SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 89720 89727 chr2L 89797 89802 4 76 5.0 2.5 3.8 0.8 82 chr2L 89720 intergenic not near genes chr2L 89761 intergenic not near genes chr2L 89802 intergenic not near genes chr2L_4_85001 chr2L_85001 RAL-808_75b 2 chr2L 89738 89745 chr2L 89789 89812 4 56 2.0 2.0 2.0 1.3 74 chr2L 89738 intergenic not near genes chr2L 89775 intergenic not near genes chr2L 89812 intergenic not near genes chr2L_4_85001 chr2L_85001 RAL-808_75b 3 chr2L 179470 179486 chr2L 179539 179549 6 71 2.0 2.5 2.2 1.9 79 chr2L 179470 intron spen + chr2L 179510 intron spen + chr2L 179549 intron spen + chr2L_6_175001 chr2L_175001 RAL-808_75b 4 chr2L 263302 263315 chr2L 263448 263448 5 143 2.0 4.0 3.0 1.2 146 chr2L 263302 intron,3` UTR CG3645 -,CG17075 - chr2L 263375 intron,3` UTR CG3645 -,CG17075 - chr2L 263448 intron,3` UTR CG3645 -,CG17075 - chr2L_5_260001 chr2L_260001 RAL-808_75b 5 chr2L 297686 297713 chr2L 297784 297796 5 86 2.0 2.0 2.0 1.7 110 chr2L 297686 intergenic Pi3K21B +,Hop + chr2L 297741 intergenic Pi3K21B +,Hop + chr2L 297796 intergenic Pi3K21B +,Hop + chr2L_5_295001 chr2L_295001 RAL-808_75b 6 chr2L 301092 301123 chr2L 301247 301268 6 151 5.0 2.0 3.5 1.3 176 chr2L 301092 intron Pi3K21B + chr2L 301180 intron Pi3K21B + chr2L 301268 intron Pi3K21B + chr2L_6_300001 chr2L_300001 RAL-808_75b 7 chr2L 314144 314159 chr2L 314202 314215 5 59 3.0 3.0 3.0 1.2 71 chr2L 314144 intron Plc21C + chr2L 314180 intron Plc21C + chr2L 314215 intron Plc21C + chr2L_5_310001 chr2L_310001 RAL-808_75b 8 chr2L 323457 323474 chr2L 323534 323551 6 74 3.5 4.0 3.8 1.2 94 chr2L 323457 intron Plc21C + chr2L 323504 intron Plc21C + chr2L 323551 intron Plc21C + chr2L_6_320001 chr2L_320001 RAL-808_75b 9 chr2L 325143 325150 chr2L 325206 325207 4 63 4.5 5.0 4.8 0.7 64 chr2L 325143 intron Plc21C + chr2L 325175 intron Plc21C + chr2L 325207 intron Plc21C + chr2L_4_325001 chr2L_325001 RAL-808_75b 10 chr2L 347885 347913 chr2L 355384 355413 blood 5 7496 2.0 1.5 1.8 1.8 7528 chr2L 347885 3` UTR Plc21C + chr2L 351649 intron Plc21C + chr2L 355413 3` UTR Plc21C + chr2L_5_350001 chr2L_350001 RAL-808_75b 11 chr2L 590621 590648 chr2L 590721 590749 8 93 3.5 5.5 4.5 1.5 128 chr2L 590621 intron Gsc - chr2L 590685 intron Gsc - chr2L 590749 intron Gsc - chr2L_8_590001 chr2L_590001 RAL-808_75b 12 chr2L 722784 722808 chr2L 722860 722883 11 71 4.5 6.5 5.5 1.7 99 chr2L 722784 intergenic not near genes chr2L 722834 intergenic not near genes chr2L 722883 intergenic not near genes chr2L_11_720001 chr2L_720001 RAL-808_75b 13 chr2L 741248 741268 chr2L 744792 744821 14 3545 20.0 16.5 18.2 0.7 3573 chr2L 741248 intron Eaat2 - chr2L 743034 intron Eaat2 - chr2L 744821 intergenic Eaat2 - chr2L_14_740001 chr2L_740001 RAL-808_75b 14 chr2L 753829 753844 chr2L 753913 753933 7 86 4.5 3.5 4.0 1.4 104 chr2L 753829 intron GABA-B-R3 + chr2L 753881 intron GABA-B-R3 + chr2L 753933 intron GABA-B-R3 + chr2L_7_750001 chr2L_750001 RAL-808_75b 15 chr2L 764589 764592 chr2L 764643 764668 4 72 3.5 2.5 3.0 1.0 79 chr2L 764589 intergenic not near genes chr2L 764628 intergenic not near genes chr2L 764668 intergenic not near genes chr2L_4_760001 chr2L_760001 RAL-808_75b 16 chr2L 770471 770479 chr2L 772244 772260 Bari1 4 1776 5.5 3.0 4.2 0.8 1789 chr2L 770471 intergenic not near genes chr2L 771366 intergenic not near genes chr2L 772260 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-808_75b 17 chr2L 775779 775798 chr2L 775841 775864 5 63 4.5 3.0 3.8 1.0 85 chr2L 775779 intergenic not near genes chr2L 775822 intergenic not near genes chr2L 775864 intergenic not near genes chr2L_5_775001 chr2L_775001 RAL-808_75b 18 chr2L 798888 798901 chr2L 799193 799197 9 307 4.5 2.5 3.5 2.0 309 chr2L 798888 intergenic not near genes chr2L 799042 intergenic not near genes chr2L 799197 intergenic not near genes chr2L_9_795001 chr2L_795001 RAL-808_75b 19 chr2L 877859 877872 chr2L 877921 877926 10 68 3.0 4.0 3.5 2.2 67 chr2L 877859 3` UTR,exon CG15824 -,ninaA + chr2L 877892 3` UTR,intron CG15824 -,ninaA + chr2L 877926 3` UTR,intron CG15824 -,ninaA + chr2L_10_875001 chr2L_875001 RAL-808_75b 20 chr2L 906560 906573 chr2L 906625 906654 9 74 0.0 0.5 0.2 7.5 94 chr2L 906560 intergenic not near genes chr2L 906607 intergenic not near genes chr2L 906654 intergenic not near genes chr2L_9_905001 chr2L_905001 RAL-808_75b 21 chr2L 922478 922493 chr2L 922545 922566 4 69 1.0 2.0 1.5 1.6 88 chr2L 922478 intergenic CG4341 + chr2L 922522 intergenic CG4341 + chr2L 922566 intergenic CG4341 + chr2L_4_920001 chr2L_920001 RAL-808_75b 22 chr2L 976885 976912 chr2L 984514 984545 roo 7 7632 2.5 2.5 2.5 2.0 7660 chr2L 976885 intergenic not near genes chr2L 980715 intergenic not near genes chr2L 984545 intergenic not near genes chr2L_7_980001 chr2L_980001 RAL-808_75b 23 chr2L 1035562 1035592 chr2L 1035638 1035661 8 70 2.5 3.0 2.8 2.1 99 chr2L 1035562 intron IA-2 - chr2L 1035612 intron IA-2 - chr2L 1035661 intron IA-2 - chr2L_8_1035001 chr2L_1035001 RAL-808_75b 24 chr2L 1126678 1126702 chr2L 1126751 1126767 4 70 3.0 1.0 2.0 1.3 89 chr2L 1126678 intron Pino - chr2L 1126722 intron Pino - chr2L 1126767 intron Pino - chr2L_4_1125001 chr2L_1125001 RAL-808_75b 25 chr2L 1178689 1178702 chr2L 1178772 1178779 4 82 3.5 4.5 4.0 0.8 90 chr2L 1178689 intron CG4896 + chr2L 1178734 intron CG4896 + chr2L 1178779 intron CG4896 + chr2L_4_1175001 chr2L_1175001 RAL-808_75b 26 chr2L 1220135 1220161 chr2L 1227593 1227616 blood 12 7457 2.5 2.5 2.5 3.4 7481 chr2L 1220135 intron CG42329 + chr2L 1223876 intron CG42329 + chr2L 1227616 intron CG42329 + chr2L_12_1220001 chr2L_1220001 RAL-808_75b 27 chr2L 1261149 1261255 chr2L 1261219 1261336 5 77 0.5 0.0 0.2 4.2 187 chr2L 1261149 intron robo3 + chr2L 1261242 intron robo3 + chr2L 1261336 intron robo3 + chr2L_5_1260001 chr2L_1260001 RAL-808_75b 28 chr2L 1392586 1392602 chr2L 1392684 1392687 4 94 3.0 2.0 2.5 1.1 101 chr2L 1392586 intron lea - chr2L 1392636 intron lea - chr2L 1392687 intron lea - chr2L_4_1390001 chr2L_1390001 RAL-808_75b 29 chr2L 1467513 1467532 chr2L 1467578 1467612 7 73 0.5 3.5 2.0 2.3 99 chr2L 1467513 intergenic not near genes chr2L 1467562 intergenic not near genes chr2L 1467612 intergenic not near genes chr2L_7_1465001 chr2L_1465001 RAL-808_75b 30 chr2L 1541047 1541070 chr2L 1541117 1541147 10 69 2.5 4.0 3.2 2.4 100 chr2L 1541047 intergenic not near genes chr2L 1541097 intergenic not near genes chr2L 1541147 intergenic not near genes chr2L_10_1540001 chr2L_1540001 RAL-808_75b 31 chr2L 1590960 1590989 chr2L 1591036 1591044 9 71 1.5 3.0 2.2 2.8 84 chr2L 1590960 intron haf + chr2L 1591002 intron haf + chr2L 1591044 intron haf + chr2L_9_1590001 chr2L_1590001 RAL-808_75b 32 chr2L 1711361 1711386 chr2L 1711681 1711707 mdg3 4 320 2.0 3.5 2.8 1.1 346 chr2L 1711361 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711534 3` UTR frtz - chr2L 1711707 3` UTR frtz - chr2L_4_1710001 chr2L_1710001 RAL-808_75b 33 chr2L 1925488 1925499 chr2L 1925565 1925576 4 77 3.5 1.5 2.5 1.1 88 chr2L 1925488 intron CG7337 + chr2L 1925532 intron CG7337 + chr2L 1925576 intron CG7337 + chr2L_4_1925001 chr2L_1925001 RAL-808_75b 34 chr2L 1993208 1993230 chr2L 1993282 1993315 13 80 2.0 4.5 3.2 3.1 107 chr2L 1993208 intergenic not near genes chr2L 1993262 intergenic not near genes chr2L 1993315 intergenic not near genes chr2L_13_1990001 chr2L_1990001 RAL-808_75b 35 chr2L 2047828 2047834 chr2L 2047996 2048017 5 180 1.5 0.0 0.8 2.8 189 chr2L 2047828 3` UTR Kebab + chr2L 2047922 3` UTR Kebab + chr2L 2048017 3` UTR Kebab + chr2L_5_2045001 chr2L_2045001 RAL-808_75b 36 chr2L 2068815 2068823 chr2L 2068994 2069006 4 182 7.0 4.0 5.5 0.6 191 chr2L 2068815 intron dpr3 - chr2L 2068910 intron dpr3 - chr2L 2069006 intron dpr3 - chr2L_4_2065001 chr2L_2065001 RAL-808_75b 37 chr2L 2100389 2100408 chr2L 2109537 2109538 roo 6 9142 3.0 5.0 4.0 1.2 9149 chr2L 2100389 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109538 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-808_75b 38 chr2L 2125512 2125532 chr2L 2125857 2125889 6 345 10.0 24.0 17.0 0.3 377 chr2L 2125512 intergenic not near genes chr2L 2125700 intergenic not near genes chr2L 2125889 intergenic not near genes chr2L_6_2125001 chr2L_2125001 RAL-808_75b 39 chr2L 2260806 2260839 chr2L 2260891 2260922 7 83 3.5 1.5 2.5 2.0 116 chr2L 2260806 intergenic not near genes chr2L 2260864 intergenic not near genes chr2L 2260922 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-808_75b 40 chr2L 2311071 2311092 chr2L 2311166 2311186 6 93 1.5 2.0 1.8 2.1 115 chr2L 2311071 intron CG9967 - chr2L 2311128 intron CG9967 - chr2L 2311186 intron CG9967 - chr2L_6_2310001 chr2L_2310001 RAL-808_75b 41 chr2L 2399402 2399415 chr2L 2399497 2399509 4 94 2.5 1.0 1.8 1.4 107 chr2L 2399402 intron VGlut + chr2L 2399456 intron VGlut + chr2L 2399509 intron VGlut + chr2L_4_2395001 chr2L_2395001 RAL-808_75b 42 chr2L 2427380 2427401 chr2L 2427466 2427467 8 83 2.5 4.0 3.2 1.9 87 chr2L 2427380 3` UTR CR44912 - chr2L 2427424 3` UTR CR44912 - chr2L 2427467 3` UTR CR44912 - chr2L_8_2425001 chr2L_2425001 RAL-808_75b 43 chr2L 2661211 2661230 chr2L 2663031 2663053 I-element 5 1823 1.5 2.0 1.8 1.8 1842 chr2L 2661211 intergenic not near genes chr2L 2662132 intergenic not near genes chr2L 2663053 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-808_75b 44 chr2L 2698867 2698895 chr2L 2698954 2698981 7 85 2.0 3.5 2.8 1.8 114 chr2L 2698867 intron CG31690 + chr2L 2698924 intron CG31690 + chr2L 2698981 intron CG31690 + chr2L_7_2695001 chr2L_2695001 RAL-808_75b 45 chr2L 2826538 2826575 chr2L 2826630 2826634 5 75 0.0 7.0 3.5 1.1 96 chr2L 2826538 intron Duox - chr2L 2826586 intron Duox - chr2L 2826634 intron Duox - chr2L_5_2825001 chr2L_2825001 RAL-808_75b 46 chr2L 2885379 2885396 chr2L 2885456 2885473 5 76 1.0 1.0 1.0 2.5 94 chr2L 2885379 intron NTPase - chr2L 2885426 intron NTPase - chr2L 2885473 intron NTPase - chr2L_5_2885001 chr2L_2885001 RAL-808_75b 47 chr2L 2937418 2937447 chr2L 2937495 2937512 7 71 1.0 1.0 1.0 3.5 94 chr2L 2937418 intron lilli + chr2L 2937465 intron lilli + chr2L 2937512 intron lilli + chr2L_7_2935001 chr2L_2935001 RAL-808_75b 48 chr2L 3073031 3073055 chr2L 3078233 3078257 copia 12 5198 3.0 5.0 4.0 2.4 5226 chr2L 3073031 intron toc - chr2L 3075644 intron toc - chr2L 3078257 intron toc - chr2L_12_3075001 chr2L_3075001 RAL-808_75b 49 chr2L 3108882 3108897 chr2L 3108954 3108959 7 72 2.5 5.5 4.0 1.4 77 chr2L 3108882 intron toc - chr2L 3108920 intron toc - chr2L 3108959 intron toc - chr2L_7_3105001 chr2L_3105001 RAL-808_75b 50 chr2L 3147280 3147306 chr2L 3147350 3147365 11 66 2.5 4.5 3.5 2.4 85 chr2L 3147280 3` UTR Mad - chr2L 3147322 3` UTR Mad - chr2L 3147365 3` UTR Mad - chr2L_11_3145001 chr2L_3145001 RAL-808_75b 51 chr2L 3191512 3191542 chr2L 3191593 3191594 4 73 2.0 1.5 1.8 1.4 82 chr2L 3191512 intron CG34393 - chr2L 3191553 intron CG34393 - chr2L 3191594 intron CG34393 - chr2L_4_3190001 chr2L_3190001 RAL-808_75b 52 chr2L 3228210 3228238 chr2L 3228283 3228316 4 66 0.0 4.0 2.0 1.3 106 chr2L 3228210 intergenic not near genes chr2L 3228263 intergenic not near genes chr2L 3228316 intergenic not near genes chr2L_4_3225001 chr2L_3225001 RAL-808_75b 53 chr2L 3291249 3291256 chr2L 3291327 3291336 4 80 3.0 8.5 5.8 0.6 87 chr2L 3291249 3` UTR CG9664 - chr2L 3291292 3` UTR CG9664 - chr2L 3291336 3` UTR CG9664 - chr2L_4_3290001 chr2L_3290001 RAL-808_75b 54 chr2L 3325459 3325483 chr2L 3325543 3325553 9 82 2.0 3.5 2.8 2.4 94 chr2L 3325459 exon CG33281 + chr2L 3325506 intron CG33281 + chr2L 3325553 intron CG33281 + chr2L_9_3325001 chr2L_3325001 RAL-808_75b 55 chr2L 3386246 3386266 chr2L 3386343 3386349 4 99 4.5 3.0 3.8 0.8 103 chr2L 3386246 intergenic not near genes chr2L 3386298 intergenic not near genes chr2L 3386349 intergenic not near genes chr2L_4_3385001 chr2L_3385001 RAL-808_75b 56 chr2L 3388602 3388630 chr2L 3388842 3388871 pogo 6 240 2.5 2.0 2.2 1.9 269 chr2L 3388602 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388871 intergenic CG42460 -,CR44791 + chr2L_6_3385001 chr2L_3385001 RAL-808_75b 57 chr2L 3395025 3395049 chr2L 3395107 3395131 9 79 3.5 2.0 2.8 2.4 106 chr2L 3395025 intergenic not near genes chr2L 3395078 intergenic not near genes chr2L 3395131 intergenic not near genes chr2L_9_3395001 chr2L_3395001 RAL-808_75b 58 chr2L 3438436 3438451 chr2L 3438529 3438544 6 93 7.0 0.5 3.8 1.2 108 chr2L 3438436 intergenic not near genes chr2L 3438490 intergenic not near genes chr2L 3438544 intergenic not near genes chr2L_6_3435001 chr2L_3435001 RAL-808_75b 59 chr2L 3582880 3582909 chr2L 3582957 3582970 6 71 1.0 3.5 2.2 1.9 90 chr2L 3582880 intergenic not near genes chr2L 3582925 intergenic not near genes chr2L 3582970 intergenic not near genes chr2L_6_3580001 chr2L_3580001 RAL-808_75b 60 chr2L 3634111 3634139 chr2L 3634180 3634207 7 78 3.0 4.0 3.5 1.6 96 chr2L 3634111 intron for - chr2L 3634159 intron for - chr2L 3634207 intron for - chr2L_7_3630001 chr2L_3630001 RAL-808_75b 61 chr2L 3649792 3649797 chr2L 3654994 3655000 copia 4 5203 2.5 3.0 2.8 1.1 5208 chr2L 3649792 intron for - chr2L 3652396 intron for - chr2L 3655000 intron for - chr2L_4_3650001 chr2L_3650001 RAL-808_75b 62 chr2L 3649800 3649821 chr2L 3654990 3654993 copia 5 5189 1.5 2.5 2.0 1.7 5193 chr2L 3649800 intron for - chr2L 3652396 intron for - chr2L 3654993 intron for - chr2L_5_3650001 chr2L_3650001 RAL-808_75b 63 chr2L 3787660 3787676 chr2L 3787774 3787776 4 110 3.0 2.5 2.8 1.1 116 chr2L 3787660 intron CG3921 + chr2L 3787718 intron CG3921 + chr2L 3787776 intron CG3921 + chr2L_4_3785001 chr2L_3785001 RAL-808_75b 64 chr2L 4066051 4066062 chr2L 4068876 4068887 Juan 5 2825 2.5 8.0 5.2 0.8 2836 chr2L 4066051 intron ed + chr2L 4067469 intron ed + chr2L 4068887 intron ed + chr2L_5_4065001 chr2L_4065001 RAL-808_75b 65 chr2L 4159412 4159440 chr2L 4159609 4159611 4 192 0.0 2.5 1.2 1.8 199 chr2L 4159412 intergenic not near genes chr2L 4159512 intergenic not near genes chr2L 4159611 intergenic not near genes chr2L_4_4155001 chr2L_4155001 RAL-808_75b 66 chr2L 4181299 4181305 chr2L 4183902 4183921 Burdock 5 2620 2.5 2.5 2.5 1.4 2622 chr2L 4181299 intergenic not near genes chr2L 4182610 intergenic not near genes chr2L 4183921 intergenic not near genes chr2L_5_4180001 chr2L_4180001 RAL-808_75b 67 chr2L 4265660 4265686 chr2L 4265750 4265776 5 89 3.5 4.5 4.0 1.0 116 chr2L 4265660 intergenic not near genes chr2L 4265718 intergenic not near genes chr2L 4265776 intergenic not near genes chr2L_5_4265001 chr2L_4265001 RAL-808_75b 68 chr2L 4601704 4601737 chr2L 4609145 4609169 mdg1 9 7439 5.0 7.0 6.0 1.3 7465 chr2L 4601704 intron dp - chr2L 4605436 intron dp - chr2L 4609169 intron dp - chr2L_9_4605001 chr2L_4605001 RAL-808_75b 69 chr2L 4855807 4855831 chr2L 4856006 4856017 8 204 0.5 2.0 1.2 3.6 210 chr2L 4855807 intron pog + chr2L 4855912 intron pog + chr2L 4856017 intron pog + chr2L_8_4855001 chr2L_4855001 RAL-808_75b 70 chr2L 4858466 4858485 chr2L 4858554 4858573 4 85 0.0 1.5 0.8 2.2 107 chr2L 4858466 intron pog + chr2L 4858520 intron pog + chr2L 4858573 intron pog + chr2L_4_4855001 chr2L_4855001 RAL-808_75b 71 chr2L 4953521 4953543 chr2L 4953752 4953755 pogo 6 226 4.5 2.5 3.5 1.3 234 chr2L 4953521 intergenic Jon25Bii - chr2L 4953638 intergenic not near genes chr2L 4953755 intergenic not near genes chr2L_6_4950001 chr2L_4950001 RAL-808_75b 72 chr2L 5120986 5121003 chr2L 5121080 5121088 6 90 3.0 10.0 6.5 0.8 102 chr2L 5120986 intron Msp300 + chr2L 5121037 intron Msp300 + chr2L 5121088 intron Msp300 + chr2L_6_5120001 chr2L_5120001 RAL-808_75b 73 chr2L 5342775 5342804 chr2L 5345154 5345184 Doc 6 2380 2.5 2.5 2.5 1.7 2409 chr2L 5342775 intergenic not near genes chr2L 5343980 intergenic not near genes chr2L 5345184 intergenic not near genes chr2L_6_5340001 chr2L_5340001 RAL-808_75b 74 chr2L 5508550 5508561 chr2L 5508607 5508637 5 70 3.5 2.0 2.8 1.3 87 chr2L 5508550 intergenic not near genes chr2L 5508594 intergenic not near genes chr2L 5508637 intergenic not near genes chr2L_5_5505001 chr2L_5505001 RAL-808_75b 75 chr2L 5676891 5676916 chr2L 5676987 5677012 6 96 2.5 0.5 1.5 2.4 121 chr2L 5676891 intergenic not near genes chr2L 5676952 intergenic not near genes chr2L 5677012 intergenic not near genes chr2L_6_5675001 chr2L_5675001 RAL-808_75b 76 chr2L 5720257 5720290 chr2L 5720344 5720377 12 84 3.5 3.0 3.2 2.9 120 chr2L 5720257 intron CG11149 - chr2L 5720317 intron CG11149 - chr2L 5720377 intron CG11149 - chr2L_12_5720001 chr2L_5720001 RAL-808_75b 77 chr2L 5772273 5772288 chr2L 5772466 5772481 4 191 5.0 1.5 3.2 1.0 208 chr2L 5772273 intron CG9171 - chr2L 5772377 intron CG9171 - chr2L 5772481 intron CG9171 - chr2L_4_5770001 chr2L_5770001 RAL-808_75b 78 chr2L 5887611 5887634 chr2L 5887690 5887715 5 79 1.5 1.0 1.2 2.3 104 chr2L 5887611 3` UTR CR44577 - chr2L 5887663 3` UTR CR44577 - chr2L 5887715 3` UTR CR44577 - chr2L_5_5885001 chr2L_5885001 RAL-808_75b 79 chr2L 5897597 5897617 chr2L 5897680 5897700 9 81 8.5 4.5 6.5 1.2 103 chr2L 5897597 intergenic not near genes chr2L 5897648 intergenic not near genes chr2L 5897700 intergenic not near genes chr2L_9_5895001 chr2L_5895001 RAL-808_75b 80 chr2L 5897620 5897628 chr2L 5897678 5897710 5 69 5.5 4.0 4.8 0.9 90 chr2L 5897620 intergenic not near genes chr2L 5897665 intergenic not near genes chr2L 5897710 intergenic not near genes chr2L_5_5895001 chr2L_5895001 RAL-808_75b 81 chr2L 5904460 5904472 chr2L 5904540 5904552 6 80 1.5 1.0 1.2 2.7 92 chr2L 5904460 intron CG9021 - chr2L 5904506 intron CG9021 - chr2L 5904552 intron CG9021 - chr2L_6_5900001 chr2L_5900001 RAL-808_75b 82 chr2L 6001760 6001777 chr2L 6001835 6001854 5 69 3.0 3.0 3.0 1.2 94 chr2L 6001760 3` UTR Tsp26A + chr2L 6001807 3` UTR Tsp26A + chr2L 6001854 3` UTR Tsp26A + chr2L_5_6000001 chr2L_6000001 RAL-808_75b 83 chr2L 6251148 6251169 chr2L 6251517 6251538 7 367 4.5 2.0 3.2 1.7 390 chr2L 6251148 intergenic not near genes chr2L 6251343 intergenic not near genes chr2L 6251538 intergenic not near genes chr2L_7_6250001 chr2L_6250001 RAL-808_75b 84 chr2L 6299816 6299833 chr2L 6299981 6299994 7 167 5.5 3.5 4.5 1.3 178 chr2L 6299816 intron Ddr + chr2L 6299905 intron Ddr + chr2L 6299994 intron Ddr + chr2L_7_6295001 chr2L_6295001 RAL-808_75b 85 chr2L 6308325 6308341 chr2L 6308394 6308424 5 80 1.5 1.5 1.5 2.0 99 chr2L 6308325 intron Ddr + chr2L 6308374 intron Ddr + chr2L 6308424 intron,3` UTR Ddr +,CG43922 - chr2L_5_6305001 chr2L_6305001 RAL-808_75b 86 chr2L 6363170 6363179 chr2L 6366092 6366097 Burdock 4 2921 1.5 4.5 3.0 1.0 2927 chr2L 6363170 intergenic not near genes chr2L 6364634 intergenic not near genes chr2L 6366097 intergenic not near genes chr2L_4_6360001 chr2L_6360001 RAL-808_75b 87 chr2L 6426867 6426882 chr2L 6445119 6445136 roo 7 18258 6.0 4.5 5.2 1.1 18269 chr2L 6426867 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445136 exon CG9527 - chr2L_7_6435001 chr2L_6435001 RAL-808_75b 88 chr2L 6543063 6543085 chr2L 6543143 6543165 9 77 3.0 5.5 4.2 1.7 102 chr2L 6543063 intron eya - chr2L 6543114 intron eya - chr2L 6543165 intron eya - chr2L_9_6540001 chr2L_6540001 RAL-808_75b 89 chr2L 6590095 6590125 chr2L 6590168 6590185 12 67 1.5 3.5 2.5 3.4 90 chr2L 6590095 intron CG11319 - chr2L 6590140 intron CG11319 - chr2L 6590185 intron CG11319 - chr2L_12_6590001 chr2L_6590001 RAL-808_75b 90 chr2L 6640910 6640936 chr2L 6641005 6641012 8 87 3.5 2.0 2.8 2.1 102 chr2L 6640910 exon CG31635 - chr2L 6640961 intron CG31635 - chr2L 6641012 intron CG31635 - chr2L_8_6640001 chr2L_6640001 RAL-808_75b 91 chr2L 6891444 6891467 chr2L 6891542 6891561 6 96 5.5 3.5 4.5 1.1 117 chr2L 6891444 intron Nlg2 + chr2L 6891502 intron Nlg2 + chr2L 6891561 intron Nlg2 + chr2L_6_6890001 chr2L_6890001 RAL-808_75b 92 chr2L 7000377 7000394 chr2L 7000455 7000459 4 75 1.0 3.5 2.2 1.2 82 chr2L 7000377 intron uif - chr2L 7000418 intron uif - chr2L 7000459 intron uif - chr2L_4_7000001 chr2L_7000001 RAL-808_75b 93 chr2L 7246555 7246580 chr2L 7247413 7247435 4 858 0.0 3.0 1.5 1.6 880 chr2L 7246555 intron Ndae1 - chr2L 7246995 intron Ndae1 - chr2L 7247435 intron Ndae1 - chr2L_4_7245001 chr2L_7245001 RAL-808_75b 94 chr2L 7343333 7343354 chr2L 7350439 7350468 roo 8 7108 6.0 4.5 5.2 1.3 7135 chr2L 7343333 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350468 intron Wnt6 + chr2L_8_7345001 chr2L_7345001 RAL-808_75b 95 chr2L 7399316 7399334 chr2L 7399680 7399692 5 367 1.0 5.0 3.0 1.2 376 chr2L 7399316 intergenic not near genes chr2L 7399504 intergenic not near genes chr2L 7399692 intergenic not near genes chr2L_5_7395001 chr2L_7395001 RAL-808_75b 96 chr2L 7938085 7938115 chr2L 7938165 7938194 6 76 3.0 3.5 3.2 1.4 109 chr2L 7938085 intron Snoo - chr2L 7938140 intron Snoo - chr2L 7938194 intron Snoo - chr2L_6_7935001 chr2L_7935001 RAL-808_75b 97 chr2L 8171282 8171292 chr2L 8171363 8171373 4 79 0.0 3.5 1.8 1.4 91 chr2L 8171282 intron Piezo + chr2L 8171328 intron Piezo + chr2L 8171373 intron Piezo + chr2L_4_8170001 chr2L_8170001 RAL-808_75b 98 chr2L 8244732 8244747 chr2L 8244854 8244858 5 120 2.5 3.0 2.8 1.3 126 chr2L 8244732 intron CG8086 - chr2L 8244795 intron CG8086 - chr2L 8244858 intron CG8086 - chr2L_5_8240001 chr2L_8240001 RAL-808_75b 99 chr2L 8452421 8452449 chr2L 8461590 8461613 roo 6 9164 2.0 5.5 3.8 1.2 9192 chr2L 8452421 intron fu12 - chr2L 8457017 intron fu12 - chr2L 8461613 intron fu12 - chr2L_6_8455001 chr2L_8455001 RAL-808_75b 100 chr2L 8719206 8719236 chr2L 8719282 8719312 8 74 2.5 5.5 4.0 1.6 106 chr2L 8719206 intron raw - chr2L 8719259 intron raw - chr2L 8719312 intron raw - chr2L_8_8715001 chr2L_8715001 RAL-808_75b 101 chr2L 8723115 8723146 chr2L 8731490 8731508 Tirant 12 8367 2.5 2.5 2.5 3.4 8393 chr2L 8723115 intron raw - chr2L 8727312 intron raw - chr2L 8731508 intron raw - chr2L_12_8725001 chr2L_8725001 RAL-808_75b 102 chr2L 8976224 8976253 chr2L 8976316 8976345 4 92 2.0 0.5 1.2 1.8 121 chr2L 8976224 intergenic not near genes chr2L 8976284 intergenic not near genes chr2L 8976345 intergenic not near genes chr2L_4_8975001 chr2L_8975001 RAL-808_75b 103 chr2L 9000278 9000308 chr2L 9007788 9007818 roo 10 7509 4.0 1.0 2.5 2.9 7540 chr2L 9000278 intergenic Try29F + chr2L 9004048 intergenic not near genes chr2L 9007818 intergenic not near genes chr2L_10_9000001 chr2L_9000001 RAL-808_75b 104 chr2L 9040032 9040052 chr2L 9040116 9040120 5 79 4.5 2.0 3.2 1.2 88 chr2L 9040032 intergenic not near genes chr2L 9040076 intergenic not near genes chr2L 9040120 intergenic not near genes chr2L_5_9040001 chr2L_9040001 RAL-808_75b 105 chr2L 9084337 9084339 chr2L 16217660 16217660 4 7133322 15.0 21.0 18.0 0.2 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-808_75b 106 chr2L 9202058 9202085 chr2L 9202133 9202140 5 71 2.0 4.0 3.0 1.2 82 chr2L 9202058 intron tai + chr2L 9202099 intron tai + chr2L 9202140 intron tai + chr2L_5_9200001 chr2L_9200001 RAL-808_75b 107 chr2L 9251153 9251178 chr2L 9251250 9251273 4 96 3.0 5.5 4.2 0.8 120 chr2L 9251153 intergenic aust -,borr - chr2L 9251213 intergenic aust -,borr - chr2L 9251273 intergenic borr -,aust - chr2L_4_9250001 chr2L_9250001 RAL-808_75b 108 chr2L 9287341 9287352 chr2L 9287438 9287449 5 96 2.5 6.5 4.5 0.9 108 chr2L 9287341 intron Ggamma30A + chr2L 9287395 intron Ggamma30A + chr2L 9287449 intron Ggamma30A + chr2L_5_9285001 chr2L_9285001 RAL-808_75b 109 chr2L 9303408 9303493 chr2L 9303493 9303552 10 74 0.0 0.5 0.2 8.3 144 chr2L 9303408 intergenic not near genes chr2L 9303480 intergenic not near genes chr2L 9303552 intergenic not near genes chr2L_10_9300001 chr2L_9300001 RAL-808_75b 110 chr2L 9317552 9317562 chr2L 9317808 9317839 5 271 0.0 2.5 1.2 2.3 287 chr2L 9317552 intergenic not near genes chr2L 9317696 intergenic not near genes chr2L 9317839 intergenic not near genes chr2L_5_9315001 chr2L_9315001 RAL-808_75b 111 chr2L 9393510 9393527 chr2L 9396463 9396494 jockey 8 2962 2.5 6.5 4.5 1.5 2984 chr2L 9393510 intron Shawl - chr2L 9395002 intron Shawl - chr2L 9396494 intron Shawl - chr2L_8_9390001 chr2L_9390001 RAL-808_75b 112 chr2L 9490531 9490537 chr2L 9490607 9490616 6 79 3.0 8.5 5.8 0.9 85 chr2L 9490531 intergenic not near genes chr2L 9490574 intergenic not near genes chr2L 9490616 intergenic not near genes chr2L_6_9490001 chr2L_9490001 RAL-808_75b 113 chr2L 9490545 9490552 chr2L 9490600 9490632 7 73 3.0 6.5 4.8 1.2 87 chr2L 9490545 intergenic not near genes chr2L 9490588 intergenic not near genes chr2L 9490632 intergenic not near genes chr2L_7_9490001 chr2L_9490001 RAL-808_75b 114 chr2L 9619506 9619519 chr2L 9619842 9619842 4 332 2.0 2.0 2.0 1.3 336 chr2L 9619506 intron GlcAT-S + chr2L 9619674 intron GlcAT-S + chr2L 9619842 intron GlcAT-S + chr2L_4_9615001 chr2L_9615001 RAL-808_75b 115 chr2L 10001463 10001501 chr2L 10001543 10001581 9 79 0.0 3.0 1.5 3.6 118 chr2L 10001463 intron,intron CG31875 -,SoYb - chr2L 10001522 intron,intron CG31875 -,SoYb - chr2L 10001581 intron,intron CG31875 -,SoYb - chr2L_9_10000001 chr2L_10000001 RAL-808_75b 116 chr2L 10156337 10156354 chr2L 10163791 10163824 blood 4 7463 6.0 3.5 4.8 0.7 7487 chr2L 10156337 intron,3` UTR CG44153 -,CG4839 + chr2L 10160080 intron CG44153 - chr2L 10163824 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-808_75b 117 chr2L 10407743 10407775 chr2L 10407824 10407856 6 80 0.5 1.5 1.0 3.0 113 chr2L 10407743 intron Ir31a + chr2L 10407800 intron Ir31a + chr2L 10407856 exon Ir31a + chr2L_6_10405001 chr2L_10405001 RAL-808_75b 118 chr2L 10474392 10474412 chr2L 10474467 10474487 7 78 2.5 2.5 2.5 2.0 95 chr2L 10474392 intergenic RluA-1 - chr2L 10474440 intergenic RluA-1 - chr2L 10474487 intergenic RluA-1 - chr2L_7_10470001 chr2L_10470001 RAL-808_75b 119 chr2L 10579048 10579082 chr2L 10579138 10579158 11 82 1.0 3.5 2.2 3.4 110 chr2L 10579048 intron Trim9 + chr2L 10579103 intron Trim9 + chr2L 10579158 intron Trim9 + chr2L_11_10575001 chr2L_10575001 RAL-808_75b 120 chr2L 10634753 10634786 chr2L 10634831 10634861 7 75 2.0 0.0 1.0 3.5 108 chr2L 10634753 intron CG7329 - chr2L 10634807 intron CG7329 - chr2L 10634861 intron CG7329 - chr2L_7_10630001 chr2L_10630001 RAL-808_75b 121 chr2L 10679060 10679097 chr2L 10679149 10679151 5 75 3.5 5.5 4.5 0.9 91 chr2L 10679060 exon CG17104 + chr2L 10679106 exon CG17104 + chr2L 10679151 exon CG17104 + chr2L_5_10675001 chr2L_10675001 RAL-808_75b 122 chr2L 10813671 10813701 chr2L 10813823 10813853 6 150 2.5 4.0 3.2 1.4 182 chr2L 10813671 intron Nos - chr2L 10813762 intron Nos - chr2L 10813853 intron Nos - chr2L_6_10810001 chr2L_10810001 RAL-808_75b 123 chr2L 10836342 10836367 chr2L 10836411 10836415 4 64 2.0 2.5 2.2 1.2 73 chr2L 10836342 intron Nos - chr2L 10836378 intron Nos - chr2L 10836415 intron Nos - chr2L_4_10835001 chr2L_10835001 RAL-808_75b 124 chr2L 10862859 10862881 chr2L 10864451 10864459 Rt1c 4 1584 5.0 2.5 3.8 0.8 1600 chr2L 10862859 3` UTR CR43807 - chr2L 10863659 intron CR43807 - chr2L 10864459 intron CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-808_75b 125 chr2L 10946959 10946976 chr2L 10956160 10956191 roo 12 9212 4.0 7.0 5.5 1.8 9232 chr2L 10946959 intron dpr2 - chr2L 10951575 intron dpr2 - chr2L 10956191 intron dpr2 - chr2L_12_10950001 chr2L_10950001 RAL-808_75b 126 chr2L 11418661 11418683 chr2L 11418740 11418762 6 78 4.0 3.5 3.8 1.2 101 chr2L 11418661 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418762 intergenic not near genes chr2L_6_11415001 chr2L_11415001 RAL-808_75b 127 chr2L 11450121 11450155 chr2L 11450207 11450237 6 74 0.0 1.5 0.8 3.3 116 chr2L 11450121 intergenic not near genes chr2L 11450179 intergenic not near genes chr2L 11450237 intergenic not near genes chr2L_6_11450001 chr2L_11450001 RAL-808_75b 128 chr2L 11563646 11563662 chr2L 11568850 11568854 copia 4 5200 4.5 3.5 4.0 0.8 5208 chr2L 11563646 intergenic not near genes chr2L 11566250 intergenic not near genes chr2L 11568854 intergenic not near genes chr2L_4_11565001 chr2L_11565001 RAL-808_75b 129 chr2L 11713516 11713530 chr2L 11720984 11720998 blood 5 7465 3.5 6.5 5.0 0.8 7482 chr2L 11713516 intergenic not near genes chr2L 11717257 intergenic not near genes chr2L 11720998 intergenic CR44143 + chr2L_5_11715001 chr2L_11715001 RAL-808_75b 130 chr2L 11953738 11953770 chr2L 11953817 11953826 8 74 0.0 4.5 2.2 2.5 88 chr2L 11953738 3` UTR CR43314 - chr2L 11953782 3` UTR CR43314 - chr2L 11953826 3` UTR CR43314 - chr2L_8_11950001 chr2L_11950001 RAL-808_75b 131 chr2L 12142639 12142674 chr2L 12142764 12142789 8 118 5.5 2.5 4.0 1.6 150 chr2L 12142639 intergenic CG31760 + chr2L 12142714 intergenic CG31760 + chr2L 12142789 5` UTR CG31760 + chr2L_8_12140001 chr2L_12140001 RAL-808_75b 132 chr2L 12366864 12366884 chr2L 12366950 12366970 4 82 1.0 1.0 1.0 2.0 106 chr2L 12366864 intron bru-2 + chr2L 12366917 intron bru-2 + chr2L 12366970 intron bru-2 + chr2L_4_12365001 chr2L_12365001 RAL-808_75b 133 chr2L 12445287 12445303 chr2L 12445357 12445358 5 71 0.5 1.5 1.0 2.5 71 chr2L 12445287 intron Oatp33Ea - chr2L 12445322 intron Oatp33Ea - chr2L 12445358 intron Oatp33Ea - chr2L_5_12445001 chr2L_12445001 RAL-808_75b 134 chr2L 12529265 12529448 chr2L 12529381 12529524 8 75 0.5 1.5 1.0 4.0 259 chr2L 12529265 intron bun - chr2L 12529394 intron bun - chr2L 12529524 intron bun - chr2L_8_12525001 chr2L_12525001 RAL-808_75b 135 chr2L 12558333 12558353 chr2L 12565462 12565482 HMS-Beagle 8 7126 2.0 2.0 2.0 2.7 7149 chr2L 12558333 intergenic not near genes chr2L 12561908 intergenic not near genes chr2L 12565482 intergenic not near genes chr2L_8_12560001 chr2L_12560001 RAL-808_75b 136 chr2L 12598986 12598995 chr2L 12599047 12599077 5 76 0.0 1.5 0.8 2.8 91 chr2L 12598986 intron nub + chr2L 12599032 intron nub + chr2L 12599077 intron nub + chr2L_5_12595001 chr2L_12595001 RAL-808_75b 137 chr2L 12731055 12731093 chr2L 12735822 12735859 F-element 7 4762 1.0 4.0 2.5 2.0 4804 chr2L 12731055 intron MRP + chr2L 12733457 intron MRP + chr2L 12735859 intron MRP + chr2L_7_12730001 chr2L_12730001 RAL-808_75b 138 chr2L 12739174 12739205 chr2L 12743955 12743984 Doc 9 4781 2.0 4.5 3.2 2.1 4810 chr2L 12739174 exon MRP + chr2L 12741579 intron MRP + chr2L 12743984 exon MRP + chr2L_9_12740001 chr2L_12740001 RAL-808_75b 139 chr2L 12791605 12791638 chr2L 12795280 12795302 F-element 4 3669 2.0 1.0 1.5 1.6 3697 chr2L 12791605 intergenic not near genes chr2L 12793454 intergenic not near genes chr2L 12795302 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-808_75b 140 chr2L 12861699 12861731 chr2L 12863164 12863198 hobo 9 1463 0.5 6.0 3.2 2.1 1499 chr2L 12861699 intergenic not near genes chr2L 12862448 intergenic not near genes chr2L 12863198 intergenic not near genes chr2L_9_12860001 chr2L_12860001 RAL-808_75b 141 chr2L 12956026 12956054 chr2L 12956104 12956126 9 75 6.0 3.5 4.8 1.6 100 chr2L 12956026 intergenic not near genes chr2L 12956076 intergenic not near genes chr2L 12956126 intergenic not near genes chr2L_9_12955001 chr2L_12955001 RAL-808_75b 142 chr2L 13152230 13152248 chr2L 13152308 13152320 7 75 6.5 4.0 5.2 1.1 90 chr2L 13152230 intergenic not near genes chr2L 13152275 intergenic not near genes chr2L 13152320 intergenic not near genes chr2L_7_13150001 chr2L_13150001 RAL-808_75b 143 chr2L 13152249 13152255 chr2L 13152305 13152333 6 66 6.0 3.0 4.5 1.1 84 chr2L 13152249 intergenic not near genes chr2L 13152291 intergenic not near genes chr2L 13152333 intergenic not near genes chr2L_6_13150001 chr2L_13150001 RAL-808_75b 144 chr2L 13231895 13231913 chr2L 13232005 13232021 5 110 3.5 5.0 4.2 1.0 126 chr2L 13231895 intergenic Prosalpha6T + chr2L 13231958 intergenic Prosalpha6T + chr2L 13232021 intergenic Prosalpha6T + chr2L_5_13230001 chr2L_13230001 RAL-808_75b 145 chr2L 13266386 13266410 chr2L 13266466 13266478 9 77 1.5 3.0 2.2 2.8 92 chr2L 13266386 intron CG44085 + chr2L 13266432 intron CG44085 + chr2L 13266478 intron CG44085 + chr2L_9_13265001 chr2L_13265001 RAL-808_75b 146 chr2L 13351820 13351849 chr2L 13351906 13351935 10 84 3.0 2.0 2.5 2.9 115 chr2L 13351820 exon CG9395 - chr2L 13351878 intron CG9395 - chr2L 13351935 exon CG9395 - chr2L_10_13350001 chr2L_13350001 RAL-808_75b 147 chr2L 13374339 13374351 chr2L 13374423 13374437 4 85 2.0 5.0 3.5 0.9 98 chr2L 13374339 5` UTR CG6565 + chr2L 13374388 5` UTR CG6565 + chr2L 13374437 5` UTR CG6565 + chr2L_4_13370001 chr2L_13370001 RAL-808_75b 148 chr2L 13394129 13394141 chr2L 13394191 13394196 4 63 2.0 2.0 2.0 1.3 67 chr2L 13394129 3` UTR RpL24 - chr2L 13394162 3` UTR RpL24 - chr2L 13394196 3` UTR RpL24 - chr2L_4_13390001 chr2L_13390001 RAL-808_75b 149 chr2L 13405649 13405679 chr2L 13410443 13410474 Doc 10 4790 4.0 4.0 4.0 2.0 4825 chr2L 13405649 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410474 intron CG7110 + chr2L_10_13405001 chr2L_13405001 RAL-808_75b 150 chr2L 13440233 13440252 chr2L 13440326 13440335 7 92 2.0 4.5 3.2 1.7 102 chr2L 13440233 intron,3` UTR CG42784 +,CR45683 - chr2L 13440284 intron,3` UTR CG42784 +,CR45683 - chr2L 13440335 intron,3` UTR CG42784 +,CR45683 - chr2L_7_13440001 chr2L_13440001 RAL-808_75b 151 chr2L 13449460 13449486 chr2L 13456896 13456922 Quasimodo 4 7436 4.5 5.0 4.8 0.7 7462 chr2L 13449460 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453191 intron CG42784 + chr2L 13456922 intron CG42784 + chr2L_4_13450001 chr2L_13450001 RAL-808_75b 152 chr2L 13530761 13530771 chr2L 13531138 13531142 6 381 0.5 4.0 2.2 1.9 381 chr2L 13530761 intron B4 - chr2L 13530952 intron B4 - chr2L 13531142 intron,exon B4 -,CG33643 + chr2L_6_13530001 chr2L_13530001 RAL-808_75b 153 chr2L 13622159 13622171 chr2L 13622237 13622270 7 86 0.5 2.5 1.5 2.8 111 chr2L 13622159 intron kuz + chr2L 13622214 intron kuz + chr2L 13622270 intron kuz + chr2L_7_13620001 chr2L_13620001 RAL-808_75b 154 chr2L 13628945 13628976 chr2L 13629041 13629056 8 87 2.0 4.5 3.2 1.9 111 chr2L 13628945 intron kuz + chr2L 13629000 intron kuz + chr2L 13629056 intron