chr2R_15_19300001 chr2R_19300001 RAL-822 942 chr2R 19536432 19536499 chr2R 19536549 19536611 33 111 4.5 3.0 3.8 6.9 179 chr2R 19536432 intron sm - chr2R 19536522 intron sm - chr2R 19536611 intron sm - chr2R_33_19535001 chr2R_19535001 RAL-822 943 chr2R 19575537 19575575 chr2R 19575649 19575683 9 109 3.5 4.5 4.0 1.8 146 chr2R 19575537 intron sm - chr2R 19575610 intron sm - chr2R 19575683 intron sm - chr2R_9_19575001 chr2R_19575001 RAL-822 944 chr2R 19603949 19604007 chr2R 19604062 19604064 7 92 0.0 4.0 2.0 2.3 115 chr2R 19603949 intron sm - chr2R 19604006 intron sm - chr2R 19604064 intron sm - chr2R_7_19600001 chr2R_19600001 RAL-822 945 chr2R 19776574 19776623 chr2R 19779918 19779971 jockey 19 3352 4.0 4.0 4.0 3.8 3397 chr2R 19776574 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779971 intergenic not near genes chr2R_19_19775001 chr2R_19775001 RAL-822 946 chr2R 19807646 19807698 chr2R 19807761 19807803 6 111 3.0 3.5 3.2 1.4 157 chr2R 19807646 intergenic not near genes chr2R 19807724 intergenic not near genes chr2R 19807803 intergenic not near genes chr2R_6_19805001 chr2R_19805001 RAL-822 947 chr2R 19914816 19914877 chr2R 19922263 19922299 mdg1 10 7438 5.0 4.0 4.5 1.8 7483 chr2R 19914816 intergenic not near genes chr2R 19918558 intergenic not near genes chr2R 19922299 intergenic not near genes chr2R_10_19915001 chr2R_19915001 RAL-822 948 chr2R 19943265 19943294 chr2R 19943385 19943404 9 117 1.0 4.0 2.5 2.6 139 chr2R 19943265 intergenic not near genes chr2R 19943334 intergenic not near genes chr2R 19943404 intergenic not near genes chr2R_9_19940001 chr2R_19940001 RAL-822 949 chr2R 19985035 19985051 chr2R 19985141 19985164 8 112 2.0 3.5 2.8 2.1 129 chr2R 19985035 intergenic CG8654 + chr2R 19985100 intergenic CG8654 + chr2R 19985164 intergenic CG8654 + chr2R_8_19985001 chr2R_19985001 RAL-822 950 chr2R 20038947 20038964 chr2R 20039076 20039109 4 145 0.5 0.5 0.5 2.7 162 chr2R 20038947 intergenic not near genes chr2R 20039028 intergenic not near genes chr2R 20039109 intergenic not near genes chr2R_4_20035001 chr2R_20035001 RAL-822 951 chr2R 20057173 20057197 chr2R 20057306 20057320 4 129 3.5 3.5 3.5 0.9 147 chr2R 20057173 intergenic not near genes chr2R 20057246 intergenic not near genes chr2R 20057320 intergenic not near genes chr2R_4_20055001 chr2R_20055001 RAL-822 952 chr2R 20060687 20060711 chr2R 20061078 20061089 5 384 6.5 1.0 3.8 1.0 402 chr2R 20060687 intergenic not near genes chr2R 20060888 intergenic not near genes chr2R 20061089 intergenic not near genes chr2R_5_20060001 chr2R_20060001 RAL-822 953 chr2R 20060713 20060743 chr2R 20061077 20061105 10 367 4.5 1.0 2.8 2.6 392 chr2R 20060713 intergenic not near genes chr2R 20060909 intergenic not near genes chr2R 20061105 intergenic not near genes chr2R_10_20060001 chr2R_20060001 RAL-822 954 chr2R 20069218 20069240 chr2R 20071872 20071914 opus 4 2667 0.0 2.0 1.0 2.0 2696 chr2R 20069218 intergenic not near genes chr2R 20070566 intergenic not near genes chr2R 20071914 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-822 955 chr2R 20125711 20125749 chr2R 20125822 20125845 11 109 5.5 11.0 8.2 1.2 134 chr2R 20125711 intergenic not near genes chr2R 20125778 intergenic not near genes chr2R 20125845 intergenic not near genes chr2R_11_20125001 chr2R_20125001 RAL-822 956 chr2R 20223938 20223985 chr2R 20224043 20224105 8 110 5.5 4.5 5.0 1.3 167 chr2R 20223938 intergenic not near genes chr2R 20224022 intergenic not near genes chr2R 20224105 intergenic not near genes chr2R_8_20220001 chr2R_20220001 RAL-822 957 chr2R 20382323 20382351 chr2R 20382423 20382446 7 95 3.0 1.5 2.2 2.2 123 chr2R 20382323 intergenic not near genes chr2R 20382384 intergenic not near genes chr2R 20382446 intergenic not near genes chr2R_7_20380001 chr2R_20380001 RAL-822 958 chr2R 20555303 20555337 chr2R 20555430 20555464 7 127 2.5 1.5 2.0 2.3 161 chr2R 20555303 intergenic not near genes chr2R 20555384 intergenic not near genes chr2R 20555464 intergenic not near genes chr2R_7_20555001 chr2R_20555001 RAL-822 959 chr2R 20578631 20578683 chr2R 20578744 20578798 5 115 1.0 2.0 1.5 2.0 167 chr2R 20578631 intron qsm - chr2R 20578714 intron qsm - chr2R 20578798 intron qsm - chr2R_5_20575001 chr2R_20575001 RAL-822 960 chr2R 20592573 20592598 chr2R 20592663 20592705 4 95 3.0 4.0 3.5 0.9 132 chr2R 20592573 intron bl + chr2R 20592639 intron bl + chr2R 20592705 intron bl + chr2R_4_20590001 chr2R_20590001 RAL-822 961 chr2R 20601691 20601755 chr2R 20601811 20601875 15 112 0.0 3.0 1.5 6.0 184 chr2R 20601691 intron bl + chr2R 20601783 intron bl + chr2R 20601875 intron bl + chr2R_15_20600001 chr2R_20600001 RAL-822 962 chr2R 20674477 20674499 chr2R 20674858 20674877 6 379 7.0 5.0 6.0 0.9 400 chr2R 20674477 intergenic not near genes chr2R 20674677 intergenic not near genes chr2R 20674877 intergenic not near genes chr2R_6_20670001 chr2R_20670001 RAL-822 963 chr2R 20739436 20739474 chr2R 20744210 20744228 F-element 7 4771 4.0 4.5 4.2 1.3 4792 chr2R 20739436 intron dpr + chr2R 20741832 intron dpr + chr2R 20744228 intron dpr + chr2R_7_20740001 chr2R_20740001 RAL-822 964 chr2R 20761064 20761114 chr2R 20761193 20761254 5 138 2.0 0.0 1.0 2.5 190 chr2R 20761064 intergenic not near genes chr2R 20761159 intergenic not near genes chr2R 20761254 intergenic not near genes chr2R_5_20760001 chr2R_20760001 RAL-822 965 chr2R 20783276 20783328 chr2R 20788083 20788095 F-element 15 4800 2.0 6.0 4.0 3.0 4819 chr2R 20783276 intergenic not near genes chr2R 20785686 intergenic not near genes chr2R 20788095 intergenic CG43666 - chr2R_15_20785001 chr2R_20785001 RAL-822 966 chr2R 20962876 20962935 chr2R 20963009 20963063 14 124 4.0 4.0 4.0 2.8 187 chr2R 20962876 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963063 intergenic not near genes chr2R_14_20960001 chr2R_20960001 RAL-822 967 chr2R 20983885 20983944 chr2R 20984004 20984053 12 112 3.0 8.0 5.5 1.8 168 chr2R 20983885 3` UTR,3` UTR CG9313 +,CG15651 - chr2R 20983969 3` UTR,3` UTR CG9313 +,CG15651 - chr2R 20984053 3` UTR CG15651 - chr2R_12_20980001 chr2R_20980001 RAL-822 968 chr2R 21060625 21060661 chr2R 21060724 21060733 9 107 7.5 4.5 6.0 1.3 108 chr2R 21060625 intergenic CG15653 -,mRpL54 + chr2R 21060679 intergenic mRpL54 +,CG15653 - chr2R 21060733 intergenic mRpL54 +,CG15653 - chr2R_9_21060001 chr2R_21060001 RAL-822 969 chr2R 21091412 21091472 chr2R 21091530 21091590 18 115 4.0 1.0 2.5 5.1 178 chr2R 21091412 intergenic Rbpn-5 - chr2R 21091501 intergenic Rbpn-5 - chr2R 21091590 intergenic not near genes chr2R_18_21090001 chr2R_21090001 RAL-822 970 chr2R 21113446 21113482 chr2R 21113570 21113606 9 123 8.5 6.0 7.2 1.1 160 chr2R 21113446 intron ktub + chr2R 21113526 intron ktub + chr2R 21113606 intron ktub + chr2R_9_21110001 chr2R_21110001 RAL-822 971 chr2R 21151087 21151097 chr2R 21153755 21153765 opus 4 2668 9.5 6.0 7.8 0.5 2678 chr2R 21151087 intron CG30389 - chr2R 21152426 intron CG30389 - chr2R 21153765 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-822 972 chr2R 21151104 21151144 chr2R 21153752 21153812 opus 10 2656 5.0 5.5 5.2 1.6 2708 chr2R 21151104 intron CG30389 - chr2R 21152458 intron CG30389 - chr2R 21153812 intron CG30389 - chr2R_10_21150001 chr2R_21150001 RAL-822 973 chr2R 21188212 21188250 chr2R 21188313 21188361 5 112 3.5 4.5 4.0 1.0 149 chr2R 21188212 exon tud + chr2R 21188286 intron tud + chr2R 21188361 intron tud + chr2R_5_21185001 chr2R_21185001 RAL-822 974 chr2R 21257347 21257384 chr2R 21257750 21257755 5 390 2.0 1.0 1.5 2.0 408 chr2R 21257347 intron Rgk3 + chr2R 21257551 intron Rgk3 + chr2R 21257755 intron Rgk3 + chr2R_5_21255001 chr2R_21255001 RAL-822 975 chr2R 21285408 21285436 chr2R 21285515 21285548 6 95 4.0 7.5 5.8 0.9 140 chr2R 21285408 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285478 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285548 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_6_21285001 chr2R_21285001 RAL-822 976 chr2R 21363121 21363183 chr2R 21363239 21363291 6 116 0.0 0.0 0.0 6.0 170 chr2R 21363121 intron cv-2 - chr2R 21363206 intron cv-2 - chr2R 21363291 intron cv-2 - chr2R_6_21360001 chr2R_21360001 RAL-822 977 chr2R 21505730 21505796 chr2R 21505846 21505912 20 108 5.0 4.0 4.5 3.6 182 chr2R 21505730 intron MESK2 + chr2R 21505821 intron MESK2 + chr2R 21505912 intron MESK2 + chr2R_20_21505001 chr2R_21505001 RAL-822 978 chr2R 21546020 21546064 chr2R 21546133 21546136 7 106 5.5 8.5 7.0 0.9 116 chr2R 21546020 intron Egfr + chr2R 21546078 intron Egfr + chr2R 21546136 intron Egfr + chr2R_7_21545001 chr2R_21545001 RAL-822 979 chr2R 21580466 21580531 chr2R 21580584 21580621 12 111 0.5 4.5 2.5 3.4 155 chr2R 21580466 intergenic not near genes chr2R 21580544 intergenic not near genes chr2R 21580621 intergenic not near genes chr2R_12_21580001 chr2R_21580001 RAL-822 980 chr2R 21666435 21666442 chr2R 21666551 21666559 4 117 14.5 6.5 10.5 0.3 124 chr2R 21666435 exon CG42364 + chr2R 21666497 exon CG42364 + chr2R 21666559 exon CG42364 + chr2R_4_21665001 chr2R_21665001 RAL-822 981 chr2R 21666444 21666479 chr2R 21666549 21666596 22 110 9.0 6.5 7.8 2.5 152 chr2R 21666444 exon CG42364 + chr2R 21666520 exon CG42364 + chr2R 21666596 intergenic CG42364 +,CG42365 +,CG42362 +,CG42363 + chr2R_22_21665001 chr2R_21665001 RAL-822 982 chr2R 21725202 21725218 chr2R 21725308 21725330 9 110 0.0 5.0 2.5 2.6 128 chr2R 21725202 intergenic not near genes chr2R 21725266 intergenic not near genes chr2R 21725330 intergenic not near genes chr2R_9_21725001 chr2R_21725001 RAL-822 983 chr2R 21738266 21738309 chr2R 21747442 21747478 roo 6 9166 0.5 1.5 1.0 3.0 9212 chr2R 21738266 intergenic not near genes chr2R 21742872 intergenic not near genes chr2R 21747478 intergenic not near genes chr2R_6_21740001 chr2R_21740001 RAL-822 984 chr2R 21753071 21753116 chr2R 21753567 21753612 roo 12 504 0.5 5.0 2.8 3.2 541 chr2R 21753071 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753612 intergenic not near genes chr2R_12_21750001 chr2R_21750001 RAL-822 985 chr2R 21759530 21759591 chr2R 21759646 21759712 12 104 2.0 3.0 2.5 3.4 182 chr2R 21759530 intergenic not near genes chr2R 21759621 intergenic not near genes chr2R 21759712 intergenic not near genes chr2R_12_21755001 chr2R_21755001 RAL-822 986 chr2R 21809492 21809514 chr2R 21817768 21817790 roo 5 8272 2.5 5.0 3.8 1.0 8298 chr2R 21809492 intergenic not near genes chr2R 21813641 intergenic not near genes chr2R 21817790 intergenic not near genes chr2R_5_21810001 chr2R_21810001 RAL-822 987 chr2R 21830190 21830243 chr2R 21830304 21830322 10 104 2.0 1.0 1.5 4.0 132 chr2R 21830190 intron CG13492 - chr2R 21830256 intron CG13492 - chr2R 21830322 intron CG13492 - chr2R_10_21830001 chr2R_21830001 RAL-822 988 chr2R 21886119 21886161 chr2R 21886218 21886290 8 111 4.5 0.0 2.2 2.5 171 chr2R 21886119 intron Fili + chr2R 21886204 intron Fili + chr2R 21886290 intron Fili + chr2R_8_21885001 chr2R_21885001 RAL-822 989 chr2R 21897783 21897802 chr2R 21897896 21897910 5 112 0.5 4.0 2.2 1.6 127 chr2R 21897783 intron Fili + chr2R 21897846 intron Fili + chr2R 21897910 intron Fili + chr2R_5_21895001 chr2R_21895001 RAL-822 990 chr2R 21906236 21906301 chr2R 21906372 21906437 16 131 4.0 1.5 2.8 4.2 201 chr2R 21906236 intron Fili + chr2R 21906336 intron Fili + chr2R 21906437 intron Fili + chr2R_16_21905001 chr2R_21905001 RAL-822 991 chr2R 21963168 21963228 chr2R 21963288 21963348 13 109 6.0 0.0 3.0 3.2 180 chr2R 21963168 intergenic not near genes chr2R 21963258 intergenic not near genes chr2R 21963348 intergenic not near genes chr2R_13_21960001 chr2R_21960001 RAL-822 992 chr2R 21985530 21985560 chr2R 21985630 21985671 13 109 2.5 2.5 2.5 3.7 141 chr2R 21985530 intergenic CG30401 - chr2R 21985600 intergenic CG30401 - chr2R 21985671 3` UTR CG30401 - chr2R_13_21985001 chr2R_21985001 RAL-822 993 chr2R 22003097 22003119 chr2R 22003188 22003223 4 103 2.0 4.5 3.2 1.0 126 chr2R 22003097 intron CG34370 - chr2R 22003160 intron CG34370 - chr2R 22003223 intron CG34370 - chr2R_4_22000001 chr2R_22000001 RAL-822 994 chr2R 22012960 22012996 chr2R 22013088 22013119 16 125 4.0 0.0 2.0 5.3 159 chr2R 22012960 intron CG34370 - chr2R 22013040 intron CG34370 - chr2R 22013119 intron CG34370 - chr2R_16_22010001 chr2R_22010001 RAL-822 995 chr2R 22072651 22072713 chr2R 22072771 22072805 11 114 4.0 4.0 4.0 2.2 154 chr2R 22072651 intron CG11474 - chr2R 22072728 intron CG11474 - chr2R 22072805 exon CG11474 - chr2R_11_22070001 chr2R_22070001 RAL-822 996 chr2R 22120791 22120812 chr2R 22121028 22121035 5 231 0.5 1.0 0.8 2.8 244 chr2R 22120791 intron Vrp1 - chr2R 22120913 intron Vrp1 - chr2R 22121035 intron Vrp1 - chr2R_5_22120001 chr2R_22120001 RAL-822 997 chr2R 22132260 22132278 chr2R 22132375 22132392 6 115 3.0 5.5 4.2 1.2 132 chr2R 22132260 intergenic not near genes chr2R 22132326 intergenic not near genes chr2R 22132392 intergenic not near genes chr2R_6_22130001 chr2R_22130001 RAL-822 998 chr2R 22185643 22185706 chr2R 22185777 22185840 4 131 1.0 0.5 0.8 2.2 197 chr2R 22185643 exon MED16 + chr2R 22185742 3` UTR MED16 + chr2R 22185840 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-822 999 chr2R 22189452 22189465 chr2R 22189574 22189589 6 138 3.0 0.5 1.8 2.1 137 chr2R 22189452 3` UTR Vps35 + chr2R 22189520 3` UTR Vps35 + chr2R 22189589 3` UTR Vps35 + chr2R_6_22185001 chr2R_22185001 RAL-822 1000 chr2R 22290057 22290074 chr2R 22290166 22290178 4 109 10.5 6.0 8.2 0.4 121 chr2R 22290057 intergenic not near genes chr2R 22290118 intergenic not near genes chr2R 22290178 intergenic not near genes chr2R_4_22290001 chr2R_22290001 RAL-822 1001 chr2R 22349693 22349722 chr2R 22351479 22351510 jockey 10 1804 5.0 3.0 4.0 2.0 1817 chr2R 22349693 intron Liprin-gamma - chr2R 22350602 intron Liprin-gamma - chr2R 22351510 intron Liprin-gamma - chr2R_10_22350001 chr2R_22350001 RAL-822 1002 chr2R 22360352 22360369 chr2R 22360820 22360830 jockey 5 464 9.5 4.0 6.8 0.6 478 chr2R 22360352 intron Liprin-gamma - chr2R 22360591 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-822 1003 chr2R 22411462 22411522 chr2R 22411575 22411593 13 102 4.5 5.5 5.0 2.2 131 chr2R 22411462 5` UTR qkr58E-3 - chr2R 22411528 5` UTR qkr58E-3 - chr2R 22411593 intergenic qkr58E-3 -,Mes4 + chr2R_13_22410001 chr2R_22410001 RAL-822 1004 chr2R 22499850 22499885 chr2R 22499934 22499971 9 90 0.5 2.0 1.2 4.1 121 chr2R 22499850 intron px - chr2R 22499910 intron px - chr2R 22499971 intron px - chr2R_9_22495001 chr2R_22495001 RAL-822 1005 chr2R 22503868 22503892 chr2R 22503972 22504022 9 123 0.0 5.0 2.5 2.6 154 chr2R 22503868 intron px - chr2R 22503945 intron px - chr2R 22504022 intron px - chr2R_9_22500001 chr2R_22500001 RAL-822 1006 chr2R 22506696 22506737 chr2R 22506796 22506849 9 103 2.5 3.0 2.8 2.4 153 chr2R 22506696 intron px - chr2R 22506772 intron px - chr2R 22506849 intron px - chr2R_9_22505001 chr2R_22505001 RAL-822 1007 chr2R 22545587 22545634 chr2R 22545701 22545731 11 110 5.0 4.0 4.5 2.0 144 chr2R 22545587 intron px - chr2R 22545659 intron px - chr2R 22545731 intron px - chr2R_11_22545001 chr2R_22545001 RAL-822 1008 chr2R 22575678 22575690 chr2R 22575750 22575759 8 93 0.0 2.5 1.2 3.6 81 chr2R 22575678 intron dnr1 - chr2R 22575718 intron dnr1 - chr2R 22575759 intron dnr1 - chr2R_8_22575001 chr2R_22575001 RAL-822 1009 chr2R 22580416 22580444 chr2R 22586601 22586629 diver 7 6181 5.5 1.5 3.5 1.6 6213 chr2R 22580416 intron dnr1 - chr2R 22583522 intron dnr1 - chr2R 22586629 intron dnr1 - chr2R_7_22580001 chr2R_22580001 RAL-822 1010 chr2R 22690403 22690454 chr2R 22690569 22690612 9 161 0.5 2.0 1.2 4.1 209 chr2R 22690403 intergenic CR44764 +,CR44763 + chr2R 22690508 5` UTR CR44764 + chr2R 22690612 5` UTR CR44764 + chr2R_9_22690001 chr2R_22690001 RAL-822 1011 chr2R 22769087 22769093 chr2R 22769215 22769221 4 128 14.0 6.0 10.0 0.4 134 chr2R 22769087 intron CG42260 - chr2R 22769154 intron CG42260 - chr2R 22769221 intron CG42260 - chr2R_4_22765001 chr2R_22765001 RAL-822 1012 chr2R 22769098 22769140 chr2R 22769206 22769217 8 111 7.5 3.5 5.5 1.2 119 chr2R 22769098 intron CG42260 - chr2R 22769158 intron CG42260 - chr2R 22769217 intron CG42260 - chr2R_8_22765001 chr2R_22765001 RAL-822 1013 chr2R 22774947 22774987 chr2R 22775385 22775436 jockey 13 441 6.0 5.5 5.8 1.9 489 chr2R 22774947 intron CG42260 - chr2R 22775192 intron CG42260 - chr2R 22775436 intron CG42260 - chr2R_13_22775001 chr2R_22775001 RAL-822 1014 chr2R 22789803 22789814 chr2R 22790114 22790135 5 318 5.5 7.5 6.5 0.7 332 chr2R 22789803 intron CG42260 - chr2R 22789969 intron CG42260 - chr2R 22790135 intron CG42260 - chr2R_5_22785001 chr2R_22785001 RAL-822 1015 chr2R 22789816 22789834 chr2R 22790105 22790128 7 304 3.0 6.0 4.5 1.3 312 chr2R 22789816 intron CG42260 - chr2R 22789972 intron CG42260 - chr2R 22790128 intron CG42260 - chr2R_7_22785001 chr2R_22785001 RAL-822 1016 chr2R 22842995 22843049 chr2R 22844992 22845039 flea 13 1996 5.5 4.0 4.8 2.2 2044 chr2R 22842995 intergenic CG9826 + chr2R 22844017 intergenic not near genes chr2R 22845039 intergenic not near genes chr2R_13_22840001 chr2R_22840001 RAL-822 1017 chr2R 22907408 22907424 chr2R 22907500 22907532 4 99 2.0 2.5 2.2 1.2 124 chr2R 22907408 intron nahoda + chr2R 22907470 intron nahoda + chr2R 22907532 intron nahoda + chr2R_4_22905001 chr2R_22905001 RAL-822 1018 chr2R 22945027 22945080 chr2R 22945168 22945207 17 140 5.0 7.0 6.0 2.4 180 chr2R 22945027 exon CG42694 + chr2R 22945117 3` UTR CG42694 + chr2R 22945207 intergenic CG42694 + chr2R_17_22945001 chr2R_22945001 RAL-822 1019 chr2R 22947178 22947200 chr2R 22947784 22947813 5 612 5.0 5.0 5.0 0.8 635 chr2R 22947178 intergenic not near genes chr2R 22947496 intergenic not near genes chr2R 22947813 intergenic not near genes chr2R_5_22945001 chr2R_22945001 RAL-822 1020 chr2R 22957032 22957061 chr2R 22957133 22957170 8 110 4.5 6.0 5.2 1.3 138 chr2R 22957032 intergenic CR44780 - chr2R 22957101 intergenic CR44780 - chr2R 22957170 intergenic CR44780 - chr2R_8_22955001 chr2R_22955001 RAL-822 1021 chr2R 22991596 22991653 chr2R 22991723 22991743 8 114 3.0 1.5 2.2 2.5 147 chr2R 22991596 intron twi + chr2R 22991670 intron twi + chr2R 22991743 intron twi + chr2R_8_22990001 chr2R_22990001 RAL-822 1022 chr2R 23029580 23029614 chr2R 23029692 23029709 7 105 5.5 6.5 6.0 1.0 129 chr2R 23029580 intron,intron twi +,CG42741 - chr2R 23029644 intron,intron twi +,CG42741 - chr2R 23029709 intron,intron twi +,CG42741 - chr2R_7_23025001 chr2R_23025001 RAL-822 1023 chr2R 23041168 23041190 chr2R 23041281 23041293 6 107 8.5 0.5 4.5 1.1 125 chr2R 23041168 intron,intron twi +,CG42741 - chr2R 23041230 intron,intron twi +,CG42741 - chr2R 23041293 intron,intron twi +,CG42741 - chr2R_6_23040001 chr2R_23040001 RAL-822 1024 chr2R 23131450 23131481 chr2R 23131588 23131619 10 136 6.5 6.0 6.2 1.4 169 chr2R 23131450 intergenic not near genes chr2R 23131534 intergenic not near genes chr2R 23131619 intergenic not near genes chr2R_10_23130001 chr2R_23130001 RAL-822 1025 chr2R 23131485 23131501 chr2R 23131574 23131624 7 124 2.5 3.5 3.0 1.8 139 chr2R 23131485 intergenic not near genes chr2R 23131554 intergenic not near genes chr2R 23131624 intergenic not near genes chr2R_7_23130001 chr2R_23130001 RAL-822 1026 chr2R 23188546 23188579 chr2R 23188639 23188678 6 100 3.0 3.0 3.0 1.5 132 chr2R 23188546 intron CG34371 - chr2R 23188612 intron CG34371 - chr2R 23188678 intron CG34371 - chr2R_6_23185001 chr2R_23185001 RAL-822 1027 chr2R 23275675 23275683 chr2R 23275750 23275756 6 84 3.5 5.0 4.2 1.2 81 chr2R 23275675 intergenic ord - chr2R 23275716 intergenic ord - chr2R 23275756 intergenic ord - chr2R_6_23275001 chr2R_23275001 RAL-822 1028 chr2R 23287813 23287852 chr2R 23287898 23287940 7 86 4.0 3.0 3.5 1.6 127 chr2R 23287813 intergenic not near genes chr2R 23287876 intergenic not near genes chr2R 23287940 intergenic not near genes chr2R_7_23285001 chr2R_23285001 RAL-822 1029 chr2R 23289051 23289078 chr2R 23289133 23289170 9 85 5.0 1.5 3.2 2.1 119 chr2R 23289051 intergenic not near genes chr2R 23289110 intergenic not near genes chr2R 23289170 intergenic not near genes chr2R_9_23285001 chr2R_23285001 RAL-822 1030 chr2R 23295410 23295439 chr2R 23295532 23295559 11 124 8.5 3.0 5.8 1.6 149 chr2R 23295410 intergenic not near genes chr2R 23295484 intergenic not near genes chr2R 23295559 intergenic not near genes chr2R_11_23295001 chr2R_23295001 RAL-822 1031 chr2R 23296771 23296794 chr2R 23296873 23296879 6 96 3.5 5.5 4.5 1.1 108 chr2R 23296771 intergenic not near genes chr2R 23296825 intergenic not near genes chr2R 23296879 intergenic not near genes chr2R_6_23295001 chr2R_23295001 RAL-822 1032 chr2R 23356255 23356296 chr2R 23356369 23356393 10 110 6.0 2.5 4.2 1.9 138 chr2R 23356255 3` UTR Rpi + chr2R 23356324 3` UTR Rpi + chr2R 23356393 3` UTR,3` UTR Rpi +,CG3500 - chr2R_10_23355001 chr2R_23355001 RAL-822 1033 chr2R 23402579 23402637 chr2R 23407686 23407745 flea 14 5106 4.5 5.0 4.8 2.4 5166 chr2R 23402579 intergenic CG3520 - chr2R 23405162 intergenic not near genes chr2R 23407745 intergenic not near genes chr2R_14_23405001 chr2R_23405001 RAL-822 1034 chr2R 23423725 23423736 chr2R 23423910 23423924 5 188 6.0 4.0 5.0 0.8 199 chr2R 23423725 intron CG9815 - chr2R 23423824 intron CG9815 - chr2R 23423924 intron CG9815 - chr2R_5_23420001 chr2R_23420001 RAL-822 1035 chr2R 23423739 23423763 chr2R 23423906 23423956 7 183 3.5 3.5 3.5 1.6 217 chr2R 23423739 intron CG9815 - chr2R 23423848 intron CG9815 - chr2R 23423956 intron CG9815 - chr2R_7_23420001 chr2R_23420001 RAL-822 1036 chr2R 23493653 23493695 chr2R 23493758 23493781 5 102 4.0 4.5 4.2 1.0 128 chr2R 23493653 intergenic not near genes chr2R 23493717 intergenic not near genes chr2R 23493781 intergenic not near genes chr2R_5_23490001 chr2R_23490001 RAL-822 1037 chr2R 23563867 23563921 chr2R 23563981 23564021 12 109 6.0 4.5 5.2 1.9 154 chr2R 23563867 3` UTR Pi3K59F + chr2R 23563944 3` UTR Pi3K59F + chr2R 23564021 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_12_23560001 chr2R_23560001 RAL-822 1038 chr2R 23594833 23594853 chr2R 23595053 23595098 12 233 7.0 1.0 4.0 2.4 265 chr2R 23594833 intron apt + chr2R 23594966 intron apt + chr2R 23595098 intron apt + chr2R_12_23590001 chr2R_23590001 RAL-822 1039 chr2R 23607005 23607193 chr2R 23607120 23607321 28 114 2.5 2.0 2.2 8.8 316 chr2R 23607005 intron CG17664 - chr2R 23607163 intron CG17664 - chr2R 23607321 intron CG17664 - chr2R_28_23605001 chr2R_23605001 RAL-822 1040 chr2R 23635667 23635706 chr2R 23635777 23635801 6 101 4.5 1.0 2.8 1.6 134 chr2R 23635667 intron retn + chr2R 23635734 intron retn + chr2R 23635801 intron retn + chr2R_6_23635001 chr2R_23635001 RAL-822 1041 chr2R 23747303 23747320 chr2R 23748965 23748966 5 1658 24.5 10.0 17.2 0.3 1663 chr2R 23747303 intergenic CG13560 +,egl - chr2R 23748134 exon CG13560 + chr2R 23748966 intergenic CG12491 -,CG34105 -,CG13560 + chr2R_5_23745001 chr2R_23745001 RAL-822 1042 chr2R 23771276 23771294 chr2R 23771389 23771401 6 110 7.5 2.5 5.0 1.0 125 chr2R 23771276 intron CG9850 - chr2R 23771338 intron CG9850 - chr2R 23771401 intron CG9850 - chr2R_6_23770001 chr2R_23770001 RAL-822 1043 chr2R 23799208 23799247 chr2R 23799309 23799366 9 107 6.5 0.5 3.5 2.0 158 chr2R 23799208 intergenic not near genes chr2R 23799287 intergenic not near genes chr2R 23799366 intergenic not near genes chr2R_9_23795001 chr2R_23795001 RAL-822 1044 chr2R 23986489 23986545 chr2R 23986592 23986650 11 110 2.5 4.0 3.2 2.6 161 chr2R 23986489 intron Phm - chr2R 23986570 intron Phm - chr2R 23986650 intron,5` UTR Phm -,CG30178 + chr2R_11_23985001 chr2R_23985001 RAL-822 1045 chr2R 23995181 23995244 chr2R 23995380 23995433 20 196 1.0 4.5 2.8 5.3 252 chr2R 23995181 intergenic CG3860 -,Unc-89 - chr2R 23995307 intergenic Unc-89 -,CG3860 - chr2R 23995433 intergenic Unc-89 -,CG3860 - chr2R_20_23995001 chr2R_23995001 RAL-822 1046 chr2R 24031358 24031412 chr2R 24031472 24031503 15 112 7.5 7.0 7.2 1.8 145 chr2R 24031358 5` UTR CG30172 - chr2R 24031430 intergenic CG30172 -,Chi - chr2R 24031503 intergenic Chi -,CG30172 - chr2R_15_24030001 chr2R_24030001 RAL-822 1047 chr2R 24177199 24177259 chr2R 24184719 24184762 412 29 7515 8.0 8.0 8.0 3.2 7563 chr2R 24177199 3` UTR Nop60B + chr2R 24180980 intron Nop60B + chr2R 24184762 3` UTR Nop60B + chr2R_29_24180001 chr2R_24180001 RAL-822 1048 chr2R 24292823 24292850 chr2R 24292913 24292962 8 105 2.5 4.0 3.2 1.9 139 chr2R 24292823 intergenic not near genes chr2R 24292892 intergenic not near genes chr2R 24292962 intergenic not near genes chr2R_8_24290001 chr2R_24290001 RAL-822 1049 chr2R 24351378 24351437 chr2R 24351494 24351553 7 115 2.5 2.0 2.2 2.2 175 chr2R 24351378 intron,5` UTR bs +,CG44812 - chr2R 24351466 intron bs + chr2R 24351553 intron,3` UTR bs +,CR44811 - chr2R_7_24350001 chr2R_24350001 RAL-822 1050 chr2R 24353425 24353452 chr2R 24361796 24361829 roo 5 8374 2.5 2.0 2.2 1.6 8404 chr2R 24353425 intron,intron bs +,CR44811 - chr2R 24357627 intron,intron bs +,CR44811 - chr2R 24361829 intron,intron bs +,CR44811 - chr2R_5_24355001 chr2R_24355001 RAL-822 1051 chr2R 24383791 24383842 chr2R 24383907 24383948 8 108 5.0 1.5 3.2 1.9 157 chr2R 24383791 intron mAChR-A - chr2R 24383870 intron mAChR-A - chr2R 24383948 exon mAChR-A - chr2R_8_24380001 chr2R_24380001 RAL-822 1052 chr2R 24548895 24548917 chr2R 24549014 24549014 4 109 6.5 2.0 4.2 0.8 119 chr2R 24548895 intron,intron CG4622 -,ITP + chr2R 24548954 intron,intron CG4622 -,ITP + chr2R 24549014 intron,intron CG4622 -,ITP + chr2R_4_24545001 chr2R_24545001 RAL-822 1053 chr2R 24548934 24548953 chr2R 24549005 24549025 4 75 2.0 1.5 1.8 1.4 91 chr2R 24548934 intron,intron CG4622 -,ITP + chr2R 24548980 intron,intron CG4622 -,ITP + chr2R 24549025 intron,intron CG4622 -,ITP + chr2R_4_24545001 chr2R_24545001 RAL-822 1054 chr2R 24647556 24647611 chr2R 24655160 24655203 412 4 7598 0.0 4.5 2.2 1.2 7647 chr2R 24647556 intergenic not near genes chr2R 24651380 intergenic not near genes chr2R 24655203 intergenic not near genes chr2R_4_24650001 chr2R_24650001 RAL-822 1055 chr2R 24660361 24660380 chr2R 24660453 24660491 4 104 9.5 5.5 7.5 0.5 130 chr2R 24660361 intergenic not near genes chr2R 24660426 intergenic not near genes chr2R 24660491 intergenic not near genes chr2R_4_24660001 chr2R_24660001 RAL-822 1056 chr2R 24727874 24727916 chr2R 24735395 24735425 mdg1 10 7516 1.0 3.5 2.2 3.1 7551 chr2R 24727874 intron Mid1 - chr2R 24731650 intron Mid1 - chr2R 24735425 intron Mid1 - chr2R_10_24730001 chr2R_24730001 RAL-822 1057 chr2R 24763616 24763644 chr2R 24765584 24765618 G2 4 1971 1.5 1.0 1.2 1.8 2002 chr2R 24763616 exon CG3894 + chr2R 24764617 intron CG3894 + chr2R 24765618 exon CG3894 + chr2R_4_24760001 chr2R_24760001 RAL-822 1058 chr2R 24813406 24813439 chr2R 24813521 24813551 7 121 2.0 1.5 1.8 2.5 145 chr2R 24813406 intergenic not near genes chr2R 24813478 intergenic not near genes chr2R 24813551 intergenic not near genes chr2R_7_24810001 chr2R_24810001 RAL-822 1059 chr2R 24856563 24856594 chr2R 24856931 24856967 7 372 5.0 1.5 3.2 1.7 404 chr2R 24856563 intergenic not near genes chr2R 24856765 intergenic not near genes chr2R 24856967 intergenic not near genes chr2R_7_24855001 chr2R_24855001 RAL-822 1060 chr2R 24884029 24884073 chr2R 24884146 24884190 12 114 2.5 5.0 3.8 2.5 161 chr2R 24884029 intron NKAIN + chr2R 24884110 intron NKAIN + chr2R 24884190 intron NKAIN + chr2R_12_24880001 chr2R_24880001 RAL-822 1061 chr2R 25014541 25014569 chr2R 25014625 25014680 6 95 1.0 4.0 2.5 1.7 139 chr2R 25014541 intron uzip + chr2R 25014610 intron uzip + chr2R 25014680 intron uzip + chr2R_6_25010001 chr2R_25010001 RAL-822 1062 chr2R 25016579 25016590 chr2R 25016846 25016877 4 290 3.0 1.5 2.2 1.2 298 chr2R 25016579 intron uzip + chr2R 25016728 intron uzip + chr2R 25016877 intron uzip + chr2R_4_25015001 chr2R_25015001 RAL-822 1063 chr2R 25018316 25018370 chr2R 25018442 25018475 16 123 0.5 5.0 2.8 4.2 159 chr2R 25018316 intron uzip + chr2R 25018396 intron uzip + chr2R 25018475 intron uzip + chr2R_16_25015001 chr2R_25015001 RAL-822 1064 chr2R 25022607 25022673 chr2R 25022726 25022791 29 113 5.0 9.0 7.0 3.6 184 chr2R 25022607 intron uzip + chr2R 25022699 intron uzip + chr2R 25022791 intron uzip + chr2R_29_25020001 chr2R_25020001 RAL-822 1065 chr2R 25130984 25131040 chr2R 25131086 25131119 11 94 5.0 4.0 4.5 2.0 135 chr2R 25130984 intron lov - chr2R 25131052 intron lov - chr2R 25131119 intron lov - chr2R_11_25130001 chr2R_25130001 RAL-822 1066 chr2R 25141639 25141681 chr2R 25159339 25159341 roo 20 17701 3.5 3.5 3.5 4.4 17702 chr2R 25141639 intergenic not near genes chr2R 25150490 intergenic not near genes chr2R 25159341 intergenic not near genes chr2R_20_25150001 chr2R_25150001 RAL-822 1067 chr2R 25159356 25159404 chr2R 25159578 25159627 13 218 2.5 5.0 3.8 2.7 271 chr2R 25159356 intergenic not near genes chr2R 25159492 intergenic not near genes chr2R 25159627 intergenic not near genes chr2R_13_25155001 chr2R_25155001 RAL-822 1068 chr2R 25165381 25165407 chr2R 25165494 25165506 4 106 3.5 0.5 2.0 1.3 125 chr2R 25165381 intergenic not near genes chr2R 25165444 intergenic not near genes chr2R 25165506 intergenic not near genes chr2R_4_25165001 chr2R_25165001 RAL-822 1069 chr2R 25213662 25213711 chr2R 25213767 25213816 19 99 4.0 7.0 5.5 2.9 154 chr2R 25213662 intron CG9380 - chr2R 25213739 intron CG9380 - chr2R 25213816 intron CG9380 - chr2R_19_25210001 chr2R_25210001 RAL-822 1070 chr2R 25224647 25224693 chr2R 25224758 25224804 10 109 3.0 7.0 5.0 1.7 157 chr2R 25224647 intron CG9380 - chr2R 25224726 intron CG9380 - chr2R 25224804 intron CG9380 - chr2R_10_25220001 chr2R_25220001 RAL-822 1071 chr3L 110178 110233 chr3L 119380 119435 roo 18 9193 5.0 1.5 3.2 4.3 9257 chr3L 110178 intergenic not near genes chr3L 114806 intergenic not near genes chr3L 119435 intergenic not near genes chr3L_18_110001 chr3L_110001 RAL-822 1072 chr3L 402697 402716 chr3L 409746 409768 297 9 7070 1.5 7.0 4.2 1.7 7071 chr3L 402697 intergenic not near genes chr3L 406232 intergenic not near genes chr3L 409768 intergenic not near genes chr3L_9_405001 chr3L_405001 RAL-822 1073 chr3L 477856 477897 chr3L 477974 478005 12 114 3.0 0.0 1.5 4.8 149 chr3L 477856 intron klar - chr3L 477930 intron klar - chr3L 478005 intron klar - chr3L_12_475001 chr3L_475001 RAL-822 1074 chr3L 514247 514254 chr3L 514359 514366 4 111 10.0 4.0 7.0 0.5 119 chr3L 514247 intron klar - chr3L 514306 intron klar - chr3L 514366 intron klar - chr3L_4_510001 chr3L_510001 RAL-822 1075 chr3L 514255 514303 chr3L 514356 514405 12 106 3.0 3.5 3.2 2.9 150 chr3L 514255 intron klar - chr3L 514330 intron klar - chr3L 514405 intron klar - chr3L_12_510001 chr3L_510001 RAL-822 1076 chr3L 642454 642498 chr3L 642560 642583 7 104 4.0 3.0 3.5 1.6 129 chr3L 642454 5` UTR CR43334 + chr3L 642518 5` UTR CR43334 + chr3L 642583 5` UTR CR43334 + chr3L_7_640001 chr3L_640001 RAL-822 1077 chr3L 705881 705928 chr3L 706001 706034 17 127 6.5 10.0 8.2 1.8 153 chr3L 705881 intergenic CG13895 -,CR44514 + chr3L 705958 3` UTR CG13895 - chr3L 706034 3` UTR CG13895 - chr3L_17_705001 chr3L_705001 RAL-822 1078 chr3L 789877 789930 chr3L 790397 790420 roo 11 517 3.5 3.0 3.2 2.6 543 chr3L 789877 intergenic not near genes chr3L 790148 intergenic not near genes chr3L 790420 intergenic not near genes chr3L_11_790001 chr3L_790001 RAL-822 1079 chr3L 858001 858025 chr3L 866485 866500 Tirant 4 8479 5.0 3.5 4.2 0.8 8499 chr3L 858001 intergenic not near genes chr3L 862250 intergenic not near genes chr3L 866500 5` UTR CG12502 + chr3L_4_860001 chr3L_860001 RAL-822 1080 chr3L 900001 900019 chr3L 900120 900130 4 117 0.0 7.5 3.8 0.8 129 chr3L 900001 intergenic not near genes chr3L 900066 intergenic not near genes chr3L 900130 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-822 1081 chr3L 925150 925157 chr3L 932609 932618 mdg1 4 7460 15.0 6.0 10.5 0.3 7468 chr3L 925150 intron Glut1 + chr3L 928884 intron Glut1 + chr3L 932618 intron Glut1 + chr3L_4_925001 chr3L_925001 RAL-822 1082 chr3L 925160 925195 chr3L 932600 932656 mdg1 13 7452 7.5 4.5 6.0 1.9 7496 chr3L 925160 intron Glut1 + chr3L 928908 intron Glut1 + chr3L 932656 intron Glut1 + chr3L_13_925001 chr3L_925001 RAL-822 1083 chr3L 933874 933941 chr3L 934013 934050 15 133 6.0 4.0 5.0 2.5 176 chr3L 933874 intron Glut1 + chr3L 933962 intron Glut1 + chr3L 934050 intron Glut1 + chr3L_15_930001 chr3L_930001 RAL-822 1084 chr3L 947741 947753 chr3L 947820 947873 4 100 3.0 3.5 3.2 1.0 132 chr3L 947741 intron Glut1 + chr3L 947807 intron Glut1 + chr3L 947873 intron Glut1 + chr3L_4_945001 chr3L_945001 RAL-822 1085 chr3L 1000259 1000295 chr3L 1000362 1000402 5 108 5.5 2.0 3.8 1.0 143 chr3L 1000259 intron trio - chr3L 1000330 intron trio - chr3L 1000402 intron trio - chr3L_5_1000001 chr3L_1000001 RAL-822 1086 chr3L 1033330 1033341 chr3L 1033461 1033472 6 130 0.0 0.0 0.0 6.0 142 chr3L 1033330 intron trio - chr3L 1033401 intron trio - chr3L 1033472 intron trio - chr3L_6_1030001 chr3L_1030001 RAL-822 1087 chr3L 1040517 1040533 chr3L 1040636 1040652 6 117 6.0 0.0 3.0 1.5 135 chr3L 1040517 intron bab1 - chr3L 1040584 intron bab1 - chr3L 1040652 intron bab1 - chr3L_6_1040001 chr3L_1040001 RAL-822 1088 chr3L 1040535 1040566 chr3L 1040632 1040660 11 107 3.5 0.0 1.8 3.9 125 chr3L 1040535 intron bab1 - chr3L 1040598 intron bab1 - chr3L 1040660 intron bab1 - chr3L_11_1040001 chr3L_1040001 RAL-822 1089 chr3L 1075488 1075497 chr3L 1075565 1075613 6 95 2.0 5.0 3.5 1.3 125 chr3L 1075488 intron bab1 - chr3L 1075550 intron bab1 - chr3L 1075613 intron bab1 - chr3L_6_1075001 chr3L_1075001 RAL-822 1090 chr3L 1109603 1109666 chr3L 1109724 1109752 10 100 3.5 3.5 3.5 2.2 149 chr3L 1109603 intergenic not near genes chr3L 1109678 intergenic not near genes chr3L 1109752 intergenic not near genes chr3L_10_1105001 chr3L_1105001 RAL-822 1091 chr3L 1145230 1145258 chr3L 1145332 1145353 4 102 7.0 4.0 5.5 0.6 123 chr3L 1145230 intron bab2 - chr3L 1145292 intron bab2 - chr3L 1145353 intron bab2 - chr3L_4_1145001 chr3L_1145001 RAL-822 1092 chr3L 1219598 1219624 chr3L 1227335 1227337 412 6 7739 1.5 3.0 2.2 1.9 7739 chr3L 1219598 intron mwh + chr3L 1223468 intron mwh + chr3L 1227337 intron mwh + chr3L_6_1220001 chr3L_1220001 RAL-822 1093 chr3L 1260107 1260164 chr3L 1260222 1260278 19 107 1.5 1.5 1.5 7.6 171 chr3L 1260107 intron CG9134 + chr3L 1260192 intron CG9134 + chr3L 1260278 intron CG9134 + chr3L_19_1260001 chr3L_1260001 RAL-822 1094 chr3L 1284014 1284044 chr3L 1284132 1284173 4 124 5.0 2.5 3.8 0.8 159 chr3L 1284014 intron CG32333 + chr3L 1284094 intron CG32333 + chr3L 1284173 intron CG32333 + chr3L_4_1280001 chr3L_1280001 RAL-822 1095 chr3L 1310983 1311009 chr3L 1315833 1315875 11 4860 15.0 25.0 20.0 0.5 4892 chr3L 1310983 exon CG2469 + chr3L 1313429 intergenic CG9186 -,CG9153 + chr3L 1315875 exon CG9153 + chr3L_11_1310001 chr3L_1310001 RAL-822 1096 chr3L 1324629 1324658 chr3L 1324737 1324763 8 99 4.5 12.0 8.2 0.9 134 chr3L 1324629 intron Myo61F + chr3L 1324696 intron Myo61F + chr3L 1324763 intron Myo61F + chr3L_8_1320001 chr3L_1320001 RAL-822 1097 chr3L 1364019 1364060 chr3L 1364127 1364181 5 114 0.0 4.0 2.0 1.7 162 chr3L 1364019 intron Ptp61F - chr3L 1364100 intron Ptp61F - chr3L 1364181 intron Ptp61F - chr3L_5_1360001 chr3L_1360001 RAL-822 1098 chr3L 1396723 1396747 chr3L 1396822 1396832 6 101 5.0 3.0 4.0 1.2 109 chr3L 1396723 intron Ptp61F - chr3L 1396778 intron Ptp61F - chr3L 1396832 intron Ptp61F - chr3L_6_1395001 chr3L_1395001 RAL-822 1099 chr3L 1505979 1506020 chr3L 1513600 1513639 17.6 9 7618 4.0 2.0 3.0 2.2 7660 chr3L 1505979 intron,intron Psa +,cue - chr3L 1509809 intron,intron Psa +,cue - chr3L 1513639 intron,intron Psa +,cue - chr3L_9_1505001 chr3L_1505001 RAL-822 1100 chr3L 1569509 1569531 chr3L 1569600 1569631 5 92 3.0 8.0 5.5 0.8 122 chr3L 1569509 5` UTR CG12004 + chr3L 1569570 intron CG12004 + chr3L 1569631 intron CG12004 + chr3L_5_1565001 chr3L_1565001 RAL-822 1101 chr3L 1583077 1583106 chr3L 1583182 1583224 10 127 3.0 3.0 3.0 2.5 147 chr3L 1583077 intron CG13917 + chr3L 1583150 intron CG13917 + chr3L 1583224 intron CG13917 + chr3L_10_1580001 chr3L_1580001 RAL-822 1102 chr3L 1585912 1585928 chr3L 1586018 1586037 5 110 2.5 3.0 2.8 1.3 125 chr3L 1585912 intron CG13917 + chr3L 1585974 intron CG13917 + chr3L 1586037 intron CG13917 + chr3L_5_1585001 chr3L_1585001 RAL-822 1103 chr3L 1740851 1740879 chr3L 1741107 1741156 pogo 11 263 5.5 2.5 4.0 2.2 305 chr3L 1740851 intron Gk + chr3L 1741004 intron Gk + chr3L 1741156 intron Gk + chr3L_11_1740001 chr3L_1740001 RAL-822 1104 chr3L 1805678 1805703 chr3L 1805874 1805912 6 204 2.5 1.5 2.0 2.0 234 chr3L 1805678 exon CG42676 + chr3L 1805795 intron CG42676 + chr3L 1805912 intron CG42676 + chr3L_6_1805001 chr3L_1805001 RAL-822 1105 chr3L 2139173 2139227 chr3L 2139286 2139328 9 108 4.5 3.0 3.8 1.9 155 chr3L 2139173 intron zormin - chr3L 2139250 intron zormin - chr3L 2139328 intron zormin - chr3L_9_2135001 chr3L_2135001 RAL-822 1106 chr3L 2156044 2156114 chr3L 2156171 2156241 5 118 1.0 0.0 0.5 3.3 197 chr3L 2156044 intron CG15822 - chr3L 2156142 intron CG15822 - chr3L 2156241 intron CG15822 - chr3L_5_2155001 chr3L_2155001 RAL-822 1107 chr3L 2278745 2278782 chr3L 2279010 2279071 6 278 2.5 3.0 2.8 1.6 326 chr3L 2278745 intergenic not near genes chr3L 2278908 intergenic not near genes chr3L 2279071 intergenic not near genes chr3L_6_2275001 chr3L_2275001 RAL-822 1108 chr3L 2308005 2308027 chr3L 2308111 2308143 6 125 7.0 3.5 5.2 1.0 138 chr3L 2308005 intergenic not near genes chr3L 2308074 intergenic not near genes chr3L 2308143 intergenic not near genes chr3L_6_2305001 chr3L_2305001 RAL-822 1109 chr3L 2382695 2382715 chr3L 2382787 2382812 4 95 4.0 4.5 4.2 0.8 117 chr3L 2382695 intergenic not near genes chr3L 2382754 intergenic not near genes chr3L 2382812 intergenic not near genes chr3L_4_2380001 chr3L_2380001 RAL-822 1110 chr3L 2401141 2401168 chr3L 2401255 2401271 6 115 2.0 6.5 4.2 1.2 130 chr3L 2401141 intron CG45186 + chr3L 2401206 intron CG45186 + chr3L 2401271 intron CG45186 + chr3L_6_2400001 chr3L_2400001 RAL-822 1111 chr3L 2447500 2447536 chr3L 2456662 2456682 roo 4 9164 3.0 1.5 2.2 1.2 9182 chr3L 2447500 intron CG45186 + chr3L 2452091 intron CG45186 + chr3L 2456682 intron CG45186 + chr3L_4_2450001 chr3L_2450001 RAL-822 1112 chr3L 2467470 2467483 chr3L 2467591 2467600 5 127 0.0 5.5 2.8 1.3 130 chr3L 2467470 intron CG45186 + chr3L 2467535 intron CG45186 + chr3L 2467600 intron CG45186 + chr3L_5_2465001 chr3L_2465001 RAL-822 1113 chr3L 2493796 2493848 chr3L 2493909 2493971 4 120 1.0 0.0 0.5 2.7 175 chr3L 2493796 intron CG45186 + chr3L 2493884 intron CG45186 + chr3L 2493971 intron CG45186 + chr3L_4_2490001 chr3L_2490001 RAL-822 1114 chr3L 2498710 2498758 chr3L 2498895 2498951 13 184 1.5 4.0 2.8 3.4 241 chr3L 2498710 3` UTR CG45186 + chr3L 2498830 3` UTR CG45186 + chr3L 2498951 3` UTR CG45186 + chr3L_13_2495001 chr3L_2495001 RAL-822 1115 chr3L 2534576 2534635 chr3L 2534695 2534732 7 106 0.0 0.5 0.2 5.8 156 chr3L 2534576 intron Spn - chr3L 2534654 intron Spn - chr3L 2534732 exon Spn - chr3L_7_2530001 chr3L_2530001 RAL-822 1116 chr3L 2546752 2546793 chr3L 2546851 2546883 7 109 5.5 3.5 4.5 1.3 131 chr3L 2546752 intron Spn - chr3L 2546818 intron Spn - chr3L 2546883 intron Spn - chr3L_7_2545001 chr3L_2545001 RAL-822 1117 chr3L 2554035 2554086 chr3L 2554145 2554161 13 106 4.0 0.0 2.0 4.3 126 chr3L 2554035 intron Spn - chr3L 2554098 5` UTR Spn - chr3L 2554161 5` UTR Spn - chr3L_13_2550001 chr3L_2550001 RAL-822 1118 chr3L 2561518 2561558 chr3L 2561610 2561670 12 99 4.0 2.5 3.2 2.9 152 chr3L 2561518 intron msn - chr3L 2561594 intron msn - chr3L 2561670 intron msn - chr3L_12_2560001 chr3L_2560001 RAL-822 1119 chr3L 2631040 2631086 chr3L 2631175 2631221 8 136 2.0 1.5 1.8 2.9 181 chr3L 2631040 intergenic CR45660 - chr3L 2631130 intergenic CR45660 - chr3L 2631221 intergenic CG42245 +,MEP-1 + chr3L_8_2630001 chr3L_2630001 RAL-822 1120 chr3L 2683928 2683975 chr3L 2684022 2684079 21 105 4.0 5.0 4.5 3.8 151 chr3L 2683928 intron Fife - chr3L 2684004 intron Fife - chr3L 2684079 intron Fife - chr3L_21_2680001 chr3L_2680001 RAL-822 1121 chr3L 2719509 2719559 chr3L 2719646 2719696 6 123 4.0 3.0 3.5 1.3 187 chr3L 2719509 3` UTR Mrtf - chr3L 2719602 3` UTR Mrtf - chr3L 2719696 3` UTR Mrtf - chr3L_6_2715001 chr3L_2715001 RAL-822 1122 chr3L 2751446 2751463 chr3L 2755755 2755793 F-element 5 4321 10.5 7.0 8.8 0.5 4347 chr3L 2751446 intron Mrtf - chr3L 2753620 intron Mrtf - chr3L 2755793 intron Mrtf - chr3L_5_2750001 chr3L_2750001 RAL-822 1123 chr3L 2795701 2795744 chr3L 2795859 2795889 10 150 5.0 6.5 5.8 1.5 188 chr3L 2795701 intron CG43444 - chr3L 2795795 intron CG43444 - chr3L 2795889 intron CG43444 - chr3L_10_2795001 chr3L_2795001 RAL-822 1124 chr3L 2864538 2864557 chr3L 2864668 2864682 4 127 6.0 5.0 5.5 0.6 144 chr3L 2864538 intron CG43444 - chr3L 2864610 intron CG43444 - chr3L 2864682 intron CG43444 - chr3L_4_2860001 chr3L_2860001 RAL-822 1125 chr3L 2927818 2927872 chr3L 2936123 2936178 Tirant 6 8300 3.5 7.0 5.2 1.0 8360 chr3L 2927818 intron Shab + chr3L 2931998 intron Shab + chr3L 2936178 intron Shab + chr3L_6_2930001 chr3L_2930001 RAL-822 1126 chr3L 2966689 2966712 chr3L 2974149 2974162 mdg1 10 7456 5.0 0.5 2.8 2.6 7473 chr3L 2966689 intergenic not near genes chr3L 2970426 intergenic not near genes chr3L 2974162 intergenic not near genes chr3L_10_2970001 chr3L_2970001 RAL-822 1127 chr3L 2987728 2987741 chr3L 2988003 2988010 4 274 4.0 3.5 3.8 0.8 282 chr3L 2987728 intergenic not near genes chr3L 2987869 intergenic not near genes chr3L 2988010 intergenic not near genes chr3L_4_2985001 chr3L_2985001 RAL-822 1128 chr3L 3028313 3028343 chr3L 3028421 3028432 6 96 6.5 3.0 4.8 1.0 119 chr3L 3028313 intergenic not near genes chr3L 3028372 intergenic not near genes chr3L 3028432 intergenic not near genes chr3L_6_3025001 chr3L_3025001 RAL-822 1129 chr3L 3040314 3040352 chr3L 3042117 3042175 S-element 4 1816 2.5 0.5 1.5 1.6 1861 chr3L 3040314 3` UTR CG2162 + chr3L 3041244 intergenic not near genes chr3L 3042175 intergenic Jafrac2 + chr3L_4_3040001 chr3L_3040001 RAL-822 1130 chr3L 3051722 3051755 chr3L 3051999 3052009 pogo 9 265 7.0 2.5 4.8 1.6 287 chr3L 3051722 3` UTR CG32485 + chr3L 3051866 intergenic CG32485 + chr3L 3052009 intergenic CG32485 + chr3L_9_3050001 chr3L_3050001 RAL-822 1131 chr3L 3252351 3252373 chr3L 3252416 3252484 4 100 5.0 1.0 3.0 1.0 133 chr3L 3252351 5` UTR CR43626 + chr3L 3252418 5` UTR CR43626 + chr3L 3252484 5` UTR CR43626 + chr3L_4_3250001 chr3L_3250001 RAL-822 1132 chr3L 3263798 3263817 chr3L 3263892 3263925 7 107 0.0 7.0 3.5 1.6 127 chr3L 3263798 intron ckd + chr3L 3263862 intron ckd + chr3L 3263925 intron ckd + chr3L_7_3260001 chr3L_3260001 RAL-822 1133 chr3L 3281433 3281471 chr3L 3281944 3281979 Doc 7 512 2.0 7.0 4.5 1.3 546 chr3L 3281433 intron CG12017 + chr3L 3281706 intron CG12017 + chr3L 3281979 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-822 1134 chr3L 3294111 3294142 chr3L 3294227 3294267 10 123 2.0 2.5 2.2 3.1 156 chr3L 3294111 intron CG12009 + chr3L 3294189 intron CG12009 + chr3L 3294267 intron CG12009 + chr3L_10_3290001 chr3L_3290001 RAL-822 1135 chr3L 3310275 3310324 chr3L 3310371 3310438 12 102 6.0 5.5 5.8 1.8 163 chr3L 3310275 intron ZnT63C + chr3L 3310356 intron ZnT63C + chr3L 3310438 intron ZnT63C + chr3L_12_3310001 chr3L_3310001 RAL-822 1136 chr3L 3317509 3317515 chr3L 3317615 3317629 4 112 0.0 3.5 1.8 1.4 120 chr3L 3317509 intergenic Drsl5 + chr3L 3317569 intergenic Drsl5 +,PIG-C - chr3L 3317629 intergenic PIG-C -,Drsl5 + chr3L_4_3315001 chr3L_3315001 RAL-822 1137 chr3L 3317519 3317555 chr3L 3317613 3317641 17 106 0.0 3.5 1.8 6.1 122 chr3L 3317519 intergenic Drsl5 + chr3L 3317580 intergenic Drsl5 +,PIG-C - chr3L 3317641 intergenic PIG-C -,Drsl5 + chr3L_17_3315001 chr3L_3315001 RAL-822 1138 chr3L 3431912 3431968 chr3L 3432038 3432052 15 109 1.5 1.5 1.5 6.0 140 chr3L 3431912 intron eIF5B - chr3L 3431982 intron eIF5B - chr3L 3432052 intron eIF5B - chr3L_15_3430001 chr3L_3430001 RAL-822 1139 chr3L 3436264 3436315 chr3L 3436378 3436417 12 113 4.0 4.5 4.2 2.3 153 chr3L 3436264 intron eIF5B - chr3L 3436340 intron eIF5B - chr3L 3436417 intron eIF5B - chr3L_12_3435001 chr3L_3435001 RAL-822 1140 chr3L 3484258 3484315 chr3L 3484385 3484442 7 125 7.0 2.5 4.8 1.2 184 chr3L 3484258 intron,exon CG42324 +,CG43074 - chr3L 3484350 intron,exon CG42324 +,CG43074 - chr3L 3484442 intron,intron CG42324 +,CG43074 - chr3L_7_3480001 chr3L_3480001 RAL-822 1141 chr3L 3512930 3512942 chr3L 3513044 3513050 4 112 8.0 7.0 7.5 0.5 120 chr3L 3512930 intergenic ImpE2 - chr3L 3512990 intergenic ImpE2 - chr3L 3513050 intergenic ImpE2 - chr3L_4_3510001 chr3L_3510001 RAL-822 1142 chr3L 3512943 3512980 chr3L 3513039 3513094 4 109 2.0 6.0 4.0 0.8 151 chr3L 3512943 intergenic ImpE2 - chr3L 3513018 intergenic ImpE2 - chr3L 3513094 intergenic ImpE2 - chr3L_4_3510001 chr3L_3510001 RAL-822 1143 chr3L 3574649 3574712 chr3L 3575425 3575432 8 743 3.0 4.5 3.8 1.7 783 chr3L 3574649 intron Eip63E + chr3L 3575040 intron Eip63E + chr3L 3575432 intron Eip63E + chr3L_8_3575001 chr3L_3575001 RAL-822 1144 chr3L 3581713 3581770 chr3L 3581831 3581890 6 117 4.5 2.5 3.5 1.3 177 chr3L 3581713 intron Eip63E + chr3L 3581802 intron Eip63E + chr3L 3581890 intron Eip63E + chr3L_6_3580001 chr3L_3580001 RAL-822 1145 chr3L 3601281 3601319 chr3L 3606610 3606653 copia 7 5333 3.0 4.5 3.8 1.5 5372 chr3L 3601281 intron Eip63E + chr3L 3603967 intron Eip63E + chr3L 3606653 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-822 1146 chr3L 3642134 3642187 chr3L 3642260 3642328 13 133 4.5 4.0 4.2 2.5 194 chr3L 3642134 intron dar1 + chr3L 3642231 intron dar1 + chr3L 3642328 intron dar1 + chr3L_13_3640001 chr3L_3640001 RAL-822 1147 chr3L 3709419 3709464 chr3L 3709539 3709559 7 102 1.0 1.5 1.2 3.2 140 chr3L 3709419 intergenic CR45675 + chr3L 3709489 intergenic CR45675 + chr3L 3709559 intergenic not near genes chr3L_7_3705001 chr3L_3705001 RAL-822 1148 chr3L 3720931 3720979 chr3L 3721048 3721086 9 105 7.0 2.5 4.8 1.6 155 chr3L 3720931 intron CG32264 - chr3L 3721008 intron CG32264 - chr3L 3721086 intron CG32264 - chr3L_9_3720001 chr3L_3720001 RAL-822 1149 chr3L 3763726 3763767 chr3L 3763837 3763848 7 92 2.5 0.0 1.2 3.2 122 chr3L 3763726 intron CG32264 - chr3L 3763787 intron CG32264 - chr3L 3763848 intron CG32264 - chr3L_7_3760001 chr3L_3760001 RAL-822 1150 chr3L 3766709 3766732 chr3L 3766830 3766853 10 119 5.5 0.0 2.8 2.6 144 chr3L 3766709 intron CG32264 - chr3L 3766781 intron CG32264 - chr3L 3766853 intron CG32264 - chr3L_10_3765001 chr3L_3765001 RAL-822 1151 chr3L 3783236 3783283 chr3L 3783347 3783366 5 100 0.5 1.0 0.8 2.8 130 chr3L 3783236 intron CG32264 - chr3L 3783301 intron CG32264 - chr3L 3783366 intron CG32264 - chr3L_5_3780001 chr3L_3780001 RAL-822 1152 chr3L 3797206 3797264 chr3L 3797324 3797375 16 110 1.5 3.0 2.2 5.0 169 chr3L 3797206 intron CG32264 - chr3L 3797290 intron CG32264 - chr3L 3797375 intron CG32264 - chr3L_16_3795001 chr3L_3795001 RAL-822 1153 chr3L 3815029 3815071 chr3L 3815137 3815165 12 104 4.5 5.0 4.8 2.1 136 chr3L 3815029 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815097 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815165 intron,intron Scsalpha +,CR43932 - chr3L_12_3815001 chr3L_3815001 RAL-822 1154 chr3L 3833715 3833768 chr3L 3833990 3834034 pogo 9 268 1.0 1.5 1.2 4.1 319 chr3L 3833715 intron enc + chr3L 3833874 intron enc + chr3L 3834034 intron enc + chr3L_9_3830001 chr3L_3830001 RAL-822 1155 chr3L 3889104 3889144 chr3L 3889222 3889247 13 115 7.0 1.5 4.2 2.5 143 chr3L 3889104 intergenic not near genes chr3L 3889176 intergenic not near genes chr3L 3889247 intergenic not near genes chr3L_13_3885001 chr3L_3885001 RAL-822 1156 chr3L 3925988 3926029 chr3L 3926099 3926152 9 126 3.5 1.0 2.2 2.8 164 chr3L 3925988 intron Eip63F-1 - chr3L 3926070 intron Eip63F-1 - chr3L 3926152 intron Eip63F-1 - chr3L_9_3925001 chr3L_3925001 RAL-822 1157 chr3L 3946180 3946224 chr3L 3946272 3946295 12 91 0.5 2.0 1.2 5.5 115 chr3L 3946180 3` UTR CG14982 + chr3L 3946238 3` UTR CG14982 + chr3L 3946295 3` UTR CG14982 + chr3L_12_3945001 chr3L_3945001 RAL-822 1158 chr3L 4015709 4015721 chr3L 4015827 4015839 5 117 4.5 1.5 3.0 1.2 130 chr3L 4015709 intergenic not near genes chr3L 4015774 intergenic not near genes chr3L 4015839 intergenic not near genes chr3L_5_4015001 chr3L_4015001 RAL-822 1159 chr3L 4015727 4015763 chr3L 4015820 4015871 9 110 0.0 1.0 0.5 6.0 144 chr3L 4015727 intergenic not near genes chr3L 4015799 intergenic not near genes chr3L 4015871 intergenic not near genes chr3L_9_4015001 chr3L_4015001 RAL-822 1160 chr3L 4040714 4040725 chr3L 4040814 4040828 4 104 3.0 10.5 6.8 0.5 114 chr3L 4040714 exon Rcd5 + chr3L 4040771 exon Rcd5 + chr3L 4040828 exon Rcd5 + chr3L_4_4040001 chr3L_4040001 RAL-822 1161 chr3L 4146807 4146836 chr3L 4146914 4146942 9 112 0.0 3.0 1.5 3.6 135 chr3L 4146807 intergenic not near genes chr3L 4146874 intergenic not near genes chr3L 4146942 intergenic not near genes chr3L_9_4145001 chr3L_4145001 RAL-822 1162 chr3L 4170120 4170158 chr3L 4170231 4170256 4 108 2.5 1.5 2.0 1.3 136 chr3L 4170120 intergenic Ero1L + chr3L 4170188 intergenic Ero1L + chr3L 4170256 intergenic Ero1L + chr3L_4_4170001 chr3L_4170001 RAL-822 1163 chr3L 4214506 4214540 chr3L 4214683 4214706 8 169 4.0 4.0 4.0 1.6 200 chr3L 4214506 intron CG43367 + chr3L 4214606 intron CG43367 + chr3L 4214706 intron CG43367 + chr3L_8_4210001 chr3L_4210001 RAL-822 1164 chr3L 4238703 4238730 chr3L 4238839 4238866 10 134 2.0 0.0 1.0 5.0 163 chr3L 4238703 intergenic not near genes chr3L 4238784 intergenic not near genes chr3L 4238866 intergenic not near genes chr3L_10_4235001 chr3L_4235001 RAL-822 1165 chr3L 4328738 4328764 chr3L 4336259 4336277 412 4 7515 3.0 3.5 3.2 1.0 7539 chr3L 4328738 intron Cip4 - chr3L 4332508 intron Cip4 - chr3L 4336277 exon Cip4 - chr3L_4_4330001 chr3L_4330001 RAL-822 1166 chr3L 4341332 4341335 chr3L 21448025 21448026 6 17106692 18.5 15.5 17.0 0.3 17106694 chr3L 4341332 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_6_12890001 chr3L_12890001 RAL-822 1167 chr3L 4378818 4378878 chr3L 4378931 4378991 13 107 4.0 4.0 4.0 2.6 173 chr3L 4378818 intron DopEcR - chr3L 4378904 intron DopEcR - chr3L 4378991 intron DopEcR - chr3L_13_4375001 chr3L_4375001 RAL-822 1168 chr3L 4390007 4390066 chr3L 4390112 4390124 11 104 0.0 0.5 0.2 9.2 117 chr3L 4390007 intron slow + chr3L 4390066 intron slow + chr3L 4390124 intron slow + chr3L_11_4390001 chr3L_4390001 RAL-822 1169 chr3L 4440719 4440760 chr3L 4440832 4440866 7 109 3.5 1.0 2.2 2.2 147 chr3L 4440719 intergenic not near genes chr3L 4440792 intergenic not near genes chr3L 4440866 intergenic not near genes chr3L_7_4440001 chr3L_4440001 RAL-822 1170 chr3L 4456714 4456746 chr3L 4456861 4456875 4 132 0.5 2.0 1.2 1.8 161 chr3L 4456714 intergenic CG11345 - chr3L 4456794 intergenic CG11345 - chr3L 4456875 intergenic CG11345 - chr3L_4_4455001 chr3L_4455001 RAL-822 1171 chr3L 4491898 