SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47462 47485 chr2L 52567 52589 jockey 11 5104 5.5 4.0 4.8 1.9 5127 chr2L 47462 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52589 intron Cda5 - chr2L_11_50001 chr2L_50001 RAL-805 2 chr2L 63042 63075 chr2L 63127 63160 12 85 2.0 4.0 3.0 3.0 118 chr2L 63042 intron Cda5 - chr2L 63101 intron Cda5 - chr2L 63160 intron Cda5 - chr2L_12_60001 chr2L_60001 RAL-805 3 chr2L 73796 73814 chr2L 73905 73923 4 108 2.5 3.5 3.0 1.0 127 chr2L 73796 3` UTR,intron CR44987 -,galectin + chr2L 73860 intron galectin + chr2L 73923 intron galectin + chr2L_4_70001 chr2L_70001 RAL-805 4 chr2L 92568 92597 chr2L 92801 92830 14 233 1.0 3.5 2.2 4.4 262 chr2L 92568 intergenic not near genes chr2L 92699 intergenic not near genes chr2L 92830 intergenic not near genes chr2L_14_90001 chr2L_90001 RAL-805 5 chr2L 179458 179466 chr2L 179541 179549 4 82 2.0 0.5 1.2 1.8 91 chr2L 179458 intron spen + chr2L 179504 intron spen + chr2L 179549 intron spen + chr2L_4_175001 chr2L_175001 RAL-805 6 chr2L 179471 179489 chr2L 179539 179568 7 80 1.0 0.5 0.8 3.9 97 chr2L 179471 intron spen + chr2L 179520 intron spen + chr2L 179568 intron spen + chr2L_7_175001 chr2L_175001 RAL-805 7 chr2L 263305 263319 chr2L 263451 263465 6 146 1.0 3.0 2.0 2.0 160 chr2L 263305 intron,3` UTR CG3645 -,CG17075 - chr2L 263385 intron,3` UTR CG3645 -,CG17075 - chr2L 263465 intron,3` UTR CG3645 -,CG17075 - chr2L_6_260001 chr2L_260001 RAL-805 8 chr2L 320891 320921 chr2L 321294 321324 13 402 4.5 3.0 3.8 2.7 433 chr2L 320891 intron,exon Plc21C +,CG11911 - chr2L 321108 intron,exon Plc21C +,CG11911 - chr2L 321324 intron Plc21C + chr2L_13_320001 chr2L_320001 RAL-805 9 chr2L 325132 325153 chr2L 325207 325230 6 76 3.5 4.0 3.8 1.2 98 chr2L 325132 intron Plc21C + chr2L 325181 intron Plc21C + chr2L 325230 intron Plc21C + chr2L_6_325001 chr2L_325001 RAL-805 10 chr2L 347888 347906 chr2L 355387 355406 blood 5 7499 4.5 3.5 4.0 1.0 7518 chr2L 347888 3` UTR Plc21C + chr2L 351647 intron Plc21C + chr2L 355406 3` UTR Plc21C + chr2L_5_350001 chr2L_350001 RAL-805 11 chr2L 436877 436901 chr2L 436954 436978 4 77 3.5 6.0 4.8 0.7 101 chr2L 436877 intron ex + chr2L 436928 intron ex + chr2L 436978 intron ex + chr2L_4_435001 chr2L_435001 RAL-805 12 chr2L 467357 467361 chr2L 467455 467460 4 99 7.0 6.0 6.5 0.5 103 chr2L 467357 intron CG4297 - chr2L 467408 intron CG4297 - chr2L 467460 intron CG4297 - chr2L_4_465001 chr2L_465001 RAL-805 13 chr2L 483856 483886 chr2L 483943 483952 10 84 6.0 2.5 4.2 1.9 96 chr2L 483856 intron ush + chr2L 483904 intron ush + chr2L 483952 intron ush + chr2L_10_480001 chr2L_480001 RAL-805 14 chr2L 485033 485044 chr2L 485113 485125 4 80 4.0 4.5 4.2 0.8 92 chr2L 485033 intron ush + chr2L 485079 intron ush + chr2L 485125 intron ush + chr2L_4_485001 chr2L_485001 RAL-805 15 chr2L 632708 632733 chr2L 632785 632812 10 76 3.0 6.0 4.5 1.8 104 chr2L 632708 intergenic not near genes chr2L 632760 intergenic not near genes chr2L 632812 intergenic not near genes chr2L_10_630001 chr2L_630001 RAL-805 16 chr2L 686921 686951 chr2L 695961 695991 roo 6 9040 0.0 4.0 2.0 2.0 9070 chr2L 686921 intron ds - chr2L 691456 intron ds - chr2L 695991 intron ds - chr2L_6_690001 chr2L_690001 RAL-805 17 chr2L 736888 736902 chr2L 736993 737007 6 105 1.0 4.0 2.5 1.7 119 chr2L 736888 intergenic Eaat2 - chr2L 736948 intergenic Eaat2 - chr2L 737007 intergenic Eaat2 - chr2L_6_735001 chr2L_735001 RAL-805 18 chr2L 764553 764575 chr2L 764653 764675 11 98 2.0 1.5 1.8 3.9 122 chr2L 764553 intergenic not near genes chr2L 764614 intergenic not near genes chr2L 764675 intergenic not near genes chr2L_11_760001 chr2L_760001 RAL-805 19 chr2L 770467 770488 chr2L 772246 772266 Bari1 4 1780 3.5 1.5 2.5 1.1 1799 chr2L 770467 intergenic not near genes chr2L 771366 intergenic not near genes chr2L 772266 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-805 20 chr2L 877843 877857 chr2L 877924 877938 6 80 2.5 2.0 2.2 1.9 95 chr2L 877843 3` UTR,exon CG15824 -,ninaA + chr2L 877890 3` UTR,intron CG15824 -,ninaA + chr2L 877938 3` UTR,intron CG15824 -,ninaA + chr2L_6_875001 chr2L_875001 RAL-805 21 chr2L 892406 892431 chr2L 892521 892545 8 113 5.0 4.5 4.8 1.4 139 chr2L 892406 intergenic not near genes chr2L 892476 intergenic not near genes chr2L 892545 intergenic not near genes chr2L_8_890001 chr2L_890001 RAL-805 22 chr2L 927855 927883 chr2L 928007 928035 13 151 2.5 1.5 2.0 4.3 180 chr2L 927855 intron CG4341 + chr2L 927945 intron CG4341 + chr2L 928035 intron CG4341 + chr2L_13_925001 chr2L_925001 RAL-805 23 chr2L 971921 971939 chr2L 972007 972027 9 87 2.0 4.0 3.0 2.2 106 chr2L 971921 intergenic not near genes chr2L 971974 intergenic not near genes chr2L 972027 intergenic not near genes chr2L_9_970001 chr2L_970001 RAL-805 24 chr2L 976880 976907 chr2L 984515 984543 roo 10 7636 3.5 0.0 1.8 3.6 7663 chr2L 976880 intergenic not near genes chr2L 980712 intergenic not near genes chr2L 984543 intergenic not near genes chr2L_10_980001 chr2L_980001 RAL-805 25 chr2L 1035563 1035589 chr2L 1035640 1035666 9 76 3.0 2.0 2.5 2.6 103 chr2L 1035563 intron IA-2 - chr2L 1035614 intron IA-2 - chr2L 1035666 intron IA-2 - chr2L_9_1035001 chr2L_1035001 RAL-805 26 chr2L 1060202 1060232 chr2L 1060279 1060309 15 76 1.5 4.0 2.8 3.9 107 chr2L 1060202 intron S - chr2L 1060256 intron S - chr2L 1060309 intron S - chr2L_15_1060001 chr2L_1060001 RAL-805 27 chr2L 1066094 1066124 chr2L 1066175 1066205 7 79 6.0 6.5 6.2 1.0 111 chr2L 1066094 intron S - chr2L 1066150 intron S - chr2L 1066205 intron S - chr2L_7_1065001 chr2L_1065001 RAL-805 28 chr2L 1096384 1096410 chr2L 1096463 1096489 5 79 3.0 4.0 3.5 1.1 105 chr2L 1096384 intron CG4629 - chr2L 1096436 intron CG4629 - chr2L 1096489 intron CG4629 - chr2L_5_1095001 chr2L_1095001 RAL-805 29 chr2L 1126671 1126696 chr2L 1126747 1126771 16 73 3.0 4.0 3.5 3.6 100 chr2L 1126671 intron Pino - chr2L 1126721 intron Pino - chr2L 1126771 intron Pino - chr2L_16_1125001 chr2L_1125001 RAL-805 30 chr2L 1137660 1137687 chr2L 1137840 1137867 7 179 3.0 8.0 5.5 1.1 207 chr2L 1137660 intron CG4577 + chr2L 1137764 intron CG4577 + chr2L 1137867 intron CG4577 + chr2L_7_1135001 chr2L_1135001 RAL-805 31 chr2L 1220128 1220162 chr2L 1227594 1227628 blood 20 7466 2.5 2.0 2.2 6.2 7500 chr2L 1220128 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227628 intron CG42329 + chr2L_20_1220001 chr2L_1220001 RAL-805 32 chr2L 1322025 1322036 chr2L 1322113 1322125 5 88 4.0 3.0 3.5 1.1 100 chr2L 1322025 intergenic not near genes chr2L 1322075 intergenic not near genes chr2L 1322125 intergenic not near genes chr2L_5_1320001 chr2L_1320001 RAL-805 33 chr2L 1322040 1322050 chr2L 1322111 1322139 4 84 1.5 2.5 2.0 1.3 99 chr2L 1322040 intergenic not near genes chr2L 1322090 intergenic not near genes chr2L 1322139 intergenic not near genes chr2L_4_1320001 chr2L_1320001 RAL-805 34 chr2L 1443271 1443290 chr2L 1443347 1443366 6 76 1.0 2.5 1.8 2.1 95 chr2L 1443271 exon CG43402 + chr2L 1443318 3` UTR CG43402 + chr2L 1443366 3` UTR CG43402 + chr2L_6_1440001 chr2L_1440001 RAL-805 35 chr2L 1464160 1464176 chr2L 1464392 1464403 10 230 2.0 1.0 1.5 4.0 243 chr2L 1464160 intergenic not near genes chr2L 1464282 intergenic not near genes chr2L 1464403 intergenic not near genes chr2L_10_1460001 chr2L_1460001 RAL-805 36 chr2L 1511132 1511154 chr2L 1511207 1511226 10 74 0.5 6.0 3.2 2.4 94 chr2L 1511132 intergenic not near genes chr2L 1511179 intergenic not near genes chr2L 1511226 intergenic not near genes chr2L_10_1510001 chr2L_1510001 RAL-805 37 chr2L 1564457 1564491 chr2L 1564544 1564575 11 85 1.5 4.0 2.8 2.9 118 chr2L 1564457 intron haf + chr2L 1564516 intron haf + chr2L 1564575 intron haf + chr2L_11_1560001 chr2L_1560001 RAL-805 38 chr2L 1570687 1570718 chr2L 1573559 1573590 F-element 11 2872 5.5 1.5 3.5 2.4 2903 chr2L 1570687 intron haf + chr2L 1572138 intron haf + chr2L 1573590 intron haf + chr2L_11_1570001 chr2L_1570001 RAL-805 39 chr2L 1584144 1584164 chr2L 1584384 1584387 4 236 12.5 5.0 8.8 0.4 243 chr2L 1584144 intron haf + chr2L 1584266 intron haf + chr2L 1584387 intron haf + chr2L_4_1580001 chr2L_1580001 RAL-805 40 chr2L 1584128 1584160 chr2L 1584326 1584359 12 200 14.0 10.0 12.0 0.9 231 chr2L 1584128 intron haf + chr2L 1584244 intron haf + chr2L 1584359 intron haf + chr2L_12_1580001 chr2L_1580001 RAL-805 41 chr2L 1590956 1590990 chr2L 1591032 1591065 8 75 2.5 2.0 2.2 2.5 109 chr2L 1590956 intron haf + chr2L 1591010 intron haf + chr2L 1591065 intron haf + chr2L_8_1590001 chr2L_1590001 RAL-805 42 chr2L 1635404 1635432 chr2L 1635540 1635568 10 136 0.0 3.5 1.8 3.6 164 chr2L 1635404 intergenic not near genes chr2L 1635486 intergenic not near genes chr2L 1635568 intergenic not near genes chr2L_10_1635001 chr2L_1635001 RAL-805 43 chr2L 1678958 1679009 chr2L 1686441 1686474 blood 4 7470 0.0 4.0 2.0 1.3 7516 chr2L 1678958 intron chinmo + chr2L 1682716 intron chinmo + chr2L 1686474 intron chinmo + chr2L_4_1680001 chr2L_1680001 RAL-805 44 chr2L 1711355 1711385 chr2L 1711679 1711709 mdg3 4 324 5.0 4.0 4.5 0.7 354 chr2L 1711355 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711532 3` UTR frtz - chr2L 1711709 3` UTR frtz - chr2L_4_1710001 chr2L_1710001 RAL-805 45 chr2L 1993195 1993230 chr2L 1993281 1993316 8 86 2.5 4.0 3.2 1.9 121 chr2L 1993195 intergenic not near genes chr2L 1993256 intergenic not near genes chr2L 1993316 intergenic not near genes chr2L_8_1990001 chr2L_1990001 RAL-805 46 chr2L 2049225 2049240 chr2L 2049309 2049324 5 84 0.0 7.0 3.5 1.1 99 chr2L 2049225 intergenic not near genes chr2L 2049274 intergenic not near genes chr2L 2049324 intergenic not near genes chr2L_5_2045001 chr2L_2045001 RAL-805 47 chr2L 2100377 2100400 chr2L 2109528 2109551 roo 11 9151 6.0 2.0 4.0 2.2 9174 chr2L 2100377 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_11_2100001 chr2L_2100001 RAL-805 48 chr2L 2112121 2112141 chr2L 2119774 2119803 opus 5 7658 1.0 2.5 1.8 1.8 7682 chr2L 2112121 intergenic not near genes chr2L 2115962 intergenic not near genes chr2L 2119803 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-805 49 chr2L 2260801 2260837 chr2L 2260887 2260923 12 86 0.5 2.5 1.5 4.8 122 chr2L 2260801 intergenic not near genes chr2L 2260862 intergenic not near genes chr2L 2260923 intergenic not near genes chr2L_12_2260001 chr2L_2260001 RAL-805 50 chr2L 2311071 2311092 chr2L 2311167 2311188 4 96 2.0 0.0 1.0 2.0 117 chr2L 2311071 intron CG9967 - chr2L 2311130 intron CG9967 - chr2L 2311188 intron CG9967 - chr2L_4_2310001 chr2L_2310001 RAL-805 51 chr2L 2317598 2317617 chr2L 2317674 2317675 4 72 17.0 11.5 14.2 0.3 77 chr2L 2317598 intron,intron CG9967 -,eys + chr2L 2317636 intron,intron CG9967 -,eys + chr2L 2317675 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-805 52 chr2L 2380429 2380463 chr2L 2380505 2380530 6 74 2.5 3.5 3.0 1.5 101 chr2L 2380429 3` UTR Atxn7 + chr2L 2380480 3` UTR Atxn7 + chr2L 2380530 intergenic Atxn7 + chr2L_6_2380001 chr2L_2380001 RAL-805 53 chr2L 2402316 2402339 chr2L 2402427 2402450 8 111 0.5 4.0 2.2 2.5 134 chr2L 2402316 intron VGlut + chr2L 2402383 intron VGlut + chr2L 2402450 intron VGlut + chr2L_8_2400001 chr2L_2400001 RAL-805 54 chr2L 2427377 2427399 chr2L 2427463 2427485 4 86 2.5 2.5 2.5 1.1 108 chr2L 2427377 3` UTR CR44912 - chr2L 2427431 3` UTR CR44912 - chr2L 2427485 3` UTR CR44912 - chr2L_4_2425001 chr2L_2425001 RAL-805 55 chr2L 2557834 2557847 chr2L 2557919 2557932 5 85 0.0 2.5 1.2 2.3 98 chr2L 2557834 intergenic not near genes chr2L 2557883 intergenic not near genes chr2L 2557932 intergenic not near genes chr2L_5_2555001 chr2L_2555001 RAL-805 56 chr2L 2565546 2565568 chr2L 2571614 2571636 297 8 6068 3.5 4.0 3.8 1.7 6090 chr2L 2565546 exon Cyp309a2 - chr2L 2568591 intron Cyp309a2 - chr2L 2571636 intron Cyp309a2 - chr2L_8_2565001 chr2L_2565001 RAL-805 57 chr2L 2618039 2618046 chr2L 2618117 2618124 4 78 3.0 3.5 3.2 1.0 85 chr2L 2618039 intergenic not near genes chr2L 2618082 intergenic not near genes chr2L 2618124 intergenic not near genes chr2L_4_2615001 chr2L_2615001 RAL-805 58 chr2L 2698870 2698893 chr2L 2698953 2698980 4 86 2.0 2.5 2.2 1.2 110 chr2L 2698870 intron CG31690 + chr2L 2698925 intron CG31690 + chr2L 2698980 intron CG31690 + chr2L_4_2695001 chr2L_2695001 RAL-805 59 chr2L 2713512 2713551 chr2L 2713610 2713641 15 98 2.5 5.5 4.0 3.0 129 chr2L 2713512 intron CG31690 + chr2L 2713576 intron CG31690 + chr2L 2713641 intron CG31690 + chr2L_15_2710001 chr2L_2710001 RAL-805 60 chr2L 2895688 2895718 chr2L 2895774 2895804 11 86 1.5 5.0 3.2 2.6 116 chr2L 2895688 intron lilli + chr2L 2895746 intron lilli + chr2L 2895804 intron lilli + chr2L_11_2895001 chr2L_2895001 RAL-805 61 chr2L 2927951 2927967 chr2L 2928038 2928054 5 87 1.5 3.0 2.2 1.6 103 chr2L 2927951 intron lilli + chr2L 2928002 intron lilli + chr2L 2928054 intron lilli + chr2L_5_2925001 chr2L_2925001 RAL-805 62 chr2L 2933303 2933325 chr2L 2935480 2935502 pogo 7 2177 1.5 4.0 2.8 1.8 2199 chr2L 2933303 intron lilli + chr2L 2934402 intron lilli + chr2L 2935502 intron lilli + chr2L_7_2930001 chr2L_2930001 RAL-805 63 chr2L 2937415 2937451 chr2L 2937493 2937528 4 77 0.0 1.5 0.8 2.2 113 chr2L 2937415 intron lilli + chr2L 2937472 intron lilli + chr2L 2937528 intron lilli + chr2L_4_2935001 chr2L_2935001 RAL-805 64 chr2L 3049232 3049264 chr2L 3049318 3049350 10 86 2.5 2.0 2.2 3.1 118 chr2L 3049232 intron v(2)k05816 + chr2L 3049291 intron v(2)k05816 + chr2L 3049350 intron v(2)k05816 + chr2L_10_3045001 chr2L_3045001 RAL-805 65 chr2L 3071988 3072014 chr2L 3072066 3072092 11 78 1.5 4.5 3.0 2.8 104 chr2L 3071988 intron toc - chr2L 3072040 intron toc - chr2L 3072092 intron toc - chr2L_11_3070001 chr2L_3070001 RAL-805 66 chr2L 3073029 3073062 chr2L 3078232 3078265 copia 11 5203 4.0 0.5 2.2 3.4 5236 chr2L 3073029 intron toc - chr2L 3075647 intron toc - chr2L 3078265 intron toc - chr2L_11_3075001 chr2L_3075001 RAL-805 67 chr2L 3108867 3108899 chr2L 3108942 3108976 12 77 1.5 0.0 0.8 6.7 109 chr2L 3108867 intron toc - chr2L 3108922 intron toc - chr2L 3108976 intron toc - chr2L_12_3105001 chr2L_3105001 RAL-805 68 chr2L 3185100 3185104 chr2L 3185176 3185180 4 76 1.0 0.0 0.5 2.7 80 chr2L 3185100 intron CG34393 - chr2L 3185140 intron CG34393 - chr2L 3185180 intron CG34393 - chr2L_4_3185001 chr2L_3185001 RAL-805 69 chr2L 3192208 3192242 chr2L 3192319 3192353 18 110 1.5 3.5 2.5 5.1 145 chr2L 3192208 exon CG34393 - chr2L 3192280 intron CG34393 - chr2L 3192353 intron CG34393 - chr2L_18_3190001 chr2L_3190001 RAL-805 70 chr2L 3218890 3218920 chr2L 3219360 3219382 12 466 4.0 6.5 5.2 1.9 492 chr2L 3218890 intergenic not near genes chr2L 3219136 intergenic not near genes chr2L 3219382 intergenic not near genes chr2L_12_3215001 chr2L_3215001 RAL-805 71 chr2L 3251497 3251526 chr2L 3259062 3259091 springer 8 7565 2.5 4.5 3.5 1.8 7594 chr2L 3251497 intergenic not near genes chr2L 3255294 intergenic not near genes chr2L 3259091 intergenic not near genes chr2L_8_3255001 chr2L_3255001 RAL-805 72 chr2L 3312095 3312115 chr2L 3312199 3312220 5 104 0.0 0.5 0.2 4.2 125 chr2L 3312095 intron CG3277 + chr2L 3312158 intron CG3277 + chr2L 3312220 intron CG3277 + chr2L_5_3310001 chr2L_3310001 RAL-805 73 chr2L 3388603 3388613 chr2L 3388844 3388854 pogo 4 241 2.5 1.5 2.0 1.3 251 chr2L 3388603 intergenic CG42460 - chr2L 3388728 intergenic CG42460 - chr2L 3388854 intergenic CG42460 -,CR44791 + chr2L_4_3385001 chr2L_3385001 RAL-805 74 chr2L 3508347 3508376 chr2L 3508425 3508453 7 78 2.5 1.5 2.0 2.3 106 chr2L 3508347 intergenic tim -,CR45299 + chr2L 3508400 intergenic CR45299 +,tim - chr2L 3508453 intergenic CR45299 +,tim - chr2L_7_3505001 chr2L_3505001 RAL-805 75 chr2L 3523033 3523045 chr2L 3523145 3523158 4 111 2.5 0.5 1.5 1.6 125 chr2L 3523033 exon Sr-CIV - chr2L 3523096 intron Sr-CIV - chr2L 3523158 exon Sr-CIV - chr2L_4_3520001 chr2L_3520001 RAL-805 76 chr2L 3582880 3582901 chr2L 3582957 3582978 9 77 3.0 5.5 4.2 1.7 98 chr2L 3582880 intergenic not near genes chr2L 3582929 intergenic not near genes chr2L 3582978 intergenic not near genes chr2L_9_3580001 chr2L_3580001 RAL-805 77 chr2L 3584674 3584678 chr2L 3584750 3584755 4 76 9.0 0.0 4.5 0.7 81 chr2L 3584674 intergenic not near genes chr2L 3584714 intergenic not near genes chr2L 3584755 intergenic not near genes chr2L_4_3580001 chr2L_3580001 RAL-805 78 chr2L 3634101 3634131 chr2L 3634183 3634213 12 82 3.5 4.0 3.8 2.5 112 chr2L 3634101 intron for - chr2L 3634157 intron for - chr2L 3634213 intron for - chr2L_12_3630001 chr2L_3630001 RAL-805 79 chr2L 3646810 3646835 chr2L 3646892 3646917 17 82 5.0 3.5 4.2 3.3 107 chr2L 3646810 intron for - chr2L 3646864 intron for - chr2L 3646917 intron for - chr2L_17_3645001 chr2L_3645001 RAL-805 80 chr2L 3943793 3943826 chr2L 3943884 3943917 9 91 1.5 1.5 1.5 3.6 124 chr2L 3943793 intron fred - chr2L 3943855 intron fred - chr2L 3943917 intron fred - chr2L_9_3940001 chr2L_3940001 RAL-805 81 chr2L 3959189 3959201 chr2L 3959265 3959277 4 76 4.5 2.5 3.5 0.9 88 chr2L 3959189 intron fred - chr2L 3959233 intron fred - chr2L 3959277 intron fred - chr2L_4_3955001 chr2L_3955001 RAL-805 82 chr2L 4066033 4066063 chr2L 4068858 4068888 Juan 8 2825 8.5 3.0 5.8 1.2 2855 chr2L 4066033 intron ed + chr2L 4067460 intron ed + chr2L 4068888 intron ed + chr2L_8_4065001 chr2L_4065001 RAL-805 83 chr2L 4159409 4159417 chr2L 4159609 4159616 4 200 5.0 1.0 3.0 1.0 207 chr2L 4159409 intergenic not near genes chr2L 4159512 intergenic not near genes chr2L 4159616 intergenic not near genes chr2L_4_4155001 chr2L_4155001 RAL-805 84 chr2L 4166377 4166407 chr2L 4166460 4166490 4 83 3.5 1.5 2.5 1.1 113 chr2L 4166377 intergenic Or24a - chr2L 4166434 intergenic Or24a - chr2L 4166490 intergenic Or24a - chr2L_4_4165001 chr2L_4165001 RAL-805 85 chr2L 4181295 4181304 chr2L 4183926 4183936 Burdock 4 2632 2.5 4.0 3.2 1.0 2641 chr2L 4181295 intergenic not near genes chr2L 4182616 intergenic not near genes chr2L 4183936 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-805 86 chr2L 4224393 4224412 chr2L 4224472 4224491 5 78 0.0 2.5 1.2 2.3 98 chr2L 4224393 intergenic CG3702 - chr2L 4224442 intergenic CG3702 - chr2L 4224491 intergenic CG3702 - chr2L_5_4220001 chr2L_4220001 RAL-805 87 chr2L 4386137 4386154 chr2L 4386243 4386261 4 107 1.5 3.0 2.2 1.2 124 chr2L 4386137 intergenic Psf2 -,CG3338 - chr2L 4386199 3` UTR Psf2 - chr2L 4386261 3` UTR Psf2 - chr2L_4_4385001 chr2L_4385001 RAL-805 88 chr2L 4571857 4571867 chr2L 4571942 4571952 5 85 4.5 0.0 2.2 1.6 95 chr2L 4571857 intron dp - chr2L 4571904 intron dp - chr2L 4571952 intron dp - chr2L_5_4570001 chr2L_4570001 RAL-805 89 chr2L 4576621 4576636 chr2L 4576856 4576874 7 238 0.0 5.0 2.5 2.0 253 chr2L 4576621 intron dp - chr2L 4576748 intron dp - chr2L 4576874 intron dp - chr2L_7_4575001 chr2L_4575001 RAL-805 90 chr2L 4601704 4601725 chr2L 4609145 4609166 mdg1 7 7441 6.0 3.5 4.8 1.2 7462 chr2L 4601704 intron dp - chr2L 4605435 intron dp - chr2L 4609166 intron dp - chr2L_7_4605001 chr2L_4605001 RAL-805 91 chr2L 4661843 4661851 chr2L 4669423 4669431 opus 4 7580 1.5 4.5 3.0 1.0 7588 chr2L 4661843 intergenic not near genes chr2L 4665637 intergenic not near genes chr2L 4669431 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-805 92 chr2L 4676425 4676455 chr2L 4676772 4676805 7 349 3.5 1.5 2.5 2.0 380 chr2L 4676425 intergenic not near genes chr2L 4676615 intergenic not near genes chr2L 4676805 intergenic not near genes chr2L_7_4675001 chr2L_4675001 RAL-805 93 chr2L 4710347 4710375 chr2L 4710428 4710458 5 82 3.0 2.5 2.8 1.3 111 chr2L 4710347 intron CG34351 + chr2L 4710402 intron CG34351 + chr2L 4710458 intron CG34351 + chr2L_5_4710001 chr2L_4710001 RAL-805 94 chr2L 4819495 4819519 chr2L 4819617 4819641 8 122 2.0 3.0 2.5 2.3 146 chr2L 4819495 intergenic not near genes chr2L 4819568 intergenic not near genes chr2L 4819641 intergenic not near genes chr2L_8_4815001 chr2L_4815001 RAL-805 95 chr2L 4853720 4853747 chr2L 4853947 4853976 7 228 1.5 1.5 1.5 2.8 256 chr2L 4853720 intron pog + chr2L 4853848 intron pog + chr2L 4853976 intron pog + chr2L_7_4850001 chr2L_4850001 RAL-805 96 chr2L 4953524 4953542 chr2L 4953765 4953783 pogo 6 241 3.0 2.5 2.8 1.6 259 chr2L 4953524 intergenic Jon25Bii - chr2L 4953654 intergenic not near genes chr2L 4953783 intergenic Jon25Bi - chr2L_6_4950001 chr2L_4950001 RAL-805 97 chr2L 5005893 5005921 chr2L 5005972 5006000 5 78 5.0 1.0 3.0 1.2 107 chr2L 5005893 intron Rtnl1 - chr2L 5005946 intron Rtnl1 - chr2L 5006000 intron Rtnl1 - chr2L_5_5005001 chr2L_5005001 RAL-805 98 chr2L 5085067 5085070 chr2L 5085146 5085148 4 78 0.0 2.0 1.0 2.0 81 chr2L 5085067 intron pgant5 - chr2L 5085108 intron pgant5 - chr2L 5085148 intron pgant5 - chr2L_4_5085001 chr2L_5085001 RAL-805 99 chr2L 5092414 5092439 chr2L 5092501 5092526 6 87 2.5 2.0 2.2 1.9 112 chr2L 5092414 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092526 intron pgant5 - chr2L_6_5090001 chr2L_5090001 RAL-805 100 chr2L 5117299 5117317 chr2L 5117381 5117399 4 80 3.5 1.0 2.2 1.2 100 chr2L 5117299 intron Msp300 + chr2L 5117349 intron Msp300 + chr2L 5117399 intron Msp300 + chr2L_4_5115001 chr2L_5115001 RAL-805 101 chr2L 5120974 5121006 chr2L 5121068 5121100 9 94 2.5 3.0 2.8 2.4 126 chr2L 5120974 intron Msp300 + chr2L 5121037 intron Msp300 + chr2L 5121100 intron Msp300 + chr2L_9_5120001 chr2L_5120001 RAL-805 102 chr2L 5147739 5147756 chr2L 5147966 5147988 6 231 3.5 7.0 5.2 1.0 249 chr2L 5147739 intron Msp300 + chr2L 5147864 intron Msp300 + chr2L 5147988 intron Msp300 + chr2L_6_5145001 chr2L_5145001 RAL-805 103 chr2L 5342780 5342794 chr2L 5345160 5345174 Doc 4 2380 5.0 2.5 3.8 0.8 2394 chr2L 5342780 intergenic not near genes chr2L 5343977 intergenic not near genes chr2L 5345174 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-805 104 chr2L 5455414 5455444 chr2L 5455496 5455526 10 82 4.5 1.0 2.8 2.6 112 chr2L 5455414 intergenic not near genes chr2L 5455470 intergenic not near genes chr2L 5455526 intergenic not near genes chr2L_10_5455001 chr2L_5455001 RAL-805 105 chr2L 5492031 5492040 chr2L 5492109 5492118 4 78 1.5 4.0 2.8 1.1 87 chr2L 5492031 intergenic not near genes chr2L 5492074 intergenic not near genes chr2L 5492118 intergenic not near genes chr2L_4_5490001 chr2L_5490001 RAL-805 106 chr2L 5516659 5516676 chr2L 5516738 5516755 5 79 1.5 2.0 1.8 1.8 96 chr2L 5516659 intergenic not near genes chr2L 5516707 intergenic not near genes chr2L 5516755 intergenic not near genes chr2L_5_5515001 chr2L_5515001 RAL-805 107 chr2L 5686382 5686394 chr2L 5686485 5686497 5 103 2.5 0.0 1.2 2.3 115 chr2L 5686382 intergenic not near genes chr2L 5686440 intergenic not near genes chr2L 5686497 intergenic not near genes chr2L_5_5685001 chr2L_5685001 RAL-805 108 chr2L 5698141 5698171 chr2L 5698251 5698280 6 110 3.5 2.5 3.0 1.5 139 chr2L 5698141 intergenic not near genes chr2L 5698210 intergenic not near genes chr2L 5698280 intergenic not near genes chr2L_6_5695001 chr2L_5695001 RAL-805 109 chr2L 5819674 5819708 chr2L 5819758 5819792 9 83 2.0 2.0 2.0 3.0 118 chr2L 5819674 intergenic not near genes chr2L 5819733 intergenic not near genes chr2L 5819792 intergenic not near genes chr2L_9_5815001 chr2L_5815001 RAL-805 110 chr2L 5820392 5820425 chr2L 5820548 5820581 13 155 1.5 3.0 2.2 4.1 189 chr2L 5820392 intergenic not near genes chr2L 5820486 intergenic not near genes chr2L 5820581 intergenic not near genes chr2L_13_5820001 chr2L_5820001 RAL-805 111 chr2L 5827710 5827740 chr2L 5836718 5836748 roo 7 9004 5.0 7.5 6.2 1.0 9038 chr2L 5827710 intron TrissinR + chr2L 5832229 intron TrissinR + chr2L 5836748 intron TrissinR + chr2L_7_5830001 chr2L_5830001 RAL-805 112 chr2L 5878751 5878785 chr2L 5878827 5878861 16 73 2.0 4.5 3.2 3.8 110 chr2L 5878751 intron rau - chr2L 5878806 intron rau - chr2L 5878861 intron rau - chr2L_16_5875001 chr2L_5875001 RAL-805 113 chr2L 5931502 5931529 chr2L 5931586 5931613 7 84 3.0 3.0 3.0 1.8 111 chr2L 5931502 intron dsf + chr2L 5931558 intron dsf + chr2L 5931613 intron dsf + chr2L_7_5930001 chr2L_5930001 RAL-805 114 chr2L 6002439 6002465 chr2L 6002525 6002551 4 85 0.5 2.5 1.5 1.6 112 chr2L 6002439 3` UTR Tsp26A + chr2L 6002495 3` UTR Tsp26A + chr2L 6002551 3` UTR Tsp26A + chr2L_4_6000001 chr2L_6000001 RAL-805 115 chr2L 6050444 6050465 chr2L 6050547 6050568 9 104 1.0 2.0 1.5 3.6 124 chr2L 6050444 intergenic CG12393 +,CG9135 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050568 intergenic CG12393 +,CG9135 + chr2L_9_6050001 chr2L_6050001 RAL-805 116 chr2L 6136573 6136580 chr2L 6136670 6136677 5 97 0.0 6.5 3.2 1.2 104 chr2L 6136573 intergenic not near genes chr2L 6136625 intergenic not near genes chr2L 6136677 intergenic not near genes chr2L_5_6135001 chr2L_6135001 RAL-805 117 chr2L 6185449 6185463 chr2L 6185517 6185539 7 75 5.0 3.0 4.0 1.4 90 chr2L 6185449 intron CG34380 + chr2L 6185494 intron CG34380 + chr2L 6185539 intron CG34380 + chr2L_7_6185001 chr2L_6185001 RAL-805 118 chr2L 6268527 6268547 chr2L 6268613 6268633 6 86 1.0 1.0 1.0 3.0 106 chr2L 6268527 intron Ddr + chr2L 6268580 intron Ddr + chr2L 6268633 intron Ddr + chr2L_6_6265001 chr2L_6265001 RAL-805 119 chr2L 6308313 6308342 chr2L 6308396 6308424 12 83 3.0 3.5 3.2 2.9 111 chr2L 6308313 intron Ddr + chr2L 6308368 intron Ddr + chr2L 6308424 intron,3` UTR Ddr +,CG43922 - chr2L_12_6305001 chr2L_6305001 RAL-805 120 chr2L 6346085 6346121 chr2L 6349448 6349484 8 3364 22.5 16.5 19.5 0.4 3399 chr2L 6346085 3` UTR Cpr + chr2L 6347784 intron CG9497 - chr2L 6349484 3` UTR CG9498 - chr2L_8_6345001 chr2L_6345001 RAL-805 121 chr2L 6363158 6363182 chr2L 6366072 6366099 Burdock 5 2917 1.0 3.5 2.2 1.6 2941 chr2L 6363158 intergenic not near genes chr2L 6364628 intergenic not near genes chr2L 6366099 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-805 122 chr2L 6387033 6387049 chr2L 6387188 6387204 5 155 4.0 2.5 3.2 1.2 171 chr2L 6387033 intron CG42368 - chr2L 6387118 intron CG42368 - chr2L 6387204 intron CG42368 - chr2L_5_6385001 chr2L_6385001 RAL-805 123 chr2L 6426854 6426886 chr2L 6445114 6445146 roo 12 18260 5.0 4.5 4.8 2.1 18292 chr2L 6426854 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445146 exon CG9527 - chr2L_12_6435001 chr2L_6435001 RAL-805 124 chr2L 6564843 6564878 chr2L 6564936 6564971 7 93 1.5 1.5 1.5 2.8 128 chr2L 6564843 3` UTR CG13766 - chr2L 6564907 3` UTR CG13766 - chr2L 6564971 3` UTR CG13766 - chr2L_7_6560001 chr2L_6560001 RAL-805 125 chr2L 6626884 6626918 chr2L 6626969 6626999 10 85 5.0 1.5 3.2 2.4 115 chr2L 6626884 intron Oatp26F - chr2L 6626942 intron Oatp26F - chr2L 6626999 intron Oatp26F - chr2L_10_6625001 chr2L_6625001 RAL-805 126 chr2L 6629226 6629257 chr2L 6629325 6629356 9 99 2.5 1.5 2.0 3.0 130 chr2L 6629226 intron Oatp26F - chr2L 6629291 intron Oatp26F - chr2L 6629356 intron Oatp26F - chr2L_9_6625001 chr2L_6625001 RAL-805 127 chr2L 6655527 6655542 chr2L 6655888 6655904 5 361 3.5 2.0 2.8 1.3 377 chr2L 6655527 exon CG31633 - chr2L 6655716 exon CG31633 - chr2L 6655904 exon CG31633 - chr2L_5_6655001 chr2L_6655001 RAL-805 128 chr2L 6728738 6728766 chr2L 6728822 6728849 8 84 0.5 2.0 1.2 3.6 111 chr2L 6728738 exon Liprin-alpha + chr2L 6728794 intron Liprin-alpha + chr2L 6728849 intron Liprin-alpha + chr2L_8_6725001 chr2L_6725001 RAL-805 129 chr2L 6767470 6767507 chr2L 6767556 6767593 17 85 2.5 2.0 2.2 5.3 123 chr2L 6767470 exon CG11321 - chr2L 6767532 exon CG11321 - chr2L 6767593 exon CG11321 - chr2L_17_6765001 chr2L_6765001 RAL-805 130 chr2L 6799535 6799568 chr2L 6799623 6799656 8 88 0.5 1.0 0.8 4.4 121 chr2L 6799535 5` UTR CR43610 + chr2L 6799596 5` UTR CR43610 + chr2L 6799656 intergenic CR43610 +,CG17376 - chr2L_8_6795001 chr2L_6795001 RAL-805 131 chr2L 6812013 6812037 chr2L 6812217 6812240 8 204 4.0 2.0 3.0 2.0 227 chr2L 6812013 intergenic not near genes chr2L 6812126 intergenic not near genes chr2L 6812240 intergenic CR44081 + chr2L_8_6810001 chr2L_6810001 RAL-805 132 chr2L 6876788 6876807 chr2L 6882963 6882996 diver 5 6187 4.0 2.0 3.0 1.2 6208 chr2L 6876788 intron Nlg2 + chr2L 6879892 intron Nlg2 + chr2L 6882996 intron Nlg2 + chr2L_5_6875001 chr2L_6875001 RAL-805 133 chr2L 7082889 7082893 chr2L 7082976 7082980 4 87 4.5 5.5 5.0 0.7 91 chr2L 7082889 intron Pvf2 - chr2L 7082934 intron Pvf2 - chr2L 7082980 intron Pvf2 - chr2L_4_7080001 chr2L_7080001 RAL-805 134 chr2L 7111769 7111780 chr2L 7111853 7111865 4 84 1.5 0.0 0.8 2.2 96 chr2L 7111769 intron Pvf3 - chr2L 7111817 intron Pvf3 - chr2L 7111865 intron Pvf3 - chr2L_4_7110001 chr2L_7110001 RAL-805 135 chr2L 7166340 7166347 chr2L 7170088 7170123 16 3750 20.0 25.5 22.8 0.7 3783 chr2L 7166340 intergenic not near genes chr2L 7168232 intergenic not near genes chr2L 7170123 intergenic not near genes chr2L_16_7165001 chr2L_7165001 RAL-805 136 chr2L 7177385 7177410 chr2L 7177477 7177500 7 92 3.0 0.5 1.8 2.5 115 chr2L 7177385 intergenic CR44613 - chr2L 7177442 intergenic CR44613 - chr2L 7177500 intergenic CR44613 - chr2L_7_7175001 chr2L_7175001 RAL-805 137 chr2L 7198003 7198016 chr2L 7198082 7198095 5 79 3.5 5.5 4.5 0.9 92 chr2L 7198003 intron CG4502 - chr2L 7198049 intron CG4502 - chr2L 7198095 intron CG4502 - chr2L_5_7195001 chr2L_7195001 RAL-805 138 chr2L 7325919 7325944 chr2L 7325996 7326029 9 84 4.5 3.0 3.8 1.9 110 chr2L 7325919 intergenic not near genes chr2L 7325974 intergenic not near genes chr2L 7326029 intergenic not near genes chr2L_9_7325001 chr2L_7325001 RAL-805 139 chr2L 7343342 7343359 chr2L 7350458 7350474 roo 4 7116 5.0 4.0 4.5 0.7 7132 chr2L 7343342 intron Wnt6 + chr2L 7346908 intron Wnt6 + chr2L 7350474 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-805 140 chr2L 7360296 7360330 chr2L 7360421 7360433 10 120 2.0 1.0 1.5 4.0 137 chr2L 7360296 intergenic not near genes chr2L 7360364 intergenic not near genes chr2L 7360433 intergenic not near genes chr2L_10_7360001 chr2L_7360001 RAL-805 141 chr2L 7377891 7377902 chr2L 7377988 7377999 5 97 0.0 3.0 1.5 2.0 108 chr2L 7377891 intron ninaC + chr2L 7377945 intron ninaC + chr2L 7377999 intron ninaC + chr2L_5_7375001 chr2L_7375001 RAL-805 142 chr2L 7399311 7399325 chr2L 7399684 7399698 5 373 1.0 5.5 3.2 1.2 387 chr2L 7399311 intergenic not near genes chr2L 7399504 intergenic not near genes chr2L 7399698 intergenic not near genes chr2L_5_7395001 chr2L_7395001 RAL-805 143 chr2L 7436202 7436215 chr2L 7436296 7436308 5 94 2.0 1.5 1.8 1.8 106 chr2L 7436202 intergenic not near genes chr2L 7436255 intergenic not near genes chr2L 7436308 intergenic not near genes chr2L_5_7435001 chr2L_7435001 RAL-805 144 chr2L 7487296 7487320 chr2L 7487370 7487374 9 72 6.0 3.0 4.5 1.6 78 chr2L 7487296 intron Ziz - chr2L 7487335 intron Ziz - chr2L 7487374 intron Ziz - chr2L_9_7485001 chr2L_7485001 RAL-805 145 chr2L 7609533 7609740 chr2L 7609628 7609817 4 86 1.0 0.0 0.5 2.7 284 chr2L 7609533 intron CG6739 + chr2L 7609675 intron CG6739 + chr2L 7609817 intron CG6739 + chr2L_4_7605001 chr2L_7605001 RAL-805 146 chr2L 7702541 7702566 chr2L 7702633 7702655 7 91 0.5 5.0 2.8 1.8 114 chr2L 7702541 intergenic Tep3 + chr2L 7702598 intergenic Tep3 + chr2L 7702655 intergenic Tep3 + chr2L_7_7700001 chr2L_7700001 RAL-805 147 chr2L 7759239 7759251 chr2L 7759320 7759332 6 81 1.0 2.0 1.5 2.4 93 chr2L 7759239 intron CG7196 + chr2L 7759286 intron CG7196 + chr2L 7759332 intron CG7196 + chr2L_6_7755001 chr2L_7755001 RAL-805 148 chr2L 7795674 7795699 chr2L 7797348 7797373 8 1674 23.0 13.5 18.2 0.4 1699 chr2L 7795674 intron LKR - chr2L 7796524 3` UTR Herp - chr2L 7797373 intron Herp - chr2L_8_7795001 chr2L_7795001 RAL-805 149 chr2L 7959040 7959065 chr2L 7960451 7960476 pogo 12 1411 1.5 0.0 0.8 6.7 1436 chr2L 7959040 intron Snoo - chr2L 7959758 intron Snoo - chr2L 7960476 intron Snoo - chr2L_12_7955001 chr2L_7955001 RAL-805 150 chr2L 7977082 7977113 chr2L 7984056 7984087 297 7 6974 2.0 5.0 3.5 1.6 7005 chr2L 7977082 intron Snoo - chr2L 7980584 intron Snoo - chr2L 7984087 intron,5` UTR Snoo -,CG7231 + chr2L_7_7980001 chr2L_7980001 RAL-805 151 chr2L 8013620 8013629 chr2L 8018825 8018834 copia 5 5205 5.0 0.0 2.5 1.4 5214 chr2L 8013620 intron Tg + chr2L 8016227 intron Tg + chr2L 8018834 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-805 152 chr2L 8044101 8044122 chr2L 8044179 8044201 11 78 1.5 1.5 1.5 4.4 100 chr2L 8044101 intron CG7466 + chr2L 8044151 intron CG7466 + chr2L 8044201 intron CG7466 + chr2L_11_8040001 chr2L_8040001 RAL-805 153 chr2L 8164583 8164618 chr2L 8164664 8164700 12 81 4.0 3.5 3.8 2.5 117 chr2L 8164583 intron Piezo + chr2L 8164642 intron Piezo + chr2L 8164700 intron Piezo + chr2L_12_8160001 chr2L_8160001 RAL-805 154 chr2L 8244734 8244749 chr2L 8244856 8244871 6 122 0.5 4.0 2.2 1.9 137 chr2L 8244734 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244871 intron CG8086 - chr2L_6_8240001 chr2L_8240001 RAL-805 155 chr2L 8336934 8336966 chr2L 8337013 8337045 10 78 2.0 3.5 2.8 2.6 111 chr2L 8336934 intergenic not near genes chr2L 8336990 intergenic not near genes chr2L 8337045 intergenic not near genes chr2L_10_8335001 chr2L_8335001 RAL-805 156 chr2L 8443664 8443839 chr2L 8443812 8443985 4 147 14.0 8.0 11.0 0.3 321 chr2L 8443664 exon CG31897 + chr2L 8443824 exon CG31897 + chr2L 8443985 exon CG31897 + chr2L_4_8440001 chr2L_8440001 RAL-805 157 chr2L 8452419 8452448 chr2L 8461590 8461619 roo 10 9168 5.5 3.5 4.5 1.8 9200 chr2L 8452419 intron fu12 - chr2L 8457019 intron fu12 - chr2L 8461619 intron fu12 - chr2L_10_8455001 chr2L_8455001 RAL-805 158 chr2L 8508992 8509002 chr2L 8509093 8509104 4 102 0.0 1.0 0.5 2.7 112 chr2L 8508992 intergenic CG13096 - chr2L 8509048 intergenic CG13096 - chr2L 8509104 3` UTR CG13096 - chr2L_4_8505001 chr2L_8505001 RAL-805 159 chr2L 8594467 8594496 chr2L 8601521 8601550 297 6 7048 2.5 1.0 1.8 2.1 7083 chr2L 8594467 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598008 intron Sema-1a + chr2L 8601550 intron Sema-1a + chr2L_6_8595001 chr2L_8595001 RAL-805 160 chr2L 8612856 8612869 chr2L 8612933 8612946 5 77 1.0 6.5 3.8 1.0 90 chr2L 8612856 intron Sema-1a + chr2L 8612901 intron Sema-1a + chr2L 8612946 intron Sema-1a + chr2L_5_8610001 chr2L_8610001 RAL-805 161 chr2L 8629265 8629289 chr2L 8629343 8629366 8 78 2.5 4.0 3.2 1.9 101 chr2L 8629265 intron Sema-1a + chr2L 8629316 intron Sema-1a + chr2L 8629366 intron Sema-1a + chr2L_8_8625001 chr2L_8625001 RAL-805 162 chr2L 8665232 8665265 chr2L 8665311 8665345 10 80 2.0 0.0 1.0 5.0 113 chr2L 8665232 intron Sema-1a + chr2L 8665288 intron Sema-1a + chr2L 8665345 intron Sema-1a + chr2L_10_8665001 chr2L_8665001 RAL-805 163 chr2L 8723114 8723141 chr2L 8731491 8731518 Tirant 7 8377 3.5 3.0 3.2 1.7 8404 chr2L 8723114 intron raw - chr2L 8727316 intron raw - chr2L 8731518 intron raw - chr2L_7_8725001 chr2L_8725001 RAL-805 164 chr2L 8742771 8742939 chr2L 8742847 8743017 5 76 0.0 0.0 0.0 5.0 246 chr2L 8742771 intergenic not near genes chr2L 8742894 intergenic not near genes chr2L 8743017 intergenic not near genes chr2L_5_8740001 chr2L_8740001 RAL-805 165 chr2L 8795002 8795035 chr2L 8795091 8795124 12 88 1.5 2.5 2.0 4.0 122 chr2L 8795002 intergenic not near genes chr2L 8795063 intergenic not near genes chr2L 8795124 intergenic not near genes chr2L_12_8795001 chr2L_8795001 RAL-805 166 chr2L 8939671 8939694 chr2L 8939751 8939774 5 79 2.5 2.5 2.5 1.4 103 chr2L 8939671 3` UTR Tsp29Fb + chr2L 8939722 3` UTR Tsp29Fb + chr2L 8939774 intergenic CG9510 -,Tsp29Fb + chr2L_5_8935001 chr2L_8935001 RAL-805 167 chr2L 8956223 8956243 chr2L 8956300 8956320 4 77 0.5 0.0 0.2 3.3 97 chr2L 8956223 intron CG31886 - chr2L 8956272 intron CG31886 - chr2L 8956320 intron CG31886 - chr2L_4_8955001 chr2L_8955001 RAL-805 168 chr2L 9000278 9000300 chr2L 9007788 9007810 roo 10 7509 4.0 3.0 3.5 2.2 7532 chr2L 9000278 intergenic Try29F + chr2L 9004044 intergenic not near genes chr2L 9007810 intergenic not near genes chr2L_10_9000001 chr2L_9000001 RAL-805 169 chr2L 9025825 9025854 chr2L 9025907 9025938 7 82 4.0 5.0 4.5 1.3 113 chr2L 9025825 intron,3` UTR CG9582 -,CR44352 - chr2L 9025882 intron,3` UTR CG9582 -,CR44352 - chr2L 9025938 intron,3` UTR CG9582 -,CR44352 - chr2L_7_9025001 chr2L_9025001 RAL-805 170 chr2L 9084336 9084340 chr2L 16217660 16217660 10 7133322 16.5 16.0 16.2 0.6 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-805 171 chr2L 9095571 9095606 chr2L 9095658 9095693 12 86 1.0 2.0 1.5 4.8 122 chr2L 9095571 intergenic not near genes chr2L 9095632 intergenic not near genes chr2L 9095693 intergenic not near genes chr2L_12_9095001 chr2L_9095001 RAL-805 172 chr2L 9173072 9173094 chr2L 9173149 9173171 5 76 1.0 1.5 1.2 2.3 99 chr2L 9173072 intron tai + chr2L 9173122 intron tai + chr2L 9173171 intron tai + chr2L_5_9170001 chr2L_9170001 RAL-805 173 chr2L 9217970 9218004 chr2L 9222756 9222791 Doc 7 4787 2.5 0.0 1.2 3.2 4821 chr2L 9217970 intron tai + chr2L 9220380 intron tai + chr2L 9222791 intron tai + chr2L_7_9220001 chr2L_9220001 RAL-805 174 chr2L 9297378 9297405 chr2L 9297454 9297482 11 76 4.5 4.0 4.2 2.1 104 chr2L 9297378 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297482 3` UTR Ggamma30A + chr2L_11_9295001 chr2L_9295001 RAL-805 175 chr2L 9303227 9303525 chr2L 9303311 9303605 10 81 3.0 7.5 5.2 1.6 378 chr2L 9303227 intergenic not near genes chr2L 9303416 intergenic not near genes chr2L 9303605 intergenic not near genes chr2L_10_9300001 chr2L_9300001 RAL-805 176 chr2L 9391544 9391567 chr2L 9391668 9391691 7 124 3.0 3.0 3.0 1.8 147 chr2L 9391544 intron,3` UTR Shawl -,Aldh + chr2L 9391618 intron Shawl - chr2L 9391691 intron Shawl - chr2L_7_9390001 chr2L_9390001 RAL-805 177 chr2L 9393505 9393525 chr2L 9396471 9396492 jockey 11 2966 3.0 4.0 3.5 2.4 2987 chr2L 9393505 intron Shawl - chr2L 9394998 intron Shawl - chr2L 9396492 intron Shawl - chr2L_11_9390001 chr2L_9390001 RAL-805 178 chr2L 9423185 9423208 chr2L 9423263 9423286 6 78 3.5 0.5 2.0 2.0 101 chr2L 9423185 intron Mco1 + chr2L 9423236 intron Mco1 + chr2L 9423286 intron Mco1 + chr2L_6_9420001 chr2L_9420001 RAL-805 179 chr2L 9439624 9439644 chr2L 9439701 9439722 5 78 0.5 1.0 0.8 2.8 98 chr2L 9439624 intron numb + chr2L 9439673 intron numb + chr2L 9439722 intron numb + chr2L_5_9435001 chr2L_9435001 RAL-805 180 chr2L 9439943 9439953 chr2L 9440031 9440042 4 89 2.5 0.5 1.5 1.6 99 chr2L 9439943 intron numb + chr2L 9439992 intron numb + chr2L 9440042 intron,exon numb +,CG33723 - chr2L_4_9435001 chr2L_9435001 RAL-805 181 chr2L 9454981 9454998 chr2L 9455083 9455100 4 102 3.5 2.5 3.0 1.0 119 chr2L 9454981 intron numb + chr2L 9455040 intron numb + chr2L 9455100 intron numb + chr2L_4_9455001 chr2L_9455001 RAL-805 182 chr2L 9457077 9457104 chr2L 9457153 9457181 16 77 3.5 6.0 4.8 2.8 104 chr2L 9457077 intron numb + chr2L 9457129 intron numb + chr2L 9457181 intron numb + chr2L_16_9455001 chr2L_9455001 RAL-805 183 chr2L 9506424 9506457 chr2L 9506574 9506607 12 150 2.5 1.0 1.8 4.3 183 chr2L 9506424 intron CG33298 + chr2L 9506516 intron CG33298 + chr2L 9506607 intron CG33298 + chr2L_12_9505001 chr2L_9505001 RAL-805 184 chr2L 9770770 9770774 chr2L 9770867 9770871 4 96 7.0 4.5 5.8 0.6 101 chr2L 9770770 intron ppk18 - chr2L 9770820 intron ppk18 - chr2L 9770871 intron ppk18 - chr2L_4_9770001 chr2L_9770001 RAL-805 185 chr2L 9829589 9829597 chr2L 9829791 9829799 4 202 3.0 3.5 3.2 1.0 210 chr2L 9829589 intron nAChRalpha6 - chr2L 9829694 intron nAChRalpha6 - chr2L 9829799 intron nAChRalpha6 - chr2L_4_9825001 chr2L_9825001 RAL-805 186 chr2L 9881007 9881040 chr2L 9881085 9881107 5 76 4.0 3.5 3.8 1.0 100 chr2L 9881007 intron nAChRalpha6 - chr2L 9881057 intron nAChRalpha6 - chr2L 9881107 intron nAChRalpha6 - chr2L_5_9880001 chr2L_9880001 RAL-805 187 chr2L 9892501 9892533 chr2L 9892577 9892609 9 76 2.0 3.5 2.8 2.4 108 chr2L 9892501 intron mtDNA-helicase - chr2L 9892555 intron mtDNA-helicase - chr2L 9892609 intron mtDNA-helicase - chr2L_9_9890001 chr2L_9890001 RAL-805 188 chr2L 9973724 9973758 chr2L 9980843 9980873 HMS-Beagle 11 7118 4.5 4.5 4.5 2.0 7149 chr2L 9973724 intergenic not near genes chr2L 9977298 intergenic not near genes chr2L 9980873 intergenic not near genes chr2L_11_9975001 chr2L_9975001 RAL-805 189 chr2L 9986351 9986369 chr2L 9986446 9986464 4 93 4.0 5.5 4.8 0.7 113 chr2L 9986351 intron bib + chr2L 9986408 intron bib + chr2L 9986464 intron bib + chr2L_4_9985001 chr2L_9985001 RAL-805 190 chr2L 10045420 10045428 chr2L 10045500 10045508 4 80 3.5 5.5 4.5 0.7 88 chr2L 10045420 intergenic not near genes chr2L 10045464 intergenic not near genes chr2L 10045508 intergenic not near genes chr2L_4_10045001 chr2L_10045001 RAL-805 191 chr2L 10051725 10051753 chr2L 10051809 10051833 13 82 2.5 3.5 3.0 3.2 108 chr2L 10051725 5` UTR CR44874 + chr2L 10051779 5` UTR CR44874 + chr2L 10051833 5` UTR CR44874 + chr2L_13_10050001 chr2L_10050001 RAL-805 192 chr2L 10156325 10156349 chr2L 10163795 10163815 blood 11 7469 3.0 3.0 3.0 2.8 7490 chr2L 10156325 intron,3` UTR CG44153 -,CG4839 + chr2L 10160070 intron CG44153 - chr2L 10163815 intron CG44153 - chr2L_11_10160001 chr2L_10160001 RAL-805 193 chr2L 10177904 10177930 chr2L 10177984 10178010 10 80 1.5 3.0 2.2 3.1 106 chr2L 10177904 intron CG44153 - chr2L 10177957 intron CG44153 - chr2L 10178010 intron CG44153 - chr2L_10_10175001 chr2L_10175001 RAL-805 194 chr2L 10191457 10191494 chr2L 10191540 10191577 4 83 1.5 2.0 1.8 1.4 120 chr2L 10191457 intron,5` UTR Sur -,CG31874 - chr2L 10191517 intron Sur - chr2L 10191577 intron Sur - chr2L_4_10190001 chr2L_10190001 RAL-805 195 chr2L 10209849 10209857 chr2L 10209926 10209934 4 77 2.0 0.0 1.0 2.0 85 chr2L 10209849 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209892 3` UTR CG5727 - chr2L 10209934 3` UTR CG5727 - chr2L_4_10205001 chr2L_10205001 RAL-805 196 chr2L 10232934 10232943 chr2L 10233012 10233021 6 77 1.0 1.5 1.2 2.7 87 chr2L 10232934 intron eEF1delta + chr2L 10232978 intron eEF1delta + chr2L 10233021 intron eEF1delta + chr2L_6_10230001 chr2L_10230001 RAL-805 197 chr2L 10258914 10258946 chr2L 10259016 10259048 9 99 5.5 6.0 5.8 1.3 134 chr2L 10258914 exon Pten - chr2L 10258981 intron Pten - chr2L 10259048 exon Pten - chr2L_9_10255001 chr2L_10255001 RAL-805 198 chr2L 10294179 10294196 chr2L 10294255 10294272 4 76 0.5 2.0 1.2 1.8 93 chr2L 10294179 intron Hand - chr2L 10294226 intron Hand - chr2L 10294272 intron Hand - chr2L_4_10290001 chr2L_10290001 RAL-805 199 chr2L 10407754 10407773 chr2L 10407835 10407854 5 81 0.5 4.0 2.2 1.6 100 chr2L 10407754 intron Ir31a + chr2L 10407804 intron Ir31a + chr2L 10407854 exon Ir31a + chr2L_5_10405001 chr2L_10405001 RAL-805 200 chr2L 10490278 10490309 chr2L 10490359 10490391 8 82 3.0 1.0 2.0 2.7 113 chr2L 10490278 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490334 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490391 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_8_10490001 chr2L_10490001 RAL-805 201 chr2L 10515368 10515382 chr2L 10515461 10515475 4 93 1.5 1.0 1.2 1.8 107 chr2L 10515368 intron,intron CG45083 -,Fatp - chr2L 10515422 intron,intron CG45083 -,Fatp - chr2L 10515475 intron,intron CG45083 -,Fatp - chr2L_4_10515001 chr2L_10515001 RAL-805 202 chr2L 10563911 10563944 chr2L 10564004 10564037 10 92 1.0 2.5 1.8 3.6 126 chr2L 10563911 intron Trim9 + chr2L 10563974 intron Trim9 + chr2L 10564037 intron Trim9 + chr2L_10_10560001 chr2L_10560001 RAL-805 203 chr2L 10572705 10572735 chr2L 10572786 10572816 10 81 7.5 4.5 6.0 1.4 111 chr2L 10572705 intron Trim9 + chr2L 10572760 intron Trim9 + chr2L 10572816 intron Trim9 + chr2L_10_10570001 chr2L_10570001 RAL-805 204 chr2L 10862848 10862877 chr2L 10864458 10864485 Rt1c 15 1611 1.5 2.5 2.0 5.0 1637 chr2L 10862848 3` UTR CR43807 - chr2L 10863666 intron CR43807 - chr2L 10864485 3` UTR CR43807 - chr2L_15_10860001 chr2L_10860001 RAL-805 205 chr2L 10905616 10905630 chr2L 10905703 10905717 6 87 0.0 4.0 2.0 2.0 101 chr2L 10905616 intergenic not near genes chr2L 10905666 intergenic not near genes chr2L 10905717 intergenic not near genes chr2L_6_10905001 chr2L_10905001 RAL-805 206 chr2L 10919797 10919828 chr2L 10919886 10919917 7 89 4.5 2.5 3.5 1.6 120 chr2L 10919797 intron dpr2 - chr2L 10919857 intron dpr2 - chr2L 10919917 intron dpr2 - chr2L_7_10915001 chr2L_10915001 RAL-805 207 chr2L 10945091 10945106 chr2L 10945168 10945183 8 76 3.5 6.0 4.8 1.4 92 chr2L 10945091 intron dpr2 - chr2L 10945137 intron dpr2 - chr2L 10945183 intron dpr2 - chr2L_8_10945001 chr2L_10945001 RAL-805 208 chr2L 10946951 10946964 chr2L 10956166 10956178 roo 4 9214 7.0 5.5 6.2 0.6 9227 chr2L 10946951 intron dpr2 - chr2L 10951564 intron dpr2 - chr2L 10956178 intron dpr2 - chr2L_4_10950001 chr2L_10950001 RAL-805 209 chr2L 11050923 11050946 chr2L 11051033 11051051 7 109 2.0 1.5 1.8 2.5 128 chr2L 11050923 intron Samuel - chr2L 11050987 intron Samuel - chr2L 11051051 intron Samuel - chr2L_7_11050001 chr2L_11050001 RAL-805 210 chr2L 11312332 11312368 chr2L 11312415 11312435 13 77 2.0 3.0 2.5 3.7 103 chr2L 11312332 intergenic not near genes chr2L 11312384 intergenic not near genes chr2L 11312435 intergenic not near genes chr2L_13_11310001 chr2L_11310001 RAL-805 211 chr2L 11357978 11358005 chr2L 11358056 11358083 4 78 1.5 2.0 1.8 1.4 105 chr2L 11357978 intergenic not near genes chr2L 11358030 intergenic not near genes chr2L 11358083 intergenic not near genes chr2L_4_11355001 chr2L_11355001 RAL-805 212 chr2L 11380619 11380642 chr2L 11380696 11380716 5 76 1.0 1.5 1.2 2.3 97 chr2L 11380619 intergenic not near genes chr2L 11380668 intergenic not near genes chr2L 11380716 intergenic not near genes chr2L_5_11380001 chr2L_11380001 RAL-805 213 chr2L 11418656 11418687 chr2L 11418735 11418766 14 78 1.5 5.0 3.2 3.3 110 chr2L 11418656 intergenic not near genes chr2L 11418711 intergenic not near genes chr2L 11418766 intergenic not near genes chr2L_14_11415001 chr2L_11415001 RAL-805 214 chr2L 11478694 11478709 chr2L 11478781 11478796 4 87 3.0 2.5 2.8 1.1 102 chr2L 11478694 intergenic not near genes chr2L 11478745 intergenic not near genes chr2L 11478796 intergenic not near genes chr2L_4_11475001 chr2L_11475001 RAL-805 215 chr2L 11563639 11563667 chr2L 11568842 11568871 copia 7 5203 3.5 4.0 3.8 1.5 5232 chr2L 11563639 intergenic not near genes chr2L 11566255 intergenic not near genes chr2L 11568871 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-805 216 chr2L 11614057 11614085 chr2L 11615545 11615568 hopper2 9 1490 3.0 2.0 2.5 2.6 1511 chr2L 11614057 intron kek2 + chr2L 11614812 intron kek2 + chr2L 11615568 intron kek2 + chr2L_9_11610001 chr2L_11610001 RAL-805 217 chr2L 11684553 11684585 chr2L 11684629 11684645 4 67 2.5 3.5 3.0 1.0 92 chr2L 11684553 intergenic not near genes chr2L 11684599 intergenic not near genes chr2L 11684645 intergenic not near genes chr2L_4_11680001 chr2L_11680001 RAL-805 218 chr2L 11713510 11713540 chr2L 11720978 11721008 blood 9 7467 5.5 5.0 5.2 1.5 7498 chr2L 11713510 intergenic not near genes chr2L 11717259 intergenic not near genes chr2L 11721008 intergenic CR44143 + chr2L_9_11715001 chr2L_11715001 RAL-805 219 chr2L 11750327 11750341 chr2L 11750612 11750627 6 286 4.0 2.0 3.0 1.5 300 chr2L 11750327 intergenic not near genes chr2L 11750477 intergenic not near genes chr2L 11750627 intergenic not near genes chr2L_6_11750001 chr2L_11750001 RAL-805 220 chr2L 11820433 11820467 chr2L 11820514 11820548 8 81 2.0 4.5 3.2 1.9 115 chr2L 11820433 intron Pde1c - chr2L 11820490 intron Pde1c - chr2L 11820548 intron Pde1c - chr2L_8_11820001 chr2L_11820001 RAL-805 221 chr2L 11979579 11979613 chr2L 11979665 11979698 9 86 4.0 1.5 2.8 2.4 119 chr2L 11979579 intergenic not near genes chr2L 11979638 intergenic not near genes chr2L 11979698 intergenic not near genes chr2L_9_11975001 chr2L_11975001 RAL-805 222 chr2L 12065839 12065871 chr2L 12065916 12065948 7 77 2.0 3.5 2.8 1.8 109 chr2L 12065839 intron CG14946 - chr2L 12065894 intron CG14946 - chr2L 12065948 intron CG14946 - chr2L_7_12065001 chr2L_12065001 RAL-805 223 chr2L 12067337 12067357 chr2L 12074389 12074409 297 4 7052 2.5 4.0 3.2 1.0 7072 chr2L 12067337 intergenic not near genes chr2L 12070873 intergenic not near genes chr2L 12074409 intergenic not near genes chr2L_4_12070001 chr2L_12070001 RAL-805 224 chr2L 12096916 12096949 chr2L 12098990 12099023 13 2079 28.5 20.0 24.2 0.5 2107 chr2L 12096916 exon Mt2 + chr2L 12097970 exon Ced-12 + chr2L 12099023 exon Ced-12 + chr2L_13_12095001 chr2L_12095001 RAL-805 225 chr2L 12224891 12224896 chr2L 12224949 12224972 4 71 0.0 2.0 1.0 2.0 81 chr2L 12224891 intron aret + chr2L 12224932 intron aret + chr2L 12224972 intron aret + chr2L_4_12220001 chr2L_12220001 RAL-805 226 chr2L 12234032 12234065 chr2L 12234127 12234160 7 95 3.5 2.5 3.0 1.8 128 chr2L 12234032 intron aret + chr2L 12234096 intron aret + chr2L 12234160 intron aret + chr2L_7_12230001 chr2L_12230001 RAL-805 227 chr2L 12269845 12269861 chr2L 12270059 12270076 5 215 2.0 0.0 1.0 2.5 231 chr2L 12269845 intron aret + chr2L 12269960 intron aret + chr2L 12270076 intron aret + chr2L_5_12265001 chr2L_12265001 RAL-805 228 chr2L 12341525 12341552 chr2L 12341629 12341658 6 104 2.5 2.5 2.5 1.7 133 chr2L 12341525 intergenic not near genes chr2L 12341592 intergenic not near genes chr2L 12341658 intergenic not near genes chr2L_6_12340001 chr2L_12340001 RAL-805 229 chr2L 12349636 12349665 chr2L 12349730 12349759 10 94 2.0 1.5 1.8 3.6 123 chr2L 12349636 intron bru-2 + chr2L 12349698 intron bru-2 + chr2L 12349759 intron bru-2 + chr2L_10_12345001 chr2L_12345001 RAL-805 230 chr2L 12362171 12362210 chr2L 12362384 12362423 7 213 10.5 9.5 10.0 0.6 252 chr2L 12362171 intron bru-2 + chr2L 12362297 intron bru-2 + chr2L 12362423 intron bru-2 + chr2L_7_12360001 chr2L_12360001 RAL-805 231 chr2L 12424362 12424379 chr2L 12424435 12424455 4 74 0.0 1.5 0.8 2.2 93 chr2L 12424362 intergenic not near genes chr2L 12424408 intergenic CG6405 + chr2L 12424455 intergenic CG6405 + chr2L_4_12420001 chr2L_12420001 RAL-805 232 chr2L 12466233 12466242 chr2L 12466319 12466328 4 86 0.0 1.0 0.5 2.7 95 chr2L 12466233 intron bun - chr2L 12466280 intron bun - chr2L 12466328 intron bun - chr2L_4_12465001 chr2L_12465001 RAL-805 233 chr2L 12487885 12487915 chr2L 12487966 12487996 7 81 8.5 3.5 6.0 1.0 111 chr2L 12487885 intron bun - chr2L 12487940 intron bun - chr2L 12487996 intron bun - chr2L_7_12485001 chr2L_12485001 RAL-805 234 chr2L 12491495 12491512 chr2L 12491596 12491613 8 101 1.0 1.0 1.0 4.0 118 chr2L 12491495 intron bun - chr2L 12491554 intron bun - chr2L 12491613 intron bun - chr2L_8_12490001 chr2L_12490001 RAL-805 235 chr2L 12529248 12529443 chr2L 12529380 12529519 15 87 3.5 3.5 3.5 3.3 271 chr2L 12529248 intron bun - chr2L 12529384 intron bun - chr2L 12529519 intron bun - chr2L_15_12525001 chr2L_12525001 RAL-805 236 chr2L 12558318 12558352 chr2L 12565447 12565480 HMS-Beagle 7 7129 1.5 3.0 2.2 2.2 7162 chr2L 12558318 intergenic not near genes chr2L 12561899 intergenic not near genes chr2L 12565480 intergenic not near genes chr2L_7_12560001 chr2L_12560001 RAL-805 237 chr2L 12638783 12638797 chr2L 12638886 12638900 4 103 1.5 4.0 2.8 1.1 117 chr2L 12638783 intron Ref2 - chr2L 12638842 intron Ref2 - chr2L 12638900 intron Ref2 - chr2L_4_12635001 chr2L_12635001 RAL-805 238 chr2L 12647707 12647733 chr2L 12647788 12647813 4 81 4.0 1.5 2.8 1.1 106 chr2L 12647707 intergenic not near genes chr2L 12647760 intergenic not near genes chr2L 12647813 intergenic not near genes chr2L_4_12645001 chr2L_12645001 RAL-805 239 chr2L 12699852 12699867 chr2L 12699929 12699941 6 76 2.5 1.5 2.0 2.0 89 chr2L 12699852 exon CG17036 - chr2L 12699896 exon CG17036 - chr2L 12699941 exon CG17036 - chr2L_6_12695001 chr2L_12695001 RAL-805 240 chr2L 12728919 12728949 chr2L 12729162 12729192 pogo 12 242 3.5 4.5 4.0 2.4 273 chr2L 12728919 intron MRP + chr2L 12729056 intron MRP + chr2L 12729192 exon MRP + chr2L_12_12725001 chr2L_12725001 RAL-805 241 chr2L 12736673 12736702 chr2L 12736748 12736778 8 75 2.0 4.5 3.2 1.9 105 chr2L 12736673 intron MRP + chr2L 12736726 intron MRP + chr2L 12736778 intron MRP + chr2L_8_12735001 chr2L_12735001 RAL-805 242 chr2L 12739172 12739200 chr2L 12743953 12743977 Doc 11 4780 4.0 6.0 5.0 1.8 4805 chr2L 12739172 exon MRP + chr2L 12741574 intron MRP + chr2L 12743977 intron MRP + chr2L_11_12740001 chr2L_12740001 RAL-805 243 chr2L 12751310 12751338 chr2L 12751393 12751421 15 82 2.5 4.0 3.2 3.6 111 chr2L 12751310 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751421 intergenic not near genes chr2L_15_12750001 chr2L_12750001 RAL-805 244 chr2L 12781804 12781814 chr2L 12789247 12789257 Quasimodo 6 7443 6.5 2.0 4.2 1.2 7453 chr2L 12781804 intergenic not near genes chr2L 12785530 intergenic not near genes chr2L 12789257 intergenic not near genes chr2L_6_12785001 chr2L_12785001 RAL-805 245 chr2L 12791614 12791636 chr2L 12795276 12795290 F-element 7 3668 2.5 3.5 3.0 1.8 3676 chr2L 12791614 intergenic not near genes chr2L 12793452 intergenic not near genes chr2L 12795290 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-805 246 chr2L 12807441 12807472 chr2L 12807520 12807549 5 78 1.0 2.0 1.5 2.0 108 chr2L 12807441 intergenic CR43818 - chr2L 12807495 intergenic CR43818 - chr2L 12807549 intergenic CR43818 - chr2L_5_12805001 chr2L_12805001 RAL-805 247 chr2L 12861694 12861729 chr2L 12863161 12863173 hobo 14 1463 3.0 6.0 4.5 2.5 1479 chr2L 12861694 intergenic not near genes chr2L 12862434 intergenic not near genes chr2L 12863173 intergenic not near genes chr2L_14_12860001 chr2L_12860001 RAL-805 248 chr2L 12933853 12933882 chr2L 12941320 12941349 blood 12 7467 4.0 2.5 3.2 2.9 7496 chr2L 12933853 intergenic not near genes chr2L 12937601 intergenic not near genes chr2L 12941349 intergenic not near genes chr2L_12_12935001 chr2L_12935001 RAL-805 249 chr2L 12945981 12946003 chr2L 12946061 12946083 5 80 1.5 3.5 2.5 1.4 102 chr2L 12945981 intergenic not near genes chr2L 12946032 intergenic not near genes chr2L 12946083 intergenic not near genes chr2L_5_12945001 chr2L_12945001 RAL-805 250 chr2L 12963795 12963824 chr2L 12963897 12963926 11 98 4.5 2.0 3.2 2.6 131 chr2L 12963795 intergenic not near genes chr2L 12963860 intergenic not near genes chr2L 12963926 intergenic not near genes chr2L_11_12960001 chr2L_12960001 RAL-805 251 chr2L 13109450 13109476 chr2L 13109578 13109604 7 128 1.0 4.5 2.8 1.8 154 chr2L 13109450 3` UTR CG5142 + chr2L 13109527 intergenic CG5142 + chr2L 13109604 intergenic CG5142 + chr2L_7_13105001 chr2L_13105001 RAL-805 252 chr2L 13152228 13152260 chr2L 13152306 13152336 20 77 7.0 2.0 4.5 3.6 108 chr2L 13152228 intergenic not near genes chr2L 13152282 intergenic not near genes chr2L 13152336 intergenic not near genes chr2L_20_13150001 chr2L_13150001 RAL-805 253 chr2L 13241958 13241974 chr2L 13244342 13244357 BS 13 2383 3.0 3.0 3.0 3.2 2399 chr2L 13241958 5` UTR CR45330 + chr2L 13243158 intron CR45330 + chr2L 13244357 5` UTR CR45330 + chr2L_13_13240001 chr2L_13240001 RAL-805 254 chr2L 13405647 13405679 chr2L 13410444 13410476 Doc 14 4796 4.0 4.0 4.0 2.8 4829 chr2L 13405647 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410476 intron CG7110 + chr2L_14_13405001 chr2L_13405001 RAL-805 255 chr2L 13435440 13435473 chr2L 13435546 13435554 7 98 3.0 4.0 3.5 1.6 114 chr2L 13435440 intron CG42784 + chr2L 13435497 intron CG42784 + chr2L 13435554 intron CG42784 + chr2L_7_13435001 chr2L_13435001 RAL-805 256 chr2L 13440233 13440258 chr2L 13440326 13440351 10 93 1.5 5.0 3.2 2.4 118 chr2L 13440233 intron,3` UTR CG42784 +,CR45683 - chr2L 13440292 intron,3` UTR CG42784 +,CR45683 - chr2L 13440351 intron,3` UTR CG42784 +,CR45683 - chr2L_10_13440001 chr2L_13440001 RAL-805 257 chr2L 13449462 13449493 chr2L 13456898 13456929 Quasimodo 5 7436 3.0 2.0 2.5 1.4 7467 chr2L 13449462 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453196 intron CG42784 + chr2L 13456929 intron CG42784 + chr2L_5_13450001 chr2L_13450001 RAL-805 258 chr2L 13622135 13622169 chr2L 13622234 13622268 10 93 3.5 1.5 2.5 2.9 133 chr2L 13622135 intron kuz + chr2L 13622202 intron kuz + chr2L 13622268 intron kuz + chr2L_10_13620001 chr2L_13620001 RAL-805 259 chr2L 13693013 13693035 chr2L 13693089 13693111 6 75 3.0 5.0 4.0 1.2 98 chr2L 13693013 intron CG31814 - chr2L 13693062 intron CG31814 - chr2L 13693111 intron CG31814 - chr2L_6_13690001 chr2L_13690001 RAL-805 260 chr2L 13699554 13699587 chr2L 13699631 13699664 12 73 1.0 1.5 1.2 5.5 110 chr2L 13699554 intron CG31814 - chr2L 13699609 intron CG31814 - chr2L 13699664 intron CG31814 - chr2L_12_13695001 chr2L_13695001 RAL-805 261 chr2L 13701888 13701913 chr2L 13701968 13701993 5 80 2.5 4.5 3.5 1.1 105 chr2L 13701888 intron CG31814 - chr2L 13701940 intron CG31814 - chr2L 13701993 intron CG31814 - chr2L_5_13700001 chr2L_13700001 RAL-805 262 chr2L 13733775 13733784 chr2L 13733894 13733903 4 119 3.0 2.0 2.5 1.1 128 chr2L 13733775 intergenic not near genes chr2L 13733839 intergenic not near genes chr2L 13733903 intergenic not near genes chr2L_4_13730001 chr2L_13730001 RAL-805 263 chr2L 13853085 13853117 chr2L 13862235 13862267 roo 10 9150 3.0 2.0 2.5 2.9 9182 chr2L 13853085 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862267 intron CenG1A + chr2L_10_13855001 chr2L_13855001 RAL-805 264 chr2L 13918813 13918847 chr2L 13918900 13918934 8 87 1.0 1.5 1.2 3.6 121 chr2L 13918813 intron Ance-3 + chr2L 13918874 intron Ance-3 + chr2L 13918934 intron Ance-3 + chr2L_8_13915001 chr2L_13915001 