SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47460 47490 chr2L 52564 52595 jockey 7 5104 1.5 3.5 2.5 2.0 5135 chr2L 47460 intron Cda5 - chr2L 50028 intron Cda5 - chr2L 52595 intron Cda5 - chr2L_7_50001 chr2L_50001 RAL-804 2 chr2L 56918 56941 chr2L 57025 57051 8 109 1.5 1.0 1.2 3.6 133 chr2L 56918 intron Cda5 - chr2L 56984 intron Cda5 - chr2L 57051 intron Cda5 - chr2L_8_55001 chr2L_55001 RAL-804 3 chr2L 89714 89748 chr2L 89791 89824 6 77 3.5 1.5 2.5 1.7 110 chr2L 89714 intergenic not near genes chr2L 89769 intergenic not near genes chr2L 89824 intergenic not near genes chr2L_6_85001 chr2L_85001 RAL-804 4 chr2L 172061 172086 chr2L 172142 172167 6 81 0.5 1.0 0.8 3.3 106 chr2L 172061 intron spen + chr2L 172114 intron spen + chr2L 172167 intron spen + chr2L_6_170001 chr2L_170001 RAL-804 5 chr2L 179459 179483 chr2L 179541 179566 6 82 2.5 1.5 2.0 2.0 107 chr2L 179459 intron spen + chr2L 179512 intron spen + chr2L 179566 intron spen + chr2L_6_175001 chr2L_175001 RAL-804 6 chr2L 297685 297719 chr2L 297785 297793 11 96 3.5 1.5 2.5 3.1 108 chr2L 297685 intergenic Pi3K21B +,Hop + chr2L 297739 intergenic Pi3K21B +,Hop + chr2L 297793 intergenic Pi3K21B +,Hop + chr2L_11_295001 chr2L_295001 RAL-804 7 chr2L 314127 314157 chr2L 314204 314233 9 77 3.0 3.0 3.0 2.2 106 chr2L 314127 intron Plc21C + chr2L 314180 intron Plc21C + chr2L 314233 intron Plc21C + chr2L_9_310001 chr2L_310001 RAL-804 8 chr2L 323453 323481 chr2L 323531 323558 11 76 5.0 1.5 3.2 2.6 105 chr2L 323453 intron Plc21C + chr2L 323506 intron Plc21C + chr2L 323558 intron Plc21C + chr2L_11_320001 chr2L_320001 RAL-804 9 chr2L 325134 325157 chr2L 325211 325219 4 73 4.0 3.5 3.8 0.8 85 chr2L 325134 intron Plc21C + chr2L 325176 intron Plc21C + chr2L 325219 intron Plc21C + chr2L_4_325001 chr2L_325001 RAL-804 10 chr2L 329987 330018 chr2L 330157 330187 10 174 31.0 33.0 32.0 0.3 200 chr2L 329987 intron,3` UTR Plc21C +,CG31921 - chr2L 330087 intron,exon Plc21C +,CG31921 - chr2L 330187 intron,exon Plc21C +,CG31921 - chr2L_10_330001 chr2L_330001 RAL-804 11 chr2L 347890 347919 chr2L 355389 355404 blood 8 7494 1.5 3.0 2.2 2.5 7514 chr2L 347890 3` UTR Plc21C + chr2L 351647 intron Plc21C + chr2L 355404 3` UTR Plc21C + chr2L_8_350001 chr2L_350001 RAL-804 12 chr2L 467356 467491 chr2L 467455 467580 16 90 4.0 4.0 4.0 3.2 224 chr2L 467356 intron CG4297 - chr2L 467468 intron CG4297 - chr2L 467580 intron CG4297 - chr2L_16_465001 chr2L_465001 RAL-804 13 chr2L 666280 666309 chr2L 666356 666385 4 76 1.0 0.0 0.5 2.7 105 chr2L 666280 intron ds - chr2L 666332 intron ds - chr2L 666385 intron ds - chr2L_4_665001 chr2L_665001 RAL-804 14 chr2L 720687 720706 chr2L 722734 722753 8 2046 16.5 27.0 21.8 0.4 2066 chr2L 720687 intergenic not near genes chr2L 721720 intergenic not near genes chr2L 722753 intergenic not near genes chr2L_8_720001 chr2L_720001 RAL-804 15 chr2L 741247 741277 chr2L 744785 744821 11 3539 24.5 13.0 18.8 0.6 3574 chr2L 741247 intron Eaat2 - chr2L 743034 intron Eaat2 - chr2L 744821 intergenic Eaat2 - chr2L_11_740001 chr2L_740001 RAL-804 16 chr2L 753821 753851 chr2L 753910 753940 8 89 2.0 2.5 2.2 2.5 119 chr2L 753821 intron GABA-B-R3 + chr2L 753880 intron GABA-B-R3 + chr2L 753940 intron GABA-B-R3 + chr2L_8_750001 chr2L_750001 RAL-804 17 chr2L 877850 877861 chr2L 877927 877942 5 80 5.0 4.0 4.5 0.9 92 chr2L 877850 3` UTR,exon CG15824 -,ninaA + chr2L 877896 3` UTR,intron CG15824 -,ninaA + chr2L 877942 3` UTR,intron CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-804 18 chr2L 922468 922491 chr2L 922549 922572 4 81 1.0 1.0 1.0 2.0 104 chr2L 922468 intergenic CG4341 + chr2L 922520 intergenic CG4341 + chr2L 922572 intergenic CG4341 + chr2L_4_920001 chr2L_920001 RAL-804 19 chr2L 924591 924605 chr2L 924865 924879 8 273 3.5 1.0 2.2 2.5 288 chr2L 924591 intron CG4341 + chr2L 924735 intron CG4341 + chr2L 924879 intron CG4341 + chr2L_8_920001 chr2L_920001 RAL-804 20 chr2L 936578 936589 chr2L 936668 936679 4 90 0.0 0.5 0.2 3.3 101 chr2L 936578 intron CG4341 + chr2L 936628 intron CG4341 + chr2L 936679 intron CG4341 + chr2L_4_935001 chr2L_935001 RAL-804 21 chr2L 941746 941758 chr2L 941873 941885 5 126 3.0 2.5 2.8 1.3 139 chr2L 941746 intron CG4341 + chr2L 941816 intron CG4341 + chr2L 941885 intron CG4341 + chr2L_5_940001 chr2L_940001 RAL-804 22 chr2L 971915 971939 chr2L 972006 972026 5 87 1.0 2.5 1.8 1.8 111 chr2L 971915 intergenic not near genes chr2L 971970 intergenic not near genes chr2L 972026 intergenic not near genes chr2L_5_970001 chr2L_970001 RAL-804 23 chr2L 976897 976910 chr2L 984533 984546 roo 7 7636 1.5 1.5 1.5 2.8 7649 chr2L 976897 intergenic not near genes chr2L 980722 intergenic not near genes chr2L 984546 intergenic not near genes chr2L_7_980001 chr2L_980001 RAL-804 24 chr2L 1023012 1023034 chr2L 1023092 1023113 11 80 2.0 3.0 2.5 3.1 101 chr2L 1023012 intron IA-2 - chr2L 1023062 intron IA-2 - chr2L 1023113 intron IA-2 - chr2L_11_1020001 chr2L_1020001 RAL-804 25 chr2L 1035557 1035594 chr2L 1035634 1035671 11 77 2.0 2.5 2.2 3.4 114 chr2L 1035557 intron IA-2 - chr2L 1035614 intron IA-2 - chr2L 1035671 intron IA-2 - chr2L_11_1035001 chr2L_1035001 RAL-804 26 chr2L 1156859 1156871 chr2L 1156964 1156976 6 105 6.0 5.0 5.5 0.9 117 chr2L 1156859 intron capt - chr2L 1156918 intron capt - chr2L 1156976 intron capt - chr2L_6_1155001 chr2L_1155001 RAL-804 27 chr2L 1220130 1220161 chr2L 1227596 1227627 blood 13 7466 2.5 2.5 2.5 3.7 7497 chr2L 1220130 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227627 intron CG42329 + chr2L_13_1220001 chr2L_1220001 RAL-804 28 chr2L 1261244 1261260 chr2L 1261323 1261341 5 80 0.0 3.5 1.8 1.8 97 chr2L 1261244 intron robo3 + chr2L 1261292 intron robo3 + chr2L 1261341 intron robo3 + chr2L_5_1260001 chr2L_1260001 RAL-804 29 chr2L 1351397 1351424 chr2L 1351755 1351782 8 356 0.5 1.5 1.0 4.0 385 chr2L 1351397 intergenic CG5556 - chr2L 1351590 intergenic CG5556 - chr2L 1351782 3` UTR CG5556 - chr2L_8_1350001 chr2L_1350001 RAL-804 30 chr2L 1458245 1458262 chr2L 1458322 1458339 6 76 7.5 6.5 7.0 0.8 94 chr2L 1458245 intergenic not near genes chr2L 1458292 intergenic not near genes chr2L 1458339 intergenic not near genes chr2L_6_1455001 chr2L_1455001 RAL-804 31 chr2L 1556990 1557021 chr2L 1557083 1557114 6 93 3.5 1.5 2.5 1.7 124 chr2L 1556990 intron haf + chr2L 1557052 intron haf + chr2L 1557114 intron haf + chr2L_6_1555001 chr2L_1555001 RAL-804 32 chr2L 1570686 1570702 chr2L 1573558 1573574 F-element 6 2872 6.0 2.0 4.0 1.2 2888 chr2L 1570686 intron haf + chr2L 1572130 intron haf + chr2L 1573574 intron haf + chr2L_6_1570001 chr2L_1570001 RAL-804 33 chr2L 1590957 1590986 chr2L 1591033 1591062 10 76 5.0 3.0 4.0 2.0 105 chr2L 1590957 intron haf + chr2L 1591010 intron haf + chr2L 1591062 intron haf + chr2L_10_1590001 chr2L_1590001 RAL-804 34 chr2L 1678998 1679010 chr2L 1686458 1686475 blood 7 7464 0.5 5.5 3.0 1.8 7477 chr2L 1678998 intron chinmo + chr2L 1682736 intron chinmo + chr2L 1686475 intron chinmo + chr2L_7_1680001 chr2L_1680001 RAL-804 35 chr2L 1711354 1711385 chr2L 1711678 1711709 mdg3 14 322 3.5 5.0 4.2 2.7 355 chr2L 1711354 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711532 3` UTR frtz - chr2L 1711709 3` UTR frtz - chr2L_14_1710001 chr2L_1710001 RAL-804 36 chr2L 1721824 1721854 chr2L 1721908 1721918 7 78 0.5 3.0 1.8 2.5 94 chr2L 1721824 intron Rim2 - chr2L 1721871 intron Rim2 - chr2L 1721918 intron Rim2 - chr2L_7_1720001 chr2L_1720001 RAL-804 37 chr2L 1883436 1883447 chr2L 1884016 1884027 4 580 0.0 4.5 2.2 1.2 591 chr2L 1883436 intron CG15358 - chr2L 1883732 intron CG15358 - chr2L 1884027 exon CG15358 - chr2L_4_1880001 chr2L_1880001 RAL-804 38 chr2L 2001779 2001793 chr2L 2001857 2001871 5 77 4.5 3.5 4.0 1.0 92 chr2L 2001779 intron,5` UTR CG33543 -,CR43464 + chr2L 2001825 intron,5` UTR CG33543 -,CR43464 + chr2L 2001871 intron,5` UTR CG33543 -,CR43464 + chr2L_5_2000001 chr2L_2000001 RAL-804 39 chr2L 2016127 2016155 chr2L 2016207 2016235 8 78 4.0 4.0 4.0 1.6 108 chr2L 2016127 intron CG4238 + chr2L 2016181 intron CG4238 + chr2L 2016235 intron CG4238 + chr2L_8_2015001 chr2L_2015001 RAL-804 40 chr2L 2100375 2100408 chr2L 2109525 2109547 roo 13 9146 3.5 2.5 3.0 3.2 9172 chr2L 2100375 intron dpr3 - chr2L 2104961 intron dpr3 - chr2L 2109547 intron dpr3 - chr2L_13_2100001 chr2L_2100001 RAL-804 41 chr2L 2125513 2125515 chr2L 2125855 2125857 4 342 7.0 30.0 18.5 0.2 344 chr2L 2125513 intergenic not near genes chr2L 2125685 intergenic not near genes chr2L 2125857 intergenic not near genes chr2L_4_2125001 chr2L_2125001 RAL-804 42 chr2L 2125512 2125541 chr2L 2125858 2125883 7 344 5.5 30.0 17.8 0.4 371 chr2L 2125512 intergenic not near genes chr2L 2125698 intergenic not near genes chr2L 2125883 intergenic not near genes chr2L_7_2125001 chr2L_2125001 RAL-804 43 chr2L 2205949 2205953 chr2L 2208775 2208778 4 2825 12.5 3.5 8.0 0.4 2829 chr2L 2205949 exon CG31668 - chr2L 2207364 exon CG33124 - chr2L 2208778 intron CG33124 - chr2L_4_2205001 chr2L_2205001 RAL-804 44 chr2L 2260807 2260836 chr2L 2260893 2260922 11 85 2.5 3.5 3.0 2.8 115 chr2L 2260807 intergenic not near genes chr2L 2260864 intergenic not near genes chr2L 2260922 intergenic not near genes chr2L_11_2260001 chr2L_2260001 RAL-804 45 chr2L 2262308 2262335 chr2L 2262385 2262412 4 77 2.0 1.5 1.8 1.4 104 chr2L 2262308 intergenic not near genes chr2L 2262360 intergenic not near genes chr2L 2262412 intergenic not near genes chr2L_4_2260001 chr2L_2260001 RAL-804 46 chr2L 2318880 2318903 chr2L 2318957 2318980 7 75 2.0 2.5 2.2 2.2 100 chr2L 2318880 intron,intron CG9967 -,eys + chr2L 2318930 intron,intron CG9967 -,eys + chr2L 2318980 intron,intron CG9967 -,eys + chr2L_7_2315001 chr2L_2315001 RAL-804 47 chr2L 2372363 2372403 chr2L 2372449 2372483 10 85 0.0 1.5 0.8 5.6 120 chr2L 2372363 intergenic CG3609 - chr2L 2372423 intergenic CG3609 - chr2L 2372483 3` UTR CG3609 - chr2L_10_2370001 chr2L_2370001 RAL-804 48 chr2L 2475673 2475703 chr2L 2475758 2475788 10 84 1.5 3.0 2.2 3.1 115 chr2L 2475673 intergenic not near genes chr2L 2475730 intergenic not near genes chr2L 2475788 intergenic not near genes chr2L_10_2475001 chr2L_2475001 RAL-804 49 chr2L 2587814 2587847 chr2L 2587893 2587923 7 76 1.5 2.0 1.8 2.5 109 chr2L 2587814 intergenic not near genes chr2L 2587868 intergenic not near genes chr2L 2587923 intergenic not near genes chr2L_7_2585001 chr2L_2585001 RAL-804 50 chr2L 2618042 2618059 chr2L 2618121 2618138 10 77 3.5 4.0 3.8 2.1 96 chr2L 2618042 intergenic not near genes chr2L 2618090 intergenic not near genes chr2L 2618138 intergenic not near genes chr2L_10_2615001 chr2L_2615001 RAL-804 51 chr2L 2647890 2647912 chr2L 2648013 2648035 8 120 5.5 3.5 4.5 1.5 145 chr2L 2647890 5` UTR CG43851 + chr2L 2647962 exon CG43851 + chr2L 2648035 exon CG43851 + chr2L_8_2645001 chr2L_2645001 RAL-804 52 chr2L 2698868 2698894 chr2L 2698954 2698979 11 86 2.5 1.0 1.8 3.9 111 chr2L 2698868 intron CG31690 + chr2L 2698924 intron CG31690 + chr2L 2698979 intron CG31690 + chr2L_11_2695001 chr2L_2695001 RAL-804 53 chr2L 2713367 2713373 chr2L 2713451 2713457 4 84 5.0 9.5 7.2 0.5 90 chr2L 2713367 intron CG31690 + chr2L 2713412 intron CG31690 + chr2L 2713457 intron CG31690 + chr2L_4_2710001 chr2L_2710001 RAL-804 54 chr2L 2826537 2826568 chr2L 2826629 2826653 6 89 0.0 3.0 1.5 2.4 116 chr2L 2826537 intron Duox - chr2L 2826595 intron Duox - chr2L 2826653 intron Duox - chr2L_6_2825001 chr2L_2825001 RAL-804 55 chr2L 2837917 2837950 chr2L 2918919 2918955 7 81003 14.0 7.5 10.8 0.6 81038 chr2L 2837917 intergenic CG3119 -,Cpr23B + chr2L 2878436 5` UTR CG31950 + chr2L 2918955 intron lilli + chr2L_7_2875001 chr2L_2875001 RAL-804 56 chr2L 2932449 2932476 chr2L 2932906 2932933 10 457 2.0 4.5 3.2 2.4 484 chr2L 2932449 intron lilli + chr2L 2932691 intron lilli + chr2L 2932933 intron lilli + chr2L_10_2930001 chr2L_2930001 RAL-804 57 chr2L 2937426 2937451 chr2L 2937503 2937527 7 77 2.5 4.5 3.5 1.6 101 chr2L 2937426 intron lilli + chr2L 2937476 intron lilli + chr2L 2937527 intron lilli + chr2L_7_2935001 chr2L_2935001 RAL-804 58 chr2L 3073032 3073064 chr2L 3078235 3078266 copia 12 5203 1.0 6.0 3.5 2.7 5234 chr2L 3073032 intron toc - chr2L 3075649 intron toc - chr2L 3078266 intron toc - chr2L_12_3075001 chr2L_3075001 RAL-804 59 chr2L 3108871 3108899 chr2L 3108948 3108976 8 77 3.0 0.0 1.5 3.2 105 chr2L 3108871 intron toc - chr2L 3108924 intron toc - chr2L 3108976 intron toc - chr2L_8_3105001 chr2L_3105001 RAL-804 60 chr2L 3130805 3130832 chr2L 3131066 3131094 4 262 4.5 4.0 4.2 0.8 289 chr2L 3130805 intron toc - chr2L 3130950 intron toc - chr2L 3131094 intron toc - chr2L_4_3130001 chr2L_3130001 RAL-804 61 chr2L 3202736 3202771 chr2L 3210165 3210200 mdg1 12 7429 1.5 1.5 1.5 4.8 7464 chr2L 3202736 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210200 intergenic CR45336 + chr2L_12_3205001 chr2L_3205001 RAL-804 62 chr2L 3251499 3251513 chr2L 3259064 3259078 springer 4 7565 3.5 2.0 2.8 1.1 7579 chr2L 3251499 intergenic not near genes chr2L 3255288 intergenic not near genes chr2L 3259078 intergenic not near genes chr2L_4_3255001 