SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47458 47485 chr2L 52563 52588 jockey 10 5105 2.5 4.5 3.5 2.2 5130 chr2L 47458 intron Cda5 - chr2L 50023 intron Cda5 - chr2L 52588 intron Cda5 - chr2L_10_50001 chr2L_50001 RAL-810 2 chr2L 325129 325148 chr2L 325206 325221 5 75 3.0 5.0 4.0 1.0 92 chr2L 325129 intron Plc21C + chr2L 325175 intron Plc21C + chr2L 325221 intron Plc21C + chr2L_5_325001 chr2L_325001 RAL-810 3 chr2L 347884 347919 chr2L 355384 355419 blood 10 7500 2.0 1.5 1.8 3.6 7535 chr2L 347884 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355419 3` UTR Plc21C + chr2L_10_350001 chr2L_350001 RAL-810 4 chr2L 489536 489555 chr2L 489618 489639 6 82 2.0 3.0 2.5 1.7 103 chr2L 489536 intron ush + chr2L 489588 intron ush + chr2L 489639 intron ush + chr2L_6_485001 chr2L_485001 RAL-810 5 chr2L 673793 673828 chr2L 675811 675846 9 2020 16.0 21.0 18.5 0.5 2053 chr2L 673793 intron ds - chr2L 674820 intron ds - chr2L 675846 intron ds - chr2L_9_670001 chr2L_670001 RAL-810 6 chr2L 680756 680757 chr2L 680904 680913 4 154 0.0 2.5 1.2 1.8 157 chr2L 680756 intron ds - chr2L 680834 intron ds - chr2L 680913 intron ds - chr2L_4_680001 chr2L_680001 RAL-810 7 chr2L 686917 686950 chr2L 695957 695983 roo 8 9039 2.5 3.0 2.8 2.1 9066 chr2L 686917 intron ds - chr2L 691450 intron ds - chr2L 695983 intron ds - chr2L_8_690001 chr2L_690001 RAL-810 8 chr2L 763594 763628 chr2L 763670 763704 10 74 1.5 0.5 1.0 5.0 110 chr2L 763594 intergenic not near genes chr2L 763649 intergenic not near genes chr2L 763704 intergenic not near genes chr2L_10_760001 chr2L_760001 RAL-810 9 chr2L 770472 770478 chr2L 772253 772259 Bari1 4 1780 3.0 4.5 3.8 0.8 1787 chr2L 770472 intergenic not near genes chr2L 771366 intergenic not near genes chr2L 772259 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-810 10 chr2L 770480 770485 chr2L 772250 772264 Bari1 4 1778 1.0 3.5 2.2 1.2 1784 chr2L 770480 intergenic not near genes chr2L 771372 intergenic not near genes chr2L 772264 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-810 11 chr2L 877849 877863 chr2L 877929 877944 5 81 3.5 2.0 2.8 1.3 95 chr2L 877849 3` UTR,exon CG15824 -,ninaA + chr2L 877896 3` UTR,intron CG15824 -,ninaA + chr2L 877944 3` UTR,intron CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-810 12 chr2L 964556 964571 chr2L 964640 964654 4 84 2.0 2.5 2.2 1.2 98 chr2L 964556 intergenic not near genes chr2L 964605 intergenic not near genes chr2L 964654 intergenic not near genes chr2L_4_960001 chr2L_960001 RAL-810 13 chr2L 1035566 1035588 chr2L 1035643 1035665 7 77 3.0 2.5 2.8 1.8 99 chr2L 1035566 intron IA-2 - chr2L 1035616 intron IA-2 - chr2L 1035665 intron IA-2 - chr2L_7_1035001 chr2L_1035001 RAL-810 14 chr2L 1042624 1042628 chr2L 1042701 1042704 6 77 7.0 0.0 3.5 1.3 80 chr2L 1042624 intron IA-2 - chr2L 1042664 intron IA-2 - chr2L 1042704 intron IA-2 - chr2L_6_1040001 chr2L_1040001 RAL-810 15 chr2L 1066095 1066125 chr2L 1066176 1066206 11 81 0.5 4.5 2.5 3.1 111 chr2L 1066095 intron S - chr2L 1066150 intron S - chr2L 1066206 intron S - chr2L_11_1065001 chr2L_1065001 RAL-810 16 chr2L 1126674 1126703 chr2L 1126748 1126779 9 73 2.5 3.0 2.8 2.4 105 chr2L 1126674 intron Pino - chr2L 1126726 intron Pino - chr2L 1126779 intron Pino - chr2L_9_1125001 chr2L_1125001 RAL-810 17 chr2L 1156858 1156867 chr2L 1156963 1156971 4 104 2.5 2.0 2.2 1.2 113 chr2L 1156858 intron capt - chr2L 1156914 intron capt - chr2L 1156971 intron capt - chr2L_4_1155001 chr2L_1155001 RAL-810 18 chr2L 1188574 1188600 chr2L 1188737 1188761 8 162 1.5 3.5 2.5 2.3 187 chr2L 1188574 intron CG5001 + chr2L 1188668 intron CG5001 + chr2L 1188761 intron CG5001 + chr2L_8_1185001 chr2L_1185001 RAL-810 19 chr2L 1220130 1220161 chr2L 1227596 1227627 blood 9 7465 2.5 0.5 1.5 3.6 7497 chr2L 1220130 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227627 intron CG42329 + chr2L_9_1220001 chr2L_1220001 RAL-810 20 chr2L 1261138 1261259 chr2L 1261220 1261339 15 80 0.0 0.0 0.0 15.0 201 chr2L 1261138 intron robo3 + chr2L 1261238 intron robo3 + chr2L 1261339 intron robo3 + chr2L_15_1260001 chr2L_1260001 RAL-810 21 chr2L 1273413 1273441 chr2L 1273489 1273517 4 72 1.5 1.5 1.5 1.6 104 chr2L 1273413 intron robo3 + chr2L 1273465 intron robo3 + chr2L 1273517 intron robo3 + chr2L_4_1270001 chr2L_1270001 RAL-810 22 chr2L 1301755 1301783 chr2L 1302292 1302322 gypsy 13 539 4.5 4.0 4.2 2.5 567 chr2L 1301755 intergenic not near genes chr2L 1302038 intergenic not near genes chr2L 1302322 intergenic not near genes chr2L_13_1300001 chr2L_1300001 RAL-810 23 chr2L 1570686 1570719 chr2L 1573558 1573591 F-element 9 2872 3.0 2.5 2.8 2.4 2905 chr2L 1570686 intron haf + chr2L 1572138 intron haf + chr2L 1573591 intron haf + chr2L_9_1570001 chr2L_1570001 RAL-810 24 chr2L 1590962 1590990 chr2L 1591037 1591065 9 75 2.5 2.0 2.2 2.8 103 chr2L 1590962 intron haf + chr2L 1591014 intron haf + chr2L 1591065 intron haf + chr2L_9_1590001 chr2L_1590001 RAL-810 25 chr2L 1597880 1597885 chr2L 1597931 1597961 4 70 2.5 1.0 1.8 1.4 81 chr2L 1597880 intron,intron haf +,CG31935 - chr2L 1597920 intron,intron haf +,CG31935 - chr2L 1597961 intron,intron haf +,CG31935 - chr2L_4_1595001 chr2L_1595001 RAL-810 26 chr2L 1678980 1678994 chr2L 1686445 1686459 blood 5 7465 2.5 3.5 3.0 1.2 7479 chr2L 1678980 intron chinmo + chr2L 1682720 intron chinmo + chr2L 1686459 intron chinmo + chr2L_5_1680001 chr2L_1680001 RAL-810 27 chr2L 1678995 1679009 chr2L 1686440 1686474 blood 6 7461 1.0 1.5 1.2 2.7 7479 chr2L 1678995 intron chinmo + chr2L 1682734 intron chinmo + chr2L 1686474 intron chinmo + chr2L_6_1680001 chr2L_1680001 RAL-810 28 chr2L 1724803 1724837 chr2L 1724885 1724919 11 82 2.0 4.0 3.0 2.8 116 chr2L 1724803 3` UTR Eno - chr2L 1724861 3` UTR Eno - chr2L 1724919 3` UTR Eno - chr2L_11_1720001 chr2L_1720001 RAL-810 29 chr2L 1728386 1728406 chr2L 1728459 1728491 17 81 1.0 4.0 2.5 4.9 105 chr2L 1728386 intron Eno - chr2L 1728438 intron Eno - chr2L 1728491 intron Eno - chr2L_17_1725001 chr2L_1725001 RAL-810 30 chr2L 1736022 1736039 chr2L 1736136 1736153 10 114 2.5 3.0 2.8 2.6 131 chr2L 1736022 intron CG17646 + chr2L 1736088 intron CG17646 + chr2L 1736153 intron CG17646 + chr2L_10_1735001 chr2L_1735001 RAL-810 31 chr2L 1891635 1891643 chr2L 1891717 1891728 5 85 2.0 3.0 2.5 1.4 93 chr2L 1891635 intron CG7337 + chr2L 1891682 intron CG7337 + chr2L 1891728 intron CG7337 + chr2L_5_1890001 chr2L_1890001 RAL-810 32 chr2L 1993550 1993582 chr2L 1995341 1995373 13 1791 2.0 3.0 2.5 3.7 1823 chr2L 1993550 intergenic not near genes chr2L 1994462 intergenic not near genes chr2L 1995373 intergenic not near genes chr2L_13_1990001 chr2L_1990001 RAL-810 33 chr2L 2044737 2044766 chr2L 2044963 2044992 4 226 1.5 0.5 1.0 2.0 255 chr2L 2044737 3` UTR CR45298 - chr2L 2044864 3` UTR CR45298 - chr2L 2044992 3` UTR CR45298 - chr2L_4_2040001 chr2L_2040001 RAL-810 34 chr2L 2049227 2049232 chr2L 2049306 2049316 4 83 0.0 6.5 3.2 1.0 89 chr2L 2049227 intergenic not near genes chr2L 2049272 intergenic not near genes chr2L 2049316 intergenic not near genes chr2L_4_2045001 chr2L_2045001 RAL-810 35 chr2L 2100382 2100405 chr2L 2109533 2109546 roo 6 9149 4.0 3.5 3.8 1.2 9164 chr2L 2100382 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109546 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-810 36 chr2L 2260807 2260836 chr2L 2260889 2260922 7 85 1.5 3.0 2.2 2.2 115 chr2L 2260807 intergenic not near genes chr2L 2260864 intergenic not near genes chr2L 2260922 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-810 37 chr2L 2303506 2303534 chr2L 2303589 2303616 9 82 0.5 3.0 1.8 3.2 110 chr2L 2303506 intergenic not near genes chr2L 2303561 intergenic not near genes chr2L 2303616 intergenic not near genes chr2L_9_2300001 chr2L_2300001 RAL-810 38 chr2L 2311071 2311083 chr2L 2311167 2311179 6 96 1.5 0.0 0.8 3.3 108 chr2L 2311071 intron CG9967 - chr2L 2311125 intron CG9967 - chr2L 2311179 intron CG9967 - chr2L_6_2310001 chr2L_2310001 RAL-810 39 chr2L 2319443 2319472 chr2L 2319533 2319569 7 94 3.0 0.0 1.5 2.8 126 chr2L 2319443 intron,intron CG9967 -,eys + chr2L 2319506 intron,intron CG9967 -,eys + chr2L 2319569 intron,intron CG9967 -,eys + chr2L_7_2315001 chr2L_2315001 RAL-810 40 chr2L 2334033 2334066 chr2L 2335092 2335125 12 1059 1.0 3.0 2.0 4.0 1092 chr2L 2334033 intron,intron CG9967 -,eys + chr2L 2334579 intron,intron CG9967 -,eys + chr2L 2335125 intron,intron CG9967 -,eys + chr2L_12_2330001 chr2L_2330001 RAL-810 41 chr2L 2372364 2372404 chr2L 2372450 2372484 5 84 0.0 1.5 0.8 2.8 120 chr2L 2372364 intergenic CG3609 - chr2L 2372424 intergenic CG3609 - chr2L 2372484 3` UTR CG3609 - chr2L_5_2370001 chr2L_2370001 RAL-810 42 chr2L 2547961 2547984 chr2L 2549169 2549192 5 1208 7.0 14.0 10.5 0.4 1231 chr2L 2547961 intergenic not near genes chr2L 2548576 intergenic not near genes chr2L 2549192 intergenic not near genes chr2L_5_2545001 chr2L_2545001 RAL-810 43 chr2L 2557200 2557215 chr2L 2557276 2557291 6 76 1.5 6.5 4.0 1.2 91 chr2L 2557200 intergenic not near genes chr2L 2557246 intergenic not near genes chr2L 2557291 intergenic not near genes chr2L_6_2555001 chr2L_2555001 RAL-810 44 chr2L 2560059 2560086 chr2L 2560148 2560176 6 89 0.5 3.5 2.0 2.0 117 chr2L 2560059 intergenic not near genes chr2L 2560118 intergenic not near genes chr2L 2560176 intergenic not near genes chr2L_6_2560001 chr2L_2560001 RAL-810 45 chr2L 2587814 2587826 chr2L 2587893 2587902 6 78 4.5 3.0 3.8 1.2 88 chr2L 2587814 intergenic not near genes chr2L 2587858 intergenic not near genes chr2L 2587902 intergenic not near genes chr2L_6_2585001 chr2L_2585001 RAL-810 46 chr2L 2661201 2661236 chr2L 2663034 2663052 I-element 5 1830 2.0 0.5 1.2 2.3 1851 chr2L 2661201 intergenic not near genes chr2L 2662126 intergenic not near genes chr2L 2663052 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-810 47 chr2L 2667637 2667655 chr2L 2667716 2667730 9 78 1.5 1.0 1.2 4.1 93 chr2L 2667637 intergenic not near genes chr2L 2667684 intergenic not near genes chr2L 2667730 intergenic not near genes chr2L_9_2665001 chr2L_2665001 RAL-810 48 chr2L 2698869 2698890 chr2L 2698956 2698977 10 86 0.5 0.5 0.5 6.7 108 chr2L 2698869 intron CG31690 + chr2L 2698923 intron CG31690 + chr2L 2698977 intron CG31690 + chr2L_10_2695001 chr2L_2695001 RAL-810 49 chr2L 2702986 2703003 chr2L 2703187 2703198 8 200 3.5 3.0 3.2 1.9 212 chr2L 2702986 intron CG31690 + chr2L 2703092 intron CG31690 + chr2L 2703198 intron CG31690 + chr2L_8_2700001 chr2L_2700001 RAL-810 50 chr2L 2713514 2713542 chr2L 2713612 2713631 8 97 2.5 1.5 2.0 2.7 117 chr2L 2713514 intron CG31690 + chr2L 2713572 intron CG31690 + chr2L 2713631 intron CG31690 + chr2L_8_2710001 chr2L_2710001 RAL-810 51 chr2L 2932448 2932474 chr2L 2932905 2932931 13 457 1.5 1.5 1.5 5.2 483 chr2L 2932448 intron lilli + chr2L 2932690 intron lilli + chr2L 2932931 intron lilli + chr2L_13_2930001 chr2L_2930001 RAL-810 52 chr2L 2937419 2937451 chr2L 2937496 2937528 8 77 2.5 3.5 3.0 2.0 109 chr2L 2937419 intron lilli + chr2L 2937474 intron lilli + chr2L 2937528 intron lilli + chr2L_8_2935001 chr2L_2935001 RAL-810 53 chr2L 3097652 3097659 chr2L 3097733 3097740 5 81 2.5 5.0 3.8 1.0 88 chr2L 3097652 intron toc - chr2L 3097696 intron toc - chr2L 3097740 intron toc - chr2L_5_3095001 chr2L_3095001 RAL-810 54 chr2L 3134951 3134956 chr2L 3135028 3135033 4 77 3.5 2.0 2.8 1.1 82 chr2L 3134951 intron toc - chr2L 3134992 intron toc - chr2L 3135033 intron toc - chr2L_4_3130001 chr2L_3130001 RAL-810 55 chr2L 3312079 3312114 chr2L 3312184 3312219 14 104 0.0 1.0 0.5 9.3 140 chr2L 3312079 intron CG3277 + chr2L 3312149 intron CG3277 + chr2L 3312219 intron CG3277 + chr2L_14_3310001 chr2L_3310001 RAL-810 56 chr2L 3323259 3323279 chr2L 3323364 3323385 7 107 3.0 2.0 2.5 2.0 126 chr2L 3323259 intergenic CG8837 + chr2L 3323322 intergenic CG8837 + chr2L 3323385 intergenic CG8837 + chr2L_7_3320001 chr2L_3320001 RAL-810 57 chr2L 3386238 3386268 chr2L 3386345 3386366 9 105 2.0 4.5 3.2 2.1 128 chr2L 3386238 intergenic not near genes chr2L 3386302 intergenic not near genes chr2L 3386366 intergenic CR45301 - chr2L_9_3385001 chr2L_3385001 RAL-810 58 chr2L 3388599 3388630 chr2L 3388840 3388871 pogo 6 241 5.0 1.0 3.0 1.5 272 chr2L 3388599 intergenic CG42460 - chr2L 3388735 intergenic CG42460 - chr2L 3388871 intergenic CG42460 -,CR44791 + chr2L_6_3385001 chr2L_3385001 RAL-810 59 chr2L 3393545 3393577 chr2L 3393656 3393687 9 110 2.0 3.5 2.8 2.4 142 chr2L 3393545 intergenic not near genes chr2L 3393616 intergenic not near genes chr2L 3393687 intergenic not near genes chr2L_9_3390001 chr2L_3390001 RAL-810 60 chr2L 3443035 3443052 chr2L 3443117 3443130 9 81 7.0 2.0 4.5 1.6 95 chr2L 3443035 intergenic not near genes chr2L 3443082 intergenic not near genes chr2L 3443130 intergenic not near genes chr2L_9_3440001 chr2L_3440001 RAL-810 61 chr2L 3447656 3447663 chr2L 3447751 3447758 5 95 5.0 2.5 3.8 1.0 102 chr2L 3447656 intergenic CG2772 + chr2L 3447707 intergenic CG2772 + chr2L 3447758 intergenic CG2772 + chr2L_5_3445001 chr2L_3445001 RAL-810 62 chr2L 3447668 3447689 chr2L 3447750 3447784 8 93 1.5 2.5 2.0 2.7 116 chr2L 3447668 intergenic CG2772 + chr2L 3447726 intergenic CG2772 + chr2L 3447784 intergenic CG2772 + chr2L_8_3445001 chr2L_3445001 RAL-810 63 chr2L 3508351 3508376 chr2L 3508429 3508452 13 78 1.5 3.5 2.5 3.7 101 chr2L 3508351 intergenic tim -,CR45299 + chr2L 3508402 intergenic CR45299 +,tim - chr2L 3508452 intergenic CR45299 +,tim - chr2L_13_3505001 chr2L_3505001 RAL-810 64 chr2L 3603627 3603647 chr2L 3603723 3603743 10 96 2.5 1.5 2.0 3.3 116 chr2L 3603627 intergenic not near genes chr2L 3603685 intergenic not near genes chr2L 3603743 intergenic odd - chr2L_10_3600001 chr2L_3600001 RAL-810 65 chr2L 3649788 3649805 chr2L 3654990 3655007 copia 7 5202 0.5 5.0 2.8 1.8 5219 chr2L 3649788 intron for - chr2L 3652398 intron for - chr2L 3655007 intron for - chr2L_7_3650001 chr2L_3650001 RAL-810 66 chr2L 3785670 3785678 chr2L 3785759 3785767 4 89 0.5 2.0 1.2 1.8 97 chr2L 3785670 intergenic CG31960 +,CG31958 + chr2L 3785718 intergenic CG31958 +,CG31960 + chr2L 3785767 5` UTR CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-810 67 chr2L 3819033 3819060 chr2L 3819115 3819142 6 82 2.0 0.5 1.2 2.7 109 chr2L 3819033 intergenic CR44077 + chr2L 3819088 intergenic not near genes chr2L 3819142 intergenic not near genes chr2L_6_3815001 chr2L_3815001 RAL-810 68 chr2L 3839097 3839099 chr2L 11022640 11022640 4 7183542 10.5 13.5 12.0 0.3 7183543 chr2L 3839097 3` UTR slp2 + chr2L 7430868 intron CG5958 - chr2L 11022640 intron Samuel - chr2L_4_7430001 chr2L_7430001 RAL-810 69 chr2L 3891894 3891915 chr2L 3891979 3892000 6 85 5.0 2.0 3.5 1.3 106 chr2L 3891894 intron capu - chr2L 3891947 intron capu - chr2L 3892000 intron capu - chr2L_6_3890001 chr2L_3890001 RAL-810 70 chr2L 3943805 3943827 chr2L 3943896 3943918 6 91 0.0 4.0 2.0 2.0 113 chr2L 3943805 intron fred - chr2L 3943862 intron fred - chr2L 3943918 intron fred - chr2L_6_3940001 chr2L_3940001 RAL-810 71 chr2L 3950089 3950102 chr2L 3950165 3950177 6 76 1.5 3.0 2.2 1.9 88 chr2L 3950089 intron fred - chr2L 3950133 intron fred - chr2L 3950177 intron fred - chr2L_6_3950001 chr2L_3950001 RAL-810 72 chr2L 4066047 4066059 chr2L 4068872 4068884 Juan 5 2825 2.5 3.0 2.8 1.3 2837 chr2L 4066047 intron ed + chr2L 4067466 intron ed + chr2L 4068884 intron ed + chr2L_5_4065001 chr2L_4065001 RAL-810 73 chr2L 4108627 4108643 chr2L 4108712 4108728 6 85 4.5 1.0 2.8 1.6 101 chr2L 4108627 intron ed + chr2L 4108678 intron ed + chr2L 4108728 intron ed + chr2L_6_4105001 chr2L_4105001 RAL-810 74 chr2L 4150635 4150654 chr2L 4150715 4150734 7 80 1.0 5.0 3.0 1.8 99 chr2L 4150635 exon CG2955 + chr2L 4150684 exon CG2955 + chr2L 4150734 exon CG2955 + chr2L_7_4150001 chr2L_4150001 RAL-810 75 chr2L 4265659 4265671 chr2L 4265749 4265761 4 90 1.0 0.0 0.5 2.7 102 chr2L 4265659 intergenic not near genes chr2L 4265710 intergenic not near genes chr2L 4265761 intergenic not near genes chr2L_4_4265001 chr2L_4265001 RAL-810 76 chr2L 4285721 4285731 chr2L 4285797 4285810 4 77 4.0 2.0 3.0 1.0 89 chr2L 4285721 intron tutl + chr2L 4285766 intron tutl + chr2L 4285810 intron tutl + chr2L_4_4285001 chr2L_4285001 RAL-810 77 chr2L 4351472 4351502 chr2L 4351548 4351578 5 76 2.0 1.5 1.8 1.8 106 chr2L 4351472 intergenic CR44700 + chr2L 4351525 intergenic CR44700 + chr2L 4351578 intergenic CR44700 + chr2L_5_4350001 chr2L_4350001 RAL-810 78 chr2L 4388434 4388468 chr2L 4388577 4388612 10 144 1.5 4.5 3.0 2.5 178 chr2L 4388434 5` UTR Tps1 + chr2L 4388523 5` UTR Tps1 + chr2L 4388612 5` UTR Tps1 + chr2L_10_4385001 chr2L_4385001 RAL-810 79 chr2L 4410066 4410093 chr2L 4410214 4410241 10 147 4.0 1.0 2.5 2.9 175 chr2L 4410066 intron CG15431 - chr2L 4410154 intron CG15431 - chr2L 4410241 intron CG15431 - chr2L_10_4410001 chr2L_4410001 RAL-810 80 chr2L 4414933 4414961 chr2L 4415026 4415054 6 93 4.0 3.5 3.8 1.2 121 chr2L 4414933 intron CG15431 - chr2L 4414994 intron CG15431 - chr2L 4415054 intron CG15431 - chr2L_6_4410001 chr2L_4410001 RAL-810 81 chr2L 4601708 4601736 chr2L 4609149 4609177 mdg1 4 7441 3.0 2.0 2.5 1.1 7469 chr2L 4601708 intron dp - chr2L 4605442 intron dp - chr2L 4609177 intron dp - chr2L_4_4605001 chr2L_4605001 RAL-810 82 chr2L 4725345 4725377 chr2L 4725676 4725709 6 332 3.0 3.5 3.2 1.4 364 chr2L 4725345 intergenic not near genes chr2L 4725527 intergenic not near genes chr2L 4725709 intergenic not near genes chr2L_6_4725001 chr2L_4725001 RAL-810 83 chr2L 4819496 4819515 chr2L 4819619 4819637 6 123 3.0 0.5 1.8 2.1 141 chr2L 4819496 intergenic not near genes chr2L 4819566 intergenic not near genes chr2L 4819637 intergenic not near genes chr2L_6_4815001 chr2L_4815001 RAL-810 84 chr2L 4862276 4862304 chr2L 4862352 4862380 4 76 1.0 2.0 1.5 1.6 104 chr2L 4862276 intron pog + chr2L 4862328 intron pog + chr2L 4862380 intron pog + chr2L_4_4860001 chr2L_4860001 RAL-810 85 chr2L 4918166 4918178 chr2L 4923239 4923251 jockey 7 5073 5.5 0.0 2.8 1.8 5085 chr2L 4918166 intron hoe1 - chr2L 4920708 intron hoe1 - chr2L 4923251 intron hoe1 - chr2L_7_4920001 chr2L_4920001 RAL-810 86 chr2L 4923236 4923254 chr2L 4923327 4923345 9 91 0.0 0.5 0.2 7.5 109 chr2L 4923236 intron hoe1 - chr2L 4923290 intron hoe1 - chr2L 4923345 intron hoe1 - chr2L_9_4920001 chr2L_4920001 RAL-810 87 chr2L 4953512 4953541 chr2L 4953753 4953762 pogo 10 239 2.0 0.0 1.0 5.0 250 chr2L 4953512 intergenic Jon25Bii - chr2L 4953637 intergenic not near genes chr2L 4953762 intergenic not near genes chr2L_10_4950001 chr2L_4950001 RAL-810 88 chr2L 5092420 5092442 chr2L 5092507 5092529 7 86 2.5 4.0 3.2 1.7 109 chr2L 5092420 intron pgant5 - chr2L 5092474 intron pgant5 - chr2L 5092529 intron pgant5 - chr2L_7_5090001 chr2L_5090001 RAL-810 89 chr2L 5307145 5307154 chr2L 5307229 5307238 4 84 19.0 19.5 19.2 0.2 93 chr2L 5307145 intron vri + chr2L 5307192 intron vri + chr2L 5307238 intron vri + chr2L_4_5305001 chr2L_5305001 RAL-810 90 chr2L 5342772 5342801 chr2L 5345152 5345181 Doc 7 2380 4.5 3.5 4.0 1.4 2409 chr2L 5342772 intergenic not near genes chr2L 5343976 intergenic not near genes chr2L 5345181 intergenic not near genes chr2L_7_5340001 chr2L_5340001 RAL-810 91 chr2L 5500061 5500077 chr2L 5500147 5500163 7 86 3.0 1.5 2.2 2.2 102 chr2L 5500061 intergenic not near genes chr2L 5500112 intergenic not near genes chr2L 5500163 intergenic not near genes chr2L_7_5500001 chr2L_5500001 RAL-810 92 chr2L 5508531 5508564 chr2L 5508605 5508640 11 76 3.0 1.0 2.0 3.7 109 chr2L 5508531 intergenic not near genes chr2L 5508586 intergenic not near genes chr2L 5508640 intergenic not near genes chr2L_11_5505001 chr2L_5505001 RAL-810 93 chr2L 5511324 5511356 chr2L 5511407 5511439 8 83 2.5 3.5 3.0 2.0 115 chr2L 5511324 intergenic not near genes chr2L 5511382 intergenic not near genes chr2L 5511439 intergenic not near genes chr2L_8_5510001 chr2L_5510001 RAL-810 94 chr2L 5655522 5655555 chr2L 5655598 5655631 10 76 1.0 1.5 1.2 4.5 109 chr2L 5655522 intron CG31646 - chr2L 5655576 intron CG31646 - chr2L 5655631 intron CG31646 - chr2L_10_5655001 chr2L_5655001 RAL-810 95 chr2L 5695860 5695891 chr2L 5695952 5695983 6 92 2.0 3.5 2.8 1.6 123 chr2L 5695860 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5695983 intergenic not near genes chr2L_6_5695001 chr2L_5695001 RAL-810 96 chr2L 5720257 5720292 chr2L 5720344 5720379 13 87 1.5 4.5 3.0 3.2 122 chr2L 5720257 intron CG11149 - chr2L 5720318 intron CG11149 - chr2L 5720379 intron CG11149 - chr2L_13_5720001 chr2L_5720001 RAL-810 97 chr2L 5774591 5774605 chr2L 5774805 5774816 4 213 2.0 2.5 2.2 1.2 225 chr2L 5774591 intron CG9171 - chr2L 5774704 intron CG9171 - chr2L 5774816 intron CG9171 - chr2L_4_5770001 chr2L_5770001 RAL-810 98 chr2L 5819672 5819707 chr2L 5819756 5819791 14 84 1.0 2.0 1.5 5.6 119 chr2L 5819672 intergenic not near genes chr2L 5819732 intergenic not near genes chr2L 5819791 intergenic not near genes chr2L_14_5815001 chr2L_5815001 RAL-810 99 chr2L 5820392 5820426 chr2L 5820548 5820582 14 156 1.0 1.0 1.0 7.0 190 chr2L 5820392 intergenic not near genes chr2L 5820487 intergenic not near genes chr2L 5820582 intergenic not near genes chr2L_14_5820001 chr2L_5820001 RAL-810 100 chr2L 5827711 5827736 chr2L 5836719 5836744 roo 9 9006 2.5 2.5 2.5 2.6 9033 chr2L 5827711 intron TrissinR + chr2L 5832228 intron TrissinR + chr2L 5836744 intron TrissinR + chr2L_9_5830001 chr2L_5830001 RAL-810 101 chr2L 5897595 5897628 chr2L 5897677 5897692 15 76 2.5 2.5 2.5 4.3 97 chr2L 5897595 intergenic not near genes chr2L 5897644 intergenic not near genes chr2L 5897692 intergenic not near genes chr2L_15_5895001 chr2L_5895001 RAL-810 102 chr2L 5962269 5962295 chr2L 5962345 5962371 12 76 5.5 3.0 4.2 2.3 102 chr2L 5962269 intergenic not near genes chr2L 5962320 intergenic not near genes chr2L 5962371 intergenic not near genes chr2L_12_5960001 chr2L_5960001 RAL-810 103 chr2L 6002440 6002470 chr2L 6002526 6002556 14 86 2.5 2.0 2.2 4.4 116 chr2L 6002440 3` UTR Tsp26A + chr2L 6002498 3` UTR Tsp26A + chr2L 6002556 3` UTR Tsp26A + chr2L_14_6000001 chr2L_6000001 RAL-810 104 chr2L 6050445 6050463 chr2L 6050549 6050567 4 104 1.5 0.5 1.0 2.0 122 chr2L 6050445 intergenic CG12393 +,CG9135 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050567 intergenic CG12393 +,CG9135 + chr2L_4_6050001 chr2L_6050001 RAL-810 105 chr2L 6130769 6130789 chr2L 6130854 6130874 7 85 5.5 0.5 3.0 1.8 105 chr2L 6130769 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130822 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130874 intergenic CG9222 +,CG42730 -,tectonic - chr2L_7_6130001 chr2L_6130001 RAL-810 106 chr2L 6136531 6136560 chr2L 6136648 6136677 5 117 0.0 1.0 0.5 3.3 146 chr2L 6136531 intergenic not near genes chr2L 6136604 intergenic not near genes chr2L 6136677 intergenic not near genes chr2L_5_6135001 chr2L_6135001 RAL-810 107 chr2L 6185441 6185470 chr2L 6185519 6185548 6 77 0.5 4.0 2.2 1.9 107 chr2L 6185441 intron CG34380 + chr2L 6185494 intron CG34380 + chr2L 6185548 intron CG34380 + chr2L_6_6185001 chr2L_6185001 RAL-810 108 chr2L 6200007 6200029 chr2L 6200158 6200180 8 149 2.0 3.0 2.5 2.3 173 chr2L 6200007 intron CG34380 + chr2L 6200094 intron CG34380 + chr2L 6200180 intron CG34380 + chr2L_8_6200001 chr2L_6200001 RAL-810 109 chr2L 6251147 6251178 chr2L 6251516 6251547 12 369 2.5 3.5 3.0 3.0 400 chr2L 6251147 intergenic not near genes chr2L 6251347 intergenic not near genes chr2L 6251547 intergenic not near genes chr2L_12_6250001 chr2L_6250001 RAL-810 110 chr2L 6283943 6283971 chr2L 6284054 6284082 4 111 0.0 1.0 0.5 2.7 139 chr2L 6283943 intron Ddr + chr2L 6284012 intron Ddr + chr2L 6284082 intron Ddr + chr2L_4_6280001 chr2L_6280001 RAL-810 111 chr2L 6342390 6342423 chr2L 6342472 6342505 10 82 0.0 2.0 1.0 5.0 115 chr2L 6342390 intron Cpr + chr2L 6342448 intron Cpr + chr2L 6342505 intron Cpr + chr2L_10_6340001 chr2L_6340001 RAL-810 112 chr2L 6363149 6363180 chr2L 6366071 6366101 Burdock 7 2922 1.5 2.0 1.8 2.5 2952 chr2L 6363149 intergenic not near genes chr2L 6364625 intergenic not near genes chr2L 6366101 intergenic not near genes chr2L_7_6360001 chr2L_6360001 RAL-810 113 chr2L 6426860 6426882 chr2L 6445120 6445141 roo 10 18260 4.5 6.0 5.2 1.6 18281 chr2L 6426860 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445141 exon CG9527 - chr2L_10_6435001 chr2L_6435001 RAL-810 114 chr2L 6470743 6470752 chr2L 6470838 6470858 6 103 2.0 2.5 2.2 1.9 115 chr2L 6470743 intron mmy - chr2L 6470800 intron mmy - chr2L 6470858 intron mmy - chr2L_6_6470001 chr2L_6470001 RAL-810 115 chr2L 6544375 6544391 chr2L 6544467 6544483 4 92 3.0 5.5 4.2 0.8 108 chr2L 6544375 intron eya - chr2L 6544429 intron eya - chr2L 6544483 intron eya - chr2L_4_6540001 chr2L_6540001 RAL-810 116 chr2L 6740745 6740760 chr2L 6740832 6740847 6 86 0.0 3.0 1.5 2.4 102 chr2L 6740745 intergenic not near genes chr2L 6740796 intergenic not near genes chr2L 6740847 intergenic not near genes chr2L_6_6740001 chr2L_6740001 RAL-810 117 chr2L 6836500 6836530 chr2L 6836582 6836612 9 82 5.0 5.0 5.0 1.5 112 chr2L 6836500 intron sens-2 + chr2L 6836556 intron sens-2 + chr2L 6836612 intron sens-2 + chr2L_9_6835001 chr2L_6835001 RAL-810 118 chr2L 6850379 6850414 chr2L 6850462 6850497 10 83 3.0 0.5 1.8 3.6 118 chr2L 6850379 intergenic not near genes chr2L 6850438 intergenic not near genes chr2L 6850497 intergenic not near genes chr2L_10_6850001 chr2L_6850001 RAL-810 119 chr2L 6891445 6891459 chr2L 6891543 6891557 4 98 4.0 2.5 3.2 1.0 112 chr2L 6891445 intron Nlg2 + chr2L 6891501 intron Nlg2 + chr2L 6891557 intron Nlg2 + chr2L_4_6890001 chr2L_6890001 RAL-810 120 chr2L 6991391 6991427 chr2L 6998555 6998589 HMS-Beagle 9 7163 1.0 1.0 1.0 4.5 7198 chr2L 6991391 intron uif - chr2L 6994990 intron uif - chr2L 6998589 intron uif - chr2L_9_6990001 chr2L_6990001 RAL-810 121 chr2L 7000371 7000392 chr2L 7000449 7000470 10 78 1.5 1.0 1.2 4.5 99 chr2L 7000371 intron uif - chr2L 7000420 intron uif - chr2L 7000470 intron uif - chr2L_10_7000001 chr2L_7000001 RAL-810 122 chr2L 7007416 7007432 chr2L 7007519 7007533 6 102 1.0 2.5 1.8 2.1 117 chr2L 7007416 intron uif - chr2L 7007474 intron uif - chr2L 7007533 intron uif - chr2L_6_7005001 chr2L_7005001 RAL-810 123 chr2L 7081706 7081729 chr2L 7081787 7081810 6 81 4.0 2.5 3.2 1.4 104 chr2L 7081706 intron Pvf2 - chr2L 7081758 intron Pvf2 - chr2L 7081810 intron Pvf2 - chr2L_6_7080001 chr2L_7080001 RAL-810 124 chr2L 7088888 7088900 chr2L 7089089 7089101 4 201 0.0 1.5 0.8 2.2 213 chr2L 7088888 intergenic not near genes chr2L 7088994 intergenic not near genes chr2L 7089101 intergenic not near genes chr2L_4_7085001 chr2L_7085001 RAL-810 125 chr2L 7125792 7125808 chr2L 7125908 7125924 6 116 3.5 3.5 3.5 1.3 132 chr2L 7125792 intron Pvf3 - chr2L 7125858 intron Pvf3 - chr2L 7125924 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-810 126 chr2L 7126861 7126878 chr2L 7126940 7126957 7 79 5.0 0.0 2.5 2.0 96 chr2L 7126861 intron Pvf3 - chr2L 7126909 intron Pvf3 - chr2L 7126957 intron Pvf3 - chr2L_7_7125001 chr2L_7125001 RAL-810 127 chr2L 7249620 7249649 chr2L 7249702 7249721 8 81 0.5 3.5 2.0 2.7 101 chr2L 7249620 intergenic Ndae1 - chr2L 7249670 intergenic Ndae1 - chr2L 7249721 intergenic Ndae1 - chr2L_8_7245001 chr2L_7245001 RAL-810 128 chr2L 7325922 7325944 chr2L 7325995 7326029 5 79 1.5 0.5 1.0 2.5 107 chr2L 7325922 intergenic not near genes chr2L 7325976 intergenic not near genes chr2L 7326029 intergenic not near genes chr2L_5_7325001 chr2L_7325001 RAL-810 129 chr2L 7335212 7335232 chr2L 7335309 7335329 7 97 6.0 3.0 4.5 1.3 117 chr2L 7335212 intron Wnt6 + chr2L 7335270 intron Wnt6 + chr2L 7335329 intron Wnt6 + chr2L_7_7335001 chr2L_7335001 RAL-810 130 chr2L 7337015 7337020 chr2L 7337092 7337097 4 76 3.5 2.5 3.0 1.0 82 chr2L 7337015 intron Wnt6 + chr2L 7337056 intron Wnt6 + chr2L 7337097 intron Wnt6 + chr2L_4_7335001 chr2L_7335001 RAL-810 131 chr2L 7399308 7399335 chr2L 7399681 7399708 8 372 2.5 3.5 3.0 2.0 400 chr2L 7399308 intergenic not near genes chr2L 7399508 intergenic not near genes chr2L 7399708 intergenic not near genes chr2L_8_7395001 chr2L_7395001 RAL-810 132 chr2L 7489696 7489726 chr2L 7489784 7489815 6 88 3.5 4.0 3.8 1.2 119 chr2L 7489696 intron Ziz - chr2L 7489756 intron Ziz - chr2L 7489815 intron Ziz - chr2L_6_7485001 chr2L_7485001 RAL-810 133 chr2L 7516161 7516196 chr2L 7516248 7516283 9 84 1.5 1.0 1.2 4.1 122 chr2L 7516161 intron RapGAP1 - chr2L 7516222 intron RapGAP1 - chr2L 7516283 intron RapGAP1 - chr2L_9_7515001 chr2L_7515001 RAL-810 134 chr2L 7579892 7579918 chr2L 7579974 7580000 12 81 3.0 3.0 3.0 3.0 108 chr2L 7579892 intergenic not near genes chr2L 7579946 intergenic not near genes chr2L 7580000 intergenic not near genes chr2L_12_7575001 chr2L_7575001 RAL-810 135 chr2L 7609530 7609750 chr2L 7609625 7609827 10 82 3.0 0.0 1.5 4.0 297 chr2L 7609530 intron CG6739 + chr2L 7609678 intron CG6739 + chr2L 7609827 intron CG6739 + chr2L_10_7605001 chr2L_7605001 RAL-810 136 chr2L 7742564 7742569 chr2L 7742613 7742649 4 72 0.5 3.0 1.8 1.4 85 chr2L 7742564 intergenic not near genes chr2L 7742606 intergenic not near genes chr2L 7742649 intergenic not near genes chr2L_4_7740001 chr2L_7740001 RAL-810 137 chr2L 7959044 7959060 chr2L 7960455 7960471 pogo 5 1411 2.0 0.0 1.0 2.5 1427 chr2L 7959044 intron Snoo - chr2L 7959758 intron Snoo - chr2L 7960471 intron Snoo - chr2L_5_7955001 chr2L_7955001 RAL-810 138 chr2L 7977102 7977112 chr2L 7984078 7984088 297 5 6974 2.0 3.5 2.8 1.3 6986 chr2L 7977102 intron Snoo - chr2L 7980595 intron Snoo - chr2L 7984088 intron,5` UTR Snoo -,CG7231 + chr2L_5_7980001 chr2L_7980001 RAL-810 139 chr2L 8013616 8013633 chr2L 8018821 8018838 copia 6 5204 0.5 0.0 0.2 5.0 5222 chr2L 8013616 intron Tg + chr2L 8016227 intron Tg + chr2L 8018838 intron Tg + chr2L_6_8015001 chr2L_8015001 RAL-810 140 chr2L 8018819 8018834 chr2L 8023603 8023618 Doc 4 4784 0.0 3.5 1.8 1.4 4799 chr2L 8018819 intron Tg + chr2L 8021218 intron Tg + chr2L 8023618 intron Tg + chr2L_4_8020001 chr2L_8020001 RAL-810 141 chr2L 8033037 8033052 chr2L 8033129 8033144 5 93 2.0 2.5 2.2 1.6 107 chr2L 8033037 intron,intron CG7367 -,Cka + chr2L 8033090 intron,intron CG7367 -,Cka + chr2L 8033144 intron,intron CG7367 -,Cka + chr2L_5_8030001 chr2L_8030001 RAL-810 142 chr2L 8044106 8044131 chr2L 8044185 8044210 5 79 2.0 1.5 1.8 1.8 104 chr2L 8044106 intron CG7466 + chr2L 8044158 intron CG7466 + chr2L 8044210 intron CG7466 + chr2L_5_8040001 chr2L_8040001 RAL-810 143 chr2L 8166039 8166065 chr2L 8166129 8166155 5 90 3.0 3.0 3.0 1.2 116 chr2L 8166039 intron Piezo + chr2L 8166097 intron Piezo + chr2L 8166155 intron Piezo + chr2L_5_8165001 chr2L_8165001 RAL-810 144 chr2L 8171274 8171299 chr2L 8171354 8171380 8 79 0.0 3.0 1.5 3.2 106 chr2L 8171274 intron Piezo + chr2L 8171327 intron Piezo + chr2L 8171380 intron Piezo + chr2L_8_8170001 chr2L_8170001 RAL-810 145 chr2L 8244737 8244746 chr2L 8244859 8244868 6 122 0.5 3.0 1.8 2.1 131 chr2L 8244737 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244868 intron CG8086 - chr2L_6_8240001 chr2L_8240001 RAL-810 146 chr2L 8330283 8330315 chr2L 8330368 8330400 7 85 1.5 0.0 0.8 3.9 117 chr2L 8330283 intron CG14275 + chr2L 8330342 intron CG14275 + chr2L 8330400 intron CG14275 + chr2L_7_8330001 chr2L_8330001 RAL-810 147 chr2L 8336935 8336963 chr2L 8337014 8337042 8 79 0.0 1.0 0.5 5.3 107 chr2L 8336935 intergenic not near genes chr2L 8336988 intergenic not near genes chr2L 8337042 intergenic not near genes chr2L_8_8335001 chr2L_8335001 RAL-810 148 chr2L 8369886 8369920 chr2L 8369992 8370026 14 105 3.0 4.0 3.5 3.1 140 chr2L 8369886 3` UTR Pp2A-29B + chr2L 8369956 3` UTR Pp2A-29B + chr2L 8370026 3` UTR Pp2A-29B + chr2L_14_8365001 chr2L_8365001 RAL-810 149 chr2L 8452420 8452451 chr2L 8461591 8461622 roo 9 9171 2.0 7.5 4.8 1.6 9202 chr2L 8452420 intron fu12 - chr2L 8457021 intron fu12 - chr2L 8461622 intron fu12 - chr2L_9_8455001 chr2L_8455001 RAL-810 150 chr2L 8502662 8502685 chr2L 8502746 8502769 8 84 2.0 1.5 1.8 2.9 107 chr2L 8502662 intron Dh31 - chr2L 8502716 intron Dh31 - chr2L 8502769 intron Dh31 - chr2L_8_8500001 chr2L_8500001 RAL-810 151 chr2L 8505153 8505181 chr2L 8505253 8505281 7 99 3.5 1.5 2.5 2.0 128 chr2L 8505153 intron Dh31 - chr2L 8505217 intron Dh31 - chr2L 8505281 intron Dh31 - chr2L_7_8505001 chr2L_8505001 RAL-810 152 chr2L 8508988 8509002 chr2L 8509090 8509104 5 102 0.0 2.5 1.2 2.3 116 chr2L 8508988 intergenic CG13096 - chr2L 8509046 intergenic CG13096 - chr2L 8509104 3` UTR CG13096 - chr2L_5_8505001 chr2L_8505001 RAL-810 153 chr2L 8594465 8594487 chr2L 8601519 8601541 297 5 7054 4.0 3.5 3.8 1.0 7076 chr2L 8594465 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598003 intron Sema-1a + chr2L 8601541 intron Sema-1a + chr2L_5_8595001 chr2L_8595001 RAL-810 154 chr2L 8612860 8612870 chr2L 8612937 8612947 7 77 3.5 5.0 4.2 1.3 87 chr2L 8612860 intron Sema-1a + chr2L 8612904 intron Sema-1a + chr2L 8612947 intron Sema-1a + chr2L_7_8610001 chr2L_8610001 RAL-810 155 chr2L 8629277 8629293 chr2L 8629354 8629370 8 77 3.5 3.0 3.2 1.9 93 chr2L 8629277 intron Sema-1a + chr2L 8629324 intron Sema-1a + chr2L 8629370 intron Sema-1a + chr2L_8_8625001 chr2L_8625001 RAL-810 156 chr2L 8723119 8723147 chr2L 8731496 8731524 Tirant 7 8377 1.5 2.0 1.8 2.5 8405 chr2L 8723119 intron raw - chr2L 8727322 intron raw - chr2L 8731524 intron raw - chr2L_7_8725001 chr2L_8725001 RAL-810 157 chr2L 8789309 8789341 chr2L 8789385 8789417 6 75 2.0 5.0 3.5 1.3 108 chr2L 8789309 intergenic not near genes chr2L 8789363 intergenic not near genes chr2L 8789417 intergenic not near genes chr2L_6_8785001 chr2L_8785001 RAL-810 158 chr2L 8815747 8815777 chr2L 8815826 8815858 5 81 0.5 3.5 2.0 1.7 111 chr2L 8815747 intergenic not near genes chr2L 8815802 intergenic not near genes chr2L 8815858 intergenic not near genes chr2L_5_8815001 chr2L_8815001 RAL-810 159 chr2L 8892025 8892047 chr2L 8892104 8892125 8 78 1.0 0.0 0.5 5.3 100 chr2L 8892025 3` UTR CG42713 + chr2L 8892075 3` UTR CG42713 + chr2L 8892125 3` UTR CG42713 + chr2L_8_8890001 chr2L_8890001 RAL-810 160 chr2L 8901086 8901109 chr2L 8901167 8901191 12 81 3.5 3.0 3.2 2.9 105 chr2L 8901086 intron CG34398 + chr2L 8901138 intron CG34398 + chr2L 8901191 intron CG34398 + chr2L_12_8900001 chr2L_8900001 RAL-810 161 chr2L 8902448 8902486 chr2L 8902595 8902633 10 147 0.0 0.0 0.0 10.0 185 chr2L 8902448 intron CG34398 + chr2L 8902540 intron CG34398 + chr2L 8902633 intron CG34398 + chr2L_10_8900001 chr2L_8900001 RAL-810 162 chr2L 8956226 8956243 chr2L 8956303 8956320 8 77 1.5 0.0 0.8 4.4 94 chr2L 8956226 intron CG31886 - chr2L 8956273 intron CG31886 - chr2L 8956320 intron CG31886 - chr2L_8_8955001 chr2L_8955001 RAL-810 163 chr2L 8987987 8988012 chr2L 8988068 8988093 9 81 3.0 2.5 2.8 2.4 106 chr2L 8987987 intron rost - chr2L 8988040 intron rost - chr2L 8988093 intron rost - chr2L_9_8985001 chr2L_8985001 RAL-810 164 chr2L 9000284 9000310 chr2L 9007792 9007820 roo 13 7509 5.0 3.5 4.2 2.5 7536 chr2L 9000284 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007820 intergenic not near genes chr2L_13_9000001 chr2L_9000001 RAL-810 165 chr2L 9084337 9084340 chr2L 16217660 16217660 8 7133321 10.5 10.0 10.2 0.7 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-810 166 chr2L 9116610 9116625 chr2L 9116713 9116732 5 107 2.5 2.0 2.2 1.6 122 chr2L 9116610 intergenic not near genes chr2L 9116671 intergenic not near genes chr2L 9116732 intergenic not near genes chr2L_5_9115001 chr2L_9115001 RAL-810 167 chr2L 9287328 9287356 chr2L 9287425 9287453 9 96 2.0 3.5 2.8 2.4 125 chr2L 9287328 intron Ggamma30A + chr2L 9287390 intron Ggamma30A + chr2L 9287453 intron Ggamma30A + chr2L_9_9285001 chr2L_9285001 RAL-810 168 chr2L 9303472 9303494 chr2L 9303549 9303571 7 77 0.0 5.0 2.5 2.0 99 chr2L 9303472 intergenic not near genes chr2L 9303522 intergenic not near genes chr2L 9303571 intergenic not near genes chr2L_7_9300001 chr2L_9300001 RAL-810 169 chr2L 9335012 9335047 chr2L 9335091 9335126 9 79 2.0 1.5 1.8 3.2 114 chr2L 9335012 intron Eaat1 + chr2L 9335069 intron Eaat1 + chr2L 9335126 intron Eaat1 + chr2L_9_9335001 chr2L_9335001 RAL-810 170 chr2L 9393496 9393521 chr2L 9396463 9396488 jockey 8 2967 3.5 2.5 3.0 2.0 2992 chr2L 9393496 intron Shawl - chr2L 9394992 intron Shawl - chr2L 9396488 intron Shawl - chr2L_8_9390001 chr2L_9390001 RAL-810 171 chr2L 9421018 9421026 chr2L 9421162 9421170 4 144 0.0 4.0 2.0 1.3 152 chr2L 9421018 intron Mco1 + chr2L 9421094 intron Mco1 + chr2L 9421170 intron Mco1 + chr2L_4_9420001 chr2L_9420001 RAL-810 172 chr2L 9441322 9441355 chr2L 9441426 9441459 12 103 2.5 3.0 2.8 3.2 137 chr2L 9441322 intron numb + chr2L 9441390 intron numb + chr2L 9441459 intron numb + chr2L_12_9440001 chr2L_9440001 RAL-810 173 chr2L 9454977 9454993 chr2L 9455079 9455095 4 102 2.5 1.0 1.8 1.4 118 chr2L 9454977 intron numb + chr2L 9455036 intron numb + chr2L 9455095 intron numb + chr2L_4_9455001 chr2L_9455001 RAL-810 174 chr2L 9456931 9456961 chr2L 9457012 9457042 12 81 2.5 4.5 3.5 2.7 111 chr2L 9456931 intron numb + chr2L 9456986 intron numb + chr2L 9457042 intron numb + chr2L_12_9455001 chr2L_9455001 RAL-810 175 chr2L 9474782 9474810 chr2L 9474876 9474904 9 94 0.5 3.0 1.8 3.2 122 chr2L 9474782 intergenic not near genes chr2L 9474843 intergenic not near genes chr2L 9474904 intergenic not near genes chr2L_9_9470001 chr2L_9470001 RAL-810 176 chr2L 9490522 9490550 chr2L 9490602 9490630 8 78 1.5 3.5 2.5 2.3 108 chr2L 9490522 intergenic not near genes chr2L 9490576 intergenic not near genes chr2L 9490630 intergenic not near genes chr2L_8_9490001 chr2L_9490001 RAL-810 177 chr2L 9533869 9533884 chr2L 9533957 9533972 6 88 1.0 2.5 1.8 2.1 103 chr2L 9533869 intron Oatp30B + chr2L 9533920 intron Oatp30B + chr2L 9533972 intron Oatp30B + chr2L_6_9530001 chr2L_9530001 RAL-810 178 chr2L 9619504 9619522 chr2L 9619841 9619858 4 337 1.0 3.0 2.0 1.3 354 chr2L 9619504 intron GlcAT-S + chr2L 9619681 intron GlcAT-S + chr2L 9619858 intron GlcAT-S + chr2L_4_9615001 chr2L_9615001 RAL-810 179 chr2L 9716447 9716484 chr2L 9716535 9716572 7 88 5.0 2.0 3.5 1.6 125 chr2L 9716447 3` UTR Nckx30C - chr2L 9716510 3` UTR Nckx30C - chr2L 9716572 3` UTR Nckx30C - chr2L_7_9715001 chr2L_9715001 RAL-810 180 chr2L 9730985 9731004 chr2L 9731059 9731084 7 81 4.5 3.5 4.0 1.4 99 chr2L 9730985 intron Nckx30C - chr2L 9731034 intron Nckx30C - chr2L 9731084 intron Nckx30C - chr2L_7_9730001 chr2L_9730001 RAL-810 181 chr2L 9881005 9881030 chr2L 9881083 9881108 7 78 4.5 5.0 4.8 1.2 103 chr2L 9881005 intron nAChRalpha6 - chr2L 9881056 intron nAChRalpha6 - chr2L 9881108 intron nAChRalpha6 - chr2L_7_9880001 chr2L_9880001 RAL-810 182 chr2L 9892507 9892530 chr2L 9892583 9892606 9 76 4.0 3.0 3.5 2.0 99 chr2L 9892507 intron mtDNA-helicase - chr2L 9892556 intron mtDNA-helicase - chr2L 9892606 intron mtDNA-helicase - chr2L_9_9890001 chr2L_9890001 RAL-810 183 chr2L 9943365 9943385 chr2L 9943430 9943465 13 78 0.0 3.5 1.8 4.6 100 chr2L 9943365 intron CG5853 - chr2L 9943415 intron CG5853 - chr2L 9943465 intron CG5853 - chr2L_13_9940001 chr2L_9940001 RAL-810 184 chr2L 9973726 9973756 chr2L 9980845 9980875 HMS-Beagle 4 7119 2.0 3.5 2.8 1.1 7149 chr2L 9973726 intergenic not near genes chr2L 9977300 intergenic not near genes chr2L 9980875 intergenic not near genes chr2L_4_9975001 chr2L_9975001 RAL-810 185 chr2L 9986359 9986376 chr2L 9986449 9986457 6 89 0.5 3.0 1.8 2.1 98 chr2L 9986359 intron bib + chr2L 9986408 intron bib + chr2L 9986457 intron bib + chr2L_6_9985001 chr2L_9985001 RAL-810 186 chr2L 10105279 10105313 chr2L 10105355 10105389 9 75 2.5 5.0 3.8 1.9 110 chr2L 10105279 intron,intron CG44153 -,CG34109 + chr2L 10105334 intron,intron CG44153 -,CG34109 + chr2L 10105389 intron,intron CG44153 -,CG34109 + chr2L_9_10105001 chr2L_10105001 RAL-810 187 chr2L 10136240 10136260 chr2L 10136321 10136323 5 78 1.0 0.0 0.5 3.3 83 chr2L 10136240 intron CG44153 - chr2L 10136282 intron CG44153 - chr2L 10136323 intron CG44153 - chr2L_5_10135001 chr2L_10135001 RAL-810 188 chr2L 10156322 10156353 chr2L 10163792 10163821 blood 8 7469 3.0 5.0 4.0 1.6 7499 chr2L 10156322 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163821 intron CG44153 - chr2L_8_10160001 chr2L_10160001 RAL-810 189 chr2L 10176541 10176570 chr2L 10176824 10176853 10 283 2.0 2.5 2.2 3.1 312 chr2L 10176541 intron CG44153 - chr2L 10176697 intron CG44153 - chr2L 10176853 intron CG44153 - chr2L_10_10175001 chr2L_10175001 RAL-810 190 chr2L 10180584 10180606 chr2L 10180671 10180675 8 84 0.0 0.0 0.0 8.0 91 chr2L 10180584 intergenic CG44153 - chr2L 10180630 intergenic CG44153 - chr2L 10180675 intergenic CG44153 - chr2L_8_10180001 chr2L_10180001 RAL-810 191 chr2L 10191458 10191490 chr2L 10191541 10191573 5 83 1.5 4.0 2.8 1.3 115 chr2L 10191458 intron,5` UTR Sur -,CG31874 - chr2L 10191516 intron Sur - chr2L 10191573 intron Sur - chr2L_5_10190001 chr2L_10190001 RAL-810 192 chr2L 10262565 10262574 chr2L 10262665 10262673 6 100 4.0 4.0 4.0 1.2 108 chr2L 10262565 3` UTR Rsf1 - chr2L 10262619 3` UTR Rsf1 - chr2L 10262673 3` UTR Rsf1 - chr2L_6_10260001 chr2L_10260001 RAL-810 193 chr2L 10294177 10294197 chr2L 10294253 10294273 7 76 2.0 0.0 1.0 3.5 96 chr2L 10294177 intron Hand - chr2L 10294225 intron Hand - chr2L 10294273 intron Hand - chr2L_7_10290001 chr2L_10290001 RAL-810 194 chr2L 10490282 10490305 chr2L 10490364 10490387 6 81 3.5 1.5 2.5 1.7 105 chr2L 10490282 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490334 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490387 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_6_10490001 chr2L_10490001 RAL-810 195 chr2L 10524871 10524885 chr2L 10524979 10524993 4 108 0.0 0.0 0.0 4.0 122 chr2L 10524871 intergenic not near genes chr2L 10524932 intergenic not near genes chr2L 10524993 intergenic not near genes chr2L_4_10520001 chr2L_10520001 RAL-810 196 chr2L 10592842 10592874 chr2L 10600504 10600536 opus 9 7662 2.5 1.5 2.0 3.0 7694 chr2L 10592842 intron Trim9 + chr2L 10596689 intron Trim9 + chr2L 10600536 intron Trim9 + chr2L_9_10595001 chr2L_10595001 RAL-810 197 chr2L 10688547 10688568 chr2L 10688623 10688644 7 76 3.0 1.5 2.2 2.2 97 chr2L 10688547 intergenic CG7294 - chr2L 10688596 intergenic CG7294 - chr2L 10688644 intergenic CG7294 - chr2L_7_10685001 chr2L_10685001 RAL-810 198 chr2L 10698134 10698152 chr2L 10698217 10698235 5 83 3.5 2.5 3.0 1.2 101 chr2L 10698134 5` UTR CR44181 + chr2L 10698184 5` UTR CR44181 + chr2L 10698235 intergenic CR44181 +,CG7300 - chr2L_5_10695001 chr2L_10695001 RAL-810 199 chr2L 10704916 10704926 chr2L 10705011 10705021 5 95 1.5 0.0 0.8 2.8 105 chr2L 10704916 intron,3` UTR Lip2 -,CG6415 + chr2L 10704968 intron Lip2 - chr2L 10705021 intron Lip2 - chr2L_5_10700001 chr2L_10700001 RAL-810 200 chr2L 10723539 10723552 chr2L 10723633 10723646 6 94 1.5 1.5 1.5 2.4 107 chr2L 10723539 intergenic not near genes chr2L 10723592 intergenic not near genes chr2L 10723646 intergenic not near genes chr2L_6_10720001 chr2L_10720001 RAL-810 201 chr2L 10803790 10803804 chr2L 10803875 10803890 7 86 1.0 6.0 3.5 1.6 100 chr2L 10803790 intergenic Nos - chr2L 10803840 intergenic Nos - chr2L 10803890 intergenic Nos - chr2L_7_10800001 chr2L_10800001 RAL-810 202 chr2L 10812060 10812076 chr2L 10812154 10812170 5 94 0.0 2.5 1.2 2.3 110 chr2L 10812060 intron Nos - chr2L 10812115 intron Nos - chr2L 10812170 intron Nos - chr2L_5_10810001 chr2L_10810001 RAL-810 203 chr2L 10946949 10946973 chr2L 10956161 10956188 roo 7 9214 1.5 2.0 1.8 2.5 9239 chr2L 10946949 intron dpr2 - chr2L 10951568 intron dpr2 - chr2L 10956188 intron dpr2 - chr2L_7_10950001 chr2L_10950001 RAL-810 204 chr2L 11130495 11130529 chr2L 11130585 11130619 11 90 1.5 5.5 3.5 2.4 124 chr2L 11130495 5` UTR RfC38 - chr2L 11130557 5` UTR RfC38 - chr2L 11130619 5` UTR RfC38 - chr2L_11_11130001 chr2L_11130001 RAL-810 205 chr2L 11169475 11169503 chr2L 11169610 11169638 7 134 4.5 2.0 3.2 1.7 163 chr2L 11169475 intron Ca-beta - chr2L 11169556 intron Ca-beta - chr2L 11169638 intron Ca-beta - chr2L_7_11165001 chr2L_11165001 RAL-810 206 chr2L 11182283 11182292 chr2L 11182393 11182402 4 110 1.5 2.5 2.0 1.3 119 chr2L 11182283 intron Ca-beta - chr2L 11182342 intron Ca-beta - chr2L 11182402 intron Ca-beta - chr2L_4_11180001 chr2L_11180001 RAL-810 207 chr2L 11292375 11292402 chr2L 11292457 11292484 5 82 2.5 3.5 3.0 1.2 109 chr2L 11292375 intergenic not near genes chr2L 11292430 intergenic not near genes chr2L 11292484 intergenic not near genes chr2L_5_11290001 chr2L_11290001 RAL-810 208 chr2L 11298821 11298853 chr2L 11298898 11298930 7 77 1.5 2.5 2.0 2.3 109 chr2L 11298821 intergenic not near genes chr2L 11298876 intergenic not near genes chr2L 11298930 intergenic not near genes chr2L_7_11295001 chr2L_11295001 RAL-810 209 chr2L 11313110 11313125 chr2L 11313189 11313197 4 77 2.5 3.5 3.0 1.0 87 chr2L 11313110 intergenic not near genes chr2L 11313154 intergenic not near genes chr2L 11313197 intergenic not near genes chr2L_4_11310001 chr2L_11310001 RAL-810 210 chr2L 11450120 11450155 chr2L 11450206 11450237 9 82 0.0 3.0 1.5 3.6 117 chr2L 11450120 intergenic not near genes chr2L 11450178 intergenic not near genes chr2L 11450237 intergenic not near genes chr2L_9_11450001 chr2L_11450001 RAL-810 211 chr2L 11563636 11563656 chr2L 11568840 11568860 copia 4 5203 3.0 3.0 3.0 1.0 5224 chr2L 11563636 intergenic not near genes chr2L 11566248 intergenic not near genes chr2L 11568860 intergenic not near genes chr2L_4_11565001 chr2L_11565001 RAL-810 212 chr2L 11563658 11563668 chr2L 11568838 11568872 copia 5 5199 2.0 3.0 2.5 1.4 5214 chr2L 11563658 intergenic not near genes chr2L 11566265 intergenic not near genes chr2L 11568872 intergenic not near genes chr2L_5_11565001 chr2L_11565001 RAL-810 213 chr2L 11713510 11713540 chr2L 11720978 11721008 blood 8 7468 2.0 3.0 2.5 2.3 7498 chr2L 11713510 intergenic not near genes chr2L 11717259 intergenic not near genes chr2L 11721008 intergenic CR44143 + chr2L_8_11715001 chr2L_11715001 RAL-810 214 chr2L 11750331 11750339 chr2L 11750617 11750625 4 286 2.0 3.0 2.5 1.1 294 chr2L 11750331 intergenic not near genes chr2L 11750478 intergenic not near genes chr2L 11750625 intergenic not near genes chr2L_4_11750001 chr2L_11750001 RAL-810 215 chr2L 11769929 11769967 chr2L 11770005 11770043 13 76 2.0 1.0 1.5 5.2 114 chr2L 11769929 intergenic not near genes chr2L 11769986 intergenic not near genes chr2L 11770043 intergenic not near genes chr2L_13_11765001 chr2L_11765001 RAL-810 216 chr2L 11826937 11826971 chr2L 11827015 11827047 9 78 1.5 4.0 2.8 2.4 110 chr2L 11826937 intron Pde1c - chr2L 11826992 intron Pde1c - chr2L 11827047 intron Pde1c - chr2L_9_11825001 chr2L_11825001 RAL-810 217 chr2L 11841346 11841367 chr2L 11841443 11841464 5 96 2.0 0.0 1.0 2.5 118 chr2L 11841346 intron Pde1c - chr2L 11841405 intron Pde1c - chr2L 11841464 intron Pde1c - chr2L_5_11840001 chr2L_11840001 RAL-810 218 chr2L 11867006 11867012 chr2L 11867118 11867123 4 112 2.5 0.5 1.5 1.6 117 chr2L 11867006 intron Pde1c - chr2L 11867064 intron Pde1c - chr2L 11867123 intron Pde1c - chr2L_4_11865001 chr2L_11865001 RAL-810 219 chr2L 12016860 12016879 chr2L 12016937 12016962 5 83 2.5 2.5 2.5 1.4 102 chr2L 12016860 exon CG6734 - chr2L 12016911 exon CG6734 - chr2L 12016962 exon CG6734 - chr2L_5_12015001 chr2L_12015001 RAL-810 220 chr2L 12031388 12031419 chr2L 12031469 12031500 8 81 1.5 3.5 2.5 2.3 112 chr2L 12031388 intron dmGlut + chr2L 12031444 intron dmGlut + chr2L 12031500 intron dmGlut + chr2L_8_12030001 chr2L_12030001 RAL-810 221 chr2L 12067328 12067363 chr2L 12074380 12074415 297 13 7052 2.5 1.5 2.0 4.3 7087 chr2L 12067328 intergenic not near genes chr2L 12070872 intergenic not near genes chr2L 12074415 intergenic not near genes chr2L_13_12070001 chr2L_12070001 RAL-810 222 chr2L 12305411 12305438 chr2L 12305499 12305526 6 88 3.0 2.5 2.8 1.6 115 chr2L 12305411 intron aret + chr2L 12305468 intron aret + chr2L 12305526 intron aret + chr2L_6_12305001 chr2L_12305001 RAL-810 223 chr2L 12365776 12365802 chr2L 12365930 12365956 7 154 1.5 1.5 1.5 2.8 180 chr2L 12365776 intron bru-2 + chr2L 12365866 intron bru-2 + chr2L 12365956 intron bru-2 + chr2L_7_12365001 chr2L_12365001 RAL-810 224 chr2L 12487884 12487920 chr2L 12487965 12488001 9 81 2.0 2.5 2.2 2.8 117 chr2L 12487884 intron bun - chr2L 12487942 intron bun - chr2L 12488001 intron bun - chr2L_9_12485001 chr2L_12485001 RAL-810 225 chr2L 12518538 12518566 chr2L 12518797 12518825 6 259 1.0 1.0 1.0 3.0 287 chr2L 12518538 intron bun - chr2L 12518682 intron bun - chr2L 12518825 intron bun - chr2L_6_12515001 chr2L_12515001 RAL-810 226 chr2L 12643169 12643185 chr2L 12643246 12643262 4 77 1.0 1.5 1.2 1.8 93 chr2L 12643169 intron Ref2 - chr2L 12643216 intron Ref2 - chr2L 12643262 intron Ref2 - chr2L_4_12640001 chr2L_12640001 RAL-810 227 chr2L 12731057 12731090 chr2L 12735824 12735857 F-element 11 4767 3.5 4.0 3.8 2.3 4800 chr2L 12731057 intron MRP + chr2L 12733457 intron MRP + chr2L 12735857 intron MRP + chr2L_11_12730001 chr2L_12730001 RAL-810 228 chr2L 12736673 12736694 chr2L 12736745 12736770 6 75 4.0 2.0 3.0 1.5 97 chr2L 12736673 intron MRP + chr2L 12736722 intron MRP + chr2L 12736770 intron MRP + chr2L_6_12735001 chr2L_12735001 RAL-810 229 chr2L 12739174 12739207 chr2L 12743955 12743966 Doc 7 4778 1.0 4.0 2.5 2.0 4792 chr2L 12739174 exon MRP + chr2L 12741570 intron MRP + chr2L 12743966 intron MRP + chr2L_7_12740001 chr2L_12740001 RAL-810 230 chr2L 12791624 12791633 chr2L 12795277 12795291 F-element 10 3663 3.5 3.0 3.2 2.4 3667 chr2L 12791624 intergenic not near genes chr2L 12793458 intergenic not near genes chr2L 12795291 intergenic not near genes chr2L_10_12790001 chr2L_12790001 RAL-810 231 chr2L 12815374 12815391 chr2L 12815509 12815525 8 135 2.0 3.0 2.5 2.3 151 chr2L 12815374 intergenic not near genes chr2L 12815450 intergenic not near genes chr2L 12815525 intergenic not near genes chr2L_8_12815001 chr2L_12815001 RAL-810 232 chr2L 12844364 12844383 chr2L 12844660 12844679 6 294 1.5 2.0 1.8 2.1 315 chr2L 12844364 intergenic not near genes chr2L 12844522 intergenic not near genes chr2L 12844679 intergenic not near genes chr2L_6_12840001 chr2L_12840001 RAL-810 233 chr2L 12861698 12861728 chr2L 12863162 12863195 hobo 5 1466 1.0 1.0 1.0 2.5 1497 chr2L 12861698 intergenic not near genes chr2L 12862446 intergenic not near genes chr2L 12863195 intergenic not near genes chr2L_5_12860001 chr2L_12860001 RAL-810 234 chr2L 12898860 12898886 chr2L 12898941 12898971 7 84 0.0 5.0 2.5 2.0 111 chr2L 12898860 intergenic not near genes chr2L 12898916 intergenic not near genes chr2L 12898971 intergenic not near genes chr2L_7_12895001 chr2L_12895001 RAL-810 235 chr2L 12905475 12905492 chr2L 12905559 12905576 8 84 3.5 1.0 2.2 2.5 101 chr2L 12905475 intergenic not near genes chr2L 12905526 intergenic not near genes chr2L 12905576 intergenic not near genes chr2L_8_12905001 chr2L_12905001 RAL-810 236 chr2L 12933848 12933883 chr2L 12941315 12941350 blood 8 7464 3.5 3.0 3.2 1.9 7502 chr2L 12933848 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941350 intergenic not near genes chr2L_8_12935001 chr2L_12935001 RAL-810 237 chr2L 12946792 12946796 chr2L 12946884 12946888 4 92 0.0 0.0 0.0 4.0 96 chr2L 12946792 intergenic not near genes chr2L 12946840 intergenic not near genes chr2L 12946888 intergenic not near genes chr2L_4_12945001 chr2L_12945001 RAL-810 238 chr2L 13036241 13036273 chr2L 13036483 13036515 X-element 9 242 6.5 0.0 3.2 2.1 274 chr2L 13036241 intron CG9932 - chr2L 13036378 intron CG9932 - chr2L 13036515 intron CG9932 - chr2L_9_13035001 chr2L_13035001 RAL-810 239 chr2L 13147745 13147775 chr2L 13147821 13147851 9 76 1.5 1.5 1.5 3.6 106 chr2L 13147745 intergenic not near genes chr2L 13147798 intergenic not near genes chr2L 13147851 intergenic not near genes chr2L_9_13145001 chr2L_13145001 RAL-810 240 chr2L 13152237 13152253 chr2L 13152315 13152331 8 78 2.5 3.5 3.0 2.0 94 chr2L 13152237 intergenic not near genes chr2L 13152284 intergenic not near genes chr2L 13152331 intergenic not near genes chr2L_8_13150001 chr2L_13150001 RAL-810 241 chr2L 13154110 13154125 chr2L 13154188 13154203 6 78 1.5 3.5 2.5 1.7 93 chr2L 13154110 intergenic not near genes chr2L 13154156 intergenic not near genes chr2L 13154203 intergenic not near genes chr2L_6_13150001 chr2L_13150001 RAL-810 242 chr2L 13155183 13155195 chr2L 13155503 13155515 5 320 0.0 4.5 2.2 1.6 332 chr2L 13155183 intergenic not near genes chr2L 13155349 intergenic not near genes chr2L 13155515 intergenic not near genes chr2L_5_13155001 chr2L_13155001 RAL-810 243 chr2L 13241958 13241970 chr2L 13244342 13244354 BS 6 2384 1.5 0.0 0.8 3.3 2396 chr2L 13241958 5` UTR CR45330 + chr2L 13243156 intron CR45330 + chr2L 13244354 5` UTR CR45330 + chr2L_6_13240001 chr2L_13240001 RAL-810 244 chr2L 13374326 13374336 chr2L 13374411 13374419 5 85 2.5 0.0 1.2 2.3 93 chr2L 13374326 5` UTR CG6565 + chr2L 13374372 5` UTR CG6565 + chr2L 13374419 5` UTR CG6565 + chr2L_5_13370001 chr2L_13370001 RAL-810 245 chr2L 13405650 13405680 chr2L 13410445 13410477 Doc 11 4796 1.5 3.0 2.2 3.4 4827 chr2L 13405650 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410477 intron CG7110 + chr2L_11_13405001 chr2L_13405001 RAL-810 246 chr2L 13421121 13421153 chr2L 13421199 13421229 8 77 0.0 2.5 1.2 3.6 108 chr2L 13421121 intron CG42784 + chr2L 13421175 intron CG42784 + chr2L 13421229 intron CG42784 + chr2L_8_13420001 chr2L_13420001 RAL-810 247 chr2L 13422488 13422505 chr2L 13422567 13422584 5 79 0.0 5.5 2.8 1.3 96 chr2L 13422488 intron CG42784 + chr2L 13422536 intron CG42784 + chr2L 13422584 intron CG42784 + chr2L_5_13420001 chr2L_13420001 RAL-810 248 chr2L 13449467 13449496 chr2L 13456903 13456932 Quasimodo 11 7436 2.5 5.0 3.8 2.3 7465 chr2L 13449467 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453200 intron CG42784 + chr2L 13456932 intron CG42784 + chr2L_11_13450001 chr2L_13450001 RAL-810 249 chr2L 13481451 13481456 chr2L 13482058 13482063 jockey 4 607 3.0 5.0 4.0 0.8 612 chr2L 13481451 intron CG42784 + chr2L 13481757 intron CG42784 + chr2L 13482063 intron CG42784 + chr2L_4_13480001 chr2L_13480001 RAL-810 250 chr2L 13481461 13481474 chr2L 13482056 13482081 jockey 8 605 1.0 5.0 3.0 2.0 620 chr2L 13481461 intron CG42784 + chr2L 13481771 intron CG42784 + chr2L 13482081 intron CG42784 + chr2L_8_13480001 chr2L_13480001 RAL-810 251 chr2L 13587321 13587331 chr2L 13588389 13588406 5 1073 6.5 4.5 5.5 0.8 1085 chr2L 13587321 intron kuz + chr2L 13587864 intron kuz + chr2L 13588406 intron kuz + chr2L_5_13585001 chr2L_13585001 RAL-810 252 chr2L 13618047 13618075 chr2L 13618136 13618164 13 90 1.0 4.5 2.8 3.4 117 chr2L 13618047 intron kuz + chr2L 13618106 intron kuz + chr2L 13618164 intron kuz + chr2L_13_13615001 chr2L_13615001 RAL-810 253 chr2L 13692157 13692189 chr2L 13692233 13692265 12 74 1.5 1.5 1.5 4.8 108 chr2L 13692157 intron CG31814 - chr2L 13692211 intron CG31814 - chr2L 13692265 intron CG31814 - chr2L_12_13690001 chr2L_13690001 RAL-810 254 chr2L 13761798 13761834 chr2L 13762908 13762945 Doc 12 1110 4.5 2.0 3.2 2.9 1147 chr2L 13761798 intron TM9SF4 + chr2L 13762372 intron TM9SF4 + chr2L 13762945 intron TM9SF4 + chr2L_12_13760001 chr2L_13760001 RAL-810 255 chr2L 13800176 13800201 chr2L 13800280 13800305 6 104 3.5 3.5 3.5 1.3 129 chr2L 13800176 intergenic not near genes chr2L 13800240 intergenic not near genes chr2L 13800305 intergenic not near genes chr2L_6_13800001 chr2L_13800001 RAL-810 256 chr2L 13804374 13804390 chr2L 13804523 13804536 6 148 3.5 1.5 2.5 1.7 162 chr2L 13804374 intron CAH1 + chr2L 13804455 intron CAH1 + chr2L 13804536 intron CAH1 + chr2L_6_13800001 chr2L_13800001 RAL-810 257 chr2L 13842133 13842164 chr2L 13842217 13842248 7 84 2.0 2.0 2.0 2.3 115 chr2L 13842133 intron CenG1A + chr2L 13842190 intron CenG1A + chr2L 13842248 intron CenG1A + chr2L_7_13840001 chr2L_13840001 RAL-810 258 chr2L 13842577 13842593 chr2L 13842654 13842670 8 77 3.5 3.5 3.5 1.8 93 chr2L 13842577 intron CenG1A + chr2L 13842624 intron CenG1A + chr2L 13842670 intron CenG1A + chr2L_8_13840001 chr2L_13840001 RAL-810 259 chr2L 13853086 13853116 chr2L 13862236 13862266 roo 5 9150 3.5 3.5 3.5 1.1 9180 chr2L 13853086 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862266 intron CenG1A + chr2L_5_13855001 chr2L_13855001 RAL-810 260 chr2L 13987219 13987237 chr2L 13987298 13987318 5 79 2.0 5.0 3.5 1.1 99 chr2L 13987219 intron rk - chr2L 13987268 intron rk - chr2L 13987318 intron rk - chr2L_5_13985001 chr2L_13985001 RAL-810 261 chr2L 14064455 14064483 chr2L 14064531 14064560 10 73 0.5 2.0 1.2 4.5 105 chr2L 14064455 intron nAChRalpha5 + chr2L 14064508 intron nAChRalpha5 + chr2L 14064560 intron nAChRalpha5 + chr2L_10_14060001 chr2L_14060001 RAL-810 262 chr2L 14068605 14068629 chr2L 14068683 14068709 8 76 1.5 1.0 1.2 3.6 104 chr2L 14068605 intron nAChRalpha5 + chr2L 14068657 intron nAChRalpha5 + chr2L 14068709 intron nAChRalpha5 + chr2L_8_14065001 chr2L_14065001 RAL-810 263 chr2L 14096164 14096172 chr2L 14096256 14096262 6 92 2.5 0.0 1.2 2.7 98 chr2L 14096164 intergenic not near genes chr2L 14096213 intergenic not near genes chr2L 14096262 intergenic not near genes chr2L_6_14095001 chr2L_14095001 RAL-810 264 chr2L 14246288 14246315 chr2L 14246366 14246393 10 78 0.0 0.0 0.0 10.0 105 chr2L 14246288 intergenic not near genes chr2L 14246340 intergenic not near genes chr2L 14246393 intergenic not near genes chr2L_10_14245001 chr2L_14245001 RAL-810 265 chr2L 14396198 14396229 chr2L 14398954 14398985 7 2756 15.5 13.5 14.5 0.5 2787 chr2L 14396198 intron elB - chr2L 14397592 intron elB - chr2L 14398985 intron elB - chr2L_7_14395001 chr2L_14395001 RAL-810 266 chr2L 14396031 14396060 chr2L 14399140 14399169 10 3111 15.0 21.5 18.2 0.5 3138 chr2L 14396031 intron elB - chr2L 14397600 intron elB - chr2L 14399169 intron elB - chr2L_10_14395001 chr2L_14395001 RAL-810 267 chr2L 14494099 14494123 chr2L 14494456 14494487 7 363 2.0 3.0 2.5 2.0 388 chr2L 14494099 intergenic noc + chr2L 14494293 intergenic noc + chr2L 14494487 intergenic noc + chr2L_7_14490001 chr2L_14490001 RAL-810 268 chr2L 14557247 14557272 chr2L 14557341 14557368 9 95 1.5 3.5 2.5 2.6 121 chr2L 14557247 intergenic not near genes chr2L 14557308 intergenic not near genes chr2L 14557368 intergenic not near genes chr2L_9_14555001 chr2L_14555001 RAL-810 269 chr2L 14588384 14588416 chr2L 14588538 14588568 9 154 3.5 2.5 3.0 2.2 184 chr2L 14588384 intergenic CG42680 - chr2L 14588476 intergenic CG42680 - chr2L 14588568 intergenic CG42680 - chr2L_9_14585001 chr2L_14585001 RAL-810 270 chr2L 14601981 14601996 chr2L 14602065 14602080 8 83 2.5 1.5 2.0 2.7 99 chr2L 14601981 exon osp - chr2L 14602030 intron osp - chr2L 14602080 intron osp - chr2L_8_14600001 chr2L_14600001 RAL-810 271 chr2L 14614078 14614083 chr2L 14614370 14614376 4 293 13.5 9.5 11.5 0.3 298 chr2L 14614078 intron osp - chr2L 14614227 intron osp - chr2L 14614376 intron osp - chr2L_4_14610001 chr2L_14610001 RAL-810 272 chr2L 14614074 14614089 chr2L 14614286 14614301 8 212 13.0 8.0 10.5 0.7 227 chr2L 14614074 intron osp - chr2L 14614188 intron osp - chr2L 14614301 intron osp - chr2L_8_14610001 chr2L_14610001 RAL-810 273 chr2L 14707219 14707240 chr2L 14707338 14707359 6 119 2.5 3.0 2.8 1.6 140 chr2L 14707219 intergenic not near genes chr2L 14707289 intergenic not near genes chr2L 14707359 intergenic not near genes chr2L_6_14705001 chr2L_14705001 RAL-810 274 chr2L 14768933 14768954 chr2L 14769010 14769032 8 78 0.5 2.0 1.2 3.6 99 chr2L 14768933 intergenic not near genes chr2L 14768982 intergenic not near genes chr2L 14769032 intergenic not near genes chr2L_8_14765001 chr2L_14765001 RAL-810 275 chr2L 14769361 14769382 chr2L 14769520 14769541 9 159 2.0 2.5 2.2 2.8 180 chr2L 14769361 intergenic not near genes chr2L 14769451 intergenic not near genes chr2L 14769541 intergenic not near genes chr2L_9_14765001 chr2L_14765001 RAL-810 276 chr2L 14778335 14778335 chr2L 15815888 15815888 4 1037553 11.5 13.0 12.2 0.3 1037553 chr2L 14778335 intergenic not near genes chr2L 15297112 3` UTR CR43764 - chr2L 15815888 intergenic not near genes chr2L_4_15295001 chr2L_15295001 RAL-810 277 chr2L 15013173 15013178 chr2L 15013282 15013287 4 109 0.0 7.5 3.8 0.8 114 chr2L 15013173 intergenic not near genes chr2L 15013230 intergenic not near genes chr2L 15013287 intergenic not near genes chr2L_4_15010001 chr2L_15010001 RAL-810 278 chr2L 15021442 15021471 chr2L 15021518 15021547 9 76 4.0 2.0 3.0 2.2 105 chr2L 15021442 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021547 intron GABA-B-R1 + chr2L_9_15020001 chr2L_15020001 RAL-810 279 chr2L 15026021 15026050 chr2L 15026101 15026131 13 81 0.5 2.5 1.5 5.2 110 chr2L 15026021 exon GABA-B-R1 + chr2L 15026076 intron GABA-B-R1 + chr2L 15026131 intron GABA-B-R1 + chr2L_13_15025001 chr2L_15025001 RAL-810 280 chr2L 15044710 15044745 chr2L 15044786 15044821 14 76 4.0 0.5 2.2 4.4 111 chr2L 15044710 intergenic ck - chr2L 15044766 intergenic ck - chr2L 15044821 intergenic ck - chr2L_14_15040001 chr2L_15040001 RAL-810 281 chr2L 15078081 15078102 chr2L 15078169 15078190 11 87 2.0 5.0 3.5 2.4 109 chr2L 15078081 intron CG15270 + chr2L 15078136 intron CG15270 + chr2L 15078190 intron CG15270 + chr2L_11_15075001 chr2L_15075001 RAL-810 282 chr2L 15080904 15080909 chr2L 15080997 15081002 5 93 4.5 0.0 2.2 1.6 98 chr2L 15080904 intron CG15270 + chr2L 15080953 intron CG15270 + chr2L 15081002 intron CG15270 + chr2L_5_15080001 chr2L_15080001 RAL-810 283 chr2L 15122796 15122809 chr2L 15122876 15122888 6 80 0.0 4.0 2.0 2.0 92 chr2L 15122796 intergenic not near genes chr2L 15122842 intergenic not near genes chr2L 15122888 intergenic not near genes chr2L_6_15120001 chr2L_15120001 RAL-810 284 chr2L 15226368 15226396 chr2L 15226444 15226464 10 74 0.5 2.0 1.2 4.5 96 chr2L 15226368 intergenic not near genes chr2L 15226416 intergenic not near genes chr2L 15226464 intergenic not near genes chr2L_10_15225001 chr2L_15225001 RAL-810 285 chr2L 15252984 15253006 chr2L 15253062 15253085 7 79 2.0 3.5 2.8 1.8 101 chr2L 15252984 intron dao + chr2L 15253034 intron dao + chr2L 15253085 intron dao + chr2L_7_15250001 chr2L_15250001 RAL-810 286 chr2L 15343541 15343565 chr2L 15343626 15343650 7 85 3.0 0.0 1.5 2.8 109 chr2L 15343541 intergenic not near genes chr2L 15343596 intergenic not near genes chr2L 15343650 intergenic not near genes chr2L_7_15340001 chr2L_15340001 RAL-810 287 chr2L 15371600 15371621 chr2L 15371817 15371839 6 218 3.5 3.5 3.5 1.3 239 chr2L 15371600 intergenic not near genes chr2L 15371720 intergenic not near genes chr2L 15371839 intergenic not near genes chr2L_6_15370001 chr2L_15370001 RAL-810 288 chr2L 15375819 15375843 chr2L 15375931 15375954 8 112 2.5 3.0 2.8 2.1 135 chr2L 15375819 intergenic not near genes chr2L 15375886 intergenic not near genes chr2L 15375954 intergenic not near genes chr2L_8_15375001 chr2L_15375001 RAL-810 289 chr2L 15446051 15446068 chr2L 15453520 15453537 blood 