SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	171910	171982	FB	1	3	15	72	'7-8	68.85	5.8	2.2	intron	spen +	chr2L_15_170001	chr2L_170001	0.47	RAL-810
2	chr2L	769980	770054	roo	409	7	19	74	'11-8	64.68	2.9	4.9	intergenic	not near genes	chr2L_19_765001	chr2L_765001	0.58	RAL-810
3	chr2L	902770	902847	roo	403	8662	19	77	'7-12	65.66	4.0	3.8	intergenic	not near genes	chr2L_19_900001	chr2L_900001	0.37	RAL-810
4	chr2L	984519	984548	roo	8696	3	13	29	'6-7	68.54	1.7	4.8	intergenic	not near genes	chr2L_13_980001	chr2L_980001	0.46	RAL-810
5	chr2L	1526249	1526279	Doc	2	30	6	30	'3-3	63.93	4.0	1.2	intergenic	not near genes	chr2L_6_1525001	chr2L_1525001	0.50	RAL-810
6	chr2L	1743111	1743135	Doc	34	10	11	24	'3-8	53.40	1.9	3.8	intron	CG17646 +	chr2L_11_1740001	chr2L_1740001	0.27	RAL-810
7	chr2L	2420495	2420561	3S18	16	342	11	66	'4-7	64.82	1.3	4.8	intergenic	CG9886 +,CG34447 -	chr2L_11_2420001	chr2L_2420001	0.36	RAL-810
8	chr2L	2441104	2441185	Tirant	8106	8503	20	81	'7-13	64.69	2.5	5.7	intron	dpp +	chr2L_20_2440001	chr2L_2440001	0.35	RAL-810
9	chr2L	2621554	2621578	BS	5066	5042	18	24	'11-7	59.09	1.9	6.2	intergenic	not near genes	chr2L_18_2620001	chr2L_2620001	0.61	RAL-810
10	chr2L	2635637	2635717	17.6	492	2	12	80	'7-5	69.33	3.9	2.4	intergenic	not near genes	chr2L_12_2635001	chr2L_2635001	0.58	RAL-810
11	chr2L	3949611	3949668	hobo	2923	5	11	57	'4-7	63.03	3.0	2.8	intron	fred -	chr2L_11_3945001	chr2L_3945001	0.36	RAL-810
12	chr2L	3952427	3952502	copia	252	4871	11	75	'3-8	64.77	3.1	2.7	intron	fred -	chr2L_11_3950001	chr2L_3950001	0.27	RAL-810
13	chr2L	4197112	4197164	jockey	4975	4770	12	52	'7-5	61.38	1.6	4.6	intron	CG3714 -	chr2L_12_4195001	chr2L_4195001	0.58	RAL-810
14	chr2L	4635511	4635571	pogo	8	2085	13	60	'8-5	65.35	1.6	5.0	intergenic	not near genes	chr2L_13_4635001	chr2L_4635001	0.62	RAL-810
15	chr2L	4719005	4719086	297	6973	6580	11	81	'6-5	66.55	2.7	3.0	intron	CG34351 +	chr2L_11_4715001	chr2L_4715001	0.55	RAL-810
16	chr2L	4767262	4767333	roo	5	404	11	71	'6-5	67.85	4.3	2.1	intron	CG15630 -	chr2L_11_4765001	chr2L_4765001	0.55	RAL-810
17	chr2L	5636188	5636262	pogo	1	2092	18	74	'10-8	68.67	1.7	6.7	intron	CG31646 -	chr2L_18_5635001	chr2L_5635001	0.56	RAL-810
18	chr2L	5790865	5790938	FB	2	2	18	73	'11-7	61.31	4.7	3.2	intron	CG9171 -	chr2L_18_5790001	chr2L_5790001	0.61	RAL-810
19	chr2L	5848318	5848380	roo	8684	410	10	62	'4-6	66.84	2.6	2.8	intron	TrissinR +	chr2L_10_5845001	chr2L_5845001	0.40	RAL-810
20	chr2L	6145267	6145341	Max-element	3	8532	7	74	'3-4	62.26	4.5	1.3	intergenic	CG13991 +	chr2L_7_6145001	chr2L_6145001	0.43	RAL-810
21	chr2L	6296708	6296775	TART-A	13150	13112	4	67	'1-3	52.66	4.0	0.8	exon	Ddr +	chr2L_4_6295001	chr2L_6295001	0.25	RAL-810
22	chr2L	7574164	7574245	Transpac	4918	5227	16	81	'12-4	64.93	4.6	2.9	intron	RapGAP1 -	chr2L_16_7570001	chr2L_7570001	0.75	RAL-810
23	chr2L	7576603	7576637	P-element	17	2862	7	34	'4-3	38.90	3.7	1.5	intron	RapGAP1 -	chr2L_7_7575001	chr2L_7575001	0.57	RAL-810
24	chr2L	7862496	7862576	roo	409	8664	13	80	'7-6	69.14	4.2	2.5	intergenic	not near genes	chr2L_13_7860001	chr2L_7860001	0.54	RAL-810
25	chr2L	8257260	8257345	mdg1	37	7079	7	85	'3-4	70.60	3.2	1.7	5` UTR	CG8086 -	chr2L_7_8255001	chr2L_8255001	0.43	RAL-810
26	chr2L	8445729	8445782	Max-element	313	8240	8	53	'2-6	56.71	4.5	1.5	3` UTR	CG31897 +	chr2L_8_8445001	chr2L_8445001	0.25	RAL-810
27	chr2L	8744116	8744200	opus	110	497	14	84	'4-10	67.45	5.0	2.3	intergenic	not near genes	chr2L_14_8740001	chr2L_8740001	0.29	RAL-810
28	chr2L	8808112	8808136	jockey	4737	4713	5	24	'3-2	62.80	4.5	0.9	intergenic	not near genes	chr2L_5_8805001	chr2L_8805001	0.60	RAL-810
29	chr2L	8902393	8902478	roo	8662	411	17	85	'6-11	69.73	2.6	4.7	intron	CG34398 +	chr2L_17_8900001	chr2L_8900001	0.35	RAL-810
30	chr2L	8959953	8959982	Ivk	5344	5373	11	29	'4-7	64.99	0.6	6.9	3` UTR	CG9525 -	chr2L_11_8955001	chr2L_8955001	0.36	RAL-810
31	chr2L	9010433	9010507	1360	2	3386	21	74	'9-12	64.83	3.7	4.5	intergenic	CG9568 +	chr2L_21_9010001	chr2L_9010001	0.43	RAL-810
32	chr2L	9077644	9077703	jockey	4761	4983	11	59	'5-6	65.20	4.2	2.1	exon	CG12439 +	chr2L_11_9075001	chr2L_9075001	0.45	RAL-810
33	chr2L	9128744	9128825	blood	7012	378	14	81	'6-8	66.06	5.6	2.1	intron	CG32982 +	chr2L_14_9125001	chr2L_9125001	0.43	RAL-810
34	chr2L	9176199	9176255	P-element	2886	1	4	56	'2-2	56.86	3.0	1.0	intron	tai +	chr2L_4_9175001	chr2L_9175001	0.50	RAL-810
35	chr2L	9179830	9179856	F-element	33	7	7	26	'5-2	60.00	4.3	1.3	intron	tai +	chr2L_7_9175001	chr2L_9175001	0.71	RAL-810
36	chr2L	9281677	9281705	Doc	7	35	9	28	'5-4	58.77	1.2	4.1	intron	Ggamma30A +	chr2L_9_9280001	chr2L_9280001	0.56	RAL-810
37	chr2L	9361909	9361925	roo	390	407	6	16	'3-3	60.95	7.3	0.7	intergenic	not near genes	chr2L_6_9360001	chr2L_9360001	0.50	RAL-810
38	chr2L	9705125	9705201	roo	8664	410	20	76	'12-8	65.08	5.6	3.0	intron,intron	pelo +,CG31710 -	chr2L_20_9705001	chr2L_9705001	0.60	RAL-810
39	chr2L	9749707	9749777	mdg3	237	5252	15	70	'8-7	65.29	4.0	3.0	intron	Cyp4e3 -	chr2L_15_9745001	chr2L_9745001	0.53	RAL-810
40	chr2L	9873351	9873428	hobo	6	2706	12	77	'7-5	64.12	1.6	4.6	intron	nAChRalpha6 -	chr2L_12_9870001	chr2L_9870001	0.58	RAL-810
41	chr2L	9884316	9884342	hobo	26	3	10	26	'5-5	68.63	2.1	3.2	intron	nAChRalpha6 -	chr2L_10_9880001	chr2L_9880001	0.50	RAL-810
42	chr2L	11045565	11045620	Burdock	6363	6135	9	55	'5-4	71.56	2.7	2.4	intron	Samuel -	chr2L_9_11045001	chr2L_11045001	0.56	RAL-810
43	chr2L	11047979	11047995	Juan	4206	4192	5	16	'3-2	59.29	2.3	1.5	intron	Samuel -	chr2L_5_11045001	chr2L_11045001	0.60	RAL-810
44	chr2L	11250302	11250329	HMS-Beagle	242	7011	5	27	'2-3	70.06	5.4	0.8	intron	ab +	chr2L_5_11250001	chr2L_11250001	0.40	RAL-810
45	chr2L	11303268	11303286	I-element	5347	5328	4	18	'1-3	70.57	0.0	4.0	intergenic	not near genes	chr2L_4_11300001	chr2L_11300001	0.25	RAL-810
46	chr2L	11327423	11327499	diver	6	226	15	76	'8-7	64.89	3.2	3.6	intergenic	not near genes	chr2L_15_11325001	chr2L_11325001	0.53	RAL-810
47	chr2L	11528347	11528368	pogo	7	28	6	21	'2-4	67.39	7.2	0.7	intergenic	CG31705 -	chr2L_6_11525001	chr2L_11525001	0.33	RAL-810
48	chr2L	11778180	11778250	Max-element	3	293	11	70	'5-6	61.90	3.4	2.5	intergenic	not near genes	chr2L_11_11775001	chr2L_11775001	0.45	RAL-810
49	chr2L	11931646	11931703	mdg1	23	420	14	57	'3-11	64.76	1.3	6.1	intergenic	not near genes	chr2L_14_11930001	chr2L_11930001	0.21	RAL-810
50	chr2L	12195978	12196048	mdg1	412	7039	13	70	'5-8	60.71	4.7	2.3	intron	aret +	chr2L_13_12195001	chr2L_12195001	0.38	RAL-810
51	chr2L	12228300	12228316	jockey	4970	4986	5	16	'3-2	57.74	3.1	1.2	intron	aret +	chr2L_5_12225001	chr2L_12225001	0.60	RAL-810
52	chr2L	12338249	12338300	412	7539	16	7	51	'3-4	62.64	4.1	1.4	intergenic	not near genes	chr2L_7_12335001	chr2L_12335001	0.43	RAL-810
53	chr2L	12773610	12773663	BS	7	5085	9	53	'1-8	61.17	5.1	1.5	intergenic	not near genes	chr2L_9_12770001	chr2L_12770001	0.11	RAL-810
54	chr2L	12815633	12815701	hopper	6	1408	7	68	'1-6	70.15	4.1	1.4	intergenic	not near genes	chr2L_7_12815001	chr2L_12815001	0.14	RAL-810
55	chr2L	12834767	12834824	hobo	2708	24	6	57	'3-3	65.45	3.6	1.3	intergenic	not near genes	chr2L_6_12830001	chr2L_12830001	0.50	RAL-810
56	chr2L	13557283	13557503	roo	409	8708	18	220	'17-1	68.35	3.5	4.0	intron	kuz +	chr2L_18_13555001	chr2L_13555001	0.94	RAL-810
57	chr2L	13763487	13763565	Bari1	1701	1	31	78	'12-19	62.62	3.6	6.7	intron	TM9SF4 +	chr2L_31_13760001	chr2L_13760001	0.39	RAL-810
58	chr2L	14020750	14020821	P-element	2884	2883	8	71	'3-5	55.64	5.6	1.2	intergenic	CR44849 +	chr2L_8_14020001	chr2L_14020001	0.38	RAL-810
59	chr2L	14054302	14054347	hobo	2928	12	6	45	'2-4	60.20	2.0	2.0	intron	nAChRalpha5 +	chr2L_6_14050001	chr2L_14050001	0.33	RAL-810
60	chr2L	14224581	14224647	FB	4	7	14	66	'9-5	64.16	4.7	2.5	intron	Dyrk2 -	chr2L_14_14220001	chr2L_14220001	0.64	RAL-810
61	chr2L	14963471	14963539	17.6	6	484	4	68	'1-3	63.21	3.1	1.0	intron	CG42313 -	chr2L_4_14960001	chr2L_14960001	0.25	RAL-810
62	chr2L	15142255	15142312	BS	4705	5085	15	57	'7-8	67.08	4.7	2.6	intergenic	not near genes	chr2L_15_15140001	chr2L_15140001	0.47	RAL-810
63	chr2L	15332785	15332859	P-element	2	2	8	74	'4-4	55.95	5.1	1.3	intergenic	not near genes	chr2L_8_15330001	chr2L_15330001	0.50	RAL-810
64	chr2L	15333600	15333671	P-element	1	2881	10	71	'7-3	47.71	4.9	1.7	intergenic	esg +	chr2L_10_15330001	chr2L_15330001	0.70	RAL-810
65	chr2L	15803536	15803556	hobo	21	1	7	20	'2-5	61.11	5.6	1.1	intergenic	not near genes	chr2L_7_15800001	chr2L_15800001	0.29	RAL-810
66	chr2L	15864270	15864299	hobo	1	30	9	29	'3-6	64.83	3.5	2.0	intergenic	not near genes	chr2L_9_15860001	chr2L_15860001	0.33	RAL-810
67	chr2L	15876032	15876083	Juan	3	4199	11	51	'6-5	63.45	4.1	2.2	intergenic	not near genes	chr2L_11_15875001	chr2L_15875001	0.55	RAL-810
68	chr2L	15882445	15882508	Quasimodo	8	7358	6	63	'4-2	70.02	3.5	1.3	intergenic	CG44475 -	chr2L_6_15880001	chr2L_15880001	0.67	RAL-810
69	chr2L	16197277	16197358	Burdock	1	255	18	81	'5-13	65.18	3.0	4.5	intergenic	not near genes	chr2L_18_16195001	chr2L_16195001	0.28	RAL-810
70	chr2L	16293718	16293795	Burdock	6384	6134	16	77	'6-10	63.41	2.9	4.1	3` UTR	CR44899 -	chr2L_16_16290001	chr2L_16290001	0.38	RAL-810