chr2L_3255001 RAL-804 63 chr2L 3291246 3291269 chr2L 3291325 3291346 9 79 2.5 4.5 3.5 2.0 100 chr2L 3291246 3` UTR CG9664 - chr2L 3291296 3` UTR CG9664 - chr2L 3291346 3` UTR CG9664 - chr2L_9_3290001 chr2L_3290001 RAL-804 64 chr2L 3649789 3649821 chr2L 3654991 3655006 copia 7 5200 1.5 2.5 2.0 2.3 5217 chr2L 3649789 intron for - chr2L 3652398 intron for - chr2L 3655006 intron for - chr2L_7_3650001 chr2L_3650001 RAL-804 65 chr2L 3663311 3663333 chr2L 3663390 3663412 7 79 2.5 3.0 2.8 1.8 101 chr2L 3663311 intron CG34340 + chr2L 3663362 intron CG34340 + chr2L 3663412 intron CG34340 + chr2L_7_3660001 chr2L_3660001 RAL-804 66 chr2L 3702905 3702928 chr2L 3702991 3703014 6 86 1.5 0.0 0.8 3.3 109 chr2L 3702905 5` UTR CR44311 + chr2L 3702960 intergenic CR44311 + chr2L 3703014 intergenic CR44311 + chr2L_6_3700001 chr2L_3700001 RAL-804 67 chr2L 3784809 3784827 chr2L 3785668 3785686 6 859 8.5 14.0 11.2 0.5 877 chr2L 3784809 intergenic CG31960 + chr2L 3785248 exon CG31960 + chr2L 3785686 intergenic CG31958 +,CG31960 + chr2L_6_3785001 chr2L_3785001 RAL-804 68 chr2L 4066040 4066058 chr2L 4068862 4068883 Juan 4 2824 2.5 3.0 2.8 1.1 2843 chr2L 4066040 intron ed + chr2L 4067462 intron ed + chr2L 4068883 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-804 69 chr2L 4082898 4082913 chr2L 4083002 4083016 4 102 10.5 8.0 9.2 0.4 118 chr2L 4082898 intron ed + chr2L 4082957 intron ed + chr2L 4083016 intron ed + chr2L_4_4080001 chr2L_4080001 RAL-804 70 chr2L 4117758 4117782 chr2L 4117840 4117866 4 84 5.0 8.0 6.5 0.5 108 chr2L 4117758 intergenic not near genes chr2L 4117812 intergenic not near genes chr2L 4117866 intergenic not near genes chr2L_4_4115001 chr2L_4115001 RAL-804 71 chr2L 4150629 4150657 chr2L 4150709 4150721 4 68 6.5 6.0 6.2 0.6 92 chr2L 4150629 exon CG2955 + chr2L 4150675 exon CG2955 + chr2L 4150721 exon CG2955 + chr2L_4_4150001 chr2L_4150001 RAL-804 72 chr2L 4155612 4155631 chr2L 4155851 4155871 5 240 6.0 5.0 5.5 0.8 259 chr2L 4155612 intergenic not near genes chr2L 4155742 intergenic not near genes chr2L 4155871 intergenic not near genes chr2L_5_4155001 chr2L_4155001 RAL-804 73 chr2L 4166389 4166409 chr2L 4166472 4166491 5 83 8.5 9.5 9.0 0.5 102 chr2L 4166389 intergenic Or24a - chr2L 4166440 intergenic Or24a - chr2L 4166491 intergenic Or24a - chr2L_5_4165001 chr2L_4165001 RAL-804 74 chr2L 4181292 4181304 chr2L 4183924 4183935 Burdock 5 2632 1.5 3.5 2.5 1.4 2643 chr2L 4181292 intergenic not near genes chr2L 4182614 intergenic not near genes chr2L 4183935 intergenic not near genes chr2L_5_4180001 chr2L_4180001 RAL-804 75 chr2L 4339997 4340018 chr2L 4340083 4340105 8 86 1.5 3.0 2.2 2.5 108 chr2L 4339997 intron Atet + chr2L 4340051 intron Atet + chr2L 4340105 intron Atet + chr2L_8_4340001 chr2L_4340001 RAL-804 76 chr2L 4351472 4351499 chr2L 4351548 4351574 13 75 3.0 3.0 3.0 3.2 102 chr2L 4351472 intergenic CR44700 + chr2L 4351523 intergenic CR44700 + chr2L 4351574 intergenic CR44700 + chr2L_13_4350001 chr2L_4350001 RAL-804 77 chr2L 4356629 4356650 chr2L 4356708 4356729 10 79 3.0 3.0 3.0 2.5 100 chr2L 4356629 intergenic not near genes chr2L 4356679 intergenic not near genes chr2L 4356729 intergenic not near genes chr2L_10_4355001 chr2L_4355001 RAL-804 78 chr2L 4586295 4586319 chr2L 4586378 4586402 4 83 3.0 0.5 1.8 1.4 107 chr2L 4586295 intron dp - chr2L 4586348 intron dp - chr2L 4586402 intron dp - chr2L_4_4585001 chr2L_4585001 RAL-804 79 chr2L 4586320 4586328 chr2L 4586377 4586385 5 63 2.0 0.5 1.2 2.3 65 chr2L 4586320 intron dp - chr2L 4586352 intron dp - chr2L 4586385 intron dp - chr2L_5_4585001 chr2L_4585001 RAL-804 80 chr2L 4601704 4601737 chr2L 4609145 4609178 mdg1 10 7440 3.5 1.5 2.5 2.9 7474 chr2L 4601704 intron dp - chr2L 4605441 intron dp - chr2L 4609178 intron dp - chr2L_10_4605001 chr2L_4605001 RAL-804 81 chr2L 4740090 4740113 chr2L 4740170 4740193 8 80 1.5 0.5 1.0 4.0 103 chr2L 4740090 intron CG15630 - chr2L 4740142 intron CG15630 - chr2L 4740193 intron CG15630 - chr2L_8_4740001 chr2L_4740001 RAL-804 82 chr2L 4819494 4819513 chr2L 4819617 4819636 7 123 3.0 2.5 2.8 1.8 142 chr2L 4819494 intergenic not near genes chr2L 4819565 intergenic not near genes chr2L 4819636 intergenic not near genes chr2L_7_4815001 chr2L_4815001 RAL-804 83 chr2L 4841069 4841102 chr2L 4841145 4841176 4 73 6.5 3.0 4.8 0.7 107 chr2L 4841069 intron CG12194 + chr2L 4841122 intron CG12194 + chr2L 4841176 exon CG12194 + chr2L_4_4840001 chr2L_4840001 RAL-804 84 chr2L 4853732 4853749 chr2L 4853961 4853978 6 229 2.5 2.0 2.2 1.9 246 chr2L 4853732 intron pog + chr2L 4853855 intron pog + chr2L 4853978 intron pog + chr2L_6_4850001 chr2L_4850001 RAL-804 85 chr2L 4869466 4869492 chr2L 4869546 4869572 10 79 3.0 3.0 3.0 2.5 106 chr2L 4869466 intron pog + chr2L 4869519 intron pog + chr2L 4869572 intron pog + chr2L_10_4865001 chr2L_4865001 RAL-804 86 chr2L 4896890 4896924 chr2L 4896970 4897004 10 75 1.5 1.0 1.2 4.5 114 chr2L 4896890 intron CG3036 + chr2L 4896947 intron CG3036 + chr2L 4897004 intron CG3036 + chr2L_10_4895001 chr2L_4895001 RAL-804 87 chr2L 4918167 4918191 chr2L 4923240 4923264 jockey 4 5073 1.0 3.5 2.2 1.2 5097 chr2L 4918167 intron hoe1 - chr2L 4920716 intron hoe1 - chr2L 4923264 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-804 88 chr2L 5027960 5027986 chr2L 5028044 5028070 8 84 1.5 2.5 2.0 2.7 110 chr2L 5027960 intron vkg - chr2L 5028015 intron vkg - chr2L 5028070 intron vkg - chr2L_8_5025001 chr2L_5025001 RAL-804 89 chr2L 5092414 5092433 chr2L 5092501 5092520 4 87 1.0 1.0 1.0 2.0 106 chr2L 5092414 intron pgant5 - chr2L 5092467 intron pgant5 - chr2L 5092520 intron pgant5 - chr2L_4_5090001 chr2L_5090001 RAL-804 90 chr2L 5118706 5118714 chr2L 5119410 5119418 4 704 5.0 2.5 3.8 0.8 712 chr2L 5118706 intron Msp300 + chr2L 5119062 intron Msp300 + chr2L 5119418 intron Msp300 + chr2L_4_5115001 chr2L_5115001 RAL-804 91 chr2L 5118715 5118734 chr2L 5119408 5119438 8 702 1.0 1.5 1.2 3.6 723 chr2L 5118715 intron Msp300 + chr2L 5119076 intron Msp300 + chr2L 5119438 intron Msp300 + chr2L_8_5115001 chr2L_5115001 RAL-804 92 chr2L 5247273 5247288 chr2L 5247828 5247851 5 561 2.5 2.5 2.5 1.4 578 chr2L 5247273 intron tkv - chr2L 5247562 intron tkv - chr2L 5247851 intron tkv - chr2L_5_5245001 chr2L_5245001 RAL-804 93 chr2L 5342515 5342525 chr2L 5342593 5342603 4 78 0.0 2.5 1.2 1.8 88 chr2L 5342515 intergenic CG12512 - chr2L 5342559 intergenic CG12512 - chr2L 5342603 intergenic CG12512 - chr2L_4_5340001 chr2L_5340001 RAL-804 94 chr2L 5458380 5458401 chr2L 5458461 5458479 6 81 3.5 4.5 4.0 1.2 99 chr2L 5458380 intergenic not near genes chr2L 5458430 intergenic not near genes chr2L 5458479 intergenic not near genes chr2L_6_5455001 chr2L_5455001 RAL-804 95 chr2L 5459824 5459852 chr2L 5459910 5459938 12 86 3.0 2.0 2.5 3.4 114 chr2L 5459824 intergenic not near genes chr2L 5459881 intergenic not near genes chr2L 5459938 intergenic not near genes chr2L_12_5455001 chr2L_5455001 RAL-804 96 chr2L 5475157 5475161 chr2L 5475262 5475266 4 105 1.5 3.5 2.5 1.1 109 chr2L 5475157 intergenic not near genes chr2L 5475212 intergenic not near genes chr2L 5475266 intergenic not near genes chr2L_4_5475001 chr2L_5475001 RAL-804 97 chr2L 5508537 5508559 chr2L 5508613 5508635 8 76 4.0 3.0 3.5 1.8 98 chr2L 5508537 intergenic not near genes chr2L 5508586 intergenic not near genes chr2L 5508635 intergenic not near genes chr2L_8_5505001 chr2L_5505001 RAL-804 98 chr2L 5516657 5516686 chr2L 5516736 5516765 7 79 0.0 3.0 1.5 2.8 108 chr2L 5516657 intergenic not near genes chr2L 5516711 intergenic not near genes chr2L 5516765 intergenic not near genes chr2L_7_5515001 chr2L_5515001 RAL-804 99 chr2L 5651401 5651428 chr2L 5651525 5651552 8 124 1.5 1.5 1.5 3.2 151 chr2L 5651401 intron CG31646 - chr2L 5651476 intron CG31646 - chr2L 5651552 intron CG31646 - chr2L_8_5650001 chr2L_5650001 RAL-804 100 chr2L 5676897 5676917 chr2L 5676993 5677013 7 96 0.5 1.0 0.8 3.9 116 chr2L 5676897 intergenic not near genes chr2L 5676955 intergenic not near genes chr2L 5677013 intergenic not near genes chr2L_7_5675001 chr2L_5675001 RAL-804 101 chr2L 5695865 5695890 chr2L 5695957 5695982 4 92 2.5 2.5 2.5 1.1 117 chr2L 5695865 intergenic not near genes chr2L 5695924 intergenic not near genes chr2L 5695982 intergenic not near genes chr2L_4_5695001 chr2L_5695001 RAL-804 102 chr2L 5813666 5813693 chr2L 5813771 5813798 11 105 3.5 5.0 4.2 2.1 132 chr2L 5813666 intergenic not near genes chr2L 5813732 intergenic not near genes chr2L 5813798 intergenic not near genes chr2L_11_5810001 chr2L_5810001 RAL-804 103 chr2L 5827720 5827739 chr2L 5836719 5836732 roo 15 9005 2.5 3.5 3.0 3.8 9012 chr2L 5827720 intron TrissinR + chr2L 5832226 intron TrissinR + chr2L 5836732 intron TrissinR + chr2L_15_5830001 chr2L_5830001 RAL-804 104 chr2L 5839166 5839180 chr2L 5839255 5839269 6 88 3.5 2.0 2.8 1.6 103 chr2L 5839166 intron TrissinR + chr2L 5839218 intron TrissinR + chr2L 5839269 intron TrissinR + chr2L_6_5835001 chr2L_5835001 RAL-804 105 chr2L 5839182 5839197 chr2L 5839248 5839283 8 80 2.5 1.0 1.8 2.9 101 chr2L 5839182 intron TrissinR + chr2L 5839232 intron TrissinR + chr2L 5839283 intron TrissinR + chr2L_8_5835001 chr2L_5835001 RAL-804 106 chr2L 5887601 5887627 chr2L 5887682 5887708 4 81 1.0 2.0 1.5 1.6 107 chr2L 5887601 3` UTR CR44577 - chr2L 5887654 3` UTR CR44577 - chr2L 5887708 3` UTR CR44577 - chr2L_4_5885001 chr2L_5885001 RAL-804 107 chr2L 5904462 5904475 chr2L 5904542 5904555 8 80 1.0 0.0 0.5 5.3 93 chr2L 5904462 intron CG9021 - chr2L 5904508 intron CG9021 - chr2L 5904555 intron CG9021 - chr2L_8_5900001 chr2L_5900001 RAL-804 108 chr2L 6026918 6026954 chr2L 6027002 6027020 4 79 0.0 3.0 1.5 1.6 102 chr2L 6026918 intron CG9109 - chr2L 6026969 intron CG9109 - chr2L 6027020 intron CG9109 - chr2L_4_6025001 chr2L_6025001 RAL-804 109 chr2L 6121475 6121504 chr2L 6121576 6121605 10 100 5.0 4.5 4.8 1.7 130 chr2L 6121475 intron stai + chr2L 6121540 intron stai + chr2L 6121605 intron stai + chr2L_10_6120001 chr2L_6120001 RAL-804 110 chr2L 6363150 6363181 chr2L 6366072 6366103 Burdock 9 2919 3.5 2.5 3.0 2.2 2953 chr2L 6363150 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366103 intergenic not near genes chr2L_9_6360001 chr2L_6360001 RAL-804 111 chr2L 6426877 6426884 chr2L 6445115 6445144 roo 4 18253 5.0 3.0 4.0 0.8 18267 chr2L 6426877 3` UTR CG9527 - chr2L 6436010 intron CG9527 - chr2L 6445144 exon CG9527 - chr2L_4_6435001 chr2L_6435001 RAL-804 112 chr2L 6544374 6544394 chr2L 6544466 6544486 6 92 3.0 5.5 4.2 1.2 112 chr2L 6544374 intron eya - chr2L 6544430 intron eya - chr2L 6544486 intron eya - chr2L_6_6540001 chr2L_6540001 RAL-804 113 chr2L 6590100 6590118 chr2L 6590169 6590195 5 74 5.5 4.5 5.0 0.8 95 chr2L 6590100 intron CG11319 - chr2L 6590148 intron CG11319 - chr2L 6590195 intron CG11319 - chr2L_5_6590001 chr2L_6590001 RAL-804 114 chr2L 6771985 6772014 chr2L 6772072 6772098 5 85 4.0 1.5 2.8 1.3 113 chr2L 6771985 intron CG11321 - chr2L 6772042 intron CG11321 - chr2L 6772098 intron CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-804 115 chr2L 6795224 6795235 chr2L 6795291 6795315 6 72 4.5 2.5 3.5 1.3 91 chr2L 6795224 intron nrv2 - chr2L 6795270 intron nrv2 - chr2L 6795315 intron nrv2 - chr2L_6_6795001 chr2L_6795001 RAL-804 116 chr2L 6833406 6833416 chr2L 6833474 6833476 4 65 3.5 2.0 2.8 1.1 70 chr2L 6833406 intron sens-2 + chr2L 6833441 intron sens-2 + chr2L 6833476 intron sens-2 + chr2L_4_6830001 chr2L_6830001 RAL-804 117 chr2L 6850379 6850410 chr2L 6850462 6850493 6 83 3.5 4.5 4.0 1.2 114 chr2L 6850379 intergenic not near genes chr2L 6850436 intergenic not near genes chr2L 6850493 intergenic not near genes chr2L_6_6850001 chr2L_6850001 RAL-804 118 chr2L 6876780 6876809 chr2L 6882970 6882999 diver 5 6188 7.0 5.5 6.2 0.7 6219 chr2L 6876780 intron Nlg2 + chr2L 6879890 intron Nlg2 + chr2L 6882999 intron Nlg2 + chr2L_5_6875001 chr2L_6875001 RAL-804 119 chr2L 6891454 6891464 chr2L 6891552 6891555 4 96 2.5 2.0 2.2 1.2 101 chr2L 6891454 intron Nlg2 + chr2L 6891504 intron Nlg2 + chr2L 6891555 intron Nlg2 + chr2L_4_6890001 chr2L_6890001 RAL-804 120 chr2L 6950162 6950192 chr2L 6950367 6950397 10 205 3.5 3.0 3.2 2.4 235 chr2L 6950162 5` UTR Gas41 - chr2L 6950280 intergenic Gas41 -,SA + chr2L 6950397 intergenic SA +,Gas41 - chr2L_10_6950001 chr2L_6950001 RAL-804 121 chr2L 7100985 7101016 chr2L 7101210 7101242 11 225 1.5 4.0 2.8 2.9 257 chr2L 7100985 intron Pvf3 - chr2L 7101114 intron Pvf3 - chr2L 7101242 intron Pvf3 - chr2L_11_7100001 chr2L_7100001 RAL-804 122 chr2L 7125789 7125812 chr2L 7125905 7125928 6 116 4.5 0.5 2.5 1.7 139 chr2L 7125789 intron Pvf3 - chr2L 7125858 intron Pvf3 - chr2L 7125928 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-804 123 chr2L 7198008 7198021 chr2L 7198086 7198100 4 79 2.5 4.5 3.5 0.9 92 chr2L 7198008 intron CG4502 - chr2L 7198054 intron CG4502 - chr2L 7198100 intron CG4502 - chr2L_4_7195001 chr2L_7195001 RAL-804 124 chr2L 7343328 7343358 chr2L 7350444 7350474 roo 4 7116 2.0 2.5 2.2 1.2 7146 chr2L 7343328 intron Wnt6 + chr2L 7346901 intron Wnt6 + chr2L 7350474 