SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47464	47488	chr2L	52568	52593	jockey	17	5103	9.5	9.0	9.2	1.7	5129	chr2L	47464	intron	Cda5 -	chr2L	50028	intron	Cda5 -	chr2L	52593	intron	Cda5 -	chr2L_17_50001	chr2L_50001	RAL-812
2	chr2L	45954	45985	chr2L	53388	53419	jockey	4	7434	19.5	13.5	16.5	0.2	7465	chr2L	45954	intron	Cda5 -	chr2L	49686	intron	Cda5 -	chr2L	53419	intron	Cda5 -	chr2L_4_45001	chr2L_45001	RAL-812
10	chr2L	686922	686935	chr2L	695961	695975	roo	8	9039	2.0	4.5	3.2	1.9	9053	chr2L	686922	intron	ds -	chr2L	691448	intron	ds -	chr2L	695975	intron	ds -	chr2L_8_690001	chr2L_690001	RAL-812
12	chr2L	770471	770494	chr2L	772244	772275	Bari1	8	1780	2.0	3.5	2.8	2.1	1804	chr2L	770471	intergenic	not near genes	chr2L	771373	intergenic	not near genes	chr2L	772275	intergenic	CR44614 +	chr2L_8_770001	chr2L_770001	RAL-812
15	chr2L	976880	976910	chr2L	984516	984546	roo	8	7636	2.0	2.0	2.0	2.7	7666	chr2L	976880	intergenic	not near genes	chr2L	980713	intergenic	not near genes	chr2L	984546	intergenic	not near genes	chr2L_8_980001	chr2L_980001	RAL-812
19	chr2L	1220131	1220161	chr2L	1227596	1227627	blood	13	7466	1.5	3.0	2.2	4.1	7496	chr2L	1220131	intron	CG42329 +	chr2L	1223879	intron	CG42329 +	chr2L	1227627	intron	CG42329 +	chr2L_13_1220001	chr2L_1220001	RAL-812
25	chr2L	1570684	1570723	chr2L	1573556	1573592	F-element	16	2872	2.5	2.0	2.2	5.0	2908	chr2L	1570684	intron	haf +	chr2L	1572138	intron	haf +	chr2L	1573592	intron	haf +	chr2L_16_1570001	chr2L_1570001	RAL-812
27	chr2L	1678984	1678999	chr2L	1686449	1686463	blood	4	7463	3.5	4.0	3.8	0.8	7479	chr2L	1678984	intron	chinmo +	chr2L	1682724	intron	chinmo +	chr2L	1686463	intron	chinmo +	chr2L_4_1680001	chr2L_1680001	RAL-812
28	chr2L	1711357	1711367	chr2L	1711680	1711691	mdg3	4	324	6.0	5.0	5.5	0.6	334	chr2L	1711357	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711524	3` UTR	frtz -	chr2L	1711691	3` UTR	frtz -	chr2L_4_1710001	chr2L_1710001	RAL-812
38	chr2L	2100384	2100404	chr2L	2109533	2109540	roo	9	9147	2.0	3.5	2.8	2.4	9156	chr2L	2100384	intron	dpr3 -	chr2L	2104962	intron	dpr3 -	chr2L	2109540	intron	dpr3 -	chr2L_9_2100001	chr2L_2100001	RAL-812
39	chr2L	2112134	2112143	chr2L	2119774	2119791	opus	7	7650	3.5	5.0	4.2	1.3	7657	chr2L	2112134	intergenic	not near genes	chr2L	2115962	intergenic	not near genes	chr2L	2119791	intergenic	not near genes	chr2L_7_2115001	chr2L_2115001	RAL-812
42	chr2L	2294047	2294060	chr2L	2299250	2299265	copia	4	5203	3.5	5.5	4.5	0.7	5218	chr2L	2294047	intergenic	not near genes	chr2L	2296656	intergenic	not near genes	chr2L	2299265	intergenic	not near genes	chr2L_4_2295001	chr2L_2295001	RAL-812
50	chr2L	2661209	2661232	chr2L	2663032	2663070	I-element	5	1828	1.5	2.0	1.8	1.8	1861	chr2L	2661209	intergenic	not near genes	chr2L	2662140	intergenic	not near genes	chr2L	2663070	intergenic	not near genes	chr2L_5_2660001	chr2L_2660001	RAL-812
53	chr2L	2933301	2933324	chr2L	2935477	2935501	pogo	8	2176	4.5	4.0	4.2	1.5	2200	chr2L	2933301	intron	lilli +	chr2L	2934401	intron	lilli +	chr2L	2935501	intron	lilli +	chr2L_8_2930001	chr2L_2930001	RAL-812
55	chr2L	3073030	3073055	chr2L	3078233	3078257	copia	4	5203	3.0	2.0	2.5	1.1	5227	chr2L	3073030	intron	toc -	chr2L	3075644	intron	toc -	chr2L	3078257	intron	toc -	chr2L_4_3075001	chr2L_3075001	RAL-812
59	chr2L	3251498	3251514	chr2L	3259063	3259079	springer	7	7565	7.0	4.5	5.8	1.0	7581	chr2L	3251498	intergenic	not near genes	chr2L	3255288	intergenic	not near genes	chr2L	3259079	intergenic	not near genes	chr2L_7_3255001	chr2L_3255001	RAL-812
65	chr2L	3388607	3388627	chr2L	3388848	3388868	pogo	4	241	1.0	1.0	1.0	2.0	261	chr2L	3388607	intergenic	CG42460 -	chr2L	3388738	intergenic	CG42460 -	chr2L	3388868	intergenic	CG42460 -,CR44791 +	chr2L_4_3385001	chr2L_3385001	RAL-812
81	chr2L	4066045	4066064	chr2L	4068861	4068889	Juan	4	2823	1.0	3.0	2.0	1.3	2844	chr2L	4066045	intron	ed +	chr2L	4067467	intron	ed +	chr2L	4068889	intron	ed +	chr2L_4_4065001	chr2L_4065001	RAL-812
83	chr2L	4181292	4181305	chr2L	4183905	4183937	Burdock	4	2627	3.5	3.5	3.5	0.9	2645	chr2L	4181292	intergenic	not near genes	chr2L	4182614	intergenic	not near genes	chr2L	4183937	intergenic	not near genes	chr2L_4_4180001	chr2L_4180001	RAL-812
89	chr2L	4601702	4601736	chr2L	4609143	4609177	mdg1	16	7441	4.0	5.5	4.8	2.8	7475	chr2L	4601702	intron	dp -	chr2L	4605440	intron	dp -	chr2L	4609177	intron	dp -	chr2L_16_4605001	chr2L_4605001	RAL-812
92	chr2L	4918164	4918188	chr2L	4923237	4923261	jockey	5	5072	1.0	1.0	1.0	2.5	5097	chr2L	4918164	intron	hoe1 -	chr2L	4920712	intron	hoe1 -	chr2L	4923261	intron	hoe1 -	chr2L_5_4920001	chr2L_4920001	RAL-812
105	chr2L	5827727	5827740	chr2L	5836720	5836748	roo	7	9004	6.5	3.5	5.0	1.2	9021	chr2L	5827727	intron	TrissinR +	chr2L	5832238	intron	TrissinR +	chr2L	5836748	intron	TrissinR +	chr2L_7_5830001	chr2L_5830001	RAL-812
112	chr2L	6363151	6363181	chr2L	6366073	6366100	Burdock	8	2921	0.5	3.5	2.0	2.7	2949	chr2L	6363151	intergenic	not near genes	chr2L	6364626	intergenic	not near genes	chr2L	6366100	intergenic	not near genes	chr2L_8_6360001	chr2L_6360001	RAL-812
113	chr2L	6426854	6426885	chr2L	6445114	6445145	roo	13	18260	4.5	3.0	3.8	2.7	18291	chr2L	6426854	3` UTR	CG9527 -	chr2L	6436000	intron	CG9527 -	chr2L	6445145	exon	CG9527 -	chr2L_13_6435001	chr2L_6435001	RAL-812
117	chr2L	6876780	6876809	chr2L	6882971	6883000	diver	6	6190	5.0	5.0	5.0	1.0	6220	chr2L	6876780	intron	Nlg2 +	chr2L	6879890	intron	Nlg2 +	chr2L	6883000	intron	Nlg2 +	chr2L_6_6875001	chr2L_6875001	RAL-812
125	chr2L	7343325	7343354	chr2L	7350440	7350469	roo	7	7116	3.5	3.5	3.5	1.6	7144	chr2L	7343325	intron	Wnt6 +	chr2L	7346897	intron	Wnt6 +	chr2L	7350469	intron	Wnt6 +	chr2L_7_7345001	chr2L_7345001	RAL-812
132	chr2L	7959044	7959065	chr2L	7960454	7960476	pogo	11	1411	3.5	0.0	1.8	3.9	1432	chr2L	7959044	intron	Snoo -	chr2L	7959760	intron	Snoo -	chr2L	7960476	intron	Snoo -	chr2L_11_7955001	chr2L_7955001	RAL-812
133	chr2L	7977090	7977112	chr2L	7984066	7984088	297	4	6975	5.0	3.5	4.2	0.8	6998	chr2L	7977090	intron	Snoo -	chr2L	7980589	intron	Snoo -	chr2L	7984088	intron,5` UTR	Snoo -,CG7231 +	chr2L_4_7980001	chr2L_7980001	RAL-812
134	chr2L	8013619	8013633	chr2L	8018823	8018836	copia	4	5204	5.0	0.0	2.5	1.1	5217	chr2L	8013619	intron	Tg +	chr2L	8016228	intron	Tg +	chr2L	8018836	intron	Tg +	chr2L_4_8015001	chr2L_8015001	RAL-812
137	chr2L	8452423	8452453	chr2L	8461593	8461624	roo	8	9171	0.5	4.0	2.2	2.5	9201	chr2L	8452423	intron	fu12 -	chr2L	8457024	intron	fu12 -	chr2L	8461624	intron	fu12 -	chr2L_8_8455001	chr2L_8455001	RAL-812
142	chr2L	8723116	8723142	chr2L	8731493	8731519	Tirant	8	8377	1.5	4.5	3.0	2.0	8403	chr2L	8723116	intron	raw -	chr2L	8727318	intron	raw -	chr2L	8731519	intron	raw -	chr2L_8_8725001	chr2L_8725001	RAL-812
146	chr2L	9000278	9000300	chr2L	9007787	9007810	roo	7	7510	7.5	2.0	4.8	1.2	7532	chr2L	9000278	intergenic	Try29F +	chr2L	9004044	intergenic	not near genes	chr2L	9007810	intergenic	not near genes	chr2L_7_9000001	chr2L_9000001	RAL-812
151	chr2L	9217980	9217997	chr2L	9222764	9222784	Doc	4	4784	3.5	4.0	3.8	0.8	4804	chr2L	9217980	intron	tai +	chr2L	9220382	intron	tai +	chr2L	9222784	intron	tai +	chr2L_4_9220001	chr2L_9220001	RAL-812
158	chr2L	9393497	9393531	chr2L	9396464	9396498	jockey	9	2967	3.0	4.0	3.5	2.0	3001	chr2L	9393497	intron	Shawl -	chr2L	9394998	intron	Shawl -	chr2L	9396498	intron	Shawl -	chr2L_9_9390001	chr2L_9390001	RAL-812
165	chr2L	9973725	9973759	chr2L	9980844	9980878	HMS-Beagle	18	7116	5.5	5.5	5.5	2.8	7153	chr2L	9973725	intergenic	not near genes	chr2L	9977302	intergenic	not near genes	chr2L	9980878	intergenic	not near genes	chr2L_18_9975001	chr2L_9975001	RAL-812
168	chr2L	10156324	10156352	chr2L	10163793	10163821	blood	11	7468	3.0	3.5	3.2	2.6	7497	chr2L	10156324	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160072	intron	CG44153 -	chr2L	10163821	intron	CG44153 -	chr2L_11_10160001	chr2L_10160001	RAL-812
177	chr2L	10862837	10862873	chr2L	10864451	10864477	Rt1c	9	1606	5.5	4.0	4.8	1.6	1640	chr2L	10862837	3` UTR	CR43807 -	chr2L	10863657	intron	CR43807 -	chr2L	10864477	3` UTR	CR43807 -	chr2L_9_10860001	chr2L_10860001	RAL-812
180	chr2L	10946948	10946974	chr2L	10956163	10956189	roo	11	9214	2.5	5.5	4.0	2.2	9241	chr2L	10946948	intron	dpr2 -	chr2L	10951568	intron	dpr2 -	chr2L	10956189	intron	dpr2 -	chr2L_11_10950001	chr2L_10950001	RAL-812
187	chr2L	11563644	11563670	chr2L	11568848	11568874	copia	7	5204	2.0	2.5	2.2	2.2	5230	chr2L	11563644	intergenic	not near genes	chr2L	11566259	intergenic	not near genes	chr2L	11568874	intergenic	not near genes	chr2L_7_11565001	chr2L_11565001	RAL-812
191	chr2L	11713506	11713531	chr2L	11720974	11720999	blood	10	7466	5.5	2.5	4.0	2.0	7493	chr2L	11713506	intergenic	not near genes	chr2L	11717252	intergenic	not near genes	chr2L	11720999	intergenic	CR44143 +	chr2L_10_11715001	chr2L_11715001	RAL-812
197	chr2L	12067330	12067349	chr2L	12074382	12074401	297	4	7052	0.5	2.0	1.2	1.8	7071	chr2L	12067330	intergenic	not near genes	chr2L	12070866	intergenic	not near genes	chr2L	12074401	intergenic	not near genes	chr2L_4_12070001	chr2L_12070001	RAL-812
208	chr2L	12558329	12558352	chr2L	12565458	12565479	HMS-Beagle	4	7128	0.0	3.0	1.5	1.6	7150	chr2L	12558329	intergenic	not near genes	chr2L	12561904	intergenic	not near genes	chr2L	12565479	intergenic	not near genes	chr2L_4_12560001	chr2L_12560001	RAL-812
211	chr2L	12731056	12731086	chr2L	12735823	12735853	F-element	9	4767	1.5	2.0	1.8	3.2	4797	chr2L	12731056	intron	MRP +	chr2L	12733454	intron	MRP +	chr2L	12735853	intron	MRP +	chr2L_9_12730001	chr2L_12730001	RAL-812
212	chr2L	12739175	12739201	chr2L	12743952	12743982	Doc	11	4779	2.5	2.5	2.5	3.1	4807	chr2L	12739175	exon	MRP +	chr2L	12741578	intron	MRP +	chr2L	12743982	exon	MRP +	chr2L_11_12740001	chr2L_12740001	RAL-812
215	chr2L	12861697	12861728	chr2L	12863164	12863195	hobo	12	1465	3.0	3.5	3.2	2.9	1498	chr2L	12861697	intergenic	not near genes	chr2L	12862446	intergenic	not near genes	chr2L	12863195	intergenic	not near genes	chr2L_12_12860001	chr2L_12860001	RAL-812
216	chr2L	12894022	12894038	chr2L	12895489	12895491	hobo	5	1464	7.0	4.0	5.5	0.8	1469	chr2L	12894022	intergenic	not near genes	chr2L	12894756	intergenic	not near genes	chr2L	12895491	intergenic	not near genes	chr2L_5_12890001	chr2L_12890001	RAL-812
218	chr2L	12933849	12933882	chr2L	12941316	12941341	blood	12	7466	4.5	1.0	2.8	3.2	7492	chr2L	12933849	intergenic	not near genes	chr2L	12937595	intergenic	not near genes	chr2L	12941341	intergenic	not near genes	chr2L_12_12935001	chr2L_12935001	RAL-812
223	chr2L	13405653	13405679	chr2L	13410450	13410476	Doc	12	4797	2.0	6.0	4.0	2.4	4823	chr2L	13405653	exon	CG7110 +	chr2L	13408064	intron	CG7110 +	chr2L	13410476	intron	CG7110 +	chr2L_12_13405001	chr2L_13405001	RAL-812