71	chr2L	16536524	16536602	pogo	4	2099	6	78	'4-2	62.89	2.8	1.6	intergenic	not near genes	chr2L_6_16535001	chr2L_16535001	0.67	RAL-810
72	chr2L	16858585	16858641	P-element	2866	2886	10	56	'4-6	42.54	1.5	4.0	5` UTR	CG31809 -	chr2L_10_16855001	chr2L_16855001	0.40	RAL-810
73	chr2L	17156623	17156704	mdg3	248	5254	13	81	'8-5	60.57	2.7	3.5	intron,intron	CG34106 +,beat-IIIa +	chr2L_13_17155001	chr2L_17155001	0.62	RAL-810
74	chr2L	17288651	17288734	Transpac	4918	311	9	83	'6-3	69.30	4.4	1.7	intergenic	not near genes	chr2L_9_17285001	chr2L_17285001	0.67	RAL-810
75	chr2L	17549110	17549158	pogo	7	2072	6	48	'3-3	70.24	4.0	1.2	intergenic	not near genes	chr2L_6_17545001	chr2L_17545001	0.50	RAL-810
76	chr2L	17574370	17574437	hopper	1411	1404	8	67	'4-4	62.84	2.8	2.1	intergenic	mir-287 +	chr2L_8_17570001	chr2L_17570001	0.50	RAL-810
77	chr2L	17746437	17746509	copia	246	4868	15	72	'8-7	66.84	2.7	4.1	intron	CadN -	chr2L_15_17745001	chr2L_17745001	0.53	RAL-810
78	chr2L	18509432	18509464	Idefix	19	7363	4	32	'3-1	70.88	3.5	0.9	intergenic	CG10178 +	chr2L_4_18505001	chr2L_18505001	0.75	RAL-810
79	chr2L	18629430	18629505	pogo	6	2099	11	75	'6-5	68.54	2.4	3.2	intron	MESR3 +	chr2L_11_18625001	chr2L_18625001	0.55	RAL-810
80	chr2L	18640165	18640240	roo	8665	404	12	75	'6-6	66.40	4.0	2.4	intron	MESR3 +	chr2L_12_18640001	chr2L_18640001	0.50	RAL-810
81	chr2L	18674035	18674109	roo	2	405	17	74	'8-9	64.69	4.0	3.4	exon	Mst36Fb -	chr2L_17_18670001	chr2L_18670001	0.47	RAL-810
82	chr2L	19216957	19217023	mdg1	7446	2	17	66	'8-9	64.41	3.9	3.5	intergenic	CR44189 +	chr2L_17_19215001	chr2L_19215001	0.47	RAL-810
83	chr2L	19420143	19420185	P-element	2885	31	8	42	'5-3	47.67	3.5	1.8	intron	Pax -	chr2L_8_19420001	chr2L_19420001	0.62	RAL-810
84	chr2L	19681427	19681487	hopper	1398	1411	16	60	'2-14	63.17	6.5	2.1	intron	Lar +	chr2L_16_19680001	chr2L_19680001	0.12	RAL-810
85	chr2L	20243716	20243731	hobo	1	16	5	15	'2-3	60.68	5.9	0.7	intergenic	not near genes	chr2L_5_20240001	chr2L_20240001	0.40	RAL-810
86	chr2L	20361475	20361555	roo	408	8664	18	80	'7-11	65.84	3.3	4.2	intron	RtGEF +	chr2L_18_20360001	chr2L_20360001	0.39	RAL-810
87	chr2L	20798885	20798932	opus	7496	110	10	47	'6-4	47.06	2.1	3.2	intron	CG9328 +	chr2L_10_20795001	chr2L_20795001	0.60	RAL-810
88	chr2L	21073653	21073736	roo	8663	410	20	83	'13-7	63.30	5.5	3.1	intergenic	not near genes	chr2L_20_21070001	chr2L_21070001	0.65	RAL-810
89	chr2L	21400105	21400179	pogo	2095	3	13	74	'7-6	66.97	4.3	2.5	intergenic	not near genes	chr2L_13_21400001	chr2L_21400001	0.54	RAL-810
90	chr2L	21400735	21400761	Doc3-element	32	4692	4	26	'3-1	66.23	10.4	0.4	intergenic	not near genes	chr2L_4_21400001	chr2L_21400001	0.75	RAL-810
91	chr2L	21570229	21570255	Dm88	4387	4361	7	26	'3-4	68.33	3.1	1.7	intergenic	not near genes	chr2L_7_21570001	chr2L_21570001	0.43	RAL-810
92	chr2L	21689849	21689876	INE-1	535	553	5	27	'2-3	55.11	1.8	1.8	intron	CG31619 +	chr2L_5_21685001	chr2L_21685001	0.40	RAL-810
93	chr2L	22041857	22041936	Tabor	487	4	20	79	'8-12	64.08	3.1	4.9	intron	CG31601 -	chr2L_20_22040001	chr2L_22040001	0.40	RAL-810
94	chr2L	22112994	22113023	pogo	20	2069	4	29	'3-1	75.66	6.9	0.5	intergenic	not near genes	chr2L_4_22110001	chr2L_22110001	0.75	RAL-810
95	chr2L	22157566	22157632	S-element	1706	7	10	66	'4-6	63.79	3.5	2.2	intron	CG42748 +	chr2L_10_22155001	chr2L_22155001	0.40	RAL-810
96	chr2L	22243117	22243191	diver	221	2	17	74	'7-10	61.35	4.5	3.1	3` UTR	CG3262 +	chr2L_17_22240001	chr2L_22240001	0.41	RAL-810
97	chr2L	22357752	22357772	Cr1a	4200	4180	4	20	'3-1	63.67	4.5	0.7	intron	CG17018 +	chr2L_4_22355001	chr2L_22355001	0.75	RAL-810
98	chr2L	22497726	22497775	Tabor	6872	486	6	49	'5-1	70.67	0.0	6.0	intergenic	not near genes	chr2L_6_22495001	chr2L_22495001	0.83	RAL-810
99	chr2L	23068857	23068928	1360	3384	2	21	71	'6-15	64.87	6.2	2.9	intergenic	CR43242 +,Spf45 -	chr2L_21_23065001	chr2L_23065001	0.29	RAL-810
100	chr2L	23295817	23295863	micropia	5411	5	8	46	'2-6	64.00	3.0	2.0	intergenic	not near genes	chr2L_8_23295001	chr2L_23295001	0.25	RAL-810
101	chr2L	23299982	23300001	invader4	321	3080	5	19	'4-1	54.39	5.7	0.7	intergenic	not near genes	chr2L_5_23295001	chr2L_23295001	0.80	RAL-810
102	chr2R	403845	403903	flea	15	249	5	58	'4-1	65.96	2.8	1.3	intergenic	not near genes	chr2R_5_400001	chr2R_400001	0.80	RAL-810
103	chr2R	1081308	1081331	HMS-Beagle2	7199	7177	5	23	'3-2	67.90	6.8	0.6	intron	rl +	chr2R_5_1080001	chr2R_1080001	0.60	RAL-810
104	chr2R	1320688	1320709	diver2	366	4878	4	21	'2-2	54.20	11.2	0.3	intergenic	not near genes	chr2R_4_1320001	chr2R_1320001	0.50	RAL-810
105	chr2R	1521555	1521575	297	6974	6955	9	20	'4-5	64.64	30.7	0.3	5` UTR	Maf1 -	chr2R_9_1520001	chr2R_1520001	0.44	RAL-810
106	chr2R	2009404	2009421	I-element	6	21	7	17	'3-4	75.47	0.4	5.0	intron	CG17684 -	chr2R_7_2005001	chr2R_2005001	0.43	RAL-810
107	chr2R	2457359	2457430	17.6	7414	6	14	71	'8-6	65.26	0.0	14.0	intergenic	not near genes	chr2R_14_2455001	chr2R_2455001	0.57	RAL-810
108	chr2R	2846979	2846997	Tc1-2	1509	1491	8	18	'5-3	63.11	20.9	0.4	intergenic	CG41378 -	chr2R_8_2845001	chr2R_2845001	0.62	RAL-810
109	chr2R	4122516	4122589	opus	110	486	5	73	'1-4	67.11	4.4	0.9	intergenic	not near genes	chr2R_5_4120001	chr2R_4120001	0.20	RAL-810
110	chr2R	4181374	4181421	roo	8670	394	9	47	'7-2	62.70	7.3	1.1	intergenic	not near genes	chr2R_9_4180001	chr2R_4180001	0.78	RAL-810
111	chr2R	4551434	4551450	roo	8866	186	10	16	'5-5	63.23	2.7	2.7	intron	Stlk +	chr2R_10_4550001	chr2R_4550001	0.50	RAL-810
112	chr2R	4564589	4564654	flea	237	4755	12	65	'9-3	66.90	4.3	2.3	3` UTR	Stlk +	chr2R_12_4560001	chr2R_4560001	0.75	RAL-810
113	chr2R	4695793	4695827	1360	131	166	4	34	'2-2	68.23	5.0	0.7	intron	Nipped-B -	chr2R_4_4695001	chr2R_4695001	0.50	RAL-810
114	chr2R	4802881	4802897	mariner2	478	18	8	16	'5-3	55.93	11.9	0.6	intergenic	not near genes	chr2R_8_4800001	chr2R_4800001	0.62	RAL-810
115	chr2R	5259515	5259597	S-element	1	1	4	82	'1-3	65.34	3.0	1.0	intron	d4 +	chr2R_4_5255001	chr2R_5255001	0.25	RAL-810
116	chr2R	5485062	5485136	1360	1	4	18	74	'12-6	66.95	4.3	3.4	intron	CG30440 -	chr2R_18_5485001	chr2R_5485001	0.67	RAL-810
117	chr2R	5532313	5532337	G4	3762	3726	5	24	'2-3	57.87	8.3	0.5	intron	CG30438 +	chr2R_5_5530001	chr2R_5530001	0.40	RAL-810
118	chr2R	5796253	5796306	roo	8666	9046	15	53	'7-8	71.94	4.3	2.8	3` UTR	Tsp42A +	chr2R_15_5795001	chr2R_5795001	0.47	RAL-810
119	chr2R	5845340	5845369	roo	3	31	12	29	'7-5	66.22	3.5	2.7	intron	dpr12 +	chr2R_12_5845001	chr2R_5845001	0.58	RAL-810
120	chr2R	5957038	5957147	Burdock	252	6135	5	109	'2-3	60.80	2.6	1.4	intergenic	not near genes	chr2R_5_5955001	chr2R_5955001	0.40	RAL-810
121	chr2R	6023332	6023404	1360	1	3383	17	72	'5-12	71.85	3.3	4.0	intergenic	dream -	chr2R_17_6020001	chr2R_6020001	0.29	RAL-810
122	chr2R	6234325	6234425	INE-1	82	86	4	100	'1-3	64.83	4.1	0.8	intron	bin3 +	chr2R_4_6230001	chr2R_6230001	0.25	RAL-810
123	chr2R	6492904	6492990	copia	4866	258	20	86	'10-10	67.04	4.0	4.0	intergenic	not near genes	chr2R_20_6490001	chr2R_6490001	0.50	RAL-810
124	chr2R	6682671	6682744	S-element	4	1712	13	73	'7-6	64.68	2.5	3.7	intron,3` UTR	CG9422 +,CR44165 -	chr2R_13_6680001	chr2R_6680001	0.54	RAL-810
125	chr2R	6833005	6833074	1360	3	3383	11	69	'7-4	63.66	3.4	2.5	intron	CG15236 +	chr2R_11_6830001	chr2R_6830001	0.64	RAL-810
126	chr2R	7454567	7454590	jockey	4668	4694	6	23	'2-4	59.09	5.2	1.0	intergenic	Inos -	chr2R_6_7450001	chr2R_7450001	0.33	RAL-810
127	chr2R	7489913	7489966	P-element	2868	2882	4	53	'2-2	50.34	4.3	0.8	intergenic	wech -	chr2R_4_7485001	chr2R_7485001	0.50	RAL-810
128	chr2R	7514002	7514062	Tc3	239	242	8	60	'3-5	62.51	3.4	1.8	3` UTR	CG1603 -	chr2R_8_7510001	chr2R_7510001	0.38	RAL-810
129	chr2R	7543895	7543956	Transpac	291	4920	23	61	'6-17	65.06	3.6	5.0	intron	Corin +	chr2R_23_7540001	chr2R_7540001	0.26	RAL-810
130	chr2R	7546261	7546325	hopper	101	1414	9	64	'3-6	59.91	3.4	2.0	intron	Corin +	chr2R_9_7545001	chr2R_7545001	0.33	RAL-810
131	chr2R	7625458	7625526	Tabor	13	485	4	68	'2-2	65.67	4.3	0.8	intron	CG43340 +	chr2R_4_7625001	chr2R_7625001	0.50	RAL-810
132	chr2R	7764150	7764217	412	7	7542	8	67	'5-3	59.59	3.8	1.7	intron,intron	CG30497 -,CG45093 -	chr2R_8_7760001	chr2R_7760001	0.62	RAL-810
133	chr2R	7888309	7888368	412	495	7075	12	59	'8-4	68.50	2.4	3.5	intergenic	not near genes	chr2R_12_7885001	chr2R_7885001	0.67	RAL-810
134	chr2R	8086863	8086952	Tc3	317	238	5	89	'2-3	76.00	4.8	0.9	3` UTR	sut1 +	chr2R_5_8085001	chr2R_8085001	0.40	RAL-810
135	chr2R	8086871	8086946	1360	3387	2	13	75	'5-8	71.38	5.2	2.1	3` UTR	sut1 +	chr2R_13_8085001	chr2R_8085001	0.38	RAL-810
136	chr2R	8158871	8158950	pogo	2	2099	14	79	'8-6	70.97	4.6	2.5	intergenic	not near genes	chr2R_14_8155001	chr2R_8155001	0.57	RAL-810
137	chr2R	8260538	8260609	Tabor	7316	2	15	71	'9-6	67.60	3.0	3.8	intergenic	CG14759 +,CG2291 -	chr2R_15_8260001	chr2R_8260001	0.60	RAL-810
138	chr2R	8500495	8500513	G6	1746	1764	4	18	'2-2	60.88	3.7	0.9	intron	mtt -	chr2R_4_8500001	chr2R_8500001	0.50	RAL-810
139	chr2R	8560670	8560697	BS	5023	4995	12	27	'8-4	63.74	2.1	3.9	intergenic	not near genes	chr2R_12_8560001	chr2R_8560001	0.67	RAL-810