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-804 125 chr2L 7410667 7410675 chr2L 7410748 7410770 4 91 0.0 2.5 1.2 1.8 103 chr2L 7410667 intergenic CG15818 + chr2L 7410718 intergenic CG15818 + chr2L 7410770 intergenic CG15818 + chr2L_4_7410001 chr2L_7410001 RAL-804 126 chr2L 7436202 7436220 chr2L 7436290 7436308 6 88 2.0 1.5 1.8 2.1 106 chr2L 7436202 intergenic not near genes chr2L 7436255 intergenic not near genes chr2L 7436308 intergenic not near genes chr2L_6_7435001 chr2L_7435001 RAL-804 127 chr2L 7568315 7568332 chr2L 7568392 7568409 4 77 1.0 4.5 2.8 1.1 94 chr2L 7568315 intron RapGAP1 - chr2L 7568362 intron RapGAP1 - chr2L 7568409 intron RapGAP1 - chr2L_4_7565001 chr2L_7565001 RAL-804 128 chr2L 7861311 7861339 chr2L 7861415 7861443 10 103 1.5 0.5 1.0 5.0 132 chr2L 7861311 intergenic TwdlE - chr2L 7861377 intergenic not near genes chr2L 7861443 intergenic not near genes chr2L_10_7860001 chr2L_7860001 RAL-804 129 chr2L 7867567 7867589 chr2L 7867661 7867683 9 94 4.0 0.5 2.2 2.8 116 chr2L 7867567 intron Proc - chr2L 7867625 intron Proc - chr2L 7867683 intron Proc - chr2L_9_7865001 chr2L_7865001 RAL-804 130 chr2L 7922741 7922761 chr2L 7922822 7922842 11 80 3.0 1.5 2.2 3.4 101 chr2L 7922741 intron Snoo - chr2L 7922792 intron Snoo - chr2L 7922842 intron Snoo - chr2L_11_7920001 chr2L_7920001 RAL-804 131 chr2L 7959046 7959073 chr2L 7960456 7960483 pogo 7 1410 1.0 4.0 2.5 2.0 1437 chr2L 7959046 intron Snoo - chr2L 7959764 intron Snoo - chr2L 7960483 intron Snoo - chr2L_7_7955001 chr2L_7955001 RAL-804 132 chr2L 7977091 7977111 chr2L 7984066 7984086 297 9 6975 2.0 2.5 2.2 2.8 6995 chr2L 7977091 intron Snoo - chr2L 7980588 intron Snoo - chr2L 7984086 intron,5` UTR Snoo -,CG7231 + chr2L_9_7980001 chr2L_7980001 RAL-804 133 chr2L 8044105 8044131 chr2L 8044184 8044210 6 79 0.5 5.0 2.8 1.6 105 chr2L 8044105 intron CG7466 + chr2L 8044158 intron CG7466 + chr2L 8044210 intron CG7466 + chr2L_6_8040001 chr2L_8040001 RAL-804 134 chr2L 8184931 8184947 chr2L 8185022 8185038 7 91 2.0 5.5 3.8 1.5 107 chr2L 8184931 intron Piezo + chr2L 8184984 intron Piezo + chr2L 8185038 intron Piezo + chr2L_7_8180001 chr2L_8180001 RAL-804 135 chr2L 8244735 8244742 chr2L 8244857 8244864 4 122 1.0 4.5 2.8 1.1 129 chr2L 8244735 intron CG8086 - chr2L 8244800 intron CG8086 - chr2L 8244864 intron CG8086 - chr2L_4_8240001 chr2L_8240001 RAL-804 136 chr2L 8271620 8271633 chr2L 8271696 8271709 6 76 0.0 0.5 0.2 5.0 89 chr2L 8271620 intron Btk29A - chr2L 8271664 intron Btk29A - chr2L 8271709 intron Btk29A - chr2L_6_8270001 chr2L_8270001 RAL-804 137 chr2L 8535067 8535095 chr2L 8535168 8535200 8 104 1.5 1.5 1.5 3.2 133 chr2L 8535067 intron CG17834 + chr2L 8535134 intron CG17834 + chr2L 8535200 intron CG17834 + chr2L_8_8535001 chr2L_8535001 RAL-804 138 chr2L 8629276 8629299 chr2L 8629353 8629376 7 77 0.0 1.0 0.5 4.7 100 chr2L 8629276 intron Sema-1a + chr2L 8629326 intron Sema-1a + chr2L 8629376 intron Sema-1a + chr2L_7_8625001 chr2L_8625001 RAL-804 139 chr2L 8648047 8648072 chr2L 8648580 8648603 10 534 3.5 1.5 2.5 2.9 556 chr2L 8648047 intron Sema-1a + chr2L 8648325 intron Sema-1a + chr2L 8648603 intron Sema-1a + chr2L_10_8645001 chr2L_8645001 RAL-804 140 chr2L 8723115 8723130 chr2L 8731492 8731507 Tirant 7 8377 3.5 3.5 3.5 1.6 8392 chr2L 8723115 intron raw - chr2L 8727311 intron raw - chr2L 8731507 intron raw - chr2L_7_8725001 chr2L_8725001 RAL-804 141 chr2L 8799808 8799825 chr2L 8799924 8799937 4 115 1.5 7.0 4.2 0.8 129 chr2L 8799808 intergenic not near genes chr2L 8799872 intergenic not near genes chr2L 8799937 intergenic not near genes chr2L_4_8795001 chr2L_8795001 RAL-804 142 chr2L 8815746 8815776 chr2L 8815827 8815856 5 80 1.5 4.0 2.8 1.3 110 chr2L 8815746 intergenic not near genes chr2L 8815801 intergenic not near genes chr2L 8815856 intergenic not near genes chr2L_5_8815001 chr2L_8815001 RAL-804 143 chr2L 8976233 8976256 chr2L 8976325 8976344 5 91 1.5 2.5 2.0 1.7 111 chr2L 8976233 intergenic not near genes chr2L 8976288 intergenic not near genes chr2L 8976344 intergenic not near genes chr2L_5_8975001 chr2L_8975001 RAL-804 144 chr2L 9000283 9000306 chr2L 9007793 9007816 roo 10 7509 6.5 6.0 6.2 1.4 7533 chr2L 9000283 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007816 intergenic not near genes chr2L_10_9000001 chr2L_9000001 RAL-804 145 chr2L 9025822 9025846 chr2L 9025906 9025920 10 83 3.0 4.5 3.8 2.1 98 chr2L 9025822 intron,3` UTR CG9582 -,CR44352 - chr2L 9025871 intron,3` UTR CG9582 -,CR44352 - chr2L 9025920 intron,3` UTR CG9582 -,CR44352 - chr2L_10_9025001 chr2L_9025001 RAL-804 146 chr2L 9095578 9095604 chr2L 9095665 9095691 8 87 3.5 7.5 5.5 1.2 113 chr2L 9095578 intergenic not near genes chr2L 9095634 intergenic not near genes chr2L 9095691 intergenic not near genes chr2L_8_9095001 chr2L_9095001 RAL-804 147 chr2L 9217996 9218003 chr2L 9222780 9222790 Doc 4 4786 2.0 0.0 1.0 2.0 4794 chr2L 9217996 intron tai + chr2L 9220393 intron tai + chr2L 9222790 intron tai + chr2L_4_9220001 chr2L_9220001 RAL-804 148 chr2L 9225090 9225105 chr2L 9225169 9225185 6 78 1.0 2.0 1.5 2.4 95 chr2L 9225090 intron tai + chr2L 9225138 intron tai + chr2L 9225185 intron tai + chr2L_6_9225001 chr2L_9225001 RAL-804 149 chr2L 9264347 9264380 chr2L 9264446 9264480 4 100 2.0 2.0 2.0 1.3 133 chr2L 9264347 intron Ggamma30A + chr2L 9264414 intron Ggamma30A + chr2L 9264480 intron Ggamma30A + chr2L_4_9260001 chr2L_9260001 RAL-804 150 chr2L 9270740 9270762 chr2L 9270834 9270857 10 93 4.0 4.0 4.0 2.0 117 chr2L 9270740 intron Ggamma30A + chr2L 9270798 intron Ggamma30A + chr2L 9270857 intron Ggamma30A + chr2L_10_9270001 chr2L_9270001 RAL-804 151 chr2L 9280009 9280023 chr2L 9280103 9280117 4 94 0.5 4.0 2.2 1.2 108 chr2L 9280009 intron Ggamma30A + chr2L 9280063 intron Ggamma30A + chr2L 9280117 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 RAL-804 152 chr2L 9287324 9287353 chr2L 9287421 9287450 13 97 1.5 2.0 1.8 4.6 126 chr2L 9287324 intron Ggamma30A + chr2L 9287387 intron Ggamma30A + chr2L 9287450 intron Ggamma30A + chr2L_13_9285001 chr2L_9285001 RAL-804 153 chr2L 9297381 9297403 chr2L 9297458 9297480 12 77 3.5 5.0 4.2 2.3 99 chr2L 9297381 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297480 3` UTR Ggamma30A + chr2L_12_9295001 chr2L_9295001 RAL-804 154 chr2L 9300691 9300700 chr2L 9300787 9300796 5 96 0.5 0.0 0.2 4.2 105 chr2L 9300691 3` UTR Ggamma30A + chr2L 9300744 3` UTR Ggamma30A + chr2L 9300796 3` UTR Ggamma30A + chr2L_5_9300001 chr2L_9300001 RAL-804 155 chr2L 9304356 9304511 chr2L 9304440 9304590 9 80 2.0 0.5 1.2 4.1 234 chr2L 9304356 intergenic CR42844 - chr2L 9304473 3` UTR CR42844 - chr2L 9304590 3` UTR CR42844 - chr2L_9_9300001 chr2L_9300001 RAL-804 156 chr2L 9346744 9346774 chr2L 9346833 9346863 4 89 4.0 0.5 2.2 1.2 119 chr2L 9346744 intergenic not near genes chr2L 9346804 intergenic not near genes chr2L 9346863 intergenic not near genes chr2L_4_9345001 chr2L_9345001 RAL-804 157 chr2L 9367033 9367040 chr2L 9367107 9367116 4 74 1.0 6.5 3.8 0.8 83 chr2L 9367033 intergenic not near genes chr2L 9367074 intergenic not near genes chr2L 9367116 intergenic not near genes chr2L_4_9365001 chr2L_9365001 RAL-804 158 chr2L 9391587 9391612 chr2L 9391697 9391722 6 110 0.5 4.5 2.5 1.7 135 chr2L 9391587 intron Shawl - chr2L 9391654 intron Shawl - chr2L 9391722 intron Shawl - chr2L_6_9390001 chr2L_9390001 RAL-804 159 chr2L 9393506 9393528 chr2L 9396473 9396495 jockey 14 2965 5.0 5.0 5.0 2.3 2989 chr2L 9393506 intron Shawl - chr2L 9395000 intron Shawl - chr2L 9396495 intron Shawl - chr2L_14_9395001 chr2L_9395001 RAL-804 160 chr2L 9454982 9454994 chr2L 9455084 9455096 5 102 3.5 2.0 2.8 1.3 114 chr2L 9454982 intron numb + chr2L 9455039 intron numb + chr2L 9455096 intron numb + chr2L_5_9455001 chr2L_9455001 RAL-804 161 chr2L 9456933 9456957 chr2L 9457014 9457038 10 81 1.5 2.0 1.8 3.6 105 chr2L 9456933 intron numb + chr2L 9456986 intron numb + chr2L 9457038 intron numb + chr2L_10_9455001 chr2L_9455001 RAL-804 162 chr2L 9458312 9458323 chr2L 9458619 9458635 5 310 0.0 5.5 2.8 1.3 323 chr2L 9458312 intron numb + chr2L 9458474 intron numb + chr2L 9458635 intron numb + chr2L_5_9455001 chr2L_9455001 RAL-804 163 chr2L 9676396 9676432 chr2L 9676483 9676518 6 87 8.5 13.0 10.8 0.5 122 chr2L 9676396 intergenic not near genes chr2L 9676457 intergenic not near genes chr2L 9676518 intergenic not near genes chr2L_6_9675001 chr2L_9675001 RAL-804 164 chr2L 9685620 9685656 chr2L 9688228 9688264 5 2608 10.0 12.5 11.2 0.4 2644 chr2L 9685620 intron Pka-C1 - chr2L 9686942 intron Pka-C1 - chr2L 9688264 intron Pka-C1 - chr2L_5_9685001 chr2L_9685001 RAL-804 165 chr2L 9730978 9730998 chr2L 9731060 9731079 4 82 5.5 4.0 4.8 0.7 101 chr2L 9730978 intron Nckx30C - chr2L 9731028 intron Nckx30C - chr2L 9731079 intron Nckx30C - chr2L_4_9730001 chr2L_9730001 RAL-804 166 chr2L 9773118 9773151 chr2L 9773235 9773267 10 112 8.0 8.5 8.2 1.1 149 chr2L 9773118 exon ppk11 - chr2L 9773192 exon ppk11 - chr2L 9773267 exon ppk11 - chr2L_10_9770001 chr2L_9770001 RAL-804 167 chr2L 9973727 9973757 chr2L 9980843 9980876 HMS-Beagle 18 7117 5.5 5.5 5.5 2.8 7149 chr2L 9973727 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980876 intergenic not near genes chr2L_18_9975001 chr2L_9975001 RAL-804 168 chr2L 9991184 9991208 chr2L 9991288 9991312 7 102 3.0 1.0 2.0 2.3 128 chr2L 9991184 intron bib + chr2L 9991248 intron bib + chr2L 9991312 intron bib + chr2L_7_9990001 chr2L_9990001 RAL-804 169 chr2L 10051728 10051740 chr2L 10051811 10051821 7 80 3.5 4.0 3.8 1.5 93 chr2L 10051728 5` UTR CR44874 + chr2L 10051774 5` UTR CR44874 + chr2L 10051821 5` UTR CR44874 + chr2L_7_10050001 chr2L_10050001 RAL-804 170 chr2L 10095639 10095663 chr2L 10095719 10095743 5 80 1.5 3.0 2.2 1.6 104 chr2L 10095639 intron CG44153 - chr2L 10095691 intron CG44153 - chr2L 10095743 intron CG44153 - chr2L_5_10095001 chr2L_10095001 RAL-804 171 chr2L 10105280 10105309 chr2L 10105356 10105385 9 76 3.5 2.5 3.0 2.2 105 chr2L 10105280 intron,intron CG44153 -,CG34109 + chr2L 10105332 intron,intron CG44153 -,CG34109 + chr2L 10105385 intron,intron CG44153 -,CG34109 + chr2L_9_10105001 chr2L_10105001 RAL-804 172 chr2L 10156321 10156353 chr2L 10163791 10163819 blood 8 7468 3.5 4.0 3.8 1.7 7498 chr2L 10156321 intron,3` UTR CG44153 -,CG4839 + chr2L 10160070 intron CG44153 - chr2L 10163819 intron CG44153 - chr2L_8_10160001 chr2L_10160001 RAL-804 173 chr2L 10180589 10180604 chr2L 10180676 10180691 4 87 1.0 0.0 0.5 2.7 102 chr2L 10180589 intergenic CG44153 - chr2L 10180640 intergenic CG44153 - chr2L 10180691 intergenic CG44153 - chr2L_4_10180001 chr2L_10180001 RAL-804 174 chr2L 10474389 10474414 chr2L 10474465 10474493 11 80 2.5 1.0 1.8 3.9 104 chr2L 10474389 intergenic RluA-1 - chr2L 10474441 intergenic RluA-1 - chr2L 10474493 intergenic RluA-1 - chr2L_11_10470001 chr2L_10470001 RAL-804 175 chr2L 10480312 10480336 chr2L 10480390 10480412 9 77 2.0 0.0 1.0 4.5 100 chr2L 10480312 intron RluA-2 + chr2L 10480362 intron RluA-2 + chr2L 10480412 intron RluA-2 + chr2L_9_10480001 chr2L_10480001 RAL-804 176 chr2L 10495307 10495459 chr2L 10495384 10495545 7 83 0.0 0.0 0.0 7.0 238 chr2L 10495307 intron Myo31DF - chr2L 10495426 intron Myo31DF - chr2L 10495545 intron Myo31DF - chr2L_7_10495001 chr2L_10495001 RAL-804 177 chr2L 10563914 10563935 chr2L 10564007 10564028 4 92 2.0 0.5 1.2 1.8 114 chr2L 10563914 intron Trim9 + chr2L 10563971 intron Trim9 + chr2L 10564028 intron Trim9 + chr2L_4_10560001 chr2L_10560001 RAL-804 178 chr2L 10592852 10592872 chr2L 10600514 10600534 opus 4 7662 1.0 2.0 1.5 1.6 7682 chr2L 10592852 intron Trim9 + chr2L 10596693 intron Trim9 + chr2L 10600534 intron Trim9 + chr2L_4_10595001 chr2L_10595001 RAL-804 179 chr2L 10640644 10640670 chr2L 10640733 10640756 8 88 4.5 5.0 4.8 1.4 112 chr2L 10640644 exon CG31872 + chr2L 10640700 exon CG31872 + chr2L 10640756 exon CG31872 + chr2L_8_10640001 chr2L_10640001 RAL-804 180 chr2L 10647600 10647622 chr2L 10647725 10647730 4 121 5.5 18.0 11.8 0.3 130 chr2L 10647600 exon CG17097 + chr2L 10647665 exon CG17097 + chr2L 10647730 exon CG17097 + chr2L_4_10645001 chr2L_10645001 RAL-804 181 chr2L 10701725 10701740 chr2L 10701798 10701815 7 78 2.5 5.5 4.0 1.4 90 chr2L 10701725 intergenic Lip1 -,Lip2 - chr2L 10701770 intergenic Lip2 -,Lip1 - chr2L 10701815 intergenic Lip2 -,Lip1 - chr2L_7_10700001 chr2L_10700001 RAL-804 182 chr2L 10740324 10740344 chr2L 10740419 10740439 6 95 4.0 1.5 2.8 1.6 115 chr2L 10740324 3` UTR CG12299 + chr2L 10740382 3` UTR CG12299 + chr2L 10740439 3` UTR CG12299 + chr2L_6_10740001 chr2L_10740001 RAL-804 183 chr2L 10813017 10813049 chr2L 10813104 10813136 6 86 1.5 0.5 1.0 3.0 119 chr2L 10813017 intron Nos - chr2L 10813076 intron Nos - chr2L 10813136 intron Nos - chr2L_6_10810001 chr2L_10810001 RAL-804 184 chr2L 10862849 10862882 chr2L 10864451 10864467 Rt1c 14 1607 1.0 1.5 1.2 6.4 1618 chr2L 10862849 3` UTR CR43807 - chr2L 10863658 intron CR43807 - chr2L 10864467 3` UTR CR43807 - chr2L_14_10860001 chr2L_10860001 RAL-804 185 chr2L 10945074 10945093 chr2L 10945332 10945352 9 259 3.0 1.0 2.0 3.0 278 