225	chr2L	13449462	13449491	chr2L	13456898	13456927	Quasimodo	5	7436	2.5	5.0	3.8	1.0	7465	chr2L	13449462	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453194	intron	CG42784 +	chr2L	13456927	intron	CG42784 +	chr2L_5_13450001	chr2L_13450001	RAL-812
226	chr2L	13481457	13481471	chr2L	13482064	13482078	jockey	7	607	4.0	9.0	6.5	0.9	621	chr2L	13481457	intron	CG42784 +	chr2L	13481768	intron	CG42784 +	chr2L	13482078	intron	CG42784 +	chr2L_7_13480001	chr2L_13480001	RAL-812
230	chr2L	13761807	13761835	chr2L	13762916	13762945	Doc	9	1109	3.0	3.5	3.2	2.1	1138	chr2L	13761807	intron	TM9SF4 +	chr2L	13762376	intron	TM9SF4 +	chr2L	13762945	intron	TM9SF4 +	chr2L_9_13760001	chr2L_13760001	RAL-812
232	chr2L	13853082	13853115	chr2L	13862232	13862265	roo	4	9150	5.0	2.0	3.5	0.9	9183	chr2L	13853082	intron	CenG1A +	chr2L	13857674	intron	CenG1A +	chr2L	13862265	intron	CenG1A +	chr2L_4_13855001	chr2L_13855001	RAL-812
242	chr2L	14803879	14803913	chr2L	14809082	14809116	copia	13	5199	2.0	6.0	4.0	2.6	5237	chr2L	14803879	intergenic	not near genes	chr2L	14806498	intergenic	not near genes	chr2L	14809116	intergenic	not near genes	chr2L_13_14805001	chr2L_14805001	RAL-812
244	chr2L	14889957	14889976	chr2L	14890380	14890401	jockey	11	424	4.0	4.5	4.2	2.1	444	chr2L	14889957	intergenic	not near genes	chr2L	14890179	intergenic	not near genes	chr2L	14890401	intergenic	not near genes	chr2L_11_14890001	chr2L_14890001	RAL-812
246	chr2L	14984386	14984405	chr2L	14991988	14992007	opus	4	7602	3.5	1.5	2.5	1.1	7621	chr2L	14984386	intron	mol -	chr2L	14988196	intron	mol -	chr2L	14992007	intron	mol -	chr2L_4_14985001	chr2L_14985001	RAL-812
253	chr2L	15446050	15446067	chr2L	15453519	15453536	blood	4	7469	5.5	0.5	3.0	1.0	7486	chr2L	15446050	intergenic	not near genes	chr2L	15449793	intergenic	not near genes	chr2L	15453536	intergenic	not near genes	chr2L_4_15445001	chr2L_15445001	RAL-812
254	chr2L	15586413	15586436	chr2L	15593465	15593488	297	6	7052	2.5	1.0	1.8	2.1	7075	chr2L	15586413	intergenic	not near genes	chr2L	15589950	intergenic	not near genes	chr2L	15593488	intergenic	not near genes	chr2L_6_15585001	chr2L_15585001	RAL-812
258	chr2L	16071771	16071771	chr2L	16217660	16217661	copia	12	145889	17.0	20.5	18.8	0.6	145890	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217661	intergenic	not near genes	chr2L_12_16140001	chr2L_16140001	RAL-812
260	chr2L	16141166	16141195	chr2L	16146373	16146402	copia	9	5207	0.5	3.5	2.0	3.0	5236	chr2L	16141166	intergenic	not near genes	chr2L	16143784	intergenic	not near genes	chr2L	16146402	intergenic	not near genes	chr2L_9_16140001	chr2L_16140001	RAL-812
262	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	6	145889	17.0	20.5	18.8	0.3	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_6_16140001	chr2L_16140001	RAL-812
265	chr2L	16280255	16280286	chr2L	16281423	16281442	1360	12	1165	3.0	4.0	3.5	2.7	1187	chr2L	16280255	intron	crp -	chr2L	16280848	intron	crp -	chr2L	16281442	intron	crp -	chr2L_12_16280001	chr2L_16280001	RAL-812
268	chr2L	16958105	16958127	chr2L	16962893	16962915	Doc	6	4788	1.5	2.0	1.8	2.1	4810	chr2L	16958105	intergenic	not near genes	chr2L	16960510	intergenic	not near genes	chr2L	16962915	intergenic	not near genes	chr2L_6_16960001	chr2L_16960001	RAL-812
274	chr2L	17167565	17167586	chr2L	17167804	17167827	pogo	5	241	0.5	1.5	1.0	2.5	262	chr2L	17167565	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167696	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167827	intron,intron	CG34106 +,beat-IIIa +	chr2L_5_17165001	chr2L_17165001	RAL-812
276	chr2L	17273195	17273222	chr2L	17277977	17277993	F-element	12	4779	3.0	3.0	3.0	3.0	4798	chr2L	17273195	intergenic	not near genes	chr2L	17275594	intergenic	not near genes	chr2L	17277993	intergenic	not near genes	chr2L_12_17275001	chr2L_17275001	RAL-812
288	chr2L	17911971	17911986	chr2L	17914148	17914165	pogo	4	2175	6.0	6.5	6.2	0.6	2194	chr2L	17911971	intergenic	not near genes	chr2L	17913068	intergenic	not near genes	chr2L	17914165	intergenic	CG43271 -	chr2L_4_17910001	chr2L_17910001	RAL-812
290	chr2L	18051884	18051908	chr2L	18061028	18061053	roo	7	9143	5.0	3.0	4.0	1.4	9169	chr2L	18051884	intron	rdo +	chr2L	18056468	intron	rdo +	chr2L	18061053	intron	rdo +	chr2L_7_18055001	chr2L_18055001	RAL-812
296	chr2L	18408028	18408055	chr2L	18412808	18412839	Doc	5	4783	2.0	0.0	1.0	2.5	4811	chr2L	18408028	intergenic	not near genes	chr2L	18410434	intergenic	not near genes	chr2L	18412839	intergenic	not near genes	chr2L_5_18410001	chr2L_18410001	RAL-812
304	chr2L	19147377	19147403	chr2L	19154412	19154437	297	6	7035	4.0	5.0	4.5	1.1	7060	chr2L	19147377	intron	brat +	chr2L	19150907	intron	brat +	chr2L	19154437	intron	brat +	chr2L_6_19150001	chr2L_19150001	RAL-812
309	chr2L	19345015	19345047	chr2L	19357222	19357234	blood	11	12206	2.0	3.0	2.5	3.1	12219	chr2L	19345015	intron	dnt -	chr2L	19351124	intron	dnt -	chr2L	19357234	intron	dnt -	chr2L_11_19350001	chr2L_19350001	RAL-812
317	chr2L	19620095	19620132	chr2L	19621079	19621121	jockey	13	988	2.5	3.5	3.0	3.2	1026	chr2L	19620095	intron	Lar +	chr2L	19620608	intron	Lar +	chr2L	19621121	intron	Lar +	chr2L_13_19620001	chr2L_19620001	RAL-812
319	chr2L	19703535	19703565	chr2L	19712671	19712700	roo	18	9135	3.0	1.0	2.0	6.0	9165	chr2L	19703535	intron	Lar +	chr2L	19708118	intron	Lar +	chr2L	19712700	intron	Lar +	chr2L_18_19705001	chr2L_19705001	RAL-812
320	chr2L	19737360	19737388	chr2L	19740828	19740844	1360	9	3464	5.0	8.0	6.5	1.2	3484	chr2L	19737360	intergenic	Nf-YB +	chr2L	19739102	intergenic	not near genes	chr2L	19740844	intergenic	not near genes	chr2L_9_19735001	chr2L_19735001	RAL-812
322	chr2L	19762813	19762840	chr2L	19763055	19763082	pogo	10	242	2.5	3.0	2.8	2.6	269	chr2L	19762813	5` UTR	fbp -	chr2L	19762948	intron	fbp -	chr2L	19763082	intron	fbp -	chr2L_10_19760001	chr2L_19760001	RAL-812
330	chr2L	20005880	20005897	chr2L	20010956	20010973	flea	7	5076	1.0	4.5	2.8	1.8	5093	chr2L	20005880	intron	CG43861 -	chr2L	20008426	intron	CG43861 -	chr2L	20010973	intron	CG43861 -	chr2L_7_20005001	chr2L_20005001	RAL-812
331	chr2L	20272121	20272143	chr2L	20282824	20282854	copia	6	10710	2.0	4.0	3.0	1.5	10733	chr2L	20272121	intergenic	not near genes	chr2L	20277488	intergenic	not near genes	chr2L	20282854	intergenic	not near genes	chr2L_6_20275001	chr2L_20275001	RAL-812
340	chr2L	20568666	20568682	chr2L	20569056	20569071	X-element	4	390	2.0	3.5	2.8	1.1	405	chr2L	20568666	intron	CR45347 +	chr2L	20568868	intron	CR45347 +	chr2L	20569071	intron	CR45347 +	chr2L_4_20565001	chr2L_20565001	RAL-812
341	chr2L	20576236	20576249	chr2L	20583701	20583717	blood	5	7467	3.0	2.0	2.5	1.4	7481	chr2L	20576236	intergenic	not near genes	chr2L	20579976	intergenic	not near genes	chr2L	20583717	3` UTR	CR44909 -	chr2L_5_20575001	chr2L_20575001	RAL-812
345	chr2L	20901471	20901488	chr2L	20902635	20902650	1360	4	1164	0.5	1.5	1.0	2.0	1179	chr2L	20901471	intron,intron	CG43739 -,sky -	chr2L	20902060	intron,intron	CG43739 -,sky -	chr2L	20902650	intron,intron	CG43739 -,sky -	chr2L_4_20900001	chr2L_20900001	RAL-812
346	chr2L	20976642	20976680	chr2L	20981457	20981495	X-element	5	4814	1.5	2.0	1.8	1.8	4853	chr2L	20976642	intron	CG42238 -	chr2L	20979068	intron	CG42238 -	chr2L	20981495	intron	CG42238 -	chr2L_5_20975001	chr2L_20975001	RAL-812
348	chr2L	21020271	21020310	chr2L	21023948	21023987	NOF	10	3676	2.0	2.0	2.0	3.3	3716	chr2L	21020271	intron	CG42238 -	chr2L	21022129	intron	CG42238 -	chr2L	21023987	intron	CG42238 -	chr2L_10_21020001	chr2L_21020001	RAL-812
349	chr2L	21041136	21041166	chr2L	21049397	21049426	Tirant	6	8260	3.0	2.0	2.5	1.7	8290	chr2L	21041136	intron	CG42238 -	chr2L	21045281	intron	CG42238 -	chr2L	21049426	intron	CG42238 -	chr2L_6_21045001	chr2L_21045001	RAL-812
351	chr2L	21597027	21597060	chr2L	21604771	21604804	roo	6	7744	0.5	1.0	0.8	3.3	7777	chr2L	21597027	intergenic	not near genes	chr2L	21600916	intergenic	not near genes	chr2L	21604804	intergenic	not near genes	chr2L_6_21600001	chr2L_21600001	RAL-812
358	chr2L	21981683	21981715	chr2L	21990848	21990879	roo	6	9165	1.5	7.5	4.5	1.1	9196	chr2L	21981683	exon	CG2528 -	chr2L	21986281	intron	CG2528 -	chr2L	21990879	exon	CG2528 -	chr2L_6_21985001	chr2L_21985001	RAL-812
362	chr2L	22258617	22258647	chr2L	22260740	22260771	G6	7	2124	2.0	1.0	1.5	2.8	2154	chr2L	22258617	intergenic	Tif-IA +	chr2L	22259694	intergenic	not near genes	chr2L	22260771	intergenic	not near genes	chr2L_7_22255001	chr2L_22255001	RAL-812
364	chr2L	22679805	22679828	chr2L	22684575	22684600	F-element	9	4771	1.5	3.5	2.5	2.6	4795	chr2L	22679805	intron	CG40006 -	chr2L	22682202	intron	CG40006 -	chr2L	22684600	intron	CG40006 -	chr2L_9_22680001	chr2L_22680001	RAL-812
365	chr2R	529323	529349	chr2R	537948	537974	Max-element	7	8625	1.0	2.5	1.8	2.5	8651	chr2R	529323	intron	CG40378 +	chr2R	533648	intron	CG40378 +	chr2R	537974	intron	CG40378 +	chr2R_7_530001	chr2R_530001	RAL-812
366	chr2R	1082369	1082382	chr2R	1087127	1087158	Doc	6	4760	3.5	6.5	5.0	1.0	4789	chr2R	1082369	intron	rl +	chr2R	1084764	intron	rl +	chr2R	1087158	intron	rl +	chr2R_6_1080001	chr2R_1080001	RAL-812
367	chr2R	2498982	2499014	chr2R	2508129	2508159	roo	6	9146	2.5	1.0	1.8	2.1	9177	chr2R	2498982	intron	MFS17 -	chr2R	2503570	intron	MFS17 -	chr2R	2508159	intron	MFS17 -	chr2R_6_2500001	chr2R_2500001	RAL-812
381	chr2R	5417996	5418026	chr2R	5420628	5420658	Burdock	4	2632	1.0	1.0	1.0	2.0	2662	chr2R	5417996	intron	laccase2 +	chr2R	5419327	intron	laccase2 +	chr2R	5420658	intron	laccase2 +	chr2R_4_5415001	chr2R_5415001	RAL-812
384	chr2R	5869278	5869299	chr2R	5874353	5874375	flea	4	5076	1.0	3.0	2.0	1.3	5097	chr2R	5869278	intergenic	not near genes	chr2R	5871826	intergenic	not near genes	chr2R	5874375	intergenic	not near genes	chr2R_4_5870001	chr2R_5870001	RAL-812
388	chr2R	6096731	6096752	chr2R	6101909	6101917	BS	4	5170	5.5	6.0	5.8	0.6	5186	chr2R	6096731	intron	EcR -	chr2R	6099324	intron	EcR -	chr2R	6101917	intron	EcR -	chr2R_4_6095001	chr2R_6095001	RAL-812
397	chr2R	7139944	7139956	chr2R	7141420	7141436	hopper2	12	1489	1.5	10.0	5.8	1.8	1492	chr2R	7139944	intergenic	not near genes	chr2R	7140690	intergenic	not near genes	chr2R	7141436	intergenic	not near genes	chr2R_12_7140001	chr2R_7140001	RAL-812
399	chr2R	7196568	7196575	chr2R	7201342	7201350	F-element	4	4774	6.5	0.5	3.5	0.9	4782	chr2R	7196568	intron	pk +	chr2R	7198959	intron	pk +	chr2R	7201350	intron	pk +	chr2R_4_7195001	chr2R_7195001	RAL-812
402	chr2R	7235826	7235851	chr2R	7240918	7240927	jockey	6	5088	3.0	2.5	2.8	1.6	5101	chr2R	7235826	intergenic	not near genes	chr2R	7238376	intergenic	not near genes	chr2R	7240927	intergenic	not near genes	chr2R_6_7235001	chr2R_7235001	RAL-812
404	chr2R	7434893	7434918	chr2R	7439194	7439219	Juan	8	4301	1.0	3.0	2.0	2.7	4326	chr2R	7434893	intergenic	so +	chr2R	7437056	intergenic	not near genes	chr2R	7439219	intergenic	not near genes	chr2R_8_7435001	chr2R_7435001	RAL-812