140	chr2R	9266995	9267071	1360	3387	3388	25	76	'10-15	67.47	4.8	4.3	intron	Pkn -	chr2R_25_9265001	chr2R_9265001	0.40	RAL-810
141	chr2R	9408184	9408235	FB	11	13	5	51	'2-3	55.62	2.8	1.3	intron	wun -	chr2R_5_9405001	chr2R_9405001	0.40	RAL-810
142	chr2R	9527796	9527863	roo	408	8676	16	67	'9-7	71.22	5.2	2.6	intron	brp +	chr2R_16_9525001	chr2R_9525001	0.56	RAL-810
143	chr2R	9684732	9684794	Juan	4024	4205	11	62	'5-6	66.67	5.6	1.7	intergenic	not near genes	chr2R_11_9680001	chr2R_9680001	0.45	RAL-810
144	chr2R	10112402	10112478	pogo	3	2097	22	76	'9-13	65.33	5.6	3.3	intron	Pfk +	chr2R_22_10110001	chr2R_10110001	0.41	RAL-810
145	chr2R	10279124	10279190	P-element	7	2884	12	66	'4-8	52.22	2.4	3.5	intron	CAP +	chr2R_12_10275001	chr2R_10275001	0.33	RAL-810
146	chr2R	10708010	10708081	roo	410	11	11	71	'7-4	65.33	3.2	2.6	exon	stan +	chr2R_11_10705001	chr2R_10705001	0.64	RAL-810
147	chr2R	10874721	10874767	P-element	2864	2883	14	46	'8-6	44.04	5.7	2.1	5` UTR	CG30015 -	chr2R_14_10870001	chr2R_10870001	0.57	RAL-810
148	chr2R	11384711	11384756	I-element	7	5344	14	45	'7-7	61.14	4.2	2.7	intergenic	sprt -	chr2R_14_11380001	chr2R_11380001	0.50	RAL-810
149	chr2R	11418679	11418699	297	6956	395	8	20	'4-4	67.90	4.5	1.5	intron	Drip -	chr2R_8_11415001	chr2R_11415001	0.50	RAL-810
150	chr2R	11635496	11635558	Ivk	2	5375	22	62	'12-10	61.53	4.2	4.2	intron	CG9005 -	chr2R_22_11635001	chr2R_11635001	0.55	RAL-810
151	chr2R	12049382	12049411	Doc	8	37	7	29	'3-4	70.80	6.9	0.9	3` UTR	Drep-1 +	chr2R_7_12045001	chr2R_12045001	0.43	RAL-810
152	chr2R	12185332	12185405	accord	7378	1	9	73	'3-6	65.90	10.6	0.8	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_9_12185001	chr2R_12185001	0.33	RAL-810
153	chr2R	12290196	12290269	roo	1	402	20	73	'12-8	67.47	4.8	3.4	intron	CG42700 +	chr2R_20_12290001	chr2R_12290001	0.60	RAL-810
154	chr2R	12809511	12809579	flea	4761	246	13	68	'5-8	66.22	2.1	4.2	intergenic	not near genes	chr2R_13_12805001	chr2R_12805001	0.38	RAL-810
155	chr2R	12868899	12868968	P-element	5	3	19	69	'12-7	44.76	6.4	2.6	intron,intron	CG17574 -,CR45140 +	chr2R_19_12865001	chr2R_12865001	0.63	RAL-810
156	chr2R	13035481	13035548	P-element	2883	4	15	67	'7-8	45.29	3.7	3.2	intergenic	not near genes	chr2R_15_13035001	chr2R_13035001	0.47	RAL-810
157	chr2R	13385724	13385808	roo	410	8662	24	84	'15-9	67.71	5.2	3.9	intergenic	not near genes	chr2R_24_13385001	chr2R_13385001	0.62	RAL-810
158	chr2R	13416317	13416394	412	2	492	18	77	'9-9	65.95	5.2	2.9	intron	CG42321 -	chr2R_18_13415001	chr2R_13415001	0.50	RAL-810
159	chr2R	13558254	13558304	jockey	4977	12	5	50	'2-3	49.33	0.4	3.6	intergenic	snoRNA:2R:9445410 -,CG13334 +,snoRNA:2R:9445205 -	chr2R_5_13555001	chr2R_13555001	0.40	RAL-810
160	chr2R	13585457	13585511	Juan	4030	4201	18	54	'8-10	65.63	4.5	3.3	intron,intron	CG6191 -,CG45088 -	chr2R_18_13585001	chr2R_13585001	0.44	RAL-810
161	chr2R	13691288	13691359	hobo	2938	6	10	71	'5-5	67.25	4.9	1.7	intron	fas +	chr2R_10_13690001	chr2R_13690001	0.50	RAL-810
162	chr2R	13741987	13742045	X-element	4711	9	11	58	'6-5	60.01	5.0	1.8	intron	fas +	chr2R_11_13740001	chr2R_13740001	0.55	RAL-810
163	chr2R	13934417	13934472	FB	3	19	11	55	'6-5	67.84	3.7	2.3	intron	shot -	chr2R_11_13930001	chr2R_13930001	0.55	RAL-810
164	chr2R	14023543	14023589	pogo	2070	7	12	46	'3-9	71.50	2.4	3.5	intron	mam +	chr2R_12_14020001	chr2R_14020001	0.25	RAL-810
165	chr2R	14246973	14247053	297	6972	6580	7	80	'3-4	69.84	3.9	1.4	5` UTR	Mdr50 +	chr2R_7_14245001	chr2R_14245001	0.43	RAL-810
166	chr2R	14330038	14330106	412	7544	11	18	68	'13-5	60.30	3.8	3.8	intron	Shroom +	chr2R_18_14330001	chr2R_14330001	0.72	RAL-810
167	chr2R	14562125	14562202	Burdock	6140	6390	13	77	'12-1	69.59	1.8	4.6	intron	ttv +	chr2R_13_14560001	chr2R_14560001	0.92	RAL-810
168	chr2R	14706721	14706791	hobo	2	2934	17	70	'12-5	62.41	4.2	3.3	intron	mspo -	chr2R_17_14705001	chr2R_14705001	0.71	RAL-810
169	chr2R	14930781	14930834	297	6583	394	8	53	'4-4	71.12	2.2	2.5	exon	CG10253 -	chr2R_8_14930001	chr2R_14930001	0.50	RAL-810
170	chr2R	15006960	15007020	hobo	2924	2	10	60	'5-5	63.76	4.2	1.9	intergenic	not near genes	chr2R_10_15005001	chr2R_15005001	0.50	RAL-810
171	chr2R	15011194	15011219	F-element	10	33	10	25	'4-6	57.42	4.4	1.9	intergenic	hbs +	chr2R_10_15010001	chr2R_15010001	0.40	RAL-810
172	chr2R	15104786	15104863	297	393	6585	8	77	'5-3	68.33	3.3	1.9	intergenic	not near genes	chr2R_8_15100001	chr2R_15100001	0.62	RAL-810
173	chr2R	15610327	15610394	gypsy5	14	412	11	67	'2-9	63.14	3.3	2.6	intergenic	not near genes	chr2R_11_15610001	chr2R_15610001	0.18	RAL-810
174	chr2R	15610838	15610986	P-element	2884	2862	10	148	'1-9	44.76	3.9	2.0	intergenic	not near genes	chr2R_10_15610001	chr2R_15610001	0.10	RAL-810
175	chr2R	15613686	15613713	P-element	2860	9	8	27	'3-5	41.04	3.6	1.7	intergenic	CG42524 +	chr2R_8_15610001	chr2R_15610001	0.38	RAL-810
176	chr2R	15715712	15715783	mdg3	248	5262	17	71	'11-6	66.11	5.7	2.5	intergenic	not near genes	chr2R_17_15715001	chr2R_15715001	0.65	RAL-810
177	chr2R	15880302	15880369	pogo	2097	13	12	67	'8-4	66.86	3.7	2.6	intron	sli -	chr2R_12_15880001	chr2R_15880001	0.67	RAL-810
178	chr2R	16221166	16221249	Transpac	4918	310	19	83	'10-9	65.90	4.5	3.5	intron	mrj -	chr2R_19_16220001	chr2R_16220001	0.53	RAL-810
179	chr2R	16325778	16325854	roo	2	405	16	76	'8-8	66.68	3.2	3.8	3` UTR	Vha44 -	chr2R_16_16325001	chr2R_16325001	0.50	RAL-810
180	chr2R	16331916	16331964	pogo	2088	23	10	48	'9-1	69.55	5.5	1.5	intron	Vha44 -	chr2R_10_16330001	chr2R_16330001	0.90	RAL-810
181	chr2R	16356076	16356100	copia	4895	2	8	24	'6-2	70.33	6.1	1.1	intergenic	not near genes	chr2R_8_16355001	chr2R_16355001	0.75	RAL-810
182	chr2R	16882618	16882687	roo	2	399	13	69	'6-7	66.59	4.9	2.2	intron,intron	CG8910 -,CG6472 +	chr2R_13_16880001	chr2R_16880001	0.46	RAL-810
183	chr2R	16895859	16895903	mdg1	12	7435	8	44	'3-5	66.33	2.9	2.1	intergenic	CG8910 -	chr2R_8_16895001	chr2R_16895001	0.38	RAL-810
184	chr2R	16983553	16983622	hobo	2	2934	11	69	'10-1	65.12	3.6	2.4	intron	Cbp53E +	chr2R_11_16980001	chr2R_16980001	0.91	RAL-810
185	chr2R	17120479	17120558	Transpac	4922	310	15	79	'6-9	63.64	1.8	5.4	intergenic	Amy-p -	chr2R_15_17120001	chr2R_17120001	0.40	RAL-810
186	chr2R	17324946	17324980	jockey	4679	4713	7	34	'4-3	68.45	3.7	1.5	intron	mbl +	chr2R_7_17320001	chr2R_17320001	0.57	RAL-810
187	chr2R	17325307	17325385	roo	8663	406	17	78	'8-9	62.88	4.0	3.4	intron	mbl +	chr2R_17_17325001	chr2R_17325001	0.47	RAL-810
188	chr2R	17331756	17331787	I-element	5340	4872	4	31	'1-3	56.67	3.9	0.8	intron	mbl +	chr2R_4_17330001	chr2R_17330001	0.25	RAL-810
189	chr2R	17345573	17345607	jockey	4810	4844	12	34	'4-8	62.29	5.3	1.9	intron	mbl +	chr2R_12_17345001	chr2R_17345001	0.33	RAL-810
190	chr2R	17782184	17782214	pogo	2	32	12	30	'6-6	63.27	6.5	1.6	intergenic	CG33981 -,fab1 -	chr2R_12_17780001	chr2R_17780001	0.50	RAL-810
191	chr2R	17951338	17951424	blood	379	7008	18	86	'9-9	63.58	3.3	4.2	intergenic	not near genes	chr2R_18_17950001	chr2R_17950001	0.50	RAL-810
192	chr2R	18907113	18907182	mdg1	51	7443	11	69	'5-6	60.73	3.7	2.3	intron	sano +	chr2R_11_18905001	chr2R_18905001	0.45	RAL-810
193	chr2R	19349873	19349953	I-element	5168	5346	10	80	'5-5	59.33	3.6	2.2	5` UTR	Rgk1 -	chr2R_10_19345001	chr2R_19345001	0.50	RAL-810
194	chr2R	19619889	19619951	hopper	1414	1398	13	62	'11-2	66.19	4.4	2.4	intron	sm -	chr2R_13_19615001	chr2R_19615001	0.85	RAL-810
195	chr2R	19729118	19729201	297	394	6580	9	83	'8-1	66.96	4.7	1.6	intergenic	5SrRNA:CR33452 -	chr2R_9_19725001	chr2R_19725001	0.89	RAL-810
196	chr2R	19776613	19776628	jockey	4572	4557	4	15	'1-3	59.00	2.8	1.1	intergenic	not near genes	chr2R_4_19775001	chr2R_19775001	0.25	RAL-810
197	chr2R	19885585	19885603	I-element	5343	5325	6	18	'4-2	59.24	5.1	1.0	intergenic	not near genes	chr2R_6_19885001	chr2R_19885001	0.67	RAL-810
198	chr2R	20290567	20290701	412	464	430	5	134	'4-1	63.91	4.8	0.9	intron	Cpr56F -	chr2R_5_20290001	chr2R_20290001	0.80	RAL-810
199	chr2R	20610486	20610547	mdg1	7446	7045	13	61	'8-5	60.05	3.9	2.7	intron	Hil -	chr2R_13_20610001	chr2R_20610001	0.62	RAL-810
200	chr2R	20887312	20887386	hopper	2	1410	17	74	'7-10	63.44	4.3	3.2	intron	otp -	chr2R_17_20885001	chr2R_20885001	0.41	RAL-810
201	chr2R	20901476	20901553	roo	8662	403	11	77	'6-5	70.29	5.5	1.7	intron	otp -	chr2R_11_20900001	chr2R_20900001	0.55	RAL-810
202	chr2R	21252996	21253013	mdg1	7044	24	8	17	'5-3	56.90	6.8	1.0	intergenic	not near genes	chr2R_8_21250001	chr2R_21250001	0.62	RAL-810
203	chr2R	21349900	21349928	pogo	12	2	10	28	'7-3	69.68	3.8	2.1	intron	CG17974 -	chr2R_10_21345001	chr2R_21345001	0.70	RAL-810
204	chr2R	22616873	22616931	BS	5002	5082	18	58	'12-6	61.54	4.6	3.2	intron	CG33143 +	chr2R_18_22615001	chr2R_22615001	0.67	RAL-810
205	chr2R	22785030	22785294	3S18	310	5766	6	264	'5-1	61.40	7.9	0.7	intron	CG42260 -	chr2R_6_22785001	chr2R_22785001	0.83	RAL-810
206	chr2R	22796765	22796830	S-element	1699	1715	11	65	'1-10	65.80	4.9	1.9	intron	CG42260 -	chr2R_11_22795001	chr2R_22795001	0.09	RAL-810
207	chr2R	22990189	22990263	roo	409	6	11	74	'7-4	65.61	5.3	1.7	intron	twi +	chr2R_11_22990001	chr2R_22990001	0.64	RAL-810
208	chr2R	23426585	23426622	P-element	15	2863	8	37	'5-3	39.32	6.5	1.1	intron	CG9815 -	chr2R_8_23425001	chr2R_23425001	0.62	RAL-810