5 7468 4.0 3.0 3.5 1.1 7486 chr2L 15446051 intergenic not near genes chr2L 15449794 intergenic not near genes chr2L 15453537 intergenic not near genes chr2L_5_15445001 chr2L_15445001 RAL-810 290 chr2L 15510934 15510963 chr2L 15511028 15511056 4 94 1.0 2.0 1.5 1.6 122 chr2L 15510934 intergenic not near genes chr2L 15510995 intergenic not near genes chr2L 15511056 intergenic not near genes chr2L_4_15510001 chr2L_15510001 RAL-810 291 chr2L 15526032 15526047 chr2L 15526267 15526279 5 234 2.0 4.5 3.2 1.2 247 chr2L 15526032 intergenic not near genes chr2L 15526156 intergenic not near genes chr2L 15526279 intergenic not near genes chr2L_5_15525001 chr2L_15525001 RAL-810 292 chr2L 15586409 15586436 chr2L 15593461 15593486 297 14 7052 4.5 2.5 3.5 3.1 7077 chr2L 15586409 intergenic not near genes chr2L 15589948 intergenic not near genes chr2L 15593486 intergenic not near genes chr2L_14_15585001 chr2L_15585001 RAL-810 293 chr2L 15740679 15740709 chr2L 15740766 15740797 8 88 0.0 2.5 1.2 3.6 118 chr2L 15740679 intron CycE - chr2L 15740738 intron CycE - chr2L 15740797 5` UTR CycE - chr2L_8_15740001 chr2L_15740001 RAL-810 294 chr2L 15806174 15806190 chr2L 15807166 15807182 6 992 7.5 16.5 12.0 0.5 1008 chr2L 15806174 intergenic not near genes chr2L 15806678 intergenic not near genes chr2L 15807182 3` UTR CR44602 - chr2L_6_15805001 chr2L_15805001 RAL-810 295 chr2L 15823357 15823370 chr2L 15823432 15823446 4 76 2.5 5.0 3.8 0.8 89 chr2L 15823357 intergenic CR44601 - chr2L 15823402 intergenic CR44601 - chr2L 15823446 intergenic not near genes chr2L_4_15820001 chr2L_15820001 RAL-810 296 chr2L 15933572 15933605 chr2L 15936109 15936143 9 2534 8.0 16.0 12.0 0.7 2571 chr2L 15933572 intron beat-Ib - chr2L 15934858 intron beat-Ib - chr2L 15936143 intron beat-Ib - chr2L_9_15930001 chr2L_15930001 RAL-810 297 chr2L 15933217 15933245 chr2L 15936122 15936150 5 2905 25.0 14.5 19.8 0.2 2933 chr2L 15933217 intron beat-Ib - chr2L 15934684 intron beat-Ib - chr2L 15936150 intron beat-Ib - chr2L_5_15930001 chr2L_15930001 RAL-810 298 chr2L 15956024 15956049 chr2L 15957491 15957516 hobo 7 1466 4.0 2.0 3.0 1.8 1492 chr2L 15956024 intron beat-Ib - chr2L 15956770 intron beat-Ib - chr2L 15957516 intron beat-Ib - chr2L_7_15955001 chr2L_15955001 RAL-810 299 chr2L 16017649 16017669 chr2L 16017725 16017744 8 74 0.0 1.5 0.8 4.4 95 chr2L 16017649 intron beat-Ic + chr2L 16017696 intron beat-Ic + chr2L 16017744 intron beat-Ic + chr2L_8_16015001 chr2L_16015001 RAL-810 300 chr2L 16027393 16027427 chr2L 16027469 16027503 10 75 2.0 3.5 2.8 2.6 110 chr2L 16027393 intron beat-Ic + chr2L 16027448 intron beat-Ic + chr2L 16027503 intron beat-Ic + chr2L_10_16025001 chr2L_16025001 RAL-810 301 chr2L 16058124 16058146 chr2L 16058265 16058287 8 141 3.5 3.0 3.2 1.9 163 chr2L 16058124 intron beat-Ia + chr2L 16058206 intron beat-Ia + chr2L 16058287 intron beat-Ia + chr2L_8_16055001 chr2L_16055001 RAL-810 302 chr2L 10176023 10176023 chr2L 16071771 16071771 4 5895748 16.5 11.0 13.8 0.3 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_13120001 chr2L_13120001 RAL-810 303 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 8 145889 11.0 10.0 10.5 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_16140001 chr2L_16140001 RAL-810 304 chr2L 16141160 16141196 chr2L 16146367 16146403 copia 9 5207 2.0 1.5 1.8 3.2 5243 chr2L 16141160 intergenic not near genes chr2L 16143782 intergenic not near genes chr2L 16146403 intergenic not near genes chr2L_9_16140001 chr2L_16140001 RAL-810 305 chr2L 16153750 16153759 chr2L 16160817 16160827 297 5 7068 2.0 2.5 2.2 1.6 7077 chr2L 16153750 intergenic not near genes chr2L 16157288 intergenic not near genes chr2L 16160827 intergenic not near genes chr2L_5_16155001 chr2L_16155001 RAL-810 306 chr2L 16161589 16161613 chr2L 16161740 16161765 5 152 2.5 2.0 2.2 1.6 176 chr2L 16161589 intergenic not near genes chr2L 16161677 intergenic not near genes chr2L 16161765 intergenic not near genes chr2L_5_16160001 chr2L_16160001 RAL-810 307 chr2L 9084337 9084340 chr2L 16217660 16217660 9 7133321 10.5 10.0 10.2 0.8 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-810 308 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 10 145889 11.0 10.0 10.5 0.9 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-810 309 chr2L 16254900 16254915 chr2L 16255159 16255174 5 258 1.5 7.0 4.2 1.0 274 chr2L 16254900 intron PRL-1 - chr2L 16255037 intron PRL-1 - chr2L 16255174 intron PRL-1 - chr2L_5_16255001 chr2L_16255001 RAL-810 310 chr2L 16280255 16280279 chr2L 16281426 16281450 1360 4 1171 3.0 3.5 3.2 1.0 1195 chr2L 16280255 intron crp - chr2L 16280852 intron crp - chr2L 16281450 intron crp - chr2L_4_16280001 chr2L_16280001 RAL-810 311 chr2L 16504999 16505016 chr2L 16505108 16505126 5 110 0.0 5.0 2.5 1.4 127 chr2L 16504999 intron Tpr2 + chr2L 16505062 intron Tpr2 + chr2L 16505126 intron Tpr2 + chr2L_5_16505001 chr2L_16505001 RAL-810 312 chr2L 16507944 16507953 chr2L 16508030 16508041 4 88 0.0 5.5 2.8 1.1 97 chr2L 16507944 intergenic CG5953 -,Tpr2 + chr2L 16507992 intergenic CG5953 -,Tpr2 + chr2L 16508041 intergenic CG5953 -,Tpr2 + chr2L_4_16505001 chr2L_16505001 RAL-810 313 chr2L 16511985 16511993 chr2L 16519112 16519120 HMS-Beagle 5 7127 3.5 1.5 2.5 1.4 7135 chr2L 16511985 intron CG5953 - chr2L 16515552 intron CG5953 - chr2L 16519120 intron CG5953 - chr2L_5_16515001 chr2L_16515001 RAL-810 314 chr2L 16544653 16544676 chr2L 16544730 16544753 8 77 3.0 5.0 4.0 1.6 100 chr2L 16544653 intergenic CG42389 + chr2L 16544703 intergenic CG42389 + chr2L 16544753 intergenic CG42389 + chr2L_8_16540001 chr2L_16540001 RAL-810 315 chr2L 16582699 16582726 chr2L 16582801 16582828 8 102 3.0 1.0 2.0 2.7 129 chr2L 16582699 intron CG42389 + chr2L 16582764 intron CG42389 + chr2L 16582828 intron CG42389 + chr2L_8_16580001 chr2L_16580001 RAL-810 316 chr2L 16629326 16629329 chr2L 16629411 16629414 4 85 4.0 0.0 2.0 1.3 88 chr2L 16629326 intron CG42389 + chr2L 16629370 intron CG42389 + chr2L 16629414 intron CG42389 + chr2L_4_16625001 chr2L_16625001 RAL-810 317 chr2L 16852246 16852265 chr2L 16858059 16858078 Doc3-element 6 5813 24.5 6.0 15.2 0.4 5832 chr2L 16852246 exon CG31810 - chr2L 16855162 intron CG31809 - chr2L 16858078 intron CG31809 - chr2L_6_16855001 chr2L_16855001 RAL-810 318 chr2L 16952687 16952713 chr2L 16952796 16952822 5 108 0.0 2.5 1.2 2.3 135 chr2L 16952687 intergenic not near genes chr2L 16952754 intergenic not near genes chr2L 16952822 intergenic not near genes chr2L_5_16950001 chr2L_16950001 RAL-810 319 chr2L 16958108 16958130 chr2L 16962896 16962918 Doc 10 4788 3.5 2.0 2.8 2.6 4810 chr2L 16958108 intergenic not near genes chr2L 16960513 intergenic not near genes chr2L 16962918 intergenic not near genes chr2L_10_16960001 chr2L_16960001 RAL-810 320 chr2L 11207245 11207246 chr2L 17044254 17044256 8 5837009 11.0 11.0 11.0 0.7 5837011 chr2L 11207245 intergenic not near genes chr2L 14125750 intergenic not near genes chr2L 17044256 intergenic not near genes chr2L_8_14125001 chr2L_14125001 RAL-810 321 chr2L 17052409 17052443 chr2L 17052521 17052555 8 112 3.0 1.0 2.0 2.7 146 chr2L 17052409 intergenic not near genes chr2L 17052482 intergenic not near genes chr2L 17052555 intergenic not near genes chr2L_8_17050001 chr2L_17050001 RAL-810 322 chr2L 17070199 17070217 chr2L 17070295 17070313 8 95 2.0 3.0 2.5 2.3 114 chr2L 17070199 intergenic not near genes chr2L 17070256 intergenic not near genes chr2L 17070313 intergenic not near genes chr2L_8_17070001 chr2L_17070001 RAL-810 323 chr2L 17087386 17087401 chr2L 17087496 17087519 5 116 2.5 2.0 2.2 1.6 133 chr2L 17087386 intergenic CG12620 + chr2L 17087452 intergenic CG12620 + chr2L 17087519 intergenic CG12620 + chr2L_5_17085001 chr2L_17085001 RAL-810 324 chr2L 17118686 17118712 chr2L 17118773 17118799 10 87 2.0 1.0 1.5 4.0 113 chr2L 17118686 intergenic not near genes chr2L 17118742 intergenic not near genes chr2L 17118799 intergenic not near genes chr2L_10_17115001 chr2L_17115001 RAL-810 325 chr2L 17122777 17122807 chr2L 17122862 17122892 5 85 0.5 2.0 1.2 2.3 115 chr2L 17122777 intergenic not near genes chr2L 17122834 intergenic CG31784 - chr2L 17122892 intergenic CG31784 - chr2L_5_17120001 chr2L_17120001 RAL-810 326 chr2L 17153170 17153188 chr2L 17153280 17153298 5 107 2.5 1.5 2.0 1.7 128 chr2L 17153170 intron,intron CG34106 +,beat-IIIa + chr2L 17153234 intron,intron CG34106 +,beat-IIIa + chr2L 17153298 intron,intron CG34106 +,beat-IIIa + chr2L_5_17150001 chr2L_17150001 RAL-810 327 chr2L 17199167 17199188 chr2L 17200634 17200655 hobo 4 1467 1.0 5.0 3.0 1.0 1488 chr2L 17199167 intron beat-IIIc - chr2L 17199911 intron beat-IIIc - chr2L 17200655 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 RAL-810 328 chr2L 17264743 17264773 chr2L 17264823 17264853 9 80 0.5 1.5 1.0 4.5 110 chr2L 17264743 intergenic not near genes chr2L 17264798 intergenic not near genes chr2L 17264853 intergenic not near genes chr2L_9_17260001 chr2L_17260001 RAL-810 329 chr2L 17273202 17273222 chr2L 17277985 17278005 F-element 5 4783 2.0 1.5 1.8 1.8 4803 chr2L 17273202 intergenic not near genes chr2L 17275604 intergenic not near genes chr2L 17278005 intergenic not near genes chr2L_5_17275001 chr2L_17275001 RAL-810 330 chr2L 17294257 17294282 chr2L 17294571 17294590 5 309 8.0 6.5 7.2 0.6 333 chr2L 17294257 intergenic not near genes chr2L 17294424 intergenic not near genes chr2L 17294590 intergenic not near genes chr2L_5_17290001 chr2L_17290001 RAL-810 331 chr2L 17319122 17319148 chr2L 17319198 17319224 9 75 1.5 3.5 2.5 2.6 102 chr2L 17319122 3` UTR CR45696 - chr2L 17319173 3` UTR CR45696 - chr2L 17319224 3` UTR CR45696 - chr2L_9_17315001 chr2L_17315001 RAL-810 332 chr2L 17327914 17327924 chr2L 17328000 17328010 6 86 5.0 4.0 4.5 1.1 96 chr2L 17327914 intergenic not near genes chr2L 17327962 intergenic not near genes chr2L 17328010 intergenic not near genes chr2L_6_17325001 chr2L_17325001 RAL-810 333 chr2L 17360023 17360040 chr2L 17360201 17360218 5 178 4.0 0.0 2.0 1.7 195 chr2L 17360023 intergenic not near genes chr2L 17360120 intergenic not near genes chr2L 17360218 intergenic not near genes chr2L_5_17360001 chr2L_17360001 RAL-810 334 chr2L 17432016 17432036 chr2L 17432123 17432143 1360 6 107 0.0 2.0 1.0 3.0 127 chr2L 17432016 intron Dif - chr2L 17432080 intron Dif - chr2L 17432143 intron Dif - chr2L_6_17430001 chr2L_17430001 RAL-810 335 chr2L 17790215 17790241 chr2L 17790298 17790324 5 83 0.0 0.5 0.2 4.2 109 chr2L 17790215 intron CadN2 - chr2L 17790270 intron CadN2 - chr2L 17790324 intron CadN2 - chr2L_5_17790001 chr2L_17790001 RAL-810 336 chr2L 17819922 17819952 chr2L 17825125 17825150 copia 11 5202 2.0 0.0 1.0 5.5 5228 chr2L 17819922 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825150 intron CadN2 - chr2L_11_17820001 chr2L_17820001 RAL-810 337 chr2L 17855496 17855522 chr2L 17855574 17855600 5 76 3.0 1.5 2.2 1.6 104 chr2L 17855496 intron CadN2 - chr2L 17855548 intron CadN2 - chr2L 17855600 intron CadN2 - chr2L_5_17855001 chr2L_17855001 RAL-810 338 chr2L 17893388 17893404 chr2L 17894100 17894116 5 712 2.5 3.5 3.0 1.2 728 chr2L 17893388 intergenic CR43420 + chr2L 17893752 intergenic CR43420 + chr2L 17894116 5` UTR CR43420 + chr2L_5_17890001 chr2L_17890001 RAL-810 339 chr2L 17911962 17911986 chr2L 17914137 17914164 pogo 6 2178 3.0 1.0 2.0 2.0 2202 chr2L 17911962 intergenic not near genes chr2L 17913063 intergenic not near genes chr2L 17914164 intergenic CG43271 - chr2L_6_17910001 chr2L_17910001 RAL-810 340 chr2L 17951945 17951980 chr2L 17953412 17953447 hobo 12 1467 4.5 2.0 3.2 2.9 1502 chr2L 17951945 intergenic CR44398 -,CR44397 - chr2L 17952696 intergenic not near genes chr2L 17953447 intergenic not near genes chr2L_12_17950001 chr2L_17950001 RAL-810 341 chr2L 17987318 17987346 chr2L 17991522 17991550 7 4204 25.5 17.0 21.2 0.3 4232 chr2L 17987318 exon CG5681 + chr2L 17989434 intergenic not near genes chr2L 17991550 3` UTR Prosbeta5R2 + chr2L_7_17985001 chr2L_17985001 RAL-810 342 chr2L 18111241 18111255 chr2L 18111332 18111346 6 91 4.0 1.5 2.8 1.6 105 chr2L 18111241 intergenic not near genes chr2L 18111294 intergenic not near genes chr2L 18111346 intergenic not near genes chr2L_6_18110001 chr2L_18110001 RAL-810 343 chr2L 18254816 18254840 chr2L 18254916 18254940 5 100 2.0 2.5 2.2 1.6 124 chr2L 18254816 intron CG42750 - chr2L 18254878 intron CG42750 - chr2L 18254940 intron CG42750 - chr2L_5_18250001 chr2L_18250001 RAL-810 344 chr2L 18264064 18264093 chr2L 18264141 18264170 5 77 2.5 3.5 3.0 1.2 106 chr2L 18264064 intron CG42750 - chr2L 18264117 intron CG42750 - chr2L 18264170 intron CG42750 - chr2L_5_18260001 chr2L_18260001 RAL-810 345 chr2L 18274051 18274071 chr2L 18274137 18274157 8 86 0.5 0.5 0.5 5.3 106 chr2L 18274051 intron CG42750 - chr2L 18274104 intron CG42750 - chr2L 18274157 intron CG42750 - chr2L_8_18270001 chr2L_18270001 RAL-810 346 chr2L 18303981 18304006 chr2L 18304063 18304096 7 89 4.5 2.5 3.5 1.6 115 chr2L 18303981 intergenic not near genes chr2L 18304038 intergenic not near genes chr2L 18304096 intergenic not near genes chr2L_7_18300001 chr2L_18300001 RAL-810 347 chr2L 18334613 18334642 chr2L 18334698 18334727 6 85 1.0 2.0 1.5 2.4 114 chr2L 18334613 intron Fas3 + chr2L 18334670 intron Fas3 + chr2L 18334727 intron Fas3 + chr2L_6_18330001 chr2L_18330001 RAL-810 348 chr2L 18355905 18355907 chr2L 18356026 18356028 4 121 4.5 0.0 2.2 1.2 123 chr2L 18355905 intron Fas3 + chr2L 18355966 intron Fas3 + chr2L 18356028 intron Fas3 + chr2L_4_18355001 chr2L_18355001 RAL-810 349 chr2L 18408023 18408050 chr2L 18412807 18412834 Doc 9 4784 4.5 0.0 2.2 2.8 4811 chr2L 18408023 intergenic not near genes chr2L 18410428 intergenic not near genes chr2L 18412834 intergenic not near genes chr2L_9_18410001 chr2L_18410001 RAL-810 350 chr2L 18423855 18423873 chr2L 18423946 18423964 8 91 1.0 2.5 1.8 2.9 109 chr2L 18423855 intergenic not near genes chr2L 18423910 intergenic not near genes chr2L 18423964 intergenic not near genes chr2L_8_18420001 chr2L_18420001 RAL-810 351 chr2L 18531870 18531900 chr2L 18531949 18531979 7 79 4.0 0.0 2.0 2.3 109 chr2L 18531870 3` UTR CG10211 + chr2L 18531924 3` UTR CG10211 + chr2L 18531979 intergenic CG10211 + chr2L_7_18530001 chr2L_18530001 RAL-810 352 chr2L 18538567 18538597 chr2L 18538649 18538678 6 81 0.0 3.5 1.8 2.1 111 chr2L 18538567 intron Pde11 - chr2L 18538622 intron Pde11 - chr2L 18538678 intron Pde11 - chr2L_6_18535001 chr2L_18535001 RAL-810 353 chr2L 18565590 18565608 chr2L 18566010 18566042 9 428 2.5 2.5 2.5 2.6 452 chr2L 18565590 intron Pde11 - chr2L 18565816 intron Pde11 - chr2L 18566042 intron Pde11 - chr2L_9_18565001 chr2L_18565001 RAL-810 354 chr2L 18626889 18626915 chr2L 18627063 18627089 5 174 2.0 4.0 3.0 1.2 200 chr2L 18626889 intron MESR3 + chr2L 18626989 intron MESR3 + chr2L 18627089 intron MESR3 + chr2L_5_18625001 chr2L_18625001 RAL-810 355 chr2L 18811407 18811438 chr2L 18811489 18811520 7 82 3.5 0.0 1.8 2.5 113 chr2L 18811407 intergenic CG10570 -,CG42502 - chr2L 18811464 intergenic CG10570 -,CG42502 - chr2L 18811520 intergenic not near genes chr2L_7_18810001 chr2L_18810001 RAL-810 356 chr2L 18812557 18812583 chr2L 18812820 18812845 5 263 2.5 2.0 2.2 1.6 288 chr2L 18812557 intergenic CG17325 +,CG42305 + chr2L 18812701 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812845 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_5_18810001 chr2L_18810001 RAL-810 357 chr2L 18902630 18902650 chr2L 18902911 18902931 7 281 4.0 2.5 3.2 1.7 301 chr2L 18902630 intergenic not near genes chr2L 18902780 intergenic not near genes chr2L 18902931 intergenic not near genes chr2L_7_18900001 chr2L_18900001 RAL-810 358 chr2L 19121039 19121071 chr2L 19121117 19121149 11 78 3.0 1.0 2.0 3.7 110 chr2L 19121039 intergenic l(2)37Cc - chr2L 19121094 intergenic l(2)37Cc - chr2L 19121149 intergenic l(2)37Cc - chr2L_11_19120001 chr2L_19120001 RAL-810 359 chr2L 19147270 19147288 chr2L 19147383 19147403 4 114 3.0 0.0 1.5 1.6 133 chr2L 19147270 intron brat + chr2L 19147336 intron brat + chr2L 19147403 intron brat + chr2L_4_19145001 chr2L_19145001 RAL-810 360 chr2L 19199668 19199706 chr2L 19199745 19199758 7 71 2.0 1.5 1.8 2.5 90 chr2L 19199668 intron drl + chr2L 19199713 intron drl + chr2L 19199758 intron drl + chr2L_7_19195001 chr2L_19195001 RAL-810 361 chr2L 19209614 19209638 chr2L 19209699 19209722 8 85 2.0 3.0 2.5 2.3 108 chr2L 19209614 intergenic not near genes chr2L 19209668 intergenic not near genes chr2L 19209722 intergenic not near genes chr2L_8_19205001 chr2L_19205001 RAL-810 362 chr2L 19241057 19241087 chr2L 19241136 19241165 5 78 2.0 3.0 2.5 1.4 108 chr2L 19241057 intergenic not near genes chr2L 19241111 intergenic not near genes chr2L 19241165 intergenic not near genes chr2L_5_19240001 chr2L_19240001 RAL-810 363 chr2L 19305616 19305634 chr2L 19305722 19305740 9 106 2.5 4.0 3.2 2.1 124 chr2L 19305616 intergenic not near genes chr2L 19305678 intergenic not near genes chr2L 19305740 intergenic not near genes chr2L_9_19305001 chr2L_19305001 RAL-810 364 chr2L 19309620 19309648 chr2L 19309699 19309728 6 80 3.5 1.5 2.5 1.7 108 chr2L 19309620 intergenic not near genes chr2L 19309674 intergenic not near genes chr2L 19309728 intergenic not near genes chr2L_6_19305001 chr2L_19305001 RAL-810 365 chr2L 19316197 19316222 chr2L 19316274 19316299 8 77 2.5 0.0 1.2 3.6 102 chr2L 19316197 intergenic not near genes chr2L 19316248 intergenic not near genes chr2L 19316299 intergenic not near genes chr2L_8_19315001 chr2L_19315001 RAL-810 366 chr2L 19345026 19345042 chr2L 19357235 19357251 blood 5 12209 3.5 6.0 4.8 0.9 12225 chr2L 19345026 intron dnt - chr2L 19351138 intron dnt - chr2L 19357251 intron dnt - chr2L_5_19350001 chr2L_19350001 RAL-810 367 chr2L 19357546 19357569 chr2L 19357635 19357659 6 90 1.0 1.0 1.0 3.0 113 chr2L 19357546 intron dnt - chr2L 19357602 intron dnt - chr2L 19357659 intron dnt - chr2L_6_19355001 chr2L_19355001 RAL-810 368 chr2L 19360589 19360616 chr2L 19360726 19360753 5 136 3.5 3.5 3.5 1.1 164 chr2L 19360589 intron dnt - chr2L 19360671 intron dnt - chr2L 19360753 intron dnt - chr2L_5_19360001 chr2L_19360001 RAL-810 369 chr2L 19365561 19365565 chr2L 19365632 19365641 4 75 0.0 7.5 3.8 0.8 80 chr2L 19365561 intergenic CG13086 + chr2L 19365601 intergenic CG13086 + chr2L 19365641 intergenic CG13086 + chr2L_4_19365001 chr2L_19365001 RAL-810 370 chr2L 19405619 19405636 chr2L 19405708 19405726 7 90 2.0 2.0 2.0 2.3 107 chr2L 19405619 intron Pax - chr2L 19405672 intron Pax - chr2L 19405726 intron Pax - chr2L_7_19405001 chr2L_19405001 RAL-810 371 chr2L 19543124 19543147 chr2L 19543208 19543231 10 84 5.0 3.0 4.0 2.0 107 chr2L 19543124 intron ref(2)P + chr2L 19543178 intron ref(2)P + chr2L 19543231 intron ref(2)P + chr2L_10_19540001 chr2L_19540001 RAL-810 372 chr2L 19559183 19559209 chr2L 19559271 19559297 6 88 3.0 3.5 3.2 1.4 114 chr2L 19559183 exon Tep5 + chr2L 19559240 exon Tep5 + chr2L 19559297 exon Tep5 + chr2L_6_19555001 chr2L_19555001 RAL-810 373 chr2L 19560004 19560035 chr2L 19560256 19560287 7 252 4.0 2.0 3.0 1.8 283 chr2L 19560004 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560287 intron Tep5 + chr2L_7_19560001 chr2L_19560001 RAL-810 374 chr2L 19562529 19562562 chr2L 19562609 19562642 6 80 3.0 2.0 2.5 1.7 113 chr2L 19562529 exon Tep5 + chr2L 19562586 intron Tep5 + chr2L 19562642 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-810 375 chr2L 19601571 19601599 chr2L 19601648 19601676 10 76 0.5 4.0 2.2 3.1 105 chr2L 19601571 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601676 intron,intron Lar +,CR44978 - chr2L_10_19600001 chr2L_19600001 RAL-810 376 chr2L 19617639 19617651 chr2L 19618081 19618093 6 444 0.5 3.5 2.0 2.0 454 chr2L 19617639 intron Lar + chr2L 19617866 intron Lar + chr2L 19618093 intron Lar + chr2L_6_19615001 chr2L_19615001 RAL-810 377 chr2L 19623582 19623611 chr2L 19623677 19623706 11 95 0.0 4.5 2.2 3.4 124 chr2L 19623582 intron Lar + chr2L 19623644 intron Lar + chr2L 19623706 intron Lar + chr2L_11_19620001 chr2L_19620001 RAL-810 378 chr2L 19652572 19652602 chr2L 19674005 19674038 opus 10 21436 2.0 2.0 2.0 3.3 21466 chr2L 19652572 intron Lar + chr2L 19663305 intron Lar + chr2L 19674038 intron Lar + chr2L_10_19660001 chr2L_19660001 RAL-810 379 chr2L 19703537 19703569 chr2L 19712673 19712705 roo 8 9136 3.5 1.0 2.2 2.5 9168 chr2L 19703537 intron Lar + chr2L 19708121 intron Lar + chr2L 19712705 intron Lar + chr2L_8_19705001 chr2L_19705001 RAL-810 380 chr2L 19737361 19737376 chr2L 19740830 19740844 1360 8 3467 5.0 3.5 4.2 1.5 3483 chr2L 19737361 intergenic Nf-YB + chr2L 19739102 intergenic not near genes chr2L 19740844 intergenic not near genes chr2L_8_19735001 chr2L_19735001 RAL-810 381 chr2L 19762813 19762839 chr2L 19763055 19763081 pogo 7 242 1.5 4.0 2.8 1.8 268 chr2L 19762813 5` UTR fbp - chr2L 19762947 intron fbp - chr2L 19763081 intron fbp - chr2L_7_19760001 chr2L_19760001 RAL-810 382 chr2L 19773165 19773193 chr2L 19773252 19773280 14 87 4.0 2.5 3.2 3.3 115 chr2L 19773165 intergenic not near genes chr2L 19773222 intergenic not near genes chr2L 19773280 intergenic not near genes chr2L_14_19770001 chr2L_19770001 RAL-810 383 chr2L 19874224 19874232 chr2L 19874570 19874580 5 348 0.0 2.5 1.2 2.3 356 chr2L 19874224 intron sick + chr2L 19874402 intron sick + chr2L 19874580 intron sick + chr2L_5_19870001 chr2L_19870001 RAL-810 384 chr2L 19942875 19942903 chr2L 19942953 19942981 9 78 2.0 2.0 2.0 3.0 106 chr2L 19942875 intron sick + chr2L 19942928 intron sick + chr2L 19942981 intron sick + chr2L_9_19940001 chr2L_19940001 RAL-810 385 chr2L 19947557 19947734 chr2L 19947673 19947820 9 110 3.5 3.5 3.5 2.0 263 chr2L 19947557 intron sick + chr2L 19947688 intron sick + chr2L 19947820 intron sick + chr2L_9_19945001 chr2L_19945001 RAL-810 386 chr2L 19972218 19972246 chr2L 19972340 19972368 6 122 2.5 2.0 2.2 1.9 150 chr2L 19972218 intron CG43861 - chr2L 19972293 intron CG43861 - chr2L 19972368 intron CG43861 - chr2L_6_19970001 chr2L_19970001 RAL-810 387 chr2L 20005871 20005904 chr2L 20010946 20010980 flea 11 5074 2.5 2.5 2.5 3.1 5109 chr2L 20005871 intron CG43861 - chr2L 20008426 intron CG43861 - chr2L 20010980 intron CG43861 - chr2L_11_20005001 chr2L_20005001 RAL-810 388 chr2L 20013889 20013919 chr2L 20013972 20014002 6 83 5.0 5.5 5.2 1.0 113 chr2L 20013889 intron CG43861 - chr2L 20013946 intron CG43861 - chr2L 20014002 intron CG43861 - chr2L_6_20010001 chr2L_20010001 RAL-810 389 chr2L 20079514 20079548 chr2L 20079635 20079669 11 119 1.5 2.5 2.0 3.7 155 chr2L 20079514 intron,intron neb +,fok - chr2L 20079592 intron,intron neb +,fok - chr2L 20079669 intron,intron neb +,fok - chr2L_11_20075001 chr2L_20075001 RAL-810 390 chr2L 20085465 20085496 chr2L 20085556 20085582 8 88 2.5 1.5 2.0 2.7 117 chr2L 20085465 intron neb + chr2L 20085524 intron neb + chr2L 20085582 intron neb + chr2L_8_20085001 chr2L_20085001 RAL-810 391 chr2L 20272121 20272134 chr2L 20282831 20282845 copia 6 10711 3.5 7.0 5.2 1.0 10724 chr2L 20272121 intergenic not near genes chr2L 20277483 intergenic not near genes chr2L 20282845 intergenic not near genes chr2L_6_20275001 chr2L_20275001 RAL-810 392 chr2L 20296519 20296538 chr2L 20296600 20296619 4 81 1.0 6.0 3.5 0.9 100 chr2L 20296519 intergenic CR43414 - chr2L 20296569 intergenic CR43414 - chr2L 20296619 intergenic CR43414 - chr2L_4_20295001 chr2L_20295001 RAL-810 393 chr2L 20298824 20298850 chr2L 20298907 20298922 7 81 4.5 0.5 2.5 2.0 98 chr2L 20298824 intergenic not near genes chr2L 20298873 intergenic not near genes chr2L 20298922 intergenic not near genes chr2L_7_20295001 chr2L_20295001 RAL-810 394 chr2L 20303000 20303018 chr2L 20303090 20303108 5 90 2.0 0.0 1.0 2.5 108 chr2L 20303000 intergenic not near genes chr2L 20303054 intergenic not near genes chr2L 20303108 intergenic not near genes chr2L_5_20300001 chr2L_20300001 RAL-810 395 chr2L 20303159 20303184 chr2L 20310627 20310652 blood 11 7468 0.0 3.5 1.8 3.9 7493 chr2L 20303159 intergenic not near genes chr2L 20306906 intergenic not near genes chr2L 20310652 intergenic not near genes chr2L_11_20305001 chr2L_20305001 RAL-810 396 chr2L 20310883 20310922 chr2L 20310962 20311001 9 79 0.5 2.0 1.2 4.1 118 chr2L 20310883 intergenic spir + chr2L 20310942 intergenic spir + chr2L 20311001 intergenic spir + chr2L_9_20310001 chr2L_20310001 RAL-810 397 chr2L 20372231 20372246 chr2L 20372471 20372487 pogo 8 241 0.5 2.0 1.2 3.6 256 chr2L 20372231 intergenic Ugt37a1 - chr2L 20372359 intergenic Ugt37a1 - chr2L 20372487 exon Ugt37a1 - chr2L_8_20370001 chr2L_20370001 RAL-810 398 chr2L 20549134 20549148 chr2L 20549216 20549230 5 81 6.0 1.5 3.8 1.0 96 chr2L 20549134 intergenic not near genes chr2L 20549182 intergenic not near genes chr2L 20549230 intergenic not near genes chr2L_5_20545001 chr2L_20545001 RAL-810 399 chr2L 20553187 20553221 chr2L 20553262 20553297 8 76 3.5 1.5 2.5 2.3 110 chr2L 20553187 intergenic not near genes chr2L 20553242 intergenic not near genes chr2L 20553297 intergenic not near genes chr2L_8_20550001 chr2L_20550001 RAL-810 400 chr2L 20568664 20568686 chr2L 20569054 20569076 X-element 4 390 2.0 3.0 2.5 1.1 412 chr2L 20568664 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569076 intron CR45347 + chr2L_4_20565001 chr2L_20565001 RAL-810 401 chr2L 20576223 20576235 chr2L 20583692 20583704 blood 4 7469 4.5 3.5 4.0 0.8 7481 chr2L 20576223 intergenic not near genes chr2L 20579964 intergenic not near genes chr2L 20583704 3` UTR CR44909 - chr2L_4_20575001 chr2L_20575001 RAL-810 402 chr2L 20601792 20601814 chr2L 20601870 20601892 5 78 3.0 3.5 3.2 1.2 100 chr2L 20601792 intron CR44909 - chr2L 20601842 intron CR44909 - chr2L 20601892 intron CR44909 - chr2L_5_20600001 chr2L_20600001 RAL-810 403 chr2L 20602716 20602743 chr2L 20602804 20602831 8 88 2.5 3.0 2.8 2.1 115 chr2L 20602716 intron CR44909 - chr2L 20602774 intron CR44909 - chr2L 20602831 intron CR44909 - chr2L_8_20600001 chr2L_20600001 RAL-810 404 chr2L 20668689 20668718 chr2L 20668765 20668794 10 76 3.0 5.0 4.0 2.0 105 chr2L 20668689 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668794 intron CG31678 - chr2L_10_20665001 chr2L_20665001 RAL-810 405 chr2L 20695633 20695655 chr2L 20695745 20695767 8 112 4.0 1.5 2.8 2.1 134 chr2L 20695633 intron Hr38 - chr2L 20695700 intron Hr38 - chr2L 20695767 intron Hr38 - chr2L_8_20695001 chr2L_20695001 RAL-810 406 chr2L 20818510 20818528 chr2L 20818591 20818608 8 81 3.0 2.0 2.5 2.3 98 chr2L 20818510 exon CheB38a - chr2L 20818559 intergenic CheB38a - chr2L 20818608 intergenic CheB38a - chr2L_8_20815001 chr2L_20815001 RAL-810 407 chr2L 20835807 20835839 chr2L 20836524 20836555 Quasimodo 9 717 3.0 4.0 3.5 2.0 748 chr2L 20835807 5` UTR Oseg5 - chr2L 20836181 intergenic Oseg5 -,Spn38F - chr2L 20836555 intergenic Spn38F - chr2L_9_20835001 chr2L_20835001 RAL-810 408 chr2L 20946944 20946961 chr2L 20947031 20947048 4 87 3.0 0.5 1.8 1.4 104 chr2L 20946944 intergenic CR44606 - chr2L 20946996 intergenic CR44606 - chr2L 20947048 intergenic CR44606 - chr2L_4_20945001 chr2L_20945001 RAL-810 409 chr2L 20948120 20948149 chr2L 20948201 20948231 7 81 0.5 1.5 1.0 3.5 111 chr2L 20948120 3` UTR CR44606 - chr2L 20948176 intergenic CR44606 - chr2L 20948231 intergenic CR44606 - chr2L_7_20945001 chr2L_20945001 RAL-810 410 chr2L 20976641 20976670 chr2L 20981456 20981485 X-element 4 4815 1.5 4.0 2.8 1.1 4844 chr2L 20976641 intron CG42238 - chr2L 20979063 intron CG42238 - chr2L 20981485 intron CG42238 - chr2L_4_20975001 chr2L_20975001 RAL-810 411 chr2L 20984737 20984768 chr2L 20984829 20984860 12 92 1.0 3.0 2.0 4.0 123 chr2L 20984737 intron CG42238 - chr2L 20984798 intron CG42238 - chr2L 20984860 intron CG42238 - chr2L_12_20980001 chr2L_20980001 RAL-810 412 chr2L 21020283 21020308 chr2L 21023960 21023985 NOF 5 3677 0.5 3.0 1.8 1.8 3702 chr2L 21020283 intron CG42238 - chr2L 21022134 intron CG42238 - chr2L 21023985 intron CG42238 - chr2L_5_21020001 chr2L_21020001 RAL-810 413 chr2L 21041133 21041166 chr2L 21049394 21049427 Tirant 7 8260 4.0 2.5 3.2 1.7 8294 chr2L 21041133 intron CG42238 - chr2L 21045280 intron CG42238 - chr2L 21049427 intron CG42238 - chr2L_7_21045001 chr2L_21045001 RAL-810 414 chr2L 21113685 21113715 chr2L 21113778 21113808 6 93 3.0 3.5 3.2 1.4 123 chr2L 21113685 intron Nhe2 + chr2L 21113746 intron Nhe2 + chr2L 21113808 intron Nhe2 + chr2L_6_21110001 chr2L_21110001 RAL-810 415 chr2L 21124540 21124563 chr2L 21124626 21124649 6 86 1.0 6.0 3.5 1.3 109 chr2L 21124540 intron Nhe2 + chr2L 21124594 intron Nhe2 + chr2L 21124649 intron Nhe2 + chr2L_6_21120001 chr2L_21120001 RAL-810 416 chr2L 21233969 21233999 chr2L 21234066 21234096 10 97 1.0 3.0 2.0 3.3 127 chr2L 21233969 intron,5` UTR CG31626 -,CR45713 + chr2L 21234032 intron,5` UTR CG31626 -,CR45713 + chr2L 21234096 intron CG31626 - chr2L_10_21230001 chr2L_21230001 RAL-810 417 chr2L 21286604 21286634 chr2L 21286682 21286712 12 78 2.5 1.5 2.0 4.0 108 chr2L 21286604 exon Mio - chr2L 21286658 intron Mio - chr2L 21286712 intron Mio - chr2L_12_21285001 chr2L_21285001 RAL-810 418 chr2L 21347549 21347583 chr2L 21355021 21355054 blood 7 7471 4.0 2.0 3.0 1.8 7505 chr2L 21347549 intron Tsp39D + chr2L 21351302 intron Tsp39D + chr2L 21355054 intron Tsp39D + chr2L_7_21350001 chr2L_21350001 RAL-810 419 chr2L 21373393 21373412 chr2L 21373495 21373514 12 102 5.5 4.5 5.0 2.0 121 chr2L 21373393 intron CG8665 + chr2L 21373454 intron CG8665 + chr2L 21373514 intron CG8665 + chr2L_12_21370001 chr2L_21370001 RAL-810 420 chr2L 21597032 21597058 chr2L 21604776 21604802 roo 6 7744 3.0 2.0 2.5 1.7 7770 chr2L 21597032 intergenic not near genes chr2L 21600917 intergenic not near genes chr2L 21604802 intergenic not near genes chr2L_6_21600001 chr2L_21600001 RAL-810 421 chr2L 21619073 21619091 chr2L 21621089 21621107 5 2016 4.0 2.0 3.0 1.2 2034 chr2L 21619073 intron CG2201 - chr2L 21620090 intron CG2201 - chr2L 21621107 intron CG2201 - chr2L_5_21620001 chr2L_21620001 RAL-810 422 chr2L 21691832 21691851 chr2L 21698302 21698321 Burdock 5 6470 4.5 0.0 2.2 1.6 6489 chr2L 21691832 intron CG31619 + chr2L 21695076 intron CG31619 + chr2L 21698321 intron CG31619 + chr2L_5_21695001 chr2L_21695001 RAL-810 423 chr2L 21755492 21755523 chr2L 21755616 21755647 9 124 3.0 4.5 3.8 1.9 155 chr2L 21755492 intron step - chr2L 21755570 intron step - chr2L 21755647 intron step - chr2L_9_21755001 chr2L_21755001 RAL-810 424 chr2L 21771227 21771257 chr2L 21771334 21771364 12 107 3.0 1.0 2.0 4.0 137 chr2L 21771227 intron CG31612 - chr2L 21771296 intron CG31612 - chr2L 21771364 intron CG31612 - chr2L_12_21770001 chr2L_21770001 RAL-810 425 chr2L 21825145 21825179 chr2L 21825579 21825613 11 434 1.5 1.5 1.5 4.4 468 chr2L 21825145 intergenic not near genes chr2L 21825379 intergenic not near genes chr2L 21825613 intergenic not near genes chr2L_11_21825001 chr2L_21825001 RAL-810 426 chr2L 21886635 21886656 chr2L 21886714 21886735 6 79 1.0 1.0 1.0 3.0 100 chr2L 21886635 intergenic not near genes chr2L 21886685 intergenic not near genes chr2L 21886735 intergenic not near genes chr2L_6_21885001 chr2L_21885001 RAL-810 427 chr2L 21981680 21981704 chr2L 21990844 21990869 roo 8 9165 4.5 2.0 3.2 1.9 9189 chr2L 21981680 exon CG2528 - chr2L 21986274 intron CG2528 - chr2L 21990869 exon CG2528 - chr2L_8_21985001 chr2L_21985001 RAL-810 428 chr2L 21996948 21996974 chr2L 21997028 21997055 7 81 3.0 1.5 2.2 2.2 107 chr2L 21996948 intergenic not near genes chr2L 21997002 intergenic not near genes chr2L 21997055 intergenic not near genes chr2L_7_21995001 chr2L_21995001 RAL-810 429 chr2L 22169728 22169744 chr2L 22169816 22169832 8 88 4.5 1.5 3.0 2.0 104 chr2L 22169728 5` UTR CR44809 + chr2L 22169780 5` UTR CR44809 + chr2L 22169832 5` UTR CR44809 + chr2L_8_22165001 chr2L_22165001 RAL-810 430 chr2L 22192036 22192060 chr2L 22192125 22192150 5 89 1.0 3.0 2.0 1.7 114 chr2L 22192036 intron Ir40a - chr2L 22192093 intron Ir40a - chr2L 22192150 intron Ir40a - chr2L_5_22190001 chr2L_22190001 RAL-810 431 chr2L 22258618 22258647 chr2L 22260742 22260771 G6 6 2124 1.0 2.0 1.5 2.4 2153 chr2L 22258618 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260771 intergenic not near genes chr2L_6_22255001 chr2L_22255001 RAL-810 432 chr2L 22294363 22294380 chr2L 22294451 22294468 6 88 0.5 4.0 2.2 1.9 105 chr2L 22294363 intergenic not near genes chr2L 22294416 intergenic not near genes chr2L 22294468 intergenic not near genes chr2L_6_22290001 chr2L_22290001 RAL-810 433 chr2L 22319170 22319186 chr2L 22319295 22319311 7 125 2.0 3.5 2.8 1.8 141 chr2L 22319170 intron CG17018 + chr2L 22319240 intron CG17018 + chr2L 22319311 intron CG17018 + chr2L_7_22315001 chr2L_22315001 RAL-810 434 chr2L 22326660 22326695 chr2L 22326742 22326777 8 81 2.0 0.5 1.2 3.6 117 chr2L 22326660 intron CG17018 + chr2L 22326718 intron CG17018 + chr2L 22326777 intron CG17018 + chr2L_8_22325001 chr2L_22325001 RAL-810 435 chr2L 22345125 22345146 chr2L 22345392 22345413 5 267 1.5 1.5 1.5 2.0 288 chr2L 22345125 intron CG17018 + chr2L 22345269 intron CG17018 + chr2L 22345413 intron CG17018 + chr2L_5_22345001 chr2L_22345001 RAL-810 436 chr2L 22446019 22446028 chr2L 22506892 22506901 HMS-Beagle 7 60873 16.5 29.5 23.0 0.3 60882 chr2L 22446019 intergenic not near genes chr2L 22476460 intergenic not near genes chr2L 22506901 intergenic not near genes chr2L_7_22475001 chr2L_22475001 RAL-810 437 chr2L 22548561 22548580 chr2L 22548651 22548670 8 90 2.5 4.0 3.2 1.9 109 chr2L 22548561 intergenic CG17490 + chr2L 22548616 intergenic CG17490 + chr2L 22548670 intergenic CG17490 + chr2L_8_22545001 chr2L_22545001 RAL-810 438 chr2L 22581973 22581989 chr2L 22583762 22583778 S-element 5 1789 3.5 3.0 3.2 1.2 1805 chr2L 22581973 intron CG17494 + chr2L 22582876 intron CG17494 + chr2L 22583778 intron CG17494 + chr2L_5_22580001 chr2L_22580001 RAL-810 439 chr2L 22679800 22679825 chr2L 22684572 22684595 F-element 8 4772 2.0 4.0 3.0 2.0 4795 chr2L 22679800 intron CG40006 - chr2L 22682198 intron CG40006 - chr2L 22684595 intron CG40006 - chr2L_8_22680001 chr2L_22680001 RAL-810 440 chr2L 22776426 22776452 chr2L 22778215 22778241 S-element 7 1789 2.5 3.0 2.8 1.8 1815 chr2L 22776426 intergenic not near genes chr2L 22777334 intergenic not near genes chr2L 22778241 intergenic not near genes chr2L_7_22775001 chr2L_22775001 RAL-810 441 chr2L 23296029 23296034 chr2L 23296345 23296350 4 316 3.0 2.0 2.5 1.1 321 chr2L 23296029 intergenic not near genes chr2L 23296190 intergenic not near genes chr2L 23296350 intergenic not near genes chr2L_4_23295001 chr2L_23295001 RAL-810 442 chr2R 469971 469982 chr2R 473212 473213 F-element 4 3238 1.0 3.0 2.0 1.3 3242 chr2R 469971 intergenic not near genes chr2R 471592 intergenic not near genes chr2R 473213 intergenic not near genes chr2R_4_470001 chr2R_470001 RAL-810 443 chr2R 529321 529357 chr2R 537946 537982 Max-element 5 8625 3.5 1.0 2.2 1.6 8661 chr2R 529321 intron CG40378 + chr2R 533652 intron CG40378 + chr2R 537982 intron CG40378 + chr2R_5_530001 chr2R_530001 RAL-810 444 chr2R 544117 544122 chr2R 544366 544372 4 250 3.0 3.5 3.2 1.0 255 chr2R 544117 intron CG40378 + chr2R 544244 intron CG40378 + chr2R 544372 intron CG40378 + chr2R_4_540001 chr2R_540001 RAL-810 445 chr2R 978070 978094 chr2R 978159 978182 4 89 1.0 3.0 2.0 1.3 112 chr2R 978070 intergenic not near genes chr2R 978126 intergenic not near genes chr2R 978182 intergenic not near genes chr2R_4_975001 chr2R_975001 RAL-810 446 chr2R 1082369 1082372 chr2R 1087131 1087131 Doc 4 4768 6.5 3.0 4.8 0.7 4762 chr2R 1082369 intron rl + chr2R 1084750 intron rl + chr2R 1087131 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-810 447 chr2R 1089976 1089999 chr2R 1090171 1090194 9 195 3.0 5.5 4.2 1.7 218 chr2R 1089976 intron rl + chr2R 1090085 intron rl + chr2R 1090194 intron rl + chr2R_9_1090001 chr2R_1090001 RAL-810 448 chr2R 1441382 1441406 chr2R 1441492 1441519 10 112 1.0 2.5 1.8 3.6 137 chr2R 1441382 intron l(2)41Ab + chr2R 1441450 intron l(2)41Ab + chr2R 1441519 intron l(2)41Ab + chr2R_10_1440001 chr2R_1440001 RAL-810 449 chr2R 1779319 1779353 chr2R 1779397 1779431 9 78 0.5 0.5 0.5 6.0 112 chr2R 1779319 intergenic CG41520 + chr2R 1779375 intergenic CG41520 + chr2R 1779431 intergenic CG41520 + chr2R_9_1775001 chr2R_1775001 RAL-810 450 chr2R 2498987 2499011 chr2R 2508131 2508158 roo 7 9147 5.5 4.0 4.8 1.2 9171 chr2R 2498987 intron MFS17 - chr2R 2503572 intron MFS17 - chr2R 2508158 intron MFS17 - chr2R_7_2500001 chr2R_2500001 RAL-810 451 chr2R 3532617 3532645 chr2R 3536060 3536088 Doc 6 3443 1.5 3.0 2.2 1.9 3471 chr2R 3532617 intergenic not near genes chr2R 3534352 intergenic not near genes chr2R 3536088 intergenic not near genes chr2R_6_3530001 chr2R_3530001 RAL-810 452 chr2R 4375869 4375900 chr2R 4375955 4375986 6 86 2.0 2.5 2.2 1.9 117 chr2R 4375869 intron Gprk1 - chr2R 4375928 intron Gprk1 - chr2R 4375986 intron Gprk1 - chr2R_6_4375001 chr2R_4375001 RAL-810 453 chr2R 4544955 4544985 chr2R 4545058 4545088 5 98 0.5 1.5 1.0 2.5 133 chr2R 4544955 intergenic not near genes chr2R 4545022 intergenic not near genes chr2R 4545088 intergenic not near genes chr2R_5_4545001 chr2R_4545001 RAL-810 454 chr2R 4604556 4604582 chr2R 4604635 4604661 10 79 1.5 4.0 2.8 2.6 105 chr2R 4604556 intron p120ctn + chr2R 4604608 intron p120ctn + chr2R 4604661 intron p120ctn + chr2R_10_4600001 chr2R_4600001 RAL-810 455 chr2R 4622958 4622988 chr2R 4624117 4624147 1360 7 1158 1.5 3.5 2.5 2.0 1189 chr2R 4622958 intergenic CR44101 - chr2R 4623552 intergenic not near genes chr2R 4624147 intergenic not near genes chr2R_7_4620001 chr2R_4620001 RAL-810 456 chr2R 4688104 4688131 chr2R 4688197 4688224 6 93 2.0 3.0 2.5 1.7 120 chr2R 4688104 intergenic not near genes chr2R 4688164 intergenic not near genes chr2R 4688224 intergenic not near genes chr2R_6_4685001 chr2R_4685001 RAL-810 457 chr2R 4750339 4750377 chr2R 4751496 4751534 1360 6 1157 1.5 3.0 2.2 1.9 1195 chr2R 4750339 intron conu + chr2R 4750936 intron conu + chr2R 4751534 intron conu + chr2R_6_4750001 chr2R_4750001 RAL-810 458 chr2R 4821218 4821248 chr2R 4821301 4821334 11 86 1.5 2.0 1.8 3.9 116 chr2R 4821218 intron CG17528 - chr2R 4821276 intron CG17528 - chr2R 4821334 intron CG17528 - chr2R_11_4820001 chr2R_4820001 RAL-810 459 chr2R 4940959 4940976 chr2R 4943409 4943426 6 2450 11.5 4.5 8.0 0.7 2467 chr2R 4940959 intron Ir41a + chr2R 4942192 intron Ir41a + chr2R 4943426 intron Ir41a + chr2R_6_4940001 chr2R_4940001 RAL-810 460 chr2R 4996332 4996347 chr2R 4996460 4996475 5 128 2.5 4.5 3.5 1.1 143 chr2R 4996332 intron Ir41a + chr2R 4996404 intron Ir41a + chr2R 4996475 intron Ir41a + chr2R_5_4995001 chr2R_4995001 RAL-810 461 chr2R 5029691 5029719 chr2R 5029773 5029800 6 81 2.0 5.0 3.5 1.3 109 chr2R 5029691 intergenic not near genes chr2R 5029746 intergenic not near genes chr2R 5029800 intergenic not near genes chr2R_6_5025001 chr2R_5025001 RAL-810 462 chr2R 5075927 5075962 chr2R 5076090 5076124 5 162 24.5 24.5 24.5 0.2 197 chr2R 5075927 intergenic not near genes chr2R 5076026 intergenic not near genes chr2R 5076124 intergenic not near genes chr2R_5_5075001 chr2R_5075001 RAL-810 463 chr2R 5103041 5103070 chr2R 5103134 5103162 10 92 1.5 3.0 2.2 3.1 121 chr2R 5103041 intergenic not near genes chr2R 5103102 intergenic not near genes chr2R 5103162 intergenic not near genes chr2R_10_5100001 chr2R_5100001 RAL-810 464 chr2R 5122998 5123027 chr2R 5123213 5123242 13 215 2.0 2.5 2.2 4.1 244 chr2R 5122998 intron gus - chr2R 5123120 intron gus - chr2R 5123242 intron gus - chr2R_13_5120001 chr2R_5120001 RAL-810 465 chr2R 5342827 5342856 chr2R 5342924 5342953 5 96 3.5 5.0 4.2 1.0 126 chr2R 5342827 intergenic not near genes chr2R 5342890 intergenic not near genes chr2R 5342953 intergenic not near genes chr2R_5_5340001 chr2R_5340001 RAL-810 466 chr2R 5363488 5363513 chr2R 5363566 5363591 6 78 7.5 4.0 5.8 0.9 103 chr2R 5363488 5` UTR CR42646 + chr2R 5363540 intron CR42646 + chr2R 5363591 intron CR42646 + chr2R_6_5360001 chr2R_5360001 RAL-810 467 chr2R 5396265 5396289 chr2R 5396503 5396526 5 238 2.5 3.0 2.8 1.3 261 chr2R 5396265 intergenic not near genes chr2R 5396396 intergenic not near genes chr2R 5396526 intergenic not near genes chr2R_5_5395001 chr2R_5395001 RAL-810 468 chr2R 5410316 5410347 chr2R 5410471 5410502 22 155 1.0 3.5 2.2 6.9 186 chr2R 5410316 intergenic not near genes chr2R 5410409 intergenic not near genes chr2R 5410502 intergenic not near genes chr2R_22_5410001 chr2R_5410001 RAL-810 469 chr2R 5417993 5418027 chr2R 5420625 5420659 Burdock 9 2632 5.5 2.0 3.8 1.9 2666 chr2R 5417993 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420659 intron laccase2 + chr2R_9_5415001 chr2R_5415001 RAL-810 470 chr2R 5455783 5455798 chr2R 5455861 5455876 9 78 4.0 3.5 3.8 1.9 93 chr2R 5455783 3` UTR laccase2 + chr2R 5455830 3` UTR laccase2 + chr2R 5455876 3` UTR laccase2 + chr2R_9_5455001 chr2R_5455001 RAL-810 471 chr2R 5455799 5455804 chr2R 5455858 5455882 4 68 3.5 3.5 3.5 0.9 83 chr2R 5455799 3` UTR laccase2 + chr2R 5455840 3` UTR laccase2 + chr2R 5455882 3` UTR laccase2 + chr2R_4_5455001 chr2R_5455001 RAL-810 472 chr2R 5475453 5475478 chr2R 5475717 5475742 8 264 1.5 1.0 1.2 3.6 289 chr2R 5475453 intron CG30440 - chr2R 5475598 intron CG30440 - chr2R 5475742 intron CG30440 - chr2R_8_5475001 chr2R_5475001 RAL-810 473 chr2R 5476353 5476381 chr2R 5476897 5476924 8 544 0.5 1.0 0.8 4.4 571 chr2R 5476353 intron CG30440 - chr2R 5476638 intron CG30440 - chr2R 5476924 intron CG30440 - chr2R_8_5475001 chr2R_5475001 RAL-810 474 chr2R 5509518 5509539 chr2R 5509614 5509635 5 96 2.5 1.5 2.0 1.7 117 chr2R 5509518 intron CG30438 + chr2R 5509576 intron CG30438 + chr2R 5509635 intron CG30438 + chr2R_5_5505001 chr2R_5505001 RAL-810 475 chr2R 5543197 5543223 chr2R 5547281 5547307 invader1 12 4084 0.0 4.0 2.0 4.0 4110 chr2R 5543197 intron CG30438 + chr2R 5545252 intron CG30438 + chr2R 5547307 intron CG30438 + chr2R_12_5545001 chr2R_5545001 RAL-810 476 chr2R 5653357 5653389 chr2R 5653456 5653488 6 99 4.0 3.0 3.5 1.3 131 chr2R 5653357 intergenic CG1344 + chr2R 5653422 intergenic CG1344 + chr2R 5653488 intergenic CG1344 + chr2R_6_5650001 chr2R_5650001 RAL-810 477 chr2R 5664284 5664307 chr2R 5664364 5664387 13 80 3.5 4.5 4.0 2.6 103 chr2R 5664284 5` UTR CR45472 + chr2R 5664336 intron CR45472 + chr2R 5664387 intron CR45472 + chr2R_13_5660001 chr2R_5660001 RAL-810 478 chr2R 5674593 5674619 chr2R 5674676 5674702 8 83 2.5 1.0 1.8 2.9 109 chr2R 5674593 intergenic not near genes chr2R 5674648 intergenic not near genes chr2R 5674702 intergenic not near genes chr2R_8_5670001 chr2R_5670001 RAL-810 479 chr2R 5722085 5722112 chr2R 5722169 5722196 9 84 2.0 3.5 2.8 2.4 111 chr2R 5722085 intron ap - chr2R 5722140 intron ap - chr2R 5722196 intron ap - chr2R_9_5720001 chr2R_5720001 RAL-810 480 chr2R 5869296 5869299 chr2R 5874372 5874375 flea 4 5076 5.5 6.0 5.8 0.6 5079 chr2R 5869296 intergenic not near genes chr2R 5871836 intergenic not near genes chr2R 5874375 intergenic not near genes chr2R_4_5870001 chr2R_5870001 RAL-810 481 chr2R 5878924 5878958 chr2R 5879003 5879038 9 80 2.5 1.5 2.0 3.0 114 chr2R 5878924 intergenic CG44438 - chr2R 5878981 intergenic CG44438 - chr2R 5879038 intergenic CG44438 - chr2R_9_5875001 chr2R_5875001 RAL-810 482 chr2R 5897021 5897038 chr2R 5897106 5897124 13 85 1.5 1.5 1.5 5.2 103 chr2R 5897021 intron CG43366 + chr2R 5897072 intron CG43366 + chr2R 5897124 intron CG43366 + chr2R_13_5895001 chr2R_5895001 RAL-810 483 chr2R 5902167 5902188 chr2R 5909725 5909745 17.6 7 7558 4.0 8.5 6.2 1.0 7578 chr2R 5902167 intron CG43366 + chr2R 5905956 intron CG43366 + chr2R 5909745 intron CG43366 + chr2R_7_5905001 chr2R_5905001 RAL-810 484 chr2R 5917770 5917799 chr2R 5917849 5917878 8 79 3.0 2.5 2.8 2.1 108 chr2R 5917770 intron CG43366 + chr2R 5917824 intron CG43366 + chr2R 5917878 intron CG43366 + chr2R_8_5915001 chr2R_5915001 RAL-810 485 chr2R 5947935 5947966 chr2R 5948086 5948117 6 151 1.0 0.0 0.5 4.0 182 chr2R 5947935 intergenic not near genes chr2R 5948026 intergenic not near genes chr2R 5948117 intergenic not near genes chr2R_6_5945001 chr2R_5945001 RAL-810 486 chr2R 6033440 6033470 chr2R 6033525 6033555 4 85 2.0 3.0 2.5 1.1 115 chr2R 6033440 intron SCAP - chr2R 6033498 intron SCAP - chr2R 6033555 intron SCAP - chr2R_4_6030001 chr2R_6030001 RAL-810 487 chr2R 6050309 6050317 chr2R 6050402 6050410 4 93 5.5 0.0 2.8 1.1 101 chr2R 6050309 intergenic CG34212 - chr2R 6050360 intergenic CG34212 - chr2R 6050410 intergenic CG34212 - chr2R_4_6050001 chr2R_6050001 RAL-810 488 chr2R 6096722 6096751 chr2R 6101917 6101946 BS 4 5194 4.0 5.5 4.8 0.7 5224 chr2R 6096722 intron EcR - chr2R 6099334 intron EcR - chr2R 6101946 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-810 489 chr2R 6126941 6126961 chr2R 6127048 6127069 9 108 4.5 4.0 4.2 1.7 128 chr2R 6126941 intron EcR - chr2R 6127005 intron EcR - chr2R 6127069 intron EcR - chr2R_9_6125001 chr2R_6125001 RAL-810 490 chr2R 6129333 6129358 chr2R 6129411 6129436 11 78 3.0 2.5 2.8 2.9 103 chr2R 6129333 intron EcR - chr2R 6129384 intron EcR - chr2R 6129436 intron EcR - chr2R_11_6125001 chr2R_6125001 RAL-810 491 chr2R 6131697 6131704 chr2R 6131784 6131791 4 86 7.0 2.0 4.5 0.7 94 chr2R 6131697 intron EcR - chr2R 6131744 intron EcR - chr2R 6131791 intron EcR - chr2R_4_6130001 chr2R_6130001 RAL-810 492 chr2R 6132491 6132509 chr2R 6132585 6132603 8 94 3.0 5.5 4.2 1.5 112 chr2R 6132491 intron EcR - chr2R 6132547 intron EcR - chr2R 6132603 intron EcR - chr2R_8_6130001 chr2R_6130001 RAL-810 493 chr2R 6136775 6136803 chr2R 6136871 6136898 9 96 1.0 3.0 2.0 3.0 123 chr2R 6136775 intron EcR - chr2R 6136836 intron EcR - chr2R 6136898 intron EcR - chr2R_9_6135001 chr2R_6135001 RAL-810 494 chr2R 6151517 6151535 chr2R 6151593 6151611 9 76 3.0 3.0 3.0 2.2 94 chr2R 6151517 intron EcR - chr2R 6151564 intron EcR - chr2R 6151611 intron EcR - chr2R_9_6150001 chr2R_6150001 RAL-810 495 chr2R 6178678 6178713 chr2R 6178765 6178800 15 87 2.0 2.5 2.2 4.7 122 chr2R 6178678 intergenic not near genes chr2R 6178739 intergenic not near genes chr2R 6178800 intergenic not near genes chr2R_15_6175001 chr2R_6175001 RAL-810 496 chr2R 6194691 6194701 chr2R 6194774 6194784 6 83 5.0 5.5 5.2 1.0 93 chr2R 6194691 intron Ptr - chr2R 6194738 intron Ptr - chr2R 6194784 intron Ptr - chr2R_6_6190001 chr2R_6190001 RAL-810 497 chr2R 6236729 6236735 chr2R 6236836 6236842 4 107 1.5 2.5 2.0 1.3 113 chr2R 6236729 intron bin3 + chr2R 6236786 intron bin3 + chr2R 6236842 intron bin3 + chr2R_4_6235001 chr2R_6235001 RAL-810 498 chr2R 6494525 6494544 chr2R 6499287 6499306 F-element 6 4761 3.0 3.0 3.0 1.5 4781 chr2R 6494525 intergenic not near genes chr2R 6496916 intergenic not near genes chr2R 6499306 intergenic not near genes chr2R_6_6495001 chr2R_6495001 RAL-810 499 chr2R 6530770 6530793 chr2R 6530850 6530872 7 80 2.0 3.5 2.8 1.8 102 chr2R 6530770 intron jing + chr2R 6530821 intron jing + chr2R 6530872 intron jing + chr2R_7_6530001 chr2R_6530001 RAL-810 500 chr2R 6559106 6559134 chr2R 6559189 6559217 10 82 2.5 2.5 2.5 2.9 111 chr2R 6559106 intron jing + chr2R 6559162 intron jing + chr2R 6559217 intron jing + chr2R_10_6555001 chr2R_6555001 RAL-810 501 chr2R 6607934 6607953 chr2R 6608035 6608055 6 102 5.0 2.5 3.8 1.2 121 chr2R 6607934 intron jing + chr2R 6607994 intron jing + chr2R 6608055 intron jing + chr2R_6_6605001 chr2R_6605001 RAL-810 502 chr2R 6691126 6691153 chr2R 6691205 6691232 6 79 2.5 2.5 2.5 1.7 106 chr2R 6691126 intron CG9422 + chr2R 6691179 intron CG9422 + chr2R 6691232 intron CG9422 + chr2R_6_6690001 chr2R_6690001 RAL-810 503 chr2R 6699595 6699623 chr2R 6699680 6699708 7 85 3.5 2.5 3.0 1.8 113 chr2R 6699595 intergenic Rab2 + chr2R 6699652 intergenic Rab2 + chr2R 6699708 intergenic Rab2 + chr2R_7_6695001 chr2R_6695001 RAL-810 504 chr2R 6710717 6710735 chr2R 6710901 6710928 5 191 0.0 4.0 2.0 1.7 211 chr2R 6710717 intron,intron CG3409 -,CG45092 - chr2R 6710822 intron,intron CG3409 -,CG45092 - chr2R 6710928 intron,intron CG3409 -,CG45092 - chr2R_5_6710001 chr2R_6710001 RAL-810 505 chr2R 6712586 6712598 chr2R 6712683 6712694 6 97 5.0 1.0 3.0 1.5 108 chr2R 6712586 intron,intron CG3409 -,CG45092 - chr2R 6712640 intron,intron CG3409 -,CG45092 - chr2R 6712694 intron,intron CG3409 -,CG45092 - chr2R_6_6710001 chr2R_6710001 RAL-810 506 chr2R 6912834 6912864 chr2R 6913123 6913154 7 290 2.5 3.5 3.0 1.8 320 chr2R 6912834 intron CG30158 + chr2R 6912994 intron CG30158 + chr2R 6913154 intron CG30158 + chr2R_7_6910001 chr2R_6910001 RAL-810 507 chr2R 6948082 6948107 chr2R 6948158 6948183 7 76 3.0 1.5 2.2 2.2 101 chr2R 6948082 intron,intron mim -,CheB42c - chr2R 6948132 intron,intron mim -,CheB42c - chr2R 6948183 intron,intron mim -,CheB42c - chr2R_7_6945001 chr2R_6945001 RAL-810 508 chr2R 7024529 7024532 chr2R 7024629 7024632 4 100 6.0 2.5 4.2 0.8 103 chr2R 7024529 intergenic CR44172 -,Tsp42Ef + chr2R 7024580 intergenic Tsp42Ef +,CR44172 - chr2R 7024632 intergenic Tsp42Ef + chr2R_4_7020001 chr2R_7020001 RAL-810 509 chr2R 7067607 7067623 chr2R 7067691 7067707 6 84 2.5 2.0 2.2 1.9 100 chr2R 7067607 intergenic not near genes chr2R 7067657 intergenic not near genes chr2R 7067707 intergenic not near genes chr2R_6_7065001 chr2R_7065001 RAL-810 510 chr2R 7139948 7139952 chr2R 7141440 7141444 hopper2 4 1492 5.0 5.0 5.0 0.7 1496 chr2R 7139948 intergenic not near genes chr2R 7140696 intergenic not near genes chr2R 7141444 intergenic not near genes chr2R_4_7140001 chr2R_7140001 RAL-810 511 chr2R 7196573 7196601 chr2R 7201348 7201374 F-element 9 4775 2.5 2.5 2.5 2.6 4801 chr2R 7196573 intron pk + chr2R 7198974 intron pk + chr2R 7201374 intron pk + chr2R_9_7195001 chr2R_7195001 RAL-810 512 chr2R 7226638 7226661 chr2R 7226733 7226756 7 92 4.5 0.5 2.5 2.0 118 chr2R 7226638 intergenic not near genes chr2R 7226697 intergenic not near genes chr2R 7226756 intergenic not near genes chr2R_7_7225001 chr2R_7225001 RAL-810 513 chr2R 7235828 7235852 chr2R 7240920 7240943 jockey 4 5092 2.0 1.5 1.8 1.4 5115 chr2R 7235828 intergenic not near genes chr2R 7238386 intergenic not near genes chr2R 7240943 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-810 514 chr2R 7291574 7291590 chr2R 7291940 7291956 6 366 21.0 21.5 21.2 0.3 382 chr2R 7291574 intron pwn + chr2R 7291765 intron pwn + chr2R 7291956 intron pwn + chr2R_6_7290001 chr2R_7290001 RAL-810 515 chr2R 7353386 7353419 chr2R 7353492 7353525 10 106 2.0 1.5 1.8 3.6 139 chr2R 7353386 intron Dscam1 - chr2R 7353456 intron Dscam1 - chr2R 7353525 intron Dscam1 - chr2R_10_7350001 chr2R_7350001 RAL-810 516 chr2R 7434897 7434916 chr2R 7439198 7439217 Juan 6 4301 5.0 9.5 7.2 0.7 4320 chr2R 7434897 intergenic so + chr2R 7437057 intergenic not near genes chr2R 7439217 intergenic not near genes chr2R_6_7435001 chr2R_7435001 RAL-810 517 chr2R 7459279 7459299 chr2R 7459367 7459387 7 88 4.5 2.0 3.2 1.7 108 chr2R 7459279 intergenic Inos -,CG11141 - chr2R 7459333 intergenic CG11141 -,Inos - chr2R 7459387 intergenic CG11141 - chr2R_7_7455001 chr2R_7455001 RAL-810 518 chr2R 7554108 7554137 chr2R 7554195 7554224 6 87 3.0 2.5 2.8 1.6 116 chr2R 7554108 intron Corin + chr2R 7554166 intron Corin + chr2R 7554224 intron Corin + chr2R_6_7550001 chr2R_7550001 RAL-810 519 chr2R 7563238 7563248 chr2R 7563316 7563340 6 87 2.0 4.0 3.0 1.5 102 chr2R 7563238 3` UTR Corin + chr2R 7563289 3` UTR Corin + chr2R 7563340 3` UTR Corin + chr2R_6_7560001 chr2R_7560001 RAL-810 520 chr2R 7608406 7608432 chr2R 7613609 7613634 I-element 6 5203 2.0 0.0 1.0 3.0 5228 chr2R 7608406 intron CG1358 - chr2R 7611020 intron CG1358 - chr2R 7613634 intron CG1358 - chr2R_6_7610001 chr2R_7610001 RAL-810 521 chr2R 7692013 7692035 chr2R 7692094 7692116 6 81 1.5 4.0 2.8 1.6 103 chr2R 7692013 intron CG1399 - chr2R 7692064 intron CG1399 - chr2R 7692116 intron CG1399 - chr2R_6_7690001 chr2R_7690001 RAL-810 522 chr2R 7708350 7708375 chr2R 7708447 7708473 12 98 1.5 3.5 2.5 3.4 123 chr2R 7708350 intron tor - chr2R 7708412 intron tor - chr2R 7708473 intron tor - chr2R_12_7705001 chr2R_7705001 RAL-810 523 chr2R 7769743 7769771 chr2R 7769820 7769848 6 77 5.5 2.5 4.0 1.2 105 chr2R 7769743 intron,intron CG30497 -,CG45093 - chr2R 7769796 intron,intron CG30497 -,CG45093 - chr2R 7769848 intron,intron CG30497 -,CG45093 - chr2R_6_7765001 chr2R_7765001 RAL-810 524 chr2R 7815671 7815704 chr2R 7822140 7822173 Burdock 10 6469 4.5 4.5 4.5 1.8 6502 chr2R 7815671 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822173 3` UTR cathD - chr2R_10_7815001 chr2R_7815001 RAL-810 525 chr2R 7861462 7861477 chr2R 7861674 7861688 8 212 5.5 3.5 4.5 1.5 226 chr2R 7861462 intron Dgk - chr2R 7861575 intron Dgk - chr2R 7861688 intron Dgk - chr2R_8_7860001 chr2R_7860001 RAL-810 526 chr2R 7869191 7869207 chr2R 7873977 7873993 Doc 9 4786 3.0 3.5 3.2 2.1 4802 chr2R 7869191 intron Dgk - chr2R 7871592 intron Dgk - chr2R 7873993 intron Dgk - chr2R_9_7870001 chr2R_7870001 RAL-810 527 chr2R 7892149 7892183 chr2R 7892373 7892407 12 223 3.0 2.0 2.5 3.4 258 chr2R 7892149 intron CG30377 + chr2R 7892278 intron CG30377 + chr2R 7892407 intron CG30377 + chr2R_12_7890001 chr2R_7890001 RAL-810 528 chr2R 7916429 7916454 chr2R 7916512 7916539 5 84 2.0 1.5 1.8 1.8 110 chr2R 7916429 5` UTR CG12159 - chr2R 7916484 intergenic CG12159 -,Cul1 + chr2R 7916539 intergenic CG12159 -,Cul1 + chr2R_5_7915001 chr2R_7915001 RAL-810 529 chr2R 7926928 7926938 chr2R 7927004 7927012 7 75 2.5 5.5 4.0 1.4 84 chr2R 7926928 intron CG8791 + chr2R 7926970 intron CG8791 + chr2R 7927012 intron CG8791 + chr2R_7_7925001 chr2R_7925001 RAL-810 530 chr2R 7999580 7999588 chr2R 7999663 7999671 5 83 2.5 0.0 1.2 2.3 91 chr2R 7999580 intergenic not near genes chr2R 7999626 intergenic not near genes chr2R 7999671 intergenic not near genes chr2R_5_7995001 chr2R_7995001 RAL-810 531 chr2R 8067065 8067097 chr2R 8067149 8067181 11 84 3.0 6.0 4.5 2.0 116 chr2R 8067065 intron CG17977 - chr2R 8067123 intron CG17977 - chr2R 8067181 exon CG17977 - chr2R_11_8065001 chr2R_8065001 RAL-810 532 chr2R 8076680 8076710 chr2R 8076758 8076790 11 80 4.5 2.0 3.2 2.6 110 chr2R 8076680 intron lig + chr2R 8076735 intron lig + chr2R 8076790 intron lig + chr2R_11_8075001 chr2R_8075001 RAL-810 533 chr2R 8089257 8089280 chr2R 8089342 8089366 11 86 2.0 0.0 1.0 5.5 109 chr2R 8089257 3` UTR sut2 + chr2R 8089312 intergenic sut2 +,sut3 + chr2R 8089366 intergenic sut2 +,sut3 + chr2R_11_8085001 chr2R_8085001 RAL-810 534 chr2R 8114033 8114062 chr2R 8114122 8114151 9 89 0.0 4.0 2.0 3.0 118 chr2R 8114033 intergenic Asap - chr2R 8114092 intergenic Asap - chr2R 8114151 intergenic Asap - chr2R_9_8110001 chr2R_8110001 RAL-810 535 chr2R 8157904 8157908 chr2R 8157990 8157996 4 87 4.0 1.0 2.5 1.1 92 chr2R 8157904 5` UTR CR44068 + chr2R 8157950 5` UTR CR44068 + chr2R 8157996 5` UTR CR44068 + chr2R_4_8155001 chr2R_8155001 RAL-810 536 chr2R 8218557 8218564 chr2R 8218711 8218719 4 155 3.0 5.0 4.0 0.8 162 chr2R 8218557 intron LRP1 + chr2R 8218638 intron LRP1 + chr2R 8218719 intron LRP1 + chr2R_4_8215001 chr2R_8215001 RAL-810 537 chr2R 8236040 8236063 chr2R 8236121 8236143 5 81 1.5 4.0 2.8 1.3 103 chr2R 8236040 intergenic not near genes chr2R 8236092 intergenic not near genes chr2R 8236143 intergenic not near genes chr2R_5_8235001 chr2R_8235001 RAL-810 538 chr2R 8330871 8330892 chr2R 8331357 8331378 roo 5 486 2.0 4.5 3.2 1.2 507 chr2R 8330871 intron pdm3 + chr2R 8331124 intron pdm3 + chr2R 8331378 intron pdm3 + chr2R_5_8330001 chr2R_8330001 RAL-810 539 chr2R 8403661 8403671 chr2R 8403838 8403848 4 177 4.5 1.5 3.0 1.0 187 chr2R 8403661 intron CG2121 - chr2R 8403754 intron CG2121 - chr2R 8403848 intron CG2121 - chr2R_4_8400001 chr2R_8400001 RAL-810 540 chr2R 8480948 8480970 chr2R 8481072 8481094 7 124 3.0 2.0 2.5 2.0 146 chr2R 8480948 intron mtt - chr2R 8481021 intron mtt - chr2R 8481094 intron mtt - chr2R_7_8480001 chr2R_8480001 RAL-810 541 chr2R 8483964 8483988 chr2R 8484040 8484063 6 76 1.5 2.0 1.8 2.1 99 chr2R 8483964 intron mtt - chr2R 8484014 intron mtt - chr2R 8484063 intron mtt - chr2R_6_8480001 chr2R_8480001 RAL-810 542 chr2R 8501140 8501147 chr2R 8501232 8501239 4 92 0.0 0.0 0.0 4.0 99 chr2R 8501140 intron mtt - chr2R 8501190 intron mtt - chr2R 8501239 intron mtt - chr2R_4_8500001 chr2R_8500001 RAL-810 543 chr2R 8525084 8525109 chr2R 8525161 8525186 10 77 0.0 2.0 1.0 5.0 102 chr2R 8525084 intron mtt - chr2R 8525135 intron mtt - chr2R 8525186 intron mtt - chr2R_10_8525001 chr2R_8525001 RAL-810 544 chr2R 8536199 8536226 chr2R 8536431 8536458 5 231 4.0 1.5 2.8 1.3 259 chr2R 8536199 intergenic not near genes chr2R 8536328 intergenic not near genes chr2R 8536458 intergenic not near genes chr2R_5_8535001 chr2R_8535001 RAL-810 545 chr2R 8566030 8566065 chr2R 8566982 8567009 1360 6 948 2.5 0.0 1.2 2.7 979 chr2R 8566030 5` UTR Cyp6a14 - chr2R 8566520 5` UTR Cyp6a14 - chr2R 8567009 5` UTR Cyp6a14 - chr2R_6_8565001 chr2R_8565001 RAL-810 546 chr2R 8615774 8615809 chr2R 8615886 8615922 15 112 1.5 2.5 2.0 5.0 148 chr2R 8615774 intron Cirl + chr2R 8615848 intron Cirl + chr2R 8615922 5` UTR Cirl + chr2R_15_8615001 chr2R_8615001 RAL-810 547 chr2R 8714708 8714712 chr2R 8714781 8714799 4 80 0.0 4.0 2.0 1.3 91 chr2R 8714708 3` UTR PGRP-SC1b + chr2R 8714754 3` UTR PGRP-SC1b + chr2R 8714799 3` UTR PGRP-SC1b + chr2R_4_8710001 chr2R_8710001 RAL-810 548 chr2R 8722764 8722792 chr2R 8723005 8723033 pogo 6 241 3.5 1.0 2.2 1.9 269 chr2R 8722764 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723033 intron CG14767 - chr2R_6_8720001 chr2R_8720001 RAL-810 549 chr2R 8759761 8759790 chr2R 8759840 8759868 11 78 1.5 1.5 1.5 4.4 107 chr2R 8759761 intergenic CG8740 + chr2R 8759814 intergenic CG8740 + chr2R 8759868 intergenic CG8740 + chr2R_11_8755001 chr2R_8755001 RAL-810 550 chr2R 8777935 8777944 chr2R 8784138 8784148 diver 6 6203 4.5 4.0 4.2 1.2 6213 chr2R 8777935 intergenic not near genes chr2R 8781042 intergenic not near genes chr2R 8784148 intergenic not near genes chr2R_6_8780001 chr2R_8780001 RAL-810 551 chr2R 8967420 8967452 chr2R 8967567 8967597 11 147 0.0 3.0 1.5 4.4 177 chr2R 8967420 intron CG8216 - chr2R 8967508 intron CG8216 - chr2R 8967597 intron CG8216 - chr2R_11_8965001 chr2R_8965001 RAL-810 552 chr2R 8995935 8995961 chr2R 8996022 8996047 8 87 1.5 3.0 2.2 2.5 112 chr2R 8995935 exon Np - chr2R 8995991 intron Np - chr2R 8996047 intron Np - chr2R_8_8995001 chr2R_8995001 RAL-810 553 chr2R 9047426 9047434 chr2R 9047521 9047529 4 95 3.0 6.0 4.5 0.7 103 chr2R 9047426 intron CG13743 - chr2R 9047478 intron CG13743 - chr2R 9047529 intron CG13743 - chr2R_4_9045001 chr2R_9045001 RAL-810 554 chr2R 9052706 9052739 chr2R 9052787 9052820 6 81 1.5 2.0 1.8 2.1 114 chr2R 9052706 intron CG13743 - chr2R 9052763 intron CG13743 - chr2R 9052820 intron CG13743 - chr2R_6_9050001 chr2R_9050001 RAL-810 555 chr2R 9110152 9110160 chr2R 9110237 9110249 6 88 4.5 2.5 3.5 1.3 97 chr2R 9110152 intergenic Pmm45A - chr2R 9110200 intergenic Pmm45A - chr2R 9110249 intergenic not near genes chr2R_6_9110001 chr2R_9110001 RAL-810 556 chr2R 9151305 9151335 chr2R 9157775 9157805 Burdock 14 6470 4.5 4.5 4.5 2.5 6500 chr2R 9151305 3` UTR CG30345 + chr2R 9154555 intergenic not near genes chr2R 9157805 intergenic CG8008 - chr2R_14_9150001 chr2R_9150001 RAL-810 557 chr2R 9198557 9198831 chr2R 9198638 9198936 21 96 3.0 0.0 1.5 8.4 379 chr2R 9198557 intron unpg + chr2R 9198746 intron unpg + chr2R 9198936 intron unpg + chr2R_21_9195001 chr2R_9195001 RAL-810 558 chr2R 9212692 9212721 chr2R 9213178 9213205 roo 11 485 3.0 1.5 2.2 3.4 513 chr2R 9212692 intergenic CR45309 + chr2R 9212948 intergenic CR45309 + chr2R 9213205 5` UTR CR45309 + chr2R_11_9210001 chr2R_9210001 RAL-810 559 chr2R 9262779 9262801 chr2R 9262863 9262887 4 85 2.5 2.5 2.5 1.1 108 chr2R 9262779 intron,exon Pkn -,CG34141 - chr2R 9262833 intron,exon Pkn -,CG34141 - chr2R 9262887 intron,5` UTR Pkn -,CG34141 - chr2R_4_9260001 chr2R_9260001 RAL-810 560 chr2R 9264049 9264080 chr2R 9264147 9264163 5 93 4.5 2.5 3.5 1.1 114 chr2R 9264049 intron Pkn - chr2R 9264106 intron Pkn - chr2R 9264163 intron Pkn - chr2R_5_9260001 chr2R_9260001 RAL-810 561 chr2R 9368136 9368150 chr2R 9368207 9368222 5 74 3.0 0.0 1.5 2.0 86 chr2R 9368136 intron CG13954 - chr2R 9368179 intron CG13954 - chr2R 9368222 intron CG13954 - chr2R_5_9365001 chr2R_9365001 RAL-810 562 chr2R 9390882 9390917 chr2R 9390968 9391003 6 86 2.5 0.5 1.5 2.4 121 chr2R 9390882 exon l(2)03659 + chr2R 9390942 intron l(2)03659 + chr2R 9391003 exon l(2)03659 + chr2R_6_9390001 chr2R_9390001 RAL-810 563 chr2R 9480083 9480105 chr2R 9490609 9490636 roo 6 10530 2.0 3.5 2.8 1.6 10553 chr2R 9480083 intergenic not near genes chr2R 9485360 intergenic not near genes chr2R 9490636 intergenic not near genes chr2R_6_9485001 chr2R_9485001 RAL-810 564 chr2R 9510665 9510693 chr2R 9510780 9510808 6 116 0.0 1.0 0.5 4.0 143 chr2R 9510665 intron brp + chr2R 9510736 intron brp + chr2R 9510808 intron brp + chr2R_6_9510001 chr2R_9510001 RAL-810 565 chr2R 9629593 9629618 chr2R 9629774 9629799 7 181 3.0 3.0 3.0 1.8 206 chr2R 9629593 intron Mmp2 - chr2R 9629696 intron Mmp2 - chr2R 9629799 intron Mmp2 - chr2R_7_9625001 chr2R_9625001 RAL-810 566 chr2R 9669135 9669170 chr2R 9669236 9669271 10 99 3.5 3.0 3.2 2.4 136 chr2R 9669135 intron Mmp2 - chr2R 9669203 intron Mmp2 - chr2R 9669271 intron Mmp2 - chr2R_10_9665001 chr2R_9665001 RAL-810 567 chr2R 9726610 9726641 chr2R 9734161 9734192 17.6 13 7551 3.0 2.0 2.5 3.7 7582 chr2R 9726610 intron sqa - chr2R 9730401 intron sqa - chr2R 9734192 intron sqa - chr2R_13_9730001 chr2R_9730001 RAL-810 568 chr2R 9950296 9950327 chr2R 9950373 9950404 9 77 3.0 0.5 1.8 3.2 108 chr2R 9950296 intron Mef2 - chr2R 9950350 intron Mef2 - chr2R 9950404 intron Mef2 - chr2R_9_9950001 chr2R_9950001 RAL-810 569 chr2R 10017645 10017681 chr2R 10017724 10017760 10 78 1.0 0.5 0.8 5.6 115 chr2R 10017645 intron Pka-R2 - chr2R 10017702 intron Pka-R2 - chr2R 10017760 intron Pka-R2 - chr2R_10_10015001 chr2R_10015001 RAL-810 570 chr2R 10144264 10144285 chr2R 10147299 10147323 4 3038 12.0 13.5 12.8 0.3 3059 chr2R 10144264 exon CG18011 + chr2R 10145794 exon CG18011 + chr2R 10147323 exon KCNQ - chr2R_4_10145001 chr2R_10145001 RAL-810 571 chr2R 10176877 10176910 chr2R 10186044 10186077 roo 9 9167 3.5 3.0 3.2 2.1 9200 chr2R 10176877 intron KCNQ - chr2R 10181477 intron KCNQ - chr2R 10186077 intron KCNQ - chr2R_9_10180001 chr2R_10180001 RAL-810 572 chr2R 10203640 10203656 chr2R 10203725 10203741 5 85 3.5 2.0 2.8 1.3 101 chr2R 10203640 intergenic not near genes chr2R 10203690 intergenic not near genes chr2R 10203741 intergenic not near genes chr2R_5_10200001 chr2R_10200001 RAL-810 573 chr2R 10313315 10313347 chr2R 10313403 10313435 8 88 0.5 3.0 1.8 2.9 120 chr2R 10313315 intergenic not near genes chr2R 10313375 intergenic not near genes chr2R 10313435 intergenic Ndg + chr2R_8_10310001 chr2R_10310001 RAL-810 574 chr2R 10352688 10352704 chr2R 10352748 10352781 4 73 0.5 2.5 1.5 1.6 93 chr2R 10352688 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352734 