SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
3	chr2L	47440	47452	chr2L	52570	52582	jockey	13	5129	29.5	12.0	20.8	0.6	5142	chr2L	47440	intron	Cda5 -	chr2L	50011	intron	Cda5 -	chr2L	52582	intron	Cda5 -	chr2L_13_50001	chr2L_50001	RAL-821_100b
4	chr2L	47453	47488	chr2L	52569	52608	jockey	29	5128	17.5	11.5	14.5	1.9	5155	chr2L	47453	intron	Cda5 -	chr2L	50030	intron	Cda5 -	chr2L	52608	intron	Cda5 -	chr2L_29_50001	chr2L_50001	RAL-821_100b
19	chr2L	347859	347916	chr2L	355384	355441	blood	28	7521	7.5	3.0	5.2	4.5	7582	chr2L	347859	3` UTR	Plc21C +	chr2L	351650	intron	Plc21C +	chr2L	355441	3` UTR	Plc21C +	chr2L_28_350001	chr2L_350001	RAL-821_100b
25	chr2L	686915	686923	chr2L	695975	695988	roo	7	9063	24.0	13.5	18.8	0.4	9073	chr2L	686915	intron	ds -	chr2L	691452	intron	ds -	chr2L	695988	intron	ds -	chr2L_7_690001	chr2L_690001	RAL-821_100b
26	chr2L	686927	686946	chr2L	695957	696011	roo	19	9061	15.5	10.5	13.0	1.4	9084	chr2L	686927	intron	ds -	chr2L	691469	intron	ds -	chr2L	696011	intron	ds -	chr2L_19_690001	chr2L_690001	RAL-821_100b
27	chr2L	770441	770493	chr2L	772244	772294	Bari1	37	1799	9.0	11.5	10.2	3.3	1853	chr2L	770441	intergenic	not near genes	chr2L	771368	intergenic	not near genes	chr2L	772294	intergenic	CR44614 +	chr2L_37_770001	chr2L_770001	RAL-821_100b
35	chr2L	976858	976865	chr2L	984518	984526	roo	5	7660	28.5	10.0	19.2	0.2	7668	chr2L	976858	intergenic	not near genes	chr2L	980692	intergenic	not near genes	chr2L	984526	intergenic	not near genes	chr2L_5_980001	chr2L_980001	RAL-821_100b
36	chr2L	976866	976910	chr2L	984516	984561	roo	34	7655	13.5	9.5	11.5	2.7	7695	chr2L	976866	intergenic	not near genes	chr2L	980714	intergenic	not near genes	chr2L	984561	intergenic	not near genes	chr2L_34_980001	chr2L_980001	RAL-821_100b
37	chr2L	996705	996738	chr2L	1005825	1005858	roo	16	9119	13.0	11.5	12.2	1.2	9153	chr2L	996705	intergenic	not near genes	chr2L	1001282	intergenic	not near genes	chr2L	1005858	intergenic	not near genes	chr2L_16_1000001	chr2L_1000001	RAL-821_100b
38	chr2L	996740	996748	chr2L	1005818	1005868	roo	4	9110	10.5	10.0	10.2	0.4	9128	chr2L	996740	intergenic	not near genes	chr2L	1001304	intergenic	not near genes	chr2L	1005868	intergenic	not near genes	chr2L_4_1000001	chr2L_1000001	RAL-821_100b
45	chr2L	1220110	1220145	chr2L	1227601	1227636	blood	25	7490	16.5	10.5	13.5	1.7	7526	chr2L	1220110	intron	CG42329 +	chr2L	1223873	intron	CG42329 +	chr2L	1227636	intron	CG42329 +	chr2L_25_1220001	chr2L_1220001	RAL-821_100b
46	chr2L	1220150	1220160	chr2L	1227600	1227651	blood	9	7479	11.5	10.5	11.0	0.8	7501	chr2L	1220150	intron	CG42329 +	chr2L	1223900	intron	CG42329 +	chr2L	1227651	intron	CG42329 +	chr2L_9_1220001	chr2L_1220001	RAL-821_100b
48	chr2L	1301751	1301785	chr2L	1302308	1302367	gypsy	7	576	0.0	0.5	0.2	5.8	616	chr2L	1301751	intergenic	not near genes	chr2L	1302059	intergenic	not near genes	chr2L	1302367	intergenic	not near genes	chr2L_7_1300001	chr2L_1300001	RAL-821_100b
52	chr2L	1570673	1570707	chr2L	1573570	1573604	F-element	30	2896	11.0	9.5	10.2	2.7	2931	chr2L	1570673	intron	haf +	chr2L	1572138	intron	haf +	chr2L	1573604	intron	haf +	chr2L_30_1570001	chr2L_1570001	RAL-821_100b
55	chr2L	1678933	1679004	chr2L	1686441	1686474	blood	23	7500	1.5	10.0	5.8	3.4	7541	chr2L	1678933	intron	chinmo +	chr2L	1682704	intron	chinmo +	chr2L	1686474	intron	chinmo +	chr2L_23_1680001	chr2L_1680001	RAL-821_100b
56	chr2L	1711343	1711350	chr2L	1711685	1711699	mdg3	8	347	29.5	15.5	22.5	0.3	356	chr2L	1711343	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711521	3` UTR	frtz -	chr2L	1711699	3` UTR	frtz -	chr2L_8_1710001	chr2L_1710001	RAL-821_100b
57	chr2L	1711364	1711367	chr2L	1711703	1711716	mdg3	5	346	21.0	22.0	21.5	0.2	352	chr2L	1711364	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711540	3` UTR	frtz -	chr2L	1711716	3` UTR	frtz -	chr2L_5_1710001	chr2L_1710001	RAL-821_100b
58	chr2L	1711368	1711385	chr2L	1711701	1711734	mdg3	18	345	13.0	21.5	17.2	1.0	366	chr2L	1711368	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711551	3` UTR	frtz -	chr2L	1711734	3` UTR	frtz -	chr2L_18_1710001	chr2L_1710001	RAL-821_100b
74	chr2L	2100375	2100404	chr2L	2109541	2109552	roo	23	9168	18.0	26.0	22.0	1.0	9177	chr2L	2100375	intron	dpr3 -	chr2L	2104964	intron	dpr3 -	chr2L	2109552	intron	dpr3 -	chr2L_23_2100001	chr2L_2100001	RAL-821_100b
75	chr2L	2112086	2112146	chr2L	2119773	2119782	opus	27	7659	4.0	12.5	8.2	2.9	7696	chr2L	2112086	intergenic	not near genes	chr2L	2115934	intergenic	not near genes	chr2L	2119782	intergenic	not near genes	chr2L_27_2115001	chr2L_2115001	RAL-821_100b
80	chr2L	2294041	2294050	chr2L	2299251	2299280	copia	6	5220	12.5	12.0	12.2	0.5	5239	chr2L	2294041	intergenic	not near genes	chr2L	2296660	intergenic	not near genes	chr2L	2299280	intergenic	not near genes	chr2L_6_2295001	chr2L_2295001	RAL-821_100b
81	chr2L	2294052	2294075	chr2L	2299246	2299285	copia	15	5219	6.0	9.0	7.5	1.8	5233	chr2L	2294052	intergenic	not near genes	chr2L	2296668	intergenic	not near genes	chr2L	2299285	intergenic	not near genes	chr2L_15_2295001	chr2L_2295001	RAL-821_100b
93	chr2L	2565531	2565562	chr2L	2571629	2571660	297	26	6095	15.0	17.0	16.0	1.5	6129	chr2L	2565531	exon	Cyp309a2 -	chr2L	2568596	intron	Cyp309a2 -	chr2L	2571660	exon	Cyp309a2 -	chr2L_26_2565001	chr2L_2565001	RAL-821_100b
97	chr2L	2661180	2661218	chr2L	2663043	2663075	I-element	15	1855	9.5	15.0	12.2	1.1	1895	chr2L	2661180	intergenic	not near genes	chr2L	2662128	intergenic	not near genes	chr2L	2663075	intergenic	not near genes	chr2L_15_2660001	chr2L_2660001	RAL-821_100b
98	chr2L	2661221	2661234	chr2L	2663033	2663047	I-element	23	1831	6.5	12.5	9.5	2.2	1826	chr2L	2661221	intergenic	not near genes	chr2L	2662134	intergenic	not near genes	chr2L	2663047	intergenic	not near genes	chr2L_23_2660001	chr2L_2660001	RAL-821_100b
102	chr2L	2772598	2772607	chr2L	2779195	2779214	297	10	6603	27.0	13.0	20.0	0.5	6616	chr2L	2772598	3` UTR	Syt1 -	chr2L	2775906	intron	Syt1 -	chr2L	2779214	3` UTR	Syt1 -	chr2L_10_2775001	chr2L_2775001	RAL-821_100b
103	chr2L	2772608	2772625	chr2L	2779194	2779220	297	10	6594	18.0	13.0	15.5	0.6	6612	chr2L	2772608	3` UTR	Syt1 -	chr2L	2775914	intron	Syt1 -	chr2L	2779220	3` UTR	Syt1 -	chr2L_10_2775001	chr2L_2775001	RAL-821_100b
110	chr2L	2933275	2933315	chr2L	2935479	2935518	pogo	39	2200	20.5	16.0	18.2	2.0	2243	chr2L	2933275	intron	lilli +	chr2L	2934396	intron	lilli +	chr2L	2935518	intron	lilli +	chr2L_39_2930001	chr2L_2930001	RAL-821_100b
111	chr2L	3073005	3073065	chr2L	3078233	3078243	copia	45	5224	7.5	9.5	8.5	4.7	5238	chr2L	3073005	intron	toc -	chr2L	3075624	intron	toc -	chr2L	3078243	intron	toc -	chr2L_45_3075001	chr2L_3075001	RAL-821_100b
120	chr2L	3251473	3251525	chr2L	3259063	3259115	springer	31	7589	8.5	14.0	11.2	2.5	7642	chr2L	3251473	intergenic	not near genes	chr2L	3255294	intergenic	not near genes	chr2L	3259115	intergenic	not near genes	chr2L_31_3255001	chr2L_3255001	RAL-821_100b
127	chr2L	3388574	3388592	chr2L	3388840	3388858	pogo	9	266	16.0	6.5	11.2	0.7	284	chr2L	3388574	intergenic	CG42460 -	chr2L	3388716	intergenic	CG42460 -	chr2L	3388858	intergenic	CG42460 -,CR44791 +	chr2L_9_3385001	chr2L_3385001	RAL-821_100b
128	chr2L	3388593	3388627	chr2L	3388839	3388893	pogo	14	264	8.0	6.5	7.2	1.7	300	chr2L	3388593	intergenic	CG42460 -	chr2L	3388743	intergenic	CG42460 -	chr2L	3388893	intergenic	CG42460 -,CR44791 +	chr2L_14_3385001	chr2L_3385001	RAL-821_100b
136	chr2L	3649769	3649812	chr2L	3654997	3655031	copia	17	5227	8.5	12.5	10.5	1.5	5262	chr2L	3649769	intron	for -	chr2L	3652400	intron	for -	chr2L	3655031	intron	for -	chr2L_17_3650001	chr2L_3650001	RAL-821_100b
152	chr2L	4066031	4066057	chr2L	4068869	4068907	Juan	14	2846	11.0	15.0	13.0	1.0	2876	chr2L	4066031	intron	ed +	chr2L	4067469	intron	ed +	chr2L	4068907	intron	ed +	chr2L_14_4065001	chr2L_4065001	RAL-821_100b
157	chr2L	4181297	4181302	chr2L	4183913	4183959	Burdock	4	2647	5.5	20.0	12.8	0.3	2662	chr2L	4181297	intergenic	not near genes	chr2L	4182628	intergenic	not near genes	chr2L	4183959	intergenic	not near genes	chr2L_4_4180001	chr2L_4180001	RAL-821_100b
166	chr2L	4601683	4601733	chr2L	4609149	4609194	mdg1	41	7464	9.5	8.0	8.8	4.2	7511	chr2L	4601683	intron	dp -	chr2L	4605438	intron	dp -	chr2L	4609194	intron	dp -	chr2L_41_4605001	chr2L_4605001	RAL-821_100b
167	chr2L	4661818	4661854	chr2L	4669423	4669459	opus	18	7604	7.5	18.0	12.8	1.3	7641	chr2L	4661818	intergenic	not near genes	chr2L	4665638	intergenic	not near genes	chr2L	4669459	intergenic	not near genes	chr2L_18_4665001	chr2L_4665001	RAL-821_100b
178	chr2L	4918145	4918193	chr2L	4923243	4923291	jockey	26	5098	9.0	9.5	9.2	2.5	5146	chr2L	4918145	intron	hoe1 -	chr2L	4920718	intron	hoe1 -	chr2L	4923291	intron	hoe1 -	chr2L_26_4920001	chr2L_4920001	RAL-821_100b
180	chr2L	4953489	4953541	chr2L	4953755	4953774	pogo	29	260	8.5	10.0	9.2	2.8	285	chr2L	4953489	intergenic	Jon25Bii -	chr2L	4953632	intergenic	Jon25Bii -	chr2L	4953774	intergenic	not near genes	chr2L_29_4950001	chr2L_4950001	RAL-821_100b
186	chr2L	5342748	5342796	chr2L	5345153	5345201	Doc	30	2402	7.0	6.5	6.8	3.8	2453	chr2L	5342748	intergenic	not near genes	chr2L	5343974	intergenic	not near genes	chr2L	5345201	intergenic	not near genes	chr2L_30_5340001	chr2L_5340001	RAL-821_100b
201	chr2L	5827690	5827738	chr2L	5836723	5836771	roo	30	9031	12.5	8.5	10.5	2.6	9081	chr2L	5827690	intron	TrissinR +	chr2L	5832230	intron	TrissinR +	chr2L	5836771	intron	TrissinR +	chr2L_30_5830001	chr2L_5830001	RAL-821_100b
217	chr2L	6363127	6363183	chr2L	6366078	6366103	Burdock	30	2944	9.5	11.0	10.2	2.7	2976	chr2L	6363127	intergenic	not near genes	chr2L	6364615	intergenic	not near genes	chr2L	6366103	intergenic	not near genes	chr2L_30_6360001	chr2L_6360001	RAL-821_100b
219	chr2L	6426833	6426884	chr2L	6445118	6445169	roo	40	18282	12.5	9.5	11.0	3.3	18336	chr2L	6426833	3` UTR	CG9527 -	chr2L	6436001	intron	CG9527 -	chr2L	6445169	exon	CG9527 -	chr2L_40_6435001	chr2L_6435001	RAL-821_100b
239	chr2L	6876123	6876147	chr2L	6883839	6883863	diver	10	7713	15.5	14.0	14.8	0.6	7740	chr2L	6876123	intron	Nlg2 +	chr2L	6879993	intron	Nlg2 +	chr2L	6883863	intron	Nlg2 +	chr2L_10_6875001	chr2L_6875001	RAL-821_100b
240	chr2L	6876149	6876172	chr2L	6883827	6883888	diver	23	7703	7.0	10.5	8.8	2.3	7739	chr2L	6876149	intron	Nlg2 +	chr2L	6880018	intron	Nlg2 +	chr2L	6883888	intron	Nlg2 +	chr2L_23_6880001	chr2L_6880001	RAL-821_100b
243	chr2L	6991409	6991435	chr2L	6998553	6998572	HMS-Beagle	9	7140	19.5	13.5	16.5	0.5	7163	chr2L	6991409	intron	uif -	chr2L	6994990	intron	uif -	chr2L	6998572	intron	uif -	chr2L_9_6990001	chr2L_6990001	RAL-821_100b
259	chr2L	7343301	7343356	chr2L	7350442	7350496	roo	17	7140	16.5	16.0	16.2	1.0	7195	chr2L	7343301	intron	Wnt6 +	chr2L	7346898	intron	Wnt6 +	chr2L	7350496	intron	Wnt6 +	chr2L_17_7345001	chr2L_7345001	RAL-821_100b
270	chr2L	7579170	7579211	chr2L	7579386	7579427	BS	20	216	13.0	0.0	6.5	2.7	257	chr2L	7579170	intergenic	RapGAP1 -	chr2L	7579298	intergenic	RapGAP1 -	chr2L	7579427	intergenic	RapGAP1 -	chr2L_20_7575001	chr2L_7575001	RAL-821_100b
278	chr2L	7977065	7977109	chr2L	7984066	7984110	297	19	7000	10.5	14.5	12.5	1.4	7045	chr2L	7977065	intron	Snoo -	chr2L	7980588	intron	Snoo -	chr2L	7984110	intron,5` UTR	Snoo -,CG7231 +	chr2L_19_7980001	chr2L_7980001	RAL-821_100b
282	chr2L	8013593	8013608	chr2L	8018822	8018829	copia	10	5226	24.0	0.0	12.0	0.8	5236	chr2L	8013593	intron	Tg +	chr2L	8016211	intron	Tg +	chr2L	8018829	intron	Tg +	chr2L_10_8015001	chr2L_8015001	RAL-821_100b
283	chr2L	8018816	8018836	chr2L	8023621	8023645	Doc	9	4809	0.5	13.0	6.8	1.2	4829	chr2L	8018816	intron	Tg +	chr2L	8021230	intron	Tg +	chr2L	8023645	intron	Tg +	chr2L_9_8020001	chr2L_8020001	RAL-821_100b
297	chr2L	8452398	8452445	chr2L	8461594	8461641	roo	26	9195	8.0	14.5	11.2	2.1	9243	chr2L	8452398	intron	fu12 -	chr2L	8457020	intron	fu12 -	chr2L	8461641	intron	fu12 -	chr2L_26_8455001	chr2L_8455001	RAL-821_100b
302	chr2L	8594442	8594487	chr2L	8601520	8601566	297	20	7077	12.0	8.0	10.0	1.8	7124	chr2L	8594442	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8598004	intron	Sema-1a +	chr2L	8601566	intron	Sema-1a +	chr2L_20_8595001	chr2L_8595001	RAL-821_100b
307	chr2L	8723091	8723109	chr2L	8731493	8731511	Tirant	14	8402	15.0	13.5	14.2	0.9	8420	chr2L	8723091	intron	raw -	chr2L	8727301	intron	raw -	chr2L	8731511	intron	raw -	chr2L_14_8725001	chr2L_8725001	RAL-821_100b
308	chr2L	8723110	8723140	chr2L	8731492	8731542	Tirant	27	8398	10.0	13.5	11.8	2.1	8432	chr2L	8723110	intron	raw -	chr2L	8727326	intron	raw -	chr2L	8731542	intron	raw -	chr2L_27_8725001	chr2L_8725001	RAL-821_100b
316	chr2L	9000257	9000311	chr2L	9007792	9007846	roo	15	7535	14.5	0.0	7.2	1.8	7589	chr2L	9000257	intergenic	Try29F +	chr2L	9004052	intergenic	not near genes	chr2L	9007846	intergenic	not near genes	chr2L_15_9000001	chr2L_9000001	RAL-821_100b
330	chr2L	9217944	9218002	chr2L	9222756	9222822	Doc	4	4818	7.0	0.0	3.5	0.9	4878	chr2L	9217944	intron	tai +	chr2L	9220383	intron	tai +	chr2L	9222822	intron	tai +	chr2L_4_9220001	chr2L_9220001	RAL-821_100b
342	chr2L	9393489	9393522	chr2L	9396480	9396513	jockey	8	2991	1.0	9.0	5.0	1.3	3024	chr2L	9393489	intron	Shawl -	chr2L	9395001	intron	Shawl -	chr2L	9396513	intron	Shawl -	chr2L_8_9395001	chr2L_9395001	RAL-821_100b
358	chr2L	9973701	9973759	chr2L	9980845	9980903	HMS-Beagle	51	7140	13.0	20.0	16.5	2.9	7202	chr2L	9973701	intergenic	not near genes	chr2L	9977302	intergenic	not near genes	chr2L	9980903	intergenic	not near genes	chr2L_51_9975001	chr2L_9975001	RAL-821_100b
371	chr2L	10138166	10138187	chr2L	10143437	10143444	Rt1c	13	5268	19.0	31.0	25.0	0.5	5278	chr2L	10138166	intron	CG44153 -	chr2L	10140805	intron	CG44153 -	chr2L	10143444	intron	CG44153 -	chr2L_13_10140001	chr2L_10140001	RAL-821_100b
374	chr2L	10156302	10156312	chr2L	10163797	10163807	blood	7	7495	20.5	12.5	16.5	0.4	7505	chr2L	10156302	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160054	intron	CG44153 -	chr2L	10163807	intron	CG44153 -	chr2L_7_10160001	chr2L_10160001	RAL-821_100b
375	chr2L	10156313	10156352	chr2L	10163791	10163847	blood	20	7489	10.5	10.0	10.2	1.8	7534	chr2L	10156313	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160080	intron	CG44153 -	chr2L	10163847	intron	CG44153 -	chr2L_20_10160001	chr2L_10160001	RAL-821_100b
391	chr2L	10592816	10592871	chr2L	10600503	10600558	opus	42	7686	5.0	11.5	8.2	4.6	7742	chr2L	10592816	intron	Trim9 +	chr2L	10596687	intron	Trim9 +	chr2L	10600558	intron	Trim9 +	chr2L_42_10595001	chr2L_10595001	RAL-821_100b
400	chr2L	10862840	10862869	chr2L	10864472	10864508	Rt1c	28	1631	12.5	23.0	17.8	1.5	1668	chr2L	10862840	3` UTR	CR43807 -	chr2L	10863674	intron	CR43807 -	chr2L	10864508	3` UTR	CR43807 -	chr2L_28_10860001	chr2L_10860001	RAL-821_100b
401	chr2L	10876562	10876575	chr2L	10883649	10883662	297	8	7086	9.5	2.5	6.0	1.1	7100	chr2L	10876562	intergenic	not near genes	chr2L	10880112	intergenic	not near genes	chr2L	10883662	intergenic	not near genes	chr2L_8_10880001	chr2L_10880001	RAL-821_100b
404	chr2L	10946928	10946942	chr2L	10956168	10956177	roo	10	9237	28.5	15.5	22.0	0.4	9249	chr2L	10946928	intron	dpr2 -	chr2L	10951552	intron	dpr2 -	chr2L	10956177	intron	dpr2 -	chr2L_10_10950001	chr2L_10950001	RAL-821_100b
405	chr2L	10946946	10946976	chr2L	10956166	10956203	roo	23	9234	16.5	14.5	15.5	1.4	9257	chr2L	10946946	intron	dpr2 -	chr2L	10951574	intron	dpr2 -	chr2L	10956203	intron	dpr2 -	chr2L_23_10950001	chr2L_10950001	RAL-821_100b
412	chr2L	11315245	11315272	chr2L	11317674	11317701	G2	18	2427	12.0	9.0	10.5	1.6	2456	chr2L	11315245	intergenic	not near genes	chr2L	11316473	intergenic	not near genes	chr2L	11317701	intergenic	not near genes	chr2L_18_11315001	chr2L_11315001	RAL-821_100b
429	chr2L	11540553	11540613	chr2L	11547983	11548040	Tabor	13	7427	2.5	6.5	4.5	2.4	7487	chr2L	11540553	intergenic	not near genes	chr2L	11544296	intergenic	not near genes	chr2L	11548040	intergenic	not near genes	chr2L_13_11540001	chr2L_11540001	RAL-821_100b
431	chr2L	11563618	11563632	chr2L	11568847	11568861	copia	9	5229	30.0	8.0	19.0	0.5	5243	chr2L	11563618	intergenic	not near genes	chr2L	11566240	intergenic	not near genes	chr2L	11568861	intergenic	not near genes	chr2L_9_11565001	chr2L_11565001	RAL-821_100b
432	chr2L	11563633	11563662	chr2L	11568841	11568891	copia	25	5224	15.0	6.5	10.8	2.1	5258	chr2L	11563633	intergenic	not near genes	chr2L	11566262	intergenic	not near genes	chr2L	11568891	intergenic	not near genes	chr2L_25_11565001	chr2L_11565001	RAL-821_100b
435	chr2L	11614042	11614081	chr2L	11615546	11615601	hopper2	26	1503	9.5	9.5	9.5	2.5	1559	chr2L	11614042	intron	kek2 +	chr2L	11614822	intron	kek2 +	chr2L	11615601	intron	kek2 +	chr2L_26_11610001	chr2L_11610001	RAL-821_100b
440	chr2L	11713482	11713537	chr2L	11720975	11721030	blood	36	7488	9.5	11.5	10.5	3.1	7548	chr2L	11713482	intergenic	not near genes	chr2L	11717256	intergenic	not near genes	chr2L	11721030	intergenic	CR44143 +	chr2L_36_11715001	chr2L_11715001	RAL-821_100b
455	chr2L	12067306	12067355	chr2L	12074383	12074432	297	28	7077	9.0	7.5	8.2	3.0	7126	chr2L	12067306	intergenic	not near genes	chr2L	12070869	intergenic	not near genes	chr2L	12074432	intergenic	not near genes	chr2L_28_12070001	chr2L_12070001	RAL-821_100b
478	chr2L	12558294	12558352	chr2L	12565448	12565506	HMS-Beagle	29	7151	6.5	6.0	6.2	4.0	7212	chr2L	12558294	intergenic	not near genes	chr2L	12561900	intergenic	not near genes	chr2L	12565506	intergenic	not near genes	chr2L_29_12560001	chr2L_12560001	RAL-821_100b
481	chr2L	12728900	12728925	chr2L	12729165	12729189	pogo	10	265	19.5	10.5	15.0	0.6	289	chr2L	12728900	intron	MRP +	chr2L	12729044	intron	MRP +	chr2L	12729189	exon	MRP +	chr2L_10_12725001	chr2L_12725001	RAL-821_100b
482	chr2L	12728926	12728947	chr2L	12729164	12729212	pogo	12	255	8.0	10.0	9.0	1.2	286	chr2L	12728926	intron	MRP +	chr2L	12729069	intron	MRP +	chr2L	12729212	exon	MRP +	chr2L_12_12725001	chr2L_12725001	RAL-821_100b
483	chr2L	12731034	12731088	chr2L	12735826	12735880	F-element	36	4790	8.5	13.0	10.8	3.1	4846	chr2L	12731034	intron	MRP +	chr2L	12733457	intron	MRP +	chr2L	12735880	intron	MRP +	chr2L_36_12730001	chr2L_12730001	RAL-821_100b
485	chr2L	12739156	12739161	chr2L	12743962	12743967	Doc	4	4806	27.5	15.0	21.2	0.2	4811	chr2L	12739156	exon	MRP +	chr2L	12741562	intron	MRP +	chr2L	12743967	intron	MRP +	chr2L_4_12740001	chr2L_12740001	RAL-821_100b
486	chr2L	12739162	12739182	chr2L	12743958	12743988	Doc	13	4804	22.0	14.0	18.0	0.7	4826	chr2L	12739162	exon	MRP +	chr2L	12741575	intron	MRP +	chr2L	12743988	exon	MRP +	chr2L_13_12740001	chr2L_12740001	RAL-821_100b
487	chr2L	12739183	12739201	chr2L	12743954	12743991	Doc	17	4798	14.5	12.5	13.5	1.2	4808	chr2L	12739183	exon	MRP +	chr2L	12741587	intron	MRP +	chr2L	12743991	exon	MRP +	chr2L_17_12740001	chr2L_12740001	RAL-821_100b
491	chr2L	12763805	12763870	chr2L	12764040	12764095	BS	10	231	1.0	0.0	0.5	6.7	290	chr2L	12763805	intergenic	not near genes	chr2L	12763950	intergenic	not near genes	chr2L	12764095	intergenic	not near genes	chr2L_10_12760001	chr2L_12760001	RAL-821_100b
493	chr2L	12781784	12781809	chr2L	12789250	12789284	Quasimodo	14	7472	25.0	17.0	21.0	0.6	7500	chr2L	12781784	intergenic	not near genes	chr2L	12785534	intergenic	not near genes	chr2L	12789284	intergenic	not near genes	chr2L_14_12785001	chr2L_12785001	RAL-821_100b
494	chr2L	12791586	12791599	chr2L	12795283	12795299	F-element	6	3697	16.5	13.5	15.0	0.4	3713	chr2L	12791586	intergenic	not near genes	chr2L	12793442	intergenic	not near genes	chr2L	12795299	intergenic	not near genes	chr2L_6_12790001	chr2L_12790001	RAL-821_100b
495	chr2L	12791620	12791623	chr2L	12795280	12795297	F-element	9	3677	10.5	12.0	11.2	0.7	3677	chr2L	12791620	intergenic	not near genes	chr2L	12793458	intergenic	not near genes	chr2L	12795297	intergenic	not near genes	chr2L_9_12790001	chr2L_12790001	RAL-821_100b
496	chr2L	12791624	12791626	chr2L	12795277	12795326	F-element	11	3680	10.5	11.0	10.8	0.9	3702	chr2L	12791624	intergenic	not near genes	chr2L	12793475	intergenic	not near genes	chr2L	12795326	intergenic	not near genes	chr2L_11_12790001	chr2L_12790001	RAL-821_100b
505	chr2L	12861676	12861727	chr2L	12863166	12863201	hobo	56	1486	9.5	23.0	16.2	3.3	1525	chr2L	12861676	intergenic	not near genes	chr2L	12862438	intergenic	not near genes	chr2L	12863201	intergenic	not near genes	chr2L_56_12860001	chr2L_12860001	RAL-821_100b
506	chr2L	12893995	12894049	chr2L	12895487	12895519	hobo	31	1483	14.5	24.0	19.2	1.5	1524	chr2L	12893995	intergenic	not near genes	chr2L	12894757	intergenic	not near genes	chr2L	12895519	intergenic	not near genes	chr2L_31_12890001	chr2L_12890001	RAL-821_100b
509	chr2L	12933827	12933883	chr2L	12941319	12941370	blood	38	7490	12.5	14.5	13.5	2.6	7543	chr2L	12933827	intergenic	not near genes	chr2L	12937598	intergenic	not near genes	chr2L	12941370	intergenic	not near genes	chr2L_38_12935001	chr2L_12935001	RAL-821_100b
510	chr2L	13036221	13036269	chr2L	13036487	13036536	X-element	32	265	10.5	11.5	11.0	2.7	315	chr2L	13036221	intron	CG9932 -	chr2L	13036378	intron	CG9932 -	chr2L	13036536	intron	CG9932 -	chr2L_32_13035001	chr2L_13035001	RAL-821_100b
516	chr2L	13241935	13241947	chr2L	13244344	13244356	BS	7	2409	18.5	19.5	19.0	0.3	2421	chr2L	13241935	5` UTR	CR45330 +	chr2L	13243146	intron	CR45330 +	chr2L	13244356	5` UTR	CR45330 +	chr2L_7_13240001	chr2L_13240001	RAL-821_100b
519	chr2L	13405633	13405676	chr2L	13410444	13410498	Doc	33	4819	15.5	11.5	13.5	2.3	4865	chr2L	13405633	exon	CG7110 +	chr2L	13408066	intron	CG7110 +	chr2L	13410498	intron	CG7110 +	chr2L_33_13405001	chr2L_13405001	RAL-821_100b
522	chr2L	13449447	13449496	chr2L	13456908	13456957	Quasimodo	17	7460	8.5	18.0	13.2	1.2	7510	chr2L	13449447	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453202	intron	CG42784 +	chr2L	13456957	intron	CG42784 +	chr2L_17_13450001	chr2L_13450001	RAL-821_100b
524	chr2L	13481433	13481471	chr2L	13482064	13482089	jockey	26	631	14.0	19.0	16.5	1.5	656	chr2L	13481433	intron	CG42784 +	chr2L	13481761	intron	CG42784 +	chr2L	13482089	intron	CG42784 +	chr2L_26_13480001	chr2L_13480001	RAL-821_100b
526	chr2L	13522108	13522159	chr2L	13527651	13527702	Transpac	27	5540	2.0	8.0	5.0	4.5	5594	chr2L	13522108	intron	B4 -	chr2L	13524905	intron	B4 -	chr2L	13527702	intron	B4 -	chr2L_27_13520001	chr2L_13520001	RAL-821_100b
535	chr2L	13761784	13761822	chr2L	13762920	13762946	Doc	23	1131	12.5	11.0	11.8	1.8	1162	chr2L	13761784	intron	TM9SF4 +	chr2L	13762365	intron	TM9SF4 +	chr2L	13762946	intron	TM9SF4 +	chr2L_23_13760001	chr2L_13760001	RAL-821_100b
536	chr2L	13853064	13853115	chr2L	13862239	13862290	roo	32	9174	12.0	10.0	11.0	2.7	9226	chr2L	13853064	intron	CenG1A +	chr2L	13857677	intron	CenG1A +	chr2L	13862290	intron	CenG1A +	chr2L_32_13855001	chr2L_13855001	RAL-821_100b
554	chr2L	14642554	14642558	chr2L	14651737	14651739	roo	5	9185	22.5	9.5	16.0	0.3	9185	chr2L	14642554	intron	osp -	chr2L	14647146	intron	osp -	chr2L	14651739	intron	osp -	chr2L_5_14645001	chr2L_14645001	RAL-821_100b
555	chr2L	14642562	14642601	chr2L	14651735	14651788	roo	23	9185	9.0	8.5	8.8	2.3	9226	chr2L	14642562	intron	osp -	chr2L	14647175	intron	osp -	chr2L	14651788	intron	osp -	chr2L_23_14645001	chr2L_14645001	RAL-821_100b
559	chr2L	14803861	14803908	chr2L	14809081	14809136	copia	36	5227	13.0	9.5	11.2	3.0	5275	chr2L	14803861	intergenic	not near genes	chr2L	14806498	intergenic	not near genes	chr2L	14809136	intergenic	not near genes	chr2L_36_14805001	chr2L_14805001	RAL-821_100b
562	chr2L	14889929	14889981	chr2L	14890379	14890431	jockey	30	448	9.5	10.5	10.0	2.7	502	chr2L	14889929	intergenic	not near genes	chr2L	14890180	intergenic	not near genes	chr2L	14890431	intergenic	not near genes	chr2L_30_14890001	chr2L_14890001	RAL-821_100b
564	chr2L	14984359	14984405	chr2L	14991986	14992032	opus	24	7626	9.0	12.0	10.5	2.1	7673	chr2L	14984359	intron	mol -	chr2L	14988196	intron	mol -	chr2L	14992032	intron	mol -	chr2L_24_14985001	chr2L_14985001	RAL-821_100b
587	chr2L	15446024	15446084	chr2L	15453518	15453536	blood	33	7488	9.5	4.0	6.8	4.2	7512	chr2L	15446024	intergenic	not near genes	chr2L	15449780	intergenic	not near genes	chr2L	15453536	intergenic	not near genes	chr2L_33_15445001	chr2L_15445001	RAL-821_100b
595	chr2L	15586385	15586440	chr2L	15593462	15593517	297	34	7076	7.0	13.5	10.2	3.0	7132	chr2L	15586385	intergenic	not near genes	chr2L	15589951	intergenic	not near genes	chr2L	15593517	intergenic	not near genes	chr2L_34_15585001	chr2L_15585001	RAL-821_100b
601	chr2L	15826869	15826892	chr2L	15829288	15829311	Tabor	16	2419	6.5	12.5	9.5	1.5	2442	chr2L	15826869	intergenic	not near genes	chr2L	15828090	intergenic	not near genes	chr2L	15829311	intergenic	not near genes	chr2L_16_15825001	chr2L_15825001	RAL-821_100b
605	chr2L	15956001	15956015	chr2L	15957493	15957507	hobo	11	1490	23.0	12.5	17.8	0.6	1506	chr2L	15956001	intron	beat-Ib -	chr2L	15956754	intron	beat-Ib -	chr2L	15957507	intron	beat-Ib -	chr2L_11_15955001	chr2L_15955001	RAL-821_100b
606	chr2L	15956016	15956057	chr2L	15957490	15957530	hobo	27	1483	12.5	12.5	12.5	2.0	1514	chr2L	15956016	intron	beat-Ib -	chr2L	15956773	intron	beat-Ib -	chr2L	15957530	intron	beat-Ib -	chr2L_27_15955001	chr2L_15955001	RAL-821_100b
615	chr2L	16071771	16071771	chr2L	16217659	16217660	copia	70	145889	51.0	47.5	49.2	1.4	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_70_16140001	chr2L_16140001	RAL-821_100b
617	chr2L	16141143	16141193	chr2L	16146375	16146425	copia	19	5231	10.5	7.0	8.8	1.9	5282	chr2L	16141143	intergenic	not near genes	chr2L	16143784	intergenic	not near genes	chr2L	16146425	intergenic	not near genes	chr2L_19_16140001	chr2L_16140001	RAL-821_100b
618	chr2L	16153721	16153762	chr2L	16160814	16160855	297	29	7091	9.5	11.0	10.2	2.6	7134	chr2L	16153721	intergenic	not near genes	chr2L	16157288	intergenic	not near genes	chr2L	16160855	intergenic	not near genes	chr2L_29_16155001	chr2L_16155001	RAL-821_100b