4491909 chr3L 4491988 4492015 5 101 0.5 7.0 3.8 1.0 117 chr3L 4491898 intergenic not near genes chr3L 4491956 intergenic not near genes chr3L 4492015 intergenic not near genes chr3L_5_4490001 chr3L_4490001 RAL-822 1172 chr3L 4597184 4597230 chr3L 4597300 4597327 7 104 4.0 3.5 3.8 1.5 143 chr3L 4597184 intron Src64B - chr3L 4597256 intron Src64B - chr3L 4597327 intron Src64B - chr3L_7_4595001 chr3L_4595001 RAL-822 1173 chr3L 4839565 4839603 chr3L 4839678 4839701 14 105 12.0 3.0 7.5 1.6 136 chr3L 4839565 intron CG13707 - chr3L 4839633 intron CG13707 - chr3L 4839701 intron CG13707 - chr3L_14_4835001 chr3L_4835001 RAL-822 1174 chr3L 4839605 4839625 chr3L 4839676 4839712 7 99 7.0 2.0 4.5 1.3 107 chr3L 4839605 intron CG13707 - chr3L 4839658 intron CG13707 - chr3L 4839712 intron CG13707 - chr3L_7_4835001 chr3L_4835001 RAL-822 1175 chr3L 4858294 4858331 chr3L 4858408 4858432 4 99 3.0 3.0 3.0 1.0 138 chr3L 4858294 intergenic not near genes chr3L 4858363 intergenic not near genes chr3L 4858432 intergenic not near genes chr3L_4_4855001 chr3L_4855001 RAL-822 1176 chr3L 4901104 4901128 chr3L 4907329 4907337 diver 6 6220 8.0 1.5 4.8 1.0 6233 chr3L 4901104 intergenic CG13704 + chr3L 4904220 intergenic not near genes chr3L 4907337 intergenic not near genes chr3L_6_4900001 chr3L_4900001 RAL-822 1177 chr3L 5030751 5030771 chr3L 5030857 5030861 8 102 3.0 3.0 3.0 2.0 110 chr3L 5030751 intron Con - chr3L 5030806 intron Con - chr3L 5030861 intron Con - chr3L_8_5030001 chr3L_5030001 RAL-822 1178 chr3L 5030774 5030787 chr3L 5030855 5030898 4 95 2.5 3.0 2.8 1.1 124 chr3L 5030774 intron Con - chr3L 5030836 intron Con - chr3L 5030898 intron Con - chr3L_4_5030001 chr3L_5030001 RAL-822 1179 chr3L 5034128 5034191 chr3L 5043315 5043378 roo 10 9179 3.0 4.5 3.8 2.1 9250 chr3L 5034128 intron Con - chr3L 5038753 intron Con - chr3L 5043378 intron Con - chr3L_10_5035001 chr3L_5035001 RAL-822 1180 chr3L 5045432 5045460 chr3L 5050248 5050256 Doc 10 4813 5.5 5.0 5.2 1.6 4824 chr3L 5045432 intron Con - chr3L 5047844 intron Con - chr3L 5050256 intron Con - chr3L_10_5045001 chr3L_5045001 RAL-822 1181 chr3L 5045467 5045478 chr3L 5050241 5050294 Doc 10 4808 4.5 4.5 4.5 1.8 4827 chr3L 5045467 intron Con - chr3L 5047880 intron Con - chr3L 5050294 intron Con - chr3L_10_5045001 chr3L_5045001 RAL-822 1182 chr3L 5089001 5089048 chr3L 5089610 5089653 9 604 2.0 1.5 1.8 3.2 652 chr3L 5089001 intergenic not near genes chr3L 5089327 intergenic not near genes chr3L 5089653 intergenic not near genes chr3L_9_5085001 chr3L_5085001 RAL-822 1183 chr3L 5101170 5101229 chr3L 5101284 5101344 13 107 3.0 6.5 4.8 2.2 174 chr3L 5101170 intergenic not near genes chr3L 5101257 intergenic not near genes chr3L 5101344 intergenic not near genes chr3L_13_5100001 chr3L_5100001 RAL-822 1184 chr3L 5104460 5104498 chr3L 5124619 5124667 16 20164 6.0 3.0 4.5 2.9 20207 chr3L 5104460 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124667 intergenic not near genes chr3L_16_5110001 chr3L_5110001 RAL-822 1185 chr3L 5261144 5261177 chr3L 5261248 5261290 9 108 4.5 4.5 4.5 1.6 146 chr3L 5261144 intron shep - chr3L 5261217 intron shep - chr3L 5261290 intron shep - chr3L_9_5260001 chr3L_5260001 RAL-822 1186 chr3L 5299136 5299171 chr3L 5306607 5306642 Quasimodo 5 7471 5.0 6.5 5.8 0.7 7506 chr3L 5299136 intergenic not near genes chr3L 5302889 intergenic not near genes chr3L 5306642 intergenic not near genes chr3L_5_5300001 chr3L_5300001 RAL-822 1187 chr3L 5327428 5327474 chr3L 5327548 5327579 10 113 5.0 4.0 4.5 1.8 151 chr3L 5327428 intergenic not near genes chr3L 5327504 intergenic not near genes chr3L 5327579 intergenic not near genes chr3L_10_5325001 chr3L_5325001 RAL-822 1188 chr3L 5387678 5387693 chr3L 5387944 5387954 5 271 0.0 4.0 2.0 1.7 276 chr3L 5387678 intergenic not near genes chr3L 5387816 intergenic not near genes chr3L 5387954 intergenic not near genes chr3L_5_5385001 chr3L_5385001 RAL-822 1189 chr3L 5492912 5492970 chr3L 5493021 5493083 11 103 7.0 4.0 5.5 1.7 171 chr3L 5492912 intergenic not near genes chr3L 5492998 intergenic CR44520 - chr3L 5493083 intergenic CR44520 - chr3L_11_5490001 chr3L_5490001 RAL-822 1190 chr3L 5531194 5531227 chr3L 5531273 5531333 8 108 5.0 2.0 3.5 1.8 139 chr3L 5531194 intergenic not near genes chr3L 5531264 intergenic not near genes chr3L 5531333 intergenic not near genes chr3L_8_5530001 chr3L_5530001 RAL-822 1191 chr3L 5537687 5537752 chr3L 5538063 5538118 jockey 7 361 2.0 4.5 3.2 1.7 431 chr3L 5537687 intergenic not near genes chr3L 5537902 intergenic not near genes chr3L 5538118 intergenic CG10625 - chr3L_7_5535001 chr3L_5535001 RAL-822 1192 chr3L 5597779 5597829 chr3L 5597907 5597931 11 114 5.5 1.0 3.2 2.6 152 chr3L 5597779 intergenic CG5150 + chr3L 5597855 intergenic CG5150 + chr3L 5597931 intergenic not near genes chr3L_11_5595001 chr3L_5595001 RAL-822 1193 chr3L 5683268 5683279 chr3L 5683352 5683401 4 100 1.0 2.5 1.8 1.4 133 chr3L 5683268 intron sif + chr3L 5683334 intron sif + chr3L 5683401 intron sif + chr3L_4_5680001 chr3L_5680001 RAL-822 1194 chr3L 5788718 5788739 chr3L 5788788 5788828 5 91 2.0 2.5 2.2 1.6 110 chr3L 5788718 intergenic not near genes chr3L 5788773 intergenic not near genes chr3L 5788828 intergenic not near genes chr3L_5_5785001 chr3L_5785001 RAL-822 1195 chr3L 5910011 5910060 chr3L 5910277 5910336 pogo 19 272 4.0 6.5 5.2 3.1 325 chr3L 5910011 intron CG13288 + chr3L 5910174 intron CG13288 + chr3L 5910336 intron CG13288 + chr3L_19_5910001 chr3L_5910001 RAL-822 1196 chr3L 5926305 5926342 chr3L 5926507 5926543 BS 4 201 4.0 3.0 3.5 0.9 238 chr3L 5926305 intron Vap-33B + chr3L 5926424 intron Vap-33B + chr3L 5926543 intron Vap-33B + chr3L_4_5925001 chr3L_5925001 RAL-822 1197 chr3L 6001656 6001711 chr3L 6004386 6004446 jockey 15 2732 3.0 0.5 1.8 5.4 2790 chr3L 6001656 intron PVRAP + chr3L 6003051 intron PVRAP + chr3L 6004446 intron PVRAP + chr3L_15_6000001 chr3L_6000001 RAL-822 1198 chr3L 6040377 6040394 chr3L 6042751 6042769 Doc 4 2383 4.5 4.5 4.5 0.7 2392 chr3L 6040377 intergenic Jon65Aiv + chr3L 6041573 intergenic not near genes chr3L 6042769 intergenic not near genes chr3L_4_6040001 chr3L_6040001 RAL-822 1199 chr3L 6052135 6052151 chr3L 6052236 6052253 5 112 0.0 7.5 3.8 1.0 118 chr3L 6052135 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052194 intergenic Jon65Aii + chr3L 6052253 intergenic Jon65Aii + chr3L_5_6050001 chr3L_6050001 RAL-822 1200 chr3L 6064992 6065045 chr3L 6065104 6065155 9 108 5.0 5.0 5.0 1.5 163 chr3L 6064992 intergenic not near genes chr3L 6065074 intergenic not near genes chr3L 6065155 intergenic not near genes chr3L_9_6065001 chr3L_6065001 RAL-822 1201 chr3L 6102937 6102965 chr3L 6103043 6103083 10 114 10.5 0.5 5.5 1.5 146 chr3L 6102937 intron Ets65A + chr3L 6103010 intron Ets65A + chr3L 6103083 intron Ets65A + chr3L_10_6100001 chr3L_6100001 RAL-822 1202 chr3L 6116666 6116727 chr3L 6116779 6116806 18 111 2.0 1.5 1.8 6.4 140 chr3L 6116666 intron Ets65A + chr3L 6116736 intron Ets65A + chr3L 6116806 intron Ets65A + chr3L_18_6115001 chr3L_6115001 RAL-822 1203 chr3L 6155671 6155703 chr3L 6155792 6155824 7 121 8.5 9.0 8.8 0.7 153 chr3L 6155671 intergenic CR45421 - chr3L 6155748 intergenic not near genes chr3L 6155824 intergenic not near genes chr3L_7_6155001 chr3L_6155001 RAL-822 1204 chr3L 6220921 6220946 chr3L 6230072 6230118 roo 11 9172 5.5 5.0 5.2 1.8 9197 chr3L 6220921 5` UTR pncr008:3L + chr3L 6225520 intergenic not near genes chr3L 6230118 intergenic not near genes chr3L_11_6225001 chr3L_6225001 RAL-822 1205 chr3L 6233301 6233342 chr3L 6233437 6233457 5 134 1.5 6.5 4.0 1.0 156 chr3L 6233301 5` UTR BG642312 - chr3L 6233379 5` UTR BG642312 - chr3L 6233457 intergenic CG42714 -,BG642312 - chr3L_5_6230001 chr3L_6230001 RAL-822 1206 chr3L 6293764 6293793 chr3L 6293851 6293897 5 98 4.0 2.5 3.2 1.2 133 chr3L 6293764 intergenic not near genes chr3L 6293830 intergenic not near genes chr3L 6293897 intergenic not near genes chr3L_5_6290001 chr3L_6290001 RAL-822 1207 chr3L 6334996 6335036 chr3L 6335485 6335519 297 9 496 1.5 5.0 3.2 2.1 523 chr3L 6334996 intron CG13300 - chr3L 6335258 intron CG13300 - chr3L 6335519 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-822 1208 chr3L 6405629 6405674 chr3L 6432128 6432158 roo 15 26495 4.0 5.0 4.5 2.7 26529 chr3L 6405629 intron CG42747 + chr3L 6418894 intron CG42747 + chr3L 6432158 intron CG42747 + chr3L_15_6415001 chr3L_6415001 RAL-822 1209 chr3L 6442166 6442195 chr3L 6442363 6442399 15 187 31.5 22.0 26.8 0.5 233 chr3L 6442166 intron CG42747 + chr3L 6442282 intron CG42747 + chr3L 6442399 intron CG42747 + chr3L_15_6440001 chr3L_6440001 RAL-822 1210 chr3L 6512281 6512292 chr3L 6512349 6512391 4 75 4.0 1.5 2.8 1.1 110 chr3L 6512281 intron sfl + chr3L 6512336 intron sfl + chr3L 6512391 intron sfl + chr3L_4_6510001 chr3L_6510001 RAL-822 1211 chr3L 6620578 6620601 chr3L 6621053 6621066 Rt1c 4 468 4.0 8.0 6.0 0.6 488 chr3L 6620578 intergenic not near genes chr3L 6620822 intergenic not near genes chr3L 6621066 intergenic not near genes chr3L_4_6620001 chr3L_6620001 RAL-822 1212 chr3L 6668933 6668987 chr3L 6669049 6669093 13 108 5.5 4.0 4.8 2.2 160 chr3L 6668933 intergenic not near genes chr3L 6669013 intergenic not near genes chr3L 6669093 intergenic not near genes chr3L_13_6665001 chr3L_6665001 RAL-822 1213 chr3L 6722080 6722099 chr3L 6722192 6722211 4 111 2.0 6.5 4.2 0.8 131 chr3L 6722080 intergenic not near genes chr3L 6722146 intergenic not near genes chr3L 6722211 intergenic not near genes chr3L_4_6720001 chr3L_6720001 RAL-822 1214 chr3L 6781093 6781153 chr3L 6783141 6783198 Doc 12 2044 3.5 0.5 2.0 4.0 2105 chr3L 6781093 intergenic not near genes chr3L 6782146 intergenic not near genes chr3L 6783198 intergenic not near genes chr3L_12_6780001 chr3L_6780001 RAL-822 1215 chr3L 6820606 6820631 chr3L 6820725 6820750 6 114 7.0 11.0 9.0 0.6 144 chr3L 6820606 intergenic not near genes chr3L 6820678 intergenic not near genes chr3L 6820750 intergenic not near genes chr3L_6_6820001 chr3L_6820001 RAL-822 1216 chr3L 6844337 6844388 chr3L 6844518 6844569 6 178 1.0 5.0 3.0 1.5 232 chr3L 6844337 intergenic not near genes chr3L 6844453 intergenic not near genes chr3L 6844569 intergenic not near genes chr3L_6_6840001 chr3L_6840001 RAL-822 1217 chr3L 6868688 6868743 chr3L 6868796 6868856 15 109 0.0 4.5 2.2 4.7 168 chr3L 6868688 intergenic not near genes chr3L 6868772 intergenic not near genes chr3L 6868856 intergenic not near genes chr3L_15_6865001 chr3L_6865001 RAL-822 1218 chr3L 6887504 6887546 chr3L 6895023 6895028 roo 11 7522 4.0 5.5 4.8 1.9 7524 chr3L 6887504 intergenic not near genes chr3L 6891266 intergenic not near genes chr3L 6895028 intergenic not near genes chr3L_11_6890001 chr3L_6890001 RAL-822 1219 chr3L 6907982 6908047 chr3L 6908102 6908160 18 113 2.0 0.0 1.0 9.0 178 chr3L 6907982 intergenic not near genes chr3L 6908071 intergenic not near genes chr3L 6908160 intergenic not near genes chr3L_18_6905001 chr3L_6905001 RAL-822 1220 chr3L 6934319 6934360 chr3L 6934464 6934493 9 142 3.0 4.5 3.8 1.9 174 chr3L 6934319 exon CG14820 + chr3L 6934406 intron CG14820 + chr3L 6934493 exon CG14820 + chr3L_9_6930001 chr3L_6930001 RAL-822 1221 chr3L 6994875 6994915 chr3L 6995500 6995552 BS 9 637 0.0 2.5 1.2 4.1 677 chr3L 6994875 intergenic bin + chr3L 6995214 intergenic not near genes chr3L 6995552 intergenic not near genes chr3L_9_6995001 chr3L_6995001 RAL-822 1222 chr3L 7033186 7033204 chr3L 7033256 7033319 6 97 3.0 3.0 3.0 1.5 133 chr3L 7033186 intron Mp + chr3L 7033252 intron Mp + chr3L 7033319 intron Mp + chr3L_6_7030001 chr3L_7030001 RAL-822 1223 chr3L 7112562 7112609 chr3L 7112683 7112731 7 113 5.0 6.5 5.8 1.0 169 chr3L 7112562 intron form3 + chr3L 7112646 intron form3 + chr3L 7112731 intron form3 + chr3L_7_7110001 chr3L_7110001 RAL-822 1224 chr3L 7187384 7187400 chr3L 7187501 7187517 5 116 0.0 7.0 3.5 1.1 133 chr3L 7187384 intron Dscam2 - chr3L 7187450 intron Dscam2 - chr3L 7187517 intron Dscam2 - chr3L_5_7185001 chr3L_7185001 RAL-822 1225 chr3L 7187402 7187422 chr3L 7187493 7187536 6 108 0.0 5.0 2.5 1.7 134 chr3L 7187402 intron Dscam2 - chr3L 7187469 intron Dscam2 - chr3L 7187536 intron Dscam2 - chr3L_6_7185001 chr3L_7185001 RAL-822 1226 chr3L 7258916 7258924 chr3L 7259076 7259088 6 168 4.5 3.5 4.0 1.2 172 chr3L 7258916 intron CG14830 - chr3L 7259002 intron CG14830 - chr3L 7259088 intron CG14830 - chr3L_6_7255001 chr3L_7255001 RAL-822 1227 chr3L 7377283 7377343 chr3L 7380423 7380483 297 18 3132 3.5 4.0 3.8 3.8 3200 chr3L 7377283 intron SMSr - chr3L 7378883 intron SMSr - chr3L 7380483 intron SMSr - chr3L_18_7375001 chr3L_7375001 RAL-822 1228 chr3L 7480025 7480029 chr3L 7480149 7480153 4 124 4.5 0.0 2.2 1.2 128 chr3L 7480025 intergenic not near genes chr3L 7480089 intergenic not near genes chr3L 7480153 intergenic not near genes chr3L_4_7480001 chr3L_7480001 RAL-822 1229 chr3L 7498733 7498778 chr3L 7503539 7503589 F-element 10 4807 7.5 5.5 6.5 1.3 4856 chr3L 7498733 5` UTR CG8539 - chr3L 7501161 intergenic not near genes chr3L 7503589 intergenic not near genes chr3L_10_7500001 chr3L_7500001 RAL-822 1230 chr3L 7505380 7505442 chr3L 7505491 7505553 16 105 1.5 6.0 3.8 3.3 173 chr3L 7505380 intergenic CG7548 - chr3L 7505466 intergenic CG7548 - chr3L 7505553 3` UTR CG7548 - chr3L_16_7505001 chr3L_7505001 RAL-822 1231 chr3L 7593684 7593736 chr3L 7593800 7593851 9 118 3.5 4.5 4.0 1.8 167 chr3L 7593684 intron CG33275 + chr3L 7593768 intron CG33275 + chr3L 7593851 intron CG33275 + chr3L_9_7590001 chr3L_7590001 RAL-822 1232 chr3L 7793683 7793690 chr3L 7800770 7800776 297 6 7087 19.0 6.0 12.5 0.4 7093 chr3L 7793683 intron CG32369 - chr3L 7797230 intron CG32369 - chr3L 7800776 intron CG32369 - chr3L_6_7795001 chr3L_7795001 RAL-822 1233 chr3L 7793692 7793741 chr3L 7800768 7800806 297 21 7083 8.5 6.0 7.2 2.6 7114 chr3L 7793692 intron CG32369 - chr3L 7797249 intron CG32369 - chr3L 7800806 intron CG32369 - chr3L_21_7795001 chr3L_7795001 RAL-822 1234 chr3L 7867782 7867802 chr3L 7867893 7867915 6 112 2.5 8.0 5.2 1.0 133 chr3L 7867782 intergenic Pdp1 - chr3L 7867848 intergenic Pdp1 - chr3L 7867915 intergenic not near genes chr3L_6_7865001 chr3L_7865001 RAL-822 1235 chr3L 7876098 7876109 chr3L 7876212 7876223 4 114 0.0 0.0 0.0 4.0 125 chr3L 7876098 intron CG32365 + chr3L 7876160 intron CG32365 + chr3L 7876223 intron CG32365 + chr3L_4_7875001 chr3L_7875001 RAL-822 1236 chr3L 7886502 7886538 chr3L 7889049 7889078 Stalker4 7 2543 1.0 3.0 2.0 2.3 2576 chr3L 7886502 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889078 intron CG32365 + chr3L_7_7885001 chr3L_7885001 RAL-822 1237 chr3L 7916821 7916859 chr3L 7926003 7926023 roo 18 9198 2.5 3.0 2.8 4.7 9202 chr3L 7916821 3` UTR syd - chr3L 7921422 intron syd - chr3L 7926023 3` UTR syd - chr3L_18_7920001 chr3L_7920001 RAL-822 1238 chr3L 7939438 7939469 chr3L 7939539 7939568 10 109 8.5 4.5 6.5 1.3 130 chr3L 7939438 intergenic not near genes chr3L 7939503 intergenic not near genes chr3L 7939568 intergenic not near genes chr3L_10_7935001 chr3L_7935001 RAL-822 1239 chr3L 7985365 7985397 chr3L 7987692 7987710 NOF 4 2330 4.0 4.5 4.2 0.8 2345 chr3L 7985365 intron nmo + chr3L 7986538 intron nmo + chr3L 7987710 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-822 1240 chr3L 8041550 8041565 chr3L 8041638 8041663 4 94 3.0 2.5 2.8 1.1 113 chr3L 8041550 intron nmo + chr3L 8041606 intron nmo + chr3L 8041663 intron nmo + chr3L_4_8040001 chr3L_8040001 RAL-822 1241 chr3L 8064593 8064632 chr3L 8064831 8064871 4 239 1.0 2.5 1.8 1.4 278 chr3L 8064593 intron Ect4 + chr3L 8064732 intron Ect4 + chr3L 8064871 intron Ect4 + chr3L_4_8060001 chr3L_8060001 RAL-822 1242 chr3L 8295767 8295776 chr3L 8295959 8295969 5 192 10.0 5.0 7.5 0.6 202 chr3L 8295767 intergenic CG7201 - chr3L 8295868 intergenic not near genes chr3L 8295969 intergenic not near genes chr3L_5_8295001 chr3L_8295001 RAL-822 1243 chr3L 8295778 8295803 chr3L 8295956 8295983 5 185 7.5 5.0 6.2 0.7 205 chr3L 8295778 intergenic CG7201 - chr3L 8295880 intergenic not near genes chr3L 8295983 intergenic not near genes chr3L_5_8295001 chr3L_8295001 RAL-822 1244 chr3L 8295807 8295813 chr3L 8295954 8295990 4 176 6.5 5.0 5.8 0.6 183 chr3L 8295807 intergenic CG7201 - chr3L 8295898 intergenic not near genes chr3L 8295990 intergenic not near genes chr3L_4_8295001 chr3L_8295001 RAL-822 1245 chr3L 8364507 8364535 chr3L 8364612 8364661 9 118 2.0 1.0 1.5 3.6 154 chr3L 8364507 intergenic not near genes chr3L 8364584 intergenic not near genes chr3L 8364661 intergenic not near genes chr3L_9_8360001 chr3L_8360001 RAL-822 1246 chr3L 8451355 8451405 chr3L 8451468 8451518 21 110 5.0 4.0 4.5 3.8 163 chr3L 8451355 intron Gug + chr3L 8451436 intron Gug + chr3L 8451518 intron Gug + chr3L_21_8450001 chr3L_8450001 RAL-822 1247 chr3L 8497861 8497915 chr3L 8498002 8498051 10 139 1.0 5.0 3.0 2.5 190 chr3L 8497861 intron CG43163 - chr3L 8497956 intron CG43163 - chr3L 8498051 intron CG43163 - chr3L_10_8495001 chr3L_8495001 RAL-822 1248 chr3L 8551713 8551764 chr3L 8551829 8551854 11 110 2.5 2.5 2.5 3.1 141 chr3L 8551713 intron rhea + chr3L 8551784 intron rhea + chr3L 8551854 intron rhea + chr3L_11_8550001 chr3L_8550001 RAL-822 1249 chr3L 8606752 8606798 chr3L 8607225 8607271 10 469 4.0 4.0 4.0 2.0 519 chr3L 8606752 intron CG6282 + chr3L 8607012 intron CG6282 + chr3L 8607271 intron CG6282 + chr3L_10_8605001 chr3L_8605001 RAL-822 1250 chr3L 8717269 8717280 chr3L 8717456 8717485 6 214 3.5 7.0 5.2 1.0 216 chr3L 8717269 intergenic not near genes chr3L 8717377 intergenic not near genes chr3L 8717485 intergenic not near genes chr3L_6_8715001 chr3L_8715001 RAL-822 1251 chr3L 8755360 8755370 chr3L 8755660 8755676 4 303 10.5 5.5 8.0 0.4 316 chr3L 8755360 intron Fhos + chr3L 8755518 intron Fhos + chr3L 8755676 intron Fhos + chr3L_4_8755001 chr3L_8755001 RAL-822 1252 chr3L 8755372 8755400 chr3L 8755659 8755687 15 303 5.0 5.0 5.0 2.5 315 chr3L 8755372 intron Fhos + chr3L 8755530 intron Fhos + chr3L 8755687 intron Fhos + chr3L_15_8755001 chr3L_8755001 RAL-822 1253 chr3L 8791246 8791308 chr3L 8796700 8796752 I-element 6 5452 2.5 0.0 1.2 2.7 5506 chr3L 8791246 exon Fhos + chr3L 8793999 intron Fhos + chr3L 8796752 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-822 1254 chr3L 8839693 8839749 chr3L 8839808 8839864 16 108 4.5 1.0 2.8 4.2 171 chr3L 8839693 intron dally + chr3L 8839778 intron dally + chr3L 8839864 intron dally + chr3L_16_8835001 chr3L_8835001 RAL-822 1255 chr3L 8846181 8846204 chr3L 8846297 8846320 7 115 5.0 0.0 2.5 2.0 139 chr3L 8846181 intron dally + chr3L 8846250 intron dally + chr3L 8846320 intron dally + chr3L_7_8845001 chr3L_8845001 RAL-822 1256 chr3L 9003938 9003958 chr3L 9004035 9004038 11 109 0.0 4.0 2.0 3.7 100 chr3L 9003938 intergenic not near genes chr3L 9003988 intergenic not near genes chr3L 9004038 intergenic not near genes chr3L_11_9000001 chr3L_9000001 RAL-822 1257 chr3L 9003962 9003976 chr3L 9004032 9004080 6 104 0.0 3.0 1.5 2.4 118 chr3L 9003962 intergenic not near genes chr3L 9004021 intergenic not near genes chr3L 9004080 intergenic not near genes chr3L_6_9000001 chr3L_9000001 RAL-822 1258 chr3L 9008645 9008669 chr3L 9008728 9008762 5 102 3.0 2.0 2.5 1.4 117 chr3L 9008645 3` UTR CG5194 - chr3L 9008704 3` UTR CG5194 - chr3L 9008762 exon CG5194 - chr3L_5_9005001 chr3L_9005001 RAL-822 1259 chr3L 9011102 9011146 chr3L 9011224 9011257 10 119 4.0 5.0 4.5 1.8 155 chr3L 9011102 intergenic not near genes chr3L 9011180 intergenic not near genes chr3L 9011257 intergenic not near genes chr3L_10_9010001 chr3L_9010001 RAL-822 1260 chr3L 9022730 9022785 chr3L 9022841 9022896 10 110 4.5 8.5 6.5 1.3 166 chr3L 9022730 intergenic not near genes chr3L 9022813 intergenic not near genes chr3L 9022896 intergenic not near genes chr3L_10_9020001 chr3L_9020001 RAL-822 1261 chr3L 9076911 9076953 chr3L 9084485 9084529 412 16 7580 5.5 4.0 4.8 2.8 7618 chr3L 9076911 exon Tequila + chr3L 9080720 intron Tequila + chr3L 9084529 exon Tequila + chr3L_16_9080001 chr3L_9080001 RAL-822 1262 chr3L 9086902 9086904 chr3L 9087006 9087022 5 114 9.5 3.5 6.5 0.7 120 chr3L 9086902 exon Tequila + chr3L 9086962 exon Tequila + chr3L 9087022 exon Tequila + chr3L_5_9085001 chr3L_9085001 RAL-822 1263 chr3L 9086905 9086932 chr3L 9086996 9087025 6 105 7.5 2.0 4.8 1.0 120 chr3L 9086905 exon Tequila + chr3L 9086965 exon Tequila + chr3L 9087025 exon Tequila + chr3L_6_9085001 chr3L_9085001 RAL-822 1264 chr3L 9115236 9115272 chr3L 9115336 9115360 8 108 3.0 4.0 3.5 1.8 124 chr3L 9115236 intron bol - chr3L 9115298 intron bol - chr3L 9115360 intron bol - chr3L_8_9115001 chr3L_9115001 RAL-822 1265 chr3L 9130546 9130563 chr3L 9134323 9134352 412 4 3780 4.5 3.5 4.0 0.8 3806 chr3L 9130546 intergenic bol - chr3L 9132449 intergenic not near genes chr3L 9134352 intergenic Dhpr + chr3L_4_9130001 chr3L_9130001 RAL-822 1266 chr3L 9164688 9164713 chr3L 9166162 9166169 hobo 9 1479 4.5 0.0 2.2 2.8 1481 chr3L 9164688 intron Rdl - chr3L 9165428 intron Rdl - chr3L 9166169 intron Rdl - chr3L_9_9165001 chr3L_9165001 RAL-822 1267 chr3L 9219222 9219255 chr3L 9219918 9219941 jockey 6 686 6.0 3.0 4.5 1.1 719 chr3L 9219222 intergenic not near genes chr3L 9219582 intergenic not near genes chr3L 9219941 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-822 1268 chr3L 9219258 9219271 chr3L 9219911 9219935 jockey 4 660 3.5 2.0 2.8 1.1 677 chr3L 9219258 intergenic not near genes chr3L 9219596 intergenic not near genes chr3L 9219935 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-822 1269 chr3L 9239658 9239723 chr3L 9239998 9240035 9 320 0.5 3.5 2.0 3.0 377 chr3L 9239658 intergenic not near genes chr3L 9239846 intergenic not near genes chr3L 9240035 intergenic not near genes chr3L_9_9235001 chr3L_9235001 RAL-822 1270 chr3L 9241096 9241140 chr3L 9241210 9241255 13 111 6.0 1.5 3.8 2.7 159 chr3L 9241096 intergenic not near genes chr3L 9241176 intergenic not near genes chr3L 9241255 intergenic not near genes chr3L_13_9240001 chr3L_9240001 RAL-822 1271 chr3L 9270595 9270650 chr3L 9278385 9278413 roo 5 7781 1.5 0.5 1.0 2.5 7818 chr3L 9270595 intron GluRIB + chr3L 9274504 intron GluRIB + chr3L 9278413 exon GluRIB + chr3L_5_9270001 chr3L_9270001 RAL-822 1272 chr3L 9428647 9428713 chr3L 9428762 9428813 14 103 3.5 7.0 5.2 2.3 166 chr3L 9428647 3` UTR Shc + chr3L 9428730 intergenic Shc +,RpS17 - chr3L 9428813 3` UTR RpS17 - chr3L_14_9425001 chr3L_9425001 RAL-822 1273 chr3L 9501669 9501733 chr3L 9502187 9502250 roo 9 515 2.5 2.0 2.2 2.8 581 chr3L 9501669 intron path - chr3L 9501960 intron path - chr3L 9502250 intron path - chr3L_9_9500001 chr3L_9500001 RAL-822 1274 chr3L 9502593 9502636 chr3L 9502696 9502751 11 108 2.5 3.0 2.8 2.9 158 chr3L 9502593 intron path - chr3L 9502672 intron path - chr3L 9502751 intron path - chr3L_11_9500001 chr3L_9500001 RAL-822 1275 chr3L 9503456 9503458 chr3L 9503554 9503582 4 116 1.0 9.5 5.2 0.6 126 chr3L 9503456 intron path - chr3L 9503519 intron path - chr3L 9503582 intron path - chr3L_4_9500001 chr3L_9500001 RAL-822 1276 chr3L 9510909 9510914 chr3L 9511020 9511037 4 117 2.5 1.5 2.0 1.3 128 chr3L 9510909 intron RpS9 - chr3L 9510973 intron RpS9 - chr3L 9511037 intron RpS9 - chr3L_4_9510001 chr3L_9510001 RAL-822 1277 chr3L 9571878 9571891 chr3L 9572261 9572268 jockey 5 382 7.0 0.0 3.5 1.1 390 chr3L 9571878 intron CG42673 + chr3L 9572073 intron CG42673 + chr3L 9572268 intron CG42673 + chr3L_5_9570001 chr3L_9570001 RAL-822 1278 chr3L 9571908 9571914 chr3L 9572256 9572271 jockey 4 358 3.0 0.0 1.5 1.6 363 chr3L 9571908 intron CG42673 + chr3L 9572090 intron CG42673 + chr3L 9572271 intron CG42673 + chr3L_4_9570001 chr3L_9570001 RAL-822 1279 chr3L 9575885 9575943 chr3L 9580998 9581032 jockey 4 5102 3.5 4.5 4.0 0.8 5147 chr3L 9575885 intron CG42673 + chr3L 9578458 intron CG42673 + chr3L 9581032 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-822 1280 chr3L 9639009 9639057 chr3L 9639129 9639164 12 112 0.0 6.0 3.0 3.0 155 chr3L 9639009 intron,3` UTR fry -,CG8329 + chr3L 9639086 intron fry - chr3L 9639164 intron fry - chr3L_12_9635001 chr3L_9635001 RAL-822 1281 chr3L 9715576 9715621 chr3L 9715687 9715728 6 107 6.0 5.0 5.5 0.9 152 chr3L 9715576 intron vsg + chr3L 9715652 intron vsg + chr3L 9715728 intron vsg + chr3L_6_9715001 chr3L_9715001 RAL-822 1282 chr3L 9796529 9796578 chr3L 9796654 9796703 17 122 3.0 2.0 2.5 4.9 174 chr3L 9796529 intron Zasp67 - chr3L 9796616 intron Zasp67 - chr3L 9796703 intron Zasp67 - chr3L_17_9795001 chr3L_9795001 RAL-822 1283 chr3L 9822559 9822597 chr3L 9822670 9822718 12 114 6.0 4.5 5.2 1.9 159 chr3L 9822559 intron CG43897 + chr3L 9822638 intron CG43897 + chr3L 9822718 intron CG43897 + chr3L_12_9820001 chr3L_9820001 RAL-822 1284 chr3L 9824119 9824176 chr3L 9824233 9824298 12 113 5.0 0.0 2.5 3.4 179 chr3L 9824119 intron CG43897 + chr3L 9824208 intron CG43897 + chr3L 9824298 intron CG43897 + chr3L_12_9820001 chr3L_9820001 RAL-822 1285 chr3L 9929645 9929686 chr3L 9938451 9938468 roo 8 8805 6.0 5.5 5.8 1.2 8823 chr3L 9929645 intron CG34356 + chr3L 9934056 intron CG34356 + chr3L 9938468 intron CG34356 + chr3L_8_9930001 chr3L_9930001 RAL-822 1286 chr3L 9942383 9942388 chr3L 9942491 9942504 4 113 12.0 2.5 7.2 0.5 121 chr3L 9942383 intron CG34356 + chr3L 9942444 intron CG34356 + chr3L 9942504 intron CG34356 + chr3L_4_9940001 chr3L_9940001 RAL-822 1287 chr3L 9942404 9942415 chr3L 9942485 9942485 4 83 6.5 2.5 4.5 0.7 81 chr3L 9942404 intron CG34356 + chr3L 9942444 intron CG34356 + chr3L 9942485 intron CG34356 + chr3L_4_9940001 chr3L_9940001 RAL-822 1288 chr3L 9947293 9947323 chr3L 9947417 9947446 9 122 3.5 3.5 3.5 2.0 153 chr3L 9947293 intron CG34356 + chr3L 9947370 intron CG34356 + chr3L 9947446 intron CG34356 + chr3L_9_9945001 chr3L_9945001 RAL-822 1289 chr3L 9994077 9994103 chr3L 9994188 9994222 5 118 1.0 0.5 0.8 2.8 145 chr3L 9994077 intron dpr6 + chr3L 9994150 intron dpr6 + chr3L 9994222 intron dpr6 + chr3L_5_9990001 chr3L_9990001 RAL-822 1290 chr3L 10003120 10003179 chr3L 10003252 10003305 19 126 4.5 4.0 4.2 3.7 185 chr3L 10003120 intron dpr6 + chr3L 10003212 intron dpr6 + chr3L 10003305 intron dpr6 + chr3L_19_10000001 chr3L_10000001 RAL-822 1291 chr3L 10085436 10085467 chr3L 10085574 10085610 7 141 3.0 3.0 3.0 1.8 174 chr3L 10085436 intron dpr6 + chr3L 10085523 intron dpr6 + chr3L 10085610 intron dpr6 + chr3L_7_10085001 chr3L_10085001 RAL-822 1292 chr3L 10099155 10099185 chr3L 10099283 10099333 7 138 2.5 4.0 3.2 1.7 178 chr3L 10099155 intron dpr6 + chr3L 10099244 intron dpr6 + chr3L 10099333 intron dpr6 + chr3L_7_10095001 chr3L_10095001 RAL-822 1293 chr3L 10145029 10145084 chr3L 10145233 10145273 6 200 0.5 4.0 2.2 1.9 244 chr3L 10145029 intergenic not near genes chr3L 10145151 intergenic not near genes chr3L 10145273 intergenic not near genes chr3L_6_10145001 chr3L_10145001 RAL-822 1294 chr3L 10191279 10191315 chr3L 10191417 10191456 9 140 0.5 6.0 3.2 2.1 177 chr3L 10191279 intron ect - chr3L 10191368 intron ect - chr3L 10191456 intron ect - chr3L_9_10190001 chr3L_10190001 RAL-822 1295 chr3L 10214792 10214825 chr3L 10214914 10214936 14 127 5.0 3.0 4.0 2.8 144 chr3L 10214792 intergenic not near genes chr3L 10214864 intergenic not near genes chr3L 10214936 intergenic not near genes chr3L_14_10210001 chr3L_10210001 RAL-822 1296 chr3L 10219227 10219267 chr3L 10219334 10219384 16 124 1.5 5.5 3.5 3.6 157 chr3L 10219227 exon CG32055 - chr3L 10219306 exon CG32055 - chr3L 10219384 exon CG32055 - chr3L_16_10215001 chr3L_10215001 RAL-822 1297 chr3L 10250317 10250356 chr3L 10250433 10250462 8 111 0.0 4.0 2.0 2.7 145 chr3L 10250317 intergenic not near genes chr3L 10250390 intergenic not near genes chr3L 10250462 intergenic not near genes chr3L_8_10250001 chr3L_10250001 RAL-822 1298 chr3L 10298661 10298701 chr3L 10298760 10298808 13 118 0.0 2.5 1.2 5.9 147 chr3L 10298661 intergenic not near genes chr3L 10298734 intergenic not near genes chr3L 10298808 intergenic not near genes chr3L_13_10295001 chr3L_10295001 RAL-822 1299 chr3L 10310322 10310383 chr3L 10310454 10310510 14 130 4.0 4.0 4.0 2.8 188 chr3L 10310322 intergenic not near genes chr3L 10310416 intergenic not near genes chr3L 10310510 intergenic not near genes chr3L_14_10310001 chr3L_10310001 RAL-822 1300 chr3L 10328091 10328129 chr3L 10328232 10328276 14 143 7.0 6.5 6.8 1.8 185 chr3L 10328091 intergenic not near genes chr3L 10328184 intergenic not near genes chr3L 10328276 intergenic not near genes chr3L_14_10325001 chr3L_10325001 RAL-822 1301 chr3L 10362664 10362720 chr3L 10363061 10363109 7 395 0.0 5.0 2.5 2.0 445 chr3L 10362664 5` UTR CR44327 + chr3L 10362886 5` UTR CR44327 + chr3L 10363109 5` UTR CR44327 + chr3L_7_10360001 chr3L_10360001 RAL-822 1302 chr3L 10414938 10414976 chr3L 10417321 10417341 Doc 5 2386 5.0 5.5 5.2 0.8 2403 chr3L 10414938 intergenic CG12362 + chr3L 10416140 intergenic not near genes chr3L 10417341 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-822 1303 chr3L 10417568 10417594 chr3L 10417649 10417681 7 83 3.5 2.5 3.0 1.8 113 chr3L 10417568 intergenic not near genes chr3L 10417624 intergenic not near genes chr3L 10417681 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-822 1304 chr3L 10551448 10551488 chr3L 10551570 10551609 10 119 3.0 3.5 3.2 2.4 161 chr3L 10551448 intron A2bp1 + chr3L 10551528 intron A2bp1 + chr3L 10551609 intron A2bp1 + chr3L_10_10550001 chr3L_10550001 RAL-822 1305 chr3L 10553071 10553128 chr3L 10553187 10553235 10 104 2.5 2.0 2.2 3.1 164 chr3L 10553071 intron A2bp1 + chr3L 10553153 intron A2bp1 + chr3L 10553235 intron A2bp1 + chr3L_10_10550001 chr3L_10550001 RAL-822 1306 chr3L 10584246 10584301 chr3L 10584368 10584413 24 120 7.5 4.5 6.0 3.4 167 chr3L 10584246 intron A2bp1 + chr3L 10584330 intron A2bp1 + chr3L 10584413 intron A2bp1 + chr3L_24_10580001 chr3L_10580001 RAL-822 1307 chr3L 10598794 10598816 chr3L 10598905 10598923 7 107 6.0 0.0 3.0 1.8 129 chr3L 10598794 intergenic not near genes chr3L 10598858 intergenic not near genes chr3L 10598923 intergenic not near genes chr3L_7_10595001 chr3L_10595001 RAL-822 1308 chr3L 10600422 10600477 chr3L 10600539 10600593 9 112 3.0 1.5 2.2 2.8 171 chr3L 10600422 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600593 intergenic not near genes chr3L_9_10600001 chr3L_10600001 RAL-822 1309 chr3L 10614746 10614788 chr3L 10614857 10614902 7 108 0.0 6.5 3.2 1.7 156 chr3L 10614746 intergenic not near genes chr3L 10614824 intergenic not near genes chr3L 10614902 intergenic not near genes chr3L_7_10610001 chr3L_10610001 RAL-822 1310 chr3L 10621820 10621859 chr3L 10621942 10621954 10 115 5.5 2.5 4.0 2.0 134 chr3L 10621820 intergenic not near genes chr3L 10621887 intergenic not near genes chr3L 10621954 intergenic not near genes chr3L_10_10620001 chr3L_10620001 RAL-822 1311 chr3L 10658057 10658209 chr3L 10658168 10658371 18 144 0.0 0.0 0.0 18.0 314 chr3L 10658057 intron CG32066 - chr3L 10658214 intron CG32066 - chr3L 10658371 intron CG32066 - chr3L_18_10655001 chr3L_10655001 RAL-822 1312 chr3L 10681486 10681504 chr3L 10681609 10681621 6 122 10.5 0.0 5.2 1.0 135 chr3L 10681486 intron simj + chr3L 10681554 intron simj + chr3L 10681621 intron simj + chr3L_6_10680001 chr3L_10680001 RAL-822 1313 chr3L 10739776 10739801 chr3L 10739894 10739911 7 116 1.0 0.0 0.5 4.7 135 chr3L 10739776 intergenic not near genes chr3L 10739844 intergenic not near genes chr3L 10739911 intergenic not near genes chr3L_7_10735001 chr3L_10735001 RAL-822 1314 chr3L 10745512 10745557 chr3L 10745617 10745672 28 111 5.0 7.5 6.2 3.9 160 chr3L 10745512 intergenic not near genes chr3L 10745592 intergenic not near genes chr3L 10745672 intergenic not near genes chr3L_28_10745001 chr3L_10745001 RAL-822 1315 chr3L 10887362 10887378 chr3L 10887476 10887487 6 113 0.5 7.5 4.0 1.2 125 chr3L 10887362 intergenic not near genes chr3L 10887424 intergenic not near genes chr3L 10887487 intergenic not near genes chr3L_6_10885001 chr3L_10885001 RAL-822 1316 chr3L 10907958 10907967 chr3L 10908069 10908078 5 111 4.0 0.0 2.0 1.7 120 chr3L 10907958 intergenic not near genes chr3L 10908018 intergenic not near genes chr3L 10908078 intergenic not near genes chr3L_5_10905001 chr3L_10905001 RAL-822 1317 chr3L 10910828 10910884 chr3L 10910955 10911011 33 125 3.0 4.5 3.8 6.9 183 chr3L 10910828 intergenic not near genes chr3L 10910920 intergenic not near genes chr3L 10911011 intergenic not near genes chr3L_33_10910001 chr3L_10910001 RAL-822 1318 chr3L 10947477 10947492 chr3L 10947588 10947603 4 111 0.5 1.5 1.0 2.0 126 chr3L 10947477 intergenic not near genes chr3L 10947540 intergenic not near genes chr3L 10947603 intergenic not near genes chr3L_4_10945001 chr3L_10945001 RAL-822 1319 chr3L 10951258 10951294 chr3L 10951369 10951399 7 110 0.0 1.5 0.8 3.9 141 chr3L 10951258 intergenic not near genes chr3L 10951328 intergenic not near genes chr3L 10951399 intergenic not near genes chr3L_7_10950001 chr3L_10950001 RAL-822 1320 chr3L 10956417 10956467 chr3L 10956570 10956610 5 151 1.0 1.0 1.0 2.5 193 chr3L 10956417 intergenic not near genes chr3L 10956514 intergenic not near genes chr3L 10956610 intergenic not near genes chr3L_5_10955001 chr3L_10955001 RAL-822 1321 chr3L 10958182 10958234 chr3L 10958289 10958336 7 103 2.5 0.5 1.5 2.8 154 chr3L 10958182 intergenic not near genes chr3L 10958259 intergenic not near genes chr3L 10958336 intergenic not near genes chr3L_7_10955001 chr3L_10955001 RAL-822 1322 chr3L 11083475 11083532 chr3L 11083608 11083665 25 130 7.0 9.0 8.0 2.8 190 chr3L 11083475 exon JIL-1 - chr3L 11083570 intron JIL-1 - chr3L 11083665 intron JIL-1 - chr3L_25_11080001 chr3L_11080001 RAL-822 1323 chr3L 11085642 11085704 chr3L 11085759 11085822 16 112 1.5 9.5 5.5 2.5 180 chr3L 11085642 exon JIL-1 - chr3L 11085732 intron JIL-1 - chr3L 11085822 intron JIL-1 - chr3L_16_11085001 chr3L_11085001 RAL-822 1324 chr3L 11087007 11087089 chr3L 11088848 11088898 S-element 5 1826 1.0 0.5 0.8 2.8 1891 chr3L 11087007 intron JIL-1 - chr3L 11087952 intron JIL-1 - chr3L 11088898 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-822 1325 chr3L 11090031 11090090 chr3L 11090154 11090208 7 121 6.0 4.0 5.0 1.2 177 chr3L 11090031 intron JIL-1 - chr3L 11090120 intron JIL-1 - chr3L 11090208 intron JIL-1 - chr3L_7_11090001 chr3L_11090001 RAL-822 1326 chr3L 11104042 11104112 chr3L 11104156 11104228 4 112 5.0 0.0 2.5 1.1 186 chr3L 11104042 intergenic CG32071 - chr3L 11104135 intergenic CG32071 - chr3L 11104228 intergenic CG32071 - chr3L_4_11100001 chr3L_11100001 RAL-822 1327 chr3L 11105273 11105292 chr3L 11107017 11107022 X-element 5 1737 14.0 1.0 7.5 0.6 1749 chr3L 11105273 intergenic not near genes chr3L 11106148 intergenic not near genes chr3L 11107022 3` UTR CG32073 - chr3L_5_11105001 chr3L_11105001 RAL-822 1328 chr3L 11105293 11105328 chr3L 11107007 11107033 X-element 6 1715 5.0 1.0 3.0 1.5 1740 chr3L 11105293 intergenic not near genes chr3L 11106163 intergenic not near genes chr3L 11107033 exon CG32073 - chr3L_6_11105001 chr3L_11105001 RAL-822 1329 chr3L 11135494 11135524 chr3L 11135759 11135779 6 261 2.5 0.0 1.2 2.7 285 chr3L 11135494 intergenic CG14143 + chr3L 11135636 intergenic CG14143 +,CG32082 + chr3L 11135779 intergenic CG32082 +,CG14143 + chr3L_6_11135001 chr3L_11135001 RAL-822 1330 chr3L 11180632 11180655 chr3L 11180770 11180798 12 140 3.5 6.5 5.0 2.0 166 chr3L 11180632 intron GlcAT-P - chr3L 11180715 intron GlcAT-P - chr3L 11180798 intron GlcAT-P - chr3L_12_11180001 chr3L_11180001 RAL-822 1331 chr3L 11241745 11241792 chr3L 11241862 11241909 8 114 1.0 3.5 2.2 2.5 164 chr3L 11241745 intergenic not near genes chr3L 11241827 intergenic not near genes chr3L 11241909 intergenic not near genes chr3L_8_11240001 chr3L_11240001 RAL-822 1332 chr3L 11264449 11264494 chr3L 11271425 11271451 17.6 10 6975 2.0 2.0 2.0 3.3 7002 chr3L 11264449 intergenic not near genes chr3L 11267950 intergenic not near genes chr3L 11271451 intergenic not near genes chr3L_10_11265001 chr3L_11265001 RAL-822 1333 chr3L 11278988 11279045 chr3L 11279308 11279364 10 313 7.0 6.0 6.5 1.3 376 chr3L 11278988 intergenic not near genes chr3L 11279176 intergenic not near genes chr3L 11279364 intergenic not near genes chr3L_10_11275001 chr3L_11275001 RAL-822 1334 chr3L 11290600 11290647 chr3L 11290957 11290967 13 353 2.5 2.0 2.2 4.1 367 chr3L 11290600 intron CG6175 - chr3L 11290784 intron CG6175 - chr3L 11290967 intron CG6175 - chr3L_13_11290001 chr3L_11290001 RAL-822 1335 chr3L 11322846 11322882 chr3L 11323105 11323126 10 268 4.0 3.5 3.8 2.1 280 chr3L 11322846 intergenic not near genes chr3L 11322986 intergenic CR44721 - chr3L 11323126 intergenic CR44721 -,CR44722 + chr3L_10_11320001 chr3L_11320001 RAL-822 1336 chr3L 11339646 11339657 chr3L 11339723 11339749 6 85 3.5 2.5 3.0 1.5 103 chr3L 11339646 intergenic not near genes chr3L 11339698 intergenic not near genes chr3L 11339749 intergenic not near genes chr3L_6_11335001 chr3L_11335001 RAL-822 1337 chr3L 11435545 11435583 chr3L 11435731 11435785 13 196 4.5 3.0 3.8 2.7 240 chr3L 11435545 intergenic CG6149 -,CR44548 + chr3L 11435665 5` UTR CR44548 + chr3L 11435785 5` UTR CR44548 + chr3L_13_11435001 chr3L_11435001 RAL-822 1338 chr3L 11456890 11456903 chr3L 11457014 11457035 6 130 1.0 5.0 3.0 1.5 145 chr3L 11456890 intergenic CG12289 - chr3L 11456962 intergenic CG12289 - chr3L 11457035 intergenic CG12289 - chr3L_6_11455001 chr3L_11455001 RAL-822 1339 chr3L 11474622 11474647 chr3L 11474719 11474767 8 113 7.0 4.5 5.8 1.2 145 chr3L 11474622 intergenic Vha16-2 + chr3L 11474694 intergenic Vha16-2 + chr3L 11474767 intergenic Vha16-2 + chr3L_8_11470001 chr3L_11470001 RAL-822 1340 chr3L 11529017 11529051 chr3L 11529160 11529176 7 142 1.5 3.5 2.5 2.0 159 chr3L 11529017 intron Mob2 - chr3L 11529096 intron Mob2 - chr3L 11529176 intron Mob2 - chr3L_7_11525001 chr3L_11525001 RAL-822 1341 chr3L 11564792 11564813 chr3L 11572404 11572419 412 5 7612 3.5 1.0 2.2 1.6 7627 chr3L 11564792 exon CG33267 + chr3L 11568606 intron CG33267 + chr3L 11572419 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-822 1342 chr3L 11579522 11579582 chr3L 11579663 11579723 13 133 1.0 4.0 2.5 3.7 201 chr3L 11579522 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579723 intergenic CG43390 - chr3L_13_11575001 chr3L_11575001 RAL-822 1343 chr3L 11587900 11587941 chr3L 11588001 11588040 7 101 5.5 4.0 4.8 1.2 140 chr3L 11587900 intergenic rt - chr3L 11587970 intergenic rt - chr3L 11588040 intergenic rt - chr3L_7_11585001 chr3L_11585001 RAL-822 1344 chr3L 11588732 11588756 chr3L 11588891 11588904 6 170 2.5 2.0 2.2 1.9 172 chr3L 11588732 intergenic not near genes chr3L 11588818 intergenic not near genes chr3L 11588904 intergenic not near genes chr3L_6_11585001 chr3L_11585001 RAL-822 1345 chr3L 11663757 11663757 chr3L 11663885 11663917 4 151 1.5 0.0 0.8 2.2 160 chr3L 11663757 intron CG32085 - chr3L 11663837 intron CG32085 - chr3L 11663917 intron CG32085 - chr3L_4_11660001 chr3L_11660001 RAL-822 1346 chr3L 11723070 11723106 chr3L 11727890 11727936 Doc 11 4827 7.0 6.5 6.8 1.4 4866 chr3L 11723070 3` UTR Bmcp + chr3L 11725503 intron Bmcp + chr3L 11727936 3` UTR Bmcp + chr3L_11_11725001 chr3L_11725001 RAL-822 1347 chr3L 11743983 11743999 chr3L 11744126 11744135 5 139 3.5 2.0 2.8 1.3 152 chr3L 11743983 exon CG6024 - chr3L 11744059 intron CG6024 - chr3L 11744135 intron CG6024 - chr3L_5_11740001 chr3L_11740001 RAL-822 1348 chr3L 11744002 11744007 chr3L 11744120 11744130 5 131 3.5 2.0 2.8 1.3 128 chr3L 11744002 exon CG6024 - chr3L 11744066 intron CG6024 - chr3L 11744130 intron CG6024 - chr3L_5_11740001 chr3L_11740001 RAL-822 1349 chr3L 11744017 11744045 chr3L 11744135 11744137 8 116 1.5 2.0 1.8 2.9 120 chr3L 11744017 exon CG6024 - chr3L 11744077 intron CG6024 - chr3L 11744137 intron CG6024 - chr3L_8_11740001 chr3L_11740001 RAL-822 1350 chr3L 11770978 11771002 chr3L 11771085 11771102 8 112 6.0 7.5 6.8 1.0 124 chr3L 11770978 exon Muc68D - chr3L 11771040 exon Muc68D - chr3L 11771102 exon Muc68D - chr3L_8_11770001 chr3L_11770001 RAL-822 1351 chr3L 11771005 11771013 chr3L 11771081 11771116 4 90 4.0 6.5 5.2 0.6 111 chr3L 11771005 exon Muc68D - chr3L 11771060 exon Muc68D - chr3L 11771116 exon Muc68D - chr3L_4_11770001 chr3L_11770001 RAL-822 1352 chr3L 11777678 11777678 chr3L 12163305 12163305 5 385627 10.5 11.5 11.0 0.4 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_5_11970001 chr3L_11970001 RAL-822 1353 chr3L 11847145 11847171 chr3L 11847259 11847286 8 119 2.5 0.0 1.2 3.6 141 chr3L 11847145 intergenic CG12521 - chr3L 11847216 intergenic CG12521 - chr3L 11847286 intergenic CG12521 - chr3L_8_11845001 chr3L_11845001 RAL-822 1354 chr3L 11850109 11850165 chr3L 11850239 11850264 9 120 3.0 1.0 2.0 3.0 155 chr3L 11850109 intergenic not near genes chr3L 11850186 intergenic CG44837 - chr3L 11850264 intergenic CG44837 - chr3L_9_11850001 chr3L_11850001 RAL-822 1355 chr3L 11864533 11864564 chr3L 11865858 11865894 pogo 6 1321 1.5 7.0 4.2 1.2 1361 chr3L 11864533 intron CG44837 - chr3L 11865214 intron CG44837 - chr3L 11865894 intron CG44837 - chr3L_6_11865001 chr3L_11865001 RAL-822 1356 chr3L 11864566 11864584 chr3L 11865851 11865899 pogo 9 1306 1.0 3.5 2.2 2.8 1333 chr3L 11864566 intron CG44837 - chr3L 11865232 intron CG44837 - chr3L 11865899 intron CG44837 - chr3L_9_11865001 chr3L_11865001 RAL-822 1357 chr3L 11867391 11867420 chr3L 11867495 11867536 6 108 5.0 4.5 4.8 1.0 145 chr3L 11867391 intron CG44837 - chr3L 11867464 intron CG44837 - chr3L 11867536 intron CG44837 - chr3L_6_11865001 chr3L_11865001 RAL-822 1358 chr3L 11943474 11943520 chr3L 11943610 11943656 10 133 2.5 5.5 4.0 2.0 182 chr3L 11943474 3` UTR Rpt4R + chr3L 11943565 intergenic CG5883 -,Rpt4R + chr3L 11943656 3` UTR CG5883 - chr3L_10_11940001 chr3L_11940001 RAL-822 1359 chr3L 11945153 11945163 chr3L 11945269 11945279 5 116 7.0 2.0 4.5 0.9 126 chr3L 11945153 intergenic CG5883 - chr3L 11945216 intergenic CG5883 - chr3L 11945279 intergenic CG5883 - chr3L_5_11945001 chr3L_11945001 RAL-822 1360 chr3L 11945166 11945216 chr3L 11945265 11945331 17 113 5.0 2.0 3.5 3.8 165 chr3L 11945166 intergenic CG5883 - chr3L 11945248 intergenic CG5883 - chr3L 11945331 intergenic CG5883 - chr3L_17_11945001 chr3L_11945001 RAL-822 1361 chr3L 12013890 12013938 chr3L 12014006 12014041 9 116 3.0 0.0 1.5 3.6 151 chr3L 12013890 intron rols - chr3L 12013966 intron rols - chr3L 12014041 intron rols - chr3L_9_12010001 chr3L_12010001 RAL-822 1362 chr3L 12075404 12075459 chr3L 12075515 12075558 7 112 3.5 0.0 1.8 2.5 154 chr3L 12075404 intron Sema-5c - chr3L 12075481 intron Sema-5c - chr3L 12075558 intron Sema-5c - chr3L_7_12075001 chr3L_12075001 RAL-822 1363 chr3L 12089046 12089103 chr3L 12089161 12089218 19 111 5.5 3.5 4.5 3.5 172 chr3L 12089046 exon CG17154 + chr3L 12089132 3` UTR CG17154 + chr3L 12089218 3` UTR CG17154 + chr3L_19_12085001 chr3L_12085001 RAL-822 1364 chr3L 12092361 12092401 chr3L 12092473 12092513 8 110 1.5 3.5 2.5 2.3 152 chr3L 12092361 intergenic not near genes chr3L 12092437 intergenic not near genes chr3L 12092513 intergenic not near genes chr3L_8_12090001 chr3L_12090001 RAL-822 1365 chr3L 12170765 12170809 chr3L 12170882 12170926 9 112 4.0 4.5 4.2 1.7 161 chr3L 12170765 intron Rh7 - chr3L 12170846 intron Rh7 - chr3L 12170926 intron Rh7 - chr3L_9_12170001 chr3L_12170001 RAL-822 1366 chr3L 12219017 12219017 chr3L 12445288 12445294 4 226276 18.0 4.5 11.2 0.3 226277 chr3L 12219017 intron app - chr3L 12332156 intron CG32105 + chr3L 12445294 intergenic not near genes chr3L_4_12330001 chr3L_12330001 RAL-822 1367 chr3L 12290215 12290223 chr3L 12290340 12290348 4 125 3.5 0.0 1.8 1.4 133 chr3L 12290215 intergenic CR45658 - chr3L 12290282 intergenic CR45658 - chr3L 12290348 intergenic CR45658 - chr3L_4_12290001 chr3L_12290001 RAL-822 1368 chr3L 12304082 12304114 chr3L 12304167 12304192 8 85 3.0 2.5 2.8 2.1 110 chr3L 12304082 intergenic not near genes chr3L 12304137 intergenic not near genes chr3L 12304192 intergenic not near genes chr3L_8_12300001 chr3L_12300001 RAL-822 1369 chr3L 12326348 12326405 chr3L 12326463 12326497 8 110 0.0 1.0 0.5 5.3 149 chr3L 12326348 intergenic not near genes chr3L 12326422 intergenic not near genes chr3L 12326497 intergenic not near genes chr3L_8_12325001 chr3L_12325001 RAL-822 1370 chr3L 12467248 12467274 chr3L 12467343 12467394 6 109 0.0 1.5 0.8 3.3 146 chr3L 12467248 intron eyg - chr3L 12467321 intron eyg - chr3L 12467394 intron eyg - chr3L_6_12465001 chr3L_12465001 RAL-822 1371 chr3L 12491693 12491730 chr3L 12491791 12491848 8 111 3.0 3.5 3.2 1.9 155 chr3L 12491693 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491770 intergenic CG10657 -,CR45682 + chr3L 12491848 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_8_12490001 chr3L_12490001 RAL-822 1372 chr3L 12565387 12565416 chr3L 12565497 12565527 5 110 3.0 6.0 4.5 0.9 140 chr3L 12565387 intron sowah - chr3L 12565457 intron sowah - chr3L 12565527 intron sowah - chr3L_5_12565001 chr3L_12565001 RAL-822 1373 chr3L 12565423 12565444 chr3L 12565496 12565559 7 97 1.5 6.0 3.8 1.5 136 chr3L 12565423 intron sowah - chr3L 12565491 intron sowah - chr3L 12565559 intron sowah - chr3L_7_12565001 chr3L_12565001 RAL-822 1374 chr3L 12610962 12611021 chr3L 12611243 12611302 20 281 0.0 2.5 1.2 9.1 340 chr3L 12610962 intron caup + chr3L 12611132 intron caup + chr3L 12611302 intron caup + chr3L_20_12610001 chr3L_12610001 RAL-822 1375 chr3L 12626118 12626149 chr3L 12626262 12626271 10 138 7.0 0.0 3.5 2.2 153 chr3L 12626118 intergenic not near genes chr3L 12626194 intergenic not near genes chr3L 12626271 intergenic not near genes chr3L_10_12625001 chr3L_12625001 RAL-822 1376 chr3L 12647942 12647977 chr3L 12648038 12648088 7 101 2.5 1.5 2.0 2.3 146 chr3L 12647942 5` UTR CR32111 + chr3L 12648015 5` UTR CR32111 + chr3L 12648088 5` UTR CR32111 + chr3L_7_12645001 chr3L_12645001 RAL-822 1377 chr3L 12706607 12706649 chr3L 12706769 12706789 9 158 3.5 0.5 2.0 3.0 182 chr3L 12706607 intron mirr + chr3L 12706698 intron mirr + chr3L 12706789 intron mirr + chr3L_9_12705001 chr3L_12705001 RAL-822 1378 chr3L 12728000 12728044 chr3L 12728119 12728137 12 116 4.0 10.0 7.0 1.5 137 chr3L 12728000 intergenic not near genes chr3L 12728068 intergenic not near genes chr3L 12728137 intergenic not near genes chr3L_12_12725001 chr3L_12725001 RAL-822 1379 chr3L 12788406 12788437 chr3L 12788539 12788581 7 145 5.0 1.5 3.2 1.7 175 chr3L 12788406 intron Atg1 - chr3L 12788494 intron Atg1 - chr3L 12788581 exon Atg1 - chr3L_7_12785001 chr3L_12785001 RAL-822 1380 chr3L 12801993 12802010 chr3L 12802058 12802121 4 93 2.0 4.5 3.2 1.0 128 chr3L 12801993 intron Atg1 - chr3L 12802057 intron Atg1 - chr3L 12802121 intron Atg1 - chr3L_4_12800001 chr3L_12800001 RAL-822 1381 chr3L 12834644 12834680 chr3L 12834762 12834780 6 106 4.5 2.0 3.2 1.4 136 chr3L 12834644 intron CG10960 - chr3L 12834712 intron CG10960 - chr3L 12834780 intron CG10960 - chr3L_6_12830001 chr3L_12830001 RAL-822 1382 chr3L 12834688 12834697 chr3L 12834760 12834783 6 94 4.0 2.0 3.0 1.5 95 chr3L 12834688 intron CG10960 - chr3L 12834736 intron CG10960 - chr3L 12834783 intron CG10960 - chr3L_6_12830001 chr3L_12830001 RAL-822 1383 chr3L 12857972 12858004 chr3L 12858102 12858134 7 130 7.0 5.0 6.0 1.0 162 chr3L 12857972 3` UTR CG32107 - chr3L 12858053 3` UTR CG32107 - chr3L 12858134 3` UTR CG32107 - chr3L_7_12855001 chr3L_12855001 RAL-822 1384 chr3L 12874914 12874947 chr3L 12877241 12877273 jockey 5 2325 2.0 7.0 4.5 0.9 2359 chr3L 12874914 intergenic not near genes chr3L 12876094 intergenic not near genes chr3L 12877273 intergenic not near genes chr3L_5_12875001 chr3L_12875001 RAL-822 1385 chr3L 12900633 12900661 chr3L 12900956 12900995 4 321 3.0 2.0 2.5 1.1 362 chr3L 12900633 intergenic not near genes chr3L 12900814 intergenic CG12520 - chr3L 12900995 intergenic CG12520 - chr3L_4_12900001 chr3L_12900001 RAL-822 1386 chr3L 12955110 12955158 chr3L 12955211 12955269 20 105 5.0 3.5 4.2 3.8 159 chr3L 12955110 intergenic CG10752 - chr3L 12955190 intergenic not near genes chr3L 12955269 intergenic not near genes chr3L_20_12955001 chr3L_12955001 RAL-822 1387 chr3L 12957767 12957800 chr3L 12962273 12962304 copia 11 4508 5.5 2.0 3.8 2.3 4537 chr3L 12957767 intergenic not near genes chr3L 12960036 intergenic not near genes chr3L 12962304 intergenic not near genes chr3L_11_12960001 chr3L_12960001 RAL-822 1388 chr3L 13069526 13069586 chr3L 13069640 13069697 14 111 4.0 5.5 4.8 2.4 171 chr3L 13069526 intergenic not near genes chr3L 13069612 intergenic not near genes chr3L 13069697 intergenic not near genes chr3L_14_13065001 chr3L_13065001 RAL-822 1389 chr3L 13085051 13085083 chr3L 13085134 13085197 11 100 2.0 4.0 3.0 2.8 146 chr3L 13085051 intergenic not near genes chr3L 13085124 intergenic not near genes chr3L 13085197 intergenic not near genes chr3L_11_13085001 chr3L_13085001 RAL-822 1390 chr3L 13159257 13159272 chr3L 13159371 13159377 4 111 4.0 1.0 2.5 1.1 120 chr3L 13159257 intergenic not near genes chr3L 13159317 intergenic not near genes chr3L 13159377 intergenic not near genes chr3L_4_13155001 chr3L_13155001 RAL-822 1391 chr3L 13178295 13178319 chr3L 13178384 13178457 4 116 2.5 0.0 1.2 1.8 162 chr3L 13178295 intergenic not near genes chr3L 13178376 intergenic not near genes chr3L 13178457 intergenic not near genes chr3L_4_13175001 chr3L_13175001 RAL-822 1392 chr3L 13206204 13206265 chr3L 13206316 13206382 13 97 2.5 3.5 3.0 3.2 178 chr3L 13206204 intergenic not near genes chr3L 13206293 intergenic not near genes chr3L 13206382 intergenic not near genes chr3L_13_13205001 chr3L_13205001 RAL-822 1393 chr3L 13222261 13222302 chr3L 13222375 13222416 9 114 3.5 6.0 4.8 1.6 155 chr3L 13222261 intergenic not near genes chr3L 13222338 intergenic not near genes chr3L 13222416 intergenic not near genes chr3L_9_13220001 chr3L_13220001 RAL-822 1394 chr3L 13231658 13231703 chr3L 13231838 13231893 24 183 6.5 2.0 4.2 4.6 235 chr3L 13231658 intron caps + chr3L 13231776 intron caps + chr3L 13231893 intron caps + chr3L_24_13230001 chr3L_13230001 RAL-822 1395 chr3L 13280277 13280322 chr3L 13280416 13280458 7 137 3.5 3.5 3.5 1.6 181 chr3L 13280277 intergenic not near genes chr3L 13280368 intergenic not near genes chr3L 13280458 intergenic not near genes chr3L_7_13280001 chr3L_13280001 RAL-822 1396 chr3L 13296485 13296548 chr3L 13296610 13296674 19 123 4.0 4.0 4.0 3.8 189 chr3L 13296485 intergenic Sfp70A4 - chr3L 13296580 3` UTR Sfp70A4 - chr3L 13296674 3` UTR Sfp70A4 - chr3L_19_13295001 chr3L_13295001 RAL-822 1397 chr3L 13299363 13299401 chr3L 13299484 13299527 8 119 10.0 1.0 5.5 1.2 164 chr3L 13299363 intergenic CG42481 -,CG43147 - chr3L 13299445 intergenic CG43147 -,CG42481 - chr3L 13299527 intergenic CG43147 - chr3L_8_13295001 chr3L_13295001 RAL-822 1398 chr3L 13305663 13305706 chr3L 13305803 13305836 9 132 4.0 7.5 5.8 1.3 173 chr3L 13305663 intergenic not near genes chr3L 13305750 intergenic not near genes chr3L 13305836 intergenic not near genes chr3L_9_13305001 chr3L_13305001 RAL-822 