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352781 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_4_10350001 chr2R_10350001 RAL-810 575 chr2R 10409070 10409086 chr2R 10409146 10409162 5 76 1.0 4.0 2.5 1.4 92 chr2R 10409070 intron CG42732 - chr2R 10409116 intron CG42732 - chr2R 10409162 intron,exon CG42732 -,CG33477 - chr2R_5_10405001 chr2R_10405001 RAL-810 576 chr2R 10454102 10454129 chr2R 10454179 10454206 10 76 5.0 3.0 4.0 2.0 104 chr2R 10454102 intron,intron Galphao +,Cyp49a1 - chr2R 10454154 intron,intron Galphao +,Cyp49a1 - chr2R 10454206 intron,intron Galphao +,Cyp49a1 - chr2R_10_10450001 chr2R_10450001 RAL-810 577 chr2R 10469023 10469050 chr2R 10469149 10469176 15 126 1.0 3.5 2.2 4.7 153 chr2R 10469023 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469176 intron CG11777 + chr2R_15_10465001 chr2R_10465001 RAL-810 578 chr2R 10574628 10574641 chr2R 10574710 10574723 4 82 4.0 5.5 4.8 0.7 95 chr2R 10574628 intron psq + chr2R 10574676 intron psq + chr2R 10574723 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-810 579 chr2R 10585573 10585584 chr2R 10594155 10594164 Tirant 5 8582 3.0 2.5 2.8 1.3 8591 chr2R 10585573 intron psq + chr2R 10589868 intron psq + chr2R 10594164 intron psq + chr2R_5_10585001 chr2R_10585001 RAL-810 580 chr2R 10622351 10622381 chr2R 10637115 10637146 mdg1 6 14764 3.5 2.5 3.0 1.5 14795 chr2R 10622351 intron CG11883 + chr2R 10629748 intron CG11883 + chr2R 10637146 intron CG11883 + chr2R_6_10625001 chr2R_10625001 RAL-810 581 chr2R 10644061 10644090 chr2R 10644139 10644168 8 78 2.0 0.5 1.2 3.6 107 chr2R 10644061 intron Git - chr2R 10644114 intron Git - chr2R 10644168 intron Git - chr2R_8_10640001 chr2R_10640001 RAL-810 582 chr2R 10761556 10761590 chr2R 10761709 10761744 11 154 2.5 1.0 1.8 3.9 188 chr2R 10761556 intron,5` UTR CG33144 -,CR43605 + chr2R 10761650 intron,5` UTR CG33144 -,CR43605 + chr2R 10761744 intron CG33144 - chr2R_11_10760001 chr2R_10760001 RAL-810 583 chr2R 10790143 10790176 chr2R 10790231 10790264 16 88 1.5 4.0 2.8 4.2 121 chr2R 10790143 intron CG33144 - chr2R 10790204 intron CG33144 - chr2R 10790264 intron CG33144 - chr2R_16_10790001 chr2R_10790001 RAL-810 584 chr2R 10827333 10827352 chr2R 10827420 10827440 8 86 2.5 2.0 2.2 2.5 107 chr2R 10827333 exon CG12325 + chr2R 10827386 3` UTR CG12325 + chr2R 10827440 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_8_10825001 chr2R_10825001 RAL-810 585 chr2R 10873352 10873376 chr2R 10873439 10873463 7 87 2.5 3.0 2.8 1.8 111 chr2R 10873352 intron CG30015 - chr2R 10873408 intron CG30015 - chr2R 10873463 intron CG30015 - chr2R_7_10870001 chr2R_10870001 RAL-810 586 chr2R 10902154 10902162 chr2R 10902233 10902241 4 79 7.0 2.5 4.8 0.7 87 chr2R 10902154 intergenic not near genes chr2R 10902198 intergenic not near genes chr2R 10902241 intergenic not near genes chr2R_4_10900001 chr2R_10900001 RAL-810 587 chr2R 10967381 10967397 chr2R 10967559 10967573 5 177 2.5 2.5 2.5 1.4 192 chr2R 10967381 intergenic not near genes chr2R 10967477 intergenic not near genes chr2R 10967573 intergenic not near genes chr2R_5_10965001 chr2R_10965001 RAL-810 588 chr2R 11009814 11009844 chr2R 11018987 11019016 roo 9 9172 3.0 1.5 2.2 2.8 9202 chr2R 11009814 intron luna - chr2R 11014415 intron luna - chr2R 11019016 intron luna - chr2R_9_11010001 chr2R_11010001 RAL-810 589 chr2R 11019887 11019905 chr2R 11024951 11024971 jockey 5 5062 3.0 2.0 2.5 1.4 5084 chr2R 11019887 intron luna - chr2R 11022429 intron luna - chr2R 11024971 intron luna - chr2R_5_11020001 chr2R_11020001 RAL-810 590 chr2R 11171528 11171558 chr2R 11171685 11171715 8 157 5.5 2.5 4.0 1.6 187 chr2R 11171528 intron,intron CG13229 -,shn + chr2R 11171622 intron,intron CG13229 -,shn + chr2R 11171715 intron,intron CG13229 -,shn + chr2R_8_11170001 chr2R_11170001 RAL-810 591 chr2R 11179269 11179281 chr2R 11179354 11179367 5 86 8.5 6.5 7.5 0.6 98 chr2R 11179269 intron shn + chr2R 11179318 intron shn + chr2R 11179367 intron shn + chr2R_5_11175001 chr2R_11175001 RAL-810 592 chr2R 11202121 11202139 chr2R 11202214 11202233 5 94 4.0 4.0 4.0 1.0 112 chr2R 11202121 intron shn + chr2R 11202177 intron shn + chr2R 11202233 intron shn + chr2R_5_11200001 chr2R_11200001 RAL-810 593 chr2R 11207820 11207848 chr2R 11208013 11208041 BS 8 192 5.5 5.5 5.5 1.2 221 chr2R 11207820 intron shn + chr2R 11207930 intron shn + chr2R 11208041 intron shn + chr2R_8_11205001 chr2R_11205001 RAL-810 594 chr2R 11292970 11292997 chr2R 11293049 11293076 8 77 3.0 0.5 1.8 2.9 106 chr2R 11292970 exon,3` UTR dare -,CG30033 + chr2R 11293023 5` UTR,3` UTR dare -,CG30033 + chr2R 11293076 5` UTR,3` UTR dare -,CG30033 + chr2R_8_11290001 chr2R_11290001 RAL-810 595 chr2R 11297616 11297649 chr2R 11301937 11301970 flea 15 4320 8.0 3.0 5.5 2.3 4354 chr2R 11297616 intergenic CG42336 - chr2R 11299793 intergenic not near genes chr2R 11301970 5` UTR CG7741 + chr2R_15_11295001 chr2R_11295001 RAL-810 596 chr2R 11344148 11344181 chr2R 11344244 11344273 7 95 0.0 2.0 1.0 3.5 125 chr2R 11344148 intergenic alphaTry - chr2R 11344210 intergenic alphaTry - chr2R 11344273 3` UTR alphaTry - chr2R_7_11340001 chr2R_11340001 RAL-810 597 chr2R 11439201 11439217 chr2R 11439269 11439292 8 73 1.5 3.0 2.2 2.5 91 chr2R 11439201 intron CG7777 + chr2R 11439246 intron CG7777 + chr2R 11439292 intron CG7777 + chr2R_8_11435001 chr2R_11435001 RAL-810 598 chr2R 11472647 11472680 chr2R 11473844 11473876 pogo 6 1197 3.0 6.5 4.8 1.0 1229 chr2R 11472647 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473876 intergenic not near genes chr2R_6_11470001 chr2R_11470001 RAL-810 599 chr2R 11568705 11568727 chr2R 11568815 11568837 6 110 1.5 3.5 2.5 1.7 132 chr2R 11568705 intergenic not near genes chr2R 11568771 intergenic not near genes chr2R 11568837 intergenic not near genes chr2R_6_11565001 chr2R_11565001 RAL-810 600 chr2R 11614625 11614800 chr2R 11614713 11614888 12 88 5.0 4.0 4.5 2.2 263 chr2R 11614625 intron tou - chr2R 11614756 intron tou - chr2R 11614888 intron tou - chr2R_12_11610001 chr2R_11610001 RAL-810 601 chr2R 11631400 11631413 chr2R 11631479 11631493 4 80 0.5 3.0 1.8 1.4 93 chr2R 11631400 intron CG9005 - chr2R 11631446 intron CG9005 - chr2R 11631493 intron CG9005 - chr2R_4_11630001 chr2R_11630001 RAL-810 602 chr2R 11822984 11822999 chr2R 11823060 11823076 5 75 0.0 1.5 0.8 2.8 92 chr2R 11822984 intergenic not near genes chr2R 11823030 intergenic not near genes chr2R 11823076 intergenic not near genes chr2R_5_11820001 chr2R_11820001 RAL-810 603 chr2R 11932561 11932571 chr2R 11932678 11932688 4 116 5.0 4.0 4.5 0.7 127 chr2R 11932561 intergenic not near genes chr2R 11932624 intergenic not near genes chr2R 11932688 intergenic not near genes chr2R_4_11930001 chr2R_11930001 RAL-810 604 chr2R 12146469 12146486 chr2R 12147591 12147603 5 1121 18.5 11.0 14.8 0.3 1134 chr2R 12146469 intron,3` UTR Hen1 +,CG8878 - chr2R 12147036 intron,exon Hen1 +,CG8878 - chr2R 12147603 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-810 605 chr2R 12145908 12145947 chr2R 12148601 12148640 5 2694 25.0 17.5 21.2 0.2 2732 chr2R 12145908 exon Hen1 + chr2R 12147274 intron,intron Hen1 +,CG8878 - chr2R 12148640 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-810 606 chr2R 12186001 12186037 chr2R 12186096 12186131 16 95 2.0 8.0 5.0 2.7 130 chr2R 12186001 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186131 intron Cyp6g1 + chr2R_16_12185001 chr2R_12185001 RAL-810 607 chr2R 12187471 12187506 chr2R 12190093 12190124 11 2619 42.0 22.0 32.0 0.3 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_11_12185001 chr2R_12185001 RAL-810 608 chr2R 12217577 12217599 chr2R 12217658 12217678 5 79 0.0 3.0 1.5 2.0 101 chr2R 12217577 intergenic not near genes chr2R 12217628 intergenic not near genes chr2R 12217678 intergenic not near genes chr2R_5_12215001 chr2R_12215001 RAL-810 609 chr2R 12284304 12284328 chr2R 12284388 12284412 6 84 0.0 4.5 2.2 1.9 108 chr2R 12284304 intron CG42700 + chr2R 12284358 intron CG42700 + chr2R 12284412 intron CG42700 + chr2R_6_12280001 chr2R_12280001 RAL-810 610 chr2R 12334889 12334901 chr2R 12334967 12334979 7 77 4.0 6.5 5.2 1.1 90 chr2R 12334889 intergenic CG8490 + chr2R 12334934 intergenic CG8490 + chr2R 12334979 intergenic CG8490 + chr2R_7_12330001 chr2R_12330001 RAL-810 611 chr2R 12362902 12362908 chr2R 12362991 12362997 6 89 6.0 8.0 7.0 0.8 95 chr2R 12362902 3` UTR CG30043 + chr2R 12362950 3` UTR CG30043 + chr2R 12362997 3` UTR CG30043 + chr2R_6_12360001 chr2R_12360001 RAL-810 612 chr2R 12501696 12501722 chr2R 12503857 12503864 Rt1c 5 2158 0.5 1.5 1.0 2.5 2168 chr2R 12501696 intron fdl - chr2R 12502780 intron fdl - chr2R 12503864 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-810 613 chr2R 12535850 12535871 chr2R 12535921 12535946 7 77 4.0 2.0 3.0 1.8 96 chr2R 12535850 intron fra + chr2R 12535898 intron fra + chr2R 12535946 intron fra + chr2R_7_12535001 chr2R_12535001 RAL-810 614 chr2R 12707519 12707548 chr2R 12715885 12715914 roo 12 8366 2.0 4.0 3.0 3.0 8395 chr2R 12707519 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715914 intron CG42663 + chr2R_12_12710001 chr2R_12710001 RAL-810 615 chr2R 12771322 12771348 chr2R 12771431 12771457 12 109 2.0 2.5 2.2 3.8 135 chr2R 12771322 intergenic not near genes chr2R 12771390 intergenic not near genes chr2R 12771457 intergenic not near genes chr2R_12_12770001 chr2R_12770001 RAL-810 616 chr2R 12819459 12819478 chr2R 12824528 12824546 jockey 5 5069 2.5 5.0 3.8 1.0 5087 chr2R 12819459 intergenic not near genes chr2R 12822002 intergenic not near genes chr2R 12824546 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-810 617 chr2R 12897407 12897438 chr2R 12897512 12897543 11 105 2.0 3.0 2.5 3.1 136 chr2R 12897407 intron vg + chr2R 12897475 intron vg + chr2R 12897543 intron vg + chr2R_11_12895001 chr2R_12895001 RAL-810 618 chr2R 12988278 12988425 chr2R 12988390 12988529 9 105 0.0 0.0 0.0 9.0 251 chr2R 12988278 intergenic not near genes chr2R 12988404 intergenic not near genes chr2R 12988529 intergenic not near genes chr2R_9_12985001 chr2R_12985001 RAL-810 619 chr2R 13009890 13009912 chr2R 13009970 13009992 10 80 3.0 0.5 1.8 3.6 102 chr2R 13009890 intergenic not near genes chr2R 13009941 intergenic not near genes chr2R 13009992 intergenic not near genes chr2R_10_13005001 chr2R_13005001 RAL-810 620 chr2R 13136853 13136869 chr2R 13141651 13141667 Doc 5 4797 3.0 5.0 4.0 1.0 4814 chr2R 13136853 exon Cap-G + chr2R 13139260 intron Cap-G + chr2R 13141667 intron Cap-G + chr2R_5_13135001 chr2R_13135001 RAL-810 621 chr2R 13167431 13167456 chr2R 13167525 13167550 5 94 5.5 0.0 2.8 1.3 119 chr2R 13167431 intron GLaz - chr2R 13167490 intron GLaz - chr2R 13167550 intron GLaz - chr2R_5_13165001 chr2R_13165001 RAL-810 622 chr2R 13240915 13240939 chr2R 13240993 13241017 8 78 2.0 4.0 3.0 2.0 102 chr2R 13240915 3` UTR GstE14 + chr2R 13240966 3` UTR GstE14 + chr2R 13241017 intergenic GstE14 + chr2R_8_13240001 chr2R_13240001 RAL-810 623 chr2R 13258556 13258586 chr2R 13259802 13259832 8 1246 1.0 5.5 3.2 1.9 1276 chr2R 13258556 intergenic CG10799 + chr2R 13259194 intergenic not near genes chr2R 13259832 intergenic CG42319 + chr2R_8_13255001 chr2R_13255001 RAL-810 624 chr2R 13309662 13309682 chr2R 13309780 13309800 10 118 2.5 0.0 1.2 4.5 138 chr2R 13309662 intergenic not near genes chr2R 13309731 intergenic not near genes chr2R 13309800 intergenic not near genes chr2R_10_13305001 chr2R_13305001 RAL-810 625 chr2R 13431489 13431515 chr2R 13431568 13431594 11 79 6.0 2.0 4.0 2.2 105 chr2R 13431489 intron CG42321 - chr2R 13431542 intron CG42321 - chr2R 13431594 intron CG42321 - chr2R_11_13430001 chr2R_13430001 RAL-810 626 chr2R 13439108 13439225 chr2R 13439223 13439301 7 126 0.0 0.0 0.0 7.0 193 chr2R 13439108 intergenic CG42321 -,cnn - chr2R 13439204 intergenic cnn -,CG42321 - chr2R 13439301 intergenic cnn -,CG42321 - chr2R_7_13435001 chr2R_13435001 RAL-810 627 chr2R 13532519 13532523 chr2R 13532635 13532639 4 116 2.0 3.5 2.8 1.1 120 chr2R 13532519 intron Vmat - chr2R 13532579 intron Vmat - chr2R 13532639 intron Vmat - chr2R_4_13530001 chr2R_13530001 RAL-810 628 chr2R 13554742 13554773 chr2R 13554827 13554858 6 85 0.0 2.0 1.0 3.0 116 chr2R 13554742 intron Roe1 + chr2R 13554800 intron Roe1 + chr2R 13554858 intron Roe1 + chr2R_6_13550001 chr2R_13550001 RAL-810 629 chr2R 13566258 13566291 chr2R 13566338 13566371 11 79 3.5 0.0 1.8 3.9 113 chr2R 13566258 intergenic not near genes chr2R 13566314 intergenic not near genes chr2R 13566371 intergenic not near genes chr2R_11_13565001 chr2R_13565001 RAL-810 630 chr2R 13577434 13577466 chr2R 13577511 13577543 7 76 2.0 2.5 2.2 2.2 109 chr2R 13577434 5` UTR CR44365 + chr2R 13577488 5` UTR CR44365 + chr2R 13577543 5` UTR CR44365 + chr2R_7_13575001 chr2R_13575001 RAL-810 631 chr2R 13580503 13580530 chr2R 13580853 13580880 jockey 9 349 1.5 7.0 4.2 1.7 377 chr2R 13580503 3` UTR CG6191 - chr2R 13580692 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580880 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_9_13580001 chr2R_13580001 RAL-810 632 chr2R 13677855 13677858 chr2R 13677935 13677938 4 80 1.5 5.0 3.2 1.0 83 chr2R 13677855 intron fas + chr2R 13677896 intron fas + chr2R 13677938 intron fas + chr2R_4_13675001 chr2R_13675001 RAL-810 633 chr2R 13692315 13692343 chr2R 13692399 13692427 4 83 5.5 0.5 3.0 1.0 112 chr2R 13692315 intron,intron fas +,CG6220 - chr2R 13692371 intron,intron fas +,CG6220 - chr2R 13692427 intron,intron fas +,CG6220 - chr2R_4_13690001 chr2R_13690001 RAL-810 634 chr2R 13738909 13738938 chr2R 13739000 13739029 8 91 0.0 3.0 1.5 3.2 120 chr2R 13738909 intron fas + chr2R 13738969 intron fas + chr2R 13739029 intron fas + chr2R_8_13735001 chr2R_13735001 RAL-810 635 chr2R 13752825 13752831 chr2R 13752923 13752929 4 98 0.5 4.0 2.2 1.2 104 chr2R 13752825 intergenic not near genes chr2R 13752877 intergenic not near genes chr2R 13752929 intergenic not near genes chr2R_4_13750001 chr2R_13750001 RAL-810 636 chr2R 13768983 13768996 chr2R 13769082 13769095 4 99 1.0 2.0 1.5 1.6 112 chr2R 13768983 intergenic not near genes chr2R 13769039 intergenic not near genes chr2R 13769095 intergenic not near genes chr2R_4_13765001 chr2R_13765001 RAL-810 637 chr2R 14000230 14000264 chr2R 14000458 14000492 19 228 1.5 3.0 2.2 5.9 262 chr2R 14000230 intron mam + chr2R 14000361 intron mam + chr2R 14000492 intron mam + chr2R_19_14000001 chr2R_14000001 RAL-810 638 chr2R 14018158 14018184 chr2R 14018242 14018268 11 84 3.5 3.0 3.2 2.6 110 chr2R 14018158 intron mam + chr2R 14018213 intron mam + chr2R 14018268 intron mam + chr2R_11_14015001 chr2R_14015001 RAL-810 639 chr2R 14133651 14133681 chr2R 14133811 14133840 5 160 4.5 2.0 3.2 1.2 189 chr2R 14133651 intron Prosap - chr2R 14133746 intron Prosap - chr2R 14133840 intron Prosap - chr2R_5_14130001 chr2R_14130001 RAL-810 640 chr2R 14168369 14168398 chr2R 14168458 14168487 12 88 2.5 3.0 2.8 3.2 118 chr2R 14168369 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168428 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168487 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_12_14165001 chr2R_14165001 RAL-810 641 chr2R 14277579 14277610 chr2R 14277659 14277691 9 82 2.5 5.0 3.8 1.9 112 chr2R 14277579 5` UTR Ih + chr2R 14277635 5` UTR Ih + chr2R 14277691 5` UTR Ih + chr2R_9_14275001 chr2R_14275001 RAL-810 642 chr2R 14294828 14294857 chr2R 14294908 14294937 13 79 3.0 4.0 3.5 2.9 109 chr2R 14294828 intron Ih + chr2R 14294882 intron Ih + chr2R 14294937 intron Ih + chr2R_13_14290001 chr2R_14290001 RAL-810 643 chr2R 14365302 14365321 chr2R 14365380 14365400 7 78 2.0 3.0 2.5 2.0 98 chr2R 14365302 exon Tfb1 + chr2R 14365351 exon Tfb1 + chr2R 14365400 3` UTR Tfb1 + chr2R_7_14365001 chr2R_14365001 RAL-810 644 chr2R 14393870 14393890 chr2R 14393955 14393975 6 84 3.5 2.5 3.0 1.5 105 chr2R 14393870 intergenic not near genes chr2R 14393922 intergenic not near genes chr2R 14393975 intergenic not near genes chr2R_6_14390001 chr2R_14390001 RAL-810 645 chr2R 14394231 14394244 chr2R 14399020 14399033 Doc 7 4789 3.0 3.0 3.0 1.8 4802 chr2R 14394231 intergenic not near genes chr2R 14396632 intergenic not near genes chr2R 14399033 intergenic not near genes chr2R_7_14395001 chr2R_14395001 RAL-810 646 chr2R 14497394 14497419 chr2R 14498560 14498585 1360 11 1166 4.0 7.0 5.5 1.7 1191 chr2R 14497394 3` UTR Cpsf160 - chr2R 14497990 intron Cpsf160 - chr2R 14498585 3` UTR Cpsf160 - chr2R_11_14495001 chr2R_14495001 RAL-810 647 chr2R 14514491 14514493 chr2R 14514583 14514602 4 97 5.5 4.5 5.0 0.7 111 chr2R 14514491 intron,intron Cpr51A -,CG30197 + chr2R 14514546 intron,intron Cpr51A -,CG30197 + chr2R 14514602 intron,intron Cpr51A -,CG30197 + chr2R_4_14510001 chr2R_14510001 RAL-810 648 chr2R 14541226 14541231 chr2R 14541483 14541488 4 257 6.0 2.5 4.2 0.8 262 chr2R 14541226 intron ttv + chr2R 14541357 intron ttv + chr2R 14541488 intron ttv + chr2R_4_14540001 chr2R_14540001 RAL-810 649 chr2R 14565557 14565589 chr2R 14565633 14565666 5 77 6.0 4.5 5.2 0.8 109 chr2R 14565557 intron ttv + chr2R 14565612 intron ttv + chr2R 14565666 intron ttv + chr2R_5_14565001 chr2R_14565001 RAL-810 650 chr2R 14610264 14610276 chr2R 14610340 14610368 4 87 2.0 2.0 2.0 1.3 104 chr2R 14610264 exon Su(var)2-HP2 - chr2R 14610316 exon Su(var)2-HP2 - chr2R 14610368 exon Su(var)2-HP2 - chr2R_4_14610001 chr2R_14610001 RAL-810 651 chr2R 14796345 14796357 chr2R 14796439 14796454 7 97 7.5 2.0 4.8 1.2 109 chr2R 14796345 intron kn - chr2R 14796400 intron kn - chr2R 14796454 intron kn - chr2R_7_14795001 chr2R_14795001 RAL-810 652 chr2R 14799868 14799895 chr2R 14799944 14799971 8 76 0.5 3.0 1.8 2.9 103 chr2R 14799868 intron kn - chr2R 14799920 intron kn - chr2R 14799971 intron kn - chr2R_8_14795001 chr2R_14795001 RAL-810 653 chr2R 14842388 14842396 chr2R 14842483 14842492 5 96 1.5 2.5 2.0 1.7 104 chr2R 14842388 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842492 intergenic NaPi-T - chr2R_5_14840001 chr2R_14840001 RAL-810 654 chr2R 14872336 14872362 chr2R 14872447 14872472 9 109 1.5 1.0 1.2 4.1 136 chr2R 14872336 exon Cyp6a22 + chr2R 14872404 exon Cyp6a22 + chr2R 14872472 exon Cyp6a22 + chr2R_9_14870001 chr2R_14870001 RAL-810 655 chr2R 14889208 14889232 chr2R 14897816 14897840 Max-element 10 8608 6.0 0.5 3.2 2.4 8632 chr2R 14889208 intergenic Cyp6a8 - chr2R 14893524 intergenic not near genes chr2R 14897840 intergenic not near genes chr2R_10_14890001 chr2R_14890001 RAL-810 656 chr2R 14911703 14911725 chr2R 14911825 14911848 9 123 1.5 1.5 1.5 3.6 145 chr2R 14911703 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911848 intron CG10249 - chr2R_9_14910001 chr2R_14910001 RAL-810 657 chr2R 15004727 15004760 chr2R 15005056 15005089 jockey 9 329 1.0 0.5 0.8 5.0 362 chr2R 15004727 intergenic not near genes chr2R 15004908 intergenic not near genes chr2R 15005089 intergenic not near genes chr2R_9_15000001 chr2R_15000001 RAL-810 658 chr2R 15015454 15015488 chr2R 15022878 15022912 mdg1 16 7424 3.0 3.0 3.0 4.0 7458 chr2R 15015454 intron hbs + chr2R 15019183 intron hbs + chr2R 15022912 intron hbs + chr2R_16_15015001 chr2R_15015001 RAL-810 659 chr2R 15065617 15065646 chr2R 15065692 15065724 5 68 2.5 1.0 1.8 1.8 107 chr2R 15065617 intergenic not near genes chr2R 15065670 intergenic not near genes chr2R 15065724 intergenic not near genes chr2R_5_15065001 chr2R_15065001 RAL-810 660 chr2R 15084982 15085003 chr2R 15092031 15092052 297 7 7049 4.0 2.5 3.2 1.7 7070 chr2R 15084982 intergenic not near genes chr2R 15088517 intergenic not near genes chr2R 15092052 5` UTR CR44457 + chr2R_7_15085001 chr2R_15085001 RAL-810 661 chr2R 15109269 15109287 chr2R 15109398 15109428 5 130 0.0 0.0 0.0 5.0 159 chr2R 15109269 intergenic not near genes chr2R 15109348 intergenic not near genes chr2R 15109428 intergenic not near genes chr2R_5_15105001 chr2R_15105001 RAL-810 662 chr2R 15196098 15196127 chr2R 15196192 15196223 6 95 0.0 3.5 1.8 2.1 125 chr2R 15196098 intergenic not near genes chr2R 15196160 intergenic not near genes chr2R 15196223 intergenic not near genes chr2R_6_15195001 chr2R_15195001 RAL-810 663 chr2R 15294679 15294707 chr2R 15294761 15294788 5 81 3.0 3.0 3.0 1.2 109 chr2R 15294679 intron,3` UTR Trpm -,CR44241 - chr2R 15294734 intron,3` UTR Trpm -,CR44241 - chr2R 15294788 intron,3` UTR Trpm -,CR44241 - chr2R_5_15290001 chr2R_15290001 RAL-810 664 chr2R 15340306 15340318 chr2R 15340383 15340394 5 77 4.5 1.0 2.8 1.3 88 chr2R 15340306 intergenic unc-5 + chr2R 15340350 intergenic unc-5 + chr2R 15340394 intergenic unc-5 + chr2R_5_15340001 chr2R_15340001 RAL-810 665 chr2R 15373845 15373878 chr2R 15374004 15374037 15 159 4.5 5.0 4.8 2.6 192 chr2R 15373845 intergenic not near genes chr2R 15373941 intergenic not near genes chr2R 15374037 intergenic not near genes chr2R_15_15370001 chr2R_15370001 RAL-810 666 chr2R 15534682 15534697 chr2R 15534758 15534776 4 78 3.5 3.0 3.2 1.0 94 chr2R 15534682 intron CG30471 + chr2R 15534729 intron CG30471 + chr2R 15534776 intron CG30471 + chr2R_4_15530001 chr2R_15530001 RAL-810 667 chr2R 15557247 15557278 chr2R 15557389 15557418 12 142 1.0 2.0 1.5 4.8 171 chr2R 15557247 intron CG12963 + chr2R 15557332 intron CG12963 + chr2R 15557418 intron CG12963 + chr2R_12_15555001 chr2R_15555001 RAL-810 668 chr2R 15655980 15656010 chr2R 15656060 15656090 6 80 2.5 2.5 2.5 1.7 110 chr2R 15655980 intron CG42524 + chr2R 15656035 intron CG42524 + chr2R 15656090 intron CG42524 + chr2R_6_15655001 chr2R_15655001 RAL-810 669 chr2R 15702957 15702967 chr2R 15703034 15703044 7 77 3.0 3.0 3.0 1.8 87 chr2R 15702957 intergenic not near genes chr2R 15703000 intergenic not near genes chr2R 15703044 intergenic not near genes chr2R_7_15700001 chr2R_15700001 RAL-810 670 chr2R 15768940 15768964 chr2R 15769017 15769036 4 71 2.0 3.0 2.5 1.1 96 chr2R 15768940 intron Zasp52 - chr2R 15768988 intron Zasp52 - chr2R 15769036 intron Zasp52 - chr2R_4_15765001 chr2R_15765001 RAL-810 671 chr2R 15840833 15840861 chr2R 15840912 15840940 9 78 2.5 5.5 4.0 1.8 107 chr2R 15840833 intron tun + chr2R 15840886 intron tun + chr2R 15840940 intron tun + chr2R_9_15840001 chr2R_15840001 RAL-810 672 chr2R 15887190 15887208 chr2R 15887296 15887311 5 105 3.5 2.5 3.0 1.2 121 chr2R 15887190 intron sli - chr2R 15887250 intron sli - chr2R 15887311 intron sli - chr2R_5_15885001 chr2R_15885001 RAL-810 673 chr2R 15911227 15911236 chr2R 15911306 15911317 8 81 3.0 4.5 3.8 1.7 90 chr2R 15911227 intron sli - chr2R 15911272 intron sli - chr2R 15911317 intron sli - chr2R_8_15910001 chr2R_15910001 RAL-810 674 chr2R 16245413 16245430 chr2R 16245507 16245524 6 94 0.0 2.0 1.0 3.0 111 chr2R 16245413 intron CngA - chr2R 16245468 intron CngA - chr2R 16245524 intron CngA - chr2R_6_16245001 chr2R_16245001 RAL-810 675 chr2R 16279394 16279410 chr2R 16279479 16279495 9 85 0.0 5.5 2.8 2.4 101 chr2R 16279394 intergenic not near genes chr2R 16279444 intergenic not near genes chr2R 16279495 intergenic not near genes chr2R_9_16275001 chr2R_16275001 RAL-810 676 chr2R 16471252 16471284 chr2R 16472340 16472371 5 1088 1.0 1.0 1.0 2.5 1119 chr2R 16471252 intergenic not near genes chr2R 16471812 intergenic not near genes chr2R 16472371 intergenic not near genes chr2R_5_16470001 chr2R_16470001 RAL-810 677 chr2R 16480748 16480783 chr2R 16480824 16480858 8 76 1.5 4.5 3.0 2.0 110 chr2R 16480748 intergenic not near genes chr2R 16480803 intergenic not near genes chr2R 16480858 intergenic not near genes chr2R_8_16480001 chr2R_16480001 RAL-810 678 chr2R 16539636 16539671 chr2R 16544845 16544880 copia 10 5209 3.0 5.5 4.2 1.9 5244 chr2R 16539636 intergenic not near genes chr2R 16542258 intergenic not near genes chr2R 16544880 intergenic not near genes chr2R_10_16540001 chr2R_16540001 RAL-810 679 chr2R 16547014 16547034 chr2R 16547094 16547114 7 79 0.0 0.0 0.0 7.0 100 chr2R 16547014 intergenic not near genes chr2R 16547064 intergenic not near genes chr2R 16547114 intergenic not near genes chr2R_7_16545001 chr2R_16545001 RAL-810 680 chr2R 16571871 16571906 chr2R 16571966 16572000 7 95 3.5 4.5 4.0 1.4 129 chr2R 16571871 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16572000 intergenic CG4927 + chr2R_7_16570001 chr2R_16570001 RAL-810 681 chr2R 16614133 16614160 chr2R 16614352 16614379 5 219 2.0 3.0 2.5 1.4 246 chr2R 16614133 intron CG5065 + chr2R 16614256 intron CG5065 + chr2R 16614379 intron CG5065 + chr2R_5_16610001 chr2R_16610001 RAL-810 682 chr2R 16617058 16617090 chr2R 16617137 16617169 17 78 1.0 1.0 1.0 8.5 111 chr2R 16617058 intron CG5065 + chr2R 16617114 intron CG5065 + chr2R 16617169 intron CG5065 + chr2R_17_16615001 chr2R_16615001 RAL-810 683 chr2R 16623334 16623353 chr2R 16623424 16623455 6 96 3.0 1.0 2.0 2.0 121 chr2R 16623334 exon CG5065 + chr2R 16623394 3` UTR CG5065 + chr2R 16623455 3` UTR CG5065 + chr2R_6_16620001 chr2R_16620001 RAL-810 684 chr2R 16740886 16740916 chr2R 16740979 16741010 7 90 2.0 2.5 2.2 2.2 124 chr2R 16740886 intergenic not near genes chr2R 16740948 intergenic not near genes chr2R 16741010 intergenic not near genes chr2R_7_16740001 chr2R_16740001 RAL-810 685 chr2R 16775657 16775671 chr2R 16775924 16775938 4 267 3.5 6.5 5.0 0.7 281 chr2R 16775657 3` UTR Arp53D + chr2R 16775798 intergenic Arp53D + chr2R 16775938 intergenic Arp53D + chr2R_4_16775001 chr2R_16775001 RAL-810 686 chr2R 16921291 16921327 chr2R 16921368 16921401 10 76 2.0 3.0 2.5 2.9 110 chr2R 16921291 intergenic not near genes chr2R 16921346 intergenic not near genes chr2R 16921401 intergenic not near genes chr2R_10_16920001 chr2R_16920001 RAL-810 687 chr2R 16981960 16982079 chr2R 16982072 16982157 8 104 0.0 0.0 0.0 8.0 197 chr2R 16981960 intron Cbp53E + chr2R 16982058 intron Cbp53E + chr2R 16982157 intron Cbp53E + chr2R_8_16980001 chr2R_16980001 RAL-810 688 chr2R 16987042 16987071 chr2R 16987163 16987192 4 121 4.0 2.0 3.0 1.0 150 chr2R 16987042 intron Cbp53E + chr2R 16987117 intron Cbp53E + chr2R 16987192 intron Cbp53E + chr2R_4_16985001 chr2R_16985001 RAL-810 689 chr2R 16993099 16993131 chr2R 16993178 16993210 7 78 1.5 0.0 0.8 3.9 111 chr2R 16993099 intron Cbp53E + chr2R 16993154 intron Cbp53E + chr2R 16993210 intron Cbp53E + chr2R_7_16990001 chr2R_16990001 RAL-810 690 chr2R 17098651 17098661 chr2R 17098740 17098750 5 88 10.0 6.0 8.0 0.6 99 chr2R 17098651 intergenic GstS1 - chr2R 17098700 intergenic GstS1 - chr2R 17098750 intergenic GstS1 - chr2R_5_17095001 chr2R_17095001 RAL-810 691 chr2R 17147242 17147270 chr2R 17152273 17152301 jockey 10 5031 1.5 4.0 2.8 2.6 5059 chr2R 17147242 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152301 intergenic not near genes chr2R_10_17145001 chr2R_17145001 RAL-810 692 chr2R 17161173 17161204 chr2R 17161258 17161289 5 85 0.5 5.5 3.0 1.2 116 chr2R 17161173 intergenic CG30457 - chr2R 17161231 intergenic CG30457 - chr2R 17161289 intergenic CG30457 - chr2R_5_17160001 chr2R_17160001 RAL-810 693 chr2R 17183457 17183460 chr2R 17183535 17183538 4 78 3.5 0.0 1.8 1.4 81 chr2R 17183457 intergenic not near genes chr2R 17183498 intergenic not near genes chr2R 17183538 intergenic not near genes chr2R_4_17180001 chr2R_17180001 RAL-810 694 chr2R 17234122 17234149 chr2R 17234711 17234738 6 589 1.0 3.0 2.0 2.0 616 chr2R 17234122 intron mbl + chr2R 17234430 intron mbl + chr2R 17234738 intron mbl + chr2R_6_17230001 chr2R_17230001 RAL-810 695 chr2R 17236519 17236539 chr2R 17241723 17241743 copia 9 5204 0.5 3.5 2.0 3.0 5224 chr2R 17236519 intron mbl + chr2R 17239131 intron mbl + chr2R 17241743 intron mbl + chr2R_9_17235001 chr2R_17235001 RAL-810 696 chr2R 17243072 17243090 chr2R 17243161 17243180 6 89 0.5 1.5 1.0 3.0 108 chr2R 17243072 intron mbl + chr2R 17243126 intron mbl + chr2R 17243180 intron mbl + chr2R_6_17240001 chr2R_17240001 RAL-810 697 chr2R 17395280 17395311 chr2R 17395358 17395389 8 78 6.0 3.5 4.8 1.4 109 chr2R 17395280 intron Sip1 + chr2R 17395334 intron Sip1 + chr2R 17395389 intron Sip1 + chr2R_8_17395001 chr2R_17395001 RAL-810 698 chr2R 17485912 17485935 chr2R 17490674 17490697 F-element 7 4762 7.5 0.0 3.8 1.5 4785 chr2R 17485912 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488304 intron NT5E-2 + chr2R 17490697 intron NT5E-2 + chr2R_7_17485001 chr2R_17485001 RAL-810 699 chr2R 17500682 17500694 chr2R 17500758 17500770 8 76 0.5 8.0 4.2 1.5 88 chr2R 17500682 intergenic not near genes chr2R 17500726 intergenic not near genes chr2R 17500770 intergenic not near genes chr2R_8_17500001 chr2R_17500001 RAL-810 700 chr2R 17637835 17637859 chr2R 17637915 17637939 9 80 1.0 2.0 1.5 3.6 104 chr2R 17637835 intron CG10936 - chr2R 17637887 intron CG10936 - chr2R 17637939 intron CG10936 - chr2R_9_17635001 chr2R_17635001 RAL-810 701 chr2R 17784029 17784049 chr2R 17784266 17784290 pogo 10 239 0.0 4.5 2.2 3.1 261 chr2R 17784029 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784290 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-810 702 chr2R 17872095 17872123 chr2R 17872182 17872210 12 87 1.0 3.5 2.2 3.8 115 chr2R 17872095 intergenic Mapmodulin - chr2R 17872152 intergenic Mapmodulin - chr2R 17872210 intergenic Mapmodulin - chr2R_12_17870001 chr2R_17870001 RAL-810 703 chr2R 17918164 17918193 chr2R 17918241 17918270 7 77 4.5 1.5 3.0 1.8 106 chr2R 17918164 intron Elk + chr2R 17918217 intron Elk + chr2R 17918270 intron Elk + chr2R_7_17915001 chr2R_17915001 RAL-810 704 chr2R 17929130 17929148 chr2R 17929222 17929241 5 92 2.5 3.0 2.8 1.3 111 chr2R 17929130 intergenic not near genes chr2R 17929186 intergenic not near genes chr2R 17929241 intergenic not near genes chr2R_5_17925001 chr2R_17925001 RAL-810 705 chr2R 17982923 17982952 chr2R 17983008 17983037 9 85 1.0 2.0 1.5 3.6 114 chr2R 17982923 intron dpr13 - chr2R 17982980 intron dpr13 - chr2R 17983037 intron dpr13 - chr2R_9_17980001 chr2R_17980001 RAL-810 706 chr2R 17997161 17997178 chr2R 17997240 17997260 4 81 4.5 2.0 3.2 1.0 99 chr2R 17997161 intron dpr13 - chr2R 17997210 intron dpr13 - chr2R 17997260 intron dpr13 - chr2R_4_17995001 chr2R_17995001 RAL-810 707 chr2R 17998021 17998055 chr2R 17998101 17998136 10 80 2.0 3.5 2.8 2.6 115 chr2R 17998021 intron dpr13 - chr2R 17998078 intron dpr13 - chr2R 17998136 intron dpr13 - chr2R_10_17995001 chr2R_17995001 RAL-810 708 chr2R 18111691 18111701 chr2R 18115559 18115568 F-element 6 3868 5.0 4.0 4.5 1.1 3877 chr2R 18111691 intergenic not near genes chr2R 18113630 intergenic not near genes chr2R 18115568 intergenic not near genes chr2R_6_18110001 chr2R_18110001 RAL-810 709 chr2R 18124338 18124372 chr2R 18124415 18124445 12 76 5.5 2.5 4.0 2.4 107 chr2R 18124338 intron stau - chr2R 18124392 intron stau - chr2R 18124445 intron stau - chr2R_12_18120001 chr2R_18120001 RAL-810 710 chr2R 18308287 18308319 chr2R 18308393 18308425 4 105 3.0 5.5 4.2 0.8 138 chr2R 18308287 intron sbb - chr2R 18308356 intron sbb - chr2R 18308425 intron sbb - chr2R_4_18305001 chr2R_18305001 RAL-810 711 chr2R 18358387 18358422 chr2R 18372599 18372634 roo 14 14211 5.0 4.0 4.5 2.5 14247 chr2R 18358387 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372634 intergenic not near genes chr2R_14_18365001 chr2R_18365001 RAL-810 712 chr2R 18398162 18398186 chr2R 18398257 18398280 5 94 3.0 1.0 2.0 1.7 118 chr2R 18398162 intron GstE10 - chr2R 18398221 intron GstE10 - chr2R 18398280 intron GstE10 - chr2R_5_18395001 chr2R_18395001 RAL-810 713 chr2R 18473261 18473288 chr2R 18473345 18473372 9 83 3.0 2.0 2.5 2.6 111 chr2R 18473261 intron CG30116 - chr2R 18473316 intron CG30116 - chr2R 18473372 intron CG30116 - chr2R_9_18470001 chr2R_18470001 RAL-810 714 chr2R 18479055 18479086 chr2R 18479134 18479164 6 78 2.0 3.0 2.5 1.7 109 chr2R 18479055 intron CG30116 - chr2R 18479110 intron CG30116 - chr2R 18479164 intron CG30116 - chr2R_6_18475001 chr2R_18475001 RAL-810 715 chr2R 18483029 18483057 chr2R 18483268 18483283 9 236 1.0 4.0 2.5 2.6 254 chr2R 18483029 intron CG30116 - chr2R 18483156 intron CG30116 - chr2R 18483283 intron CG30116 - chr2R_9_18480001 chr2R_18480001 RAL-810 716 chr2R 18513316 18513345 chr2R 18513398 18513427 11 82 2.0 3.0 2.5 3.1 111 chr2R 18513316 intergenic not near genes chr2R 18513372 intergenic not near genes chr2R 18513427 intergenic not near genes chr2R_11_18510001 chr2R_18510001 RAL-810 717 chr2R 18526592 18526621 chr2R 18526674 18526703 8 81 3.5 2.0 2.8 2.1 111 chr2R 18526592 intergenic CG43066 + chr2R 18526648 intergenic CG43066 + chr2R 18526703 intergenic CG43066 + chr2R_8_18525001 chr2R_18525001 RAL-810 718 chr2R 18575154 18575163 chr2R 18575371 18575380 4 217 0.0 4.0 2.0 1.3 226 chr2R 18575154 intron GEFmeso - chr2R 18575267 intron GEFmeso - chr2R 18575380 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 RAL-810 719 chr2R 18575803 18575825 chr2R 18581991 18582013 3S18 8 6187 3.5 1.5 2.5 2.3 6210 chr2R 18575803 intron GEFmeso - chr2R 18578908 intron GEFmeso - chr2R 18582013 intron GEFmeso - chr2R_8_18575001 chr2R_18575001 RAL-810 720 chr2R 18590866 18590899 chr2R 18600017 18600051 roo 6 9152 1.0 1.5 1.2 2.7 9185 chr2R 18590866 intron GEFmeso - chr2R 18595458 intron GEFmeso - chr2R 18600051 intron GEFmeso - chr2R_6_18595001 chr2R_18595001 RAL-810 721 chr2R 18657695 18657720 chr2R 18657962 18657993 13 272 2.0 5.5 3.8 2.7 298 chr2R 18657695 intron SP2637 - chr2R 18657844 intron SP2637 - chr2R 18657993 intron SP2637 - chr2R_13_18655001 chr2R_18655001 RAL-810 722 chr2R 18678525 18678537 chr2R 18678645 18678657 4 120 2.0 0.0 1.0 2.0 132 chr2R 18678525 intergenic CG44434 -,CG44435 - chr2R 18678591 intergenic CG44434 -,CG44435 - chr2R 18678657 intergenic CG44434 -,CG44435 - chr2R_4_18675001 chr2R_18675001 RAL-810 723 chr2R 18692902 18692917 chr2R 18692989 18693004 5 87 3.0 1.0 2.0 1.7 102 chr2R 18692902 intron Sik3 + chr2R 18692953 intron Sik3 + chr2R 18693004 intron Sik3 + chr2R_5_18690001 chr2R_18690001 RAL-810 724 chr2R 18713235 18713272 chr2R 18713312 18713349 10 77 0.5 3.0 1.8 3.6 114 chr2R 18713235 intergenic not near genes chr2R 18713292 intergenic not near genes chr2R 18713349 intergenic not near genes chr2R_10_18710001 chr2R_18710001 RAL-810 725 chr2R 18734750 18734779 chr2R 18734836 18734865 5 82 2.5 2.0 2.2 1.6 115 chr2R 18734750 intron Hs3st-A + chr2R 18734808 intron Hs3st-A + chr2R 18734865 intron Hs3st-A + chr2R_5_18730001 chr2R_18730001 RAL-810 726 chr2R 18745096 18745102 chr2R 18745200 18745207 4 105 0.0 6.0 3.0 1.0 111 chr2R 18745096 intron Hs3st-A + chr2R 18745152 intron Hs3st-A + chr2R 18745207 intron Hs3st-A + chr2R_4_18745001 chr2R_18745001 RAL-810 727 chr2R 18778212 18778228 chr2R 18778302 18778318 5 89 4.0 3.5 3.8 1.0 106 chr2R 18778212 intergenic not near genes chr2R 18778265 intergenic not near genes chr2R 18778318 intergenic not near genes chr2R_5_18775001 chr2R_18775001 RAL-810 728 chr2R 18785915 18785949 chr2R 18785994 18786028 6 77 2.0 3.0 2.5 1.7 113 chr2R 18785915 intron CG15080 + chr2R 18785972 intron CG15080 + chr2R 18786028 intron CG15080 + chr2R_6_18785001 chr2R_18785001 RAL-810 729 chr2R 18808063 18808087 chr2R 18808152 18808176 12 89 0.0 0.0 0.0 12.0 113 chr2R 18808063 intergenic CG15096 - chr2R 18808120 intergenic CG15096 - chr2R 18808176 intergenic CG15096 - chr2R_12_18805001 chr2R_18805001 RAL-810 730 chr2R 18819061 18819067 chr2R 18819137 18819144 5 77 0.5 1.0 0.8 2.8 83 chr2R 18819061 intergenic Phb2 + chr2R 18819102 intergenic Phb2 + chr2R 18819144 intergenic Phb2 + chr2R_5_18815001 chr2R_18815001 RAL-810 731 chr2R 18876705 18876731 chr2R 18876788 18876822 8 89 2.0 3.5 2.8 2.1 117 chr2R 18876705 intergenic not near genes chr2R 18876764 intergenic not near genes chr2R 18876822 intergenic not near genes chr2R_8_18875001 chr2R_18875001 RAL-810 732 chr2R 18883089 18883113 chr2R 18883168 18883192 7 79 1.0 2.0 1.5 2.8 103 chr2R 18883089 intron sano + chr2R 18883140 intron sano + chr2R 18883192 intron sano + chr2R_7_18880001 chr2R_18880001 RAL-810 733 chr2R 18924266 18924302 chr2R 18924349 18924382 6 81 0.5 1.5 1.0 3.0 116 chr2R 18924266 intron sano + chr2R 18924324 intron sano + chr2R 18924382 intron sano + chr2R_6_18920001 chr2R_18920001 RAL-810 734 chr2R 18926506 18926530 chr2R 18926593 18926617 10 87 2.0 2.5 2.2 3.1 111 chr2R 18926506 intron sano + chr2R 18926562 intron sano + chr2R 18926617 intron sano + chr2R_10_18925001 chr2R_18925001 RAL-810 735 chr2R 18953161 18953189 chr2R 18953248 18953276 6 87 1.5 1.5 1.5 2.4 115 chr2R 18953161 intron sano + chr2R 18953218 intron sano + chr2R 18953276 intron sano + chr2R_6_18950001 chr2R_18950001 RAL-810 736 chr2R 18989017 18989042 chr2R 18989095 18989120 8 78 2.5 3.0 2.8 2.1 103 chr2R 18989017 intron tn + chr2R 18989068 intron tn + chr2R 18989120 intron tn + chr2R_8_18985001 chr2R_18985001 RAL-810 737 chr2R 19010747 19010772 chr2R 19010860 19010868 5 111 1.5 4.0 2.8 1.3 121 chr2R 19010747 intergenic not near genes chr2R 19010808 intergenic not near genes chr2R 19010868 intergenic not near genes chr2R_5_19010001 chr2R_19010001 RAL-810 738 chr2R 19012940 19012968 chr2R 19013034 19013061 9 93 3.0 2.0 2.5 2.6 121 chr2R 19012940 intergenic not near genes chr2R 19013000 intergenic not near genes chr2R 19013061 intergenic not near genes chr2R_9_19010001 chr2R_19010001 RAL-810 739 chr2R 19026958 19026991 chr2R 19027037 19027070 5 79 3.0 0.0 1.5 2.0 112 chr2R 19026958 intron 5-HT1B - chr2R 19027014 intron 5-HT1B - chr2R 19027070 intron 5-HT1B - chr2R_5_19025001 chr2R_19025001 RAL-810 740 chr2R 19067726 19067752 chr2R 19067801 19067828 10 76 1.0 0.0 0.5 6.7 102 chr2R 19067726 intron 5-HT1A + chr2R 19067777 intron 5-HT1A + chr2R 19067828 intron 5-HT1A + chr2R_10_19065001 chr2R_19065001 RAL-810 741 chr2R 19177871 19177902 chr2R 19177950 19177957 7 75 0.5 4.0 2.2 2.2 86 chr2R 19177871 3` UTR CG10737 + chr2R 19177914 3` UTR CG10737 + chr2R 19177957 3` UTR CG10737 + chr2R_7_19175001 chr2R_19175001 RAL-810 742 chr2R 19300967 19300993 chr2R 19301050 19301076 14 83 0.5 2.0 1.2 6.4 109 chr2R 19300967 intron Tab2 + chr2R 19301022 intron Tab2 + chr2R 19301076 intron Tab2 + chr2R_14_19300001 chr2R_19300001 RAL-810 743 chr2R 19363191 19363202 chr2R 19363267 19363278 4 76 0.0 0.0 0.0 4.0 87 chr2R 19363191 intergenic CG10051 + chr2R 19363234 intergenic CG10051 + chr2R 19363278 intergenic CG10051 + chr2R_4_19360001 chr2R_19360001 RAL-810 744 chr2R 19536465 19536493 chr2R 19536547 19536575 8 82 5.0 2.0 3.5 1.8 110 chr2R 19536465 intron sm - chr2R 19536520 intron sm - chr2R 19536575 intron sm - chr2R_8_19535001 chr2R_19535001 RAL-810 745 chr2R 19575568 19575580 chr2R 19575646 19575658 5 78 4.5 3.5 4.0 1.0 90 chr2R 19575568 intron sm - chr2R 19575613 intron sm - chr2R 19575658 intron sm - chr2R_5_19575001 chr2R_19575001 RAL-810 746 chr2R 19588747 19588778 chr2R 19588825 19588856 7 78 2.0 2.0 2.0 2.3 109 chr2R 19588747 intron sm - chr2R 19588802 intron sm - chr2R 19588856 intron sm - chr2R_7_19585001 chr2R_19585001 RAL-810 747 chr2R 19714706 19714729 chr2R 19714782 19714805 7 76 0.5 3.0 1.8 2.5 99 chr2R 19714706 3` UTR CG8517 + chr2R 19714756 3` UTR CG8517 + chr2R 19714805 3` UTR CG8517 + chr2R_7_19710001 chr2R_19710001 RAL-810 748 chr2R 19776614 19776626 chr2R 19779921 19779948 jockey 4 3319 0.0 6.0 3.0 1.0 3334 chr2R 19776614 intergenic not near genes chr2R 19778281 intergenic not near genes chr2R 19779948 intergenic not near genes chr2R_4_19775001 chr2R_19775001 RAL-810 749 chr2R 19957455 19957462 chr2R 19962636 19962664 copia 4 5197 0.0 3.5 1.8 1.4 5209 chr2R 19957455 intergenic CG44623 + chr2R 19960060 intergenic not near genes chr2R 19962664 intergenic not near genes chr2R_4_19960001 chr2R_19960001 RAL-810 750 chr2R 20031907 20031940 chr2R 20032003 20032036 13 96 3.5 1.0 2.2 4.1 129 chr2R 20031907 intergenic not near genes chr2R 20031972 intergenic not near genes chr2R 20032036 intergenic not near genes chr2R_13_20030001 chr2R_20030001 RAL-810 751 chr2R 20080600 20080623 chr2R 20080677 20080700 7 77 0.0 2.0 1.0 3.5 100 chr2R 20080600 intergenic not near genes chr2R 20080650 intergenic not near genes chr2R 20080700 intergenic not near genes chr2R_7_20080001 chr2R_20080001 RAL-810 752 chr2R 20194695 20194710 chr2R 20195088 20195101 4 390 2.0 2.5 2.2 1.2 406 chr2R 20194695 intergenic not near genes chr2R 20194898 intergenic not near genes chr2R 20195101 intergenic not near genes chr2R_4_20190001 chr2R_20190001 RAL-810 753 chr2R 20338759 20338785 chr2R 20338839 20338863 7 80 2.5 0.0 1.2 3.2 104 chr2R 20338759 intergenic not near genes chr2R 20338811 intergenic not near genes chr2R 20338863 intergenic not near genes chr2R_7_20335001 chr2R_20335001 RAL-810 754 chr2R 20509016 20509042 chr2R 20509249 20509275 13 233 2.5 0.5 1.5 5.2 259 chr2R 20509016 intergenic CR44646 +,CR44647 + chr2R 20509146 intergenic CR44647 +,CR44646 + chr2R 20509275 intergenic CR44647 +,CR44646 + chr2R_13_20505001 chr2R_20505001 RAL-810 755 chr2R 20509363 20509397 chr2R 20509743 20509757 10 377 3.5 1.5 2.5 2.9 394 chr2R 20509363 intergenic CR44647 + chr2R 20509560 5` UTR CR44647 + chr2R 20509757 intergenic CR44647 + chr2R_10_20505001 chr2R_20505001 RAL-810 756 chr2R 20510337 20510362 chr2R 20510661 20510685 8 324 1.5 2.0 1.8 2.9 348 chr2R 20510337 intergenic not near genes chr2R 20510511 intergenic not near genes chr2R 20510685 intergenic CR44648 + chr2R_8_20510001 chr2R_20510001 RAL-810 757 chr2R 20541991 20542017 chr2R 20542069 20542095 9 77 1.5 3.0 2.2 2.8 104 chr2R 20541991 intergenic not near genes chr2R 20542043 intergenic not near genes chr2R 20542095 intergenic not near genes chr2R_9_20540001 chr2R_20540001 RAL-810 758 chr2R 20557255 20557276 chr2R 20557331 20557352 8 76 3.0 4.0 3.5 1.8 97 chr2R 20557255 intron lms + chr2R 20557304 intron lms + chr2R 20557352 intron lms + chr2R_8_20555001 chr2R_20555001 RAL-810 759 chr2R 20571297 20571303 chr2R 20571396 20571402 5 99 2.5 0.0 1.2 2.3 105 chr2R 20571297 intron qsm - chr2R 20571350 intron qsm - chr2R 20571402 intron qsm - chr2R_5_20570001 chr2R_20570001 RAL-810 760 chr2R 20578676 20578685 chr2R 20578764 20578774 4 89 0.0 6.0 3.0 1.0 98 chr2R 20578676 intron qsm - chr2R 20578725 intron qsm - chr2R 20578774 intron qsm - chr2R_4_20575001 chr2R_20575001 RAL-810 761 chr2R 20592581 20592600 chr2R 20592662 20592680 4 80 1.0 1.5 1.2 1.8 99 chr2R 20592581 intron bl + chr2R 20592630 intron bl + chr2R 20592680 intron bl + chr2R_4_20590001 chr2R_20590001 RAL-810 762 chr2R 20690475 20690492 chr2R 20690559 20690578 7 86 0.5 1.5 1.0 3.5 103 chr2R 20690475 intergenic not near genes chr2R 20690526 intergenic not near genes chr2R 20690578 intergenic not near genes chr2R_7_20690001 chr2R_20690001 RAL-810 763 chr2R 20702666 20702703 chr2R 20702742 20702778 10 75 3.0 2.5 2.8 2.6 112 chr2R 20702666 intron dpr + chr2R 20702722 intron dpr + chr2R 20702778 intron dpr + chr2R_10_20700001 chr2R_20700001 RAL-810 764 chr2R 20739441 20739476 chr2R 20744209 20744244 F-element 5 4768 4.0 2.0 3.0 1.2 4803 chr2R 20739441 intron dpr + chr2R 20741842 intron dpr + chr2R 20744244 intron dpr + chr2R_5_20740001 chr2R_20740001 RAL-810 765 chr2R 20812255 20812279 chr2R 20812335 20812359 10 78 3.5 2.0 2.8 2.6 104 chr2R 20812255 intergenic not near genes chr2R 20812307 intergenic not near genes chr2R 20812359 intergenic not near genes chr2R_10_20810001 chr2R_20810001 RAL-810 766 chr2R 20962909 20962937 chr2R 20963007 20963035 7 98 2.5 1.5 2.0 2.3 126 chr2R 20962909 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963035 intergenic not near genes chr2R_7_20960001 chr2R_20960001 RAL-810 767 chr2R 21040863 21040888 chr2R 21040935 21040964 5 75 2.5 2.0 2.2 1.6 101 chr2R 21040863 intergenic not near genes chr2R 21040914 intergenic not near genes chr2R 21040964 intergenic not near genes chr2R_5_21040001 chr2R_21040001 RAL-810 768 chr2R 21079976 21079992 chr2R 21080059 21080075 5 83 5.5 1.0 3.2 1.2 99 chr2R 21079976 intron Treh + chr2R 21080026 intron Treh + chr2R 21080075 intron Treh + chr2R_5_21080001 chr2R_21080001 RAL-810 769 chr2R 21103540 21103553 chr2R 21103619 21103625 5 77 5.0 0.5 2.8 1.3 85 chr2R 21103540 intron ktub + chr2R 21103582 intron ktub + chr2R 21103625 intron ktub + chr2R_5_21100001 chr2R_21100001 RAL-810 770 chr2R 21151119 21151146 chr2R 21153752 21153779 opus 7 2633 7.0 2.0 4.5 1.3 2660 chr2R 21151119 intron CG30389 - chr2R 21152449 intron CG30389 - chr2R 21153779 intron CG30389 - chr2R_7_21150001 chr2R_21150001 RAL-810 771 chr2R 21188218 21188235 chr2R 21188298 21188313 6 80 5.0 2.5 3.8 1.2 95 chr2R 21188218 exon tud + chr2R 21188266 intron tud + chr2R 21188313 intron tud + chr2R_6_21185001 chr2R_21185001 RAL-810 772 chr2R 21410373 21410381 chr2R 21410453 21410461 5 80 3.5 0.5 2.0 1.7 88 chr2R 21410373 intron Sdc - chr2R 21410417 intron Sdc - chr2R 21410461 intron Sdc - chr2R_5_21410001 chr2R_21410001 RAL-810 773 chr2R 21738290 21738311 chr2R 21747441 21747471 roo 4 9155 1.5 1.5 1.5 1.6 9181 chr2R 21738290 intergenic not near genes chr2R 21742880 intergenic not near genes chr2R 21747471 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-810 774 chr2R 21753097 21753117 chr2R 21753581 21753602 roo 10 485 2.0 2.5 2.2 3.1 505 chr2R 21753097 intergenic not near genes chr2R 21753350 intergenic not near genes chr2R 21753602 intergenic not near genes chr2R_10_21750001 chr2R_21750001 RAL-810 775 chr2R 21757210 21757241 chr2R 21757289 21757321 4 80 1.5 0.5 1.0 2.0 111 chr2R 21757210 intergenic Grx-1 + chr2R 21757266 intergenic Grx-1 + chr2R 21757321 intergenic Grx-1 + chr2R_4_21755001 chr2R_21755001 RAL-810 776 chr2R 21809532 21809556 chr2R 21817772 21817796 roo 7 8240 4.0 1.5 2.8 1.8 8264 chr2R 21809532 intergenic not near genes chr2R 21813664 intergenic not near genes chr2R 21817796 intergenic not near genes chr2R_7_21810001 chr2R_21810001 RAL-810 777 chr2R 21841486 21841510 chr2R 21841570 21841595 7 84 1.0 2.5 1.8 2.5 109 chr2R 21841486 intergenic not near genes chr2R 21841540 intergenic not near genes chr2R 21841595 intergenic not near genes chr2R_7_21840001 chr2R_21840001 RAL-810 778 chr2R 21857349 21857372 chr2R 21857440 21857460 6 90 1.5 3.0 2.2 1.9 111 chr2R 21857349 intergenic not near genes chr2R 21857404 intergenic not near genes chr2R 21857460 intergenic not near genes chr2R_6_21855001 chr2R_21855001 RAL-810 779 chr2R 21963207 21963212 chr2R 21963292 21963297 4 85 6.0 2.5 4.2 0.8 90 chr2R 21963207 intergenic not near genes chr2R 21963252 intergenic not near genes chr2R 21963297 intergenic not near genes chr2R_4_21960001 chr2R_21960001 RAL-810 780 chr2R 21985552 21985560 chr2R 21985626 21985641 6 80 3.5 2.0 2.8 1.6 89 chr2R 21985552 intergenic CG30401 - chr2R 21985596 intergenic CG30401 - chr2R 21985641 3` UTR CG30401 - chr2R_6_21985001 chr2R_21985001 RAL-810 781 chr2R 22003088 22003108 chr2R 22003173 22003194 7 86 2.0 0.0 1.0 3.5 106 chr2R 22003088 intron CG34370 - chr2R 22003141 intron CG34370 - chr2R 22003194 intron CG34370 - chr2R_7_22000001 chr2R_22000001 RAL-810 782 chr2R 22009786 22009805 chr2R 22009862 22009881 7 76 0.5 5.0 2.8 1.8 95 chr2R 22009786 intron CG34370 - chr2R 22009834 intron CG34370 - chr2R 22009881 intron CG34370 - chr2R_7_22005001 chr2R_22005001 RAL-810 783 chr2R 22029526 22029531 chr2R 22029604 22029609 6 78 3.5 0.5 2.0 2.0 83 chr2R 22029526 intron CG34370 - chr2R 22029568 intron CG34370 - chr2R 22029609 intron CG34370 - chr2R_6_22025001 chr2R_22025001 RAL-810 784 chr2R 22037783 22037804 chr2R 22037865 22037886 7 82 1.0 1.0 1.0 3.5 103 chr2R 22037783 intron CG34370 - chr2R 22037834 intron CG34370 - chr2R 22037886 intron CG34370 - chr2R_7_22035001 chr2R_22035001 RAL-810 785 chr2R 22072692 22072713 chr2R 22072777 22072798 5 85 3.0 2.5 2.8 1.3 106 chr2R 22072692 intron CG11474 - chr2R 22072745 intron CG11474 - chr2R 22072798 exon CG11474 - chr2R_5_22070001 chr2R_22070001 RAL-810 786 chr2R 22161727 22161743 chr2R 22161865 22161884 8 140 3.0 4.0 3.5 1.8 157 chr2R 22161727 intron a + chr2R 22161806 intron a + chr2R 22161884 intron a + chr2R_8_22160001 chr2R_22160001 RAL-810 787 chr2R 22185681 22185709 chr2R 22185780 22185808 11 99 1.0 0.5 0.8 6.1 127 chr2R 22185681 3` UTR MED16 + chr2R 22185744 3` UTR MED16 + chr2R 22185808 3` UTR MED16 + chr2R_11_22185001 chr2R_22185001 RAL-810 788 chr2R 22189452 22189473 chr2R 22189579 22189600 6 126 2.0 4.5 3.2 1.4 148 chr2R 22189452 3` UTR Vps35 + chr2R 22189526 3` UTR Vps35 + chr2R 22189600 3` UTR Vps35 + chr2R_6_22185001 chr2R_22185001 RAL-810 789 chr2R 22290080 22290104 chr2R 22290164 22290188 6 84 2.0 4.0 3.0 1.5 108 chr2R 22290080 intergenic not near genes chr2R 22290134 intergenic not near genes chr2R 22290188 intergenic not near genes chr2R_6_22290001 chr2R_22290001 RAL-810 790 chr2R 22291154 22291179 chr2R 22291234 22291261 7 78 1.5 5.0 3.2 1.7 107 chr2R 22291154 intergenic not near genes chr2R 22291208 intergenic not near genes chr2R 22291261 intergenic CR43422 + chr2R_7_22290001 chr2R_22290001 RAL-810 791 chr2R 22312782 22312791 chr2R 22312908 22312916 5 125 5.0 2.0 3.5 1.1 134 chr2R 22312782 intergenic CR44758 + chr2R 22312849 intergenic CR44758 + chr2R 22312916 5` UTR CR44758 + chr2R_5_22310001 chr2R_22310001 RAL-810 792 chr2R 22349690 22349709 chr2R 22351474 22351493 jockey 8 1783 4.0 4.5 4.2 1.5 1803 chr2R 22349690 intron Liprin-gamma - chr2R 22350592 intron Liprin-gamma - chr2R 22351493 intron Liprin-gamma - chr2R_8_22350001 chr2R_22350001 RAL-810 793 chr2R 22360386 22360398 chr2R 22360819 22360828 jockey 6 431 5.0 2.0 3.5 1.3 442 chr2R 22360386 intron Liprin-gamma - chr2R 22360607 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-810 794 chr2R 22525751 22525785 chr2R 22529306 22529338 jockey 14 3554 3.5 4.0 3.8 2.9 3587 chr2R 22525751 intron px - chr2R 22527544 intron px - chr2R 22529338 intron px - chr2R_14_22525001 chr2R_22525001 RAL-810 795 chr2R 22549437 22549464 chr2R 22549522 22549538 11 82 5.5 2.0 3.8 2.3 101 chr2R 22549437 intron px - chr2R 22549488 intron px - chr2R 22549538 intron px - chr2R_11_22545001 chr2R_22545001 RAL-810 796 chr2R 22575663 22575694 chr2R 22575742 22575772 7 78 1.0 4.0 2.5 2.0 109 chr2R 22575663 intron dnr1 - chr2R 22575718 intron dnr1 - chr2R 22575772 intron dnr1 - chr2R_7_22575001 chr2R_22575001 RAL-810 797 chr2R 22623465 22623486 chr2R 22623603 22623626 4 139 0.5 2.0 1.2 1.8 161 chr2R 22623465 intron CG33143 + chr2R 22623546 intron CG33143 + chr2R 22623626 intron CG33143 + chr2R_4_22620001 chr2R_22620001 RAL-810 798 chr2R 22774967 22775002 chr2R 22775386 22775421 jockey 11 418 2.5 1.5 2.0 3.7 454 chr2R 22774967 intron CG42260 - chr2R 22775194 intron CG42260 - chr2R 22775421 intron CG42260 - chr2R_11_22775001 chr2R_22775001 RAL-810 799 chr2R 22785728 22785749 chr2R 22785806 22785827 6 78 4.5 2.5 3.5 1.3 99 chr2R 22785728 intron CG42260 - chr2R 22785778 intron CG42260 - chr2R 22785827 intron CG42260 - chr2R_6_22785001 chr2R_22785001 RAL-810 800 chr2R 22843022 22843053 chr2R 22844984 22845015 flea 10 1962 5.0 5.5 5.2 1.6 1993 chr2R 22843022 intergenic CG9826 + chr2R 22844018 intergenic not near genes chr2R 22845015 intergenic not near genes chr2R_10_22840001 chr2R_22840001 RAL-810 801 chr2R 23000140 23000169 chr2R 23000220 23000248 8 77 1.0 3.0 2.0 2.7 108 chr2R 23000140 intron twi + chr2R 23000194 intron twi + chr2R 23000248 intron twi + chr2R_8_23000001 chr2R_23000001 RAL-810 802 chr2R 23061774 23061791 chr2R 23061868 23061885 10 93 1.5 4.0 2.8 2.6 111 chr2R 23061774 3` UTR l(2)06496 - chr2R 23061830 3` UTR l(2)06496 - chr2R 23061885 3` UTR l(2)06496 - chr2R_10_23060001 chr2R_23060001 RAL-810 803 chr2R 23131353 23131371 chr2R 23131454 23131472 5 101 3.0 2.5 2.8 1.3 119 chr2R 23131353 intergenic not near genes chr2R 23131412 intergenic not near genes chr2R 23131472 intergenic not near genes chr2R_5_23130001 chr2R_23130001 RAL-810 804 chr2R 23243266 23243373 chr2R 23243354 23243453 9 86 0.0 0.0 0.0 9.0 187 chr2R 23243266 intergenic not near genes chr2R 23243360 intergenic not near genes chr2R 23243453 intergenic not near genes chr2R_9_23240001 chr2R_23240001 RAL-810 805 chr2R 23394335 23394362 chr2R 23394415 23394444 9 80 2.0 6.0 4.0 1.8 109 chr2R 23394335 intron CG3530 - chr2R 23394390 intron CG3530 - chr2R 23394444 intron CG3530 - chr2R_9_23390001 chr2R_23390001 RAL-810 806 chr2R 23402608 23402634 chr2R 23407684 23407710 flea 11 5076 5.5 3.5 4.5 2.0 5102 chr2R 23402608 intergenic CG3520 - chr2R 23405159 intergenic not near genes chr2R 23407710 intergenic not near genes chr2R_11_23405001 chr2R_23405001 RAL-810 807 chr2R 23421089 23421120 chr2R 23421168 23421199 12 78 1.5 2.5 2.0 4.0 110 chr2R 23421089 intergenic CG9815 - chr2R 23421144 intergenic CG9815 - chr2R 23421199 intergenic CG9815 - chr2R_12_23420001 chr2R_23420001 RAL-810 808 chr2R 23487456 23487471 chr2R 23487537 23487553 6 82 2.0 3.0 2.5 1.7 97 chr2R 23487456 intron CG43795 + chr2R 23487504 intron CG43795 + chr2R 23487553 intron CG43795 + chr2R_6_23485001 chr2R_23485001 RAL-810 809 chr2R 23566554 23566580 chr2R 23566636 23566664 6 80 1.5 2.0 1.8 2.1 110 chr2R 23566554 intron apt + chr2R 23566609 intron apt + chr2R 23566664 intron apt + chr2R_6_23565001 chr2R_23565001 RAL-810 810 chr2R 23594843 23594859 chr2R 23595060 23595075 7 216 2.5 3.5 3.0 1.8 232 chr2R 23594843 intron apt + chr2R 23594959 intron apt + chr2R 23595075 intron apt + chr2R_7_23590001 chr2R_23590001 RAL-810 811 chr2R 23607039 23607193 chr2R 23607120 23607286 13 84 3.0 3.5 3.2 3.1 247 chr2R 23607039 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607286 intron CG17664 - chr2R_13_23605001 chr2R_23605001 RAL-810 812 chr2R 23636719 23636741 chr2R 23636797 23636818 8 77 2.5 3.0 2.8 2.1 99 chr2R 23636719 intron retn + chr2R 23636768 intron retn + chr2R 23636818 intron retn + chr2R_8_23635001 chr2R_23635001 RAL-810 813 chr2R 23674181 23674192 chr2R 23674261 23674272 5 79 4.0 1.5 2.8 1.3 91 chr2R 23674181 intron Pde8 + chr2R 23674226 intron Pde8 + chr2R 23674272 intron Pde8 + chr2R_5_23670001 chr2R_23670001 RAL-810 814 chr2R 23784470 23784506 chr2R 23784548 23784583 15 78 2.0 3.0 2.5 4.3 113 chr2R 23784470 intron CG9850 - chr2R 23784526 intron CG9850 - chr2R 23784583 intron CG9850 - chr2R_15_23780001 chr2R_23780001 RAL-810 815 chr2R 23914298 23914331 chr2R 23921922 23921955 412 7 7624 1.0 1.5 1.2 3.2 7657 chr2R 23914298 exon kcc + chr2R 23918126 intron kcc + chr2R 23921955 intron kcc + chr2R_7_23915001 chr2R_23915001 RAL-810 816 chr2R 23926832 23926864 chr2R 23926914 23926946 10 82 0.5 2.5 1.5 4.0 114 chr2R 23926832 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926889 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926946 3` UTR Ca-P60A - chr2R_10_23925001 chr2R_23925001 RAL-810 817 chr2R 24031383 24031401 chr2R 24031465 24031485 10 84 8.0 2.0 5.0 1.7 102 chr2R 24031383 5` UTR CG30172 - chr2R 24031434 intergenic CG30172 -,Chi - chr2R 24031485 intergenic Chi -,CG30172 - chr2R_10_24030001 chr2R_24030001 RAL-810 818 chr2R 24177234 24177268 chr2R 24184719 24184753 412 11 7485 4.0 1.5 2.8 2.9 7519 chr2R 24177234 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184753 3` UTR Nop60B + chr2R_11_24180001 chr2R_24180001 RAL-810 819 chr2R 24226880 24226897 chr2R 24226938 24226971 9 73 3.0 1.5 2.2 2.8 91 chr2R 24226880 intron CG30419 - chr2R 24226926 intron CG30419 - chr2R 24226971 intron CG30419 - chr2R_9_24225001 chr2R_24225001 RAL-810 820 chr2R 24228397 24228420 chr2R 24228478 24228497 4 78 2.0 1.5 1.8 1.4 100 chr2R 24228397 intron CG30419 - chr2R 24228447 intron CG30419 - chr2R 24228497 intron CG30419 - chr2R_4_24225001 chr2R_24225001 RAL-810 821 chr2R 24303889 24303918 chr2R 24303973 24304000 7 81 3.0 0.0 1.5 2.8 111 chr2R 24303889 intergenic not near genes chr2R 24303944 intergenic not near genes chr2R 24304000 intergenic not near genes chr2R_7_24300001 chr2R_24300001 RAL-810 822 chr2R 24313381 24313401 chr2R 24313464 24313484 9 83 3.5 3.0 3.2 2.1 103 chr2R 24313381 intergenic betaTub60D + chr2R 24313432 intergenic betaTub60D + chr2R 24313484 intergenic betaTub60D + chr2R_9_24310001 chr2R_24310001 RAL-810 823 chr2R 24351414 24351439 chr2R 24351495 24351519 12 81 1.5 4.0 2.8 3.2 105 chr2R 24351414 intron bs + chr2R 24351466 intron bs + chr2R 24351519 intron,3` UTR bs +,CR44811 - chr2R_12_24350001 chr2R_24350001 RAL-810 824 chr2R 24353427 24353462 chr2R 24361789 24361802 roo 7 8359 0.0 1.5 0.8 3.9 8375 chr2R 24353427 intron,intron bs +,CR44811 - chr2R 24357614 intron,intron bs +,CR44811 - chr2R 24361802 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 RAL-810 825 chr2R 24366248 24366274 chr2R 24366335 24366361 11 87 2.0 2.0 2.0 3.7 113 chr2R 24366248 intron,intron bs +,CR44811 - chr2R 24366304 intron,intron bs +,CR44811 - chr2R 24366361 intron,intron bs +,CR44811 - chr2R_11_24365001 chr2R_24365001 RAL-810 826 chr2R 24383826 24383835 chr2R 24383907 24383916 4 80 6.0 0.5 3.2 1.0 90 chr2R 24383826 intron mAChR-A - chr2R 24383871 intron mAChR-A - chr2R 24383916 intron mAChR-A - chr2R_4_24380001 chr2R_24380001 RAL-810 827 chr2R 24430717 24430949 chr2R 24430851 24431037 8 99 0.0 0.0 0.0 8.0 320 chr2R 24430717 intergenic CG15873 - chr2R 24430877 intergenic CG15873 -,Pgam5-2 - chr2R 24431037 intergenic Pgam5-2 -,CG15873 - chr2R_8_24430001 chr2R_24430001 RAL-810 828 chr2R 24470370 24470393 chr2R 24470465 24470488 5 95 1.0 4.0 2.5 1.4 118 chr2R 24470370 intron CG13579 + chr2R 24470429 intron CG13579 + chr2R 24470488 intron CG13579 + chr2R_5_24470001 chr2R_24470001 RAL-810 829 chr2R 24490881 24490916 chr2R 24492629 24492662 5 1746 15.5 17.5 16.5 0.3 1781 chr2R 24490881 intergenic CG13579 + chr2R 24491772 intergenic CG13589 - chr2R 24492662 exon CG13589 - chr2R_5_24490001 chr2R_24490001 RAL-810 830 chr2R 24518028 24518043 chr2R 24518112 24518128 4 85 3.0 2.0 2.5 1.1 100 chr2R 24518028 intergenic not near genes chr2R 24518078 intergenic not near genes chr2R 24518128 intergenic not near genes chr2R_4_24515001 chr2R_24515001 RAL-810 831 chr2R 24542964 24542988 chr2R 24543043 24543066 9 79 3.0 1.5 2.2 2.8 102 chr2R 24542964 intron,intron CG4622 -,ITP + chr2R 24543015 intron,intron CG4622 -,ITP + chr2R 24543066 intron,intron CG4622 -,ITP + chr2R_9_24540001 chr2R_24540001 RAL-810 832 chr2R 24590113 24590136 chr2R 24590204 24590228 6 88 0.5 1.0 0.8 3.3 115 chr2R 24590113 intron pio + chr2R 24590170 intron pio + chr2R 24590228 intron pio + chr2R_6_24590001 chr2R_24590001 RAL-810 833 chr2R 24647588 24647617 chr2R 24655145 24655174 412 6 7556 4.5 1.5 3.0 1.5 7586 chr2R 24647588 intergenic not near genes chr2R 24651381 intergenic not near genes chr2R 24655174 intergenic not near genes chr2R_6_24650001 chr2R_24650001 RAL-810 834 chr2R 24727884 24727918 chr2R 24735392 24735411 mdg1 8 7506 0.5 1.5 1.0 4.0 7527 chr2R 24727884 intron Mid1 - chr2R 24731648 intron Mid1 - chr2R 24735411 intron Mid1 - chr2R_8_24730001 chr2R_24730001 RAL-810 835 chr2R 24802178 24802191 chr2R 24802257 24802268 4 77 2.0 2.0 2.0 1.3 90 chr2R 24802178 intergenic not near genes chr2R 24802223 intergenic not near genes chr2R 24802268 intergenic not near genes chr2R_4_24800001 chr2R_24800001 RAL-810 836 chr2R 24884053 24884077 chr2R 24884135 24884159 8 81 3.5 0.5 2.0 2.7 106 chr2R 24884053 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884159 intron NKAIN + chr2R_8_24880001 chr2R_24880001 RAL-810 837 chr2R 25014544 25014573 chr2R 25014619 25014649 5 75 0.5 1.5 1.0 2.5 105 chr2R 25014544 intron uzip + chr2R 25014596 intron uzip + chr2R 25014649 intron uzip + chr2R_5_25010001 chr2R_25010001 RAL-810 838 chr2R 25101294 25101305 chr2R 25101393 25101406 6 101 4.0 2.0 3.0 1.5 112 chr2R 25101294 intron lov - chr2R 25101350 intron lov - chr2R 25101406 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-810 839 chr2R 25141649 25141676 chr2R 25159338 25159366 roo 6 17689 3.0 4.5 3.8 1.2 17717 chr2R 25141649 intergenic not near genes chr2R 25150508 intergenic not near genes chr2R 25159366 intergenic not near genes chr2R_6_25150001 chr2R_25150001 RAL-810 840 chr2R 25180765 25180793 chr2R 25180842 25180870 10 77 4.5 3.5 4.0 2.0 105 chr2R 25180765 intergenic not near genes chr2R 25180818 intergenic not near genes chr2R 25180870 intergenic not near genes chr2R_10_25180001 chr2R_25180001 RAL-810 841 chr2R 25207809 25207817 chr2R 25208251 25208259 5 442 14.0 17.5 15.8 0.3 450 chr2R 25207809 5` UTR CG9380 - chr2R 25208034 intron CG9380 - chr2R 25208259 intron CG9380 - chr2R_5_25205001 chr2R_25205001 RAL-810 842 chr3L 30829 30857 chr3L 30986 31018 12 160 3.0 2.0 2.5 3.4 189 chr3L 30829 intergenic not near genes chr3L 30924 intergenic not near genes chr3L 31018 intergenic not near genes chr3L_12_30001 chr3L_30001 RAL-810 843 chr3L 68983 69014 chr3L 69070 69101 10 87 2.5 3.5 3.0 2.5 118 chr3L 68983 3` UTR Lsp1gamma + chr3L 69042 intergenic Lsp1gamma +,CR44510 + chr3L 69101 intergenic CR44510 +,Lsp1gamma + chr3L_10_65001 chr3L_65001 RAL-810 844 chr3L 106001 106028 chr3L 106130 106157 9 129 3.5 4.0 3.8 1.9 156 chr3L 106001 intergenic not near genes chr3L 106079 intergenic not near genes chr3L 106157 intergenic not near genes chr3L_9_105001 chr3L_105001 RAL-810 845 chr3L 108610 108623 chr3L 108753 108766 8 143 2.5 3.5 3.0 2.0 156 chr3L 108610 intergenic not near genes chr3L 108688 intergenic not near genes chr3L 108766 intergenic not near genes chr3L_8_105001 chr3L_105001 RAL-810 846 chr3L 110213 110243 chr3L 119380 119410 roo 6 9167 3.0 4.0 3.5 1.3 9197 chr3L 110213 intergenic not near genes chr3L 114812 intergenic not near genes chr3L 119410 intergenic not near genes chr3L_6_110001 chr3L_110001 RAL-810 847 chr3L 346731 346745 chr3L 346862 346876 8 131 6.0 1.5 3.8 1.7 145 chr3L 346731 intron,intron Ptpmeg +,mth - chr3L 346804 intron,intron Ptpmeg +,mth - chr3L 346876 intron,5` UTR Ptpmeg +,mth - chr3L_8_345001 chr3L_345001 RAL-810 848 chr3L 402691 402714 chr3L 409744 409761 297 6 7052 4.0 5.0 4.5 1.1 7070 chr3L 402691 intergenic not near genes chr3L 406226 intergenic not near genes chr3L 409761 intergenic not near genes chr3L_6_405001 chr3L_405001 RAL-810 849 chr3L 416153 416166 chr3L 416241 416254 6 88 1.0 4.0 2.5 1.7 101 chr3L 416153 intergenic not near genes chr3L 416204 intergenic not near genes chr3L 416254 intergenic not near genes chr3L_6_415001 chr3L_415001 RAL-810 850 chr3L 456216 456239 chr3L 456295 456318 6 79 2.0 3.0 2.5 1.7 102 chr3L 456216 intron klar - chr3L 456267 intron klar - chr3L 456318 intron klar - chr3L_6_455001 chr3L_455001 RAL-810 851 chr3L 459978 460008 chr3L 460055 460085 10 77 1.0 2.0 1.5 4.0 107 chr3L 459978 intron klar - chr3L 460032 intron klar - chr3L 460085 intron klar - chr3L_10_460001 chr3L_460001 RAL-810 852 chr3L 514284 514306 chr3L 514361 514383 10 77 1.0 6.0 3.5 2.2 99 chr3L 514284 intron klar - chr3L 514334 intron klar - chr3L 514383 intron klar - chr3L_10_510001 chr3L_510001 RAL-810 853 chr3L 563972 563999 chr3L 564151 564178 9 179 2.5 3.5 3.0 2.2 206 chr3L 563972 intron hipk + chr3L 564075 intron hipk + chr3L 564178 intron hipk + chr3L_9_560001 chr3L_560001 RAL-810 854 chr3L 642468 642491 chr3L 642559 642582 14 91 5.5 3.0 4.2 2.7 114 chr3L 642468 5` UTR CR43334 + chr3L 642525 5` UTR CR43334 + chr3L 642582 5` UTR CR43334 + chr3L_14_640001 