SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 10295 10325 412 462 7545 4 30 '3-1 72.33 1.4 1.7 3` UTR l(2)gl - chr2L_4_10001 chr2L_10001 0.75 RAL-804 2 chr2L 357166 357234 1360 3388 10 29 68 '16-13 66.78 5.8 4.3 exon Ent1 - chr2L_29_355001 chr2L_355001 0.55 RAL-804 3 chr2L 451176 451235 FB 3 15 11 59 '5-6 69.99 5.3 1.7 intron crq - chr2L_11_450001 chr2L_450001 0.45 RAL-804 4 chr2L 478861 478880 jockey 4673 4682 5 19 '2-3 59.22 7.5 0.6 intron,intron ush +,cbt - chr2L_5_475001 chr2L_475001 0.40 RAL-804 5 chr2L 1535475 1535496 Juan 2 23 6 21 '3-3 60.78 3.1 1.5 intergenic not near genes chr2L_6_1535001 chr2L_1535001 0.50 RAL-804 6 chr2L 1774455 1774478 blood 29 6 9 23 '2-7 61.06 12.7 0.7 intergenic not near genes chr2L_9_1770001 chr2L_1770001 0.22 RAL-804 7 chr2L 2014737 2014804 jockey 4992 4676 9 67 '6-3 62.22 5.8 1.3 intron CG4238 + chr2L_9_2010001 chr2L_2010001 0.67 RAL-804 8 chr2L 2621552 2621578 BS 5068 5042 9 26 '5-4 60.98 1.2 4.1 intergenic not near genes chr2L_9_2620001 chr2L_2620001 0.56 RAL-804 9 chr2L 2656956 2657002 hobo 6 2923 4 46 '3-1 64.29 6.5 0.5 3` UTR Prosbeta4R2 + chr2L_4_2655001 chr2L_2655001 0.75 RAL-804 10 chr2L 3631854 3631924 P-element 2882 2 8 70 '5-3 52.75 3.5 1.8 intron for - chr2L_8_3630001 chr2L_3630001 0.62 RAL-804 11 chr2L 3632246 3632287 P-element 7 24 16 41 '9-7 47.09 5.6 2.4 intron for - chr2L_16_3630001 chr2L_3630001 0.56 RAL-804 12 chr2L 3748935 3748958 jockey 31 8 12 23 '5-7 59.61 6.5 1.6 intron CG10019 + chr2L_12_3745001 chr2L_3745001 0.42 RAL-804 13 chr2L 5805232 5805256 jockey 8 32 9 24 '1-8 55.74 0.3 6.9 intergenic CG11034 + chr2L_9_5805001 chr2L_5805001 0.11 RAL-804 14 chr2L 6411316 6411381 P-element 3 2879 16 65 '8-8 46.85 6.5 2.1 5` UTR CG42368 - chr2L_16_6410001 chr2L_6410001 0.50 RAL-804 15 chr2L 6446126 6446210 opus 110 498 23 84 '10-13 65.21 4.5 4.2 exon CG9527 - chr2L_23_6445001 chr2L_6445001 0.43 RAL-804 16 chr2L 6594195 6594222 jockey 7 32 14 27 '10-4 65.43 3.3 3.3 intron CG11319 - chr2L_14_6590001 chr2L_6590001 0.71 RAL-804 17 chr2L 6641238 6641294 mdg3 5266 248 5 56 '3-2 61.42 1.1 2.4 intron CG31635 - chr2L_5_6640001 chr2L_6640001 0.60 RAL-804 18 chr2L 6933930 6933962 Doc 4 36 11 32 '4-7 70.60 4.6 2.0 exon CG18304 - chr2L_11_6930001 chr2L_6930001 0.36 RAL-804 19 chr2L 7106185 7106262 roo 403 8662 16 77 '8-8 65.30 2.4 4.7 intron Pvf3 - chr2L_16_7105001 chr2L_7105001 0.50 RAL-804 20 chr2L 7203833 7203896 P-element 5 10 13 63 '5-8 47.09 7.8 1.5 intron CG4502 - chr2L_13_7200001 chr2L_7200001 0.38 RAL-804 21 chr2L 7249662 7249702 P-element 2863 10 5 40 '2-3 46.68 4.3 0.9 intergenic Ndae1 - chr2L_5_7245001 chr2L_7245001 0.40 RAL-804 22 chr2L 8206059 8206140 Tirant 400 4 17 81 '13-4 61.77 4.9 2.9 intergenic CR44121 -,CG8419 +,CR44120 - chr2L_17_8205001 chr2L_8205001 0.76 RAL-804 23 chr2L 8533190 8533258 mdg1 7453 7045 9 68 '7-2 61.93 1.6 3.5 intron CG17834 + chr2L_9_8530001 chr2L_8530001 0.78 RAL-804 24 chr2L 8950634 8950715 S-element 1 1714 11 81 '6-5 68.70 3.5 2.4 intron C1GalTA - chr2L_11_8950001 chr2L_8950001 0.55 RAL-804 25 chr2L 9193236 9193313 copia 4867 249 5 77 '3-2 63.73 1.6 1.9 intron tai + chr2L_5_9190001 chr2L_9190001 0.60 RAL-804 26 chr2L 9233386 9233454 roo 402 6 14 68 '11-3 65.18 2.0 4.7 intron tai + chr2L_14_9230001 chr2L_9230001 0.79 RAL-804 27 chr2L 9613246 9613314 P-element 2879 2885 12 68 '7-5 53.38 7.3 1.4 5` UTR Trx-2 + chr2L_12_9610001 chr2L_9610001 0.58 RAL-804 28 chr2L 9619956 9620007 FB 25 1 7 51 '2-5 67.18 3.6 1.5 intron GlcAT-S + chr2L_7_9615001 chr2L_9615001 0.29 RAL-804 29 chr2L 9782340 9782399 P-element 3 2886 9 59 '3-6 54.75 6.6 1.2 intergenic IP3K1 + chr2L_9_9780001 chr2L_9780001 0.33 RAL-804 30 chr2L 10115655 10115743 opus 496 111 10 88 '4-6 65.99 4.9 1.7 intron,intron CG44153 -,CG34109 + chr2L_10_10115001 chr2L_10115001 0.40 RAL-804 31 chr2L 10213217 10213293 1360 2 3388 31 76 '10-21 68.54 4.5 5.6 exon CG4901 + chr2L_31_10210001 chr2L_10210001 0.32 RAL-804 32 chr2L 10587920 10587987 copia 13 255 9 67 '3-6 64.69 3.2 2.1 intron Trim9 + chr2L_9_10585001 chr2L_10585001 0.33 RAL-804 33 chr2L 10714052 10714133 roo 411 8666 14 81 '8-6 65.55 4.9 2.4 intergenic not near genes chr2L_14_10710001 chr2L_10710001 0.57 RAL-804 34 chr2L 11827199 11827271 roo 8667 404 16 72 '8-8 66.55 4.1 3.1 intron Pde1c - chr2L_16_11825001 chr2L_11825001 0.50 RAL-804 35 chr2L 11884731 11884813 Max-element 8234 301 17 82 '6-11 60.44 4.7 3.0 intron Pde1c - chr2L_17_11880001 chr2L_11880001 0.35 RAL-804 36 chr2L 12049460 12049524 copia 4871 242 10 64 '7-3 60.98 4.8 1.7 5` UTR CG14945 + chr2L_10_12045001 chr2L_12045001 0.70 RAL-804 37 chr2L 12267225 12267304 412 493 2 9 79 '6-3 60.93 1.8 3.2 intron aret + chr2L_9_12265001 chr2L_12265001 0.67 RAL-804 38 chr2L 12362488 12362515 diver 225 6086 9 27 '5-4 59.86 1.2 4.1 intron bru-2 + chr2L_9_12360001 chr2L_12360001 0.56 RAL-804 39 chr2L 12500804 12500880 roo 8666 406 16 76 '7-9 65.33 5.5 2.5 intron bun - chr2L_16_12500001 chr2L_12500001 0.44 RAL-804 40 chr2L 12822808 12822840 P-element 2867 2879 4 32 '2-2 44.48 6.5 0.5 intergenic kek1 - chr2L_4_12820001 chr2L_12820001 0.50 RAL-804 41 chr2L 12847408 12847463 hobo 2926 3 5 55 '1-4 54.82 5.8 0.7 intergenic not near genes chr2L_5_12845001 chr2L_12845001 0.20 RAL-804 42 chr2L 12896977 12897032 accord 7036 7036 4 55 '1-3 70.22 2.1 1.3 intergenic not near genes chr2L_4_12895001 chr2L_12895001 0.25 RAL-804 43 chr2L 12964220 12964302 Max-element 302 8235 20 82 '10-10 65.22 3.6 4.3 intergenic not near genes chr2L_20_12960001 chr2L_12960001 0.50 RAL-804 44 chr2L 12984822 12984854 jockey 4671 4702 4 32 '3-1 67.10 7.1 0.5 intergenic not near genes chr2L_4_12980001 chr2L_12980001 0.75 RAL-804 45 chr2L 13121972 13122035 I-element 5346 3 18 63 '9-9 64.85 7.7 2.1 intergenic not near genes chr2L_18_13120001 chr2L_13120001 0.50 RAL-804 46 chr2L 13154019 13154078 412 7542 7070 9 59 '6-3 61.65 0.0 9.0 intergenic not near genes chr2L_9_13150001 chr2L_13150001 0.67 RAL-804 47 chr2L 13345416 13345500 mdg3 5498 5249 10 84 '7-3 62.55 2.2 3.1 intergenic not near genes chr2L_10_13345001 chr2L_13345001 0.70 RAL-804 48 chr2L 13494434 13494489 I-element 4 5347 11 55 '9-2 63.67 3.7 2.3 intron CG42784 + chr2L_11_13490001 chr2L_13490001 0.82 RAL-804 49 chr2L 13719191 13719262 copia 246 4869 5 71 '1-4 63.47 1.4 2.1 intergenic not near genes chr2L_5_13715001 chr2L_13715001 0.20 RAL-804 50 chr2L 14262801 14262855 pogo 4 2075 8 54 '5-3 69.79 2.9 2.1 intergenic wb + chr2L_8_14260001 chr2L_14260001 0.62 RAL-804 51 chr2L 14490301 14490317 P-element 2882 2 7 16 '4-3 56.99 7.7 0.8 intergenic not near genes chr2L_7_14490001 chr2L_14490001 0.57 RAL-804 52 chr2L 14616209 14616255 P-element 23 2881 4 46 '3-1 45.23 6.3 0.5 intron,intron,intron osp -,Adh +,Adhr + chr2L_4_14615001 chr2L_14615001 0.75 RAL-804 53 chr2L 14722212 14722256 roo 29 402 4 44 '1-3 62.41 1.3 1.7 intergenic not near genes chr2L_4_14720001 chr2L_14720001 0.25 RAL-804 54 chr2L 14923496 14923515 X-element 11 31 10 19 '4-6 52.43 3.9 2.0 intron CG42313 - chr2L_10_14920001 chr2L_14920001 0.40 RAL-804 55 chr2L 15237936 15237966 hobo 3 33 10 30 '5-5 63.77 7.1 1.2 intron ZnT35C - chr2L_10_15235001 chr2L_15235001 0.50 RAL-804 56 chr2L 15552657 15552732 P-element 2885 2886 17 75 '10-7 57.09 5.5 2.6 intergenic kek3 + chr2L_17_15550001 chr2L_15550001 0.59 RAL-804 57 chr2L 15768583 15768658 opus 492 112 12 75 '7-5 67.89 4.9 2.0 intergenic Ku80 -,wek - chr2L_12_15765001 chr2L_15765001 0.58 RAL-804 58 chr2L 16268886 16268902 S-element 1695 1711 5 16 '4-1 58.94 0.4 3.6 intron crp - chr2L_5_16265001 chr2L_16265001 0.80 RAL-804 59 chr2L 16361793 16361864 412 4 487 6 71 '1-5 61.53 3.4 1.4 intergenic not near genes chr2L_6_16360001 chr2L_16360001 0.17 RAL-804 60 chr2L 16665739 16665810 412 11 495 6 71 '1-5 58.72 2.1 1.9 intron Trpgamma - chr2L_6_16665001 chr2L_16665001 0.17 RAL-804 61 chr2L 16690120 16690182 gypsy 