chr2L 10945074 intron dpr2 - chr2L 10945213 intron dpr2 - chr2L 10945352 intron dpr2 - chr2L_9_10945001 chr2L_10945001 RAL-804 186 chr2L 10946955 10946977 chr2L 10956170 10956190 roo 9 9214 4.0 8.5 6.2 1.2 9235 chr2L 10946955 intron dpr2 - chr2L 10951572 intron dpr2 - chr2L 10956190 intron dpr2 - chr2L_9_10950001 chr2L_10950001 RAL-804 187 chr2L 11056563 11056595 chr2L 11056645 11056677 8 82 0.5 1.5 1.0 4.0 114 chr2L 11056563 intron Samuel - chr2L 11056620 intron Samuel - chr2L 11056677 intron Samuel - chr2L_8_11055001 chr2L_11055001 RAL-804 188 chr2L 11174639 11174659 chr2L 11174715 11174731 6 71 2.5 3.0 2.8 1.6 92 chr2L 11174639 intron Ca-beta - chr2L 11174685 intron Ca-beta - chr2L 11174731 intron Ca-beta - chr2L_6_11170001 chr2L_11170001 RAL-804 189 chr2L 11224065 11224088 chr2L 11224176 11224196 10 111 2.5 0.0 1.2 4.5 131 chr2L 11224065 intron ab + chr2L 11224130 intron ab + chr2L 11224196 intron ab + chr2L_10_11220001 chr2L_11220001 RAL-804 190 chr2L 11249899 11249916 chr2L 11250027 11250044 5 127 7.0 4.0 5.5 0.8 145 chr2L 11249899 intron ab + chr2L 11249972 intron ab + chr2L 11250044 intron ab + chr2L_5_11245001 chr2L_11245001 RAL-804 191 chr2L 11332075 11332078 chr2L 11332161 11332181 4 98 0.5 2.5 1.5 1.6 106 chr2L 11332075 3` UTR CR44584 - chr2L 11332128 3` UTR CR44584 - chr2L 11332181 3` UTR CR44584 - chr2L_4_11330001 chr2L_11330001 RAL-804 192 chr2L 11450122 11450157 chr2L 11450208 11450239 4 84 0.0 2.0 1.0 2.0 117 chr2L 11450122 intergenic not near genes chr2L 11450180 intergenic not near genes chr2L 11450239 intergenic not near genes chr2L_4_11450001 chr2L_11450001 RAL-804 193 chr2L 11536715 11536732 chr2L 11536796 11536804 6 79 2.5 0.0 1.2 2.7 89 chr2L 11536715 3` UTR CG43438 + chr2L 11536760 3` UTR CG43438 + chr2L 11536804 3` UTR CG43438 + chr2L_6_11535001 chr2L_11535001 RAL-804 194 chr2L 11559276 11559302 chr2L 11560062 11560088 7 786 11.0 19.0 15.0 0.4 812 chr2L 11559276 intergenic not near genes chr2L 11559682 intergenic not near genes chr2L 11560088 intergenic not near genes chr2L_7_11555001 chr2L_11555001 RAL-804 195 chr2L 11563648 11563667 chr2L 11568843 11568870 copia 8 5203 2.0 4.5 3.2 1.9 5222 chr2L 11563648 intergenic not near genes chr2L 11566259 intergenic not near genes chr2L 11568870 intergenic not near genes chr2L_8_11565001 chr2L_11565001 RAL-804 196 chr2L 11713505 11713533 chr2L 11720973 11721001 blood 16 7468 3.5 1.5 2.5 4.6 7496 chr2L 11713505 intergenic not near genes chr2L 11717253 intergenic not near genes chr2L 11721001 intergenic CR44143 + chr2L_16_11715001 chr2L_11715001 RAL-804 197 chr2L 11762626 11762647 chr2L 11762713 11762733 9 87 0.5 6.0 3.2 2.1 107 chr2L 11762626 intergenic not near genes chr2L 11762680 intergenic not near genes chr2L 11762733 intergenic not near genes chr2L_9_11760001 chr2L_11760001 RAL-804 198 chr2L 11807227 11807244 chr2L 11807517 11807536 5 288 2.5 1.5 2.0 1.7 309 chr2L 11807227 intron crol - chr2L 11807382 intron crol - chr2L 11807536 intron crol - chr2L_5_11805001 chr2L_11805001 RAL-804 199 chr2L 11820434 11820463 chr2L 11820515 11820544 10 80 2.5 5.5 4.0 2.0 110 chr2L 11820434 intron Pde1c - chr2L 11820489 intron Pde1c - chr2L 11820544 intron Pde1c - chr2L_10_11820001 chr2L_11820001 RAL-804 200 chr2L 11828437 11828465 chr2L 11828513 11828541 5 76 0.5 1.5 1.0 2.5 104 chr2L 11828437 intron,intron Pde1c -,esc - chr2L 11828489 intron,intron Pde1c -,esc - chr2L 11828541 intron,intron Pde1c -,esc - chr2L_5_11825001 chr2L_11825001 RAL-804 201 chr2L 11841351 11841368 chr2L 11841448 11841464 4 97 0.0 0.0 0.0 4.0 113 chr2L 11841351 intron Pde1c - chr2L 11841408 intron Pde1c - chr2L 11841464 intron Pde1c - chr2L_4_11840001 chr2L_11840001 RAL-804 202 chr2L 11870947 11870972 chr2L 11871025 11871033 5 75 0.5 3.0 1.8 1.8 86 chr2L 11870947 intron Pde1c - chr2L 11870990 intron Pde1c - chr2L 11871033 intron Pde1c - chr2L_5_11870001 chr2L_11870001 RAL-804 203 chr2L 12085662 12085687 chr2L 12085734 12085735 6 71 3.5 5.0 4.2 1.2 73 chr2L 12085662 5` UTR,5` UTR prd -,CR44592 + chr2L 12085698 5` UTR,5` UTR prd -,CR44592 + chr2L 12085735 5` UTR,5` UTR prd -,CR44592 + chr2L_6_12085001 chr2L_12085001 RAL-804 204 chr2L 12144202 12144219 chr2L 12146624 12146639 4 2422 3.0 2.5 2.8 1.1 2437 chr2L 12144202 intron CG31760 + chr2L 12145420 intron CG31760 + chr2L 12146639 intron CG31760 + chr2L_4_12145001 chr2L_12145001 RAL-804 205 chr2L 12153934 12153960 chr2L 12154011 12154037 10 77 5.0 3.5 4.2 1.9 103 chr2L 12153934 exon CG31760 + chr2L 12153986 intron CG31760 + chr2L 12154037 intron CG31760 + chr2L_10_12150001 chr2L_12150001 RAL-804 206 chr2L 12157611 12157641 chr2L 12157687 12157720 7 75 1.5 1.5 1.5 2.8 109 chr2L 12157611 intron CG31760 + chr2L 12157666 intron CG31760 + chr2L 12157720 intron CG31760 + chr2L_7_12155001 chr2L_12155001 RAL-804 207 chr2L 12186615 12186647 chr2L 12186697 12186729 12 81 1.5 3.0 2.2 3.8 114 chr2L 12186615 intron aret + chr2L 12186672 intron aret + chr2L 12186729 intron aret + chr2L_12_12185001 chr2L_12185001 RAL-804 208 chr2L 12237967 12237983 chr2L 12238049 12238065 5 82 1.5 1.0 1.2 2.3 98 chr2L 12237967 intron aret + chr2L 12238016 intron aret + chr2L 12238065 intron aret + chr2L_5_12235001 chr2L_12235001 RAL-804 209 chr2L 12305410 12305433 chr2L 12305498 12305521 7 88 2.0 1.5 1.8 2.5 111 chr2L 12305410 intron aret + chr2L 12305466 intron aret + chr2L 12305521 intron aret + chr2L_7_12305001 chr2L_12305001 RAL-804 210 chr2L 12314155 12314180 chr2L 12314236 12314260 7 81 0.0 4.0 2.0 2.3 105 chr2L 12314155 intergenic not near genes chr2L 12314208 intergenic not near genes chr2L 12314260 intergenic not near genes chr2L_7_12310001 chr2L_12310001 RAL-804 211 chr2L 12363191 12363204 chr2L 12363278 12363292 5 88 0.0 5.5 2.8 1.3 101 chr2L 12363191 intron bru-2 + chr2L 12363242 intron bru-2 + chr2L 12363292 intron bru-2 + chr2L_5_12360001 chr2L_12360001 RAL-804 212 chr2L 12454134 12454153 chr2L 12454213 12454231 7 78 4.5 7.0 5.8 1.0 97 chr2L 12454134 intergenic not near genes chr2L 12454182 intergenic not near genes chr2L 12454231 intergenic not near genes chr2L_7_12450001 chr2L_12450001 RAL-804 213 chr2L 12529248 12529447 chr2L 12529381 12529523 11 86 0.5 0.5 0.5 7.3 275 chr2L 12529248 intron bun - chr2L 12529386 intron bun - chr2L 12529523 intron bun - chr2L_11_12525001 chr2L_12525001 RAL-804 214 chr2L 12558321 12558346 chr2L 12565450 12565474 HMS-Beagle 10 7128 3.0 1.5 2.2 3.1 7153 chr2L 12558321 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565474 intergenic not near genes chr2L_10_12560001 chr2L_12560001 RAL-804 215 chr2L 12728920 12728941 chr2L 12729163 12729181 pogo 4 242 4.0 1.0 2.5 1.1 261 chr2L 12728920 intron MRP + chr2L 12729050 intron MRP + chr2L 12729181 intron MRP + chr2L_4_12725001 chr2L_12725001 RAL-804 216 chr2L 12731054 12731086 chr2L 12735821 12735853 F-element 8 4767 3.0 2.5 2.8 2.1 4799 chr2L 12731054 intron MRP + chr2L 12733454 intron MRP + chr2L 12735853 intron MRP + chr2L_8_12730001 chr2L_12730001 RAL-804 217 chr2L 12739175 12739204 chr2L 12743956 12743985 Doc 7 4781 1.5 4.5 3.0 1.8 4810 chr2L 12739175 exon MRP + chr2L 12741580 intron MRP + chr2L 12743985 exon MRP + chr2L_7_12740001 chr2L_12740001 RAL-804 218 chr2L 12751313 12751340 chr2L 12751396 12751423 8 82 2.5 5.5 4.0 1.6 110 chr2L 12751313 intergenic not near genes chr2L 12751368 intergenic not near genes chr2L 12751423 intergenic not near genes chr2L_8_12750001 chr2L_12750001 RAL-804 219 chr2L 12781806 12781815 chr2L 12789249 12789258 Quasimodo 5 7443 5.0 4.5 4.8 0.9 7452 chr2L 12781806 intergenic not near genes chr2L 12785532 intergenic not near genes chr2L 12789258 intergenic not near genes chr2L_5_12785001 chr2L_12785001 RAL-804 220 chr2L 12791606 12791631 chr2L 12795280 12795306 F-element 4 3670 2.5 0.5 1.5 1.6 3700 chr2L 12791606 intergenic not near genes chr2L 12793456 intergenic not near genes chr2L 12795306 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-804 221 chr2L 12861694 12861727 chr2L 12863160 12863182 hobo 10 1465 2.5 2.0 2.2 3.1 1488 chr2L 12861694 intergenic not near genes chr2L 12862438 intergenic not near genes chr2L 12863182 intergenic not near genes chr2L_10_12860001 chr2L_12860001 RAL-804 222 chr2L 12890751 12890774 chr2L 12890838 12890861 9 87 0.0 4.0 2.0 3.0 110 chr2L 12890751 intergenic not near genes chr2L 12890806 intergenic not near genes chr2L 12890861 intergenic not near genes chr2L_9_12890001 chr2L_12890001 RAL-804 223 chr2L 12891947 12891958 chr2L 12892032 12892043 5 85 0.0 3.0 1.5 2.0 96 chr2L 12891947 intergenic not near genes chr2L 12891995 intergenic not near genes chr2L 12892043 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-804 224 chr2L 12894019 12894054 chr2L 12895486 12895520 hobo 5 1464 5.5 6.0 5.8 0.7 1501 chr2L 12894019 intergenic not near genes chr2L 12894770 intergenic not near genes chr2L 12895520 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-804 225 chr2L 12905476 12905507 chr2L 12905560 12905591 4 84 1.5 1.0 1.2 1.8 115 chr2L 12905476 intergenic not near genes chr2L 12905534 intergenic not near genes chr2L 12905591 intergenic not near genes chr2L_4_12905001 chr2L_12905001 RAL-804 226 chr2L 12933848 12933879 chr2L 12941315 12941346 blood 10 7466 5.0 4.5 4.8 1.7 7498 chr2L 12933848 intergenic not near genes chr2L 12937597 intergenic not near genes chr2L 12941346 intergenic not near genes chr2L_10_12935001 chr2L_12935001 RAL-804 227 chr2L 13185321 13185346 chr2L 13185400 13185424 5 79 3.0 4.0 3.5 1.1 103 chr2L 13185321 3` UTR CG16974 - chr2L 13185372 3` UTR CG16974 - chr2L 13185424 exon CG16974 - chr2L_5_13185001 chr2L_13185001 RAL-804 228 chr2L 13204320 13204334 chr2L 13204418 13204433 4 97 10.0 3.0 6.5 0.5 113 chr2L 13204320 intron Pect + chr2L 13204376 intron Pect + chr2L 13204433 intron Pect + chr2L_4_13200001 chr2L_13200001 RAL-804 229 chr2L 13231882 13231915 chr2L 13231993 13232024 5 111 4.5 3.0 3.8 1.0 142 chr2L 13231882 intergenic Prosalpha6T + chr2L 13231953 intergenic Prosalpha6T + chr2L 13232024 intergenic Prosalpha6T + chr2L_5_13230001 chr2L_13230001 RAL-804 230 chr2L 13328546 13328579 chr2L 13328910 13328944 10 364 1.5 1.5 1.5 4.0 398 chr2L 13328546 intron CG43778 - chr2L 13328745 intron CG43778 - chr2L 13328944 intron CG43778 - chr2L_10_13325001 chr2L_13325001 RAL-804 231 chr2L 13398728 13398750 chr2L 13398808 13398830 4 78 1.0 2.0 1.5 1.6 102 chr2L 13398728 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398779 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398830 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_4_13395001 chr2L_13395001 RAL-804 232 chr2L 13405649 13405680 chr2L 13410446 13410477 Doc 12 4796 2.5 3.0 2.8 3.2 4828 chr2L 13405649 exon CG7110 + chr2L 13408063 intron CG7110 + chr2L 13410477 intron CG7110 + chr2L_12_13405001 chr2L_13405001 RAL-804 233 chr2L 13449462 13449496 chr2L 13456898 13456932 Quasimodo 4 7436 0.0 2.0 1.0 2.0 7470 chr2L 13449462 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453197 intron CG42784 + chr2L 13456932 intron CG42784 + chr2L_4_13450001 chr2L_13450001 RAL-804 234 chr2L 13481453 13481475 chr2L 13482060 13482082 jockey 8 607 3.5 3.0 3.2 1.9 629 chr2L 13481453 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482082 intron CG42784 + chr2L_8_13480001 chr2L_13480001 RAL-804 235 chr2L 13672154 13672182 chr2L 13672247 13672248 12 88 3.0 3.5 3.2 2.9 94 chr2L 13672154 exon CG18507 + chr2L 13672201 3` UTR CG18507 + chr2L 13672248 intron CG18507 + chr2L_12_13670001 chr2L_13670001 RAL-804 236 chr2L 13694248 13694271 chr2L 13694354 13694365 5 101 4.0 9.5 6.8 0.6 117 chr2L 13694248 intron CG31814 - chr2L 13694306 intron CG31814 - chr2L 13694365 intron CG31814 - chr2L_5_13690001 chr2L_13690001 RAL-804 237 chr2L 13761807 13761833 chr2L 13762918 13762943 Doc 7 1110 4.0 2.0 3.0 1.8 1136 chr2L 13761807 intron TM9SF4 + chr2L 13762375 intron TM9SF4 + chr2L 13762943 intron TM9SF4 + chr2L_7_13760001 chr2L_13760001 RAL-804 238 chr2L 13853088 13853118 chr2L 13862232 13862268 roo 9 9149 3.0 3.5 3.2 2.1 9180 chr2L 13853088 intron CenG1A + chr2L 13857678 intron CenG1A + chr2L 13862268 intron CenG1A + chr2L_9_13855001 chr2L_13855001 RAL-804 239 chr2L 13865629 13865654 chr2L 13865711 13865727 9 80 4.5 1.5 3.0 2.2 98 chr2L 13865629 intron CenG1A + chr2L 13865678 intron CenG1A + chr2L 13865727 intron CenG1A + chr2L_9_13865001 chr2L_13865001 RAL-804 240 chr2L 14017773 14017795 chr2L 14017865 14017887 7 92 3.5 5.5 4.5 1.3 114 chr2L 14017773 intron bgm + chr2L 14017830 intron bgm + chr2L 14017887 intron bgm + chr2L_7_14015001 chr2L_14015001 RAL-804 241 chr2L 14076220 14076240 chr2L 14076301 14076321 12 80 1.5 2.0 1.8 4.3 101 chr2L 14076220 intron nAChRalpha5 + chr2L 14076270 intron nAChRalpha5 + chr2L 14076321 intron nAChRalpha5 + chr2L_12_14075001 chr2L_14075001 RAL-804 242 chr2L 14246290 14246314 chr2L 14246368 14246392 5 78 0.0 0.0 0.0 5.0 102 chr2L 14246290 intergenic not near genes chr2L 14246341 intergenic not near genes chr2L 14246392 intergenic not near genes chr2L_5_14245001 chr2L_14245001 RAL-804 243 chr2L 