620	chr2L	16071771	16071772	chr2L	16217660	16217660	copia	66	145889	51.0	47.5	49.2	1.3	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_66_16140001	chr2L_16140001	RAL-821_100b
622	chr2L	16280240	16280285	chr2L	16281426	16281481	1360	38	1192	11.0	11.5	11.2	3.1	1241	chr2L	16280240	intron	crp -	chr2L	16280860	intron	crp -	chr2L	16281481	intron	crp -	chr2L_38_16280001	chr2L_16280001	RAL-821_100b
632	chr2L	16511936	16511976	chr2L	16519168	16519208	HMS-Beagle	15	7231	10.5	13.5	12.0	1.2	7272	chr2L	16511936	intron	CG5953 -	chr2L	16515572	intron	CG5953 -	chr2L	16519208	intron	CG5953 -	chr2L_15_16515001	chr2L_16515001	RAL-821_100b
643	chr2L	16852794	16852806	chr2L	16859950	16859973	Doc4-element	10	7166	17.5	14.0	15.8	0.6	7179	chr2L	16852794	intergenic	CG31810 -	chr2L	16856384	intron	CG31809 -	chr2L	16859973	intergenic	CG6012 -	chr2L_10_16855001	chr2L_16855001	RAL-821_100b
645	chr2L	16958084	16958135	chr2L	16962897	16962948	Doc	28	4813	4.5	10.5	7.5	3.3	4864	chr2L	16958084	intergenic	not near genes	chr2L	16960516	intergenic	not near genes	chr2L	16962948	intergenic	not near genes	chr2L_28_16960001	chr2L_16960001	RAL-821_100b
657	chr2L	17167540	17167596	chr2L	17167806	17167862	pogo	23	263	12.5	7.0	9.8	2.1	322	chr2L	17167540	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167701	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167862	intron,intron	CG34106 +,beat-IIIa +	chr2L_23_17165001	chr2L_17165001	RAL-821_100b
659	chr2L	17199138	17199190	chr2L	17200630	17200653	hobo	28	1491	6.0	6.0	6.0	4.0	1515	chr2L	17199138	intron	beat-IIIc -	chr2L	17199896	intron	beat-IIIc -	chr2L	17200653	intron	beat-IIIc -	chr2L_28_17195001	chr2L_17195001	RAL-821_100b
664	chr2L	17273171	17273177	chr2L	17277979	17277985	F-element	5	4807	25.5	7.0	16.2	0.3	4814	chr2L	17273171	intergenic	not near genes	chr2L	17275578	intergenic	not near genes	chr2L	17277985	intergenic	not near genes	chr2L_5_17275001	chr2L_17275001	RAL-821_100b
665	chr2L	17273183	17273230	chr2L	17277974	17277993	F-element	26	4802	12.0	6.0	9.0	2.6	4810	chr2L	17273183	intergenic	not near genes	chr2L	17275588	intergenic	not near genes	chr2L	17277993	intergenic	not near genes	chr2L_26_17275001	chr2L_17275001	RAL-821_100b
671	chr2L	17335526	17335573	chr2L	17336717	17336762	1360	32	1189	11.0	13.0	12.0	2.5	1236	chr2L	17335526	intergenic	not near genes	chr2L	17336144	intergenic	not near genes	chr2L	17336762	intergenic	not near genes	chr2L_32_17335001	chr2L_17335001	RAL-821_100b
676	chr2L	17432015	17432044	chr2L	17432147	17432176	1360	17	132	0.0	11.0	5.5	2.6	161	chr2L	17432015	intron	Dif -	chr2L	17432096	intron	Dif -	chr2L	17432176	intron	Dif -	chr2L_17_17430001	chr2L_17430001	RAL-821_100b
683	chr2L	17687495	17687520	chr2L	17692265	17692290	F-element	16	4770	6.0	10.5	8.2	1.7	4795	chr2L	17687495	intron	CadN -	chr2L	17689892	intron	CadN -	chr2L	17692290	intron	CadN -	chr2L_16_17685001	chr2L_17685001	RAL-821_100b
685	chr2L	17727846	17727864	chr2L	17729338	17729349	hobo	9	1489	16.5	20.5	18.5	0.5	1503	chr2L	17727846	intron	CadN -	chr2L	17728598	intron	CadN -	chr2L	17729349	intron	CadN -	chr2L_9_17725001	chr2L_17725001	RAL-821_100b
686	chr2L	17727865	17727876	chr2L	17729337	17729352	hobo	11	1486	11.0	20.0	15.5	0.7	1487	chr2L	17727865	intron	CadN -	chr2L	17728608	intron	CadN -	chr2L	17729352	intron	CadN -	chr2L_11_17725001	chr2L_17725001	RAL-821_100b
688	chr2L	17819896	17819953	chr2L	17825124	17825171	copia	38	5226	7.5	13.0	10.2	3.4	5275	chr2L	17819896	intron	CadN2 -	chr2L	17822534	intron	CadN2 -	chr2L	17825171	intron	CadN2 -	chr2L_38_17820001	chr2L_17820001	RAL-821_100b
693	chr2L	17911937	17911982	chr2L	17914140	17914167	pogo	26	2199	14.5	14.5	14.5	1.7	2230	chr2L	17911937	intergenic	not near genes	chr2L	17913052	intergenic	not near genes	chr2L	17914167	intergenic	CG43271 -	chr2L_26_17910001	chr2L_17910001	RAL-821_100b
698	chr2L	17951921	17951972	chr2L	17953413	17953464	hobo	39	1491	9.5	10.0	9.8	3.6	1543	chr2L	17951921	intergenic	CR44398 -,CR44397 -	chr2L	17952692	intergenic	not near genes	chr2L	17953464	intergenic	not near genes	chr2L_39_17950001	chr2L_17950001	RAL-821_100b
701	chr2L	18051852	18051901	chr2L	18061024	18061073	roo	33	9168	20.0	9.5	14.8	2.1	9221	chr2L	18051852	intron	rdo +	chr2L	18056462	intron	rdo +	chr2L	18061073	intron	rdo +	chr2L_33_18055001	chr2L_18055001	RAL-821_100b
723	chr2L	18408005	18408059	chr2L	18412814	18412876	Doc	18	4808	7.0	0.5	3.8	3.8	4871	chr2L	18408005	intergenic	not near genes	chr2L	18410440	intergenic	not near genes	chr2L	18412876	intergenic	not near genes	chr2L_18_18410001	chr2L_18410001	RAL-821_100b
739	chr2L	19147343	19147400	chr2L	19154403	19154460	297	38	7058	8.5	13.5	11.0	3.2	7117	chr2L	19147343	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154460	intron	brat +	chr2L_38_19150001	chr2L_19150001	RAL-821_100b
748	chr2L	19344999	19345041	chr2L	19357226	19357275	blood	40	12230	14.0	18.0	16.0	2.4	12276	chr2L	19344999	intron	dnt -	chr2L	19351137	intron	dnt -	chr2L	19357275	intron	dnt -	chr2L_40_19350001	chr2L_19350001	RAL-821_100b
755	chr2L	19620072	19620128	chr2L	19621086	19621132	jockey	38	1011	13.0	11.0	12.0	2.9	1060	chr2L	19620072	intron	Lar +	chr2L	19620602	intron	Lar +	chr2L	19621132	intron	Lar +	chr2L_38_19620001	chr2L_19620001	RAL-821_100b
756	chr2L	19652562	19652603	chr2L	19674010	19674043	opus	25	21453	8.5	10.5	9.5	2.4	21481	chr2L	19652562	intron	Lar +	chr2L	19663302	intron	Lar +	chr2L	19674043	intron	Lar +	chr2L_25_19660001	chr2L_19660001	RAL-821_100b
759	chr2L	19703516	19703567	chr2L	19712677	19712722	roo	42	9158	16.5	11.0	13.8	2.8	9206	chr2L	19703516	intron	Lar +	chr2L	19708119	intron	Lar +	chr2L	19712722	intron	Lar +	chr2L_42_19705001	chr2L_19705001	RAL-821_100b
762	chr2L	19762789	19762839	chr2L	19763055	19763096	pogo	29	264	7.0	9.5	8.2	3.2	307	chr2L	19762789	exon	fbp -	chr2L	19762942	intron	fbp -	chr2L	19763096	intron	fbp -	chr2L_29_19760001	chr2L_19760001	RAL-821_100b
778	chr2L	20005848	20005870	chr2L	20010949	20010971	flea	21	5100	20.0	13.5	16.8	1.2	5123	chr2L	20005848	intron	CG43861 -	chr2L	20008410	intron	CG43861 -	chr2L	20010971	intron	CG43861 -	chr2L_21_20005001	chr2L_20005001	RAL-821_100b
779	chr2L	20005871	20005903	chr2L	20010946	20011004	flea	33	5097	8.5	12.5	10.5	2.9	5133	chr2L	20005871	intron	CG43861 -	chr2L	20008438	intron	CG43861 -	chr2L	20011004	intron	CG43861 -	chr2L_33_20005001	chr2L_20005001	RAL-821_100b
784	chr2L	20272090	20272098	chr2L	20282826	20282834	copia	9	10736	22.5	13.5	18.0	0.5	10744	chr2L	20272090	intergenic	not near genes	chr2L	20277462	intergenic	not near genes	chr2L	20282834	intergenic	not near genes	chr2L_9_20275001	chr2L_20275001	RAL-821_100b
785	chr2L	20272099	20272143	chr2L	20282825	20282879	copia	35	10734	7.0	13.5	10.2	3.1	10780	chr2L	20272099	intergenic	not near genes	chr2L	20277489	intergenic	not near genes	chr2L	20282879	intergenic	not near genes	chr2L_35_20275001	chr2L_20275001	RAL-821_100b
789	chr2L	20303159	20303188	chr2L	20310652	20310672	blood	11	7492	0.5	21.5	11.0	0.9	7513	chr2L	20303159	intergenic	not near genes	chr2L	20306916	intergenic	not near genes	chr2L	20310672	intergenic	not near genes	chr2L_11_20305001	chr2L_20305001	RAL-821_100b
792	chr2L	20372204	20372246	chr2L	20372470	20372509	pogo	34	265	3.0	15.0	9.0	3.4	305	chr2L	20372204	intergenic	Ugt37a1 -	chr2L	20372356	intergenic	Ugt37a1 -	chr2L	20372509	exon	Ugt37a1 -	chr2L_34_20370001	chr2L_20370001	RAL-821_100b
794	chr2L	20468352	20468396	chr2L	20468482	20468526	INE-1	26	125	8.0	10.5	9.2	2.5	174	chr2L	20468352	intron	CR44980 -	chr2L	20468439	intron	CR44980 -	chr2L	20468526	intron	CR44980 -	chr2L_26_20465001	chr2L_20465001	RAL-821_100b
800	chr2L	20568637	20568687	chr2L	20569052	20569097	X-element	43	414	10.5	9.0	9.8	4.0	460	chr2L	20568637	intron	CR45347 +	chr2L	20568867	intron	CR45347 +	chr2L	20569097	intron	CR45347 +	chr2L_43_20565001	chr2L_20565001	RAL-821_100b
801	chr2L	20576196	20576249	chr2L	20583688	20583742	blood	35	7490	11.5	10.5	11.0	2.9	7546	chr2L	20576196	intergenic	CR45347 +	chr2L	20579969	intergenic	not near genes	chr2L	20583742	3` UTR	CR44909 -	chr2L_35_20575001	chr2L_20575001	RAL-821_100b
809	chr2L	20835785	20835839	chr2L	20836525	20836581	Quasimodo	34	741	13.0	9.0	11.0	2.8	796	chr2L	20835785	5` UTR	Oseg5 -	chr2L	20836183	intergenic	Oseg5 -,Spn38F -	chr2L	20836581	intergenic	Spn38F -	chr2L_34_20835001	chr2L_20835001	RAL-821_100b
810	chr2L	20891509	20891543	chr2L	20896635	20896669	jockey	16	5123	7.5	9.0	8.2	1.7	5160	chr2L	20891509	intron,intron	CG43739 -,sky -	chr2L	20894089	intron,intron	CG43739 -,sky -	chr2L	20896669	intron,intron	CG43739 -,sky -	chr2L_16_20890001	chr2L_20890001	RAL-821_100b
811	chr2L	20901430	20901488	chr2L	20902619	20902659	1360	15	1187	13.5	20.5	17.0	0.8	1229	chr2L	20901430	intron,intron	CG43739 -,sky -	chr2L	20902044	intron,intron	CG43739 -,sky -	chr2L	20902659	intron,intron	CG43739 -,sky -	chr2L_15_20900001	chr2L_20900001	RAL-821_100b
821	chr2L	20976628	20976669	chr2L	20981468	20981509	X-element	22	4839	9.0	12.5	10.8	1.9	4881	chr2L	20976628	intron	CG42238 -	chr2L	20979068	intron	CG42238 -	chr2L	20981509	intron	CG42238 -	chr2L_22_20975001	chr2L_20975001	RAL-821_100b
825	chr2L	21020251	21020260	chr2L	21023953	21023962	NOF	6	3702	24.0	13.0	18.5	0.3	3711	chr2L	21020251	intron	CG42238 -	chr2L	21022106	intron	CG42238 -	chr2L	21023962	intron	CG42238 -	chr2L_6_21020001	chr2L_21020001	RAL-821_100b
826	chr2L	21020261	21020307	chr2L	21023952	21024009	NOF	28	3701	11.5	11.5	11.5	2.2	3748	chr2L	21020261	intron	CG42238 -	chr2L	21022135	intron	CG42238 -	chr2L	21024009	intron	CG42238 -	chr2L_28_21020001	chr2L_21020001	RAL-821_100b
828	chr2L	21041116	21041166	chr2L	21049402	21049436	Tirant	29	8284	7.5	13.0	10.2	2.6	8320	chr2L	21041116	intron	CG42238 -	chr2L	21045276	intron	CG42238 -	chr2L	21049436	intron	CG42238 -	chr2L_29_21045001	chr2L_21045001	RAL-821_100b
841	chr2L	21347526	21347578	chr2L	21355023	21355057	blood	31	7496	16.0	6.0	11.0	2.6	7531	chr2L	21347526	intron	Tsp39D +	chr2L	21351292	intron	Tsp39D +	chr2L	21355057	intron	Tsp39D +	chr2L_31_21350001	chr2L_21350001	RAL-821_100b
845	chr2L	21597024	21597056	chr2L	21604793	21604825	roo	16	7769	10.5	12.0	11.2	1.3	7801	chr2L	21597024	intergenic	not near genes	chr2L	21600924	intergenic	not near genes	chr2L	21604825	intergenic	not near genes	chr2L_16_21600001	chr2L_21600001	RAL-821_100b
847	chr2L	21653168	21653220	chr2L	21656497	21656549	invader4	15	3327	23.0	18.5	20.8	0.7	3381	chr2L	21653168	intergenic	not near genes	chr2L	21654858	intergenic	not near genes	chr2L	21656549	intergenic	not near genes	chr2L_15_21650001	chr2L_21650001	RAL-821_100b
848	chr2L	21691802	21691853	chr2L	21698297	21698328	Burdock	22	6493	10.0	0.0	5.0	3.7	6526	chr2L	21691802	intron	CG31619 +	chr2L	21695065	intron	CG31619 +	chr2L	21698328	intron	CG31619 +	chr2L_22_21695001	chr2L_21695001	RAL-821_100b
861	chr2L	21981661	21981702	chr2L	21990850	21990881	roo	26	9188	14.5	11.0	12.8	1.9	9220	chr2L	21981661	exon	CG2528 -	chr2L	21986271	intron	CG2528 -	chr2L	21990881	exon	CG2528 -	chr2L_26_21985001	chr2L_21985001	RAL-821_100b
862	chr2L	21981704	21981716	chr2L	21990844	21990866	roo	8	9173	8.5	9.5	9.0	0.8	9162	chr2L	21981704	exon	CG2528 -	chr2L	21986285	intron	CG2528 -	chr2L	21990866	exon	CG2528 -	chr2L_8_21985001	chr2L_21985001	RAL-821_100b
874	chr2L	22258594	22258639	chr2L	22260743	22260783	G6	27	2148	21.5	12.5	17.0	1.5	2189	chr2L	22258594	intergenic	Tif-IA +	chr2L	22259688	intergenic	not near genes	chr2L	22260783	intergenic	not near genes	chr2L_27_22255001	chr2L_22255001	RAL-821_100b
875	chr2L	22258640	22258644	chr2L	22260742	22260793	G6	6	2141	16.5	12.5	14.5	0.4	2153	chr2L	22258640	intergenic	Tif-IA +	chr2L	22259716	intergenic	not near genes	chr2L	22260793	intergenic	not near genes	chr2L_6_22255001	chr2L_22255001	RAL-821_100b
878	chr2L	22446006	22446028	chr2L	22506904	22506926	HMS-Beagle	7	60895	64.0	76.5	70.2	0.1	60920	chr2L	22446006	intergenic	not near genes	chr2L	22476466	intergenic	not near genes	chr2L	22506926	intergenic	not near genes	chr2L_7_22475001	chr2L_22475001	RAL-821_100b
879	chr2L	22548921	22548933	chr2L	22550171	22550183	1360	7	1250	13.5	38.5	26.0	0.3	1262	chr2L	22548921	intergenic	CG17490 +	chr2L	22549552	intergenic	not near genes	chr2L	22550183	intergenic	CG17493 +	chr2L_7_22545001	chr2L_22545001	RAL-821_100b
880	chr2L	22581946	22582002	chr2L	22583760	22583816	S-element	30	1813	8.5	10.5	9.5	2.9	1870	chr2L	22581946	intron	CG17494 +	chr2L	22582881	intron	CG17494 +	chr2L	22583816	intron	CG17494 +	chr2L_30_22580001	chr2L_22580001	RAL-821_100b
883	chr2L	22679800	22679820	chr2L	22684597	22684612	F-element	6	4796	40.5	26.0	33.2	0.2	4812	chr2L	22679800	intron	CG40006 -	chr2L	22682206	intron	CG40006 -	chr2L	22684612	intron	CG40006 -	chr2L_6_22680001	chr2L_22680001	RAL-821_100b
887	chr2L	22776404	22776452	chr2L	22778218	22778266	S-element	14	1814	12.5	20.0	16.2	0.8	1862	chr2L	22776404	intergenic	not near genes	chr2L	22777335	intergenic	not near genes	chr2L	22778266	intergenic	not near genes	chr2L_14_22775001	chr2L_22775001	RAL-821_100b
889	chr2R	469942	469949	chr2R	473207	473210	F-element	4	3264	14.0	11.5	12.8	0.3	3268	chr2R	469942	intergenic	not near genes	chr2R	471576	intergenic	not near genes	chr2R	473210	intergenic	not near genes	chr2R_4_470001	chr2R_470001	RAL-821_100b
890	chr2R	469956	469976	chr2R	473202	473236	F-element	19	3254	9.5	11.0	10.2	1.7	3280	chr2R	469956	intergenic	not near genes	chr2R	471596	intergenic	not near genes	chr2R	473236	intergenic	not near genes	chr2R_19_470001	chr2R_470001	RAL-821_100b
891	chr2R	469977	469979	chr2R	473193	473245	F-element	4	3250	9.0	10.0	9.5	0.4	3268	chr2R	469977	intergenic	not near genes	chr2R	471611	intergenic	not near genes	chr2R	473245	intergenic	not near genes	chr2R_4_470001	chr2R_470001	RAL-821_100b
892	chr2R	529316	529351	chr2R	537946	538001	Max-element	17	8646	8.5	8.0	8.2	1.8	8685	chr2R	529316	intron	CG40378 +	chr2R	533658	intron	CG40378 +	chr2R	538001	intron	CG40378 +	chr2R_17_530001	chr2R_530001	RAL-821_100b
893	chr2R	552738	552789	chr2R	553971	553977	1360	8	1215	21.0	16.5	18.8	0.4	1239	chr2R	552738	intron	CG40378 +	chr2R	553358	intron	CG40378 +	chr2R	553977	intron	CG40378 +	chr2R_8_550001	chr2R_550001	RAL-821_100b
894	chr2R	1082366	1082383	chr2R	1087127	1087173	Doc	21	4781	13.0	11.0	12.0	1.6	4807	chr2R	1082366	intron	rl +	chr2R	1084770	intron	rl +	chr2R	1087173	intron	rl +	chr2R_21_1080001	chr2R_1080001	RAL-821_100b
897	chr2R	1516581	1516603	chr2R	1521334	1521356	1731	26	4753	81.0	55.5	68.2	0.4	4775	chr2R	1516581	exon	Maf1 -	chr2R	1518968	intron	Maf1 -	chr2R	1521356	5` UTR	Maf1 -	chr2R_26_1515001	chr2R_1515001	RAL-821_100b
900	chr2R	2110482	2110500	chr2R	2118065	2118083	17.6	17	7583	24.0	15.0	19.5	0.8	7601	chr2R	2110482	intron	CG17684 -	chr2R	2114282	intron	CG17684 -	chr2R	2118083	intron	CG17684 -	chr2R_17_2110001	chr2R_2110001	RAL-821_100b
901	chr2R	2498961	2499012	chr2R	2508133	2508184	roo	36	9171	8.0	8.5	8.2	3.9	9223	chr2R	2498961	intron	MFS17 -	chr2R	2503572	intron	MFS17 -	chr2R	2508184	intron	MFS17 -	chr2R_36_2500001	chr2R_2500001	RAL-821_100b
903	chr2R	1373050	1373060	chr2R	2589323	2589333	Cr1a	4	1216273	30.5	38.5	34.5	0.1	1216283	chr2R	1373050	intron	l(2)41Ab +	chr2R	1981192	intron	CG17684 -	chr2R	2589333	intergenic	not near genes	chr2R_4_1980001	chr2R_1980001	RAL-821_100b
904	chr2R	2875359	2875392	chr2R	2878899	2878931	HMS-Beagle	7	3540	43.5	43.5	43.5	0.2	3572	chr2R	2875359	intergenic	not near genes	chr2R	2877145	intergenic	not near genes	chr2R	2878931	intergenic	not near genes	chr2R_7_2875001	chr2R_2875001	RAL-821_100b
908	chr2R	3144060	3144105	chr2R	3393363	3393408	Doc	20	249302	48.5	25.5	37.0	0.5	249348	chr2R	3144060	intron	CG42596 +	chr2R	3268734	intergenic	not near genes	chr2R	3393408	intergenic	not near genes	chr2R_20_3265001	chr2R_3265001	RAL-821_100b
911	chr2R	3526626	3526631	chr2R	3531381	3531386	F-element	4	4755	9.0	8.0	8.5	0.4	4760	chr2R	3526626	intergenic	not near genes	chr2R	3529006	intergenic	not near genes	chr2R	3531386	intergenic	not near genes	chr2R_4_3525001	chr2R_3525001	RAL-821_100b
912	chr2R	3532608	3532641	chr2R	3536053	3536109	Doc	7	3465	7.5	5.5	6.5	0.9	3501	chr2R	3532608	intergenic	not near genes	chr2R	3534358	intergenic	not near genes	chr2R	3536109	intergenic	not near genes	chr2R_7_3530001	chr2R_3530001	RAL-821_100b
925	chr2R	4622951	4622982	chr2R	4624109	4624166	1360	10	1173	31.5	29.5	30.5	0.3	1215	chr2R	4622951	intergenic	CR44101 -	chr2R	4623558	intergenic	not near genes	chr2R	4624166	intergenic	not near genes	chr2R_10_4620001	chr2R_4620001	RAL-821_100b
926	chr2R	4624623	4624672	chr2R	4626553	4626567	Bica	12	1927	46.0	39.0	42.5	0.3	1944	chr2R	4624623	intergenic	not near genes	chr2R	4625595	intergenic	not near genes	chr2R	4626567	intergenic	not near genes	chr2R_12_4625001	chr2R_4625001	RAL-821_100b
930	chr2R	4690754	4690766	chr2R	4690933	4690939	diver2	4	178	37.0	24.5	30.8	0.1	185	chr2R	4690754	intergenic	not near genes	chr2R	4690846	intergenic	not near genes	chr2R	4690939	intergenic	not near genes	chr2R_4_4690001	chr2R_4690001	RAL-821_100b
934	chr2R	4838861	4838898	chr2R	4840394	4840435	transib2	9	1541	29.0	26.0	27.5	0.3	1574	chr2R	4838861	intergenic	not near genes	chr2R	4839648	intergenic	not near genes	chr2R	4840435	intergenic	not near genes	chr2R_9_4835001	chr2R_4835001	RAL-821_100b
935	chr2R	4870718	4870734	chr2R	4871254	4871270	R1A1-element	6	536	41.0	43.5	42.2	0.1	552	chr2R	4870718	intergenic	not near genes	chr2R	4870994	intergenic	not near genes	chr2R	4871270	intergenic	not near genes	chr2R_6_4870001	chr2R_4870001	RAL-821_100b
947	chr2R	5417973	5418024	chr2R	5420630	5420681	Burdock	24	2656	9.5	10.0	9.8	2.2	2708	chr2R	5417973	intron	laccase2 +	chr2R	5419327	intron	laccase2 +	chr2R	5420681	intron	laccase2 +	chr2R_24_5415001	chr2R_5415001	RAL-821_100b
948	chr2R	5450084	5450110	chr2R	5451012	5451027	baggins	9	921	29.0	40.5	34.8	0.3	943	chr2R	5450084	intron	laccase2 +	chr2R	5450556	intron	laccase2 +	chr2R	5451027	intron	laccase2 +	chr2R_9_5450001	chr2R_5450001	RAL-821_100b
957	chr2R	5543205	5543223	chr2R	5547314	5547332	invader1	9	4107	27.0	35.0	31.0	0.3	4127	chr2R	5543205	intron	CG30438 +	chr2R	5545268	intron	CG30438 +	chr2R	5547332	intron	CG30438 +	chr2R_9_5545001	chr2R_5545001	RAL-821_100b
976	chr2R	5869250	5869302	chr2R	5874351	5874403	flea	42	5100	13.0	8.0	10.5	3.7	5153	chr2R	5869250	intergenic	not near genes	chr2R	5871826	intergenic	not near genes	chr2R	5874403	intergenic	not near genes	chr2R_42_5870001	chr2R_5870001	RAL-821_100b
979	chr2R	5902137	5902188	chr2R	5909721	5909772	17.6	24	7581	11.5	7.5	9.5	2.3	7635	chr2R	5902137	intron	CG43366 +	chr2R	5905954	intron	CG43366 +	chr2R	5909772	intron	CG43366 +	chr2R_24_5905001	chr2R_5905001	RAL-821_100b
983	chr2R	6096695	6096751	chr2R	6101918	6101941	BS	36	5216	9.5	21.0	15.2	2.2	5246	chr2R	6096695	intron	EcR -	chr2R	6099318	intron	EcR -	chr2R	6101941	intron	EcR -	chr2R_36_6095001	chr2R_6095001	RAL-821_100b
989	chr2R	6494511	6494535	chr2R	6499298	6499322	F-element	8	4787	25.5	9.5	17.5	0.4	4811	chr2R	6494511	intergenic	not near genes	chr2R	6496916	intergenic	not near genes	chr2R	6499322	intergenic	not near genes	chr2R_8_6495001	chr2R_6495001	RAL-821_100b
990	chr2R	6494540	6494549	chr2R	6499318	6499336	F-element	7	4784	17.5	13.0	15.2	0.4	4796	chr2R	6494540	intergenic	not near genes	chr2R	6496938	intergenic	not near genes	chr2R	6499336	intergenic	not near genes	chr2R_7_6495001	chr2R_6495001	RAL-821_100b
995	chr2R	6579755	6579801	chr2R	6584866	6584907	flea	31	5110	14.5	16.5	15.5	1.9	5152	chr2R	6579755	intron	jing +	chr2R	6582331	intron	jing +	chr2R	6584907	intron	jing +	chr2R_31_6580001	chr2R_6580001	RAL-821_100b
998	chr2R	6622124	6622169	chr2R	6622621	6622666	invader1	17	496	28.0	40.0	34.0	0.5	542	chr2R	6622124	intergenic	not near genes	chr2R	6622395	intergenic	not near genes	chr2R	6622666	intergenic	not near genes	chr2R_17_6620001	chr2R_6620001	RAL-821_100b
1011	chr2R	6952135	6952181	chr2R	6959744	6959786	opus	13	7607	11.0	8.5	9.8	1.2	7651	chr2R	6952135	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955960	intron,intron	mim -,CheB42c -	chr2R	6959786	intron,intron	mim -,CheB42c -	chr2R_13_6955001	chr2R_6955001	RAL-821_100b
1015	chr2R	7139952	7139956	chr2R	7141423	7141430	hopper2	5	1489	3.0	14.5	8.8	0.5	1478	chr2R	7139952	intergenic	not near genes	chr2R	7140691	intergenic	not near genes	chr2R	7141430	intergenic	not near genes	chr2R_5_7140001	chr2R_7140001	RAL-821_100b
1018	chr2R	7196548	7196596	chr2R	7201348	7201396	F-element	32	4799	6.0	12.0	9.0	3.2	4848	chr2R	7196548	intron	pk +	chr2R	7198972	intron	pk +	chr2R	7201396	intron	pk +	chr2R_32_7195001	chr2R_7195001	RAL-821_100b
1019	chr2R	7209850	7209858	chr2R	7217623	7217631	roo	7	7773	8.0	10.5	9.2	0.7	7781	chr2R	7209850	intron	pk +	chr2R	7213740	intron	pk +	chr2R	7217631	intron	pk +	chr2R_7_7210001	chr2R_7210001	RAL-821_100b
1020	chr2R	7209861	7209874	chr2R	7217593	7217660	roo	10	7773	4.5	3.5	4.0	2.0	7799	chr2R	7209861	intron	pk +	chr2R	7213760	intron	pk +	chr2R	7217660	intron	pk +	chr2R_10_7210001	chr2R_7210001	RAL-821_100b
1021	chr2R	7235804	7235848	chr2R	7240904	7240955	jockey	18	5113	10.5	4.5	7.5	2.1	5151	chr2R	7235804	intergenic	not near genes	chr2R	7238380	intergenic	not near genes	chr2R	7240955	intergenic	not near genes	chr2R_18_7235001	chr2R_7235001	RAL-821_100b
1023	chr2R	7262178	7262195	chr2R	7269264	7269276	297	7	7083	12.5	18.5	15.5	0.4	7098	chr2R	7262178	intergenic	not near genes	chr2R	7265727	intergenic	not near genes	chr2R	7269276	intergenic	not near genes	chr2R_7_7265001	chr2R_7265001	RAL-821_100b
1024	chr2R	7262199	7262212	chr2R	7269263	7269289	297	10	7079	8.0	18.0	13.0	0.7	7090	chr2R	7262199	intergenic	not near genes	chr2R	7265744	intergenic	not near genes	chr2R	7269289	intergenic	not near genes	chr2R_10_7265001	chr2R_7265001	RAL-821_100b
1034	chr2R	7434873	7434910	chr2R	7439199	7439230	Juan	20	4325	16.0	23.0	19.5	1.0	4357	chr2R	7434873	intergenic	so +	chr2R	7437052	intergenic	not near genes	chr2R	7439230	intergenic	not near genes	chr2R_20_7435001	chr2R_7435001	RAL-821_100b
1037	chr2R	7608385	7608442	chr2R	7613613	7613669	I-element	14	5226	4.0	0.0	2.0	4.7	5284	chr2R	7608385	intron	CG1358 -	chr2R	7611027	intron	CG1358 -	chr2R	7613669	intron	CG1358 -	chr2R_14_7610001	chr2R_7610001	RAL-821_100b
1043	chr2R	7815648	7815699	chr2R	7822142	7822193	Burdock	31	6493	12.5	11.5	12.0	2.4	6545	chr2R	7815648	intergenic	CG1882 +	chr2R	7818920	intergenic	not near genes	chr2R	7822193	3` UTR	cathD -	chr2R_31_7815001	chr2R_7815001	RAL-821_100b
1044	chr2R	7862218	7862251	chr2R	7867346	7867362	flea	9	5124	35.0	14.0	24.5	0.4	5144	chr2R	7862218	intron	Dgk -	chr2R	7864790	intron	Dgk -	chr2R	7867362	intron	Dgk -	chr2R_9_7860001	chr2R_7860001	RAL-821_100b
1045	chr2R	7869168	7869211	chr2R	7873979	7874017	Doc	29	4809	16.5	17.5	17.0	1.6	4849	chr2R	7869168	intron	Dgk -	chr2R	7871592	intron	Dgk -	chr2R	7874017	intron	Dgk -	chr2R_29_7870001	chr2R_7870001	RAL-821_100b
1070	chr2R	8330840	8330851	chr2R	8331351	8331359	roo	7	509	24.0	10.5	17.2	0.4	519	chr2R	8330840	intron	pdm3 +	chr2R	8331100	intron	pdm3 +	chr2R	8331359	intron	pdm3 +	chr2R_7_8330001	chr2R_8330001	RAL-821_100b
1071	chr2R	8330852	8330874	chr2R	8331348	8331385	roo	22	505	17.0	9.0	13.0	1.6	533	chr2R	8330852	intron	pdm3 +	chr2R	8331118	intron	pdm3 +	chr2R	8331385	intron	pdm3 +	chr2R_22_8330001	chr2R_8330001	RAL-821_100b
1072	chr2R	8330876	8330891	chr2R	8331346	8331384	roo	9	504	9.5	8.5	9.0	0.9	508	chr2R	8330876	intron	pdm3 +	chr2R	8331130	intron	pdm3 +	chr2R	8331384	intron	pdm3 +	chr2R_9_8330001	chr2R_8330001	RAL-821_100b
1075	chr2R	8398192	8398214	chr2R	8402994	8403020	Doc	23	4804	20.5	17.0	18.8	1.2	4828	chr2R	8398192	intron	CG2121 -	chr2R	8400606	intron	CG2121 -	chr2R	8403020	intron	CG2121 -	chr2R_23_8400001	chr2R_8400001	RAL-821_100b
1076	chr2R	8398216	8398240	chr2R	8402987	8403028	Doc	16	4799	9.5	13.5	11.5	1.3	4812	chr2R	8398216	intron	CG2121 -	chr2R	8400622	intron	CG2121 -	chr2R	8403028	intron	CG2121 -	chr2R_16_8400001	chr2R_8400001	RAL-821_100b
1077	chr2R	8416293	8416316	chr2R	8417142	8417154	I-element	12	846	8.0	18.0	13.0	0.9	861	chr2R	8416293	intergenic	not near genes	chr2R	8416724	intergenic	CG43296 -	chr2R	8417154	intergenic	CG43296 -	chr2R_12_8415001	chr2R_8415001	RAL-821_100b
1085	chr2R	8566026	8566066	chr2R	8566986	8567037	1360	10	970	4.5	31.5	18.0	0.5	1011	chr2R	8566026	5` UTR	Cyp6a14 -	chr2R	8566532	5` UTR	Cyp6a14 -	chr2R	8567037	5` UTR	Cyp6a14 -	chr2R_10_8565001	chr2R_8565001	RAL-821_100b
1093	chr2R	8722738	8722794	chr2R	8723004	8723040	pogo	33	259	10.5	11.0	10.8	2.8	302	chr2R	8722738	intron	CG14767 -	chr2R	8722889	intron	CG14767 -	chr2R	8723040	intron	CG14767 -	chr2R_33_8720001	chr2R_8720001	RAL-821_100b
1097	chr2R	8777900	8777946	chr2R	8784129	8784175	diver	18	6227	8.5	13.5	11.0	1.5	6275	chr2R	8777900	intergenic	not near genes	chr2R	8781038	intergenic	not near genes	chr2R	8784175	intergenic	not near genes	chr2R_18_8780001	chr2R_8780001	RAL-821_100b
1108	chr2R	9151279	9151282	chr2R	9157774	9157777	Burdock	6	6494	39.5	13.0	26.2	0.2	6498	chr2R	9151279	exon	CG30345 +	chr2R	9154528	intergenic	not near genes	chr2R	9157777	intergenic	CG8008 -	chr2R_6_9150001	chr2R_9150001	RAL-821_100b
1109	chr2R	9151283	9151331	chr2R	9157773	9157826	Burdock	23	6490	15.5	13.0	14.2	1.5	6543	chr2R	9151283	exon	CG30345 +	chr2R	9154554	intergenic	not near genes	chr2R	9157826	intergenic	CG8008 -	chr2R_23_9150001	chr2R_9150001	RAL-821_100b
1112	chr2R	9212671	9212720	chr2R	9213182	9213231	roo	39	505	17.5	14.5	16.0	2.3	560	chr2R	9212671	intergenic	CR45309 +	chr2R	9212951	intergenic	CR45309 +	chr2R	9213231	5` UTR	CR45309 +	chr2R_39_9210001	chr2R_9210001	RAL-821_100b
1126	chr2R	9480057	9480076	chr2R	9490613	9490632	roo	12	10555	19.0	12.5	15.8	0.7	10575	chr2R	9480057	intergenic	not near genes	chr2R	9485344	intergenic	not near genes	chr2R	9490632	intergenic	not near genes	chr2R_12_9485001	chr2R_9485001	RAL-821_100b