406	chr2R	7608416	7608437	chr2R	7613608	7613624	I-element	4	5196	1.5	0.0	0.8	2.2	5208	chr2R	7608416	intron	CG1358 -	chr2R	7611020	intron	CG1358 -	chr2R	7613624	intron	CG1358 -	chr2R_4_7610001	chr2R_7610001	RAL-812
410	chr2R	7815671	7815700	chr2R	7822140	7822168	Burdock	8	6468	2.5	2.5	2.5	2.3	6497	chr2R	7815671	intergenic	CG1882 +	chr2R	7818920	intergenic	not near genes	chr2R	7822168	3` UTR	cathD -	chr2R_8_7815001	chr2R_7815001	RAL-812
411	chr2R	7869191	7869215	chr2R	7873977	7874001	Doc	10	4785	4.0	4.5	4.2	1.9	4810	chr2R	7869191	intron	Dgk -	chr2R	7871596	intron	Dgk -	chr2R	7874001	intron	Dgk -	chr2R_10_7870001	chr2R_7870001	RAL-812
421	chr2R	8398231	8398243	chr2R	8402986	8403024	Doc	5	4776	3.0	4.0	3.5	1.1	4793	chr2R	8398231	intron	CG2121 -	chr2R	8400628	intron	CG2121 -	chr2R	8403024	intron	CG2121 -	chr2R_5_8400001	chr2R_8400001	RAL-812
424	chr2R	8566033	8566065	chr2R	8566985	8567017	1360	9	952	2.5	5.5	4.0	1.8	984	chr2R	8566033	5` UTR	Cyp6a14 -	chr2R	8566525	5` UTR	Cyp6a14 -	chr2R	8567017	5` UTR	Cyp6a14 -	chr2R_9_8565001	chr2R_8565001	RAL-812
426	chr2R	8722762	8722795	chr2R	8723003	8723021	pogo	10	235	3.0	3.0	3.0	2.5	259	chr2R	8722762	intron	CG14767 -	chr2R	8722892	intron	CG14767 -	chr2R	8723021	intron	CG14767 -	chr2R_10_8720001	chr2R_8720001	RAL-812
427	chr2R	8777931	8777944	chr2R	8784135	8784148	diver	5	6204	0.0	3.5	1.8	1.8	6217	chr2R	8777931	intergenic	not near genes	chr2R	8781040	intergenic	not near genes	chr2R	8784148	intergenic	not near genes	chr2R_5_8780001	chr2R_8780001	RAL-812
430	chr2R	9151306	9151322	chr2R	9157776	9157792	Burdock	4	6470	7.0	2.0	4.5	0.7	6486	chr2R	9151306	3` UTR	CG30345 +	chr2R	9154549	intergenic	not near genes	chr2R	9157792	intergenic	CG8008 -	chr2R_4_9150001	chr2R_9150001	RAL-812
432	chr2R	9212713	9212720	chr2R	9213183	9213206	roo	6	480	6.5	4.5	5.5	0.9	493	chr2R	9212713	intergenic	CR45309 +	chr2R	9212960	intergenic	CR45309 +	chr2R	9213206	5` UTR	CR45309 +	chr2R_6_9210001	chr2R_9210001	RAL-812
446	chr2R	9945437	9945441	chr2R	9945633	9945637	BS	4	195	8.0	2.5	5.2	0.6	200	chr2R	9945437	intron	Mef2 -	chr2R	9945537	intron	Mef2 -	chr2R	9945637	intron	Mef2 -	chr2R_4_9945001	chr2R_9945001	RAL-812
447	chr2R	9945442	9945469	chr2R	9945627	9945665	BS	7	193	3.5	2.5	3.0	1.8	223	chr2R	9945442	intron	Mef2 -	chr2R	9945554	intron	Mef2 -	chr2R	9945665	intron	Mef2 -	chr2R_7_9945001	chr2R_9945001	RAL-812
449	chr2R	10005848	10005882	chr2R	10007013	10007025	1360	11	1161	6.5	1.5	4.0	2.2	1177	chr2R	10005848	intron	Pka-R2 -	chr2R	10006436	intron	Pka-R2 -	chr2R	10007025	intron	Pka-R2 -	chr2R_11_10005001	chr2R_10005001	RAL-812
472	chr2R	10948030	10948062	chr2R	10955580	10955612	17.6	12	7548	2.5	4.5	3.5	2.7	7582	chr2R	10948030	intergenic	not near genes	chr2R	10951821	intergenic	not near genes	chr2R	10955612	intergenic	not near genes	chr2R_12_10950001	chr2R_10950001	RAL-812
473	chr2R	11009812	11009845	chr2R	11018986	11019019	roo	8	9172	1.0	2.0	1.5	3.2	9207	chr2R	11009812	intron	luna -	chr2R	11014416	intron	luna -	chr2R	11019019	intron	luna -	chr2R_8_11010001	chr2R_11010001	RAL-812
474	chr2R	11019883	11019913	chr2R	11024949	11024955	jockey	12	5064	2.5	3.5	3.0	3.0	5072	chr2R	11019883	intron	luna -	chr2R	11022419	intron	luna -	chr2R	11024955	intron	luna -	chr2R_12_11020001	chr2R_11020001	RAL-812
475	chr2R	11207814	11207840	chr2R	11208005	11208005	BS	9	189	10.0	3.0	6.5	1.2	191	chr2R	11207814	intron	shn +	chr2R	11207910	intron	shn +	chr2R	11208005	intron	shn +	chr2R_9_11205001	chr2R_11205001	RAL-812
476	chr2R	11415520	11415550	chr2R	11418669	11418699	opus	6	3148	2.0	7.0	4.5	1.1	3179	chr2R	11415520	intron	Drip -	chr2R	11417110	intron	Drip -	chr2R	11418699	intron	Drip -	chr2R_6_11415001	chr2R_11415001	RAL-812
488	chr2R	12481142	12481169	chr2R	12482943	12482973	roo	7	1798	1.5	4.5	3.0	1.8	1831	chr2R	12481142	exon	Dh44-R2 +	chr2R	12482058	intron	Dh44-R2 +	chr2R	12482973	intron	Dh44-R2 +	chr2R_7_12480001	chr2R_12480001	RAL-812
489	chr2R	12501691	12501725	chr2R	12503849	12503887	Rt1c	8	2161	1.5	2.5	2.0	2.7	2196	chr2R	12501691	intron	fdl -	chr2R	12502789	intron	fdl -	chr2R	12503887	intron	fdl -	chr2R_8_12500001	chr2R_12500001	RAL-812
497	chr2R	13136837	13136868	chr2R	13141635	13141662	Doc	10	4797	2.0	5.0	3.5	2.2	4825	chr2R	13136837	exon	Cap-G +	chr2R	13139250	intron	Cap-G +	chr2R	13141662	intron	Cap-G +	chr2R_10_13135001	chr2R_13135001	RAL-812
504	chr2R	13580503	13580529	chr2R	13580853	13580877	jockey	4	349	0.5	4.0	2.2	1.2	374	chr2R	13580503	3` UTR	CG6191 -	chr2R	13580690	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580877	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_4_13580001	chr2R_13580001	RAL-812
511	chr2R	13905614	13905623	chr2R	13907596	13907604	Rt1a	4	1982	1.0	5.5	3.2	1.0	1990	chr2R	13905614	intron	shot -	chr2R	13906609	intron	shot -	chr2R	13907604	intron	shot -	chr2R_4_13905001	chr2R_13905001	RAL-812
516	chr2R	14394227	14394246	chr2R	14399016	14399035	Doc	4	4787	2.0	3.0	2.5	1.1	4808	chr2R	14394227	intergenic	not near genes	chr2R	14396631	intergenic	not near genes	chr2R	14399035	intergenic	not near genes	chr2R_4_14395001	chr2R_14395001	RAL-812
517	chr2R	14467298	14467304	chr2R	14476450	14476455	roo	5	9152	2.0	5.5	3.8	1.0	9157	chr2R	14467298	intergenic	not near genes	chr2R	14471876	intergenic	not near genes	chr2R	14476455	5` UTR	CR44462 +	chr2R_5_14470001	chr2R_14470001	RAL-812
518	chr2R	14467307	14467323	chr2R	14476443	14476475	roo	5	9145	2.5	5.0	3.8	1.0	9168	chr2R	14467307	intergenic	not near genes	chr2R	14471891	intergenic	not near genes	chr2R	14476475	5` UTR	CR44462 +	chr2R_5_14470001	chr2R_14470001	RAL-812
528	chr2R	15004739	15004749	chr2R	15005068	15005078	jockey	4	329	5.0	3.5	4.2	0.8	339	chr2R	15004739	intergenic	not near genes	chr2R	15004908	intergenic	not near genes	chr2R	15005078	intergenic	not near genes	chr2R_4_15000001	chr2R_15000001	RAL-812
530	chr2R	15015459	15015472	chr2R	15022883	15022896	mdg1	5	7424	4.5	0.5	2.5	1.4	7437	chr2R	15015459	intron	hbs +	chr2R	15019178	intron	hbs +	chr2R	15022896	intron	hbs +	chr2R_5_15015001	chr2R_15015001	RAL-812
532	chr2R	15084981	15084997	chr2R	15092030	15092045	297	5	7049	2.0	3.5	2.8	1.3	7064	chr2R	15084981	intergenic	not near genes	chr2R	15088513	intergenic	not near genes	chr2R	15092045	5` UTR	CR44457 +	chr2R_5_15085001	chr2R_15085001	RAL-812
533	chr2R	15119317	15119345	chr2R	15127797	15127819	Tirant	5	8477	7.0	4.5	5.8	0.7	8502	chr2R	15119317	intron	chn +	chr2R	15123568	intron	chn +	chr2R	15127819	intron	chn +	chr2R_5_15120001	chr2R_15120001	RAL-812
570	chr2R	17147243	17147264	chr2R	17152274	17152295	jockey	9	5031	4.0	5.0	4.5	1.6	5052	chr2R	17147243	intergenic	not near genes	chr2R	17149769	intergenic	not near genes	chr2R	17152295	intergenic	not near genes	chr2R_9_17145001	chr2R_17145001	RAL-812
574	chr2R	17236507	17236532	chr2R	17241711	17241736	copia	12	5203	2.5	4.5	3.5	2.7	5229	chr2R	17236507	intron	mbl +	chr2R	17239122	intron	mbl +	chr2R	17241736	intron	mbl +	chr2R_12_17235001	chr2R_17235001	RAL-812
590	chr2R	18358395	18358425	chr2R	18372607	18372638	roo	5	14212	1.0	2.5	1.8	1.8	14243	chr2R	18358395	intergenic	not near genes	chr2R	18365516	intergenic	not near genes	chr2R	18372638	intergenic	not near genes	chr2R_5_18365001	chr2R_18365001	RAL-812
599	chr2R	18575811	18575831	chr2R	18581989	18582019	3S18	9	6183	2.0	3.5	2.8	2.4	6208	chr2R	18575811	intron	GEFmeso -	chr2R	18578915	intron	GEFmeso -	chr2R	18582019	intron	GEFmeso -	chr2R_9_18575001	chr2R_18575001	RAL-812
600	chr2R	18590868	18590898	chr2R	18600020	18600046	roo	10	9150	3.5	3.0	3.2	2.4	9178	chr2R	18590868	intron	GEFmeso -	chr2R	18595457	intron	GEFmeso -	chr2R	18600046	intron	GEFmeso -	chr2R_10_18595001	chr2R_18595001	RAL-812
617	chr2R	19776606	19776622	chr2R	19779927	19779945	jockey	5	3322	2.0	3.5	2.8	1.3	3339	chr2R	19776606	intergenic	not near genes	chr2R	19778276	intergenic	not near genes	chr2R	19779945	intergenic	not near genes	chr2R_5_19775001	chr2R_19775001	RAL-812
620	chr2R	19914849	19914877	chr2R	19922261	19922289	mdg1	10	7412	2.5	3.5	3.0	2.5	7440	chr2R	19914849	intergenic	not near genes	chr2R	19918569	intergenic	not near genes	chr2R	19922289	intergenic	not near genes	chr2R_10_19915001	chr2R_19915001	RAL-812
621	chr2R	19957436	19957462	chr2R	19962635	19962660	copia	6	5196	2.0	6.0	4.0	1.2	5224	chr2R	19957436	intergenic	CG44623 +	chr2R	19960048	intergenic	not near genes	chr2R	19962660	intergenic	not near genes	chr2R_6_19960001	chr2R_19960001	RAL-812
635	chr2R	20739443	20739477	chr2R	20744211	20744245	F-element	12	4767	4.5	3.0	3.8	2.5	4802	chr2R	20739443	intron	dpr +	chr2R	20741844	intron	dpr +	chr2R	20744245	intron	dpr +	chr2R_12_20740001	chr2R_20740001	RAL-812
636	chr2R	20783319	20783332	chr2R	20788091	20788104	F-element	4	4772	0.5	0.5	0.5	2.7	4785	chr2R	20783319	intergenic	not near genes	chr2R	20785712	intergenic	not near genes	chr2R	20788104	intergenic	CG43666 -	chr2R_4_20785001	chr2R_20785001	RAL-812
643	chr2R	21738277	21738311	chr2R	21747437	21747447	roo	9	9153	3.5	2.5	3.0	2.2	9170	chr2R	21738277	intergenic	not near genes	chr2R	21742862	intergenic	not near genes	chr2R	21747447	intergenic	not near genes	chr2R_9_21740001	chr2R_21740001	RAL-812
644	chr2R	21753082	21753115	chr2R	21753567	21753600	roo	9	484	1.0	2.5	1.8	3.2	518	chr2R	21753082	intergenic	not near genes	chr2R	21753341	intergenic	not near genes	chr2R	21753600	intergenic	not near genes	chr2R_9_21750001	chr2R_21750001	RAL-812
658	chr2R	22349701	22349725	chr2R	22351483	22351509	jockey	7	1783	5.5	6.0	5.8	1.0	1808	chr2R	22349701	intron	Liprin-gamma -	chr2R	22350605	intron	Liprin-gamma -	chr2R	22351509	intron	Liprin-gamma -	chr2R_7_22350001	chr2R_22350001	RAL-812
659	chr2R	22360378	22360391	chr2R	22360811	22360823	jockey	5	433	7.0	2.5	4.8	0.9	445	chr2R	22360378	intron	Liprin-gamma -	chr2R	22360600	intron	Liprin-gamma -	chr2R	22360823	intron	Liprin-gamma -	chr2R_5_22360001	chr2R_22360001	RAL-812
660	chr2R	22525757	22525785	chr2R	22529306	22529331	jockey	10	3553	1.5	4.0	2.8	2.6	3574	chr2R	22525757	intron	px -	chr2R	22527544	intron	px -	chr2R	22529331	intron	px -	chr2R_10_22525001	chr2R_22525001	RAL-812
685	chr2R	24147077	24147094	chr2R	24154654	24154672	412	5	7577	4.0	11.5	7.8	0.6	7595	chr2R	24147077	intron	Dat +	chr2R	24150874	intron	Dat +	chr2R	24154672	intron	Dat +	chr2R_5_24150001	chr2R_24150001	RAL-812
687	chr2R	24353428	24353462	chr2R	24361790	24361824	roo	11	8362	3.0	5.0	4.0	2.2	8396	chr2R	24353428	intron,intron	bs +,CR44811 -	chr2R	24357626	intron,intron	bs +,CR44811 -	chr2R	24361824	intron,intron	bs +,CR44811 -	chr2R_11_24355001	chr2R_24355001	RAL-812
690	chr2R	24647591	24647617	chr2R	24655148	24655174	412	6	7556	5.0	6.0	5.5	0.9	7583	chr2R	24647591	intergenic	not near genes	chr2R	24651382	intergenic	not near genes	chr2R	24655174	intergenic	not near genes	chr2R_6_24650001	chr2R_24650001	RAL-812