kuz + chr2L_8_13625001 chr2L_13625001 RAL-808_75b 155 chr2L 13693018 13693041 chr2L 13693089 13693116 7 66 3.0 5.0 4.0 1.4 98 chr2L 13693018 intron CG31814 - chr2L 13693067 intron CG31814 - chr2L 13693116 intron CG31814 - chr2L_7_13690001 chr2L_13690001 RAL-808_75b 156 chr2L 14236244 14236261 chr2L 14236341 14236349 4 94 1.5 0.5 1.0 2.0 105 chr2L 14236244 5` UTR CR44728 + chr2L 14236296 5` UTR CR44728 + chr2L 14236349 intergenic CR44728 + chr2L_4_14235001 chr2L_14235001 RAL-808_75b 157 chr2L 14436615 14436635 chr2L 14436732 14436752 5 115 5.5 4.0 4.8 0.9 137 chr2L 14436615 intergenic not near genes chr2L 14436684 intergenic not near genes chr2L 14436752 intergenic not near genes chr2L_5_14435001 chr2L_14435001 RAL-808_75b 158 chr2L 14524623 14524651 chr2L 14525116 14525149 5 485 0.5 2.0 1.2 2.3 526 chr2L 14524623 intron CG33648 + chr2L 14524886 intron CG33648 + chr2L 14525149 exon CG33648 + chr2L_5_14520001 chr2L_14520001 RAL-808_75b 159 chr2L 14588395 14588415 chr2L 14588536 14588568 5 150 2.5 3.0 2.8 1.3 173 chr2L 14588395 intergenic CG42680 - chr2L 14588482 intergenic CG42680 - chr2L 14588568 intergenic CG42680 - chr2L_5_14585001 chr2L_14585001 RAL-808_75b 160 chr2L 14642575 14642600 chr2L 14651736 14651763 roo 7 9159 2.0 2.5 2.2 2.2 9188 chr2L 14642575 intron osp - chr2L 14647169 intron osp - chr2L 14651763 intron osp - chr2L_7_14645001 chr2L_14645001 RAL-808_75b 161 chr2L 14707213 14707235 chr2L 14707330 14707353 5 118 3.5 5.0 4.2 1.0 140 chr2L 14707213 intergenic not near genes chr2L 14707283 intergenic not near genes chr2L 14707353 intergenic not near genes chr2L_5_14705001 chr2L_14705001 RAL-808_75b 162 chr2L 14771849 14771860 chr2L 14771932 14771935 5 81 0.0 5.5 2.8 1.3 86 chr2L 14771849 intergenic not near genes chr2L 14771892 intergenic not near genes chr2L 14771935 intergenic not near genes chr2L_5_14770001 chr2L_14770001 RAL-808_75b 163 chr2L 14840980 14841004 chr2L 14841067 14841090 12 86 1.5 2.5 2.0 4.0 110 chr2L 14840980 3` UTR CR43805 - chr2L 14841035 3` UTR CR43805 - chr2L 14841090 3` UTR CR43805 - chr2L_12_14840001 chr2L_14840001 RAL-808_75b 164 chr2L 14984388 14984398 chr2L 14991989 14992000 opus 4 7600 8.0 3.5 5.8 0.6 7612 chr2L 14984388 intron mol - chr2L 14988194 intron mol - chr2L 14992000 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-808_75b 165 chr2L 15044711 15044727 chr2L 15044787 15044803 5 75 1.0 0.0 0.5 3.3 92 chr2L 15044711 intergenic ck - chr2L 15044757 intergenic ck - chr2L 15044803 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-808_75b 166 chr2L 15077909 15078097 chr2L 15077991 15078184 6 82 0.5 3.5 2.0 2.0 275 chr2L 15077909 intron CG15270 + chr2L 15078046 intron CG15270 + chr2L 15078184 intron CG15270 + chr2L_6_15075001 chr2L_15075001 RAL-808_75b 167 chr2L 15083952 15083974 chr2L 15084902 15084931 7 954 0.0 4.5 2.2 2.2 979 chr2L 15083952 intron CG15270 + chr2L 15084442 intron CG15270 + chr2L 15084931 intron CG15270 + chr2L_7_15080001 chr2L_15080001 RAL-808_75b 168 chr2L 15252984 15253007 chr2L 15253063 15253079 6 78 0.5 1.5 1.0 3.0 95 chr2L 15252984 intron dao + chr2L 15253032 intron dao + chr2L 15253079 intron dao + chr2L_6_15250001 chr2L_15250001 RAL-808_75b 169 chr2L 15343536 15343565 chr2L 15343621 15343630 4 80 5.0 1.0 3.0 1.0 94 chr2L 15343536 intergenic not near genes chr2L 15343583 intergenic not near genes chr2L 15343630 intergenic not near genes chr2L_4_15340001 chr2L_15340001 RAL-808_75b 170 chr2L 15446051 15446068 chr2L 15453520 15453537 blood 5 7467 2.5 3.5 3.0 1.2 7486 chr2L 15446051 intergenic not near genes chr2L 15449794 intergenic not near genes chr2L 15453537 intergenic not near genes chr2L_5_15445001 chr2L_15445001 RAL-808_75b 171 chr2L 15956023 15956048 chr2L 15957490 15957503 hobo 7 1465 8.5 5.0 6.8 0.9 1480 chr2L 15956023 intron beat-Ib - chr2L 15956763 intron beat-Ib - chr2L 15957503 intron beat-Ib - chr2L_7_15955001 chr2L_15955001 RAL-808_75b 172 chr2L 15960028 15960054 chr2L 15960119 15960129 4 84 4.5 1.5 3.0 1.0 101 chr2L 15960028 intron beat-Ib - chr2L 15960078 intron beat-Ib - chr2L 15960129 intron beat-Ib - chr2L_4_15960001 chr2L_15960001 RAL-808_75b 173 chr2L 16064313 16064343 chr2L 16064390 16064412 8 71 1.5 1.0 1.2 3.6 99 chr2L 16064313 intron beat-Ia + chr2L 16064362 intron beat-Ia + chr2L 16064412 intron beat-Ia + chr2L_8_16060001 chr2L_16060001 RAL-808_75b 174 chr2L 16091627 16091651 chr2L 16091710 16091736 5 81 4.5 1.0 2.8 1.3 109 chr2L 16091627 intergenic not near genes chr2L 16091682 intergenic not near genes chr2L 16091736 intergenic not near genes chr2L_5_16090001 chr2L_16090001 RAL-808_75b 175 chr2L 16141165 16141188 chr2L 16146371 16146371 copia 5 5200 5.5 3.5 4.5 0.9 5206 chr2L 16141165 intergenic not near genes chr2L 16143768 intergenic not near genes chr2L 16146371 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-808_75b 176 chr2L 16280261 16280282 chr2L 16281430 16281450 1360 4 1168 4.5 4.0 4.2 0.8 1189 chr2L 16280261 intron crp - chr2L 16280856 intron crp - chr2L 16281450 intron crp - chr2L_4_16280001 chr2L_16280001 RAL-808_75b 177 chr2L 16468300 16468307 chr2L 16468395 16468405 4 96 0.0 2.0 1.0 2.0 105 chr2L 16468300 intron dac - chr2L 16468352 intron dac - chr2L 16468405 intron dac - chr2L_4_16465001 chr2L_16465001 RAL-808_75b 178 chr2L 16572230 16572239 chr2L 16572300 16572323 5 85 2.0 0.0 1.0 2.5 93 chr2L 16572230 intron CG42389 + chr2L 16572276 intron CG42389 + chr2L 16572323 intron CG42389 + chr2L_5_16570001 chr2L_16570001 RAL-808_75b 179 chr2L 16694146 16694163 chr2L 16694213 16694232 7 73 2.0 4.0 3.0 1.8 86 chr2L 16694146 intron grp + chr2L 16694189 intron grp + chr2L 16694232 intron grp + chr2L_7_16690001 chr2L_16690001 RAL-808_75b 180 chr2L 16889853 16889869 chr2L 16889922 16889952 4 76 1.5 3.5 2.5 1.1 99 chr2L 16889853 intron tweek + chr2L 16889902 intron tweek + chr2L 16889952 intron,5` UTR tweek +,CG42556 + chr2L_4_16885001 chr2L_16885001 RAL-808_75b 181 chr2L 16927747 16927756 chr2L 16927815 16927837 6 77 3.5 1.5 2.5 1.7 90 chr2L 16927747 intergenic not near genes chr2L 16927792 intergenic not near genes chr2L 16927837 intergenic not near genes chr2L_6_16925001 chr2L_16925001 RAL-808_75b 182 chr2L 17088845 17088875 chr2L 17088923 17088959 9 82 0.5 3.0 1.8 3.2 114 chr2L 17088845 3` UTR CG12620 + chr2L 17088902 3` UTR CG12620 + chr2L 17088959 3` UTR CG12620 + chr2L_9_17085001 chr2L_17085001 RAL-808_75b 183 chr2L 17163547 17163577 chr2L 17163877 17163907 6 321 1.0 1.5 1.2 2.7 360 chr2L 17163547 intron,intron CG34106 +,beat-IIIa + chr2L 17163727 intron,intron CG34106 +,beat-IIIa + chr2L 17163907 intron,intron CG34106 +,beat-IIIa + chr2L_6_17160001 chr2L_17160001 RAL-808_75b 184 chr2L 17176270 17176292 chr2L 17176350 17176366 4 77 5.5 1.5 3.5 0.9 96 chr2L 17176270 intergenic Gr36a + chr2L 17176318 intergenic Gr36a + chr2L 17176366 intergenic Gr36a + chr2L_4_17175001 chr2L_17175001 RAL-808_75b 185 chr2L 17199177 17199192 chr2L 17200643 17200656 hobo 4 1466 1.5 4.0 2.8 1.1 1479 chr2L 17199177 intron beat-IIIc - chr2L 17199916 intron beat-IIIc - chr2L 17200656 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 RAL-808_75b 186 chr2L 17273190 17273231 chr2L 17277973 17277984 F-element 7 4771 2.0 4.0 3.0 1.8 4794 chr2L 17273190 intergenic not near genes chr2L 17275587 intergenic not near genes chr2L 17277984 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-808_75b 187 chr2L 17399342 17399359 chr2L 17399423 17399426 4 80 1.0 0.0 0.5 2.7 84 chr2L 17399342 intron CLIP-190 + chr2L 17399384 intron CLIP-190 + chr2L 17399426 intron CLIP-190 + chr2L_4_17395001 chr2L_17395001 RAL-808_75b 188 chr2L 17579902 17579918 chr2L 17579980 17579984 4 75 3.0 1.5 2.2 1.2 82 chr2L 17579902 5` UTR CR45698 + chr2L 17579943 5` UTR CR45698 + chr2L 17579984 5` UTR CR45698 + chr2L_4_17575001 chr2L_17575001 RAL-808_75b 189 chr2L 17602664 17602693 chr2L 17602747 17602774 5 83 3.0 3.0 3.0 1.2 110 chr2L 17602664 exon Sytalpha + chr2L 17602719 intron Sytalpha + chr2L 17602774 intron Sytalpha + chr2L_5_17600001 chr2L_17600001 RAL-808_75b 190 chr2L 17701950 17701982 chr2L 17702039 17702041 10 81 3.0 5.0 4.0 2.0 91 chr2L 17701950 intron CadN - chr2L 17701996 intron CadN - chr2L 17702041 intron CadN - chr2L_10_17700001 chr2L_17700001 RAL-808_75b 191 chr2L 17819919 17819943 chr2L 17825123 17825147 copia 5 5204 1.5 1.0 1.2 2.3 5228 chr2L 17819919 intron CadN2 - chr2L 17822533 intron CadN2 - chr2L 17825147 intron CadN2 - chr2L_5_17820001 chr2L_17820001 RAL-808_75b 192 chr2L 17858088 17858103 chr2L 17858160 17858161 5 74 3.5 1.5 2.5 1.4 73 chr2L 17858088 intron CadN2 - chr2L 17858124 intron CadN2 - chr2L 17858161 intron CadN2 - chr2L_5_17855001 chr2L_17855001 RAL-808_75b 193 chr2L 17880005 17880030 chr2L 17880084 17880095 10 76 1.0 2.5 1.8 3.6 90 chr2L 17880005 intergenic not near genes chr2L 17880050 intergenic not near genes chr2L 17880095 intergenic not near genes chr2L_10_17880001 chr2L_17880001 RAL-808_75b 194 chr2L 17951946 17951979 chr2L 17953413 17953420 hobo 6 1460 2.0 0.5 1.2 2.7 1474 chr2L 17951946 intergenic CR44398 -,CR44397 - chr2L 17952683 intergenic not near genes chr2L 17953420 intergenic not near genes chr2L_6_17950001 chr2L_17950001 RAL-808_75b 195 chr2L 18111242 18111262 chr2L 18111333 18111353 5 91 4.0 3.0 3.5 1.1 111 chr2L 18111242 intergenic not near genes chr2L 18111298 intergenic not near genes chr2L 18111353 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-808_75b 196 chr2L 18329949 18329967 chr2L 18330058 18330058 5 107 2.0 2.5 2.2 1.6 109 chr2L 18329949 intron Fas3 + chr2L 18330004 intron Fas3 + chr2L 18330058 intron Fas3 + chr2L_5_18330001 chr2L_18330001 RAL-808_75b 197 chr2L 16217660 16217660 chr2L 18331928 18331928 F-element 5 2114268 19.5 13.5 16.5 0.3 2114268 chr2L 16217660 intergenic not near genes chr2L 17274794 intergenic not near genes chr2L 18331928 intron Fas3 + chr2L_5_17270001 chr2L_17270001 RAL-808_75b 198 chr2L 18408029 18408060 chr2L 18412812 18412817 Doc 6 4775 1.0 5.0 3.0 1.5 4788 chr2L 18408029 intergenic not near genes chr2L 18410423 intergenic not near genes chr2L 18412817 intergenic not near genes chr2L_6_18410001 chr2L_18410001 RAL-808_75b 199 chr2L 18449491 18449509 chr2L 18449578 18449596 6 84 4.0 5.0 4.5 1.1 105 chr2L 18449491 intergenic bsf - chr2L 18449544 3` UTR bsf - chr2L 18449596 3` UTR bsf - chr2L_6_18445001 chr2L_18445001 RAL-808_75b 200 chr2L 18812559 18812588 chr2L 18812822 18812851 8 262 2.0 4.0 3.0 2.0 292 chr2L 18812559 intergenic CG17325 +,CG42305 + chr2L 18812705 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812851 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_8_18810001 chr2L_18810001 RAL-808_75b 201 chr2L 18816034 18816057 chr2L 18816247 18816271 5 209 4.5 4.5 4.5 0.9 237 chr2L 18816034 intergenic not near genes chr2L 18816152 intergenic not near genes chr2L 18816271 intergenic not near genes chr2L_5_18815001 chr2L_18815001 RAL-808_75b 202 chr2L 18902626 18902654 chr2L 18902905 18902932 4 276 1.5 0.0 0.8 2.2 306 chr2L 18902626 intergenic not near genes chr2L 18902779 intergenic not near genes chr2L 18902932 intergenic not near genes chr2L_4_18900001 chr2L_18900001 RAL-808_75b 203 chr2L 19024096 19024097 chr2L 21768291 21768294 4 2744196 10.0 23.0 16.5 0.2 2744198 chr2L 19024096 3` UTR CR43700 - chr2L 20396195 intron CG10947 - chr2L 21768294 intron CG31612 - chr2L_4_20395001 chr2L_20395001 RAL-808_75b 204 chr2L 19147368 19147388 chr2L 19154403 19154423 297 5 7032 6.0 3.5 4.8 0.9 7055 chr2L 19147368 intron brat + chr2L 19150896 intron brat + chr2L 19154423 intron brat + chr2L_5_19150001 chr2L_19150001 RAL-808_75b 205 chr2L 19163371 19163394 chr2L 19163452 19163458 5 76 3.5 7.5 5.5 0.8 87 chr2L 19163371 intron brat + chr2L 19163414 intron brat + chr2L 19163458 intron brat + chr2L_5_19160001 chr2L_19160001 RAL-808_75b 206 chr2L 19199675 19199699 chr2L 19199743 19199775 9 66 7.5 2.5 5.0 1.5 100 chr2L 19199675 intron drl + chr2L 19199725 intron drl + chr2L 19199775 intron drl + chr2L_9_19195001 chr2L_19195001 RAL-808_75b 207 chr2L 19209618 19209647 chr2L 19209703 19209717 8 81 2.0 3.0 2.5 2.3 99 chr2L 19209618 intergenic not near genes chr2L 19209668 intergenic not near genes chr2L 19209717 intergenic not near genes chr2L_8_19205001 chr2L_19205001 RAL-808_75b 208 chr2L 19227083 19227117 chr2L 19227174 19227199 4 83 1.5 3.5 2.5 1.1 116 chr2L 19227083 intergenic not near genes chr2L 19227141 intergenic not near genes chr2L 19227199 intergenic not near genes chr2L_4_19225001 chr2L_19225001 RAL-808_75b 209 chr2L 19342956 19342989 chr2L 19343041 19343072 6 79 3.0 5.5 4.2 1.2 116 chr2L 19342956 intron dnt - chr2L 19343014 intron dnt - chr2L 19343072 intron dnt - chr2L_6_19340001 chr2L_19340001 RAL-808_75b 210 chr2L 19345040 19345050 chr2L 19357217 19357232 blood 5 12191 3.0 2.0 2.5 1.4 12192 chr2L 19345040 intron dnt - chr2L 19351136 intron dnt - chr2L 19357232 intron dnt - chr2L_5_19350001 chr2L_19350001 RAL-808_75b 211 chr2L 19374499 19374517 chr2L 19374602 19374620 4 106 2.5 2.0 2.2 1.2 121 chr2L 19374499 intergenic not near genes chr2L 19374560 intergenic not near genes chr2L 19374620 intergenic not near genes chr2L_4_19370001 chr2L_19370001 RAL-808_75b 212 chr2L 19380512 19380529 chr2L 19380586 19380603 6 78 1.5 2.0 1.8 2.1 91 chr2L 19380512 intergenic CG17350 + chr2L 19380558 intergenic CG17350 + chr2L 19380603 intergenic CG17350 + chr2L_6_19380001 chr2L_19380001 RAL-808_75b 213 chr2L 19384003 19384024 chr2L 19384092 19384097 6 90 3.5 3.0 3.2 1.4 94 chr2L 19384003 exon fon - chr2L 19384050 exon fon - chr2L 19384097 exon fon - chr2L_6_19380001 chr2L_19380001 RAL-808_75b 214 chr2L 19406101 19406132 chr2L 19406185 19406189 7 77 2.5 8.0 5.2 1.1 88 chr2L 19406101 intron Pax - chr2L 19406145 intron Pax - chr2L 19406189 intron Pax - chr2L_7_19405001 chr2L_19405001 RAL-808_75b 215 chr2L 19407722 19407738 chr2L 19407919 19407931 6 196 2.0 2.5 2.2 1.9 209 chr2L 19407722 intron Pax - chr2L 19407826 intron Pax - chr2L 19407931 intron Pax - chr2L_6_19405001 chr2L_19405001 RAL-808_75b 216 chr2L 19544604 19544630 chr2L 19544665 19544682 7 55 5.0 4.0 4.5 1.3 78 chr2L 19544604 exon ref(2)P + chr2L 19544643 exon ref(2)P + chr2L 19544682 exon ref(2)P + chr2L_7_19540001 chr2L_19540001 RAL-808_75b 217 chr2L 19620089 19620130 chr2L 19621078 19621094 jockey 9 977 3.5 2.0 2.8 2.4 1005 chr2L 19620089 intron Lar + chr2L 19620592 intron Lar + chr2L 19621094 intron Lar + chr2L_9_19620001 chr2L_19620001 RAL-808_75b 218 chr2L 19652572 19652604 chr2L 19674006 19674038 opus 4 21434 4.5 2.5 3.5 0.9 21466 chr2L 19652572 intron Lar + chr2L 19663305 intron Lar + chr2L 19674038 intron Lar + chr2L_4_19660001 chr2L_19660001 RAL-808_75b 219 chr2L 19737368 19737381 chr2L 19740831 19740841 1360 8 3460 4.0 6.0 5.0 1.3 3473 chr2L 19737368 intergenic Nf-YB + chr2L 19739104 intergenic not near genes chr2L 19740841 intergenic not near genes chr2L_8_19735001 chr2L_19735001 RAL-808_75b 220 chr2L 19762808 19762834 chr2L 19763049 19763076 pogo 5 239 4.0 0.5 2.2 1.6 268 chr2L 19762808 5` UTR fbp - chr2L 19762942 intron fbp - chr2L 19763076 intron fbp - chr2L_5_19760001 chr2L_19760001 RAL-808_75b 221 chr2L 19911293 19911314 chr2L 19911381 19911393 9 85 7.0 5.0 6.0 1.3 100 chr2L 19911293 intron,3` UTR sick +,CR43097 - chr2L 19911343 intron,3` UTR sick +,CR43097 - chr2L 19911393 intron,3` UTR sick +,CR43097 - chr2L_9_19910001 chr2L_19910001 RAL-808_75b 222 chr2L 19964845 19964858 chr2L 19964918 19964930 9 75 6.0 5.0 5.5 1.4 85 chr2L 19964845 exon CG10680 + chr2L 19964888 exon CG10680 + chr2L 19964930 exon CG10680 + chr2L_9_19960001 chr2L_19960001 RAL-808_75b 223 chr2L 19964860 19964869 chr2L 19964916 19964955 5 72 5.0 4.5 4.8 0.9 95 chr2L 19964860 exon CG10680 + chr2L 19964908 exon CG10680 + chr2L 19964955 exon CG10680 + chr2L_5_19960001 chr2L_19960001 RAL-808_75b 224 chr2L 20041435 20041443 chr2L 20041520 20041528 4 85 9.5 6.0 7.8 0.5 93 chr2L 20041435 intron sNPF + chr2L 20041482 intron sNPF + chr2L 20041528 intron sNPF + chr2L_4_20040001 chr2L_20040001 RAL-808_75b 225 chr2L 20041447 20041463 chr2L 20041515 20041547 13 79 4.0 4.5 4.2 2.5 100 chr2L 20041447 intron sNPF + chr2L 20041497 intron sNPF + chr2L 20041547 intron sNPF + chr2L_13_20040001 chr2L_20040001 RAL-808_75b 226 chr2L 20085480 20085498 chr2L 20085556 20085588 10 86 2.0 4.0 3.0 2.5 108 chr2L 20085480 intron neb + chr2L 20085534 intron neb + chr2L 20085588 intron neb + chr2L_10_20085001 chr2L_20085001 RAL-808_75b 227 chr2L 20124326 20124356 chr2L 20124404 20124405 4 71 1.5 0.5 1.0 2.0 79 chr2L 20124326 intergenic not near genes chr2L 20124366 intergenic not near genes chr2L 20124405 intergenic not near genes chr2L_4_20120001 chr2L_20120001 RAL-808_75b 228 chr2L 20269615 20269632 chr2L 20269837 20269856 8 222 3.5 5.0 4.2 1.5 241 chr2L 20269615 intergenic not near genes chr2L 20269736 intergenic not near genes chr2L 20269856 intergenic not near genes chr2L_8_20265001 chr2L_20265001 RAL-808_75b 229 chr2L 20296523 20296540 chr2L 20296589 20296621 5 72 2.5 1.0 1.8 1.8 98 chr2L 20296523 intergenic CR43414 - chr2L 20296572 intergenic CR43414 - chr2L 20296621 intergenic CR43414 - chr2L_5_20295001 chr2L_20295001 RAL-808_75b 230 chr2L 20310888 20310919 chr2L 20310960 20310988 4 72 0.5 5.0 2.8 1.1 100 chr2L 20310888 intergenic spir + chr2L 20310938 intergenic spir + chr2L 20310988 intergenic spir + chr2L_4_20310001 chr2L_20310001 RAL-808_75b 231 chr2L 20369414 20369441 chr2L 20369631 20369642 6 211 0.5 4.5 2.5 1.7 228 chr2L 20369414 intergenic not near genes chr2L 20369528 intergenic not near genes chr2L 20369642 intergenic not near genes chr2L_6_20365001 chr2L_20365001 RAL-808_75b 232 chr2L 20383276 20383304 chr2L 20383358 20383362 4 72 1.5 0.5 1.0 2.0 86 chr2L 20383276 intergenic not near genes chr2L 20383319 intergenic not near genes chr2L 20383362 intergenic not near genes chr2L_4_20380001 chr2L_20380001 RAL-808_75b 233 chr2L 20396805 20396832 chr2L 20396880 20396908 6 76 2.5 0.5 1.5 2.4 103 chr2L 20396805 intron CG10947 - chr2L 20396856 intron CG10947 - chr2L 20396908 intron CG10947 - chr2L_6_20395001 chr2L_20395001 RAL-808_75b 234 chr2L 20568661 20568676 chr2L 20569051 20569066 X-element 6 388 4.0 2.5 3.2 1.4 405 chr2L 20568661 intron CR45347 + chr2L 20568864 intron CR45347 + chr2L 20569066 intron CR45347 + chr2L_6_20565001 chr2L_20565001 RAL-808_75b 235 chr2L 20576219 20576247 chr2L 20583686 20583708 blood 4 7461 4.0 2.0 3.0 1.0 7489 chr2L 20576219 intergenic CR45347 + chr2L 20579964 intergenic not near genes chr2L 20583708 3` UTR CR44909 - chr2L_4_20575001 chr2L_20575001 RAL-808_75b 236 chr2L 20668687 20668723 chr2L 20668763 20668794 5 69 1.5 0.5 1.0 2.5 107 chr2L 20668687 intron CG31678 - chr2L 20668740 intron CG31678 - chr2L 20668794 intron CG31678 - chr2L_5_20665001 chr2L_20665001 RAL-808_75b 237 chr2L 20821503 20821518 chr2L 20821648 20821665 5 147 6.0 3.5 4.8 0.9 162 chr2L 20821503 intergenic not near genes chr2L 20821584 intergenic not near genes chr2L 20821665 intergenic not near genes chr2L_5_20820001 chr2L_20820001 RAL-808_75b 238 chr2L 20829580 20829610 chr2L 20829699 20829701 8 111 1.5 3.5 2.5 2.3 121 chr2L 20829580 intergenic CG31673 + chr2L 20829640 5` UTR CG31673 + chr2L 20829701 exon CG31673 + chr2L_8_20825001 chr2L_20825001 RAL-808_75b 239 chr2L 20901477 20901485 chr2L 20902619 20902648 1360 4 1154 2.5 6.0 4.2 0.8 1171 chr2L 20901477 intron,intron CG43739 -,sky - chr2L 20902062 intron,intron CG43739 -,sky - chr2L 20902648 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-808_75b 240 chr2L 20901487 20901491 chr2L 20902617 20902625 1360 4 1148 0.5 6.0 3.2 1.0 1138 chr2L 20901487 intron,intron CG43739 -,sky - chr2L 20902056 intron,intron CG43739 -,sky - chr2L 20902625 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-808_75b 241 chr2L 20967084 20967107 chr2L 20967170 20967179 6 83 2.0 0.5 1.2 2.7 95 chr2L 20967084 3` UTR CG42238 - chr2L 20967132 3` UTR CG42238 - chr2L 20967179 3` UTR CG42238 - chr2L_6_20965001 chr2L_20965001 RAL-808_75b 242 chr2L 20976640 20976681 chr2L 20981455 20981487 X-element 13 4809 2.0 5.0 3.5 2.9 4847 chr2L 20976640 intron CG42238 - chr2L 20979064 intron CG42238 - chr2L 20981487 intron CG42238 - chr2L_13_20975001 chr2L_20975001 RAL-808_75b 243 chr2L 20991037 20991052 chr2L 20991115 20991129 4 77 7.0 4.0 5.5 0.6 92 chr2L 20991037 intron CG42238 - chr2L 20991083 intron CG42238 - chr2L 20991129 intron CG42238 - chr2L_4_20990001 chr2L_20990001 RAL-808_75b 244 chr2L 21020273 21020311 chr2L 21023950 21023983 NOF 9 3674 2.5 3.0 2.8 2.4 3710 chr2L 21020273 intron CG42238 - chr2L 21022128 intron CG42238 - chr2L 21023983 intron CG42238 - chr2L_9_21020001 chr2L_21020001 RAL-808_75b 245 chr2L 21113687 21113715 chr2L 21113778 21113778 8 87 7.0 3.5 5.2 1.3 91 chr2L 21113687 intron Nhe2 + chr2L 21113732 intron Nhe2 + chr2L 21113778 intron Nhe2 + chr2L_8_21110001 chr2L_21110001 RAL-808_75b 246 chr2L 21286604 21286624 chr2L 21286682 21286686 5 73 2.5 2.5 2.5 1.4 82 chr2L 21286604 exon Mio - chr2L 21286645 intron Mio - chr2L 21286686 intron Mio - chr2L_5_21285001 chr2L_21285001 RAL-808_75b 247 chr2L 21315803 21315826 chr2L 21315881 21315901 7 73 1.5 1.5 1.5 2.8 98 chr2L 21315803 intron crc + chr2L 21315852 intron crc + chr2L 21315901 intron crc + chr2L_7_21315001 chr2L_21315001 RAL-808_75b 248 chr2L 21333638 21333646 chr2L 21333766 21333787 5 141 4.5 2.5 3.5 1.1 149 chr2L 21333638 intron dimm + chr2L 21333712 intron dimm + chr2L 21333787 intron dimm + chr2L_5_21330001 chr2L_21330001 RAL-808_75b 249 chr2L 21981685 21981716 chr2L 21990849 21990861 roo 8 9162 1.5 3.5 2.5 2.3 9176 chr2L 21981685 exon CG2528 - chr2L 21986273 intron CG2528 - chr2L 21990861 exon CG2528 - chr2L_8_21985001 chr2L_21985001 RAL-808_75b 250 chr2L 22191852 22192057 chr2L 22191940 22192135 11 84 3.5 2.5 3.0 2.8 283 chr2L 22191852 intron Ir40a - chr2L 22191994 intron Ir40a - chr2L 22192135 intron Ir40a - chr2L_11_22190001 chr2L_22190001 RAL-808_75b 251 chr2L 22239452 22239458 chr2L 22239508 22239537 4 62 5.5 2.5 4.0 0.8 85 chr2L 22239452 3` UTR CR43765 - chr2L 22239494 3` UTR CR43765 - chr2L 22239537 3` UTR CR43765 - chr2L_4_22235001 chr2L_22235001 RAL-808_75b 252 chr2L 22350262 22350293 chr2L 22350364 22350376 6 93 3.0 4.0 3.5 1.3 114 chr2L 22350262 intron CG17018 + chr2L 22350319 intron CG17018 + chr2L 22350376 intron CG17018 + chr2L_6_22350001 chr2L_22350001 RAL-808_75b 253 chr2L 22510426 22510438 chr2L 22510620 22510629 5 197 8.0 1.5 4.8 0.9 203 chr2L 22510426 intergenic not near genes chr2L 22510528 intergenic not near genes chr2L 22510629 intergenic not near genes chr2L_5_22510001 chr2L_22510001 RAL-808_75b 254 chr2L 22545981 22546006 chr2L 22546073 22546073 6 88 7.5 4.5 6.0 0.9 92 chr2L 22545981 intron CG17490 + chr2L 22546027 intron CG17490 + chr2L 22546073 intron CG17490 + chr2L_6_22545001 chr2L_22545001 RAL-808_75b 255 chr2L 22548937 22548945 chr2L 22550140 22550170 1360 6 1216 0.5 3.5 2.0 2.0 1233 chr2L 22548937 intergenic CG17490 + chr2L 22549554 intergenic not near genes chr2L 22550170 intergenic CG17493 + chr2L_6_22545001 chr2L_22545001 RAL-808_75b 256 chr2L 22679812 22679818 chr2L 22684566 22684587 F-element 4 4766 3.0 4.5 3.8 0.8 4775 chr2L 22679812 intron CG40006 - chr2L 22682200 intron CG40006 - chr2L 22684587 intron CG40006 - chr2L_4_22680001 chr2L_22680001 RAL-808_75b 257 chr2L 22693932 22693951 chr2L 22694004 22694038 11 75 2.0 5.0 3.5 2.4 106 chr2L 22693932 intron CG40006 - chr2L 22693985 intron CG40006 - chr2L 22694038 intron CG40006 - chr2L_11_22690001 chr2L_22690001 RAL-808_75b 258 chr2L 23241845 23241877 chr2L 23241925 23241931 5 68 1.0 4.5 2.8 1.3 86 chr2L 23241845 intergenic not near genes chr2L 23241888 intergenic not near genes chr2L 23241931 intergenic not near genes chr2L_5_23240001 chr2L_23240001 RAL-808_75b 259 chr2R 1082365 1082385 chr2R 1087128 1087128 Doc 8 4764 6.5 3.5 5.0 1.3 4763 chr2R 1082365 intron rl + chr2R 1084746 intron rl + chr2R 1087128 intron rl + chr2R_8_1080001 chr2R_1080001 RAL-808_75b 260 chr2R 1365872 1365885 chr2R 1365984 1365997 7 111 4.0 5.0 4.5 1.3 125 chr2R 1365872 intron l(2)41Ab + chr2R 1365934 intron l(2)41Ab + chr2R 1365997 intron l(2)41Ab + chr2R_7_1365001 chr2R_1365001 RAL-808_75b 261 chr2R 3291934 3292099 chr2R 3915098 3915260 8 623157 7.0 17.5 12.2 0.6 623326 chr2R 3291934 intergenic not near genes chr2R 3603597 intergenic not near genes chr2R 3915260 intron uex - chr2R_8_3600001 chr2R_3600001 RAL-808_75b 262 chr2R 3515286 3515311 chr2R 3515368 3515396 6 83 5.0 6.5 5.8 0.9 110 chr2R 3515286 intergenic not near genes chr2R 3515341 intergenic not near genes chr2R 3515396 intergenic not near genes chr2R_6_3515001 chr2R_3515001 RAL-808_75b 263 chr2R 4312965 4312986 chr2R 4313035 4313070 6 72 1.5 3.0 2.2 1.9 105 chr2R 4312965 intergenic not near genes chr2R 4313018 intergenic not near genes chr2R 4313070 intergenic not near genes chr2R_6_4310001 chr2R_4310001 RAL-808_75b 264 chr2R 4602863 4602874 chr2R 4603199 4603229 6 346 4.0 3.0 3.5 1.3 366 chr2R 4602863 intron p120ctn + chr2R 4603046 intron p120ctn + chr2R 4603229 intron p120ctn + chr2R_6_4600001 chr2R_4600001 RAL-808_75b 265 chr2R 4622977 4622988 chr2R 4624110 4624147 1360 4 1149 2.5 0.5 1.5 1.6 1170 chr2R 4622977 intergenic CR44101 - chr2R 4623562 intergenic not near genes chr2R 4624147 intergenic not near genes chr2R_4_4620001 chr2R_4620001 RAL-808_75b 266 chr2R 4838873 4838903 chr2R 4840396 4840408 transib2 7 1518 3.0 4.0 3.5 1.6 1535 chr2R 4838873 intergenic not near genes chr2R 4839640 intergenic not near genes chr2R 4840408 intergenic not near genes chr2R_7_4835001 chr2R_4835001 RAL-808_75b 267 chr2R 5075224 5075255 chr2R 5075352 5075354 9 117 5.0 0.5 2.8 2.4 130 chr2R 5075224 intergenic not near genes chr2R 5075289 intergenic not near genes chr2R 5075354 intergenic not near genes chr2R_9_5075001 chr2R_5075001 RAL-808_75b 268 chr2R 5075353 5075373 chr2R 5075765 5075788 8 414 0.5 4.0 2.2 2.5 435 chr2R 5075353 intergenic not near genes chr2R 5075570 intergenic not near genes chr2R 5075788 intergenic not near genes chr2R_8_5075001 chr2R_5075001 RAL-808_75b 269 chr2R 5192240 5192359 chr2R 5192318 5192403 5 64 0.5 2.0 1.2 2.3 163 chr2R 5192240 intron Nipped-A - chr2R 5192322 intron Nipped-A - chr2R 5192403 intron Nipped-A - chr2R_5_5190001 chr2R_5190001 RAL-808_75b 270 chr2R 5476380 5476385 chr2R 5476897 5476929 5 530 1.5 5.0 3.2 1.2 549 chr2R 5476380 intron CG30440 - chr2R 5476654 intron CG30440 - chr2R 5476929 intron CG30440 - chr2R_5_5475001 chr2R_5475001 RAL-808_75b 271 chr2R 5491713 5491746 chr2R 5491854 5491887 9 138 3.5 2.5 3.0 2.2 174 chr2R 5491713 intron CG30440 - chr2R 5491800 intron CG30440 - chr2R 5491887 intron CG30440 - chr2R_9_5490001 chr2R_5490001 RAL-808_75b 272 chr2R 5509518 5509549 chr2R 5509614 5509645 10 93 2.0 3.0 2.5 2.9 127 chr2R 5509518 intron CG30438 + chr2R 5509582 intron CG30438 + chr2R 5509645 intron CG30438 + chr2R_10_5505001 chr2R_5505001 RAL-808_75b 273 chr2R 5543208 5543217 chr2R 5547278 5547299 invader1 4 4080 1.5 1.0 1.2 1.8 4091 chr2R 5543208 intron CG30438 + chr2R 5545254 intron CG30438 + chr2R 5547299 intron CG30438 + chr2R_4_5545001 chr2R_5545001 RAL-808_75b 274 chr2R 5581399 5581410 chr2R 5627608 5627619 5 46208 0.0 8.5 4.2 1.0 46220 chr2R 5581399 intergenic not near genes chr2R 5604509 exon Fis1 - chr2R 5627619 intergenic not near genes chr2R_5_5600001 chr2R_5600001 RAL-808_75b 275 chr2R 5869274 5869308 chr2R 5874350 5874384 flea 10 5073 2.0 2.5 2.2 3.1 5110 chr2R 5869274 intergenic not near genes chr2R 5871829 intergenic not near genes chr2R 5874384 intergenic not near genes chr2R_10_5870001 chr2R_5870001 RAL-808_75b 276 chr2R 5917780 5917790 chr2R 5917853 5917868 4 77 7.0 2.0 4.5 0.7 88 chr2R 5917780 intron CG43366 + chr2R 5917824 intron CG43366 + chr2R 5917868 intron CG43366 + chr2R_4_5915001 chr2R_5915001 RAL-808_75b 277 chr2R 5917792 5917804 chr2R 5917850 5917883 6 72 3.0 1.0 2.0 2.0 91 chr2R 5917792 intron CG43366 + chr2R 5917838 intron CG43366 + chr2R 5917883 intron CG43366 + chr2R_6_5915001 chr2R_5915001 RAL-808_75b 278 chr2R 5947935 5947966 chr2R 5948085 5948117 10 146 3.0 0.5 1.8 3.6 182 chr2R 5947935 intergenic not near genes chr2R 5948026 intergenic not near genes chr2R 5948117 intergenic not near genes chr2R_10_5945001 chr2R_5945001 RAL-808_75b 279 chr2R 6033442 6033476 chr2R 6033527 6033561 12 83 0.5 2.0 1.2 5.5 119 chr2R 6033442 intron SCAP - chr2R 6033502 intron SCAP - chr2R 6033561 intron SCAP - chr2R_12_6030001 chr2R_6030001 RAL-808_75b 280 chr2R 6050317 6050340 chr2R 6050397 6050401 4 74 4.0 0.5 2.2 1.2 84 chr2R 6050317 intergenic CG34212 - chr2R 6050359 intergenic CG34212 - chr2R 6050401 intergenic CG34212 - chr2R_4_6050001 chr2R_6050001 RAL-808_75b 281 chr2R 6065758 6065780 chr2R 6065861 6065892 4 103 3.0 1.5 2.2 1.2 134 chr2R 6065758 intron CCHa2-R + chr2R 6065825 intron CCHa2-R + chr2R 6065892 exon CCHa2-R + chr2R_4_6065001 chr2R_6065001 RAL-808_75b 282 chr2R 6096727 6096745 chr2R 6101910 6101937 BS 4 5183 6.5 4.0 5.2 0.6 5210 chr2R 6096727 intron EcR - chr2R 6099332 intron EcR - chr2R 6101937 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-808_75b 283 chr2R 6140089 6140121 chr2R 6140226 6140235 5 132 2.0 4.0 3.0 1.2 146 chr2R 6140089 intron EcR - chr2R 6140162 intron EcR - chr2R 6140235 intron EcR - chr2R_5_6140001 chr2R_6140001 RAL-808_75b 284 chr2R 6597871 6597899 chr2R 6597959 6597966 7 84 3.0 3.5 3.2 1.7 95 chr2R 6597871 intron jing + chr2R 6597918 intron jing + chr2R 6597966 intron jing + chr2R_7_6595001 chr2R_6595001 RAL-808_75b 285 chr2R 6607931 6607953 chr2R 6608032 6608050 5 101 4.5 2.5 3.5 1.1 119 chr2R 6607931 intron jing + chr2R 6607990 intron jing + chr2R 6608050 intron jing + chr2R_5_6605001 chr2R_6605001 RAL-808_75b 286 chr2R 6865368 6865399 chr2R 6865452 6865465 5 72 2.0 3.5 2.8 1.3 97 chr2R 6865368 exon coro - chr2R 6865416 intron coro - chr2R 6865465 intron coro - chr2R_5_6865001 chr2R_6865001 RAL-808_75b 287 chr2R 6897462 6897497 chr2R 6897552 6897587 13 82 4.0 4.0 4.0 2.6 125 chr2R 6897462 intron CG30158 + chr2R 6897524 intron CG30158 + chr2R 6897587 intron CG30158 + chr2R_13_6895001 chr2R_6895001 RAL-808_75b 288 chr2R 6978643 6978663 chr2R 6978826 6978846 5 183 2.5 2.5 2.5 1.4 203 chr2R 6978643 intron vimar - chr2R 6978744 intron vimar - chr2R 6978846 intron vimar - chr2R_5_6975001 chr2R_6975001 RAL-808_75b 289 chr2R 7139949 7139955 chr2R 7141416 7141447 hopper2 7 1483 2.5 7.0 4.8 1.2 1498 chr2R 7139949 intergenic not near genes chr2R 7140698 intergenic not near genes chr2R 7141447 intergenic not near genes chr2R_7_7140001 chr2R_7140001 RAL-808_75b 290 chr2R 7196567 7196603 chr2R 7201339 7201378 F-element 4 4774 1.0 0.0 0.5 2.7 4811 chr2R 7196567 intron pk + chr2R 7198972 intron pk + chr2R 7201378 intron pk + chr2R_4_7195001 chr2R_7195001 RAL-808_75b 291 chr2R 7235837 7235853 chr2R 7240910 7240930 jockey 6 5082 4.0 2.5 3.2 1.4 5093 chr2R 7235837 intergenic not near genes chr2R 7238384 intergenic not near genes chr2R 7240930 intergenic not near genes chr2R_6_7235001 chr2R_7235001 RAL-808_75b 292 chr2R 7459301 7459311 chr2R 7459370 7459371 4 69 2.5 0.0 1.2 1.8 70 chr2R 7459301 intergenic CG11141 -,Inos - chr2R 7459336 intergenic CG11141 -,Inos - chr2R 7459371 intergenic CG11141 -,Inos - chr2R_4_7455001 chr2R_7455001 RAL-808_75b 293 chr2R 7608409 7608432 chr2R 7613609 7613635 I-element 5 5202 3.0 0.5 1.8 1.8 5226 chr2R 7608409 intron CG1358 - chr2R 7611022 intron CG1358 - chr2R 7613635 intron CG1358 - chr2R_5_7610001 chr2R_7610001 RAL-808_75b 294 chr2R 7714088 7714110 chr2R 7714161 7714186 4 72 3.0 0.5 1.8 1.4 98 chr2R 7714088 exon CG1942 + chr2R 7714137 3` UTR CG1942 + chr2R 7714186 intergenic CG1942 + chr2R_4_7710001 chr2R_7710001 RAL-808_75b 295 chr2R 7815674 7815685 chr2R 7822142 7822154 Burdock 4 6468 7.5 3.0 5.2 0.6 6480 chr2R 7815674 intergenic CG1882 + chr2R 7818914 intergenic not near genes chr2R 7822154 3` UTR cathD - chr2R_4_7815001 chr2R_7815001 RAL-808_75b 296 chr2R 7815694 7815702 chr2R 7822140 7822165 Burdock 4 6456 5.5 3.0 4.2 0.8 6471 chr2R 7815694 intergenic CG1882 + chr2R 7818930 intergenic not near genes chr2R 7822165 3` UTR cathD - chr2R_4_7815001 chr2R_7815001 RAL-808_75b 297 chr2R 7861465 7861492 chr2R 7861677 7861691 10 210 2.5 5.0 3.8 2.1 226 chr2R 7861465 intron Dgk - chr2R 7861578 intron Dgk - chr2R 7861691 intron Dgk - chr2R_10_7860001 chr2R_7860001 RAL-808_75b 298 chr2R 7869190 7869202 chr2R 7873976 7873988 Doc 4 4786 5.0 3.5 4.2 0.8 4798 chr2R 7869190 intron Dgk - chr2R 7871589 intron Dgk - chr2R 7873988 intron Dgk - chr2R_4_7870001 chr2R_7870001 RAL-808_75b 299 chr2R 8006847 8006880 chr2R 8007006 8007007 7 149 2.0 3.5 2.8 1.8 160 chr2R 8006847 intergenic Odc1 +,Odc2 + chr2R 8006927 intergenic Odc1 +,Odc2 + chr2R 8007007 intergenic Odc2 +,Odc1 + chr2R_7_8005001 chr2R_8005001 RAL-808_75b 300 chr2R 8015677 8015681 chr2R 8017667 8017700 4 2010 2.5 5.0 3.8 0.8 2023 chr2R 8015677 intergenic mir-4981 + chr2R 8016688 intergenic not near genes chr2R 8017700 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-808_75b 301 chr2R 8209059 8209083 chr2R 8209138 8209139 7 73 3.5 0.0 1.8 2.5 80 chr2R 8209059 intron LRP1 + chr2R 8209099 intron LRP1 + chr2R 8209139 intron LRP1 + chr2R_7_8205001 chr2R_8205001 RAL-808_75b 302 chr2R 8277635 8277668 chr2R 8277730 8277763 12 88 1.5 1.0 1.2 5.5 128 chr2R 8277635 5` UTR CR44280 + chr2R 8277699 5` UTR CR44280 + chr2R 8277763 5` UTR CR44280 + chr2R_12_8275001 chr2R_8275001 RAL-808_75b 303 chr2R 8330866 8330894 chr2R 8331352 8331379 roo 6 481 4.5 1.5 3.0 1.5 513 chr2R 8330866 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331379 intron pdm3 + chr2R_6_8330001 chr2R_8330001 RAL-808_75b 304 chr2R 8454930 8454951 chr2R 8455873 8455895 7 944 