209	chr2R	23874438	23874506	I-element	5347	2	18	68	'7-11	62.10	5.4	2.8	intron	ken +	chr2R_18_23870001	chr2R_23870001	0.39	RAL-810
210	chr2R	24441284	24441331	hobo	2925	13	11	47	'4-7	67.61	2.1	3.5	intergenic	not near genes	chr2R_11_24440001	chr2R_24440001	0.36	RAL-810
211	chr2R	24881677	24881753	P-element	1	1	20	76	'13-7	50.13	4.4	3.7	3` UTR,intron	CR43466 -,NKAIN +	chr2R_20_24880001	chr2R_24880001	0.65	RAL-810
212	chr3L	46826	46989	FB	77	7	16	163	'1-15	63.62	4.4	3.0	intergenic	not near genes	chr3L_16_45001	chr3L_45001	0.06	RAL-810
213	chr3L	792508	792589	Transpac	5228	4919	24	81	'8-16	63.82	5.0	4.0	intergenic	not near genes	chr3L_24_790001	chr3L_790001	0.33	RAL-810
214	chr3L	1999040	1999064	jockey	4966	4988	8	24	'5-3	61.50	2.6	2.2	intergenic	not near genes	chr3L_8_1995001	chr3L_1995001	0.62	RAL-810
215	chr3L	2485889	2485961	jockey	4993	4674	16	72	'11-5	61.96	1.9	5.5	intron	CG45186 +	chr3L_16_2485001	chr3L_2485001	0.69	RAL-810
216	chr3L	3107941	3108014	Ivk	5376	5295	13	73	'5-8	63.36	3.0	3.2	intergenic	not near genes	chr3L_13_3105001	chr3L_3105001	0.38	RAL-810
217	chr3L	3438633	3438653	I-element	5327	5347	7	20	'3-4	64.19	4.2	1.3	intron	eIF5B -	chr3L_7_3435001	chr3L_3435001	0.43	RAL-810
218	chr3L	3593960	3594012	1360	3364	3387	10	52	'4-6	67.27	3.4	2.3	intron	Eip63E +	chr3L_10_3590001	chr3L_3590001	0.40	RAL-810
219	chr3L	4341245	4341316	FB	4	2	12	71	'5-7	64.09	3.7	2.6	intron	Cip4 -	chr3L_12_4340001	chr3L_4340001	0.42	RAL-810
220	chr3L	4662187	4662245	Burdock	1	6368	11	58	'7-4	69.42	4.4	2.0	intron	axo -	chr3L_11_4660001	chr3L_4660001	0.64	RAL-810
221	chr3L	4681018	4681091	Stalker2	7646	7248	23	73	'11-12	58.89	3.6	5.0	intron	axo -	chr3L_23_4680001	chr3L_4680001	0.48	RAL-810
222	chr3L	4807336	4807416	297	6974	6582	12	80	'7-5	68.33	3.2	2.9	5` UTR	CG18808 -	chr3L_12_4805001	chr3L_4805001	0.58	RAL-810
223	chr3L	5063340	5063403	412	478	3	11	63	'6-5	68.01	3.5	2.4	intron	Con -	chr3L_11_5060001	chr3L_5060001	0.55	RAL-810
224	chr3L	5102191	5102216	jockey	4669	4696	5	25	'2-3	65.32	0.6	3.1	intergenic	not near genes	chr3L_5_5100001	chr3L_5100001	0.40	RAL-810
225	chr3L	5322403	5322475	roo	8663	9062	16	72	'9-7	67.40	3.5	3.6	intergenic	not near genes	chr3L_16_5320001	chr3L_5320001	0.56	RAL-810
226	chr3L	5454554	5454578	roo	8683	8664	5	24	'2-3	64.56	1.6	1.9	intergenic	not near genes	chr3L_5_5450001	chr3L_5450001	0.40	RAL-810
227	chr3L	5537699	5537756	jockey	4675	4974	11	57	'6-5	64.63	5.2	1.8	intergenic	not near genes	chr3L_11_5535001	chr3L_5535001	0.55	RAL-810
228	chr3L	7154422	7154505	opus	7114	7500	12	83	'5-7	66.68	4.0	2.4	intron	corn -	chr3L_12_7150001	chr3L_7150001	0.42	RAL-810
229	chr3L	7841819	7841882	roo	1	391	15	63	'9-6	65.42	4.9	2.5	intron	Pdp1 -	chr3L_15_7840001	chr3L_7840001	0.60	RAL-810
230	chr3L	7884012	7884078	FB	4	7	8	66	'4-4	65.02	3.2	1.9	intron	CG32365 +	chr3L_8_7880001	chr3L_7880001	0.50	RAL-810
231	chr3L	7997631	7997650	jockey	4980	4961	7	19	'4-3	72.90	6.4	0.9	intron	nmo +	chr3L_7_7995001	chr3L_7995001	0.57	RAL-810
232	chr3L	8358843	8358918	1360	3388	2	19	75	'14-5	67.71	3.4	4.3	intron	Idh -	chr3L_19_8355001	chr3L_8355001	0.74	RAL-810
233	chr3L	8655316	8655386	pogo	2093	4	11	70	'1-10	63.84	5.3	1.7	intergenic	not near genes	chr3L_11_8655001	chr3L_8655001	0.09	RAL-810
234	chr3L	9243112	9243176	roo	9058	8664	9	64	'6-3	69.56	2.9	2.3	intergenic	not near genes	chr3L_9_9240001	chr3L_9240001	0.67	RAL-810
235	chr3L	9255678	9255736	412	474	3	4	58	'2-2	64.22	5.2	0.6	intron	GluRIB +	chr3L_4_9255001	chr3L_9255001	0.50	RAL-810
236	chr3L	9321622	9321640	roo	411	393	8	18	'2-6	64.33	5.9	1.2	intergenic	not near genes	chr3L_8_9320001	chr3L_9320001	0.25	RAL-810
237	chr3L	9381472	9381499	P-element	3	2857	5	27	'2-3	46.51	8.4	0.5	intergenic	CR43481 +,Hsp23 +	chr3L_5_9380001	chr3L_9380001	0.40	RAL-810
238	chr3L	9493065	9493139	pogo	2100	6	12	74	'1-11	64.60	3.4	2.7	intergenic	not near genes	chr3L_12_9490001	chr3L_9490001	0.08	RAL-810
239	chr3L	9505301	9505359	P-element	7	10	13	58	'7-6	44.46	6.3	1.8	5` UTR	path -	chr3L_13_9505001	chr3L_9505001	0.54	RAL-810
240	chr3L	9546728	9546809	Rt1b	122	122	4	81	'3-1	60.43	2.7	1.1	intergenic	CG42673 +	chr3L_4_9545001	chr3L_9545001	0.75	RAL-810
241	chr3L	9762262	9762281	jockey	4985	4969	7	19	'3-4	60.38	5.4	1.1	intergenic	not near genes	chr3L_7_9760001	chr3L_9760001	0.43	RAL-810
242	chr3L	10015693	10015771	Transpac	308	1	7	78	'3-4	65.28	4.0	1.4	intron	dpr6 +	chr3L_7_10015001	chr3L_10015001	0.43	RAL-810
243	chr3L	10475997	10476058	FB	9	7	14	61	'8-6	64.95	3.0	3.5	intergenic	not near genes	chr3L_14_10475001	chr3L_10475001	0.57	RAL-810
244	chr3L	10852080	10852128	Juan	4201	2	9	48	'5-4	64.34	4.0	1.8	intergenic	not near genes	chr3L_9_10850001	chr3L_10850001	0.56	RAL-810
245	chr3L	10923067	10923142	Burdock	250	6136	21	75	'10-11	70.08	3.4	4.8	intergenic	not near genes	chr3L_21_10920001	chr3L_10920001	0.48	RAL-810
246	chr3L	11130845	11130904	412	7540	7068	12	59	'5-7	63.29	4.0	2.4	intron,5` UTR	CG42575 +,nol +	chr3L_12_11130001	chr3L_11130001	0.42	RAL-810
247	chr3L	11205986	11206060	P-element	2	2886	10	74	'5-5	54.27	4.8	1.7	5` UTR	Plod -	chr3L_10_11205001	chr3L_11205001	0.50	RAL-810
248	chr3L	11553653	11553724	1360	3384	3386	12	71	'2-10	68.57	4.5	2.2	intron	Mob2 -	chr3L_12_11550001	chr3L_11550001	0.17	RAL-810
249	chr3L	11671844	11671868	Tirant	8	31	7	24	'4-3	64.56	5.7	1.0	intron	CG32085 -	chr3L_7_11670001	chr3L_11670001	0.57	RAL-810
250	chr3L	11953334	11953350	F-element	478	494	6	16	'3-3	63.02	7.7	0.7	intergenic	obst-G -	chr3L_6_11950001	chr3L_11950001	0.50	RAL-810
251	chr3L	12159693	12159757	Idefix	12	7386	4	64	'3-1	67.33	4.3	0.8	intron	CG9760 -	chr3L_4_12155001	chr3L_12155001	0.75	RAL-810
252	chr3L	12603929	12604007	Burdock	252	1	18	78	'8-10	66.52	4.3	3.4	intergenic	not near genes	chr3L_18_12600001	chr3L_12600001	0.44	RAL-810
253	chr3L	12716542	12716564	Juan	4045	4023	8	22	'4-4	51.67	0.0	8.0	intergenic	not near genes	chr3L_8_12715001	chr3L_12715001	0.50	RAL-810
254	chr3L	12936467	12936533	hopper	1413	1402	9	66	'6-3	67.79	3.9	1.8	intergenic	not near genes	chr3L_9_12935001	chr3L_12935001	0.67	RAL-810
255	chr3L	13651779	13651850	hobo	2710	7	7	71	'3-4	61.05	2.7	1.9	intron	bru-3 -	chr3L_7_13650001	chr3L_13650001	0.43	RAL-810
256	chr3L	13776077	13776154	gypsy10	5640	346	7	77	'5-2	64.26	4.3	1.3	intron	bru-3 -	chr3L_7_13775001	chr3L_13775001	0.71	RAL-810
257	chr3L	13777213	13777288	flea	5013	4761	15	75	'8-7	66.07	2.4	4.4	intron	bru-3 -	chr3L_15_13775001	chr3L_13775001	0.53	RAL-810
258	chr3L	13836564	13836586	412	343	365	4	22	'2-2	57.88	11.3	0.3	intergenic	not near genes	chr3L_4_13835001	chr3L_13835001	0.50	RAL-810
259	chr3L	14049976	14050059	pogo	1	2100	24	83	'9-15	64.24	2.0	8.0	intergenic	blue -	chr3L_24_14045001	chr3L_14045001	0.38	RAL-810
260	chr3L	14229767	14229844	pogo	6	2100	25	77	'9-16	68.89	2.1	8.1	intron	nuf +	chr3L_25_14225001	chr3L_14225001	0.36	RAL-810
261	chr3L	14292750	14292822	roo	400	8664	11	72	'5-6	67.26	3.2	2.6	intron	fz +	chr3L_11_14290001	chr3L_14290001	0.45	RAL-810
262	chr3L	14551079	14551096	pogo	2099	2082	8	17	'5-3	62.64	8.6	0.8	intergenic	CG9238 -	chr3L_8_14550001	chr3L_14550001	0.62	RAL-810
263	chr3L	15117238	15117315	roo	8670	411	22	77	'11-11	65.60	4.8	3.8	intron	Cep135 +	chr3L_22_15115001	chr3L_15115001	0.50	RAL-810
264	chr3L	15197836	15197907	412	12	495	14	71	'4-10	66.94	4.0	2.8	intergenic	not near genes	chr3L_14_15195001	chr3L_15195001	0.29	RAL-810
265	chr3L	15415154	15415227	copia	251	4872	11	73	'7-4	64.97	3.4	2.5	intergenic	not near genes	chr3L_11_15415001	chr3L_15415001	0.64	RAL-810
266	chr3L	15741509	15741581	roo	2	402	16	72	'11-5	65.61	4.1	3.1	intergenic	not near genes	chr3L_16_15740001	chr3L_15740001	0.69	RAL-810
267	chr3L	16071965	16072017	roo	9057	14	5	52	'3-2	63.01	3.8	1.0	intron	Mbs +	chr3L_5_16070001	chr3L_16070001	0.60	RAL-810
268	chr3L	16855016	16855097	copia	256	4869	18	81	'9-9	68.96	3.9	3.7	intron,intron	Rh4 -,sina +	chr3L_18_16855001	chr3L_16855001	0.50	RAL-810
269	chr3L	17189202	17189281	mdg1	7459	7040	11	79	'8-3	65.89	2.5	3.1	intron	Rbp6 -	chr3L_11_17185001	chr3L_17185001	0.73	RAL-810
270	chr3L	17646446	17646524	roo	407	8666	14	78	'6-8	63.33	4.3	2.6	5` UTR	CG43085 -	chr3L_14_17645001	chr3L_17645001	0.43	RAL-810
271	chr3L	17947983	17948061	297	394	4	12	78	'7-5	68.24	4.6	2.1	intergenic	CR45393 -	chr3L_12_17945001	chr3L_17945001	0.58	RAL-810
272	chr3L	18065643	18065663	jockey	26	6	4	20	'2-2	66.66	3.1	1.0	intergenic	not near genes	chr3L_4_18065001	chr3L_18065001	0.50	RAL-810
273	chr3L	18268497	18268551	opus	16	486	10	54	'5-5	71.73	2.3	3.0	intergenic	not near genes	chr3L_10_18265001	chr3L_18265001	0.50	RAL-810
274	chr3L	18392153	18392206	BS	5084	3	6	53	'2-4	57.78	2.6	1.7	intergenic	not near genes	chr3L_6_18390001	chr3L_18390001	0.33	RAL-810
275	chr3L	18455502	18455574	roo	408	6	16	72	'12-4	62.63	3.0	4.0	intergenic	not near genes	chr3L_16_18455001	chr3L_18455001	0.75	RAL-810
276	chr3L	18684292	18684359	blood	7013	367	22	67	'15-7	61.32	5.8	3.2	3` UTR	Cyp12c1 -	chr3L_22_18680001	chr3L_18680001	0.68	RAL-810