chr3L_640001 RAL-810 855 chr3L 651389 651423 chr3L 651477 651511 16 87 3.5 1.5 2.5 4.6 122 chr3L 651389 intergenic Gale +,CG3402 - chr3L 651450 intergenic CG3402 -,Gale + chr3L 651511 intergenic CG3402 -,Gale + chr3L_16_650001 chr3L_650001 RAL-810 856 chr3L 671728 671746 chr3L 671819 671837 8 91 1.5 1.5 1.5 3.2 109 chr3L 671728 intergenic not near genes chr3L 671782 intergenic not near genes chr3L 671837 intergenic not near genes chr3L_8_670001 chr3L_670001 RAL-810 857 chr3L 705903 705930 chr3L 705999 706026 9 96 3.5 4.0 3.8 1.9 123 chr3L 705903 intergenic CG13895 -,CR44514 + chr3L 705964 3` UTR CG13895 - chr3L 706026 3` UTR CG13895 - chr3L_9_705001 chr3L_705001 RAL-810 858 chr3L 712469 712499 chr3L 712715 712745 9 244 1.5 1.5 1.5 3.6 276 chr3L 712469 intergenic not near genes chr3L 712607 intergenic not near genes chr3L 712745 intergenic not near genes chr3L_9_710001 chr3L_710001 RAL-810 859 chr3L 713064 713094 chr3L 713154 713182 12 89 2.5 3.5 3.0 3.0 118 chr3L 713064 intergenic not near genes chr3L 713123 intergenic not near genes chr3L 713182 intergenic not near genes chr3L_12_710001 chr3L_710001 RAL-810 860 chr3L 826001 826034 chr3L 826099 826132 7 97 4.5 0.0 2.2 2.2 131 chr3L 826001 intergenic not near genes chr3L 826066 intergenic not near genes chr3L 826132 intergenic not near genes chr3L_7_825001 chr3L_825001 RAL-810 861 chr3L 857999 858019 chr3L 866480 866499 Tirant 6 8477 1.5 0.5 1.0 3.0 8500 chr3L 857999 intergenic not near genes chr3L 862249 intergenic not near genes chr3L 866499 5` UTR CG12502 + chr3L_6_860001 chr3L_860001 RAL-810 862 chr3L 899998 900011 chr3L 900082 900095 5 84 0.0 4.5 2.2 1.6 97 chr3L 899998 intergenic not near genes chr3L 900046 intergenic not near genes chr3L 900095 intergenic not near genes chr3L_5_900001 chr3L_900001 RAL-810 863 chr3L 925183 925210 chr3L 932609 932636 mdg1 10 7426 2.0 3.0 2.5 2.9 7453 chr3L 925183 intron Glut1 + chr3L 928910 intron Glut1 + chr3L 932636 intron Glut1 + chr3L_10_925001 chr3L_925001 RAL-810 864 chr3L 939776 939801 chr3L 940889 940922 jockey 10 1120 3.5 4.5 4.0 2.0 1146 chr3L 939776 intron Glut1 + chr3L 940349 intron Glut1 + chr3L 940922 intron Glut1 + chr3L_10_940001 chr3L_940001 RAL-810 865 chr3L 961023 961043 chr3L 961116 961136 9 93 2.5 5.0 3.8 1.9 113 chr3L 961023 intron Glut1 + chr3L 961080 intron Glut1 + chr3L 961136 intron Glut1 + chr3L_9_960001 chr3L_960001 RAL-810 866 chr3L 1021373 1021404 chr3L 1021453 1021471 11 78 2.5 2.0 2.2 3.4 98 chr3L 1021373 intron trio - chr3L 1021422 intron trio - chr3L 1021471 intron trio - chr3L_11_1020001 chr3L_1020001 RAL-810 867 chr3L 1031581 1031612 chr3L 1031657 1031684 5 72 0.0 4.5 2.2 1.6 103 chr3L 1031581 intron trio - chr3L 1031632 intron trio - chr3L 1031684 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-810 868 chr3L 1033329 1033340 chr3L 1033435 1033447 8 107 0.0 0.0 0.0 8.0 118 chr3L 1033329 intron trio - chr3L 1033388 intron trio - chr3L 1033447 intron trio - chr3L_8_1030001 chr3L_1030001 RAL-810 869 chr3L 1040904 1040913 chr3L 1040967 1040986 4 69 3.5 2.0 2.8 1.1 82 chr3L 1040904 intron bab1 - chr3L 1040945 intron bab1 - chr3L 1040986 intron bab1 - chr3L_4_1040001 chr3L_1040001 RAL-810 870 chr3L 1047365 1047385 chr3L 1055163 1055193 412 4 7808 2.0 2.5 2.2 1.2 7828 chr3L 1047365 intron bab1 - chr3L 1051279 intron bab1 - chr3L 1055193 intron bab1 - chr3L_4_1050001 chr3L_1050001 RAL-810 871 chr3L 1055800 1055825 chr3L 1056199 1056221 6 398 2.0 1.5 1.8 2.1 421 chr3L 1055800 intron bab1 - chr3L 1056010 intron bab1 - chr3L 1056221 intron bab1 - chr3L_6_1055001 chr3L_1055001 RAL-810 872 chr3L 1109633 1109666 chr3L 1109721 1109751 7 88 2.5 2.5 2.5 2.0 118 chr3L 1109633 intergenic not near genes chr3L 1109692 intergenic not near genes chr3L 1109751 intergenic not near genes chr3L_7_1105001 chr3L_1105001 RAL-810 873 chr3L 1145241 1145267 chr3L 1145319 1145345 8 79 1.0 0.0 0.5 5.3 104 chr3L 1145241 intron bab2 - chr3L 1145293 intron bab2 - chr3L 1145345 intron bab2 - chr3L_8_1145001 chr3L_1145001 RAL-810 874 chr3L 1154129 1154163 chr3L 1163279 1163313 roo 10 9150 1.0 2.5 1.8 3.6 9184 chr3L 1154129 intron bab2 - chr3L 1158721 intron bab2 - chr3L 1163313 intron bab2 - chr3L_10_1155001 chr3L_1155001 RAL-810 875 chr3L 1219596 1219623 chr3L 1227329 1227356 412 10 7731 2.5 4.0 3.2 2.4 7760 chr3L 1219596 intron mwh + chr3L 1223476 intron mwh + chr3L 1227356 intron mwh + chr3L_10_1220001 chr3L_1220001 RAL-810 876 chr3L 1396756 1396758 chr3L 1396835 1396838 4 80 8.0 9.5 8.8 0.4 82 chr3L 1396756 intron Ptp61F - chr3L 1396797 intron Ptp61F - chr3L 1396838 intron Ptp61F - chr3L_4_1395001 chr3L_1395001 RAL-810 877 chr3L 1415781 1415806 chr3L 1415860 1415879 6 80 1.0 1.5 1.2 2.7 98 chr3L 1415781 intron Ptp61F - chr3L 1415830 intron Ptp61F - chr3L 1415879 intron Ptp61F - chr3L_6_1415001 chr3L_1415001 RAL-810 878 chr3L 1502007 1502021 chr3L 1502085 1502102 5 80 3.0 1.5 2.2 1.6 95 chr3L 1502007 intron pUf68 - chr3L 1502054 intron pUf68 - chr3L 1502102 intron pUf68 - chr3L_5_1500001 chr3L_1500001 RAL-810 879 chr3L 1505996 1506020 chr3L 1513593 1513617 17.6 10 7597 6.0 4.0 5.0 1.7 7621 chr3L 1505996 intron,intron Psa +,cue - chr3L 1509806 intron,intron Psa +,cue - chr3L 1513617 intron,intron Psa +,cue - chr3L_10_1505001 chr3L_1505001 RAL-810 880 chr3L 1639224 1639242 chr3L 1639404 1639422 10 180 2.0 3.5 2.8 2.6 198 chr3L 1639224 5` UTR metl - chr3L 1639323 intergenic metl -,Bgb + chr3L 1639422 intergenic metl -,Bgb + chr3L_10_1635001 chr3L_1635001 RAL-810 881 chr3L 1728523 1728553 chr3L 1728608 1728637 10 85 2.0 1.0 1.5 4.0 114 chr3L 1728523 intron drpr - chr3L 1728580 intron drpr - chr3L 1728637 intron drpr - chr3L_10_1725001 chr3L_1725001 RAL-810 882 chr3L 1740854 1740883 chr3L 1741097 1741126 pogo 7 243 5.0 5.0 5.0 1.2 272 chr3L 1740854 intron Gk + chr3L 1740990 intron Gk + chr3L 1741126 intron Gk + chr3L_7_1740001 chr3L_1740001 RAL-810 883 chr3L 1754690 1754722 chr3L 1754809 1754838 13 118 1.0 2.5 1.8 4.6 148 chr3L 1754690 intron Cht2 - chr3L 1754764 intron Cht2 - chr3L 1754838 intron Cht2 - chr3L_13_1750001 chr3L_1750001 RAL-810 884 chr3L 1924962 1924975 chr3L 1925100 1925113 5 138 2.0 1.0 1.5 2.0 151 chr3L 1924962 exon Dbx + chr3L 1925038 intron Dbx + chr3L 1925113 intron Dbx + chr3L_5_1925001 chr3L_1925001 RAL-810 885 chr3L 2108248 2108282 chr3L 2113452 2113486 copia 7 5203 3.0 4.0 3.5 1.6 5238 chr3L 2108248 intron sls - chr3L 2110867 intron sls - chr3L 2113486 intron sls - chr3L_7_2110001 chr3L_2110001 RAL-810 886 chr3L 2139205 2139223 chr3L 2139286 2139303 5 81 3.5 2.0 2.8 1.3 98 chr3L 2139205 intron zormin - chr3L 2139254 intron zormin - chr3L 2139303 intron zormin - chr3L_5_2135001 chr3L_2135001 RAL-810 887 chr3L 2168774 2168806 chr3L 2168865 2168897 8 91 2.0 2.0 2.0 2.7 123 chr3L 2168774 exon CG15879 - chr3L 2168836 intron CG15879 - chr3L 2168897 intron CG15879 - chr3L_8_2165001 chr3L_2165001 RAL-810 888 chr3L 2308007 2308023 chr3L 2308113 2308127 4 104 3.5 0.5 2.0 1.3 120 chr3L 2308007 intergenic not near genes chr3L 2308067 intergenic not near genes chr3L 2308127 intergenic not near genes chr3L_4_2305001 chr3L_2305001 RAL-810 889 chr3L 2414470 2414491 chr3L 2414624 2414645 5 154 3.5 3.5 3.5 1.1 175 chr3L 2414470 intron CG45186 + chr3L 2414558 intron CG45186 + chr3L 2414645 intron CG45186 + chr3L_5_2410001 chr3L_2410001 RAL-810 890 chr3L 2447503 2447536 chr3L 2456659 2456692 roo 9 9156 1.0 1.5 1.2 4.1 9189 chr3L 2447503 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456692 intron CG45186 + chr3L_9_2450001 chr3L_2450001 RAL-810 891 chr3L 2467449 2467457 chr3L 2467546 2467552 4 96 2.0 0.0 1.0 2.0 103 chr3L 2467449 intron CG45186 + chr3L 2467500 intron CG45186 + chr3L 2467552 intron CG45186 + chr3L_4_2465001 chr3L_2465001 RAL-810 892 chr3L 2533655 2533682 chr3L 2533735 2533764 4 81 2.5 2.5 2.5 1.1 109 chr3L 2533655 intron Spn - chr3L 2533710 intron Spn - chr3L 2533764 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-810 893 chr3L 2554054 2554089 chr3L 2554132 2554166 13 78 2.0 0.0 1.0 6.5 112 chr3L 2554054 intron Spn - chr3L 2554110 5` UTR Spn - chr3L 2554166 5` UTR Spn - chr3L_13_2550001 chr3L_2550001 RAL-810 894 chr3L 2561527 2561553 chr3L 2561603 2561630 11 77 3.5 3.5 3.5 2.4 103 chr3L 2561527 intron msn - chr3L 2561578 intron msn - chr3L 2561630 intron msn - chr3L_11_2560001 chr3L_2560001 RAL-810 895 chr3L 2581899 2581912 chr3L 2581993 2582006 7 94 5.0 1.0 3.0 1.8 107 chr3L 2581899 intron msn - chr3L 2581952 intron msn - chr3L 2582006 intron msn - chr3L_7_2580001 chr3L_2580001 RAL-810 896 chr3L 2682989 2683021 chr3L 2683066 2683099 8 78 2.0 3.0 2.5 2.3 110 chr3L 2682989 intron Fife - chr3L 2683044 intron Fife - chr3L 2683099 intron Fife - chr3L_8_2680001 chr3L_2680001 RAL-810 897 chr3L 2683944 2683976 chr3L 2684020 2684052 13 76 1.5 1.5 1.5 5.2 108 chr3L 2683944 intron Fife - chr3L 2683998 intron Fife - chr3L 2684052 intron Fife - chr3L_13_2680001 chr3L_2680001 RAL-810 898 chr3L 2685737 2685764 chr3L 2685857 2685883 12 119 4.0 2.5 3.2 2.9 146 chr3L 2685737 intron Fife - chr3L 2685810 intron Fife - chr3L 2685883 intron Fife - chr3L_12_2685001 chr3L_2685001 RAL-810 899 chr3L 2719544 2719560 chr3L 2719646 2719662 6 102 4.0 0.5 2.2 1.9 118 chr3L 2719544 3` UTR Mrtf - chr3L 2719603 3` UTR Mrtf - chr3L 2719662 3` UTR Mrtf - chr3L_6_2715001 chr3L_2715001 RAL-810 900 chr3L 2766732 2766766 chr3L 2766829 2766863 9 97 4.0 2.5 3.2 2.1 131 chr3L 2766732 intergenic Mrtf -,Non2 + chr3L 2766798 intergenic Non2 +,Mrtf - chr3L 2766863 intergenic Non2 +,Mrtf - chr3L_9_2765001 chr3L_2765001 RAL-810 901 chr3L 2877767 2877777 chr3L 2877916 2877926 5 149 2.5 7.5 5.0 0.8 159 chr3L 2877767 intron CG43444 - chr3L 2877846 intron CG43444 - chr3L 2877926 intron CG43444 - chr3L_5_2875001 chr3L_2875001 RAL-810 902 chr3L 2927843 2927856 chr3L 2936120 2936133 Tirant 5 8277 4.5 3.0 3.8 1.0 8290 chr3L 2927843 intron Shab + chr3L 2931988 intron Shab + chr3L 2936133 intron Shab + chr3L_5_2930001 chr3L_2930001 RAL-810 903 chr3L 3040334 3040349 chr3L 3042123 3042138 S-element 6 1789 5.5 0.5 3.0 1.5 1804 chr3L 3040334 3` UTR CG2162 + chr3L 3041236 intergenic not near genes chr3L 3042138 intergenic Jafrac2 + chr3L_6_3040001 chr3L_3040001 RAL-810 904 chr3L 3051743 3051756 chr3L 3051985 3051998 pogo 6 242 11.5 0.0 5.8 0.9 255 chr3L 3051743 3` UTR CG32485 + chr3L 3051870 intergenic CG32485 + chr3L 3051998 intergenic CG32485 + chr3L_6_3050001 chr3L_3050001 RAL-810 905 chr3L 3254094 3254117 chr3L 3254185 3254208 8 91 0.5 4.5 2.5 2.3 114 chr3L 3254094 5` UTR CR43626 + chr3L 3254151 5` UTR CR43626 + chr3L 3254208 5` UTR CR43626 + chr3L_8_3250001 chr3L_3250001 RAL-810 906 chr3L 3269123 3269128 chr3L 3269214 3269219 4 91 0.0 6.0 3.0 1.0 96 chr3L 3269123 intergenic CG34265 + chr3L 3269171 intergenic CG34265 + chr3L 3269219 intergenic CG34265 + chr3L_4_3265001 chr3L_3265001 RAL-810 907 chr3L 3281443 3281472 chr3L 3281939 3281968 Doc 7 496 0.5 4.0 2.2 2.2 525 chr3L 3281443 intron CG12017 + chr3L 3281706 intron CG12017 + chr3L 3281968 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-810 908 chr3L 3315981 3316010 chr3L 3316082 3316111 4 101 1.0 0.0 0.5 2.7 130 chr3L 3315981 intergenic Drsl4 + chr3L 3316046 intergenic Drsl4 + chr3L 3316111 intergenic Drsl4 + chr3L_4_3315001 chr3L_3315001 RAL-810 909 chr3L 3470158 3470189 chr3L 3470234 3470265 7 76 2.5 2.0 2.2 2.2 107 chr3L 3470158 intron CG14971 - chr3L 3470212 intron CG14971 - chr3L 3470265 intron CG14971 - chr3L_7_3470001 chr3L_3470001 RAL-810 910 chr3L 3475077 3475110 chr3L 3475521 3475553 jockey 8 443 2.0 2.0 2.0 2.7 476 chr3L 3475077 intron CG42324 + chr3L 3475315 intron CG42324 + chr3L 3475553 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-810 911 chr3L 3484427 3484447 chr3L 3484504 3484524 7 77 1.5 5.0 3.2 1.7 97 chr3L 3484427 intron,intron CG42324 +,CG43074 - chr3L 3484476 intron,exon CG42324 +,CG43074 - chr3L 3484524 intron,intron CG42324 +,CG43074 - chr3L_7_3480001 chr3L_3480001 RAL-810 912 chr3L 3494754 3494780 chr3L 3494832 3494856 4 75 2.5 2.5 2.5 1.1 102 chr3L 3494754 intron CG42324 + chr3L 3494805 intron CG42324 + chr3L 3494856 intron CG42324 + chr3L_4_3490001 chr3L_3490001 RAL-810 913 chr3L 3512965 3512975 chr3L 3513045 3513055 4 80 1.0 5.5 3.2 1.0 90 chr3L 3512965 intergenic ImpE2 - chr3L 3513010 intergenic ImpE2 - chr3L 3513055 intergenic ImpE2 - chr3L_4_3510001 chr3L_3510001 RAL-810 914 chr3L 3551443 3551470 chr3L 3551532 3551559 6 89 1.5 2.0 1.8 2.1 116 chr3L 3551443 intron Eip63E + chr3L 3551501 intron Eip63E + chr3L 3551559 intron Eip63E + chr3L_6_3550001 chr3L_3550001 RAL-810 915 chr3L 3574805 3574837 chr3L 3575064 3575096 10 259 3.5 4.0 3.8 2.1 291 chr3L 3574805 intron Eip63E + chr3L 3574950 intron Eip63E + chr3L 3575096 intron Eip63E + chr3L_10_3570001 chr3L_3570001 RAL-810 916 chr3L 3577735 3577767 chr3L 3577813 3577844 5 78 0.0 1.0 0.5 3.3 109 chr3L 3577735 intron Eip63E + chr3L 3577790 intron Eip63E + chr3L 3577844 intron Eip63E + chr3L_5_3575001 chr3L_3575001 RAL-810 917 chr3L 3601297 3601312 chr3L 3606608 3606623 copia 7 5311 4.5 1.0 2.8 1.8 5326 chr3L 3601297 intron Eip63E + chr3L 3603960 intron Eip63E + chr3L 3606623 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-810 918 chr3L 3783272 3783286 chr3L 3783348 3783363 6 77 5.0 0.5 2.8 1.6 91 chr3L 3783272 intron CG32264 - chr3L 3783318 intron CG32264 - chr3L 3783363 intron CG32264 - chr3L_6_3780001 chr3L_3780001 RAL-810 919 chr3L 3797238 3797256 chr3L 3797321 3797339 4 83 3.5 1.5 2.5 1.1 101 chr3L 3797238 intron CG32264 - chr3L 3797288 intron CG32264 - chr3L 3797339 intron CG32264 - chr3L_4_3795001 chr3L_3795001 RAL-810 920 chr3L 3815053 3815079 chr3L 3815134 3815158 13 81 3.5 5.5 4.5 2.4 105 chr3L 3815053 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815106 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815158 intron,intron Scsalpha +,CR43932 - chr3L_13_3815001 chr3L_3815001 RAL-810 921 chr3L 3833737 3833761 chr3L 3833978 3834002 pogo 7 241 3.5 3.0 3.2 1.7 265 chr3L 3833737 intron enc + chr3L 3833870 intron enc + chr3L 3834002 intron enc + chr3L_7_3830001 chr3L_3830001 RAL-810 922 chr3L 3890971 3890986 chr3L 3891052 3891066 8 81 3.0 0.0 1.5 3.2 95 chr3L 3890971 intergenic not near genes chr3L 3891018 intergenic not near genes chr3L 3891066 intergenic not near genes chr3L_8_3890001 chr3L_3890001 RAL-810 923 chr3L 3921399 3921417 chr3L 3921663 3921678 11 264 2.0 5.0 3.5 2.4 279 chr3L 3921399 intron Eip63F-1 - chr3L 3921538 intron Eip63F-1 - chr3L 3921678 intron Eip63F-1 - chr3L_11_3920001 chr3L_3920001 RAL-810 924 chr3L 3935827 3935845 chr3L 3935905 3935923 8 78 3.0 4.0 3.5 1.8 96 chr3L 3935827 5` UTR Eip63F-2 + chr3L 3935875 5` UTR Eip63F-2 + chr3L 3935923 5` UTR Eip63F-2 + chr3L_8_3935001 chr3L_3935001 RAL-810 925 chr3L 3964196 3964200 chr3L 3964272 3964276 4 76 6.0 4.0 5.0 0.7 80 chr3L 3964196 intron CG12605 - chr3L 3964236 intron CG12605 - chr3L 3964276 intron CG12605 - chr3L_4_3960001 chr3L_3960001 RAL-810 926 chr3L 4146818 4146841 chr3L 4146895 4146917 11 76 0.0 4.0 2.0 3.7 99 chr3L 4146818 intergenic not near genes chr3L 4146868 intergenic not near genes chr3L 4146917 intergenic not near genes chr3L_11_4145001 chr3L_4145001 RAL-810 927 chr3L 4168213 4168226 chr3L 4168292 4168305 6 79 0.0 3.5 1.8 2.1 92 chr3L 4168213 intergenic CR44529 - chr3L 4168259 3` UTR CR44529 - chr3L 4168305 3` UTR CR44529 - chr3L_6_4165001 chr3L_4165001 RAL-810 928 chr3L 4246094 4246118 chr3L 4246173 4246197 5 78 4.0 5.0 4.5 0.9 103 chr3L 4246094 3` UTR pav + chr3L 4246146 3` UTR pav + chr3L 4246197 3` UTR pav + chr3L_5_4245001 chr3L_4245001 RAL-810 929 chr3L 4328737 4328759 chr3L 4336235 4336257 412 7 7498 2.5 3.0 2.8 1.8 7520 chr3L 4328737 intron Cip4 - chr3L 4332497 intron Cip4 - chr3L 4336257 intron Cip4 - chr3L_7_4330001 chr3L_4330001 RAL-810 930 chr3L 4382311 4382336 chr3L 4382413 4382438 8 102 4.0 3.5 3.8 1.7 127 chr3L 4382311 intergenic not near genes chr3L 4382374 intergenic not near genes chr3L 4382438 intergenic not near genes chr3L_8_4380001 chr3L_4380001 RAL-810 931 chr3L 4477293 4477299 chr3L 4477397 4477403 5 104 5.5 0.0 2.8 1.3 110 chr3L 4477293 intergenic not near genes chr3L 4477348 intergenic not near genes chr3L 4477403 intergenic not near genes chr3L_5_4475001 chr3L_4475001 RAL-810 932 chr3L 4484724 4484751 chr3L 4484802 4484829 7 78 1.0 4.5 2.8 1.8 105 chr3L 4484724 intergenic CG11350 +,CG13722 - chr3L 4484776 intergenic CG13722 -,CG11350 + chr3L 4484829 intergenic CG13722 -,CG11350 + chr3L_7_4480001 chr3L_4480001 RAL-810 933 chr3L 4652574 4652600 chr3L 4652655 4652682 6 82 1.5 2.0 1.8 2.1 108 chr3L 4652574 intron axo - chr3L 4652628 intron axo - chr3L 4652682 intron axo - chr3L_6_4650001 chr3L_4650001 RAL-810 934 chr3L 4676036 4676048 chr3L 4676117 4676129 4 81 2.5 0.0 1.2 1.8 93 chr3L 4676036 intron axo - chr3L 4676082 intron axo - chr3L 4676129 intron axo - chr3L_4_4675001 chr3L_4675001 RAL-810 935 chr3L 4744405 4744432 chr3L 4744485 4744512 6 80 3.0 0.5 1.8 2.1 107 chr3L 4744405 intron RhoGEF64C + chr3L 4744458 intron RhoGEF64C + chr3L 4744512 intron RhoGEF64C + chr3L_6_4740001 chr3L_4740001 RAL-810 936 chr3L 4837892 4837922 chr3L 4837971 4838001 7 79 2.0 5.0 3.5 1.6 109 chr3L 4837892 3` UTR CG13707 - chr3L 4837946 3` UTR CG13707 - chr3L 4838001 3` UTR CG13707 - chr3L_7_4835001 chr3L_4835001 RAL-810 937 chr3L 4840409 4840421 chr3L 4840518 4840530 5 109 0.5 3.5 2.0 1.7 121 chr3L 4840409 intergenic CG13707 - chr3L 4840470 intergenic CG13707 - chr3L 4840530 intergenic CG13707 - chr3L_5_4840001 chr3L_4840001 RAL-810 938 chr3L 4855677 4855679 chr3L 4855753 4855755 4 76 2.5 3.0 2.8 1.1 78 chr3L 4855677 intergenic not near genes chr3L 4855716 intergenic not near genes chr3L 4855755 intergenic not near genes chr3L_4_4855001 chr3L_4855001 RAL-810 939 chr3L 4858309 4858322 chr3L 4858391 4858412 4 88 4.0 1.5 2.8 1.1 103 chr3L 4858309 intergenic not near genes chr3L 4858360 intergenic not near genes chr3L 4858412 intergenic not near genes chr3L_4_4855001 chr3L_4855001 RAL-810 940 chr3L 4901132 4901158 chr3L 4907322 4907344 diver 9 6189 2.5 1.0 1.8 3.2 6212 chr3L 4901132 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907344 intergenic not near genes chr3L_9_4900001 chr3L_4900001 RAL-810 941 chr3L 4907980 4907983 chr3L 4908056 4908059 4 76 1.0 0.5 0.8 2.2 79 chr3L 4907980 intergenic not near genes chr3L 4908020 intergenic not near genes chr3L 4908059 intergenic not near genes chr3L_4_4905001 chr3L_4905001 RAL-810 942 chr3L 5015953 5015976 chr3L 5016038 5016062 6 86 1.5 4.0 2.8 1.6 109 chr3L 5015953 intron Con - chr3L 5016008 intron Con - chr3L 5016062 intron Con - chr3L_6_5015001 chr3L_5015001 RAL-810 943 chr3L 5030772 5030788 chr3L 5030848 5030864 8 76 4.5 2.0 3.2 1.9 92 chr3L 5030772 intron Con - chr3L 5030818 intron Con - chr3L 5030864 intron Con - chr3L_8_5030001 chr3L_5030001 RAL-810 944 chr3L 5045454 5045487 chr3L 5050235 5050268 Doc 9 4781 3.5 3.5 3.5 2.0 4814 chr3L 5045454 intron Con - chr3L 5047861 intron Con - chr3L 5050268 intron Con - chr3L_9_5045001 chr3L_5045001 RAL-810 945 chr3L 5079930 5079960 chr3L 5080016 5080047 4 87 1.5 1.5 1.5 1.6 117 chr3L 5079930 intergenic not near genes chr3L 5079988 intergenic not near genes chr3L 5080047 intergenic not near genes chr3L_4_5075001 chr3L_5075001 RAL-810 946 chr3L 5101209 5101231 chr3L 5101289 5101311 4 79 0.5 2.0 1.2 1.8 102 chr3L 5101209 intergenic not near genes chr3L 5101260 intergenic not near genes chr3L 5101311 intergenic not near genes chr3L_4_5100001 chr3L_5100001 RAL-810 947 chr3L 5103613 5103628 chr3L 5103693 5103708 5 80 7.5 0.0 3.8 1.0 95 chr3L 5103613 intergenic not near genes chr3L 5103660 intergenic not near genes chr3L 5103708 intergenic not near genes chr3L_5_5100001 chr3L_5100001 RAL-810 948 chr3L 5104487 5104511 chr3L 5124620 5124645 5 20134 2.0 2.0 2.0 1.7 20158 chr3L 5104487 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124645 intergenic not near genes chr3L_5_5110001 chr3L_5110001 RAL-810 949 chr3L 5220828 5220854 chr3L 5220923 5220949 14 95 2.5 3.0 2.8 3.7 121 chr3L 5220828 intron shep - chr3L 5220888 intron shep - chr3L 5220949 intron shep - chr3L_14_5220001 chr3L_5220001 RAL-810 950 chr3L 5403462 5403471 chr3L 5403851 5403869 4 395 2.0 2.0 2.0 1.3 407 chr3L 5403462 intergenic not near genes chr3L 5403666 intergenic not near genes chr3L 5403869 intergenic not near genes chr3L_4_5400001 chr3L_5400001 RAL-810 951 chr3L 5458060 5458089 chr3L 5466662 5466666 Max-element 4 8596 3.0 0.5 1.8 1.4 8606 chr3L 5458060 intergenic not near genes chr3L 5462363 intergenic not near genes chr3L 5466666 intergenic not near genes chr3L_4_5460001 chr3L_5460001 RAL-810 952 chr3L 5498417 5498432 chr3L 5498494 5498508 4 76 0.0 2.5 1.2 1.8 91 chr3L 5498417 exon blanks - chr3L 5498462 exon blanks - chr3L 5498508 exon blanks - chr3L_4_5495001 chr3L_5495001 RAL-810 953 chr3L 5537736 5537755 chr3L 5538077 5538094 jockey 11 339 0.0 5.5 2.8 2.9 358 chr3L 5537736 intergenic not near genes chr3L 5537915 intergenic CG10625 - chr3L 5538094 intergenic CG10625 - chr3L_11_5535001 chr3L_5535001 RAL-810 954 chr3L 5581466 5581499 chr3L 5581552 5581585 8 86 2.5 4.0 3.2 1.9 119 chr3L 5581466 intergenic not near genes chr3L 5581526 intergenic not near genes chr3L 5581585 intergenic not near genes chr3L_8_5580001 chr3L_5580001 RAL-810 955 chr3L 5683264 5683288 chr3L 5683351 5683375 8 87 0.0 2.5 1.2 3.6 111 chr3L 5683264 intron sif + chr3L 5683320 intron sif + chr3L 5683375 intron sif + chr3L_8_5680001 chr3L_5680001 RAL-810 956 chr3L 5910034 5910062 chr3L 5910275 5910303 pogo 4 241 1.0 0.0 0.5 2.7 269 chr3L 5910034 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910303 intron CG13288 + chr3L_4_5910001 chr3L_5910001 RAL-810 957 chr3L 5910383 5910412 chr3L 5910819 5910848 9 435 0.5 2.0 1.2 4.1 465 chr3L 5910383 intron CG13288 + chr3L 5910616 intron CG13288 + chr3L 5910848 intron CG13288 + chr3L_9_5910001 chr3L_5910001 RAL-810 958 chr3L 5926333 5926351 chr3L 5926518 5926541 BS 6 189 0.5 3.0 1.8 2.1 208 chr3L 5926333 intron Vap-33B + chr3L 5926437 intron Vap-33B + chr3L 5926541 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-810 959 chr3L 5938570 5938593 chr3L 5938661 5938667 9 88 0.5 2.0 1.2 4.1 97 chr3L 5938570 intron CG33993 - chr3L 5938618 intron CG33993 - chr3L 5938667 intron CG33993 - chr3L_9_5935001 chr3L_5935001 RAL-810 960 chr3L 6001683 6001710 chr3L 6004383 6004410 jockey 11 2700 3.0 2.5 2.8 2.9 2727 chr3L 6001683 intron PVRAP + chr3L 6003046 intron PVRAP + chr3L 6004410 intron PVRAP + chr3L_11_6000001 chr3L_6000001 RAL-810 961 chr3L 6040369 6040394 chr3L 6042725 6042750 Doc 8 2356 1.0 4.0 2.5 2.3 2381 chr3L 6040369 intergenic Jon65Aiv + chr3L 6041560 intergenic not near genes chr3L 6042750 intergenic not near genes chr3L_8_6040001 chr3L_6040001 RAL-810 962 chr3L 6052660 6052664 chr3L 6052733 6052748 4 82 6.0 4.0 5.0 0.7 88 chr3L 6052660 exon Jon65Aii + chr3L 6052704 intron Jon65Aii + chr3L 6052748 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-810 963 chr3L 6063322 6063346 chr3L 6063448 6063472 10 126 2.0 4.5 3.2 2.4 150 chr3L 6063322 intergenic CG10472 - chr3L 6063397 intergenic CG10472 - chr3L 6063472 intergenic not near genes chr3L_10_6060001 chr3L_6060001 RAL-810 964 chr3L 6116701 6116722 chr3L 6116785 6116806 8 84 1.5 5.0 3.2 1.9 105 chr3L 6116701 intron Ets65A + chr3L 6116754 intron Ets65A + chr3L 6116806 intron Ets65A + chr3L_8_6115001 chr3L_6115001 RAL-810 965 chr3L 6159878 6159894 chr3L 6159968 6159984 6 90 2.5 1.5 2.0 2.0 106 chr3L 6159878 intergenic not near genes chr3L 6159931 intergenic not near genes chr3L 6159984 intergenic not near genes chr3L_6_6155001 chr3L_6155001 RAL-810 966 chr3L 6220916 6220947 chr3L 6230066 6230099 roo 12 9152 3.0 5.5 4.2 2.3 9183 chr3L 6220916 5` UTR pncr008:3L + chr3L 6225508 intergenic not near genes chr3L 6230099 intergenic not near genes chr3L_12_6225001 chr3L_6225001 RAL-810 967 chr3L 6325371 6325381 chr3L 6325454 6325464 5 83 0.0 4.0 2.0 1.7 93 chr3L 6325371 intergenic Or65b + chr3L 6325418 intergenic Or65b + chr3L 6325464 intergenic Or65b + chr3L_5_6325001 chr3L_6325001 RAL-810 968 chr3L 6335014 6335041 chr3L 6335485 6335512 297 6 469 3.5 6.5 5.0 1.0 498 chr3L 6335014 intron CG13300 - chr3L 6335263 intron CG13300 - chr3L 6335512 intron CG13300 - chr3L_6_6335001 chr3L_6335001 RAL-810 969 chr3L 6353386 6353409 chr3L 6353465 6353487 4 77 2.5 2.0 2.2 1.2 101 chr3L 6353386 intergenic not near genes chr3L 6353436 intergenic not near genes chr3L 6353487 intergenic not near genes chr3L_4_6350001 chr3L_6350001 RAL-810 970 chr3L 6405667 6405688 chr3L 6432131 6432147 roo 11 26464 3.0 6.0 4.5 2.0 26480 chr3L 6405667 intron CG42747 + chr3L 6418907 intron CG42747 + chr3L 6432147 intron CG42747 + chr3L_11_6415001 chr3L_6415001 RAL-810 971 chr3L 6516513 6516538 chr3L 6516621 6516644 10 107 1.0 1.5 1.2 4.5 131 chr3L 6516513 intron sfl + chr3L 6516578 intron sfl + chr3L 6516644 intron sfl + chr3L_10_6515001 chr3L_6515001 RAL-810 972 chr3L 6562839 6562867 chr3L 6562919 6562947 5 80 4.0 0.5 2.2 1.6 108 chr3L 6562839 intron CG18769 + chr3L 6562893 intron CG18769 + chr3L 6562947 intron CG18769 + chr3L_5_6560001 chr3L_6560001 RAL-810 973 chr3L 6582463 6582493 chr3L 6582564 6582595 4 102 4.0 0.5 2.2 1.2 132 chr3L 6582463 intron,intron CG18769 +,jv - chr3L 6582529 intron,intron CG18769 +,jv - chr3L 6582595 intron,intron CG18769 +,jv - chr3L_4_6580001 chr3L_6580001 RAL-810 974 chr3L 6642873 6642889 chr3L 6642953 6642969 6 80 1.5 0.0 0.8 3.3 96 chr3L 6642873 intergenic CR45239 + chr3L 6642921 intergenic CR45239 + chr3L 6642969 intergenic CR45239 + chr3L_6_6640001 chr3L_6640001 RAL-810 975 chr3L 6652082 6652110 chr3L 6652160 6652188 10 78 4.0 4.0 4.0 2.0 106 chr3L 6652082 intergenic not near genes chr3L 6652135 intergenic not near genes chr3L 6652188 intergenic not near genes chr3L_10_6650001 chr3L_6650001 RAL-810 976 chr3L 6781126 6781155 chr3L 6783137 6783168 Doc 9 2013 2.0 7.0 4.5 1.6 2042 chr3L 6781126 intergenic not near genes chr3L 6782147 intergenic not near genes chr3L 6783168 intergenic not near genes chr3L_9_6780001 chr3L_6780001 RAL-810 977 chr3L 6844379 6844388 chr3L 6844525 6844534 5 146 2.5 3.5 3.0 1.2 155 chr3L 6844379 intergenic not near genes chr3L 6844456 intergenic not near genes chr3L 6844534 intergenic not near genes chr3L_5_6840001 chr3L_6840001 RAL-810 978 chr3L 6855934 6855956 chr3L 6860716 6860740 Doc 4 4784 2.5 2.0 2.2 1.2 4806 chr3L 6855934 intergenic not near genes chr3L 6858337 intergenic not near genes chr3L 6860740 intergenic not near genes chr3L_4_6855001 chr3L_6855001 RAL-810 979 chr3L 6887518 6887547 chr3L 6895008 6895039 roo 10 7492 2.5 2.0 2.2 3.1 7521 chr3L 6887518 intergenic not near genes chr3L 6891278 intergenic not near genes chr3L 6895039 intergenic not near genes chr3L_10_6890001 chr3L_6890001 RAL-810 980 chr3L 6898623 6898649 chr3L 6898700 6898710 10 75 0.5 4.5 2.5 2.9 87 chr3L 6898623 intergenic not near genes chr3L 6898666 intergenic not near genes chr3L 6898710 intergenic not near genes chr3L_10_6895001 chr3L_6895001 RAL-810 981 chr3L 6934340 6934361 chr3L 6934451 6934472 14 111 1.0 3.5 2.2 4.4 132 chr3L 6934340 exon CG14820 + chr3L 6934406 intron CG14820 + chr3L 6934472 intron CG14820 + chr3L_14_6930001 chr3L_6930001 RAL-810 982 chr3L 6974502 6974523 chr3L 6974603 6974624 5 101 0.0 4.5 2.2 1.6 122 chr3L 6974502 intron Galphai - chr3L 6974563 intron Galphai - chr3L 6974624 intron Galphai - chr3L_5_6970001 chr3L_6970001 RAL-810 983 chr3L 6990719 6990740 chr3L 6990799 6990820 8 80 1.5 2.5 2.0 2.7 101 chr3L 6990719 5` UTR bin + chr3L 6990770 5` UTR bin + chr3L 6990820 5` UTR bin + chr3L_8_6990001 chr3L_6990001 RAL-810 984 chr3L 6994887 6994916 chr3L 6995498 6995527 BS 5 611 0.0 2.5 1.2 2.3 640 chr3L 6994887 intergenic bin + chr3L 6995207 intergenic not near genes chr3L 6995527 intergenic not near genes chr3L_5_6995001 chr3L_6995001 RAL-810 985 chr3L 7129971 7129986 chr3L 7130163 7130178 BS 6 192 1.0 3.5 2.2 1.9 207 chr3L 7129971 intergenic CG15829 + chr3L 7130074 intergenic CG15829 + chr3L 7130178 intergenic not near genes chr3L_6_7130001 chr3L_7130001 RAL-810 986 chr3L 7187398 7187414 chr3L 7187480 7187493 11 82 0.0 2.5 1.2 5.0 95 chr3L 7187398 intron Dscam2 - chr3L 7187446 intron Dscam2 - chr3L 7187493 intron Dscam2 - chr3L_11_7185001 chr3L_7185001 RAL-810 987 chr3L 7209397 7209417 chr3L 7209475 7209484 4 76 1.0 1.5 1.2 1.8 87 chr3L 7209397 intergenic not near genes chr3L 7209440 intergenic not near genes chr3L 7209484 intergenic not near genes chr3L_4_7205001 chr3L_7205001 RAL-810 988 chr3L 7315486 7315502 chr3L 7315579 7315595 4 93 1.0 4.0 2.5 1.1 109 chr3L 7315486 intergenic not near genes chr3L 7315540 intergenic not near genes chr3L 7315595 intergenic not near genes chr3L_4_7315001 chr3L_7315001 RAL-810 989 chr3L 7371179 7371208 chr3L 7371262 7371292 10 84 3.0 2.0 2.5 2.9 113 chr3L 7371179 intron akirin + chr3L 7371236 intron akirin + chr3L 7371292 intron akirin + chr3L_10_7370001 chr3L_7370001 RAL-810 990 chr3L 7377316 7377342 chr3L 7380420 7380447 297 6 3104 5.5 4.0 4.8 1.0 3131 chr3L 7377316 intron SMSr - chr3L 7378882 intron SMSr - chr3L 7380447 intron SMSr - chr3L_6_7375001 chr3L_7375001 RAL-810 991 chr3L 7426006 7426042 chr3L 7426388 7426424 15 382 2.0 3.0 2.5 4.3 418 chr3L 7426006 intron CG42458 + chr3L 7426215 intron CG42458 + chr3L 7426424 intron CG42458 + chr3L_15_7425001 chr3L_7425001 RAL-810 992 chr3L 7498763 7498792 chr3L 7503540 7503567 F-element 8 4777 1.5 5.0 3.2 1.9 4804 chr3L 7498763 5` UTR CG8539 - chr3L 7501165 intergenic not near genes chr3L 7503567 intergenic not near genes chr3L_8_7500001 chr3L_7500001 RAL-810 993 chr3L 7574851 7574859 chr3L 7574928 7574936 5 77 0.0 0.0 0.0 5.0 85 chr3L 7574851 intergenic not near genes chr3L 7574894 intergenic not near genes chr3L 7574936 intergenic not near genes chr3L_5_7570001 chr3L_7570001 RAL-810 994 chr3L 7581630 7581654 chr3L 7581714 7581716 5 79 0.5 3.5 2.0 1.7 86 chr3L 7581630 intergenic not near genes chr3L 7581673 intergenic not near genes chr3L 7581716 intergenic not near genes chr3L_5_7580001 chr3L_7580001 RAL-810 995 chr3L 7591153 7591159 chr3L 7591244 7591245 7 90 7.5 3.0 5.2 1.1 92 chr3L 7591153 intergenic CG7716 - chr3L 7591199 intergenic CG7716 - chr3L 7591245 intergenic CG7716 - chr3L_7_7590001 chr3L_7590001 RAL-810 996 chr3L 7793720 7793742 chr3L 7800772 7800794 297 6 7052 4.0 5.0 4.5 1.1 7074 chr3L 7793720 intron CG32369 - chr3L 7797257 intron CG32369 - chr3L 7800794 intron CG32369 - chr3L_6_7795001 chr3L_7795001 RAL-810 997 chr3L 7814705 7814734 chr3L 7814790 7814819 11 85 3.5 3.5 3.5 2.4 114 chr3L 7814705 3` UTR Pdp1 - chr3L 7814762 3` UTR Pdp1 - chr3L 7814819 3` UTR Pdp1 - chr3L_11_7810001 chr3L_7810001 RAL-810 998 chr3L 7886519 7886547 chr3L 7889037 7889065 Stalker4 7 2518 1.0 2.5 1.8 2.5 2546 chr3L 7886519 intron CG32365 + chr3L 7887792 intron CG32365 + chr3L 7889065 intron CG32365 + chr3L_7_7885001 chr3L_7885001 RAL-810 999 chr3L 7916830 7916855 chr3L 7926001 7926026 roo 9 9171 1.5 3.5 2.5 2.6 9196 chr3L 7916830 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926026 3` UTR syd - chr3L_9_7920001 chr3L_7920001 RAL-810 1000 chr3L 7985364 7985397 chr3L 7987692 7987725 NOF 11 2326 3.0 3.0 3.0 2.8 2361 chr3L 7985364 intron nmo + chr3L 7986544 intron nmo + chr3L 7987725 intron nmo + chr3L_11_7985001 chr3L_7985001 RAL-810 1001 chr3L 8019700 8019730 chr3L 8024112 8024143 NOF 6 4412 3.5 4.5 4.0 1.2 4443 chr3L 8019700 intron nmo + chr3L 8021922 intron nmo + chr3L 8024143 intron nmo + chr3L_6_8020001 chr3L_8020001 RAL-810 1002 chr3L 8102617 8102642 chr3L 8102759 8102784 8 141 3.0 6.0 4.5 1.5 167 chr3L 8102617 intron Ect4 + chr3L 8102700 intron Ect4 + chr3L 8102784 intron Ect4 + chr3L_8_8100001 chr3L_8100001 RAL-810 1003 chr3L 8149761 8149794 chr3L 8149867 8149898 6 106 0.0 3.5 1.8 2.1 137 chr3L 8149761 intron CG13676 - chr3L 8149830 intron CG13676 - chr3L 8149898 intron CG13676 - chr3L_6_8145001 chr3L_8145001 RAL-810 1004 chr3L 8158190 8158324 chr3L 8158275 8158409 9 85 0.0 0.0 0.0 9.0 219 chr3L 8158190 intron CG42445 - chr3L 8158300 intron CG42445 - chr3L 8158409 intron CG42445 - chr3L_9_8155001 chr3L_8155001 RAL-810 1005 chr3L 8295794 8295824 chr3L 8295952 8295982 10 158 2.0 5.0 3.5 2.2 188 chr3L 8295794 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8295982 intergenic not near genes chr3L_10_8295001 chr3L_8295001 RAL-810 1006 chr3L 8371735 8371761 chr3L 8371821 8371847 4 86 0.0 3.0 1.5 1.6 112 chr3L 8371735 intergenic not near genes chr3L 8371791 intergenic not near genes chr3L 8371847 intergenic not near genes chr3L_4_8370001 chr3L_8370001 RAL-810 1007 chr3L 8443571 8443582 chr3L 8443652 8443663 7 81 2.0 4.0 3.0 1.8 92 chr3L 8443571 3` UTR CG6983 - chr3L 8443617 3` UTR CG6983 - chr3L 8443663 3` UTR CG6983 - chr3L_7_8440001 chr3L_8440001 RAL-810 1008 chr3L 8498302 8498330 chr3L 8505769 8505797 blood 11 7466 2.5 4.0 3.2 2.6 7495 chr3L 8498302 intron CG43163 - chr3L 8502050 intron CG43163 - chr3L 8505797 intron CG43163 - chr3L_11_8500001 chr3L_8500001 RAL-810 1009 chr3L 8579858 8579878 chr3L 8579936 8579958 8 78 2.0 4.0 3.0 2.0 100 chr3L 8579858 intron CG43078 + chr3L 8579908 intron CG43078 + chr3L 8579958 intron CG43078 + chr3L_8_8575001 chr3L_8575001 RAL-810 1010 chr3L 8589576 8589581 chr3L 8589663 8589668 4 87 3.0 2.0 2.5 1.1 92 chr3L 8589576 intron CG43078 + chr3L 8589622 intron CG43078 + chr3L 8589668 intron CG43078 + chr3L_4_8585001 chr3L_8585001 RAL-810 1011 chr3L 8682614 8682645 chr3L 8682701 8682732 18 87 2.0 1.5 1.8 6.4 118 chr3L 8682614 intergenic not near genes chr3L 8682673 intergenic not near genes chr3L 8682732 intergenic not near genes chr3L_18_8680001 chr3L_8680001 RAL-810 1012 chr3L 8692994 8693024 chr3L 8693100 8693128 16 105 2.5 3.5 3.0 4.0 134 chr3L 8692994 5` UTR CR44526 + chr3L 8693061 5` UTR CR44526 + chr3L 8693128 5` UTR CR44526 + chr3L_16_8690001 chr3L_8690001 RAL-810 1013 chr3L 8772065 8772085 chr3L 8772143 8772163 7 78 2.5 5.5 4.0 1.4 98 chr3L 8772065 intron Fhos + chr3L 8772114 intron Fhos + chr3L 8772163 intron Fhos + chr3L_7_8770001 chr3L_8770001 RAL-810 1014 chr3L 8791271 8791305 chr3L 8796691 8796725 I-element 12 5420 3.5 6.0 4.8 2.1 5454 chr3L 8791271 exon Fhos + chr3L 8793998 intron Fhos + chr3L 8796725 intron Fhos + chr3L_12_8790001 chr3L_8790001 RAL-810 1015 chr3L 8859320 8859338 chr3L 8859408 8859426 4 88 2.0 4.0 3.0 1.0 106 chr3L 8859320 intron dally + chr3L 8859373 intron dally + chr3L 8859426 intron dally + chr3L_4_8855001 chr3L_8855001 RAL-810 1016 chr3L 9030431 9030456 chr3L 9030510 9030531 5 78 2.0 0.0 1.0 2.5 100 chr3L 9030431 intergenic not near genes chr3L 9030481 intergenic not near genes chr3L 9030531 intergenic not near genes chr3L_5_9030001 chr3L_9030001 RAL-810 1017 chr3L 9067317 9067349 chr3L 9067396 9067428 13 79 4.0 3.0 3.5 2.9 111 chr3L 9067317 3` UTR CG4911 - chr3L 9067372 3` UTR CG4911 - chr3L 9067428 3` UTR CG4911 - chr3L_13_9065001 chr3L_9065001 RAL-810 1018 chr3L 9076933 9076950 chr3L 9084493 9084510 412 11 7559 4.5 7.0 5.8 1.6 7577 chr3L 9076933 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084510 exon Tequila + chr3L_11_9080001 chr3L_9080001 RAL-810 1019 chr3L 9130557 9130572 chr3L 9134318 9134333 412 7 3760 5.5 1.0 3.2 1.7 3776 chr3L 9130557 intergenic bol - chr3L 9132445 intergenic not near genes chr3L 9134333 intergenic Dhpr + chr3L_7_9130001 chr3L_9130001 RAL-810 1020 chr3L 9164695 9164724 chr3L 9166162 9166191 hobo 13 1467 2.5 4.0 3.2 3.1 1496 chr3L 9164695 intron Rdl - chr3L 9165443 intron Rdl - chr3L 9166191 intron Rdl - chr3L_13_9165001 chr3L_9165001 RAL-810 1021 chr3L 9219243 9219274 chr3L 9219915 9219946 jockey 4 671 2.0 2.0 2.0 1.3 703 chr3L 9219243 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219946 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-810 1022 chr3L 9234528 9234554 chr3L 9234739 9234765 8 210 2.0 1.5 1.8 2.9 237 chr3L 9234528 intergenic not near genes chr3L 9234646 intergenic not near genes chr3L 9234765 intergenic CG4483 - chr3L_8_9230001 chr3L_9230001 RAL-810 1023 chr3L 9270633 9270646 chr3L 9278388 9278401 roo 6 7755 2.0 1.5 1.8 2.1 7768 chr3L 9270633 intron GluRIB + chr3L 9274517 intron GluRIB + chr3L 9278401 exon GluRIB + chr3L_6_9270001 chr3L_9270001 RAL-810 1024 chr3L 9314047 9314053 chr3L 9314125 9314131 4 78 0.0 1.0 0.5 2.7 84 chr3L 9314047 intergenic not near genes chr3L 9314089 intergenic not near genes chr3L 9314131 intergenic not near genes chr3L_4_9310001 chr3L_9310001 RAL-810 1025 chr3L 9359586 9359619 chr3L 9359677 9359710 7 91 2.5 1.5 2.0 2.3 124 chr3L 9359586 3` UTR CG32039 + chr3L 9359648 3` UTR CG32039 + chr3L 9359710 3` UTR CG32039 + chr3L_7_9355001 chr3L_9355001 RAL-810 1026 chr3L 9437941 9437964 chr3L 9438052 9438075 8 111 4.0 3.0 3.5 1.8 134 chr3L 9437941 intron MTF-1 + chr3L 9438008 intron MTF-1 + chr3L 9438075 intron MTF-1 + chr3L_8_9435001 chr3L_9435001 RAL-810 1027 chr3L 9443511 9443544 chr3L 9445298 9445331 S-element 15 1787 3.5 7.5 5.5 2.3 1820 chr3L 9443511 intron CG33926 + chr3L 9444421 intron CG33926 + chr3L 9445331 intron CG33926 + chr3L_15_9440001 chr3L_9440001 RAL-810 1028 chr3L 9492404 9492428 chr3L 9492485 9492509 7 77 3.5 0.0 1.8 2.5 105 chr3L 9492404 intergenic CG32037 - chr3L 9492456 intergenic CG32037 - chr3L 9492509 intergenic CG32037 - chr3L_7_9490001 chr3L_9490001 RAL-810 1029 chr3L 9498200 9498229 chr3L 9498277 9498306 9 77 4.0 1.5 2.8 2.4 106 chr3L 9498200 intron path - chr3L 9498253 intron path - chr3L 9498306 intron path - chr3L_9_9495001 chr3L_9495001 RAL-810 1030 chr3L 9510943 9510957 chr3L 9511022 9511033 6 78 0.0 2.5 1.2 2.7 90 chr3L 9510943 intron RpS9 - chr3L 9510988 intron RpS9 - chr3L 9511033 intron RpS9 - chr3L_6_9510001 chr3L_9510001 RAL-810 1031 chr3L 9532487 9532506 chr3L 9532583 9532602 6 96 0.0 1.5 0.8 3.3 115 chr3L 9532487 intergenic not near genes chr3L 9532544 intergenic not near genes chr3L 9532602 intergenic not near genes chr3L_6_9530001 chr3L_9530001 RAL-810 1032 chr3L 9571899 9571926 chr3L 9572247 9572274 jockey 9 348 4.0 3.0 3.5 2.0 375 chr3L 9571899 intron CG42673 + chr3L 9572086 intron CG42673 + chr3L 9572274 intron CG42673 + chr3L_9_9570001 chr3L_9570001 RAL-810 1033 chr3L 9575910 9575937 chr3L 9580987 9581014 jockey 4 5077 2.0 2.0 2.0 1.3 5104 chr3L 9575910 intron CG42673 + chr3L 9578462 intron CG42673 + chr3L 9581014 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-810 1034 chr3L 9629737 9629767 chr3L 9629813 9629843 11 76 2.0 0.5 1.2 5.0 106 chr3L 9629737 intron CG8336 + chr3L 9629790 intron CG8336 + chr3L 9629843 intron CG8336 + chr3L_11_9625001 chr3L_9625001 RAL-810 1035 chr3L 9657958 9657981 chr3L 9658033 9658058 6 76 2.5 3.5 3.0 1.5 100 chr3L 9657958 intron,intron fry -,CG33696 + chr3L 9658008 intron,intron fry -,CG33696 + chr3L 9658058 intron,intron fry -,CG33696 + chr3L_6_9655001 chr3L_9655001 RAL-810 1036 chr3L 9675847 9675878 chr3L 9675930 9675961 15 83 2.5 3.5 3.0 3.8 114 chr3L 9675847 intron fry - chr3L 9675904 intron fry - chr3L 9675961 intron fry - chr3L_15_9675001 chr3L_9675001 RAL-810 1037 chr3L 9699935 9699950 chr3L 9700022 9700038 11 87 4.5 3.0 3.8 2.3 103 chr3L 9699935 3` UTR UbcD4 + chr3L 9699986 3` UTR UbcD4 + chr3L 9700038 3` UTR UbcD4 + chr3L_11_9695001 chr3L_9695001 RAL-810 1038 chr3L 9715596 9715628 chr3L 9715672 9715705 6 76 2.0 3.5 2.8 1.6 109 chr3L 9715596 intron vsg + chr3L 9715650 intron vsg + chr3L 9715705 intron vsg + chr3L_6_9715001 chr3L_9715001 RAL-810 1039 chr3L 9716724 9716743 chr3L 9718505 9718526 11 1782 21.5 19.5 20.5 0.5 1802 chr3L 9716724 3` UTR vsg + chr3L 9717625 3` UTR vsg + chr3L 9718526 exon CG18178 - chr3L_11_9715001 chr3L_9715001 RAL-810 1040 chr3L 9775384 9775393 chr3L 9775744 9775752 4 360 0.0 3.5 1.8 1.4 368 chr3L 9775384 intron CG8177 + chr3L 9775568 intron CG8177 + chr3L 9775752 intron CG8177 + chr3L_4_9775001 chr3L_9775001 RAL-810 1041 chr3L 9848516 9848549 chr3L 9848591 9848625 8 72 2.5 0.5 1.5 3.2 109 chr3L 9848516 intron RasGAP1 - chr3L 9848570 intron RasGAP1 - chr3L 9848625 intron RasGAP1 - chr3L_8_9845001 chr3L_9845001 RAL-810 1042 chr3L 9853019 9853037 chr3L 9853119 9853137 8 100 1.5 6.5 4.0 1.6 118 chr3L 9853019 intron RasGAP1 - chr3L 9853078 intron RasGAP1 - chr3L 9853137 intron RasGAP1 - chr3L_8_9850001 chr3L_9850001 RAL-810 1043 chr3L 9895358 9895390 chr3L 9895438 9895458 9 78 2.5 3.0 2.8 2.4 100 chr3L 9895358 3` UTR CG6707 - chr3L 9895408 3` UTR CG6707 - chr3L 9895458 3` UTR CG6707 - chr3L_9_9895001 chr3L_9895001 RAL-810 1044 chr3L 10127737 10127761 chr3L 10127814 10127823 10 74 5.5 2.0 3.8 2.1 86 chr3L 10127737 intron dpr6 + chr3L 10127780 intron dpr6 + chr3L 10127823 intron dpr6 + chr3L_10_10125001 chr3L_10125001 RAL-810 1045 chr3L 10148407 10148429 chr3L 10148493 10148515 5 86 4.0 2.5 3.2 1.2 108 chr3L 10148407 3` UTR dpr10 - chr3L 10148461 3` UTR dpr10 - chr3L 10148515 3` UTR dpr10 - chr3L_5_10145001 chr3L_10145001 RAL-810 1046 chr3L 10175869 10175891 chr3L 10176096 10176116 7 225 4.0 0.5 2.2 2.2 247 chr3L 10175869 intron dpr10 - chr3L 10175992 intron dpr10 - chr3L 10176116 intron dpr10 - chr3L_7_10175001 chr3L_10175001 RAL-810 1047 chr3L 10214735 10214828 chr3L 10214822 10214929 8 94 0.0 0.0 0.0 8.0 194 chr3L 10214735 intergenic not near genes chr3L 10214832 intergenic not near genes chr3L 10214929 intergenic not near genes chr3L_8_10210001 chr3L_10210001 RAL-810 1048 chr3L 10258932 10258950 chr3L 10259104 10259123 5 171 1.5 1.5 1.5 2.0 191 chr3L 10258932 intergenic not near genes chr3L 10259028 intergenic not near genes chr3L 10259123 intergenic not near genes chr3L_5_10255001 chr3L_10255001 RAL-810 1049 chr3L 10272506 10272531 chr3L 10272608 10272638 4 106 3.5 2.5 3.0 1.0 132 chr3L 10272506 intergenic not near genes chr3L 10272572 intergenic not near genes chr3L 10272638 intergenic not near genes chr3L_4_10270001 chr3L_10270001 RAL-810 1050 chr3L 10298669 10298701 chr3L 10298755 10298788 8 86 0.5 4.0 2.2 2.5 119 chr3L 10298669 intergenic not near genes chr3L 10298728 intergenic not near genes chr3L 10298788 intergenic not near genes chr3L_8_10295001 chr3L_10295001 RAL-810 1051 chr3L 10308753 10308769 chr3L 10308830 10308846 7 77 3.5 4.0 3.8 1.5 93 chr3L 10308753 intergenic not near genes chr3L 10308800 intergenic not near genes chr3L 10308846 intergenic not near genes chr3L_7_10305001 chr3L_10305001 RAL-810 1052 chr3L 10397302 10397328 chr3L 10397381 10397407 9 79 1.5 1.5 1.5 3.6 105 chr3L 10397302 intergenic not near genes chr3L 10397354 intergenic not near genes chr3L 10397407 intergenic not near genes chr3L_9_10395001 chr3L_10395001 RAL-810 1053 chr3L 10414943 10414974 chr3L 10417311 10417346 Doc 12 2371 0.5 2.5 1.5 4.8 2403 chr3L 10414943 intergenic CG12362 + chr3L 10416144 intergenic not near genes chr3L 10417346 intergenic not near genes chr3L_12_10415001 chr3L_10415001 RAL-810 1054 chr3L 10417567 10417593 chr3L 10417644 10417670 6 76 3.0 2.0 2.5 1.7 103 chr3L 10417567 intergenic not near genes chr3L 10417618 intergenic not near genes chr3L 10417670 intergenic not near genes chr3L_6_10415001 chr3L_10415001 RAL-810 1055 chr3L 10450697 10450710 chr3L 10450777 10450790 5 80 0.0 5.5 2.8 1.3 93 chr3L 10450697 intergenic not near genes chr3L 10450744 intergenic not near genes chr3L 10450790 intergenic not near genes chr3L_5_10450001 chr3L_10450001 RAL-810 1056 chr3L 10485085 10485112 chr3L 10485246 10485274 10 162 1.5 2.5 2.0 3.3 189 chr3L 10485085 intron A2bp1 + chr3L 10485180 intron A2bp1 + chr3L 10485274 intron A2bp1 + chr3L_10_10485001 chr3L_10485001 RAL-810 1057 chr3L 10505642 10505672 chr3L 10505718 10505748 6 76 1.0 3.0 2.0 2.0 106 chr3L 10505642 intron A2bp1 + chr3L 10505695 intron A2bp1 + chr3L 10505748 intron A2bp1 + chr3L_6_10505001 chr3L_10505001 RAL-810 1058 chr3L 10537223 10537254 chr3L 10537299 10537330 7 76 1.5 3.0 2.2 2.2 107 chr3L 10537223 intron A2bp1 + chr3L 10537276 intron A2bp1 + chr3L 10537330 intron A2bp1 + chr3L_7_10535001 chr3L_10535001 RAL-810 1059 chr3L 10584281 10584299 chr3L 10584368 10584385 4 87 4.5 3.5 4.0 0.8 104 chr3L 10584281 intron A2bp1 + chr3L 10584333 intron A2bp1 + chr3L 10584385 intron A2bp1 + chr3L_4_10580001 chr3L_10580001 RAL-810 1060 chr3L 10600456 10600467 chr3L 10600538 10600549 5 82 4.5 0.0 2.2 1.6 93 chr3L 10600456 intergenic not near genes chr3L 10600502 intergenic not near genes chr3L 10600549 intergenic not near genes chr3L_5_10600001 chr3L_10600001 RAL-810 1061 chr3L 10621848 10621878 chr3L 10621934 10621965 5 87 3.5 1.5 2.5 1.4 117 chr3L 10621848 intergenic not near genes chr3L 10621906 intergenic not near genes chr3L 10621965 intergenic not near genes chr3L_5_10620001 chr3L_10620001 RAL-810 1062 chr3L 10705574 10705605 chr3L 10705652 10705682 6 77 1.0 3.0 2.0 2.0 108 chr3L 10705574 intergenic not near genes chr3L 10705628 intergenic not near genes chr3L 10705682 intergenic not near genes chr3L_6_10705001 chr3L_10705001 RAL-810 1063 chr3L 10721989 10722023 chr3L 10722071 10722105 10 82 4.0 0.0 2.0 3.3 116 chr3L 10721989 intergenic not near genes chr3L 10722047 intergenic not near genes chr3L 10722105 intergenic not near genes chr3L_10_10720001 chr3L_10720001 RAL-810 1064 chr3L 10745537 10745566 chr3L 10745617 10745646 14 80 3.0 4.5 3.8 2.9 109 chr3L 10745537 intergenic not near genes chr3L 10745592 intergenic not near genes chr3L 10745646 intergenic not near genes chr3L_14_10745001 chr3L_10745001 RAL-810 1065 chr3L 10790782 10790807 chr3L 10790878 10790904 6 97 2.0 2.0 2.0 2.0 122 chr3L 10790782 intergenic not near genes chr3L 10790843 intergenic not near genes chr3L 10790904 intergenic not near genes chr3L_6_10790001 chr3L_10790001 RAL-810 1066 chr3L 10842871 10842896 chr3L 10842949 10842986 9 86 0.0 0.5 0.2 7.5 115 chr3L 10842871 intergenic not near genes chr3L 10842928 intergenic not near genes chr3L 10842986 intergenic not near genes chr3L_9_10840001 chr3L_10840001 RAL-810 1067 chr3L 10868802 10868822 chr3L 10868884 10868904 7 82 0.0 4.0 2.0 2.3 102 chr3L 10868802 intron tna + chr3L 10868853 intron tna + chr3L 10868904 intron tna + chr3L_7_10865001 chr3L_10865001 RAL-810 1068 chr3L 10887362 10887377 chr3L 10887441 10887456 6 79 0.0 1.5 0.8 3.3 94 chr3L 10887362 intergenic not near genes chr3L 10887409 intergenic not near genes chr3L 10887456 intergenic not near genes chr3L_6_10885001 chr3L_10885001 RAL-810 1069 chr3L 10971285 10971295 chr3L 10971524 10971534 5 239 3.5 0.5 2.0 1.7 249 chr3L 10971285 intergenic not near genes chr3L 10971410 intergenic not near genes chr3L 10971534 intergenic not near genes chr3L_5_10970001 chr3L_10970001 RAL-810 1070 chr3L 11087061 11087089 chr3L 11088849 11088878 S-element 5 1788 1.5 0.0 0.8 2.8 1817 chr3L 11087061 intron JIL-1 - chr3L 11087970 intron JIL-1 - chr3L 11088878 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-810 1071 chr3L 11105297 11105306 chr3L 11107008 11107017 X-element 6 1711 7.5 2.0 4.8 1.0 1720 chr3L 11105297 intergenic not near genes chr3L 11106157 intergenic not near genes chr3L 11107017 3` UTR CG32073 - chr3L_6_11105001 chr3L_11105001 RAL-810 1072 chr3L 11127937 11127945 chr3L 11128040 11128048 5 103 3.0 3.5 3.2 1.2 111 chr3L 11127937 intron CG42575 + chr3L 11127992 intron CG42575 + chr3L 11128048 intron CG42575 + chr3L_5_11125001 chr3L_11125001 RAL-810 1073 chr3L 11135532 11135805 chr3L 11135762 11135890 13 96 0.5 0.5 0.5 8.7 358 chr3L 11135532 intergenic CG14143 + chr3L 11135711 intergenic CG14143 +,CG32082 + chr3L 11135890 intergenic CG32082 +,CG14143 + chr3L_13_11135001 chr3L_11135001 RAL-810 1074 chr3L 11224546 11224566 chr3L 11224668 11224688 6 122 5.5 3.0 4.2 1.2 142 chr3L 11224546 intron CG42671 + chr3L 11224617 intron CG42671 + chr3L 11224688 intron CG42671 + chr3L_6_11220001 chr3L_11220001 RAL-810 1075 chr3L 11245087 11245120 chr3L 11245179 11245212 8 91 3.0 4.0 3.5 1.8 125 chr3L 11245087 intergenic not near genes chr3L 11245150 intergenic not near genes chr3L 11245212 intergenic not near genes chr3L_8_11245001 chr3L_11245001 RAL-810 1076 chr3L 11264463 11264499 chr3L 11271415 11271451 17.6 10 6951 4.0 2.0 3.0 2.5 6988 chr3L 11264463 intergenic not near genes chr3L 11267957 intergenic not near genes chr3L 11271451 intergenic not near genes chr3L_10_11265001 chr3L_11265001 RAL-810 1077 chr3L 11271791 11271817 chr3L 11272068 11272087 14 276 3.5 6.5 5.0 2.3 296 chr3L 11271791 intergenic not near genes chr3L 11271939 intergenic not near genes chr3L 11272087 intergenic not near genes chr3L_14_11270001 chr3L_11270001 RAL-810 1078 chr3L 11329698 11329722 chr3L 11332903 11332926 jockey 4 3202 3.5 4.0 3.8 0.8 3228 chr3L 11329698 intergenic not near genes chr3L 11331312 intergenic not near genes chr3L 11332926 intergenic not near genes chr3L_4_11330001 chr3L_11330001 RAL-810 1079 chr3L 11435561 11435589 chr3L 11435730 11435758 7 169 4.5 3.5 4.0 1.4 197 chr3L 11435561 intergenic CG6149 -,CR44548 + chr3L 11435660 5` UTR CR44548 + chr3L 11435758 5` UTR CR44548 + chr3L_7_11435001 chr3L_11435001 RAL-810 1080 chr3L 11471588 11471611 chr3L 11471666 11471685 7 77 2.0 2.0 2.0 2.3 97 chr3L 11471588 intergenic not near genes chr3L 11471636 intergenic not near genes chr3L 11471685 intergenic not near genes chr3L_7_11470001 chr3L_11470001 RAL-810 1081 chr3L 11528238 11528262 chr3L 11528318 11528343 10 81 4.5 3.0 3.8 2.1 105 chr3L 11528238 intron Mob2 - chr3L 11528290 intron Mob2 - chr3L 11528343 intron Mob2 - chr3L_10_11525001 chr3L_11525001 RAL-810 1082 chr3L 11534832 11534859 chr3L 11534921 11534947 9 88 5.0 2.0 3.5 2.0 115 chr3L 11534832 intron Mob2 - chr3L 11534890 intron Mob2 - chr3L 11534947 intron Mob2 - chr3L_9_11530001 chr3L_11530001 RAL-810 1083 chr3L 11555921 11555948 chr3L 11556020 11556048 9 99 1.5 3.5 2.5 2.6 127 chr3L 11555921 intron Mob2 - chr3L 11555984 intron Mob2 - chr3L 11556048 intron Mob2 - chr3L_9_11555001 chr3L_11555001 RAL-810 1084 chr3L 11579558 11579585 chr3L 11579664 11579691 11 105 1.5 2.5 2.0 3.7 133 chr3L 11579558 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579691 intergenic CG43390 - chr3L_11_11575001 chr3L_11575001 RAL-810 1085 chr3L 11588733 11588757 chr3L 11588889 11588913 6 156 2.0 4.0 3.0 1.5 180 chr3L 11588733 intergenic not near genes chr3L 11588823 intergenic not near genes chr3L 11588913 intergenic not near genes chr3L_6_11585001 chr3L_11585001 RAL-810 1086 chr3L 11678111 11678121 chr3L 11678198 11678208 6 87 1.5 5.0 3.2 1.4 97 chr3L 11678111 intron CG32085 - chr3L 11678160 intron CG32085 - chr3L 11678208 intron CG32085 - chr3L_6_11675001 chr3L_11675001 RAL-810 1087 chr3L 11723092 11723115 chr3L 11727887 11727910 Doc 7 4795 4.0 4.0 4.0 1.4 4818 chr3L 11723092 3` UTR Bmcp + chr3L 11725501 intron Bmcp + chr3L 11727910 3` UTR Bmcp + chr3L_7_11725001 chr3L_11725001 RAL-810 1088 chr3L 11729682 11729705 chr3L 11729758 11729780 11 76 3.0 1.0 2.0 3.7 98 chr3L 11729682 exon CG32088 + chr3L 11729731 intron CG32088 + chr3L 11729780 exon CG32088 + chr3L_11_11725001 chr3L_11725001 RAL-810 1089 chr3L 11744020 11744041 chr3L 11744128 11744149 9 108 3.5 0.0 1.8 3.2 129 chr3L 11744020 exon CG6024 - chr3L 11744084 intron CG6024 - chr3L 11744149 intron CG6024 - chr3L_9_11740001 chr3L_11740001 RAL-810 1090 chr3L 7749470 7749471 chr3L 11777678 11777678 5 4028207 10.0 13.5 11.8 0.4 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_9760001 chr3L_9760001 RAL-810 1091 chr3L 11777678 11777678 chr3L 12163305 12163305 4 385627 12.5 9.5 11.0 0.3 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_4_11970001 chr3L_11970001 RAL-810 1092 chr3L 11864554 11864583 chr3L 11865848 11865878 pogo 6 1295 1.0 2.0 1.5 2.4 1324 chr3L 11864554 intron CG44837 - chr3L 11865216 intron CG44837 - chr3L 11865878 intron CG44837 - chr3L_6_11865001 chr3L_11865001 RAL-810 1093 chr3L 11936611 11936634 chr3L 11936691 11936698 4 76 0.0 6.0 3.0 1.0 87 chr3L 11936611 intron CG44837 - chr3L 11936654 intron CG44837 - chr3L 11936698 intron CG44837 - chr3L_4_11935001 chr3L_11935001 RAL-810 1094 chr3L 11943504 11943517 chr3L 11943605 11943618 4 101 1.0 6.0 3.5 0.9 114 chr3L 11943504 intergenic Rpt4R +,CG5883 - chr3L 11943561 intergenic Rpt4R +,CG5883 - chr3L 11943618 intergenic CG5883 -,Rpt4R + chr3L_4_11940001 chr3L_11940001 RAL-810 1095 chr3L 11974334 11974367 chr3L 11974414 11974447 16 80 2.0 2.5 2.2 5.0 113 chr3L 11974334 intergenic not near genes chr3L 11974390 intergenic not near genes chr3L 11974447 intergenic CG14125 + chr3L_16_11970001 chr3L_11970001 RAL-810 1096 chr3L 12019324 12019349 chr3L 12019437 12019462 12 113 2.0 2.0 2.0 4.0 138 chr3L 12019324 intron rols - chr3L 12019393 intron rols - chr3L 12019462 intron rols - chr3L_12_12015001 chr3L_12015001 RAL-810 1097 chr3L 12034888 12034918 chr3L 12034965 12034995 7 77 5.5 1.0 3.2 1.7 107 chr3L 12034888 intron rols - chr3L 12034942 intron rols - chr3L 12034995 intron rols - chr3L_7_12030001 chr3L_12030001 RAL-810 1098 chr3L 12052717 12052737 chr3L 12052806 12052826 9 89 3.0 2.0 2.5 2.6 109 chr3L 12052717 intron rols - chr3L 12052772 intron rols - chr3L 12052826 intron rols - chr3L_9_12050001 chr3L_12050001 RAL-810 1099 chr3L 12075433 12075447 chr3L 12075519 12075536 6 88 3.5 0.0 1.8 2.1 103 chr3L 12075433 intron Sema-5c - chr3L 12075484 intron Sema-5c - chr3L 12075536 intron Sema-5c - chr3L_6_12075001 chr3L_12075001 RAL-810 1100 chr3L 12352127 12352156 chr3L 12352228 12352257 5 100 2.0 3.5 2.8 1.3 130 chr3L 12352127 intergenic not near genes chr3L 12352192 intergenic not near genes chr3L 12352257 intergenic not near genes chr3L_5_12350001 chr3L_12350001 RAL-810 1101 chr3L 12353936 12353945 chr3L 12354022 12354034 7 88 1.0 6.0 3.5 1.6 98 chr3L 12353936 intergenic not near genes chr3L 12353985 intergenic not near genes chr3L 12354034 intergenic not near genes chr3L_7_12350001 chr3L_12350001 RAL-810 1102 chr3L 12460315 12460344 chr3L 12460392 12460421 7 77 0.0 5.0 2.5 2.0 106 chr3L 12460315 intergenic not near genes chr3L 12460368 intergenic not near genes chr3L 12460421 intergenic not near genes chr3L_7_12460001 chr3L_12460001 RAL-810 1103 chr3L 12467280 12467284 chr3L 12467361 12467368 4 83 0.0 3.5 1.8 1.4 88 chr3L 12467280 intron eyg - chr3L 12467324 intron eyg - chr3L 12467368 intron eyg - chr3L_4_12465001 chr3L_12465001 RAL-810 1104 chr3L 12488412 12488439 chr3L 12488539 12488566 10 127 1.5 2.0 1.8 3.6 154 chr3L 12488412 intron CG10660 - chr3L 12488489 intron CG10660 - chr3L 12488566 exon CG10660 - chr3L_10_12485001 chr3L_12485001 RAL-810 1105 chr3L 12555626 12555655 chr3L 12555720 12555734 11 92 0.5 2.5 1.5 4.4 108 chr3L 12555626 intron sowah - chr3L 12555680 intron sowah - chr3L 12555734 intron sowah - chr3L_11_12555001 chr3L_12555001 RAL-810 1106 chr3L 12578044 12578072 chr3L 12578132 12578160 6 88 1.5 1.0 1.2 2.7 116 chr3L 12578044 intergenic not near genes chr3L 12578102 intergenic not near genes chr3L 12578160 intergenic not near genes chr3L_6_12575001 chr3L_12575001 RAL-810 1107 chr3L 12587362 12587381 chr3L 12587445 12587464 9 83 2.5 0.5 1.5 3.6 102 chr3L 12587362 intron ara + chr3L 12587413 intron ara + chr3L 12587464 intron ara + chr3L_9_12585001 chr3L_12585001 RAL-810 1108 chr3L 12626153 12626163 chr3L 12626262 12626272 4 109 2.0 0.0 1.0 2.0 119 chr3L 12626153 intergenic not near genes chr3L 12626212 intergenic not near genes chr3L 12626272 intergenic not near genes chr3L_4_12625001 chr3L_12625001 RAL-810 1109 chr3L 12688118 12688139 chr3L 12688195 12688216 5 77 1.5 2.0 1.8 1.8 98 chr3L 12688118 intergenic not near genes chr3L 12688167 intergenic not near genes chr3L 12688216 intergenic not near genes chr3L_5_12685001 chr3L_12685001 RAL-810 1110 chr3L 12801978 12802011 chr3L 12802054 12802082 12 75 1.0 2.5 1.8 4.3 104 chr3L 12801978 intron Atg1 - chr3L 12802030 intron Atg1 - chr3L 12802082 intron Atg1 - chr3L_12_12800001 chr3L_12800001 RAL-810 1111 chr3L 12833160 12833194 chr3L 12833518 12833533 9 356 1.5 3.0 2.2 2.8 373 chr3L 12833160 intron CG10960 - chr3L 12833346 intron CG10960 - chr3L 12833533 intron CG10960 - chr3L_9_12830001 chr3L_12830001 RAL-810 1112 chr3L 12868028 12868037 chr3L 12868114 12868120 4 85 5.5 0.5 3.0 1.0 92 chr3L 12868028 intergenic not near genes chr3L 12868074 intergenic not near genes chr3L 12868120 intergenic not near genes chr3L_4_12865001 chr3L_12865001 RAL-810 1113 chr3L 12874931 12874958 chr3L 12877223 12877250 jockey 9 2292 0.5 3.0 1.8 3.2 2319 chr3L 12874931 intergenic not near genes chr3L 12876090 intergenic not near genes chr3L 12877250 intergenic not near genes chr3L_9_12875001 chr3L_12875001 RAL-810 1114 chr3L 12894799 12894820 chr3L 12894877 12894898 7 78 6.0 3.5 4.8 1.2 99 chr3L 12894799 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894898 intergenic CG14118 + chr3L_7_12890001 chr3L_12890001 RAL-810 1115 chr3L 12919279 12919303 chr3L 12924749 12924776 Rt1c 6 5470 4.5 2.5 3.5 1.3 5497 chr3L 12919279 intergenic not near genes chr3L 12922028 intergenic not near genes chr3L 12924776 intergenic not near genes chr3L_6_12920001 chr3L_12920001 RAL-810 1116 chr3L 12957787 12957816 chr3L 12962269 12962298 copia 5 4482 4.0 2.5 3.2 1.2 4511 chr3L 12957787 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962298 intergenic not near genes chr3L_5_12960001 chr3L_12960001 RAL-810 1117 chr3L 12980521 12980547 chr3L 12980609 12980634 7 88 1.0 0.0 0.5 4.7 113 chr3L 12980521 intergenic not near genes chr3L 12980578 intergenic not near genes chr3L 12980634 intergenic not near genes chr3L_7_12980001 chr3L_12980001 RAL-810 1118 chr3L 13056455 13056733 chr3L 13056612 13056818 7 106 0.0 0.0 0.0 7.0 363 chr3L 13056455 intergenic not near genes chr3L 13056636 intergenic not near genes chr3L 13056818 intergenic not near genes chr3L_7_13055001 chr3L_13055001 RAL-810 1119 chr3L 13073806 13073829 chr3L 13073909 13073932 8 103 4.0 3.0 3.5 1.8 126 chr3L 13073806 intergenic not near genes chr3L 13073869 intergenic not near genes chr3L 13073932 intergenic not near genes chr3L_8_13070001 chr3L_13070001 RAL-810 1120 chr3L 13074386 13074417 chr3L 13074480 13074511 10 93 2.0 1.0 1.5 4.0 125 chr3L 13074386 intergenic not near genes chr3L 13074448 intergenic not near genes chr3L 13074511 intergenic not near genes chr3L_10_13070001 chr3L_13070001 RAL-810 1121 chr3L 13085074 13085082 chr3L 13085153 13085161 4 79 1.0 6.0 3.5 0.9 87 chr3L 13085074 intergenic not near genes chr3L 13085118 intergenic not near genes chr3L 13085161 intergenic not near genes chr3L_4_13085001 chr3L_13085001 RAL-810 1122 chr3L 13142149 13142172 chr3L 13142262 13142285 5 113 2.5 4.0 3.2 1.2 136 chr3L 13142149 intergenic not near genes chr3L 13142217 intergenic not near genes chr3L 13142285 intergenic not near genes chr3L_5_13140001 chr3L_13140001 RAL-810 1123 chr3L 13144116 13144150 chr3L 13144193 13144227 9 76 2.5 3.5 3.0 2.2 111 chr3L 13144116 intergenic not near genes chr3L 13144172 intergenic not near genes chr3L 13144227 intergenic not near genes chr3L_9_13140001 chr3L_13140001 RAL-810 1124 chr3L 10972760 10972761 chr3L 13218193 13218194 4 2245432 1.0 12.0 6.5 0.5 2245434 chr3L 10972760 intron CG14147 + chr3L 12095477 intergenic not near genes chr3L 13218194 intergenic CR45098 - chr3L_4_12095001 chr3L_12095001 RAL-810 1125 chr3L 13223219 13223243 chr3L 13223296 13223320 4 77 0.5 5.0 2.8 1.1 101 chr3L 13223219 intergenic not near genes chr3L 13223270 intergenic not near genes chr3L 13223320 intergenic not near genes chr3L_4_13220001 chr3L_13220001 RAL-810 1126 chr3L 13301258 13301275 chr3L 13301340 13301357 4 82 0.0 0.0 0.0 4.0 99 chr3L 13301258 intergenic SP + chr3L 13301308 intergenic SP + chr3L 13301357 intergenic SP + chr3L_4_13300001 chr3L_13300001 RAL-810 1127 chr3L 13311791 13311820 chr3L 13311869 13311898 9 78 1.5 3.5 2.5 2.6 107 chr3L 13311791 intergenic not near genes chr3L 13311844 intergenic not near genes chr3L 13311898 intergenic not near genes chr3L_9_13310001 chr3L_13310001 RAL-810 1128 chr3L 13400525 13400546 chr3L 13400601 13400621 6 76 1.5 2.0 1.8 2.1 96 chr3L 13400525 intron sens - chr3L 13400573 intron sens - chr3L 13400621 intron sens - chr3L_6_13400001 chr3L_13400001 RAL-810 1129 chr3L 13525154 13525181 chr3L 13532950 13532977 roo 10 7793 3.0 7.0 5.0 1.7 7823 chr3L 13525154 intergenic not near genes chr3L 13529066 intergenic not near genes chr3L 13532977 intergenic not near genes chr3L_10_13525001 chr3L_13525001 RAL-810 1130 chr3L 13582216 13582232 chr3L 13582303 13582310 4 86 2.5 2.5 2.5 1.1 94 chr3L 13582216 intron bru-3 - chr3L 13582263 intron bru-3 - chr3L 13582310 intron bru-3 - chr3L_4_13580001 chr3L_13580001 RAL-810 1131 chr3L 13626689 13626713 chr3L 13626773 13626795 9 84 1.0 2.5 1.8 3.2 106 chr3L 13626689 intron bru-3 - chr3L 13626742 intron bru-3 - chr3L 13626795 intron bru-3 - chr3L_9_13625001 chr3L_13625001 RAL-810 1132 chr3L 13629527 13629548 chr3L 13629638 13629657 8 110 1.5 2.0 1.8 2.9 130 chr3L 13629527 intron bru-3 - chr3L 13629592 intron bru-3 - chr3L 13629657 intron bru-3 - chr3L_8_13625001 chr3L_13625001 RAL-810 1133 chr3L 13633422 13633443 chr3L 13633771 13633797 6 353 1.5 2.5 2.0 2.0 375 chr3L 13633422 intron bru-3 - chr3L 13633610 intron bru-3 - chr3L 13633797 intron bru-3 - chr3L_6_13630001 chr3L_13630001 RAL-810 1134 chr3L 13677529 13677556 chr3L 13677606 13677633 7 77 1.5 2.5 2.0 2.3 104 chr3L 13677529 intron bru-3 - chr3L 13677581 intron bru-3 - chr3L 13677633 intron bru-3 - chr3L_7_13675001 chr3L_13675001 RAL-810 1135 chr3L 13722445 13722468 chr3L 13722523 13722545 6 78 2.0 2.0 2.0 2.0 100 chr3L 13722445 intron bru-3 - chr3L 13722495 intron bru-3 - chr3L 13722545 intron bru-3 - chr3L_6_13720001 chr3L_13720001 RAL-810 1136 chr3L 13755921 13755925 chr3L 13756008 13756012 4 87 1.0 2.0 1.5 1.6 91 chr3L 13755921 intron bru-3 - chr3L 13755966 intron bru-3 - chr3L 13756012 intron bru-3 - chr3L_4_13755001 chr3L_13755001 RAL-810 1137 chr3L 13804551 13804576 chr3L 13822837 13822862 roo 11 18285 2.5 3.0 2.8 2.9 18311 chr3L 13804551 intergenic not near genes chr3L 13813706 intergenic not near genes chr3L 13822862 intergenic not near genes chr3L_11_13810001 chr3L_13810001 RAL-810 1138 chr3L 13838943 13838961 chr3L 13839162 13839180 6 219 3.5 4.5 4.0 1.2 237 chr3L 13838943 intergenic not near genes chr3L 13839062 intergenic not near genes chr3L 13839180 intergenic not near genes chr3L_6_13835001 chr3L_13835001 RAL-810 1139 chr3L 13994012 13994015 chr3L 13994092 13994095 5 80 1.5 1.5 1.5 2.0 83 chr3L 13994012 intergenic 26-29-p + chr3L 13994054 intergenic 26-29-p + chr3L 13994095 intergenic 26-29-p + chr3L_5_13990001 chr3L_13990001 RAL-810 1140 chr3L 14036682 14036703 chr3L 14036774 14036796 10 92 3.5 4.0 3.8 2.1 114 chr3L 14036682 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036739 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036796 3` UTR pncr014:3L - chr3L_10_14035001 chr3L_14035001 RAL-810 1141 chr3L 14061665 14061672 chr3L 14061754 14061761 4 89 4.5 0.0 2.2 1.2 96 chr3L 14061665 