1127	chr2R	9480087	9480100	chr2R	9490608	9490656	roo	11	10550	10.0	10.0	10.0	1.0	10569	chr2R	9480087	intergenic	not near genes	chr2R	9485372	intergenic	not near genes	chr2R	9490656	intergenic	not near genes	chr2R_11_9485001	chr2R_9485001	RAL-821_100b
1135	chr2R	9726587	9726637	chr2R	9734165	9734215	17.6	25	7576	16.0	9.0	12.5	1.9	7628	chr2R	9726587	intron	sqa -	chr2R	9730401	intron	sqa -	chr2R	9734215	intron	sqa -	chr2R_25_9730001	chr2R_9730001	RAL-821_100b
1141	chr2R	9871015	9871062	chr2R	9871526	9871573	roo	24	510	5.5	12.0	8.8	2.4	558	chr2R	9871015	intron	cbx -	chr2R	9871294	intron	cbx -	chr2R	9871573	intron,5` UTR	cbx -,CG18446 +	chr2R_24_9870001	chr2R_9870001	RAL-821_100b
1142	chr2R	9871064	9871074	chr2R	9871525	9871585	roo	11	501	4.0	12.0	8.0	1.2	521	chr2R	9871064	intron	cbx -	chr2R	9871324	intron	cbx -	chr2R	9871585	intron,5` UTR	cbx -,CG18446 +	chr2R_11_9870001	chr2R_9870001	RAL-821_100b
1145	chr2R	9945418	9945429	chr2R	9945639	9945650	BS	7	220	26.0	11.0	18.5	0.4	232	chr2R	9945418	intron	Mef2 -	chr2R	9945534	intron	Mef2 -	chr2R	9945650	intron	Mef2 -	chr2R_7_9945001	chr2R_9945001	RAL-821_100b
1146	chr2R	9945431	9945442	chr2R	9945635	9945662	BS	6	214	21.0	9.5	15.2	0.4	231	chr2R	9945431	intron	Mef2 -	chr2R	9945546	intron	Mef2 -	chr2R	9945662	intron	Mef2 -	chr2R_6_9945001	chr2R_9945001	RAL-821_100b
1147	chr2R	9945445	9945467	chr2R	9945630	9945688	BS	20	215	10.0	9.0	9.5	1.9	243	chr2R	9945445	intron	Mef2 -	chr2R	9945566	intron	Mef2 -	chr2R	9945688	intron	Mef2 -	chr2R_20_9945001	chr2R_9945001	RAL-821_100b
1152	chr2R	10005830	10005848	chr2R	10007015	10007016	1360	6	1182	45.5	33.5	39.5	0.1	1186	chr2R	10005830	intron	Pka-R2 -	chr2R	10006423	intron	Pka-R2 -	chr2R	10007016	intron	Pka-R2 -	chr2R_6_10005001	chr2R_10005001	RAL-821_100b
1153	chr2R	10005851	10005881	chr2R	10007011	10007041	1360	13	1175	35.0	32.5	33.8	0.4	1190	chr2R	10005851	intron	Pka-R2 -	chr2R	10006446	intron	Pka-R2 -	chr2R	10007041	intron	Pka-R2 -	chr2R_13_10005001	chr2R_10005001	RAL-821_100b
1164	chr2R	10176851	10176910	chr2R	10186046	10186102	roo	35	9193	8.5	10.0	9.2	3.4	9251	chr2R	10176851	intron	KCNQ -	chr2R	10181476	intron	KCNQ -	chr2R	10186102	intron	KCNQ -	chr2R_35_10180001	chr2R_10180001	RAL-821_100b
1199	chr2R	10585573	10585576	chr2R	10594181	10594184	Tirant	4	8608	13.5	17.0	15.2	0.2	8611	chr2R	10585573	intron	psq +	chr2R	10589878	intron	psq +	chr2R	10594184	intron	psq +	chr2R_4_10585001	chr2R_10585001	RAL-821_100b
1200	chr2R	10585578	10585582	chr2R	10594166	10594190	Tirant	5	8602	11.5	14.5	13.0	0.4	8612	chr2R	10585578	intron	psq +	chr2R	10589884	intron	psq +	chr2R	10594190	intron	psq +	chr2R_5_10585001	chr2R_10585001	RAL-821_100b
1202	chr2R	10622329	10622359	chr2R	10637119	10637142	mdg1	9	14788	13.0	9.5	11.2	0.7	14813	chr2R	10622329	intron	CG11883 +	chr2R	10629736	intron	CG11883 +	chr2R	10637142	intron	CG11883 +	chr2R_9_10625001	chr2R_10625001	RAL-821_100b
1218	chr2R	10875611	10875645	chr2R	10875734	10875768	1360	6	120	24.5	29.5	27.0	0.2	157	chr2R	10875611	intergenic	nclb +,CG30016 -	chr2R	10875690	intergenic	nclb +,CG30016 -	chr2R	10875768	5` UTR	nclb +	chr2R_6_10875001	chr2R_10875001	RAL-821_100b
1222	chr2R	10948018	10948021	chr2R	10955587	10955597	17.6	4	7574	3.0	13.5	8.2	0.4	7579	chr2R	10948018	intergenic	not near genes	chr2R	10951808	intergenic	not near genes	chr2R	10955597	intergenic	not near genes	chr2R_4_10950001	chr2R_10950001	RAL-821_100b
1223	chr2R	10948022	10948062	chr2R	10955578	10955611	17.6	32	7569	7.0	9.0	8.0	3.6	7589	chr2R	10948022	intergenic	not near genes	chr2R	10951816	intergenic	not near genes	chr2R	10955611	intergenic	not near genes	chr2R_32_10950001	chr2R_10950001	RAL-821_100b
1226	chr2R	10979641	10979675	chr2R	10980134	10980168	297	14	491	9.0	19.0	14.0	0.9	527	chr2R	10979641	intergenic	not near genes	chr2R	10979904	intergenic	not near genes	chr2R	10980168	intergenic	not near genes	chr2R_14_10975001	chr2R_10975001	RAL-821_100b
1227	chr2R	10979678	10979684	chr2R	10980133	10980152	297	4	477	7.5	18.0	12.8	0.3	474	chr2R	10979678	intergenic	not near genes	chr2R	10979915	intergenic	not near genes	chr2R	10980152	intergenic	not near genes	chr2R_4_10975001	chr2R_10975001	RAL-821_100b
1230	chr2R	11009798	11009844	chr2R	11018992	11019043	roo	21	9192	16.5	15.5	16.0	1.2	9245	chr2R	11009798	intron	luna -	chr2R	11014420	intron	luna -	chr2R	11019043	intron	luna -	chr2R_21_11010001	chr2R_11010001	RAL-821_100b
1231	chr2R	11019866	11019874	chr2R	11024945	11024954	jockey	9	5084	21.0	9.5	15.2	0.6	5088	chr2R	11019866	intron	luna -	chr2R	11022410	intron	luna -	chr2R	11024954	intron	luna -	chr2R_9_11020001	chr2R_11020001	RAL-821_100b
1232	chr2R	11019876	11019911	chr2R	11024940	11024941	jockey	11	5074	7.0	8.5	7.8	1.2	5065	chr2R	11019876	intron	luna -	chr2R	11022408	intron	luna -	chr2R	11024941	intron	luna -	chr2R_11_11020001	chr2R_11020001	RAL-821_100b
1247	chr2R	11207797	11207843	chr2R	11208015	11208061	BS	30	214	19.5	11.5	15.5	1.8	264	chr2R	11207797	intron	shn +	chr2R	11207929	intron	shn +	chr2R	11208061	intron	shn +	chr2R_30_11205001	chr2R_11205001	RAL-821_100b
1249	chr2R	11297616	11297645	chr2R	11301965	11301991	flea	16	4347	6.5	2.0	4.2	3.1	4375	chr2R	11297616	intergenic	CG42336 -	chr2R	11299804	intergenic	not near genes	chr2R	11301991	5` UTR	CG7741 +	chr2R_16_11295001	chr2R_11295001	RAL-821_100b
1254	chr2R	11415505	11415551	chr2R	11418669	11418710	opus	22	3168	8.5	17.0	12.8	1.6	3205	chr2R	11415505	intron	Drip -	chr2R	11417108	intron	Drip -	chr2R	11418710	intron	Drip -	chr2R_22_11415001	chr2R_11415001	RAL-821_100b
1256	chr2R	11471853	11471889	chr2R	11474263	11474300	pogo	10	2410	26.0	30.0	28.0	0.3	2447	chr2R	11471853	intergenic	not near genes	chr2R	11473076	intergenic	not near genes	chr2R	11474300	intergenic	not near genes	chr2R_10_11470001	chr2R_11470001	RAL-821_100b
1257	chr2R	11472626	11472680	chr2R	11473848	11473902	pogo	25	1221	6.5	4.5	5.5	3.8	1276	chr2R	11472626	intergenic	not near genes	chr2R	11473264	intergenic	not near genes	chr2R	11473902	intergenic	not near genes	chr2R_25_11470001	chr2R_11470001	RAL-821_100b
1293	chr2R	12481142	12481149	chr2R	12482949	12482967	roo	10	1819	18.5	16.5	17.5	0.5	1825	chr2R	12481142	exon	Dh44-R2 +	chr2R	12482054	intron	Dh44-R2 +	chr2R	12482967	intron	Dh44-R2 +	chr2R_10_12480001	chr2R_12480001	RAL-821_100b
1294	chr2R	12481150	12481169	chr2R	12482938	12482983	roo	26	1810	13.5	15.5	14.5	1.7	1833	chr2R	12481150	exon	Dh44-R2 +	chr2R	12482066	intron	Dh44-R2 +	chr2R	12482983	intron	Dh44-R2 +	chr2R_26_12480001	chr2R_12480001	RAL-821_100b
1295	chr2R	12501668	12501725	chr2R	12503855	12503896	Rt1c	27	2182	8.5	11.0	9.8	2.5	2228	chr2R	12501668	intron	fdl -	chr2R	12502782	intron	fdl -	chr2R	12503896	intron	fdl -	chr2R_27_12500001	chr2R_12500001	RAL-821_100b
1303	chr2R	12707495	12707547	chr2R	12715886	12715938	roo	26	8390	12.5	10.5	11.5	2.1	8443	chr2R	12707495	intron	CG42663 +	chr2R	12711716	intron	CG42663 +	chr2R	12715938	intron	CG42663 +	chr2R_26_12710001	chr2R_12710001	RAL-821_100b
1306	chr2R	12789273	12789283	chr2R	12797661	12797671	roo	4	8388	28.0	9.0	18.5	0.2	8398	chr2R	12789273	intron,3` UTR	sca +,CR45137 -	chr2R	12793472	intron,intron	sca +,CR45137 -	chr2R	12797671	intron,3` UTR	sca +,CR45137 -	chr2R_4_12790001	chr2R_12790001	RAL-821_100b
1307	chr2R	12789285	12789328	chr2R	12797658	12797661	roo	30	8377	12.5	7.5	10.0	2.7	8376	chr2R	12789285	intron,3` UTR	sca +,CR45137 -	chr2R	12793473	intron,intron	sca +,CR45137 -	chr2R	12797661	intron,3` UTR	sca +,CR45137 -	chr2R_30_12790001	chr2R_12790001	RAL-821_100b
1309	chr2R	12819431	12819436	chr2R	12824525	12824530	jockey	4	5094	21.0	12.0	16.5	0.2	5099	chr2R	12819431	intergenic	not near genes	chr2R	12821980	intergenic	not near genes	chr2R	12824530	intergenic	not near genes	chr2R_4_12820001	chr2R_12820001	RAL-821_100b
1310	chr2R	12819444	12819457	chr2R	12824522	12824534	jockey	11	5087	13.5	11.5	12.5	0.8	5090	chr2R	12819444	intergenic	not near genes	chr2R	12821989	intergenic	not near genes	chr2R	12824534	intergenic	not near genes	chr2R_11_12820001	chr2R_12820001	RAL-821_100b
1311	chr2R	12819460	12819471	chr2R	12824521	12824555	jockey	9	5078	9.5	11.5	10.5	0.8	5095	chr2R	12819460	intergenic	not near genes	chr2R	12822008	intergenic	not near genes	chr2R	12824555	intergenic	not near genes	chr2R_9_12820001	chr2R_12820001	RAL-821_100b
1312	chr2R	12819472	12819478	chr2R	12824520	12824562	jockey	4	5078	8.5	11.5	10.0	0.4	5090	chr2R	12819472	intergenic	not near genes	chr2R	12822017	intergenic	not near genes	chr2R	12824562	intergenic	not near genes	chr2R_4_12820001	chr2R_12820001	RAL-821_100b
1320	chr2R	13136820	13136864	chr2R	13141643	13141679	Doc	36	4820	19.5	17.0	18.2	1.9	4859	chr2R	13136820	exon	Cap-G +	chr2R	13139250	intron	Cap-G +	chr2R	13141679	intron	Cap-G +	chr2R_36_13135001	chr2R_13135001	RAL-821_100b
1344	chr2R	13580477	13580486	chr2R	13580852	13580861	jockey	4	375	23.5	13.0	18.2	0.2	384	chr2R	13580477	3` UTR	CG6191 -	chr2R	13580669	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580861	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_4_13580001	chr2R_13580001	RAL-821_100b
1345	chr2R	13580487	13580531	chr2R	13580849	13580851	jockey	31	370	12.0	11.5	11.8	2.4	364	chr2R	13580487	3` UTR	CG6191 -	chr2R	13580669	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580851	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_31_13580001	chr2R_13580001	RAL-821_100b
1357	chr2R	13728111	13728149	chr2R	13735797	13735834	opus	16	7685	7.0	12.5	9.8	1.5	7723	chr2R	13728111	intron	fas +	chr2R	13731972	intron	fas +	chr2R	13735834	intron	fas +	chr2R_16_13730001	chr2R_13730001	RAL-821_100b
1367	chr2R	13905582	13905629	chr2R	13907584	13907629	Rt1a	21	2003	13.0	14.5	13.8	1.4	2047	chr2R	13905582	intron	shot -	chr2R	13906606	intron	shot -	chr2R	13907629	intron	shot -	chr2R_21_13905001	chr2R_13905001	RAL-821_100b
1385	chr2R	14394205	14394252	chr2R	14399019	14399108	Doc	19	4834	10.0	3.5	6.8	2.4	4903	chr2R	14394205	intergenic	not near genes	chr2R	14396656	intergenic	not near genes	chr2R	14399108	intergenic	not near genes	chr2R_19_14395001	chr2R_14395001	RAL-821_100b
1387	chr2R	14467280	14467327	chr2R	14476463	14476510	roo	38	9180	8.5	17.5	13.0	2.7	9230	chr2R	14467280	intergenic	not near genes	chr2R	14471895	intergenic	not near genes	chr2R	14476510	5` UTR	CR44462 +	chr2R_38_14470001	chr2R_14470001	RAL-821_100b
1388	chr2R	14497365	14497386	chr2R	14498553	14498577	1360	16	1188	11.0	6.0	8.5	1.7	1212	chr2R	14497365	3` UTR	Cpsf160 -	chr2R	14497971	intron	Cpsf160 -	chr2R	14498577	3` UTR	Cpsf160 -	chr2R_16_14495001	chr2R_14495001	RAL-821_100b
1389	chr2R	14497387	14497416	chr2R	14498552	14498602	1360	11	1184	3.5	5.5	4.5	2.0	1215	chr2R	14497387	3` UTR	Cpsf160 -	chr2R	14497994	intron	Cpsf160 -	chr2R	14498602	3` UTR	Cpsf160 -	chr2R_11_14495001	chr2R_14495001	RAL-821_100b
1425	chr2R	14889189	14889201	chr2R	14897822	14897834	Max-element	12	8633	24.5	0.5	12.5	0.9	8645	chr2R	14889189	intergenic	Cyp6a8 -	chr2R	14893512	intergenic	not near genes	chr2R	14897834	intergenic	not near genes	chr2R_12_14890001	chr2R_14890001	RAL-821_100b
1426	chr2R	14889203	14889212	chr2R	14897821	14897845	Max-element	9	8631	22.5	0.5	11.5	0.7	8642	chr2R	14889203	intergenic	Cyp6a8 -	chr2R	14893524	intergenic	not near genes	chr2R	14897845	intergenic	not near genes	chr2R_9_14890001	chr2R_14890001	RAL-821_100b
1442	chr2R	15004701	15004759	chr2R	15005055	15005118	jockey	27	353	10.5	9.0	9.8	2.5	417	chr2R	15004701	intergenic	not near genes	chr2R	15004910	intergenic	not near genes	chr2R	15005118	intergenic	not near genes	chr2R_27_15000001	chr2R_15000001	RAL-821_100b
1443	chr2R	15015432	15015489	chr2R	15022881	15022934	mdg1	25	7447	8.0	13.0	10.5	2.2	7502	chr2R	15015432	intron	hbs +	chr2R	15019183	intron	hbs +	chr2R	15022934	intron	hbs +	chr2R_25_15015001	chr2R_15015001	RAL-821_100b
1448	chr2R	15084957	15085000	chr2R	15092030	15092060	297	29	7072	16.5	10.5	13.5	2.0	7103	chr2R	15084957	intergenic	not near genes	chr2R	15088508	intergenic	not near genes	chr2R	15092060	5` UTR	CR44457 +	chr2R_29_15085001	chr2R_15085001	RAL-821_100b
1452	chr2R	15119296	15119317	chr2R	15127802	15127823	Tirant	11	8504	24.5	12.5	18.5	0.6	8527	chr2R	15119296	intron	chn +	chr2R	15123560	intron	chn +	chr2R	15127823	intron	chn +	chr2R_11_15120001	chr2R_15120001	RAL-821_100b
1453	chr2R	15119318	15119348	chr2R	15127801	15127849	Tirant	26	8498	10.5	12.5	11.5	2.1	8531	chr2R	15119318	intron	chn +	chr2R	15123584	intron	chn +	chr2R	15127849	intron	chn +	chr2R_26_15120001	chr2R_15120001	RAL-821_100b
1500	chr2R	16061709	16061716	chr2R	16064367	16064374	Burdock	5	2658	19.0	8.5	13.8	0.3	2665	chr2R	16061709	intergenic	not near genes	chr2R	16063042	intergenic	not near genes	chr2R	16064374	intergenic	not near genes	chr2R_5_16060001	chr2R_16060001	RAL-821_100b
1513	chr2R	16539613	16539630	chr2R	16544844	16544861	copia	4	5227	9.0	0.0	4.5	0.7	5248	chr2R	16539613	intergenic	not near genes	chr2R	16542237	intergenic	not near genes	chr2R	16544861	intergenic	not near genes	chr2R_4_16540001	chr2R_16540001	RAL-821_100b
1545	chr2R	17147220	17147264	chr2R	17152276	17152320	jockey	30	5054	15.5	15.0	15.2	1.9	5100	chr2R	17147220	intergenic	not near genes	chr2R	17149770	intergenic	not near genes	chr2R	17152320	intergenic	not near genes	chr2R_30_17145001	chr2R_17145001	RAL-821_100b
1549	chr2R	17176352	17176383	chr2R	17182567	17182598	diver	15	6215	1.5	18.0	9.8	1.4	6246	chr2R	17176352	intergenic	not near genes	chr2R	17179475	intergenic	not near genes	chr2R	17182598	intergenic	not near genes	chr2R_15_17175001	chr2R_17175001	RAL-821_100b
1551	chr2R	17236485	17236537	chr2R	17241714	17241741	copia	32	5227	8.5	13.0	10.8	2.7	5256	chr2R	17236485	intron	mbl +	chr2R	17239113	intron	mbl +	chr2R	17241741	intron	mbl +	chr2R_32_17235001	chr2R_17235001	RAL-821_100b
1561	chr2R	17485897	17485918	chr2R	17490692	17490699	F-element	5	4791	22.5	10.5	16.5	0.3	4802	chr2R	17485897	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488298	intron	NT5E-2 +	chr2R	17490699	intron	NT5E-2 +	chr2R_5_17485001	chr2R_17485001	RAL-821_100b
1562	chr2R	17485922	17485946	chr2R	17490679	17490731	F-element	12	4787	10.0	5.5	7.8	1.4	4809	chr2R	17485922	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488326	intron	NT5E-2 +	chr2R	17490731	intron	NT5E-2 +	chr2R_12_17485001	chr2R_17485001	RAL-821_100b
1573	chr2R	17782338	17782391	chr2R	17783566	17783619	pogo	23	1227	7.0	7.5	7.2	2.8	1281	chr2R	17782338	intergenic	CG33981 -,fab1 -	chr2R	17782978	intergenic	not near genes	chr2R	17783619	intergenic	mir-31a -	chr2R_23_17780001	chr2R_17780001	RAL-821_100b
1574	chr2R	17784003	17784057	chr2R	17784269	17784323	pogo	43	258	10.0	16.5	13.2	3.0	320	chr2R	17784003	intergenic	mir-31a -	chr2R	17784163	intergenic	mir-31a -	chr2R	17784323	intergenic	mir-31a -	chr2R_43_17780001	chr2R_17780001	RAL-821_100b
1583	chr2R	18045658	18045702	chr2R	18046027	18046079	jockey	20	374	5.0	4.5	4.8	3.4	421	chr2R	18045658	intergenic	not near genes	chr2R	18045868	intergenic	not near genes	chr2R	18046079	intergenic	CG5767 -	chr2R_20_18045001	chr2R_18045001	RAL-821_100b
1587	chr2R	18111662	18111712	chr2R	18115555	18115605	F-element	18	3892	9.5	4.5	7.0	2.2	3943	chr2R	18111662	intergenic	not near genes	chr2R	18113634	intergenic	not near genes	chr2R	18115605	intergenic	not near genes	chr2R_18_18110001	chr2R_18110001	RAL-821_100b
1604	chr2R	18358372	18358420	chr2R	18372604	18372658	roo	28	14232	10.0	11.0	10.5	2.4	14286	chr2R	18358372	intergenic	not near genes	chr2R	18365515	intergenic	not near genes	chr2R	18372658	intergenic	not near genes	chr2R_28_18365001	chr2R_18365001	RAL-821_100b
1626	chr2R	18487813	18487850	chr2R	18495289	18495345	blood	12	7477	1.0	10.0	5.5	1.8	7532	chr2R	18487813	intron	CG30116 -	chr2R	18491579	intron	CG30116 -	chr2R	18495345	intron	CG30116 -	chr2R_12_18490001	chr2R_18490001	RAL-821_100b
1634	chr2R	18575772	18575809	chr2R	18581985	18582012	3S18	11	6207	18.5	11.0	14.8	0.7	6240	chr2R	18575772	intron	GEFmeso -	chr2R	18578892	intron	GEFmeso -	chr2R	18582012	intron	GEFmeso -	chr2R_11_18575001	chr2R_18575001	RAL-821_100b
1635	chr2R	18575810	18575830	chr2R	18581983	18582043	3S18	34	6199	12.0	10.5	11.2	2.8	6233	chr2R	18575810	intron	GEFmeso -	chr2R	18578926	intron	GEFmeso -	chr2R	18582043	intron	GEFmeso -	chr2R_34_18575001	chr2R_18575001	RAL-821_100b
1636	chr2R	18590843	18590894	chr2R	18600020	18600071	roo	31	9174	10.0	8.5	9.2	3.0	9228	chr2R	18590843	intron	GEFmeso -	chr2R	18595457	intron	GEFmeso -	chr2R	18600071	intron	GEFmeso -	chr2R_31_18595001	chr2R_18595001	RAL-821_100b
1682	chr2R	19715831	19715857	chr2R	19723325	19723351	blood	23	7493	21.5	11.5	16.5	1.3	7520	chr2R	19715831	intergenic	not near genes	chr2R	19719591	intergenic	not near genes	chr2R	19723351	intergenic	not near genes	chr2R_23_19715001	chr2R_19715001	RAL-821_100b
1684	chr2R	19776568	19776624	chr2R	19779916	19779941	jockey	31	3344	12.5	10.0	11.2	2.5	3373	chr2R	19776568	intergenic	not near genes	chr2R	19778254	intergenic	not near genes	chr2R	19779941	intergenic	not near genes	chr2R_31_19775001	chr2R_19775001	RAL-821_100b
1687	chr2R	19914823	19914877	chr2R	19922260	19922314	mdg1	24	7436	6.5	10.0	8.2	2.6	7491	chr2R	19914823	intergenic	not near genes	chr2R	19918568	intergenic	not near genes	chr2R	19922314	intergenic	not near genes	chr2R_24_19915001	chr2R_19915001	RAL-821_100b
1688	chr2R	19957408	19957444	chr2R	19962635	19962671	copia	22	5223	14.0	15.0	14.5	1.4	5263	chr2R	19957408	intergenic	CG44623 +	chr2R	19960040	intergenic	not near genes	chr2R	19962671	intergenic	not near genes	chr2R_22_19960001	chr2R_19960001	RAL-821_100b
1689	chr2R	19957446	19957462	chr2R	19962632	19962667	copia	10	5214	10.0	12.5	11.2	0.8	5221	chr2R	19957446	intergenic	CG44623 +	chr2R	19960056	intergenic	not near genes	chr2R	19962667	intergenic	not near genes	chr2R_10_19960001	chr2R_19960001	RAL-821_100b
1692	chr2R	20069209	20069249	chr2R	20071873	20071914	opus	18	2659	3.0	9.0	6.0	2.6	2705	chr2R	20069209	intergenic	not near genes	chr2R	20070562	intergenic	not near genes	chr2R	20071914	intergenic	not near genes	chr2R_18_20070001	chr2R_20070001	RAL-821_100b
1732	chr2R	20739420	20739474	chr2R	20744213	20744267	F-element	29	4790	12.0	10.5	11.2	2.4	4847	chr2R	20739420	intron	dpr +	chr2R	20741844	intron	dpr +	chr2R	20744267	intron	dpr +	chr2R_29_20740001	chr2R_20740001	RAL-821_100b
1735	chr2R	20783286	20783331	chr2R	20788083	20788121	F-element	24	4795	7.5	14.5	11.0	2.0	4835	chr2R	20783286	intergenic	not near genes	chr2R	20785704	intergenic	not near genes	chr2R	20788121	intergenic	CG43666 -	chr2R_24_20785001	chr2R_20785001	RAL-821_100b
1757	chr2R	21151135	21151145	chr2R	21153793	21153803	opus	10	2658	1.0	22.0	11.5	0.8	2668	chr2R	21151135	intron	CG30389 -	chr2R	21152469	intron	CG30389 -	chr2R	21153803	intron	CG30389 -	chr2R_10_21150001	chr2R_21150001	RAL-821_100b
1795	chr2R	21738266	21738311	chr2R	21747441	21747449	roo	21	9166	7.5	12.0	9.8	1.9	9183	chr2R	21738266	intergenic	not near genes	chr2R	21742858	intergenic	not near genes	chr2R	21747449	intergenic	not near genes	chr2R_21_21740001	chr2R_21740001	RAL-821_100b
1797	chr2R	21753059	21753116	chr2R	21753569	21753615	roo	31	508	9.0	9.0	9.0	3.1	556	chr2R	21753059	intergenic	not near genes	chr2R	21753337	intergenic	not near genes	chr2R	21753615	intergenic	not near genes	chr2R_31_21750001	chr2R_21750001	RAL-821_100b
1801	chr2R	21809496	21809514	chr2R	21817762	21817780	roo	17	8265	10.0	10.0	10.0	1.5	8284	chr2R	21809496	intergenic	not near genes	chr2R	21813638	intergenic	not near genes	chr2R	21817780	intergenic	not near genes	chr2R_17_21810001	chr2R_21810001	RAL-821_100b
1835	chr2R	22349669	22349722	chr2R	22351478	22351500	jockey	30	1805	11.5	13.0	12.2	2.3	1831	chr2R	22349669	intron	Liprin-gamma -	chr2R	22350584	intron	Liprin-gamma -	chr2R	22351500	intron	Liprin-gamma -	chr2R_30_22350001	chr2R_22350001	RAL-821_100b
1838	chr2R	22360360	22360370	chr2R	22360818	22360828	jockey	10	458	20.0	9.0	14.5	0.6	468	chr2R	22360360	intron	Liprin-gamma -	chr2R	22360594	intron	Liprin-gamma -	chr2R	22360828	intron	Liprin-gamma -	chr2R_10_22360001	chr2R_22360001	RAL-821_100b
1839	chr2R	22360372	22360414	chr2R	22360811	22360831	jockey	7	436	9.0	6.0	7.5	0.8	459	chr2R	22360372	intron	Liprin-gamma -	chr2R	22360602	intron	Liprin-gamma -	chr2R	22360831	intron	Liprin-gamma -	chr2R_7_22360001	chr2R_22360001	RAL-821_100b
1844	chr2R	22465294	22465324	chr2R	22465512	22465535	BS	14	217	33.0	3.0	18.0	0.7	241	chr2R	22465294	intron	CG10384 +	chr2R	22465414	intron	CG10384 +	chr2R	22465535	intron	CG10384 +	chr2R_14_22465001	chr2R_22465001	RAL-821_100b
1849	chr2R	22525727	22525787	chr2R	22529307	22529371	jockey	47	3580	8.0	11.0	9.5	4.5	3644	chr2R	22525727	intron	px -	chr2R	22527549	intron	px -	chr2R	22529371	intron	px -	chr2R_47_22525001	chr2R_22525001	RAL-821_100b
1851	chr2R	22580427	22580443	chr2R	22586602	22586618	diver	10	6174	0.5	10.0	5.2	1.6	6191	chr2R	22580427	intron	dnr1 -	chr2R	22583522	intron	dnr1 -	chr2R	22586618	intron	dnr1 -	chr2R_10_22580001	chr2R_22580001	RAL-821_100b
1857	chr2R	22774938	22774993	chr2R	22775382	22775437	jockey	11	443	21.0	9.5	15.2	0.7	499	chr2R	22774938	intron	CG42260 -	chr2R	22775188	intron	CG42260 -	chr2R	22775437	intron	CG42260 -	chr2R_11_22775001	chr2R_22775001	RAL-821_100b
1864	chr2R	22843017	22843028	chr2R	22845003	22845015	flea	4	1987	27.5	15.5	21.5	0.2	1998	chr2R	22843017	intergenic	CG9826 +	chr2R	22844016	intergenic	not near genes	chr2R	22845015	intergenic	not near genes	chr2R_4_22840001	chr2R_22840001	RAL-821_100b
1865	chr2R	22843029	22843052	chr2R	22844985	22845039	flea	11	1984	19.5	11.0	15.2	0.7	2010	chr2R	22843029	intergenic	CG9826 +	chr2R	22844034	intergenic	not near genes	chr2R	22845039	intergenic	not near genes	chr2R_11_22840001	chr2R_22840001	RAL-821_100b
1893	chr2R	23402584	23402638	chr2R	23407685	23407739	flea	22	5099	7.5	13.0	10.2	2.0	5155	chr2R	23402584	intergenic	CG3520 -	chr2R	23405162	intergenic	not near genes	chr2R	23407739	intergenic	not near genes	chr2R_22_23405001	chr2R_23405001	RAL-821_100b
1900	chr2R	23529550	23529607	chr2R	23537149	23537183	412	33	7586	8.0	15.5	11.8	2.6	7633	chr2R	23529550	intron	bw -	chr2R	23533366	intron	bw -	chr2R	23537183	exon	bw -	chr2R_33_23530001	chr2R_23530001	RAL-821_100b
1909	chr2R	23914283	23914332	chr2R	23921925	23921981	412	29	7646	8.5	19.5	14.0	1.9	7698	chr2R	23914283	exon	kcc +	chr2R	23918132	intron	kcc +	chr2R	23921981	exon	kcc +	chr2R_29_23915001	chr2R_23915001	RAL-821_100b
1914	chr2R	24147043	24147095	chr2R	24154645	24154682	412	30	7600	9.5	14.0	11.8	2.3	7639	chr2R	24147043	intron	Dat +	chr2R	24150862	intron	Dat +	chr2R	24154682	intron	Dat +	chr2R_30_24150001	chr2R_24150001	RAL-821_100b
1915	chr2R	24177209	24177264	chr2R	24184719	24184774	412	34	7508	8.5	6.0	7.2	4.1	7565	chr2R	24177209	3` UTR	Nop60B +	chr2R	24180992	intron	Nop60B +	chr2R	24184774	3` UTR	Nop60B +	chr2R_34_24180001	chr2R_24180001	RAL-821_100b
1916	chr2R	24272803	24272814	chr2R	24272906	24272912	roo	5	99	42.5	43.0	42.8	0.1	109	chr2R	24272803	intergenic	not near genes	chr2R	24272858	intergenic	not near genes	chr2R	24272912	intergenic	not near genes	chr2R_5_24270001	chr2R_24270001	RAL-821_100b
1923	chr2R	24353413	24353459	chr2R	24361790	24361821	roo	24	8384	9.0	4.5	6.8	3.1	8408	chr2R	24353413	intron,intron	bs +,CR44811 -	chr2R	24357617	intron,intron	bs +,CR44811 -	chr2R	24361821	intron,intron	bs +,CR44811 -	chr2R_24_24355001	chr2R_24355001	RAL-821_100b
1935	chr2R	24647548	24647613	chr2R	24655144	24655190	412	31	7586	7.0	9.5	8.2	3.4	7642	chr2R	24647548	intergenic	not near genes	chr2R	24651369	intergenic	not near genes	chr2R	24655190	intergenic	not near genes	chr2R_31_24650001	chr2R_24650001	RAL-821_100b
1937	chr2R	24727874	24727885	chr2R	24735393	24735418	mdg1	7	7530	12.0	13.5	12.8	0.5	7544	chr2R	24727874	intron	Mid1 -	chr2R	24731646	intron	Mid1 -	chr2R	24735418	intron	Mid1 -	chr2R_7_24730001	chr2R_24730001	RAL-821_100b
1938	chr2R	24727886	24727918	chr2R	24735392	24735422	mdg1	32	7521	6.0	13.5	9.8	3.0	7536	chr2R	24727886	intron	Mid1 -	chr2R	24731654	intron	Mid1 -	chr2R	24735422	intron	Mid1 -	chr2R_32_24730001	chr2R_24730001	RAL-821_100b
1939	chr2R	24763586	24763601	chr2R	24765587	24765592	G2	8	1994	26.0	13.5	19.8	0.4	2006	chr2R	24763586	exon	CG3894 +	chr2R	24764589	intron	CG3894 +	chr2R	24765592	exon	CG3894 +	chr2R_8_24760001	chr2R_24760001	RAL-821_100b
1940	chr2R	24763602	24763615	chr2R	24765585	24765601	G2	14	1993	22.0	12.5	17.2	0.8	1999	chr2R	24763602	exon	CG3894 +	chr2R	24764602	intron	CG3894 +	chr2R	24765601	exon	CG3894 +	chr2R_14_24760001	chr2R_24760001	RAL-821_100b
1941	chr2R	24763618	24763643	chr2R	24765584	24765644	G2	17	1991	11.0	11.5	11.2	1.4	2026	chr2R	24763618	exon	CG3894 +	chr2R	24764631	intron	CG3894 +	chr2R	24765644	exon	CG3894 +	chr2R_17_24760001	chr2R_24760001	RAL-821_100b
1945	chr2R	24919075	24919119	chr2R	24919351	24919398	1360	13	279	42.5	24.0	33.2	0.4	323	chr2R	24919075	3` UTR	NaCP60E +	chr2R	24919236	3` UTR	NaCP60E +	chr2R	24919398	3` UTR	NaCP60E +	chr2R_13_24915001	chr2R_24915001	RAL-821_100b
1959	chr2R	25141633	25141681	chr2R	25159348	25159396	roo	24	17714	8.5	11.5	10.0	2.2	17763	chr2R	25141633	intergenic	not near genes	chr2R	25150514	intergenic	not near genes	chr2R	25159396	intergenic	not near genes	chr2R_24_25150001	chr2R_25150001	RAL-821_100b
1970	chr3L	110186	110243	chr3L	119378	119427	roo	40	9190	6.5	12.0	9.2	3.9	9241	chr3L	110186	intergenic	not near genes	chr3L	114806	intergenic	not near genes	chr3L	119427	intergenic	not near genes	chr3L_40_110001	chr3L_110001	RAL-821_100b
1975	chr3L	402664	402677	chr3L	409742	409754	297	15	7077	39.5	19.0	29.2	0.5	7090	chr3L	402664	intergenic	not near genes	chr3L	406209	intergenic	not near genes	chr3L	409754	intergenic	not near genes	chr3L_15_405001	chr3L_405001	RAL-821_100b
1976	chr3L	402678	402718	chr3L	409740	409785	297	49	7072	20.0	19.0	19.5	2.4	7107	chr3L	402678	intergenic	not near genes	chr3L	406232	intergenic	not near genes	chr3L	409785	intergenic	not near genes	chr3L_49_405001	chr3L_405001	RAL-821_100b