1399 chr3L 13314573 13314605 chr3L 13314684 13314697 6 109 2.5 2.0 2.2 1.9 124 chr3L 13314573 intergenic not near genes chr3L 13314635 intergenic not near genes chr3L 13314697 intergenic not near genes chr3L_6_13310001 chr3L_13310001 RAL-822 1400 chr3L 13337139 13337154 chr3L 13337265 13337274 4 124 0.0 3.5 1.8 1.4 135 chr3L 13337139 intergenic not near genes chr3L 13337206 intergenic not near genes chr3L 13337274 intergenic not near genes chr3L_4_13335001 chr3L_13335001 RAL-822 1401 chr3L 13338314 13338324 chr3L 13338458 13338474 4 148 12.5 4.0 8.2 0.4 160 chr3L 13338314 intergenic not near genes chr3L 13338394 intergenic not near genes chr3L 13338474 intergenic not near genes chr3L_4_13335001 chr3L_13335001 RAL-822 1402 chr3L 13338325 13338337 chr3L 13338457 13338487 5 144 12.0 4.0 8.0 0.6 162 chr3L 13338325 intergenic not near genes chr3L 13338406 intergenic not near genes chr3L 13338487 intergenic not near genes chr3L_5_13335001 chr3L_13335001 RAL-822 1403 chr3L 13432274 13432320 chr3L 13432389 13432449 13 125 7.0 4.5 5.8 1.9 175 chr3L 13432274 intron CG10713 - chr3L 13432362 intron CG10713 - chr3L 13432449 intron CG10713 - chr3L_13_13430001 chr3L_13430001 RAL-822 1404 chr3L 13477003 13477036 chr3L 13477109 13477143 7 107 0.0 2.0 1.0 3.5 140 chr3L 13477003 intergenic not near genes chr3L 13477073 intergenic stv + chr3L 13477143 intergenic stv + chr3L_7_13475001 chr3L_13475001 RAL-822 1405 chr3L 13525129 13525154 chr3L 13532955 13532971 roo 9 7823 8.0 5.5 6.8 1.2 7842 chr3L 13525129 intergenic not near genes chr3L 13529050 intergenic not near genes chr3L 13532971 intergenic not near genes chr3L_9_13525001 chr3L_13525001 RAL-822 1406 chr3L 13525156 13525190 chr3L 13532951 13532995 roo 8 7807 6.0 5.0 5.5 1.2 7839 chr3L 13525156 intergenic not near genes chr3L 13529076 intergenic not near genes chr3L 13532995 intergenic not near genes chr3L_8_13525001 chr3L_13525001 RAL-822 1407 chr3L 13569185 13569217 chr3L 13569301 13569311 4 112 3.0 1.5 2.2 1.2 126 chr3L 13569185 intron bru-3 - chr3L 13569248 intron bru-3 - chr3L 13569311 intron bru-3 - chr3L_4_13565001 chr3L_13565001 RAL-822 1408 chr3L 13596017 13596061 chr3L 13596152 13596191 9 134 7.5 0.5 4.0 1.8 174 chr3L 13596017 intron bru-3 - chr3L 13596104 intron bru-3 - chr3L 13596191 intron bru-3 - chr3L_9_13595001 chr3L_13595001 RAL-822 1409 chr3L 13626661 13626717 chr3L 13626779 13626818 11 110 3.0 3.0 3.0 2.8 157 chr3L 13626661 intron bru-3 - chr3L 13626740 intron bru-3 - chr3L 13626818 intron bru-3 - chr3L_11_13625001 chr3L_13625001 RAL-822 1410 chr3L 13648895 13648920 chr3L 13648975 13649035 8 106 2.5 3.5 3.0 2.0 140 chr3L 13648895 intron bru-3 - chr3L 13648965 intron bru-3 - chr3L 13649035 intron bru-3 - chr3L_8_13645001 chr3L_13645001 RAL-822 1411 chr3L 13740002 13740053 chr3L 13740124 13740172 8 108 2.0 4.0 3.0 2.0 170 chr3L 13740002 intron bru-3 - chr3L 13740087 intron bru-3 - chr3L 13740172 intron bru-3 - chr3L_8_13740001 chr3L_13740001 RAL-822 1412 chr3L 13766880 13766910 chr3L 13767004 13767043 7 125 5.0 5.0 5.0 1.2 163 chr3L 13766880 intron bru-3 - chr3L 13766962 intron bru-3 - chr3L 13767043 intron bru-3 - chr3L_7_13765001 chr3L_13765001 RAL-822 1413 chr3L 13774626 13774651 chr3L 13774720 13774756 6 104 2.5 1.5 2.0 2.0 130 chr3L 13774626 intron bru-3 - chr3L 13774691 intron bru-3 - chr3L 13774756 intron bru-3 - chr3L_6_13770001 chr3L_13770001 RAL-822 1414 chr3L 13804539 13804569 chr3L 13822834 13822850 roo 12 18294 7.0 4.5 5.8 1.8 18311 chr3L 13804539 intergenic not near genes chr3L 13813694 intergenic not near genes chr3L 13822850 intergenic not near genes chr3L_12_13810001 chr3L_13810001 RAL-822 1415 chr3L 13871701 13871763 chr3L 13871812 13871860 12 105 4.5 9.5 7.0 1.5 159 chr3L 13871701 3` UTR dysc - chr3L 13871780 3` UTR dysc - chr3L 13871860 3` UTR dysc - chr3L_12_13870001 chr3L_13870001 RAL-822 1416 chr3L 13884356 13884377 chr3L 13884470 13884489 5 108 10.5 0.0 5.2 0.8 133 chr3L 13884356 intron dysc - chr3L 13884422 intron dysc - chr3L 13884489 intron dysc - chr3L_5_13880001 chr3L_13880001 RAL-822 1417 chr3L 13898191 13898251 chr3L 13898303 13898361 14 113 1.0 2.0 1.5 5.6 170 chr3L 13898191 intron dysc - chr3L 13898276 intron dysc - chr3L 13898361 intron dysc - chr3L_14_13895001 chr3L_13895001 RAL-822 1418 chr3L 13901546 13901595 chr3L 13901647 13901677 12 104 6.0 1.0 3.5 2.7 131 chr3L 13901546 intron dysc - chr3L 13901612 intron dysc - chr3L 13901677 intron dysc - chr3L_12_13900001 chr3L_13900001 RAL-822 1419 chr3L 13920390 13920431 chr3L 13920505 13920546 18 109 4.5 7.0 5.8 2.6 156 chr3L 13920390 intron Rgl - chr3L 13920468 intron Rgl - chr3L 13920546 intron Rgl - chr3L_18_13920001 chr3L_13920001 RAL-822 1420 chr3L 13941667 13941674 chr3L 13941775 13941787 8 112 0.0 6.0 3.0 2.0 120 chr3L 13941667 intron CG32137 + chr3L 13941727 intron CG32137 + chr3L 13941787 intron CG32137 + chr3L_8_13940001 chr3L_13940001 RAL-822 1421 chr3L 13990894 13990926 chr3L 13990984 13990999 13 97 3.0 4.5 3.8 2.7 105 chr3L 13990894 intron CG17364 - chr3L 13990946 intron CG17364 - chr3L 13990999 intron CG17364 - chr3L_13_13990001 chr3L_13990001 RAL-822 1422 chr3L 14089452 14089501 chr3L 14089584 14089618 4 126 2.5 0.5 1.5 1.6 166 chr3L 14089452 intergenic not near genes chr3L 14089535 intergenic not near genes chr3L 14089618 intergenic not near genes chr3L_4_14085001 chr3L_14085001 RAL-822 1423 chr3L 14194704 14194739 chr3L 14194805 14194840 9 107 3.0 3.5 3.2 2.1 136 chr3L 14194704 intron nuf + chr3L 14194772 intron nuf + chr3L 14194840 intron nuf + chr3L_9_14190001 chr3L_14190001 RAL-822 1424 chr3L 14258113 14258164 chr3L 14258484 14258544 15 377 3.5 5.5 4.5 2.7 431 chr3L 14258113 intergenic not near genes chr3L 14258328 intergenic not near genes chr3L 14258544 intergenic not near genes chr3L_15_14255001 chr3L_14255001 RAL-822 1425 chr3L 14267355 14267383 chr3L 14271811 14271848 F-element 13 4467 6.5 8.0 7.2 1.6 4493 chr3L 14267355 intergenic not near genes chr3L 14269602 intergenic not near genes chr3L 14271848 intergenic not near genes chr3L_13_14265001 chr3L_14265001 RAL-822 1426 chr3L 14295993 14296010 chr3L 14296479 14296519 roo 4 498 3.0 6.5 4.8 0.7 526 chr3L 14295993 intron fz + chr3L 14296256 intron fz + chr3L 14296519 intron fz + chr3L_4_14295001 chr3L_14295001 RAL-822 1427 chr3L 14308109 14308149 chr3L 14308438 14308500 8 338 3.5 7.0 5.2 1.3 391 chr3L 14308109 intron fz + chr3L 14308304 intron fz + chr3L 14308500 intron fz + chr3L_8_14305001 chr3L_14305001 RAL-822 1428 chr3L 14312026 14312054 chr3L 14316840 14316885 X-element 4 4817 0.5 3.0 1.8 1.4 4859 chr3L 14312026 exon fz + chr3L 14314456 intron fz + chr3L 14316885 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-822 1429 chr3L 14338263 14338326 chr3L 14338394 14338431 16 115 1.0 4.5 2.8 4.2 168 chr3L 14338263 intron fz + chr3L 14338347 intron fz + chr3L 14338431 intron fz + chr3L_16_14335001 chr3L_14335001 RAL-822 1430 chr3L 14451262 14451308 chr3L 14451377 14451407 9 110 6.5 1.5 4.0 1.8 145 chr3L 14451262 intron bbg - chr3L 14451334 intron bbg - chr3L 14451407 intron bbg - chr3L_9_14450001 chr3L_14450001 RAL-822 1431 chr3L 14455330 14455395 chr3L 14455446 14455493 6 110 6.5 0.0 3.2 1.4 163 chr3L 14455330 intron bbg - chr3L 14455412 intron bbg - chr3L 14455493 intron bbg - chr3L_6_14455001 chr3L_14455001 RAL-822 1432 chr3L 14468455 14468473 chr3L 14473676 14473704 copia 12 5235 6.5 3.5 5.0 2.0 5249 chr3L 14468455 intron bbg - chr3L 14471080 intron bbg - chr3L 14473704 intron bbg - chr3L_12_14470001 chr3L_14470001 RAL-822 1433 chr3L 14477546 14477583 chr3L 14477671 14477688 5 121 2.5 8.5 5.5 0.8 142 chr3L 14477546 intron bbg - chr3L 14477617 intron bbg - chr3L 14477688 intron bbg - chr3L_5_14475001 chr3L_14475001 RAL-822 1434 chr3L 14505816 14505866 chr3L 14505958 14506009 4 145 5.5 2.0 3.8 0.8 193 chr3L 14505816 intron bbg - chr3L 14505912 intron bbg - chr3L 14506009 intron bbg - chr3L_4_14505001 chr3L_14505001 RAL-822 1435 chr3L 14522096 14522130 chr3L 14522230 14522249 8 131 4.5 7.0 5.8 1.2 153 chr3L 14522096 intron bbg - chr3L 14522172 intron bbg - chr3L 14522249 intron bbg - chr3L_8_14520001 chr3L_14520001 RAL-822 1436 chr3L 14565722 14565777 chr3L 14565835 14565895 12 121 1.0 1.5 1.2 5.5 173 chr3L 14565722 intergenic not near genes chr3L 14565808 intergenic not near genes chr3L 14565895 intergenic not near genes chr3L_12_14565001 chr3L_14565001 RAL-822 1437 chr3L 14574916 14574961 chr3L 14575141 14575170 10 218 2.0 0.0 1.0 5.0 254 chr3L 14574916 intergenic not near genes chr3L 14575043 intergenic not near genes chr3L 14575170 intergenic not near genes chr3L_10_14575001 chr3L_14575001 RAL-822 1438 chr3L 14574969 14575176 chr3L 14575140 14575286 7 111 1.0 0.0 0.5 4.7 317 chr3L 14574969 intergenic not near genes chr3L 14575128 intergenic not near genes chr3L 14575286 intergenic not near genes chr3L_7_14575001 chr3L_14575001 RAL-822 1439 chr3L 14596184 14596200 chr3L 14596315 14596331 8 128 5.5 5.5 5.5 1.2 147 chr3L 14596184 intron HGTX - chr3L 14596258 intron HGTX - chr3L 14596331 intron HGTX - chr3L_8_14595001 chr3L_14595001 RAL-822 1440 chr3L 14635675 14635731 chr3L 14635789 14635837 5 109 1.0 3.5 2.2 1.6 162 chr3L 14635675 intron dlp + chr3L 14635756 intron dlp + chr3L 14635837 intron dlp + chr3L_5_14635001 chr3L_14635001 RAL-822 1441 chr3L 14785011 14785069 chr3L 14785151 14785207 15 136 6.0 3.5 4.8 2.6 196 chr3L 14785011 intron bmm - chr3L 14785109 intron bmm - chr3L 14785207 intron bmm - chr3L_15_14785001 chr3L_14785001 RAL-822 1442 chr3L 14825126 14825157 chr3L 14832888 14832904 Stalker2 8 7756 0.0 6.0 3.0 2.0 7778 chr3L 14825126 intron CG17839 + chr3L 14829015 intron CG17839 + chr3L 14832904 intron CG17839 + chr3L_8_14825001 chr3L_14825001 RAL-822 1443 chr3L 14861778 14861828 chr3L 14861893 14861930 11 105 3.5 2.5 3.0 2.8 152 chr3L 14861778 intron CG17839 + chr3L 14861854 intron CG17839 + chr3L 14861930 intron CG17839 + chr3L_11_14860001 chr3L_14860001 RAL-822 1444 chr3L 14867606 14867650 chr3L 14867723 14867768 14 117 3.5 7.0 5.2 2.3 162 chr3L 14867606 exon CG17839 + chr3L 14867687 intron CG17839 + chr3L 14867768 intron CG17839 + chr3L_14_14865001 chr3L_14865001 RAL-822 1445 chr3L 14917640 14917667 chr3L 14917757 14917785 5 113 4.0 6.0 5.0 0.8 145 chr3L 14917640 intron DCX-EMAP + chr3L 14917712 intron DCX-EMAP + chr3L 14917785 intron DCX-EMAP + chr3L_5_14915001 chr3L_14915001 RAL-822 1446 chr3L 14922112 14922118 chr3L 14922219 14922232 4 114 7.0 4.0 5.5 0.6 120 chr3L 14922112 intron DCX-EMAP + chr3L 14922172 intron DCX-EMAP + chr3L 14922232 intron DCX-EMAP + chr3L_4_14920001 chr3L_14920001 RAL-822 1447 chr3L 14922128 14922134 chr3L 14922209 14922267 5 128 2.5 4.0 3.2 1.2 139 chr3L 14922128 intron DCX-EMAP + chr3L 14922198 intron DCX-EMAP + chr3L 14922267 intron DCX-EMAP + chr3L_5_14920001 chr3L_14920001 RAL-822 1448 chr3L 14970731 14970763 chr3L 14971076 14971108 F-element 11 343 6.5 7.0 6.8 1.4 377 chr3L 14970731 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971108 intergenic not near genes chr3L_11_14970001 chr3L_14970001 RAL-822 1449 chr3L 15085014 15085083 chr3L 15086215 15086279 1360 8 1189 4.5 3.0 3.8 1.7 1265 chr3L 15085014 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086279 intron cp309 - chr3L_8_15085001 chr3L_15085001 RAL-822 1450 chr3L 15094839 15094963 chr3L 15094945 15095093 13 116 0.5 0.0 0.2 10.8 254 chr3L 15094839 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15094966 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095093 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_13_15090001 chr3L_15090001 RAL-822 1451 chr3L 15146129 15146172 chr3L 15146241 15146296 13 114 0.0 6.0 3.0 3.2 167 chr3L 15146129 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146296 3` UTR Pex3 + chr3L_13_15145001 chr3L_15145001 RAL-822 1452 chr3L 15164011 15164051 chr3L 15164258 15164280 4 238 2.5 5.5 4.0 0.8 269 chr3L 15164011 intergenic CG7011 - chr3L 15164146 intergenic not near genes chr3L 15164280 intergenic not near genes chr3L_4_15160001 chr3L_15160001 RAL-822 1453 chr3L 15164827 15165002 chr3L 15164945 15165133 13 112 6.0 5.5 5.8 1.9 306 chr3L 15164827 intergenic not near genes chr3L 15164980 intergenic not near genes chr3L 15165133 intergenic not near genes chr3L_13_15160001 chr3L_15160001 RAL-822 1454 chr3L 15185716 15185769 chr3L 15185825 15185872 6 101 0.5 3.5 2.0 2.0 156 chr3L 15185716 intergenic not near genes chr3L 15185794 intergenic not near genes chr3L 15185872 intergenic not near genes chr3L_6_15185001 chr3L_15185001 RAL-822 1455 chr3L 15192768 15192797 chr3L 15192856 15192887 4 103 2.0 2.5 2.2 1.2 119 chr3L 15192768 intergenic not near genes chr3L 15192828 intergenic not near genes chr3L 15192887 intergenic not near genes chr3L_4_15190001 chr3L_15190001 RAL-822 1456 chr3L 15209039 15209089 chr3L 15209160 15209210 6 121 3.0 5.5 4.2 1.2 171 chr3L 15209039 intergenic CG6888 + chr3L 15209124 intergenic not near genes chr3L 15209210 intergenic not near genes chr3L_6_15205001 chr3L_15205001 RAL-822 1457 chr3L 15209549 15209581 chr3L 15210259 15210286 6 720 1.0 2.5 1.8 2.1 737 chr3L 15209549 intergenic not near genes chr3L 15209918 intergenic not near genes chr3L 15210286 intergenic not near genes chr3L_6_15205001 chr3L_15205001 RAL-822 1458 chr3L 15210933 15210975 chr3L 15211110 15211152 10 176 1.0 3.5 2.2 3.1 219 chr3L 15210933 intergenic not near genes chr3L 15211042 intergenic not near genes chr3L 15211152 intergenic not near genes chr3L_10_15210001 chr3L_15210001 RAL-822 1459 chr3L 15233524 15233572 chr3L 15233640 15233688 14 115 5.0 3.0 4.0 2.8 164 chr3L 15233524 intergenic not near genes chr3L 15233606 intergenic not near genes chr3L 15233688 intergenic not near genes chr3L_14_15230001 chr3L_15230001 RAL-822 1460 chr3L 15257401 15257424 chr3L 15257649 15257672 6 246 6.5 3.5 5.0 1.0 271 chr3L 15257401 intergenic not near genes chr3L 15257536 intergenic not near genes chr3L 15257672 intergenic not near genes chr3L_6_15255001 chr3L_15255001 RAL-822 1461 chr3L 15264035 15264083 chr3L 15264137 15264197 10 109 0.0 0.0 0.0 10.0 162 chr3L 15264035 intergenic not near genes chr3L 15264116 intergenic not near genes chr3L 15264197 intergenic not near genes chr3L_10_15260001 chr3L_15260001 RAL-822 1462 chr3L 15265753 15265800 chr3L 15265860 15265890 11 104 6.0 4.5 5.2 1.8 137 chr3L 15265753 intergenic not near genes chr3L 15265822 intergenic not near genes chr3L 15265890 intergenic not near genes chr3L_11_15265001 chr3L_15265001 RAL-822 1463 chr3L 15295735 15295801 chr3L 15298613 15298651 gypsy5 17 2874 6.5 5.5 6.0 2.4 2916 chr3L 15295735 intergenic not near genes chr3L 15297193 intergenic not near genes chr3L 15298651 intergenic Best4 + chr3L_17_15295001 chr3L_15295001 RAL-822 1464 chr3L 15384926 15384988 chr3L 15385087 15385112 19 146 2.0 3.0 2.5 5.4 186 chr3L 15384926 intergenic not near genes chr3L 15385019 intergenic not near genes chr3L 15385112 intergenic not near genes chr3L_19_15385001 chr3L_15385001 RAL-822 1465 chr3L 15393644 15393690 chr3L 15393865 15393927 10 235 4.5 2.0 3.2 2.4 283 chr3L 15393644 intergenic not near genes chr3L 15393786 intergenic not near genes chr3L 15393927 intergenic not near genes chr3L_10_15390001 chr3L_15390001 RAL-822 1466 chr3L 15399814 15399833 chr3L 15399988 15400019 4 180 14.0 4.0 9.0 0.4 205 chr3L 15399814 intergenic not near genes chr3L 15399916 intergenic not near genes chr3L 15400019 intergenic not near genes chr3L_4_15395001 chr3L_15395001 RAL-822 1467 chr3L 15399841 15399863 chr3L 15399985 15400020 6 171 6.0 3.5 4.8 1.0 179 chr3L 15399841 intergenic not near genes chr3L 15399930 intergenic not near genes chr3L 15400020 intergenic not near genes chr3L_6_15395001 chr3L_15395001 RAL-822 1468 chr3L 15405989 15406052 chr3L 15406101 15406139 7 97 4.5 2.0 3.2 1.7 150 chr3L 15405989 intergenic not near genes chr3L 15406064 intergenic not near genes chr3L 15406139 intergenic not near genes chr3L_7_15405001 chr3L_15405001 RAL-822 1469 chr3L 15423731 15423778 chr3L 15426610 15426657 opus 11 2875 4.5 2.5 3.5 2.4 2926 chr3L 15423731 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426657 intergenic not near genes chr3L_11_15425001 chr3L_15425001 RAL-822 1470 chr3L 15444625 15444655 chr3L 15444746 15444759 6 114 13.5 6.0 9.8 0.6 134 chr3L 15444625 intergenic not near genes chr3L 15444692 intergenic not near genes chr3L 15444759 intergenic not near genes chr3L_6_15440001 chr3L_15440001 RAL-822 1471 chr3L 15444666 15444678 chr3L 15444744 15444792 6 97 7.0 5.0 6.0 0.9 126 chr3L 15444666 intergenic not near genes chr3L 15444729 intergenic not near genes chr3L 15444792 intergenic not near genes chr3L_6_15440001 chr3L_15440001 RAL-822 1472 chr3L 15466020 15466138 chr3L 15466137 15466269 7 126 0.0 0.0 0.0 7.0 249 chr3L 15466020 intergenic not near genes chr3L 15466144 intergenic not near genes chr3L 15466269 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-822 1473 chr3L 15511950 15512007 chr3L 15512052 15512120 9 100 4.0 3.5 3.8 1.9 170 chr3L 15511950 intron Eip71CD + chr3L 15512035 intron Eip71CD + chr3L 15512120 intron Eip71CD + chr3L_9_15510001 chr3L_15510001 RAL-822 1474 chr3L 15536610 15536646 chr3L 15536695 15536750 13 96 8.0 11.5 9.8 1.2 140 chr3L 15536610 intron CrebA + chr3L 15536680 intron CrebA + chr3L 15536750 intron CrebA + chr3L_13_15535001 chr3L_15535001 RAL-822 1475 chr3L 15554890 15554908 chr3L 15556712 15556730 S-element 4 1822 9.0 6.0 7.5 0.5 1840 chr3L 15554890 intron AGO2 + chr3L 15555810 intron AGO2 + chr3L 15556730 intron AGO2 + chr3L_4_15555001 chr3L_15555001 RAL-822 1476 chr3L 15554911 15554939 chr3L 15556710 15556745 S-element 13 1814 5.5 6.0 5.8 1.9 1834 chr3L 15554911 intron AGO2 + chr3L 15555828 intron AGO2 + chr3L 15556745 intron AGO2 + chr3L_13_15555001 chr3L_15555001 RAL-822 1477 chr3L 15594600 15594633 chr3L 15594697 15594738 4 93 4.0 3.0 3.5 0.9 138 chr3L 15594600 intron RhoGAP71E + chr3L 15594669 intron RhoGAP71E + chr3L 15594738 intron RhoGAP71E + chr3L_4_15590001 chr3L_15590001 RAL-822 1478 chr3L 15600162 15600196 chr3L 15600253 15600302 8 117 3.5 0.0 1.8 2.9 140 chr3L 15600162 intron RhoGAP71E + chr3L 15600232 intron RhoGAP71E + chr3L 15600302 intron RhoGAP71E + chr3L_8_15600001 chr3L_15600001 RAL-822 1479 chr3L 15633528 15633580 chr3L 15633635 15633680 12 104 4.0 4.0 4.0 2.4 152 chr3L 15633528 intron comm3 - chr3L 15633604 intron comm3 - chr3L 15633680 intron comm3 - chr3L_12_15630001 chr3L_15630001 RAL-822 1480 chr3L 15658636 15658665 chr3L 15658837 15658866 4 202 11.0 5.0 8.0 0.4 230 chr3L 15658636 intergenic Eig71Eh -,Eig71Eg + chr3L 15658751 intergenic Eig71Eh - chr3L 15658866 intergenic Eig71Eh - chr3L_4_15655001 chr3L_15655001 RAL-822 1481 chr3L 15781619 15781622 chr3L 15781785 15781788 4 166 9.0 0.0 4.5 0.7 169 chr3L 15781619 intergenic not near genes chr3L 15781704 intergenic not near genes chr3L 15781788 intergenic not near genes chr3L_4_15780001 chr3L_15780001 RAL-822 1482 chr3L 15809142 15809195 chr3L 15809251 15809279 13 109 4.5 5.5 5.0 2.2 137 chr3L 15809142 intergenic CG6244 +,CG13445 + chr3L 15809210 intergenic CG13445 +,CG6244 + chr3L 15809279 intergenic CG13445 +,CG6244 + chr3L_13_15805001 chr3L_15805001 RAL-822 1483 chr3L 15832223 15832282 chr3L 15832338 15832367 17 107 3.0 3.0 3.0 4.2 144 chr3L 15832223 intergenic dbo +,CG12713 + chr3L 15832295 intergenic CG12713 +,dbo + chr3L 15832367 intergenic CG12713 +,dbo + chr3L_17_15830001 chr3L_15830001 RAL-822 1484 chr3L 15833800 15833868 chr3L 15834004 15834072 18 210 39.0 36.5 37.8 0.5 272 chr3L 15833800 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833936 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834072 3` UTR CG18081 - chr3L_18_15830001 chr3L_15830001 RAL-822 1485 chr3L 15883161 15883182 chr3L 15883489 15883504 5 324 8.0 0.5 4.2 1.0 343 chr3L 15883161 intron pHCl - chr3L 15883332 intron pHCl - chr3L 15883504 intron pHCl - chr3L_5_15880001 chr3L_15880001 RAL-822 1486 chr3L 15883188 15883223 chr3L 15883486 15883516 12 311 3.5 0.5 2.0 4.0 328 chr3L 15883188 intron pHCl - chr3L 15883352 intron pHCl - chr3L 15883516 intron pHCl - chr3L_12_15880001 chr3L_15880001 RAL-822 1487 chr3L 15916828 15916862 chr3L 15916926 15916974 5 99 3.0 1.0 2.0 1.7 146 chr3L 15916828 intron sff - chr3L 15916901 intron sff - chr3L 15916974 intron sff - chr3L_5_15915001 chr3L_15915001 RAL-822 1488 chr3L 15929168 15929219 chr3L 15938350 15938401 roo 20 9180 4.0 3.0 3.5 4.4 9233 chr3L 15929168 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938401 intron Pka-C3 - chr3L_20_15930001 chr3L_15930001 RAL-822 1489 chr3L 15946482 15946535 chr3L 15946598 15946645 5 114 3.5 0.0 1.8 1.8 163 chr3L 15946482 intron Pka-C3 - chr3L 15946564 intron Pka-C3 - chr3L 15946645 intron Pka-C3 - chr3L_5_15945001 chr3L_15945001 RAL-822 1490 chr3L 15950711 15950735 chr3L 15950846 15950860 7 132 4.5 5.5 5.0 1.2 149 chr3L 15950711 intron Pka-C3 - chr3L 15950786 intron Pka-C3 - chr3L 15950860 intron Pka-C3 - chr3L_7_15950001 chr3L_15950001 RAL-822 1491 chr3L 16070708 16070760 chr3L 16070820 16070847 16 104 2.5 1.5 2.0 5.3 139 chr3L 16070708 intron Mbs + chr3L 16070778 intron Mbs + chr3L 16070847 exon Mbs + chr3L_16_16070001 chr3L_16070001 RAL-822 1492 chr3L 16145745 16145787 chr3L 16145887 16145924 6 134 0.5 7.0 3.8 1.2 179 chr3L 16145745 intron CG5151 - chr3L 16145834 intron CG5151 - chr3L 16145924 intron CG5151 - chr3L_6_16145001 chr3L_16145001 RAL-822 1493 chr3L 16184092 16184118 chr3L 16188929 16188945 X-element 14 4842 8.0 1.5 4.8 2.4 4853 chr3L 16184092 intergenic not near genes chr3L 16186518 intergenic not near genes chr3L 16188945 intergenic not near genes chr3L_14_16185001 chr3L_16185001 RAL-822 1494 chr3L 16184119 16184141 chr3L 16188927 16188932 X-element 7 4821 4.0 1.5 2.8 1.8 4813 chr3L 16184119 intergenic not near genes chr3L 16186526 intergenic not near genes chr3L 16188932 intergenic not near genes chr3L_7_16185001 chr3L_16185001 RAL-822 1495 chr3L 16236335 16236358 chr3L 16236477 16236498 7 146 2.0 9.5 5.8 1.0 163 chr3L 16236335 3` UTR l(3)72Dp + chr3L 16236416 3` UTR l(3)72Dp + chr3L 16236498 3` UTR l(3)72Dp + chr3L_7_16235001 chr3L_16235001 RAL-822 1496 chr3L 16236363 16236370 chr3L 16236472 16236507 5 132 1.0 8.5 4.8 0.9 144 chr3L 16236363 3` UTR l(3)72Dp + chr3L 16236435 3` UTR l(3)72Dp + chr3L 16236507 3` UTR l(3)72Dp + chr3L_5_16235001 chr3L_16235001 RAL-822 1497 chr3L 16359931 16360003 chr3L 16360227 16360291 6 286 0.0 2.0 1.0 3.0 360 chr3L 16359931 intron CG45057 - chr3L 16360111 intron CG45057 - chr3L 16360291 intron CG45057 - chr3L_6_16360001 chr3L_16360001 RAL-822 1498 chr3L 16443841 16443877 chr3L 16446197 16446247 Doc 15 2365 1.0 3.0 2.0 5.0 2406 chr3L 16443841 intron,intron CG33158 +,dsx-c73A - chr3L 16445044 intron,intron CG33158 +,dsx-c73A - chr3L 16446247 intron,intron CG33158 +,dsx-c73A - chr3L_15_16445001 chr3L_16445001 RAL-822 1499 chr3L 16493979 16494012 chr3L 16494506 16494529 jockey 10 527 4.5 9.5 7.0 1.2 550 chr3L 16493979 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494254 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494529 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_10_16490001 chr3L_16490001 RAL-822 1500 chr3L 16514542 16514591 chr3L 16514670 16514713 8 125 5.5 5.0 5.2 1.3 171 chr3L 16514542 intron CG43373 - chr3L 16514628 intron CG43373 - chr3L 16514713 intron CG43373 - chr3L_8_16510001 chr3L_16510001 RAL-822 1501 chr3L 16533543 16533587 chr3L 16533675 16533708 13 130 2.0 2.5 2.2 4.1 165 chr3L 16533543 intron CG43373 - chr3L 16533626 intron CG43373 - chr3L 16533708 intron CG43373 - chr3L_13_16530001 chr3L_16530001 RAL-822 1502 chr3L 16540022 16540072 chr3L 16540145 16540174 12 120 8.5 3.0 5.8 1.8 152 chr3L 16540022 intron CG43373 - chr3L 16540098 intron CG43373 - chr3L 16540174 intron CG43373 - chr3L_12_16540001 chr3L_16540001 RAL-822 1503 chr3L 16563225 16563247 chr3L 16563313 16563337 5 90 3.0 0.0 1.5 2.0 112 chr3L 16563225 intergenic Mipp1 - chr3L 16563281 intergenic Mipp1 - chr3L 16563337 intergenic Mipp1 - chr3L_5_16560001 chr3L_16560001 RAL-822 1504 chr3L 16571537 16571598 chr3L 16571653 16571691 13 110 3.5 3.0 3.2 3.1 154 chr3L 16571537 intron Mipp1 - chr3L 16571614 intron Mipp1 - chr3L 16571691 intron Mipp1 - chr3L_13_16570001 chr3L_16570001 RAL-822 1505 chr3L 16581735 16581747 chr3L 16582134 16582146 4 399 8.0 6.5 7.2 0.5 411 chr3L 16581735 5` UTR CR43727 + chr3L 16581940 5` UTR CR43727 + chr3L 16582146 5` UTR CR43727 + chr3L_4_16580001 chr3L_16580001 RAL-822 1506 chr3L 16581750 16581797 chr3L 16582129 16582174 21 384 3.0 5.5 4.2 4.0 424 chr3L 16581750 5` UTR CR43727 + chr3L 16581962 5` UTR CR43727 + chr3L 16582174 5` UTR CR43727 + chr3L_21_16580001 chr3L_16580001 RAL-822 1507 chr3L 16616482 16616538 chr3L 16621840 16621884 297 10 5354 1.5 1.5 1.5 4.0 5402 chr3L 16616482 3` UTR Abl - chr3L 16619183 3` UTR Abl - chr3L 16621884 3` UTR Abl - chr3L_10_16615001 chr3L_16615001 RAL-822 1508 chr3L 16652663 16652714 chr3L 16652765 16652827 18 103 4.0 4.0 4.0 3.6 164 chr3L 16652663 intron Baldspot - chr3L 16652745 intron Baldspot - chr3L 16652827 intron Baldspot - chr3L_18_16650001 chr3L_16650001 RAL-822 1509 chr3L 16684002 16684045 chr3L 16689258 16689301 copia 5 5255 4.0 6.5 5.2 0.8 5299 chr3L 16684002 intron,intron Lasp -,CG43954 - chr3L 16686652 intron,intron Lasp -,CG43954 - chr3L 16689301 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_5_16685001 chr3L_16685001 RAL-822 1510 chr3L 16743915 16743974 chr3L 16744064 16744118 12 142 4.0 4.0 4.0 2.4 203 chr3L 16743915 intergenic not near genes chr3L 16744016 intergenic not near genes chr3L 16744118 intergenic not near genes chr3L_12_16740001 chr3L_16740001 RAL-822 1511 chr3L 16772465 16772495 chr3L 16772590 16772618 4 124 8.5 2.5 5.5 0.6 153 chr3L 16772465 intron Nrt + chr3L 16772542 intron Nrt + chr3L 16772618 intron Nrt + chr3L_4_16770001 chr3L_16770001 RAL-822 1512 chr3L 16786977 16786997 chr3L 16787073 16787092 4 93 0.5 6.0 3.2 1.0 115 chr3L 16786977 intergenic Int6 - chr3L 16787034 intergenic Int6 - chr3L 16787092 intergenic Int6 -,CG9674 - chr3L_4_16785001 chr3L_16785001 RAL-822 1513 chr3L 16818713 16818778 chr3L 16818824 16818889 23 107 6.5 4.5 5.5 3.5 176 chr3L 16818713 intron,intron nudC +,CG13024 - chr3L 16818801 intron,intron nudC +,CG13024 - chr3L 16818889 intron,intron nudC +,CG13024 - chr3L_23_16815001 chr3L_16815001 RAL-822 1514 chr3L 16844990 16845044 chr3L 16845138 16845187 15 144 1.0 3.0 2.0 5.0 197 chr3L 16844990 5` UTR CG9669 - chr3L 16845088 intergenic CG9669 -,CG9715 + chr3L 16845187 intergenic CG9669 -,CG9715 + chr3L_15_16845001 chr3L_16845001 RAL-822 1515 chr3L 16887601 16887657 chr3L 16887711 16887769 14 109 5.0 5.0 5.0 2.3 168 chr3L 16887601 intron Lmpt + chr3L 16887685 intron Lmpt + chr3L 16887769 intron Lmpt + chr3L_14_16885001 chr3L_16885001 RAL-822 1516 chr3L 16945735 16945745 chr3L 16954890 16954914 roo 4 9162 3.5 3.0 3.2 1.0 9179 chr3L 16945735 exon Obp73a + chr3L 16950324 intergenic not near genes chr3L 16954914 5` UTR Nc73EF + chr3L_4_16950001 chr3L_16950001 RAL-822 1517 chr3L 16972030 16972051 chr3L 16972141 16972162 5 108 6.5 1.5 4.0 1.0 132 chr3L 16972030 intron Exn + chr3L 16972096 intron Exn + chr3L 16972162 intron Exn + chr3L_5_16970001 chr3L_16970001 RAL-822 1518 chr3L 17026793 17026811 chr3L 17026882 17026915 4 106 4.5 5.0 4.8 0.7 122 chr3L 17026793 exon Fit2 + chr3L 17026854 3` UTR Fit2 + chr3L 17026915 3` UTR Fit2 + chr3L_4_17025001 chr3L_17025001 RAL-822 1519 chr3L 17027130 17027188 chr3L 17027257 17027305 10 123 2.5 3.5 3.0 2.5 175 chr3L 17027130 intergenic Fit2 +,CG7730 + chr3L 17027218 intergenic Fit2 +,CG7730 + chr3L 17027305 intergenic Fit2 +,CG7730 + chr3L_10_17025001 chr3L_17025001 RAL-822 1520 chr3L 17034909 17034958 chr3L 17035127 17035181 G2 17 220 3.0 4.5 3.8 3.5 272 chr3L 17034909 intergenic not near genes chr3L 17035045 intergenic not near genes chr3L 17035181 intergenic beg + chr3L_17_17035001 chr3L_17035001 RAL-822 1521 chr3L 17084973 17085031 chr3L 17094157 17094214 roo 12 9180 4.0 5.0 4.5 2.2 9241 chr3L 17084973 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094214 intron Rbp6 - chr3L_12_17085001 chr3L_17085001 RAL-822 1522 chr3L 17118856 17118885 chr3L 17118943 17118944 9 94 2.5 3.5 3.0 2.2 88 chr3L 17118856 intron Rbp6 - chr3L 17118900 intron Rbp6 - chr3L 17118944 intron Rbp6 - chr3L_9_17115001 chr3L_17115001 RAL-822 1523 chr3L 17120621 17120659 chr3L 17120732 17120770 7 110 6.5 3.0 4.8 1.2 149 chr3L 17120621 intron Rbp6 - chr3L 17120696 intron Rbp6 - chr3L 17120770 intron Rbp6 - chr3L_7_17120001 chr3L_17120001 RAL-822 1524 chr3L 17120662 17120677 chr3L 17120731 17120788 9 102 3.0 3.0 3.0 2.2 126 chr3L 17120662 intron Rbp6 - chr3L 17120725 intron Rbp6 - chr3L 17120788 intron Rbp6 - chr3L_9_17120001 chr3L_17120001 RAL-822 1525 chr3L 17199114 17199160 chr3L 17199260 17199296 9 145 4.0 3.0 3.5 2.0 182 chr3L 17199114 intron Rbp6 - chr3L 17199205 intron Rbp6 - chr3L 17199296 intron Rbp6 - chr3L_9_17195001 chr3L_17195001 RAL-822 1526 chr3L 17237352 17237403 chr3L 17237539 17237590 9 184 4.0 1.5 2.8 2.4 238 chr3L 17237352 intron Rbp6 - chr3L 17237471 intron Rbp6 - chr3L 17237590 intron Rbp6 - chr3L_9_17235001 chr3L_17235001 RAL-822 1527 chr3L 17247487 17247539 chr3L 17248959 17248995 8 1464 5.0 10.0 7.5 0.9 1508 chr3L 17247487 intron CR43870 + chr3L 17248241 intron CR43870 + chr3L 17248995 intron CR43870 + chr3L_8_17245001 chr3L_17245001 RAL-822 1528 chr3L 17247570 17247648 chr3L 17249074 17249103 6 1473 11.5 12.5 12.0 0.5 1533 chr3L 17247570 intron CR43870 + chr3L 17248336 intron CR43870 + chr3L 17249103 intron CR43870 + chr3L_6_17245001 chr3L_17245001 RAL-822 1529 chr3L 17367403 17367459 chr3L 17367532 17367588 21 124 2.5 7.0 4.8 3.6 185 chr3L 17367403 intergenic CR45688 +,Cad74A - chr3L 17367496 intergenic CR45688 +,Cad74A - chr3L 17367588 intergenic Cad74A -,CR45688 + chr3L_21_17365001 chr3L_17365001 RAL-822 1530 chr3L 17510712 17510732 chr3L 17510830 17510851 5 115 3.0 4.0 3.5 1.1 139 chr3L 17510712 exon Oatp74D + chr3L 17510782 intron Oatp74D + chr3L 17510851 intron Oatp74D + chr3L_5_17510001 chr3L_17510001 RAL-822 1531 chr3L 17510736 17510757 chr3L 17510829 17510876 4 111 1.5 4.0 2.8 1.1 140 chr3L 17510736 exon Oatp74D + chr3L 17510806 intron Oatp74D + chr3L 17510876 intron Oatp74D + chr3L_4_17510001 chr3L_17510001 RAL-822 1532 chr3L 17585329 17585377 chr3L 17585622 17585667 7 297 31.0 56.0 43.5 0.2 338 chr3L 17585329 intron Eip74EF - chr3L 17585498 intron Eip74EF - chr3L 17585667 intron Eip74EF - chr3L_7_17585001 chr3L_17585001 RAL-822 1533 chr3L 17592770 17592817 chr3L 17592896 17592943 14 124 0.0 4.0 2.0 4.7 173 chr3L 17592770 intron Eip74EF - chr3L 17592856 intron Eip74EF - chr3L 17592943 intron Eip74EF - chr3L_14_17590001 chr3L_17590001 RAL-822 1534 chr3L 17678873 17678889 chr3L 17678990 17679008 6 119 6.5 2.0 4.2 1.2 135 chr3L 17678873 intron CG34251 + chr3L 17678940 intron CG34251 + chr3L 17679008 intron CG34251 + chr3L_6_17675001 chr3L_17675001 RAL-822 1535 chr3L 17789812 17789874 chr3L 17789923 17789985 15 109 4.0 5.0 4.5 2.7 173 chr3L 17789812 intergenic not near genes chr3L 17789898 intergenic not near genes chr3L 17789985 intergenic not near genes chr3L_15_17785001 chr3L_17785001 RAL-822 1536 chr3L 17790601 17790636 chr3L 17790901 17790924 7 294 0.5 5.5 3.0 1.8 323 chr3L 17790601 intergenic CG42815 - chr3L 17790762 intergenic CG42815 - chr3L 17790924 intergenic CG42815 - chr3L_7_17790001 chr3L_17790001 RAL-822 1537 chr3L 17799783 17799837 chr3L 17801605 17801645 S-element 17 1817 7.5 5.5 6.5 2.3 1862 chr3L 17799783 intron NUCB1 - chr3L 17800714 intron NUCB1 - chr3L 17801645 intron NUCB1 - chr3L_17_17800001 chr3L_17800001 RAL-822 1538 chr3L 17884666 17884708 chr3L 17884795 17884833 13 132 3.0 2.5 2.8 3.4 167 chr3L 17884666 intergenic CG5506 - chr3L 17884750 intergenic CG5506 - chr3L 17884833 intergenic CG5506 - chr3L_13_17880001 chr3L_17880001 RAL-822 1539 chr3L 17887853 17887870 chr3L 17887973 17887990 4 120 3.5 7.5 5.5 0.6 137 chr3L 17887853 intron CG7402 + chr3L 17887922 intron CG7402 + chr3L 17887990 intron CG7402 + chr3L_4_17885001 chr3L_17885001 RAL-822 1540 chr3L 17918379 17918397 chr3L 17921205 17921235 opus 9 2831 0.5 8.0 4.2 1.7 2856 chr3L 17918379 intergenic not near genes chr3L 17919807 intergenic not near genes chr3L 17921235 intergenic not near genes chr3L_9_17915001 chr3L_17915001 RAL-822 1541 chr3L 17991548 17991588 chr3L 17991661 17991701 18 110 7.5 3.5 5.5 2.8 153 chr3L 17991548 intron Eip75B - chr3L 17991624 intron Eip75B - chr3L 17991701 intron Eip75B - chr3L_18_17990001 chr3L_17990001 RAL-822 1542 chr3L 18034702 18034705 chr3L 18034775 18034779 4 83 4.0 7.0 5.5 0.6 77 chr3L 18034702 intron Eip75B - chr3L 18034740 intron Eip75B - chr3L 18034779 intron Eip75B - chr3L_4_18030001 chr3L_18030001 RAL-822 1543 chr3L 18047677 18047735 chr3L 18056769 18056827 roo 11 9091 3.0 4.5 3.8 2.3 9150 chr3L 18047677 intron Eip75B - chr3L 18052252 intron Eip75B - chr3L 18056827 intron Eip75B - chr3L_11_18050001 chr3L_18050001 RAL-822 1544 chr3L 18077129 18077152 chr3L 18077254 18077274 15 125 8.0 4.5 6.2 2.1 145 chr3L 18077129 intergenic CR45392 + chr3L 18077202 intergenic CR45392 + chr3L 18077274 intergenic CR45392 + chr3L_15_18075001 chr3L_18075001 RAL-822 1545 chr3L 18118185 18118238 chr3L 18118290 18118344 15 109 3.0 4.0 3.5 3.3 159 chr3L 18118185 3` UTR,intron CG32195 +,CG7341 + chr3L 18118264 3` UTR,intron CG32195 +,CG7341 + chr3L 18118344 3` UTR,intron CG32195 +,CG7341 + chr3L_15_18115001 chr3L_18115001 RAL-822 1546 chr3L 18119601 18119675 chr3L 18119748 18119802 13 136 0.0 6.5 3.2 3.1 201 chr3L 18119601 intron CG7341 + chr3L 18119702 intron CG7341 + chr3L 18119802 5` UTR CG7341 + chr3L_13_18115001 chr3L_18115001 RAL-822 1547 chr3L 18138579 18138599 chr3L 18138828 18138840 8 243 2.5 0.0 1.2 3.6 261 chr3L 18138579 intergenic not near genes chr3L 18138710 intergenic not near genes chr3L 18138840 intergenic not near genes chr3L_8_18135001 chr3L_18135001 RAL-822 1548 chr3L 18150281 18150343 chr3L 18150413 18150475 25 127 3.5 6.5 5.0 4.2 194 chr3L 18150281 intron CG7330 + chr3L 18150378 intron CG7330 + chr3L 18150475 intron CG7330 + chr3L_25_18150001 chr3L_18150001 RAL-822 1549 chr3L 18152700 18152749 chr3L 18152846 18152892 9 143 0.0 3.0 1.5 3.6 192 chr3L 18152700 intron CG7330 + chr3L 18152796 intron CG7330 + chr3L 18152892 intron CG7330 + chr3L_9_18150001 chr3L_18150001 RAL-822 1550 chr3L 18172654 18172694 chr3L 18172765 18172765 13 104 10.0 5.0 7.5 1.5 111 chr3L 18172654 intron W - chr3L 18172710 intron W - chr3L 18172765 intron W - chr3L_13_18170001 chr3L_18170001 RAL-822 1551 chr3L 18198929 18198931 chr3L 24821492 24821494 16 6622563 20.5 7.0 13.8 1.1 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_16_21510001 chr3L_21510001 RAL-822 1552 chr3L 18221093 18221127 chr3L 18221184 18221188 8 90 0.0 2.0 1.0 4.0 95 chr3L 18221093 intergenic not near genes chr3L 18221140 intergenic not near genes chr3L 18221188 intergenic not near genes chr3L_8_18220001 chr3L_18220001 RAL-822 1553 chr3L 18283909 18283943 chr3L 18284011 18284039 11 104 6.5 6.0 6.2 1.5 130 chr3L 18283909 intergenic not near genes chr3L 18283974 intergenic not near genes chr3L 18284039 intergenic not near genes chr3L_11_18280001 chr3L_18280001 RAL-822 1554 chr3L 18343659 18343681 chr3L 18343953 18343978 4 300 2.5 1.5 2.0 1.3 319 chr3L 18343659 intergenic not near genes chr3L 18343818 intergenic not near genes chr3L 18343978 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-822 1555 chr3L 18359583 18359629 chr3L 18359685 18359745 17 115 4.5 3.0 3.8 3.5 162 chr3L 18359583 intergenic not near genes chr3L 18359664 intergenic not near genes chr3L 18359745 intergenic not near genes chr3L_17_18355001 chr3L_18355001 RAL-822 1556 chr3L 18375968 18375998 chr3L 18376073 18376118 8 112 2.0 6.0 4.0 1.6 150 chr3L 18375968 intergenic not near genes chr3L 18376043 intergenic not near genes chr3L 18376118 intergenic not near genes chr3L_8_18375001 chr3L_18375001 RAL-822 1557 chr3L 18386868 18386882 chr3L 18386982 18386997 4 115 0.0 4.0 2.0 1.3 129 chr3L 18386868 intergenic not near genes chr3L 18386932 intergenic not near genes chr3L 18386997 intergenic not near genes chr3L_4_18385001 chr3L_18385001 RAL-822 1558 chr3L 18420064 18420097 chr3L 18420156 18420210 4 103 1.0 3.5 2.2 1.2 146 chr3L 18420064 intergenic not near genes chr3L 18420137 intergenic not near genes chr3L 18420210 intergenic not near genes chr3L_4_18420001 chr3L_18420001 RAL-822 1559 chr3L 18445233 18445273 chr3L 18445330 18445374 7 109 7.0 2.5 4.8 1.2 141 chr3L 18445233 intergenic not near genes chr3L 18445304 intergenic not near genes chr3L 18445374 intergenic not near genes chr3L_7_18445001 chr3L_18445001 RAL-822 1560 chr3L 18448586 18448620 chr3L 18448713 18448736 16 125 9.0 6.0 7.5 1.9 150 chr3L 18448586 intergenic not near genes chr3L 18448661 intergenic not near genes chr3L 18448736 intergenic not near genes chr3L_16_18445001 chr3L_18445001 RAL-822 1561 chr3L 18456265 18456303 chr3L 18456382 18456425 14 119 4.5 6.0 5.2 2.3 160 chr3L 18456265 intergenic CR44670 - chr3L 18456345 intergenic CR44670 - chr3L 18456425 3` UTR CR44670 - chr3L_14_18455001 chr3L_18455001 RAL-822 1562 chr3L 18506107 18506159 chr3L 18509605 18509632 F-element 8 3493 1.5 5.5 3.5 1.8 3525 chr3L 18506107 intergenic not near genes chr3L 18507870 intergenic not near genes chr3L 18509632 intergenic not near genes chr3L_8_18505001 chr3L_18505001 RAL-822 1563 chr3L 18528600 18528658 chr3L 18537791 18537844 roo 13 9192 5.5 4.0 4.8 2.2 9244 chr3L 18528600 intergenic not near genes chr3L 18533222 intergenic not near genes chr3L 18537844 intergenic not near genes chr3L_13_18530001 chr3L_18530001 RAL-822 1564 chr3L 18538600 18538653 chr3L 18539121 18539160 9 502 4.5 2.5 3.5 2.0 560 chr3L 18538600 intergenic not near genes chr3L 18538880 intergenic not near genes chr3L 18539160 intergenic not near genes chr3L_9_18535001 chr3L_18535001 RAL-822 1565 chr3L 18567022 18567049 chr3L 18567117 18567165 7 110 5.0 3.0 4.0 1.4 143 chr3L 18567022 intron AstC-R1 + chr3L 18567094 intron AstC-R1 + chr3L 18567165 intron AstC-R1 + chr3L_7_18565001 chr3L_18565001 RAL-822 1566 chr3L 18593923 18593981 chr3L 18595937 18595960 Doc 8 2004 4.0 1.0 2.5 2.3 2037 chr3L 18593923 intergenic term - chr3L 18594942 intergenic not near genes chr3L 18595960 intergenic CR45389 + chr3L_8_18590001 chr3L_18590001 RAL-822 1567 chr3L 18701119 18701160 chr3L 18701227 18701283 7 116 9.0 10.5 9.8 0.6 164 chr3L 18701119 intergenic not near genes chr3L 18701201 intergenic not near genes chr3L 18701283 intergenic not near genes chr3L_7_18700001 chr3L_18700001 RAL-822 1568 chr3L 18710733 18710791 chr3L 18718710 18718716 Stalker2 14 7977 6.5 2.5 4.5 2.5 7983 chr3L 18710733 intergenic not near genes chr3L 18714724 intergenic not near genes chr3L 18718716 intergenic not near genes chr3L_14_18710001 chr3L_18710001 RAL-822 1569 chr3L 18736020 18736061 chr3L 18736150 18736191 8 127 5.5 5.0 5.2 1.3 171 chr3L 18736020 intergenic not near genes chr3L 18736106 intergenic not near genes chr3L 18736191 intergenic not near genes chr3L_8_18735001 chr3L_18735001 RAL-822 1570 chr3L 18753532 18753564 chr3L 18753632 18753670 13 111 0.5 3.5 2.0 4.3 138 chr3L 18753532 intron ftz-f1 - chr3L 18753601 intron ftz-f1 - chr3L 18753670 intron ftz-f1 - chr3L_13_18750001 chr3L_18750001 RAL-822 1571 chr3L 18772382 18772429 chr3L 18781092 18781119 roo 23 8708 10.5 2.5 6.5 3.1 8737 chr3L 18772382 intron ftz-f1 - chr3L 18776750 intron ftz-f1 - chr3L 18781119 intron ftz-f1 - chr3L_23_18775001 chr3L_18775001 RAL-822 1572 chr3L 18810109 18810173 chr3L 18810221 18810285 23 110 7.5 9.0 8.2 2.5 176 chr3L 18810109 intron CG14073 - chr3L 18810197 intron CG14073 - chr3L 18810285 intron CG14073 - chr3L_23_18810001 chr3L_18810001 RAL-822 1573 chr3L 18833789 18833809 chr3L 18834948 18834982 1360 9 1175 7.0 7.5 7.2 1.1 1193 chr3L 18833789 intron Indy - chr3L 18834386 intron Indy - chr3L 18834982 intron Indy - chr3L_9_18830001 chr3L_18830001 RAL-822 1574 chr3L 18836337 18836410 chr3L 18836456 18836508 10 111 6.5 7.0 6.8 1.3 171 chr3L 18836337 intron Indy - chr3L 18836422 intron Indy - chr3L 18836508 intron Indy - chr3L_10_18835001 chr3L_18835001 RAL-822 1575 chr3L 18839709 18839765 chr3L 18839827 18839878 12 114 6.0 9.5 7.8 1.4 169 chr3L 18839709 intron Indy - chr3L 18839794 intron Indy - chr3L 18839878 intron Indy - chr3L_12_18835001 chr3L_18835001 RAL-822 1576 chr3L 18887267 18887329 chr3L 18887408 18887465 4 140 17.0 21.0 19.0 0.2 198 chr3L 18887267 intron CG3961 - chr3L 18887366 intron CG3961 - chr3L 18887465 intron CG3961 - chr3L_4_18885001 chr3L_18885001 RAL-822 1577 chr3L 18888222 18888288 chr3L 18888340 18888407 6 113 13.5 10.5 12.0 0.5 185 chr3L 18888222 intron CG3961 - chr3L 18888314 intron CG3961 - chr3L 18888407 intron CG3961 - chr3L_6_18885001 chr3L_18885001 RAL-822 1578 chr3L 18924457 18924506 chr3L 18924566 18924617 8 109 3.0 3.5 3.2 1.9 160 chr3L 18924457 intron CG32204 - chr3L 18924537 intron CG32204 - chr3L 18924617 intron CG32204 - chr3L_8_18920001 chr3L_18920001 RAL-822 1579 chr3L 18932244 18932307 chr3L 18932385 18932411 19 124 5.5 5.5 5.5 2.9 167 chr3L 18932244 intron CG32204 - chr3L 18932328 intron CG32204 - chr3L 18932411 intron CG32204 - chr3L_19_18930001 chr3L_18930001 RAL-822 1580 chr3L 18933596 18933659 chr3L 18933725 18933782 18 121 3.5 4.0 3.8 3.8 186 chr3L 18933596 intron CG32204 - chr3L 18933689 intron CG32204 - chr3L 18933782 intron CG32204 - chr3L_18_18930001 chr3L_18930001 RAL-822 1581 chr3L 18935798 18935865 chr3L 18935922 18935978 8 116 5.5 6.0 5.8 1.2 180 chr3L 18935798 intron CG32204 - chr3L 18935888 intron CG32204 - chr3L 18935978 intron CG32204 - chr3L_8_18935001 chr3L_18935001 RAL-822 1582 chr3L 18078296 18078306 chr3L 18937904 18937947 F-element 9 859609 3.5 35.5 19.5 0.4 859651 chr3L 18078296 intergenic CR45392 + chr3L 18508122 intergenic not near genes chr3L 18937947 intron CG32204 - chr3L_9_18505001 chr3L_18505001 RAL-822 1583 chr3L 18958566 18958617 chr3L 18958677 18958716 9 101 5.5 7.0 6.2 1.2 150 chr3L 18958566 intergenic not near genes chr3L 18958641 intergenic not near genes chr3L 18958716 intergenic not near genes chr3L_9_18955001 chr3L_18955001 RAL-822 1584 chr3L 19029459 19029473 chr3L 19029551 19029558 5 96 2.0 3.5 2.8 1.3 99 chr3L 19029459 intron nkd - chr3L 19029508 intron nkd - chr3L 19029558 intron nkd - chr3L_5_19025001 chr3L_19025001 RAL-822 1585 chr3L 19082022 19082045 chr3L 19082137 19082164 4 118 5.0 1.5 3.2 1.0 142 chr3L 19082022 intron Mkp3 - chr3L 19082093 intron Mkp3 - chr3L 19082164 intron Mkp3 - chr3L_4_19080001 chr3L_19080001 RAL-822 1586 chr3L 19101694 19101739 chr3L 19102087 19102145 6 401 2.0 3.5 2.8 1.6 451 chr3L 19101694 intergenic not near genes chr3L 19101920 intergenic not near genes chr3L 19102145 intergenic not near genes chr3L_6_19100001 chr3L_19100001 RAL-822 1587 chr3L 19138559 19138585 chr3L 19138644 19138680 8 85 6.5 9.5 8.0 0.9 121 chr3L 19138559 intron CG14082 - chr3L 19138620 intron CG14082 - chr3L 19138680 intron CG14082 - chr3L_8_19135001 chr3L_19135001 RAL-822 1588 chr3L 19182353 19182418 chr3L 19182469 19182516 10 107 2.0 3.0 2.5 2.9 163 chr3L 19182353 intron fz2 - chr3L 19182434 intron fz2 - chr3L 19182516 intron fz2 - chr3L_10_19180001 chr3L_19180001 RAL-822 1589 chr3L 19208025 19208080 chr3L 19209434 19209463 Doc 7 1393 3.0 1.0 2.0 2.3 1438 chr3L 19208025 intron fz2 - chr3L 19208744 intron fz2 - chr3L 19209463 intron fz2 - chr3L_7_19205001 chr3L_19205001 RAL-822 1590 chr3L 19220633 19220636 chr3L 22908066 22908066 8 3687431 15.0 34.5 24.8 0.3 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_8_21060001 chr3L_21060001 RAL-822 1591 chr3L 19238689 19238740 chr3L 19238831 19238876 8 138 9.5 10.0 9.8 0.7 187 chr3L 19238689 intergenic not near genes chr3L 19238782 intergenic not near genes chr3L 19238876 intergenic not near genes chr3L_8_19235001 chr3L_19235001 RAL-822 1592 chr3L 19282659 19282713 chr3L 19282772 19282821 5 111 13.0 14.5 13.8 0.3 162 chr3L 19282659 3` UTR Gbs-76A - chr3L 19282740 3` UTR Gbs-76A - chr3L 19282821 3` UTR Gbs-76A - chr3L_5_19280001 chr3L_19280001 RAL-822 1593 chr3L 19319608 19319642 chr3L 19319719 19319753 6 106 9.0 12.0 10.5 0.5 145 chr3L 19319608 intron pip - chr3L 19319680 intron pip - chr3L 19319753 intron pip - chr3L_6_19315001 chr3L_19315001 RAL-822 1594 chr3L 19342742 19342769 chr3L 19342860 19342880 10 124 4.5 5.5 5.0 1.7 138 chr3L 19342742 3` UTR CG32206 - chr3L 19342811 3` UTR CG32206 - chr3L 19342880 3` UTR CG32206 - chr3L_10_19340001 chr3L_19340001 RAL-822 1595 chr3L 19387604 19387630 chr3L 19387952 19387997 8 362 5.0 5.0 5.0 1.3 393 chr3L 19387604 intron,exon CG32206 -,ms(3)76Ba + chr3L 19387800 intron,intron CG32206 -,ms(3)76Ba + chr3L 19387997 intron,exon CG32206 -,ms(3)76Ba + chr3L_8_19385001 chr3L_19385001 RAL-822 1596 chr3L 19404954 19405008 chr3L 19405051 19405074 14 95 4.5 4.5 4.5 2.5 120 chr3L 19404954 intron CG32206 - chr3L 19405014 intron CG32206 - chr3L 19405074 intron CG32206 - chr3L_14_19405001 chr3L_19405001 RAL-822 1597 chr3L 19426748 19426778 chr3L 19426824 19426840 4 80 2.0 4.0 3.0 1.0 92 chr3L 19426748 intergenic not near genes chr3L 19426794 intergenic not near genes chr3L 19426840 intergenic not near genes chr3L_4_19425001 chr3L_19425001 RAL-822 1598 chr3L 19439153 19439194 chr3L 19439256 19439308 10 107 8.0 7.0 7.5 1.2 155 chr3L 19439153 intergenic not near genes chr3L 19439230 intergenic not near genes chr3L 19439308 intergenic not near genes chr3L_10_19435001 chr3L_19435001 RAL-822 1599 chr3L 19510653 19510704 chr3L 19510922 19510964 4 256 14.5 8.5 11.5 0.3 311 chr3L 19510653 intergenic not near genes chr3L 19510808 intergenic not near genes chr3L 19510964 intergenic not near genes chr3L_4_19510001 chr3L_19510001 RAL-822 1600 chr3L 19527908 19527951 chr3L 19528007 19528045 8 103 13.5 10.0 11.8 0.6 137 chr3L 19527908 intergenic not near genes chr3L 19527976 intergenic not near genes chr3L 19528045 intergenic not near genes chr3L_8_19525001 chr3L_19525001 RAL-822 1601 chr3L 19644921 19644954 chr3L 19645065 19645096 4 135 2.5 6.0 4.2 0.8 175 chr3L 19644921 intergenic not near genes chr3L 19645008 intergenic not near genes chr3L 19645096 intergenic not near genes chr3L_4_19645001 chr3L_19645001 RAL-822 1602 chr3L 19792333 19792358 chr3L 19792460 19792483 6 127 13.0 9.5 11.2 0.5 150 chr3L 19792333 intron,intron CG42637 -,Gyc76C - chr3L 19792408 intron,intron CG42637 -,Gyc76C - chr3L 19792483 intron,intron CG42637 -,Gyc76C - chr3L_6_19790001 chr3L_19790001 RAL-822 1603 chr3L 19820269 19820280 chr3L 19827853 19827863 412 4 7584 9.5 6.0 7.8 0.5 7594 chr3L 19820269 intron Deaf1 + chr3L 19824066 intron Deaf1 + chr3L 19827863 intron Deaf1 + chr3L_4_19820001 chr3L_19820001 RAL-822 1604 chr3L 19820285 19820319 chr3L 19827849 19827897 412 9 7577 3.0 6.0 4.5 1.6 7612 chr3L 19820285 intron Deaf1 + chr3L 19824091 intron Deaf1 + chr3L 19827897 intron Deaf1 + chr3L_9_19820001 chr3L_19820001 RAL-822 1605 chr3L 19848496 19848521 chr3L 19857719 19857747 roo 4 9218 6.5 5.0 5.8 0.6 9251 chr3L 19848496 intron Papss + chr3L 19853122 intron Papss + chr3L 19857747 intron Papss + chr3L_4_19850001 chr3L_19850001 RAL-822 1606 chr3L 19861816 19861853 chr3L 19863614 19863669 S-element 8 1811 1.0 1.5 1.2 3.6 1853 chr3L 19861816 5` UTR CR45433 + chr3L 19862742 intergenic not near genes chr3L 19863669 intergenic not near genes chr3L_8_19860001 chr3L_19860001 RAL-822 1607 chr3L 19933510 19933562 chr3L 19934360 19934413 17 851 5.0 5.0 5.0 2.8 903 chr3L 19933510 intergenic CR45678 + chr3L 19933962 5` UTR CR45678 + chr3L 19934413 intergenic CR45678 + chr3L_17_19930001 chr3L_19930001 RAL-822 1608 chr3L 19981188 19981234 chr3L 19981283 19981339 14 108 3.0 5.5 4.2 2.7 151 chr3L 19981188 intergenic CG17732 + chr3L 19981264 intergenic CG17732 + chr3L 19981339 intergenic CG17732 + chr3L_14_19980001 chr3L_19980001 RAL-822 1609 chr3L 20113627 20113682 chr3L 20122919 20122967 roo 17 9288 6.0 7.0 6.5 2.3 9340 chr3L 20113627 intergenic not near genes chr3L 20118297 intergenic not near genes chr3L 20122967 intergenic not near genes chr3L_17_20115001 chr3L_20115001 RAL-822 1610 chr3L 20143082 20143109 chr3L 20143158 20143219 8 103 1.5 3.5 2.5 2.3 137 chr3L 20143082 intergenic not near genes chr3L 20143150 intergenic not near genes chr3L 20143219 intergenic not near genes chr3L_8_20140001 chr3L_20140001 RAL-822 1611 chr3L 20148263 20148315 chr3L 20148373 20148430 11 112 0.5 4.5 2.5 3.1 167 chr3L 20148263 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148430 intergenic not near genes chr3L_11_20145001 chr3L_20145001 RAL-822 1612 chr3L 20156160 20156190 chr3L 20156286 20156323 4 130 5.5 1.0 3.2 1.0 163 chr3L 20156160 intron CG42674 - chr3L 20156242 intron CG42674 - chr3L 20156323 intron CG42674 - chr3L_4_20155001 chr3L_20155001 RAL-822 1613 chr3L 20212573 20212585 chr3L 20218185 20218197 mdg3 7 5611 29.0 7.0 18.0 0.4 5624 chr3L 20212573 intergenic CG7017 - chr3L 20215385 intergenic not near genes chr3L 20218197 intergenic CG6933 - chr3L_7_20215001 chr3L_20215001 RAL-822 1614 chr3L 20210637 20210684 chr3L 20219064 20219099 mdg3 6 8422 18.5 16.5 17.5 0.3 8462 chr3L 20210637 3` UTR CG7017 - chr3L 20214868 intergenic not near genes chr3L 20219099 exon CG6933 - chr3L_6_20210001 chr3L_20210001 RAL-822 1615 chr3L 20253240 20253269 chr3L 20253352 20253365 8 108 7.0 7.0 7.0 1.0 125 chr3L 20253240 intron rdgC + chr3L 20253302 intron rdgC + chr3L 20253365 intron rdgC + chr3L_8_20250001 chr3L_20250001 RAL-822 1616 chr3L 20257307 20257362 chr3L 20258461 20258497 pogo 16 1145 3.0 6.5 4.8 2.8 1190 chr3L 20257307 intron rdgC + chr3L 20257902 intron rdgC + chr3L 20258497 intron rdgC + chr3L_16_20255001 chr3L_20255001 RAL-822 1617 chr3L 20262795 20262827 chr3L 20262917 20262974 9 129 3.5 8.5 6.0 1.3 179 chr3L 20262795 exon rdgC + chr3L 20262884 intron rdgC + chr3L 20262974 intron rdgC + chr3L_9_20260001 chr3L_20260001 RAL-822 1618 chr3L 20266419 20266457 chr3L 20266535 20266573 4 121 24.0 20.5 22.2 0.2 154 chr3L 20266419 exon CG32228 + chr3L 20266496 exon CG32228 + chr3L 20266573 exon CG32228 + chr3L_4_20265001 chr3L_20265001 RAL-822 1619 chr3L 20423023 20423035 chr3L 20423229 20423277 4 223 8.5 8.0 8.2 0.4 254 chr3L 20423023 exon zye + chr3L 20423150 exon zye + chr3L 20423277 exon zye + chr3L_4_20420001 chr3L_20420001 RAL-822 1620 chr3L 20476745 20476777 chr3L 20484353 20484411 springer 12 7622 7.5 3.5 5.5 1.8 7666 chr3L 20476745 3` UTR isoQC + chr3L 20480578 intergenic not near genes chr3L 20484411 3` UTR ZnT77C - chr3L_12_20480001 chr3L_20480001 RAL-822 1621 chr3L 20525228 20525228 chr3L 24821492 24821495 5 4296265 10.0 7.0 8.5 0.5 4296267 chr3L 20525228 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821495 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-822 