7437 6995 12 62 '7-5 63.86 4.1 2.4 intron grp + chr2L_12_16690001 chr2L_16690001 0.58 RAL-804 62 chr2L 17506789 17506866 roo 411 8664 9 77 '4-5 68.15 3.9 1.8 intron Dhc36C + chr2L_9_17505001 chr2L_17505001 0.44 RAL-804 63 chr2L 17727404 17727475 F-element 4677 12 5 71 '3-2 64.71 3.4 1.1 intron CadN - chr2L_5_17725001 chr2L_17725001 0.60 RAL-804 64 chr2L 17737284 17737339 copia 4896 257 5 55 '1-4 63.20 3.1 1.2 intron CadN - chr2L_5_17735001 chr2L_17735001 0.20 RAL-804 65 chr2L 17826911 17826967 HMS-Beagle 234 14 4 56 '1-3 60.34 2.8 1.1 intron CadN2 - chr2L_4_17825001 chr2L_17825001 0.25 RAL-804 66 chr2L 17941873 17941947 roo 3 405 6 74 '3-3 67.03 2.8 1.6 intergenic not near genes chr2L_6_17940001 chr2L_17940001 0.50 RAL-804 67 chr2L 18171487 18171543 roo 9047 1 4 56 '1-3 67.57 6.1 0.6 intron CG42750 - chr2L_4_18170001 chr2L_18170001 0.25 RAL-804 68 chr2L 18245147 18245204 Transpac 5222 4937 7 57 '4-3 66.99 2.4 2.1 intron CG42750 - chr2L_7_18245001 chr2L_18245001 0.57 RAL-804 69 chr2L 18262423 18262477 Transpac 4935 298 5 54 '4-1 65.33 3.3 1.2 intron CG42750 - chr2L_5_18260001 chr2L_18260001 0.80 RAL-804 70 chr2L 18338645 18338703 roo 9049 8664 8 58 '4-4 70.50 2.6 2.2 intron Fas3 + chr2L_8_18335001 chr2L_18335001 0.50 RAL-804 71 chr2L 18465370 18465402 hobo 2908 2709 8 32 '6-2 61.93 3.8 1.7 intron let-7-C + chr2L_8_18465001 chr2L_18465001 0.75 RAL-804 72 chr2L 18465482 18465547 roo 9059 3 8 65 '6-2 64.65 2.4 2.4 intron let-7-C + chr2L_8_18465001 chr2L_18465001 0.75 RAL-804 73 chr2L 19034412 19034441 412 464 7543 9 29 '4-5 62.17 5.2 1.5 intron CG31800 - chr2L_9_19030001 chr2L_19030001 0.44 RAL-804 74 chr2L 19134502 19134555 P-element 2875 12 8 53 '4-4 45.17 4.1 1.6 intron,intron l(2)37Cg -,brat + chr2L_8_19130001 chr2L_19130001 0.50 RAL-804 75 chr2L 19425818 19425897 Max-element 8233 8535 6 79 '3-3 67.73 5.4 0.9 intron,intron,intron Pax -,CG13085 +,CG16771 + chr2L_6_19425001 chr2L_19425001 0.50 RAL-804 76 chr2L 19437493 19437562 pogo 6 2092 5 69 '3-2 70.08 2.4 1.5 intron CG10237 - chr2L_5_19435001 chr2L_19435001 0.60 RAL-804 77 chr2L 19615915 19615987 hopper 6 1412 14 72 '6-8 62.57 5.5 2.2 intron Lar + chr2L_14_19615001 chr2L_19615001 0.43 RAL-804 78 chr2L 20085087 20085149 P-element 25 1 12 62 '4-8 48.31 7.1 1.5 intron neb + chr2L_12_20085001 chr2L_20085001 0.33 RAL-804 79 chr2L 20128831 20128855 jockey 33 9 4 24 '3-1 63.55 3.2 1.0 intergenic not near genes chr2L_4_20125001 chr2L_20125001 0.75 RAL-804 80 chr2L 20236092 20236154 hobo 1 2927 11 62 '9-2 60.86 6.4 1.5 intergenic not near genes chr2L_11_20235001 chr2L_20235001 0.82 RAL-804 81 chr2L 20405417 20405472 roo 9064 8682 7 55 '5-2 67.01 5.8 1.0 intron CG10947 - chr2L_7_20405001 chr2L_20405001 0.71 RAL-804 82 chr2L 20817659 20817689 flea 4803 22 4 30 '2-2 60.12 3.1 1.0 intergenic CheB38a -,CheB38b - chr2L_4_20815001 chr2L_20815001 0.50 RAL-804 83 chr2L 20818664 20818722 roo 9 398 5 58 '2-3 61.53 4.8 0.9 intergenic CheB38a - chr2L_5_20815001 chr2L_20815001 0.40 RAL-804 84 chr2L 20986791 20986873 Transpac 1 311 7 82 '2-5 66.03 6.4 0.9 intron CG42238 - chr2L_7_20985001 chr2L_20985001 0.29 RAL-804 85 chr2L 20995823 20995902 roo 8664 407 12 79 '6-6 69.16 5.0 2.0 intron CG42238 - chr2L_12_20995001 chr2L_20995001 0.50 RAL-804 86 chr2L 21703512 21703593 297 6974 6581 15 81 '8-7 68.08 6.3 2.1 intron CG31619 + chr2L_15_21700001 chr2L_21700001 0.53 RAL-804 87 chr2L 21751947 21752021 Tirant 8496 8107 4 74 '3-1 69.34 4.3 0.8 intron step - chr2L_4_21750001 chr2L_21750001 0.75 RAL-804 88 chr2L 22923601 22923636 3S18 5763 5798 15 35 '8-7 64.92 16.3 0.9 intergenic not near genes chr2L_15_22920001 chr2L_22920001 0.53 RAL-804 89 chr2L 22927383 22927417 Doc 4 36 8 34 '5-3 62.30 10.0 0.7 intron lt + chr2L_8_22925001 chr2L_22925001 0.62 RAL-804 90 chr2L 23083061 23083120 HMS-Beagle 6809 236 6 59 '3-3 64.17 1.6 2.3 intergenic not near genes chr2L_6_23080001 chr2L_23080001 0.50 RAL-804 91 chr2L 23295812 23295852 micropia 454 4972 11 40 '5-6 63.16 3.3 2.6 intergenic not near genes chr2L_11_23295001 chr2L_23295001 0.45 RAL-804 92 chr2L 23313671 23313750 S-element 7 2 7 79 '3-4 64.76 1.6 2.7 intergenic CG40042 - chr2L_7_23310001 chr2L_23310001 0.43 RAL-804 93 chr2R 330122 330185 HMS-Beagle2 7197 6904 4 63 '2-2 68.33 0.5 2.7 intergenic not near genes chr2R_4_330001 chr2R_330001 0.50 RAL-804 94 chr2R 1320688 1320704 diver2 366 4882 4 16 '3-1 57.06 21.9 0.2 intergenic not near genes chr2R_4_1320001 chr2R_1320001 0.75 RAL-804 95 chr2R 2009403 2009421 I-element 5 19 4 18 '2-2 75.25 1.1 1.9 intron CG17684 - chr2R_4_2005001 chr2R_2005001 0.50 RAL-804 96 chr2R 3523847 3523871 Cr1a 3994 4005 6 24 '3-3 61.18 2.6 1.7 intergenic not near genes chr2R_6_3520001 chr2R_3520001 0.50 RAL-804 97 chr2R 4265353 4265417 flea 4756 4998 8 64 '3-5 61.32 8.8 0.8 intergenic not near genes chr2R_8_4265001 chr2R_4265001 0.38 RAL-804 98 chr2R 4559063 4559116 pogo 10 2080 4 53 '3-1 72.67 6.1 0.6 intron Stlk + chr2R_4_4555001 chr2R_4555001 0.75 RAL-804 99 chr2R 4627547 4627627 Transpac 4918 307 14 80 '5-9 67.04 5.5 2.2 intergenic not near genes chr2R_14_4625001 chr2R_4625001 0.36 RAL-804 100 chr2R 5262579 5262649 1360 3387 3382 6 70 '2-4 70.00 6.9 0.8 intron d4 + chr2R_6_5260001 chr2R_5260001 0.33 RAL-804 101 chr2R 5485071 5485138 1360 3379 2 9 67 '4-5 63.63 4.3 1.7 intron CG30440 - chr2R_9_5485001 chr2R_5485001 0.44 RAL-804 102 chr2R 5531164 5531183 1360 71 52 9 19 '5-4 58.79 3.9 1.8 intron CG30438 + chr2R_9_5530001 chr2R_5530001 0.56 RAL-804 103 chr2R 5876391 5876457 roo 394 8664 6 66 '2-4 69.44 3.4 1.4 intergenic not near genes chr2R_6_5875001 chr2R_5875001 0.33 RAL-804 104 chr2R 6060885 6060917 G2 72 42 9 32 '6-3 64.02 3.5 2.0 intron CCHa2-R + chr2R_9_6060001 chr2R_6060001 0.67 RAL-804 105 chr2R 6438350 6438373 Stalker4 401 7334 9 23 '4-5 65.54 15.0 0.6 intergenic not near genes chr2R_9_6435001 chr2R_6435001 0.44 RAL-804 106 chr2R 6492912 6492978 copia 4874 248 17 66 '10-7 63.92 2.7 4.6 intergenic not near genes chr2R_17_6490001 chr2R_6490001 0.59 RAL-804 107 chr2R 7131245 7131327 Transpac 311 1 20 82 '10-10 65.63 5.9 2.9 intron Cyp9b2 - chr2R_20_7130001 chr2R_7130001 0.50 RAL-804 108 chr2R 7232683 7232715 jockey 37 5 14 32 '6-8 66.19 5.5 2.2 intergenic Or43a - chr2R_14_7230001 chr2R_7230001 0.43 RAL-804 109 chr2R 7955097 7955151 FB 12 9 12 54 '4-8 64.55 1.4 5.0 intron CG14764 - chr2R_12_7955001 chr2R_7955001 0.33 RAL-804 110 chr2R 8310862 8310908 pogo 2079 9 10 46 '2-8 60.93 5.0 1.7 3` UTR CR44449 - chr2R_10_8310001 chr2R_8310001 0.20 RAL-804 111 chr2R 8527819 8527902 R1A1-element 4886 5331 18 83 '9-9 65.51 4.8 3.1 intron mtt - chr2R_18_8525001 chr2R_8525001 0.50 RAL-804 112 chr2R 8734054 8734115 P-element 2886 16 11 61 '4-7 44.51 7.1 1.4 5` UTR stmA - chr2R_11_8730001 chr2R_8730001 0.36 RAL-804 113 chr2R 8786285 8786369 HMS-Beagle 6794 246 11 84 '8-3 67.85 5.3 1.7 intergenic not near genes chr2R_11_8785001 chr2R_8785001 0.73 RAL-804 114 chr2R 8790047 8790124 roo 8667 408 12 77 '7-5 65.05 2.5 3.4 intergenic not near genes chr2R_12_8790001 chr2R_8790001 0.58 RAL-804 115 chr2R 8862985 8863043 412 489 7072 5 58 '3-2 64.63 5.4 0.8 exon RyR + chr2R_5_8860001 chr2R_8860001 0.60 RAL-804 116 chr2R 9218869 9218909 I-element 9 5333 7 40 '4-3 64.61 5.0 1.2 intergenic not near genes chr2R_7_9215001 chr2R_9215001 0.57 RAL-804 117 chr2R 9247380 9247416 roo 411 9038 7 36 '2-5 69.37 7.4 0.8 intergenic hig - chr2R_7_9245001 chr2R_9245001 0.29 RAL-804 118 chr2R 9316896 9316931 HMS-Beagle 6796 31 5 35 '3-2 70.84 6.7 0.6 intron,intron CG13739 -,CG13954 - chr2R_5_9315001 chr2R_9315001 0.60 RAL-804 119 chr2R 9408175 9408228 FB 1 22 4 53 '1-3 66.56 6.9 0.5 intron wun - chr2R_4_9405001 chr2R_9405001 0.25 RAL-804 120 chr2R 9440608 9440683 pogo 8 2100 7 75 '2-5 69.87 5.2 1.1 intron ced-6 - chr2R_7_9440001 chr2R_9440001 0.29 RAL-804 121 chr2R 9799587 9799635 roo 8677 9052 6 48 '3-3 66.39 