RAL-805 265 chr2L 13959746 13959767 chr2L 13959830 13959848 4 84 8.0 5.0 6.5 0.5 102 chr2L 13959746 intron NimA + chr2L 13959797 intron NimA + chr2L 13959848 intron NimA + chr2L_4_13955001 chr2L_13955001 RAL-805 266 chr2L 13988287 13988294 chr2L 13988374 13988381 4 87 4.0 3.0 3.5 0.9 94 chr2L 13988287 intron rk - chr2L 13988334 intron rk - chr2L 13988381 intron rk - chr2L_4_13985001 chr2L_13985001 RAL-805 267 chr2L 14068601 14068616 chr2L 14068688 14068695 4 80 2.5 0.0 1.2 1.8 94 chr2L 14068601 intron nAChRalpha5 + chr2L 14068648 intron nAChRalpha5 + chr2L 14068695 intron nAChRalpha5 + chr2L_4_14065001 chr2L_14065001 RAL-805 268 chr2L 14109516 14109544 chr2L 14109607 14109635 7 91 1.0 2.5 1.8 2.5 119 chr2L 14109516 intergenic CG15293 -,CG31769 - chr2L 14109576 intergenic CG31769 -,CG15293 - chr2L 14109635 3` UTR CG31769 - chr2L_7_14105001 chr2L_14105001 RAL-805 269 chr2L 14118668 14118691 chr2L 14118764 14118790 6 98 2.0 5.0 3.5 1.3 122 chr2L 14118668 intergenic not near genes chr2L 14118729 intergenic not near genes chr2L 14118790 intergenic not near genes chr2L_6_14115001 chr2L_14115001 RAL-805 270 chr2L 14246286 14246311 chr2L 14246364 14246389 6 78 0.0 0.0 0.0 6.0 103 chr2L 14246286 intergenic not near genes chr2L 14246338 intergenic not near genes chr2L 14246389 intergenic not near genes chr2L_6_14245001 chr2L_14245001 RAL-805 271 chr2L 14271040 14271074 chr2L 14271117 14271151 14 76 4.0 1.5 2.8 3.7 111 chr2L 14271040 intron wb + chr2L 14271096 intron wb + chr2L 14271151 intron wb + chr2L_14_14270001 chr2L_14270001 RAL-805 272 chr2L 14374778 14374797 chr2L 14374869 14374887 7 91 0.5 0.5 0.5 4.7 109 chr2L 14374778 intergenic not near genes chr2L 14374832 intergenic not near genes chr2L 14374887 intergenic not near genes chr2L_7_14370001 chr2L_14370001 RAL-805 273 chr2L 14410039 14410060 chr2L 14410134 14410155 5 95 1.5 1.0 1.2 2.3 116 chr2L 14410039 5` UTR CR44733 + chr2L 14410097 intergenic CR44733 + chr2L 14410155 intergenic CR44733 + chr2L_5_14410001 chr2L_14410001 RAL-805 274 chr2L 14502351 14502381 chr2L 14502440 14502470 14 86 0.5 3.0 1.8 5.0 119 chr2L 14502351 intergenic not near genes chr2L 14502410 intergenic not near genes chr2L 14502470 intergenic not near genes chr2L_14_14500001 chr2L_14500001 RAL-805 275 chr2L 14564196 14564230 chr2L 14564272 14564277 9 65 1.0 2.0 1.5 3.6 81 chr2L 14564196 intergenic CG3473 - chr2L 14564236 intergenic not near genes chr2L 14564277 intergenic not near genes chr2L_9_14560001 chr2L_14560001 RAL-805 276 chr2L 14621379 14621403 chr2L 14621479 14621503 7 99 3.5 2.0 2.8 1.8 124 chr2L 14621379 intron osp - chr2L 14621441 intron osp - chr2L 14621503 intron osp - chr2L_7_14620001 chr2L_14620001 RAL-805 277 chr2L 14803882 14803902 chr2L 14809085 14809105 copia 9 5203 3.0 3.5 3.2 2.1 5223 chr2L 14803882 intergenic not near genes chr2L 14806494 intergenic not near genes chr2L 14809105 intergenic not near genes chr2L_9_14805001 chr2L_14805001 RAL-805 278 chr2L 14839750 14839773 chr2L 14839826 14839848 5 76 3.5 3.0 3.2 1.2 98 chr2L 14839750 intergenic not near genes chr2L 14839799 intergenic not near genes chr2L 14839848 intergenic not near genes chr2L_5_14835001 chr2L_14835001 RAL-805 279 chr2L 14840978 14841009 chr2L 14841065 14841095 10 87 3.0 0.5 1.8 3.6 117 chr2L 14840978 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841095 3` UTR CR43805 - chr2L_10_14840001 chr2L_14840001 RAL-805 280 chr2L 14887691 14887701 chr2L 14887769 14887779 4 78 3.0 1.0 2.0 1.3 88 chr2L 14887691 intergenic not near genes chr2L 14887735 intergenic not near genes chr2L 14887779 intergenic not near genes chr2L_4_14885001 chr2L_14885001 RAL-805 281 chr2L 14889959 14889988 chr2L 14890383 14890413 jockey 8 425 2.0 1.5 1.8 2.9 454 chr2L 14889959 intergenic not near genes chr2L 14890186 intergenic not near genes chr2L 14890413 intergenic not near genes chr2L_8_14890001 chr2L_14890001 RAL-805 282 chr2L 14984381 14984399 chr2L 14991983 14992001 opus 4 7602 4.0 1.5 2.8 1.1 7620 chr2L 14984381 intron mol - chr2L 14988191 intron mol - chr2L 14992001 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-805 283 chr2L 15013170 15013177 chr2L 15013277 15013286 4 107 0.0 3.0 1.5 1.6 116 chr2L 15013170 intergenic not near genes chr2L 15013228 intergenic not near genes chr2L 15013286 intergenic not near genes chr2L_4_15010001 chr2L_15010001 RAL-805 284 chr2L 15044711 15044740 chr2L 15044787 15044816 6 76 1.0 0.0 0.5 4.0 105 chr2L 15044711 intergenic ck - chr2L 15044764 intergenic ck - chr2L 15044816 intergenic ck - chr2L_6_15040001 chr2L_15040001 RAL-805 285 chr2L 15077905 15078102 chr2L 15077993 15078190 10 88 1.0 2.5 1.8 3.6 285 chr2L 15077905 intron CG15270 + chr2L 15078048 intron CG15270 + chr2L 15078190 intron CG15270 + chr2L_10_15075001 chr2L_15075001 RAL-805 286 chr2L 15082669 15082691 chr2L 15082763 15082785 6 94 3.0 1.5 2.2 1.9 116 chr2L 15082669 intron CG15270 + chr2L 15082727 intron CG15270 + chr2L 15082785 intron CG15270 + chr2L_6_15080001 chr2L_15080001 RAL-805 287 chr2L 15111942 15111956 chr2L 15112050 15112065 5 109 2.0 2.5 2.2 1.6 123 chr2L 15111942 intron CG15269 + chr2L 15112004 intron CG15269 + chr2L 15112065 intron CG15269 + chr2L_5_15110001 chr2L_15110001 RAL-805 288 chr2L 15163983 15164007 chr2L 15164060 15164083 5 77 1.0 1.0 1.0 2.5 100 chr2L 15163983 intron CG4168 - chr2L 15164033 intron CG4168 - chr2L 15164083 intron CG4168 - chr2L_5_15160001 chr2L_15160001 RAL-805 289 chr2L 15314305 15314326 chr2L 15314389 15314410 4 84 2.0 5.0 3.5 0.9 105 chr2L 15314305 intergenic not near genes chr2L 15314358 intergenic not near genes chr2L 15314410 intergenic not near genes chr2L_4_15310001 chr2L_15310001 RAL-805 290 chr2L 15375835 15375843 chr2L 15375935 15375955 4 109 2.0 1.0 1.5 1.6 120 chr2L 15375835 intergenic not near genes chr2L 15375895 intergenic not near genes chr2L 15375955 intergenic not near genes chr2L_4_15375001 chr2L_15375001 RAL-805 291 chr2L 15401638 15401671 chr2L 15402333 15402364 11 694 1.5 1.5 1.5 4.4 726 chr2L 15401638 intergenic not near genes chr2L 15402001 intergenic not near genes chr2L 15402364 intergenic not near genes chr2L_11_15400001 chr2L_15400001 RAL-805 292 chr2L 15446056 15446074 chr2L 15453524 15453543 blood 6 7468 3.5 2.0 2.8 1.6 7487 chr2L 15446056 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453543 intergenic not near genes chr2L_6_15445001 chr2L_15445001 RAL-805 293 chr2L 15510937 15510959 chr2L 15511030 15511052 5 93 3.0 3.5 3.2 1.2 115 chr2L 15510937 intergenic not near genes chr2L 15510994 intergenic not near genes chr2L 15511052 intergenic not near genes chr2L_5_15510001 chr2L_15510001 RAL-805 294 chr2L 15514318 15514328 chr2L 15514402 15514412 6 84 3.5 7.5 5.5 0.9 94 chr2L 15514318 intergenic not near genes chr2L 15514365 intergenic not near genes chr2L 15514412 intergenic not near genes chr2L_6_15510001 chr2L_15510001 RAL-805 295 chr2L 15576935 15576944 chr2L 15577032 15577048 4 102 4.0 5.5 4.8 0.7 113 chr2L 15576935 intron kek3 + chr2L 15576992 intron kek3 + chr2L 15577048 intron kek3 + chr2L_4_15575001 chr2L_15575001 RAL-805 296 chr2L 15586412 15586427 chr2L 15593464 15593479 297 9 7052 2.5 1.0 1.8 3.2 7067 chr2L 15586412 intergenic not near genes chr2L 15589946 intergenic not near genes chr2L 15593479 intergenic not near genes chr2L_9_15585001 chr2L_15585001 RAL-805 297 chr2L 15733659 15733685 chr2L 15733735 15733761 14 76 4.5 0.0 2.2 4.4 102 chr2L 15733659 intron CycE - chr2L 15733710 intron CycE - chr2L 15733761 intron CycE - chr2L_14_15730001 chr2L_15730001 RAL-805 298 chr2L 15823352 15823372 chr2L 15823428 15823448 4 76 2.5 2.5 2.5 1.1 96 chr2L 15823352 intergenic CR44601 - chr2L 15823400 intergenic CR44601 - chr2L 15823448 intergenic not near genes chr2L_4_15820001 chr2L_15820001 RAL-805 299 chr2L 15915652 15915685 chr2L 15915730 15915762 9 77 2.5 4.5 3.5 2.0 110 chr2L 15915652 intron beat-Ib - chr2L 15915707 intron beat-Ib - chr2L 15915762 intron beat-Ib - chr2L_9_15915001 chr2L_15915001 RAL-805 300 chr2L 15933571 15933603 chr2L 15936108 15936141 11 2538 13.0 11.5 12.2 0.8 2570 chr2L 15933571 intron beat-Ib - chr2L 15934856 intron beat-Ib - chr2L 15936141 intron beat-Ib - chr2L_11_15930001 chr2L_15930001 RAL-805 301 chr2L 15933223 15933244 chr2L 15936129 15936149 7 2905 13.5 12.0 12.8 0.5 2926 chr2L 15933223 intron beat-Ib - chr2L 15934686 intron beat-Ib - chr2L 15936149 intron beat-Ib - chr2L_7_15930001 chr2L_15930001 RAL-805 302 chr2L 15947742 15947767 chr2L 15948366 15948391 8 622 1.5 1.5 1.5 3.2 649 chr2L 15947742 intron beat-Ib - chr2L 15948066 intron beat-Ib - chr2L 15948391 intron beat-Ib - chr2L_8_15945001 chr2L_15945001 RAL-805 303 chr2L 15950387 15950412 chr2L 15950465 15950490 5 77 2.5 2.0 2.2 1.6 103 chr2L 15950387 intron beat-Ib - chr2L 15950438 intron beat-Ib - chr2L 15950490 intron beat-Ib - chr2L_5_15950001 chr2L_15950001 RAL-805 304 chr2L 15956022 15956054 chr2L 15957489 15957521 hobo 13 1467 5.0 2.5 3.8 2.7 1499 chr2L 15956022 intron beat-Ib - chr2L 15956772 intron beat-Ib - chr2L 15957521 intron beat-Ib - chr2L_13_15955001 chr2L_15955001 RAL-805 305 chr2L 15999706 15999735 chr2L 16000051 16000062 7 338 2.0 3.5 2.8 1.8 356 chr2L 15999706 intergenic not near genes chr2L 15999884 intergenic beat-Ic + chr2L 16000062 intergenic beat-Ic + chr2L_7_15995001 chr2L_15995001 RAL-805 306 chr2L 16058125 16058143 chr2L 16058266 16058284 6 141 1.5 2.0 1.8 2.1 159 chr2L 16058125 intron beat-Ia + chr2L 16058204 intron beat-Ia + chr2L 16058284 intron beat-Ia + chr2L_6_16055001 chr2L_16055001 RAL-805 307 chr2L 16059962 16059982 chr2L 16060060 16060079 6 97 0.5 2.0 1.2 2.7 117 chr2L 16059962 intron beat-Ia + chr2L 16060020 intron beat-Ia + chr2L 16060079 intron beat-Ia + chr2L_6_16060001 chr2L_16060001 RAL-805 308 chr2L 16071771 16071771 chr2L 16217659 16217660 copia 6 145889 13.0 15.5 14.2 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-805 309 chr2L 16141167 16141187 chr2L 16146374 16146394 copia 8 5207 2.5 2.0 2.2 2.5 5227 chr2L 16141167 intergenic not near genes chr2L 16143780 intergenic not near genes chr2L 16146394 intergenic not near genes chr2L_8_16140001 chr2L_16140001 RAL-805 310 chr2L 16153752 16153761 chr2L 16160819 16160829 297 6 7068 3.5 3.0 3.2 1.4 7077 chr2L 16153752 intergenic not near genes chr2L 16157290 intergenic not near genes chr2L 16160829 intergenic not near genes chr2L_6_16155001 chr2L_16155001 RAL-805 311 chr2L 16207490 16207511 chr2L 16207714 16207735 5 224 1.0 1.5 1.2 2.3 245 chr2L 16207490 intergenic not near genes chr2L 16207612 intergenic not near genes chr2L 16207735 intergenic not near genes chr2L_5_16205001 chr2L_16205001 RAL-805 312 chr2L 9084336 9084340 chr2L 16217660 16217660 8 7133322 16.5 16.0 16.2 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-805 313 chr2L 16243232 16243367 chr2L 16243308 16243447 5 79 3.0 4.0 3.5 1.1 215 chr2L 16243232 exon CG42818 + chr2L 16243340 exon CG42818 + chr2L 16243447 exon CG42818 + chr2L_5_16240001 chr2L_16240001 RAL-805 314 chr2L 16254891 16254918 chr2L 16255150 16255177 7 258 6.0 2.0 4.0 1.4 286 chr2L 16254891 intron PRL-1 - chr2L 16255034 intron PRL-1 - chr2L 16255177 intron PRL-1 - chr2L_7_16255001 chr2L_16255001 RAL-805 315 chr2L 16280255 16280279 chr2L 16281425 16281448 1360 5 1170 4.0 3.5 3.8 1.0 1193 chr2L 16280255 intron crp - chr2L 16280852 intron crp - chr2L 16281448 intron crp - chr2L_5_16280001 chr2L_16280001 RAL-805 316 chr2L 16448972 16448990 chr2L 16449053 16449074 8 83 3.5 5.5 4.5 1.5 102 chr2L 16448972 5` UTR Idgf2 + chr2L 16449023 5` UTR Idgf2 + chr2L 16449074 5` UTR Idgf2 + chr2L_8_16445001 chr2L_16445001 RAL-805 317 chr2L 16504990 16505016 chr2L 16505100 16505122 9 109 0.0 1.5 0.8 5.0 132 chr2L 16504990 intron Tpr2 + chr2L 16505056 intron Tpr2 + chr2L 16505122 intron Tpr2 + chr2L_9_16505001 chr2L_16505001 RAL-805 318 chr2L 16562251 16562256 chr2L 16562367 16562371 4 116 5.0 3.5 4.2 0.8 120 chr2L 16562251 intron CG42389 + chr2L 16562311 intron CG42389 + chr2L 16562371 intron CG42389 + chr2L_4_16560001 chr2L_16560001 RAL-805 319 chr2L 16583095 16583124 chr2L 16583183 16583211 8 88 0.5 1.0 0.8 4.4 116 chr2L 16583095 intron CG42389 + chr2L 16583153 intron CG42389 + chr2L 16583211 intron CG42389 + chr2L_8_16580001 chr2L_16580001 RAL-805 320 chr2L 16583552 16583583 chr2L 16583686 16583717 9 133 1.0 2.0 1.5 3.6 165 chr2L 16583552 intron CG42389 + chr2L 16583634 intron CG42389 + chr2L 16583717 intron CG42389 + chr2L_9_16580001 chr2L_16580001 RAL-805 321 chr2L 16654704 16654732 chr2L 16654797 16654825 13 93 3.0 3.0 3.0 3.2 121 chr2L 16654704 intron CG42389 + chr2L 16654764 intron CG42389 + chr2L 16654825 intron CG42389 + chr2L_13_16650001 chr2L_16650001 RAL-805 322 chr2L 16952687 16952717 chr2L 16952795 16952823 9 109 1.5 2.0 1.8 3.2 136 chr2L 16952687 intergenic not near genes chr2L 16952755 intergenic not near genes chr2L 16952823 intergenic not near genes chr2L_9_16950001 chr2L_16950001 RAL-805 323 chr2L 16958101 16958135 chr2L 16962889 16962923 Doc 12 4787 2.5 2.5 2.5 3.4 4822 chr2L 16958101 intergenic not near genes chr2L 16960512 intergenic not near genes chr2L 16962923 intergenic not near genes chr2L_12_16960001 chr2L_16960001 RAL-805 324 chr2L 17033914 17033944 chr2L 17034000 17034029 11 86 1.5 2.5 2.0 3.7 115 chr2L 17033914 intergenic not near genes chr2L 17033972 intergenic not near genes chr2L 17034029 intergenic not near genes chr2L_11_17030001 chr2L_17030001 RAL-805 325 chr2L 17070205 17070217 chr2L 17070300 17070313 4 96 1.0 1.0 1.0 2.0 108 chr2L 17070205 intergenic not near genes chr2L 17070259 intergenic not near genes chr2L 17070313 intergenic not near genes chr2L_4_17070001 chr2L_17070001 RAL-805 326 chr2L 17087386 17087403 chr2L 17087504 17087521 4 116 1.5 1.0 1.2 1.8 135 chr2L 17087386 intergenic CG12620 + chr2L 17087454 intergenic CG12620 + chr2L 17087521 intergenic CG12620 + chr2L_4_17085001 chr2L_17085001 RAL-805 327 chr2L 17089525 17089539 chr2L 17089710 17089724 7 184 0.0 3.5 1.8 2.5 199 chr2L 17089525 intergenic CG12620 + chr2L 17089624 intergenic CG12620 + chr2L 17089724 intergenic not near genes chr2L_7_17085001 chr2L_17085001 RAL-805 328 chr2L 17101032 17101052 chr2L 17101561 17101581 4 529 17.0 15.0 16.0 0.2 549 chr2L 17101032 intergenic not near genes chr2L 17101306 intergenic not near genes chr2L 17101581 intergenic not near genes chr2L_4_17100001 chr2L_17100001 RAL-805 329 chr2L 17158730 17158757 chr2L 17158831 17158858 10 102 1.5 2.0 1.8 3.6 128 chr2L 17158730 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158794 intron,intron CG34106 +,beat-IIIa + chr2L 17158858 intron,intron CG34106 +,beat-IIIa + chr2L_10_17155001 chr2L_17155001 RAL-805 330 chr2L 17159857 17159877 chr2L 17159940 17159960 9 82 3.0 1.0 2.0 3.0 103 chr2L 17159857 intron,intron CG34106 +,beat-IIIa + chr2L 17159908 intron,intron CG34106 +,beat-IIIa + chr2L 17159960 intron,intron CG34106 +,beat-IIIa + chr2L_9_17155001 chr2L_17155001 RAL-805 331 chr2L 17163607 17163638 chr2L 17163695 17163727 15 88 3.0 1.5 2.2 4.7 120 chr2L 17163607 intron,intron CG34106 +,beat-IIIa + chr2L 17163667 intron,intron CG34106 +,beat-IIIa + chr2L 17163727 intron,intron CG34106 +,beat-IIIa + chr2L_15_17160001 chr2L_17160001 RAL-805 332 chr2L 17199164 17199178 chr2L 17200631 17200645 hobo 4 1466 4.5 2.0 3.2 1.0 1481 chr2L 17199164 intron beat-IIIc - chr2L 17199904 intron beat-IIIc - chr2L 17200645 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 RAL-805 333 chr2L 17273195 17273220 chr2L 17277978 17278003 F-element 7 4782 4.0 3.0 3.5 1.6 4808 chr2L 17273195 intergenic not near genes chr2L 17275599 intergenic not near genes chr2L 17278003 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-805 334 chr2L 17327913 17327929 chr2L 17327999 17328015 5 86 8.5 6.5 7.5 0.6 102 chr2L 17327913 intergenic not near genes chr2L 17327964 intergenic not near genes chr2L 17328015 intergenic not near genes chr2L_5_17325001 chr2L_17325001 RAL-805 335 chr2L 17386008 17386044 chr2L 17386089 17386124 12 80 1.0 2.5 1.8 4.3 116 chr2L 17386008 intron CLIP-190 + chr2L 17386066 intron CLIP-190 + chr2L 17386124 intron CLIP-190 + chr2L_12_17385001 chr2L_17385001 RAL-805 336 chr2L 17425770 17425789 chr2L 17425897 17425916 7 127 1.0 2.0 1.5 2.8 146 chr2L 17425770 intron Dif - chr2L 17425843 intron Dif - chr2L 17425916 intron Dif - chr2L_7_17425001 chr2L_17425001 RAL-805 337 chr2L 17432013 17432047 chr2L 17432120 17432154 1360 6 105 0.0 1.0 0.5 4.0 141 chr2L 17432013 intron Dif - chr2L 17432084 intron Dif - chr2L 17432154 intron Dif - chr2L_6_17430001 chr2L_17430001 RAL-805 338 chr2L 17491083 17491088 chr2L 17491165 17491170 5 82 0.0 5.5 2.8 1.3 87 chr2L 17491083 intron qua - chr2L 17491126 intron qua - chr2L 17491170 intron qua - chr2L_5_17490001 chr2L_17490001 RAL-805 339 chr2L 17543597 17543620 chr2L 17543689 17543713 5 92 3.5 4.0 3.8 1.0 116 chr2L 17543597 intergenic not near genes chr2L 17543655 intergenic not near genes chr2L 17543713 intergenic not near genes chr2L_5_17540001 chr2L_17540001 RAL-805 340 chr2L 17623670 17623695 chr2L 17623900 17623924 4 230 2.5 1.0 1.8 1.4 254 chr2L 17623670 intergenic not near genes chr2L 17623797 intergenic not near genes chr2L 17623924 intergenic not near genes chr2L_4_17620001 chr2L_17620001 RAL-805 341 chr2L 17652251 17652261 chr2L 17652323 17652340 4 77 0.5 1.5 1.0 2.0 89 chr2L 17652251 intron CadN - chr2L 17652296 intron CadN - chr2L 17652340 intron CadN - chr2L_4_17650001 chr2L_17650001 RAL-805 342 chr2L 17677299 17677329 chr2L 17677500 17677529 7 200 1.5 2.0 1.8 2.5 230 chr2L 17677299 intron CadN - chr2L 17677414 intron CadN - chr2L 17677529 intron CadN - chr2L_7_17675001 chr2L_17675001 RAL-805 343 chr2L 17727541 17727576 chr2L 17727627 17727662 8 86 0.5 1.0 0.8 4.4 121 chr2L 17727541 intron CadN - chr2L 17727602 intron CadN - chr2L 17727662 intron CadN - chr2L_8_17725001 chr2L_17725001 RAL-805 344 chr2L 17750209 17750230 chr2L 17756915 17756936 5 6706 16.0 19.5 17.8 0.3 6727 chr2L 17750209 intron CadN - chr2L 17753572 intron CadN - chr2L 17756936 intron CadN - chr2L_5_17750001 chr2L_17750001 RAL-805 345 chr2L 17796027 17796042 chr2L 17796108 17796123 7 81 1.0 2.0 1.5 2.8 96 chr2L 17796027 intron CadN2 - chr2L 17796075 intron CadN2 - chr2L 17796123 intron CadN2 - chr2L_7_17795001 chr2L_17795001 RAL-805 346 chr2L 17819923 17819951 chr2L 17825126 17825154 copia 10 5203 1.0 1.0 1.0 5.0 5231 chr2L 17819923 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825154 intron CadN2 - chr2L_10_17820001 chr2L_17820001 RAL-805 347 chr2L 17867884 17867919 chr2L 17868026 17868060 9 142 1.0 4.0 2.5 2.6 176 chr2L 17867884 intron CadN2 - chr2L 17867972 intron CadN2 - chr2L 17868060 intron CadN2 - chr2L_9_17865001 chr2L_17865001 RAL-805 348 chr2L 17911964 17911983 chr2L 17914141 17914161 pogo 4 2178 5.0 2.5 3.8 0.8 2197 chr2L 17911964 intergenic not near genes chr2L 17913062 intergenic not near genes chr2L 17914161 intergenic CG43271 - chr2L_4_17910001 chr2L_17910001 RAL-805 349 chr2L 17944417 17944441 chr2L 17944579 17944604 6 162 6.5 4.0 5.2 1.0 187 chr2L 17944417 intergenic not near genes chr2L 17944510 intergenic not near genes chr2L 17944604 intergenic not near genes chr2L_6_17940001 chr2L_17940001 RAL-805 350 chr2L 17951960 17951978 chr2L 17953413 17953444 hobo 6 1464 2.5 4.0 3.2 1.4 1484 chr2L 17951960 intergenic CR44398 -,CR44397 - chr2L 17952702 intergenic not near genes chr2L 17953444 intergenic not near genes chr2L_6_17950001 chr2L_17950001 RAL-805 351 chr2L 18051879 18051899 chr2L 18061026 18061046 roo 5 9146 5.0 3.0 4.0 1.0 9167 chr2L 18051879 intron rdo + chr2L 18056462 intron rdo + chr2L 18061046 intron rdo + chr2L_5_18055001 chr2L_18055001 RAL-805 352 chr2L 18111243 18111265 chr2L 18111334 18111355 13 91 1.5 2.5 2.0 4.3 112 chr2L 18111243 intergenic not near genes chr2L 18111299 intergenic not near genes chr2L 18111355 intergenic not near genes chr2L_13_18110001 chr2L_18110001 RAL-805 353 chr2L 18264063 18264095 chr2L 18264140 18264172 7 77 1.0 2.0 1.5 2.8 109 chr2L 18264063 intron CG42750 - chr2L 18264118 intron CG42750 - chr2L 18264172 intron CG42750 - chr2L_7_18260001 chr2L_18260001 RAL-805 354 chr2L 18408035 18408050 chr2L 18412819 18412834 Doc 7 4784 5.0 4.0 4.5 1.3 4799 chr2L 18408035 intergenic not near genes chr2L 18410434 intergenic not near genes chr2L 18412834 intergenic not near genes chr2L_7_18410001 chr2L_18410001 RAL-805 355 chr2L 18546227 18546255 chr2L 18546313 18546341 12 85 4.5 1.0 2.8 3.2 114 chr2L 18546227 intron Pde11 - chr2L 18546284 intron Pde11 - chr2L 18546341 intron Pde11 - chr2L_12_18545001 chr2L_18545001 RAL-805 356 chr2L 18630802 18630821 chr2L 18630883 18630900 10 80 2.0 1.5 1.8 3.6 98 chr2L 18630802 intron MESR3 + chr2L 18630851 intron MESR3 + chr2L 18630900 intron MESR3 + chr2L_10_18630001 chr2L_18630001 RAL-805 357 chr2L 18745140 18745168 chr2L 18745227 18745251 7 86 2.5 2.5 2.5 2.0 111 chr2L 18745140 intergenic not near genes chr2L 18745196 intergenic not near genes chr2L 18745251 intergenic not near genes chr2L_7_18745001 chr2L_18745001 RAL-805 358 chr2L 18791070 18791090 chr2L 18791149 18791169 5 79 4.0 2.5 3.2 1.2 99 chr2L 18791070 intron ham - chr2L 18791120 intron ham - chr2L 18791169 intron ham - chr2L_5_18790001 chr2L_18790001 RAL-805 359 chr2L 18811409 18811434 chr2L 18811491 18811516 4 82 2.0 0.0 1.0 2.0 107 chr2L 18811409 intergenic CG10570 -,CG42502 - chr2L 18811462 intergenic CG10570 -,CG42502 - chr2L 18811516 intergenic not near genes chr2L_4_18810001 chr2L_18810001 RAL-805 360 chr2L 18812556 18812580 chr2L 18812819 18812843 9 263 3.0 1.5 2.2 2.8 287 chr2L 18812556 intergenic CG17325 +,CG42305 + chr2L 18812700 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812843 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_9_18810001 chr2L_18810001 RAL-805 361 chr2L 18816848 18816863 chr2L 18817053 18817068 5 205 27.0 23.0 25.0 0.2 220 chr2L 18816848 intergenic not near genes chr2L 18816958 intergenic not near genes chr2L 18817068 intergenic not near genes chr2L_5_18815001 chr2L_18815001 RAL-805 362 chr2L 18888196 18888213 chr2L 18888558 18888575 5 362 1.0 4.5 2.8 1.3 379 chr2L 18888196 intergenic not near genes chr2L 18888386 intergenic not near genes chr2L 18888575 intergenic not near genes chr2L_5_18885001 chr2L_18885001 RAL-805 363 chr2L 18898395 18898426 chr2L 18898477 18898507 9 82 3.0 1.5 2.2 2.8 112 chr2L 18898395 intergenic not near genes chr2L 18898451 intergenic not near genes chr2L 18898507 intergenic not near genes chr2L_9_18895001 chr2L_18895001 RAL-805 364 chr2L 18926586 18926593 chr2L 18926693 18926700 5 107 2.0 3.0 2.5 1.4 114 chr2L 18926586 intron ssp3 - chr2L 18926643 intron ssp3 - chr2L 18926700 intron ssp3 - chr2L_5_18925001 chr2L_18925001 RAL-805 365 chr2L 19121039 19121072 chr2L 19121117 19121150 9 78 1.5 2.5 2.0 3.0 111 chr2L 19121039 intergenic l(2)37Cc - chr2L 19121094 intergenic l(2)37Cc - chr2L 19121150 intergenic l(2)37Cc - chr2L_9_19120001 chr2L_19120001 RAL-805 366 chr2L 19147268 19147288 chr2L 19147383 19147388 4 111 9.0 0.0 4.5 0.7 120 chr2L 19147268 intron brat + chr2L 19147328 intron brat + chr2L 19147388 intron brat + chr2L_4_19145001 chr2L_19145001 RAL-805 367 chr2L 19199676 19199695 chr2L 19199753 19199764 7 74 2.5 2.0 2.2 2.2 88 chr2L 19199676 intron drl + chr2L 19199720 intron drl + chr2L 19199764 intron drl + chr2L_7_19195001 chr2L_19195001 RAL-805 368 chr2L 19199698 19199707 chr2L 19199745 19199784 4 66 1.5 1.5 1.5 1.6 86 chr2L 19199698 intron drl + chr2L 19199741 intron drl + chr2L 19199784 intron drl + chr2L_4_19195001 chr2L_19195001 RAL-805 369 chr2L 19209615 19209628 chr2L 19209700 19209713 4 85 3.0 1.0 2.0 1.3 98 chr2L 19209615 intergenic not near genes chr2L 19209664 intergenic not near genes chr2L 19209713 intergenic not near genes chr2L_4_19205001 chr2L_19205001 RAL-805 370 chr2L 19316205 19316218 chr2L 19316275 19316292 7 74 3.5 0.5 2.0 2.3 87 chr2L 19316205 intergenic not near genes chr2L 19316248 intergenic not near genes chr2L 19316292 intergenic not near genes chr2L_7_19315001 chr2L_19315001 RAL-805 371 chr2L 19345022 19345038 chr2L 19357228 19357246 blood 4 12207 5.0 4.5 4.8 0.7 12224 chr2L 19345022 intron dnt - chr2L 19351134 intron dnt - chr2L 19357246 intron dnt - chr2L_4_19350001 chr2L_19350001 RAL-805 372 chr2L 19357545 19357568 chr2L 19357635 19357658 6 90 3.0 7.0 5.0 1.0 113 chr2L 19357545 intron dnt - chr2L 19357602 intron dnt - chr2L 19357658 intron dnt - chr2L_6_19355001 chr2L_19355001 RAL-805 373 chr2L 19359180 19359209 chr2L 19359273 19359302 12 93 2.5 1.5 2.0 4.0 122 chr2L 19359180 intron dnt - chr2L 19359241 intron dnt - chr2L 19359302 intron dnt - chr2L_12_19355001 chr2L_19355001 RAL-805 374 chr2L 19382622 19382643 chr2L 19382699 19382720 4 76 6.5 5.0 5.8 0.6 98 chr2L 19382622 exon CG17350 + chr2L 19382671 exon CG17350 + chr2L 19382720 exon CG17350 + chr2L_4_19380001 chr2L_19380001 RAL-805 375 chr2L 19405349 19405639 chr2L 19405479 19405729 11 115 0.5 0.5 0.5 7.3 380 chr2L 19405349 intron Pax - chr2L 19405539 intron Pax - chr2L 19405729 intron Pax - chr2L_11_19405001 chr2L_19405001 RAL-805 376 chr2L 19441065 19441074 chr2L 19441142 19441151 5 77 4.5 5.5 5.0 0.8 86 chr2L 19441065 intron CG10237 - chr2L 19441108 intron CG10237 - chr2L 19441151 intron CG10237 - chr2L_5_19440001 chr2L_19440001 RAL-805 377 chr2L 19487206 19487218 chr2L 19487293 19487304 4 86 4.5 2.5 3.5 0.9 98 chr2L 19487206 intergenic CG13083 + chr2L 19487255 intergenic CG13083 + chr2L 19487304 intergenic CG13083 + chr2L_4_19485001 chr2L_19485001 RAL-805 378 chr2L 19487223 19487238 chr2L 19487292 19487325 9 85 4.0 2.5 3.2 2.1 102 chr2L 19487223 intergenic CG13083 + chr2L 19487274 intergenic CG13083 + chr2L 19487325 intergenic CG13083 + chr2L_9_19485001 chr2L_19485001 RAL-805 379 chr2L 19550957 19550976 chr2L 19551046 19551065 10 89 4.0 2.5 3.2 2.4 108 chr2L 19550957 intron Tep4 + chr2L 19551011 intron Tep4 + chr2L 19551065 intron Tep4 + chr2L_10_19550001 chr2L_19550001 RAL-805 380 chr2L 19558518 19558545 chr2L 19558622 19558649 8 104 2.0 3.0 2.5 2.3 131 chr2L 19558518 intron Tep5 + chr2L 19558584 intron Tep5 + chr2L 19558649 intron Tep5 + chr2L_8_19555001 chr2L_19555001 RAL-805 381 chr2L 19560024 19560037 chr2L 19560276 19560289 5 252 4.0 7.0 5.5 0.8 265 chr2L 19560024 exon Tep5 + chr2L 19560156 exon Tep5 + chr2L 19560289 intron Tep5 + chr2L_5_19560001 chr2L_19560001 RAL-805 382 chr2L 19560833 19560864 chr2L 19560913 19560944 10 80 3.0 0.5 1.8 3.6 111 chr2L 19560833 intron Tep5 + chr2L 19560888 exon Tep5 + chr2L 19560944 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-805 383 chr2L 19620099 19620128 chr2L 19621078 19621117 jockey 10 987 2.0 2.5 2.2 3.1 1018 chr2L 19620099 intron Lar + chr2L 19620608 intron Lar + chr2L 19621117 intron Lar + chr2L_10_19620001 chr2L_19620001 RAL-805 384 chr2L 19693807 19694063 chr2L 19693899 19694191 8 96 1.0 4.5 2.8 2.1 384 chr2L 19693807 intron Lar + chr2L 19693999 intron Lar + chr2L 19694191 intron Lar + chr2L_8_19690001 chr2L_19690001 RAL-805 385 chr2L 19703536 19703569 chr2L 19712672 19712705 roo 9 9136 5.5 5.5 5.5 1.4 9169 chr2L 19703536 intron Lar + chr2L 19708120 intron Lar + chr2L 19712705 intron Lar + chr2L_9_19705001 chr2L_19705001 RAL-805 386 chr2L 19821796 19821821 chr2L 19821873 19821898 10 77 3.0 1.5 2.2 3.1 102 chr2L 19821796 intron sick + chr2L 19821847 intron sick + chr2L 19821898 intron sick + chr2L_10_19820001 chr2L_19820001 RAL-805 387 chr2L 19824416 19824435 chr2L 19824498 19824518 5 83 1.5 5.0 3.2 1.2 102 chr2L 19824416 intron sick + chr2L 19824467 intron sick + chr2L 19824518 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-805 388 chr2L 19964833 19964867 chr2L 19964918 19964953 10 82 5.0 3.5 4.2 1.9 120 chr2L 19964833 intron CG10680 + chr2L 19964893 exon CG10680 + chr2L 19964953 exon CG10680 + chr2L_10_19960001 chr2L_19960001 RAL-805 389 chr2L 19994651 19994685 chr2L 19994729 19994747 5 74 2.5 1.0 1.8 1.8 96 chr2L 19994651 intron CG43861 - chr2L 19994699 intron CG43861 - chr2L 19994747 intron CG43861 - chr2L_5_19990001 chr2L_19990001 RAL-805 390 chr2L 20069525 20069559 chr2L 20069605 20069639 7 79 4.0 5.0 4.5 1.3 114 chr2L 20069525 intron bwa + chr2L 20069582 intron bwa + chr2L 20069639 intron bwa + chr2L_7_20065001 chr2L_20065001 RAL-805 391 chr2L 20079514 20079546 chr2L 20079635 20079667 9 120 2.0 0.5 1.2 4.1 153 chr2L 20079514 intron,intron neb +,fok - chr2L 20079590 intron,intron neb +,fok - chr2L 20079667 intron,intron neb +,fok - chr2L_9_20075001 chr2L_20075001 RAL-805 392 chr2L 20124333 20124342 chr2L 20124411 20124420 7 78 3.0 1.0 2.0 2.3 87 chr2L 20124333 intergenic not near genes chr2L 20124376 intergenic not near genes chr2L 20124420 intergenic not near genes chr2L_7_20120001 chr2L_20120001 RAL-805 393 chr2L 20127995 20128007 chr2L 20128079 20128091 6 84 1.5 2.0 1.8 2.1 96 chr2L 20127995 intergenic not near genes chr2L 20128043 intergenic not near genes chr2L 20128091 intergenic not near genes chr2L_6_20125001 chr2L_20125001 RAL-805 394 chr2L 20272112 20272145 chr2L 20282823 20282856 copia 8 10711 3.5 3.5 3.5 1.8 10744 chr2L 20272112 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282856 intergenic not near genes chr2L_8_20275001 chr2L_20275001 RAL-805 395 chr2L 20296507 20296540 chr2L 20296588 20296621 12 80 0.0 1.0 0.5 8.0 114 chr2L 20296507 intergenic CR43414 - chr2L 20296564 intergenic CR43414 - chr2L 20296621 intergenic CR43414 - chr2L_12_20295001 chr2L_20295001 RAL-805 396 chr2L 20302201 20302224 chr2L 20302280 20302303 9 79 3.5 1.5 2.5 2.6 102 chr2L 20302201 intergenic not near genes chr2L 20302252 intergenic not near genes chr2L 20302303 intergenic not near genes chr2L_9_20300001 chr2L_20300001 RAL-805 397 chr2L 20303165 20303187 chr2L 20310633 20310637 blood 8 7466 1.0 2.0 1.5 3.2 7472 chr2L 20303165 intergenic not near genes chr2L 20306901 intergenic not near genes chr2L 20310637 intergenic not near genes chr2L_8_20305001 chr2L_20305001 RAL-805 398 chr2L 20310883 20310920 chr2L 20310963 20310999 5 79 0.5 5.0 2.8 1.3 116 chr2L 20310883 intergenic spir + chr2L 20310941 intergenic spir + chr2L 20310999 intergenic spir + chr2L_5_20310001 chr2L_20310001 RAL-805 399 chr2L 20383439 20383471 chr2L 20383531 20383563 13 92 2.0 1.0 1.5 5.2 124 chr2L 20383439 intergenic not near genes chr2L 20383501 intergenic not near genes chr2L 20383563 intergenic not near genes chr2L_13_20380001 chr2L_20380001 RAL-805 400 chr2L 20396812 20396828 chr2L 20396888 20396904 4 76 0.5 2.0 1.2 1.8 92 chr2L 20396812 intron CG10947 - chr2L 20396858 intron CG10947 - chr2L 20396904 intron CG10947 - chr2L_4_20395001 chr2L_20395001 RAL-805 401 chr2L 20498116 20498139 chr2L 20498331 20498354 10 215 3.5 3.0 3.2 2.4 238 chr2L 20498116 intergenic not near genes chr2L 20498235 intergenic not near genes chr2L 20498354 intergenic not near genes chr2L_10_20495001 chr2L_20495001 RAL-805 402 chr2L 20553185 20553219 chr2L 20553261 20553295 9 74 2.0 2.5 2.2 2.8 110 chr2L 20553185 intergenic not near genes chr2L 20553240 intergenic not near genes chr2L 20553295 intergenic not near genes chr2L_9_20550001 chr2L_20550001 RAL-805 403 chr2L 20568668 20568687 chr2L 20569056 20569075 X-element 6 389 2.0 2.5 2.2 1.9 407 chr2L 20568668 intron CR45347 + chr2L 20568872 intron CR45347 + chr2L 20569075 intron CR45347 + chr2L_6_20565001 chr2L_20565001 RAL-805 404 chr2L 20576217 20576251 chr2L 20583685 20583719 blood 11 7467 3.5 1.5 2.5 3.1 7502 chr2L 20576217 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583719 3` UTR CR44909 - chr2L_11_20575001 chr2L_20575001 RAL-805 405 chr2L 20817843 20817870 chr2L 20817916 20817948 9 76 4.5 4.0 4.2 1.7 105 chr2L 20817843 exon CheB38a - chr2L 20817896 exon CheB38a - chr2L 20817948 exon CheB38a - chr2L_9_20815001 chr2L_20815001 RAL-805 406 chr2L 20835823 20835837 chr2L 20836540 20836554 Quasimodo 6 717 1.5 3.5 2.5 1.7 731 chr2L 20835823 5` UTR Oseg5 - chr2L 20836188 intergenic Oseg5 -,Spn38F - chr2L 20836554 intergenic Spn38F - chr2L_6_20835001 chr2L_20835001 RAL-805 407 chr2L 20891536 20891545 chr2L 20896636 20896646 jockey 4 5101 2.5 3.5 3.0 1.0 5110 chr2L 20891536 intron,intron CG43739 -,sky - chr2L 20894091 intron,intron CG43739 -,sky - chr2L 20896646 intron,intron CG43739 -,sky - chr2L_4_20890001 chr2L_20890001 RAL-805 408 chr2L 20946947 20946959 chr2L 20947034 20947046 6 87 4.0 5.0 4.5 1.1 99 chr2L 20946947 intergenic CR44606 - chr2L 20946996 intergenic CR44606 - chr2L 20947046 intergenic CR44606 - chr2L_6_20945001 chr2L_20945001 RAL-805 409 chr2L 20976642 20976673 chr2L 20981457 20981486 X-element 10 4814 2.0 1.0 1.5 4.0 4844 chr2L 20976642 intron CG42238 - chr2L 20979064 intron CG42238 - chr2L 20981486 intron CG42238 - chr2L_10_20975001 chr2L_20975001 RAL-805 410 chr2L 21020272 21020310 chr2L 21023949 21023987 NOF 13 3677 1.5 3.5 2.5 3.7 3715 chr2L 21020272 intron CG42238 - chr2L 21022130 intron CG42238 - chr2L 21023987 intron CG42238 - chr2L_13_21020001 chr2L_21020001 RAL-805 411 chr2L 21041136 21041160 chr2L 21049396 21049421 Tirant 7 8261 5.5 3.5 4.5 1.3 8285 chr2L 21041136 intron CG42238 - chr2L 21045278 intron CG42238 - chr2L 21049421 intron CG42238 - chr2L_7_21045001 chr2L_21045001 RAL-805 412 chr2L 21355602 21355624 chr2L 21355747 21355769 4 144 1.0 0.5 0.8 2.2 167 chr2L 21355602 intron Tsp39D + chr2L 21355686 intron Tsp39D + chr2L 21355769 intron Tsp39D + chr2L_4_21355001 chr2L_21355001 RAL-805 413 chr2L 21711994 21712021 chr2L 21712073 21712100 4 79 1.0 4.0 2.5 1.1 106 chr2L 21711994 intron CG31619 + chr2L 21712047 intron CG31619 + chr2L 21712100 intron CG31619 + chr2L_4_21710001 chr2L_21710001 RAL-805 414 chr2L 21771228 21771259 chr2L 21771335 21771366 13 107 1.5 2.0 1.8 4.6 138 chr2L 21771228 intron CG31612 - chr2L 21771297 intron CG31612 - chr2L 21771366 intron CG31612 - chr2L_13_21770001 chr2L_21770001 RAL-805 415 chr2L 21806226 21806257 chr2L 21806329 21806359 12 102 4.5 1.0 2.8 3.2 133 chr2L 21806226 intergenic not near genes chr2L 21806292 intergenic not near genes chr2L 21806359 intergenic not near genes chr2L_12_21805001 chr2L_21805001 RAL-805 416 chr2L 21855475 21855507 chr2L 21855561 21855593 5 86 4.5 3.0 3.8 1.0 118 chr2L 21855475 intron CR44917 + chr2L 21855534 intron CR44917 + chr2L 21855593 intron CR44917 + chr2L_5_21855001 chr2L_21855001 RAL-805 417 chr2L 21859318 21859352 chr2L 21859397 21859432 22 74 3.0 2.5 2.8 5.8 114 chr2L 21859318 intron CR44917 + chr2L 21859375 intron CR44917 + chr2L 21859432 intron CR44917 + chr2L_22_21855001 chr2L_21855001 RAL-805 418 chr2L 21981682 21981714 chr2L 21990847 21990878 roo 12 9164 2.5 6.5 4.5 2.2 9196 chr2L 21981682 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990878 exon CG2528 - chr2L_12_21985001 chr2L_21985001 RAL-805 419 chr2L 22212140 22212150 chr2L 22212687 22212696 7 547 4.0 2.0 3.0 1.8 556 chr2L 22212140 intron Ir40a - chr2L 22212418 intron Ir40a - chr2L 22212696 intron Ir40a - chr2L_7_22210001 chr2L_22210001 RAL-805 420 chr2L 22215910 22215935 chr2L 22215996 22216021 4 86 3.0 6.0 4.5 0.7 111 chr2L 22215910 intergenic not near genes chr2L 22215966 intergenic not near genes chr2L 22216021 intergenic not near genes chr2L_4_22215001 chr2L_22215001 RAL-805 421 chr2L 22239432 22239461 chr2L 22239513 22239542 14 79 3.5 4.0 3.8 2.9 110 chr2L 22239432 3` UTR CR43765 - chr2L 22239487 3` UTR CR43765 - chr2L 22239542 3` UTR CR43765 - chr2L_14_22235001 chr2L_22235001 RAL-805 422 chr2L 22294363 22294381 chr2L 22294451 22294469 5 88 1.0 1.5 1.2 2.3 106 chr2L 22294363 intergenic not near genes chr2L 22294416 intergenic not near genes chr2L 22294469 intergenic not near genes chr2L_5_22290001 chr2L_22290001 RAL-805 423 chr2L 22490515 22490531 chr2L 22497641 22497647 springer 6 7122 7.0 7.0 7.0 0.8 7132 chr2L 22490515 intergenic not near genes chr2L 22494081 intergenic not near genes chr2L 22497647 intergenic not near genes chr2L_6_22490001 chr2L_22490001 RAL-805 424 chr2L 22548921 22548945 chr2L 22550146 22550163 1360 8 1223 0.5 6.5 3.5 1.8 1242 chr2L 22548921 intergenic CG17490 + chr2L 22549542 intergenic not near genes chr2L 22550163 intergenic CG17493 + chr2L_8_22545001 chr2L_22545001 RAL-805 425 chr2L 22679803 22679832 chr2L 22684563 22684580 F-element 9 4768 1.5 2.0 1.8 3.2 4777 chr2L 22679803 intron CG40006 - chr2L 22682192 intron CG40006 - chr2L 22684580 intron CG40006 - chr2L_9_22680001 chr2L_22680001 RAL-805 426 chr2L 22725059 22725075 chr2L 22725122 22725154 5 76 3.5 1.0 2.2 1.6 95 chr2L 22725059 intron CG40006 - chr2L 22725106 intron CG40006 - chr2L 22725154 intron CG40006 - chr2L_5_22725001 chr2L_22725001 RAL-805 427 chr2R 529321 529349 chr2R 537946 537974 Max-element 6 8624 3.5 3.0 3.2 1.4 8653 chr2R 529321 intron CG40378 + chr2R 533648 intron CG40378 + chr2R 537974 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-805 428 chr2R 1684833 1684844 chr2R 1684938 1684946 4 104 2.5 4.0 3.2 1.0 113 chr2R 1684833 intron CG41520 + chr2R 1684890 intron CG41520 + chr2R 1684946 intron CG41520 + chr2R_4_1680001 chr2R_1680001 RAL-805 429 chr2R 2498991 2498999 chr2R 2508138 2508146 roo 5 9146 11.0 3.0 7.0 0.6 9155 chr2R 2498991 intron MFS17 - chr2R 2503568 intron MFS17 - chr2R 2508146 intron MFS17 - chr2R_5_2500001 chr2R_2500001 RAL-805 430 chr2R 3144091 3144108 chr2R 3393369 3393386 Doc 8 249278 13.0 19.5 16.2 0.5 249295 chr2R 3144091 intron CG42596 + chr2R 3268738 intergenic not near genes chr2R 3393386 intergenic not near genes chr2R_8_3265001 chr2R_3265001 RAL-805 431 chr2R 3291934 3292100 chr2R 3915103 3915261 4 623165 3.5 18.5 11.0 0.3 623327 chr2R 3291934 intergenic not near genes chr2R 3603598 intergenic not near genes chr2R 3915261 intron uex - chr2R_4_3600001 chr2R_3600001 RAL-805 432 chr2R 4239170 4239204 chr2R 4239288 4239322 9 118 0.5 2.0 1.2 4.1 152 chr2R 4239170 intron IntS3 - chr2R 4239246 intron IntS3 - chr2R 4239322 intron IntS3 - chr2R_9_4235001 chr2R_4235001 RAL-805 433 chr2R 4580191 4580227 chr2R 4580818 4580824 15 624 4.0 4.0 4.0 3.0 633 chr2R 4580191 intergenic not near genes chr2R 4580508 intergenic not near genes chr2R 4580824 intergenic not near genes chr2R_15_4580001 chr2R_4580001 RAL-805 434 chr2R 4604550 4604583 chr2R 4604628 4604662 8 79 3.5 4.5 4.0 1.6 112 chr2R 4604550 intron p120ctn + chr2R 4604606 intron p120ctn + chr2R 4604662 intron p120ctn + chr2R_8_4600001 chr2R_4600001 RAL-805 435 chr2R 4628032 4628066 chr2R 4628113 4628146 6 79 1.5 3.5 2.5 1.7 114 chr2R 4628032 intergenic not near genes chr2R 4628089 intergenic not near genes chr2R 4628146 intergenic not near genes chr2R_6_4625001 chr2R_4625001 RAL-805 436 chr2R 4656782 4656804 chr2R 4656992 4657014 4 210 21.0 12.0 16.5 0.2 232 chr2R 4656782 intergenic not near genes chr2R 4656898 intergenic not near genes chr2R 4657014 intergenic not near genes chr2R_4_4655001 chr2R_4655001 RAL-805 437 chr2R 4900687 4900692 chr2R 4900793 4900798 4 106 1.5 4.0 2.8 1.1 111 chr2R 4900687 intron CG44102 - chr2R 4900742 intron CG44102 - chr2R 4900798 intron CG44102 - chr2R_4_4900001 chr2R_4900001 RAL-805 438 chr2R 5019283 5019312 chr2R 5019369 5019397 12 85 2.0 6.0 4.0 2.4 114 chr2R 5019283 intron Ir41a + chr2R 5019340 intron Ir41a + chr2R 5019397 intron Ir41a + chr2R_12_5015001 chr2R_5015001 RAL-805 439 chr2R 5038531 5038536 chr2R 5039325 5039330 4 795 7.0 3.0 5.0 0.7 799 chr2R 5038531 intergenic not near genes chr2R 5038930 intergenic not near genes chr2R 5039330 intergenic not near genes chr2R_4_5035001 chr2R_5035001 RAL-805 440 chr2R 5040749 5040758 chr2R 5041242 5041250 4 493 0.0 2.0 1.0 2.0 501 chr2R 5040749 intergenic not near genes chr2R 5041000 intergenic not near genes chr2R 5041250 intergenic not near genes chr2R_4_5040001 chr2R_5040001 RAL-805 441 chr2R 5075221 5075253 chr2R 5075349 5075365 10 126 4.0 0.0 2.0 3.3 144 chr2R 5075221 intergenic not near genes chr2R 5075293 intergenic not near genes chr2R 5075365 intergenic not near genes chr2R_10_5075001 chr2R_5075001 RAL-805 442 chr2R 5075349 5075374 chr2R 5075765 5075790 12 415 0.0 3.0 1.5 4.8 441 chr2R 5075349 intergenic not near genes chr2R 5075570 intergenic not near genes chr2R 5075790 intergenic not near genes chr2R_12_5075001 chr2R_5075001 RAL-805 443 chr2R 5080793 5080814 chr2R 5080884 5080905 17 90 3.0 3.5 3.2 4.0 112 chr2R 5080793 intergenic not near genes chr2R 5080849 intergenic not near genes chr2R 5080905 intergenic not near genes chr2R_17_5080001 chr2R_5080001 RAL-805 444 chr2R 5237354 5237367 chr2R 5237436 5237449 4 82 2.0 0.0 1.0 2.0 95 chr2R 5237354 intron Nipped-A - chr2R 5237402 intron Nipped-A - chr2R 5237449 intron Nipped-A - chr2R_4_5235001 chr2R_5235001 RAL-805 445 chr2R 5303489 5303505 chr2R 5303576 5303593 7 88 3.5 1.5 2.5 2.0 104 chr2R 5303489 intergenic not near genes chr2R 5303541 intergenic not near genes chr2R 5303593 intergenic not near genes chr2R_7_5300001 chr2R_5300001 RAL-805 446 chr2R 5417992 5418022 chr2R 5420624 5420654 Burdock 7 2632 1.0 3.5 2.2 2.2 2662 chr2R 5417992 intron laccase2 + chr2R 5419323 intron laccase2 + chr2R 5420654 intron laccase2 + chr2R_7_5415001 chr2R_5415001 RAL-805 447 chr2R 5472365 5472392 chr2R 5472460 5472487 7 94 3.5 5.0 4.2 1.3 122 chr2R 5472365 intron CG30440 - chr2R 5472426 intron CG30440 - chr2R 5472487 intron CG30440 - chr2R_7_5470001 chr2R_5470001 RAL-805 448 chr2R 5509521 5509545 chr2R 5509617 5509641 7 96 2.0 3.5 2.8 1.8 120 chr2R 5509521 intron CG30438 + chr2R 5509581 intron CG30438 + chr2R 5509641 intron CG30438 + chr2R_7_5505001 chr2R_5505001 RAL-805 449 chr2R 5712410 5712435 chr2R 5712608 5712636 4 198 2.5 2.5 2.5 1.1 226 chr2R 5712410 intron ap - chr2R 5712523 intron ap - chr2R 5712636 intron ap - chr2R_4_5710001 chr2R_5710001 RAL-805 450 chr2R 5861288 5861320 chr2R 5861409 5861441 10 120 3.0 3.5 3.2 2.4 153 chr2R 5861288 intergenic dpr12 + chr2R 5861364 intergenic not near genes chr2R 5861441 intergenic not near genes chr2R_10_5860001 chr2R_5860001 RAL-805 451 chr2R 5869274 5869309 chr2R 5874350 5874385 flea 21 5075 3.0 1.0 2.0 7.0 5111 chr2R 5869274 intergenic not near genes chr2R 5871830 intergenic not near genes chr2R 5874385 intergenic not near genes chr2R_21_5870001 chr2R_5870001 RAL-805 452 chr2R 5885240 5885370 chr2R 5885323 5885499 8 94 4.5 5.0 4.8 1.4 259 chr2R 5885240 5` UTR CR44125 + chr2R 5885370 5` UTR CR44125 + chr2R 5885499 5` UTR CR44125 + chr2R_8_5885001 chr2R_5885001 RAL-805 453 chr2R 6096745 6096750 chr2R 6101915 6101925 BS 4 5178 4.5 1.0 2.8 1.1 5180 chr2R 6096745 intron EcR - chr2R 6099335 intron EcR - chr2R 6101925 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-805 454 chr2R 6129328 6129358 chr2R 6129406 6129435 7 78 0.5 3.0 1.8 2.5 107 chr2R 6129328 intron EcR - chr2R 6129382 intron EcR - chr2R 6129435 intron EcR - chr2R_7_6125001 chr2R_6125001 RAL-805 455 chr2R 6168199 6168222 chr2R 6168281 6168304 4 82 1.5 2.5 2.0 1.3 105 chr2R 6168199 intron EcR - chr2R 6168252 intron EcR - chr2R 6168304 intron EcR - chr2R_4_6165001 chr2R_6165001 RAL-805 456 chr2R 6194687 6194702 chr2R 6194770 6194785 6 82 5.0 6.0 5.5 0.9 98 chr2R 6194687 intron Ptr - chr2R 6194736 intron Ptr - chr2R 6194785 intron Ptr - chr2R_6_6190001 chr2R_6190001 RAL-805 457 chr2R 6494548 6494555 chr2R 6499299 6499316 F-element 4 4759 1.0 2.0 1.5 1.6 4768 chr2R 6494548 intergenic not near genes chr2R 6496932 intergenic not near genes chr2R 6499316 intergenic not near genes chr2R_4_6495001 chr2R_6495001 RAL-805 458 chr2R 6530767 6530784 chr2R 6530847 6530864 7 80 1.0 0.0 0.5 4.7 97 chr2R 6530767 intron jing + chr2R 6530816 intron jing + chr2R 6530864 intron jing + chr2R_7_6530001 chr2R_6530001 RAL-805 459 chr2R 6541071 6541106 chr2R 6541147 6541182 8 75 1.5 2.5 2.0 2.7 111 chr2R 6541071 intron jing + chr2R 6541126 intron jing + chr2R 6541182 intron jing + chr2R_8_6540001 chr2R_6540001 RAL-805 460 chr2R 6551994 6552018 chr2R 6552097 6552121 9 103 1.5 0.5 1.0 4.5 127 chr2R 6551994 intron jing + chr2R 6552058 intron jing + chr2R 6552121 intron jing + chr2R_9_6550001 chr2R_6550001 RAL-805 461 chr2R 6579778 6579792 chr2R 6584864 6584877 flea 4 5086 2.0 1.5 1.8 1.4 5099 chr2R 6579778 intron jing + chr2R 6582328 intron jing + chr2R 6584877 intron jing + chr2R_4_6580001 chr2R_6580001 RAL-805 462 chr2R 6612128 6612155 chr2R 6612208 6612235 13 79 2.5 2.0 2.2 4.1 107 chr2R 6612128 intron jing + chr2R 6612182 intron jing + chr2R 6612235 intron jing + chr2R_13_6610001 chr2R_6610001 RAL-805 463 chr2R 6646802 6646827 chr2R 6647072 6647078 11 269 4.5 1.0 2.8 2.9 276 chr2R 6646802 intergenic not near genes chr2R 6646940 intergenic not near genes chr2R 6647078 intergenic not near genes chr2R_11_6645001 chr2R_6645001 RAL-805 464 chr2R 6647340 6647352 chr2R 6647416 6647428 8 76 3.5 3.5 3.5 1.8 88 chr2R 6647340 intergenic not near genes chr2R 6647384 intergenic not near genes chr2R 6647428 intergenic not near genes chr2R_8_6645001 chr2R_6645001 RAL-805 465 chr2R 6857077 6857102 chr2R 6857197 6857211 8 118 5.0 5.0 5.0 1.3 134 chr2R 6857077 intergenic not near genes chr2R 6857144 intergenic not near genes chr2R 6857211 intergenic not near genes chr2R_8_6855001 chr2R_6855001 RAL-805 466 chr2R 6962449 6962481 chr2R 6962806 6962838 13 357 3.5 4.0 3.8 2.7 389 chr2R 6962449 intron,intron mim -,CheB42c - chr2R 6962644 intron,intron mim -,CheB42c - chr2R 6962838 intron,intron mim -,CheB42c - chr2R_13_6960001 chr2R_6960001 RAL-805 467 chr2R 7153162 7153192 chr2R 7153248 7153250 4 79 3.5 4.0 3.8 0.8 88 chr2R 7153162 intron,intron pk +,Spn43Ab - chr2R 7153206 intron,intron pk +,Spn43Ab - chr2R 7153250 intron,intron pk +,Spn43Ab - chr2R_4_7150001 chr2R_7150001 RAL-805 468 chr2R 7235818 7235852 chr2R 7240910 7240944 jockey 16 5091 1.5 5.0 3.2 3.8 5126 chr2R 7235818 intergenic not near genes chr2R 7238381 intergenic not near genes chr2R 7240944 intergenic not near genes chr2R_16_7235001 chr2R_7235001 RAL-805 469 chr2R 7393370 7393397 chr2R 7393460 7393475 5 82 4.0 1.0 2.5 1.4 105 chr2R 7393370 intergenic CG1707 -,Gr43a - chr2R 7393422 intergenic CG1707 -,Gr43a - chr2R 7393475 intergenic CG1707 -,Gr43a - chr2R_5_7390001 chr2R_7390001 RAL-805 470 chr2R 7434899 7434916 chr2R 7439200 7439209 Juan 4 4299 2.5 6.0 4.2 0.8 4310 chr2R 7434899 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439209 intergenic not near genes chr2R_4_7435001 chr2R_7435001 RAL-805 471 chr2R 7459278 7459305 chr2R 7459366 7459392 7 88 2.5 1.0 1.8 2.5 114 chr2R 7459278 intergenic Inos -,CG11141 - chr2R 7459335 intergenic CG11141 -,Inos - chr2R 7459392 intergenic CG11141 - chr2R_7_7455001 chr2R_7455001 RAL-805 472 chr2R 7563099 7563126 chr2R 7563178 7563205 9 79 1.5 4.0 2.8 2.4 106 chr2R 7563099 3` UTR Corin + chr2R 7563152 3` UTR Corin + chr2R 7563205 3` UTR Corin + chr2R_9_7560001 chr2R_7560001 RAL-805 473 chr2R 7608411 7608438 chr2R 7613614 7613638 I-element 8 5203 2.0 4.0 3.0 2.0 5227 chr2R 7608411 intron CG1358 - chr2R 7611024 intron CG1358 - chr2R 7613638 intron CG1358 - chr2R_8_7610001 chr2R_7610001 RAL-805 474 chr2R 7642871 7642887 chr2R 7642951 7642967 8 80 3.5 3.0 3.2 1.9 96 chr2R 7642871 intron CG43340 + chr2R 7642919 intron CG43340 + chr2R 7642967 intron CG43340 + chr2R_8_7640001 chr2R_7640001 RAL-805 475 chr2R 7692017 7692038 chr2R 7692097 7692119 5 81 0.0 5.0 2.5 1.4 102 chr2R 7692017 intron CG1399 - chr2R 7692068 intron CG1399 - chr2R 7692119 intron CG1399 - chr2R_5_7690001 chr2R_7690001 RAL-805 476 chr2R 7694590 7694606 chr2R 7694674 7694690 4 84 2.5 5.0 3.8 0.8 100 chr2R 7694590 intron CG1399 - chr2R 7694640 intron CG1399 - chr2R 7694690 intron CG1399 - chr2R_4_7690001 chr2R_7690001 RAL-805 477 chr2R 7714080 7714117 chr2R 7714156 7714192 17 75 2.0 0.0 1.0 8.5 112 chr2R 7714080 exon CG1942 + chr2R 7714136 3` UTR CG1942 + chr2R 7714192 intergenic CG1942 + chr2R_17_7710001 chr2R_7710001 RAL-805 478 chr2R 7815672 7815705 chr2R 7822141 7822158 Burdock 7 6465 3.0 4.5 3.8 1.5 6486 chr2R 7815672 intergenic CG1882 + chr2R 7818915 intergenic not near genes chr2R 7822158 3` UTR cathD - chr2R_7_7815001 chr2R_7815001 RAL-805 479 chr2R 7851262 7851293 chr2R 7851348 7851379 11 85 1.5 3.5 2.5 3.1 117 chr2R 7851262 intron Dgk - chr2R 7851320 intron Dgk - chr2R 7851379 intron Dgk - chr2R_11_7850001 chr2R_7850001 RAL-805 480 chr2R 7869197 7869217 chr2R 7873978 7874003 Doc 8 4785 3.0 2.5 2.8 2.1 4806 chr2R 7869197 intron Dgk - chr2R 7871600 intron Dgk - chr2R 7874003 intron Dgk - chr2R_8_7870001 chr2R_7870001 RAL-805 481 chr2R 7897140 7897152 chr2R 7897228 7897241 7 89 0.0 9.5 4.8 1.2 101 chr2R 7897140 intron CG30377 + chr2R 7897190 intron CG30377 + chr2R 7897241 intron CG30377 + chr2R_7_7895001 chr2R_7895001 RAL-805 482 chr2R 7916431 7916456 chr2R 7916512 7916537 6 83 4.5 4.5 4.5 1.1 106 chr2R 7916431 5` UTR CG12159 - chr2R 7916484 intergenic CG12159 -,Cul1 + chr2R 7916537 intergenic CG12159 -,Cul1 + chr2R_6_7915001 chr2R_7915001 RAL-805 483 chr2R 8015652 8015683 chr2R 8017672 8017706 6 2022 0.5 3.5 2.0 2.0 2054 chr2R 8015652 intergenic mir-4981 + chr2R 8016679 intergenic not near genes chr2R 8017706 intergenic not near genes chr2R_6_8015001 chr2R_8015001 RAL-805 484 chr2R 8036260 8036273 chr2R 8036342 8036349 7 81 6.5 1.5 4.0 1.4 89 chr2R 8036260 intron Optix + chr2R 8036304 intron Optix + chr2R 8036349 intron Optix + chr2R_7_8035001 chr2R_8035001 RAL-805 485 chr2R 8067063 8067098 chr2R 8067147 8067182 10 83 0.0 3.0 1.5 4.0 119 chr2R 8067063 intron CG17977 - chr2R 8067122 intron CG17977 - chr2R 8067182 exon CG17977 - chr2R_10_8065001 chr2R_8065001 RAL-805 486 chr2R 8076682 8076707 chr2R 8076762 8076787 9 80 6.0 3.5 4.8 1.6 105 chr2R 8076682 intron lig + chr2R 8076734 intron lig + chr2R 8076787 intron lig + chr2R_9_8075001 chr2R_8075001 RAL-805 487 chr2R 8089254 8089286 chr2R 8089340 8089372 8 86 2.5 1.0 1.8 2.9 118 chr2R 8089254 3` UTR sut2 + chr2R 8089313 intergenic sut2 +,sut3 + chr2R 8089372 intergenic sut2 +,sut3 + chr2R_8_8085001 chr2R_8085001 RAL-805 488 chr2R 8151607 8151641 chr2R 8151687 8151721 12 78 1.0 4.0 2.5 3.4 114 chr2R 8151607 intron,intron Lpin -,kermit - chr2R 8151664 intron,intron Lpin -,kermit - chr2R 8151721 intron,intron Lpin -,kermit - chr2R_12_8150001 chr2R_8150001 RAL-805 489 chr2R 8203760 8203776 chr2R 8203852 8203868 5 92 0.5 1.5 1.0 2.5 108 chr2R 8203760 intron LRP1 + chr2R 8203814 intron LRP1 + chr2R 8203868 intron LRP1 + chr2R_5_8200001 chr2R_8200001 RAL-805 490 chr2R 8329450 8329480 chr2R 8329534 8329564 16 83 2.0 2.0 2.0 5.3 114 chr2R 8329450 intron pdm3 + chr2R 8329507 intron pdm3 + chr2R 8329564 intron pdm3 + chr2R_16_8325001 chr2R_8325001 RAL-805 491 chr2R 8330861 8330894 chr2R 8331347 8331380 roo 11 483 5.5 1.5 3.5 2.4 519 chr2R 8330861 intron pdm3 + chr2R 8331120 intron pdm3 + chr2R 8331380 intron pdm3 + chr2R_11_8330001 chr2R_8330001 RAL-805 492 chr2R 8452908 8452932 chr2R 8452989 8453011 6 81 2.5 3.0 2.8 1.6 103 chr2R 8452908 intergenic not near genes chr2R 8452960 intergenic not near genes chr2R 8453011 intergenic not near genes chr2R_6_8450001 chr2R_8450001 RAL-805 493 chr2R 8483966 8483988 chr2R 8484042 8484042 5 71 3.0 3.5 3.2 1.2 76 chr2R 8483966 intron mtt - chr2R 8484004 intron mtt - chr2R 8484042 intron mtt - chr2R_5_8480001 chr2R_8480001 RAL-805 494 chr2R 8565385 8565404 chr2R 8565463 8565468 8 74 2.0 6.0 4.0 1.6 83 chr2R 8565385 exon Cyp6a14 - chr2R 8565426 exon Cyp6a14 - chr2R 8565468 exon Cyp6a14 - chr2R_8_8565001 chr2R_8565001 RAL-805 495 chr2R 8566032 8566062 chr2R 8566984 8567014 1360 16 952 5.0 9.5 7.2 2.0 982 chr2R 8566032 5` UTR Cyp6a14 - chr2R 8566523 5` UTR Cyp6a14 - chr2R 8567014 5` UTR Cyp6a14 - chr2R_16_8565001 chr2R_8565001 RAL-805 496 chr2R 8722767 8722795 chr2R 8723003 8723009 pogo 8 235 3.0 3.0 3.0 2.0 242 chr2R 8722767 intron CG14767 - chr2R 8722888 intron CG14767 - chr2R 8723009 intron CG14767 - chr2R_8_8720001 chr2R_8720001 RAL-805 497 chr2R 8964849 8964876 chr2R 8964931 8964958 6 82 3.5 1.5 2.5 1.7 109 chr2R 8964849 intron CG8216 - chr2R 8964904 intron CG8216 - chr2R 8964958 intron CG8216 - chr2R_6_8960001 chr2R_8960001 RAL-805 498 chr2R 9047425 9047437 chr2R 9047520 9047532 4 95 0.0 5.5 2.8 1.1 107 chr2R 9047425 intron CG13743 - chr2R 9047478 intron CG13743 - chr2R 9047532 intron CG13743 - chr2R_4_9045001 chr2R_9045001 RAL-805 499 chr2R 9052715 9052738 chr2R 9052796 9052819 9 81 0.0 8.0 4.0 1.8 104 chr2R 9052715 intron CG13743 - chr2R 9052767 intron CG13743 - chr2R 9052819 intron CG13743 - chr2R_9_9050001 chr2R_9050001 RAL-805 500 chr2R 9076144 9076168 chr2R 9076220 9076244 6 76 0.0 1.5 0.8 3.3 100 chr2R 9076144 intron ana + chr2R 9076194 intron ana + chr2R 9076244 intron ana + chr2R_6_9075001 chr2R_9075001 RAL-805 501 chr2R 9151300 9151333 chr2R 9157770 9157803 Burdock 9 6470 2.0 0.5 1.2 4.1 6503 chr2R 9151300 exon CG30345 + chr2R 9154552 intergenic not near genes chr2R 9157803 intergenic CG8008 - chr2R_9_9150001 chr2R_9150001 RAL-805 502 chr2R 9237591 9237622 chr2R 9237974 9238005 9 383 2.0 1.5 1.8 3.2 414 chr2R 9237591 intron,exon hig -,Cyp4p2 + chr2R 9237798 intron,intron hig -,Cyp4p2 + chr2R 9238005 intron,exon hig -,Cyp4p2 + chr2R_9_9235001 chr2R_9235001 RAL-805 503 chr2R 9267976 9268013 chr2R 9268062 9268099 10 86 2.5 1.5 2.0 3.3 123 chr2R 9267976 exon Pkn - chr2R 9268038 intron Pkn - chr2R 9268099 intron Pkn - chr2R_10_9265001 chr2R_9265001 RAL-805 504 chr2R 9272983 9273003 chr2R 9273100 9273118 5 114 0.0 2.0 1.0 2.5 135 chr2R 9272983 intron Pkn - chr2R 9273050 intron Pkn - chr2R 9273118 intron Pkn - chr2R_5_9270001 chr2R_9270001 RAL-805 505 chr2R 9331310 9331341 chr2R 9331390 9331421 12 80 3.0 1.5 2.2 3.8 111 chr2R 9331310 intron,intron CG13739 -,CG13954 - chr2R 9331366 intron,intron CG13739 -,CG13954 - chr2R 9331421 intron,intron CG13739 -,CG13954 - chr2R_12_9330001 chr2R_9330001 RAL-805 506 chr2R 9368125 9368155 chr2R 9368201 9368231 9 73 3.5 0.0 1.8 3.2 106 chr2R 9368125 intron CG13954 - chr2R 9368178 intron CG13954 - chr2R 9368231 intron CG13954 - chr2R_9_9365001 chr2R_9365001 RAL-805 507 chr2R 9495886 9495909 chr2R 9496030 9496053 9 144 4.0 3.0 3.5 2.0 167 chr2R 9495886 intron Wnt2 + chr2R 9495970 intron Wnt2 + chr2R 9496053 intron Wnt2 + chr2R_9_9495001 chr2R_9495001 RAL-805 508 chr2R 9500449 9500483 chr2R 9500523 9500559 6 75 2.0 2.5 2.2 1.9 110 chr2R 9500449 intron Wnt2 + chr2R 9500504 intron Wnt2 + chr2R 9500559 intron Wnt2 + chr2R_6_9500001 chr2R_9500001 RAL-805 509 chr2R 9510670 9510694 chr2R 9510786 9510810 7 116 1.5 4.0 2.8 1.8 140 chr2R 9510670 intron brp + chr2R 9510740 intron brp + chr2R 9510810 intron brp + chr2R_7_9510001 chr2R_9510001 RAL-805 510 chr2R 9541628 9541650 chr2R 9541705 9541727 7 77 0.0 3.0 1.5 2.8 99 chr2R 9541628 intergenic brp +,CG1888 - chr2R 9541678 intergenic brp +,CG1888 - chr2R 9541727 intergenic brp +,CG1888 - chr2R_7_9540001 chr2R_9540001 RAL-805 511 chr2R 9605832 9605856 chr2R 9605939 9605962 6 107 3.0 4.5 3.8 1.2 130 chr2R 9605832 3` UTR CR44285 - chr2R 9605897 intergenic CR44285 -,GstT1 +,CG1902 + chr2R 9605962 intergenic GstT1 +,CR44285 -,CG1902 + chr2R_6_9605001 chr2R_9605001 RAL-805 512 chr2R 9726620 9726646 chr2R 9734171 9734197 17.6 6 7551 1.5 1.5 1.5 2.4 7577 chr2R 9726620 intron sqa - chr2R 9730408 intron sqa - chr2R 9734197 intron sqa - chr2R_6_9730001 chr2R_9730001 RAL-805 513 chr2R 9871045 9871072 chr2R 9871530 9871558 roo 7 483 1.0 5.5 3.2 1.7 513 chr2R 9871045 intron cbx - chr2R 9871302 intron cbx - chr2R 9871558 intron,5` UTR cbx -,CG18446 + chr2R_7_9870001 chr2R_9870001 RAL-805 514 chr2R 9945438 9945470 chr2R 9945633 9945666 BS 8 196 5.0 2.5 3.8 1.7 228 chr2R 9945438 intron Mef2 - chr2R 9945552 intron Mef2 - chr2R 9945666 intron Mef2 - chr2R_8_9945001 chr2R_9945001 RAL-805 515 chr2R 10001347 10001377 chr2R 10001424 10001455 14 76 3.0 3.5 3.2 3.3 108 chr2R 10001347 intron Pka-R2 - chr2R 10001401 intron Pka-R2 - chr2R 10001455 intron Pka-R2 - chr2R_14_10000001 chr2R_10000001 RAL-805 516 chr2R 10005559 10005568 chr2R 10005656 10005662 4 96 4.5 3.0 3.8 0.8 103 chr2R 10005559 intron Pka-R2 - chr2R 10005610 intron Pka-R2 - chr2R 10005662 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-805 517 chr2R 10005850 10005880 chr2R 10007015 10007042 1360 8 1164 2.5 4.0 3.2 1.9 1192 chr2R 10005850 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007042 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-805 518 chr2R 10047815 10047836 chr2R 10047898 10047919 4 83 1.0 4.5 2.8 1.1 104 chr2R 10047815 intron oys - chr2R 10047867 intron oys - chr2R 10047919 intron oys - chr2R_4_10045001 chr2R_10045001 RAL-805 519 chr2R 10132201 10132209 chr2R 10132281 10132289 4 80 1.5 0.5 1.0 2.0 88 chr2R 10132201 intron gem + chr2R 10132245 intron gem + chr2R 10132289 intron gem + chr2R_4_10130001 chr2R_10130001 RAL-805 520 chr2R 10140295 10140323 chr2R 10140402 10140431 15 108 5.0 0.0 2.5 4.3 136 chr2R 10140295 3` UTR,intron CR43467 -,Or46a + chr2R 10140363 3` UTR,exon CR43467 -,Or46a + chr2R 10140431 3` UTR,exon CR43467 -,Or46a + chr2R_15_10140001 chr2R_10140001 RAL-805 521 chr2R 10176127 10176144 chr2R 10176206 10176223 5 79 2.5 7.5 5.0 0.8 96 chr2R 10176127 intron KCNQ - chr2R 10176175 intron KCNQ - chr2R 10176223 intron KCNQ - chr2R_5_10175001 chr2R_10175001 RAL-805 522 chr2R 10176889 10176913 chr2R 10186056 10186080 roo 6 9167 1.5 1.0 1.2 2.7 