14494097 14494119 chr2L 14494461 14494483 5 364 1.5 1.0 1.2 2.3 386 chr2L 14494097 intergenic noc + chr2L 14494290 intergenic noc + chr2L 14494483 intergenic noc + chr2L_5_14490001 chr2L_14490001 RAL-804 244 chr2L 14564207 14564229 chr2L 14564276 14564304 8 68 5.5 4.5 5.0 1.3 97 chr2L 14564207 intergenic CG3473 - chr2L 14564256 intergenic not near genes chr2L 14564304 intergenic not near genes chr2L_8_14560001 chr2L_14560001 RAL-804 245 chr2L 14642569 14642604 chr2L 14651732 14651767 roo 11 9163 2.5 1.5 2.0 3.7 9198 chr2L 14642569 intron osp - chr2L 14647168 intron osp - chr2L 14651767 intron osp - chr2L_11_14645001 chr2L_14645001 RAL-804 246 chr2L 14661256 14661275 chr2L 14661357 14661368 6 102 0.0 1.0 0.5 4.0 112 chr2L 14661256 intron osp - chr2L 14661312 intron osp - chr2L 14661368 intron osp - chr2L_6_14660001 chr2L_14660001 RAL-804 247 chr2L 14707209 14707230 chr2L 14707328 14707348 15 119 3.5 4.5 4.0 3.0 139 chr2L 14707209 intergenic not near genes chr2L 14707278 intergenic not near genes chr2L 14707348 intergenic not near genes chr2L_15_14705001 chr2L_14705001 RAL-804 248 chr2L 14707584 14707615 chr2L 14708589 14708620 4 1005 2.0 14.0 8.0 0.4 1036 chr2L 14707584 intergenic not near genes chr2L 14708102 intergenic not near genes chr2L 14708620 intergenic not near genes chr2L_4_14705001 chr2L_14705001 RAL-804 249 chr2L 14706730 14706763 chr2L 14708992 14709025 4 2262 9.0 20.0 14.5 0.3 2295 chr2L 14706730 intergenic not near genes chr2L 14707878 intergenic not near genes chr2L 14709025 intergenic not near genes chr2L_4_14705001 chr2L_14705001 RAL-804 250 chr2L 14715536 14715566 chr2L 14715627 14715657 11 91 2.0 0.5 1.2 5.0 121 chr2L 14715536 intergenic not near genes chr2L 14715596 intergenic not near genes chr2L 14715657 intergenic not near genes chr2L_11_14715001 chr2L_14715001 RAL-804 251 chr2L 14747547 14747564 chr2L 14747630 14747649 6 85 2.5 3.0 2.8 1.6 102 chr2L 14747547 intergenic not near genes chr2L 14747598 intergenic not near genes chr2L 14747649 intergenic not near genes chr2L_6_14745001 chr2L_14745001 RAL-804 252 chr2L 14787096 14787113 chr2L 14787244 14787261 7 147 2.0 2.0 2.0 2.3 165 chr2L 14787096 intergenic not near genes chr2L 14787178 intergenic not near genes chr2L 14787261 intergenic not near genes chr2L_7_14785001 chr2L_14785001 RAL-804 253 chr2L 14803880 14803910 chr2L 14809083 14809111 copia 9 5203 1.5 4.5 3.0 2.2 5231 chr2L 14803880 intergenic not near genes chr2L 14806496 intergenic not near genes chr2L 14809111 intergenic not near genes chr2L_9_14805001 chr2L_14805001 RAL-804 254 chr2L 14840978 14841010 chr2L 14841065 14841097 9 87 0.0 4.0 2.0 3.0 119 chr2L 14840978 3` UTR CR43805 - chr2L 14841038 3` UTR CR43805 - chr2L 14841097 3` UTR CR43805 - chr2L_9_14840001 chr2L_14840001 RAL-804 255 chr2L 14889952 14889988 chr2L 14890377 14890413 jockey 7 425 3.5 3.5 3.5 1.6 461 chr2L 14889952 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890413 intergenic not near genes chr2L_7_14890001 chr2L_14890001 RAL-804 256 chr2L 14938403 14938430 chr2L 14938497 14938525 6 96 4.0 2.0 3.0 1.5 122 chr2L 14938403 intron CG42313 - chr2L 14938464 intron CG42313 - chr2L 14938525 intron CG42313 - chr2L_6_14935001 chr2L_14935001 RAL-804 257 chr2L 15044730 15044739 chr2L 15044805 15044815 5 76 1.0 0.0 0.5 3.3 85 chr2L 15044730 intergenic ck - chr2L 15044772 intergenic ck - chr2L 15044815 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-804 258 chr2L 15078070 15078098 chr2L 15078157 15078164 4 82 1.5 3.0 2.2 1.2 94 chr2L 15078070 intron CG15270 + chr2L 15078117 intron CG15270 + chr2L 15078164 intron CG15270 + chr2L_4_15075001 chr2L_15075001 RAL-804 259 chr2L 15078623 15078658 chr2L 15078750 15078785 11 127 2.0 1.5 1.8 3.9 162 chr2L 15078623 intron CG15270 + chr2L 15078704 intron CG15270 + chr2L 15078785 intron CG15270 + chr2L_11_15075001 chr2L_15075001 RAL-804 260 chr2L 15127767 15127801 chr2L 15127853 15127887 11 85 3.0 1.5 2.2 3.4 120 chr2L 15127767 intergenic not near genes chr2L 15127827 intergenic not near genes chr2L 15127887 intergenic not near genes chr2L_11_15125001 chr2L_15125001 RAL-804 261 chr2L 15226373 15226393 chr2L 15226448 15226469 5 76 4.0 1.0 2.5 1.4 96 chr2L 15226373 intergenic not near genes chr2L 15226421 intergenic not near genes chr2L 15226469 intergenic not near genes chr2L_5_15225001 chr2L_15225001 RAL-804 262 chr2L 15252990 15253008 chr2L 15253067 15253087 6 79 1.0 2.0 1.5 2.4 97 chr2L 15252990 intron dao + chr2L 15253038 intron dao + chr2L 15253087 intron dao + chr2L_6_15250001 chr2L_15250001 RAL-804 263 chr2L 15446053 15446084 chr2L 15453522 15453552 blood 5 7469 1.5 2.5 2.0 1.7 7499 chr2L 15446053 intergenic not near genes chr2L 15449802 intergenic not near genes chr2L 15453552 intergenic not near genes chr2L_5_15445001 chr2L_15445001 RAL-804 264 chr2L 15510939 15510965 chr2L 15511028 15511059 11 93 0.5 1.5 1.0 5.5 120 chr2L 15510939 intergenic not near genes chr2L 15510999 intergenic not near genes chr2L 15511059 intergenic not near genes chr2L_11_15510001 chr2L_15510001 RAL-804 265 chr2L 15535896 15535916 chr2L 15535986 15536006 6 90 0.0 4.0 2.0 2.0 110 chr2L 15535896 intergenic not near genes chr2L 15535951 intergenic not near genes chr2L 15536006 intergenic not near genes chr2L_6_15535001 chr2L_15535001 RAL-804 266 chr2L 15540933 15540957 chr2L 15541080 15541101 4 146 1.0 3.5 2.2 1.2 168 chr2L 15540933 intergenic not near genes chr2L 15541017 intergenic not near genes chr2L 15541101 intergenic not near genes chr2L_4_15540001 chr2L_15540001 RAL-804 267 chr2L 15574987 15575007 chr2L 15575394 15575417 8 409 0.5 2.5 1.5 3.2 430 chr2L 15574987 intron kek3 + chr2L 15575202 intron kek3 + chr2L 15575417 intron kek3 + chr2L_8_15575001 chr2L_15575001 RAL-804 268 chr2L 15586416 15586438 chr2L 15593468 15593490 297 4 7052 2.0 2.0 2.0 1.3 7074 chr2L 15586416 intergenic not near genes chr2L 15589953 intergenic not near genes chr2L 15593490 intergenic not near genes chr2L_4_15585001 chr2L_15585001 RAL-804 269 chr2L 15947971 15947998 chr2L 15948602 15948629 9 630 2.5 2.0 2.2 2.8 658 chr2L 15947971 intron beat-Ib - chr2L 15948300 intron beat-Ib - chr2L 15948629 intron beat-Ib - chr2L_9_15945001 chr2L_15945001 RAL-804 270 chr2L 15956027 15956045 chr2L 15957494 15957512 hobo 6 1467 2.5 2.0 2.2 1.9 1485 chr2L 15956027 intron beat-Ib - chr2L 15956770 intron beat-Ib - chr2L 15957512 intron beat-Ib - chr2L_6_15955001 chr2L_15955001 RAL-804 271 chr2L 15960853 15960862 chr2L 15961174 15961183 6 321 12.0 3.5 7.8 0.7 330 chr2L 15960853 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961018 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961183 intron,5` UTR beat-Ib -,CR43803 + chr2L_6_15960001 chr2L_15960001 RAL-804 272 chr2L 16027398 16027427 chr2L 16027474 16027503 8 76 2.0 1.0 1.5 3.2 105 chr2L 16027398 intron beat-Ic + chr2L 16027450 intron beat-Ic + chr2L 16027503 intron beat-Ic + chr2L_8_16025001 chr2L_16025001 RAL-804 273 chr2L 16026142 16026178 chr2L 16027902 16027938 12 1760 20.0 16.0 18.0 0.6 1796 chr2L 16026142 intron beat-Ic + chr2L 16027040 intron beat-Ic + chr2L 16027938 intron beat-Ic + chr2L_12_16025001 chr2L_16025001 RAL-804 274 chr2L 16058124 16058141 chr2L 16058265 16058282 4 141 2.5 0.5 1.5 1.6 158 chr2L 16058124 intron beat-Ia + chr2L 16058203 intron beat-Ia + chr2L 16058282 intron beat-Ia + chr2L_4_16055001 chr2L_16055001 RAL-804 275 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 13.0 10.0 11.5 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-804 276 chr2L 9084337 9084340 chr2L 16217660 16217660 8 7133322 11.5 10.0 10.8 0.7 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-804 277 chr2L 16248076 16248104 chr2L 16248172 16248200 4 96 1.5 0.0 0.8 2.2 124 chr2L 16248076 intron PRL-1 - chr2L 16248138 intron PRL-1 - chr2L 16248200 intron PRL-1 - chr2L_4_16245001 chr2L_16245001 RAL-804 278 chr2L 16263994 16264015 chr2L 16264079 16264106 8 87 2.5 2.0 2.2 2.5 112 chr2L 16263994 3` UTR crp - chr2L 16264050 3` UTR crp - chr2L 16264106 3` UTR crp - chr2L_8_16260001 chr2L_16260001 RAL-804 279 chr2L 16280254 16280286 chr2L 16281422 16281440 1360 7 1163 1.0 2.5 1.8 2.5 1186 chr2L 16280254 intron crp - chr2L 16280847 intron crp - chr2L 16281440 intron crp - chr2L_7_16280001 chr2L_16280001 RAL-804 280 chr2L 16550652 16550686 chr2L 16550727 16550762 8 76 7.5 8.5 8.0 0.9 110 chr2L 16550652 intron CG42389 + chr2L 16550707 intron CG42389 + chr2L 16550762 intron CG42389 + chr2L_8_16550001 chr2L_16550001 RAL-804 281 chr2L 16583092 16583125 chr2L 16583180 16583207 5 87 2.5 2.0 2.2 1.6 115 chr2L 16583092 intron CG42389 + chr2L 16583150 intron CG42389 + chr2L 16583207 intron CG42389 + chr2L_5_16580001 chr2L_16580001 RAL-804 282 chr2L 16867027 16867043 chr2L 16867120 16867138 5 94 1.0 2.0 1.5 2.0 111 chr2L 16867027 intergenic not near genes chr2L 16867082 intergenic not near genes chr2L 16867138 intergenic not near genes chr2L_5_16865001 chr2L_16865001 RAL-804 283 chr2L 16934586 16934612 chr2L 16934663 16934692 8 79 7.0 7.0 7.0 1.0 106 chr2L 16934586 intergenic not near genes chr2L 16934639 intergenic not near genes chr2L 16934692 intergenic not near genes chr2L_8_16930001 chr2L_16930001 RAL-804 284 chr2L 16958117 16958129 chr2L 16962905 16962917 Doc 4 4788 1.5 4.5 3.0 1.0 4800 chr2L 16958117 intergenic not near genes chr2L 16960517 intergenic not near genes chr2L 16962917 intergenic not near genes chr2L_4_16960001 chr2L_16960001 RAL-804 285 chr2L 17100742 17100778 chr2L 17100824 17100860 9 80 6.0 7.0 6.5 1.2 118 chr2L 17100742 intergenic not near genes chr2L 17100801 intergenic not near genes chr2L 17100860 intergenic not near genes chr2L_9_17100001 chr2L_17100001 RAL-804 286 chr2L 17101909 17101915 chr2L 17101985 17101991 4 76 1.5 3.0 2.2 1.2 82 chr2L 17101909 intergenic not near genes chr2L 17101950 intergenic not near genes chr2L 17101991 intergenic not near genes chr2L_4_17100001 chr2L_17100001 RAL-804 287 chr2L 17103019 17103037 chr2L 17103107 17103121 7 87 0.5 3.0 1.8 2.5 102 chr2L 17103019 intergenic not near genes chr2L 17103070 intergenic not near genes chr2L 17103121 intergenic not near genes chr2L_7_17100001 chr2L_17100001 RAL-804 288 chr2L 17120857 17120873 chr2L 17120936 17120952 4 79 2.5 4.5 3.5 0.9 95 chr2L 17120857 intergenic not near genes chr2L 17120904 intergenic not near genes chr2L 17120952 intergenic not near genes chr2L_4_17120001 chr2L_17120001 RAL-804 289 chr2L 17158891 17158902 chr2L 17159197 17159221 4 312 5.0 5.5 5.2 0.6 330 chr2L 17158891 intron,intron CG34106 +,beat-IIIa + chr2L 17159056 intron,intron CG34106 +,beat-IIIa + chr2L 17159221 intron,intron CG34106 +,beat-IIIa + chr2L_4_17155001 chr2L_17155001 RAL-804 290 chr2L 17167564 17167591 chr2L 17167805 17167832 pogo 7 241 0.5 3.0 1.8 2.5 268 chr2L 17167564 intron,intron CG34106 +,beat-IIIa + chr2L 17167698 intron,intron CG34106 +,beat-IIIa + chr2L 17167832 intron,intron CG34106 +,beat-IIIa + chr2L_7_17165001 chr2L_17165001 RAL-804 291 chr2L 17273190 17273226 chr2L 17277973 17278009 F-element 7 4780 3.5 1.0 2.2 2.2 4819 chr2L 17273190 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278009 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-804 292 chr2L 17469058 17469078 chr2L 17469308 17469326 7 248 6.0 5.0 5.5 1.1 268 chr2L 17469058 intron BicD - chr2L 17469192 intron BicD - chr2L 17469326 intron BicD - chr2L_7_17465001 chr2L_17465001 RAL-804 293 chr2L 17491857 17491878 chr2L 17491942 17491953 7 81 6.5 5.5 6.0 1.0 96 chr2L 17491857 intron qua - chr2L 17491905 intron qua - chr2L 17491953 intron qua - chr2L_7_17490001 chr2L_17490001 RAL-804 294 chr2L 17503222 17503253 chr2L 17503299 17503330 11 77 10.5 7.5 9.0 1.1 108 chr2L 17503222 intron Dhc36C + chr2L 17503276 intron Dhc36C + chr2L 17503330 intron Dhc36C + chr2L_11_17500001 chr2L_17500001 RAL-804 295 chr2L 17723790 17723801 chr2L 17723883 17723894 4 93 2.5 2.0 2.2 1.2 104 chr2L 17723790 intron CadN - chr2L 17723842 intron CadN - chr2L 17723894 intron CadN - chr2L_4_17720001 chr2L_17720001 RAL-804 296 chr2L 17951949 17951971 chr2L 17953416 17953438 hobo 5 1467 1.5 1.0 1.2 2.3 1489 chr2L 17951949 intergenic CR44398 -,CR44397 - chr2L 17952694 intergenic not near genes chr2L 17953438 intergenic not near genes chr2L_5_17950001 chr2L_17950001 RAL-804 297 chr2L 17986752 17986779 chr2L 17991480 17991507 6 4728 23.0 16.0 19.5 0.3 4755 chr2L 17986752 exon CG5681 + chr2L 17989130 intergenic not near genes chr2L 17991507 3` UTR Prosbeta5R2 + chr2L_6_17985001 chr2L_17985001 RAL-804 298 chr2L 18026985 18027014 chr2L 18027325 18027354 5 340 6.0 6.0 6.0 0.7 369 chr2L 18026985 5` UTR rdo + chr2L 18027170 intron rdo + chr2L 18027354 intron rdo + chr2L_5_18025001 chr2L_18025001 RAL-804 299 chr2L 18111838 18111851 chr2L 18111920 18111933 6 81 4.5 8.0 6.2 0.8 95 chr2L 18111838 intergenic not near genes chr2L 18111886 intergenic not near genes chr2L 18111933 intergenic not near genes chr2L_6_18110001 chr2L_18110001 RAL-804 300 chr2L 18262774 18262792 chr2L 18262893 18262910 6 119 7.5 6.5 7.0 0.8 136 chr2L 18262774 