3.8 1.2 intron CG1688 - chr2R_6_9795001 chr2R_9795001 0.50 RAL-804 122 chr2R 9870979 9871055 roo 404 396 13 76 '5-8 66.66 2.1 4.2 intron cbx - chr2R_13_9870001 chr2R_9870001 0.38 RAL-804 123 chr2R 9995043 9995116 1360 1 4 6 73 '1-5 69.83 2.2 1.9 3` UTR Pka-R2 - chr2R_6_9995001 chr2R_9995001 0.17 RAL-804 124 chr2R 10102594 10102644 pogo 2098 9 4 50 '1-3 59.41 7.2 0.5 intron 14-3-3zeta + chr2R_4_10100001 chr2R_10100001 0.25 RAL-804 125 chr2R 10323114 10323163 opus 494 20 4 49 '3-1 68.08 2.7 1.1 3` UTR CG42732 - chr2R_4_10320001 chr2R_10320001 0.75 RAL-804 126 chr2R 10326854 10326873 roo 6 8689 5 19 '3-2 62.93 8.9 0.5 intron CG42732 - chr2R_5_10325001 chr2R_10325001 0.60 RAL-804 127 chr2R 10465179 10465234 hopper 1412 1399 4 55 '2-2 60.51 3.8 0.8 intergenic not near genes chr2R_4_10465001 chr2R_10465001 0.50 RAL-804 128 chr2R 10478468 10478550 Tirant 400 1 7 82 '5-2 63.72 7.7 0.8 5` UTR,5` UTR whd -,CR45134 + chr2R_7_10475001 chr2R_10475001 0.71 RAL-804 129 chr2R 10535083 10535138 P-element 2881 13 4 55 '2-2 57.09 6.9 0.5 intron lola - chr2R_4_10535001 chr2R_10535001 0.50 RAL-804 130 chr2R 10857767 10857822 jockey 4982 4670 8 55 '4-4 59.67 2.5 2.3 intron CG30015 - chr2R_8_10855001 chr2R_10855001 0.50 RAL-804 131 chr2R 10939687 10939763 mdg3 5251 240 10 76 '5-5 62.11 2.1 3.2 3` UTR Spn47C - chr2R_10_10935001 chr2R_10935001 0.50 RAL-804 132 chr2R 11195150 11195226 hobo 2709 2 16 76 '4-12 62.40 3.9 3.3 intron shn + chr2R_16_11195001 chr2R_11195001 0.25 RAL-804 133 chr2R 11223735 11223809 HMS-Beagle 240 6798 10 74 '5-5 67.43 3.4 2.3 intron CG7737 + chr2R_10_11220001 chr2R_11220001 0.50 RAL-804 134 chr2R 11426927 11426950 F-element 22 14 8 23 '3-5 58.92 4.6 1.4 intron Drip - chr2R_8_11425001 chr2R_11425001 0.38 RAL-804 135 chr2R 11605181 11605208 P-element 2884 9 11 27 '5-6 46.03 5.4 1.7 intron tou - chr2R_11_11605001 chr2R_11605001 0.45 RAL-804 136 chr2R 11659066 11659121 1360 8 3373 10 55 '7-3 66.41 8.7 1.0 intron Roc2 - chr2R_10_11655001 chr2R_11655001 0.70 RAL-804 137 chr2R 11747051 11747133 mdg1 7038 7038 11 82 '4-7 63.85 3.7 2.3 intergenic not near genes chr2R_11_11745001 chr2R_11745001 0.36 RAL-804 138 chr2R 11926597 11926619 opus 474 496 5 22 '4-1 68.64 2.0 1.7 intergenic not near genes chr2R_5_11925001 chr2R_11925001 0.80 RAL-804 139 chr2R 12185337 12185399 accord 7373 9 12 62 '7-5 64.73 6.9 1.5 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_12_12185001 chr2R_12185001 0.58 RAL-804 140 chr2R 12319849 12319902 invader4 8 306 4 53 '1-3 64.76 2.2 1.2 intergenic not near genes chr2R_4_12315001 chr2R_12315001 0.25 RAL-804 141 chr2R 12336625 12336653 pogo 31 3 7 28 '3-4 66.48 2.4 2.1 intergenic CG34021 +,CG8490 + chr2R_7_12335001 chr2R_12335001 0.43 RAL-804 142 chr2R 12780390 12780448 P-element 2880 2880 12 58 '5-7 49.30 4.8 2.1 intergenic sca + chr2R_12_12780001 chr2R_12780001 0.42 RAL-804 143 chr2R 13148878 13148947 FB 3 5 8 69 '3-5 67.08 6.0 1.1 exon Ack-like - chr2R_8_13145001 chr2R_13145001 0.38 RAL-804 144 chr2R 13197398 13197425 flea 230 257 7 27 '4-3 70.67 3.9 1.4 intergenic not near genes chr2R_7_13195001 chr2R_13195001 0.57 RAL-804 145 chr2R 13344264 13344310 hobo 4 2925 7 46 '4-3 65.17 4.6 1.2 intron CR44206 - chr2R_7_13340001 chr2R_13340001 0.57 RAL-804 146 chr2R 13435424 13435481 roo 8667 9052 11 57 '7-4 71.04 3.2 2.6 intron CG42321 - chr2R_11_13435001 chr2R_13435001 0.64 RAL-804 147 chr2R 13612227 13612275 mdg1 412 24 9 48 '8-1 61.56 5.1 1.5 intergenic not near genes chr2R_9_13610001 chr2R_13610001 0.89 RAL-804 148 chr2R 13700493 13700542 hopper 17 7 7 49 '4-3 62.88 3.8 1.5 intron fas + chr2R_7_13700001 chr2R_13700001 0.57 RAL-804 149 chr2R 14484761 14484853 Tc3 320 238 7 92 '5-2 75.24 4.2 1.3 intron L + chr2R_7_14480001 chr2R_14480001 0.71 RAL-804 150 chr2R 14484774 14484843 1360 4 6 19 69 '8-11 69.15 4.4 3.5 intron L + chr2R_19_14480001 chr2R_14480001 0.42 RAL-804 151 chr2R 14715240 14715322 412 496 2 12 82 '4-8 64.51 4.0 2.4 intergenic not near genes chr2R_12_14715001 chr2R_14715001 0.33 RAL-804 152 chr2R 14766079 14766150 hobo 4 2938 11 71 '8-3 63.32 6.1 1.5 intron Spred - chr2R_11_14765001 chr2R_14765001 0.73 RAL-804 153 chr2R 15307038 15307071 roo 9041 411 10 33 '7-3 68.67 2.1 3.2 5` UTR Trpm - chr2R_10_15305001 chr2R_15305001 0.70 RAL-804 154 chr2R 15394296 15394376 Transpac 4918 5227 17 80 '7-10 66.74 6.4 2.3 intergenic not near genes chr2R_17_15390001 chr2R_15390001 0.41 RAL-804 155 chr2R 15568964 15569067 accord 186 7029 5 103 '2-3 77.89 4.4 0.9 intron,5` UTR Flo1 -,CG30466 + chr2R_5_15565001 chr2R_15565001 0.40 RAL-804 156 chr2R 16574674 16574744 opus 7114 7497 6 70 '2-4 64.90 6.0 0.9 3` UTR CG8317 - chr2R_6_16570001 chr2R_16570001 0.33 RAL-804 157 chr2R 16891846 16891864 hopper 7 26 4 18 '3-1 61.41 7.7 0.5 intron CG8910 - chr2R_4_16890001 chr2R_16890001 0.75 RAL-804 158 chr2R 17686348 17686379 roo 405 9037 12 31 '2-10 67.15 7.8 1.4 intron,3` UTR HPS4 +,CG42562 + chr2R_12_17685001 chr2R_17685001 0.17 RAL-804 159 chr2R 18171903 18171954 17.6 6954 488 10 51 '1-9 65.28 2.2 3.1 intron Dgp-1 - chr2R_10_18170001 chr2R_18170001 0.10 RAL-804 160 chr2R 18184017 18184041 P-element 2883 27 8 24 '5-3 51.40 12.1 0.6 5` UTR CG5721 - chr2R_8_18180001 chr2R_18180001 0.62 RAL-804 161 chr2R 18727789 18727866 Transpac 4918 304 20 77 '9-11 64.52 3.8 4.2 intron Hs3st-A + chr2R_20_18725001 chr2R_18725001 0.45 RAL-804 162 chr2R 18729260 18729322 roo 8673 399 17 62 '9-8 62.47 6.7 2.2 intron,exon Hs3st-A +,List - chr2R_17_18725001 chr2R_18725001 0.53 RAL-804 163 chr2R 19056916 19056990 copia 249 4869 6 74 '1-5 61.78 2.6 1.7 intergenic not near genes chr2R_6_19055001 chr2R_19055001 0.17 RAL-804 164 chr2R 19096870 19096941 hopper 1409 3 14 71 '7-7 58.17 3.2 3.3 intron 5-HT1A + chr2R_14_19095001 chr2R_19095001 0.50 RAL-804 165 chr2R 19319883 19319960 roo 3 408 12 77 '5-7 66.34 5.1 2.0 intron Rgk1 - chr2R_12_19315001 chr2R_19315001 0.42 RAL-804 166 chr2R 19357535 19357574 BS 5077 3 8 39 '1-7 68.22 4.1 1.6 5` UTR CG11961 + chr2R_8_19355001 chr2R_19355001 0.12 RAL-804 167 chr2R 20389619 20389645 flea 256 4989 6 26 '3-3 66.15 5.8 0.9 intergenic not near genes chr2R_6_20385001 chr2R_20385001 0.50 RAL-804 168 chr2R 20526744 20526765 HMS-Beagle 6808 6829 10 21 '2-8 68.00 18.1 0.5 exon CG13422 + chr2R_10_20525001 chr2R_20525001 0.20 RAL-804 169 chr2R 20688082 20688160 flea 4761 256 9 78 '6-3 70.08 4.6 1.6 intergenic not near genes chr2R_9_20685001 chr2R_20685001 0.67 RAL-804 170 chr2R 20856205 20856272 Juan 4104 4204 12 67 '10-2 61.54 4.8 2.1 intergenic not near genes chr2R_12_20855001 chr2R_20855001 0.83 RAL-804 171 chr2R 21080670 21080701 17.6 491 7387 5 31 '4-1 68.27 7.5 0.6 intron Treh + chr2R_5_21080001 chr2R_21080001 0.80 RAL-804 172 chr2R 21362763 21362808 Tirant 8116 8479 5 45 '2-3 71.18 4.2 1.0 intron cv-2 - chr2R_5_21360001 chr2R_21360001 0.40 RAL-804 173 chr2R 21409535 21409571 hobo 4 2914 5 36 '2-3 68.57 6.1 0.7 intron Sdc - chr2R_5_21405001 chr2R_21405001 0.40 RAL-804 174 chr2R 21433090 21433150 hopper 2 17 13 60 '7-6 69.55 2.0 4.3 intron Sdc - chr2R_13_21430001 chr2R_21430001 0.54 RAL-804 175 chr2R 21435608 21435667 jockey 4983 14 9 59 '5-4 61.41 3.7 1.9 intron Sdc - chr2R_9_21435001 chr2R_21435001 0.56 RAL-804 176 chr2R 21459135 21459219 roo 408 8660 21 84 '14-7 66.61 5.2 3.4 intron Sdc - chr2R_21_21455001 chr2R_21455001 0.67 RAL-804 177 chr2R 21575586 21575634 roo 406 29 14 48 '8-6 69.09 4.9 2.4 intron CG10440 - chr2R_14_21575001 chr2R_21575001 0.57 RAL-804 178 chr2R 21971317 21971380 mdg1 7459 10 10 63 '6-4 56.07 2.3 3.0 intergenic CG34029 - chr2R_10_21970001 chr2R_21970001 0.60 RAL-804 179 chr2R 22453242 22453338 copia 258 4869 11 96 '5-6 61.64 0.9 5.8 intergenic not near genes chr2R_11_22450001 chr2R_22450001 0.45 RAL-804 180 chr2R 22796390 22796469 roo 8664 407 16 79 '10-6 66.44 2.1 5.2 intron CG42260 - chr2R_16_22795001 chr2R_22795001 0.62 RAL-804 