9191 chr2R 10176889 intron KCNQ - chr2R 10181484 intron KCNQ - chr2R 10186080 intron KCNQ - chr2R_6_10180001 chr2R_10180001 RAL-805 523 chr2R 10203642 10203661 chr2R 10203727 10203746 5 85 4.0 2.0 3.0 1.2 104 chr2R 10203642 intergenic not near genes chr2R 10203694 intergenic not near genes chr2R 10203746 intergenic not near genes chr2R_5_10200001 chr2R_10200001 RAL-805 524 chr2R 10216196 10216221 chr2R 10216273 10216297 6 78 3.0 3.0 3.0 1.5 101 chr2R 10216196 intron,intron CG12912 -,Hr46 - chr2R 10216246 intron,intron CG12912 -,Hr46 - chr2R 10216297 intron,intron CG12912 -,Hr46 - chr2R_6_10215001 chr2R_10215001 RAL-805 525 chr2R 10313310 10313333 chr2R 10313404 10313424 7 93 0.5 0.0 0.2 5.8 114 chr2R 10313310 intergenic not near genes chr2R 10313367 intergenic not near genes chr2R 10313424 intergenic Ndg + chr2R_7_10310001 chr2R_10310001 RAL-805 526 chr2R 10318516 10318546 chr2R 10318602 10318632 16 86 4.0 1.5 2.8 4.2 116 chr2R 10318516 intron Ndg + chr2R 10318574 intron Ndg + chr2R 10318632 intron Ndg + chr2R_16_10315001 chr2R_10315001 RAL-805 527 chr2R 10352673 10352704 chr2R 10352750 10352780 17 76 1.0 1.5 1.2 7.7 107 chr2R 10352673 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352780 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_17_10350001 chr2R_10350001 RAL-805 528 chr2R 10368978 10369011 chr2R 10369066 10369098 13 88 1.0 3.5 2.2 4.1 120 chr2R 10368978 intron CG42732 - chr2R 10369038 intron CG42732 - chr2R 10369098 intron CG42732 - chr2R_13_10365001 chr2R_10365001 RAL-805 529 chr2R 10411821 10411833 chr2R 10411902 10411915 9 82 2.5 9.0 5.8 1.3 94 chr2R 10411821 intron CG42732 - chr2R 10411868 intron CG42732 - chr2R 10411915 intron CG42732 - chr2R_9_10410001 chr2R_10410001 RAL-805 530 chr2R 10429028 10429046 chr2R 10429103 10429121 4 76 2.5 3.5 3.0 1.0 93 chr2R 10429028 intergenic not near genes chr2R 10429074 intergenic not near genes chr2R 10429121 intergenic not near genes chr2R_4_10425001 chr2R_10425001 RAL-805 531 chr2R 10454095 10454124 chr2R 10454172 10454201 12 76 6.0 3.0 4.5 2.2 106 chr2R 10454095 intron,intron Galphao +,Cyp49a1 - chr2R 10454148 intron,intron Galphao +,Cyp49a1 - chr2R 10454201 intron,intron Galphao +,Cyp49a1 - chr2R_12_10450001 chr2R_10450001 RAL-805 532 chr2R 10469040 10469051 chr2R 10469156 10469167 8 116 3.0 3.0 3.0 2.0 127 chr2R 10469040 intron CG11777 + chr2R 10469104 intron CG11777 + chr2R 10469167 intron CG11777 + chr2R_8_10465001 chr2R_10465001 RAL-805 533 chr2R 10556368 10556382 chr2R 10556449 10556464 6 81 0.0 9.5 4.8 1.0 96 chr2R 10556368 intergenic not near genes chr2R 10556416 intergenic not near genes chr2R 10556464 intergenic not near genes chr2R_6_10555001 chr2R_10555001 RAL-805 534 chr2R 10562998 10563010 chr2R 10563072 10563088 4 77 2.0 0.0 1.0 2.0 90 chr2R 10562998 intron psq + chr2R 10563043 intron psq + chr2R 10563088 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-805 535 chr2R 10574633 10574647 chr2R 10574715 10574728 4 82 4.5 3.5 4.0 0.8 95 chr2R 10574633 intron psq + chr2R 10574680 intron psq + chr2R 10574728 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-805 536 chr2R 10644060 10644090 chr2R 10644138 10644168 9 78 1.0 1.5 1.2 4.1 108 chr2R 10644060 intron Git - chr2R 10644114 intron Git - chr2R 10644168 intron Git - chr2R_9_10640001 chr2R_10640001 RAL-805 537 chr2R 10761559 10761590 chr2R 10761713 10761744 9 154 0.5 2.0 1.2 4.1 185 chr2R 10761559 intron,5` UTR CG33144 -,CR43605 + chr2R 10761652 intron,5` UTR CG33144 -,CR43605 + chr2R 10761744 intron CG33144 - chr2R_9_10760001 chr2R_10760001 RAL-805 538 chr2R 10771001 10771015 chr2R 10771081 10771096 5 81 3.5 3.0 3.2 1.2 95 chr2R 10771001 intron CG33144 - chr2R 10771048 intron CG33144 - chr2R 10771096 intron CG33144 - chr2R_5_10770001 chr2R_10770001 RAL-805 539 chr2R 10827335 10827362 chr2R 10827421 10827450 11 85 1.5 4.0 2.8 2.9 115 chr2R 10827335 exon CG12325 + chr2R 10827392 3` UTR CG12325 + chr2R 10827450 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_11_10825001 chr2R_10825001 RAL-805 540 chr2R 10834242 10834251 chr2R 10834717 10834732 5 474 17.0 20.5 18.8 0.3 490 chr2R 10834242 intron CG12344 - chr2R 10834487 intron CG12344 - chr2R 10834732 intron CG12344 - chr2R_5_10830001 chr2R_10830001 RAL-805 541 chr2R 10871653 10871676 chr2R 10871727 10871758 8 80 0.0 6.0 3.0 2.0 105 chr2R 10871653 intron CG30015 - chr2R 10871706 intron CG30015 - chr2R 10871758 intron CG30015 - chr2R_8_10870001 chr2R_10870001 RAL-805 542 chr2R 10948025 10948062 chr2R 10955575 10955610 17.6 5 7550 0.5 3.5 2.0 1.7 7585 chr2R 10948025 intergenic not near genes chr2R 10951818 intergenic not near genes chr2R 10955610 intergenic not near genes chr2R_5_10950001 chr2R_10950001 RAL-805 543 chr2R 11005257 11005288 chr2R 11005893 11005923 13 636 20.0 18.5 19.2 0.6 666 chr2R 11005257 intron luna - chr2R 11005590 intron luna - chr2R 11005923 intron luna - chr2R_13_11005001 chr2R_11005001 RAL-805 544 chr2R 11009813 11009847 chr2R 11018987 11019021 roo 6 9174 2.0 3.0 2.5 1.7 9208 chr2R 11009813 intron luna - chr2R 11014417 intron luna - chr2R 11019021 intron luna - chr2R_6_11010001 chr2R_11010001 RAL-805 545 chr2R 11019878 11019909 chr2R 11024944 11024975 jockey 8 5065 2.5 3.5 3.0 2.0 5097 chr2R 11019878 intron luna - chr2R 11022426 intron luna - chr2R 11024975 intron luna - chr2R_8_11020001 chr2R_11020001 RAL-805 546 chr2R 11102864 11102889 chr2R 11102946 11102956 6 79 6.0 0.0 3.0 1.5 92 chr2R 11102864 intron luna - chr2R 11102910 intron luna - chr2R 11102956 intron luna - chr2R_6_11100001 chr2R_11100001 RAL-805 547 chr2R 11179270 11179289 chr2R 11179356 11179375 7 85 3.0 3.5 3.2 1.7 105 chr2R 11179270 intron shn + chr2R 11179322 intron shn + chr2R 11179375 intron shn + chr2R_7_11175001 chr2R_11175001 RAL-805 548 chr2R 11207822 11207838 chr2R 11208013 11208031 BS 6 193 5.0 2.0 3.5 1.3 209 chr2R 11207822 intron shn + chr2R 11207926 intron shn + chr2R 11208031 intron shn + chr2R_6_11205001 chr2R_11205001 RAL-805 549 chr2R 11254862 11254894 chr2R 11254950 11254982 10 87 4.0 2.0 3.0 2.5 120 chr2R 11254862 intergenic Cpr47Eb + chr2R 11254922 intergenic Cpr47Eb + chr2R 11254982 intergenic Cpr47Eb + chr2R_10_11250001 chr2R_11250001 RAL-805 550 chr2R 11276806 11276818 chr2R 11276974 11276986 6 168 4.5 5.0 4.8 1.0 180 chr2R 11276806 intergenic not near genes chr2R 11276896 intergenic not near genes chr2R 11276986 intergenic not near genes chr2R_6_11275001 chr2R_11275001 RAL-805 551 chr2R 11292973 11292995 chr2R 11293051 11293074 11 78 0.5 0.5 0.5 7.3 101 chr2R 11292973 exon,3` UTR dare -,CG30033 + chr2R 11293024 5` UTR,3` UTR dare -,CG30033 + chr2R 11293074 5` UTR,3` UTR dare -,CG30033 + chr2R_11_11290001 chr2R_11290001 RAL-805 552 chr2R 11297616 11297648 chr2R 11301937 11301969 flea 5 4321 5.5 2.0 3.8 1.0 4353 chr2R 11297616 intergenic CG42336 - chr2R 11299792 intergenic not near genes chr2R 11301969 5` UTR CG7741 + chr2R_5_11295001 chr2R_11295001 RAL-805 553 chr2R 11343583 11343593 chr2R 11343669 11343679 6 86 2.5 4.5 3.5 1.3 96 chr2R 11343583 intergenic not near genes chr2R 11343631 intergenic not near genes chr2R 11343679 intergenic not near genes chr2R_6_11340001 chr2R_11340001 RAL-805 554 chr2R 11415517 11415541 chr2R 11418665 11418686 opus 10 3147 4.0 3.0 3.5 2.2 3169 chr2R 11415517 intron Drip - chr2R 11417102 intron Drip - chr2R 11418686 intron Drip - chr2R_10_11415001 chr2R_11415001 RAL-805 555 chr2R 11472651 11472676 chr2R 11473848 11473869 pogo 7 1196 5.5 4.5 5.0 1.2 1218 chr2R 11472651 intergenic not near genes chr2R 11473260 intergenic not near genes chr2R 11473869 intergenic not near genes chr2R_7_11470001 chr2R_11470001 RAL-805 556 chr2R 11561966 11561975 chr2R 11562044 11562053 6 78 7.0 9.0 8.0 0.7 87 chr2R 11561966 intergenic not near genes chr2R 11562010 intergenic not near genes chr2R 11562053 intergenic not near genes chr2R_6_11560001 chr2R_11560001 RAL-805 557 chr2R 11724179 11724189 chr2R 11724262 11724271 5 83 0.0 2.0 1.0 2.5 92 chr2R 11724179 intron pyr + chr2R 11724225 intron pyr + chr2R 11724271 intron pyr + chr2R_5_11720001 chr2R_11720001 RAL-805 558 chr2R 11728271 11728296 chr2R 11728347 11728372 10 76 3.0 6.0 4.5 1.8 101 chr2R 11728271 intergenic not near genes chr2R 11728322 intergenic not near genes chr2R 11728372 intergenic not near genes chr2R_10_11725001 chr2R_11725001 RAL-805 559 chr2R 11765696 11765708 chr2R 11765758 11765783 10 73 2.5 3.0 2.8 2.6 87 chr2R 11765696 intron ths + chr2R 11765740 intron ths + chr2R 11765783 intron ths + chr2R_10_11765001 chr2R_11765001 RAL-805 560 chr2R 11787445 11787464 chr2R 11787531 11787550 5 86 6.0 2.0 4.0 1.0 105 chr2R 11787445 intron ths + chr2R 11787498 intron ths + chr2R 11787550 intron ths + chr2R_5_11785001 chr2R_11785001 RAL-805 561 chr2R 11822990 11823005 chr2R 11823054 11823081 8 71 0.0 1.5 0.8 4.4 91 chr2R 11822990 intergenic not near genes chr2R 11823036 intergenic not near genes chr2R 11823081 intergenic not near genes chr2R_8_11820001 chr2R_11820001 RAL-805 562 chr2R 8518781 8518788 chr2R 12066176 12066195 6 3547398 10.0 10.5 10.2 0.5 3547414 chr2R 8518781 intron mtt - chr2R 10292488 intron CAP + chr2R 12066195 intron CG8888 - chr2R_6_10290001 chr2R_10290001 RAL-805 563 chr2R 12146488 12146498 chr2R 12147593 12147619 4 1115 11.5 15.5 13.5 0.3 1131 chr2R 12146488 intron,3` UTR Hen1 +,CG8878 - chr2R 12147054 intron,exon Hen1 +,CG8878 - chr2R 12147619 intron,exon Hen1 +,CG8878 - chr2R_4_12145001 chr2R_12145001 RAL-805 564 chr2R 12145909 12145943 chr2R 12148608 12148636 5 2694 25.0 28.0 26.5 0.2 2727 chr2R 12145909 exon Hen1 + chr2R 12147272 intron,intron Hen1 +,CG8878 - chr2R 12148636 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-805 565 chr2R 12186001 12186035 chr2R 12186096 12186130 9 95 2.0 3.0 2.5 2.6 129 chr2R 12186001 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186130 intron Cyp6g1 + chr2R_9_12185001 chr2R_12185001 RAL-805 566 chr2R 12187471 12187508 chr2R 12190087 12190124 64 2620 119.0 80.0 99.5 0.6 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_64_12185001 chr2R_12185001 RAL-805 567 chr2R 12363380 12363413 chr2R 12363812 12363845 10 432 2.5 4.5 3.5 2.2 465 chr2R 12363380 intergenic CG30043 + chr2R 12363612 intergenic CG30043 + chr2R 12363845 intergenic not near genes chr2R_10_12360001 chr2R_12360001 RAL-805 568 chr2R 12377499 12377523 chr2R 12377621 12377645 9 122 3.0 2.5 2.8 2.4 146 chr2R 12377499 intergenic Cpr49Aa + chr2R 12377572 intergenic Cpr49Aa + chr2R 12377645 intergenic Cpr49Aa + chr2R_9_12375001 chr2R_12375001 RAL-805 569 chr2R 12501694 12501727 chr2R 12503856 12503889 Rt1c 4 2158 1.5 3.5 2.5 1.1 2195 chr2R 12501694 intron fdl - chr2R 12502792 intron fdl - chr2R 12503889 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-805 570 chr2R 12531585 12531613 chr2R 12531668 12531696 12 83 1.5 6.0 3.8 2.5 111 chr2R 12531585 intron fra + chr2R 12531640 intron fra + chr2R 12531696 intron fra + chr2R_12_12530001 chr2R_12530001 RAL-805 571 chr2R 12603699 12603734 chr2R 12603787 12603817 6 87 2.0 3.0 2.5 1.7 118 chr2R 12603699 intron Amph + chr2R 12603758 intron Amph + chr2R 12603817 intron Amph + chr2R_6_12600001 chr2R_12600001 RAL-805 572 chr2R 12726324 12726353 chr2R 12726414 12726445 10 91 2.0 2.0 2.0 3.3 121 chr2R 12726324 intron CG42663 + chr2R 12726384 intron CG42663 + chr2R 12726445 intron CG42663 + chr2R_10_12725001 chr2R_12725001 RAL-805 573 chr2R 12771323 12771328 chr2R 12771431 12771437 4 109 3.5 0.0 1.8 1.4 114 chr2R 12771323 intergenic not near genes chr2R 12771380 intergenic not near genes chr2R 12771437 intergenic not near genes chr2R_4_12770001 chr2R_12770001 RAL-805 574 chr2R 12819453 12819478 chr2R 12824522 12824546 jockey 8 5067 3.0 3.0 3.0 2.0 5093 chr2R 12819453 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824546 intergenic not near genes chr2R_8_12820001 chr2R_12820001 RAL-805 575 chr2R 12892341 12892354 chr2R 12892412 12892430 8 74 5.5 3.5 4.5 1.5 89 chr2R 12892341 intron vg + chr2R 12892386 intron vg + chr2R 12892430 intron vg + chr2R_8_12890001 chr2R_12890001 RAL-805 576 chr2R 12951671 12951692 chr2R 12951752 12951773 6 79 1.5 4.5 3.0 1.5 102 chr2R 12951671 intron,intron CG44251 -,CG44250 - chr2R 12951722 intron,intron CG44251 -,CG44250 - chr2R 12951773 intron,intron CG44251 -,CG44250 - chr2R_6_12950001 chr2R_12950001 RAL-805 577 chr2R 13013995 13014020 chr2R 13014083 13014108 6 88 1.5 2.5 2.0 2.0 113 chr2R 13013995 intergenic not near genes chr2R 13014052 intergenic not near genes chr2R 13014108 intergenic not near genes chr2R_6_13010001 chr2R_13010001 RAL-805 578 chr2R 13061349 13061381 chr2R 13061430 13061461 13 81 1.0 2.5 1.8 4.6 112 chr2R 13061349 intron Drl-2 - chr2R 13061405 intron Drl-2 - chr2R 13061461 intron Drl-2 - chr2R_13_13060001 chr2R_13060001 RAL-805 579 chr2R 13078395 13078416 chr2R 13078528 13078549 5 133 1.5 3.0 2.2 1.6 154 chr2R 13078395 intron Drl-2 - chr2R 13078472 intron Drl-2 - chr2R 13078549 intron Drl-2 - chr2R_5_13075001 chr2R_13075001 RAL-805 580 chr2R 13089757 13089781 chr2R 13089863 13089891 11 106 1.5 3.0 2.2 3.4 134 chr2R 13089757 intergenic not near genes chr2R 13089824 intergenic not near genes chr2R 13089891 intergenic not near genes chr2R_11_13085001 chr2R_13085001 RAL-805 581 chr2R 13129191 13129218 chr2R 13129269 13129296 9 76 2.5 2.0 2.2 2.8 105 chr2R 13129191 intergenic CG3955 -,CG13326 - chr2R 13129244 intergenic CG3955 -,CG13326 - chr2R 13129296 intergenic CG13326 -,CG3955 - chr2R_9_13125001 chr2R_13125001 RAL-805 582 chr2R 13136838 13136861 chr2R 13141636 13141659 Doc 13 4798 6.0 1.0 3.5 2.9 4821 chr2R 13136838 exon Cap-G + chr2R 13139248 intron Cap-G + chr2R 13141659 intron Cap-G + chr2R_13_13135001 chr2R_13135001 RAL-805 583 chr2R 13167428 13167462 chr2R 13167522 13167556 9 94 1.0 0.0 0.5 6.0 128 chr2R 13167428 intron GLaz - chr2R 13167492 intron GLaz - chr2R 13167556 intron GLaz - chr2R_9_13165001 chr2R_13165001 RAL-805 584 chr2R 13218308 13218319 chr2R 13218391 13218402 6 83 4.0 0.0 2.0 2.0 94 chr2R 13218308 intron CG4630 - chr2R 13218355 intron CG4630 - chr2R 13218402 intron CG4630 - chr2R_6_13215001 chr2R_13215001 RAL-805 585 chr2R 13305499 13305511 chr2R 13305581 13305592 8 81 4.5 4.5 4.5 1.5 93 chr2R 13305499 intergenic not near genes chr2R 13305546 intergenic not near genes chr2R 13305592 intergenic not near genes chr2R_8_13305001 chr2R_13305001 RAL-805 586 chr2R 13431492 13431510 chr2R 13431571 13431589 5 79 4.5 1.5 3.0 1.2 97 chr2R 13431492 intron CG42321 - chr2R 13431540 intron CG42321 - chr2R 13431589 intron CG42321 - chr2R_5_13430001 chr2R_13430001 RAL-805 587 chr2R 13438860 13438893 chr2R 13440178 13440211 24 1319 28.5 46.0 37.2 0.6 1351 chr2R 13438860 5` UTR CG42321 - chr2R 13439536 3` UTR cnn - chr2R 13440211 exon cnn - chr2R_24_13435001 chr2R_13435001 RAL-805 588 chr2R 13464025 13464046 chr2R 13464340 13464364 8 316 7.5 4.0 5.8 1.2 339 chr2R 13464025 intron arr - chr2R 13464194 intron arr - chr2R 13464364 intron arr - chr2R_8_13460001 chr2R_13460001 RAL-805 589 chr2R 13471612 13471634 chr2R 13471696 13471718 8 84 0.0 3.0 1.5 3.2 106 chr2R 13471612 intron arr - chr2R 13471665 intron arr - chr2R 13471718 intron arr - chr2R_8_13470001 chr2R_13470001 RAL-805 590 chr2R 13535493 13535526 chr2R 13535575 13535608 17 81 6.5 4.5 5.5 2.6 115 chr2R 13535493 intergenic not near genes chr2R 13535550 intergenic not near genes chr2R 13535608 intergenic not near genes chr2R_17_13535001 chr2R_13535001 RAL-805 591 chr2R 13539544 13539561 chr2R 13539628 13539644 7 82 5.5 4.5 5.0 1.2 100 chr2R 13539544 intron CG6145 - chr2R 13539594 intron CG6145 - chr2R 13539644 intron CG6145 - chr2R_7_13535001 chr2R_13535001 RAL-805 592 chr2R 13580515 13580531 chr2R 13580853 13580881 jockey 6 347 0.5 4.5 2.5 1.7 366 chr2R 13580515 3` UTR CG6191 - chr2R 13580698 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580881 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_6_13580001 chr2R_13580001 RAL-805 593 chr2R 13623192 13623217 chr2R 13623298 13623319 5 105 1.0 2.5 1.8 1.8 127 chr2R 13623192 5` UTR fas + chr2R 13623256 5` UTR fas + chr2R 13623319 5` UTR fas + chr2R_5_13620001 chr2R_13620001 RAL-805 594 chr2R 13728144 13728165 chr2R 13735801 13735822 opus 5 7657 1.0 1.5 1.2 2.3 7678 chr2R 13728144 intron fas + chr2R 13731983 intron fas + chr2R 13735822 intron fas + chr2R_5_13730001 chr2R_13730001 RAL-805 595 chr2R 13770503 13770527 chr2R 13770593 13770617 7 90 0.0 0.5 0.2 5.8 114 chr2R 13770503 intron Cpr50Ca + chr2R 13770560 intron Cpr50Ca + chr2R 13770617 intron Cpr50Ca + chr2R_7_13770001 chr2R_13770001 RAL-805 596 chr2R 13790326 13790341 chr2R 13790402 13790417 5 76 3.5 0.0 1.8 1.8 91 chr2R 13790326 intergenic not near genes chr2R 13790372 intergenic not near genes chr2R 13790417 intergenic not near genes chr2R_5_13790001 chr2R_13790001 RAL-805 597 chr2R 13827542 13827573 chr2R 13827715 13827746 5 173 0.5 6.0 3.2 1.2 204 chr2R 13827542 intron CG6329 + chr2R 13827644 intron CG6329 + chr2R 13827746 intron CG6329 + chr2R_5_13825001 chr2R_13825001 RAL-805 598 chr2R 13905606 13905637 chr2R 13907588 13907601 Rt1a 11 1979 1.5 1.5 1.5 4.4 1995 chr2R 13905606 intron shot - chr2R 13906604 intron shot - chr2R 13907601 intron shot - chr2R_11_13905001 chr2R_13905001 RAL-805 599 chr2R 13925868 13925893 chr2R 13926022 13926047 8 154 4.5 5.0 4.8 1.4 179 chr2R 13925868 intron shot - chr2R 13925958 intron shot - chr2R 13926047 intron shot - chr2R_8_13925001 chr2R_13925001 RAL-805 600 chr2R 14018159 14018187 chr2R 14018243 14018271 6 84 1.5 1.0 1.2 2.7 112 chr2R 14018159 intron mam + chr2R 14018215 intron mam + chr2R 14018271 intron mam + chr2R_6_14015001 chr2R_14015001 RAL-805 601 chr2R 14050852 14050861 chr2R 14050940 14050950 4 89 1.0 7.0 4.0 0.8 98 chr2R 14050852 intron mam + chr2R 14050901 intron mam + chr2R 14050950 intron mam + chr2R_4_14050001 chr2R_14050001 RAL-805 602 chr2R 14093436 14093442 chr2R 14109587 14109593 5 16151 5.0 3.0 4.0 1.0 16157 chr2R 14093436 intron Prosap - chr2R 14101514 intron Prosap - chr2R 14109593 intron Prosap - chr2R_5_14100001 chr2R_14100001 RAL-805 603 chr2R 14249837 14249868 chr2R 14250338 14250368 14 500 2.0 5.5 3.8 2.9 531 chr2R 14249837 exon Mdr50 + chr2R 14250102 exon Mdr50 + chr2R 14250368 exon Mdr50 + chr2R_14_14250001 chr2R_14250001 RAL-805 604 chr2R 14266765 14266790 chr2R 14266839 14266846 10 72 4.5 4.5 4.5 1.8 81 chr2R 14266765 intron CG8547 - chr2R 14266806 intron CG8547 - chr2R 14266846 intron CG8547 - chr2R_10_14265001 chr2R_14265001 RAL-805 605 chr2R 14405558 14405583 chr2R 14405895 14405913 8 335 3.0 5.0 4.0 1.6 355 chr2R 14405558 intergenic not near genes chr2R 14405736 intergenic not near genes chr2R 14405913 intergenic not near genes chr2R_8_14405001 chr2R_14405001 RAL-805 606 chr2R 14427230 14427255 chr2R 14427309 14427334 6 79 2.0 1.0 1.5 2.4 104 chr2R 14427230 intergenic phyl - chr2R 14427282 intergenic phyl - chr2R 14427334 intergenic phyl - chr2R_6_14425001 chr2R_14425001 RAL-805 607 chr2R 14460698 14460731 chr2R 14460782 14460813 6 83 2.5 4.0 3.2 1.4 115 chr2R 14460698 intron Oaz + chr2R 14460756 intron Oaz + chr2R 14460813 intron Oaz + chr2R_6_14460001 chr2R_14460001 RAL-805 608 chr2R 14488968 14488999 chr2R 14489458 14489488 9 490 1.0 0.0 0.5 6.0 520 chr2R 14488968 intron L + chr2R 14489228 intron L + chr2R 14489488 intron L + chr2R_9_14485001 chr2R_14485001 RAL-805 609 chr2R 14497394 14497420 chr2R 14498560 14498586 1360 5 1165 1.5 3.5 2.5 1.4 1192 chr2R 14497394 3` UTR Cpsf160 - chr2R 14497990 intron Cpsf160 - chr2R 14498586 3` UTR Cpsf160 - chr2R_5_14495001 chr2R_14495001 RAL-805 610 chr2R 14530363 14530375 chr2R 14530452 14530464 7 89 8.0 2.0 5.0 1.2 101 chr2R 14530363 intron ttv + chr2R 14530414 intron ttv + chr2R 14530464 intron ttv + chr2R_7_14530001 chr2R_14530001 RAL-805 611 chr2R 14530752 14530775 chr2R 14530833 14530857 11 81 2.5 3.0 2.8 2.9 105 chr2R 14530752 intron ttv + chr2R 14530804 intron ttv + chr2R 14530857 intron ttv + chr2R_11_14530001 chr2R_14530001 RAL-805 612 chr2R 14565559 14565587 chr2R 14565636 14565663 9 77 4.0 4.0 4.0 1.8 104 chr2R 14565559 intron ttv + chr2R 14565611 intron ttv + chr2R 14565663 intron ttv + chr2R_9_14565001 chr2R_14565001 RAL-805 613 chr2R 14566447 14566477 chr2R 14566534 14566564 6 87 1.5 2.0 1.8 2.1 117 chr2R 14566447 intron ttv + chr2R 14566506 intron ttv + chr2R 14566564 intron ttv + chr2R_6_14565001 chr2R_14565001 RAL-805 614 chr2R 14623878 14623893 chr2R 14623974 14623989 4 96 0.0 2.5 1.2 1.8 111 chr2R 14623878 intron Uhg5 + chr2R 14623934 5` UTR Uhg5 + chr2R 14623989 intron Uhg5 + chr2R_4_14620001 chr2R_14620001 RAL-805 615 chr2R 14698061 14698080 chr2R 14698164 14698183 5 102 1.5 1.0 1.2 2.3 122 chr2R 14698061 intron mspo - chr2R 14698122 intron mspo - chr2R 14698183 intron mspo - chr2R_5_14695001 chr2R_14695001 RAL-805 616 chr2R 14718122 14718144 chr2R 14718202 14718229 14 80 4.0 1.0 2.5 4.0 107 chr2R 14718122 intergenic not near genes chr2R 14718176 intergenic not near genes chr2R 14718229 intergenic not near genes chr2R_14_14715001 chr2R_14715001 RAL-805 617 chr2R 14799869 14799891 chr2R 14799945 14799967 5 76 1.5 2.0 1.8 1.8 98 chr2R 14799869 intron kn - chr2R 14799918 intron kn - chr2R 14799967 intron kn - chr2R_5_14795001 chr2R_14795001 RAL-805 618 chr2R 14850077 14850081 chr2R 14850178 14850187 4 104 26.5 24.0 25.2 0.2 110 chr2R 14850077 exon SMC2 - chr2R 14850132 intron SMC2 - chr2R 14850187 exon SMC2 - chr2R_4_14850001 chr2R_14850001 RAL-805 619 chr2R 14855030 14855063 chr2R 14855122 14855139 12 85 3.0 1.0 2.0 4.0 109 chr2R 14855030 5` UTR Ciao1 - chr2R 14855084 intergenic Ciao1 -,HPS1 + chr2R 14855139 intergenic Ciao1 -,HPS1 + chr2R_12_14855001 chr2R_14855001 RAL-805 620 chr2R 14873693 14873722 chr2R 14875211 14875240 7 1518 1.0 1.5 1.2 3.2 1547 chr2R 14873693 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874466 exon Cyp6a17 + chr2R 14875240 exon Cyp6a17 + chr2R_7_14870001 chr2R_14870001 RAL-805 621 chr2R 14889212 14889233 chr2R 14897819 14897841 Max-element 5 8608 4.0 0.0 2.0 1.7 8629 chr2R 14889212 intergenic Cyp6a8 - chr2R 14893526 intergenic not near genes chr2R 14897841 intergenic not near genes chr2R_5_14890001 chr2R_14890001 RAL-805 622 chr2R 14911705 14911727 chr2R 14911828 14911850 6 123 4.5 2.5 3.5 1.3 145 chr2R 14911705 intron CG10249 - chr2R 14911778 intron CG10249 - chr2R 14911850 intron CG10249 - chr2R_6_14910001 chr2R_14910001 RAL-805 623 chr2R 14919045 14919070 chr2R 14919125 14919150 5 79 3.0 0.0 1.5 2.0 105 chr2R 14919045 intron CG10249 - chr2R 14919098 intron CG10249 - chr2R 14919150 intron CG10249 - chr2R_5_14915001 chr2R_14915001 RAL-805 624 chr2R 14922153 14922174 chr2R 14922217 14922250 12 74 4.0 3.5 3.8 2.5 97 chr2R 14922153 intron CG10249 - chr2R 14922202 intron CG10249 - chr2R 14922250 intron CG10249 - chr2R_12_14920001 chr2R_14920001 RAL-805 625 chr2R 14925212 14925234 chr2R 14925326 14925349 7 115 1.0 1.5 1.2 3.2 137 chr2R 14925212 intron CG10249 - chr2R 14925280 intron CG10249 - chr2R 14925349 intron CG10249 - chr2R_7_14925001 chr2R_14925001 RAL-805 626 chr2R 15015459 15015474 chr2R 15022883 15022895 mdg1 5 7423 2.5 0.0 1.2 2.3 7436 chr2R 15015459 intron hbs + chr2R 15019177 intron hbs + chr2R 15022895 intron hbs + chr2R_5_15015001 chr2R_15015001 RAL-805 627 chr2R 15084978 15085003 chr2R 15092027 15092052 297 6 7049 4.0 2.0 3.0 1.5 7074 chr2R 15084978 intergenic not near genes chr2R 15088515 intergenic not near genes chr2R 15092052 5` UTR CR44457 + chr2R_6_15085001 chr2R_15085001 RAL-805 628 chr2R 15094890 15094915 chr2R 15094967 15094992 8 77 1.5 1.5 1.5 3.2 102 chr2R 15094890 intergenic not near genes chr2R 15094941 intergenic not near genes chr2R 15094992 intergenic not near genes chr2R_8_15090001 chr2R_15090001 RAL-805 629 chr2R 15119326 15119344 chr2R 15127801 15127822 Tirant 8 8479 3.0 7.0 5.0 1.3 8496 chr2R 15119326 intron chn + chr2R 15123574 intron chn + chr2R 15127822 intron chn + chr2R_8_15120001 chr2R_15120001 RAL-805 630 chr2R 15133478 15133504 chr2R 15133557 15133582 6 79 7.0 5.5 6.2 0.8 104 chr2R 15133478 intron chn + chr2R 15133530 intron chn + chr2R 15133582 intron chn + chr2R_6_15130001 chr2R_15130001 RAL-805 631 chr2R 15137969 15138004 chr2R 15138049 15138086 8 80 1.0 0.0 0.5 5.3 117 chr2R 15137969 intron chn + chr2R 15138028 intron chn + chr2R 15138086 intron chn + chr2R_8_15135001 chr2R_15135001 RAL-805 632 chr2R 15187886 15187919 chr2R 15187963 15187997 15 77 3.5 3.0 3.2 3.6 111 chr2R 15187886 intron igl + chr2R 15187942 intron igl + chr2R 15187997 intron igl + chr2R_15_15185001 chr2R_15185001 RAL-805 633 chr2R 15191651 15191681 chr2R 15191727 15191757 12 75 4.5 1.5 3.0 3.0 106 chr2R 15191651 intergenic not near genes chr2R 15191704 intergenic not near genes chr2R 15191757 intergenic not near genes chr2R_12_15190001 chr2R_15190001 RAL-805 634 chr2R 15252120 15252145 chr2R 15252196 15252206 9 72 1.5 0.0 0.8 5.0 86 chr2R 15252120 intron scb + chr2R 15252163 intron scb + chr2R 15252206 intron scb + chr2R_9_15250001 chr2R_15250001 RAL-805 635 chr2R 15296159 15296169 chr2R 15296242 15296252 4 83 4.0 3.0 3.5 0.9 93 chr2R 15296159 intron Trpm - chr2R 15296206 intron Trpm - chr2R 15296252 intron Trpm - chr2R_4_15295001 chr2R_15295001 RAL-805 636 chr2R 15336292 15336314 chr2R 15336364 15336387 6 75 2.0 1.5 1.8 2.1 95 chr2R 15336292 intron Hr51 + chr2R 15336340 intron Hr51 + chr2R 15336387 intron Hr51 + chr2R_6_15335001 chr2R_15335001 RAL-805 637 chr2R 15375350 15375360 chr2R 15376167 15376175 4 816 0.0 5.5 2.8 1.1 825 chr2R 15375350 intergenic not near genes chr2R 15375762 intergenic not near genes chr2R 15376175 intergenic dup - chr2R_4_15375001 chr2R_15375001 RAL-805 638 chr2R 15451315 15451340 chr2R 15451896 15451922 5 578 1.0 3.0 2.0 1.7 607 chr2R 15451315 intron CG43729 + chr2R 15451618 intron CG43729 + chr2R 15451922 intron CG43729 + chr2R_5_15450001 chr2R_15450001 RAL-805 639 chr2R 15472054 15472064 chr2R 15472138 15472148 5 84 0.0 1.5 0.8 2.8 94 chr2R 15472054 intergenic CG8180 -,CG43729 + chr2R 15472101 intergenic CG8180 -,CG43729 + chr2R 15472148 intergenic CG8180 -,CG43729 + chr2R_5_15470001 chr2R_15470001 RAL-805 640 chr2R 15645678 15645704 chr2R 15645773 15645782 4 90 2.0 0.0 1.0 2.0 104 chr2R 15645678 intron CG42524 + chr2R 15645730 intron CG42524 + chr2R 15645782 intron CG42524 + chr2R_4_15645001 chr2R_15645001 RAL-805 641 chr2R 15685363 15685387 chr2R 15685466 15685485 4 102 4.5 2.0 3.2 1.0 122 chr2R 15685363 intron,exon Ranbp11 +,CG30082 - chr2R 15685424 intron,intron Ranbp11 +,CG30082 - chr2R 15685485 intron,intron Ranbp11 +,CG30082 - chr2R_4_15685001 chr2R_15685001 RAL-805 642 chr2R 15794868 15794900 chr2R 15794958 15794990 4 90 0.5 0.0 0.2 3.3 122 chr2R 15794868 intron,5` UTR Zasp52 -,tun + chr2R 15794929 intron,5` UTR Zasp52 -,tun + chr2R 15794990 intron,intron Zasp52 -,tun + chr2R_4_15790001 chr2R_15790001 RAL-805 643 chr2R 15840840 15840860 chr2R 15840919 15840939 10 78 2.5 1.0 1.8 3.6 99 chr2R 15840840 intron tun + chr2R 15840890 intron tun + chr2R 15840939 intron tun + chr2R_10_15840001 chr2R_15840001 RAL-805 644 chr2R 15887207 15887217 chr2R 15887313 15887323 5 106 2.5 4.5 3.5 1.1 116 chr2R 15887207 intron sli - chr2R 15887265 intron sli - chr2R 15887323 intron sli - chr2R_5_15885001 chr2R_15885001 RAL-805 645 chr2R 15911219 15911239 chr2R 15911300 15911320 9 81 2.0 1.5 1.8 3.2 101 chr2R 15911219 intron sli - chr2R 15911270 intron sli - chr2R 15911320 intron sli - chr2R_9_15910001 chr2R_15910001 RAL-805 646 chr2R 16489276 16489302 chr2R 16489360 16489385 7 84 2.5 5.0 3.8 1.5 109 chr2R 16489276 intergenic CG33459 + chr2R 16489330 intergenic CG33459 + chr2R 16489385 intergenic CG33459 + chr2R_7_16485001 chr2R_16485001 RAL-805 647 chr2R 16496343 16496349 chr2R 16496412 16496419 5 74 7.5 0.5 4.0 1.0 76 chr2R 16496343 intergenic not near genes chr2R 16496381 intergenic not near genes chr2R 16496419 intergenic CG7813 - chr2R_5_16495001 chr2R_16495001 RAL-805 648 chr2R 16518044 16518066 chr2R 16518120 16518142 8 76 2.0 2.0 2.0 2.7 98 chr2R 16518044 intron Sema-2a + chr2R 16518093 intron Sema-2a + chr2R 16518142 intron Sema-2a + chr2R_8_16515001 chr2R_16515001 RAL-805 649 chr2R 16539637 16539667 chr2R 16544846 16544876 copia 5 5209 1.5 1.0 1.2 2.3 5239 chr2R 16539637 intergenic not near genes chr2R 16542256 intergenic not near genes chr2R 16544876 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-805 650 chr2R 16571877 16571903 chr2R 16571972 16571998 6 95 2.5 3.0 2.8 1.6 121 chr2R 16571877 intergenic CG4927 + chr2R 16571938 intergenic CG4927 + chr2R 16571998 intergenic CG4927 + chr2R_6_16570001 chr2R_16570001 RAL-805 651 chr2R 16601519 16601550 chr2R 16601630 16601661 11 110 3.5 6.5 5.0 1.8 142 chr2R 16601519 intron CG8303 - chr2R 16601590 intron CG8303 - chr2R 16601661 intron CG8303 - chr2R_11_16600001 chr2R_16600001 RAL-805 652 chr2R 16671828 16671841 chr2R 16671904 16671909 5 74 1.5 1.0 1.2 2.3 81 chr2R 16671828 3` UTR CG34457 + chr2R 16671868 intergenic CG34457 +,CG34458 + chr2R 16671909 intergenic CG34457 +,CG34458 + chr2R_5_16670001 chr2R_16670001 RAL-805 653 chr2R 16682082 16682108 chr2R 16682263 16682289 8 181 2.5 1.0 1.8 2.9 207 chr2R 16682082 intron CG30463 - chr2R 16682186 intron CG30463 - chr2R 16682289 intron CG30463 - chr2R_8_16680001 chr2R_16680001 RAL-805 654 chr2R 16918232 16918260 chr2R 16918309 16918337 13 77 2.5 4.0 3.2 3.1 105 chr2R 16918232 intergenic not near genes chr2R 16918284 intergenic not near genes chr2R 16918337 intergenic not near genes chr2R_13_16915001 chr2R_16915001 RAL-805 655 chr2R 16970810 16970842 chr2R 16970888 16970919 15 78 2.5 4.5 3.5 3.3 109 chr2R 16970810 5` UTR CR44377 + chr2R 16970864 5` UTR CR44377 + chr2R 16970919 5` UTR CR44377 + chr2R_15_16970001 chr2R_16970001 RAL-805 656 chr2R 16972180 16972212 chr2R 16972259 16972290 5 78 2.0 0.5 1.2 2.3 110 chr2R 16972180 intergenic CR44377 + chr2R 16972235 intergenic not near genes chr2R 16972290 intergenic not near genes chr2R_5_16970001 chr2R_16970001 RAL-805 657 chr2R 17079061 17079089 chr2R 17079143 17079170 5 82 1.5 3.0 2.2 1.6 109 chr2R 17079061 intron CG30460 - chr2R 17079116 intron CG30460 - chr2R 17079170 intron CG30460 - chr2R_5_17075001 chr2R_17075001 RAL-805 658 chr2R 17098656 17098664 chr2R 17098741 17098753 6 88 4.5 5.0 4.8 1.0 97 chr2R 17098656 intergenic GstS1 - chr2R 17098704 intergenic GstS1 - chr2R 17098753 intergenic GstS1 - chr2R_6_17095001 chr2R_17095001 RAL-805 659 chr2R 17147242 17147265 chr2R 17152273 17152296 jockey 13 5031 6.0 4.5 5.2 2.1 5054 chr2R 17147242 intergenic not near genes chr2R 17149769 intergenic not near genes chr2R 17152296 intergenic not near genes chr2R_13_17145001 chr2R_17145001 RAL-805 660 chr2R 17210233 17210256 chr2R 17211068 17211096 10 839 7.0 1.5 4.2 1.9 863 chr2R 17210233 intergenic not near genes chr2R 17210664 intergenic not near genes chr2R 17211096 intergenic not near genes chr2R_10_17210001 chr2R_17210001 RAL-805 661 chr2R 17236506 17236537 chr2R 17241710 17241739 copia 12 5203 4.0 2.0 3.0 3.0 5233 chr2R 17236506 intron mbl + chr2R 17239122 intron mbl + chr2R 17241739 intron mbl + chr2R_12_17235001 chr2R_17235001 RAL-805 662 chr2R 17459005 17459035 chr2R 17459090 17459120 9 85 1.0 3.0 2.0 3.0 115 chr2R 17459005 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459120 intron CG14478 + chr2R_9_17455001 chr2R_17455001 RAL-805 663 chr2R 17485918 17485947 chr2R 17490687 17490696 F-element 6 4766 0.5 1.5 1.0 3.0 4778 chr2R 17485918 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488307 intron NT5E-2 + chr2R 17490696 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 RAL-805 664 chr2R 17627755 17627780 chr2R 17628082 17628107 9 327 2.0 5.0 3.5 2.0 352 chr2R 17627755 intron CG10936 - chr2R 17627931 intron CG10936 - chr2R 17628107 intron CG10936 - chr2R_9_17625001 chr2R_17625001 RAL-805 665 chr2R 17655216 17655226 chr2R 17655293 17655298 7 75 2.5 4.5 3.5 1.6 82 chr2R 17655216 intron CCHa1-R - chr2R 17655257 intron CCHa1-R - chr2R 17655298 intron CCHa1-R - chr2R_7_17655001 chr2R_17655001 RAL-805 666 chr2R 17655227 17655234 chr2R 17655281 17655293 6 64 1.0 2.5 1.8 2.1 66 chr2R 17655227 intron CCHa1-R - chr2R 17655260 intron CCHa1-R - chr2R 17655293 intron CCHa1-R - chr2R_6_17655001 chr2R_17655001 RAL-805 667 chr2R 17784026 17784049 chr2R 17784267 17784290 pogo 10 240 7.5 4.5 6.0 1.4 264 chr2R 17784026 intergenic mir-31a - chr2R 17784158 intergenic mir-31a - chr2R 17784290 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-805 668 chr2R 17918169 17918194 chr2R 17918246 17918271 5 77 2.5 2.5 2.5 1.4 102 chr2R 17918169 intron Elk + chr2R 17918220 intron Elk + chr2R 17918271 intron Elk + chr2R_5_17915001 chr2R_17915001 RAL-805 669 chr2R 18045671 18045692 chr2R 18046022 18046044 jockey 5 352 2.0 1.0 1.5 2.0 373 chr2R 18045671 intergenic not near genes chr2R 18045858 intergenic not near genes chr2R 18046044 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 RAL-805 670 chr2R 18308287 18308319 chr2R 18308393 18308408 11 104 5.5 2.5 4.0 2.2 121 chr2R 18308287 intron sbb - chr2R 18308348 intron sbb - chr2R 18308408 intron sbb - chr2R_11_18305001 chr2R_18305001 RAL-805 671 chr2R 18358386 18358424 chr2R 18372597 18372635 roo 15 14212 1.5 0.0 0.8 8.3 14249 chr2R 18358386 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372635 intergenic not near genes chr2R_15_18365001 chr2R_18365001 RAL-805 672 chr2R 18513312 18513341 chr2R 18513394 18513423 8 82 2.5 2.0 2.2 2.5 111 chr2R 18513312 intergenic not near genes chr2R 18513368 intergenic not near genes chr2R 18513423 intergenic not near genes chr2R_8_18510001 chr2R_18510001 RAL-805 673 chr2R 18526592 18526623 chr2R 18526674 18526705 19 81 5.5 4.0 4.8 3.3 113 chr2R 18526592 intergenic CG43066 + chr2R 18526648 intergenic CG43066 + chr2R 18526705 intergenic CG43066 + chr2R_19_18525001 chr2R_18525001 RAL-805 674 chr2R 18550577 18550609 chr2R 18550666 18550696 4 88 2.5 1.0 1.8 1.4 119 chr2R 18550577 intergenic not near genes chr2R 18550636 intergenic not near genes chr2R 18550696 intergenic not near genes chr2R_4_18550001 chr2R_18550001 RAL-805 675 chr2R 18575795 18575827 chr2R 18581983 18582012 3S18 7 6187 4.5 2.0 3.2 1.7 6217 chr2R 18575795 intron GEFmeso - chr2R 18578904 intron GEFmeso - chr2R 18582012 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-805 676 chr2R 18590868 18590898 chr2R 18600019 18600050 roo 6 9152 2.0 3.5 2.8 1.6 9182 chr2R 18590868 intron GEFmeso - chr2R 18595459 intron GEFmeso - chr2R 18600050 intron GEFmeso - chr2R_6_18595001 chr2R_18595001 RAL-805 677 chr2R 18785931 18785947 chr2R 18786010 18786024 8 79 3.5 8.5 6.0 1.1 93 chr2R 18785931 intron CG15080 + chr2R 18785978 intron CG15080 + chr2R 18786024 intron CG15080 + chr2R_8_18785001 chr2R_18785001 RAL-805 678 chr2R 18808158 18808174 chr2R 18808234 18808248 4 76 2.5 2.5 2.5 1.1 90 chr2R 18808158 intergenic CG15096 - chr2R 18808203 intergenic CG15096 - chr2R 18808248 intergenic CG15096 - chr2R_4_18805001 chr2R_18805001 RAL-805 679 chr2R 18964923 18964950 chr2R 18964999 18965026 8 76 3.0 1.5 2.2 2.5 103 chr2R 18964923 intergenic not near genes chr2R 18964974 intergenic not near genes chr2R 18965026 intergenic not near genes chr2R_8_18960001 chr2R_18960001 RAL-805 680 chr2R 19048309 19048343 chr2R 19048405 19048440 15 97 2.0 4.0 3.0 3.8 131 chr2R 19048309 intergenic not near genes chr2R 19048374 intergenic not near genes chr2R 19048440 intergenic not near genes chr2R_15_19045001 chr2R_19045001 RAL-805 681 chr2R 19108345 19108359 chr2R 19108648 19108662 6 304 2.5 3.5 3.0 1.5 317 chr2R 19108345 intron 5-HT1A + chr2R 19108504 intron 5-HT1A + chr2R 19108662 intron 5-HT1A + chr2R_6_19105001 chr2R_19105001 RAL-805 682 chr2R 19274939 19274968 chr2R 19275015 19275042 10 76 2.5 3.5 3.0 2.5 103 chr2R 19274939 intron rib + chr2R 19274990 intron rib + chr2R 19275042 intron rib + chr2R_10_19270001 chr2R_19270001 RAL-805 683 chr2R 19295726 19295733 chr2R 19295805 19295814 4 80 2.5 5.0 3.8 0.8 88 chr2R 19295726 intron Tab2 + chr2R 19295770 intron Tab2 + chr2R 19295814 intron Tab2 + chr2R_4_19295001 chr2R_19295001 RAL-805 684 chr2R 19300967 19300991 chr2R 19301050 19301074 9 83 4.5 3.5 4.0 1.8 107 chr2R 19300967 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301074 intron Tab2 + chr2R_9_19300001 chr2R_19300001 RAL-805 685 chr2R 19537426 19537444 chr2R 19537519 19537537 8 92 1.5 4.5 3.0 2.0 111 chr2R 19537426 intron sm - chr2R 19537482 intron sm - chr2R 19537537 intron sm - chr2R_8_19535001 chr2R_19535001 RAL-805 686 chr2R 19558548 19558581 chr2R 19558627 19558660 8 74 4.5 1.5 3.0 2.0 112 chr2R 19558548 intron sm - chr2R 19558604 intron sm - chr2R 19558660 intron sm - chr2R_8_19555001 chr2R_19555001 RAL-805 687 chr2R 19588746 19588781 chr2R 19588824 19588859 6 78 2.5 2.5 2.5 1.7 113 chr2R 19588746 intron sm - chr2R 19588802 intron sm - chr2R 19588859 intron sm - chr2R_6_19585001 chr2R_19585001 RAL-805 688 chr2R 19668477 19668490 chr2R 19668554 19668567 5 77 4.0 1.5 2.8 1.3 90 chr2R 19668477 5` UTR hrg - chr2R 19668522 intron hrg - chr2R 19668567 intron hrg - chr2R_5_19665001 chr2R_19665001 RAL-805 689 chr2R 19774015 19774022 chr2R 19774128 19774135 4 113 5.0 3.5 4.2 0.8 120 chr2R 19774015 intergenic not near genes chr2R 19774075 intergenic not near genes chr2R 19774135 intergenic not near genes chr2R_4_19770001 chr2R_19770001 RAL-805 690 chr2R 19774023 19774044 chr2R 19774126 19774157 8 112 2.5 3.5 3.0 2.0 134 chr2R 19774023 intergenic not near genes chr2R 19774090 intergenic not near genes chr2R 19774157 intergenic not near genes chr2R_8_19770001 chr2R_19770001 RAL-805 691 chr2R 19776594 19776629 chr2R 19779917 19779952 jockey 10 3323 3.5 4.0 3.8 2.1 3358 chr2R 19776594 intergenic not near genes chr2R 19778273 intergenic not near genes chr2R 19779952 intergenic not near genes chr2R_10_19775001 chr2R_19775001 RAL-805 692 chr2R 19914846 19914876 chr2R 19922258 19922284 mdg1 9 7412 2.5 5.0 3.8 1.9 7438 chr2R 19914846 intergenic not near genes chr2R 19918565 intergenic not near genes chr2R 19922284 intergenic not near genes chr2R_9_19915001 chr2R_19915001 RAL-805 693 chr2R 19936329 19936349 chr2R 19936414 19936434 5 85 1.0 1.0 1.0 2.5 105 chr2R 19936329 intergenic not near genes chr2R 19936382 intergenic not near genes chr2R 19936434 intergenic not near genes chr2R_5_19935001 chr2R_19935001 RAL-805 694 chr2R 19957433 19957454 chr2R 19962635 19962642 copia 9 5197 4.0 3.0 3.5 2.0 5209 chr2R 19957433 intergenic CG44623 + chr2R 19960038 intergenic not near genes chr2R 19962642 intergenic not near genes chr2R_9_19960001 chr2R_19960001 RAL-805 695 chr2R 20004775 20004785 chr2R 20004857 20004866 8 81 3.0 5.5 4.2 1.5 91 chr2R 20004775 exon CG16898 - chr2R 20004820 exon CG16898 - chr2R 20004866 exon CG16898 - chr2R_8_20000001 chr2R_20000001 RAL-805 696 chr2R 20026167 20026198 chr2R 20026269 20026300 9 102 2.5 6.0 4.2 1.7 133 chr2R 20026167 intergenic not near genes chr2R 20026234 intergenic not near genes chr2R 20026300 intergenic not near genes chr2R_9_20025001 chr2R_20025001 RAL-805 697 chr2R 20080602 20080623 chr2R 20080679 20080700 7 77 0.0 4.5 2.2 2.2 98 chr2R 20080602 intergenic not near genes chr2R 20080651 intergenic not near genes chr2R 20080700 intergenic not near genes chr2R_7_20080001 chr2R_20080001 RAL-805 698 chr2R 20125734 20125746 chr2R 20125810 20125822 8 76 0.5 3.5 2.0 2.7 88 chr2R 20125734 intergenic not near genes chr2R 20125778 intergenic not near genes chr2R 20125822 intergenic not near genes chr2R_8_20125001 chr2R_20125001 RAL-805 699 chr2R 20174641 20174674 chr2R 20174717 20174749 8 76 3.5 0.5 2.0 2.7 108 chr2R 20174641 intergenic not near genes chr2R 20174695 intergenic not near genes chr2R 20174749 intergenic not near genes chr2R_8_20170001 chr2R_20170001 RAL-805 700 chr2R 20223955 20223976 chr2R 20224040 20224061 7 85 5.5 0.5 3.0 1.8 106 chr2R 20223955 intergenic not near genes chr2R 20224008 intergenic not near genes chr2R 20224061 intergenic not near genes chr2R_7_20220001 chr2R_20220001 RAL-805 701 chr2R 20382335 20382356 chr2R 20382420 20382440 5 83 4.0 2.5 3.2 1.2 105 chr2R 20382335 intergenic not near genes chr2R 20382388 intergenic not near genes chr2R 20382440 intergenic not near genes chr2R_5_20380001 chr2R_20380001 RAL-805 702 chr2R 20395020 20395058 chr2R 20395192 20395234 8 174 5.0 0.0 2.5 2.3 214 chr2R 20395020 intergenic not near genes chr2R 20395127 intergenic not near genes chr2R 20395234 intergenic not near genes chr2R_8_20395001 chr2R_20395001 RAL-805 703 chr2R 20523047 20523066 chr2R 20523156 20523176 9 108 4.0 4.5 4.2 1.7 129 chr2R 20523047 intergenic not near genes chr2R 20523112 intergenic not near genes chr2R 20523176 intergenic not near genes chr2R_9_20520001 chr2R_20520001 RAL-805 704 chr2R 20678213 20678234 chr2R 20678343 20678364 8 128 1.5 4.0 2.8 2.1 151 chr2R 20678213 intergenic not near genes chr2R 20678288 intergenic not near genes chr2R 20678364 intergenic not near genes chr2R_8_20675001 chr2R_20675001 RAL-805 705 chr2R 20739442 20739473 chr2R 20744210 20744241 F-element 8 4767 3.0 1.0 2.0 2.7 4799 chr2R 20739442 intron dpr + chr2R 20741842 intron dpr + chr2R 20744241 intron dpr + chr2R_8_20740001 chr2R_20740001 RAL-805 706 chr2R 20783316 20783333 chr2R 20788088 20788105 F-element 4 4772 2.0 4.0 3.0 1.0 4789 chr2R 20783316 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788105 intergenic CG43666 - chr2R_4_20785001 chr2R_20785001 RAL-805 707 chr2R 20796051 20796078 chr2R 20796164 20796191 5 112 1.5 2.5 2.0 1.7 140 chr2R 20796051 intergenic not near genes chr2R 20796121 intergenic not near genes chr2R 20796191 intergenic not near genes chr2R_5_20795001 chr2R_20795001 RAL-805 708 chr2R 20863117 20863140 chr2R 20863203 20863225 5 86 3.0 1.5 2.2 1.6 108 chr2R 20863117 intergenic not near genes chr2R 20863171 intergenic not near genes chr2R 20863225 intergenic not near genes chr2R_5_20860001 chr2R_20860001 RAL-805 709 chr2R 21476802 21476820 chr2R 21476978 21477004 5 181 4.5 3.5 4.0 1.0 202 chr2R 21476802 intron Sdc - chr2R 21476903 intron Sdc - chr2R 21477004 intron Sdc - chr2R_5_21475001 chr2R_21475001 RAL-805 710 chr2R 21534110 21534141 chr2R 21534197 21534228 10 85 3.0 4.0 3.5 2.2 118 chr2R 21534110 intron Egfr + chr2R 21534169 intron Egfr + chr2R 21534228 intron Egfr + chr2R_10_21530001 chr2R_21530001 RAL-805 711 chr2R 21671540 21671574 chr2R 21671618 21671652 10 78 2.0 3.5 2.8 2.6 112 chr2R 21671540 3` UTR NC2alpha + chr2R 21671596 intergenic NC2alpha +,CG15676 + chr2R 21671652 intergenic CG15676 +,NC2alpha + chr2R_10_21670001 chr2R_21670001 RAL-805 712 chr2R 21700155 21700182 chr2R 21700240 21700266 7 80 4.5 5.0 4.8 1.2 111 chr2R 21700155 intron HmgZ - chr2R 21700210 intron HmgZ - chr2R 21700266 intron HmgZ - chr2R_7_21700001 chr2R_21700001 RAL-805 713 chr2R 21753084 21753115 chr2R 21753569 21753600 roo 12 484 6.0 4.5 5.2 1.9 516 chr2R 21753084 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753600 intergenic not near genes chr2R_12_21750001 chr2R_21750001 RAL-805 714 chr2R 21772230 21772251 chr2R 21772311 21772331 6 80 2.0 5.5 3.8 1.2 101 chr2R 21772230 intergenic not near genes chr2R 21772280 intergenic not near genes chr2R 21772331 intergenic not near genes chr2R_6_21770001 chr2R_21770001 RAL-805 715 chr2R 21809523 21809554 chr2R 21817763 21817786 roo 8 8239 2.0 5.0 3.5 1.8 8263 chr2R 21809523 intergenic not near genes chr2R 21813654 intergenic not near genes chr2R 21817786 intergenic not near genes chr2R_8_21810001 chr2R_21810001 RAL-805 716 chr2R 21857351 21857370 chr2R 21857442 21857461 4 88 5.0 1.0 3.0 1.0 110 chr2R 21857351 intergenic not near genes chr2R 21857406 intergenic not near genes chr2R 21857461 intergenic not near genes chr2R_4_21855001 chr2R_21855001 RAL-805 717 chr2R 21919873 21919907 chr2R 21919960 21919995 10 88 3.0 4.5 3.8 2.1 122 chr2R 21919873 intron Fili + chr2R 21919934 intron Fili + chr2R 21919995 intron Fili + chr2R_10_21915001 chr2R_21915001 RAL-805 718 chr2R 21932249 21932281 chr2R 21932327 21932359 12 77 2.5 2.5 2.5 3.4 110 chr2R 21932249 intron Fili + chr2R 21932304 intron Fili + chr2R 21932359 intron Fili + chr2R_12_21930001 chr2R_21930001 RAL-805 719 chr2R 22061966 22061993 chr2R 22062098 22062125 8 132 1.0 5.5 3.2 1.9 159 chr2R 22061966 intron Snp + chr2R 22062046 intron Snp + chr2R 22062125 intron Snp + chr2R_8_22060001 chr2R_22060001 RAL-805 720 chr2R 22072682 22072712 chr2R 22072767 22072797 14 85 4.0 2.0 3.0 3.5 115 chr2R 22072682 intron CG11474 - chr2R 22072740 intron CG11474 - chr2R 22072797 exon CG11474 - chr2R_14_22070001 chr2R_22070001 RAL-805 721 chr2R 22118427 22118451 chr2R 22118505 22118529 10 78 1.0 3.0 2.0 3.3 102 chr2R 22118427 intron Vrp1 - chr2R 22118478 intron Vrp1 - chr2R 22118529 intron Vrp1 - chr2R_10_22115001 chr2R_22115001 RAL-805 722 chr2R 22124305 22124324 chr2R 22124394 22124413 4 89 5.0 3.0 4.0 0.8 108 chr2R 22124305 3` UTR mei-S332 + chr2R 22124359 3` UTR mei-S332 + chr2R 22124413 intergenic mei-S332 +,GM130 - chr2R_4_22120001 chr2R_22120001 RAL-805 723 chr2R 22185676 22185706 chr2R 22185775 22185805 4 99 0.5 0.0 0.2 3.3 129 chr2R 22185676 3` UTR MED16 + chr2R 22185740 3` UTR MED16 + chr2R 22185805 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-805 724 chr2R 22189444 22189476 chr2R 22189571 22189603 6 127 0.5 2.5 1.5 2.4 159 chr2R 22189444 3` UTR Vps35 + chr2R 22189524 3` UTR Vps35 + chr2R 22189603 3` UTR Vps35 + chr2R_6_22185001 chr2R_22185001 RAL-805 725 chr2R 22297712 22297725 chr2R 22297788 22297801 5 76 0.0 2.5 1.2 2.3 89 chr2R 22297712 intergenic not near genes chr2R 22297756 intergenic wdp - chr2R 22297801 intergenic wdp - chr2R_5_22295001 chr2R_22295001 RAL-805 726 chr2R 22334481 22334512 chr2R 22334557 22334561 9 67 2.0 2.0 2.0 3.0 80 chr2R 22334481 exon Liprin-gamma - chr2R 22334521 exon Liprin-gamma - chr2R 22334561 exon Liprin-gamma - chr2R_9_22330001 chr2R_22330001 RAL-805 727 chr2R 22349690 22349716 chr2R 22351474 22351500 jockey 5 1783 6.0 3.5 4.8 0.9 1810 chr2R 22349690 intron Liprin-gamma - chr2R 22350595 intron Liprin-gamma - chr2R 22351500 intron Liprin-gamma - chr2R_5_22350001 chr2R_22350001 RAL-805 728 chr2R 22360380 22360395 chr2R 22360813 22360827 jockey 12 432 10.0 4.0 7.0 1.5 447 chr2R 22360380 intron Liprin-gamma - chr2R 22360604 intron Liprin-gamma - chr2R 22360827 intron Liprin-gamma - chr2R_12_22360001 chr2R_22360001 RAL-805 729 chr2R 22525750 22525784 chr2R 22529305 22529339 jockey 15 3555 2.5 4.0 3.2 3.6 3589 chr2R 22525750 intron px - chr2R 22527544 intron px - chr2R 22529339 intron px - chr2R_15_22525001 chr2R_22525001 RAL-805 730 chr2R 22545621 22545649 chr2R 22545700 22545728 7 79 1.0 4.0 2.5 2.0 107 chr2R 22545621 intron px - chr2R 22545674 intron px - chr2R 22545728 intron px - chr2R_7_22545001 chr2R_22545001 RAL-805 731 chr2R 22588143 22588157 chr2R 22588243 22588256 4 101 4.0 5.0 4.5 0.7 113 chr2R 22588143 intron dnr1 - chr2R 22588200 intron dnr1 - chr2R 22588256 intron dnr1 - chr2R_4_22585001 chr2R_22585001 RAL-805 732 chr2R 22623456 22623481 chr2R 22623595 22623621 11 139 3.5 5.5 4.5 2.0 165 chr2R 22623456 intron CG33143 + chr2R 22623538 intron CG33143 + chr2R 22623621 intron CG33143 + chr2R_11_22620001 chr2R_22620001 RAL-805 733 chr2R 22756551 22756585 chr2R 22756628 22756662 10 76 3.5 4.0 3.8 2.1 111 chr2R 22756551 intron,intron CG42260 -,CR30267 + chr2R 22756606 intron,intron CG42260 -,CR30267 + chr2R 22756662 intron,intron CG42260 -,CR30267 + chr2R_10_22755001 chr2R_22755001 RAL-805 734 chr2R 22774959 22775001 chr2R 22775378 22775420 jockey 16 418 4.0 2.5 3.2 3.8 461 chr2R 22774959 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775420 intron CG42260 - chr2R_16_22775001 chr2R_22775001 RAL-805 735 chr2R 22781973 22781985 chr2R 22782141 22782172 4 180 0.0 1.0 0.5 2.7 199 chr2R 22781973 intron CG42260 - chr2R 22782072 intron CG42260 - chr2R 22782172 intron CG42260 - chr2R_4_22780001 chr2R_22780001 RAL-805 736 chr2R 22818307 22818328 chr2R 22818384 22818405 6 77 5.5 1.5 3.5 1.3 98 chr2R 22818307 intron CG30271 + chr2R 22818356 intron CG30271 + chr2R 22818405 intron CG30271 + chr2R_6_22815001 chr2R_22815001 RAL-805 737 chr2R 22970696 22970712 chr2R 22972136 22972152 6 1439 10.5 14.5 12.5 0.4 1456 chr2R 22970696 intergenic not near genes chr2R 22971424 intergenic not near genes chr2R 22972152 intergenic not near genes chr2R_6_22970001 chr2R_22970001 RAL-805 738 chr2R 22970483 22970509 chr2R 22972710 22972736 14 2228 10.5 26.5 18.5 0.7 2253 chr2R 22970483 intergenic not near genes chr2R 22971610 intergenic not near genes chr2R 22972736 intergenic not near genes chr2R_14_22970001 chr2R_22970001 RAL-805 739 chr2R 22972836 22972856 chr2R 22972930 22972951 10 94 4.0 5.5 4.8 1.7 115 chr2R 22972836 intergenic not near genes chr2R 22972894 intergenic not near genes chr2R 22972951 intergenic not near genes chr2R_10_22970001 chr2R_22970001 RAL-805 740 chr2R 22988314 22988323 chr2R 22988395 22988404 5 81 2.5 5.0 3.8 1.0 90 chr2R 22988314 intron twi + chr2R 22988359 intron twi + chr2R 22988404 intron twi + chr2R_5_22985001 chr2R_22985001 RAL-805 741 chr2R 23052655 23052689 chr2R 23052731 23052732 8 72 3.0 1.5 2.2 2.5 77 chr2R 23052655 intergenic not near genes chr2R 23052694 intergenic not near genes chr2R 23052732 intergenic not near genes chr2R_8_23050001 chr2R_23050001 RAL-805 742 chr2R 23053998 23054032 chr2R 23054076 23054110 16 77 2.5 2.5 2.5 4.6 112 chr2R 23053998 intergenic not near genes chr2R 23054054 intergenic not near genes chr2R 23054110 intergenic not near genes chr2R_16_23050001 chr2R_23050001 RAL-805 743 chr2R 23070408 23070441 chr2R 23070504 23070537 10 96 1.5 2.5 2.0 3.3 129 chr2R 23070408 intron l(2)k09913 + chr2R 23070472 intron l(2)k09913 + chr2R 23070537 intron l(2)k09913 + chr2R_10_23070001 chr2R_23070001 RAL-805 744 chr2R 23130550 23130578 chr2R 23130642 23130672 6 92 2.0 2.5 2.2 1.9 122 chr2R 23130550 intergenic CG3215 - chr2R 23130611 intergenic CG3215 - chr2R 23130672 intergenic CG3215 - chr2R_6_23130001 chr2R_23130001 RAL-805 745 chr2R 23225707 23225720 chr2R 23226350 23226363 8 642 3.0 4.5 3.8 1.7 656 chr2R 23225707 intergenic not near genes chr2R 23226035 intergenic not near genes chr2R 23226363 intergenic not near genes chr2R_8_23225001 chr2R_23225001 RAL-805 746 chr2R 23452658 23452684 chr2R 23453657 23453683 11 999 2.5 3.0 2.8 2.9 1025 chr2R 23452658 intron CG43795 + chr2R 23453170 intron CG43795 + chr2R 23453683 intron CG43795 + chr2R_11_23450001 chr2R_23450001 RAL-805 747 chr2R 23454633 23454678 chr2R 23454769 23454799 15 135 0.0 4.0 2.0 5.0 166 chr2R 23454633 intron CG43795 + chr2R 23454716 intron CG43795 + chr2R 23454799 intron CG43795 + chr2R_15_23450001 chr2R_23450001 RAL-805 748 chr2R 23589179 23589193 chr2R 23589256 23589270 8 76 8.0 4.5 6.2 1.1 91 chr2R 23589179 intron apt + chr2R 23589224 intron apt + chr2R 23589270 intron apt + chr2R_8_23585001 chr2R_23585001 RAL-805 749 chr2R 23607035 23607188 chr2R 23607116 23607281 11 82 1.5 1.5 1.5 4.4 246 chr2R 23607035 intron CG17664 - chr2R 23607158 intron CG17664 - chr2R 23607281 intron CG17664 - chr2R_11_23605001 chr2R_23605001 RAL-805 750 chr2R 23674181 23674192 chr2R 23674261 23674272 9 80 5.5 5.0 5.2 1.5 91 chr2R 23674181 intron Pde8 + chr2R 23674226 intron Pde8 + chr2R 23674272 intron Pde8 + chr2R_9_23670001 chr2R_23670001 RAL-805 751 chr2R 23747332 23747353 chr2R 23748959 23748980 4 1627 30.0 7.0 18.5 0.2 1648 chr2R 23747332 intergenic CG13560 + chr2R 23748156 3` UTR CG13560 + chr2R 23748980 intergenic CG12491 -,CG34105 - chr2R_4_23745001 chr2R_23745001 RAL-805 752 chr2R 23831302 23831312 chr2R 23831384 23831394 7 81 4.0 5.0 4.5 1.3 92 chr2R 23831302 intron CG5549 + chr2R 23831348 intron CG5549 + chr2R 23831394 intron CG5549 + chr2R_7_23830001 chr2R_23830001 RAL-805 753 chr2R 23940201 23940235 chr2R 23940286 23940320 6 85 4.0 4.0 4.0 1.2 119 chr2R 23940201 intergenic Tal +,CG3735 - chr2R 23940260 intergenic Tal + chr2R 23940320 intergenic Tal + chr2R_6_23940001 chr2R_23940001 RAL-805 754 chr2R 23986519 23986548 chr2R 23986599 23986628 8 80 1.5 2.0 1.8 2.9 109 chr2R 23986519 intron Phm - chr2R 23986574 intron Phm - chr2R 23986628 intron,5` UTR Phm -,CG30178 + chr2R_8_23985001 chr2R_23985001 RAL-805 755 chr2R 24031379 24031411 chr2R 24031463 24031495 16 82 3.0 2.0 2.5 4.6 116 chr2R 24031379 5` UTR CG30172 - chr2R 24031437 intergenic CG30172 -,Chi - chr2R 24031495 intergenic Chi -,CG30172 - chr2R_16_24030001 chr2R_24030001 RAL-805 756 chr2R 24045235 24045252 chr2R 24045312 24045336 11 83 7.5 5.5 6.5 1.5 101 chr2R 24045235 intron tsr - chr2R 24045286 intron tsr - chr2R 24045336 intron tsr - chr2R_11_24045001 chr2R_24045001 RAL-805 757 chr2R 24147084 24147091 chr2R 24154661 24154668 412 4 7576 4.0 8.5 6.2 0.6 7584 chr2R 24147084 intron Dat + chr2R 24150876 intron Dat + chr2R 24154668 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-805 758 chr2R 24177236 24177268 chr2R 24184721 24184753 412 8 7485 3.5 1.5 2.5 2.3 7517 chr2R 24177236 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184753 3` UTR Nop60B + chr2R_8_24180001 chr2R_24180001 RAL-805 759 chr2R 24218124 24218153 chr2R 24218756 24218784 9 632 0.0 0.5 0.2 7.5 660 chr2R 24218124 intron CG30419 - chr2R 24218454 intron CG30419 - chr2R 24218784 intron CG30419 - chr2R_9_24215001 chr2R_24215001 RAL-805 760 chr2R 24353432 24353460 chr2R 24361794 24361821 roo 8 8361 1.5 6.0 3.8 1.7 8389 chr2R 24353432 intron,intron bs +,CR44811 - chr2R 24357626 intron,intron bs +,CR44811 - chr2R 24361821 intron,intron bs +,CR44811 - chr2R_8_24355001 chr2R_24355001 RAL-805 761 chr2R 24509308 24509336 chr2R 24509393 24509420 11 82 3.5 6.5 5.0 1.8 112 chr2R 24509308 intergenic Letm1 - chr2R 24509364 intergenic Letm1 - chr2R 24509420 intergenic Letm1 - chr2R_11_24505001 chr2R_24505001 RAL-805 762 chr2R 24542593 24542611 chr2R 24542689 24542705 6 96 6.5 0.5 3.5 1.3 112 chr2R 24542593 intron,intron CG4622 -,ITP + chr2R 24542649 intron,intron CG4622 -,ITP + chr2R 24542705 intron,intron CG4622 -,ITP + chr2R_6_24540001 chr2R_24540001 RAL-805 763 chr2R 24553635 24553663 chr2R 24553728 24553762 11 97 5.5 4.5 5.0 1.8 127 chr2R 24553635 intron,intron CG4622 -,ITP + chr2R 24553698 intron,intron CG4622 -,ITP + chr2R 24553762 intron,intron CG4622 -,ITP + chr2R_11_24550001 chr2R_24550001 RAL-805 764 chr2R 24633065 24633078 chr2R 24637712 24637731 4 4646 19.5 24.0 21.8 0.2 4666 chr2R 24633065 intron CG13594 - chr2R 24635398 intron CG13594 - chr2R 24637731 intron CG13594 - chr2R_4_24635001 chr2R_24635001 RAL-805 765 chr2R 24647596 24647612 chr2R 24655144 24655169 412 6 7555 7.0 4.0 5.5 0.9 7573 chr2R 24647596 intergenic not near genes chr2R 24651382 intergenic not near genes chr2R 24655169 intergenic not near genes chr2R_6_24650001 chr2R_24650001 RAL-805 766 chr2R 24727888 24727907 chr2R 24735396 24735415 mdg1 7 7507 3.5 2.5 3.0 1.8 7527 chr2R 24727888 intron Mid1 - chr2R 24731652 intron Mid1 - chr2R 24735415 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-805 767 chr2R 24763616 24763639 chr2R 24765586 24765615 G2 8 1972 3.5 3.0 3.2 1.9 1999 chr2R 24763616 exon CG3894 + chr2R 24764616 intron CG3894 + chr2R 24765615 exon CG3894 + chr2R_8_24760001 chr2R_24760001 RAL-805 768 chr2R 24859840 24859863 chr2R 24859925 24859949 6 86 2.5 2.5 2.5 1.7 109 chr2R 24859840 5` UTR CR44829 + chr2R 24859894 5` UTR CR44829 + chr2R 24859949 5` UTR CR44829 + chr2R_6_24855001 chr2R_24855001 RAL-805 769 chr2R 24884051 24884076 chr2R 24884133 24884158 10 82 4.0 1.5 2.8 2.6 107 chr2R 24884051 intron NKAIN + chr2R 24884104 intron NKAIN + chr2R 24884158 intron NKAIN + chr2R_10_24880001 chr2R_24880001 RAL-805 770 chr2R 25017758 25017767 chr2R 25017841 25017850 6 82 9.5 14.0 11.8 0.5 92 chr2R 25017758 intron uzip + chr2R 25017804 intron uzip + chr2R 25017850 intron uzip + chr2R_6_25015001 chr2R_25015001 RAL-805 771 chr2R 25022643 25022673 chr2R 25022727 25022757 5 84 0.5 3.5 2.0 1.7 114 chr2R 25022643 intron uzip + chr2R 25022700 intron uzip + chr2R 25022757 intron uzip + chr2R_5_25020001 chr2R_25020001 RAL-805 772 chr2R 25061336 25061352 chr2R 25061419 25061425 6 81 5.0 2.0 3.5 1.3 89 chr2R 25061336 intergenic not near genes chr2R 25061380 intergenic not near genes chr2R 25061425 intergenic not near genes chr2R_6_25060001 chr2R_25060001 RAL-805 773 chr2R 25081607 25081638 chr2R 25082702 25082734 15 1094 4.5 2.0 3.2 3.6 1127 chr2R 25081607 intron gol - chr2R 25082170 intron gol - chr2R 25082734 intron gol - chr2R_15_25080001 chr2R_25080001 RAL-805 774 chr2R 25101278 25101301 chr2R 25101380 25101403 7 102 3.5 2.5 3.0 1.8 125 chr2R 25101278 intron lov - chr2R 25101340 intron lov - chr2R 25101403 intron lov - chr2R_7_25100001 chr2R_25100001 RAL-805 775 chr2R 25234765 25234789 chr2R 25234845 25234869 7 80 3.0 2.5 2.8 1.8 104 chr2R 25234765 intron CG9380 - chr2R 25234817 intron CG9380 - chr2R 25234869 intron CG9380 - chr2R_7_25230001 chr2R_25230001 RAL-805 776 chr3L 68981 69015 chr3L 69068 69102 11 86 4.0 1.0 2.5 3.1 121 chr3L 68981 3` UTR Lsp1gamma + chr3L 69042 intergenic Lsp1gamma +,CR44510 + chr3L 69102 intergenic CR44510 +,Lsp1gamma + chr3L_11_65001 chr3L_65001 RAL-805 777 chr3L 78607 78636 chr3L 78857 78886 7 249 2.5 2.0 2.2 2.2 279 