277	chr3L	19089339	19089397	pogo	2083	2	15	58	'5-10	65.51	4.8	2.6	intergenic	not near genes	chr3L_15_19085001	chr3L_19085001	0.33	RAL-810
278	chr3L	19191453	19191531	roo	406	8663	11	78	'5-6	70.27	2.7	3.0	intron	fz2 -	chr3L_11_19190001	chr3L_19190001	0.45	RAL-810
279	chr3L	19215037	19215115	opus	491	7113	6	78	'2-4	67.11	4.3	1.1	intron	fz2 -	chr3L_6_19215001	chr3L_19215001	0.33	RAL-810
280	chr3L	19257773	19257857	opus	7500	7113	12	84	'5-7	70.39	4.6	2.1	3` UTR	nes -	chr3L_12_19255001	chr3L_19255001	0.42	RAL-810
281	chr3L	19274734	19274803	hopper	7	5	14	69	'10-4	66.14	2.3	4.2	intergenic	not near genes	chr3L_14_19270001	chr3L_19270001	0.71	RAL-810
282	chr3L	19274805	19274879	transib2	6	2823	14	74	'7-7	64.73	2.2	4.4	intergenic	not near genes	chr3L_14_19270001	chr3L_19270001	0.50	RAL-810
283	chr3L	19339398	19339428	Tc1	31	1	10	30	'5-5	65.69	3.1	2.4	intergenic	not near genes	chr3L_10_19335001	chr3L_19335001	0.50	RAL-810
284	chr3L	19349872	19349922	jockey	3	4973	8	50	'4-4	62.91	2.7	2.2	intron	CG32206 -	chr3L_8_19345001	chr3L_19345001	0.50	RAL-810
285	chr3L	19398470	19398546	roo	3	411	18	76	'4-14	61.64	4.2	3.5	intron	CG32206 -	chr3L_18_19395001	chr3L_19395001	0.22	RAL-810
286	chr3L	19497864	19497886	jockey	4986	4964	5	22	'3-2	65.60	5.3	0.8	intergenic	CG9449 -,CG9451 -	chr3L_5_19495001	chr3L_19495001	0.60	RAL-810
287	chr3L	19562211	19562256	hobo	7	2913	10	45	'6-4	64.97	4.0	2.0	intergenic	not near genes	chr3L_10_19560001	chr3L_19560001	0.60	RAL-810
288	chr3L	19791472	19791546	P-element	2886	2884	12	74	'7-5	60.98	7.1	1.5	5` UTR,intron	CG42637 -,Gyc76C -	chr3L_12_19790001	chr3L_19790001	0.58	RAL-810
289	chr3L	19951199	19951253	Ivk	4	5364	11	54	'5-6	68.27	7.4	1.3	intron	Ac76E +	chr3L_11_19950001	chr3L_19950001	0.45	RAL-810
290	chr3L	20198295	20198348	P-element	10	9	7	53	'6-1	53.38	3.8	1.5	5` UTR	CG42674 -	chr3L_7_20195001	chr3L_20195001	0.86	RAL-810
291	chr3L	20290683	20290764	roo	8664	409	19	81	'10-9	68.60	5.3	3.0	intron	gogo -	chr3L_19_20290001	chr3L_20290001	0.53	RAL-810
292	chr3L	20361850	20361878	Doc	31	4	8	28	'3-5	63.11	4.7	1.4	3` UTR	Toll-9 -	chr3L_8_20360001	chr3L_20360001	0.38	RAL-810
293	chr3L	20747102	20747178	Burdock	6134	6384	8	76	'7-1	64.46	4.7	1.4	intergenic	not near genes	chr3L_8_20745001	chr3L_20745001	0.88	RAL-810
294	chr3L	20893573	20893651	mdg1	7039	7459	10	78	'6-4	65.47	3.9	2.0	intergenic	not near genes	chr3L_10_20890001	chr3L_20890001	0.60	RAL-810
295	chr3L	20925760	20925841	Transpac	4919	310	14	81	'5-9	66.60	5.3	2.2	intergenic	fng -	chr3L_14_20925001	chr3L_20925001	0.36	RAL-810
296	chr3L	21093157	21093219	Ivk	5372	4	14	62	'8-6	66.11	3.7	3.0	intron	ko -	chr3L_14_21090001	chr3L_21090001	0.57	RAL-810
297	chr3L	21097124	21097156	mdg3	5251	30	11	32	'7-4	65.12	12.5	0.8	intron	ko -	chr3L_11_21095001	chr3L_21095001	0.64	RAL-810
298	chr3L	21135481	21135555	P-element	2	1	15	74	'10-5	52.25	5.7	2.2	exon	CG10565 -	chr3L_15_21135001	chr3L_21135001	0.67	RAL-810
299	chr3L	21372515	21372589	pogo	2095	2	16	74	'9-7	69.62	4.0	3.2	intergenic	not near genes	chr3L_16_21370001	chr3L_21370001	0.56	RAL-810
300	chr3L	21395430	21395504	pogo	7	2098	18	74	'10-8	66.43	3.2	4.3	intron	rgn +	chr3L_18_21395001	chr3L_21395001	0.56	RAL-810
301	chr3L	21490855	21490938	Bari1	1707	2	28	83	'12-16	63.12	6.5	3.7	intergenic	Neu2 -	chr3L_28_21490001	chr3L_21490001	0.43	RAL-810
302	chr3L	21888617	21888689	roo	9068	8668	17	72	'7-10	63.25	4.4	3.1	intron	mub +	chr3L_17_21885001	chr3L_21885001	0.41	RAL-810
303	chr3L	22040559	22040615	Max-element	8528	15	10	56	'5-5	64.46	4.9	1.7	intron	Oct-TyrR +	chr3L_10_22040001	chr3L_22040001	0.50	RAL-810
304	chr3L	22212642	22212700	jockey	4673	4988	11	58	'4-7	55.88	2.8	2.9	intron	olf413 +	chr3L_11_22210001	chr3L_22210001	0.36	RAL-810
305	chr3L	22280762	22280839	412	494	5	14	77	'7-7	64.91	5.2	2.3	intron	srpk79D +	chr3L_14_22280001	chr3L_22280001	0.50	RAL-810
306	chr3L	22481242	22481317	roo	406	8666	13	75	'7-6	67.12	3.5	2.9	intergenic	not near genes	chr3L_13_22480001	chr3L_22480001	0.54	RAL-810
307	chr3L	22501395	22501478	mdg3	248	5252	19	83	'8-11	66.26	4.2	3.7	intergenic	CG43312 +	chr3L_19_22500001	chr3L_22500001	0.42	RAL-810
308	chr3L	22505415	22505486	roo	13	412	14	71	'2-12	65.75	3.2	3.3	intergenic	CG43329 -	chr3L_14_22505001	chr3L_22505001	0.14	RAL-810
309	chr3L	22518998	22519027	pogo	2100	2070	6	29	'2-4	68.88	4.0	1.2	intergenic	not near genes	chr3L_6_22515001	chr3L_22515001	0.33	RAL-810
310	chr3L	22529754	22529820	roo	402	8672	12	66	'6-6	64.51	3.4	2.7	intergenic	not near genes	chr3L_12_22525001	chr3L_22525001	0.50	RAL-810
311	chr3L	22568116	22568151	jockey	4666	4701	10	35	'6-4	64.26	3.1	2.4	intergenic	not near genes	chr3L_10_22565001	chr3L_22565001	0.60	RAL-810
312	chr3L	22635695	22635760	hopper	11	3	7	65	'4-3	62.90	3.6	1.5	intron	CG14459 -	chr3L_7_22635001	chr3L_22635001	0.57	RAL-810
313	chr3L	22638798	22638856	Juan	4197	4088	9	58	'2-7	61.78	3.1	2.2	intergenic	not near genes	chr3L_9_22635001	chr3L_22635001	0.22	RAL-810
314	chr3L	22737361	22737379	mdg3	5251	5269	5	18	'2-3	61.74	8.0	0.6	intron	CG11241 -	chr3L_5_22735001	chr3L_22735001	0.40	RAL-810
315	chr3L	22745040	22745115	412	490	3	24	75	'10-14	67.47	5.4	3.8	intron	CG7369 +	chr3L_24_22745001	chr3L_22745001	0.42	RAL-810
316	chr3L	23123520	23123602	flea	255	4756	6	82	'1-5	68.00	4.1	1.2	intergenic	not near genes	chr3L_6_23120001	chr3L_23120001	0.17	RAL-810
317	chr3L	23583081	23583101	S-element	1461	1481	5	20	'2-3	60.95	8.4	0.5	intron	AGO3 +	chr3L_5_23580001	chr3L_23580001	0.40	RAL-810
318	chr3L	24272110	24272126	gypsy11	4028	68	4	16	'3-1	80.62	5.0	0.7	intron	Snap25 +	chr3L_4_24270001	chr3L_24270001	0.75	RAL-810
319	chr3L	24763661	24763736	297	7	394	11	75	'5-6	72.10	3.5	2.4	intron	scro +	chr3L_11_24760001	chr3L_24760001	0.45	RAL-810
320	chr3L	25212763	25212779	Tabor	7296	473	4	16	'3-1	64.00	1.9	1.4	intergenic	not near genes	chr3L_4_25210001	chr3L_25210001	0.75	RAL-810
321	chr3L	25926351	25926427	Tabor	7323	2	19	76	'12-7	60.55	4.8	3.3	intron	CG40178 -	chr3L_19_25925001	chr3L_25925001	0.63	RAL-810
322	chr3L	26380649	26380666	HMS-Beagle2	19	6919	4	17	'2-2	56.00	1.1	1.9	intergenic	not near genes	chr3L_4_26380001	chr3L_26380001	0.50	RAL-810
323	chr3L	27174919	27174993	pogo	2091	3	15	74	'7-8	66.09	3.1	3.7	intergenic	not near genes	chr3L_15_27170001	chr3L_27170001	0.47	RAL-810
324	chr3L	27269493	27269569	Burdock	3	6389	15	76	'9-6	67.81	4.2	2.9	intergenic	not near genes	chr3L_15_27265001	chr3L_27265001	0.60	RAL-810
325	chr3R	446639	446716	Transpac	304	4918	8	77	'5-3	68.00	2.2	2.5	intergenic	not near genes	chr3R_8_445001	chr3R_445001	0.62	RAL-810
326	chr3R	1521445	1521477	P-element	4	2886	9	32	'5-4	50.83	0.0	9.0	intergenic	not near genes	chr3R_9_1520001	chr3R_1520001	0.56	RAL-810
327	chr3R	3352274	3352319	copia	4888	239	5	45	'3-2	61.87	2.0	1.7	intron	spok +	chr3R_5_3350001	chr3R_3350001	0.60	RAL-810
328	chr3R	4420108	4420184	roo	2	406	19	76	'8-11	69.37	4.4	3.5	intergenic	not near genes	chr3R_19_4420001	chr3R_4420001	0.42	RAL-810
329	chr3R	4695071	4695131	roo	398	8674	10	60	'4-6	63.70	4.3	1.9	intron	CG43427 +	chr3R_10_4695001	chr3R_4695001	0.40	RAL-810
330	chr3R	5055451	5055532	pogo	2	2100	19	81	'10-9	66.18	3.9	3.9	intergenic	not near genes	chr3R_19_5055001	chr3R_5055001	0.53	RAL-810
331	chr3R	5385364	5385444	mdg3	5251	5496	22	80	'14-8	64.53	4.2	4.2	intron	kkv -	chr3R_22_5385001	chr3R_5385001	0.64	RAL-810
332	chr3R	5410189	5410266	pogo	2100	6	15	77	'6-9	68.02	5.0	2.5	intron	Orco -	chr3R_15_5410001	chr3R_5410001	0.40	RAL-810
333	chr3R	5691082	5691105	Doc	4360	4336	5	23	'3-2	63.64	2.9	1.3	intron,3` UTR	plx +,CG2104 -	chr3R_5_5690001	chr3R_5690001	0.60	RAL-810
334	chr3R	5925140	5925228	mdg1	7075	17	4	88	'2-2	71.00	4.6	0.7	intron	CG34113 -	chr3R_4_5925001	chr3R_5925001	0.50	RAL-810
335	chr3R	6051384	6051445	mdg1	2	7442	18	61	'12-6	66.87	5.0	3.0	intergenic	not near genes	chr3R_18_6050001	chr3R_6050001	0.67	RAL-810
336	chr3R	6061539	6061601	Tirant	399	20	7	62	'3-4	63.64	2.6	1.9	intergenic	not near genes	chr3R_7_6060001	chr3R_6060001	0.43	RAL-810
337	chr3R	6521560	6521611	FB	15	6	5	51	'3-2	61.55	2.0	1.7	intergenic	not near genes	chr3R_5_6520001	chr3R_6520001	0.60	RAL-810
338	chr3R	6600136	6600213	mdg1	7457	7040	13	77	'7-6	65.03	4.8	2.2	intergenic	not near genes	chr3R_13_6600001	chr3R_6600001	0.54	RAL-810
339	chr3R	7006279	7006341	mdg1	404	7037	19	62	'8-11	63.59	2.6	5.3	intergenic	not near genes	chr3R_19_7005001	chr3R_7005001	0.42	RAL-810
340	chr3R	7267175	7267257	copia	257	4869	16	82	'9-7	66.75	4.3	3.0	intron	Syt4 +	chr3R_16_7265001	chr3R_7265001	0.56	RAL-810
341	chr3R	7491771	7491842	invader6	4859	4497	13	71	'4-9	65.24	4.8	2.2	intron	alpha-Est10 -	chr3R_13_7490001	chr3R_7490001	0.31	RAL-810
342	chr3R	7492407	7492479	1360	3384	1	17	72	'9-8	67.79	5.8	2.5	intron	alpha-Est10 -	chr3R_17_7490001	chr3R_7490001	0.53	RAL-810
343	chr3R	8200115	8200134	Ivk	5354	5374	10	19	'6-4	61.54	5.0	1.7	intergenic	not near genes	chr3R_10_8200001	chr3R_8200001	0.60	RAL-810
344	chr3R	8596346	8596418	diver	5888	216	23	72	'15-8	64.89	4.7	4.0	intron	5-HT2B +	chr3R_23_8595001	chr3R_8595001	0.65	RAL-810
345	chr3R	8743122	8743198	roo	402	8662	24	76	'12-12	66.04	5.0	4.0	intron	CG9801 -	chr3R_24_8740001	chr3R_8740001	0.50	RAL-810