181 chr2R 23171874 23171905 R1A1-element 5335 5309 13 31 '8-5 66.42 9.2 1.3 intron CG34371 - chr2R_13_23170001 chr2R_23170001 0.62 RAL-804 182 chr2R 23278693 23278761 hopper 1409 1411 14 68 '7-7 65.14 3.8 2.9 intergenic not near genes chr2R_14_23275001 chr2R_23275001 0.50 RAL-804 183 chr2R 23377047 23377103 P-element 9 13 8 56 '5-3 46.20 8.2 0.9 intergenic Golgin245 - chr2R_8_23375001 chr2R_23375001 0.62 RAL-804 184 chr2R 23510898 23510974 412 4 7545 12 76 '6-6 66.53 2.7 3.2 intergenic CG3906 - chr2R_12_23510001 chr2R_23510001 0.50 RAL-804 185 chr2R 23521226 23521310 Dm88 4370 4373 6 84 '3-3 68.10 4.2 1.2 intron RabX1 - chr2R_6_23520001 chr2R_23520001 0.50 RAL-804 186 chr2R 23604171 23604224 1360 3374 3380 8 53 '2-6 62.04 1.0 4.0 intron CG17664 - chr2R_8_23600001 chr2R_23600001 0.25 RAL-804 187 chr2R 25096643 25096712 hopper 9 1413 14 69 '3-11 61.60 4.4 2.6 intron lov - chr2R_14_25095001 chr2R_25095001 0.21 RAL-804 188 chr3L 27610 27631 INE-1 572 551 4 21 '3-1 58.02 3.1 1.0 intergenic not near genes chr3L_4_25001 chr3L_25001 0.75 RAL-804 189 chr3L 688482 688566 roo 8664 412 16 84 '8-8 67.51 2.9 4.1 intergenic CG32483 - chr3L_16_685001 chr3L_685001 0.50 RAL-804 190 chr3L 819457 819486 blood 23 7011 9 29 '6-3 66.58 5.8 1.3 intergenic not near genes chr3L_9_815001 chr3L_815001 0.67 RAL-804 191 chr3L 956965 957017 I-element 5344 120 5 52 '1-4 45.87 3.8 1.0 intron Glut1 + chr3L_5_955001 chr3L_955001 0.20 RAL-804 192 chr3L 1188635 1188704 hobo 2 2932 17 69 '14-3 59.92 3.3 4.0 intergenic not near genes chr3L_17_1185001 chr3L_1185001 0.82 RAL-804 193 chr3L 1240471 1240553 roo 409 8663 17 82 '11-6 64.61 7.0 2.1 exon CG9194 + chr3L_17_1240001 chr3L_1240001 0.65 RAL-804 194 chr3L 2024311 2024388 copia 4872 255 13 77 '11-2 64.79 3.8 2.7 intergenic not near genes chr3L_13_2020001 chr3L_2020001 0.85 RAL-804 195 chr3L 2472177 2472249 roo 408 8672 23 72 '13-10 69.78 2.8 6.1 intron CG45186 + chr3L_23_2470001 chr3L_2470001 0.57 RAL-804 196 chr3L 2901759 2901807 roo 8679 398 5 48 '1-4 63.33 4.9 0.8 intron Shab + chr3L_5_2900001 chr3L_2900001 0.20 RAL-804 197 chr3L 2909021 2909049 I-element 1 29 4 28 '3-1 63.00 4.1 0.8 intron Shab + chr3L_4_2905001 chr3L_2905001 0.75 RAL-804 198 chr3L 3141250 3141323 mdg1 7038 7044 6 73 '5-1 63.05 2.8 1.6 intron CG11537 - chr3L_6_3140001 chr3L_3140001 0.83 RAL-804 199 chr3L 3250375 3250449 P-element 2886 2884 17 74 '10-7 50.04 4.5 3.1 5` UTR CR43626 + chr3L_17_3250001 chr3L_3250001 0.59 RAL-804 200 chr3L 3348066 3348126 roo 8624 5 12 60 '7-5 63.25 3.6 2.6 intron kst + chr3L_12_3345001 chr3L_3345001 0.58 RAL-804 201 chr3L 3538774 3538801 Doc 2 29 9 27 '3-6 64.23 4.5 1.6 intron Eip63E + chr3L_9_3535001 chr3L_3535001 0.33 RAL-804 202 chr3L 3749461 3749534 roo 400 8663 13 73 '3-10 67.74 1.7 4.8 intron CG32264 - chr3L_13_3745001 chr3L_3745001 0.23 RAL-804 203 chr3L 3793995 3794056 mdg1 2 7441 6 61 '2-4 60.22 1.2 2.7 intron CG32264 - chr3L_6_3790001 chr3L_3790001 0.33 RAL-804 204 chr3L 4344271 4344330 FB 12 6 16 59 '10-6 65.65 4.4 3.0 intron Cip4 - chr3L_16_4340001 chr3L_4340001 0.62 RAL-804 205 chr3L 4367735 4367817 pogo 2100 1 12 82 '5-7 71.29 2.0 4.0 3` UTR DopEcR - chr3L_12_4365001 chr3L_4365001 0.42 RAL-804 206 chr3L 4503446 4503507 I-element 5350 5 7 61 '2-5 66.82 4.8 1.2 exon NT1 - chr3L_7_4500001 chr3L_4500001 0.29 RAL-804 207 chr3L 4556277 4556344 297 381 6583 10 67 '2-8 68.62 5.5 1.5 intron CG42540 + chr3L_10_4555001 chr3L_4555001 0.20 RAL-804 208 chr3L 4636374 4636419 hobo 29 2936 5 45 '3-2 71.95 2.9 1.3 intron axo - chr3L_5_4635001 chr3L_4635001 0.60 RAL-804 209 chr3L 5231814 5231885 blood 7011 368 16 71 '9-7 63.69 3.8 3.3 intron shep - chr3L_16_5230001 chr3L_5230001 0.56 RAL-804 210 chr3L 5266950 5267030 roo 8665 409 18 80 '6-12 66.76 2.0 6.0 intron shep - chr3L_18_5265001 chr3L_5265001 0.33 RAL-804 211 chr3L 5309537 5309565 jockey 30 6 10 28 '5-5 62.73 5.0 1.7 intergenic not near genes chr3L_10_5305001 chr3L_5305001 0.50 RAL-804 212 chr3L 5438753 5438811 hopper 1402 10 8 58 '3-5 61.05 4.8 1.4 intron CG34391 + chr3L_8_5435001 chr3L_5435001 0.38 RAL-804 213 chr3L 5519133 5519209 roo 406 2 13 76 '8-5 66.24 3.9 2.7 intron Lkr - chr3L_13_5515001 chr3L_5515001 0.62 RAL-804 214 chr3L 5573972 5574058 Tirant 1 403 19 86 '10-9 65.09 3.2 4.5 intron Msr-110 - chr3L_19_5570001 chr3L_5570001 0.53 RAL-804 215 chr3L 5709680 5709761 297 1 394 9 81 '7-2 64.23 3.2 2.1 intron sif + chr3L_9_5705001 chr3L_5705001 0.78 RAL-804 216 chr3L 6015060 6015080 accord 7037 188 5 20 '3-2 74.19 1.4 2.1 intron PVRAP + chr3L_5_6015001 chr3L_6015001 0.60 RAL-804 217 chr3L 6289842 6289864 Doc 3 16 4 22 '1-3 48.69 5.0 0.7 intergenic not near genes chr3L_4_6285001 chr3L_6285001 0.25 RAL-804 218 chr3L 7232584 7232650 pogo 9 2092 12 66 '7-5 60.64 4.4 2.2 intergenic not near genes chr3L_12_7230001 chr3L_7230001 0.58 RAL-804 219 chr3L 7280325 7280350 jockey 4964 4988 6 25 '4-2 64.39 0.9 3.2 intron unc-13-4A - chr3L_6_7280001 chr3L_7280001 0.67 RAL-804 220 chr3L 7771984 7772048 412 7068 484 10 64 '4-6 61.73 4.1 2.0 intron Clk - chr3L_10_7770001 chr3L_7770001 0.40 RAL-804 221 chr3L 7881123 7881183 FB 16 1 13 60 '5-8 61.97 1.4 5.4 intron CG32365 + chr3L_13_7880001 chr3L_7880001 0.38 RAL-804 222 chr3L 8249085 8249118 jockey 4669 4701 11 33 '2-9 64.68 2.4 3.2 intron Dscam4 + chr3L_11_8245001 chr3L_8245001 0.18 RAL-804 223 chr3L 8323717 8323831 mdg1 28 43 4 114 '1-3 54.00 0.7 2.4 intergenic not near genes chr3L_4_8320001 chr3L_8320001 0.25 RAL-804 224 chr3L 8395202 8395222 BS 4791 4811 9 20 '5-4 54.97 8.4 1.0 intergenic not near genes chr3L_9_8395001 chr3L_8395001 0.56 RAL-804 225 chr3L 8951694 8951713 hopper 1408 23 7 19 '3-4 65.71 8.2 0.8 intron,intron CG43783 -,orb2 - chr3L_7_8950001 chr3L_8950001 0.43 RAL-804 226 chr3L 8953203 8953279 P-element 1 1 13 76 '10-3 50.51 6.1 1.8 intron,5` UTR CG43783 -,orb2 - chr3L_13_8950001 chr3L_8950001 0.77 RAL-804 227 chr3L 9462567 9462587 P-element 33 13 4 20 '1-3 45.33 7.7 0.5 5` UTR CG44838 + chr3L_4_9460001 chr3L_9460001 0.25 RAL-804 228 chr3L 9750408 9750490 roo 8661 407 16 82 '14-2 67.59 3.4 3.6 intron CG42268 - chr3L_16_9750001 chr3L_9750001 0.88 RAL-804 229 chr3L 9907321 9907338 BS 5023 5006 7 17 '5-2 62.09 1.9 2.4 intergenic not near genes chr3L_7_9905001 chr3L_9905001 0.71 RAL-804 230 chr3L 9964509 9964595 opus 499 7113 10 86 '8-2 65.70 4.7 1.8 intron CG34356 + chr3L_10_9960001 chr3L_9960001 0.80 RAL-804 231 chr3L 9984183 9984248 412 487 10 9 65 '1-8 60.74 0.9 4.7 intron dpr6 + chr3L_9_9980001 chr3L_9980001 0.11 RAL-804 232 chr3L 10722899 10722955 hobo 2923 6 11 56 '2-9 65.95 5.1 1.8 intergenic not near genes chr3L_11_10720001 chr3L_10720001 0.18 RAL-804 233 chr3L 11014257 11014318 roo 408 2 7 61 '3-4 53.53 2.9 1.8 intergenic not near genes chr3L_7_11010001 chr3L_11010001 0.43 RAL-804 234 chr3L 11228004 11228083 roo 1 408 24 79 '13-11 65.61 1.5 9.6 intron CG42671 + chr3L_24_11225001 chr3L_11225001 0.54 RAL-804 235 chr3L 11308693 11308744 roo 407 28 9 51 '6-3 68.21 6.7 1.2 intergenic not near genes chr3L_9_11305001 chr3L_11305001 0.67 RAL-804 236 chr3L 12020816 12020879 I-element 5348 6 20 63 '4-16 60.40 4.2 3.8 intron rols - chr3L_20_12020001 chr3L_12020001 0.20 RAL-804 237 chr3L 12127554 12127626 diver 225 5901 11 72 '3-8 55.94 2.2 3.4 intergenic Ir68b -,CG34241 + chr3L_11_12125001 chr3L_12125001 0.27 RAL-804 238 chr3L 12883905 12883963 297 6598 389 11 58 '2-9 68.98 4.6 2.0 intergenic not near genes chr3L_11_12880001 chr3L_12880001 0.18 RAL-804 239 chr3L 12893235 12893384 17.6 7406 422 9 149 '8-1 65.52 4.2 1.7 intron CG14118 + chr3L_9_12890001 chr3L_12890001 0.89 RAL-804 240 chr3L 13193169 13193240 roo 407 4 18 71 '12-6 63.49 4.5 3.3 intergenic not near genes chr3L_18_13190001 chr3L_13190001 0.67 RAL-804 241 chr3L 13218814 13218896 Transpac 1 311 11 82 '3-8 64.98 3.0 2.8 3` UTR CR45098 - chr3L_11_13215001 chr3L_13215001 0.27 RAL-804 242 chr3L 