chr3L 78607 intergenic not near genes chr3L 78746 intergenic not near genes chr3L 78886 intergenic not near genes chr3L_7_75001 chr3L_75001 RAL-805 778 chr3L 88742 88778 chr3L 90662 90698 12 1920 2.0 2.0 2.0 4.0 1956 chr3L 88742 intergenic not near genes chr3L 89720 intergenic not near genes chr3L 90698 intergenic not near genes chr3L_12_85001 chr3L_85001 RAL-805 779 chr3L 110222 110245 chr3L 119388 119412 roo 5 9167 2.0 5.0 3.5 1.1 9190 chr3L 110222 intergenic not near genes chr3L 114817 intergenic not near genes chr3L 119412 intergenic not near genes chr3L_5_110001 chr3L_110001 RAL-805 780 chr3L 159304 159341 chr3L 159399 159435 14 94 1.5 4.0 2.8 3.7 131 chr3L 159304 intron p130CAS + chr3L 159370 intron p130CAS + chr3L 159435 intron p130CAS + chr3L_14_155001 chr3L_155001 RAL-805 781 chr3L 180668 180695 chr3L 183771 183798 17 3104 32.0 31.0 31.5 0.5 3130 chr3L 180668 intron CG13875 + chr3L 182233 exon CG13875 + chr3L 183798 exon,5` UTR CG34140 -,Mkp - chr3L_17_180001 chr3L_180001 RAL-805 782 chr3L 402687 402713 chr3L 409740 409765 297 7 7053 2.0 5.0 3.5 1.6 7078 chr3L 402687 intergenic not near genes chr3L 406226 intergenic not near genes chr3L 409765 intergenic not near genes chr3L_7_405001 chr3L_405001 RAL-805 783 chr3L 606894 606920 chr3L 606970 606999 5 77 1.0 0.0 0.5 3.3 105 chr3L 606894 intergenic Reg-2 - chr3L 606946 intergenic Reg-2 - chr3L 606999 intergenic Reg-2 - chr3L_5_605001 chr3L_605001 RAL-805 784 chr3L 642471 642491 chr3L 642562 642580 4 90 3.5 5.0 4.2 0.8 109 chr3L 642471 5` UTR CR43334 + chr3L 642526 5` UTR CR43334 + chr3L 642580 5` UTR CR43334 + chr3L_4_640001 chr3L_640001 RAL-805 785 chr3L 705904 705932 chr3L 706000 706028 8 96 4.0 4.0 4.0 1.6 124 chr3L 705904 intergenic CG13895 -,CR44514 + chr3L 705966 3` UTR CG13895 - chr3L 706028 3` UTR CG13895 - chr3L_8_705001 chr3L_705001 RAL-805 786 chr3L 732827 732846 chr3L 733048 733068 4 222 2.5 2.5 2.5 1.1 241 chr3L 732827 intergenic not near genes chr3L 732948 intergenic not near genes chr3L 733068 intergenic not near genes chr3L_4_730001 chr3L_730001 RAL-805 787 chr3L 858001 858030 chr3L 866480 866484 Tirant 8 8475 3.5 2.5 3.0 2.0 8483 chr3L 858001 intergenic not near genes chr3L 862242 intergenic not near genes chr3L 866484 intergenic CG12502 + chr3L_8_860001 chr3L_860001 RAL-805 788 chr3L 899987 900020 chr3L 900071 900104 11 84 0.0 1.0 0.5 7.3 117 chr3L 899987 intergenic not near genes chr3L 900046 intergenic not near genes chr3L 900104 intergenic not near genes chr3L_11_900001 chr3L_900001 RAL-805 789 chr3L 901430 901450 chr3L 901504 901532 5 75 2.0 1.0 1.5 2.0 102 chr3L 901430 intergenic not near genes chr3L 901481 intergenic not near genes chr3L 901532 intergenic not near genes chr3L_5_900001 chr3L_900001 RAL-805 790 chr3L 925178 925210 chr3L 932604 932632 mdg1 9 7426 1.5 4.5 3.0 2.2 7454 chr3L 925178 intron Glut1 + chr3L 928905 intron Glut1 + chr3L 932632 intron Glut1 + chr3L_9_925001 chr3L_925001 RAL-805 791 chr3L 933915 933943 chr3L 934018 934046 8 103 2.0 4.0 3.0 2.0 131 chr3L 933915 intron Glut1 + chr3L 933980 intron Glut1 + chr3L 934046 intron Glut1 + chr3L_8_930001 chr3L_930001 RAL-805 792 chr3L 939774 939797 chr3L 940894 940918 jockey 4 1121 3.5 8.5 6.0 0.6 1144 chr3L 939774 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940918 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-805 793 chr3L 1000282 1000300 chr3L 1000358 1000382 9 82 2.0 3.0 2.5 2.6 100 chr3L 1000282 intron trio - chr3L 1000332 intron trio - chr3L 1000382 intron trio - chr3L_9_1000001 chr3L_1000001 RAL-805 794 chr3L 1031575 1031613 chr3L 1031651 1031677 5 73 7.5 2.5 5.0 0.8 102 chr3L 1031575 intron trio - chr3L 1031626 intron trio - chr3L 1031677 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-805 795 chr3L 1047350 1047385 chr3L 1055162 1055197 412 5 7807 2.5 5.0 3.8 1.0 7847 chr3L 1047350 intron bab1 - chr3L 1051274 intron bab1 - chr3L 1055197 intron bab1 - chr3L_5_1050001 chr3L_1050001 RAL-805 796 chr3L 1154130 1154158 chr3L 1163280 1163301 roo 6 9149 2.5 2.0 2.2 1.9 9171 chr3L 1154130 intron bab2 - chr3L 1158716 intron bab2 - chr3L 1163301 intron bab2 - chr3L_6_1155001 chr3L_1155001 RAL-805 797 chr3L 1219594 1219625 chr3L 1227327 1227357 412 8 7733 1.0 4.0 2.5 2.3 7763 chr3L 1219594 intron mwh + chr3L 1223476 intron mwh + chr3L 1227357 intron mwh + chr3L_8_1220001 chr3L_1220001 RAL-805 798 chr3L 1310981 1311012 chr3L 1315842 1315875 10 4863 26.0 27.5 26.8 0.4 4894 chr3L 1310981 exon CG2469 + chr3L 1313428 intergenic CG9186 -,CG9153 + chr3L 1315875 exon CG9153 + chr3L_10_1310001 chr3L_1310001 RAL-805 799 chr3L 1361762 1361773 chr3L 1361842 1361853 4 80 0.5 3.0 1.8 1.4 91 chr3L 1361762 intron Ptp61F - chr3L 1361808 intron Ptp61F - chr3L 1361853 intron Ptp61F - chr3L_4_1360001 chr3L_1360001 RAL-805 800 chr3L 1374436 1374447 chr3L 1374512 1374524 4 76 7.5 2.5 5.0 0.7 88 chr3L 1374436 intron,intron Ptp61F -,ru + chr3L 1374480 intron,intron Ptp61F -,ru + chr3L 1374524 intron,intron Ptp61F -,ru + chr3L_4_1370001 chr3L_1370001 RAL-805 801 chr3L 1378935 1378953 chr3L 1379012 1379024 5 73 6.5 0.0 3.2 1.2 89 chr3L 1378935 intron,intron Ptp61F -,ru + chr3L 1378980 intron,intron Ptp61F -,ru + chr3L 1379024 intron,intron Ptp61F -,ru + chr3L_5_1375001 chr3L_1375001 RAL-805 802 chr3L 1385173 1385210 chr3L 1385261 1385298 13 88 2.0 2.0 2.0 4.3 125 chr3L 1385173 intron,intron Ptp61F -,ru + chr3L 1385236 intron,intron Ptp61F -,ru + chr3L 1385298 intron,intron Ptp61F -,ru + chr3L_13_1385001 chr3L_1385001 RAL-805 803 chr3L 1501996 1502019 chr3L 1502077 1502100 6 80 3.5 1.5 2.5 1.7 104 chr3L 1501996 intron pUf68 - chr3L 1502048 intron pUf68 - chr3L 1502100 intron pUf68 - chr3L_6_1500001 chr3L_1500001 RAL-805 804 chr3L 1505999 1506033 chr3L 1513596 1513628 17.6 17 7596 3.5 4.0 3.8 3.5 7629 chr3L 1505999 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513628 intron,intron Psa +,cue - chr3L_17_1505001 chr3L_1505001 RAL-805 805 chr3L 1662899 1662922 chr3L 1662975 1662998 9 76 2.0 2.0 2.0 3.0 99 chr3L 1662899 intron CG7971 - chr3L 1662948 intron CG7971 - chr3L 1662998 intron CG7971 - chr3L_9_1660001 chr3L_1660001 RAL-805 806 chr3L 1673587 1673592 chr3L 1673670 1673675 4 83 5.0 3.0 4.0 0.8 88 chr3L 1673587 intergenic not near genes chr3L 1673631 intergenic not near genes chr3L 1673675 intergenic not near genes chr3L_4_1670001 chr3L_1670001 RAL-805 807 chr3L 1740852 1740884 chr3L 1741095 1741123 pogo 6 242 4.0 1.5 2.8 1.6 271 chr3L 1740852 intron Gk + chr3L 1740988 intron Gk + chr3L 1741123 intron Gk + chr3L_6_1740001 chr3L_1740001 RAL-805 808 chr3L 1853045 1853054 chr3L 1853129 1853136 4 84 2.0 0.5 1.2 1.8 91 chr3L 1853045 intron CG13936 - chr3L 1853090 intron CG13936 - chr3L 1853136 intron CG13936 - chr3L_4_1850001 chr3L_1850001 RAL-805 809 chr3L 1922456 1922479 chr3L 1922534 1922539 5 74 5.0 6.0 5.5 0.8 83 chr3L 1922456 intron Dbx + chr3L 1922498 intron Dbx + chr3L 1922539 intron Dbx + chr3L_5_1920001 chr3L_1920001 RAL-805 810 chr3L 1923018 1923042 chr3L 1923108 1923132 11 90 2.0 4.0 3.0 2.8 114 chr3L 1923018 intron Dbx + chr3L 1923075 intron Dbx + chr3L 1923132 intron Dbx + chr3L_11_1920001 chr3L_1920001 RAL-805 811 chr3L 2139208 2139233 chr3L 2139289 2139313 5 81 4.5 4.5 4.5 0.9 105 chr3L 2139208 intron zormin - chr3L 2139260 intron zormin - chr3L 2139313 intron zormin - chr3L_5_2135001 chr3L_2135001 RAL-805 812 chr3L 2168777 2168808 chr3L 2168868 2168898 14 90 2.0 4.0 3.0 3.5 121 chr3L 2168777 exon CG15879 - chr3L 2168838 intron CG15879 - chr3L 2168898 intron CG15879 - chr3L_14_2165001 chr3L_2165001 RAL-805 813 chr3L 2218480 2218508 chr3L 2218549 2218584 9 75 7.5 2.0 4.8 1.6 104 chr3L 2218480 intergenic not near genes chr3L 2218532 intergenic not near genes chr3L 2218584 intergenic not near genes chr3L_9_2215001 chr3L_2215001 RAL-805 814 chr3L 2282989 2283022 chr3L 2283064 2283098 15 76 0.5 3.5 2.0 5.0 109 chr3L 2282989 5` UTR MsR2 + chr3L 2283044 5` UTR MsR2 + chr3L 2283098 5` UTR MsR2 + chr3L_15_2280001 chr3L_2280001 RAL-805 815 chr3L 2308002 2308036 chr3L 2308108 2308142 14 105 4.0 3.0 3.5 3.1 140 chr3L 2308002 intergenic not near genes chr3L 2308072 intergenic not near genes chr3L 2308142 intergenic not near genes chr3L_14_2305001 chr3L_2305001 RAL-805 816 chr3L 2337287 2337321 chr3L 2337389 2337424 19 102 1.5 2.0 1.8 6.8 137 chr3L 2337287 intron MsR1 + chr3L 2337356 intron MsR1 + chr3L 2337424 intron MsR1 + chr3L_19_2335001 chr3L_2335001 RAL-805 817 chr3L 2382704 2382731 chr3L 2382786 2382813 8 82 5.0 4.5 4.8 1.4 109 chr3L 2382704 intergenic not near genes chr3L 2382758 intergenic not near genes chr3L 2382813 intergenic not near genes chr3L_8_2380001 chr3L_2380001 RAL-805 818 chr3L 2447506 2447536 chr3L 2456661 2456692 roo 10 9154 3.0 5.0 4.0 2.0 9186 chr3L 2447506 intron CG45186 + chr3L 2452099 intron CG45186 + chr3L 2456692 intron CG45186 + chr3L_10_2450001 chr3L_2450001 RAL-805 819 chr3L 2927837 2927862 chr3L 2936114 2936139 Tirant 7 8277 3.5 0.5 2.0 2.3 8302 chr3L 2927837 intron Shab + chr3L 2931988 intron Shab + chr3L 2936139 intron Shab + chr3L_7_2930001 chr3L_2930001 RAL-805 820 chr3L 3165350 3165382 chr3L 3165431 3165465 12 81 3.5 3.5 3.5 2.7 115 chr3L 3165350 intron,intron Asciz -,CG32280 + chr3L 3165408 intron,intron Asciz -,CG32280 + chr3L 3165465 intron,intron Asciz -,CG32280 + chr3L_12_3165001 chr3L_3165001 RAL-805 821 chr3L 3178730 3178757 chr3L 3178813 3178840 12 83 2.5 0.0 1.2 5.5 110 chr3L 3178730 intergenic CG14964 -,Girdin + chr3L 3178785 intergenic Girdin +,CG14964 - chr3L 3178840 intergenic Girdin +,CG14964 - chr3L_12_3175001 chr3L_3175001 RAL-805 822 chr3L 3281441 3281469 chr3L 3281936 3281939 Doc 5 491 2.0 2.5 2.2 1.6 498 chr3L 3281441 intron CG12017 + chr3L 3281690 intron CG12017 + chr3L 3281939 intron CG12017 + chr3L_5_3280001 chr3L_3280001 RAL-805 823 chr3L 3285640 3285663 chr3L 3285723 3285746 11 82 2.0 3.5 2.8 2.9 106 chr3L 3285640 intron CG12017 + chr3L 3285693 intron CG12017 + chr3L 3285746 intron CG12017 + chr3L_11_3285001 chr3L_3285001 RAL-805 824 chr3L 3436288 3436306 chr3L 3436367 3436385 7 79 3.5 4.0 3.8 1.5 97 chr3L 3436288 intron eIF5B - chr3L 3436336 intron eIF5B - chr3L 3436385 intron eIF5B - chr3L_7_3435001 chr3L_3435001 RAL-805 825 chr3L 3475078 3475113 chr3L 3475521 3475557 jockey 6 444 1.0 1.5 1.2 2.7 479 chr3L 3475078 intron CG42324 + chr3L 3475318 intron CG42324 + chr3L 3475557 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-805 826 chr3L 3484379 3484405 chr3L 3484555 3484579 10 175 0.0 4.0 2.0 3.3 200 chr3L 3484379 intron,exon CG42324 +,CG43074 - chr3L 3484479 intron,exon CG42324 +,CG43074 - chr3L 3484579 intron,exon CG42324 +,CG43074 - chr3L_10_3480001 chr3L_3480001 RAL-805 827 chr3L 3573168 3573193 chr3L 3573251 3573276 8 83 1.5 2.5 2.0 2.7 108 chr3L 3573168 intron Eip63E + chr3L 3573222 intron Eip63E + chr3L 3573276 intron Eip63E + chr3L_8_3570001 chr3L_3570001 RAL-805 828 chr3L 3585596 3585615 chr3L 3585688 3585707 4 92 0.0 2.0 1.0 2.0 111 chr3L 3585596 intron Eip63E + chr3L 3585652 intron Eip63E + chr3L 3585707 intron Eip63E + chr3L_4_3585001 chr3L_3585001 RAL-805 829 chr3L 3601299 3601324 chr3L 3606610 3606634 copia 6 5310 2.5 2.0 2.2 1.9 5335 chr3L 3601299 intron Eip63E + chr3L 3603966 intron Eip63E + chr3L 3606634 intron Eip63E + chr3L_6_3600001 chr3L_3600001 RAL-805 830 chr3L 3619405 3619430 chr3L 3619497 3619524 6 94 0.5 1.0 0.8 3.3 119 chr3L 3619405 intergenic not near genes chr3L 3619464 intergenic not near genes chr3L 3619524 intergenic not near genes chr3L_6_3615001 chr3L_3615001 RAL-805 831 chr3L 3627236 3627262 chr3L 3627341 3627367 5 105 1.5 1.0 1.2 2.3 131 chr3L 3627236 intron dar1 + chr3L 3627302 intron dar1 + chr3L 3627367 intron dar1 + chr3L_5_3625001 chr3L_3625001 RAL-805 832 chr3L 3792024 3792042 chr3L 3792113 3792131 7 89 0.0 3.5 1.8 2.5 107 chr3L 3792024 intron CG32264 - chr3L 3792078 intron CG32264 - chr3L 3792131 intron CG32264 - chr3L_7_3790001 chr3L_3790001 RAL-805 833 chr3L 3815057 3815082 chr3L 3815138 3815163 10 81 3.5 0.5 2.0 3.3 106 chr3L 3815057 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815110 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815163 intron,intron Scsalpha +,CR43932 - chr3L_10_3815001 chr3L_3815001 RAL-805 834 chr3L 3827800 3827828 chr3L 3827882 3827910 9 81 3.0 5.0 4.0 1.8 110 chr3L 3827800 intron,intron enc +,Rdh + chr3L 3827855 intron,intron enc +,Rdh + chr3L 3827910 intron,intron enc +,Rdh + chr3L_9_3825001 chr3L_3825001 RAL-805 835 chr3L 3833740 3833770 chr3L 3833981 3834011 pogo 4 241 1.0 1.5 1.2 1.8 271 chr3L 3833740 intron enc + chr3L 3833876 intron enc + chr3L 3834011 intron enc + chr3L_4_3830001 chr3L_3830001 RAL-805 836 chr3L 3848076 3848099 chr3L 3848152 3848175 4 75 1.0 1.5 1.2 1.8 99 chr3L 3848076 intron Awh + chr3L 3848126 intron Awh + chr3L 3848175 intron Awh + chr3L_4_3845001 chr3L_3845001 RAL-805 837 chr3L 3890976 3890994 chr3L 3891057 3891075 6 81 1.5 0.0 0.8 3.3 99 chr3L 3890976 intergenic not near genes chr3L 3891026 intergenic not near genes chr3L 3891075 intergenic not near genes chr3L_6_3890001 chr3L_3890001 RAL-805 838 chr3L 3921404 3921423 chr3L 3921668 3921687 5 263 2.0 2.5 2.2 1.6 283 chr3L 3921404 intron Eip63F-1 - chr3L 3921546 intron Eip63F-1 - chr3L 3921687 intron Eip63F-1 - chr3L_5_3920001 chr3L_3920001 RAL-805 839 chr3L 3935830 3935845 chr3L 3935908 3935923 5 77 1.0 2.5 1.8 1.8 93 chr3L 3935830 5` UTR Eip63F-2 + chr3L 3935876 5` UTR Eip63F-2 + chr3L 3935923 5` UTR Eip63F-2 + chr3L_5_3935001 chr3L_3935001 RAL-805 840 chr3L 4052254 4052278 chr3L 4052327 4052353 10 76 2.0 2.0 2.0 3.3 99 chr3L 4052254 intron CG1136 + chr3L 4052304 intron CG1136 + chr3L 4052353 intron CG1136 + chr3L_10_4050001 chr3L_4050001 RAL-805 841 chr3L 4195137 4195171 chr3L 4195241 4195271 8 101 3.0 2.5 2.8 2.1 134 chr3L 4195137 exon CG43367 + chr3L 4195204 intron CG43367 + chr3L 4195271 intron CG43367 + chr3L_8_4195001 chr3L_4195001 RAL-805 842 chr3L 4311792 4311818 chr3L 4311892 4311903 6 99 1.0 2.0 1.5 2.4 111 chr3L 4311792 intergenic not near genes chr3L 4311848 intergenic not near genes chr3L 4311903 intergenic not near genes chr3L_6_4310001 chr3L_4310001 RAL-805 843 chr3L 4328741 4328754 chr3L 4336239 4336251 412 6 7497 4.0 5.5 4.8 1.0 7510 chr3L 4328741 intron Cip4 - chr3L 4332496 intron Cip4 - chr3L 4336251 intron Cip4 - chr3L_6_4330001 chr3L_4330001 RAL-805 844 chr3L 4364205 4364233 chr3L 4364294 4364322 7 89 1.0 2.0 1.5 2.8 117 chr3L 4364205 intergenic Cip4 -,mRpS6 + chr3L 4364264 intergenic Cip4 -,mRpS6 + chr3L 4364322 intergenic Cip4 -,mRpS6 + chr3L_7_4360001 chr3L_4360001 RAL-805 845 chr3L 4414661 4414678 chr3L 4414759 4414775 7 97 3.0 4.5 3.8 1.5 114 chr3L 4414661 intron DOR + chr3L 4414718 intron DOR + chr3L 4414775 intron DOR + chr3L_7_4410001 chr3L_4410001 RAL-805 846 chr3L 4491385 4491413 chr3L 4491478 4491506 4 93 0.5 0.0 0.2 3.3 121 chr3L 4491385 intergenic CG13722 - chr3L 4491446 intergenic CG13722 - chr3L 4491506 intergenic not near genes chr3L_4_4490001 chr3L_4490001 RAL-805 847 chr3L 4519419 4519454 chr3L 4519496 4519530 17 77 3.5 1.0 2.2 5.3 111 chr3L 4519419 intron Tie - chr3L 4519474 intron Tie - chr3L 4519530 intron Tie - chr3L_17_4515001 chr3L_4515001 RAL-805 848 chr3L 4597212 4597243 chr3L 4597294 4597325 13 81 3.0 5.5 4.2 2.5 113 chr3L 4597212 intron Src64B - chr3L 4597268 intron Src64B - chr3L 4597325 intron Src64B - chr3L_13_4595001 chr3L_4595001 RAL-805 849 chr3L 4604865 4604900 chr3L 4604976 4605010 12 110 3.0 4.5 3.8 2.5 145 chr3L 4604865 intron Src64B - chr3L 4604938 intron Src64B - chr3L 4605010 intron Src64B - chr3L_12_4600001 chr3L_4600001 RAL-805 850 chr3L 4699300 4699314 chr3L 4699380 4699394 4 80 1.0 2.5 1.8 1.4 94 chr3L 4699300 intron RhoGEF64C + chr3L 4699347 intron RhoGEF64C + chr3L 4699394 intron RhoGEF64C + chr3L_4_4695001 chr3L_4695001 RAL-805 851 chr3L 4837887 4837925 chr3L 4837966 4837984 7 76 2.0 4.0 3.0 1.8 97 chr3L 4837887 3` UTR CG13707 - chr3L 4837936 3` UTR CG13707 - chr3L 4837984 3` UTR CG13707 - chr3L_7_4835001 chr3L_4835001 RAL-805 852 chr3L 4839549 4839579 chr3L 4839626 4839655 10 76 1.5 3.5 2.5 2.9 106 chr3L 4839549 intron CG13707 - chr3L 4839602 intron CG13707 - chr3L 4839655 intron CG13707 - chr3L_10_4835001 chr3L_4835001 RAL-805 853 chr3L 4901128 4901157 chr3L 4907317 4907347 diver 11 6190 2.0 2.0 2.0 3.7 6219 chr3L 4901128 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907347 intergenic not near genes chr3L_11_4900001 chr3L_4900001 RAL-805 854 chr3L 4959632 4959671 chr3L 4960083 4960112 4 443 0.0 5.0 2.5 1.1 480 chr3L 4959632 intron Con - chr3L 4959872 intron Con - chr3L 4960112 intron Con - chr3L_4_4955001 chr3L_4955001 RAL-805 855 chr3L 4989179 4989191 chr3L 4989269 4989281 4 90 0.0 1.5 0.8 2.2 102 chr3L 4989179 intron Con - chr3L 4989230 intron Con - chr3L 4989281 intron Con - chr3L_4_4985001 chr3L_4985001 RAL-805 856 chr3L 5034158 5034188 chr3L 5043310 5043340 roo 7 9152 4.0 1.5 2.8 1.8 9182 chr3L 5034158 intron Con - chr3L 5038749 intron Con - chr3L 5043340 intron Con - chr3L_7_5035001 chr3L_5035001 RAL-805 857 chr3L 5045458 5045487 chr3L 5050239 5050268 Doc 8 4780 2.0 3.5 2.8 2.1 4810 chr3L 5045458 intron Con - chr3L 5047863 intron Con - chr3L 5050268 intron Con - chr3L_8_5045001 chr3L_5045001 RAL-805 858 chr3L 5104482 5104508 chr3L 5124616 5124642 6 20133 2.5 4.0 3.2 1.4 20160 chr3L 5104482 intergenic not near genes chr3L 5114562 intergenic not near genes chr3L 5124642 intergenic not near genes chr3L_6_5110001 chr3L_5110001 RAL-805 859 chr3L 5159023 5159052 chr3L 5159099 5159129 9 77 4.5 2.5 3.5 2.0 106 chr3L 5159023 3` UTR shep - chr3L 5159076 3` UTR shep - chr3L 5159129 3` UTR shep - chr3L_9_5155001 chr3L_5155001 RAL-805 860 chr3L 5250079 5250109 chr3L 5250157 5250187 5 78 0.0 1.0 0.5 3.3 108 chr3L 5250079 intron shep - chr3L 5250133 intron shep - chr3L 5250187 intron shep - chr3L_5_5250001 chr3L_5250001 RAL-805 861 chr3L 5388201 5388227 chr3L 5388525 5388551 10 324 5.0 0.5 2.8 2.6 350 chr3L 5388201 intergenic not near genes chr3L 5388376 intergenic not near genes chr3L 5388551 intergenic not near genes chr3L_10_5385001 chr3L_5385001 RAL-805 862 chr3L 5396467 5396492 chr3L 5396554 5396579 4 87 1.0 0.5 0.8 2.2 112 chr3L 5396467 intergenic not near genes chr3L 5396523 intergenic not near genes chr3L 5396579 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-805 863 chr3L 5498416 5498425 chr3L 5498493 5498502 5 77 0.5 3.0 1.8 1.8 86 chr3L 5498416 exon blanks - chr3L 5498459 exon blanks - chr3L 5498502 exon blanks - chr3L_5_5495001 chr3L_5495001 RAL-805 864 chr3L 5537726 5537748 chr3L 5538068 5538090 jockey 4 338 1.5 3.5 2.5 1.1 364 chr3L 5537726 intergenic not near genes chr3L 5537908 intergenic not near genes chr3L 5538090 intergenic CG10625 - chr3L_4_5535001 chr3L_5535001 RAL-805 865 chr3L 5667627 5667639 chr3L 5667707 5667719 6 80 5.0 0.0 2.5 1.7 92 chr3L 5667627 intron sif + chr3L 5667673 intron sif + chr3L 5667719 intron sif + chr3L_6_5665001 chr3L_5665001 RAL-805 866 chr3L 5908077 5908098 chr3L 5908157 5908178 6 80 1.5 1.0 1.2 2.7 101 chr3L 5908077 intron CG13288 + chr3L 5908128 intron CG13288 + chr3L 5908178 intron CG13288 + chr3L_6_5905001 chr3L_5905001 RAL-805 867 chr3L 5910033 5910056 chr3L 5910274 5910297 pogo 9 241 2.5 2.5 2.5 2.6 264 chr3L 5910033 intron CG13288 + chr3L 5910165 intron CG13288 + chr3L 5910297 intron CG13288 + chr3L_9_5910001 chr3L_5910001 RAL-805 868 chr3L 5926329 5926349 chr3L 5926505 5926539 BS 8 184 2.0 2.5 2.2 2.5 210 chr3L 5926329 intron Vap-33B + chr3L 5926434 intron Vap-33B + chr3L 5926539 intron Vap-33B + chr3L_8_5925001 chr3L_5925001 RAL-805 869 chr3L 5998447 5998458 chr3L 5998530 5998541 4 82 2.0 5.0 3.5 0.9 94 chr3L 5998447 intron PVRAP + chr3L 5998494 intron PVRAP + chr3L 5998541 intron PVRAP + chr3L_4_5995001 chr3L_5995001 RAL-805 870 chr3L 6001687 6001715 chr3L 6004387 6004415 jockey 4 2700 2.0 1.0 1.5 1.6 2728 chr3L 6001687 intron PVRAP + chr3L 6003051 intron PVRAP + chr3L 6004415 intron PVRAP + chr3L_4_6000001 chr3L_6000001 RAL-805 871 chr3L 6033599 6033631 chr3L 6033746 6033778 9 146 3.0 2.0 2.5 2.6 179 chr3L 6033599 3` UTR CG10477 - chr3L 6033688 3` UTR CG10477 - chr3L 6033778 exon CG10477 - chr3L_9_6030001 chr3L_6030001 RAL-805 872 chr3L 6038863 6038895 chr3L 6038947 6038979 15 82 2.5 5.5 4.0 3.0 116 chr3L 6038863 intergenic Jon65Aiv + chr3L 6038921 intergenic Jon65Aiv + chr3L 6038979 intergenic Jon65Aiv + chr3L_15_6035001 chr3L_6035001 RAL-805 873 chr3L 6040373 6040393 chr3L 6042729 6042749 Doc 9 2356 3.0 5.5 4.2 1.7 2376 chr3L 6040373 intergenic Jon65Aiv + chr3L 6041561 intergenic not near genes chr3L 6042749 intergenic not near genes chr3L_9_6040001 chr3L_6040001 RAL-805 874 chr3L 6052140 6052149 chr3L 6052225 6052235 5 86 0.0 2.5 1.2 2.3 95 chr3L 6052140 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052188 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052235 intergenic Jon65Aii + chr3L_5_6050001 chr3L_6050001 RAL-805 875 chr3L 6063942 6063965 chr3L 6064025 6064049 13 83 4.5 2.0 3.2 3.1 107 chr3L 6063942 intergenic not near genes chr3L 6063996 intergenic not near genes chr3L 6064049 intergenic not near genes chr3L_13_6060001 chr3L_6060001 RAL-805 876 chr3L 6102952 6102961 chr3L 6103035 6103044 4 83 1.5 2.5 2.0 1.3 92 chr3L 6102952 intron Ets65A + chr3L 6102998 intron Ets65A + chr3L 6103044 intron Ets65A + chr3L_4_6100001 chr3L_6100001 RAL-805 877 chr3L 6220916 6220946 chr3L 6230068 6230098 roo 11 9152 7.0 6.5 6.8 1.4 9182 chr3L 6220916 5` UTR pncr008:3L + chr3L 6225507 intergenic not near genes chr3L 6230098 intergenic not near genes chr3L_11_6225001 chr3L_6225001 RAL-805 878 chr3L 6256088 6256105 chr3L 6256167 6256188 6 81 3.0 2.0 2.5 1.7 100 chr3L 6256088 intron Best2 - chr3L 6256138 intron Best2 - chr3L 6256188 intron Best2 - chr3L_6_6255001 chr3L_6255001 RAL-805 879 chr3L 6335022 6335037 chr3L 6335493 6335508 297 4 471 1.0 8.5 4.8 0.7 486 chr3L 6335022 intron CG13300 - chr3L 6335265 intron CG13300 - chr3L 6335508 intron CG13300 - chr3L_4_6335001 chr3L_6335001 RAL-805 880 chr3L 6372439 6372462 chr3L 6372590 6372613 6 151 1.5 2.5 2.0 2.0 174 chr3L 6372439 intergenic not near genes chr3L 6372526 intergenic not near genes chr3L 6372613 intergenic not near genes chr3L_6_6370001 chr3L_6370001 RAL-805 881 chr3L 6442148 6442184 chr3L 6442362 6442398 10 214 27.5 27.5 27.5 0.4 250 chr3L 6442148 intron CG42747 + chr3L 6442273 intron CG42747 + chr3L 6442398 intron CG42747 + chr3L_10_6440001 chr3L_6440001 RAL-805 882 chr3L 6704563 6704578 chr3L 6704641 6704647 6 73 2.5 2.5 2.5 1.7 84 chr3L 6704563 intergenic CG8519 + chr3L 6704605 intergenic CG8519 + chr3L 6704647 intergenic CG8519 + chr3L_6_6700001 chr3L_6700001 RAL-805 883 chr3L 6855920 6855944 chr3L 6860703 6860728 Doc 4 4784 3.0 1.0 2.0 1.3 4808 chr3L 6855920 intergenic not near genes chr3L 6858324 intergenic not near genes chr3L 6860728 intergenic not near genes chr3L_4_6855001 chr3L_6855001 RAL-805 884 chr3L 6887524 6887548 chr3L 6895016 6895040 roo 8 7492 3.5 1.0 2.2 2.5 7516 chr3L 6887524 intergenic not near genes chr3L 6891282 intergenic not near genes chr3L 6895040 intergenic not near genes chr3L_8_6890001 chr3L_6890001 RAL-805 885 chr3L 6934338 6934364 chr3L 6934449 6934475 7 111 1.5 3.0 2.2 2.2 137 chr3L 6934338 exon CG14820 + chr3L 6934406 intron CG14820 + chr3L 6934475 intron CG14820 + chr3L_7_6930001 chr3L_6930001 RAL-805 886 chr3L 6937229 6937243 chr3L 6937336 6937357 6 110 3.0 3.0 3.0 1.5 128 chr3L 6937229 5` UTR CR45414 + chr3L 6937293 5` UTR CR45414 + chr3L 6937357 5` UTR CR45414 + chr3L_6_6935001 chr3L_6935001 RAL-805 887 chr3L 6994887 6994917 chr3L 6995498 6995528 BS 4 611 1.0 3.5 2.2 1.2 641 chr3L 6994887 intergenic bin + chr3L 6995208 intergenic not near genes chr3L 6995528 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-805 888 chr3L 7033173 7033203 chr3L 7033253 7033283 11 79 4.5 2.0 3.2 2.6 110 chr3L 7033173 intron Mp + chr3L 7033228 intron Mp + chr3L 7033283 intron Mp + chr3L_11_7030001 chr3L_7030001 RAL-805 889 chr3L 7057740 7057759 chr3L 7058544 7058563 4 804 3.0 1.5 2.2 1.2 823 chr3L 7057740 intergenic not near genes chr3L 7058152 intergenic not near genes chr3L 7058563 intergenic CG8641 - chr3L_4_7055001 chr3L_7055001 RAL-805 890 chr3L 7090905 7090920 chr3L 7090989 7091004 6 84 2.5 6.0 4.2 1.2 99 chr3L 7090905 intergenic not near genes chr3L 7090954 intergenic not near genes chr3L 7091004 intergenic not near genes chr3L_6_7090001 chr3L_7090001 RAL-805 891 chr3L 7150881 7150902 chr3L 7150955 7150978 9 76 1.0 1.0 1.0 4.5 97 chr3L 7150881 intron corn - chr3L 7150930 intron corn - chr3L 7150978 intron corn - chr3L_9_7150001 chr3L_7150001 RAL-805 892 chr3L 7276154 7276185 chr3L 7276236 7276267 9 82 3.0 4.5 3.8 1.9 113 chr3L 7276154 intron unc-13-4A - chr3L 7276210 intron unc-13-4A - chr3L 7276267 intron unc-13-4A - chr3L_9_7275001 chr3L_7275001 RAL-805 893 chr3L 7285451 7285477 chr3L 7285529 7285555 9 78 4.5 2.5 3.5 2.0 104 chr3L 7285451 intron unc-13-4A - chr3L 7285503 intron unc-13-4A - chr3L 7285555 intron unc-13-4A - chr3L_9_7285001 chr3L_7285001 RAL-805 894 chr3L 7311588 7311620 chr3L 7311678 7311711 7 87 1.0 3.0 2.0 2.3 123 chr3L 7311588 intron unc-13-4A - chr3L 7311650 intron unc-13-4A - chr3L 7311711 intron unc-13-4A - chr3L_7_7310001 chr3L_7310001 RAL-805 895 chr3L 7450699 7450715 chr3L 7450772 7450798 6 81 1.5 1.0 1.2 2.7 99 chr3L 7450699 intron CG42458 + chr3L 7450748 intron CG42458 + chr3L 7450798 intron CG42458 + chr3L_6_7450001 chr3L_7450001 RAL-805 896 chr3L 7462958 7462987 chr3L 7463035 7463066 5 78 0.0 0.5 0.2 4.2 108 chr3L 7462958 intergenic not near genes chr3L 7463012 intergenic not near genes chr3L 7463066 intergenic not near genes chr3L_5_7460001 chr3L_7460001 RAL-805 897 chr3L 7464858 7464881 chr3L 7464935 7464944 5 69 2.0 3.5 2.8 1.3 86 chr3L 7464858 intergenic not near genes chr3L 7464901 intergenic not near genes chr3L 7464944 intergenic not near genes chr3L_5_7460001 chr3L_7460001 RAL-805 898 chr3L 7480055 7480073 chr3L 7480143 7480162 5 89 0.0 1.0 0.5 3.3 107 chr3L 7480055 intergenic not near genes chr3L 7480108 intergenic not near genes chr3L 7480162 intergenic not near genes chr3L_5_7480001 chr3L_7480001 RAL-805 899 chr3L 7505416 7505437 chr3L 7505492 7505513 5 76 1.0 1.0 1.0 2.5 97 chr3L 7505416 intergenic CG7548 - chr3L 7505464 intergenic CG7548 - chr3L 7505513 intergenic CG7548 - chr3L_5_7505001 chr3L_7505001 RAL-805 900 chr3L 7576213 7576245 chr3L 7576298 7576332 14 87 3.5 3.5 3.5 3.1 119 chr3L 7576213 intergenic not near genes chr3L 7576272 intergenic not near genes chr3L 7576332 intergenic not near genes chr3L_14_7575001 chr3L_7575001 RAL-805 901 chr3L 7749470 7749471 chr3L 11777678 11777678 6 4028208 17.0 15.5 16.2 0.3 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_9760001 chr3L_9760001 RAL-805 902 chr3L 7793468 7793480 chr3L 7793723 7793735 5 254 7.5 0.0 3.8 1.0 267 chr3L 7793468 intron CG32369 - chr3L 7793602 intron CG32369 - chr3L 7793735 intron CG32369 - chr3L_5_7790001 chr3L_7790001 RAL-805 903 chr3L 7793720 7793744 chr3L 7800772 7800796 297 10 7052 0.0 5.0 2.5 2.9 7076 chr3L 7793720 intron CG32369 - chr3L 7797258 intron CG32369 - chr3L 7800796 intron CG32369 - chr3L_10_7795001 chr3L_7795001 RAL-805 904 chr3L 7860669 7860682 chr3L 7860761 7860774 5 89 1.0 3.5 2.2 1.6 105 chr3L 7860669 intron Pdp1 - chr3L 7860722 intron Pdp1 - chr3L 7860774 intron Pdp1 - chr3L_5_7860001 chr3L_7860001 RAL-805 905 chr3L 7866218 7866232 chr3L 7866805 7866819 7 586 2.0 3.5 2.8 1.8 601 chr3L 7866218 intron Pdp1 - chr3L 7866518 intron Pdp1 - chr3L 7866819 intron Pdp1 - chr3L_7_7865001 chr3L_7865001 RAL-805 906 chr3L 7886514 7886547 chr3L 7889032 7889065 Stalker4 10 2518 0.0 3.5 1.8 3.6 2551 chr3L 7886514 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889065 intron CG32365 + chr3L_10_7885001 chr3L_7885001 RAL-805 907 chr3L 7985361 7985395 chr3L 7987689 7987723 NOF 20 2328 5.0 4.0 4.5 3.6 2362 chr3L 7985361 intron nmo + chr3L 7986542 intron nmo + chr3L 7987723 intron nmo + chr3L_20_7985001 chr3L_7985001 RAL-805 908 chr3L 8035705 8035734 chr3L 8035914 8035928 13 208 3.0 3.5 3.2 3.1 223 chr3L 8035705 intron nmo + chr3L 8035816 intron nmo + chr3L 8035928 intron nmo + chr3L_13_8035001 chr3L_8035001 RAL-805 909 chr3L 8043983 8044001 chr3L 8048012 8048030 9 4029 15.0 15.0 15.0 0.6 4047 chr3L 8043983 intron nmo + chr3L 8046006 intron nmo + chr3L 8048030 intron nmo + chr3L_9_8045001 chr3L_8045001 RAL-805 910 chr3L 8165966 8165995 chr3L 8166050 8166078 6 84 4.0 1.0 2.5 1.7 112 chr3L 8165966 intergenic CG13675 - chr3L 8166022 intergenic not near genes chr3L 8166078 intergenic not near genes chr3L_6_8165001 chr3L_8165001 RAL-805 911 chr3L 8178880 8178894 chr3L 8179768 8179774 4 885 8.5 0.0 4.2 0.8 894 chr3L 8178880 intron mthl7 - chr3L 8179327 exon mthl7 - chr3L 8179774 intron mthl7 - chr3L_4_8175001 chr3L_8175001 RAL-805 912 chr3L 8208126 8208154 chr3L 8208258 8208286 6 131 3.5 1.5 2.5 1.7 160 chr3L 8208126 intergenic not near genes chr3L 8208206 intergenic not near genes chr3L 8208286 intergenic not near genes chr3L_6_8205001 chr3L_8205001 RAL-805 913 chr3L 8216864 8216891 chr3L 8216940 8216966 9 76 1.0 2.5 1.8 3.2 102 chr3L 8216864 intergenic not near genes chr3L 8216915 intergenic not near genes chr3L 8216966 intergenic not near genes chr3L_9_8215001 chr3L_8215001 RAL-805 914 chr3L 8226728 8226745 chr3L 8226827 8226844 4 99 0.5 0.0 0.2 3.3 116 chr3L 8226728 intergenic not near genes chr3L 8226786 intergenic not near genes chr3L 8226844 intergenic not near genes chr3L_4_8225001 chr3L_8225001 RAL-805 915 chr3L 8371735 8371756 chr3L 8371821 8371841 8 86 0.0 3.0 1.5 3.2 106 chr3L 8371735 intergenic not near genes chr3L 8371788 intergenic not near genes chr3L 8371841 intergenic not near genes chr3L_8_8370001 chr3L_8370001 RAL-805 916 chr3L 8395835 8395868 chr3L 8395931 8395960 10 94 2.0 3.0 2.5 2.9 125 chr3L 8395835 intergenic CG7120 + chr3L 8395898 intergenic CG7120 + chr3L 8395960 intergenic CG7120 + chr3L_10_8395001 chr3L_8395001 RAL-805 917 chr3L 8456479 8456484 chr3L 8456573 8456575 4 94 7.5 5.0 6.2 0.6 96 chr3L 8456479 intron Gug + chr3L 8456527 intron Gug + chr3L 8456575 intron Gug + chr3L_4_8455001 chr3L_8455001 RAL-805 918 chr3L 8481789 8481806 chr3L 8490934 8490965 roo 5 9149 1.0 2.5 1.8 1.8 9176 chr3L 8481789 intron CG43163 - chr3L 8486377 intron CG43163 - chr3L 8490965 intron CG43163 - chr3L_5_8485001 chr3L_8485001 RAL-805 919 chr3L 8498301 8498327 chr3L 8505768 8505794 blood 7 7467 2.5 4.0 3.2 1.7 7493 chr3L 8498301 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505794 intron CG43163 - chr3L_7_8500001 chr3L_8500001 RAL-805 920 chr3L 8540711 8540742 chr3L 8540788 8540819 12 77 2.5 3.5 3.0 3.0 108 chr3L 8540711 intergenic not near genes chr3L 8540765 intergenic not near genes chr3L 8540819 intergenic not near genes chr3L_12_8540001 chr3L_8540001 RAL-805 921 chr3L 8706503 8706523 chr3L 8706714 8706734 7 211 4.0 0.5 2.2 2.2 231 chr3L 8706503 intergenic not near genes chr3L 8706618 intergenic not near genes chr3L 8706734 intergenic not near genes chr3L_7_8705001 chr3L_8705001 RAL-805 922 chr3L 8791272 8791289 chr3L 8796692 8796709 I-element 6 5420 4.0 0.0 2.0 2.0 5437 chr3L 8791272 exon Fhos + chr3L 8793990 intron Fhos + chr3L 8796709 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-805 923 chr3L 8839737 8839747 chr3L 8839817 8839827 8 80 1.0 2.0 1.5 3.2 90 chr3L 8839737 intron dally + chr3L 8839782 intron dally + chr3L 8839827 intron dally + chr3L_8_8835001 chr3L_8835001 RAL-805 924 chr3L 8849207 8849244 chr3L 8849287 8849324 8 80 2.5 0.5 1.5 3.2 117 chr3L 8849207 intron dally + chr3L 8849266 intron dally + chr3L 8849324 intron dally + chr3L_8_8845001 chr3L_8845001 RAL-805 925 chr3L 8928269 8928279 chr3L 8928345 8928355 4 76 2.5 1.0 1.8 1.4 86 chr3L 8928269 intron Tsp66E + chr3L 8928312 intron Tsp66E + chr3L 8928355 intron Tsp66E + chr3L_4_8925001 chr3L_8925001 RAL-805 926 chr3L 9003952 9003975 chr3L 9004037 9004060 9 85 2.0 1.0 1.5 3.6 108 chr3L 9003952 intergenic not near genes chr3L 9004006 intergenic not near genes chr3L 9004060 intergenic not near genes chr3L_9_9000001 chr3L_9000001 RAL-805 927 chr3L 9076932 9076960 chr3L 9084492 9084520 412 14 7558 5.5 4.5 5.0 2.3 7588 chr3L 9076932 exon Tequila + chr3L 9080726 intron Tequila + chr3L 9084520 exon Tequila + chr3L_14_9080001 chr3L_9080001 RAL-805 928 chr3L 9130557 9130576 chr3L 9134318 9134337 412 5 3761 3.5 2.0 2.8 1.3 3780 chr3L 9130557 intergenic bol - chr3L 9132447 intergenic not near genes chr3L 9134337 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 RAL-805 929 chr3L 9164699 9164724 chr3L 9166165 9166191 hobo 8 1466 3.0 2.0 2.5 2.3 1492 chr3L 9164699 intron Rdl - chr3L 9165445 intron Rdl - chr3L 9166191 intron Rdl - chr3L_8_9165001 chr3L_9165001 RAL-805 930 chr3L 9218090 9218104 chr3L 9218175 9218189 6 85 0.0 3.0 1.5 2.4 99 chr3L 9218090 intergenic not near genes chr3L 9218140 intergenic not near genes chr3L 9218189 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-805 931 chr3L 9219249 9219270 chr3L 9219914 9219930 jockey 9 667 5.0 1.5 3.2 2.1 681 chr3L 9219249 intergenic not near genes chr3L 9219590 intergenic not near genes chr3L 9219930 intergenic not near genes chr3L_9_9215001 chr3L_9215001 RAL-805 932 chr3L 9232859 9232872 chr3L 9232935 9232948 4 76 2.0 1.5 1.8 1.4 89 chr3L 9232859 intergenic not near genes chr3L 9232904 intergenic not near genes chr3L 9232948 intergenic not near genes chr3L_4_9230001 chr3L_9230001 RAL-805 933 chr3L 9233464 9233482 chr3L 9233553 9233570 5 89 0.5 0.0 0.2 4.2 106 chr3L 9233464 intergenic not near genes chr3L 9233517 intergenic not near genes chr3L 9233570 intergenic not near genes chr3L_5_9230001 chr3L_9230001 RAL-805 934 chr3L 9234532 9234563 chr3L 9234739 9234768 17 209 2.5 2.5 2.5 4.9 236 chr3L 9234532 intergenic not near genes chr3L 9234650 intergenic CG4483 - chr3L 9234768 intergenic CG4483 - chr3L_17_9230001 chr3L_9230001 RAL-805 935 chr3L 9255406 9255425 chr3L 9255507 9255527 4 102 1.5 0.5 1.0 2.0 121 chr3L 9255406 intron GluRIB + chr3L 9255466 intron GluRIB + chr3L 9255527 intron GluRIB + chr3L_4_9255001 chr3L_9255001 RAL-805 936 chr3L 9313027 9313027 chr3L 11777678 11777678 4 2464651 8.0 15.5 11.8 0.3 2464651 chr3L 9313027 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-805 937 chr3L 9320417 9320428 chr3L 9320498 9320509 5 80 3.0 4.5 3.8 1.0 92 chr3L 9320417 intergenic not near genes chr3L 9320463 intergenic not near genes chr3L 9320509 intergenic not near genes chr3L_5_9320001 chr3L_9320001 RAL-805 938 chr3L 9348468 9348487 chr3L 9348969 9348989 5 501 1.5 0.0 0.8 2.8 521 chr3L 9348468 intergenic PGRP-LC + chr3L 9348728 intergenic PGRP-LC + chr3L 9348989 intergenic not near genes chr3L_5_9345001 chr3L_9345001 RAL-805 939 chr3L 9359586 9359623 chr3L 9359677 9359714 6 91 1.5 1.0 1.2 2.7 128 chr3L 9359586 3` UTR CG32039 + chr3L 9359650 3` UTR CG32039 + chr3L 9359714 3` UTR CG32039 + chr3L_6_9355001 chr3L_9355001 RAL-805 940 chr3L 9443517 9443542 chr3L 9445298 9445323 S-element 8 1780 4.0 3.5 3.8 1.7 1806 chr3L 9443517 intron CG33926 + chr3L 9444420 intron CG33926 + chr3L 9445323 intron CG33926 + chr3L_8_9440001 chr3L_9440001 RAL-805 941 chr3L 9467018 9467051 chr3L 9467109 9467134 6 90 0.5 2.5 1.5 2.4 116 chr3L 9467018 intron CG44838 + chr3L 9467076 intron CG44838 + chr3L 9467134 intron CG44838 + chr3L_6_9465001 chr3L_9465001 RAL-805 942 chr3L 9498201 9498231 chr3L 9498278 9498307 4 76 1.5 1.5 1.5 1.6 106 chr3L 9498201 intron path - chr3L 9498254 intron path - chr3L 9498307 intron path - chr3L_4_9495001 chr3L_9495001 RAL-805 943 chr3L 9510911 9510958 chr3L 9511004 9511030 7 84 0.0 1.0 0.5 4.7 119 chr3L 9510911 intron RpS9 - chr3L 9510970 intron RpS9 - chr3L 9511030 intron RpS9 - chr3L_7_9510001 chr3L_9510001 RAL-805 944 chr3L 9524032 9524066 chr3L 9524112 9524146 5 80 0.5 4.0 2.2 1.6 114 chr3L 9524032 intron CG33700 - chr3L 9524089 intron CG33700 - chr3L 9524146 intron CG33700 - chr3L_5_9520001 chr3L_9520001 RAL-805 945 chr3L 9575904 9575942 chr3L 9580984 9581022 jockey 15 5080 2.0 3.5 2.8 3.9 5118 chr3L 9575904 intron CG42673 + chr3L 9578463 intron CG42673 + chr3L 9581022 intron CG42673 + chr3L_15_9575001 chr3L_9575001 RAL-805 946 chr3L 9637853 9637887 chr3L 9637935 9637969 12 82 3.5 0.5 2.0 4.0 116 chr3L 9637853 intron fry - chr3L 9637911 intron fry - chr3L 9637969 intron fry - chr3L_12_9635001 chr3L_9635001 RAL-805 947 chr3L 9639048 9639061 chr3L 9639133 9639145 4 85 0.0 5.5 2.8 1.1 97 chr3L 9639048 intron fry - chr3L 9639096 intron fry - chr3L 9639145 intron fry - chr3L_4_9635001 chr3L_9635001 RAL-805 948 chr3L 9741622 9741653 chr3L 9741714 9741745 5 92 0.0 2.0 1.0 2.5 123 chr3L 9741622 intron,intron CG42268 -,CR44348 + chr3L 9741684 intron,intron CG42268 -,CR44348 + chr3L 9741745 intron,intron CG42268 -,CR44348 + chr3L_5_9740001 chr3L_9740001 RAL-805 949 chr3L 9767659 9767695 chr3L 9767773 9767809 7 114 4.5 2.5 3.5 1.6 150 chr3L 9767659 intron CG8177 + chr3L 9767734 intron CG8177 + chr3L 9767809 intron CG8177 + chr3L_7_9765001 chr3L_9765001 RAL-805 950 chr3L 9918884 9918908 chr3L 9918979 9919003 9 94 5.0 4.0 4.5 1.6 119 chr3L 9918884 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919003 intron CG34356 + chr3L_9_9915001 chr3L_9915001 RAL-805 951 chr3L 9929680 9929701 chr3L 9938461 9938482 roo 9 8781 2.5 6.5 4.5 1.6 8802 chr3L 9929680 intron CG34356 + chr3L 9934081 intron CG34356 + chr3L 9938482 intron CG34356 + chr3L_9_9930001 chr3L_9930001 RAL-805 952 chr3L 9947031 9947063 chr3L 9947141 9947173 11 108 3.0 3.0 3.0 2.8 142 chr3L 9947031 intron CG34356 + chr3L 9947102 intron CG34356 + chr3L 9947173 intron CG34356 + chr3L_11_9945001 chr3L_9945001 RAL-805 953 chr3L 10003150 10003181 chr3L 10003247 10003278 11 97 2.5 2.5 2.5 3.1 128 chr3L 10003150 intron dpr6 + chr3L 10003214 intron dpr6 + chr3L 10003278 intron dpr6 + chr3L_11_10000001 chr3L_10000001 RAL-805 954 chr3L 10104808 10104816 chr3L 10104893 10104902 5 86 4.5 6.5 5.5 0.8 94 chr3L 10104808 intron dpr6 + chr3L 10104855 intron dpr6 + chr3L 10104902 intron dpr6 + chr3L_5_10100001 chr3L_10100001 RAL-805 955 chr3L 10111485 10111497 chr3L 10111803 10111806 5 316 1.5 0.0 0.8 2.8 321 chr3L 10111485 intron dpr6 + chr3L 10111646 intron dpr6 + chr3L 10111806 intron dpr6 + chr3L_5_10110001 chr3L_10110001 RAL-805 956 chr3L 10223786 10223801 chr3L 10223869 10223885 9 83 1.5 1.0 1.2 4.1 99 chr3L 10223786 intron scramb1 - chr3L 10223836 intron scramb1 - chr3L 10223885 exon scramb1 - chr3L_9_10220001 chr3L_10220001 RAL-805 957 chr3L 10308748 10308773 chr3L 10308824 10308850 12 77 2.5 1.0 1.8 4.3 102 chr3L 10308748 intergenic not near genes chr3L 10308799 intergenic not near genes chr3L 10308850 intergenic not near genes chr3L_12_10305001 chr3L_10305001 RAL-805 958 chr3L 10348657 10348672 chr3L 10348773 10348789 6 117 2.5 0.5 1.5 2.4 132 chr3L 10348657 intron CR44327 + chr3L 10348723 intron CR44327 + chr3L 10348789 intron CR44327 + chr3L_6_10345001 chr3L_10345001 RAL-805 959 chr3L 10386387 10386417 chr3L 10386464 10386493 10 76 2.0 3.0 2.5 2.9 106 chr3L 10386387 intergenic CR45245 + chr3L 10386440 intergenic CR45245 + chr3L 10386493 5` UTR CR45245 + chr3L_10_10385001 chr3L_10385001 RAL-805 960 chr3L 10414944 10414975 chr3L 10417316 10417347 Doc 11 2367 3.0 2.5 2.8 2.9 2403 chr3L 10414944 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417347 intergenic not near genes chr3L_11_10415001 chr3L_10415001 RAL-805 961 chr3L 10476582 10476610 chr3L 10476667 10476686 8 83 4.5 5.5 5.0 1.3 104 chr3L 10476582 intergenic not near genes chr3L 10476634 intergenic not near genes chr3L 10476686 intergenic not near genes chr3L_8_10475001 chr3L_10475001 RAL-805 962 chr3L 10526637 10526652 chr3L 10526717 10526728 5 79 2.0 3.0 2.5 1.4 91 chr3L 10526637 intron A2bp1 + chr3L 10526682 intron A2bp1 + chr3L 10526728 intron A2bp1 + chr3L_5_10525001 chr3L_10525001 RAL-805 963 chr3L 10601219 10601230 chr3L 10601302 10601323 6 90 0.5 2.5 1.5 2.4 104 chr3L 10601219 intergenic not near genes chr3L 10601271 intergenic not near genes chr3L 10601323 intergenic not near genes chr3L_6_10600001 chr3L_10600001 RAL-805 964 chr3L 10658081 10658207 chr3L 10658158 10658334 15 107 0.5 0.5 0.5 10.0 253 chr3L 10658081 intron CG32066 - chr3L 10658208 intron CG32066 - chr3L 10658334 intron CG32066 - chr3L_15_10655001 chr3L_10655001 RAL-805 965 chr3L 10722000 10722017 chr3L 10722082 10722099 7 82 1.0 0.0 0.5 4.7 99 chr3L 10722000 intergenic not near genes chr3L 10722050 intergenic not near genes chr3L 10722099 intergenic not near genes chr3L_7_10720001 chr3L_10720001 RAL-805 966 chr3L 10887826 10887845 chr3L 10887922 10887941 6 96 2.5 2.5 2.5 1.7 115 chr3L 10887826 intergenic not near genes chr3L 10887884 intergenic not near genes chr3L 10887941 intergenic not near genes chr3L_6_10885001 chr3L_10885001 RAL-805 967 chr3L 10888818 10888855 chr3L 10888930 10888967 5 112 1.0 4.0 2.5 1.4 149 chr3L 10888818 intergenic not near genes chr3L 10888892 intergenic not near genes chr3L 10888967 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-805 968 chr3L 10956461 10956465 chr3L 10956569 10956583 4 116 2.0 3.0 2.5 1.1 122 chr3L 10956461 intergenic not near genes chr3L 10956522 intergenic not near genes chr3L 10956583 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-805 969 chr3L 10957021 10957035 chr3L 10957097 10957111 8 75 1.5 7.0 4.2 1.5 90 chr3L 10957021 intergenic not near genes chr3L 10957066 intergenic not near genes chr3L 10957111 intergenic not near genes chr3L_8_10955001 chr3L_10955001 RAL-805 970 chr3L 11087059 11087087 chr3L 11088847 11088876 S-element 5 1789 2.0 3.0 2.5 1.4 1817 chr3L 11087059 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088876 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-805 971 chr3L 11105293 11105323 chr3L 11107003 11107034 X-element 6 1711 2.5 2.0 2.2 1.9 1741 chr3L 11105293 intergenic not near genes chr3L 11106164 intergenic not near genes chr3L 11107034 exon CG32073 - chr3L_6_11105001 chr3L_11105001 RAL-805 972 chr3L 11151751 11151776 chr3L 11151829 11151854 7 76 0.5 3.0 1.8 2.5 103 chr3L 11151751 intron CG32082 + chr3L 11151802 intron CG32082 + chr3L 11151854 intron CG32082 + chr3L_7_11150001 chr3L_11150001 RAL-805 973 chr3L 11264463 11264499 chr3L 11271414 11271451 17.6 10 6950 1.5 2.0 1.8 3.6 6988 chr3L 11264463 intergenic not near genes chr3L 11267957 intergenic not near genes chr3L 11271451 intergenic not near genes chr3L_10_11265001 chr3L_11265001 RAL-805 974 chr3L 11276681 11276695 chr3L 11276761 11276775 4 80 0.0 2.5 1.2 1.8 94 chr3L 11276681 intergenic not near genes chr3L 11276728 intergenic not near genes chr3L 11276775 intergenic not near genes chr3L_4_11275001 chr3L_11275001 RAL-805 975 chr3L 11344167 11344199 chr3L 11344255 11344287 6 88 2.5 0.0 1.2 2.7 120 chr3L 11344167 intergenic not near genes chr3L 11344227 intergenic not near genes chr3L 11344287 intergenic not near genes chr3L_6_11340001 chr3L_11340001 RAL-805 976 chr3L 11349018 11349045 chr3L 11349112 11349138 7 93 0.5 3.0 1.8 2.5 120 chr3L 11349018 intergenic CR45251 - chr3L 11349078 intergenic CR45251 - chr3L 11349138 intergenic CR45251 - chr3L_7_11345001 chr3L_11345001 RAL-805 977 chr3L 11355637 11355658 chr3L 11356032 11356053 11 395 4.0 2.0 3.0 2.8 416 chr3L 11355637 intergenic not near genes chr3L 11355845 intergenic not near genes chr3L 11356053 intergenic not near genes chr3L_11_11355001 chr3L_11355001 RAL-805 978 chr3L 11433783 11433811 chr3L 11433863 11433891 8 80 1.0 2.5 1.8 2.9 108 chr3L 11433783 intergenic not near genes chr3L 11433837 intergenic not near genes chr3L 11433891 intergenic not near genes chr3L_8_11430001 chr3L_11430001 RAL-805 979 chr3L 11574133 11574153 chr3L 11574223 11574245 10 91 4.0 3.0 3.5 2.2 112 chr3L 11574133 exon CG33490 - chr3L 11574189 exon CG33490 - chr3L 11574245 exon CG33490 - chr3L_10_11570001 chr3L_11570001 RAL-805 980 chr3L 11579556 11579581 chr3L 11579662 11579687 8 106 6.5 2.0 4.2 1.5 131 chr3L 11579556 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579687 intergenic CG43390 - chr3L_8_11575001 chr3L_11575001 RAL-805 981 chr3L 11588732 11588756 chr3L 11588888 11588912 7 156 2.0 4.0 3.0 1.8 180 chr3L 11588732 intergenic not near genes chr3L 11588822 intergenic not near genes chr3L 11588912 intergenic not near genes chr3L_7_11585001 chr3L_11585001 RAL-805 982 chr3L 11678106 11678124 chr3L 11678193 11678211 4 87 1.0 3.0 2.0 1.3 105 chr3L 11678106 intron CG32085 - chr3L 11678158 intron CG32085 - chr3L 11678211 intron CG32085 - chr3L_4_11675001 chr3L_11675001 RAL-805 983 chr3L 11723091 11723117 chr3L 11727886 11727912 Doc 5 4795 1.5 3.0 2.2 1.6 4821 chr3L 11723091 3` UTR Bmcp + chr3L 11725502 intron Bmcp + chr3L 11727912 3` UTR Bmcp + chr3L_5_11725001 chr3L_11725001 RAL-805 984 chr3L 11729677 11729705 chr3L 11729753 11729781 12 76 2.0 3.5 2.8 3.2 104 chr3L 11729677 exon CG32088 + chr3L 11729729 intron CG32088 + chr3L 11729781 exon CG32088 + chr3L_12_11725001 chr3L_11725001 RAL-805 985 chr3L 11744017 11744043 chr3L 11744121 11744148 6 107 3.5 0.0 1.8 2.1 131 chr3L 11744017 exon CG6024 - chr3L 11744082 intron CG6024 - chr3L 11744148 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-805 986 chr3L 11864559 11864580 chr3L 11865848 11865875 pogo 10 1294 5.0 0.5 2.8 2.6 1316 chr3L 11864559 intron CG44837 - chr3L 11865217 intron CG44837 - chr3L 11865875 intron CG44837 - chr3L_10_11865001 chr3L_11865001 RAL-805 987 chr3L 11868161 11868194 chr3L 11868237 11868270 17 76 5.5 0.5 3.0 4.2 109 chr3L 11868161 intron CG44837 - chr3L 11868216 intron CG44837 - chr3L 11868270 intron CG44837 - chr3L_17_11865001 chr3L_11865001 RAL-805 988 chr3L 11887070 11887269 chr3L 11887149 11887365 5 81 2.5 3.0 2.8 1.3 295 chr3L 11887070 intron CG44837 - chr3L 11887218 intron CG44837 - chr3L 11887365 intron,3` UTR CG44837 -,CG5897 - chr3L_5_11885001 chr3L_11885001 RAL-805 989 chr3L 11891826 11891854 chr3L 11892466 11892483 9 640 9.5 12.5 11.0 0.8 657 chr3L 11891826 intron CG44837 - chr3L 11892154 intron CG44837 - chr3L 11892483 intron CG44837 - chr3L_9_11890001 chr3L_11890001 RAL-805 990 chr3L 11891471 11891490 chr3L 11892748 11892767 6 1277 13.0 20.0 16.5 0.3 1296 chr3L 11891471 intron CG44837 - chr3L 11892119 intron CG44837 - chr3L 11892767 intron CG44837 - chr3L_6_11890001 chr3L_11890001 RAL-805 991 chr3L 11984569 11984586 chr3L 11984657 11984675 4 90 3.5 0.0 1.8 1.4 106 chr3L 11984569 intergenic CG6938 + chr3L 11984622 intergenic CG6938 + chr3L 11984675 intergenic CG6938 + chr3L_4_11980001 chr3L_11980001 RAL-805 992 chr3L 12013911 12013937 chr3L 12014002 12014028 9 91 2.5 2.5 2.5 2.6 117 chr3L 12013911 intron rols - chr3L 12013970 intron rols - chr3L 12014028 intron rols - chr3L_9_12010001 chr3L_12010001 RAL-805 993 chr3L 12027801 12027816 chr3L 12028137 12028152 6 336 3.0 0.0 1.5 2.4 351 chr3L 12027801 intron,5` UTR rols -,CR43994 + chr3L 12027976 intron,5` UTR rols -,CR43994 + chr3L 12028152 intron,5` UTR rols -,CR43994 + chr3L_6_12025001 chr3L_12025001 RAL-805 994 chr3L 12052710 12052737 chr3L 12052799 12052826 15 89 3.0 3.0 3.0 3.8 116 chr3L 12052710 intron rols - chr3L 12052768 intron rols - chr3L 12052826 intron rols - chr3L_15_12050001 chr3L_12050001 RAL-805 995 chr3L 12075430 12075449 chr3L 12075517 12075538 7 89 1.0 0.0 0.5 4.7 108 chr3L 12075430 intron Sema-5c - chr3L 12075484 intron Sema-5c - chr3L 12075538 intron Sema-5c - chr3L_7_12075001 chr3L_12075001 RAL-805 996 chr3L 12089091 12089112 chr3L 12089171 12089192 7 80 1.5 3.0 2.2 2.2 101 chr3L 12089091 3` UTR CG17154 + chr3L 12089142 3` UTR CG17154 + chr3L 12089192 3` UTR CG17154 + chr3L_7_12085001 chr3L_12085001 RAL-805 997 chr3L 12106277 12106294 chr3L 12106365 12106383 5 89 0.0 5.5 2.8 1.3 106 chr3L 12106277 intergenic not near genes chr3L 12106330 intergenic not near genes chr3L 12106383 intergenic not near genes chr3L_5_12105001 chr3L_12105001 RAL-805 998 chr3L 12119758 12119782 chr3L 12119855 12119879 5 97 1.5 1.0 1.2 2.3 121 chr3L 12119758 3` UTR ssp + chr3L 12119818 intergenic ssp +,CG11560 + chr3L 12119879 intergenic ssp +,CG11560 + chr3L_5_12115001 chr3L_12115001 RAL-805 999 chr3L 12300855 12300882 chr3L 12300994 12301021 6 139 1.5 4.5 3.0 1.5 166 chr3L 12300855 intergenic CR44550 + chr3L 12300938 intergenic CR44550 + chr3L 12301021 5` UTR CR44550 + chr3L_6_12300001 chr3L_12300001 RAL-805 1000 chr3L 12317420 12317453 chr3L 12317519 12317549 12 98 3.0 2.0 2.5 3.4 129 chr3L 12317420 intergenic not near genes chr3L 12317484 intergenic not near genes chr3L 12317549 intergenic not near genes chr3L_12_12315001 chr3L_12315001 RAL-805 1001 chr3L 12321945 12321965 chr3L 12322413 12322434 6 466 4.0 4.5 4.2 1.2 489 chr3L 12321945 intergenic not near genes chr3L 12322190 intergenic not near genes chr3L 12322434 intergenic not near genes chr3L_6_12320001 chr3L_12320001 RAL-805 1002 chr3L 12353925 12353951 chr3L 12354012 12354031 5 86 0.5 4.0 2.2 1.6 106 chr3L 12353925 intergenic not near genes chr3L 12353978 intergenic not near genes chr3L 12354031 intergenic not near genes chr3L_5_12350001 chr3L_12350001 RAL-805 1003 chr3L 12362567 12362588 chr3L 12363009 12363029 4 442 1.5 11.0 6.2 0.6 462 chr3L 12362567 intergenic not near genes chr3L 12362798 intergenic not near genes chr3L 12363029 intergenic not near genes chr3L_4_12360001 chr3L_12360001 RAL-805 1004 chr3L 12393513 12393540 chr3L 12393737 12393764 8 222 4.0 4.5 4.2 1.5 251 chr3L 12393513 intergenic CG32104 - chr3L 12393638 intergenic CG32104 - chr3L 12393764 intergenic CG32104 - chr3L_8_12390001 chr3L_12390001 RAL-805 1005 chr3L 12446278 12446298 chr3L 12446356 12446361 4 74 2.5 2.0 2.2 1.2 83 chr3L 12446278 intergenic not near genes chr3L 12446320 intergenic not near genes chr3L 12446361 intergenic not near genes chr3L_4_12445001 chr3L_12445001 RAL-805 1006 chr3L 12476290 12476321 chr3L 12476367 12476395 5 76 1.5 5.0 3.2 1.2 105 chr3L 12476290 intron CG10663 - chr3L 12476342 intron CG10663 - chr3L 12476395 intron CG10663 - chr3L_5_12475001 chr3L_12475001 RAL-805 1007 chr3L 12491707 12491734 chr3L 12491790 12491817 4 83 0.0 0.5 0.2 3.3 110 chr3L 12491707 intergenic CG10657 -,CR45682 + chr3L 12491762 intergenic CG10657 -,CR45682 + chr3L 12491817 intergenic CG10657 -,CR45682 + chr3L_4_12490001 chr3L_12490001 RAL-805 1008 chr3L 12591633 12591640 chr3L 12591710 12591715 4 76 5.5 8.0 6.8 0.5 82 chr3L 12591633 intron ara + chr3L 12591674 intron ara + chr3L 12591715 intron ara + chr3L_4_12590001 chr3L_12590001 RAL-805 1009 chr3L 12626153 12626165 chr3L 12626262 12626274 6 109 1.0 3.5 2.2 1.9 121 chr3L 12626153 intergenic not near genes chr3L 12626214 intergenic not near genes chr3L 12626274 intergenic not near genes chr3L_6_12625001 chr3L_12625001 RAL-805 1010 chr3L 12647952 12647970 chr3L 12648028 12648046 5 76 2.0 1.0 1.5 2.0 94 chr3L 12647952 5` UTR CR32111 + chr3L 12647999 5` UTR CR32111 + chr3L 12648046 5` UTR CR32111 + chr3L_5_12645001 chr3L_12645001 RAL-805 1011 chr3L 12656781 12656803 chr3L 12656887 12656909 7 106 3.5 6.0 4.8 1.2 128 chr3L 12656781 intergenic not near genes chr3L 12656845 intergenic not near genes chr3L 12656909 intergenic not near genes chr3L_7_12655001 chr3L_12655001 RAL-805 1012 chr3L 12720327 12720355 chr3L 12720412 12720440 8 85 3.0 3.0 3.0 2.0 113 chr3L 12720327 intergenic not near genes chr3L 12720384 intergenic not near genes chr3L 12720440 intergenic not near genes chr3L_8_12720001 chr3L_12720001 RAL-805 1013 chr3L 12894800 12894821 chr3L 12894878 12894899 6 78 7.0 7.5 7.2 0.7 99 chr3L 12894800 intergenic CG14118 + chr3L 12894850 intergenic CG14118 + chr3L 12894899 intergenic CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-805 1014 chr3L 12898124 12898156 chr3L 12898305 12898323 8 176 0.0 2.5 1.2 3.6 199 chr3L 12898124 intergenic not near genes chr3L 12898224 intergenic not near genes chr3L 12898323 intergenic not near genes chr3L_8_12895001 chr3L_12895001 RAL-805 1015 chr3L 12919287 12919306 chr3L 12924747 12924777 Rt1c 6 5469 2.5 3.0 2.8 1.6 5490 chr3L 12919287 intergenic not near genes chr3L 12922032 intergenic not near genes chr3L 12924777 intergenic not near genes chr3L_6_12920001 chr3L_12920001 RAL-805 1016 chr3L 12957785 12957815 chr3L 12962267 12962297 copia 13 4482 3.0 4.0 3.5 2.9 4512 chr3L 12957785 intergenic not near genes chr3L 12960041 intergenic not near genes chr3L 12962297 intergenic not near genes chr3L_13_12960001 chr3L_12960001 RAL-805 1017 chr3L 13050564 13050580 chr3L 13050643 13050659 4 79 2.0 1.5 1.8 1.4 95 chr3L 13050564 intergenic not near genes chr3L 13050612 intergenic not near genes chr3L 13050659 intergenic not near genes chr3L_4_13050001 chr3L_13050001 RAL-805 1018 chr3L 13142156 13142175 chr3L 13142269 13142283 10 112 3.0 4.0 3.5 2.2 127 chr3L 13142156 intergenic not near genes chr3L 13142220 intergenic not near genes chr3L 13142283 intergenic not near genes chr3L_10_13140001 chr3L_13140001 RAL-805 1019 chr3L 13223219 13223224 chr3L 13223293 13223301 4 76 0.0 2.0 1.0 2.0 82 chr3L 13223219 intergenic not near genes chr3L 13223260 intergenic not near genes chr3L 13223301 intergenic not near genes chr3L_4_13220001 chr3L_13220001 RAL-805 1020 chr3L 13261817 13261840 chr3L 13261904 13261930 11 90 2.0 4.5 3.2 2.6 113 chr3L 13261817 intron caps + chr3L 13261874 intron caps + chr3L 13261930 intron caps + chr3L_11_13260001 chr3L_13260001 RAL-805 1021 chr3L 13311792 13311820 chr3L 13311870 13311898 6 78 2.0 2.0 2.0 2.0 106 chr3L 13311792 intergenic not near genes chr3L 13311845 intergenic not near genes chr3L 13311898 intergenic not near genes chr3L_6_13310001 chr3L_13310001 RAL-805 1022 chr3L 13525158 13525186 chr3L 13532954 13532982 roo 11 7795 3.5 5.5 4.5 2.0 7824 chr3L 13525158 intergenic not near genes chr3L 13529070 intergenic not near genes chr3L 13532982 intergenic not near genes chr3L_11_13525001 chr3L_13525001 RAL-805 1023 chr3L 13686058 13686093 chr3L 13686225 13686260 10 165 4.5 3.5 4.0 2.0 202 chr3L 13686058 intron bru-3 - chr3L 13686159 intron bru-3 - chr3L 13686260 intron bru-3 - chr3L_10_13685001 chr3L_13685001 RAL-805 1024 chr3L 13704838 13704874 chr3L 13706014 13706052 12 1178 1.5 1.5 1.5 4.8 1214 chr3L 13704838 intron bru-3 - chr3L 13705445 intron bru-3 - chr3L 13706052 intron bru-3 - chr3L_12_13705001 chr3L_13705001 RAL-805 1025 chr3L 13752794 13752806 chr3L 13752870 13752892 5 85 4.0 1.0 2.5 1.4 98 chr3L 13752794 intron bru-3 - chr3L 13752843 intron bru-3 - chr3L 13752892 intron bru-3 - chr3L_5_13750001 chr3L_13750001 RAL-805 1026 chr3L 13804548 13804568 chr3L 13822834 13822854 roo 6 18286 2.0 6.0 4.0 1.2 18306 chr3L 13804548 intergenic not near genes chr3L 13813701 intergenic not near genes chr3L 13822854 intergenic not near genes chr3L_6_13810001 chr3L_13810001 RAL-805 1027 chr3L 13888730 13888755 chr3L 13888878 13888903 10 148 1.5 2.5 2.0 3.3 173 chr3L 13888730 intron dysc - chr3L 13888816 intron dysc - chr3L 13888903 intron dysc - chr3L_10_13885001 chr3L_13885001 RAL-805 1028 chr3L 13931359 13931370 chr3L 13931446 13931475 7 100 2.5 4.0 3.2 1.7 116 chr3L 13931359 intron Gl + chr3L 13931417 intron Gl + chr3L 13931475 intron Gl + chr3L_7_13930001 chr3L_13930001 RAL-805 1029 chr3L 13948650 13948663 chr3L 13949117 13949141 4 475 2.0 2.0 2.0 1.3 491 chr3L 13948650 intron CG32137 + chr3L 13948896 intron CG32137 + chr3L 13949141 intron CG32137 + chr3L_4_13945001 chr3L_13945001 RAL-805 1030 chr3L 14036676 14036698 chr3L 14036769 14036791 10 93 2.0 2.5 2.2 3.1 115 chr3L 14036676 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036734 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036791 3` UTR pncr014:3L - chr3L_10_14035001 chr3L_14035001 RAL-805 1031 chr3L 14076291 14076318 chr3L 14076369 14076396 10 76 0.0 2.0 1.0 5.0 105 chr3L 14076291 intron btl + chr3L 14076344 intron btl + chr3L 14076396 intron btl + chr3L_10_14075001 chr3L_14075001 RAL-805 1032 chr3L 14107274 14107293 chr3L 14107350 14107370 7 77 4.0 4.0 4.0 1.4 96 chr3L 14107274 intron Sox21a - chr3L 14107322 intron Sox21a - chr3L 14107370 intron Sox21a - chr3L_7_14105001 chr3L_14105001 RAL-805 1033 chr3L 14214857 14214869 chr3L 14214942 14214954 6 85 0.0 3.5 1.8 2.1 97 chr3L 14214857 intron nuf + chr3L 14214906 intron nuf + chr3L 14214954 intron nuf + chr3L_6_14210001 chr3L_14210001 RAL-805 1034 chr3L 14234840 14234854 chr3L 14234937 14234951 5 97 2.0 2.5 2.2 1.6 111 chr3L 14234840 intergenic CG34244 -,CG7924 + chr3L 14234896 intergenic CG34244 -,CG7924 + chr3L 14234951 intergenic CG34244 -,CG7924 + chr3L_5_14230001 chr3L_14230001 RAL-805 1035 chr3L 14239988 14240007 chr3L 14240085 14240104 7 97 0.0 0.5 0.2 5.8 116 chr3L 14239988 intergenic not near genes chr3L 14240046 intergenic not near genes chr3L 14240104 intergenic not near genes chr3L_7_14240001 chr3L_14240001 RAL-805 1036 chr3L 14245565 14245587 chr3L 14245659 14245681 1360 5 94 1.5 2.0 1.8 1.8 116 chr3L 14245565 3` UTR CR44561 - chr3L 14245623 3` UTR CR44561 - chr3L 14245681 3` UTR CR44561 - chr3L_5_14245001 chr3L_14245001 RAL-805 1037 chr3L 14267370 14267402 chr3L 14271810 14271811 F-element 7 4432 6.0 2.5 4.2 1.3 4441 chr3L 14267370 intergenic not near genes chr3L 14269590 intergenic