28.5 14.0 21.2 0.3 965 chr2R 8454930 exon Mal-A2 + chr2R 8455412 exon Mal-A2 + chr2R 8455895 intergenic Mal-A3 -,Mal-A2 + chr2R_7_8455001 chr2R_8455001 RAL-808_75b 305 chr2R 8489424 8489444 chr2R 8496436 8496466 10 7011 23.0 27.0 25.0 0.4 7042 chr2R 8489424 intron mtt - chr2R 8492945 intron mtt - chr2R 8496466 intron mtt - chr2R_10_8490001 chr2R_8490001 RAL-808_75b 306 chr2R 8566029 8566066 chr2R 8566981 8567011 1360 13 941 6.0 3.0 4.5 2.4 982 chr2R 8566029 5` UTR Cyp6a14 - chr2R 8566520 5` UTR Cyp6a14 - chr2R 8567011 5` UTR Cyp6a14 - chr2R_13_8565001 chr2R_8565001 RAL-808_75b 307 chr2R 8722777 8722784 chr2R 8723010 8723017 pogo 4 233 3.0 7.5 5.2 0.6 240 chr2R 8722777 intron CG14767 - chr2R 8722897 intron CG14767 - chr2R 8723017 intron CG14767 - chr2R_4_8720001 chr2R_8720001 RAL-808_75b 308 chr2R 8748822 8748835 chr2R 8749108 8749136 4 294 4.0 6.5 5.2 0.6 314 chr2R 8748822 intron CG8740 + chr2R 8748979 intron CG8740 + chr2R 8749136 intron CG8740 + chr2R_4_8745001 chr2R_8745001 RAL-808_75b 309 chr2R 8789474 8789489 chr2R 8789555 8789562 4 83 1.0 6.0 3.5 0.9 88 chr2R 8789474 intergenic not near genes chr2R 8789518 intergenic not near genes chr2R 8789562 intergenic not near genes chr2R_4_8785001 chr2R_8785001 RAL-808_75b 310 chr2R 8803409 8803419 chr2R 8803481 8803511 4 76 2.5 3.0 2.8 1.1 102 chr2R 8803409 intron sns + chr2R 8803460 intron sns + chr2R 8803511 intron sns + chr2R_4_8800001 chr2R_8800001 RAL-808_75b 311 chr2R 8811708 8811725 chr2R 8812355 8812364 5 644 5.5 1.5 3.5 1.1 656 chr2R 8811708 intron sns + chr2R 8812036 intron sns + chr2R 8812364 intron sns + chr2R_5_8810001 chr2R_8810001 RAL-808_75b 312 chr2R 9055689 9055717 chr2R 9055987 9055995 5 296 4.5 2.5 3.5 1.1 306 chr2R 9055689 intron CG13743 - chr2R 9055842 intron CG13743 - chr2R 9055995 intron CG13743 - chr2R_5_9055001 chr2R_9055001 RAL-808_75b 313 chr2R 9065937 9065946 chr2R 9065995 9066026 4 74 2.5 2.0 2.2 1.2 89 chr2R 9065937 intron ana + chr2R 9065982 intron ana + chr2R 9066026 intron ana + chr2R_4_9065001 chr2R_9065001 RAL-808_75b 314 chr2R 9212695 9212721 chr2R 9213177 9213201 roo 5 478 5.5 6.0 5.8 0.7 506 chr2R 9212695 intergenic CR45309 + chr2R 9212948 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-808_75b 315 chr2R 9429795 9429826 chr2R 9429900 9429931 8 103 3.0 4.5 3.8 1.7 136 chr2R 9429795 intron Pdk + chr2R 9429863 intron Pdk + chr2R 9429931 intron Pdk + chr2R_8_9425001 chr2R_9425001 RAL-808_75b 316 chr2R 9869971 9869996 chr2R 9870045 9870072 7 71 1.5 1.5 1.5 2.8 101 chr2R 9869971 intron cbx - chr2R 9870022 intron cbx - chr2R 9870072 intron cbx - chr2R_7_9870001 chr2R_9870001 RAL-808_75b 317 chr2R 9945441 9945467 chr2R 9945628 9945643 BS 7 184 3.0 2.0 2.5 2.0 202 chr2R 9945441 intron Mef2 - chr2R 9945542 intron Mef2 - chr2R 9945643 intron Mef2 - chr2R_7_9945001 chr2R_9945001 RAL-808_75b 318 chr2R 10005874 10005881 chr2R 10007025 10007029 1360 6 1158 5.5 6.0 5.8 0.9 1155 chr2R 10005874 intron Pka-R2 - chr2R 10006452 intron Pka-R2 - chr2R 10007029 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 RAL-808_75b 319 chr2R 10017649 10017680 chr2R 10017728 10017758 10 74 3.0 2.5 2.8 2.6 109 chr2R 10017649 intron Pka-R2 - chr2R 10017704 intron Pka-R2 - chr2R 10017758 intron Pka-R2 - chr2R_10_10015001 chr2R_10015001 RAL-808_75b 320 chr2R 10132210 10132220 chr2R 10132269 10132277 6 73 1.5 3.5 2.5 1.7 67 chr2R 10132210 intron gem + chr2R 10132244 intron gem + chr2R 10132277 intron gem + chr2R_6_10130001 chr2R_10130001 RAL-808_75b 321 chr2R 10313321 10313339 chr2R 10313402 10313431 4 88 1.0 2.0 1.5 1.6 110 chr2R 10313321 intergenic not near genes chr2R 10313376 intergenic not near genes chr2R 10313431 intergenic Ndg + chr2R_4_10310001 chr2R_10310001 RAL-808_75b 322 chr2R 10352677 10352705 chr2R 10352750 10352781 10 69 2.5 2.5 2.5 2.9 104 chr2R 10352677 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352729 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352781 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_10_10350001 chr2R_10350001 RAL-808_75b 323 chr2R 10454099 10454129 chr2R 10454174 10454191 7 72 3.5 7.5 5.5 1.1 92 chr2R 10454099 intron,intron Galphao +,Cyp49a1 - chr2R 10454145 intron,intron Galphao +,Cyp49a1 - chr2R 10454191 intron,intron Galphao +,Cyp49a1 - chr2R_7_10450001 chr2R_10450001 RAL-808_75b 324 chr2R 10585581 10585590 chr2R 10594148 10594157 Tirant 4 8573 0.0 4.0 2.0 1.3 8576 chr2R 10585581 intron psq + chr2R 10589869 intron psq + chr2R 10594157 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-808_75b 325 chr2R 10732217 10732244 chr2R 10732315 10732334 10 98 3.0 1.5 2.2 3.1 117 chr2R 10732217 intron CG7220 + chr2R 10732276 intron CG7220 + chr2R 10732334 intron CG7220 + chr2R_10_10730001 chr2R_10730001 RAL-808_75b 326 chr2R 10790173 10790176 chr2R 10790237 10790255 4 80 2.0 3.0 2.5 1.1 82 chr2R 10790173 intron CG33144 - chr2R 10790214 intron CG33144 - chr2R 10790255 intron CG33144 - chr2R_4_10790001 chr2R_10790001 RAL-808_75b 327 chr2R 10796726 10796737 chr2R 10796810 10796836 4 90 2.5 1.5 2.0 1.3 110 chr2R 10796726 intron CG33144 - chr2R 10796781 intron CG33144 - chr2R 10796836 intron CG33144 - chr2R_4_10795001 chr2R_10795001 RAL-808_75b 328 chr2R 10851185 10851216 chr2R 10851269 10851301 7 85 3.5 3.5 3.5 1.6 116 chr2R 10851185 intron CG30015 - chr2R 10851243 intron CG30015 - chr2R 10851301 intron CG30015 - chr2R_7_10850001 chr2R_10850001 RAL-808_75b 329 chr2R 10948041 10948062 chr2R 10955575 10955599 17.6 8 7536 1.5 3.5 2.5 2.3 7558 chr2R 10948041 intergenic not near genes chr2R 10951820 intergenic not near genes chr2R 10955599 intergenic not near genes chr2R_8_10950001 chr2R_10950001 RAL-808_75b 330 chr2R 10979658 10979684 chr2R 10980128 10980139 297 4 461 1.5 0.0 0.8 2.2 481 chr2R 10979658 intergenic not near genes chr2R 10979898 intergenic not near genes chr2R 10980139 intergenic not near genes chr2R_4_10975001 chr2R_10975001 RAL-808_75b 331 chr2R 11009813 11009844 chr2R 11018987 11019016 roo 10 9169 1.5 5.5 3.5 2.2 9203 chr2R 11009813 intron luna - chr2R 11014414 intron luna - chr2R 11019016 intron luna - chr2R_10_11010001 chr2R_11010001 RAL-808_75b 332 chr2R 11019881 11019907 chr2R 11024946 11024949 jockey 4 5056 2.5 4.5 3.5 0.9 5068 chr2R 11019881 intron luna - chr2R 11022415 intron luna - chr2R 11024949 intron luna - chr2R_4_11020001 chr2R_11020001 RAL-808_75b 333 chr2R 11049516 11049541 chr2R 11049594 11049615 4 78 4.0 5.0 4.5 0.7 99 chr2R 11049516 intron luna - chr2R 11049566 intron luna - chr2R 11049615 intron luna - chr2R_4_11045001 chr2R_11045001 RAL-808_75b 334 chr2R 11059630 11059662 chr2R 11059708 11059710 4 70 2.0 1.0 1.5 1.6 80 chr2R 11059630 intron luna - chr2R 11059670 intron luna - chr2R 11059710 intron luna - chr2R_4_11055001 chr2R_11055001 RAL-808_75b 335 chr2R 11207839 11207850 chr2R 11208011 11208021 BS 7 177 5.5 1.0 3.2 1.7 182 chr2R 11207839 intron shn + chr2R 11207930 intron shn + chr2R 11208021 intron shn + chr2R_7_11205001 chr2R_11205001 RAL-808_75b 336 chr2R 11274312 11274332 chr2R 11274504 11274520 7 195 2.0 2.5 2.2 2.2 208 chr2R 11274312 intron TpnC47D - chr2R 11274416 intron TpnC47D - chr2R 11274520 intron TpnC47D - chr2R_7_11270001 chr2R_11270001 RAL-808_75b 337 chr2R 11292971 11292998 chr2R 11293047 11293057 6 70 6.5 0.0 3.2 1.4 86 chr2R 11292971 exon,3` UTR dare -,CG30033 + chr2R 11293014 exon,3` UTR dare -,CG30033 + chr2R 11293057 5` UTR,3` UTR dare -,CG30033 + chr2R_6_11290001 chr2R_11290001 RAL-808_75b 338 chr2R 11297620 11297651 chr2R 11301941 11301944 flea 5 4314 5.0 4.5 4.8 0.9 4324 chr2R 11297620 intergenic CG42336 - chr2R 11299782 intergenic not near genes chr2R 11301944 5` UTR CG7741 + chr2R_5_11295001 chr2R_11295001 RAL-808_75b 339 chr2R 11344145 11344180 chr2R 11344241 11344272 4 95 0.0 2.5 1.2 1.8 127 chr2R 11344145 intergenic alphaTry - chr2R 11344208 intergenic alphaTry - chr2R 11344272 3` UTR alphaTry - chr2R_4_11340001 chr2R_11340001 RAL-808_75b 340 chr2R 11415520 11415549 chr2R 11418669 11418683 opus 5 3140 2.0 2.0 2.0 1.7 3163 chr2R 11415520 intron Drip - chr2R 11417102 intron Drip - chr2R 11418683 intron Drip - chr2R_5_11415001 chr2R_11415001 RAL-808_75b 341 chr2R 11472649 11472675 chr2R 11473845 11473846 pogo 5 1186 6.5 2.0 4.2 1.0 1197 chr2R 11472649 intergenic not near genes chr2R 11473248 intergenic not near genes chr2R 11473846 intergenic not near genes chr2R_5_11470001 chr2R_11470001 RAL-808_75b 342 chr2R 11494622 11494634 chr2R 11494686 11494702 5 74 3.0 4.0 3.5 1.1 80 chr2R 11494622 intron inv + chr2R 11494662 intron inv + chr2R 11494702 intron inv + chr2R_5_11490001 chr2R_11490001 RAL-808_75b 343 chr2R 11909648 11909673 chr2R 11909777 11909800 5 127 28.0 22.0 25.0 0.2 152 chr2R 11909648 intron CG13183 - chr2R 11909724 intron CG13183 - chr2R 11909800 intron CG13183 - chr2R_5_11905001 chr2R_11905001 RAL-808_75b 344 chr2R 8518779 8518801 chr2R 12066178 12066196 4 3547398 10.0 11.0 10.5 0.3 3547417 chr2R 8518779 intron mtt - chr2R 10292488 intron CAP + chr2R 12066196 intron CG8888 - chr2R_4_10290001 chr2R_10290001 RAL-808_75b 345 chr2R 12103277 12103295 chr2R 12103529 12103547 9 257 5.0 2.5 3.8 1.9 270 chr2R 12103277 intron jeb - chr2R 12103412 intron jeb - chr2R 12103547 intron jeb - chr2R_9_12100001 chr2R_12100001 RAL-808_75b 346 chr2R 12104683 12104701 chr2R 12104758 12104775 4 77 8.0 4.0 6.0 0.6 92 chr2R 12104683 intron jeb - chr2R 12104729 intron jeb - chr2R 12104775 intron jeb - chr2R_4_12100001 chr2R_12100001 RAL-808_75b 347 chr2R 12186009 12186036 chr2R 12186104 12186131 4 90 0.5 6.0 3.2 1.0 122 chr2R 12186009 intron Cyp6g1 + chr2R 12186070 intron Cyp6g1 + chr2R 12186131 intron Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-808_75b 348 chr2R 12187471 12187508 chr2R 12190087 12190124 30 2626 83.0 71.5 77.2 0.4 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_30_12185001 chr2R_12185001 RAL-808_75b 349 chr2R 12217585 12217602 chr2R 12217656 12217683 5 78 2.0 3.0 2.5 1.4 98 chr2R 12217585 intergenic not near genes chr2R 12217634 intergenic not near genes chr2R 12217683 intergenic not near genes chr2R_5_12215001 chr2R_12215001 RAL-808_75b 350 chr2R 12363379 12363410 chr2R 12363811 12363842 9 431 4.0 2.0 3.0 2.2 463 chr2R 12363379 intergenic CG30043 + chr2R 12363610 intergenic CG30043 + chr2R 12363842 intergenic not near genes chr2R_9_12360001 chr2R_12360001 RAL-808_75b 351 chr2R 12501719 12501727 chr2R 12503867 12503889 Rt1c 4 2155 0.5 8.5 4.5 0.7 2170 chr2R 12501719 intron fdl - chr2R 12502804 intron fdl - chr2R 12503889 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-808_75b 352 chr2R 12540480 12540497 chr2R 12540558 12540558 4 76 3.5 0.0 1.8 1.4 78 chr2R 12540480 intron fra + chr2R 12540519 intron fra + chr2R 12540558 intron fra + chr2R_4_12540001 chr2R_12540001 RAL-808_75b 353 chr2R 12627488 12627508 chr2R 12627574 12627601 4 88 0.5 4.0 2.2 1.2 113 chr2R 12627488 intron CG17760 + chr2R 12627544 intron CG17760 + chr2R 12627601 exon CG17760 + chr2R_4_12625001 chr2R_12625001 RAL-808_75b 354 chr2R 12643811 12643818 chr2R 12643865 12643895 4 71 2.0 1.5 1.8 1.4 84 chr2R 12643811 intron CG8785 - chr2R 12643853 intron CG8785 - chr2R 12643895 exon CG8785 - chr2R_4_12640001 chr2R_12640001 RAL-808_75b 355 chr2R 12663336 12663372 chr2R 12663416 12663431 9 73 4.5 2.5 3.5 2.0 95 chr2R 12663336 intron nemy - chr2R 12663384 intron nemy - chr2R 12663431 intron nemy - chr2R_9_12660001 chr2R_12660001 RAL-808_75b 356 chr2R 12706420 12706441 chr2R 12706512 12706532 7 90 5.0 2.0 3.5 1.6 112 chr2R 12706420 intron CG42663 + chr2R 12706476 intron CG42663 + chr2R 12706532 intron CG42663 + chr2R_7_12705001 chr2R_12705001 RAL-808_75b 357 chr2R 12789296 12789326 chr2R 12797659 12797662 roo 5 8354 2.0 6.0 4.0 1.0 8366 chr2R 12789296 intron,3` UTR sca +,CR45137 - chr2R 12793479 intron,intron sca +,CR45137 - chr2R 12797662 intron,3` UTR sca +,CR45137 - chr2R_5_12790001 chr2R_12790001 RAL-808_75b 358 chr2R 12808316 12808348 chr2R 12808411 12808443 13 91 4.0 2.5 3.2 3.1 127 chr2R 12808316 intergenic not near genes chr2R 12808380 intergenic not near genes chr2R 12808443 intergenic not near genes chr2R_13_12805001 chr2R_12805001 RAL-808_75b 359 chr2R 12884726 12884742 chr2R 12884813 12884829 4 87 1.0 3.5 2.2 1.2 103 chr2R 12884726 5` UTR vg + chr2R 12884778 5` UTR vg + chr2R 12884829 5` UTR vg + chr2R_4_12880001 chr2R_12880001 RAL-808_75b 360 chr2R 13089757 13089784 chr2R 13089861 13089887 7 105 0.5 5.5 3.0 1.8 130 chr2R 13089757 intergenic not near genes chr2R 13089822 intergenic not near genes chr2R 13089887 intergenic not near genes chr2R_7_13085001 chr2R_13085001 RAL-808_75b 361 chr2R 13136838 13136853 chr2R 13141636 13141645 Doc 4 4796 8.0 4.0 6.0 0.6 4807 chr2R 13136838 exon Cap-G + chr2R 13139242 intron Cap-G + chr2R 13141645 intron Cap-G + chr2R_4_13135001 chr2R_13135001 RAL-808_75b 362 chr2R 13167417 13167431 chr2R 13167494 13167513 5 79 2.0 1.0 1.5 2.0 96 chr2R 13167417 intron GLaz - chr2R 13167465 intron GLaz - chr2R 13167513 intron GLaz - chr2R_5_13165001 chr2R_13165001 RAL-808_75b 363 chr2R 13309674 13309680 chr2R 13309784 13309797 4 114 3.0 0.5 1.8 1.4 123 chr2R 13309674 intergenic not near genes chr2R 13309736 intergenic not near genes chr2R 13309797 intergenic not near genes chr2R_4_13305001 chr2R_13305001 RAL-808_75b 364 chr2R 13431488 13431519 chr2R 13431567 13431574 5 74 4.0 1.5 2.8 1.3 86 chr2R 13431488 intron CG42321 - chr2R 13431531 intron CG42321 - chr2R 13431574 intron CG42321 - chr2R_5_13430001 chr2R_13430001 RAL-808_75b 365 chr2R 13566260 13566287 chr2R 13566340 13566367 10 75 3.5 1.5 2.5 2.9 107 chr2R 13566260 intergenic not near genes chr2R 13566314 intergenic not near genes chr2R 13566367 intergenic not near genes chr2R_10_13565001 chr2R_13565001 RAL-808_75b 366 chr2R 13577450 13577467 chr2R 13577509 13577527 6 64 0.5 1.5 1.0 3.0 77 chr2R 13577450 5` UTR CR44365 + chr2R 13577488 5` UTR CR44365 + chr2R 13577527 5` UTR CR44365 + chr2R_6_13575001 chr2R_13575001 RAL-808_75b 367 chr2R 13580519 13580531 chr2R 13580849 13580861 jockey 4 335 2.0 2.5 2.2 1.2 342 chr2R 13580519 3` UTR CG6191 - chr2R 13580690 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580861 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 RAL-808_75b 368 chr2R 13663607 13663618 chr2R 13663684 13663689 5 76 9.0 1.5 5.2 0.8 82 chr2R 13663607 intron fas + chr2R 13663648 intron fas + chr2R 13663689 intron fas + chr2R_5_13660001 chr2R_13660001 RAL-808_75b 369 chr2R 13663622 13663639 chr2R 13663683 13663694 4 64 3.0 1.5 2.2 1.2 72 chr2R 13663622 intron fas + chr2R 13663658 intron fas + chr2R 13663694 intron fas + chr2R_4_13660001 chr2R_13660001 RAL-808_75b 370 chr2R 13721209 13721228 chr2R 13721286 13721296 4 78 3.5 4.5 4.0 0.8 87 chr2R 13721209 intron fas + chr2R 13721252 intron fas + chr2R 13721296 intron fas + chr2R_4_13720001 chr2R_13720001 RAL-808_75b 371 chr2R 13749507 13749528 chr2R 13749596 13749617 4 86 4.0 1.0 2.5 1.1 110 chr2R 13749507 intergenic fas + chr2R 13749562 intergenic fas + chr2R 13749617 intergenic fas + chr2R_4_13745001 chr2R_13745001 RAL-808_75b 372 chr2R 13768999 13769006 chr2R 13769080 13769082 5 85 3.5 4.5 4.0 1.0 83 chr2R 13768999 intergenic not near genes chr2R 13769040 intergenic not near genes chr2R 13769082 intergenic not near genes chr2R_5_13765001 chr2R_13765001 RAL-808_75b 373 chr2R 13925868 13925886 chr2R 13926022 13926040 4 154 2.5 2.5 2.5 1.1 172 chr2R 13925868 intron shot - chr2R 13925954 intron shot - chr2R 13926040 intron shot - chr2R_4_13925001 chr2R_13925001 RAL-808_75b 374 chr2R 13942069 13942105 chr2R 13945279 13945285 6 3186 28.0 19.5 23.8 0.2 3216 chr2R 13942069 5` UTR shot - chr2R 13943677 3` UTR AGO1 - chr2R 13945285 3` UTR AGO1 - chr2R_6_13940001 chr2R_13940001 RAL-808_75b 375 chr2R 14246086 14246107 chr2R 14246164 14246175 4 80 6.0 2.5 4.2 0.8 89 chr2R 14246086 intergenic CG8503 + chr2R 14246130 intergenic CG8503 + chr2R 14246175 intergenic CG8503 + chr2R_4_14245001 chr2R_14245001 RAL-808_75b 376 chr2R 14308815 14308842 chr2R 14308900 14308916 8 85 3.0 2.5 2.8 2.1 101 chr2R 14308815 intron Shroom + chr2R 14308866 intron Shroom + chr2R 14308916 intron Shroom + chr2R_8_14305001 chr2R_14305001 RAL-808_75b 377 chr2R 14393879 14393899 chr2R 14393949 14393970 7 79 3.5 3.0 3.2 1.7 91 chr2R 14393879 intergenic not near genes chr2R 14393924 intergenic not near genes chr2R 14393970 intergenic not near genes chr2R_7_14390001 chr2R_14390001 RAL-808_75b 378 chr2R 14467314 14467316 chr2R 14476467 14476471 roo 4 9156 2.5 5.5 4.0 0.8 9157 chr2R 14467314 intergenic not near genes chr2R 14471892 intergenic not near genes chr2R 14476471 5` UTR CR44462 + chr2R_4_14470001 chr2R_14470001 RAL-808_75b 379 chr2R 14497391 14497406 chr2R 14498554 14498572 1360 4 1163 2.0 3.0 2.5 1.1 1181 chr2R 14497391 3` UTR Cpsf160 - chr2R 14497982 intron Cpsf160 - chr2R 14498572 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 RAL-808_75b 380 chr2R 14566444 14566478 chr2R 14566531 14566565 9 82 3.0 0.5 1.8 3.2 121 chr2R 14566444 intron ttv + chr2R 14566504 intron ttv + chr2R 14566565 intron ttv + chr2R_9_14565001 chr2R_14565001 RAL-808_75b 381 chr2R 14922153 14922173 chr2R 14922229 14922248 6 74 4.0 5.0 4.5 1.1 95 chr2R 14922153 intron CG10249 - chr2R 14922200 intron CG10249 - chr2R 14922248 intron CG10249 - chr2R_6_14920001 chr2R_14920001 RAL-808_75b 382 chr2R 15004737 15004755 chr2R 15005066 15005084 jockey 6 328 4.0 1.0 2.5 1.7 347 chr2R 15004737 intergenic not near genes chr2R 15004910 intergenic not near genes chr2R 15005084 intergenic not near genes chr2R_6_15000001 chr2R_15000001 RAL-808_75b 383 chr2R 15084983 15085005 chr2R 15092032 15092034 297 4 7039 4.0 3.0 3.5 0.9 7051 chr2R 15084983 intergenic not near genes chr2R 15088508 intergenic not near genes chr2R 15092034 5` UTR CR44457 + chr2R_4_15085001 chr2R_15085001 RAL-808_75b 384 chr2R 15119317 15119347 chr2R 15127797 15127816 Tirant 6 8471 4.5 4.5 4.5 1.1 8499 chr2R 15119317 intron chn + chr2R 15123566 intron chn + chr2R 15127816 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-808_75b 385 chr2R 15137979 15137998 chr2R 15138052 15138080 4 77 2.5 0.0 1.2 1.8 101 chr2R 15137979 intron chn + chr2R 15138030 intron chn + chr2R 15138080 intron chn + chr2R_4_15135001 chr2R_15135001 RAL-808_75b 386 chr2R 15330224 15330241 chr2R 15330358 15330369 4 130 1.5 3.0 2.2 1.2 145 chr2R 15330224 intergenic CR44371 - chr2R 15330296 intergenic CR44371 - chr2R 15330369 intergenic CR44371 - chr2R_4_15330001 chr2R_15330001 RAL-808_75b 387 chr2R 15460050 15460079 chr2R 15460126 15460148 7 73 2.5 3.5 3.0 1.8 98 chr2R 15460050 intron CG43729 + chr2R 15460099 intron CG43729 + chr2R 15460148 intron CG43729 + chr2R_7_15460001 chr2R_15460001 RAL-808_75b 388 chr2R 15756824 15756839 chr2R 15756895 15756930 5 83 3.0 4.0 3.5 1.1 106 chr2R 15756824 intron CG30089 + chr2R 15756877 intron CG30089 + chr2R 15756930 intron CG30089 + chr2R_5_15755001 chr2R_15755001 RAL-808_75b 389 chr2R 15810051 15810075 chr2R 15810325 15810349 4 269 0.5 3.5 2.0 1.3 298 chr2R 15810051 intron,intron Zasp52 -,tun + chr2R 15810200 intron,intron Zasp52 -,tun + chr2R 15810349 intron,intron Zasp52 -,tun + chr2R_4_15810001 chr2R_15810001 RAL-808_75b 390 chr2R 15847614 15847629 chr2R 15847682 15847701 6 70 4.0 4.5 4.2 1.2 87 chr2R 15847614 intron tun + chr2R 15847658 intron tun + chr2R 15847701 intron tun + chr2R_6_15845001 chr2R_15845001 RAL-808_75b 391 chr2R 16357870 16357882 chr2R 16357928 16357935 8 60 6.0 3.0 4.5 1.5 65 chr2R 16357870 5` UTR CR43416 + chr2R 16357902 5` UTR CR43416 + chr2R 16357935 5` UTR CR43416 + chr2R_8_16355001 chr2R_16355001 RAL-808_75b 392 chr2R 16503872 16503899 chr2R 16503961 16503977 6 85 2.0 3.0 2.5 1.7 105 chr2R 16503872 intron Sema-2a + chr2R 16503924 intron Sema-2a + chr2R 16503977 intron Sema-2a + chr2R_6_16500001 chr2R_16500001 RAL-808_75b 393 chr2R 16539636 16539666 chr2R 16544845 16544861 copia 4 5202 0.5 0.5 0.5 2.7 5225 chr2R 16539636 intergenic not near genes chr2R 16542248 intergenic not near genes chr2R 16544861 intergenic not near genes chr2R_4_16540001 chr2R_16540001 RAL-808_75b 394 chr2R 16617058 16617086 chr2R 16617137 16617144 9 74 2.0 4.5 3.2 2.1 86 chr2R 16617058 intron CG5065 + chr2R 16617101 intron CG5065 + chr2R 16617144 intron CG5065 + chr2R_9_16615001 chr2R_16615001 RAL-808_75b 395 chr2R 16619973 16620000 chr2R 16620054 16620067 9 79 4.0 2.5 3.2 2.1 94 chr2R 16619973 intron CG5065 + chr2R 16620020 intron CG5065 + chr2R 16620067 intron CG5065 + chr2R_9_16620001 chr2R_16620001 RAL-808_75b 396 chr2R 16737150 16737163 chr2R 16737238 16737255 5 94 4.5 3.5 4.0 1.0 105 chr2R 16737150 3` UTR CG43104 - chr2R 16737202 3` UTR CG43104 - chr2R 16737255 exon CG43104 - chr2R_5_16735001 chr2R_16735001 RAL-808_75b 397 chr2R 17147250 17147262 chr2R 17152281 17152293 jockey 7 5030 4.0 4.5 4.2 1.3 5043 chr2R 17147250 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152293 intergenic not near genes chr2R_7_17145001 chr2R_17145001 RAL-808_75b 398 chr2R 17236518 17236541 chr2R 17241710 17241744 copia 9 5197 3.0 3.5 3.2 2.1 5226 chr2R 17236518 intron mbl + chr2R 17239131 intron mbl + chr2R 17241744 intron mbl + chr2R_9_17235001 chr2R_17235001 RAL-808_75b 399 chr2R 17389291 17389303 chr2R 17389359 17389387 9 80 2.0 3.5 2.8 2.4 96 chr2R 17389291 intergenic CR44344 - chr2R 17389339 intergenic CR44344 - chr2R 17389387 intergenic CR44344 - chr2R_9_17385001 chr2R_17385001 RAL-808_75b 400 chr2R 17399661 17399687 chr2R 17400073 17400100 5 412 4.0 2.5 3.2 1.2 439 chr2R 17399661 intron Sip1 + chr2R 17399880 intron Sip1 + chr2R 17400100 intron Sip1 + chr2R_5_17395001 chr2R_17395001 RAL-808_75b 401 chr2R 17459012 17459037 chr2R 17459097 17459122 8 84 2.0 2.5 2.2 2.5 110 chr2R 17459012 intron CG14478 + chr2R 17459067 intron CG14478 + chr2R 17459122 intron CG14478 + chr2R_8_17455001 chr2R_17455001 RAL-808_75b 402 chr2R 17470323 17470351 chr2R 17470400 17470431 4 74 1.0 0.0 0.5 2.7 108 chr2R 17470323 intron qkr54B + chr2R 17470377 intron qkr54B + chr2R 17470431 intron qkr54B + chr2R_4_17470001 chr2R_17470001 RAL-808_75b 403 chr2R 17629608 17629624 chr2R 17629686 17629703 7 77 4.5 3.5 4.0 1.4 95 chr2R 17629608 intron,intron CG10936 -,rhi - chr2R 17629656 intron,intron CG10936 -,rhi - chr2R 17629703 intron,intron CG10936 -,rhi - chr2R_7_17625001 chr2R_17625001 RAL-808_75b 404 chr2R 17784026 17784052 chr2R 17784266 17784293 pogo 10 238 4.0 2.0 3.0 2.5 267 chr2R 17784026 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784293 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-808_75b 405 chr2R 18142918 18142920 chr2R 18143063 18143095 4 158 14.5 11.0 12.8 0.3 177 chr2R 18142918 intron,5` UTR pAbp +,snoRNA:Psi18S-1347a + chr2R 18143006 intron,5` UTR pAbp +,snoRNA:Psi18S-1347b + chr2R 18143095 intron,5` UTR pAbp +,snoRNA:Psi18S-1347b + chr2R_4_18140001 chr2R_18140001 RAL-808_75b 406 chr2R 18183971 18183975 chr2R 18186799 18186803 4 2829 22.0 30.0 26.0 0.1 2832 chr2R 18183971 exon CG5721 - chr2R 18185387 exon CG33958 - chr2R 18186803 exon CG33958 - chr2R_4_18185001 chr2R_18185001 RAL-808_75b 407 chr2R 18183967 18183991 chr2R 18186813 18186819 4 2836 27.0 23.0 25.0 0.2 2852 chr2R 18183967 exon CG5721 - chr2R 18185393 exon CG33958 - chr2R 18186819 exon CG33958 - chr2R_4_18185001 chr2R_18185001 RAL-808_75b 408 chr2R 18308293 18308313 chr2R 18308391 18308419 9 102 3.0 2.0 2.5 2.6 126 chr2R 18308293 intron sbb - chr2R 18308356 intron sbb - chr2R 18308419 intron sbb - chr2R_9_18305001 chr2R_18305001 RAL-808_75b 409 chr2R 18383993 18384001 chr2R 18386669 18386677 6 2676 6.5 14.5 10.5 0.5 2684 chr2R 18383993 5` UTR IM1 + chr2R 18385335 exon CG15067 - chr2R 18386677 exon IM2 + chr2R_6_18385001 chr2R_18385001 RAL-808_75b 410 chr2R 18575814 18575831 chr2R 18581986 18581989 3S18 5 6175 1.0 3.5 2.2 1.6 6175 chr2R 18575814 intron GEFmeso - chr2R 18578902 intron GEFmeso - chr2R 18581989 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-808_75b 411 chr2R 18590891 18590901 chr2R 18600020 18600053 roo 4 9139 3.5 2.5 3.0 1.0 9162 chr2R 18590891 intron GEFmeso - chr2R 18595472 intron GEFmeso - chr2R 18600053 intron GEFmeso - chr2R_4_18595001 chr2R_18595001 RAL-808_75b 412 chr2R 18692910 18692921 chr2R 18692997 18693001 6 84 2.0 2.5 2.2 1.9 91 chr2R 18692910 intron Sik3 + chr2R 18692956 intron Sik3 + chr2R 18693001 intron Sik3 + chr2R_6_18690001 chr2R_18690001 RAL-808_75b 413 chr2R 18760285 18760320 chr2R 18760387 18760422 8 93 1.5 1.5 1.5 3.2 137 chr2R 18760285 intron Jabba - chr2R 18760354 intron Jabba - chr2R 18760422 intron Jabba - chr2R_8_18760001 chr2R_18760001 RAL-808_75b 414 chr2R 18764504 18764527 chr2R 18764640 18764673 11 141 2.0 3.0 2.5 3.1 169 chr2R 18764504 intron Mctp + chr2R 18764588 intron Mctp + chr2R 18764673 intron Mctp + chr2R_11_18760001 chr2R_18760001 RAL-808_75b 415 chr2R 18924023 18924039 chr2R 18924113 18924147 4 95 5.0 2.5 3.8 0.8 124 chr2R 18924023 intron sano + chr2R 18924085 intron sano + chr2R 18924147 intron sano + chr2R_4_18920001 chr2R_18920001 RAL-808_75b 416 chr2R 18964918 18964953 chr2R 18964994 18965015 7 68 2.5 1.0 1.8 2.5 97 chr2R 18964918 intergenic not near genes chr2R 18964966 intergenic not near genes chr2R 18965015 intergenic not near genes chr2R_7_18960001 chr2R_18960001 RAL-808_75b 417 chr2R 19096521 19096533 chr2R 19096660 19096670 6 143 3.0 3.5 3.2 1.4 149 chr2R 19096521 intron 5-HT1A + chr2R 19096596 intron 5-HT1A + chr2R 19096670 intron 5-HT1A + chr2R_6_19095001 chr2R_19095001 RAL-808_75b 418 chr2R 19150866 19150887 chr2R 19151007 19151016 4 139 3.5 0.5 2.0 1.3 150 chr2R 19150866 intron ena + chr2R 19150941 intron ena + chr2R 19151016 intron ena + chr2R_4_19150001 chr2R_19150001 RAL-808_75b 419 chr2R 19385119 19385129 chr2R 19385651 19385672 4 538 0.5 0.5 0.5 2.7 553 chr2R 19385119 intergenic CG10073 + chr2R 19385396 intergenic CG10073 + chr2R 19385672 intergenic CG10081 + chr2R_4_19385001 chr2R_19385001 RAL-808_75b 420 chr2R 19536478 19536491 chr2R 19536549 19536557 4 75 3.0 2.5 2.8 1.1 79 chr2R 19536478 intron sm - chr2R 19536518 intron sm - chr2R 19536557 intron sm - chr2R_4_19535001 chr2R_19535001 RAL-808_75b 421 chr2R 19536493 19536501 chr2R 19536548 19536583 4 75 1.0 2.5 1.8 1.4 90 chr2R 19536493 intron sm - chr2R 19536538 intron sm - chr2R 19536583 intron sm - chr2R_4_19535001 chr2R_19535001 RAL-808_75b 422 chr2R 19555602 19555610 chr2R 19555675 19555677 6 78 2.5 3.5 3.0 1.5 75 chr2R 19555602 intron sm - chr2R 19555640 intron sm - chr2R 19555677 intron sm - chr2R_6_19555001 chr2R_19555001 RAL-808_75b 423 chr2R 19588750 19588778 chr2R 19588827 19588839 4 74 1.0 2.0 1.5 1.6 89 chr2R 19588750 intron sm - chr2R 19588794 intron sm - chr2R 19588839 intron sm - chr2R_4_19585001 chr2R_19585001 RAL-808_75b 424 chr2R 19776602 19776625 chr2R 19779925 19779929 jockey 4 3315 4.0 4.0 4.0 0.8 3327 chr2R 19776602 intergenic not near genes chr2R 19778266 intergenic not near genes chr2R 19779929 intergenic not near genes chr2R_4_19775001 chr2R_19775001 RAL-808_75b 425 chr2R 19897105 19897125 chr2R 19897182 19897205 9 80 2.0 3.0 2.5 2.6 100 chr2R 19897105 intergenic CR44572 - chr2R 19897155 intergenic CR44572 - chr2R 19897205 intergenic CR44572 - chr2R_9_19895001 chr2R_19895001 RAL-808_75b 426 chr2R 19914846 19914876 chr2R 19922258 19922262 mdg1 7 7402 2.5 3.0 2.8 1.8 7416 chr2R 19914846 intergenic not near genes chr2R 19918554 intergenic not near genes chr2R 19922262 intergenic not near genes chr2R_7_19915001 chr2R_19915001 RAL-808_75b 427 chr2R 19957438 19957464 chr2R 19962630 19962658 copia 7 5195 2.5 3.0 2.8 1.8 5220 chr2R 19957438 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962658 intergenic not near genes chr2R_7_19960001 chr2R_19960001 RAL-808_75b 428 chr2R 20008181 20008206 chr2R 20008270 20008277 9 84 2.0 1.5 1.8 3.2 96 chr2R 20008181 intergenic not near genes chr2R 20008229 intergenic not near genes chr2R 20008277 intergenic not near genes chr2R_9_20005001 chr2R_20005001 RAL-808_75b 429 chr2R 20057024 20057041 chr2R 20057094 20057101 4 69 1.0 2.5 1.8 1.4 77 chr2R 20057024 intergenic not near genes chr2R 20057062 intergenic not near genes chr2R 20057101 intergenic not near genes chr2R_4_20055001 chr2R_20055001 RAL-808_75b 430 chr2R 20101869 20101895 chr2R 20101950 20101977 8 79 3.0 3.0 3.0 2.0 108 chr2R 20101869 intergenic not near genes chr2R 20101923 intergenic not near genes chr2R 20101977 intergenic not near genes chr2R_8_20100001 chr2R_20100001 RAL-808_75b 431 chr2R 20326761 20326793 chr2R 20326836 20326840 6 58 5.0 2.0 3.5 1.3 79 chr2R 20326761 5` UTR MED8 - chr2R 20326800 5` UTR MED8 - chr2R 20326840 intergenic MED8 -,CG8929 + chr2R_6_20325001 chr2R_20325001 RAL-808_75b 432 chr2R 20467836 20467863 chr2R 20467936 20467949 5 92 4.5 4.0 4.2 1.0 113 chr2R 20467836 intron CG12484 + chr2R 20467892 intron CG12484 + chr2R 20467949 intron CG12484 + chr2R_5_20465001 chr2R_20465001 RAL-808_75b 433 chr2R 20542000 20542017 chr2R 20542078 20542095 5 77 3.0 2.0 2.5 1.4 95 chr2R 20542000 intergenic not near genes chr2R 20542048 intergenic not near genes chr2R 20542095 intergenic not near genes chr2R_5_20540001 chr2R_20540001 RAL-808_75b 434 chr2R 20700049 20700077 chr2R 20700128 20700146 9 79 3.5 1.0 2.2 2.8 97 chr2R 20700049 intron dpr + chr2R 20700098 intron dpr + chr2R 20700146 intron dpr + chr2R_9_20700001 chr2R_20700001 RAL-808_75b 435 chr2R 20702688 20702703 chr2R 20702741 20702744 4 60 4.0 3.0 3.5 0.9 56 chr2R 20702688 intron dpr + chr2R 20702716 intron dpr + chr2R 20702744 intron dpr + chr2R_4_20700001 chr2R_20700001 RAL-808_75b 436 chr2R 20707389 20707403 chr2R 20707539 20707539 8 152 2.5 3.0 2.8 2.1 150 chr2R 20707389 intron dpr + chr2R 20707464 intron dpr + chr2R 20707539 intron dpr + chr2R_8_20705001 chr2R_20705001 RAL-808_75b 437 chr2R 20962919 20962936 chr2R 20963014 20963023 7 94 1.5 5.0 3.2 1.7 104 chr2R 20962919 intergenic not near genes chr2R 20962971 intergenic not near genes chr2R 20963023 intergenic not near genes chr2R_7_20960001 chr2R_20960001 RAL-808_75b 438 chr2R 21151137 21151146 chr2R 21153797 21153806 opus 4 2658 0.5 2.0 1.2 1.8 2669 chr2R 21151137 intron CG30389 - chr2R 21152472 intron CG30389 - chr2R 21153806 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-808_75b 439 chr2R 21200006 21200033 chr2R 21200088 21200107 5 75 2.0 2.0 2.0 1.7 101 chr2R 21200006 intergenic CG44245 +,Glycogenin + chr2R 21200056 intergenic CG44245 +,Glycogenin + chr2R 21200107 intergenic CG44245 +,Glycogenin + chr2R_5_21200001 chr2R_21200001 RAL-808_75b 440 chr2R 21370520 21370537 chr2R 21370626 21370639 5 104 5.5 1.5 3.5 1.1 119 chr2R 21370520 intron cv-2 - chr2R 21370580 intron cv-2 - chr2R 21370639 intron cv-2 - chr2R_5_21370001 chr2R_21370001 RAL-808_75b 441 chr2R 21734354 21734366 chr2R 21734470 21734476 5 118 2.0 1.5 1.8 1.8 122 chr2R 21734354 intergenic not near genes chr2R 21734415 intergenic not near genes chr2R 21734476 intergenic not near genes chr2R_5_21730001 chr2R_21730001 RAL-808_75b 442 chr2R 21753085 21753115 chr2R 21753570 21753580 roo 6 479 2.5 2.5 2.5 1.7 495 chr2R 21753085 intergenic not near genes chr2R 21753332 intergenic not near genes chr2R 21753580 intergenic not near genes chr2R_6_21750001 chr2R_21750001 RAL-808_75b 443 chr2R 21795096 21795113 chr2R 21795201 21795215 6 104 9.0 3.5 6.2 0.8 119 chr2R 21795096 intergenic not near genes chr2R 21795156 intergenic not near genes chr2R 21795215 intergenic not near genes chr2R_6_21795001 chr2R_21795001 RAL-808_75b 444 chr2R 21795121 21795128 chr2R 21795200 21795205 6 95 5.5 3.0 4.2 1.2 84 chr2R 21795121 intergenic not near genes chr2R 21795163 intergenic not near genes chr2R 21795205 intergenic not near genes chr2R_6_21795001 chr2R_21795001 RAL-808_75b 445 chr2R 21809523 21809553 chr2R 21817762 21817762 roo 13 8237 3.0 4.5 3.8 2.7 8239 chr2R 21809523 intergenic not near genes chr2R 21813642 intergenic not near genes chr2R 21817762 intergenic not near genes chr2R_13_21810001 chr2R_21810001 RAL-808_75b 446 chr2R 21841486 21841511 chr2R 21841565 21841585 11 79 1.0 3.5 2.2 3.4 99 chr2R 21841486 intergenic not near genes chr2R 21841536 intergenic not near genes chr2R 21841585 intergenic not near genes chr2R_11_21840001 chr2R_21840001 RAL-808_75b 447 chr2R 21906271 21906292 chr2R 21906372 21906393 9 100 2.5 4.0 3.2 2.1 122 chr2R 21906271 intron Fili + chr2R 21906332 intron Fili + chr2R 21906393 intron Fili + chr2R_9_21905001 chr2R_21905001 RAL-808_75b 448 chr2R 21956307 21956327 chr2R 21956376 21956398 5 71 3.0 2.5 2.8 1.3 91 chr2R 21956307 intergenic not near genes chr2R 21956352 intergenic not near genes chr2R 21956398 intergenic not near genes chr2R_5_21955001 chr2R_21955001 RAL-808_75b 449 chr2R 22072681 22072716 chr2R 22072766 22072785 12 80 2.5 4.0 3.2 2.9 104 chr2R 22072681 intron CG11474 - chr2R 22072733 intron CG11474 - chr2R 22072785 intron CG11474 - chr2R_12_22070001 chr2R_22070001 RAL-808_75b 450 chr2R 22118422 22118451 chr2R 22118500 22118501 4 71 2.0 4.0 3.0 1.0 79 chr2R 22118422 intron Vrp1 - chr2R 22118462 intron Vrp1 - chr2R 22118501 intron Vrp1 - chr2R_4_22115001 chr2R_22115001 RAL-808_75b 451 chr2R 22124305 22124331 chr2R 22124394 22124409 6 86 4.0 1.5 2.8 1.6 104 chr2R 22124305 3` UTR mei-S332 + chr2R 22124357 3` UTR mei-S332 + chr2R 22124409 intergenic mei-S332 +,GM130 - chr2R_6_22120001 chr2R_22120001 RAL-808_75b 452 chr2R 22148088 22148094 chr2R 22148158 22148193 6 90 3.0 1.5 2.2 1.9 105 chr2R 22148088 intron a + chr2R 22148140 intron a + chr2R 22148193 intron a + chr2R_6_22145001 chr2R_22145001 RAL-808_75b 453 chr2R 22185675 22185691 chr2R 22185773 22185784 4 97 2.5 0.0 1.2 1.8 109 chr2R 22185675 3` UTR MED16 + chr2R 22185730 3` UTR MED16 + chr2R 22185784 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-808_75b 454 chr2R 22189455 22189473 