intron CG42750 - chr2L 18262842 intron CG42750 - chr2L 18262910 intron CG42750 - chr2L_6_18260001 chr2L_18260001 RAL-804 301 chr2L 18298936 18298964 chr2L 18299011 18299023 4 71 4.5 2.0 3.2 1.0 87 chr2L 18298936 intergenic not near genes chr2L 18298980 intergenic not near genes chr2L 18299023 intergenic not near genes chr2L_4_18295001 chr2L_18295001 RAL-804 302 chr2L 18364261 18364286 chr2L 18364361 18364385 5 100 4.0 2.5 3.2 1.2 124 chr2L 18364261 intron Fas3 + chr2L 18364323 intron Fas3 + chr2L 18364385 intron Fas3 + chr2L_5_18360001 chr2L_18360001 RAL-804 303 chr2L 18408031 18408050 chr2L 18412815 18412834 Doc 6 4784 6.5 0.0 3.2 1.4 4803 chr2L 18408031 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412834 intergenic not near genes chr2L_6_18410001 chr2L_18410001 RAL-804 304 chr2L 18449383 18449417 chr2L 18449484 18449518 4 101 5.0 5.0 5.0 0.7 135 chr2L 18449383 intergenic bsf -,ncm - chr2L 18449450 intergenic bsf -,ncm - chr2L 18449518 3` UTR bsf - chr2L_4_18445001 chr2L_18445001 RAL-804 305 chr2L 18561555 18561579 chr2L 18561656 18561680 6 100 7.5 7.5 7.5 0.7 125 chr2L 18561555 intron Pde11 - chr2L 18561618 intron Pde11 - chr2L 18561680 intron Pde11 - chr2L_6_18560001 chr2L_18560001 RAL-804 306 chr2L 18790283 18790320 chr2L 18791104 18791140 7 821 14.5 18.5 16.5 0.4 857 chr2L 18790283 intron ham - chr2L 18790712 intron ham - chr2L 18791140 intron ham - chr2L_7_18790001 chr2L_18790001 RAL-804 307 chr2L 18816735 18816770 chr2L 18816867 18816902 6 132 8.5 9.0 8.8 0.6 167 chr2L 18816735 intergenic not near genes chr2L 18816818 intergenic not near genes chr2L 18816902 intergenic not near genes chr2L_6_18815001 chr2L_18815001 RAL-804 308 chr2L 18883859 18883884 chr2L 18883940 18883965 6 82 10.0 12.5 11.2 0.5 106 chr2L 18883859 intergenic not near genes chr2L 18883912 intergenic not near genes chr2L 18883965 intergenic not near genes chr2L_6_18880001 chr2L_18880001 RAL-804 309 chr2L 18902627 18902651 chr2L 18902907 18902932 6 281 0.5 0.0 0.2 5.0 305 chr2L 18902627 intergenic not near genes chr2L 18902780 intergenic not near genes chr2L 18902932 intergenic not near genes chr2L_6_18900001 chr2L_18900001 RAL-804 310 chr2L 18981753 18981775 chr2L 18981829 18981852 4 77 10.5 8.0 9.2 0.4 99 chr2L 18981753 intron Swip-1 - chr2L 18981802 intron Swip-1 - chr2L 18981852 intron Swip-1 - chr2L_4_18980001 chr2L_18980001 RAL-804 311 chr2L 19016251 19016270 chr2L 19016347 19016366 5 96 3.0 5.0 4.0 1.0 115 chr2L 19016251 intergenic not near genes chr2L 19016308 intergenic not near genes chr2L 19016366 intergenic not near genes chr2L_5_19015001 chr2L_19015001 RAL-804 312 chr2L 19147374 19147402 chr2L 19154409 19154437 297 9 7034 2.5 3.5 3.0 2.2 7063 chr2L 19147374 intron brat + chr2L 19150906 intron brat + chr2L 19154437 intron brat + chr2L_9_19150001 chr2L_19150001 RAL-804 313 chr2L 19163374 19163397 chr2L 19163448 19163478 12 80 16.5 12.0 14.2 0.8 104 chr2L 19163374 intron brat + chr2L 19163426 intron brat + chr2L 19163478 intron brat + chr2L_12_19160001 chr2L_19160001 RAL-804 314 chr2L 19228459 19228488 chr2L 19229324 19229353 6 865 7.5 6.5 7.0 0.8 894 chr2L 19228459 intergenic not near genes chr2L 19228906 intergenic not near genes chr2L 19229353 intergenic not near genes chr2L_6_19225001 chr2L_19225001 RAL-804 315 chr2L 19246834 19246839 chr2L 19246914 19246918 4 80 4.5 7.0 5.8 0.6 84 chr2L 19246834 intergenic not near genes chr2L 19246876 intergenic not near genes chr2L 19246918 intergenic not near genes chr2L_4_19245001 chr2L_19245001 RAL-804 316 chr2L 19340201 19340210 chr2L 19340278 19340286 4 76 11.5 6.5 9.0 0.4 85 chr2L 19340201 exon dnt - chr2L 19340244 exon dnt - chr2L 19340286 exon dnt - chr2L_4_19340001 chr2L_19340001 RAL-804 317 chr2L 19342959 19342989 chr2L 19343044 19343074 9 85 7.0 5.5 6.2 1.2 115 chr2L 19342959 intron dnt - chr2L 19343016 intron dnt - chr2L 19343074 intron dnt - chr2L_9_19340001 chr2L_19340001 RAL-804 318 chr2L 19345012 19345040 chr2L 19357221 19357249 blood 6 12209 3.5 2.5 3.0 1.5 12237 chr2L 19345012 intron dnt - chr2L 19351130 intron dnt - chr2L 19357249 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-804 319 chr2L 19357545 19357559 chr2L 19357635 19357649 6 90 6.5 2.5 4.5 1.1 104 chr2L 19357545 intron dnt - chr2L 19357597 intron dnt - chr2L 19357649 intron dnt - chr2L_6_19355001 chr2L_19355001 RAL-804 320 chr2L 19380511 19380528 chr2L 19380591 19380608 6 80 7.0 8.5 7.8 0.7 97 chr2L 19380511 intergenic CG17350 + chr2L 19380560 intergenic CG17350 + chr2L 19380608 intergenic CG17350 + chr2L_6_19380001 chr2L_19380001 RAL-804 321 chr2L 19384000 19384018 chr2L 19384090 19384119 6 91 3.0 3.0 3.0 1.5 119 chr2L 19384000 exon fon - chr2L 19384060 exon fon - chr2L 19384119 exon fon - chr2L_6_19380001 chr2L_19380001 RAL-804 322 chr2L 19560004 19560037 chr2L 19560257 19560289 9 252 2.5 4.5 3.5 2.0 285 chr2L 19560004 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560289 intron Tep5 + chr2L_9_19560001 chr2L_19560001 RAL-804 323 chr2L 19560835 19560859 chr2L 19560915 19560939 6 80 4.0 0.0 2.0 2.0 104 chr2L 19560835 intron Tep5 + chr2L 19560887 exon Tep5 + chr2L 19560939 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-804 324 chr2L 19561343 19561368 chr2L 19561484 19561509 10 140 1.0 4.5 2.8 2.6 166 chr2L 19561343 exon Tep5 + chr2L 19561426 exon Tep5 + chr2L 19561509 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-804 325 chr2L 19620098 19620125 chr2L 19621080 19621113 jockey 8 987 8.0 2.5 5.2 1.3 1015 chr2L 19620098 intron Lar + chr2L 19620606 intron Lar + chr2L 19621113 intron Lar + chr2L_8_19620001 chr2L_19620001 RAL-804 326 chr2L 19652571 19652600 chr2L 19674005 19674034 opus 14 21434 3.5 2.5 3.0 3.5 21463 chr2L 19652571 intron Lar + chr2L 19663302 intron Lar + chr2L 19674034 intron Lar + chr2L_14_19660001 chr2L_19660001 RAL-804 327 chr2L 19703539 19703566 chr2L 19712675 19712702 roo 8 9135 5.0 4.5 4.8 1.4 9163 chr2L 19703539 intron Lar + chr2L 19708120 intron Lar + chr2L 19712702 intron Lar + chr2L_8_19705001 chr2L_19705001 RAL-804 328 chr2L 19741142 19741175 chr2L 19741369 19741400 5 226 14.0 14.5 14.2 0.3 258 chr2L 19741142 intergenic not near genes chr2L 19741271 intergenic not near genes chr2L 19741400 intergenic not near genes chr2L_5_19740001 chr2L_19740001 RAL-804 329 chr2L 19762808 19762840 chr2L 19763050 19763082 pogo 7 242 1.0 1.5 1.2 3.2 274 chr2L 19762808 5` UTR fbp - chr2L 19762945 intron fbp - chr2L 19763082 intron fbp - chr2L_7_19760001 chr2L_19760001 RAL-804 330 chr2L 19824021 19824041 chr2L 19824165 19824185 6 144 6.5 7.0 6.8 0.8 164 chr2L 19824021 intron sick + chr2L 19824103 intron sick + chr2L 19824185 intron sick + chr2L_6_19820001 chr2L_19820001 RAL-804 331 chr2L 19837279 19837310 chr2L 19837359 19837390 10 80 3.0 4.5 3.8 2.1 111 chr2L 19837279 intron sick + chr2L 19837334 intron sick + chr2L 19837390 intron sick + chr2L_10_19835001 chr2L_19835001 RAL-804 332 chr2L 19846247 19846276 chr2L 19846328 19846357 5 81 4.5 5.5 5.0 0.8 110 chr2L 19846247 intron sick + chr2L 19846302 intron sick + chr2L 19846357 intron sick + chr2L_5_19845001 chr2L_19845001 RAL-804 333 chr2L 19911301 19911324 chr2L 19911384 19911412 7 86 8.0 9.5 8.8 0.7 111 chr2L 19911301 intron,3` UTR sick +,CR43097 - chr2L 19911356 intron,3` UTR sick +,CR43097 - chr2L 19911412 intron,3` UTR sick +,CR43097 - chr2L_7_19910001 chr2L_19910001 RAL-804 334 chr2L 19994664 19994681 chr2L 19994732 19994734 5 70 1.0 3.5 2.2 1.6 70 chr2L 19994664 intron CG43861 - chr2L 19994699 intron CG43861 - chr2L 19994734 intron CG43861 - chr2L_5_19990001 chr2L_19990001 RAL-804 335 chr2L 20041432 20041461 chr2L 20041517 20041546 12 84 11.5 13.0 12.2 0.9 114 chr2L 20041432 intron sNPF + chr2L 20041489 intron sNPF + chr2L 20041546 intron sNPF + chr2L_12_20040001 chr2L_20040001 RAL-804 336 chr2L 20296506 20296537 chr2L 20296587 20296618 7 81 1.0 2.5 1.8 2.5 112 chr2L 20296506 intergenic CR43414 - chr2L 20296562 intergenic CR43414 - chr2L 20296618 intergenic CR43414 - chr2L_7_20295001 chr2L_20295001 RAL-804 337 chr2L 20299425 20299445 chr2L 20299540 20299559 5 117 0.0 4.0 2.0 1.7 134 chr2L 20299425 intergenic not near genes chr2L 20299492 intergenic not near genes chr2L 20299559 intergenic not near genes chr2L_5_20295001 chr2L_20295001 RAL-804 338 chr2L 20310882 20310921 chr2L 20310960 20311000 7 79 1.0 3.0 2.0 2.3 118 chr2L 20310882 intergenic spir + chr2L 20310941 intergenic spir + chr2L 20311000 intergenic spir + chr2L_7_20310001 chr2L_20310001 RAL-804 339 chr2L 20553186 20553217 chr2L 20553262 20553293 5 76 4.5 3.5 4.0 1.0 107 chr2L 20553186 intergenic not near genes chr2L 20553240 intergenic not near genes chr2L 20553293 intergenic not near genes chr2L_5_20550001 chr2L_20550001 RAL-804 340 chr2L 20576217 20576245 chr2L 20583685 20583709 blood 10 7466 6.5 1.5 4.0 2.0 7492 chr2L 20576217 intergenic CR45347 + chr2L 20579963 intergenic not near genes chr2L 20583709 3` UTR CR44909 - chr2L_10_20575001 chr2L_20575001 RAL-804 341 chr2L 20639511 20639532 chr2L 20639786 20639806 INE-1 4 275 3.5 4.5 4.0 0.8 295 chr2L 20639511 intergenic not near genes chr2L 20639658 intergenic CG31680 + chr2L 20639806 intergenic CG31680 + chr2L_4_20635001 chr2L_20635001 RAL-804 342 chr2L 20668702 20668721 chr2L 20668778 20668797 4 76 4.0 5.5 4.8 0.7 95 chr2L 20668702 intron CG31678 - chr2L 20668750 intron CG31678 - chr2L 20668797 intron CG31678 - chr2L_4_20665001 chr2L_20665001 RAL-804 343 chr2L 20976654 20976667 chr2L 20981469 20981482 X-element 4 4814 1.5 2.0 1.8 1.4 4828 chr2L 20976654 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981482 intron CG42238 - chr2L_4_20975001 chr2L_20975001 RAL-804 344 chr2L 20984613 20984770 chr2L 20984694 20984862 7 84 6.5 10.5 8.5 0.7 249 chr2L 20984613 intron CG42238 - chr2L 20984738 intron CG42238 - chr2L 20984862 intron CG42238 - chr2L_7_20980001 chr2L_20980001 RAL-804 345 chr2L 21041137 21041160 chr2L 21049398 21049421 Tirant 7 8261 2.0 3.0 2.5 2.0 8284 chr2L 21041137 intron CG42238 - chr2L 21045279 intron CG42238 - chr2L 21049421 intron CG42238 - chr2L_7_21045001 chr2L_21045001 RAL-804 346 chr2L 21074917 21074949 chr2L 21075008 21075040 4 90 1.5 3.0 2.2 1.2 123 chr2L 21074917 intergenic tadr + chr2L 21074978 intergenic tadr + chr2L 21075040 intergenic tadr + chr2L_4_21070001 chr2L_21070001 RAL-804 347 chr2L 21111640 21111674 chr2L 21112047 21112081 9 407 4.0 7.0 5.5 1.4 441 chr2L 21111640 intron Nhe2 + chr2L 21111860 intron Nhe2 + chr2L 21112081 intron Nhe2 + chr2L_9_21110001 chr2L_21110001 RAL-804 348 chr2L 21284057 21284078 chr2L 21284530 21284549 4 472 8.5 5.0 6.8 0.5 492 chr2L 21284057 intergenic not near genes chr2L 21284303 intergenic not near genes chr2L 21284549 intergenic not near genes chr2L_4_21280001 chr2L_21280001 RAL-804 349 chr2L 21285634 21285662 chr2L 21285732 21285759 8 97 14.0 9.5 11.8 0.6 125 chr2L 21285634 intergenic Mio - chr2L 21285696 intergenic Mio - chr2L 21285759 intergenic Mio - chr2L_8_21285001 chr2L_21285001 RAL-804 350 chr2L 21286605 21286634 chr2L 21286683 21286712 7 78 3.0 1.5 2.2 2.2 107 chr2L 21286605 exon Mio - chr2L 21286658 intron Mio - chr2L 21286712 intron Mio - chr2L_7_21285001 chr2L_21285001 RAL-804 351 chr2L 21597027 21597056 chr2L 21604771 21604800 roo 5 7743 1.0 0.5 0.8 2.8 7773 chr2L 21597027 intergenic not near genes chr2L 21600914 intergenic not near genes chr2L 21604800 intergenic not near genes chr2L_5_21600001 chr2L_21600001 RAL-804 352 chr2L 21981685 21981716 chr2L 21990850 21990881 roo 7 9165 1.5 3.5 2.5 2.0 9196 chr2L 21981685 exon CG2528 - chr2L 21986283 intron CG2528 - chr2L 21990881 exon CG2528 - chr2L_7_21985001 chr2L_21985001 RAL-804 353 chr2L 22011923 22011946 chr2L 22012004 22012027 7 81 7.0 5.0 6.0 1.0 104 chr2L 22011923 intergenic not near genes chr2L 22011975 intergenic not near genes chr2L 22012027 intergenic not near genes chr2L_7_22010001 chr2L_22010001 RAL-804 354 chr2L 22077295 22077312 chr2L 22077376 22077392 4 81 2.5 5.5 4.0 0.8 97 chr2L 22077295 intergenic not near genes chr2L 22077344 intergenic not near genes chr2L 22077392 intergenic not near genes chr2L_4_22075001 chr2L_22075001 RAL-804 355 chr2L 22212138 22212161 chr2L 22212685 22212708 4 547 0.5 1.0 0.8 2.2 570 chr2L 22212138 intron Ir40a - chr2L 22212423 intron Ir40a - chr2L 22212708 intron Ir40a - chr2L_4_22210001 chr2L_22210001 RAL-804 356 chr2L 22239427 22239453 chr2L 22239508 22239523 7 79 8.5 8.5 8.5 0.7 96 chr2L 22239427 3` UTR CR43765 - chr2L 22239475 3` UTR CR43765 - chr2L 22239523 3` UTR CR43765 - chr2L_7_22235001 chr2L_22235001 RAL-804 357 chr2L 22983940 22983969 chr2L 22984016 22984026 7 68 4.5 2.0 3.2 1.7 86 chr2L 22983940 intron cta + chr2L 22983983 intron cta + chr2L 22984026 intron cta + chr2L_7_22980001 chr2L_22980001 RAL-804 358 chr2R 552751 552789 chr2R 553969 553998 1360 5 1216 2.5 6.0 4.2 1.0 1247 chr2R 552751 intron CG40378 + chr2R 553374 intron CG40378 + chr2R 553998 intron CG40378 + chr2R_5_550001 chr2R_550001 RAL-804 359 chr2R 1365861 1365894 chr2R 1365973 1366001 11 110 4.5 2.5 3.5 2.4 140 chr2R 1365861 intron