1993	chr3L	789887	789947	chr3L	790397	790458	roo	14	508	5.5	0.0	2.8	3.7	571	chr3L	789887	intergenic	not near genes	chr3L	790172	intergenic	not near genes	chr3L	790458	intergenic	not near genes	chr3L_14_790001	chr3L_790001	RAL-821_100b
2000	chr3L	857976	858026	chr3L	866482	866491	Tirant	26	8497	10.0	16.0	13.0	1.9	8515	chr3L	857976	intergenic	not near genes	chr3L	862234	intergenic	not near genes	chr3L	866491	intergenic	CG12502 +	chr3L_26_860001	chr3L_860001	RAL-821_100b
2003	chr3L	925159	925205	chr3L	932605	932656	mdg1	33	7448	7.5	12.0	9.8	3.1	7497	chr3L	925159	intron	Glut1 +	chr3L	928908	intron	Glut1 +	chr3L	932656	intron	Glut1 +	chr3L_33_925001	chr3L_925001	RAL-821_100b
2005	chr3L	939752	939789	chr3L	940898	940925	jockey	25	1143	17.0	16.0	16.5	1.4	1173	chr3L	939752	intron	Glut1 +	chr3L	940338	intron	Glut1 +	chr3L	940925	intron	Glut1 +	chr3L_25_940001	chr3L_940001	RAL-821_100b
2006	chr3L	939791	939804	chr3L	940897	940934	jockey	7	1130	12.0	15.5	13.8	0.5	1143	chr3L	939791	intron	Glut1 +	chr3L	940362	intron	Glut1 +	chr3L	940934	intron	Glut1 +	chr3L_7_940001	chr3L_940001	RAL-821_100b
2015	chr3L	1047331	1047385	chr3L	1055162	1055203	412	27	7826	8.0	9.5	8.8	2.8	7872	chr3L	1047331	intron	bab1 -	chr3L	1051267	intron	bab1 -	chr3L	1055203	intron	bab1 -	chr3L_27_1050001	chr3L_1050001	RAL-821_100b
2017	chr3L	1154109	1154162	chr3L	1163284	1163308	roo	32	9172	7.0	13.5	10.2	2.9	9199	chr3L	1154109	intron	bab2 -	chr3L	1158708	intron	bab2 -	chr3L	1163308	intron	bab2 -	chr3L_32_1155001	chr3L_1155001	RAL-821_100b
2019	chr3L	1219576	1219598	chr3L	1227334	1227349	412	14	7754	19.5	16.0	17.8	0.7	7773	chr3L	1219576	intron	mwh +	chr3L	1223462	intron	mwh +	chr3L	1227349	intron	mwh +	chr3L_14_1220001	chr3L_1220001	RAL-821_100b
2020	chr3L	1219599	1219622	chr3L	1227327	1227370	412	25	7748	13.0	15.0	14.0	1.7	7771	chr3L	1219599	intron	mwh +	chr3L	1223484	intron	mwh +	chr3L	1227370	intron	mwh +	chr3L_25_1220001	chr3L_1220001	RAL-821_100b
2027	chr3L	1485732	1485734	chr3L	1486912	1486926	1360	4	1188	16.0	28.5	22.2	0.2	1194	chr3L	1485732	intron	stet -	chr3L	1486329	intron	stet -	chr3L	1486926	intron	stet -	chr3L_4_1485001	chr3L_1485001	RAL-821_100b
2028	chr3L	1485735	1485743	chr3L	1486910	1486915	1360	11	1181	13.0	28.5	20.8	0.5	1180	chr3L	1485735	intron	stet -	chr3L	1486325	intron	stet -	chr3L	1486915	intron	stet -	chr3L_11_1485001	chr3L_1485001	RAL-821_100b
2029	chr3L	1505979	1505987	chr3L	1513601	1513609	17.6	7	7622	28.5	10.5	19.5	0.3	7630	chr3L	1505979	intron,intron	Psa +,cue -	chr3L	1509794	intron,intron	Psa +,cue -	chr3L	1513609	intron,intron	Psa +,cue -	chr3L_7_1505001	chr3L_1505001	RAL-821_100b
2030	chr3L	1505988	1506017	chr3L	1513594	1513639	17.6	31	7619	15.5	9.0	12.2	2.3	7651	chr3L	1505988	intron,intron	Psa +,cue -	chr3L	1509814	intron,intron	Psa +,cue -	chr3L	1513639	intron,intron	Psa +,cue -	chr3L_31_1505001	chr3L_1505001	RAL-821_100b
2031	chr3L	1506019	1506032	chr3L	1513592	1513643	17.6	15	7611	7.5	8.0	7.8	1.7	7624	chr3L	1506019	intron,intron	Psa +,cue -	chr3L	1509831	intron,intron	Psa +,cue -	chr3L	1513643	intron,intron	Psa +,cue -	chr3L_15_1505001	chr3L_1505001	RAL-821_100b
2038	chr3L	1740843	1740872	chr3L	1741103	1741140	pogo	20	265	14.5	23.5	19.0	1.0	297	chr3L	1740843	intron	Gk +	chr3L	1740992	intron	Gk +	chr3L	1741140	intron	Gk +	chr3L_20_1740001	chr3L_1740001	RAL-821_100b
2039	chr3L	1740873	1740885	chr3L	1741096	1741130	pogo	11	249	9.5	19.0	14.2	0.7	257	chr3L	1740873	intron	Gk +	chr3L	1741002	intron	Gk +	chr3L	1741130	intron	Gk +	chr3L_11_1740001	chr3L_1740001	RAL-821_100b
2061	chr3L	2447481	2447538	chr3L	2456662	2456694	roo	46	9175	16.5	16.0	16.2	2.7	9213	chr3L	2447481	intron	CG45186 +	chr3L	2452088	intron	CG45186 +	chr3L	2456694	intron	CG45186 +	chr3L_46_2450001	chr3L_2450001	RAL-821_100b
2077	chr3L	2751435	2751448	chr3L	2755755	2755768	F-element	5	4320	16.0	23.5	19.8	0.2	4333	chr3L	2751435	intron	Mrtf -	chr3L	2753602	intron	Mrtf -	chr3L	2755768	intron	Mrtf -	chr3L_5_2750001	chr3L_2750001	RAL-821_100b
2078	chr3L	2751449	2751460	chr3L	2755749	2755780	F-element	8	4318	15.5	19.0	17.2	0.4	4331	chr3L	2751449	intron	Mrtf -	chr3L	2753614	intron	Mrtf -	chr3L	2755780	intron	Mrtf -	chr3L_8_2750001	chr3L_2750001	RAL-821_100b
2082	chr3L	2927814	2927871	chr3L	2936116	2936173	Tirant	33	8300	9.5	13.0	11.2	2.7	8359	chr3L	2927814	intron	Shab +	chr3L	2931994	intron	Shab +	chr3L	2936173	intron	Shab +	chr3L_33_2930001	chr3L_2930001	RAL-821_100b
2083	chr3L	2966695	2966714	chr3L	2974147	2974166	mdg1	5	7452	21.0	0.0	10.5	0.4	7471	chr3L	2966695	intergenic	not near genes	chr3L	2970430	intergenic	not near genes	chr3L	2974166	intergenic	not near genes	chr3L_5_2970001	chr3L_2970001	RAL-821_100b
2087	chr3L	3040308	3040327	chr3L	3042122	3042125	S-element	4	1808	16.5	0.0	8.2	0.4	1817	chr3L	3040308	3` UTR	CG2162 +	chr3L	3041216	intergenic	not near genes	chr3L	3042125	intergenic	Jafrac2 +	chr3L_4_3040001	chr3L_3040001	RAL-821_100b
2088	chr3L	3040329	3040356	chr3L	3042114	3042174	S-element	6	1800	8.0	0.0	4.0	1.2	1845	chr3L	3040329	3` UTR	CG2162 +	chr3L	3041252	intergenic	not near genes	chr3L	3042174	intergenic	Jafrac2 +	chr3L_6_3040001	chr3L_3040001	RAL-821_100b
2089	chr3L	3051718	3051751	chr3L	3051985	3052010	pogo	11	265	23.5	7.0	15.2	0.7	292	chr3L	3051718	3` UTR	CG32485 +	chr3L	3051864	intergenic	CG32485 +	chr3L	3052010	intergenic	CG32485 +	chr3L_11_3050001	chr3L_3050001	RAL-821_100b
2090	chr3L	3061266	3061315	chr3L	3069867	3069912	Tirant	34	8604	13.5	14.5	14.0	2.3	8646	chr3L	3061266	intron	CG32486 -	chr3L	3065589	intron	CG32486 -	chr3L	3069912	intron	CG32486 -	chr3L_34_3065001	chr3L_3065001	RAL-821_100b
2099	chr3L	3281428	3281436	chr3L	3281939	3281956	Doc	5	518	24.0	16.5	20.2	0.2	528	chr3L	3281428	intron	CG12017 +	chr3L	3281692	intron	CG12017 +	chr3L	3281956	intron	CG12017 +	chr3L_5_3280001	chr3L_3280001	RAL-821_100b
2100	chr3L	3281437	3281452	chr3L	3281936	3281963	Doc	7	513	17.0	15.5	16.2	0.4	526	chr3L	3281437	intron	CG12017 +	chr3L	3281700	intron	CG12017 +	chr3L	3281963	intron	CG12017 +	chr3L_7_3280001	chr3L_3280001	RAL-821_100b
2101	chr3L	3281454	3281454	chr3L	3281935	3281965	Doc	8	497	17.0	15.5	16.2	0.5	511	chr3L	3281454	intron	CG12017 +	chr3L	3281710	intron	CG12017 +	chr3L	3281965	intron	CG12017 +	chr3L_8_3280001	chr3L_3280001	RAL-821_100b
2102	chr3L	3281455	3281470	chr3L	3281931	3281976	Doc	19	511	12.0	12.5	12.2	1.4	521	chr3L	3281455	intron	CG12017 +	chr3L	3281716	intron	CG12017 +	chr3L	3281976	intron	CG12017 +	chr3L_19_3280001	chr3L_3280001	RAL-821_100b
2106	chr3L	3475058	3475065	chr3L	3475521	3475534	jockey	7	466	25.5	15.0	20.2	0.3	476	chr3L	3475058	intron	CG42324 +	chr3L	3475296	intron	CG42324 +	chr3L	3475534	intron	CG42324 +	chr3L_7_3475001	chr3L_3475001	RAL-821_100b
2107	chr3L	3475068	3475086	chr3L	3475519	3475555	jockey	21	463	18.0	13.0	15.5	1.3	487	chr3L	3475068	intron	CG42324 +	chr3L	3475312	intron	CG42324 +	chr3L	3475555	intron	CG42324 +	chr3L_21_3475001	chr3L_3475001	RAL-821_100b
2108	chr3L	3475087	3475098	chr3L	3475516	3475516	jockey	12	461	15.0	11.5	13.2	0.8	429	chr3L	3475087	intron	CG42324 +	chr3L	3475302	intron	CG42324 +	chr3L	3475516	intron	CG42324 +	chr3L_12_3475001	chr3L_3475001	RAL-821_100b
2116	chr3L	3601276	3601331	chr3L	3606612	3606667	copia	22	5336	12.5	11.0	11.8	1.7	5391	chr3L	3601276	intron	Eip63E +	chr3L	3603972	intron	Eip63E +	chr3L	3606667	intron	Eip63E +	chr3L_22_3600001	chr3L_3600001	RAL-821_100b
2130	chr3L	3833718	3833770	chr3L	3833984	3834036	pogo	15	263	7.0	5.0	6.0	2.1	318	chr3L	3833718	intron	enc +	chr3L	3833877	intron	enc +	chr3L	3834036	intron	enc +	chr3L_15_3830001	chr3L_3830001	RAL-821_100b
2146	chr3L	4328714	4328760	chr3L	4336237	4336269	412	18	7522	8.0	15.0	11.5	1.4	7555	chr3L	4328714	intron	Cip4 -	chr3L	4332492	intron	Cip4 -	chr3L	4336269	exon	Cip4 -	chr3L_18_4330001	chr3L_4330001	RAL-821_100b
2168	chr3L	4901106	4901160	chr3L	4907318	4907375	diver	12	6214	10.0	7.5	8.8	1.2	6269	chr3L	4901106	intergenic	CG13704 +	chr3L	4904240	intergenic	not near genes	chr3L	4907375	intergenic	not near genes	chr3L_12_4900001	chr3L_4900001	RAL-821_100b
2173	chr3L	5034134	5034162	chr3L	5043311	5043329	roo	15	9175	19.0	12.0	15.5	0.9	9195	chr3L	5034134	intron	Con -	chr3L	5038732	intron	Con -	chr3L	5043329	intron	Con -	chr3L_15_5035001	chr3L_5035001	RAL-821_100b
2174	chr3L	5034163	5034188	chr3L	5043309	5043365	roo	16	9173	11.0	12.0	11.5	1.3	9202	chr3L	5034163	intron	Con -	chr3L	5038764	intron	Con -	chr3L	5043365	intron	Con -	chr3L_16_5035001	chr3L_5035001	RAL-821_100b
2175	chr3L	5045440	5045478	chr3L	5050246	5050284	Doc	16	4805	8.5	12.0	10.2	1.4	4844	chr3L	5045440	intron	Con -	chr3L	5047862	intron	Con -	chr3L	5050284	intron	Con -	chr3L_16_5045001	chr3L_5045001	RAL-821_100b
2185	chr3L	5299134	5299180	chr3L	5306592	5306641	Quasimodo	22	7460	6.0	9.5	7.8	2.5	7507	chr3L	5299134	intergenic	not near genes	chr3L	5302888	intergenic	not near genes	chr3L	5306641	intergenic	not near genes	chr3L_22_5300001	chr3L_5300001	RAL-821_100b
2197	chr3L	5537696	5537752	chr3L	5538063	5538119	jockey	31	361	11.0	13.0	12.0	2.4	423	chr3L	5537696	intergenic	not near genes	chr3L	5537908	intergenic	not near genes	chr3L	5538119	intergenic	CG10625 -	chr3L_31_5535001	chr3L_5535001	RAL-821_100b
2203	chr3L	5910008	5910063	chr3L	5910274	5910313	pogo	32	265	9.0	12.5	10.8	2.7	305	chr3L	5910008	intron	CG13288 +	chr3L	5910160	intron	CG13288 +	chr3L	5910313	intron	CG13288 +	chr3L_32_5910001	chr3L_5910001	RAL-821_100b
2204	chr3L	5926304	5926326	chr3L	5926508	5926541	BS	26	212	13.5	14.0	13.8	1.8	237	chr3L	5926304	intron	Vap-33B +	chr3L	5926422	intron	Vap-33B +	chr3L	5926541	intron	Vap-33B +	chr3L_26_5925001	chr3L_5925001	RAL-821_100b
2205	chr3L	5926328	5926349	chr3L	5926504	5926518	BS	15	208	9.0	13.0	11.0	1.2	190	chr3L	5926328	intron	Vap-33B +	chr3L	5926423	intron	Vap-33B +	chr3L	5926518	intron	Vap-33B +	chr3L_15_5925001	chr3L_5925001	RAL-821_100b
2209	chr3L	6001659	6001714	chr3L	6004384	6004439	jockey	28	2724	0.5	3.0	1.8	10.0	2780	chr3L	6001659	intron	PVRAP +	chr3L	6003049	intron	PVRAP +	chr3L	6004439	intron	PVRAP +	chr3L_28_6000001	chr3L_6000001	RAL-821_100b
2212	chr3L	6040342	6040394	chr3L	6042723	6042775	Doc	27	2379	7.5	10.0	8.8	2.8	2433	chr3L	6040342	intergenic	Jon65Aiv +	chr3L	6041558	intergenic	not near genes	chr3L	6042775	intergenic	not near genes	chr3L_27_6040001	chr3L_6040001	RAL-821_100b
2220	chr3L	6220890	6220945	chr3L	6230067	6230122	roo	37	9175	15.0	14.0	14.5	2.4	9232	chr3L	6220890	5` UTR	pncr008:3L +	chr3L	6225506	intergenic	not near genes	chr3L	6230122	intergenic	not near genes	chr3L_37_6225001	chr3L_6225001	RAL-821_100b
2222	chr3L	6334983	6335037	chr3L	6335479	6335533	297	40	491	14.5	12.5	13.5	2.8	550	chr3L	6334983	intron	CG13300 -	chr3L	6335258	intron	CG13300 -	chr3L	6335533	intron	CG13300 -	chr3L_40_6335001	chr3L_6335001	RAL-821_100b
2226	chr3L	6405639	6405681	chr3L	6432128	6432170	roo	15	26489	10.5	10.0	10.2	1.3	26531	chr3L	6405639	intron	CG42747 +	chr3L	6418904	intron	CG42747 +	chr3L	6432170	intron	CG42747 +	chr3L_15_6415001	chr3L_6415001	RAL-821_100b
2233	chr3L	6620589	6620606	chr3L	6621054	6621063	Rt1c	17	464	9.5	23.5	16.5	1.0	474	chr3L	6620589	intergenic	not near genes	chr3L	6620826	intergenic	not near genes	chr3L	6621063	intergenic	not near genes	chr3L_17_6620001	chr3L_6620001	RAL-821_100b
2237	chr3L	6781109	6781154	chr3L	6783137	6783189	Doc	15	2036	7.0	0.0	3.5	3.3	2080	chr3L	6781109	intergenic	not near genes	chr3L	6782149	intergenic	not near genes	chr3L	6783189	intergenic	not near genes	chr3L_15_6780001	chr3L_6780001	RAL-821_100b
2239	chr3L	6855895	6855953	chr3L	6860703	6860762	Doc	15	4807	12.5	7.0	9.8	1.4	4867	chr3L	6855895	intergenic	not near genes	chr3L	6858328	intergenic	not near genes	chr3L	6860762	intergenic	not near genes	chr3L_15_6855001	chr3L_6855001	RAL-821_100b
2241	chr3L	6887492	6887536	chr3L	6895009	6895053	roo	14	7515	6.5	6.0	6.2	1.9	7561	chr3L	6887492	intergenic	not near genes	chr3L	6891272	intergenic	not near genes	chr3L	6895053	intergenic	not near genes	chr3L_14_6890001	chr3L_6890001	RAL-821_100b
2244	chr3L	6994888	6994914	chr3L	6995523	6995543	BS	13	634	2.0	9.0	5.5	2.0	655	chr3L	6994888	intergenic	bin +	chr3L	6995216	intergenic	not near genes	chr3L	6995543	intergenic	not near genes	chr3L_13_6995001	chr3L_6995001	RAL-821_100b
2248	chr3L	7129925	7129978	chr3L	7130142	7130195	BS	19	215	8.0	10.5	9.2	1.9	270	chr3L	7129925	intergenic	CG15829 +	chr3L	7130060	intergenic	CG15829 +	chr3L	7130195	intergenic	not near genes	chr3L_19_7130001	chr3L_7130001	RAL-821_100b
2255	chr3L	7377291	7377346	chr3L	7380421	7380476	297	30	3128	12.0	11.5	11.8	2.3	3185	chr3L	7377291	intron	SMSr -	chr3L	7378884	intron	SMSr -	chr3L	7380476	intron	SMSr -	chr3L_30_7375001	chr3L_7375001	RAL-821_100b
2262	chr3L	7498737	7498780	chr3L	7503539	7503582	F-element	27	4801	15.5	9.0	12.2	2.0	4845	chr3L	7498737	5` UTR	CG8539 -	chr3L	7501160	intergenic	not near genes	chr3L	7503582	intergenic	not near genes	chr3L_27_7500001	chr3L_7500001	RAL-821_100b
2263	chr3L	7498783	7498785	chr3L	7503535	7503587	F-element	5	4791	13.5	8.0	10.8	0.4	4804	chr3L	7498783	5` UTR	CG8539 -	chr3L	7501185	intergenic	not near genes	chr3L	7503587	intergenic	not near genes	chr3L_5_7500001	chr3L_7500001	RAL-821_100b
2274	chr3L	7793690	7793713	chr3L	7800767	7800789	297	17	7076	21.0	13.0	17.0	0.9	7099	chr3L	7793690	intron	CG32369 -	chr3L	7797240	intron	CG32369 -	chr3L	7800789	intron	CG32369 -	chr3L_17_7795001	chr3L_7795001	RAL-821_100b
2275	chr3L	7793719	7793737	chr3L	7800763	7800809	297	15	7072	15.0	12.0	13.5	1.0	7090	chr3L	7793719	intron	CG32369 -	chr3L	7797264	intron	CG32369 -	chr3L	7800809	intron	CG32369 -	chr3L_15_7795001	chr3L_7795001	RAL-821_100b
2281	chr3L	7886517	7886522	chr3L	7889060	7889060	Stalker4	5	2542	3.5	11.0	7.2	0.6	2543	chr3L	7886517	intron	CG32365 +	chr3L	7887788	intron	CG32365 +	chr3L	7889060	intron	CG32365 +	chr3L_5_7885001	chr3L_7885001	RAL-821_100b
2282	chr3L	7886527	7886539	chr3L	7889050	7889083	Stalker4	7	2535	3.0	9.0	6.0	1.0	2556	chr3L	7886527	intron	CG32365 +	chr3L	7887805	intron	CG32365 +	chr3L	7889083	intron	CG32365 +	chr3L_7_7885001	chr3L_7885001	RAL-821_100b
2283	chr3L	7886540	7886547	chr3L	7889043	7889086	Stalker4	10	2535	3.0	7.0	5.0	1.7	2546	chr3L	7886540	intron	CG32365 +	chr3L	7887813	intron	CG32365 +	chr3L	7889086	intron	CG32365 +	chr3L_10_7885001	chr3L_7885001	RAL-821_100b
2284	chr3L	7916810	7916859	chr3L	7926006	7926055	roo	29	9195	6.0	10.5	8.2	3.2	9245	chr3L	7916810	3` UTR	syd -	chr3L	7921432	intron	syd -	chr3L	7926055	3` UTR	syd -	chr3L_29_7920001	chr3L_7920001	RAL-821_100b
2285	chr3L	7985349	7985395	chr3L	7987703	7987749	NOF	23	2354	7.5	17.5	12.5	1.7	2400	chr3L	7985349	intron	nmo +	chr3L	7986549	intron	nmo +	chr3L	7987749	intron	nmo +	chr3L_23_7985001	chr3L_7985001	RAL-821_100b
2287	chr3L	8019678	8019736	chr3L	8024115	8024177	NOF	10	4430	7.5	7.0	7.2	1.2	4499	chr3L	8019678	intron	nmo +	chr3L	8021928	intron	nmo +	chr3L	8024177	intron	nmo +	chr3L_10_8020001	chr3L_8020001	RAL-821_100b
2293	chr3L	8233570	8233592	chr3L	8238855	8238878	Rt1a	18	5285	9.5	25.5	17.5	1.0	5308	chr3L	8233570	intron	CG7213 -	chr3L	8236224	intron	CG7213 -	chr3L	8238878	intron,intron	CG7213 -,Dscam4 +	chr3L_18_8235001	chr3L_8235001	RAL-821_100b
2299	chr3L	8481760	8481805	chr3L	8490934	8490969	roo	31	9167	11.5	13.5	12.5	2.3	9209	chr3L	8481760	intron	CG43163 -	chr3L	8486364	intron	CG43163 -	chr3L	8490969	intron	CG43163 -	chr3L_31_8485001	chr3L_8485001	RAL-821_100b
2301	chr3L	8498273	8498329	chr3L	8505765	8505785	blood	34	7488	10.0	13.5	11.8	2.7	7512	chr3L	8498273	intron	CG43163 -	chr3L	8502029	intron	CG43163 -	chr3L	8505785	intron	CG43163 -	chr3L_34_8500001	chr3L_8500001	RAL-821_100b
2303	chr3L	8791257	8791266	chr3L	8796697	8796711	I-element	10	5443	24.0	0.0	12.0	0.8	5454	chr3L	8791257	exon	Fhos +	chr3L	8793984	intron	Fhos +	chr3L	8796711	intron	Fhos +	chr3L_10_8790001	chr3L_8790001	RAL-821_100b
2304	chr3L	8791291	8791309	chr3L	8796686	8796753	I-element	9	5438	8.5	0.0	4.2	1.7	5462	chr3L	8791291	exon	Fhos +	chr3L	8794022	intron	Fhos +	chr3L	8796753	intron	Fhos +	chr3L_9_8790001	chr3L_8790001	RAL-821_100b
2310	chr3L	9076904	9076955	chr3L	9084489	9084540	412	43	7583	11.5	17.5	14.5	2.8	7636	chr3L	9076904	exon	Tequila +	chr3L	9080722	intron	Tequila +	chr3L	9084540	exon	Tequila +	chr3L_43_9080001	chr3L_9080001	RAL-821_100b
2311	chr3L	9130535	9130582	chr3L	9134320	9134365	412	26	3782	10.5	13.0	11.8	2.0	3830	chr3L	9130535	intergenic	bol -	chr3L	9132450	intergenic	not near genes	chr3L	9134365	intergenic	Dhpr +	chr3L_26_9130001	chr3L_9130001	RAL-821_100b
2312	chr3L	9164679	9164727	chr3L	9166166	9166188	hobo	24	1489	9.5	2.0	5.8	3.5	1509	chr3L	9164679	intron	Rdl -	chr3L	9165434	intron	Rdl -	chr3L	9166188	intron	Rdl -	chr3L_24_9165001	chr3L_9165001	RAL-821_100b
2313	chr3L	9219226	9219231	chr3L	9219923	9219928	jockey	4	697	37.5	20.0	28.8	0.1	702	chr3L	9219226	intergenic	not near genes	chr3L	9219577	intergenic	not near genes	chr3L	9219928	intergenic	not near genes	chr3L_4_9215001	chr3L_9215001	RAL-821_100b
2314	chr3L	9219232	9219268	chr3L	9219917	9219965	jockey	37	693	15.5	18.0	16.8	2.1	733	chr3L	9219232	intergenic	not near genes	chr3L	9219598	intergenic	not near genes	chr3L	9219965	intergenic	not near genes	chr3L_37_9215001	chr3L_9215001	RAL-821_100b
2317	chr3L	9270599	9270622	chr3L	9278373	9278380	roo	18	7777	15.5	11.0	13.2	1.3	7781	chr3L	9270599	intron	GluRIB +	chr3L	9274490	intron	GluRIB +	chr3L	9278380	intron	GluRIB +	chr3L_18_9270001	chr3L_9270001	RAL-821_100b
2318	chr3L	9270623	9270649	chr3L	9278371	9278397	roo	21	7767	9.5	10.0	9.8	1.9	7774	chr3L	9270623	intron	GluRIB +	chr3L	9274510	intron	GluRIB +	chr3L	9278397	exon	GluRIB +	chr3L_21_9270001	chr3L_9270001	RAL-821_100b
2325	chr3L	9392445	9392496	chr3L	9395291	9395293	Doc	9	2839	5.5	13.0	9.2	0.9	2848	chr3L	9392445	intron	CG4080 -	chr3L	9393869	intron	CG4080 -	chr3L	9395293	intron	CG4080 -	chr3L_9_9390001	chr3L_9390001	RAL-821_100b
2326	chr3L	9443490	9443511	chr3L	9445306	9445327	S-element	15	1816	17.5	2.5	10.0	1.4	1837	chr3L	9443490	intron	CG33926 +	chr3L	9444408	intron	CG33926 +	chr3L	9445327	intron	CG33926 +	chr3L_15_9440001	chr3L_9440001	RAL-821_100b
2327	chr3L	9501677	9501733	chr3L	9502188	9502229	roo	32	508	12.5	11.0	11.8	2.5	552	chr3L	9501677	intron	path -	chr3L	9501953	intron	path -	chr3L	9502229	intron	path -	chr3L_32_9500001	chr3L_9500001	RAL-821_100b
2335	chr3L	9533734	9533747	chr3L	9541319	9541332	412	7	7585	22.5	32.5	27.5	0.2	7598	chr3L	9533734	intergenic	not near genes	chr3L	9537533	intergenic	not near genes	chr3L	9541332	intergenic	not near genes	chr3L_7_9535001	chr3L_9535001	RAL-821_100b
2336	chr3L	9533748	9533781	chr3L	9541311	9541366	412	20	7578	9.0	30.5	19.8	1.0	7618	chr3L	9533748	intergenic	not near genes	chr3L	9537557	intergenic	not near genes	chr3L	9541366	intergenic	not near genes	chr3L_20_9535001	chr3L_9535001	RAL-821_100b
2337	chr3L	9571884	9571922	chr3L	9572257	9572295	jockey	31	372	10.0	10.5	10.2	2.8	411	chr3L	9571884	intron	CG42673 +	chr3L	9572090	intron	CG42673 +	chr3L	9572295	intron	CG42673 +	chr3L_31_9570001	chr3L_9570001	RAL-821_100b
2338	chr3L	9571923	9571931	chr3L	9572256	9572304	jockey	4	363	8.5	10.5	9.5	0.4	381	chr3L	9571923	intron	CG42673 +	chr3L	9572114	intron	CG42673 +	chr3L	9572304	intron	CG42673 +	chr3L_4_9570001	chr3L_9570001	RAL-821_100b
2339	chr3L	9575891	9575941	chr3L	9580985	9581026	jockey	30	5100	10.0	9.0	9.5	2.9	5135	chr3L	9575891	intron	CG42673 +	chr3L	9578458	intron	CG42673 +	chr3L	9581026	intron	CG42673 +	chr3L_30_9575001	chr3L_9575001	RAL-821_100b
2348	chr3L	9929646	9929699	chr3L	9938451	9938504	roo	30	8800	12.0	13.5	12.8	2.2	8858	chr3L	9929646	intron	CG34356 +	chr3L	9934075	intron	CG34356 +	chr3L	9938504	intron	CG34356 +	chr3L_30_9930001	chr3L_9930001	RAL-821_100b
2354	chr3L	10060090	10060117	chr3L	10067693	10067721	17.6	27	7601	21.5	9.5	15.5	1.6	7631	chr3L	10060090	intron	dpr6 +	chr3L	10063906	intron	dpr6 +	chr3L	10067721	intron	dpr6 +	chr3L_27_10060001	chr3L_10060001	RAL-821_100b
2375	chr3L	10414923	10414977	chr3L	10417319	10417334	Doc	35	2394	10.5	11.0	10.8	3.0	2411	chr3L	10414923	intergenic	CG12362 +	chr3L	10416128	intergenic	not near genes	chr3L	10417334	intergenic	not near genes	chr3L_35_10415001	chr3L_10415001	RAL-821_100b
2399	chr3L	11087037	11087058	chr3L	11088850	11088866	S-element	8	1810	22.0	8.5	15.2	0.5	1829	chr3L	11087037	intron	JIL-1 -	chr3L	11087952	intron	JIL-1 -	chr3L	11088866	intron	JIL-1 -	chr3L_8_11085001	chr3L_11085001	RAL-821_100b
2400	chr3L	11087059	11087089	chr3L	11088849	11088902	S-element	19	1806	9.5	8.5	9.0	1.9	1843	chr3L	11087059	intron	JIL-1 -	chr3L	11087980	intron	JIL-1 -	chr3L	11088902	intron	JIL-1 -	chr3L_19_11085001	chr3L_11085001	RAL-821_100b
2405	chr3L	11264450	11264496	chr3L	11271427	11271473	17.6	32	6974	18.0	16.5	17.2	1.8	7023	chr3L	11264450	intergenic	not near genes	chr3L	11267962	intergenic	not near genes	chr3L	11271473	intergenic	not near genes	chr3L_32_11265001	chr3L_11265001	RAL-821_100b
2409	chr3L	11329678	11329688	chr3L	11332898	11332913	jockey	11	3227	19.0	12.5	15.8	0.7	3235	chr3L	11329678	intergenic	not near genes	chr3L	11331296	intergenic	not near genes	chr3L	11332913	intergenic	not near genes	chr3L_11_11330001	chr3L_11330001	RAL-821_100b
2410	chr3L	11329689	11329728	chr3L	11332895	11332937	jockey	23	3224	8.0	11.0	9.5	2.2	3248	chr3L	11329689	intergenic	not near genes	chr3L	11331313	intergenic	not near genes	chr3L	11332937	intergenic	not near genes	chr3L_23_11330001	chr3L_11330001	RAL-821_100b
2420	chr3L	11564791	11564813	chr3L	11572405	11572447	412	9	7632	14.0	13.0	13.5	0.6	7656	chr3L	11564791	exon	CG33267 +	chr3L	11568619	intron	CG33267 +	chr3L	11572447	exon	CG33267 +	chr3L_9_11565001	chr3L_11565001	RAL-821_100b
2427	chr3L	11723064	11723113	chr3L	11727884	11727917	Doc	30	4819	12.0	13.5	12.8	2.2	4853	chr3L	11723064	3` UTR	Bmcp +	chr3L	11725490	intron	Bmcp +	chr3L	11727917	3` UTR	Bmcp +	chr3L_30_11725001	chr3L_11725001	RAL-821_100b
2443	chr3L	11864527	11864582	chr3L	11865847	11865902	pogo	47	1318	15.0	14.5	14.8	3.0	1375	chr3L	11864527	intron	CG44837 -	chr3L	11865214	intron	CG44837 -	chr3L	11865902	intron	CG44837 -	chr3L_47_11865001	chr3L_11865001	RAL-821_100b
2482	chr3L	12874900	12874953	chr3L	12877217	12877270	jockey	35	2316	6.5	8.5	7.5	4.1	2370	chr3L	12874900	intergenic	not near genes	chr3L	12876085	intergenic	not near genes	chr3L	12877270	intergenic	not near genes	chr3L_35_12875001	chr3L_12875001	RAL-821_100b
2484	chr3L	12919253	12919261	chr3L	12924762	12924770	Rt1c	5	5508	26.5	5.5	16.0	0.3	5517	chr3L	12919253	intergenic	not near genes	chr3L	12922012	intergenic	not near genes	chr3L	12924770	intergenic	not near genes	chr3L_5_12920001	chr3L_12920001	RAL-821_100b
2485	chr3L	12919262	12919267	chr3L	12924760	12924772	Rt1c	8	5507	26.0	4.5	15.2	0.5	5510	chr3L	12919262	intergenic	not near genes	chr3L	12922017	intergenic	not near genes	chr3L	12924772	intergenic	not near genes	chr3L_8_12920001	chr3L_12920001	RAL-821_100b
2487	chr3L	12957764	12957813	chr3L	12962271	12962320	copia	16	4507	12.0	11.5	11.8	1.2	4556	chr3L	12957764	intergenic	not near genes	chr3L	12960042	intergenic	not near genes	chr3L	12962320	intergenic	not near genes	chr3L_16_12960001	chr3L_12960001	RAL-821_100b
2511	chr3L	13525134	13525189	chr3L	13532955	13533004	roo	44	7817	12.0	18.5	15.2	2.7	7870	chr3L	13525134	intergenic	not near genes	chr3L	13529069	intergenic	not near genes	chr3L	13533004	intergenic	not near genes	chr3L_44_13525001	chr3L_13525001	RAL-821_100b
2512	chr3L	13574606	13574612	chr3L	13580136	13580148	Rt1c	5	5535	30.5	15.5	23.0	0.2	5542	chr3L	13574606	intron	bru-3 -	chr3L	13577377	intron	bru-3 -	chr3L	13580148	intron	bru-3 -	chr3L_5_13575001	chr3L_13575001	RAL-821_100b
2513	chr3L	13574613	13574616	chr3L	13580133	13580151	Rt1c	5	5530	29.0	13.5	21.2	0.2	5538	chr3L	13574613	intron	bru-3 -	chr3L	13577382	intron	bru-3 -	chr3L	13580151	intron	bru-3 -	chr3L_5_13575001	chr3L_13575001	RAL-821_100b
2514	chr3L	13574618	13574620	chr3L	13580132	13580132	Rt1c	4	5524	26.5	12.0	19.2	0.2	5514	chr3L	13574618	intron	bru-3 -	chr3L	13577375	intron	bru-3 -	chr3L	13580132	intron	bru-3 -	chr3L_4_13575001	chr3L_13575001	RAL-821_100b
2523	chr3L	13804526	13804579	chr3L	13822832	13822844	roo	26	18307	6.5	10.0	8.2	2.8	18318	chr3L	13804526	intergenic	not near genes	chr3L	13813685	intergenic	not near genes	chr3L	13822844	intergenic	not near genes	chr3L_26_13810001	chr3L_13810001	RAL-821_100b
2541	chr3L	14245557	14245594	chr3L	14245663	14245710	1360	36	116	13.5	12.5	13.0	2.6	153	chr3L	14245557	3` UTR	CR44561 -	chr3L	14245634	3` UTR	CR44561 -	chr3L	14245710	intergenic	CR44561 -,CR44560 +	chr3L_36_14245001	chr3L_14245001	RAL-821_100b
2542	chr3L	14267359	14267385	chr3L	14271812	14271850	F-element	18	4458	14.5	8.5	11.5	1.4	4491	chr3L	14267359	intergenic	not near genes	chr3L	14269604	intergenic	not near genes	chr3L	14271850	intergenic	not near genes	chr3L_18_14265001	chr3L_14265001	RAL-821_100b
2543	chr3L	14267387	14267393	chr3L	14271809	14271847	F-element	9	4452	13.0	7.5	10.2	0.8	4460	chr3L	14267387	intergenic	not near genes	chr3L	14269617	intergenic	not near genes	chr3L	14271847	intergenic	not near genes	chr3L_9_14265001	chr3L_14265001	RAL-821_100b
2544	chr3L	14267395	14267398	chr3L	14271805	14271817	F-element	7	4432	11.0	6.5	8.8	0.7	4422	chr3L	14267395	intergenic	not near genes	chr3L	14269606	intergenic	not near genes	chr3L	14271817	intergenic	not near genes	chr3L_7_14265001	chr3L_14265001	RAL-821_100b
2546	chr3L	14295956	14296010	chr3L	14296467	14296521	roo	32	509	14.0	16.5	15.2	2.0	565	chr3L	14295956	intron	fz +	chr3L	14296238	intron	fz +	chr3L	14296521	intron	fz +	chr3L_32_14295001	chr3L_14295001	RAL-821_100b
2547	chr3L	14312023	14312055	chr3L	14316835	14316884	X-element	19	4825	11.5	11.5	11.5	1.5	4861	chr3L	14312023	exon	fz +	chr3L	14314454	intron	fz +	chr3L	14316884	intron	fz +	chr3L_19_14310001	chr3L_14310001	RAL-821_100b