1622 chr3L 20525229 20525229 chr3L 24821492 24821494 7 4296264 10.0 7.0 8.5 0.7 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_7_22670001 chr3L_22670001 RAL-822 1623 chr3L 20525230 20525230 chr3L 24821493 24821494 4 4296264 10.5 7.0 8.8 0.4 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-822 1624 chr3L 20536280 20536338 chr3L 20536396 20536440 14 106 8.0 5.0 6.5 1.9 160 chr3L 20536280 intron Rcd2 - chr3L 20536360 intron Rcd2 - chr3L 20536440 intron Rcd2 - chr3L_14_20535001 chr3L_20535001 RAL-822 1625 chr3L 20548342 20548384 chr3L 20548452 20548493 13 115 8.0 2.0 5.0 2.2 151 chr3L 20548342 intergenic not near genes chr3L 20548418 intergenic not near genes chr3L 20548493 intergenic not near genes chr3L_13_20545001 chr3L_20545001 RAL-822 1626 chr3L 20593802 20593817 chr3L 20593892 20593900 6 92 9.5 5.0 7.2 0.7 98 chr3L 20593802 intergenic not near genes chr3L 20593851 intergenic not near genes chr3L 20593900 intergenic not near genes chr3L_6_20590001 chr3L_20590001 RAL-822 1627 chr3L 20710725 20710793 chr3L 20710837 20710875 16 101 6.0 5.5 5.8 2.4 150 chr3L 20710725 intergenic not near genes chr3L 20710800 intergenic not near genes chr3L 20710875 intergenic not near genes chr3L_16_20710001 chr3L_20710001 RAL-822 1628 chr3L 20749909 20749961 chr3L 20750025 20750078 7 115 15.0 15.0 15.0 0.4 169 chr3L 20749909 intergenic not near genes chr3L 20749994 intergenic not near genes chr3L 20750078 intergenic not near genes chr3L_7_20745001 chr3L_20745001 RAL-822 1629 chr3L 20821267 20821311 chr3L 20824762 20824765 NOF 13 3497 4.0 6.0 5.0 2.2 3498 chr3L 20821267 intron Pka-R1 + chr3L 20823016 intron Pka-R1 + chr3L 20824765 intron Pka-R1 + chr3L_13_20820001 chr3L_20820001 RAL-822 1630 chr3L 20849240 20849301 chr3L 20849354 20849415 23 109 4.5 6.5 5.5 3.5 175 chr3L 20849240 intron CG32432 - chr3L 20849328 intron CG32432 - chr3L 20849415 intron CG32432 - chr3L_23_20845001 chr3L_20845001 RAL-822 1631 chr3L 20936152 20936152 chr3L 23941244 23941244 9 3005092 7.0 13.0 10.0 0.8 3005092 chr3L 20936152 intron fng - chr3L 22438698 intergenic not near genes chr3L 23941244 intron CG40470 - chr3L_9_22435001 chr3L_22435001 RAL-822 1632 chr3L 21067945 21067969 chr3L 21068039 21068069 6 97 5.0 7.0 6.0 0.9 124 chr3L 21067945 intron siz + chr3L 21068007 intron siz + chr3L 21068069 intron siz + chr3L_6_21065001 chr3L_21065001 RAL-822 1633 chr3L 21071288 21071337 chr3L 21071482 21071505 4 183 15.5 14.5 15.0 0.2 217 chr3L 21071288 intron siz + chr3L 21071396 intron siz + chr3L 21071505 intron siz + chr3L_4_21070001 chr3L_21070001 RAL-822 1634 chr3L 21082174 21082234 chr3L 21082287 21082347 16 105 6.5 3.5 5.0 2.7 173 chr3L 21082174 intron ko - chr3L 21082260 intron ko - chr3L 21082347 intron ko - chr3L_16_21080001 chr3L_21080001 RAL-822 1635 chr3L 21151840 21151892 chr3L 21156949 21157011 flea 21 5110 3.0 7.0 5.0 3.5 5171 chr3L 21151840 intron Ac78C - chr3L 21154426 intron Ac78C - chr3L 21157011 intron Ac78C - chr3L_21_21150001 chr3L_21150001 RAL-822 1636 chr3L 21164746 21164811 chr3L 21164877 21164942 9 125 7.5 5.0 6.2 1.2 196 chr3L 21164746 intron Ac78C - chr3L 21164844 intron Ac78C - chr3L 21164942 intron Ac78C - chr3L_9_21160001 chr3L_21160001 RAL-822 1637 chr3L 21306124 21306169 chr3L 21315318 21315343 roo 8 9189 7.5 3.0 5.2 1.3 9219 chr3L 21306124 3` UTR CG7632 + chr3L 21310734 intron Pc - chr3L 21315343 3` UTR Pc - chr3L_8_21310001 chr3L_21310001 RAL-822 1638 chr3L 21319495 21319500 chr3L 21319620 21319625 4 125 11.5 4.5 8.0 0.4 130 chr3L 21319495 5` UTR Rab26 + chr3L 21319560 5` UTR Rab26 + chr3L 21319625 5` UTR Rab26 + chr3L_4_21315001 chr3L_21315001 RAL-822 1639 chr3L 21319502 21319557 chr3L 21319616 21319674 15 114 2.0 4.0 3.0 3.8 172 chr3L 21319502 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319674 5` UTR Rab26 + chr3L_15_21315001 chr3L_21315001 RAL-822 1640 chr3L 21395156 21395169 chr3L 21395233 21395275 6 92 9.0 10.5 9.8 0.6 119 chr3L 21395156 intron rgn + chr3L 21395216 intron rgn + chr3L 21395275 intron rgn + chr3L_6_21395001 chr3L_21395001 RAL-822 1641 chr3L 4341331 4341335 chr3L 21448026 21448026 10 17106694 18.5 15.5 17.0 0.6 17106695 chr3L 4341331 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_10_12890001 chr3L_12890001 RAL-822 1642 chr3L 4341331 4341333 chr3L 21448027 21448027 15 17106695 18.0 15.5 16.8 0.8 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_15_12890001 chr3L_12890001 RAL-822 1643 chr3L 21450954 21451018 chr3L 21451069 21451121 19 113 14.0 11.5 12.8 1.4 167 chr3L 21450954 intergenic not near genes chr3L 21451038 intergenic not near genes chr3L 21451121 intergenic not near genes chr3L_19_21450001 chr3L_21450001 RAL-822 1644 chr3L 21501138 21501163 chr3L 21501267 21501292 1360 5 129 7.0 12.0 9.5 0.5 154 chr3L 21501138 intron Glg1 - chr3L 21501215 intron Glg1 - chr3L 21501292 intron Glg1 - chr3L_5_21500001 chr3L_21500001 RAL-822 1645 chr3L 21575762 21575807 chr3L 21575873 21575918 9 110 6.5 12.0 9.2 0.9 156 chr3L 21575762 3` UTR CG32441 + chr3L 21575840 3` UTR CG32441 + chr3L 21575918 intergenic CG32441 +,CR43939 - chr3L_9_21575001 chr3L_21575001 RAL-822 1646 chr3L 21639170 21639220 chr3L 21639278 21639307 12 101 7.5 7.0 7.2 1.5 137 chr3L 21639170 intergenic CG32444 +,CG32445 + chr3L 21639238 intergenic CG32445 +,CG32444 + chr3L 21639307 intergenic CG32445 +,CG32444 + chr3L_12_21635001 chr3L_21635001 RAL-822 1647 chr3L 21671051 21671085 chr3L 21671209 21671243 12 167 5.5 7.0 6.2 1.7 192 chr3L 21671051 intergenic not near genes chr3L 21671147 intergenic not near genes chr3L 21671243 intergenic not near genes chr3L_12_21670001 chr3L_21670001 RAL-822 1648 chr3L 21736366 21736374 chr3L 21736571 21736595 4 220 2.0 12.5 7.2 0.5 229 chr3L 21736366 intergenic CR43888 + chr3L 21736480 intergenic CR43888 + chr3L 21736595 intergenic CR43888 + chr3L_4_21735001 chr3L_21735001 RAL-822 1649 chr3L 21769020 21769086 chr3L 21769141 21769202 20 115 3.5 4.5 4.0 4.0 182 chr3L 21769020 intron,intron Syn1 -,CG42689 + chr3L 21769111 intron,intron Syn1 -,CG42689 + chr3L 21769202 intron,intron Syn1 -,CG42689 + chr3L_20_21765001 chr3L_21765001 RAL-822 1650 chr3L 21802838 21802847 chr3L 21803184 21803196 5 351 8.5 6.5 7.5 0.6 358 chr3L 21802838 intergenic not near genes chr3L 21803017 intergenic not near genes chr3L 21803196 intergenic not near genes chr3L_5_21800001 chr3L_21800001 RAL-822 1651 chr3L 21840823 21840865 chr3L 21840968 21840968 9 132 5.5 9.5 7.5 1.1 145 chr3L 21840823 intron P5CDh1 - chr3L 21840896 intron P5CDh1 - chr3L 21840968 intron P5CDh1 - chr3L_9_21840001 chr3L_21840001 RAL-822 1652 chr3L 21920392 21920431 chr3L 21920498 21920533 7 105 23.5 18.5 21.0 0.3 141 chr3L 21920392 intron mub + chr3L 21920462 intron mub + chr3L 21920533 intron mub + chr3L_7_21920001 chr3L_21920001 RAL-822 1653 chr3L 21932336 21932384 chr3L 21932442 21932487 10 109 5.0 7.5 6.2 1.4 151 chr3L 21932336 3` UTR mub + chr3L 21932412 3` UTR mub + chr3L 21932487 3` UTR mub + chr3L_10_21930001 chr3L_21930001 RAL-822 1654 chr3L 21950324 21950355 chr3L 21950436 21950463 6 105 14.0 14.0 14.0 0.4 139 chr3L 21950324 exon CG7448 + chr3L 21950394 exon CG7448 + chr3L 21950463 exon CG7448 + chr3L_6_21950001 chr3L_21950001 RAL-822 1655 chr3L 21990575 21990581 chr3L 21990784 21990796 4 213 10.5 14.5 12.5 0.3 221 chr3L 21990575 intergenic not near genes chr3L 21990686 intergenic not near genes chr3L 21990796 intergenic not near genes chr3L_4_21990001 chr3L_21990001 RAL-822 1656 chr3L 21994428 21994457 chr3L 21994544 21994573 6 114 16.0 22.0 19.0 0.3 145 chr3L 21994428 intergenic not near genes chr3L 21994500 intergenic not near genes chr3L 21994573 intergenic not near genes chr3L_6_21990001 chr3L_21990001 RAL-822 1657 chr3L 22058314 22058324 chr3L 22058616 22058635 4 308 10.5 13.5 12.0 0.3 321 chr3L 22058314 intron Oct-TyrR + chr3L 22058474 intron Oct-TyrR + chr3L 22058635 intron Oct-TyrR + chr3L_4_22055001 chr3L_22055001 RAL-822 1658 chr3L 22099650 22099703 chr3L 22105871 22105911 3S18 18 6218 5.5 7.5 6.5 2.4 6261 chr3L 22099650 intergenic not near genes chr3L 22102780 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_18_22100001 chr3L_22100001 RAL-822 1659 chr3L 22130469 22130514 chr3L 22130645 22130695 5 179 15.0 16.0 15.5 0.3 226 chr3L 22130469 intergenic not near genes chr3L 22130582 intergenic not near genes chr3L 22130695 intergenic not near genes chr3L_5_22130001 chr3L_22130001 RAL-822 1660 chr3L 22169433 22169486 chr3L 22169550 22169600 12 115 1.5 6.5 4.0 2.4 167 chr3L 22169433 intron olf413 + chr3L 22169516 intron olf413 + chr3L 22169600 intron olf413 + chr3L_12_22165001 chr3L_22165001 RAL-822 1661 chr3L 22350271 22350320 chr3L 22350391 22350440 12 116 12.0 7.5 9.8 1.1 169 chr3L 22350271 intron Ten-m - chr3L 22350356 intron Ten-m - chr3L 22350440 intron Ten-m - chr3L_12_22350001 chr3L_22350001 RAL-822 1662 chr3L 22360769 22360810 chr3L 22360875 22360886 7 106 7.5 2.5 5.0 1.2 117 chr3L 22360769 intron Ten-m - chr3L 22360828 intron Ten-m - chr3L 22360886 intron Ten-m - chr3L_7_22360001 chr3L_22360001 RAL-822 1663 chr3L 22361909 22361932 chr3L 22362021 22362027 4 108 9.5 2.5 6.0 0.6 118 chr3L 22361909 intron Ten-m - chr3L 22361968 intron Ten-m - chr3L 22362027 intron Ten-m - chr3L_4_22360001 chr3L_22360001 RAL-822 1664 chr3L 22366681 22366742 chr3L 22366794 22366855 9 109 6.5 9.5 8.0 1.0 174 chr3L 22366681 intron Ten-m - chr3L 22366768 intron Ten-m - chr3L 22366855 intron Ten-m - chr3L_9_22365001 chr3L_22365001 RAL-822 1665 chr3L 22447196 22447227 chr3L 22447291 22447328 17 106 2.0 5.5 3.8 3.5 132 chr3L 22447196 intergenic not near genes chr3L 22447262 intergenic not near genes chr3L 22447328 intergenic not near genes chr3L_17_22445001 chr3L_22445001 RAL-822 1666 chr3L 22478158 22478186 chr3L 22478430 22478443 4 266 8.5 1.5 5.0 0.7 285 chr3L 22478158 intergenic not near genes chr3L 22478300 intergenic not near genes chr3L 22478443 intergenic not near genes chr3L_4_22475001 chr3L_22475001 RAL-822 1667 chr3L 22478192 22478199 chr3L 22478417 22478439 4 242 6.5 1.5 4.0 0.8 247 chr3L 22478192 intergenic not near genes chr3L 22478316 intergenic not near genes chr3L 22478439 intergenic not near genes chr3L_4_22475001 chr3L_22475001 RAL-822 1668 chr3L 22555753 22555797 chr3L 22563240 22563261 blood 10 7491 3.0 2.5 2.8 2.6 7508 chr3L 22555753 intergenic not near genes chr3L 22559507 intergenic not near genes chr3L 22563261 intergenic not near genes chr3L_10_22555001 chr3L_22555001 RAL-822 1669 chr3L 22570409 22570457 chr3L 22570572 22570634 12 164 11.0 7.5 9.2 1.2 225 chr3L 22570409 intergenic not near genes chr3L 22570522 intergenic not near genes chr3L 22570634 intergenic not near genes chr3L_12_22570001 chr3L_22570001 RAL-822 1670 chr3L 22577619 22577646 chr3L 22582407 22582443 Doc 5 4801 3.0 2.5 2.8 1.3 4824 chr3L 22577619 intergenic not near genes chr3L 22580031 intergenic not near genes chr3L 22582443 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-822 1671 chr3L 22617169 22617189 chr3L 22624641 22624642 blood 11 7477 3.0 3.5 3.2 2.6 7473 chr3L 22617169 intron CG14459 - chr3L 22620906 intron CG14459 - chr3L 22624642 intron CG14459 - chr3L_11_22620001 chr3L_22620001 RAL-822 1672 chr3L 22617191 22617216 chr3L 22624640 22624703 blood 4 7466 2.5 3.0 2.8 1.1 7512 chr3L 22617191 intron CG14459 - chr3L 22620947 intron CG14459 - chr3L 22624703 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-822 1673 chr3L 22761365 22761409 chr3L 22766825 22766866 Ivk 9 5460 4.5 2.0 3.2 2.1 5501 chr3L 22761365 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766866 intron SPoCk + chr3L_9_22760001 chr3L_22760001 RAL-822 1674 chr3L 22850591 22850634 chr3L 22850863 22850912 9 273 12.0 12.0 12.0 0.7 321 chr3L 22850591 intron CR43426 + chr3L 22850752 intron CR43426 + chr3L 22850912 intron CR43426 + chr3L_9_22850001 chr3L_22850001 RAL-822 1675 chr3L 22853428 22853718 chr3L 22853549 22853838 12 113 1.5 4.0 2.8 3.2 410 chr3L 22853428 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853633 5` UTR CR43426 + chr3L 22853838 5` UTR CR43426 + chr3L_12_22850001 chr3L_22850001 RAL-822 1676 chr3L 22865963 22866006 chr3L 22867124 22867174 Doc 10 1167 3.0 5.5 4.2 1.9 1211 chr3L 22865963 intron CG33170 + chr3L 22866568 intron CG33170 + chr3L 22867174 intron CG33170 + chr3L_10_22865001 chr3L_22865001 RAL-822 1677 chr3L 19220633 19220636 chr3L 22908066 22908066 4 3687431 15.0 34.5 24.8 0.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-822 1678 chr3L 20525228 20525229 chr3L 22908066 22908066 6 2382837 10.0 34.5 22.2 0.3 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-822 1679 chr3L 22908066 22908066 chr3L 24821492 24821494 10 1913427 34.5 7.0 20.8 0.5 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_10_23860001 chr3L_23860001 RAL-822 1680 chr3L 22908067 22908067 chr3L 24821492 24821496 8 1913426 34.5 7.0 20.8 0.4 1913429 chr3L 22908067 intergenic not near genes chr3L 23864782 intron CG40470 - chr3L 24821496 intergenic not near genes chr3L_8_23860001 chr3L_23860001 RAL-822 1681 chr3L 22908989 22909046 chr3L 22909114 22909141 6 111 7.5 6.5 7.0 0.8 152 chr3L 22908989 intergenic CR45661 + chr3L 22909065 intergenic CR45661 + chr3L 22909141 intergenic CR45661 + chr3L_6_22905001 chr3L_22905001 RAL-822 1682 chr3L 22949166 22949222 chr3L 22949289 22949339 5 121 7.5 9.0 8.2 0.5 173 chr3L 22949166 intron Mes2 + chr3L 22949252 intron Mes2 + chr3L 22949339 intron Mes2 + chr3L_5_22945001 chr3L_22945001 RAL-822 1683 chr3L 22989850 22989878 chr3L 22996839 22996886 297 12 6994 3.5 4.5 4.0 2.4 7036 chr3L 22989850 intergenic not near genes chr3L 22993368 intergenic not near genes chr3L 22996886 intergenic not near genes chr3L_12_22990001 chr3L_22990001 RAL-822 1684 chr3L 23008166 23008233 chr3L 23008277 23008298 14 96 12.0 10.5 11.2 1.1 132 chr3L 23008166 intron nrm + chr3L 23008232 intron nrm + chr3L 23008298 intron nrm + chr3L_14_23005001 chr3L_23005001 RAL-822 1685 chr3L 23018499 23018537 chr3L 23018788 23018837 6 298 14.0 16.0 15.0 0.4 338 chr3L 23018499 intron nrm + chr3L 23018668 intron nrm + chr3L 23018837 intron nrm + chr3L_6_23015001 chr3L_23015001 RAL-822 1686 chr3L 23182816 23182846 chr3L 23182894 23182957 5 97 3.5 5.0 4.2 1.0 141 chr3L 23182816 intron CG34031 + chr3L 23182886 intron CG34031 + chr3L 23182957 intron CG34031 + chr3L_5_23180001 chr3L_23180001 RAL-822 1687 chr3L 23428249 23428268 chr3L 23428323 23428380 6 94 7.5 6.5 7.0 0.8 131 chr3L 23428249 intergenic not near genes chr3L 23428314 intergenic not near genes chr3L 23428380 intergenic not near genes chr3L_6_23425001 chr3L_23425001 RAL-822 1688 chr3L 23485850 23485881 chr3L 23485941 23485982 6 97 7.5 6.5 7.0 0.8 132 chr3L 23485850 intergenic not near genes chr3L 23485916 intergenic not near genes chr3L 23485982 intergenic not near genes chr3L_6_23485001 chr3L_23485001 RAL-822 1689 chr3L 23848823 23848838 chr3L 23849665 23849695 R1A1-element 6 852 5.5 8.0 6.8 0.8 872 chr3L 23848823 intron CG40470 - chr3L 23849259 intron CG40470 - chr3L 23849695 intron CG40470 - chr3L_6_23845001 chr3L_23845001 RAL-822 1690 chr3L 23913424 23913469 chr3L 23913550 23913580 6 120 9.5 13.5 11.5 0.5 156 chr3L 23913424 intron CG40470 - chr3L 23913502 intron CG40470 - chr3L 23913580 intron CG40470 - chr3L_6_23910001 chr3L_23910001 RAL-822 1691 chr3L 23932472 23932514 chr3L 23932628 23932660 5 144 11.5 13.5 12.5 0.4 188 chr3L 23932472 intron CG40470 - chr3L 23932566 intron CG40470 - chr3L 23932660 intron CG40470 - chr3L_5_23930001 chr3L_23930001 RAL-822 1692 chr3L 23973960 23974008 chr3L 23974468 23974488 Dm88 7 496 11.0 12.5 11.8 0.5 528 chr3L 23973960 intron CG40470 - chr3L 23974224 intron CG40470 - chr3L 23974488 intron CG40470 - chr3L_7_23970001 chr3L_23970001 RAL-822 1693 chr3L 23974522 23974566 chr3L 23979416 23979465 Cr1a 9 4899 23.5 37.0 30.2 0.3 4943 chr3L 23974522 intron CG40470 - chr3L 23976994 intron CG40470 - chr3L 23979465 intron CG40470 - chr3L_9_23975001 chr3L_23975001 RAL-822 1694 chr3L 24012395 24012409 chr3L 24020756 24020770 roo 4 8362 4.5 8.5 6.5 0.5 8375 chr3L 24012395 intergenic not near genes chr3L 24016582 intergenic not near genes chr3L 24020770 intergenic not near genes chr3L_4_24015001 chr3L_24015001 RAL-822 1695 chr3L 24012410 24012439 chr3L 24020751 24020767 roo 8 8348 1.0 7.5 4.2 1.5 8357 chr3L 24012410 intergenic not near genes chr3L 24016588 intergenic not near genes chr3L 24020767 intergenic not near genes chr3L_8_24015001 chr3L_24015001 RAL-822 1696 chr3L 24021266 24021309 chr3L 24022456 24022476 1360 4 1178 6.5 7.0 6.8 0.5 1210 chr3L 24021266 intergenic not near genes chr3L 24021871 intergenic not near genes chr3L 24022476 intergenic not near genes chr3L_4_24020001 chr3L_24020001 RAL-822 1697 chr3L 24791874 24791924 chr3L 24796681 24796708 Doc 12 4805 4.0 3.5 3.8 2.5 4834 chr3L 24791874 intergenic not near genes chr3L 24794291 intergenic not near genes chr3L 24796708 intergenic not near genes chr3L_12_24790001 chr3L_24790001 RAL-822 1698 chr3L 24811049 24811051 chr3L 24821492 24821494 mdg1 4 10443 9.0 7.0 8.0 0.4 10445 chr3L 24811049 intergenic not near genes chr3L 24816272 intergenic not near genes chr3L 24821494 intergenic not near genes chr3L_4_24815001 chr3L_24815001 RAL-822 1699 chr3L 18198930 18198931 chr3L 24821492 24821492 9 6622562 20.5 7.0 13.8 0.6 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_9_21510001 chr3L_21510001 RAL-822 1700 chr3L 20525229 20525230 chr3L 24821492 24821492 4 4296263 10.5 7.0 8.8 0.4 4296263 chr3L 20525229 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-822 1701 chr3L 18198930 18198931 chr3L 24821493 24821493 6 6622562 20.5 7.0 13.8 0.4 6622563 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-822 1702 chr3L 20525228 20525230 chr3L 24821493 24821493 4 4296264 10.5 7.0 8.8 0.4 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-822 1703 chr3L 18198931 18198931 chr3L 24821494 24821494 4 6622563 20.5 7.0 13.8 0.3 6622563 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-822 1704 chr3L 20525228 20525230 chr3L 24821494 24821494 5 4296265 10.5 7.0 8.8 0.5 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-822 1705 chr3L 27167958 27167976 chr3L 27168071 27168105 4 122 13.0 14.5 13.8 0.3 147 chr3L 27167958 intergenic not near genes chr3L 27168032 intergenic not near genes chr3L 27168105 intergenic not near genes chr3L_4_27165001 chr3L_27165001 RAL-822 1706 chr3L 27420725 27420744 chr3L 27423368 27423394 8 2644 28.0 6.0 17.0 0.4 2669 chr3L 27420725 exon Dbp80 + chr3L 27422060 exon Dbp80 + chr3L 27423394 intergenic not near genes chr3L_8_27420001 chr3L_27420001 RAL-822 1707 chr3L 27980661 27980691 chr3L 27985494 27985524 Doc 6 4826 20.5 3.5 12.0 0.5 4863 chr3L 27980661 intron CG17514 - chr3L 27983092 intron CG17514 - chr3L 27985524 intron CG17514 - chr3L_6_27980001 chr3L_27980001 RAL-822 1708 chr3R 1021768 1021821 chr3R 1022014 1022040 6 235 20.5 18.5 19.5 0.3 272 chr3R 1021768 intergenic not near genes chr3R 1021904 intergenic not near genes chr3R 1022040 intergenic not near genes chr3R_6_1020001 chr3R_1020001 RAL-822 1709 chr3R 1062374 1062411 chr3R 1062552 1062604 4 186 12.0 8.0 10.0 0.4 230 chr3R 1062374 intron CG15831 + chr3R 1062489 intron CG15831 + chr3R 1062604 intron CG15831 + chr3R_4_1060001 chr3R_1060001 RAL-822 1710 chr3R 1830777 1830810 chr3R 1830892 1830925 6 115 5.0 4.5 4.8 1.0 148 chr3R 1830777 intergenic not near genes chr3R 1830851 intergenic not near genes chr3R 1830925 intergenic not near genes chr3R_6_1830001 chr3R_1830001 RAL-822 1711 chr3R 4132867 4132922 chr3R 4133056 4133111 15 187 3.0 3.5 3.2 3.6 244 chr3R 4132867 intron Gfat1 + chr3R 4132989 intron Gfat1 + chr3R 4133111 intron Gfat1 + chr3R_15_4130001 chr3R_4130001 RAL-822 1712 chr3R 4206048 4206103 chr3R 4211648 4211698 mdg3 17 5600 6.5 3.5 5.0 2.8 5650 chr3R 4206048 intron CG14636 - chr3R 4208873 intron CG14636 - chr3R 4211698 intron CG14636 - chr3R_17_4205001 chr3R_4205001 RAL-822 1713 chr3R 4345068 4345096 chr3R 4345160 4345206 8 105 21.5 14.5 18.0 0.4 138 chr3R 4345068 3` UTR hkb - chr3R 4345137 3` UTR hkb - chr3R 4345206 3` UTR hkb - chr3R_8_4345001 chr3R_4345001 RAL-822 1714 chr3R 4366734 4366786 chr3R 4375142 4375186 roo 20 8405 5.5 6.5 6.0 2.9 8452 chr3R 4366734 3` UTR CG1090 + chr3R 4370960 intergenic not near genes chr3R 4375186 5` UTR CR44922 + chr3R_20_4370001 chr3R_4370001 RAL-822 1715 chr3R 4408393 4408434 chr3R 4412727 4412773 Juan 10 4332 10.5 9.5 10.0 0.9 4380 chr3R 4408393 intron CG32944 - chr3R 4410583 intron CG32944 - chr3R 4412773 intron CG32944 - chr3R_10_4410001 chr3R_4410001 RAL-822 1716 chr3R 4636609 4636648 chr3R 4636728 4636757 9 114 6.5 11.5 9.0 0.9 148 chr3R 4636609 intergenic not near genes chr3R 4636683 intergenic not near genes chr3R 4636757 intergenic not near genes chr3R_9_4635001 chr3R_4635001 RAL-822 1717 chr3R 4680691 4680732 chr3R 4680795 4680846 6 109 12.0 11.5 11.8 0.5 155 chr3R 4680691 intron CG43427 + chr3R 4680768 intron CG43427 + chr3R 4680846 intron CG43427 + chr3R_6_4680001 chr3R_4680001 RAL-822 1718 chr3R 4719446 4719493 chr3R 4719689 4719736 10 241 8.0 9.5 8.8 1.0 290 chr3R 4719446 intergenic Nep2 -,CR44923 - chr3R 4719591 3` UTR Nep2 - chr3R 4719736 3` UTR Nep2 - chr3R_10_4715001 chr3R_4715001 RAL-822 1719 chr3R 4733650 4733702 chr3R 4733798 4733861 12 156 22.0 19.0 20.5 0.6 211 chr3R 4733650 intergenic not near genes chr3R 4733756 intergenic not near genes chr3R 4733861 intergenic not near genes chr3R_12_4730001 chr3R_4730001 RAL-822 1720 chr3R 4753219 4753228 chr3R 4757545 4757554 F-element 7 4330 9.0 3.0 6.0 1.0 4335 chr3R 4753219 intron,intron atms +,CG44098 - chr3R 4755386 intron,intron atms +,CG44098 - chr3R 4757554 intron,exon atms +,CG44098 - chr3R_7_4755001 chr3R_4755001 RAL-822 1721 chr3R 4753235 4753260 chr3R 4757544 4757555 F-element 6 4314 7.0 3.0 5.0 1.0 4320 chr3R 4753235 intron,intron atms +,CG44098 - chr3R 4755395 intron,intron atms +,CG44098 - chr3R 4757555 intron,exon atms +,CG44098 - chr3R_6_4755001 chr3R_4755001 RAL-822 1722 chr3R 4759699 4759742 chr3R 4761231 4761252 hopper2 5 1519 6.0 7.5 6.8 0.6 1553 chr3R 4759699 intron,intron atms +,CG44098 - chr3R 4760476 intron,intron atms +,CG44098 - chr3R 4761252 intron,intron atms +,CG44098 - chr3R_5_4760001 chr3R_4760001 RAL-822 1723 chr3R 4769146 4769184 chr3R 4769236 4769291 8 102 6.5 4.0 5.2 1.3 145 chr3R 4769146 intron,intron atms +,CG44098 - chr3R 4769218 intron,intron atms +,CG44098 - chr3R 4769291 intron,intron atms +,CG44098 - chr3R_8_4765001 chr3R_4765001 RAL-822 1724 chr3R 4896264 4896318 chr3R 4896392 4896446 5 126 11.0 15.0 13.0 0.4 182 chr3R 4896264 intergenic CR45580 + chr3R 4896355 intergenic CR45580 + chr3R 4896446 5` UTR CR45580 + chr3R_5_4895001 chr3R_4895001 RAL-822 1725 chr3R 4905035 4905043 chr3R 4905150 4905196 5 142 10.5 7.0 8.8 0.5 161 chr3R 4905035 intergenic not near genes chr3R 4905116 intergenic not near genes chr3R 4905196 intergenic not near genes chr3R_5_4905001 chr3R_4905001 RAL-822 1726 chr3R 4943601 4943618 chr3R 4943716 4943758 5 132 11.0 2.5 6.8 0.6 157 chr3R 4943601 intron Cdep + chr3R 4943680 intron Cdep + chr3R 4943758 intron Cdep + chr3R_5_4940001 chr3R_4940001 RAL-822 1727 chr3R 4948368 4948391 chr3R 4949015 4949023 5 650 21.5 11.0 16.2 0.3 655 chr3R 4948368 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949023 3` UTR UbcD6 - chr3R_5_4945001 chr3R_4945001 RAL-822 1728 chr3R 4965969 4966036 chr3R 4966096 4966125 17 119 4.0 1.0 2.5 4.9 156 chr3R 4965969 intron CG1124 + chr3R 4966047 intron CG1124 + chr3R 4966125 intron CG1124 + chr3R_17_4965001 chr3R_4965001 RAL-822 1729 chr3R 4975901 4975961 chr3R 4976035 4976097 8 129 13.5 16.0 14.8 0.5 196 chr3R 4975901 intergenic not near genes chr3R 4975999 intergenic not near genes chr3R 4976097 intergenic not near genes chr3R_8_4975001 chr3R_4975001 RAL-822 1730 chr3R 5045825 5045878 chr3R 5052947 5053009 HMS-Beagle 12 7134 3.0 1.5 2.2 3.8 7184 chr3R 5045825 3` UTR CR43635 - chr3R 5049417 intergenic not near genes chr3R 5053009 intergenic CR45588 - chr3R_12_5045001 chr3R_5045001 RAL-822 1731 chr3R 5067975 5067980 chr3R 5073501 5073532 mdg3 5 5547 6.5 1.0 3.8 1.0 5557 chr3R 5067975 intergenic not near genes chr3R 5070754 intergenic not near genes chr3R 5073532 intergenic not near genes chr3R_5_5070001 chr3R_5070001 RAL-822 1732 chr3R 5067982 5068011 chr3R 5073496 5073556 mdg3 13 5540 2.5 0.5 1.5 5.2 5574 chr3R 5067982 intergenic not near genes chr3R 5070769 intergenic not near genes chr3R 5073556 intergenic not near genes chr3R_13_5070001 chr3R_5070001 RAL-822 1733 chr3R 5161919 5161967 chr3R 5162031 5162087 4 105 13.5 10.0 11.8 0.3 168 chr3R 5161919 intron dpr16 + chr3R 5162003 intron dpr16 + chr3R 5162087 intron dpr16 + chr3R_4_5160001 chr3R_5160001 RAL-822 1734 chr3R 5278070 5278117 chr3R 5278173 5278233 15 104 4.5 7.5 6.0 2.1 163 chr3R 5278070 intron mtd - chr3R 5278152 intron mtd - chr3R 5278233 intron mtd - chr3R_15_5275001 chr3R_5275001 RAL-822 1735 chr3R 5280153 5280163 chr3R 5280266 5280276 5 113 4.5 4.0 4.2 1.0 123 chr3R 5280153 intron mtd - chr3R 5280214 intron mtd - chr3R 5280276 intron mtd - chr3R_5_5280001 chr3R_5280001 RAL-822 1736 chr3R 5326861 5326911 chr3R 5327441 5327498 4 571 13.0 7.5 10.2 0.4 637 chr3R 5326861 intron mtd - chr3R 5327180 intron mtd - chr3R 5327498 intron mtd - chr3R_4_5325001 chr3R_5325001 RAL-822 1737 chr3R 5338381 5338431 chr3R 5343577 5343635 Rt1c 11 5202 8.5 7.0 7.8 1.2 5254 chr3R 5338381 intron mtd - chr3R 5341008 intron mtd - chr3R 5343635 intron mtd - chr3R_11_5340001 chr3R_5340001 RAL-822 1738 chr3R 5438768 5438811 chr3R 5438972 5439015 6 200 11.5 15.0 13.2 0.4 247 chr3R 5438768 intron CG14669 + chr3R 5438892 intron CG14669 + chr3R 5439015 intron CG14669 + chr3R_6_5435001 chr3R_5435001 RAL-822 1739 chr3R 5445932 5445952 chr3R 5452427 5452447 Burdock 4 6492 14.5 5.5 10.0 0.4 6515 chr3R 5445932 intron CG14669 + chr3R 5449190 intron CG14669 + chr3R 5452447 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-822 1740 chr3R 5445955 5445986 chr3R 5452423 5452451 Burdock 12 6489 8.5 5.0 6.8 1.5 6496 chr3R 5445955 intron CG14669 + chr3R 5449203 intron CG14669 + chr3R 5452451 intron CG14669 + chr3R_12_5445001 chr3R_5445001 RAL-822 1741 chr3R 5480203 5480233 chr3R 5480314 5480344 13 108 11.0 4.0 7.5 1.5 141 chr3R 5480203 intron,3` UTR Hcs +,ksr - chr3R 5480274 intron,3` UTR Hcs +,ksr - chr3R 5480344 intron,3` UTR Hcs +,ksr - chr3R_13_5480001 chr3R_5480001 RAL-822 1742 chr3R 5627139 5627162 chr3R 5627564 5627577 5 427 8.5 11.5 10.0 0.5 438 chr3R 5627139 intergenic not near genes chr3R 5627358 intergenic CG31551 + chr3R 5627577 intergenic CG31551 + chr3R_5_5625001 chr3R_5625001 RAL-822 1743 chr3R 5726061 5726121 chr3R 5726257 5726312 26 191 7.5 6.0 6.8 3.3 251 chr3R 5726061 intergenic not near genes chr3R 5726186 intergenic not near genes chr3R 5726312 intergenic not near genes chr3R_26_5725001 chr3R_5725001 RAL-822 1744 chr3R 5745995 5746044 chr3R 5746271 5746303 pogo 12 267 2.0 5.5 3.8 2.5 308 chr3R 5745995 3` UTR Madm + chr3R 5746149 3` UTR Madm + chr3R 5746303 3` UTR Madm + chr3R_12_5745001 chr3R_5745001 RAL-822 1745 chr3R 5746997 5747049 chr3R 5753213 5753223 diver 11 6218 4.0 7.5 5.8 1.6 6226 chr3R 5746997 intergenic Madm + chr3R 5750110 intergenic not near genes chr3R 5753223 intergenic CG2091 - chr3R_11_5750001 chr3R_5750001 RAL-822 1746 chr3R 5763315 5763348 chr3R 5763649 5763683 11 339 13.0 7.0 10.0 1.0 368 chr3R 5763315 intron CG2082 - chr3R 5763499 intron CG2082 - chr3R 5763683 intron CG2082 - chr3R_11_5760001 chr3R_5760001 RAL-822 1747 chr3R 5772347 5772400 chr3R 5772533 5772580 19 189 5.0 3.0 4.0 3.8 233 chr3R 5772347 intron CG2082 - chr3R 5772464 intron CG2082 - chr3R 5772580 intron CG2082 - chr3R_19_5770001 chr3R_5770001 RAL-822 1748 chr3R 5809084 5809133 chr3R 5809354 5809398 pogo 6 266 3.0 2.0 2.5 1.7 314 chr3R 5809084 3` UTR CG11000 + chr3R 5809241 3` UTR CG11000 + chr3R 5809398 3` UTR CG11000 + chr3R_6_5805001 chr3R_5805001 RAL-822 1749 chr3R 5822351 5822405 chr3R 5823553 5823578 1360 13 1198 4.5 4.0 4.2 2.5 1227 chr3R 5822351 3` UTR CG2023 - chr3R 5822964 3` UTR CG2023 - chr3R 5823578 3` UTR CG2023 - chr3R_13_5820001 chr3R_5820001 RAL-822 1750 chr3R 5895940 5895973 chr3R 5896176 5896197 5 234 2.0 8.5 5.2 0.8 257 chr3R 5895940 intron CG34113 - chr3R 5896068 intron CG34113 - chr3R 5896197 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-822 1751 chr3R 5927543 5927556 chr3R 5927807 5927831 pogo 6 268 5.0 5.0 5.0 1.0 288 chr3R 5927543 intron CG34113 - chr3R 5927687 intron CG34113 - chr3R 5927831 intron CG34113 - chr3R_6_5925001 chr3R_5925001 RAL-822 1752 chr3R 5927559 5927584 chr3R 5927802 5927848 pogo 12 261 3.5 4.0 3.8 2.5 289 chr3R 5927559 intron CG34113 - chr3R 5927704 intron CG34113 - chr3R 5927848 intron CG34113 - chr3R_12_5925001 chr3R_5925001 RAL-822 1753 chr3R 6015566 6015579 chr3R 6015666 6015691 4 109 14.5 18.0 16.2 0.2 125 chr3R 6015566 intergenic not near genes chr3R 6015628 intergenic not near genes chr3R 6015691 intergenic not near genes chr3R_4_6015001 chr3R_6015001 RAL-822 1754 chr3R 6081804 6081833 chr3R 6081934 6081963 4 130 19.0 14.5 16.8 0.2 159 chr3R 6081804 intergenic not near genes chr3R 6081884 intergenic not near genes chr3R 6081963 intergenic not near genes chr3R_4_6080001 chr3R_6080001 RAL-822 1755 chr3R 6121149 6121180 chr3R 6121369 6121423 BS 8 246 0.0 7.5 3.8 1.7 274 chr3R 6121149 intergenic not near genes chr3R 6121286 intergenic not near genes chr3R 6121423 intergenic not near genes chr3R_8_6120001 chr3R_6120001 RAL-822 1756 chr3R 6171116 6171178 chr3R 6171513 6171575 12 394 3.0 4.5 3.8 2.5 459 chr3R 6171116 intergenic not near genes chr3R 6171346 intergenic not near genes chr3R 6171575 intergenic not near genes chr3R_12_6170001 chr3R_6170001 RAL-822 1757 chr3R 6175141 6175199 chr3R 6182448 6182470 HMS-Beagle2 20 7297 3.0 2.5 2.8 5.3 7329 chr3R 6175141 intergenic Osi1 + chr3R 6178806 intron CR45194 + chr3R 6182470 intergenic CR45194 + chr3R_20_6175001 chr3R_6175001 RAL-822 1758 chr3R 6226591 6226644 chr3R 6226710 6226767 12 111 6.0 4.0 5.0 2.0 176 chr3R 6226591 intergenic not near genes chr3R 6226679 intergenic not near genes chr3R 6226767 intergenic not near genes chr3R_12_6225001 chr3R_6225001 RAL-822 1759 chr3R 6428781 6428828 chr3R 6428918 6428962 6 132 19.0 18.5 18.8 0.3 181 chr3R 6428781 intron gpp + chr3R 6428872 intron gpp + chr3R 6428962 intron gpp + chr3R_6_6425001 chr3R_6425001 RAL-822 1760 chr3R 6461572 6461609 chr3R 6461659 6461724 5 109 18.5 17.5 18.0 0.3 152 chr3R 6461572 intergenic not near genes chr3R 6461648 intergenic not near genes chr3R 6461724 intergenic not near genes chr3R_5_6460001 chr3R_6460001 RAL-822 1761 chr3R 6509994 6510045 chr3R 6515110 6515161 jockey 10 5114 6.5 6.0 6.2 1.4 5167 chr3R 6509994 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515161 intergenic not near genes chr3R_10_6510001 chr3R_6510001 RAL-822 1762 chr3R 6516111 6516155 chr3R 6516363 6516370 8 250 7.0 16.0 11.5 0.6 259 chr3R 6516111 intergenic not near genes chr3R 6516240 intergenic not near genes chr3R 6516370 intergenic not near genes chr3R_8_6515001 chr3R_6515001 RAL-822 1763 chr3R 6551080 6551140 chr3R 6551209 6551255 4 120 15.0 14.5 14.8 0.3 175 chr3R 6551080 intron dpr11 - chr3R 6551168 intron dpr11 - chr3R 6551255 intron dpr11 - chr3R_4_6550001 chr3R_6550001 RAL-822 1764 chr3R 6561925 6561971 chr3R 6562044 6562090 6 118 18.0 18.5 18.2 0.3 165 chr3R 6561925 intron dpr11 - chr3R 6562008 intron dpr11 - chr3R 6562090 intron dpr11 - chr3R_6_6560001 chr3R_6560001 RAL-822 1765 chr3R 6689316 6689365 chr3R 6689422 6689482 4 112 12.5 12.5 12.5 0.3 166 chr3R 6689316 intergenic Ccp84Af - chr3R 6689399 intergenic Ccp84Af - chr3R 6689482 intergenic Ccp84Af - chr3R_4_6685001 chr3R_6685001 RAL-822 1766 chr3R 6705664 6705710 chr3R 6705923 6705969 7 258 17.5 13.0 15.2 0.4 305 chr3R 6705664 intergenic not near genes chr3R 6705816 intergenic not near genes chr3R 6705969 intergenic not near genes chr3R_7_6705001 chr3R_6705001 RAL-822 1767 chr3R 6737495 6737516 chr3R 6739285 6739337 Doc 5 1799 1.5 0.5 1.0 2.5 1842 chr3R 6737495 intron pb - chr3R 6738416 intron pb - chr3R 6739337 intron pb - chr3R_5_6735001 chr3R_6735001 RAL-822 1768 chr3R 6755615 6755656 chr3R 6757017 6757048 5 1400 13.5 18.0 15.8 0.3 1433 chr3R 6755615 intergenic bcd - chr3R 6756332 3` UTR bcd - chr3R 6757048 intron bcd - chr3R_5_6755001 chr3R_6755001 RAL-822 1769 chr3R 6755314 6755363 chr3R 6757201 6757252 6 1893 28.0 33.0 30.5 0.2 1938 chr3R 6755314 intergenic not near genes chr3R 6756283 3` UTR bcd - chr3R 6757252 intron bcd - chr3R_6_6755001 chr3R_6755001 RAL-822 1770 chr3R 6806275 6806313 chr3R 6806384 6806408 4 106 16.5 17.0 16.8 0.2 133 chr3R 6806275 intergenic not near genes chr3R 6806342 intergenic not near genes chr3R 6806408 intergenic not near genes chr3R_4_6805001 chr3R_6805001 RAL-822 1771 chr3R 6807571 6807625 chr3R 6807905 6807959 5 333 18.0 15.0 16.5 0.3 388 chr3R 6807571 intergenic not near genes chr3R 6807765 intergenic not near genes chr3R 6807959 intergenic not near genes chr3R_5_6805001 chr3R_6805001 RAL-822 1772 chr3R 6836598 6836655 chr3R 6836736 6836758 4 126 14.0 8.0 11.0 0.3 160 chr3R 6836598 intron Scr - chr3R 6836678 intron Scr - chr3R 6836758 intron Scr - chr3R_4_6835001 chr3R_6835001 RAL-822 1773 chr3R 6846308 6846350 chr3R 6846410 6846438 12 106 6.5 5.5 6.0 1.7 130 chr3R 6846308 intron Scr - chr3R 6846373 intron Scr - chr3R 6846438 intron Scr - chr3R_12_6845001 chr3R_6845001 RAL-822 1774 chr3R 6856349 6856399 chr3R 6856501 6856550 17 147 3.5 6.0 4.8 2.9 201 chr3R 6856349 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856550 intergenic not near genes chr3R_17_6855001 chr3R_6855001 RAL-822 1775 chr3R 6858098 6858141 chr3R 6858216 6858257 5 118 13.0 9.5 11.2 0.4 159 chr3R 6858098 intergenic not near genes chr3R 6858178 intergenic not near genes chr3R 6858257 intergenic not near genes chr3R_5_6855001 chr3R_6855001 RAL-822 1776 chr3R 6862215 6862253 chr3R 6862315 6862344 4 107 7.0 9.5 8.2 0.4 129 chr3R 6862215 intergenic not near genes chr3R 6862280 intergenic not near genes chr3R 6862344 intergenic not near genes chr3R_4_6860001 chr3R_6860001 RAL-822 1777 chr3R 6891235 6891265 chr3R 6891331 6891336 4 88 8.5 10.5 9.5 0.4 101 chr3R 6891235 intergenic not near genes chr3R 6891286 intergenic not near genes chr3R 6891336 intergenic not near genes chr3R_4_6890001 chr3R_6890001 RAL-822 1778 chr3R 6958899 6958953 chr3R 6959144 6959199 9 237 17.5 17.5 17.5 0.5 300 chr3R 6958899 intron Antp - chr3R 6959049 intron Antp - chr3R 6959199 intron Antp - chr3R_9_6955001 chr3R_6955001 RAL-822 1779 chr3R 6978867 6978913 chr3R 6978966 6978990 4 97 3.5 0.5 2.0 1.3 123 chr3R 6978867 intron Antp - chr3R 6978928 intron Antp - chr3R 6978990 intron Antp - chr3R_4_6975001 chr3R_6975001 RAL-822 1780 chr3R 7103279 7103317 chr3R 7103363 7103382 8 77 4.5 5.0 4.8 1.4 103 chr3R 7103279 intron Alh - chr3R 7103330 intron Alh - chr3R 7103382 intron Alh - chr3R_8_7100001 chr3R_7100001 RAL-822 1781 chr3R 7126499 7126530 chr3R 7126618 7126659 10 127 7.0 10.5 8.8 1.0 160 chr3R 7126499 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126579 3` UTR CG10068 - chr3R 7126659 3` UTR CG10068 - chr3R_10_7125001 chr3R_7125001 RAL-822 1782 chr3R 7173652 7173702 chr3R 7173762 7173817 11 113 5.0 6.0 5.5 1.7 165 chr3R 7173652 intron sas + chr3R 7173734 intron sas + chr3R 7173817 intron sas + chr3R_11_7170001 chr3R_7170001 RAL-822 1783 chr3R 7210568 7210616 chr3R 7210680 7210727 7 110 17.0 16.5 16.8 0.4 159 chr3R 7210568 intergenic not near genes chr3R 7210648 intergenic not near genes chr3R 7210727 intergenic not near genes chr3R_7_7210001 chr3R_7210001 RAL-822 1784 chr3R 7217436 7217486 chr3R 7217682 7217742 9 252 11.0 5.5 8.2 1.0 306 chr3R 7217436 intergenic CG14605 -,CG14606 - chr3R 7217589 intergenic CG14605 - chr3R 7217742 exon CG14605 - chr3R_9_7215001 chr3R_7215001 RAL-822 1785 chr3R 7311551 7311559 chr3R 7311643 7311680 5 105 6.5 9.5 8.0 0.6 129 chr3R 7311551 intergenic not near genes chr3R 7311616 intergenic not near genes chr3R 7311680 intergenic not near genes chr3R_5_7310001 chr3R_7310001 RAL-822 1786 chr3R 7417311 7417341 chr3R 7417544 7417559 5 226 3.0 5.5 4.2 1.0 248 chr3R 7417311 intergenic not near genes chr3R 7417435 intergenic not near genes chr3R 7417559 intergenic not near genes chr3R_5_7415001 chr3R_7415001 RAL-822 1787 chr3R 7447961 7448012 chr3R 7448074 7448115 18 107 4.0 9.5 6.8 2.3 154 chr3R 7447961 intergenic not near genes chr3R 7448038 intergenic not near genes chr3R 7448115 intergenic not near genes chr3R_18_7445001 chr3R_7445001 RAL-822 1788 chr3R 7464662 7464714 chr3R 7464783 7464820 5 105 16.5 12.0 14.2 0.3 158 chr3R 7464662 intergenic not near genes chr3R 7464741 intergenic not near genes chr3R 7464820 intergenic not near genes chr3R_5_7460001 chr3R_7460001 RAL-822 1789 chr3R 7492590 7492615 chr3R 7492682 7492717 5 101 12.0 12.5 12.2 0.4 127 chr3R 7492590 intron alpha-Est10 - chr3R 7492654 intron alpha-Est10 - chr3R 7492717 intron alpha-Est10 - chr3R_5_7490001 chr3R_7490001 RAL-822 1790 chr3R 7542442 7542468 chr3R 7542554 7542570 7 109 5.5 6.0 5.8 1.0 128 chr3R 7542442 intron alpha-Est2 + chr3R 7542506 intron alpha-Est2 + chr3R 7542570 intron alpha-Est2 + chr3R_7_7540001 chr3R_7540001 RAL-822 1791 chr3R 7552955 7552993 chr3R 7553054 7553102 7 110 5.0 5.0 5.0 1.2 147 chr3R 7552955 intergenic not near genes chr3R 7553028 intergenic not near genes chr3R 7553102 intergenic not near genes chr3R_7_7550001 chr3R_7550001 RAL-822 1792 chr3R 7578716 7578722 chr3R 7578900 7578900 4 182 16.5 10.5 13.5 0.3 184 chr3R 7578716 intron CG34127 - chr3R 7578808 intron CG34127 - chr3R 7578900 intron CG34127 - chr3R_4_7575001 chr3R_7575001 RAL-822 1793 chr3R 7578724 7578762 chr3R 7578899 7578929 7 178 14.5 10.5 12.5 0.5 205 chr3R 7578724 intron CG34127 - chr3R 7578826 intron CG34127 - chr3R 7578929 intron CG34127 - chr3R_7_7575001 chr3R_7575001 RAL-822 1794 chr3R 7628283 7628308 chr3R 7628455 7628480 4 170 6.0 4.5 5.2 0.6 197 chr3R 7628283 intron CG34127 - chr3R 7628382 intron CG34127 - chr3R 7628480 intron CG34127 - chr3R_4_7625001 chr3R_7625001 RAL-822 1795 chr3R 7635638 7635683 chr3R 7635755 7635801 11 116 3.0 5.5 4.2 2.1 163 chr3R 7635638 intron CG34127 - chr3R 7635720 intron CG34127 - chr3R 7635801 intron CG34127 - chr3R_11_7635001 chr3R_7635001 RAL-822 1796 chr3R 7677888 7677943 chr3R 7678030 7678049 8 121 10.5 8.5 9.5 0.8 161 chr3R 7677888 intron Nlg1 + chr3R 7677968 intron Nlg1 + chr3R 7678049 intron Nlg1 + chr3R_8_7675001 chr3R_7675001 RAL-822 1797 chr3R 7694545 7694598 chr3R 7713641 7713694 invader3 20 19092 6.0 3.5 4.8 3.4 19149 chr3R 7694545 3` UTR Nlg1 + chr3R 7704120 intergenic not near genes chr3R 7713694 intergenic not near genes chr3R_20_7700001 chr3R_7700001 RAL-822 1798 chr3R 7729451 7729497 chr3R 7737402 7737440 Stalker2 13 7957 2.5 6.0 4.2 2.5 7989 chr3R 7729451 intergenic not near genes chr3R 7733446 intergenic not near genes chr3R 7737440 intergenic not near genes chr3R_13_7730001 chr3R_7730001 RAL-822 1799 chr3R 7774369 7774421 chr3R 7775490 7775537 6 1119 6.0 7.5 6.8 0.8 1168 chr3R 7774369 intergenic not near genes chr3R 7774953 intergenic not near genes chr3R 7775537 intergenic not near genes chr3R_6_7770001 chr3R_7770001 RAL-822 1800 chr3R 7821683 7821735 chr3R 7821814 7821866 8 128 16.0 10.5 13.2 0.6 183 chr3R 7821683 intron CG34384 + chr3R 7821774 intron CG34384 + chr3R 7821866 intron CG34384 + chr3R_8_7820001 chr3R_7820001 RAL-822 1801 chr3R 7840935 7840959 chr3R 7841076 7841127 5 160 4.0 12.5 8.2 0.5 192 chr3R 7840935 intron CG34384 + chr3R 7841031 intron CG34384 + chr3R 7841127 intron CG34384 + chr3R_5_7840001 chr3R_7840001 RAL-822 1802 chr3R 7849611 7849674 chr3R 7850813 7850845 1360 11 1187 2.0 6.0 4.0 2.2 1234 chr3R 7849611 intron CG34384 + chr3R 7850228 intron CG34384 + chr3R 7850845 intron CG34384 + chr3R_11_7850001 chr3R_7850001 RAL-822 1803 chr3R 7773344 7773344 chr3R 7890532 7890532 4 117188 17.5 6.0 11.8 0.3 117188 chr3R 7773344 intergenic not near genes chr3R 7831938 intron CG34384 + chr3R 7890532 intron mRpS9 - chr3R_4_7830001 chr3R_7830001 RAL-822 1804 chr3R 7951428 7951488 chr3R 7951562 7951591 13 125 25.5 24.0 24.8 0.5 163 chr3R 7951428 intron dsx - chr3R 7951510 intron dsx - chr3R 7951591 intron dsx - chr3R_13_7950001 chr3R_7950001 RAL-822 1805 chr3R 7973289 7973331 chr3R 7974386 7974428 1360 15 1095 4.5 6.5 5.5 2.3 1139 chr3R 7973289 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974428 3` UTR CD98hc - chr3R_15_7970001 chr3R_7970001 RAL-822 1806 chr3R 8033024 8033059 chr3R 8033120 8033176 4 101 14.5 17.0 15.8 0.2 152 chr3R 8033024 intergenic CG11035 -,unc-45 + chr3R 8033100 intergenic CG11035 -,unc-45 + chr3R 8033176 intergenic unc-45 +,CG11035 - chr3R_4_8030001 chr3R_8030001 RAL-822 1807 chr3R 8081128 8081172 chr3R 8081235 8081239 4 88 9.0 4.5 6.8 0.5 111 chr3R 8081128 intron mAChR-B + chr3R 8081184 intron mAChR-B + chr3R 8081239 intron mAChR-B + chr3R_4_8080001 chr3R_8080001 RAL-822 1808 chr3R 8090236 8090300 chr3R 8090448 8090512 19 208 4.5 2.5 3.5 4.2 276 chr3R 8090236 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090512 intergenic CR44330 + chr3R_19_8090001 chr3R_8090001 RAL-822 1809 chr3R 8094379 8094393 chr3R 8099718 8099731 Transpac 4 5338 12.0 4.0 8.0 0.4 5352 chr3R 8094379 intron CG7900 + chr3R 8097055 intron CG7900 + chr3R 8099731 intron CG7900 + chr3R_4_8095001 chr3R_8095001 RAL-822 1810 chr3R 8094395 8094440 chr3R 8099712 8099757 Transpac 9 5334 3.0 4.0 3.5 2.0 5362 chr3R 8094395 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099757 intron CG7900 + chr3R_9_8095001 chr3R_8095001 RAL-822 1811 chr3R 8207569 8207585 chr3R 8208399 8208422 F-element 4 843 2.5 3.0 2.8 1.1 853 chr3R 8207569 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208422 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-822 1812 chr3R 8403000 8403040 chr3R 8412179 8412190 roo 5 9174 2.0 4.0 3.0 1.2 9190 chr3R 8403000 intron CG45263 - chr3R 8407595 intron CG45263 - chr3R 8412190 intron CG45263 - chr3R_5_8405001 chr3R_8405001 RAL-822 1813 chr3R 8478056 8478107 chr3R 8478161 8478181 7 94 8.0 8.0 8.0 0.8 125 chr3R 8478056 intergenic CG45263 - chr3R 8478118 intergenic not near genes chr3R 8478181 intergenic not near genes chr3R_7_8475001 chr3R_8475001 RAL-822 1814 chr3R 8541331 8541368 chr3R 8541419 8541477 4 102 4.5 5.0 4.8 0.7 146 chr3R 8541331 intergenic not near genes chr3R 8541404 intergenic not near genes chr3R 8541477 intergenic not near genes chr3R_4_8540001 chr3R_8540001 RAL-822 1815 chr3R 8570455 8570502 chr3R 8575126 8575155 HMS-Beagle 8 4661 2.0 8.0 5.0 1.3 4700 chr3R 8570455 intergenic not near genes chr3R 8572805 intergenic not near genes chr3R 8575155 intergenic not near genes chr3R_8_8570001 chr3R_8570001 RAL-822 1816 chr3R 8576154 8576184 chr3R 8576335 8576390 7 192 12.5 11.5 12.0 0.5 236 chr3R 8576154 intergenic not near genes chr3R 8576272 intergenic not near genes chr3R 8576390 intergenic not near genes chr3R_7_8575001 chr3R_8575001 RAL-822 1817 chr3R 8601763 8601793 chr3R 8610921 8610961 roo 5 9155 3.0 3.5 3.2 1.2 9198 chr3R 8601763 intron 5-HT2B + chr3R 8606362 intron 5-HT2B + chr3R 8610961 intron 5-HT2B + chr3R_5_8605001 chr3R_8605001 RAL-822 1818 chr3R 8707325 8707375 chr3R 8709801 8709846 jockey 7 2469 0.5 3.5 2.0 2.3 2521 chr3R 8707325 intergenic not near genes chr3R 8708586 intergenic not near genes chr3R 8709846 intergenic not near genes chr3R_7_8705001 chr3R_8705001 RAL-822 1819 chr3R 8725132 8725146 chr3R 8725246 8725267 6 118 17.5 12.5 15.0 0.4 135 chr3R 8725132 3` UTR CG8145 + chr3R 8725200 3` UTR CG8145 + chr3R 8725267 3` UTR CG8145 + chr3R_6_8725001 chr3R_8725001 RAL-822 1820 chr3R 8745719 8745774 chr3R 8745864 8745920 15 144 12.0 13.5 12.8 1.1 201 chr3R 8745719 intron CG9801 - chr3R 8745820 intron CG9801 - chr3R 8745920 intron CG9801 - chr3R_15_8745001 chr3R_8745001 RAL-822 1821 chr3R 8768993 8769019 chr3R 8769276 8769311 5 290 6.0 15.5 10.8 0.4 318 chr3R 8768993 intergenic CG8236 + chr3R 8769152 intergenic CG8236 + chr3R 8769311 intergenic CG8236 + chr3R_5_8765001 chr3R_8765001 RAL-822 1822 chr3R 8883461 8883513 chr3R 8883689 8883717 4 217 7.0 4.0 5.5 0.6 256 chr3R 8883461 intron pyd - chr3R 8883589 intron pyd - chr3R 8883717 intron pyd - chr3R_4_8880001 chr3R_8880001 RAL-822 1823 chr3R 8885255 8885277 chr3R 8885384 8885406 7 127 13.0 13.0 13.0 0.5 151 chr3R 8885255 intron pyd - chr3R 8885330 intron pyd - chr3R 8885406 intron pyd - chr3R_7_8885001 chr3R_8885001 RAL-822 1824 chr3R 8894841 8894901 chr3R 8896031 8896075 1360 18 1180 4.5 5.5 5.0 3.0 1234 chr3R 8894841 intron pyd - chr3R 8895458 intron pyd - chr3R 8896075 intron pyd - chr3R_18_8895001 chr3R_8895001 RAL-822 1825 chr3R 8917859 8917908 chr3R 8917969 8918022 10 107 4.0 2.5 3.2 2.4 163 chr3R 8917859 intron pyd - chr3R 8917940 intron pyd - chr3R 8918022 intron pyd - chr3R_10_8915001 chr3R_8915001 RAL-822 1826 chr3R 9016738 9016773 chr3R 9016957 9016979 4 213 11.5 11.0 11.2 0.3 241 chr3R 9016738 3` UTR CG11986 + chr3R 9016858 3` UTR tgo - chr3R 9016979 3` UTR tgo - chr3R_4_9015001 chr3R_9015001 RAL-822 1827 chr3R 9036361 9036394 chr3R 9036474 9036497 6 111 19.5 21.5 20.5 0.3 136 chr3R 9036361 intron neur - chr3R 9036429 intron neur - chr3R 9036497 intron neur - chr3R_6_9035001 chr3R_9035001 RAL-822 1828 chr3R 9038782 9038820 chr3R 9038878 9038939 10 99 10.0 7.0 8.5 1.1 157 chr3R 9038782 intron,5` UTR neur -,hyx + chr3R 9038860 intron,5` UTR neur -,hyx + chr3R 9038939 intron,intron neur -,hyx + chr3R_10_9035001 chr3R_9035001 RAL-822 1829 chr3R 9069459 9069504 chr3R 9069573 9069603 5 108 19.0 14.5 16.8 0.3 144 chr3R 9069459 3` UTR pum - chr3R 9069531 3` UTR pum - chr3R 9069603 3` UTR pum - chr3R_5_9065001 chr3R_9065001 RAL-822 1830 chr3R 9073204 9073223 chr3R 9073300 9073338 4 102 13.0 11.0 12.0 0.3 134 chr3R 9073204 intron pum - chr3R 9073271 intron pum - chr3R 9073338 intron pum - chr3R_4_9070001 chr3R_9070001 RAL-822 1831 chr3R 9101822 9101869 chr3R 9101945 9101987 10 119 2.0 4.0 3.0 2.5 165 chr3R 9101822 intron pum - chr3R 9101904 intron pum - chr3R 9101987 intron pum - chr3R_10_9100001 chr3R_9100001 RAL-822 1832 chr3R 9107438 9107470 chr3R 9107570 9107608 4 128 10.5 11.5 11.0 0.3 170 chr3R 9107438 intron pum - chr3R 9107523 intron pum - chr3R 9107608 intron pum - chr3R_4_9105001 chr3R_9105001 RAL-822 1833 chr3R 9108834 9108881 chr3R 9108945 9108982 13 106 4.5 3.0 3.8 2.7 148 chr3R 9108834 intron pum - chr3R 9108908 intron pum - chr3R 9108982 intron pum - chr3R_13_9105001 chr3R_9105001 RAL-822 1834 chr3R 9131035 9131066 chr3R 9133895 9133936 6 2864 19.0 11.0 15.0 0.4 2901 chr3R 9131035 intron pum - chr3R 9132486 intron pum - chr3R 9133936 intron pum - chr3R_6_9130001 chr3R_9130001 RAL-822 1835 chr3R 9130227 9130282 chr3R 9135840 9135875 7 5601 16.5 18.0 17.2 0.4 5648 chr3R 9130227 intron pum - chr3R 9133051 intron pum - chr3R 9135875 intron pum - chr3R_7_9130001 chr3R_9130001 RAL-822 1836 chr3R 9141116 9141167 chr3R 9141225 9141286 20 112 4.5 5.0 4.8 3.4 170 chr3R 9141116 intron pum - chr3R 9141201 intron pum - chr3R 9141286 intron pum - chr3R_20_9140001 chr3R_9140001 RAL-822 1837 chr3R 9295001 9295024 chr3R 9295114 9295132 4 110 19.0 16.0 17.5 0.2 131 chr3R 9295001 3` UTR CG8861 - chr3R 9295066 3` UTR CG8861 - chr3R 9295132 3` UTR CG8861 - chr3R_4_9295001 chr3R_9295001 RAL-822 1838 chr3R 9319562 9319600 chr3R 9320020 9320064 jockey 10 462 7.5 4.5 6.0 1.4 502 chr3R 9319562 intron CG8861 - chr3R 9319813 intron CG8861 - chr3R 9320064 intron CG8861 - chr3R_10_9315001 chr3R_9315001 RAL-822 1839 chr3R 9361830 9361844 chr3R 9362096 9362126 pogo 7 274 5.5 9.0 7.2 0.9 296 chr3R 9361830 3` UTR CG45050 + chr3R 9361978 3` UTR CG45050 + chr3R 9362126 3` UTR CG45050 + chr3R_7_9360001 chr3R_9360001 RAL-822 1840 chr3R 9434672 9434712 chr3R 9434781 9434834 8 109 21.0 14.0 17.5 0.4 162 chr3R 9434672 intron ps + chr3R 9434753 intron ps + chr3R 9434834 intron ps + chr3R_8_9430001 chr3R_9430001 RAL-822 1841 chr3R 9599792 9599840 chr3R 9600001 9600035 7 194 5.0 12.0 8.5 0.7 243 chr3R 9599792 intron CG8312 + chr3R 9599914 intron CG8312 + chr3R 9600035 intron CG8312 + chr3R_7_9595001 chr3R_9595001 RAL-822 1842 chr3R 9611852 9611904 chr3R 9611959 9611994 10 108 7.0 0.0 3.5 2.2 142 chr3R 9611852 intron CG8312 + chr3R 9611923 intron CG8312 + chr3R 9611994 intron CG8312 + chr3R_10_9610001 chr3R_9610001 RAL-822 1843 chr3R 9829383 9829435 chr3R 9829503 9829551 12 117 11.0 13.5 12.2 0.9 168 chr3R 9829383 intron Teh1 - chr3R 9829467 intron Teh1 - chr3R 9829551 intron Teh1 - chr3R_12_9825001 chr3R_9825001 RAL-822 1844 chr3R 9885623 9885651 chr3R 9885742 9885770 5 118 17.0 21.5 19.2 0.2 147 chr3R 9885623 intron Glut4EF + chr3R 9885696 intron Glut4EF + chr3R 9885770 intron Glut4EF + chr3R_5_9885001 chr3R_9885001 RAL-822 1845 chr3R 10085933 10085967 chr3R 10086249 10086299 7 322 13.5 12.5 13.0 0.5 366 chr3R 10085933 intron CR45054 + chr3R 10086116 intron CR45054 + chr3R 10086299 intron CR45054 + chr3R_7_10085001 chr3R_10085001 RAL-822 1846 chr3R 10140407 10140465 chr3R 10140522 10140591 7 115 10.0 12.0 11.0 0.6 184 chr3R 10140407 3` UTR TAF1B - chr3R 10140499 3` UTR TAF1B - chr3R 10140591 3` UTR TAF1B - chr3R_7_10140001 chr3R_10140001 RAL-822 1847 chr3R 10183097 10183111 chr3R 10183198 10183218 5 106 3.0 3.0 3.0 1.2 121 chr3R 10183097 intron CG12814 - chr3R 10183158 intron CG12814 - chr3R 10183218 intron CG12814 - chr3R_5_10180001 chr3R_10180001 RAL-822 1848 chr3R 10231753 10231812 chr3R 10237360 10237403 mdg3 15 5604 3.5 6.0 4.8 2.6 5650 chr3R 10231753 intron CG42795 + chr3R 10234578 intron CG42795 + chr3R 10237403 intron CG42795 + chr3R_15_10230001 chr3R_10230001 RAL-822 1849 chr3R 10255372 10255386 chr3R 10260824 10260861 I-element 5 5470 12.0 5.0 8.5 0.5 5489 chr3R 10255372 3` UTR Sirt6 - chr3R 10258116 intron Sirt6 - chr3R 10260861 exon Sirt6 - chr3R_5_10255001 chr3R_10255001 RAL-822 1850 chr3R 10275561 10275581 chr3R 10275658 10275693 12 105 6.0 6.5 6.2 1.7 132 chr3R 10275561 intron CG43143 + chr3R 10275627 intron CG43143 + chr3R 10275693 intron CG43143 + chr3R_12_10275001 chr3R_10275001 RAL-822 1851 chr3R 10306966 10306985 chr3R 10312191 10312246 17 5234 20.0 28.0 24.0 0.7 5280 chr3R 10306966 exon CG43143 + chr3R 10309606 exon CG6293 - chr3R 10312246 3` UTR Bruce - chr3R_17_10305001 chr3R_10305001 RAL-822 1852 chr3R 10351068 10351107 chr3R 10351168 10351208 4 98 14.5 14.5 14.5 0.3 140 chr3R 10351068 intron jumu + chr3R 10351138 intron jumu + chr3R 10351208 intron jumu + chr3R_4_10350001 chr3R_10350001 RAL-822 1853 chr3R 10403012 10403050 chr3R 10403112 10403166 5 111 8.0 6.5 7.2 0.6 154 chr3R 10403012 3` UTR CG6325 - chr3R 10403089 3` UTR CG6325 - chr3R 10403166 3` UTR CG6325 - chr3R_5_10400001 chr3R_10400001 RAL-822 1854 chr3R 10536344 10536402 chr3R 10536458 10536516 19 111 5.5 6.0 5.8 2.8 172 