chr2R 22189574 22189594 5 121 4.0 4.5 4.2 1.0 139 chr2R 22189455 3` UTR Vps35 + chr2R 22189524 3` UTR Vps35 + chr2R 22189594 3` UTR Vps35 + chr2R_5_22185001 chr2R_22185001 RAL-808_75b 455 chr2R 22360391 22360408 chr2R 22360814 22360828 jockey 4 424 4.5 3.5 4.0 0.8 437 chr2R 22360391 intron Liprin-gamma - chr2R 22360610 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-808_75b 456 chr2R 22525760 22525785 chr2R 22529319 22529328 jockey 5 3556 3.0 2.0 2.5 1.4 3568 chr2R 22525760 intron px - chr2R 22527544 intron px - chr2R 22529328 intron px - chr2R_5_22525001 chr2R_22525001 RAL-808_75b 457 chr2R 22620840 22620859 chr2R 22620940 22620959 6 99 0.5 7.0 3.8 1.2 119 chr2R 22620840 5` UTR CG33143 + chr2R 22620900 5` UTR CG33143 + chr2R 22620959 5` UTR CG33143 + chr2R_6_22620001 chr2R_22620001 RAL-808_75b 458 chr2R 22774967 22774994 chr2R 22775386 22775413 jockey 8 415 3.0 3.0 3.0 2.0 446 chr2R 22774967 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775413 intron CG42260 - chr2R_8_22775001 chr2R_22775001 RAL-808_75b 459 chr2R 22907403 22907426 chr2R 22907496 22907499 6 86 2.5 5.5 4.0 1.2 96 chr2R 22907403 intron nahoda + chr2R 22907451 intron nahoda + chr2R 22907499 intron nahoda + chr2R_6_22905001 chr2R_22905001 RAL-808_75b 460 chr2R 23023482 23023494 chr2R 23023592 23023592 5 107 0.5 8.0 4.2 1.0 110 chr2R 23023482 intron,intron twi +,CG42741 - chr2R 23023537 intron,intron twi +,CG42741 - chr2R 23023592 intron,intron twi +,CG42741 - chr2R_5_23020001 chr2R_23020001 RAL-808_75b 461 chr2R 23228298 23228324 chr2R 23228402 23228408 12 99 2.5 2.5 2.5 3.4 110 chr2R 23228298 intergenic not near genes chr2R 23228353 intergenic not near genes chr2R 23228408 intergenic not near genes chr2R_12_23225001 chr2R_23225001 RAL-808_75b 462 chr2R 23356273 23356310 chr2R 23356362 23356399 9 80 2.5 4.0 3.2 2.1 126 chr2R 23356273 3` UTR Rpi + chr2R 23356336 3` UTR Rpi + chr2R 23356399 3` UTR,3` UTR Rpi +,CG3500 - chr2R_9_23355001 chr2R_23355001 RAL-808_75b 463 chr2R 23368835 23368843 chr2R 23368931 23368933 5 105 4.5 4.0 4.2 1.0 98 chr2R 23368835 exon Ice1 + chr2R 23368884 exon Ice1 + chr2R 23368933 exon Ice1 + chr2R_5_23365001 chr2R_23365001 RAL-808_75b 464 chr2R 23437230 23437246 chr2R 23437306 23437321 4 74 5.0 7.5 6.2 0.6 91 chr2R 23437230 intergenic not near genes chr2R 23437276 intergenic not near genes chr2R 23437321 intergenic not near genes chr2R_4_23435001 chr2R_23435001 RAL-808_75b 465 chr2R 23463406 23463418 chr2R 23463466 23463497 5 67 3.0 3.5 3.2 1.2 91 chr2R 23463406 intron CG43795 + chr2R 23463452 intron CG43795 + chr2R 23463497 intron CG43795 + chr2R_5_23460001 chr2R_23460001 RAL-808_75b 466 chr2R 23518201 23518210 chr2R 23518272 23518288 4 76 3.0 0.0 1.5 1.6 87 chr2R 23518201 intergenic not near genes chr2R 23518244 intergenic not near genes chr2R 23518288 intergenic not near genes chr2R_4_23515001 chr2R_23515001 RAL-808_75b 467 chr2R 23607035 23607193 chr2R 23607116 23607286 11 81 1.5 0.5 1.0 5.5 251 chr2R 23607035 intron CG17664 - chr2R 23607160 intron CG17664 - chr2R 23607286 intron CG17664 - chr2R_11_23605001 chr2R_23605001 RAL-808_75b 468 chr2R 23914331 23914332 chr2R 23921947 23921955 412 4 7621 2.0 5.5 3.8 0.8 7624 chr2R 23914331 exon kcc + chr2R 23918143 intron kcc + chr2R 23921955 intron kcc + chr2R_4_23915001 chr2R_23915001 RAL-808_75b 469 chr2R 23986346 23986546 chr2R 23986422 23986614 12 72 1.0 3.0 2.0 4.0 268 chr2R 23986346 exon Phm - chr2R 23986480 intron Phm - chr2R 23986614 intron,5` UTR Phm -,CG30178 + chr2R_12_23985001 chr2R_23985001 RAL-808_75b 470 chr2R 23987660 23987682 chr2R 23987739 23987761 8 77 3.0 5.0 4.0 1.6 101 chr2R 23987660 exon Phm - chr2R 23987710 intron Phm - chr2R 23987761 intron Phm - chr2R_8_23985001 chr2R_23985001 RAL-808_75b 471 chr2R 24031380 24031410 chr2R 24031464 24031478 9 80 1.0 5.5 3.2 2.1 98 chr2R 24031380 5` UTR CG30172 - chr2R 24031429 intergenic CG30172 -,Chi - chr2R 24031478 intergenic CG30172 -,Chi - chr2R_9_24030001 chr2R_24030001 RAL-808_75b 472 chr2R 24147068 24147086 chr2R 24154644 24154650 412 5 7571 6.5 4.5 5.5 0.8 7582 chr2R 24147068 intron Dat + chr2R 24150859 intron Dat + chr2R 24154650 intron Dat + chr2R_5_24150001 chr2R_24150001 RAL-808_75b 473 chr2R 24353426 24353460 chr2R 24361788 24361822 roo 10 8361 2.0 3.0 2.5 2.9 8396 chr2R 24353426 intron,intron bs +,CR44811 - chr2R 24357624 intron,intron bs +,CR44811 - chr2R 24361822 intron,intron bs +,CR44811 - chr2R_10_24355001 chr2R_24355001 RAL-808_75b 474 chr2R 24590113 24590128 chr2R 24590205 24590219 6 89 9.0 5.0 7.0 0.8 106 chr2R 24590113 intron pio + chr2R 24590166 intron pio + chr2R 24590219 intron pio + chr2R_6_24590001 chr2R_24590001 RAL-808_75b 475 chr2R 24590139 24590143 chr2R 24590202 24590224 4 82 5.5 4.5 5.0 0.7 85 chr2R 24590139 intron pio + chr2R 24590182 intron pio + chr2R 24590224 intron pio + chr2R_4_24590001 chr2R_24590001 RAL-808_75b 476 chr2R 24591532 24591542 chr2R 24591601 24591616 7 72 2.5 2.5 2.5 2.0 84 chr2R 24591532 intron pio + chr2R 24591574 intron pio + chr2R 24591616 intron pio + chr2R_7_24590001 chr2R_24590001 RAL-808_75b 477 chr2R 24727900 24727917 chr2R 24735402 24735405 mdg1 6 7500 1.5 3.5 2.5 1.7 7505 chr2R 24727900 intron Mid1 - chr2R 24731652 intron Mid1 - chr2R 24735405 intron Mid1 - chr2R_6_24730001 chr2R_24730001 RAL-808_75b 478 chr2R 24894635 24894649 chr2R 24895624 24895654 5 995 4.5 3.0 3.8 1.0 1019 chr2R 24894635 intron NaCP60E + chr2R 24895144 intron NaCP60E + chr2R 24895654 intron NaCP60E + chr2R_5_24895001 chr2R_24895001 RAL-808_75b 479 chr2R 24955381 24955385 chr2R 24955475 24955485 4 96 5.5 2.5 4.0 0.8 104 chr2R 24955381 3` UTR CG12851 + chr2R 24955433 3` UTR CG12851 + chr2R 24955485 3` UTR CG12851 + chr2R_4_24955001 chr2R_24955001 RAL-808_75b 480 chr2R 24955391 24955409 chr2R 24955471 24955489 12 83 1.5 1.5 1.5 4.8 98 chr2R 24955391 3` UTR CG12851 + chr2R 24955440 3` UTR CG12851 + chr2R 24955489 3` UTR CG12851 + chr2R_12_24955001 chr2R_24955001 RAL-808_75b 481 chr2R 25004896 25004911 chr2R 25004974 25004974 5 75 5.0 6.0 5.5 0.8 78 chr2R 25004896 intron zip - chr2R 25004935 intron zip - chr2R 25004974 intron zip - chr2R_5_25000001 chr2R_25000001 RAL-808_75b 482 chr2R 25004913 25004921 chr2R 25004966 25004969 6 64 3.0 4.5 3.8 1.2 56 chr2R 25004913 intron zip - chr2R 25004941 intron zip - chr2R 25004969 intron zip - chr2R_6_25000001 chr2R_25000001 RAL-808_75b 483 chr2R 25018356 25018368 chr2R 25018445 25018468 5 96 5.5 6.0 5.8 0.7 112 chr2R 25018356 intron uzip + chr2R 25018412 intron uzip + chr2R 25018468 intron uzip + chr2R_5_25015001 chr2R_25015001 RAL-808_75b 484 chr2R 25018370 25018376 chr2R 25018439 25018477 5 93 4.0 3.5 3.8 1.0 107 chr2R 25018370 intron uzip + chr2R 25018424 intron uzip + chr2R 25018477 intron uzip + chr2R_5_25015001 chr2R_25015001 RAL-808_75b 485 chr2R 25141655 25141682 chr2R 25159338 25159372 roo 4 17688 3.5 2.5 3.0 1.0 17717 chr2R 25141655 intergenic not near genes chr2R 25150514 intergenic not near genes chr2R 25159372 intergenic not near genes chr2R_4_25150001 chr2R_25150001 RAL-808_75b 486 chr3L 68989 69016 chr3L 69072 69094 5 77 1.0 4.0 2.5 1.4 105 chr3L 68989 3` UTR Lsp1gamma + chr3L 69042 intergenic Lsp1gamma +,CR44510 + chr3L 69094 intergenic CR44510 +,Lsp1gamma + chr3L_5_65001 chr3L_65001 RAL-808_75b 487 chr3L 309239 309249 chr3L 309297 309297 4 56 4.5 3.0 3.8 0.8 58 chr3L 309239 exon fwd - chr3L 309268 exon fwd - chr3L 309297 exon fwd - chr3L_4_305001 chr3L_305001 RAL-808_75b 488 chr3L 376139 376149 chr3L 376201 376228 4 74 1.5 1.5 1.5 1.6 89 chr3L 376139 intron trh - chr3L 376184 intron trh - chr3L 376228 intron trh - chr3L_4_375001 chr3L_375001 RAL-808_75b 489 chr3L 470937 470946 chr3L 471148 471173 7 221 3.0 5.0 4.0 1.4 236 chr3L 470937 intron klar - chr3L 471055 intron klar - chr3L 471173 intron klar - chr3L_7_470001 chr3L_470001 RAL-808_75b 490 chr3L 514278 514306 chr3L 514355 514381 8 74 2.0 6.5 4.2 1.5 103 chr3L 514278 intron klar - chr3L 514330 intron klar - chr3L 514381 intron klar - chr3L_8_510001 chr3L_510001 RAL-808_75b 491 chr3L 714761 714793 chr3L 714839 714869 6 71 1.0 3.5 2.2 1.9 108 chr3L 714761 intergenic CR45411 - chr3L 714815 intergenic CR45411 - chr3L 714869 intergenic CR45411 - chr3L_6_710001 chr3L_710001 RAL-808_75b 492 chr3L 759827 759849 chr3L 760006 760006 4 174 5.5 4.5 5.0 0.7 179 chr3L 759827 intergenic not near genes chr3L 759916 intergenic not near genes chr3L 760006 intergenic not near genes chr3L_4_755001 chr3L_755001 RAL-808_75b 493 chr3L 789917 789947 chr3L 790402 790432 roo 8 482 3.0 6.0 4.5 1.5 515 chr3L 789917 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790432 intergenic not near genes chr3L_8_790001 chr3L_790001 RAL-808_75b 494 chr3L 811978 811995 chr3L 812051 812079 5 73 3.5 5.0 4.2 1.0 101 chr3L 811978 intergenic not near genes chr3L 812028 intergenic not near genes chr3L 812079 intergenic not near genes chr3L_5_810001 chr3L_810001 RAL-808_75b 495 chr3L 875662 875691 chr3L 875749 875754 7 76 3.5 5.5 4.5 1.3 92 chr3L 875662 intron CG32479 + chr3L 875708 intron CG32479 + chr3L 875754 intron CG32479 + chr3L_7_875001 chr3L_875001 RAL-808_75b 496 chr3L 925176 925210 chr3L 932602 932636 mdg1 12 7422 2.0 4.0 3.0 3.0 7460 chr3L 925176 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932636 intron Glut1 + chr3L_12_925001 chr3L_925001 RAL-808_75b 497 chr3L 933913 933928 chr3L 934015 934031 4 103 4.5 1.5 3.0 1.0 118 chr3L 933913 intron Glut1 + chr3L 933972 intron Glut1 + chr3L 934031 intron Glut1 + chr3L_4_930001 chr3L_930001 RAL-808_75b 498 chr3L 939770 939807 chr3L 940891 940895 jockey 10 1117 3.0 3.0 3.0 2.5 1125 chr3L 939770 intron Glut1 + chr3L 940332 intron Glut1 + chr3L 940895 intron Glut1 + chr3L_10_940001 chr3L_940001 RAL-808_75b 499 chr3L 1031575 1031613 chr3L 1031651 1031656 10 60 1.5 1.5 1.5 4.0 81 chr3L 1031575 intron trio - chr3L 1031616 intron trio - chr3L 1031656 intron trio - chr3L_10_1030001 chr3L_1030001 RAL-808_75b 500 chr3L 1104001 1104011 chr3L 1104182 1104190 4 183 2.5 4.5 3.5 0.9 189 chr3L 1104001 intergenic not near genes chr3L 1104096 intergenic not near genes chr3L 1104190 intergenic not near genes chr3L_4_1100001 chr3L_1100001 RAL-808_75b 501 chr3L 1109646 1109659 chr3L 1109721 1109726 4 74 2.5 7.0 4.8 0.7 80 chr3L 1109646 intergenic not near genes chr3L 1109686 intergenic not near genes chr3L 1109726 intergenic not near genes chr3L_4_1105001 chr3L_1105001 RAL-808_75b 502 chr3L 1125175 1125195 chr3L 1125241 1125260 4 72 0.5 0.5 0.5 2.7 85 chr3L 1125175 intergenic not near genes chr3L 1125218 intergenic not near genes chr3L 1125260 intergenic not near genes chr3L_4_1125001 chr3L_1125001 RAL-808_75b 503 chr3L 1154143 1154163 chr3L 1163287 1163305 roo 6 9146 2.0 3.0 2.5 1.7 9162 chr3L 1154143 intron bab2 - chr3L 1158724 intron bab2 - chr3L 1163305 intron bab2 - chr3L_6_1155001 chr3L_1155001 RAL-808_75b 504 chr3L 1219595 1219624 chr3L 1227327 1227357 412 8 7728 3.5 4.5 4.0 1.6 7762 chr3L 1219595 intron mwh + chr3L 1223476 intron mwh + chr3L 1227357 intron mwh + chr3L_8_1220001 chr3L_1220001 RAL-808_75b 505 chr3L 1251828 1251838 chr3L 1251904 1251914 4 76 0.0 0.0 0.0 4.0 86 chr3L 1251828 intergenic CG9129 +,CG9130 +,CG9133 + chr3L 1251871 intergenic CG9129 +,CG9130 +,CG9133 + chr3L 1251914 intergenic CG9130 +,CG9133 +,CG9129 + chr3L_4_1250001 chr3L_1250001 RAL-808_75b 506 chr3L 1268154 1268177 chr3L 1268341 1268348 6 182 2.0 0.5 1.2 2.7 194 chr3L 1268154 intron CG9134 + chr3L 1268251 intron CG9134 + chr3L 1268348 intron CG9134 + chr3L_6_1265001 chr3L_1265001 RAL-808_75b 507 chr3L 1310984 1310997 chr3L 1315844 1315875 8 4865 27.0 27.5 27.2 0.3 4891 chr3L 1310984 exon CG2469 + chr3L 1313430 intergenic CG9186 -,CG9153 + chr3L 1315875 exon CG9153 + chr3L_8_1310001 chr3L_1310001 RAL-808_75b 508 chr3L 1321560 1321592 chr3L 1321759 1321792 5 191 1.5 1.0 1.2 2.3 232 chr3L 1321560 intron Myo61F + chr3L 1321676 intron Myo61F + chr3L 1321792 intron,3` UTR Myo61F +,CG9184 - chr3L_5_1320001 chr3L_1320001 RAL-808_75b 509 chr3L 1357142 1357152 chr3L 1357208 1357215 4 61 2.0 3.5 2.8 1.1 73 chr3L 1357142 intron Ptp61F - chr3L 1357178 intron Ptp61F - chr3L 1357215 intron Ptp61F - chr3L_4_1355001 chr3L_1355001 RAL-808_75b 510 chr3L 1463418 1463448 chr3L 1463496 1463521 5 68 4.5 5.5 5.0 0.8 103 chr3L 1463418 intron Ptp61F - chr3L 1463470 intron Ptp61F - chr3L 1463521 intron Ptp61F - chr3L_5_1460001 chr3L_1460001 RAL-808_75b 511 chr3L 1480993 1481029 chr3L 1481072 1481084 11 69 3.5 5.0 4.2 2.1 91 chr3L 1480993 intron stet - chr3L 1481038 intron stet - chr3L 1481084 intron stet - chr3L_11_1480001 chr3L_1480001 RAL-808_75b 512 chr3L 1505997 1506029 chr3L 1513593 1513617 17.6 4 7594 4.0 2.5 3.2 1.0 7620 chr3L 1505997 intron,intron Psa +,cue - chr3L 1509807 intron,intron Psa +,cue - chr3L 1513617 intron,intron Psa +,cue - chr3L_4_1505001 chr3L_1505001 RAL-808_75b 513 chr3L 1710694 1710709 chr3L 1710771 1710776 5 76 2.5 1.5 2.0 1.7 82 chr3L 1710694 intron CG7991 + chr3L 1710735 intron CG7991 + chr3L 1710776 intron CG7991 + chr3L_5_1710001 chr3L_1710001 RAL-808_75b 514 chr3L 1737916 1737937 chr3L 1738008 1738042 4 93 3.0 0.0 1.5 1.6 126 chr3L 1737916 5` UTR CG18173 - chr3L 1737979 5` UTR CG18173 - chr3L 1738042 5` UTR CG18173 - chr3L_4_1735001 chr3L_1735001 RAL-808_75b 515 chr3L 1878102 1878128 chr3L 1878175 1878184 10 67 2.5 4.0 3.2 2.4 82 chr3L 1878102 intron CG13937 - chr3L 1878143 intron CG13937 - chr3L 1878184 intron CG13937 - chr3L_10_1875001 chr3L_1875001 RAL-808_75b 516 chr3L 1923006 1923039 chr3L 1923096 1923129 5 88 3.0 5.5 4.2 1.0 123 chr3L 1923006 intron Dbx + chr3L 1923068 intron Dbx + chr3L 1923129 intron Dbx + chr3L_5_1920001 chr3L_1920001 RAL-808_75b 517 chr3L 1991143 1991152 chr3L 1991197 1991230 4 71 4.0 2.5 3.2 1.0 87 chr3L 1991143 intergenic not near genes chr3L 1991186 intergenic not near genes chr3L 1991230 intergenic not near genes chr3L_4_1990001 chr3L_1990001 RAL-808_75b 518 chr3L 2035265 2035294 chr3L 2035341 2035366 4 73 2.0 0.0 1.0 2.0 101 chr3L 2035265 intergenic not near genes chr3L 2035316 intergenic not near genes chr3L 2035366 intergenic not near genes chr3L_4_2035001 chr3L_2035001 RAL-808_75b 519 chr3L 2168775 2168806 chr3L 2168861 2168897 10 86 2.0 1.5 1.8 3.6 122 chr3L 2168775 exon CG15879 - chr3L 2168836 intron CG15879 - chr3L 2168897 intron CG15879 - chr3L_10_2165001 chr3L_2165001 RAL-808_75b 520 chr3L 2308002 2308029 chr3L 2308108 2308135 9 104 3.5 3.5 3.5 2.0 133 chr3L 2308002 intergenic not near genes chr3L 2308068 intergenic not near genes chr3L 2308135 intergenic not near genes chr3L_9_2305001 chr3L_2305001 RAL-808_75b 521 chr3L 2331584 2331614 chr3L 2331658 2331668 5 66 4.0 3.5 3.8 1.0 84 chr3L 2331584 intron MsR1 + chr3L 2331626 intron MsR1 + chr3L 2331668 intron MsR1 + chr3L_5_2330001 chr3L_2330001 RAL-808_75b 522 chr3L 2366093 2366122 chr3L 2366178 2366202 4 82 3.5 4.0 3.8 0.8 109 chr3L 2366093 intergenic not near genes chr3L 2366148 intergenic not near genes chr3L 2366202 intergenic not near genes chr3L_4_2365001 chr3L_2365001 RAL-808_75b 523 chr3L 2447504 2447531 chr3L 2456659 2456667 roo 8 9152 4.5 8.0 6.2 1.1 9163 chr3L 2447504 intron CG45186 + chr3L 2452086 intron CG45186 + chr3L 2456667 intron CG45186 + chr3L_8_2450001 chr3L_2450001 RAL-808_75b 524 chr3L 2561542 2561558 chr3L 2561604 2561623 4 68 2.0 3.0 2.5 1.1 81 chr3L 2561542 intron msn - chr3L 2561582 intron msn - chr3L 2561623 intron msn - chr3L_4_2560001 chr3L_2560001 RAL-808_75b 525 chr3L 2683946 2683976 chr3L 2684021 2684046 7 73 6.0 3.5 4.8 1.2 100 chr3L 2683946 intron Fife - chr3L 2683996 intron Fife - chr3L 2684046 intron Fife - chr3L_7_2680001 chr3L_2680001 RAL-808_75b 526 chr3L 2719537 2719558 chr3L 2719639 2719658 5 97 2.0 2.5 2.2 1.6 121 chr3L 2719537 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719658 3` UTR Mrtf - chr3L_5_2715001 chr3L_2715001 RAL-808_75b 527 chr3L 2873595 2873602 chr3L 2873674 2873682 6 79 1.5 3.5 2.5 1.7 87 chr3L 2873595 intron CG43444 - chr3L 2873638 intron CG43444 - chr3L 2873682 intron CG43444 - chr3L_6_2870001 chr3L_2870001 RAL-808_75b 528 chr3L 2927841 2927858 chr3L 2936118 2936128 Tirant 5 8275 3.5 3.0 3.2 1.2 8287 chr3L 2927841 intron Shab + chr3L 2931984 intron Shab + chr3L 2936128 intron Shab + chr3L_5_2930001 chr3L_2930001 RAL-808_75b 529 chr3L 2987731 2987751 chr3L 2987992 2988010 4 258 3.0 5.5 4.2 0.8 279 chr3L 2987731 intergenic not near genes chr3L 2987870 intergenic not near genes chr3L 2988010 intergenic not near genes chr3L_4_2985001 chr3L_2985001 RAL-808_75b 530 chr3L 3040341 3040356 chr3L 3042129 3042145 S-element 4 1788 0.5 1.5 1.0 2.0 1804 chr3L 3040341 3` UTR CG2162 + chr3L 3041243 intergenic not near genes chr3L 3042145 intergenic Jafrac2 + chr3L_4_3040001 chr3L_3040001 RAL-808_75b 531 chr3L 3259623 3259641 chr3L 3259713 3259732 6 91 4.5 3.5 4.0 1.2 109 chr3L 3259623 intron ckd + chr3L 3259678 intron ckd + chr3L 3259732 intron ckd + chr3L_6_3255001 chr3L_3255001 RAL-808_75b 532 chr3L 3281471 3281474 chr3L 3281938 3281953 Doc 4 477 1.0 7.5 4.2 0.8 482 chr3L 3281471 intron CG12017 + chr3L 3281712 intron CG12017 + chr3L 3281953 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-808_75b 533 chr3L 3483548 3483568 chr3L 3483744 3483768 6 199 2.5 1.5 2.0 2.0 220 chr3L 3483548 intron CG42324 + chr3L 3483658 intron CG42324 + chr3L 3483768 intron CG42324 + chr3L_6_3480001 chr3L_3480001 RAL-808_75b 534 chr3L 3544408 3544416 chr3L 3544504 3544526 5 107 1.0 2.0 1.5 2.0 118 chr3L 3544408 intron Eip63E + chr3L 3544467 intron Eip63E + chr3L 3544526 intron Eip63E + chr3L_5_3540001 chr3L_3540001 RAL-808_75b 535 chr3L 3601302 3601324 chr3L 3606613 3606635 copia 12 5309 4.0 2.0 3.0 3.0 5333 chr3L 3601302 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606635 intron Eip63E + chr3L_12_3600001 chr3L_3600001 RAL-808_75b 536 chr3L 3719213 3719240 chr3L 3719299 3719321 4 88 1.5 0.0 0.8 2.2 108 chr3L 3719213 intron CG32264 - chr3L 3719267 intron CG32264 - chr3L 3719321 intron CG32264 - chr3L_4_3715001 chr3L_3715001 RAL-808_75b 537 chr3L 3795594 3795624 chr3L 3795671 3795673 4 70 3.0 2.5 2.8 1.1 79 chr3L 3795594 intron CG32264 - chr3L 3795634 intron CG32264 - chr3L 3795673 intron CG32264 - chr3L_4_3795001 chr3L_3795001 RAL-808_75b 538 chr3L 3890963 3890993 chr3L 3891044 3891057 8 74 1.0 1.0 1.0 4.0 94 chr3L 3890963 intergenic not near genes chr3L 3891010 intergenic not near genes chr3L 3891057 intergenic not near genes chr3L_8_3890001 chr3L_3890001 RAL-808_75b 539 chr3L 3915034 3915042 chr3L 3915111 3915119 4 77 1.5 3.5 2.5 1.1 85 chr3L 3915034 intron Eip63F-1 - chr3L 3915076 intron Eip63F-1 - chr3L 3915119 intron Eip63F-1 - chr3L_4_3915001 chr3L_3915001 RAL-808_75b 540 chr3L 3921394 3921416 chr3L 3921656 3921663 8 257 5.0 8.0 6.5 1.1 269 chr3L 3921394 intron Eip63F-1 - chr3L 3921528 intron Eip63F-1 - chr3L 3921663 intron Eip63F-1 - chr3L_8_3920001 chr3L_3920001 RAL-808_75b 541 chr3L 4342424 4342433 chr3L 4342487 4342487 4 66 7.0 3.0 5.0 0.7 63 chr3L 4342424 intron Cip4 - chr3L 4342456 intron Cip4 - chr3L 4342487 intron Cip4 - chr3L_4_4340001 chr3L_4340001 RAL-808_75b 542 chr3L 4382310 4382333 chr3L 4382412 4382413 8 98 3.5 2.5 3.0 2.0 103 chr3L 4382310 intergenic not near genes chr3L 4382362 intergenic not near genes chr3L 4382413 intergenic not near genes chr3L_8_4380001 chr3L_4380001 RAL-808_75b 543 chr3L 4713313 4713340 chr3L 4713389 4713389 4 69 5.5 0.0 2.8 1.1 76 chr3L 4713313 intron RhoGEF64C + chr3L 4713351 intron RhoGEF64C + chr3L 4713389 intron RhoGEF64C + chr3L_4_4710001 chr3L_4710001 RAL-808_75b 544 chr3L 4704731 4704750 chr3L 4717338 4717360 6 12610 23.5 20.5 22.0 0.3 12629 chr3L 4704731 intron RhoGEF64C + chr3L 4711046 intron RhoGEF64C + chr3L 4717360 intron RhoGEF64C + chr3L_6_4710001 chr3L_4710001 RAL-808_75b 545 chr3L 4748711 4748729 chr3L 4748802 4748809 5 88 5.5 6.0 5.8 0.7 98 chr3L 4748711 intron RhoGEF64C + chr3L 4748760 intron RhoGEF64C + chr3L 4748809 intron RhoGEF64C + chr3L_5_4745001 chr3L_4745001 RAL-808_75b 546 chr3L 4901140 4901153 chr3L 4907327 4907340 diver 4 6188 4.0 5.5 4.8 0.7 6200 chr3L 4901140 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907340 intergenic not near genes chr3L_4_4900001 chr3L_4900001 RAL-808_75b 547 chr3L 5104495 5104503 chr3L 5124626 5124637 5 20133 0.5 4.0 2.2 1.6 20142 chr3L 5104495 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124637 intergenic not near genes chr3L_5_5110001 chr3L_5110001 RAL-808_75b 548 chr3L 5133502 5133512 chr3L 5133771 5133781 4 269 4.0 2.5 3.2 1.0 279 chr3L 5133502 intergenic CG15213 -,CG4603 + chr3L 5133642 intergenic CG4603 +,CG15213 - chr3L 5133781 intergenic CG4603 + chr3L_4_5130001 chr3L_5130001 RAL-808_75b 549 chr3L 5388212 5388233 chr3L 5388524 5388537 5 312 4.0 0.5 2.2 1.6 325 chr3L 5388212 intergenic not near genes chr3L 5388374 intergenic not near genes chr3L 5388537 intergenic not near genes chr3L_5_5385001 chr3L_5385001 RAL-808_75b 550 chr3L 5537732 5537756 chr3L 5538070 5538094 jockey 7 337 2.0 3.5 2.8 1.8 362 chr3L 5537732 intergenic not near genes chr3L 5537913 intergenic CG10625 - chr3L 5538094 intergenic CG10625 - chr3L_7_5535001 chr3L_5535001 RAL-808_75b 551 chr3L 5926330 5926351 chr3L 5926503 5926516 BS 10 172 2.5 5.0 3.8 2.1 186 chr3L 5926330 intron Vap-33B + chr3L 5926423 intron Vap-33B + chr3L 5926516 intron Vap-33B + chr3L_10_5925001 chr3L_5925001 RAL-808_75b 552 chr3L 5983833 5983860 chr3L 5983953 5983953 6 109 6.5 0.0 3.2 1.4 120 chr3L 5983833 3` UTR CR45439 - chr3L 5983893 intergenic CR45439 -,CR45440 - chr3L 5983953 intergenic CR45439 -,CR45440 - chr3L_6_5980001 chr3L_5980001 RAL-808_75b 553 chr3L 5992594 5992617 chr3L 5992694 5992700 8 98 3.5 2.5 3.0 2.0 106 chr3L 5992594 intergenic not near genes chr3L 5992647 intergenic not near genes chr3L 5992700 intergenic not near genes chr3L_8_5990001 chr3L_5990001 RAL-808_75b 554 chr3L 6000754 6000755 chr3L 6001612 6001631 4 871 2.5 2.5 2.5 1.1 877 chr3L 6000754 intron PVRAP + chr3L 6001192 intron PVRAP + chr3L 6001631 intron PVRAP + chr3L_4_6000001 chr3L_6000001 RAL-808_75b 555 chr3L 6052648 6052673 chr3L 6052733 6052742 4 79 7.0 7.0 7.0 0.5 94 chr3L 6052648 exon Jon65Aii + chr3L 6052695 intron Jon65Aii + chr3L 6052742 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-808_75b 556 chr3L 6159867 6159891 chr3L 6159957 6159981 4 90 3.5 1.0 2.2 1.2 114 chr3L 6159867 intergenic not near genes chr3L 6159924 intergenic not near genes chr3L 6159981 intergenic not near genes chr3L_4_6155001 chr3L_6155001 RAL-808_75b 557 chr3L 6855931 6855955 chr3L 6860716 6860740 Doc 7 4781 1.5 1.0 1.2 3.2 4809 chr3L 6855931 intergenic not near genes chr3L 6858336 intergenic not near genes chr3L 6860740 intergenic not near genes chr3L_7_6855001 chr3L_6855001 RAL-808_75b 558 chr3L 6887540 6887550 chr3L 6895012 6895042 roo 5 7486 5.0 0.5 2.8 1.3 7502 chr3L 6887540 intergenic not near genes chr3L 6891291 intergenic not near genes chr3L 6895042 intergenic not near genes chr3L_5_6890001 chr3L_6890001 RAL-808_75b 559 chr3L 6974502 6974522 chr3L 6974598 6974609 6 98 0.5 8.0 4.2 1.2 107 chr3L 6974502 intron Galphai - chr3L 6974556 intron Galphai - chr3L 6974609 intron Galphai - chr3L_6_6970001 chr3L_6970001 RAL-808_75b 560 chr3L 7033186 7033196 chr3L 7033252 7033273 4 76 7.0 5.5 6.2 0.6 87 chr3L 7033186 intron Mp + chr3L 7033230 intron Mp + chr3L 7033273 intron Mp + chr3L_4_7030001 chr3L_7030001 RAL-808_75b 561 chr3L 7150880 7150894 chr3L 7150956 7150970 6 76 4.0 5.0 4.5 1.1 90 chr3L 7150880 intron corn - chr3L 7150925 intron corn - chr3L 7150970 intron corn - chr3L_6_7150001 chr3L_7150001 RAL-808_75b 562 chr3L 7488879 7488892 chr3L 7488960 7488971 5 80 0.5 1.5 1.0 2.5 92 chr3L 7488879 intergenic not near genes chr3L 7488925 intergenic not near genes chr3L 7488971 intergenic not near genes chr3L_5_7485001 chr3L_7485001 RAL-808_75b 563 chr3L 7591160 7591178 chr3L 7591235 7591266 6 77 0.5 2.0 1.2 2.7 106 chr3L 7591160 intergenic CG7716 - chr3L 7591213 intergenic CG7716 - chr3L 7591266 intergenic CG7716 - chr3L_6_7590001 chr3L_7590001 RAL-808_75b 564 chr3L 7695499 7695528 chr3L 7695579 7695610 8 78 1.0 4.0 2.5 2.3 111 chr3L 7695499 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L 7695554 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L 7695610 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L_8_7695001 chr3L_7695001 RAL-808_75b 565 chr3L 7715143 7715161 chr3L 7715291 7715297 5 146 3.5 3.0 3.2 1.2 154 chr3L 7715143 intron,intron CG32373 +,Ank2 - chr3L 7715220 intron,intron CG32373 +,Ank2 - chr3L 7715297 intron,intron CG32373 +,Ank2 - chr3L_5_7715001 chr3L_7715001 RAL-808_75b 566 chr3L 7793712 7793744 chr3L 7800763 7800768 297 5 7045 4.5 2.0 3.2 1.2 7056 chr3L 7793712 intron CG32369 - chr3L 7797240 intron CG32369 - chr3L 7800768 intron CG32369 - chr3L_5_7795001 chr3L_7795001 RAL-808_75b 567 chr3L 7883758 7883778 chr3L 7883903 7883928 7 145 2.0 0.5 1.2 3.2 170 chr3L 7883758 intron CG32365 + chr3L 7883843 intron CG32365 + chr3L 7883928 intron CG32365 + chr3L_7_7880001 chr3L_7880001 RAL-808_75b 568 chr3L 7886527 7886543 chr3L 7889032 7889061 Stalker4 5 2506 3.5 5.0 4.2 1.0 2534 chr3L 7886527 intron CG32365 + chr3L 7887794 intron CG32365 + chr3L 7889061 intron CG32365 + chr3L_5_7885001 chr3L_7885001 RAL-808_75b 569 chr3L 7886544 7886547 chr3L 7889030 7889065 Stalker4 4 2505 2.0 5.0 3.5 0.9 2521 chr3L 7886544 intron CG32365 + chr3L 7887804 intron CG32365 + chr3L 7889065 intron CG32365 + chr3L_4_7885001 chr3L_7885001 RAL-808_75b 570 chr3L 7985370 7985399 chr3L 7987696 7987699 NOF 6 2314 2.0 6.0 4.0 1.2 2329 chr3L 7985370 intron nmo + chr3L 7986534 intron nmo + chr3L 7987699 intron nmo + chr3L_6_7985001 chr3L_7985001 RAL-808_75b 571 chr3L 8295793 8295828 chr3L 8295949 8295986 8 155 3.5 3.5 3.5 1.8 193 chr3L 8295793 intergenic CG7201 - chr3L 8295890 intergenic not near genes chr3L 8295986 intergenic not near genes chr3L_8_8295001 chr3L_8295001 RAL-808_75b 572 chr3L 8481795 8481802 chr3L 8490930 8490939 roo 4 9137 4.5 3.0 3.8 0.8 9144 chr3L 8481795 intron CG43163 - chr3L 8486367 intron CG43163 - chr3L 8490939 intron CG43163 - chr3L_4_8485001 chr3L_8485001 RAL-808_75b 573 chr3L 8498303 8498330 chr3L 8505770 8505796 blood 6 7466 1.5 4.5 3.0 1.5 7493 chr3L 8498303 intron CG43163 - chr3L 8502050 intron CG43163 - chr3L 8505796 intron CG43163 - chr3L_6_8500001 chr3L_8500001 RAL-808_75b 574 chr3L 8551742 8551772 chr3L 8551825 8551855 10 78 2.0 2.5 2.2 3.1 113 chr3L 8551742 intron rhea + chr3L 8551798 intron rhea + chr3L 8551855 intron rhea + chr3L_10_8550001 chr3L_8550001 RAL-808_75b 575 chr3L 8644633 8644646 chr3L 8644702 8644705 7 69 3.5 2.5 3.0 1.8 72 chr3L 8644633 intergenic CG13305 - chr3L 8644669 intergenic CG13305 - chr3L 8644705 intergenic CG13305 - chr3L_7_8640001 chr3L_8640001 RAL-808_75b 576 chr3L 8690608 8690629 chr3L 8690851 8690856 9 242 6.0 5.0 5.5 1.4 248 chr3L 8690608 intergenic not near genes chr3L 8690732 intergenic not near genes chr3L 8690856 intergenic not near genes chr3L_9_8690001 chr3L_8690001 RAL-808_75b 577 chr3L 8832402 8832416 chr3L 8832495 8832509 6 92 10.5 0.5 5.5 0.9 107 chr3L 8832402 intron dally + chr3L 8832456 intron dally + chr3L 8832509 intron dally + chr3L_6_8830001 chr3L_8830001 RAL-808_75b 578 chr3L 8832422 8832431 chr3L 8832493 8832524 4 82 6.5 0.5 3.5 0.9 102 chr3L 8832422 intron dally + chr3L 8832473 intron dally + chr3L 8832524 intron dally + chr3L_4_8830001 chr3L_8830001 RAL-808_75b 579 chr3L 8849239 8849244 chr3L 8849303 8849307 4 72 2.0 1.0 1.5 1.6 68 chr3L 8849239 intron dally + chr3L 8849273 intron dally + chr3L 8849307 intron dally + chr3L_4_8845001 chr3L_8845001 RAL-808_75b 580 chr3L 9030427 9030453 chr3L 9030506 9030532 5 77 2.0 1.5 1.8 1.8 105 chr3L 9030427 intergenic not near genes chr3L 9030480 intergenic not near genes chr3L 9030532 intergenic not near genes chr3L_5_9030001 chr3L_9030001 RAL-808_75b 581 chr3L 9076932 9076951 chr3L 9084491 9084503 412 5 7557 7.0 6.0 6.5 0.7 7571 chr3L 9076932 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084503 exon Tequila + chr3L_5_9080001 chr3L_9080001 RAL-808_75b 582 chr3L 9164709 9164728 chr3L 9166165 9166195 hobo 6 1459 3.0 1.0 2.0 2.0 1486 chr3L 9164709 intron Rdl - chr3L 9165452 intron Rdl - chr3L 9166195 intron Rdl - chr3L_6_9165001 chr3L_9165001 RAL-808_75b 583 chr3L 9191883 9191907 chr3L 9191973 9191997 7 89 2.5 3.0 2.8 1.8 114 chr3L 9191883 intergenic not near genes chr3L 9191940 intergenic not near genes chr3L 9191997 intergenic not near genes chr3L_7_9190001 chr3L_9190001 RAL-808_75b 584 chr3L 9443519 9443539 chr3L 9445305 9445324 S-element 7 1783 3.5 3.5 3.5 1.6 1805 chr3L 9443519 intron CG33926 + chr3L 9444422 intron CG33926 + chr3L 9445324 intron CG33926 + chr3L_7_9440001 chr3L_9440001 RAL-808_75b 585 chr3L 9501718 9501727 chr3L 9502192 9502194 roo 5 479 2.0 4.5 3.2 1.2 476 chr3L 9501718 intron path - chr3L 9501956 intron path - chr3L 9502194 intron path - chr3L_5_9500001 chr3L_9500001 RAL-808_75b 586 chr3L 9571912 9571933 chr3L 9572255 9572281 jockey 5 347 3.5 0.0 1.8 1.8 369 chr3L 9571912 intron CG42673 + chr3L 9572096 intron CG42673 + chr3L 9572281 intron CG42673 + chr3L_5_9570001 chr3L_9570001 RAL-808_75b 587 chr3L 9575909 9575937 chr3L 9580985 9581013 jockey 9 5074 3.5 3.5 3.5 2.0 5104 chr3L 9575909 intron CG42673 + chr3L 9578461 intron CG42673 + chr3L 9581013 intron CG42673 + chr3L_9_9575001 chr3L_9575001 RAL-808_75b 588 chr3L 9675853 9675878 chr3L 9675928 9675948 6 77 1.0 5.5 3.2 1.4 95 chr3L 9675853 intron fry - chr3L 9675900 intron fry - chr3L 9675948 intron fry - chr3L_6_9675001 chr3L_9675001 RAL-808_75b 589 chr3L 9835481 9835508 chr3L 9835601 9835629 9 119 1.5 2.0 1.8 3.2 148 chr3L 9835481 intron I-2 - chr3L 9835555 intron I-2 - chr3L 9835629 intron I-2 - chr3L_9_9835001 chr3L_9835001 RAL-808_75b 590 chr3L 9979227 9979239 chr3L 9979525 9979550 4 308 3.5 4.0 3.8 0.8 323 chr3L 9979227 intron dpr6 + chr3L 9979388 intron dpr6 + chr3L 9979550 intron dpr6 + chr3L_4_9975001 chr3L_9975001 RAL-808_75b 591 chr3L 10049549 10049575 chr3L 10049624 10049655 6 79 1.0 3.0 2.0 2.0 106 chr3L 10049549 intron dpr6 + chr3L 10049602 intron dpr6 + chr3L 10049655 intron dpr6 + chr3L_6_10045001 chr3L_10045001 RAL-808_75b 592 chr3L 10127741 10127761 chr3L 10127818 10127826 6 71 5.5 1.0 3.2 1.4 85 chr3L 10127741 intron dpr6 + chr3L 10127784 intron dpr6 + chr3L 10127826 intron dpr6 + chr3L_6_10125001 chr3L_10125001 RAL-808_75b 593 chr3L 10127762 10127770 chr3L 10127814 10127834 7 61 4.5 1.5 3.0 1.8 72 chr3L 10127762 intron dpr6 + chr3L 10127798 intron dpr6 + chr3L 10127834 intron dpr6 + chr3L_7_10125001 chr3L_10125001 RAL-808_75b 594 chr3L 10219239 10219256 chr3L 10219336 10219351 5 97 4.5 4.5 4.5 0.9 112 chr3L 10219239 exon CG32055 - chr3L 10219295 exon CG32055 - chr3L 10219351 exon CG32055 - chr3L_5_10215001 chr3L_10215001 RAL-808_75b 595 chr3L 10248966 10249136 chr3L 10249044 10249193 5 69 0.0 0.0 0.0 5.0 227 chr3L 10248966 intergenic CR44540 - chr3L 10249080 intergenic CR44540 - chr3L 10249193 intergenic not near genes chr3L_5_10245001 chr3L_10245001 RAL-808_75b 596 chr3L 10308745 10308765 chr3L 10308822 10308840 6 76 5.0 2.5 3.8 1.2 95 chr3L 10308745 intergenic not near genes chr3L 10308792 intergenic not near genes chr3L 10308840 intergenic not near genes chr3L_6_10305001 chr3L_10305001 RAL-808_75b 597 chr3L 10397298 10397325 chr3L 10397377 10397389 4 75 3.0 1.5 2.2 1.2 91 chr3L 10397298 intergenic not near genes chr3L 10397344 intergenic not near genes chr3L 10397389 intergenic not near genes chr3L_4_10395001 chr3L_10395001 RAL-808_75b 598 chr3L 10414950 10414975 chr3L 10417315 10417329 Doc 4 2360 0.5 2.0 1.2 1.8 2379 chr3L 10414950 intergenic CG12362 + chr3L 10416140 intergenic not near genes chr3L 10417329 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-808_75b 599 chr3L 10417581 10417595 chr3L 10417648 10417671 5 72 5.0 2.0 3.5 1.1 90 chr3L 10417581 intergenic not near genes chr3L 10417626 intergenic not near genes chr3L 10417671 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-808_75b 600 chr3L 10417599 10417602 chr3L 10417645 10417663 5 61 4.0 1.0 2.5 1.4 64 chr3L 10417599 intergenic not near genes chr3L 10417631 intergenic not near genes chr3L 10417663 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-808_75b 601 chr3L 10485077 10485112 chr3L 10485239 10485274 9 160 3.5 3.0 3.2 2.1 197 chr3L 10485077 intron A2bp1 + chr3L 10485176 intron A2bp1 + chr3L 10485274 intron A2bp1 + chr3L_9_10485001 chr3L_10485001 RAL-808_75b 602 chr3L 10783686 10783714 chr3L 10783768 10783798 10 78 4.0 2.0 3.0 2.5 112 chr3L 10783686 intergenic not near genes chr3L 10783742 intergenic not near genes chr3L 10783798 intergenic not near genes chr3L_10_10780001 chr3L_10780001 RAL-808_75b 603 chr3L 11087067 11087088 chr3L 11088856 11088864 S-element 4 1786 1.5 6.5 4.0 0.8 1797 chr3L 11087067 intron JIL-1 - chr3L 11087966 intron JIL-1 - chr3L 11088864 intron JIL-1 - chr3L_4_11085001 chr3L_11085001 RAL-808_75b 604 chr3L 11105293 11105325 chr3L 11107004 11107025 X-element 8 1709 1.0 0.5 0.8 4.4 1732 chr3L 11105293 intergenic not near genes chr3L 11106159 intergenic not near genes chr3L 11107025 3` UTR CG32073 - chr3L_8_11105001 chr3L_11105001 RAL-808_75b 605 chr3L 11349017 11349036 chr3L 11349110 11349129 12 92 5.0 2.5 3.8 2.5 112 chr3L 11349017 intergenic CR45251 - chr3L 11349073 intergenic CR45251 - chr3L 11349129 intergenic CR45251 - chr3L_12_11345001 chr3L_11345001 RAL-808_75b 606 chr3L 11528234 11528259 chr3L 11528312 11528338 10 80 2.0 3.0 2.5 2.9 104 chr3L 11528234 intron Mob2 - chr3L 11528286 intron Mob2 - chr3L 11528338 intron Mob2 - chr3L_10_11525001 chr3L_11525001 RAL-808_75b 607 chr3L 11587922 11587946 chr3L 11587998 11588022 5 76 4.0 5.0 4.5 0.9 100 chr3L 11587922 