346	chr3R	8811169	8811234	1360	2	3378	15	65	'9-6	71.11	5.6	2.3	intron	CG9837 -	chr3R_15_8810001	chr3R_8810001	0.60	RAL-810
347	chr3R	8846324	8846374	P-element	2883	24	12	50	'6-6	44.91	3.9	2.4	intron	pyd -	chr3R_12_8845001	chr3R_8845001	0.50	RAL-810
348	chr3R	9143418	9143502	mdg3	250	5252	14	84	'8-6	67.08	3.5	3.1	intron	pum -	chr3R_14_9140001	chr3R_9140001	0.57	RAL-810
349	chr3R	9165486	9165572	copia	4867	259	18	86	'11-7	65.39	3.9	3.7	intron	pum -	chr3R_18_9165001	chr3R_9165001	0.61	RAL-810
350	chr3R	9211282	9211353	opus	1	489	15	71	'5-10	64.41	4.5	2.7	intron	pum -	chr3R_15_9210001	chr3R_9210001	0.33	RAL-810
351	chr3R	9221295	9221312	Doc	27	10	6	17	'4-2	55.11	6.4	0.8	intron	pum -	chr3R_6_9220001	chr3R_9220001	0.67	RAL-810
352	chr3R	10356634	10356713	pogo	1	2097	18	79	'8-10	70.59	4.7	3.2	intron	jumu +	chr3R_18_10355001	chr3R_10355001	0.44	RAL-810
353	chr3R	10358060	10358090	Juan	4052	4022	6	30	'3-3	67.78	5.7	0.9	intron	jumu +	chr3R_6_10355001	chr3R_10355001	0.50	RAL-810
354	chr3R	10436633	10436719	opus	499	7113	13	86	'7-6	69.68	2.8	3.4	exon	Cyp12e1 +	chr3R_13_10435001	chr3R_10435001	0.54	RAL-810
355	chr3R	10534153	10534237	roo	8663	411	18	84	'8-10	67.28	3.5	4.0	intron	hth -	chr3R_18_10530001	chr3R_10530001	0.44	RAL-810
356	chr3R	10660268	10660292	Doc	32	9	9	24	'6-3	60.35	6.7	1.2	intergenic	not near genes	chr3R_9_10660001	chr3R_10660001	0.67	RAL-810
357	chr3R	10741099	10741117	1360	3379	3364	6	18	'2-4	68.11	7.0	0.8	intron	TkR86C -	chr3R_6_10740001	chr3R_10740001	0.33	RAL-810
358	chr3R	11002092	11002160	flea	5004	4760	19	68	'10-9	66.51	4.0	3.8	intron	CG34114 +	chr3R_19_11000001	chr3R_11000001	0.53	RAL-810
359	chr3R	11416223	11416287	diver	226	5902	13	64	'6-7	67.67	6.0	1.9	3` UTR	CG6723 -	chr3R_13_11415001	chr3R_11415001	0.46	RAL-810
360	chr3R	11526888	11526954	Idefix	7381	3	4	66	'1-3	61.00	6.4	0.5	intergenic	not near genes	chr3R_4_11525001	chr3R_11525001	0.25	RAL-810
361	chr3R	11871701	11871771	roo	8670	408	13	70	'6-7	66.27	6.0	1.9	intergenic	not near genes	chr3R_13_11870001	chr3R_11870001	0.46	RAL-810
362	chr3R	11982783	11982855	1360	3384	3387	25	72	'11-14	63.24	3.6	5.4	intergenic	CG12224 -,CG3397 -	chr3R_25_11980001	chr3R_11980001	0.44	RAL-810
363	chr3R	12053586	12053660	mdg1	7039	415	20	74	'14-6	64.22	3.7	4.3	intergenic	not near genes	chr3R_20_12050001	chr3R_12050001	0.70	RAL-810
364	chr3R	12535230	12535256	Doc	33	7	4	26	'2-2	62.53	4.6	0.7	intron	Octbeta3R -	chr3R_4_12535001	chr3R_12535001	0.50	RAL-810
365	chr3R	12572569	12572604	jockey	36	7	9	35	'5-4	66.36	4.4	1.7	intron	Octbeta2R -	chr3R_9_12570001	chr3R_12570001	0.56	RAL-810
366	chr3R	12614269	12614285	Idefix	7386	7369	4	16	'2-2	65.21	6.2	0.6	intergenic	not near genes	chr3R_4_12610001	chr3R_12610001	0.50	RAL-810
367	chr3R	12780979	12781035	412	7070	488	17	56	'3-14	59.94	4.4	3.1	intron	beat-Vc -	chr3R_17_12780001	chr3R_12780001	0.18	RAL-810
368	chr3R	12829316	12829377	Ivk	5372	4	11	61	'6-5	62.91	2.5	3.1	intergenic	not near genes	chr3R_11_12825001	chr3R_12825001	0.55	RAL-810
369	chr3R	13110049	13110081	Doc	357	389	10	32	'3-7	65.40	4.9	1.7	intron	timeout +	chr3R_10_13110001	chr3R_13110001	0.30	RAL-810
370	chr3R	13149355	13149435	roo	408	8664	14	80	'4-10	64.88	5.0	2.3	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_14_13145001	chr3R_13145001	0.29	RAL-810
371	chr3R	13185421	13185493	roo	8671	408	11	72	'6-5	69.48	3.8	2.3	intergenic	CG8508 -	chr3R_11_13185001	chr3R_13185001	0.55	RAL-810
372	chr3R	13353328	13353391	looper1	259	257	4	63	'1-3	41.50	1.6	1.5	intergenic	mthl12 +	chr3R_4_13350001	chr3R_13350001	0.25	RAL-810
373	chr3R	13360322	13360339	jockey	31	20	6	17	'2-4	57.36	6.8	0.8	intergenic	not near genes	chr3R_6_13360001	chr3R_13360001	0.33	RAL-810
374	chr3R	13543924	13543945	1360	3364	3384	4	21	'1-3	63.22	3.1	1.0	intergenic	CG31337 -	chr3R_4_13540001	chr3R_13540001	0.25	RAL-810
375	chr3R	13545021	13545049	Burdock	6134	26	8	28	'6-2	67.78	6.5	1.1	intron	CG31337 -	chr3R_8_13545001	chr3R_13545001	0.75	RAL-810
376	chr3R	13580798	13580818	hopper	1409	1389	7	20	'4-3	59.20	5.2	1.1	intergenic	not near genes	chr3R_7_13580001	chr3R_13580001	0.57	RAL-810
377	chr3R	14049345	14049416	transib2	3	2818	15	71	'9-6	65.93	5.6	2.3	intergenic	not near genes	chr3R_15_14045001	chr3R_14045001	0.60	RAL-810
378	chr3R	14062857	14062912	copia	13	243	10	55	'3-7	58.67	3.3	2.3	intron	foxo +	chr3R_10_14060001	chr3R_14060001	0.30	RAL-810
379	chr3R	14085744	14085820	blood	377	7014	18	76	'12-6	64.47	3.8	3.8	intron	foxo +	chr3R_18_14085001	chr3R_14085001	0.67	RAL-810
380	chr3R	14172806	14172879	roo	4	405	18	73	'8-10	65.84	2.7	4.9	3` UTR	Dop1R1 -	chr3R_18_14170001	chr3R_14170001	0.44	RAL-810
381	chr3R	14244436	14244455	flea	20	4759	4	19	'2-2	65.45	1.8	1.4	intron	CG43291 -	chr3R_4_14240001	chr3R_14240001	0.50	RAL-810
382	chr3R	14254869	14254953	flea	4754	255	23	84	'12-11	65.40	2.9	5.9	intron	Aats-met -	chr3R_23_14250001	chr3R_14250001	0.52	RAL-810
383	chr3R	14435096	14435157	roo	1	390	9	61	'5-4	68.23	4.1	1.8	intron	cv-c -	chr3R_9_14435001	chr3R_14435001	0.56	RAL-810
384	chr3R	14630134	14630222	roo	415	8663	19	88	'13-6	66.85	3.1	4.6	intron	CG7886 -	chr3R_19_14630001	chr3R_14630001	0.68	RAL-810
385	chr3R	14723893	14723920	Tirant	8481	401	6	27	'5-1	65.94	4.5	1.1	5` UTR	kibra -	chr3R_6_14720001	chr3R_14720001	0.83	RAL-810
386	chr3R	14762532	14762613	roo	411	2	16	81	'8-8	66.91	4.6	2.9	intron	jvl +	chr3R_16_14760001	chr3R_14760001	0.50	RAL-810
387	chr3R	14863557	14863638	roo	411	8665	15	81	'5-10	60.20	4.0	3.0	intron	btsz -	chr3R_15_14860001	chr3R_14860001	0.33	RAL-810
388	chr3R	14873427	14873493	P-element	2880	5	18	66	'7-11	49.16	2.7	4.9	intron	btsz -	chr3R_18_14870001	chr3R_14870001	0.39	RAL-810
389	chr3R	15013509	15013576	roo	8672	404	16	67	'4-12	69.32	3.5	3.6	intergenic	not near genes	chr3R_16_15010001	chr3R_15010001	0.25	RAL-810
390	chr3R	15374533	15374556	P-element	2884	26	7	23	'2-5	49.06	6.2	1.0	intergenic	Rbp +,Ccm3 +	chr3R_7_15370001	chr3R_15370001	0.29	RAL-810
391	chr3R	15524400	15524477	pogo	1	2095	8	77	'1-7	65.83	3.8	1.7	intergenic	not near genes	chr3R_8_15520001	chr3R_15520001	0.12	RAL-810
392	chr3R	15525713	15525772	mdg1	7038	400	16	59	'7-9	66.70	5.5	2.5	intergenic	not near genes	chr3R_16_15525001	chr3R_15525001	0.44	RAL-810
393	chr3R	15568358	15568434	blood	8	381	12	76	'9-3	67.14	4.5	2.2	intergenic	not near genes	chr3R_12_15565001	chr3R_15565001	0.75	RAL-810
394	chr3R	15697034	15697116	3S18	5767	343	14	82	'6-8	67.16	3.7	3.0	3` UTR	CG5399 +	chr3R_14_15695001	chr3R_15695001	0.43	RAL-810
395	chr3R	15946031	15946059	F-element	14	41	6	28	'5-1	62.89	7.1	0.7	intron	Sap47 +	chr3R_6_15945001	chr3R_15945001	0.83	RAL-810
396	chr3R	16953609	16953679	Juan	157	4207	17	70	'9-8	62.42	3.5	3.8	intron	Abd-B -	chr3R_17_16950001	chr3R_16950001	0.53	RAL-810
397	chr3R	17642312	17642391	mdg1	420	7038	19	79	'12-7	66.17	5.3	3.0	intron	CG43175 +	chr3R_19_17640001	chr3R_17640001	0.63	RAL-810
398	chr3R	17733255	17733338	INE-1	565	562	11	83	'8-3	72.05	1.7	4.1	intergenic	Lgr1 +,CG14321 +	chr3R_11_17730001	chr3R_17730001	0.73	RAL-810
399	chr3R	17823644	17823710	mdg1	407	7039	15	66	'6-9	64.70	2.9	3.8	intron	tinc +	chr3R_15_17820001	chr3R_17820001	0.40	RAL-810
400	chr3R	17840053	17840071	blood	33	7026	7	18	'4-3	68.76	7.3	0.8	intron	tinc +	chr3R_7_17840001	chr3R_17840001	0.57	RAL-810
401	chr3R	17992040	17992114	Quasimodo	7364	5	6	74	'1-5	68.10	5.9	0.9	intron	cpo +	chr3R_6_17990001	chr3R_17990001	0.17	RAL-810
402	chr3R	18073069	18073215	mdg1	7040	7343	15	146	'13-2	62.61	3.0	3.8	intergenic	not near genes	chr3R_15_18070001	chr3R_18070001	0.87	RAL-810
403	chr3R	18105328	18105405	roo	410	8669	19	77	'8-11	63.87	2.7	5.1	intron	sr +	chr3R_19_18105001	chr3R_18105001	0.42	RAL-810
404	chr3R	18455784	18455852	412	12	7545	15	68	'5-10	63.88	1.2	6.8	intron	fru -	chr3R_15_18455001	chr3R_18455001	0.33	RAL-810
405	chr3R	18467821	18467892	3S18	5767	6099	17	71	'13-4	61.62	3.8	3.5	intron	fru -	chr3R_17_18465001	chr3R_18465001	0.76	RAL-810
406	chr3R	18809738	18809807	Tabor	7317	5	14	69	'9-5	61.24	4.2	2.7	intron	CG18208 -	chr3R_14_18805001	chr3R_18805001	0.64	RAL-810
407	chr3R	18831141	18831199	mdg3	5250	5474	10	58	'4-6	66.10	4.8	1.7	intron	CG18208 -	chr3R_10_18830001	chr3R_18830001	0.40	RAL-810
408	chr3R	18917828	18917853	S2	1682	1707	7	25	'5-2	78.29	2.8	1.8	intron	Xrp1 +	chr3R_7_18915001	chr3R_18915001	0.71	RAL-810
409	chr3R	19009670	19009751	blood	378	7012	18	81	'8-10	61.19	2.2	5.6	intron	gukh +	chr3R_18_19005001	chr3R_19005001	0.44	RAL-810
410	chr3R	19132114	19132190	roo	8662	401	22	76	'11-11	65.47	5.5	3.4	intergenic	CG6040 +	chr3R_22_19130001	chr3R_19130001	0.50	RAL-810
411	chr3R	19183482	19183556	mdg3	5251	238	20	74	'10-10	60.70	4.8	3.4	intron	CG31475 +	chr3R_20_19180001	chr3R_19180001	0.50	RAL-810
412	chr3R	19185007	19185078	hopper	3	1408	18	71	'13-5	64.22	4.5	3.3	intron	CG31475 +	chr3R_18_19185001	chr3R_19185001	0.72	RAL-810
413	chr3R	19390465	19390547	HMS-Beagle	248	6797	18	82	'11-7	66.52	2.6	5.0	intron,exon	Ino80 -,CG18493 +	chr3R_18_19390001	chr3R_19390001	0.61	RAL-810
414	chr3R	19643199	19643272	Max-element	2	8530	16	73	'12-4	61.66	3.0	4.0	3` UTR	Vha13 -	chr3R_16_19640001	chr3R_19640001	0.75	RAL-810