692	chr2R	24763609	24763638	chr2R	24765585	24765607	G2	11	1970	5.0	4.0	4.5	2.0	1998	chr2R	24763609	exon	CG3894 +	chr2R	24764608	intron	CG3894 +	chr2R	24765607	exon	CG3894 +	chr2R_11_24760001	chr2R_24760001	RAL-812
702	chr2R	25141648	25141683	chr2R	25159338	25159373	roo	6	17690	3.0	3.0	3.0	1.5	17725	chr2R	25141648	intergenic	not near genes	chr2R	25150510	intergenic	not near genes	chr2R	25159373	intergenic	not near genes	chr2R_6_25150001	chr2R_25150001	RAL-812
707	chr3L	110223	110238	chr3L	119390	119405	roo	5	9167	3.0	1.0	2.0	1.7	9182	chr3L	110223	intergenic	not near genes	chr3L	114814	intergenic	not near genes	chr3L	119405	intergenic	not near genes	chr3L_5_110001	chr3L_110001	RAL-812
708	chr3L	402698	402718	chr3L	409746	409771	297	8	7052	3.5	4.5	4.0	1.6	7073	chr3L	402698	intergenic	not near genes	chr3L	406234	intergenic	not near genes	chr3L	409771	intergenic	not near genes	chr3L_8_405001	chr3L_405001	RAL-812
721	chr3L	858006	858031	chr3L	866479	866500	Tirant	5	8471	3.5	2.0	2.8	1.3	8494	chr3L	858006	intergenic	not near genes	chr3L	862253	intergenic	not near genes	chr3L	866500	5` UTR	CG12502 +	chr3L_5_860001	chr3L_860001	RAL-812
723	chr3L	925174	925197	chr3L	932600	932623	mdg1	11	7426	5.5	2.5	4.0	2.2	7449	chr3L	925174	intron	Glut1 +	chr3L	928898	intron	Glut1 +	chr3L	932623	intron	Glut1 +	chr3L_11_925001	chr3L_925001	RAL-812
724	chr3L	939774	939800	chr3L	940895	940918	jockey	9	1120	2.0	0.5	1.2	4.1	1144	chr3L	939774	intron	Glut1 +	chr3L	940346	intron	Glut1 +	chr3L	940918	intron	Glut1 +	chr3L_9_940001	chr3L_940001	RAL-812
730	chr3L	1154131	1154155	chr3L	1163281	1163305	roo	4	9150	4.0	0.5	2.2	1.2	9174	chr3L	1154131	intron	bab2 -	chr3L	1158718	intron	bab2 -	chr3L	1163305	intron	bab2 -	chr3L_4_1155001	chr3L_1155001	RAL-812
731	chr3L	1219598	1219621	chr3L	1227328	1227354	412	4	7732	1.5	5.0	3.2	1.0	7756	chr3L	1219598	intron	mwh +	chr3L	1223476	intron	mwh +	chr3L	1227354	intron	mwh +	chr3L_4_1220001	chr3L_1220001	RAL-812
734	chr3L	1505997	1506028	chr3L	1513594	1513623	17.6	8	7597	8.0	4.0	6.0	1.1	7626	chr3L	1505997	intron,intron	Psa +,cue -	chr3L	1509810	intron,intron	Psa +,cue -	chr3L	1513623	intron,intron	Psa +,cue -	chr3L_8_1505001	chr3L_1505001	RAL-812
742	chr3L	2447503	2447535	chr3L	2456659	2456690	roo	12	9155	3.5	3.0	3.2	2.9	9187	chr3L	2447503	intron	CG45186 +	chr3L	2452096	intron	CG45186 +	chr3L	2456690	intron	CG45186 +	chr3L_12_2450001	chr3L_2450001	RAL-812
750	chr3L	2751450	2751463	chr3L	2755745	2755757	F-element	6	4295	3.5	4.0	3.8	1.2	4307	chr3L	2751450	intron	Mrtf -	chr3L	2753604	intron	Mrtf -	chr3L	2755757	intron	Mrtf -	chr3L_6_2750001	chr3L_2750001	RAL-812
755	chr3L	3281439	3281473	chr3L	3281935	3281969	Doc	8	495	2.5	7.5	5.0	1.3	530	chr3L	3281439	intron	CG12017 +	chr3L	3281704	intron	CG12017 +	chr3L	3281969	intron	CG12017 +	chr3L_8_3280001	chr3L_3280001	RAL-812
756	chr3L	3475073	3475101	chr3L	3475517	3475537	jockey	11	443	1.5	2.5	2.0	3.7	464	chr3L	3475073	intron	CG42324 +	chr3L	3475305	intron	CG42324 +	chr3L	3475537	intron	CG42324 +	chr3L_11_3475001	chr3L_3475001	RAL-812
762	chr3L	3601303	3601330	chr3L	3606614	3606637	copia	7	5310	2.5	5.0	3.8	1.5	5334	chr3L	3601303	intron	Eip63E +	chr3L	3603970	intron	Eip63E +	chr3L	3606637	intron	Eip63E +	chr3L_7_3600001	chr3L_3600001	RAL-812
765	chr3L	3833751	3833767	chr3L	3833992	3834008	pogo	5	241	1.5	2.0	1.8	1.8	257	chr3L	3833751	intron	enc +	chr3L	3833880	intron	enc +	chr3L	3834008	intron	enc +	chr3L_5_3830001	chr3L_3830001	RAL-812
769	chr3L	4328740	4328759	chr3L	4336238	4336256	412	4	7498	1.0	3.0	2.0	1.3	7516	chr3L	4328740	intron	Cip4 -	chr3L	4332498	intron	Cip4 -	chr3L	4336256	intron	Cip4 -	chr3L_4_4330001	chr3L_4330001	RAL-812
781	chr3L	5034156	5034178	chr3L	5043308	5043320	roo	6	9149	3.5	0.5	2.0	2.0	9164	chr3L	5034156	intron	Con -	chr3L	5038738	intron	Con -	chr3L	5043320	intron	Con -	chr3L_6_5035001	chr3L_5035001	RAL-812
791	chr3L	5910035	5910057	chr3L	5910275	5910298	pogo	8	241	3.5	2.0	2.8	2.1	263	chr3L	5910035	intron	CG13288 +	chr3L	5910166	intron	CG13288 +	chr3L	5910298	intron	CG13288 +	chr3L_8_5910001	chr3L_5910001	RAL-812
792	chr3L	5926316	5926323	chr3L	5926506	5926513	BS	5	189	10.0	5.5	7.8	0.6	197	chr3L	5926316	intron	Vap-33B +	chr3L	5926414	intron	Vap-33B +	chr3L	5926513	intron	Vap-33B +	chr3L_5_5925001	chr3L_5925001	RAL-812
793	chr3L	5926335	5926349	chr3L	5926503	5926539	BS	5	178	5.5	5.0	5.2	0.8	204	chr3L	5926335	intron	Vap-33B +	chr3L	5926437	intron	Vap-33B +	chr3L	5926539	intron	Vap-33B +	chr3L_5_5925001	chr3L_5925001	RAL-812
797	chr3L	6220913	6220944	chr3L	6230065	6230096	roo	12	9151	5.5	7.5	6.5	1.6	9183	chr3L	6220913	5` UTR	pncr008:3L +	chr3L	6225504	intergenic	not near genes	chr3L	6230096	intergenic	not near genes	chr3L_12_6225001	chr3L_6225001	RAL-812
798	chr3L	6335018	6335041	chr3L	6335487	6335512	297	7	470	4.0	6.0	5.0	1.2	494	chr3L	6335018	intron	CG13300 -	chr3L	6335265	intron	CG13300 -	chr3L	6335512	intron	CG13300 -	chr3L_7_6335001	chr3L_6335001	RAL-812
800	chr3L	6855934	6855951	chr3L	6860717	6860731	Doc	9	4783	6.5	2.5	4.5	1.6	4797	chr3L	6855934	intergenic	not near genes	chr3L	6858332	intergenic	not near genes	chr3L	6860731	intergenic	not near genes	chr3L_9_6855001	chr3L_6855001	RAL-812
801	chr3L	6887525	6887551	chr3L	6895017	6895043	roo	10	7492	2.5	5.5	4.0	2.0	7518	chr3L	6887525	intergenic	not near genes	chr3L	6891284	intergenic	not near genes	chr3L	6895043	intergenic	not near genes	chr3L_10_6890001	chr3L_6890001	RAL-812
803	chr3L	6994899	6994917	chr3L	6995510	6995528	BS	5	611	0.0	1.5	0.8	2.8	629	chr3L	6994899	intergenic	bin +	chr3L	6995214	intergenic	not near genes	chr3L	6995528	intergenic	not near genes	chr3L_5_6995001	chr3L_6995001	RAL-812
809	chr3L	7377319	7377342	chr3L	7380424	7380447	297	6	3105	0.0	4.5	2.2	1.9	3128	chr3L	7377319	intron	SMSr -	chr3L	7378883	intron	SMSr -	chr3L	7380447	intron	SMSr -	chr3L_6_7375001	chr3L_7375001	RAL-812
810	chr3L	7498754	7498774	chr3L	7503532	7503552	F-element	4	4778	4.0	1.5	2.8	1.1	4798	chr3L	7498754	5` UTR	CG8539 -	chr3L	7501153	intergenic	not near genes	chr3L	7503552	intergenic	not near genes	chr3L_4_7500001	chr3L_7500001	RAL-812
816	chr3L	7886513	7886547	chr3L	7889031	7889065	Stalker4	14	2518	2.5	0.0	1.2	6.4	2552	chr3L	7886513	intron	CG32365 +	chr3L	7887789	intron	CG32365 +	chr3L	7889065	intron	CG32365 +	chr3L_14_7885001	chr3L_7885001	RAL-812
817	chr3L	7985371	7985396	chr3L	7987690	7987724	NOF	12	2327	2.0	2.0	2.0	4.0	2353	chr3L	7985371	intron	nmo +	chr3L	7986548	intron	nmo +	chr3L	7987724	intron	nmo +	chr3L_12_7985001	chr3L_7985001	RAL-812
823	chr3L	8481802	8481806	chr3L	8490930	8490936	roo	4	9132	1.0	1.5	1.2	1.8	9134	chr3L	8481802	intron	CG43163 -	chr3L	8486369	intron	CG43163 -	chr3L	8490936	intron	CG43163 -	chr3L_4_8485001	chr3L_8485001	RAL-812
824	chr3L	8498309	8498321	chr3L	8505776	8505786	blood	4	7466	2.0	4.5	3.2	1.0	7477	chr3L	8498309	intron	CG43163 -	chr3L	8502048	intron	CG43163 -	chr3L	8505786	intron	CG43163 -	chr3L_4_8500001	chr3L_8500001	RAL-812
827	chr3L	8791274	8791284	chr3L	8796694	8796704	I-element	4	5420	4.5	5.0	4.8	0.7	5430	chr3L	8791274	exon	Fhos +	chr3L	8793989	intron	Fhos +	chr3L	8796704	intron	Fhos +	chr3L_4_8790001	chr3L_8790001	RAL-812
830	chr3L	9076931	9076960	chr3L	9084491	9084520	412	14	7560	3.0	8.0	5.5	2.2	7589	chr3L	9076931	exon	Tequila +	chr3L	9080726	intron	Tequila +	chr3L	9084520	exon	Tequila +	chr3L_14_9080001	chr3L_9080001	RAL-812
832	chr3L	9130558	9130580	chr3L	9134319	9134341	412	12	3760	5.0	5.5	5.2	1.9	3783	chr3L	9130558	intergenic	bol -	chr3L	9132450	intergenic	not near genes	chr3L	9134341	intergenic	Dhpr +	chr3L_12_9130001	chr3L_9130001	RAL-812
833	chr3L	9219243	9219275	chr3L	9219915	9219921	jockey	14	667	2.0	5.0	3.5	3.1	678	chr3L	9219243	intergenic	not near genes	chr3L	9219582	intergenic	not near genes	chr3L	9219921	intergenic	not near genes	chr3L_14_9215001	chr3L_9215001	RAL-812
836	chr3L	9270616	9270646	chr3L	9278371	9278397	roo	6	7754	2.0	1.5	1.8	2.1	7781	chr3L	9270616	intron	GluRIB +	chr3L	9274506	intron	GluRIB +	chr3L	9278397	exon	GluRIB +	chr3L_6_9270001	chr3L_9270001	RAL-812
840	chr3L	9443517	9443544	chr3L	9445304	9445331	S-element	5	1785	2.0	3.0	2.5	1.4	1814	chr3L	9443517	intron	CG33926 +	chr3L	9444424	intron	CG33926 +	chr3L	9445331	intron	CG33926 +	chr3L_5_9440001	chr3L_9440001	RAL-812
843	chr3L	9533776	9533781	chr3L	9541317	9541338	412	4	7551	5.0	7.5	6.2	0.6	7562	chr3L	9533776	intergenic	not near genes	chr3L	9537557	intergenic	not near genes	chr3L	9541338	intergenic	not near genes	chr3L_4_9535001	chr3L_9535001	RAL-812
844	chr3L	9571905	9571931	chr3L	9572253	9572279	jockey	4	348	2.0	3.0	2.5	1.1	374	chr3L	9571905	intron	CG42673 +	chr3L	9572092	intron	CG42673 +	chr3L	9572279	intron	CG42673 +	chr3L_4_9570001	chr3L_9570001	RAL-812
845	chr3L	9575910	9575942	chr3L	9580984	9581014	jockey	6	5076	7.5	1.0	4.2	1.2	5104	chr3L	9575910	intron	CG42673 +	chr3L	9578462	intron	CG42673 +	chr3L	9581014	intron	CG42673 +	chr3L_6_9575001	chr3L_9575001	RAL-812
854	chr3L	9929671	9929699	chr3L	9938451	9938479	roo	11	8776	1.5	2.5	2.0	3.7	8808	chr3L	9929671	intron	CG34356 +	chr3L	9934075	intron	CG34356 +	chr3L	9938479	intron	CG34356 +	chr3L_11_9930001	chr3L_9930001	RAL-812
863	chr3L	10414945	10414975	chr3L	10417316	10417347	Doc	9	2371	1.0	2.0	1.5	3.6	2402	chr3L	10414945	intergenic	CG12362 +	chr3L	10416146	intergenic	not near genes	chr3L	10417347	intergenic	not near genes	chr3L_9_10415001	chr3L_10415001	RAL-812
876	chr3L	11105295	11105329	chr3L	11107006	11107040	X-element	6	1711	2.5	3.0	2.8	1.6	1745	chr3L	11105295	intergenic	not near genes	chr3L	11106168	intergenic	not near genes	chr3L	11107040	exon	CG32073 -	chr3L_6_11105001	chr3L_11105001	RAL-812
879	chr3L	11329694	11329725	chr3L	11332893	11332911	jockey	5	3195	7.0	3.0	5.0	0.8	3217	chr3L	11329694	intergenic	not near genes	chr3L	11331302	intergenic	not near genes	chr3L	11332911	intergenic	not near genes	chr3L_5_11330001	chr3L_11330001	RAL-812
884	chr3L	11564798	11564812	chr3L	11572404	11572436	412	7	7614	3.5	1.0	2.2	2.2	7638	chr3L	11564798	exon	CG33267 +	chr3L	11568617	intron	CG33267 +	chr3L	11572436	exon	CG33267 +	chr3L_7_11565001	chr3L_11565001	RAL-812
888	chr3L	11723081	11723111	chr3L	11727876	11727906	Doc	10	4795	2.5	0.5	1.5	4.0	4825	chr3L	11723081	3` UTR	Bmcp +	chr3L	11725494	intron	Bmcp +	chr3L	11727906	3` UTR	Bmcp +	chr3L_10_11725001	chr3L_11725001	RAL-812
891	chr3L	11864561	11864568	chr3L	11865851	11865863	pogo	5	1293	4.0	4.0	4.0	1.0	1302	chr3L	11864561	intron	CG44837 -	chr3L	11865212	intron	CG44837 -	chr3L	11865863	intron	CG44837 -	chr3L_5_11865001	chr3L_11865001	RAL-812