chr3R 10536344 intron hth - chr3R 10536430 intron hth - chr3R 10536516 intron hth - chr3R_19_10535001 chr3R_10535001 RAL-822 1855 chr3R 10646090 10646134 chr3R 10646276 10646318 12 182 2.0 2.5 2.2 3.8 228 chr3R 10646090 intergenic CR44018 + chr3R 10646204 intergenic CR44018 + chr3R 10646318 intergenic not near genes chr3R_12_10645001 chr3R_10645001 RAL-822 1856 chr3R 10723764 10723789 chr3R 10723873 10723881 4 105 3.5 1.0 2.2 1.2 117 chr3R 10723764 intergenic not near genes chr3R 10723822 intergenic not near genes chr3R 10723881 intergenic not near genes chr3R_4_10720001 chr3R_10720001 RAL-822 1857 chr3R 10727627 10727661 chr3R 10727732 10727761 4 98 6.5 8.0 7.2 0.5 134 chr3R 10727627 intergenic not near genes chr3R 10727694 intergenic not near genes chr3R 10727761 intergenic not near genes chr3R_4_10725001 chr3R_10725001 RAL-822 1858 chr3R 10727665 10727677 chr3R 10727724 10727749 4 75 3.5 7.5 5.5 0.6 84 chr3R 10727665 intergenic not near genes chr3R 10727707 intergenic not near genes chr3R 10727749 intergenic not near genes chr3R_4_10725001 chr3R_10725001 RAL-822 1859 chr3R 10732298 10732339 chr3R 10733195 10733225 15 900 5.0 4.0 4.5 2.7 927 chr3R 10732298 intergenic not near genes chr3R 10732762 intergenic not near genes chr3R 10733225 intergenic not near genes chr3R_15_10730001 chr3R_10730001 RAL-822 1860 chr3R 10745401 10745452 chr3R 10745511 10745574 11 107 2.5 1.5 2.0 3.7 173 chr3R 10745401 intron TkR86C - chr3R 10745488 intron TkR86C - chr3R 10745574 intron TkR86C - chr3R_11_10745001 chr3R_10745001 RAL-822 1861 chr3R 10817190 10817245 chr3R 10817308 10817350 15 117 7.5 10.5 9.0 1.5 160 chr3R 10817190 3` UTR CG4089 + chr3R 10817270 3` UTR CG4089 + chr3R 10817350 3` UTR CG4089 + chr3R_15_10815001 chr3R_10815001 RAL-822 1862 chr3R 10919657 10919717 chr3R 10919762 10919828 11 109 6.5 1.0 3.8 2.3 171 chr3R 10919657 intergenic not near genes chr3R 10919742 intergenic not near genes chr3R 10919828 intergenic not near genes chr3R_11_10915001 chr3R_10915001 RAL-822 1863 chr3R 11052416 11052433 chr3R 11052496 11052501 5 80 3.5 2.0 2.8 1.3 85 chr3R 11052416 intergenic not near genes chr3R 11052458 intergenic not near genes chr3R 11052501 intergenic not near genes chr3R_5_11050001 chr3R_11050001 RAL-822 1864 chr3R 11085465 11085470 chr3R 11085540 11085575 4 95 6.0 3.5 4.8 0.7 110 chr3R 11085465 3` UTR CR44940 - chr3R 11085520 intergenic CR44940 - chr3R 11085575 intergenic CR44940 - chr3R_4_11085001 chr3R_11085001 RAL-822 1865 chr3R 11088632 11088698 chr3R 11088759 11088825 20 122 3.5 4.0 3.8 4.2 193 chr3R 11088632 exon CG43449 + chr3R 11088728 3` UTR CG43449 + chr3R 11088825 3` UTR CG43449 + chr3R_20_11085001 chr3R_11085001 RAL-822 1866 chr3R 11090820 11090876 chr3R 11090938 11090954 12 109 1.0 3.0 2.0 4.0 134 chr3R 11090820 intergenic not near genes chr3R 11090887 intergenic not near genes chr3R 11090954 intergenic not near genes chr3R_12_11090001 chr3R_11090001 RAL-822 1867 chr3R 11102322 11102350 chr3R 11102419 11102435 5 97 2.5 8.0 5.2 0.8 113 chr3R 11102322 intergenic not near genes chr3R 11102378 intergenic not near genes chr3R 11102435 intergenic not near genes chr3R_5_11100001 chr3R_11100001 RAL-822 1868 chr3R 11130115 11130146 chr3R 11130208 11130219 4 83 1.0 0.0 0.5 2.7 104 chr3R 11130115 intergenic not near genes chr3R 11130167 intergenic not near genes chr3R 11130219 intergenic not near genes chr3R_4_11130001 chr3R_11130001 RAL-822 1869 chr3R 11197980 11198017 chr3R 11198089 11198102 10 114 4.5 3.0 3.8 2.1 122 chr3R 11197980 intron cu + chr3R 11198041 intron cu + chr3R 11198102 intron cu + chr3R_10_11195001 chr3R_11195001 RAL-822 1870 chr3R 11248846 11248908 chr3R 11248990 11249026 10 132 3.5 3.0 3.2 2.4 180 chr3R 11248846 3` UTR CR43283 - chr3R 11248936 3` UTR CR43283 - chr3R 11249026 3` UTR CR43283 - chr3R_10_11245001 chr3R_11245001 RAL-822 1871 chr3R 11379221 11379246 chr3R 11388396 11388431 roo 8 9176 8.0 3.0 5.5 1.2 9210 chr3R 11379221 intron pros + chr3R 11383826 intron pros + chr3R 11388431 intron pros + chr3R_8_11380001 chr3R_11380001 RAL-822 1872 chr3R 11379247 11379268 chr3R 11388395 11388433 roo 4 9164 6.0 3.0 4.5 0.7 9186 chr3R 11379247 intron pros + chr3R 11383840 intron pros + chr3R 11388433 intron pros + chr3R_4_11380001 chr3R_11380001 RAL-822 1873 chr3R 11404908 11404948 chr3R 11405023 11405063 6 113 5.5 9.5 7.5 0.7 155 chr3R 11404908 3` UTR pros + chr3R 11404986 3` UTR pros + chr3R 11405063 3` UTR pros + chr3R_6_11400001 chr3R_11400001 RAL-822 1874 chr3R 11404950 11404972 chr3R 11405022 11405087 8 90 2.0 9.5 5.8 1.2 137 chr3R 11404950 3` UTR pros + chr3R 11405018 3` UTR pros + chr3R 11405087 3` UTR pros + chr3R_8_11405001 chr3R_11405001 RAL-822 1875 chr3R 11408719 11408780 chr3R 11408847 11408886 10 111 4.0 2.0 3.0 2.5 167 chr3R 11408719 3` UTR mRpL40 + chr3R 11408802 3` UTR mgr - chr3R 11408886 3` UTR mgr - chr3R_10_11405001 chr3R_11405001 RAL-822 1876 chr3R 11452053 11452095 chr3R 11452164 11452211 18 109 5.0 2.0 3.5 4.0 158 chr3R 11452053 intron CG17230 + chr3R 11452132 intron CG17230 + chr3R 11452211 intron CG17230 + chr3R_18_11450001 chr3R_11450001 RAL-822 1877 chr3R 11455544 11455605 chr3R 11455705 11455766 24 156 7.0 3.5 5.2 3.9 222 chr3R 11455544 intron,intron CG17230 +,PGRP-LB - chr3R 11455655 intron,intron CG17230 +,PGRP-LB - chr3R 11455766 intron,intron CG17230 +,PGRP-LB - chr3R_24_11455001 chr3R_11455001 RAL-822 1878 chr3R 11460559 11460575 chr3R 11460864 11460890 4 310 1.5 3.5 2.5 1.1 331 chr3R 11460559 intron CG17230 + chr3R 11460724 intron CG17230 + chr3R 11460890 intron CG17230 + chr3R_4_11460001 chr3R_11460001 RAL-822 1879 chr3R 11476926 11476963 chr3R 11477052 11477100 21 132 3.0 4.0 3.5 4.7 174 chr3R 11476926 intergenic not near genes chr3R 11477013 intergenic not near genes chr3R 11477100 intergenic not near genes chr3R_21_11475001 chr3R_11475001 RAL-822 1880 chr3R 11518794 11518821 chr3R 11518910 11518928 5 116 9.0 2.5 5.8 0.7 134 chr3R 11518794 intergenic not near genes chr3R 11518861 intergenic not near genes chr3R 11518928 intergenic not near genes chr3R_5_11515001 chr3R_11515001 RAL-822 1881 chr3R 11545944 11546002 chr3R 11546068 11546121 12 125 7.0 8.0 7.5 1.4 177 chr3R 11545944 intergenic not near genes chr3R 11546032 intergenic not near genes chr3R 11546121 intergenic not near genes chr3R_12_11545001 chr3R_11545001 RAL-822 1882 chr3R 11684646 11684661 chr3R 11687763 11687789 5 3132 2.5 3.0 2.8 1.3 3143 chr3R 11684646 intergenic CG6834 -,CG6830 - chr3R 11686218 exon CG6834 - chr3R 11687789 exon CG6834 - chr3R_5_11685001 chr3R_11685001 RAL-822 1883 chr3R 11694695 11694749 chr3R 11694823 11694877 16 121 3.5 4.0 3.8 3.3 182 chr3R 11694695 intergenic Fer3 - chr3R 11694786 intergenic Fer3 - chr3R 11694877 intergenic not near genes chr3R_16_11690001 chr3R_11690001 RAL-822 1884 chr3R 11708615 11708663 chr3R 11708843 11708906 15 238 3.0 1.5 2.2 4.7 291 chr3R 11708615 intergenic not near genes chr3R 11708760 intergenic not near genes chr3R 11708906 intergenic not near genes chr3R_15_11705001 chr3R_11705001 RAL-822 1885 chr3R 11853438 11853473 chr3R 11853589 11853649 15 176 0.5 0.0 0.2 12.5 211 chr3R 11853438 intron CG6959 - chr3R 11853544 intron CG6959 - chr3R 11853649 intron CG6959 - chr3R_15_11850001 chr3R_11850001 RAL-822 1886 chr3R 11957830 11957861 chr3R 11958138 11958158 S-element 4 305 4.0 0.0 2.0 1.3 328 chr3R 11957830 intergenic not near genes chr3R 11957994 intergenic not near genes chr3R 11958158 intergenic not near genes chr3R_4_11955001 chr3R_11955001 RAL-822 1887 chr3R 11998936 11998956 chr3R 11999086 11999093 4 147 5.5 7.0 6.2 0.6 157 chr3R 11998936 intron Tk - chr3R 11999014 intron Tk - chr3R 11999093 intron Tk - chr3R_4_11995001 chr3R_11995001 RAL-822 1888 chr3R 12017008 12017022 chr3R 12017120 12017120 4 108 4.0 5.0 4.5 0.7 112 chr3R 12017008 5` UTR CG3313 - chr3R 12017064 intergenic CG3313 -,Spt3 + chr3R 12017120 intergenic Spt3 +,CG3313 - chr3R_4_12015001 chr3R_12015001 RAL-822 1889 chr3R 12022855 12022910 chr3R 12025067 12025091 pogo 8 2204 5.0 2.5 3.8 1.7 2236 chr3R 12022855 intergenic not near genes chr3R 12023973 intergenic not near genes chr3R 12025091 intergenic not near genes chr3R_8_12020001 chr3R_12020001 RAL-822 1890 chr3R 12045153 12045172 chr3R 12045255 12045276 5 105 7.5 7.5 7.5 0.6 123 chr3R 12045153 intergenic not near genes chr3R 12045214 intergenic not near genes chr3R 12045276 intergenic not near genes chr3R_5_12045001 chr3R_12045001 RAL-822 1891 chr3R 12045174 12045200 chr3R 12045254 12045303 5 101 4.5 7.0 5.8 0.7 129 chr3R 12045174 intergenic not near genes chr3R 12045238 intergenic not near genes chr3R 12045303 intergenic not near genes chr3R_5_12045001 chr3R_12045001 RAL-822 1892 chr3R 12080847 12080889 chr3R 12080941 12080985 9 97 5.5 2.0 3.8 1.9 138 chr3R 12080847 intron CG14741 - chr3R 12080916 intron CG14741 - chr3R 12080985 intron CG14741 - chr3R_9_12080001 chr3R_12080001 RAL-822 1893 chr3R 12214345 12214361 chr3R 12214436 12214451 4 96 3.5 4.0 3.8 0.8 106 chr3R 12214345 3` UTR CG4848 - chr3R 12214398 3` UTR CG4848 - chr3R 12214451 3` UTR CG4848 - chr3R_4_12210001 chr3R_12210001 RAL-822 1894 chr3R 12247117 12247135 chr3R 12247234 12247254 4 114 4.5 3.0 3.8 0.8 137 chr3R 12247117 intergenic not near genes chr3R 12247186 intergenic not near genes chr3R 12247254 intergenic not near genes chr3R_4_12245001 chr3R_12245001 RAL-822 1895 chr3R 12247137 12247166 chr3R 12247225 12247269 9 109 3.0 2.0 2.5 2.6 132 chr3R 12247137 intergenic not near genes chr3R 12247203 intergenic not near genes chr3R 12247269 intergenic not near genes chr3R_9_12245001 chr3R_12245001 RAL-822 1896 chr3R 12299790 12299828 chr3R 12299898 12299956 15 115 5.0 1.0 3.0 3.8 166 chr3R 12299790 intron svp + chr3R 12299873 intron svp + chr3R 12299956 intron svp + chr3R_15_12295001 chr3R_12295001 RAL-822 1897 chr3R 12314223 12314259 chr3R 12314337 12314363 7 130 5.0 6.5 5.8 1.0 140 chr3R 12314223 intergenic not near genes chr3R 12314293 intergenic not near genes chr3R 12314363 intergenic not near genes chr3R_7_12310001 chr3R_12310001 RAL-822 1898 chr3R 12344132 12344156 chr3R 12344209 12344256 6 95 5.0 2.0 3.5 1.3 124 chr3R 12344132 intergenic not near genes chr3R 12344194 intergenic not near genes chr3R 12344256 intergenic not near genes chr3R_6_12340001 chr3R_12340001 RAL-822 1899 chr3R 12546430 12546440 chr3R 12546547 12546558 4 118 12.0 6.0 9.0 0.4 128 chr3R 12546430 intron Octbeta3R - chr3R 12546494 intron Octbeta3R - chr3R 12546558 intron Octbeta3R - chr3R_4_12545001 chr3R_12545001 RAL-822 1900 chr3R 12546443 12546477 chr3R 12546544 12546595 14 114 6.0 5.0 5.5 2.2 152 chr3R 12546443 intron Octbeta3R - chr3R 12546519 intron Octbeta3R - chr3R 12546595 intron Octbeta3R - chr3R_14_12545001 chr3R_12545001 RAL-822 1901 chr3R 12628608 12628631 chr3R 12628701 12628731 6 89 3.5 4.0 3.8 1.2 123 chr3R 12628608 intron Snx3 + chr3R 12628670 intron Snx3 + chr3R 12628731 intron Snx3 + chr3R_6_12625001 chr3R_12625001 RAL-822 1902 chr3R 12685407 12685447 chr3R 12685590 12685641 11 191 3.0 6.0 4.5 2.0 234 chr3R 12685407 intron kar - chr3R 12685524 intron kar - chr3R 12685641 intron kar - chr3R_11_12685001 chr3R_12685001 RAL-822 1903 chr3R 12763118 12763153 chr3R 12763200 12763243 12 102 4.0 3.0 3.5 2.7 125 chr3R 12763118 intron beat-Vc - chr3R 12763180 intron beat-Vc - chr3R 12763243 intron beat-Vc - chr3R_12_12760001 chr3R_12760001 RAL-822 1904 chr3R 12774610 12774673 chr3R 12774736 12774759 10 105 3.0 3.5 3.2 2.4 149 chr3R 12774610 intron beat-Vc - chr3R 12774684 intron beat-Vc - chr3R 12774759 intron beat-Vc - chr3R_10_12770001 chr3R_12770001 RAL-822 1905 chr3R 12787919 12787953 chr3R 12788032 12788069 19 114 5.0 4.5 4.8 3.3 150 chr3R 12787919 intergenic not near genes chr3R 12787994 intergenic not near genes chr3R 12788069 intergenic not near genes chr3R_19_12785001 chr3R_12785001 RAL-822 1906 chr3R 12796974 12796990 chr3R 12797079 12797117 10 127 2.0 3.5 2.8 2.6 143 chr3R 12796974 intergenic not near genes chr3R 12797046 intergenic not near genes chr3R 12797117 intergenic not near genes chr3R_10_12795001 chr3R_12795001 RAL-822 1907 chr3R 12814210 12814240 chr3R 12814322 12814327 5 106 7.5 2.5 5.0 0.8 117 chr3R 12814210 intron CG31345 - chr3R 12814268 intron CG31345 - chr3R 12814327 intron CG31345 - chr3R_5_12810001 chr3R_12810001 RAL-822 1908 chr3R 12814248 12814268 chr3R 12814321 12814346 7 92 4.0 2.0 3.0 1.8 98 chr3R 12814248 intron CG31345 - chr3R 12814297 intron CG31345 - chr3R 12814346 intron CG31345 - chr3R_7_12810001 chr3R_12810001 RAL-822 1909 chr3R 12864543 12864588 chr3R 12865063 12865108 roo 6 519 0.5 3.0 1.8 2.1 565 chr3R 12864543 intergenic not near genes chr3R 12864826 intergenic not near genes chr3R 12865108 intergenic not near genes chr3R_6_12860001 chr3R_12860001 RAL-822 1910 chr3R 12866460 12866520 chr3R 12866646 12866700 14 181 3.0 4.0 3.5 3.1 240 chr3R 12866460 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866700 intergenic not near genes chr3R_14_12865001 chr3R_12865001 RAL-822 1911 chr3R 12894584 12894620 chr3R 12894716 12894768 6 139 0.0 0.5 0.2 5.0 184 chr3R 12894584 intergenic not near genes chr3R 12894676 intergenic not near genes chr3R 12894768 intergenic not near genes chr3R_6_12890001 chr3R_12890001 RAL-822 1912 chr3R 12983066 12983117 chr3R 12983169 12983214 9 98 3.0 2.5 2.8 2.4 148 chr3R 12983066 intron Paip2 + chr3R 12983140 intron Paip2 + chr3R 12983214 intron Paip2 + chr3R_9_12980001 chr3R_12980001 RAL-822 1913 chr3R 13064750 13064791 chr3R 13064882 13064923 5 131 0.0 0.0 0.0 5.0 173 chr3R 13064750 intron sim + chr3R 13064836 intron sim + chr3R 13064923 intron sim + chr3R_5_13060001 chr3R_13060001 RAL-822 1914 chr3R 13073942 13074003 chr3R 13074056 13074084 7 105 0.5 1.5 1.0 3.5 142 chr3R 13073942 intron sim + chr3R 13074013 intron sim + chr3R 13074084 exon sim + chr3R_7_13070001 chr3R_13070001 RAL-822 1915 chr3R 13075330 13075382 chr3R 13075446 13075488 12 112 6.0 0.0 3.0 3.0 158 chr3R 13075330 intron sim + chr3R 13075409 intron sim + chr3R 13075488 intron sim + chr3R_12_13075001 chr3R_13075001 RAL-822 1916 chr3R 13135803 13135824 chr3R 13138003 13138024 pogo 5 2199 3.5 4.5 4.0 1.0 2221 chr3R 13135803 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136914 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138024 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13135001 chr3R_13135001 RAL-822 1917 chr3R 7773344 7773344 chr3R 13217322 13217322 8 5443978 17.5 8.5 13.0 0.6 5443978 chr3R 7773344 intergenic not near genes chr3R 10495333 intergenic not near genes chr3R 13217322 intergenic not near genes chr3R_8_10495001 chr3R_10495001 RAL-822 1918 chr3R 13314067 13314125 chr3R 13318889 13318937 Doc 15 4817 6.0 9.5 7.8 1.7 4870 chr3R 13314067 intergenic not near genes chr3R 13316502 intergenic not near genes chr3R 13318937 intergenic CG45080 - chr3R_15_13315001 chr3R_13315001 RAL-822 1919 chr3R 13418639 13418683 chr3R 13418743 13418794 11 107 3.0 5.0 4.0 2.2 155 chr3R 13418639 intergenic not near genes chr3R 13418716 intergenic not near genes chr3R 13418794 intergenic not near genes chr3R_11_13415001 chr3R_13415001 RAL-822 1920 chr3R 13517215 13517246 chr3R 13520039 13520098 jockey 8 2845 5.5 1.5 3.5 1.8 2883 chr3R 13517215 intergenic not near genes chr3R 13518656 intergenic not near genes chr3R 13520098 intergenic not near genes chr3R_8_13515001 chr3R_13515001 RAL-822 1921 chr3R 13594025 13594057 chr3R 13594121 13594130 5 90 2.5 6.0 4.2 1.0 105 chr3R 13594025 intergenic not near genes chr3R 13594078 intergenic not near genes chr3R 13594130 intergenic not near genes chr3R_5_13590001 chr3R_13590001 RAL-822 1922 chr3R 13619442 13619466 chr3R 13619553 13619600 7 119 6.5 1.0 3.8 1.5 158 chr3R 13619442 intergenic not near genes chr3R 13619521 intergenic not near genes chr3R 13619600 intergenic not near genes chr3R_7_13615001 chr3R_13615001 RAL-822 1923 chr3R 13625656 13625721 chr3R 13625772 13625837 14 115 3.0 3.0 3.0 3.5 181 chr3R 13625656 intergenic not near genes chr3R 13625746 intergenic not near genes chr3R 13625837 intergenic not near genes chr3R_14_13625001 chr3R_13625001 RAL-822 1924 chr3R 13693028 13693029 chr3R 21907534 21907536 4 8214507 22.5 15.0 18.8 0.2 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_4_17800001 chr3R_17800001 RAL-822 1925 chr3R 13707300 13707315 chr3R 13707407 13707410 5 105 2.0 2.0 2.0 1.7 110 chr3R 13707300 intron Adgf-C + chr3R 13707355 intron Adgf-C + chr3R 13707410 intron Adgf-C + chr3R_5_13705001 chr3R_13705001 RAL-822 1926 chr3R 13863675 13863700 chr3R 13863767 13863818 4 103 6.0 2.0 4.0 0.8 143 chr3R 13863675 intergenic not near genes chr3R 13863746 intergenic not near genes chr3R 13863818 intergenic not near genes chr3R_4_13860001 chr3R_13860001 RAL-822 1927 chr3R 13923412 13923470 chr3R 13923524 13923548 4 100 4.0 3.5 3.8 0.8 136 chr3R 13923412 intergenic not near genes chr3R 13923480 intergenic not near genes chr3R 13923548 intergenic not near genes chr3R_4_13920001 chr3R_13920001 RAL-822 1928 chr3R 13975344 13975398 chr3R 13975458 13975512 11 100 6.5 2.5 4.5 2.0 168 chr3R 13975344 intron rdx - chr3R 13975428 intron rdx - chr3R 13975512 intron rdx - chr3R_11_13975001 chr3R_13975001 RAL-822 1929 chr3R 14035277 14035333 chr3R 14035393 14035438 16 109 3.5 6.5 5.0 2.7 161 chr3R 14035277 exon CG9922 - chr3R 14035358 intron CG9922 - chr3R 14035438 intron CG9922 - chr3R_16_14035001 chr3R_14035001 RAL-822 1930 chr3R 14047738 14047770 chr3R 14047863 14047896 11 126 6.0 5.0 5.5 1.7 158 chr3R 14047738 intergenic not near genes chr3R 14047817 intergenic not near genes chr3R 14047896 intergenic not near genes chr3R_11_14045001 chr3R_14045001 RAL-822 1931 chr3R 14058090 14058145 chr3R 14058245 14058300 10 154 2.0 5.0 3.5 2.2 210 chr3R 14058090 5` UTR foxo + chr3R 14058195 intron foxo + chr3R 14058300 intron foxo + chr3R_10_14055001 chr3R_14055001 RAL-822 1932 chr3R 14109063 14109109 chr3R 14109172 14109225 7 114 1.5 4.5 3.0 1.8 162 chr3R 14109063 intergenic CR44237 -,Or88a + chr3R 14109144 intergenic CR44237 -,Or88a + chr3R 14109225 intergenic CR44237 -,Or88a + chr3R_7_14105001 chr3R_14105001 RAL-822 1933 chr3R 14180816 14180838 chr3R 14185576 14185638 F-element 8 4770 2.0 0.0 1.0 4.0 4822 chr3R 14180816 intron Dop1R1 - chr3R 14183227 intron Dop1R1 - chr3R 14185638 intron Dop1R1 - chr3R_8_14180001 chr3R_14180001 RAL-822 1934 chr3R 14194453 14194460 chr3R 14203617 14203619 roo 4 9163 1.0 0.0 0.5 2.7 9166 chr3R 14194453 intron Dop1R1 - chr3R 14199036 intron Dop1R1 - chr3R 14203619 intron Dop1R1 - chr3R_4_14195001 chr3R_14195001 RAL-822 1935 chr3R 14246413 14246418 chr3R 14247889 14247949 jockey 5 1495 1.5 3.5 2.5 1.4 1536 chr3R 14246413 intergenic not near genes chr3R 14247181 intergenic not near genes chr3R 14247949 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-822 1936 chr3R 14248694 14248730 chr3R 14248805 14248838 6 110 0.5 5.0 2.8 1.6 144 chr3R 14248694 intergenic not near genes chr3R 14248766 intergenic not near genes chr3R 14248838 intergenic not near genes chr3R_6_14245001 chr3R_14245001 RAL-822 1937 chr3R 14386194 14386236 chr3R 14386303 14386329 4 110 0.0 5.5 2.8 1.1 135 chr3R 14386194 intergenic not near genes chr3R 14386262 intergenic not near genes chr3R 14386329 intergenic not near genes chr3R_4_14385001 chr3R_14385001 RAL-822 1938 chr3R 14440702 14440752 chr3R 14440800 14440863 16 105 2.5 3.5 3.0 4.0 161 chr3R 14440702 intron cv-c - chr3R 14440782 intron cv-c - chr3R 14440863 intron cv-c - chr3R_16_14440001 chr3R_14440001 RAL-822 1939 chr3R 14458705 14458754 chr3R 14458811 14458837 13 104 1.5 1.5 1.5 5.2 132 chr3R 14458705 intron cv-c - chr3R 14458771 intron cv-c - chr3R 14458837 intron cv-c - chr3R_13_14455001 chr3R_14455001 RAL-822 1940 chr3R 14482409 14482416 chr3R 14482511 14482533 6 108 3.5 6.5 5.0 1.0 124 chr3R 14482409 intergenic not near genes chr3R 14482471 intergenic not near genes chr3R 14482533 intergenic not near genes chr3R_6_14480001 chr3R_14480001 RAL-822 1941 chr3R 14527399 14527410 chr3R 14527478 14527522 4 92 6.0 4.5 5.2 0.6 123 chr3R 14527399 intron Pde6 - chr3R 14527460 intron Pde6 - chr3R 14527522 intron Pde6 - chr3R_4_14525001 chr3R_14525001 RAL-822 1942 chr3R 14543571 14543585 chr3R 14543686 14543700 5 114 7.5 11.5 9.5 0.5 129 chr3R 14543571 intron Pde6 - chr3R 14543636 intron Pde6 - chr3R 14543700 intron Pde6 - chr3R_5_14540001 chr3R_14540001 RAL-822 1943 chr3R 14543594 14543625 chr3R 14543679 14543711 11 105 2.5 9.0 5.8 1.6 117 chr3R 14543594 intron Pde6 - chr3R 14543652 intron Pde6 - chr3R 14543711 intron Pde6 - chr3R_11_14540001 chr3R_14540001 RAL-822 1944 chr3R 14546046 14546072 chr3R 14546123 14546184 8 103 4.5 0.0 2.2 2.5 138 chr3R 14546046 intron Pde6 - chr3R 14546115 intron Pde6 - chr3R 14546184 intron Pde6 - chr3R_8_14545001 chr3R_14545001 RAL-822 1945 chr3R 14556570 14556593 chr3R 14556677 14556696 6 111 5.0 2.5 3.8 1.2 126 chr3R 14556570 intron Pde6 - chr3R 14556633 intron Pde6 - chr3R 14556696 intron Pde6 - chr3R_6_14555001 chr3R_14555001 RAL-822 1946 chr3R 14560640 14560674 chr3R 14560870 14560902 11 228 0.0 1.0 0.5 7.3 262 chr3R 14560640 intergenic CG14850 + chr3R 14560771 intergenic CG14850 + chr3R 14560902 intergenic CG14850 + chr3R_11_14560001 chr3R_14560001 RAL-822 1947 chr3R 14577925 14577938 chr3R 14578076 14578089 5 151 11.0 2.5 6.8 0.6 164 chr3R 14577925 intron stumps + chr3R 14578007 intron stumps + chr3R 14578089 intron stumps + chr3R_5_14575001 chr3R_14575001 RAL-822 1948 chr3R 14577943 14577987 chr3R 14578074 14578122 17 144 4.0 2.5 3.2 4.0 179 chr3R 14577943 intron stumps + chr3R 14578032 intron stumps + chr3R 14578122 intron stumps + chr3R_17_14575001 chr3R_14575001 RAL-822 1949 chr3R 14579325 14579362 chr3R 14579438 14579486 5 111 9.0 1.0 5.0 0.8 161 chr3R 14579325 intron stumps + chr3R 14579406 intron stumps + chr3R 14579486 intron stumps + chr3R_5_14575001 chr3R_14575001 RAL-822 1950 chr3R 14608441 14608477 chr3R 14608566 14608592 12 118 1.5 7.5 4.5 2.2 151 chr3R 14608441 intergenic stumps + chr3R 14608516 intergenic stumps + chr3R 14608592 intergenic not near genes chr3R_12_14605001 chr3R_14605001 RAL-822 1951 chr3R 14664847 14664910 chr3R 14664959 14664997 21 102 5.0 5.5 5.2 3.4 150 chr3R 14664847 intergenic BigH1 +,Meltrin - chr3R 14664922 3` UTR Meltrin - chr3R 14664997 3` UTR Meltrin - chr3R_21_14660001 chr3R_14660001 RAL-822 1952 chr3R 14704373 14704415 chr3R 14704465 14704510 12 98 5.0 4.5 4.8 2.1 137 chr3R 14704373 intron kibra - chr3R 14704442 intron kibra - chr3R 14704510 intron kibra - chr3R_12_14700001 chr3R_14700001 RAL-822 1953 chr3R 14764537 14764585 chr3R 14764670 14764695 4 128 5.0 2.5 3.8 0.8 158 chr3R 14764537 intron jvl + chr3R 14764616 intron jvl + chr3R 14764695 intron jvl + chr3R_4_14760001 chr3R_14760001 RAL-822 1954 chr3R 14837814 14837847 chr3R 14837915 14837955 9 107 5.5 3.0 4.2 1.7 141 chr3R 14837814 intron btsz - chr3R 14837884 intron btsz - chr3R 14837955 intron btsz - chr3R_9_14835001 chr3R_14835001 RAL-822 1955 chr3R 14866866 14866915 chr3R 14866979 14867018 10 108 6.5 6.0 6.2 1.4 152 chr3R 14866866 intron btsz - chr3R 14866942 intron btsz - chr3R 14867018 intron btsz - chr3R_10_14865001 chr3R_14865001 RAL-822 1956 chr3R 15041401 15041411 chr3R 15045199 15045199 Doc 8 3798 8.0 4.0 6.0 1.1 3798 chr3R 15041401 intergenic not near genes chr3R 15043300 intergenic not near genes chr3R 15045199 intergenic not near genes chr3R_8_15040001 chr3R_15040001 RAL-822 1957 chr3R 15041415 15041450 chr3R 15045195 15045245 Doc 9 3797 2.0 3.0 2.5 2.6 3830 chr3R 15041415 intergenic not near genes chr3R 15043330 intergenic not near genes chr3R 15045245 intergenic not near genes chr3R_9_15040001 chr3R_15040001 RAL-822 1958 chr3R 15059250 15059476 chr3R 15059477 15059592 BS 10 178 0.5 0.5 0.5 6.7 342 chr3R 15059250 intron dpr9 - chr3R 15059421 intron dpr9 - chr3R 15059592 intron dpr9 - chr3R_10_15055001 chr3R_15055001 RAL-822 1959 chr3R 15078304 15078369 chr3R 15078422 15078484 14 104 1.0 4.0 2.5 4.0 180 chr3R 15078304 intergenic CG6974 - chr3R 15078394 intergenic CG6974 - chr3R 15078484 intergenic CG6974 - chr3R_14_15075001 chr3R_15075001 RAL-822 1960 chr3R 15079771 15079803 chr3R 15080047 15080077 pogo 9 274 14.0 0.0 7.0 1.1 306 chr3R 15079771 3` UTR CG6966 - chr3R 15079924 3` UTR CG6966 - chr3R 15080077 3` UTR CG6966 - chr3R_9_15075001 chr3R_15075001 RAL-822 1961 chr3R 15084130 15084160 chr3R 15084287 15084325 8 160 2.0 7.0 4.5 1.5 195 chr3R 15084130 intron CG6966 - chr3R 15084228 intron CG6966 - chr3R 15084325 intron CG6966 - chr3R_8_15080001 chr3R_15080001 RAL-822 1962 chr3R 15102466 15102525 chr3R 15109756 15109815 412 14 7289 5.5 7.0 6.2 1.9 7349 chr3R 15102466 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109815 intron CG42788 - chr3R_14_15105001 chr3R_15105001 RAL-822 1963 chr3R 15114880 15114919 chr3R 15114992 15115030 5 109 8.5 3.5 6.0 0.7 150 chr3R 15114880 intron CG42788 - chr3R 15114955 intron CG42788 - chr3R 15115030 intron CG42788 - chr3R_5_15110001 chr3R_15110001 RAL-822 1964 chr3R 15127746 15127809 chr3R 15127862 15127914 10 111 0.0 2.5 1.2 4.5 168 chr3R 15127746 intron CG42788 - chr3R 15127830 intron CG42788 - chr3R 15127914 intron CG42788 - chr3R_10_15125001 chr3R_15125001 RAL-822 1965 chr3R 15132063 15132075 chr3R 15135125 15135134 Juan 7 3076 6.0 8.0 7.0 0.9 3071 chr3R 15132063 intergenic CG42788 - chr3R 15133598 intergenic not near genes chr3R 15135134 intergenic CG6912 - chr3R_7_15130001 chr3R_15130001 RAL-822 1966 chr3R 15156190 15156212 chr3R 15156372 15156394 11 179 4.5 1.5 3.0 2.8 204 chr3R 15156190 intron Gyc88E + chr3R 15156292 intron Gyc88E + chr3R 15156394 intron Gyc88E + chr3R_11_15155001 chr3R_15155001 RAL-822 1967 chr3R 15160540 15160560 chr3R 15160672 15160693 8 131 6.0 3.5 4.8 1.4 153 chr3R 15160540 intron Gyc88E + chr3R 15160616 intron Gyc88E + chr3R 15160693 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 RAL-822 1968 chr3R 15160563 15160594 chr3R 15160664 15160727 8 126 3.5 3.0 3.2 1.9 164 chr3R 15160563 intron Gyc88E + chr3R 15160645 intron Gyc88E + chr3R 15160727 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 RAL-822 1969 chr3R 15162532 15162571 chr3R 15167329 15167373 F-element 10 4797 7.5 7.0 7.2 1.2 4841 chr3R 15162532 intron Gyc88E + chr3R 15164952 intron Gyc88E + chr3R 15167373 intron Gyc88E + chr3R_10_15160001 chr3R_15160001 RAL-822 1970 chr3R 15180872 15180887 chr3R 15180993 15181008 7 117 8.0 0.0 4.0 1.4 136 chr3R 15180872 intron Gyc88E + chr3R 15180940 intron Gyc88E + chr3R 15181008 intron Gyc88E + chr3R_7_15180001 chr3R_15180001 RAL-822 1971 chr3R 15184522 15184562 chr3R 15184623 15184664 6 105 2.5 2.0 2.2 1.9 142 chr3R 15184522 intron Gyc88E + chr3R 15184593 intron Gyc88E + chr3R 15184664 intron Gyc88E + chr3R_6_15180001 chr3R_15180001 RAL-822 1972 chr3R 15320368 15320417 chr3R 15320633 15320695 13 273 5.0 3.0 4.0 2.6 327 chr3R 15320368 intergenic CG44040 +,CG6276 -,ear + chr3R 15320532 exon CG44040 + chr3R 15320695 intergenic CG44040 +,ear + chr3R_13_15320001 chr3R_15320001 RAL-822 1973 chr3R 15416246 15416280 chr3R 15416338 15416393 6 100 2.5 6.0 4.2 1.2 147 chr3R 15416246 3` UTR Atx2 + chr3R 15416320 3` UTR Atx2 + chr3R 15416393 3` UTR Atx2 + chr3R_6_15415001 chr3R_15415001 RAL-822 1974 chr3R 15445878 15445904 chr3R 15445998 15446019 8 119 2.0 0.0 1.0 4.0 141 chr3R 15445878 exon AdamTS-A - chr3R 15445948 intron AdamTS-A - chr3R 15446019 intron AdamTS-A - chr3R_8_15445001 chr3R_15445001 RAL-822 1975 chr3R 15594654 15594675 chr3R 15594771 15594771 5 113 0.0 11.0 5.5 0.8 117 chr3R 15594654 intergenic not near genes chr3R 15594712 intergenic not near genes chr3R 15594771 intergenic not near genes chr3R_5_15590001 chr3R_15590001 RAL-822 1976 chr3R 15601146 15601195 chr3R 15608692 15608716 412 12 7538 4.5 8.5 6.5 1.6 7570 chr3R 15601146 intergenic not near genes chr3R 15604931 intergenic not near genes chr3R 15608716 intergenic not near genes chr3R_12_15600001 chr3R_15600001 RAL-822 1977 chr3R 15618744 15618764 chr3R 15626221 15626264 blood 4 7486 1.0 7.5 4.2 0.8 7520 chr3R 15618744 intergenic not near genes chr3R 15622504 intergenic not near genes chr3R 15626264 intergenic not near genes chr3R_4_15620001 chr3R_15620001 RAL-822 1978 chr3R 15636494 15636509 chr3R 15636705 15636705 4 205 4.5 0.0 2.2 1.2 211 chr3R 15636494 intergenic CG43335 + chr3R 15636600 intergenic CG43335 + chr3R 15636705 intergenic CG43335 +,CG43336 + chr3R_4_15635001 chr3R_15635001 RAL-822 1979 chr3R 15646754 15646789 chr3R 15646872 15646907 6 112 3.5 2.5 3.0 1.5 153 chr3R 15646754 intergenic not near genes chr3R 15646830 intergenic not near genes chr3R 15646907 intergenic not near genes chr3R_6_15645001 chr3R_15645001 RAL-822 1980 chr3R 15680606 15680654 chr3R 15681113 15681143 10 506 4.0 5.0 4.5 1.8 537 chr3R 15680606 intron pxb + chr3R 15680874 intron pxb + chr3R 15681143 intron pxb + chr3R_10_15680001 chr3R_15680001 RAL-822 1981 chr3R 15734170 15734211 chr3R 15734261 15734267 4 92 1.5 4.5 3.0 1.0 97 chr3R 15734170 intergenic not near genes chr3R 15734218 intergenic not near genes chr3R 15734267 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-822 1982 chr3R 15735210 15735236 chr3R 15739964 15739991 F-element 12 4754 3.0 7.0 5.0 2.0 4781 chr3R 15735210 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15739991 intergenic not near genes chr3R_12_15735001 chr3R_15735001 RAL-822 1983 chr3R 15760751 15760812 chr3R 15760874 15760905 15 124 4.5 4.0 4.2 2.9 154 chr3R 15760751 intergenic not near genes chr3R 15760828 intergenic not near genes chr3R 15760905 intergenic not near genes chr3R_15_15760001 chr3R_15760001 RAL-822 1984 chr3R 15892623 15892662 chr3R 15892738 15892778 8 114 4.5 4.5 4.5 1.5 155 chr3R 15892623 intron CG14877 - chr3R 15892700 intron CG14877 - chr3R 15892778 intron CG14877 - chr3R_8_15890001 chr3R_15890001 RAL-822 1985 chr3R 15892663 15892680 chr3R 15892732 15892785 4 102 2.5 3.5 3.0 1.0 122 chr3R 15892663 intron CG14877 - chr3R 15892724 intron CG14877 - chr3R 15892785 intron CG14877 - chr3R_4_15890001 chr3R_15890001 RAL-822 1986 chr3R 16024497 16024522 chr3R 16024571 16024581 4 67 2.0 4.0 3.0 1.0 84 chr3R 16024497 intergenic not near genes chr3R 16024539 intergenic not near genes chr3R 16024581 intergenic not near genes chr3R_4_16020001 chr3R_16020001 RAL-822 1987 chr3R 16189385 16189435 chr3R 16189812 16189862 invader4 17 434 3.5 3.5 3.5 3.8 477 chr3R 16189385 intron sra + chr3R 16189624 intron sra + chr3R 16189862 intron sra + chr3R_17_16185001 chr3R_16185001 RAL-822 1988 chr3R 16246489 16246557 chr3R 16246600 16246668 5 107 0.0 3.0 1.5 2.0 179 chr3R 16246489 intron tara + chr3R 16246578 intron tara + chr3R 16246668 intron tara + chr3R_5_16245001 chr3R_16245001 RAL-822 1989 chr3R 16253503 16253568 chr3R 16253621 16253688 6 119 1.0 2.5 1.8 2.1 185 chr3R 16253503 intron tara + chr3R 16253596 intron tara + chr3R 16253688 intron tara + chr3R_6_16250001 chr3R_16250001 RAL-822 1990 chr3R 16374273 16374303 chr3R 16374418 16374425 7 142 4.5 4.5 4.5 1.3 152 chr3R 16374273 intergenic ss - chr3R 16374349 intergenic ss - chr3R 16374425 intergenic ss - chr3R_7_16370001 chr3R_16370001 RAL-822 1991 chr3R 16374309 16374331 chr3R 16374414 16374462 8 135 2.0 3.5 2.8 2.1 153 chr3R 16374309 intergenic ss - chr3R 16374386 intergenic ss - chr3R 16374462 3` UTR ss - chr3R_8_16370001 chr3R_16370001 RAL-822 1992 chr3R 16481003 16481068 chr3R 16481117 16481135 21 104 4.5 3.5 4.0 4.2 132 chr3R 16481003 3` UTR Gyc-89Db + chr3R 16481069 3` UTR Gyc-89Db + chr3R 16481135 intergenic Dhfr +,Gyc-89Db + chr3R_21_16480001 chr3R_16480001 RAL-822 1993 chr3R 16519898 16519931 chr3R 16520026 16520029 9 117 7.0 3.5 5.2 1.5 131 chr3R 16519898 intron CG42342 + chr3R 16519964 intron CG42342 + chr3R 16520029 intron CG42342 + chr3R_9_16515001 chr3R_16515001 RAL-822 1994 chr3R 16732125 16732158 chr3R 16732256 16732284 8 130 0.0 2.5 1.2 3.6 159 chr3R 16732125 intron Ubx - chr3R 16732204 intron Ubx - chr3R 16732284 intron Ubx - chr3R_8_16730001 chr3R_16730001 RAL-822 1995 chr3R 16756294 16756330 chr3R 16762520 16762538 diver 6 6217 2.5 0.5 1.5 2.4 6244 chr3R 16756294 intron bxd - chr3R 16759416 intron bxd - chr3R 16762538 intron bxd - chr3R_6_16755001 chr3R_16755001 RAL-822 1996 chr3R 16771599 16771639 chr3R 16771710 16771750 7 108 2.0 4.5 3.2 1.7 151 chr3R 16771599 intron bxd - chr3R 16771674 intron bxd - chr3R 16771750 intron bxd - chr3R_7_16770001 chr3R_16770001 RAL-822 1997 chr3R 16820218 16820249 chr3R 16820347 16820354 8 122 7.0 6.0 6.5 1.1 136 chr3R 16820218 intron abd-A - chr3R 16820286 intron abd-A - chr3R 16820354 intron abd-A - chr3R_8_16820001 chr3R_16820001 RAL-822 1998 chr3R 16820255 16820277 chr3R 16820353 16820406 10 124 4.5 6.0 5.2 1.6 151 chr3R 16820255 intron abd-A - chr3R 16820330 intron abd-A - chr3R 16820406 intron abd-A - chr3R_10_16820001 chr3R_16820001 RAL-822 1999 chr3R 16848137 16848195 chr3R 16848303 16848340 5 157 4.5 5.0 4.8 0.9 203 chr3R 16848137 intron iab-8 - chr3R 16848238 intron iab-8 - chr3R 16848340 intron iab-8 - chr3R_5_16845001 chr3R_16845001 RAL-822 2000 chr3R 16961175 16961225 chr3R 16961299 16961347 19 120 4.0 2.5 3.2 4.5 172 chr3R 16961175 intron Abd-B - chr3R 16961261 intron Abd-B - chr3R 16961347 intron Abd-B - chr3R_19_16960001 chr3R_16960001 RAL-822 2001 chr3R 17101069 17101093 chr3R 17101182 17101223 5 112 3.0 0.0 1.5 2.0 154 chr3R 17101069 exon cher - chr3R 17101146 intron cher - chr3R 17101223 intron cher - chr3R_5_17100001 chr3R_17100001 RAL-822 2002 chr3R 17121490 17121555 chr3R 17121720 17121783 16 221 6.5 1.5 4.0 3.2 293 chr3R 17121490 intron cher - chr3R 17121636 intron,exon cher -,CG42779 + chr3R 17121783 intron,3` UTR cher -,CG42779 + chr3R_16_17120001 chr3R_17120001 RAL-822 2003 chr3R 17294661 17294666 chr3R 17295098 17295115 BS 4 453 3.5 3.5 3.5 0.9 454 chr3R 17294661 intergenic not near genes chr3R 17294888 intergenic not near genes chr3R 17295115 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-822 2004 chr3R 17294670 17294694 chr3R 17295097 17295140 BS 4 448 1.5 3.5 2.5 1.1 470 chr3R 17294670 intergenic not near genes chr3R 17294905 intergenic not near genes chr3R 17295140 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-822 2005 chr3R 17346663 17346699 chr3R 17348261 17348297 F-element 9 1597 6.0 2.5 4.2 1.7 1634 chr3R 17346663 intron beat-IIa - chr3R 17347480 intron beat-IIa - chr3R 17348297 intron beat-IIa - chr3R_9_17345001 chr3R_17345001 RAL-822 2006 chr3R 17346700 17346712 chr3R 17348257 17348279 F-element 5 1581 5.0 2.5 3.8 1.0 1579 chr3R 17346700 intron beat-IIa - chr3R 17347490 intron beat-IIa - chr3R 17348279 intron beat-IIa - chr3R_5_17345001 chr3R_17345001 RAL-822 2007 chr3R 17355495 17355523 chr3R 17355568 17355635 9 83 4.0 4.0 4.0 1.8 140 chr3R 17355495 intron beat-IIa - chr3R 17355565 intron beat-IIa - chr3R 17355635 intron beat-IIa - chr3R_9_17355001 chr3R_17355001 RAL-822 2008 chr3R 17369658 17369721 chr3R 17369915 17369923 17 237 5.0 4.0 4.5 3.1 265 chr3R 17369658 intergenic not near genes chr3R 17369790 intergenic not near genes chr3R 17369923 intergenic not near genes chr3R_17_17365001 chr3R_17365001 RAL-822 2009 chr3R 17432785 17432841 chr3R 17433000 17433010 8 203 6.5 3.5 5.0 1.3 225 chr3R 17432785 intron CG5873 + chr3R 17432898 intron CG5873 + chr3R 17433010 intron CG5873 + chr3R_8_17430001 chr3R_17430001 RAL-822 2010 chr3R 17461184 17461224 chr3R 17461291 17461341 16 108 3.5 1.5 2.5 4.6 157 chr3R 17461184 intergenic not near genes chr3R 17461262 intergenic not near genes chr3R 17461341 intergenic not near genes chr3R_16_17460001 chr3R_17460001 RAL-822 2011 chr3R 17492571 17492593 chr3R 17492681 17492683 4 108 3.0 5.5 4.2 0.8 112 chr3R 17492571 exon Dscam3 - chr3R 17492627 intron Dscam3 - chr3R 17492683 intron Dscam3 - chr3R_4_17490001 chr3R_17490001 RAL-822 2012 chr3R 17497933 17497940 chr3R 17498053 17498061 4 121 7.0 8.5 7.8 0.5 128 chr3R 17497933 intron Dscam3 - chr3R 17497997 intron Dscam3 - chr3R 17498061 intron Dscam3 - chr3R_4_17495001 chr3R_17495001 RAL-822 2013 chr3R 17497942 17497984 chr3R 17498051 17498105 10 118 4.0 8.5 6.2 1.4 163 chr3R 17497942 intron Dscam3 - chr3R 17498024 intron Dscam3 - chr3R 17498105 intron Dscam3 - chr3R_10_17495001 chr3R_17495001 RAL-822 2014 chr3R 17504803 17504845 chr3R 17504980 17505003 6 172 2.5 4.5 3.5 1.3 200 chr3R 17504803 intron Dscam3 - chr3R 17504903 intron Dscam3 - chr3R 17505003 intron Dscam3 - chr3R_6_17500001 chr3R_17500001 RAL-822 2015 chr3R 17517594 17517646 chr3R 17517763 17517782 9 159 4.0 0.0 2.0 3.0 188 chr3R 17517594 intergenic not near genes chr3R 17517688 intergenic not near genes chr3R 17517782 intergenic CR44349 - chr3R_9_17515001 chr3R_17515001 RAL-822 2016 chr3R 17521579 17521586 chr3R 17521722 17521779 4 173 1.0 3.0 2.0 1.3 200 chr3R 17521579 intergenic not near genes chr3R 17521679 intergenic not near genes chr3R 17521779 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-822 2017 chr3R 17522042 17522243 chr3R 17522117 17522317 5 93 3.5 4.0 3.8 1.0 275 chr3R 17522042 intergenic not near genes chr3R 17522180 intergenic not near genes chr3R 17522317 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-822 2018 chr3R 17593039 17593057 chr3R 17593135 17593168 5 105 5.0 8.5 6.8 0.6 129 chr3R 17593039 intergenic not near genes chr3R 17593104 intergenic not near genes chr3R 17593168 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-822 2019 chr3R 17624939 17624964 chr3R 17625050 17625075 9 110 4.0 4.0 4.0 1.8 136 chr3R 17624939 intergenic AttD + chr3R 17625007 intergenic AttD + chr3R 17625075 intergenic AttD + chr3R_9_17625001 chr3R_17625001 RAL-822 2020 chr3R 17638305 17638338 chr3R 17638805 17638859 roo 8 511 0.0 8.5 4.2 1.5 554 chr3R 17638305 intron CG43175 + chr3R 17638582 intron CG43175 + chr3R 17638859 intron,intron CG43175 +,CR45222 + chr3R_8_17635001 chr3R_17635001 RAL-822 2021 chr3R 17739178 17739211 chr3R 17739263 17739274 4 82 8.0 1.5 4.8 0.7 96 chr3R 17739178 intron TyrRII + chr3R 17739226 intron TyrRII + chr3R 17739274 intron TyrRII + chr3R_4_17735001 chr3R_17735001 RAL-822 2022 chr3R 17823178 17823217 chr3R 17823293 17823322 9 115 8.5 7.0 7.8 1.0 144 chr3R 17823178 intron tinc + chr3R 17823250 intron tinc + chr3R 17823322 intron tinc + chr3R_9_17820001 chr3R_17820001 RAL-822 2023 chr3R 17859451 17859469 chr3R 17859542 17859557 7 103 1.0 6.0 3.5 1.6 106 chr3R 17859451 intron tinc + chr3R 17859504 intron tinc + chr3R 17859557 intron tinc + chr3R_7_17855001 chr3R_17855001 RAL-822 2024 chr3R 17913089 17913136 chr3R 17913219 17913266 16 122 7.0 3.5 5.2 2.6 177 chr3R 17913089 intron Rim - chr3R 17913178 intron Rim - chr3R 17913266 intron Rim - chr3R_16_17910001 chr3R_17910001 RAL-822 2025 chr3R 17915533 17915593 chr3R 17915721 17915773 15 186 4.5 4.5 4.5 2.7 240 chr3R 17915533 intron Rim - chr3R 17915653 intron Rim - chr3R 17915773 intron Rim - chr3R_15_17915001 chr3R_17915001 RAL-822 2026 chr3R 17976518 17976532 chr3R 17976630 17976644 5 111 0.0 5.0 2.5 1.4 126 chr3R 17976518 intron cpo + chr3R 17976581 intron cpo + chr3R 17976644 intron cpo + chr3R_5_17975001 chr3R_17975001 RAL-822 2027 chr3R 18041742 18041770 chr3R 18041844 18041862 5 99 1.0 2.0 1.5 2.0 120 chr3R 18041742 intergenic not near genes chr3R 18041802 intergenic not near genes chr3R 18041862 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-822 2028 chr3R 18061562 18061599 chr3R 18063160 18063202 F-element 16 1598 6.5 4.5 5.5 2.5 1640 chr3R 18061562 intergenic not near genes chr3R 18062382 intergenic not near genes chr3R 18063202 intergenic not near genes chr3R_16_18060001 chr3R_18060001 RAL-822 2029 chr3R 18061601 18061608 chr3R 18063154 18063196 F-element 4 1580 5.0 4.0 4.5 0.7 1595 chr3R 18061601 intergenic not near genes chr3R 18062398 intergenic not near genes chr3R 18063196 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-822 2030 chr3R 18065626 18065663 chr3R 18065746 18065788 4 131 0.0 3.5 1.8 1.4 162 chr3R 18065626 intergenic not near genes chr3R 18065707 intergenic not near genes chr3R 18065788 intergenic not near genes chr3R_4_18065001 chr3R_18065001 RAL-822 2031 chr3R 18067946 18068014 chr3R 18068076 18068130 8 122 0.0 7.0 3.5 1.8 184 chr3R 18067946 intergenic not near genes chr3R 18068038 intergenic not near genes chr3R 18068130 intergenic not near genes chr3R_8_18065001 chr3R_18065001 RAL-822 2032 chr3R 18078121 18078157 chr3R 18078235 18078257 5 111 10.5 0.0 5.2 0.8 136 chr3R 18078121 intergenic not near genes chr3R 18078189 intergenic not near genes chr3R 18078257 intergenic not near genes chr3R_5_18075001 chr3R_18075001 RAL-822 2033 chr3R 18122901 18122917 chr3R 18123013 18123018 7 110 3.0 8.5 5.8 1.0 117 chr3R 18122901 intron sr + chr3R 18122960 intron sr + chr3R 18123018 intron sr + chr3R_7_18120001 chr3R_18120001 RAL-822 2034 chr3R 18143466 18143510 chr3R 18143588 18143633 10 121 6.5 0.5 3.5 2.2 167 chr3R 18143466 intergenic not near genes chr3R 18143550 intergenic not near genes chr3R 18143633 intergenic not near genes chr3R_10_18140001 chr3R_18140001 RAL-822 2035 chr3R 18322804 18322827 chr3R 18323455 18323470 5 647 25.5 23.0 24.2 0.2 666 chr3R 18322804 intron CG31235 - chr3R 18323137 intron CG31235 - chr3R 18323470 intron CG31235 - chr3R_5_18320001 chr3R_18320001 RAL-822 2036 chr3R 18472250 18472276 chr3R 18472386 18472407 5 135 9.5 2.5 6.0 0.7 157 chr3R 18472250 intron fru - chr3R 18472328 intron fru - chr3R 18472407 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-822 2037 chr3R 18485295 18485351 chr3R 18485430 18485485 12 131 1.0 4.0 2.5 3.4 190 chr3R 18485295 intron fru - chr3R 18485390 intron fru - chr3R 18485485 intron fru - chr3R_12_18485001 chr3R_18485001 RAL-822 2038 chr3R 18498159 18498188 chr3R 18498270 18498299 4 110 0.5 2.5 1.5 1.6 140 chr3R 18498159 intron fru - chr3R 18498229 intron fru - chr3R 18498299 intron fru - chr3R_4_18495001 chr3R_18495001 RAL-822 2039 chr3R 18541523 18541547 chr3R 18541621 18541658 9 106 3.0 8.0 5.5 1.4 135 chr3R 18541523 intron fru - chr3R 18541590 intron fru - chr3R 18541658 intron fru - chr3R_9_18540001 chr3R_18540001 RAL-822 2040 chr3R 18606489 18606523 chr3R 18610737 18610790 F-element 15 4259 3.0 7.5 5.2 2.4 4301 chr3R 18606489 intron,intron qin +,CG14304 - chr3R 18608640 intron,intron qin +,CG14304 - chr3R 18610790 intron,intron qin +,CG14304 - chr3R_15_18605001 chr3R_18605001 RAL-822 2041 chr3R 18617689 18617738 chr3R 18617804 18617828 13 109 3.5 7.5 5.5 2.0 139 chr3R 18617689 intron,intron qin +,CG14304 - chr3R 18617758 intron,intron qin +,CG14304 - chr3R 18617828 intron,intron qin +,CG14304 - chr3R_13_18615001 chr3R_18615001 RAL-822 2042 chr3R 18670352 18670412 chr3R 18670480 18670540 10 123 1.5 5.0 3.2 2.4 188 chr3R 18670352 intron CG7702 + chr3R 18670446 intron CG7702 + chr3R 18670540 intron CG7702 + chr3R_10_18670001 chr3R_18670001 RAL-822 2043 chr3R 18716869 18716922 chr3R 18717054 18717107 24 182 7.5 6.0 6.8 3.1 238 chr3R 18716869 intron,3` UTR Cha +,VAChT + chr3R 18716988 intron,3` UTR Cha +,VAChT + chr3R 18717107 intron,3` UTR Cha +,VAChT + chr3R_24_18715001 chr3R_18715001 RAL-822 2044 chr3R 18718042 18718056 chr3R 18718156 18718160 6 112 13.5 12.5 13.0 0.4 118 chr3R 18718042 intron,3` UTR Cha +,VAChT + chr3R 18718101 intron,3` UTR Cha +,VAChT + chr3R 18718160 intron,3` UTR Cha +,VAChT + chr3R_6_18715001 chr3R_18715001 RAL-822 2045 chr3R 18766752 18766799 chr3R 18766858 18766899 11 100 6.0 1.5 3.8 2.3 147 chr3R 18766752 intron CG7720 - chr3R 18766826 intron CG7720 - chr3R 18766899 intron CG7720 - chr3R_11_18765001 chr3R_18765001 RAL-822 2046 chr3R 18770265 18770322 chr3R 18770377 18770434 23 112 6.0 6.0 6.0 3.3 169 chr3R 18770265 intron CG7720 - chr3R 18770350 intron CG7720 - chr3R 18770434 intron CG7720 - chr3R_23_18770001 chr3R_18770001 RAL-822 2047 chr3R 18784892 18784930 chr3R 18785021 18785059 5 127 3.0 4.0 3.5 1.1 167 chr3R 18784892 intron CG7720 - chr3R 18784976 intron CG7720 - chr3R 18785059 intron CG7720 - chr3R_5_18780001 chr3R_18780001 RAL-822 2048 chr3R 18792772 18792824 chr3R 18792890 18792932 8 116 7.5 0.0 3.8 1.7 160 chr3R 18792772 intron CG7720 - chr3R 18792852 intron CG7720 - chr3R 18792932 intron CG7720 - chr3R_8_18790001 chr3R_18790001 RAL-822 2049 chr3R 18807300 18807327 chr3R 18807407 18807410 11 105 1.0 0.0 0.5 7.3 110 chr3R 18807300 intron CG18208 - chr3R 18807355 intron CG18208 - chr3R 18807410 intron CG18208 - chr3R_11_18805001 chr3R_18805001 RAL-822 2050 chr3R 18812060 18812108 chr3R 18812153 18812204 11 101 6.0 6.0 6.0 1.6 144 chr3R 18812060 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812204 intron CG18208 - chr3R_11_18810001 chr3R_18810001 RAL-822 2051 chr3R 18817481 18817540 chr3R 18817607 18817658 12 127 0.5 0.0 0.2 10.0 177 chr3R 18817481 intron CG18208 - chr3R 18817570 intron CG18208 - chr3R 18817658 intron CG18208 - chr3R_12_18815001 chr3R_18815001 RAL-822 2052 chr3R 18827847 18827914 chr3R 18827964 18828001 11 101 0.5 2.0 1.2 5.0 154 chr3R 18827847 intron CG18208 - chr3R 18827924 intron CG18208 - chr3R 18828001 intron CG18208 - chr3R_11_18825001 chr3R_18825001 RAL-822 2053 chr3R 18870806 18870851 chr3R 18870913 18870937 6 107 7.5 3.5 5.5 0.9 131 chr3R 18870806 intergenic not near genes chr3R 18870872 intergenic not near genes chr3R 18870937 intergenic not near genes chr3R_6_18870001 chr3R_18870001 RAL-822 2054 chr3R 18879888 18879926 chr3R 18879999 18880027 4 100 0.0 1.0 0.5 2.7 139 chr3R 18879888 intergenic not near genes chr3R 18879958 intergenic not near genes chr3R 18880027 intergenic not near genes chr3R_4_18875001 chr3R_18875001 RAL-822 2055 chr3R 18888080 18888091 chr3R 18888199 18888200 4 117 12.5 1.5 7.0 0.5 120 chr3R 18888080 intergenic not near genes chr3R 18888140 intergenic not near genes chr3R 18888200 intergenic not near genes chr3R_4_18885001 chr3R_18885001 RAL-822 2056 chr3R 18897575 18897607 chr3R 18897686 18897714 4 109 2.5 2.0 2.2 1.2 139 chr3R 18897575 intergenic not near genes chr3R 18897644 intergenic CG14297 + chr3R 18897714 intergenic CG14297 + chr3R_4_18895001 chr3R_18895001 RAL-822 2057 chr3R 19139754 19139803 chr3R 19139874 19139930 13 124 6.0 3.0 4.5 2.4 176 chr3R 19139754 3` UTR Ppcs - chr3R 19139842 3` UTR Ppcs - chr3R 19139930 3` UTR Ppcs - chr3R_13_19135001 chr3R_19135001 RAL-822 2058 chr3R 19222858 19222878 chr3R 19223218 19223243 5 366 4.0 3.0 3.5 1.1 385 chr3R 19222858 intron vib - chr3R 19223050 intron vib - chr3R 19223243 intron vib - chr3R_5_19220001 chr3R_19220001 RAL-822 2059 chr3R 19276906 19276936 chr3R 19277011 19277031 7 110 3.5 0.0 1.8 2.5 125 chr3R 19276906 intergenic not near genes chr3R 19276968 intergenic not near genes chr3R 19277031 intergenic not near genes chr3R_7_19275001 chr3R_19275001 RAL-822 2060 chr3R 19344630 19344696 chr3R 19344800 19344866 15 169 2.5 4.5 3.5 3.3 236 chr3R 19344630 intergenic not near genes chr3R 19344748 intergenic not near genes chr3R 19344866 intergenic not near genes chr3R_15_19340001 chr3R_19340001 RAL-822 2061 chr3R 19389275 19389332 chr3R 19389444 19389489 15 172 6.0 4.5 5.2 2.4 214 chr3R 19389275 intron,exon Ino80 -,CG3734 + chr3R 19389382 intron,exon Ino80 -,CG3734 + chr3R 19389489 intron,exon Ino80 -,CG3734 + chr3R_15_19385001 chr3R_19385001 RAL-822 2062 chr3R 19417535 19417556 chr3R 19417658 19417689 5 125 0.0 7.5 3.8 1.0 154 chr3R 19417535 intron CG31221 + chr3R 19417612 intron CG31221 + chr3R 19417689 intron CG31221 + chr3R_5_19415001 chr3R_19415001 RAL-822 2063 chr3R 19431495 19431496 chr3R 19431609 19431615 4 118 3.0 4.0 3.5 0.9 120 chr3R 19431495 intron CG31221 + chr3R 19431555 intron CG31221 + chr3R 19431615 intron CG31221 + chr3R_4_19430001 chr3R_19430001 RAL-822 2064 chr3R 19494396 19494408 chr3R 19494494 19494523 8 112 5.5 10.0 7.8 0.9 127 chr3R 19494396 intron Dys + chr3R 19494460 intron Dys + chr3R 19494523 intron Dys + chr3R_8_19490001 chr3R_19490001 RAL-822 2065 chr3R 19581607 19581638 chr3R 19581722 19581731 4 106 8.5 0.5 4.5 0.7 124 chr3R 19581607 intron Dys + chr3R 19581669 intron Dys + chr3R 19581731 intron Dys + chr3R_4_19580001 chr3R_19580001 RAL-822 2066 chr3R 19602549 19602598 chr3R 19602650 19602697 19 110 3.5 2.5 3.0 4.8 148 chr3R 19602549 exon CG7333 + chr3R 19602623 3` UTR CG7333 + chr3R 19602697 intergenic CG7333 + chr3R_19_19600001 chr3R_19600001 RAL-822 2067 chr3R 19681577 19681584 chr3R 19681698 19681710 4 122 8.0 4.0 6.0 0.6 133 chr3R 19681577 intron Naam + chr3R 19681644 intron Naam + chr3R 19681710 intron Naam + chr3R_4_19680001 chr3R_19680001 RAL-822 2068 chr3R 19681586 19681629 chr3R 19681696 19681723 13 119 3.0 4.0 3.5 2.9 137 chr3R 19681586 intron Naam + chr3R 19681654 intron Naam + chr3R 19681723 intron Naam + chr3R_13_19680001 chr3R_19680001 RAL-822 2069 chr3R 19683225 19683270 chr3R 19683413 19683458 8 184 3.0 1.5 2.2 2.5 233 chr3R 19683225 intron Naam + chr3R 19683342 intron Naam + chr3R 19683458 intron Naam + chr3R_8_19680001 chr3R_19680001 RAL-822 2070 chr3R 19702317 19702354 chr3R 19702417 19702459 6 102 6.5 4.0 5.2 1.0 142 chr3R 19702317 intergenic not near genes chr3R 19702388 intergenic not near genes chr3R 19702459 intergenic not near genes chr3R_6_19700001 chr3R_19700001 RAL-822 2071 chr3R 19716207 19716230 chr3R 19716302 19716328 5 99 2.0 0.0 1.0 2.5 121 chr3R 19716207 intergenic CG34286 - chr3R 19716268 intergenic CG34286 - chr3R 19716328 intergenic CG34286 - chr3R_5_19715001 chr3R_19715001 RAL-822 2072 chr3R 19750009 19750066 chr3R 19750124 19750181 5 112 2.5 5.0 3.8 1.0 172 chr3R 19750009 intron GluClalpha + chr3R 19750095 intron GluClalpha + chr3R 19750181 intron GluClalpha + chr3R_5_19750001 chr3R_19750001 RAL-822 2073 chr3R 19783149 19783206 chr3R 19783272 19783327 9 118 6.0 1.5 3.8 1.9 178 chr3R 19783149 intergenic CG11407 +,CG11453 + chr3R 19783238 intergenic CG11407 +,CG11453 + chr3R 19783327 intergenic CG11407 +,CG11453 + chr3R_9_19780001 chr3R_19780001 RAL-822 2074 chr3R 19793876 19793928 chr3R 19793993 19794056 10 122 1.5 10.5 6.0 1.4 180 chr3R 19793876 intergenic bnl - chr3R 19793966 intergenic bnl - chr3R 19794056 intergenic bnl - chr3R_10_19790001 chr3R_19790001 RAL-822 2075 chr3R 19827490 19827558 chr3R 19827611 19827669 15 116 4.0 3.0 3.5 3.3 179 chr3R 19827490 intron bnl - chr3R 19827580 intron bnl - chr3R 19827669 exon bnl - chr3R_15_19825001 chr3R_19825001 RAL-822 2076 chr3R 20109505 20109566 chr3R 20114746 20114802 copia 10 5234 4.0 4.5 4.2 1.9 5297 chr3R 20109505 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114802 intergenic CG10887 + chr3R_10_20110001 chr3R_20110001 RAL-822 2077 chr3R 20124531 20124600 chr3R 20124653 20124710 21 111 2.0 2.5 2.2 6.6 179 chr3R 20124531 intergenic not near genes chr3R 20124620 intergenic not near genes chr3R 20124710 intergenic not near genes chr3R_21_20120001 chr3R_20120001 RAL-822 2078 chr3R 20156672 20156701 chr3R 20165877 20165892 roo 4 9199 4.5 6.5 5.5 0.6 9220 chr3R 20156672 intergenic not near genes chr3R 20161282 intergenic not