415	chr3R	20151383	20151464	copia	255	4868	17	81	'11-6	70.51	11.8	1.3	intergenic	not near genes	chr3R_17_20150001	chr3R_20150001	0.65	RAL-810
416	chr3R	20239604	20239690	flea	257	4754	20	86	'12-8	66.79	4.7	3.5	intron	Nlg4 +	chr3R_20_20235001	chr3R_20235001	0.60	RAL-810
417	chr3R	20376498	20376560	FB	5	10	10	62	'9-1	59.97	2.8	2.6	intergenic	not near genes	chr3R_10_20375001	chr3R_20375001	0.90	RAL-810
418	chr3R	20427379	20427396	BS	5069	5085	6	17	'4-2	63.72	4.1	1.2	intron	Gfrl -	chr3R_6_20425001	chr3R_20425001	0.67	RAL-810
419	chr3R	21297830	21297889	P-element	2883	15	11	59	'5-6	44.99	6.8	1.4	5` UTR	Hsromega +	chr3R_11_21295001	chr3R_21295001	0.45	RAL-810
420	chr3R	21689556	21689628	roo	8662	9060	12	72	'8-4	63.37	3.0	3.0	intron	CG31176 -	chr3R_12_21685001	chr3R_21685001	0.67	RAL-810
421	chr3R	22220054	22220135	mdg1	421	7038	17	81	'8-9	64.63	3.8	3.5	intron	SKIP +	chr3R_17_22220001	chr3R_22220001	0.47	RAL-810
422	chr3R	22753253	22753298	copia	4991	4870	18	45	'7-11	62.00	5.7	2.7	intron,intron	CG7029 +,Usp12-46 +	chr3R_18_22750001	chr3R_22750001	0.39	RAL-810
423	chr3R	22842991	22843057	hobo	2932	4	7	66	'3-4	61.39	2.0	2.3	intergenic	not near genes	chr3R_7_22840001	chr3R_22840001	0.43	RAL-810
424	chr3R	23724097	23724180	Transpac	310	4918	23	83	'11-12	65.62	5.5	3.5	intron	CG10365 +	chr3R_23_23720001	chr3R_23720001	0.48	RAL-810
425	chr3R	24002631	24002656	roo	9045	407	8	25	'4-4	64.33	7.8	0.9	intron	KrT95D -	chr3R_8_24000001	chr3R_24000001	0.50	RAL-810
426	chr3R	24073798	24073861	Stalker4	5	397	8	63	'2-6	63.50	3.3	1.9	intron	4EHP -	chr3R_8_24070001	chr3R_24070001	0.25	RAL-810
427	chr3R	24096444	24096514	mdg3	5263	246	10	70	'3-7	65.78	6.0	1.4	intron	4EHP -	chr3R_10_24095001	chr3R_24095001	0.30	RAL-810
428	chr3R	24811631	24811686	FB	9	13	13	55	'5-8	60.65	4.4	2.4	intron	CG5807 -	chr3R_13_24810001	chr3R_24810001	0.38	RAL-810
429	chr3R	25316252	25316334	297	6581	393	5	82	'4-1	66.87	2.1	1.6	intergenic	CG10559 -,CG10553 -	chr3R_5_25315001	chr3R_25315001	0.80	RAL-810
430	chr3R	25458583	25458602	Doc	6	25	5	19	'4-1	70.67	8.2	0.5	intron	Fur1 -	chr3R_5_25455001	chr3R_25455001	0.80	RAL-810
431	chr3R	25515663	25515723	P-element	2886	2870	10	60	'4-6	47.13	3.6	2.2	intergenic	msi +	chr3R_10_25515001	chr3R_25515001	0.40	RAL-810
432	chr3R	25523803	25523827	F-element	14	36	7	24	'4-3	59.61	5.7	1.0	intron	msi +	chr3R_7_25520001	chr3R_25520001	0.57	RAL-810
433	chr3R	25855645	25855752	mdg1	38	28	4	107	'1-3	64.66	2.3	1.2	intergenic	not near genes	chr3R_4_25855001	chr3R_25855001	0.25	RAL-810
434	chr3R	25877186	25877254	Quasimodo	6	7360	5	68	'3-2	66.47	5.8	0.7	intron	Tsp96F -	chr3R_5_25875001	chr3R_25875001	0.60	RAL-810
435	chr3R	26017509	26017581	P-element	2884	2884	12	72	'6-6	46.55	3.9	2.4	intergenic	E(spl)m2-BFM -	chr3R_12_26015001	chr3R_26015001	0.50	RAL-810
436	chr3R	26023101	26023146	BS	5077	5014	16	45	'7-9	63.19	5.3	2.5	3` UTR	E(spl)m3-HLH +	chr3R_16_26020001	chr3R_26020001	0.44	RAL-810
437	chr3R	26263591	26263664	roo	401	8664	12	73	'6-6	64.36	3.0	3.0	intron	CG6154 +	chr3R_12_26260001	chr3R_26260001	0.50	RAL-810
438	chr3R	26769982	26770056	mdg1	7045	421	9	74	'6-3	62.86	3.7	1.9	intergenic	CR45563 +	chr3R_9_26765001	chr3R_26765001	0.67	RAL-810
439	chr3R	26828730	26828802	Burdock	246	1	14	72	'5-9	67.31	4.3	2.6	intron	Tl +	chr3R_14_26825001	chr3R_26825001	0.36	RAL-810
440	chr3R	26892655	26892738	roo	410	8662	13	83	'6-7	67.64	3.3	3.0	intron	T48 +	chr3R_13_26890001	chr3R_26890001	0.46	RAL-810
441	chr3R	26968385	26968448	FB	7	5	9	63	'6-3	61.27	4.0	1.8	intron	CG5521 +	chr3R_9_26965001	chr3R_26965001	0.67	RAL-810
442	chr3R	27301553	27301628	pogo	2095	3	14	75	'7-7	65.57	4.4	2.6	intron	CG3339 -	chr3R_14_27300001	chr3R_27300001	0.50	RAL-810
443	chr3R	27501697	27501774	297	394	6586	10	77	'7-3	66.45	4.0	2.0	exon	CG43139 -	chr3R_10_27500001	chr3R_27500001	0.70	RAL-810
444	chr3R	27896919	27896998	pogo	5	2097	15	79	'9-6	57.93	4.0	3.0	intron	CG34353 -	chr3R_15_27895001	chr3R_27895001	0.60	RAL-810
445	chr3R	27910453	27910508	I-element	5339	4	4	55	'1-3	61.00	4.2	0.8	intergenic	not near genes	chr3R_4_27910001	chr3R_27910001	0.25	RAL-810
446	chr3R	27966497	27966557	Juan	4206	4028	14	60	'6-8	65.01	3.1	3.4	intron	CG4849 +	chr3R_14_27965001	chr3R_27965001	0.43	RAL-810
447	chr3R	27992473	27992550	mdg1	7458	7040	19	77	'11-8	67.95	2.5	5.4	intergenic	not near genes	chr3R_19_27990001	chr3R_27990001	0.58	RAL-810
448	chr3R	28365078	28365146	412	7539	6	7	68	'4-3	60.81	3.8	1.5	intergenic	not near genes	chr3R_7_28365001	chr3R_28365001	0.57	RAL-810
449	chr3R	28489066	28489145	roo	406	8663	19	79	'7-12	70.48	5.3	3.0	intron	Dhc98D +	chr3R_19_28485001	chr3R_28485001	0.37	RAL-810
450	chr3R	28800473	28800550	copia	4869	252	17	77	'13-4	66.32	4.5	3.1	intergenic	not near genes	chr3R_17_28800001	chr3R_28800001	0.76	RAL-810
451	chr3R	29075843	29075928	roo	413	8664	19	85	'9-10	70.36	4.0	3.8	intron	CG11873 +	chr3R_19_29075001	chr3R_29075001	0.47	RAL-810
452	chr3R	29240288	29240370	roo	408	8663	17	82	'11-6	64.90	3.3	4.0	intron	CG31427 -	chr3R_17_29240001	chr3R_29240001	0.65	RAL-810
453	chr3R	29388983	29389054	McClintock	475	7	8	71	'4-4	66.28	4.5	1.5	intron	Ptp99A +	chr3R_8_29385001	chr3R_29385001	0.50	RAL-810
454	chr3R	29952701	29952779	invader4	6	322	9	78	'2-7	65.73	2.2	2.8	intron	TkR99D -	chr3R_9_29950001	chr3R_29950001	0.22	RAL-810
455	chr3R	30065094	30065165	flea	4754	5001	14	71	'9-5	67.87	4.1	2.7	intron	sima +	chr3R_14_30065001	chr3R_30065001	0.64	RAL-810
456	chr3R	30079065	30079125	roo	9053	8666	8	60	'2-6	69.08	3.3	1.9	intron	sima +	chr3R_8_30075001	chr3R_30075001	0.25	RAL-810
457	chr3R	30516936	30517014	roo	8668	409	13	78	'2-11	65.85	2.4	3.8	intergenic	CG9698 +,jdp -	chr3R_13_30515001	chr3R_30515001	0.15	RAL-810
458	chr3R	30571648	30571733	Burdock	256	6134	18	85	'10-8	67.01	5.0	3.0	intron	tmod +	chr3R_18_30570001	chr3R_30570001	0.56	RAL-810
459	chr3R	30958463	30958543	Max-element	8387	295	15	80	'11-4	59.83	3.3	3.5	intergenic	not near genes	chr3R_15_30955001	chr3R_30955001	0.73	RAL-810
460	chr3R	31196686	31196725	jockey	4979	10	5	39	'2-3	59.73	6.0	0.7	intergenic	CG1544 +	chr3R_5_31195001	chr3R_31195001	0.40	RAL-810
461	chr3R	31566959	31567027	pogo	13	2100	7	68	'3-4	61.10	1.2	3.2	intergenic	not near genes	chr3R_7_31565001	chr3R_31565001	0.43	RAL-810
462	chr3R	31605455	31605526	Tirant	8112	403	10	71	'4-6	70.03	4.0	2.0	intron	CycG -	chr3R_10_31605001	chr3R_31605001	0.40	RAL-810
463	chr3R	31815928	31816010	gypsy	460	6985	24	82	'11-13	67.31	3.6	5.2	intron	RhoGAP100F +	chr3R_24_31815001	chr3R_31815001	0.46	RAL-810
464	chr4	903940	904014	P-element	2886	3	18	74	'10-8	54.66	4.3	3.4	intron	unc-13 -	chr4_18_900001	chr4_900001	0.56	RAL-810
465	chr4	1038446	1038526	pogo	2098	1	17	80	'9-8	68.48	4.2	3.3	exon	CaMKII -	chr4_17_1035001	chr4_1035001	0.53	RAL-810
466	chr4	1294980	1294995	TAHRE	10416	10411	9	15	'1-8	70.84	0.0	9.0	intergenic	not near genes	chr4_9_1290001	chr4_1290001	0.11	RAL-810
467	chrX	265935	265969	jockey	4665	4699	7	34	'1-6	66.08	4.7	1.2	intron,3` UTR	CR43906 +,CG13376 -	chrX_7_265001	chrX_265001	0.14	RAL-810
468	chrX	292416	292449	G3	4358	4325	11	33	'4-7	61.93	5.6	1.7	intron,intron	CG3777 +,CG13375 -	chrX_11_290001	chrX_290001	0.36	RAL-810
469	chrX	689195	689261	hopper	1406	1411	9	66	'3-6	66.12	3.7	1.9	intron	sdk +	chrX_9_685001	chrX_685001	0.33	RAL-810
470	chrX	1000148	1000220	Tabor	4	480	12	72	'5-7	59.84	3.3	2.8	intergenic	not near genes	chrX_12_1000001	chrX_1000001	0.42	RAL-810
471	chrX	1087534	1087604	roo	8664	398	10	70	'8-2	65.20	2.3	3.0	5` UTR,intron	CR44779 +,CG3655 -	chrX_10_1085001	chrX_1085001	0.80	RAL-810
472	chrX	1656500	1656557	1360	3387	3369	9	57	'5-4	69.67	3.4	2.0	intron	Mur2B -	chrX_9_1655001	chrX_1655001	0.56	RAL-810
473	chrX	2083172	2083218	Tabor	7296	2	10	46	'4-6	63.27	4.6	1.8	intron	Unc-76 +	chrX_10_2080001	chrX_2080001	0.40	RAL-810
474	chrX	2476340	2476422	HMS-Beagle	6795	245	17	82	'9-8	66.35	3.1	4.1	intron	trol -	chrX_17_2475001	chrX_2475001	0.53	RAL-810
475	chrX	2525603	2525676	roo	406	5	15	73	'9-6	65.88	5.5	2.3	intron	trol -	chrX_15_2525001	chrX_2525001	0.60	RAL-810
476	chrX	2553089	2553166	Transpac	4919	310	9	77	'5-4	72.12	2.5	2.6	intron	Pdfr +	chrX_9_2550001	chrX_2550001	0.56	RAL-810
477	chrX	2668555	2668616	Tabor	6853	486	6	61	'3-3	58.49	2.9	1.5	intron	sgg +	chrX_6_2665001	chrX_2665001	0.50	RAL-810
478	chrX	2858430	2858505	roo	8663	402	12	75	'8-4	70.78	3.1	2.9	intron	kirre +	chrX_12_2855001	chrX_2855001	0.67	RAL-810
479	chrX	2863532	2863603	roo	402	2	9	71	'4-5	60.30	2.4	2.6	intron	kirre +	chrX_9_2860001	chrX_2860001	0.44	RAL-810
480	chrX	2961132	2961205	3S18	5771	340	11	73	'5-6	61.80	4.4	2.0	intron,intron	kirre +,rst -	chrX_11_2960001	chrX_2960001	0.45	RAL-810
481	chrX	3274872	3274943	roo	8663	9061	13	71	'9-4	66.61	4.3	2.5	intron	dnc +	chrX_13_3270001	chrX_3270001	0.69	RAL-810
482	chrX	3841638	3841659	jockey	11	31	5	21	'3-2	63.27	7.5	0.6	intron	ec +	chrX_5_3840001	chrX_3840001	0.60	RAL-810
483	chrX	4216068	4216087	hopper	5	1391	6	19	'3-3	64.81	5.4	0.9	intergenic	not near genes	chrX_6_4215001	chrX_4215001	0.50	RAL-810