2549	chr3L	14468428	14468476	chr3L	14473654	14473707	copia	24	5231	6.5	13.0	9.8	2.2	5279	chr3L	14468428	intron	bbg -	chr3L	14471068	intron	bbg -	chr3L	14473707	intron	bbg -	chr3L_24_14470001	chr3L_14470001	RAL-821_100b
2562	chr3L	14721166	14721209	chr3L	14723034	14723077	Rt1c	19	1861	16.5	14.5	15.5	1.2	1911	chr3L	14721166	intron	ome +	chr3L	14722122	intron	ome +	chr3L	14723077	intron	ome +	chr3L_19_14720001	chr3L_14720001	RAL-821_100b
2563	chr3L	14725579	14725623	chr3L	14728598	14728605	Doc	15	3016	0.5	14.5	7.5	1.8	3026	chr3L	14725579	intron	ome +	chr3L	14727092	intron	ome +	chr3L	14728605	intron	ome +	chr3L_15_14725001	chr3L_14725001	RAL-821_100b
2564	chr3L	14825138	14825159	chr3L	14832890	14832911	Stalker2	10	7752	7.5	25.0	16.2	0.6	7773	chr3L	14825138	intron	CG17839 +	chr3L	14829024	intron	CG17839 +	chr3L	14832911	intron	CG17839 +	chr3L_10_14825001	chr3L_14825001	RAL-821_100b
2569	chr3L	14970759	14970762	chr3L	14971084	14971099	F-element	4	334	0.0	11.0	5.5	0.6	340	chr3L	14970759	intergenic	Tom +	chr3L	14970929	intergenic	not near genes	chr3L	14971099	intergenic	not near genes	chr3L_4_14970001	chr3L_14970001	RAL-821_100b
2570	chr3L	15085022	15085080	chr3L	15086213	15086271	1360	20	1186	11.0	9.5	10.2	1.8	1249	chr3L	15085022	intron	cp309 -	chr3L	15085646	intron	cp309 -	chr3L	15086271	intron	cp309 -	chr3L_20_15085001	chr3L_15085001	RAL-821_100b
2581	chr3L	15295747	15295798	chr3L	15298615	15298666	gypsy5	29	2867	15.0	10.5	12.8	2.1	2919	chr3L	15295747	intergenic	not near genes	chr3L	15297206	intergenic	not near genes	chr3L	15298666	intergenic	Best4 +	chr3L_29_15295001	chr3L_15295001	RAL-821_100b
2589	chr3L	15423738	15423779	chr3L	15426607	15426648	opus	25	2868	14.0	8.5	11.2	2.0	2910	chr3L	15423738	intergenic	not near genes	chr3L	15425193	intergenic	not near genes	chr3L	15426648	intergenic	not near genes	chr3L_25_15425001	chr3L_15425001	RAL-821_100b
2610	chr3L	15899213	15899259	chr3L	15899793	15899841	jockey	22	582	10.0	11.0	10.5	1.9	628	chr3L	15899213	intergenic	pHCl -	chr3L	15899527	intergenic	pHCl -	chr3L	15899841	intergenic	sff -	chr3L_22_15895001	chr3L_15895001	RAL-821_100b
2612	chr3L	15929214	15929230	chr3L	15938386	15938402	roo	8	9172	1.5	12.5	7.0	1.0	9188	chr3L	15929214	intron	Pka-C3 -	chr3L	15933808	intron	Pka-C3 -	chr3L	15938402	intron	Pka-C3 -	chr3L_8_15930001	chr3L_15930001	RAL-821_100b
2620	chr3L	16184084	16184087	chr3L	16188928	16188931	X-element	5	4844	23.5	10.5	17.0	0.3	4847	chr3L	16184084	intergenic	not near genes	chr3L	16186508	intergenic	not near genes	chr3L	16188931	intergenic	not near genes	chr3L_5_16185001	chr3L_16185001	RAL-821_100b
2621	chr3L	16184088	16184136	chr3L	16188927	16188980	X-element	32	4843	8.5	10.0	9.2	3.1	4892	chr3L	16184088	intergenic	not near genes	chr3L	16186534	intergenic	not near genes	chr3L	16188980	intergenic	not near genes	chr3L_32_16185001	chr3L_16185001	RAL-821_100b
2630	chr3L	16443807	16443877	chr3L	16446188	16446242	Doc	14	2368	1.5	12.5	7.0	1.8	2435	chr3L	16443807	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445024	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446242	intron,intron	CG33158 +,dsx-c73A -	chr3L_14_16445001	chr3L_16445001	RAL-821_100b
2634	chr3L	16493953	16494005	chr3L	16494495	16494547	jockey	34	541	14.0	12.5	13.2	2.4	594	chr3L	16493953	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494250	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494547	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_34_16490001	chr3L_16490001	RAL-821_100b
2639	chr3L	16616487	16616496	chr3L	16621840	16621849	297	8	5351	34.0	8.0	21.0	0.4	5362	chr3L	16616487	3` UTR	Abl -	chr3L	16619168	3` UTR	Abl -	chr3L	16621849	3` UTR	Abl -	chr3L_8_16615001	chr3L_16615001	RAL-821_100b
2640	chr3L	16616497	16616543	chr3L	16621839	16621894	297	36	5351	10.5	8.0	9.2	3.5	5397	chr3L	16616497	3` UTR	Abl -	chr3L	16619196	3` UTR	Abl -	chr3L	16621894	3` UTR	Abl -	chr3L_36_16615001	chr3L_16615001	RAL-821_100b
2643	chr3L	16683995	16684043	chr3L	16689241	16689279	copia	15	5245	8.0	6.5	7.2	1.8	5284	chr3L	16683995	intron,intron	Lasp -,CG43954 -	chr3L	16686637	intron,intron	Lasp -,CG43954 -	chr3L	16689279	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_15_16685001	chr3L_16685001	RAL-821_100b
2663	chr3L	16945706	16945761	chr3L	16954884	16954893	roo	40	9166	13.5	17.0	15.2	2.5	9187	chr3L	16945706	exon	Obp73a +	chr3L	16950300	intergenic	not near genes	chr3L	16954893	5` UTR	Nc73EF +	chr3L_40_16950001	chr3L_16950001	RAL-821_100b
2667	chr3L	17034910	17034967	chr3L	17035123	17035175	G2	25	211	3.0	10.0	6.5	3.3	265	chr3L	17034910	intergenic	not near genes	chr3L	17035042	intergenic	not near genes	chr3L	17035175	intergenic	beg +	chr3L_25_17035001	chr3L_17035001	RAL-821_100b
2668	chr3L	17084980	17085035	chr3L	17094154	17094209	roo	42	9174	15.5	11.5	13.5	2.9	9229	chr3L	17084980	intron	Rbp6 -	chr3L	17089594	intron	Rbp6 -	chr3L	17094209	intron	Rbp6 -	chr3L_42_17085001	chr3L_17085001	RAL-821_100b
2679	chr3L	17516958	17517005	chr3L	17524537	17524588	412	35	7581	16.0	14.0	15.0	2.2	7630	chr3L	17516958	intron	CG7564 +	chr3L	17520773	intron	CG7564 +	chr3L	17524588	3` UTR	CG7564 +	chr3L_35_17520001	chr3L_17520001	RAL-821_100b
2686	chr3L	17730830	17730880	chr3L	17738185	17738234	mdg1	30	7353	9.5	10.5	10.0	2.7	7404	chr3L	17730830	intron	Ccn +	chr3L	17734532	intron	Ccn +	chr3L	17738234	intron	Ccn +	chr3L_30_17730001	chr3L_17730001	RAL-821_100b
2688	chr3L	17799787	17799839	chr3L	17801600	17801653	S-element	34	1814	7.0	8.0	7.5	4.0	1866	chr3L	17799787	intron	NUCB1 -	chr3L	17800720	intron	NUCB1 -	chr3L	17801653	intron	NUCB1 -	chr3L_34_17800001	chr3L_17800001	RAL-821_100b
2692	chr3L	17918349	17918401	chr3L	17921177	17921229	opus	20	2824	16.0	7.5	11.8	1.6	2880	chr3L	17918349	intergenic	not near genes	chr3L	17919789	intergenic	not near genes	chr3L	17921229	intergenic	not near genes	chr3L_20_17915001	chr3L_17915001	RAL-821_100b
2697	chr3L	18047687	18047736	chr3L	18056769	18056817	roo	27	9081	9.5	7.5	8.5	2.8	9130	chr3L	18047687	intron	Eip75B -	chr3L	18052252	intron	Eip75B -	chr3L	18056817	intron	Eip75B -	chr3L_27_18050001	chr3L_18050001	RAL-821_100b
2721	chr3L	18506114	18506125	chr3L	18509602	18509613	F-element	6	3488	17.0	10.0	13.5	0.4	3499	chr3L	18506114	intergenic	not near genes	chr3L	18507864	intergenic	not near genes	chr3L	18509613	intergenic	not near genes	chr3L_6_18505001	chr3L_18505001	RAL-821_100b
2722	chr3L	18506129	18506156	chr3L	18509601	18509644	F-element	18	3486	7.5	10.0	8.8	1.8	3515	chr3L	18506129	intergenic	not near genes	chr3L	18507886	intergenic	not near genes	chr3L	18509644	intergenic	not near genes	chr3L_18_18505001	chr3L_18505001	RAL-821_100b
2723	chr3L	18528610	18528658	chr3L	18537796	18537844	roo	30	9184	14.5	9.0	11.8	2.3	9234	chr3L	18528610	intergenic	not near genes	chr3L	18533227	intergenic	not near genes	chr3L	18537844	intergenic	not near genes	chr3L_30_18530001	chr3L_18530001	RAL-821_100b
2730	chr3L	18593922	18593961	chr3L	18595927	18595931	Doc	13	1998	17.0	0.0	8.5	1.4	2009	chr3L	18593922	intergenic	term -	chr3L	18594926	intergenic	not near genes	chr3L	18595931	intergenic	CR45389 +	chr3L_13_18590001	chr3L_18590001	RAL-821_100b
2737	chr3L	18710766	18710791	chr3L	18718741	18718766	Stalker2	12	7975	8.5	6.0	7.2	1.5	8000	chr3L	18710766	intergenic	not near genes	chr3L	18714766	intergenic	not near genes	chr3L	18718766	intergenic	not near genes	chr3L_12_18710001	chr3L_18710001	RAL-821_100b
2740	chr3L	18772386	18772436	chr3L	18781092	18781142	roo	33	8704	8.0	8.5	8.2	3.6	8756	chr3L	18772386	intron	ftz-f1 -	chr3L	18776764	intron	ftz-f1 -	chr3L	18781142	intron	ftz-f1 -	chr3L_33_18775001	chr3L_18775001	RAL-821_100b
2742	chr3L	18833758	18833812	chr3L	18834947	18834962	1360	35	1184	10.0	10.5	10.2	3.1	1204	chr3L	18833758	intron	Indy -	chr3L	18834360	intron	Indy -	chr3L	18834962	intron	Indy -	chr3L_35_18830001	chr3L_18830001	RAL-821_100b
2751	chr3L	19008820	19008869	chr3L	19009176	19009232	jockey	23	358	7.5	8.5	8.0	2.6	412	chr3L	19008820	intron	nkd -	chr3L	19009026	intron	nkd -	chr3L	19009232	intron	nkd -	chr3L_23_19005001	chr3L_19005001	RAL-821_100b
2757	chr3L	19115632	19115678	chr3L	19115820	19115826	BS	23	192	8.5	10.0	9.2	2.3	194	chr3L	19115632	intron	CG14082 -	chr3L	19115729	intron	CG14082 -	chr3L	19115826	intron	CG14082 -	chr3L_23_19115001	chr3L_19115001	RAL-821_100b
2758	chr3L	19117019	19117076	chr3L	19124491	19124548	mdg1	52	7464	11.5	16.0	13.8	3.5	7529	chr3L	19117019	intron	CG14082 -	chr3L	19120784	intron	CG14082 -	chr3L	19124548	intron	CG14082 -	chr3L_52_19120001	chr3L_19120001	RAL-821_100b
2763	chr3L	19208038	19208090	chr3L	19209437	19209481	Doc	33	1394	9.0	6.5	7.8	3.7	1443	chr3L	19208038	intron	fz2 -	chr3L	19208760	intron	fz2 -	chr3L	19209481	intron	fz2 -	chr3L_33_19205001	chr3L_19205001	RAL-821_100b
2778	chr3L	19398913	19398928	chr3L	19403655	19403670	F-element	10	4740	11.5	14.0	12.8	0.7	4757	chr3L	19398913	intron	CG32206 -	chr3L	19401292	intron	CG32206 -	chr3L	19403670	intron	CG32206 -	chr3L_10_19400001	chr3L_19400001	RAL-821_100b
2789	chr3L	19820274	19820318	chr3L	19827848	19827892	412	28	7574	9.0	10.5	9.8	2.6	7618	chr3L	19820274	intron	Deaf1 +	chr3L	19824083	intron	Deaf1 +	chr3L	19827892	intron	Deaf1 +	chr3L_28_19820001	chr3L_19820001	RAL-821_100b
2790	chr3L	19848491	19848524	chr3L	19857706	19857739	roo	22	9213	10.5	18.5	14.5	1.4	9248	chr3L	19848491	intron	Papss +	chr3L	19853115	intron	Papss +	chr3L	19857739	intron	Papss +	chr3L_22_19850001	chr3L_19850001	RAL-821_100b
2791	chr3L	19848527	19848529	chr3L	19857696	19857730	roo	5	9199	9.5	16.0	12.8	0.4	9203	chr3L	19848527	intron	Papss +	chr3L	19853128	intron	Papss +	chr3L	19857730	intron	Papss +	chr3L_5_19850001	chr3L_19850001	RAL-821_100b
2792	chr3L	19861795	19861852	chr3L	19863608	19863665	S-element	29	1809	8.5	7.5	8.0	3.2	1870	chr3L	19861795	5` UTR	CR45433 +	chr3L	19862730	intergenic	not near genes	chr3L	19863665	intergenic	not near genes	chr3L_29_19860001	chr3L_19860001	RAL-821_100b
2802	chr3L	20113638	20113690	chr3L	20122920	20122972	roo	31	9281	8.5	12.0	10.2	2.8	9334	chr3L	20113638	intergenic	not near genes	chr3L	20118305	intergenic	not near genes	chr3L	20122972	intergenic	not near genes	chr3L_31_20115001	chr3L_20115001	RAL-821_100b
2808	chr3L	20212583	20212586	chr3L	20218181	20218188	mdg3	4	5601	31.0	7.5	19.2	0.2	5605	chr3L	20212583	intergenic	CG7017 -	chr3L	20215386	intergenic	not near genes	chr3L	20218188	intergenic	CG6933 -	chr3L_4_20215001	chr3L_20215001	RAL-821_100b
2809	chr3L	20257313	20257341	chr3L	20258458	20258486	pogo	21	1145	17.0	10.0	13.5	1.4	1173	chr3L	20257313	intron	rdgC +	chr3L	20257900	intron	rdgC +	chr3L	20258486	intron	rdgC +	chr3L_21_20255001	chr3L_20255001	RAL-821_100b
2810	chr3L	20257344	20257361	chr3L	20258454	20258506	pogo	19	1140	9.0	8.0	8.5	2.0	1162	chr3L	20257344	intron	rdgC +	chr3L	20257925	intron	rdgC +	chr3L	20258506	intron	rdgC +	chr3L_19_20255001	chr3L_20255001	RAL-821_100b
2812	chr3L	20321119	20321126	chr3L	20342905	20342907	17.6	4	21782	24.5	46.5	35.5	0.1	21788	chr3L	20321119	exon	Spn77Bb +	chr3L	20332013	intergenic	not near genes	chr3L	20342907	exon	Spn77Bc +	chr3L_4_20330001	chr3L_20330001	RAL-821_100b
2815	chr3L	20476733	20476780	chr3L	20484357	20484381	springer	33	7621	11.0	14.5	12.8	2.4	7648	chr3L	20476733	3` UTR	isoQC +	chr3L	20480557	intergenic	not near genes	chr3L	20484381	3` UTR	ZnT77C -	chr3L_33_20480001	chr3L_20480001	RAL-821_100b
2816	chr3L	20487645	20487674	chr3L	20488115	20488150	INE-1	24	474	21.0	11.0	16.0	1.4	505	chr3L	20487645	intron	ZnT77C -	chr3L	20487898	intron	ZnT77C -	chr3L	20488150	exon	ZnT77C -	chr3L_24_20485001	chr3L_20485001	RAL-821_100b
2823	chr3L	20590040	20590065	chr3L	20590604	20590609	412	13	561	16.5	10.0	13.2	0.9	569	chr3L	20590040	intergenic	not near genes	chr3L	20590324	intergenic	not near genes	chr3L	20590609	intergenic	not near genes	chr3L_13_20590001	chr3L_20590001	RAL-821_100b
2824	chr3L	20590068	20590097	chr3L	20590602	20590651	412	16	553	8.0	10.0	9.0	1.6	583	chr3L	20590068	intergenic	not near genes	chr3L	20590360	intergenic	not near genes	chr3L	20590651	intergenic	not near genes	chr3L_16_20590001	chr3L_20590001	RAL-821_100b
2829	chr3L	20821260	20821311	chr3L	20824896	20824932	NOF	24	3631	7.0	8.0	7.5	2.8	3672	chr3L	20821260	intron	Pka-R1 +	chr3L	20823096	intron	Pka-R1 +	chr3L	20824932	intron	Pka-R1 +	chr3L_24_20820001	chr3L_20820001	RAL-821_100b
2841	chr3L	21014894	21014948	chr3L	21023396	21023438	Tirant	40	8498	12.5	13.0	12.8	2.9	8544	chr3L	21014894	intron	skd -	chr3L	21019166	intron	skd -	chr3L	21023438	intron	skd -	chr3L_40_21015001	chr3L_21015001	RAL-821_100b
2842	chr3L	21151841	21151895	chr3L	21156950	21157004	flea	37	5108	11.5	7.5	9.5	3.5	5163	chr3L	21151841	intron	Ac78C -	chr3L	21154422	intron	Ac78C -	chr3L	21157004	intron	Ac78C -	chr3L_37_21150001	chr3L_21150001	RAL-821_100b
2849	chr3L	21243742	21243760	chr3L	21251309	21251325	412	14	7575	18.5	16.0	17.2	0.8	7583	chr3L	21243742	intron	Eip78C +	chr3L	21247534	intron	Eip78C +	chr3L	21251325	intron	Eip78C +	chr3L_14_21245001	chr3L_21245001	RAL-821_100b
2852	chr3L	21306125	21306178	chr3L	21315307	21315362	roo	33	9183	13.5	9.0	11.2	2.7	9237	chr3L	21306125	3` UTR	CG7632 +	chr3L	21310744	intron	Pc -	chr3L	21315362	3` UTR	Pc -	chr3L_33_21310001	chr3L_21310001	RAL-821_100b
2853	chr3L	21361702	21361753	chr3L	21362681	21362732	G2	17	976	7.5	9.0	8.2	1.8	1030	chr3L	21361702	intergenic	CG32440 +	chr3L	21362217	intergenic	not near genes	chr3L	21362732	intergenic	not near genes	chr3L_17_21360001	chr3L_21360001	RAL-821_100b
2856	chr3L	21372694	21372753	chr3L	21379227	21379285	McClintock	18	6532	12.5	6.0	9.2	1.8	6591	chr3L	21372694	intergenic	not near genes	chr3L	21375990	intergenic	not near genes	chr3L	21379285	intergenic	not near genes	chr3L_18_21375001	chr3L_21375001	RAL-821_100b
2867	chr3L	21498826	21498866	chr3L	21500487	21500496	1360	25	1656	14.0	16.5	15.2	1.5	1670	chr3L	21498826	5` UTR,intron	CR43933 +,Glg1 -	chr3L	21499661	intron	Glg1 -	chr3L	21500496	intron	Glg1 -	chr3L_25_21495001	chr3L_21495001	RAL-821_100b
2870	chr3L	21749306	21749313	chr3L	21754477	21754497	Doc	8	5180	25.5	9.5	17.5	0.4	5191	chr3L	21749306	intron	Syn1 -	chr3L	21751902	intron	Syn1 -	chr3L	21754497	intron	Syn1 -	chr3L_8_21750001	chr3L_21750001	RAL-821_100b
2871	chr3L	21749314	21749352	chr3L	21754473	21754490	Doc	12	5164	8.5	9.5	9.0	1.2	5176	chr3L	21749314	intron	Syn1 -	chr3L	21751902	intron	Syn1 -	chr3L	21754490	intron	Syn1 -	chr3L_12_21750001	chr3L_21750001	RAL-821_100b
2879	chr3L	21868320	21868375	chr3L	21868669	21868724	INE-1	45	347	10.5	11.5	11.0	3.8	404	chr3L	21868320	intron	mub +	chr3L	21868522	intron	mub +	chr3L	21868724	intron	mub +	chr3L_45_21865001	chr3L_21865001	RAL-821_100b
2884	chr3L	22099654	22099702	chr3L	22105865	22105913	3S18	33	6208	12.0	10.5	11.2	2.7	6259	chr3L	22099654	intergenic	not near genes	chr3L	22102784	intergenic	not near genes	chr3L	22105913	intergenic	not near genes	chr3L_33_22100001	chr3L_22100001	RAL-821_100b
2898	chr3L	22555747	22555762	chr3L	22563242	22563242	blood	8	7492	18.0	5.5	11.8	0.6	7495	chr3L	22555747	intergenic	not near genes	chr3L	22559494	intergenic	not near genes	chr3L	22563242	intergenic	not near genes	chr3L_8_22555001	chr3L_22555001	RAL-821_100b
2899	chr3L	22555770	22555801	chr3L	22563239	22563286	blood	33	7489	5.5	5.0	5.2	5.3	7516	chr3L	22555770	intergenic	not near genes	chr3L	22559528	intergenic	not near genes	chr3L	22563286	intergenic	not near genes	chr3L_33_22555001	chr3L_22555001	RAL-821_100b
2900	chr3L	22577606	22577613	chr3L	22582412	22582426	Doc	5	4810	24.0	9.0	16.5	0.3	4820	chr3L	22577606	intergenic	not near genes	chr3L	22580016	intergenic	not near genes	chr3L	22582426	3` UTR	CG14459 -	chr3L_5_22580001	chr3L_22580001	RAL-821_100b
2901	chr3L	22577614	22577624	chr3L	22582411	22582437	Doc	7	4810	20.5	9.0	14.8	0.4	4823	chr3L	22577614	intergenic	not near genes	chr3L	22580026	intergenic	not near genes	chr3L	22582437	3` UTR	CG14459 -	chr3L_7_22580001	chr3L_22580001	RAL-821_100b
2902	chr3L	22577626	22577648	chr3L	22582408	22582445	Doc	20	4807	13.5	8.5	11.0	1.7	4819	chr3L	22577626	intergenic	not near genes	chr3L	22580036	intergenic	not near genes	chr3L	22582445	3` UTR	CG14459 -	chr3L_20_22580001	chr3L_22580001	RAL-821_100b
2903	chr3L	22617167	22617222	chr3L	22624644	22624686	blood	45	7471	15.0	12.5	13.8	3.0	7519	chr3L	22617167	intron	CG14459 -	chr3L	22620926	intron	CG14459 -	chr3L	22624686	intron	CG14459 -	chr3L_45_22620001	chr3L_22620001	RAL-821_100b
2908	chr3L	22761366	22761412	chr3L	22766825	22766871	Ivk	19	5457	13.5	13.0	13.2	1.3	5505	chr3L	22761366	intron	SPoCk +	chr3L	22764118	intron	SPoCk +	chr3L	22766871	intron	SPoCk +	chr3L_19_22760001	chr3L_22760001	RAL-821_100b
2910	chr3L	22865963	22865979	chr3L	22867121	22867137	Doc	11	1158	23.0	11.0	17.0	0.6	1174	chr3L	22865963	intron	CG33170 +	chr3L	22866550	intron	CG33170 +	chr3L	22867137	intron	CG33170 +	chr3L_11_22865001	chr3L_22865001	RAL-821_100b
2911	chr3L	22865982	22866009	chr3L	22867116	22867121	Doc	13	1152	13.5	10.5	12.0	1.0	1139	chr3L	22865982	intron	CG33170 +	chr3L	22866552	intron	CG33170 +	chr3L	22867121	intron	CG33170 +	chr3L_13_22865001	chr3L_22865001	RAL-821_100b
2924	chr3L	22969001	22969030	chr3L	22969103	22969138	INE-1	14	107	10.0	8.0	9.0	1.4	137	chr3L	22969001	intergenic	not near genes	chr3L	22969070	intergenic	not near genes	chr3L	22969138	intergenic	not near genes	chr3L_14_22965001	chr3L_22965001	RAL-821_100b
2925	chr3L	22989837	22989894	chr3L	22996836	22996888	297	42	6994	8.5	11.0	9.8	3.9	7051	chr3L	22989837	intergenic	not near genes	chr3L	22993362	intergenic	not near genes	chr3L	22996888	intergenic	not near genes	chr3L_42_22990001	chr3L_22990001	RAL-821_100b
2927	chr3L	23165889	23165902	chr3L	23173357	23173371	Quasimodo	5	7469	22.0	7.5	14.8	0.3	7482	chr3L	23165889	intergenic	not near genes	chr3L	23169630	intergenic	not near genes	chr3L	23173371	intergenic	not near genes	chr3L_5_23165001	chr3L_23165001	RAL-821_100b
2934	chr3L	23665509	23665529	chr3L	23665624	23665644	gypsy8	17	113	60.0	72.0	66.0	0.3	135	chr3L	23665509	intron	AGO3 +	chr3L	23665576	intron	AGO3 +	chr3L	23665644	intron	AGO3 +	chr3L_17_23665001	chr3L_23665001	RAL-821_100b
2935	chr3L	23535634	23535677	chr3L	23678967	23678990	Bica	4	143319	36.5	56.5	46.5	0.1	143356	chr3L	23535634	intergenic	not near genes	chr3L	23607312	intron	AGO3 +	chr3L	23678990	intron	AGO3 +	chr3L_4_23605001	chr3L_23605001	RAL-821_100b
2938	chr3L	23848817	23848838	chr3L	23849666	23849687	R1A1-element	12	848	20.0	11.5	15.8	0.7	870	chr3L	23848817	intron	CG40470 -	chr3L	23849252	intron	CG40470 -	chr3L	23849687	intron	CG40470 -	chr3L_12_23845001	chr3L_23845001	RAL-821_100b
2941	chr3L	24012390	24012433	chr3L	24020756	24020799	roo	25	8365	6.5	11.5	9.0	2.5	8409	chr3L	24012390	intergenic	not near genes	chr3L	24016594	intergenic	not near genes	chr3L	24020799	intergenic	not near genes	chr3L_25_24015001	chr3L_24015001	RAL-821_100b
2942	chr3L	24021252	24021314	chr3L	24022434	24022491	1360	27	1177	5.0	6.5	5.8	4.0	1239	chr3L	24021252	intergenic	not near genes	chr3L	24021872	intergenic	not near genes	chr3L	24022491	intergenic	not near genes	chr3L_27_24020001	chr3L_24020001	RAL-821_100b
2944	chr3L	24168765	24168822	chr3L	24176117	24176175	ZAM	51	7345	11.0	9.5	10.2	4.6	7410	chr3L	24168765	intron	Snap25 +	chr3L	24172470	intron	Snap25 +	chr3L	24176175	intron	Snap25 +	chr3L_51_24170001	chr3L_24170001	RAL-821_100b
2949	chr3L	24791852	24791912	chr3L	24796674	24796716	Doc	8	4820	2.0	7.5	4.8	1.4	4864	chr3L	24791852	intergenic	not near genes	chr3L	24794284	intergenic	not near genes	chr3L	24796716	intergenic	not near genes	chr3L_8_24790001	chr3L_24790001	RAL-821_100b
2955	chr3L	24393757	24393770	chr3L	25208136	25208149	gypsy3	4	814379	15.5	62.5	39.0	0.1	814392	chr3L	24393757	intron	nvd +	chr3L	24800953	intergenic	not near genes	chr3L	25208149	intergenic	not near genes	chr3L_4_24800001	chr3L_24800001	RAL-821_100b
2962	chr3L	25628499	25628525	chr3L	25633271	25633321	F-element	17	4790	13.0	8.0	10.5	1.5	4822	chr3L	25628499	intron	CG41343 -	chr3L	25630910	intron	CG41343 -	chr3L	25633321	intron	CG41343 -	chr3L_17_25630001	chr3L_25630001	RAL-821_100b
2976	chr3L	27356091	27356108	chr3L	27357315	27357332	1360	11	1224	14.0	10.0	12.0	0.8	1241	chr3L	27356091	intron	Dbp80 +	chr3L	27356712	intron	Dbp80 +	chr3L	27357332	intron	Dbp80 +	chr3L_11_27355001	chr3L_27355001	RAL-821_100b
2980	chr3L	27727617	27727624	chr3L	27728749	27728756	G-element	4	1132	20.5	21.5	21.0	0.2	1139	chr3L	27727617	intergenic	not near genes	chr3L	27728186	intergenic	not near genes	chr3L	27728756	intergenic	not near genes	chr3L_4_27725001	chr3L_27725001	RAL-821_100b
2981	chr3L	27727635	27727661	chr3L	27728745	27728790	G-element	9	1116	13.0	21.0	17.0	0.5	1155	chr3L	27727635	intergenic	not near genes	chr3L	27728212	intergenic	not near genes	chr3L	27728790	intergenic	not near genes	chr3L_9_27725001	chr3L_27725001	RAL-821_100b
2983	chr3L	27980673	27980731	chr3L	27985496	27985554	Doc	15	4819	4.0	8.0	6.0	2.1	4881	chr3L	27980673	intron	CG17514 -	chr3L	27983114	intron	CG17514 -	chr3L	27985554	intron	CG17514 -	chr3L_15_27980001	chr3L_27980001	RAL-821_100b
2984	chr3R	97106	97107	chr3R	98956	98957	1360	4	1850	32.5	0.0	16.2	0.2	1851	chr3R	97106	intergenic	not near genes	chr3R	98032	intergenic	not near genes	chr3R	98957	intergenic	not near genes	chr3R_4_95001	chr3R_95001	RAL-821_100b
2987	chr3R	1252414	1252419	chr3R	1266230	1266237	297	7	13798	44.5	36.5	40.5	0.2	13823	chr3R	1252414	intergenic	not near genes	chr3R	1259326	intergenic	not near genes	chr3R	1266237	intergenic	not near genes	chr3R_7_1255001	chr3R_1255001	RAL-821_100b
2988	chr3R	1268510	1268565	chr3R	1291946	1292001	17.6	10	23436	58.0	43.0	50.5	0.2	23491	chr3R	1268510	intergenic	not near genes	chr3R	1280256	intergenic	not near genes	chr3R	1292001	intergenic	not near genes	chr3R_10_1280001	chr3R_1280001	RAL-821_100b
2996	chr3R	1850865	1850906	chr3R	1853516	1853551	INE-1	16	2648	1.5	9.0	5.2	2.6	2686	chr3R	1850865	intron	CG42623 +	chr3R	1852208	intron	CG42623 +	chr3R	1853551	intron	CG42623 +	chr3R_16_1850001	chr3R_1850001	RAL-821_100b
3001	chr3R	1446700	1446701	chr3R	2999354	2999355	invader2	4	1552654	27.0	36.5	31.8	0.1	1552655	chr3R	1446700	intron	CG40155 +	chr3R	2223028	intergenic	not near genes	chr3R	2999355	intron	CG42618 -	chr3R_4_2220001	chr3R_2220001	RAL-821_100b
3005	chr3R	3623639	3623652	chr3R	3623857	3623864	1360	9	217	110.5	101.5	106.0	0.1	225	chr3R	3623639	exon	Alg-2 +	chr3R	3623752	intron	Alg-2 +	chr3R	3623864	intron	Alg-2 +	chr3R_9_3620001	chr3R_3620001	RAL-821_100b
3009	chr3R	4105020	4105069	chr3R	4110249	4110255	copia	16	5224	6.0	14.0	10.0	1.5	5235	chr3R	4105020	intergenic	not near genes	chr3R	4107638	intergenic	not near genes	chr3R	4110255	intergenic	not near genes	chr3R_16_4105001	chr3R_4105001	RAL-821_100b
3010	chr3R	4206045	4206104	chr3R	4211645	4211687	mdg3	36	5597	7.5	8.5	8.0	4.0	5642	chr3R	4206045	intron	CG14636 -	chr3R	4208866	intron	CG14636 -	chr3R	4211687	intron	CG14636 -	chr3R_36_4205001	chr3R_4205001	RAL-821_100b
3013	chr3R	4366737	4366788	chr3R	4375145	4375195	roo	29	8407	5.5	9.5	7.5	3.4	8458	chr3R	4366737	3` UTR	CG1090 +	chr3R	4370966	intergenic	not near genes	chr3R	4375195	5` UTR	CR44922 +	chr3R_29_4370001	chr3R_4370001	RAL-821_100b
3014	chr3R	4408390	4408410	chr3R	4412719	4412739	Juan	16	4328	23.0	13.5	18.2	0.8	4349	chr3R	4408390	intron	CG32944 -	chr3R	4410564	intron	CG32944 -	chr3R	4412739	intron	CG32944 -	chr3R_16_4410001	chr3R_4410001	RAL-821_100b
3015	chr3R	4408413	4408442	chr3R	4412717	4412736	Juan	19	4323	15.0	12.5	13.8	1.3	4323	chr3R	4408413	intron	CG32944 -	chr3R	4410574	intron	CG32944 -	chr3R	4412736	intron	CG32944 -	chr3R_19_4410001	chr3R_4410001	RAL-821_100b
3024	chr3R	4887456	4887464	chr3R	4894858	4894866	rover	4	7402	20.0	13.0	16.5	0.2	7410	chr3R	4887456	intergenic	not near genes	chr3R	4891161	intergenic	not near genes	chr3R	4894866	intergenic	not near genes	chr3R_4_4890001	chr3R_4890001	RAL-821_100b
3025	chr3R	4887465	4887512	chr3R	4894856	4894913	rover	29	7397	7.5	13.0	10.2	2.6	7448	chr3R	4887465	intergenic	not near genes	chr3R	4891189	intergenic	not near genes	chr3R	4894913	intergenic	not near genes	chr3R_29_4890001	chr3R_4890001	RAL-821_100b
3036	chr3R	5045821	5045875	chr3R	5052948	5053002	HMS-Beagle	30	7125	11.5	8.5	10.0	2.7	7181	chr3R	5045821	3` UTR	CR43635 -	chr3R	5049412	intergenic	not near genes	chr3R	5053002	intergenic	CR45588 -	chr3R_30_5045001	chr3R_5045001	RAL-821_100b
3037	chr3R	5067956	5067996	chr3R	5073498	5073538	mdg3	31	5541	18.5	12.0	15.2	1.9	5582	chr3R	5067956	intergenic	not near genes	chr3R	5070747	intergenic	not near genes	chr3R	5073538	intergenic	not near genes	chr3R_31_5070001	chr3R_5070001	RAL-821_100b
3038	chr3R	5067997	5068012	chr3R	5073497	5073544	mdg3	13	5535	12.5	12.0	12.2	1.0	5547	chr3R	5067997	intergenic	not near genes	chr3R	5070770	intergenic	not near genes	chr3R	5073544	intergenic	not near genes	chr3R_13_5070001	chr3R_5070001	RAL-821_100b
3047	chr3R	5338376	5338430	chr3R	5343578	5343590	Rt1c	44	5198	13.5	24.5	19.0	2.2	5214	chr3R	5338376	intron	mtd -	chr3R	5340983	intron	mtd -	chr3R	5343590	intron	mtd -	chr3R_44_5340001	chr3R_5340001	RAL-821_100b
3051	chr3R	5445935	5445994	chr3R	5452420	5452479	Burdock	40	6483	7.5	9.5	8.5	4.2	6544	chr3R	5445935	intron	CG14669 +	chr3R	5449207	intron	CG14669 +	chr3R	5452479	intron	CG14669 +	chr3R_40_5445001	chr3R_5445001	RAL-821_100b
3057	chr3R	5745988	5746042	chr3R	5746254	5746308	pogo	37	264	10.0	11.5	10.8	3.1	320	chr3R	5745988	3` UTR	Madm +	chr3R	5746148	3` UTR	Madm +	chr3R	5746308	3` UTR	Madm +	chr3R_37_5745001	chr3R_5745001	RAL-821_100b
3058	chr3R	5746990	5747042	chr3R	5753206	5753258	diver	32	6213	9.0	4.5	6.8	4.1	6268	chr3R	5746990	intergenic	Madm +	chr3R	5750124	intergenic	not near genes	chr3R	5753258	intergenic	CG2091 -	chr3R_32_5750001	chr3R_5750001	RAL-821_100b