near genes chr3R 20165892 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-822 2079 chr3R 20156706 20156718 chr3R 20165865 20165913 roo 9 9190 2.5 4.5 3.5 2.0 9207 chr3R 20156706 intergenic not near genes chr3R 20161310 intergenic not near genes chr3R 20165913 intergenic not near genes chr3R_9_20160001 chr3R_20160001 RAL-822 2080 chr3R 20180678 20180715 chr3R 20180798 20180805 5 111 5.5 8.0 6.8 0.6 127 chr3R 20180678 intergenic not near genes chr3R 20180742 intergenic not near genes chr3R 20180805 intergenic not near genes chr3R_5_20180001 chr3R_20180001 RAL-822 2081 chr3R 20184591 20184600 chr3R 20184684 20184703 5 101 1.5 8.0 4.8 0.9 112 chr3R 20184591 intergenic not near genes chr3R 20184647 intergenic not near genes chr3R 20184703 intergenic not near genes chr3R_5_20180001 chr3R_20180001 RAL-822 2082 chr3R 20195224 20195256 chr3R 20195320 20195330 4 83 2.5 2.0 2.2 1.2 106 chr3R 20195224 intergenic not near genes chr3R 20195277 intergenic not near genes chr3R 20195330 intergenic not near genes chr3R_4_20195001 chr3R_20195001 RAL-822 2083 chr3R 20197090 20197149 chr3R 20197197 20197224 9 100 2.0 1.5 1.8 3.2 134 chr3R 20197090 intergenic not near genes chr3R 20197157 intergenic not near genes chr3R 20197224 intergenic not near genes chr3R_9_20195001 chr3R_20195001 RAL-822 2084 chr3R 20205531 20205594 chr3R 20205688 20205740 15 156 3.0 3.0 3.0 3.8 209 chr3R 20205531 intron Nlg4 + chr3R 20205636 intron Nlg4 + chr3R 20205740 intron Nlg4 + chr3R_15_20205001 chr3R_20205001 RAL-822 2085 chr3R 20245266 20245301 chr3R 20248905 20248935 F-element 7 3638 10.0 0.5 5.2 1.1 3669 chr3R 20245266 3` UTR Nlg4 + chr3R 20247100 intergenic not near genes chr3R 20248935 intergenic not near genes chr3R_7_20245001 chr3R_20245001 RAL-822 2086 chr3R 20266502 20266535 chr3R 20272986 20273041 Burdock 5 6501 1.0 6.5 3.8 1.0 6539 chr3R 20266502 intron cic + chr3R 20269772 intron cic + chr3R 20273041 intron cic + chr3R_5_20265001 chr3R_20265001 RAL-822 2087 chr3R 20282255 20282297 chr3R 20282366 20282408 6 106 3.5 7.0 5.2 1.0 153 chr3R 20282255 intron cic + chr3R 20282332 intron cic + chr3R 20282408 intron cic + chr3R_6_20280001 chr3R_20280001 RAL-822 2088 chr3R 20308170 20308219 chr3R 20308278 20308352 11 127 2.5 0.0 1.2 5.0 182 chr3R 20308170 intergenic not near genes chr3R 20308261 intergenic not near genes chr3R 20308352 intergenic not near genes chr3R_11_20305001 chr3R_20305001 RAL-822 2089 chr3R 20330973 20331026 chr3R 20331494 20331538 roo 13 517 5.5 10.5 8.0 1.4 565 chr3R 20330973 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331538 intergenic not near genes chr3R_13_20330001 chr3R_20330001 RAL-822 2090 chr3R 20450125 20450144 chr3R 20450243 20450264 6 118 0.0 2.0 1.0 3.0 139 chr3R 20450125 intron Gfrl - chr3R 20450194 intron Gfrl - chr3R 20450264 intron Gfrl - chr3R_6_20450001 chr3R_20450001 RAL-822 2091 chr3R 20465582 20465640 chr3R 20465719 20465749 22 133 4.5 6.5 5.5 3.4 167 chr3R 20465582 intron Gfrl - chr3R 20465666 intron Gfrl - chr3R 20465749 intron Gfrl - chr3R_22_20465001 chr3R_20465001 RAL-822 2092 chr3R 20469251 20469437 chr3R 20469383 20469543 6 120 3.0 3.0 3.0 1.5 292 chr3R 20469251 intron Gfrl - chr3R 20469397 intron Gfrl - chr3R 20469543 intron Gfrl - chr3R_6_20465001 chr3R_20465001 RAL-822 2093 chr3R 20472722 20472749 chr3R 20472807 20472821 6 85 0.5 2.5 1.5 2.4 99 chr3R 20472722 intron Gfrl - chr3R 20472772 intron Gfrl - chr3R 20472821 intron Gfrl - chr3R_6_20470001 chr3R_20470001 RAL-822 2094 chr3R 20498483 20498545 chr3R 20498611 20498673 9 126 4.0 1.5 2.8 2.4 190 chr3R 20498483 intergenic not near genes chr3R 20498578 intergenic not near genes chr3R 20498673 intergenic not near genes chr3R_9_20495001 chr3R_20495001 RAL-822 2095 chr3R 20499843 20499899 chr3R 20499963 20500024 13 123 2.0 6.0 4.0 2.6 181 chr3R 20499843 intergenic Dic2 - chr3R 20499934 intergenic Dic2 - chr3R 20500024 3` UTR Dic2 - chr3R_13_20495001 chr3R_20495001 RAL-822 2096 chr3R 20506575 20506613 chr3R 20507388 20507431 BS 10 821 8.0 2.0 5.0 1.7 856 chr3R 20506575 intergenic Or92a + chr3R 20507003 intergenic CG4288 - chr3R 20507431 3` UTR CG4288 - chr3R_10_20505001 chr3R_20505001 RAL-822 2097 chr3R 20512982 20513035 chr3R 20515712 20515773 opus 6 2734 2.0 0.0 1.0 3.0 2791 chr3R 20512982 intergenic not near genes chr3R 20514378 intergenic not near genes chr3R 20515773 intergenic not near genes chr3R_6_20510001 chr3R_20510001 RAL-822 2098 chr3R 20529042 20529053 chr3R 20529194 20529197 4 153 1.0 4.5 2.8 1.1 155 chr3R 20529042 intergenic not near genes chr3R 20529120 intergenic not near genes chr3R 20529197 intergenic not near genes chr3R_4_20525001 chr3R_20525001 RAL-822 2099 chr3R 20592748 20592812 chr3R 20592879 20592942 9 128 1.0 7.5 4.2 1.7 194 chr3R 20592748 intergenic CG4159 -,bon + chr3R 20592845 intergenic CG4159 -,bon + chr3R 20592942 intergenic bon +,CG4159 - chr3R_9_20590001 chr3R_20590001 RAL-822 2100 chr3R 20703460 20703514 chr3R 20703882 20703888 8 412 3.0 7.0 5.0 1.3 428 chr3R 20703460 intron Oamb - chr3R 20703674 intron Oamb - chr3R 20703888 intron Oamb - chr3R_8_20700001 chr3R_20700001 RAL-822 2101 chr3R 20771706 20771728 chr3R 20771800 20771800 4 87 0.0 4.5 2.2 1.2 94 chr3R 20771706 intron,intron Syp +,Takl1 - chr3R 20771753 intron,intron Syp +,Takl1 - chr3R 20771800 intron,exon Syp +,Takl1 - chr3R_4_20770001 chr3R_20770001 RAL-822 2102 chr3R 20787429 20787452 chr3R 20787534 20787566 5 108 3.5 4.0 3.8 1.0 137 chr3R 20787429 intron Syp + chr3R 20787498 intron Syp + chr3R 20787566 intron Syp + chr3R_5_20785001 chr3R_20785001 RAL-822 2103 chr3R 20850053 20850058 chr3R 20850173 20850178 5 120 0.5 3.0 1.8 1.8 125 chr3R 20850053 intergenic RpS30 + chr3R 20850116 intergenic RpS30 + chr3R 20850178 intergenic RpS30 + chr3R_5_20850001 chr3R_20850001 RAL-822 2104 chr3R 20850067 20850104 chr3R 20850172 20850224 7 110 0.5 3.0 1.8 2.5 157 chr3R 20850067 intergenic RpS30 + chr3R 20850146 intergenic RpS30 + chr3R 20850224 intergenic RpS30 + chr3R_7_20850001 chr3R_20850001 RAL-822 2105 chr3R 20870253 20870284 chr3R 20870338 20870404 9 96 1.5 2.5 2.0 3.0 151 chr3R 20870253 intergenic not near genes chr3R 20870328 intergenic not near genes chr3R 20870404 intergenic not near genes chr3R_9_20870001 chr3R_20870001 RAL-822 2106 chr3R 20899895 20899936 chr3R 20900021 20900067 8 124 0.0 2.0 1.0 4.0 172 chr3R 20899895 intergenic not near genes chr3R 20899981 intergenic not near genes chr3R 20900067 intergenic not near genes chr3R_8_20895001 chr3R_20895001 RAL-822 2107 chr3R 20936068 20936105 chr3R 20936165 20936217 7 107 4.0 2.0 3.0 1.8 149 chr3R 20936068 intron CG31191 - chr3R 20936142 intron CG31191 - chr3R 20936217 intron CG31191 - chr3R_7_20935001 chr3R_20935001 RAL-822 2108 chr3R 20979463 20979517 chr3R 20979563 20979618 8 104 2.0 1.0 1.5 3.2 155 chr3R 20979463 intron Calx + chr3R 20979540 intron Calx + chr3R 20979618 intron Calx + chr3R_8_20975001 chr3R_20975001 RAL-822 2109 chr3R 20990708 20990748 chr3R 20990802 20990859 10 106 3.5 3.5 3.5 2.2 151 chr3R 20990708 intron Calx + chr3R 20990784 intron Calx + chr3R 20990859 intron Calx + chr3R_10_20990001 chr3R_20990001 RAL-822 2110 chr3R 21020386 21020432 chr3R 21020476 21020543 13 98 8.0 3.0 5.5 2.0 157 chr3R 21020386 3` UTR Rlip + chr3R 21020464 3` UTR Rlip + chr3R 21020543 3` UTR Rlip + chr3R_13_21020001 chr3R_21020001 RAL-822 2111 chr3R 21041090 21041123 chr3R 21041253 21041304 9 176 2.0 7.0 4.5 1.6 214 chr3R 21041090 exon Dhc93AB - chr3R 21041197 intron Dhc93AB - chr3R 21041304 intron Dhc93AB - chr3R_9_21040001 chr3R_21040001 RAL-822 2112 chr3R 21118924 21118932 chr3R 21119065 21119068 INE-1 4 140 14.5 7.5 11.0 0.3 144 chr3R 21118924 intergenic Bdbt -,slmb - chr3R 21118996 intergenic Bdbt -,slmb - chr3R 21119068 intergenic slmb -,Bdbt - chr3R_4_21115001 chr3R_21115001 RAL-822 2113 chr3R 21129787 21130016 chr3R 21129911 21130121 16 102 1.0 0.0 0.5 10.7 334 chr3R 21129787 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129954 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130121 intergenic Ice2 +,Obp93a - chr3R_16_21125001 chr3R_21125001 RAL-822 2114 chr3R 21154544 21154582 chr3R 21154758 21154822 11 241 4.0 0.0 2.0 3.7 278 chr3R 21154544 intron SNF4Agamma + chr3R 21154683 intron SNF4Agamma + chr3R 21154822 intron SNF4Agamma + chr3R_11_21150001 chr3R_21150001 RAL-822 2115 chr3R 21240420 21240476 chr3R 21240547 21240603 14 122 2.0 6.0 4.0 2.8 183 chr3R 21240420 intergenic not near genes chr3R 21240512 intergenic not near genes chr3R 21240603 intergenic not near genes chr3R_14_21240001 chr3R_21240001 RAL-822 2116 chr3R 21310928 21311010 chr3R 21314445 21314551 6 3536 16.5 0.0 8.2 0.7 3623 chr3R 21310928 5` UTR Hsromega + chr3R 21312740 5` UTR Hsromega + chr3R 21314551 5` UTR Hsromega + chr3R_6_21310001 chr3R_21310001 RAL-822 2117 chr3R 21321465 21321531 chr3R 21321596 21321652 14 129 0.0 3.5 1.8 5.0 187 chr3R 21321465 intron CG16791 - chr3R 21321558 intron CG16791 - chr3R 21321652 intron CG16791 - chr3R_14_21320001 chr3R_21320001 RAL-822 2118 chr3R 21330852 21330893 chr3R 21330960 21330994 11 101 6.5 0.5 3.5 2.4 142 chr3R 21330852 intron CG16791 - chr3R 21330923 intron CG16791 - chr3R 21330994 intron CG16791 - chr3R_11_21330001 chr3R_21330001 RAL-822 2119 chr3R 21393469 21393480 chr3R 21393614 21393625 5 144 2.0 2.5 2.2 1.6 156 chr3R 21393469 intergenic not near genes chr3R 21393547 intergenic not near genes chr3R 21393625 intergenic not near genes chr3R_5_21390001 chr3R_21390001 RAL-822 2120 chr3R 21464374 21464378 chr3R 21464495 21464499 4 121 14.0 1.0 7.5 0.5 125 chr3R 21464374 intergenic not near genes chr3R 21464436 intergenic not near genes chr3R 21464499 intergenic not near genes chr3R_4_21460001 chr3R_21460001 RAL-822 2121 chr3R 21464382 21464429 chr3R 21464488 21464533 7 113 5.0 0.5 2.8 1.8 151 chr3R 21464382 intergenic not near genes chr3R 21464458 intergenic not near genes chr3R 21464533 intergenic not near genes chr3R_7_21460001 chr3R_21460001 RAL-822 2122 chr3R 21506850 21506910 chr3R 21506971 21507025 17 117 3.0 3.5 3.2 4.0 175 chr3R 21506850 intron C15 + chr3R 21506938 intron C15 + chr3R 21507025 intron C15 + chr3R_17_21505001 chr3R_21505001 RAL-822 2123 chr3R 21545590 21545622 chr3R 21545692 21545705 5 93 4.5 6.0 5.2 0.8 115 chr3R 21545590 intergenic not near genes chr3R 21545648 intergenic not near genes chr3R 21545705 intergenic not near genes chr3R_5_21545001 chr3R_21545001 RAL-822 2124 chr3R 21582981 21583018 chr3R 21583100 21583126 5 120 4.0 6.0 5.0 0.8 145 chr3R 21582981 intron InR - chr3R 21583054 intron InR - chr3R 21583126 intron InR - chr3R_5_21580001 chr3R_21580001 RAL-822 2125 chr3R 21586437 21586445 chr3R 21586505 21586548 6 89 4.0 6.0 5.0 1.0 111 chr3R 21586437 intron InR - chr3R 21586492 intron InR - chr3R 21586548 intron InR - chr3R_6_21585001 chr3R_21585001 RAL-822 2126 chr3R 21600252 21600277 chr3R 21600350 21600389 13 101 1.0 5.0 3.0 3.2 137 chr3R 21600252 intron InR - chr3R 21600320 intron InR - chr3R 21600389 intron InR - chr3R_13_21600001 chr3R_21600001 RAL-822 2127 chr3R 21725652 21725692 chr3R 21725823 21725846 11 166 0.0 3.0 1.5 4.4 194 chr3R 21725652 intergenic not near genes chr3R 21725749 intergenic not near genes chr3R 21725846 intergenic not near genes chr3R_11_21725001 chr3R_21725001 RAL-822 2128 chr3R 21731814 21731821 chr3R 21731956 21731963 5 142 4.5 1.0 2.8 1.3 149 chr3R 21731814 intergenic not near genes chr3R 21731888 intergenic not near genes chr3R 21731963 intergenic not near genes chr3R_5_21730001 chr3R_21730001 RAL-822 2129 chr3R 21761115 21761140 chr3R 21768522 21768542 mdg1 6 7412 4.0 3.5 3.8 1.2 7427 chr3R 21761115 exon CG42335 + chr3R 21764828 intron CG42335 + chr3R 21768542 exon CG42335 + chr3R_6_21760001 chr3R_21760001 RAL-822 2130 chr3R 21785961 21785995 chr3R 21786063 21786100 5 109 4.0 4.0 4.0 1.0 139 chr3R 21785961 3` UTR,3` UTR CASK -,CRG - chr3R 21786030 3` UTR,3` UTR CASK -,CRG - chr3R 21786100 3` UTR,3` UTR CASK -,CRG - chr3R_5_21785001 chr3R_21785001 RAL-822 2131 chr3R 21903509 21903633 chr3R 21903624 21903765 8 123 0.0 0.0 0.0 8.0 256 chr3R 21903509 intron CG6678 + chr3R 21903637 intron CG6678 + chr3R 21903765 intron CG6678 + chr3R_8_21900001 chr3R_21900001 RAL-822 2132 chr3R 21907534 21907534 chr3R 28831801 28831802 7 6924268 15.0 7.5 11.2 0.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_7_25365001 chr3R_25365001 RAL-822 2133 chr3R 17389054 17389054 chr3R 21907535 21907535 4 4518481 3.0 15.5 9.2 0.4 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-822 2134 chr3R 21907535 21907535 chr3R 28831801 28831803 14 6924266 14.5 7.5 11.0 1.2 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_14_25365001 chr3R_25365001 RAL-822 2135 chr3R 21907536 21907536 chr3R 26659334 26659337 4 4751799 14.5 8.5 11.5 0.3 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_4_24280001 chr3R_24280001 RAL-822 2136 chr3R 21907536 21907536 chr3R 28831801 28831802 22 6924266 14.5 7.5 11.0 1.8 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_22_25365001 chr3R_25365001 RAL-822 2137 chr3R 21989081 21989136 chr3R 21989240 21989290 5 158 1.0 0.0 0.5 3.3 209 chr3R 21989081 intron Eip93F + chr3R 21989186 intron Eip93F + chr3R 21989290 intron Eip93F + chr3R_5_21985001 chr3R_21985001 RAL-822 2138 chr3R 22234694 22234714 chr3R 22236008 22236048 pogo 9 1336 3.5 5.5 4.5 1.6 1354 chr3R 22234694 intron SKIP + chr3R 22235371 intron SKIP + chr3R 22236048 intron SKIP + chr3R_9_22235001 chr3R_22235001 RAL-822 2139 chr3R 22239471 22239514 chr3R 22248558 22248592 roo 6 9082 8.0 0.0 4.0 1.2 9121 chr3R 22239471 intron SKIP + chr3R 22244032 intron SKIP + chr3R 22248592 intron SKIP + chr3R_6_22240001 chr3R_22240001 RAL-822 2140 chr3R 22316730 22316797 chr3R 22317755 22317797 11 1012 3.5 3.0 3.2 2.6 1067 chr3R 22316730 intron CG34377 - chr3R 22317264 intron CG34377 - chr3R 22317797 intron CG34377 - chr3R_11_22315001 chr3R_22315001 RAL-822 2141 chr3R 22348934 22348990 chr3R 22349315 22349362 11 382 3.5 10.5 7.0 1.4 428 chr3R 22348934 intergenic not near genes chr3R 22349148 intergenic not near genes chr3R 22349362 intergenic not near genes chr3R_11_22345001 chr3R_22345001 RAL-822 2142 chr3R 22421674 22421682 chr3R 22421770 22421800 6 110 4.5 2.0 3.2 1.4 126 chr3R 22421674 intron mats + chr3R 22421737 intron mats + chr3R 22421800 intron mats + chr3R_6_22420001 chr3R_22420001 RAL-822 2143 chr3R 22437763 22437809 chr3R 22437888 22437932 11 123 1.0 1.5 1.2 5.0 169 chr3R 22437763 intergenic not near genes chr3R 22437848 intergenic not near genes chr3R 22437932 intergenic not near genes chr3R_11_22435001 chr3R_22435001 RAL-822 2144 chr3R 22538428 22538472 chr3R 22538534 22538592 13 113 0.5 6.0 3.2 3.1 164 chr3R 22538428 intron CG5326 - chr3R 22538510 intron CG5326 - chr3R 22538592 intron CG5326 - chr3R_13_22535001 chr3R_22535001 RAL-822 2145 chr3R 22672277 22672323 chr3R 22672395 22672431 9 120 5.0 5.0 5.0 1.5 154 chr3R 22672277 intron wake + chr3R 22672354 intron wake + chr3R 22672431 intron wake + chr3R_9_22670001 chr3R_22670001 RAL-822 2146 chr3R 22769075 22769122 chr3R 22769168 22769219 14 97 3.5 3.5 3.5 3.1 144 chr3R 22769075 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769147 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769219 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_14_22765001 chr3R_22765001 RAL-822 2147 chr3R 22797760 22797936 chr3R 22797851 22798042 21 110 0.0 0.0 0.0 21.0 282 chr3R 22797760 intergenic not near genes chr3R 22797901 intergenic not near genes chr3R 22798042 intergenic not near genes chr3R_21_22795001 chr3R_22795001 RAL-822 2148 chr3R 22804649 22804691 chr3R 22804749 22804778 6 95 4.5 1.0 2.8 1.6 129 chr3R 22804649 intron CG7031 + chr3R 22804714 intron CG7031 + chr3R 22804778 exon CG7031 + chr3R_6_22800001 chr3R_22800001 RAL-822 2149 chr3R 22842372 22842420 chr3R 22842491 22842528 12 119 2.5 4.5 3.5 2.7 156 chr3R 22842372 intergenic not near genes chr3R 22842450 intergenic not near genes chr3R 22842528 intergenic not near genes chr3R_12_22840001 chr3R_22840001 RAL-822 2150 chr3R 22861210 22861238 chr3R 22861334 22861365 5 123 6.5 5.5 6.0 0.7 155 chr3R 22861210 intergenic not near genes chr3R 22861288 intergenic not near genes chr3R 22861365 intergenic not near genes chr3R_5_22860001 chr3R_22860001 RAL-822 2151 chr3R 22871405 22871466 chr3R 22871532 22871600 12 129 1.5 3.5 2.5 3.4 195 chr3R 22871405 intergenic not near genes chr3R 22871502 intergenic not near genes chr3R 22871600 intergenic not near genes chr3R_12_22870001 chr3R_22870001 RAL-822 2152 chr3R 22880902 22880960 chr3R 22881075 22881133 25 170 1.5 3.5 2.5 7.1 231 chr3R 22880902 intergenic not near genes chr3R 22881018 intergenic not near genes chr3R 22881133 intergenic not near genes chr3R_25_22880001 chr3R_22880001 RAL-822 2153 chr3R 22881183 22881230 chr3R 22884907 22884970 Doc 13 3736 5.5 3.0 4.2 2.5 3787 chr3R 22881183 intergenic not near genes chr3R 22883076 intergenic not near genes chr3R 22884970 intergenic not near genes chr3R_13_22880001 chr3R_22880001 RAL-822 2154 chr3R 22974300 22974311 chr3R 22974371 22974405 4 92 0.0 2.0 1.0 2.0 105 chr3R 22974300 intergenic not near genes chr3R 22974352 intergenic not near genes chr3R 22974405 intergenic not near genes chr3R_4_22970001 chr3R_22970001 RAL-822 2155 chr3R 23064868 23064895 chr3R 23064978 23065011 11 118 0.0 8.5 4.2 2.1 143 chr3R 23064868 intron CG17111 - chr3R 23064940 intron CG17111 - chr3R 23065011 intron CG17111 - chr3R_11_23060001 chr3R_23060001 RAL-822 2156 chr3R 23082917 23082974 chr3R 23083150 23083183 5 218 7.0 2.0 4.5 0.9 266 chr3R 23082917 intron CG13830 - chr3R 23083050 intron CG13830 - chr3R 23083183 intron CG13830 - chr3R_5_23080001 chr3R_23080001 RAL-822 2157 chr3R 23101386 23101406 chr3R 23101477 23101488 7 99 2.0 2.0 2.0 2.3 102 chr3R 23101386 intron CG13830 - chr3R 23101437 intron CG13830 - chr3R 23101488 intron CG13830 - chr3R_7_23100001 chr3R_23100001 RAL-822 2158 chr3R 23210634 23210670 chr3R 23210724 23210756 9 100 5.0 2.0 3.5 2.0 122 chr3R 23210634 intron cnc - chr3R 23210695 intron cnc - chr3R 23210756 intron cnc - chr3R_9_23210001 chr3R_23210001 RAL-822 2159 chr3R 23225025 23225050 chr3R 23225136 23225161 4 108 8.0 0.0 4.0 0.8 136 chr3R 23225025 intron cnc - chr3R 23225093 intron cnc - chr3R 23225161 intron cnc - chr3R_4_23225001 chr3R_23225001 RAL-822 2160 chr3R 23319656 23319665 chr3R 23319760 23319779 5 109 0.0 6.5 3.2 1.2 123 chr3R 23319656 intron pnt - chr3R 23319718 intron pnt - chr3R 23319779 intron pnt - chr3R_5_23315001 chr3R_23315001 RAL-822 2161 chr3R 23346805 23346867 chr3R 23346918 23346980 9 111 4.5 5.5 5.0 1.5 175 chr3R 23346805 intergenic not near genes chr3R 23346892 intergenic not near genes chr3R 23346980 intergenic not near genes chr3R_9_23345001 chr3R_23345001 RAL-822 2162 chr3R 23558378 23558424 chr3R 23560179 23560240 Bari1 13 1811 2.0 3.0 2.5 3.7 1862 chr3R 23558378 intron beat-IV + chr3R 23559309 intron beat-IV + chr3R 23560240 intron beat-IV + chr3R_13_23555001 chr3R_23555001 RAL-822 2163 chr3R 23572739 23572768 chr3R 23572883 23572920 5 142 1.5 2.5 2.0 1.7 181 chr3R 23572739 intron beat-IV + chr3R 23572830 intron beat-IV + chr3R 23572920 intron beat-IV + chr3R_5_23570001 chr3R_23570001 RAL-822 2164 chr3R 23601136 23601168 chr3R 23601270 23601302 5 131 5.0 3.0 4.0 1.0 166 chr3R 23601136 intergenic not near genes chr3R 23601219 intergenic not near genes chr3R 23601302 intergenic not near genes chr3R_5_23600001 chr3R_23600001 RAL-822 2165 chr3R 23688441 23688500 chr3R 23688567 23688590 4 108 4.0 0.5 2.2 1.2 149 chr3R 23688441 intergenic SPE + chr3R 23688516 intergenic SPE +,CG10254 - chr3R 23688590 intergenic CG10254 -,SPE + chr3R_4_23685001 chr3R_23685001 RAL-822 2166 chr3R 23835384 23835436 chr3R 23844566 23844619 roo 4 9181 3.5 0.5 2.0 1.3 9235 chr3R 23835384 intron CG34355 + chr3R 23840002 intron CG34355 + chr3R 23844619 intron CG34355 + chr3R_4_23840001 chr3R_23840001 RAL-822 2167 chr3R 23851066 23851084 chr3R 23858758 23858786 opus 6 7699 6.0 11.0 8.5 0.6 7720 chr3R 23851066 3` UTR CG34355 + chr3R 23854926 intergenic not near genes chr3R 23858786 intergenic not near genes chr3R_6_23850001 chr3R_23850001 RAL-822 2168 chr3R 23888053 23888061 chr3R 23888174 23888182 6 120 12.5 2.0 7.2 0.7 129 chr3R 23888053 intron Pli - chr3R 23888118 intron Pli - chr3R 23888182 intron Pli - chr3R_6_23885001 chr3R_23885001 RAL-822 2169 chr3R 23888064 23888113 chr3R 23888171 23888228 22 117 4.5 2.0 3.2 5.2 164 chr3R 23888064 intron Pli - chr3R 23888146 intron Pli - chr3R 23888228 intron Pli - chr3R_22_23885001 chr3R_23885001 RAL-822 2170 chr3R 23944888 23944905 chr3R 23945008 23945013 4 117 9.0 4.5 6.8 0.5 125 chr3R 23944888 intron CG12268 - chr3R 23944950 intron CG12268 - chr3R 23945013 intron CG12268 - chr3R_4_23940001 chr3R_23940001 RAL-822 2171 chr3R 23949009 23949016 chr3R 23949121 23949128 4 112 14.0 5.5 9.8 0.4 119 chr3R 23949009 intergenic not near genes chr3R 23949068 intergenic not near genes chr3R 23949128 intergenic not near genes chr3R_4_23945001 chr3R_23945001 RAL-822 2172 chr3R 23949017 23949074 chr3R 23949119 23949184 19 100 2.0 5.5 3.8 4.0 167 chr3R 23949017 intergenic not near genes chr3R 23949100 intergenic not near genes chr3R 23949184 intergenic not near genes chr3R_19_23945001 chr3R_23945001 RAL-822 2173 chr3R 24011639 24011676 chr3R 24011757 24011794 11 116 3.5 11.0 7.2 1.3 155 chr3R 24011639 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011794 intron KrT95D - chr3R_11_24010001 chr3R_24010001 RAL-822 2174 chr3R 24021606 24021654 chr3R 24021718 24021779 17 121 5.0 3.0 4.0 3.4 173 chr3R 24021606 intron KrT95D - chr3R 24021692 intron KrT95D - chr3R 24021779 intron KrT95D - chr3R_17_24020001 chr3R_24020001 RAL-822 2175 chr3R 24072065 24072106 chr3R 24072529 24072576 jockey 4 455 2.5 5.5 4.0 0.8 511 chr3R 24072065 intron 4EHP - chr3R 24072320 intron 4EHP - chr3R 24072576 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-822 2176 chr3R 24076906 24076947 chr3R 24078393 24078444 hobo 8 1493 4.0 3.5 3.8 1.7 1538 chr3R 24076906 intron 4EHP - chr3R 24077675 intron 4EHP - chr3R 24078444 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RAL-822 2177 chr3R 24173525 24173543 chr3R 24173642 24173650 5 114 9.0 6.5 7.8 0.6 125 chr3R 24173525 intron CG13606 + chr3R 24173588 intron CG13606 + chr3R 24173650 intron CG13606 + chr3R_5_24170001 chr3R_24170001 RAL-822 2178 chr3R 24203917 24203922 chr3R 24203986 24203991 4 73 2.5 0.5 1.5 1.6 74 chr3R 24203917 intron twin - chr3R 24203954 intron twin - chr3R 24203991 intron twin - chr3R_4_24200001 chr3R_24200001 RAL-822 2179 chr3R 24207195 24207236 chr3R 24212295 24212332 flea 4 5100 3.5 3.0 3.2 1.0 5137 chr3R 24207195 intron twin - chr3R 24209764 intron twin - chr3R 24212332 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-822 2180 chr3R 24431586 24431625 chr3R 24431700 24431724 14 109 6.0 4.0 5.0 2.3 138 chr3R 24431586 intron nAChRalpha1 - chr3R 24431655 intron nAChRalpha1 - chr3R 24431724 intron nAChRalpha1 - chr3R_14_24430001 chr3R_24430001 RAL-822 2181 chr3R 24493266 24493305 chr3R 24493525 24493560 BS 16 258 5.5 7.5 6.5 2.1 294 chr3R 24493266 intergenic not near genes chr3R 24493413 intergenic not near genes chr3R 24493560 intergenic not near genes chr3R_16_24490001 chr3R_24490001 RAL-822 2182 chr3R 24527779 24527835 chr3R 24527905 24527956 9 124 2.0 3.0 2.5 2.6 177 chr3R 24527779 intergenic CG13618 +,CG6607 + chr3R 24527868 intergenic CG6607 +,CG13618 + chr3R 24527956 intergenic CG6607 +,CG13618 + chr3R_9_24525001 chr3R_24525001 RAL-822 2183 chr3R 24573054 24573067 chr3R 24573186 24573213 4 144 2.0 4.0 3.0 1.0 159 chr3R 24573054 intron CG13624 - chr3R 24573134 intron CG13624 - chr3R 24573213 intron CG13624 - chr3R_4_24570001 chr3R_24570001 RAL-822 2184 chr3R 24576345 24576399 chr3R 24576458 24576511 5 112 0.0 8.0 4.0 1.0 166 chr3R 24576345 intron CG13624 - chr3R 24576428 intron CG13624 - chr3R 24576511 5` UTR CG13624 - chr3R_5_24575001 chr3R_24575001 RAL-822 2185 chr3R 24594643 24594667 chr3R 24594918 24594923 pogo 6 269 4.5 6.5 5.5 0.9 280 chr3R 24594643 intron mld + chr3R 24594783 intron mld + chr3R 24594923 intron mld + chr3R_6_24590001 chr3R_24590001 RAL-822 2186 chr3R 24667595 24667616 chr3R 24667699 24667713 4 106 3.5 0.0 1.8 1.4 118 chr3R 24667595 intron slo + chr3R 24667654 intron slo + chr3R 24667713 intron slo + chr3R_4_24665001 chr3R_24665001 RAL-822 2187 chr3R 24670034 24670163 chr3R 24670164 24670283 8 142 0.0 0.0 0.0 8.0 249 chr3R 24670034 intron slo + chr3R 24670158 intron slo + chr3R 24670283 intron slo + chr3R_8_24670001 chr3R_24670001 RAL-822 2188 chr3R 24741081 24741104 chr3R 24741198 24741211 8 126 3.0 4.5 3.8 1.7 130 chr3R 24741081 intron tok + chr3R 24741146 intron tok + chr3R 24741211 intron tok + chr3R_8_24740001 chr3R_24740001 RAL-822 2189 chr3R 24785055 24785068 chr3R 24785166 24785179 4 108 10.0 8.0 9.0 0.4 124 chr3R 24785055 3` UTR CG5805 - chr3R 24785117 3` UTR CG5805 - chr3R 24785179 3` UTR CG5805 - chr3R_4_24785001 chr3R_24785001 RAL-822 2190 chr3R 24785071 24785083 chr3R 24785158 24785194 9 101 6.5 8.0 7.2 1.1 123 chr3R 24785071 3` UTR CG5805 - chr3R 24785132 3` UTR CG5805 - chr3R 24785194 3` UTR CG5805 - chr3R_9_24785001 chr3R_24785001 RAL-822 2191 chr3R 24785085 24785111 chr3R 24785154 24785210 8 97 5.0 7.5 6.2 1.1 125 chr3R 24785085 3` UTR CG5805 - chr3R 24785148 3` UTR CG5805 - chr3R 24785210 3` UTR CG5805 - chr3R_8_24785001 chr3R_24785001 RAL-822 2192 chr3R 24810360 24810402 chr3R 24810491 24810533 10 125 3.5 6.0 4.8 1.7 173 chr3R 24810360 intron CG5807 - chr3R 24810446 intron CG5807 - chr3R 24810533 intron CG5807 - chr3R_10_24810001 chr3R_24810001 RAL-822 2193 chr3R 24815444 24815507 chr3R 24815783 24815806 11 316 4.5 4.5 4.5 2.0 362 chr3R 24815444 exon CG5808 - chr3R 24815625 exon CG5808 - chr3R 24815806 exon CG5808 - chr3R_11_24815001 chr3R_24815001 RAL-822 2194 chr3R 24927099 24927151 chr3R 24931925 24931935 Doc 16 4820 2.5 1.0 1.8 5.7 4836 chr3R 24927099 intergenic Trf4-2 + chr3R 24929517 intergenic not near genes chr3R 24931935 intergenic CG11771 + chr3R_16_24925001 chr3R_24925001 RAL-822 2195 chr3R 24974880 24974931 chr3R 24974994 24975033 8 107 2.5 3.0 2.8 2.1 153 chr3R 24974880 intergenic not near genes chr3R 24974956 intergenic not near genes chr3R 24975033 intergenic not near genes chr3R_8_24970001 chr3R_24970001 RAL-822 2196 chr3R 25053111 25053165 chr3R 25053215 25053249 8 97 0.0 4.0 2.0 2.7 138 chr3R 25053111 intergenic CG11791 +,CG31109 - chr3R 25053180 intergenic CG11791 +,CG31109 - chr3R 25053249 intergenic CG31109 -,CG11791 + chr3R_8_25050001 chr3R_25050001 RAL-822 2197 chr3R 25072731 25072792 chr3R 25072858 25072894 19 119 6.0 6.0 6.0 2.7 163 chr3R 25072731 3` UTR CG9996 - chr3R 25072812 3` UTR CG9996 - chr3R 25072894 exon CG9996 - chr3R_19_25070001 chr3R_25070001 RAL-822 2198 chr3R 25186383 25186430 chr3R 25186491 25186548 13 113 4.0 8.0 6.0 1.9 165 chr3R 25186383 intron,intron lobo -,dan + chr3R 25186466 intron,intron lobo -,dan + chr3R 25186548 intron,intron lobo -,dan + chr3R_13_25185001 chr3R_25185001 RAL-822 2199 chr3R 25269616 25269680 chr3R 25269904 25269913 14 276 3.5 3.5 3.5 3.1 297 chr3R 25269616 intron CR45214 - chr3R 25269764 intron CR45214 - chr3R 25269913 intron CR45214 - chr3R_14_25265001 chr3R_25265001 RAL-822 2200 chr3R 25288232 25288285 chr3R 25288520 25288578 17 284 3.5 4.0 3.8 3.5 346 chr3R 25288232 exon CG13658 + chr3R 25288405 exon CG13658 + chr3R 25288578 exon CG13658 + chr3R_17_25285001 chr3R_25285001 RAL-822 2201 chr3R 25368451 25368467 chr3R 25368596 25368608 7 149 3.0 0.0 1.5 2.8 157 chr3R 25368451 intron Fur1 - chr3R 25368530 intron Fur1 - chr3R 25368608 intron Fur1 - chr3R_7_25365001 chr3R_25365001 RAL-822 2202 chr3R 25431410 25431445 chr3R 25431529 25431566 10 118 1.5 2.0 1.8 3.6 156 chr3R 25431410 intron Fur1 - chr3R 25431488 intron Fur1 - chr3R 25431566 intron Fur1 - chr3R_10_25430001 chr3R_25430001 RAL-822 2203 chr3R 25512380 25512421 chr3R 25512472 25512535 10 96 3.0 2.0 2.5 2.9 155 chr3R 25512380 intergenic not near genes chr3R 25512458 intergenic not near genes chr3R 25512535 intergenic not near genes chr3R_10_25510001 chr3R_25510001 RAL-822 2204 chr3R 25528022 25528033 chr3R 25528140 25528169 5 129 11.0 6.5 8.8 0.5 147 chr3R 25528022 intron msi + chr3R 25528096 intron msi + chr3R 25528169 intron msi + chr3R_5_25525001 chr3R_25525001 RAL-822 2205 chr3R 7773341 7773344 chr3R 25538124 25538124 17 17764780 17.5 9.0 13.2 1.2 17764783 chr3R 7773341 intergenic not near genes chr3R 16655732 intergenic modSP - chr3R 25538124 intron msi + chr3R_17_16655001 chr3R_16655001 RAL-822 2206 chr3R 25591376 25591433 chr3R 25591485 25591520 7 105 2.5 0.0 1.2 3.2 144 chr3R 25591376 intron msi + chr3R 25591448 intron msi + chr3R 25591520 intron,3` UTR msi +,ymp - chr3R_7_25590001 chr3R_25590001 RAL-822 2207 chr3R 25614861 25614885 chr3R 25615161 25615185 5 299 8.0 4.0 6.0 0.7 324 chr3R 25614861 intron Npl4 - chr3R 25615023 intron Npl4 - chr3R 25615185 intron Npl4 - chr3R_5_25615001 chr3R_25615001 RAL-822 2208 chr3R 25614888 25614914 chr3R 25615152 25615214 11 288 4.0 4.0 4.0 2.2 326 chr3R 25614888 intron Npl4 - chr3R 25615051 intron Npl4 - chr3R 25615214 intron Npl4 - chr3R_11_25615001 chr3R_25615001 RAL-822 2209 chr3R 25652306 25652347 chr3R 25652398 25652436 20 102 4.0 5.0 4.5 3.6 130 chr3R 25652306 intergenic not near genes chr3R 25652371 intergenic not near genes chr3R 25652436 intergenic not near genes chr3R_20_25650001 chr3R_25650001 RAL-822 2210 chr3R 25725797 25725861 chr3R 25734990 25735046 roo 10 9188 1.0 4.0 2.5 2.9 9249 chr3R 25725797 intron LpR2 - chr3R 25730422 intron LpR2 - chr3R 25735046 intron LpR2 - chr3R_10_25730001 chr3R_25730001 RAL-822 2211 chr3R 25738607 25738641 chr3R 25738728 25738731 7 112 4.5 5.0 4.8 1.2 124 chr3R 25738607 intron LpR2 - chr3R 25738669 intron LpR2 - chr3R 25738731 intron LpR2 - chr3R_7_25735001 chr3R_25735001 RAL-822 2212 chr3R 25738644 25738662 chr3R 25738717 25738785 14 106 2.0 4.5 3.2 3.3 141 chr3R 25738644 intron LpR2 - chr3R 25738714 intron LpR2 - chr3R 25738785 intron LpR2 - chr3R_14_25735001 chr3R_25735001 RAL-822 2213 chr3R 25832668 25832709 chr3R 25841881 25841885 roo 5 9203 2.0 2.5 2.2 1.6 9217 chr3R 25832668 exon alpha4GT2 + chr3R 25837276 intron alpha4GT2 + chr3R 25841885 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-822 2214 chr3R 25843619 25843663 chr3R 25843784 25843828 18 162 3.5 5.0 4.2 3.5 209 chr3R 25843619 intergenic CR45653 + chr3R 25843724 intergenic CR45653 + chr3R 25843828 intergenic CR45653 + chr3R_18_25840001 chr3R_25840001 RAL-822 2215 chr3R 25867767 25867821 chr3R 25867978 25868032 13 206 3.5 5.0 4.2 2.5 265 chr3R 25867767 intron CG5890 + chr3R 25867900 intron CG5890 + chr3R 25868032 intron CG5890 + chr3R_13_25865001 chr3R_25865001 RAL-822 2216 chr3R 26122447 26122462 chr3R 26122553 26122560 4 102 5.5 10.0 7.8 0.5 113 chr3R 26122447 intron CG31324 + chr3R 26122504 intron CG31324 + chr3R 26122560 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-822 2217 chr3R 26180036 26180093 chr3R 26180468 26180518 9 422 3.5 4.0 3.8 1.9 482 chr3R 26180036 intron CG31323 + chr3R 26180277 intron CG31323 + chr3R 26180518 intron CG31323 + chr3R_9_26180001 chr3R_26180001 RAL-822 2218 chr3R 26235513 26235517 chr3R 26235575 26235624 4 82 1.0 2.0 1.5 1.6 111 chr3R 26235513 5` UTR CR42745 + chr3R 26235568 5` UTR CR42745 + chr3R 26235624 intron CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-822 2219 chr3R 26245021 26245057 chr3R 26245252 26245276 6 222 3.0 4.0 3.5 1.3 255 chr3R 26245021 intron CR42745 + chr3R 26245148 intron CR42745 + chr3R 26245276 intron CR42745 + chr3R_6_26245001 chr3R_26245001 RAL-822 2220 chr3R 26247273 26247274 chr3R 26247405 26247436 4 148 6.0 8.0 7.0 0.5 163 chr3R 26247273 intron CR42745 + chr3R 26247354 intron CR42745 + chr3R 26247436 intron CR42745 + chr3R_4_26245001 chr3R_26245001 RAL-822 2221 chr3R 26284207 26284246 chr3R 26284344 26284388 7 141 1.0 2.5 1.8 2.5 181 chr3R 26284207 intergenic not near genes chr3R 26284298 intergenic not near genes chr3R 26284388 intergenic not near genes chr3R_7_26280001 chr3R_26280001 RAL-822 2222 chr3R 26292080 26292131 chr3R 26292195 26292245 8 112 2.5 6.0 4.2 1.5 165 chr3R 26292080 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292245 intergenic not near genes chr3R_8_26290001 chr3R_26290001 RAL-822 2223 chr3R 26294682 26294746 chr3R 26294795 26294837 19 103 5.0 3.5 4.2 3.7 155 chr3R 26294682 intergenic not near genes chr3R 26294760 intergenic not near genes chr3R 26294837 intergenic not near genes chr3R_19_26290001 chr3R_26290001 RAL-822 2224 chr3R 26325691 26325709 chr3R 26325773 26325790 7 86 1.5 6.5 4.0 1.4 99 chr3R 26325691 intron CG33970 + chr3R 26325740 intron CG33970 + chr3R 26325790 intron CG33970 + chr3R_7_26325001 chr3R_26325001 RAL-822 2225 chr3R 26349232 26349251 chr3R 26349363 26349383 7 131 4.0 0.0 2.0 2.3 151 chr3R 26349232 intron CG33970 + chr3R 26349308 intron CG33970 + chr3R 26349383 intron CG33970 + chr3R_7_26345001 chr3R_26345001 RAL-822 2226 chr3R 26365081 26365141 chr3R 26365201 26365260 5 117 0.5 3.5 2.0 1.7 179 chr3R 26365081 intergenic not near genes chr3R 26365170 intergenic not near genes chr3R 26365260 intergenic not near genes chr3R_5_26365001 chr3R_26365001 RAL-822 2227 chr3R 26376306 26376322 chr3R 26385501 26385517 roo 4 9195 8.0 0.0 4.0 0.8 9211 chr3R 26376306 intergenic not near genes chr3R 26380912 intergenic not near genes chr3R 26385517 intergenic not near genes chr3R_4_26380001 chr3R_26380001 RAL-822 2228 chr3R 26376335 26376358 chr3R 26385495 26385501 roo 6 9156 3.0 0.0 1.5 2.4 9166 chr3R 26376335 intergenic not near genes chr3R 26380918 intergenic not near genes chr3R 26385501 intergenic not near genes chr3R_6_26380001 chr3R_26380001 RAL-822 2229 chr3R 26386864 26386920 chr3R 26386978 26387034 7 108 3.0 5.5 4.2 1.3 170 chr3R 26386864 intergenic not near genes chr3R 26386949 intergenic not near genes chr3R 26387034 intergenic not near genes chr3R_7_26385001 chr3R_26385001 RAL-822 2230 chr3R 26405891 26405940 chr3R 26406002 26406043 9 106 0.0 1.5 0.8 5.0 152 chr3R 26405891 intergenic not near genes chr3R 26405967 intergenic not near genes chr3R 26406043 intergenic not near genes chr3R_9_26405001 chr3R_26405001 RAL-822 2231 chr3R 26485877 26485924 chr3R 26486006 26486058 19 133 2.0 2.5 2.2 5.9 181 chr3R 26485877 intron plum - chr3R 26485968 intron plum - chr3R 26486058 intron plum - chr3R_19_26485001 chr3R_26485001 RAL-822 2232 chr3R 26491381 26491404 chr3R 26491470 26491500 6 97 2.0 1.5 1.8 2.1 119 chr3R 26491381 intron plum - chr3R 26491440 intron plum - chr3R 26491500 intron plum - chr3R_6_26490001 chr3R_26490001 RAL-822 2233 chr3R 26510231 26510282 chr3R 26510377 26510426 8 131 2.0 4.0 3.0 2.0 195 chr3R 26510231 intron plum - chr3R 26510328 intron plum - chr3R 26510426 intron plum - chr3R_8_26510001 chr3R_26510001 RAL-822 2234 chr3R 26510491 26510535 chr3R 26519576 26519619 roo 10 9079 4.0 9.0 6.5 1.3 9128 chr3R 26510491 intron plum - chr3R 26515055 intron plum - chr3R 26519619 intron,5` UTR plum -,CR45226 + chr3R_10_26515001 chr3R_26515001 RAL-822 2235 chr3R 26577484 26577530 chr3R 26577582 26577591 6 93 1.5 5.5 3.5 1.3 107 chr3R 26577484 intron scrib + chr3R 26577538 intron scrib + chr3R 26577591 intron scrib + chr3R_6_26575001 chr3R_26575001 RAL-822 2236 chr3R 26642736 26642750 chr3R 26643155 26643165 jockey 4 420 5.0 7.5 6.2 0.6 429 chr3R 26642736 intergenic not near genes chr3R 26642950 intergenic not near genes chr3R 26643165 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-822 2237 chr3R 26810523 26810586 chr3R 26811043 26811091 roo 11 507 3.5 2.0 2.8 2.9 568 chr3R 26810523 intron Tl + chr3R 26810807 intron Tl + chr3R 26811091 intron Tl + chr3R_11_26810001 chr3R_26810001 RAL-822 2238 chr3R 26901519 26901525 chr3R 26901624 26901635 4 110 8.5 0.0 4.2 0.8 116 chr3R 26901519 intron T48 + chr3R 26901577 intron T48 + chr3R 26901635 intron T48 + chr3R_4_26900001 chr3R_26900001 RAL-822 2239 chr3R 27007384 27007429 chr3R 27016541 27016599 roo 18 9161 9.5 2.5 6.0 2.6 9215 chr3R 27007384 intron RYa-R + chr3R 27011992 intron RYa-R + chr3R 27016599 intron RYa-R + chr3R_18_27010001 chr3R_27010001 RAL-822 2240 chr3R 27027645 27027692 chr3R 27027764 27027809 7 111 7.0 1.5 4.2 1.3 164 chr3R 27027645 intron RYa-R + chr3R 27027727 intron RYa-R + chr3R 27027809 intron RYa-R + chr3R_7_27025001 chr3R_27025001 RAL-822 2241 chr3R 27028688 27028755 chr3R 27028802 27028869 19 110 1.5 3.5 2.5 5.4 181 chr3R 27028688 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028869 intron RYa-R + chr3R_19_27025001 chr3R_27025001 RAL-822 2242 chr3R 27091541 27091564 chr3R 27091645 27091660 8 104 8.0 0.0 4.0 1.6 119 chr3R 27091541 intergenic Cpr97Eb - chr3R 27091600 intergenic Cpr97Eb - chr3R 27091660 intergenic not near genes chr3R_8_27090001 chr3R_27090001 RAL-822 2243 chr3R 27140493 27140542 chr3R 27148132 27148187 412 11 7635 4.5 6.0 5.2 1.8 7694 chr3R 27140493 intron CG6051 - chr3R 27144340 intron CG6051 - chr3R 27148187 intron CG6051 - chr3R_11_27140001 chr3R_27140001 RAL-822 2244 chr3R 27315964 27316004 chr3R 27316075 27316094 7 103 3.0 0.5 1.8 2.5 130 chr3R 27315964 intron CG3339 - chr3R 27316029 intron CG3339 - chr3R 27316094 exon CG3339 - chr3R_7_27315001 chr3R_27315001 RAL-822 2245 chr3R 27329476 27329496 chr3R 27329560 27329608 5 100 2.0 6.0 4.0 1.0 132 chr3R 27329476 intergenic CG3330 - chr3R 27329542 intergenic CG3330 - chr3R 27329608 intergenic CG3330 - chr3R_5_27325001 chr3R_27325001 RAL-822 2246 chr3R 27342768 27342818 chr3R 27351379 27351402 Tirant 7 8605 2.5 3.0 2.8 1.8 8634 chr3R 27342768 intron CG42534 + chr3R 27347085 intron CG42534 + chr3R 27351402 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-822 2247 chr3R 27353299 27353316 chr3R 27353409 27353425 6 115 6.5 2.5 4.5 1.1 126 chr3R 27353299 intron CG42534 + chr3R 27353362 intron CG42534 + chr3R 27353425 intron CG42534 + chr3R_6_27350001 chr3R_27350001 RAL-822 2248 chr3R 27398014 27398021 chr3R 27398140 27398154 4 130 8.5 1.5 5.0 0.7 140 chr3R 27398014 intron side - chr3R 27398084 intron side - chr3R 27398154 intron side - chr3R_4_27395001 chr3R_27395001 RAL-822 2249 chr3R 27398036 27398059 chr3R 27398134 27398192 6 119 6.5 1.5 4.0 1.2 156 chr3R 27398036 intron side - chr3R 27398114 intron side - chr3R 27398192 exon side - chr3R_6_27395001 chr3R_27395001 RAL-822 2250 chr3R 27448838 27448894 chr3R 27448941 27448989 12 100 2.0 2.0 2.0 4.0 151 chr3R 27448838 intergenic not near genes chr3R 27448914 intergenic not near genes chr3R 27448989 intergenic not near genes chr3R_12_27445001 chr3R_27445001 RAL-822 2251 chr3R 27449170 27449199 chr3R 27449245 27449269 11 86 2.0 1.0 1.5 4.4 99 chr3R 27449170 intergenic not near genes chr3R 27449220 intergenic not near genes chr3R 27449269 intergenic not near genes chr3R_11_27445001 chr3R_27445001 RAL-822 2252 chr3R 27454273 27454282 chr3R 27455364 27455388 4 1088 11.0 26.0 18.5 0.2 1115 chr3R 27454273 intergenic not near genes chr3R 27454830 intergenic not near genes chr3R 27455388 intergenic not near genes chr3R_4_27450001 chr3R_27450001 RAL-822 2253 chr3R 27492342 27492402 chr3R 27492464 27492508 11 117 3.5 0.5 2.0 3.7 166 chr3R 27492342 intergenic not near genes chr3R 27492425 intergenic not near genes chr3R 27492508 intergenic not near genes chr3R_11_27490001 chr3R_27490001 RAL-822 2254 chr3R 27496558 27496603 chr3R 27496698 27496743 7 137 4.5 3.0 3.8 1.5 185 chr3R 27496558 intergenic not near genes chr3R 27496650 intergenic not near genes chr3R 27496743 intergenic not near genes chr3R_7_27495001 chr3R_27495001 RAL-822 2255 chr3R 27506265 27506318 chr3R 27506382 27506432 8 114 0.5 5.0 2.8 2.1 167 chr3R 27506265 intergenic not near genes chr3R 27506348 intergenic not near genes chr3R 27506432 intergenic not near genes chr3R_8_27505001 chr3R_27505001 RAL-822 2256 chr3R 27514648 27514700 chr3R 27514811 27514843 10 158 1.0 5.0 3.0 2.5 195 chr3R 27514648 intergenic not near genes chr3R 27514746 intergenic not near genes chr3R 27514843 intergenic not near genes chr3R_10_27510001 chr3R_27510001 RAL-822 2257 chr3R 27521132 27521147 chr3R 27530374 27530391 roo 4 9244 10.5 5.0 7.8 0.5 9259 chr3R 27521132 intron CG12885 + chr3R 27525762 intron CG12885 + chr3R 27530391 intron CG12885 + chr3R_4_27525001 chr3R_27525001 RAL-822 2258 chr3R 27521154 27521184 chr3R 27530371 27530418 roo 13 9239 7.5 5.0 6.2 1.8 9264 chr3R 27521154 intron CG12885 + chr3R 27525786 intron CG12885 + chr3R 27530418 intron CG12885 + chr3R_13_27525001 chr3R_27525001 RAL-822 2259 chr3R 27705378 27705386 chr3R 27705438 27705466 5 76 3.0 3.0 3.0 1.2 88 chr3R 27705378 exon CG12428 - chr3R 27705422 intron CG12428 - chr3R 27705466 exon CG12428 - chr3R_5_27705001 chr3R_27705001 RAL-822 2260 chr3R 27725543 27725596 chr3R 27731020 27731064 I-element 8 5476 3.0 3.0 3.0 2.0 5521 chr3R 27725543 intergenic not near genes chr3R 27728304 intergenic not near genes chr3R 27731064 intergenic not near genes chr3R_8_27725001 chr3R_27725001 RAL-822 2261 chr3R 27799920 27799958 chr3R 27800027 27800066 11 112 3.0 3.5 3.2 2.6 146 chr3R 27799920 intron CG34353 - chr3R 27799993 intron CG34353 - chr3R 27800066 intron CG34353 - chr3R_11_27795001 chr3R_27795001 RAL-822 2262 chr3R 27841102 27841133 chr3R 27841189 27841191 6 90 1.5 1.5 1.5 2.4 89 chr3R 27841102 intron CG34353 - chr3R 27841146 intron CG34353 - chr3R 27841191 intron CG34353 - chr3R_6_27840001 chr3R_27840001 RAL-822 2263 chr3R 27856738 27856774 chr3R 27858255 27858274 hopper2 7 1512 9.0 4.5 6.8 0.9 1536 chr3R 27856738 intron CG34353 - chr3R 27857506 intron CG34353 - chr3R 27858274 intron CG34353 - chr3R_7_27855001 chr3R_27855001 RAL-822 2264 chr3R 27862926 27862976 chr3R 27868262 27868315 Transpac 12 5330 5.5 1.0 3.2 2.9 5389 chr3R 27862926 intron CG34353 - chr3R 27865620 intron CG34353 - chr3R 27868315 intron CG34353 - chr3R_12_27865001 chr3R_27865001 RAL-822 2265 chr3R 27875696 27875724 chr3R 27882762 27882799 297 9 7078 6.0 6.0 6.0 1.3 7103 chr3R 27875696 intron CG34353 - chr3R 27879248 intron CG34353 - chr3R 27882799 intron CG34353 - chr3R_9_27875001 chr3R_27875001 RAL-822 2266 chr3R 27894903 27894965 chr3R 27895040 27895071 17 119 3.5 2.5 3.0 4.2 168 chr3R 27894903 intron CG34353 - chr3R 27894987 intron CG34353 - chr3R 27895071 intron CG34353 - chr3R_17_27890001 chr3R_27890001 RAL-822 2267 chr3R 28040957 28040967 chr3R 28041073 28041083 4 116 0.0 3.0 1.5 1.6 126 chr3R 28040957 intron CG34362 + chr3R 28041020 intron CG34362 + chr3R 28041083 intron CG34362 + chr3R_4_28040001 chr3R_28040001 RAL-822 2268 chr3R 28080699 28080717 chr3R 28080823 28080842 5 124 10.5 0.5 5.5 0.8 143 chr3R 28080699 intron CG34362 + chr3R 28080770 intron CG34362 + chr3R 28080842 intron CG34362 + chr3R_5_28080001 chr3R_28080001 RAL-822 2269 chr3R 28118843 28118858 chr3R 28118951 28118957 4 104 6.5 8.5 7.5 0.5 114 chr3R 28118843 intergenic not near genes chr3R 28118900 intergenic not near genes chr3R 28118957 intergenic not near genes chr3R_4_28115001 chr3R_28115001 RAL-822 2270 chr3R 28173651 28173700 chr3R 28181101 28181136 mdg1 11 7456 5.0 4.0 4.5 2.0 7485 chr3R 28173651 intron CG34354 + chr3R 28177394 intron CG34354 + chr3R 28181136 intron CG34354 + chr3R_11_28175001 chr3R_28175001 RAL-822 2271 chr3R 28215837 28215848 chr3R 28215898 28215930 6 76 1.5 3.0 2.2 1.9 93 chr3R 28215837 intron CG34354 + chr3R 28215884 intron CG34354 + chr3R 28215930 intron CG34354 + chr3R_6_28215001 chr3R_28215001 RAL-822 2272 chr3R 28253336 28253358 chr3R 28255858 28255863 jockey 8 2522 5.0 3.0 4.0 1.6 2527 chr3R 28253336 intergenic not near genes chr3R 28254600 intergenic not near genes chr3R 28255863 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-822 2273 chr3R 28302091 28302138 chr3R 28302555 28302559 jockey 18 462 5.5 8.5 7.0 2.2 468 chr3R 28302091 intergenic not near genes chr3R 28302325 intergenic not near genes chr3R 28302559 intergenic not near genes chr3R_18_28300001 chr3R_28300001 RAL-822 2274 chr3R 28331489 28331523 chr3R 28331603 28331637 8 112 2.5 7.5 5.0 1.3 148 chr3R 28331489 intron larp - chr3R 28331563 intron larp - chr3R 28331637 intron larp - chr3R_8_28330001 chr3R_28330001 RAL-822 2275 chr3R 28345628 28345661 chr3R 28345729 28345772 6 105 8.5 4.0 6.2 0.8 144 chr3R 28345628 intergenic Moca-cyp + chr3R 28345700 intergenic not near genes chr3R 28345772 intergenic not near genes chr3R_6_28345001 chr3R_28345001 RAL-822 2276 chr3R 28393669 28393728 chr3R 28393797 28393853 13 130 4.0 3.0 3.5 2.9 184 chr3R 28393669 intergenic not near genes chr3R 28393761 intergenic not near genes chr3R 28393853 intergenic not near genes chr3R_13_28390001 chr3R_28390001 RAL-822 2277 chr3R 28425206 28425218 chr3R 28425274 28425301 9 75 1.0 1.0 1.0 4.5 95 chr3R 28425206 intron beat-VI + chr3R 28425254 intron beat-VI + chr3R 28425301 intron beat-VI + chr3R_9_28425001 chr3R_28425001 RAL-822 2278 chr3R 28478454 28478519 chr3R 28478565 28478574 12 98 5.0 6.0 5.5 1.8 120 chr3R 28478454 intergenic not near genes chr3R 28478514 intergenic not near genes chr3R 28478574 intergenic not near genes chr3R_12_28475001 chr3R_28475001 RAL-822 2279 chr3R 28479109 28479168 chr3R 28479242 28479287 16 119 1.0 2.0 1.5 6.4 178 chr3R 28479109 intergenic not near genes chr3R 28479198 intergenic not near genes chr3R 28479287 intergenic not near genes chr3R_16_28475001 chr3R_28475001 RAL-822 2280 chr3R 28616457 28616479 chr3R 28616586 28616597 5 127 0.0 8.0 4.0 1.0 140 chr3R 28616457 intron CG10011 - chr3R 28616527 intron CG10011 - chr3R 28616597 intron CG10011 - chr3R_5_28615001 chr3R_28615001 RAL-822 2281 chr3R 28616481 28616500 chr3R 28616579 28616629 11 115 0.0 7.0 3.5 2.4 148 chr3R 28616481 intron CG10011 - chr3R 28616555 intron CG10011 - chr3R 28616629 intron CG10011 - chr3R_11_28615001 chr3R_28615001 RAL-822 2282 chr3R 28638897 28638949 chr3R 28640206 28640238 11 1302 21.5 14.0 17.8 0.6 1341 chr3R 28638897 intergenic CG9988 + chr3R 28639568 intergenic not near genes chr3R 28640238 intergenic not near genes chr3R_11_28635001 chr3R_28635001 RAL-822 2283 chr3R 28637820 28637857 chr3R 28640264 28640322 11 2465 21.5 7.5 14.5 0.7 2502 chr3R 28637820 exon CG9988 + chr3R 28639071 intergenic CG9988 + chr3R 28640322 intergenic not near genes chr3R_11_28635001 chr3R_28635001 RAL-822 2284 chr3R 28758263 28758267 chr3R 28763905 28763919 roo 4 5650 9.0 0.0 4.5 0.7 5656 chr3R 28758263 intergenic aqrs - chr3R 28761091 intergenic not near genes chr3R 28763919 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-822 2285 chr3R 21907534 21907536 chr3R 28831798 28831802 41 6924266 14.5 7.5 11.0 3.