13280300 13280323 F-element 54 31 6 23 '5-1 61.64 4.2 1.2 intergenic not near genes chr3L_6_13280001 chr3L_13280001 0.83 RAL-804 243 chr3L 13303131 13303203 Stalker2 395 1 17 72 '7-10 65.91 5.2 2.7 3` UTR CR44557 - chr3L_17_13300001 chr3L_13300001 0.41 RAL-804 244 chr3L 13331942 13331966 jockey 4761 4785 8 24 '5-3 61.85 3.2 1.9 intergenic not near genes chr3L_8_13330001 chr3L_13330001 0.62 RAL-804 245 chr3L 13473682 13473734 diver 5916 227 6 52 '2-4 68.48 1.0 3.0 intron CG10089 - chr3L_6_13470001 chr3L_13470001 0.33 RAL-804 246 chr3L 13685946 13686005 hobo 7 2709 4 59 '2-2 63.75 5.9 0.6 intron bru-3 - chr3L_4_13685001 chr3L_13685001 0.50 RAL-804 247 chr3L 13739779 13739804 Rt1a 5053 5035 7 25 '2-5 64.33 5.9 1.0 intron bru-3 - chr3L_7_13735001 chr3L_13735001 0.29 RAL-804 248 chr3L 14271972 14272040 3S18 5773 342 14 68 '7-7 64.61 3.3 3.3 intergenic not near genes chr3L_14_14270001 chr3L_14270001 0.50 RAL-804 249 chr3L 14963449 14963498 Ivk 5360 2 4 49 '3-1 69.34 2.7 1.1 intergenic not near genes chr3L_4_14960001 chr3L_14960001 0.75 RAL-804 250 chr3L 15792535 15792602 pogo 2092 1 7 67 '2-5 66.96 6.8 0.9 intergenic not near genes chr3L_7_15790001 chr3L_15790001 0.29 RAL-804 251 chr3L 16477918 16477990 pogo 4 2095 12 72 '9-3 66.95 5.2 1.9 intron,intron CG33158 +,aos - chr3L_12_16475001 chr3L_16475001 0.75 RAL-804 252 chr3L 16662370 16662549 hopper 4 2 9 179 '4-5 62.34 0.6 5.6 intergenic Galphaf - chr3L_9_16660001 chr3L_16660001 0.44 RAL-804 253 chr3L 16833259 16833304 roo 407 8698 4 45 '2-2 73.67 1.3 1.7 intergenic not near genes chr3L_4_16830001 chr3L_16830001 0.50 RAL-804 254 chr3L 16919756 16919831 R1A1-element 4878 5334 16 75 '8-8 67.17 5.4 2.5 intron Lmpt + chr3L_16_16915001 chr3L_16915001 0.50 RAL-804 255 chr3L 17207197 17207227 jockey 37 7 14 30 '7-7 62.83 5.4 2.2 intron Rbp6 - chr3L_14_17205001 chr3L_17205001 0.50 RAL-804 256 chr3L 18105516 18105533 Doc 12 29 9 17 '2-7 64.70 6.8 1.2 intron CG13698 - chr3L_9_18105001 chr3L_18105001 0.22 RAL-804 257 chr3L 18265709 18265790 pogo 2099 1 16 81 '6-10 66.07 6.5 2.1 intergenic not near genes chr3L_16_18265001 chr3L_18265001 0.38 RAL-804 258 chr3L 18419373 18419437 jockey 4677 4986 12 64 '9-3 58.24 4.8 2.1 intergenic not near genes chr3L_12_18415001 chr3L_18415001 0.75 RAL-804 259 chr3L 18704217 18704290 hopper 1 8 16 73 '13-3 61.87 4.7 2.8 intergenic not near genes chr3L_16_18700001 chr3L_18700001 0.81 RAL-804 260 chr3L 18812849 18812902 17.6 6 7397 6 53 '5-1 68.61 0.8 3.3 intron CG14073 - chr3L_6_18810001 chr3L_18810001 0.83 RAL-804 261 chr3L 19020165 19020233 roo 409 13 12 68 '8-4 71.12 2.0 4.0 intron nkd - chr3L_12_19020001 chr3L_19020001 0.67 RAL-804 262 chr3L 19027406 19027438 I-element 5099 5067 8 32 '2-6 63.16 1.6 3.1 intron nkd - chr3L_8_19025001 chr3L_19025001 0.25 RAL-804 263 chr3L 19274805 19274875 transib2 6 2819 15 70 '9-6 64.34 3.5 3.3 intergenic not near genes chr3L_15_19270001 chr3L_19270001 0.60 RAL-804 264 chr3L 19371970 19372041 gypsy10 5985 5648 7 71 '4-3 66.07 4.1 1.4 intron CG32206 - chr3L_7_19370001 chr3L_19370001 0.57 RAL-804 265 chr3L 19672369 19672419 3S18 6080 5770 9 50 '2-7 65.07 3.7 1.9 intergenic not near genes chr3L_9_19670001 chr3L_19670001 0.22 RAL-804 266 chr3L 19788124 19788187 FB 6 3 10 63 '6-4 60.63 4.0 2.0 intron,intron CG42637 -,Gyc76C - chr3L_10_19785001 chr3L_19785001 0.60 RAL-804 267 chr3L 20224146 20224223 Chimpo 185 3 15 77 '7-8 64.79 4.3 2.8 intron CG17147 + chr3L_15_20220001 chr3L_20220001 0.47 RAL-804 268 chr3L 20447982 20448032 mdg1 6 399 10 50 '7-3 63.19 3.3 2.3 intron CG5910 + chr3L_10_20445001 chr3L_20445001 0.70 RAL-804 269 chr3L 20528257 20528323 pogo 2095 8 11 66 '6-5 69.75 1.7 4.1 3` UTR Rcd2 - chr3L_11_20525001 chr3L_20525001 0.55 RAL-804 270 chr3L 20974733 20974779 roo 2 376 10 46 '7-3 67.34 3.5 2.2 intergenic CG33286 - chr3L_10_20970001 chr3L_20970001 0.70 RAL-804 271 chr3L 21096913 21096948 blood 7042 7008 12 35 '5-7 65.69 3.4 2.7 intron ko - chr3L_12_21095001 chr3L_21095001 0.42 RAL-804 272 chr3L 21145691 21145710 INE-1 550 568 8 19 '4-4 56.45 3.9 1.6 intron Ac78C - chr3L_8_21145001 chr3L_21145001 0.50 RAL-804 273 chr3L 22434408 22434471 I-element 5347 7 20 63 '5-15 58.26 5.4 3.1 intergenic not near genes chr3L_20_22430001 chr3L_22430001 0.25 RAL-804 274 chr3L 22658294 22658358 hobo 2934 5 12 64 '2-10 64.30 4.5 2.2 intergenic not near genes chr3L_12_22655001 chr3L_22655001 0.17 RAL-804 275 chr3L 22982231 22982256 jockey 36 11 12 25 '6-6 61.17 4.1 2.4 intergenic not near genes chr3L_12_22980001 chr3L_22980001 0.50 RAL-804 276 chr3L 23083370 23083391 1360 173 187 12 21 '6-6 57.47 4.4 2.2 intergenic not near genes chr3L_12_23080001 chr3L_23080001 0.50 RAL-804 277 chr3L 23210710 23210738 copia 4869 4897 5 28 '3-2 66.13 3.2 1.2 intron nAChRalpha4 + chr3L_5_23210001 chr3L_23210001 0.60 RAL-804 278 chr3L 23320067 23320137 pogo 2098 7 5 70 '1-4 68.25 2.3 1.5 intron alpha-Cat - chr3L_5_23320001 chr3L_23320001 0.20 RAL-804 279 chr3L 25455110 25455143 HMS-Beagle2 6882 6915 7 33 '3-4 69.72 4.0 1.4 intergenic not near genes chr3L_7_25455001 chr3L_25455001 0.43 RAL-804 280 chr3L 25752790 25752865 Transpac 4918 302 11 75 '4-7 70.44 2.0 3.7 intergenic CG17374 - chr3L_11_25750001 chr3L_25750001 0.36 RAL-804 281 chr3R 433126 433143 1731 299 316 4 17 '2-2 60.00 3.0 1.0 intergenic not near genes chr3R_4_430001 chr3R_430001 0.50 RAL-804 282 chr3R 1423341 1423419 roo 403 8661 10 78 '3-7 73.31 2.4 2.9 intron CG40155 + chr3R_10_1420001 chr3R_1420001 0.30 RAL-804 283 chr3R 4522653 4522723 Transpac 309 4930 17 70 '8-9 68.60 5.0 2.8 intron CG34357 - chr3R_17_4520001 chr3R_4520001 0.47 RAL-804 284 chr3R 4553271 4553384 Juan 24 17 5 113 '1-4 53.07 1.1 2.4 intron CG34357 - chr3R_5_4550001 chr3R_4550001 0.20 RAL-804 285 chr3R 4554307 4554378 Bari1 1705 11 12 71 '5-7 67.04 3.0 3.0 intron CG34357 - chr3R_12_4550001 chr3R_4550001 0.42 RAL-804 286 chr3R 4682122 4682190 roo 8665 397 15 68 '7-8 64.40 4.0 3.0 intron CG43427 + chr3R_15_4680001 chr3R_4680001 0.47 RAL-804 287 chr3R 4741339 4741372 F-element 4241 4274 6 33 '2-4 61.72 7.0 0.8 intron tacc - chr3R_6_4740001 chr3R_4740001 0.33 RAL-804 288 chr3R 5245581 5245656 1360 1 3388 24 75 '12-12 68.42 5.5 3.7 intron CG12163 - chr3R_24_5245001 chr3R_5245001 0.50 RAL-804 289 chr3R 5493480 5493558 flea 4755 5009 11 78 '9-2 72.37 4.8 1.9 exon CG31547 - chr3R_11_5490001 chr3R_5490001 0.82 RAL-804 290 chr3R 5671389 5671462 1360 2 3386 24 73 '16-8 65.51 4.5 4.4 intron Atg17 + chr3R_24_5670001 chr3R_5670001 0.67 RAL-804 291 chr3R 5999300 5999372 roo 8664 400 9 72 '3-6 59.48 3.2 2.1 intergenic not near genes chr3R_9_5995001 chr3R_5995001 0.33 RAL-804 292 chr3R 6052027 6052089 mdg1 7442 1 4 62 '3-1 69.00 3.7 0.9 intergenic not near genes chr3R_4_6050001 chr3R_6050001 0.75 RAL-804 293 chr3R 6395600 6395640 FB 13 24 12 40 '10-2 66.65 6.0 1.7 intron Dmtn - chr3R_12_6395001 chr3R_6395001 0.83 RAL-804 294 chr3R 6517990 6518024 roo 8693 9054 4 34 '2-2 71.00 1.6 1.5 intergenic not near genes chr3R_4_6515001 chr3R_6515001 0.50 RAL-804 295 chr3R 6526730 6526809 pogo 2100 4 12 79 '3-9 64.22 2.5 3.4 intergenic not near genes chr3R_12_6525001 chr3R_6525001 0.25 RAL-804 296 chr3R 6806582 6806669 blood 380 7008 15 87 '6-9 65.67 1.5 6.0 intergenic not near genes chr3R_15_6805001 chr3R_6805001 0.40 RAL-804 297 chr3R 7491594 7491648 P-element 2881 17 20 54 '10-10 43.25 6.4 2.7 intron alpha-Est10 - chr3R_20_7490001 chr3R_7490001 0.50 RAL-804 298 chr3R 7754362 7754436 roo 409 7 7 74 '3-4 59.24 1.7 2.6 intergenic not near genes chr3R_7_7750001 chr3R_7750001 0.43 RAL-804 299 chr3R 7793167 7793251 flea 255 4754 18 84 '7-11 70.62 4.3 3.4 3` UTR CG10086 + chr3R_18_7790001 chr3R_7790001 0.39 RAL-804 300 chr3R 8210862 8210941 gypsy5 411 6943 26 79 '18-8 63.52 4.6 4.6 intergenic not near genes chr3R_26_8210001 chr3R_8210001 0.69 RAL-804 301 chr3R 8893129 8893189 roo 8664 387 14 