3061	chr3R	5809089	5809139	chr3R	5809355	5809405	pogo	34	263	13.0	11.0	12.0	2.6	316	chr3R	5809089	3` UTR	CG11000 +	chr3R	5809247	3` UTR	CG11000 +	chr3R	5809405	3` UTR	CG11000 +	chr3R_34_5805001	chr3R_5805001	RAL-821_100b
3062	chr3R	5822357	5822406	chr3R	5823549	5823598	1360	44	1190	14.5	12.0	13.2	3.1	1241	chr3R	5822357	3` UTR	CG2023 -	chr3R	5822978	3` UTR	CG2023 -	chr3R	5823598	3` UTR	CG2023 -	chr3R_44_5820001	chr3R_5820001	RAL-821_100b
3065	chr3R	5927559	5927586	chr3R	5927799	5927801	pogo	26	251	15.0	9.5	12.2	2.0	242	chr3R	5927559	intron	CG34113 -	chr3R	5927680	intron	CG34113 -	chr3R	5927801	intron	CG34113 -	chr3R_26_5925001	chr3R_5925001	RAL-821_100b
3069	chr3R	6015948	6015995	chr3R	6024448	6024500	Tirant	36	8502	10.5	18.0	14.2	2.4	8552	chr3R	6015948	intergenic	not near genes	chr3R	6020224	intergenic	not near genes	chr3R	6024500	intergenic	not near genes	chr3R_36_6020001	chr3R_6020001	RAL-821_100b
3072	chr3R	6158506	6158540	chr3R	6167093	6167103	Tirant	17	8597	12.5	6.5	9.5	1.6	8597	chr3R	6158506	intergenic	not near genes	chr3R	6162804	intergenic	not near genes	chr3R	6167103	intergenic	CG1077 +	chr3R_17_6160001	chr3R_6160001	RAL-821_100b
3073	chr3R	6175147	6175204	chr3R	6182444	6182466	HMS-Beagle2	38	7289	11.0	11.0	11.0	3.2	7319	chr3R	6175147	intergenic	Osi1 +	chr3R	6178806	intron	CR45194 +	chr3R	6182466	intergenic	CR45194 +	chr3R_38_6175001	chr3R_6175001	RAL-821_100b
3076	chr3R	6206268	6206320	chr3R	6206505	6206528	BS	41	239	14.5	17.0	15.8	2.4	260	chr3R	6206268	exon	Osi24 +	chr3R	6206398	intron	Osi24 +	chr3R	6206528	intron	Osi24 +	chr3R_41_6205001	chr3R_6205001	RAL-821_100b
3082	chr3R	6510002	6510046	chr3R	6515108	6515152	jockey	26	5104	10.5	7.5	9.0	2.6	5150	chr3R	6510002	intergenic	not near genes	chr3R	6512577	intergenic	not near genes	chr3R	6515152	intergenic	not near genes	chr3R_26_6510001	chr3R_6510001	RAL-821_100b
3085	chr3R	6737478	6737526	chr3R	6739290	6739310	Doc	19	1807	12.5	13.0	12.8	1.4	1832	chr3R	6737478	intron	pb -	chr3R	6738394	intron	pb -	chr3R	6739310	intron	pb -	chr3R_19_6735001	chr3R_6735001	RAL-821_100b
3100	chr3R	7349643	7349686	chr3R	7355467	7355536	micropia	19	5835	0.0	1.5	0.8	10.6	5893	chr3R	7349643	intergenic	CG43290 -	chr3R	7352590	intergenic	not near genes	chr3R	7355536	intergenic	not near genes	chr3R_19_7350001	chr3R_7350001	RAL-821_100b
3115	chr3R	7694555	7694609	chr3R	7713641	7713695	invader3	26	19083	7.5	11.0	9.2	2.5	19140	chr3R	7694555	3` UTR	Nlg1 +	chr3R	7704125	intergenic	not near genes	chr3R	7713695	intergenic	not near genes	chr3R_26_7700001	chr3R_7700001	RAL-821_100b
3117	chr3R	7729442	7729457	chr3R	7737405	7737420	Stalker2	15	7963	25.0	13.5	19.2	0.7	7978	chr3R	7729442	intergenic	not near genes	chr3R	7733431	intergenic	not near genes	chr3R	7737420	intergenic	not near genes	chr3R_15_7730001	chr3R_7730001	RAL-821_100b
3118	chr3R	7729459	7729497	chr3R	7737402	7737454	Stalker2	21	7961	9.5	13.0	11.2	1.7	7995	chr3R	7729459	intergenic	not near genes	chr3R	7733456	intergenic	not near genes	chr3R	7737454	intergenic	not near genes	chr3R_21_7730001	chr3R_7730001	RAL-821_100b
3122	chr3R	7849615	7849677	chr3R	7850807	7850844	1360	31	1185	4.0	8.0	6.0	4.4	1229	chr3R	7849615	intron	CG34384 +	chr3R	7850230	intron	CG34384 +	chr3R	7850844	intron	CG34384 +	chr3R_31_7850001	chr3R_7850001	RAL-821_100b
3125	chr3R	7973296	7973341	chr3R	7974383	7974428	1360	27	1085	9.5	6.5	8.0	3.0	1132	chr3R	7973296	intergenic	not near genes	chr3R	7973862	intergenic	not near genes	chr3R	7974428	3` UTR	CD98hc -	chr3R_27_7970001	chr3R_7970001	RAL-821_100b
3128	chr3R	8090541	8090553	chr3R	8094043	8094055	297	4	3501	18.0	25.0	21.5	0.2	3514	chr3R	8090541	intergenic	CR44330 +	chr3R	8092298	intergenic	not near genes	chr3R	8094055	intergenic	CG7900 +	chr3R_4_8090001	chr3R_8090001	RAL-821_100b
3129	chr3R	8090555	8090571	chr3R	8094042	8094065	297	12	3497	9.5	24.5	17.0	0.7	3510	chr3R	8090555	intergenic	CR44330 +	chr3R	8092310	intergenic	not near genes	chr3R	8094065	intergenic	CG7900 +	chr3R_12_8090001	chr3R_8090001	RAL-821_100b
3130	chr3R	8094388	8094432	chr3R	8099718	8099762	Transpac	28	5329	13.5	12.5	13.0	2.0	5374	chr3R	8094388	intron	CG7900 +	chr3R	8097075	intron	CG7900 +	chr3R	8099762	intron	CG7900 +	chr3R_28_8095001	chr3R_8095001	RAL-821_100b
3131	chr3R	8101742	8101789	chr3R	8104848	8104893	G2	41	3105	7.5	6.5	7.0	5.1	3151	chr3R	8101742	exon	CG7900 +	chr3R	8103318	intron	CG7900 +	chr3R	8104893	3` UTR	CG7900 +	chr3R_41_8100001	chr3R_8100001	RAL-821_100b
3134	chr3R	8207548	8207585	chr3R	8208398	8208434	F-element	25	858	7.5	9.0	8.2	2.7	886	chr3R	8207548	intergenic	not near genes	chr3R	8207991	intergenic	not near genes	chr3R	8208434	intergenic	not near genes	chr3R_25_8205001	chr3R_8205001	RAL-821_100b
3138	chr3R	8402988	8403019	chr3R	8412179	8412205	roo	21	9189	21.0	23.5	22.2	0.9	9217	chr3R	8402988	intron	CG45263 -	chr3R	8407596	intron	CG45263 -	chr3R	8412205	intron	CG45263 -	chr3R_21_8405001	chr3R_8405001	RAL-821_100b
3139	chr3R	8403022	8403039	chr3R	8412173	8412195	roo	13	9175	10.5	20.5	15.5	0.8	9173	chr3R	8403022	intron	CG45263 -	chr3R	8407608	intron	CG45263 -	chr3R	8412195	intron	CG45263 -	chr3R_13_8405001	chr3R_8405001	RAL-821_100b
3144	chr3R	8570461	8570481	chr3R	8575116	8575132	HMS-Beagle	21	4657	19.5	9.5	14.5	1.4	4671	chr3R	8570461	intergenic	not near genes	chr3R	8572796	intergenic	not near genes	chr3R	8575132	intergenic	not near genes	chr3R_21_8570001	chr3R_8570001	RAL-821_100b
3145	chr3R	8570483	8570510	chr3R	8575114	8575170	HMS-Beagle	19	4652	9.0	8.5	8.8	1.9	4687	chr3R	8570483	intergenic	not near genes	chr3R	8572826	intergenic	not near genes	chr3R	8575170	intergenic	not near genes	chr3R_19_8570001	chr3R_8570001	RAL-821_100b
3146	chr3R	8601749	8601777	chr3R	8610927	8610955	roo	15	9177	24.5	12.5	18.5	0.8	9206	chr3R	8601749	intron	5-HT2B +	chr3R	8606352	intron	5-HT2B +	chr3R	8610955	intron	5-HT2B +	chr3R_15_8605001	chr3R_8605001	RAL-821_100b
3147	chr3R	8601780	8601797	chr3R	8610920	8610975	roo	12	9165	15.5	9.0	12.2	0.9	9195	chr3R	8601780	intron	5-HT2B +	chr3R	8606378	intron	5-HT2B +	chr3R	8610975	intron	5-HT2B +	chr3R_12_8605001	chr3R_8605001	RAL-821_100b
3149	chr3R	8707329	8707382	chr3R	8709796	8709848	jockey	23	2463	14.0	16.0	15.0	1.4	2519	chr3R	8707329	intergenic	not near genes	chr3R	8708588	intergenic	not near genes	chr3R	8709848	intergenic	not near genes	chr3R_23_8705001	chr3R_8705001	RAL-821_100b
3154	chr3R	8898184	8898213	chr3R	8913803	8913832	297	16	15616	8.5	18.0	13.2	1.1	15648	chr3R	8898184	intron	pyd -	chr3R	8906008	intron	pyd -	chr3R	8913832	intron	pyd -	chr3R_16_8905001	chr3R_8905001	RAL-821_100b
3166	chr3R	9278762	9278783	chr3R	9284047	9284068	Rt1a	15	5284	14.5	11.0	12.8	1.1	5306	chr3R	9278762	intergenic	not near genes	chr3R	9281415	intergenic	not near genes	chr3R	9284068	intergenic	not near genes	chr3R_15_9280001	chr3R_9280001	RAL-821_100b
3167	chr3R	9278784	9278806	chr3R	9284043	9284080	Rt1a	20	5281	9.0	11.0	10.0	1.8	5296	chr3R	9278784	intergenic	not near genes	chr3R	9281432	intergenic	not near genes	chr3R	9284080	intergenic	not near genes	chr3R_20_9280001	chr3R_9280001	RAL-821_100b
3168	chr3R	9304509	9304526	chr3R	9311821	9311828	Stalker4	6	7310	42.5	12.5	27.5	0.2	7319	chr3R	9304509	intron	CG8861 -	chr3R	9308168	intron	CG8861 -	chr3R	9311828	intron	CG8861 -	chr3R_6_9305001	chr3R_9305001	RAL-821_100b
3169	chr3R	9319550	9319605	chr3R	9320010	9320030	jockey	34	458	14.5	18.0	16.2	2.0	480	chr3R	9319550	intron	CG8861 -	chr3R	9319790	intron	CG8861 -	chr3R	9320030	intron	CG8861 -	chr3R_34_9315001	chr3R_9315001	RAL-821_100b
3171	chr3R	9361804	9361846	chr3R	9362061	9362112	pogo	22	264	6.5	6.0	6.2	3.1	308	chr3R	9361804	3` UTR	CG45050 +	chr3R	9361958	3` UTR	CG45050 +	chr3R	9362112	3` UTR	CG45050 +	chr3R_22_9360001	chr3R_9360001	RAL-821_100b
3193	chr3R	10196923	10196927	chr3R	10202937	10202941	297	4	6013	45.5	15.5	30.5	0.1	6018	chr3R	10196923	intron	Syn +	chr3R	10199932	intron	Syn +	chr3R	10202941	intron	Syn +	chr3R_4_10195001	chr3R_10195001	RAL-821_100b
3194	chr3R	10231758	10231811	chr3R	10237360	10237408	mdg3	31	5600	7.5	8.5	8.0	3.4	5650	chr3R	10231758	intron	CG42795 +	chr3R	10234583	intron	CG42795 +	chr3R	10237408	intron	CG42795 +	chr3R_31_10230001	chr3R_10230001	RAL-821_100b
3195	chr3R	10255359	10255363	chr3R	10260824	10260828	I-element	5	5465	22.0	16.5	19.2	0.2	5469	chr3R	10255359	3` UTR	Sirt6 -	chr3R	10258094	intron	Sirt6 -	chr3R	10260828	exon	Sirt6 -	chr3R_5_10255001	chr3R_10255001	RAL-821_100b
3196	chr3R	10255364	10255381	chr3R	10260823	10260831	I-element	12	5462	15.5	16.0	15.8	0.7	5467	chr3R	10255364	3` UTR	Sirt6 -	chr3R	10258098	intron	Sirt6 -	chr3R	10260831	exon	Sirt6 -	chr3R_12_10255001	chr3R_10255001	RAL-821_100b
3217	chr3R	10804149	10804203	chr3R	10811706	10811760	17.6	31	7556	7.0	11.0	9.0	3.1	7611	chr3R	10804149	intergenic	CG14692 -	chr3R	10807954	intergenic	not near genes	chr3R	10811760	3` UTR	CG14693 -	chr3R_31_10805001	chr3R_10805001	RAL-821_100b
3224	chr3R	10957848	10957885	chr3R	10963253	10963299	Rt1c	16	5406	17.5	11.5	14.5	1.0	5451	chr3R	10957848	intergenic	not near genes	chr3R	10960574	intergenic	not near genes	chr3R	10963299	intergenic	not near genes	chr3R_16_10960001	chr3R_10960001	RAL-821_100b
3230	chr3R	11065568	11065616	chr3R	11071243	11071293	297	5	5676	3.0	5.0	4.0	1.0	5725	chr3R	11065568	intergenic	not near genes	chr3R	11068430	intergenic	not near genes	chr3R	11071293	intergenic	not near genes	chr3R_5_11065001	chr3R_11065001	RAL-821_100b
3241	chr3R	11379213	11379266	chr3R	11388393	11388421	roo	36	9176	5.5	13.5	9.5	3.4	9208	chr3R	11379213	intron	pros +	chr3R	11383817	intron	pros +	chr3R	11388421	intron	pros +	chr3R_36_11380001	chr3R_11380001	RAL-821_100b
3254	chr3R	11841052	11841093	chr3R	11846254	11846277	BS	30	5211	13.0	11.0	12.0	2.3	5225	chr3R	11841052	intron	CG6959 -	chr3R	11843664	intron	CG6959 -	chr3R	11846277	intron	CG6959 -	chr3R_30_11840001	chr3R_11840001	RAL-821_100b
3261	chr3R	12022862	12022891	chr3R	12025064	12025093	pogo	20	2201	16.5	13.5	15.0	1.2	2231	chr3R	12022862	intergenic	not near genes	chr3R	12023978	intergenic	not near genes	chr3R	12025093	intergenic	not near genes	chr3R_20_12020001	chr3R_12020001	RAL-821_100b
3262	chr3R	12022895	12022916	chr3R	12025063	12025111	pogo	13	2196	6.5	13.0	9.8	1.2	2216	chr3R	12022895	intergenic	not near genes	chr3R	12024003	intergenic	not near genes	chr3R	12025111	intergenic	not near genes	chr3R_13_12020001	chr3R_12020001	RAL-821_100b
3290	chr3R	12864552	12864591	chr3R	12865055	12865101	roo	11	509	3.5	7.5	5.5	1.7	549	chr3R	12864552	intergenic	not near genes	chr3R	12864826	intergenic	not near genes	chr3R	12865101	intergenic	not near genes	chr3R_11_12860001	chr3R_12860001	RAL-821_100b
3293	chr3R	12920138	12920180	chr3R	12925356	12925408	copia	22	5226	7.5	13.5	10.5	1.9	5270	chr3R	12920138	intron	beat-Vb +	chr3R	12922773	intron	beat-Vb +	chr3R	12925408	intron	beat-Vb +	chr3R_22_12920001	chr3R_12920001	RAL-821_100b
3298	chr3R	13135811	13135852	chr3R	13138001	13138042	pogo	21	2189	8.5	9.5	9.0	2.1	2231	chr3R	13135811	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136926	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138042	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_21_13135001	chr3R_13135001	RAL-821_100b
3299	chr3R	13143014	13143066	chr3R	13148615	13148667	mdg3	49	5592	5.0	14.0	9.5	4.7	5653	chr3R	13143014	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145840	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148667	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_49_13145001	chr3R_13145001	RAL-821_100b
3300	chr3R	13314072	13314135	chr3R	13318884	13318892	Doc	23	4808	5.5	5.5	5.5	3.5	4820	chr3R	13314072	intergenic	not near genes	chr3R	13316482	intergenic	not near genes	chr3R	13318892	intergenic	CG45080 -	chr3R_23_13315001	chr3R_13315001	RAL-821_100b
3306	chr3R	13517204	13517256	chr3R	13520046	13520096	jockey	16	2842	6.5	0.0	3.2	3.8	2892	chr3R	13517204	intergenic	not near genes	chr3R	13518650	intergenic	not near genes	chr3R	13520096	intergenic	not near genes	chr3R_16_13515001	chr3R_13515001	RAL-821_100b
3332	chr3R	14021623	14021680	chr3R	14023465	14023522	S-element	36	1838	7.5	7.5	7.5	4.2	1899	chr3R	14021623	intron	rdx -	chr3R	14022572	intron	rdx -	chr3R	14023522	intron	rdx -	chr3R_36_14020001	chr3R_14020001	RAL-821_100b
3342	chr3R	14180786	14180824	chr3R	14185576	14185601	F-element	15	4789	14.0	9.0	11.5	1.2	4815	chr3R	14180786	intron	Dop1R1 -	chr3R	14183194	intron	Dop1R1 -	chr3R	14185601	intron	Dop1R1 -	chr3R_15_14180001	chr3R_14180001	RAL-821_100b
3343	chr3R	14194412	14194459	chr3R	14203580	14203623	roo	25	9173	18.0	8.5	13.2	1.8	9211	chr3R	14194412	intron	Dop1R1 -	chr3R	14199018	intron	Dop1R1 -	chr3R	14203623	intron	Dop1R1 -	chr3R_25_14195001	chr3R_14195001	RAL-821_100b
3344	chr3R	14246370	14246384	chr3R	14247891	14247905	jockey	9	1520	20.5	11.5	16.0	0.5	1535	chr3R	14246370	intergenic	not near genes	chr3R	14247138	intergenic	not near genes	chr3R	14247905	intergenic	not near genes	chr3R_9_14245001	chr3R_14245001	RAL-821_100b
3345	chr3R	14246391	14246418	chr3R	14247887	14247939	jockey	30	1508	9.0	9.5	9.2	2.9	1548	chr3R	14246391	intergenic	not near genes	chr3R	14247165	intergenic	not near genes	chr3R	14247939	intergenic	not near genes	chr3R_30_14245001	chr3R_14245001	RAL-821_100b
3371	chr3R	15041403	15041454	chr3R	15045196	15045247	Doc	31	3791	6.0	6.5	6.2	4.3	3844	chr3R	15041403	intergenic	not near genes	chr3R	15043325	intergenic	not near genes	chr3R	15045247	intergenic	not near genes	chr3R_31_15040001	chr3R_15040001	RAL-821_100b
3372	chr3R	15059255	15059259	chr3R	15059474	15059478	BS	4	219	9.0	0.0	4.5	0.7	223	chr3R	15059255	intron	dpr9 -	chr3R	15059366	intron	dpr9 -	chr3R	15059478	intron	dpr9 -	chr3R_4_15055001	chr3R_15055001	RAL-821_100b
3373	chr3R	15059262	15059481	chr3R	15059471	15059593	BS	23	159	0.0	0.0	0.0	23.0	331	chr3R	15059262	intron	dpr9 -	chr3R	15059428	intron	dpr9 -	chr3R	15059593	intron	dpr9 -	chr3R_23_15055001	chr3R_15055001	RAL-821_100b
3375	chr3R	15079781	15079838	chr3R	15080047	15080104	pogo	30	266	7.0	7.0	7.0	3.8	323	chr3R	15079781	3` UTR	CG6966 -	chr3R	15079942	3` UTR	CG6966 -	chr3R	15080104	3` UTR	CG6966 -	chr3R_30_15075001	chr3R_15075001	RAL-821_100b
3377	chr3R	15102476	15102490	chr3R	15109757	15109770	412	10	7279	18.5	14.0	16.2	0.6	7294	chr3R	15102476	intron	CG42788 -	chr3R	15106123	intron	CG42788 -	chr3R	15109770	intron	CG42788 -	chr3R_10_15105001	chr3R_15105001	RAL-821_100b
3378	chr3R	15102491	15102531	chr3R	15109756	15109775	412	30	7275	4.5	13.5	9.0	3.0	7284	chr3R	15102491	intron	CG42788 -	chr3R	15106133	intron	CG42788 -	chr3R	15109775	intron	CG42788 -	chr3R_30_15105001	chr3R_15105001	RAL-821_100b
3381	chr3R	15132042	15132076	chr3R	15135127	15135161	Juan	23	3084	21.5	20.0	20.8	1.1	3119	chr3R	15132042	intergenic	CG42788 -	chr3R	15133602	intergenic	not near genes	chr3R	15135161	3` UTR	CG6912 -	chr3R_23_15130001	chr3R_15130001	RAL-821_100b
3382	chr3R	15162522	15162547	chr3R	15167315	15167319	F-element	20	4791	15.0	6.0	10.5	1.7	4797	chr3R	15162522	intron	Gyc88E +	chr3R	15164920	intron	Gyc88E +	chr3R	15167319	intron	Gyc88E +	chr3R_20_15160001	chr3R_15160001	RAL-821_100b
3401	chr3R	15601145	15601176	chr3R	15608692	15608723	412	21	7545	14.5	14.5	14.5	1.4	7578	chr3R	15601145	intergenic	not near genes	chr3R	15604934	intergenic	not near genes	chr3R	15608723	intergenic	not near genes	chr3R_21_15600001	chr3R_15600001	RAL-821_100b
3402	chr3R	15601179	15601195	chr3R	15608685	15608742	412	11	7542	7.5	11.5	9.5	1.0	7563	chr3R	15601179	intergenic	not near genes	chr3R	15604960	intergenic	not near genes	chr3R	15608742	intergenic	not near genes	chr3R_11_15600001	chr3R_15600001	RAL-821_100b
3403	chr3R	15618722	15618764	chr3R	15626221	15626263	blood	9	7497	3.0	13.5	8.2	1.0	7541	chr3R	15618722	intergenic	not near genes	chr3R	15622492	intergenic	not near genes	chr3R	15626263	intergenic	not near genes	chr3R_9_15620001	chr3R_15620001	RAL-821_100b
3407	chr3R	15735218	15735237	chr3R	15739963	15739982	F-element	10	4743	5.0	8.0	6.5	1.3	4764	chr3R	15735218	intergenic	not near genes	chr3R	15737600	intergenic	not near genes	chr3R	15739982	intergenic	not near genes	chr3R_10_15735001	chr3R_15735001	RAL-821_100b
3439	chr3R	16756294	16756346	chr3R	16762510	16762562	diver	22	6213	14.0	5.0	9.5	2.1	6268	chr3R	16756294	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762562	intron	bxd -	chr3R_22_16755001	chr3R_16755001	RAL-821_100b
3448	chr3R	17294646	17294694	chr3R	17295099	17295147	BS	21	451	10.0	10.0	10.0	1.9	501	chr3R	17294646	intergenic	not near genes	chr3R	17294896	intergenic	not near genes	chr3R	17295147	intergenic	not near genes	chr3R_21_17290001	chr3R_17290001	RAL-821_100b
3458	chr3R	17509238	17509254	chr3R	17516804	17516820	412	15	7565	9.0	33.5	21.2	0.7	7582	chr3R	17509238	intergenic	not near genes	chr3R	17513029	intergenic	not near genes	chr3R	17516820	intergenic	not near genes	chr3R_15_17510001	chr3R_17510001	RAL-821_100b
3465	chr3R	17591266	17591276	chr3R	17591727	17591734	F-element	5	460	33.0	14.0	23.5	0.2	468	chr3R	17591266	intergenic	not near genes	chr3R	17591500	intergenic	not near genes	chr3R	17591734	intergenic	not near genes	chr3R_5_17590001	chr3R_17590001	RAL-821_100b
3466	chr3R	17591277	17591293	chr3R	17591723	17591754	F-element	15	455	22.5	13.0	17.8	0.8	477	chr3R	17591277	intergenic	not near genes	chr3R	17591516	intergenic	not near genes	chr3R	17591754	intergenic	not near genes	chr3R_15_17590001	chr3R_17590001	RAL-821_100b
3467	chr3R	17591294	17591326	chr3R	17591720	17591735	F-element	11	439	9.5	10.5	10.0	1.0	441	chr3R	17591294	intergenic	not near genes	chr3R	17591514	intergenic	not near genes	chr3R	17591735	intergenic	not near genes	chr3R_11_17590001	chr3R_17590001	RAL-821_100b
3469	chr3R	17638290	17638340	chr3R	17638801	17638851	roo	21	509	9.5	5.0	7.2	2.6	561	chr3R	17638290	intron	CG43175 +	chr3R	17638570	intron	CG43175 +	chr3R	17638851	intron,intron	CG43175 +,CR45222 +	chr3R_21_17635001	chr3R_17635001	RAL-821_100b
3476	chr3R	17763136	17763183	chr3R	17763646	17763650	roo	6	498	26.0	14.0	20.0	0.3	514	chr3R	17763136	5` UTR	TyrR -	chr3R	17763393	intergenic	TyrR -	chr3R	17763650	intergenic	TyrR -	chr3R_6_17760001	chr3R_17760001	RAL-821_100b
3486	chr3R	17925832	17925867	chr3R	17927324	17927359	hobo	25	1488	15.5	18.0	16.8	1.4	1527	chr3R	17925832	intron	cpo +	chr3R	17926596	intron	cpo +	chr3R	17927359	intron	cpo +	chr3R_25_17925001	chr3R_17925001	RAL-821_100b
3487	chr3R	17925868	17925879	chr3R	17927320	17927366	hobo	9	1484	11.5	17.0	14.2	0.6	1498	chr3R	17925868	intron	cpo +	chr3R	17926617	intron	cpo +	chr3R	17927366	intron	cpo +	chr3R_9_17925001	chr3R_17925001	RAL-821_100b
3489	chr3R	18032756	18032808	chr3R	18040454	18040506	opus	22	7697	13.0	10.0	11.5	1.8	7750	chr3R	18032756	intergenic	not near genes	chr3R	18036631	intergenic	not near genes	chr3R	18040506	intergenic	not near genes	chr3R_22_18035001	chr3R_18035001	RAL-821_100b
3491	chr3R	18061568	18061609	chr3R	18063161	18063202	F-element	19	1592	8.5	12.5	10.5	1.7	1634	chr3R	18061568	intergenic	not near genes	chr3R	18062385	intergenic	not near genes	chr3R	18063202	intergenic	not near genes	chr3R_19_18060001	chr3R_18060001	RAL-821_100b
3501	chr3R	18331759	18331771	chr3R	18333278	18333283	hopper2	8	1518	31.5	15.5	23.5	0.3	1524	chr3R	18331759	3` UTR	CG15803 -	chr3R	18332521	intron	CG15803 -	chr3R	18333283	3` UTR	CG15803 -	chr3R_8_18330001	chr3R_18330001	RAL-821_100b
3513	chr3R	18606479	18606531	chr3R	18610736	18610787	F-element	26	4256	13.5	13.0	13.2	1.8	4308	chr3R	18606479	intron,intron	qin +,CG14304 -	chr3R	18608633	intron,intron	qin +,CG14304 -	chr3R	18610787	intron,intron	qin +,CG14304 -	chr3R_26_18605001	chr3R_18605001	RAL-821_100b
3528	chr3R	19136406	19136409	chr3R	19139772	19139872	Bari1	22	3379	130.0	63.5	96.8	0.2	3466	chr3R	19136406	exon	Cyp12a4 +	chr3R	19138139	intergenic	not near genes	chr3R	19139872	3` UTR	Ppcs -	chr3R_22_19135001	chr3R_19135001	RAL-821_100b
3531	chr3R	19192947	19193008	chr3R	19197279	19197337	F-element	17	4325	0.5	11.0	5.8	2.5	4390	chr3R	19192947	intron	CG31475 +	chr3R	19195142	intron	CG31475 +	chr3R	19197337	intron	CG31475 +	chr3R_17_19195001	chr3R_19195001	RAL-821_100b
3564	chr3R	20109512	20109571	chr3R	20114741	20114776	copia	18	5229	6.0	9.5	7.8	2.0	5264	chr3R	20109512	intergenic	not near genes	chr3R	20112144	intergenic	not near genes	chr3R	20114776	intergenic	CG10887 +	chr3R_18_20110001	chr3R_20110001	RAL-821_100b
3566	chr3R	20156668	20156719	chr3R	20165863	20165905	roo	46	9192	15.5	9.5	12.5	3.4	9237	chr3R	20156668	intergenic	not near genes	chr3R	20161286	intergenic	not near genes	chr3R	20165905	intergenic	not near genes	chr3R_46_20160001	chr3R_20160001	RAL-821_100b
3576	chr3R	20245255	20245305	chr3R	20248890	20248940	F-element	19	3635	12.0	3.0	7.5	2.2	3685	chr3R	20245255	3` UTR	Nlg4 +	chr3R	20247098	intergenic	not near genes	chr3R	20248940	intergenic	not near genes	chr3R_19_20245001	chr3R_20245001	RAL-821_100b
3577	chr3R	20266501	20266511	chr3R	20272996	20273007	Burdock	6	6496	3.0	19.0	11.0	0.5	6506	chr3R	20266501	intron	cic +	chr3R	20269754	intron	cic +	chr3R	20273007	intron	cic +	chr3R_6_20265001	chr3R_20265001	RAL-821_100b
3578	chr3R	20266519	20266542	chr3R	20272994	20273038	Burdock	17	6491	3.0	18.0	10.5	1.5	6519	chr3R	20266519	intron	cic +	chr3R	20269778	intron	cic +	chr3R	20273038	intron	cic +	chr3R_17_20265001	chr3R_20265001	RAL-821_100b
3581	chr3R	20330978	20331028	chr3R	20331489	20331539	roo	22	510	7.0	7.5	7.2	2.7	561	chr3R	20330978	intergenic	Sirt2 +	chr3R	20331258	intergenic	Sirt2 +	chr3R	20331539	intergenic	not near genes	chr3R_22_20330001	chr3R_20330001	RAL-821_100b
3587	chr3R	20506568	20506574	chr3R	20507396	20507402	BS	6	827	19.0	15.0	17.0	0.3	834	chr3R	20506568	intergenic	Or92a +	chr3R	20506985	intergenic	CG4288 -	chr3R	20507402	3` UTR	CG4288 -	chr3R_6_20505001	chr3R_20505001	RAL-821_100b
3588	chr3R	20506576	20506586	chr3R	20507395	20507414	BS	8	826	15.5	15.0	15.2	0.5	838	chr3R	20506576	intergenic	Or92a +	chr3R	20506995	intergenic	CG4288 -	chr3R	20507414	3` UTR	CG4288 -	chr3R_8_20505001	chr3R_20505001	RAL-821_100b
3589	chr3R	20506588	20506592	chr3R	20507394	20507420	BS	5	819	14.5	14.5	14.5	0.3	832	chr3R	20506588	intergenic	Or92a +	chr3R	20507004	intergenic	CG4288 -	chr3R	20507420	3` UTR	CG4288 -	chr3R_5_20505001	chr3R_20505001	RAL-821_100b
3590	chr3R	20506597	20506617	chr3R	20507389	20507412	BS	14	821	11.0	13.5	12.2	1.1	815	chr3R	20506597	intergenic	Or92a +	chr3R	20507004	intergenic	CG4288 -	chr3R	20507412	3` UTR	CG4288 -	chr3R_14_20505001	chr3R_20505001	RAL-821_100b
3591	chr3R	20512976	20513037	chr3R	20515705	20515765	opus	11	2729	0.0	0.0	0.0	11.0	2789	chr3R	20512976	intergenic	not near genes	chr3R	20514370	intergenic	not near genes	chr3R	20515765	intergenic	not near genes	chr3R_11_20510001	chr3R_20510001	RAL-821_100b
3605	chr3R	20854459	20854466	chr3R	20859276	20859284	Doc	4	4819	16.0	12.0	14.0	0.3	4825	chr3R	20854459	intron	Ir93a -	chr3R	20856872	intron	Ir93a -	chr3R	20859284	exon	Ir93a -	chr3R_4_20855001	chr3R_20855001	RAL-821_100b
3606	chr3R	20854467	20854518	chr3R	20859270	20859307	Doc	16	4793	5.0	10.0	7.5	1.9	4840	chr3R	20854467	intron	Ir93a -	chr3R	20856887	intron	Ir93a -	chr3R	20859307	exon	Ir93a -	chr3R_16_20855001	chr3R_20855001	RAL-821_100b
3615	chr3R	21141660	21141667	chr3R	21150156	21150168	Tirant	4	8499	22.0	10.0	16.0	0.2	8508	chr3R	21141660	intron	SNF4Agamma +	chr3R	21145914	intron	SNF4Agamma +	chr3R	21150168	intron	SNF4Agamma +	chr3R_4_21145001	chr3R_21145001	RAL-821_100b
3616	chr3R	21141668	21141707	chr3R	21150154	21150211	Tirant	23	8496	11.0	9.0	10.0	2.1	8543	chr3R	21141668	intron	SNF4Agamma +	chr3R	21145940	intron	SNF4Agamma +	chr3R	21150211	intron	SNF4Agamma +	chr3R_23_21145001	chr3R_21145001	RAL-821_100b
3632	chr3R	21608986	21609002	chr3R	21611645	21611661	NOF	13	2657	22.5	13.0	17.8	0.7	2675	chr3R	21608986	intron	InR -	chr3R	21610324	intron	InR -	chr3R	21611661	intron	InR -	chr3R_13_21610001	chr3R_21610001	RAL-821_100b
3633	chr3R	21609005	21609033	chr3R	21611637	21611692	NOF	20	2651	13.0	9.5	11.2	1.6	2687	chr3R	21609005	intron	InR -	chr3R	21610348	intron	InR -	chr3R	21611692	intron	InR -	chr3R_20_21610001	chr3R_21610001	RAL-821_100b
3637	chr3R	21761097	21761139	chr3R	21768514	21768534	mdg1	24	7412	21.0	13.0	17.0	1.3	7437	chr3R	21761097	exon	CG42335 +	chr3R	21764816	intron	CG42335 +	chr3R	21768534	exon	CG42335 +	chr3R_24_21760001	chr3R_21760001	RAL-821_100b
3638	chr3R	21761141	21761153	chr3R	21768512	21768570	mdg1	10	7398	12.0	13.0	12.5	0.7	7429	chr3R	21761141	exon	CG42335 +	chr3R	21764856	intron	CG42335 +	chr3R	21768570	exon	CG42335 +	chr3R_10_21760001	chr3R_21760001	RAL-821_100b
3669	chr3R	22234662	22234714	chr3R	22236001	22236058	pogo	28	1338	12.5	10.0	11.2	2.3	1396	chr3R	22234662	intron	SKIP +	chr3R	22235360	intron	SKIP +	chr3R	22236058	intron	SKIP +	chr3R_28_22235001	chr3R_22235001	RAL-821_100b
3670	chr3R	22239466	22239524	chr3R	22248551	22248592	roo	19	9075	10.0	1.5	5.8	2.8	9126	chr3R	22239466	intron	SKIP +	chr3R	22244029	intron	SKIP +	chr3R	22248592	intron	SKIP +	chr3R_19_22240001	chr3R_22240001	RAL-821_100b
3674	chr3R	22450520	22450541	chr3R	22453185	22453206	NOF	16	2662	39.5	16.0	27.8	0.6	2686	chr3R	22450520	intron	CG34376 +	chr3R	22451863	intron	CG34376 +	chr3R	22453206	intron	CG34376 +	chr3R_16_22450001	chr3R_22450001	RAL-821_100b
3675	chr3R	22450542	22450575	chr3R	22453183	22453240	NOF	28	2659	17.5	14.0	15.8	1.7	2698	chr3R	22450542	intron	CG34376 +	chr3R	22451891	intron	CG34376 +	chr3R	22453240	intron	CG34376 +	chr3R_28_22450001	chr3R_22450001	RAL-821_100b
3684	chr3R	22881184	22881215	chr3R	22884915	22884946	Doc	15	3731	10.5	14.0	12.2	1.1	3762	chr3R	22881184	intergenic	not near genes	chr3R	22883065	intergenic	not near genes	chr3R	22884946	intergenic	not near genes	chr3R_15_22880001	chr3R_22880001	RAL-821_100b