intergenic rt - chr3L 11587972 intergenic rt - chr3L 11588022 intergenic rt - chr3L_5_11585001 chr3L_11585001 RAL-808_75b 608 chr3L 11723091 11723104 chr3L 11727886 11727899 Doc 6 4794 4.5 1.5 3.0 1.5 4808 chr3L 11723091 3` UTR Bmcp + chr3L 11725495 intron Bmcp + chr3L 11727899 3` UTR Bmcp + chr3L_6_11725001 chr3L_11725001 RAL-808_75b 609 chr3L 12013932 12013936 chr3L 12014005 12014027 4 82 2.5 2.0 2.2 1.2 95 chr3L 12013932 intron rols - chr3L 12013980 intron rols - chr3L 12014027 intron rols - chr3L_4_12010001 chr3L_12010001 RAL-808_75b 610 chr3L 12197394 12197418 chr3L 12197476 12197500 4 80 2.0 4.5 3.2 1.0 106 chr3L 12197394 intergenic CG11529 + chr3L 12197447 intergenic CG11529 + chr3L 12197500 intergenic CG11529 + chr3L_4_12195001 chr3L_12195001 RAL-808_75b 611 chr3L 12231377 12231395 chr3L 12231676 12231694 5 301 27.5 27.0 27.2 0.2 317 chr3L 12231377 intron app - chr3L 12231536 intron app - chr3L 12231694 intron app - chr3L_5_12230001 chr3L_12230001 RAL-808_75b 612 chr3L 12231372 12231378 chr3L 12231695 12231704 5 312 23.0 25.0 24.0 0.2 332 chr3L 12231372 intron app - chr3L 12231538 intron app - chr3L 12231704 intron app - chr3L_5_12230001 chr3L_12230001 RAL-808_75b 613 chr3L 12283582 12283587 chr3L 12283636 12283663 4 65 0.0 4.0 2.0 1.3 81 chr3L 12283582 intergenic not near genes chr3L 12283622 intergenic not near genes chr3L 12283663 intergenic not near genes chr3L_4_12280001 chr3L_12280001 RAL-808_75b 614 chr3L 12489166 12489177 chr3L 12489242 12489246 4 77 0.5 0.5 0.5 2.7 80 chr3L 12489166 intron CG10660 - chr3L 12489206 intron CG10660 - chr3L 12489246 intron CG10660 - chr3L_4_12485001 chr3L_12485001 RAL-808_75b 615 chr3L 12615749 12615769 chr3L 12615816 12615842 5 68 3.5 5.0 4.2 1.0 93 chr3L 12615749 intron caup + chr3L 12615796 intron caup + chr3L 12615842 intron caup + chr3L_5_12615001 chr3L_12615001 RAL-808_75b 616 chr3L 12837384 12837411 chr3L 12837461 12837488 5 72 4.0 1.5 2.8 1.3 104 chr3L 12837384 intron CG10960 - chr3L 12837436 intron CG10960 - chr3L 12837488 intron CG10960 - chr3L_5_12835001 chr3L_12835001 RAL-808_75b 617 chr3L 12874932 12874954 chr3L 12877224 12877227 jockey 5 2287 2.0 3.5 2.8 1.3 2295 chr3L 12874932 intergenic not near genes chr3L 12876080 intergenic not near genes chr3L 12877227 intergenic not near genes chr3L_5_12875001 chr3L_12875001 RAL-808_75b 618 chr3L 12894804 12894822 chr3L 12894879 12894889 6 73 4.5 4.5 4.5 1.1 85 chr3L 12894804 intergenic CG14118 + chr3L 12894846 intergenic CG14118 + chr3L 12894889 intergenic CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-808_75b 619 chr3L 12919289 12919306 chr3L 12924748 12924753 Rt1c 5 5465 4.0 5.0 4.5 0.9 5464 chr3L 12919289 intergenic not near genes chr3L 12922021 intergenic not near genes chr3L 12924753 intergenic not near genes chr3L_5_12920001 chr3L_12920001 RAL-808_75b 620 chr3L 12957795 12957811 chr3L 12962275 12962293 copia 4 4480 3.5 3.5 3.5 0.9 4498 chr3L 12957795 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962293 intergenic not near genes chr3L_4_12960001 chr3L_12960001 RAL-808_75b 621 chr3L 12957813 12957818 chr3L 12962266 12962300 copia 6 4474 3.0 2.5 2.8 1.6 4487 chr3L 12957813 intergenic not near genes chr3L 12960056 intergenic not near genes chr3L 12962300 intergenic not near genes chr3L_6_12960001 chr3L_12960001 RAL-808_75b 622 chr3L 12966980 12966989 chr3L 12967609 12967617 5 629 3.0 7.0 5.0 0.8 637 chr3L 12966980 exon Or69a - chr3L 12967298 exon Or69a - chr3L 12967617 exon Or69a - chr3L_5_12965001 chr3L_12965001 RAL-808_75b 623 chr3L 12966990 12967009 chr3L 12967605 12967622 6 616 2.5 4.5 3.5 1.3 632 chr3L 12966990 exon Or69a - chr3L 12967306 exon Or69a - chr3L 12967622 exon Or69a - chr3L_6_12965001 chr3L_12965001 RAL-808_75b 624 chr3L 13007696 13007723 chr3L 13007775 13007802 5 75 0.5 3.0 1.8 1.8 106 chr3L 13007696 exon CG11263 + chr3L 13007749 3` UTR CG11263 + chr3L 13007802 3` UTR CG11263 + chr3L_5_13005001 chr3L_13005001 RAL-808_75b 625 chr3L 13010972 13010991 chr3L 13011085 13011094 5 118 2.5 3.5 3.0 1.2 122 chr3L 13010972 exon CG11261 - chr3L 13011033 exon CG11261 - chr3L 13011094 exon CG11261 - chr3L_5_13010001 chr3L_13010001 RAL-808_75b 626 chr3L 13161773 13161794 chr3L 13161848 13161861 7 74 2.5 0.5 1.5 2.8 88 chr3L 13161773 intergenic not near genes chr3L 13161817 intergenic not near genes chr3L 13161861 intergenic not near genes chr3L_7_13160001 chr3L_13160001 RAL-808_75b 627 chr3L 13218903 13218927 chr3L 13218987 13218995 7 76 4.0 3.5 3.8 1.5 92 chr3L 13218903 intergenic CR45098 - chr3L 13218949 intergenic CR45098 - chr3L 13218995 intergenic CR45098 - chr3L_7_13215001 chr3L_13215001 RAL-808_75b 628 chr3L 13254742 13254756 chr3L 13254855 13254865 5 114 5.5 4.0 4.8 0.9 123 chr3L 13254742 intron caps + chr3L 13254804 intron caps + chr3L 13254865 intron caps + chr3L_5_13250001 chr3L_13250001 RAL-808_75b 629 chr3L 13267291 13267316 chr3L 13267395 13267414 6 106 2.5 2.0 2.2 1.9 123 chr3L 13267291 intron caps + chr3L 13267352 intron caps + chr3L 13267414 intron caps + chr3L_6_13265001 chr3L_13265001 RAL-808_75b 630 chr3L 13296525 13296547 chr3L 13296615 13296633 4 89 3.0 4.0 3.5 0.9 108 chr3L 13296525 intergenic Sfp70A4 -,CR45253 + chr3L 13296579 3` UTR Sfp70A4 - chr3L 13296633 3` UTR Sfp70A4 - chr3L_4_13295001 chr3L_13295001 RAL-808_75b 631 chr3L 13525155 13525187 chr3L 13532950 13532973 roo 7 7791 5.5 2.5 4.0 1.4 7818 chr3L 13525155 intergenic not near genes chr3L 13529064 intergenic not near genes chr3L 13532973 intergenic not near genes chr3L_7_13525001 chr3L_13525001 RAL-808_75b 632 chr3L 13634851 13634858 chr3L 13634917 13634938 5 73 4.0 3.0 3.5 1.1 87 chr3L 13634851 intron bru-3 - chr3L 13634894 intron bru-3 - chr3L 13634938 intron bru-3 - chr3L_5_13630001 chr3L_13630001 RAL-808_75b 633 chr3L 13677540 13677562 chr3L 13677614 13677634 4 75 0.0 3.5 1.8 1.4 94 chr3L 13677540 intron bru-3 - chr3L 13677587 intron bru-3 - chr3L 13677634 intron bru-3 - chr3L_4_13675001 chr3L_13675001 RAL-808_75b 634 chr3L 13804555 13804578 chr3L 13822837 13822849 roo 5 18277 2.0 3.0 2.5 1.4 18294 chr3L 13804555 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822849 intergenic not near genes chr3L_5_13810001 chr3L_13810001 RAL-808_75b 635 chr3L 13975252 13975274 chr3L 13975337 13975339 4 82 1.0 1.5 1.2 1.8 87 chr3L 13975252 intron Hsc70-1 + chr3L 13975296 intron Hsc70-1 + chr3L 13975339 intron Hsc70-1 + chr3L_4_13975001 chr3L_13975001 RAL-808_75b 636 chr3L 14245575 14245593 chr3L 14245665 14245686 1360 6 90 2.5 2.5 2.5 1.7 111 chr3L 14245575 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245686 3` UTR CR44561 - chr3L_6_14245001 chr3L_14245001 RAL-808_75b 637 chr3L 14267389 14267394 chr3L 14271810 14271811 F-element 5 4425 6.0 1.0 3.5 1.1 4422 chr3L 14267389 intergenic not near genes chr3L 14269600 intergenic not near genes chr3L 14271811 intergenic not near genes chr3L_5_14265001 chr3L_14265001 RAL-808_75b 638 chr3L 14282604 14282607 chr3L 14282667 14282680 4 68 0.5 5.0 2.8 1.1 76 chr3L 14282604 intron fz + chr3L 14282642 intron fz + chr3L 14282680 intron fz + chr3L_4_14280001 chr3L_14280001 RAL-808_75b 639 chr3L 14295999 14296016 chr3L 14296472 14296491 roo 5 475 4.0 5.0 4.5 0.9 492 chr3L 14295999 intron fz + chr3L 14296245 intron fz + chr3L 14296491 intron fz + chr3L_5_14295001 chr3L_14295001 RAL-808_75b 640 chr3L 14332754 14332772 chr3L 14332845 14332864 4 91 4.5 1.0 2.8 1.1 110 chr3L 14332754 intron fz + chr3L 14332809 intron fz + chr3L 14332864 intron fz + chr3L_4_14330001 chr3L_14330001 RAL-808_75b 641 chr3L 14356531 14356536 chr3L 14356611 14356616 5 80 8.5 5.0 6.8 0.6 85 chr3L 14356531 intron fz + chr3L 14356574 intron fz + chr3L 14356616 intron fz + chr3L_5_14355001 chr3L_14355001 RAL-808_75b 642 chr3L 14356538 14356544 chr3L 14356610 14356616 4 74 7.5 5.0 6.2 0.6 78 chr3L 14356538 intron fz + chr3L 14356577 intron fz + chr3L 14356616 intron fz + chr3L_4_14355001 chr3L_14355001 RAL-808_75b 643 chr3L 14387663 14387679 chr3L 14387800 14387820 4 138 1.5 4.5 3.0 1.0 157 chr3L 14387663 intergenic not near genes chr3L 14387742 intergenic not near genes chr3L 14387820 intergenic not near genes chr3L_4_14385001 chr3L_14385001 RAL-808_75b 644 chr3L 14399177 14399196 chr3L 14399266 14399282 9 87 3.5 0.0 1.8 3.2 105 chr3L 14399177 intergenic not near genes chr3L 14399230 intergenic not near genes chr3L 14399282 intergenic not near genes chr3L_9_14395001 chr3L_14395001 RAL-808_75b 645 chr3L 14458138 14458159 chr3L 14458213 14458238 5 76 0.5 4.0 2.2 1.6 100 chr3L 14458138 intron bbg - chr3L 14458188 intron bbg - chr3L 14458238 intron bbg - chr3L_5_14455001 chr3L_14455001 RAL-808_75b 646 chr3L 14468472 14468477 chr3L 14473649 14473683 copia 4 5195 3.5 1.0 2.2 1.2 5211 chr3L 14468472 intron bbg - chr3L 14471078 intron bbg - chr3L 14473683 intron bbg - chr3L_4_14470001 chr3L_14470001 RAL-808_75b 647 chr3L 14486015 14486046 chr3L 14486096 14486119 5 77 3.0 1.5 2.2 1.6 104 chr3L 14486015 intron bbg - chr3L 14486067 intron bbg - chr3L 14486119 intron bbg - chr3L_5_14485001 chr3L_14485001 RAL-808_75b 648 chr3L 14506639 14506658 chr3L 14506881 14506900 6 240 2.5 5.0 3.8 1.2 261 chr3L 14506639 intron bbg - chr3L 14506770 intron bbg - chr3L 14506900 intron bbg - chr3L_6_14505001 chr3L_14505001 RAL-808_75b 649 chr3L 14522107 14522127 chr3L 14522204 14522226 5 98 2.0 3.5 2.8 1.3 119 chr3L 14522107 intron bbg - chr3L 14522166 intron bbg - chr3L 14522226 intron bbg - chr3L_5_14520001 chr3L_14520001 RAL-808_75b 650 chr3L 14721196 14721210 chr3L 14723023 14723024 Rt1c 5 1823 2.5 2.5 2.5 1.4 1828 chr3L 14721196 intron ome + chr3L 14722110 intron ome + chr3L 14723024 intron ome + chr3L_5_14720001 chr3L_14720001 RAL-808_75b 651 chr3L 14806170 14806175 chr3L 14806224 14806236 4 59 0.5 1.0 0.8 2.2 66 chr3L 14806170 intron CG17839 + chr3L 14806203 intron CG17839 + chr3L 14806236 intron CG17839 + chr3L_4_14805001 chr3L_14805001 RAL-808_75b 652 chr3L 14809425 14809442 chr3L 14809656 14809687 10 235 1.0 3.0 2.0 3.3 262 chr3L 14809425 intron CG17839 + chr3L 14809556 intron CG17839 + chr3L 14809687 intron CG17839 + chr3L_10_14805001 chr3L_14805001 RAL-808_75b 653 chr3L 14962290 14962313 chr3L 14962370 14962378 4 76 2.0 3.0 2.5 1.1 88 chr3L 14962290 intergenic not near genes chr3L 14962334 intergenic not near genes chr3L 14962378 intergenic not near genes chr3L_4_14960001 chr3L_14960001 RAL-808_75b 654 chr3L 15069808 15069810 chr3L 15069932 15069935 4 124 10.0 4.0 7.0 0.5 127 chr3L 15069808 exon cp309 - chr3L 15069872 intron cp309 - chr3L 15069935 exon cp309 - chr3L_4_15065001 chr3L_15065001 RAL-808_75b 655 chr3L 15070113 15070122 chr3L 15070324 15070345 4 218 20.0 29.5 24.8 0.2 232 chr3L 15070113 exon cp309 - chr3L 15070229 exon cp309 - chr3L 15070345 exon cp309 - chr3L_4_15070001 chr3L_15070001 RAL-808_75b 656 chr3L 15085083 15085084 chr3L 15086217 15086218 1360 4 1146 1.5 5.0 3.2 1.0 1135 chr3L 15085083 intron cp309 - chr3L 15085650 intron cp309 - chr3L 15086218 intron cp309 - chr3L_4_15085001 chr3L_15085001 RAL-808_75b 657 chr3L 15273351 15273358 chr3L 15273484 15273502 5 140 0.0 0.0 0.0 5.0 151 chr3L 15273351 intergenic not near genes chr3L 15273426 intergenic not near genes chr3L 15273502 intergenic not near genes chr3L_5_15270001 chr3L_15270001 RAL-808_75b 658 chr3L 15327232 15327252 chr3L 15327304 15327328 4 68 1.0 6.5 3.8 0.8 96 chr3L 15327232 intergenic not near genes chr3L 15327280 intergenic not near genes chr3L 15327328 intergenic not near genes chr3L_4_15325001 chr3L_15325001 RAL-808_75b 659 chr3L 15348112 15348135 chr3L 15348270 15348271 4 150 4.0 4.5 4.2 0.8 159 chr3L 15348112 intergenic not near genes chr3L 15348192 intergenic not near genes chr3L 15348271 intergenic not near genes chr3L_4_15345001 chr3L_15345001 RAL-808_75b 660 chr3L 15348138 15348140 chr3L 15348268 15348269 4 134 2.5 4.0 3.2 1.0 131 chr3L 15348138 intergenic not near genes chr3L 15348204 intergenic not near genes chr3L 15348269 intergenic not near genes chr3L_4_15345001 chr3L_15345001 RAL-808_75b 661 chr3L 15384957 15384989 chr3L 15385084 15385111 4 117 0.5 2.0 1.2 1.8 154 chr3L 15384957 intergenic not near genes chr3L 15385034 intergenic not near genes chr3L 15385111 intergenic not near genes chr3L_4_15385001 chr3L_15385001 RAL-808_75b 662 chr3L 15466045 15466125 chr3L 15466127 15466221 5 87 0.0 0.0 0.0 5.0 176 chr3L 15466045 intergenic not near genes chr3L 15466133 intergenic not near genes chr3L 15466221 intergenic not near genes chr3L_5_15465001 chr3L_15465001 RAL-808_75b 663 chr3L 15541615 15541652 chr3L 15541706 15541727 5 82 2.0 0.5 1.2 2.3 112 chr3L 15541615 intron CrebA + chr3L 15541671 intron CrebA + chr3L 15541727 intron CrebA + chr3L_5_15540001 chr3L_15540001 RAL-808_75b 664 chr3L 15756882 15756913 chr3L 15756962 15756968 6 75 1.5 2.5 2.0 2.0 86 chr3L 15756882 intergenic not near genes chr3L 15756925 intergenic not near genes chr3L 15756968 intergenic not near genes chr3L_6_15755001 chr3L_15755001 RAL-808_75b 665 chr3L 15786772 15786795 chr3L 15786854 15786877 5 76 12.5 11.0 11.8 0.4 105 chr3L 15786772 intergenic not near genes chr3L 15786824 intergenic not near genes chr3L 15786877 intergenic not near genes chr3L_5_15785001 chr3L_15785001 RAL-808_75b 666 chr3L 15836245 15836269 chr3L 15836327 15836345 4 82 6.5 4.0 5.2 0.6 100 chr3L 15836245 exon CG15715 - chr3L 15836295 intron CG15715 - chr3L 15836345 intron CG15715 - chr3L_4_15835001 chr3L_15835001 RAL-808_75b 667 chr3L 15929202 15929221 chr3L 15938349 15938368 roo 4 9146 0.5 1.5 1.0 2.0 9166 chr3L 15929202 intron Pka-C3 - chr3L 15933785 intron Pka-C3 - chr3L 15938368 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 RAL-808_75b 668 chr3L 16102276 16102295 chr3L 16102351 16102380 5 79 11.5 9.0 10.2 0.4 104 chr3L 16102276 exon CG5414 + chr3L 16102328 intron CG5414 + chr3L 16102380 intron CG5414 + chr3L_5_16100001 chr3L_16100001 RAL-808_75b 669 chr3L 16184106 16184140 chr3L 16188925 16188930 X-element 6 4806 3.0 6.5 4.8 1.0 4824 chr3L 16184106 intergenic not near genes chr3L 16186518 intergenic not near genes chr3L 16188930 intergenic not near genes chr3L_6_16185001 chr3L_16185001 RAL-808_75b 670 chr3L 16493990 16494010 chr3L 16494492 16494527 jockey 7 506 11.5 2.5 7.0 0.9 537 chr3L 16493990 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494258 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494527 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_7_16490001 chr3L_16490001 RAL-808_75b 671 chr3L 16540054 16540083 chr3L 16540142 16540157 6 82 2.5 2.5 2.5 1.7 103 chr3L 16540054 intron CG43373 - chr3L 16540106 intron CG43373 - chr3L 16540157 intron CG43373 - chr3L_6_16540001 chr3L_16540001 RAL-808_75b 672 chr3L 16561116 16561129 chr3L 16561187 16561203 9 74 12.0 5.5 8.8 0.9 87 chr3L 16561116 intergenic not near genes chr3L 16561160 intergenic not near genes chr3L 16561203 intergenic not near genes chr3L_9_16560001 chr3L_16560001 RAL-808_75b 673 chr3L 16616539 16616543 chr3L 16621842 16621870 297 4 5311 1.5 2.5 2.0 1.3 5331 chr3L 16616539 3` UTR Abl - chr3L 16619204 3` UTR Abl - chr3L 16621870 3` UTR Abl - chr3L_4_16615001 chr3L_16615001 RAL-808_75b 674 chr3L 16870869 16870897 chr3L 16870960 16870988 5 91 0.0 2.5 1.2 2.3 119 chr3L 16870869 intron Lmpt + chr3L 16870928 intron Lmpt + chr3L 16870988 intron Lmpt + chr3L_5_16870001 chr3L_16870001 RAL-808_75b 675 chr3L 16879837 16879852 chr3L 16879928 16879944 4 92 4.5 4.0 4.2 0.8 107 chr3L 16879837 intron Lmpt + chr3L 16879890 intron Lmpt + chr3L 16879944 intron Lmpt + chr3L_4_16875001 chr3L_16875001 RAL-808_75b 676 chr3L 16945730 16945754 chr3L 16954882 16954883 roo 7 9145 7.0 3.5 5.2 1.1 9153 chr3L 16945730 exon Obp73a + chr3L 16950306 intergenic not near genes chr3L 16954883 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-808_75b 677 chr3L 17474908 17474941 chr3L 17474985 17475018 5 76 2.5 4.0 3.2 1.2 110 chr3L 17474908 intergenic CG7580 +,CG7589 + chr3L 17474963 intergenic CG7580 +,CG7589 + chr3L 17475018 intergenic CG7580 + chr3L_5_17470001 chr3L_17470001 RAL-808_75b 678 chr3L 17516989 17517007 chr3L 17524545 17524548 412 4 7553 4.5 8.0 6.2 0.6 7559 chr3L 17516989 intron CG7564 + chr3L 17520768 intron CG7564 + chr3L 17524548 3` UTR CG7564 + chr3L_4_17520001 chr3L_17520001 RAL-808_75b 679 chr3L 17517008 17517009 chr3L 17524543 17524567 412 4 7543 4.5 8.0 6.2 0.6 7559 chr3L 17517008 intron CG7564 + chr3L 17520788 intron CG7564 + chr3L 17524567 3` UTR CG7564 + chr3L_4_17520001 chr3L_17520001 RAL-808_75b 680 chr3L 17535832 17535843 chr3L 17535925 17535955 5 102 3.0 2.0 2.5 1.4 123 chr3L 17535832 intron Nedd4 + chr3L 17535894 intron Nedd4 + chr3L 17535955 intron Nedd4 + chr3L_5_17535001 chr3L_17535001 RAL-808_75b 681 chr3L 17665645 17665668 chr3L 17665725 17665739 4 79 7.0 5.0 6.0 0.6 94 chr3L 17665645 intron Crtc - chr3L 17665692 intron Crtc - chr3L 17665739 intron Crtc - chr3L_4_17665001 chr3L_17665001 RAL-808_75b 682 chr3L 18034702 18034707 chr3L 18034765 18034771 4 68 6.0 8.5 7.2 0.5 69 chr3L 18034702 intron Eip75B - chr3L 18034736 intron Eip75B - chr3L 18034771 intron Eip75B - chr3L_4_18030001 chr3L_18030001 RAL-808_75b 683 chr3L 18106265 18106280 chr3L 18106384 18106389 5 116 1.0 0.0 0.5 3.3 124 chr3L 18106265 intergenic CG13698 -,mRpS26 + chr3L 18106327 intergenic CG13698 -,mRpS26 + chr3L 18106389 intergenic mRpS26 +,CG13698 - chr3L_5_18105001 chr3L_18105001 RAL-808_75b 684 chr3L 18301355 18301374 chr3L 18301443 18301454 5 87 0.5 1.5 1.0 2.5 99 chr3L 18301355 intergenic CG13700 - chr3L 18301404 intergenic CG13700 - chr3L 18301454 intergenic CG13700 - chr3L_5_18300001 chr3L_18300001 RAL-808_75b 685 chr3L 18377212 18377230 chr3L 18377271 18377277 5 63 3.0 7.0 5.0 0.8 65 chr3L 18377212 intergenic not near genes chr3L 18377244 intergenic not near genes chr3L 18377277 intergenic not near genes chr3L_5_18375001 chr3L_18375001 RAL-808_75b 686 chr3L 18423181 18423202 chr3L 18423401 18423420 4 214 6.0 6.5 6.2 0.6 239 chr3L 18423181 intergenic not near genes chr3L 18423300 intergenic not near genes chr3L 18423420 intergenic not near genes chr3L_4_18420001 chr3L_18420001 RAL-808_75b 687 chr3L 18528635 18528658 chr3L 18537796 18537802 roo 4 9157 2.0 1.0 1.5 1.6 9167 chr3L 18528635 intergenic not near genes chr3L 18533218 intergenic not near genes chr3L 18537802 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-808_75b 688 chr3L 18638575 18638610 chr3L 18638669 18638675 4 86 2.5 2.0 2.2 1.2 100 chr3L 18638575 intron MYPT-75D + chr3L 18638625 intron MYPT-75D + chr3L 18638675 intron MYPT-75D + chr3L_4_18635001 chr3L_18635001 RAL-808_75b 689 chr3L 18701130 18701154 chr3L 18701218 18701242 6 87 3.0 2.0 2.5 1.7 112 chr3L 18701130 intergenic not near genes chr3L 18701186 intergenic not near genes chr3L 18701242 intergenic not near genes chr3L_6_18700001 chr3L_18700001 RAL-808_75b 690 chr3L 18772433 18772440 chr3L 18781088 18781094 roo 8 8664 4.0 1.5 2.8 2.1 8661 chr3L 18772433 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781094 intron ftz-f1 - chr3L_8_18775001 chr3L_18775001 RAL-808_75b 691 chr3L 18929957 18929975 chr3L 18930040 18930054 4 82 4.5 2.5 3.5 0.9 97 chr3L 18929957 intron CG32204 - chr3L 18930006 intron CG32204 - chr3L 18930054 intron CG32204 - chr3L_4_18930001 chr3L_18930001 RAL-808_75b 692 chr3L 18969554 18969562 chr3L 18969630 18969638 4 76 7.5 5.5 6.5 0.5 84 chr3L 18969554 intergenic not near genes chr3L 18969596 intergenic not near genes chr3L 18969638 intergenic not near genes chr3L_4_18965001 chr3L_18965001 RAL-808_75b 693 chr3L 19008859 19008873 chr3L 19009174 19009190 jockey 10 328 1.0 4.0 2.5 2.9 331 chr3L 19008859 intron nkd - chr3L 19009024 intron nkd - chr3L 19009190 intron nkd - chr3L_10_19005001 chr3L_19005001 RAL-808_75b 694 chr3L 19115645 19115672 chr3L 19115817 19115851 BS 7 169 4.5 5.0 4.8 1.2 206 chr3L 19115645 intron CG14082 - chr3L 19115748 intron CG14082 - chr3L 19115851 intron CG14082 - chr3L_7_19115001 chr3L_19115001 RAL-808_75b 695 chr3L 19117052 19117069 chr3L 19124499 19124514 mdg1 5 7446 4.5 3.0 3.8 1.0 7462 chr3L 19117052 intron CG14082 - chr3L 19120783 intron CG14082 - chr3L 19124514 intron CG14082 - chr3L_5_19120001 chr3L_19120001 RAL-808_75b 696 chr3L 19117070 19117074 chr3L 19124493 19124513 mdg1 4 7436 3.0 2.5 2.8 1.1 7443 chr3L 19117070 intron CG14082 - chr3L 19120792 intron CG14082 - chr3L 19124513 intron CG14082 - chr3L_4_19120001 chr3L_19120001 RAL-808_75b 697 chr3L 19208056 19208076 chr3L 19209430 19209445 Doc 5 1370 6.0 1.5 3.8 1.0 1389 chr3L 19208056 intron fz2 - chr3L 19208750 intron fz2 - chr3L 19209445 intron fz2 - chr3L_5_19205001 chr3L_19205001 RAL-808_75b 698 chr3L 19216514 19216535 chr3L 19216591 19216609 6 74 1.5 1.0 1.2 2.7 95 chr3L 19216514 intron fz2 - chr3L 19216562 intron fz2 - chr3L 19216609 intron fz2 - chr3L_6_19215001 chr3L_19215001 RAL-808_75b 699 chr3L 19220633 19220634 chr3L 22908066 22908066 6 3687434 13.0 26.0 19.5 0.3 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-808_75b 700 chr3L 19417808 19417830 chr3L 19417888 19417910 4 80 1.0 5.0 3.0 1.0 102 chr3L 19417808 intergenic not near genes chr3L 19417859 intergenic not near genes chr3L 19417910 intergenic not near genes chr3L_4_19415001 chr3L_19415001 RAL-808_75b 701 chr3L 19426764 19426779 chr3L 19426824 19426828 4 64 10.5 10.5 10.5 0.3 64 chr3L 19426764 intergenic not near genes chr3L 19426796 intergenic not near genes chr3L 19426828 intergenic not near genes chr3L_4_19425001 chr3L_19425001 RAL-808_75b 702 chr3L 19479346 19479376 chr3L 19479424 19479425 8 70 5.5 7.0 6.2 1.1 79 chr3L 19479346 intergenic not near genes chr3L 19479386 intergenic not near genes chr3L 19479425 intergenic not near genes chr3L_8_19475001 chr3L_19475001 RAL-808_75b 703 chr3L 19861820 19861852 chr3L 19863608 19863615 S-element 5 1783 1.0 1.5 1.2 2.3 1795 chr3L 19861820 5` UTR CR45433 + chr3L 19862718 intergenic not near genes chr3L 19863615 intergenic not near genes chr3L_5_19860001 chr3L_19860001 RAL-808_75b 704 chr3L 19933536 19933548 chr3L 19934358 19934367 4 821 7.0 8.5 7.8 0.5 831 chr3L 19933536 intergenic CR45678 + chr3L 19933952 5` UTR CR45678 + chr3L 19934367 intergenic CR45678 + chr3L_4_19930001 chr3L_19930001 RAL-808_75b 705 chr3L 19981209 19981234 chr3L 19981289 19981306 5 74 2.0 3.5 2.8 1.3 97 chr3L 19981209 intergenic CG17732 + chr3L 19981258 intergenic CG17732 + chr3L 19981306 intergenic CG17732 + chr3L_5_19980001 chr3L_19980001 RAL-808_75b 706 chr3L 20086792 20086817 chr3L 20086863 20086868 4 59 3.5 3.0 3.2 1.0 76 chr3L 20086792 intron sNPF-R - chr3L 20086830 intron sNPF-R - chr3L 20086868 intron sNPF-R - chr3L_4_20085001 chr3L_20085001 RAL-808_75b 707 chr3L 20113482 20113495 chr3L 20113577 20113590 4 95 4.0 5.0 4.5 0.7 108 chr3L 20113482 intergenic not near genes chr3L 20113536 intergenic not near genes chr3L 20113590 intergenic not near genes chr3L_4_20110001 chr3L_20110001 RAL-808_75b 708 chr3L 20257335 20257363 chr3L 20258455 20258463 pogo 8 1117 1.0 4.5 2.8 2.1 1128 chr3L 20257335 intron rdgC + chr3L 20257899 intron rdgC + chr3L 20258463 intron rdgC + chr3L_8_20255001 chr3L_20255001 RAL-808_75b 709 chr3L 20283683 20283700 chr3L 20283767 20283784 4 83 5.0 4.5 4.8 0.7 101 chr3L 20283683 intron gogo - chr3L 20283734 intron gogo - chr3L 20283784 intron gogo - chr3L_4_20280001 chr3L_20280001 RAL-808_75b 710 chr3L 20710764 20710788 chr3L 20710835 20710837 5 70 3.5 3.5 3.5 1.1 73 chr3L 20710764 intergenic not near genes chr3L 20710800 intergenic not near genes chr3L 20710837 intergenic not near genes chr3L_5_20710001 chr3L_20710001 RAL-808_75b 711 chr3L 20849285 20849297 chr3L 20849350 20849376 4 74 3.0 3.0 3.0 1.0 91 chr3L 20849285 intron CG32432 - chr3L 20849330 intron CG32432 - chr3L 20849376 intron CG32432 - chr3L_4_20845001 chr3L_20845001 RAL-808_75b 712 chr3L 20849727 20849746 chr3L 20850071 20850080 5 345 1.5 4.0 2.8 1.3 353 chr3L 20849727 intron CG32432 - chr3L 20849904 intron CG32432 - chr3L 20850080 intron CG32432 - chr3L_5_20845001 chr3L_20845001 RAL-808_75b 713 chr3L 21014914 21014948 chr3L 21023395 21023401 Tirant 6 8468 2.0 3.0 2.5 1.7 8487 chr3L 21014914 intron skd - chr3L 21019158 intron skd - chr3L 21023401 intron skd - chr3L_6_21015001 chr3L_21015001 RAL-808_75b 714 chr3L 21082209 21082236 chr3L 21082287 21082312 10 74 1.5 4.5 3.0 2.5 103 chr3L 21082209 intron ko - chr3L 21082260 intron ko - chr3L 21082312 intron ko - chr3L_10_21080001 chr3L_21080001 RAL-808_75b 715 chr3L 21301732 21301758 chr3L 21301818 21301830 9 77 2.0 5.0 3.5 2.0 98 chr3L 21301732 5` UTR CR45432 + chr3L 21301781 5` UTR CR45432 + chr3L 21301830 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_9_21300001 chr3L_21300001 RAL-808_75b 716 chr3L 21319547 21319559 chr3L 21319616 21319618 5 69 1.5 5.0 3.2 1.2 71 chr3L 21319547 5` UTR Rab26 + chr3L 21319582 5` UTR Rab26 + chr3L 21319618 5` UTR Rab26 + chr3L_5_21315001 chr3L_21315001 RAL-808_75b 717 chr3L 21327253 21327283 chr3L 21327329 21327355 4 70 3.5 1.5 2.5 1.1 102 chr3L 21327253 intron Rab26 + chr3L 21327304 intron Rab26 + chr3L 21327355 intron Rab26 + chr3L_4_21325001 chr3L_21325001 RAL-808_75b 718 chr3L 21362852 21362886 chr3L 21362936 21362970 9 76 2.0 2.0 2.0 3.0 118 chr3L 21362852 intergenic not near genes chr3L 21362911 intergenic not near genes chr3L 21362970 intergenic not near genes chr3L_9_21360001 chr3L_21360001 RAL-808_75b 719 chr3L 21540611 21540640 chr3L 21540729 21540743 8 109 1.0 5.0 3.0 2.0 132 chr3L 21540611 3` UTR VhaM9.7-b + chr3L 21540677 3` UTR VhaM9.7-b + chr3L 21540743 3` UTR VhaM9.7-b + chr3L_8_21540001 chr3L_21540001 RAL-808_75b 720 chr3L 21776676 21776701 chr3L 21776763 21776788 6 85 1.0 0.0 0.5 4.0 112 chr3L 21776676 intron,intron CG42689 +,CG42552 + chr3L 21776732 intron,intron CG42689 +,CG42552 + chr3L 21776788 intron,intron CG42689 +,CG42552 + chr3L_6_21775001 chr3L_21775001 RAL-808_75b 721 chr3L 21868349 21868372 chr3L 21868670 21868694 INE-1 10 321 5.5 3.0 4.2 1.9 345 chr3L 21868349 intron mub + chr3L 21868522 intron mub + chr3L 21868694 intron mub + chr3L_10_21865001 chr3L_21865001 RAL-808_75b 722 chr3L 21872428 21872453 chr3L 21872507 21872524 5 76 2.0 4.5 3.2 1.2 96 chr3L 21872428 intron mub + chr3L 21872476 intron mub + chr3L 21872524 intron mub + chr3L_5_21870001 chr3L_21870001 RAL-808_75b 723 chr3L 21883811 21883844 chr3L 21883891 21883894 10 77 2.5 2.5 2.5 2.9 83 chr3L 21883811 intron mub + chr3L 21883852 intron mub + chr3L 21883894 intron mub + chr3L_10_21880001 chr3L_21880001 RAL-808_75b 724 chr3L 21905345 21905363 chr3L 21905415 21905439 7 73 3.5 1.0 2.2 2.2 94 chr3L 21905345 intron mub + chr3L 21905392 intron mub + chr3L 21905439 intron mub + chr3L_7_21905001 chr3L_21905001 RAL-808_75b 725 chr3L 22137529 22137554 chr3L 22137599 22137614 5 68 1.0 2.0 1.5 2.0 85 chr3L 22137529 intron olf413 + chr3L 22137572 intron olf413 + chr3L 22137614 intron olf413 + chr3L_5_22135001 chr3L_22135001 RAL-808_75b 726 chr3L 22223453 22223471 chr3L 22223599 22223619 5 151 1.5 6.0 3.8 1.0 166 chr3L 22223453 intron olf413 + chr3L 22223536 intron olf413 + chr3L 22223619 intron olf413 + chr3L_5_22220001 chr3L_22220001 RAL-808_75b 727 chr3L 22379937 22379965 chr3L 22380034 22380059 4 97 2.0 2.5 2.2 1.2 122 chr3L 22379937 intron Ten-m - chr3L 22379998 intron Ten-m - chr3L 22380059 intron Ten-m - chr3L_4_22375001 chr3L_22375001 RAL-808_75b 728 chr3L 22413888 22413899 chr3L 22413959 22413983 5 77 7.5 3.5 5.5 0.8 95 chr3L 22413888 intergenic not near genes chr3L 22413936 intergenic not near genes chr3L 22413983 intergenic not near genes chr3L_5_22410001 chr3L_22410001 RAL-808_75b 729 chr3L 22555771 22555803 chr3L 22563238 22563273 blood 5 7457 2.0 1.5 1.8 1.8 7502 chr3L 22555771 intergenic not near genes chr3L 22559522 intergenic not near genes chr3L 22563273 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-808_75b 730 chr3L 22577637 22577645 chr3L 22582414 22582432 Doc 6 4785 3.5 5.5 4.5 1.1 4795 chr3L 22577637 intergenic not near genes chr3L 22580034 intergenic not near genes chr3L 22582432 3` UTR CG14459 - chr3L_6_22580001 chr3L_22580001 RAL-808_75b 731 chr3L 22617191 22617218 chr3L 22624642 22624651 blood 9 7448 3.0 2.0 2.5 2.6 7460 chr3L 22617191 intron CG14459 - chr3L 22620921 intron CG14459 - chr3L 22624651 intron CG14459 - chr3L_9_22620001 chr3L_22620001 RAL-808_75b 732 chr3L 22678080 22678100 chr3L 22678167 22678171 5 84 4.5 1.5 3.0 1.2 91 chr3L 22678080 intron CG14457 + chr3L 22678126 intron CG14457 + chr3L 22678171 intron CG14457 + chr3L_5_22675001 chr3L_22675001 RAL-808_75b 733 chr3L 22761408 22761424 chr3L 22766819 22766831 Ivk 4 5419 2.0 1.5 1.8 1.4 5423 chr3L 22761408 intron SPoCk + chr3L 22764120 intron SPoCk + chr3L 22766831 intron SPoCk + chr3L_4_22760001 chr3L_22760001 RAL-808_75b 734 chr3L 22865984 22866014 chr3L 22867117 22867124 Doc 8 1125 2.0 2.5 2.2 2.5 1140 chr3L 22865984 intron CG33170 + chr3L 22866554 intron CG33170 + chr3L 22867124 intron CG33170 + chr3L_8_22865001 chr3L_22865001 RAL-808_75b 735 chr3L 22985903 22985920 chr3L 22985970 22986001 5 78 3.0 3.5 3.2 1.2 98 chr3L 22985903 intergenic not near genes chr3L 22985952 intergenic not near genes chr3L 22986001 intergenic not near genes chr3L_5_22985001 chr3L_22985001 RAL-808_75b 736 chr3L 23182819 23182847 chr3L 23182894 23182918 8 71 1.5 4.0 2.8 2.1 99 chr3L 23182819 intron CG34031 + chr3L 23182868 intron CG34031 + chr3L 23182918 intron CG34031 + chr3L_8_23180001 chr3L_23180001 RAL-808_75b 737 chr3L 24289948 24289962 chr3L 24290009 24290039 4 70 3.5 1.0 2.2 1.2 91 chr3L 24289948 intron Snap25 + chr3L 24289994 intron Snap25 + chr3L 24290039 intron Snap25 + chr3L_4_24285001 chr3L_24285001 RAL-808_75b 738 chr3L 24301290 24301302 chr3L 24301625 24301636 4 335 1.5 2.5 2.0 1.3 346 chr3L 24301290 intergenic not near genes chr3L 24301463 intergenic not near genes chr3L 24301636 intergenic not near genes chr3L_4_24300001 chr3L_24300001 RAL-808_75b 739 chr3L 24363253 24363272 chr3L 24363318 24363328 13 64 1.0 5.5 3.2 3.1 75 chr3L 24363253 intron nvd + chr3L 24363290 intron nvd + chr3L 24363328 intron nvd + chr3L_13_24360001 chr3L_24360001 RAL-808_75b 740 chr3L 25464038 25464095 chr3L 25464107 25464189 7 88 4.5 3.0 3.8 1.5 151 chr3L 25464038 intergenic not near genes chr3L 25464114 intergenic not near genes chr3L 25464189 intergenic not near genes chr3L_7_25460001 chr3L_25460001 RAL-808_75b 741 chr3L 25513592 25513609 chr3L 25513660 25513664 7 69 1.5 4.0 2.8 1.8 72 chr3L 25513592 intron CG41343 - chr3L 25513628 intron CG41343 - chr3L 25513664 intron CG41343 - chr3L_7_25510001 chr3L_25510001 RAL-808_75b 742 chr3L 25627824 25627835 chr3L 25627888 25627915 5 80 3.0 3.5 3.2 1.2 91 chr3L 25627824 intron CG41343 - chr3L 25627870 intron CG41343 - chr3L 25627915 intron CG41343 - chr3L_5_25625001 chr3L_25625001 RAL-808_75b 743 chr3L 26694942 26694959 chr3L 26695007 26695008 7 72 2.5 0.5 1.5 2.8 66 chr3L 26694942 intergenic not near genes chr3L 26694975 intergenic not near genes chr3L 26695008 intergenic not near genes chr3L_7_26690001 chr3L_26690001 RAL-808_75b 744 chr3L 27167947 27167973 chr3L 27168062 27168088 9 114 5.5 3.5 4.5 1.6 141 chr3L 27167947 intergenic not near genes chr3L 27168018 intergenic not near genes chr3L 27168088 intergenic not near genes chr3L_9_27165001 chr3L_27165001 RAL-808_75b 745 chr3L 27727646 27727650 chr3L 27728753 27728757 G-element 4 1107 3.5 3.5 3.5 0.9 1111 chr3L 27727646 intergenic not near genes chr3L 27728202 intergenic not near genes chr3L 27728757 intergenic not near genes chr3L_4_27725001 chr3L_27725001 RAL-808_75b 746 chr3R 4063816 4063827 chr3R 4069092 4069107 5 5276 2.5 1.0 1.8 1.8 5291 chr3R 4063816 intergenic not near genes chr3R 4066462 intergenic not near genes chr3R 4069107 intergenic not near genes chr3R_5_4065001 chr3R_4065001 RAL-808_75b 747 chr3R 4206075 4206093 chr3R 4211645 4211668 mdg3 7 5570 0.5 2.0 1.2 3.2 5593 chr3R 4206075 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211668 intron CG14636 - chr3R_7_4205001 chr3R_4205001 RAL-808_75b 748 chr3R 4408419 4408446 chr3R 4412713 4412733 Juan 4 4294 4.0 2.5 3.2 1.0 4314 chr3R 4408419 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412733 intron CG32944 - chr3R_4_4410001 chr3R_4410001 RAL-808_75b 749 chr3R 4609571 4609580 chr3R 4610709 4610738 1360 6 1147 3.0 4.0 3.5 1.3 1167 chr3R 4609571 intergenic not near genes chr3R 4610154 intergenic not near genes chr3R 4610738 intergenic not near genes chr3R_6_4610001 chr3R_4610001 RAL-808_75b 750 chr3R 4625321 4625348 chr3R 4625707 4625720 7 380 3.0 5.5 4.2 1.3 399 chr3R 4625321 intron 5-HT2A + chr3R 4625520 intron 5-HT2A + chr3R 4625720 intron 5-HT2A + chr3R_7_4625001 chr3R_4625001 RAL-808_75b 751 chr3R 4628355 4628370 chr3R 4628481 4628509 5 130 21.5 14.5 18.0 0.3 154 chr3R 4628355 intron 5-HT2A + chr3R 4628432 intron 5-HT2A + chr3R 4628509 intron 5-HT2A + chr3R_5_4625001 chr3R_4625001 RAL-808_75b 752 chr3R 4753244 4753264 chr3R 4757547 4757552 F-element 4 4297 6.0 5.5 5.8 0.6 4308 chr3R 4753244 intron,intron atms +,CG44098 - chr3R 4755398 intron,intron atms +,CG44098 - chr3R 4757552 intron,exon atms +,CG44098 - chr3R_4_4755001 chr3R_4755001 RAL-808_75b 753 chr3R 4759721 4759746 chr3R 4761218 4761243 hopper2 6 1496 6.5 9.5 8.0 0.7 1522 chr3R 4759721 intron,intron atms +,CG44098 - chr3R 4760482 intron,intron atms +,CG44098 - chr3R 4761243 intron,intron atms +,CG44098 - chr3R_6_4760001 chr3R_4760001 RAL-808_75b 754 chr3R 4759747 4759755 chr3R 4761216 4761222 hopper2 4 1472 6.0 9.5 7.8 0.5 1475 chr3R 4759747 intron,intron atms +,CG44098 - chr3R 4760484 intron,intron atms +,CG44098 - chr3R 4761222 intron,intron atms +,CG44098 - chr3R_4_4760001 chr3R_4760001 RAL-808_75b 755 chr3R 4769161 4769190 chr3R 4769239 4769255 6 73 1.0 4.0 2.5 1.7 94 chr3R 4769161 intron,intron atms +,CG44098 - chr3R 4769208 intron,intron atms +,CG44098 - chr3R 4769255 intron,intron atms +,CG44098 - chr3R_6_4765001 chr3R_4765001 RAL-808_75b 756 chr3R 4835877 4835898 chr3R 4835946 4835976 4 70 6.0 5.0 5.5 0.6 99 chr3R 4835877 intergenic not near genes chr3R 4835926 intergenic not near genes chr3R 4835976 intergenic not near genes chr3R_4_4835001 chr3R_4835001 RAL-808_75b 757 chr3R 4861565 4861591 chr3R 4861646 4861661 5 77 8.5 6.5 7.5 0.6 96 chr3R 4861565 intron opa + chr3R 4861613 intron opa + chr3R 4861661 intron opa + chr3R_5_4860001 chr3R_4860001 RAL-808_75b 758 chr3R 4887478 4887508 chr3R 4894854 4894866 rover 5 7364 1.5 3.0 2.2 1.6 7388 chr3R 4887478 intergenic not near genes chr3R 4891172 intergenic not near genes chr3R 4894866 intergenic not near genes chr3R_5_4890001 chr3R_4890001 RAL-808_75b 759 chr3R 5045856 5045878 chr3R 5052948 5052977 HMS-Beagle 8 7099 3.0 3.5 3.2 1.9 7121 chr3R 5045856 intron CR43635 - chr3R 5049416 intergenic not near genes chr3R 5052977 intergenic CR45588 - chr3R_8_5045001 chr3R_5045001 RAL-808_75b 760 chr3R 5067981 5068014 chr3R 5073498 5073531 mdg3 6 5508 4.0 2.5 3.2 1.4 5550 chr3R 5067981 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073531 intergenic not near genes chr3R_6_5070001 chr3R_5070001 RAL-808_75b 761 chr3R 5186014 5186029 chr3R 5186089 5186108 5 78 6.5 5.5 6.0 0.7 94 chr3R 5186014 intron cno - chr3R 5186061 intron cno - chr3R 5186108 intron cno - chr3R_5_5185001 chr3R_5185001 RAL-808_75b 762 chr3R 5278087 5278121 chr3R 5278168 5278201 4 80 15.5 17.0 16.2 0.2 114 chr3R 5278087 intron mtd - chr3R 5278144 intron mtd - chr3R 5278201 intron mtd - chr3R_4_5275001 chr3R_5275001 RAL-808_75b 763 chr3R 5338402 5338425 chr3R 5343579 5343590 Rt1c 8 5176 5.0 6.0 5.5 1.2 5188 chr3R 5338402 intron mtd - chr3R 5340996 intron mtd - chr3R 5343590 intron mtd - chr3R_8_5340001 chr3R_5340001 RAL-808_75b 764 chr3R 5385981 5386001 chr3R 5386144 5386156 7 166 2.5 3.5 3.0 1.8 175 chr3R 5385981 intron kkv - chr3R 5386068 intron kkv - chr3R 5386156 intron kkv - chr3R_7_5385001 chr3R_5385001 RAL-808_75b 765 chr3R 5386004 5386006 chr3R 5386142 5386172 5 153 1.5 3.0 2.2 1.6 168 chr3R 5386004 intron kkv - chr3R 5386088 intron kkv - chr3R 5386172 intron kkv - chr3R_5_5385001 chr3R_5385001 RAL-808_75b 766 chr3R 5445966 5445993 chr3R 5452426 5452453 Burdock 5 6458 2.0 2.5 2.2 1.6 6487 chr3R 5445966 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452453 intron CG14669 + chr3R_5_5445001 chr3R_5445001 RAL-808_75b 767 chr3R 5463120 5463151 chr3R 5463228 5463234 6 102 2.5 4.0 3.2 1.4 114 chr3R 5463120 intron PEK - chr3R 5463177 intron PEK - chr3R 5463234 intron PEK - chr3R_6_5460001 chr3R_5460001 RAL-808_75b 768 chr3R 5734652 5734683 chr3R 5734740 5734771 6 86 4.5 7.0 5.8 0.9 119 chr3R 5734652 exon CG1239 + chr3R 5734712 3` UTR CG2100 - chr3R 5734771 exon CG2100 - chr3R_6_5730001 chr3R_5730001 RAL-808_75b 769 chr3R 5746024 5746043 chr3R 5746259 5746277 pogo 4 233 2.0 3.5 2.8 1.1 253 chr3R 5746024 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746277 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-808_75b 770 chr3R 5772384 5772406 chr3R 5772542 5772564 4 158 2.0 4.0 3.0 1.0 180 chr3R 5772384 intron CG2082 - chr3R 5772474 intron CG2082 - chr3R 5772564 intron CG2082 - chr3R_4_5770001 chr3R_5770001 RAL-808_75b 771 chr3R 5927562 5927591 chr3R 5927800 5927817 pogo 6 227 3.5 5.5 4.5 1.1 255 chr3R 5927562 intron CG34113 - chr3R 5927690 intron CG34113 - chr3R 5927817 intron CG34113 - chr3R_6_5925001 chr3R_5925001 RAL-808_75b 772 chr3R 5989344 5989369 chr3R 5989427 5989452 7 79 2.5 6.0 4.2 1.3 108 chr3R 5989344 5` UTR CR44927 + chr3R 5989398 5` UTR CR44927 + chr3R 5989452 5` UTR CR44927 + chr3R_7_5985001 chr3R_5985001 RAL-808_75b 773 chr3R 6015977 6015990 chr3R 6024442 6024450 Tirant 5 8465 3.5 6.5 5.0 0.8 8473 chr3R 6015977 intergenic not near genes chr3R 6020214 intergenic not near genes chr3R 6024450 intergenic not near genes chr3R_5_6020001 chr3R_6020001 RAL-808_75b 774 chr3R 6048455 6048464 chr3R 6048538 6048547 4 83 10.0 8.0 9.0 0.4 92 chr3R 6048455 intergenic not near genes chr3R 6048501 intergenic not near genes chr3R 6048547 intergenic not near genes chr3R_4_6045001 chr3R_6045001 RAL-808_75b 775 chr3R 6117415 6117441 chr3R 6117536 6117547 6 110 5.0 6.0 5.5 0.9 132 chr3R 6117415 intergenic not near genes chr3R 6117481 intergenic not near genes chr3R 6117547 intergenic not near genes chr3R_6_6115001 chr3R_6115001 RAL-808_75b 776 chr3R 6121173 6121192 chr3R 6121375 6121410 BS 4 213 0.0 1.0 0.5 2.7 237 chr3R 6121173 intergenic not near genes chr3R 6121292 intergenic not near genes chr3R 6121410 intergenic not near genes chr3R_4_6120001 chr3R_6120001 RAL-808_75b 777 chr3R 6158507 6158542 chr3R 6167090 6167094 Tirant 10 8573 2.0 5.0 3.5 2.2 8587 chr3R 6158507 intergenic not near genes chr3R 6162800 intergenic not near genes chr3R 6167094 intergenic CG1077 + chr3R_10_6160001 chr3R_6160001 RAL-808_75b 778 chr3R 6175172 6175193 chr3R 6182444 6182462 HMS-Beagle2 4 7266 4.5 4.0 4.2 0.8 7290 chr3R 6175172 intergenic Osi1 + chr3R 6178817 intron CR45194 + chr3R 6182462 intergenic CR45194 + chr3R_4_6175001 chr3R_6175001 RAL-808_75b 779 chr3R 6175197 6175205 chr3R 6182443 6182459 HMS-Beagle2 4 7258 0.5 3.5 2.0 1.3 7262 chr3R 6175197 intergenic Osi1 + chr3R 6178828 intron CR45194 + chr3R 6182459 intergenic CR45194 + chr3R_4_6175001 chr3R_6175001 RAL-808_75b 780 chr3R 6191178 6191195 chr3R 6191258 6191275 5 77 4.5 2.5 3.5 1.1 97 chr3R 6191178 intron NPFR + chr3R 6191226 intron NPFR + chr3R 6191275 intron NPFR + chr3R_5_6190001 chr3R_6190001 RAL-808_75b 781 chr3R 6197646 6197675 chr3R 6198189 6198214 5 540 3.5 5.0 4.2 1.0 568 chr3R 6197646 intergenic not near genes chr3R 6197930 intergenic not near genes chr3R 6198214 intergenic not near genes chr3R_5_6195001 chr3R_6195001 RAL-808_75b 782 chr3R 6482857 6482887 chr3R 6482934 6482935 6 71 7.5 7.0 7.2 0.7 78 chr3R 6482857 intron CG15186 + chr3R 6482896 intron CG15186 + chr3R 6482935 intron CG15186 + chr3R_6_6480001 chr3R_6480001 RAL-808_75b 783 chr3R 6643242 6643261 chr3R 6643336 6643338 4 89 4.5 3.0 3.8 0.8 96 chr3R 6643242 3` UTR,exon CG31286 +,CG1315 - chr3R 6643290 3` UTR,intron CG31286 +,CG1315 - chr3R 6643338 3` UTR,intron CG31286 +,CG1315 - chr3R_4_6640001 chr3R_6640001 RAL-808_75b 784 chr3R 6643264 6643289 chr3R 6643329 6643366 4 74 1.5 2.5 2.0 1.3 102 chr3R 6643264 3` UTR,intron CG31286 +,CG1315 - chr3R 6643315 3` UTR,intron CG31286 +,CG1315 - chr3R 6643366 intron CG1315 - chr3R_4_6640001 chr3R_6640001 RAL-808_75b 785 chr3R 6842791 6842814 chr3R 6842859 6842875 5 73 1.0 6.0 3.5 1.1 84 chr3R 6842791 intron Scr - chr3R 6842833 intron Scr - chr3R 6842875 intron Scr - chr3R_5_6840001 chr3R_6840001 RAL-808_75b 786 chr3R 7026856 7026887 chr3R 7026942 7026967 4 76 3.5 4.5 4.0 0.8 111 chr3R 7026856 intergenic not near genes chr3R 7026912 intergenic not near genes chr3R 7026967 intergenic not near genes chr3R_4_7025001 chr3R_7025001 RAL-808_75b 787 chr3R 7092785 7092816 chr3R 7093349 7093380 5 561 3.5 17.0 10.2 0.4 595 chr3R 7092785 3` UTR CR43685 - chr3R 7093082 intron CR43685 - chr3R 7093380 3` UTR CR43685 - chr3R_5_7090001 chr3R_7090001 RAL-808_75b 788 chr3R 7103309 7103315 chr3R 7103365 7103383 4 65 2.5 2.5 2.5 1.1 74 chr3R 7103309 intron Alh - chr3R 7103346 intron Alh - chr3R 7103383 intron Alh - chr3R_4_7100001 chr3R_7100001 RAL-808_75b 789 chr3R 7147515 7147528 chr3R 7147587 7147610 5 81 9.5 9.5 9.5 0.5 95 chr3R 7147515 intron,intron CG2656 +,gfzf - chr3R 7147562 intron,intron CG2656 +,gfzf - chr3R 7147610 intron,intron CG2656 +,gfzf - chr3R_5_7145001 chr3R_7145001 RAL-808_75b 790 chr3R 7438918 7438944 chr3R 7438996 7439022 7 73 4.5 6.0 5.2 1.1 104 chr3R 7438918 intergenic not near genes chr3R 7438970 intergenic not near genes chr3R 7439022 intergenic not near genes chr3R_7_7435001 chr3R_7435001 RAL-808_75b 791 chr3R 7556942 7556965 chr3R 7557027 7557029 7 87 5.0 6.0 5.5 1.1 87 chr3R 7556942 intergenic not near genes chr3R 7556986 intergenic not near genes chr3R 7557029 intergenic not near genes chr3R_7_7555001 chr3R_7555001 RAL-808_75b 792 chr3R 7726154 7726187 chr3R 7726231 7726242 6 70 10.0 10.0 10.0 0.5 88 chr3R 7726154 intergenic not near genes chr3R 7726198 intergenic not near genes chr3R 7726242 intergenic not near genes chr3R_6_7725001 chr3R_7725001 RAL-808_75b 793 chr3R 7729479 7729495 chr3R 7737405 7737413 Stalker2 6 7933 2.5 3.0 2.8 1.6 7934 chr3R 7729479 intergenic not near genes chr3R 7733446 intergenic not near genes chr3R 7737413 intergenic not near genes chr3R_6_7730001 chr3R_7730001 RAL-808_75b 794 chr3R 7827030 7827056 chr3R 7827109 7827132 4 78 12.0 14.0 13.0 0.3 102 chr3R 7827030 intron CG34384 + chr3R 7827081 intron CG34384 + chr3R 7827132 intron CG34384 + chr3R_4_7825001 chr3R_7825001 RAL-808_75b 795 chr3R 7840927 7840960 chr3R 7841073 7841104 4 145 1.0 3.5 2.2 1.2 177 chr3R 7840927 intron CG34384 + chr3R 7841016 intron CG34384 + chr3R 7841104 intron CG34384 + chr3R_4_7840001 chr3R_7840001 RAL-808_75b 796 chr3R 7849654 7849677 chr3R 7850821 7850832 1360 4 1161 1.0 5.5 3.2 1.0 1178 chr3R 7849654 intron CG34384 + chr3R 7850243 intron CG34384 + chr3R 7850832 intron CG34384 + chr3R_4_7850001 chr3R_7850001 RAL-808_75b 797 chr3R 8090270 8090301 chr3R 8090447 8090476 4 172 1.0 3.5 2.2 1.2 206 chr3R 8090270 5` UTR CR44330 + chr3R 8090373 intergenic CR44330 + chr3R 8090476 intergenic CR44330 + chr3R_4_8090001 chr3R_8090001 RAL-808_75b 798 chr3R 8094407 8094437 chr3R 8099712 8099742 Transpac 5 5305 0.5 2.5 1.5 2.0 5335 chr3R 8094407 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099742 intron CG7900 + chr3R_5_8095001 chr3R_8095001 RAL-808_75b 799 chr3R 8101763 8101786 chr3R 8104847 8104869 G2 9 3081 2.0 1.5 1.8 3.2 3106 chr3R 8101763 exon CG7900 + chr3R 8103316 intron CG7900 + chr3R 8104869 3` UTR CG7900 + chr3R_9_8100001 chr3R_8100001 RAL-808_75b 800 chr3R 8188402 8188526 chr3R 8188487 8188617 4 86 1.0 2.5 1.8 1.4 215 chr3R 8188402 intergenic not near genes chr3R 8188510 intergenic not near genes chr3R 8188617 intergenic not near genes chr3R_4_8185001 chr3R_8185001 RAL-808_75b 801 chr3R 8207554 8207582 chr3R 8208399 8208413 F-element 6 836 3.5 5.0 4.2 1.2 859 chr3R 8207554 intergenic not near genes chr3R 8207984 intergenic not near genes chr3R 8208413 intergenic not near genes chr3R_6_8205001 chr3R_8205001 RAL-808_75b 802 chr3R 8219659 8219681 chr3R 8219961 8219990 5 306 1.5 5.0 3.2 1.2 331 chr3R 8219659 exon CG7800 + chr3R 8219824 intergenic CG7800 +,CG18249 + chr3R 8219990 intergenic CG18249 +,CG7800 + chr3R_5_8215001 chr3R_8215001 RAL-808_75b 803 chr3R 8339246 8339246 chr3R 21907534 21907536 5 13568289 20.5 19.5 20.0 0.2 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-808_75b 804 chr3R 8339247 8339247 chr3R 21907535 21907536 4 13568289 20.0 19.5 19.8 0.2 13568289 chr3R 8339247 intergenic not near genes chr3R 15123392 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-808_75b 805 chr3R 8403005 8403037 chr3R 8412171 8412197 roo 12 9159 4.0 3.0 3.5 2.7 9192 chr3R 8403005 intron CG45263 - chr3R 8407601 intron CG45263 - chr3R 8412197 intron CG45263 - chr3R_12_8405001 chr3R_8405001 RAL-808_75b 806 chr3R 8570479 8570511 chr3R 8575115 8575129 HMS-Beagle 9 4626 1.5 4.5 3.0 2.2 4650 chr3R 8570479 intergenic not near genes chr3R 8572804 intergenic not near genes chr3R 8575129 intergenic not near genes chr3R_9_8570001 chr3R_8570001 RAL-808_75b 807 chr3R 8601786 8601799 chr3R 8610917 8610934 roo 4 9143 2.5 4.0 3.2 1.0 9148 chr3R 8601786 intron 5-HT2B + chr3R 8606360 intron 5-HT2B + chr3R 8610934 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-808_75b 808 chr3R 8707362 8707384 chr3R 8709794 8709825 jockey 10 2433 3.5 4.5 4.0 2.0 2463 chr3R 8707362 intergenic not near genes chr3R 8708594 intergenic not near genes chr3R 8709825 intergenic not near genes chr3R_10_8705001 chr3R_8705001 RAL-808_75b 809 chr3R 8993430 8993444 chr3R 8993502 8993502 5 71 7.0 7.5 7.2 0.6 72 chr3R 8993430 exon CG11975 + chr3R 8993466 intron CG11975 + chr3R 8993502 intron CG11975 + chr3R_5_8990001 chr3R_8990001 RAL-808_75b 810 chr3R 9073221 9073240 chr3R 9073298 9073313 6 78 10.0 6.5 8.2 0.7 92 chr3R 9073221 intron pum - chr3R 9073267 intron pum - chr3R 9073313 intron pum - chr3R_6_9070001 chr3R_9070001 RAL-808_75b 811 chr3R 9101841 9101872 chr3R 9101939 9101940 4 89 1.5 2.0 1.8 1.4 99 chr3R 9101841 intron pum - chr3R 9101890 intron pum - chr3R 9101940 intron pum - chr3R_4_9100001 chr3R_9100001 RAL-808_75b 812 chr3R 9141174 9141189 chr3R 9141260 9141278 4 86 4.5 7.0 5.8 0.6 104 chr3R 9141174 intron pum - chr3R 9141226 intron pum - chr3R 9141278 intron pum - chr3R_4_9140001 chr3R_9140001 RAL-808_75b 813 chr3R 9362975 9363005 chr3R 9363064 9363087 4 80 0.5 0.5 0.5 2.7 112 chr3R 9362975 3` UTR CG45050 + chr3R 9363031 intergenic CG45050 +,CG18473 + chr3R 9363087 intergenic CG45050 +,CG18473 + chr3R_4_9360001 chr3R_9360001 RAL-808_75b 814 chr3R 9732978 9733007 chr3R 9733058 9733081 5 79 4.5 8.0 6.2 0.7 103 chr3R 9732978 intron alphaTub85E - chr3R 9733030 intron alphaTub85E - chr3R 9733081 intron alphaTub85E - chr3R_5_9730001 chr3R_9730001 RAL-808_75b 815 chr3R 9836874 9836882 chr3R 9836962 9836970 4 88 8.0 2.5 5.2 0.6 96 chr3R 9836874 intron Teh1 - chr3R 9836922 intron Teh1 - chr3R 9836970 intron Teh1 - chr3R_4_9835001 chr3R_9835001 RAL-808_75b 816 chr3R 9836884 9836901 chr3R 9836958 9836988 4 80 4.0 2.0 3.0 1.0 104 chr3R 9836884 intron Teh1 - chr3R 9836936 intron Teh1 - chr3R 9836988 intron Teh1 - chr3R_4_9835001 chr3R_9835001 RAL-808_75b 817 chr3R 10140433 10140457 chr3R 10140524 10140548 6 91 3.5 1.5 2.5 1.7 115 chr3R 10140433 3` UTR TAF1B - chr3R 10140490 3` UTR TAF1B - chr3R 10140548 3` UTR TAF1B - chr3R_6_10140001 chr3R_10140001 RAL-808_75b 818 chr3R 10160322 10160349 chr3R 10164380 10164403 11 4061 33.0 35.5 34.2 0.3 4081 chr3R 10160322 exon CG6254 - chr3R 10162362 intron Best1 - chr3R 10164403 intron Best1 - chr3R_11_10160001 chr3R_10160001 RAL-808_75b 819 chr3R 10203867 10203899 chr3R 10203995 10203998 6 119 2.0 3.5 2.8 1.6 131 chr3R 10203867 intron Syn + chr3R 10203932 intron,3` UTR Syn +,Timp - chr3R 10203998 intron,3` UTR Syn +,Timp - chr3R_6_10200001 chr3R_10200001 RAL-808_75b 820 chr3R 10240950 10240961 chr3R 10241023 10241049 5 82 3.5 7.0 5.2 0.8 99 chr3R 10240950 intron CG42795 + chr3R 10241000 intron CG42795 + chr3R 10241049 intron CG42795 + chr3R_5_10240001 chr3R_10240001 RAL-808_75b 821 chr3R 10277143 10277159 chr3R 10277223 10277234 4 78 4.5 3.5 4.0 0.8 91 chr3R 10277143 intron CG43143 + chr3R 10277188 intron CG43143 + chr3R 10277234 intron CG43143 + chr3R_4_10275001 chr3R_10275001 RAL-808_75b 822 chr3R 11085478 11085490 chr3R 11085537 11085567 4 70 0.0 1.0 0.5 2.7 89 chr3R 11085478 3` UTR CR44940 - chr3R 11085522 intergenic CR44940 - chr3R 11085567 intergenic CR44940 - chr3R_4_11085001 chr3R_11085001 RAL-808_75b 823 chr3R 11104971 11105000 chr3R 11105057 11105065 4 79 7.0 7.5 7.2 0.5 94 chr3R 11104971 intergenic not near genes chr3R 11105018 intergenic not near genes chr3R 11105065 intergenic not near genes chr3R_4_11105001 chr3R_11105001 RAL-808_75b 824 chr3R 11197988 11198000 chr3R 11198086 11198099 5 97 7.0 5.0 6.0 0.7 111 chr3R 11197988 intron cu + chr3R 11198044 intron cu + chr3R 11198099 intron cu + chr3R_5_11195001 chr3R_11195001 RAL-808_75b 825 chr3R 11198002 11198009 chr3R 11198081 11198108 4 89 3.5 4.5 4.0 0.8 106 chr3R 11198002 intron cu + chr3R 11198055 intron cu + chr3R 11198108 intron cu + chr3R_4_11195001 chr3R_11195001 RAL-808_75b 826 chr3R 11379235 11379252 chr3R 11388390 11388404 roo 5 9154 4.5 3.5 4.0 1.0 9169 chr3R 11379235 intron pros + chr3R 11383820 intron pros + chr3R 11388404 intron pros + chr3R_5_11380001 chr3R_11380001 RAL-808_75b 827 chr3R 11633343 11633370 chr3R 11633419 11633446 4 76 1.5 1.5 1.5 1.6 103 chr3R 11633343 3` UTR Csk - chr3R 11633394 3` UTR Csk - chr3R 11633446 3` UTR Csk - chr3R_4_11630001 chr3R_11630001 RAL-808_75b 828 chr3R 11689726 11689747 chr3R 11689805 11689829 4 80 8.0 7.0 7.5 0.5 103 chr3R 11689726 exon CG6908 - chr3R 11689778 exon CG6908 - chr3R 11689829 exon CG6908 - chr3R_4_11685001 chr3R_11685001 RAL-808_75b 829 chr3R 11695738 11695773 chr3R 11695819 11695830 6 69 10.5 12.0 11.2 0.5 92 chr3R 11695738 intergenic not near genes chr3R 11695784 intergenic not near genes chr3R 11695830 intergenic not near genes chr3R_6_11695001 chr3R_11695001 RAL-808_75b 830 chr3R 11920993 11921001 chr3R 11921075 11921092 4 88 5.0 8.0 6.5 0.5 99 chr3R 11920993 intron Cad87A - chr3R 11921042 intron Cad87A - chr3R 11921092 intron Cad87A - chr3R_4_11920001 chr3R_11920001 RAL-808_75b 831 chr3R 12022885 12022916 chr3R 12025062 12025086 pogo 8 2173 1.5 4.5 3.0 2.0 2201 chr3R 12022885 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025086 intergenic not near genes chr3R_8_12020001 chr3R_12020001 RAL-808_75b 832 chr3R 12085669 12085686 chr3R 12085944 12085950 5 273 15.5 6.0 10.8 0.4 281 chr3R 12085669 intron CG14741 - chr3R 12085810 intron CG14741 - chr3R 12085950 intron CG14741 - chr3R_5_12085001 chr3R_12085001 RAL-808_75b 833 chr3R 12097266 12097276 chr3R 12097344 12097380 7 94 7.0 8.0 7.5 0.8 114 chr3R 12097266 intron dpr17 + chr3R 12097323 intron dpr17 + chr3R 12097380 intron dpr17 + chr3R_7_12095001 chr3R_12095001 RAL-808_75b 834 chr3R 12111898 12111924 chr3R 12111974 12111998 7 75 3.5 4.5 4.0 1.4 100 chr3R 12111898 intergenic dpr17 + chr3R 12111948 intergenic not near genes chr3R 12111998 intergenic not near genes chr3R_7_12110001 chr3R_12110001 RAL-808_75b 835 chr3R 12249147 12249176 chr3R 12249241 12249271 4 95 4.5 4.5 4.5 0.7 124 chr3R 12249147 intergenic not near genes chr3R 12249209 intergenic not near genes chr3R 12249271 intergenic not near genes chr3R_4_12245001 chr3R_12245001 RAL-808_75b 836 chr3R 12544707 12544739 chr3R 12544785 12544807 6 75 13.5 14.5 14.0 0.4 100 chr3R 12544707 intron Octbeta3R - chr3R 12544757 intron Octbeta3R - chr3R 12544807 intron Octbeta3R - chr3R_6_12540001 chr3R_12540001 RAL-808_75b 837 chr3R 12558239 12558248 chr3R 12558325 12558327 4 83 11.0 4.0 7.5 0.5 88 chr3R 12558239 intron Octbeta2R - chr3R 12558283 intron Octbeta2R - chr3R 12558327 intron Octbeta2R - chr3R_4_12555001 chr3R_12555001 RAL-808_75b 838 chr3R 12602403 12602417 chr3R 12602481 12602494 5 75 7.0 7.5 7.2 0.6 91 chr3R 12602403 intergenic not near genes chr3R 12602448 intergenic not near genes chr3R 12602494 intergenic not near genes chr3R_5_12600001 chr3R_12600001 RAL-808_75b 839 chr3R 12644752 12644780 chr3R 12644821 12644842 8 66 11.0 9.5 10.2 0.7 90 chr3R 12644752 intergenic not near genes chr3R 12644797 intergenic not near genes chr3R 12644842 intergenic not near genes chr3R_8_12640001 chr3R_12640001 RAL-808_75b 840 chr3R 12720822 12720840 chr3R 12720988 12721012 4 166 11.0 9.5 10.2 0.4 190 chr3R 12720822 intron Men - chr3R 12720917 intron Men - chr3R 12721012 intron Men - chr3R_4_12720001 chr3R_12720001 RAL-808_75b 841 chr3R 12825635 12825855 chr3R 12825687 12825910 4 64 11.0 8.5 9.8 0.4 275 chr3R 12825635 intergenic not near genes chr3R 12825772 intergenic not near genes chr3R 12825910 intergenic not near genes chr3R_4_12825001 chr3R_12825001 RAL-808_75b 842 chr3R 12866494 12866517 chr3R 12866639 12866646 9 147 4.0 2.5 3.2 2.1 152 chr3R 12866494 intergenic not near genes chr3R 12866570 intergenic not near genes chr3R 12866646 intergenic not near genes chr3R_9_12865001 chr3R_12865001 RAL-808_75b 843 chr3R 12885111 12885127 chr3R 12885218 12885226 7 103 5.0 5.0 5.0 1.2 115 chr3R 12885111 intergenic not near genes chr3R 12885168 intergenic not near genes chr3R 12885226 intergenic not near genes chr3R_7_12885001 chr3R_12885001 RAL-808_75b 844 chr3R 13067848 13067864 chr3R 13067927 13067943 4 80 9.0 15.0 12.0 0.3 95 chr3R 13067848 intron sim + chr3R 13067896 intron sim + chr3R 13067943 intron sim + chr3R_4_13065001 chr3R_13065001 RAL-808_75b 845 chr3R 13075369 13075389 chr3R 13075450 13075467 6 80 3.5 3.5 3.5 1.3 98 chr3R 13075369 intron sim + chr3R 13075418 intron sim + chr3R 13075467 intron sim + chr3R_6_13075001 chr3R_13075001 RAL-808_75b 846 chr3R 13143058 13143066 chr3R 13148618 13148633 mdg3 4 5565 3.5 10.5 7.0 0.5 5575 chr3R 13143058 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145846 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148633 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-808_75b 847 chr3R 13195966 13195977 chr3R 13196060 13196071 4 92 11.0 11.0 11.0 0.3 105 chr3R 13195966 intergenic not near genes chr3R 13196018 intergenic not near genes chr3R 13196071 intergenic not near genes chr3R_4_13195001 chr3R_13195001 RAL-808_75b 848 chr3R 13349002 13349032 chr3R 13349078 13349108 4 74 3.0 2.5 2.8 1.1 106 chr3R 13349002 intergenic not near genes chr3R 13349055 intergenic not near genes chr3R 13349108 intergenic not near genes chr3R_4_13345001 chr3R_13345001 RAL-808_75b 849 chr3R 13435245 13435415 chr3R 13435380 13435590 4 164 3.0 6.0 4.5 0.7 345 chr3R 13435245 intergenic yrt - chr3R 13435418 intergenic yrt - chr3R 13435590 intergenic not near genes chr3R_4_13435001 chr3R_13435001 RAL-808_75b 850 chr3R 13440914 13440932 chr3R 13441057 13441069 5 142 7.0 5.0 6.0 0.7 155 chr3R 13440914 intergenic not near genes chr3R 13440992 intergenic not near genes chr3R 13441069 intergenic not near genes chr3R_5_13440001 chr3R_13440001 RAL-808_75b 851 chr3R 13555691 13555711 chr3R 13555764 13555778 5 71 8.5 5.5 7.0 0.6 87 chr3R 13555691 intergenic not near genes chr3R 13555734 intergenic not near genes chr3R 13555778 intergenic not near genes chr3R_5_13555001 chr3R_13555001 RAL-808_75b 852 chr3R 13941422 13941458 chr3R 13941501 13941510 5 72 5.5 6.0 5.8 0.7 88 chr3R 13941422 intergenic not near genes chr3R 13941466 intergenic not near genes chr3R 13941510 intergenic not near genes chr3R_5_13940001 chr3R_13940001 RAL-808_75b 853 chr3R 13975378 13975398 chr3R 13975458 13975470 6 77 2.0 6.0 4.0 1.2 92 chr3R 13975378 intron rdx - chr3R 13975424 intron rdx - chr3R 13975470 intron rdx - chr3R_6_13975001 chr3R_13975001 RAL-808_75b 854 chr3R 14249088 14249111 chr3R 14249178 14249215 5 97 5.0 3.5 4.2 1.0 127 chr3R 14249088 intergenic not near genes chr3R 14249152 intergenic not near genes chr3R 14249215 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-808_75b 855 chr3R 14295529 14295554 chr3R 14295610 14295637 7 80 3.0 4.5 3.8 1.5 108 chr3R 14295529 intron CG12207 + chr3R 14295583 intron CG12207 + chr3R 14295637 intron CG12207 + chr3R_7_14295001 chr3R_14295001 RAL-808_75b 856 chr3R 14463936 14463961 chr3R 14464275 14464286 8 336 5.0 2.0 3.5 1.8 350 chr3R 14463936 intron cv-c - chr3R 14464111 intron cv-c - chr3R 14464286 intron cv-c - chr3R_8_14460001 chr3R_14460001 RAL-808_75b 857 chr3R 14546048 14546072 chr3R 14546117 14546149 5 74 5.0 2.5 3.8 1.0 101 chr3R 14546048 intron Pde6 - chr3R 14546098 intron Pde6 - chr3R 14546149 intron Pde6 - chr3R_5_14545001 chr3R_14545001 RAL-808_75b 858 chr3R 14704383 14704409 chr3R 14704460 14704484 8 73 2.5 4.0 3.2 1.9 101 chr3R 14704383 intron kibra - chr3R 14704434 intron kibra - chr3R 14704484 intron kibra - chr3R_8_14700001 chr3R_14700001 RAL-808_75b 859 chr3R 14851474 14851503 chr3R 14851610 14851621 12 130 3.0 3.5 3.2 2.9 147 chr3R 14851474 intron btsz - chr3R 14851548 intron btsz - chr3R 14851621 intron btsz - chr3R_12_14850001 chr3R_14850001 RAL-808_75b 860 chr3R 15040862 15040883 chr3R 15040987 15041007 4 123 5.5 3.0 4.2 0.8 145 chr3R 15040862 intergenic not near genes chr3R 15040934 intergenic not near genes chr3R 15041007 intergenic not near genes chr3R_4_15040001 chr3R_15040001 RAL-808_75b 861 chr3R 15088086 15088096 chr3R 15088178 15088194 4 94 4.0 4.5 4.2 0.8 108 chr3R 15088086 intron CG6966 - chr3R 15088140 intron CG6966 - chr3R 15088194 intron CG6966 - chr3R_4_15085001 chr3R_15085001 RAL-808_75b 862 chr3R 15132077 15132088 chr3R 15135116 15135145 Juan 5 3044 6.5 4.5 5.5 0.8 3068 chr3R 15132077 intergenic CG42788 - chr3R 15133611 intergenic not near genes chr3R 15135145 3` UTR CG6912 - chr3R_5_15130001 chr3R_15130001 RAL-808_75b 863 chr3R 15471003 15471018 chr3R 15471066 15471096 11 71 6.0 5.0 5.5 1.7 93 chr3R 15471003 intron AdamTS-A - chr3R 15471050 intron AdamTS-A - chr3R 15471096 intron AdamTS-A - chr3R_11_15470001 chr3R_15470001 RAL-808_75b 864 chr3R 15571244 15571498 chr3R 15571350 15571589 10 101 2.5 2.5 2.5 2.9 345 chr3R 15571244 intergenic not near genes chr3R 15571416 intergenic not near genes chr3R 15571589 intergenic not near genes chr3R_10_15570001 chr3R_15570001 RAL-808_75b 865 chr3R 15601181 15601192 chr3R 15608684 15608714 412 8 7514 3.0 3.5 3.2 1.9 7533 chr3R 15601181 intergenic not near genes chr3R 15604948 intergenic not near genes chr3R 15608714 intergenic not near genes chr3R_8_15600001 chr3R_15600001 RAL-808_75b 866 chr3R 16073439 16073475 chr3R 16073543 16073575 9 99 2.0 0.5 1.2 4.1 136 chr3R 16073439 intron Mhcl - chr3R 16073507 intron Mhcl - chr3R 16073575 intron Mhcl - chr3R_9_16070001 chr3R_16070001 RAL-808_75b 867 chr3R 16215118 16215124 chr3R 16215216 16215228 4 103 1.5 2.0 1.8 1.4 110 chr3R 16215118 intergenic CR45641 + chr3R 16215173 intergenic CR45641 + chr3R 16215228 intergenic CR45641 + chr3R_4_16215001 chr3R_16215001 RAL-808_75b 868 chr3R 16246523 16246551 chr3R 16246598 16246627 5 74 0.0 2.5 1.2 2.3 104 chr3R 16246523 intron tara + chr3R 16246575 intron tara + chr3R 16246627 intron tara + chr3R_5_16245001 chr3R_16245001 RAL-808_75b 869 chr3R 16374293 16374330 chr3R 16374410 16374447 5 115 0.5 2.5 1.5 2.0 154 chr3R 16374293 intergenic ss - chr3R 16374370 intergenic ss - chr3R 16374447 3` UTR ss - chr3R_5_16370001 chr3R_16370001 RAL-808_75b 870 chr3R 16472585 16472600 chr3R 16472654 16472669 7 71 7.0 4.0 5.5 1.1 84 chr3R 16472585 intergenic Gyc-89Da + chr3R 16472627 5` UTR Gyc-89Da + chr3R 16472669 5` UTR Gyc-89Da + chr3R_7_16470001 chr3R_16470001 RAL-808_75b 871 chr3R 17290456 17290468 chr3R 17290533 17290554 4 84 1.0 2.5 1.8 1.4 98 chr3R 17290456 intergenic not near genes chr3R 17290505 intergenic not near genes chr3R 17290554 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-808_75b 872 chr3R 17294683 17294698 chr3R 17295093 17295126 BS 4 417 0.0 2.5 1.2 1.8 443 chr3R 17294683 intergenic not near genes chr3R 17294904 intergenic not near genes chr3R 17295126 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-808_75b 873 chr3R 17346689 17346717 chr3R 17348252 17348271 F-element 6 1560 2.5 3.0 2.8 1.6 1582 chr3R 17346689 intron beat-IIa - chr3R 17347480 intron beat-IIa - chr3R 17348271 intron beat-IIa - chr3R_6_17345001 chr3R_17345001 RAL-808_75b 874 chr3R 17407023 17407030 chr3R 17407110 17407114 5 92 1.0 2.5 1.8 1.8 91 chr3R 17407023 intron CG42798 + chr3R 17407068 5` UTR CG42798 + chr3R 17407114 5` UTR CG42798 + chr3R_5_17405001 chr3R_17405001 RAL-808_75b 875 chr3R 17461217 17461226 chr3R 17461297 17461307 4 81 3.5 2.0 2.8 1.1 90 chr3R 17461217 intergenic not near genes chr3R 17461262 intergenic not near genes chr3R 17461307 intergenic not near genes chr3R_4_17460001 chr3R_17460001 RAL-808_75b 876 chr3R 17554367 17554389 chr3R 17554629 17554648 9 264 4.0 2.5 3.2 2.1 281 chr3R 17554367 intergenic not near genes chr3R 17554508 intergenic not near genes chr3R 17554648 intergenic not near genes chr3R_9_17550001 chr3R_17550001 RAL-808_75b 877 chr3R 17591308 17591322 chr3R 17591723 17591747 F-element 5 422 3.5 3.5 3.5 1.1 439 chr3R 17591308 intergenic not near genes chr3R 17591528 intergenic not near genes chr3R 17591747 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-808_75b 878 chr3R 17913133 17913148 chr3R 17913222 17913228 6 89 2.5 1.0 1.8 2.1 95 chr3R 17913133 intron Rim - chr3R 17913180 intron Rim - chr3R 17913228 intron Rim - chr3R_6_17910001 chr3R_17910001 RAL-808_75b 879 chr3R 17925856 17925883 chr3R 17927322 17927345 hobo 5 1461 5.5 7.5 6.5 0.7 1489 chr3R 17925856 intron cpo + chr3R 17926600 intron cpo + chr3R 17927345 intron cpo + chr3R_5_17925001 chr3R_17925001 RAL-808_75b 880 chr3R 17983210 17983244 chr3R 17983286 17983311 6 67 3.5 1.5 2.5 1.7 101 chr3R 17983210 intron cpo + chr3R 17983260 intron cpo + chr3R 17983311 intron cpo + chr3R_6_17980001 chr3R_17980001 RAL-808_75b 881 chr3R 18032785 18032801 chr3R 18040458 18040474 opus 5 7672 0.0 1.0 0.5 3.3 7689 chr3R 18032785 intergenic not near genes chr3R 18036630 intergenic not near genes chr3R 18040474 intergenic not near genes chr3R_5_18035001 chr3R_18035001 RAL-808_75b 882 chr3R 18041753 18041775 chr3R 18041830 18041852 5 76 0.0 1.0 0.5 3.3 99 chr3R 18041753 intergenic not near genes chr3R 18041802 intergenic not near genes chr3R 18041852 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-808_75b 883 chr3R 18439298 18439330 chr3R 18439390 18439394 15 86 5.5 4.5 5.0 2.5 96 chr3R 18439298 intron fru - chr3R 18439346 intron fru - chr3R 18439394 intron fru - chr3R_15_18435001 chr3R_18435001 RAL-808_75b 884 chr3R 18537235 18537266 chr3R 18537319 18537319 4 74 1.5 2.0 1.8 1.4 84 chr3R 18537235 intron fru - chr3R 18537277 intron fru - chr3R 18537319 intron fru - chr3R_4_18535001 chr3R_18535001 RAL-808_75b 885 chr3R 18606502 18606534 chr3R 18610733 18610763 F-element 10 4222 1.5 1.5 1.5 4.0 4261 chr3R 18606502 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610763 intron,intron qin +,CG14304 - chr3R_10_18605001 chr3R_18605001 RAL-808_75b 886 chr3R 18618275 18618294 chr3R 18618354 18618369 5 78 1.0 0.5 0.8 2.8 94 chr3R 18618275 intron,intron qin +,CG14304 - chr3R 18618322 intron,intron qin +,CG14304 - chr3R 18618369 intron,intron qin +,CG14304 - chr3R_5_18615001 chr3R_18615001 RAL-808_75b 887 chr3R 18669871 18669890 chr3R 18669990 18670010 4 118 4.0 3.5 3.8 0.8 139 chr3R 18669871 intron CG7702 + chr3R 18669940 intron CG7702 + chr3R 18670010 intron CG7702 + chr3R_4_18665001 chr3R_18665001 RAL-808_75b 888 chr3R 18670394 18670401 chr3R 18670487 18670494 4 93 9.0 4.5 6.8 0.5 100 chr3R 18670394 intron CG7702 + chr3R 18670444 intron CG7702 + chr3R 18670494 intron CG7702 + chr3R_4_18670001 chr3R_18670001 RAL-808_75b 889 chr3R 18730029 18730038 chr3R 18730104 18730104 5 74 1.5 5.5 3.5 1.1 75 chr3R 18730029 intron Cha + chr3R 18730066 intron Cha + chr3R 18730104 intron Cha + chr3R_5_18730001 chr3R_18730001 RAL-808_75b 890 chr3R 18785885 18785895 chr3R 18785962 18785972 4 77 6.0 2.5 4.2 0.8 87 chr3R 18785885 intron CG7720 - chr3R 18785928 intron CG7720 - chr3R 18785972 intron CG7720 - chr3R_4_18785001 chr3R_18785001 RAL-808_75b 891 chr3R 18791496 18791525 chr3R 18791575 18791580 4 69 2.0 1.5 1.8 1.4 84 chr3R 18791496 intron CG7720 - chr3R 18791538 intron CG7720 - chr3R 18791580 intron CG7720 - chr3R_4_18790001 chr3R_18790001 RAL-808_75b 892 chr3R 18826170 18826191 chr3R 18826271 18826289 7 99 1.5 2.0 1.8 2.5 119 chr3R 18826170 intron CG18208 - chr3R 18826230 intron CG18208 - chr3R 18826289 intron CG18208 - chr3R_7_18825001 chr3R_18825001 RAL-808_75b 893 chr3R 18941168 18941179 chr3R 18941231 18941235 7 67 4.5 2.5 3.5 1.6 67 chr3R 18941168 intron CG42613 + chr3R 18941202 intron CG42613 + chr3R 18941235 intron CG42613 + chr3R_7_18940001 chr3R_18940001 RAL-808_75b 894 chr3R 19140273 19140300 chr3R 19140714 19140717 10 439 0.0 2.0 1.0 5.0 444 chr3R 19140273 3` UTR Ppcs - chr3R 19140495 3` UTR Ppcs - chr3R 19140717 3` UTR Ppcs - chr3R_10_19140001 chr3R_19140001 RAL-808_75b 895 chr3R 19165919 19165953 chr3R 19166029 19166048 10 104 5.5 4.0 4.8 1.7 129 chr3R 19165919 intron sqz + chr3R 19165984 intron sqz + chr3R 19166048 intron sqz + chr3R_10_19165001 chr3R_19165001 RAL-808_75b 896 chr3R 19201274 19201305 chr3R 19201361 19201390 7 86 2.5 1.5 2.0 2.3 116 chr3R 19201274 intergenic CG31475 + chr3R 19201332 intergenic CG31475 + chr3R 19201390 intergenic CG31475 + chr3R_7_19200001 chr3R_19200001 RAL-808_75b 897 chr3R 19340412 19340430 chr3R 19340477 19340478 5 65 2.5 2.0 2.2 1.6 66 chr3R 19340412 intergenic not near genes chr3R 19340445 intergenic not near genes chr3R 19340478 intergenic not near genes chr3R_5_19340001 chr3R_19340001 RAL-808_75b 898 chr3R 19475241 19475272 chr3R 19475770 19475801 9 524 1.0 3.5 2.2 2.8 560 chr3R 19475241 intron Dys + chr3R 19475521 intron Dys + chr3R 19475801 intron Dys + chr3R_9_19475001 chr3R_19475001 RAL-808_75b 899 chr3R 19544792 19544824 chr3R 19544874 19544906 10 77 2.0 3.5 2.8 2.6 114 chr3R 19544792 intron Dys + chr3R 19544849 intron Dys + chr3R 19544906 intron Dys + chr3R_10_19540001 chr3R_19540001 RAL-808_75b 900 chr3R 19611996 19612010 chr3R 19616029 19616059 6 4038 17.0 10.0 13.5 0.4 4063 chr3R 19611996 exon CG17752 + chr3R 19614028 exon CG16727 + chr3R 19616059 3` UTR CG6231 - chr3R_6_19610001 chr3R_19610001 RAL-808_75b 901 chr3R 19827527 19827558 chr3R 19827612 19827623 4 80 0.5 2.0 1.2 1.8 96 chr3R 19827527 intron bnl - chr3R 19827575 intron bnl - chr3R 19827623 intron bnl - chr3R_4_19825001 chr3R_19825001 RAL-808_75b 902 chr3R 19950053 19950062 chr3R 19950110 19950111 5 65 2.0 4.5 3.2 1.2 58 chr3R 19950053 intron Hs6st - chr3R 19950082 intron Hs6st - chr3R 19950111 intron Hs6st - chr3R_5_19950001 chr3R_19950001 RAL-808_75b 903 chr3R 20008826 20008845 chr3R 20008901 20008917 4 77 1.5 3.5 2.5 1.1 91 chr3R 20008826 intergenic MED25 +,Hs6st - chr3R 20008872 intergenic MED25 +,Hs6st - chr3R 20008917 intergenic MED25 +,Hs6st - chr3R_4_20005001 chr3R_20005001 RAL-808_75b 904 chr3R 20020159 20020181 chr3R 20020290 20020290 4 124 1.5 2.5 2.0 1.3 131 chr3R 20020159 intron CG4433 - chr3R 20020224 intron CG4433 - chr3R 20020290 intron CG4433 - chr3R_4_20020001 chr3R_20020001 RAL-808_75b 905 chr3R 20076947 20076978 chr3R 20077023 20077054 7 71 3.0 4.0 3.5 1.6 107 chr3R 20076947 intergenic not near genes chr3R 20077000 intergenic not near genes chr3R 20077054 intergenic not