484	chrX	4267275	4267300	297	6951	395	4	25	'2-2	71.20	2.2	1.2	intergenic	not near genes	chrX_4_4265001	chrX_4265001	0.50	RAL-810
485	chrX	4297420	4297499	rover	6953	345	14	79	'8-6	69.53	3.2	3.3	intergenic	not near genes	chrX_14_4295001	chrX_4295001	0.57	RAL-810
486	chrX	5018720	5018774	Juan	4199	4027	10	54	'6-4	61.88	2.3	3.0	intron	CR44833 -	chrX_10_5015001	chrX_5015001	0.60	RAL-810
487	chrX	5366154	5366219	blood	7010	7372	15	65	'10-5	67.74	2.2	4.7	intron	SK +	chrX_15_5365001	chrX_5365001	0.67	RAL-810
488	chrX	6082533	6082611	diver	225	5891	21	78	'9-12	61.99	3.7	4.5	intergenic	raptor -,Mipp2 -	chrX_21_6080001	chrX_6080001	0.43	RAL-810
489	chrX	6217348	6217378	roo	407	9041	9	30	'6-3	62.78	5.7	1.3	3` UTR	Btd -	chrX_9_6215001	chrX_6215001	0.67	RAL-810
490	chrX	6410016	6410085	roo	10	406	8	69	'4-4	61.76	3.6	1.7	intergenic	not near genes	chrX_8_6410001	chrX_6410001	0.50	RAL-810
491	chrX	6644250	6644328	Tabor	4	484	12	78	'9-3	48.60	1.9	4.1	intron	pigs +	chrX_12_6640001	chrX_6640001	0.75	RAL-810
492	chrX	6746314	6746391	roo	8668	409	14	77	'8-6	65.57	4.5	2.5	5` UTR	CR44895 +	chrX_14_6745001	chrX_6745001	0.57	RAL-810
493	chrX	6755734	6755754	transib4	156	176	8	20	'5-3	78.26	8.0	0.9	3` UTR	CG14439 +	chrX_8_6755001	chrX_6755001	0.62	RAL-810
494	chrX	7838051	7838127	pogo	2099	6	8	76	'5-3	67.81	2.7	2.2	intron	CG1402 +	chrX_8_7835001	chrX_7835001	0.62	RAL-810
495	chrX	8090712	8090732	jockey	4766	4786	9	20	'5-4	64.29	5.6	1.4	intron	Ubc-E2H -	chrX_9_8090001	chrX_8090001	0.56	RAL-810
496	chrX	8192359	8192394	jockey	4666	4701	7	35	'2-5	66.80	5.2	1.1	intron	sdt +	chrX_7_8190001	chrX_8190001	0.29	RAL-810
497	chrX	8203808	8203877	Tabor	485	12	11	69	'7-4	60.99	3.4	2.5	intron	sdt +	chrX_11_8200001	chrX_8200001	0.64	RAL-810
498	chrX	8272617	8272695	Burdock	6135	6386	20	78	'12-8	70.05	3.6	4.3	exon	CG15343 -	chrX_20_8270001	chrX_8270001	0.60	RAL-810
499	chrX	8696440	8696504	hopper	1409	11	9	64	'3-6	62.30	3.1	2.2	intergenic	not near genes	chrX_9_8695001	chrX_8695001	0.33	RAL-810
500	chrX	8913783	8913805	roo	9047	406	9	22	'7-2	61.63	1.7	3.3	intron	rdgA +	chrX_9_8910001	chrX_8910001	0.78	RAL-810
501	chrX	9034339	9034424	roo	8662	411	13	85	'7-6	69.85	3.3	3.0	intron,intron	CR43836 -,CG42388 +	chrX_13_9030001	chrX_9030001	0.54	RAL-810
502	chrX	9217489	9217570	412	2	496	17	81	'6-11	63.22	3.0	4.2	intergenic	CG15369 +,t -	chrX_17_9215001	chrX_9215001	0.35	RAL-810
503	chrX	9342623	9342653	FB	1	31	5	30	'2-3	65.62	4.8	0.9	intron	CG34449 -	chrX_5_9340001	chrX_9340001	0.40	RAL-810
504	chrX	9727557	9727611	hopper	21	1413	6	54	'2-4	65.43	2.3	1.8	intergenic	CR43498 -	chrX_6_9725001	chrX_9725001	0.33	RAL-810
505	chrX	9816279	9816322	BS	4	5079	10	43	'5-5	65.95	2.7	2.7	intron	CG32698 +	chrX_10_9815001	chrX_9815001	0.50	RAL-810
506	chrX	10130514	10130581	roo	8668	399	9	67	'3-6	67.79	3.2	2.1	intron,intron	RhoU +,CR44894 -	chrX_9_10130001	chrX_10130001	0.33	RAL-810
507	chrX	10199887	10199963	roo	8662	403	15	76	'7-8	65.87	3.9	3.1	intron	CR44894 -	chrX_15_10195001	chrX_10195001	0.47	RAL-810
508	chrX	10547531	10547559	Juan	4048	4080	8	28	'4-4	61.52	4.1	1.6	intron	spri -	chrX_8_10545001	chrX_10545001	0.50	RAL-810
509	chrX	10757834	10757864	jockey	4960	4990	9	30	'4-5	64.34	5.1	1.5	intergenic	Rph -	chrX_9_10755001	chrX_10755001	0.44	RAL-810
510	chrX	10824061	10824079	jockey	4694	4676	9	18	'4-5	56.07	7.7	1.0	intergenic	CR45624 +	chrX_9_10820001	chrX_10820001	0.44	RAL-810
511	chrX	11028112	11028192	Stalker2	402	7248	12	80	'7-5	55.00	2.5	3.4	intron	CG42339 -	chrX_12_11025001	chrX_11025001	0.58	RAL-810
512	chrX	11226171	11226245	roo	402	8664	13	74	'6-7	62.02	3.2	3.1	intron	CG44422 -	chrX_13_11225001	chrX_11225001	0.46	RAL-810
513	chrX	12003927	12003986	P-element	3	2872	14	59	'8-6	40.35	3.1	3.4	intergenic	fw -	chrX_14_12000001	chrX_12000001	0.57	RAL-810
514	chrX	12092477	12092561	HMS-Beagle2	6884	7198	9	84	'4-5	69.44	3.4	2.0	intron,intron	CR43960 +,Ten-a +	chrX_9_12090001	chrX_12090001	0.44	RAL-810
515	chrX	12733624	12733704	S-element	1714	2	10	80	'5-5	66.67	3.8	2.1	intron	Smr -	chrX_10_12730001	chrX_12730001	0.50	RAL-810
516	chrX	13042302	13042344	jockey	4671	4984	5	42	'4-1	62.86	0.7	2.9	intron	rad +	chrX_5_13040001	chrX_13040001	0.80	RAL-810
517	chrX	14062784	14062860	pogo	2100	7	14	76	'4-10	64.08	2.0	4.7	intergenic	not near genes	chrX_14_14060001	chrX_14060001	0.29	RAL-810
518	chrX	14219389	14219474	S-element	1714	1	8	85	'3-5	65.20	3.6	1.7	intron	l(1)G0007 +	chrX_8_14215001	chrX_14215001	0.38	RAL-810
519	chrX	14303331	14303409	roo	8664	406	6	78	'3-3	67.78	4.5	1.1	intergenic	not near genes	chrX_6_14300001	chrX_14300001	0.50	RAL-810
520	chrX	14369473	14369517	hobo	7	2938	4	44	'2-2	66.08	2.7	1.1	intron	dpr8 +	chrX_4_14365001	chrX_14365001	0.50	RAL-810
521	chrX	14827590	14827612	G2	3022	3043	8	22	'4-4	62.62	5.0	1.3	3` UTR	CG14408 -	chrX_8_14825001	chrX_14825001	0.50	RAL-810
522	chrX	14962139	14962156	jockey	8	26	6	17	'3-3	60.18	6.0	0.9	intron	eag +	chrX_6_14960001	chrX_14960001	0.50	RAL-810
523	chrX	14962241	14962269	hopper	31	4	6	28	'4-2	64.85	0.3	4.6	intron	eag +	chrX_6_14960001	chrX_14960001	0.67	RAL-810
524	chrX	15171079	15171154	opus	113	491	11	75	'4-7	65.20	3.7	2.3	intergenic	not near genes	chrX_11_15170001	chrX_15170001	0.36	RAL-810
525	chrX	15320838	15320898	P-element	2872	2884	14	60	'7-7	49.05	5.2	2.3	intron	Top1 +	chrX_14_15320001	chrX_15320001	0.50	RAL-810
526	chrX	15570461	15570542	roo	8662	406	13	81	'5-8	65.15	4.8	2.2	3` UTR	CG15643 -	chrX_13_15570001	chrX_15570001	0.38	RAL-810
527	chrX	16750405	16750485	S-element	1714	1714	9	80	'5-4	69.63	2.8	2.4	intron	CG9634 -	chrX_9_16750001	chrX_16750001	0.56	RAL-810
528	chrX	16947594	16947616	1360	24	3387	11	22	'3-8	59.37	1.3	4.8	intron	RhoGAP15B +	chrX_11_16945001	chrX_16945001	0.27	RAL-810
529	chrX	17062146	17062227	297	395	6582	8	81	'5-3	69.03	3.0	2.0	intron	CG45002 -	chrX_8_17060001	chrX_17060001	0.62	RAL-810
530	chrX	17837966	17838046	S-element	3	1715	18	80	'7-11	64.11	4.5	3.3	intron	CG6398 +	chrX_18_17835001	chrX_17835001	0.39	RAL-810
531	chrX	18029455	18029510	I-element	5345	2	8	55	'4-4	64.83	2.5	2.3	intron	Sh -	chrX_8_18025001	chrX_18025001	0.50	RAL-810
532	chrX	18176354	18176386	jockey	4675	4684	10	32	'3-7	68.22	3.5	2.2	intergenic	not near genes	chrX_10_18175001	chrX_18175001	0.30	RAL-810
533	chrX	18239067	18239091	jockey	4562	4586	5	24	'2-3	61.30	5.1	0.8	intergenic	not near genes	chrX_5_18235001	chrX_18235001	0.40	RAL-810
534	chrX	19229396	19229415	roo	402	401	9	19	'4-5	57.23	4.3	1.7	intron	CG7884 +	chrX_9_19225001	chrX_19225001	0.44	RAL-810
535	chrX	19311091	19311164	297	8	394	5	73	'3-2	67.67	4.7	0.9	3` UTR	out -	chrX_5_19310001	chrX_19310001	0.60	RAL-810
536	chrX	19776124	19776172	Tabor	7295	4	13	48	'3-10	63.54	4.4	2.4	intron	vfl -	chrX_13_19775001	chrX_19775001	0.23	RAL-810
537	chrX	19794297	19794319	hobo	4	28	6	22	'4-2	64.03	4.0	1.2	intergenic	not near genes	chrX_6_19790001	chrX_19790001	0.67	RAL-810
538	chrX	19980496	19980564	Burdock	6135	6378	16	68	'11-5	68.83	3.0	4.0	intergenic	not near genes	chrX_16_19980001	chrX_19980001	0.69	RAL-810
539	chrX	20091154	20091229	roo	8662	401	16	75	'8-8	66.96	3.1	3.9	intergenic	fd19B -,CR45628 +	chrX_16_20090001	chrX_20090001	0.50	RAL-810
540	chrX	20129081	20129138	mdg1	3	402	8	57	'5-3	66.89	1.9	2.8	intergenic	not near genes	chrX_8_20125001	chrX_20125001	0.62	RAL-810
541	chrX	20138906	20138973	17.6	490	6940	11	67	'6-5	65.64	4.3	2.1	intergenic	CG15322 +	chrX_11_20135001	chrX_20135001	0.55	RAL-810
542	chrX	20286590	20286662	roo	408	8670	14	72	'6-8	66.77	3.5	3.1	intergenic	not near genes	chrX_14_20285001	chrX_20285001	0.43	RAL-810
543	chrX	20396870	20396894	Rt1b	5139	5118	8	24	'3-5	62.83	1.9	2.8	intron	HERC2 +	chrX_8_20395001	chrX_20395001	0.38	RAL-810
544	chrX	20419120	20419198	297	6972	6582	11	78	'7-4	70.42	4.0	2.2	intergenic	Obp19c -,Obp19d +	chrX_11_20415001	chrX_20415001	0.64	RAL-810
545	chrX	20856680	20856698	opus	480	498	7	18	'4-3	64.88	4.0	1.4	intron	shakB -	chrX_7_20855001	chrX_20855001	0.57	RAL-810
546	chrX	20989720	20989789	roo	8664	397	6	69	'3-3	63.78	2.6	1.7	intergenic	not near genes	chrX_6_20985001	chrX_20985001	0.50	RAL-810
547	chrX	20999526	20999573	BS	5083	4	12	47	'6-6	64.30	3.6	2.6	intergenic	not near genes	chrX_12_20995001	chrX_20995001	0.50	RAL-810
548	chrX	21087580	21087610	mdg3	5251	29	7	30	'2-5	66.93	1.7	2.6	intergenic	not near genes	chrX_7_21085001	chrX_21085001	0.29	RAL-810
549	chrX	21122835	21122910	Bari1	9	1707	15	75	'6-9	63.52	3.4	3.4	intergenic	not near genes	chrX_15_21120001	chrX_21120001	0.40	RAL-810
550	chrX	21322771	21322829	Juan	4204	4022	13	58	'6-7	64.69	4.4	2.4	intron	Dd -	chrX_13_21320001	chrX_21320001	0.46	RAL-810
551	chrX	22556533	22556596	Tabor	7316	10	10	63	'5-5	59.47	5.1	1.6	intergenic	not near genes	chrX_10_22555001	chrX_22555001	0.50	RAL-810
552	chrX	22689389	22689409	mariner2	49	28	8	20	'5-3	60.89	0.7	4.7	intron	CR44997 +	chrX_8_22685001	chrX_22685001	0.62	RAL-810
553	chrY	3271671	3271712	roo	8678	9046	8	41	'3-5	71.50	5.2	1.3	intergenic	not near genes	chrY_8_3270001	chrY_3270001	0.38	RAL-810
554	chrY	3648868	3649155	S-element	1705	1704	6	287	'5-1	61.95	0.5	4.0	intergenic	not near genes	chrY_6_3645001	chrY_3645001	0.83	RAL-810