3717	chr3R	23558374	23558427	chr3R	23560180	23560233	Bari1	28	1803	7.0	12.5	9.8	2.6	1859	chr3R	23558374	intron	beat-IV +	chr3R	23559304	intron	beat-IV +	chr3R	23560233	intron	beat-IV +	chr3R_28_23555001	chr3R_23555001	RAL-821_100b
3723	chr3R	23684674	23684689	chr3R	23685185	23685200	roo	9	511	40.5	20.5	30.5	0.3	526	chr3R	23684674	exon	CG18754 +	chr3R	23684937	intron	CG18754 +	chr3R	23685200	exon	CG18754 +	chr3R_9_23680001	chr3R_23680001	RAL-821_100b
3724	chr3R	23684690	23684729	chr3R	23685184	23685208	roo	30	501	17.5	19.5	18.5	1.5	518	chr3R	23684690	exon	CG18754 +	chr3R	23684949	intron	CG18754 +	chr3R	23685208	exon	CG18754 +	chr3R_30_23680001	chr3R_23680001	RAL-821_100b
3726	chr3R	23835384	23835433	chr3R	23844559	23844604	roo	29	9174	7.5	3.0	5.2	4.7	9220	chr3R	23835384	intron	CG34355 +	chr3R	23839994	intron	CG34355 +	chr3R	23844604	intron	CG34355 +	chr3R_29_23835001	chr3R_23835001	RAL-821_100b
3727	chr3R	23851062	23851088	chr3R	23858754	23858780	opus	17	7690	7.5	16.0	11.8	1.3	7718	chr3R	23851062	3` UTR	CG34355 +	chr3R	23854921	intergenic	not near genes	chr3R	23858780	intergenic	not near genes	chr3R_17_23850001	chr3R_23850001	RAL-821_100b
3735	chr3R	24072062	24072111	chr3R	24072524	24072558	jockey	39	458	15.0	19.5	17.2	2.1	496	chr3R	24072062	intron	4EHP -	chr3R	24072310	intron	4EHP -	chr3R	24072558	intron	4EHP -	chr3R_39_24070001	chr3R_24070001	RAL-821_100b
3736	chr3R	24076899	24076905	chr3R	24078391	24078395	hobo	4	1491	26.5	21.0	23.8	0.2	1496	chr3R	24076899	intron	4EHP -	chr3R	24077647	intron	4EHP -	chr3R	24078395	intron	4EHP -	chr3R_4_24075001	chr3R_24075001	RAL-821_100b
3737	chr3R	24076906	24076921	chr3R	24078387	24078399	hobo	10	1480	22.5	18.5	20.5	0.5	1493	chr3R	24076906	intron	4EHP -	chr3R	24077652	intron	4EHP -	chr3R	24078399	intron	4EHP -	chr3R_10_24075001	chr3R_24075001	RAL-821_100b
3738	chr3R	24076922	24076932	chr3R	24078384	24078402	hobo	7	1475	19.5	14.0	16.8	0.4	1480	chr3R	24076922	intron	4EHP -	chr3R	24077662	intron	4EHP -	chr3R	24078402	intron	4EHP -	chr3R_7_24075001	chr3R_24075001	RAL-821_100b
3739	chr3R	24076933	24076946	chr3R	24078377	24078438	hobo	15	1482	9.5	11.5	10.5	1.3	1505	chr3R	24076933	intron	4EHP -	chr3R	24077686	intron	4EHP -	chr3R	24078438	intron	4EHP -	chr3R_15_24075001	chr3R_24075001	RAL-821_100b
3743	chr3R	24207195	24207242	chr3R	24212296	24212313	flea	38	5098	26.5	15.0	20.8	1.7	5118	chr3R	24207195	intron	twin -	chr3R	24209754	intron	twin -	chr3R	24212313	intron	twin -	chr3R_38_24205001	chr3R_24205001	RAL-821_100b
3749	chr3R	24493255	24493268	chr3R	24493509	24493522	BS	12	253	31.0	13.5	22.2	0.5	267	chr3R	24493255	intergenic	not near genes	chr3R	24493388	intergenic	not near genes	chr3R	24493522	intergenic	not near genes	chr3R_12_24490001	chr3R_24490001	RAL-821_100b
3750	chr3R	24493270	24493307	chr3R	24493501	24493553	BS	40	251	14.5	12.0	13.2	2.8	283	chr3R	24493270	intergenic	not near genes	chr3R	24493412	intergenic	not near genes	chr3R	24493553	intergenic	not near genes	chr3R_40_24490001	chr3R_24490001	RAL-821_100b
3754	chr3R	24594653	24594668	chr3R	24594918	24594929	pogo	9	264	12.5	20.0	16.2	0.5	276	chr3R	24594653	intron	mld +	chr3R	24594791	intron	mld +	chr3R	24594929	intron	mld +	chr3R_9_24590001	chr3R_24590001	RAL-821_100b
3760	chr3R	24730067	24730103	chr3R	24732470	24732483	Doc	19	2401	15.5	0.0	7.8	2.2	2416	chr3R	24730067	intron	tok +	chr3R	24731275	intron	tok +	chr3R	24732483	intron	tok +	chr3R_19_24730001	chr3R_24730001	RAL-821_100b
3763	chr3R	24927113	24927150	chr3R	24931919	24931945	Doc	25	4809	14.0	14.0	14.0	1.7	4832	chr3R	24927113	intergenic	Trf4-2 +	chr3R	24929529	intergenic	not near genes	chr3R	24931945	intergenic	CG11771 +	chr3R_25_24925001	chr3R_24925001	RAL-821_100b
3795	chr3R	25725807	25725861	chr3R	25734992	25735046	roo	17	9184	2.5	4.5	3.5	3.8	9239	chr3R	25725807	intron	LpR2 -	chr3R	25730426	intron	LpR2 -	chr3R	25735046	intron	LpR2 -	chr3R_17_25730001	chr3R_25730001	RAL-821_100b
3798	chr3R	25832673	25832722	chr3R	25841879	25841903	roo	29	9203	10.0	17.0	13.5	2.0	9230	chr3R	25832673	exon	alpha4GT2 +	chr3R	25837288	intron	alpha4GT2 +	chr3R	25841903	exon	alpha4GT2 +	chr3R_29_25835001	chr3R_25835001	RAL-821_100b
3816	chr3R	26108799	26108841	chr3R	26117407	26117421	Tirant	14	8600	18.5	1.0	9.8	1.3	8622	chr3R	26108799	5` UTR	CG31324 +	chr3R	26113110	intron	CG31324 +	chr3R	26117421	intron	CG31324 +	chr3R_14_26110001	chr3R_26110001	RAL-821_100b
3821	chr3R	26215768	26215798	chr3R	26221749	26221777	297	5	5980	6.5	9.0	7.8	0.6	6009	chr3R	26215768	intergenic	not near genes	chr3R	26218772	intergenic	not near genes	chr3R	26221777	intergenic	not near genes	chr3R_5_26215001	chr3R_26215001	RAL-821_100b
3832	chr3R	26376301	26376343	chr3R	26385486	26385515	roo	28	9183	12.5	0.0	6.2	3.9	9214	chr3R	26376301	intergenic	not near genes	chr3R	26380908	intergenic	not near genes	chr3R	26385515	intergenic	not near genes	chr3R_28_26380001	chr3R_26380001	RAL-821_100b
3835	chr3R	26510496	26510535	chr3R	26519576	26519614	roo	21	9079	8.0	11.5	9.8	1.9	9118	chr3R	26510496	intron	plum -	chr3R	26515055	intron	plum -	chr3R	26519614	intron,5` UTR	plum -,CR45226 +	chr3R_21_26515001	chr3R_26515001	RAL-821_100b
3838	chr3R	26558299	26558359	chr3R	26565637	26565675	Stalker4	36	7330	8.5	8.5	8.5	3.8	7376	chr3R	26558299	intron	scrib +	chr3R	26561987	intron	scrib +	chr3R	26565675	intron	scrib +	chr3R_36_26560001	chr3R_26560001	RAL-821_100b
3840	chr3R	26642727	26642759	chr3R	26643140	26643176	jockey	22	414	6.5	16.0	11.2	1.8	449	chr3R	26642727	intergenic	not near genes	chr3R	26642952	intergenic	not near genes	chr3R	26643176	intergenic	not near genes	chr3R_22_26640001	chr3R_26640001	RAL-821_100b
3851	chr3R	26810527	26810580	chr3R	26811037	26811090	roo	38	508	13.5	11.5	12.5	2.8	563	chr3R	26810527	intron	Tl +	chr3R	26810808	intron	Tl +	chr3R	26811090	intron	Tl +	chr3R_38_26810001	chr3R_26810001	RAL-821_100b
3856	chr3R	27007382	27007437	chr3R	27016542	27016570	roo	32	9150	8.0	14.0	11.0	2.7	9188	chr3R	27007382	intron	RYa-R +	chr3R	27011976	intron	RYa-R +	chr3R	27016570	intron	RYa-R +	chr3R_32_27010001	chr3R_27010001	RAL-821_100b
3862	chr3R	27140490	27140548	chr3R	27148125	27148178	412	44	7633	14.5	20.0	17.2	2.4	7688	chr3R	27140490	intron	CG6051 -	chr3R	27144334	intron	CG6051 -	chr3R	27148178	intron	CG6051 -	chr3R_44_27140001	chr3R_27140001	RAL-821_100b
3868	chr3R	27342767	27342821	chr3R	27351373	27351427	Tirant	40	8603	17.5	11.5	14.5	2.6	8660	chr3R	27342767	intron	CG42534 +	chr3R	27347097	intron	CG42534 +	chr3R	27351427	intron	CG42534 +	chr3R_40_27345001	chr3R_27345001	RAL-821_100b
3875	chr3R	27521140	27521190	chr3R	27530369	27530397	roo	21	9232	10.0	9.0	9.5	2.0	9257	chr3R	27521140	intron	CG12885 +	chr3R	27525768	intron	CG12885 +	chr3R	27530397	intron	CG12885 +	chr3R_21_27525001	chr3R_27525001	RAL-821_100b
3881	chr3R	27725543	27725594	chr3R	27731010	27731032	I-element	43	5465	9.0	12.5	10.8	3.6	5489	chr3R	27725543	intergenic	not near genes	chr3R	27728288	intergenic	not near genes	chr3R	27731032	intergenic	not near genes	chr3R_43_27725001	chr3R_27725001	RAL-821_100b
3883	chr3R	27791622	27791647	chr3R	27794792	27794823	Rt1c	24	3171	27.0	25.5	26.2	0.9	3201	chr3R	27791622	intron	CG34353 -	chr3R	27793222	intron	CG34353 -	chr3R	27794823	intron	CG34353 -	chr3R_24_27790001	chr3R_27790001	RAL-821_100b
3885	chr3R	27856734	27856786	chr3R	27858242	27858294	hopper2	38	1507	19.0	10.5	14.8	2.4	1560	chr3R	27856734	intron	CG34353 -	chr3R	27857514	intron	CG34353 -	chr3R	27858294	intron	CG34353 -	chr3R_38_27855001	chr3R_27855001	RAL-821_100b
3886	chr3R	27862931	27862986	chr3R	27868261	27868276	Transpac	30	5320	12.0	12.0	12.0	2.3	5345	chr3R	27862931	intron	CG34353 -	chr3R	27865604	intron	CG34353 -	chr3R	27868276	intron	CG34353 -	chr3R_30_27865001	chr3R_27865001	RAL-821_100b
3887	chr3R	27875680	27875697	chr3R	27882760	27882777	297	6	7080	32.5	19.5	26.0	0.2	7097	chr3R	27875680	intron	CG34353 -	chr3R	27879228	intron	CG34353 -	chr3R	27882777	intron	CG34353 -	chr3R_6_27875001	chr3R_27875001	RAL-821_100b
3888	chr3R	27875698	27875729	chr3R	27882759	27882809	297	22	7079	10.0	18.5	14.2	1.4	7111	chr3R	27875698	intron	CG34353 -	chr3R	27879254	intron	CG34353 -	chr3R	27882809	intron	CG34353 -	chr3R_22_27875001	chr3R_27875001	RAL-821_100b
3895	chr3R	28068479	28068527	chr3R	28073941	28073962	I-element	24	5464	1.0	13.0	7.0	3.0	5483	chr3R	28068479	intron	CG34362 +	chr3R	28071220	intron	CG34362 +	chr3R	28073962	intron	CG34362 +	chr3R_24_28070001	chr3R_28070001	RAL-821_100b
3898	chr3R	28173645	28173702	chr3R	28181100	28181157	mdg1	27	7454	7.0	7.0	7.0	3.4	7512	chr3R	28173645	intron	CG34354 +	chr3R	28177401	intron	CG34354 +	chr3R	28181157	intron	CG34354 +	chr3R_27_28175001	chr3R_28175001	RAL-821_100b
3902	chr3R	28253334	28253368	chr3R	28255857	28255903	jockey	26	2531	3.5	11.0	7.2	3.2	2569	chr3R	28253334	intergenic	not near genes	chr3R	28254618	intergenic	not near genes	chr3R	28255903	intergenic	not near genes	chr3R_26_28250001	chr3R_28250001	RAL-821_100b
3905	chr3R	28302080	28302117	chr3R	28302547	28302584	jockey	27	466	10.5	15.5	13.0	1.9	504	chr3R	28302080	intergenic	not near genes	chr3R	28302332	intergenic	not near genes	chr3R	28302584	intergenic	not near genes	chr3R_27_28300001	chr3R_28300001	RAL-821_100b
3920	chr3R	28758261	28758286	chr3R	28763903	28763918	roo	13	5640	17.0	0.0	8.5	1.4	5657	chr3R	28758261	intergenic	aqrs -	chr3R	28761090	intergenic	not near genes	chr3R	28763918	intergenic	not near genes	chr3R_13_28760001	chr3R_28760001	RAL-821_100b
3921	chr3R	28758298	28758319	chr3R	28771330	28771339	Stalker4	7	13030	6.5	10.0	8.2	0.8	13041	chr3R	28758298	intergenic	aqrs -	chr3R	28764818	intergenic	not near genes	chr3R	28771339	intergenic	not near genes	chr3R_7_28760001	chr3R_28760001	RAL-821_100b
3922	chr3R	28763901	28763915	chr3R	28771369	28771378	Stalker4	7	7467	0.0	19.5	9.8	0.6	7477	chr3R	28763901	intergenic	not near genes	chr3R	28767640	intergenic	not near genes	chr3R	28771378	intergenic	not near genes	chr3R_7_28765001	chr3R_28765001	RAL-821_100b
3923	chr3R	28792852	28792866	chr3R	28797972	28797986	jockey	6	5120	17.5	14.0	15.8	0.4	5134	chr3R	28792852	intergenic	not near genes	chr3R	28795419	intergenic	not near genes	chr3R	28797986	intergenic	not near genes	chr3R_6_28795001	chr3R_28795001	RAL-821_100b
3924	chr3R	28792875	28792882	chr3R	28797970	28797977	jockey	5	5105	12.5	14.0	13.2	0.4	5102	chr3R	28792875	intergenic	not near genes	chr3R	28795426	intergenic	not near genes	chr3R	28797977	intergenic	not near genes	chr3R_5_28795001	chr3R_28795001	RAL-821_100b
3925	chr3R	28792885	28792902	chr3R	28797967	28798022	jockey	7	5104	6.5	12.5	9.5	0.7	5137	chr3R	28792885	intergenic	not near genes	chr3R	28795454	intergenic	not near genes	chr3R	28798022	intergenic	not near genes	chr3R_7_28795001	chr3R_28795001	RAL-821_100b
3941	chr3R	29079383	29079409	chr3R	29080780	29080801	NOF	17	1396	3.5	13.0	8.2	1.8	1418	chr3R	29079383	intron	CG11873 +	chr3R	29080092	intron	CG11873 +	chr3R	29080801	intron	CG11873 +	chr3R_17_29080001	chr3R_29080001	RAL-821_100b
3956	chr3R	29319809	29319838	chr3R	29320153	29320181	jockey	18	344	12.5	12.5	12.5	1.3	372	chr3R	29319809	intergenic	Cnx99A -	chr3R	29319995	intergenic	Cnx99A -	chr3R	29320181	intergenic	not near genes	chr3R_18_29315001	chr3R_29315001	RAL-821_100b
3957	chr3R	29319839	29319852	chr3R	29320152	29320196	jockey	12	338	9.5	12.5	11.0	1.0	357	chr3R	29319839	intergenic	Cnx99A -	chr3R	29320018	intergenic	Cnx99A -	chr3R	29320196	intergenic	not near genes	chr3R_12_29320001	chr3R_29320001	RAL-821_100b
3964	chr3R	29406594	29406607	chr3R	29407905	29407912	jockey	7	1309	35.0	11.0	23.0	0.3	1318	chr3R	29406594	intron	Ptp99A +	chr3R	29407253	intron	Ptp99A +	chr3R	29407912	intron	Ptp99A +	chr3R_7_29405001	chr3R_29405001	RAL-821_100b
3965	chr3R	29406608	29406647	chr3R	29407904	29407936	jockey	33	1303	16.0	10.5	13.2	2.3	1328	chr3R	29406608	intron	Ptp99A +	chr3R	29407272	intron	Ptp99A +	chr3R	29407936	intron	Ptp99A +	chr3R_33_29405001	chr3R_29405001	RAL-821_100b
3981	chr3R	29738241	29738294	chr3R	29739733	29739786	hobo	38	1490	12.5	12.5	12.5	2.8	1545	chr3R	29738241	intergenic	CG1969 +,CG7598 +	chr3R	29739014	intron	CG1969 +	chr3R	29739786	5` UTR	CG1969 +	chr3R_38_29735001	chr3R_29735001	RAL-821_100b
3982	chr3R	29881996	29882050	chr3R	29891178	29891232	roo	33	9181	11.5	17.0	14.2	2.2	9236	chr3R	29881996	intron	CG31038 +	chr3R	29886614	intron	CG31038 +	chr3R	29891232	intron	CG31038 +	chr3R_33_29885001	chr3R_29885001	RAL-821_100b
3990	chr3R	30084832	30084879	chr3R	30086319	30086361	hobo	26	1487	16.0	13.0	14.5	1.7	1529	chr3R	30084832	intron	sima +	chr3R	30085596	intron	sima +	chr3R	30086361	intron	sima +	chr3R_26_30085001	chr3R_30085001	RAL-821_100b
3998	chr3R	30238735	30238795	chr3R	30239924	30239955	1360	25	1187	8.0	0.0	4.0	5.0	1220	chr3R	30238735	intergenic	not near genes	chr3R	30239345	intergenic	not near genes	chr3R	30239955	intergenic	not near genes	chr3R_25_30235001	chr3R_30235001	RAL-821_100b
4004	chr3R	30317314	30317356	chr3R	30324921	30324973	roo	16	7615	2.5	8.0	5.2	2.6	7659	chr3R	30317314	intron	hdc +	chr3R	30321144	intron	hdc +	chr3R	30324973	intron	hdc +	chr3R_16_30320001	chr3R_30320001	RAL-821_100b
4007	chr3R	30375525	30375570	chr3R	30383168	30383213	412	14	7645	9.0	9.5	9.2	1.4	7688	chr3R	30375525	intergenic	not near genes	chr3R	30379369	intergenic	not near genes	chr3R	30383213	intergenic	not near genes	chr3R_14_30375001	chr3R_30375001	RAL-821_100b
4008	chr3R	30396197	30396242	chr3R	30404483	30404533	roo	32	8288	9.0	10.0	9.5	3.0	8336	chr3R	30396197	intergenic	not near genes	chr3R	30400365	intergenic	not near genes	chr3R	30404533	5` UTR	CR45570 +	chr3R_32_30400001	chr3R_30400001	RAL-821_100b
4012	chr3R	30480458	30480467	chr3R	30482951	30482958	jockey	5	2491	31.0	12.5	21.8	0.2	2500	chr3R	30480458	intron	PH4alphaEFB +	chr3R	30481708	intron	PH4alphaEFB +	chr3R	30482958	intron	PH4alphaEFB +	chr3R_5_30480001	chr3R_30480001	RAL-821_100b
4013	chr3R	30480468	30480511	chr3R	30482940	30482999	jockey	26	2489	5.5	12.5	9.0	2.6	2531	chr3R	30480468	intron	PH4alphaEFB +	chr3R	30481734	intron	PH4alphaEFB +	chr3R	30482999	intron	PH4alphaEFB +	chr3R_26_30480001	chr3R_30480001	RAL-821_100b
4023	chr3R	30679495	30679552	chr3R	30686989	30687046	blood	30	7494	5.0	8.5	6.8	3.8	7551	chr3R	30679495	intergenic	not near genes	chr3R	30683270	intergenic	not near genes	chr3R	30687046	intergenic	not near genes	chr3R_30_30680001	chr3R_30680001	RAL-821_100b
4031	chr3R	30818789	30818840	chr3R	30820379	30820393	1360	25	1587	14.5	16.5	15.5	1.5	1604	chr3R	30818789	intron	cindr +	chr3R	30819591	intron	cindr +	chr3R	30820393	intron	cindr +	chr3R_25_30815001	chr3R_30815001	RAL-821_100b
4039	chr3R	31074207	31074258	chr3R	31081830	31081881	springer	30	7619	17.0	16.0	16.5	1.7	7674	chr3R	31074207	intron	Sox100B +	chr3R	31078044	intron	Sox100B +	chr3R	31081881	intron	Sox100B +	chr3R_30_31075001	chr3R_31075001	RAL-821_100b
4043	chr3R	31279347	31279396	chr3R	31285563	31285581	diver	30	6211	11.0	9.5	10.2	2.7	6234	chr3R	31279347	intergenic	not near genes	chr3R	31282464	intergenic	not near genes	chr3R	31285581	intergenic	not near genes	chr3R_30_31280001	chr3R_31280001	RAL-821_100b
4046	chr3R	31413077	31413121	chr3R	31418288	31418311	copia	22	5217	11.0	2.5	6.8	2.8	5234	chr3R	31413077	intron	Gprk2 +	chr3R	31415694	intron	Gprk2 +	chr3R	31418311	intron	Gprk2 +	chr3R_22_31415001	chr3R_31415001	RAL-821_100b
4054	chr3R	31691508	31691562	chr3R	31696298	31696353	Doc	36	4788	11.5	20.0	15.8	2.1	4845	chr3R	31691508	intergenic	not near genes	chr3R	31693930	intergenic	not near genes	chr3R	31696353	intergenic	not near genes	chr3R_36_31690001	chr3R_31690001	RAL-821_100b
4068	chr3R	31997967	31998022	chr3R	32005462	32005514	blood	37	7493	10.5	8.5	9.5	3.5	7547	chr3R	31997967	intron	heph -	chr3R	32001740	intron	heph -	chr3R	32005514	intron	heph -	chr3R_37_32000001	chr3R_32000001	RAL-821_100b
4073	chr4	76474	76515	chr4	81941	81983	I-element	17	5468	14.5	12.0	13.2	1.2	5509	chr4	76474	intron	pan +	chr4	79228	intron	pan +	chr4	81983	intron	pan +	chr4_17_75001	chr4_75001	RAL-821_100b
4078	chr4	319987	320014	chr4	328176	328215	Stalker2	10	8199	11.5	13.5	12.5	0.7	8228	chr4	319987	3` UTR	CG32850 +	chr4	324101	intron	CG32850 +	chr4	328215	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_10_320001	chr4_320001	RAL-821_100b
4080	chr4	671587	671630	chr4	680187	680238	Tirant	44	8604	10.5	11.0	10.8	3.7	8651	chr4	671587	intron	CG11360 +	chr4	675912	intron	CG11360 +	chr4	680238	intron	CG11360 +	chr4_44_675001	chr4_675001	RAL-821_100b
4086	chrX	295832	295882	chrX	303476	303517	412	23	7642	5.5	10.0	7.8	2.6	7685	chrX	295832	intron	CG3777 +	chrX	299674	intron	CG3777 +	chrX	303517	intron	CG3777 +	chrX_23_295001	chrX_295001	RAL-821_100b
4087	chrX	318448	318463	chrX	323559	323574	flea	8	5111	25.5	14.5	20.0	0.4	5126	chrX	318448	intron,intron	CG3777 +,CG32816 -	chrX	321011	intron,intron	CG3777 +,CG32816 -	chrX	323574	intron,intron	CG3777 +,CG32816 -	chrX_8_320001	chrX_320001	RAL-821_100b
4088	chrX	318464	318495	chrX	323555	323606	flea	20	5107	16.0	14.0	15.0	1.2	5142	chrX	318464	intron,intron	CG3777 +,CG32816 -	chrX	321035	intron,intron	CG3777 +,CG32816 -	chrX	323606	intron,intron	CG3777 +,CG32816 -	chrX_20_320001	chrX_320001	RAL-821_100b
4089	chrX	428396	428405	chrX	434606	434615	3S18	6	6209	29.0	9.0	19.0	0.3	6219	chrX	428396	intron	CG32816 -	chrX	431506	intron	CG32816 -	chrX	434615	intron	CG32816 -	chrX_6_430001	chrX_430001	RAL-821_100b
4090	chrX	428406	428452	chrX	434604	434641	3S18	27	6207	14.5	9.0	11.8	2.1	6235	chrX	428406	intron	CG32816 -	chrX	431524	intron	CG32816 -	chrX	434641	intron	CG32816 -	chrX_27_430001	chrX_430001	RAL-821_100b
4091	chrX	551400	551421	chrX	558987	559008	412	14	7586	24.5	12.0	18.2	0.7	7608	chrX	551400	intron	Appl +	chrX	555204	intron	Appl +	chrX	559008	intron	Appl +	chrX_14_555001	chrX_555001	RAL-821_100b
4092	chrX	551423	551455	chrX	558984	559001	412	34	7576	15.0	10.5	12.8	2.5	7578	chrX	551423	intron	Appl +	chrX	555212	intron	Appl +	chrX	559001	intron	Appl +	chrX_34_555001	chrX_555001	RAL-821_100b
4100	chrX	812254	812299	chrX	817903	817953	297	29	5646	6.0	9.0	7.5	3.4	5699	chrX	812254	intron	CG43867 -	chrX	815104	intron	CG43867 -	chrX	817953	intron	CG43867 -	chrX_29_815001	chrX_815001	RAL-821_100b
4101	chrX	827582	827593	chrX	835399	835410	roo	4	7817	20.5	0.0	10.2	0.4	7828	chrX	827582	intron	CG43867 -	chrX	831496	intron	CG43867 -	chrX	835410	intron	CG43867 -	chrX_4_830001	chrX_830001	RAL-821_100b
4102	chrX	827595	827635	chrX	835394	835472	roo	18	7827	11.0	0.0	5.5	2.8	7877	chrX	827595	intron	CG43867 -	chrX	831534	intron	CG43867 -	chrX	835472	intron	CG43867 -	chrX_18_830001	chrX_830001	RAL-821_100b
4103	chrX	906677	906730	chrX	908491	908544	S-element	42	1812	14.5	21.0	17.8	2.2	1867	chrX	906677	intron	CG43867 -	chrX	907610	intron	CG43867 -	chrX	908544	intron	CG43867 -	chrX_42_905001	chrX_905001	RAL-821_100b
4109	chrX	1063733	1063748	chrX	1072551	1072561	roo	5	8817	19.0	15.0	17.0	0.3	8828	chrX	1063733	intron	CR44779 +	chrX	1068147	intron	CR44779 +	chrX	1072561	intron	CR44779 +	chrX_5_1065001	chrX_1065001	RAL-821_100b
4114	chrX	1357755	1357805	chrX	1367950	1368000	Doc	26	10194	12.0	14.5	13.2	1.8	10245	chrX	1357755	intergenic	png -	chrX	1362878	intergenic	not near genes	chrX	1368000	intergenic	not near genes	chrX_26_1360001	chrX_1360001	RAL-821_100b
4118	chrX	1518021	1518066	chrX	1523448	1523493	jockey	27	5423	10.0	11.5	10.8	2.3	5472	chrX	1518021	intergenic	inc +	chrX	1520757	intergenic	not near genes	chrX	1523493	intergenic	not near genes	chrX_27_1520001	chrX_1520001	RAL-821_100b
4119	chrX	1627967	1628002	chrX	1635443	1635458	gtwin	15	7484	8.0	13.5	10.8	1.3	7491	chrX	1627967	intron,intron	Mur2B -,br +	chrX	1631712	intron,intron	Mur2B -,br +	chrX	1635458	intron,intron	Mur2B -,br +	chrX_15_1630001	chrX_1630001	RAL-821_100b
4121	chrX	1930511	1930567	chrX	1938106	1938163	opus	21	7595	4.0	5.5	4.8	3.6	7652	chrX	1930511	3` UTR	CG11596 +	chrX	1934337	intergenic	not near genes	chrX	1938163	3` UTR	CG3857 -	chrX_21_1930001	chrX_1930001	RAL-821_100b
4122	chrX	1954869	1954917	chrX	1962824	1962852	Stalker2	32	7952	9.5	5.0	7.2	3.9	7983	chrX	1954869	intron	Hr4 +	chrX	1958860	intron	Hr4 +	chrX	1962852	intron	Hr4 +	chrX_32_1955001	chrX_1955001	RAL-821_100b
4126	chrX	2399818	2399827	chrX	2408191	2408205	roo	5	8375	34.0	0.0	17.0	0.3	8387	chrX	2399818	intergenic	not near genes	chrX	2404012	intergenic	not near genes	chrX	2408205	intergenic	not near genes	chrX_5_2400001	chrX_2400001	RAL-821_100b
4127	chrX	2399829	2399871	chrX	2408188	2408232	roo	14	8360	12.0	0.0	6.0	2.0	8403	chrX	2399829	intergenic	not near genes	chrX	2404030	intergenic	not near genes	chrX	2408232	intergenic	not near genes	chrX_14_2400001	chrX_2400001	RAL-821_100b
4133	chrX	2610363	2610413	chrX	2617505	2617555	HMS-Beagle	10	7138	12.0	9.0	10.5	0.9	7192	chrX	2610363	intergenic	CG8636 -	chrX	2613959	intergenic	not near genes	chrX	2617555	intergenic	Tsp3A -	chrX_10_2610001	chrX_2610001	RAL-821_100b
4134	chrX	2664352	2664401	chrX	2665533	2665572	1360	7	1175	5.0	0.0	2.5	2.0	1220	chrX	2664352	intron	sgg +	chrX	2664962	intron	sgg +	chrX	2665572	intron	sgg +	chrX_7_2660001	chrX_2660001	RAL-821_100b
4135	chrX	2823769	2823778	chrX	2832342	2832350	roo	9	8572	23.0	11.5	17.2	0.5	8581	chrX	2823769	intron	kirre +	chrX	2828060	intron	kirre +	chrX	2832350	intron	kirre +	chrX_9_2825001	chrX_2825001	RAL-821_100b
4136	chrX	2844876	2844930	chrX	2852311	2852365	mdg1	20	7434	6.5	9.5	8.0	2.2	7489	chrX	2844876	intron	kirre +	chrX	2848620	intron	kirre +	chrX	2852365	intron	kirre +	chrX_20_2845001	chrX_2845001	RAL-821_100b
4140	chrX	3058002	3058050	chrX	3058268	3058316	pogo	14	265	7.0	10.0	8.5	1.5	314	chrX	3058002	intron	kirre +	chrX	3058159	intron	kirre +	chrX	3058316	intron	kirre +	chrX_14_3055001	chrX_3055001	RAL-821_100b
4141	chrX	3075608	3075649	chrX	3080941	3080973	Transpac	9	5332	5.0	0.5	2.8	2.4	5365	chrX	3075608	intron	kirre +	chrX	3078290	intron	kirre +	chrX	3080973	intron	kirre +	chrX_9_3075001	chrX_3075001	RAL-821_100b
4146	chrX	3218488	3218535	chrX	3227662	3227709	roo	11	9174	6.0	8.5	7.2	1.3	9221	chrX	3218488	intron	dnc +	chrX	3223098	intron	dnc +	chrX	3227709	intron	dnc +	chrX_11_3220001	chrX_3220001	RAL-821_100b
4154	chrX	3414999	3415016	chrX	3421210	3421226	3S18	4	6210	3.5	6.0	4.8	0.7	6227	chrX	3414999	intron,intron	CR44999 +,CG12535 -	chrX	3418112	intron,intron	CR44999 +,CG12535 -	chrX	3421226	intron,intron	CR44999 +,CG12535 -	chrX_4_3415001	chrX_3415001	RAL-821_100b
4155	chrX	3415018	3415048	chrX	3421205	3421258	3S18	18	6206	1.5	5.0	3.2	4.3	6240	chrX	3415018	intron,intron	CR44999 +,CG12535 -	chrX	3418138	intron,intron	CR44999 +,CG12535 -	chrX	3421258	intron,intron	CR44999 +,CG12535 -	chrX_18_3415001	chrX_3415001	RAL-821_100b
4156	chrX	3493077	3493121	chrX	3502250	3502304	roo	21	9176	8.5	6.0	7.2	2.6	9227	chrX	3493077	intron,intron	CR44999 +,Gas8 -	chrX	3497690	intron,intron	CR44999 +,Gas8 -	chrX	3502304	intron,intron	CR44999 +,Gas8 -	chrX_21_3495001	chrX_3495001	RAL-821_100b
4160	chrX	3597528	3597540	chrX	3619721	3619732	roo	6	22193	25.0	9.0	17.0	0.3	22204	chrX	3597528	intron	AstA-R1 +	chrX	3608630	intron	AstA-R1 +	chrX	3619732	intron	AstA-R1 +	chrX_6_3605001	chrX_3605001	RAL-821_100b
4161	chrX	3597542	3597579	chrX	3619718	3619774	roo	26	22184	9.5	8.0	8.8	2.7	22232	chrX	3597542	intron	AstA-R1 +	chrX	3608658	intron	AstA-R1 +	chrX	3619774	intron	AstA-R1 +	chrX_26_3605001	chrX_3605001	RAL-821_100b
4167	chrX	3726763	3726792	chrX	3730168	3730214	NOF	20	3417	5.5	14.5	10.0	1.8	3451	chrX	3726763	intron	tlk +	chrX	3728488	intron	tlk +	chrX	3730214	intron	tlk +	chrX_20_3725001	chrX_3725001	RAL-821_100b
4168	chrX	3752388	3752395	chrX	3764762	3764769	17.6	4	12374	34.0	22.5	28.2	0.1	12381	chrX	3752388	intron	tlk +	chrX	3758578	intron	tlk +	chrX	3764769	intron	tlk +	chrX_4_3755001	chrX_3755001	RAL-821_100b
4172	chrX	3986844	3986880	chrX	3994497	3994521	412	25	7654	13.0	1.5	7.2	3.0	7677	chrX	3986844	intergenic	not near genes	chrX	3990682	intergenic	not near genes	chrX	3994521	intergenic	not near genes	chrX_25_3990001	chrX_3990001	RAL-821_100b
4177	chrX	4157874	4157923	chrX	4164952	4164970	297	19	7072	11.5	4.5	8.0	2.1	7096	chrX	4157874	intron	Fas2 -	chrX	4161422	intron	Fas2 -	chrX	4164970	intron	Fas2 -	chrX_19_4160001	chrX_4160001	RAL-821_100b
4190	chrX	4700374	4700392	chrX	4700742	4700760	jockey	8	366	19.0	11.5	15.2	0.5	386	chrX	4700374	3` UTR	ctp +	chrX	4700567	3` UTR	ctp +	chrX	4700760	3` UTR	ctp +	chrX_8_4700001	chrX_4700001	RAL-821_100b
4191	chrX	4700393	4700425	chrX	4700741	4700793	jockey	21	364	8.5	11.5	10.0	1.9	400	chrX	4700393	3` UTR	ctp +	chrX	4700593	3` UTR	ctp +	chrX	4700793	3` UTR	ctp +	chrX_21_4700001	chrX_4700001	RAL-821_100b
4193	chrX	4731794	4731813	chrX	4736912	4736916	jockey	13	5116	25.5	15.0	20.2	0.6	5122	chrX	4731794	intergenic	not near genes	chrX	4734355	intergenic	not near genes	chrX	4736916	intergenic	not near genes	chrX_13_4730001	chrX_4730001	RAL-821_100b
4194	chrX	4763236	4763243	chrX	4763743	4763755	Stalker4	7	511	24.5	10.5	17.5	0.4	519	chrX	4763236	intergenic	not near genes	chrX	4763496	intergenic	not near genes	chrX	4763755	intergenic	not near genes	chrX_7_4760001	chrX_4760001	RAL-821_100b
4195	chrX	4763245	4763282	chrX	4763741	4763779	Stalker4	20	507	12.0	9.5	10.8	1.7	534	chrX	4763245	intergenic	not near genes	chrX	4763512	intergenic	not near genes	chrX	4763779	intergenic	not near genes	chrX_20_4760001	chrX_4760001	RAL-821_100b
4197	chrX	4792355	4792401	chrX	4792813	4792848	jockey	20	454	12.0	11.0	11.5	1.6	493	chrX	4792355	intergenic	not near genes	chrX	4792602	intergenic	not near genes	chrX	4792848	intergenic	not near genes	chrX_20_4790001	chrX_4790001	RAL-821_100b
4198	chrX	1562990	1562991	chrX	4805477	4805477	opus	4	3242486	60.5	37.0	48.8	0.1	3242487	chrX	1562990	intron	Mur2B -	chrX	3184234	intron	dnc +	chrX	4805477	3` UTR	CR45516 -	chrX_4_3180001	chrX_3180001	RAL-821_100b