near genes chr3R_7_20075001 chr3R_20075001 RAL-808_75b 906 chr3R 20096313 20096328 chr3R 20096726 20096743 4 413 1.0 2.5 1.8 1.4 430 chr3R 20096313 intergenic not near genes chr3R 20096528 intergenic not near genes chr3R 20096743 intergenic not near genes chr3R_4_20095001 chr3R_20095001 RAL-808_75b 907 chr3R 20156705 20156719 chr3R 20165861 20165867 roo 6 9160 5.0 2.0 3.5 1.3 9162 chr3R 20156705 intergenic not near genes chr3R 20161286 intergenic not near genes chr3R 20165867 intergenic not near genes chr3R_6_20160001 chr3R_20160001 RAL-808_75b 908 chr3R 20175097 20175113 chr3R 20175180 20175186 6 79 1.5 6.0 3.8 1.2 89 chr3R 20175097 intergenic CG5023 + chr3R 20175142 intergenic CG5023 + chr3R 20175186 intergenic CG5023 + chr3R_6_20175001 chr3R_20175001 RAL-808_75b 909 chr3R 20205585 20205593 chr3R 20205681 20205715 4 116 2.5 2.0 2.2 1.2 130 chr3R 20205585 intron Nlg4 + chr3R 20205650 intron Nlg4 + chr3R 20205715 intron Nlg4 + chr3R_4_20205001 chr3R_20205001 RAL-808_75b 910 chr3R 20266515 20266549 chr3R 20272986 20273019 Burdock 7 6464 2.5 3.5 3.0 1.8 6504 chr3R 20266515 intron cic + chr3R 20269767 intron cic + chr3R 20273019 intron cic + chr3R_7_20265001 chr3R_20265001 RAL-808_75b 911 chr3R 20282289 20282306 chr3R 20282365 20282370 4 73 0.0 3.0 1.5 1.6 81 chr3R 20282289 intron cic + chr3R 20282330 intron cic + chr3R 20282370 intron cic + chr3R_4_20280001 chr3R_20280001 RAL-808_75b 912 chr3R 20432681 20432697 chr3R 20432772 20432798 5 100 5.0 5.5 5.2 0.8 117 chr3R 20432681 intron Gfrl - chr3R 20432740 intron Gfrl - chr3R 20432798 intron Gfrl - chr3R_5_20430001 chr3R_20430001 RAL-808_75b 913 chr3R 20467080 20467111 chr3R 20467152 20467174 10 59 1.0 3.5 2.2 3.1 94 chr3R 20467080 intron Gfrl - chr3R 20467127 intron Gfrl - chr3R 20467174 intron Gfrl - chr3R_10_20465001 chr3R_20465001 RAL-808_75b 914 chr3R 20585934 20585945 chr3R 20586019 20586030 5 83 1.5 2.0 1.8 1.8 96 chr3R 20585934 intergenic CG16953 -,Sep2 - chr3R 20585982 intergenic Sep2 -,CG16953 - chr3R 20586030 intergenic Sep2 -,CG16953 - chr3R_5_20585001 chr3R_20585001 RAL-808_75b 915 chr3R 20684221 20684245 chr3R 20684299 20684323 4 77 0.5 2.5 1.5 1.6 102 chr3R 20684221 intergenic not near genes chr3R 20684272 intergenic not near genes chr3R 20684323 intergenic not near genes chr3R_4_20680001 chr3R_20680001 RAL-808_75b 916 chr3R 20703480 20703513 chr3R 20703874 20703882 6 390 1.0 1.5 1.2 2.7 402 chr3R 20703480 intron Oamb - chr3R 20703681 intron Oamb - chr3R 20703882 intron Oamb - chr3R_6_20700001 chr3R_20700001 RAL-808_75b 917 chr3R 20769582 20769610 chr3R 20769705 20769710 5 120 1.5 1.0 1.2 2.3 128 chr3R 20769582 intron Syp + chr3R 20769646 intron Syp + chr3R 20769710 intron Syp + chr3R_5_20765001 chr3R_20765001 RAL-808_75b 918 chr3R 20815088 20815093 chr3R 20815176 20815177 6 89 7.0 4.5 5.8 0.9 89 chr3R 20815088 exon Fancd2 - chr3R 20815132 intron Fancd2 - chr3R 20815177 intron Fancd2 - chr3R_6_20815001 chr3R_20815001 RAL-808_75b 919 chr3R 20815098 20815112 chr3R 20815173 20815202 6 89 1.0 4.0 2.5 1.7 104 chr3R 20815098 intron Fancd2 - chr3R 20815150 intron Fancd2 - chr3R 20815202 exon Fancd2 - chr3R_6_20815001 chr3R_20815001 RAL-808_75b 920 chr3R 20870255 20870284 chr3R 20870337 20870362 4 81 3.0 5.0 4.0 0.8 107 chr3R 20870255 intergenic not near genes chr3R 20870308 intergenic not near genes chr3R 20870362 intergenic not near genes chr3R_4_20870001 chr3R_20870001 RAL-808_75b 921 chr3R 20979499 20979515 chr3R 20979563 20979591 4 73 2.5 2.0 2.2 1.2 92 chr3R 20979499 intron Calx + chr3R 20979545 intron Calx + chr3R 20979591 intron Calx + chr3R_4_20975001 chr3R_20975001 RAL-808_75b 922 chr3R 21141687 21141699 chr3R 21150158 21150159 Tirant 4 8468 2.5 3.5 3.0 1.0 8472 chr3R 21141687 intron SNF4Agamma + chr3R 21145923 intron SNF4Agamma + chr3R 21150159 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-808_75b 923 chr3R 21163250 21163270 chr3R 21163326 21163348 7 75 1.5 4.5 3.0 1.8 98 chr3R 21163250 intron SNF4Agamma + chr3R 21163299 intron SNF4Agamma + chr3R 21163348 intron SNF4Agamma + chr3R_7_21160001 chr3R_21160001 RAL-808_75b 924 chr3R 21240455 21240479 chr3R 21240538 21240571 7 83 3.0 5.0 4.0 1.4 116 chr3R 21240455 intergenic not near genes chr3R 21240513 intergenic not near genes chr3R 21240571 intergenic not near genes chr3R_7_21240001 chr3R_21240001 RAL-808_75b 925 chr3R 21322978 21322989 chr3R 21323057 21323068 4 79 2.0 0.0 1.0 2.0 90 chr3R 21322978 intron CG16791 - chr3R 21323023 intron CG16791 - chr3R 21323068 intron CG16791 - chr3R_4_21320001 chr3R_21320001 RAL-808_75b 926 chr3R 21481391 21481394 chr3R 21481482 21481485 4 91 5.5 0.0 2.8 1.1 94 chr3R 21481391 intergenic not near genes chr3R 21481438 intergenic not near genes chr3R 21481485 intergenic not near genes chr3R_4_21480001 chr3R_21480001 RAL-808_75b 927 chr3R 21519986 21520138 chr3R 21520087 21520218 4 96 2.0 1.5 1.8 1.4 232 chr3R 21519986 intergenic not near genes chr3R 21520102 intergenic not near genes chr3R 21520218 intergenic not near genes chr3R_4_21520001 chr3R_21520001 RAL-808_75b 928 chr3R 21545611 21545635 chr3R 21545677 21545709 6 72 1.5 3.0 2.2 1.9 98 chr3R 21545611 intergenic not near genes chr3R 21545660 intergenic not near genes chr3R 21545709 intergenic not near genes chr3R_6_21545001 chr3R_21545001 RAL-808_75b 929 chr3R 21600525 21600543 chr3R 21600972 21600985 4 444 6.0 1.5 3.8 0.8 460 chr3R 21600525 intron InR - chr3R 21600755 intron InR - chr3R 21600985 intron InR - chr3R_4_21600001 chr3R_21600001 RAL-808_75b 930 chr3R 21761121 21761147 chr3R 21768513 21768525 mdg1 7 7380 2.5 5.5 4.0 1.4 7404 chr3R 21761121 exon CG42335 + chr3R 21764823 intron CG42335 + chr3R 21768525 exon CG42335 + chr3R_7_21760001 chr3R_21760001 RAL-808_75b 931 chr3R 21883976 21884003 chr3R 21884053 21884080 8 73 2.0 5.5 3.8 1.7 104 chr3R 21883976 intron,3` UTR,3` UTR CR45046 -,CG31465 +,fit - chr3R 21884028 intron,3` UTR CR45046 -,fit - chr3R 21884080 3` UTR,exon CR45046 -,fit - chr3R_8_21880001 chr3R_21880001 RAL-808_75b 932 chr3R 19457915 19457918 chr3R 21907534 21907534 6 2449618 5.0 19.5 12.2 0.5 2449619 chr3R 19457915 3` UTR CG31221 + chr3R 20682724 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_6_20680001 chr3R_20680001 RAL-808_75b 933 chr3R 21337429 21337429 chr3R 21907534 21907534 5 570105 12.0 19.5 15.8 0.3 570105 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_5_21620001 chr3R_21620001 RAL-808_75b 934 chr3R 21907534 21907534 chr3R 28831801 28831802 13 6924268 22.5 17.0 19.8 0.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_13_25365001 chr3R_25365001 RAL-808_75b 935 chr3R 17389054 17389054 chr3R 21907535 21907535 5 4518481 6.0 19.5 12.8 0.4 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_5_19645001 chr3R_19645001 RAL-808_75b 936 chr3R 20177845 20177845 chr3R 21907535 21907535 6 1729690 3.0 19.5 11.2 0.5 1729690 chr3R 20177845 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907535 intergenic CG6678 + chr3R_6_21040001 chr3R_21040001 RAL-808_75b 937 chr3R 21907535 21907535 chr3R 28831801 28831804 18 6924267 22.5 17.0 19.8 0.9 6924269 chr3R 21907535 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831804 intron WASp - chr3R_18_25365001 chr3R_25365001 RAL-808_75b 938 chr3R 21907535 21907535 chr3R 29013339 29013340 4 7105805 22.5 17.0 19.8 0.2 7105805 chr3R 21907535 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-808_75b 939 chr3R 21337429 21337429 chr3R 21907536 21907536 4 570107 12.0 19.5 15.8 0.2 570107 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907536 intergenic CG6678 + chr3R_4_21620001 chr3R_21620001 RAL-808_75b 940 chr3R 21907536 21907536 chr3R 28831801 28831804 27 6924266 22.5 17.0 19.8 1.3 6924268 chr3R 21907536 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831804 intron WASp - chr3R_27_25365001 chr3R_25365001 RAL-808_75b 941 chr3R 21985231 21985261 chr3R 21985335 21985366 4 103 2.0 1.5 1.8 1.4 135 chr3R 21985231 intron Eip93F + chr3R 21985298 intron Eip93F + chr3R 21985366 intron Eip93F + chr3R_4_21985001 chr3R_21985001 RAL-808_75b 942 chr3R 22234682 22234712 chr3R 22236001 22236028 pogo 7 1310 2.0 2.5 2.2 2.2 1346 chr3R 22234682 intron SKIP + chr3R 22235355 intron SKIP + chr3R 22236028 intron SKIP + chr3R_7_22235001 chr3R_22235001 RAL-808_75b 943 chr3R 22343811 22343825 chr3R 22344353 22344373 5 545 2.5 3.5 3.0 1.2 562 chr3R 22343811 intergenic not near genes chr3R 22344092 intergenic not near genes chr3R 22344373 intergenic not near genes chr3R_5_22340001 chr3R_22340001 RAL-808_75b 944 chr3R 22360227 22360257 chr3R 22360354 22360383 7 127 5.5 0.5 3.0 1.8 156 chr3R 22360227 3` UTR Sar1 + chr3R 22360305 3` UTR Sar1 + chr3R 22360383 3` UTR Sar1 + chr3R_7_22360001 chr3R_22360001 RAL-808_75b 945 chr3R 22591667 22591699 chr3R 22591745 22591751 6 74 1.0 2.5 1.8 2.1 84 chr3R 22591667 intron Efa6 + chr3R 22591709 intron Efa6 + chr3R 22591751 intron Efa6 + chr3R_6_22590001 chr3R_22590001 RAL-808_75b 946 chr3R 22842997 22843026 chr3R 22843152 22843154 6 145 3.0 0.0 1.5 2.4 157 chr3R 22842997 intergenic not near genes chr3R 22843076 intergenic not near genes chr3R 22843154 intergenic not near genes chr3R_6_22840001 chr3R_22840001 RAL-808_75b 947 chr3R 22867454 22867464 chr3R 22867576 22867594 5 127 3.5 4.5 4.0 1.0 140 chr3R 22867454 intergenic not near genes chr3R 22867524 intergenic not near genes chr3R 22867594 intergenic not near genes chr3R_5_22865001 chr3R_22865001 RAL-808_75b 948 chr3R 22925904 22925931 chr3R 22926014 22926034 10 107 4.0 3.5 3.8 2.1 130 chr3R 22925904 intron klg + chr3R 22925969 intron klg + chr3R 22926034 intron klg + chr3R_10_22925001 chr3R_22925001 RAL-808_75b 949 chr3R 22973645 22973648 chr3R 22973729 22973740 5 90 6.5 5.5 6.0 0.7 95 chr3R 22973645 intergenic not near genes chr3R 22973692 intergenic not near genes chr3R 22973740 intergenic not near genes chr3R_5_22970001 chr3R_22970001 RAL-808_75b 950 chr3R 23064199 23064203 chr3R 23064282 23064312 4 102 3.5 2.5 3.0 1.0 113 chr3R 23064199 exon CG17111 - chr3R 23064256 intron CG17111 - chr3R 23064312 exon CG17111 - chr3R_4_23060001 chr3R_23060001 RAL-808_75b 951 chr3R 23260962 23260990 chr3R 23261044 23261049 5 74 0.5 2.0 1.2 2.3 87 chr3R 23260962 3` UTR orb - chr3R 23261006 3` UTR orb - chr3R 23261049 3` UTR orb - chr3R_5_23260001 chr3R_23260001 RAL-808_75b 952 chr3R 23291251 23291272 chr3R 23291335 23291358 4 86 7.5 3.5 5.5 0.6 107 chr3R 23291251 3` UTR pnt - chr3R 23291304 3` UTR pnt - chr3R 23291358 3` UTR pnt - chr3R_4_23290001 chr3R_23290001 RAL-808_75b 953 chr3R 23335452 23335459 chr3R 23335523 23335533 4 74 3.0 3.5 3.2 1.0 81 chr3R 23335452 intron pnt - chr3R 23335492 intron pnt - chr3R 23335533 intron pnt - chr3R_4_23335001 chr3R_23335001 RAL-808_75b 954 chr3R 23421997 23422004 chr3R 23422082 23422084 4 84 4.0 6.5 5.2 0.6 87 chr3R 23421997 intron CG4374 - chr3R 23422040 intron CG4374 - chr3R 23422084 intron CG4374 - chr3R_4_23420001 chr3R_23420001 RAL-808_75b 955 chr3R 23453687 23453708 chr3R 23453764 23453786 8 77 2.0 2.5 2.2 2.5 99 chr3R 23453687 intron CG4374 - chr3R 23453736 intron CG4374 - chr3R 23453786 intron CG4374 - chr3R_8_23450001 chr3R_23450001 RAL-808_75b 956 chr3R 23558402 23558428 chr3R 23560181 23560195 Bari1 8 1775 0.5 1.5 1.0 4.0 1793 chr3R 23558402 intron beat-IV + chr3R 23559298 intron beat-IV + chr3R 23560195 intron beat-IV + chr3R_8_23555001 chr3R_23555001 RAL-808_75b 957 chr3R 23650247 23650276 chr3R 23650371 23650400 5 114 1.5 0.5 1.0 2.5 153 chr3R 23650247 intron CG31145 - chr3R 23650324 intron CG31145 - chr3R 23650400 intron CG31145 - chr3R_5_23650001 chr3R_23650001 RAL-808_75b 958 chr3R 23733810 23733844 chr3R 23734023 23734040 11 203 6.5 3.0 4.8 1.9 230 chr3R 23733810 5` UTR Hmgcr + chr3R 23733925 intron Hmgcr + chr3R 23734040 intron Hmgcr + chr3R_11_23730001 chr3R_23730001 RAL-808_75b 959 chr3R 23944919 23944928 chr3R 23944995 23945013 4 80 3.0 4.5 3.8 0.8 94 chr3R 23944919 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945013 intron CG12268 - chr3R_4_23940001 chr3R_23940001 RAL-808_75b 960 chr3R 24072083 24072114 chr3R 24072521 24072552 jockey 14 431 5.0 7.0 6.0 2.0 469 chr3R 24072083 intron 4EHP - chr3R 24072318 intron 4EHP - chr3R 24072552 intron 4EHP - chr3R_14_24070001 chr3R_24070001 RAL-808_75b 961 chr3R 24076936 24076947 chr3R 24078394 24078402 hobo 6 1463 4.5 10.0 7.2 0.7 1466 chr3R 24076936 intron 4EHP - chr3R 24077669 intron 4EHP - chr3R 24078402 intron 4EHP - chr3R_6_24075001 chr3R_24075001 RAL-808_75b 962 chr3R 24199741 24199755 chr3R 24199821 24199835 4 80 5.0 1.5 3.2 1.0 94 chr3R 24199741 intron twin - chr3R 24199788 intron twin - chr3R 24199835 intron twin - chr3R_4_24195001 chr3R_24195001 RAL-808_75b 963 chr3R 24199758 24199773 chr3R 24199819 24199837 8 69 3.5 1.5 2.5 2.3 79 chr3R 24199758 intron twin - chr3R 24199798 intron twin - chr3R 24199837 intron twin - chr3R_8_24195001 chr3R_24195001 RAL-808_75b 964 chr3R 24207222 24207244 chr3R 24212297 24212320 flea 4 5072 3.5 5.5 4.5 0.7 5098 chr3R 24207222 intron twin - chr3R 24209771 intron twin - chr3R 24212320 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-808_75b 965 chr3R 24236470 24236494 chr3R 24236547 24236550 7 72 4.0 4.0 4.0 1.4 80 chr3R 24236470 exon mask + chr3R 24236510 exon mask + chr3R 24236550 intron mask + chr3R_7_24235001 chr3R_24235001 RAL-808_75b 966 chr3R 24426297 24426315 chr3R 24426541 24426572 6 250 3.5 3.0 3.2 1.4 275 chr3R 24426297 intron nAChRalpha1 - chr3R 24426434 intron nAChRalpha1 - chr3R 24426572 intron nAChRalpha1 - chr3R_6_24425001 chr3R_24425001 RAL-808_75b 967 chr3R 24493275 24493310 chr3R 24493504 24493539 BS 12 226 2.0 1.5 1.8 4.3 264 chr3R 24493275 intergenic not near genes chr3R 24493407 intergenic not near genes chr3R 24493539 intergenic not near genes chr3R_12_24490001 chr3R_24490001 RAL-808_75b 968 chr3R 24670078 24670197 chr3R 24670178 24670282 5 88 0.0 0.0 0.0 5.0 204 chr3R 24670078 intron slo + chr3R 24670180 intron slo + chr3R 24670282 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-808_75b 969 chr3R 24671218 24671247 chr3R 24671295 24671303 5 63 6.5 2.5 4.5 0.9 85 chr3R 24671218 intron slo + chr3R 24671260 intron slo + chr3R 24671303 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-808_75b 970 chr3R 24730100 24730120 chr3R 24732468 24732498 Doc 9 2368 4.0 2.0 3.0 2.2 2398 chr3R 24730100 intron tok + chr3R 24731299 intron tok + chr3R 24732498 intron tok + chr3R_9_24730001 chr3R_24730001 RAL-808_75b 971 chr3R 24785085 24785097 chr3R 24785161 24785173 5 76 4.0 4.5 4.2 1.0 88 chr3R 24785085 3` UTR CG5805 - chr3R 24785129 3` UTR CG5805 - chr3R 24785173 3` UTR CG5805 - chr3R_5_24785001 chr3R_24785001 RAL-808_75b 972 chr3R 24785106 24785112 chr3R 24785159 24785172 5 62 2.5 4.5 3.5 1.1 66 chr3R 24785106 3` UTR CG5805 - chr3R 24785139 3` UTR CG5805 - chr3R 24785172 3` UTR CG5805 - chr3R_5_24785001 chr3R_24785001 RAL-808_75b 973 chr3R 24927126 24927164 chr3R 24931917 24931922 Doc 9 4777 1.5 2.0 1.8 3.2 4796 chr3R 24927126 intergenic Trf4-2 + chr3R 24929524 intergenic not near genes chr3R 24931922 intergenic CG11771 + chr3R_9_24925001 chr3R_24925001 RAL-808_75b 974 chr3R 24974915 24974931 chr3R 24974993 24975004 6 78 2.5 6.5 4.5 1.1 89 chr3R 24974915 intergenic not near genes chr3R 24974960 intergenic not near genes chr3R 24975004 intergenic not near genes chr3R_6_24970001 chr3R_24970001 RAL-808_75b 975 chr3R 25004900 25004921 chr3R 25004983 25005004 6 83 2.0 4.0 3.0 1.5 104 chr3R 25004900 intron tnc + chr3R 25004952 intron tnc + chr3R 25005004 intron tnc + chr3R_6_25000001 chr3R_25000001 RAL-808_75b 976 chr3R 25027536 25027569 chr3R 25027749 25027766 9 210 1.0 3.5 2.2 2.8 230 chr3R 25027536 intron Hr96 + chr3R 25027651 intron Hr96 + chr3R 25027766 intron Hr96 + chr3R_9_25025001 chr3R_25025001 RAL-808_75b 977 chr3R 25320388 25320394 chr3R 25320474 25320480 4 86 2.0 1.5 1.8 1.4 92 chr3R 25320388 intergenic CG10560 - chr3R 25320434 intergenic CG10560 - chr3R 25320480 intergenic CG10560 - chr3R_4_25320001 chr3R_25320001 RAL-808_75b 978 chr3R 25626718 25626730 chr3R 25627384 25627405 6 668 22.5 24.0 23.2 0.2 687 chr3R 25626718 intron Ssadh - chr3R 25627062 intergenic Ssadh - chr3R 25627405 intergenic Ssadh - chr3R_6_25625001 chr3R_25625001 RAL-808_75b 979 chr3R 25689127 25689162 chr3R 25689235 25689270 14 102 1.5 3.0 2.2 4.4 143 chr3R 25689127 intergenic not near genes chr3R 25689198 intergenic not near genes chr3R 25689270 intergenic not near genes chr3R_14_25685001 chr3R_25685001 RAL-808_75b 980 chr3R 25720821 25720835 chr3R 25720896 25720917 5 82 0.0 5.0 2.5 1.4 96 chr3R 25720821 intron LpR2 - chr3R 25720869 intron LpR2 - chr3R 25720917 intron LpR2 - chr3R_5_25720001 chr3R_25720001 RAL-808_75b 981 chr3R 25755194 25755215 chr3R 25756054 25756073 4 860 6.0 4.5 5.2 0.6 879 chr3R 25755194 intron LpR1 - chr3R 25755634 intron LpR1 - chr3R 25756073 intron LpR1 - chr3R_4_25755001 chr3R_25755001 RAL-808_75b 982 chr3R 25755224 25755226 chr3R 25756053 25756082 6 844 3.5 3.5 3.5 1.3 858 chr3R 25755224 intron LpR1 - chr3R 25755653 intron LpR1 - chr3R 25756082 intron LpR1 - chr3R_6_25755001 chr3R_25755001 RAL-808_75b 983 chr3R 25782026 25782034 chr3R 25782102 25782110 4 76 8.5 5.5 7.0 0.5 84 chr3R 25782026 intergenic not near genes chr3R 25782068 intergenic not near genes chr3R 25782110 intergenic not near genes chr3R_4_25780001 chr3R_25780001 RAL-808_75b 984 chr3R 25782040 25782049 chr3R 25782093 25782109 6 60 4.0 3.0 3.5 1.3 69 chr3R 25782040 intergenic not near genes chr3R 25782074 intergenic not near genes chr3R 25782109 intergenic not near genes chr3R_6_25780001 chr3R_25780001 RAL-808_75b 985 chr3R 25832707 25832716 chr3R 25841881 25841893 roo 5 9177 4.5 6.0 5.2 0.8 9186 chr3R 25832707 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841893 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-808_75b 986 chr3R 25843643 25843663 chr3R 25843772 25843774 4 124 1.0 1.5 1.2 1.8 131 chr3R 25843643 intergenic CR45653 + chr3R 25843708 intergenic CR45653 + chr3R 25843774 intergenic CR45653 + chr3R_4_25840001 chr3R_25840001 RAL-808_75b 987 chr3R 26121966 26121980 chr3R 26122046 26122046 7 83 2.0 2.5 2.2 2.2 80 chr3R 26121966 intron CG31324 + chr3R 26122006 intron CG31324 + chr3R 26122046 intron CG31324 + chr3R_7_26120001 chr3R_26120001 RAL-808_75b 988 chr3R 26292104 26292122 chr3R 26292184 26292188 4 76 3.0 0.0 1.5 1.6 84 chr3R 26292104 intergenic not near genes chr3R 26292146 intergenic not near genes chr3R 26292188 intergenic not near genes chr3R_4_26290001 chr3R_26290001 RAL-808_75b 989 chr3R 26294716 26294750 chr3R 26294794 26294828 8 73 3.5 5.0 4.2 1.5 112 chr3R 26294716 intergenic not near genes chr3R 26294772 intergenic not near genes chr3R 26294828 intergenic not near genes chr3R_8_26290001 chr3R_26290001 RAL-808_75b 990 chr3R 26374839 26374857 chr3R 26374940 26374959 4 102 1.0 1.0 1.0 2.0 120 chr3R 26374839 intergenic not near genes chr3R 26374899 intergenic not near genes chr3R 26374959 intergenic not near genes chr3R_4_26370001 chr3R_26370001 RAL-808_75b 991 chr3R 26409513 26409521 chr3R 26409788 26409812 5 285 5.0 2.5 3.8 1.0 299 chr3R 26409513 intergenic not near genes chr3R 26409662 intergenic not near genes chr3R 26409812 intergenic not near genes chr3R_5_26405001 chr3R_26405001 RAL-808_75b 992 chr3R 26510260 26510282 chr3R 26510363 26510389 4 102 1.0 3.0 2.0 1.3 129 chr3R 26510260 intron plum - chr3R 26510324 intron plum - chr3R 26510389 intron plum - chr3R_4_26510001 chr3R_26510001 RAL-808_75b 993 chr3R 26558345 26558355 chr3R 26565643 26565660 Stalker4 5 7305 4.5 3.0 3.8 1.0 7315 chr3R 26558345 intron scrib + chr3R 26562002 intron scrib + chr3R 26565660 intron scrib + chr3R_5_26560001 chr3R_26560001 RAL-808_75b 994 chr3R 26575027 26575039 chr3R 26575084 26575117 5 65 3.5 4.5 4.0 1.0 90 chr3R 26575027 exon scrib + chr3R 26575072 intron scrib + chr3R 26575117 intron scrib + chr3R_5_26575001 chr3R_26575001 RAL-808_75b 995 chr3R 26642746 26642760 chr3R 26643122 26643153 jockey 6 386 5.5 1.5 3.5 1.3 407 chr3R 26642746 intergenic not near genes chr3R 26642950 intergenic not near genes chr3R 26643153 intergenic not near genes chr3R_6_26640001 chr3R_26640001 RAL-808_75b 996 chr3R 26767365 26767397 chr3R 26767443 26767457 10 69 2.5 2.0 2.2 3.1 92 chr3R 26767365 intergenic not near genes chr3R 26767411 intergenic not near genes chr3R 26767457 intergenic not near genes chr3R_10_26765001 chr3R_26765001 RAL-808_75b 997 chr3R 26770241 26770272 chr3R 26770318 26770346 7 74 2.0 2.5 2.2 2.2 105 chr3R 26770241 intergenic CR45563 + chr3R 26770294 intergenic CR45563 + chr3R 26770346 intergenic not near genes chr3R_7_26770001 chr3R_26770001 RAL-808_75b 998 chr3R 26781791 26781804 chr3R 26781849 26781878 12 65 3.5 4.5 4.0 2.4 87 chr3R 26781791 intergenic not near genes chr3R 26781834 intergenic not near genes chr3R 26781878 intergenic not near genes chr3R_12_26780001 chr3R_26780001 RAL-808_75b 999 chr3R 27140519 27140522 chr3R 27148129 27148132 412 4 7609 13.5 4.5 9.0 0.4 7613 chr3R 27140519 intron CG6051 - chr3R 27144326 intron CG6051 - chr3R 27148132 intron CG6051 - chr3R_4_27140001 chr3R_27140001 RAL-808_75b 1000 chr3R 27140523 27140544 chr3R 27148123 27148138 412 9 7598 8.0 4.0 6.0 1.3 7615 chr3R 27140523 intron CG6051 - chr3R 27144330 intron CG6051 - chr3R 27148138 intron CG6051 - chr3R_9_27140001 chr3R_27140001 RAL-808_75b 1001 chr3R 27315993 27316012 chr3R 27316068 27316088 5 76 4.0 1.5 2.8 1.3 95 chr3R 27315993 intron CG3339 - chr3R 27316040 intron CG3339 - chr3R 27316088 exon CG3339 - chr3R_5_27315001 chr3R_27315001 RAL-808_75b 1002 chr3R 27342803 27342820 chr3R 27351384 27351398 Tirant 4 8580 2.5 5.0 3.8 0.8 8595 chr3R 27342803 intron CG42534 + chr3R 27347100 intron CG42534 + chr3R 27351398 intron CG42534 + chr3R_4_27345001 chr3R_27345001 RAL-808_75b 1003 chr3R 27385697 27385714 chr3R 27385964 27385985 4 269 4.5 5.0 4.8 0.7 288 chr3R 27385697 intron side - chr3R 27385841 intron side - chr3R 27385985 intron side - chr3R_4_27385001 chr3R_27385001 RAL-808_75b 1004 chr3R 27385717 27385720 chr3R 27385961 27385978 6 254 3.5 3.0 3.2 1.4 261 chr3R 27385717 intron side - chr3R 27385848 intron side - chr3R 27385978 intron side - chr3R_6_27385001 chr3R_27385001 RAL-808_75b 1005 chr3R 27799950 27799962 chr3R 27800019 27800044 9 79 4.0 3.5 3.8 1.9 94 chr3R 27799950 intron CG34353 - chr3R 27799997 intron CG34353 - chr3R 27800044 intron CG34353 - chr3R_9_27795001 chr3R_27795001 RAL-808_75b 1006 chr3R 27856765 27856791 chr3R 27858248 27858250 hopper2 6 1474 4.0 3.5 3.8 1.2 1485 chr3R 27856765 intron CG34353 - chr3R 27857508 intron CG34353 - chr3R 27858250 intron CG34353 - chr3R_6_27855001 chr3R_27855001 RAL-808_75b 1007 chr3R 27875699 27875727 chr3R 27882754 27882782 297 6 7054 6.5 2.0 4.2 1.2 7083 chr3R 27875699 intron CG34353 - chr3R 27879240 intron CG34353 - chr3R 27882782 intron CG34353 - chr3R_6_27875001 chr3R_27875001 RAL-808_75b 1008 chr3R 27903827 27903863 chr3R 27903988 27904024 6 158 1.5 1.5 1.5 2.4 197 chr3R 27903827 intron CG34353 - chr3R 27903926 intron CG34353 - chr3R 27904024 intron CG34353 - chr3R_6_27900001 chr3R_27900001 RAL-808_75b 1009 chr3R 28012958 28012978 chr3R 28013167 28013199 6 216 2.0 3.0 2.5 1.7 241 chr3R 28012958 intergenic not near genes chr3R 28013078 intergenic not near genes chr3R 28013199 intergenic not near genes chr3R_6_28010001 chr3R_28010001 RAL-808_75b 1010 chr3R 28054448 28054475 chr3R 28054517 28054551 11 70 2.0 2.0 2.0 3.7 103 chr3R 28054448 intron CG34362 + chr3R 28054500 intron CG34362 + chr3R 28054551 intron CG34362 + chr3R_11_28050001 chr3R_28050001 RAL-808_75b 1011 chr3R 28068493 28068523 chr3R 28073935 28073965 I-element 5 5441 3.5 3.0 3.2 1.2 5472 chr3R 28068493 intron CG34362 + chr3R 28071229 intron CG34362 + chr3R 28073965 intron CG34362 + chr3R_5_28070001 chr3R_28070001 RAL-808_75b 1012 chr3R 28173672 28173684 chr3R 28181102 28181114 mdg1 4 7430 5.5 2.5 4.0 0.8 7442 chr3R 28173672 intron CG34354 + chr3R 28177393 intron CG34354 + chr3R 28181114 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-808_75b 1013 chr3R 28253344 28253368 chr3R 28255853 28255877 jockey 9 2509 6.0 5.0 5.5 1.4 2533 chr3R 28253344 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255877 intergenic not near genes chr3R_9_28250001 chr3R_28250001 RAL-808_75b 1014 chr3R 28282992 28283019 chr3R 28283618 28283648 7 624 2.0 5.0 3.5 1.6 656 chr3R 28282992 exon CG34436 + chr3R 28283320 exon CG34436 + chr3R 28283648 intergenic CG34437 +,CG34436 + chr3R_7_28280001 chr3R_28280001 RAL-808_75b 1015 chr3R 28302118 28302134 chr3R 28302543 28302569 jockey 5 433 2.5 4.0 3.2 1.2 451 chr3R 28302118 intergenic not near genes chr3R 28302344 intergenic not near genes chr3R 28302569 intergenic not near genes chr3R_5_28300001 chr3R_28300001 RAL-808_75b 1016 chr3R 28332433 28332467 chr3R 28332511 28332524 8 71 2.5 3.0 2.8 2.1 91 chr3R 28332433 intron larp - chr3R 28332478 intron larp - chr3R 28332524 intron larp - chr3R_8_28330001 chr3R_28330001 RAL-808_75b 1017 chr3R 28345656 28345673 chr3R 28345732 28345735 4 71 2.5 4.0 3.2 1.0 79 chr3R 28345656 intergenic Moca-cyp + chr3R 28345696 intergenic not near genes chr3R 28345735 intergenic not near genes chr3R_4_28345001 chr3R_28345001 RAL-808_75b 1018 chr3R 28393698 28393721 chr3R 28393797 28393820 4 96 2.0 1.0 1.5 1.6 122 chr3R 28393698 intergenic not near genes chr3R 28393759 intergenic not near genes chr3R 28393820 intergenic not near genes chr3R_4_28390001 chr3R_28390001 RAL-808_75b 1019 chr3R 28407714 28407739 chr3R 28407789 28407796 6 77 2.0 4.0 3.0 1.5 82 chr3R 28407714 intergenic not near genes chr3R 28407755 intergenic not near genes chr3R 28407796 intergenic not near genes chr3R_6_28405001 chr3R_28405001 RAL-808_75b 1020 chr3R 28445608 28445639 chr3R 28445697 28445728 4 84 3.0 6.0 4.5 0.7 120 chr3R 28445608 intron beat-VI + chr3R 28445668 intron beat-VI + chr3R 28445728 intron beat-VI + chr3R_4_28445001 chr3R_28445001 RAL-808_75b 1021 chr3R 28484353 28484372 chr3R 28486270 28486291 31 1919 45.0 62.5 53.8 0.6 1938 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486291 intergenic CG1894 + chr3R_31_28485001 chr3R_28485001 RAL-808_75b 1022 chr3R 28667883 28667921 chr3R 28668002 28668040 9 114 2.0 2.5 2.2 2.8 157 chr3R 28667883 intergenic not near genes chr3R 28667962 intergenic not near genes chr3R 28668040 intergenic not near genes chr3R_9_28665001 chr3R_28665001 RAL-808_75b 1023 chr3R 28792892 28792903 chr3R 28797977 28797998 jockey 4 5088 2.5 2.5 2.5 1.1 5106 chr3R 28792892 intergenic not near genes chr3R 28795445 intergenic not near genes chr3R 28797998 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-808_75b 1024 chr3R 21907534 21907536 chr3R 28831799 28831802 38 6924266 22.5 16.5 19.5 1.9 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_38_25365001 chr3R_25365001 RAL-808_75b 1025 chr3R 28947968 28947998 chr3R 28948080 28948109 9 109 3.5 4.0 3.8 1.9 141 chr3R 28947968 intron CG14521 - chr3R 28948038 intron CG14521 - chr3R 28948109 intron CG14521 - chr3R_9_28945001 chr3R_28945001 RAL-808_75b 1026 chr3R 29079392 29079412 chr3R 29080755 29080756 NOF 6 1364 1.0 5.5 3.2 1.4 1364 chr3R 29079392 intron CG11873 + chr3R 29080074 intron CG11873 + chr3R 29080756 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RAL-808_75b 1027 chr3R 29213070 29213093 chr3R 29213145 29213157 8 74 2.5 4.5 3.5 1.8 87 chr3R 29213070 intergenic not near genes chr3R 29213114 intergenic not near genes chr3R 29213157 intergenic not near genes chr3R_8_29210001 chr3R_29210001 RAL-808_75b 1028 chr3R 29237255 29237280 chr3R 29239275 29239301 7 2020 6.0 5.5 5.8 1.0 2046 chr3R 29237255 exon CG11951 - chr3R 29238278 intron CG11951 - chr3R 29239301 exon CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-808_75b 1029 chr3R 29249632 29249652 chr3R 29249709 29249739 10 84 1.0 3.5 2.2 3.1 107 chr3R 29249632 intron SP1029 - chr3R 29249686 intron SP1029 - chr3R 29249739 intron SP1029 - chr3R_10_29245001 chr3R_29245001 RAL-808_75b 1030 chr3R 29294918 29294941 chr3R 29294982 29294991 7 69 3.5 7.0 5.2 1.1 73 chr3R 29294918 3` UTR CG14506 - chr3R 29294954 3` UTR CG14506 - chr3R 29294991 3` UTR CG14506 - chr3R_7_29290001 chr3R_29290001 RAL-808_75b 1031 chr3R 29406618 29406637 chr3R 29407903 29407920 jockey 4 1280 4.5 4.0 4.2 0.8 1302 chr3R 29406618 intron Ptp99A + chr3R 29407269 intron Ptp99A + chr3R 29407920 intron Ptp99A + chr3R_4_29405001 chr3R_29405001 RAL-808_75b 1032 chr3R 29406638 29406651 chr3R 29407896 29407927 jockey 6 1269 2.5 3.5 3.0 1.5 1289 chr3R 29406638 intron Ptp99A + chr3R 29407282 intron Ptp99A + chr3R 29407927 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 RAL-808_75b 1033 chr3R 29415615 29415637 chr3R 29415778 29415800 7 167 24.5 17.5 21.0 0.3 185 chr3R 29415615 intron Ptp99A + chr3R 29415708 intron Ptp99A + chr3R 29415800 intron Ptp99A + chr3R_7_29415001 chr3R_29415001 RAL-808_75b 1034 chr3R 29452169 29452186 chr3R 29452231 29452242 4 58 2.0 1.0 1.5 1.6 73 chr3R 29452169 intron Ptp99A + chr3R 29452206 intron Ptp99A + chr3R 29452242 intron Ptp99A + chr3R_4_29450001 chr3R_29450001 RAL-808_75b 1035 chr3R 29472012 29472039 chr3R 29472100 29472131 8 90 2.0 4.0 3.0 2.0 119 chr3R 29472012 intron Ptp99A + chr3R 29472072 intron Ptp99A + chr3R 29472131 intron Ptp99A + chr3R_8_29470001 chr3R_29470001 RAL-808_75b 1036 chr3R 29539438 29539454 chr3R 29539510 29539529 6 72 3.0 0.5 1.8 2.1 91 chr3R 29539438 intergenic not near genes chr3R 29539484 intergenic not near genes chr3R 29539529 intergenic not near genes chr3R_6_29535001 chr3R_29535001 RAL-808_75b 1037 chr3R 29558874 29558906 chr3R 29559011 29559038 7 133 0.5 1.5 1.0 3.5 164 chr3R 29558874 intron Dr + chr3R 29558956 intron Dr + chr3R 29559038 intron Dr + chr3R_7_29555001 chr3R_29555001 RAL-808_75b 1038 chr3R 29627295 29627314 chr3R 29627697 29627717 6 405 3.0 1.5 2.2 1.9 422 chr3R 29627295 intergenic not near genes chr3R 29627506 intergenic not near genes chr3R 29627717 intergenic not near genes chr3R_6_29625001 chr3R_29625001 RAL-808_75b 1039 chr3R 29655662 29655685 chr3R 29655731 29655734 6 72 2.0 2.5 2.2 1.9 72 chr3R 29655662 intron Dop1R2 - chr3R 29655698 intron Dop1R2 - chr3R 29655734 intron Dop1R2 - chr3R_6_29655001 chr3R_29655001 RAL-808_75b 1040 chr3R 29708568 29708590 chr3R 29708636 29708668 5 72 3.0 4.0 3.5 1.1 100 chr3R 29708568 intergenic not near genes chr3R 29708618 intergenic not near genes chr3R 29708668 intergenic not near genes chr3R_5_29705001 chr3R_29705001 RAL-808_75b 1041 chr3R 29882028 29882051 chr3R 29891185 29891205 roo 9 9155 1.0 5.5 3.2 2.1 9177 chr3R 29882028 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891205 intron CG31038 + chr3R_9_29885001 chr3R_29885001 RAL-808_75b 1042 chr3R 29980824 29980834 chr3R 29980899 29980908 4 76 3.5 1.0 2.2 1.2 84 chr3R 29980824 intergenic not near genes chr3R 29980866 intergenic not near genes chr3R 29980908 intergenic not near genes chr3R_4_29980001 chr3R_29980001 RAL-808_75b 1043 chr3R 30032162 30032194 chr3R 30032240 30032247 7 67 1.0 0.5 0.8 3.9 85 chr3R 30032162 intron Axn + chr3R 30032204 intron Axn + chr3R 30032247 intron Axn + chr3R_7_30030001 chr3R_30030001 RAL-808_75b 1044 chr3R 30046330 30046357 chr3R 30046453 30046461 9 117 4.0 3.0 3.5 2.0 131 chr3R 30046330 intergenic CG7943 +,RpL32 - chr3R 30046396 intergenic CG7943 +,RpL32 - chr3R 30046461 intergenic CG7943 +,RpL32 - chr3R_9_30045001 chr3R_30045001 RAL-808_75b 1045 chr3R 30084849 30084876 chr3R 30086316 30086343 hobo 9 1462 3.5 5.5 4.5 1.6 1494 chr3R 30084849 intron sima + chr3R 30085596 intron sima + chr3R 30086343 intron sima + chr3R_9_30085001 chr3R_30085001 RAL-808_75b 1046 chr3R 30084877 30084886 chr3R 30086315 30086332 hobo 5 1451 2.5 5.5 4.0 1.0 1455 chr3R 30084877 intron sima + chr3R 30085604 intron sima + chr3R 30086332 intron sima + chr3R_5_30085001 chr3R_30085001 RAL-808_75b 1047 chr3R 30106405 30106413 chr3R 30106494 30106515 6 102 0.5 3.5 2.0 2.0 110 chr3R 30106405 intron sima + chr3R 30106460 intron sima + chr3R 30106515 intron sima + chr3R_6_30105001 chr3R_30105001 RAL-808_75b 1048 chr3R 30181124 30181134 chr3R 30181181 30181211 5 61 1.5 5.5 3.5 1.1 87 chr3R 30181124 3` UTR Bet5 + chr3R 30181168 3` UTR Bet5 + chr3R 30181211 3` UTR Bet5 + chr3R_5_30180001 chr3R_30180001 RAL-808_75b 1049 chr3R 30224288 30224313 chr3R 30224360 30224390 13 74 1.0 3.5 2.2 4.1 102 chr3R 30224288 intergenic not near genes chr3R 30224339 intergenic not near genes chr3R 30224390 intergenic not near genes chr3R_13_30220001 chr3R_30220001 RAL-808_75b 1050 chr3R 30317326 30317354 chr3R 30324918 30324934 roo 7 7584 1.0 3.5 2.2 2.2 7608 chr3R 30317326 intron hdc + chr3R 30321130 intron hdc + chr3R 30324934 intron hdc + chr3R_7_30320001 chr3R_30320001 RAL-808_75b 1051 chr3R 30396218 30396243 chr3R 30404484 30404509 roo 6 8264 3.5 3.0 3.2 1.4 8291 chr3R 30396218 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404509 5` UTR CR45570 + chr3R_6_30400001 chr3R_30400001 RAL-808_75b 1052 chr3R 30480480 30480511 chr3R 30482940 30482979 jockey 9 2464 3.0 3.0 3.0 2.2 2499 chr3R 30480480 intron PH4alphaEFB + chr3R 30481730 intron PH4alphaEFB + chr3R 30482979 intron PH4alphaEFB + chr3R_9_30480001 chr3R_30480001 RAL-808_75b 1053 chr3R 30498411 30498427 chr3R 30498605 30498627 6 195 0.0 5.0 2.5 1.7 216 chr3R 30498411 intron PH4alphaNE1 - chr3R 30498519 intron PH4alphaNE1 - chr3R 30498627 intron PH4alphaNE1 - chr3R_6_30495001 chr3R_30495001 RAL-808_75b 1054 chr3R 30592507 30592538 chr3R 30592617 30592632 16 103 4.0 6.5 5.2 2.6 125 chr3R 30592507 intergenic CG2246 - chr3R 30592570 intergenic CG2246 - chr3R 30592632 intergenic CG2246 - chr3R_16_30590001 chr3R_30590001 RAL-808_75b 1055 chr3R 30679533 30679550 chr3R 30686986 30686990 blood 12 7459 2.5 3.0 2.8 3.2 7457 chr3R 