892	chr3L	11864571	11864582	chr3L	11865850	11865877	pogo	6	1291	3.0	4.0	3.5	1.3	1306	chr3L	11864571	intron	CG44837 -	chr3L	11865224	intron	CG44837 -	chr3L	11865877	intron	CG44837 -	chr3L_6_11865001	chr3L_11865001	RAL-812
909	chr3L	12874927	12874958	chr3L	12877219	12877250	jockey	11	2292	0.0	1.0	0.5	7.3	2323	chr3L	12874927	intergenic	not near genes	chr3L	12876088	intergenic	not near genes	chr3L	12877250	intergenic	not near genes	chr3L_11_12875001	chr3L_12875001	RAL-812
911	chr3L	12919278	12919303	chr3L	12924747	12924776	Rt1c	8	5472	7.5	5.0	6.2	1.1	5498	chr3L	12919278	intergenic	not near genes	chr3L	12922027	intergenic	not near genes	chr3L	12924776	intergenic	not near genes	chr3L_8_12920001	chr3L_12920001	RAL-812
912	chr3L	12957791	12957810	chr3L	12962271	12962292	copia	6	4482	1.5	2.5	2.0	2.0	4501	chr3L	12957791	intergenic	not near genes	chr3L	12960042	intergenic	not near genes	chr3L	12962292	intergenic	not near genes	chr3L_6_12960001	chr3L_12960001	RAL-812
923	chr3L	13525158	13525190	chr3L	13532954	13532966	roo	9	7793	2.5	5.5	4.0	1.8	7808	chr3L	13525158	intergenic	not near genes	chr3L	13529062	intergenic	not near genes	chr3L	13532966	intergenic	not near genes	chr3L_9_13525001	chr3L_13525001	RAL-812
938	chr3L	14245569	14245591	chr3L	14245662	14245685	1360	9	94	7.0	1.0	4.0	1.8	116	chr3L	14245569	3` UTR	CR44561 -	chr3L	14245627	3` UTR	CR44561 -	chr3L	14245685	3` UTR	CR44561 -	chr3L_9_14245001	chr3L_14245001	RAL-812
939	chr3L	14295980	14296005	chr3L	14296466	14296483	roo	8	484	9.5	4.0	6.8	1.0	503	chr3L	14295980	intron	fz +	chr3L	14296232	intron	fz +	chr3L	14296483	intron	fz +	chr3L_8_14295001	chr3L_14295001	RAL-812
944	chr3L	14468451	14468469	chr3L	14473657	14473675	copia	4	5206	2.5	1.5	2.0	1.3	5224	chr3L	14468451	intron	bbg -	chr3L	14471063	intron	bbg -	chr3L	14473675	intron	bbg -	chr3L_4_14470001	chr3L_14470001	RAL-812
950	chr3L	14721186	14721208	chr3L	14723028	14723039	Rt1c	7	1839	2.5	2.5	2.5	2.0	1853	chr3L	14721186	intron	ome +	chr3L	14722112	intron	ome +	chr3L	14723039	intron	ome +	chr3L_7_14720001	chr3L_14720001	RAL-812
957	chr3L	15085055	15085063	chr3L	15086221	15086227	1360	4	1165	4.5	4.5	4.5	0.7	1172	chr3L	15085055	intron	cp309 -	chr3L	15085641	intron	cp309 -	chr3L	15086227	intron	cp309 -	chr3L_4_15085001	chr3L_15085001	RAL-812
972	chr3L	15899232	15899263	chr3L	15899790	15899801	jockey	4	542	2.0	4.5	3.2	1.0	569	chr3L	15899232	intergenic	pHCl -	chr3L	15899516	intergenic	pHCl -	chr3L	15899801	intergenic	sff -	chr3L_4_15895001	chr3L_15895001	RAL-812
975	chr3L	16184087	16184119	chr3L	16188931	16188949	X-element	16	4843	1.0	2.0	1.5	6.4	4862	chr3L	16184087	intergenic	not near genes	chr3L	16186518	intergenic	not near genes	chr3L	16188949	intergenic	not near genes	chr3L_16_16185001	chr3L_16185001	RAL-812
979	chr3L	16493985	16494010	chr3L	16494501	16494501	jockey	11	514	6.0	7.5	6.8	1.4	516	chr3L	16493985	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494243	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494501	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_11_16490001	chr3L_16490001	RAL-812
990	chr3L	16945728	16945761	chr3L	16954880	16954914	roo	19	9147	2.5	3.0	2.8	5.0	9186	chr3L	16945728	exon	Obp73a +	chr3L	16950321	intergenic	not near genes	chr3L	16954914	5` UTR	Nc73EF +	chr3L_19_16950001	chr3L_16950001	RAL-812
992	chr3L	17085013	17085033	chr3L	17094162	17094182	roo	7	9149	1.5	4.5	3.0	1.8	9169	chr3L	17085013	intron	Rbp6 -	chr3L	17089598	intron	Rbp6 -	chr3L	17094182	intron	Rbp6 -	chr3L_7_17085001	chr3L_17085001	RAL-812
1004	chr3L	17516981	17516999	chr3L	17524539	17524540	412	5	7554	5.5	4.5	5.0	0.8	7559	chr3L	17516981	intron	CG7564 +	chr3L	17520760	intron	CG7564 +	chr3L	17524540	3` UTR	CG7564 +	chr3L_5_17520001	chr3L_17520001	RAL-812
1035	chr3L	18772408	18772437	chr3L	18781088	18781118	roo	15	8681	1.0	3.0	2.0	5.0	8710	chr3L	18772408	intron	ftz-f1 -	chr3L	18776763	intron	ftz-f1 -	chr3L	18781118	intron	ftz-f1 -	chr3L_15_18775001	chr3L_18775001	RAL-812
1037	chr3L	18833785	18833814	chr3L	18834949	18834978	1360	5	1164	3.0	2.5	2.8	1.3	1193	chr3L	18833785	intron	Indy -	chr3L	18834382	intron	Indy -	chr3L	18834978	intron	Indy -	chr3L_5_18830001	chr3L_18830001	RAL-812
1041	chr3L	19008845	19008871	chr3L	19009183	19009209	jockey	12	337	1.5	6.0	3.8	2.5	364	chr3L	19008845	intron	nkd -	chr3L	19009027	intron	nkd -	chr3L	19009209	intron	nkd -	chr3L_12_19005001	chr3L_19005001	RAL-812
1043	chr3L	19115646	19115670	chr3L	19115826	19115850	BS	12	179	6.0	3.5	4.8	2.1	204	chr3L	19115646	intron	CG14082 -	chr3L	19115748	intron	CG14082 -	chr3L	19115850	intron	CG14082 -	chr3L_12_19115001	chr3L_19115001	RAL-812
1044	chr3L	19117052	19117076	chr3L	19124487	19124523	mdg1	11	7442	3.5	3.5	3.5	2.4	7471	chr3L	19117052	intron	CG14082 -	chr3L	19120788	intron	CG14082 -	chr3L	19124523	intron	CG14082 -	chr3L_11_19120001	chr3L_19120001	RAL-812
1046	chr3L	19208056	19208086	chr3L	19209430	19209460	Doc	13	1373	4.0	1.0	2.5	3.7	1404	chr3L	19208056	intron	fz2 -	chr3L	19208758	intron	fz2 -	chr3L	19209460	intron	fz2 -	chr3L_13_19205001	chr3L_19205001	RAL-812
1052	chr3L	19848500	19848533	chr3L	19857690	19857723	roo	8	9190	4.0	2.5	3.2	1.9	9223	chr3L	19848500	intron	Papss +	chr3L	19853112	intron	Papss +	chr3L	19857723	intron	Papss +	chr3L_8_19850001	chr3L_19850001	RAL-812
1053	chr3L	19861824	19861850	chr3L	19863612	19863638	S-element	8	1788	1.0	2.5	1.8	2.9	1814	chr3L	19861824	5` UTR	CR45433 +	chr3L	19862731	intergenic	not near genes	chr3L	19863638	intergenic	not near genes	chr3L_8_19860001	chr3L_19860001	RAL-812
1057	chr3L	20113657	20113679	chr3L	20122914	20122936	roo	5	9257	1.0	0.5	0.8	2.8	9279	chr3L	20113657	intergenic	not near genes	chr3L	20118296	intergenic	not near genes	chr3L	20122936	intergenic	not near genes	chr3L_5_20115001	chr3L_20115001	RAL-812
1065	chr3L	20257334	20257361	chr3L	20258454	20258481	pogo	6	1120	1.5	3.0	2.2	1.9	1147	chr3L	20257334	intron	rdgC +	chr3L	20257908	intron	rdgC +	chr3L	20258481	intron	rdgC +	chr3L_6_20255001	chr3L_20255001	RAL-812
1067	chr3L	20476759	20476784	chr3L	20484357	20484383	springer	5	7599	2.0	0.0	1.0	2.5	7624	chr3L	20476759	3` UTR	isoQC +	chr3L	20480571	intergenic	not near genes	chr3L	20484383	3` UTR	ZnT77C -	chr3L_5_20480001	chr3L_20480001	RAL-812
1070	chr3L	20590064	20590097	chr3L	20590602	20590634	412	7	530	1.5	1.0	1.2	3.2	570	chr3L	20590064	intergenic	not near genes	chr3L	20590349	intergenic	not near genes	chr3L	20590634	intergenic	not near genes	chr3L_7_20590001	chr3L_20590001	RAL-812
1073	chr3L	20821295	20821309	chr3L	20824764	20824778	NOF	6	3468	1.5	5.5	3.5	1.3	3483	chr3L	20821295	intron	Pka-R1 +	chr3L	20823036	intron	Pka-R1 +	chr3L	20824778	intron	Pka-R1 +	chr3L_6_20820001	chr3L_20820001	RAL-812
1075	chr3L	21014918	21014946	chr3L	21023397	21023397	Tirant	7	8471	5.0	2.0	3.5	1.6	8479	chr3L	21014918	intron	skd -	chr3L	21019158	intron	skd -	chr3L	21023397	intron	skd -	chr3L_7_21015001	chr3L_21015001	RAL-812
1077	chr3L	21151862	21151897	chr3L	21156946	21156981	flea	8	5084	1.0	0.0	0.5	5.3	5119	chr3L	21151862	intron	Ac78C -	chr3L	21154422	intron	Ac78C -	chr3L	21156981	intron	Ac78C -	chr3L_8_21150001	chr3L_21150001	RAL-812
1079	chr3L	21243760	21243766	chr3L	21251322	21251329	412	4	7563	2.0	7.5	4.8	0.7	7569	chr3L	21243760	intron	Eip78C +	chr3L	21247544	intron	Eip78C +	chr3L	21251329	intron	Eip78C +	chr3L_4_21245001	chr3L_21245001	RAL-812
1080	chr3L	21306159	21306180	chr3L	21315318	21315339	roo	5	9159	1.5	1.0	1.2	2.3	9180	chr3L	21306159	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310749	intron	Pc -	chr3L	21315339	3` UTR	Pc -	chr3L_5_21310001	chr3L_21310001	RAL-812
1087	chr3L	21749317	21749353	chr3L	21754477	21754482	Doc	10	5151	3.0	5.0	4.0	2.0	5165	chr3L	21749317	intron	Syn1 -	chr3L	21751900	intron	Syn1 -	chr3L	21754482	intron	Syn1 -	chr3L_10_21750001	chr3L_21750001	RAL-812
1103	chr3L	22099687	22099704	chr3L	22105872	22105890	3S18	6	6186	3.0	1.0	2.0	2.0	6203	chr3L	22099687	intergenic	not near genes	chr3L	22102788	intergenic	not near genes	chr3L	22105890	intergenic	not near genes	chr3L_6_22100001	chr3L_22100001	RAL-812
1109	chr3L	22555768	22555803	chr3L	22563238	22563243	blood	8	7461	0.5	3.0	1.8	2.9	7475	chr3L	22555768	intergenic	not near genes	chr3L	22559506	intergenic	not near genes	chr3L	22563243	intergenic	not near genes	chr3L_8_22555001	chr3L_22555001	RAL-812
1112	chr3L	22577620	22577647	chr3L	22582408	22582435	Doc	8	4786	1.5	5.5	3.5	1.8	4815	chr3L	22577620	intergenic	not near genes	chr3L	22580028	intergenic	not near genes	chr3L	22582435	3` UTR	CG14459 -	chr3L_8_22580001	chr3L_22580001	RAL-812
1113	chr3L	22617191	22617215	chr3L	22624643	22624667	blood	7	7451	1.5	0.5	1.0	3.5	7476	chr3L	22617191	intron	CG14459 -	chr3L	22620929	intron	CG14459 -	chr3L	22624667	intron	CG14459 -	chr3L_7_22620001	chr3L_22620001	RAL-812
1118	chr3L	22865984	22866008	chr3L	22867117	22867141	Doc	4	1133	2.0	2.5	2.2	1.2	1157	chr3L	22865984	intron	CG33170 +	chr3L	22866562	intron	CG33170 +	chr3L	22867141	intron	CG33170 +	chr3L_4_22865001	chr3L_22865001	RAL-812
1122	chr3L	24168792	24168820	chr3L	24176115	24176146	ZAM	6	7315	1.5	5.0	3.2	1.4	7354	chr3L	24168792	intron	Snap25 +	chr3L	24172469	intron	Snap25 +	chr3L	24176146	intron	Snap25 +	chr3L_6_24170001	chr3L_24170001	RAL-812
1127	chr3R	4206071	4206102	chr3R	4211646	4211677	mdg3	7	5574	0.5	1.0	0.8	3.9	5606	chr3R	4206071	intron	CG14636 -	chr3R	4208874	intron	CG14636 -	chr3R	4211677	intron	CG14636 -	chr3R_7_4205001	chr3R_4205001	RAL-812
1129	chr3R	4366756	4366790	chr3R	4375139	4375152	roo	5	8379	1.0	0.0	0.5	3.3	8396	chr3R	4366756	3` UTR	CG1090 +	chr3R	4370954	intergenic	not near genes	chr3R	4375152	5` UTR	CR44922 +	chr3R_5_4370001	chr3R_4370001	RAL-812
1130	chr3R	4408410	4408438	chr3R	4412714	4412740	Juan	7	4304	3.0	2.0	2.5	2.0	4330	chr3R	4408410	intron	CG32944 -	chr3R	4410575	intron	CG32944 -	chr3R	4412740	intron	CG32944 -	chr3R_7_4410001	chr3R_4410001	RAL-812
1132	chr3R	4753242	4753259	chr3R	4757545	4757558	F-element	8	4302	11.0	8.0	9.5	0.8	4316	chr3R	4753242	intron,intron	atms +,CG44098 -	chr3R	4755400	intron,intron	atms +,CG44098 -	chr3R	4757558	intron,exon	atms +,CG44098 -	chr3R_8_4755001	chr3R_4755001	RAL-812
1135	chr3R	4887480	4887509	chr3R	4894854	4894869	rover	4	7372	3.5	4.0	3.8	0.8	7389	chr3R	4887480	intergenic	not near genes	chr3R	4891174	intergenic	not near genes	chr3R	4894869	intergenic	not near genes	chr3R_4_4890001	chr3R_4890001	RAL-812
1138	chr3R	5045844	5045871	chr3R	5052946	5052973	HMS-Beagle	5	7102	3.5	0.5	2.0	1.7	7129	chr3R	5045844	intron	CR43635 -	chr3R	5049408	intergenic	not near genes	chr3R	5052973	intergenic	CR45588 -	chr3R_5_5045001	chr3R_5045001	RAL-812
1139	chr3R	5067980	5068012	chr3R	5073497	5073529	mdg3	6	5517	1.5	2.0	1.8	2.1	5549	chr3R	5067980	intergenic	not near genes	chr3R	5070754	intergenic	not near genes	chr3R	5073529	intergenic	not near genes	chr3R_6_5070001	chr3R_5070001	RAL-812