60 '10-4 68.73 3.1 3.4 intron pyd - chr3R_14_8890001 chr3R_8890001 0.71 RAL-804 302 chr3R 8927667 8927750 Tirant 8107 8505 19 83 '9-10 69.50 4.8 3.3 intron pyd - chr3R_19_8925001 chr3R_8925001 0.47 RAL-804 303 chr3R 9106180 9106253 1360 3388 3384 19 73 '9-10 64.39 5.5 2.9 intron pum - chr3R_19_9105001 chr3R_9105001 0.47 RAL-804 304 chr3R 9161635 9161712 pogo 1 2095 11 77 '5-6 63.42 3.3 2.6 intron pum - chr3R_11_9160001 chr3R_9160001 0.45 RAL-804 305 chr3R 9312198 9312224 Doc 8 34 5 26 '3-2 62.13 3.7 1.1 intron CG8861 - chr3R_5_9310001 chr3R_9310001 0.60 RAL-804 306 chr3R 9339859 9339932 P-element 3 2886 9 73 '6-3 50.20 5.3 1.4 3` UTR CR43301 - chr3R_9_9335001 chr3R_9335001 0.67 RAL-804 307 chr3R 10157762 10157826 pogo 4 2085 12 64 '11-1 68.63 3.8 2.5 exon Invadolysin + chr3R_12_10155001 chr3R_10155001 0.92 RAL-804 308 chr3R 10267221 10267275 P-element 9 7 13 54 '6-7 45.67 6.6 1.7 intron CG43143 + chr3R_13_10265001 chr3R_10265001 0.46 RAL-804 309 chr3R 10428900 10428923 BS 5024 5001 10 23 '7-3 59.48 4.9 1.7 intergenic not near genes chr3R_10_10425001 chr3R_10425001 0.70 RAL-804 310 chr3R 10679969 10680143 opus 110 7367 24 174 '23-1 67.54 7.7 2.8 intron CG14688 - chr3R_24_10675001 chr3R_10675001 0.96 RAL-804 311 chr3R 10875905 10875955 P-element 26 2 7 50 '3-4 47.30 1.2 3.2 intergenic CG4596 +,Sodh-2 + chr3R_7_10875001 chr3R_10875001 0.43 RAL-804 312 chr3R 10990729 10990801 roo 9070 8672 9 72 '4-5 64.45 1.6 3.5 intron CG34114 + chr3R_9_10990001 chr3R_10990001 0.44 RAL-804 313 chr3R 11262605 11262685 Transpac 310 1 5 80 '2-3 69.65 6.4 0.7 intergenic not near genes chr3R_5_11260001 chr3R_11260001 0.40 RAL-804 314 chr3R 11485556 11485634 copia 253 4868 17 78 '8-9 67.64 3.7 3.6 intergenic not near genes chr3R_17_11485001 chr3R_11485001 0.47 RAL-804 315 chr3R 11553654 11553726 hopper 1414 1407 14 72 '9-5 67.90 6.5 1.9 intergenic CG14708 + chr3R_14_11550001 chr3R_11550001 0.64 RAL-804 316 chr3R 11612025 11612097 297 6584 391 7 72 '4-3 67.81 5.2 1.1 intron Jupiter - chr3R_7_11610001 chr3R_11610001 0.57 RAL-804 317 chr3R 12205988 12206077 flea 4753 257 16 89 '4-12 65.39 3.5 3.6 intergenic not near genes chr3R_16_12205001 chr3R_12205001 0.25 RAL-804 318 chr3R 12213188 12213250 I-element 4 5347 8 62 '5-3 65.20 5.3 1.3 intergenic not near genes chr3R_8_12210001 chr3R_12210001 0.62 RAL-804 319 chr3R 12344804 12344848 I-element 5347 15 13 44 '5-8 64.43 3.4 3.0 intergenic not near genes chr3R_13_12340001 chr3R_12340001 0.38 RAL-804 320 chr3R 12574857 12574881 Doc 6 30 6 24 '3-3 62.00 6.1 0.8 intron Octbeta2R - chr3R_6_12570001 chr3R_12570001 0.50 RAL-804 321 chr3R 12719961 12720003 P-element 2882 2882 4 42 '1-3 53.10 6.9 0.5 exon Men - chr3R_4_12715001 chr3R_12715001 0.25 RAL-804 322 chr3R 12883351 12883426 297 395 6587 5 75 '3-2 65.48 4.4 0.9 intergenic not near genes chr3R_5_12880001 chr3R_12880001 0.60 RAL-804 323 chr3R 13428074 13428155 roo 8659 405 20 81 '9-11 67.52 3.5 4.4 3` UTR Act87E + chr3R_20_13425001 chr3R_13425001 0.45 RAL-804 324 chr3R 13732299 13732354 hopper 2 1390 9 55 '5-4 67.41 4.0 1.8 intron CG34383 + chr3R_9_13730001 chr3R_13730001 0.56 RAL-804 325 chr3R 14097040 14097111 transib2 1 2820 9 71 '4-5 58.97 4.5 1.6 intergenic CCHa1 -,CG9920 - chr3R_9_14095001 chr3R_14095001 0.44 RAL-804 326 chr3R 14173830 14173863 jockey 4791 4758 9 33 '4-5 65.87 6.2 1.2 3` UTR Dop1R1 - chr3R_9_14170001 chr3R_14170001 0.44 RAL-804 327 chr3R 14382693 14382765 pogo 11 2100 11 72 '4-7 70.92 2.2 3.4 intergenic not near genes chr3R_11_14380001 chr3R_14380001 0.36 RAL-804 328 chr3R 14703765 14703840 297 6589 395 21 75 '6-15 67.63 3.1 5.1 intron kibra - chr3R_21_14700001 chr3R_14700001 0.29 RAL-804 329 chr3R 14802450 14802530 412 223 224 5 80 '4-1 70.97 2.2 1.6 exon CG14857 + chr3R_5_14800001 chr3R_14800001 0.80 RAL-804 330 chr3R 15030612 15030633 jockey 34 13 5 21 '3-2 59.02 7.2 0.6 intergenic not near genes chr3R_5_15030001 chr3R_15030001 0.60 RAL-804 331 chr3R 15047379 15047396 F-element 25 16 7 17 '2-5 55.75 2.2 2.2 intergenic not near genes chr3R_7_15045001 chr3R_15045001 0.29 RAL-804 332 chr3R 15054122 15054200 297 392 6582 19 78 '10-9 68.62 4.0 3.8 intergenic not near genes chr3R_19_15050001 chr3R_15050001 0.53 RAL-804 333 chr3R 15790051 15790080 flea 4733 4704 14 29 '10-4 68.97 12.1 1.1 exon c(3)G - chr3R_14_15790001 chr3R_15790001 0.71 RAL-804 334 chr3R 15938212 15938281 copia 249 5 10 69 '2-8 60.37 3.7 2.1 intron Sap47 + chr3R_10_15935001 chr3R_15935001 0.20 RAL-804 335 chr3R 15938319 15938349 jockey 6 36 15 30 '7-8 57.71 7.1 1.9 intron Sap47 + chr3R_15_15935001 chr3R_15935001 0.47 RAL-804 336 chr3R 16068375 16068397 jockey 29 4 8 22 '5-3 57.60 1.7 3.0 intergenic Mhcl - chr3R_8_16065001 chr3R_16065001 0.62 RAL-804 337 chr3R 16259632 16259691 17.6 492 6950 8 59 '7-1 68.17 2.4 2.4 3` UTR tara + chr3R_8_16255001 chr3R_16255001 0.88 RAL-804 338 chr3R 17068903 17068980 mdg1 7458 7038 15 77 '9-6 65.67 4.0 3.0 intron Dad + chr3R_15_17065001 chr3R_17065001 0.60 RAL-804 339 chr3R 17077685 17077764 roo 407 8664 20 79 '7-13 66.26 5.4 3.1 intron Keap1 - chr3R_20_17075001 chr3R_17075001 0.35 RAL-804 340 chr3R 17733258 17733332 INE-1 562 554 8 74 '7-1 66.49 2.0 2.7 intergenic Lgr1 +,CG14321 + chr3R_8_17730001 chr3R_17730001 0.88 RAL-804 341 chr3R 17917120 17917177 jockey 16 4983 10 57 '6-4 59.60 2.2 3.1 intergenic not near genes chr3R_10_17915001 chr3R_17915001 0.60 RAL-804 342 chr3R 17964217 17964298 blood 378 7010 15 81 '6-9 64.36 2.2 4.7 intron cpo + chr3R_15_17960001 chr3R_17960001 0.40 RAL-804 343 chr3R 18202252 18202282 jockey 4756 4786 7 30 '4-3 64.87 5.1 1.1 intron CG7985 + chr3R_7_18200001 chr3R_18200001 0.57 RAL-804 344 chr3R 18203218 18203263 hopper 29 6 7 45 '4-3 67.96 1.3 3.0 intron CG7985 + chr3R_7_18200001 chr3R_18200001 0.57 RAL-804 345 chr3R 18788979 18789045 412 7544 13 14 66 '9-5 64.56 4.6 2.5 intron CG7720 - chr3R_14_18785001 chr3R_18785001 0.64 RAL-804 346 chr3R 18914847 18914877 P-element 32 2 7 30 '5-2 47.01 2.8 1.8 intergenic Xrp1 + chr3R_7_18910001 chr3R_18910001 0.71 RAL-804 347 chr3R 19275400 19275480 springer 7521 2 11 80 '8-3 65.43 4.1 2.2 intergenic not near genes chr3R_11_19275001 chr3R_19275001 0.73 RAL-804 348 chr3R 19537492 19537523 hopper 3 1383 13 31 '6-7 64.97 6.4 1.8 intron Dys + chr3R_13_19535001 chr3R_19535001 0.46 RAL-804 349 chr3R 19984363 19984413 BS 4 5083 5 50 '3-2 58.68 6.4 0.7 intron Hs6st - chr3R_5_19980001 chr3R_19980001 0.60 RAL-804 350 chr3R 20150179 20150246 Tabor 15 487 11 67 '3-8 63.09 3.3 2.6 intergenic not near genes chr3R_11_20150001 chr3R_20150001 0.27 RAL-804 351 chr3R 20238460 20238508 mdg1 7439 13 4 48 '3-1 65.67 0.0 4.0 intron Nlg4 + chr3R_4_20235001 chr3R_20235001 0.75 RAL-804 352 chr3R 20375033 20375107 297 6964 6582 6 74 '4-2 64.44 1.2 2.7 intergenic not near genes chr3R_6_20375001 chr3R_20375001 0.67 RAL-804 353 chr3R 20474264 20474322 17.6 6952 493 7 58 '2-5 73.52 3.1 1.7 intron Gfrl - chr3R_7_20470001 chr3R_20470001 0.29 RAL-804 354 chr3R 20696597 20696649 BS 4996 5085 9 52 '6-3 59.70 4.6 1.6 intron Oamb - chr3R_9_20695001 chr3R_20695001 0.67 RAL-804 355 chr3R 21173406 21173474 297 6969 6580 5 68 '3-2 69.10 1.5 2.0 intron SNF4Agamma + chr3R_5_21170001 chr3R_21170001 0.60 RAL-804 356 chr3R 21200019 21200084 1360 5 3380 18 65 '6-12 65.90 4.3 3.4 intron SNF4Agamma + chr3R_18_21200001 chr3R_21200001 0.33 RAL-804 357 chr3R 21582020 21582085 P-element 2881 6 8 65 '5-3 49.23 2.9 2.1 intron InR - chr3R_8_21580001 chr3R_21580001 0.62 RAL-804 358 chr3R 21991586 21991646 roo 23 411 8 60 '3-5 70.78 0.7 4.7 intron Eip93F + chr3R_8_21990001 chr3R_21990001 0.38 RAL-804 359 chr3R 22632268 22632328 412 15 7540 8 60 '4-4 65.64 4.3 1.5 intron loco - chr3R_8_22630001 chr3R_22630001 0.50 RAL-804 360 chr3R 22909846 22909925 mdg1 7459 1 13 79 '9-4 64.73 2.8 3.4 intron klg + chr3R_13_22905001 chr3R_22905001 0.69 RAL-804 361 chr3R 23482937 23483016 