4199	chrX	4827950	4827982	chrX	4835346	4835378	Stalker4	13	7396	14.0	12.0	13.0	0.9	7428	chrX	4827950	intergenic	not near genes	chrX	4831664	intergenic	not near genes	chrX	4835378	intergenic	not near genes	chrX_13_4830001	chrX_4830001	RAL-821_100b
4200	chrX	4827988	4827991	chrX	4835338	4835376	Stalker4	11	7370	10.5	10.5	10.5	1.0	7388	chrX	4827988	intergenic	not near genes	chrX	4831682	intergenic	not near genes	chrX	4835376	intergenic	not near genes	chrX_11_4830001	chrX_4830001	RAL-821_100b
4201	chrX	4827992	4828001	chrX	4835337	4835348	Stalker4	8	7372	9.5	10.5	10.0	0.7	7356	chrX	4827992	intergenic	not near genes	chrX	4831670	intergenic	not near genes	chrX	4835348	intergenic	not near genes	chrX_8_4830001	chrX_4830001	RAL-821_100b
4206	chrX	5096261	5096305	chrX	5103841	5103865	springer	24	7582	9.0	11.0	10.0	2.2	7604	chrX	5096261	intron,intron	CG15465 +,rg +	chrX	5100063	intron,intron	CG15465 +,rg +	chrX	5103865	intron,intron	CG15465 +,rg +	chrX_24_5100001	chrX_5100001	RAL-821_100b
4216	chrX	5338688	5338716	chrX	5339966	5339994	jockey	12	1278	11.0	5.5	8.2	1.3	1306	chrX	5338688	intergenic	not near genes	chrX	5339341	intergenic	not near genes	chrX	5339994	intergenic	SK +	chrX_12_5335001	chrX_5335001	RAL-821_100b
4219	chrX	5524816	5524859	chrX	5528704	5528740	412	22	3886	15.0	6.0	10.5	1.9	3924	chrX	5524816	intergenic	snoRNA:Psi28S-3342 -	chrX	5526778	intergenic	not near genes	chrX	5528740	intergenic	Vsx2 -	chrX_22_5525001	chrX_5525001	RAL-821_100b
4222	chrX	5727399	5727416	chrX	5732163	5732180	Doc	8	4761	10.0	10.0	10.0	0.7	4781	chrX	5727399	intron	CG32758 -	chrX	5729790	intron	CG32758 -	chrX	5732180	intron	CG32758 -	chrX_8_5725001	chrX_5725001	RAL-821_100b
4226	chrX	5883783	5883837	chrX	5884049	5884082	pogo	23	264	5.0	8.0	6.5	3.1	299	chrX	5883783	intron	CR45668 -	chrX	5883932	intron	CR45668 -	chrX	5884082	intron	CR45668 -	chrX_23_5880001	chrX_5880001	RAL-821_100b
4227	chrX	5884150	5884161	chrX	5884404	5884421	pogo	7	263	18.0	1.0	9.5	0.7	271	chrX	5884150	intron	CR45668 -	chrX	5884286	intron	CR45668 -	chrX	5884421	intron	CR45668 -	chrX_7_5880001	chrX_5880001	RAL-821_100b
4228	chrX	5884162	5884184	chrX	5884403	5884413	pogo	13	254	12.0	1.0	6.5	1.7	251	chrX	5884162	intron	CR45668 -	chrX	5884288	intron	CR45668 -	chrX	5884413	intron	CR45668 -	chrX_13_5880001	chrX_5880001	RAL-821_100b
4237	chrX	6171579	6171589	chrX	6179022	6179046	Quasimodo	8	7454	18.0	9.5	13.8	0.5	7467	chrX	6171579	intron	Ca-alpha1T -	chrX	6175312	intron	Ca-alpha1T -	chrX	6179046	intron	Ca-alpha1T -	chrX_8_6175001	chrX_6175001	RAL-821_100b
4238	chrX	6171594	6171613	chrX	6179016	6179071	Quasimodo	19	7448	11.0	8.0	9.5	1.8	7477	chrX	6171594	intron	Ca-alpha1T -	chrX	6175332	intron	Ca-alpha1T -	chrX	6179071	intron	Ca-alpha1T -	chrX_19_6175001	chrX_6175001	RAL-821_100b
4243	chrX	6335216	6335243	chrX	6337727	6337778	Tirant	21	2531	0.5	9.5	5.0	3.5	2562	chrX	6335216	intergenic	not near genes	chrX	6336497	intergenic	not near genes	chrX	6337778	5` UTR	CG3842 +	chrX_21_6335001	chrX_6335001	RAL-821_100b
4245	chrX	6392848	6392885	chrX	6397638	6397669	Doc	19	4788	13.5	0.5	7.0	2.4	4821	chrX	6392848	intergenic	not near genes	chrX	6395258	intergenic	not near genes	chrX	6397669	intergenic	not near genes	chrX_19_6395001	chrX_6395001	RAL-821_100b
4246	chrX	6445324	6445335	chrX	6451099	6451118	297	9	5781	10.0	17.0	13.5	0.6	5794	chrX	6445324	intron	CG42340 -	chrX	6448221	intron	CG42340 -	chrX	6451118	intron	CG42340 -	chrX_9_6445001	chrX_6445001	RAL-821_100b
4248	chrX	6562797	6562819	chrX	6571304	6571326	Tirant	17	8505	25.5	11.0	18.2	0.9	8529	chrX	6562797	intron	CG34417 +	chrX	6567062	intron	CG34417 +	chrX	6571326	intron	CG34417 +	chrX_17_6565001	chrX_6565001	RAL-821_100b
4249	chrX	6562821	6562844	chrX	6571303	6571340	Tirant	20	8504	16.0	10.5	13.2	1.4	8519	chrX	6562821	intron	CG34417 +	chrX	6567080	intron	CG34417 +	chrX	6571340	intron	CG34417 +	chrX_20_6565001	chrX_6565001	RAL-821_100b
4265	chrX	7023576	7023630	chrX	7030991	7031045	Tabor	39	7412	15.5	9.5	12.5	2.9	7469	chrX	7023576	intron	CG12541 -	chrX	7027310	intron	CG12541 -	chrX	7031045	intron	CG12541 -	chrX_39_7025001	chrX_7025001	RAL-821_100b
4269	chrX	7125222	7125274	chrX	7134405	7134458	roo	18	9183	4.0	9.5	6.8	2.3	9236	chrX	7125222	intergenic	not near genes	chrX	7129840	intergenic	not near genes	chrX	7134458	intergenic	not near genes	chrX_18_7125001	chrX_7125001	RAL-821_100b
4276	chrX	7702885	7702934	chrX	7703344	7703361	jockey	37	461	15.0	10.0	12.5	2.7	476	chrX	7702885	intron	CHES-1-like -	chrX	7703123	intron	CHES-1-like -	chrX	7703361	intron	CHES-1-like -	chrX_37_7700001	chrX_7700001	RAL-821_100b
4286	chrX	8031403	8031451	chrX	8035737	8035785	Juan	17	4333	15.5	8.0	11.8	1.3	4382	chrX	8031403	intergenic	not near genes	chrX	8033594	intergenic	not near genes	chrX	8035785	3` UTR	CG2233 -	chrX_17_8030001	chrX_8030001	RAL-821_100b
4288	chrX	8364827	8364878	chrX	8365249	8365312	BS	24	432	7.5	0.5	4.0	4.8	485	chrX	8364827	intron	nAChRalpha3 -	chrX	8365070	intron	nAChRalpha3 -	chrX	8365312	intron	nAChRalpha3 -	chrX_24_8365001	chrX_8365001	RAL-821_100b
4299	chrX	8922306	8922357	chrX	8922765	8922806	jockey	32	454	7.0	11.5	9.2	3.1	500	chrX	8922306	intron	rdgA +	chrX	8922556	intron	rdgA +	chrX	8922806	intron	rdgA +	chrX_32_8920001	chrX_8920001	RAL-821_100b
4300	chrX	8948734	8948788	chrX	8956269	8956323	roo	27	7534	5.0	6.0	5.5	4.2	7589	chrX	8948734	intron	rdgA +	chrX	8952528	intron	rdgA +	chrX	8956323	intron	rdgA +	chrX_27_8950001	chrX_8950001	RAL-821_100b
4311	chrX	9508114	9508121	chrX	9509657	9509664	jockey	7	1543	31.5	14.0	22.8	0.3	1550	chrX	9508114	intron	CG32700 -	chrX	9508889	intron	CG32700 -	chrX	9509664	intron	CG32700 -	chrX_7_9505001	chrX_9505001	RAL-821_100b
4312	chrX	9508123	9508164	chrX	9509656	9509674	jockey	35	1540	11.5	13.0	12.2	2.7	1551	chrX	9508123	intron	CG32700 -	chrX	9508898	intron	CG32700 -	chrX	9509674	intron	CG32700 -	chrX_35_9505001	chrX_9505001	RAL-821_100b
4314	chrX	9575769	9575787	chrX	9576118	9576131	mdg3	10	344	38.5	14.5	26.5	0.4	362	chrX	9575769	intron,exon	CG32699 -,CG42395 -	chrX	9575950	intron,intron	CG32699 -,CG42395 -	chrX	9576131	intron,exon	CG32699 -,CG42395 -	chrX_10_9575001	chrX_9575001	RAL-821_100b
4315	chrX	9575791	9575801	chrX	9576115	9576150	mdg3	7	337	30.0	13.5	21.8	0.3	359	chrX	9575791	intron,exon	CG32699 -,CG42395 -	chrX	9575970	intron,intron	CG32699 -,CG42395 -	chrX	9576150	intron,5` UTR	CG32699 -,CG42395 -	chrX_7_9575001	chrX_9575001	RAL-821_100b
4316	chrX	9575803	9575822	chrX	9576113	9576156	mdg3	13	340	21.5	13.0	17.2	0.7	353	chrX	9575803	intron,exon	CG32699 -,CG42395 -	chrX	9575980	intron,intron	CG32699 -,CG42395 -	chrX	9576156	intron,5` UTR	CG32699 -,CG42395 -	chrX_13_9575001	chrX_9575001	RAL-821_100b
4324	chrX	10138194	10138248	chrX	10145719	10145777	412	34	7528	7.0	11.0	9.0	3.4	7583	chrX	10138194	intron,intron	RhoU +,CR44894 -	chrX	10141986	intron,intron	RhoU +,CR44894 -	chrX	10145777	intron,intron	RhoU +,CR44894 -	chrX_34_10140001	chrX_10140001	RAL-821_100b
4327	chrX	10267297	10267325	chrX	10276472	10276500	roo	5	9175	0.5	5.5	3.0	1.2	9203	chrX	10267297	3` UTR	alpha-Man-I -	chrX	10271898	intron	alpha-Man-I -	chrX	10276500	3` UTR	alpha-Man-I -	chrX_5_10270001	chrX_10270001	RAL-821_100b
4331	chrX	10348783	10348832	chrX	10356367	10356377	springer	14	7576	9.5	7.5	8.5	1.5	7594	chrX	10348783	intergenic	snoRNA:U3:9B +	chrX	10352580	intergenic	not near genes	chrX	10356377	intergenic	l(1)G0289 -	chrX_14_10350001	chrX_10350001	RAL-821_100b
4334	chrX	10525043	10525076	chrX	10532138	10532165	297	23	7090	16.0	12.0	14.0	1.5	7122	chrX	10525043	intron	spri -	chrX	10528604	intron	spri -	chrX	10532165	intron	spri -	chrX_23_10525001	chrX_10525001	RAL-821_100b
4336	chrX	10550831	10550889	chrX	10552323	10552357	hobo	24	1489	10.0	7.0	8.5	2.5	1526	chrX	10550831	intron	spri -	chrX	10551594	intron	spri -	chrX	10552357	intron	spri -	chrX_24_10550001	chrX_10550001	RAL-821_100b
4338	chrX	10686029	10686079	chrX	10691191	10691241	roo	23	5162	11.5	7.5	9.5	2.2	5212	chrX	10686029	intron	X11Lbeta +	chrX	10688635	intron	X11Lbeta +	chrX	10691241	intron	X11Lbeta +	chrX_23_10685001	chrX_10685001	RAL-821_100b
4340	chrX	10772649	10772697	chrX	10772757	10772794	Tirant	34	104	15.0	6.5	10.8	2.9	145	chrX	10772649	intron	CG15211 +	chrX	10772722	intron	CG15211 +	chrX	10772794	intron	CG15211 +	chrX_34_10770001	chrX_10770001	RAL-821_100b
4343	chrX	11095981	11095994	chrX	11103108	11103120	HMS-Beagle	7	7127	10.0	12.5	11.2	0.6	7139	chrX	11095981	intergenic	not near genes	chrX	11099550	intergenic	not near genes	chrX	11103120	intron	CG42249 +	chrX_7_11095001	chrX_11095001	RAL-821_100b
4344	chrX	11095996	11096023	chrX	11103103	11103150	HMS-Beagle	9	7125	8.5	11.5	10.0	0.8	7154	chrX	11095996	intergenic	not near genes	chrX	11099573	intergenic	not near genes	chrX	11103150	intron	CG42249 +	chrX_9_11095001	chrX_11095001	RAL-821_100b
4349	chrX	11184226	11184280	chrX	11189330	11189381	flea	11	5099	12.5	13.5	13.0	0.8	5155	chrX	11184226	intergenic	not near genes	chrX	11186804	intergenic	not near genes	chrX	11189381	intergenic	not near genes	chrX_11_11185001	chrX_11185001	RAL-821_100b
4352	chrX	11312032	11312091	chrX	11319410	11319451	Stalker2	27	7368	5.5	11.0	8.2	2.9	7419	chrX	11312032	intergenic	not near genes	chrX	11315742	intergenic	not near genes	chrX	11319451	intergenic	not near genes	chrX_27_11315001	chrX_11315001	RAL-821_100b
4354	chrX	11535026	11535043	chrX	11541512	11541538	Burdock	12	6494	21.5	9.0	15.2	0.7	6512	chrX	11535026	intron	Drak +	chrX	11538282	intron	Drak +	chrX	11541538	intron	Drak +	chrX_12_11535001	chrX_11535001	RAL-821_100b
4355	chrX	11633392	11633445	chrX	11640471	11640524	297	37	7078	17.5	10.0	13.8	2.5	7132	chrX	11633392	intron	Ptp10D +	chrX	11636958	intron	Ptp10D +	chrX	11640524	intron	Ptp10D +	chrX_37_11635001	chrX_11635001	RAL-821_100b
4356	chrX	11645086	11645134	chrX	11648280	11648329	NOF	12	3194	12.5	5.0	8.8	1.2	3243	chrX	11645086	intron	Ptp10D +	chrX	11646708	intron	Ptp10D +	chrX	11648329	intron	Ptp10D +	chrX_12_11645001	chrX_11645001	RAL-821_100b
4365	chrX	12168114	12168165	chrX	12173581	12173610	I-element	26	5464	9.5	10.5	10.0	2.4	5496	chrX	12168114	intron	Ten-a +	chrX	12170862	intron	Ten-a +	chrX	12173610	intron	Ten-a +	chrX_26_12170001	chrX_12170001	RAL-821_100b
4374	chrX	12381902	12381903	chrX	12385773	12385810	flea	8	3884	10.5	14.5	12.5	0.6	3908	chrX	12381902	intergenic	not near genes	chrX	12383856	intergenic	not near genes	chrX	12385810	intergenic	not near genes	chrX_8_12380001	chrX_12380001	RAL-821_100b
4381	chrX	9845361	9845361	chrX	12546496	12546496	gypsy5	5	2701135	47.0	44.0	45.5	0.1	2701135	chrX	9845361	intron	CG32698 +	chrX	11195928	intergenic	not near genes	chrX	12546496	intron	CG43921 -	chrX_5_11195001	chrX_11195001	RAL-821_100b
4390	chrX	12930573	12930605	chrX	12937713	12937746	HMS-Beagle	13	7140	6.0	15.0	10.5	1.1	7173	chrX	12930573	intron	fne +	chrX	12934160	intron	fne +	chrX	12937746	intron	fne +	chrX_13_12930001	chrX_12930001	RAL-821_100b
4405	chrX	13401463	13401517	chrX	13401840	13401894	jockey	11	375	4.5	8.5	6.5	1.5	431	chrX	13401463	intergenic	CG1673 +,CG12725 -	chrX	13401678	intergenic	CG12725 -,CG1673 +	chrX	13401894	3` UTR	CG12725 -	chrX_11_13400001	chrX_13400001	RAL-821_100b
4406	chrX	13402995	13403041	chrX	13403147	13403193	X-element	24	151	4.0	6.5	5.2	3.9	198	chrX	13402995	intergenic	CG12725 -	chrX	13403094	intergenic	CG12725 -	chrX	13403193	intergenic	CG12725 -	chrX_24_13400001	chrX_13400001	RAL-821_100b
4407	chrX	13429443	13429492	chrX	13430614	13430636	jockey	25	1168	7.5	10.0	8.8	2.6	1193	chrX	13429443	intergenic	not near genes	chrX	13430040	intergenic	not near genes	chrX	13430636	intergenic	not near genes	chrX_25_13430001	chrX_13430001	RAL-821_100b
4410	chrX	13463620	13463676	chrX	13469222	13469278	mdg3	21	5601	6.0	6.5	6.2	2.9	5658	chrX	13463620	intron	Neto +	chrX	13466449	intron	Neto +	chrX	13469278	intron	Neto +	chrX_21_13465001	chrX_13465001	RAL-821_100b
4417	chrX	13937947	13938009	chrX	13941252	13941305	I-element	9	3297	1.5	1.0	1.2	4.1	3358	chrX	13937947	intron	mamo -	chrX	13939626	intron	mamo -	chrX	13941305	intron	mamo -	chrX_9_13935001	chrX_13935001	RAL-821_100b
4418	chrX	14030778	14030782	chrX	14035340	14035372	copia	4	4582	5.0	16.5	10.8	0.3	4594	chrX	14030778	intergenic	not near genes	chrX	14033075	intergenic	not near genes	chrX	14035372	intergenic	not near genes	chrX_4_14030001	chrX_14030001	RAL-821_100b
4419	chrX	14104999	14105005	chrX	14114175	14114181	roo	4	9176	31.5	9.5	20.5	0.2	9182	chrX	14104999	intergenic	not near genes	chrX	14109590	intergenic	not near genes	chrX	14114181	5` UTR	CR44657 +	chrX_4_14105001	chrX_14105001	RAL-821_100b
4420	chrX	14105006	14105054	chrX	14114172	14114230	roo	36	9171	8.5	9.0	8.8	3.7	9224	chrX	14105006	intergenic	not near genes	chrX	14109618	intergenic	not near genes	chrX	14114230	5` UTR	CR44657 +	chrX_36_14105001	chrX_14105001	RAL-821_100b
4423	chrX	14157576	14157591	chrX	14163258	14163273	297	8	5679	13.5	7.5	10.5	0.7	5697	chrX	14157576	intergenic	not near genes	chrX	14160424	intergenic	not near genes	chrX	14163273	intergenic	not near genes	chrX_8_14160001	chrX_14160001	RAL-821_100b
4434	chrX	14416285	14416320	chrX	14421078	14421111	F-element	7	4793	9.0	8.5	8.8	0.7	4826	chrX	14416285	intron	dpr8 +	chrX	14418698	intron	dpr8 +	chrX	14421111	intron	dpr8 +	chrX_7_14415001	chrX_14415001	RAL-821_100b
4438	chrX	14589685	14589708	chrX	14589941	14589955	pogo	5	257	9.0	2.5	5.8	0.7	270	chrX	14589685	intron	CG9413 -	chrX	14589820	intron	CG9413 -	chrX	14589955	intron	CG9413 -	chrX_5_14585001	chrX_14585001	RAL-821_100b
4440	chrX	14636442	14636491	chrX	14641908	14641947	I-element	27	5464	12.5	11.5	12.0	2.1	5505	chrX	14636442	intron	NetA -	chrX	14639194	intron	NetA -	chrX	14641947	intron	NetA -	chrX_27_14635001	chrX_14635001	RAL-821_100b
4445	chrX	14778012	14778038	chrX	14782834	14782860	Doc	13	4821	20.5	15.5	18.0	0.7	4848	chrX	14778012	intergenic	CG5347 +	chrX	14780436	intergenic	not near genes	chrX	14782860	intergenic	Ag5r2 -	chrX_13_14780001	chrX_14780001	RAL-821_100b
4446	chrX	14778043	14778053	chrX	14782829	14782875	Doc	8	4818	17.0	14.5	15.8	0.5	4832	chrX	14778043	intergenic	CG5347 +	chrX	14780459	intergenic	not near genes	chrX	14782875	intergenic	Ag5r2 -	chrX_8_14780001	chrX_14780001	RAL-821_100b
4451	chrX	14818744	14818797	chrX	14823967	14823986	copia	18	5218	7.0	9.5	8.2	2.0	5242	chrX	14818744	intron	rut -	chrX	14821365	intron	rut -	chrX	14823986	intron	rut -	chrX_18_14820001	chrX_14820001	RAL-821_100b
4452	chrX	14936838	14936892	chrX	14946120	14946161	roo	25	9281	7.0	6.5	6.8	3.2	9323	chrX	14936838	intron	pdgy -	chrX	14941500	intron	pdgy -	chrX	14946161	intron	pdgy -	chrX_25_14940001	chrX_14940001	RAL-821_100b
4461	chrX	15273686	15273701	chrX	15274878	15274893	1360	12	1188	30.0	13.0	21.5	0.5	1207	chrX	15273686	intergenic	not near genes	chrX	15274290	intergenic	not near genes	chrX	15274893	intergenic	not near genes	chrX_12_15270001	chrX_15270001	RAL-821_100b
4462	chrX	15273702	15273739	chrX	15274871	15274896	1360	24	1181	15.0	11.5	13.2	1.7	1194	chrX	15273702	intergenic	not near genes	chrX	15274299	intergenic	not near genes	chrX	15274896	intergenic	not near genes	chrX_24_15270001	chrX_15270001	RAL-821_100b
4465	chrX	15326709	15326715	chrX	15326932	15326938	I-element	7	223	1.0	8.0	4.5	1.3	229	chrX	15326709	3` UTR	Top1 +	chrX	15326824	3` UTR	Top1 +	chrX	15326938	3` UTR	Top1 +	chrX_7_15325001	chrX_15325001	RAL-821_100b
4466	chrX	15413033	15413041	chrX	15417360	15417368	Juan	4	4327	25.0	7.5	16.2	0.2	4335	chrX	15413033	intron	Cngl -	chrX	15415200	intron	Cngl -	chrX	15417368	intron	Cngl -	chrX_4_15415001	chrX_15415001	RAL-821_100b
4467	chrX	15413042	15413079	chrX	15417357	15417406	Juan	19	4322	15.0	6.0	10.5	1.7	4364	chrX	15413042	intron	Cngl -	chrX	15415224	intron	Cngl -	chrX	15417406	intron	Cngl -	chrX_19_15415001	chrX_15415001	RAL-821_100b
4468	chrX	15435687	15435704	chrX	15436108	15436162	rover	25	450	0.5	18.5	9.5	2.4	475	chrX	15435687	intron	Cngl -	chrX	15435924	intron	Cngl -	chrX	15436162	intron	Cngl -	chrX_25_15435001	chrX_15435001	RAL-821_100b
4479	chrX	16222752	16222805	chrX	16231127	16231180	roo	23	8374	5.5	7.5	6.5	3.1	8428	chrX	16222752	intergenic	not near genes	chrX	16226966	intergenic	not near genes	chrX	16231180	intergenic	not near genes	chrX_23_16225001	chrX_16225001	RAL-821_100b
4484	chrX	16340657	16340698	chrX	16349826	16349880	roo	5	9179	0.0	7.5	3.8	1.0	9223	chrX	16340657	intergenic	Dsp1 +	chrX	16345268	intergenic	not near genes	chrX	16349880	intergenic	sl +	chrX_5_16345001	chrX_16345001	RAL-821_100b
4488	chrX	16492623	16492675	chrX	16498225	16498277	mdg3	36	5601	10.0	11.5	10.8	3.1	5654	chrX	16492623	intron	para -	chrX	16495450	intron	para -	chrX	16498277	exon	para -	chrX_36_16495001	chrX_16495001	RAL-821_100b
4498	chrX	16935986	16936032	chrX	16936429	16936464	jockey	27	439	13.0	11.5	12.2	2.0	478	chrX	16935986	intron	CG4928 +	chrX	16936225	intron	CG4928 +	chrX	16936464	intron	CG4928 +	chrX_27_16935001	chrX_16935001	RAL-821_100b
4502	chrX	17057910	17057961	chrX	17058176	17058218	pogo	20	264	5.0	6.0	5.5	3.1	308	chrX	17057910	intron	CG45002 -	chrX	17058064	intron	CG45002 -	chrX	17058218	intron	CG45002 -	chrX_20_17055001	chrX_17055001	RAL-821_100b
4505	chrX	17195181	17195228	chrX	17200291	17200339	flea	17	5108	8.5	8.5	8.5	1.8	5158	chrX	17195181	3` UTR	baz +	chrX	17197760	3` UTR	baz +	chrX	17200339	3` UTR	baz +	chrX_17_17195001	chrX_17195001	RAL-821_100b
4514	chrX	17431338	17431341	chrX	17431699	17431707	jockey	7	364	31.5	11.0	21.2	0.3	369	chrX	17431338	intron	CG12994 -	chrX	17431522	intron	CG12994 -	chrX	17431707	intron	CG12994 -	chrX_7_17430001	chrX_17430001	RAL-821_100b
4518	chrX	17556931	17556937	chrX	17557440	17557456	mdg1	4	512	21.0	8.5	14.8	0.3	525	chrX	17556931	intron	CG43658 -	chrX	17557194	intron	CG43658 -	chrX	17557456	intron	CG43658 -	chrX_4_17555001	chrX_17555001	RAL-821_100b
4521	chrX	17792938	17792981	chrX	17796259	17796292	flea	17	3318	8.0	9.0	8.5	1.8	3354	chrX	17792938	intron	OdsH +	chrX	17794615	intron	OdsH +	chrX	17796292	intron	OdsH +	chrX_17_17790001	chrX_17790001	RAL-821_100b
4529	chrX	18194042	18194067	chrX	18194602	18194602	BS	11	556	19.0	9.0	14.0	0.7	560	chrX	18194042	intron	Frq2 +	chrX	18194322	intron	Frq2 +	chrX	18194602	intron	Frq2 +	chrX_11_18190001	chrX_18190001	RAL-821_100b
4530	chrX	18194069	18194099	chrX	18194599	18194659	BS	22	555	10.5	8.5	9.5	2.1	590	chrX	18194069	intron	Frq2 +	chrX	18194364	intron	Frq2 +	chrX	18194659	intron	Frq2 +	chrX_22_18190001	chrX_18190001	RAL-821_100b
4536	chrX	18429470	18429519	chrX	18434806	18434855	Transpac	27	5334	10.0	11.0	10.5	2.3	5385	chrX	18429470	intergenic	not near genes	chrX	18432162	intergenic	not near genes	chrX	18434855	intergenic	not near genes	chrX_27_18430001	chrX_18430001	RAL-821_100b
4551	chrX	18957047	18957094	chrX	18965730	18965780	roo	25	8684	6.5	7.5	7.0	3.1	8733	chrX	18957047	intron	CG43759 +	chrX	18961414	intron	CG43759 +	chrX	18965780	intron	CG43759 +	chrX_25_18960001	chrX_18960001	RAL-821_100b
4554	chrX	19060387	19060435	chrX	19065195	19065243	Doc	20	4807	9.0	10.0	9.5	1.9	4856	chrX	19060387	intron	CG14190 +	chrX	19062815	intron	CG14190 +	chrX	19065243	intron	CG14190 +	chrX_20_19060001	chrX_19060001	RAL-821_100b
4562	chrX	19136528	19136583	chrX	19143473	19143527	412	24	6939	8.0	1.5	4.8	4.1	6999	chrX	19136528	intergenic	not near genes	chrX	19140028	intergenic	not near genes	chrX	19143527	3` UTR	RhoGAP18B -	chrX_24_19140001	chrX_19140001	RAL-821_100b
4565	chrX	19356969	19357021	chrX	19358429	19358505	NOF	20	1470	7.0	0.0	3.5	4.4	1536	chrX	19356969	intron	kek5 +	chrX	19357737	intron	kek5 +	chrX	19358505	intron	kek5 +	chrX_20_19355001	chrX_19355001	RAL-821_100b
4566	chrX	19380137	19380162	chrX	19380403	19380428	pogo	14	264	24.5	12.5	18.5	0.7	291	chrX	19380137	intron	kek5 +	chrX	19380282	intron	kek5 +	chrX	19380428	intron	kek5 +	chrX_14_19380001	chrX_19380001	RAL-821_100b
4567	chrX	19380164	19380185	chrX	19380399	19380451	pogo	10	262	18.0	12.0	15.0	0.6	287	chrX	19380164	intron	kek5 +	chrX	19380308	intron	kek5 +	chrX	19380451	intron	kek5 +	chrX_10_19380001	chrX_19380001	RAL-821_100b
4571	chrX	19472103	19472116	chrX	19472698	19472711	jockey	6	595	22.5	11.5	17.0	0.3	608	chrX	19472103	intergenic	kek5 +	chrX	19472407	intergenic	kek5 +	chrX	19472711	intergenic	not near genes	chrX_6_19470001	chrX_19470001	RAL-821_100b
4572	chrX	19472121	19472136	chrX	19472695	19472731	jockey	7	590	16.5	11.0	13.8	0.5	610	chrX	19472121	intergenic	kek5 +	chrX	19472426	intergenic	not near genes	chrX	19472731	intergenic	not near genes	chrX_7_19470001	chrX_19470001	RAL-821_100b
4573	chrX	19472139	19472158	chrX	19472691	19472728	jockey	25	576	5.5	10.0	7.8	2.8	589	chrX	19472139	intergenic	kek5 +	chrX	19472434	intergenic	not near genes	chrX	19472728	intergenic	not near genes	chrX_25_19470001	chrX_19470001	RAL-821_100b
4578	chrX	19710049	19710103	chrX	19711860	19711884	S-element	41	1807	11.0	16.0	13.5	2.8	1835	chrX	19710049	intron	meso18E -	chrX	19710966	intron	meso18E -	chrX	19711884	intron	meso18E -	chrX_41_19710001	chrX_19710001	RAL-821_100b
4580	chrX	19797325	19797336	chrX	19804663	19804674	Stalker4	11	7337	21.0	9.0	15.0	0.7	7349	chrX	19797325	intergenic	not near genes	chrX	19801000	intergenic	not near genes	chrX	19804674	intergenic	not near genes	chrX_11_19800001	chrX_19800001	RAL-821_100b
4604	chrX	20377327	20377347	chrX	20378798	20378802	hobo	20	1486	12.0	23.0	17.5	1.1	1475	chrX	20377327	intergenic	not near genes	chrX	20378064	intergenic	not near genes	chrX	20378802	intergenic	not near genes	chrX_20_20375001	chrX_20375001	RAL-821_100b
4622	chrX	20836707	20836759	chrX	20844334	20844386	roo	30	7626	6.5	7.5	7.0	3.8	7679	chrX	20836707	intron	shakB -	chrX	20840546	intron	shakB -	chrX	20844386	intron	shakB -	chrX_30_20840001	chrX_20840001	RAL-821_100b
4624	chrX	20940699	20940752	chrX	20942193	20942211	hobo	26	1489	5.5	11.0	8.2	2.8	1512	chrX	20940699	intergenic	not near genes	chrX	20941455	intergenic	not near genes	chrX	20942211	intergenic	not near genes	chrX_26_20940001	chrX_20940001	RAL-821_100b
4625	chrX	20956947	20957013	chrX	20962417	20962480	I-element	5	5468	0.0	5.5	2.8	1.3	5533	chrX	20956947	intergenic	not near genes	chrX	20959714	intergenic	not near genes	chrX	20962480	intergenic	Ser6 -	chrX_5_20955001	chrX_20955001	RAL-821_100b
4628	chrX	21032262	21032268	chrX	21035258	21035264	Rt1b	5	2996	9.5	43.0	26.2	0.2	3002	chrX	21032262	intergenic	CG1529 -	chrX	21033763	intergenic	not near genes	chrX	21035264	intergenic	Ntf-2 +	chrX_5_21030001	chrX_21030001	RAL-821_100b
4634	chrX	21061870	21061897	chrX	21062364	21062406	roo	10	508	4.5	12.0	8.2	1.1	536	chrX	21061870	intron	bves +	chrX	21062138	intron	bves +	chrX	21062406	intron,3` UTR	bves +,CG32512 -	chrX_10_21060001	chrX_21060001	RAL-821_100b
4639	chrX	21086111	21086154	chrX	21087165	21087205	jockey	23	1050	10.5	12.5	11.5	1.8	1094	chrX	21086111	intergenic	not near genes	chrX	21086658	intergenic	not near genes	chrX	21087205	intergenic	not near genes	chrX_23_21085001	chrX_21085001	RAL-821_100b
4653	chrX	21458665	21458727	chrX	21464126	21464188	Ivk	38	5460	10.0	8.5	9.2	3.7	5523	chrX	21458665	intergenic	not near genes	chrX	21461426	intergenic	not near genes	chrX	21464188	intergenic	not near genes	chrX_38_21460001	chrX_21460001	RAL-821_100b
4655	chrX	21474394	21474435	chrX	21474781	21474824	1731	21	390	7.0	12.0	9.5	2.0	430	chrX	21474394	intergenic	not near genes	chrX	21474609	intergenic	not near genes	chrX	21474824	intergenic	not near genes	chrX_21_21470001	chrX_21470001	RAL-821_100b
4665	chrX	21595566	21595574	chrX	21598645	21598653	micropia	7	3079	28.5	25.0	26.8	0.3	3087	chrX	21595566	intergenic	not near genes	chrX	21597110	intergenic	not near genes	chrX	21598653	intergenic	not near genes	chrX_7_21595001	chrX_21595001	RAL-821_100b
4669	chrX	22522609	22522614	chrX	22525452	22525459	NOF	6	2844	18.0	0.0	9.0	0.6	2850	chrX	22522609	intron	CG17600 +	chrX	22524034	intron	CG17600 +	chrX	22525459	intron	CG17600 +	chrX_6_22520001	chrX_22520001	RAL-821_100b
4670	chrX	22564562	22564583	chrX	22575109	22575145	jockey	15	10550	33.5	15.5	24.5	0.6	10583	chrX	22564562	intergenic	not near genes	chrX	22569854	intergenic	not near genes	chrX	22575145	intergenic	not near genes	chrX_15_22565001	chrX_22565001	RAL-821_100b
4676	chrX	22697481	22697512	chrX	22701803	22701834	Juan	22	4321	21.0	13.0	17.0	1.2	4353	chrX	22697481	intron	CR44997 +	chrX	22699658	intron	CR44997 +	chrX	22701834	intron	CR44997 +	chrX_22_22695001	chrX_22695001	RAL-821_100b
4678	chrX	22771488	22771533	chrX	22774796	22774800	297	18	3306	5.5	7.0	6.2	2.5	3312	chrX	22771488	intron	CR44997 +	chrX	22773144	intron	CR44997 +	chrX	22774800	intron	CR44997 +	chrX_18_22770001	chrX_22770001	RAL-821_100b
4680	chrX	22811982	22812001	chrX	22816780	22816799	F-element	8	4797	14.0	12.5	13.2	0.6	4817	chrX	22811982	intergenic	CG12446 -	chrX	22814390	intergenic	not near genes	chrX	22816799	intergenic	not near genes	chrX_8_22810001	chrX_22810001	RAL-821_100b
4684	chrX	22987079	22987090	chrX	22989763	22989772	Burdock	7	2683	10.0	10.5	10.2	0.6	2693	chrX	22987079	intron,intron	stnA -,stnB -	chrX	22988426	intron,intron	stnA -,stnB -	chrX	22989772	intron,intron	stnA -,stnB -	chrX_7_22985001	chrX_22985001	RAL-821_100b
4685	chrX	22987092	22987130	chrX	22989761	22989814	Burdock	24	2681	3.5	10.5	7.0	3.0	2722	chrX	22987092	intron,intron	stnA -,stnB -	chrX	22988453	intron,intron	stnA -,stnB -	chrX	22989814	intron,intron	stnA -,stnB -	chrX_24_22985001	chrX_22985001	RAL-821_100b
4686	chrX	22996289	22996334	chrX	23003548	23003592	roo	29	7257	12.5	13.0	12.8	2.1	7303	chrX	22996289	intron,intron	stnA -,stnB -	chrX	22999940	intron,intron	stnA -,stnB -	chrX	23003592	intron,intron	stnA -,stnB -	chrX_29_22995001	chrX_22995001	RAL-821_100b
4692	chrY	1431369	1431373	chrY	1447395	1447434	Doc	4	16052	15.0	19.0	17.0	0.2	16065	chrY	1431369	intergenic	not near genes	chrY	1439402	intergenic	not near genes	chrY	1447434	intergenic	not near genes	chrY_4_1435001	chrY_1435001	RAL-821_100b