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_41_25365001 chr3R_25365001 RAL-822 2286 chr3R 28960483 28960533 chr3R 28960596 28960653 13 110 3.5 5.0 4.2 2.5 170 chr3R 28960483 intron CG14521 - chr3R 28960568 intron CG14521 - chr3R 28960653 intron CG14521 - chr3R_13_28960001 chr3R_28960001 RAL-822 2287 chr3R 28985044 28985086 chr3R 28985171 28985225 8 133 0.5 1.5 1.0 4.0 181 chr3R 28985044 intergenic not near genes chr3R 28985134 intergenic not near genes chr3R 28985225 intergenic not near genes chr3R_8_28985001 chr3R_28985001 RAL-822 2288 chr3R 29032755 29032777 chr3R 29032822 29032835 8 73 5.0 2.0 3.5 1.8 80 chr3R 29032755 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032795 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032835 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_8_29030001 chr3R_29030001 RAL-822 2289 chr3R 29054008 29054030 chr3R 29054116 29054136 4 105 12.0 3.0 7.5 0.5 128 chr3R 29054008 intergenic CG11842 +,CG11843 + chr3R 29054072 intergenic CG11842 +,CG11843 + chr3R 29054136 intergenic CG11843 +,CG11842 + chr3R_4_29050001 chr3R_29050001 RAL-822 2290 chr3R 29054031 29054044 chr3R 29054100 29054109 4 80 9.0 3.0 6.0 0.6 78 chr3R 29054031 intergenic CG11842 +,CG11843 + chr3R 29054070 intergenic CG11842 +,CG11843 + chr3R 29054109 intergenic CG11842 +,CG11843 + chr3R_4_29050001 chr3R_29050001 RAL-822 2291 chr3R 29070021 29070077 chr3R 29070137 29070186 20 113 3.5 6.5 5.0 3.3 165 chr3R 29070021 intron CG11873 + chr3R 29070104 intron CG11873 + chr3R 29070186 intron CG11873 + chr3R_20_29070001 chr3R_29070001 RAL-822 2292 chr3R 29079364 29079386 chr3R 29080754 29080787 NOF 7 1402 4.5 6.0 5.2 1.1 1423 chr3R 29079364 intron CG11873 + chr3R 29080076 intron CG11873 + chr3R 29080787 intron CG11873 + chr3R_7_29080001 chr3R_29080001 RAL-822 2293 chr3R 29079395 29079408 chr3R 29080751 29080792 NOF 6 1388 2.5 5.5 4.0 1.2 1397 chr3R 29079395 intron CG11873 + chr3R 29080094 intron CG11873 + chr3R 29080792 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RAL-822 2294 chr3R 29213033 29213092 chr3R 29213141 29213187 12 106 6.0 4.0 5.0 2.0 154 chr3R 29213033 intergenic not near genes chr3R 29213110 intergenic not near genes chr3R 29213187 intergenic not near genes chr3R_12_29210001 chr3R_29210001 RAL-822 2295 chr3R 29237269 29237540 chr3R 29239284 29239453 5 1977 16.5 7.5 12.0 0.4 2184 chr3R 29237269 exon CG11951 - chr3R 29238361 intron CG11951 - chr3R 29239453 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-822 2296 chr3R 29240449 29240502 chr3R 29240568 29240621 13 118 4.0 5.5 4.8 2.2 172 chr3R 29240449 intergenic CG31427 -,CG31445 - chr3R 29240535 intergenic CG31445 -,CG31427 - chr3R 29240621 3` UTR CG31445 - chr3R_13_29240001 chr3R_29240001 RAL-822 2297 chr3R 29256234 29256274 chr3R 29256347 29256363 8 104 2.5 3.5 3.0 2.0 129 chr3R 29256234 intergenic CG45544 +,stg - chr3R 29256298 intergenic CG45544 +,stg - chr3R 29256363 intergenic CG45544 + chr3R_8_29255001 chr3R_29255001 RAL-822 2298 chr3R 29319810 29319849 chr3R 29320158 29320175 jockey 10 346 8.0 6.5 7.2 1.2 365 chr3R 29319810 intergenic Cnx99A - chr3R 29319992 intergenic Cnx99A - chr3R 29320175 intergenic not near genes chr3R_10_29315001 chr3R_29315001 RAL-822 2299 chr3R 29332267 29332301 chr3R 29332379 29332392 5 108 2.0 1.0 1.5 2.0 125 chr3R 29332267 intergenic not near genes chr3R 29332330 intergenic not near genes chr3R 29332392 intergenic not near genes chr3R_5_29330001 chr3R_29330001 RAL-822 2300 chr3R 29402971 29402996 chr3R 29403082 29403126 8 124 3.0 3.5 3.2 1.9 155 chr3R 29402971 intron Ptp99A + chr3R 29403048 intron Ptp99A + chr3R 29403126 intron Ptp99A + chr3R_8_29400001 chr3R_29400001 RAL-822 2301 chr3R 29406612 29406646 chr3R 29407903 29407935 jockey 7 1295 2.0 7.0 4.5 1.3 1323 chr3R 29406612 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407935 intron Ptp99A + chr3R_7_29405001 chr3R_29405001 RAL-822 2302 chr3R 29449332 29449387 chr3R 29449445 29449490 15 104 4.0 9.0 6.5 2.0 158 chr3R 29449332 intron Ptp99A + chr3R 29449411 intron Ptp99A + chr3R 29449490 intron Ptp99A + chr3R_15_29445001 chr3R_29445001 RAL-822 2303 chr3R 29526207 29526259 chr3R 29526319 29526381 10 113 1.5 3.5 2.5 2.9 174 chr3R 29526207 intergenic not near genes chr3R 29526294 intergenic not near genes chr3R 29526381 intergenic not near genes chr3R_10_29525001 chr3R_29525001 RAL-822 2304 chr3R 29539396 29539443 chr3R 29539506 29539533 4 103 3.0 0.0 1.5 1.6 137 chr3R 29539396 intergenic not near genes chr3R 29539464 intergenic not near genes chr3R 29539533 intergenic not near genes chr3R_4_29535001 chr3R_29535001 RAL-822 2305 chr3R 29565755 29565764 chr3R 29565863 29565872 4 110 3.0 2.5 2.8 1.1 117 chr3R 29565755 intergenic not near genes chr3R 29565814 intergenic not near genes chr3R 29565872 intergenic not near genes chr3R_4_29565001 chr3R_29565001 RAL-822 2306 chr3R 29621035 29621072 chr3R 29621137 29621165 6 94 3.5 1.0 2.2 1.9 130 chr3R 29621035 intergenic CG1907 + chr3R 29621100 intergenic CG1907 + chr3R 29621165 intergenic CG1907 + chr3R_6_29620001 chr3R_29620001 RAL-822 2307 chr3R 29627026 29627035 chr3R 29627148 29627157 6 122 0.0 0.5 0.2 5.0 131 chr3R 29627026 intergenic not near genes chr3R 29627092 intergenic not near genes chr3R 29627157 intergenic not near genes chr3R_6_29625001 chr3R_29625001 RAL-822 2308 chr3R 29655617 29655685 chr3R 29655731 29655789 4 112 2.0 0.0 1.0 2.0 172 chr3R 29655617 intron Dop1R2 - chr3R 29655703 intron Dop1R2 - chr3R 29655789 intron Dop1R2 - chr3R_4_29655001 chr3R_29655001 RAL-822 2309 chr3R 29738246 29738295 chr3R 29739733 29739787 hobo 9 1491 1.5 4.5 3.0 2.2 1541 chr3R 29738246 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739787 5` UTR CG1969 + chr3R_9_29735001 chr3R_29735001 RAL-822 2310 chr3R 29754938 29754945 chr3R 29755043 29755056 4 109 2.0 3.5 2.8 1.1 118 chr3R 29754938 intergenic CR44953 -,yata + chr3R 29754997 intergenic CR44953 -,yata + chr3R 29755056 intergenic CR44953 - chr3R_4_29750001 chr3R_29750001 RAL-822 2311 chr3R 29758932 29758967 chr3R 29759015 29759056 21 102 4.5 6.0 5.2 3.4 124 chr3R 29758932 3` UTR CR44953 - chr3R 29758994 3` UTR CR44953 - chr3R 29759056 intergenic CR44953 - chr3R_21_29755001 chr3R_29755001 RAL-822 2312 chr3R 29760342 29760348 chr3R 29761568 29761584 pogo 4 1234 8.5 2.5 5.5 0.6 1242 chr3R 29760342 intergenic not near genes chr3R 29760963 intergenic not near genes chr3R 29761584 intergenic not near genes chr3R_4_29760001 chr3R_29760001 RAL-822 2313 chr3R 29760350 29760389 chr3R 29761565 29761609 pogo 12 1220 3.0 2.5 2.8 3.2 1259 chr3R 29760350 intergenic not near genes chr3R 29760980 intergenic not near genes chr3R 29761609 intergenic not near genes chr3R_12_29760001 chr3R_29760001 RAL-822 2314 chr3R 29768464 29768570 chr3R 29768566 29768681 7 122 0.0 0.0 0.0 7.0 217 chr3R 29768464 intron kay + chr3R 29768572 intron kay + chr3R 29768681 intron kay + chr3R_7_29765001 chr3R_29765001 RAL-822 2315 chr3R 29773862 29773891 chr3R 29773966 29773979 8 107 5.0 0.0 2.5 2.3 117 chr3R 29773862 intron kay + chr3R 29773920 intron kay + chr3R 29773979 intron kay + chr3R_8_29770001 chr3R_29770001 RAL-822 2316 chr3R 29854816 29854855 chr3R 29854906 29854961 9 94 3.5 1.0 2.2 2.8 145 chr3R 29854816 3` UTR dgt1 - chr3R 29854888 exon dgt1 - chr3R 29854961 exon dgt1 - chr3R_9_29850001 chr3R_29850001 RAL-822 2317 chr3R 29882004 29882050 chr3R 29891180 29891226 roo 18 9174 4.5 4.5 4.5 3.3 9222 chr3R 29882004 intron CG31038 + chr3R 29886615 intron CG31038 + chr3R 29891226 intron CG31038 + chr3R_18_29885001 chr3R_29885001 RAL-822 2318 chr3R 29949569 29949616 chr3R 29949660 29949720 17 109 3.5 4.0 3.8 3.5 151 chr3R 29949569 intergenic not near genes chr3R 29949644 intergenic not near genes chr3R 29949720 intergenic not near genes chr3R_17_29945001 chr3R_29945001 RAL-822 2319 chr3R 30032141 30032178 chr3R 30032245 30032257 8 90 1.5 6.0 3.8 1.7 116 chr3R 30032141 intron Axn + chr3R 30032199 intron Axn + chr3R 30032257 intron Axn + chr3R_8_30030001 chr3R_30030001 RAL-822 2320 chr3R 30077896 30077939 chr3R 30077993 30078007 13 104 3.0 2.0 2.5 3.7 111 chr3R 30077896 intron sima + chr3R 30077952 intron sima + chr3R 30078007 intron sima + chr3R_13_30075001 chr3R_30075001 RAL-822 2321 chr3R 30084864 30084869 chr3R 30086337 30086371 hobo 5 1485 0.0 3.5 1.8 1.8 1507 chr3R 30084864 intron sima + chr3R 30085618 intron sima + chr3R 30086371 intron sima + chr3R_5_30085001 chr3R_30085001 RAL-822 2322 chr3R 30175667 30175719 chr3R 30175787 30175818 7 115 6.0 4.5 5.2 1.1 151 chr3R 30175667 intergenic CG1983 - chr3R 30175742 intergenic CG1983 - chr3R 30175818 3` UTR CG1983 - chr3R_7_30175001 chr3R_30175001 RAL-822 2323 chr3R 30217444 30217488 chr3R 30217559 30217583 9 111 5.0 4.5 4.8 1.6 139 chr3R 30217444 intergenic not near genes chr3R 30217514 intergenic not near genes chr3R 30217583 intergenic not near genes chr3R_9_30215001 chr3R_30215001 RAL-822 2324 chr3R 30238745 30238797 chr3R 30239923 30239972 1360 18 1188 5.5 7.5 6.5 2.4 1227 chr3R 30238745 intergenic not near genes chr3R 30239358 intergenic not near genes chr3R 30239972 intergenic not near genes chr3R_18_30235001 chr3R_30235001 RAL-822 2325 chr3R 7773344 7773344 chr3R 30278264 30278264 7 22504920 17.5 8.0 12.8 0.5 22504920 chr3R 7773344 intergenic not near genes chr3R 19025804 exon CG14285 + chr3R 30278264 5` UTR hdc + chr3R_7_19025001 chr3R_19025001 RAL-822 2326 chr3R 30375529 30375566 chr3R 30383187 30383214 412 4 7652 2.5 2.5 2.5 1.1 7685 chr3R 30375529 intergenic not near genes chr3R 30379372 intergenic not near genes chr3R 30383214 intergenic not near genes chr3R_4_30375001 chr3R_30375001 RAL-822 2327 chr3R 30396194 30396242 chr3R 30404490 30404523 roo 12 8295 3.0 4.5 3.8 2.5 8329 chr3R 30396194 intergenic not near genes chr3R 30400358 intergenic not near genes chr3R 30404523 5` UTR CR45570 + chr3R_12_30400001 chr3R_30400001 RAL-822 2328 chr3R 30462262 30462300 chr3R 30462840 30462856 5 572 2.0 0.5 1.2 2.3 594 chr3R 30462262 intron CDase + chr3R 30462559 intron CDase + chr3R 30462856 exon CDase + chr3R_5_30460001 chr3R_30460001 RAL-822 2329 chr3R 30466701 30466719 chr3R 30466797 30466833 4 102 1.5 5.0 3.2 1.0 132 chr3R 30466701 intron PH4alphaEFB + chr3R 30466767 intron PH4alphaEFB + chr3R 30466833 intron PH4alphaEFB + chr3R_4_30465001 chr3R_30465001 RAL-822 2330 chr3R 30480497 30480510 chr3R 30482941 30482990 jockey 8 2485 4.0 4.5 4.2 1.5 2493 chr3R 30480497 intron PH4alphaEFB + chr3R 30481744 intron PH4alphaEFB + chr3R 30482990 intron PH4alphaEFB + chr3R_8_30480001 chr3R_30480001 RAL-822 2331 chr3R 30485026 30485068 chr3R 30485131 30485179 12 106 7.0 0.5 3.8 2.5 153 chr3R 30485026 intron PH4alphaEFB + chr3R 30485102 intron PH4alphaEFB + chr3R 30485179 intron PH4alphaEFB + chr3R_12_30485001 chr3R_30485001 RAL-822 2332 chr3R 30548984 30549037 chr3R 30549111 30549164 13 120 2.5 3.5 3.0 3.2 180 chr3R 30548984 intron tmod + chr3R 30549074 intron tmod + chr3R 30549164 intron tmod + chr3R_13_30545001 chr3R_30545001 RAL-822 2333 chr3R 30571680 30571696 chr3R 30571787 30571811 4 109 5.0 2.5 3.8 0.8 131 chr3R 30571680 intron tmod + chr3R 30571746 intron tmod + chr3R 30571811 exon tmod + chr3R_4_30570001 chr3R_30570001 RAL-822 2334 chr3R 30591280 30591339 chr3R 30591424 30591475 4 140 2.0 4.0 3.0 1.0 195 chr3R 30591280 intergenic not near genes chr3R 30591378 intergenic not near genes chr3R 30591475 intergenic not near genes chr3R_4_30590001 chr3R_30590001 RAL-822 2335 chr3R 30602705 30602762 chr3R 30602957 30603003 20 251 3.0 4.5 3.8 4.2 298 chr3R 30602705 exon CG31021 + chr3R 30602854 exon CG31021 + chr3R 30603003 intron CG31021 + chr3R_20_30600001 chr3R_30600001 RAL-822 2336 chr3R 30620905 30620946 chr3R 30621084 30621104 10 174 0.5 5.0 2.8 2.6 199 chr3R 30620905 intron CG44954 - chr3R 30621004 intron CG44954 - chr3R 30621104 intron CG44954 - chr3R_10_30620001 chr3R_30620001 RAL-822 2337 chr3R 30627624 30627637 chr3R 30627685 30627720 5 74 5.5 3.0 4.2 1.0 96 chr3R 30627624 exon CG2267 - chr3R 30627672 exon CG2267 - chr3R 30627720 exon CG2267 - chr3R_5_30625001 chr3R_30625001 RAL-822 2338 chr3R 30679486 30679548 chr3R 30686990 30687040 blood 8 7493 3.0 5.0 4.0 1.6 7554 chr3R 30679486 intergenic not near genes chr3R 30683263 intergenic not near genes chr3R 30687040 intergenic not near genes chr3R_8_30680001 chr3R_30680001 RAL-822 2339 chr3R 30948082 30948107 chr3R 30948265 30948316 6 206 1.5 0.5 1.0 3.0 234 chr3R 30948082 intergenic not near genes chr3R 30948199 intergenic not near genes chr3R 30948316 intergenic not near genes chr3R_6_30945001 chr3R_30945001 RAL-822 2340 chr3R 30973113 30973150 chr3R 30973298 30973322 8 182 4.0 2.0 3.0 2.0 209 chr3R 30973113 intron 5-HT7 - chr3R 30973218 intron 5-HT7 - chr3R 30973322 intron 5-HT7 - chr3R_8_30970001 chr3R_30970001 RAL-822 2341 chr3R 31042077 31042144 chr3R 31042196 31042261 16 117 1.5 2.5 2.0 5.3 184 chr3R 31042077 intron CanA1 + chr3R 31042169 intron CanA1 + chr3R 31042261 intron CanA1 + chr3R_16_31040001 chr3R_31040001 RAL-822 2342 chr3R 31069618 31069661 chr3R 31069746 31069762 7 122 5.5 3.5 4.5 1.3 144 chr3R 31069618 intron Sox100B + chr3R 31069690 intron Sox100B + chr3R 31069762 intron Sox100B + chr3R_7_31065001 chr3R_31065001 RAL-822 2343 chr3R 31074234 31074250 chr3R 31081850 31081883 springer 5 7626 3.5 4.0 3.8 1.0 7649 chr3R 31074234 intron Sox100B + chr3R 31078058 intron Sox100B + chr3R 31081883 intron Sox100B + chr3R_5_31075001 chr3R_31075001 RAL-822 2344 chr3R 31087100 31087132 chr3R 31087611 31087663 9 520 5.0 4.5 4.8 1.6 563 chr3R 31087100 intergenic not near genes chr3R 31087382 intergenic not near genes chr3R 31087663 intergenic not near genes chr3R_9_31085001 chr3R_31085001 RAL-822 2345 chr3R 31137122 31137143 chr3R 31137237 31137248 5 108 7.0 2.5 4.8 0.9 126 chr3R 31137122 intron Gycbeta100B + chr3R 31137185 intron Gycbeta100B + chr3R 31137248 intron Gycbeta100B + chr3R_5_31135001 chr3R_31135001 RAL-822 2346 chr3R 31137153 31137186 chr3R 31137234 31137261 8 95 2.0 2.0 2.0 2.7 108 chr3R 31137153 intron Gycbeta100B + chr3R 31137207 intron Gycbeta100B + chr3R 31137261 intron Gycbeta100B + chr3R_8_31135001 chr3R_31135001 RAL-822 2347 chr3R 31279340 31279408 chr3R 31285563 31285587 diver 5 6201 3.0 3.5 3.2 1.2 6247 chr3R 31279340 intergenic not near genes chr3R 31282464 intergenic not near genes chr3R 31285587 intergenic not near genes chr3R_5_31280001 chr3R_31280001 RAL-822 2348 chr3R 31412695 31412738 chr3R 31412802 31412822 6 112 1.0 2.0 1.5 2.4 127 chr3R 31412695 intron Gprk2 + chr3R 31412758 intron Gprk2 + chr3R 31412822 intron Gprk2 + chr3R_6_31410001 chr3R_31410001 RAL-822 2349 chr3R 31426851 31426862 chr3R 31426978 31426989 4 127 12.0 8.5 10.2 0.4 138 chr3R 31426851 intron Gprk2 + chr3R 31426920 intron Gprk2 + chr3R 31426989 intron Gprk2 + chr3R_4_31425001 chr3R_31425001 RAL-822 2350 chr3R 31426863 31426911 chr3R 31426970 31427028 13 114 5.5 7.0 6.2 1.8 165 chr3R 31426863 intron Gprk2 + chr3R 31426946 intron Gprk2 + chr3R 31427028 intron Gprk2 + chr3R_13_31425001 chr3R_31425001 RAL-822 2351 chr3R 31435345 31435382 chr3R 31435516 31435568 14 179 5.0 3.5 4.2 2.7 223 chr3R 31435345 intron Gprk2 + chr3R 31435456 intron Gprk2 + chr3R 31435568 intron Gprk2 + chr3R_14_31435001 chr3R_31435001 RAL-822 2352 chr3R 31486122 31486182 chr3R 31486233 31486271 10 104 3.5 3.5 3.5 2.2 149 chr3R 31486122 intergenic not near genes chr3R 31486196 intergenic not near genes chr3R 31486271 intergenic not near genes chr3R_10_31485001 chr3R_31485001 RAL-822 2353 chr3R 31610088 31610147 chr3R 31610209 31610268 19 120 3.5 6.5 5.0 3.2 180 chr3R 31610088 intron CycG - chr3R 31610178 intron CycG - chr3R 31610268 intron CycG - chr3R_19_31610001 chr3R_31610001 RAL-822 2354 chr3R 31691536 31691556 chr3R 31696304 31696347 Doc 4 4778 1.0 3.5 2.2 1.2 4811 chr3R 31691536 intergenic not near genes chr3R 31693942 intergenic not near genes chr3R 31696347 intergenic not near genes chr3R_4_31690001 chr3R_31690001 RAL-822 2355 chr3R 31911653 31911694 chr3R 31911774 31911803 4 110 1.5 3.0 2.2 1.2 150 chr3R 31911653 intron heph - chr3R 31911728 intron heph - chr3R 31911803 intron heph - chr3R_4_31910001 chr3R_31910001 RAL-822 2356 chr3R 31911696 31911710 chr3R 31911764 31911800 5 98 1.0 2.5 1.8 1.8 104 chr3R 31911696 intron heph - chr3R 31911748 intron heph - chr3R 31911800 intron heph - chr3R_5_31910001 chr3R_31910001 RAL-822 2357 chr3R 31931165 31931213 chr3R 31931283 31931321 15 112 3.5 4.0 3.8 3.1 156 chr3R 31931165 intron heph - chr3R 31931243 intron heph - chr3R 31931321 intron heph - chr3R_15_31930001 chr3R_31930001 RAL-822 2358 chr3R 31946020 31946038 chr3R 31946109 31946127 4 97 7.5 5.5 6.5 0.5 107 chr3R 31946020 intron heph - chr3R 31946074 intron heph - chr3R 31946127 intron heph - chr3R_4_31945001 chr3R_31945001 RAL-822 2359 chr3R 31953997 31954030 chr3R 31954108 31954131 7 106 6.5 2.0 4.2 1.3 134 chr3R 31953997 intron heph - chr3R 31954064 intron heph - chr3R 31954131 intron heph - chr3R_7_31950001 chr3R_31950001 RAL-822 2360 chr3R 31954435 31954440 chr3R 31954516 31954526 7 92 2.5 2.0 2.2 2.2 91 chr3R 31954435 intron heph - chr3R 31954480 intron heph - chr3R 31954526 intron heph - chr3R_7_31950001 chr3R_31950001 RAL-822 2361 chr3R 31957959 31957969 chr3R 31958066 31958086 4 112 1.5 5.0 3.2 1.0 127 chr3R 31957959 intron heph - chr3R 31958022 intron heph - chr3R 31958086 intron heph - chr3R_4_31955001 chr3R_31955001 RAL-822 2362 chr3R 31957973 31958006 chr3R 31958065 31958123 5 109 1.5 5.0 3.2 1.2 150 chr3R 31957973 intron heph - chr3R 31958048 intron heph - chr3R 31958123 intron heph - chr3R_5_31955001 chr3R_31955001 RAL-822 2363 chr3R 31975027 31975062 chr3R 31975142 31975188 9 119 2.0 3.0 2.5 2.6 161 chr3R 31975027 intron heph - chr3R 31975108 intron heph - chr3R 31975188 intron heph - chr3R_9_31975001 chr3R_31975001 RAL-822 2364 chr3R 31978530 31978577 chr3R 31978749 31978778 7 207 2.5 0.5 1.5 2.8 248 chr3R 31978530 intron,intron heph -,CG2003 + chr3R 31978654 intron,intron heph -,CG2003 + chr3R 31978778 intron,intron heph -,CG2003 + chr3R_7_31975001 chr3R_31975001 RAL-822 2365 chr3R 31997979 31998021 chr3R 32005463 32005520 blood 18 7498 2.5 4.5 3.5 4.0 7541 chr3R 31997979 intron heph - chr3R 32001750 intron heph - chr3R 32005520 intron heph - chr3R_18_32000001 chr3R_32000001 RAL-822 2366 chr4 76467 76504 chr4 81945 81955 I-element 8 5467 8.0 6.0 7.0 1.0 5488 chr4 76467 intron pan + chr4 79211 intron pan + chr4 81955 intron pan + chr4_8_75001 chr4_75001 RAL-822 2367 chr4 319965 320017 chr4 328171 328218 Stalker2 13 8205 8.0 5.5 6.8 1.7 8253 chr4 319965 3` UTR CG32850 + chr4 324092 intron CG32850 + chr4 328218 3` UTR,3` UTR CG32850 +,PMCA - chr4_13_320001 chr4_320001 RAL-822 2368 chr4 671589 671637 chr4 680187 680218 Tirant 16 8605 4.5 11.0 7.8 1.8 8629 chr4 671589 intron CG11360 + chr4 675904 intron CG11360 + chr4 680218 intron CG11360 + chr4_16_675001 chr4_675001 RAL-822 2369 chr4 972471 972523 chr4 972588 972640 11 113 3.5 6.0 4.8 1.9 169 chr4 972471 intron fuss - chr4 972556 intron fuss - chr4 972640 intron fuss - chr4_11_970001 chr4_970001 RAL-822 2370 chrX 295825 295871 chrX 303480 303526 412 4 7651 3.5 5.0 4.2 0.8 7701 chrX 295825 intron CG3777 + chrX 299676 intron CG3777 + chrX 303526 intron CG3777 + chrX_4_295001 chrX_295001 RAL-822 2371 chrX 318454 318497 chrX 323560 323607 flea 19 5108 5.5 5.5 5.5 2.9 5153 chrX 318454 intron,intron CG3777 +,CG32816 - chrX 321030 intron,intron CG3777 +,CG32816 - chrX 323607 intron,intron CG3777 +,CG32816 - chrX_19_320001 chrX_320001 RAL-822 2372 chrX 428390 428403 chrX 434610 434618 3S18 5 6219 6.5 5.0 5.8 0.7 6228 chrX 428390 intron CG32816 - chrX 431504 intron CG32816 - chrX 434618 intron CG32816 - chrX_5_430001 chrX_430001 RAL-822 2373 chrX 428410 428444 chrX 434604 434649 3S18 10 6207 4.0 3.5 3.8 2.1 6239 chrX 428410 intron CG32816 - chrX 431530 intron CG32816 - chrX 434649 intron CG32816 - chrX_10_430001 chrX_430001 RAL-822 2374 chrX 440415 440480 chrX 440527 440556 14 92 4.5 4.5 4.5 2.5 141 chrX 440415 intron CG32816 - chrX 440486 intron CG32816 - chrX 440556 intron CG32816 - chrX_14_440001 chrX_440001 RAL-822 2375 chrX 494571 494626 chrX 494698 494753 9 123 5.5 4.0 4.8 1.6 182 chrX 494571 intergenic CG17778 + chrX 494662 5` UTR CG17778 + chrX 494753 intron CG17778 + chrX_9_490001 chrX_490001 RAL-822 2376 chrX 576399 576437 chrX 576515 576543 8 105 4.5 2.5 3.5 1.8 144 chrX 576399 3` UTR Appl + chrX 576471 3` UTR Appl + chrX 576543 3` UTR Appl + chrX_8_575001 chrX_575001 RAL-822 2377 chrX 667617 667682 chrX 667736 667765 12 113 3.0 2.0 2.5 3.4 148 chrX 667617 intergenic not near genes chrX 667691 intergenic not near genes chrX 667765 intergenic not near genes chrX_12_665001 chrX_665001 RAL-822 2378 chrX 699476 699512 chrX 699986 700038 INE-1 6 523 4.5 6.5 5.5 0.9 562 chrX 699476 intron sdk + chrX 699757 intron sdk + chrX 700038 intron sdk + chrX_6_695001 chrX_695001 RAL-822 2379 chrX 718303 718349 chrX 718418 718464 4 108 0.5 3.0 1.8 1.4 161 chrX 718303 intron sdk + chrX 718384 intron sdk + chrX 718464 intron sdk + chrX_4_715001 chrX_715001 RAL-822 2380 chrX 718352 718358 chrX 718412 718459 4 93 0.5 2.5 1.5 1.6 107 chrX 718352 intron sdk + chrX 718406 intron sdk + chrX 718459 intron sdk + chrX_4_715001 chrX_715001 RAL-822 2381 chrX 778108 778160 chrX 778221 778256 5 110 3.0 1.0 2.0 1.7 148 chrX 778108 intron fz3 + chrX 778182 intron fz3 + chrX 778256 intron fz3 + chrX_5_775001 chrX_775001 RAL-822 2382 chrX 806754 806817 chrX 806882 806917 7 117 3.5 3.0 3.2 1.7 163 chrX 806754 intron Sec22 + chrX 806836 intron Sec22 + chrX 806917 intron Sec22 + chrX_7_805001 chrX_805001 RAL-822 2383 chrX 812238 812297 chrX 817897 817939 297 9 5651 2.5 5.0 3.8 1.9 5701 chrX 812238 intron CG43867 - chrX 815088 intron CG43867 - chrX 817939 intron CG43867 - chrX_9_815001 chrX_815001 RAL-822 2384 chrX 827589 827626 chrX 835393 835445 roo 5 7810 1.5 0.0 0.8 2.8 7856 chrX 827589 intron CG43867 - chrX 831517 intron CG43867 - chrX 835445 intron CG43867 - chrX_5_830001 chrX_830001 RAL-822 2385 chrX 868489 868515 chrX 868574 868591 4 85 2.5 1.5 2.0 1.3 102 chrX 868489 intron CG43867 - chrX 868540 intron CG43867 - chrX 868591 intron CG43867 - chrX_4_865001 chrX_865001 RAL-822 2386 chrX 906672 906716 chrX 908492 908517 S-element 6 1808 1.0 8.0 4.5 1.1 1845 chrX 906672 intron CG43867 - chrX 907594 intron CG43867 - chrX 908517 intron CG43867 - chrX_6_905001 chrX_905001 RAL-822 2387 chrX 998430 998485 chrX 999087 999142 12 653 3.5 4.5 4.0 2.4 712 chrX 998430 intergenic not near genes chrX 998786 intergenic not near genes chrX 999142 intergenic not near genes chrX_12_995001 chrX_995001 RAL-822 2388 chrX 1063738 1063751 chrX 1072556 1072579 roo 5 8824 7.5 4.5 6.0 0.7 8841 chrX 1063738 intron CR44779 + chrX 1068158 intron CR44779 + chrX 1072579 intron CR44779 + chrX_5_1065001 chrX_1065001 RAL-822 2389 chrX 1253733 1253763 chrX 1253815 1253873 10 101 2.0 3.5 2.8 2.6 140 chrX 1253733 intron Atf3 - chrX 1253803 intron Atf3 - chrX 1253873 intron Atf3 - chrX_10_1250001 chrX_1250001 RAL-822 2390 chrX 1357762 1357802 chrX 1367952 1367998 Doc 13 10194 3.5 5.5 4.5 2.4 10236 chrX 1357762 intergenic png - chrX 1362880 intergenic not near genes chrX 1367998 intergenic not near genes chrX_13_1360001 chrX_1360001 RAL-822 2391 chrX 1559882 1559948 chrX 1560001 1560067 7 116 4.0 1.0 2.5 2.0 185 chrX 1559882 intron Mur2B - chrX 1559974 intron Mur2B - chrX 1560067 intron Mur2B - chrX_7_1555001 chrX_1555001 RAL-822 2392 chrX 1651624 1651650 chrX 1651739 1651766 4 110 8.0 4.0 6.0 0.6 142 chrX 1651624 intron Mur2B - chrX 1651695 intron Mur2B - chrX 1651766 intron Mur2B - chrX_4_1650001 chrX_1650001 RAL-822 2393 chrX 1930519 1930567 chrX 1938107 1938156 opus 10 7595 4.5 4.0 4.2 1.9 7637 chrX 1930519 intergenic CG11596 + chrX 1934338 intergenic not near genes chrX 1938156 3` UTR CG3857 - chrX_10_1930001 chrX_1930001 RAL-822 2394 chrX 2045024 2045038 chrX 2045091 2045150 7 101 1.0 2.5 1.8 2.5 126 chrX 2045024 intron,3` UTR CG4313 +,moody - chrX 2045087 intron,3` UTR CG4313 +,moody - chrX 2045150 intron,exon CG4313 +,moody - chrX_7_2045001 chrX_2045001 RAL-822 2395 chrX 2050535 2050582 chrX 2050649 2050657 4 93 1.5 2.0 1.8 1.4 122 chrX 2050535 intron CG4313 + chrX 2050596 intron CG4313 + chrX 2050657 intron CG4313 + chrX_4_2050001 chrX_2050001 RAL-822 2396 chrX 2086936 2086966 chrX 2087295 2087310 4 356 2.0 3.0 2.5 1.1 374 chrX 2086936 intron Unc-76 + chrX 2087123 intron Unc-76 + chrX 2087310 intron Unc-76 + chrX_4_2085001 chrX_2085001 RAL-822 2397 chrX 2146629 2146686 chrX 2146751 2146778 6 106 2.5 3.0 2.8 1.6 149 chrX 2146629 intron Pgd + chrX 2146704 intron Pgd + chrX 2146778 intron Pgd + chrX_6_2145001 chrX_2145001 RAL-822 2398 chrX 2399858 2399871 chrX 2408196 2408226 roo 5 8352 2.5 3.5 3.0 1.2 8368 chrX 2399858 intergenic not near genes chrX 2404042 intergenic not near genes chrX 2408226 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-822 2399 chrX 2429656 2429663 chrX 2429758 2429772 4 111 0.0 6.5 3.2 1.0 116 chrX 2429656 intergenic not near genes chrX 2429714 intergenic not near genes chrX 2429772 intergenic not near genes chrX_4_2425001 chrX_2425001 RAL-822 2400 chrX 2578795 2578843 chrX 2578904 2578945 7 110 4.0 3.0 3.5 1.6 150 chrX 2578795 intergenic Pdfr +,Vha36-3 - chrX 2578870 intergenic Vha36-3 -,Pdfr + chrX 2578945 intergenic Vha36-3 -,Pdfr + chrX_7_2575001 chrX_2575001 RAL-822 2401 chrX 2635353 2635401 chrX 2635483 2635543 10 130 2.5 5.0 3.8 2.1 190 chrX 2635353 intron sgg + chrX 2635448 intron sgg + chrX 2635543 intron sgg + chrX_10_2635001 chrX_2635001 RAL-822 2402 chrX 2635972 2636016 chrX 2636525 2636580 12 552 5.5 1.0 3.2 2.9 608 chrX 2635972 intron sgg + chrX 2636276 intron sgg + chrX 2636580 intron sgg + chrX_12_2635001 chrX_2635001 RAL-822 2403 chrX 2664355 2664413 chrX 2665536 2665570 1360 5 1175 6.5 7.5 7.0 0.6 1215 chrX 2664355 intron sgg + chrX 2664962 intron sgg + chrX 2665570 intron sgg + chrX_5_2660001 chrX_2660001 RAL-822 2404 chrX 2803468 2803525 chrX 2803644 2803668 11 163 2.0 0.0 1.0 5.5 200 chrX 2803468 intron kirre + chrX 2803568 intron kirre + chrX 2803668 intron kirre + chrX_11_2800001 chrX_2800001 RAL-822 2405 chrX 2844871 2844924 chrX 2852315 2852368 mdg1 7 7440 2.5 5.5 4.0 1.4 7497 chrX 2844871 intron kirre + chrX 2848620 intron kirre + chrX 2852368 intron kirre + chrX_7_2845001 chrX_2845001 RAL-822 2406 chrX 2859345 2859377 chrX 2860052 2860082 8 706 12.5 31.0 21.8 0.4 737 chrX 2859345 intron kirre + chrX 2859714 intron kirre + chrX 2860082 intron kirre + chrX_8_2855001 chrX_2855001 RAL-822 2407 chrX 2903494 2903524 chrX 2903738 2903780 7 255 1.0 1.0 1.0 3.5 286 chrX 2903494 intron kirre + chrX 2903637 intron kirre + chrX 2903780 intron kirre + chrX_7_2900001 chrX_2900001 RAL-822 2408 chrX 3031148 3031188 chrX 3031244 3031306 7 105 2.5 1.5 2.0 2.3 158 chrX 3031148 intron kirre + chrX 3031227 intron kirre + chrX 3031306 intron kirre + chrX_7_3030001 chrX_3030001 RAL-822 2409 chrX 3058004 3058049 chrX 3058280 3058323 pogo 7 272 5.0 3.5 4.2 1.3 319 chrX 3058004 intron kirre + chrX 3058164 intron kirre + chrX 3058323 intron kirre + chrX_7_3055001 chrX_3055001 RAL-822 2410 chrX 3075600 3075642 chrX 3080946 3080974 Transpac 4 5342 1.0 1.0 1.0 2.0 5374 chrX 3075600 intron kirre + chrX 3078287 intron kirre + chrX 3080974 intron kirre + chrX_4_3075001 chrX_3075001 RAL-822 2411 chrX 3107730 3107775 chrX 3107854 3107866 9 117 1.5 3.5 2.5 2.6 136 chrX 3107730 intron kirre + chrX 3107798 intron kirre + chrX 3107866 intron kirre + chrX_9_3105001 chrX_3105001 RAL-822 2412 chrX 3109422 3109465 chrX 3109534 3109556 9 109 3.5 0.5 2.0 3.0 134 chrX 3109422 intron kirre + chrX 3109489 intron kirre + chrX 3109556 intron kirre + chrX_9_3105001 chrX_3105001 RAL-822 2413 chrX 3218492 3218514 chrX 3227666 3227689 roo 6 9178 0.5 3.5 2.0 2.0 9197 chrX 3218492 intron dnc + chrX 3223090 intron dnc + chrX 3227689 intron dnc + chrX_6_3220001 chrX_3220001 RAL-822 2414 chrX 3243614 3243649 chrX 3243726 3243774 9 115 3.5 5.5 4.5 1.6 160 chrX 3243614 intron dnc + chrX 3243694 intron dnc + chrX 3243774 intron dnc + chrX_9_3240001 chrX_3240001 RAL-822 2415 chrX 3252421 3252437 chrX 3252527 3252538 7 107 2.5 0.0 1.2 3.2 117 chrX 3252421 intron dnc + chrX 3252480 intron dnc + chrX 3252538 intron dnc + chrX_7_3250001 chrX_3250001 RAL-822 2416 chrX 3268069 3268094 chrX 3268336 3268349 5 267 4.0 1.0 2.5 1.4 280 chrX 3268069 intron dnc + chrX 3268209 intron dnc + chrX 3268349 intron dnc + chrX_5_3265001 chrX_3265001 RAL-822 2417 chrX 3306314 3306374 chrX 3306426 3306490 8 113 3.0 0.0 1.5 3.2 176 chrX 3306314 intron dnc + chrX 3306402 intron dnc + chrX 3306490 intron dnc + chrX_8_3305001 chrX_3305001 RAL-822 2418 chrX 3398131 3398159 chrX 3398246 3398271 8 110 3.5 10.5 7.0 1.0 140 chrX 3398131 intron,intron CR44999 +,CG12535 - chrX 3398201 intron,intron CR44999 +,CG12535 - chrX 3398271 intron,intron CR44999 +,CG12535 - chrX_8_3395001 chrX_3395001 RAL-822 2419 chrX 3408972 3409011 chrX 3409083 3409106 11 106 2.0 4.0 3.0 2.8 134 chrX 3408972 intron,intron CR44999 +,CG12535 - chrX 3409039 intron,intron CR44999 +,CG12535 - chrX 3409106 intron,intron CR44999 +,CG12535 - chrX_11_3405001 chrX_3405001 RAL-822 2420 chrX 3414334 3414361 chrX 3414470 3414512 6 147 0.5 1.0 0.8 3.3 178 chrX 3414334 intron,intron CR44999 +,CG12535 - chrX 3414423 intron,intron CR44999 +,CG12535 - chrX 3414512 intron,intron CR44999 +,CG12535 - chrX_6_3410001 chrX_3410001 RAL-822 2421 chrX 3415030 3415032 chrX 3421210 3421237 3S18 4 6205 1.5 5.0 3.2 1.0 6207 chrX 3415030 intron,intron CR44999 +,CG12535 - chrX 3418134 intron,intron CR44999 +,CG12535 - chrX 3421237 intron,intron CR44999 +,CG12535 - chrX_4_3415001 chrX_3415001 RAL-822 2422 chrX 3493075 3493112 chrX 3502252 3502281 roo 5 9170 1.5 2.0 1.8 1.8 9206 chrX 3493075 intron,intron CR44999 +,Gas8 - chrX 3497678 intron,intron CR44999 +,Gas8 - chrX 3502281 intron,intron CR44999 +,Gas8 - chrX_5_3495001 chrX_3495001 RAL-822 2423 chrX 3513762 3513769 chrX 3513846 3513887 7 109 3.5 6.0 4.8 1.2 125 chrX 3513762 intron,intron CR44999 +,CG32791 - chrX 3513824 intron,intron CR44999 +,CG32791 - chrX 3513887 intron,intron CR44999 +,CG32791 - chrX_7_3510001 chrX_3510001 RAL-822 2424 chrX 3535392 3535421 chrX 3535520 3535544 4 126 1.5 5.0 3.2 1.0 152 chrX 3535392 intron CG32791 - chrX 3535468 intron CG32791 - chrX 3535544 intron CG32791 - chrX_4_3535001 chrX_3535001 RAL-822 2425 chrX 3535425 3535433 chrX 3535518 3535559 5 115 1.0 4.5 2.8 1.3 134 chrX 3535425 intron CG32791 - chrX 3535492 intron CG32791 - chrX 3535559 intron CG32791 - chrX_5_3535001 chrX_3535001 RAL-822 2426 chrX 3597535 3597581 chrX 3619738 3619774 roo 7 22192 4.5 3.5 4.0 1.4 22239 chrX 3597535 intron AstA-R1 + chrX 3608654 intron AstA-R1 + chrX 3619774 intron AstA-R1 + chrX_7_3605001 chrX_3605001 RAL-822 2427 chrX 3649458 3649482 chrX 3649602 3649636 5 146 5.5 2.5 4.0 1.0 178 chrX 3649458 intron AstA-R1 + chrX 3649547 intron AstA-R1 + chrX 3649636 intron AstA-R1 + chrX_5_3645001 chrX_3645001 RAL-822 2428 chrX 3662480 3662487 chrX 3662582 3662587 4 109 8.0 1.0 4.5 0.7 107 chrX 3662480 intron AstA-R1 + chrX 3662534 intron AstA-R1 + chrX 3662587 intron AstA-R1 + chrX_4_3660001 chrX_3660001 RAL-822 2429 chrX 3840239 3840249 chrX 3840343 3840355 6 108 9.5 4.0 6.8 0.8 116 chrX 3840239 intron ec + chrX 3840297 intron ec + chrX 3840355 intron ec + chrX_6_3840001 chrX_3840001 RAL-822 2430 chrX 3842298 3842349 chrX 3842574 3842595 pogo 4 264 1.0 4.0 2.5 1.1 297 chrX 3842298 intron ec + chrX 3842446 intron ec + chrX 3842595 intron ec + chrX_4_3840001 chrX_3840001 RAL-822 2431 chrX 3862793 3862830 chrX 3862908 3862949 8 112 4.0 2.5 3.2 1.9 156 chrX 3862793 intergenic yin - chrX 3862871 intergenic yin - chrX 3862949 intergenic yin - chrX_8_3860001 chrX_3860001 RAL-822 2432 chrX 3866081 3866127 chrX 3866194 3866215 16 104 4.5 1.5 3.0 4.0 134 chrX 3866081 intron yin - chrX 3866148 intron yin - chrX 3866215 intron yin - chrX_16_3865001 chrX_3865001 RAL-822 2433 chrX 3880438 3880487 chrX 3880544 3880608 7 117 3.0 4.0 3.5 1.6 170 chrX 3880438 intergenic VhaAC39-1 + chrX 3880523 intergenic VhaAC39-1 + chrX 3880608 intergenic VhaAC39-1 + chrX_7_3880001 chrX_3880001 RAL-822 2434 chrX 3881254 3881299 chrX 3881415 3881472 7 166 2.0 2.5 2.2 2.2 218 chrX 3881254 intron VhaAC39-1 + chrX 3881363 intron VhaAC39-1 + chrX 3881472 exon VhaAC39-1 + chrX_7_3880001 chrX_3880001 RAL-822 2435 chrX 3915506 3915552 chrX 3915609 3915662 7 112 0.0 6.5 3.2 1.7 156 chrX 3915506 intron CG42541 - chrX 3915584 intron CG42541 - chrX 3915662 intron CG42541 - chrX_7_3915001 chrX_3915001 RAL-822 2436 chrX 3950778 3950825 chrX 3950883 3950925 15 112 5.5 3.5 4.5 2.7 147 chrX 3950778 intron Vap-33A + chrX 3950852 intron Vap-33A + chrX 3950925 intron Vap-33A + chrX_15_3950001 chrX_3950001 RAL-822 2437 chrX 3986839 3986889 chrX 3994498 3994557 412 10 7659 2.5 2.5 2.5 2.9 7718 chrX 3986839 intergenic not near genes chrX 3990698 intergenic not near genes chrX 3994557 intergenic not near genes chrX_10_3990001 chrX_3990001 RAL-822 2438 chrX 4029510 4029553 chrX 4029718 4029771 5 212 3.5 2.5 3.0 1.2 261 chrX 4029510 intergenic not near genes chrX 4029640 intergenic not near genes chrX 4029771 intergenic not near genes chrX_5_4025001 chrX_4025001 RAL-822 2439 chrX 4101852 4101899 chrX 4101945 4101971 12 98 3.0 2.5 2.8 3.2 119 chrX 4101852 exon CG15375 + chrX 4101912 exon CG15375 + chrX 4101971 exon CG15375 + chrX_12_4100001 chrX_4100001 RAL-822 2440 chrX 4132635 4132698 chrX 4132837 4132891 11 194 2.5 3.5 3.0 2.8 256 chrX 4132635 3` UTR GlcAT-I + chrX 4132763 3` UTR GlcAT-I + chrX 4132891 3` UTR Fas2 - chrX_11_4130001 chrX_4130001 RAL-822 2441 chrX 4157875 4157921 chrX 4164952 4164978 297 5 7067 1.5 1.0 1.2 2.3 7103 chrX 4157875 intron Fas2 - chrX 4161426 intron Fas2 - chrX 4164978 intron Fas2 - chrX_5_4160001 chrX_4160001 RAL-822 2442 chrX 4203487 4203543 chrX 4203597 4203658 10 113 1.5 2.5 2.0 3.3 171 chrX 4203487 intron Fas2 - chrX 4203572 intron Fas2 - chrX 4203658 intron Fas2 - chrX_10_4200001 chrX_4200001 RAL-822 2443 chrX 4209899 4209956 chrX 4210024 4210048 6 118 0.0 1.5 0.8 3.3 149 chrX 4209899 intergenic not near genes chrX 4209974 intergenic not near genes chrX 4210048 intergenic not near genes chrX_6_4205001 chrX_4205001 RAL-822 2444 chrX 4229956 4229966 chrX 4230107 4230117 4 148 2.5 1.5 2.0 1.3 161 chrX 4229956 intergenic not near genes chrX 4230036 intergenic not near genes chrX 4230117 intergenic not near genes chrX_4_4230001 chrX_4230001 RAL-822 2445 chrX 4324365 4324415 chrX 4324470 4324527 13 106 2.0 4.5 3.2 3.1 162 chrX 4324365 intron norpA + chrX 4324446 intron norpA + chrX 4324527 intron norpA + chrX_13_4320001 chrX_4320001 RAL-822 2446 chrX 3765229 3765271 chrX 4343745 4343751 5 578488 20.0 9.0 14.5 0.3 578522 chrX 3765229 intron tlk + chrX 4054490 intergenic not near genes chrX 4343751 intron norpA + chrX_5_4050001 chrX_4050001 RAL-822 2447 chrX 4361414 4361461 chrX 4361528 4361530 9 101 2.5 4.0 3.2 2.1 116 chrX 4361414 intron norpA + chrX 4361472 intron norpA + chrX 4361530 intron norpA + chrX_9_4360001 chrX_4360001 RAL-822 2448 chrX 4383113 4383142 chrX 4383194 4383240 9 102 2.5 3.0 2.8 2.4 127 chrX 4383113 intergenic not near genes chrX 4383176 intergenic not near genes chrX 4383240 intergenic not near genes chrX_9_4380001 chrX_4380001 RAL-822 2449 chrX 4388269 4388292 chrX 4388442 4388465 6 172 1.5 4.0 2.8 1.6 196 chrX 4388269 intron CR32773 - chrX 4388367 intron CR32773 - chrX 4388465 intron CR32773 - chrX_6_4385001 chrX_4385001 RAL-822 2450 chrX 4389377 4389377 chrX 12946234 12946235 4 8556858 19.0 18.5 18.8 0.2 8556858 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_4_8665001 chrX_8665001 RAL-822 2451 chrX 4525735 4525770 chrX 4525847 4525882 7 114 3.0 2.5 2.8 1.8 147 chrX 4525735 intron CR32773 - chrX 4525808 intron CR32773 - chrX 4525882 intron CR32773 - chrX_7_4525001 chrX_4525001 RAL-822 2452 chrX 4693772 4693782 chrX 4693845 4693912 7 109 0.0 1.0 0.5 4.7 140 chrX 4693772 intron ctp + chrX 4693842 intron ctp + chrX 4693912 intron ctp + chrX_7_4690001 chrX_4690001 RAL-822 2453 chrX 4700352 4700426 chrX 4700733 4700794 jockey 12 373 2.5 6.0 4.2 2.3 442 chrX 4700352 3` UTR ctp + chrX 4700573 3` UTR ctp + chrX 4700794 3` UTR ctp + chrX_12_4700001 chrX_4700001 RAL-822 2454 chrX 4744135 4744170 chrX 4744255 4744298 8 130 3.0 0.5 1.8 2.9 163 chrX 4744135 intergenic not near genes chrX 4744216 intergenic not near genes chrX 4744298 intergenic not near genes chrX_8_4740001 chrX_4740001 RAL-822 2455 chrX 1562990 1562990 chrX 4805476 4805477 opus 4 3242486 9.5 4.5 7.0 0.5 3242487 chrX 1562990 intron Mur2B - chrX 3184234 intron dnc + chrX 4805477 3` UTR CR45516 - chrX_4_3180001 chrX_3180001 RAL-822 2456 chrX 4815027 4815325 chrX 4815165 4815435 4 125 5.0 9.0 7.0 0.5 408 chrX 4815027 intergenic not near genes chrX 4815231 intergenic not near genes chrX 4815435 intergenic not near genes chrX_4_4815001 chrX_4815001 RAL-822 2457 chrX 4827651 4827669 chrX 4827732 4827748 5 97 4.5 1.0 2.8 1.3 97 chrX 4827651 intergenic not near genes chrX 4827700 intergenic not near genes chrX 4827748 intergenic not near genes chrX_5_4825001 chrX_4825001 RAL-822 2458 chrX 4827967 4827996 chrX 4835338 4835348 Stalker4 5 7379 3.5 2.0 2.8 1.3 7381 chrX 4827967 intergenic not near genes chrX 4831658 intergenic not near genes chrX 4835348 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-822 2459 chrX 5096267 5096280 chrX 5103851 5103880 springer 6 7596 1.5 6.0 3.8 1.2 7613 chrX 5096267 intron,intron CG15465 +,rg + chrX 5100074 intron,intron CG15465 +,rg + chrX 5103880 intron,intron CG15465 +,rg + chrX_6_5100001 chrX_5100001 RAL-822 2460 chrX 5122785 5122803 chrX 5123049 5123062 4 262 11.0 0.0 5.5 0.6 277 chrX 5122785 intron,intron CG15465 +,rg + chrX 5122924 intron,intron CG15465 +,rg + chrX 5123062 intron,intron CG15465 +,rg + chrX_4_5120001 chrX_5120001 RAL-822 2461 chrX 5134809 5134826 chrX 5134945 5134951 5 132 3.0 10.5 6.8 0.6 142 chrX 5134809 intron,intron CG15465 +,rg + chrX 5134880 intron,intron CG15465 +,rg + chrX 5134951 intron,intron CG15465 +,rg + chrX_5_5130001 chrX_5130001 RAL-822 2462 chrX 5206301 5206306 chrX 5206588 5206608 4 297 1.5 2.0 1.8 1.4 307 chrX 5206301 intron,intron CG15465 +,rg + chrX 5206454 intron,intron CG15465 +,rg + chrX 5206608 intron,intron CG15465 +,rg + chrX_4_5205001 chrX_5205001 RAL-822 2463 chrX 5206311 5206333 chrX 5206574 5206630 8 269 0.5 0.5 0.5 5.3 319 chrX 5206311 intron,intron CG15465 +,rg + chrX 5206470 intron,intron CG15465 +,rg + chrX 5206630 intron,intron CG15465 +,rg + chrX_8_5205001 chrX_5205001 RAL-822 2464 chrX 5345389 5345422 chrX 5345525 5345558 7 129 2.0 3.0 2.5 2.0 169 chrX 5345389 intron SK + chrX 5345474 intron SK + chrX 5345558 intron SK + chrX_7_5345001 chrX_5345001 RAL-822 2465 chrX 5473575 5473616 chrX 5473669 5473710 7 85 3.0 5.5 4.2 1.3 135 chrX 5473575 intron SPR + chrX 5473642 intron SPR + chrX 5473710 intron SPR + chrX_7_5470001 chrX_5470001 RAL-822 2466 chrX 5480506 5480563 chrX 5480619 5480665 6 96 5.0 5.0 5.0 1.0 159 chrX 5480506 intron SPR + chrX 5480586 intron SPR + chrX 5480665 intron SPR + chrX_6_5480001 chrX_5480001 RAL-822 2467 chrX 5487503 5487519 chrX 5487766 5487810 4 279 8.0 8.5 8.2 0.4 307 chrX 5487503 intron SPR + chrX 5487656 intron SPR + chrX 5487810 intron SPR + chrX_4_5485001 chrX_5485001 RAL-822 2468 chrX 5509712 5509748 chrX 5509896 5509944 4 190 3.0 2.0 2.5 1.1 232 chrX 5509712 intergenic not near genes chrX 5509828 intergenic not near genes chrX 5509944 intergenic not near genes chrX_4_5505001 chrX_5505001 RAL-822 2469 chrX 5524828 5524843 chrX 5528711 5528741 412 6 3885 9.0 2.5 5.8 0.9 3913 chrX 5524828 intergenic snoRNA:Psi28S-3342 - chrX 5526784 intergenic not near genes chrX 5528741 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 RAL-822 2470 chrX 5524844 5524858 chrX 5528707 5528725 412 4 3874 8.0 2.0 5.0 0.7 3881 chrX 5524844 intergenic snoRNA:Psi28S-3342 - chrX 5526784 intergenic not near genes chrX 5528725 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-822 2471 chrX 5727401 5727413 chrX 5732164 5732176 Doc 6 4768 5.0 2.5 3.8 1.2 4775 chrX 5727401 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732176 intron CG32758 - chrX_6_5725001 chrX_5725001 RAL-822 2472 chrX 5798870 5798883 chrX 5799025 5799069 4 176 0.0 2.0 1.0 2.0 199 chrX 5798870 intergenic not near genes chrX 5798970 intergenic not near genes chrX 5799069 intergenic not near genes chrX_4_5795001 chrX_5795001 RAL-822 2473 chrX 5884148 5884179 chrX 5884404 5884442 pogo 14 269 4.5 4.0 4.2 2.7 294 chrX 5884148 intron CR45668 - chrX 5884295 intron CR45668 - chrX 5884442 intron CR45668 - chrX_14_5880001 chrX_5880001 RAL-822 2474 chrX 5884180 5884187 chrX 5884402 5884458 pogo 8 263 4.0 4.0 4.0 1.6 278 chrX 5884180 intron CR45668 - chrX 5884319 intron CR45668 - chrX 5884458 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-822 2475 chrX 5884995 5885043 chrX 5885313 5885376 12 327 5.5 3.5 4.5 2.2 381 chrX 5884995 intron CR45668 - chrX 5885186 intron CR45668 - chrX 5885376 intron CR45668 - chrX_12_5885001 chrX_5885001 RAL-822 2476 chrX 6080807 6080824 chrX 6080926 6080929 4 114 5.5 3.0 4.2 0.8 122 chrX 6080807 intron CG4660 - chrX 6080868 intron CG4660 - chrX 6080929 intron CG4660 - chrX_4_6080001 chrX_6080001 RAL-822 2477 chrX 6118696 6118722 chrX 6118788 6118804 4 94 5.0 5.0 5.0 0.7 108 chrX 6118696 intron Ca-alpha1T - chrX 6118750 intron Ca-alpha1T - chrX 6118804 intron Ca-alpha1T - chrX_4_6115001 chrX_6115001 RAL-822 2478 chrX 6171584 6171609 chrX 6179016 6179067 Quasimodo 8 7455 3.5 4.0 3.8 1.7 7483 chrX 6171584 intron Ca-alpha1T - chrX 6175326 intron Ca-alpha1T - chrX 6179067 intron Ca-alpha1T - chrX_8_6175001 chrX_6175001 RAL-822 2479 chrX 6306541 6306554 chrX 6306630 6306653 7 98 5.0 1.0 3.0 1.8 112 chrX 6306541 3` UTR CG3823 + chrX 6306597 3` UTR CG3823 + chrX 6306653 3` UTR CG3823 + chrX_7_6305001 chrX_6305001 RAL-822 2480 chrX 6306555 6306572 chrX 6306628 6306648 6 76 3.0 1.0 2.0 2.0 93 chrX 6306555 3` UTR CG3823 + chrX 6306602 3` UTR CG3823 + chrX 6306648 3` UTR CG3823 + chrX_6_6305001 chrX_6305001 RAL-822 2481 chrX 6312172 6312178 chrX 6312280 6312280 6 109 8.5 4.0 6.2 0.8 108 chrX 6312172 intron CG15894 + chrX 6312226 intron CG15894 + chrX 6312280 intron CG15894 + chrX_6_6310001 chrX_6310001 RAL-822 2482 chrX 6312179 6312209 chrX 6312279 6312291 5 103 5.5 4.0 4.8 0.9 112 chrX 6312179 intron CG15894 + chrX 6312235 intron CG15894 + chrX 6312291 intron CG15894 + chrX_5_6310001 chrX_6310001 RAL-822 2483 chrX 6315142 6315188 chrX 6315298 6315325 6 154 5.5 8.5 7.0 0.8 183 chrX 6315142 intron CG15894 + chrX 6315234 intron CG15894 + chrX 6315325 intron CG15894 + chrX_6_6315001 chrX_6315001 RAL-822 2484 chrX 6335228 6335237 chrX 6337732 6337767 Tirant 5 2534 0.0 3.5 1.8 1.8 2539 chrX 6335228 intergenic not near genes chrX 6336498 intergenic not near genes chrX 6337767 5` UTR CG3842 + chrX_5_6335001 chrX_6335001 RAL-822 2485 chrX 6388640 6388694 chrX 6388750 6388804 13 108 3.5 5.0 4.2 2.5 164 chrX 6388640 intergenic not near genes chrX 6388722 intergenic not near genes chrX 6388804 intergenic not near genes chrX_13_6385001 chrX_6385001 RAL-822 2486 chrX 6415172 6415205 chrX 6415535 6415582 6 367 3.0 4.0 3.5 1.3 410 chrX 6415172 intergenic not near genes chrX 6415377 intergenic not near genes chrX 6415582 intergenic not near genes chrX_6_6415001 chrX_6415001 RAL-822 2487 chrX 6591823 6591870 chrX 6591943 6591968 6 116 3.0 0.0 1.5 2.4 145 chrX 6591823 intron Pat1 + chrX 6591896 intron Pat1 + chrX 6591968 intron Pat1 + chrX_6_6590001 chrX_6590001 RAL-822 2488 chrX 6605468 6605502 chrX 6608515 6608559 Burdock 16 3053 4.0 8.5 6.2 2.2 3091 chrX 6605468 intron pigs + chrX 6607014 intron pigs + chrX 6608559 intron pigs + chrX_16_6605001 chrX_6605001 RAL-822 2489 chrX 6792056 6792090 chrX 6792177 6792196 5 110 0.5 3.0 1.8 1.8 140 chrX 6792056 intron C3G - chrX 6792126 intron C3G - chrX 6792196 intron C3G - chrX_5_6790001 chrX_6790001 RAL-822 2490 chrX 6884771 6884782 chrX 6884926 6884932 4 161 6.5 2.5 4.5 0.7 161 chrX 6884771 intergenic not near genes chrX 6884852 intergenic not near genes chrX 6884932 intergenic not near genes chrX_4_6880001 chrX_6880001 RAL-822 2491 chrX 6897660 6897709 chrX 6897804 6897828 10 135 1.5 2.5 2.0 3.3 168 chrX 6897660 intergenic not near genes chrX 6897744 intergenic not near genes chrX 6897828 intergenic not near genes chrX_10_6895001 chrX_6895001 RAL-822 2492 chrX 6984599 6984652 chrX 6984711 6984748 7 106 4.0 4.0 4.0 1.4 149 chrX 6984599 intron ogre - chrX 6984674 intron ogre - chrX 6984748 intron ogre - chrX_7_6980001 chrX_6980001 RAL-822 2493 chrX 6988500 6988525 chrX 6988620 6988645 5 117 5.5 2.5 4.0 1.0 145 chrX 6988500 intron ogre - chrX 6988572 intron ogre - chrX 6988645 intron ogre - chrX_5_6985001 chrX_6985001 RAL-822 2494 chrX 7023581 7023607 chrX 7031006 7031017 Tabor 5 7415 6.0 4.5 5.2 0.8 7436 chrX 7023581 intron CG12541 - chrX 7027299 intron CG12541 - chrX 7031017 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-822 2495 chrX 7023609 7023633 chrX 7030995 7031037 Tabor 4 7385 4.0 2.0 3.0 1.0 7428 chrX 7023609 intron CG12541 - chrX 7027323 intron CG12541 - chrX 7031037 intron CG12541 - chrX_4_7025001 chrX_7025001 RAL-822 2496 chrX 7125232 7125272 chrX 7134403 7134455 roo 8 9183 0.0 5.5 2.8 2.1 9223 chrX 7125232 intergenic not near genes chrX 7129844 intergenic not near genes chrX 7134455 intergenic not near genes chrX_8_7125001 chrX_7125001 RAL-822 2497 chrX 7235523 7235542 chrX 7235645 7235664 5 122 3.0 1.0 2.0 1.7 141 chrX 7235523 intron,intron CG9650 +,CR44357 - chrX 7235594 intron,intron CG9650 +,CR44357 - chrX 7235664 intron,intron CG9650 +,CR44357 - chrX_5_7235001 chrX_7235001 RAL-822 2498 chrX 7298190 7298197 chrX 7298305 7298327 4 122 1.5 2.0 1.8 1.4 137 chrX 7298190 intron,intron CR44357 -,CG1677 - chrX 7298258 intron,intron CR44357 -,CG1677 - chrX 7298327 intron,intron CR44357 -,CG1677 - chrX_4_7295001 chrX_7295001 RAL-822 2499 chrX 7298988 7299002 chrX 7299106 7299115 5 118 3.0 1.0 2.0 1.7 127 chrX 7298988 intron,intron CR44357 -,CG1677 - chrX 7299052 intron,intron CR44357 -,CG1677 - chrX 7299115 intron,intron CR44357 -,CG1677 - chrX_5_7295001 chrX_7295001 RAL-822 2500 chrX 7345183 7345194 chrX 7345295 7345319 4 116 5.0 3.0 4.0 0.8 136 chrX 7345183 intron,intron CR44357 -,CG1677 - chrX 7345251 intron,intron CR44357 -,CG1677 - chrX 7345319 intron,intron CR44357 -,CG1677 - chrX_4_7345001 chrX_7345001 RAL-822 2501 chrX 7470195 7470218 chrX 7470314 7470336 6 117 4.0 4.0 4.0 1.2 141 chrX 7470195 intergenic not near genes chrX 7470266 intergenic not near genes chrX 7470336 intergenic not near genes chrX_6_7470001 chrX_7470001 RAL-822 2502 chrX 7702876 7702906 chrX 7703350 7703380 jockey 4 468 11.0 8.0 9.5 0.4 504 chrX 7702876 intron CHES-1-like - chrX 7703128 intron CHES-1-like - chrX 7703380 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-822 2503 chrX 7702909 7702931 chrX 7703337 7703374 jockey 5 457 6.5 6.5 6.5 0.7 465 chrX 7702909 intron CHES-1-like - chrX 7703142 intron CHES-1-like - chrX 7703374 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-822 2504 chrX 7784234 7784270 chrX 7784536 7784541 jockey 4 290 0.5 3.5 2.0 1.3 307 chrX 7784234 intergenic not near genes chrX 7784388 intergenic not near genes chrX 7784541 intergenic not near genes chrX_4_7780001 chrX_7780001 RAL-822 2505 chrX 7832409 7832464 chrX 7832528 7832562 19 117 4.0 3.0 3.5 4.2 153 chrX 7832409 intron CG1402 + chrX 7832486 intron CG1402 + chrX 7832562 intron CG1402 + chrX_19_7830001 chrX_7830001 RAL-822 2506 chrX 7881823 7881873 chrX 7881942 7881990 17 115 1.5 4.0 2.8 4.5 167 chrX 7881823 intergenic Ir7f -,Ir7e - chrX 7881906 intergenic Ir7f -,Ir7e - chrX 7881990 3` UTR Ir7f - chrX_17_7880001 chrX_7880001 RAL-822 2507 chrX 8031406 8031457 chrX 8035740 8035792 Juan 13 4340 2.5 3.5 3.0 3.2 4386 chrX 8031406 intergenic not near genes chrX 8033599 intergenic not near genes chrX 8035792 3` UTR CG2233 - chrX_13_8030001 chrX_8030001 RAL-822 2508 chrX 8092261 8092314 chrX 8092381 8092434 15 114 0.5 3.5 2.0 5.0 173 chrX 8092261 intron Ubc-E2H - chrX 8092348 intron Ubc-E2H - chrX 8092434 intron Ubc-E2H - chrX_15_8090001 chrX_8090001 RAL-822 2509 chrX 8232158 8232166 chrX 8232236 8232267 5 98 5.5 6.0 5.8 0.7 109 chrX 8232158 intron sdt + chrX 8232212 intron sdt + chrX 8232267 intron sdt + chrX_5_8230001 chrX_8230001 RAL-822 2510 chrX 8506504 8506560 chrX 8506742 8506753 5 223 5.0 3.0 4.0 1.0 249 chrX 8506504 intron CG33181 + chrX 8506628 intron CG33181 + chrX 8506753 intron CG33181 + chrX_5_8505001 chrX_8505001 RAL-822 2511 chrX 8536741 8536776 chrX 8536840 8536875 12 101 4.5 4.0 4.2 2.3 134 chrX 8536741 intron Nrg + chrX 8536808 intron Nrg + chrX 8536875 intron Nrg + chrX_12_8535001 chrX_8535001 RAL-822 2512 chrX 8544118 8544158 chrX 8544232 8544260 6 111 3.0 5.0 4.0 1.2 142 chrX 8544118 intron Nrg + chrX 8544189 intron Nrg + chrX 8544260 intron Nrg + chrX_6_8540001 chrX_8540001 RAL-822 2513 chrX 8772218 8772240 chrX 8772326 8772354 4 109 3.5 2.5 3.0 1.0 136 chrX 8772218 intron Lim1 - chrX 8772286 intron Lim1 - chrX 8772354 intron Lim1 - chrX_4_8770001 chrX_8770001 RAL-822 2514 chrX 8885633 8885678 chrX 8885768 8885805 14 133 0.0 3.5 1.8 5.0 172 chrX 8885633 intron Moe - chrX 8885719 intron Moe - chrX 8885805 intron Moe - chrX_14_8885001 chrX_8885001 RAL-822 2515 chrX 8888603 8888655 chrX 8888715 8888761 14 110 5.0 0.5 2.8 3.7 158 chrX 8888603 intron Moe - chrX 8888682 intron Moe - chrX 8888761 intron Moe - chrX_14_8885001 chrX_8885001 RAL-822 2516 chrX 8922326 8922341 chrX 8922761 8922779 jockey 4 436 1.5 2.5 2.0 1.3 453 chrX 8922326 intron rdgA + chrX 8922552 intron rdgA + chrX 8922779 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-822 2517 chrX 8922353 8922360 chrX 8922759 8922796 jockey 4 414 1.0 2.0 1.5 1.6 443 chrX 8922353 intron rdgA + chrX 8922574 intron rdgA + chrX 8922796 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-822 2518 chrX 8927571 8927608 chrX 8929854 8929907 NOF 7 2283 6.0 0.5 3.2 1.7 2336 chrX 8927571 intron rdgA + chrX 8928739 intron rdgA + chrX 8929907 intron rdgA + chrX_7_8925001 chrX_8925001 RAL-822 2519 chrX 8948734 8948788 chrX 8956279 8956280 roo 10 7534 2.0 4.0 3.0 2.5 7546 chrX 8948734 intron rdgA + chrX 8952507 intron rdgA + chrX 8956280 intron rdgA + chrX_10_8950001 chrX_8950001 RAL-822 2520 chrX 9187996 9188026 chrX 9188093 9188125 7 102 4.0 4.0 4.0 1.4 129 chrX 9187996 3` UTR mei-P26 + chrX 9188060 3` UTR mei-P26 + chrX 9188125 3` UTR mei-P26 + chrX_7_9185001 chrX_9185001 RAL-822 2521 chrX 9507293 9507329 chrX 9507417 9507453 6 123 3.0 2.5 2.8 1.6 160 chrX 9507293 intron CG32700 - chrX 9507373 intron CG32700 - chrX 9507453 intron CG32700 - chrX_6_9505001 chrX_9505001 RAL-822 2522 chrX 9508120 9508162 chrX 9509670 9509693 jockey 8 1542 2.5 0.5 1.5 3.2 1573 chrX 9508120 intron CG32700 - chrX 9508906 intron CG32700 - chrX 9509693 intron CG32700 - chrX_8_9505001 chrX_9505001 RAL-822 2523 chrX 9575799 9575816 chrX 9576133 9576163 mdg3 8 338 6.0 9.0 7.5 0.9 364 chrX 9575799 intron,exon CG32699 -,CG42395 - chrX 9575981 intron,intron CG32699 -,CG42395 - chrX 9576163 intron,5` UTR CG32699 -,CG42395 - chrX_8_9575001 chrX_9575001 RAL-822 2524 chrX 9791826 9791889 chrX 9791960 9791987 6 123 1.0 2.0 1.5 2.4 161 chrX 9791826 intron CG32698 + chrX 9791906 intron CG32698 + chrX 9791987 intron CG32698 + chrX_6_9790001 chrX_9790001 RAL-822 2525 chrX 9839319 9839378 chrX 9839437 9839444 4 101 0.0 2.0 1.0 2.0 125 chrX 9839319 intron CG32698 + chrX 9839382 intron CG32698 + chrX 9839444 intron CG32698 + chrX_4_9835001 chrX_9835001 RAL-822 2526 chrX 9915230 9915280 chrX 9915336 9915378 12 109 5.0 4.0 4.5 2.2 148 chrX 9915230 intergenic not near genes chrX 9915304 intergenic not near genes chrX 9915378 intergenic not near genes chrX_12_9915001 chrX_9915001 RAL-822 2527 chrX 10138193 10138245 chrX 10145721 10145779 412 11 7537 5.5 4.0 4.8 1.9 7586 chrX 10138193 intron,intron RhoU +,CR44894 - chrX 10141986 intron,intron RhoU +,CR44894 - chrX 10145779 intron,intron RhoU +,CR44894 - chrX_11_10140001 chrX_10140001 RAL-822 2528 chrX 10151894 10151935 chrX 10152006 10152010 4 103 1.0 4.0 2.5 1.1 116 chrX 10151894 intron CR44894 - chrX 10151952 intron CR44894 - chrX 10152010 intron CR44894 - chrX_4_10150001 chrX_10150001 RAL-822 2529 chrX 10209494 10209519 chrX 10209630 10209658 7 132 0.5 1.0 0.8 3.9 164 chrX 10209494 intron CG15309 - chrX 10209576 intron CG15309 - chrX 10209658 intron CG15309 - chrX_7_10205001 chrX_10205001 RAL-822 2530 chrX 10267309 10267331 chrX 10276479 10276512 roo 8 9181 0.5 5.0 2.8 2.1 9203 chrX 10267309 3` UTR alpha-Man-I - chrX 10271910 intron alpha-Man-I - chrX 10276512 3` UTR alpha-Man-I - chrX_8_10270001 chrX_10270001 RAL-822 2531 chrX 10306035 10306066 chrX 10306148 10306167 5 116 9.5 0.0 4.8 0.9 132 chrX 10306035 intron alpha-Man-I - chrX 10306101 intron alpha-Man-I - chrX 10306167 intron alpha-Man-I - chrX_5_10305001 chrX_10305001 RAL-822 2532 chrX 10348774 10348819 chrX 10356367 10356419 springer 10 7585 5.0 3.5 4.2 1.9 7645 chrX 10348774 intergenic snoRNA:U3:9B + chrX 10352596 intergenic not near genes chrX 10356419 intergenic l(1)G0289 - chrX_10_10350001 chrX_10350001 RAL-822 2533 chrX 10367156 10367205 chrX 10367300 10367327 10 122 2.0 1.0 1.5 4.0 171 chrX 10367156 exon CG32679 - chrX 10367242 intron CG32679 - chrX 10367327 intron CG32679 - chrX_10_10365001 chrX_10365001 RAL-822 2534 chrX 10431305 10431363 chrX 10431420 10431478 14 113 6.5 2.5 4.5 2.5 173 chrX 10431305 intron CG32683 - chrX 10431392 intron CG32683 - chrX 10431478 intron CG32683 - chrX_14_10430001 chrX_10430001 RAL-822 2535 chrX 10532477 10532527 chrX 10532585 10532641 11 106 6.0 5.5 5.8 1.6 164 chrX 10532477 intron spri - chrX 10532559 intron spri - chrX 10532641 intron spri - chrX_11_10530001 chrX_10530001 RAL-822 2536 chrX 10550303 10550365 chrX 10550416 10550461 15 107 4.5 4.0 4.2 2.9 158 chrX 10550303 intron spri - chrX 10550382 intron spri - chrX 10550461 intron spri - chrX_15_10550001 chrX_10550001 RAL-822 2537 chrX 10550835 10550883 chrX 10552329 10552365 hobo 6 1488 1.5 1.0 1.2 2.7 1530 chrX 10550835 intron spri - chrX 10551600 intron spri - chrX 10552365 intron spri - chrX_6_10550001 chrX_10550001 RAL-822 2538 chrX 10686027 10686083 chrX 10691199 10691230 roo 14 5164 2.5 3.5 3.0 3.5 5203 chrX 10686027 intron X11Lbeta + chrX 10688628 intron X11Lbeta + chrX 10691230 intron X11Lbeta + chrX_14_10685001 chrX_10685001 RAL-822 2539 chrX 10803000 10803046 chrX 10803120 10803164 8 112 3.5 3.5 3.5 1.8 164 chrX 10803000 intron Imp - chrX 10803082 intron Imp - chrX 10803164 intron Imp - chrX_8_10800001 chrX_10800001 RAL-822 2540 chrX 11062449 11062475 chrX 11062552 11062605 5 115 3.5 2.5 3.0 1.2 156 chrX 11062449 exon CG1537 - chrX 11062527 intron CG1537 - chrX 11062605 intron CG1537 - chrX_5_11060001 chrX_11060001 RAL-822 2541 chrX 11069139 11069171 chrX 11069317 11069331 7 171 7.5 4.5 6.0 1.0 192 chrX 