not near genes chr3L 14271811 intergenic not near genes chr3L_7_14265001 chr3L_14265001 RAL-805 1038 chr3L 14282596 14282604 chr3L 14282669 14282682 5 77 6.0 5.5 5.8 0.7 86 chr3L 14282596 intron fz + chr3L 14282639 intron fz + chr3L 14282682 intron fz + chr3L_5_14280001 chr3L_14280001 RAL-805 1039 chr3L 14295983 14296012 chr3L 14296468 14296498 roo 5 486 0.5 2.0 1.2 2.3 515 chr3L 14295983 intron fz + chr3L 14296240 intron fz + chr3L 14296498 intron fz + chr3L_5_14295001 chr3L_14295001 RAL-805 1040 chr3L 14326964 14326996 chr3L 14327100 14327132 5 136 4.0 2.0 3.0 1.2 168 chr3L 14326964 intron fz + chr3L 14327048 intron fz + chr3L 14327132 intron fz + chr3L_5_14325001 chr3L_14325001 RAL-805 1041 chr3L 14356520 14356552 chr3L 14356599 14356632 18 80 4.0 1.5 2.8 4.7 112 chr3L 14356520 intron fz + chr3L 14356576 intron fz + chr3L 14356632 intron fz + chr3L_18_14355001 chr3L_14355001 RAL-805 1042 chr3L 14399183 14399193 chr3L 14399272 14399282 5 89 3.5 0.0 1.8 1.8 99 chr3L 14399183 intergenic not near genes chr3L 14399232 intergenic not near genes chr3L 14399282 intergenic not near genes chr3L_5_14395001 chr3L_14395001 RAL-805 1043 chr3L 14468446 14468461 chr3L 14473652 14473662 copia 5 5205 5.0 4.0 4.5 0.9 5216 chr3L 14468446 intron bbg - chr3L 14471054 intron bbg - chr3L 14473662 intron bbg - chr3L_5_14470001 chr3L_14470001 RAL-805 1044 chr3L 14522056 14522085 chr3L 14522143 14522172 7 87 1.0 2.5 1.8 2.5 116 chr3L 14522056 intron bbg - chr3L 14522114 intron bbg - chr3L 14522172 intron bbg - chr3L_7_14520001 chr3L_14520001 RAL-805 1045 chr3L 14565571 14565600 chr3L 14565652 14565681 16 80 3.0 0.5 1.8 5.7 110 chr3L 14565571 intergenic not near genes chr3L 14565626 intergenic not near genes chr3L 14565681 intergenic not near genes chr3L_16_14565001 chr3L_14565001 RAL-805 1046 chr3L 14633804 14633812 chr3L 14633900 14633908 5 96 0.5 2.0 1.2 2.3 104 chr3L 14633804 intron dlp + chr3L 14633856 intron dlp + chr3L 14633908 intron dlp + chr3L_5_14630001 chr3L_14630001 RAL-805 1047 chr3L 14740889 14740922 chr3L 14740978 14741010 8 89 2.0 1.0 1.5 3.2 121 chr3L 14740889 intron ome + chr3L 14740950 intron ome + chr3L 14741010 intron ome + chr3L_8_14740001 chr3L_14740001 RAL-805 1048 chr3L 14902385 14902397 chr3L 14902456 14902474 4 74 1.0 3.0 2.0 1.3 89 chr3L 14902385 intergenic not near genes chr3L 14902430 intergenic not near genes chr3L 14902474 intergenic not near genes chr3L_4_14900001 chr3L_14900001 RAL-805 1049 chr3L 14922100 14922130 chr3L 14922208 14922236 9 106 5.5 0.5 3.0 2.2 136 chr3L 14922100 intron DCX-EMAP + chr3L 14922168 intron DCX-EMAP + chr3L 14922236 intron DCX-EMAP + chr3L_9_14920001 chr3L_14920001 RAL-805 1050 chr3L 14933452 14933458 chr3L 14933534 14933540 4 82 1.5 3.5 2.5 1.1 88 chr3L 14933452 intron DCX-EMAP + chr3L 14933496 intron DCX-EMAP + chr3L 14933540 intron DCX-EMAP + chr3L_4_14930001 chr3L_14930001 RAL-805 1051 chr3L 14954086 14954115 chr3L 14954216 14954246 10 131 1.0 2.5 1.8 3.6 160 chr3L 14954086 intergenic not near genes chr3L 14954166 intergenic not near genes chr3L 14954246 intergenic not near genes chr3L_10_14950001 chr3L_14950001 RAL-805 1052 chr3L 14993271 14993297 chr3L 14993349 14993375 6 75 2.5 4.5 3.5 1.3 104 chr3L 14993271 intron Zip71B + chr3L 14993323 intron Zip71B + chr3L 14993375 intron Zip71B + chr3L_6_14990001 chr3L_14990001 RAL-805 1053 chr3L 15048126 15048150 chr3L 15048490 15048514 5 364 9.0 13.5 11.2 0.4 388 chr3L 15048126 intron Sytbeta - chr3L 15048320 intron Sytbeta - chr3L 15048514 intron Sytbeta - chr3L_5_15045001 chr3L_15045001 RAL-805 1054 chr3L 15053428 15053449 chr3L 15053767 15053787 4 339 0.0 4.5 2.2 1.2 359 chr3L 15053428 intron Sytbeta - chr3L 15053608 intron,3` UTR Sytbeta -,CG18649 - chr3L 15053787 intron,3` UTR Sytbeta -,CG18649 - chr3L_4_15050001 chr3L_15050001 RAL-805 1055 chr3L 15085049 15085080 chr3L 15086215 15086242 1360 5 1165 3.0 1.5 2.2 1.6 1193 chr3L 15085049 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086242 intron cp309 - chr3L_5_15085001 chr3L_15085001 RAL-805 1056 chr3L 15185744 15185773 chr3L 15185823 15185852 6 79 2.0 4.0 3.0 1.5 108 chr3L 15185744 intergenic not near genes chr3L 15185798 intergenic not near genes chr3L 15185852 intergenic not near genes chr3L_6_15185001 chr3L_15185001 RAL-805 1057 chr3L 15192770 15192797 chr3L 15192860 15192886 5 90 2.0 3.0 2.5 1.4 116 chr3L 15192770 intergenic not near genes chr3L 15192828 intergenic not near genes chr3L 15192886 intergenic not near genes chr3L_5_15190001 chr3L_15190001 RAL-805 1058 chr3L 15384956 15384969 chr3L 15385084 15385097 6 127 6.5 0.0 3.2 1.4 141 chr3L 15384956 intergenic not near genes chr3L 15385026 intergenic not near genes chr3L 15385097 intergenic not near genes chr3L_6_15385001 chr3L_15385001 RAL-805 1059 chr3L 15384972 15384990 chr3L 15385083 15385107 5 119 3.5 0.0 1.8 1.8 135 chr3L 15384972 intergenic not near genes chr3L 15385040 intergenic not near genes chr3L 15385107 intergenic not near genes chr3L_5_15385001 chr3L_15385001 RAL-805 1060 chr3L 15406021 15406055 chr3L 15406103 15406137 6 82 1.0 2.0 1.5 2.4 116 chr3L 15406021 intergenic not near genes chr3L 15406079 intergenic not near genes chr3L 15406137 intergenic not near genes chr3L_6_15405001 chr3L_15405001 RAL-805 1061 chr3L 15423759 15423781 chr3L 15426603 15426625 opus 6 2844 4.0 2.5 3.2 1.4 2866 chr3L 15423759 intergenic not near genes chr3L 15425192 intergenic not near genes chr3L 15426625 intergenic not near genes chr3L_6_15425001 chr3L_15425001 RAL-805 1062 chr3L 15443589 15443612 chr3L 15443665 15443688 7 76 1.0 0.5 0.8 3.9 99 chr3L 15443589 intergenic not near genes chr3L 15443638 intergenic not near genes chr3L 15443688 intergenic not near genes chr3L_7_15440001 chr3L_15440001 RAL-805 1063 chr3L 15466047 15466139 chr3L 15466129 15466231 9 91 0.0 0.0 0.0 9.0 184 chr3L 15466047 intergenic not near genes chr3L 15466139 intergenic not near genes chr3L 15466231 intergenic not near genes chr3L_9_15465001 chr3L_15465001 RAL-805 1064 chr3L 15482607 15482626 chr3L 15482688 15482706 4 81 2.0 2.0 2.0 1.3 99 chr3L 15482607 intergenic not near genes chr3L 15482656 intergenic not near genes chr3L 15482706 intergenic not near genes chr3L_4_15480001 chr3L_15480001 RAL-805 1065 chr3L 15489064 15489068 chr3L 15489344 15489348 5 280 4.0 4.5 4.2 1.0 284 chr3L 15489064 intergenic not near genes chr3L 15489206 intergenic not near genes chr3L 15489348 intergenic not near genes chr3L_5_15485001 chr3L_15485001 RAL-805 1066 chr3L 15554922 15554950 chr3L 15556709 15556736 S-element 10 1787 0.5 2.5 1.5 4.0 1814 chr3L 15554922 intron AGO2 + chr3L 15555829 intron AGO2 + chr3L 15556736 intron AGO2 + chr3L_10_15555001 chr3L_15555001 RAL-805 1067 chr3L 15633091 15633209 chr3L 15633167 15633289 12 77 1.5 1.5 1.5 4.8 198 chr3L 15633091 intron comm3 - chr3L 15633190 intron comm3 - chr3L 15633289 intron comm3 - chr3L_12_15630001 chr3L_15630001 RAL-805 1068 chr3L 15638027 15638043 chr3L 15638164 15638180 4 137 3.0 0.0 1.5 1.6 153 chr3L 15638027 intron comm3 - chr3L 15638104 intron comm3 - chr3L 15638180 intron comm3 - chr3L_4_15635001 chr3L_15635001 RAL-805 1069 chr3L 15730421 15730450 chr3L 15730530 15730537 11 106 1.5 3.0 2.2 3.4 116 chr3L 15730421 intergenic not near genes chr3L 15730479 intergenic not near genes chr3L 15730537 intergenic not near genes chr3L_11_15730001 chr3L_15730001 RAL-805 1070 chr3L 15756882 15756912 chr3L 15756965 15756995 10 80 3.0 0.0 1.5 4.0 113 chr3L 15756882 intergenic not near genes chr3L 15756938 intergenic not near genes chr3L 15756995 intergenic not near genes chr3L_10_15755001 chr3L_15755001 RAL-805 1071 chr3L 15769005 15769012 chr3L 15769116 15769123 5 111 2.0 0.0 1.0 2.5 118 chr3L 15769005 intergenic not near genes chr3L 15769064 intergenic not near genes chr3L 15769123 intergenic not near genes chr3L_5_15765001 chr3L_15765001 RAL-805 1072 chr3L 15883193 15883222 chr3L 15883485 15883515 8 293 1.5 4.0 2.8 2.1 322 chr3L 15883193 intron pHCl - chr3L 15883354 intron pHCl - chr3L 15883515 intron pHCl - chr3L_8_15880001 chr3L_15880001 RAL-805 1073 chr3L 15929198 15929223 chr3L 15938345 15938370 roo 8 9147 3.0 3.0 3.0 2.0 9172 chr3L 15929198 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938370 intron Pka-C3 - chr3L_8_15930001 chr3L_15930001 RAL-805 1074 chr3L 16051204 16051230 chr3L 16051564 16051595 9 364 1.5 1.0 1.2 4.1 391 chr3L 16051204 intergenic th - chr3L 16051400 intergenic th - chr3L 16051595 intergenic Mbs + chr3L_9_16050001 chr3L_16050001 RAL-805 1075 chr3L 16099946 16099968 chr3L 16100028 16100042 5 80 2.5 2.5 2.5 1.4 96 chr3L 16099946 exon ms(3)72Dt + chr3L 16099994 3` UTR ms(3)72Dt + chr3L 16100042 3` UTR ms(3)72Dt + chr3L_5_16095001 chr3L_16095001 RAL-805 1076 chr3L 16106366 16106383 chr3L 16106548 16106566 6 182 3.0 3.0 3.0 1.5 200 chr3L 16106366 exon CG43295 + chr3L 16106466 intergenic CG43295 +,Zn72D - chr3L 16106566 intergenic Zn72D -,CG43295 + chr3L_6_16105001 chr3L_16105001 RAL-805 1077 chr3L 16150603 16150621 chr3L 16150719 16150733 6 116 4.5 2.0 3.2 1.4 130 chr3L 16150603 intron CG5151 - chr3L 16150668 intron CG5151 - chr3L 16150733 intron CG5151 - chr3L_6_16150001 chr3L_16150001 RAL-805 1078 chr3L 16158805 16158829 chr3L 16158890 16158914 6 85 0.0 2.0 1.0 3.0 109 chr3L 16158805 intron CG5151 - chr3L 16158860 intron CG5151 - chr3L 16158914 intron CG5151 - chr3L_6_16155001 chr3L_16155001 RAL-805 1079 chr3L 16159372 16159396 chr3L 16159492 16159516 9 120 27.5 22.5 25.0 0.3 144 chr3L 16159372 intron CG5151 - chr3L 16159444 intron CG5151 - chr3L 16159516 intron CG5151 - chr3L_9_16155001 chr3L_16155001 RAL-805 1080 chr3L 16182065 16182093 chr3L 16182184 16182212 10 120 2.5 1.5 2.0 3.3 147 chr3L 16182065 intergenic not near genes chr3L 16182138 intergenic not near genes chr3L 16182212 intergenic not near genes chr3L_10_16180001 chr3L_16180001 RAL-805 1081 chr3L 16184086 16184116 chr3L 16188930 16188960 X-element 9 4844 2.5 1.0 1.8 3.2 4874 chr3L 16184086 intergenic not near genes chr3L 16186523 intergenic not near genes chr3L 16188960 intergenic not near genes chr3L_9_16185001 chr3L_16185001 RAL-805 1082 chr3L 16220151 16220169 chr3L 16220269 16220287 5 118 0.0 2.5 1.2 2.3 136 chr3L 16220151 intergenic not near genes chr3L 16220219 intergenic not near genes chr3L 16220287 intergenic not near genes chr3L_5_16220001 chr3L_16220001 RAL-805 1083 chr3L 16235002 16235026 chr3L 16235091 16235115 10 89 4.0 3.0 3.5 2.2 113 chr3L 16235002 intron l(3)72Dp + chr3L 16235058 intron l(3)72Dp + chr3L 16235115 intron l(3)72Dp + chr3L_10_16235001 chr3L_16235001 RAL-805 1084 chr3L 16240715 16240717 chr3L 16240864 16240866 4 149 0.5 2.0 1.2 1.8 151 chr3L 16240715 intergenic not near genes chr3L 16240790 intergenic not near genes chr3L 16240866 intergenic not near genes chr3L_4_16240001 chr3L_16240001 RAL-805 1085 chr3L 16246558 16246584 chr3L 16250232 16250258 7 3674 20.5 12.5 16.5 0.4 3700 chr3L 16246558 intergenic not near genes chr3L 16248408 intergenic not near genes chr3L 16250258 3` UTR CG13055 - chr3L_7_16245001 chr3L_16245001 RAL-805 1086 chr3L 16340263 16340290 chr3L 16340387 16340414 9 123 2.0 2.0 2.0 3.0 151 chr3L 16340263 intron CG4998 + chr3L 16340338 intron CG4998 + chr3L 16340414 intron CG4998 + chr3L_9_16340001 chr3L_16340001 RAL-805 1087 chr3L 16443847 16443879 chr3L 16446187 16446219 Doc 8 2340 2.0 6.5 4.2 1.5 2372 chr3L 16443847 intron,intron CG33158 +,dsx-c73A - chr3L 16445033 intron,intron CG33158 +,dsx-c73A - chr3L 16446219 intron,intron CG33158 +,dsx-c73A - chr3L_8_16445001 chr3L_16445001 RAL-805 1088 chr3L 16493978 16494012 chr3L 16494494 16494529 jockey 12 515 9.0 7.0 8.0 1.3 551 chr3L 16493978 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494254 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494529 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_12_16490001 chr3L_16490001 RAL-805 1089 chr3L 16521818 16521838 chr3L 16521911 16521931 8 93 2.0 6.5 4.2 1.5 113 chr3L 16521818 intron CG43373 - chr3L 16521874 intron CG43373 - chr3L 16521931 intron CG43373 - chr3L_8_16520001 chr3L_16520001 RAL-805 1090 chr3L 16540054 16540087 chr3L 16540142 16540175 10 88 3.0 4.0 3.5 2.2 121 chr3L 16540054 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540175 intron CG43373 - chr3L_10_16540001 chr3L_16540001 RAL-805 1091 chr3L 16610685 16610716 chr3L 16610770 16610801 12 85 1.0 4.0 2.5 3.4 116 chr3L 16610685 3` UTR Su(P) - chr3L 16610743 exon Su(P) - chr3L 16610801 exon Su(P) - chr3L_12_16610001 chr3L_16610001 RAL-805 1092 chr3L 16616509 16616541 chr3L 16621836 16621869 297 10 5325 3.0 2.0 2.5 2.9 5360 chr3L 16616509 3` UTR Abl - chr3L 16619189 3` UTR Abl - chr3L 16621869 3` UTR Abl - chr3L_10_16615001 chr3L_16615001 RAL-805 1093 chr3L 16681865 16681874 chr3L 16681955 16681965 6 91 3.5 4.0 3.8 1.2 100 chr3L 16681865 intron,intron Lasp -,CG43954 - chr3L 16681915 intron,intron Lasp -,CG43954 - chr3L 16681965 intron,intron Lasp -,CG43954 - chr3L_6_16680001 chr3L_16680001 RAL-805 1094 chr3L 16684025 16684039 chr3L 16689246 16689260 copia 5 5221 0.5 2.5 1.5 2.0 5235 chr3L 16684025 intron,intron Lasp -,CG43954 - chr3L 16686642 intron,intron Lasp -,CG43954 - chr3L 16689260 intron,intron Lasp -,CG43954 - chr3L_5_16685001 chr3L_16685001 RAL-805 1095 chr3L 16749203 16749237 chr3L 16749279 16749313 14 76 2.5 1.0 1.8 5.0 110 chr3L 16749203 intergenic not near genes chr3L 16749258 intergenic not near genes chr3L 16749313 intergenic not near genes chr3L_14_16745001 chr3L_16745001 RAL-805 1096 chr3L 16800578 16800611 chr3L 16800716 16800749 6 138 2.5 1.5 2.0 2.0 171 chr3L 16800578 intron CG9674 - chr3L 16800664 intron CG9674 - chr3L 16800749 intron CG9674 - chr3L_6_16800001 chr3L_16800001 RAL-805 1097 chr3L 16818746 16818780 chr3L 16818822 16818856 11 76 4.0 3.5 3.8 2.3 110 chr3L 16818746 intron,intron nudC +,CG13024 - chr3L 16818801 intron,intron nudC +,CG13024 - chr3L 16818856 intron,intron nudC +,CG13024 - chr3L_11_16815001 chr3L_16815001 RAL-805 1098 chr3L 16830778 16830792 chr3L 16830861 16830874 7 82 3.0 1.0 2.0 2.3 96 chr3L 16830778 intergenic not near genes chr3L 16830826 intergenic not near genes chr3L 16830874 intergenic not near genes chr3L_7_16830001 chr3L_16830001 RAL-805 1099 chr3L 16861029 16861054 chr3L 16861131 16861156 9 102 1.0 1.5 1.2 4.1 127 chr3L 16861029 intron,exon Rh4 -,CG13029 + chr3L 16861092 intron,intron Rh4 -,CG13029 + chr3L 16861156 intron,exon Rh4 -,CG13029 + chr3L_9_16860001 chr3L_16860001 RAL-805 1100 chr3L 16867546 16867568 chr3L 16867624 16867646 5 77 2.0 4.5 3.2 1.2 100 chr3L 16867546 intron Lmpt + chr3L 16867596 intron Lmpt + chr3L 16867646 intron Lmpt + chr3L_5_16865001 chr3L_16865001 RAL-805 1101 chr3L 16945726 16945759 chr3L 16954879 16954912 roo 15 9151 3.5 1.0 2.2 4.7 9186 chr3L 16945726 exon Obp73a + chr3L 16950319 intergenic not near genes chr3L 16954912 5` UTR Nc73EF + chr3L_15_16950001 chr3L_16950001 RAL-805 1102 chr3L 17026800 17026823 chr3L 17026881 17026904 5 81 7.0 6.0 6.5 0.7 104 chr3L 17026800 exon Fit2 + chr3L 17026852 3` UTR Fit2 + chr3L 17026904 3` UTR Fit2 + chr3L_5_17025001 chr3L_17025001 RAL-805 1103 chr3L 17085013 17085037 chr3L 17094162 17094186 roo 11 9149 3.5 5.0 4.2 2.1 9173 chr3L 17085013 intron Rbp6 - chr3L 17089600 intron Rbp6 - chr3L 17094186 intron Rbp6 - chr3L_11_17085001 chr3L_17085001 RAL-805 1104 chr3L 17149163 17149185 chr3L 17149244 17149266 13 81 5.0 0.0 2.5 3.7 103 chr3L 17149163 intron Rbp6 - chr3L 17149214 intron Rbp6 - chr3L 17149266 intron Rbp6 - chr3L_13_17145001 chr3L_17145001 RAL-805 1105 chr3L 17272250 17272263 chr3L 17272383 17272396 4 133 0.5 2.5 1.5 1.6 146 chr3L 17272250 intergenic not near genes chr3L 17272323 intergenic not near genes chr3L 17272396 intergenic not near genes chr3L_4_17270001 chr3L_17270001 RAL-805 1106 chr3L 17332517 17332538 chr3L 17332684 17332704 4 166 4.0 0.0 2.0 1.3 187 chr3L 17332517 intergenic not near genes chr3L 17332610 intergenic not near genes chr3L 17332704 intergenic not near genes chr3L_4_17330001 chr3L_17330001 RAL-805 1107 chr3L 17367435 17367456 chr3L 17367529 17367550 11 94 3.0 2.5 2.8 2.9 115 chr3L 17367435 intergenic CR45688 +,Cad74A - chr3L 17367492 intergenic CR45688 +,Cad74A - chr3L 17367550 intergenic CR45688 +,Cad74A - chr3L_11_17365001 chr3L_17365001 RAL-805 1108 chr3L 17400148 17400180 chr3L 17400230 17400259 9 82 2.0 2.5 2.2 2.8 111 chr3L 17400148 intron blot - chr3L 17400204 intron blot - chr3L 17400259 intron blot - chr3L_9_17400001 chr3L_17400001 RAL-805 1109 chr3L 17510735 17510765 chr3L 17510819 17510826 11 82 2.0 1.5 1.8 3.9 91 chr3L 17510735 exon Oatp74D + chr3L 17510780 intron Oatp74D + chr3L 17510826 intron Oatp74D + chr3L_11_17510001 chr3L_17510001 RAL-805 1110 chr3L 17516986 17517011 chr3L 17524544 17524569 412 7 7557 3.5 7.5 5.5 1.1 7583 chr3L 17516986 intron CG7564 + chr3L 17520778 intron CG7564 + chr3L 17524569 3` UTR CG7564 + chr3L_7_17520001 chr3L_17520001 RAL-805 1111 chr3L 17538337 17538353 chr3L 17538418 17538433 4 77 4.0 3.5 3.8 0.8 96 chr3L 17538337 intron Nedd4 + chr3L 17538385 intron Nedd4 + chr3L 17538433 intron Nedd4 + chr3L_4_17535001 chr3L_17535001 RAL-805 1112 chr3L 17547593 17547615 chr3L 17547689 17547712 9 97 2.5 3.5 3.0 2.2 119 chr3L 17547593 intron Jon74E - chr3L 17547652 intron Jon74E - chr3L 17547712 intron Jon74E - chr3L_9_17545001 chr3L_17545001 RAL-805 1113 chr3L 17580587 17580606 chr3L 17580763 17580782 12 176 7.5 0.0 3.8 2.5 195 chr3L 17580587 intron Eip74EF - chr3L 17580684 intron Eip74EF - chr3L 17580782 intron Eip74EF - chr3L_12_17580001 chr3L_17580001 RAL-805 1114 chr3L 17594250 17594269 chr3L 17594331 17594350 4 81 1.0 6.0 3.5 0.9 100 chr3L 17594250 intron Eip74EF - chr3L 17594300 intron Eip74EF - chr3L 17594350 intron Eip74EF - chr3L_4_17590001 chr3L_17590001 RAL-805 1115 chr3L 17789847 17789874 chr3L 17789923 17789950 7 76 2.0 1.0 1.5 2.8 103 chr3L 17789847 intergenic not near genes chr3L 17789898 intergenic not near genes chr3L 17789950 intergenic not near genes chr3L_7_17785001 chr3L_17785001 RAL-805 1116 chr3L 17790604 17790633 chr3L 17790868 17790898 4 265 1.0 2.0 1.5 1.6 294 chr3L 17790604 intergenic CG42815 - chr3L 17790751 intergenic CG42815 - chr3L 17790898 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 RAL-805 1117 chr3L 17799830 17799836 chr3L 17801617 17801622 S-element 6 1787 1.0 1.0 1.0 3.0 1792 chr3L 17799830 intron NUCB1 - chr3L 17800726 intron NUCB1 - chr3L 17801622 intron NUCB1 - chr3L_6_17800001 chr3L_17800001 RAL-805 1118 chr3L 17837625 17837648 chr3L 17837713 17837734 12 87 4.0 3.0 3.5 2.7 109 chr3L 17837625 exon Grd + chr3L 17837680 intron Grd + chr3L 17837734 intron Grd + chr3L_12_17835001 chr3L_17835001 RAL-805 1119 chr3L 17906588 17906604 chr3L 17906689 17906704 5 101 1.5 2.5 2.0 1.7 116 chr3L 17906588 intron Prestin - chr3L 17906646 intron Prestin - chr3L 17906704 intron Prestin - chr3L_5_17905001 chr3L_17905001 RAL-805 1120 chr3L 17921891 17921893 chr3L 17921977 17921980 4 87 0.0 3.0 1.5 1.6 89 chr3L 17921891 intergenic not near genes chr3L 17921936 intergenic not near genes chr3L 17921980 intergenic not near genes chr3L_4_17920001 chr3L_17920001 RAL-805 1121 chr3L 17926073 17926090 chr3L 17926284 17926302 10 212 0.0 5.5 2.8 2.6 229 chr3L 17926073 intergenic not near genes chr3L 17926188 intergenic not near genes chr3L 17926302 intergenic not near genes chr3L_10_17925001 chr3L_17925001 RAL-805 1122 chr3L 17991575 17991589 chr3L 17991653 17991667 5 78 2.0 3.0 2.5 1.4 92 chr3L 17991575 intron Eip75B - chr3L 17991621 intron Eip75B - chr3L 17991667 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-805 1123 chr3L 18000678 18000707 chr3L 18000754 18000784 7 76 3.0 3.0 3.0 1.8 106 chr3L 18000678 intron Eip75B - chr3L 18000731 intron Eip75B - chr3L 18000784 intron Eip75B - chr3L_7_18000001 chr3L_18000001 RAL-805 1124 chr3L 18013978 18013995 chr3L 18014067 18014083 6 89 2.5 0.0 1.2 2.7 105 chr3L 18013978 intron Eip75B - chr3L 18014030 intron Eip75B - chr3L 18014083 intron Eip75B - chr3L_6_18010001 chr3L_18010001 RAL-805 1125 chr3L 18029973 18029983 chr3L 18030050 18030060 4 77 0.5 0.0 0.2 3.3 87 chr3L 18029973 intron Eip75B - chr3L 18030016 intron Eip75B - chr3L 18030060 intron Eip75B - chr3L_4_18030001 chr3L_18030001 RAL-805 1126 chr3L 18044524 18044541 chr3L 18044597 18044609 4 74 0.5 0.0 0.2 3.3 85 chr3L 18044524 intron Eip75B - chr3L 18044566 intron Eip75B - chr3L 18044609 intron Eip75B - chr3L_4_18040001 chr3L_18040001 RAL-805 1127 chr3L 18251756 18251776 chr3L 18251849 18251869 4 93 1.5 0.0 0.8 2.2 113 chr3L 18251756 intergenic CheA75a + chr3L 18251812 intergenic CheA75a + chr3L 18251869 intergenic CheA75a + chr3L_4_18250001 chr3L_18250001 RAL-805 1128 chr3L 18253700 18253715 chr3L 18253908 18253923 5 208 2.5 1.0 1.8 1.8 223 chr3L 18253700 intergenic not near genes chr3L 18253812 intergenic not near genes chr3L 18253923 intergenic not near genes chr3L_5_18250001 chr3L_18250001 RAL-805 1129 chr3L 18301352 18301378 chr3L 18301441 18301467 9 89 0.0 1.5 0.8 5.0 115 chr3L 18301352 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301467 intergenic CG13700 - chr3L_9_18300001 chr3L_18300001 RAL-805 1130 chr3L 18359595 18359630 chr3L 18359687 18359722 6 92 1.5 1.0 1.2 2.7 127 chr3L 18359595 intergenic not near genes chr3L 18359658 intergenic not near genes chr3L 18359722 intergenic not near genes chr3L_6_18355001 chr3L_18355001 RAL-805 1131 chr3L 18375992 18376011 chr3L 18376098 18376118 6 107 2.0 1.0 1.5 2.4 126 chr3L 18375992 intergenic not near genes chr3L 18376055 intergenic not near genes chr3L 18376118 intergenic not near genes chr3L_6_18375001 chr3L_18375001 RAL-805 1132 chr3L 18408737 18408760 chr3L 18408823 18408846 10 86 2.0 1.5 1.8 3.6 109 chr3L 18408737 intergenic not near genes chr3L 18408792 intergenic not near genes chr3L 18408846 intergenic not near genes chr3L_10_18405001 chr3L_18405001 RAL-805 1133 chr3L 18423098 18423116 chr3L 18423308 18423324 8 208 3.0 1.5 2.2 2.5 226 chr3L 18423098 intergenic not near genes chr3L 18423211 intergenic not near genes chr3L 18423324 intergenic not near genes chr3L_8_18420001 chr3L_18420001 RAL-805 1134 chr3L 18423117 18423120 chr3L 18423306 18423330 4 199 2.5 1.5 2.0 1.3 213 chr3L 18423117 intergenic not near genes chr3L 18423224 intergenic not near genes chr3L 18423330 intergenic not near genes chr3L_4_18420001 chr3L_18420001 RAL-805 1135 chr3L 18423121 18423124 chr3L 18423305 18423309 4 192 2.0 1.5 1.8 1.4 188 chr3L 18423121 intergenic not near genes chr3L 18423215 intergenic not near genes chr3L 18423309 intergenic not near genes chr3L_4_18420001 chr3L_18420001 RAL-805 1136 chr3L 18456277 18456297 chr3L 18456365 18456385 5 88 4.0 4.0 4.0 1.0 108 chr3L 18456277 intergenic CR44670 - chr3L 18456331 intergenic CR44670 - chr3L 18456385 intergenic CR44670 - chr3L_5_18455001 chr3L_18455001 RAL-805 1137 chr3L 18506131 18506156 chr3L 18509594 18509617 F-element 12 3461 4.5 1.0 2.8 3.2 3486 chr3L 18506131 intergenic not near genes chr3L 18507874 intergenic not near genes chr3L 18509617 intergenic not near genes chr3L_12_18505001 chr3L_18505001 RAL-805 1138 chr3L 18514909 18514934 chr3L 18520100 18520125 BS 6 5190 2.5 7.0 4.8 1.0 5216 chr3L 18514909 intergenic not near genes chr3L 18517517 intergenic not near genes chr3L 18520125 intergenic not near genes chr3L_6_18515001 chr3L_18515001 RAL-805 1139 chr3L 18528629 18528651 chr3L 18537790 18537812 roo 4 9161 1.0 1.0 1.0 2.0 9183 chr3L 18528629 intergenic not near genes chr3L 18533220 intergenic not near genes chr3L 18537812 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-805 1140 chr3L 18567029 18567055 chr3L 18567115 18567140 7 84 3.0 6.0 4.5 1.3 111 chr3L 18567029 intron AstC-R1 + chr3L 18567084 intron AstC-R1 + chr3L 18567140 intron AstC-R1 + chr3L_7_18565001 chr3L_18565001 RAL-805 1141 chr3L 18625369 18625395 chr3L 18625460 18625486 10 91 3.5 1.0 2.2 3.1 117 chr3L 18625369 intergenic not near genes chr3L 18625428 intergenic not near genes chr3L 18625486 intergenic MYPT-75D + chr3L_10_18625001 chr3L_18625001 RAL-805 1142 chr3L 18649645 18649659 chr3L 18650008 18650021 4 363 1.0 4.0 2.5 1.1 376 chr3L 18649645 intron MYPT-75D + chr3L 18649833 intron MYPT-75D + chr3L 18650021 intron MYPT-75D + chr3L_4_18645001 chr3L_18645001 RAL-805 1143 chr3L 18656945 18656977 chr3L 18657108 18657140 12 163 4.5 4.0 4.2 2.3 195 chr3L 18656945 intron MYPT-75D + chr3L 18657042 intron MYPT-75D + chr3L 18657140 intron MYPT-75D + chr3L_12_18655001 chr3L_18655001 RAL-805 1144 chr3L 18701130 18701163 chr3L 18701218 18701251 9 87 3.0 1.5 2.2 2.8 121 chr3L 18701130 intergenic not near genes chr3L 18701190 intergenic not near genes chr3L 18701251 intergenic not near genes chr3L_9_18700001 chr3L_18700001 RAL-805 1145 chr3L 18721773 18721805 chr3L 18721864 18721896 15 91 1.5 1.5 1.5 6.0 123 chr3L 18721773 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721896 3` UTR CG12477 - chr3L_15_18720001 chr3L_18720001 RAL-805 1146 chr3L 18729919 18729943 chr3L 18729996 18730010 8 73 0.5 2.0 1.2 3.6 91 chr3L 18729919 intergenic not near genes chr3L 18729964 intergenic not near genes chr3L 18730010 intergenic not near genes chr3L_8_18725001 chr3L_18725001 RAL-805 1147 chr3L 18772408 18772441 chr3L 18781089 18781122 roo 9 8681 2.0 3.5 2.8 2.4 8714 chr3L 18772408 intron ftz-f1 - chr3L 18776765 intron ftz-f1 - chr3L 18781122 intron ftz-f1 - chr3L_9_18775001 chr3L_18775001 RAL-805 1148 chr3L 18792579 18792603 chr3L 18792660 18792685 7 81 2.0 2.5 2.2 2.2 106 chr3L 18792579 intron ftz-f1 - chr3L 18792632 intron ftz-f1 - chr3L 18792685 intron ftz-f1 - chr3L_7_18790001 chr3L_18790001 RAL-805 1149 chr3L 18833777 18833807 chr3L 18834941 18834971 1360 6 1164 2.0 2.0 2.0 2.0 1194 chr3L 18833777 intron Indy - chr3L 18834374 intron Indy - chr3L 18834971 intron Indy - chr3L_6_18830001 chr3L_18830001 RAL-805 1150 chr3L 18838526 18838539 chr3L 18838607 18838619 7 81 2.5 2.0 2.2 2.2 93 chr3L 18838526 intron Indy - chr3L 18838572 intron Indy - chr3L 18838619 intron Indy - chr3L_7_18835001 chr3L_18835001 RAL-805 1151 chr3L 18839736 18839765 chr3L 18839819 18839848 16 83 2.5 3.5 3.0 4.0 112 chr3L 18839736 intron Indy - chr3L 18839792 intron Indy - chr3L 18839848 intron Indy - chr3L_16_18835001 chr3L_18835001 RAL-805 1152 chr3L 18887300 18887329 chr3L 18887406 18887434 10 106 2.5 0.5 1.5 4.0 134 chr3L 18887300 intron CG3961 - chr3L 18887367 intron CG3961 - chr3L 18887434 intron CG3961 - chr3L_10_18885001 chr3L_18885001 RAL-805 1153 chr3L 18933624 18933639 chr3L 18933718 18933733 5 94 1.5 1.5 1.5 2.0 109 chr3L 18933624 intron CG32204 - chr3L 18933678 intron CG32204 - chr3L 18933733 intron CG32204 - chr3L_5_18930001 chr3L_18930001 RAL-805 1154 chr3L 18935851 18935863 chr3L 18935940 18935952 4 89 1.0 2.5 1.8 1.4 101 chr3L 18935851 intron CG32204 - chr3L 18935902 intron CG32204 - chr3L 18935952 intron CG32204 - chr3L_4_18935001 chr3L_18935001 RAL-805 1155 chr3L 18952412 18952439 chr3L 18952492 18952519 12 79 1.5 3.5 2.5 3.4 107 chr3L 18952412 intron CG6836 + chr3L 18952466 intron CG6836 + chr3L 18952519 intron CG6836 + chr3L_12_18950001 chr3L_18950001 RAL-805 1156 chr3L 18959130 18959153 chr3L 18959229 18959243 5 96 5.0 6.5 5.8 0.7 113 chr3L 18959130 intergenic not near genes chr3L 18959186 intergenic not near genes chr3L 18959243 intergenic not near genes chr3L_5_18955001 chr3L_18955001 RAL-805 1157 chr3L 18965011 18965039 chr3L 18965110 18965138 12 98 2.5 4.0 3.2 2.9 127 chr3L 18965011 intergenic not near genes chr3L 18965074 intergenic not near genes chr3L 18965138 intergenic not near genes chr3L_12_18965001 chr3L_18965001 RAL-805 1158 chr3L 18969597 18969623 chr3L 18969693 18969719 6 90 3.5 4.5 4.0 1.2 122 chr3L 18969597 intergenic not near genes chr3L 18969658 intergenic not near genes chr3L 18969719 intergenic not near genes chr3L_6_18965001 chr3L_18965001 RAL-805 1159 chr3L 19008833 19008871 chr3L 19009176 19009209 jockey 5 339 0.0 1.0 0.5 3.3 376 chr3L 19008833 intron nkd - chr3L 19009021 intron nkd - chr3L 19009209 intron nkd - chr3L_5_19005001 chr3L_19005001 RAL-805 1160 chr3L 19018827 19018845 chr3L 19018918 19018936 6 91 3.0 1.5 2.2 1.9 109 chr3L 19018827 intron nkd - chr3L 19018882 intron nkd - chr3L 19018936 intron nkd - chr3L_6_19015001 chr3L_19015001 RAL-805 1161 chr3L 19115634 19115667 chr3L 19115814 19115847 BS 8 180 4.5 4.5 4.5 1.5 213 chr3L 19115634 intron CG14082 - chr3L 19115740 intron CG14082 - chr3L 19115847 intron CG14082 - chr3L_8_19115001 chr3L_19115001 RAL-805 1162 chr3L 19117053 19117067 chr3L 19124488 19124514 mdg1 9 7443 4.0 3.5 3.8 1.9 7461 chr3L 19117053 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124514 intron CG14082 - chr3L_9_19120001 chr3L_19120001 RAL-805 1163 chr3L 19208058 19208090 chr3L 19209432 19209462 Doc 13 1373 1.5 2.0 1.8 4.6 1404 chr3L 19208058 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209462 intron fz2 - chr3L_13_19205001 chr3L_19205001 RAL-805 1164 chr3L 19228400 19228433 chr3L 19228493 19228526 12 92 1.5 1.0 1.2 5.5 126 chr3L 19228400 intron fz2 - chr3L 19228463 intron fz2 - chr3L 19228526 intron fz2 - chr3L_12_19225001 chr3L_19225001 RAL-805 1165 chr3L 19248848 19248879 chr3L 19248938 19248969 5 90 1.0 3.0 2.0 1.7 121 chr3L 19248848 intergenic not near genes chr3L 19248908 intergenic not near genes chr3L 19248969 intergenic not near genes chr3L_5_19245001 chr3L_19245001 RAL-805 1166 chr3L 19269819 19269849 chr3L 19270023 19270053 10 203 2.0 3.5 2.8 2.6 234 chr3L 19269819 intron,exon CG14085 +,CG14088 - chr3L 19269936 intron,exon CG14085 +,CG14088 - chr3L 19270053 intron,exon CG14085 +,CG14088 - chr3L_10_19265001 chr3L_19265001 RAL-805 1167 chr3L 19335738 19335771 chr3L 19335825 19335858 8 87 2.5 0.5 1.5 3.2 120 chr3L 19335738 intron pip - chr3L 19335798 intron pip - chr3L 19335858 intron pip - chr3L_8_19335001 chr3L_19335001 RAL-805 1168 chr3L 19342763 19342776 chr3L 19342854 19342867 5 91 2.5 0.0 1.2 2.3 104 chr3L 19342763 3` UTR CG32206 - chr3L 19342815 3` UTR CG32206 - chr3L 19342867 3` UTR CG32206 - chr3L_5_19340001 chr3L_19340001 RAL-805 1169 chr3L 19357478 19357504 chr3L 19357807 19357833 10 329 4.0 3.5 3.8 2.1 355 chr3L 19357478 intron CG32206 - chr3L 19357656 intron CG32206 - chr3L 19357833 intron CG32206 - chr3L_10_19355001 chr3L_19355001 RAL-805 1170 chr3L 19404976 19405005 chr3L 19405053 19405082 8 75 2.5 4.0 3.2 1.9 106 chr3L 19404976 intron CG32206 - chr3L 19405029 intron CG32206 - chr3L 19405082 intron CG32206 - chr3L_8_19405001 chr3L_19405001 RAL-805 1171 chr3L 19426757 19426781 chr3L 19426831 19426854 6 74 2.5 6.0 4.2 1.2 97 chr3L 19426757 intergenic not near genes chr3L 19426806 intergenic not near genes chr3L 19426854 intergenic not near genes chr3L_6_19425001 chr3L_19425001 RAL-805 1172 chr3L 19527922 19527955 chr3L 19528001 19528034 10 76 3.0 2.5 2.8 2.6 112 chr3L 19527922 intergenic not near genes chr3L 19527978 intergenic not near genes chr3L 19528034 intergenic not near genes chr3L_10_19525001 chr3L_19525001 RAL-805 1173 chr3L 19848502 19848534 chr3L 19857692 19857720 roo 8 9189 3.5 2.0 2.8 2.1 9218 chr3L 19848502 intron Papss + chr3L 19853111 intron Papss + chr3L 19857720 intron Papss + chr3L_8_19850001 chr3L_19850001 RAL-805 1174 chr3L 19861829 19861852 chr3L 19863617 19863640 S-element 5 1785 3.0 4.0 3.5 1.1 1811 chr3L 19861829 5` UTR CR45433 + chr3L 19862734 intergenic not near genes chr3L 19863640 intergenic not near genes chr3L_5_19860001 chr3L_19860001 RAL-805 1175 chr3L 19981210 19981233 chr3L 19981290 19981313 7 80 1.0 2.0 1.5 2.8 103 chr3L 19981210 intergenic CG17732 + chr3L 19981262 intergenic CG17732 + chr3L 19981313 intergenic CG17732 + chr3L_7_19980001 chr3L_19980001 RAL-805 1176 chr3L 20086792 20086818 chr3L 20086870 20086896 4 78 4.5 2.0 3.2 1.0 104 chr3L 20086792 intron sNPF-R - chr3L 20086844 intron sNPF-R - chr3L 20086896 intron sNPF-R - chr3L_4_20085001 chr3L_20085001 RAL-805 1177 chr3L 20113673 20113691 chr3L 20122930 20122948 roo 5 9257 0.0 2.0 1.0 2.5 9275 chr3L 20113673 intergenic not near genes chr3L 20118310 intergenic not near genes chr3L 20122948 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RAL-805 1178 chr3L 20143080 20143116 chr3L 20143160 20143189 10 77 1.5 5.5 3.5 2.2 109 chr3L 20143080 intergenic not near genes chr3L 20143134 intergenic not near genes chr3L 20143189 intergenic not near genes chr3L_10_20140001 chr3L_20140001 RAL-805 1179 chr3L 20148292 20148317 chr3L 20148382 20148407 10 90 1.0 5.5 3.2 2.4 115 chr3L 20148292 intergenic not near genes chr3L 20148350 intergenic not near genes chr3L 20148407 intergenic not near genes chr3L_10_20145001 chr3L_20145001 RAL-805 1180 chr3L 20257336 20257360 chr3L 20258456 20258480 pogo 10 1120 2.0 2.5 2.2 3.1 1144 chr3L 20257336 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258480 intron rdgC + chr3L_10_20255001 chr3L_20255001 RAL-805 1181 chr3L 20283676 20283708 chr3L 20283760 20283792 10 84 2.0 3.0 2.5 2.9 116 chr3L 20283676 intron gogo - chr3L 20283734 intron gogo - chr3L 20283792 intron gogo - chr3L_10_20280001 chr3L_20280001 RAL-805 1182 chr3L 20315655 20315681 chr3L 20315735 20315761 14 78 0.5 3.0 1.8 5.0 106 chr3L 20315655 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315708 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315761 3` UTR,intron alphaSnap +,CR43875 - chr3L_14_20315001 chr3L_20315001 RAL-805 1183 chr3L 20386939 20386971 chr3L 20387041 20387072 10 102 1.0 3.0 2.0 3.3 133 chr3L 20386939 intron fbl + chr3L 20387006 intron fbl + chr3L 20387072 intron fbl + chr3L_10_20385001 chr3L_20385001 RAL-805 1184 chr3L 20476757 20476763 chr3L 20484355 20484362 springer 4 7599 6.0 2.0 4.0 0.8 7605 chr3L 20476757 3` UTR isoQC + chr3L 20480560 intergenic not near genes chr3L 20484362 3` UTR ZnT77C - chr3L_4_20480001 chr3L_20480001 RAL-805 1185 chr3L 20476764 20476786 chr3L 20484354 20484385 springer 8 7598 1.0 2.0 1.5 3.2 7621 chr3L 20476764 3` UTR isoQC + chr3L 20480574 intergenic not near genes chr3L 20484385 3` UTR ZnT77C - chr3L_8_20480001 chr3L_20480001 RAL-805 1186 chr3L 20508168 20508186 chr3L 20508260 20508287 8 100 3.0 2.0 2.5 2.3 119 chr3L 20508168 intron CG32425 + chr3L 20508228 intron CG32425 + chr3L 20508287 intron CG32425 + chr3L_8_20505001 chr3L_20505001 RAL-805 1187 chr3L 20548368 20548388 chr3L 20548454 20548477 8 87 2.5 3.5 3.0 2.0 109 chr3L 20548368 intergenic not near genes chr3L 20548422 intergenic not near genes chr3L 20548477 intergenic not near genes chr3L_8_20545001 chr3L_20545001 RAL-805 1188 chr3L 20585410 20585437 chr3L 20585498 20585526 11 89 3.5 2.0 2.8 2.9 116 chr3L 20585410 intergenic not near genes chr3L 20585468 intergenic not near genes chr3L 20585526 intergenic not near genes chr3L_11_20585001 chr3L_20585001 RAL-805 1189 chr3L 20616152 20616176 chr3L 20616354 20616378 6 202 0.5 3.0 1.8 2.1 226 chr3L 20616152 intron knrl - chr3L 20616265 intron knrl - chr3L 20616378 intron knrl - chr3L_6_20615001 chr3L_20615001 RAL-805 1190 chr3L 20683262 20683279 chr3L 20683954 20683971 6 692 3.0 3.0 3.0 1.5 709 chr3L 20683262 intergenic not near genes chr3L 20683616 intergenic not near genes chr3L 20683971 intergenic not near genes chr3L_6_20680001 chr3L_20680001 RAL-805 1191 chr3L 20733812 20733837 chr3L 20733898 20733923 8 86 3.0 3.5 3.2 1.9 111 chr3L 20733812 intron CG13252 + chr3L 20733868 intron CG13252 + chr3L 20733923 intron CG13252 + chr3L_8_20730001 chr3L_20730001 RAL-805 1192 chr3L 20821285 20821306 chr3L 20824896 20824917 NOF 7 3611 0.5 3.0 1.8 2.5 3632 chr3L 20821285 intron Pka-R1 + chr3L 20823101 intron Pka-R1 + chr3L 20824917 intron Pka-R1 + chr3L_7_20820001 chr3L_20820001 RAL-805 1193 chr3L 20849280 20849300 chr3L 20849359 20849379 7 79 2.0 2.0 2.0 2.3 99 chr3L 20849280 intron CG32432 - chr3L 20849330 intron CG32432 - chr3L 20849379 intron CG32432 - chr3L_7_20845001 chr3L_20845001 RAL-805 1194 chr3L 20861712 20861738 chr3L 20861794 20861821 12 82 7.0 5.0 6.0 1.7 109 chr3L 20861712 intron CG32432 - chr3L 20861766 intron CG32432 - chr3L 20861821 intron CG32432 - chr3L_12_20860001 chr3L_20860001 RAL-805 1195 chr3L 20921888 20921902 chr3L 20921987 20922001 4 98 6.0 2.5 4.2 0.8 113 chr3L 20921888 intergenic CR43929 - chr3L 20921944 intergenic CR43929 - chr3L 20922001 intergenic CR43929 - chr3L_4_20920001 chr3L_20920001 RAL-805 1196 chr3L 21071317 21071347 chr3L 21071480 21071510 5 163 0.5 1.0 0.8 2.8 193 chr3L 21071317 intron siz + chr3L 21071414 intron siz + chr3L 21071510 intron siz + chr3L_5_21070001 chr3L_21070001 RAL-805 1197 chr3L 21082215 21082239 chr3L 21082292 21082317 7 77 1.5 3.0 2.2 2.2 102 chr3L 21082215 intron ko - chr3L 21082266 intron ko - chr3L 21082317 intron ko - chr3L_7_21080001 chr3L_21080001 RAL-805 1198 chr3L 21151862 21151893 chr3L 21156946 21156977 flea 7 5084 2.0 0.0 1.0 3.5 5115 chr3L 21151862 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21156977 intron Ac78C - chr3L_7_21150001 chr3L_21150001 RAL-805 1199 chr3L 21160968 21160992 chr3L 21161064 21161088 11 96 3.0 4.0 3.5 2.4 120 chr3L 21160968 5` UTR Ac78C - chr3L 21161028 intron Ac78C - chr3L 21161088 intron Ac78C - chr3L_11_21160001 chr3L_21160001 RAL-805 1200 chr3L 21163245 21163273 chr3L 21163320 21163329 4 74 1.0 0.5 0.8 2.2 84 chr3L 21163245 intron Ac78C - chr3L 21163287 intron Ac78C - chr3L 21163329 intron Ac78C - chr3L_4_21160001 chr3L_21160001 RAL-805 1201 chr3L 21306149 21306168 chr3L 21315308 21315327 roo 6 9159 3.5 1.0 2.2 1.9 9178 chr3L 21306149 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310738 intron Pc - chr3L 21315327 3` UTR Pc - chr3L_6_21310001 chr3L_21310001 RAL-805 1202 chr3L 21361731 21361753 chr3L 21362685 21362707 G2 12 954 2.0 1.0 1.5 4.8 976 chr3L 21361731 intergenic not near genes chr3L 21362219 intergenic not near genes chr3L 21362707 intergenic not near genes chr3L_12_21360001 chr3L_21360001 RAL-805 1203 chr3L 21395141 21395171 chr3L 21395229 21395259 9 88 6.0 3.0 4.5 1.6 118 chr3L 21395141 intron rgn + chr3L 21395200 intron rgn + chr3L 21395259 intron rgn + chr3L_9_21395001 chr3L_21395001 RAL-805 1204 chr3L 21407004 21407028 chr3L 21407082 21407107 4 78 3.0 3.5 3.2 1.0 103 chr3L 21407004 intron rgn + chr3L 21407056 intron rgn + chr3L 21407107 intron rgn + chr3L_4_21405001 chr3L_21405001 RAL-805 1205 chr3L 21427864 21427882 chr3L 21427942 21427975 9 91 0.5 4.0 2.2 2.8 111 chr3L 21427864 intron,5` UTR barc -,CG33288 + chr3L 21427920 intron,5` UTR barc -,CG33288 + chr3L 21427975 intron,5` UTR barc -,CG33288 + chr3L_9_21425001 chr3L_21425001 RAL-805 1206 chr3L 21498833 21498869 chr3L 21500468 21500492 1360 10 1634 4.5 5.0 4.8 1.7 1659 chr3L 21498833 intron Glg1 - chr3L 21499662 intron Glg1 - chr3L 21500492 intron Glg1 - chr3L_10_21495001 chr3L_21495001 RAL-805 1207 chr3L 21530414 21530449 chr3L 21530499 21530511 12 83 0.5 3.5 2.0 4.0 97 chr3L 21530414 3` UTR Mkrn1 - chr3L 21530462 3` UTR Mkrn1 - chr3L 21530511 3` UTR Mkrn1 - chr3L_12_21530001 chr3L_21530001 RAL-805 1208 chr3L 21613378 21613393 chr3L 21613455 21613464 8 76 2.5 1.5 2.0 2.7 86 chr3L 21613378 intergenic TfAP-2 +,S1P - chr3L 21613421 intergenic TfAP-2 +,S1P - chr3L 21613464 intergenic TfAP-2 +,S1P - chr3L_8_21610001 chr3L_21610001 RAL-805 1209 chr3L 21749316 21749350 chr3L 21754476 21754509 Doc 9 5157 3.5 8.0 5.8 1.3 5193 chr3L 21749316 intron Syn1 - chr3L 21751912 intron Syn1 - chr3L 21754509 intron Syn1 - chr3L_9_21750001 chr3L_21750001 RAL-805 1210 chr3L 21769063 21769312 chr3L 21769149 21769424 9 106 4.0 3.5 3.8 1.9 361 chr3L 21769063 intron,intron Syn1 -,CG42689 + chr3L 21769244 intron,intron Syn1 -,CG42689 + chr3L 21769424 intron,intron Syn1 -,CG42689 + chr3L_9_21765001 chr3L_21765001 RAL-805 1211 chr3L 21849500 21849530 chr3L 21849582 21849612 10 82 2.5 2.5 2.5 2.9 112 chr3L 21849500 intron mub + chr3L 21849556 intron mub + chr3L 21849612 intron mub + chr3L_10_21845001 chr3L_21845001 RAL-805 1212 chr3L 21905338 21905363 chr3L 21905415 21905443 12 79 6.5 5.0 5.8 1.8 105 chr3L 21905338 intron mub + chr3L 21905390 intron mub + chr3L 21905443 intron mub + chr3L_12_21905001 chr3L_21905001 RAL-805 1213 chr3L 22023221 22023249 chr3L 22023312 22023312 12 89 3.5 1.0 2.2 3.8 91 chr3L 22023221 intergenic not near genes chr3L 22023266 intergenic not near genes chr3L 22023312 intergenic not near genes chr3L_12_22020001 chr3L_22020001 RAL-805 1214 chr3L 22099687 22099702 chr3L 22105873 22105888 3S18 5 6186 2.0 4.0 3.0 1.2 6201 chr3L 22099687 intergenic not near genes chr3L 22102788 intergenic not near genes chr3L 22105888 intergenic not near genes chr3L_5_22100001 chr3L_22100001 RAL-805 1215 chr3L 22124947 22124982 chr3L 22125103 22125138 13 156 4.5 2.0 3.2 3.1 191 chr3L 22124947 intergenic not near genes chr3L 22125042 intergenic not near genes chr3L 22125138 intergenic not near genes chr3L_13_22125001 chr3L_22125001 RAL-805 1216 chr3L 22137524 22137552 chr3L 22137601 22137629 5 74 2.0 2.5 2.2 1.6 105 chr3L 22137524 intron olf413 + chr3L 22137576 intron olf413 + chr3L 22137629 intron olf413 + chr3L_5_22135001 chr3L_22135001 RAL-805 1217 chr3L 22231585 22231592 chr3L 22231675 22231682 4 90 6.0 5.0 5.5 0.6 97 chr3L 22231585 intron olf413 + chr3L 22231634 intron olf413 + chr3L 22231682 intron olf413 + chr3L_4_22230001 chr3L_22230001 RAL-805 1218 chr3L 22233937 22233951 chr3L 22235018 22235044 5 1082 4.5 1.5 3.0 1.2 1107 chr3L 22233937 intron olf413 + chr3L 22234490 intron olf413 + chr3L 22235044 intron olf413 + chr3L_5_22230001 chr3L_22230001 RAL-805 1219 chr3L 22441127 22441149 chr3L 22441229 22441251 4 102 2.5 4.5 3.5 0.9 124 chr3L 22441127 intergenic not near genes chr3L 22441189 intergenic not near genes chr3L 22441251 intergenic not near genes chr3L_4_22440001 chr3L_22440001 RAL-805 1220 chr3L 22546216 22546231 chr3L 22546295 22546310 5 79 3.5 2.5 3.0 1.2 94 chr3L 22546216 intergenic not near genes chr3L 22546263 intergenic not near genes chr3L 22546310 intergenic not near genes chr3L_5_22545001 chr3L_22545001 RAL-805 1221 chr3L 22555773 22555783 chr3L 22563242 22563242 blood 4 7467 4.5 1.5 3.0 1.0 7469 chr3L 22555773 intergenic not near genes chr3L 22559508 intergenic not near genes chr3L 22563242 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-805 1222 chr3L 22570428 22570455 chr3L 22570572 22570599 13 143 2.5 5.0 3.8 2.7 171 chr3L 22570428 intergenic not near genes chr3L 22570514 intergenic not near genes chr3L 22570599 intergenic not near genes chr3L_13_22570001 chr3L_22570001 RAL-805 1223 chr3L 22577628 22577653 chr3L 22582404 22582421 Doc 10 4783 1.5 3.5 2.5 2.9 4793 chr3L 22577628 intergenic not near genes chr3L 22580024 intergenic not near genes chr3L 22582421 3` UTR CG14459 - chr3L_10_22580001 chr3L_22580001 RAL-805 1224 chr3L 22617197 22617222 chr3L 22624644 22624673 blood 9 7450 4.0 1.5 2.8 2.4 7476 chr3L 22617197 intron CG14459 - chr3L 22620935 intron CG14459 - chr3L 22624673 intron CG14459 - chr3L_9_22620001 chr3L_22620001 RAL-805 1225 chr3L 22635150 22635170 chr3L 22635268 22635286 8 124 3.0 1.5 2.2 2.5 136 chr3L 22635150 intron CG14459 - chr3L 22635218 intron CG14459 - chr3L 22635286 intron CG14459 - chr3L_8_22635001 chr3L_22635001 RAL-805 1226 chr3L 22678083 22678111 chr3L 22678168 22678204 12 87 1.0 2.0 1.5 4.8 121 chr3L 22678083 intron CG14457 + chr3L 22678144 intron CG14457 + chr3L 22678204 intron CG14457 + chr3L_12_22675001 chr3L_22675001 RAL-805 1227 chr3L 22761390 22761413 chr3L 22766823 22766828 Ivk 9 5431 2.0 4.5 3.2 2.1 5438 chr3L 22761390 intron SPoCk + chr3L 22764109 intron SPoCk + chr3L 22766828 intron SPoCk + chr3L_9_22760001 chr3L_22760001 RAL-805 1228 chr3L 22838584 22838619 chr3L 22838665 22838698 13 81 2.5 2.5 2.5 3.7 114 chr3L 22838584 intergenic CG11226 + chr3L 22838641 intergenic CG11226 + chr3L 22838698 intergenic not near genes chr3L_13_22835001 chr3L_22835001 RAL-805 1229 chr3L 22853468 22853714 chr3L 22853555 22853800 15 84 4.5 4.0 4.2 2.9 332 chr3L 22853468 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853634 5` UTR CR43426 + chr3L 22853800 5` UTR CR43426 + chr3L_15_22850001 chr3L_22850001 RAL-805 1230 chr3L 22865984 22866010 chr3L 22867117 22867143 Doc 12 1132 4.0 3.0 3.5 2.7 1159 chr3L 22865984 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867143 intron CG33170 + chr3L_12_22865001 chr3L_22865001 RAL-805 1231 chr3L 22897195 22897221 chr3L 22897277 22897304 14 83 2.5 3.0 2.8 3.7 109 chr3L 22897195 intergenic not near genes chr3L 22897250 intergenic not near genes chr3L 22897304 intergenic not near genes chr3L_14_22895001 chr3L_22895001 RAL-805 1232 chr3L 22966420 22966452 chr3L 22966644 22966676 5 224 2.5 1.0 1.8 1.8 256 chr3L 22966420 intergenic not near genes chr3L 22966548 intergenic not near genes chr3L 22966676 intergenic not near genes chr3L_5_22965001 chr3L_22965001 RAL-805 1233 chr3L 22989864 22989892 chr3L 22996834 22996866 297 7 6971 3.0 3.0 3.0 1.8 7002 chr3L 22989864 intergenic not near genes chr3L 22993365 intergenic not near genes chr3L 22996866 intergenic not near genes chr3L_7_22990001 chr3L_22990001 RAL-805 1234 chr3L 23182261 23182294 chr3L 23182373 23182386 12 111 4.5 1.5 3.0 3.0 125 chr3L 23182261 intron CG34031 + chr3L 23182324 intron CG34031 + chr3L 23182386 intron CG34031 + chr3L_12_23180001 chr3L_23180001 RAL-805 1235 chr3L 23205448 23205454 chr3L 23205677 23205684 6 230 12.0 5.0 8.5 0.6 236 chr3L 23205448 intergenic not near genes chr3L 23205566 intergenic not near genes chr3L 23205684 intergenic not near genes chr3L_6_23205001 chr3L_23205001 RAL-805 1236 chr3L 23470373 23470397 chr3L 23470627 23470648 4 252 2.5 4.5 3.5 0.9 275 chr3L 23470373 intergenic not near genes chr3L 23470510 intergenic not near genes chr3L 23470648 intergenic not near genes chr3L_4_23470001 chr3L_23470001 RAL-805 1237 chr3L 24012407 24012434 chr3L 24020748 24020775 roo 10 8341 3.5 1.0 2.2 3.1 8368 chr3L 24012407 intergenic not near genes chr3L 24016591 intergenic not near genes chr3L 24020775 intergenic not near genes chr3L_10_24015001 chr3L_24015001 RAL-805 1238 chr3L 24168160 24168192 chr3L 24168245 24168277 12 84 2.5 3.5 3.0 3.0 117 chr3L 24168160 intron Snap25 + chr3L 24168218 intron Snap25 + chr3L 24168277 intron Snap25 + chr3L_12_24165001 chr3L_24165001 RAL-805 1239 chr3L 24168792 24168810 chr3L 24176120 24176120 ZAM 4 7324 5.5 4.0 4.8 0.7 7328 chr3L 24168792 intron Snap25 + chr3L 24172456 intron Snap25 + chr3L 24176120 intron Snap25 + chr3L_4_24170001 chr3L_24170001 RAL-805 1240 chr3L 24324298 24324326 chr3L 24324392 24324420 5 92 0.5 1.0 0.8 2.8 122 chr3L 24324298 intergenic not near genes chr3L 24324359 intergenic not near genes chr3L 24324420 intergenic nvd + chr3L_5_24320001 chr3L_24320001 RAL-805 1241 chr3L 27390690 27390711 chr3L 27390767 27390790 8 78 23.5 25.0 24.2 0.3 100 chr3L 27390690 intron Dbp80 + chr3L 27390740 intron Dbp80 + chr3L 27390790 intron Dbp80 + chr3L_8_27390001 chr3L_27390001 RAL-805 1242 chr3R 2534137 2534166 chr3R 2541706 2541734 6 7563 8.0 13.0 10.5 0.5 7597 chr3R 2534137 intergenic not near genes chr3R 2537936 intergenic not near genes chr3R 2541734 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-805 1243 chr3R 2556881 2556902 chr3R 2557614 2557635 5 733 15.0 10.0 12.5 0.4 754 chr3R 2556881 intron CG41056 - chr3R 2557258 intron CG41056 - chr3R 2557635 intron CG41056 - chr3R_5_2555001 chr3R_2555001 RAL-805 1244 chr3R 4206070 4206103 chr3R 4211644 4211678 mdg3 9 5575 2.5 1.0 1.8 3.2 5608 chr3R 4206070 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211678 intron CG14636 - chr3R_9_4205001 chr3R_4205001 RAL-805 1245 chr3R 4366757 4366790 chr3R 4375140 4375173 roo 6 8382 1.0 2.0 1.5 2.4 8416 chr3R 4366757 3` UTR CG1090 + chr3R 4370965 intergenic not near genes chr3R 4375173 5` UTR CR44922 + chr3R_6_4370001 chr3R_4370001 RAL-805 1246 chr3R 4408411 4408441 chr3R 4412714 4412745 Juan 12 4304 3.0 3.0 3.0 3.0 4334 chr3R 4408411 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412745 intron CG32944 - chr3R_12_4410001 chr3R_4410001 RAL-805 1247 chr3R 4554558 4554590 chr3R 4554899 4554931 6 339 2.5 2.0 2.2 1.9 373 chr3R 4554558 intron CG34357 - chr3R 4554744 intron CG34357 - chr3R 4554931 intron CG34357 - chr3R_6_4550001 chr3R_4550001 RAL-805 1248 chr3R 4722354 4722371 chr3R 4722483 4722505 4 134 2.0 3.0 2.5 1.1 151 chr3R 4722354 intron Nep2 - chr3R 4722430 intron Nep2 - chr3R 4722505 intron Nep2 - chr3R_4_4720001 chr3R_4720001 RAL-805 1249 chr3R 4753239 4753273 chr3R 4757542 4757551 F-element 6 4295 4.0 1.5 2.8 1.6 4312 chr3R 4753239 intron,intron atms +,CG44098 - chr3R 4755395 intron,intron atms +,CG44098 - chr3R 4757551 intron,exon atms +,CG44098 - chr3R_6_4755001 chr3R_4755001 RAL-805 1250 chr3R 4887483 4887500 chr3R 4894857 4894877 rover 4 7376 7.0 2.0 4.5 0.7 7394 chr3R 4887483 intergenic not near genes chr3R 4891180 intergenic not near genes chr3R 4894877 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-805 1251 chr3R 4896293 4896325 chr3R 4896386 4896418 6 93 1.5 1.0 1.2 2.7 125 chr3R 4896293 intergenic CR45580 + chr3R 4896356 intergenic CR45580 + chr3R 4896418 5` UTR CR45580 + chr3R_6_4895001 chr3R_4895001 RAL-805 1252 chr3R 4948379 4948390 chr3R 4949001 4949012 5 621 12.0 20.0 16.0 0.3 633 chr3R 4948379 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949012 3` UTR UbcD6 - chr3R_5_4945001 chr3R_4945001 RAL-805 1253 chr3R 4966010 4966035 chr3R 4966102 4966110 5 88 2.5 5.0 3.8 1.0 100 chr3R 4966010 intron CG1124 + chr3R 4966060 intron CG1124 + chr3R 4966110 intron CG1124 + chr3R_5_4965001 chr3R_4965001 RAL-805 1254 chr3R 5045845 5045868 chr3R 5052946 5052970 HMS-Beagle 8 7102 3.0 0.5 1.8 2.9 7125 chr3R 5045845 intron CR43635 - chr3R 5049408 intergenic not near genes chr3R 5052970 intergenic CR45588 - chr3R_8_5045001 chr3R_5045001 RAL-805 1255 chr3R 5067986 5068012 chr3R 5073503 5073529 mdg3 6 5516 3.5 6.5 5.0 1.0 5543 chr3R 5067986 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073529 intergenic not near genes chr3R_6_5070001 chr3R_5070001 RAL-805 1256 chr3R 5133146 5133165 chr3R 5133259 5133279 8 114 1.5 0.5 1.0 4.0 133 chr3R 5133146 intergenic not near genes chr3R 5133212 intergenic not near genes chr3R 5133279 intergenic not near genes chr3R_8_5130001 chr3R_5130001 RAL-805 1257 chr3R 5193901 5193919 chr3R 5194018 5194021 10 114 5.5 2.0 3.8 2.1 120 chr3R 5193901 intron cno - chr3R 5193961 intron cno - chr3R 5194021 intron cno - chr3R_10_5190001 chr3R_5190001 RAL-805 1258 chr3R 5193927 5193930 chr3R 5194015 5194047 4 100 3.5 1.0 2.2 1.2 120 chr3R 5193927 intron cno - chr3R 5193987 intron cno - chr3R 5194047 intron cno - chr3R_4_5190001 chr3R_5190001 RAL-805 1259 chr3R 5338400 5338429 chr3R 5343571 5343606 Rt1c 10 5176 1.5 9.0 5.2 1.6 5206 chr3R 5338400 intron mtd - chr3R 5341003 intron mtd - chr3R 5343606 intron mtd - chr3R_10_5340001 chr3R_5340001 RAL-805 1260 chr3R 5351906 5351934 chr3R 5352902 5352930 5 996 23.0 29.5 26.2 0.2 1024 chr3R 5351906 intergenic not near genes chr3R 5352418 intergenic not near genes chr3R 5352930 intergenic not near genes chr3R_5_5350001 chr3R_5350001 RAL-805 1261 chr3R 5376752 5376782 chr3R 5376839 5376870 12 88 3.5 4.0 3.8 2.5 118 chr3R 5376752 intergenic 7B2 +,CG14667 + chr3R 5376811 5` UTR 7B2 + chr3R 5376870 5` UTR 7B2 + chr3R_12_5375001 chr3R_5375001 RAL-805 1262 chr3R 5385973 5386007 chr3R 5386143 5386172 8 170 2.5 4.0 3.2 1.9 199 chr3R 5385973 intron kkv - chr3R 5386072 intron kkv - chr3R 5386172 intron kkv - chr3R_8_5385001 chr3R_5385001 RAL-805 1263 chr3R 5445965 5445993 chr3R 5452425 5452449 Burdock 6 6459 1.5 6.5 4.0 1.2 6484 chr3R 5445965 intron CG14669 + chr3R 5449207 intron CG14669 + chr3R 5452449 intron CG14669 + chr3R_6_5445001 chr3R_5445001 RAL-805 1264 chr3R 5502293 5502307 chr3R 5502607 5502619 6 314 0.0 5.0 2.5 1.7 326 chr3R 5502293 exon CG31547 - chr3R 5502456 5` UTR CG31547 - chr3R 5502619 5` UTR CG31547 - chr3R_6_5500001 chr3R_5500001 RAL-805 1265 chr3R 5506839 5506870 chr3R 5506971 5507002 5 132 1.0 2.0 1.5 2.0 163 chr3R 5506839 intergenic not near genes chr3R 5506920 intergenic not near genes chr3R 5507002 intergenic not near genes chr3R_5_5505001 chr3R_5505001 RAL-805 1266 chr3R 5712089 5712112 chr3R 5712177 5712200 7 88 2.5 7.0 4.8 1.2 111 chr3R 5712089 3` UTR plx + chr3R 5712144 3` UTR plx + chr3R 5712200 3` UTR plx + chr3R_7_5710001 chr3R_5710001 RAL-805 1267 chr3R 5746020 5746043 chr3R 5746261 5746283 pogo 5 241 3.0 3.5 3.2 1.2 263 chr3R 5746020 3` UTR Madm + chr3R 5746152 3` UTR Madm + chr3R 5746283 3` UTR Madm + chr3R_5_5745001 chr3R_5745001 RAL-805 1268 chr3R 5772376 5772407 chr3R 5772534 5772565 5 158 2.5 3.0 2.8 1.3 189 chr3R 5772376 intron CG2082 - chr3R 5772470 intron CG2082 - chr3R 5772565 intron CG2082 - chr3R_5_5770001 chr3R_5770001 RAL-805 1269 chr3R 5809130 5809142 chr3R 5809370 5809383 pogo 4 241 2.0 3.5 2.8 1.1 253 chr3R 5809130 3` UTR CG11000 + chr3R 5809256 3` UTR CG11000 + chr3R 5809383 3` UTR CG11000 + chr3R_4_5805001 chr3R_5805001 RAL-805 1270 chr3R 5822391 5822408 chr3R 5823556 5823574 1360 7 1167 3.0 5.5 4.2 1.3 1183 chr3R 5822391 3` UTR CG2023 - chr3R 5822982 3` UTR CG2023 - chr3R 5823574 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 RAL-805 1271 chr3R 5846878 5846909 chr3R 5846954 5846984 4 76 1.5 2.5 2.0 1.3 106 chr3R 5846878 intergenic CG1213 +,CG14676 + chr3R 5846931 intergenic CG14676 +,CG1213 + chr3R 5846984 intergenic CG14676 +,CG1213 + chr3R_4_5845001 chr3R_5845001 RAL-805 1272 chr3R 5895952 5895983 chr3R 5896166 5896197 9 213 0.5 1.5 1.0 4.5 245 chr3R 5895952 intron CG34113 - chr3R 5896074 intron CG34113 - chr3R 5896197 intron CG34113 - chr3R_9_5895001 chr3R_5895001 RAL-805 1273 chr3R 5927576 5927591 chr3R 5927801 5927831 pogo 10 238 2.0 4.0 3.0 2.5 255 chr3R 5927576 intron CG34113 - chr3R 5927704 intron CG34113 - chr3R 5927831 intron CG34113 - chr3R_10_5925001 chr3R_5925001 RAL-805 1274 chr3R 5935366 5935391 chr3R 5935442 5935467 4 76 0.5 2.5 1.5 1.6 101 chr3R 5935366 intron CG34113 - chr3R 5935416 intron CG34113 - chr3R 5935467 intron CG34113 - chr3R_4_5935001 chr3R_5935001 RAL-805 1275 chr3R 6006331 6006351 chr3R 6006416 6006432 6 84 1.5 4.5 3.0 1.5 101 chr3R 6006331 intron Rm62 - chr3R 6006382 intron Rm62 - chr3R 6006432 intron Rm62 - chr3R_6_6005001 chr3R_6005001 RAL-805 1276 chr3R 6015961 6015995 chr3R 6024441 6024473 Tirant 9 8480 1.0 3.5 2.2 2.8 8512 chr3R 6015961 intergenic not near genes chr3R 6020217 intergenic not near genes chr3R 6024473 intergenic not near genes chr3R_9_6020001 chr3R_6020001 RAL-805 1277 chr3R 6043640 6043674 chr3R 6043862 6043896 9 220 0.5 2.5 1.5 3.6 256 chr3R 6043640 intergenic not near genes chr3R 6043768 intergenic not near genes chr3R 6043896 intergenic not near genes chr3R_9_6040001 chr3R_6040001 RAL-805 1278 chr3R 6048444 6048467 chr3R 6048526 6048550 7 82 3.0 2.0 2.5 2.0 106 chr3R 6048444 intergenic not near genes chr3R 6048497 intergenic not near genes chr3R 6048550 intergenic not near genes chr3R_7_6045001 chr3R_6045001 RAL-805 1279 chr3R 6121164 6121185 chr3R 6121382 6121403 BS 6 218 0.0 4.5 2.2 1.9 239 chr3R 6121164 intergenic not near genes chr3R 6121284 intergenic not near genes chr3R 6121403 intergenic not near genes chr3R_6_6120001 chr3R_6120001 RAL-805 1280 chr3R 6158515 6158542 chr3R 6167093 6167125 Tirant 9 8578 3.0 5.5 4.2 1.7 8610 chr3R 6158515 intergenic not near genes chr3R 6162820 intergenic not near genes chr3R 6167125 intergenic CG1077 + chr3R_9_6160001 chr3R_6160001 RAL-805 1281 chr3R 6175173 6175207 chr3R 6182445 6182478 HMS-Beagle2 8 7270 2.5 3.0 2.8 2.1 7305 chr3R 6175173 intergenic Osi1 + chr3R 6178826 intron CR45194 + chr3R 6182478 intergenic CR45194 + chr3R_8_6175001 chr3R_6175001 RAL-805 1282 chr3R 6191168 6191200 chr3R 6191248 6191260 11 76 5.0 4.5 4.8 1.9 92 chr3R 6191168 intron NPFR + chr3R 6191214 intron NPFR + chr3R 6191260 intron NPFR + chr3R_11_6190001 chr3R_6190001 RAL-805 1283 chr3R 6330781 6330814 chr3R 6330896 6330929 10 115 1.5 1.5 1.5 4.0 148 chr3R 6330781 exon Osi18 + chr3R 6330855 intron Osi18 + chr3R 6330929 intron Osi18 + chr3R_10_6330001 chr3R_6330001 RAL-805 1284 chr3R 6484063 6484086 chr3R 6484155 6484179 7 93 2.5 2.5 2.5 2.0 116 chr3R 6484063 intron CG15186 + chr3R 6484121 intron CG15186 + chr3R 6484179 intron CG15186 + chr3R_7_6480001 chr3R_6480001 RAL-805 1285 chr3R 6496663 6496682 chr3R 6496750 6496770 6 88 1.0 3.0 2.0 2.0 107 chr3R 6496663 intergenic not near genes chr3R 6496716 intergenic not near genes chr3R 6496770 intergenic not near genes chr3R_6_6495001 chr3R_6495001 RAL-805 1286 chr3R 6519111 6519130 chr3R 6519219 6519238 8 108 3.5 1.0 2.2 2.5 127 chr3R 6519111 intergenic not near genes chr3R 6519174 intergenic not near genes chr3R 6519238 intergenic not near genes chr3R_8_6515001 chr3R_6515001 RAL-805 1287 chr3R 6610044 6610072 chr3R 6610195 6610224 12 152 4.5 3.0 3.8 2.5 180 chr3R 6610044 intergenic not near genes chr3R 6610134 intergenic not near genes chr3R 6610224 intergenic not near genes chr3R_12_6610001 chr3R_6610001 RAL-805 1288 chr3R 6655761 6655793 chr3R 6656033 6656065 13 272 1.5 1.0 1.2 5.9 304 chr3R 6655761 exon Taf1 + chr3R 6655913 3` UTR Taf1 + chr3R 6656065 intergenic Taf1 +,CG1307 - chr3R_13_6655001 chr3R_6655001 RAL-805 1289 chr3R 6658567 6658579 chr3R 6658716 6658723 4 146 