mdg1 1 421 13 79 '6-7 62.95 5.9 1.9 exon Ir94f + chr3R_13_23480001 chr3R_23480001 0.46 RAL-804 362 chr3R 23670914 23670945 I-element 33 2 10 31 '5-5 66.49 3.3 2.3 intergenic not near genes chr3R_10_23670001 chr3R_23670001 0.50 RAL-804 363 chr3R 24085480 24085558 roo 409 3 16 78 '8-8 69.10 3.7 3.4 intron 4EHP - chr3R_16_24085001 chr3R_24085001 0.50 RAL-804 364 chr3R 24753798 24753867 P-element 2881 2884 17 69 '12-5 51.33 4.6 3.0 intergenic asp +,tld + chr3R_17_24750001 chr3R_24750001 0.71 RAL-804 365 chr3R 25227034 25227097 blood 7045 7011 9 63 '2-7 53.53 6.8 1.2 intron Cad96Cb - chr3R_9_25225001 chr3R_25225001 0.22 RAL-804 366 chr3R 25258719 25258745 I-element 5320 5346 5 26 '3-2 65.07 6.4 0.7 intergenic Nup358 +,CG11857 + chr3R_5_25255001 chr3R_25255001 0.60 RAL-804 367 chr3R 25360021 25360074 roo 8665 9045 4 53 '2-2 70.00 2.6 1.1 intron,3` UTR Fur1 -,CG11913 + chr3R_4_25360001 chr3R_25360001 0.50 RAL-804 368 chr3R 25432059 25432131 hobo 2708 9 7 72 '3-4 64.31 6.5 0.9 intron Fur1 - chr3R_7_25430001 chr3R_25430001 0.43 RAL-804 369 chr3R 25930695 25930718 hobo 33 10 4 23 '1-3 64.40 6.5 0.5 intron CCAP-R - chr3R_4_25930001 chr3R_25930001 0.25 RAL-804 370 chr3R 26073268 26073347 297 6581 6973 10 79 '7-3 66.28 4.1 2.0 intergenic not near genes chr3R_10_26070001 chr3R_26070001 0.70 RAL-804 371 chr3R 26271664 26271691 mdg1 7065 394 4 27 '2-2 71.59 6.3 0.5 intron CG6154 + chr3R_4_26270001 chr3R_26270001 0.50 RAL-804 372 chr3R 26327856 26327935 opus 496 1 6 79 '4-2 67.48 4.0 1.2 intron CG33970 + chr3R_6_26325001 chr3R_26325001 0.67 RAL-804 373 chr3R 26544237 26544307 FB 1 1 9 70 '4-5 64.73 6.3 1.2 intron scrib + chr3R_9_26540001 chr3R_26540001 0.44 RAL-804 374 chr3R 26551017 26551087 3S18 336 5769 9 70 '5-4 66.27 1.8 3.2 intron scrib + chr3R_9_26550001 chr3R_26550001 0.56 RAL-804 375 chr3R 26955902 26955955 BS 5079 4 14 53 '4-10 57.05 3.8 2.9 intron CG6330 - chr3R_14_26955001 chr3R_26955001 0.29 RAL-804 376 chr3R 27282747 27282809 hobo 2925 2 10 62 '3-7 64.81 7.8 1.1 intergenic mrt - chr3R_10_27280001 chr3R_27280001 0.30 RAL-804 377 chr3R 27605265 27605342 297 6580 392 15 77 '9-6 63.57 5.8 2.2 intron dsd - chr3R_15_27605001 chr3R_27605001 0.60 RAL-804 378 chr3R 27664140 27664215 jockey 4759 4991 13 75 '10-3 63.66 2.4 3.8 intron unc80 + chr3R_13_27660001 chr3R_27660001 0.77 RAL-804 379 chr3R 27892894 27892949 mdg1 2 7439 5 55 '4-1 60.89 4.6 0.9 intron CG34353 - chr3R_5_27890001 chr3R_27890001 0.80 RAL-804 380 chr3R 27974685 27974707 jockey 4680 4681 4 22 '2-2 67.44 11.3 0.3 intron betaTub97EF - chr3R_4_27970001 chr3R_27970001 0.50 RAL-804 381 chr3R 28024537 28024601 roo 410 18 11 64 '7-4 65.59 5.2 1.8 intergenic not near genes chr3R_11_28020001 chr3R_28020001 0.64 RAL-804 382 chr3R 28078032 28078103 297 391 6589 8 71 '4-4 67.84 5.3 1.3 intron CG34362 + chr3R_8_28075001 chr3R_28075001 0.50 RAL-804 383 chr3R 28240320 28240338 hobo 33 15 4 18 '3-1 67.23 9.5 0.4 3` UTR CG34354 + chr3R_4_28240001 chr3R_28240001 0.75 RAL-804 384 chr3R 28396506 28396524 hobo 3 20 9 18 '5-4 57.72 6.6 1.2 intergenic not near genes chr3R_9_28395001 chr3R_28395001 0.56 RAL-804 385 chr3R 28404402 28404430 1360 32 3385 10 28 '6-4 68.53 2.4 2.9 intergenic not near genes chr3R_10_28400001 chr3R_28400001 0.60 RAL-804 386 chr3R 28625268 28625343 blood 372 7012 5 75 '1-4 63.96 7.7 0.6 intron CG10011 - chr3R_5_28625001 chr3R_28625001 0.20 RAL-804 387 chr3R 28752863 28752880 jockey 32 15 8 17 '4-4 60.23 12.0 0.6 intergenic not near genes chr3R_8_28750001 chr3R_28750001 0.50 RAL-804 388 chr3R 28859558 28859637 roo 408 8665 10 79 '8-2 63.10 5.9 1.4 intron spg + chr3R_10_28855001 chr3R_28855001 0.80 RAL-804 389 chr3R 28870335 28870418 opus 498 110 14 83 '6-8 64.45 2.7 3.8 3` UTR spg + chr3R_14_28870001 chr3R_28870001 0.43 RAL-804 390 chr3R 29330118 29330196 roo 8663 406 21 78 '14-7 67.38 5.9 3.0 intergenic not near genes chr3R_21_29330001 chr3R_29330001 0.67 RAL-804 391 chr3R 29411641 29411662 I-element 30 9 10 21 '5-5 63.23 2.7 2.7 intron Ptp99A + chr3R_10_29410001 chr3R_29410001 0.50 RAL-804 392 chr3R 29696881 29696952 pogo 9 2097 12 71 '6-6 66.98 2.6 3.3 3` UTR dmrt99B + chr3R_12_29695001 chr3R_29695001 0.50 RAL-804 393 chr3R 30751938 30752015 roo 406 8665 18 77 '8-10 70.28 2.1 5.8 intergenic not near genes chr3R_18_30750001 chr3R_30750001 0.44 RAL-804 394 chr3R 30765619 30765689 hopper 7 1413 16 70 '8-8 66.52 6.5 2.1 intergenic zfh1 + chr3R_16_30765001 chr3R_30765001 0.50 RAL-804 395 chr3R 30803824 30803887 FB 6 5 11 63 '7-4 65.81 4.5 2.0 intron wts - chr3R_11_30800001 chr3R_30800001 0.64 RAL-804 396 chr3R 30875880 30875965 roo 8661 411 20 85 '10-10 63.32 3.3 4.7 exon CG15546 - chr3R_20_30875001 chr3R_30875001 0.50 RAL-804 397 chr3R 31026506 31026566 hopper 11 2 12 60 '5-7 64.86 6.0 1.7 intergenic not near genes chr3R_12_31025001 chr3R_31025001 0.42 RAL-804 398 chr3R 31270816 31270900 flea 256 4755 16 84 '9-7 62.97 3.8 3.3 intergenic not near genes chr3R_16_31270001 chr3R_31270001 0.56 RAL-804 399 chr3R 31689248 31689301 P-element 17 2880 9 53 '4-5 43.56 5.1 1.5 3` UTR CR45565 - chr3R_9_31685001 chr3R_31685001 0.44 RAL-804 400 chr4 136461 136544 Doc2-element 218 244 4 83 '1-3 77.33 2.5 1.1 intron CG32000 + chr4_4_135001 chr4_135001 0.25 RAL-804 401 chr4 311205 311236 1360 1 3356 7 31 '3-4 68.57 4.7 1.2 3` UTR Zip102B - chr4_7_310001 chr4_310001 0.43 RAL-804 402 chr4 311561 311588 1360 31 3 8 27 '4-4 66.04 1.5 3.2 3` UTR Zip102B - chr4_8_310001 chr4_310001 0.50 RAL-804 403 chr4 396158 396227 S-element 1705 2 7 69 '2-5 64.14 3.6 1.5 intergenic CR44027 + chr4_7_395001 chr4_395001 0.29 RAL-804 404 chr4 1241863 1241945 roo 410 8664 16 82 '2-14 68.93 3.9 3.3 exon Caps + chr4_16_1240001 chr4_1240001 0.12 RAL-804 405 chrX 665841 665866 F-element 466 491 4 25 '2-2 65.00 2.8 1.1 intergenic not near genes chrX_4_665001 chrX_665001 0.50 RAL-804 406 chrX 711736 711756 297 6580 6601 5 20 '4-1 62.06 3.5 1.1 intron sdk + chrX_5_710001 chrX_710001 0.80 RAL-804 407 chrX 915103 915153 jockey 4758 4988 6 50 '4-2 63.56 4.1 1.2 intron CG43867 - chrX_6_915001 chrX_915001 0.67 RAL-804 408 chrX 1333829 1333911 Transpac 4918 5228 19 82 '7-12 62.47 4.6 3.4 intron CG11409 - chrX_19_1330001 chrX_1330001 0.37 RAL-804 409 chrX 1423291 1423364 blood 7380 7010 8 73 '3-5 61.70 5.2 1.3 intron futsch + chrX_8_1420001 chrX_1420001 0.38 RAL-804 410 chrX 1824275 1824344 roo 8663 409 20 69 '11-9 69.87 4.1 3.9 intron CG42666 + chrX_20_1820001 chrX_1820001 0.55 RAL-804 411 chrX 2350083 2350165 Burdock 1 256 12 82 '4-8 70.22 3.6 2.6 intron ptr - chrX_12_2350001 chrX_2350001 0.33 RAL-804 412 chrX 2888324 2888360 P-element 7 2870 6 36 '4-2 40.96 5.6 0.9 intron kirre + chrX_6_2885001 chrX_2885001 0.67 RAL-804 413 chrX 2918507 2918571 FB 9 3 10 64 '5-5 68.54 1.2 4.5 intron kirre + chrX_10_2915001 chrX_2915001 0.50 RAL-804 414 chrX 3057940 3057978 I-element 5337 10 6 38 '1-5 65.41 3.7 1.3 intron kirre + chrX_6_3055001 chrX_3055001 0.17 RAL-804 415 chrX 3210120 3210194 roo 401 8663 16 74 '3-13 68.28 4.6 2.9 intron dnc + chrX_16_3210001 chrX_3210001 0.19 RAL-804 416 chrX 3289245 3289288 P-element 2872 19 8 43 '5-3 43.52 3.4 1.8 intron dnc + chrX_8_3285001 chrX_3285001 0.62 RAL-804 417 chrX 4238875 4238936 jockey 4762 4988 12 61 '7-5 56.56 4.5 2.2 intergenic not near genes chrX_12_4235001 chrX_4235001 0.58 RAL-804 418 chrX 4239075 4239143 roo 9062 8666 18 68 '11-7 66.05 4.1 3.5 intergenic not near genes chrX_18_4235001 chrX_4235001 0.61 RAL-804 419 chrX 4267237 4267297 Bari1 22 1704 8 60 '3-5 66.28 3.3 1.9 intergenic not near genes chrX_8_4265001 chrX_4265001 0.38 RAL-804 420 chrX 4870107 4870168 hobo 3 2925 11 61 '7-4 70.14 3.6 2.4 intron CG42594 + chrX_11_4870001 chrX_4870001 0.64 RAL-804 421 chrX 4986908 4986961 hopper 8 1408 7 53 '2-5 63.14 2.6 1.9 intron CR44833 - chrX_7_4985001 chrX_4985001 0.29 RAL-804 422 chrX 5018715 5018780 Juan 4204 4021 7 