intron CG32138 + chr3L 14061713 intron CG32138 + chr3L 14061761 intron CG32138 + chr3L_4_14060001 chr3L_14060001 RAL-810 1142 chr3L 14118954 14118969 chr3L 14119044 14119062 6 92 4.0 3.0 3.5 1.3 108 chr3L 14118954 intron Sox21b - chr3L 14119008 intron Sox21b - chr3L 14119062 intron Sox21b - chr3L_6_14115001 chr3L_14115001 RAL-810 1143 chr3L 14144135 14144147 chr3L 14144213 14144225 5 78 6.5 1.5 4.0 1.0 90 chr3L 14144135 intergenic not near genes chr3L 14144180 intergenic not near genes chr3L 14144225 intergenic not near genes chr3L_5_14140001 chr3L_14140001 RAL-810 1144 chr3L 14194724 14194742 chr3L 14194800 14194818 7 76 2.0 2.0 2.0 2.3 94 chr3L 14194724 intron nuf + chr3L 14194771 intron nuf + chr3L 14194818 intron nuf + chr3L_7_14190001 chr3L_14190001 RAL-810 1145 chr3L 14196414 14196445 chr3L 14196499 14196530 21 85 2.0 3.5 2.8 5.5 116 chr3L 14196414 intron nuf + chr3L 14196472 intron nuf + chr3L 14196530 intron nuf + chr3L_21_14195001 chr3L_14195001 RAL-810 1146 chr3L 14234472 14234487 chr3L 14234557 14234571 5 85 3.0 0.0 1.5 2.0 99 chr3L 14234472 exon CG7924 + chr3L 14234522 3` UTR CG7924 + chr3L 14234571 3` UTR CG7924 + chr3L_5_14230001 chr3L_14230001 RAL-810 1147 chr3L 14239998 14240006 chr3L 14240091 14240103 9 96 0.0 2.0 1.0 4.5 105 chr3L 14239998 intergenic not near genes chr3L 14240050 intergenic not near genes chr3L 14240103 intergenic not near genes chr3L_9_14240001 chr3L_14240001 RAL-810 1148 chr3L 14245567 14245591 chr3L 14245661 14245682 1360 4 93 3.0 1.5 2.2 1.2 115 chr3L 14245567 3` UTR CR44561 - chr3L 14245624 3` UTR CR44561 - chr3L 14245682 3` UTR CR44561 - chr3L_4_14245001 chr3L_14245001 RAL-810 1149 chr3L 14267369 14267399 chr3L 14271809 14271839 F-element 8 4439 3.0 4.5 3.8 1.7 4470 chr3L 14267369 intergenic not near genes chr3L 14269604 intergenic not near genes chr3L 14271839 intergenic not near genes chr3L_8_14265001 chr3L_14265001 RAL-810 1150 chr3L 14295988 14296002 chr3L 14296467 14296487 roo 7 485 5.5 4.5 5.0 1.2 499 chr3L 14295988 intron fz + chr3L 14296238 intron fz + chr3L 14296487 intron fz + chr3L_7_14295001 chr3L_14295001 RAL-810 1151 chr3L 14335887 14335903 chr3L 14337333 14337349 6 1446 10.0 16.5 13.2 0.4 1462 chr3L 14335887 intron fz + chr3L 14336618 intron fz + chr3L 14337349 intron fz + chr3L_6_14335001 chr3L_14335001 RAL-810 1152 chr3L 14399180 14399192 chr3L 14399269 14399281 7 88 3.0 0.0 1.5 2.8 101 chr3L 14399180 intergenic not near genes chr3L 14399230 intergenic not near genes chr3L 14399281 intergenic not near genes chr3L_7_14395001 chr3L_14395001 RAL-810 1153 chr3L 14411864 14411894 chr3L 14411943 14411973 9 79 3.5 2.0 2.8 2.4 109 chr3L 14411864 intron CG3919 + chr3L 14411918 intron CG3919 + chr3L 14411973 intron CG3919 + chr3L_9_14410001 chr3L_14410001 RAL-810 1154 chr3L 14455365 14455373 chr3L 14455445 14455454 4 81 6.0 0.0 3.0 1.0 89 chr3L 14455365 intron bbg - chr3L 14455410 intron bbg - chr3L 14455454 intron bbg - chr3L_4_14455001 chr3L_14455001 RAL-810 1155 chr3L 14468463 14468478 chr3L 14473669 14473684 copia 6 5206 1.5 7.5 4.5 1.1 5221 chr3L 14468463 intron bbg - chr3L 14471074 intron bbg - chr3L 14473684 intron bbg - chr3L_6_14470001 chr3L_14470001 RAL-810 1156 chr3L 14522106 14522128 chr3L 14522204 14522227 6 99 3.5 2.5 3.0 1.5 121 chr3L 14522106 intron bbg - chr3L 14522166 intron bbg - chr3L 14522227 intron bbg - chr3L_6_14520001 chr3L_14520001 RAL-810 1157 chr3L 14585605 14585641 chr3L 14585683 14585719 6 77 0.0 4.5 2.2 1.9 114 chr3L 14585605 intron HGTX - chr3L 14585662 intron HGTX - chr3L 14585719 intron HGTX - chr3L_6_14585001 chr3L_14585001 RAL-810 1158 chr3L 14654382 14654396 chr3L 14654462 14654476 5 80 2.0 5.5 3.8 1.0 94 chr3L 14654382 intron dlp + chr3L 14654429 intron dlp + chr3L 14654476 intron dlp + chr3L_5_14650001 chr3L_14650001 RAL-810 1159 chr3L 14676050 14676064 chr3L 14676127 14676142 5 79 2.5 4.0 3.2 1.2 92 chr3L 14676050 intron,intron ome +,CG4914 - chr3L 14676096 intron,intron ome +,CG4914 - chr3L 14676142 intron,intron ome +,CG4914 - chr3L_5_14675001 chr3L_14675001 RAL-810 1160 chr3L 14741141 14741165 chr3L 14741219 14741243 7 78 4.0 4.5 4.2 1.3 102 chr3L 14741141 intron ome + chr3L 14741192 intron ome + chr3L 14741243 intron ome + chr3L_7_14740001 chr3L_14740001 RAL-810 1161 chr3L 14834124 14834145 chr3L 14834233 14834254 5 107 3.5 1.5 2.5 1.4 130 chr3L 14834124 intron CG17839 + chr3L 14834189 intron CG17839 + chr3L 14834254 intron CG17839 + chr3L_5_14830001 chr3L_14830001 RAL-810 1162 chr3L 14838620 14838653 chr3L 14838700 14838733 8 80 1.0 1.0 1.0 4.0 113 chr3L 14838620 intron CG17839 + chr3L 14838676 intron CG17839 + chr3L 14838733 intron CG17839 + chr3L_8_14835001 chr3L_14835001 RAL-810 1163 chr3L 14844263 14844290 chr3L 14844354 14844381 12 91 0.5 4.5 2.5 3.4 118 chr3L 14844263 intron CG17839 + chr3L 14844322 intron CG17839 + chr3L 14844381 intron CG17839 + chr3L_12_14840001 chr3L_14840001 RAL-810 1164 chr3L 14912187 14912210 chr3L 14912269 14912292 12 82 2.0 4.0 3.0 3.0 105 chr3L 14912187 intron DCX-EMAP + chr3L 14912240 intron DCX-EMAP + chr3L 14912292 intron DCX-EMAP + chr3L_12_14910001 chr3L_14910001 RAL-810 1165 chr3L 14917662 14917687 chr3L 14917745 14917770 12 83 6.0 5.0 5.5 1.8 108 chr3L 14917662 intron DCX-EMAP + chr3L 14917716 intron DCX-EMAP + chr3L 14917770 intron DCX-EMAP + chr3L_12_14915001 chr3L_14915001 RAL-810 1166 chr3L 14948653 14948675 chr3L 14948731 14948753 6 78 1.5 2.0 1.8 2.1 100 chr3L 14948653 intergenic not near genes chr3L 14948703 intergenic not near genes chr3L 14948753 intergenic not near genes chr3L_6_14945001 chr3L_14945001 RAL-810 1167 chr3L 14973632 14973664 chr3L 14973711 14973743 10 78 2.0 1.0 1.5 4.0 111 chr3L 14973632 intergenic Brd + chr3L 14973688 intergenic Brd + chr3L 14973743 intergenic not near genes chr3L_10_14970001 chr3L_14970001 RAL-810 1168 chr3L 15048117 15048145 chr3L 15048481 15048509 11 364 19.5 17.5 18.5 0.6 392 chr3L 15048117 intron Sytbeta - chr3L 15048313 intron Sytbeta - chr3L 15048509 intron Sytbeta - chr3L_11_15045001 chr3L_15045001 RAL-810 1169 chr3L 15085066 15085083 chr3L 15086232 15086249 1360 4 1166 1.0 7.0 4.0 0.8 1183 chr3L 15085066 intron cp309 - chr3L 15085658 intron cp309 - chr3L 15086249 intron cp309 - chr3L_4_15085001 chr3L_15085001 RAL-810 1170 chr3L 15086694 15086722 chr3L 15086944 15086971 8 250 2.0 3.0 2.5 2.3 277 chr3L 15086694 intron cp309 - chr3L 15086832 intron cp309 - chr3L 15086971 intron cp309 - chr3L_8_15085001 chr3L_15085001 RAL-810 1171 chr3L 15193698 15193726 chr3L 15193865 15193895 12 169 2.5 3.0 2.8 3.2 197 chr3L 15193698 intergenic not near genes chr3L 15193796 intergenic not near genes chr3L 15193895 intergenic not near genes chr3L_12_15190001 chr3L_15190001 RAL-810 1172 chr3L 15261885 15261916 chr3L 15261986 15262013 8 99 2.0 1.0 1.5 3.2 128 chr3L 15261885 intergenic not near genes chr3L 15261949 intergenic not near genes chr3L 15262013 intergenic not near genes chr3L_8_15260001 chr3L_15260001 RAL-810 1173 chr3L 15273340 15273360 chr3L 15273486 15273506 6 146 0.0 0.5 0.2 5.0 166 chr3L 15273340 intergenic not near genes chr3L 15273423 intergenic not near genes chr3L 15273506 intergenic not near genes chr3L_6_15270001 chr3L_15270001 RAL-810 1174 chr3L 15284565 15284597 chr3L 15284644 15284676 6 79 5.0 0.5 2.8 1.6 111 chr3L 15284565 intergenic not near genes chr3L 15284620 intergenic not near genes chr3L 15284676 intergenic not near genes chr3L_6_15280001 chr3L_15280001 RAL-810 1175 chr3L 15295775 15295799 chr3L 15298618 15298642 gypsy5 10 2843 3.0 2.5 2.8 2.6 2867 chr3L 15295775 intergenic not near genes chr3L 15297208 intergenic not near genes chr3L 15298642 intergenic Best4 + chr3L_10_15295001 chr3L_15295001 RAL-810 1176 chr3L 15315674 15315700 chr3L 15316851 15316877 7 1177 1.0 2.0 1.5 2.8 1203 chr3L 15315674 intergenic not near genes chr3L 15316276 intergenic not near genes chr3L 15316877 intergenic not near genes chr3L_7_15315001 chr3L_15315001 RAL-810 1177 chr3L 15333225 15333250 chr3L 15333309 15333334 8 84 5.0 3.5 4.2 1.5 109 chr3L 15333225 intergenic CR43247 + chr3L 15333280 intergenic CR43247 + chr3L 15333334 intergenic CR43247 + chr3L_8_15330001 chr3L_15330001 RAL-810 1178 chr3L 15406019 15406049 chr3L 15406101 15406132 4 82 1.5 2.5 2.0 1.3 113 chr3L 15406019 intergenic not near genes chr3L 15406076 intergenic not near genes chr3L 15406132 intergenic not near genes chr3L_4_15405001 chr3L_15405001 RAL-810 1179 chr3L 15423760 15423784 chr3L 15426604 15426628 opus 9 2844 3.0 3.0 3.0 2.2 2868 chr3L 15423760 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426628 intergenic not near genes chr3L_9_15425001 chr3L_15425001 RAL-810 1180 chr3L 15466042 15466130 chr3L 15466124 15466226 8 92 0.0 0.0 0.0 8.0 184 chr3L 15466042 intergenic not near genes chr3L 15466134 intergenic not near genes chr3L 15466226 intergenic not near genes chr3L_8_15465001 chr3L_15465001 RAL-810 1181 chr3L 15482611 15482625 chr3L 15482692 15482706 5 81 3.0 1.0 2.0 1.7 95 chr3L 15482611 intergenic not near genes chr3L 15482658 intergenic not near genes chr3L 15482706 intergenic not near genes chr3L_5_15480001 chr3L_15480001 RAL-810 1182 chr3L 15658472 15658507 chr3L 15658561 15658596 13 89 0.5 2.0 1.2 5.9 124 chr3L 15658472 intergenic Eig71Eg +,Eig71Eh - chr3L 15658534 intergenic Eig71Eg +,Eig71Eh - chr3L 15658596 intergenic Eig71Eh -,Eig71Eg + chr3L_13_15655001 chr3L_15655001 RAL-810 1183 chr3L 15691415 15691441 chr3L 15691496 15691523 8 82 2.0 2.5 2.2 2.5 108 chr3L 15691415 intron CG34451 - chr3L 15691469 intron CG34451 - chr3L 15691523 intron CG34451 - chr3L_8_15690001 chr3L_15690001 RAL-810 1184 chr3L 15756880 15756909 chr3L 15756962 15756992 6 83 2.5 0.0 1.2 2.7 112 chr3L 15756880 intergenic not near genes chr3L 15756936 intergenic not near genes chr3L 15756992 intergenic not near genes chr3L_6_15755001 chr3L_15755001 RAL-810 1185 chr3L 15831780 15831812 chr3L 15831856 15831888 14 76 4.5 2.0 3.2 3.3 108 chr3L 15831780 3` UTR dbo + chr3L 15831834 3` UTR dbo + chr3L 15831888 3` UTR dbo + chr3L_14_15830001 chr3L_15830001 RAL-810 1186 chr3L 15833802 15833826 chr3L 15834041 15834065 7 239 18.5 21.0 19.8 0.3 263 chr3L 15833802 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833934 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834065 3` UTR CG18081 - chr3L_7_15830001 chr3L_15830001 RAL-810 1187 chr3L 15981680 15981686 chr3L 15981766 15981772 5 86 6.5 3.0 4.8 0.9 92 chr3L 15981680 intron,3` UTR brm -,CG17027 + chr3L 15981726 intron,3` UTR brm -,CG17027 + chr3L 15981772 intron,3` UTR brm -,CG17027 + chr3L_5_15980001 chr3L_15980001 RAL-810 1188 chr3L 16159270 16159295 chr3L 16159347 16159372 10 77 5.5 7.0 6.2 1.4 102 chr3L 16159270 intron CG5151 - chr3L 16159321 intron CG5151 - chr3L 16159372 intron CG5151 - chr3L_10_16155001 chr3L_16155001 RAL-810 1189 chr3L 16162595 16162628 chr3L 16162679 16162712 10 84 2.5 2.0 2.2 3.1 117 chr3L 16162595 intron CG5151 - chr3L 16162654 intron CG5151 - chr3L 16162712 intron CG5151 - chr3L_10_16160001 chr3L_16160001 RAL-810 1190 chr3L 16184085 16184116 chr3L 16188929 16188960 X-element 9 4844 2.0 1.0 1.5 3.6 4875 chr3L 16184085 intergenic not near genes chr3L 16186522 intergenic not near genes chr3L 16188960 intergenic not near genes chr3L_9_16185001 chr3L_16185001 RAL-810 1191 chr3L 16322830 16322856 chr3L 16322914 16322946 7 89 3.0 4.0 3.5 1.6 116 chr3L 16322830 intergenic not near genes chr3L 16322888 intergenic not near genes chr3L 16322946 intergenic not near genes chr3L_7_16320001 chr3L_16320001 RAL-810 1192 chr3L 16450039 16450053 chr3L 16450124 16450138 5 85 2.0 6.5 4.2 1.0 99 chr3L 16450039 intron,intron CG33158 +,dsx-c73A - chr3L 16450088 intron,intron CG33158 +,dsx-c73A - chr3L 16450138 intron,intron CG33158 +,dsx-c73A - chr3L_5_16450001 chr3L_16450001 RAL-810 1193 chr3L 16457533 16457541 chr3L 16457627 16457636 4 95 2.0 4.0 3.0 1.0 103 chr3L 16457533 intron CG33158 + chr3L 16457584 intron CG33158 + chr3L 16457636 intron CG33158 + chr3L_4_16455001 chr3L_16455001 RAL-810 1194 chr3L 16493977 16494003 chr3L 16494493 16494520 jockey 8 517 5.5 2.0 3.8 1.7 543 chr3L 16493977 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494248 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494520 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_8_16490001 chr3L_16490001 RAL-810 1195 chr3L 16509397 16509419 chr3L 16509548 16509570 6 151 1.5 4.0 2.8 1.6 173 chr3L 16509397 intron CG43373 - chr3L 16509484 intron CG43373 - chr3L 16509570 intron CG43373 - chr3L_6_16505001 chr3L_16505001 RAL-810 1196 chr3L 16515333 16515342 chr3L 16515416 16515426 4 83 0.5 1.0 0.8 2.2 93 chr3L 16515333 intron CG43373 - chr3L 16515380 intron CG43373 - chr3L 16515426 intron CG43373 - chr3L_4_16515001 chr3L_16515001 RAL-810 1197 chr3L 16610691 16610717 chr3L 16610776 16610802 9 84 1.5 3.5 2.5 2.6 111 chr3L 16610691 3` UTR Su(P) - chr3L 16610746 exon Su(P) - chr3L 16610802 exon Su(P) - chr3L_9_16610001 chr3L_16610001 RAL-810 1198 chr3L 16616518 16616543 chr3L 16621846 16621871 297 9 5327 2.5 3.0 2.8 2.4 5353 chr3L 16616518 3` UTR Abl - chr3L 16619194 3` UTR Abl - chr3L 16621871 3` UTR Abl - chr3L_9_16615001 chr3L_16615001 RAL-810 1199 chr3L 16643653 16643672 chr3L 16643735 16643754 5 82 3.5 3.5 3.5 1.1 101 chr3L 16643653 intron Abl - chr3L 16643704 intron Abl - chr3L 16643754 intron Abl - chr3L_5_16640001 chr3L_16640001 RAL-810 1200 chr3L 16684021 16684049 chr3L 16689242 16689270 copia 4 5221 7.5 1.5 4.5 0.7 5249 chr3L 16684021 intron,intron Lasp -,CG43954 - chr3L 16686646 intron,intron Lasp -,CG43954 - chr3L 16689270 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_4_16685001 chr3L_16685001 RAL-810 1201 chr3L 16708519 16708549 chr3L 16708633 16708663 8 114 0.5 0.5 0.5 5.3 144 chr3L 16708519 intron,intron Lasp -,CG43954 - chr3L 16708591 intron,intron Lasp -,CG43954 - chr3L 16708663 intron,intron Lasp -,CG43954 - chr3L_8_16705001 chr3L_16705001 RAL-810 1202 chr3L 16754428 16754460 chr3L 16754507 16754539 9 79 1.0 3.0 2.0 3.0 111 chr3L 16754428 intergenic not near genes chr3L 16754484 intergenic not near genes chr3L 16754539 intergenic not near genes chr3L_9_16750001 chr3L_16750001 RAL-810 1203 chr3L 16757641 16757663 chr3L 16757731 16757753 14 90 2.5 2.5 2.5 4.0 112 chr3L 16757641 intergenic not near genes chr3L 16757697 intergenic not near genes chr3L 16757753 intergenic not near genes chr3L_14_16755001 chr3L_16755001 RAL-810 1204 chr3L 16808040 16808072 chr3L 16808116 16808148 6 76 4.5 0.0 2.2 1.9 108 chr3L 16808040 intron nudC + chr3L 16808094 intron nudC + chr3L 16808148 intron nudC + chr3L_6_16805001 chr3L_16805001 RAL-810 1205 chr3L 16845031 16845044 chr3L 16845137 16845157 6 112 4.5 5.0 4.8 1.0 126 chr3L 16845031 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845094 intergenic CG9669 -,CG9715 + chr3L 16845157 intergenic CG9669 -,CG9715 + chr3L_6_16845001 chr3L_16845001 RAL-810 1206 chr3L 16893066 16893094 chr3L 16893381 16893409 5 315 2.0 1.5 1.8 1.8 343 chr3L 16893066 intron Lmpt + chr3L 16893238 intron Lmpt + chr3L 16893409 intron Lmpt + chr3L_5_16890001 chr3L_16890001 RAL-810 1207 chr3L 16941403 16941431 chr3L 16941504 16941532 5 101 2.0 0.5 1.2 2.3 129 chr3L 16941403 intron Cpr73D - chr3L 16941468 intron Cpr73D - chr3L 16941532 intron Cpr73D - chr3L_5_16940001 chr3L_16940001 RAL-810 1208 chr3L 16945729 16945761 chr3L 16954882 16954913 roo 10 9145 1.0 2.5 1.8 3.6 9184 chr3L 16945729 exon Obp73a + chr3L 16950321 intergenic not near genes chr3L 16954913 5` UTR Nc73EF + chr3L_10_16950001 chr3L_16950001 RAL-810 1209 chr3L 17027169 17027184 chr3L 17027261 17027275 5 92 1.5 4.5 3.0 1.2 106 chr3L 17027169 intergenic Fit2 +,CG7730 + chr3L 17027222 intergenic Fit2 +,CG7730 + chr3L 17027275 intergenic Fit2 +,CG7730 + chr3L_5_17025001 chr3L_17025001 RAL-810 1210 chr3L 17034933 17034969 chr3L 17035121 17035157 G2 14 188 3.0 1.0 2.0 4.7 224 chr3L 17034933 intergenic not near genes chr3L 17035045 intergenic not near genes chr3L 17035157 intergenic not near genes chr3L_14_17035001 chr3L_17035001 RAL-810 1211 chr3L 17048485 17048515 chr3L 17048584 17048617 10 102 1.5 4.5 3.0 2.5 132 chr3L 17048485 intergenic TpnC73F + chr3L 17048551 intergenic TpnC73F + chr3L 17048617 intergenic TpnC73F + chr3L_10_17045001 chr3L_17045001 RAL-810 1212 chr3L 17067745 17067770 chr3L 17067877 17067901 7 131 3.5 0.5 2.0 2.3 156 chr3L 17067745 intron Rbp6 - chr3L 17067823 intron Rbp6 - chr3L 17067901 intron Rbp6 - chr3L_7_17065001 chr3L_17065001 RAL-810 1213 chr3L 17085010 17085031 chr3L 17094159 17094180 roo 8 9149 2.5 7.5 5.0 1.3 9170 chr3L 17085010 intron Rbp6 - chr3L 17089595 intron Rbp6 - chr3L 17094180 intron Rbp6 - chr3L_8_17085001 chr3L_17085001 RAL-810 1214 chr3L 17099164 17099185 chr3L 17099285 17099306 10 121 3.0 1.0 2.0 3.3 142 chr3L 17099164 intron Rbp6 - chr3L 17099235 intron Rbp6 - chr3L 17099306 intron Rbp6 - chr3L_10_17095001 chr3L_17095001 RAL-810 1215 chr3L 17149168 17149182 chr3L 17149249 17149263 7 81 3.0 0.0 1.5 2.8 95 chr3L 17149168 intron Rbp6 - chr3L 17149216 intron Rbp6 - chr3L 17149263 intron Rbp6 - chr3L_7_17145001 chr3L_17145001 RAL-810 1216 chr3L 17164375 17164397 chr3L 17164516 17164538 4 141 0.5 0.0 0.2 3.3 163 chr3L 17164375 intron Rbp6 - chr3L 17164456 intron Rbp6 - chr3L 17164538 intron Rbp6 - chr3L_4_17160001 chr3L_17160001 RAL-810 1217 chr3L 17167976 17168003 chr3L 17168081 17168105 7 103 2.5 4.5 3.5 1.6 129 chr3L 17167976 intron Rbp6 - chr3L 17168040 intron Rbp6 - chr3L 17168105 intron Rbp6 - chr3L_7_17165001 chr3L_17165001 RAL-810 1218 chr3L 17265310 17265330 chr3L 17265388 17265409 8 78 3.5 2.5 3.0 2.0 99 chr3L 17265310 intergenic CG13723 + chr3L 17265360 intergenic CG13723 + chr3L 17265409 intergenic CG13723 + chr3L_8_17265001 chr3L_17265001 RAL-810 1219 chr3L 17295218 17295247 chr3L 17295294 17295323 7 76 3.5 2.5 3.0 1.8 105 chr3L 17295218 intergenic not near genes chr3L 17295270 intergenic not near genes chr3L 17295323 intergenic not near genes chr3L_7_17295001 chr3L_17295001 RAL-810 1220 chr3L 17332886 17332905 chr3L 17332968 17332987 5 82 0.5 5.0 2.8 1.3 101 chr3L 17332886 intergenic not near genes chr3L 17332936 intergenic not near genes chr3L 17332987 intergenic not near genes chr3L_5_17330001 chr3L_17330001 RAL-810 1221 chr3L 17446552 17446576 chr3L 17446662 17446690 6 115 1.5 2.0 1.8 2.1 138 chr3L 17446552 intron CG18265 + chr3L 17446621 intron CG18265 + chr3L 17446690 intron CG18265 + chr3L_6_17445001 chr3L_17445001 RAL-810 1222 chr3L 17474908 17474939 chr3L 17474985 17475015 11 77 2.5 3.5 3.0 2.8 107 chr3L 17474908 intergenic CG7580 +,CG7589 + chr3L 17474962 intergenic CG7580 +,CG7589 + chr3L 17475015 intergenic CG7580 +,CG7589 + chr3L_11_17470001 chr3L_17470001 RAL-810 1223 chr3L 17510749 17510766 chr3L 17510830 17510850 5 83 1.0 5.5 3.2 1.2 101 chr3L 17510749 exon Oatp74D + chr3L 17510800 intron Oatp74D + chr3L 17510850 intron Oatp74D + chr3L_5_17510001 chr3L_17510001 RAL-810 1224 chr3L 17516987 17517002 chr3L 17524545 17524560 412 6 7558 6.5 4.0 5.2 1.0 7573 chr3L 17516987 intron CG7564 + chr3L 17520774 intron CG7564 + chr3L 17524560 3` UTR CG7564 + chr3L_6_17520001 chr3L_17520001 RAL-810 1225 chr3L 17580593 17580603 chr3L 17580769 17580779 7 176 3.5 0.0 1.8 2.5 186 chr3L 17580593 intron Eip74EF - chr3L 17580686 intron Eip74EF - chr3L 17580779 intron Eip74EF - chr3L_7_17580001 chr3L_17580001 RAL-810 1226 chr3L 17585315 17585348 chr3L 17585653 17585674 6 329 24.5 25.0 24.8 0.2 359 chr3L 17585315 intron Eip74EF - chr3L 17585494 intron Eip74EF - chr3L 17585674 intron Eip74EF - chr3L_6_17585001 chr3L_17585001 RAL-810 1227 chr3L 17592785 17592815 chr3L 17592876 17592906 13 91 2.0 5.0 3.5 2.9 121 chr3L 17592785 intron Eip74EF - chr3L 17592846 intron Eip74EF - chr3L 17592906 intron Eip74EF - chr3L_13_17590001 chr3L_17590001 RAL-810 1228 chr3L 17632685 17632704 chr3L 17632769 17632788 6 84 6.5 1.0 3.8 1.2 103 chr3L 17632685 intergenic CR44567 -,CR44566 + chr3L 17632736 intergenic CR44567 -,CR44566 + chr3L 17632788 intergenic CR44567 - chr3L_6_17630001 chr3L_17630001 RAL-810 1229 chr3L 17713191 17713213 chr3L 17713350 17713373 5 159 3.5 3.5 3.5 1.1 182 chr3L 17713191 intron Ccn + chr3L 17713282 intron Ccn + chr3L 17713373 intron Ccn + chr3L_5_17710001 chr3L_17710001 RAL-810 1230 chr3L 17773209 17773236 chr3L 17773306 17773333 5 97 3.5 3.5 3.5 1.1 124 chr3L 17773209 intergenic not near genes chr3L 17773271 intergenic not near genes chr3L 17773333 intergenic not near genes chr3L_5_17770001 chr3L_17770001 RAL-810 1231 chr3L 17782356 17782372 chr3L 17782632 17782648 7 276 4.0 2.0 3.0 1.8 292 chr3L 17782356 intergenic not near genes chr3L 17782502 intergenic not near genes chr3L 17782648 intergenic not near genes chr3L_7_17780001 chr3L_17780001 RAL-810 1232 chr3L 17789847 17789864 chr3L 17789920 17789940 7 76 1.5 2.5 2.0 2.3 93 chr3L 17789847 intergenic not near genes chr3L 17789894 intergenic not near genes chr3L 17789940 intergenic not near genes chr3L_7_17785001 chr3L_17785001 RAL-810 1233 chr3L 17790197 17790226 chr3L 17790308 17790343 5 115 1.5 3.0 2.2 1.6 146 chr3L 17790197 intergenic not near genes chr3L 17790270 intergenic not near genes chr3L 17790343 intergenic not near genes chr3L_5_17790001 chr3L_17790001 RAL-810 1234 chr3L 17799573 17799587 chr3L 17799653 17799668 5 81 1.0 4.5 2.8 1.3 95 chr3L 17799573 intron NUCB1 - chr3L 17799620 intron NUCB1 - chr3L 17799668 intron NUCB1 - chr3L_5_17795001 chr3L_17795001 RAL-810 1235 chr3L 17799811 17799840 chr3L 17801598 17801627 S-element 14 1787 1.0 2.0 1.5 5.6 1816 chr3L 17799811 intron NUCB1 - chr3L 17800719 intron NUCB1 - chr3L 17801627 intron NUCB1 - chr3L_14_17800001 chr3L_17800001 RAL-810 1236 chr3L 17827287 17827316 chr3L 17827378 17827407 10 91 5.5 3.0 4.2 1.9 120 chr3L 17827287 intron Grd + chr3L 17827347 intron Grd + chr3L 17827407 intron Grd + chr3L_10_17825001 chr3L_17825001 RAL-810 1237 chr3L 17834331 17834352 chr3L 17834495 17834516 6 164 3.5 2.0 2.8 1.6 185 chr3L 17834331 intron Grd + chr3L 17834424 intron Grd + chr3L 17834516 intron Grd + chr3L_6_17830001 chr3L_17830001 RAL-810 1238 chr3L 17837630 17837650 chr3L 17837718 17837738 8 88 4.0 3.0 3.5 1.8 108 chr3L 17837630 exon Grd + chr3L 17837684 intron Grd + chr3L 17837738 intron Grd + chr3L_8_17835001 chr3L_17835001 RAL-810 1239 chr3L 17904846 17904860 chr3L 17905234 17905248 7 388 1.0 2.5 1.8 2.5 402 chr3L 17904846 intron Prestin - chr3L 17905047 intron Prestin - chr3L 17905248 intron Prestin - chr3L_7_17905001 chr3L_17905001 RAL-810 1240 chr3L 17918377 17918405 chr3L 17921180 17921208 opus 9 2803 2.5 6.0 4.2 1.7 2831 chr3L 17918377 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921208 intergenic not near genes chr3L_9_17915001 chr3L_17915001 RAL-810 1241 chr3L 18029966 18029983 chr3L 18030043 18030060 7 77 1.0 0.0 0.5 4.7 94 chr3L 18029966 intron Eip75B - chr3L 18030013 intron Eip75B - chr3L 18030060 intron Eip75B - chr3L_7_18030001 chr3L_18030001 RAL-810 1242 chr3L 18047706 18047741 chr3L 18056762 18056786 roo 8 9054 1.5 1.5 1.5 3.2 9080 chr3L 18047706 intron Eip75B - chr3L 18052246 intron Eip75B - chr3L 18056786 intron Eip75B - chr3L_8_18050001 chr3L_18050001 RAL-810 1243 chr3L 18064070 18064077 chr3L 18064156 18064164 4 86 2.5 5.0 3.8 0.8 94 chr3L 18064070 intron Eip75B - chr3L 18064117 intron Eip75B - chr3L 18064164 intron Eip75B - chr3L_4_18060001 chr3L_18060001 RAL-810 1244 chr3L 18163980 18164236 chr3L 18164182 18164403 10 195 2.5 2.5 2.5 2.9 423 chr3L 18163980 intergenic not near genes chr3L 18164192 intergenic not near genes chr3L 18164403 intergenic not near genes chr3L_10_18160001 chr3L_18160001 RAL-810 1245 chr3L 18198930 18198931 chr3L 24821492 24821494 8 6622563 15.5 12.0 13.8 0.5 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_8_21510001 chr3L_21510001 RAL-810 1246 chr3L 18221101 18221119 chr3L 18221182 18221200 4 79 0.0 0.0 0.0 4.0 99 chr3L 18221101 intergenic not near genes chr3L 18221150 intergenic not near genes chr3L 18221200 intergenic not near genes chr3L_4_18220001 chr3L_18220001 RAL-810 1247 chr3L 18223163 18223187 chr3L 18223246 18223270 7 83 2.0 0.0 1.0 3.5 107 chr3L 18223163 intergenic not near genes chr3L 18223216 intergenic not near genes chr3L 18223270 intergenic not near genes chr3L_7_18220001 chr3L_18220001 RAL-810 1248 chr3L 18226669 18226677 chr3L 18226759 18226767 5 90 0.0 5.5 2.8 1.3 98 chr3L 18226669 intergenic not near genes chr3L 18226718 intergenic not near genes chr3L 18226767 intergenic not near genes chr3L_5_18225001 chr3L_18225001 RAL-810 1249 chr3L 18248955 18248978 chr3L 18249053 18249076 5 98 0.5 2.0 1.2 2.3 121 chr3L 18248955 intergenic not near genes chr3L 18249016 intergenic not near genes chr3L 18249076 intergenic not near genes chr3L_5_18245001 chr3L_18245001 RAL-810 1250 chr3L 18283939 18283965 chr3L 18284015 18284042 6 77 1.0 2.0 1.5 2.4 103 chr3L 18283939 intergenic not near genes chr3L 18283990 intergenic not near genes chr3L 18284042 intergenic not near genes chr3L_6_18280001 chr3L_18280001 RAL-810 1251 chr3L 18301351 18301380 chr3L 18301440 18301469 8 89 0.0 2.5 1.2 3.6 118 chr3L 18301351 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301469 intergenic CG13700 - chr3L_8_18300001 chr3L_18300001 RAL-810 1252 chr3L 18321081 18321104 chr3L 18321164 18321190 7 86 0.5 2.0 1.2 3.2 109 chr3L 18321081 intergenic not near genes chr3L 18321136 intergenic not near genes chr3L 18321190 intergenic not near genes chr3L_7_18320001 chr3L_18320001 RAL-810 1253 chr3L 18406152 18406154 chr3L 18406228 18406230 4 76 1.5 7.5 4.5 0.7 78 chr3L 18406152 intergenic not near genes chr3L 18406191 intergenic not near genes chr3L 18406230 intergenic not near genes chr3L_4_18405001 chr3L_18405001 RAL-810 1254 chr3L 18408738 18408754 chr3L 18408824 18408840 4 86 3.0 1.0 2.0 1.3 102 chr3L 18408738 intergenic not near genes chr3L 18408789 intergenic not near genes chr3L 18408840 intergenic not near genes chr3L_4_18405001 chr3L_18405001 RAL-810 1255 chr3L 18430270 18430293 chr3L 18430345 18430370 8 77 3.0 3.0 3.0 2.0 100 chr3L 18430270 intergenic not near genes chr3L 18430320 intergenic not near genes chr3L 18430370 intergenic not near genes chr3L_8_18430001 chr3L_18430001 RAL-810 1256 chr3L 18436065 18436094 chr3L 18436161 18436192 7 98 2.5 2.5 2.5 2.0 127 chr3L 18436065 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436192 intergenic not near genes chr3L_7_18435001 chr3L_18435001 RAL-810 1257 chr3L 18456275 18456302 chr3L 18456363 18456390 7 88 3.5 2.0 2.8 1.8 115 chr3L 18456275 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456390 intergenic CR44670 - chr3L_7_18455001 chr3L_18455001 RAL-810 1258 chr3L 18465573 18465602 chr3L 18465682 18465706 11 108 5.5 4.5 5.0 1.8 133 chr3L 18465573 intergenic not near genes chr3L 18465640 intergenic not near genes chr3L 18465706 intergenic not near genes chr3L_11_18465001 chr3L_18465001 RAL-810 1259 chr3L 18485688 18485719 chr3L 18485774 18485806 8 87 2.5 2.5 2.5 2.3 118 chr3L 18485688 3` UTR AstC-R2 - chr3L 18485747 3` UTR AstC-R2 - chr3L 18485806 3` UTR AstC-R2 - chr3L_8_18485001 chr3L_18485001 RAL-810 1260 chr3L 18506133 18506163 chr3L 18509596 18509626 F-element 9 3463 1.5 2.5 2.0 3.0 3493 chr3L 18506133 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509626 intergenic not near genes chr3L_9_18505001 chr3L_18505001 RAL-810 1261 chr3L 18528625 18528652 chr3L 18537786 18537813 roo 5 9161 5.5 2.5 4.0 1.0 9188 chr3L 18528625 intergenic not near genes chr3L 18533219 intergenic not near genes chr3L 18537813 intergenic not near genes chr3L_5_18530001 chr3L_18530001 RAL-810 1262 chr3L 18546701 18546732 chr3L 18546795 18546826 10 94 2.0 1.5 1.8 3.6 125 chr3L 18546701 intergenic not near genes chr3L 18546764 intergenic not near genes chr3L 18546826 intergenic not near genes chr3L_10_18545001 chr3L_18545001 RAL-810 1263 chr3L 18582219 18582249 chr3L 18582304 18582334 9 85 1.5 2.0 1.8 3.2 115 chr3L 18582219 intergenic not near genes chr3L 18582276 intergenic not near genes chr3L 18582334 intergenic not near genes chr3L_9_18580001 chr3L_18580001 RAL-810 1264 chr3L 18586570 18586596 chr3L 18586669 18586694 7 99 2.0 1.0 1.5 2.8 124 chr3L 18586570 intergenic not near genes chr3L 18586632 intergenic not near genes chr3L 18586694 intergenic not near genes chr3L_7_18585001 chr3L_18585001 RAL-810 1265 chr3L 18593950 18593977 chr3L 18595930 18595957 Doc 9 1980 2.0 1.5 1.8 3.2 2007 chr3L 18593950 intergenic term - chr3L 18594954 intergenic not near genes chr3L 18595957 intergenic CR45389 + chr3L_9_18590001 chr3L_18590001 RAL-810 1266 chr3L 18688949 18688973 chr3L 18689051 18689073 12 102 3.5 3.0 3.2 2.9 124 chr3L 18688949 intergenic not near genes chr3L 18689011 intergenic not near genes chr3L 18689073 intergenic not near genes chr3L_12_18685001 chr3L_18685001 RAL-810 1267 chr3L 18710775 18710781 chr3L 18718726 18718733 Stalker2 4 7952 4.0 5.0 4.5 0.7 7958 chr3L 18710775 intergenic not near genes chr3L 18714754 intergenic not near genes chr3L 18718733 intergenic not near genes chr3L_4_18710001 chr3L_18710001 RAL-810 1268 chr3L 18721772 18721804 chr3L 18721863 18721895 8 90 2.5 3.5 3.0 2.0 123 chr3L 18721772 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721895 3` UTR CG12477 - chr3L_8_18720001 chr3L_18720001 RAL-810 1269 chr3L 18753551 18753566 chr3L 18753631 18753648 8 80 1.5 2.5 2.0 2.7 97 chr3L 18753551 intron ftz-f1 - chr3L 18753600 intron ftz-f1 - chr3L 18753648 intron ftz-f1 - chr3L_8_18750001 chr3L_18750001 RAL-810 1270 chr3L 18772415 18772438 chr3L 18781096 18781119 roo 6 8681 2.0 6.0 4.0 1.2 8704 chr3L 18772415 intron ftz-f1 - chr3L 18776767 intron ftz-f1 - chr3L 18781119 intron ftz-f1 - chr3L_6_18775001 chr3L_18775001 RAL-810 1271 chr3L 18810151 18810177 chr3L 18810228 18810254 9 77 1.5 4.0 2.8 2.4 103 chr3L 18810151 intron CG14073 - chr3L 18810202 intron CG14073 - chr3L 18810254 intron CG14073 - chr3L_9_18810001 chr3L_18810001 RAL-810 1272 chr3L 18833778 18833812 chr3L 18834941 18834976 1360 6 1163 3.5 1.0 2.2 1.9 1198 chr3L 18833778 intron Indy - chr3L 18834377 intron Indy - chr3L 18834976 intron Indy - chr3L_6_18830001 chr3L_18830001 RAL-810 1273 chr3L 18851399 18851435 chr3L 18851493 18851529 11 94 1.5 2.5 2.0 3.7 130 chr3L 18851399 intergenic not near genes chr3L 18851464 intergenic not near genes chr3L 18851529 intergenic not near genes chr3L_11_18850001 chr3L_18850001 RAL-810 1274 chr3L 18885993 18886016 chr3L 18886068 18886092 6 76 1.5 3.0 2.2 1.9 99 chr3L 18885993 intron CG3961 - chr3L 18886042 intron CG3961 - chr3L 18886092 intron CG3961 - chr3L_6_18885001 chr3L_18885001 RAL-810 1275 chr3L 18916494 18916516 chr3L 18916600 18916622 4 105 4.0 0.5 2.2 1.2 128 chr3L 18916494 intergenic not near genes chr3L 18916558 intergenic not near genes chr3L 18916622 intergenic not near genes chr3L_4_18915001 chr3L_18915001 RAL-810 1276 chr3L 18933630 18933661 chr3L 18933724 18933754 5 93 2.5 1.0 1.8 1.8 124 chr3L 18933630 intron CG32204 - chr3L 18933692 intron CG32204 - chr3L 18933754 intron CG32204 - chr3L_5_18930001 chr3L_18930001 RAL-810 1277 chr3L 18935834 18935863 chr3L 18935922 18935952 8 88 1.0 3.5 2.2 2.5 118 chr3L 18935834 intron CG32204 - chr3L 18935893 intron CG32204 - chr3L 18935952 intron CG32204 - chr3L_8_18935001 chr3L_18935001 RAL-810 1278 chr3L 18969550 18969574 chr3L 18969626 18969650 6 76 5.0 4.0 4.5 1.1 100 chr3L 18969550 intergenic not near genes chr3L 18969600 intergenic not near genes chr3L 18969650 intergenic not near genes chr3L_6_18965001 chr3L_18965001 RAL-810 1279 chr3L 19008845 19008870 chr3L 19009183 19009207 jockey 7 338 6.0 5.5 5.8 1.0 362 chr3L 19008845 intron nkd - chr3L 19009026 intron nkd - chr3L 19009207 intron nkd - chr3L_7_19005001 chr3L_19005001 RAL-810 1280 chr3L 19012863 19012889 chr3L 19012939 19012974 7 78 4.0 4.0 4.0 1.4 111 chr3L 19012863 intron nkd - chr3L 19012918 intron nkd - chr3L 19012974 intron nkd - chr3L_7_19010001 chr3L_19010001 RAL-810 1281 chr3L 19015182 19015214 chr3L 19015266 19015294 4 82 1.0 2.0 1.5 1.6 112 chr3L 19015182 intron nkd - chr3L 19015238 intron nkd - chr3L 19015294 intron nkd - chr3L_4_19015001 chr3L_19015001 RAL-810 1282 chr3L 19115633 19115672 chr3L 19115813 19115848 BS 10 179 1.5 1.5 1.5 4.0 215 chr3L 19115633 intron CG14082 - chr3L 19115740 intron CG14082 - chr3L 19115848 intron CG14082 - chr3L_10_19115001 chr3L_19115001 RAL-810 1283 chr3L 19117046 19117072 chr3L 19124493 19124519 mdg1 12 7446 1.0 3.5 2.2 3.8 7473 chr3L 19117046 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124519 intron CG14082 - chr3L_12_19120001 chr3L_19120001 RAL-810 1284 chr3L 19187323 19187343 chr3L 19187456 19187464 5 131 1.0 3.0 2.0 1.7 141 chr3L 19187323 intron fz2 - chr3L 19187394 intron fz2 - chr3L 19187464 intron fz2 - chr3L_5_19185001 chr3L_19185001 RAL-810 1285 chr3L 19208059 19208091 chr3L 19209433 19209465 Doc 8 1374 2.0 0.0 1.0 4.0 1406 chr3L 19208059 intron fz2 - chr3L 19208762 intron fz2 - chr3L 19209465 intron fz2 - chr3L_8_19205001 chr3L_19205001 RAL-810 1286 chr3L 19216514 19216533 chr3L 19216591 19216610 5 77 3.5 0.0 1.8 1.8 96 chr3L 19216514 intron fz2 - chr3L 19216562 intron fz2 - chr3L 19216610 intron fz2 - chr3L_5_19215001 chr3L_19215001 RAL-810 1287 chr3L 19228406 19228427 chr3L 19228499 19228518 7 92 2.5 2.0 2.2 2.2 112 chr3L 19228406 intron fz2 - chr3L 19228462 intron fz2 - chr3L 19228518 intron fz2 - chr3L_7_19225001 chr3L_19225001 RAL-810 1288 chr3L 19231350 19231386 chr3L 19231437 19231473 12 87 1.5 1.0 1.2 5.5 123 chr3L 19231350 intron fz2 - chr3L 19231412 intron fz2 - chr3L 19231473 intron fz2 - chr3L_12_19230001 chr3L_19230001 RAL-810 1289 chr3L 19232860 19232890 chr3L 19232942 19232972 8 82 2.0 3.5 2.8 2.1 112 chr3L 19232860 intron fz2 - chr3L 19232916 intron fz2 - chr3L 19232972 intron fz2 - chr3L_8_19230001 chr3L_19230001 RAL-810 1290 chr3L 19342763 19342776 chr3L 19342854 19342867 5 91 2.5 3.0 2.8 1.3 104 chr3L 19342763 3` UTR CG32206 - chr3L 19342815 3` UTR CG32206 - chr3L 19342867 3` UTR CG32206 - chr3L_5_19340001 chr3L_19340001 RAL-810 1291 chr3L 19365918 19365930 chr3L 19366015 19366027 5 97 0.0 4.5 2.2 1.6 109 chr3L 19365918 intron CG32206 - chr3L 19365972 intron CG32206 - chr3L 19366027 intron CG32206 - chr3L_5_19365001 chr3L_19365001 RAL-810 1292 chr3L 19426750 19426781 chr3L 19426825 19426856 9 76 1.0 3.5 2.2 2.8 106 chr3L 19426750 intergenic not near genes chr3L 19426803 intergenic not near genes chr3L 19426856 intergenic not near genes chr3L_9_19425001 chr3L_19425001 RAL-810 1293 chr3L 19527927 19527957 chr3L 19528006 19528036 12 79 1.0 3.5 2.2 3.8 109 chr3L 19527927 intergenic not near genes chr3L 19527982 intergenic not near genes chr3L 19528036 intergenic not near genes chr3L_12_19525001 chr3L_19525001 RAL-810 1294 chr3L 19820305 19820319 chr3L 19827853 19827868 412 5 7549 4.0 2.5 3.2 1.2 7563 chr3L 19820305 intron Deaf1 + chr3L 19824086 intron Deaf1 + chr3L 19827868 intron Deaf1 + chr3L_5_19820001 chr3L_19820001 RAL-810 1295 chr3L 19848506 19848532 chr3L 19857696 19857721 roo 11 9189 2.0 2.0 2.0 3.7 9215 chr3L 19848506 intron Papss + chr3L 19853114 intron Papss + chr3L 19857721 intron Papss + chr3L_11_19850001 chr3L_19850001 RAL-810 1296 chr3L 19861821 19861850 chr3L 19863609 19863638 S-element 11 1787 3.5 4.5 4.0 2.2 1817 chr3L 19861821 5` UTR CR45433 + chr3L 19862730 intergenic not near genes chr3L 19863638 intergenic not near genes chr3L_11_19860001 chr3L_19860001 RAL-810 1297 chr3L 19961283 19961299 chr3L 19961494 19961510 5 211 1.5 1.0 1.2 2.3 227 chr3L 19961283 intron Ac76E + chr3L 19961396 intron Ac76E + chr3L 19961510 intron Ac76E + chr3L_5_19960001 chr3L_19960001 RAL-810 1298 chr3L 19975680 19975710 chr3L 19975756 19975786 9 76 3.5 3.0 3.2 2.1 106 chr3L 19975680 intron Ac76E + chr3L 19975733 intron Ac76E + chr3L 19975786 intron Ac76E + chr3L_9_19975001 chr3L_19975001 RAL-810 1299 chr3L 20030337 20030355 chr3L 20030417 20030435 6 80 1.0 2.5 1.8 2.1 98 chr3L 20030337 intergenic not near genes chr3L 20030386 intergenic not near genes chr3L 20030435 intergenic not near genes chr3L_6_20030001 chr3L_20030001 RAL-810 1300 chr3L 20086786 20086808 chr3L 20086863 20086886 6 78 3.5 0.0 1.8 2.1 100 chr3L 20086786 intron sNPF-R - chr3L 20086836 intron sNPF-R - chr3L 20086886 intron sNPF-R - chr3L_6_20085001 chr3L_20085001 RAL-810 1301 chr3L 20113414 20113442 chr3L 20113501 20113529 13 86 3.5 3.5 3.5 2.9 115 chr3L 20113414 intergenic not near genes chr3L 20113472 intergenic not near genes chr3L 20113529 intergenic not near genes chr3L_13_20110001 chr3L_20110001 RAL-810 1302 chr3L 20113667 20113691 chr3L 20122924 20122948 roo 6 9257 4.5 2.5 3.5 1.3 9281 chr3L 20113667 intergenic not near genes chr3L 20118308 intergenic not near genes chr3L 20122948 intergenic not near genes chr3L_6_20115001 chr3L_20115001 RAL-810 1303 chr3L 20145562 20145586 chr3L 20145890 20145914 7 328 3.5 1.0 2.2 2.2 352 chr3L 20145562 intergenic not near genes chr3L 20145738 intergenic not near genes chr3L 20145914 intergenic not near genes chr3L_7_20145001 chr3L_20145001 RAL-810 1304 chr3L 20148283 20148317 chr3L 20148373 20148404 5 89 1.5 1.0 1.2 2.3 121 chr3L 20148283 intergenic not near genes chr3L 20148344 intergenic not near genes chr3L 20148404 intergenic not near genes chr3L_5_20145001 chr3L_20145001 RAL-810 1305 chr3L 20149118 20149139 chr3L 20149251 20149272 5 133 1.5 2.5 2.0 1.7 154 chr3L 20149118 intergenic CG42674 - chr3L 20149195 intergenic CG42674 - chr3L 20149272 intergenic CG42674 - chr3L_5_20145001 chr3L_20145001 RAL-810 1306 chr3L 20156175 20156182 chr3L 20156296 20156304 6 121 4.0 2.5 3.2 1.4 129 chr3L 20156175 intron CG42674 - chr3L 20156240 intron CG42674 - chr3L 20156304 intron CG42674 - chr3L_6_20155001 chr3L_20155001 RAL-810 1307 chr3L 20182351 20182363 chr3L 20182453 20182465 5 102 5.0 3.5 4.2 1.0 114 chr3L 20182351 intron CG42674 - chr3L 20182408 intron CG42674 - chr3L 20182465 intron CG42674 - chr3L_5_20180001 chr3L_20180001 RAL-810 1308 chr3L 20183424 20183440 chr3L 20183524 20183540 4 100 0.0 4.0 2.0 1.3 116 chr3L 20183424 intron CG42674 - chr3L 20183482 intron CG42674 - chr3L 20183540 intron CG42674 - chr3L_4_20180001 chr3L_20180001 RAL-810 1309 chr3L 20223342 20223365 chr3L 20223537 20223560 4 194 3.0 5.0 4.0 0.8 218 chr3L 20223342 intergenic CG17145 + chr3L 20223451 intergenic CG17145 +,CG17147 + chr3L 20223560 intergenic CG17145 +,CG17147 + chr3L_4_20220001 chr3L_20220001 RAL-810 1310 chr3L 20256635 20256669 chr3L 20256745 20256776 7 108 1.0 1.5 1.2 3.2 141 chr3L 20256635 exon rdgC + chr3L 20256706 intron rdgC + chr3L 20256776 intron rdgC + chr3L_7_20255001 chr3L_20255001 RAL-810 1311 chr3L 20257337 20257358 chr3L 20258457 20258478 pogo 4 1120 2.5 1.0 1.8 1.4 1141 chr3L 20257337 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258478 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-810 1312 chr3L 20377197 20377219 chr3L 20377347 20377369 7 150 2.0 4.0 3.0 1.8 172 chr3L 20377197 intron RhoBTB + chr3L 20377283 intron RhoBTB + chr3L 20377369 intron RhoBTB + chr3L_7_20375001 chr3L_20375001 RAL-810 1313 chr3L 20451275 20451301 chr3L 20451516 20451542 6 241 2.5 2.5 2.5 1.7 267 chr3L 20451275 intron CG5199 - chr3L 20451408 intron CG5199 - chr3L 20451542 intron CG5199 - chr3L_6_20450001 chr3L_20450001 RAL-810 1314 chr3L 20462589 20462599 chr3L 20462670 20462680 4 81 1.5 0.0 0.8 2.2 91 chr3L 20462589 intron atk - chr3L 20462634 intron atk - chr3L 20462680 intron atk - chr3L_4_20460001 chr3L_20460001 RAL-810 1315 chr3L 20476752 20476776 chr3L 20484351 20484375 springer 8 7599 4.5 4.0 4.2 1.5 7623 chr3L 20476752 3` UTR isoQC + chr3L 20480564 intergenic not near genes chr3L 20484375 3` UTR ZnT77C - chr3L_8_20480001 chr3L_20480001 RAL-810 1316 chr3L 17610592 17610593 chr3L 20493659 20493662 9 2883067 14.0 12.0 13.0 0.6 2883070 chr3L 17610592 intron Eip74EF - chr3L 19052127 intergenic Acp76A -,CR44675 + chr3L 20493662 intron,intron ZnT77C -,CG6020 + chr3L_9_19050001 chr3L_19050001 RAL-810 1317 chr3L 20525228 20525228 chr3L 22908066 22908066 4 2382838 11.5 17.5 14.5 0.3 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-810 1318 chr3L 20525229 20525229 chr3L 22908066 22908067 11 2382837 11.5 17.5 14.5 0.7 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_11_21715001 chr3L_21715001 RAL-810 1319 chr3L 20525230 20525230 chr3L 22908066 22908067 7 2382837 11.0 17.5 14.2 0.5 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_7_21715001 chr3L_21715001 RAL-810 1320 chr3L 20536233 20536267 chr3L 20536431 20536465 7 198 2.5 3.0 2.8 1.8 232 chr3L 20536233 intron Rcd2 - chr3L 20536349 intron Rcd2 - chr3L 20536465 intron Rcd2 - chr3L_7_20535001 chr3L_20535001 RAL-810 1321 chr3L 20556852 20556883 chr3L 20557141 20557172 8 289 1.0 4.0 2.5 2.3 320 chr3L 20556852 intergenic not near genes chr3L 20557012 intergenic not near genes chr3L 20557172 intergenic not near genes chr3L_8_20555001 chr3L_20555001 RAL-810 1322 chr3L 20616139 20616175 chr3L 20616341 20616372 7 201 1.5 1.0 1.2 3.2 233 chr3L 20616139 intron knrl - chr3L 20616256 intron knrl - chr3L 20616372 intron knrl - chr3L_7_20615001 chr3L_20615001 RAL-810 1323 chr3L 20821294 20821309 chr3L 20824763 20824778 NOF 6 3469 4.0 5.0 4.5 1.1 3484 chr3L 20821294 intron Pka-R1 + chr3L 20823036 intron Pka-R1 + chr3L 20824778 intron Pka-R1 + chr3L_6_20820001 chr3L_20820001 RAL-810 1324 chr3L 20849276 20849302 chr3L 20849355 20849381 6 78 2.5 4.5 3.5 1.3 105 chr3L 20849276 intron CG32432 - chr3L 20849328 intron CG32432 - chr3L 20849381 intron CG32432 - chr3L_6_20845001 chr3L_20845001 RAL-810 1325 chr3L 21082221 21082237 chr3L 21082299 21082315 6 78 4.0 2.0 3.0 1.5 94 chr3L 21082221 intron ko - chr3L 21082268 intron ko - chr3L 21082315 intron ko - chr3L_6_21080001 chr3L_21080001 RAL-810 1326 chr3L 21151864 21151890 chr3L 21156948 21156973 flea 6 5083 3.0 1.0 2.0 2.0 5109 chr3L 21151864 intron Ac78C - chr3L 21154418 intron Ac78C - chr3L 21156973 intron Ac78C - chr3L_6_21150001 chr3L_21150001 RAL-810 1327 chr3L 21186972 21187002 chr3L 21187053 21187083 7 81 5.0 1.0 3.0 1.8 111 chr3L 21186972 intron CG42337 - chr3L 21187028 intron CG42337 - chr3L 21187083 intron CG42337 - chr3L_7_21185001 chr3L_21185001 RAL-810 1328 chr3L 21306150 21306181 chr3L 21315309 21315340 roo 15 9158 3.5 1.0 2.2 4.7 9190 chr3L 21306150 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310745 intron Pc - chr3L 21315340 3` UTR Pc - chr3L_15_21310001 chr3L_21310001 RAL-810 1329 chr3L 21393626 21393653 chr3L 21393725 21393753 11 99 4.5 2.5 3.5 2.4 127 chr3L 21393626 intron rgn + chr3L 21393690 intron rgn + chr3L 21393753 intron rgn + chr3L_11_21390001 chr3L_21390001 RAL-810 1330 chr3L 21408458 21408484 chr3L 21408536 21408562 10 78 1.5 3.5 2.5 2.9 104 chr3L 21408458 intron rgn + chr3L 21408510 intron rgn + chr3L 21408562 intron rgn + chr3L_10_21405001 chr3L_21405001 RAL-810 1331 chr3L 21415150 21415166 chr3L 21415233 21415247 5 83 0.5 5.5 3.0 1.2 97 chr3L 21415150 intron rgn + chr3L 21415198 intron rgn + chr3L 21415247 intron rgn + chr3L_5_21415001 chr3L_21415001 RAL-810 1332 chr3L 21432243 21432271 chr3L 21432347 21432375 9 103 1.0 3.0 2.0 3.0 132 chr3L 21432243 intron,exon barc -,CG33288 + chr3L 21432309 intron,exon barc -,CG33288 + chr3L 21432375 intron,exon barc -,CG33288 + chr3L_9_21430001 chr3L_21430001 RAL-810 1333 chr3L 4341331 4341332 chr3L 21448027 21448027 5 17106695 6.5 9.0 7.8 0.6 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-810 1334 chr3L 21558553 21558578 chr3L 21558878 21558907 7 328 2.5 2.5 2.5 2.0 354 chr3L 21558553 intergenic CG7173 -,CapaR - chr3L 21558730 intergenic CapaR - chr3L 21558907 intergenic CapaR - chr3L_7_21555001 chr3L_21555001 RAL-810 1335 chr3L 21639199 21639224 chr3L 21639278 21639303 7 79 4.5 2.5 3.5 1.6 104 chr3L 21639199 intergenic CG32444 +,CG32445 + chr3L 21639251 intergenic CG32445 +,CG32444 + chr3L 21639303 intergenic CG32445 +,CG32444 + chr3L_7_21635001 chr3L_21635001 RAL-810 1336 chr3L 21657009 21657027 chr3L 21657090 21657120 5 91 1.5 4.0 2.8 1.3 111 chr3L 21657009 intron CG43980 + chr3L 21657064 intron CG43980 + chr3L 21657120 intron CG43980 + chr3L_5_21655001 chr3L_21655001 RAL-810 1337 chr3L 21742504 21742536 chr3L 21742608 21742640 8 103 3.0 3.0 3.0 2.0 136 chr3L 21742504 intergenic CG14572 + chr3L 21742572 intergenic CG14572 + chr3L 21742640 intergenic CG14572 + chr3L_8_21740001 chr3L_21740001 RAL-810 1338 chr3L 21749320 21749350 chr3L 21754480 21754510 Doc 4 5154 2.0 2.0 2.0 1.3 5190 chr3L 21749320 intron Syn1 - chr3L 21751915 intron Syn1 - chr3L 21754510 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-810 1339 chr3L 21767037 21767068 chr3L 21767117 21767145 6 80 4.0 5.0 4.5 1.1 108 chr3L 21767037 intron Syn1 - chr3L 21767091 intron Syn1 - chr3L 21767145 intron Syn1 - chr3L_6_21765001 chr3L_21765001 RAL-810 1340 chr3L 21787610 21787634 chr3L 21787688 21787712 6 78 3.0 2.5 2.8 1.6 102 chr3L 21787610 intergenic not near genes chr3L 21787661 intergenic not near genes chr3L 21787712 intergenic not near genes chr3L_6_21785001 chr3L_21785001 RAL-810 1341 chr3L 21799936 21799963 chr3L 21800021 21800045 8 84 4.0 2.5 3.2 1.9 109 chr3L 21799936 intergenic not near genes chr3L 21799990 intergenic not near genes chr3L 21800045 intergenic not near genes chr3L_8_21795001 chr3L_21795001 RAL-810 1342 chr3L 21836726 21836758 chr3L 21836812 21836844 10 85 2.0 3.0 2.5 2.9 118 chr3L 21836726 3` UTR P5CDh1 - chr3L 21836785 3` UTR P5CDh1 - chr3L 21836844 3` UTR P5CDh1 - chr3L_10_21835001 chr3L_21835001 RAL-810 1343 chr3L 21849502 21849533 chr3L 21849584 21849615 6 82 1.0 2.0 1.5 2.4 113 chr3L 21849502 intron mub + chr3L 21849558 intron mub + chr3L 21849615 intron mub + chr3L_6_21845001 chr3L_21845001 RAL-810 1344 chr3L 21852262 21852271 chr3L 21852355 21852364 4 91 3.5 4.5 4.0 0.8 102 chr3L 21852262 intron mub + chr3L 21852313 intron mub + chr3L 21852364 intron mub + chr3L_4_21850001 chr3L_21850001 RAL-810 1345 chr3L 21873472 21873505 chr3L 21873557 21873591 5 83 1.5 3.0 2.2 1.6 119 chr3L 21873472 intron mub + chr3L 21873532 intron mub + chr3L 21873591 intron mub + chr3L_5_21870001 chr3L_21870001 RAL-810 1346 chr3L 21905349 21905364 chr3L 21905417 21905432 6 76 2.5 3.0 2.8 1.6 83 chr3L 21905349 intron mub + chr3L 21905390 intron mub + chr3L 21905432 intron mub + chr3L_6_21905001 chr3L_21905001 RAL-810 1347 chr3L 21966472 21966505 chr3L 21966555 21966588 7 82 1.0 1.5 1.2 3.2 116 chr3L 21966472 intron CS-2 + chr3L 21966530 intron CS-2 + chr3L 21966588 intron CS-2 + chr3L_7_21965001 chr3L_21965001 RAL-810 1348 chr3L 21994437 21994470 chr3L 21994518 21994551 9 81 2.0 3.0 2.5 2.6 114 chr3L 21994437 intergenic not near genes chr3L 21994494 intergenic not near genes chr3L 21994551 intergenic not near genes chr3L_9_21990001 chr3L_21990001 RAL-810 1349 chr3L 22010624 22010658 chr3L 22010773 22010807 7 149 0.0 4.5 2.2 2.2 183 chr3L 22010624 intergenic not near genes chr3L 22010716 intergenic not near genes chr3L 22010807 intergenic not near genes chr3L_7_22010001 chr3L_22010001 RAL-810 1350 chr3L 22012349 22012375 chr3L 22012503 22012530 5 155 2.0 3.0 2.5 1.4 181 chr3L 22012349 intergenic not near genes chr3L 22012440 intergenic not near genes chr3L 22012530 intergenic not near genes chr3L_5_22010001 chr3L_22010001 RAL-810 1351 chr3L 22023216 22023250 chr3L 22023308 22023342 13 90 0.5 3.0 1.8 4.6 126 chr3L 22023216 intergenic not near genes chr3L 22023279 intergenic not near genes chr3L 22023342 intergenic not near genes chr3L_13_22020001 chr3L_22020001 RAL-810 1352 chr3L 22099673 22099708 chr3L 22105859 22105891 3S18 11 6185 2.0 2.0 2.0 3.7 6218 chr3L 22099673 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105891 intergenic not near genes chr3L_11_22100001 chr3L_22100001 RAL-810 1353 chr3L 22166447 22166471 chr3L 22166525 22166543 6 77 1.5 1.5 1.5 2.4 96 chr3L 22166447 intron olf413 + chr3L 22166495 intron olf413 + chr3L 22166543 intron olf413 + chr3L_6_22165001 chr3L_22165001 RAL-810 1354 chr3L 22179092 22179115 chr3L 22179176 22179200 4 84 2.5 1.5 2.0 1.3 108 chr3L 22179092 intron olf413 + chr3L 22179146 intron olf413 + chr3L 22179200 intron olf413 + chr3L_4_22175001 chr3L_22175001 RAL-810 1355 chr3L 22447196 22447234 chr3L 22447287 22447325 9 91 1.5 4.0 2.8 2.4 129 chr3L 22447196 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447325 intergenic not near genes chr3L_9_22445001 chr3L_22445001 RAL-810 1356 chr3L 22522702 22522725 chr3L 22522779 22522802 5 77 4.0 2.5 3.2 1.2 100 chr3L 22522702 intergenic not near genes chr3L 22522752 intergenic not near genes chr3L 22522802 intergenic not near genes chr3L_5_22520001 chr3L_22520001 RAL-810 1357 chr3L 22554427 22554455 chr3L 22554503 22554530 11 76 1.0 3.5 2.2 3.4 103 chr3L 22554427 intergenic not near genes chr3L 22554478 intergenic not near genes chr3L 22554530 intergenic not near genes chr3L_11_22550001 chr3L_22550001 RAL-810 1358 chr3L 22555769 22555799 chr3L 22563239 22563252 blood 5 7463 2.5 2.5 2.5 1.4 7483 chr3L 22555769 intergenic not near genes chr3L 22559510 intergenic not near genes chr3L 22563252 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-810 1359 chr3L 22570426 22570456 chr3L 22570570 22570598 13 144 2.0 3.0 2.5 3.7 172 chr3L 22570426 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570598 intergenic not near genes chr3L_13_22570001 chr3L_22570001 RAL-810 1360 chr3L 22617191 22617209 chr3L 22624643 22624661 blood 4 7452 3.0 3.0 3.0 1.0 7470 chr3L 22617191 intron CG14459 - chr3L 22620926 intron CG14459 - chr3L 22624661 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-810 1361 chr3L 22678078 22678110 chr3L 22678170 22678202 4 84 1.5 1.5 1.5 1.6 124 chr3L 22678078 intron CG14457 + chr3L 22678140 intron CG14457 + chr3L 22678202 intron CG14457 + chr3L_4_22675001 chr3L_22675001 RAL-810 1362 chr3L 22689102 22689112 chr3L 22689189 22689200 4 88 1.5 1.5 1.5 1.6 98 chr3L 22689102 intergenic not near genes chr3L 22689151 intergenic not near genes chr3L 22689200 intergenic not near genes chr3L_4_22685001 chr3L_22685001 RAL-810 1363 chr3L 22761389 22761419 chr3L 22766822 22766853 Ivk 15 5434 4.0 2.5 3.2 3.6 5464 chr3L 22761389 intron SPoCk + chr3L 22764121 intron SPoCk + chr3L 22766853 intron SPoCk + chr3L_15_22760001 chr3L_22760001 RAL-810 1364 chr3L 22838590 22838604 chr3L 22838669 22838685 4 80 5.0 2.0 3.5 0.9 95 chr3L 22838590 intergenic CG11226 + chr3L 22838638 intergenic CG11226 + chr3L 22838685 intergenic not near genes chr3L_4_22835001 chr3L_22835001 RAL-810 1365 chr3L 22853462 22853707 chr3L 22853549 22853793 13 86 2.5 2.0 2.2 4.1 331 chr3L 22853462 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853628 5` UTR CR43426 + chr3L 22853793 5` UTR CR43426 + chr3L_13_22850001 chr3L_22850001 RAL-810 1366 chr3L 22865980 22866011 chr3L 22867113 22867144 Doc 10 1133 3.5 2.0 2.8 2.6 1164 chr3L 22865980 intron CG33170 + chr3L 22866562 intron CG33170 + chr3L 22867144 intron CG33170 + chr3L_10_22865001 chr3L_22865001 RAL-810 1367 chr3L 20525228 20525230 chr3L 22908066 22908066 20 2382837 11.0 17.5 14.2 1.3 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_20_21715001 chr3L_21715001 RAL-810 1368 chr3L 20525229 20525230 chr3L 22908067 22908067 15 2382837 11.0 17.0 14.0 1.0 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_15_21715001 chr3L_21715001 RAL-810 1369 chr3L 22909030 22909056 chr3L 22910202 22910228 9 1171 1.5 3.0 2.2 2.8 1198 chr3L 22909030 intergenic CR45661 + chr3L 22909629 5` UTR CR45661 + chr3L 22910228 intergenic CG12768 + chr3L_9_22905001 chr3L_22905001 RAL-810 1370 chr3L 22989862 22989888 chr3L 22996836 22996862 297 6 6974 1.0 5.0 3.0 1.5 7000 chr3L 22989862 intergenic not near genes chr3L 22993362 intergenic not near genes chr3L 22996862 intergenic not near genes chr3L_6_22990001 chr3L_22990001 RAL-810 1371 chr3L 23690155 23690177 chr3L 23690914 23690936 6 759 3.0 3.5 3.2 1.4 781 chr3L 23690155 intergenic CR45174 - chr3L 23690546 intergenic CR45174 - chr3L 23690936 3` UTR CR45174 - chr3L_6_23690001 chr3L_23690001 RAL-810 1372 chr3L 23750931 23750962 chr3L 23751132 23751164 9 202 19.0 11.5 15.2 0.6 233 chr3L 23750931 intergenic not near genes chr3L 23751048 intergenic not near genes chr3L 23751164 intergenic not near genes chr3L_9_23750001 chr3L_23750001 RAL-810 1373 chr3L 23824026 23824028 chr3L 23824439 23824441 4 413 5.0 0.5 2.8 1.1 415 chr3L 23824026 intergenic not near genes chr3L 23824234 intergenic not near genes chr3L 23824441 intergenic not near genes chr3L_4_23820001 chr3L_23820001 RAL-810 1374 chr3L 24012403 24012439 chr3L 24020744 24020780 roo 13 8341 3.0 2.0 2.5 3.7 8377 chr3L 24012403 intergenic not near genes chr3L 24016592 intergenic not near genes chr3L 24020780 intergenic not near genes chr3L_13_24015001 chr3L_24015001 RAL-810 1375 chr3L 24152553 24152565 chr3L 24152643 24152657 4 92 3.0 1.0 2.0 1.3 104 chr3L 24152553 intron Snap25 + chr3L 24152605 intron Snap25 + chr3L 24152657 intron Snap25 + chr3L_4_24150001 chr3L_24150001 RAL-810 1376 chr3L 18198930 18198930 chr3L 24821492 24821492 8 6622562 15.5 12.0 13.8 0.5 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_8_21510001 chr3L_21510001 RAL-810 1377 chr3L 20525230 20525230 chr3L 24821493 24821493 4 4296263 11.0 12.0 11.5 0.3 4296263 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-810 1378 chr3L 27390692 27390708 chr3L 27390770 27390787 4 78 21.0 21.5 21.2 0.2 95 chr3L 27390692 intron Dbp80 + chr3L 27390740 intron Dbp80 + chr3L 27390787 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-810 1379 chr3R 2424350 2424365 chr3R 8200120 8200134 5 5775770 5.0 6.0 5.5 0.8 5775784 chr3R 2424350 intergenic not near genes chr3R 5312242 intron mtd - chr3R 8200134 intergenic not near genes chr3R_5_5310001 chr3R_5310001 RAL-810 1380 chr3R 2534140 2534164 chr3R 2541709 2541730 4 7568 4.0 6.0 5.0 0.7 7590 chr3R 2534140 intergenic not near genes chr3R 2537935 intergenic not near genes chr3R 2541730 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-810 1381 chr3R 2556883 2556911 chr3R 2557616 2557644 7 733 14.5 11.0 12.8 0.5 761 chr3R 2556883 intron CG41056 - chr3R 2557264 intron CG41056 - chr3R 2557644 intron CG41056 - chr3R_7_2555001 chr3R_2555001 RAL-810 1382 chr3R 3621287 3621314 chr3R 3621716 3621743 7 428 2.5 3.0 2.8 1.8 456 chr3R 3621287 intergenic not near genes chr3R 3621515 intergenic not near genes chr3R 3621743 intergenic not near genes chr3R_7_3620001 chr3R_3620001 RAL-810 1383 chr3R 4063811 4063829 chr3R 4069091 4069107 4 5280 1.5 9.0 5.2 0.6 5296 chr3R 4063811 intergenic not near genes chr3R 4066459 intergenic not near genes chr3R 4069107 intergenic not near genes chr3R_4_4065001 chr3R_4065001 RAL-810 1384 chr3R 4105041 4105067 chr3R 4110244 4110271 copia 6 5204 2.5 2.5 2.5 1.7 5230 chr3R 4105041 intergenic not near genes chr3R 4107656 intergenic not near genes chr3R 4110271 intergenic not near genes chr3R_6_4105001 chr3R_4105001 RAL-810 1385 chr3R 4132900 4132929 chr3R 4133054 4133083 6 154 1.5 2.0 1.8 2.1 183 chr3R 4132900 5` UTR Gfat1 + chr3R 4132992 intron Gfat1 + chr3R 4133083 intron Gfat1 + chr3R_6_4130001 chr3R_4130001 RAL-810 1386 chr3R 4206070 4206102 chr3R 4211645 4211677 mdg3 7 5575 3.5 5.0 4.2 1.3 5607 chr3R 4206070 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211677 intron CG14636 - chr3R_7_4205001 chr3R_4205001 RAL-810 1387 chr3R 4289364 4289391 chr3R 4289729 4289755 9 363 2.5 3.5 3.0 2.2 391 chr3R 4289364 intron cpx + chr3R 4289560 intron cpx + chr3R 4289755 intron cpx + chr3R_9_4285001 chr3R_4285001 RAL-810 1388 chr3R 4366756 4366788 chr3R 4375139 4375171 roo 8 8383 1.5 5.0 3.2 1.9 8415 chr3R 4366756 3` UTR CG1090 + chr3R 4370964 intergenic not near genes chr3R 4375171 5` UTR CR44922 + chr3R_8_4370001 chr3R_4370001 RAL-810 1389 chr3R 4408411 4408442 chr3R 4412715 4412746 Juan 10 4304 2.0 4.0 3.0 2.5 4335 chr3R 4408411 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412746 intron CG32944 - chr3R_10_4410001 chr3R_4410001 RAL-810 1390 chr3R 4698248 4698281 chr3R 4698337 4698370 10 88 2.0 1.5 1.8 3.6 122 chr3R 4698248 exon CG43427 + chr3R 4698309 intron CG43427 + chr3R 4698370 intron CG43427 + chr3R_10_4695001 chr3R_4695001 RAL-810 1391 chr3R 4719478 4719496 chr3R 4719681 4719704 7 207 0.0 1.5 0.8 3.9 226 chr3R 4719478 3` UTR Nep2 - chr3R 4719591 3` UTR Nep2 - chr3R 4719704 3` UTR Nep2 - chr3R_7_4715001 chr3R_4715001 RAL-810 1392 chr3R 4753241 4753257 chr3R 4757543 4757559 F-element 5 4302 4.0 3.0 3.5 1.1 4318 chr3R 4753241 intron,intron atms +,CG44098 - chr3R 4755400 intron,intron atms +,CG44098 - chr3R 4757559 intron,exon atms +,CG44098 - chr3R_5_4755001 chr3R_4755001 RAL-810 1393 chr3R 4764468 4764488 chr3R 4764701 4764721 5 233 3.0 2.0 2.5 1.4 253 chr3R 4764468 intron,intron atms +,CG44098 - chr3R 4764594 intron,intron atms +,CG44098 - chr3R 4764721 intron,intron atms +,CG44098 - chr3R_5_4760001 chr3R_4760001 RAL-810 1394 chr3R 4769159 4769188 chr3R 4769237 4769266 11 78 3.0 1.5 2.2 3.4 107 chr3R 4769159 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769266 intron,intron atms +,CG44098 - chr3R_11_4765001 chr3R_4765001 RAL-810 1395 chr3R 4887477 4887490 chr3R 4894854 4894867 rover 5 7377 1.0 2.0 1.5 2.0 7390 chr3R 4887477 intergenic not near genes chr3R 4891172 intergenic not near genes chr3R 4894867 intergenic not near genes chr3R_5_4890001 chr3R_4890001 RAL-810 1396 chr3R 4896290 4896325 chr3R 4896383 4896418 7 93 2.0 6.0 4.0 1.4 128 chr3R 4896290 intergenic CR45580 + chr3R 4896354 intergenic CR45580 + chr3R 4896418 5` UTR CR45580 + chr3R_7_4895001 chr3R_4895001 RAL-810 1397 chr3R 4951314 4951341 chr3R 4951411 4951438 9 97 3.0 3.0 3.0 2.2 124 chr3R 4951314 intron UbcD6 - chr3R 4951376 intron UbcD6 - chr3R 4951438 intron UbcD6 - chr3R_9_4950001 chr3R_4950001 RAL-810 1398 chr3R 4975938 4975965 chr3R 4976039 4976066 8 101 3.0 1.0 2.0 2.7 128 chr3R 4975938 intergenic not near genes chr3R 4976002 intergenic not near genes chr3R 4976066 intergenic not near genes chr3R_8_4975001 chr3R_4975001 RAL-810 1399 chr3R 4984294 4984328 chr3R 4984386 4984420 10 92 2.5 4.0 3.2 2.4 126 chr3R 4984294 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984357 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984420 intergenic CR43424 -,CG14662 - chr3R_10_4980001 chr3R_4980001 RAL-810 1400 chr3R 5045846 5045871 chr3R 5052946 5052973 HMS-Beagle 5 7102 6.5 2.0 4.2 1.0 7127 chr3R 5045846 intron CR43635 - chr3R 5049410 intergenic not near genes chr3R 5052973 intergenic CR45588 - chr3R_5_5045001 chr3R_5045001 RAL-810 1401 chr3R 5067979 5068012 chr3R 5073496 5073529 mdg3 17 5517 4.0 1.0 2.5 4.9 5550 chr3R 5067979 intergenic not near genes chr3R 5070754 intergenic not near genes chr3R 5073529 intergenic not near genes chr3R_17_5070001 chr3R_5070001 RAL-810 1402 chr3R 5115010 5115044 chr3R 5115103 5115138 9 94 5.5 3.5 4.5 1.6 128 chr3R 5115010 intergenic not near genes chr3R 5115074 intergenic not near genes chr3R 5115138 intergenic not near genes chr3R_9_5115001 chr3R_5115001 RAL-810 1403 chr3R 5203497 5203531 chr3R 5203576 5203610 12 78 1.0 3.0 2.0 4.0 113 chr3R 5203497 intron cno - chr3R 5203554 intron cno - chr3R 5203610 intron cno - chr3R_12_5200001 chr3R_5200001 RAL-810 1404 chr3R 5327193 5327198 chr3R 5327268 5327275 4 76 4.0 5.0 4.5 0.7 82 chr3R 5327193 intron mtd - chr3R 5327234 intron mtd - chr3R 5327275 intron mtd - chr3R_4_5325001 chr3R_5325001 RAL-810 1405 chr3R 5338402 5338427 chr3R 5343579 5343604 Rt1c 9 5177 2.5 5.5 4.0 1.8 5202 chr3R 5338402 intron mtd - chr3R 5341003 intron mtd - chr3R 5343604 intron mtd - chr3R_9_5340001 chr3R_5340001 RAL-810 1406 chr3R 5445959 5445994 chr3R 5452419 5452454 Burdock 12 6460 1.5 2.5 2.0 4.0 6495 chr3R 5445959 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452454 intron CG14669 + chr3R_12_5445001 chr3R_5445001 RAL-810 1407 chr3R 5726088 5726123 chr3R 5726250 5726285 7 162 2.5 4.0 3.2 1.7 197 chr3R 5726088 intergenic not near genes chr3R 5726186 intergenic not near genes chr3R 5726285 intergenic not near genes chr3R_7_5725001 chr3R_5725001 RAL-810 1408 chr3R 5746016 5746042 chr3R 5746257 5746283 pogo 10 241 4.5 4.5 4.5 1.8 267 chr3R 5746016 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746283 3` UTR Madm + chr3R_10_5745001 chr3R_5745001 RAL-810 1409 chr3R 5747010 5747044 chr3R 5753201 5753235 diver 12 6191 4.0 3.0 3.5 2.7 6225 chr3R 5747010 intergenic Madm + chr3R 5750122 intergenic not near genes chr3R 5753235 intergenic CG2091 - chr3R_12_5750001 chr3R_5750001 RAL-810 1410 chr3R 5772377 5772403 chr3R 5772535 5772561 6 158 2.5 1.5 2.0 2.0 184 chr3R 5772377 intron CG2082 - chr3R 5772469 intron CG2082 - chr3R 5772561 intron CG2082 - chr3R_6_5770001 chr3R_5770001 RAL-810 1411 chr3R 5809121 5809145 chr3R 5809362 5809386 pogo 5 240 1.0 3.5 2.2 1.6 265 chr3R 5809121 3` UTR CG11000 + chr3R 5809254 3` UTR CG11000 + chr3R 5809386 3` UTR CG11000 + chr3R_5_5805001 chr3R_5805001 RAL-810 1412 chr3R 5822380 5822412 chr3R 5823547 5823579 1360 6 1166 3.5 1.5 2.5 1.7 1199 chr3R 5822380 3` UTR CG2023 - chr3R 5822980 3` UTR CG2023 - chr3R 5823579 3` UTR CG2023 - chr3R_6_5820001 chr3R_5820001 RAL-810 1413 chr3R 5846874 5846899 chr3R 5846950 5846975 9 76 5.5 4.0 4.8 1.6 101 chr3R 5846874 intergenic CG1213 +,CG14676 + chr3R 5846924 intergenic CG14676 +,CG1213 + chr3R 5846975 intergenic CG14676 +,CG1213 + chr3R_9_5845001 chr3R_5845001 RAL-810 1414 chr3R 5895960 5895989 chr3R 5896174 5896203 4 214 1.5 3.0 2.2 1.2 243 chr3R 5895960 intron CG34113 - chr3R 5896082 intron CG34113 - chr3R 5896203 intron CG34113 - chr3R_4_5895001 chr3R_5895001 RAL-810 1415 chr3R 5927561 5927588 chr3R 5927800 5927823 pogo 11 239 1.5 1.0 1.2 5.0 262 chr3R 5927561 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927823 intron CG34113 - chr3R_11_5925001 chr3R_5925001 RAL-810 1416 chr3R 6048443 6048478 chr3R 6048526 6048561 11 83 3.0 2.5 2.8 2.9 118 chr3R 6048443 intergenic not near genes chr3R 6048502 intergenic not near genes chr3R 6048561 intergenic not near genes chr3R_11_6045001 chr3R_6045001 RAL-810 1417 chr3R 6110446 6110472 chr3R 6110630 6110656 8 184 1.0 2.5 1.8 2.9 210 chr3R 6110446 exon Obp83ef - chr3R 6110551 intron Obp83ef - chr3R 6110656 intron Obp83ef - chr3R_8_6110001 chr3R_6110001 RAL-810 1418 chr3R 6147805 6147829 chr3R 6147899 6147923 5 93 1.0 0.5 0.8 2.8 118 chr3R 6147805 intergenic not near genes chr3R 6147864 intergenic not near genes chr3R 6147923 intergenic not near genes chr3R_5_6145001 chr3R_6145001 RAL-810 1419 chr3R 6158508 6158535 chr3R 6167091 6167118 Tirant 5 8583 3.0 2.0 2.5 1.4 8610 chr3R 6158508 intergenic not near genes chr3R 6162813 intergenic not near genes chr3R 6167118 intergenic CG1077 + chr3R_5_6160001 chr3R_6160001 RAL-810 1420 chr3R 6171149 6171173 chr3R 6171511 6171535 10 362 3.0 1.5 2.2 3.1 386 chr3R 6171149 intergenic not near genes chr3R 6171342 intergenic not near genes chr3R 6171535 intergenic not near genes