5.5 1.5 3.5 0.9 156 chr3R 6658567 intron twr + chr3R 6658645 intron twr + chr3R 6658723 intron twr + chr3R_4_6655001 chr3R_6655001 RAL-805 1290 chr3R 6658581 6658596 chr3R 6658714 6658745 5 145 3.5 1.5 2.5 1.4 164 chr3R 6658581 intron twr + chr3R 6658663 intron twr + chr3R 6658745 intron twr + chr3R_5_6655001 chr3R_6655001 RAL-805 1291 chr3R 6663610 6663631 chr3R 6663690 6663711 7 80 3.5 4.5 4.0 1.4 101 chr3R 6663610 intron lab - chr3R 6663660 intron lab - chr3R 6663711 intron lab - chr3R_7_6660001 chr3R_6660001 RAL-805 1292 chr3R 6670573 6670598 chr3R 6670682 6670707 5 109 2.0 3.0 2.5 1.4 134 chr3R 6670573 intron lab - chr3R 6670640 intron lab - chr3R 6670707 intron lab - chr3R_5_6670001 chr3R_6670001 RAL-805 1293 chr3R 6705685 6705708 chr3R 6705908 6705932 5 224 1.0 1.5 1.2 2.3 247 chr3R 6705685 intergenic not near genes chr3R 6705808 intergenic not near genes chr3R 6705932 intergenic not near genes chr3R_5_6705001 chr3R_6705001 RAL-805 1294 chr3R 6737497 6737531 chr3R 6739284 6739318 Doc 7 1786 3.0 1.0 2.0 2.3 1821 chr3R 6737497 intron pb - chr3R 6738408 intron pb - chr3R 6739318 intron pb - chr3R_7_6735001 chr3R_6735001 RAL-805 1295 chr3R 6819629 6819662 chr3R 6819713 6819746 6 84 1.0 1.5 1.2 2.7 117 chr3R 6819629 intergenic not near genes chr3R 6819688 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819746 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R_6_6815001 chr3R_6815001 RAL-805 1296 chr3R 6914747 6914772 chr3R 6914839 6914870 5 98 2.0 2.5 2.2 1.6 123 chr3R 6914747 intron Antp - chr3R 6914808 intron Antp - chr3R 6914870 intron Antp - chr3R_5_6910001 chr3R_6910001 RAL-805 1297 chr3R 6958925 6958953 chr3R 6959135 6959164 15 211 3.5 2.5 3.0 3.8 239 chr3R 6958925 intron Antp - chr3R 6959044 intron Antp - chr3R 6959164 intron Antp - chr3R_15_6955001 chr3R_6955001 RAL-805 1298 chr3R 7036761 7036775 chr3R 7036840 7036854 4 79 0.5 2.5 1.5 1.6 93 chr3R 7036761 intergenic not near genes chr3R 7036808 intergenic not near genes chr3R 7036854 intergenic not near genes chr3R_4_7035001 chr3R_7035001 RAL-805 1299 chr3R 7092784 7092815 chr3R 7093347 7093379 17 564 1.0 2.0 1.5 6.8 595 chr3R 7092784 3` UTR CR43685 - chr3R 7093082 intron CR43685 - chr3R 7093379 3` UTR CR43685 - chr3R_17_7090001 chr3R_7090001 RAL-805 1300 chr3R 7103283 7103317 chr3R 7103359 7103382 15 75 4.5 0.5 2.5 4.3 99 chr3R 7103283 intron Alh - chr3R 7103332 intron Alh - chr3R 7103382 intron Alh - chr3R_15_7100001 chr3R_7100001 RAL-805 1301 chr3R 7210606 7210618 chr3R 7210692 7210704 4 86 0.0 4.5 2.2 1.2 98 chr3R 7210606 intergenic not near genes chr3R 7210655 intergenic not near genes chr3R 7210704 intergenic not near genes chr3R_4_7210001 chr3R_7210001 RAL-805 1302 chr3R 7404948 7404968 chr3R 7405024 7405044 5 76 0.0 0.5 0.2 4.2 96 chr3R 7404948 intergenic not near genes chr3R 7404996 intergenic not near genes chr3R 7405044 intergenic not near genes chr3R_5_7400001 chr3R_7400001 RAL-805 1303 chr3R 7574643 7574652 chr3R 7574725 7574734 4 81 0.5 2.0 1.2 1.8 91 chr3R 7574643 intron CG34127 - chr3R 7574688 intron CG34127 - chr3R 7574734 intron CG34127 - chr3R_4_7570001 chr3R_7570001 RAL-805 1304 chr3R 7677919 7677934 chr3R 7678032 7678047 6 113 1.0 3.5 2.2 1.9 128 chr3R 7677919 intron Nlg1 + chr3R 7677983 intron Nlg1 + chr3R 7678047 intron Nlg1 + chr3R_6_7675001 chr3R_7675001 RAL-805 1305 chr3R 7694578 7694609 chr3R 7713639 7713670 invader3 6 19061 0.5 2.0 1.2 2.7 19092 chr3R 7694578 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713670 intergenic not near genes chr3R_6_7700001 chr3R_7700001 RAL-805 1306 chr3R 7729464 7729495 chr3R 7737402 7737412 Stalker2 7 7934 3.0 2.0 2.5 2.0 7948 chr3R 7729464 intergenic not near genes chr3R 7733438 intergenic not near genes chr3R 7737412 intergenic not near genes chr3R_7_7730001 chr3R_7730001 RAL-805 1307 chr3R 7838031 7838049 chr3R 7838248 7838273 8 223 4.0 1.5 2.8 2.1 242 chr3R 7838031 intron CG34384 + chr3R 7838152 intron CG34384 + chr3R 7838273 intron CG34384 + chr3R_8_7835001 chr3R_7835001 RAL-805 1308 chr3R 7973316 7973345 chr3R 7974377 7974407 1360 5 1062 3.5 1.5 2.5 1.4 1091 chr3R 7973316 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974407 intergenic CD98hc - chr3R_5_7970001 chr3R_7970001 RAL-805 1309 chr3R 8015055 8015087 chr3R 8015612 8015644 24 556 24.0 15.0 19.5 1.2 589 chr3R 8015055 exon Pbp95 + chr3R 8015350 exon Pbp95 + chr3R 8015644 exon Pbp95 + chr3R_24_8015001 chr3R_8015001 RAL-805 1310 chr3R 8040655 8040673 chr3R 8040738 8040757 5 84 2.5 3.0 2.8 1.3 102 chr3R 8040655 intergenic not near genes chr3R 8040706 intergenic not near genes chr3R 8040757 intergenic CG43060 + chr3R_5_8040001 chr3R_8040001 RAL-805 1311 chr3R 8042175 8042182 chr3R 8042338 8042372 4 181 16.5 15.5 16.0 0.2 197 chr3R 8042175 intron CG43060 + chr3R 8042274 intron CG43060 + chr3R 8042372 intron CG43060 + chr3R_4_8040001 chr3R_8040001 RAL-805 1312 chr3R 8107393 8107420 chr3R 8107527 8107554 12 134 2.5 3.0 2.8 3.2 161 chr3R 8107393 intron puc + chr3R 8107474 intron puc + chr3R 8107554 intron puc + chr3R_12_8105001 chr3R_8105001 RAL-805 1313 chr3R 8156357 8156387 chr3R 8156438 8156467 12 80 2.0 3.0 2.5 3.4 110 chr3R 8156357 intron grn - chr3R 8156412 intron grn - chr3R 8156467 intron grn - chr3R_12_8155001 chr3R_8155001 RAL-805 1314 chr3R 8207554 8207585 chr3R 8208398 8208430 F-element 6 844 4.0 3.5 3.8 1.2 876 chr3R 8207554 intergenic not near genes chr3R 8207992 intergenic not near genes chr3R 8208430 intergenic not near genes chr3R_6_8205001 chr3R_8205001 RAL-805 1315 chr3R 8273733 8273769 chr3R 8273820 8273856 11 87 1.0 1.5 1.2 5.0 123 chr3R 8273733 intergenic not near genes chr3R 8273794 intergenic not near genes chr3R 8273856 intergenic not near genes chr3R_11_8270001 chr3R_8270001 RAL-805 1316 chr3R 8339246 8339247 chr3R 21907534 21907536 11 13568288 13.0 16.0 14.5 0.7 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_11_15120001 chr3R_15120001 RAL-805 1317 chr3R 8403006 8403038 chr3R 8412172 8412204 roo 11 9164 2.0 2.0 2.0 3.7 9198 chr3R 8403006 intron CG45263 - chr3R 8407605 intron CG45263 - chr3R 8412204 intron CG45263 - chr3R_11_8405001 chr3R_8405001 RAL-805 1318 chr3R 8426512 8426532 chr3R 8426933 8426956 7 422 3.0 3.0 3.0 1.8 444 chr3R 8426512 intron CG45263 - chr3R 8426734 intron CG45263 - chr3R 8426956 intron CG45263 - chr3R_7_8425001 chr3R_8425001 RAL-805 1319 chr3R 8469569 8469583 chr3R 8469644 8469663 4 77 4.0 5.5 4.8 0.7 94 chr3R 8469569 intron CG45263 - chr3R 8469616 intron CG45263 - chr3R 8469663 intron CG45263 - chr3R_4_8465001 chr3R_8465001 RAL-805 1320 chr3R 8516919 8516943 chr3R 8517293 8517311 8 373 2.5 5.5 4.0 1.6 392 chr3R 8516919 intergenic not near genes chr3R 8517115 intergenic not near genes chr3R 8517311 intergenic not near genes chr3R_8_8515001 chr3R_8515001 RAL-805 1321 chr3R 8520920 8520947 chr3R 8525898 8525929 6 4978 24.0 15.5 19.8 0.3 5009 chr3R 8520920 exon CG11737 + chr3R 8523424 exon CG31454 + chr3R 8525929 exon CG31259 + chr3R_6_8520001 chr3R_8520001 RAL-805 1322 chr3R 8545160 8545183 chr3R 8545245 8545261 8 82 2.5 1.5 2.0 2.7 101 chr3R 8545160 intergenic not near genes chr3R 8545210 intergenic CR45575 + chr3R 8545261 intergenic CR45575 + chr3R_8_8545001 chr3R_8545001 RAL-805 1323 chr3R 8548670 8548691 chr3R 8552419 8552441 5 3749 27.0 29.5 28.2 0.2 3771 chr3R 8548670 intergenic not near genes chr3R 8550556 intergenic not near genes chr3R 8552441 intergenic Or85d + chr3R_5_8550001 chr3R_8550001 RAL-805 1324 chr3R 8556877 8556903 chr3R 8556963 8556992 5 88 0.5 2.0 1.2 2.3 115 chr3R 8556877 intergenic not near genes chr3R 8556934 intergenic not near genes chr3R 8556992 intergenic not near genes chr3R_5_8555001 chr3R_8555001 RAL-805 1325 chr3R 8570480 8570498 chr3R 8575114 8575134 HMS-Beagle 7 4634 2.5 2.0 2.2 2.2 4654 chr3R 8570480 intergenic not near genes chr3R 8572807 intergenic not near genes chr3R 8575134 intergenic not near genes chr3R_7_8570001 chr3R_8570001 RAL-805 1326 chr3R 8636932 8636962 chr3R 8637235 8637263 6 300 2.0 4.0 3.0 1.5 331 chr3R 8636932 intergenic not near genes chr3R 8637098 intergenic not near genes chr3R 8637263 intergenic not near genes chr3R_6_8635001 chr3R_8635001 RAL-805 1327 chr3R 8685303 8685315 chr3R 8685403 8685415 7 100 2.5 4.5 3.5 1.6 112 chr3R 8685303 intron CR44937 - chr3R 8685359 intron CR44937 - chr3R 8685415 intron CR44937 - chr3R_7_8685001 chr3R_8685001 RAL-805 1328 chr3R 8707356 8707385 chr3R 8709794 8709826 jockey 10 2441 2.5 5.0 3.8 2.1 2470 chr3R 8707356 intergenic not near genes chr3R 8708591 intergenic not near genes chr3R 8709826 intergenic not near genes chr3R_10_8705001 chr3R_8705001 RAL-805 1329 chr3R 8856368 8856399 chr3R 8856442 8856476 14 76 2.0 3.0 2.5 4.0 108 chr3R 8856368 intron pyd - chr3R 8856422 intron pyd - chr3R 8856476 intron pyd - chr3R_14_8855001 chr3R_8855001 RAL-805 1330 chr3R 8917888 8917912 chr3R 8917968 8917992 9 80 4.0 2.5 3.2 2.1 104 chr3R 8917888 intron pyd - chr3R 8917940 intron pyd - chr3R 8917992 intron pyd - chr3R_9_8915001 chr3R_8915001 RAL-805 1331 chr3R 9066192 9066222 chr3R 9066268 9066298 6 76 3.5 2.5 3.0 1.5 106 chr3R 9066192 exon Ada + chr3R 9066245 exon Ada + chr3R 9066298 3` UTR Ada + chr3R_6_9065001 chr3R_9065001 RAL-805 1332 chr3R 9100853 9100885 chr3R 9101162 9101194 12 308 2.5 4.0 3.2 2.9 341 chr3R 9100853 intron pum - chr3R 9101024 intron pum - chr3R 9101194 intron pum - chr3R_12_9100001 chr3R_9100001 RAL-805 1333 chr3R 9108866 9108877 chr3R 9108942 9108953 7 76 4.0 0.5 2.2 2.2 87 chr3R 9108866 intron pum - chr3R 9108910 intron pum - chr3R 9108953 intron pum - chr3R_7_9105001 chr3R_9105001 RAL-805 1334 chr3R 9127943 9127961 chr3R 9128087 9128105 9 143 3.0 4.0 3.5 2.0 162 chr3R 9127943 intron pum - chr3R 9128024 intron pum - chr3R 9128105 intron pum - chr3R_9_9125001 chr3R_9125001 RAL-805 1335 chr3R 9204359 9204381 chr3R 9204999 9205020 12 639 1.5 2.0 1.8 4.3 661 chr3R 9204359 intron pum - chr3R 9204690 intron pum - chr3R 9205020 intron pum - chr3R_12_9200001 chr3R_9200001 RAL-805 1336 chr3R 9289163 9289177 chr3R 9289428 9289442 5 265 3.0 4.0 3.5 1.1 279 chr3R 9289163 intergenic not near genes chr3R 9289302 intergenic not near genes chr3R 9289442 intergenic not near genes chr3R_5_9285001 chr3R_9285001 RAL-805 1337 chr3R 9289178 9289187 chr3R 9289427 9289452 6 262 2.0 4.0 3.0 1.5 274 chr3R 9289178 intergenic not near genes chr3R 9289315 intergenic not near genes chr3R 9289452 intergenic not near genes chr3R_6_9285001 chr3R_9285001 RAL-805 1338 chr3R 9319579 9319605 chr3R 9320014 9320035 jockey 7 434 3.5 3.5 3.5 1.6 456 chr3R 9319579 intron CG8861 - chr3R 9319807 intron CG8861 - chr3R 9320035 intron CG8861 - chr3R_7_9315001 chr3R_9315001 RAL-805 1339 chr3R 9361819 9361846 chr3R 9362059 9362087 pogo 4 240 2.0 1.5 1.8 1.4 268 chr3R 9361819 3` UTR CG45050 + chr3R 9361953 3` UTR CG45050 + chr3R 9362087 3` UTR CG45050 + chr3R_4_9360001 chr3R_9360001 RAL-805 1340 chr3R 9375367 9375396 chr3R 9375789 9375818 9 422 4.5 5.0 4.8 1.6 451 chr3R 9375367 intron FER - chr3R 9375592 intron FER - chr3R 9375818 intron FER - chr3R_9_9375001 chr3R_9375001 RAL-805 1341 chr3R 9480417 9480439 chr3R 9480512 9480527 4 95 3.5 3.5 3.5 0.9 110 chr3R 9480417 intron CG16779 - chr3R 9480472 intron CG16779 - chr3R 9480527 intron CG16779 - chr3R_4_9480001 chr3R_9480001 RAL-805 1342 chr3R 9611878 9611904 chr3R 9611960 9611986 4 82 1.5 0.0 0.8 2.2 108 chr3R 9611878 intron CG8312 + chr3R 9611932 intron CG8312 + chr3R 9611986 intron CG8312 + chr3R_4_9610001 chr3R_9610001 RAL-805 1343 chr3R 9699974 9699977 chr3R 9700063 9700066 4 89 4.5 1.5 3.0 1.0 92 chr3R 9699974 intron Unc-115a - chr3R 9700020 intron Unc-115a - chr3R 9700066 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 RAL-805 1344 chr3R 9699979 9700001 chr3R 9700061 9700088 1360 6 84 2.5 1.5 2.0 2.0 109 chr3R 9699979 intron Unc-115a - chr3R 9700034 intron Unc-115a - chr3R 9700088 intron Unc-115a - chr3R_6_9700001 chr3R_9700001 RAL-805 1345 chr3R 9859997 9860001 chr3R 9860111 9860115 4 114 5.0 2.5 3.8 0.8 118 chr3R 9859997 intron Teh1 - chr3R 9860056 intron Teh1 - chr3R 9860115 intron Teh1 - chr3R_4_9860001 chr3R_9860001 RAL-805 1346 chr3R 9898801 9898819 chr3R 9898893 9898911 7 92 4.0 2.5 3.2 1.7 110 chr3R 9898801 intron Glut4EF + chr3R 9898856 intron Glut4EF + chr3R 9898911 intron Glut4EF + chr3R_7_9895001 chr3R_9895001 RAL-805 1347 chr3R 10037659 10037683 chr3R 10037741 10037763 4 82 1.5 4.0 2.8 1.1 104 chr3R 10037659 intron Mical - chr3R 10037711 intron Mical - chr3R 10037763 intron Mical - chr3R_4_10035001 chr3R_10035001 RAL-805 1348 chr3R 10062246 10062271 chr3R 10062369 10062394 5 123 1.0 0.5 0.8 2.8 148 chr3R 10062246 intergenic CR45205 -,CG33630 + chr3R 10062320 intergenic CG33630 +,CR45205 - chr3R 10062394 intergenic CG33630 +,CR45205 - chr3R_5_10060001 chr3R_10060001 RAL-805 1349 chr3R 10073769 10073800 chr3R 10073878 10073909 7 109 2.0 4.0 3.0 1.8 140 chr3R 10073769 intergenic nerfin-2 +,CG5361 - chr3R 10073839 3` UTR CG5361 - chr3R 10073909 exon CG5361 - chr3R_7_10070001 chr3R_10070001 RAL-805 1350 chr3R 10174132 10174152 chr3R 10174214 10174234 7 82 1.5 3.5 2.5 2.0 102 chr3R 10174132 intron CG12814 - chr3R 10174183 intron CG12814 - chr3R 10174234 intron CG12814 - chr3R_7_10170001 chr3R_10170001 RAL-805 1351 chr3R 10221593 10221618 chr3R 10221732 10221757 6 139 2.0 1.0 1.5 2.4 164 chr3R 10221593 3` UTR Syn + chr3R 10221675 3` UTR Syn + chr3R 10221757 3` UTR Syn + chr3R_6_10220001 chr3R_10220001 RAL-805 1352 chr3R 10231782 10231814 chr3R 10237359 10237391 mdg3 4 5577 0.5 1.5 1.0 2.0 5609 chr3R 10231782 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237391 intron CG42795 + chr3R_4_10230001 chr3R_10230001 RAL-805 1353 chr3R 10275559 10275579 chr3R 10275635 10275656 4 77 2.5 2.0 2.2 1.2 97 chr3R 10275559 intron CG43143 + chr3R 10275608 intron CG43143 + chr3R 10275656 intron CG43143 + chr3R_4_10275001 chr3R_10275001 RAL-805 1354 chr3R 10282060 10282087 chr3R 10282171 10282197 9 110 2.5 2.0 2.2 2.8 137 chr3R 10282060 intron CG43143 + chr3R 10282128 intron CG43143 + chr3R 10282197 intron CG43143 + chr3R_9_10280001 chr3R_10280001 RAL-805 1355 chr3R 10417473 10417499 chr3R 10417808 10417826 8 334 2.5 1.0 1.8 2.9 353 chr3R 10417473 intergenic not near genes chr3R 10417650 intergenic not near genes chr3R 10417826 intergenic not near genes chr3R_8_10415001 chr3R_10415001 RAL-805 1356 chr3R 10531868 10531898 chr3R 10531949 10531978 11 81 4.5 1.5 3.0 2.8 110 chr3R 10531868 intron hth - chr3R 10531923 intron hth - chr3R 10531978 intron hth - chr3R_11_10530001 chr3R_10530001 RAL-805 1357 chr3R 10561802 10561830 chr3R 10561891 10561920 6 90 1.0 3.0 2.0 2.0 118 chr3R 10561802 intron hth - chr3R 10561861 intron hth - chr3R 10561920 exon hth - chr3R_6_10560001 chr3R_10560001 RAL-805 1358 chr3R 10681989 10682003 chr3R 10682094 10682108 7 105 2.5 0.0 1.2 3.2 119 chr3R 10681989 intergenic not near genes chr3R 10682048 intergenic not near genes chr3R 10682108 intergenic not near genes chr3R_7_10680001 chr3R_10680001 RAL-805 1359 chr3R 10730995 10731020 chr3R 10731161 10731186 12 166 2.5 3.0 2.8 3.2 191 chr3R 10730995 intergenic not near genes chr3R 10731090 intergenic not near genes chr3R 10731186 intergenic not near genes chr3R_12_10730001 chr3R_10730001 RAL-805 1360 chr3R 10804182 10804205 chr3R 10811714 10811736 17.6 6 7532 1.5 4.0 2.8 1.6 7554 chr3R 10804182 intergenic CG14692 - chr3R 10807959 intergenic not near genes chr3R 10811736 3` UTR CG14693 - chr3R_6_10805001 chr3R_10805001 RAL-805 1361 chr3R 10914771 10914804 chr3R 10914848 10914881 9 77 1.5 3.5 2.5 2.6 110 chr3R 10914771 intergenic not near genes chr3R 10914826 intergenic not near genes chr3R 10914881 intergenic not near genes chr3R_9_10910001 chr3R_10910001 RAL-805 1362 chr3R 10919687 10919718 chr3R 10919765 10919796 6 78 1.5 2.5 2.0 2.0 109 chr3R 10919687 intergenic not near genes chr3R 10919742 intergenic not near genes chr3R 10919796 intergenic not near genes chr3R_6_10915001 chr3R_10915001 RAL-805 1363 chr3R 10920043 10920078 chr3R 10920121 10920156 10 77 1.0 4.0 2.5 2.9 113 chr3R 10920043 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920156 intergenic not near genes chr3R_10_10920001 chr3R_10920001 RAL-805 1364 chr3R 10954418 10954425 chr3R 10954587 10954590 4 171 3.0 2.0 2.5 1.1 172 chr3R 10954418 intergenic not near genes chr3R 10954504 intergenic not near genes chr3R 10954590 intergenic not near genes chr3R_4_10950001 chr3R_10950001 RAL-805 1365 chr3R 11102682 11102715 chr3R 11102771 11102803 7 88 2.5 3.0 2.8 1.8 121 chr3R 11102682 intergenic not near genes chr3R 11102742 intergenic not near genes chr3R 11102803 intergenic not near genes chr3R_7_11100001 chr3R_11100001 RAL-805 1366 chr3R 11104273 11104277 chr3R 11104352 11104356 4 79 3.0 0.0 1.5 1.6 83 chr3R 11104273 intergenic not near genes chr3R 11104314 intergenic not near genes chr3R 11104356 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-805 1367 chr3R 11149868 11149900 chr3R 11149965 11149997 17 96 3.0 2.0 2.5 4.9 129 chr3R 11149868 intergenic not near genes chr3R 11149932 intergenic not near genes chr3R 11149997 intergenic not near genes chr3R_17_11145001 chr3R_11145001 RAL-805 1368 chr3R 11155046 11155069 chr3R 11155124 11155147 10 78 0.5 2.5 1.5 4.0 101 chr3R 11155046 intron Ugt86Dc + chr3R 11155096 intron Ugt86Dc + chr3R 11155147 intron Ugt86Dc + chr3R_10_11155001 chr3R_11155001 RAL-805 1369 chr3R 11294465 11294492 chr3R 11294776 11294803 13 311 3.0 1.5 2.2 4.1 338 chr3R 11294465 intron CR31386 - chr3R 11294634 intron CR31386 - chr3R 11294803 intron CR31386 - chr3R_13_11290001 chr3R_11290001 RAL-805 1370 chr3R 11307205 11307222 chr3R 11307281 11307285 6 79 3.5 3.5 3.5 1.3 80 chr3R 11307205 intergenic not near genes chr3R 11307245 intergenic not near genes chr3R 11307285 intergenic not near genes chr3R_6_11305001 chr3R_11305001 RAL-805 1371 chr3R 11379239 11379266 chr3R 11388394 11388421 roo 7 9155 3.5 4.0 3.8 1.5 9182 chr3R 11379239 intron pros + chr3R 11383830 intron pros + chr3R 11388421 intron pros + chr3R_7_11380001 chr3R_11380001 RAL-805 1372 chr3R 11404951 11404972 chr3R 11405027 11405052 8 79 2.0 3.5 2.8 2.1 101 chr3R 11404951 3` UTR pros + chr3R 11405002 3` UTR pros + chr3R 11405052 3` UTR pros + chr3R_8_11405001 chr3R_11405001 RAL-805 1373 chr3R 11408754 11408782 chr3R 11408848 11408873 10 93 5.0 2.0 3.5 2.2 119 chr3R 11408754 3` UTR mRpL40 + chr3R 11408814 3` UTR mgr - chr3R 11408873 3` UTR mgr - chr3R_10_11405001 chr3R_11405001 RAL-805 1374 chr3R 11452082 11452105 chr3R 11452166 11452192 13 86 4.5 1.0 2.8 3.4 110 chr3R 11452082 intron CG17230 + chr3R 11452137 intron CG17230 + chr3R 11452192 intron CG17230 + chr3R_13_11450001 chr3R_11450001 RAL-805 1375 chr3R 11455583 11455597 chr3R 11455709 11455723 4 126 9.0 3.5 6.2 0.6 140 chr3R 11455583 intron,intron CG17230 +,PGRP-LB - chr3R 11455653 intron,intron CG17230 +,PGRP-LB - chr3R 11455723 intron,intron CG17230 +,PGRP-LB - chr3R_4_11455001 chr3R_11455001 RAL-805 1376 chr3R 11513846 11513874 chr3R 11513928 11513957 4 82 2.5 1.0 1.8 1.4 111 chr3R 11513846 intergenic not near genes chr3R 11513902 intergenic not near genes chr3R 11513957 intergenic not near genes chr3R_4_11510001 chr3R_11510001 RAL-805 1377 chr3R 11518811 11518836 chr3R 11518902 11518927 10 91 3.5 2.0 2.8 2.6 116 chr3R 11518811 intergenic not near genes chr3R 11518869 intergenic not near genes chr3R 11518927 intergenic not near genes chr3R_10_11515001 chr3R_11515001 RAL-805 1378 chr3R 11570025 11570053 chr3R 11570375 11570402 7 350 1.5 0.5 1.0 3.5 377 chr3R 11570025 intron Mrp4 + chr3R 11570214 intron Mrp4 + chr3R 11570402 intron Mrp4 + chr3R_7_11570001 chr3R_11570001 RAL-805 1379 chr3R 11639226 11639245 chr3R 11639371 11639390 8 145 3.5 1.0 2.2 2.5 164 chr3R 11639226 intron Csk - chr3R 11639308 intron Csk - chr3R 11639390 intron Csk - chr3R_8_11635001 chr3R_11635001 RAL-805 1380 chr3R 11695740 11695766 chr3R 11695820 11695847 12 81 3.5 4.0 3.8 2.5 107 chr3R 11695740 intergenic not near genes chr3R 11695794 intergenic not near genes chr3R 11695847 intergenic not near genes chr3R_12_11695001 chr3R_11695001 RAL-805 1381 chr3R 11734166 11734190 chr3R 11734279 11734307 11 117 2.5 1.5 2.0 3.7 141 chr3R 11734166 intergenic not near genes chr3R 11734236 intergenic not near genes chr3R 11734307 intergenic not near genes chr3R_11_11730001 chr3R_11730001 RAL-805 1382 chr3R 11763931 11763945 chr3R 11764008 11764025 4 77 1.5 8.0 4.8 0.7 94 chr3R 11763931 5` UTR Lk6 - chr3R 11763978 5` UTR Lk6 - chr3R 11764025 5` UTR Lk6 - chr3R_4_11760001 chr3R_11760001 RAL-805 1383 chr3R 11841061 11841089 chr3R 11846252 11846280 BS 4 5191 3.0 3.5 3.2 1.0 5219 chr3R 11841061 intron CG6959 - chr3R 11843670 intron CG6959 - chr3R 11846280 intron CG6959 - chr3R_4_11840001 chr3R_11840001 RAL-805 1384 chr3R 11909379 11909386 chr3R 11909438 11909439 6 66 3.5 3.5 3.5 1.3 60 chr3R 11909379 intron Cad87A - chr3R 11909409 intron Cad87A - chr3R 11909439 intron Cad87A - chr3R_6_11905001 chr3R_11905001 RAL-805 1385 chr3R 12088092 12088324 chr3R 12088174 12088396 4 79 3.5 0.0 1.8 1.4 304 chr3R 12088092 intron CG14741 - chr3R 12088244 intron CG14741 - chr3R 12088396 intron CG14741 - chr3R_4_12085001 chr3R_12085001 RAL-805 1386 chr3R 12328167 12328181 chr3R 12328278 12328292 5 111 5.5 0.5 3.0 1.2 125 chr3R 12328167 intergenic CR45584 + chr3R 12328230 intergenic CR45584 + chr3R 12328292 intergenic CR45584 + chr3R_5_12325001 chr3R_12325001 RAL-805 1387 chr3R 12720726 12720757 chr3R 12720896 12720927 15 168 6.5 3.0 4.8 2.6 201 chr3R 12720726 intron Men - chr3R 12720826 intron Men - chr3R 12720927 intron Men - chr3R_15_12720001 chr3R_12720001 RAL-805 1388 chr3R 12725947 12725966 chr3R 12726052 12726071 4 104 3.0 0.5 1.8 1.4 124 chr3R 12725947 intergenic not near genes chr3R 12726009 intergenic not near genes chr3R 12726071 intergenic not near genes chr3R_4_12725001 chr3R_12725001 RAL-805 1389 chr3R 12725967 12725971 chr3R 12726048 12726064 5 89 3.0 0.0 1.5 2.0 97 chr3R 12725967 intergenic not near genes chr3R 12726016 intergenic not near genes chr3R 12726064 intergenic not near genes chr3R_5_12725001 chr3R_12725001 RAL-805 1390 chr3R 12735807 12735819 chr3R 12735893 12735917 4 95 5.5 2.5 4.0 0.8 110 chr3R 12735807 intergenic not near genes chr3R 12735862 intergenic not near genes chr3R 12735917 intergenic not near genes chr3R_4_12735001 chr3R_12735001 RAL-805 1391 chr3R 12766407 12766439 chr3R 12766491 12766523 6 83 0.5 3.0 1.8 2.1 116 chr3R 12766407 intron beat-Vc - chr3R 12766465 intron beat-Vc - chr3R 12766523 intron beat-Vc - chr3R_6_12765001 chr3R_12765001 RAL-805 1392 chr3R 12866488 12866514 chr3R 12866639 12866665 12 151 3.0 3.5 3.2 2.9 177 chr3R 12866488 intergenic not near genes chr3R 12866576 intergenic not near genes chr3R 12866665 intergenic not near genes chr3R_12_12865001 chr3R_12865001 RAL-805 1393 chr3R 12885104 12885129 chr3R 12885211 12885236 6 107 1.5 0.5 1.0 3.0 132 chr3R 12885104 intergenic not near genes chr3R 12885170 intergenic not near genes chr3R 12885236 intergenic not near genes chr3R_6_12885001 chr3R_12885001 RAL-805 1394 chr3R 12920157 12920176 chr3R 12925357 12925379 copia 4 5202 2.0 5.0 3.5 0.9 5222 chr3R 12920157 intron beat-Vb + chr3R 12922768 intron beat-Vb + chr3R 12925379 intron beat-Vb + chr3R_4_12920001 chr3R_12920001 RAL-805 1395 chr3R 12947289 12947320 chr3R 12947451 12947467 6 159 2.5 1.0 1.8 2.1 178 chr3R 12947289 intergenic not near genes chr3R 12947378 intergenic not near genes chr3R 12947467 intergenic not near genes chr3R_6_12945001 chr3R_12945001 RAL-805 1396 chr3R 12972556 12972583 chr3R 12972695 12972722 10 139 2.0 4.0 3.0 2.5 166 chr3R 12972556 intron CG7381 - chr3R 12972639 intron CG7381 - chr3R 12972722 intron CG7381 - chr3R_10_12970001 chr3R_12970001 RAL-805 1397 chr3R 13059963 13059975 chr3R 13060157 13060169 4 194 2.5 1.5 2.0 1.3 206 chr3R 13059963 intron sim + chr3R 13060066 intron sim + chr3R 13060169 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-805 1398 chr3R 13067109 13067132 chr3R 13067180 13067208 7 75 0.0 0.0 0.0 7.0 99 chr3R 13067109 intron sim + chr3R 13067158 intron sim + chr3R 13067208 intron sim + chr3R_7_13065001 chr3R_13065001 RAL-805 1399 chr3R 13120773 13120796 chr3R 13120850 13120872 16 76 2.0 6.0 4.0 3.2 99 chr3R 13120773 intron timeout + chr3R 13120822 intron timeout + chr3R 13120872 intron timeout + chr3R_16_13120001 chr3R_13120001 RAL-805 1400 chr3R 13135828 13135859 chr3R 13138003 13138034 pogo 8 2175 1.0 4.0 2.5 2.3 2206 chr3R 13135828 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136931 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138034 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13135001 chr3R_13135001 RAL-805 1401 chr3R 13143041 13143064 chr3R 13148616 13148625 mdg3 9 5570 2.5 5.0 3.8 1.9 5584 chr3R 13143041 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145833 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148625 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 RAL-805 1402 chr3R 13174541 13174568 chr3R 13174647 13174674 5 106 2.0 4.5 3.2 1.2 133 chr3R 13174541 intergenic not near genes chr3R 13174608 intergenic not near genes chr3R 13174674 intergenic not near genes chr3R_5_13170001 chr3R_13170001 RAL-805 1403 chr3R 13195961 13195976 chr3R 13196046 13196071 7 91 2.5 2.5 2.5 2.0 110 chr3R 13195961 intergenic not near genes chr3R 13196016 intergenic not near genes chr3R 13196071 intergenic not near genes chr3R_7_13195001 chr3R_13195001 RAL-805 1404 chr3R 13197175 13197205 chr3R 13198455 13198484 11 1280 13.0 6.0 9.5 1.0 1309 chr3R 13197175 intergenic not near genes chr3R 13197830 intergenic not near genes chr3R 13198484 intergenic not near genes chr3R_11_13195001 chr3R_13195001 RAL-805 1405 chr3R 13197027 13197059 chr3R 13198497 13198529 7 1471 16.5 10.0 13.2 0.5 1502 chr3R 13197027 intergenic not near genes chr3R 13197778 intergenic not near genes chr3R 13198529 intergenic not near genes chr3R_7_13195001 chr3R_13195001 RAL-805 1406 chr3R 13272057 13272078 chr3R 13272142 13272160 5 82 1.5 1.0 1.2 2.3 103 chr3R 13272057 intergenic CG8449 - chr3R 13272108 intergenic CG8449 - chr3R 13272160 intergenic CG8449 - chr3R_5_13270001 chr3R_13270001 RAL-805 1407 chr3R 13314094 13314123 chr3R 13318882 13318911 Doc 6 4788 4.0 2.0 3.0 1.5 4817 chr3R 13314094 intergenic not near genes chr3R 13316502 intergenic not near genes chr3R 13318911 intergenic CG45080 - chr3R_6_13315001 chr3R_13315001 RAL-805 1408 chr3R 13391267 13391304 chr3R 13391354 13391391 13 86 3.0 2.5 2.8 3.4 124 chr3R 13391267 intron CCHa2 - chr3R 13391329 intron CCHa2 - chr3R 13391391 intron CCHa2 - chr3R_13_13390001 chr3R_13390001 RAL-805 1409 chr3R 13420977 13420990 chr3R 13421072 13421085 8 94 5.0 7.5 6.2 1.1 108 chr3R 13420977 exon Ir87a + chr3R 13421031 exon Ir87a + chr3R 13421085 exon Ir87a + chr3R_8_13420001 chr3R_13420001 RAL-805 1410 chr3R 13435234 13435408 chr3R 13435369 13435583 13 153 2.0 2.0 2.0 4.3 349 chr3R 13435234 intergenic yrt - chr3R 13435408 intergenic yrt - chr3R 13435583 intergenic not near genes chr3R_13_13435001 chr3R_13435001 RAL-805 1411 chr3R 13439591 13439598 chr3R 13439672 13439680 4 82 2.0 2.0 2.0 1.3 89 chr3R 13439591 intergenic CR42756 - chr3R 13439636 intergenic CR42756 - chr3R 13439680 intergenic CR42756 - chr3R_4_13435001 chr3R_13435001 RAL-805 1412 chr3R 13440910 13441071 chr3R 13441053 13441334 10 178 0.0 0.0 0.0 10.0 424 chr3R 13440910 intergenic not near genes chr3R 13441122 intergenic not near genes chr3R 13441334 intergenic not near genes chr3R_10_13440001 chr3R_13440001 RAL-805 1413 chr3R 13496629 13496641 chr3R 13496708 13496720 5 79 4.5 0.0 2.2 1.6 91 chr3R 13496629 intergenic not near genes chr3R 13496674 intergenic not near genes chr3R 13496720 intergenic not near genes chr3R_5_13495001 chr3R_13495001 RAL-805 1414 chr3R 13505856 13505861 chr3R 13505932 13505932 4 75 4.0 2.0 3.0 1.0 76 chr3R 13505856 intergenic not near genes chr3R 13505894 intergenic not near genes chr3R 13505932 intergenic not near genes chr3R_4_13505001 chr3R_13505001 RAL-805 1415 chr3R 13603054 13603351 chr3R 13603145 13603443 7 91 3.0 0.5 1.8 2.5 389 chr3R 13603054 intergenic not near genes chr3R 13603248 intergenic not near genes chr3R 13603443 intergenic not near genes chr3R_7_13600001 chr3R_13600001 RAL-805 1416 chr3R 13603357 13603372 chr3R 13603449 13603464 5 92 2.0 4.5 3.2 1.2 107 chr3R 13603357 intergenic not near genes chr3R 13603410 intergenic not near genes chr3R 13603464 intergenic not near genes chr3R_5_13600001 chr3R_13600001 RAL-805 1417 chr3R 13604060 13604091 chr3R 13604295 13604326 8 235 2.0 4.0 3.0 2.0 266 chr3R 13604060 intergenic not near genes chr3R 13604193 intergenic not near genes chr3R 13604326 intergenic not near genes chr3R_8_13600001 chr3R_13600001 RAL-805 1418 chr3R 13606705 13606728 chr3R 13606852 13606875 4 147 2.5 1.0 1.8 1.4 170 chr3R 13606705 intergenic CG9759 - chr3R 13606790 intergenic CG9759 - chr3R 13606875 intergenic CG9759 - chr3R_4_13605001 chr3R_13605001 RAL-805 1419 chr3R 13672939 13672978 chr3R 13673017 13673056 8 78 0.5 1.0 0.8 4.4 117 chr3R 13672939 intron Task6 - chr3R 13672998 intron Task6 - chr3R 13673056 intron Task6 - chr3R_8_13670001 chr3R_13670001 RAL-805 1420 chr3R 13714541 13714550 chr3R 13714680 13714689 4 139 0.5 4.0 2.2 1.2 148 chr3R 13714541 intergenic CR34044 - chr3R 13714615 intergenic CR34044 - chr3R 13714689 intergenic CR34044 - chr3R_4_13710001 chr3R_13710001 RAL-805 1421 chr3R 13738765 13738794 chr3R 13739153 13739185 11 390 2.5 3.0 2.8 2.9 420 chr3R 13738765 intron CG34383 + chr3R 13738975 intron CG34383 + chr3R 13739185 intron CG34383 + chr3R_11_13735001 chr3R_13735001 RAL-805 1422 chr3R 13863683 13863715 chr3R 13863769 13863803 9 86 2.0 4.5 3.2 2.1 120 chr3R 13863683 intergenic not near genes chr3R 13863743 intergenic not near genes chr3R 13863803 intergenic not near genes chr3R_9_13860001 chr3R_13860001 RAL-805 1423 chr3R 13880548 13880575 chr3R 13880669 13880696 6 121 5.0 2.0 3.5 1.3 148 chr3R 13880548 intergenic not near genes chr3R 13880622 intergenic not near genes chr3R 13880696 intergenic not near genes chr3R_6_13880001 chr3R_13880001 RAL-805 1424 chr3R 14037583 14037589 chr3R 14037664 14037664 5 79 1.5 3.5 2.5 1.4 81 chr3R 14037583 intergenic not near genes chr3R 14037624 intergenic not near genes chr3R 14037664 intergenic not near genes chr3R_5_14035001 chr3R_14035001 RAL-805 1425 chr3R 14049024 14049045 chr3R 14049104 14049125 4 80 3.5 3.0 3.2 1.0 101 chr3R 14049024 intergenic not near genes chr3R 14049074 intergenic not near genes chr3R 14049125 intergenic not near genes chr3R_4_14045001 chr3R_14045001 RAL-805 1426 chr3R 14062841 14062877 chr3R 14062918 14062954 8 77 1.0 3.5 2.2 2.5 113 chr3R 14062841 intron foxo + chr3R 14062898 intron foxo + chr3R 14062954 intron foxo + chr3R_8_14060001 chr3R_14060001 RAL-805 1427 chr3R 14070128 14070146 chr3R 14070209 14070224 5 80 5.5 2.0 3.8 1.0 96 chr3R 14070128 intron foxo + chr3R 14070176 intron foxo + chr3R 14070224 intron foxo + chr3R_5_14070001 chr3R_14070001 RAL-805 1428 chr3R 14091516 14091538 chr3R 14091595 14091617 5 79 2.5 0.0 1.2 2.3 101 chr3R 14091516 intron Npc2b + chr3R 14091566 intron Npc2b + chr3R 14091617 intron Npc2b + chr3R_5_14090001 chr3R_14090001 RAL-805 1429 chr3R 14117443 14117471 chr3R 14117519 14117546 5 76 1.5 3.5 2.5 1.4 103 chr3R 14117443 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117546 intron Kif19A - chr3R_5_14115001 chr3R_14115001 RAL-805 1430 chr3R 14166680 14166699 chr3R 14167325 14167338 4 643 3.0 4.5 3.8 0.8 658 chr3R 14166680 3` UTR Dop1R1 - chr3R 14167009 3` UTR Dop1R1 - chr3R 14167338 3` UTR Dop1R1 - chr3R_4_14165001 chr3R_14165001 RAL-805 1431 chr3R 14174955 14174991 chr3R 14175042 14175078 12 86 3.5 4.5 4.0 2.4 123 chr3R 14174955 3` UTR Dop1R1 - chr3R 14175016 3` UTR Dop1R1 - chr3R 14175078 3` UTR Dop1R1 - chr3R_12_14175001 chr3R_14175001 RAL-805 1432 chr3R 14246398 14246417 chr3R 14247894 14247913 jockey 6 1492 1.0 4.0 2.5 1.7 1515 chr3R 14246398 intergenic not near genes chr3R 14247156 intergenic not near genes chr3R 14247913 intergenic not near genes chr3R_6_14245001 chr3R_14245001 RAL-805 1433 chr3R 14327690 14327720 chr3R 14327772 14327802 7 82 3.0 3.0 3.0 1.8 112 chr3R 14327690 3` UTR CG3321 + chr3R 14327746 intergenic CG3321 +,spn-B + chr3R 14327802 intergenic CG3321 +,spn-B + chr3R_7_14325001 chr3R_14325001 RAL-805 1434 chr3R 14347472 14347478 chr3R 14348449 14348473 4 990 5.0 1.0 3.0 1.0 1001 chr3R 14347472 intron NK7.1 - chr3R 14347972 intron NK7.1 - chr3R 14348473 intron NK7.1 - chr3R_4_14345001 chr3R_14345001 RAL-805 1435 chr3R 14354074 14354099 chr3R 14354395 14354419 7 320 4.5 2.5 3.5 1.6 345 chr3R 14354074 intron NK7.1 - chr3R 14354246 intron NK7.1 - chr3R 14354419 intron NK7.1 - chr3R_7_14350001 chr3R_14350001 RAL-805 1436 chr3R 14364067 14364092 chr3R 14364143 14364166 8 74 5.5 3.5 4.5 1.5 99 chr3R 14364067 intron NK7.1 - chr3R 14364116 intron NK7.1 - chr3R 14364166 intron NK7.1 - chr3R_8_14360001 chr3R_14360001 RAL-805 1437 chr3R 14386038 14386042 chr3R 14386106 14386126 4 80 0.0 3.5 1.8 1.4 88 chr3R 14386038 intergenic not near genes chr3R 14386082 intergenic not near genes chr3R 14386126 intergenic not near genes chr3R_4_14385001 chr3R_14385001 RAL-805 1438 chr3R 14458885 14458905 chr3R 14458966 14458985 7 81 4.5 1.5 3.0 1.8 100 chr3R 14458885 intron cv-c - chr3R 14458935 intron cv-c - chr3R 14458985 intron cv-c - chr3R_7_14455001 chr3R_14455001 RAL-805 1439 chr3R 14497414 14497431 chr3R 14497495 14497512 6 80 3.0 0.5 1.8 2.1 98 chr3R 14497414 intron CR44177 + chr3R 14497463 intron CR44177 + chr3R 14497512 intron CR44177 + chr3R_6_14495001 chr3R_14495001 RAL-805 1440 chr3R 14796303 14796328 chr3R 14796452 14796477 5 148 3.0 2.0 2.5 1.4 174 chr3R 14796303 intergenic CG14855 +,jvl + chr3R 14796390 5` UTR CG14855 + chr3R 14796477 5` UTR CG14855 + chr3R_5_14795001 chr3R_14795001 RAL-805 1441 chr3R 14898474 14898503 chr3R 14898594 14898623 6 120 2.0 0.5 1.2 2.7 149 chr3R 14898474 intergenic Nup93-2 -,CG3817 + chr3R 14898548 intergenic Nup93-2 -,CG3817 + chr3R 14898623 intergenic CG3817 +,Nup93-2 - chr3R_6_14895001 chr3R_14895001 RAL-805 1442 chr3R 14924373 14924404 chr3R 14924460 14924491 10 87 2.0 4.5 3.2 2.4 118 chr3R 14924373 intergenic not near genes chr3R 14924432 intergenic not near genes chr3R 14924491 intergenic not near genes chr3R_10_14920001 chr3R_14920001 RAL-805 1443 chr3R 14973595 14973622 chr3R 14974072 14974111 6 485 1.5 3.5 2.5 1.7 516 chr3R 14973595 intergenic not near genes chr3R 14973853 intergenic not near genes chr3R 14974111 intergenic not near genes chr3R_6_14970001 chr3R_14970001 RAL-805 1444 chr3R 15026330 15026341 chr3R 15026416 15026427 4 86 4.0 3.0 3.5 0.9 97 chr3R 15026330 intergenic not near genes chr3R 15026378 intergenic not near genes chr3R 15026427 intergenic not near genes chr3R_4_15025001 chr3R_15025001 RAL-805 1445 chr3R 15079807 15079839 chr3R 15080048 15080080 pogo 8 240 1.5 0.0 0.8 4.4 273 chr3R 15079807 3` UTR CG6966 - chr3R 15079944 3` UTR CG6966 - chr3R 15080080 3` UTR CG6966 - chr3R_8_15075001 chr3R_15075001 RAL-805 1446 chr3R 15102500 15102528 chr3R 15109756 15109783 412 6 7256 2.0 1.5 1.8 2.1 7283 chr3R 15102500 intron CG42788 - chr3R 15106142 intron CG42788 - chr3R 15109783 intron CG42788 - chr3R_6_15105001 chr3R_15105001 RAL-805 1447 chr3R 15132058 15132081 chr3R 15135118 15135141 Juan 11 3059 4.0 4.5 4.2 2.1 3083 chr3R 15132058 intergenic CG42788 - chr3R 15133600 intergenic not near genes chr3R 15135141 3` UTR CG6912 - chr3R_11_15130001 chr3R_15130001 RAL-805 1448 chr3R 15162545 15162555 chr3R 15167313 15167322 F-element 5 4767 1.0 0.0 0.5 3.3 4777 chr3R 15162545 intron Gyc88E + chr3R 15164934 intron Gyc88E + chr3R 15167322 intron Gyc88E + chr3R_5_15160001 chr3R_15160001 RAL-805 1449 chr3R 15406156 15406167 chr3R 15406229 15406236 5 76 1.0 0.5 0.8 2.8 80 chr3R 15406156 intron CG6125 - chr3R 15406196 intron CG6125 - chr3R 15406236 intron CG6125 - chr3R_5_15405001 chr3R_15405001 RAL-805 1450 chr3R 15416249 15416278 chr3R 15416329 15416358 6 75 1.0 6.5 3.8 1.2 109 chr3R 15416249 3` UTR Atx2 + chr3R 15416304 3` UTR Atx2 + chr3R 15416358 3` UTR Atx2 + chr3R_6_15415001 chr3R_15415001 RAL-805 1451 chr3R 15450905 15450923 chr3R 15451009 15451027 8 106 3.0 3.0 3.0 2.0 122 chr3R 15450905 intron AdamTS-A - chr3R 15450966 intron AdamTS-A - chr3R 15451027 intron AdamTS-A - chr3R_8_15450001 chr3R_15450001 RAL-805 1452 chr3R 15498897 15498924 chr3R 15499012 15499038 7 112 3.5 4.5 4.0 1.4 141 chr3R 15498897 intergenic not near genes chr3R 15498968 intergenic not near genes chr3R 15499038 intergenic not near genes chr3R_7_15495001 chr3R_15495001 RAL-805 1453 chr3R 15601179 15601196 chr3R 15608685 15608718 412 7 7517 5.0 2.0 3.5 1.6 7539 chr3R 15601179 intergenic not near genes chr3R 15604948 intergenic not near genes chr3R 15608718 intergenic not near genes chr3R_7_15600001 chr3R_15600001 RAL-805 1454 chr3R 15618732 15618752 chr3R 15626206 15626226 blood 6 7474 2.0 8.5 5.2 1.0 7494 chr3R 15618732 intergenic not near genes chr3R 15622479 intergenic not near genes chr3R 15626226 intergenic not near genes chr3R_6_15620001 chr3R_15620001 RAL-805 1455 chr3R 15641513 15641538 chr3R 15641602 15641627 11 88 4.5 2.5 3.5 2.4 114 chr3R 15641513 intergenic not near genes chr3R 15641570 intergenic not near genes chr3R 15641627 intergenic not near genes chr3R_11_15640001 chr3R_15640001 RAL-805 1456 chr3R 15691186 15691322 chr3R 15691291 15691409 8 89 0.5 0.5 0.5 5.3 223 chr3R 15691186 intergenic not near genes chr3R 15691298 intergenic not near genes chr3R 15691409 intergenic not near genes chr3R_8_15690001 chr3R_15690001 RAL-805 1457 chr3R 15734196 15734201 chr3R 15734285 15734292 4 90 1.5 4.0 2.8 1.1 96 chr3R 15734196 intergenic not near genes chr3R 15734244 intergenic not near genes chr3R 15734292 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-805 1458 chr3R 15790135 15790286 chr3R 15790243 15790404 14 113 4.5 9.5 7.0 1.8 269 chr3R 15790135 exon c(3)G - chr3R 15790270 exon c(3)G - chr3R 15790404 exon c(3)G - chr3R_14_15790001 chr3R_15790001 RAL-805 1459 chr3R 15790379 15790406 chr3R 15790585 15790612 11 202 11.5 15.5 13.5 0.8 233 chr3R 15790379 exon c(3)G - chr3R 15790496 exon c(3)G - chr3R 15790612 exon c(3)G - chr3R_11_15790001 chr3R_15790001 RAL-805 1460 chr3R 15790837 15790873 chr3R 15790952 15790989 18 115 16.0 22.0 19.0 0.9 152 chr3R 15790837 exon c(3)G - chr3R 15790913 intron c(3)G - chr3R 15790989 exon c(3)G - chr3R_18_15790001 chr3R_15790001 RAL-805 1461 chr3R 15868939 15868955 chr3R 15869019 15869032 6 79 1.5 0.0 0.8 3.3 93 chr3R 15868939 intron CG31183 - chr3R 15868986 intron CG31183 - chr3R 15869032 intron CG31183 - chr3R_6_15865001 chr3R_15865001 RAL-805 1462 chr3R 16013131 16013154 chr3R 16013217 16013242 4 86 2.5 5.0 3.8 0.8 111 chr3R 16013131 intron GATAe + chr3R 16013186 intron GATAe + chr3R 16013242 intron GATAe + chr3R_4_16010001 chr3R_16010001 RAL-805 1463 chr3R 16033411 16033442 chr3R 16033492 16033523 5 81 1.0 1.0 1.0 2.5 112 chr3R 16033411 intron pnr + chr3R 16033467 intron pnr + chr3R 16033523 intron pnr + chr3R_5_16030001 chr3R_16030001 RAL-805 1464 chr3R 16048851 16048879 chr3R 16048941 16048968 9 85 4.5 6.0 5.2 1.5 117 chr3R 16048851 intron ird5 - chr3R 16048910 intron ird5 - chr3R 16048968 intron ird5 - chr3R_9_16045001 chr3R_16045001 RAL-805 1465 chr3R 16215107 16215129 chr3R 16215212 16215234 4 105 1.0 2.0 1.5 1.6 127 chr3R 16215107 intergenic CR45641 + chr3R 16215170 intergenic CR45641 + chr3R 16215234 intergenic CR45641 + chr3R_4_16215001 chr3R_16215001 RAL-805 1466 chr3R 16246539 16246551 chr3R 16246615 16246627 6 75 0.0 5.0 2.5 1.7 88 chr3R 16246539 intron tara + chr3R 16246583 intron tara + chr3R 16246627 intron tara + chr3R_6_16245001 chr3R_16245001 RAL-805 1467 chr3R 16374301 16374331 chr3R 16374418 16374448 5 117 1.5 0.5 1.0 2.5 147 chr3R 16374301 intergenic ss - chr3R 16374374 intergenic ss - chr3R 16374448 3` UTR ss - chr3R_5_16370001 chr3R_16370001 RAL-805 1468 chr3R 16464509 16464542 chr3R 16464697 16464730 10 187 1.5 5.0 3.2 2.4 221 chr3R 16464509 exon CG42232 - chr3R 16464620 exon CG42232 - chr3R 16464730 exon CG42232 - chr3R_10_16460001 chr3R_16460001 RAL-805 1469 chr3R 16508158 16508192 chr3R 16508244 16508278 11 86 3.0 3.0 3.0 2.8 120 chr3R 16508158 intron CG42342 + chr3R 16508218 intron CG42342 + chr3R 16508278 intron CG42342 + chr3R_11_16505001 chr3R_16505001 RAL-805 1470 chr3R 16731944 16732067 chr3R 16732024 16732144 6 78 2.0 2.5 2.2 1.9 200 chr3R 16731944 intron Ubx - chr3R 16732044 intron Ubx - chr3R 16732144 intron Ubx - chr3R_6_16730001 chr3R_16730001 RAL-805 1471 chr3R 16756333 16756348 chr3R 16762524 16762539 diver 4 6191 3.5 2.5 3.0 1.0 6206 chr3R 16756333 intron bxd - chr3R 16759436 intron bxd - chr3R 16762539 intron bxd - chr3R_4_16755001 chr3R_16755001 RAL-805 1472 chr3R 16921831 16921865 chr3R 16921915 16921949 4 84 1.0 3.5 2.2 1.2 118 chr3R 16921831 intron iab-8 - chr3R 16921890 intron iab-8 - chr3R 16921949 intron iab-8 - chr3R_4_16920001 chr3R_16920001 RAL-805 1473 chr3R 17121522 17121555 chr3R 17121716 17121750 8 195 1.5 2.0 1.8 2.9 228 chr3R 17121522 intron cher - chr3R 17121636 intron,exon cher -,CG42779 + chr3R 17121750 intron,exon cher -,CG42779 + chr3R_8_17120001 chr3R_17120001 RAL-805 1474 chr3R 17163471 17163494 chr3R 17163552 17163575 8 81 0.0 3.5 1.8 2.9 104 chr3R 17163471 intron Mur89F - chr3R 17163523 intron Mur89F - chr3R 17163575 intron Mur89F - chr3R_8_17160001 chr3R_17160001 RAL-805 1475 chr3R 17225076 17225105 chr3R 17225154 17225183 4 78 2.5 3.0 2.8 1.1 107 chr3R 17225076 intergenic not near genes chr3R 17225130 intergenic not near genes chr3R 17225183 intergenic not near genes chr3R_4_17225001 chr3R_17225001 RAL-805 1476 chr3R 17294670 17294680 chr3R 17295098 17295108 BS 4 428 5.0 0.0 2.5 1.1 438 chr3R 17294670 intergenic not near genes chr3R 17294889 intergenic not near genes chr3R 17295108 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-805 1477 chr3R 17335157 17335182 chr3R 17335233 17335257 7 75 3.0 2.5 2.8 1.8 100 chr3R 17335157 intron beat-IIa - chr3R 17335207 intron beat-IIa - chr3R 17335257 intron beat-IIa - chr3R_7_17335001 chr3R_17335001 RAL-805 1478 chr3R 17346699 17346718 chr3R 17348262 17348281 F-element 10 1563 0.0 5.0 2.5 2.9 1582 chr3R 17346699 intron beat-IIa - chr3R 17347490 intron beat-IIa - chr3R 17348281 intron beat-IIa - chr3R_10_17345001 chr3R_17345001 RAL-805 1479 chr3R 17355490 17355520 chr3R 17355568 17355598 7 78 2.5 3.5 3.0 1.8 108 chr3R 17355490 intron beat-IIa - chr3R 17355544 intron beat-IIa - chr3R 17355598 intron beat-IIa - chr3R_7_17355001 chr3R_17355001 RAL-805 1480 chr3R 17461202 17461229 chr3R 17461284 17461311 9 82 2.0 2.0 2.0 3.0 109 chr3R 17461202 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461311 intergenic not near genes chr3R_9_17460001 chr3R_17460001 RAL-805 1481 chr3R 17531906 17531914 chr3R 17531983 17531991 6 77 0.5 7.0 3.8 1.2 85 chr3R 17531906 intergenic CG5823 - chr3R 17531948 intergenic CG5823 - chr3R 17531991 intergenic CG5823 - chr3R_6_17530001 chr3R_17530001 RAL-805 1482 chr3R 17546374 17546398 chr3R 17546457 17546481 8 83 4.0 2.5 3.2 1.9 107 chr3R 17546374 exon Prx3 - chr3R 17546428 5` UTR Prx3 - chr3R 17546481 5` UTR Prx3 - chr3R_8_17545001 chr3R_17545001 RAL-805 1483 chr3R 17554353 17554379 chr3R 17554630 17554655 13 276 7.0 4.0 5.5 2.0 302 chr3R 17554353 intergenic not near genes chr3R 17554504 intergenic not near genes chr3R 17554655 intergenic not near genes chr3R_13_17550001 chr3R_17550001 RAL-805 1484 chr3R 17638316 17638331 chr3R 17638802 17638817 roo 4 486 0.0 2.0 1.0 2.0 501 chr3R 17638316 intron CG43175 + chr3R 17638566 intron CG43175 + chr3R 17638817 intron,intron CG43175 +,CR45222 + chr3R_4_17635001 chr3R_17635001 RAL-805 1485 chr3R 17725074 17725083 chr3R 17725168 17725177 4 94 4.5 0.0 2.2 1.2 103 chr3R 17725074 intergenic Atg8b - chr3R 17725126 intergenic Atg8b - chr3R 17725177 intergenic Atg8b - chr3R_4_17725001 chr3R_17725001 RAL-805 1486 chr3R 17823196 17823234 chr3R 17823273 17823311 6 77 2.5 0.5 1.5 2.4 115 chr3R 17823196 intron tinc + chr3R 17823254 intron tinc + chr3R 17823311 intron tinc + chr3R_6_17820001 chr3R_17820001 RAL-805 1487 chr3R 17845206 17845216 chr3R 17845267 17845273 8 68 2.0 6.0 4.0 1.6 67 chr3R 17845206 intron tinc + chr3R 17845240 intron tinc + chr3R 17845273 intron tinc + chr3R_8_17845001 chr3R_17845001 RAL-805 1488 chr3R 17925852 17925889 chr3R 17927319 17927356 hobo 7 1466 3.5 6.5 5.0 1.2 1504 chr3R 17925852 intron cpo + chr3R 17926604 intron cpo + chr3R 17927356 intron cpo + chr3R_7_17925001 chr3R_17925001 RAL-805 1489 chr3R 18032792 18032802 chr3R 18040465 18040475 opus 5 7673 0.0 3.0 1.5 2.0 7683 chr3R 18032792 intergenic not near genes chr3R 18036634 intergenic not near genes chr3R 18040475 intergenic not near genes chr3R_5_18035001 chr3R_18035001 RAL-805 1490 chr3R 18041758 18041773 chr3R 18041835 18041850 5 77 0.0 0.5 0.2 4.2 92 chr3R 18041758 intergenic not near genes chr3R 18041804 intergenic not near genes chr3R 18041850 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-805 1491 chr3R 18060319 18060338 chr3R 18060413 18060432 5 93 4.0 4.0 4.0 1.0 113 chr3R 18060319 intergenic not near genes chr3R 18060376 intergenic not near genes chr3R 18060432 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-805 1492 chr3R 18078155 18078180 chr3R 18078234 18078256 6 78 3.5 0.0 1.8 2.1 101 chr3R 18078155 intergenic not near genes chr3R 18078206 intergenic not near genes chr3R 18078256 intergenic not near genes chr3R_6_18075001 chr3R_18075001 RAL-805 1493 chr3R 18089080 18089108 chr3R 18089165 18089193 8 85 0.5 0.5 0.5 5.3 113 chr3R 18089080 intergenic not near genes chr3R 18089136 intergenic not near genes chr3R 18089193 intergenic not near genes chr3R_8_18085001 chr3R_18085001 RAL-805 1494 chr3R 18237565 18237597 chr3R 18237656 18237688 8 90 3.0 1.5 2.2 2.5 123 chr3R 18237565 intron repo + chr3R 18237626 intron repo + chr3R 18237688 intron repo + chr3R_8_18235001 chr3R_18235001 RAL-805 1495 chr3R 18379628 18379658 chr3R 18379934 18379964 6 306 2.0 3.0 2.5 1.7 336 chr3R 18379628 intron CG7675 - chr3R 18379796 intron CG7675 - chr3R 18379964 intron CG7675 - chr3R_6_18375001 chr3R_18375001 RAL-805 1496 chr3R 18473235 18473255 chr3R 18473322 18473342 5 87 0.0 0.0 0.0 5.0 107 chr3R 18473235 intron fru - chr3R 18473288 intron fru - chr3R 18473342 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-805 1497 chr3R 18543827 18543859 chr3R 18543904 18543935 13 77 3.5 5.0 4.2 2.5 108 chr3R 18543827 intron fru - chr3R 18543881 intron fru - chr3R 18543935 intron fru - chr3R_13_18540001 chr3R_18540001 RAL-805 1498 chr3R 18617722 18617741 chr3R 18617802 18617820 5 80 1.0 0.5 0.8 2.8 98 chr3R 18617722 intron,intron qin +,CG14304 - chr3R 18617771 intron,intron qin +,CG14304 - chr3R 18617820 intron,intron qin +,CG14304 - chr3R_5_18615001 chr3R_18615001 RAL-805 1499 chr3R 18695763 18695774 chr3R 18695847 18695858 4 84 3.5 0.0 1.8 1.4 95 chr3R 18695763 3` UTR CG34282 + chr3R 18695810 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_4_18695001 chr3R_18695001 RAL-805 1500 chr3R 18766777 18766810 chr3R 18766855 18766882 12 77 3.5 3.0 3.2 2.9 105 chr3R 18766777 intron CG7720 - chr3R 18766830 intron CG7720 - chr3R 18766882 intron CG7720 - chr3R_12_18765001 chr3R_18765001 RAL-805 1501 chr3R 18785867 18785904 chr3R 18785941 18785981 7 76 2.0 2.5 2.2 2.2 114 chr3R 18785867 intron CG7720 - chr3R 18785924 intron CG7720 - chr3R 18785981 intron CG7720 - chr3R_7_18785001 chr3R_18785001 RAL-805 1502 chr3R 18791501 18791516 chr3R 18791580 18791594 4 78 2.5 1.5 2.0 1.3 93 chr3R 18791501 intron CG7720 - chr3R 18791548 intron CG7720 - chr3R 18791594 intron CG7720 - chr3R_4_18790001 chr3R_18790001 RAL-805 1503 chr3R 18812080 18812108 chr3R 18812158 18812186 12 78 3.5 5.5 4.5 2.2 106 chr3R 18812080 intron CG18208 - chr3R 18812133 intron CG18208 - chr3R 18812186 intron CG18208 - chr3R_12_18810001 chr3R_18810001 RAL-805 1504 chr3R 19033935 19033953 chr3R 19034008 19034030 6 74 3.5 3.0 3.2 1.4 95 chr3R 19033935 intron CG6026 + chr3R 19033982 intron CG6026 + chr3R 19034030 intron CG6026 + chr3R_6_19030001 chr3R_19030001 RAL-805 1505 chr3R 19106820 19106851 chr3R 19106910 19106937 1360 7 87 2.5 0.0 1.2 3.2 117 chr3R 19106820 intron CG6040 + chr3R 19106878 intron CG6040 + chr3R 19106937 intron CG6040 + chr3R_7_19105001 chr3R_19105001 RAL-805 1506 chr3R 19133887 19133912 chr3R 19136509 19136527 4 2620 3.5 60.0 31.8 0.1 2640 chr3R 19133887 intron Cyp12a5 + chr3R 19135207 5` UTR Cyp12a4 + chr3R 19136527 exon Cyp12a4 + chr3R_4_19135001 chr3R_19135001 RAL-805 1507 chr3R 19136407 19136443 chr3R 19139794 19139871 Bari1 5 3395 49.5 18.0 33.8 0.1 3464 chr3R 19136407 exon Cyp12a4 + chr3R 19138139 intergenic not near genes chr3R 19139871 3` UTR Ppcs - chr3R_5_19135001 chr3R_19135001 RAL-805 1508 chr3R 19140265 19140301 chr3R 19140713 19140749 11 446 1.0 2.5 1.8 3.9 484 chr3R 19140265 3` UTR Ppcs - chr3R 19140507 3` UTR Ppcs - chr3R 19140749 3` UTR Ppcs - chr3R_11_19140001 chr3R_19140001 RAL-805 1509 chr3R 19193008 19193013 chr3R 19197310 19197311 F-element 4 4302 0.0 4.5 2.2 1.2 4303 chr3R 19193008 intron CG31475 + chr3R 19195160 intron CG31475 + chr3R 19197311 intron CG31475 + chr3R_4_19195001 chr3R_19195001 RAL-805 1510 chr3R 19207388 19207408 chr3R 19207475 19207495 7 88 2.5 1.0 1.8 2.5 107 chr3R 19207388 intergenic not near genes chr3R 19207442 intergenic not near genes chr3R 19207495 intergenic not near genes chr3R_7_19205001 chr3R_19205001 RAL-805 1511 chr3R 19207412 19207417 chr3R 19207474 19207487 4 73 1.5 1.0 1.2 1.8 75 chr3R 19207412 intergenic not near genes chr3R 19207450 intergenic not near genes chr3R 19207487 intergenic not near genes chr3R_4_19205001 chr3R_19205001 RAL-805 1512 chr3R 19265666 19265670 chr3R 19265748 19265752 4 82 3.5 0.0 1.8 1.4 86 chr3R 19265666 intergenic not near genes chr3R 19265709 intergenic not near genes chr3R 19265752 intergenic not near genes chr3R_4_19265001 chr3R_19265001 RAL-805 1513 chr3R 19276932 19276947 chr3R 19277012 19277027 6 80 1.0 3.5 2.2 1.9 95 chr3R 19276932 intergenic not near genes chr3R 19276980 intergenic not near genes chr3R 19277027 intergenic not near genes chr3R_6_19275001 chr3R_19275001 RAL-805 1514 chr3R 19340398 19340428 chr3R 19340475 19340505 10 76 2.5 3.0 2.8 2.6 107 chr3R 19340398 intergenic not near genes chr3R 19340452 intergenic not near genes chr3R 19340505 intergenic not near genes chr3R_10_19340001 chr3R_19340001 RAL-805 1515 chr3R 19344671 19344695 chr3R 19344801 19344830 8 134 3.0 1.0 2.0 2.7 159 chr3R 19344671 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344830 intergenic not near genes chr3R_8_19340001 chr3R_19340001 RAL-805 1516 chr3R 19475239 19475254 chr3R 19475768 19475783 8 528 7.0 2.5 4.8 1.4 544 chr3R 19475239 intron Dys + chr3R 19475511 intron Dys + chr3R 19475783 intron Dys + chr3R_8_19475001 chr3R_19475001 RAL-805 1517 chr3R 19532997 19533008 chr3R 19533189 19533199 4 191 7.0 0.0 3.5 0.9 202 chr3R 19532997 intron Dys + chr3R 19533098 intron Dys + chr3R 19533199 intron Dys + chr3R_4_19530001 chr3R_19530001 RAL-805 1518 chr3R 19550073 19550096 chr3R 19550181 19550205 4 106 2.5 2.5 2.5 1.1 132 chr3R 19550073 intron Dys + chr3R 19550139 intron Dys + chr3R 19550205 intron Dys + chr3R_4_19550001 chr3R_19550001 RAL-805 1519 chr3R 19570316 19570336 chr3R 19570392 19570412 8 75 2.5 5.5 4.0 1.6 96 chr3R 19570316 intron Dys + chr3R 19570364 intron Dys + chr3R 19570412 intron Dys + chr3R_8_19570001 chr3R_19570001 RAL-805 1520 chr3R 19604677 19604710 chr3R 19604809 19604843 7 133 2.0 2.0 2.0 2.3 166 chr3R 19604677 exon CG7342 + chr3R 19604760 intron CG7342 + chr3R 19604843 intron CG7342 + chr3R_7_19600001 chr3R_19600001 RAL-805 1521 chr3R 19611992 19612015 chr3R 19616025 19616048 7 4033 15.5 13.5 14.5 0.5 4056 chr3R 19611992 exon CG17752 + chr3R 19614020 exon CG16727 + chr3R 19616048 3` UTR CG6231 - chr3R_7_19610001 chr3R_19610001 RAL-805 1522 chr3R 19668660 19668680 chr3R 19668729 19668746 5 68 3.0 3.0 3.0 1.2 86 chr3R 19668660 exon CG7432 + chr3R 19668703 exon CG7432 + chr3R 19668746 exon CG7432 + chr3R_5_19665001 chr3R_19665001 RAL-805 1523 chr3R 19702321 19702336 chr3R 19702403 19702416 6 81 6.5 2.5 4.5 1.1 95 chr3R 19702321 intergenic not near genes chr3R 19702368 intergenic not near genes chr3R 19702416 intergenic not near genes chr3R_6_19700001 chr3R_19700001 RAL-805 1524 chr3R 19716216 19716247 chr3R 19716293 19716324 5 77 0.5 0.0 0.2 4.2 108 chr3R 19716216 intergenic CG34286 - chr3R 19716270 intergenic CG34286 - chr3R 19716324 intergenic CG34286 - chr3R_5_19715001 chr3R_19715001 RAL-805 1525 chr3R 19824588 19824610 chr3R 19826254 19826276 6 1666 0.5 5.5 3.0 1.5 1688 chr3R 19824588 intron bnl - chr3R 19825432 intron bnl - chr3R 19826276 intron bnl - chr3R_6_19825001 chr3R_19825001 RAL-805 1526 chr3R 19839528 19839561 chr3R 19839760 19839792 11 232 2.5 2.5 2.5 3.1 264 chr3R 19839528 intergenic not near genes chr3R 19839660 intergenic not near genes chr3R 19839792 intergenic not near genes chr3R_11_19835001 chr3R_19835001 RAL-805 1527 chr3R 20008819 20008843 chr3R 20008900 20008918 9 80 1.0 2.5 1.8 3.2 99 chr3R 20008819 intergenic MED25 +,Hs6st - chr3R 20008868 intergenic MED25 +,Hs6st - chr3R 20008918 intergenic MED25 +,Hs6st - chr3R_9_20005001 chr3R_20005001 RAL-805 1528 chr3R 20020163 20020178 chr3R 20020295 20020320 4 139 3.5 3.5 3.5 0.9 157 chr3R 20020163 intron CG4433 - chr3R 20020242 intron CG4433 - chr3R 20020320 intron CG4433 - chr3R_4_20020001 chr3R_20020001 RAL-805 1529 chr3R 20060632 20060652 chr3R 20060714 20060735 7 83 5.0 4.5 4.8 1.2 103 chr3R 20060632 intergenic not near genes chr3R 20060684 intergenic not near genes chr3R 20060735 intergenic not near genes chr3R_7_20060001 chr3R_20060001 RAL-805 1530 chr3R 20109537 20109568 chr3R 20114743 20114771 copia 12 5206 0.5 4.0 2.2 3.8 5234 chr3R 20109537 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114771 intergenic CG10887 + chr3R_12_20110001 chr3R_20110001 RAL-805 1531 chr3R 20205562 20205593 chr3R 20205685 20205715 9 122 3.0 2.0 2.5 2.6 153 chr3R 20205562 intron Nlg4 + chr3R 20205638 intron Nlg4 + chr3R 20205715 intron Nlg4 + chr3R_9_20205001 chr3R_20205001 RAL-805 1532 chr3R 20242577 20242610 chr3R 20242680 20242713 8 103 2.0 1.0 1.5 3.2 136 chr3R 20242577 intron Nlg4 + chr3R 20242645 intron Nlg4 + chr3R 20242713 intron Nlg4 + chr3R_8_20240001 chr3R_20240001 RAL-805 1533 chr3R 20245290 20245295 chr3R 20248898 20248905 F-element 4 3610 1.0 0.0 0.5 2.7 3615 chr3R 20245290 3` UTR Nlg4 + chr3R 20247098 intergenic not near genes chr3R 20248905 intergenic not near genes chr3R_4_20245001 chr3R_20245001 RAL-805 1534 chr3R 20252230 20252251 chr3R 20252308 20252329 4 78 0.0 0.0 0.0 4.0 99 chr3R 20252230 intergenic not near genes chr3R 20252280 intergenic cic + chr3R 20252329 intergenic cic + chr3R_4_20250001 chr3R_20250001 RAL-805 1535 chr3R 20256853 20256871 chr3R 20256931 20256949 9 77 0.0 4.0 2.0 3.0 96 chr3R 20256853 intron cic + chr3R 20256901 intron cic + chr3R 20256949 intron cic + chr3R_9_20255001 chr3R_20255001 RAL-805 1536 chr3R 20266521 20266545 chr3R 20272991 20273016 Burdock 14 6471 1.5 2.5 2.0 4.7 6495 chr3R 20266521 intron cic + chr3R 20269768 intron cic + chr3R 20273016 intron cic + chr3R_14_20265001 chr3R_20265001 RAL-805 1537 chr3R 20282275 20282304 chr3R 20282351 20282380 9 76 0.5 1.0 0.8 5.0 105 chr3R 20282275 intron cic + chr3R 20282328 intron cic + chr3R 20282380 intron cic + chr3R_9_20280001 chr3R_20280001 RAL-805 1538 chr3R 20433103 20433129 chr3R 20433193 20433219 8 90 4.0 1.5 2.8 2.1 116 chr3R 20433103 intron Gfrl - chr3R 20433161 intron Gfrl - chr3R 20433219 intron Gfrl - chr3R_8_20430001 chr3R_20430001 RAL-805 1539 chr3R 20506588 20506615 chr3R 20507391 20507418 BS 4 803 4.0 4.0 4.0 0.8 830 chr3R 20506588 intergenic Or92a + chr3R 20507003 intergenic CG4288 - chr3R 20507418 3` UTR CG4288 - chr3R_4_20505001 chr3R_20505001 RAL-805 1540 chr3R 20516543 20516560 chr3R 20516899 20516915 10 355 4.5 3.0 3.8 2.1 372 chr3R 20516543 intergenic not near genes chr3R 20516729 intergenic not near genes chr3R 20516915 intergenic not near genes chr3R_10_20515001 chr3R_20515001 RAL-805 1541 chr3R 20594486 20594511 chr3R 20594576 20594600 4 90 1.5 0.0 0.8 2.2 114 chr3R 20594486 intron bon + chr3R 20594543 intron bon + chr3R 20594600 intron bon + chr3R_4_20590001 chr3R_20590001 RAL-805 1542 chr3R 20596199 20596296 chr3R 20596285 20596476 7 155 0.0 0.0 0.0 7.0 277 chr3R 20596199 intron bon + chr3R 20596338 intron bon + chr3R 20596476 intron bon + chr3R_7_20595001 chr3R_20595001 RAL-805 1543 chr3R 20601605 20601631 chr3R 20601698 20601740 6 103 2.0 1.5 1.8 2.1 135 chr3R 20601605 intron bon + chr3R 20601672 intron bon + chr3R 20601740 intron bon + chr3R_6_20600001 chr3R_20600001 RAL-805 1544 chr3R 20716842 20716869 chr3R 20717148 20717175 10 306 4.0 5.0 4.5 1.8 333 chr3R 20716842 intergenic not near genes chr3R 20717008 intergenic not near genes chr3R 20717175 intergenic not near genes chr3R_10_20715001 chr3R_20715001 RAL-805 1545 chr3R 20771711 20771731 chr3R 20771792 20771798 5 78 0.0 5.5 2.8 1.3 87 chr3R 20771711 intron,intron Syp +,Takl1 - chr3R 20771754 intron,intron Syp +,Takl1 - chr3R 20771798 intron,exon Syp +,Takl1 - chr3R_5_20770001 chr3R_20770001 RAL-805 1546 chr3R 20787445 20787456 chr3R 20787528 20787545 4 88 3.5 1.5 2.5 1.1 100 chr3R 20787445 intron Syp + chr3R 20787495 intron Syp + chr3R 20787545 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-805 1547 chr3R 20854485 20854511 chr3R 20859275 20859301 Doc 8 4788 9.0 4.0 6.5 1.1 4816 chr3R 20854485 intron Ir93a - chr3R 20856893 intron Ir93a - chr3R 20859301 exon Ir93a - chr3R_8_20855001 chr3R_20855001 RAL-805 1548 chr3R 20870255 20870280 chr3R 20870340 20870362 11 83 2.5 2.0 2.2 3.4 107 chr3R 20870255 intergenic not near genes chr3R 20870308 intergenic not near genes chr3R 20870362 intergenic not near genes chr3R_11_20870001 chr3R_20870001 RAL-805 1549 chr3R 20901659 20901687 chr3R 20901762 20901790 6 101 4.0 3.0 3.5 1.3 131 chr3R 20901659 intergenic CG5621 + chr3R 20901724 intergenic CG5621 + chr3R 20901790 intergenic CG5621 + chr3R_6_20900001 chr3R_20900001 RAL-805 1550 chr3R 21014016 21014043 chr3R 21014094 21014121 10 78 3.0 2.5 2.8 2.6 105 chr3R 21014016 3` UTR Calx + chr3R 21014068 3` UTR Calx + chr3R 21014121 3` UTR Calx + chr3R_10_21010001 chr3R_21010001 RAL-805 1551 chr3R 21141672 21141700 chr3R 21150153 21150165 Tirant 5 8474 2.5 3.5 3.0 1.2 8493 chr3R 21141672 intron SNF4Agamma + chr3R 21145918 intron SNF4Agamma + chr3R 21150165 intron SNF4Agamma + chr3R_5_21145001 chr3R_21145001 RAL-805 1552 chr3R 21154549 21154586 chr3R 21154754 21154800 4 212 4.0 0.0 2.0 1.3 251 chr3R 21154549 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154800 intron SNF4Agamma + chr3R_4_21150001 chr3R_21150001 RAL-805 1553 chr3R 21163254 21163273 chr3R 21163329 21163351 8 77 4.5 3.0 3.8 1.7 97 chr3R 21163254 intron SNF4Agamma + chr3R 21163302 intron SNF4Agamma + chr3R 21163351 intron SNF4Agamma + chr3R_8_21160001 chr3R_21160001 RAL-805 1554 chr3R 21330868 21330901 chr3R 21330959 21330991 19 89 5.5 0.5 3.0 4.8 123 chr3R 21330868 intron CG16791 - chr3R 21330930 intron CG16791 - chr3R 21330991 intron CG16791 - chr3R_19_21330001 chr3R_21330001 RAL-805 1555 chr3R 21385702 21385962 chr3R 21385779 21386039 14 74 0.5 0.0 0.2 11.7 337 chr3R 21385702 intergenic not near genes chr3R 21385870 intergenic not near genes chr3R 21386039 intergenic not near genes chr3R_14_21385001 chr3R_21385001 RAL-805 1556 chr3R 21472016 21472035 chr3R 21472096 21472116 7 80 2.0 3.5 2.8 1.8 100 chr3R 21472016 intergenic not near genes chr3R 21472066 intergenic not near genes chr3R 21472116 intergenic not near genes chr3R_7_21470001 chr3R_21470001 RAL-805 1557 chr3R 21518252 21518266 chr3R 21518336 21518350 6 84 0.0 1.5 0.8 3.3 98 chr3R 21518252 intergenic not near genes chr3R 21518301 intergenic not near genes chr3R 21518350 intergenic not near genes chr3R_6_21515001 chr3R_21515001 RAL-805 1558 chr3R 21520005 21520134 chr3R 21520106 21520220 4 96 3.0 3.0 3.0 1.0 215 chr3R 21520005 intergenic not near genes chr3R 21520112 intergenic not near genes chr3R 21520220 intergenic not near genes chr3R_4_21520001 chr3R_21520001 RAL-805 1559 chr3R 21600257 21600278 chr3R 21600335 21600356 4 78 0.0 4.5 2.2 1.2 99 chr3R 21600257 intron InR - chr3R 21600306 intron InR - chr3R 21600356 intron InR - chr3R_4_21600001 chr3R_21600001 RAL-805 1560 chr3R 21609007 21609037 chr3R 21611640 21611671 NOF 7 2631 3.5 2.0 2.8 1.8 2664 chr3R 21609007 intron InR - chr3R 21610339 intron InR - chr3R 21611671 intron InR - chr3R_7_21610001 chr3R_21610001 RAL-805 1561 chr3R 21761123 21761154 chr3R 21768512 21768527 mdg1 12 7388 3.0 3.0 3.0 3.0 7404 chr3R 21761123 exon CG42335 + chr3R 21764825 intron CG42335 + chr3R 21768527 exon CG42335 + chr3R_12_21760001 chr3R_21760001 RAL-805 1562 chr3R 21784861 21784886 chr3R 21784959 21784984 8 97 2.5 0.0 1.2 3.6 123 chr3R 21784861 3` UTR,3` UTR CASK -,CRG - chr3R 21784922 3` UTR,3` UTR CASK -,CRG - chr3R 21784984 3` UTR,3` UTR CASK -,CRG - chr3R_8_21780001 chr3R_21780001 RAL-805 1563 chr3R 8339246 8339246 chr3R 21907534 21907534 4 13568288 13.0 16.0 14.5 0.3 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-805 1564 chr3R 21907534 21907534 chr3R 28831801 28831802 13 6924268 20.0 16.0 18.0 0.