l(2)41Ab + chr2R 1365931 intron l(2)41Ab + chr2R 1366001 intron l(2)41Ab + chr2R_11_1365001 chr2R_1365001 RAL-804 360 chr2R 2508317 2508332 chr2R 2508454 2508470 4 138 7.5 8.5 8.0 0.4 153 chr2R 2508317 intron MFS17 - chr2R 2508394 intron MFS17 - chr2R 2508470 intron MFS17 - chr2R_4_2505001 chr2R_2505001 RAL-804 361 chr2R 4312953 4312986 chr2R 4313037 4313070 7 84 8.0 9.0 8.5 0.7 117 chr2R 4312953 intergenic not near genes chr2R 4313012 intergenic not near genes chr2R 4313070 intergenic not near genes chr2R_7_4310001 chr2R_4310001 RAL-804 362 chr2R 4621323 4621345 chr2R 4621863 4621885 4 539 7.0 5.5 6.2 0.6 562 chr2R 4621323 3` UTR CR44101 - chr2R 4621604 3` UTR CR44101 - chr2R 4621885 3` UTR CR44101 - chr2R_4_4620001 chr2R_4620001 RAL-804 363 chr2R 4622950 4622978 chr2R 4624109 4624137 1360 6 1159 5.0 2.5 3.8 1.2 1187 chr2R 4622950 intergenic CR44101 - chr2R 4623544 intergenic not near genes chr2R 4624137 intergenic not near genes chr2R_6_4620001 chr2R_4620001 RAL-804 364 chr2R 4688104 4688132 chr2R 4688197 4688225 7 93 0.5 0.5 0.5 4.7 121 chr2R 4688104 intergenic not near genes chr2R 4688164 intergenic not near genes chr2R 4688225 intergenic not near genes chr2R_7_4685001 chr2R_4685001 RAL-804 365 chr2R 4716259 4716293 chr2R 4716352 4716386 9 88 3.0 5.5 4.2 1.7 127 chr2R 4716259 intron Nipped-B - chr2R 4716322 intron Nipped-B - chr2R 4716386 intron Nipped-B - chr2R_9_4715001 chr2R_4715001 RAL-804 366 chr2R 4838873 4838887 chr2R 4840396 4840410 transib2 5 1523 8.0 5.5 6.8 0.6 1537 chr2R 4838873 intergenic not near genes chr2R 4839642 intergenic not near genes chr2R 4840410 intergenic not near genes chr2R_5_4835001 chr2R_4835001 RAL-804 367 chr2R 4933361 4933381 chr2R 4933925 4933945 4 562 7.0 11.0 9.0 0.4 584 chr2R 4933361 intron Ir41a + chr2R 4933653 intron Ir41a + chr2R 4933945 intron Ir41a + chr2R_4_4930001 chr2R_4930001 RAL-804 368 chr2R 4933382 4933391 chr2R 4933921 4933955 4 553 8.0 9.0 8.5 0.4 573 chr2R 4933382 intron Ir41a + chr2R 4933668 intron Ir41a + chr2R 4933955 intron Ir41a + chr2R_4_4930001 chr2R_4930001 RAL-804 369 chr2R 5019290 5019305 chr2R 5019376 5019391 4 86 5.0 8.5 6.8 0.5 101 chr2R 5019290 intron Ir41a + chr2R 5019340 intron Ir41a + chr2R 5019391 intron Ir41a + chr2R_4_5015001 chr2R_5015001 RAL-804 370 chr2R 5062792 5062799 chr2R 5062870 5062893 6 91 7.0 9.5 8.2 0.7 101 chr2R 5062792 intergenic not near genes chr2R 5062842 intergenic not near genes chr2R 5062893 intergenic not near genes chr2R_6_5060001 chr2R_5060001 RAL-804 371 chr2R 5075346 5075374 chr2R 5075762 5075789 4 415 1.0 2.0 1.5 1.6 443 chr2R 5075346 intergenic not near genes chr2R 5075568 intergenic not near genes chr2R 5075789 intergenic not near genes chr2R_4_5075001 chr2R_5075001 RAL-804 372 chr2R 5080796 5080818 chr2R 5080882 5080909 10 89 2.0 2.5 2.2 3.1 113 chr2R 5080796 intergenic not near genes chr2R 5080852 intergenic not near genes chr2R 5080909 intergenic not near genes chr2R_10_5080001 chr2R_5080001 RAL-804 373 chr2R 5125250 5125269 chr2R 5125567 5125591 9 318 1.0 1.5 1.2 4.1 341 chr2R 5125250 intron gus - chr2R 5125420 intron gus - chr2R 5125591 intron gus - chr2R_9_5125001 chr2R_5125001 RAL-804 374 chr2R 5209779 5209793 chr2R 5210312 5210325 4 533 6.5 1.5 4.0 0.8 546 chr2R 5209779 intron Nipped-A - chr2R 5210052 intron Nipped-A - chr2R 5210325 intron Nipped-A - chr2R_4_5210001 chr2R_5210001 RAL-804 375 chr2R 5417998 5418024 chr2R 5420630 5420656 Burdock 7 2632 0.5 1.5 1.0 3.5 2658 chr2R 5417998 intron laccase2 + chr2R 5419327 intron laccase2 + chr2R 5420656 intron laccase2 + chr2R_7_5415001 chr2R_5415001 RAL-804 376 chr2R 5455778 5455796 chr2R 5455853 5455861 5 74 10.0 10.0 10.0 0.5 83 chr2R 5455778 3` UTR laccase2 + chr2R 5455820 3` UTR laccase2 + chr2R 5455861 3` UTR laccase2 + chr2R_5_5455001 chr2R_5455001 RAL-804 377 chr2R 5463250 5463277 chr2R 5468697 5468724 5 5447 10.5 6.0 8.2 0.5 5474 chr2R 5463250 intergenic not near genes chr2R 5465987 intergenic not near genes chr2R 5468724 intron CG30440 - chr2R_5_5465001 chr2R_5465001 RAL-804 378 chr2R 5472364 5472392 chr2R 5472459 5472472 4 91 13.0 16.0 14.5 0.3 108 chr2R 5472364 intron CG30440 - chr2R 5472418 intron CG30440 - chr2R 5472472 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-804 379 chr2R 5491714 5491733 chr2R 5491855 5491874 4 141 14.5 12.0 13.2 0.3 160 chr2R 5491714 intron CG30440 - chr2R 5491794 intron CG30440 - chr2R 5491874 intron CG30440 - chr2R_4_5490001 chr2R_5490001 RAL-804 380 chr2R 5537514 5537536 chr2R 5537633 5537655 9 117 5.0 4.0 4.5 1.6 141 chr2R 5537514 intron CG30438 + chr2R 5537584 intron CG30438 + chr2R 5537655 intron CG30438 + chr2R_9_5535001 chr2R_5535001 RAL-804 381 chr2R 5543204 5543218 chr2R 5547288 5547302 invader1 5 4084 0.0 2.5 1.2 2.3 4098 chr2R 5543204 intron CG30438 + chr2R 5545253 intron CG30438 + chr2R 5547302 intron CG30438 + chr2R_5_5545001 chr2R_5545001 RAL-804 382 chr2R 5581406 5581425 chr2R 5627615 5627633 4 46209 0.0 6.5 3.2 1.0 46227 chr2R 5581406 intergenic not near genes chr2R 5604520 intron Fis1 - chr2R 5627633 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-804 383 chr2R 5794243 5794263 chr2R 5794368 5794391 7 125 11.5 4.5 8.0 0.8 148 chr2R 5794243 intergenic not near genes chr2R 5794317 intergenic not near genes chr2R 5794391 intergenic not near genes chr2R_7_5790001 chr2R_5790001 RAL-804 384 chr2R 5869277 5869303 chr2R 5874353 5874379 flea 9 5075 1.5 2.0 1.8 3.2 5102 chr2R 5869277 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874379 intergenic not near genes chr2R_9_5870001 chr2R_5870001 RAL-804 385 chr2R 5876867 5876903 chr2R 5876968 5876971 7 97 5.0 3.0 4.0 1.4 104 chr2R 5876867 intergenic not near genes chr2R 5876919 intergenic not near genes chr2R 5876971 intergenic not near genes chr2R_7_5875001 chr2R_5875001 RAL-804 386 chr2R 5878927 5878957 chr2R 5879006 5879037 7 78 1.0 1.5 1.2 3.2 110 chr2R 5878927 intergenic CG44438 - chr2R 5878982 intergenic CG44438 - chr2R 5879037 intergenic CG44438 - chr2R_7_5875001 chr2R_5875001 RAL-804 387 chr2R 5991945 5991966 chr2R 5992033 5992053 6 88 2.5 3.0 2.8 1.6 108 chr2R 5991945 intron Src42A + chr2R 5991999 intron Src42A + chr2R 5992053 intron Src42A + chr2R_6_5990001 chr2R_5990001 RAL-804 388 chr2R 6033449 6033473 chr2R 6033534 6033558 6 85 5.0 5.5 5.2 1.0 109 chr2R 6033449 intron SCAP - chr2R 6033504 intron SCAP - chr2R 6033558 intron SCAP - chr2R_6_6030001 chr2R_6030001 RAL-804 389 chr2R 6037459 6037478 chr2R 6037544 6037563 4 85 2.5 3.5 3.0 1.0 104 chr2R 6037459 intron CG14591 - chr2R 6037511 intron CG14591 - chr2R 6037563 intron CG14591 - chr2R_4_6035001 chr2R_6035001 RAL-804 390 chr2R 6096724 6096752 chr2R 6101911 6101936 BS 8 5190 4.0 3.5 3.8 1.7 5212 chr2R 6096724 intron EcR - chr2R 6099330 intron EcR - chr2R 6101936 intron EcR - chr2R_8_6095001 chr2R_6095001 RAL-804 391 chr2R 6129326 6129353 chr2R 6129404 6129431 5 78 2.5 1.0 1.8 1.8 105 chr2R 6129326 intron EcR - chr2R 6129378 intron EcR - chr2R 6129431 intron EcR - chr2R_5_6125001 chr2R_6125001 RAL-804 392 chr2R 6194685 6194700 chr2R 6194768 6194783 8 83 5.0 6.0 5.5 1.2 98 chr2R 6194685 intron Ptr - chr2R 6194734 intron Ptr - chr2R 6194783 intron Ptr - chr2R_8_6190001 chr2R_6190001 RAL-804 393 chr2R 6494528 6494548 chr2R 6499288 6499310 F-element 6 4762 2.5 1.0 1.8 2.1 4782 chr2R 6494528 intergenic not near genes chr2R 6496919 intergenic not near genes chr2R 6499310 intergenic not near genes chr2R_6_6495001 chr2R_6495001 RAL-804 394 chr2R 6587504 6587529 chr2R 6587581 6587607 6 78 5.0 3.5 4.2 1.2 103 chr2R 6587504 intron jing + chr2R 6587556 intron jing + chr2R 6587607 intron jing + chr2R_6_6585001 chr2R_6585001 RAL-804 395 chr2R 6712589 6712600 chr2R 6712686 6712697 5 97 5.5 2.0 3.8 1.0 108 chr2R 6712589 intron,intron CG3409 -,CG45092 - chr2R 6712643 intron,intron CG3409 -,CG45092 - chr2R 6712697 intron,intron CG3409 -,CG45092 - chr2R_5_6710001 chr2R_6710001 RAL-804 396 chr2R 6860290 6860324 chr2R 6860367 6860375 6 72 2.5 4.5 3.5 1.3 85 chr2R 6860290 intergenic not near genes chr2R 6860332 intergenic not near genes chr2R 6860375 intergenic not near genes chr2R_6_6860001 chr2R_6860001 RAL-804 397 chr2R 6952171 6952185 chr2R 6959751 6959765 opus 4 7580 1.5 2.0 1.8 1.4 7594 chr2R 6952171 intron,intron mim -,CheB42c - chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959765 intron,intron mim -,CheB42c - chr2R_4_6955001 chr2R_6955001 RAL-804 398 chr2R 7153165 7153189 chr2R 7153251 7153275 7 86 3.5 4.0 3.8 1.5 110 chr2R 7153165 intron,intron pk +,Spn43Ab - chr2R 7153220 intron,intron pk +,Spn43Ab - chr2R 7153275 intron,intron pk +,Spn43Ab - chr2R_7_7150001 chr2R_7150001 RAL-804 399 chr2R 7235820 7235837 chr2R 7240912 7240926 jockey 8 5091 6.0 2.5 4.2 1.5 5106 chr2R 7235820 intergenic not near genes chr2R 7238373 intergenic not near genes chr2R 7240926 intergenic not near genes chr2R_8_7235001 chr2R_7235001 RAL-804 400 chr2R 7290197 7290222 chr2R 7290295 7290324 4 100 1.5 1.0 1.2 1.8 127 chr2R 7290197 intron pwn + chr2R 7290260 intron pwn + chr2R 7290324 intron pwn + chr2R_4_7290001 chr2R_7290001 RAL-804 401 chr2R 7353384 7353419 chr2R 7353490 7353525 11 106 1.5 1.5 1.5 4.4 141 chr2R 7353384 intron Dscam1 - chr2R 7353454 intron Dscam1 - chr2R 7353525 intron Dscam1 - chr2R_11_7350001 chr2R_7350001 RAL-804 402 chr2R 7393372 7393402 chr2R 7393462 7393478 7 83 4.0 3.5 3.8 1.5 106 chr2R 7393372 intergenic CG1707 -,Gr43a - chr2R 7393425 intergenic CG1707 -,Gr43a - chr2R 7393478 intergenic CG1707 -,Gr43a - chr2R_7_7390001 chr2R_7390001 RAL-804 403 chr2R 7434893 7434916 chr2R 7439194 7439217 Juan 4 4301 2.5 1.0 1.8 1.4 4324 chr2R 7434893 intergenic so + chr2R 7437055 intergenic not near genes chr2R 7439217 intergenic not near genes chr2R_4_7435001 chr2R_7435001 RAL-804 404 chr2R 7608410 7608437 chr2R 7613612 7613630 I-element 14 5202 2.5 1.5 2.0 4.7 5220 chr2R 7608410 intron CG1358 - chr2R 7611020 intron CG1358 - chr2R 7613630 intron CG1358 - chr2R_14_7610001 chr2R_7610001 RAL-804 405 chr2R 7714078 7714110 chr2R 7714154 7714186 11 76 2.0 0.0 1.0 5.5 108 chr2R 7714078 exon CG1942 + chr2R 7714132 3` UTR CG1942 + chr2R 7714186 intergenic CG1942 + chr2R_11_7710001 chr2R_7710001 RAL-804 406 chr2R 7746045 7746074 chr2R 7746274 7746290 5 225 0.5 2.0 1.2 2.3 245 chr2R 7746045 intron,intron CG30497 -,CG45093 - chr2R 7746168 intron,intron CG30497 -,CG45093 - chr2R 7746290 intron,intron CG30497 -,CG45093 - chr2R_5_7745001 chr2R_7745001 RAL-804 407 chr2R 7751369 7751403 chr2R 7751457 7751490 15 87 2.5 0.5 1.5 6.0 121 chr2R 7751369 intron,intron CG30497 -,CG45093 - chr2R 7751430 intron,intron CG30497 -,CG45093 - chr2R 7751490 intron,intron CG30497 -,CG45093 - chr2R_15_7750001 chr2R_7750001 RAL-804 408 chr2R 7769740 7769771 chr2R 7769816 7769848 5 77 1.0 1.0 1.0 2.5 108 chr2R 7769740 intron,intron CG30497 -,CG45093 - chr2R 7769794 intron,intron CG30497 -,CG45093 - chr2R 7769848 intron,intron CG30497 -,CG45093 - chr2R_5_7765001 chr2R_7765001 RAL-804 409 chr2R 7815671 7815700 chr2R 7822140 7822169 Burdock 12 6469 5.0 2.5 3.8 2.5 6498 chr2R 7815671 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822169 3` UTR cathD - chr2R_12_7815001 chr2R_7815001 RAL-804 410 chr2R 7862231 7862236 chr2R 7867345 7867350 flea 4 5114 6.5 1.5 4.0 0.8 5119 chr2R 7862231 intron Dgk - chr2R 7864790 intron Dgk - chr2R 7867350 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-804 411 chr2R 7869196 7869213 chr2R 7873976 7873999 Doc 7 4784 3.0 3.5 3.2 1.7 4803 chr2R 7869196 intron Dgk - chr2R 7871598 intron Dgk - chr2R 7873999 intron Dgk - chr2R_7_7870001 chr2R_7870001 RAL-804 412 chr2R 7884214 7884229 chr2R 7884279 7884300 4 70 1.5 1.0 1.2 1.8 86 chr2R 7884214 intron Dgk - chr2R 7884257 intron Dgk - chr2R 7884300 intron Dgk - chr2R_4_7880001 chr2R_7880001 RAL-804 413 chr2R 7897136 7897148 chr2R 7897225 7897236 4 88 0.0 6.0 3.0 1.0 100 chr2R 7897136 intron CG30377 + chr2R 7897186 intron CG30377 + chr2R 7897236 intron CG30377 + chr2R_4_7895001 chr2R_7895001 RAL-804 414 chr2R 7942930 7942955 chr2R 7943187 7943212 5 253 1.0 2.0 1.5 2.0 282 chr2R 7942930 intron CG14764 - chr2R 7943071 intron CG14764 - chr2R 7943212 intron CG14764 - chr2R_5_7940001 chr2R_7940001 RAL-804 415 chr2R 8015674 8015682 chr2R 8017672 8017701 4 2015 0.5 1.5 1.0 2.0 2027 chr2R 8015674 intergenic mir-4981 + chr2R 8016688 intergenic not near genes chr2R 8017701 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-804 416 chr2R 8114034 8114051 chr2R 8114123 8114139 4 88 0.0 0.5 0.2 3.3 105 chr2R 8114034 intergenic Asap - chr2R 8114086 intergenic Asap - chr2R 8114139 intergenic Asap - chr2R_4_8110001 chr2R_8110001 RAL-804 417 chr2R 8155583 8155614 chr2R 8155668 8155703 18 84 1.5 2.0 1.8 6.4 120 chr2R 8155583 intron,intron Lpin -,kermit - chr2R 8155643 intron,intron Lpin -,kermit - chr2R 8155703 intron,intron Lpin -,kermit - chr2R_18_8155001 chr2R_8155001 RAL-804 418 chr2R 8203745 8203777 chr2R 8203836 8203869 7 91 1.0 0.0 0.5 4.7 124 chr2R 8203745 intron LRP1 + chr2R 8203807 intron LRP1 + chr2R 8203869 intron LRP1 + chr2R_7_8200001 