1144	chr3R	5338396	5338427	chr3R	5343573	5343604	Rt1c	12	5177	3.0	4.5	3.8	2.5	5208	chr3R	5338396	intron	mtd -	chr3R	5341000	intron	mtd -	chr3R	5343604	intron	mtd -	chr3R_12_5340001	chr3R_5340001	RAL-812
1145	chr3R	5445965	5445988	chr3R	5452425	5452448	Burdock	7	6460	0.5	4.0	2.2	2.2	6483	chr3R	5445965	intron	CG14669 +	chr3R	5449206	intron	CG14669 +	chr3R	5452448	intron	CG14669 +	chr3R_7_5445001	chr3R_5445001	RAL-812
1146	chr3R	5746018	5746045	chr3R	5746257	5746286	pogo	5	240	1.0	3.5	2.2	1.6	268	chr3R	5746018	3` UTR	Madm +	chr3R	5746152	3` UTR	Madm +	chr3R	5746286	3` UTR	Madm +	chr3R_5_5745001	chr3R_5745001	RAL-812
1148	chr3R	5809128	5809144	chr3R	5809369	5809385	pogo	8	241	3.5	4.5	4.0	1.6	257	chr3R	5809128	3` UTR	CG11000 +	chr3R	5809256	3` UTR	CG11000 +	chr3R	5809385	3` UTR	CG11000 +	chr3R_8_5805001	chr3R_5805001	RAL-812
1149	chr3R	5822380	5822413	chr3R	5823547	5823580	1360	8	1167	4.5	3.0	3.8	1.7	1200	chr3R	5822380	3` UTR	CG2023 -	chr3R	5822980	3` UTR	CG2023 -	chr3R	5823580	3` UTR	CG2023 -	chr3R_8_5820001	chr3R_5820001	RAL-812
1150	chr3R	5927562	5927591	chr3R	5927802	5927831	pogo	9	238	4.0	3.0	3.5	2.0	269	chr3R	5927562	intron	CG34113 -	chr3R	5927696	intron	CG34113 -	chr3R	5927831	intron	CG34113 -	chr3R_9_5925001	chr3R_5925001	RAL-812
1152	chr3R	6015979	6015994	chr3R	6024441	6024454	Tirant	5	8469	2.5	3.0	2.8	1.3	8475	chr3R	6015979	intergenic	not near genes	chr3R	6020216	intergenic	not near genes	chr3R	6024454	intergenic	not near genes	chr3R_5_6020001	chr3R_6020001	RAL-812
1156	chr3R	6158510	6158538	chr3R	6167093	6167118	Tirant	5	8582	6.5	4.0	5.2	0.8	8608	chr3R	6158510	intergenic	not near genes	chr3R	6162814	intergenic	not near genes	chr3R	6167118	intergenic	CG1077 +	chr3R_5_6160001	chr3R_6160001	RAL-812
1158	chr3R	6510025	6510033	chr3R	6515106	6515114	jockey	4	5081	1.5	1.0	1.2	1.8	5089	chr3R	6510025	intergenic	not near genes	chr3R	6512570	intergenic	not near genes	chr3R	6515114	intergenic	not near genes	chr3R_4_6510001	chr3R_6510001	RAL-812
1161	chr3R	6737504	6737531	chr3R	6739291	6739317	Doc	9	1786	1.5	5.0	3.2	2.1	1813	chr3R	6737504	intron	pb -	chr3R	6738410	intron	pb -	chr3R	6739317	intron	pb -	chr3R_9_6735001	chr3R_6735001	RAL-812
1174	chr3R	7694581	7694589	chr3R	7713642	7713650	invader3	5	19061	2.0	0.5	1.2	2.3	19069	chr3R	7694581	3` UTR	Nlg1 +	chr3R	7704116	intergenic	not near genes	chr3R	7713650	intergenic	not near genes	chr3R_5_7700001	chr3R_7700001	RAL-812
1175	chr3R	7729466	7729487	chr3R	7737404	7737423	Stalker2	6	7938	3.5	3.0	3.2	1.4	7957	chr3R	7729466	intergenic	not near genes	chr3R	7733444	intergenic	not near genes	chr3R	7737423	intergenic	not near genes	chr3R_6_7730001	chr3R_7730001	RAL-812
1176	chr3R	7849644	7849675	chr3R	7850811	7850842	1360	10	1166	1.5	2.5	2.0	3.3	1198	chr3R	7849644	intron	CG34384 +	chr3R	7850243	intron	CG34384 +	chr3R	7850842	intron	CG34384 +	chr3R_10_7850001	chr3R_7850001	RAL-812
1178	chr3R	8094410	8094430	chr3R	8099715	8099735	Transpac	4	5305	3.5	2.0	2.8	1.1	5325	chr3R	8094410	intron	CG7900 +	chr3R	8097072	intron	CG7900 +	chr3R	8099735	intron	CG7900 +	chr3R_4_8095001	chr3R_8095001	RAL-812
1179	chr3R	8101763	8101792	chr3R	8104847	8104876	G2	8	3080	4.0	1.5	2.8	2.1	3113	chr3R	8101763	exon	CG7900 +	chr3R	8103320	intron	CG7900 +	chr3R	8104876	3` UTR	CG7900 +	chr3R_8_8100001	chr3R_8100001	RAL-812
1182	chr3R	8403009	8403034	chr3R	8412175	8412190	roo	10	9162	4.5	6.5	5.5	1.5	9181	chr3R	8403009	intron	CG45263 -	chr3R	8407600	intron	CG45263 -	chr3R	8412190	intron	CG45263 -	chr3R_10_8405001	chr3R_8405001	RAL-812
1184	chr3R	8570477	8570510	chr3R	8575113	8575146	HMS-Beagle	12	4633	4.5	4.0	4.2	2.3	4669	chr3R	8570477	intergenic	not near genes	chr3R	8572812	intergenic	not near genes	chr3R	8575146	intergenic	not near genes	chr3R_12_8570001	chr3R_8570001	RAL-812
1185	chr3R	8601783	8601800	chr3R	8610929	8610946	roo	9	9151	4.5	1.5	3.0	2.2	9163	chr3R	8601783	intron	5-HT2B +	chr3R	8606364	intron	5-HT2B +	chr3R	8610946	intron	5-HT2B +	chr3R_9_8605001	chr3R_8605001	RAL-812
1186	chr3R	8707355	8707384	chr3R	8709795	8709825	jockey	16	2440	4.5	3.0	3.8	3.3	2470	chr3R	8707355	intergenic	not near genes	chr3R	8708590	intergenic	not near genes	chr3R	8709825	intergenic	not near genes	chr3R_16_8705001	chr3R_8705001	RAL-812
1192	chr3R	9319587	9319609	chr3R	9320013	9320044	jockey	8	434	1.5	3.5	2.5	2.3	457	chr3R	9319587	intron	CG8861 -	chr3R	9319816	intron	CG8861 -	chr3R	9320044	intron	CG8861 -	chr3R_8_9315001	chr3R_9315001	RAL-812
1206	chr3R	10231791	10231814	chr3R	10237366	10237375	mdg3	5	5573	1.5	1.0	1.2	2.3	5584	chr3R	10231791	intron	CG42795 +	chr3R	10234583	intron	CG42795 +	chr3R	10237375	intron	CG42795 +	chr3R_5_10230001	chr3R_10230001	RAL-812
1219	chr3R	11379240	11379266	chr3R	11388395	11388421	roo	8	9154	3.0	1.0	2.0	2.7	9181	chr3R	11379240	intron	pros +	chr3R	11383830	intron	pros +	chr3R	11388421	intron	pros +	chr3R_8_11380001	chr3R_11380001	RAL-812
1228	chr3R	11841073	11841097	chr3R	11846264	11846288	BS	5	5190	2.5	7.5	5.0	0.8	5215	chr3R	11841073	intron	CG6959 -	chr3R	11843680	intron	CG6959 -	chr3R	11846288	intron	CG6959 -	chr3R_5_11840001	chr3R_11840001	RAL-812
1244	chr3R	13314105	13314128	chr3R	13318893	13318916	Doc	6	4788	2.5	2.5	2.5	1.7	4811	chr3R	13314105	intergenic	not near genes	chr3R	13316510	intergenic	not near genes	chr3R	13318916	intergenic	CG45080 -	chr3R_6_13315001	chr3R_13315001	RAL-812
1256	chr3R	14021645	14021662	chr3R	14023470	14023487	S-element	4	1825	4.0	4.5	4.2	0.8	1842	chr3R	14021645	intron	rdx -	chr3R	14022566	intron	rdx -	chr3R	14023487	intron	rdx -	chr3R_4_14020001	chr3R_14020001	RAL-812
1285	chr3R	15041438	15041456	chr3R	15045206	15045224	Doc	4	3768	0.5	3.5	2.0	1.3	3786	chr3R	15041438	intergenic	not near genes	chr3R	15043331	intergenic	not near genes	chr3R	15045224	intergenic	not near genes	chr3R_4_15040001	chr3R_15040001	RAL-812
1287	chr3R	15132059	15132078	chr3R	15135119	15135138	Juan	4	3060	5.5	8.5	7.0	0.5	3079	chr3R	15132059	intergenic	CG42788 -	chr3R	15133598	intergenic	not near genes	chr3R	15135138	3` UTR	CG6912 -	chr3R_4_15130001	chr3R_15130001	RAL-812
1288	chr3R	15162552	15162559	chr3R	15167320	15167327	F-element	4	4768	6.0	0.0	3.0	1.0	4775	chr3R	15162552	intron	Gyc88E +	chr3R	15164940	intron	Gyc88E +	chr3R	15167327	intron	Gyc88E +	chr3R_4_15160001	chr3R_15160001	RAL-812
1291	chr3R	15601165	15601194	chr3R	15608687	15608716	412	16	7520	7.5	2.0	4.8	2.8	7551	chr3R	15601165	intergenic	not near genes	chr3R	15604940	intergenic	not near genes	chr3R	15608716	intergenic	not near genes	chr3R_16_15600001	chr3R_15600001	RAL-812
1292	chr3R	15618745	15618759	chr3R	15626218	15626233	blood	7	7473	0.5	3.5	2.0	2.3	7488	chr3R	15618745	intergenic	not near genes	chr3R	15622489	intergenic	not near genes	chr3R	15626233	intergenic	not near genes	chr3R_7_15620001	chr3R_15620001	RAL-812
1302	chr3R	16756323	16756354	chr3R	16762510	16762545	diver	12	6189	3.0	1.0	2.0	4.0	6222	chr3R	16756323	intron	bxd -	chr3R	16759434	intron	bxd -	chr3R	16762545	intron	bxd -	chr3R_12_16755001	chr3R_16755001	RAL-812
1308	chr3R	17294662	17294686	chr3R	17295090	17295114	BS	6	428	0.5	0.0	0.2	5.0	452	chr3R	17294662	intergenic	not near genes	chr3R	17294888	intergenic	not near genes	chr3R	17295114	intergenic	not near genes	chr3R_6_17290001	chr3R_17290001	RAL-812
1309	chr3R	17346698	17346717	chr3R	17348252	17348280	F-element	6	1562	1.0	5.0	3.0	1.5	1582	chr3R	17346698	intron	beat-IIa -	chr3R	17347489	intron	beat-IIa -	chr3R	17348280	intron	beat-IIa -	chr3R_6_17345001	chr3R_17345001	RAL-812
1316	chr3R	17591287	17591313	chr3R	17591723	17591749	F-element	7	434	7.0	3.5	5.2	1.1	462	chr3R	17591287	intergenic	not near genes	chr3R	17591518	intergenic	not near genes	chr3R	17591749	intergenic	not near genes	chr3R_7_17590001	chr3R_17590001	RAL-812
1322	chr3R	17925851	17925887	chr3R	17927318	17927354	hobo	6	1465	4.0	6.0	5.0	1.0	1503	chr3R	17925851	intron	cpo +	chr3R	17926602	intron	cpo +	chr3R	17927354	intron	cpo +	chr3R_6_17925001	chr3R_17925001	RAL-812
1331	chr3R	18606505	18606522	chr3R	18610736	18610754	F-element	4	4231	1.5	3.0	2.2	1.2	4249	chr3R	18606505	intron,intron	qin +,CG14304 -	chr3R	18608630	intron,intron	qin +,CG14304 -	chr3R	18610754	intron,intron	qin +,CG14304 -	chr3R_4_18605001	chr3R_18605001	RAL-812
1341	chr3R	19193005	19193009	chr3R	19197284	19197309	F-element	4	4291	0.0	5.0	2.5	1.1	4304	chr3R	19193005	intron	CG31475 +	chr3R	19195157	intron	CG31475 +	chr3R	19197309	intron	CG31475 +	chr3R_4_19195001	chr3R_19195001	RAL-812
1349	chr3R	20156703	20156718	chr3R	20165860	20165888	roo	4	9162	2.5	3.5	3.0	1.0	9185	chr3R	20156703	intergenic	not near genes	chr3R	20161296	intergenic	not near genes	chr3R	20165888	intergenic	not near genes	chr3R_4_20160001	chr3R_20160001	RAL-812
1352	chr3R	20331000	20331009	chr3R	20331486	20331495	roo	4	486	3.5	0.5	2.0	1.3	495	chr3R	20331000	intergenic	Sirt2 +	chr3R	20331248	intergenic	Sirt2 +	chr3R	20331495	intergenic	not near genes	chr3R_4_20330001	chr3R_20330001	RAL-812
1361	chr3R	21141680	21141706	chr3R	21150155	21150187	Tirant	11	8475	2.5	4.0	3.2	2.6	8507	chr3R	21141680	intron	SNF4Agamma +	chr3R	21145934	intron	SNF4Agamma +	chr3R	21150187	intron	SNF4Agamma +	chr3R_11_21145001	chr3R_21145001	RAL-812
1368	chr3R	21609002	21609040	chr3R	21611636	21611666	NOF	8	2629	1.5	5.5	3.5	1.8	2664	chr3R	21609002	intron	InR -	chr3R	21610334	intron	InR -	chr3R	21611666	intron	InR -	chr3R_8_21610001	chr3R_21610001	RAL-812
1371	chr3R	21761140	21761152	chr3R	21768509	21768543	mdg1	10	7386	2.5	2.5	2.5	2.9	7403	chr3R	21761140	exon	CG42335 +	chr3R	21764842	intron	CG42335 +	chr3R	21768543	exon	CG42335 +	chr3R_10_21760001	chr3R_21760001	RAL-812
1384	chr3R	22450543	22450572	chr3R	22453182	22453211	NOF	8	2639	1.0	7.0	4.0	1.6	2668	chr3R	22450543	intron	CG34376 +	chr3R	22451877	intron	CG34376 +	chr3R	22453211	intron	CG34376 +	chr3R_8_22450001	chr3R_22450001	RAL-812
1396	chr3R	22881209	22881220	chr3R	22884908	22884924	Doc	4	3704	2.0	1.0	1.5	1.6	3715	chr3R	22881209	intergenic	not near genes	chr3R	22883066	intergenic	not near genes	chr3R	22884924	intergenic	not near genes	chr3R_4_22880001	chr3R_22880001	RAL-812
1410	chr3R	23684708	23684715	chr3R	23685185	23685185	roo	4	479	7.0	3.5	5.2	0.6	477	chr3R	23684708	intron	CG18754 +	chr3R	23684946	intron	CG18754 +	chr3R	23685185	exon	CG18754 +	chr3R_4_23680001	chr3R_23680001	RAL-812
1415	chr3R	24072089	24072116	chr3R	24072527	24072552	jockey	9	434	8.5	5.5	7.0	1.1	463	chr3R	24072089	intron	4EHP -	chr3R	24072320	intron	4EHP -	chr3R	24072552	intron	4EHP -	chr3R_9_24070001	chr3R_24070001	RAL-812
1416	chr3R	24076915	24076947	chr3R	24078382	24078410	hobo	6	1463	5.0	3.5	4.2	1.2	1495	chr3R	24076915	intron	4EHP -	chr3R	24077662	intron	4EHP -	chr3R	24078410	intron	4EHP -	chr3R_6_24075001	chr3R_24075001	RAL-812