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_13_25365001 chr3R_25365001 RAL-805 1565 chr3R 8339246 8339247 chr3R 21907535 21907535 4 13568288 13.0 16.5 14.8 0.3 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-805 1566 chr3R 21907535 21907535 chr3R 28831801 28831802 22 6924266 20.0 16.0 18.0 1.2 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_22_25365001 chr3R_25365001 RAL-805 1567 chr3R 8339244 8339247 chr3R 21907536 21907536 4 13568290 13.0 17.0 15.0 0.2 13568292 chr3R 8339244 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-805 1568 chr3R 21907536 21907536 chr3R 28831801 28831802 28 6924266 20.5 16.0 18.2 1.5 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_28_25365001 chr3R_25365001 RAL-805 1569 chr3R 21918997 21919016 chr3R 21919077 21919096 7 80 0.0 2.5 1.2 3.2 99 chr3R 21918997 intergenic not near genes chr3R 21919046 intergenic not near genes chr3R 21919096 intergenic not near genes chr3R_7_21915001 chr3R_21915001 RAL-805 1570 chr3R 22108353 22108385 chr3R 22108584 22108616 7 230 3.5 2.5 3.0 1.8 263 chr3R 22108353 intron CG5778 - chr3R 22108484 intron CG5778 - chr3R 22108616 intron CG5778 - chr3R_7_22105001 chr3R_22105001 RAL-805 1571 chr3R 22143438 22143466 chr3R 22144011 22144013 6 565 2.5 1.0 1.8 2.1 575 chr3R 22143438 intron SKIP + chr3R 22143726 intron SKIP + chr3R 22144013 intron SKIP + chr3R_6_22140001 chr3R_22140001 RAL-805 1572 chr3R 22192356 22192371 chr3R 22192630 22192630 7 271 0.0 0.5 0.2 5.8 274 chr3R 22192356 intron SKIP + chr3R 22192493 intron SKIP + chr3R 22192630 intron SKIP + chr3R_7_22190001 chr3R_22190001 RAL-805 1573 chr3R 22198129 22198143 chr3R 22198204 22198208 7 74 8.5 2.5 5.5 1.1 79 chr3R 22198129 intron,intron SKIP +,CR45224 - chr3R 22198168 intron,intron SKIP +,CR45224 - chr3R 22198208 intron,intron SKIP +,CR45224 - chr3R_7_22195001 chr3R_22195001 RAL-805 1574 chr3R 22198153 22198160 chr3R 22198203 22198230 5 68 4.0 2.5 3.2 1.2 77 chr3R 22198153 intron,intron SKIP +,CR45224 - chr3R 22198192 intron,intron SKIP +,CR45224 - chr3R 22198230 intron,intron SKIP +,CR45224 - chr3R_5_22195001 chr3R_22195001 RAL-805 1575 chr3R 22234682 22234715 chr3R 22236001 22236034 pogo 5 1319 1.0 2.0 1.5 2.0 1352 chr3R 22234682 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236034 intron SKIP + chr3R_5_22235001 chr3R_22235001 RAL-805 1576 chr3R 22370406 22370422 chr3R 22370495 22370511 4 89 3.0 3.0 3.0 1.0 105 chr3R 22370406 intron PyK + chr3R 22370458 intron PyK + chr3R 22370511 intron PyK + chr3R_4_22370001 chr3R_22370001 RAL-805 1577 chr3R 22428580 22428602 chr3R 22428656 22428678 9 75 5.0 5.0 5.0 1.5 98 chr3R 22428580 intron CG13847 - chr3R 22428629 intron CG13847 - chr3R 22428678 intron CG13847 - chr3R_9_22425001 chr3R_22425001 RAL-805 1578 chr3R 22433092 22433110 chr3R 22433192 22433210 6 99 6.0 6.0 6.0 0.9 118 chr3R 22433092 intron CG13847 - chr3R 22433151 intron CG13847 - chr3R 22433210 intron CG13847 - chr3R_6_22430001 chr3R_22430001 RAL-805 1579 chr3R 22450542 22450579 chr3R 22453182 22453219 NOF 12 2639 3.0 4.0 3.5 2.7 2677 chr3R 22450542 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453219 intron CG34376 + chr3R_12_22450001 chr3R_22450001 RAL-805 1580 chr3R 22507803 22507811 chr3R 22507878 22507895 4 81 4.5 4.0 4.2 0.8 92 chr3R 22507803 intron Octbeta1R + chr3R 22507849 intron Octbeta1R + chr3R 22507895 intron Octbeta1R + chr3R_4_22505001 chr3R_22505001 RAL-805 1581 chr3R 22673723 22673730 chr3R 22673818 22673825 4 94 2.5 5.0 3.8 0.8 102 chr3R 22673723 intron wake + chr3R 22673774 intron wake + chr3R 22673825 intron wake + chr3R_4_22670001 chr3R_22670001 RAL-805 1582 chr3R 22741440 22741471 chr3R 22741522 22741539 8 78 1.5 5.5 3.5 1.8 99 chr3R 22741440 exon CG6985 + chr3R 22741490 exon CG6985 + chr3R 22741539 exon CG6985 + chr3R_8_22740001 chr3R_22740001 RAL-805 1583 chr3R 22794511 22794541 chr3R 22794588 22794616 11 77 3.0 4.5 3.8 2.3 105 chr3R 22794511 intergenic CG7029 + chr3R 22794564 intergenic not near genes chr3R 22794616 intergenic not near genes chr3R_11_22790001 chr3R_22790001 RAL-805 1584 chr3R 22797760 22797935 chr3R 22797845 22798031 14 93 0.0 0.0 0.0 14.0 271 chr3R 22797760 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798031 intergenic not near genes chr3R_14_22795001 chr3R_22795001 RAL-805 1585 chr3R 22860153 22860168 chr3R 22860245 22860260 6 92 4.0 3.0 3.5 1.3 107 chr3R 22860153 intergenic not near genes chr3R 22860206 intergenic not near genes chr3R 22860260 intergenic not near genes chr3R_6_22860001 chr3R_22860001 RAL-805 1586 chr3R 22889019 22889045 chr3R 22889096 22889122 8 76 6.0 1.5 3.8 1.7 103 chr3R 22889019 intergenic not near genes chr3R 22889070 intergenic not near genes chr3R 22889122 intergenic not near genes chr3R_8_22885001 chr3R_22885001 RAL-805 1587 chr3R 22919168 22919186 chr3R 22919264 22919283 7 95 1.5 8.0 4.8 1.2 115 chr3R 22919168 intron klg + chr3R 22919226 intron klg + chr3R 22919283 intron klg + chr3R_7_22915001 chr3R_22915001 RAL-805 1588 chr3R 22927870 22927900 chr3R 22927965 22927988 7 93 3.0 2.5 2.8 1.8 118 chr3R 22927870 intron klg + chr3R 22927929 intron klg + chr3R 22927988 intron klg + chr3R_7_22925001 chr3R_22925001 RAL-805 1589 chr3R 22934621 22934628 chr3R 22934703 22934709 4 80 5.0 6.5 5.8 0.6 88 chr3R 22934621 intron klg + chr3R 22934665 intron klg + chr3R 22934709 intron klg + chr3R_4_22930001 chr3R_22930001 RAL-805 1590 chr3R 22949507 22949520 chr3R 22950717 22950730 4 1210 6.5 3.0 4.8 0.7 1223 chr3R 22949507 intron klg + chr3R 22950118 intron klg + chr3R 22950730 intron klg + chr3R_4_22950001 chr3R_22950001 RAL-805 1591 chr3R 22968664 22968691 chr3R 22968767 22968794 15 102 3.0 5.0 4.0 3.0 130 chr3R 22968664 intergenic not near genes chr3R 22968729 intergenic not near genes chr3R 22968794 intergenic not near genes chr3R_15_22965001 chr3R_22965001 RAL-805 1592 chr3R 23145171 23145194 chr3R 23145248 23145268 4 76 1.5 3.0 2.2 1.2 97 chr3R 23145171 intergenic not near genes chr3R 23145220 intergenic not near genes chr3R 23145268 intergenic not near genes chr3R_4_23145001 chr3R_23145001 RAL-805 1593 chr3R 23197961 23197982 chr3R 23198040 23198061 7 79 1.5 0.5 1.0 3.5 100 chr3R 23197961 exon cnc - chr3R 23198011 intron cnc - chr3R 23198061 intron cnc - chr3R_7_23195001 chr3R_23195001 RAL-805 1594 chr3R 23291248 23291281 chr3R 23291333 23291367 11 84 5.5 2.5 4.0 2.2 119 chr3R 23291248 3` UTR pnt - chr3R 23291308 3` UTR pnt - chr3R 23291367 exon pnt - chr3R_11_23290001 chr3R_23290001 RAL-805 1595 chr3R 23335432 23335465 chr3R 23335510 23335542 10 78 3.5 3.5 3.5 2.2 110 chr3R 23335432 intron pnt - chr3R 23335487 intron pnt - chr3R 23335542 intron pnt - chr3R_10_23335001 chr3R_23335001 RAL-805 1596 chr3R 23421915 23422001 chr3R 23421992 23422086 4 77 0.0 0.0 0.0 4.0 171 chr3R 23421915 intron CG4374 - chr3R 23422000 intron CG4374 - chr3R 23422086 intron CG4374 - chr3R_4_23420001 chr3R_23420001 RAL-805 1597 chr3R 23528256 23528282 chr3R 23528345 23528371 4 89 1.5 2.5 2.0 1.3 115 chr3R 23528256 intron CG10175 - chr3R 23528314 intron CG10175 - chr3R 23528371 intron CG10175 - chr3R_4_23525001 chr3R_23525001 RAL-805 1598 chr3R 23536950 23536980 chr3R 23537131 23537161 4 182 1.0 3.0 2.0 1.3 211 chr3R 23536950 intergenic CG10168 -,CG16732 - chr3R 23537056 exon CG10168 - chr3R 23537161 exon CG10168 - chr3R_4_23535001 chr3R_23535001 RAL-805 1599 chr3R 23558399 23558429 chr3R 23560180 23560210 Bari1 9 1781 2.5 1.5 2.0 3.0 1811 chr3R 23558399 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560210 intron beat-IV + chr3R_9_23555001 chr3R_23555001 RAL-805 1600 chr3R 23564444 23564473 chr3R 23564588 23564617 7 144 2.0 3.0 2.5 2.0 173 chr3R 23564444 intron beat-IV + chr3R 23564530 intron beat-IV + chr3R 23564617 intron beat-IV + chr3R_7_23560001 chr3R_23560001 RAL-805 1601 chr3R 23584850 23584855 chr3R 23585442 23585447 4 592 2.5 6.5 4.5 0.7 597 chr3R 23584850 intergenic not near genes chr3R 23585148 intergenic not near genes chr3R 23585447 intergenic not near genes chr3R_4_23585001 chr3R_23585001 RAL-805 1602 chr3R 23589883 23589909 chr3R 23590292 23590318 4 409 3.0 3.0 3.0 1.0 435 chr3R 23589883 intergenic CG10182 -,CG33337 - chr3R 23590100 intergenic CG33337 -,CG10182 - chr3R 23590318 exon CG33337 - chr3R_4_23590001 chr3R_23590001 RAL-805 1603 chr3R 23684709 23684726 chr3R 23685186 23685197 roo 4 479 2.5 6.0 4.2 0.8 488 chr3R 23684709 intron CG18754 + chr3R 23684953 intron CG18754 + chr3R 23685197 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-805 1604 chr3R 23733128 23733152 chr3R 23733243 23733267 9 115 1.0 4.5 2.8 2.4 139 chr3R 23733128 intron Rpn9 - chr3R 23733198 intron Rpn9 - chr3R 23733267 5` UTR Rpn9 - chr3R_9_23730001 chr3R_23730001 RAL-805 1605 chr3R 23835403 23835436 chr3R 23844553 23844586 roo 8 9150 1.5 3.0 2.2 2.5 9183 chr3R 23835403 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844586 intron CG34355 + chr3R_8_23835001 chr3R_23835001 RAL-805 1606 chr3R 23865029 23865062 chr3R 23865118 23865150 11 86 0.5 2.5 1.5 4.4 121 chr3R 23865029 intron Pli - chr3R 23865090 intron Pli - chr3R 23865150 intron Pli - chr3R_11_23865001 chr3R_23865001 RAL-805 1607 chr3R 23888082 23888099 chr3R 23888168 23888185 5 85 3.0 0.5 1.8 1.8 103 chr3R 23888082 intron Pli - chr3R 23888134 intron Pli - chr3R 23888185 intron Pli - chr3R_5_23885001 chr3R_23885001 RAL-805 1608 chr3R 23944912 23944934 chr3R 23944997 23945019 9 84 2.0 3.5 2.8 2.4 107 chr3R 23944912 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945019 exon CG12268 - chr3R_9_23940001 chr3R_23940001 RAL-805 1609 chr3R 23949040 23949074 chr3R 23949117 23949151 4 77 2.5 1.0 1.8 1.4 111 chr3R 23949040 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949151 intergenic not near genes chr3R_4_23945001 chr3R_23945001 RAL-805 1610 chr3R 23970709 23970738 chr3R 23970792 23970821 14 83 6.0 5.5 5.8 2.1 112 chr3R 23970709 intron CG31140 + chr3R 23970765 intron CG31140 + chr3R 23970821 intron CG31140 + chr3R_14_23970001 chr3R_23970001 RAL-805 1611 chr3R 24072090 24072115 chr3R 24072528 24072552 jockey 8 437 5.0 5.5 5.2 1.3 462 chr3R 24072090 intron 4EHP - chr3R 24072321 intron 4EHP - chr3R 24072552 intron 4EHP - chr3R_8_24070001 chr3R_24070001 RAL-805 1612 chr3R 24076914 24076947 chr3R 24078381 24078413 hobo 12 1467 4.5 1.5 3.0 3.0 1499 chr3R 24076914 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078413 intron 4EHP - chr3R_12_24075001 chr3R_24075001 RAL-805 1613 chr3R 24100460 24100482 chr3R 24100555 24100577 5 95 0.0 0.5 0.2 4.2 117 chr3R 24100460 intron 4EHP - chr3R 24100518 intron 4EHP - chr3R 24100577 intron 4EHP - chr3R_5_24100001 chr3R_24100001 RAL-805 1614 chr3R 24154961 24154989 chr3R 24155045 24155070 6 84 1.5 1.5 1.5 2.4 109 chr3R 24154961 3` UTR Myo95E - chr3R 24155016 3` UTR Myo95E - chr3R 24155070 3` UTR Myo95E - chr3R_6_24155001 chr3R_24155001 RAL-805 1615 chr3R 24207215 24207246 chr3R 24212291 24212322 flea 7 5076 5.5 5.0 5.2 1.1 5107 chr3R 24207215 intron twin - chr3R 24209768 intron twin - chr3R 24212322 intron twin - chr3R_7_24205001 chr3R_24205001 RAL-805 1616 chr3R 21907534 21907535 chr3R 24389465 24389465 4 2481930 20.0 10.0 15.0 0.2 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_4_23145001 chr3R_23145001 RAL-805 1617 chr3R 24434241 24434264 chr3R 24434319 24434342 5 78 4.5 2.0 3.2 1.2 101 chr3R 24434241 intron nAChRalpha1 - chr3R 24434292 intron nAChRalpha1 - chr3R 24434342 intron nAChRalpha1 - chr3R_5_24430001 chr3R_24430001 RAL-805 1618 chr3R 24436434 24436457 chr3R 24436573 24436593 10 139 4.5 3.5 4.0 2.0 159 chr3R 24436434 intron nAChRalpha1 - chr3R 24436514 intron nAChRalpha1 - chr3R 24436593 intron nAChRalpha1 - chr3R_10_24435001 chr3R_24435001 RAL-805 1619 chr3R 24447723 24447752 chr3R 24447809 24447839 4 87 0.0 0.0 0.0 4.0 116 chr3R 24447723 intron nAChRalpha1 - chr3R 24447781 intron nAChRalpha1 - chr3R 24447839 intron nAChRalpha1 - chr3R_4_24445001 chr3R_24445001 RAL-805 1620 chr3R 24493280 24493301 chr3R 24493509 24493530 BS 12 228 3.0 6.0 4.5 2.2 250 chr3R 24493280 intergenic not near genes chr3R 24493405 intergenic not near genes chr3R 24493530 intergenic not near genes chr3R_12_24490001 chr3R_24490001 RAL-805 1621 chr3R 24495301 24495320 chr3R 24495375 24495396 11 78 7.0 5.0 6.0 1.6 95 chr3R 24495301 intergenic not near genes chr3R 24495348 intergenic not near genes chr3R 24495396 intergenic not near genes chr3R_11_24495001 chr3R_24495001 RAL-805 1622 chr3R 24527806 24527835 chr3R 24527897 24527926 9 91 2.5 2.5 2.5 2.6 120 chr3R 24527806 intergenic CG6607 +,CG13618 + chr3R 24527866 intergenic CG6607 +,CG13618 + chr3R 24527926 intergenic CG6607 +,CG13618 + chr3R_9_24525001 chr3R_24525001 RAL-805 1623 chr3R 24665387 24665414 chr3R 24665564 24665591 9 174 1.0 1.5 1.2 4.1 204 chr3R 24665387 5` UTR slo + chr3R 24665489 intron slo + chr3R 24665591 intron slo + chr3R_9_24665001 chr3R_24665001 RAL-805 1624 chr3R 24667610 24667628 chr3R 24667687 24667705 4 77 1.0 0.0 0.5 2.7 95 chr3R 24667610 intron slo + chr3R 24667658 intron slo + chr3R 24667705 intron slo + chr3R_4_24665001 chr3R_24665001 RAL-805 1625 chr3R 24730105 24730122 chr3R 24732466 24732487 Doc 7 2361 4.0 0.0 2.0 2.3 2382 chr3R 24730105 intron tok + chr3R 24731296 intron tok + chr3R 24732487 intron tok + chr3R_7_24730001 chr3R_24730001 RAL-805 1626 chr3R 24925121 24925149 chr3R 24925211 24925239 11 87 5.0 2.0 3.5 2.4 118 chr3R 24925121 3` UTR Mink + chr3R 24925180 intergenic Mink +,Trf4-2 + chr3R 24925239 5` UTR Trf4-2 + chr3R_11_24925001 chr3R_24925001 RAL-805 1627 chr3R 24927137 24927156 chr3R 24931927 24931944 Doc 4 4790 1.0 3.5 2.2 1.2 4807 chr3R 24927137 intergenic Trf4-2 + chr3R 24929540 intergenic not near genes chr3R 24931944 intergenic CG11771 + chr3R_4_24925001 chr3R_24925001 RAL-805 1628 chr3R 24958938 24958972 chr3R 24959017 24959051 7 79 2.5 2.0 2.2 2.2 113 chr3R 24958938 intergenic not near genes chr3R 24958994 intergenic not near genes chr3R 24959051 intergenic not near genes chr3R_7_24955001 chr3R_24955001 RAL-805 1629 chr3R 24974912 24974931 chr3R 24974991 24975010 10 79 3.5 2.5 3.0 2.5 98 chr3R 24974912 intergenic not near genes chr3R 24974961 intergenic not near genes chr3R 24975010 intergenic not near genes chr3R_10_24970001 chr3R_24970001 RAL-805 1630 chr3R 25004901 25004922 chr3R 25004984 25005005 9 83 0.0 4.5 2.2 2.8 104 chr3R 25004901 intron tnc + chr3R 25004953 intron tnc + chr3R 25005005 intron tnc + chr3R_9_25000001 chr3R_25000001 RAL-805 1631 chr3R 25027537 25027570 chr3R 25027750 25027784 13 212 3.5 6.5 5.0 2.2 247 chr3R 25027537 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027784 intron Hr96 + chr3R_13_25025001 chr3R_25025001 RAL-805 1632 chr3R 25159512 25159537 chr3R 25159600 25159624 11 86 2.0 2.5 2.2 3.4 112 chr3R 25159512 intergenic not near genes chr3R 25159568 intergenic not near genes chr3R 25159624 intergenic not near genes chr3R_11_25155001 chr3R_25155001 RAL-805 1633 chr3R 25188212 25188242 chr3R 25188289 25188319 10 75 4.0 5.5 4.8 1.7 107 chr3R 25188212 intron,intron lobo -,dan + chr3R 25188266 intron,intron lobo -,dan + chr3R 25188319 intron,intron lobo -,dan + chr3R_10_25185001 chr3R_25185001 RAL-805 1634 chr3R 25208892 25208928 chr3R 25208969 25209007 8 78 3.0 1.5 2.2 2.5 115 chr3R 25208892 intron CG13654 + chr3R 25208950 intron CG13654 + chr3R 25209007 intron CG13654 + chr3R_8_25205001 chr3R_25205001 RAL-805 1635 chr3R 25235700 25235728 chr3R 25235790 25235818 5 90 2.5 1.5 2.0 1.7 118 chr3R 25235700 intergenic CG10420 - chr3R 25235759 intergenic CG10420 - chr3R 25235818 intergenic CG10420 - chr3R_5_25235001 chr3R_25235001 RAL-805 1636 chr3R 25368476 25368503 chr3R 25368594 25368620 4 118 2.5 0.0 1.2 1.8 144 chr3R 25368476 intron Fur1 - chr3R 25368548 intron Fur1 - chr3R 25368620 intron Fur1 - chr3R_4_25365001 chr3R_25365001 RAL-805 1637 chr3R 25422061 25422098 chr3R 25422142 25422179 8 81 3.0 0.0 1.5 3.2 118 chr3R 25422061 intron Fur1 - chr3R 25422120 intron Fur1 - chr3R 25422179 intron Fur1 - chr3R_8_25420001 chr3R_25420001 RAL-805 1638 chr3R 25486125 25486154 chr3R 25486322 25486336 10 193 3.0 2.5 2.8 2.6 211 chr3R 25486125 3` UTR Dhap-at - chr3R 25486230 3` UTR Dhap-at - chr3R 25486336 3` UTR Dhap-at - chr3R_10_25485001 chr3R_25485001 RAL-805 1639 chr3R 25496081 25496106 chr3R 25496166 25496191 12 84 1.0 2.5 1.8 4.3 110 chr3R 25496081 3` UTR CR44948 - chr3R 25496136 3` UTR CR44948 - chr3R 25496191 3` UTR CR44948 - chr3R_12_25495001 chr3R_25495001 RAL-805 1640 chr3R 25533418 25533437 chr3R 25533498 25533519 5 82 0.5 1.5 1.0 2.5 101 chr3R 25533418 intron msi + chr3R 25533468 intron msi + chr3R 25533519 intron msi + chr3R_5_25530001 chr3R_25530001 RAL-805 1641 chr3R 25544852 25544879 chr3R 25544949 25544976 5 97 1.0 0.5 0.8 2.8 124 chr3R 25544852 intron msi + chr3R 25544914 intron msi + chr3R 25544976 intron msi + chr3R_5_25540001 chr3R_25540001 RAL-805 1642 chr3R 25576842 25576863 chr3R 25576937 25576962 12 98 4.0 0.5 2.2 3.8 120 chr3R 25576842 intron msi + chr3R 25576902 intron msi + chr3R 25576962 intron msi + chr3R_12_25575001 chr3R_25575001 RAL-805 1643 chr3R 25637175 25637207 chr3R 25637488 25637520 7 313 0.5 1.5 1.0 3.5 345 chr3R 25637175 intergenic not near genes chr3R 25637348 intergenic jigr1 + chr3R 25637520 intergenic jigr1 + chr3R_7_25635001 chr3R_25635001 RAL-805 1644 chr3R 25689126 25689154 chr3R 25689234 25689262 8 108 5.0 2.0 3.5 1.8 136 chr3R 25689126 intergenic not near genes chr3R 25689194 intergenic not near genes chr3R 25689262 intergenic not near genes chr3R_8_25685001 chr3R_25685001 RAL-805 1645 chr3R 25743973 25743992 chr3R 25744154 25744173 7 181 3.5 2.5 3.0 1.8 200 chr3R 25743973 intron LpR1 - chr3R 25744073 intron LpR1 - chr3R 25744173 intron LpR1 - chr3R_7_25740001 chr3R_25740001 RAL-805 1646 chr3R 25796384 25796399 chr3R 25796463 25796478 8 77 7.5 0.0 3.8 1.7 94 chr3R 25796384 intergenic CR43847 - chr3R 25796431 intergenic CR43847 - chr3R 25796478 intergenic CR43847 - chr3R_8_25795001 chr3R_25795001 RAL-805 1647 chr3R 25832700 25832724 chr3R 25841874 25841902 roo 7 9180 2.0 2.5 2.2 2.2 9202 chr3R 25832700 exon alpha4GT2 + chr3R 25837301 intron alpha4GT2 + chr3R 25841902 exon alpha4GT2 + chr3R_7_25835001 chr3R_25835001 RAL-805 1648 chr3R 25861827 25861846 chr3R 25861904 25861923 5 77 2.0 1.5 1.8 1.8 96 chr3R 25861827 intron CG5890 + chr3R 25861875 intron CG5890 + chr3R 25861923 intron CG5890 + chr3R_5_25860001 chr3R_25860001 RAL-805 1649 chr3R 25884456 25884489 chr3R 25887394 25887427 11 2937 10.5 8.5 9.5 1.0 2971 chr3R 25884456 intron SppL + chr3R 25885942 exon SppL + chr3R 25887427 3` UTR SppL + chr3R_11_25885001 chr3R_25885001 RAL-805 1650 chr3R 25900877 25900912 chr3R 25903595 25903629 14 2718 23.0 32.5 27.8 0.5 2752 chr3R 25900877 exon CG31091 + chr3R 25902253 intergenic CG31091 +,CG31089 + chr3R 25903629 exon,intron CG31089 +,CR43259 - chr3R_14_25900001 chr3R_25900001 RAL-805 1651 chr3R 25909857 25909882 chr3R 25909948 25909973 11 91 1.0 5.0 3.0 2.8 116 chr3R 25909857 intron CG42235 + chr3R 25909915 intron CG42235 + chr3R 25909973 intron CG42235 + chr3R_11_25905001 chr3R_25905001 RAL-805 1652 chr3R 25927511 25927535 chr3R 25927593 25927617 4 82 2.5 0.0 1.2 1.8 106 chr3R 25927511 intron CCAP-R - chr3R 25927564 intron CCAP-R - chr3R 25927617 intron CCAP-R - chr3R_4_25925001 chr3R_25925001 RAL-805 1653 chr3R 25932749 25932751 chr3R 25933141 25933143 4 392 2.5 3.0 2.8 1.1 394 chr3R 25932749 intron CCAP-R - chr3R 25932946 intron CCAP-R - chr3R 25933143 intron CCAP-R - chr3R_4_25930001 chr3R_25930001 RAL-805 1654 chr3R 26015701 26015734 chr3R 26015788 26015821 11 87 5.5 2.0 3.8 2.3 120 chr3R 26015701 3` UTR,5` UTR Kaz-m1 +,CR45040 + chr3R 26015761 3` UTR,5` UTR Kaz-m1 +,CR45040 + chr3R 26015821 3` UTR,5` UTR Kaz-m1 +,CR45040 + chr3R_11_26015001 chr3R_26015001 RAL-805 1655 chr3R 26025643 26025670 chr3R 26025725 26025752 11 80 4.0 2.5 3.2 2.6 109 chr3R 26025643 intergenic not near genes chr3R 26025698 intergenic not near genes chr3R 26025752 intergenic not near genes chr3R_11_26025001 chr3R_26025001 RAL-805 1656 chr3R 26093844 26093867 chr3R 26093922 26093945 5 78 1.0 2.0 1.5 2.0 101 chr3R 26093844 intron dys - chr3R 26093894 intron dys - chr3R 26093945 intron dys - chr3R_5_26090001 chr3R_26090001 RAL-805 1657 chr3R 26108826 26108858 chr3R 26117407 26117418 Tirant 9 8571 0.5 0.0 0.2 7.5 8592 chr3R 26108826 5` UTR CG31324 + chr3R 26113122 intron CG31324 + chr3R 26117418 intron CG31324 + chr3R_9_26110001 chr3R_26110001 RAL-805 1658 chr3R 26121953 26121977 chr3R 26122050 26122074 11 97 0.0 4.5 2.2 3.4 121 chr3R 26121953 intron CG31324 + chr3R 26122014 intron CG31324 + chr3R 26122074 intron CG31324 + chr3R_11_26120001 chr3R_26120001 RAL-805 1659 chr3R 26126271 26126287 chr3R 26126376 26126391 5 103 3.0 3.5 3.2 1.2 120 chr3R 26126271 intron CG31324 + chr3R 26126331 intron CG31324 + chr3R 26126391 intron CG31324 + chr3R_5_26125001 chr3R_26125001 RAL-805 1660 chr3R 26235490 26235520 chr3R 26235569 26235602 19 77 0.5 4.0 2.2 5.9 112 chr3R 26235490 5` UTR CR42745 + chr3R 26235546 5` UTR CR42745 + chr3R 26235602 5` UTR CR42745 + chr3R_19_26235001 chr3R_26235001 RAL-805 1661 chr3R 26265822 26265847 chr3R 26265910 26265935 14 88 3.5 7.5 5.5 2.2 113 chr3R 26265822 intron CG6154 + chr3R 26265878 intron CG6154 + chr3R 26265935 intron CG6154 + chr3R_14_26265001 chr3R_26265001 RAL-805 1662 chr3R 26292115 26292133 chr3R 26292195 26292213 5 80 3.5 3.5 3.5 1.1 98 chr3R 26292115 intergenic not near genes chr3R 26292164 intergenic not near genes chr3R 26292213 intergenic not near genes chr3R_5_26290001 chr3R_26290001 RAL-805 1663 chr3R 26318243 26318252 chr3R 26328475 26328484 4 10234 16.0 25.5 20.8 0.2 10241 chr3R 26318243 intergenic CG33970 + chr3R 26323364 intron CG33970 + chr3R 26328484 intron CG33970 + chr3R_4_26320001 chr3R_26320001 RAL-805 1664 chr3R 26318236 26318257 chr3R 26328486 26328497 4 10248 17.5 25.0 21.2 0.2 10261 chr3R 26318236 intergenic CG33970 + chr3R 26323366 intron CG33970 + chr3R 26328497 intron CG33970 + chr3R_4_26320001 chr3R_26320001 RAL-805 1665 chr3R 26334573 26334605 chr3R 26334698 26334729 21 124 1.5 2.5 2.0 7.0 156 chr3R 26334573 intron CG33970 + chr3R 26334651 intron CG33970 + chr3R 26334729 intron CG33970 + chr3R_21_26330001 chr3R_26330001 RAL-805 1666 chr3R 26510249 26510284 chr3R 26510361 26510372 10 105 2.0 3.5 2.8 2.6 123 chr3R 26510249 intron plum - chr3R 26510310 intron plum - chr3R 26510372 intron plum - chr3R_10_26510001 chr3R_26510001 RAL-805 1667 chr3R 26529351 26529378 chr3R 26529431 26529461 11 82 3.0 1.0 2.0 3.7 110 chr3R 26529351 intron plum - chr3R 26529406 intron plum - chr3R 26529461 intron plum - chr3R_11_26525001 chr3R_26525001 RAL-805 1668 chr3R 26546010 26546021 chr3R 26546192 26546201 7 182 0.0 4.5 2.2 2.2 191 chr3R 26546010 intron scrib + chr3R 26546106 intron scrib + chr3R 26546201 intron scrib + chr3R_7_26545001 chr3R_26545001 RAL-805 1669 chr3R 26575015 26575039 chr3R 26575087 26575118 8 77 1.0 0.5 0.8 4.4 103 chr3R 26575015 exon scrib + chr3R 26575066 intron scrib + chr3R 26575118 intron scrib + chr3R_8_26575001 chr3R_26575001 RAL-805 1670 chr3R 26642729 26642759 chr3R 26643122 26643151 jockey 10 391 6.0 5.0 5.5 1.5 422 chr3R 26642729 intergenic not near genes chr3R 26642940 intergenic not near genes chr3R 26643151 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-805 1671 chr3R 26652272 26652302 chr3R 26652359 26652389 11 86 1.5 2.5 2.0 3.7 117 chr3R 26652272 intron beat-VII - chr3R 26652330 intron beat-VII - chr3R 26652389 intron beat-VII - chr3R_11_26650001 chr3R_26650001 RAL-805 1672 chr3R 26660435 26660449 chr3R 26660518 26660532 6 81 3.5 4.5 4.0 1.2 97 chr3R 26660435 intron beat-VII - chr3R 26660484 intron beat-VII - chr3R 26660532 intron beat-VII - chr3R_6_26660001 chr3R_26660001 RAL-805 1673 chr3R 26660452 26660464 chr3R 26660513 26660523 8 76 0.5 4.0 2.2 2.5 71 chr3R 26660452 intron beat-VII - chr3R 26660488 intron beat-VII - chr3R 26660523 intron beat-VII - chr3R_8_26660001 chr3R_26660001 RAL-805 1674 chr3R 26710834 26710853 chr3R 26710915 26710937 5 83 5.5 3.5 4.5 0.9 103 chr3R 26710834 intron amon - chr3R 26710886 intron amon - chr3R 26710937 intron amon - chr3R_5_26710001 chr3R_26710001 RAL-805 1675 chr3R 26715664 26715686 chr3R 26715751 26715776 5 90 2.5 5.5 4.0 1.0 112 chr3R 26715664 3` UTR CG6425 - chr3R 26715720 3` UTR CG6425 - chr3R 26715776 3` UTR CG6425 - chr3R_5_26715001 chr3R_26715001 RAL-805 1676 chr3R 26762043 26762061 chr3R 26762680 26762698 5 635 2.5 1.5 2.0 1.7 655 chr3R 26762043 intergenic not near genes chr3R 26762370 intergenic not near genes chr3R 26762698 intergenic not near genes chr3R_5_26760001 chr3R_26760001 RAL-805 1677 chr3R 26764167 26764178 chr3R 26764241 26764267 5 81 1.0 2.0 1.5 2.0 100 chr3R 26764167 intergenic not near genes chr3R 26764217 intergenic not near genes chr3R 26764267 intergenic not near genes chr3R_5_26760001 chr3R_26760001 RAL-805 1678 chr3R 26770240 26770265 chr3R 26770317 26770342 7 75 2.5 1.0 1.8 2.5 102 chr3R 26770240 intergenic CR45563 + chr3R 26770291 intergenic CR45563 + chr3R 26770342 intergenic not near genes chr3R_7_26770001 chr3R_26770001 RAL-805 1679 chr3R 26810554 26810571 chr3R 26811039 26811056 roo 6 485 3.0 2.0 2.5 1.7 502 chr3R 26810554 intron Tl + chr3R 26810805 intron Tl + chr3R 26811056 intron Tl + chr3R_6_26810001 chr3R_26810001 RAL-805 1680 chr3R 26852495 26852503 chr3R 26852582 26852590 5 87 0.0 1.5 0.8 2.8 95 chr3R 26852495 intron Lerp - chr3R 26852542 intron Lerp - chr3R 26852590 intron Lerp - chr3R_5_26850001 chr3R_26850001 RAL-805 1681 chr3R 26908256 26908270 chr3R 26908412 26908427 7 154 3.5 4.0 3.8 1.5 171 chr3R 26908256 intron T48 + chr3R 26908342 intron T48 + chr3R 26908427 intron T48 + chr3R_7_26905001 chr3R_26905001 RAL-805 1682 chr3R 26990892 26990919 chr3R 26990970 26991003 11 82 3.5 4.0 3.8 2.3 111 chr3R 26990892 intergenic not near genes chr3R 26990948 intergenic not near genes chr3R 26991003 intergenic not near genes chr3R_11_26990001 chr3R_26990001 RAL-805 1683 chr3R 27007410 27007435 chr3R 27016545 27016569 roo 9 9134 1.0 2.0 1.5 3.6 9159 chr3R 27007410 intron RYa-R + chr3R 27011990 intron RYa-R + chr3R 27016569 intron RYa-R + chr3R_9_27010001 chr3R_27010001 RAL-805 1684 chr3R 27019511 27019538 chr3R 27019606 27019634 19 96 6.0 3.0 4.5 3.5 123 chr3R 27019511 intron,exon RYa-R +,CG17191 - chr3R 27019572 intron,exon RYa-R +,CG17191 - chr3R 27019634 intron,intron RYa-R +,CG17191 - chr3R_19_27015001 chr3R_27015001 RAL-805 1685 chr3R 27027687 27027703 chr3R 27027767 27027785 6 81 0.5 3.0 1.8 2.1 98 chr3R 27027687 intron RYa-R + chr3R 27027736 intron RYa-R + chr3R 27027785 intron RYa-R + chr3R_6_27025001 chr3R_27025001 RAL-805 1686 chr3R 27028729 27028752 chr3R 27028808 27028831 4 79 1.5 3.5 2.5 1.1 102 chr3R 27028729 intron RYa-R + chr3R 27028780 intron RYa-R + chr3R 27028831 intron RYa-R + chr3R_4_27025001 chr3R_27025001 RAL-805 1687 chr3R 27051662 27051693 chr3R 27051753 27051784 5 91 1.5 0.0 0.8 2.8 122 chr3R 27051662 intron RYa-R + chr3R 27051723 intron RYa-R + chr3R 27051784 intron RYa-R + chr3R_5_27050001 chr3R_27050001 RAL-805 1688 chr3R 27140513 27140547 chr3R 27148123 27148157 412 14 7608 7.5 2.5 5.0 2.3 7644 chr3R 27140513 intron CG6051 - chr3R 27144335 intron CG6051 - chr3R 27148157 intron CG6051 - chr3R_14_27140001 chr3R_27140001 RAL-805 1689 chr3R 27300868 27300875 chr3R 27300959 27300967 5 91 3.0 5.0 4.0 1.0 99 chr3R 27300868 intron CG3339 - chr3R 27300918 intron CG3339 - chr3R 27300967 intron CG3339 - chr3R_5_27300001 chr3R_27300001 RAL-805 1690 chr3R 27327431 27327458 chr3R 27327509 27327535 14 78 2.5 3.0 2.8 3.7 104 chr3R 27327431 intergenic not near genes chr3R 27327483 intergenic not near genes chr3R 27327535 intergenic not near genes chr3R_14_27325001 chr3R_27325001 RAL-805 1691 chr3R 27330873 27330888 chr3R 27330959 27330974 6 86 1.0 3.5 2.2 1.9 101 chr3R 27330873 5` UTR CG3330 - chr3R 27330924 intergenic CG3330 - chr3R 27330974 intergenic CG3330 - chr3R_6_27330001 chr3R_27330001 RAL-805 1692 chr3R 27342797 27342824 chr3R 27351378 27351405 Tirant 7 8581 2.5 7.5 5.0 1.2 8608 chr3R 27342797 intron CG42534 + chr3R 27347101 intron CG42534 + chr3R 27351405 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-805 1693 chr3R 27511249 27511283 chr3R 27511336 27511370 22 87 3.5 4.0 3.8 4.6 121 chr3R 27511249 intergenic not near genes chr3R 27511310 intergenic not near genes chr3R 27511370 intergenic not near genes chr3R_22_27510001 chr3R_27510001 RAL-805 1694 chr3R 27521165 27521181 chr3R 27530374 27530390 roo 5 9209 3.0 2.5 2.8 1.3 9225 chr3R 27521165 intron CG12885 + chr3R 27525778 intron CG12885 + chr3R 27530390 intron CG12885 + chr3R_5_27525001 chr3R_27525001 RAL-805 1695 chr3R 27648591 27648870 chr3R 27648670 27648945 11 77 2.5 0.0 1.2 5.0 354 chr3R 27648591 intron tau - chr3R 27648768 intron tau - chr3R 27648945 intron tau - chr3R_11_27645001 chr3R_27645001 RAL-805 1696 chr3R 27685736 27685747 chr3R 27685845 27685856 5 107 0.0 5.5 2.8 1.3 120 chr3R 27685736 3` UTR CG31055 - chr3R 27685796 3` UTR CG31055 - chr3R 27685856 3` UTR CG31055 - chr3R_5_27685001 chr3R_27685001 RAL-805 1697 chr3R 27706783 27706808 chr3R 27706860 27706885 8 76 4.5 2.5 3.5 1.8 102 chr3R 27706783 intergenic CG12428 -,CG12877 + chr3R 27706834 intergenic CG12428 -,CG12877 + chr3R 27706885 intergenic CG12428 -,CG12877 + chr3R_8_27705001 chr3R_27705001 RAL-805 1698 chr3R 27718582 27718600 chr3R 27718660 27718679 8 79 2.5 1.5 2.0 2.7 97 chr3R 27718582 intergenic not near genes chr3R 27718630 intergenic not near genes chr3R 27718679 intergenic not near genes chr3R_8_27715001 chr3R_27715001 RAL-805 1699 chr3R 27725569 27725596 chr3R 27731008 27731038 I-element 7 5442 3.5 1.5 2.5 2.0 5469 chr3R 27725569 intergenic not near genes chr3R 27728304 intergenic not near genes chr3R 27731038 intergenic not near genes chr3R_7_27725001 chr3R_27725001 RAL-805 1700 chr3R 27799937 27799959 chr3R 27800019 27800041 10 82 2.5 2.0 2.2 3.1 104 chr3R 27799937 intron CG34353 - chr3R 27799989 intron CG34353 - chr3R 27800041 intron CG34353 - chr3R_10_27795001 chr3R_27795001 RAL-805 1701 chr3R 27856762 27856780 chr3R 27858245 27858263 hopper2 6 1483 9.5 5.0 7.2 0.7 1501 chr3R 27856762 intron CG34353 - chr3R 27857512 intron CG34353 - chr3R 27858263 intron CG34353 - chr3R_6_27855001 chr3R_27855001 RAL-805 1702 chr3R 27862953 27862981 chr3R 27868258 27868261 Transpac 7 5301 3.5 2.5 3.0 1.8 5308 chr3R 27862953 intron CG34353 - chr3R 27865607 intron CG34353 - chr3R 27868261 intron CG34353 - chr3R_7_27865001 chr3R_27865001 RAL-805 1703 chr3R 27875700 27875728 chr3R 27882755 27882783 297 8 7055 6.0 3.5 4.8 1.4 7083 chr3R 27875700 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882783 intron CG34353 - chr3R_8_27875001 chr3R_27875001 RAL-805 1704 chr3R 28012954 28012974 chr3R 28013171 28013195 7 220 0.0 3.0 1.5 2.8 241 chr3R 28012954 intergenic not near genes chr3R 28013074 intergenic not near genes chr3R 28013195 intergenic not near genes chr3R_7_28010001 chr3R_28010001 RAL-805 1705 chr3R 28035495 28035517 chr3R 28035572 28035594 5 75 1.0 3.5 2.2 1.6 99 chr3R 28035495 intron CG34362 + chr3R 28035544 intron CG34362 + chr3R 28035594 intron CG34362 + chr3R_5_28035001 chr3R_28035001 RAL-805 1706 chr3R 28054441 28054474 chr3R 28054517 28054550 8 75 1.5 3.0 2.2 2.5 109 chr3R 28054441 intron CG34362 + chr3R 28054496 intron CG34362 + chr3R 28054550 intron CG34362 + chr3R_8_28050001 chr3R_28050001 RAL-805 1707 chr3R 28173675 28173700 chr3R 28181105 28181130 mdg1 10 7430 3.0 1.0 2.0 3.3 7455 chr3R 28173675 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181130 intron CG34354 + chr3R_10_28175001 chr3R_28175001 RAL-805 1708 chr3R 28253346 28253373 chr3R 28255856 28255883 jockey 10 2509 2.5 5.5 4.0 2.0 2537 chr3R 28253346 intergenic not near genes chr3R 28254614 intergenic not near genes chr3R 28255883 intergenic not near genes chr3R_10_28250001 chr3R_28250001 RAL-805 1709 chr3R 28302102 28302134 chr3R 28302541 28302573 jockey 6 439 3.0 3.5 3.2 1.4 471 chr3R 28302102 intergenic not near genes chr3R 28302338 intergenic not near genes chr3R 28302573 intergenic not near genes chr3R_6_28300001 chr3R_28300001 RAL-805 1710 chr3R 28352514 28352545 chr3R 28352854 28352885 11 339 1.5 4.0 2.8 2.9 371 chr3R 28352514 exon Or98b + chr3R 28352700 exon Or98b + chr3R 28352885 exon Or98b + chr3R_11_28350001 chr3R_28350001 RAL-805 1711 chr3R 28390111 28390141 chr3R 28390188 28390197 10 72 2.0 2.5 2.2 3.1 86 chr3R 28390111 intergenic not near genes chr3R 28390154 intergenic not near genes chr3R 28390197 intergenic not near genes chr3R_10_28390001 chr3R_28390001 RAL-805 1712 chr3R 28393701 28393716 chr3R 28393800 28393815 7 99 4.0 1.5 2.8 1.8 114 chr3R 28393701 intergenic not near genes chr3R 28393758 intergenic not near genes chr3R 28393815 intergenic not near genes chr3R_7_28390001 chr3R_28390001 RAL-805 1713 chr3R 28410982 28411014 chr3R 28411073 28411106 7 91 2.0 0.5 1.2 3.2 124 chr3R 28410982 intergenic not near genes chr3R 28411044 intergenic not near genes chr3R 28411106 intergenic not near genes chr3R_7_28410001 chr3R_28410001 RAL-805 1714 chr3R 28424174 28424202 chr3R 28424263 28424291 9 88 2.0 3.5 2.8 2.4 117 chr3R 28424174 intron beat-VI + chr3R 28424232 intron beat-VI + chr3R 28424291 intron beat-VI + chr3R_9_28420001 chr3R_28420001 RAL-805 1715 chr3R 28441992 28442013 chr3R 28442087 28442107 5 95 14.5 7.0 10.8 0.4 115 chr3R 28441992 intron beat-VI + chr3R 28442050 intron beat-VI + chr3R 28442107 intron beat-VI + chr3R_5_28440001 chr3R_28440001 RAL-805 1716 chr3R 28594100 28594129 chr3R 28594179 28594208 5 79 0.5 2.0 1.2 2.3 108 chr3R 28594100 5` UTR CR43440 + chr3R 28594154 5` UTR CR43440 + chr3R 28594208 5` UTR CR43440 + chr3R_5_28590001 chr3R_28590001 RAL-805 1717 chr3R 28662372 28662392 chr3R 28662527 28662547 4 154 5.0 3.5 4.2 0.8 175 chr3R 28662372 intergenic not near genes chr3R 28662460 intergenic not near genes chr3R 28662547 intergenic not near genes chr3R_4_28660001 chr3R_28660001 RAL-805 1718 chr3R 28742487 28742512 chr3R 28742563 28742588 6 76 0.5 3.5 2.0 2.0 101 chr3R 28742487 intron AstA-R2 - chr3R 28742538 intron AstA-R2 - chr3R 28742588 intron AstA-R2 - chr3R_6_28740001 chr3R_28740001 RAL-805 1719 chr3R 28787953 28787979 chr3R 28788063 28788089 6 109 3.0 3.5 3.2 1.4 136 chr3R 28787953 intergenic not near genes chr3R 28788021 intergenic not near genes chr3R 28788089 intergenic not near genes chr3R_6_28785001 chr3R_28785001 RAL-805 1720 chr3R 28811571 28811596 chr3R 28811717 28811742 4 146 2.0 1.0 1.5 1.6 171 chr3R 28811571 intergenic wdn - chr3R 28811656 intergenic wdn -,CG1646 + chr3R 28811742 intergenic CG1646 +,wdn - chr3R_4_28810001 chr3R_28810001 RAL-805 1721 chr3R 28830904 28830922 chr3R 28830982 28830995 7 76 0.5 5.0 2.8 1.8 91 chr3R 28830904 intron WASp - chr3R 28830950 intron WASp - chr3R 28830995 intron WASp - chr3R_7_28830001 chr3R_28830001 RAL-805 1722 chr3R 21907534 21907536 chr3R 28831799 28831802 58 6924266 20.5 16.0 18.2 3.0 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_58_25365001 chr3R_25365001 RAL-805 1723 chr3R 28947969 28948000 chr3R 28948081 28948112 10 112 2.5 5.0 3.8 2.1 143 chr3R 28947969 intron CG14521 - chr3R 28948040 intron CG14521 - chr3R 28948112 intron CG14521 - chr3R_10_28945001 chr3R_28945001 RAL-805 1724 chr3R 29055948 29055975 chr3R 29056040 29056066 7 92 27.5 26.0 26.8 0.3 118 chr3R 29055948 5` UTR Sirt7 + chr3R 29056007 5` UTR Sirt7 + chr3R 29056066 5` UTR Sirt7 + chr3R_7_29055001 chr3R_29055001 RAL-805 1725 chr3R 29079382 29079409 chr3R 29080754 29080781 NOF 10 1372 3.0 7.5 5.2 1.6 1399 chr3R 29079382 intron CG11873 + chr3R 29080082 intron CG11873 + chr3R 29080781 intron CG11873 + chr3R_10_29080001 chr3R_29080001 RAL-805 1726 chr3R 29151949 29151966 chr3R 29152041 29152058 4 91 0.0 5.0 2.5 1.1 109 chr3R 29151949 intergenic Slbp -,ligatin - chr3R 29152004 intergenic Slbp -,ligatin - chr3R 29152058 intergenic Slbp -,ligatin - chr3R_4_29150001 chr3R_29150001 RAL-805 1727 chr3R 29213064 29213090 chr3R 29213147 29213173 11 83 4.0 2.0 3.0 2.8 109 chr3R 29213064 intergenic not near genes chr3R 29213118 intergenic not near genes chr3R 29213173 intergenic not near genes chr3R_11_29210001 chr3R_29210001 RAL-805 1728 chr3R 29237247 29237279 chr3R 29239268 29239292 8 2020 22.0 4.5 13.2 0.6 2045 chr3R 29237247 exon CG11951 - chr3R 29238270 intron CG11951 - chr3R 29239292 exon CG31427 - chr3R_8_29235001 chr3R_29235001 RAL-805 1729 chr3R 29256269 29256293 chr3R 29256347 29256373 8 80 4.0 2.5 3.2 1.9 104 chr3R 29256269 intergenic CG45544 +,stg - chr3R 29256321 intergenic CG45544 + chr3R 29256373 intergenic CG45544 + chr3R_8_29255001 chr3R_29255001 RAL-805 1730 chr3R 29332284 29332301 chr3R 29332361 29332378 8 77 1.5 2.5 2.0 2.7 94 chr3R 29332284 intergenic not near genes chr3R 29332331 intergenic not near genes chr3R 29332378 intergenic not near genes chr3R_8_29330001 chr3R_29330001 RAL-805 1731 chr3R 29334237 29334240 chr3R 29334310 29334314 4 75 5.5 1.0 3.2 1.0 77 chr3R 29334237 intergenic not near genes chr3R 29334276 intergenic not near genes chr3R 29334314 intergenic not near genes chr3R_4_29330001 chr3R_29330001 RAL-805 1732 chr3R 29384865 29384876 chr3R 29384989 29384994 5 123 2.0 5.5 3.8 1.0 129 chr3R 29384865 intron Ptp99A + chr3R 29384930 intron Ptp99A + chr3R 29384994 intron Ptp99A + chr3R_5_29380001 chr3R_29380001 RAL-805 1733 chr3R 29406636 29406644 chr3R 29407908 29407930 jockey 4 1282 3.5 5.5 4.5 0.7 1294 chr3R 29406636 intron Ptp99A + chr3R 29407283 intron Ptp99A + chr3R 29407930 intron Ptp99A + chr3R_4_29405001 chr3R_29405001 RAL-805 1734 chr3R 29412012 29412042 chr3R 29412090 29412105 4 74 4.0 3.5 3.8 0.8 93 chr3R 29412012 intron Ptp99A + chr3R 29412058 intron Ptp99A + chr3R 29412105 intron Ptp99A + chr3R_4_29410001 chr3R_29410001 RAL-805 1735 chr3R 29449354 29449391 chr3R 29449432 29449468 18 78 4.0 1.0 2.5 5.1 114 chr3R 29449354 intron Ptp99A + chr3R 29449411 intron Ptp99A + chr3R 29449468 intron Ptp99A + chr3R_18_29445001 chr3R_29445001 RAL-805 1736 chr3R 29505892 29505926 chr3R 29505969 29506003 8 75 1.5 3.5 2.5 2.3 111 chr3R 29505892 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506003 intergenic not near genes chr3R_8_29505001 chr3R_29505001 RAL-805 1737 chr3R 29539430 29539460 chr3R 29539506 29539536 9 76 0.5 0.0 0.2 7.5 106 chr3R 29539430 intergenic not near genes chr3R 29539483 intergenic not near genes chr3R 29539536 intergenic not near genes chr3R_9_29535001 chr3R_29535001 RAL-805 1738 chr3R 29575836 29575842 chr3R 29575919 29575925 4 83 4.0 0.0 2.0 1.3 89 chr3R 29575836 intergenic not near genes chr3R 29575880 intergenic not near genes chr3R 29575925 intergenic not near genes chr3R_4_29575001 chr3R_29575001 RAL-805 1739 chr3R 29650731 29650753 chr3R 29650850 29650871 6 118 2.5 2.5 2.5 1.7 140 chr3R 29650731 intron Dop1R2 - chr3R 29650801 intron Dop1R2 - chr3R 29650871 intron Dop1R2 - chr3R_6_29650001 chr3R_29650001 RAL-805 1740 chr3R 29664614 29664645 chr3R 29664694 29664726 11 80 3.0 2.5 2.8 2.9 112 chr3R 29664614 intergenic ppk21 + chr3R 29664670 intergenic ppk21 + chr3R 29664726 intergenic ppk21 + chr3R_11_29660001 chr3R_29660001 RAL-805 1741 chr3R 29671157 29671188 chr3R 29671233 29671264 7 76 1.5 3.0 2.2 2.2 107 chr3R 29671157 3` UTR ppk30 + chr3R 29671210 3` UTR ppk30 + chr3R 29671264 intron ppk30 + chr3R_7_29670001 chr3R_29670001 RAL-805 1742 chr3R 29719403 29719422 chr3R 29719489 29719508 5 86 2.5 0.5 1.5 2.0 105 chr3R 29719403 intron CG15506 + chr3R 29719456 intron CG15506 + chr3R 29719508 intron CG15506 + chr3R_5_29715001 chr3R_29715001 RAL-805 1743 chr3R 29738266 29738287 chr3R 29739733 29739752 hobo 6 1466 6.0 1.5 3.8 1.2 1486 chr3R 29738266 intergenic CG1969 +,CG7598 + chr3R 29739009 intron CG1969 + chr3R 29739752 5` UTR CG1969 + chr3R_6_29735001 chr3R_29735001 RAL-805 1744 chr3R 29738289 29738298 chr3R 29739730 29739740 hobo 6 1458 3.0 1.5 2.2 1.9 1451 chr3R 29738289 5` UTR CG1969 + chr3R 29739014 intron CG1969 + chr3R 29739740 5` UTR CG1969 + chr3R_6_29735001 chr3R_29735001 RAL-805 1745 chr3R 29754978 29754990 chr3R 29755055 29755067 4 77 0.0 5.0 2.5 1.1 89 chr3R 29754978 intergenic CR44953 -,yata + chr3R 29755022 intergenic CR44953 -,yata + chr3R 29755067 intergenic CR44953 - chr3R_4_29755001 chr3R_29755001 RAL-805 1746 chr3R 29758942 29758970 chr3R 29759019 29759048 12 76 4.0 6.5 5.2 1.9 106 chr3R 29758942 3` UTR CR44953 - chr3R 29758995 3` UTR CR44953 - chr3R 29759048 intergenic CR44953 - chr3R_12_29755001 chr3R_29755001 RAL-805 1747 chr3R 29880583 29880608 chr3R 29880668 29880670 8 80 3.5 1.0 2.2 2.5 87 chr3R 29880583 intron CG31038 + chr3R 29880626 intron CG31038 + chr3R 29880670 intron CG31038 + chr3R_8_29880001 chr3R_29880001 RAL-805 1748 chr3R 29882018 29882051 chr3R 29891175 29891208 roo 11 9156 4.5 2.0 3.2 2.6 9190 chr3R 29882018 intron CG31038 + chr3R 29886613 intron CG31038 + chr3R 29891208 intron CG31038 + chr3R_11_29885001 chr3R_29885001 RAL-805 1749 chr3R 29950574 29950595 chr3R 29950651 29950672 7 77 1.0 5.0 3.0 1.8 98 chr3R 29950574 intergenic TkR99D - chr3R 29950623 intergenic TkR99D - chr3R 29950672 intergenic TkR99D - chr3R_7_29950001 chr3R_29950001 RAL-805 1750 chr3R 29963496 29963511 chr3R 29963596 29963612 6 101 1.5 6.0 3.8 1.2 116 chr3R 29963496 intron TkR99D - chr3R 29963554 intron TkR99D - chr3R 29963612 intron TkR99D - chr3R_6_29960001 chr3R_29960001 RAL-805 1751 chr3R 29976540 29976555 chr3R 29976752 29976767 4 209 2.0 4.0 3.0 1.0 227 chr3R 29976540 intergenic not near genes chr3R 29976654 intergenic not near genes chr3R 29976767 intergenic not near genes chr3R_4_29975001 chr3R_29975001 RAL-805 1752 chr3R 30012169 30012190 chr3R 30012837 30012858 7 667 1.0 2.0 1.5 2.8 689 chr3R 30012169 intron CG7920 - chr3R 30012514 intron CG7920 - chr3R 30012858 intron CG7920 - chr3R_7_30010001 chr3R_30010001 RAL-805 1753 chr3R 30082989 30083011 chr3R 30083065 30083087 8 76 1.0 2.0 1.5 3.2 98 chr3R 30082989 intron sima + chr3R 30083038 intron sima + chr3R 30083087 intron sima + chr3R_8_30080001 chr3R_30080001 RAL-805 1754 chr3R 30084847 30084881 chr3R 30086314 30086348 hobo 11 1465 1.0 4.5 2.8 2.9 1501 chr3R 30084847 intron sima + chr3R 30085598 intron sima + chr3R 30086348 intron sima + chr3R_11_30085001 chr3R_30085001 RAL-805 1755 chr3R 30182756 30182784 chr3R 30182895 30182922 6 138 0.5 3.5 2.0 2.0 166 chr3R 30182756 intergenic not near genes chr3R 30182839 intergenic not near genes chr3R 30182922 intergenic not near genes chr3R_6_30180001 chr3R_30180001 RAL-805 1756 chr3R 30238759 30238795 chr3R 30239923 30239959 1360 6 1164 0.5 4.0 2.2 1.9 1200 chr3R 30238759 intergenic not near genes chr3R 30239359 intergenic not near genes chr3R 30239959 intergenic not near genes chr3R_6_30235001 chr3R_30235001 RAL-805 1757 chr3R 30307128 30307153 chr3R 30307204 30307234 5 80 1.0 4.0 2.5 1.4 106 chr3R 30307128 intron hdc + chr3R 30307181 intron hdc + chr3R 30307234 intron hdc + chr3R_5_30305001 chr3R_30305001 RAL-805 1758 chr3R 30317326 30317352 chr3R 30324915 30324944 roo 7 7591 1.0 2.0 1.5 2.8 7618 chr3R 30317326 intron hdc + chr3R 30321135 intron hdc + chr3R 30324944 intron hdc + chr3R_7_30320001 chr3R_30320001 RAL-805 1759 chr3R 30330491 30330525 chr3R 30330570 30330605 8 79 2.0 4.5 3.2 1.9 114 chr3R 30330491 intron hdc + chr3R 30330548 intron hdc + chr3R 30330605 intron hdc + chr3R_8_30330001 chr3R_30330001 RAL-805 1760 chr3R 30347029 30347035 chr3R 30347113 30347119 4 84 6.0 4.5 5.2 0.6 90 chr3R 30347029 intron hdc + chr3R 30347074 intron hdc + chr3R 30347119 intron hdc + chr3R_4_30345001 chr3R_30345001 RAL-805 1761 chr3R 30375542 30375570 chr3R 30383167 30383195 412 7 7625 1.0 3.0 2.0 2.3 7653 chr3R 30375542 intergenic not near genes chr3R 30379368 intergenic not near genes chr3R 30383195 intergenic not near genes chr3R_7_30375001 chr3R_30375001 RAL-805 1762 chr3R 30396219 30396243 chr3R 30404483 30404509 roo 8 8266 2.5 6.5 4.5 1.5 8290 chr3R 30396219 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404509 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 RAL-805 1763 chr3R 30448209 30448225 chr3R 30448283 30448304 6 78 3.0 6.0 4.5 1.1 95 chr3R 30448209 intron aralar1 - chr3R 30448256 intron aralar1 - chr3R 30448304 intron aralar1 - chr3R_6_30445001 chr3R_30445001 RAL-805 1764 chr3R 30456398 30456421 chr3R 30456477 30456500 6 80 1.0 2.0 1.5 2.4 102 chr3R 30456398 intergenic CG2224 - chr3R 30456449 3` UTR CG2224 - chr3R 30456500 3` UTR CG2224 - chr3R_6_30455001 chr3R_30455001 RAL-805 1765 chr3R 30458015 30458046 chr3R 30458095 30458126 12 80 5.0 2.0 3.5 2.7 111 chr3R 30458015 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458126 intron CG2224 - chr3R_12_30455001 chr3R_30455001 RAL-805 1766 chr3R 30480480 30480513 chr3R 30482942 30482979 jockey 9 2466 1.0 5.0 3.0 2.2 2499 chr3R 30480480 intron PH4alphaEFB + chr3R 30481730 intron PH4alphaEFB + chr3R 30482979 intron PH4alphaEFB + chr3R_9_30480001 chr3R_30480001 RAL-805 1767 chr3R 30536509 30536520 chr3R 30536583 30536600 5 78 3.0 0.0 1.5 2.0 91 chr3R 30536509 intron tmod + chr3R 30536554 intron tmod + chr3R 30536600 intron tmod + chr3R_5_30535001 chr3R_30535001 RAL-805 1768 chr3R 30539807 30539836 chr3R 30539884 30539913 6 77 4.0 2.0 3.0 1.5 106 chr3R 30539807 intron tmod + chr3R 30539860 intron tmod + chr3R 30539913 intron tmod + chr3R_6_30535001 chr3R_30535001 RAL-805 1769 chr3R 30600788 30600825 chr3R 30600884 30600905 11 93 1.0 4.0 2.5 3.1 117 chr3R 30600788 intron CG2246 - chr3R 30600846 intron CG2246 - chr3R 30600905 intron CG2246 - chr3R_11_30600001 chr3R_30600001 RAL-805 1770 chr3R 30627610 30627633 chr3R 30627690 30627696 11 76 4.5 5.0 4.8 1.9 86 chr3R 30627610 exon CG2267 - chr3R 30627653 exon CG2267 - chr3R 30627696 exon CG2267 - chr3R_11_30625001 chr3R_30625001 RAL-805 1771 chr3R 30679520 30679552 chr3R 30686989 30687021 blood 8 7469 3.5 3.0 3.2 1.9 7501 chr3R 30679520 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687021 intergenic not near genes chr3R_8_30680001 chr3R_30680001 RAL-805 1772 chr3R 30818809 30818846 chr3R 30820374 30820411 1360 10 1564 1.0 1.5 1.2 4.5 1602 chr3R 30818809 intron cindr + chr3R 30819610 intron cindr + chr3R 30820411 intron cindr + chr3R_10_30815001 chr3R_30815001 RAL-805 1773 chr3R 30835666 30835672 chr3R 30835739 30835748 5 75 8.0 2.0 5.0 0.8 82 chr3R 30835666 intron CG15544 + chr3R 30835707 intron CG15544 + chr3R 30835748 intron CG15544 + chr3R_5_30835001 chr3R_30835001 RAL-805 1774 chr3R 30835673 30835691 chr3R 30835735 30835767 6 73 5.0 2.0 3.5 1.3 94 chr3R 30835673 intron CG15544 + chr3R 30835720 intron CG15544 + chr3R 30835767 intron CG15544 + chr3R_6_30835001 chr3R_30835001 RAL-805 1775 chr3R 30843842 30843863 chr3R 30843952 30843973 10 110 4.0 2.0 3.0 2.5 131 chr3R 30843842 intergenic not near genes chr3R 30843908 intergenic not near genes chr3R 30843973 intergenic not near genes chr3R_10_30840001 chr3R_30840001 RAL-805 1776 chr3R 30973132 30973162 chr3R 30973293 30973323 8 161 1.5 2.5 2.0 2.7 191 chr3R 30973132 intron 5-HT7 - chr3R 30973228 intron 5-HT7 - chr3R 30973323 intron 5-HT7 - chr3R_8_30970001 chr3R_30970001 RAL-805 1777 chr3R 30994122 30994152 chr3R 30994232 30994262 13 110 2.5 0.0 1.2 5.9 140 chr3R 30994122 intron 5-HT7 - chr3R 30994192 intron 5-HT7 - chr3R 30994262 intron 5-HT7 - chr3R_13_30990001 chr3R_30990001 RAL-805 1778 chr3R 31024554 31024585 chr3R 31024639 31024660 10 84 2.5 3.5 3.0 2.5 106 chr3R 31024554 intergenic not near genes chr3R 31024607 intergenic not near genes chr3R 31024660 intergenic not near genes chr3R_10_31020001 chr3R_31020001 RAL-805 1779 chr3R 31042110 31042140 chr3R 31042197 31042223 12 87 3.0 1.0 2.0 4.0 113 chr3R 31042110 intron CanA1 + chr3R 31042166 intron CanA1 + chr3R 31042223 intron CanA1 + chr3R_12_31040001 chr3R_31040001 RAL-805 1780 chr3R 31059307 31059334 chr3R 31059397 31059424 10 90 2.5 5.5 4.0 2.0 117 chr3R 31059307 intron dco - chr3R 31059366 intron dco - chr3R 31059424 intron dco - chr3R_10_31055001 chr3R_31055001 RAL-805 1781 chr3R 31072822 31072858 chr3R 31073180 31073216 14 358 3.5 1.0 2.2 4.4 394 chr3R 31072822 intron Sox100B + chr3R 31073019 intron Sox100B + chr3R 31073216 exon Sox100B + chr3R_14_31070001 chr3R_31070001 RAL-805 1782 chr3R 31074230 31074261 chr3R 31081828 31081859 springer 6 7598 4.5 4.5 4.5 1.1 7629 chr3R 31074230 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081859 intron Sox100B + chr3R_6_31075001 chr3R_31075001 RAL-805 1783 chr3R 31087665 31087697 chr3R 31087853 31087884 8 187 1.0 2.0 1.5 3.2 219 chr3R 31087665 intergenic not near genes chr3R 31087774 intergenic not near genes chr3R 31087884 intergenic not near genes chr3R_8_31085001 chr3R_31085001 RAL-805 1784 chr3R 31137172 31137185 chr3R 31137238 31137263 5 73 1.5 2.0 1.8 1.8 91 chr3R 31137172 intron Gycbeta100B + chr3R 31137218 intron Gycbeta100B + chr3R 31137263 intron Gycbeta100B + chr3R_5_31135001 chr3R_31135001 RAL-805 1785 chr3R 31253060 31253087 chr3R 31253746 31253773 10 690 24.0 32.0 28.0 0.3 713 chr3R 31253060 exon mRpL32 + chr3R 31253416 exon mRpL32 + chr3R 31253773 exon CG1750 - chr3R_10_31250001 chr3R_31250001 RAL-805 1786 chr3R 31279383 31279408 chr3R 31285573 31285599 diver 10 6190 0.5 6.5 3.5 2.2 6216 chr3R 31279383 intergenic not near genes chr3R 31282491 intergenic not near genes chr3R 31285599 intergenic not near genes chr3R_10_31280001 chr3R_31280001 RAL-805 1787 chr3R 31320165 31320193 chr3R 31320260 31320288 8 95 1.5 4.5 3.0 2.0 123 chr3R 31320165 intron CG34347 + chr3R 31320226 intron CG34347 + chr3R 31320288 intron CG34347 + chr3R_8_31320001 chr3R_31320001 RAL-805 1788 chr3R 31413094 31413123 chr3R 31418294 31418323 copia 14 5200 1.5 0.0 0.8 7.8 5229 chr3R 31413094 intron Gprk2 + chr3R 31415708 intron Gprk2 + chr3R 31418323 intron Gprk2 + chr3R_14_31415001 chr3R_31415001 RAL-805 1789 chr3R 31435366 31435391 chr3R 31435518 31435543 14 151 3.0 4.5 3.8 2.9 177 chr3R 31435366 intron Gprk2 + chr3R 31435454 intron Gprk2 + chr3R 31435543 intron Gprk2 + chr3R_14_31435001 chr3R_31435001 RAL-805 1790 chr3R 31450766 31450791 chr3R 31450932 31450957 9 168 28.0 23.5 25.8 0.3 191 chr3R 31450766 intron Gprk2 + chr3R 31450862 intron Gprk2 + chr3R 31450957 intron Gprk2 + chr3R_9_31450001 chr3R_31450001 RAL-805 1791 chr3R 31604373 31604395 chr3R 31604764 31604785 9 391 4.5 1.5 3.0 2.2 412 chr3R 31604373 intron CycG - chr3R 31604579 intron CycG - chr3R 31604785 intron CycG - chr3R_9_31600001 chr3R_31600001 RAL-805 1792 chr3R 31691531 31691560 chr3R 31696297 31696306 Doc 7 4763 3.0 6.5 4.8 1.2 4775 chr3R 31691531 intergenic not near genes chr3R 31693918 intergenic not near genes chr3R 31696306 intergenic not near genes chr3R_7_31690001 chr3R_31690001 RAL-805 1793 chr3R 31705740 31705762 chr3R 31706197 31706219 16 457 3.5 6.0 4.8 2.8 479 chr3R 31705740 intergenic CR45052 - chr3R 31705980 intergenic CR45052 - chr3R 31706219 intergenic not near genes chr3R_16_31705001 chr3R_31705001 RAL-805 1794 chr3R 31805128 31805161 chr3R 31805204 31805237 13 76 0.5 3.5 2.0 4.3 109 chr3R 31805128 5` UTR CG42233 - chr3R 31805182 5` UTR CG42233 - chr3R 31805237 5` UTR CG42233 - chr3R_13_31805001 chr3R_31805001 RAL-805 1795 chr3R 31831537 31831570 chr3R 31831614 31831649 15 78 5.0 2.5 3.8 3.1 112 chr3R 31831537 intron RhoGAP100F + chr3R 31831593 intron RhoGAP100F + chr3R 31831649 intron RhoGAP100F + chr3R_15_31830001 chr3R_31830001 RAL-805 1796 chr3R 31911678 31911713 chr3R 31911762 31911799 15 84 3.0 2.0 2.5 4.3 121 chr3R 31911678 intron heph - chr3R 31911738 intron heph - chr3R 31911799 intron heph - chr3R_15_31910001 chr3R_31910001 RAL-805 1797 chr3R 31924599 31924606 chr3R 31924680 31924687 5 81 0.0 2.0 1.0 2.5 88 chr3R 31924599 intron heph - chr3R 31924643 intron heph - chr3R 31924687 intron heph - chr3R_5_31920001 chr3R_31920001 RAL-805 1798 chr3R 31997903 31997921 chr3R 32005581 32005599 blood 9 7678 3.0 3.5 3.2 2.1 7696 chr3R 31997903 intron heph - chr3R 32001751 intron heph - chr3R 32005599 intron heph - chr3R_9_32000001 chr3R_32000001 RAL-805 1799 chr3R 32022330 32022353 chr3R 32022431 32022455 13 102 5.0 4.5 4.8 2.2 125 chr3R 32022330 5` UTR CR45557 + chr3R 32022392 5` UTR CR45557 + chr3R 32022455 5` UTR CR45557 + chr3R_13_32020001 chr3R_32020001 RAL-805 1800 chr3R 32045574 32045603 chr3R 32045655 32045684 5 81 1.5 3.0 2.2 1.6 110 chr3R 32045574 3` UTR krz - chr3R 32045629 3` UTR krz - chr3R 32045684 3` UTR krz - chr3R_5_32045001 chr3R_32045001 RAL-805 1801 chr4 257401 257427 chr4 257571 257597 6 169 5.5 1.0 3.2 1.4 196 chr4 257401 exon RhoGAP102A + chr4 257499 intron RhoGAP102A + chr4 257597 intron RhoGAP102A + chr4_6_255001 chr4_255001 RAL-805 1802 chr4 671603 671636 chr4 680186 680215 Tirant 17 8582 4.0 4.0 4.0 3.4 8612 chr4 671603 intron CG11360 + chr4 675909 intron