chr3R_10_6170001 chr3R_6170001 RAL-810 1421 chr3R 6175175 6175203 chr3R 6182447 6182475 HMS-Beagle2 5 7271 3.0 4.5 3.8 1.0 7300 chr3R 6175175 intergenic Osi1 + chr3R 6178825 intron CR45194 + chr3R 6182475 intergenic CR45194 + chr3R_5_6175001 chr3R_6175001 RAL-810 1422 chr3R 6334779 6334804 chr3R 6334877 6334902 6 98 3.0 3.5 3.2 1.4 123 chr3R 6334779 intergenic not near genes chr3R 6334840 intergenic not near genes chr3R 6334902 intergenic Osi19 + chr3R_6_6330001 chr3R_6330001 RAL-810 1423 chr3R 6510027 6510055 chr3R 6515108 6515136 jockey 15 5081 4.5 5.0 4.8 2.6 5109 chr3R 6510027 intergenic not near genes chr3R 6512582 intergenic not near genes chr3R 6515136 intergenic not near genes chr3R_15_6510001 chr3R_6510001 RAL-810 1424 chr3R 6541237 6541250 chr3R 6541459 6541472 5 222 1.5 3.5 2.5 1.4 235 chr3R 6541237 intron dpr11 - chr3R 6541354 intron dpr11 - chr3R 6541472 intron dpr11 - chr3R_5_6540001 chr3R_6540001 RAL-810 1425 chr3R 6578888 6578913 chr3R 6579008 6579033 7 120 2.5 1.0 1.8 2.5 145 chr3R 6578888 intron dpr11 - chr3R 6578960 intron dpr11 - chr3R 6579033 intron dpr11 - chr3R_7_6575001 chr3R_6575001 RAL-810 1426 chr3R 6737501 6737529 chr3R 6739288 6739316 Doc 8 1786 2.5 1.5 2.0 2.7 1815 chr3R 6737501 intron pb - chr3R 6738408 intron pb - chr3R 6739316 intron pb - chr3R_8_6735001 chr3R_6735001 RAL-810 1427 chr3R 6978882 6978914 chr3R 6978967 6978999 6 85 1.0 4.0 2.5 1.7 117 chr3R 6978882 intron Antp - chr3R 6978940 intron Antp - chr3R 6978999 intron Antp - chr3R_6_6975001 chr3R_6975001 RAL-810 1428 chr3R 7103293 7103311 chr3R 7103369 7103387 8 76 3.0 3.5 3.2 1.9 94 chr3R 7103293 intron Alh - chr3R 7103340 intron Alh - chr3R 7103387 intron Alh - chr3R_8_7100001 chr3R_7100001 RAL-810 1429 chr3R 7126503 7126530 chr3R 7126598 7126625 12 95 2.0 2.0 2.0 4.0 122 chr3R 7126503 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126564 3` UTR CG10068 - chr3R 7126625 3` UTR CG10068 - chr3R_12_7125001 chr3R_7125001 RAL-810 1430 chr3R 7173682 7173710 chr3R 7173762 7173790 7 80 1.5 6.0 3.8 1.5 108 chr3R 7173682 intron sas + chr3R 7173736 intron sas + chr3R 7173790 intron sas + chr3R_7_7170001 chr3R_7170001 RAL-810 1431 chr3R 7396372 7396390 chr3R 7396475 7396493 8 103 1.0 3.0 2.0 2.7 121 chr3R 7396372 intergenic not near genes chr3R 7396432 intergenic not near genes chr3R 7396493 intergenic not near genes chr3R_8_7395001 chr3R_7395001 RAL-810 1432 chr3R 7402043 7402077 chr3R 7402324 7402359 7 282 0.0 1.0 0.5 4.7 316 chr3R 7402043 intergenic not near genes chr3R 7402201 intergenic not near genes chr3R 7402359 intergenic not near genes chr3R_7_7400001 chr3R_7400001 RAL-810 1433 chr3R 7404949 7404969 chr3R 7405024 7405045 4 76 0.0 0.0 0.0 4.0 96 chr3R 7404949 intergenic not near genes chr3R 7404997 intergenic not near genes chr3R 7405045 intergenic not near genes chr3R_4_7400001 chr3R_7400001 RAL-810 1434 chr3R 7417876 7417895 chr3R 7417961 7417980 6 85 4.0 0.5 2.2 1.9 104 chr3R 7417876 intergenic not near genes chr3R 7417928 intergenic not near genes chr3R 7417980 intergenic not near genes chr3R_6_7415001 chr3R_7415001 RAL-810 1435 chr3R 7444738 7444765 chr3R 7444815 7444842 7 77 5.5 3.0 4.2 1.3 104 chr3R 7444738 intergenic not near genes chr3R 7444790 intergenic not near genes chr3R 7444842 intergenic not near genes chr3R_7_7440001 chr3R_7440001 RAL-810 1436 chr3R 7447992 7448002 chr3R 7448068 7448080 6 78 2.5 2.5 2.5 1.7 88 chr3R 7447992 intergenic not near genes chr3R 7448036 intergenic not near genes chr3R 7448080 intergenic not near genes chr3R_6_7445001 chr3R_7445001 RAL-810 1437 chr3R 7574641 7574651 chr3R 7574723 7574733 5 81 1.5 4.5 3.0 1.2 92 chr3R 7574641 intron CG34127 - chr3R 7574687 intron CG34127 - chr3R 7574733 intron CG34127 - chr3R_5_7570001 chr3R_7570001 RAL-810 1438 chr3R 7578743 7578762 chr3R 7578892 7578910 4 148 4.5 2.5 3.5 0.9 167 chr3R 7578743 intron CG34127 - chr3R 7578826 intron CG34127 - chr3R 7578910 intron CG34127 - chr3R_4_7575001 chr3R_7575001 RAL-810 1439 chr3R 7617992 7618018 chr3R 7618084 7618110 4 92 1.5 1.5 1.5 1.6 118 chr3R 7617992 intron CG34127 - chr3R 7618051 intron CG34127 - chr3R 7618110 intron CG34127 - chr3R_4_7615001 chr3R_7615001 RAL-810 1440 chr3R 7621548 7621564 chr3R 7621638 7621654 6 90 4.0 1.5 2.8 1.6 106 chr3R 7621548 intron CG34127 - chr3R 7621601 intron CG34127 - chr3R 7621654 intron CG34127 - chr3R_6_7620001 chr3R_7620001 RAL-810 1441 chr3R 7655012 7655029 chr3R 7655094 7655111 9 82 4.5 3.0 3.8 1.9 99 chr3R 7655012 intergenic not near genes chr3R 7655062 intergenic not near genes chr3R 7655111 intergenic not near genes chr3R_9_7655001 chr3R_7655001 RAL-810 1442 chr3R 7694576 7694610 chr3R 7713637 7713671 invader3 10 19061 2.5 2.0 2.2 3.1 19095 chr3R 7694576 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713671 intergenic not near genes chr3R_10_7700001 chr3R_7700001 RAL-810 1443 chr3R 7729467 7729499 chr3R 7737403 7737437 Stalker2 13 7937 2.0 2.5 2.2 4.1 7970 chr3R 7729467 intergenic not near genes chr3R 7733452 intergenic not near genes chr3R 7737437 intergenic not near genes chr3R_13_7730001 chr3R_7730001 RAL-810 1444 chr3R 7773344 7773344 chr3R 7890533 7890535 6 117190 15.5 9.5 12.5 0.4 117191 chr3R 7773344 intergenic not near genes chr3R 7831940 intron CG34384 + chr3R 7890535 intron mRpS9 - chr3R_6_7830001 chr3R_7830001 RAL-810 1445 chr3R 7849643 7849675 chr3R 7850810 7850842 1360 12 1167 1.0 6.0 3.5 2.7 1199 chr3R 7849643 intron CG34384 + chr3R 7850242 intron CG34384 + chr3R 7850842 intron CG34384 + chr3R_12_7850001 chr3R_7850001 RAL-810 1446 chr3R 7857640 7857672 chr3R 7857723 7857744 17 82 1.5 2.5 2.0 5.7 104 chr3R 7857640 3` UTR CG17816 - chr3R 7857692 3` UTR CG17816 - chr3R 7857744 3` UTR CG17816 - chr3R_17_7855001 chr3R_7855001 RAL-810 1447 chr3R 7973315 7973342 chr3R 7974377 7974403 1360 5 1062 3.5 2.0 2.8 1.3 1088 chr3R 7973315 intergenic not near genes chr3R 7973859 intergenic not near genes chr3R 7974403 intergenic CD98hc - chr3R_5_7970001 chr3R_7970001 RAL-810 1448 chr3R 8042171 8042183 chr3R 8042361 8042371 4 188 11.5 9.5 10.5 0.3 200 chr3R 8042171 intron CG43060 + chr3R 8042271 intron CG43060 + chr3R 8042371 intron CG43060 + chr3R_4_8040001 chr3R_8040001 RAL-810 1449 chr3R 8049051 8049058 chr3R 8049625 8049632 5 574 5.0 2.0 3.5 1.1 581 chr3R 8049051 intron CG43060 + chr3R 8049342 intron,intron CG43060 +,CG43618 + chr3R 8049632 intron CG43060 + chr3R_5_8045001 chr3R_8045001 RAL-810 1450 chr3R 8082588 8082594 chr3R 8082665 8082671 4 77 5.0 7.0 6.0 0.6 83 chr3R 8082588 intron mAChR-B + chr3R 8082630 intron mAChR-B + chr3R 8082671 intron mAChR-B + chr3R_4_8080001 chr3R_8080001 RAL-810 1451 chr3R 8094408 8094436 chr3R 8099713 8099741 Transpac 7 5305 2.5 5.0 3.8 1.5 5333 chr3R 8094408 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099741 intron CG7900 + chr3R_7_8095001 chr3R_8095001 RAL-810 1452 chr3R 8101763 8101792 chr3R 8104847 8104875 G2 7 3084 4.5 4.0 4.2 1.3 3112 chr3R 8101763 exon CG7900 + chr3R 8103319 intron CG7900 + chr3R 8104875 3` UTR CG7900 + chr3R_7_8100001 chr3R_8100001 RAL-810 1453 chr3R 8107387 8107420 chr3R 8107521 8107554 15 134 2.5 5.0 3.8 3.1 167 chr3R 8107387 intron puc + chr3R 8107470 intron puc + chr3R 8107554 intron puc + chr3R_15_8105001 chr3R_8105001 RAL-810 1454 chr3R 8207556 8207585 chr3R 8208398 8208429 F-element 5 844 2.0 2.0 2.0 1.7 873 chr3R 8207556 intergenic not near genes chr3R 8207992 intergenic not near genes chr3R 8208429 intergenic not near genes chr3R_5_8205001 chr3R_8205001 RAL-810 1455 chr3R 8339246 8339247 chr3R 21907534 21907536 8 13568288 11.5 14.5 13.0 0.6 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_8_15120001 chr3R_15120001 RAL-810 1456 chr3R 8403010 8403036 chr3R 8412175 8412202 roo 7 9166 1.0 3.5 2.2 2.2 9192 chr3R 8403010 intron CG45263 - chr3R 8407606 intron CG45263 - chr3R 8412202 intron CG45263 - chr3R_7_8405001 chr3R_8405001 RAL-810 1457 chr3R 8570476 8570510 chr3R 8575112 8575146 HMS-Beagle 5 4636 0.0 5.5 2.8 1.3 4670 chr3R 8570476 intergenic not near genes chr3R 8572811 intergenic not near genes chr3R 8575146 intergenic not near genes chr3R_5_8570001 chr3R_8570001 RAL-810 1458 chr3R 8601771 8601795 chr3R 8610920 8610947 roo 9 9152 3.0 1.5 2.2 2.8 9176 chr3R 8601771 intron 5-HT2B + chr3R 8606359 intron 5-HT2B + chr3R 8610947 intron 5-HT2B + chr3R_9_8605001 chr3R_8605001 RAL-810 1459 chr3R 8685295 8685315 chr3R 8685395 8685415 9 98 0.5 2.5 1.5 3.6 120 chr3R 8685295 intron CR44937 - chr3R 8685355 intron CR44937 - chr3R 8685415 intron CR44937 - chr3R_9_8685001 chr3R_8685001 RAL-810 1460 chr3R 8707361 8707383 chr3R 8709802 8709823 jockey 6 2441 2.0 3.0 2.5 1.7 2462 chr3R 8707361 intergenic not near genes chr3R 8708592 intergenic not near genes chr3R 8709823 intergenic not near genes chr3R_6_8705001 chr3R_8705001 RAL-810 1461 chr3R 8856362 8856400 chr3R 8856439 8856477 13 77 3.5 3.0 3.2 3.1 115 chr3R 8856362 intron pyd - chr3R 8856420 intron pyd - chr3R 8856477 intron pyd - chr3R_13_8855001 chr3R_8855001 RAL-810 1462 chr3R 8917888 8917909 chr3R 8917968 8917989 11 80 2.5 1.0 1.8 3.9 101 chr3R 8917888 intron pyd - chr3R 8917938 intron pyd - chr3R 8917989 intron pyd - chr3R_11_8915001 chr3R_8915001 RAL-810 1463 chr3R 9082049 9082070 chr3R 9082137 9082164 5 93 5.0 1.5 3.2 1.2 115 chr3R 9082049 intron pum - chr3R 9082106 intron pum - chr3R 9082164 intron pum - chr3R_5_9080001 chr3R_9080001 RAL-810 1464 chr3R 9101837 9101871 chr3R 9101935 9101969 4 98 2.0 3.0 2.5 1.1 132 chr3R 9101837 intron pum - chr3R 9101903 intron pum - chr3R 9101969 intron pum - chr3R_4_9100001 chr3R_9100001 RAL-810 1465 chr3R 9108868 9108883 chr3R 9108944 9108959 6 76 3.0 4.0 3.5 1.3 91 chr3R 9108868 intron pum - chr3R 9108914 intron pum - chr3R 9108959 intron pum - chr3R_6_9105001 chr3R_9105001 RAL-810 1466 chr3R 9134338 9134368 chr3R 9134427 9134457 11 89 1.5 1.5 1.5 4.4 119 chr3R 9134338 intron pum - chr3R 9134398 intron pum - chr3R 9134457 intron pum - chr3R_11_9130001 chr3R_9130001 RAL-810 1467 chr3R 9141147 9141159 chr3R 9141231 9141243 4 84 4.5 5.0 4.8 0.7 96 chr3R 9141147 intron pum - chr3R 9141195 intron pum - chr3R 9141243 intron pum - chr3R_4_9140001 chr3R_9140001 RAL-810 1468 chr3R 9319586 9319609 chr3R 9320021 9320044 jockey 8 435 2.5 6.0 4.2 1.5 458 chr3R 9319586 intron CG8861 - chr3R 9319815 intron CG8861 - chr3R 9320044 intron CG8861 - chr3R_8_9315001 chr3R_9315001 RAL-810 1469 chr3R 9323517 9323525 chr3R 9323590 9323607 5 83 1.5 2.0 1.8 1.8 90 chr3R 9323517 intron CG8861 - chr3R 9323562 intron CG8861 - chr3R 9323607 intron CG8861 - chr3R_5_9320001 chr3R_9320001 RAL-810 1470 chr3R 9361818 9361844 chr3R 9362059 9362085 pogo 11 241 3.5 2.0 2.8 2.9 267 chr3R 9361818 3` UTR CG45050 + chr3R 9361952 3` UTR CG45050 + chr3R 9362085 3` UTR CG45050 + chr3R_11_9360001 chr3R_9360001 RAL-810 1471 chr3R 9382816 9382847 chr3R 9382941 9382972 9 124 1.0 3.5 2.2 2.8 156 chr3R 9382816 intron FER - chr3R 9382894 intron FER - chr3R 9382972 intron FER - chr3R_9_9380001 chr3R_9380001 RAL-810 1472 chr3R 9447443 9447459 chr3R 9447547 9447563 6 104 5.0 6.0 5.5 0.9 120 chr3R 9447443 intron ps + chr3R 9447503 intron ps + chr3R 9447563 intron ps + chr3R_6_9445001 chr3R_9445001 RAL-810 1473 chr3R 9608659 9608689 chr3R 9608925 9608954 8 266 1.5 2.5 2.0 2.7 295 chr3R 9608659 intron CG8312 + chr3R 9608806 intron CG8312 + chr3R 9608954 intron CG8312 + chr3R_8_9605001 chr3R_9605001 RAL-810 1474 chr3R 9611884 9611891 chr3R 9611965 9611973 4 81 9.0 0.0 4.5 0.7 89 chr3R 9611884 intron CG8312 + chr3R 9611928 intron CG8312 + chr3R 9611973 intron CG8312 + chr3R_4_9610001 chr3R_9610001 RAL-810 1475 chr3R 9611894 9611902 chr3R 9611964 9611984 6 80 6.0 0.0 3.0 1.5 90 chr3R 9611894 intron CG8312 + chr3R 9611939 intron CG8312 + chr3R 9611984 intron CG8312 + chr3R_6_9610001 chr3R_9610001 RAL-810 1476 chr3R 9702262 9702292 chr3R 9702338 9702368 12 75 3.0 2.0 2.5 3.4 106 chr3R 9702262 intron Unc-115a - chr3R 9702315 intron Unc-115a - chr3R 9702368 intron Unc-115a - chr3R_12_9700001 chr3R_9700001 RAL-810 1477 chr3R 10073773 10073794 chr3R 10073882 10073903 8 109 4.5 2.5 3.5 1.8 130 chr3R 10073773 intergenic nerfin-2 +,CG5361 - chr3R 10073838 3` UTR CG5361 - chr3R 10073903 exon CG5361 - chr3R_8_10070001 chr3R_10070001 RAL-810 1478 chr3R 10192287 10192303 chr3R 10192473 10192489 5 186 2.5 2.0 2.2 1.6 202 chr3R 10192287 intron Syn + chr3R 10192388 intron Syn + chr3R 10192489 intron Syn + chr3R_5_10190001 chr3R_10190001 RAL-810 1479 chr3R 10231795 10231814 chr3R 10237372 10237391 mdg3 4 5577 1.0 3.0 2.0 1.3 5596 chr3R 10231795 intron CG42795 + chr3R 10234593 intron CG42795 + chr3R 10237391 intron CG42795 + chr3R_4_10230001 chr3R_10230001 RAL-810 1480 chr3R 10255376 10255382 chr3R 10260816 10260822 I-element 4 5440 6.0 4.0 5.0 0.7 5446 chr3R 10255376 exon Sirt6 - chr3R 10258099 intron Sirt6 - chr3R 10260822 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 RAL-810 1481 chr3R 10275559 10275583 chr3R 10275635 10275660 13 77 4.0 4.0 4.0 2.6 101 chr3R 10275559 intron CG43143 + chr3R 10275610 intron CG43143 + chr3R 10275660 intron CG43143 + chr3R_13_10275001 chr3R_10275001 RAL-810 1482 chr3R 10531875 10531899 chr3R 10531955 10531979 10 81 1.0 0.5 0.8 5.6 104 chr3R 10531875 intron hth - chr3R 10531927 intron hth - chr3R 10531979 intron hth - chr3R_10_10530001 chr3R_10530001 RAL-810 1483 chr3R 10563459 10563489 chr3R 10563557 10563587 9 97 1.0 2.5 1.8 3.2 128 chr3R 10563459 intron hth - chr3R 10563523 intron hth - chr3R 10563587 intron hth - chr3R_9_10560001 chr3R_10560001 RAL-810 1484 chr3R 10720560 10720588 chr3R 10720651 10720679 7 91 3.0 4.0 3.5 1.6 119 chr3R 10720560 intergenic not near genes chr3R 10720620 intergenic not near genes chr3R 10720679 intergenic not near genes chr3R_7_10720001 chr3R_10720001 RAL-810 1485 chr3R 10785817 10785840 chr3R 10785889 10785919 13 78 6.0 1.5 3.8 2.7 102 chr3R 10785817 intron Rbp1 + chr3R 10785868 intron Rbp1 + chr3R 10785919 intron Rbp1 + chr3R_13_10785001 chr3R_10785001 RAL-810 1486 chr3R 10804172 10804191 chr3R 10811702 10811723 17.6 7 7532 3.5 4.5 4.0 1.4 7551 chr3R 10804172 intergenic CG14692 - chr3R 10807948 intergenic not near genes chr3R 10811723 3` UTR CG14693 - chr3R_7_10805001 chr3R_10805001 RAL-810 1487 chr3R 10886883 10886905 chr3R 10886963 10886985 6 80 2.5 1.5 2.0 2.0 102 chr3R 10886883 intron Leash + chr3R 10886934 intron Leash + chr3R 10886985 intron Leash + chr3R_6_10885001 chr3R_10885001 RAL-810 1488 chr3R 10919686 10919716 chr3R 10919764 10919794 5 78 1.0 3.0 2.0 1.7 108 chr3R 10919686 intergenic not near genes chr3R 10919740 intergenic not near genes chr3R 10919794 intergenic not near genes chr3R_5_10915001 chr3R_10915001 RAL-810 1489 chr3R 10920043 10920075 chr3R 10920121 10920153 8 78 3.0 1.0 2.0 2.7 110 chr3R 10920043 intergenic not near genes chr3R 10920098 intergenic not near genes chr3R 10920153 intergenic not near genes chr3R_8_10920001 chr3R_10920001 RAL-810 1490 chr3R 10979272 10979304 chr3R 10979354 10979386 11 81 0.5 3.0 1.8 3.9 114 chr3R 10979272 intron CG34114 + chr3R 10979329 intron CG34114 + chr3R 10979386 intron CG34114 + chr3R_11_10975001 chr3R_10975001 RAL-810 1491 chr3R 11059676 11059706 chr3R 11059757 11059788 15 82 1.0 3.5 2.2 4.7 112 chr3R 11059676 intergenic not near genes chr3R 11059732 intergenic not near genes chr3R 11059788 intergenic not near genes chr3R_15_11055001 chr3R_11055001 RAL-810 1492 chr3R 11104966 11104999 chr3R 11105052 11105082 9 86 2.5 2.0 2.2 2.8 116 chr3R 11104966 intergenic not near genes chr3R 11105024 intergenic not near genes chr3R 11105082 intergenic not near genes chr3R_9_11105001 chr3R_11105001 RAL-810 1493 chr3R 11242251 11242278 chr3R 11242338 11242367 11 88 3.5 3.5 3.5 2.4 116 chr3R 11242251 3` UTR CG17734 - chr3R 11242309 3` UTR CG17734 - chr3R 11242367 3` UTR CG17734 - chr3R_11_11240001 chr3R_11240001 RAL-810 1494 chr3R 11261231 11261247 chr3R 11261327 11261338 10 95 1.0 2.5 1.8 3.6 107 chr3R 11261231 intergenic not near genes chr3R 11261284 intergenic not near genes chr3R 11261338 intergenic not near genes chr3R_10_11260001 chr3R_11260001 RAL-810 1495 chr3R 11269447 11269477 chr3R 11269572 11269602 13 125 2.5 3.0 2.8 3.4 155 chr3R 11269447 3` UTR CR31386 - chr3R 11269524 3` UTR CR31386 - chr3R 11269602 3` UTR CR31386 - chr3R_13_11265001 chr3R_11265001 RAL-810 1496 chr3R 11342541 11342571 chr3R 11342617 11342647 6 76 2.0 1.5 1.8 2.1 106 chr3R 11342541 intron pros + chr3R 11342594 intron pros + chr3R 11342647 intron pros + chr3R_6_11340001 chr3R_11340001 RAL-810 1497 chr3R 11379234 11379267 chr3R 11388389 11388422 roo 8 9155 4.0 2.0 3.0 2.0 9188 chr3R 11379234 intron pros + chr3R 11383828 intron pros + chr3R 11388422 intron pros + chr3R_8_11380001 chr3R_11380001 RAL-810 1498 chr3R 11406288 11406318 chr3R 11406365 11406395 11 77 1.5 1.0 1.2 5.0 107 chr3R 11406288 3` UTR pros + chr3R 11406342 3` UTR pros + chr3R 11406395 3` UTR pros + chr3R_11_11405001 chr3R_11405001 RAL-810 1499 chr3R 11455579 11455602 chr3R 11455705 11455728 6 126 3.0 2.0 2.5 1.7 149 chr3R 11455579 intron,intron CG17230 +,PGRP-LB - chr3R 11455654 intron,intron CG17230 +,PGRP-LB - chr3R 11455728 intron,intron CG17230 +,PGRP-LB - chr3R_6_11455001 chr3R_11455001 RAL-810 1500 chr3R 11461269 11461296 chr3R 11461349 11461376 7 80 1.5 3.0 2.2 2.2 107 chr3R 11461269 intron CG17230 + chr3R 11461322 intron CG17230 + chr3R 11461376 intron CG17230 + chr3R_7_11460001 chr3R_11460001 RAL-810 1501 chr3R 11468924 11468952 chr3R 11469007 11469030 8 83 1.5 3.0 2.2 2.5 106 chr3R 11468924 intergenic not near genes chr3R 11468977 intergenic not near genes chr3R 11469030 intergenic not near genes chr3R_8_11465001 chr3R_11465001 RAL-810 1502 chr3R 11491606 11491627 chr3R 11491682 11491703 8 76 3.0 1.5 2.2 2.5 97 chr3R 11491606 intergenic not near genes chr3R 11491654 intergenic not near genes chr3R 11491703 intergenic not near genes chr3R_8_11490001 chr3R_11490001 RAL-810 1503 chr3R 11694725 11694742 chr3R 11694818 11694835 9 93 2.5 3.0 2.8 2.4 110 chr3R 11694725 intergenic Fer3 - chr3R 11694780 intergenic Fer3 - chr3R 11694835 intergenic not near genes chr3R_9_11690001 chr3R_11690001 RAL-810 1504 chr3R 11734161 11734190 chr3R 11734279 11734309 5 119 0.5 3.0 1.8 1.8 148 chr3R 11734161 intergenic not near genes chr3R 11734235 intergenic not near genes chr3R 11734309 intergenic not near genes chr3R_5_11730001 chr3R_11730001 RAL-810 1505 chr3R 11763931 11763945 chr3R 11764011 11764025 4 80 4.0 7.0 5.5 0.6 94 chr3R 11763931 5` UTR Lk6 - chr3R 11763978 5` UTR Lk6 - chr3R 11764025 5` UTR Lk6 - chr3R_4_11760001 chr3R_11760001 RAL-810 1506 chr3R 11841060 11841094 chr3R 11846250 11846284 BS 4 5186 3.0 2.5 2.8 1.1 5224 chr3R 11841060 intron CG6959 - chr3R 11843672 intron CG6959 - chr3R 11846284 intron CG6959 - chr3R_4_11840001 chr3R_11840001 RAL-810 1507 chr3R 11853439 11853473 chr3R 11853588 11853620 8 147 1.5 4.5 3.0 2.0 181 chr3R 11853439 intron CG6959 - chr3R 11853530 intron CG6959 - chr3R 11853620 intron CG6959 - chr3R_8_11850001 chr3R_11850001 RAL-810 1508 chr3R 11853776 11853791 chr3R 11853881 11853896 5 104 5.5 4.5 5.0 0.8 120 chr3R 11853776 intron CG6959 - chr3R 11853836 intron CG6959 - chr3R 11853896 intron CG6959 - chr3R_5_11850001 chr3R_11850001 RAL-810 1509 chr3R 11914379 11914398 chr3R 11914464 11914483 7 85 4.0 2.0 3.0 1.8 104 chr3R 11914379 intron Cad87A - chr3R 11914431 intron Cad87A - chr3R 11914483 intron Cad87A - chr3R_7_11910001 chr3R_11910001 RAL-810 1510 chr3R 11916426 11916460 chr3R 11916504 11916539 10 77 3.0 2.0 2.5 2.9 113 chr3R 11916426 intron Cad87A - chr3R 11916482 intron Cad87A - chr3R 11916539 intron Cad87A - chr3R_10_11915001 chr3R_11915001 RAL-810 1511 chr3R 11930237 11930269 chr3R 11930320 11930353 8 83 1.0 2.5 1.8 2.9 116 chr3R 11930237 intron Cad87A - chr3R 11930295 intron Cad87A - chr3R 11930353 intron Cad87A - chr3R_8_11930001 chr3R_11930001 RAL-810 1512 chr3R 11945386 11945405 chr3R 11945484 11945503 7 98 3.0 3.0 3.0 1.8 117 chr3R 11945386 intron Cad87A - chr3R 11945444 intron Cad87A - chr3R 11945503 intron Cad87A - chr3R_7_11945001 chr3R_11945001 RAL-810 1513 chr3R 12022883 12022913 chr3R 12025060 12025090 pogo 6 2177 1.5 1.5 1.5 2.4 2207 chr3R 12022883 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025090 intergenic not near genes chr3R_6_12020001 chr3R_12020001 RAL-810 1514 chr3R 12045175 12045197 chr3R 12045251 12045273 7 76 3.5 2.5 3.0 1.8 98 chr3R 12045175 intergenic not near genes chr3R 12045224 intergenic not near genes chr3R 12045273 intergenic not near genes chr3R_7_12045001 chr3R_12045001 RAL-810 1515 chr3R 12134897 12134909 chr3R 12135023 12135038 5 128 4.5 1.5 3.0 1.2 141 chr3R 12134897 intergenic not near genes chr3R 12134968 intergenic not near genes chr3R 12135038 intergenic not near genes chr3R_5_12130001 chr3R_12130001 RAL-810 1516 chr3R 12247146 12247170 chr3R 12247231 12247255 7 85 3.0 4.0 3.5 1.6 109 chr3R 12247146 intergenic not near genes chr3R 12247200 intergenic not near genes chr3R 12247255 intergenic not near genes chr3R_7_12245001 chr3R_12245001 RAL-810 1517 chr3R 12253900 12253927 chr3R 12253983 12254010 5 83 1.0 2.0 1.5 2.0 110 chr3R 12253900 intergenic CG3942 + chr3R 12253955 intergenic CG3942 + chr3R 12254010 intergenic CG3942 + chr3R_5_12250001 chr3R_12250001 RAL-810 1518 chr3R 12267856 12267880 chr3R 12267936 12267960 9 80 2.5 1.0 1.8 3.2 104 chr3R 12267856 intron svp + chr3R 12267908 intron svp + chr3R 12267960 intron svp + chr3R_9_12265001 chr3R_12265001 RAL-810 1519 chr3R 12344130 12344155 chr3R 12344206 12344231 4 76 2.5 1.0 1.8 1.4 101 chr3R 12344130 intergenic not near genes chr3R 12344180 intergenic not near genes chr3R 12344231 intergenic not near genes chr3R_4_12340001 chr3R_12340001 RAL-810 1520 chr3R 12599374 12599401 chr3R 12599457 12599481 8 82 2.5 3.0 2.8 2.1 107 chr3R 12599374 intergenic not near genes chr3R 12599428 intergenic not near genes chr3R 12599481 intergenic not near genes chr3R_8_12595001 chr3R_12595001 RAL-810 1521 chr3R 12635047 12635074 chr3R 12635129 12635156 9 80 2.0 2.0 2.0 3.0 109 chr3R 12635047 exon CG11598 + chr3R 12635102 exon CG11598 + chr3R 12635156 exon CG11598 + chr3R_9_12635001 chr3R_12635001 RAL-810 1522 chr3R 12781845 12781878 chr3R 12781948 12781981 10 103 1.0 2.5 1.8 3.6 136 chr3R 12781845 intron beat-Vc - chr3R 12781913 intron beat-Vc - chr3R 12781981 intron beat-Vc - chr3R_10_12780001 chr3R_12780001 RAL-810 1523 chr3R 12787953 12787956 chr3R 12788036 12788039 4 83 3.0 5.0 4.0 0.8 86 chr3R 12787953 intergenic not near genes chr3R 12787996 intergenic not near genes chr3R 12788039 intergenic not near genes chr3R_4_12785001 chr3R_12785001 RAL-810 1524 chr3R 12814241 12814266 chr3R 12814316 12814343 5 77 3.5 2.5 3.0 1.2 102 chr3R 12814241 intron CG31345 - chr3R 12814292 intron CG31345 - chr3R 12814343 intron CG31345 - chr3R_5_12810001 chr3R_12810001 RAL-810 1525 chr3R 12864561 12864595 chr3R 12865046 12865080 roo 4 485 2.5 1.5 2.0 1.3 519 chr3R 12864561 intergenic not near genes chr3R 12864820 intergenic not near genes chr3R 12865080 intergenic not near genes chr3R_4_12860001 chr3R_12860001 RAL-810 1526 chr3R 12866491 12866515 chr3R 12866642 12866666 5 151 2.0 3.0 2.5 1.4 175 chr3R 12866491 intergenic not near genes chr3R 12866578 intergenic not near genes chr3R 12866666 intergenic not near genes chr3R_5_12865001 chr3R_12865001 RAL-810 1527 chr3R 12876952 12876987 chr3R 12877034 12877070 7 83 2.5 2.5 2.5 2.0 118 chr3R 12876952 intergenic not near genes chr3R 12877011 intergenic not near genes chr3R 12877070 intergenic not near genes chr3R_7_12875001 chr3R_12875001 RAL-810 1528 chr3R 12888300 12888330 chr3R 12888388 12888418 11 88 1.5 3.0 2.2 3.4 118 chr3R 12888300 intergenic not near genes chr3R 12888359 intergenic not near genes chr3R 12888418 intergenic not near genes chr3R_11_12885001 chr3R_12885001 RAL-810 1529 chr3R 12894595 12894618 chr3R 12894708 12894727 6 112 0.5 0.5 0.5 4.0 132 chr3R 12894595 intergenic not near genes chr3R 12894661 intergenic not near genes chr3R 12894727 intergenic not near genes chr3R_6_12890001 chr3R_12890001 RAL-810 1530 chr3R 12902383 12902414 chr3R 12902464 12902495 10 81 2.5 2.5 2.5 2.9 112 chr3R 12902383 intergenic not near genes chr3R 12902439 intergenic not near genes chr3R 12902495 intergenic not near genes chr3R_10_12900001 chr3R_12900001 RAL-810 1531 chr3R 12920159 12920178 chr3R 12925362 12925381 copia 5 5203 2.0 1.5 1.8 1.8 5222 chr3R 12920159 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925381 intron beat-Vb + chr3R_5_12920001 chr3R_12920001 RAL-810 1532 chr3R 12937493 12937519 chr3R 12937844 12937870 9 351 2.0 4.5 3.2 2.1 377 chr3R 12937493 intergenic not near genes chr3R 12937682 intergenic not near genes chr3R 12937870 intergenic not near genes chr3R_9_12935001 chr3R_12935001 RAL-810 1533 chr3R 12972556 12972582 chr3R 12972695 12972721 12 139 2.5 2.5 2.5 3.4 165 chr3R 12972556 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972721 intron CG7381 - chr3R_12_12970001 chr3R_12970001 RAL-810 1534 chr3R 12975331 12975354 chr3R 12975647 12975670 6 315 4.0 4.5 4.2 1.2 339 chr3R 12975331 intron CG7381 - chr3R 12975500 intron CG7381 - chr3R 12975670 intron CG7381 - chr3R_6_12975001 chr3R_12975001 RAL-810 1535 chr3R 13059963 13059977 chr3R 13060158 13060172 5 195 0.5 1.5 1.0 2.5 209 chr3R 13059963 intron sim + chr3R 13060068 intron sim + chr3R 13060172 intron sim + chr3R_5_13060001 chr3R_13060001 RAL-810 1536 chr3R 13062889 13062892 chr3R 14950314 14950316 11 1887426 12.0 8.5 10.2 1.0 1887427 chr3R 13062889 intron sim + chr3R 14006602 intron rdx - chr3R 14950316 intergenic not near genes chr3R_11_14005001 chr3R_14005001 RAL-810 1537 chr3R 13067100 13067132 chr3R 13067175 13067208 9 76 0.0 0.5 0.2 7.5 108 chr3R 13067100 intron sim + chr3R 13067154 intron sim + chr3R 13067208 intron sim + chr3R_9_13065001 chr3R_13065001 RAL-810 1538 chr3R 13143032 13143065 chr3R 13148609 13148641 mdg3 9 5571 1.5 3.0 2.2 2.8 5609 chr3R 13143032 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145836 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148641 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 RAL-810 1539 chr3R 13248650 13248679 chr3R 13248749 13248778 6 99 3.5 1.0 2.2 1.9 128 chr3R 13248650 intron Ace - chr3R 13248714 intron Ace - chr3R 13248778 intron Ace - chr3R_6_13245001 chr3R_13245001 RAL-810 1540 chr3R 13272056 13272081 chr3R 13272140 13272166 14 85 4.5 1.5 3.0 3.5 110 chr3R 13272056 intergenic CG8449 - chr3R 13272111 intergenic CG8449 - chr3R 13272166 intergenic CG8449 - chr3R_14_13270001 chr3R_13270001 RAL-810 1541 chr3R 13314099 13314127 chr3R 13318887 13318915 Doc 4 4787 5.0 3.5 4.2 0.8 4816 chr3R 13314099 intergenic not near genes chr3R 13316507 intergenic not near genes chr3R 13318915 intergenic CG45080 - chr3R_4_13315001 chr3R_13315001 RAL-810 1542 chr3R 13379135 13379151 chr3R 13379221 13379237 6 86 2.5 5.0 3.8 1.2 102 chr3R 13379135 intron CG9813 - chr3R 13379186 intron CG9813 - chr3R 13379237 intron CG9813 - chr3R_6_13375001 chr3R_13375001 RAL-810 1543 chr3R 13418668 13418674 chr3R 13418743 13418750 4 76 3.0 1.0 2.0 1.3 82 chr3R 13418668 intergenic not near genes chr3R 13418709 intergenic not near genes chr3R 13418750 intergenic not near genes chr3R_4_13415001 chr3R_13415001 RAL-810 1544 chr3R 13435393 13435420 chr3R 13435568 13435593 11 175 3.0 2.5 2.8 2.9 200 chr3R 13435393 intergenic yrt - chr3R 13435493 intergenic not near genes chr3R 13435593 intergenic not near genes chr3R_11_13435001 chr3R_13435001 RAL-810 1545 chr3R 13603058 13603077 chr3R 13603149 13603168 5 91 1.0 3.5 2.2 1.6 110 chr3R 13603058 intergenic not near genes chr3R 13603113 intergenic not near genes chr3R 13603168 intergenic not near genes chr3R_5_13600001 chr3R_13600001 RAL-810 1546 chr3R 13609560 13609581 chr3R 13609654 13609675 11 94 0.0 3.0 1.5 4.4 115 chr3R 13609560 intergenic CG9759 - chr3R 13609618 intergenic CG9759 - chr3R 13609675 intergenic CG9759 - chr3R_11_13605001 chr3R_13605001 RAL-810 1547 chr3R 13625705 13625724 chr3R 13625786 13625805 8 81 1.0 5.5 3.2 1.9 100 chr3R 13625705 intergenic not near genes chr3R 13625755 intergenic not near genes chr3R 13625805 intergenic not near genes chr3R_8_13625001 chr3R_13625001 RAL-810 1548 chr3R 13659718 13659848 chr3R 13659824 13659937 10 98 0.0 0.0 0.0 10.0 219 chr3R 13659718 intron Hrb87F - chr3R 13659828 intron Hrb87F - chr3R 13659937 intron Hrb87F - chr3R_10_13655001 chr3R_13655001 RAL-810 1549 chr3R 13693028 13693028 chr3R 21907534 21907536 9 8214507 17.5 14.5 16.0 0.5 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_9_17800001 chr3R_17800001 RAL-810 1550 chr3R 13782056 13782079 chr3R 13782137 13782160 5 79 2.0 1.0 1.5 2.0 104 chr3R 13782056 exon CG9286 + chr3R 13782108 intergenic CG9286 +,Dip-B + chr3R 13782160 intergenic CG9286 +,Dip-B + chr3R_5_13780001 chr3R_13780001 RAL-810 1551 chr3R 13863678 13863711 chr3R 13863766 13863799 8 88 2.5 3.0 2.8 2.1 121 chr3R 13863678 intergenic not near genes chr3R 13863738 intergenic not near genes chr3R 13863799 intergenic not near genes chr3R_8_13860001 chr3R_13860001 RAL-810 1552 chr3R 13925995 13926017 chr3R 13926070 13926094 4 75 2.0 3.0 2.5 1.1 99 chr3R 13925995 intergenic not near genes chr3R 13926044 intergenic not near genes chr3R 13926094 intergenic not near genes chr3R_4_13925001 chr3R_13925001 RAL-810 1553 chr3R 13941426 13941451 chr3R 13941506 13941531 7 80 3.5 3.0 3.2 1.7 105 chr3R 13941426 intergenic not near genes chr3R 13941478 intergenic not near genes chr3R 13941531 intergenic not near genes chr3R_7_13940001 chr3R_13940001 RAL-810 1554 chr3R 13994301 13994333 chr3R 13994556 13994588 15 254 2.5 2.0 2.2 4.7 287 chr3R 13994301 intron rdx - chr3R 13994444 intron rdx - chr3R 13994588 intron rdx - chr3R_15_13990001 chr3R_13990001 RAL-810 1555 chr3R 14079647 14079676 chr3R 14079945 14079974 7 298 2.5 0.0 1.2 3.2 327 chr3R 14079647 intron foxo + chr3R 14079810 intron foxo + chr3R 14079974 intron foxo + chr3R_7_14075001 chr3R_14075001 RAL-810 1556 chr3R 14117443 14117473 chr3R 14117519 14117549 9 76 5.0 6.5 5.8 1.3 106 chr3R 14117443 intron Kif19A - chr3R 14117496 intron Kif19A - chr3R 14117549 intron Kif19A - chr3R_9_14115001 chr3R_14115001 RAL-810 1557 chr3R 14170156 14170171 chr3R 14170246 14170261 6 90 2.5 3.0 2.8 1.6 105 chr3R 14170156 3` UTR Dop1R1 - chr3R 14170208 3` UTR Dop1R1 - chr3R 14170261 3` UTR Dop1R1 - chr3R_6_14170001 chr3R_14170001 RAL-810 1558 chr3R 14180813 14180837 chr3R 14185575 14185602 F-element 9 4765 3.5 3.0 3.2 2.1 4789 chr3R 14180813 intron Dop1R1 - chr3R 14183208 intron Dop1R1 - chr3R 14185602 intron Dop1R1 - chr3R_9_14180001 chr3R_14180001 RAL-810 1559 chr3R 14403206 14403238 chr3R 14403290 14403322 8 84 3.0 2.0 2.5 2.3 116 chr3R 14403206 intron cv-c - chr3R 14403264 intron cv-c - chr3R 14403322 intron cv-c - chr3R_8_14400001 chr3R_14400001 RAL-810 1560 chr3R 14424574 14424602 chr3R 14424679 14424707 7 102 1.5 1.0 1.2 3.2 133 chr3R 14424574 intron cv-c - chr3R 14424640 intron cv-c - chr3R 14424707 intron cv-c - chr3R_7_14420001 chr3R_14420001 RAL-810 1561 chr3R 14472637 14472664 chr3R 14472733 14472760 11 96 2.0 3.0 2.5 3.1 123 chr3R 14472637 intron cv-c - chr3R 14472698 intron cv-c - chr3R 14472760 intron cv-c - chr3R_11_14470001 chr3R_14470001 RAL-810 1562 chr3R 14771694 14771710 chr3R 14772245 14772261 4 551 26.5 19.5 23.0 0.2 567 chr3R 14771694 intron jvl + chr3R 14771978 intron jvl + chr3R 14772261 intron jvl + chr3R_4_14770001 chr3R_14770001 RAL-810 1563 chr3R 14866892 14866920 chr3R 14866971 14866999 11 77 2.0 3.0 2.5 3.1 107 chr3R 14866892 intron btsz - chr3R 14866946 intron btsz - chr3R 14866999 intron btsz - chr3R_11_14865001 chr3R_14865001 RAL-810 1564 chr3R 14923729 14923740 chr3R 14923803 14923816 4 76 1.5 7.5 4.5 0.7 87 chr3R 14923729 3` UTR CR45598 - chr3R 14923772 intergenic CR45598 - chr3R 14923816 intergenic CR45598 - chr3R_4_14920001 chr3R_14920001 RAL-810 1565 chr3R 14926928 14926957 chr3R 14927009 14927038 5 81 3.0 0.0 1.5 2.0 110 chr3R 14926928 intergenic not near genes chr3R 14926983 intergenic not near genes chr3R 14927038 intergenic not near genes chr3R_5_14925001 chr3R_14925001 RAL-810 1566 chr3R 14978194 14978219 chr3R 14978316 14978326 4 120 0.5 2.0 1.2 1.8 132 chr3R 14978194 intergenic not near genes chr3R 14978260 intergenic not near genes chr3R 14978326 intergenic not near genes chr3R_4_14975001 chr3R_14975001 RAL-810 1567 chr3R 15032727 15032760 chr3R 15032805 15032839 7 79 2.0 1.5 1.8 2.5 112 chr3R 15032727 intergenic not near genes chr3R 15032783 intergenic not near genes chr3R 15032839 intergenic not near genes chr3R_7_15030001 chr3R_15030001 RAL-810 1568 chr3R 15059466 15059477 chr3R 15059552 15059564 5 87 0.0 3.5 1.8 1.8 98 chr3R 15059466 intron dpr9 - chr3R 15059515 intron dpr9 - chr3R 15059564 intron dpr9 - chr3R_5_15055001 chr3R_15055001 RAL-810 1569 chr3R 15079807 15079837 chr3R 15080048 15080078 pogo 9 241 3.5 0.5 2.0 3.0 271 chr3R 15079807 3` UTR CG6966 - chr3R 15079942 3` UTR CG6966 - chr3R 15080078 3` UTR CG6966 - chr3R_9_15075001 chr3R_15075001 RAL-810 1570 chr3R 15102496 15102525 chr3R 15109751 15109780 412 7 7258 3.0 4.5 3.8 1.5 7284 chr3R 15102496 intron CG42788 - chr3R 15106138 intron CG42788 - chr3R 15109780 intron CG42788 - chr3R_7_15105001 chr3R_15105001 RAL-810 1571 chr3R 15114915 15114942 chr3R 15114991 15115019 5 76 2.5 2.0 2.2 1.6 104 chr3R 15114915 intron CG42788 - chr3R 15114967 intron CG42788 - chr3R 15115019 intron CG42788 - chr3R_5_15110001 chr3R_15110001 RAL-810 1572 chr3R 15132062 15132081 chr3R 15135121 15135141 Juan 8 3060 5.0 12.0 8.5 0.8 3079 chr3R 15132062 intergenic CG42788 - chr3R 15133602 intergenic not near genes chr3R 15135141 3` UTR CG6912 - chr3R_8_15130001 chr3R_15130001 RAL-810 1573 chr3R 15130866 15130884 chr3R 15141227 15141245 4 10361 13.5 19.5 16.5 0.2 10379 chr3R 15130866 intron CG42788 - chr3R 15136056 exon CG6912 - chr3R 15141245 exon CG3987 + chr3R_4_15135001 chr3R_15135001 RAL-810 1574 chr3R 15162549 15162574 chr3R 15167316 15167340 F-element 10 4767 4.5 2.5 3.5 2.2 4791 chr3R 15162549 intron Gyc88E + chr3R 15164944 intron Gyc88E + chr3R 15167340 intron Gyc88E + chr3R_10_15160001 chr3R_15160001 RAL-810 1575 chr3R 15199888 15199903 chr3R 15199963 15199980 6 76 2.0 0.0 1.0 3.0 92 chr3R 15199888 intron CG42542 + chr3R 15199934 intron CG42542 + chr3R 15199980 intron CG42542 + chr3R_6_15195001 chr3R_15195001 RAL-810 1576 chr3R 15278827 15278857 chr3R 15278914 15278942 7 86 1.5 2.0 1.8 2.5 115 chr3R 15278827 intergenic l(3)neo43 - chr3R 15278884 intergenic l(3)neo43 - chr3R 15278942 intergenic l(3)neo43 - chr3R_7_15275001 chr3R_15275001 RAL-810 1577 chr3R 15286987 15286988 chr3R 21907534 21907534 4 6620548 9.5 14.5 12.0 0.3 6620547 chr3R 15286987 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907534 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 RAL-810 1578 chr3R 15401270 15401284 chr3R 15406173 15406187 5 4903 18.5 30.5 24.5 0.2 4917 chr3R 15401270 3` UTR Rbp + chr3R 15403728 exon CG6125 - chr3R 15406187 intron CG6125 - chr3R_5_15400001 chr3R_15400001 RAL-810 1579 chr3R 15416255 15416281 chr3R 15416335 15416361 7 80 3.0 2.5 2.8 1.8 106 chr3R 15416255 3` UTR Atx2 + chr3R 15416308 3` UTR Atx2 + chr3R 15416361 3` UTR Atx2 + chr3R_7_15415001 chr3R_15415001 RAL-810 1580 chr3R 15521960 15521983 chr3R 15522051 15522074 6 90 3.0 3.0 3.0 1.5 114 chr3R 15521960 intergenic not near genes chr3R 15522017 intergenic not near genes chr3R 15522074 intergenic not near genes chr3R_6_15520001 chr3R_15520001 RAL-810 1581 chr3R 15594655 15594676 chr3R 15594736 15594759 8 82 0.0 1.5 0.8 4.4 104 chr3R 15594655 intergenic not near genes chr3R 15594707 intergenic not near genes chr3R 15594759 intergenic not near genes chr3R_8_15590001 chr3R_15590001 RAL-810 1582 chr3R 15601166 15601195 chr3R 15608688 15608700 412 10 7519 2.5 2.0 2.2 3.1 7534 chr3R 15601166 intergenic not near genes chr3R 15604933 intergenic not near genes chr3R 15608700 intergenic not near genes chr3R_10_15600001 chr3R_15600001 RAL-810 1583 chr3R 15646793 15646796 chr3R 15646876 15646879 5 83 0.0 2.5 1.2 2.3 86 chr3R 15646793 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646879 intergenic not near genes chr3R_5_15645001 chr3R_15645001 RAL-810 1584 chr3R 15691180 15691317 chr3R 15691285 15691404 8 96 0.0 0.0 0.0 8.0 224 chr3R 15691180 intergenic not near genes chr3R 15691292 intergenic not near genes chr3R 15691404 intergenic not near genes chr3R_8_15690001 chr3R_15690001 RAL-810 1585 chr3R 15765135 15765162 chr3R 15765300 15765327 8 164 3.0 2.5 2.8 2.1 192 chr3R 15765135 intergenic not near genes chr3R 15765231 intergenic not near genes chr3R 15765327 intergenic not near genes chr3R_8_15765001 chr3R_15765001 RAL-810 1586 chr3R 15773920 15773945 chr3R 15775222 15775248 7 1303 2.0 24.0 13.0 0.5 1328 chr3R 15773920 intergenic CR45206 -,CG4525 + chr3R 15774584 3` UTR,exon CR45206 -,CG4525 + chr3R 15775248 intron,3` UTR CG4525 +,CR45207 - chr3R_7_15770001 chr3R_15770001 RAL-810 1587 chr3R 15779653 15779679 chr3R 15779734 15779760 6 81 2.0 3.0 2.5 1.7 107 chr3R 15779653 intergenic CG5614 + chr3R 15779706 intergenic CG5614 + chr3R 15779760 intergenic CG5614 + chr3R_6_15775001 chr3R_15775001 RAL-810 1588 chr3R 15783736 15783760 chr3R 15784016 15784040 7 280 2.0 3.0 2.5 2.0 304 chr3R 15783736 intergenic not near genes chr3R 15783888 intergenic not near genes chr3R 15784040 intergenic not near genes chr3R_7_15780001 chr3R_15780001 RAL-810 1589 chr3R 15844111 15844135 chr3R 15844209 15844233 8 98 2.0 2.5 2.2 2.5 122 chr3R 15844111 3` UTR spn-E + chr3R 15844172 3` UTR spn-E + chr3R 15844233 3` UTR spn-E + chr3R_8_15840001 chr3R_15840001 RAL-810 1590 chr3R 15868957 15868972 chr3R 15869035 15869050 5 78 0.0 0.0 0.0 5.0 93 chr3R 15868957 intron CG31183 - chr3R 15869004 intron CG31183 - chr3R 15869050 intron CG31183 - chr3R_5_15865001 chr3R_15865001 RAL-810 1591 chr3R 15872608 15872636 chr3R 15872896 15872922 6 282 3.0 1.0 2.0 2.0 314 chr3R 15872608 intron CG31183 - chr3R 15872765 intron CG31183 - chr3R 15872922 intron CG31183 - chr3R_6_15870001 chr3R_15870001 RAL-810 1592 chr3R 15948650 15948682 chr3R 15948737 15948769 7 87 3.0 2.0 2.5 2.0 119 chr3R 15948650 intron Sap47 + chr3R 15948710 intron Sap47 + chr3R 15948769 intron Sap47 + chr3R_7_15945001 chr3R_15945001 RAL-810 1593 chr3R 16033419 16033439 chr3R 16033500 16033520 5 81 3.5 4.5 4.0 1.0 101 chr3R 16033419 intron pnr + chr3R 16033470 intron pnr + chr3R 16033520 intron pnr + chr3R_5_16030001 chr3R_16030001 RAL-810 1594 chr3R 16189411 16189443 chr3R 16189814 16189846 invader4 6 403 5.0 0.5 2.8 1.6 435 chr3R 16189411 intron sra + chr3R 16189628 intron sra + chr3R 16189846 intron sra + chr3R_6_16185001 chr3R_16185001 RAL-810 1595 chr3R 16225088 16225118 chr3R 16225173 16225203 8 85 1.0 2.5 1.8 2.9 115 chr3R 16225088 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225203 intergenic tara + chr3R_8_16225001 chr3R_16225001 RAL-810 1596 chr3R 16241787 16241817 chr3R 16242050 16242080 18 263 5.0 8.5 6.8 2.3 293 chr3R 16241787 intron tara + chr3R 16241934 intron tara + chr3R 16242080 intron tara + chr3R_18_16240001 chr3R_16240001 RAL-810 1597 chr3R 16246523 16246551 chr3R 16246599 16246627 6 76 0.0 2.0 1.0 3.0 104 chr3R 16246523 intron tara + chr3R 16246575 intron tara + chr3R 16246627 intron tara + chr3R_6_16245001 chr3R_16245001 RAL-810 1598 chr3R 16260837 16260843 chr3R 16260917 16260923 5 80 0.5 3.5 2.0 1.7 86 chr3R 16260837 intergenic not near genes chr3R 16260880 intergenic bor - chr3R 16260923 intergenic bor - chr3R_5_16260001 chr3R_16260001 RAL-810 1599 chr3R 16472579 16472597 chr3R 16472655 16472673 4 76 5.5 2.0 3.8 0.8 94 chr3R 16472579 intergenic Gyc-89Da + chr3R 16472626 5` UTR Gyc-89Da + chr3R 16472673 5` UTR Gyc-89Da + chr3R_4_16470001 chr3R_16470001 RAL-810 1600 chr3R 16520722 16520746 chr3R 16520804 16520828 6 77 2.0 1.0 1.5 2.4 106 chr3R 16520722 intron CG42342 + chr3R 16520775 intron CG42342 + chr3R 16520828 intron CG42342 + chr3R_6_16520001 chr3R_16520001 RAL-810 1601 chr3R 16756328 16756344 chr3R 16762517 16762535 diver 5 6188 2.0 3.5 2.8 1.3 6207 chr3R 16756328 intron bxd - chr3R 16759432 intron bxd - chr3R 16762535 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-810 1602 chr3R 16782022 16782042 chr3R 16782094 16782123 6 77 1.5 1.5 1.5 2.4 101 chr3R 16782022 intergenic not near genes chr3R 16782072 intergenic not near genes chr3R 16782123 intergenic not near genes chr3R_6_16780001 chr3R_16780001 RAL-810 1603 chr3R 16795288 16795321 chr3R 16795378 16795411 8 90 2.5 4.0 3.2 1.9 123 chr3R 16795288 intergenic not near genes chr3R 16795350 intergenic not near genes chr3R 16795411 intergenic not near genes chr3R_8_16795001 chr3R_16795001 RAL-810 1604 chr3R 16816322 16816346 chr3R 16816494 16816517 4 172 3.0 1.0 2.0 1.3 195 chr3R 16816322 intron abd-A - chr3R 16816420 intron abd-A - chr3R 16816517 intron abd-A - chr3R_4_16815001 chr3R_16815001 RAL-810 1605 chr3R 16820262 16820269 chr3R 16820356 16820363 5 94 3.5 1.5 2.5 1.4 101 chr3R 16820262 intron abd-A - chr3R 16820312 intron abd-A - chr3R 16820363 intron abd-A - chr3R_5_16820001 chr3R_16820001 RAL-810 1606 chr3R 16836964 16836981 chr3R 16837293 16837310 4 329 1.5 1.5 1.5 1.6 346 chr3R 16836964 intron iab-8 - chr3R 16837137 intron iab-8 - chr3R 16837310 intron iab-8 - chr3R_4_16835001 chr3R_16835001 RAL-810 1607 chr3R 17059629 17059653 chr3R 17059704 17059733 11 79 4.0 3.5 3.8 2.3 104 chr3R 17059629 intron Dad + chr3R 17059681 intron Dad + chr3R 17059733 intron Dad + chr3R_11_17055001 chr3R_17055001 RAL-810 1608 chr3R 17250236 17250266 chr3R 17250375 17250405 7 139 2.0 3.0 2.5 2.0 169 chr3R 17250236 intron beat-IIb - chr3R 17250320 intron beat-IIb - chr3R 17250405 intron beat-IIb - chr3R_7_17250001 chr3R_17250001 RAL-810 1609 chr3R 17268673 17268702 chr3R 17268795 17268824 7 122 1.5 4.0 2.8 1.8 151 chr3R 17268673 intergenic not near genes chr3R 17268748 intergenic not near genes chr3R 17268824 intergenic not near genes chr3R_7_17265001 chr3R_17265001 RAL-810 1610 chr3R 17271448 17271476 chr3R 17272342 17272371 5 894 0.0 2.5 1.2 2.3 923 chr3R 17271448 intergenic CR44258 - chr3R 17271910 intergenic not near genes chr3R 17272371 intergenic not near genes chr3R_5_17270001 chr3R_17270001 RAL-810 1611 chr3R 17294668 17294701 chr3R 17295096 17295129 BS 8 425 3.0 0.5 1.8 2.9 461 chr3R 17294668 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295129 intergenic not near genes chr3R_8_17290001 chr3R_17290001 RAL-810 1612 chr3R 17335164 17335187 chr3R 17335240 17335261 5 75 0.5 2.0 1.2 2.3 97 chr3R 17335164 intron beat-IIa - chr3R 17335212 intron beat-IIa - chr3R 17335261 intron beat-IIa - chr3R_5_17335001 chr3R_17335001 RAL-810 1613 chr3R 17346691 17346718 chr3R 17348254 17348281 F-element 8 1563 5.5 3.0 4.2 1.5 1590 chr3R 17346691 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348281 intron beat-IIa - chr3R_8_17345001 chr3R_17345001 RAL-810 1614 chr3R 17355267 17355275 chr3R 17355617 17355625 4 350 1.5 3.5 2.5 1.1 358 chr3R 17355267 intron beat-IIa - chr3R 17355446 intron beat-IIa - chr3R 17355625 intron beat-IIa - chr3R_4_17355001 chr3R_17355001 RAL-810 1615 chr3R 17384028 17384047 chr3R 17384499 17384517 10 471 3.0 4.0 3.5 2.2 489 chr3R 17384028 intron,intron Brf -,lute + chr3R 17384272 intron,intron Brf -,lute + chr3R 17384517 intron,intron Brf -,lute + chr3R_10_17380001 chr3R_17380001 RAL-810 1616 chr3R 17461209 17461230 chr3R 17461291 17461312 4 82 1.0 2.5 1.8 1.4 103 chr3R 17461209 intergenic not near genes chr3R 17461260 intergenic not near genes chr3R 17461312 intergenic not near genes chr3R_4_17460001 chr3R_17460001 RAL-810 1617 chr3R 17571579 17571597 chr3R 17571659 17571678 7 81 3.5 4.0 3.8 1.5 99 chr3R 17571579 intergenic not near genes chr3R 17571628 intergenic not near genes chr3R 17571678 intergenic not near genes chr3R_7_17570001 chr3R_17570001 RAL-810 1618 chr3R 17591286 17591312 chr3R 17591722 17591741 F-element 8 434 4.5 2.0 3.2 1.9 455 chr3R 17591286 intergenic not near genes chr3R 17591514 intergenic not near genes chr3R 17591741 intergenic not near genes chr3R_8_17590001 chr3R_17590001 RAL-810 1619 chr3R 17591314 17591323 chr3R 17591721 17591759 F-element 5 424 4.0 2.0 3.0 1.2 445 chr3R 17591314 intergenic not near genes chr3R 17591536 intergenic not near genes chr3R 17591759 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-810 1620 chr3R 17638315 17638330 chr3R 17638801 17638816 roo 8 486 0.0 0.5 0.2 6.7 501 chr3R 17638315 intron CG43175 + chr3R 17638566 intron CG43175 + chr3R 17638816 intron,intron CG43175 +,CR45222 + chr3R_8_17635001 chr3R_17635001 RAL-810 1621 chr3R 17653105 17653112 chr3R 17653195 17653201 4 89 1.0 8.5 4.8 0.7 96 chr3R 17653105 intron,intron CG14322 +,CR45223 - chr3R 17653153 intron,intron CG14322 +,CR45223 - chr3R 17653201 intron,intron CG14322 +,CR45223 - chr3R_4_17650001 chr3R_17650001 RAL-810 1622 chr3R 17657652 17657662 chr3R 17657803 17657813 INE-1 6 151 0.0 5.0 2.5 1.7 161 chr3R 17657652 intron CG14322 + chr3R 17657732 intron CG14322 + chr3R 17657813 intron CG14322 + chr3R_6_17655001 chr3R_17655001 RAL-810 1623 chr3R 17678586 17678615 chr3R 17678973 17679002 6 387 1.5 2.0 1.8 2.1 416 chr3R 17678586 intron alt - chr3R 17678794 intron alt - chr3R 17679002 intron alt - chr3R_6_17675001 chr3R_17675001 RAL-810 1624 chr3R 17734848 17734858 chr3R 17734962 17734972 4 114 5.5 5.5 5.5 0.6 124 chr3R 17734848 intergenic CG14321 + chr3R 17734910 intergenic not near genes chr3R 17734972 intergenic not near genes chr3R_4_17730001 chr3R_17730001 RAL-810 1625 chr3R 17748370 17748389 chr3R 17748518 17748542 7 152 1.5 1.5 1.5 2.8 172 chr3R 17748370 intergenic not near genes chr3R 17748456 intergenic not near genes chr3R 17748542 intergenic not near genes chr3R_7_17745001 chr3R_17745001 RAL-810 1626 chr3R 17823217 17823232 chr3R 17823302 17823317 6 85 2.0 4.5 3.2 1.4 100 chr3R 17823217 intron tinc + chr3R 17823267 intron tinc + chr3R 17823317 intron tinc + chr3R_6_17820001 chr3R_17820001 RAL-810 1627 chr3R 17845206 17845218 chr3R 17845283 17845295 4 76 2.5 4.0 3.2 1.0 89 chr3R 17845206 intron tinc + chr3R 17845250 intron tinc + chr3R 17845295 intron tinc + chr3R_4_17845001 chr3R_17845001 RAL-810 1628 chr3R 17859385 17859399 chr3R 17859464 17859468 4 76 3.0 3.5 3.2 1.0 83 chr3R 17859385 intron tinc + chr3R 17859426 intron tinc + chr3R 17859468 intron tinc + chr3R_4_17855001 chr3R_17855001 RAL-810 1629 chr3R 17899090 17899108 chr3R 17899168 17899186 5 78 8.0 3.5 5.8 0.7 96 chr3R 17899090 intron Rim - chr3R 17899138 intron Rim - chr3R 17899186 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-810 1630 chr3R 17925852 17925889 chr3R 17927318 17927356 hobo 8 1464 1.5 2.5 2.0 2.7 1504 chr3R 17925852 intron cpo + chr3R 17926604 intron cpo + chr3R 17927356 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-810 1631 chr3R 17960695 17960714 chr3R 17960879 17960879 6 181 1.5 1.0 1.2 2.7 184 chr3R 17960695 intron cpo + chr3R 17960787 intron cpo + chr3R 17960879 intron cpo + chr3R_6_17960001 chr3R_17960001 RAL-810 1632 chr3R 18061582 18061608 chr3R 18063149 18063176 F-element 9 1567 4.5 1.0 2.8 2.4 1594 chr3R 18061582 intergenic not near genes chr3R 18062379 intergenic not near genes chr3R 18063176 intergenic not near genes chr3R_9_18060001 chr3R_18060001 RAL-810 1633 chr3R 18068000 18068025 chr3R 18068082 18068107 7 82 0.0 4.0 2.0 2.3 107 chr3R 18068000 intergenic not near genes chr3R 18068054 intergenic not near genes chr3R 18068107 intergenic not near genes chr3R_7_18065001 chr3R_18065001 RAL-810 1634 chr3R 18331783 18331796 chr3R 18333277 18333277 hopper2 5 1491 8.0 6.5 7.2 0.6 1494 chr3R 18331783 3` UTR CG15803 - chr3R 18332530 intron CG15803 - chr3R 18333277 3` UTR CG15803 - chr3R_5_18330001 chr3R_18330001 RAL-810 1635 chr3R 18473236 18473253 chr3R 18473323 18473339 4 87 0.0 0.0 0.0 4.0 103 chr3R 18473236 intron fru - chr3R 18473288 intron fru - chr3R 18473339 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-810 1636 chr3R 18501594 18501629 chr3R 18501675 18501710 10 81 2.5 5.0 3.8 2.1 116 chr3R 18501594 intron fru - chr3R 18501652 intron fru - chr3R 18501710 intron fru - chr3R_10_18500001 chr3R_18500001 RAL-810 1637 chr3R 18528374 18528401 chr3R 18528460 18528488 11 86 1.0 1.0 1.0 5.5 114 chr3R 18528374 intron fru - chr3R 18528431 intron fru - chr3R 18528488 intron fru - chr3R_11_18525001 chr3R_18525001 RAL-810 1638 chr3R 18579580 18579587 chr3R 18579657 18579664 4 77 4.5 0.0 2.2 1.2 84 chr3R 18579580 intron,intron CG7694 +,fray + chr3R 18579622 intron,intron CG7694 +,fray + chr3R 18579664 intron,intron CG7694 +,fray + chr3R_4_18575001 chr3R_18575001 RAL-810 1639 chr3R 18606501 18606532 chr3R 18610733 18610764 F-element 12 4232 2.5 2.0 2.2 3.8 4263 chr3R 18606501 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610764 intron,intron qin +,CG14304 - chr3R_12_18605001 chr3R_18605001 RAL-810 1640 chr3R 18622778 18622806 chr3R 18622854 18622882 12 75 1.0 0.5 0.8 6.7 104 chr3R 18622778 intron qin + chr3R 18622830 intron qin + chr3R 18622882 intron qin + chr3R_12_18620001 chr3R_18620001 RAL-810 1641 chr3R 18697384 18697551 chr3R 18697464 18697716 9 155 3.0 4.0 3.5 2.0 332 chr3R 18697384 intergenic not near genes chr3R 18697550 intergenic not near genes chr3R 18697716 intergenic not near genes chr3R_9_18695001 chr3R_18695001 RAL-810 1642 chr3R 18703288 18703313 chr3R 18703396 18703419 7 108 3.0 0.0 1.5 2.8 131 chr3R 18703288 intergenic not near genes chr3R 18703354 intergenic not near genes chr3R 18703419 intergenic not near genes chr3R_7_18700001 chr3R_18700001 RAL-810 1643 chr3R 18792803 18792820 chr3R 18792886 18792903 4 83 6.0 0.5 3.2 1.0 100 chr3R 18792803 intron CG7720 - chr3R 18792853 intron CG7720 - chr3R 18792903 intron CG7720 - chr3R_4_18790001 chr3R_18790001 RAL-810 1644 chr3R 18802128 18802150 chr3R 18802213 18802234 7 84 3.5 2.5 3.0 1.8 106 chr3R 18802128 3` UTR CG18208 - chr3R 18802181 3` UTR CG18208 - chr3R 18802234 3` UTR CG18208 - chr3R_7_18800001 chr3R_18800001 RAL-810 1645 chr3R 18812076 18812109 chr3R 18812154 18812187 8 78 1.5 1.5 1.5 3.2 111 chr3R 18812076 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812187 intron CG18208 - chr3R_8_18810001 chr3R_18810001 RAL-810 1646 chr3R 18860131 18860147 chr3R 18860217 18860233 4 86 3.0 1.5 2.2 1.2 102 chr3R 18860131 intergenic not near genes chr3R 18860182 intergenic not near genes chr3R 18860233 intergenic not near genes chr3R_4_18860001 chr3R_18860001 RAL-810 1647 chr3R 18965204 18965234 chr3R 18965397 18965427 9 193 1.0 2.5 1.8 3.2 223 chr3R 18965204 intron,intron CG42613 +,CG43732 + chr3R 18965316 intron,intron CG42613 +,CG43732 + chr3R 18965427 intron,intron CG42613 +,CG43732 + chr3R_9_18965001 chr3R_18965001 RAL-810 1648 chr3R 19014091 19014122 chr3R 19014171 19014202 12 78 2.5 2.5 2.5 3.4 111 chr3R 19014091 intron gukh + chr3R 19014146 intron gukh + chr3R 19014202 intron gukh + chr3R_12_19010001 chr3R_19010001 RAL-810 1649 chr3R 19106824 19106843 chr3R 19106914 19106917 4 84 5.5 0.5 3.0 1.0 93 chr3R 19106824 intron CG6040 + chr3R 19106870 intron CG6040 + chr3R 19106917 intron CG6040 + chr3R_4_19105001 chr3R_19105001 RAL-810 1650 chr3R 19140276 19140301 chr3R 19140710 19140747 4 437 2.5 1.5 2.0 1.3 471 chr3R 19140276 3` UTR Ppcs - chr3R 19140512 3` UTR Ppcs - chr3R 19140747 3` UTR Ppcs - chr3R_4_19140001 chr3R_19140001 RAL-810 1651 chr3R 19193002 19193012 chr3R 19197279 19197316 F-element 5 4294 0.0 1.0 0.5 3.3 4314 chr3R 19193002 intron CG31475 + chr3R 19195159 intron CG31475 + chr3R 19197316 intron CG31475 + chr3R_5_19195001 chr3R_19195001 RAL-810 1652 chr3R 19276930 19276939 chr3R 19277010 19277019 4 80 2.5 1.0 1.8 1.4 89 chr3R 19276930 intergenic not near genes chr3R 19276974 intergenic not near genes chr3R 19277019 intergenic not near genes chr3R_4_19275001 chr3R_19275001 RAL-810 1653 chr3R 19290546 19290578 chr3R 19290622 19290654 8 76 2.5 3.5 3.0 2.0 108 chr3R 19290546 intergenic not near genes chr3R 19290600 intergenic not near genes chr3R 19290654 intergenic not near genes chr3R_8_19290001 chr3R_19290001 RAL-810 1654 chr3R 19340397 19340428 chr3R 19340474 19340505 9 77 2.5 1.5 2.0 3.0 108 chr3R 19340397 intergenic not near genes chr3R 19340451 intergenic not near genes chr3R 19340505 intergenic not near genes chr3R_9_19340001 chr3R_19340001 RAL-810 1655 chr3R 19418410 19418439 chr3R 19418502 19418531 6 92 2.0 1.5 1.8 2.1 121 chr3R 19418410 intron CG31221 + chr3R 19418470 intron CG31221 + chr3R 19418531 intron CG31221 + chr3R_6_19415001 chr3R_19415001 RAL-810 1656 chr3R 19435516 19435542 chr3R 19435792 19435818 11 276 3.5 2.0 2.8 2.9 302 chr3R 19435516 intron CG31221 + chr3R 19435667 intron CG31221 + chr3R 19435818 intron CG31221 + chr3R_11_19435001 chr3R_19435001 RAL-810 1657 chr3R 19453851 19453873 chr3R 19454001 19454023 9 150 0.5 2.5 1.5 3.6 172 chr3R 19453851 intron CG31221 + chr3R 19453937 intron CG31221 + chr3R 19454023 intron CG31221 + chr3R_9_19450001 chr3R_19450001 RAL-810 1658 chr3R 19502212 19502235 chr3R 19502289 19502302 7 75 1.0 2.5 1.8 2.5 90 chr3R 19502212 intron Dys + chr3R 19502257 intron Dys + chr3R 19502302 intron Dys + chr3R_7_19500001 chr3R_19500001 RAL-810 1659 chr3R 19532213 19532239 chr3R 19532288 19532314 9 75 3.0 2.0 2.5 2.6 101 chr3R 19532213 intron Dys + chr3R 19532264 intron Dys + chr3R 19532314 intron Dys + chr3R_9_19530001 chr3R_19530001 RAL-810 1660 chr3R 19602755 19602789 chr3R 19602833 19602867 10 78 3.0 3.5 3.2 2.4 112 chr3R 19602755 intergenic CG7333 + chr3R 19602811 intergenic CG7333 + chr3R 19602867 intergenic CG7333 + chr3R_10_19600001 chr3R_19600001 RAL-810 1661 chr3R 19702319 19702354 chr3R 19702401 19702435 8 82 1.5 2.0 1.8 2.9 116 chr3R 19702319 intergenic not near genes chr3R 19702377 intergenic not near genes chr3R 19702435 intergenic not near genes chr3R_8_19700001 chr3R_19700001 RAL-810 1662 chr3R 19716214 19716248 chr3R 19716291 19716325 9 76 0.0 0.0 0.0 9.0 111 chr3R 19716214 intergenic CG34286 - chr3R 19716270 intergenic CG34286 - chr3R 19716325 intergenic CG34286 - chr3R_9_19715001 chr3R_19715001 RAL-810 1663 chr3R 19824505 19824539 chr3R 19824599 19824633 8 94 2.5 1.5 2.0 2.7 128 chr3R 19824505 intron bnl - chr3R 19824569 intron bnl - chr3R 19824633 intron bnl - chr3R_8_19820001 chr3R_19820001 RAL-810 1664 chr3R 19943884 19943901 chr3R 19943959 19943981 11 79 1.5 0.0 0.8 6.1 97 chr3R 19943884 intron Hs6st - chr3R 19943932 intron Hs6st - chr3R 19943981 intron Hs6st - chr3R_11_19940001 chr3R_19940001 RAL-810 1665 chr3R 20003020 20003040 chr3R 20003101 20003121 4 81 4.5 0.0 2.2 1.2 101 chr3R 20003020 intron Hs6st - chr3R 20003070 intron Hs6st - chr3R 20003121 intron Hs6st - chr3R_4_20000001 chr3R_20000001 RAL-810 1666 chr3R 20008828 20008848 chr3R 20008907 20008929 5 81 4.5 3.5 4.0 1.0 101 chr3R 20008828 intergenic MED25 +,Hs6st - chr3R 20008878 intergenic MED25 +,Hs6st - chr3R 20008929 intergenic MED25 +,Hs6st - chr3R_5_20005001 chr3R_20005001 RAL-810 1667 chr3R 20077037 20077070 chr3R 20077123 20077155 12 86 0.5 4.5 2.5 3.4 118 chr3R 20077037 intergenic not near genes chr3R 20077096 intergenic not near genes chr3R 20077155 intergenic not near genes chr3R_12_20075001 chr3R_20075001 RAL-810 1668 chr3R 20087138 20087156 chr3R 20087232 20087250 5 94 4.0 0.0 2.0 1.7 112 chr3R 20087138 intergenic not near genes chr3R 20087194 intergenic not near genes chr3R 20087250 intergenic not near genes chr3R_5_20085001 chr3R_20085001 RAL-810 1669 chr3R 20109545 20109569 chr3R 20114751 20114775 copia 9 5206 1.0 5.0 3.0 2.2 5230 chr3R 20109545 intergenic not near genes chr3R 20112160 intergenic not near genes chr3R 20114775 intergenic CG10887 + chr3R_9_20110001 chr3R_20110001 RAL-810 1670 chr3R 20137199 20137213 chr3R 20137326 20137340 4 127 1.0 2.0 1.5 1.6 141 chr3R 20137199 intergenic not near genes chr3R 20137270 intergenic not near genes chr3R 20137340 intergenic not near genes chr3R_4_20135001 chr3R_20135001 RAL-810 1671 chr3R 20149614 20149625 chr3R 20151736 20151745 4 2121 23.5 13.5 18.5 0.2 2131 chr3R 20149614 intergenic not near genes chr3R 20150680 intergenic not near genes chr3R 20151745 intergenic not near genes chr3R_4_20150001 chr3R_20150001 RAL-810 1672 chr3R 20156693 20156723 chr3R 20165863 20165893 roo 6 9170 2.5 3.5 3.0 1.5 9200 chr3R 20156693 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165893 intergenic not near genes chr3R_6_20160001 chr3R_20160001 RAL-810 1673 chr3R 20180715 20180725 chr3R 20180800 20180810 8 85 2.0 4.0 3.0 2.0 95 chr3R 20180715 intergenic not near genes chr3R 20180762 intergenic not near genes chr3R 20180810 intergenic not near genes chr3R_8_20180001 chr3R_20180001 RAL-810 1674 chr3R 20195691 20195721 chr3R 20195768 20195796 6 76 2.0 1.5 1.8 2.1 105 chr3R 20195691 intergenic not near genes chr3R 20195744 intergenic not near genes chr3R 20195796 intergenic not near genes chr3R_6_20195001 chr3R_20195001 RAL-810 1675 chr3R 20205586 20205594 chr3R 20205708 20205714 4 121 2.0 9.0 5.5 0.6 128 chr3R 20205586 intron Nlg4 + chr3R 20205650 intron Nlg4 + chr3R 20205714 intron Nlg4 + chr3R_4_20205001 chr3R_20205001 RAL-810 1676 chr3R 20245278 20245302 chr3R 20248888 20248912 F-element 4 3610 3.0 3.0 3.0 1.0 3634 chr3R 20245278 3` UTR Nlg4 + chr3R 20247095 intergenic not near genes chr3R 20248912 intergenic not near genes chr3R_4_20245001 chr3R_20245001 RAL-810 1677 chr3R 20252231 20252253 chr3R 20252309 20252331 12 78 0.0 0.5 0.2 10.0 100 chr3R 20252231 intergenic not near genes chr3R 20252281 intergenic cic + chr3R 20252331 intergenic cic + chr3R_12_20250001 chr3R_20250001 RAL-810 1678 chr3R 20266516 20266545 chr3R 20272987 20273015 Burdock 10 6471 3.5 3.5 3.5 2.2 6499 chr3R 20266516 intron cic + chr3R 20269766 intron cic + chr3R 20273015 intron cic + chr3R_10_20265001 chr3R_20265001 RAL-810 1679 chr3R 20282282 20282309 chr3R 20282358 20282385 10 76 0.5 3.0 1.8 3.6 103 chr3R 20282282 intron cic + chr3R 20282334 intron cic + chr3R 20282385 intron cic + chr3R_10_20280001 chr3R_20280001 RAL-810 1680 chr3R 12396234 12396234 chr3R 20285457 20285473 6 7889228 5.0 0.0 2.5 1.7 7889239 chr3R 12396234 intron CG34402 + chr3R 16340854 exon SF2 - chr3R 20285473 intron cic + chr3R_6_16340001 chr3R_16340001 RAL-810 1681 chr3R 20308187 20308206 chr3R 20308275 20308294 6 88 4.0 0.0 2.0 2.0 107 chr3R 20308187 intergenic not near genes chr3R 20308240 intergenic not near genes chr3R 20308294 intergenic not near genes chr3R_6_20305001 chr3R_20305001 RAL-810 1682 chr3R 20312858 20312884 chr3R 20312944 20312970 7 85 3.0 4.5 3.8 1.5 112 chr3R 20312858 intron CG42668 + chr3R 20312914 intron CG42668 + chr3R 20312970 intron CG42668 + chr3R_7_20310001 chr3R_20310001 RAL-810 1683 chr3R 20330996 20331020 chr3R 20331482 20331506 roo 8 486 3.5 5.0 4.2 1.5 510 chr3R 20330996 intergenic Sirt2 + chr3R 20331251 intergenic Sirt2 + chr3R 20331506 intergenic not near genes chr3R_8_20330001 chr3R_20330001 RAL-810 1684 chr3R 20406484 20406513 chr3R 20406583 20406612 7 99 1.5 0.0 0.8 3.9 128 chr3R 20406484 intron Gfrl - chr3R 20406548 intron Gfrl - chr3R 20406612 intron Gfrl - chr3R_7_20405001 chr3R_20405001 RAL-810 1685 chr3R 20411224 20411244 chr3R 20411438 20411458 7 214 3.5 3.5 3.5 1.6 234 chr3R 20411224 intron Gfrl - chr3R 20411341 intron Gfrl - chr3R 20411458 intron Gfrl - chr3R_7_20410001 chr3R_20410001 RAL-810 1686 chr3R 20433102 20433135 chr3R 20433192 20433225 9 90 0.5 2.0 1.2 4.1 123 chr3R 20433102 intron Gfrl - chr3R 20433164 intron Gfrl - chr3R 20433225 intron Gfrl - chr3R_9_20430001 chr3R_20430001 RAL-810 1687 chr3R 20499868 20499896 chr3R 20499958 20499986 7 90 2.5 1.0 1.8 2.5 118 chr3R 20499868 intergenic Dic2 - chr3R 20499927 intergenic Dic2 - chr3R 20499986 intergenic Dic2 - chr3R_7_20495001 chr3R_20495001 RAL-810 1688 chr3R 20513009 20513033 chr3R 20515712 20515736 opus 8 2703 4.5 3.0 3.8 1.7 2727 chr3R 20513009 intergenic not near genes chr3R 20514372 intergenic not near genes chr3R 20515736 intergenic not near genes chr3R_8_20510001 chr3R_20510001 RAL-810 1689 chr3R 20595603 20595631 chr3R 20595813 20595841 9 209 1.5 1.0 1.2 4.1 238 chr3R 20595603 intron bon + chr3R 20595722 intron bon + chr3R 20595841 intron bon + chr3R_9_20595001 chr3R_20595001 RAL-810 1690 chr3R 20686963 20686989 chr3R 20687398 20687423 6 435 2.5 1.5 2.0 2.0 460 chr3R 20686963 intergenic not near genes chr3R 20687193 intergenic not near genes chr3R 20687423 intergenic not near genes chr3R_6_20685001 chr3R_20685001 RAL-810 1691 chr3R 20703480 20703515 chr3R 20703874 20703909 7 394 1.5 2.0 1.8 2.5 429 chr3R 20703480 intron Oamb - chr3R 20703694 intron Oamb - chr3R 20703909 intron Oamb - chr3R_7_20700001 chr3R_20700001 RAL-810 1692 chr3R 20707744 20707774 chr3R 20707959 20707989 10 215 3.0 2.0 2.5 2.9 245 chr3R 20707744 intron Oamb - chr3R 20707866 intron Oamb - chr3R 20707989 intron Oamb - chr3R_10_20705001 chr3R_20705001 RAL-810 1693 chr3R 20722851 20722886 chr3R 20722978 20723012 8 127 2.0 1.0 1.5 3.2 161 chr3R 20722851 intergenic not near genes chr3R 20722932 intergenic not near genes chr3R 20723012 intergenic not near genes chr3R_8_20720001 chr3R_20720001 RAL-810 1694 chr3R 20730931 20731047 chr3R 20731031 20731135 6 98 0.0 0.0 0.0 6.0 204 chr3R 20730931 intergenic not near genes chr3R 20731033 intergenic not near genes chr3R 20731135 intergenic CG31205 + chr3R_6_20730001 chr3R_20730001 RAL-810 1695 chr3R 20735032 20735048 chr3R 20735108 20735119 5 80 0.5 4.5 2.5 1.4 87 chr3R 20735032 intergenic not near genes chr3R 20735076 intergenic not near genes chr3R 20735119 intergenic not near genes chr3R_5_20735001 chr3R_20735001 RAL-810 1696 chr3R 20787442 20787457 chr3R 20787533 20787548 4 91 1.5 3.0 2.2 1.2 106 chr3R 20787442 intron Syp + chr3R 20787495 intron Syp + chr3R 20787548 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-810 1697 chr3R 20824818 20824854 chr3R 20824894 20824930 14 76 4.0 4.0 4.0 2.8 112 chr3R 20824818 3` UTR AdSS - chr3R 20824874 3` UTR AdSS - chr3R 20824930 3` UTR AdSS - chr3R_14_20820001 chr3R_20820001 RAL-810 1698 chr3R 20850085 20850112 chr3R 20850170 20850197 5 85 3.0 1.5 2.2 1.6 112 chr3R 20850085 intergenic RpS30 + chr3R 20850141 intergenic RpS30 + chr3R 20850197 intergenic RpS30 + chr3R_5_20850001 chr3R_20850001 RAL-810 1699 chr3R 20854489 20854513 chr3R 20859279 20859302 Doc 5 4789 4.0 3.0 3.5 1.1 4813 chr3R 20854489 intron Ir93a - chr3R 20856896 intron Ir93a - chr3R 20859302 exon Ir93a - chr3R_5_20855001 chr3R_20855001 RAL-810 1700 chr3R 20874519 20874550 chr3R 20874604 20874634 15 84 2.0 3.5 2.8 3.9 115 chr3R 20874519 3` UTR TotB + chr3R 20874576 intergenic TotB + chr3R 20874634 intergenic TotB + chr3R_15_20870001 chr3R_20870001 RAL-810 1701 chr3R 20901347 20901375 chr3R 20901433 20901458 10 84 2.0 2.0 2.0 3.3 111 chr3R 20901347 intergenic not near genes chr3R 20901402 