65 '3-4 58.67 1.5 2.8 intron CR44833 - chrX_7_5015001 chrX_5015001 0.43 RAL-804 423 chrX 5201526 5201567 3S18 319 5777 17 41 '6-11 66.63 1.2 7.7 intron,intron CG15465 +,rg + chrX_17_5200001 chrX_5200001 0.35 RAL-804 424 chrX 5365081 5365133 P-element 2864 2 8 52 '5-3 42.62 2.2 2.5 intron SK + chrX_8_5365001 chrX_5365001 0.62 RAL-804 425 chrX 5719225 5719289 pogo 2099 15 6 64 '4-2 68.99 1.6 2.3 intergenic not near genes chrX_6_5715001 chrX_5715001 0.67 RAL-804 426 chrX 5852902 5852975 opus 7496 112 9 73 '4-5 63.84 3.4 2.0 intergenic not near genes chrX_9_5850001 chrX_5850001 0.44 RAL-804 427 chrX 6408207 6408274 roo 408 11 9 67 '4-5 64.18 2.3 2.7 intergenic not near genes chrX_9_6405001 chrX_6405001 0.44 RAL-804 428 chrX 7042845 7042910 Stalker2 7255 7648 5 65 '1-4 63.21 4.9 0.8 intron CG12541 - chrX_5_7040001 chrX_7040001 0.20 RAL-804 429 chrX 7335099 7335148 Tirant 8482 8110 9 49 '2-7 65.11 1.7 3.3 intron,intron CR44357 -,CG1677 - chrX_9_7335001 chrX_7335001 0.22 RAL-804 430 chrX 7860785 7860861 flea 4754 248 9 76 '6-3 69.22 4.5 1.6 intergenic not near genes chrX_9_7860001 chrX_7860001 0.67 RAL-804 431 chrX 8038773 8038788 297 6600 4 4 15 '3-1 64.09 4.3 0.8 3` UTR fs(1)h - chrX_4_8035001 chrX_8035001 0.75 RAL-804 432 chrX 8962499 8962566 mdg3 5483 5251 11 67 '5-6 65.49 2.0 3.7 intron rdgA + chrX_11_8960001 chrX_8960001 0.45 RAL-804 433 chrX 9590132 9590199 roo 396 1 8 67 '2-6 65.17 2.8 2.1 3` UTR CR45542 - chrX_8_9590001 chrX_9590001 0.25 RAL-804 434 chrX 9911378 9911451 roo 8672 409 20 73 '9-11 67.66 4.2 3.8 intergenic CG1986 - chrX_20_9910001 chrX_9910001 0.45 RAL-804 435 chrX 10235097 10235147 hopper 20 1407 11 50 '1-10 65.07 2.9 2.8 3` UTR Hk - chrX_11_10235001 chrX_10235001 0.09 RAL-804 436 chrX 10321717 10321769 412 471 3 10 52 '2-8 62.83 2.2 3.1 intron alpha-Man-I - chrX_10_10320001 chrX_10320001 0.20 RAL-804 437 chrX 10452444 10452492 roo 9046 7 5 48 '4-1 75.68 5.5 0.8 5` UTR CG32683 - chrX_5_10450001 chrX_10450001 0.80 RAL-804 438 chrX 11305678 11305744 Tirant 8494 8112 7 66 '5-2 69.01 1.7 2.6 intergenic not near genes chrX_7_11305001 chrX_11305001 0.71 RAL-804 439 chrX 11632360 11632432 roo 409 8673 11 72 '5-6 64.96 2.7 3.0 intron Ptp10D + chrX_11_11630001 chrX_11630001 0.45 RAL-804 440 chrX 12098699 12098747 roo 399 22 8 48 '7-1 64.26 3.6 1.7 intron,intron CR43960 +,Ten-a + chrX_8_12095001 chrX_12095001 0.88 RAL-804 441 chrX 12138727 12138775 FB 1 27 7 48 '5-2 64.89 1.9 2.4 intron Ten-a + chrX_7_12135001 chrX_12135001 0.71 RAL-804 442 chrX 12190343 12190410 roo 8669 402 6 67 '3-3 63.60 3.8 1.2 intron Ten-a + chrX_6_12190001 chrX_12190001 0.50 RAL-804 443 chrX 12304731 12304809 roo 8662 404 11 78 '6-5 70.18 1.9 3.8 intron Ten-a + chrX_11_12300001 chrX_12300001 0.55 RAL-804 444 chrX 12524442 12524490 Tabor 13 7304 9 48 '7-2 61.09 3.4 2.0 intron CG43921 - chrX_9_12520001 chrX_12520001 0.78 RAL-804 445 chrX 12615470 12615548 roo 8664 406 14 78 '5-9 66.77 1.3 6.1 3` UTR,intron CG2543 +,CR45621 - chrX_14_12615001 chrX_12615001 0.36 RAL-804 446 chrX 12754604 12754674 Tirant 392 5 10 70 '6-4 63.54 3.4 2.3 intergenic CR44619 + chrX_10_12750001 chrX_12750001 0.60 RAL-804 447 chrX 12903209 12903236 P-element 5 2856 9 27 '3-6 45.72 4.5 1.6 intron CG4407 - chrX_9_12900001 chrX_12900001 0.33 RAL-804 448 chrX 13103268 13103345 roo 9070 8667 9 77 '6-3 63.94 1.1 4.3 intron CG43313 - chrX_9_13100001 chrX_13100001 0.67 RAL-804 449 chrX 13592436 13592521 opus 7115 498 12 85 '9-3 65.99 3.2 2.9 3` UTR Tango13 + chrX_12_13590001 chrX_13590001 0.75 RAL-804 450 chrX 13792337 13792410 roo 8670 407 15 73 '9-6 70.21 1.4 6.2 intron inaE + chrX_15_13790001 chrX_13790001 0.60 RAL-804 451 chrX 13820211 13820270 I-element 2 5346 12 59 '10-2 62.27 2.2 3.8 intron Clic - chrX_12_13820001 chrX_13820001 0.83 RAL-804 452 chrX 14144990 14145048 roo 8671 405 10 58 '7-3 61.63 1.7 3.7 intergenic not near genes chrX_10_14140001 chrX_14140001 0.70 RAL-804 453 chrX 15356400 15356422 hobo 6 29 9 22 '4-5 62.41 7.3 1.1 intron acj6 - chrX_9_15355001 chrX_15355001 0.44 RAL-804 454 chrX 15432694 15432769 Burdock 6385 1 10 75 '6-4 66.00 2.8 2.6 intron Cngl - chrX_10_15430001 chrX_15430001 0.60 RAL-804 455 chrX 15486626 15486692 P-element 2885 9 11 66 '6-5 51.26 4.0 2.2 intergenic CG6340 +,Gmap + chrX_11_15485001 chrX_15485001 0.55 RAL-804 456 chrX 15746284 15746305 jockey2 3193 3214 7 21 '4-3 67.45 5.8 1.0 intergenic CG8944 -,Tcp-1zeta + chrX_7_15745001 chrX_15745001 0.57 RAL-804 457 chrX 16417616 16417688 412 8 495 8 72 '3-5 63.78 3.3 1.9 3` UTR AnxB11 - chrX_8_16415001 chrX_16415001 0.38 RAL-804 458 chrX 17177800 17177858 P-element 9 10 7 58 '5-2 52.89 8.5 0.7 5` UTR baz + chrX_7_17175001 chrX_17175001 0.71 RAL-804 459 chrX 17218345 17218422 roo 8664 405 10 77 '3-7 64.42 3.1 2.4 intergenic CG12998 + chrX_10_17215001 chrX_17215001 0.30 RAL-804 460 chrX 17566258 17566302 jockey 4988 4690 9 44 '5-4 55.20 2.5 2.6 intergenic ppk23 - chrX_9_17565001 chrX_17565001 0.56 RAL-804 461 chrX 17672081 17672153 roo 409 7 10 72 '8-2 71.36 5.5 1.5 intergenic CG12990 -,chas - chrX_10_17670001 chrX_17670001 0.80 RAL-804 462 chrX 17796620 17796682 roo 8670 396 13 62 '7-6 63.53 4.4 2.4 intron OdsH + chrX_13_17795001 chrX_17795001 0.54 RAL-804 463 chrX 17971847 17971869 hobo 7 29 8 22 '4-4 64.06 6.3 1.1 intron Sh - chrX_8_17970001 chrX_17970001 0.50 RAL-804 464 chrX 18193721 18193794 hopper 2 1410 14 73 '10-4 63.92 3.4 3.2 intron Frq2 + chrX_14_18190001 chrX_18190001 0.71 RAL-804 465 chrX 18239074 18239396 jockey 4568 4979 10 322 '4-6 64.25 0.7 5.9 intergenic not near genes chrX_10_18235001 chrX_18235001 0.40 RAL-804 466 chrX 18435401 18435467 roo 412 8678 12 66 '4-8 67.38 4.7 2.1 intergenic CG32548 - chrX_12_18435001 chrX_18435001 0.33 RAL-804 467 chrX 18744056 18744123 copia 238 4865 13 67 '4-9 61.91 4.2 2.5 intergenic not near genes chrX_13_18740001 chrX_18740001 0.31 RAL-804 468 chrX 18823866 18823932 springer 14 7519 9 66 '4-5 63.30 4.6 1.6 intron CG42450 + chrX_9_18820001 chrX_18820001 0.44 RAL-804 469 chrX 19607828 19607907 S-element 1715 1712 8 79 '4-4 62.06 4.4 1.5 intron CG14207 + chrX_8_19605001 chrX_19605001 0.50 RAL-804 470 chrX 19789782 19789810 hobo 32 4 7 28 '3-4 65.34 4.1 1.4 intergenic not near genes chrX_7_19785001 chrX_19785001 0.43 RAL-804 471 chrX 19794476 19794548 hopper 1411 1410 15 72 '10-5 62.31 3.3 3.5 intergenic not near genes chrX_15_19790001 chrX_19790001 0.67 RAL-804 472 chrX 20113611 20113672 opus 12 7492 4 61 '2-2 66.89 2.5 1.1 intergenic not near genes chrX_4_20110001 chrX_20110001 0.50 RAL-804 473 chrX 20330414 20330462 P-element 2885 2874 7 48 '5-2 48.72 5.1 1.1 intergenic CG1504 - chrX_7_20330001 chrX_20330001 0.71 RAL-804 474 chrX 20452379 20452449 Transpac 5228 4930 12 70 '6-6 64.39 2.7 3.2 intron CG32506 + chrX_12_20450001 chrX_20450001 0.50 RAL-804 475 chrX 21087604 21087632 mdg3 23 5495 5 28 '4-1 66.10 2.4 1.5 intergenic not near genes chrX_5_21085001 chrX_21085001 0.80 RAL-804 476 chrX 21667907 21667928 gypsy2 25 7 4 21 '3-1 64.32 0.0 4.0 intergenic not near genes chrX_4_21665001 chrX_21665001 0.75 RAL-804 477 chrX 21907787 21907817 accord 384 7200 4 30 '1-3 69.00 0.0 4.0 intergenic not near genes chrX_4_21905001 chrX_21905001 0.25 RAL-804 478 chrX 22806720 22806750 Burdock 6358 252 8 30 '2-6 62.84 1.7 3.0 3` UTR CR45464 - chrX_8_22805001 chrX_22805001 0.25 RAL-804 479 chrX 23043096 23043163 blood 7024 7388 12 67 '5-7 63.45 2.0 4.0 intron CG12061 + chrX_12_23040001 chrX_23040001 0.42 RAL-804 480 chrY 986890 986906 HeT-A 5648 5807 4 16 '2-2 63.86 0.0 4.0 intergenic not near genes chrY_4_985001 chrY_985001 0.50 RAL-804 481 chrY 3481468 3481503 TAHRE 10393 10413 5 35 '2-3 65.41 2.8 1.3 intergenic not near genes chrY_5_3480001 chrY_3480001 0.40 RAL-804 482 chrY 3648861 3648879 springer 363 7519 4 18 '3-1 63.97 1.5 1.6 intergenic not near genes chrY_4_3645001 chrY_3645001 0.75 RAL-804