CG11360 + chr4 680215 intron CG11360 + chr4_17_675001 chr4_675001 RAL-805 1803 chr4 959632 959643 chr4 959811 959821 6 178 2.0 5.5 3.8 1.2 189 chr4 959632 intergenic CR44030 +,CR45201 - chr4 959726 5` UTR CR44030 + chr4 959821 5` UTR CR44030 + chr4_6_955001 chr4_955001 RAL-805 1804 chr4 959645 959656 chr4 959810 959835 6 176 1.5 5.0 3.2 1.4 190 chr4 959645 intergenic CR44030 +,CR45201 - chr4 959740 5` UTR CR44030 + chr4 959835 5` UTR CR44030 + chr4_6_955001 chr4_955001 RAL-805 1805 chrX 295858 295882 chrX 303478 303502 412 8 7619 4.0 2.0 3.0 2.0 7644 chrX 295858 intron CG3777 + chrX 299680 intron CG3777 + chrX 303502 intron CG3777 + chrX_8_295001 chrX_295001 RAL-805 1806 chrX 318470 318498 chrX 323556 323584 flea 5 5085 1.5 2.5 2.0 1.7 5114 chrX 318470 intron,intron CG3777 +,CG32816 - chrX 321027 intron,intron CG3777 +,CG32816 - chrX 323584 intron,intron CG3777 +,CG32816 - chrX_5_320001 chrX_320001 RAL-805 1807 chrX 428419 428449 chrX 434604 434634 3S18 8 6184 3.5 1.5 2.5 2.3 6215 chrX 428419 intron CG32816 - chrX 431526 intron CG32816 - chrX 434634 intron CG32816 - chrX_8_430001 chrX_430001 RAL-805 1808 chrX 440998 441024 chrX 441076 441098 7 76 2.0 2.5 2.2 2.2 100 chrX 440998 intron CG32816 - chrX 441048 intron CG32816 - chrX 441098 intron CG32816 - chrX_7_440001 chrX_440001 RAL-805 1809 chrX 450364 450395 chrX 450442 450473 7 78 2.0 2.0 2.0 2.3 109 chrX 450364 intron CG32816 - chrX 450418 intron CG32816 - chrX 450473 intron CG32816 - chrX_7_450001 chrX_450001 RAL-805 1810 chrX 482659 482684 chrX 482744 482769 4 85 1.0 3.0 2.0 1.3 110 chrX 482659 3` UTR CG3176 + chrX 482714 3` UTR CG3176 + chrX 482769 intergenic CG3176 +,CG18273 - chrX_4_480001 chrX_480001 RAL-805 1811 chrX 494606 494633 chrX 494694 494725 6 91 2.0 4.5 3.2 1.4 119 chrX 494606 intergenic CG17778 + chrX 494666 5` UTR CG17778 + chrX 494725 intron CG17778 + chrX_6_490001 chrX_490001 RAL-805 1812 chrX 667645 667680 chrX 667729 667763 8 84 1.5 1.0 1.2 3.6 118 chrX 667645 intergenic not near genes chrX 667704 intergenic not near genes chrX 667763 intergenic not near genes chrX_8_665001 chrX_665001 RAL-805 1813 chrX 670263 670295 chrX 670343 670368 8 79 0.5 1.0 0.8 4.4 105 chrX 670263 intergenic not near genes chrX 670316 intergenic not near genes chrX 670368 intergenic not near genes chrX_8_670001 chrX_670001 RAL-805 1814 chrX 680838 680870 chrX 680920 680953 17 79 1.5 4.5 3.0 4.2 115 chrX 680838 intergenic not near genes chrX 680896 intergenic not near genes chrX 680953 intergenic not near genes chrX_17_680001 chrX_680001 RAL-805 1815 chrX 706805 706822 chrX 707169 707186 7 363 0.0 5.0 2.5 2.0 381 chrX 706805 intron sdk + chrX 706996 intron sdk + chrX 707186 intron sdk + chrX_7_705001 chrX_705001 RAL-805 1816 chrX 771233 771253 chrX 771309 771331 10 77 2.5 6.5 4.5 1.8 98 chrX 771233 intron fz3 + chrX 771282 intron fz3 + chrX 771331 intron fz3 + chrX_10_770001 chrX_770001 RAL-805 1817 chrX 778125 778157 chrX 778215 778247 11 90 3.5 1.5 2.5 3.1 122 chrX 778125 intron fz3 + chrX 778186 intron fz3 + chrX 778247 intron fz3 + chrX_11_775001 chrX_775001 RAL-805 1818 chrX 780592 780603 chrX 780668 780679 6 75 0.0 0.0 0.0 6.0 87 chrX 780592 intron fz3 + chrX 780636 intron fz3 + chrX 780679 intron fz3 + chrX_6_780001 chrX_780001 RAL-805 1819 chrX 827602 827634 chrX 835394 835420 roo 6 7791 2.5 0.0 1.2 2.7 7818 chrX 827602 intron CG43867 - chrX 831511 intron CG43867 - chrX 835420 intron CG43867 - chrX_6_830001 chrX_830001 RAL-805 1820 chrX 888710 888726 chrX 888789 888804 4 79 5.0 0.0 2.5 1.1 94 chrX 888710 intron CG43867 - chrX 888757 intron CG43867 - chrX 888804 intron CG43867 - chrX_4_885001 chrX_885001 RAL-805 1821 chrX 906705 906734 chrX 908494 908523 S-element 7 1789 2.5 6.0 4.2 1.3 1818 chrX 906705 intron CG43867 - chrX 907614 intron CG43867 - chrX 908523 intron CG43867 - chrX_7_905001 chrX_905001 RAL-805 1822 chrX 1022732 1022764 chrX 1022865 1022897 12 131 1.5 3.5 2.5 3.4 165 chrX 1022732 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1022814 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1022897 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_12_1020001 chrX_1020001 RAL-805 1823 chrX 1053117 1053120 chrX 16983076 16983077 5 15929958 7.5 10.5 9.0 0.5 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-805 1824 chrX 1253733 1253758 chrX 1253814 1253837 11 81 2.5 3.5 3.0 2.8 104 chrX 1253733 intron Atf3 - chrX 1253785 intron Atf3 - chrX 1253837 intron Atf3 - chrX_11_1250001 chrX_1250001 RAL-805 1825 chrX 1357779 1357813 chrX 1367949 1367982 Doc 7 10169 3.5 2.0 2.8 1.8 10203 chrX 1357779 intergenic png - chrX 1362880 intergenic not near genes chrX 1367982 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-805 1826 chrX 1930538 1930570 chrX 1938109 1938141 opus 4 7570 1.5 2.0 1.8 1.4 7603 chrX 1930538 intergenic CG11596 + chrX 1934340 intergenic not near genes chrX 1938141 3` UTR CG3857 - chrX_4_1930001 chrX_1930001 RAL-805 1827 chrX 1954884 1954916 chrX 1962824 1962841 Stalker2 4 7934 2.5 2.0 2.2 1.2 7957 chrX 1954884 intron Hr4 + chrX 1958862 intron Hr4 + chrX 1962841 intron Hr4 + chrX_4_1955001 chrX_1955001 RAL-805 1828 chrX 2069370 2069388 chrX 2069469 2069488 5 100 2.5 1.0 1.8 1.8 118 chrX 2069370 intron,exon CG4199 -,CG4194 + chrX 2069429 intron,3` UTR CG4199 -,CG4194 + chrX 2069488 intron,3` UTR CG4199 -,CG4194 + chrX_5_2065001 chrX_2065001 RAL-805 1829 chrX 2069389 2069401 chrX 2069466 2069501 4 94 2.0 0.5 1.2 1.8 112 chrX 2069389 intron,exon CG4199 -,CG4194 + chrX 2069445 intron,3` UTR CG4199 -,CG4194 + chrX 2069501 intron,3` UTR CG4199 -,CG4194 + chrX_4_2065001 chrX_2065001 RAL-805 1830 chrX 2664394 2664418 chrX 2665537 2665564 1360 9 1145 1.0 4.5 2.8 2.4 1170 chrX 2664394 intron sgg + chrX 2664979 intron sgg + chrX 2665564 intron sgg + chrX_9_2660001 chrX_2660001 RAL-805 1831 chrX 2888119 2888144 chrX 2888197 2888219 5 77 6.0 3.5 4.8 0.9 100 chrX 2888119 intron kirre + chrX 2888169 intron kirre + chrX 2888219 intron kirre + chrX_5_2885001 chrX_2885001 RAL-805 1832 chrX 3075633 3075664 chrX 3080939 3080969 Transpac 4 5306 1.0 2.0 1.5 1.6 5336 chrX 3075633 intron kirre + chrX 3078301 intron kirre + chrX 3080969 intron kirre + chrX_4_3075001 chrX_3075001 RAL-805 1833 chrX 3306346 3306358 chrX 3306428 3306440 4 82 2.5 0.0 1.2 1.8 94 chrX 3306346 intron dnc + chrX 3306393 intron dnc + chrX 3306440 intron dnc + chrX_4_3305001 chrX_3305001 RAL-805 1834 chrX 3365630 3365663 chrX 3365783 3365813 4 152 1.0 2.0 1.5 1.6 183 chrX 3365630 intergenic not near genes chrX 3365722 intergenic not near genes chrX 3365813 intergenic not near genes chrX_4_3365001 chrX_3365001 RAL-805 1835 chrX 3415017 3415047 chrX 3421202 3421232 3S18 4 6185 1.0 0.5 0.8 2.2 6215 chrX 3415017 intron,intron CR44999 +,CG12535 - chrX 3418124 intron,intron CR44999 +,CG12535 - chrX 3421232 intron,intron CR44999 +,CG12535 - chrX_4_3415001 chrX_3415001 RAL-805 1836 chrX 3459982 3460011 chrX 3460059 3460088 9 76 3.5 3.0 3.2 2.1 106 chrX 3459982 intron,intron CR44999 +,CG16782 - chrX 3460035 intron,5` UTR CR44999 +,CG16782 - chrX 3460088 intron,5` UTR CR44999 +,CG16782 - chrX_9_3460001 chrX_3460001 RAL-805 1837 chrX 3493097 3493125 chrX 3502256 3502284 roo 5 9159 3.0 3.5 3.2 1.2 9187 chrX 3493097 intron,intron CR44999 +,Gas8 - chrX 3497690 intron,intron CR44999 +,Gas8 - chrX 3502284 intron,intron CR44999 +,Gas8 - chrX_5_3495001 chrX_3495001 RAL-805 1838 chrX 3535413 3535417 chrX 3535504 3535508 5 91 6.0 6.0 6.0 0.7 95 chrX 3535413 intron CG32791 - chrX 3535460 intron CG32791 - chrX 3535508 intron CG32791 - chrX_5_3535001 chrX_3535001 RAL-805 1839 chrX 3597557 3597578 chrX 3619725 3619746 roo 9 22168 3.0 4.5 3.8 1.9 22189 chrX 3597557 intron AstA-R1 + chrX 3608652 intron AstA-R1 + chrX 3619746 intron AstA-R1 + chrX_9_3605001 chrX_3605001 RAL-805 1840 chrX 3620469 3620485 chrX 3620567 3620584 5 98 2.0 3.0 2.5 1.4 115 chrX 3620469 intron AstA-R1 + chrX 3620526 intron AstA-R1 + chrX 3620584 intron AstA-R1 + chrX_5_3620001 chrX_3620001 RAL-805 1841 chrX 3630550 3630576 chrX 3630626 3630652 8 76 1.5 2.5 2.0 2.7 102 chrX 3630550 intron AstA-R1 + chrX 3630601 intron AstA-R1 + chrX 3630652 intron AstA-R1 + chrX_8_3630001 chrX_3630001 RAL-805 1842 chrX 3636212 3636224 chrX 3637121 3637154 6 927 1.5 1.5 1.5 2.4 942 chrX 3636212 intron AstA-R1 + chrX 3636683 intron AstA-R1 + chrX 3637154 intron AstA-R1 + chrX_6_3635001 chrX_3635001 RAL-805 1843 chrX 3703717 3703727 chrX 3703805 3703805 5 85 3.0 3.0 3.0 1.2 88 chrX 3703717 intergenic CR45102 + chrX 3703761 intergenic CR45102 + chrX 3703805 intergenic not near genes chrX_5_3700001 chrX_3700001 RAL-805 1844 chrX 3713102 3713132 chrX 3713210 3713241 6 108 2.0 0.5 1.2 2.7 139 chrX 3713102 intron Rala - chrX 3713172 intron Rala - chrX 3713241 intron Rala - chrX_6_3710001 chrX_3710001 RAL-805 1845 chrX 3726760 3726788 chrX 3730157 3730185 NOF 7 3397 1.5 0.0 0.8 3.9 3425 chrX 3726760 intron tlk + chrX 3728472 intron tlk + chrX 3730185 intron tlk + chrX_7_3725001 chrX_3725001 RAL-805 1846 chrX 3881271 3881292 chrX 3881410 3881431 4 139 4.0 0.5 2.2 1.2 160 chrX 3881271 intron VhaAC39-1 + chrX 3881351 intron VhaAC39-1 + chrX 3881431 intron VhaAC39-1 + chrX_4_3880001 chrX_3880001 RAL-805 1847 chrX 3891151 3891178 chrX 3891263 3891296 6 116 2.5 3.5 3.0 1.5 145 chrX 3891151 intergenic CG42541 - chrX 3891224 intergenic CG42541 - chrX 3891296 intergenic CG42541 - chrX_6_3890001 chrX_3890001 RAL-805 1848 chrX 3916143 3916153 chrX 3916207 3916241 4 82 2.5 2.0 2.2 1.2 98 chrX 3916143 intron CG42541 - chrX 3916192 intron CG42541 - chrX 3916241 intron CG42541 - chrX_4_3915001 chrX_3915001 RAL-805 1849 chrX 3986862 3986893 chrX 3994494 3994526 412 5 7633 2.0 3.5 2.8 1.3 7664 chrX 3986862 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994526 intergenic not near genes chrX_5_3990001 chrX_3990001 RAL-805 1850 chrX 4021165 4021196 chrX 4021263 4021294 9 98 2.5 0.5 1.5 3.6 129 chrX 4021165 intergenic not near genes chrX 4021230 intergenic not near genes chrX 4021294 intergenic not near genes chrX_9_4020001 chrX_4020001 RAL-805 1851 chrX 4157892 4157925 chrX 4164927 4164960 297 4 7035 2.0 3.0 2.5 1.1 7068 chrX 4157892 intron Fas2 - chrX 4161426 intron Fas2 - chrX 4164960 intron Fas2 - chrX_4_4160001 chrX_4160001 RAL-805 1852 chrX 4358087 4358114 chrX 4358189 4358216 9 102 1.5 0.0 0.8 5.0 129 chrX 4358087 intron norpA + chrX 4358152 intron norpA + chrX 4358216 intron norpA + chrX_9_4355001 chrX_4355001 RAL-805 1853 chrX 4396974 4397093 chrX 4397059 4397179 6 83 0.0 0.5 0.2 5.0 205 chrX 4396974 intron CR32773 - chrX 4397076 intron CR32773 - chrX 4397179 intron CR32773 - chrX_6_4395001 chrX_4395001 RAL-805 1854 chrX 4731814 4731832 chrX 4736907 4736925 jockey 11 5093 4.0 2.0 3.0 2.8 5111 chrX 4731814 intergenic not near genes chrX 4734370 intergenic not near genes chrX 4736925 intergenic not near genes chrX_11_4730001 chrX_4730001 RAL-805 1855 chrX 4757384 4757404 chrX 4757463 4757483 7 79 3.0 1.5 2.2 2.2 99 chrX 4757384 intergenic not near genes chrX 4757434 intergenic not near genes chrX 4757483 intergenic not near genes chrX_7_4755001 chrX_4755001 RAL-805 1856 chrX 4763249 4763284 chrX 4763737 4763772 Stalker4 9 487 3.0 0.5 1.8 3.2 523 chrX 4763249 intergenic not near genes chrX 4763510 intergenic not near genes chrX 4763772 intergenic not near genes chrX_9_4760001 chrX_4760001 RAL-805 1857 chrX 4792382 4792409 chrX 4792815 4792842 jockey 4 430 2.0 4.5 3.2 1.0 460 chrX 4792382 intergenic not near genes chrX 4792612 intergenic not near genes chrX 4792842 intergenic not near genes chrX_4_4790001 chrX_4790001 RAL-805 1858 chrX 4827649 4827677 chrX 4827731 4827759 11 82 1.5 1.5 1.5 4.4 110 chrX 4827649 intergenic not near genes chrX 4827704 intergenic not near genes chrX 4827759 intergenic not near genes chrX_11_4825001 chrX_4825001 RAL-805 1859 chrX 4827973 4827987 chrX 4835344 4835358 Stalker4 4 7371 5.0 3.5 4.2 0.8 7385 chrX 4827973 intergenic not near genes chrX 4831666 intergenic not near genes chrX 4835358 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-805 1860 chrX 4878878 4878908 chrX 4878987 4879017 4 109 0.0 0.5 0.2 3.3 139 chrX 4878878 intron CG42594 + chrX 4878948 intron CG42594 + chrX 4879017 intron CG42594 + chrX_4_4875001 chrX_4875001 RAL-805 1861 chrX 4893367 4893385 chrX 4893634 4893654 5 268 3.0 2.5 2.8 1.3 287 chrX 4893367 intron CG42594 + chrX 4893510 intron CG42594 + chrX 4893654 intron CG42594 + chrX_5_4890001 chrX_4890001 RAL-805 1862 chrX 4990043 4990065 chrX 4997257 4997279 roo 4 7214 1.0 0.5 0.8 2.2 7236 chrX 4990043 intron CR44833 - chrX 4993661 intron CR44833 - chrX 4997279 intron CR44833 - chrX_4_4990001 chrX_4990001 RAL-805 1863 chrX 5220397 5220416 chrX 5220637 5220657 6 241 0.0 3.5 1.8 2.1 260 chrX 5220397 intron,intron CG15465 +,rg + chrX 5220527 intron,intron CG15465 +,rg + chrX 5220657 intron,intron CG15465 +,rg + chrX_6_5220001 chrX_5220001 RAL-805 1864 chrX 5338714 5338733 chrX 5339965 5339986 jockey 4 1252 2.5 3.0 2.8 1.1 1272 chrX 5338714 intergenic not near genes chrX 5339350 intergenic not near genes chrX 5339986 intergenic SK + chrX_4_5335001 chrX_5335001 RAL-805 1865 chrX 5345439 5345463 chrX 5345551 5345575 8 112 2.5 4.0 3.2 1.9 136 chrX 5345439 intron SK + chrX 5345507 intron SK + chrX 5345575 intron SK + chrX_8_5345001 chrX_5345001 RAL-805 1866 chrX 5349278 5349304 chrX 5349355 5349381 6 77 0.5 1.5 1.0 3.0 103 chrX 5349278 intron SK + chrX 5349330 intron SK + chrX 5349381 intron SK + chrX_6_5345001 chrX_5345001 RAL-805 1867 chrX 5456590 5456611 chrX 5456705 5456726 6 115 3.5 3.0 3.2 1.4 136 chrX 5456590 intron SPR + chrX 5456658 intron SPR + chrX 5456726 intron SPR + chrX_6_5455001 chrX_5455001 RAL-805 1868 chrX 5473592 5473613 chrX 5473663 5473689 9 73 1.0 1.0 1.0 4.5 97 chrX 5473592 intron SPR + chrX 5473640 intron SPR + chrX 5473689 intron SPR + chrX_9_5470001 chrX_5470001 RAL-805 1869 chrX 5725029 5725058 chrX 5725133 5725161 5 104 1.0 2.0 1.5 2.0 132 chrX 5725029 intron CG32758 - chrX 5725095 intron CG32758 - chrX 5725161 intron CG32758 - chrX_5_5725001 chrX_5725001 RAL-805 1870 chrX 5726271 5726278 chrX 5726605 5726620 4 340 0.0 2.0 1.0 2.0 349 chrX 5726271 intron CG32758 - chrX 5726446 intron CG32758 - chrX 5726620 intron CG32758 - chrX_4_5725001 chrX_5725001 RAL-805 1871 chrX 5883812 5883838 chrX 5884053 5884079 pogo 8 241 1.5 2.0 1.8 2.9 267 chrX 5883812 intron CR45668 - chrX 5883946 intron CR45668 - chrX 5884079 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-805 1872 chrX 5884163 5884174 chrX 5884404 5884415 pogo 4 241 0.0 1.0 0.5 2.7 252 chrX 5884163 intron CR45668 - chrX 5884289 intron CR45668 - chrX 5884415 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-805 1873 chrX 6056427 6056434 chrX 6056504 6056511 6 77 6.0 1.0 3.5 1.3 84 chrX 6056427 intron CG5921 + chrX 6056469 intron CG5921 + chrX 6056511 intron CG5921 + chrX_6_6055001 chrX_6055001 RAL-805 1874 chrX 6171584 6171616 chrX 6179017 6179049 Quasimodo 11 7432 1.5 2.5 2.0 3.7 7465 chrX 6171584 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179049 intron Ca-alpha1T - chrX_11_6175001 chrX_6175001 RAL-805 1875 chrX 6185974 6185992 chrX 6186073 6186091 5 99 1.5 3.5 2.5 1.4 117 chrX 6185974 intron Ca-alpha1T - chrX 6186032 intron Ca-alpha1T - chrX 6186091 intron Ca-alpha1T - chrX_5_6185001 chrX_6185001 RAL-805 1876 chrX 6198790 6198821 chrX 6198880 6198910 4 90 1.5 3.0 2.2 1.2 120 chrX 6198790 intergenic CG32751 -,CG43090 - chrX 6198850 intergenic CG32751 -,CG43090 - chrX 6198910 intergenic CG32751 -,CG43090 - chrX_4_6195001 chrX_6195001 RAL-805 1877 chrX 6278972 6278977 chrX 6279049 6279054 4 76 1.5 5.5 3.5 0.9 82 chrX 6278972 intron Ubi-p5E - chrX 6279013 intron Ubi-p5E - chrX 6279054 intron Ubi-p5E - chrX_4_6275001 chrX_6275001 RAL-805 1878 chrX 6335239 6335244 chrX 6337749 6337754 Tirant 4 2510 0.0 7.5 3.8 0.8 2515 chrX 6335239 intergenic not near genes chrX 6336496 intergenic not near genes chrX 6337754 intergenic CG3842 + chrX_4_6335001 chrX_6335001 RAL-805 1879 chrX 6350577 6350599 chrX 6350667 6350689 7 90 4.0 5.0 4.5 1.3 112 chrX 6350577 intergenic kdn +,CG3446 - chrX 6350633 5` UTR kdn + chrX 6350689 5` UTR kdn + chrX_7_6350001 chrX_6350001 RAL-805 1880 chrX 6392874 6392893 chrX 6397639 6397658 Doc 8 4765 2.0 3.0 2.5 2.3 4784 chrX 6392874 intergenic not near genes chrX 6395266 intergenic not near genes chrX 6397658 intergenic not near genes chrX_8_6395001 chrX_6395001 RAL-805 1881 chrX 6562817 6562848 chrX 6571299 6571325 Tirant 9 8480 1.5 2.0 1.8 3.2 8508 chrX 6562817 intron CG34417 + chrX 6567071 intron CG34417 + chrX 6571325 intron CG34417 + chrX_9_6565001 chrX_6565001 RAL-805 1882 chrX 6578804 6578822 chrX 6578893 6578911 4 89 1.0 1.5 1.2 1.8 107 chrX 6578804 intron CG34417 + chrX 6578858 intron CG34417 + chrX 6578911 intron CG34417 + chrX_4_6575001 chrX_6575001 RAL-805 1883 chrX 6605483 6605496 chrX 6608505 6608518 Burdock 5 3022 2.5 5.0 3.8 1.0 3035 chrX 6605483 intron pigs + chrX 6607000 intron pigs + chrX 6608518 intron pigs + chrX_5_6605001 chrX_6605001 RAL-805 1884 chrX 6805015 6805050 chrX 6805095 6805130 6 79 2.5 2.5 2.5 1.7 115 chrX 6805015 intron pod1 + chrX 6805072 intron pod1 + chrX 6805130 intron pod1 + chrX_6_6805001 chrX_6805001 RAL-805 1885 chrX 7023599 7023627 chrX 7030989 7031017 Tabor 6 7387 5.0 2.5 3.8 1.2 7418 chrX 7023599 intron CG12541 - chrX 7027308 intron CG12541 - chrX 7031017 intron CG12541 - chrX_6_7025001 chrX_7025001 RAL-805 1886 chrX 7125245 7125275 chrX 7134404 7134434 roo 5 9159 1.0 2.5 1.8 1.8 9189 chrX 7125245 intergenic not near genes chrX 7129840 intergenic not near genes chrX 7134434 intergenic not near genes chrX_5_7125001 chrX_7125001 RAL-805 1887 chrX 7570636 7570663 chrX 7570770 7570797 10 134 1.0 2.5 1.8 3.6 161 chrX 7570636 intergenic not near genes chrX 7570716 intergenic not near genes chrX 7570797 intergenic not near genes chrX_10_7570001 chrX_7570001 RAL-805 1888 chrX 7702907 7702932 chrX 7703346 7703371 jockey 13 439 2.0 5.5 3.8 2.7 464 chrX 7702907 intron CHES-1-like - chrX 7703139 intron CHES-1-like - chrX 7703371 intron CHES-1-like - chrX_13_7700001 chrX_7700001 RAL-805 1889 chrX 7960890 7960897 chrX 7960979 7960986 4 89 3.5 5.5 4.5 0.7 96 chrX 7960890 intron,5` UTR sws -,CR45620 + chrX 7960938 intron sws - chrX 7960986 intron sws - chrX_4_7960001 chrX_7960001 RAL-805 1890 chrX 7995176 7995203 chrX 7995253 7995280 4 77 1.0 2.0 1.5 1.6 104 chrX 7995176 intergenic not near genes chrX 7995228 intergenic Tbh + chrX 7995280 intergenic Tbh + chrX_4_7995001 chrX_7995001 RAL-805 1891 chrX 8085573 8085602 chrX 8085659 8085688 5 86 1.5 2.5 2.0 1.7 115 chrX 8085573 intron,5` UTR CG2256 -,CR45535 + chrX 8085630 intron,5` UTR CG2256 -,CR45535 + chrX 8085688 intron,5` UTR CG2256 -,CR45535 + chrX_5_8085001 chrX_8085001 RAL-805 1892 chrX 8421462 8421491 chrX 8421552 8421583 10 88 2.0 4.0 3.0 2.5 121 chrX 8421462 intron Trf2 + chrX 8421522 intron Trf2 + chrX 8421583 intron Trf2 + chrX_10_8420001 chrX_8420001 RAL-805 1893 chrX 8513092 8513118 chrX 8513359 8513384 10 267 0.5 1.5 1.0 5.0 292 chrX 8513092 intron CG33181 + chrX 8513238 intron CG33181 + chrX 8513384 intron CG33181 + chrX_10_8510001 chrX_8510001 RAL-805 1894 chrX 8730450 8730467 chrX 8730526 8730543 4 76 0.0 6.5 3.2 1.0 93 chrX 8730450 intergenic not near genes chrX 8730496 intergenic not near genes chrX 8730543 intergenic not near genes chrX_4_8730001 chrX_8730001 RAL-805 1895 chrX 8860778 8860791 chrX 8860860 8860875 5 83 0.0 2.0 1.0 2.5 97 chrX 8860778 intron CG12075 + chrX 8860826 intron CG12075 + chrX 8860875 intron CG12075 + chrX_5_8860001 chrX_8860001 RAL-805 1896 chrX 8922333 8922360 chrX 8922759 8922794 jockey 8 432 1.0 1.5 1.2 3.6 461 chrX 8922333 intron rdgA + chrX 8922564 intron rdgA + chrX 8922794 intron rdgA + chrX_8_8920001 chrX_8920001 RAL-805 1897 chrX 8948758 8948782 chrX 8956268 8956292 roo 5 7510 1.0 4.5 2.8 1.3 7534 chrX 8948758 intron rdgA + chrX 8952525 intron rdgA + chrX 8956292 intron rdgA + chrX_5_8950001 chrX_8950001 RAL-805 1898 chrX 9229910 9229922 chrX 9229990 9230001 5 78 3.5 3.0 3.2 1.2 91 chrX 9229910 intron CG12121 - chrX 9229956 intron CG12121 - chrX 9230001 intron CG12121 - chrX_5_9225001 chrX_9225001 RAL-805 1899 chrX 9469505 9469531 chrX 9469761 9469785 5 255 1.5 3.5 2.5 1.4 280 chrX 9469505 intron mgl - chrX 9469645 intron mgl - chrX 9469785 intron mgl - chrX_5_9465001 chrX_9465001 RAL-805 1900 chrX 9508136 9508167 chrX 9509653 9509685 jockey 9 1518 2.0 0.5 1.2 4.1 1549 chrX 9508136 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509685 intron CG32700 - chrX_9_9505001 chrX_9505001 RAL-805 1901 chrX 9575798 9575822 chrX 9576113 9576144 mdg3 7 321 4.0 4.0 4.0 1.4 346 chrX 9575798 intron,exon CG32699 -,CG42395 - chrX 9575971 intron,intron CG32699 -,CG42395 - chrX 9576144 intron,5` UTR CG32699 -,CG42395 - chrX_7_9575001 chrX_9575001 RAL-805 1902 chrX 9599180 9599192 chrX 9599257 9599269 7 77 5.0 4.0 4.5 1.3 89 chrX 9599180 intergenic not near genes chrX 9599224 intergenic not near genes chrX 9599269 intergenic not near genes chrX_7_9595001 chrX_9595001 RAL-805 1903 chrX 9599199 9599202 chrX 9599253 9599274 5 66 2.5 3.0 2.8 1.3 75 chrX 9599199 intergenic not near genes chrX 9599236 intergenic not near genes chrX 9599274 intergenic not near genes chrX_5_9595001 chrX_9595001 RAL-805 1904 chrX 9736528 9736543 chrX 9736751 9736763 6 222 2.0 1.0 1.5 2.4 235 chrX 9736528 intron Sp1 + chrX 9736646 intron Sp1 + chrX 9736763 intron Sp1 + chrX_6_9735001 chrX_9735001 RAL-805 1905 chrX 10106691 10106703 chrX 10106771 10106783 5 80 2.5 0.5 1.5 2.0 92 chrX 10106691 intron RhoU + chrX 10106737 intron RhoU + chrX 10106783 intron RhoU + chrX_5_10105001 chrX_10105001 RAL-805 1906 chrX 10317555 10317575 chrX 10317633 10317653 5 77 0.0 0.0 0.0 5.0 98 chrX 10317555 intron alpha-Man-I - chrX 10317604 intron alpha-Man-I - chrX 10317653 intron alpha-Man-I - chrX_5_10315001 chrX_10315001 RAL-805 1907 chrX 10348802 10348826 chrX 10356367 10356391 springer 6 7562 1.5 1.5 1.5 2.4 7589 chrX 10348802 intergenic snoRNA:U3:9B + chrX 10352596 intergenic not near genes chrX 10356391 intergenic l(1)G0289 - chrX_6_10350001 chrX_10350001 RAL-805 1908 chrX 10369109 10369140 chrX 10369276 10369307 14 167 0.0 2.0 1.0 7.0 198 chrX 10369109 intron CG17841 + chrX 10369208 intron CG17841 + chrX 10369307 intron CG17841 + chrX_14_10365001 chrX_10365001 RAL-805 1909 chrX 10510075 10510105 chrX 10510163 10510194 5 88 1.5 3.5 2.5 1.4 119 chrX 10510075 intron spri - chrX 10510134 intron spri - chrX 10510194 intron spri - chrX_5_10510001 chrX_10510001 RAL-805 1910 chrX 10519113 10519145 chrX 10519228 10519247 6 114 1.5 2.5 2.0 2.0 134 chrX 10519113 intron spri - chrX 10519180 intron spri - chrX 10519247 intron spri - chrX_6_10515001 chrX_10515001 RAL-805 1911 chrX 10550868 10550888 chrX 10552335 10552354 hobo 4 1467 5.5 3.5 4.5 0.7 1486 chrX 10550868 intron spri - chrX 10551611 intron spri - chrX 10552354 intron spri - chrX_4_10550001 chrX_10550001 RAL-805 1912 chrX 10686052 10686079 chrX 10691189 10691216 roo 4 5137 2.5 2.0 2.2 1.2 5164 chrX 10686052 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691216 intron X11Lbeta + chrX_4_10685001 chrX_10685001 RAL-805 1913 chrX 10694157 10694185 chrX 10694237 10694265 8 77 1.5 5.0 3.2 1.9 108 chrX 10694157 intron X11Lbeta + chrX 10694211 intron X11Lbeta + chrX 10694265 intron X11Lbeta + chrX_8_10690001 chrX_10690001 RAL-805 1914 chrX 10759177 10759194 chrX 10759354 10759368 5 176 1.0 1.5 1.2 2.3 191 chrX 10759177 intergenic not near genes chrX 10759272 intergenic not near genes chrX 10759368 intergenic not near genes chrX_5_10755001 chrX_10755001 RAL-805 1915 chrX 10803044 10803048 chrX 10803119 10803133 5 83 5.0 5.0 5.0 0.8 89 chrX 10803044 intron Imp - chrX 10803088 intron Imp - chrX 10803133 intron Imp - chrX_5_10800001 chrX_10800001 RAL-805 1916 chrX 10966263 10966286 chrX 10969741 10969754 9 3469 27.0 16.5 21.8 0.4 3491 chrX 10966263 exon C901 - chrX 10968008 3` UTR CG42339 - chrX 10969754 intron CG42339 - chrX_9_10965001 chrX_10965001 RAL-805 1917 chrX 11044049 11044054 chrX 11044164 11044169 4 115 1.5 2.5 2.0 1.3 120 chrX 11044049 intergenic not near genes chrX 11044109 intergenic not near genes chrX 11044169 intergenic not near genes chrX_4_11040001 chrX_11040001 RAL-805 1918 chrX 11069164 11069190 chrX 11069307 11069333 7 141 2.0 3.0 2.5 2.0 169 chrX 11069164 intergenic not near genes chrX 11069248 intergenic not near genes chrX 11069333 intergenic not near genes chrX_7_11065001 chrX_11065001 RAL-805 1919 chrX 11141987 11142068 chrX 11142063 11142144 5 76 0.0 0.0 0.0 5.0 157 chrX 11141987 intergenic CG15199 - chrX 11142066 intergenic CG15199 -,CG15202 + chrX 11142144 intergenic CG15199 -,CG15202 + chrX_5_11140001 chrX_11140001 RAL-805 1920 chrX 11194453 11194462 chrX 11201874 11201880 gypsy5 7 7420 2.5 4.0 3.2 1.7 7427 chrX 11194453 intergenic not near genes chrX 11198166 intergenic not near genes chrX 11201880 intergenic CG11106 + chrX_7_11195001 chrX_11195001 RAL-805 1921 chrX 11254174 11254200 chrX 11254285 11254311 6 111 4.0 3.0 3.5 1.3 137 chrX 11254174 intron CG44422 - chrX 11254242 intron CG44422 - chrX 11254311 intron CG44422 - chrX_6_11250001 chrX_11250001 RAL-805 1922 chrX 11312061 11312093 chrX 11319413 11319434 Stalker2 10 7351 3.0 2.5 2.8 2.6 7373 chrX 11312061 intergenic not near genes chrX 11315748 intergenic not near genes chrX 11319434 intergenic not near genes chrX_10_11315001 chrX_11315001 RAL-805 1923 chrX 11379771 11379787 chrX 11379916 11379932 5 145 2.5 2.5 2.5 1.4 161 chrX 11379771 intron dlg1 + chrX 11379852 intron dlg1 + chrX 11379932 intron dlg1 + chrX_5_11375001 chrX_11375001 RAL-805 1924 chrX 11441434 11441465 chrX 11441557 11441589 7 123 2.0 5.0 3.5 1.6 155 chrX 11441434 intron Evi5 - chrX 11441512 intron Evi5 - chrX 11441589 intron Evi5 - chrX_7_11440001 chrX_11440001 RAL-805 1925 chrX 11528611 11528646 chrX 11528922 11528956 9 311 1.0 4.5 2.8 2.4 345 chrX 11528611 intron Drak + chrX 11528784 intron Drak + chrX 11528956 intron Drak + chrX_9_11525001 chrX_11525001 RAL-805 1926 chrX 11633417 11633449 chrX 11640470 11640503 297 6 7054 2.0 1.0 1.5 2.4 7086 chrX 11633417 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640503 intron Ptp10D + chrX_6_11635001 chrX_11635001 RAL-805 1927 chrX 11719548 11719576 chrX 11719654 11719682 8 106 2.5 2.0 2.2 2.5 134 chrX 11719548 3` UTR prtp + chrX 11719615 3` UTR prtp + chrX 11719682 3` UTR prtp + chrX_8_11715001 chrX_11715001 RAL-805 1928 chrX 11922365 11922383 chrX 11922498 11922514 11 132 1.0 3.0 2.0 3.7 149 chrX 11922365 exon Sclp - chrX 11922440 intron Sclp - chrX 11922514 intron Sclp - chrX_11_11920001 chrX_11920001 RAL-805 1929 chrX 12168148 12168166 chrX 12173589 12173607 I-element 5 5440 1.0 1.5 1.2 2.3 5459 chrX 12168148 intron Ten-a + chrX 12170878 intron Ten-a + chrX 12173607 intron Ten-a + chrX_5_12170001 chrX_12170001 RAL-805 1930 chrX 12176741 12176766 chrX 12176813 12176840 12 73 4.0 4.0 4.0 2.4 99 chrX 12176741 intron,3` UTR Ten-a +,CG1924 - chrX 12176790 intron,3` UTR Ten-a +,CG1924 - chrX 12176840 intron,3` UTR Ten-a +,CG1924 - chrX_12_12175001 chrX_12175001 RAL-805 1931 chrX 12248750 12248771 chrX 12248842 12248861 4 92 2.5 2.0 2.2 1.2 111 chrX 12248750 intron Ten-a + chrX 12248806 intron Ten-a + chrX 12248861 intron Ten-a + chrX_4_12245001 chrX_12245001 RAL-805 1932 chrX 12272843 12272869 chrX 12272922 12272948 8 79 1.0 2.5 1.8 2.9 105 chrX 12272843 intron Ten-a + chrX 12272896 intron Ten-a + chrX 12272948 intron Ten-a + chrX_8_12270001 chrX_12270001 RAL-805 1933 chrX 12277182 12277197 chrX 12277273 12277288 7 91 3.0 1.5 2.2 2.2 106 chrX 12277182 intron Ten-a + chrX 12277235 intron Ten-a + chrX 12277288 intron Ten-a + chrX_7_12275001 chrX_12275001 RAL-805 1934 chrX 12301966 12301987 chrX 12303271 12303276 X-element 9 1303 0.5 3.0 1.8 3.2 1310 chrX 12301966 intron Ten-a + chrX 12302621 intron Ten-a + chrX 12303276 intron Ten-a + chrX_9_12300001 chrX_12300001 RAL-805 1935 chrX 12785099 12785129 chrX 12785182 12785211 10 82 2.5 2.5 2.5 2.9 112 chrX 12785099 intergenic CG32647 -,Pde9 - chrX 12785155 intergenic CG32647 -,Pde9 - chrX 12785211 intergenic CG32647 -,Pde9 - chrX_10_12785001 chrX_12785001 RAL-805 1936 chrX 12785426 12785457 chrX 12785503 12785534 6 77 0.5 3.5 2.0 2.0 108 chrX 12785426 intergenic Pde9 -,CG32647 - chrX 12785480 intergenic Pde9 - chrX 12785534 intergenic Pde9 - chrX_6_12785001 chrX_12785001 RAL-805 1937 chrX 12858632 12858663 chrX 12858725 12858752 6 92 1.5 1.0 1.2 2.7 120 chrX 12858632 intron Pde9 - chrX 12858692 intron Pde9 - chrX 12858752 intron Pde9 - chrX_6_12855001 chrX_12855001 RAL-805 1938 chrX 13146595 13146628 chrX 13146683 13146716 9 88 3.0 1.5 2.2 2.8 121 chrX 13146595 intron CG32645 + chrX 13146656 intron CG32645 + chrX 13146716 intron CG32645 + chrX_9_13145001 chrX_13145001 RAL-805 1939 chrX 13147566 13147591 chrX 13147648 13147666 14 81 4.0 2.5 3.2 3.3 100 chrX 13147566 intron CG32645 + chrX 13147616 intron CG32645 + chrX 13147666 intron CG32645 + chrX_14_13145001 chrX_13145001 RAL-805 1940 chrX 13369670 13369698 chrX 13369833 13369862 7 160 4.5 5.0 4.8 1.2 192 chrX 13369670 intron dmrt11E + chrX 13369766 intron dmrt11E + chrX 13369862 intron dmrt11E + chrX_7_13365001 chrX_13365001 RAL-805 1941 chrX 13403024 13403043 chrX 13403151 13403170 X-element 7 127 2.5 3.5 3.0 1.8 146 chrX 13403024 intergenic CG12725 - chrX 13403097 intergenic CG12725 - chrX 13403170 intergenic CG12725 - chrX_7_13400001 chrX_13400001 RAL-805 1942 chrX 13429461 13429496 chrX 13430610 13430645 jockey 10 1149 6.5 3.5 5.0 1.7 1184 chrX 13429461 intergenic not near genes chrX 13430053 intergenic not near genes chrX 13430645 intergenic not near genes chrX_10_13430001 chrX_13430001 RAL-805 1943 chrX 13454278 13454312 chrX 13454433 13454467 10 151 0.0 2.0 1.0 5.0 189 chrX 13454278 intron Neto + chrX 13454372 intron Neto + chrX 13454467 intron Neto + chrX_10_13450001 chrX_13450001 RAL-805 1944 chrX 13788715 13788747 chrX 13789086 13789118 7 370 1.5 4.5 3.0 1.8 403 chrX 13788715 intron inaE + chrX 13788916 intron inaE + chrX 13789118 intron inaE + chrX_7_13785001 chrX_13785001 RAL-805 1945 chrX 13915431 13915456 chrX 13915563 13915588 6 132 1.5 0.0 0.8 3.3 157 chrX 13915431 intron mamo - chrX 13915510 intron mamo - chrX 13915588 intron mamo - chrX_6_13915001 chrX_13915001 RAL-805 1946 chrX 13934294 13934322 chrX 13934377 13934405 4 83 0.0 3.5 1.8 1.4 111 chrX 13934294 intron mamo - chrX 13934350 intron mamo - chrX 13934405 intron mamo - chrX_4_13930001 chrX_13930001 RAL-805 1947 chrX 13937977 13938006 chrX 13941248 13941275 I-element 6 3269 1.0 2.5 1.8 2.1 3298 chrX 13937977 intron mamo - chrX 13939626 intron mamo - chrX 13941275 intron mamo - chrX_6_13935001 chrX_13935001 RAL-805 1948 chrX 14105037 14105049 chrX 14114180 14114200 roo 4 9146 2.5 5.5 4.0 0.8 9163 chrX 14105037 intergenic not near genes chrX 14109618 intergenic not near genes chrX 14114200 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-805 1949 chrX 14131496 14131503 chrX 14131577 14131582 4 80 2.0 2.0 2.0 1.3 86 chrX 14131496 intergenic not near genes chrX 14131539 intergenic not near genes chrX 14131582 intergenic not near genes chrX_4_14130001 chrX_14130001 RAL-805 1950 chrX 14131505 14131521 chrX 14131568 14131600 5 74 2.0 1.5 1.8 1.8 95 chrX 14131505 intergenic not near genes chrX 14131552 intergenic not near genes chrX 14131600 intergenic not near genes chrX_5_14130001 chrX_14130001 RAL-805 1951 chrX 14157592 14157613 chrX 14163249 14163270 297 7 5657 1.5 1.0 1.2 3.2 5678 chrX 14157592 intergenic not near genes chrX 14160431 intergenic not near genes chrX 14163270 intergenic not near genes chrX_7_14160001 chrX_14160001 RAL-805 1952 chrX 14189882 14189889 chrX 14189975 14189984 4 94 1.0 1.5 1.2 1.8 102 chrX 14189882 exon CG11585 + chrX 14189933 exon CG11585 + chrX 14189984 exon CG11585 + chrX_4_14185001 chrX_14185001 RAL-805 1953 chrX 14209463 14209480 chrX 14209554 14209571 6 91 1.5 2.0 1.8 2.1 108 chrX 14209463 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209517 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209571 intron,intron l(1)G0007 +,l(1)G0469 - chrX_6_14205001 chrX_14205001 RAL-805 1954 chrX 14337721 14337751 chrX 14337831 14337861 7 110 1.5 1.0 1.2 3.2 140 chrX 14337721 intron dpr8 + chrX 14337791 intron dpr8 + chrX 14337861 intron dpr8 + chrX_7_14335001 chrX_14335001 RAL-805 1955 chrX 14570081 14570106 chrX 14570163 14570187 5 82 1.0 0.5 0.8 2.8 106 chrX 14570081 intergenic not near genes chrX 14570134 intergenic not near genes chrX 14570187 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-805 1956 chrX 14572881 14572910 chrX 14572968 14572998 7 87 2.5 1.5 2.0 2.3 117 chrX 14572881 intergenic not near genes chrX 14572940 intergenic not near genes chrX 14572998 intergenic not near genes chrX_7_14570001 chrX_14570001 RAL-805 1957 chrX 14636460 14636485 chrX 14641901 14641926 I-element 10 5438 3.0 2.0 2.5 2.9 5466 chrX 14636460 intron NetA - chrX 14639193 intron NetA - chrX 14641926 intron NetA - chrX_10_14635001 chrX_14635001 RAL-805 1958 chrX 14714043 14714062 chrX 14714125 14714144 4 82 0.5 1.5 1.0 2.0 101 chrX 14714043 intron NetB - chrX 14714094 intron NetB - chrX 14714144 intron NetB - chrX_4_14710001 chrX_14710001 RAL-805 1959 chrX 14778028 14778055 chrX 14782825 14782852 Doc 6 4797 3.0 1.5 2.2 1.9 4824 chrX 14778028 intergenic CG5347 + chrX 14780440 intergenic not near genes chrX 14782852 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-805 1960 chrX 14936857 14936892 chrX 14946114 14946149 roo 7 9257 1.5 1.0 1.2 3.2 9292 chrX 14936857 intron pdgy - chrX 14941503 intron pdgy - chrX 14946149 intron pdgy - chrX_7_14940001 chrX_14940001 RAL-805 1961 chrX 14968083 14968098 chrX 14968162 14968177 4 79 2.5 2.5 2.5 1.1 94 chrX 14968083 intron eag + chrX 14968130 intron eag + chrX 14968177 intron eag + chrX_4_14965001 chrX_14965001 RAL-805 1962 chrX 14981706 14981739 chrX 14981784 14981818 7 79 1.0 0.0 0.5 4.7 112 chrX 14981706 intron eag + chrX 14981762 intron eag + chrX 14981818 intron eag + chrX_7_14980001 chrX_14980001 RAL-805 1963 chrX 15234369 15234397 chrX 15234452 15234480 7 83 2.0 2.0 2.0 2.3 111 chrX 15234369 intergenic not near genes chrX 15234424 intergenic not near genes chrX 15234480 intergenic not near genes chrX_7_15230001 chrX_15230001 RAL-805 1964 chrX 15413051 15413087 chrX 15417353 15417389 Juan 12 4300 4.0 1.5 2.8 3.2 4338 chrX 15413051 intron Cngl - chrX 15415220 intron Cngl - chrX 15417389 intron Cngl - chrX_12_15415001 chrX_15415001 RAL-805 1965 chrX 15492505 15492534 chrX 15492596 15492609 9 89 1.5 3.0 2.2 2.8 104 chrX 15492505 intron Gmap + chrX 15492557 intron Gmap + chrX 15492609 intron Gmap + chrX_9_15490001 chrX_15490001 RAL-805 1966 chrX 15671199 15671208 chrX 15671286 15671294 4 87 3.0 0.0 1.5 1.6 95 chrX 15671199 intergenic CG15646 - chrX 15671246 intergenic CG15646 - chrX 15671294 intergenic CG15646 - chrX_4_15670001 chrX_15670001 RAL-805 1967 chrX 15678041 15678050 chrX 15678118 15678127 4 77 2.0 4.5 3.2 1.0 86 chrX 15678041 intergenic CG12708 + chrX 15678084 intergenic CG12708 + chrX 15678127 intergenic CG12708 + chrX_4_15675001 chrX_15675001 RAL-805 1968 chrX 15898445 15898458 chrX 15898597 15898612 8 154 1.5 3.0 2.2 2.5 167 chrX 15898445 intron shi + chrX 15898528 intron shi + chrX 15898612 intron shi + chrX_8_15895001 chrX_15895001 RAL-805 1969 chrX 16295534 16295545 chrX 16295618 16295629 5 84 1.0 0.0 0.5 3.3 95 chrX 16295534 intron CG9911 - chrX 16295582 intron CG9911 - chrX 16295629 intron CG9911 - chrX_5_16295001 chrX_16295001 RAL-805 1970 chrX 16308930 16308941 chrX 16309012 16309023 5 82 0.0 4.0 2.0 1.7 93 chrX 16308930 intergenic CR45485 +,CG9914 - chrX 16308976 intergenic CR45485 +,CG9914 - chrX 16309023 intergenic CR45485 +,CG9914 - chrX_5_16305001 chrX_16305001 RAL-805 1971 chrX 16355279 16355303 chrX 16355441 16355465 7 162 1.5 0.5 1.0 3.5 186 chrX 16355279 3` UTR sl + chrX 16355372 3` UTR sl + chrX 16355465 3` UTR sl + chrX_7_16355001 chrX_16355001 RAL-805 1972 chrX 16492648 16492677 chrX 16498225 16498254 mdg3 8 5577 4.5 1.5 3.0 2.0 5606 chrX 16492648 intron para - chrX 16495451 intron para - chrX 16498254 intron para - chrX_8_16495001 chrX_16495001 RAL-805 1973 chrX 16570873 16570905 chrX 16570953 16570970 5 77 2.0 2.0 2.0 1.7 97 chrX 16570873 intron CanA-14F - chrX 16570922 intron CanA-14F - chrX 16570970 intron CanA-14F - chrX_5_16570001 chrX_16570001 RAL-805 1974 chrX 16689630 16689654 chrX 16689711 16689740 6 83 1.0 2.0 1.5 2.4 110 chrX 16689630 intron Sep4 - chrX 16689685 intron Sep4 - chrX 16689740 intron Sep4 - chrX_6_16685001 chrX_16685001 RAL-805 1975 chrX 16841415 16841424 chrX 16841483 16841502 7 76 1.0 0.0 0.5 4.7 87 chrX 16841415 exon RSG7 - chrX 16841458 intron RSG7 - chrX 16841502 intron RSG7 - chrX_7_16840001 chrX_16840001 RAL-805 1976 chrX 16897352 16897367 chrX 16897429 16897442 4 76 0.0 1.5 0.8 2.2 90 chrX 16897352 intergenic CG33252 - chrX 16897397 intergenic CG33252 - chrX 16897442 intergenic CG33252 - chrX_4_16895001 chrX_16895001 RAL-805 1977 chrX 17011989 17012000 chrX 17012050 17012082 4 77 2.0 2.0 2.0 1.3 93 chrX 17011989 intron CG45002 - chrX 17012036 intron CG45002 - chrX 17012082 intron CG45002 - chrX_4_17010001 chrX_17010001 RAL-805 1978 chrX 17089597 17089632 chrX 17089723 17089758 7 125 0.5 1.0 0.8 3.9 161 chrX 17089597 intergenic not near genes chrX 17089678 intergenic not near genes chrX 17089758 intergenic not near genes chrX_7_17085001 chrX_17085001 RAL-805 1979 chrX 17195203 17195228 chrX 17200289 17200312 flea 10 5086 4.0 2.0 3.0 2.5 5109 chrX 17195203 3` UTR baz + chrX 17197758 3` UTR baz + chrX 17200312 3` UTR baz + chrX_10_17195001 chrX_17195001 RAL-805 1980 chrX 17352591 17352619 chrX 17352694 17352722 12 102 0.0 3.0 1.5 4.8 131 chrX 17352591 intergenic not near genes chrX 17352656 intergenic not near genes chrX 17352722 intergenic not near genes chrX_12_17350001 chrX_17350001 RAL-805 1981 chrX 17502359 17502372 chrX 17502439 17502452 7 80 1.0 4.0 2.5 2.0 93 chrX 17502359 intron CG43658 - chrX 17502406 intron CG43658 - chrX 17502452 intron CG43658 - chrX_7_17500001 chrX_17500001 RAL-805 1982 chrX 17545015 17545026 chrX 17545097 17545097 5 80 2.5 5.0 3.8 1.0 82 chrX 17545015 intron CG43658 - chrX 17545056 intron CG43658 - chrX 17545097 intron CG43658 - chrX_5_17545001 chrX_17545001 RAL-805 1983 chrX 17766358 17766371 chrX 17766456 17766467 4 98 2.5 1.5 2.0 1.3 109 chrX 17766358 intergenic not near genes chrX 17766412 intergenic not near genes chrX 17766467 intergenic not near genes chrX_4_17765001 chrX_17765001 RAL-805 1984 chrX 17792964 17792972 chrX 17796257 17796268 flea 4 3295 1.0 4.5 2.8 1.1 3304 chrX 17792964 intron OdsH + chrX 17794616 intron OdsH + chrX 17796268 intron OdsH + chrX_4_17790001 chrX_17790001 RAL-805 1985 chrX 18033684 18033698 chrX 18034358 18034373 4 675 1.5 5.5 3.5 0.9 689 chrX 18033684 intron Sh - chrX 18034028 intron Sh - chrX 18034373 intron Sh - chrX_4_18030001 chrX_18030001 RAL-805 1986 chrX 18128216 18128247 chrX 18131049 18131080 8 2835 14.5 17.5 16.0 0.5 2864 chrX 18128216 intergenic mir-210 + chrX 18129648 3` UTR CG43133 - chrX 18131080 3` UTR ari-1 - chrX_8_18125001 chrX_18125001 RAL-805 1987 chrX 18182304 18182332 chrX 18182658 18182676 6 352 1.5 0.5 1.0 3.0 372 chrX 18182304 intron Frq2 + chrX 18182490 intron Frq2 + chrX 18182676 intron Frq2 + chrX_6_18180001 chrX_18180001 RAL-805 1988 chrX 18194065 18194104 chrX 18194600 18194634 BS 11 534 1.5 1.0 1.2 5.0 569 chrX 18194065 intron Frq2 + chrX 18194350 intron Frq2 + chrX 18194634 intron Frq2 + chrX_11_18190001 chrX_18190001 RAL-805 1989 chrX 18427383 18427409 chrX 18427794 18427820 6 411 6.0 2.0 4.0 1.2 437 chrX 18427383 intergenic CG42323 + chrX 18427602 intergenic not near genes chrX 18427820 intergenic not near genes chrX_6_18425001 chrX_18425001 RAL-805 1990 chrX 18562369 18562395 chrX 18562444 18562471 8 75 2.5 0.5 1.5 3.2 102 chrX 18562369 intron Bx + chrX 18562420 intron Bx + chrX 18562471 intron Bx + chrX_8_18560001 chrX_18560001 RAL-805 1991 chrX 18645012 18645045 chrX 18645110 18645143 9 98 2.5 1.5 2.0 3.0 131 chrX 18645012 intron Rip11 - chrX 18645078 intron Rip11 - chrX 18645143 intron Rip11 - chrX_9_18645001 chrX_18645001 RAL-805 1992 chrX 18774452 18774470 chrX 18774537 18774555 8 85 4.0 0.5 2.2 2.5 103 chrX 18774452 intergenic CCKLR-17D3 - chrX 18774504 intergenic CCKLR-17D3 - chrX 18774555 intergenic not near genes chrX_8_18770001 chrX_18770001 RAL-805 1993 chrX 18896517 18896527 chrX 18896628 18896637 4 111 3.5 0.5 2.0 1.3 120 chrX 18896517 3` UTR CG7349 + chrX 18896577 3` UTR CG7349 + chrX 18896637 intergenic CG7349 + chrX_4_18895001 chrX_18895001 RAL-805 1994 chrX 18896912 18896917 chrX 18896989 18896994 4 77 3.0 4.0 3.5 0.9 82 chrX 18896912 intergenic CG7349 + chrX 18896953 intergenic CG7349 + chrX 18896994 intergenic CG7349 + chrX_4_18895001 chrX_18895001 RAL-805 1995 chrX 18896919 18896941 chrX 18896987 18897015 12 76 1.5 4.0 2.8 3.2 96 chrX 18896919 intergenic CG7349 + chrX 18896967 intergenic CG7349 + chrX 18897015 intergenic CG7349 + chrX_12_18895001 chrX_18895001 RAL-805 1996 chrX 19014363 19014390 chrX 19014441 19014469 8 78 3.5 1.0 2.2 2.5 106 chrX 19014363 intron CG43759 + chrX 19014416 intron CG43759 + chrX 19014469 intron CG43759 + chrX_8_19010001 chrX_19010001 RAL-805 1997 chrX 19020588 19020615 chrX 19020666 19020693 6 78 2.5 2.0 2.2 1.9 105 chrX 19020588 intron CG43759 + chrX 19020640 intron CG43759 + chrX 19020693 intron CG43759 + chrX_6_19020001 chrX_19020001 RAL-805 1998 chrX 19060411 19060438 chrX 19065195 19065222 Doc 10 4784 2.0 1.5 1.8 3.6 4811 chrX 19060411 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065222 intron CG14190 + chrX_10_19060001 chrX_19060001 RAL-805 1999 chrX 19084104 19084122 chrX 19084224 19084242 7 120 0.5 0.5 0.5 4.7 138 chrX 19084104 intergenic CR45503 + chrX 19084173 intergenic CR45503 + chrX 19084242 intergenic CR45503 + chrX_7_19080001 chrX_19080001 RAL-805 2000 chrX 19098775 19098781 chrX 19098853 19098859 4 78 1.5 4.0 2.8 1.1 84 chrX 19098775 intergenic not near genes chrX 19098817 intergenic not near genes chrX 19098859 intergenic not near genes chrX_4_19095001 chrX_19095001 RAL-805 2001 chrX 19099660 19099676 chrX 19099743 19099757 4 81 4.0 2.5 3.2 1.0 97 chrX 19099660 intergenic not near genes chrX 19099708 intergenic not near genes chrX 19099757 intergenic not near genes chrX_4_19095001 chrX_19095001 RAL-805 2002 chrX 19124441 19124458 chrX 19124529 19124546 5 85 1.0 0.0 0.5 3.3 105 chrX 19124441 intergenic CG15882 - chrX 19124494 intergenic CG15882 - chrX 19124546 intergenic CG15882 -,tgy - chrX_5_19120001 chrX_19120001 RAL-805 2003 chrX 19125690 19125721 chrX 19125819 19125850 8 128 1.0 3.0 2.0 2.7 160 chrX 19125690 intron tgy - chrX 19125770 intron tgy - chrX 19125850 intron tgy - chrX_8_19125001 chrX_19125001 RAL-805 2004 chrX 19136563 19136585 chrX 19143483 19143504 412 4 6917 1.5 2.5 2.0 1.3 6941 chrX 19136563 intergenic not near genes chrX 19140034 intergenic not near genes chrX 19143504 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-805 2005 chrX 19147649 19147661 chrX 19147820 19147833 6 172 1.0 3.0 2.0 2.0 184 chrX 19147649 intron RhoGAP18B - chrX 19147741 intron RhoGAP18B - chrX 19147833 intron RhoGAP18B - chrX_6_19145001 chrX_19145001 RAL-805 2006 chrX 19176218 19176239 chrX 19176302 19176323 6 83 3.0 4.5 3.8 1.2 105 chrX 19176218 3` UTR CG7556 - chrX 19176270 3` UTR CG7556 - chrX 19176323 3` UTR CG7556 - chrX_6_19175001 chrX_19175001 RAL-805 2007 chrX 19240219 19240242 chrX 19240305 19240328 9 85 1.5 1.5 1.5 3.6 109 chrX 19240219 intron CG14196 - chrX 19240274 intron CG14196 - chrX 19240328 intron CG14196 - chrX_9_19240001 chrX_19240001 RAL-805 2008 chrX 13057298 13057300 chrX 19242812 19242814 22 6185514 6.0 0.0 3.0 5.5 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_22_16150001 chrX_16150001 RAL-805 2009 chrX 19256654 19256675 chrX 19256733 19256754 8 79 5.5 2.5 4.0 1.6 100 chrX 19256654 intron rictor - chrX 19256704 intron rictor - chrX 19256754 intron rictor - chrX_8_19255001 chrX_19255001 RAL-805 2010 chrX 19292356 19292387 chrX 19292449 19292480 8 93 2.0 2.5 2.2 2.5 124 chrX 19292356 intron CG8034 - chrX 19292418 intron CG8034 - chrX 19292480 intron CG8034 - chrX_8_19290001 chrX_19290001 RAL-805 2011 chrX 19315758 19315784 chrX 19315858 19315885 6 100 0.5 1.5 1.0 3.0 127 chrX 19315758 intron out - chrX 19315822 intron out - chrX 19315885 intron out - chrX_6_19315001 chrX_19315001 RAL-805 2012 chrX 19357000 19357008 chrX 19358441 19358449 NOF 5 1441 2.0 0.5 1.2 2.3 1449 chrX 19357000 intron kek5 + chrX 19357724 intron kek5 + chrX 19358449 intron kek5 + chrX_5_19355001 chrX_19355001 RAL-805 2013 chrX 19380166 19380183 chrX 19380407 19380424 pogo 4 241 3.5 1.0 2.2 1.2 258 chrX 19380166 intron kek5 + chrX 19380295 intron kek5 + chrX 19380424 intron kek5 + chrX_4_19380001 chrX_19380001 RAL-805 2014 chrX 19472134 19472154 chrX 19472696 19472721 jockey 8 566 1.5 3.5 2.5 2.3 587 chrX 19472134 intergenic kek5 + chrX 19472428 intergenic not near genes chrX 19472721 intergenic not near genes chrX_8_19470001 chrX_19470001 RAL-805 2015 chrX 19593954 19593973 chrX 19594037 19594058 8 85 2.5 5.5 4.0 1.6 104 chrX 19593954 exon CG14205 + chrX 19594006 intron CG14205 + chrX 19594058 intron CG14205 + chrX_8_19590001 chrX_19590001 RAL-805 2016 chrX 19710072 19710093 chrX 19711857 19711878 S-element 4 1786 2.5 1.0 1.8 1.4 1806 chrX 19710072 intron meso18E - chrX 19710975 intron meso18E - chrX 19711878 intron meso18E - chrX_4_19710001 chrX_19710001 RAL-805 2017 chrX 19756137 19756152 chrX 19756224 19756238 5 87 2.5 1.0 1.8 1.8 101 chrX 19756137 intron Pmp70 + chrX 19756188 intron Pmp70 + chrX 19756238 intron Pmp70 + chrX_5_19755001 chrX_19755001 RAL-805 2018 chrX 19822827 19822854 chrX 19822994 19823021 12 166 1.0 1.0 1.0 6.0 194 chrX 19822827 intergenic not near genes chrX 19822924 intergenic skpE - chrX 19823021 intergenic skpE - chrX_12_19820001 chrX_19820001 RAL-805 2019 chrX 19880388 19880394 chrX 19880507 19880513 4 119 2.0 1.5 1.8 1.4 125 chrX 19880388 intron Hers + chrX 19880450 intron Hers + chrX 19880513 intron Hers + chrX_4_19880001 chrX_19880001 RAL-805 2020 chrX 19881455 19881484 chrX 19881535 19881563 4 76 0.0 0.0 0.0 4.0 108 chrX 19881455 intron Hers + chrX 19881509 intron Hers + chrX 19881563 intron Hers + chrX_4_19880001 chrX_19880001 RAL-805 2021 chrX 19983866 19983893 chrX 19983946 19983973 5 80 0.5 2.5 1.5 2.0 107 chrX 19983866 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983973 intergenic not near genes chrX_5_19980001 chrX_19980001 RAL-805 2022 chrX 20082750 20082781 chrX 20082833 20082864 6 83 2.0 0.5 1.2 2.7 114 chrX 20082750 intergenic not near genes chrX 20082807 intergenic not near genes chrX 20082864 intergenic not near genes chrX_6_20080001 chrX_20080001 RAL-805 2023 chrX 20105198 20105219 chrX 20105305 20105323 4 104 20.0 21.0 20.5 0.2 125 chrX 20105198 intergenic not near genes chrX 20105260 intergenic not near genes chrX 20105323 intergenic not near genes chrX_4_20105001 chrX_20105001 RAL-805 2024 chrX 20271510 20271527 chrX 20271602 20271618 5 92 0.0 0.0 0.0 5.0 108 chrX 20271510 intergenic not near genes chrX 20271564 intergenic not near genes chrX 20271618 intergenic not near genes chrX_5_20270001 chrX_20270001 RAL-805 2025 chrX 20312882 20312901 chrX 20312959 20312979 6 78 4.0 2.5 3.2 1.4 97 chrX 20312882 intron CG1504 - chrX 20312930 intron CG1504 - chrX 20312979 intron CG1504 - chrX_6_20310001 chrX_20310001 RAL-805 2026 chrX 20359154 20359171 chrX 20359232 20359249 5 78 2.5 5.5 4.0 1.0 95 chrX 20359154 intergenic not near genes chrX 20359202 intergenic not near genes chrX 20359249 intergenic not near genes chrX_5_20355001 chrX_20355001 RAL-805 2027 chrX 20369319 20369333 chrX 20369403 20369417 5 84 2.0 4.5 3.2 1.2 98 chrX 20369319 intergenic not near genes chrX 20369368 intergenic not near genes chrX 20369417 intergenic not near genes chrX_5_20365001 chrX_20365001 RAL-805 2028 chrX 20369339 20369340 chrX 20369423 20369424 4 84 1.5 6.5 4.0 0.8 85 chrX 20369339 intergenic not near genes chrX 20369382 intergenic not near genes chrX 20369424 intergenic not near genes chrX_4_20365001 chrX_20365001 RAL-805 2029 chrX 20374111 20374125 chrX 20374187 20374201 5 75 1.5 2.0 1.8 1.8 90 chrX 20374111 intergenic not near genes chrX 20374156 intergenic not near genes chrX 20374201 intergenic not near genes chrX_5_20370001 chrX_20370001 RAL-805 2030 chrX 20377330 20377349 chrX 20378797 20378816 hobo 6 1467 3.0 4.0 3.5 1.3 1486 chrX 20377330 intergenic not near genes chrX 20378073 intergenic not near genes chrX 20378816 intergenic not near genes chrX_6_20375001 chrX_20375001 RAL-805 2031 chrX 20443179 20443192 chrX 20443254 20443268 4 76 3.5 2.0 2.8 1.1 89 chrX 20443179 intron CG1695 + chrX 20443224 intron CG1695 + chrX 20443268 intron CG1695 + chrX_4_20440001 chrX_20440001 RAL-805 2032 chrX 20468018 20468041 chrX 20468107 20468130 5 86 0.5 0.0 0.2 4.2 112 chrX 20468018 intron GstT3 + chrX 20468074 intron GstT3 + chrX 20468130 intron GstT3 + chrX_5_20465001 chrX_20465001 RAL-805 2033 chrX 20504128 20504154 chrX 20505649 20505675 transib2 9 1520 3.5 4.5 4.0 1.8 1547 chrX 20504128 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505675 intron RhoGAP19D - chrX_9_20500001 chrX_20500001 RAL-805 2034 chrX 20528602 20528614 chrX 20528950 20528962 6 348 1.5 3.0 2.2 1.9 360 chrX 20528602 intergenic not near genes chrX 20528782 intergenic not near genes chrX 20528962 intergenic not near genes chrX_6_20525001 chrX_20525001 RAL-805 2035 chrX 20531761 20531792 chrX 20531860 20531891 5 99 1.5 1.5 1.5 2.0 130 chrX 20531761 intergenic not near genes chrX 20531826 intergenic not near genes chrX 20531891 intergenic not near genes chrX_5_20530001 chrX_20530001 RAL-805 2036 chrX 20546555 20546568 chrX 20546721 20546734 4 166 1.5 1.0 1.2 1.8 179 chrX 20546555 intron RunxB + chrX 20546644 intron RunxB + chrX 20546734 intron RunxB + chrX_4_20545001 chrX_20545001 RAL-805 2037 chrX 20583728 20583752 chrX 20583895 20583922 6 170 1.5 0.0 0.8 3.3 194 chrX 20583728 intergenic not near genes chrX 20583825 intergenic not near genes chrX 20583922 intergenic not near genes chrX_6_20580001 chrX_20580001 RAL-805 2038 chrX 20836732 20836759 chrX 20844332 20844361 roo 4 7602 1.0 1.5 1.2 1.8 7629 chrX 20836732 intron shakB - chrX 20840546 intron shakB - chrX 20844361 intron shakB - chrX_4_20840001 chrX_20840001 RAL-805 2039 chrX 20915060 20915071 chrX 20915231 20915242 4 170 3.0 1.0 2.0 1.3 182 chrX 20915060 intron shakB - chrX 20915151 intron shakB - chrX 20915242 intron shakB - chrX_4_20915001 chrX_20915001 RAL-805 2040 chrX 20940721 20940750 chrX 20942190 20942217 hobo 13 1469 4.5 3.5 4.0 2.6 1496 chrX 20940721 intergenic not near genes chrX 20941469 intergenic not near genes chrX 20942217 intergenic not near genes chrX_13_20940001 chrX_20940001 RAL-805 2041 chrX 20981024 20981054 chrX 20981127 20981157 7 103 0.5 1.5 1.0 3.5 133 chrX 20981024 intergenic not near genes chrX 20981090 intergenic not near genes chrX 20981157 intergenic not near genes chrX_7_20980001 chrX_20980001 RAL-805 2042 chrX 21061882 21061894 chrX 21062368 21062380 roo 5 486 0.5 2.0 1.2 2.3 498 chrX 21061882 intron bves + chrX 21062131 intron bves + chrX 21062380 intron,3` UTR bves +,CG32512 - chrX_5_21060001 chrX_21060001 RAL-805 2043 chrX 21086128 21086152 chrX 21087157 21087178 jockey 8 1028 5.0 1.5 3.2 1.9 1050 chrX 21086128 intergenic not near genes chrX 21086653 intergenic not near genes chrX 21087178 intergenic not near genes chrX_8_21085001 chrX_21085001 RAL-805 2044 chrX 21088042 21088071 chrX 21088174 21088189 6 129 1.0 2.0 1.5 2.4 147 chrX 21088042 intergenic not near genes chrX 21088116 intergenic not near genes chrX 21088189 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-805 2045 chrX 21188607 21188642 chrX 21188683 21188718 7 74 3.0 1.5 2.2 2.2 111 chrX 21188607 5` UTR CR45506 + chrX 21188662 5` UTR CR45506 + chrX 21188718 5` UTR CR45506 + chrX_7_21185001 chrX_21185001 RAL-805 2046 chrX 21197057 21197079 chrX 21197135 21197157 6 76 2.5 1.0 1.8 2.1 100 chrX 21197057 intergenic not near genes chrX 21197107 intergenic not near genes chrX 21197157 intergenic not near genes chrX_6_21195001 chrX_21195001 RAL-805 2047 chrX 21197080 21197089 chrX 21197134 21197143 4 66 1.5 1.0 1.2 1.8 63 chrX 21197080 intergenic not near genes chrX 21197112 intergenic not near genes chrX 21197143 intergenic not near genes chrX_4_21195001 chrX_21195001 RAL-805 2048 chrX 21268069 21268078 chrX 21268150 21268159 4 80 3.0 3.0 3.0 1.0 90 chrX 21268069 intron CG32521 - chrX 21268114 intron CG32521 - chrX 21268159 intron CG32521 - chrX_4_21265001 chrX_21265001 RAL-805 2049 chrX 21358077 21358095 chrX 21358157 21358175 5 80 3.0 3.0 3.0 1.2 98 chrX 21358077 intergenic sol +,Sep1 + chrX 21358126 intergenic Sep1 +,sol + chrX 21358175 intergenic Sep1 +,sol + chrX_5_21355001 chrX_21355001 RAL-805 2050 chrX 21428336 21428367 chrX 21428526 21428533 8 186 1.5 0.5 1.0 4.0 197 chrX 21428336 intron CG42343 - chrX 21428434 intron CG42343 - chrX 21428533 intron CG42343 - chrX_8_21425001 chrX_21425001 RAL-805 2051 chrX 21458692 21458727 chrX 21464127 21464163 Ivk 6 5436 2.5 3.0 2.8 1.6 5471 chrX 21458692 intergenic not near genes chrX 21461428 intergenic not near genes chrX 21464163 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-805 2052 chrX 21516987 21517021 chrX 21517065 21517099 9 78 2.0 3.0 2.5 2.6 112 chrX 21516987 intron CR45082 - chrX 21517043 intron CR45082 - chrX 21517099 intron CR45082 - chrX_9_21515001 chrX_21515001 RAL-805 2053 chrX 21565412 21565434 chrX 21565490 21565512 6 78 1.0 3.0 2.0 2.0 100 chrX 21565412 intergenic not near genes chrX 21565462 intergenic not near genes chrX 21565512 intergenic not near genes chrX_6_21565001 chrX_21565001 RAL-805 2054 chrX 21668263 21668286 chrX 21668345 21668370 4 83 7.5 10.0 8.8 0.4 107 chrX 21668263 intergenic not near genes chrX 21668316 intergenic not near genes chrX 21668370 intergenic not near genes chrX_4_21665001 chrX_21665001 RAL-805 2055 chrX 22661982 22661991 chrX 22662081 22662090 4 99 0.0 0.5 0.2 3.3 108 chrX 22661982 intron CR44997 + chrX 22662036 intron CR44997 + chrX 22662090 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-805 2056 chrX 22697496 22697499 chrX 22701793 22701796 Juan 4 4296 3.5 4.0 3.8 0.8 4300 chrX 22697496 intron CR44997 + chrX 22699646 intron CR44997 + chrX 22701796 intron CR44997 + chrX_4_22695001 chrX_22695001 RAL-805 2057 chrX 22697500 22697505 chrX 22701792 22701801 Juan 4 4296 2.5 4.0 3.2 1.0 4301 chrX 22697500 intron CR44997 + chrX 22699650 intron CR44997 + chrX 22701801 intron CR44997 + chrX_4_22695001 chrX_22695001 RAL-805 2058 chrX 22771508 22771538 chrX 22774799 22774828 297 4 3291 2.0 2.5 2.2 1.2 3320 chrX 22771508 intron CR44997 + chrX 22773168 intron CR44997 + chrX 22774828 intron CR44997 + chrX_4_22770001 chrX_22770001 RAL-805 2059 chrX 22784082 22784103 chrX 22784165 22784186 6 83 4.0 1.0 2.5 1.7 104 chrX 22784082 intron CR44997 + chrX 22784134 intron CR44997 + chrX 22784186 intron CR44997 + chrX_6_22780001 chrX_22780001 RAL-805 2060 chrX 22798779 22798796 chrX 22798896 22798913 7 117 1.5 0.0 0.8 3.9 134 chrX 22798779 intergenic not near genes chrX 22798846 intergenic not near genes chrX 22798913 intergenic not near genes chrX_7_22795001 chrX_22795001 RAL-805 2061 chrX 22867976 22868009 chrX 22868090 22868123 5 113 1.0 0.0 0.5 3.3 147 chrX 22867976 exon CG42346 + chrX 22868050 intron CG42346 + chrX 22868123 intron CG42346 + chrX_5_22865001 chrX_22865001 RAL-805 2062 chrX 22895730 22895755 chrX 22895844 22895865 4 115 3.5 4.0 3.8 0.8 135 chrX 22895730 intergenic not near genes chrX 22895798 intergenic not near genes chrX 22895865 intergenic not near genes chrX_4_22895001 chrX_22895001 RAL-805 2063 chrX 22987107 22987123 chrX 22989766 22989782 Burdock 4 2659 1.0 1.5 1.2 1.8 2675 chrX 22987107 intron,intron stnA -,stnB - chrX 22988444 intron,intron stnA -,stnB - chrX 22989782 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-805 2064 chrX 22996311 22996330 chrX 23003545 23003564 roo 5 7234 5.0 4.5 4.8 0.9 7253 chrX 22996311 intron,intron stnA -,stnB - chrX 22999938 intron,intron stnA -,stnB - chrX 23003564 intron,intron stnA -,stnB - chrX_5_22995001 chrX_22995001 RAL-805 2065 chrY 975592 975817 chrY 975709 975882 9 137 94.5 90.5 92.5 0.1 290 chrY 975592 intergenic not near genes chrY 975737 intergenic not near genes chrY 975882 intergenic not near genes chrY_9_975001 chrY_975001 RAL-805 2066 chrY 1419902 1419922 chrY 1420156 1420176 4 254 5.0 3.0 4.0 0.8 274 chrY 1419902 intergenic not near genes chrY 1420039 intergenic not near genes chrY 1420176 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-805 2067 chrY 3666431 3666454 chrY 3666584 3666607 4 153 0.5 0.0 0.2 3.3 176 chrY 3666431 intergenic not near genes chrY 3666519 intergenic not near genes chrY 3666607 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-805