intergenic not near genes chr3R 20901458 intergenic CG5621 + chr3R_10_20900001 chr3R_20900001 RAL-810 1702 chr3R 20966128 20966157 chr3R 20966211 20966240 12 83 0.0 1.0 0.5 8.0 112 chr3R 20966128 intron Atpalpha + chr3R 20966184 intron Atpalpha + chr3R 20966240 intron Atpalpha + chr3R_12_20965001 chr3R_20965001 RAL-810 1703 chr3R 21014011 21014044 chr3R 21014089 21014122 12 77 4.0 2.5 3.2 2.9 111 chr3R 21014011 3` UTR Calx + chr3R 21014066 3` UTR Calx + chr3R 21014122 3` UTR Calx + chr3R_12_21010001 chr3R_21010001 RAL-810 1704 chr3R 21074813 21074831 chr3R 21075034 21075051 10 221 1.5 5.0 3.2 2.4 238 chr3R 21074813 intron dmrt93B + chr3R 21074932 intron dmrt93B + chr3R 21075051 intron dmrt93B + chr3R_10_21070001 chr3R_21070001 RAL-810 1705 chr3R 21108043 21108063 chr3R 21108304 21108324 7 260 4.5 2.0 3.2 1.7 281 chr3R 21108043 intergenic Sec15 -,rtet + chr3R 21108184 intergenic Sec15 -,rtet + chr3R 21108324 intergenic rtet +,Sec15 - chr3R_7_21105001 chr3R_21105001 RAL-810 1706 chr3R 21132633 21132637 chr3R 21132716 21132720 4 83 1.0 0.0 0.5 2.7 87 chr3R 21132633 3` UTR Ice2 + chr3R 21132676 3` UTR Ice2 + chr3R 21132720 3` UTR Ice2 + chr3R_4_21130001 chr3R_21130001 RAL-810 1707 chr3R 21183254 21183263 chr3R 21183332 21183341 6 77 1.5 4.0 2.8 1.6 87 chr3R 21183254 intron SNF4Agamma + chr3R 21183298 intron SNF4Agamma + chr3R 21183341 intron SNF4Agamma + chr3R_6_21180001 chr3R_21180001 RAL-810 1708 chr3R 21239808 21239958 chr3R 21239902 21240031 6 83 0.5 0.0 0.2 5.0 223 chr3R 21239808 intergenic not near genes chr3R 21239920 intergenic not near genes chr3R 21240031 intergenic not near genes chr3R_6_21235001 chr3R_21235001 RAL-810 1709 chr3R 21245852 21245860 chr3R 21245936 21245944 4 84 5.0 3.5 4.2 0.8 92 chr3R 21245852 intergenic CG5892 + chr3R 21245898 intergenic CG5892 + chr3R 21245944 intergenic not near genes chr3R_4_21245001 chr3R_21245001 RAL-810 1710 chr3R 21322974 21322984 chr3R 21323053 21323063 4 79 2.0 0.0 1.0 2.0 89 chr3R 21322974 intron CG16791 - chr3R 21323018 intron CG16791 - chr3R 21323063 intron CG16791 - chr3R_4_21320001 chr3R_21320001 RAL-810 1711 chr3R 21330804 21330832 chr3R 21330894 21330922 9 90 3.0 3.0 3.0 2.2 118 chr3R 21330804 intron CG16791 - chr3R 21330863 intron CG16791 - chr3R 21330922 intron CG16791 - chr3R_9_21330001 chr3R_21330001 RAL-810 1712 chr3R 21383282 21383295 chr3R 21383360 21383375 4 79 0.0 1.5 0.8 2.2 93 chr3R 21383282 intergenic not near genes chr3R 21383328 intergenic not near genes chr3R 21383375 intergenic not near genes chr3R_4_21380001 chr3R_21380001 RAL-810 1713 chr3R 21464403 21464424 chr3R 21464489 21464510 5 86 1.5 0.0 0.8 2.8 107 chr3R 21464403 intergenic not near genes chr3R 21464456 intergenic not near genes chr3R 21464510 intergenic not near genes chr3R_5_21460001 chr3R_21460001 RAL-810 1714 chr3R 21472016 21472035 chr3R 21472097 21472115 5 81 3.0 4.0 3.5 1.1 99 chr3R 21472016 intergenic not near genes chr3R 21472066 intergenic not near genes chr3R 21472115 intergenic not near genes chr3R_5_21470001 chr3R_21470001 RAL-810 1715 chr3R 21494678 21494719 chr3R 21494758 21494799 10 80 1.5 1.5 1.5 4.0 121 chr3R 21494678 intergenic not near genes chr3R 21494738 intergenic not near genes chr3R 21494799 intergenic not near genes chr3R_10_21490001 chr3R_21490001 RAL-810 1716 chr3R 21506875 21506909 chr3R 21506961 21506989 4 82 0.0 2.0 1.0 2.0 114 chr3R 21506875 intron C15 + chr3R 21506932 intron C15 + chr3R 21506989 intron C15 + chr3R_4_21505001 chr3R_21505001 RAL-810 1717 chr3R 21518256 21518270 chr3R 21518340 21518354 7 83 0.0 1.0 0.5 4.7 98 chr3R 21518256 intergenic not near genes chr3R 21518305 intergenic not near genes chr3R 21518354 intergenic not near genes chr3R_7_21515001 chr3R_21515001 RAL-810 1718 chr3R 21519985 21520136 chr3R 21520086 21520230 18 98 2.0 2.0 2.0 6.0 245 chr3R 21519985 intergenic not near genes chr3R 21520108 intergenic not near genes chr3R 21520230 intergenic not near genes chr3R_18_21520001 chr3R_21520001 RAL-810 1719 chr3R 21613451 21613468 chr3R 21613532 21613549 9 81 1.5 5.5 3.5 2.0 98 chr3R 21613451 intron InR - chr3R 21613500 intron InR - chr3R 21613549 intron InR - chr3R_9_21610001 chr3R_21610001 RAL-810 1720 chr3R 21641264 21641281 chr3R 21641332 21641357 5 73 2.5 2.0 2.2 1.6 93 chr3R 21641264 intron E2f - chr3R 21641310 intron E2f - chr3R 21641357 intron E2f - chr3R_5_21640001 chr3R_21640001 RAL-810 1721 chr3R 21652545 21652574 chr3R 21652625 21652654 6 80 1.0 0.5 0.8 3.3 109 chr3R 21652545 intron E2f - chr3R 21652600 intron E2f - chr3R 21652654 intron E2f - chr3R_6_21650001 chr3R_21650001 RAL-810 1722 chr3R 21725669 21725688 chr3R 21725805 21725822 4 136 0.0 2.5 1.2 1.8 153 chr3R 21725669 intergenic not near genes chr3R 21725746 intergenic not near genes chr3R 21725822 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-810 1723 chr3R 21761129 21761151 chr3R 21768519 21768527 mdg1 5 7388 3.5 4.5 4.0 1.0 7398 chr3R 21761129 exon CG42335 + chr3R 21764828 intron CG42335 + chr3R 21768527 exon CG42335 + chr3R_5_21760001 chr3R_21760001 RAL-810 1724 chr3R 21790962 21790990 chr3R 21791047 21791075 5 85 4.5 2.0 3.2 1.2 113 chr3R 21790962 intron CASK - chr3R 21791018 intron CASK - chr3R 21791075 intron CASK - chr3R_5_21790001 chr3R_21790001 RAL-810 1725 chr3R 21794472 21794486 chr3R 21794562 21794573 8 89 3.0 3.5 3.2 1.9 101 chr3R 21794472 intron CASK - chr3R 21794522 intron CASK - chr3R 21794573 intron CASK - chr3R_8_21790001 chr3R_21790001 RAL-810 1726 chr3R 8339246 8339247 chr3R 21907534 21907534 7 13568288 11.5 14.5 13.0 0.5 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 RAL-810 1727 chr3R 21907534 21907534 chr3R 28831801 28831802 15 6924268 15.0 9.0 12.0 1.2 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-810 1728 chr3R 8339246 8339247 chr3R 21907535 21907535 6 13568288 11.5 14.5 13.0 0.4 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-810 1729 chr3R 21907535 21907535 chr3R 28831801 28831803 24 6924266 15.0 9.0 12.0 1.8 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_24_25365001 chr3R_25365001 RAL-810 1730 chr3R 21907536 21907536 chr3R 28831801 28831802 19 6924265 14.5 9.0 11.8 1.5 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_19_25365001 chr3R_25365001 RAL-810 1731 chr3R 21924018 21924044 chr3R 21924101 21924101 4 80 3.0 1.0 2.0 1.3 83 chr3R 21924018 intergenic not near genes chr3R 21924060 intergenic not near genes chr3R 21924101 intergenic not near genes chr3R_4_21920001 chr3R_21920001 RAL-810 1732 chr3R 21952140 21952169 chr3R 21952225 21952250 8 84 1.5 4.0 2.8 2.1 110 chr3R 21952140 intron Eip93F + chr3R 21952195 intron Eip93F + chr3R 21952250 intron Eip93F + chr3R_8_21950001 chr3R_21950001 RAL-810 1733 chr3R 21958612 21958615 chr3R 21958702 21958705 4 90 3.5 3.5 3.5 0.9 93 chr3R 21958612 intron Eip93F + chr3R 21958658 intron Eip93F + chr3R 21958705 intron Eip93F + chr3R_4_21955001 chr3R_21955001 RAL-810 1734 chr3R 21958616 21958637 chr3R 21958701 21958725 6 88 1.0 3.5 2.2 1.9 109 chr3R 21958616 intron Eip93F + chr3R 21958670 intron Eip93F + chr3R 21958725 intron Eip93F + chr3R_6_21955001 chr3R_21955001 RAL-810 1735 chr3R 22116414 22116432 chr3R 22116781 22116795 4 366 1.0 4.0 2.5 1.1 381 chr3R 22116414 exon Ir94b - chr3R 22116604 exon Ir94b - chr3R 22116795 exon Ir94b - chr3R_4_22115001 chr3R_22115001 RAL-810 1736 chr3R 22117420 22117445 chr3R 22117496 22117521 7 76 1.0 2.5 1.8 2.5 101 chr3R 22117420 intergenic Ir94b -,Ir94c - chr3R 22117470 intergenic Ir94c -,Ir94b - chr3R 22117521 intergenic Ir94c -,Ir94b - chr3R_7_22115001 chr3R_22115001 RAL-810 1737 chr3R 22234689 22234709 chr3R 22236008 22236028 pogo 6 1316 3.5 3.5 3.5 1.3 1339 chr3R 22234689 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236028 intron SKIP + chr3R_6_22235001 chr3R_22235001 RAL-810 1738 chr3R 22239490 22239522 chr3R 22248550 22248582 roo 10 9059 2.0 2.0 2.0 3.3 9092 chr3R 22239490 intron SKIP + chr3R 22244036 intron SKIP + chr3R 22248582 intron SKIP + chr3R_10_22240001 chr3R_22240001 RAL-810 1739 chr3R 22292475 22292506 chr3R 22292555 22292586 7 80 0.0 1.0 0.5 4.7 111 chr3R 22292475 intron SKIP + chr3R 22292530 intron SKIP + chr3R 22292586 intron SKIP + chr3R_7_22290001 chr3R_22290001 RAL-810 1740 chr3R 22428577 22428608 chr3R 22428653 22428672 7 74 3.5 1.0 2.2 2.2 95 chr3R 22428577 intron CG13847 - chr3R 22428624 intron CG13847 - chr3R 22428672 intron CG13847 - chr3R_7_22425001 chr3R_22425001 RAL-810 1741 chr3R 22433090 22433105 chr3R 22433190 22433202 4 99 4.5 4.0 4.2 0.8 112 chr3R 22433090 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433202 intron CG13847 - chr3R_4_22430001 chr3R_22430001 RAL-810 1742 chr3R 22450544 22450578 chr3R 22453184 22453218 NOF 9 2639 5.0 2.0 3.5 2.0 2674 chr3R 22450544 intron CG34376 + chr3R 22451881 intron CG34376 + chr3R 22453218 intron CG34376 + chr3R_9_22450001 chr3R_22450001 RAL-810 1743 chr3R 22492382 22492414 chr3R 22492463 22492495 7 80 1.5 2.5 2.0 2.3 113 chr3R 22492382 intergenic CG7045 + chr3R 22492438 intergenic CG7045 + chr3R 22492495 intergenic CG7045 +,CG7046 + chr3R_7_22490001 chr3R_22490001 RAL-810 1744 chr3R 22538441 22538474 chr3R 22538526 22538559 9 85 1.5 0.5 1.0 4.5 118 chr3R 22538441 intron CG5326 - chr3R 22538500 intron CG5326 - chr3R 22538559 intron CG5326 - chr3R_9_22535001 chr3R_22535001 RAL-810 1745 chr3R 22646927 22646939 chr3R 22647015 22647027 5 88 8.5 0.0 4.2 1.0 100 chr3R 22646927 intron wake + chr3R 22646977 intron wake + chr3R 22647027 intron wake + chr3R_5_22645001 chr3R_22645001 RAL-810 1746 chr3R 22769106 22769106 chr3R 22769167 22769183 5 72 5.0 1.5 3.2 1.2 77 chr3R 22769106 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769144 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769183 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_5_22765001 chr3R_22765001 RAL-810 1747 chr3R 22769108 22769123 chr3R 22769166 22769200 9 75 3.0 1.5 2.2 2.8 92 chr3R 22769108 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769154 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769200 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_9_22765001 chr3R_22765001 RAL-810 1748 chr3R 22794280 22794299 chr3R 22794506 22794525 8 226 4.0 3.0 3.5 1.8 245 chr3R 22794280 intergenic CG7029 + chr3R 22794402 intergenic CG7029 + chr3R 22794525 intergenic CG7029 + chr3R_8_22790001 chr3R_22790001 RAL-810 1749 chr3R 22797759 22797932 chr3R 22797845 22798028 16 89 0.0 0.0 0.0 16.0 269 chr3R 22797759 intergenic not near genes chr3R 22797894 intergenic not near genes chr3R 22798028 intergenic not near genes chr3R_16_22795001 chr3R_22795001 RAL-810 1750 chr3R 22919155 22919189 chr3R 22919252 22919278 11 96 1.5 2.5 2.0 3.7 123 chr3R 22919155 intron klg + chr3R 22919216 intron klg + chr3R 22919278 intron klg + chr3R_11_22915001 chr3R_22915001 RAL-810 1751 chr3R 22990349 22990381 chr3R 22990604 22990636 5 253 0.0 1.5 0.8 2.8 287 chr3R 22990349 intron,exon Nha2 -,Or94b + chr3R 22990492 intron,intron Nha2 -,Or94b + chr3R 22990636 intron Nha2 - chr3R_5_22990001 chr3R_22990001 RAL-810 1752 chr3R 23016199 23016229 chr3R 23016276 23016305 10 76 2.0 1.0 1.5 4.0 106 chr3R 23016199 intergenic not near genes chr3R 23016252 intergenic not near genes chr3R 23016305 intergenic not near genes chr3R_10_23015001 chr3R_23015001 RAL-810 1753 chr3R 23090412 23090424 chr3R 23090495 23090507 5 83 3.5 3.0 3.2 1.2 95 chr3R 23090412 intron CG13830 - chr3R 23090460 intron CG13830 - chr3R 23090507 intron CG13830 - chr3R_5_23090001 chr3R_23090001 RAL-810 1754 chr3R 23182498 23182517 chr3R 23182612 23182634 7 117 3.0 0.0 1.5 2.8 136 chr3R 23182498 intron Irk1 + chr3R 23182566 intron Irk1 + chr3R 23182634 intron Irk1 + chr3R_7_23180001 chr3R_23180001 RAL-810 1755 chr3R 23245991 23246009 chr3R 23246073 23246088 5 81 3.0 0.5 1.8 1.8 97 chr3R 23245991 intron CG4467 - chr3R 23246040 intron CG4467 - chr3R 23246088 intron CG4467 - chr3R_5_23245001 chr3R_23245001 RAL-810 1756 chr3R 23248202 23248231 chr3R 23248287 23248316 8 84 2.5 4.0 3.2 1.9 114 chr3R 23248202 intron CG4467 - chr3R 23248259 intron CG4467 - chr3R 23248316 intron CG4467 - chr3R_8_23245001 chr3R_23245001 RAL-810 1757 chr3R 23311679 23311710 chr3R 23311772 23311804 9 93 2.0 2.0 2.0 3.0 125 chr3R 23311679 intron pnt - chr3R 23311742 intron pnt - chr3R 23311804 intron pnt - chr3R_9_23310001 chr3R_23310001 RAL-810 1758 chr3R 23338896 23338915 chr3R 23338972 23338988 6 73 3.5 1.0 2.2 1.9 92 chr3R 23338896 intron pnt - chr3R 23338942 intron pnt - chr3R 23338988 intron pnt - chr3R_6_23335001 chr3R_23335001 RAL-810 1759 chr3R 23558409 23558428 chr3R 23560190 23560208 Bari1 7 1781 1.0 5.5 3.2 1.7 1799 chr3R 23558409 intron beat-IV + chr3R 23559308 intron beat-IV + chr3R 23560208 intron beat-IV + chr3R_7_23555001 chr3R_23555001 RAL-810 1760 chr3R 23714711 23714744 chr3R 23714805 23714838 15 94 2.5 1.5 2.0 5.0 127 chr3R 23714711 intron nau - chr3R 23714774 intron nau - chr3R 23714838 intron nau - chr3R_15_23710001 chr3R_23710001 RAL-810 1761 chr3R 23820648 23820667 chr3R 23820731 23820751 7 84 0.5 2.0 1.2 3.2 103 chr3R 23820648 5` UTR CG34355 + chr3R 23820700 5` UTR CG34355 + chr3R 23820751 5` UTR CG34355 + chr3R_7_23820001 chr3R_23820001 RAL-810 1762 chr3R 23835402 23835433 chr3R 23844552 23844583 roo 6 9150 2.0 2.5 2.2 1.9 9181 chr3R 23835402 intron CG34355 + chr3R 23839992 intron CG34355 + chr3R 23844583 intron CG34355 + chr3R_6_23835001 chr3R_23835001 RAL-810 1763 chr3R 24072091 24072109 chr3R 24072528 24072546 jockey 6 436 2.0 5.0 3.5 1.3 455 chr3R 24072091 intron 4EHP - chr3R 24072318 intron 4EHP - chr3R 24072546 intron 4EHP - chr3R_6_24070001 chr3R_24070001 RAL-810 1764 chr3R 24076923 24076944 chr3R 24078390 24078411 hobo 7 1465 4.5 3.0 3.8 1.5 1488 chr3R 24076923 intron 4EHP - chr3R 24077667 intron 4EHP - chr3R 24078411 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-810 1765 chr3R 24080608 24080638 chr3R 24080707 24080737 11 99 2.5 3.5 3.0 2.8 129 chr3R 24080608 intron 4EHP - chr3R 24080672 intron 4EHP - chr3R 24080737 intron 4EHP - chr3R_11_24080001 chr3R_24080001 RAL-810 1766 chr3R 24100460 24100616 chr3R 24100555 24100840 18 195 0.5 2.0 1.2 8.2 380 chr3R 24100460 intron 4EHP - chr3R 24100650 intron 4EHP - chr3R 24100840 intron 4EHP - chr3R_18_24100001 chr3R_24100001 RAL-810 1767 chr3R 24207222 24207243 chr3R 24212298 24212318 flea 6 5076 5.0 4.5 4.8 1.0 5096 chr3R 24207222 intron twin - chr3R 24209770 intron twin - chr3R 24212318 intron twin - chr3R_6_24205001 chr3R_24205001 RAL-810 1768 chr3R 21907534 21907536 chr3R 24389465 24389465 8 2481930 14.5 9.5 12.0 0.6 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_8_23145001 chr3R_23145001 RAL-810 1769 chr3R 24431599 24431622 chr3R 24431678 24431701 7 79 3.5 3.0 3.2 1.7 102 chr3R 24431599 intron nAChRalpha1 - chr3R 24431650 intron nAChRalpha1 - chr3R 24431701 intron nAChRalpha1 - chr3R_7_24430001 chr3R_24430001 RAL-810 1770 chr3R 24433478 24433503 chr3R 24433557 24433581 10 79 1.0 1.5 1.2 4.5 103 chr3R 24433478 intron nAChRalpha1 - chr3R 24433530 intron nAChRalpha1 - chr3R 24433581 intron nAChRalpha1 - chr3R_10_24430001 chr3R_24430001 RAL-810 1771 chr3R 24493274 24493303 chr3R 24493503 24493532 BS 11 228 4.5 2.0 3.2 2.6 258 chr3R 24493274 intergenic not near genes chr3R 24493403 intergenic not near genes chr3R 24493532 intergenic not near genes chr3R_11_24490001 chr3R_24490001 RAL-810 1772 chr3R 24667615 24667632 chr3R 24667692 24667709 6 77 3.5 0.0 1.8 2.1 94 chr3R 24667615 intron slo + chr3R 24667662 intron slo + chr3R 24667709 intron slo + chr3R_6_24665001 chr3R_24665001 RAL-810 1773 chr3R 24670163 24670199 chr3R 24670247 24670283 14 84 1.5 2.0 1.8 5.0 120 chr3R 24670163 intron slo + chr3R 24670223 intron slo + chr3R 24670283 intron slo + chr3R_14_24670001 chr3R_24670001 RAL-810 1774 chr3R 24671220 24671250 chr3R 24671297 24671300 4 70 3.5 2.0 2.8 1.1 80 chr3R 24671220 intron slo + chr3R 24671260 intron slo + chr3R 24671300 intron slo + chr3R_4_24670001 chr3R_24670001 RAL-810 1775 chr3R 24728337 24728354 chr3R 24728509 24728527 7 173 2.0 2.0 2.0 2.3 190 chr3R 24728337 intron tok + chr3R 24728432 intron tok + chr3R 24728527 intron tok + chr3R_7_24725001 chr3R_24725001 RAL-810 1776 chr3R 24730088 24730120 chr3R 24732466 24732491 Doc 8 2376 0.5 0.5 0.5 5.3 2403 chr3R 24730088 intron tok + chr3R 24731290 intron tok + chr3R 24732491 intron tok + chr3R_8_24730001 chr3R_24730001 RAL-810 1777 chr3R 24743050 24743061 chr3R 24743135 24743146 5 85 2.0 4.5 3.2 1.2 96 chr3R 24743050 intron tok + chr3R 24743098 intron tok + chr3R 24743146 intron tok + chr3R_5_24740001 chr3R_24740001 RAL-810 1778 chr3R 24789994 24790011 chr3R 24790139 24790151 6 143 3.0 1.0 2.0 2.0 157 chr3R 24789994 intron,5` UTR Ets96B +,CG13634 - chr3R 24790072 intron,5` UTR Ets96B +,CG13634 - chr3R 24790151 intron Ets96B + chr3R_6_24790001 chr3R_24790001 RAL-810 1779 chr3R 24893471 24893490 chr3R 24893552 24893570 6 80 2.5 1.0 1.8 2.1 99 chr3R 24893471 intron CG31121 - chr3R 24893520 intron CG31121 - chr3R 24893570 intron CG31121 - chr3R_6_24890001 chr3R_24890001 RAL-810 1780 chr3R 24912494 24912514 chr3R 24912576 24912596 11 82 1.0 5.5 3.2 2.6 102 chr3R 24912494 intergenic CR44267 + chr3R 24912545 intergenic CR44267 + chr3R 24912596 intergenic CR44267 + chr3R_11_24910001 chr3R_24910001 RAL-810 1781 chr3R 24927123 24927162 chr3R 24931914 24931953 Doc 8 4789 3.0 0.5 1.8 2.9 4830 chr3R 24927123 intergenic Trf4-2 + chr3R 24929538 intergenic not near genes chr3R 24931953 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 RAL-810 1782 chr3R 25004907 25004918 chr3R 25004990 25005001 6 83 0.0 2.5 1.2 2.7 94 chr3R 25004907 intron tnc + chr3R 25004954 intron tnc + chr3R 25005001 intron tnc + chr3R_6_25000001 chr3R_25000001 RAL-810 1783 chr3R 25136398 25136429 chr3R 25136478 25136509 9 80 2.0 3.0 2.5 2.6 111 chr3R 25136398 3` UTR Bili + chr3R 25136454 3` UTR Bili + chr3R 25136509 3` UTR Bili + chr3R_9_25135001 chr3R_25135001 RAL-810 1784 chr3R 25209595 25209630 chr3R 25209677 25209712 16 82 3.5 2.5 3.0 4.0 117 chr3R 25209595 intron CG13654 + chr3R 25209654 intron CG13654 + chr3R 25209712 intron CG13654 + chr3R_16_25205001 chr3R_25205001 RAL-810 1785 chr3R 25235821 25235842 chr3R 25235901 25235922 5 80 2.0 4.0 3.0 1.2 101 chr3R 25235821 intergenic CG10420 - chr3R 25235872 intergenic CG10420 - chr3R 25235922 intergenic CG10420 - chr3R_5_25235001 chr3R_25235001 RAL-810 1786 chr3R 25267857 25267879 chr3R 25267962 25267984 6 105 0.0 0.0 0.0 6.0 127 chr3R 25267857 intron CR45214 - chr3R 25267920 intron CR45214 - chr3R 25267984 3` UTR CR45214 - chr3R_6_25265001 chr3R_25265001 RAL-810 1787 chr3R 25302133 25302163 chr3R 25302349 25302379 19 217 17.5 23.0 20.2 0.9 246 chr3R 25302133 exon CG13659 + chr3R 25302256 exon CG13659 + chr3R 25302379 intergenic CG13659 +,CG31370 + chr3R_19_25300001 chr3R_25300001 RAL-810 1788 chr3R 25320389 25320397 chr3R 25320475 25320482 4 86 3.5 0.0 1.8 1.4 93 chr3R 25320389 intergenic CG10560 - chr3R 25320436 intergenic CG10560 - chr3R 25320482 intergenic CG10560 - chr3R_4_25320001 chr3R_25320001 RAL-810 1789 chr3R 25368479 25368501 chr3R 25368597 25368619 8 118 3.0 0.0 1.5 3.2 140 chr3R 25368479 intron Fur1 - chr3R 25368549 intron Fur1 - chr3R 25368619 intron Fur1 - chr3R_8_25365001 chr3R_25365001 RAL-810 1790 chr3R 25377093 25377120 chr3R 25377359 25377386 8 266 2.0 3.0 2.5 2.3 293 chr3R 25377093 intron Fur1 - chr3R 25377240 intron Fur1 - chr3R 25377386 intron Fur1 - chr3R_8_25375001 chr3R_25375001 RAL-810 1791 chr3R 25422070 25422097 chr3R 25422150 25422178 6 80 1.0 0.0 0.5 4.0 108 chr3R 25422070 intron Fur1 - chr3R 25422124 intron Fur1 - chr3R 25422178 intron Fur1 - chr3R_6_25420001 chr3R_25420001 RAL-810 1792 chr3R 25431431 25431444 chr3R 25431517 25431530 4 86 3.5 2.5 3.0 1.0 99 chr3R 25431431 intron Fur1 - chr3R 25431480 intron Fur1 - chr3R 25431530 intron Fur1 - chr3R_4_25430001 chr3R_25430001 RAL-810 1793 chr3R 25464151 25464177 chr3R 25464359 25464384 15 207 2.5 2.5 2.5 4.3 233 chr3R 25464151 intron Fur1 - chr3R 25464268 intron Fur1 - chr3R 25464384 intron Fur1 - chr3R_15_25460001 chr3R_25460001 RAL-810 1794 chr3R 25526257 25526281 chr3R 25526333 25526358 7 77 4.5 1.5 3.0 1.8 101 chr3R 25526257 intron msi + chr3R 25526308 intron msi + chr3R 25526358 intron msi + chr3R_7_25525001 chr3R_25525001 RAL-810 1795 chr3R 25716378 25716407 chr3R 25716456 25716485 8 78 5.5 3.0 4.2 1.5 107 chr3R 25716378 intron LpR2 - chr3R 25716432 intron LpR2 - chr3R 25716485 intron LpR2 - chr3R_8_25715001 chr3R_25715001 RAL-810 1796 chr3R 25725828 25725861 chr3R 25734988 25735021 roo 9 9160 5.0 3.5 4.2 1.7 9193 chr3R 25725828 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735021 intron LpR2 - chr3R_9_25730001 chr3R_25730001 RAL-810 1797 chr3R 25765885 25765890 chr3R 25765964 25765967 4 78 5.0 2.5 3.8 0.8 82 chr3R 25765885 intergenic not near genes chr3R 25765926 intergenic not near genes chr3R 25765967 intergenic not near genes chr3R_4_25765001 chr3R_25765001 RAL-810 1798 chr3R 25765891 25765912 chr3R 25765959 25765981 7 75 2.0 2.0 2.0 2.3 90 chr3R 25765891 intergenic not near genes chr3R 25765936 intergenic not near genes chr3R 25765981 intergenic not near genes chr3R_7_25765001 chr3R_25765001 RAL-810 1799 chr3R 25788522 25788545 chr3R 25788611 25788634 6 89 2.0 2.5 2.2 1.9 112 chr3R 25788522 exon CG31380 - chr3R 25788578 exon CG31380 - chr3R 25788634 exon CG31380 - chr3R_6_25785001 chr3R_25785001 RAL-810 1800 chr3R 25796379 25796403 chr3R 25796458 25796462 4 74 2.5 0.0 1.2 1.8 83 chr3R 25796379 intergenic CR43847 - chr3R 25796420 intergenic CR43847 - chr3R 25796462 intergenic CR43847 - chr3R_4_25795001 chr3R_25795001 RAL-810 1801 chr3R 25801285 25801293 chr3R 25802258 25802277 8 982 2.0 2.5 2.2 2.5 992 chr3R 25801285 intergenic not near genes chr3R 25801781 intergenic not near genes chr3R 25802277 intergenic not near genes chr3R_8_25800001 chr3R_25800001 RAL-810 1802 chr3R 25832692 25832717 chr3R 25841874 25841899 roo 5 9182 1.5 2.0 1.8 1.8 9207 chr3R 25832692 exon alpha4GT2 + chr3R 25837296 intron alpha4GT2 + chr3R 25841899 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-810 1803 chr3R 25843637 25843663 chr3R 25843767 25843793 4 130 1.5 3.0 2.2 1.2 156 chr3R 25843637 intergenic CR45653 + chr3R 25843715 intergenic CR45653 + chr3R 25843793 intergenic CR45653 + chr3R_4_25840001 chr3R_25840001 RAL-810 1804 chr3R 25900883 25900908 chr3R 25903600 25903625 7 2717 13.5 27.0 20.2 0.3 2742 chr3R 25900883 exon CG31091 + chr3R 25902254 intergenic CG31091 +,CG31089 + chr3R 25903625 exon,intron CG31089 +,CR43259 - chr3R_7_25900001 chr3R_25900001 RAL-810 1805 chr3R 25920851 25920872 chr3R 25920932 25920953 9 81 3.0 0.0 1.5 3.6 102 chr3R 25920851 3` UTR CG42235 + chr3R 25920902 3` UTR CG42235 + chr3R 25920953 3` UTR CG42235 + chr3R_9_25920001 chr3R_25920001 RAL-810 1806 chr3R 25927503 25927536 chr3R 25927585 25927618 13 82 3.0 0.0 1.5 5.2 115 chr3R 25927503 intron CCAP-R - chr3R 25927560 intron CCAP-R - chr3R 25927618 intron CCAP-R - chr3R_13_25925001 chr3R_25925001 RAL-810 1807 chr3R 26088587 26088614 chr3R 26088684 26088711 6 96 1.0 2.5 1.8 2.1 124 chr3R 26088587 intron dys - chr3R 26088649 intron dys - chr3R 26088711 intron dys - chr3R_6_26085001 chr3R_26085001 RAL-810 1808 chr3R 26093847 26093875 chr3R 26093925 26093951 7 78 2.5 4.0 3.2 1.7 104 chr3R 26093847 intron dys - chr3R 26093899 intron dys - chr3R 26093951 intron dys - chr3R_7_26090001 chr3R_26090001 RAL-810 1809 chr3R 26104063 26104096 chr3R 26105142 26105175 7 1079 21.5 24.5 23.0 0.3 1112 chr3R 26104063 intergenic not near genes chr3R 26104619 intergenic not near genes chr3R 26105175 intergenic not near genes chr3R_7_26100001 chr3R_26100001 RAL-810 1810 chr3R 26121955 26121977 chr3R 26122051 26122074 4 97 0.0 4.0 2.0 1.3 119 chr3R 26121955 intron CG31324 + chr3R 26122014 intron CG31324 + chr3R 26122074 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-810 1811 chr3R 26122466 26122480 chr3R 26122542 26122556 4 76 4.5 2.0 3.2 1.0 90 chr3R 26122466 intron CG31324 + chr3R 26122511 intron CG31324 + chr3R 26122556 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-810 1812 chr3R 26126272 26126291 chr3R 26126377 26126396 5 103 2.5 4.0 3.2 1.2 124 chr3R 26126272 intron CG31324 + chr3R 26126334 intron CG31324 + chr3R 26126396 intron CG31324 + chr3R_5_26125001 chr3R_26125001 RAL-810 1813 chr3R 26235510 26235522 chr3R 26235570 26235571 4 68 3.5 1.5 2.5 1.1 61 chr3R 26235510 5` UTR CR42745 + chr3R 26235540 5` UTR CR42745 + chr3R 26235571 5` UTR CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-810 1814 chr3R 26256013 26256042 chr3R 26256094 26256123 11 79 5.0 4.0 4.5 2.0 110 chr3R 26256013 intron Ald - chr3R 26256068 intron Ald - chr3R 26256123 intron Ald - chr3R_11_26255001 chr3R_26255001 RAL-810 1815 chr3R 26294720 26294748 chr3R 26294798 26294826 8 78 3.0 1.0 2.0 2.7 106 chr3R 26294720 intergenic not near genes chr3R 26294773 intergenic not near genes chr3R 26294826 intergenic not near genes chr3R_8_26290001 chr3R_26290001 RAL-810 1816 chr3R 26320351 26320374 chr3R 26320538 26320561 10 187 1.5 1.5 1.5 4.0 210 chr3R 26320351 intron CG33970 + chr3R 26320456 intron CG33970 + chr3R 26320561 intron CG33970 + chr3R_10_26320001 chr3R_26320001 RAL-810 1817 chr3R 26343026 26343048 chr3R 26343542 26343559 4 514 1.5 2.5 2.0 1.3 533 chr3R 26343026 intron CG33970 + chr3R 26343292 intron CG33970 + chr3R 26343559 intron CG33970 + chr3R_4_26340001 chr3R_26340001 RAL-810 1818 chr3R 26376336 26376351 chr3R 26385494 26385511 roo 4 9159 3.5 0.5 2.0 1.3 9175 chr3R 26376336 intergenic not near genes chr3R 26380924 intergenic not near genes chr3R 26385511 intergenic not near genes chr3R_4_26380001 chr3R_26380001 RAL-810 1819 chr3R 26405921 26405940 chr3R 26405996 26406016 8 76 3.0 4.5 3.8 1.7 95 chr3R 26405921 intergenic not near genes chr3R 26405968 intergenic not near genes chr3R 26406016 intergenic not near genes chr3R_8_26405001 chr3R_26405001 RAL-810 1820 chr3R 26510506 26510535 chr3R 26519563 26519596 roo 12 9060 1.5 1.5 1.5 4.8 9090 chr3R 26510506 intron plum - chr3R 26515051 intron plum - chr3R 26519596 intron,5` UTR plum -,CR45226 + chr3R_12_26515001 chr3R_26515001 RAL-810 1821 chr3R 26553207 26553235 chr3R 26553710 26553739 8 504 1.0 2.5 1.8 2.9 532 chr3R 26553207 intron scrib + chr3R 26553473 intron scrib + chr3R 26553739 intron scrib + chr3R_8_26550001 chr3R_26550001 RAL-810 1822 chr3R 26607739 26607770 chr3R 26607815 26607846 6 75 0.0 4.5 2.2 1.9 107 chr3R 26607739 5` UTR CR44951 + chr3R 26607792 5` UTR CR44951 + chr3R 26607846 5` UTR CR44951 + chr3R_6_26605001 chr3R_26605001 RAL-810 1823 chr3R 26641638 26641662 chr3R 26641724 26641749 10 85 1.5 0.5 1.0 5.0 111 chr3R 26641638 intergenic not near genes chr3R 26641694 intergenic not near genes chr3R 26641749 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-810 1824 chr3R 26642733 26642762 chr3R 26643126 26643156 jockey 4 394 2.5 2.0 2.2 1.2 423 chr3R 26642733 intergenic not near genes chr3R 26642944 intergenic not near genes chr3R 26643156 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-810 1825 chr3R 21907534 21907536 chr3R 26659332 26659337 4 4751800 14.5 8.5 11.5 0.3 4751803 chr3R 21907534 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_4_24280001 chr3R_24280001 RAL-810 1826 chr3R 26660648 26660657 chr3R 26660732 26660741 4 84 1.0 1.0 1.0 2.0 93 chr3R 26660648 intron beat-VII - chr3R 26660694 intron beat-VII - chr3R 26660741 intron beat-VII - chr3R_4_26660001 chr3R_26660001 RAL-810 1827 chr3R 26750922 26750944 chr3R 26751049 26751071 11 127 3.0 0.0 1.5 4.4 149 chr3R 26750922 intergenic not near genes chr3R 26750996 intergenic not near genes chr3R 26751071 intergenic not near genes chr3R_11_26750001 chr3R_26750001 RAL-810 1828 chr3R 26770244 26770272 chr3R 26770321 26770349 5 77 1.5 3.0 2.2 1.6 105 chr3R 26770244 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770349 intergenic not near genes chr3R_5_26770001 chr3R_26770001 RAL-810 1829 chr3R 26789603 26789623 chr3R 26789682 26789702 9 79 0.0 0.0 0.0 9.0 99 chr3R 26789603 intergenic not near genes chr3R 26789652 intergenic not near genes chr3R 26789702 intergenic not near genes chr3R_9_26785001 chr3R_26785001 RAL-810 1830 chr3R 26953452 26953489 chr3R 26953539 26953574 9 86 0.5 2.5 1.5 3.6 122 chr3R 26953452 intron CG6330 - chr3R 26953513 intron CG6330 - chr3R 26953574 intron CG6330 - chr3R_9_26950001 chr3R_26950001 RAL-810 1831 chr3R 27007406 27007436 chr3R 27016541 27016563 roo 12 9132 2.5 3.5 3.0 3.0 9157 chr3R 27007406 intron RYa-R + chr3R 27011984 intron RYa-R + chr3R 27016563 intron RYa-R + chr3R_12_27010001 chr3R_27010001 RAL-810 1832 chr3R 27027689 27027702 chr3R 27027771 27027784 7 80 1.5 1.0 1.2 3.2 95 chr3R 27027689 intron RYa-R + chr3R 27027736 intron RYa-R + chr3R 27027784 intron RYa-R + chr3R_7_27025001 chr3R_27025001 RAL-810 1833 chr3R 27140515 27140542 chr3R 27148125 27148152 412 8 7610 3.5 2.5 3.0 2.0 7637 chr3R 27140515 intron CG6051 - chr3R 27144334 intron CG6051 - chr3R 27148152 intron CG6051 - chr3R_8_27140001 chr3R_27140001 RAL-810 1834 chr3R 27329477 27329492 chr3R 27329554 27329569 6 77 2.0 3.0 2.5 1.7 92 chr3R 27329477 intergenic CG3330 - chr3R 27329523 intergenic CG3330 - chr3R 27329569 intergenic CG3330 - chr3R_6_27325001 chr3R_27325001 RAL-810 1835 chr3R 27342791 27342825 chr3R 27351372 27351405 Tirant 12 8580 3.0 1.0 2.0 4.0 8614 chr3R 27342791 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351405 intron CG42534 + chr3R_12_27345001 chr3R_27345001 RAL-810 1836 chr3R 27385691 27385720 chr3R 27385962 27385991 5 271 1.0 2.5 1.8 1.8 300 chr3R 27385691 intron side - chr3R 27385841 intron side - chr3R 27385991 intron side - chr3R_5_27385001 chr3R_27385001 RAL-810 1837 chr3R 27521155 27521172 chr3R 27530364 27530381 roo 6 9209 4.0 1.0 2.5 1.7 9226 chr3R 27521155 intron CG12885 + chr3R 27525768 intron CG12885 + chr3R 27530381 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-810 1838 chr3R 27627106 27627115 chr3R 27627193 27627217 5 95 2.5 2.0 2.2 1.6 111 chr3R 27627106 intron Tusp + chr3R 27627162 intron Tusp + chr3R 27627217 intron Tusp + chr3R_5_27625001 chr3R_27625001 RAL-810 1839 chr3R 27706779 27706810 chr3R 27706856 27706887 14 77 3.5 2.0 2.8 3.7 108 chr3R 27706779 intergenic CG12428 -,CG12877 + chr3R 27706833 intergenic CG12428 -,CG12877 + chr3R 27706887 intergenic CG12428 -,CG12877 + chr3R_14_27705001 chr3R_27705001 RAL-810 1840 chr3R 27725573 27725603 chr3R 27731015 27731046 I-element 7 5443 1.5 3.5 2.5 2.0 5473 chr3R 27725573 intergenic not near genes chr3R 27728310 intergenic not near genes chr3R 27731046 intergenic not near genes chr3R_7_27725001 chr3R_27725001 RAL-810 1841 chr3R 27856759 27856791 chr3R 27858242 27858274 hopper2 12 1483 1.0 4.5 2.8 3.2 1515 chr3R 27856759 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858274 intron CG34353 - chr3R_12_27855001 chr3R_27855001 RAL-810 1842 chr3R 27862958 27862984 chr3R 27868262 27868285 Transpac 8 5302 3.0 2.0 2.5 2.3 5327 chr3R 27862958 intron CG34353 - chr3R 27865622 intron CG34353 - chr3R 27868285 intron CG34353 - chr3R_8_27865001 chr3R_27865001 RAL-810 1843 chr3R 27875707 27875730 chr3R 27882762 27882785 297 11 7055 0.5 4.5 2.5 3.1 7078 chr3R 27875707 intron CG34353 - chr3R 27879246 intron CG34353 - chr3R 27882785 intron CG34353 - chr3R_11_27875001 chr3R_27875001 RAL-810 1844 chr3R 28035488 28035516 chr3R 28035565 28035586 4 75 0.0 3.0 1.5 1.6 98 chr3R 28035488 intron CG34362 + chr3R 28035537 intron CG34362 + chr3R 28035586 intron CG34362 + chr3R_4_28035001 chr3R_28035001 RAL-810 1845 chr3R 28068492 28068528 chr3R 28073934 28073970 I-element 4 5442 2.0 2.0 2.0 1.3 5478 chr3R 28068492 intron CG34362 + chr3R 28071231 intron CG34362 + chr3R 28073970 intron CG34362 + chr3R_4_28070001 chr3R_28070001 RAL-810 1846 chr3R 28102587 28102591 chr3R 28102825 28102829 4 238 1.0 4.5 2.8 1.1 242 chr3R 28102587 intergenic not near genes chr3R 28102708 intergenic not near genes chr3R 28102829 intergenic not near genes chr3R_4_28100001 chr3R_28100001 RAL-810 1847 chr3R 28118857 28118881 chr3R 28118937 28118961 8 79 0.5 3.5 2.0 2.7 104 chr3R 28118857 intergenic not near genes chr3R 28118909 intergenic not near genes chr3R 28118961 intergenic not near genes chr3R_8_28115001 chr3R_28115001 RAL-810 1848 chr3R 28173663 28173670 chr3R 28181242 28181249 mdg1 4 7579 3.0 1.0 2.0 1.3 7586 chr3R 28173663 intron CG34354 + chr3R 28177456 intron CG34354 + chr3R 28181249 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-810 1849 chr3R 28223907 28223936 chr3R 28224363 28224392 6 456 1.0 0.5 0.8 3.3 485 chr3R 28223907 intron CG34354 + chr3R 28224150 intron CG34354 + chr3R 28224392 intron CG34354 + chr3R_6_28220001 chr3R_28220001 RAL-810 1850 chr3R 28253338 28253373 chr3R 28255848 28255883 jockey 6 2509 3.0 2.0 2.5 1.7 2545 chr3R 28253338 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255883 intergenic not near genes chr3R_6_28250001 chr3R_28250001 RAL-810 1851 chr3R 28282998 28283007 chr3R 28283627 28283636 7 629 4.5 5.5 5.0 1.2 638 chr3R 28282998 exon CG34436 + chr3R 28283317 exon CG34436 + chr3R 28283636 intergenic CG34437 +,CG34436 + chr3R_7_28280001 chr3R_28280001 RAL-810 1852 chr3R 28302110 28302117 chr3R 28302551 28302555 jockey 5 441 2.5 2.5 2.5 1.4 445 chr3R 28302110 intergenic not near genes chr3R 28302332 intergenic not near genes chr3R 28302555 intergenic not near genes chr3R_5_28300001 chr3R_28300001 RAL-810 1853 chr3R 28331507 28331529 chr3R 28331586 28331608 6 79 0.5 1.0 0.8 3.3 101 chr3R 28331507 intron larp - chr3R 28331558 intron larp - chr3R 28331608 intron larp - chr3R_6_28330001 chr3R_28330001 RAL-810 1854 chr3R 28345647 28345669 chr3R 28345723 28345744 4 76 1.5 0.0 0.8 2.2 97 chr3R 28345647 intergenic Moca-cyp + chr3R 28345696 intergenic not near genes chr3R 28345744 intergenic not near genes chr3R_4_28345001 chr3R_28345001 RAL-810 1855 chr3R 28361105 28361119 chr3R 28361312 28361326 5 207 2.5 4.0 3.2 1.2 221 chr3R 28361105 intergenic not near genes chr3R 28361216 intergenic not near genes chr3R 28361326 intergenic not near genes chr3R_5_28360001 chr3R_28360001 RAL-810 1856 chr3R 28382156 28382172 chr3R 28382239 28382255 6 83 4.0 2.5 3.2 1.4 99 chr3R 28382156 intergenic not near genes chr3R 28382206 intergenic not near genes chr3R 28382255 intergenic not near genes chr3R_6_28380001 chr3R_28380001 RAL-810 1857 chr3R 28393698 28393724 chr3R 28393798 28393824 8 100 2.0 2.0 2.0 2.7 126 chr3R 28393698 intergenic not near genes chr3R 28393761 intergenic not near genes chr3R 28393824 intergenic not near genes chr3R_8_28390001 chr3R_28390001 RAL-810 1858 chr3R 28478985 28479167 chr3R 28479081 28479250 9 95 1.0 4.0 2.5 2.6 265 chr3R 28478985 intergenic not near genes chr3R 28479118 intergenic not near genes chr3R 28479250 intergenic not near genes chr3R_9_28475001 chr3R_28475001 RAL-810 1859 chr3R 28537831 28537849 chr3R 28537900 28537933 6 81 2.0 4.0 3.0 1.5 102 chr3R 28537831 intron Ppn - chr3R 28537882 intron Ppn - chr3R 28537933 intron Ppn - chr3R_6_28535001 chr3R_28535001 RAL-810 1860 chr3R 28599374 28599403 chr3R 28599519 28599550 6 146 1.5 0.5 1.0 3.0 176 chr3R 28599374 intergenic Noa36 - chr3R 28599462 intergenic Noa36 - chr3R 28599550 intergenic Noa36 - chr3R_6_28595001 chr3R_28595001 RAL-810 1861 chr3R 28640347 28640361 chr3R 28640430 28640444 5 83 2.0 2.0 2.0 1.7 97 chr3R 28640347 intergenic not near genes chr3R 28640396 intergenic not near genes chr3R 28640444 intergenic not near genes chr3R_5_28640001 chr3R_28640001 RAL-810 1862 chr3R 28652993 28653008 chr3R 28653078 28653104 6 94 1.5 1.5 1.5 2.4 111 chr3R 28652993 intergenic not near genes chr3R 28653048 intergenic not near genes chr3R 28653104 intergenic not near genes chr3R_6_28650001 chr3R_28650001 RAL-810 1863 chr3R 28792887 28792904 chr3R 28797967 28797999 jockey 5 5087 2.0 3.0 2.5 1.4 5112 chr3R 28792887 intergenic not near genes chr3R 28795443 intergenic not near genes chr3R 28797999 intergenic not near genes chr3R_5_28795001 chr3R_28795001 RAL-810 1864 chr3R 28805135 28805140 chr3R 28805227 28805232 4 91 7.5 0.5 4.0 0.8 97 chr3R 28805135 intergenic not near genes chr3R 28805184 intergenic not near genes chr3R 28805232 intergenic not near genes chr3R_4_28805001 chr3R_28805001 RAL-810 1865 chr3R 28827687 28827705 chr3R 28827843 28827861 10 156 4.0 2.5 3.2 2.4 174 chr3R 28827687 intron WASp - chr3R 28827774 intron WASp - chr3R 28827861 intron WASp - chr3R_10_28825001 chr3R_28825001 RAL-810 1866 chr3R 21907534 21907536 chr3R 28831801 28831802 48 6924266 14.5 9.0 11.8 3.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_48_25365001 chr3R_25365001 RAL-810 1867 chr3R 28845984 28846003 chr3R 28846074 28846093 5 90 4.0 2.5 3.2 1.2 109 chr3R 28845984 exon spg + chr3R 28846038 intron spg + chr3R 28846093 intron spg + chr3R_5_28845001 chr3R_28845001 RAL-810 1868 chr3R 28960512 28960538 chr3R 28960597 28960623 6 85 2.0 4.0 3.0 1.5 111 chr3R 28960512 intron CG14521 - chr3R 28960568 intron CG14521 - chr3R 28960623 intron CG14521 - chr3R_6_28960001 chr3R_28960001 RAL-810 1869 chr3R 28971163 28971193 chr3R 28971244 28971274 6 81 1.5 1.0 1.2 2.7 111 chr3R 28971163 5` UTR CR45669 + chr3R 28971218 5` UTR CR45669 + chr3R 28971274 5` UTR CR45669 + chr3R_6_28970001 chr3R_28970001 RAL-810 1870 chr3R 29009955 29009985 chr3R 29010061 29010091 8 106 1.5 2.5 2.0 2.7 136 chr3R 29009955 intron wat - chr3R 29010023 intron wat - chr3R 29010091 intron wat - chr3R_8_29010001 chr3R_29010001 RAL-810 1871 chr3R 29017129 29017158 chr3R 29017223 29017252 7 94 4.0 2.5 3.2 1.7 123 chr3R 29017129 intron wat - chr3R 29017190 intron wat - chr3R 29017252 intron wat - chr3R_7_29015001 chr3R_29015001 RAL-810 1872 chr3R 29067612 29067642 chr3R 29067757 29067790 7 147 2.0 0.0 1.0 3.5 178 chr3R 29067612 intron CG11873 + chr3R 29067701 intron CG11873 + chr3R 29067790 intron CG11873 + chr3R_7_29065001 chr3R_29065001 RAL-810 1873 chr3R 29070058 29070079 chr3R 29070139 29070160 7 81 3.0 2.5 2.8 1.8 102 chr3R 29070058 intron CG11873 + chr3R 29070109 intron CG11873 + chr3R 29070160 intron CG11873 + chr3R_7_29070001 chr3R_29070001 RAL-810 1874 chr3R 29079381 29079411 chr3R 29080753 29080783 NOF 11 1372 2.5 6.0 4.2 2.1 1402 chr3R 29079381 intron CG11873 + chr3R 29080082 intron CG11873 + chr3R 29080783 intron CG11873 + chr3R_11_29080001 chr3R_29080001 RAL-810 1875 chr3R 29195978 29196001 chr3R 29196057 29196080 4 79 3.5 0.5 2.0 1.3 102 chr3R 29195978 intergenic not near genes chr3R 29196029 intergenic not near genes chr3R 29196080 intergenic not near genes chr3R_4_29195001 chr3R_29195001 RAL-810 1876 chr3R 29213060 29213088 chr3R 29213143 29213171 8 82 3.5 4.0 3.8 1.7 111 chr3R 29213060 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213171 intergenic not near genes chr3R_8_29210001 chr3R_29210001 RAL-810 1877 chr3R 29237261 29237283 chr3R 29239282 29239299 4 2019 6.0 2.5 4.2 0.8 2038 chr3R 29237261 exon CG11951 - chr3R 29238280 intron CG11951 - chr3R 29239299 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-810 1878 chr3R 29319825 29319855 chr3R 29320144 29320174 jockey 11 319 5.0 5.0 5.0 1.8 349 chr3R 29319825 intergenic Cnx99A - chr3R 29320000 intergenic Cnx99A - chr3R 29320174 intergenic not near genes chr3R_11_29315001 chr3R_29315001 RAL-810 1879 chr3R 29332368 29332382 chr3R 29332447 29332469 4 84 1.5 3.5 2.5 1.1 101 chr3R 29332368 intergenic not near genes chr3R 29332418 intergenic not near genes chr3R 29332469 intergenic not near genes chr3R_4_29330001 chr3R_29330001 RAL-810 1880 chr3R 29356066 29356081 chr3R 29356147 29356162 8 81 1.5 3.5 2.5 2.3 96 chr3R 29356066 intergenic CR45547 - chr3R 29356114 intergenic CR45547 - chr3R 29356162 3` UTR CR45547 - chr3R_8_29355001 chr3R_29355001 RAL-810 1881 chr3R 29406630 29406644 chr3R 29407916 29407930 jockey 5 1286 3.0 7.5 5.2 0.8 1300 chr3R 29406630 intron Ptp99A + chr3R 29407280 intron Ptp99A + chr3R 29407930 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-810 1882 chr3R 29449354 29449388 chr3R 29449432 29449466 13 78 3.5 3.0 3.2 3.1 112 chr3R 29449354 intron Ptp99A + chr3R 29449410 intron Ptp99A + chr3R 29449466 intron Ptp99A + chr3R_13_29445001 chr3R_29445001 RAL-810 1883 chr3R 29472008 29472036 chr3R 29472100 29472129 6 92 0.5 0.5 0.5 4.0 121 chr3R 29472008 intron Ptp99A + chr3R 29472068 intron Ptp99A + chr3R 29472129 intron Ptp99A + chr3R_6_29470001 chr3R_29470001 RAL-810 1884 chr3R 29474426 29474437 chr3R 29474513 29474524 6 87 2.5 1.0 1.8 2.1 98 chr3R 29474426 intron Ptp99A + chr3R 29474475 intron Ptp99A + chr3R 29474524 intron Ptp99A + chr3R_6_29470001 chr3R_29470001 RAL-810 1885 chr3R 29505910 29505922 chr3R 29505986 29505999 7 77 1.5 5.0 3.2 1.7 89 chr3R 29505910 intergenic not near genes chr3R 29505954 intergenic not near genes chr3R 29505999 intergenic not near genes chr3R_7_29505001 chr3R_29505001 RAL-810 1886 chr3R 29539431 29539454 chr3R 29539507 29539530 4 76 5.0 0.0 2.5 1.1 99 chr3R 29539431 intergenic not near genes chr3R 29539480 intergenic not near genes chr3R 29539530 intergenic not near genes chr3R_4_29535001 chr3R_29535001 RAL-810 1887 chr3R 29566382 29566416 chr3R 29566459 29566493 14 77 2.0 1.0 1.5 5.6 111 chr3R 29566382 intergenic not near genes chr3R 29566438 intergenic not near genes chr3R 29566493 intergenic not near genes chr3R_14_29565001 chr3R_29565001 RAL-810 1888 chr3R 29627563 29627587 chr3R 29627654 29627678 6 90 3.0 3.0 3.0 1.5 115 chr3R 29627563 intergenic not near genes chr3R 29627620 intergenic not near genes chr3R 29627678 intergenic not near genes chr3R_6_29625001 chr3R_29625001 RAL-810 1889 chr3R 29655650 29655674 chr3R 29655729 29655753 7 79 2.0 1.5 1.8 2.5 103 chr3R 29655650 intron Dop1R2 - chr3R 29655702 intron Dop1R2 - chr3R 29655753 intron Dop1R2 - chr3R_7_29655001 chr3R_29655001 RAL-810 1890 chr3R 29689934 29689969 chr3R 29690013 29690048 12 79 2.0 2.0 2.0 4.0 114 chr3R 29689934 intergenic not near genes chr3R 29689991 intergenic not near genes chr3R 29690048 intergenic not near genes chr3R_12_29685001 chr3R_29685001 RAL-810 1891 chr3R 29716994 29717029 chr3R 29717070 29717103 7 76 1.0 1.0 1.0 3.5 109 chr3R 29716994 intergenic Obp99b - chr3R 29717048 intergenic Obp99b - chr3R 29717103 intergenic Obp99b - chr3R_7_29715001 chr3R_29715001 RAL-810 1892 chr3R 29719409 29719431 chr3R 29719495 29719517 6 86 2.5 4.5 3.5 1.3 108 chr3R 29719409 intron CG15506 + chr3R 29719463 intron CG15506 + chr3R 29719517 intron CG15506 + chr3R_6_29715001 chr3R_29715001 RAL-810 1893 chr3R 29738263 29738301 chr3R 29739730 29739768 hobo 13 1466 3.0 2.0 2.5 3.7 1505 chr3R 29738263 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739768 5` UTR CG1969 + chr3R_13_29735001 chr3R_29735001 RAL-810 1894 chr3R 29758938 29758967 chr3R 29759015 29759045 9 77 5.0 4.0 4.5 1.6 107 chr3R 29758938 3` UTR CR44953 - chr3R 29758992 3` UTR CR44953 - chr3R 29759045 intergenic CR44953 - chr3R_9_29755001 chr3R_29755001 RAL-810 1895 chr3R 29760362 29760392 chr3R 29761562 29761592 pogo 13 1201 5.0 2.5 3.8 2.7 1230 chr3R 29760362 intergenic not near genes chr3R 29760977 intergenic not near genes chr3R 29761592 intergenic not near genes chr3R_13_29760001 chr3R_29760001 RAL-810 1896 chr3R 29768478 29768595 chr3R 29768570 29768671 9 83 0.0 0.0 0.0 9.0 193 chr3R 29768478 intron kay + chr3R 29768574 intron kay + chr3R 29768671 intron kay + chr3R_9_29765001 chr3R_29765001 RAL-810 1897 chr3R 29880583 29880618 chr3R 29880668 29880703 12 84 3.5 2.5 3.0 3.0 120 chr3R 29880583 intron CG31038 + chr3R 29880643 intron CG31038 + chr3R 29880703 intron CG31038 + chr3R_12_29880001 chr3R_29880001 RAL-810 1898 chr3R 29882022 29882046 chr3R 29891179 29891203 roo 11 9157 3.0 4.5 3.8 2.3 9181 chr3R 29882022 intron CG31038 + chr3R 29886612 intron CG31038 + chr3R 29891203 intron CG31038 + chr3R_11_29885001 chr3R_29885001 RAL-810 1899 chr3R 29923608 29923639 chr3R 29925455 29925486 8 1848 11.0 23.0 17.0 0.4 1878 chr3R 29923608 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924547 exon Jon99Cii - chr3R 29925486 exon Jon99Ci - chr3R_8_29920001 chr3R_29920001 RAL-810 1900 chr3R 29950582 29950598 chr3R 29950651 29950675 4 74 0.5 2.0 1.2 1.8 93 chr3R 29950582 intergenic TkR99D - chr3R 29950628 intergenic TkR99D - chr3R 29950675 intergenic TkR99D - chr3R_4_29950001 chr3R_29950001 RAL-810 1901 chr3R 29963479 29963509 chr3R 29963577 29963611 7 101 0.0 3.0 1.5 2.8 132 chr3R 29963479 intron TkR99D - chr3R 29963545 intron TkR99D - chr3R 29963611 intron TkR99D - chr3R_7_29960001 chr3R_29960001 RAL-810 1902 chr3R 30009454 30009477 chr3R 30009594 30009617 10 140 0.5 3.0 1.8 3.6 163 chr3R 30009454 intron Nlp + chr3R 30009536 intron Nlp + chr3R 30009617 intron Nlp + chr3R_10_30005001 chr3R_30005001 RAL-810 1903 chr3R 30032165 30032178 chr3R 30032240 30032257 5 77 6.0 2.5 4.2 1.0 92 chr3R 30032165 intron Axn + chr3R 30032211 intron Axn + chr3R 30032257 intron Axn + chr3R_5_30030001 chr3R_30030001 RAL-810 1904 chr3R 30060893 30060928 chr3R 30061018 30061053 10 125 3.5 2.0 2.8 2.6 160 chr3R 30060893 intron sima + chr3R 30060973 intron sima + chr3R 30061053 intron sima + chr3R_10_30060001 chr3R_30060001 RAL-810 1905 chr3R 30099008 30099040 chr3R 30099104 30099135 10 96 2.0 3.0 2.5 2.9 127 chr3R 30099008 intron sima + chr3R 30099072 intron sima + chr3R 30099135 intron sima + chr3R_10_30095001 chr3R_30095001 RAL-810 1906 chr3R 30136962 30136982 chr3R 30137041 30137061 6 79 0.5 3.5 2.0 2.0 99 chr3R 30136962 exon AdoR - chr3R 30137012 intron AdoR - chr3R 30137061 intron AdoR - chr3R_6_30135001 chr3R_30135001 RAL-810 1907 chr3R 30182762 30182782 chr3R 30182900 30182919 4 138 5.0 3.5 4.2 0.8 157 chr3R 30182762 intergenic not near genes chr3R 30182840 intergenic not near genes chr3R 30182919 intergenic not near genes chr3R_4_30180001 chr3R_30180001 RAL-810 1908 chr3R 30210662 30210670 chr3R 30210742 30210750 6 80 0.0 3.0 1.5 2.4 88 chr3R 30210662 intergenic CecA1 +,Anp + chr3R 30210706 intergenic CecA1 +,Anp + chr3R 30210750 intergenic CecA1 +,Anp + chr3R_6_30210001 chr3R_30210001 RAL-810 1909 chr3R 30224648 30224666 chr3R 30224726 30224744 5 78 1.0 1.5 1.2 2.3 96 chr3R 30224648 intergenic not near genes chr3R 30224696 intergenic not near genes chr3R 30224744 intergenic not near genes chr3R_5_30220001 chr3R_30220001 RAL-810 1910 chr3R 30238765 30238792 chr3R 30239929 30239956 1360 6 1164 3.0 5.0 4.0 1.2 1191 chr3R 30238765 intergenic not near genes chr3R 30239360 intergenic not near genes chr3R 30239956 intergenic not near genes chr3R_6_30235001 chr3R_30235001 RAL-810 1911 chr3R 30262576 30262608 chr3R 30262673 30262702 10 96 1.5 1.5 1.5 4.0 126 chr3R 30262576 intergenic not near genes chr3R 30262639 intergenic not near genes chr3R 30262702 intergenic not near genes chr3R_10_30260001 chr3R_30260001 RAL-810 1912 chr3R 30330496 30330523 chr3R 30330575 30330603 8 77 4.0 1.5 2.8 2.1 107 chr3R 30330496 intron hdc + chr3R 30330550 intron hdc + chr3R 30330603 intron hdc + chr3R_8_30330001 chr3R_30330001 RAL-810 1913 chr3R 30364845 30364866 chr3R 30365018 30365039 5 173 1.5 4.0 2.8 1.3 194 chr3R 30364845 3` UTR hdc + chr3R 30364942 3` UTR hdc + chr3R 30365039 3` UTR hdc + chr3R_5_30360001 chr3R_30360001 RAL-810 1914 chr3R 30375537 30375571 chr3R 30383162 30383196 412 14 7624 1.5 3.0 2.2 4.4 7659 chr3R 30375537 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383196 intergenic not near genes chr3R_14_30375001 chr3R_30375001 RAL-810 1915 chr3R 30396217 30396247 chr3R 30404483 30404513 roo 10 8265 5.0 3.0 4.0 2.0 8296 chr3R 30396217 intergenic not near genes chr3R 30400365 intergenic not near genes chr3R 30404513 5` UTR CR45570 + chr3R_10_30400001 chr3R_30400001 RAL-810 1916 chr3R 30440694 30440711 chr3R 30440951 30440970 8 259 2.0 3.0 2.5 2.3 276 chr3R 30440694 intron CG15537 - chr3R 30440832 intron CG15537 - chr3R 30440970 intron CG15537 - chr3R_8_30440001 chr3R_30440001 RAL-810 1917 chr3R 30456397 30456424 chr3R 30456476 30456498 11 79 2.0 7.0 4.5 2.0 101 chr3R 30456397 intergenic CG2224 - chr3R 30456448 3` UTR CG2224 - chr3R 30456498 3` UTR CG2224 - chr3R_11_30455001 chr3R_30455001 RAL-810 1918 chr3R 30458010 30458048 chr3R 30458090 30458128 10 80 1.5 1.5 1.5 4.0 118 chr3R 30458010 intron CG2224 - chr3R 30458069 intron CG2224 - chr3R 30458128 intron CG2224 - chr3R_10_30455001 chr3R_30455001 RAL-810 1919 chr3R 30471899 30471935 chr3R 30471975 30472011 11 76 2.5 3.5 3.0 2.8 112 chr3R 30471899 intron PH4alphaEFB + chr3R 30471955 intron PH4alphaEFB + chr3R 30472011 intron PH4alphaEFB + chr3R_11_30470001 chr3R_30470001 RAL-810 1920 chr3R 30480474 30480511 chr3R 30482941 30482979 jockey 10 2468 0.0 5.5 2.8 2.6 2505 chr3R 30480474 intron PH4alphaEFB + chr3R 30481726 intron PH4alphaEFB + chr3R 30482979 intron PH4alphaEFB + chr3R_10_30480001 chr3R_30480001 RAL-810 1921 chr3R 30498408 30498433 chr3R 30498608 30498633 11 200 0.0 3.5 1.8 3.9 225 chr3R 30498408 intron PH4alphaNE1 - chr3R 30498520 intron PH4alphaNE1 - chr3R 30498633 intron PH4alphaNE1 - chr3R_11_30495001 chr3R_30495001 RAL-810 1922 chr3R 30544667 30544689 chr3R 30544736 30544769 4 72 0.5 0.0 0.2 3.3 102 chr3R 30544667 intron tmod + chr3R 30544718 intron tmod + chr3R 30544769 intron tmod + chr3R_4_30540001 chr3R_30540001 RAL-810 1923 chr3R 30551271 30551300 chr3R 30551355 30551384 7 82 1.0 3.0 2.0 2.3 113 chr3R 30551271 intron tmod + chr3R 30551328 intron tmod + chr3R 30551384 intron tmod + chr3R_7_30550001 chr3R_30550001 RAL-810 1924 chr3R 30627603 30627637 chr3R 30627683 30627717 8 73 0.5 1.5 1.0 4.0 114 chr3R 30627603 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627717 exon CG2267 - chr3R_8_30625001 chr3R_30625001 RAL-810 1925 chr3R 30679520 30679545 chr3R 30686989 30687013 blood 4 7469 1.5 4.5 3.0 1.0 7493 chr3R 30679520 intergenic not near genes chr3R 30683266 intergenic not near genes chr3R 30687013 intergenic not near genes chr3R_4_30680001 chr3R_30680001 RAL-810 1926 chr3R 30690166 30690183 chr3R 30690249 30690265 6 82 2.5 2.0 2.2 1.9 99 chr3R 30690166 intergenic Spn100A + chr3R 30690216 intergenic Spn100A + chr3R 30690265 intergenic Spn100A + chr3R_6_30690001 chr3R_30690001 RAL-810 1927 chr3R 30900540 30900566 chr3R 30901674 30901701 4 1133 2.0 2.5 2.2 1.2 1161 chr3R 30900540 3` UTR Cyp4c3 + chr3R 30901120 intron CG33483 - chr3R 30901701 intron CG33483 - chr3R_4_30900001 chr3R_30900001 RAL-810 1928 chr3R 31042112 31042139 chr3R 31042199 31042226 4 87 6.0 2.0 4.0 0.8 114 chr3R 31042112 intron CanA1 + chr3R 31042169 intron CanA1 + chr3R 31042226 intron CanA1 + chr3R_4_31040001 chr3R_31040001 RAL-810 1929 chr3R 31067030 31067056 chr3R 31067155 31067178 6 125 0.0 6.0 3.0 1.5 148 chr3R 31067030 intron Sox100B + chr3R 31067104 intron Sox100B + chr3R 31067178 intron Sox100B + chr3R_6_31065001 chr3R_31065001 RAL-810 1930 chr3R 31074231 31074262 chr3R 31081829 31081860 springer 7 7598 2.0 2.0 2.0 2.3 7629 chr3R 31074231 intron Sox100B + chr3R 31078046 intron Sox100B + chr3R 31081860 intron Sox100B + chr3R_7_31075001 chr3R_31075001 RAL-810 1931 chr3R 31146750 31146784 chr3R 31146827 31146862 13 78 1.0 2.0 1.5 5.2 112 chr3R 31146750 intron Gycbeta100B + chr3R 31146806 intron Gycbeta100B + chr3R 31146862 intron Gycbeta100B + chr3R_13_31145001 chr3R_31145001 RAL-810 1932 chr3R 31274362 31274389 chr3R 31274440 31274467 4 78 2.0 2.5 2.2 1.2 105 chr3R 31274362 intergenic not near genes chr3R 31274414 intergenic not near genes chr3R 31274467 intergenic not near genes chr3R_4_31270001 chr3R_31270001 RAL-810 1933 chr3R 31279373 31279408 chr3R 31285564 31285599 diver 6 6190 3.0 0.0 1.5 2.4 6226 chr3R 31279373 intergenic not near genes chr3R 31282486 intergenic not near genes chr3R 31285599 intergenic not near genes chr3R_6_31280001 chr3R_31280001 RAL-810 1934 chr3R 31348054 31348084 chr3R 31348131 31348161 7 77 3.5 0.5 2.0 2.3 107 chr3R 31348054 intron CG34347 + chr3R 31348108 intron CG34347 + chr3R 31348161 intron CG34347 + chr3R_7_31345001 chr3R_31345001 RAL-810 1935 chr3R 31412708 31412742 chr3R 31412801 31412835 6 93 2.5 1.5 2.0 2.0 127 chr3R 31412708 intron Gprk2 + chr3R 31412772 intron Gprk2 + chr3R 31412835 intron Gprk2 + chr3R_6_31410001 chr3R_31410001 RAL-810 1936 chr3R 31426884 31426912 chr3R 31426976 31427004 8 92 2.5 3.0 2.8 2.1 120 chr3R 31426884 intron Gprk2 + chr3R 31426944 intron Gprk2 + chr3R 31427004 intron Gprk2 + chr3R_8_31425001 chr3R_31425001 RAL-810 1937 chr3R 31435366 31435391 chr3R 31435518 31435543 10 152 2.5 3.5 3.0 2.5 177 chr3R 31435366 intron Gprk2 + chr3R 31435454 intron Gprk2 + chr3R 31435543 intron Gprk2 + chr3R_10_31435001 chr3R_31435001 RAL-810 1938 chr3R 31606138 31606171 chr3R 31606300 31606333 5 161 0.5 1.0 0.8 2.8 195 chr3R 31606138 intron CycG - chr3R 31606236 intron CycG - chr3R 31606333 intron CycG - chr3R_5_31605001 chr3R_31605001 RAL-810 1939 chr3R 31630060 31630083 chr3R 31630165 31630188 11 105 2.5 0.5 1.5 4.4 128 chr3R 31630060 intron kek6 + chr3R 31630124 intron kek6 + chr3R 31630188 intron kek6 + chr3R_11_31630001 chr3R_31630001 RAL-810 1940 chr3R 31691530 31691563 chr3R 31696296 31696326 Doc 10 4765 1.5 4.0 2.8 2.6 4796 chr3R 31691530 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696326 intergenic not near genes chr3R_10_31690001 chr3R_31690001 RAL-810 1941 chr3R 31860270 31860298 chr3R 31860350 31860378 6 80 2.5 1.5 2.0 2.0 108 chr3R 31860270 intron heph - chr3R 31860324 intron heph - chr3R 31860378 intron heph - chr3R_6_31860001 chr3R_31860001 RAL-810 1942 chr3R 31915482 31915518 chr3R 31915588 31915625 11 103 2.5 0.0 1.2 5.0 143 chr3R 31915482 intron heph - chr3R 31915554 intron heph - chr3R 31915625 intron heph - chr3R_11_31915001 chr3R_31915001 RAL-810 1943 chr3R 31924171 31924179 chr3R 31924322 31924331 4 152 4.5 0.0 2.2 1.2 160 chr3R 31924171 intron heph - chr3R 31924251 intron heph - chr3R 31924331 intron heph - chr3R_4_31920001 chr3R_31920001 RAL-810 1944 chr3R 31997999 31998025 chr3R 32005469 32005489 blood 10 7469 1.0 3.5 2.2 3.1 7490 chr3R 31997999 intron heph - chr3R 32001744 intron heph - chr3R 32005489 intron heph - chr3R_10_32000001 chr3R_32000001 RAL-810 1945 chr4 76501 76518 chr4 81944 81961 I-element 4 5443 5.5 7.5 6.5 0.5 5460 chr4 76501 intron pan + chr4 79231 intron pan + chr4 81961 intron pan + chr4_4_75001 chr4_75001 RAL-810 1946 chr4 319987 320018 chr4 328163 328194 Stalker2 12 8176 3.0 3.0 3.0 3.0 8207 chr4 319987 3` UTR CG32850 + chr4 324090 intron CG32850 + chr4 328194 3` UTR,3` UTR CG32850 +,PMCA - chr4_12_320001 chr4_320001 RAL-810 1947 chr4 397377 397404 chr4 397640 397667 12 262 1.5 1.5 1.5 4.8 290 chr4 397377 intergenic not near genes chr4 397522 intergenic not near genes chr4 397667 intergenic not near genes chr4_12_395001 chr4_395001 RAL-810 1948 chr4 671610 671636 chr4 680193 680217 Tirant 9 8583 0.5 2.5 1.5 3.6 8607 chr4 671610 intron CG11360 + chr4 675914 intron CG11360 + chr4 680217 intron CG11360 + chr4_9_675001 chr4_675001 RAL-810 1949 chr4 959625 959652 chr4 959804 959830 13 179 2.0 4.5 3.2 3.1 205 chr4 959625 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959830 5` UTR CR44030 + chr4_13_955001 chr4_955001 RAL-810 1950 chr4 972495 972525 chr4 972577 972607 11 82 0.5 4.0 2.2 3.4 112 chr4 972495 intron fuss - chr4 972551 intron fuss - chr4 972607 intron fuss - chr4_11_970001 chr4_970001 RAL-810 1951 chr4 1250562 1250581 chr4 1250648 1250667 6 86 0.5 3.5 2.0 2.0 105 chr4 1250562 intron Caps + chr4 1250614 intron Caps + chr4 1250667 intron Caps + chr4_6_1250001 chr4_1250001 RAL-810 1952 chrX 292430 292446 chrX 293089 293105 G3 7 659 2.5 22.5 12.5 0.5 675 chrX 292430 intron,intron CG3777 +,CG13375 - chrX 292768 intron,intron CG3777 +,CG13375 - chrX 293105 intron,intron CG3777 +,CG13375 - chrX_7_290001 chrX_290001 RAL-810 1953 chrX 295868 295882 chrX 303488 303501 412 5 7620 1.5 3.5 2.5 1.4 7633 chrX 295868 intron CG3777 + chrX 299684 intron CG3777 + chrX 303501 intron CG3777 + chrX_5_295001 chrX_295001 RAL-810 1954 chrX 318475 318499 chrX 323561 323585 flea 10 5086 3.5 2.0 2.8 2.6 5110 chrX 318475 intron,intron CG3777 +,CG32816 - chrX 321030 intron,intron CG3777 +,CG32816 - chrX 323585 intron,intron CG3777 +,CG32816 - chrX_10_320001 chrX_320001 RAL-810 1955 chrX 440994 441022 chrX 441072 441098 6 78 3.0 1.5 2.2 1.9 104 chrX 440994 intron CG32816 - chrX 441046 intron CG32816 - chrX 441098 intron CG32816 - chrX_6_440001 chrX_440001 RAL-810 1956 chrX 450367 450390 chrX 450445 450468 7 78 2.5 3.0 2.8 1.8 101 chrX 450367 intron CG32816 - chrX 450418 intron CG32816 - chrX 450468 intron CG32816 - chrX_7_450001 chrX_450001 RAL-810 1957 chrX 547632 547658 chrX 547876 547902 6 244 1.5 1.5 1.5 2.4 270 chrX 547632 intron Appl + chrX 547767 intron Appl + chrX 547902 intron Appl + chrX_6_545001 chrX_545001 RAL-810 1958 chrX 551427 551447 chrX 558989 559009 412 7 7560 3.5 2.0 2.8 1.8 7582 chrX 551427 intron Appl + chrX 555218 intron Appl + chrX 559009 intron Appl + chrX_7_555001 chrX_555001 RAL-810 1959 chrX 667650 667681 chrX 667734 667765 8 84 2.5 2.5 2.5 2.3 115 chrX 667650 intergenic not near genes chrX 667708 intergenic not near genes chrX 667765 intergenic not near genes chrX_8_665001 chrX_665001 RAL-810 1960 chrX 670265 670294 chrX 670345 670374 7 80 0.5 1.0 0.8 3.9 109 chrX 670265 intergenic not near genes chrX 670320 intergenic not near genes chrX 670374 intergenic not near genes chrX_7_670001 chrX_670001 RAL-810 1961 chrX 680842 680867 chrX 680924 680950 7 81 2.0 3.5 2.8 1.8 108 chrX 680842 intergenic not near genes chrX 680896 intergenic not near genes chrX 680950 intergenic not near genes chrX_7_680001 chrX_680001 RAL-810 1962 chrX 695305 695321 chrX 695382 695398 5 77 3.0 3.0 3.0 1.2 93 chrX 695305 intron sdk + chrX 695352 intron sdk + chrX 695398 intron sdk + chrX_5_695001 chrX_695001 RAL-810 1963 chrX 802287 802318 chrX 802364 802395 8 77 2.5 1.5 2.0 2.7 108 chrX 802287 exon CG13359 - chrX 802341 exon CG13359 - chrX 802395 exon CG13359 - chrX_8_800001 chrX_800001 RAL-810 1964 chrX 806782 806802 chrX 806878 806898 4 96 2.5 0.5 1.5 1.6 116 chrX 806782 intron Sec22 + chrX 806840 intron Sec22 + chrX 806898 intron Sec22 + chrX_4_805001 chrX_805001 RAL-810 1965 chrX 812275 812293 chrX 817898 817920 297 11 5626 3.5 1.0 2.2 3.4 5645 chrX 812275 intron CG43867 - chrX 815098 intron CG43867 - chrX 817920 intron CG43867 - chrX_11_815001 chrX_815001 RAL-810 1966 chrX 827602 827633 chrX 835394 835425 roo 8 7792 1.5 4.0 2.8 2.1 7823 chrX 827602 intron CG43867 - chrX 831514 intron CG43867 - chrX 835425 intron CG43867 - chrX_8_830001 chrX_830001 RAL-810 1967 chrX 906708 906720 chrX 908497 908509 S-element 5 1789 1.5 7.0 4.2 1.0 1801 chrX 906708 intron CG43867 - chrX 907608 intron CG43867 - chrX 908509 intron CG43867 - chrX_5_905001 chrX_905001 RAL-810 1968 chrX 1005222 1005229 chrX 1005811 1005818 4 589 2.5 0.5 1.5 1.6 596 chrX 1005222 intergenic not near genes chrX 1005520 intergenic not near genes chrX 1005818 intergenic not near genes chrX_4_1005001 chrX_1005001 RAL-810 1969 chrX 1053117 1053120 chrX 16983076 16983076 4 15929958 9.0 8.5 8.8 0.4 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-810 1970 chrX 1150565 1150584 chrX 1151007 1151026 4 442 1.0 1.5 1.2 1.8 461 chrX 1150565 intergenic not near genes chrX 1150796 intergenic not near genes chrX 1151026 intergenic not near genes chrX_4_1150001 chrX_1150001 RAL-810 1971 chrX 1205534 1205556 chrX 1205614 1205625 6 78 0.5 4.0 2.2 1.9 91 chrX 1205534 intergenic CG11381 + chrX 1205580 intergenic CG11381 + chrX 1205625 intergenic CG11381 + chrX_6_1205001 chrX_1205001 RAL-810 1972 chrX 1357778 1357805 chrX 1367948 1367975 Doc 12 10170 3.5 4.0 3.8 2.5 10197 chrX 1357778 intergenic png - chrX 1362876 intergenic not near genes chrX 1367975 intergenic not near genes chrX_12_1360001 chrX_1360001 RAL-810 1973 chrX 1402264 1402288 chrX 1402622 1402628 8 355 5.0 1.0 3.0 2.0 364 chrX 1402264 intergenic not near genes chrX 1402446 intergenic not near genes chrX 1402628 intergenic not near genes chrX_8_1400001 chrX_1400001 RAL-810 1974 chrX 1428591 1428626 chrX 1428677 1428712 8 86 2.5 2.5 2.5 2.3 121 chrX 1428591 intron futsch + chrX 1428652 intron futsch + chrX 1428712 intron futsch + chrX_8_1425001 chrX_1425001 RAL-810 1975 chrX 1518055 1518069 chrX 1523438 1523441 jockey 6 5394 2.0 3.5 2.8 1.6 5386 chrX 1518055 intergenic inc + chrX 1520748 intergenic not near genes chrX 1523441 intergenic not near genes chrX_6_1520001 chrX_1520001 RAL-810 1976 chrX 1627984 1628001 chrX 1635444 1635469 gtwin 4 7466 1.5 3.0 2.2 1.2 7485 chrX 1627984 intron,intron Mur2B -,br + chrX 1631726 intron,intron Mur2B -,br + chrX 1635469 intron,intron Mur2B -,br + chrX_4_1630001 chrX_1630001 RAL-810 1977 chrX 1674855 1674874 chrX 1674931 1674950 6 76 4.5 0.0 2.2 1.9 95 chrX 1674855 3` UTR CG32809 - chrX 1674902 3` UTR CG32809 - chrX 1674950 3` UTR CG32809 - chrX_6_1670001 chrX_1670001 RAL-810 1978 chrX 1930541 1930555 chrX 1938112 1938125 opus 10 7570 2.5 3.0 2.8 2.6 7584 chrX 1930541 intergenic CG11596 + chrX 1934333 intergenic not near genes chrX 1938125 3` UTR CG3857 - chrX_10_1930001 chrX_1930001 RAL-810 1979 chrX 2096362 2096388 chrX 2096455 2096480 7 93 1.5 1.5 1.5 2.8 118 chrX 2096362 intron csw + chrX 2096421 intron csw + chrX 2096480 intron csw + chrX_7_2095001 chrX_2095001 RAL-810 1980 chrX 2291646 2291652 chrX 2291729 2291735 4 83 4.0 0.0 2.0 1.3 89 chrX 2291646 intron CG2865 - chrX 2291690 intron CG2865 - chrX 2291735 intron CG2865 - chrX_4_2290001 chrX_2290001 RAL-810 1981 chrX 2399838 2399870 chrX 2408191 2408223 roo 10 8347 0.0 3.0 1.5 4.0 8385 chrX 2399838 intergenic not near genes chrX 2404030 intergenic not near genes chrX 2408223 intergenic not near genes chrX_10_2400001 chrX_2400001 RAL-810 1982 chrX 2419700 2419732 chrX 2419787 2419820 10 88 2.5 1.0 1.8 3.6 120 chrX 2419700 intergenic not near genes chrX 2419760 intergenic not near genes chrX 2419820 intergenic not near genes chrX_10_2415001 chrX_2415001 RAL-810 1983 chrX 2535823 2535856 chrX 2535899 2535932 8 75 1.5 0.5 1.0 4.0 109 chrX 2535823 intron trol - chrX 2535878 intron trol - chrX 2535932 intron trol - chrX_8_2535001 chrX_2535001 RAL-810 1984 chrX 2544772 2544806 chrX 2544848 2544882 7 75 0.5 2.5 1.5 2.8 110 chrX 2544772 intron,3` UTR trol -,mir-4955 - chrX 2544827 intron,3` UTR trol -,mir-4955 - chrX 2544882 intron,3` UTR trol -,mir-4955 - chrX_7_2540001 chrX_2540001 RAL-810 1985 chrX 2578824 2578845 chrX 2578900 2578937 7 89 2.0 1.5 1.8 2.5 113 chrX 2578824 intergenic Pdfr +,Vha36-3 - chrX 2578880 intergenic Vha36-3 -,Pdfr + chrX 2578937 intergenic Vha36-3 -,Pdfr + chrX_7_2575001 chrX_2575001 RAL-810 1986 chrX 2610385 2610402 chrX 2617502 2617508 HMS-Beagle 4 7114 5.5 2.0 3.8 0.8 7123 chrX 2610385 intergenic CG8636 - chrX 2613946 intergenic not near genes chrX 2617508 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-810 1987 chrX 2752237 2752248 chrX 2752319 2752330 5 