1417	chr3R	24207218	24207246	chr3R	24212294	24212322	flea	11	5075	5.0	5.0	5.0	1.8	5104	chr3R	24207218	intron	twin -	chr3R	24209770	intron	twin -	chr3R	24212322	intron	twin -	chr3R_11_24205001	chr3R_24205001	RAL-812
1420	chr3R	24493277	24493304	chr3R	24493506	24493533	BS	8	228	1.5	3.0	2.2	2.5	256	chr3R	24493277	intergenic	not near genes	chr3R	24493405	intergenic	not near genes	chr3R	24493533	intergenic	not near genes	chr3R_8_24490001	chr3R_24490001	RAL-812
1423	chr3R	24730091	24730119	chr3R	24732469	24732495	Doc	16	2376	4.0	0.5	2.2	5.0	2404	chr3R	24730091	intron	tok +	chr3R	24731293	intron	tok +	chr3R	24732495	intron	tok +	chr3R_16_24730001	chr3R_24730001	RAL-812
1426	chr3R	24927126	24927144	chr3R	24931917	24931935	Doc	4	4791	3.5	6.5	5.0	0.7	4809	chr3R	24927126	intergenic	Trf4-2 +	chr3R	24929530	intergenic	not near genes	chr3R	24931935	intergenic	CG11771 +	chr3R_4_24925001	chr3R_24925001	RAL-812
1440	chr3R	25832704	25832723	chr3R	25841875	25841905	roo	9	9180	2.0	3.5	2.8	2.4	9201	chr3R	25832704	exon	alpha4GT2 +	chr3R	25837304	intron	alpha4GT2 +	chr3R	25841905	exon	alpha4GT2 +	chr3R_9_25835001	chr3R_25835001	RAL-812
1447	chr3R	26376322	26376357	chr3R	26385482	26385516	roo	8	9158	3.5	0.5	2.0	2.7	9194	chr3R	26376322	intergenic	not near genes	chr3R	26380919	intergenic	not near genes	chr3R	26385516	intergenic	not near genes	chr3R_8_26380001	chr3R_26380001	RAL-812
1449	chr3R	26558325	26558358	chr3R	26565638	26565670	Stalker4	8	7309	2.0	4.0	3.0	2.0	7345	chr3R	26558325	intron	scrib +	chr3R	26561998	intron	scrib +	chr3R	26565670	intron	scrib +	chr3R_8_26560001	chr3R_26560001	RAL-812
1451	chr3R	26642728	26642757	chr3R	26643121	26643151	jockey	8	394	6.5	1.0	3.8	1.7	423	chr3R	26642728	intergenic	not near genes	chr3R	26642940	intergenic	not near genes	chr3R	26643151	intergenic	not near genes	chr3R_8_26640001	chr3R_26640001	RAL-812
1455	chr3R	27007419	27007436	chr3R	27016554	27016571	roo	4	9135	0.5	1.5	1.0	2.0	9152	chr3R	27007419	intron	RYa-R +	chr3R	27011995	intron	RYa-R +	chr3R	27016571	intron	RYa-R +	chr3R_4_27010001	chr3R_27010001	RAL-812
1456	chr3R	27140518	27140548	chr3R	27148127	27148157	412	15	7609	4.0	7.5	5.8	2.2	7639	chr3R	27140518	intron	CG6051 -	chr3R	27144338	intron	CG6051 -	chr3R	27148157	intron	CG6051 -	chr3R_15_27140001	chr3R_27140001	RAL-812
1458	chr3R	27342804	27342817	chr3R	27351384	27351398	Tirant	4	8580	5.0	5.0	5.0	0.7	8594	chr3R	27342804	intron	CG42534 +	chr3R	27347101	intron	CG42534 +	chr3R	27351398	intron	CG42534 +	chr3R_4_27345001	chr3R_27345001	RAL-812
1465	chr3R	27725566	27725580	chr3R	27731008	27731022	I-element	10	5442	3.5	1.5	2.5	2.9	5456	chr3R	27725566	intergenic	not near genes	chr3R	27728294	intergenic	not near genes	chr3R	27731022	intergenic	not near genes	chr3R_10_27725001	chr3R_27725001	RAL-812
1470	chr3R	27856761	27856786	chr3R	27858244	27858269	hopper2	10	1483	3.0	2.5	2.8	2.6	1508	chr3R	27856761	intron	CG34353 -	chr3R	27857515	intron	CG34353 -	chr3R	27858269	intron	CG34353 -	chr3R_10_27855001	chr3R_27855001	RAL-812
1474	chr3R	28068492	28068530	chr3R	28073934	28073972	I-element	8	5442	1.5	3.0	2.2	2.5	5480	chr3R	28068492	intron	CG34362 +	chr3R	28071232	intron	CG34362 +	chr3R	28073972	intron	CG34362 +	chr3R_8_28070001	chr3R_28070001	RAL-812
1477	chr3R	28173676	28173687	chr3R	28181106	28181117	mdg1	4	7430	0.0	2.5	1.2	1.8	7441	chr3R	28173676	intron	CG34354 +	chr3R	28177396	intron	CG34354 +	chr3R	28181117	intron	CG34354 +	chr3R_4_28175001	chr3R_28175001	RAL-812
1478	chr3R	28253343	28253371	chr3R	28255846	28255881	jockey	15	2509	5.0	3.0	4.0	3.0	2538	chr3R	28253343	intergenic	not near genes	chr3R	28254612	intergenic	not near genes	chr3R	28255881	intergenic	not near genes	chr3R_15_28250001	chr3R_28250001	RAL-812
1487	chr3R	28792867	28792902	chr3R	28797962	28797987	jockey	8	5092	1.0	3.5	2.2	2.5	5120	chr3R	28792867	intergenic	not near genes	chr3R	28795427	intergenic	not near genes	chr3R	28797987	intergenic	not near genes	chr3R_8_28795001	chr3R_28795001	RAL-812
1491	chr3R	29079386	29079411	chr3R	29080757	29080783	NOF	10	1372	3.5	2.5	3.0	2.5	1397	chr3R	29079386	intron	CG11873 +	chr3R	29080084	intron	CG11873 +	chr3R	29080783	intron	CG11873 +	chr3R_10_29080001	chr3R_29080001	RAL-812
1503	chr3R	29406618	29406639	chr3R	29407903	29407924	jockey	6	1285	4.5	4.0	4.2	1.2	1306	chr3R	29406618	intron	Ptp99A +	chr3R	29407271	intron	Ptp99A +	chr3R	29407924	intron	Ptp99A +	chr3R_6_29405001	chr3R_29405001	RAL-812
1513	chr3R	29738263	29738298	chr3R	29739729	29739754	hobo	13	1466	0.5	3.5	2.0	4.3	1491	chr3R	29738263	intergenic	CG1969 +,CG7598 +	chr3R	29739008	intron	CG1969 +	chr3R	29739754	5` UTR	CG1969 +	chr3R_13_29735001	chr3R_29735001	RAL-812
1516	chr3R	29882022	29882050	chr3R	29891179	29891207	roo	8	9157	5.0	5.0	5.0	1.3	9185	chr3R	29882022	intron	CG31038 +	chr3R	29886614	intron	CG31038 +	chr3R	29891207	intron	CG31038 +	chr3R_8_29885001	chr3R_29885001	RAL-812
1522	chr3R	30084867	30084873	chr3R	30086334	30086340	hobo	5	1467	0.0	5.0	2.5	1.4	1473	chr3R	30084867	intron	sima +	chr3R	30085604	intron	sima +	chr3R	30086340	intron	sima +	chr3R_5_30085001	chr3R_30085001	RAL-812
1523	chr3R	30084875	30084883	chr3R	30086332	30086350	hobo	5	1464	0.0	5.0	2.5	1.4	1475	chr3R	30084875	intron	sima +	chr3R	30085612	intron	sima +	chr3R	30086350	intron	sima +	chr3R_5_30085001	chr3R_30085001	RAL-812
1528	chr3R	30375540	30375572	chr3R	30383165	30383197	412	6	7624	0.5	3.5	2.0	2.0	7657	chr3R	30375540	intergenic	not near genes	chr3R	30379368	intergenic	not near genes	chr3R	30383197	intergenic	not near genes	chr3R_6_30375001	chr3R_30375001	RAL-812
1529	chr3R	30396224	30396243	chr3R	30404490	30404509	roo	4	8266	3.5	3.5	3.5	0.9	8285	chr3R	30396224	intergenic	not near genes	chr3R	30400366	intergenic	not near genes	chr3R	30404509	5` UTR	CR45570 +	chr3R_4_30400001	chr3R_30400001	RAL-812
1531	chr3R	30480472	30480510	chr3R	30482940	30482978	jockey	10	2467	2.5	5.5	4.0	2.0	2506	chr3R	30480472	intron	PH4alphaEFB +	chr3R	30481725	intron	PH4alphaEFB +	chr3R	30482978	intron	PH4alphaEFB +	chr3R_10_30480001	chr3R_30480001	RAL-812
1535	chr3R	30679518	30679552	chr3R	30686986	30687021	blood	6	7468	2.5	6.0	4.2	1.2	7503	chr3R	30679518	intergenic	not near genes	chr3R	30683270	intergenic	not near genes	chr3R	30687021	intergenic	not near genes	chr3R_6_30680001	chr3R_30680001	RAL-812
1543	chr3R	31074233	31074260	chr3R	31081831	31081858	springer	7	7598	6.5	5.0	5.8	1.0	7625	chr3R	31074233	intron	Sox100B +	chr3R	31078046	intron	Sox100B +	chr3R	31081858	intron	Sox100B +	chr3R_7_31075001	chr3R_31075001	RAL-812
1546	chr3R	31279372	31279409	chr3R	31285562	31285563	diver	15	6183	4.0	2.5	3.2	3.6	6191	chr3R	31279372	intergenic	not near genes	chr3R	31282468	intergenic	not near genes	chr3R	31285563	intergenic	not near genes	chr3R_15_31280001	chr3R_31280001	RAL-812
1547	chr3R	31413087	31413116	chr3R	31418287	31418314	copia	11	5200	2.0	3.5	2.8	2.9	5227	chr3R	31413087	intron	Gprk2 +	chr3R	31415700	intron	Gprk2 +	chr3R	31418314	intron	Gprk2 +	chr3R_11_31415001	chr3R_31415001	RAL-812
1551	chr3R	31691535	31691560	chr3R	31696296	31696325	Doc	17	4764	5.5	6.0	5.8	2.5	4790	chr3R	31691535	intergenic	not near genes	chr3R	31693930	intergenic	not near genes	chr3R	31696325	intergenic	not near genes	chr3R_17_31690001	chr3R_31690001	RAL-812
1555	chr3R	31997994	31998022	chr3R	32005461	32005468	blood	11	7467	2.0	1.0	1.5	4.4	7474	chr3R	31997994	intron	heph -	chr3R	32001731	intron	heph -	chr3R	32005468	intron	heph -	chr3R_11_32000001	chr3R_32000001	RAL-812
1558	chr4	671607	671617	chr4	680190	680199	Tirant	6	8582	6.5	4.5	5.5	0.9	8592	chr4	671607	intron	CG11360 +	chr4	675903	intron	CG11360 +	chr4	680199	intron	CG11360 +	chr4_6_675001	chr4_675001	RAL-812
1560	chrX	428416	428450	chrX	434601	434635	3S18	6	6185	4.5	0.0	2.2	1.9	6219	chrX	428416	intron	CG32816 -	chrX	431526	intron	CG32816 -	chrX	434635	intron	CG32816 -	chrX_6_430001	chrX_430001	RAL-812
1565	chrX	551447	551453	chrX	558982	559014	412	4	7554	5.0	2.0	3.5	0.9	7567	chrX	551447	intron	Appl +	chrX	555230	intron	Appl +	chrX	559014	intron	Appl +	chrX_4_555001	chrX_555001	RAL-812
1573	chrX	827599	827634	chrX	835391	835403	roo	12	7790	4.0	3.0	3.5	2.7	7804	chrX	827599	intron	CG43867 -	chrX	831501	intron	CG43867 -	chrX	835403	intron	CG43867 -	chrX_12_830001	chrX_830001	RAL-812
1579	chrX	1518041	1518065	chrX	1523436	1523467	jockey	8	5400	5.5	3.0	4.2	1.5	5426	chrX	1518041	intergenic	inc +	chrX	1520754	intergenic	not near genes	chrX	1523467	intergenic	not near genes	chrX_8_1520001	chrX_1520001	RAL-812
1581	chrX	1627977	1628005	chrX	1635445	1635456	gtwin	10	7464	3.0	3.5	3.2	2.4	7479	chrX	1627977	intron,intron	Mur2B -,br +	chrX	1631716	intron,intron	Mur2B -,br +	chrX	1635456	intron,intron	Mur2B -,br +	chrX_10_1630001	chrX_1630001	RAL-812
1584	chrX	1954888	1954916	chrX	1962826	1962827	Stalker2	6	7929	2.5	0.5	1.5	2.4	7939	chrX	1954888	intron	Hr4 +	chrX	1958858	intron	Hr4 +	chrX	1962827	intron	Hr4 +	chrX_6_1955001	chrX_1955001	RAL-812
1589	chrX	2399836	2399865	chrX	2408188	2408199	roo	8	8349	3.5	4.0	3.8	1.7	8363	chrX	2399836	intergenic	not near genes	chrX	2404018	intergenic	not near genes	chrX	2408199	intergenic	not near genes	chrX_8_2400001	chrX_2400001	RAL-812
1593	chrX	2610384	2610397	chrX	2617501	2617514	HMS-Beagle	4	7117	4.0	1.0	2.5	1.1	7130	chrX	2610384	intergenic	CG8636 -	chrX	2613949	intergenic	not near genes	chrX	2617514	intergenic	Tsp3A -	chrX_4_2610001	chrX_2610001	RAL-812
1597	chrX	3058023	3058049	chrX	3058264	3058290	pogo	4	241	1.5	0.0	0.8	2.2	267	chrX	3058023	intron	kirre +	chrX	3058156	intron	kirre +	chrX	3058290	intron	kirre +	chrX_4_3055001	chrX_3055001	RAL-812
1600	chrX	3415019	3415047	chrX	3421204	3421231	3S18	8	6184	0.0	2.0	1.0	4.0	6212	chrX	3415019	intron,intron	CR44999 +,CG12535 -	chrX	3418125	intron,intron	CR44999 +,CG12535 -	chrX	3421231	intron,intron	CR44999 +,CG12535 -	chrX_8_3415001	chrX_3415001	RAL-812
1601	chrX	3493091	3493116	chrX	3502250	3502275	roo	8	9158	3.0	1.5	2.2	2.5	9184	chrX	3493091	intron,intron	CR44999 +,Gas8 -	chrX	3497683	intron,intron	CR44999 +,Gas8 -	chrX	3502275	intron,intron	CR44999 +,Gas8 -	chrX_8_3495001	chrX_3495001	RAL-812
1603	chrX	3597560	3597582	chrX	3619728	3619750	roo	9	22167	4.5	2.5	3.5	2.0	22190	chrX	3597560	intron	AstA-R1 +	chrX	3608655	intron	AstA-R1 +	chrX	3619750	intron	AstA-R1 +	chrX_9_3605001	chrX_3605001	RAL-812
1605	chrX	3726768	3726796	chrX	3730165	3730190	NOF	7	3393	2.5	0.0	1.2	3.2	3422	chrX	3726768	intron	tlk +	chrX	3728479	intron	tlk +	chrX	3730190	intron	tlk +	chrX_7_3725001	chrX_3725001	RAL-812
1608	chrX	3986868	3986896	chrX	3994501	3994528	412	10	7633	2.0	3.5	2.8	2.6	7660	chrX	3986868	intergenic	not near genes	chrX	3990698	intergenic	not near genes	chrX	3994528	intergenic	not near genes	chrX_10_3990001	chrX_3990001	RAL-812