30679533 intergenic not near genes chr3R 30683262 intergenic not near genes chr3R 30686990 intergenic not near genes chr3R_12_30680001 chr3R_30680001 RAL-808_75b 1056 chr3R 30744091 30744128 chr3R 30744169 30744178 9 69 3.5 3.0 3.2 2.1 87 chr3R 30744091 3` UTR CG15543 + chr3R 30744134 3` UTR CG15543 + chr3R 30744178 3` UTR CG15543 + chr3R_9_30740001 chr3R_30740001 RAL-808_75b 1057 chr3R 30850142 30850264 chr3R 30850228 30850356 8 89 1.5 1.5 1.5 3.2 214 chr3R 30850142 intergenic not near genes chr3R 30850249 intergenic not near genes chr3R 30850356 intergenic not near genes chr3R_8_30850001 chr3R_30850001 RAL-808_75b 1058 chr3R 31026502 31026519 chr3R 31026569 31026576 8 70 2.0 5.0 3.5 1.8 74 chr3R 31026502 intergenic not near genes chr3R 31026539 intergenic not near genes chr3R 31026576 intergenic not near genes chr3R_8_31025001 chr3R_31025001 RAL-808_75b 1059 chr3R 31042112 31042143 chr3R 31042199 31042212 10 85 2.5 3.5 3.0 2.5 100 chr3R 31042112 intron CanA1 + chr3R 31042162 intron CanA1 + chr3R 31042212 intron CanA1 + chr3R_10_31040001 chr3R_31040001 RAL-808_75b 1060 chr3R 31074230 31074253 chr3R 31081828 31081850 springer 11 7595 3.0 4.0 3.5 2.4 7620 chr3R 31074230 intron Sox100B + chr3R 31078040 intron Sox100B + chr3R 31081850 intron Sox100B + chr3R_11_31075001 chr3R_31075001 RAL-808_75b 1061 chr3R 31100047 31100053 chr3R 31100144 31100151 4 98 7.0 3.0 5.0 0.7 104 chr3R 31100047 exon CG15553 - chr3R 31100099 exon CG15553 - chr3R 31100151 exon CG15553 - chr3R_4_31100001 chr3R_31100001 RAL-808_75b 1062 chr3R 31279375 31279403 chr3R 31285564 31285570 diver 6 6181 4.5 3.0 3.8 1.2 6195 chr3R 31279375 intergenic not near genes chr3R 31282472 intergenic not near genes chr3R 31285570 intergenic not near genes chr3R_6_31280001 chr3R_31280001 RAL-808_75b 1063 chr3R 31413089 31413122 chr3R 31418289 31418297 copia 10 5197 1.5 1.0 1.2 4.5 5208 chr3R 31413089 intron Gprk2 + chr3R 31415693 intron Gprk2 + chr3R 31418297 intron Gprk2 + chr3R_10_31415001 chr3R_31415001 RAL-808_75b 1064 chr3R 31426881 31426912 chr3R 31426973 31426983 4 85 3.0 1.5 2.2 1.2 102 chr3R 31426881 intron Gprk2 + chr3R 31426932 intron Gprk2 + chr3R 31426983 intron Gprk2 + chr3R_4_31425001 chr3R_31425001 RAL-808_75b 1065 chr3R 31430723 31430745 chr3R 31430811 31430813 5 82 2.0 4.5 3.2 1.2 90 chr3R 31430723 intron Gprk2 + chr3R 31430768 intron Gprk2 + chr3R 31430813 intron Gprk2 + chr3R_5_31430001 chr3R_31430001 RAL-808_75b 1066 chr3R 31550400 31550427 chr3R 31550487 31550500 6 78 6.5 3.5 5.0 1.0 100 chr3R 31550400 intron nyo + chr3R 31550450 intron nyo + chr3R 31550500 intron nyo + chr3R_6_31550001 chr3R_31550001 RAL-808_75b 1067 chr3R 31691541 31691564 chr3R 31696307 31696325 Doc 8 4761 4.0 8.5 6.2 1.1 4784 chr3R 31691541 intergenic not near genes chr3R 31693933 intergenic not near genes chr3R 31696325 intergenic not near genes chr3R_8_31690001 chr3R_31690001 RAL-808_75b 1068 chr3R 31997993 31998020 chr3R 32005462 32005490 blood 7 7464 3.5 5.0 4.2 1.3 7497 chr3R 31997993 intron heph - chr3R 32001742 intron heph - chr3R 32005490 intron heph - chr3R_7_32000001 chr3R_32000001 RAL-808_75b 1069 chr4 671607 671635 chr4 680188 680198 Tirant 7 8577 4.5 6.5 5.5 1.1 8591 chr4 671607 intron CG11360 + chr4 675902 intron CG11360 + chr4 680198 intron CG11360 + chr4_7_675001 chr4_675001 RAL-808_75b 1070 chr4 896785 896818 chr4 896862 896864 5 58 1.0 2.5 1.8 1.8 79 chr4 896785 intron unc-13 - chr4 896824 intron unc-13 - chr4 896864 intron unc-13 - chr4_5_895001 chr4_895001 RAL-808_75b 1071 chrX 440998 441025 chrX 441075 441102 7 76 2.0 3.0 2.5 2.0 104 chrX 440998 intron CG32816 - chrX 441050 intron CG32816 - chrX 441102 intron CG32816 - chrX_7_440001 chrX_440001 RAL-808_75b 1072 chrX 443501 443525 chrX 443583 443594 5 78 3.0 4.5 3.8 1.0 93 chrX 443501 intron CG32816 - chrX 443548 intron CG32816 - chrX 443594 intron CG32816 - chrX_5_440001 chrX_440001 RAL-808_75b 1073 chrX 551437 551451 chrX 558998 559005 412 4 7558 5.0 2.0 3.5 0.9 7568 chrX 551437 intron Appl + chrX 555221 intron Appl + chrX 559005 intron Appl + chrX_4_555001 chrX_555001 RAL-808_75b 1074 chrX 611143 611161 chrX 611233 611251 6 88 2.0 3.0 2.5 1.7 108 chrX 611143 intron CG13366 - chrX 611197 intron CG13366 - chrX 611251 intron CG13366 - chrX_6_610001 chrX_610001 RAL-808_75b 1075 chrX 670270 670293 chrX 670350 670358 4 76 0.5 2.5 1.5 1.6 88 chrX 670270 intergenic not near genes chrX 670314 intergenic not near genes chrX 670358 intergenic not near genes chrX_4_670001 chrX_670001 RAL-808_75b 1076 chrX 680840 680867 chrX 680923 680934 5 78 1.5 3.0 2.2 1.6 94 chrX 680840 intergenic not near genes chrX 680887 intergenic not near genes chrX 680934 intergenic not near genes chrX_5_680001 chrX_680001 RAL-808_75b 1077 chrX 706806 706829 chrX 707168 707190 6 358 0.0 7.0 3.5 1.3 384 chrX 706806 intron sdk + chrX 706998 intron sdk + chrX 707190 intron sdk + chrX_6_705001 chrX_705001 RAL-808_75b 1078 chrX 778133 778153 chrX 778217 778227 5 85 5.5 2.0 3.8 1.0 94 chrX 778133 intron fz3 + chrX 778180 intron fz3 + chrX 778227 intron fz3 + chrX_5_775001 chrX_775001 RAL-808_75b 1079 chrX 778154 778159 chrX 778216 778248 5 81 4.5 2.0 3.2 1.2 94 chrX 778154 intron fz3 + chrX 778201 intron fz3 + chrX 778248 intron fz3 + chrX_5_775001 chrX_775001 RAL-808_75b 1080 chrX 806805 806817 chrX 806882 806900 4 82 4.0 0.5 2.2 1.2 95 chrX 806805 intron Sec22 + chrX 806852 intron Sec22 + chrX 806900 intron Sec22 + chrX_4_805001 chrX_805001 RAL-808_75b 1081 chrX 827602 827628 chrX 835391 835402 roo 8 7780 4.5 0.5 2.5 2.3 7800 chrX 827602 intron CG43867 - chrX 831502 intron CG43867 - chrX 835402 intron CG43867 - chrX_8_830001 chrX_830001 RAL-808_75b 1082 chrX 906706 906731 chrX 908490 908513 S-element 7 1787 2.5 4.0 3.2 1.7 1807 chrX 906706 intron CG43867 - chrX 907610 intron CG43867 - chrX 908513 intron CG43867 - chrX_7_905001 chrX_905001 RAL-808_75b 1083 chrX 1053117 1053120 chrX 16983076 16983077 6 15929958 8.0 11.5 9.8 0.6 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_6_9015001 chrX_9015001 RAL-808_75b 1084 chrX 1253734 1253753 chrX 1253816 1253834 11 79 3.5 4.5 4.0 2.2 100 chrX 1253734 intron Atf3 - chrX 1253784 intron Atf3 - chrX 1253834 intron Atf3 - chrX_11_1250001 chrX_1250001 RAL-808_75b 1085 chrX 1253755 1253764 chrX 1253815 1253842 6 77 2.5 4.5 3.5 1.3 87 chrX 1253755 intron Atf3 - chrX 1253798 intron Atf3 - chrX 1253842 intron Atf3 - chrX_6_1250001 chrX_1250001 RAL-808_75b 1086 chrX 1627977 1628005 chrX 1635441 1635442 gtwin 8 7460 5.0 2.5 3.8 1.7 7465 chrX 1627977 intron,intron Mur2B -,br + chrX 1631710 intron,intron Mur2B -,br + chrX 1635442 intron,intron Mur2B -,br + chrX_8_1630001 chrX_1630001 RAL-808_75b 1087 chrX 1845755 1845761 chrX 1846302 1846335 5 566 3.0 4.0 3.5 1.1 580 chrX 1845755 intron CG42666 + chrX 1846045 intron CG42666 + chrX 1846335 intron CG42666 + chrX_5_1845001 chrX_1845001 RAL-808_75b 1088 chrX 2069367 2069389 chrX 2069467 2069479 4 94 5.0 2.0 3.5 0.9 112 chrX 2069367 intron,exon CG4199 -,CG4194 + chrX 2069423 intron,3` UTR CG4199 -,CG4194 + chrX 2069479 intron,3` UTR CG4199 -,CG4194 + chrX_4_2065001 chrX_2065001 RAL-808_75b 1089 chrX 2107192 2107208 chrX 2107277 2107291 5 87 2.5 3.5 3.0 1.2 99 chrX 2107192 intron csw + chrX 2107242 intron csw + chrX 2107291 intron csw + chrX_5_2105001 chrX_2105001 RAL-808_75b 1090 chrX 2844911 2844929 chrX 2852306 2852331 mdg1 6 7403 3.0 1.0 2.0 2.0 7420 chrX 2844911 intron kirre + chrX 2848621 intron kirre + chrX 2852331 intron kirre + chrX_6_2845001 chrX_2845001 RAL-808_75b 1091 chrX 3109448 3109476 chrX 3109524 3109533 6 74 2.0 2.5 2.2 1.9 85 chrX 3109448 intron kirre + chrX 3109490 intron kirre + chrX 3109533 intron kirre + chrX_6_3105001 chrX_3105001 RAL-808_75b 1092 chrX 3275539 3275559 chrX 3275615 3275626 7 78 1.5 3.0 2.2 2.2 87 chrX 3275539 intron dnc + chrX 3275582 intron dnc + chrX 3275626 intron dnc + chrX_7_3275001 chrX_3275001 RAL-808_75b 1093 chrX 3408988 3409018 chrX 3409065 3409077 8 72 0.5 3.5 2.0 2.7 89 chrX 3408988 intron,intron CR44999 +,CG12535 - chrX 3409032 intron,intron CR44999 +,CG12535 - chrX 3409077 intron,intron CR44999 +,CG12535 - chrX_8_3405001 chrX_3405001 RAL-808_75b 1094 chrX 3415032 3415050 chrX 3421217 3421235 3S18 5 6185 1.0 6.0 3.5 1.1 6203 chrX 3415032 intron,intron CR44999 +,CG12535 - chrX 3418134 intron,intron CR44999 +,CG12535 - chrX 3421235 intron,intron CR44999 +,CG12535 - chrX_5_3415001 chrX_3415001 RAL-808_75b 1095 chrX 3513776 3513789 chrX 3513840 3513872 9 72 4.0 3.0 3.5 2.0 96 chrX 3513776 intron,intron CR44999 +,CG32791 - chrX 3513824 intron,intron CR44999 +,CG32791 - chrX 3513872 intron,intron CR44999 +,CG32791 - chrX_9_3510001 chrX_3510001 RAL-808_75b 1096 chrX 3597111 3597127 chrX 3597199 3597215 6 86 0.5 1.0 0.8 3.3 104 chrX 3597111 intron AstA-R1 + chrX 3597163 intron AstA-R1 + chrX 3597215 intron AstA-R1 + chrX_6_3595001 chrX_3595001 RAL-808_75b 1097 chrX 3842329 3842351 chrX 3842567 3842578 pogo 4 234 4.0 2.5 3.2 1.0 249 chrX 3842329 intron ec + chrX 3842454 intron ec + chrX 3842578 intron ec + chrX_4_3840001 chrX_3840001 RAL-808_75b 1098 chrX 3866127 3866134 chrX 3866187 3866191 4 68 1.5 2.0 1.8 1.4 64 chrX 3866127 intron yin - chrX 3866159 intron yin - chrX 3866191 intron yin - chrX_4_3865001 chrX_3865001 RAL-808_75b 1099 chrX 3881275 3881294 chrX 3881412 3881432 5 138 3.5 1.5 2.5 1.4 157 chrX 3881275 intron VhaAC39-1 + chrX 3881354 intron VhaAC39-1 + chrX 3881432 intron VhaAC39-1 + chrX_5_3880001 chrX_3880001 RAL-808_75b 1100 chrX 3891145 3891176 chrX 3891263 3891280 8 110 3.5 3.0 3.2 1.9 135 chrX 3891145 intergenic CG42541 - chrX 3891212 intergenic CG42541 - chrX 3891280 intergenic CG42541 - chrX_8_3890001 chrX_3890001 RAL-808_75b 1101 chrX 4361432 4361451 chrX 4361509 4361524 4 76 1.5 4.0 2.8 1.1 92 chrX 4361432 intron norpA + chrX 4361478 intron norpA + chrX 4361524 intron norpA + chrX_4_4360001 chrX_4360001 RAL-808_75b 1102 chrX 4389474 4389491 chrX 4389553 4389566 6 73 3.0 2.0 2.5 1.7 92 chrX 4389474 intron CR32773 - chrX 4389520 intron CR32773 - chrX 4389566 intron CR32773 - chrX_6_4385001 chrX_4385001 RAL-808_75b 1103 chrX 4396986 4397009 chrX 4397063 4397082 9 79 4.0 1.0 2.5 2.6 96 chrX 4396986 intron CR32773 - chrX 4397034 intron CR32773 - chrX 4397082 intron CR32773 - chrX_9_4395001 chrX_4395001 RAL-808_75b 1104 chrX 4436461 4436468 chrX 4436537 4436543 4 76 7.0 0.5 3.8 0.8 82 chrX 4436461 intron,intron CR32773 -,bi + chrX 4436502 intron,intron CR32773 -,bi + chrX 4436543 intron,intron CR32773 -,bi + chrX_4_4435001 chrX_4435001 RAL-808_75b 1105 chrX 4496442 4496458 chrX 4496524 4496531 4 80 2.0 1.5 1.8 1.4 89 chrX 4496442 intron CR32773 - chrX 4496486 intron CR32773 - chrX 4496531 intron CR32773 - chrX_4_4495001 chrX_4495001 RAL-808_75b 1106 chrX 4515834 4515859 chrX 4515912 4515912 7 73 1.0 1.5 1.2 3.2 78 chrX 4515834 intron CR32773 - chrX 4515873 intron CR32773 - chrX 4515912 intron CR32773 - chrX_7_4515001 chrX_4515001 RAL-808_75b 1107 chrX 4731826 4731855 chrX 4736903 4736905 jockey 5 5071 1.5 0.5 1.0 2.5 5079 chrX 4731826 intergenic not near genes chrX 4734366 intergenic not near genes chrX 4736905 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-808_75b 1108 chrX 4763263 4763280 chrX 4763750 4763758 Stalker4 4 485 4.5 4.5 4.5 0.7 495 chrX 4763263 intergenic not near genes chrX 4763510 intergenic not near genes chrX 4763758 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-808_75b 1109 chrX 4792386 4792411 chrX 4792818 4792839 jockey 7 431 3.5 3.0 3.2 1.7 453 chrX 4792386 intergenic not near genes chrX 4792612 intergenic not near genes chrX 4792839 intergenic not near genes chrX_7_4790001 chrX_4790001 RAL-808_75b 1110 chrX 4827995 4828002 chrX 4835339 4835362 Stalker4 6 7359 2.5 4.0 3.2 1.4 7367 chrX 4827995 intergenic not near genes chrX 4831678 intergenic not near genes chrX 4835362 intergenic not near genes chrX_6_4830001 chrX_4830001 RAL-808_75b 1111 chrX 4931361 4931377 chrX 4931448 4931457 8 90 7.0 3.0 5.0 1.3 96 chrX 4931361 intron CG44774 - chrX 4931409 intron CG44774 - chrX 4931457 intron CG44774 - chrX_8_4930001 chrX_4930001 RAL-808_75b 1112 chrX 5096286 5096304 chrX 5103839 5103869 springer 7 7561 2.5 2.5 2.5 2.0 7583 chrX 5096286 intron,intron CG15465 +,rg + chrX 5100078 intron,intron CG15465 +,rg + chrX 5103869 intron,intron CG15465 +,rg + chrX_7_5100001 chrX_5100001 RAL-808_75b 1113 chrX 6203769 6203788 chrX 6203835 6203870 5 76 2.5 5.5 4.0 1.0 101 chrX 6203769 intergenic not near genes chrX 6203820 intergenic not near genes chrX 6203870 intergenic not near genes chrX_5_6200001 chrX_6200001 RAL-808_75b 1114 chrX 6314430 6314449 chrX 6314494 6314525 7 62 2.5 4.0 3.2 1.7 95 chrX 6314430 intron CG15894 + chrX 6314478 intron CG15894 + chrX 6314525 intron CG15894 + chrX_7_6310001 chrX_6310001 RAL-808_75b 1115 chrX 6392896 6392903 chrX 6397631 6397634 Doc 5 4750 3.0 4.0 3.5 1.1 4738 chrX 6392896 intergenic not near genes chrX 6395265 intergenic not near genes chrX 6397634 intergenic not near genes chrX_5_6395001 chrX_6395001 RAL-808_75b 1116 chrX 6562824 6562851 chrX 6571299 6571325 Tirant 5 8472 2.5 2.0 2.2 1.6 8501 chrX 6562824 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571325 intron CG34417 + chrX_5_6565001 chrX_6565001 RAL-808_75b 1117 chrX 6605478 6605495 chrX 6608500 6608504 Burdock 4 3017 1.0 4.0 2.5 1.1 3026 chrX 6605478 intron pigs + chrX 6606991 intron pigs + chrX 6608504 intron pigs + chrX_4_6605001 chrX_6605001 RAL-808_75b 1118 chrX 6639589 6639617 chrX 6639667 6639694 6 75 4.5 3.5 4.0 1.2 105 chrX 6639589 intron pigs + chrX 6639642 intron pigs + chrX 6639694 intron pigs + chrX_6_6635001 chrX_6635001 RAL-808_75b 1119 chrX 6734242 6734267 chrX 6734358 6734369 5 110 2.5 1.5 2.0 1.7 127 chrX 6734242 intron,intron CG3168 -,CR43461 + chrX 6734306 intron,intron CG3168 -,CR43461 + chrX 6734369 intron,intron CG3168 -,CR43461 + chrX_5_6730001 chrX_6730001 RAL-808_75b 1120 chrX 6736420 6736451 chrX 6736519 6736546 4 96 0.5 0.5 0.5 2.7 126 chrX 6736420 intron CG3168 - chrX 6736483 intron CG3168 - chrX 6736546 intron CG3168 - chrX_4_6735001 chrX_6735001 RAL-808_75b 1121 chrX 6737526 6737550 chrX 6737607 6737624 7 75 1.5 4.0 2.8 1.8 98 chrX 6737526 intron CG3168 - chrX 6737575 intron CG3168 - chrX 6737624 intron CG3168 - chrX_7_6735001 chrX_6735001 RAL-808_75b 1122 chrX 6897689 6897711 chrX 6897799 6897812 6 108 1.0 3.0 2.0 2.0 123 chrX 6897689 intergenic not near genes chrX 6897750 intergenic not near genes chrX 6897812 intergenic not near genes chrX_6_6895001 chrX_6895001 RAL-808_75b 1123 chrX 7023601 7023633 chrX 7030991 7031022 Tabor 8 7385 4.5 5.0 4.8 1.4 7421 chrX 7023601 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031022 intron CG12541 - chrX_8_7025001 chrX_7025001 RAL-808_75b 1124 chrX 7047505 7047512 chrX 7047591 7047593 7 88 1.0 4.0 2.5 2.0 88 chrX 7047505 intron CG12541 - chrX 7047549 intron CG12541 - chrX 7047593 intron CG12541 - chrX_7_7045001 chrX_7045001 RAL-808_75b 1125 chrX 7125246 7125278 chrX 7134404 7134437 roo 9 9155 2.5 3.5 3.0 2.2 9191 chrX 7125246 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134437 intergenic not near genes chrX_9_7125001 chrX_7125001 RAL-808_75b 1126 chrX 7702917 7702930 chrX 7703338 7703369 jockey 4 433 3.5 5.5 4.5 0.7 452 chrX 7702917 intron CHES-1-like - chrX 7703143 intron CHES-1-like - chrX 7703369 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-808_75b 1127 chrX 8008916 8008928 chrX 8009166 8009177 4 248 4.0 5.0 4.5 0.7 261 chrX 8008916 intron Tbh + chrX 8009046 intron Tbh + chrX 8009177 intron Tbh + chrX_4_8005001 chrX_8005001 RAL-808_75b 1128 chrX 8506550 8506558 chrX 8506736 8506764 4 202 0.5 1.0 0.8 2.2 214 chrX 8506550 intron CG33181 + chrX 8506657 intron CG33181 + chrX 8506764 intron CG33181 + chrX_4_8505001 chrX_8505001 RAL-808_75b 1129 chrX 8536759 8536779 chrX 8536835 8536855 5 74 3.0 5.5 4.2 1.0 96 chrX 8536759 intron Nrg + chrX 8536807 intron Nrg + chrX 8536855 intron Nrg + chrX_5_8535001 chrX_8535001 RAL-808_75b 1130 chrX 8922343 8922360 chrX 8922757 8922781 jockey 7 421 5.0 3.5 4.2 1.3 438 chrX 8922343 intron rdgA + chrX 8922562 intron rdgA + chrX 8922781 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-808_75b 1131 chrX 9508147 9508166 chrX 9509645 9509683 jockey 5 1507 3.0 0.0 1.5 2.0 1536 chrX 9508147 intron CG32700 - chrX 9508915 intron CG32700 - chrX 9509683 intron CG32700 - chrX_5_9505001 chrX_9505001 RAL-808_75b 1132 chrX 9543397 9543427 chrX 9543476 9543505 5 70 3.0 4.0 3.5 1.1 108 chrX 9543397 intron CG32700 - chrX 9543451 intron CG32700 - chrX 9543505 intron CG32700 - chrX_5_9540001 chrX_9540001 RAL-808_75b 1133 chrX 9575805 9575822 chrX 9576113 9576138 mdg3 7 315 4.0 5.0 4.5 1.3 333 chrX 9575805 intron,exon CG32699 -,CG42395 - chrX 9575972 intron,intron CG32699 -,CG42395 - chrX 9576138 intron,5` UTR CG32699 -,CG42395 - chrX_7_9575001 chrX_9575001 RAL-808_75b 1134 chrX 9702553 9702573 chrX 9702636 9702656 4 80 3.5 2.5 3.0 1.0 103 chrX 9702553 intergenic not near genes chrX 9702604 intergenic not near genes chrX 9702656 intergenic not near genes chrX_4_9700001 chrX_9700001 RAL-808_75b 1135 chrX 9758049 9758070 chrX 9758134 9758155 4 82 2.5 0.0 1.2 1.8 106 chrX 9758049 intergenic not near genes chrX 9758102 intergenic not near genes chrX 9758155 intergenic not near genes chrX_4_9755001 chrX_9755001 RAL-808_75b 1136 chrX 10035452 10035462 chrX 10035527 10035548 5 81 0.0 6.5 3.2 1.2 96 chrX 10035452 exon Cht6 + chrX 10035500 exon Cht6 + chrX 10035548 exon Cht6 + chrX_5_10035001 chrX_10035001 RAL-808_75b 1137 chrX 10336772 10336787 chrX 10337157 10337170 4 384 3.5 0.5 2.0 1.3 398 chrX 10336772 intron CG43740 + chrX 10336971 intron CG43740 + chrX 10337170 intron CG43740 + chrX_4_10335001 chrX_10335001 RAL-808_75b 1138 chrX 10550874 10550889 chrX 10552324 10552326 hobo 6 1452 2.0 1.5 1.8 2.1 1452 chrX 10550874 intron spri - chrX 10551600 intron spri - chrX 10552326 intron spri - chrX_6_10550001 chrX_10550001 RAL-808_75b 1139 chrX 10686056 10686072 chrX 10691186 10691206 roo 6 5134 4.5 2.5 3.5 1.3 5150 chrX 10686056 intron X11Lbeta + chrX 10688631 intron X11Lbeta + chrX 10691206 intron X11Lbeta + chrX_6_10685001 chrX_10685001 RAL-808_75b 1140 chrX 10719144 10719148 chrX 10719202 10719232 5 76 0.0 1.0 0.5 3.3 88 chrX 10719144 intron CG32676 - chrX 10719188 intron CG32676 - chrX 10719232 intron CG32676 - chrX_5_10715001 chrX_10715001 RAL-808_75b 1141 chrX 11254169 11254201 chrX 11254280 11254312 8 110 1.0 2.0 1.5 3.2 143 chrX 11254169 intron CG44422 - chrX 11254240 intron CG44422 - chrX 11254312 intron CG44422 - chrX_8_11250001 chrX_11250001 RAL-808_75b 1142 chrX 11312072 11312091 chrX 11319408 11319427 Stalker2 5 7334 1.0 4.5 2.8 1.3 7355 chrX 11312072 intergenic not near genes chrX 11315750 intergenic not near genes chrX 11319427 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-808_75b 1143 chrX 11633423 11633449 chrX 11640474 11640489 297 9 7050 0.0 3.5 1.8 3.2 7066 chrX 11633423 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640489 intron Ptp10D + chrX_9_11635001 chrX_11635001 RAL-808_75b 1144 chrX 11922373 11922381 chrX 11922500 11922514 5 129 1.0 3.5 2.2 1.6 141 chrX 11922373 exon Sclp - chrX 11922444 intron Sclp - chrX 11922514 intron Sclp - chrX_5_11920001 chrX_11920001 RAL-808_75b 1145 chrX 12094036 12094067 chrX 12094125 12094129 9 85 4.0 1.0 2.5 2.6 93 chrX 12094036 intron,intron CR43960 +,Ten-a + chrX 12094082 intron,intron CR43960 +,Ten-a + chrX 12094129 intron,intron CR43960 +,Ten-a + chrX_9_12090001 chrX_12090001 RAL-808_75b 1146 chrX 12202777 12202803 chrX 12202854 12202885 4 82 1.5 2.0 1.8 1.4 108 chrX 12202777 intron Ten-a + chrX 12202831 intron Ten-a + chrX 12202885 intron Ten-a + chrX_4_12200001 chrX_12200001 RAL-808_75b 1147 chrX 12240667 12240696 chrX 12240765 12240787 5 93 0.5 1.5 1.0 2.5 120 chrX 12240667 intron Ten-a + chrX 12240727 intron Ten-a + chrX 12240787 intron Ten-a + chrX_5_12240001 chrX_12240001 RAL-808_75b 1148 chrX 12528866 12528883 chrX 12528941 12528954 4 74 2.0 0.0 1.0 2.0 88 chrX 12528866 intron CG43921 - chrX 12528910 intron CG43921 - chrX 12528954 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-808_75b 1149 chrX 12557160 12557164 chrX 12557235 12557240 4 76 5.0 4.0 4.5 0.7 80 chrX 12557160 intron CG43921 - chrX 12557200 intron CG43921 - chrX 12557240 intron CG43921 - chrX_4_12555001 chrX_12555001 RAL-808_75b 1150 chrX 13172349 13172383 chrX 13172425 13172455 12 72 4.0 3.5 3.8 2.5 106 chrX 13172349 exon CG34411 - chrX 13172402 intron CG34411 - chrX 13172455 intron CG34411 - chrX_12_13170001 chrX_13170001 RAL-808_75b 1151 chrX 13356356 13356368 chrX 13356445 13356465 5 95 0.0 3.5 1.8 1.8 109 chrX 13356356 intergenic not near genes chrX 13356410 intergenic not near genes chrX 13356465 intergenic not near genes chrX_5_13355001 chrX_13355001 RAL-808_75b 1152 chrX 13374839 13374851 chrX 13374916 13374925 4 74 5.0 1.0 3.0 1.0 86 chrX 13374839 intron CG1640 + chrX 13374882 intron CG1640 + chrX 13374925 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-808_75b 1153 chrX 13463647 13463677 chrX 13469224 13469254 mdg3 5 5571 1.5 0.0 0.8 2.8 5607 chrX 13463647 intron Neto + chrX 13466450 intron Neto + chrX 13469254 intron Neto + chrX_5_13465001 chrX_13465001 RAL-808_75b 1154 chrX 13759146 13759159 chrX 13759243 13759251 4 94 1.0 3.5 2.2 1.2 105 chrX 13759146 intergenic Yp3 + chrX 13759198 intergenic Yp3 + chrX 13759251 intergenic Yp3 + chrX_4_13755001 chrX_13755001 RAL-808_75b 1155 chrX 13937984 13938003 chrX 13941245 13941247 I-element 5 3259 2.5 2.5 2.5 1.4 3263 chrX 13937984 intron mamo - chrX 13939616 intron mamo - chrX 13941247 intron mamo - chrX_5_13935001 chrX_13935001 RAL-808_75b 1156 chrX 13975882 13975902 chrX 13975959 13975977 5 76 0.5 3.5 2.0 1.7 95 chrX 13975882 intron mamo - chrX 13975930 intron mamo - chrX 13975977 intron mamo - chrX_5_13975001 chrX_13975001 RAL-808_75b 1157 chrX 14131489 14131523 chrX 14131569 14131569 5 69 0.5 6.0 3.2 1.2 80 chrX 14131489 intergenic not near genes chrX 14131529 intergenic not near genes chrX 14131569 intergenic not near genes chrX_5_14130001 chrX_14130001 RAL-808_75b 1158 chrX 14341025 14341043 chrX 14341140 14341167 5 122 3.0 2.0 2.5 1.4 142 chrX 14341025 intron dpr8 + chrX 14341096 intron dpr8 + chrX 14341167 intron dpr8 + chrX_5_14340001 chrX_14340001 RAL-808_75b 1159 chrX 14570083 14570102 chrX 14570162 14570180 5 81 2.5 1.0 1.8 1.8 97 chrX 14570083 intergenic not near genes chrX 14570132 intergenic not near genes chrX 14570180 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-808_75b 1160 chrX 14628184 14628212 chrX 14628273 14628295 5 89 3.0 2.0 2.5 1.4 111 chrX 14628184 intron NetA - chrX 14628240 intron NetA - chrX 14628295 intron NetA - chrX_5_14625001 chrX_14625001 RAL-808_75b 1161 chrX 15248267 15248279 chrX 15248343 15248355 4 75 2.0 0.5 1.2 1.8 88 chrX 15248267 intergenic not near genes chrX 15248311 intergenic not near genes chrX 15248355 intergenic not near genes chrX_4_15245001 chrX_15245001 RAL-808_75b 1162 chrX 15413068 15413088 chrX 15417353 15417356 Juan 4 4286 4.0 3.5 3.8 0.8 4288 chrX 15413068 intron Cngl - chrX 15415212 intron Cngl - chrX 15417356 intron Cngl - chrX_4_15415001 chrX_15415001 RAL-808_75b 1163 chrX 15678050 15678067 chrX 15678127 15678144 4 77 4.0 4.5 4.2 0.8 94 chrX 15678050 intergenic CG12708 + chrX 15678097 intergenic CG12708 + chrX 15678144 intergenic CG12708 + chrX_4_15675001 chrX_15675001 RAL-808_75b 1164 chrX 15681399 15681420 chrX 15681478 15681501 6 80 0.5 1.5 1.0 3.0 102 chrX 15681399 intergenic not near genes chrX 15681450 intergenic not near genes chrX 15681501 intergenic not near genes chrX_6_15680001 chrX_15680001 RAL-808_75b 1165 chrX 15818773 15818808 chrX 15818849 15818884 7 74 2.0 2.0 2.0 2.3 111 chrX 15818773 intron sd + chrX 15818828 intron sd + chrX 15818884 intron sd + chrX_7_15815001 chrX_15815001 RAL-808_75b 1166 chrX 15935050 15935077 chrX 15935138 15935163 4 85 1.5 3.0 2.2 1.2 113 chrX 15935050 intron Stim - chrX 15935106 intron Stim - chrX 15935163 intron Stim - chrX_4_15935001 chrX_15935001 RAL-808_75b 1167 chrX 16492645 16492678 chrX 16498222 16498255 mdg3 5 5576 2.5 0.5 1.5 2.0 5610 chrX 16492645 intron para - chrX 16495450 intron para - chrX 16498255 intron para - chrX_5_16495001 chrX_16495001 RAL-808_75b 1168 chrX 17011966 17011994 chrX 17012049 17012073 5 77 2.0 4.5 3.2 1.2 107 chrX 17011966 intron CG45002 - chrX 17012020 intron CG45002 - chrX 17012073 intron CG45002 - chrX_5_17010001 chrX_17010001 RAL-808_75b 1169 chrX 17061566 17061602 chrX 17061689 17061725 7 119 1.5 2.0 1.8 2.5 159 chrX 17061566 intron CG45002 - chrX 17061646 intron CG45002 - chrX 17061725 intron CG45002 - chrX_7_17060001 chrX_17060001 RAL-808_75b 1170 chrX 17352606 17352621 chrX 17352691 17352702 7 92 0.5 1.0 0.8 3.9 96 chrX 17352606 intergenic not near genes chrX 17352654 intergenic not near genes chrX 17352702 intergenic not near genes chrX_7_17350001 chrX_17350001 RAL-808_75b 1171 chrX 17536853 17536884 chrX 17536936 17536938 4 76 1.5 2.0 1.8 1.4 85 chrX 17536853 intron CG43658 - chrX 17536896 intron CG43658 - chrX 17536938 intron CG43658 - chrX_4_17535001 chrX_17535001 RAL-808_75b 1172 chrX 17680907 17680915 chrX 17680971 17680988 7 71 5.0 6.0 5.5 1.1 81 chrX 17680907 intron chas - chrX 17680948 intron chas - chrX 17680988 intron chas - chrX_7_17680001 chrX_17680001 RAL-808_75b 1173 chrX 17741361 17741370 chrX 17741489 17741502 4 137 0.0 0.5 0.2 3.3 141 chrX 17741361 intron CG42684 + chrX 17741432 intron CG42684 + chrX 17741502 intron CG42684 + chrX_4_17740001 chrX_17740001 RAL-808_75b 1174 chrX 18427381 18427401 chrX 18427791 18427812 6 411 1.0 1.5 1.2 2.7 431 chrX 18427381 intergenic CG42323 + chrX 18427596 intergenic not near genes chrX 18427812 intergenic not near genes chrX_6_18425001 chrX_18425001 RAL-808_75b 1175 chrX 18770621 18770641 chrX 18770952 18770971 5 328 3.5 4.5 4.0 1.0 350 chrX 18770621 intron CCKLR-17D3 - chrX 18770796 intron CCKLR-17D3 - chrX 18770971 intron CCKLR-17D3 - chrX_5_18770001 chrX_18770001 RAL-808_75b 1176 chrX 18896532 18896546 chrX 18896628 18896657 4 107 3.5 1.0 2.2 1.2 125 chrX 18896532 3` UTR CG7349 + chrX 18896594 intergenic CG7349 + chrX 18896657 intergenic CG7349 + chrX_4_18895001 chrX_18895001 RAL-808_75b 1177 chrX 18896914 18896940 chrX 18896985 18896998 5 71 1.0 3.5 2.2 1.6 84 chrX 18896914 intergenic CG7349 + chrX 18896956 intergenic CG7349 + chrX 18896998 intergenic CG7349 + chrX_5_18895001 chrX_18895001 RAL-808_75b 1178 chrX 19014376 19014380 chrX 19014445 19014448 4 73 3.5 7.5 5.5 0.6 72 chrX 19014376 intron CG43759 + chrX 19014412 intron CG43759 + chrX 19014448 intron CG43759 + chrX_4_19010001 chrX_19010001 RAL-808_75b 1179 chrX 19014383 19014395 chrX 19014439 19014460 4 66 2.0 5.5 3.8 0.8 77 chrX 19014383 intron CG43759 + chrX 19014422 intron CG43759 + chrX 19014460 intron CG43759 + chrX_4_19010001 chrX_19010001 RAL-808_75b 1180 chrX 19060420 19060436 chrX 19065193 19065220 Doc 4 4781 2.0 0.5 1.2 1.8 4800 chrX 19060420 intron CG14190 + chrX 19062820 intron CG14190 + chrX 19065220 intron CG14190 + chrX_4_19060001 chrX_19060001 RAL-808_75b 1181 chrX 19099657 19099684 chrX 19099740 19099767 6 82 3.0 3.5 3.2 1.4 110 chrX 19099657 intergenic not near genes chrX 19099712 intergenic not near genes chrX 19099767 intergenic not near genes chrX_6_19095001 chrX_19095001 RAL-808_75b 1182 chrX 19125695 19125720 chrX 19125822 19125831 6 123 1.5 3.5 2.5 1.7 136 chrX 19125695 intron tgy - chrX 19125763 intron tgy - chrX 19125831 intron tgy - chrX_6_19125001 chrX_19125001 RAL-808_75b 1183 chrX 19136552 19136585 chrX 19143472 19143496 412 4 6912 2.0 3.0 2.5 1.1 6944 chrX 19136552 intergenic not near genes chrX 19140024 intergenic not near genes chrX 19143496 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-808_75b 1184 chrX 13057298 13057299 chrX 19242812 19242813 5 6185514 3.0 6.0 4.5 0.9 6185515 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242813 intergenic not near genes chrX_5_16150001 chrX_16150001 RAL-808_75b 1185 chrX 19356986 19357016 chrX 19358427 19358447 NOF 4 1438 4.0 0.0 2.0 1.3 1461 chrX 19356986 intron kek5 + chrX 19357716 intron kek5 + chrX 19358447 intron kek5 + chrX_4_19355001 chrX_19355001 RAL-808_75b 1186 chrX 19472123 19472143 chrX 19472690 19472713 jockey 5 569 4.0 4.0 4.0 1.0 590 chrX 19472123 intergenic kek5 + chrX 19472418 intergenic not near genes chrX 19472713 intergenic not near genes chrX_5_19470001 chrX_19470001 RAL-808_75b 1187 chrX 19472146 19472161 chrX 19472687 19472708 jockey 9 553 2.0 3.0 2.5 2.6 562 chrX 19472146 intergenic kek5 + chrX 19472427 intergenic not near genes chrX 19472708 intergenic not near genes chrX_9_19470001 chrX_19470001 RAL-808_75b 1188 chrX 19593962 19593977 chrX 19594035 19594047 7 75 3.0 5.0 4.0 1.4 85 chrX 19593962 exon CG14205 + chrX 19594004 intron CG14205 + chrX 19594047 intron CG14205 + chrX_7_19590001 chrX_19590001 RAL-808_75b 1189 chrX 19662038 19662055 chrX 19662261 19662278 4 221 3.0 1.0 2.0 1.3 240 chrX 19662038 intron CG14223 - chrX 19662158 intron CG14223 - chrX 19662278 intron CG14223 - chrX_4_19660001 chrX_19660001 RAL-808_75b 1190 chrX 19756141 19756150 chrX 19756217 19756237 4 79 2.0 0.0 1.0 2.0 96 chrX 19756141 intron Pmp70 + chrX 19756189 intron Pmp70 + chrX 19756237 intron Pmp70 + chrX_4_19755001 chrX_19755001 RAL-808_75b 1191 chrX 19897388 19897414 chrX 19897458 19897464 6 67 0.5 3.0 1.8 2.1 76 chrX 19897388 intron Hers + chrX 19897426 intron Hers + chrX 19897464 intron Hers + chrX_6_19895001 chrX_19895001 RAL-808_75b 1192 chrX 20041532 20041560 chrX 20041610 20041632 4 77 2.0 2.0 2.0 1.3 100 chrX 20041532 intron Dop2R - chrX 20041582 intron Dop2R - chrX 20041632 intron Dop2R - chrX_4_20040001 chrX_20040001 RAL-808_75b 1193 chrX 20359161 20359167 chrX 20359213 20359216 4 57 4.0 2.5 3.2 1.0 55 chrX 20359161 intergenic not near genes chrX 20359188 intergenic not near genes chrX 20359216 intergenic not near genes chrX_4_20355001 chrX_20355001 RAL-808_75b 1194 chrX 20377325 20377349 chrX 20378790 20378811 hobo 5 1460 7.0 7.5 7.2 0.6 1486 chrX 20377325 intergenic not near genes chrX 20378068 intergenic not near genes chrX 20378811 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-808_75b 1195 chrX 20940732 20940743 chrX 20942187 20942211 hobo 4 1464 2.0 2.0 2.0 1.3 1479 chrX 20940732 intergenic not near genes chrX 20941472 intergenic not near genes chrX 20942211 intergenic not near genes chrX_4_20940001 chrX_20940001 RAL-808_75b 1196 chrX 20940747 20940754 chrX 20942186 20942213 hobo 6 1455 1.5 2.0 1.8 2.1 1466 chrX 20940747 intergenic not near genes chrX 20941480 intergenic not near genes chrX 20942213 intergenic not near genes chrX_6_20940001 chrX_20940001 RAL-808_75b 1197 chrX 20956987 20957004 chrX 20962429 20962432 I-element 4 5438 4.5 3.5 4.0 0.8 5445 chrX 20956987 intergenic not near genes chrX 20959710 intergenic not near genes chrX 20962432 intergenic Ser6 - chrX_4_20955001 chrX_20955001 RAL-808_75b 1198 chrX 21072244 21072262 chrX 21072342 21072360 5 97 0.5 4.5 2.5 1.4 116 chrX 21072244 intron bves + chrX 21072302 intron bves + chrX 21072360 intron bves + chrX_5_21070001 chrX_21070001 RAL-808_75b 1199 chrX 21078770 21078781 chrX 21078848 21078855 4 77 2.0 1.0 1.5 1.6 85 chrX 21078770 intron bves + chrX 21078812 intron bves + chrX 21078855 intron bves + chrX_4_21075001 chrX_21075001 RAL-808_75b 1200 chrX 21086134 21086164 chrX 21087159 21087162 jockey 7 1018 3.0 2.0 2.5 2.0 1028 chrX 21086134 intergenic not near genes chrX 21086648 intergenic not near genes chrX 21087162 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-808_75b 1201 chrX 21088042 21088063 chrX 21088174 21088180 4 126 3.5 0.0 1.8 1.4 138 chrX 21088042 intergenic not near genes chrX 21088111 intergenic not near genes chrX 21088180 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-808_75b 1202 chrX 21197063 21197090 chrX 21197134 21197168 8 66 3.0 0.5 1.8 2.9 105 chrX 21197063 intergenic not near genes chrX 21197116 intergenic not near genes chrX 21197168 intergenic not near genes chrX_8_21195001 chrX_21195001 RAL-808_75b 1203 chrX 22522654 22522657 chrX 22525443 22525477 NOF 4 2812 3.0 3.0 3.0 1.0 2823 chrX 22522654 intron CG17600 + chrX 22524066 intron CG17600 + chrX 22525477 intron CG17600 + chrX_4_22520001 chrX_22520001 RAL-808_75b 1204 chrX 22564558 22564568 chrX 22575133 22575140 jockey 4 10573 13.5 4.0 8.8 0.4 10582 chrX 22564558 intergenic not near genes chrX 22569849 intergenic not near genes chrX 22575140 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-808_75b 1205 chrX 22661978 22661997 chrX 22662076 22662096 7 97 0.5 2.0 1.2 3.2 118 chrX 22661978 intron CR44997 + chrX 22662037 intron CR44997 + chrX 22662096 intron CR44997 + chrX_7_22660001 chrX_22660001 RAL-808_75b 1206 chrX 22697497 22697511 chrX 22701794 22701807 Juan 4 4297 5.5 3.0 4.2 0.8 4310 chrX 22697497 intron CR44997 + chrX 22699652 intron CR44997 + chrX 22701807 intron CR44997 + chrX_4_22695001 chrX_22695001 RAL-808_75b 1207 chrX 22992393 22992429 chrX 22992524 22992558 11 123 0.5 1.5 1.0 5.5 165 chrX 22992393 intron,intron stnA -,stnB - chrX 22992476 intron,intron stnA -,stnB - chrX 22992558 intron,intron stnA -,stnB - chrX_11_22990001 chrX_22990001 RAL-808_75b 1208 chrX 23036391 23036409 chrX 23037792 23037810 pogo 4 1401 1.5 2.5 2.0 1.3 1419 chrX 23036391 intron CG12061 + chrX 23037100 intron CG12061 + chrX 23037810 intron CG12061 + chrX_4_23035001 chrX_23035001 RAL-808_75b 1209 chrY 975593 975816 chrY 975707 975955 6 108 95.5 76.0 85.8 0.1 362 chrY 975593 intergenic not near genes chrY 975774 intergenic not near genes chrY 975955 intergenic not near genes chrY_6_975001 chrY_975001 RAL-808_75b