80 4.5 2.0 3.2 1.2 93 chrX 2752237 intron kirre + chrX 2752284 intron kirre + chrX 2752330 intron kirre + chrX_5_2750001 chrX_2750001 RAL-810 1988 chrX 2844898 2844931 chrX 2852308 2852341 mdg1 7 7410 2.0 2.0 2.0 2.3 7443 chrX 2844898 intron kirre + chrX 2848620 intron kirre + chrX 2852341 intron kirre + chrX_7_2845001 chrX_2845001 RAL-810 1989 chrX 2877042 2877070 chrX 2877144 2877172 9 102 3.0 2.0 2.5 2.6 130 chrX 2877042 intron kirre + chrX 2877107 intron kirre + chrX 2877172 intron kirre + chrX_9_2875001 chrX_2875001 RAL-810 1990 chrX 3058019 3058031 chrX 3058260 3058272 pogo 4 241 1.0 2.5 1.8 1.4 253 chrX 3058019 intron kirre + chrX 3058146 intron kirre + chrX 3058272 intron kirre + chrX_4_3055001 chrX_3055001 RAL-810 1991 chrX 3075637 3075648 chrX 3080944 3080955 Transpac 5 5307 0.0 0.0 0.0 5.0 5318 chrX 3075637 intron kirre + chrX 3078296 intron kirre + chrX 3080955 intron kirre + chrX_5_3075001 chrX_3075001 RAL-810 1992 chrX 3206488 3206505 chrX 3206567 3206584 4 79 0.0 3.5 1.8 1.4 96 chrX 3206488 intron dnc + chrX 3206536 intron dnc + chrX 3206584 intron dnc + chrX_4_3205001 chrX_3205001 RAL-810 1993 chrX 3306343 3306363 chrX 3306425 3306442 8 82 1.5 0.0 0.8 4.4 99 chrX 3306343 intron dnc + chrX 3306392 intron dnc + chrX 3306442 intron dnc + chrX_8_3305001 chrX_3305001 RAL-810 1994 chrX 3415023 3415042 chrX 3421208 3421226 3S18 5 6184 1.5 3.0 2.2 1.6 6203 chrX 3415023 intron,intron CR44999 +,CG12535 - chrX 3418124 intron,intron CR44999 +,CG12535 - chrX 3421226 intron,intron CR44999 +,CG12535 - chrX_5_3415001 chrX_3415001 RAL-810 1995 chrX 3459987 3460009 chrX 3460064 3460086 5 77 5.0 1.0 3.0 1.2 99 chrX 3459987 intron,intron CR44999 +,CG16782 - chrX 3460036 intron,5` UTR CR44999 +,CG16782 - chrX 3460086 intron,5` UTR CR44999 +,CG16782 - chrX_5_3460001 chrX_3460001 RAL-810 1996 chrX 3493104 3493123 chrX 3502263 3502282 roo 4 9155 2.5 2.5 2.5 1.1 9178 chrX 3493104 intron,intron CR44999 +,Gas8 - chrX 3497693 intron,intron CR44999 +,Gas8 - chrX 3502282 intron,intron CR44999 +,Gas8 - chrX_4_3495001 chrX_3495001 RAL-810 1997 chrX 3535413 3535431 chrX 3535504 3535522 5 91 0.0 4.0 2.0 1.7 109 chrX 3535413 intron CG32791 - chrX 3535468 intron CG32791 - chrX 3535522 intron CG32791 - chrX_5_3535001 chrX_3535001 RAL-810 1998 chrX 3597550 3597576 chrX 3619717 3619744 roo 5 22168 5.0 2.0 3.5 1.1 22194 chrX 3597550 intron AstA-R1 + chrX 3608647 intron AstA-R1 + chrX 3619744 intron AstA-R1 + chrX_5_3605001 chrX_3605001 RAL-810 1999 chrX 3620463 3620495 chrX 3620562 3620594 10 99 2.5 2.0 2.2 3.1 131 chrX 3620463 intron AstA-R1 + chrX 3620528 intron AstA-R1 + chrX 3620594 intron AstA-R1 + chrX_10_3620001 chrX_3620001 RAL-810 2000 chrX 3630543 3630571 chrX 3630619 3630647 7 76 3.0 1.5 2.2 2.2 104 chrX 3630543 intron AstA-R1 + chrX 3630595 intron AstA-R1 + chrX 3630647 intron AstA-R1 + chrX_7_3630001 chrX_3630001 RAL-810 2001 chrX 3636193 3636219 chrX 3637126 3637152 6 933 3.0 4.0 3.5 1.3 959 chrX 3636193 intron AstA-R1 + chrX 3636672 intron AstA-R1 + chrX 3637152 intron AstA-R1 + chrX_6_3635001 chrX_3635001 RAL-810 2002 chrX 3703708 3703728 chrX 3703796 3703814 6 88 3.0 3.0 3.0 1.5 106 chrX 3703708 intergenic CR45102 + chrX 3703761 intergenic CR45102 + chrX 3703814 intergenic not near genes chrX_6_3700001 chrX_3700001 RAL-810 2003 chrX 3713103 3713137 chrX 3713211 3713244 8 108 3.0 2.5 2.8 2.1 141 chrX 3713103 intron Rala - chrX 3713174 intron Rala - chrX 3713244 intron Rala - chrX_8_3710001 chrX_3710001 RAL-810 2004 chrX 3726766 3726794 chrX 3730160 3730191 NOF 10 3396 3.0 0.0 1.5 4.0 3425 chrX 3726766 intron tlk + chrX 3728478 intron tlk + chrX 3730191 intron tlk + chrX_10_3725001 chrX_3725001 RAL-810 2005 chrX 3842325 3842349 chrX 3842566 3842590 pogo 8 241 1.5 3.5 2.5 2.3 265 chrX 3842325 intron ec + chrX 3842458 intron ec + chrX 3842590 intron ec + chrX_8_3840001 chrX_3840001 RAL-810 2006 chrX 3880467 3880489 chrX 3880553 3880575 7 85 3.0 3.0 3.0 1.8 108 chrX 3880467 intergenic VhaAC39-1 + chrX 3880521 intergenic VhaAC39-1 + chrX 3880575 intergenic VhaAC39-1 + chrX_7_3880001 chrX_3880001 RAL-810 2007 chrX 3881270 3881305 chrX 3881409 3881443 6 139 1.5 2.5 2.0 2.0 173 chrX 3881270 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881443 intron VhaAC39-1 + chrX_6_3880001 chrX_3880001 RAL-810 2008 chrX 3986861 3986892 chrX 3994494 3994525 412 11 7633 3.5 1.5 2.5 3.1 7664 chrX 3986861 intergenic not near genes chrX 3990693 intergenic not near genes chrX 3994525 intergenic not near genes chrX_11_3990001 chrX_3990001 RAL-810 2009 chrX 4021174 4021187 chrX 4021272 4021285 4 98 1.0 2.0 1.5 1.6 111 chrX 4021174 intergenic not near genes chrX 4021230 intergenic not near genes chrX 4021285 intergenic not near genes chrX_4_4020001 chrX_4020001 RAL-810 2010 chrX 4132670 4132698 chrX 4132839 4132867 5 169 3.0 3.0 3.0 1.2 197 chrX 4132670 3` UTR GlcAT-I + chrX 4132768 3` UTR GlcAT-I + chrX 4132867 intergenic Fas2 -,GlcAT-I + chrX_5_4130001 chrX_4130001 RAL-810 2011 chrX 4157904 4157925 chrX 4164939 4164960 297 6 7035 3.0 4.5 3.8 1.2 7056 chrX 4157904 intron Fas2 - chrX 4161432 intron Fas2 - chrX 4164960 intron Fas2 - chrX_6_4160001 chrX_4160001 RAL-810 2012 chrX 4358085 4358118 chrX 4358187 4358220 9 102 2.0 0.0 1.0 4.5 135 chrX 4358085 intron norpA + chrX 4358152 intron norpA + chrX 4358220 intron norpA + chrX_9_4355001 chrX_4355001 RAL-810 2013 chrX 4361440 4361472 chrX 4361519 4361529 10 77 1.5 3.0 2.2 3.1 89 chrX 4361440 intron norpA + chrX 4361484 intron norpA + chrX 4361529 intron norpA + chrX_10_4360001 chrX_4360001 RAL-810 2014 chrX 4396978 4397090 chrX 4397063 4397152 14 81 0.0 0.5 0.2 11.7 174 chrX 4396978 intron CR32773 - chrX 4397065 intron CR32773 - chrX 4397152 intron CR32773 - chrX_14_4395001 chrX_4395001 RAL-810 2015 chrX 4409140 4409161 chrX 4409225 4409246 9 85 2.0 2.0 2.0 3.0 106 chrX 4409140 intron CR32773 - chrX 4409193 intron CR32773 - chrX 4409246 intron CR32773 - chrX_9_4405001 chrX_4405001 RAL-810 2016 chrX 4757386 4757406 chrX 4757465 4757485 5 79 3.0 1.5 2.2 1.6 99 chrX 4757386 intergenic not near genes chrX 4757436 intergenic not near genes chrX 4757485 intergenic not near genes chrX_5_4755001 chrX_4755001 RAL-810 2017 chrX 4763259 4763283 chrX 4763747 4763770 Stalker4 9 487 1.5 1.5 1.5 3.6 511 chrX 4763259 intergenic not near genes chrX 4763514 intergenic not near genes chrX 4763770 intergenic not near genes chrX_9_4760001 chrX_4760001 RAL-810 2018 chrX 4792382 4792407 chrX 4792815 4792837 jockey 7 433 1.5 3.5 2.5 2.0 455 chrX 4792382 intergenic not near genes chrX 4792610 intergenic not near genes chrX 4792837 intergenic not near genes chrX_7_4790001 chrX_4790001 RAL-810 2019 chrX 4827646 4827680 chrX 4827727 4827756 12 81 3.0 2.5 2.8 3.2 110 chrX 4827646 intergenic not near genes chrX 4827701 intergenic not near genes chrX 4827756 intergenic not near genes chrX_12_4825001 chrX_4825001 RAL-810 2020 chrX 4878879 4878911 chrX 4878988 4879020 5 109 0.5 1.0 0.8 2.8 141 chrX 4878879 intron CG42594 + chrX 4878950 intron CG42594 + chrX 4879020 intron CG42594 + chrX_5_4875001 chrX_4875001 RAL-810 2021 chrX 4893364 4893387 chrX 4893633 4893656 8 269 4.0 3.0 3.5 1.8 292 chrX 4893364 intron CG42594 + chrX 4893510 intron CG42594 + chrX 4893656 intron CG42594 + chrX_8_4890001 chrX_4890001 RAL-810 2022 chrX 4990043 4990077 chrX 4997257 4997291 roo 10 7214 3.0 1.0 2.0 3.3 7248 chrX 4990043 intron CR44833 - chrX 4993667 intron CR44833 - chrX 4997291 intron CR44833 - chrX_10_4990001 chrX_4990001 RAL-810 2023 chrX 5263630 5263654 chrX 5264019 5264039 5 386 0.5 2.5 1.5 2.0 409 chrX 5263630 intergenic not near genes chrX 5263834 intergenic not near genes chrX 5264039 intergenic not near genes chrX_5_5260001 chrX_5260001 RAL-810 2024 chrX 5264700 5264707 chrX 5264786 5264793 4 86 0.5 0.5 0.5 2.7 93 chrX 5264700 intergenic not near genes chrX 5264746 intergenic not near genes chrX 5264793 intergenic not near genes chrX_4_5260001 chrX_5260001 RAL-810 2025 chrX 5272826 5272848 chrX 5272904 5272935 6 85 1.5 0.0 0.8 3.3 109 chrX 5272826 intergenic not near genes chrX 5272880 intergenic not near genes chrX 5272935 intergenic not near genes chrX_6_5270001 chrX_5270001 RAL-810 2026 chrX 5338708 5338719 chrX 5339961 5339972 jockey 5 1253 4.0 0.5 2.2 1.6 1264 chrX 5338708 intergenic not near genes chrX 5339340 intergenic not near genes chrX 5339972 intergenic SK + chrX_5_5335001 chrX_5335001 RAL-810 2027 chrX 5362843 5362850 chrX 5362955 5362962 4 112 4.0 3.0 3.5 0.9 119 chrX 5362843 intron SK + chrX 5362902 intron SK + chrX 5362962 intron SK + chrX_4_5360001 chrX_5360001 RAL-810 2028 chrX 5363635 5363664 chrX 5363722 5363754 9 90 1.5 0.0 0.8 5.0 119 chrX 5363635 intron SK + chrX 5363694 intron SK + chrX 5363754 intron SK + chrX_9_5360001 chrX_5360001 RAL-810 2029 chrX 5441988 5442019 chrX 5442096 5442127 7 106 0.0 1.0 0.5 4.7 139 chrX 5441988 intergenic not near genes chrX 5442058 intergenic not near genes chrX 5442127 intergenic not near genes chrX_7_5440001 chrX_5440001 RAL-810 2030 chrX 5473586 5473620 chrX 5473662 5473674 10 73 1.0 1.5 1.2 4.5 88 chrX 5473586 intron SPR + chrX 5473630 intron SPR + chrX 5473674 intron SPR + chrX_10_5470001 chrX_5470001 RAL-810 2031 chrX 5524849 5524868 chrX 5528712 5528731 412 9 3863 1.0 6.5 3.8 1.9 3882 chrX 5524849 intergenic snoRNA:Psi28S-3342 - chrX 5526790 intergenic not near genes chrX 5528731 intergenic Vsx2 - chrX_9_5525001 chrX_5525001 RAL-810 2032 chrX 5883809 5883840 chrX 5884050 5884081 pogo 10 241 1.5 3.5 2.5 2.9 272 chrX 5883809 intron CR45668 - chrX 5883945 intron CR45668 - chrX 5884081 intron CR45668 - chrX_10_5880001 chrX_5880001 RAL-810 2033 chrX 5884162 5884187 chrX 5884402 5884428 pogo 7 241 3.0 2.0 2.5 2.0 266 chrX 5884162 intron CR45668 - chrX 5884295 intron CR45668 - chrX 5884428 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-810 2034 chrX 6134429 6134450 chrX 6134554 6134575 4 123 1.0 4.5 2.8 1.1 146 chrX 6134429 intron Ca-alpha1T - chrX 6134502 intron Ca-alpha1T - chrX 6134575 intron Ca-alpha1T - chrX_4_6130001 chrX_6130001 RAL-810 2035 chrX 6171581 6171614 chrX 6179014 6179047 Quasimodo 8 7431 1.5 5.0 3.2 1.9 7466 chrX 6171581 intron Ca-alpha1T - chrX 6175314 intron Ca-alpha1T - chrX 6179047 intron Ca-alpha1T - chrX_8_6175001 chrX_6175001 RAL-810 2036 chrX 6198814 6198826 chrX 6198903 6198915 5 89 2.0 3.0 2.5 1.4 101 chrX 6198814 intergenic CG32751 -,CG43090 - chrX 6198864 intergenic CG32751 -,CG43090 - chrX 6198915 intergenic CG32751 -,CG43090 - chrX_5_6195001 chrX_6195001 RAL-810 2037 chrX 6203756 6203784 chrX 6203838 6203866 5 81 0.5 3.0 1.8 1.8 110 chrX 6203756 intergenic not near genes chrX 6203811 intergenic not near genes chrX 6203866 intergenic not near genes chrX_5_6200001 chrX_6200001 RAL-810 2038 chrX 6306557 6306566 chrX 6306632 6306643 5 76 4.0 5.0 4.5 0.9 86 chrX 6306557 3` UTR CG3823 + chrX 6306600 3` UTR CG3823 + chrX 6306643 3` UTR CG3823 + chrX_5_6305001 chrX_6305001 RAL-810 2039 chrX 6306575 6306580 chrX 6306630 6306657 5 68 3.0 5.0 4.0 1.0 82 chrX 6306575 3` UTR CG3823 + chrX 6306616 3` UTR CG3823 + chrX 6306657 3` UTR CG3823 + chrX_5_6305001 chrX_6305001 RAL-810 2040 chrX 6307035 6307069 chrX 6307406 6307439 13 370 0.5 0.5 0.5 8.7 404 chrX 6307035 intergenic CG3823 + chrX 6307237 intergenic CG3823 + chrX 6307439 intergenic not near genes chrX_13_6305001 chrX_6305001 RAL-810 2041 chrX 6315162 6315191 chrX 6315291 6315321 9 128 3.0 3.0 3.0 2.2 159 chrX 6315162 intron CG15894 + chrX 6315242 intron CG15894 + chrX 6315321 intron CG15894 + chrX_9_6315001 chrX_6315001 RAL-810 2042 chrX 6388668 6388685 chrX 6388744 6388761 6 76 3.0 1.5 2.2 1.9 93 chrX 6388668 intergenic not near genes chrX 6388714 intergenic not near genes chrX 6388761 intergenic not near genes chrX_6_6385001 chrX_6385001 RAL-810 2043 chrX 6392882 6392900 chrX 6397646 6397665 Doc 5 4764 1.0 2.5 1.8 1.8 4783 chrX 6392882 intergenic not near genes chrX 6395274 intergenic not near genes chrX 6397665 intergenic not near genes chrX_5_6395001 chrX_6395001 RAL-810 2044 chrX 6445320 6445335 chrX 6451078 6451093 297 7 5758 2.5 3.5 3.0 1.8 5773 chrX 6445320 intron CG42340 - chrX 6448206 intron CG42340 - chrX 6451093 intron CG42340 - chrX_7_6445001 chrX_6445001 RAL-810 2045 chrX 6551720 6551753 chrX 6551800 6551833 7 78 2.5 2.0 2.2 2.2 113 chrX 6551720 intron CG34417 + chrX 6551776 intron CG34417 + chrX 6551833 intron CG34417 + chrX_7_6550001 chrX_6550001 RAL-810 2046 chrX 6629786 6629795 chrX 6629873 6629882 4 87 2.5 1.0 1.8 1.4 96 chrX 6629786 intron pigs + chrX 6629834 intron pigs + chrX 6629882 intron pigs + chrX_4_6625001 chrX_6625001 RAL-810 2047 chrX 6859571 6859576 chrX 6859979 6859989 5 412 6.0 0.5 3.2 1.2 418 chrX 6859571 intron CG14434 - chrX 6859780 intron CG14434 - chrX 6859989 intron CG14434 - chrX_5_6855001 chrX_6855001 RAL-810 2048 chrX 6865789 6865797 chrX 6865870 6865878 5 81 2.0 5.5 3.8 1.0 89 chrX 6865789 intron CG14434 - chrX 6865834 intron CG14434 - chrX 6865878 intron CG14434 - chrX_5_6865001 chrX_6865001 RAL-810 2049 chrX 6897225 6897238 chrX 7441722 7441734 5 544497 4.5 9.5 7.0 0.6 544509 chrX 6897225 intergenic not near genes chrX 7169480 intron,intron CG9650 +,CR44357 - chrX 7441734 intergenic not near genes chrX_5_7165001 chrX_7165001 RAL-810 2050 chrX 6897576 6897584 chrX 7243771 7243779 6 346196 5.5 3.0 4.2 1.2 346203 chrX 6897576 intergenic not near genes chrX 7070678 exon CG4607 + chrX 7243779 intron CR44357 - chrX_6_7070001 chrX_7070001 RAL-810 2051 chrX 6897690 6897706 chrX 6897799 6897815 5 110 1.0 1.0 1.0 2.5 125 chrX 6897690 intergenic not near genes chrX 6897752 intergenic not near genes chrX 6897815 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-810 2052 chrX 6941569 6941595 chrX 6941646 6941672 7 77 1.0 2.0 1.5 2.8 103 chrX 6941569 intron CG14431 + chrX 6941620 intron CG14431 + chrX 6941672 intron CG14431 + chrX_7_6940001 chrX_6940001 RAL-810 2053 chrX 6989503 6989529 chrX 6989590 6989613 4 86 1.0 2.5 1.8 1.4 110 chrX 6989503 intron ogre - chrX 6989558 intron ogre - chrX 6989613 intron ogre - chrX_4_6985001 chrX_6985001 RAL-810 2054 chrX 7067933 7067936 chrX 13592493 13592494 5 6524559 6.0 9.0 7.5 0.6 6524561 chrX 7067933 intergenic not near genes chrX 10330214 3` UTR CG15306 - chrX 13592494 3` UTR Tango13 + chrX_5_10330001 chrX_10330001 RAL-810 2055 chrX 7346841 7346868 chrX 7346920 7346947 5 79 0.5 2.0 1.2 2.3 106 chrX 7346841 intron,intron,3` UTR CR44357 -,CG1677 -,CG15034 - chrX 7346894 intron,intron,3` UTR CR44357 -,CG1677 -,CG15034 - chrX 7346947 intron,intron,3` UTR CR44357 -,CG1677 -,CG15034 - chrX_5_7345001 chrX_7345001 RAL-810 2056 chrX 7570633 7570668 chrX 7570767 7570801 5 134 4.0 2.5 3.2 1.2 168 chrX 7570633 intergenic not near genes chrX 7570717 intergenic not near genes chrX 7570801 intergenic not near genes chrX_5_7570001 chrX_7570001 RAL-810 2057 chrX 7702514 7702524 chrX 7702604 7702616 6 90 0.0 2.0 1.0 3.0 102 chrX 7702514 intron CHES-1-like - chrX 7702565 intron CHES-1-like - chrX 7702616 intron CHES-1-like - chrX_6_7700001 chrX_7700001 RAL-810 2058 chrX 7702899 7702930 chrX 7703338 7703369 jockey 7 439 1.5 3.0 2.2 2.2 470 chrX 7702899 intron CHES-1-like - chrX 7703134 intron CHES-1-like - chrX 7703369 intron CHES-1-like - chrX_7_7700001 chrX_7700001 RAL-810 2059 chrX 7720572 7720576 chrX 7720634 7720658 5 77 1.0 2.0 1.5 2.0 86 chrX 7720572 intergenic not near genes chrX 7720615 intergenic not near genes chrX 7720658 intergenic not near genes chrX_5_7720001 chrX_7720001 RAL-810 2060 chrX 7737160 7737182 chrX 7737242 7737264 9 82 1.5 2.0 1.8 3.2 104 chrX 7737160 5` UTR Tom40 + chrX 7737212 intron Tom40 + chrX 7737264 intron Tom40 + chrX_9_7735001 chrX_7735001 RAL-810 2061 chrX 7845727 7845759 chrX 7847214 7847248 hopper2 5 1490 3.0 3.5 3.2 1.2 1521 chrX 7845727 intergenic not near genes chrX 7846488 intergenic not near genes chrX 7847248 intergenic not near genes chrX_5_7845001 chrX_7845001 RAL-810 2062 chrX 7881854 7881880 chrX 7881936 7881962 8 82 2.0 1.5 1.8 2.9 108 chrX 7881854 intergenic Ir7f -,Ir7e - chrX 7881908 intergenic Ir7f -,Ir7e - chrX 7881962 3` UTR Ir7f - chrX_8_7880001 chrX_7880001 RAL-810 2063 chrX 8031428 8031442 chrX 8035737 8035751 Juan 4 4309 3.5 3.5 3.5 0.9 4323 chrX 8031428 intergenic not near genes chrX 8033590 intergenic not near genes chrX 8035751 3` UTR CG2233 - chrX_4_8030001 chrX_8030001 RAL-810 2064 chrX 8031443 8031460 chrX 8035736 8035769 Juan 8 4307 2.5 3.5 3.0 2.0 4326 chrX 8031443 intergenic not near genes chrX 8033606 intergenic not near genes chrX 8035769 3` UTR CG2233 - chrX_8_8030001 chrX_8030001 RAL-810 2065 chrX 8364860 8364879 chrX 8365255 8365276 BS 6 397 0.0 3.0 1.5 2.4 416 chrX 8364860 intron nAChRalpha3 - chrX 8365068 intron nAChRalpha3 - chrX 8365276 intron nAChRalpha3 - chrX_6_8365001 chrX_8365001 RAL-810 2066 chrX 8513091 8513120 chrX 8513358 8513387 18 267 2.0 2.5 2.2 5.6 296 chrX 8513091 intron CG33181 + chrX 8513239 intron CG33181 + chrX 8513387 intron CG33181 + chrX_18_8510001 chrX_8510001 RAL-810 2067 chrX 8726195 8726201 chrX 8726290 8726298 4 96 3.5 0.5 2.0 1.3 103 chrX 8726195 intergenic CR43297 + chrX 8726246 intergenic CR43297 + chrX 8726298 intergenic CR43297 + chrX_4_8725001 chrX_8725001 RAL-810 2068 chrX 8744292 8744309 chrX 8744444 8744461 7 152 3.5 1.0 2.2 2.2 169 chrX 8744292 intergenic not near genes chrX 8744376 intergenic not near genes chrX 8744461 intergenic not near genes chrX_7_8740001 chrX_8740001 RAL-810 2069 chrX 8888639 8888662 chrX 8888716 8888736 6 76 4.0 2.5 3.2 1.4 97 chrX 8888639 intron Moe - chrX 8888688 intron Moe - chrX 8888736 intron Moe - chrX_6_8885001 chrX_8885001 RAL-810 2070 chrX 8922324 8922361 chrX 8922758 8922794 jockey 10 431 1.0 2.0 1.5 4.0 470 chrX 8922324 intron rdgA + chrX 8922559 intron rdgA + chrX 8922794 intron rdgA + chrX_10_8920001 chrX_8920001 RAL-810 2071 chrX 8948759 8948791 chrX 8956269 8956301 roo 7 7510 2.0 5.0 3.5 1.6 7542 chrX 8948759 intron rdgA + chrX 8952530 intron rdgA + chrX 8956301 intron rdgA + chrX_7_8950001 chrX_8950001 RAL-810 2072 chrX 9062722 9062752 chrX 9062800 9062830 6 78 2.0 1.5 1.8 2.1 108 chrX 9062722 intron CG15365 - chrX 9062776 intron CG15365 - chrX 9062830 intron CG15365 - chrX_6_9060001 chrX_9060001 RAL-810 2073 chrX 9439126 9439142 chrX 9439318 9439334 4 192 3.0 0.5 1.8 1.4 208 chrX 9439126 intron mgl - chrX 9439230 intron mgl - chrX 9439334 intron mgl - chrX_4_9435001 chrX_9435001 RAL-810 2074 chrX 9473850 9473886 chrX 9474085 9474115 7 234 1.0 1.5 1.2 3.2 265 chrX 9473850 intron mgl - chrX 9473982 intron mgl - chrX 9474115 intron mgl - chrX_7_9470001 chrX_9470001 RAL-810 2075 chrX 9508145 9508164 chrX 9509663 9509682 jockey 4 1518 5.0 3.5 4.2 0.8 1537 chrX 9508145 intron CG32700 - chrX 9508914 intron CG32700 - chrX 9509682 intron CG32700 - chrX_4_9505001 chrX_9505001 RAL-810 2076 chrX 9555420 9555451 chrX 9555529 9555556 7 108 3.0 4.0 3.5 1.6 136 chrX 9555420 3` UTR RpS28b + chrX 9555488 3` UTR RpS28b + chrX 9555556 3` UTR RpS28b + chrX_7_9555001 chrX_9555001 RAL-810 2077 chrX 9617005 9617013 chrX 9617084 9617092 4 79 6.0 0.0 3.0 1.0 87 chrX 9617005 intron CG42797 + chrX 9617048 intron CG42797 + chrX 9617092 intron CG42797 + chrX_4_9615001 chrX_9615001 RAL-810 2078 chrX 9758051 9758081 chrX 9758136 9758166 7 85 2.0 1.5 1.8 2.5 115 chrX 9758051 intergenic not near genes chrX 9758108 intergenic not near genes chrX 9758166 intergenic not near genes chrX_7_9755001 chrX_9755001 RAL-810 2079 chrX 9839364 9839374 chrX 9839446 9839456 6 82 4.5 6.5 5.5 0.9 92 chrX 9839364 intron CG32698 + chrX 9839410 intron CG32698 + chrX 9839456 intron CG32698 + chrX_6_9835001 chrX_9835001 RAL-810 2080 chrX 10138216 10138245 chrX 10145720 10145749 412 4 7504 1.5 4.5 3.0 1.0 7533 chrX 10138216 intron,intron RhoU +,CR44894 - chrX 10141982 intron,intron RhoU +,CR44894 - chrX 10145749 intron,intron RhoU +,CR44894 - chrX_4_10140001 chrX_10140001 RAL-810 2081 chrX 10267301 10267333 chrX 10276451 10276483 roo 6 9150 2.0 2.0 2.0 2.0 9182 chrX 10267301 3` UTR alpha-Man-I - chrX 10271892 intron alpha-Man-I - chrX 10276483 3` UTR alpha-Man-I - chrX_6_10270001 chrX_10270001 RAL-810 2082 chrX 10348809 10348827 chrX 10356374 10356382 springer 6 7563 2.5 2.0 2.2 1.9 7573 chrX 10348809 intergenic snoRNA:U3:9B + chrX 10352596 intergenic not near genes chrX 10356382 intergenic l(1)G0289 - chrX_6_10350001 chrX_10350001 RAL-810 2083 chrX 10361710 10361736 chrX 10361807 10361833 6 96 1.0 5.0 3.0 1.5 123 chrX 10361710 intron l(1)G0289 - chrX 10361772 intron l(1)G0289 - chrX 10361833 intron l(1)G0289 - chrX_6_10360001 chrX_10360001 RAL-810 2084 chrX 10550339 10550363 chrX 10550417 10550440 9 78 1.5 2.5 2.0 3.0 101 chrX 10550339 intron spri - chrX 10550390 intron spri - chrX 10550440 intron spri - chrX_9_10550001 chrX_10550001 RAL-810 2085 chrX 10550867 10550880 chrX 10552334 10552346 hobo 5 1466 4.0 1.5 2.8 1.3 1479 chrX 10550867 intron spri - chrX 10551606 intron spri - chrX 10552346 intron spri - chrX_5_10550001 chrX_10550001 RAL-810 2086 chrX 10668669 10668691 chrX 10668936 10668954 5 267 3.0 0.0 1.5 2.0 285 chrX 10668669 intron X11Lbeta + chrX 10668812 intron X11Lbeta + chrX 10668954 intron X11Lbeta + chrX_5_10665001 chrX_10665001 RAL-810 2087 chrX 10686052 10686084 chrX 10691189 10691221 roo 6 5137 1.5 3.0 2.2 1.9 5169 chrX 10686052 intron X11Lbeta + chrX 10688636 intron X11Lbeta + chrX 10691221 intron X11Lbeta + chrX_6_10685001 chrX_10685001 RAL-810 2088 chrX 10694160 10694170 chrX 10694238 10694250 6 79 2.5 3.5 3.0 1.5 90 chrX 10694160 intron X11Lbeta + chrX 10694205 intron X11Lbeta + chrX 10694250 intron X11Lbeta + chrX_6_10690001 chrX_10690001 RAL-810 2089 chrX 10719135 10719151 chrX 10719219 10719235 4 84 0.0 2.5 1.2 1.8 100 chrX 10719135 intron CG32676 - chrX 10719185 intron CG32676 - chrX 10719235 intron CG32676 - chrX_4_10715001 chrX_10715001 RAL-810 2090 chrX 10803037 10803047 chrX 10803121 10803132 5 84 3.0 6.0 4.5 0.9 95 chrX 10803037 intron Imp - chrX 10803084 intron Imp - chrX 10803132 intron Imp - chrX_5_10800001 chrX_10800001 RAL-810 2091 chrX 11062454 11062478 chrX 11062549 11062573 8 95 2.5 1.5 2.0 2.7 119 chrX 11062454 exon CG1537 - chrX 11062514 intron CG1537 - chrX 11062573 intron CG1537 - chrX_8_11060001 chrX_11060001 RAL-810 2092 chrX 11069164 11069188 chrX 11069307 11069331 4 143 2.0 3.5 2.8 1.1 167 chrX 11069164 intergenic not near genes chrX 11069248 intergenic not near genes chrX 11069331 intergenic not near genes chrX_4_11065001 chrX_11065001 RAL-810 2093 chrX 11096003 11096023 chrX 11103105 11103125 HMS-Beagle 4 7102 4.0 5.5 4.8 0.7 7122 chrX 11096003 intergenic not near genes chrX 11099564 intergenic not near genes chrX 11103125 intron CG42249 + chrX_4_11095001 chrX_11095001 RAL-810 2094 chrX 11109417 11109417 chrX 12946233 12946235 4 1836817 8.5 12.5 10.5 0.3 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-810 2095 chrX 11165888 11165897 chrX 11166220 11166229 6 332 2.5 5.0 3.8 1.2 341 chrX 11165888 intergenic not near genes chrX 11166058 intergenic not near genes chrX 11166229 intergenic not near genes chrX_6_11165001 chrX_11165001 RAL-810 2096 chrX 11191895 11191921 chrX 11191973 11191999 9 78 0.5 3.5 2.0 3.0 104 chrX 11191895 intergenic not near genes chrX 11191947 intergenic not near genes chrX 11191999 intergenic not near genes chrX_9_11190001 chrX_11190001 RAL-810 2097 chrX 11205299 11205324 chrX 11205375 11205400 6 76 2.0 0.5 1.2 2.7 101 chrX 11205299 intergenic not near genes chrX 11205350 intergenic not near genes chrX 11205400 intergenic not near genes chrX_6_11205001 chrX_11205001 RAL-810 2098 chrX 11256092 11256113 chrX 11256674 11256696 6 583 2.0 4.0 3.0 1.5 604 chrX 11256092 intron CG44422 - chrX 11256394 intron CG44422 - chrX 11256696 intron CG44422 - chrX_6_11255001 chrX_11255001 RAL-810 2099 chrX 11287172 11287206 chrX 11287258 11287292 7 86 0.0 0.5 0.2 5.8 120 chrX 11287172 intron CG44422 - chrX 11287232 intron CG44422 - chrX 11287292 intron CG44422 - chrX_7_11285001 chrX_11285001 RAL-810 2100 chrX 11291703 11291717 chrX 11291785 11291785 7 79 1.0 3.0 2.0 2.3 82 chrX 11291703 intron CG44422 - chrX 11291744 intron CG44422 - chrX 11291785 intron CG44422 - chrX_7_11290001 chrX_11290001 RAL-810 2101 chrX 11312070 11312093 chrX 11319418 11319446 Stalker2 6 7350 4.0 4.0 4.0 1.2 7376 chrX 11312070 intergenic not near genes chrX 11315758 intergenic not near genes chrX 11319446 intergenic not near genes chrX_6_11315001 chrX_11315001 RAL-810 2102 chrX 11554869 11554890 chrX 11555285 11555306 10 416 19.0 17.5 18.2 0.5 437 chrX 11554869 3` UTR Drak + chrX 11555088 3` UTR CG1572 - chrX 11555306 3` UTR CG1572 - chrX_10_11555001 chrX_11555001 RAL-810 2103 chrX 11558277 11558288 chrX 11558361 11558372 6 84 6.0 0.5 3.2 1.4 95 chrX 11558277 intron CG1572 - chrX 11558324 intron CG1572 - chrX 11558372 intron CG1572 - chrX_6_11555001 chrX_11555001 RAL-810 2104 chrX 11633415 11633450 chrX 11640469 11640504 297 8 7054 1.5 1.5 1.5 3.2 7089 chrX 11633415 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640504 intron Ptp10D + chrX_8_11635001 chrX_11635001 RAL-810 2105 chrX 11645113 11645121 chrX 11648283 11648291 NOF 5 3170 4.5 2.5 3.5 1.1 3178 chrX 11645113 intron Ptp10D + chrX 11646702 intron Ptp10D + chrX 11648291 intron Ptp10D + chrX_5_11645001 chrX_11645001 RAL-810 2106 chrX 11719869 11719905 chrX 11719949 11719984 12 79 3.0 3.0 3.0 3.0 115 chrX 11719869 3` UTR prtp + chrX 11719926 intergenic prtp +,Tango10 + chrX 11719984 intergenic prtp +,Tango10 + chrX_12_11715001 chrX_11715001 RAL-810 2107 chrX 11799017 11799038 chrX 11799103 11799124 7 86 2.5 1.0 1.8 2.5 107 chrX 11799017 intron CkIIbeta + chrX 11799070 intron CkIIbeta + chrX 11799124 intron CkIIbeta + chrX_7_11795001 chrX_11795001 RAL-810 2108 chrX 11917343 11917356 chrX 11917407 11917433 5 73 1.0 4.0 2.5 1.4 90 chrX 11917343 intergenic pot -,CR32661 - chrX 11917388 intergenic pot -,CR32661 - chrX 11917433 intergenic pot -,CR32661 - chrX_5_11915001 chrX_11915001 RAL-810 2109 chrX 11922371 11922382 chrX 11922507 11922518 4 136 3.0 3.0 3.0 1.0 147 chrX 11922371 exon Sclp - chrX 11922444 intron Sclp - chrX 11922518 intron Sclp - chrX_4_11920001 chrX_11920001 RAL-810 2110 chrX 12038095 12038112 chrX 12038287 12038304 8 193 1.0 3.0 2.0 2.7 209 chrX 12038095 intergenic not near genes chrX 12038200 intergenic not near genes chrX 12038304 intergenic not near genes chrX_8_12035001 chrX_12035001 RAL-810 2111 chrX 12421502 12421520 chrX 12421578 12421596 4 76 1.5 1.5 1.5 1.6 94 chrX 12421502 intergenic not near genes chrX 12421549 intergenic not near genes chrX 12421596 intergenic not near genes chrX_4_12420001 chrX_12420001 RAL-810 2112 chrX 12557470 12557491 chrX 12557551 12557571 5 81 0.5 0.0 0.2 4.2 101 chrX 12557470 intron CG43921 - chrX 12557520 intron CG43921 - chrX 12557571 intron CG43921 - chrX_5_12555001 chrX_12555001 RAL-810 2113 chrX 12694183 12694202 chrX 12694264 12694283 4 80 3.0 1.5 2.2 1.2 100 chrX 12694183 intron Smr - chrX 12694233 intron Smr - chrX 12694283 intron Smr - chrX_4_12690001 chrX_12690001 RAL-810 2114 chrX 12737599 12737632 chrX 12737675 12737708 10 73 3.0 2.0 2.5 2.9 109 chrX 12737599 intron Smr - chrX 12737654 intron Smr - chrX 12737708 intron Smr - chrX_10_12735001 chrX_12735001 RAL-810 2115 chrX 12738523 12738540 chrX 12738599 12738616 5 76 3.0 4.0 3.5 1.1 93 chrX 12738523 intron Smr - chrX 12738570 intron Smr - chrX 12738616 intron Smr - chrX_5_12735001 chrX_12735001 RAL-810 2116 chrX 12840505 12840525 chrX 12840670 12840689 5 164 3.0 5.0 4.0 1.0 184 chrX 12840505 intron Pde9 - chrX 12840597 intron Pde9 - chrX 12840689 intron Pde9 - chrX_5_12840001 chrX_12840001 RAL-810 2117 chrX 12912635 12912652 chrX 12912732 12912749 5 97 0.5 2.0 1.2 2.3 114 chrX 12912635 5` UTR CR45625 + chrX 12912692 5` UTR CR45625 + chrX 12912749 5` UTR CR45625 + chrX_5_12910001 chrX_12910001 RAL-810 2118 chrX 12921669 12921683 chrX 12922161 12922176 7 493 6.0 2.5 4.2 1.3 507 chrX 12921669 intron fne + chrX 12921922 intron fne + chrX 12922176 intron fne + chrX_7_12920001 chrX_12920001 RAL-810 2119 chrX 12930598 12930608 chrX 12937714 12937724 HMS-Beagle 4 7116 5.5 9.5 7.5 0.5 7126 chrX 12930598 intron fne + chrX 12934161 intron fne + chrX 12937724 intron fne + chrX_4_12930001 chrX_12930001 RAL-810 2120 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 8.5 12.5 10.5 0.3 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-810 2121 chrX 11109417 11109417 chrX 12946234 12946234 9 1836817 8.5 12.5 10.5 0.8 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_9_12025001 chrX_12025001 RAL-810 2122 chrX 11109417 11109417 chrX 12946235 12946235 6 1836818 8.5 12.5 10.5 0.5 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_6_12025001 chrX_12025001 RAL-810 2123 chrX 12953893 12953925 chrX 12954031 12954063 9 138 0.5 1.0 0.8 5.0 170 chrX 12953893 intron hec - chrX 12953978 intron hec - chrX 12954063 intron hec - chrX_9_12950001 chrX_12950001 RAL-810 2124 chrX 12960763 12960798 chrX 12960843 12960879 10 81 3.5 0.5 2.0 3.3 116 chrX 12960763 3` UTR CG32642 + chrX 12960821 intergenic CG32642 + chrX 12960879 intergenic CG32642 + chrX_10_12960001 chrX_12960001 RAL-810 2125 chrX 3391357 3391359 chrX 13100072 13100074 4 9708715 6.5 3.5 5.0 0.7 9708717 chrX 3391357 intron,3` UTR,3` UTR CR44999 +,dm +,CG12535 - chrX 8245716 intron Trxr-1 + chrX 13100074 intron CG43313 - chrX_4_8245001 chrX_8245001 RAL-810 2126 chrX 13146595 13146612 chrX 13146683 13146700 10 88 4.5 1.5 3.0 2.5 105 chrX 13146595 intron CG32645 + chrX 13146648 intron CG32645 + chrX 13146700 intron CG32645 + chrX_10_13145001 chrX_13145001 RAL-810 2127 chrX 13161693 13161723 chrX 13161770 13161800 8 77 1.0 4.0 2.5 2.3 107 chrX 13161693 3` UTR CG12096 + chrX 13161746 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161800 3` UTR,3` UTR CG12096 +,CG34411 - chrX_8_13160001 chrX_13160001 RAL-810 2128 chrX 13172354 13172379 chrX 13172430 13172455 5 76 1.0 4.0 2.5 1.4 101 chrX 13172354 exon CG34411 - chrX 13172404 intron CG34411 - chrX 13172455 intron CG34411 - chrX_5_13170001 chrX_13170001 RAL-810 2129 chrX 13236894 13236900 chrX 13236979 13236983 4 83 0.0 6.0 3.0 1.0 89 chrX 13236894 intron mew - chrX 13236938 intron mew - chrX 13236983 intron mew - chrX_4_13235001 chrX_13235001 RAL-810 2130 chrX 13269203 13269233 chrX 13269279 13269309 13 76 0.0 0.0 0.0 13.0 106 chrX 13269203 intron HDAC4 - chrX 13269256 intron HDAC4 - chrX 13269309 intron HDAC4 - chrX_13_13265001 chrX_13265001 RAL-810 2131 chrX 13278160 13278184 chrX 13278243 13278267 5 83 3.0 0.0 1.5 2.0 107 chrX 13278160 intron HDAC4 - chrX 13278214 intron HDAC4 - chrX 13278267 intron HDAC4 - chrX_5_13275001 chrX_13275001 RAL-810 2132 chrX 13374838 13374865 chrX 13374918 13374945 8 80 3.0 3.5 3.2 1.9 107 chrX 13374838 intron CG1640 + chrX 13374892 intron CG1640 + chrX 13374945 intron CG1640 + chrX_8_13370001 chrX_13370001 RAL-810 2133 chrX 13401481 13401522 chrX 13401833 13401874 jockey 5 351 3.0 1.0 2.0 1.7 393 chrX 13401481 intergenic CG1673 +,CG12725 - chrX 13401678 intergenic CG12725 -,CG1673 + chrX 13401874 3` UTR CG12725 - chrX_5_13400001 chrX_13400001 RAL-810 2134 chrX 13429469 13429494 chrX 13430618 13430642 jockey 6 1149 0.0 5.0 2.5 1.7 1173 chrX 13429469 intergenic not near genes chrX 13430056 intergenic not near genes chrX 13430642 intergenic not near genes chrX_6_13430001 chrX_13430001 RAL-810 2135 chrX 13442143 13442168 chrX 13442234 13442259 8 90 0.5 1.5 1.0 4.0 116 chrX 13442143 intergenic not near genes chrX 13442201 intergenic not near genes chrX 13442259 intergenic not near genes chrX_8_13440001 chrX_13440001 RAL-810 2136 chrX 13463649 13463668 chrX 13469226 13469245 mdg3 7 5577 4.0 2.0 3.0 1.8 5596 chrX 13463649 intron Neto + chrX 13466447 intron Neto + chrX 13469245 intron Neto + chrX_7_13465001 chrX_13465001 RAL-810 2137 chrX 13470190 13470216 chrX 13470480 13470507 10 290 3.5 3.0 3.2 2.4 317 chrX 13470190 intron Neto + chrX 13470348 intron Neto + chrX 13470507 intron Neto + chrX_10_13470001 chrX_13470001 RAL-810 2138 chrX 13546983 13547012 chrX 13547077 13547101 6 92 2.0 2.0 2.0 2.0 118 chrX 13546983 intergenic not near genes chrX 13547042 intergenic not near genes chrX 13547101 intergenic not near genes chrX_6_13545001 chrX_13545001 RAL-810 2139 chrX 13628448 13628473 chrX 13628532 13628557 5 84 2.5 4.0 3.2 1.2 109 chrX 13628448 intron NFAT + chrX 13628502 intron NFAT + chrX 13628557 intron NFAT + chrX_5_13625001 chrX_13625001 RAL-810 2140 chrX 13642880 13642913 chrX 13642959 13642992 9 78 2.5 1.5 2.0 3.0 112 chrX 13642880 intron NFAT + chrX 13642936 intron NFAT + chrX 13642992 intron NFAT + chrX_9_13640001 chrX_13640001 RAL-810 2141 chrX 13754429 13754463 chrX 13754521 13754555 6 90 5.0 3.5 4.2 1.2 126 chrX 13754429 intron Pdcd4 - chrX 13754492 intron Pdcd4 - chrX 13754555 intron Pdcd4 - chrX_6_13750001 chrX_13750001 RAL-810 2142 chrX 13934295 13934322 chrX 13934378 13934405 8 83 1.5 3.0 2.2 2.5 110 chrX 13934295 intron mamo - chrX 13934350 intron mamo - chrX 13934405 intron mamo - chrX_8_13930001 chrX_13930001 RAL-810 2143 chrX 14105038 14105054 chrX 14114189 14114205 roo 6 9150 3.0 1.5 2.2 1.9 9167 chrX 14105038 intergenic not near genes chrX 14109622 intergenic not near genes chrX 14114205 5` UTR CR44657 + chrX_6_14105001 chrX_14105001 RAL-810 2144 chrX 14142893 14142927 chrX 14142970 14143004 6 77 3.0 2.5 2.8 1.6 111 chrX 14142893 intergenic not near genes chrX 14142948 intergenic not near genes chrX 14143004 intergenic not near genes chrX_6_14140001 chrX_14140001 RAL-810 2145 chrX 14157592 14157619 chrX 14163249 14163276 297 6 5657 2.5 2.0 2.2 1.9 5684 chrX 14157592 intergenic not near genes chrX 14160434 intergenic not near genes chrX 14163276 intergenic not near genes chrX_6_14160001 chrX_14160001 RAL-810 2146 chrX 14169366 14169394 chrX 14169449 14169477 4 82 1.0 2.5 1.8 1.4 111 chrX 14169366 intergenic CG12480 + chrX 14169422 intergenic CG12480 + chrX 14169477 intergenic CG12480 + chrX_4_14165001 chrX_14165001 RAL-810 2147 chrX 14312779 14312802 chrX 14312860 14312883 6 81 0.5 0.0 0.2 5.0 104 chrX 14312779 intergenic not near genes chrX 14312831 intergenic not near genes chrX 14312883 intergenic not near genes chrX_6_14310001 chrX_14310001 RAL-810 2148 chrX 14411262 14411291 chrX 14411340 14411369 7 78 3.5 1.5 2.5 2.0 107 chrX 14411262 intron dpr8 + chrX 14411316 intron dpr8 + chrX 14411369 intron dpr8 + chrX_7_14410001 chrX_14410001 RAL-810 2149 chrX 14516196 14516217 chrX 14516277 14516298 4 81 2.0 1.0 1.5 1.6 102 chrX 14516196 intergenic not near genes chrX 14516247 intergenic not near genes chrX 14516298 intergenic not near genes chrX_4_14515001 chrX_14515001 RAL-810 2150 chrX 14531366 14531382 chrX 14531455 14531471 4 88 2.0 1.0 1.5 1.6 105 chrX 14531366 intergenic not near genes chrX 14531418 intergenic not near genes chrX 14531471 intergenic not near genes chrX_4_14530001 chrX_14530001 RAL-810 2151 chrX 14560271 14560303 chrX 14560355 14560387 8 84 0.0 2.0 1.0 4.0 116 chrX 14560271 intergenic not near genes chrX 14560329 intergenic not near genes chrX 14560387 intergenic not near genes chrX_8_14560001 chrX_14560001 RAL-810 2152 chrX 14636464 14636491 chrX 14641905 14641932 I-element 4 5441 1.5 3.0 2.2 1.2 5468 chrX 14636464 intron NetA - chrX 14639198 intron NetA - chrX 14641932 intron NetA - chrX_4_14635001 chrX_14635001 RAL-810 2153 chrX 14742923 14742945 chrX 14743008 14743029 5 85 1.5 2.0 1.8 1.8 106 chrX 14742923 intron NetB - chrX 14742976 intron NetB - chrX 14743029 intron NetB - chrX_5_14740001 chrX_14740001 RAL-810 2154 chrX 14778034 14778061 chrX 14782831 14782858 Doc 4 4797 2.5 3.5 3.0 1.0 4824 chrX 14778034 intergenic CG5347 + chrX 14780446 intergenic not near genes chrX 14782858 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-810 2155 chrX 14806758 14806781 chrX 14806846 14806869 8 88 0.5 0.0 0.2 6.7 111 chrX 14806758 intron rut - chrX 14806814 intron rut - chrX 14806869 intron rut - chrX_8_14805001 chrX_14805001 RAL-810 2156 chrX 14818776 14818798 chrX 14823980 14824001 copia 4 5204 1.0 5.0 3.0 1.0 5225 chrX 14818776 intron rut - chrX 14821388 intron rut - chrX 14824001 intron rut - chrX_4_14820001 chrX_14820001 RAL-810 2157 chrX 14883597 14883622 chrX 14883672 14883698 4 76 2.5 0.0 1.2 1.8 101 chrX 14883597 intron Flo2 + chrX 14883648 intron Flo2 + chrX 14883698 intron Flo2 + chrX_4_14880001 chrX_14880001 RAL-810 2158 chrX 14890470 14890493 chrX 14890546 14890569 6 74 2.5 0.5 1.5 2.4 99 chrX 14890470 intron,intron Flo2 +,CG9514 - chrX 14890520 intron,intron Flo2 +,CG9514 - chrX 14890569 intron,intron Flo2 +,CG9514 - chrX_6_14890001 chrX_14890001 RAL-810 2159 chrX 14900850 14900880 chrX 14901042 14901070 8 192 3.5 3.0 3.2 1.9 220 chrX 14900850 intron Flo2 + chrX 14900960 intron Flo2 + chrX 14901070 intron Flo2 + chrX_8_14900001 chrX_14900001 RAL-810 2160 chrX 14936858 14936889 chrX 14946115 14946146 roo 13 9257 2.5 2.5 2.5 3.7 9288 chrX 14936858 intron pdgy - chrX 14941502 intron pdgy - chrX 14946146 intron pdgy - chrX_13_14940001 chrX_14940001 RAL-810 2161 chrX 14981730 14981739 chrX 14981809 14981818 5 79 2.5 1.5 2.0 1.7 88 chrX 14981730 intron eag + chrX 14981774 intron eag + chrX 14981818 intron eag + chrX_5_14980001 chrX_14980001 RAL-810 2162 chrX 14991782 14991805 chrX 14991860 14991883 10 78 1.5 2.0 1.8 3.6 101 chrX 14991782 intron eag + chrX 14991832 intron eag + chrX 14991883 intron eag + chrX_10_14990001 chrX_14990001 RAL-810 2163 chrX 15127222 15127233 chrX 15127383 15127394 4 161 4.5 3.5 4.0 0.8 172 chrX 15127222 intron drd + chrX 15127308 intron drd + chrX 15127394 intron drd + chrX_4_15125001 chrX_15125001 RAL-810 2164 chrX 15277638 15277667 chrX 15277721 15277752 6 84 2.5 1.5 2.0 2.0 114 chrX 15277638 intergenic not near genes chrX 15277695 intergenic not near genes chrX 15277752 intergenic not near genes chrX_6_15275001 chrX_15275001 RAL-810 2165 chrX 15394767 15394791 chrX 15394849 15394873 9 82 2.0 3.5 2.8 2.4 106 chrX 15394767 intron Cngl - chrX 15394820 intron Cngl - chrX 15394873 intron Cngl - chrX_9_15390001 chrX_15390001 RAL-810 2166 chrX 15413048 15413085 chrX 15417350 15417387 Juan 13 4299 2.5 1.0 1.8 4.6 4339 chrX 15413048 intron Cngl - chrX 15415218 intron Cngl - chrX 15417387 intron Cngl - chrX_13_15415001 chrX_15415001 RAL-810 2167 chrX 15435693 15435703 chrX 15436126 15436136 rover 4 433 0.0 4.0 2.0 1.3 443 chrX 15435693 intron Cngl - chrX 15435914 intron Cngl - chrX 15436136 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-810 2168 chrX 15497601 15497616 chrX 15497691 15497706 5 90 0.5 2.5 1.5 2.0 105 chrX 15497601 intron,3` UTR Gmap +,CR44888 - chrX 15497654 intron,3` UTR Gmap +,CR44888 - chrX 15497706 intron,3` UTR Gmap +,CR44888 - chrX_5_15495001 chrX_15495001 RAL-810 2169 chrX 15519801 15519827 chrX 15519879 15519905 5 78 2.0 1.0 1.5 2.0 104 chrX 15519801 intron Ac13E - chrX 15519853 intron Ac13E - chrX 15519905 intron Ac13E - chrX_5_15515001 chrX_15515001 RAL-810 2170 chrX 15544838 15544863 chrX 15544915 15544940 7 77 5.0 1.5 3.2 1.7 102 chrX 15544838 intron Ac13E - chrX 15544889 intron Ac13E - chrX 15544940 intron Ac13E - chrX_7_15540001 chrX_15540001 RAL-810 2171 chrX 15548861 15548876 chrX 15549017 15549032 4 156 3.5 2.5 3.0 1.0 171 chrX 15548861 intron Ac13E - chrX 15548946 intron Ac13E - chrX 15549032 intron Ac13E - chrX_4_15545001 chrX_15545001 RAL-810 2172 chrX 15565647 15565667 chrX 15565733 15565753 11 86 1.5 4.0 2.8 2.9 106 chrX 15565647 intergenic not near genes chrX 15565700 intergenic not near genes chrX 15565753 intergenic not near genes chrX_11_15565001 chrX_15565001 RAL-810 2173 chrX 15596098 15596128 chrX 15596232 15596261 6 134 0.5 2.5 1.5 2.4 163 chrX 15596098 intergenic not near genes chrX 15596180 intergenic not near genes chrX 15596261 intergenic not near genes chrX_6_15595001 chrX_15595001 RAL-810 2174 chrX 15634013 15634031 chrX 15634390 15634408 7 377 2.0 3.0 2.5 2.0 395 chrX 15634013 intergenic not near genes chrX 15634210 intergenic not near genes chrX 15634408 intergenic not near genes chrX_7_15630001 chrX_15630001 RAL-810 2175 chrX 15671198 15671207 chrX 15671285 15671294 4 87 3.0 0.0 1.5 1.6 96 chrX 15671198 intergenic CG15646 - chrX 15671246 intergenic CG15646 - chrX 15671294 intergenic CG15646 - chrX_4_15670001 chrX_15670001 RAL-810 2176 chrX 15678050 15678058 chrX 15678127 15678134 4 76 2.5 3.5 3.0 1.0 84 chrX 15678050 intergenic CG12708 + chrX 15678092 intergenic CG12708 + chrX 15678134 intergenic CG12708 + chrX_4_15675001 chrX_15675001 RAL-810 2177 chrX 15818774 15818808 chrX 15818850 15818883 9 74 0.0 2.5 1.2 4.1 109 chrX 15818774 intron sd + chrX 15818828 intron sd + chrX 15818883 intron sd + chrX_9_15815001 chrX_15815001 RAL-810 2178 chrX 15871123 15871141 chrX 15871336 15871354 4 213 2.5 2.5 2.5 1.1 231 chrX 15871123 intron CG16952 + chrX 15871238 intron CG16952 + chrX 15871354 intron CG16952 + chrX_4_15870001 chrX_15870001 RAL-810 2179 chrX 15898439 15898461 chrX 15898593 15898615 6 153 2.5 2.5 2.5 1.7 176 chrX 15898439 intron shi + chrX 15898527 intron shi + chrX 15898615 intron shi + chrX_6_15895001 chrX_15895001 RAL-810 2180 chrX 16207545 16207560 chrX 16207608 16207643 7 80 2.0 4.0 3.0 1.8 98 chrX 16207545 intergenic not near genes chrX 16207594 intergenic not near genes chrX 16207643 intergenic not near genes chrX_7_16205001 chrX_16205001 RAL-810 2181 chrX 16222779 16222801 chrX 16231129 16231151 roo 6 8349 1.0 2.5 1.8 2.1 8372 chrX 16222779 intergenic not near genes chrX 16226965 intergenic not near genes chrX 16231151 intergenic not near genes chrX_6_16225001 chrX_16225001 RAL-810 2182 chrX 16329436 16329449 chrX 16329518 16329518 4 79 0.0 2.0 1.0 2.0 82 chrX 16329436 intron CG9919 - chrX 16329477 intron CG9919 - chrX 16329518 exon CG9919 - chrX_4_16325001 chrX_16325001 RAL-810 2183 chrX 16340685 16340700 chrX 16349842 16349857 roo 7 9157 3.5 3.5 3.5 1.6 9172 chrX 16340685 intergenic Dsp1 + chrX 16345271 intergenic not near genes chrX 16349857 intergenic sl + chrX_7_16345001 chrX_16345001 RAL-810 2184 chrX 16492646 16492677 chrX 16498223 16498254 mdg3 4 5577 3.0 3.5 3.2 1.0 5608 chrX 16492646 intron para - chrX 16495450 intron para - chrX 16498254 intron para - chrX_4_16495001 chrX_16495001 RAL-810 2185 chrX 16529430 16529442 chrX 16529540 16529553 6 111 0.0 2.5 1.2 2.7 123 chrX 16529430 intron para - chrX 16529492 intron para - chrX 16529553 intron para - chrX_6_16525001 chrX_16525001 RAL-810 2186 chrX 16689622 16689653 chrX 16689708 16689708 5 80 2.0 3.5 2.8 1.3 86 chrX 16689622 intron Sep4 - chrX 16689665 intron Sep4 - chrX 16689708 intron Sep4 - chrX_5_16685001 chrX_16685001 RAL-810 2187 chrX 16690451 16690466 chrX 16690530 16690533 6 77 2.0 1.5 1.8 2.1 82 chrX 16690451 intron Sep4 - chrX 16690492 intron Sep4 - chrX 16690533 intron Sep4 - chrX_6_16690001 chrX_16690001 RAL-810 2188 chrX 16785274 16785309 chrX 16785378 16785413 5 104 1.5 1.5 1.5 2.0 139 chrX 16785274 3` UTR CG9609 - chrX 16785344 3` UTR CG9609 - chrX 16785413 3` UTR CG9609 - chrX_5_16785001 chrX_16785001 RAL-810 2189 chrX 16936013 16936032 chrX 16936430 16936450 jockey 6 418 0.0 3.0 1.5 2.4 437 chrX 16936013 intron CG4928 + chrX 16936232 intron CG4928 + chrX 16936450 intron CG4928 + chrX_6_16935001 chrX_16935001 RAL-810 2190 chrX 16982871 16982885 chrX 16982983 16982997 4 112 2.5 1.5 2.0 1.3 126 chrX 16982871 intron CG45002 - chrX 16982934 intron CG45002 - chrX 16982997 intron CG45002 - chrX_4_16980001 chrX_16980001 RAL-810 2191 chrX 16983076 16983077 chrX 19404963 19404966 6 2421887 7.0 6.5 6.8 0.8 2421890 chrX 16983076 intron CG45002 - chrX 18194021 intron Frq2 + chrX 19404966 intron kek5 + chrX_6_18190001 chrX_18190001 RAL-810 2192 chrX 17088192 17088200 chrX 17088785 17088793 5 593 0.0 3.5 1.8 1.8 601 chrX 17088192 intergenic not near genes chrX 17088492 intergenic not near genes chrX 17088793 intergenic not near genes chrX_5_17085001 chrX_17085001 RAL-810 2193 chrX 17195214 17195237 chrX 17200299 17200321 flea 6 5084 4.5 4.0 4.2 1.2 5107 chrX 17195214 3` UTR baz + chrX 17197768 3` UTR baz + chrX 17200321 3` UTR baz + chrX_6_17195001 chrX_17195001 RAL-810 2194 chrX 17367526 17367557 chrX 17367734 17367765 4 208 2.0 2.0 2.0 1.3 239 chrX 17367526 intergenic not near genes chrX 17367646 intergenic not near genes chrX 17367765 intergenic not near genes chrX_4_17365001 chrX_17365001 RAL-810 2195 chrX 17389642 17389657 chrX 17389731 17389746 4 89 1.0 4.0 2.5 1.1 104 chrX 17389642 intergenic not near genes chrX 17389694 intergenic not near genes chrX 17389746 intergenic not near genes chrX_4_17385001 chrX_17385001 RAL-810 2196 chrX 17429503 17429522 chrX 17430636 17430656 5 1134 1.5 2.5 2.0 1.7 1153 chrX 17429503 intron CG12994 - chrX 17430080 intron CG12994 - chrX 17430656 intron CG12994 - chrX_5_17430001 chrX_17430001 RAL-810 2197 chrX 17545003 17545032 chrX 17545085 17545114 6 81 5.5 1.5 3.5 1.3 111 chrX 17545003 intron CG43658 - chrX 17545058 intron CG43658 - chrX 17545114 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-810 2198 chrX 17586431 17586452 chrX 17586536 17586557 7 104 4.0 4.0 4.0 1.4 126 chrX 17586431 intron CG12991 + chrX 17586494 intron CG12991 + chrX 17586557 intron CG12991 + chrX_7_17585001 chrX_17585001 RAL-810 2199 chrX 17792949 17792975 chrX 17796247 17796273 flea 6 3298 3.5 2.5 3.0 1.5 3324 chrX 17792949 intron OdsH + chrX 17794611 intron OdsH + chrX 17796273 intron OdsH + chrX_6_17790001 chrX_17790001 RAL-810 2200 chrX 18040435 18040461 chrX 18040523 18040549 6 88 1.0 3.0 2.0 2.0 114 chrX 18040435 intron Sh - chrX 18040492 intron Sh - chrX 18040549 intron Sh - chrX_6_18040001 chrX_18040001 RAL-810 2201 chrX 18122818 18122849 chrX 18122894 18122925 10 76 2.0 5.0 3.5 2.2 107 chrX 18122818 5` UTR CR45606 + chrX 18122872 5` UTR CR45606 + chrX 18122925 intergenic CR45606 + chrX_10_18120001 chrX_18120001 RAL-810 2202 chrX 18126599 18126825 chrX 18126722 18126902 13 102 3.0 2.5 2.8 3.4 303 chrX 18126599 intron CG32553 - chrX 18126750 intron CG32553 - chrX 18126902 intron CG32553 - chrX_13_18125001 chrX_18125001 RAL-810 2203 chrX 18177034 18177058 chrX 18177126 18177151 6 92 2.5 2.5 2.5 1.7 117 chrX 18177034 intergenic not near genes chrX 18177092 intergenic not near genes chrX 18177151 intergenic Frq2 + chrX_6_18175001 chrX_18175001 RAL-810 2204 chrX 18429492 18429527 chrX 18434803 18434838 Transpac 7 5311 2.5 4.5 3.5 1.6 5346 chrX 18429492 intergenic not near genes chrX 18432165 intergenic not near genes chrX 18434838 intergenic not near genes chrX_7_18430001 chrX_18430001 RAL-810 2205 chrX 18486118 18486137 chrX 18486205 18486225 6 88 2.0 4.0 3.0 1.5 107 chrX 18486118 exon psh - chrX 18486172 intron psh - chrX 18486225 intron psh - chrX_6_18485001 chrX_18485001 RAL-810 2206 chrX 18524355 18524375 chrX 18524434 18524454 7 79 1.5 2.5 2.0 2.3 99 chrX 18524355 intron Bx + chrX 18524404 intron Bx + chrX 18524454 intron Bx + chrX_7_18520001 chrX_18520001 RAL-810 2207 chrX 18558778 18558802 chrX 18558860 18558884 5 82 2.0 1.5 1.8 1.8 106 chrX 18558778 intron Bx + chrX 18558831 intron Bx + chrX 18558884 intron Bx + chrX_5_18555001 chrX_18555001 RAL-810 2208 chrX 12946235 12946235 chrX 18572525 18572525 4 5626290 13.0 12.0 12.5 0.3 5626290 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-810 2209 chrX 18574793 18574818 chrX 18574873 18574898 7 80 3.0 2.0 2.5 2.0 105 chrX 18574793 intergenic not near genes chrX 18574846 intergenic not near genes chrX 18574898 intergenic not near genes chrX_7_18570001 chrX_18570001 RAL-810 2210 chrX 18645013 18645049 chrX 18645111 18645146 9 98 1.5 4.0 2.8 2.4 133 chrX 18645013 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645146 intron Rip11 - chrX_9_18645001 chrX_18645001 RAL-810 2211 chrX 18688246 18688276 chrX 18688369 18688399 7 123 1.0 2.0 1.5 2.8 153 chrX 18688246 3` UTR phm + chrX 18688322 3` UTR phm + chrX 18688399 3` UTR phm + chrX_7_18685001 chrX_18685001 RAL-810 2212 chrX 18749890 18749902 chrX 18749974 18749985 4 84 0.5 4.5 2.5 1.1 95 chrX 18749890 intergenic not near genes chrX 18749938 intergenic not near genes chrX 18749985 intergenic not near genes chrX_4_18745001 chrX_18745001 RAL-810 2213 chrX 18760910 18760925 chrX 18761762 18761774 5 850 11.5 9.0 10.2 0.4 864 chrX 18760910 intergenic not near genes chrX 18761342 intergenic not near genes chrX 18761774 intergenic not near genes chrX_5_18760001 chrX_18760001 RAL-810 2214 chrX 18896520 18896544 chrX 18896631 18896655 5 111 2.5 3.5 3.0 1.2 135 chrX 18896520 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896655 intergenic CG7349 + chrX_5_18895001 chrX_18895001 RAL-810 2215 chrX 18896919 18896940 chrX 18896996 18897016 7 75 1.5 4.0 2.8 1.8 97 chrX 18896919 intergenic CG7349 + chrX 18896968 intergenic CG7349 + chrX 18897016 intergenic CG7349 + chrX_7_18895001 chrX_18895001 RAL-810 2216 chrX 18903641 18903672 chrX 18903750 18903780 15 109 3.0 1.5 2.2 4.7 139 chrX 18903641 intron CG7378 + chrX 18903710 intron CG7378 + chrX 18903780 intron CG7378 + chrX_15_18900001 chrX_18900001 RAL-810 2217 chrX 18910177 18910199 chrX 18910256 18910278 8 79 4.5 1.5 3.0 2.0 101 chrX 18910177 3` UTR CG7378 + chrX 18910228 3` UTR CG7378 + chrX 18910278 3` UTR CG7378 + chrX_8_18910001 chrX_18910001 RAL-810 2218 chrX 18957070 18957098 chrX 18965732 18965761 roo 8 8663 2.5 3.5 3.0 2.0 8691 chrX 18957070 intron CG43759 + chrX 18961416 intron CG43759 + chrX 18965761 intron CG43759 + chrX_8_18960001 chrX_18960001 RAL-810 2219 chrX 18988300 18988332 chrX 18988457 18988493 8 158 1.0 0.0 0.5 5.3 193 chrX 18988300 intron CG43759 + chrX 18988396 intron CG43759 + chrX 18988493 intron CG43759 + chrX_8_18985001 chrX_18985001 RAL-810 2220 chrX 19014362 19014390 chrX 19014441 19014469 8 76 2.5 1.0 1.8 2.9 107 chrX 19014362 intron CG43759 + chrX 19014416 intron CG43759 + chrX 19014469 intron CG43759 + chrX_8_19010001 chrX_19010001 RAL-810 2221 chrX 19020595 19020621 chrX 19020673 19020699 10 78 0.0 1.0 0.5 6.7 104 chrX 19020595 intron CG43759 + chrX 19020647 intron CG43759 + chrX 19020699 intron CG43759 + chrX_10_19020001 chrX_19020001 RAL-810 2222 chrX 19060407 19060434 chrX 19065191 19065218 Doc 8 4784 4.0 5.0 4.5 1.5 4811 chrX 19060407 intron CG14190 + chrX 19062812 intron CG14190 + chrX 19065218 intron CG14190 + chrX_8_19060001 chrX_19060001 RAL-810 2223 chrX 19080324 19080358 chrX 19080429 19080464 10 106 3.0 3.0 3.0 2.5 140 chrX 19080324 intergenic not near genes chrX 19080394 intergenic not near genes chrX 19080464 intergenic not near genes chrX_10_19080001 chrX_19080001 RAL-810 2224 chrX 19099666 19099683 chrX 19099749 19099765 6 83 1.5 1.0 1.2 2.7 99 chrX 19099666 intergenic not near genes chrX 19099716 intergenic not near genes chrX 19099765 intergenic not near genes chrX_6_19095001 chrX_19095001 RAL-810 2225 chrX 19124439 19124458 chrX 19124527 19124542 5 87 0.5 3.5 2.0 1.7 103 chrX 19124439 intergenic CG15882 - chrX 19124490 intergenic CG15882 - chrX 19124542 intergenic CG15882 -,tgy - chrX_5_19120001 chrX_19120001 RAL-810 2226 chrX 13057298 13057300 chrX 19242812 19242814 16 6185514 12.0 15.5 13.8 1.1 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_16_16150001 chrX_16150001 RAL-810 2227 chrX 19339743 19339773 chrX 19339819 19339849 10 76 2.5 1.0 1.8 3.6 106 chrX 19339743 intron nAChRalpha7 - chrX 19339796 intron nAChRalpha7 - chrX 19339849 intron nAChRalpha7 - chrX_10_19335001 chrX_19335001 RAL-810 2228 chrX 16983076 16983077 chrX 19404965 19404965 4 2421889 7.0 6.5 6.8 0.5 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-810 2229 chrX 19472126 19472155 chrX 19472696 19472701 jockey 7 566 3.5 2.5 3.0 1.8 575 chrX 19472126 intergenic kek5 + chrX 19472414 intergenic kek5 + chrX 19472701 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-810 2230 chrX 19576559 19576587 chrX 19576637 19576665 8 78 2.0 2.5 2.2 2.5 106 chrX 19576559 intron Tao - chrX 19576612 intron Tao - chrX 19576665 intron Tao - chrX_8_19575001 chrX_19575001 RAL-810 2231 chrX 19662032 19662057 chrX 19662255 19662280 10 223 0.5 4.0 2.2 3.1 248 chrX 19662032 intron CG14223 - chrX 19662156 intron CG14223 - chrX 19662280 intron CG14223 - chrX_10_19660001 chrX_19660001 RAL-810 2232 chrX 19710074 19710101 chrX 19711860 19711886 S-element 5 1786 2.5 3.0 2.8 1.3 1812 chrX 19710074 intron meso18E - chrX 19710980 intron meso18E - chrX 19711886 intron meso18E - chrX_5_19710001 chrX_19710001 RAL-810 2233 chrX 19755537 19755558 chrX 19755622 19755643 13 84 2.5 3.5 3.0 3.2 106 chrX 19755537 intron Pmp70 + chrX 19755590 intron Pmp70 + chrX 19755643 intron Pmp70 + chrX_13_19755001 chrX_19755001 RAL-810 2234 chrX 19881456 19881478 chrX 19881537 19881559 7 80 5.0 2.0 3.5 1.6 103 chrX 19881456 intron Hers + chrX 19881508 intron Hers + chrX 19881559 intron Hers + chrX_7_19880001 chrX_19880001 RAL-810 2235 chrX 19884103 19884122 chrX 19884172 19884183 5 70 0.5 1.5 1.0 2.5 80 chrX 19884103 intron Hers + chrX 19884143 intron Hers + chrX 19884183 intron Hers + chrX_5_19880001 chrX_19880001 RAL-810 2236 chrX 19983863 19983878 chrX 19983942 19983958 7 80 4.5 0.0 2.2 2.2 95 chrX 19983863 intergenic not near genes chrX 19983910 intergenic not near genes chrX 19983958 intergenic not near genes chrX_7_19980001 chrX_19980001 RAL-810 2237 chrX 20041538 20041565 chrX 20041618 20041645 6 80 1.5 4.0 2.8 1.6 107 chrX 20041538 intron Dop2R - chrX 20041592 intron Dop2R - chrX 20041645 intron Dop2R - chrX_6_20040001 chrX_20040001 RAL-810 2238 chrX 20312881 20312907 chrX 20312959 20312985 4 77 0.0 2.0 1.0 2.0 104 chrX 20312881 intron CG1504 - chrX 20312933 intron CG1504 - chrX 20312985 intron CG1504 - chrX_4_20310001 chrX_20310001 RAL-810 2239 chrX 20331937 20331969 chrX 20332033 20332064 7 96 1.0 1.5 1.2 3.2 127 chrX 20331937 intergenic not near genes chrX 20332000 intergenic not near genes chrX 20332064 intergenic not near genes chrX_7_20330001 chrX_20330001 RAL-810 2240 chrX 20358842 20358849 chrX 20358926 20358933 5 84 3.5 2.0 2.8 1.3 91 chrX 20358842 intergenic not near genes chrX 20358888 intergenic not near genes chrX 20358933 intergenic not near genes chrX_5_20355001 chrX_20355001 RAL-810 2241 chrX 20369322 20369336 chrX 20369406 20369420 4 84 2.0 2.5 2.2 1.2 98 chrX 20369322 intergenic not near genes chrX 20369371 intergenic not near genes chrX 20369420 intergenic not near genes chrX_4_20365001 chrX_20365001 RAL-810 2242 chrX 20374106 20374127 chrX 20374182 20374203 5 76 1.0 5.0 3.0 1.2 97 chrX 20374106 intergenic not near genes chrX 20374154 intergenic not near genes chrX 20374203 intergenic not near genes chrX_5_20370001 chrX_20370001 RAL-810 2243 chrX 20415074 20415083 chrX 20415150 20415159 5 76 1.5 2.5 2.0 1.7 85 chrX 20415074 intergenic not near genes chrX 20415116 intergenic not near genes chrX 20415159 intergenic not near genes chrX_5_20415001 chrX_20415001 RAL-810 2244 chrX 20468013 20468032 chrX 20468101 20468121 11 89 4.5 0.0 2.2 3.4 108 chrX 20468013 intron GstT3 + chrX 20468067 intron GstT3 + chrX 20468121 intron GstT3 + chrX_11_20465001 chrX_20465001 RAL-810 2245 chrX 20493916 20493930 chrX 20494077 20494091 9 161 0.0 2.0 1.0 4.5 175 chrX 20493916 intron RhoGAP19D - chrX 20494004 intron RhoGAP19D - chrX 20494091 intron RhoGAP19D - chrX_9_20490001 chrX_20490001 RAL-810 2246 chrX 20504136 20504155 chrX 20505657 20505675 transib2 8 1521 2.0 3.5 2.8 2.1 1539 chrX 20504136 intron RhoGAP19D - chrX 20504906 intron RhoGAP19D - chrX 20505675 intron RhoGAP19D - chrX_8_20500001 chrX_20500001 RAL-810 2247 chrX 20540150 20540164 chrX 20540233 20540248 5 84 1.5 1.5 1.5 2.0 98 chrX 20540150 intron RunxB + chrX 20540199 intron RunxB + chrX 20540248 intron RunxB + chrX_5_20540001 chrX_20540001 RAL-810 2248 chrX 20940718 20940739 chrX 20942187 20942208 hobo 5 1468 3.0 1.0 2.0 1.7 1490 chrX 20940718 intergenic not near genes chrX 20941463 intergenic not near genes chrX 20942208 intergenic not near genes chrX_5_20940001 chrX_20940001 RAL-810 2249 chrX 20956988 20957010 chrX 20962430 20962452 I-element 9 5442 3.0 3.0 3.0 2.2 5464 chrX 20956988 intergenic not near genes chrX 20959720 intergenic not near genes chrX 20962452 intergenic Ser6 - chrX_9_20955001 chrX_20955001 RAL-810 2250 chrX 21008664 21008685 chrX 21008751 21008772 8 87 0.0 0.0 0.0 8.0 108 chrX 21008664 intergenic not near genes chrX 21008718 intergenic not near genes chrX 21008772 intergenic not near genes chrX_8_21005001 chrX_21005001 RAL-810 2251 chrX 21018818 21018838 chrX 21018977 21019000 6 161 3.0 0.5 1.8 2.1 182 chrX 21018818 intergenic not near genes chrX 21018909 intergenic not near genes chrX 21019000 intergenic not near genes chrX_6_21015001 chrX_21015001 RAL-810 2252 chrX 21029169 21029179 chrX 21029386 21029392 5 216 0.0 6.0 3.0 1.2 223 chrX 21029169 3` UTR CG1529 - chrX 21029280 3` UTR CG1529 - chrX 21029392 3` UTR CG1529 - chrX_5_21025001 chrX_21025001 RAL-810 2253 chrX 21055690 21055726 chrX 21055766 21055801 8 76 1.0 1.0 1.0 4.0 111 chrX 21055690 intron bves + chrX 21055746 intron bves + chrX 21055801 intron bves + chrX_8_21055001 chrX_21055001 RAL-810 2254 chrX 21086134 21086165 chrX 21087163 21087194 jockey 7 1028 2.0 3.5 2.8 1.8 1060 chrX 21086134 intergenic not near genes chrX 21086664 intergenic not near genes chrX 21087194 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-810 2255 chrX 21089146 21089173 chrX 21089239 21089267 11 94 3.0 1.0 2.0 3.7 121 chrX 21089146 intergenic not near genes chrX 21089206 intergenic not near genes chrX 21089267 intergenic not near genes chrX_11_21085001 chrX_21085001 RAL-810 2256 chrX 21098882 21098898 chrX 21099041 21099057 5 159 3.5 2.0 2.8 1.3 175 chrX 21098882 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX 21098970 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX 21099057 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX_5_21095001 chrX_21095001 RAL-810 2257 chrX 21247889 21247912 chrX 21247995 21248024 10 111 2.5 2.0 2.2 3.1 135 chrX 21247889 intron CG32521 - chrX 21247956 intron CG32521 - chrX 21248024 intron CG32521 - chrX_10_21245001 chrX_21245001 RAL-810 2258 chrX 21328117 21328139 chrX 21328228 21328250 5 111 1.5 1.5 1.5 2.0 133 chrX 21328117 3` UTR CG1486 + chrX 21328184 intergenic CG1486 +,tty - chrX 21328250 intergenic CG1486 +,tty - chrX_5_21325001 chrX_21325001 RAL-810 2259 chrX 21668259 21668290 chrX 21668344 21668375 7 83 1.0 2.0 1.5 2.8 116 chrX 21668259 intergenic not near genes chrX 21668317 intergenic not near genes chrX 21668375 intergenic not near genes chrX_7_21665001 chrX_21665001 RAL-810 2260 chrX 22448273 22448293 chrX 22448412 22448432 4 139 2.5 3.5 3.0 1.0 159 chrX 22448273 intron CG14615 - chrX 22448352 intron CG14615 - chrX 22448432 intron CG14615 - chrX_4_22445001 chrX_22445001 RAL-810 2261 chrX 22522640 22522650 chrX 22525460 22525470 NOF 6 2820 3.0 0.0 1.5 2.4 2830 chrX 22522640 intron CG17600 + chrX 22524055 intron CG17600 + chrX 22525470 intron CG17600 + chrX_6_22520001 chrX_22520001 RAL-810 2262 chrX 22564559 22564574 chrX 22575131 22575146 jockey 4 10572 9.0 5.5 7.2 0.5 10587 chrX 22564559 intergenic not near genes chrX 22569852 intergenic not near genes chrX 22575146 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-810 2263 chrX 22660579 22660595 chrX 22660663 22660679 4 84 1.0 4.5 2.8 1.1 100 chrX 22660579 intron CR44997 + chrX 22660629 intron CR44997 + chrX 22660679 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-810 2264 chrX 22677294 22677324 chrX 22677503 22677532 4 209 3.5 0.0 1.8 1.4 238 chrX 22677294 intron CR44997 + chrX 22677413 intron CR44997 + chrX 22677532 intron CR44997 + chrX_4_22675001 chrX_22675001 RAL-810 2265 chrX 22697495 22697516 chrX 22701791 22701813 Juan 7 4297 8.0 3.5 5.8 1.0 4318 chrX 22697495 intron CR44997 + chrX 22699654 intron CR44997 + chrX 22701813 intron CR44997 + chrX_7_22695001 chrX_22695001 RAL-810 2266 chrX 22764374 22764396 chrX 22764470 22764492 6 96 1.0 2.5 1.8 2.1 118 chrX 22764374 intron CR44997 + chrX 22764433 intron CR44997 + chrX 22764492 intron CR44997 + chrX_6_22760001 chrX_22760001 RAL-810 2267 chrX 22798774 22798799 chrX 22798889 22798916 5 116 0.5 1.5 1.0 2.5 142 chrX 22798774 intergenic not near genes chrX 22798845 intergenic not near genes chrX 22798916 intergenic not near genes chrX_5_22795001 chrX_22795001 RAL-810 2268 chrX 22811991 22812002 chrX 22816764 22816775 F-element 5 4773 5.0 3.0 4.0 1.0 4784 chrX 22811991 intergenic CG12446 - chrX 22814383 intergenic not near genes chrX 22816775 intergenic not near genes chrX_5_22810001 chrX_22810001 RAL-810 2269 chrX 22922514 22922548 chrX 22922594 22922627 6 80 1.5 1.0 1.2 2.7 113 chrX 22922514 intergenic not near genes chrX 22922570 intergenic not near genes chrX 22922627 intergenic not near genes chrX_6_22920001 chrX_22920001 RAL-810 2270 chrX 22967392 22967409 chrX 23154543 23154560 diver 5 187151 1.0 9.5 5.2 0.8 187168 chrX 22967392 intergenic not near genes chrX 23060976 intergenic not near genes chrX 23154560 intergenic not near genes chrX_5_23060001 chrX_23060001 RAL-810 2271 chrX 22987103 22987133 chrX 22989762 22989792 Burdock 6 2659 2.0 1.5 1.8 2.1 2689 chrX 22987103 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989792 intron,intron stnA -,stnB - chrX_6_22985001 chrX_22985001 RAL-810 2272 chrX 22992393 22992425 chrX 22992524 22992556 8 131 4.5 1.5 3.0 2.0 163 chrX 22992393 intron,intron stnA -,stnB - chrX 22992474 intron,intron stnA -,stnB - chrX 22992556 intron,intron stnA -,stnB - chrX_8_22990001 chrX_22990001 RAL-810 2273 chrX 22996314 22996340 chrX 23003546 23003572 roo 5 7232 2.5 2.0 2.2 1.6 7258 chrX 22996314 intron,intron stnA -,stnB - chrX 22999943 intron,intron stnA -,stnB - chrX 23003572 intron,intron stnA -,stnB - chrX_5_22995001 chrX_22995001 RAL-810 2274 chrX 23036381 23036410 chrX 23037782 23037811 pogo 6 1401 5.0 3.0 4.0 1.2 1430 chrX 23036381 intron CG12061 + chrX 23037096 intron CG12061 + chrX 23037811 intron CG12061 + chrX_6_23035001 chrX_23035001 RAL-810 2275 chrX 22892368 22892375 chrX 23039012 23039019 4 146644 2.0 7.5 4.8 0.7 146651 chrX 22892368 intergenic not near genes chrX 22965694 intergenic not near genes chrX 23039019 intron CG12061 + chrX_4_22965001 chrX_22965001 RAL-810 2276 chrY 975601 975817 chrY 975718 975968 6 94 60.0 54.5 57.2 0.1 367 chrY 975601 intergenic not near genes chrY 975784 intergenic not near genes chrY 975968 intergenic not near genes chrY_6_975001 chrY_975001 RAL-810 2277 chrY 1420639 1420648 chrY 1420785 1420794 4 146 5.5 9.0 7.2 0.5 155 chrY 1420639 intergenic not near genes chrY 1420716 intergenic not near genes chrY 1420794 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-810 2278 chrY 1431370 1431372 chrY 1447406 1447408 Doc 4 16036 6.5 5.5 6.0 0.6 16038 chrY 1431370 intergenic not near genes chrY 1439389 intergenic not near genes chrY 1447408 intergenic not near genes chrY_4_1435001 chrY_1435001 RAL-810