1610	chrX	4157902	4157922	chrX	4164955	4164974	297	5	7052	2.0	1.0	1.5	2.0	7072	chrX	4157902	intron	Fas2 -	chrX	4161438	intron	Fas2 -	chrX	4164974	intron	Fas2 -	chrX_5_4160001	chrX_4160001	RAL-812
1617	chrX	4700392	4700427	chrX	4700733	4700769	jockey	5	342	2.0	0.0	1.0	2.5	377	chrX	4700392	3` UTR	ctp +	chrX	4700580	3` UTR	ctp +	chrX	4700769	3` UTR	ctp +	chrX_5_4700001	chrX_4700001	RAL-812
1618	chrX	4731811	4731831	chrX	4736904	4736924	jockey	8	5092	7.0	5.5	6.2	1.1	5113	chrX	4731811	intergenic	not near genes	chrX	4734368	intergenic	not near genes	chrX	4736924	intergenic	not near genes	chrX_8_4730001	chrX_4730001	RAL-812
1619	chrX	4763257	4763282	chrX	4763740	4763770	Stalker4	4	487	1.5	1.0	1.2	1.8	513	chrX	4763257	intergenic	not near genes	chrX	4763514	intergenic	not near genes	chrX	4763770	intergenic	not near genes	chrX_4_4760001	chrX_4760001	RAL-812
1621	chrX	4792383	4792407	chrX	4792816	4792840	jockey	4	432	2.5	5.0	3.8	0.8	457	chrX	4792383	intergenic	not near genes	chrX	4792612	intergenic	not near genes	chrX	4792840	intergenic	not near genes	chrX_4_4790001	chrX_4790001	RAL-812
1622	chrX	4827993	4828001	chrX	4835344	4835372	Stalker4	9	7365	4.5	1.5	3.0	2.2	7379	chrX	4827993	intergenic	not near genes	chrX	4831682	intergenic	not near genes	chrX	4835372	intergenic	not near genes	chrX_9_4830001	chrX_4830001	RAL-812
1624	chrX	4990046	4990075	chrX	4997260	4997289	roo	9	7214	2.5	2.5	2.5	2.6	7243	chrX	4990046	intron	CR44833 -	chrX	4993668	intron	CR44833 -	chrX	4997289	intron	CR44833 -	chrX_9_4990001	chrX_4990001	RAL-812
1625	chrX	5096280	5096303	chrX	5103845	5103867	springer	7	7563	3.5	2.5	3.0	1.8	7587	chrX	5096280	intron,intron	CG15465 +,rg +	chrX	5100074	intron,intron	CG15465 +,rg +	chrX	5103867	intron,intron	CG15465 +,rg +	chrX_7_5100001	chrX_5100001	RAL-812
1629	chrX	5884161	5884185	chrX	5884402	5884425	pogo	6	241	2.0	1.5	1.8	2.1	264	chrX	5884161	intron	CR45668 -	chrX	5884293	intron	CR45668 -	chrX	5884425	intron	CR45668 -	chrX_6_5880001	chrX_5880001	RAL-812
1631	chrX	6171584	6171617	chrX	6179017	6179050	Quasimodo	4	7430	1.0	1.0	1.0	2.0	7466	chrX	6171584	intron	Ca-alpha1T -	chrX	6175317	intron	Ca-alpha1T -	chrX	6179050	intron	Ca-alpha1T -	chrX_4_6175001	chrX_6175001	RAL-812
1632	chrX	6335211	6335244	chrX	6337719	6337754	Tirant	7	2510	0.0	4.0	2.0	2.3	2543	chrX	6335211	intergenic	not near genes	chrX	6336482	intergenic	not near genes	chrX	6337754	intergenic	CG3842 +	chrX_7_6335001	chrX_6335001	RAL-812
1633	chrX	6392883	6392901	chrX	6397644	6397666	Doc	9	4764	1.0	5.0	3.0	2.2	4783	chrX	6392883	intergenic	not near genes	chrX	6395274	intergenic	not near genes	chrX	6397666	intergenic	not near genes	chrX_9_6395001	chrX_6395001	RAL-812
1635	chrX	6562819	6562851	chrX	6571300	6571330	Tirant	15	8480	1.5	2.0	1.8	5.4	8511	chrX	6562819	intron	CG34417 +	chrX	6567074	intron	CG34417 +	chrX	6571330	intron	CG34417 +	chrX_15_6565001	chrX_6565001	RAL-812
1636	chrX	6605491	6605497	chrX	6608513	6608519	Burdock	4	3022	1.5	4.5	3.0	1.0	3028	chrX	6605491	intron	pigs +	chrX	6607005	intron	pigs +	chrX	6608519	intron	pigs +	chrX_4_6605001	chrX_6605001	RAL-812
1639	chrX	7023599	7023633	chrX	7030989	7031023	Tabor	8	7387	4.0	2.0	3.0	2.0	7424	chrX	7023599	intron	CG12541 -	chrX	7027311	intron	CG12541 -	chrX	7031023	intron	CG12541 -	chrX_8_7025001	chrX_7025001	RAL-812
1640	chrX	7125246	7125279	chrX	7134405	7134438	roo	9	9159	2.5	4.0	3.2	2.1	9192	chrX	7125246	intergenic	not near genes	chrX	7129842	intergenic	not near genes	chrX	7134438	intergenic	not near genes	chrX_9_7125001	chrX_7125001	RAL-812
1645	chrX	7702904	7702931	chrX	7703343	7703370	jockey	12	439	4.0	2.5	3.2	2.9	466	chrX	7702904	intron	CHES-1-like -	chrX	7703137	intron	CHES-1-like -	chrX	7703370	intron	CHES-1-like -	chrX_12_7700001	chrX_7700001	RAL-812
1647	chrX	7784236	7784244	chrX	7784535	7784541	jockey	4	300	7.5	3.5	5.5	0.6	305	chrX	7784236	intergenic	not near genes	chrX	7784388	intergenic	not near genes	chrX	7784541	intergenic	not near genes	chrX_4_7780001	chrX_7780001	RAL-812
1650	chrX	8031428	8031457	chrX	8035737	8035766	Juan	6	4309	3.0	0.0	1.5	2.4	4338	chrX	8031428	intergenic	not near genes	chrX	8033597	intergenic	not near genes	chrX	8035766	3` UTR	CG2233 -	chrX_6_8030001	chrX_8030001	RAL-812
1654	chrX	8364852	8364875	chrX	8365249	8365271	BS	4	397	0.5	3.0	1.8	1.4	419	chrX	8364852	intron	nAChRalpha3 -	chrX	8365062	intron	nAChRalpha3 -	chrX	8365271	intron	nAChRalpha3 -	chrX_4_8365001	chrX_8365001	RAL-812
1658	chrX	8922339	8922361	chrX	8922760	8922793	jockey	6	424	2.5	4.5	3.5	1.3	454	chrX	8922339	intron	rdgA +	chrX	8922566	intron	rdgA +	chrX	8922793	intron	rdgA +	chrX_6_8920001	chrX_8920001	RAL-812
1659	chrX	8948760	8948781	chrX	8956270	8956291	roo	5	7510	0.0	0.0	0.0	5.0	7531	chrX	8948760	intron	rdgA +	chrX	8952526	intron	rdgA +	chrX	8956291	intron	rdgA +	chrX_5_8950001	chrX_8950001	RAL-812
1667	chrX	9508157	9508166	chrX	9509675	9509684	jockey	4	1516	2.0	4.5	3.2	1.0	1527	chrX	9508157	intron	CG32700 -	chrX	9508920	intron	CG32700 -	chrX	9509684	intron	CG32700 -	chrX_4_9505001	chrX_9505001	RAL-812
1669	chrX	9575800	9575822	chrX	9576114	9576146	mdg3	11	321	2.5	4.0	3.2	2.6	346	chrX	9575800	intron,exon	CG32699 -,CG42395 -	chrX	9575973	intron,intron	CG32699 -,CG42395 -	chrX	9576146	intron,5` UTR	CG32699 -,CG42395 -	chrX_11_9575001	chrX_9575001	RAL-812
1674	chrX	10550850	10550889	chrX	10552317	10552355	hobo	12	1466	3.5	2.0	2.8	3.2	1505	chrX	10550850	intron	spri -	chrX	10551602	intron	spri -	chrX	10552355	intron	spri -	chrX_12_10550001	chrX_10550001	RAL-812
1676	chrX	10686052	10686080	chrX	10691189	10691216	roo	10	5137	1.5	4.5	3.0	2.5	5164	chrX	10686052	intron	X11Lbeta +	chrX	10688634	intron	X11Lbeta +	chrX	10691216	intron	X11Lbeta +	chrX_10_10685001	chrX_10685001	RAL-812
1685	chrX	11312064	11312081	chrX	11319413	11319422	Stalker2	5	7348	4.0	1.5	2.8	1.3	7358	chrX	11312064	intergenic	not near genes	chrX	11315743	intergenic	not near genes	chrX	11319422	intergenic	not near genes	chrX_5_11315001	chrX_11315001	RAL-812
1687	chrX	11633418	11633434	chrX	11640471	11640488	297	7	7054	3.5	2.0	2.8	1.8	7070	chrX	11633418	intron	Ptp10D +	chrX	11636953	intron	Ptp10D +	chrX	11640488	intron	Ptp10D +	chrX_7_11635001	chrX_11635001	RAL-812
1692	chrX	12301955	12301986	chrX	12303261	12303290	X-element	8	1303	3.5	3.0	3.2	1.9	1335	chrX	12301955	intron	Ten-a +	chrX	12302622	intron	Ten-a +	chrX	12303290	intron	Ten-a +	chrX_8_12300001	chrX_12300001	RAL-812
1704	chrX	13429472	13429494	chrX	13430621	13430643	jockey	5	1149	0.0	2.0	1.0	2.5	1171	chrX	13429472	intergenic	not near genes	chrX	13430058	intergenic	not near genes	chrX	13430643	intergenic	not near genes	chrX_5_13430001	chrX_13430001	RAL-812
1705	chrX	13463652	13463676	chrX	13469229	13469253	mdg3	4	5577	0.5	0.5	0.5	2.7	5601	chrX	13463652	intron	Neto +	chrX	13466452	intron	Neto +	chrX	13469253	intron	Neto +	chrX_4_13465001	chrX_13465001	RAL-812
1709	chrX	14105027	14105051	chrX	14114175	14114201	roo	6	9146	3.0	7.0	5.0	1.0	9174	chrX	14105027	intergenic	not near genes	chrX	14109614	intergenic	not near genes	chrX	14114201	5` UTR	CR44657 +	chrX_6_14105001	chrX_14105001	RAL-812
1711	chrX	14157596	14157616	chrX	14163253	14163273	297	4	5657	2.0	1.0	1.5	1.6	5677	chrX	14157596	intergenic	not near genes	chrX	14160434	intergenic	not near genes	chrX	14163273	intergenic	not near genes	chrX_4_14160001	chrX_14160001	RAL-812
1719	chrX	14589685	14589708	chrX	14589926	14589949	pogo	4	240	2.5	0.0	1.2	1.8	264	chrX	14589685	intron	CG9413 -	chrX	14589817	intron	CG9413 -	chrX	14589949	intron	CG9413 -	chrX_4_14585001	chrX_14585001	RAL-812
1720	chrX	14636465	14636493	chrX	14641906	14641934	I-element	6	5441	2.5	3.5	3.0	1.5	5469	chrX	14636465	intron	NetA -	chrX	14639200	intron	NetA -	chrX	14641934	intron	NetA -	chrX_6_14635001	chrX_14635001	RAL-812
1724	chrX	15273703	15273737	chrX	15274868	15274904	1360	9	1157	6.0	3.5	4.8	1.6	1201	chrX	15273703	intergenic	not near genes	chrX	15274304	intergenic	not near genes	chrX	15274904	intergenic	not near genes	chrX_9_15270001	chrX_15270001	RAL-812
1727	chrX	15413057	15413083	chrX	15417357	15417366	Juan	5	4297	3.0	4.5	3.8	1.0	4309	chrX	15413057	intron	Cngl -	chrX	15415212	intron	Cngl -	chrX	15417366	intron	Cngl -	chrX_5_15415001	chrX_15415001	RAL-812
1746	chrX	18194064	18194097	chrX	18194599	18194631	BS	7	535	1.0	1.0	1.0	3.5	567	chrX	18194064	intron	Frq2 +	chrX	18194348	intron	Frq2 +	chrX	18194631	intron	Frq2 +	chrX_7_18190001	chrX_18190001	RAL-812
1752	chrX	19060410	19060432	chrX	19065194	19065216	Doc	4	4784	3.5	3.0	3.2	1.0	4806	chrX	19060410	intron	CG14190 +	chrX	19062813	intron	CG14190 +	chrX	19065216	intron	CG14190 +	chrX_4_19060001	chrX_19060001	RAL-812
1755	chrX	19380167	19380188	chrX	19380408	19380429	pogo	7	241	2.5	1.0	1.8	2.5	262	chrX	19380167	intron	kek5 +	chrX	19380298	intron	kek5 +	chrX	19380429	intron	kek5 +	chrX_7_19380001	chrX_19380001	RAL-812
1757	chrX	19472127	19472145	chrX	19472697	19472711	jockey	8	569	4.0	2.5	3.2	1.9	584	chrX	19472127	intergenic	kek5 +	chrX	19472419	intergenic	not near genes	chrX	19472711	intergenic	not near genes	chrX_8_19470001	chrX_19470001	RAL-812
1759	chrX	19710078	19710103	chrX	19711864	19711889	S-element	6	1786	3.5	6.0	4.8	1.0	1811	chrX	19710078	intron	meso18E -	chrX	19710984	intron	meso18E -	chrX	19711889	intron	meso18E -	chrX_6_19710001	chrX_19710001	RAL-812
1766	chrX	20377325	20377349	chrX	20378791	20378816	hobo	7	1466	3.5	4.5	4.0	1.4	1491	chrX	20377325	intergenic	not near genes	chrX	20378070	intergenic	not near genes	chrX	20378816	intergenic	not near genes	chrX_7_20375001	chrX_20375001	RAL-812
1770	chrX	20836731	20836757	chrX	20844333	20844359	roo	8	7602	1.5	0.5	1.0	4.0	7628	chrX	20836731	intron	shakB -	chrX	20840545	intron	shakB -	chrX	20844359	intron	shakB -	chrX_8_20840001	chrX_20840001	RAL-812
1771	chrX	20940721	20940744	chrX	20942190	20942213	hobo	9	1468	7.5	4.5	6.0	1.3	1492	chrX	20940721	intergenic	not near genes	chrX	20941467	intergenic	not near genes	chrX	20942213	intergenic	not near genes	chrX_9_20940001	chrX_20940001	RAL-812
1778	chrX	21458699	21458730	chrX	21464135	21464166	Ivk	4	5436	0.5	3.5	2.0	1.3	5467	chrX	21458699	intergenic	not near genes	chrX	21461432	intergenic	not near genes	chrX	21464166	intergenic	not near genes	chrX_4_21460001	chrX_21460001	RAL-812
1784	chrX	22522626	22522646	chrX	22525446	22525466	NOF	4	2820	1.5	1.0	1.2	1.8	2840	chrX	22522626	intron	CG17600 +	chrX	22524046	intron	CG17600 +	chrX	22525466	intron	CG17600 +	chrX_4_22520001	chrX_22520001	RAL-812
1788	chrX	22697509	22697520	chrX	22701806	22701817	Juan	5	4297	4.0	2.0	3.0	1.2	4308	chrX	22697509	intron	CR44997 +	chrX	22699663	intron	CR44997 +	chrX	22701817	intron	CR44997 +	chrX_5_22695001	chrX_22695001	RAL-812