11069139 intergenic not near genes chrX 11069235 intergenic not near genes chrX 11069331 intergenic not near genes chrX_7_11065001 chrX_11065001 RAL-822 2542 chrX 11095985 11096018 chrX 11103115 11103155 HMS-Beagle 9 7136 6.0 7.0 6.5 1.2 7170 chrX 11095985 intergenic not near genes chrX 11099570 intergenic not near genes chrX 11103155 intron CG42249 + chrX_9_11095001 chrX_11095001 RAL-822 2543 chrX 11109416 11109418 chrX 12946233 12946235 7 1836817 14.0 18.5 16.2 0.4 1836819 chrX 11109416 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_7_12025001 chrX_12025001 RAL-822 2544 chrX 11166728 11166766 chrX 11166844 11166850 6 99 5.0 4.0 4.5 1.1 122 chrX 11166728 intergenic not near genes chrX 11166789 intergenic not near genes chrX 11166850 intergenic not near genes chrX_6_11165001 chrX_11165001 RAL-822 2545 chrX 11166767 11166789 chrX 11166843 11166885 7 98 2.5 4.0 3.2 1.7 118 chrX 11166767 intergenic not near genes chrX 11166826 intergenic not near genes chrX 11166885 intergenic not near genes chrX_7_11165001 chrX_11165001 RAL-822 2546 chrX 11184214 11184278 chrX 11189325 11189369 flea 6 5104 0.0 3.5 1.8 2.1 5155 chrX 11184214 intergenic not near genes chrX 11186792 intergenic not near genes chrX 11189369 intergenic not near genes chrX_6_11185001 chrX_11185001 RAL-822 2547 chrX 11214978 11215013 chrX 11215350 11215410 6 391 1.5 2.5 2.0 2.0 432 chrX 11214978 intergenic not near genes chrX 11215194 intergenic not near genes chrX 11215410 intergenic not near genes chrX_6_11215001 chrX_11215001 RAL-822 2548 chrX 11633387 11633447 chrX 11640476 11640530 297 12 7086 5.0 3.5 4.2 2.3 7143 chrX 11633387 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640530 intron Ptp10D + chrX_12_11635001 chrX_11635001 RAL-822 2549 chrX 11645102 11645111 chrX 11648277 11648315 NOF 4 3185 5.0 3.0 4.0 0.8 3213 chrX 11645102 intron Ptp10D + chrX 11646708 intron Ptp10D + chrX 11648315 intron Ptp10D + chrX_4_11645001 chrX_11645001 RAL-822 2550 chrX 11649008 11649013 chrX 11649071 11649074 4 67 1.0 6.5 3.8 0.8 66 chrX 11649008 intron Ptp10D + chrX 11649041 intron Ptp10D + chrX 11649074 intron Ptp10D + chrX_4_11645001 chrX_11645001 RAL-822 2551 chrX 11783508 11783552 chrX 11783604 11783610 8 101 3.0 6.5 4.8 1.4 102 chrX 11783508 intergenic not near genes chrX 11783559 intergenic not near genes chrX 11783610 intergenic not near genes chrX_8_11780001 chrX_11780001 RAL-822 2552 chrX 11798985 11799037 chrX 11799105 11799158 16 111 2.5 2.0 2.2 5.0 173 chrX 11798985 intron CkIIbeta + chrX 11799072 intron CkIIbeta + chrX 11799158 intron CkIIbeta + chrX_16_11795001 chrX_11795001 RAL-822 2553 chrX 11915629 11915673 chrX 11915935 11915951 14 320 4.0 6.5 5.2 2.3 322 chrX 11915629 intron pot - chrX 11915790 intron pot - chrX 11915951 intron pot - chrX_14_11915001 chrX_11915001 RAL-822 2554 chrX 11922350 11922375 chrX 11922498 11922543 12 164 5.0 3.5 4.2 2.3 193 chrX 11922350 exon Sclp - chrX 11922446 intron Sclp - chrX 11922543 intron Sclp - chrX_12_11920001 chrX_11920001 RAL-822 2555 chrX 11936563 11936583 chrX 11936671 11936707 5 124 0.0 1.0 0.5 3.3 144 chrX 11936563 intron cac - chrX 11936635 intron cac - chrX 11936707 exon cac - chrX_5_11935001 chrX_11935001 RAL-822 2556 chrX 12168105 12168167 chrX 12173582 12173597 I-element 4 5454 3.0 3.5 3.2 1.0 5492 chrX 12168105 intron Ten-a + chrX 12170851 intron Ten-a + chrX 12173597 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-822 2557 chrX 12191571 12191585 chrX 12191685 12191700 7 117 1.5 4.0 2.8 1.8 129 chrX 12191571 intron Ten-a + chrX 12191636 intron Ten-a + chrX 12191700 intron Ten-a + chrX_7_12190001 chrX_12190001 RAL-822 2558 chrX 12205910 12205933 chrX 12206002 12206045 5 107 0.0 5.5 2.8 1.3 135 chrX 12205910 intron Ten-a + chrX 12205978 intron Ten-a + chrX 12206045 intron Ten-a + chrX_5_12205001 chrX_12205001 RAL-822 2559 chrX 12350752 12350782 chrX 12350853 12350879 5 100 4.0 0.0 2.0 1.7 127 chrX 12350752 intergenic not near genes chrX 12350816 intergenic not near genes chrX 12350879 intergenic not near genes chrX_5_12350001 chrX_12350001 RAL-822 2560 chrX 12528836 12528880 chrX 12528940 12528961 10 97 6.5 2.5 4.5 1.8 125 chrX 12528836 intron CG43921 - chrX 12528898 intron CG43921 - chrX 12528961 intron CG43921 - chrX_10_12525001 chrX_12525001 RAL-822 2561 chrX 12533780 12533817 chrX 12533871 12533889 4 91 0.0 0.0 0.0 4.0 109 chrX 12533780 intron CG43921 - chrX 12533834 intron CG43921 - chrX 12533889 intron CG43921 - chrX_4_12530001 chrX_12530001 RAL-822 2562 chrX 12539411 12539462 chrX 12539530 12539542 10 113 6.5 3.5 5.0 1.7 131 chrX 12539411 intron CG43921 - chrX 12539476 intron CG43921 - chrX 12539542 intron CG43921 - chrX_10_12535001 chrX_12535001 RAL-822 2563 chrX 9845361 9845361 chrX 12546496 12546496 gypsy5 5 2701135 12.0 13.5 12.8 0.4 2701135 chrX 9845361 intron CG32698 + chrX 11195928 intergenic not near genes chrX 12546496 intron CG43921 - chrX_5_11195001 chrX_11195001 RAL-822 2564 chrX 12562103 12562163 chrX 12562265 12562325 8 159 3.5 0.5 2.0 2.7 222 chrX 12562103 intron CG43921 - chrX 12562214 intron CG43921 - chrX 12562325 intron CG43921 - chrX_8_12560001 chrX_12560001 RAL-822 2565 chrX 12785398 12785441 chrX 12785505 12785553 7 110 3.5 4.5 4.0 1.4 155 chrX 12785398 intergenic Pde9 -,CG32647 - chrX 12785476 intergenic Pde9 - chrX 12785553 intergenic Pde9 - chrX_7_12785001 chrX_12785001 RAL-822 2566 chrX 12930562 12930601 chrX 12937713 12937752 HMS-Beagle 6 7151 3.0 8.0 5.5 0.9 7190 chrX 12930562 intron fne + chrX 12934157 intron fne + chrX 12937752 intron fne + chrX_6_12930001 chrX_12930001 RAL-822 2567 chrX 11109417 11109417 chrX 12946234 12946234 10 1836817 14.0 18.5 16.2 0.6 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_10_12025001 chrX_12025001 RAL-822 2568 chrX 11109417 11109417 chrX 12946235 12946235 11 1836818 14.0 18.0 16.0 0.6 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_11_12025001 chrX_12025001 RAL-822 2569 chrX 12946235 12946235 chrX 18572524 18572526 8 5626290 15.5 17.0 16.2 0.5 5626291 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_8_15755001 chrX_15755001 RAL-822 2570 chrX 12946235 12946235 chrX 19355850 19355850 5 6409615 15.5 3.0 9.2 0.5 6409615 chrX 12946235 3` UTR fne + chrX 16151042 intergenic not near genes chrX 19355850 intron kek5 + chrX_5_16150001 chrX_16150001 RAL-822 2571 chrX 12953865 12953919 chrX 12954038 12954093 4 172 2.0 4.5 3.2 1.0 228 chrX 12953865 intron hec - chrX 12953979 intron hec - chrX 12954093 intron hec - chrX_4_12950001 chrX_12950001 RAL-822 2572 chrX 13018489 13018525 chrX 13018605 13018644 11 118 3.5 2.5 3.0 2.8 155 chrX 13018489 intron rad + chrX 13018566 intron rad + chrX 13018644 intron rad + chrX_11_13015001 chrX_13015001 RAL-822 2573 chrX 13099106 13099137 chrX 13099222 13099265 5 124 0.0 4.0 2.0 1.7 159 chrX 13099106 intron CG43313 - chrX 13099186 intron CG43313 - chrX 13099265 intron CG43313 - chrX_5_13095001 chrX_13095001 RAL-822 2574 chrX 13172359 13172383 chrX 13172435 13172462 6 88 0.5 2.0 1.2 2.7 103 chrX 13172359 exon CG34411 - chrX 13172410 intron CG34411 - chrX 13172462 intron CG34411 - chrX_6_13170001 chrX_13170001 RAL-822 2575 chrX 13225209 13225263 chrX 13225412 13225453 9 201 4.0 2.5 3.2 2.1 244 chrX 13225209 intron mew - chrX 13225331 intron mew - chrX 13225453 intron mew - chrX_9_13225001 chrX_13225001 RAL-822 2576 chrX 13238081 13238100 chrX 13238193 13238212 5 109 0.0 4.0 2.0 1.7 131 chrX 13238081 intron mew - chrX 13238146 intron mew - chrX 13238212 intron mew - chrX_5_13235001 chrX_13235001 RAL-822 2577 chrX 13278123 13278178 chrX 13278241 13278296 7 116 4.0 5.0 4.5 1.3 173 chrX 13278123 intron HDAC4 - chrX 13278210 intron HDAC4 - chrX 13278296 intron HDAC4 - chrX_7_13275001 chrX_13275001 RAL-822 2578 chrX 13057300 13057301 chrX 13307077 13307078 6 249777 17.0 3.5 10.2 0.5 249778 chrX 13057300 intron rad + chrX 13182189 intron CG34411 - chrX 13307078 intron,5` UTR IP3K2 +,CR45018 + chrX_6_13180001 chrX_13180001 RAL-822 2579 chrX 13329309 13329317 chrX 13329413 13329436 4 112 0.0 0.5 0.2 3.3 127 chrX 13329309 intergenic IP3K2 + chrX 13329372 intergenic IP3K2 +,Jafrac1 + chrX 13329436 intergenic IP3K2 +,Jafrac1 + chrX_4_13325001 chrX_13325001 RAL-822 2580 chrX 13401463 13401513 chrX 13401834 13401880 jockey 8 380 1.5 4.0 2.8 2.1 417 chrX 13401463 intergenic CG1673 +,CG12725 - chrX 13401672 intergenic CG12725 -,CG1673 + chrX 13401880 3` UTR CG12725 - chrX_8_13400001 chrX_13400001 RAL-822 2581 chrX 13429472 13429483 chrX 13430629 13430648 jockey 4 1167 5.0 7.5 6.2 0.6 1176 chrX 13429472 intergenic not near genes chrX 13430060 intergenic not near genes chrX 13430648 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-822 2582 chrX 13442118 13442159 chrX 13442231 13442250 10 113 0.5 0.5 0.5 6.7 132 chrX 13442118 intergenic not near genes chrX 13442184 intergenic not near genes chrX 13442250 intergenic not near genes chrX_10_13440001 chrX_13440001 RAL-822 2583 chrX 13463618 13463675 chrX 13469225 13469246 mdg3 14 5602 4.5 3.5 4.0 2.8 5628 chrX 13463618 intron Neto + chrX 13466432 intron Neto + chrX 13469246 intron Neto + chrX_14_13465001 chrX_13465001 RAL-822 2584 chrX 13706681 13706711 chrX 13706762 13706803 4 97 0.5 0.5 0.5 2.7 122 chrX 13706681 intron,intron CG9940 -,NnaD + chrX 13706742 intron,intron CG9940 -,NnaD + chrX 13706803 intron,intron CG9940 -,NnaD + chrX_4_13705001 chrX_13705001 RAL-822 2585 chrX 13736928 13736980 chrX 13740594 13740652 27 3672 29.5 29.5 29.5 0.9 3724 chrX 13736928 3` UTR Grip91 - chrX 13738790 intron,exon Grip91 -,CG11134 + chrX 13740652 intron,intron Grip91 -,CG11151 + chrX_27_13735001 chrX_13735001 RAL-822 2586 chrX 13894397 13894412 chrX 13894476 13894484 5 91 1.0 2.5 1.8 1.8 87 chrX 13894397 intron mamo - chrX 13894440 intron mamo - chrX 13894484 intron mamo - chrX_5_13890001 chrX_13890001 RAL-822 2587 chrX 13934276 13934311 chrX 13934394 13934407 8 115 1.0 5.5 3.2 1.9 131 chrX 13934276 intron mamo - chrX 13934342 intron mamo - chrX 13934407 intron mamo - chrX_8_13930001 chrX_13930001 RAL-822 2588 chrX 13937959 13938005 chrX 13941250 13941296 I-element 4 3295 2.5 0.5 1.5 1.6 3337 chrX 13937959 intron mamo - chrX 13939628 intron mamo - chrX 13941296 intron mamo - chrX_4_13935001 chrX_13935001 RAL-822 2589 chrX 14105038 14105056 chrX 14114178 14114181 roo 8 9148 2.0 2.5 2.2 2.5 9143 chrX 14105038 intergenic not near genes chrX 14109610 intergenic not near genes chrX 14114181 5` UTR CR44657 + chrX_8_14105001 chrX_14105001 RAL-822 2590 chrX 14131513 14131517 chrX 14131579 14131613 4 86 0.5 2.0 1.2 1.8 100 chrX 14131513 intergenic not near genes chrX 14131563 intergenic not near genes chrX 14131613 intergenic not near genes chrX_4_14130001 chrX_14130001 RAL-822 2591 chrX 14167373 14167430 chrX 14167503 14167545 15 126 1.0 2.5 1.8 5.4 172 chrX 14167373 intergenic not near genes chrX 14167459 intergenic not near genes chrX 14167545 intergenic not near genes chrX_15_14165001 chrX_14165001 RAL-822 2592 chrX 14209430 14209490 chrX 14209554 14209616 8 124 2.0 5.5 3.8 1.7 186 chrX 14209430 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209523 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209616 intron,intron l(1)G0007 +,l(1)G0469 - chrX_8_14205001 chrX_14205001 RAL-822 2593 chrX 14381387 14381402 chrX 14381572 14381591 5 187 4.5 2.5 3.5 1.1 204 chrX 14381387 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381489 intron dpr8 + chrX 14381591 intron dpr8 + chrX_5_14380001 chrX_14380001 RAL-822 2594 chrX 14396812 14396874 chrX 14396924 14396958 12 95 1.0 1.5 1.2 5.5 146 chrX 14396812 intron dpr8 + chrX 14396885 intron dpr8 + chrX 14396958 intron dpr8 + chrX_12_14395001 chrX_14395001 RAL-822 2595 chrX 14416287 14416338 chrX 14421089 14421105 F-element 13 4793 1.5 5.5 3.5 2.9 4818 chrX 14416287 intron dpr8 + chrX 14418696 intron dpr8 + chrX 14421105 intron dpr8 + chrX_13_14415001 chrX_14415001 RAL-822 2596 chrX 14570054 14570107 chrX 14570161 14570213 5 106 4.0 1.0 2.5 1.4 159 chrX 14570054 intergenic not near genes chrX 14570134 intergenic not near genes chrX 14570213 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-822 2597 chrX 14593793 14593809 chrX 14593890 14593926 5 107 4.5 5.0 4.8 0.9 133 chrX 14593793 intron CG9413 - chrX 14593860 intron CG9413 - chrX 14593926 intron CG9413 - chrX_5_14590001 chrX_14590001 RAL-822 2598 chrX 14636453 14636480 chrX 14641924 14641930 I-element 9 5466 6.5 2.5 4.5 1.6 5477 chrX 14636453 intron NetA - chrX 14639192 intron NetA - chrX 14641930 intron NetA - chrX_9_14635001 chrX_14635001 RAL-822 2599 chrX 14752801 14752855 chrX 14752917 14752961 9 116 3.5 6.5 5.0 1.5 160 chrX 14752801 intergenic not near genes chrX 14752881 intergenic not near genes chrX 14752961 intergenic not near genes chrX_9_14750001 chrX_14750001 RAL-822 2600 chrX 14778008 14778049 chrX 14782840 14782876 Doc 12 4830 7.5 9.0 8.2 1.3 4868 chrX 14778008 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782876 intergenic Ag5r2 - chrX_12_14780001 chrX_14780001 RAL-822 2601 chrX 14806733 14806771 chrX 14806856 14806874 15 119 1.0 0.0 0.5 10.0 141 chrX 14806733 intron rut - chrX 14806804 intron rut - chrX 14806874 intron rut - chrX_15_14805001 chrX_14805001 RAL-822 2602 chrX 14888933 14888982 chrX 14889044 14889102 8 119 0.5 3.0 1.8 2.9 169 chrX 14888933 intron,intron Flo2 +,CG9514 - chrX 14889018 intron,intron Flo2 +,CG9514 - chrX 14889102 intron,intron Flo2 +,CG9514 - chrX_8_14885001 chrX_14885001 RAL-822 2603 chrX 14936837 14936847 chrX 14946124 14946139 roo 4 9291 12.0 4.5 8.2 0.4 9302 chrX 14936837 intron pdgy - chrX 14941488 intron pdgy - chrX 14946139 intron pdgy - chrX_4_14940001 chrX_14940001 RAL-822 2604 chrX 14936848 14936887 chrX 14946120 14946166 roo 9 9286 6.0 4.0 5.0 1.5 9318 chrX 14936848 intron pdgy - chrX 14941507 intron pdgy - chrX 14946166 intron pdgy - chrX_9_14940001 chrX_14940001 RAL-822 2605 chrX 14968039 14968100 chrX 14968153 14968208 10 104 0.0 5.0 2.5 2.9 169 chrX 14968039 intron eag + chrX 14968124 intron eag + chrX 14968208 intron eag + chrX_10_14965001 chrX_14965001 RAL-822 2606 chrX 14981704 14981740 chrX 14981813 14981835 6 110 2.0 8.0 5.0 1.0 131 chrX 14981704 intron eag + chrX 14981770 intron eag + chrX 14981835 intron eag + chrX_6_14980001 chrX_14980001 RAL-822 2607 chrX 15127194 15127203 chrX 15127390 15127399 4 196 14.5 4.5 9.5 0.4 205 chrX 15127194 intron drd + chrX 15127296 intron drd + chrX 15127399 intron drd + chrX_4_15125001 chrX_15125001 RAL-822 2608 chrX 15127204 15127232 chrX 15127383 15127428 5 192 10.0 2.5 6.2 0.7 224 chrX 15127204 intron drd + chrX 15127316 intron drd + chrX 15127428 intron drd + chrX_5_15125001 chrX_15125001 RAL-822 2609 chrX 15200616 15200637 chrX 15200717 15200748 8 109 5.5 4.0 4.8 1.4 132 chrX 15200616 intergenic not near genes chrX 15200682 intergenic not near genes chrX 15200748 intergenic not near genes chrX_8_15200001 chrX_15200001 RAL-822 2610 chrX 15234341 15234388 chrX 15234459 15234496 6 114 4.5 8.5 6.5 0.8 155 chrX 15234341 intergenic not near genes chrX 15234418 intergenic not near genes chrX 15234496 intergenic not near genes chrX_6_15230001 chrX_15230001 RAL-822 2611 chrX 15248239 15248285 chrX 15248344 15248387 7 106 1.0 2.0 1.5 2.8 148 chrX 15248239 intergenic not near genes chrX 15248313 intergenic not near genes chrX 15248387 intergenic not near genes chrX_7_15245001 chrX_15245001 RAL-822 2612 chrX 15287581 15287638 chrX 15287701 15287732 5 114 0.0 0.0 0.0 5.0 151 chrX 15287581 intergenic not near genes chrX 15287656 intergenic not near genes chrX 15287732 intergenic not near genes chrX_5_15285001 chrX_15285001 RAL-822 2613 chrX 15369793 15369823 chrX 15369911 15369930 7 112 3.0 1.0 2.0 2.3 137 chrX 15369793 intron acj6 - chrX 15369862 intron acj6 - chrX 15369930 intron acj6 - chrX_7_15365001 chrX_15365001 RAL-822 2614 chrX 15413029 15413059 chrX 15417359 15417384 Juan 5 4322 3.0 3.5 3.2 1.2 4355 chrX 15413029 intron Cngl - chrX 15415206 intron Cngl - chrX 15417384 intron Cngl - chrX_5_15415001 chrX_15415001 RAL-822 2615 chrX 15435697 15435701 chrX 15436125 15436149 rover 4 453 0.0 2.0 1.0 2.0 452 chrX 15435697 intron Cngl - chrX 15435923 intron Cngl - chrX 15436149 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-822 2616 chrX 15536671 15536708 chrX 15536775 15536805 6 100 3.5 6.5 5.0 1.0 134 chrX 15536671 intron Ac13E - chrX 15536738 intron Ac13E - chrX 15536805 intron Ac13E - chrX_6_15535001 chrX_15535001 RAL-822 2617 chrX 15589434 15589458 chrX 15589647 15589657 4 208 3.5 4.5 4.0 0.8 223 chrX 15589434 intron CG9220 - chrX 15589546 intron CG9220 - chrX 15589657 exon CG9220 - chrX_4_15585001 chrX_15585001 RAL-822 2618 chrX 15591185 15591200 chrX 15591250 15591309 6 95 0.0 1.0 0.5 4.0 124 chrX 15591185 intron CG9220 - chrX 15591247 intron CG9220 - chrX 15591309 intron CG9220 - chrX_6_15590001 chrX_15590001 RAL-822 2619 chrX 15749625 15749679 chrX 15749761 15749807 16 136 1.0 0.5 0.8 8.9 182 chrX 15749625 intron CG8239 + chrX 15749716 intron CG8239 + chrX 15749807 intron CG8239 + chrX_16_15745001 chrX_15745001 RAL-822 2620 chrX 15864372 15864397 chrX 15866981 15867007 11 2610 30.5 19.5 25.0 0.4 2635 chrX 15864372 3` UTR Gbeta13F + chrX 15865690 3` UTR Gbeta13F + chrX 15867007 intergenic not near genes chrX_11_15865001 chrX_15865001 RAL-822 2621 chrX 15869783 15869829 chrX 15869978 15870025 15 191 3.0 4.5 3.8 3.1 242 chrX 15869783 intergenic Gapdh2 +,CG16952 + chrX 15869904 intergenic Gapdh2 +,CG16952 + chrX 15870025 intergenic CG16952 +,Gapdh2 + chrX_15_15865001 chrX_15865001 RAL-822 2622 chrX 15898434 15898451 chrX 15898606 15898608 5 173 5.0 5.5 5.2 0.8 174 chrX 15898434 intron shi + chrX 15898521 intron shi + chrX 15898608 intron shi + chrX_5_15895001 chrX_15895001 RAL-822 2623 chrX 15939236 15939303 chrX 15939356 15939418 8 113 1.5 4.5 3.0 2.0 182 chrX 15939236 5` UTR Stim - chrX 15939327 intron Stim - chrX 15939418 intron Stim - chrX_8_15935001 chrX_15935001 RAL-822 2624 chrX 16100522 16100586 chrX 16100636 16100692 6 108 3.5 1.5 2.5 1.7 170 chrX 16100522 intron,intron CG42353 -,CG42354 - chrX 16100607 intron,intron CG42353 -,CG42354 - chrX 16100692 intron,intron CG42353 -,CG42354 - chrX_6_16100001 chrX_16100001 RAL-822 2625 chrX 16101985 16102012 chrX 16104715 16104748 6 2730 10.5 22.0 16.2 0.3 2763 chrX 16101985 intron,intron CG42353 -,CG42354 - chrX 16103366 intron,intron CG42353 -,CG42354 - chrX 16104748 intron,intron CG42353 -,CG42354 - chrX_6_16100001 chrX_16100001 RAL-822 2626 chrX 16160262 16160294 chrX 16160373 16160405 9 107 2.5 2.0 2.2 2.8 143 chrX 16160262 intergenic not near genes chrX 16160334 intergenic not near genes chrX 16160405 intergenic not near genes chrX_9_16160001 chrX_16160001 RAL-822 2627 chrX 16222759 16222773 chrX 16231138 16231158 roo 7 8384 8.0 4.5 6.2 1.0 8399 chrX 16222759 intergenic not near genes chrX 16226958 intergenic not near genes chrX 16231158 intergenic not near genes chrX_7_16225001 chrX_16225001 RAL-822 2628 chrX 16222774 16222802 chrX 16231136 16231187 roo 17 8382 6.0 4.0 5.0 2.8 8413 chrX 16222774 intergenic not near genes chrX 16226980 intergenic not near genes chrX 16231187 intergenic not near genes chrX_17_16225001 chrX_16225001 RAL-822 2629 chrX 16265142 16265155 chrX 16265253 16265256 4 107 2.5 0.0 1.2 1.8 114 chrX 16265142 intergenic CG12507 - chrX 16265199 intergenic CG12507 - chrX 16265256 3` UTR CG12507 - chrX_4_16265001 chrX_16265001 RAL-822 2630 chrX 16295500 16295519 chrX 16295619 16295637 9 117 9.5 0.0 4.8 1.6 137 chrX 16295500 intron CG9911 - chrX 16295568 intron CG9911 - chrX 16295637 intron CG9911 - chrX_9_16295001 chrX_16295001 RAL-822 2631 chrX 16329389 16329449 chrX 16329503 16329532 5 106 0.0 2.5 1.2 2.3 143 chrX 16329389 intron CG9919 - chrX 16329460 intron CG9919 - chrX 16329532 exon CG9919 - chrX_5_16325001 chrX_16325001 RAL-822 2632 chrX 16340665 16340691 chrX 16349825 16349883 roo 7 9176 5.5 7.0 6.2 1.0 9218 chrX 16340665 intergenic Dsp1 + chrX 16345274 intergenic not near genes chrX 16349883 intergenic sl + chrX_7_16345001 chrX_16345001 RAL-822 2633 chrX 16404333 16404384 chrX 16404449 16404515 9 123 3.5 4.0 3.8 1.9 182 chrX 16404333 intron CG9981 - chrX 16404424 intron CG9981 - chrX 16404515 5` UTR CG9981 - chrX_9_16400001 chrX_16400001 RAL-822 2634 chrX 16492620 16492669 chrX 16498232 16498256 mdg3 12 5609 4.0 3.0 3.5 2.7 5636 chrX 16492620 intron para - chrX 16495438 intron para - chrX 16498256 intron para - chrX_12_16495001 chrX_16495001 RAL-822 2635 chrX 16529379 16529442 chrX 16529532 16529537 4 128 0.0 3.5 1.8 1.4 158 chrX 16529379 intron para - chrX 16529458 intron para - chrX 16529537 intron para - chrX_4_16525001 chrX_16525001 RAL-822 2636 chrX 16689628 16689631 chrX 16689714 16689715 4 91 3.0 1.0 2.0 1.3 87 chrX 16689628 intron Sep4 - chrX 16689672 intron Sep4 - chrX 16689715 intron Sep4 - chrX_4_16685001 chrX_16685001 RAL-822 2637 chrX 16690436 16690463 chrX 16690537 16690541 4 85 2.5 2.5 2.5 1.1 105 chrX 16690436 intron Sep4 - chrX 16690488 intron Sep4 - chrX 16690541 intron Sep4 - chrX_4_16690001 chrX_16690001 RAL-822 2638 chrX 16690471 16690477 chrX 16690536 16690562 4 78 2.0 2.5 2.2 1.2 91 chrX 16690471 intron Sep4 - chrX 16690516 intron Sep4 - chrX 16690562 intron Sep4 - chrX_4_16690001 chrX_16690001 RAL-822 2639 chrX 16762591 16762599 chrX 16762765 16762782 4 181 4.5 3.5 4.0 0.8 191 chrX 16762591 intron if - chrX 16762686 intron if - chrX 16762782 intron if - chrX_4_16760001 chrX_16760001 RAL-822 2640 chrX 16821203 16821266 chrX 16821318 16821381 5 112 1.5 0.0 0.8 2.8 178 chrX 16821203 intron CG4829 + chrX 16821292 intron CG4829 + chrX 16821381 intron CG4829 + chrX_5_16820001 chrX_16820001 RAL-822 2641 chrX 16874004 16874051 chrX 16874115 16874115 7 103 0.0 4.0 2.0 2.3 111 chrX 16874004 intron CG13003 - chrX 16874060 intron CG13003 - chrX 16874115 intron CG13003 - chrX_7_16870001 chrX_16870001 RAL-822 2642 chrX 1053117 1053123 chrX 16983076 16983076 4 15929955 7.5 14.5 11.0 0.3 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-822 2643 chrX 16983077 16983077 chrX 19404963 19404963 5 2421886 17.0 5.0 11.0 0.4 2421886 chrX 16983077 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404963 intron kek5 + chrX_5_18190001 chrX_18190001 RAL-822 2644 chrX 17011972 17012000 chrX 17012051 17012074 5 86 1.5 3.0 2.2 1.6 102 chrX 17011972 intron CG45002 - chrX 17012023 intron CG45002 - chrX 17012074 intron CG45002 - chrX_5_17010001 chrX_17010001 RAL-822 2645 chrX 17057908 17057965 chrX 17058179 17058241 pogo 9 270 1.0 5.5 3.2 2.1 333 chrX 17057908 intron CG45002 - chrX 17058074 intron CG45002 - chrX 17058241 intron CG45002 - chrX_9_17055001 chrX_17055001 RAL-822 2646 chrX 17061534 17061574 chrX 17061692 17061717 4 154 3.5 1.0 2.2 1.2 183 chrX 17061534 intron CG45002 - chrX 17061626 intron CG45002 - chrX 17061717 intron CG45002 - chrX_4_17060001 chrX_17060001 RAL-822 2647 chrX 17088189 17088196 chrX 17088812 17088824 4 625 2.5 7.0 4.8 0.7 635 chrX 17088189 intergenic not near genes chrX 17088506 intergenic not near genes chrX 17088824 intergenic not near genes chrX_4_17085001 chrX_17085001 RAL-822 2648 chrX 17195177 17195226 chrX 17200298 17200339 flea 16 5115 3.5 2.5 3.0 4.0 5162 chrX 17195177 3` UTR baz + chrX 17197758 3` UTR baz + chrX 17200339 3` UTR baz + chrX_16_17195001 chrX_17195001 RAL-822 2649 chrX 17205818 17205855 chrX 17205943 17205979 13 122 4.0 6.0 5.0 2.2 161 chrX 17205818 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205979 intergenic CG32564 + chrX_13_17205001 chrX_17205001 RAL-822 2650 chrX 17282848 17282909 chrX 17282953 17282974 9 92 1.5 0.0 0.8 5.0 126 chrX 17282848 intron CG5445 + chrX 17282911 5` UTR CG5445 + chrX 17282974 5` UTR CG5445 + chrX_9_17280001 chrX_17280001 RAL-822 2651 chrX 17316340 17316388 chrX 17316459 17316490 15 114 2.0 0.0 1.0 7.5 150 chrX 17316340 intron B-H2 + chrX 17316415 intron B-H2 + chrX 17316490 intron B-H2 + chrX_15_17315001 chrX_17315001 RAL-822 2652 chrX 17427037 17427060 chrX 17427154 17427160 6 114 4.5 9.5 7.0 0.8 123 chrX 17427037 intron,intron CG12994 -,CG5613 + chrX 17427098 intron,intron CG12994 -,CG5613 + chrX 17427160 intron,intron CG12994 -,CG5613 + chrX_6_17425001 chrX_17425001 RAL-822 2653 chrX 17427061 17427075 chrX 17427138 17427196 8 109 2.5 6.5 4.5 1.5 135 chrX 17427061 intron,intron CG12994 -,CG5613 + chrX 17427128 intron,intron CG12994 -,CG5613 + chrX 17427196 intron,intron CG12994 -,CG5613 + chrX_8_17425001 chrX_17425001 RAL-822 2654 chrX 17434396 17434429 chrX 17434524 17434542 6 124 3.5 0.0 1.8 2.1 146 chrX 17434396 intron CG12994 - chrX 17434469 intron CG12994 - chrX 17434542 intron CG12994 - chrX_6_17430001 chrX_17430001 RAL-822 2655 chrX 17435720 17435771 chrX 17435831 17435881 12 106 5.5 6.5 6.0 1.7 161 chrX 17435720 intron CG12994 - chrX 17435800 intron CG12994 - chrX 17435881 intron CG12994 - chrX_12_17435001 chrX_17435001 RAL-822 2656 chrX 17502314 17502363 chrX 17502429 17502440 13 104 3.0 3.0 3.0 3.2 126 chrX 17502314 intron CG43658 - chrX 17502377 intron CG43658 - chrX 17502440 intron CG43658 - chrX_13_17500001 chrX_17500001 RAL-822 2657 chrX 17536828 17536863 chrX 17536947 17536964 10 112 0.0 4.5 2.2 3.1 136 chrX 17536828 intron CG43658 - chrX 17536896 intron CG43658 - chrX 17536964 intron CG43658 - chrX_10_17535001 chrX_17535001 RAL-822 2658 chrX 17544983 17545019 chrX 17545090 17545126 4 111 4.5 1.0 2.8 1.1 143 chrX 17544983 intron CG43658 - chrX 17545054 intron CG43658 - chrX 17545126 intron CG43658 - chrX_4_17545001 chrX_17545001 RAL-822 2659 chrX 17680891 17680921 chrX 17680975 17680994 4 82 3.0 4.0 3.5 0.9 103 chrX 17680891 intron chas - chrX 17680942 intron chas - chrX 17680994 intron chas - chrX_4_17680001 chrX_17680001 RAL-822 2660 chrX 17708797 17708849 chrX 17708908 17708947 7 108 5.0 2.5 3.8 1.5 150 chrX 17708797 intron CG8173 - chrX 17708872 intron CG8173 - chrX 17708947 intron CG8173 - chrX_7_17705001 chrX_17705001 RAL-822 2661 chrX 18020796 18020846 chrX 18020907 18020944 14 113 2.5 4.0 3.2 3.3 148 chrX 18020796 intron Sh - chrX 18020870 intron Sh - chrX 18020944 intron Sh - chrX_14_18020001 chrX_18020001 RAL-822 2662 chrX 18130464 18130515 chrX 18130577 18130610 11 111 3.0 3.0 3.0 2.8 146 chrX 18130464 3` UTR ari-1 - chrX 18130537 3` UTR ari-1 - chrX 18130610 3` UTR ari-1 - chrX_11_18130001 chrX_18130001 RAL-822 2663 chrX 18148604 18148625 chrX 18148742 18148763 10 138 6.0 1.5 3.8 2.1 159 chrX 18148604 intergenic not near genes chrX 18148684 intergenic not near genes chrX 18148763 intergenic not near genes chrX_10_18145001 chrX_18145001 RAL-822 2664 chrX 18194044 18194093 chrX 18194613 18194653 BS 11 564 4.5 4.5 4.5 2.0 609 chrX 18194044 intron Frq2 + chrX 18194348 intron Frq2 + chrX 18194653 intron Frq2 + chrX_11_18190001 chrX_18190001 RAL-822 2665 chrX 18320454 18320502 chrX 18320621 18320669 8 165 0.5 3.0 1.8 2.9 215 chrX 18320454 intron CG6023 - chrX 18320562 intron CG6023 - chrX 18320669 intron CG6023 - chrX_8_18320001 chrX_18320001 RAL-822 2666 chrX 18427357 18427387 chrX 18427801 18427833 8 444 4.5 7.0 5.8 1.2 476 chrX 18427357 intergenic CG42323 + chrX 18427595 intergenic not near genes chrX 18427833 intergenic not near genes chrX_8_18425001 chrX_18425001 RAL-822 2667 chrX 18429475 18429520 chrX 18434811 18434860 Transpac 10 5337 4.0 5.5 4.8 1.7 5385 chrX 18429475 intergenic not near genes chrX 18432168 intergenic not near genes chrX 18434860 intergenic not near genes chrX_10_18430001 chrX_18430001 RAL-822 2668 chrX 18486103 18486132 chrX 18486206 18486244 7 112 1.5 3.0 2.2 2.2 141 chrX 18486103 exon psh - chrX 18486174 intron psh - chrX 18486244 intron psh - chrX_7_18485001 chrX_18485001 RAL-822 2669 chrX 18524329 18524375 chrX 18524433 18524489 12 111 3.0 1.0 2.0 4.0 160 chrX 18524329 intron Bx + chrX 18524409 intron Bx + chrX 18524489 intron Bx + chrX_12_18520001 chrX_18520001 RAL-822 2670 chrX 18555350 18555396 chrX 18556906 18556948 transib2 5 1555 1.5 5.0 3.2 1.2 1598 chrX 18555350 intron Bx + chrX 18556149 intron Bx + chrX 18556948 intron Bx + chrX_5_18555001 chrX_18555001 RAL-822 2671 chrX 18558763 18558808 chrX 18558865 18558908 8 106 1.0 5.0 3.0 2.0 145 chrX 18558763 intron Bx + chrX 18558836 intron Bx + chrX 18558908 intron Bx + chrX_8_18555001 chrX_18555001 RAL-822 2672 chrX 12946235 12946235 chrX 18572525 18572527 4 5626291 15.5 17.5 16.5 0.2 5626292 chrX 12946235 3` UTR fne + chrX 15759381 intron Graf - chrX 18572527 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-822 2673 chrX 18574771 18574810 chrX 18574881 18574925 13 111 2.0 2.5 2.2 4.1 154 chrX 18574771 intergenic not near genes chrX 18574848 intergenic not near genes chrX 18574925 intergenic not near genes chrX_13_18570001 chrX_18570001 RAL-822 2674 chrX 18576091 18576102 chrX 18576189 18576214 4 106 1.5 3.0 2.2 1.2 123 chrX 18576091 intergenic not near genes chrX 18576152 intergenic not near genes chrX 18576214 intergenic not near genes chrX_4_18575001 chrX_18575001 RAL-822 2675 chrX 18644995 18645043 chrX 18645119 18645171 17 128 2.0 5.0 3.5 3.8 176 chrX 18644995 intron Rip11 - chrX 18645083 intron Rip11 - chrX 18645171 intron Rip11 - chrX_17_18645001 chrX_18645001 RAL-822 2676 chrX 18671208 18671241 chrX 18671325 18671352 6 115 2.0 4.0 3.0 1.5 144 chrX 18671208 intergenic not near genes chrX 18671280 intergenic not near genes chrX 18671352 intergenic not near genes chrX_6_18670001 chrX_18670001 RAL-822 2677 chrX 18698813 18698878 chrX 18698965 18699030 16 146 4.5 4.5 4.5 2.9 217 chrX 18698813 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699030 intergenic not near genes chrX_16_18695001 chrX_18695001 RAL-822 2678 chrX 18896492 18896509 chrX 18896634 18896655 6 144 7.5 4.0 5.8 0.9 163 chrX 18896492 3` UTR CG7349 + chrX 18896574 3` UTR CG7349 + chrX 18896655 intergenic CG7349 + chrX_6_18895001 chrX_18895001 RAL-822 2679 chrX 18896511 18896541 chrX 18896631 18896687 7 136 2.5 3.5 3.0 1.8 176 chrX 18896511 3` UTR CG7349 + chrX 18896599 intergenic CG7349 + chrX 18896687 intergenic CG7349 + chrX_7_18895001 chrX_18895001 RAL-822 2680 chrX 18926515 18926520 chrX 18926635 18926647 5 126 0.5 0.0 0.2 4.2 132 chrX 18926515 intergenic not near genes chrX 18926581 intergenic not near genes chrX 18926647 intergenic not near genes chrX_5_18925001 chrX_18925001 RAL-822 2681 chrX 18946165 18946174 chrX 18946287 18946296 4 122 2.5 3.0 2.8 1.1 131 chrX 18946165 intron CG43759 + chrX 18946230 intron CG43759 + chrX 18946296 intron CG43759 + chrX_4_18945001 chrX_18945001 RAL-822 2682 chrX 18947475 18947531 chrX 18947599 18947659 14 122 1.5 2.0 1.8 5.0 184 chrX 18947475 intron CG43759 + chrX 18947567 intron CG43759 + chrX 18947659 intron CG43759 + chrX_14_18945001 chrX_18945001 RAL-822 2683 chrX 18957047 18957094 chrX 18965735 18965792 roo 10 8693 4.0 4.0 4.0 2.0 8745 chrX 18957047 intron CG43759 + chrX 18961420 intron CG43759 + chrX 18965792 intron CG43759 + chrX_10_18960001 chrX_18960001 RAL-822 2684 chrX 19060383 19060434 chrX 19065197 19065253 Doc 12 4815 2.5 4.0 3.2 2.9 4870 chrX 19060383 intron CG14190 + chrX 19062818 intron CG14190 + chrX 19065253 intron CG14190 + chrX_12_19060001 chrX_19060001 RAL-822 2685 chrX 19124423 19124462 chrX 19124541 19124586 6 122 1.5 6.5 4.0 1.2 163 chrX 19124423 intergenic CG15882 - chrX 19124504 intergenic CG15882 -,tgy - chrX 19124586 intergenic CG15882 -,tgy - chrX_6_19120001 chrX_19120001 RAL-822 2686 chrX 19125662 19125680 chrX 19125826 19125844 7 160 5.5 4.0 4.8 1.2 182 chrX 19125662 intron tgy - chrX 19125753 intron tgy - chrX 19125844 intron tgy - chrX_7_19125001 chrX_19125001 RAL-822 2687 chrX 19125684 19125721 chrX 19125819 19125878 12 147 1.5 3.0 2.2 3.8 194 chrX 19125684 intron tgy - chrX 19125781 intron tgy - chrX 19125878 intron tgy - chrX_12_19125001 chrX_19125001 RAL-822 2688 chrX 19176182 19176224 chrX 19176301 19176320 7 105 5.0 1.0 3.0 1.8 138 chrX 19176182 3` UTR CG7556 - chrX 19176251 3` UTR CG7556 - chrX 19176320 3` UTR CG7556 - chrX_7_19175001 chrX_19175001 RAL-822 2689 chrX 19280994 19281025 chrX 19281138 19281161 6 153 0.0 0.5 0.2 5.0 167 chrX 19280994 intergenic CG8034 - chrX 19281078 intergenic CG8034 - chrX 19281161 intergenic CG8034 - chrX_6_19280001 chrX_19280001 RAL-822 2690 chrX 19339738 19339772 chrX 19339849 19339883 10 110 0.0 2.5 1.2 4.5 145 chrX 19339738 intron nAChRalpha7 - chrX 19339810 intron nAChRalpha7 - chrX 19339883 intron nAChRalpha7 - chrX_10_19335001 chrX_19335001 RAL-822 2691 chrX 19356965 19356976 chrX 19358441 19358452 NOF 4 1476 6.0 1.5 3.8 0.8 1487 chrX 19356965 intron kek5 + chrX 19357708 intron kek5 + chrX 19358452 intron kek5 + chrX_4_19355001 chrX_19355001 RAL-822 2692 chrX 19356985 19357023 chrX 19358436 19358443 NOF 8 1476 4.0 1.5 2.8 2.1 1458 chrX 19356985 intron kek5 + chrX 19357714 intron kek5 + chrX 19358443 intron kek5 + chrX_8_19355001 chrX_19355001 RAL-822 2693 chrX 19380147 19380183 chrX 19380397 19380454 pogo 10 266 4.0 1.5 2.8 2.6 307 chrX 19380147 intron kek5 + chrX 19380300 intron kek5 + chrX 19380454 intron kek5 + chrX_10_19380001 chrX_19380001 RAL-822 2694 chrX 19461110 19461174 chrX 19461241 19461268 6 114 5.5 4.5 5.0 1.0 158 chrX 19461110 intron kek5 + chrX 19461189 intron kek5 + chrX 19461268 intron kek5 + chrX_6_19460001 chrX_19460001 RAL-822 2695 chrX 19472115 19472157 chrX 19472698 19472745 jockey 6 577 0.0 2.0 1.0 3.0 630 chrX 19472115 intergenic kek5 + chrX 19472430 intergenic not near genes chrX 19472745 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-822 2696 chrX 19541409 19541416 chrX 19541509 19541512 4 104 3.0 1.5 2.2 1.2 103 chrX 19541409 intron CG32532 - chrX 19541460 intron CG32532 - chrX 19541512 intron CG32532 - chrX_4_19540001 chrX_19540001 RAL-822 2697 chrX 19542109 19542162 chrX 19542232 19542284 13 125 1.5 0.5 1.0 6.5 175 chrX 19542109 intron CG32532 - chrX 19542196 intron CG32532 - chrX 19542284 intron CG32532 - chrX_13_19540001 chrX_19540001 RAL-822 2698 chrX 19576558 19576591 chrX 19576636 19576680 5 85 3.5 1.5 2.5 1.4 122 chrX 19576558 intron Tao - chrX 19576619 intron Tao - chrX 19576680 intron Tao - chrX_5_19575001 chrX_19575001 RAL-822 2699 chrX 19593914 19593970 chrX 19594034 19594080 5 117 5.0 1.5 3.2 1.2 166 chrX 19593914 exon CG14205 + chrX 19593997 intron CG14205 + chrX 19594080 exon CG14205 + chrX_5_19590001 chrX_19590001 RAL-822 2700 chrX 19595703 19595741 chrX 19595822 19595865 17 122 7.0 3.0 5.0 2.8 162 chrX 19595703 intergenic CG14205 + chrX 19595784 intergenic CG14205 + chrX 19595865 intergenic CG14205 + chrX_17_19595001 chrX_19595001 RAL-822 2701 chrX 19662003 19662049 chrX 19662254 19662307 6 254 7.0 4.0 5.5 0.9 304 chrX 19662003 intron CG14223 - chrX 19662155 intron CG14223 - chrX 19662307 intron CG14223 - chrX_6_19660001 chrX_19660001 RAL-822 2702 chrX 19689392 19689421 chrX 19689499 19689529 8 108 4.5 5.5 5.0 1.3 137 chrX 19689392 intergenic Mer -,CG14227 - chrX 19689460 intergenic Mer - chrX 19689529 intergenic Mer - chrX_8_19685001 chrX_19685001 RAL-822 2703 chrX 19693735 19693769 chrX 19693850 19693873 13 117 6.5 0.0 3.2 3.1 138 chrX 19693735 intergenic Mer -,CG14229 - chrX 19693804 intergenic CG14229 -,Mer - chrX 19693873 intergenic CG14229 -,Mer - chrX_13_19690001 chrX_19690001 RAL-822 2704 chrX 19710065 19710102 chrX 19711860 19711894 S-element 5 1802 0.0 4.5 2.2 1.6 1829 chrX 19710065 intron meso18E - chrX 19710980 intron meso18E - chrX 19711894 intron meso18E - chrX_5_19710001 chrX_19710001 RAL-822 2705 chrX 19762553 19762579 chrX 19762668 19762678 8 109 6.5 2.0 4.2 1.5 125 chrX 19762553 5` UTR CG12702 - chrX 19762616 5` UTR CG12702 - chrX 19762678 5` UTR CG12702 - chrX_8_19760001 chrX_19760001 RAL-822 2706 chrX 19791231 19791255 chrX 19791356 19791384 5 126 6.5 3.5 5.0 0.8 153 chrX 19791231 intergenic not near genes chrX 19791308 intergenic not near genes chrX 19791384 intergenic not near genes chrX_5_19790001 chrX_19790001 RAL-822 2707 chrX 19791256 19791287 chrX 19791354 19791415 5 104 3.0 3.5 3.2 1.2 159 chrX 19791256 intergenic not near genes chrX 19791336 intergenic not near genes chrX 19791415 intergenic not near genes chrX_5_19790001 chrX_19790001 RAL-822 2708 chrX 19881439 19881476 chrX 19881534 19881592 12 105 5.5 2.0 3.8 2.5 153 chrX 19881439 intron Hers + chrX 19881516 intron Hers + chrX 19881592 intron Hers + chrX_12_19880001 chrX_19880001 RAL-822 2709 chrX 19883735 19883773 chrX 19883855 19883873 9 110 5.0 3.0 4.0 1.8 138 chrX 19883735 intron Hers + chrX 19883804 intron Hers + chrX 19883873 intron Hers + chrX_9_19880001 chrX_19880001 RAL-822 2710 chrX 19883775 19883787 chrX 19883852 19883907 6 96 4.5 3.0 3.8 1.2 132 chrX 19883775 intron Hers + chrX 19883841 intron Hers + chrX 19883907 intron Hers + chrX_6_19880001 chrX_19880001 RAL-822 2711 chrX 19893734 19893768 chrX 19893911 19893922 8 174 0.5 3.5 2.0 2.7 188 chrX 19893734 intron Hers + chrX 19893828 intron Hers + chrX 19893922 intron Hers + chrX_8_19890001 chrX_19890001 RAL-822 2712 chrX 19975804 19975824 chrX 19976060 19976091 5 263 2.0 4.0 3.0 1.2 287 chrX 19975804 intergenic not near genes chrX 19975948 intergenic not near genes chrX 19976091 intergenic not near genes chrX_5_19975001 chrX_19975001 RAL-822 2713 chrX 19983868 19983886 chrX 19983961 19983996 6 102 0.0 2.5 1.2 2.7 128 chrX 19983868 intergenic not near genes chrX 19983932 intergenic not near genes chrX 19983996 intergenic not near genes chrX_6_19980001 chrX_19980001 RAL-822 2714 chrX 20041497 20041558 chrX 20041612 20041672 15 112 1.5 3.0 2.2 4.7 175 chrX 20041497 intron Dop2R - chrX 20041584 intron Dop2R - chrX 20041672 intron Dop2R - chrX_15_20040001 chrX_20040001 RAL-822 2715 chrX 20057159 20057163 chrX 20057208 20057229 4 56 0.5 2.0 1.2 1.8 70 chrX 20057159 intron Dop2R - chrX 20057194 intron Dop2R - chrX 20057229 intron Dop2R - chrX_4_20055001 chrX_20055001 RAL-822 2716 chrX 20081017 20081196 chrX 20081156 20081320 4 128 0.0 0.0 0.0 4.0 303 chrX 20081017 intergenic not near genes chrX 20081168 intergenic not near genes chrX 20081320 intergenic not near genes chrX_4_20080001 chrX_20080001 RAL-822 2717 chrX 20124060 20124091 chrX 20124229 20124244 6 165 5.5 3.0 4.2 1.2 184 chrX 20124060 intron CG34331 + chrX 20124152 intron CG34331 + chrX 20124244 intron CG34331 + chrX_6_20120001 chrX_20120001 RAL-822 2718 chrX 20271469 20271508 chrX 20271596 20271634 5 117 4.0 0.0 2.0 1.7 165 chrX 20271469 intergenic not near genes chrX 20271552 intergenic not near genes chrX 20271634 intergenic not near genes chrX_5_20270001 chrX_20270001 RAL-822 2719 chrX 20312862 20312885 chrX 20312966 20312986 5 104 2.0 2.5 2.2 1.6 124 chrX 20312862 intron CG1504 - chrX 20312924 intron CG1504 - chrX 20312986 intron CG1504 - chrX_5_20310001 chrX_20310001 RAL-822 2720 chrX 20312888 20312911 chrX 20312961 20312975 4 78 0.0 2.0 1.0 2.0 87 chrX 20312888 intron CG1504 - chrX 20312932 intron CG1504 - chrX 20312975 intron CG1504 - chrX_4_20310001 chrX_20310001 RAL-822 2721 chrX 20320265 20320306 chrX 20320376 20320417 7 102 3.5 7.0 5.2 1.1 152 chrX 20320265 intron CG1504 - chrX 20320341 intron CG1504 - chrX 20320417 intron CG1504 - chrX_7_20320001 chrX_20320001 RAL-822 2722 chrX 20344896 20344928 chrX 20345060 20345062 6 158 4.0 0.5 2.2 1.9 166 chrX 20344896 intergenic not near genes chrX 20344979 intergenic not near genes chrX 20345062 intergenic not near genes chrX_6_20340001 chrX_20340001 RAL-822 2723 chrX 20369300 20369337 chrX 20369419 20369456 10 115 1.0 3.5 2.2 3.1 156 chrX 20369300 intergenic not near genes chrX 20369378 intergenic not near genes chrX 20369456 intergenic not near genes chrX_10_20365001 chrX_20365001 RAL-822 2724 chrX 20377334 20377349 chrX 20378793 20378818 hobo 5 1469 3.0 3.5 3.2 1.2 1484 chrX 20377334 intergenic not near genes chrX 20378076 intergenic not near genes chrX 20378818 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-822 2725 chrX 20384246 20384260 chrX 20384342 20384373 4 106 6.5 1.0 3.8 0.8 127 chrX 20384246 intergenic not near genes chrX 20384310 intergenic not near genes chrX 20384373 intergenic not near genes chrX_4_20380001 chrX_20380001 RAL-822 2726 chrX 20448413 20448467 chrX 20448521 20448574 4 113 2.0 0.5 1.2 1.8 161 chrX 20448413 intergenic not near genes chrX 20448494 intergenic not near genes chrX 20448574 intergenic not near genes chrX_4_20445001 chrX_20445001 RAL-822 2727 chrX 20467980 20468016 chrX 20468101 20468135 7 121 9.0 0.0 4.5 1.3 155 chrX 20467980 intron GstT3 + chrX 20468058 intron GstT3 + chrX 20468135 intron GstT3 + chrX_7_20465001 chrX_20465001 RAL-822 2728 chrX 20493877 20493929 chrX 20494071 20494113 6 190 0.0 2.5 1.2 2.7 236 chrX 20493877 intron RhoGAP19D - chrX 20493995 intron RhoGAP19D - chrX 20494113 intron RhoGAP19D - chrX_6_20490001 chrX_20490001 RAL-822 2729 chrX 20504101 20504152 chrX 20505657 20505660 transib2 8 1534 5.5 2.0 3.8 1.7 1559 chrX 20504101 intron RhoGAP19D - chrX 20504880 intron RhoGAP19D - chrX 20505660 intron RhoGAP19D - chrX_8_20500001 chrX_20500001 RAL-822 2730 chrX 20528587 20528604 chrX 20528963 20528987 7 381 5.5 6.5 6.0 1.0 400 chrX 20528587 intergenic not near genes chrX 20528787 intergenic not near genes chrX 20528987 intergenic not near genes chrX_7_20525001 chrX_20525001 RAL-822 2731 chrX 20528606 20528627 chrX 20528960 20528967 9 372 2.5 6.5 4.5 1.6 361 chrX 20528606 intergenic not near genes chrX 20528786 intergenic not near genes chrX 20528967 intergenic not near genes chrX_9_20525001 chrX_20525001 RAL-822 2732 chrX 20531659 20531683 chrX 20531784 20531808 10 122 0.5 5.0 2.8 2.6 149 chrX 20531659 intergenic not near genes chrX 20531734 intergenic not near genes chrX 20531808 intergenic not near genes chrX_10_20530001 chrX_20530001 RAL-822 2733 chrX 20575140 20575174 chrX 20575238 20575282 6 101 3.5 1.0 2.2 1.9 142 chrX 20575140 intergenic CG42580 + chrX 20575211 intergenic not near genes chrX 20575282 intergenic not near genes chrX_6_20575001 chrX_20575001 RAL-822 2734 chrX 20635408 20635443 chrX 20635602 20635644 12 196 1.5 5.5 3.5 2.7 236 chrX 20635408 intergenic not near genes chrX 20635526 intergenic not near genes chrX 20635644 intergenic not near genes chrX_12_20635001 chrX_20635001 RAL-822 2735 chrX 20710410 20710440 chrX 20710522 20710552 9 110 2.0 3.0 2.5 2.6 142 chrX 20710410 intergenic not near genes chrX 20710481 intergenic not near genes chrX 20710552 intergenic not near genes chrX_9_20710001 chrX_20710001 RAL-822 2736 chrX 20783974 20784027 chrX 20784121 20784174 13 143 1.5 1.5 1.5 5.2 200 chrX 20783974 intron shakB - chrX 20784074 intron shakB - chrX 20784174 intron shakB - chrX_13_20780001 chrX_20780001 RAL-822 2737 chrX 20836704 20836757 chrX 20844326 20844379 roo 11 7626 2.0 3.0 2.5 3.1 7675 chrX 20836704 intron shakB - chrX 20840542 intron shakB - chrX 20844379 intron shakB - chrX_11_20840001 chrX_20840001 RAL-822 2738 chrX 20940690 20940734 chrX 20942194 20942218 hobo 18 1496 3.5 3.0 3.2 4.3 1528 chrX 20940690 intergenic not near genes chrX 20941454 intergenic not near genes chrX 20942218 intergenic not near genes chrX_18_20940001 chrX_20940001 RAL-822 2739 chrX 20947649 20947695 chrX 20948513 20948563 6 868 0.0 3.0 1.5 2.4 914 chrX 20947649 intergenic not near genes chrX 20948106 intergenic not near genes chrX 20948563 intergenic not near genes chrX_6_20945001 chrX_20945001 RAL-822 2740 chrX 20981001 20981049 chrX 20981132 20981187 6 134 4.5 2.0 3.2 1.4 186 chrX 20981001 intergenic not near genes chrX 20981094 intergenic not near genes chrX 20981187 intergenic not near genes chrX_6_20980001 chrX_20980001 RAL-822 2741 chrX 21008623 21008691 chrX 21008746 21008814 13 120 3.5 4.5 4.0 2.6 191 chrX 21008623 intergenic not near genes chrX 21008718 intergenic not near genes chrX 21008814 intergenic not near genes chrX_13_21005001 chrX_21005001 RAL-822 2742 chrX 21009820 21009827 chrX 21009963 21009970 4 142 4.5 5.0 4.8 0.7 150 chrX 21009820 intergenic not near genes chrX 21009895 intergenic not near genes chrX 21009970 intergenic not near genes chrX_4_21005001 chrX_21005001 RAL-822 2743 chrX 21029799 21029809 chrX 21029939 21029985 9 167 2.5 2.5 2.5 2.6 186 chrX 21029799 3` UTR CG1529 - chrX 21029892 3` UTR CG1529 - chrX 21029985 3` UTR CG1529 - chrX_9_21025001 chrX_21025001 RAL-822 2744 chrX 21061845 21061889 chrX 21062355 21062384 roo 8 512 3.5 2.5 3.0 2.0 539 chrX 21061845 intron bves + chrX 21062114 intron bves + chrX 21062384 intron,3` UTR bves +,CG32512 - chrX_8_21060001 chrX_21060001 RAL-822 2745 chrX 21078763 21078768 chrX 21078851 21078869 4 101 10.5 0.0 5.2 0.6 106 chrX 21078763 intron bves + chrX 21078816 intron bves + chrX 21078869 intron bves + chrX_4_21075001 chrX_21075001 RAL-822 2746 chrX 21086116 21086161 chrX 21087158 21087218 jockey 7 1054 3.5 5.0 4.2 1.3 1102 chrX 21086116 intergenic not near genes chrX 21086667 intergenic not near genes chrX 21087218 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-822 2747 chrX 21166110 21166165 chrX 21166223 21166281 6 111 2.0 3.5 2.8 1.6 171 chrX 21166110 intergenic not near genes chrX 21166196 intergenic not near genes chrX 21166281 intergenic not near genes chrX_6_21165001 chrX_21165001 RAL-822 2748 chrX 21308885 21308908 chrX 21308982 21309046 6 130 1.0 0.0 0.5 4.0 161 chrX 21308885 exon CG1801 - chrX 21308966 intron CG1801 - chrX 21309046 intron CG1801 - chrX_6_21305001 chrX_21305001 RAL-822 2749 chrX 21311625 21311670 chrX 21311761 21311806 10 131 4.5 1.0 2.8 2.6 181 chrX 21311625 intron CG1801 - chrX 21311716 intron CG1801 - chrX 21311806 intron CG1801 - chrX_10_21310001 chrX_21310001 RAL-822 2750 chrX 21388356 21388407 chrX 21388547 21388574 10 181 3.0 3.5 3.2 2.4 218 chrX 21388356 intergenic Hlc - chrX 21388465 intergenic not near genes chrX 21388574 intergenic mst + chrX_10_21385001 chrX_21385001 RAL-822 2751 chrX 21410640 21410670 chrX 21410739 21410780 5 109 0.0 3.5 1.8 1.8 140 chrX 21410640 intergenic CR45003 - chrX 21410710 intergenic CR45003 - chrX 21410780 intergenic CR45003 - chrX_5_21410001 chrX_21410001 RAL-822 2752 chrX 21458671 21458721 chrX 21464138 21464161 Ivk 7 5457 8.0 4.0 6.0 1.0 5490 chrX 21458671 intergenic not near genes chrX 21461416 intergenic not near genes chrX 21464161 intergenic not near genes chrX_7_21460001 chrX_21460001 RAL-822 2753 chrX 21516989 21517019 chrX 21517069 21517103 10 86 4.0 5.0 4.5 1.8 114 chrX 21516989 intron CR45082 - chrX 21517046 intron CR45082 - chrX 21517103 intron CR45082 - chrX_10_21515001 chrX_21515001 RAL-822 2754 chrX 21595559 21595575 chrX 21598648 21598664 micropia 5 3086 9.0 9.5 9.2 0.5 3105 chrX 21595559 intergenic not near genes chrX 21597112 intergenic not near genes chrX 21598664 intergenic not near genes chrX_5_21595001 chrX_21595001 RAL-822 2755 chrX 21668234 21668259 chrX 21668354 21668368 5 115 36.0 33.0 34.5 0.1 134 chrX 21668234 intergenic not near genes chrX 21668301 intergenic not near genes chrX 21668368 intergenic not near genes chrX_5_21665001 chrX_21665001 RAL-822 2756 chrX 21668263 21668287 chrX 21668351 21668390 9 108 32.0 32.5 32.2 0.3 127 chrX 21668263 intergenic not near genes chrX 21668326 intergenic not near genes chrX 21668390 intergenic not near genes chrX_9_21665001 chrX_21665001 RAL-822 2757 chrX 22478886 22478893 chrX 22479042 22479046 4 160 0.0 1.5 0.8 2.2 160 chrX 22478886 intron CG12576 - chrX 22478966 intron CG12576 - chrX 22479046 intron CG12576 - chrX_4_22475001 chrX_22475001 RAL-822 2758 chrX 22486935 22486946 chrX 22487048 22487049 4 110 2.0 2.0 2.0 1.3 114 chrX 22486935 intron Cp110 + chrX 22486992 intron Cp110 + chrX 22487049 intron Cp110 + chrX_4_22485001 chrX_22485001 RAL-822 2759 chrX 22522603 22522656 chrX 22525458 22525458 NOF 10 2841 4.0 1.0 2.5 2.9 2855 chrX 22522603 intron CG17600 + chrX 22524030 intron CG17600 + chrX 22525458 intron CG17600 + chrX_10_22520001 chrX_22520001 RAL-822 2760 chrX 22637516 22637549 chrX 22637622 22637645 4 106 3.0 0.0 1.5 1.6 129 chrX 22637516 intergenic not near genes chrX 22637580 intergenic not near genes chrX 22637645 intergenic not near genes chrX_4_22635001 chrX_22635001 RAL-822 2761 chrX 22646506 22646517 chrX 22646632 22646648 4 130 3.0 0.0 1.5 1.6 142 chrX 22646506 intergenic not near genes chrX 22646577 intergenic not near genes chrX 22646648 intergenic not near genes chrX_4_22645001 chrX_22645001 RAL-822 2762 chrX 22677275 22677315 chrX 22677504 22677559 12 234 3.0 2.5 2.8 3.2 284 chrX 22677275 intron CR44997 + chrX 22677417 intron CR44997 + chrX 22677559 intron CR44997 + chrX_12_22675001 chrX_22675001 RAL-822 2763 chrX 22694312 22694352 chrX 22694416 22694463 4 117 2.0 0.5 1.2 1.8 151 chrX 22694312 intron CR44997 + chrX 22694388 intron CR44997 + chrX 22694463 intron CR44997 + chrX_4_22690001 chrX_22690001 RAL-822 2764 chrX 22697468 22697521 chrX 22701800 22701852 Juan 11 4329 8.0 5.5 6.8 1.4 4384 chrX 22697468 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701852 intron CR44997 + chrX_11_22695001 chrX_22695001 RAL-822 2765 chrX 22764350 22764398 chrX 22764470 22764529 14 124 3.5 5.0 4.2 2.7 179 chrX 22764350 intron CR44997 + chrX 22764440 intron CR44997 + chrX 22764529 intron,3` UTR CR44997 +,CR44109 - chrX_14_22760001 chrX_22760001 RAL-822 2766 chrX 22811974 22812005 chrX 22816778 22816800 F-element 10 4803 6.5 6.5 6.5 1.3 4826 chrX 22811974 intergenic CG12446 - chrX 22814387 intergenic not near genes chrX 22816800 intergenic not near genes chrX_10_22810001 chrX_22810001 RAL-822 2767 chrX 22824223 22824444 chrX 22824369 22824584 21 157 4.5 4.5 4.5 3.8 361 chrX 22824223 intergenic fog - chrX 22824404 3` UTR fog - chrX 22824584 3` UTR fog - chrX_21_22820001 chrX_22820001 RAL-822 2768 chrX 22867962 22867998 chrX 22868091 22868154 7 141 1.0 1.0 1.0 3.5 192 chrX 22867962 exon CG42346 + chrX 22868058 intron CG42346 + chrX 22868154 intron CG42346 + chrX_7_22865001 chrX_22865001 RAL-822 2769 chrX 22987080 22987127 chrX 22989763 22989792 Burdock 9 2680 5.0 2.0 3.5 2.0 2712 chrX 22987080 intron,intron stnA -,stnB - chrX 22988436 intron,intron stnA -,stnB - chrX 22989792 intron,intron stnA -,stnB - chrX_9_22985001 chrX_22985001 RAL-822 2770 chrX 22996278 22996333 chrX 23003547 23003601 roo 15 7263 3.0 6.0 4.5 2.7 7323 chrX 22996278 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003601 intron,intron stnA -,stnB - chrX_15_22995001 chrX_22995001 RAL-822 2771 chrX 23036352 23036402 chrX 23037788 23037823 pogo 7 1433 4.5 4.0 4.2 1.3 1471 chrX 23036352 intron CG12061 + chrX 23037088 intron CG12061 + chrX 23037823 intron CG12061 + chrX_7_23035001 chrX_23035001 RAL-822 2772 chrY 864699 864742 chrY 864806 864853 5 104 16.0 14.0 15.0 0.3 154 chrY 864699 intergenic not near genes chrY 864776 intergenic not near genes chrY 864853 intergenic not near genes chrY_5_860001 chrY_860001 RAL-822 2773 chrY 1420640 1420652 chrY 1420751 1420758 4 110 10.0 11.0 10.5 0.3 118 chrY 1420640 intergenic not near genes chrY 1420699 intergenic not near genes chrY 1420758 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-822