chr2R_8200001 RAL-804 419 chr2R 8330861 8330894 chr2R 8331347 8331380 roo 12 486 3.0 2.0 2.5 3.4 519 chr2R 8330861 intron pdm3 + chr2R 8331120 intron pdm3 + chr2R 8331380 intron pdm3 + chr2R_12_8330001 chr2R_8330001 RAL-804 420 chr2R 8398218 8398243 chr2R 8402995 8403023 Doc 9 4779 4.0 3.0 3.5 2.0 4805 chr2R 8398218 intron CG2121 - chr2R 8400620 intron CG2121 - chr2R 8403023 intron CG2121 - chr2R_9_8400001 chr2R_8400001 RAL-804 421 chr2R 8425857 8425883 chr2R 8426018 8426044 6 160 3.0 2.0 2.5 1.7 187 chr2R 8425857 intron CSN7 + chr2R 8425950 intron CSN7 + chr2R 8426044 intron CSN7 + chr2R_6_8425001 chr2R_8425001 RAL-804 422 chr2R 8454930 8454961 chr2R 8455873 8455905 7 944 39.0 17.5 28.2 0.2 975 chr2R 8454930 exon Mal-A2 + chr2R 8455418 exon Mal-A2 + chr2R 8455905 intergenic Mal-A3 -,Mal-A2 + chr2R_7_8455001 chr2R_8455001 RAL-804 423 chr2R 8470452 8470483 chr2R 8472544 8472566 8 2086 17.0 21.5 19.2 0.4 2114 chr2R 8470452 exon Mal-A7 - chr2R 8471509 exon Mal-A7 - chr2R 8472566 exon Mal-A8 + chr2R_8_8470001 chr2R_8470001 RAL-804 424 chr2R 8483966 8483989 chr2R 8484040 8484065 5 75 1.5 3.5 2.5 1.4 99 chr2R 8483966 intron mtt - chr2R 8484016 intron mtt - chr2R 8484065 intron mtt - chr2R_5_8480001 chr2R_8480001 RAL-804 425 chr2R 8511622 8511639 chr2R 8511696 8511710 6 76 4.0 7.0 5.5 0.9 88 chr2R 8511622 intron mtt - chr2R 8511666 intron mtt - chr2R 8511710 intron mtt - chr2R_6_8510001 chr2R_8510001 RAL-804 426 chr2R 8524080 8524104 chr2R 8524162 8524186 11 81 2.0 6.5 4.2 2.1 106 chr2R 8524080 intron mtt - chr2R 8524133 intron mtt - chr2R 8524186 intron mtt - chr2R_11_8520001 chr2R_8520001 RAL-804 427 chr2R 8536199 8536226 chr2R 8536430 8536458 11 230 4.0 2.0 3.0 2.8 259 chr2R 8536199 intergenic not near genes chr2R 8536328 intergenic not near genes chr2R 8536458 intergenic not near genes chr2R_11_8535001 chr2R_8535001 RAL-804 428 chr2R 8658249 8658267 chr2R 8658301 8658313 5 49 3.5 3.0 3.2 1.2 64 chr2R 8658249 intron ptc + chr2R 8658281 intron ptc + chr2R 8658313 intron ptc + chr2R_5_8655001 chr2R_8655001 RAL-804 429 chr2R 8668431 8668454 chr2R 8668519 8668542 7 88 0.5 0.5 0.5 4.7 111 chr2R 8668431 intron Acsl + chr2R 8668486 intron Acsl + chr2R 8668542 intron Acsl + chr2R_7_8665001 chr2R_8665001 RAL-804 430 chr2R 8722764 8722787 chr2R 8723005 8723028 pogo 11 239 6.0 4.5 5.2 1.8 264 chr2R 8722764 intron CG14767 - chr2R 8722896 intron CG14767 - chr2R 8723028 intron CG14767 - chr2R_11_8720001 chr2R_8720001 RAL-804 431 chr2R 8759759 8759791 chr2R 8759838 8759870 7 78 4.0 5.5 4.8 1.2 111 chr2R 8759759 intergenic CG8740 + chr2R 8759814 intergenic CG8740 + chr2R 8759870 intergenic CG8740 + chr2R_7_8755001 chr2R_8755001 RAL-804 432 chr2R 8833425 8833453 chr2R 8833507 8833535 11 81 5.5 6.5 6.0 1.6 110 chr2R 8833425 intron sns + chr2R 8833480 intron sns + chr2R 8833535 intron sns + chr2R_11_8830001 chr2R_8830001 RAL-804 433 chr2R 9016946 9016980 chr2R 9017032 9017061 6 85 7.0 13.0 10.0 0.5 115 chr2R 9016946 5` UTR CG13744 - chr2R 9017004 5` UTR CG13744 - chr2R 9017061 5` UTR CG13744 - chr2R_6_9015001 chr2R_9015001 RAL-804 434 chr2R 9075916 9075935 chr2R 9076045 9076070 4 134 9.5 12.5 11.0 0.3 154 chr2R 9075916 exon ana + chr2R 9075993 intron ana + chr2R 9076070 intron ana + chr2R_4_9075001 chr2R_9075001 RAL-804 435 chr2R 9212691 9212725 chr2R 9213177 9213210 roo 15 485 5.0 2.5 3.8 3.1 519 chr2R 9212691 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213210 5` UTR CR45309 + chr2R_15_9210001 chr2R_9210001 RAL-804 436 chr2R 9726612 9726635 chr2R 9734163 9734185 17.6 5 7550 3.0 1.0 2.0 1.7 7573 chr2R 9726612 intron sqa - chr2R 9730398 intron sqa - chr2R 9734185 intron sqa - chr2R_5_9730001 chr2R_9730001 RAL-804 437 chr2R 9761567 9761581 chr2R 9761656 9761670 4 88 11.5 10.0 10.8 0.3 103 chr2R 9761567 intron trpl + chr2R 9761618 exon trpl + chr2R 9761670 exon trpl + chr2R_4_9760001 chr2R_9760001 RAL-804 438 chr2R 9940747 9940774 chr2R 9940829 9940856 6 82 7.0 5.5 6.2 0.8 109 chr2R 9940747 5` UTR Mef2 - chr2R 9940802 5` UTR Mef2 - chr2R 9940856 5` UTR Mef2 - chr2R_6_9940001 chr2R_9940001 RAL-804 439 chr2R 9945440 9945455 chr2R 9945636 9945651 BS 10 196 3.5 2.5 3.0 2.5 211 chr2R 9945440 intron Mef2 - chr2R 9945546 intron Mef2 - chr2R 9945651 intron Mef2 - chr2R_10_9945001 chr2R_9945001 RAL-804 440 chr2R 10005553 10005575 chr2R 10005660 10005682 6 107 3.0 1.0 2.0 2.0 129 chr2R 10005553 intron Pka-R2 - chr2R 10005618 intron Pka-R2 - chr2R 10005682 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 RAL-804 441 chr2R 10005855 10005863 chr2R 10007020 10007028 1360 4 1164 5.5 4.5 5.0 0.7 1173 chr2R 10005855 intron Pka-R2 - chr2R 10006442 intron Pka-R2 - chr2R 10007028 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-804 442 chr2R 10005868 10005875 chr2R 10007014 10007038 1360 6 1158 3.0 3.5 3.2 1.4 1170 chr2R 10005868 intron Pka-R2 - chr2R 10006453 intron Pka-R2 - chr2R 10007038 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 RAL-804 443 chr2R 10040904 10040938 chr2R 10040986 10041020 8 82 3.0 3.5 3.2 1.9 116 chr2R 10040904 intron oys - chr2R 10040962 intron oys - chr2R 10041020 intron oys - chr2R_8_10040001 chr2R_10040001 RAL-804 444 chr2R 10132202 10132222 chr2R 10132282 10132302 11 80 2.0 3.5 2.8 2.9 100 chr2R 10132202 intron gem + chr2R 10132252 intron gem + chr2R 10132302 intron gem + chr2R_11_10130001 chr2R_10130001 RAL-804 445 chr2R 10190444 10190473 chr2R 10190528 10190548 4 82 6.5 8.0 7.2 0.5 104 chr2R 10190444 intron KCNQ - chr2R 10190496 intron KCNQ - chr2R 10190548 intron KCNQ - chr2R_4_10190001 chr2R_10190001 RAL-804 446 chr2R 10216192 10216224 chr2R 10216270 10216302 8 78 0.5 3.5 2.0 2.7 110 chr2R 10216192 intron,intron CG12912 -,Hr46 - chr2R 10216247 intron,intron CG12912 -,Hr46 - chr2R 10216302 intron,intron CG12912 -,Hr46 - chr2R_8_10215001 chr2R_10215001 RAL-804 447 chr2R 10257157 10257258 chr2R 10257248 10257477 4 155 0.0 0.0 0.0 4.0 320 chr2R 10257157 intron CG12911 + chr2R 10257317 intron CG12911 + chr2R 10257477 intron CG12911 + chr2R_4_10255001 chr2R_10255001 RAL-804 448 chr2R 10313319 10313354 chr2R 10313407 10313442 5 88 0.5 4.5 2.5 1.4 123 chr2R 10313319 intergenic not near genes chr2R 10313380 intergenic not near genes chr2R 10313442 intergenic Ndg + chr2R_5_10310001 chr2R_10310001 RAL-804 449 chr2R 10350906 10350936 chr2R 10350988 10351020 8 83 4.0 4.5 4.2 1.5 114 chr2R 10350906 intron CG42732 - chr2R 10350963 intron CG42732 - chr2R 10351020 intron CG42732 - chr2R_8_10350001 chr2R_10350001 RAL-804 450 chr2R 10352676 10352687 chr2R 10352753 10352764 4 77 1.5 2.5 2.0 1.3 88 chr2R 10352676 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352720 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352764 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_4_10350001 chr2R_10350001 RAL-804 451 chr2R 10370513 10370526 chr2R 10370656 10370669 6 143 0.5 1.0 0.8 3.3 156 chr2R 10370513 intron CG42732 - chr2R 10370591 intron CG42732 - chr2R 10370669 intron CG42732 - chr2R_6_10370001 chr2R_10370001 RAL-804 452 chr2R 10429019 10429043 chr2R 10429096 10429120 9 76 2.0 5.0 3.5 2.0 101 chr2R 10429019 intergenic not near genes chr2R 10429070 intergenic not near genes chr2R 10429120 intergenic not near genes chr2R_9_10425001 chr2R_10425001 RAL-804 453 chr2R 10454098 10454126 chr2R 10454175 10454203 13 76 5.5 11.0 8.2 1.4 105 chr2R 10454098 intron,intron Galphao +,Cyp49a1 - chr2R 10454150 intron,intron Galphao +,Cyp49a1 - chr2R 10454203 intron,intron Galphao +,Cyp49a1 - chr2R_13_10450001 chr2R_10450001 RAL-804 454 chr2R 10469024 10469051 chr2R 10469149 10469177 17 123 4.0 3.0 3.5 3.8 153 chr2R 10469024 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469177 intron CG11777 + chr2R_17_10465001 chr2R_10465001 RAL-804 455 chr2R 10574629 10574639 chr2R 10574709 10574720 4 81 4.0 2.5 3.2 1.0 91 chr2R 10574629 intron psq + chr2R 10574674 intron psq + chr2R 10574720 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-804 456 chr2R 10582115 10582141 chr2R 10582210 10582236 6 95 4.0 1.5 2.8 1.6 121 chr2R 10582115 intron psq + chr2R 10582176 intron psq + chr2R 10582236 intron psq + chr2R_6_10580001 chr2R_10580001 RAL-804 457 chr2R 10585582 10585589 chr2R 10594153 10594167 Tirant 4 8578 3.0 3.5 3.2 1.0 8585 chr2R 10585582 intron psq + chr2R 10589874 intron psq + chr2R 10594167 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-804 458 chr2R 10644071 10644086 chr2R 10644149 10644164 5 78 0.5 0.5 0.5 3.3 93 chr2R 10644071 intron Git - chr2R 10644118 intron Git - chr2R 10644164 intron Git - chr2R_5_10640001 chr2R_10640001 RAL-804 459 chr2R 10683959 10683988 chr2R 10684097 10684114 4 130 3.0 5.0 4.0 0.8 155 chr2R 10683959 intron stan + chr2R 10684036 intron stan + chr2R 10684114 intron stan + chr2R_4_10680001 chr2R_10680001 RAL-804 460 chr2R 10727497 10727524 chr2R 10727595 10727620 6 94 5.0 8.0 6.5 0.8 123 chr2R 10727497 intron Rab3 - chr2R 10727558 intron Rab3 - chr2R 10727620 intron Rab3 - chr2R_6_10725001 chr2R_10725001 RAL-804 461 chr2R 10796715 10796737 chr2R 10796814 10796828 4 97 16.0 10.5 13.2 0.3 113 chr2R 10796715 intron CG33144 - chr2R 10796772 intron CG33144 - chr2R 10796828 intron CG33144 - chr2R_4_10795001 chr2R_10795001 RAL-804 462 chr2R 10827335 10827360 chr2R 10827421 10827448 4 88 11.0 10.5 10.8 0.3 113 chr2R 10827335 exon CG12325 + chr2R 10827392 3` UTR CG12325 + chr2R 10827448 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_4_10825001 chr2R_10825001 RAL-804 463 chr2R 10834246 10834261 chr2R 10834719 10834733 4 472 11.0 15.0 13.0 0.3 487 chr2R 10834246 intron CG12344 - chr2R 10834490 intron CG12344 - chr2R 10834733 intron CG12344 - chr2R_4_10830001 chr2R_10830001 RAL-804 464 chr2R 10886347 10886370 chr2R 10886458 10886481 4 111 1.0 1.0 1.0 2.0 134 chr2R 10886347 3` UTR CG18004 + chr2R 10886414 intergenic CG18004 +,CG30020 + chr2R 10886481 intergenic CG18004 +,CG30020 + chr2R_4_10885001 chr2R_10885001 RAL-804 465 chr2R 10947096 10947101 chr2R 10947183 10947188 4 87 5.0 0.0 2.5 1.1 92 chr2R 10947096 intergenic CR45228 + chr2R 10947142 intergenic CR45228 + chr2R 10947188 intergenic CR45228 + chr2R_4_10945001 chr2R_10945001 RAL-804 466 chr2R 10948030 10948061 chr2R 10955575 10955595 17.6 15 7547 1.0 3.5 2.2 4.7 7565 chr2R 10948030 intergenic not near genes chr2R 10951812 intergenic not near genes chr2R 10955595 intergenic not near genes chr2R_15_10950001 chr2R_10950001 RAL-804 467 chr2R 10979660 10979682 chr2R 10980130 10980152 297 4 470 1.0 3.5 2.2 1.2 492 chr2R 10979660 intergenic not near genes chr2R 10979906 intergenic not near genes chr2R 10980152 intergenic not near genes chr2R_4_10975001 chr2R_10975001 RAL-804 468 chr2R 11009816 11009848 chr2R 11018990 11019021 roo 9 9174 1.5 2.5 2.0 3.0 9205 chr2R 11009816 intron luna - chr2R 11014418 intron luna - chr2R 11019021 intron luna - chr2R_9_11010001 chr2R_11010001 RAL-804 469 chr2R 11019891 11019912 chr2R 11024956 11024978 jockey 4 5066 2.0 4.0 3.0 1.0 5087 chr2R 11019891 intron luna - chr2R 11022434 intron luna - chr2R 11024978 intron luna - chr2R_4_11020001 chr2R_11020001 RAL-804 470 chr2R 11028773 11028787 chr2R 11028962 11028976 7 189 4.5 3.0 3.8 1.5 203 chr2R 11028773 intron luna - chr2R 11028874 intron luna - chr2R 11028976 intron luna - chr2R_7_11025001 chr2R_11025001 RAL-804 471 chr2R 11064704 11064735 chr2R 11064787 11064818 4 83 6.0 4.5 5.2 0.6 114 chr2R 11064704 intron luna - chr2R 11064761 intron luna - chr2R 11064818 intron luna - chr2R_4_11060001 chr2R_11060001 RAL-804 472 chr2R 11102878 11102888 chr2R 11102960 11102970 4 82 10.5 3.0 6.8 0.5 92 chr2R 11102878 intron luna - chr2R 11102924 intron luna - chr2R 11102970 intron luna - chr2R_4_11100001 chr2R_11100001 RAL-804 473 chr2R 11179267 11179289 chr2R 11179353 11179375 5 86 1.0 6.0 3.5 1.1 108 chr2R 11179267 intron shn + chr2R 11179321 intron shn + chr2R 11179375 intron shn + chr2R_5_11175001 chr2R_11175001 RAL-804 474 chr2R 11207826 11207845 chr2R 11208019 11208037 BS 5 193 6.0 3.5 4.8 0.9 211 chr2R 11207826 intron shn + chr2R 11207932 intron shn + chr2R 11208037 intron shn + chr2R_5_11205001 chr2R_11205001 RAL-804 475 chr2R 11253240 11253262 chr2R 11253311 11253336 4 74 8.0 5.0 6.5 0.5 96 chr2R 11253240 intron Cpr47Ea - chr2R 11253288 intron Cpr47Ea - chr2R 11253336 intron Cpr47Ea - chr2R_4_11250001 chr2R_11250001 RAL-804 476 chr2R 11297616 11297646 chr2R 11301937 11301966 flea 5 4321 3.0 1.0 2.0 1.7 4350 chr2R 11297616 intergenic CG42336 - chr2R 11299791 intergenic not near genes chr2R 11301966 5` UTR CG7741 + chr2R_5_11295001 chr2R_11295001 RAL-804 477 chr2R 11344148 11344181 chr2R 11344244 11344272 6 95 0.0 4.0 2.0 2.0 124 chr2R 11344148 intergenic alphaTry - chr2R 11344210 intergenic alphaTry - chr2R 11344272 3` UTR alphaTry - chr2R_6_11340001 chr2R_11340001 RAL-804 478 chr2R 11415528 11415546 chr2R 11418677 11418689 opus 4 3147 1.0 5.5 3.2 1.0 3161 chr2R 11415528 intron Drip - chr2R 11417108 intron Drip - chr2R 11418689 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-804 479 chr2R 11472649 11472680 chr2R 11473846 11473877 pogo 8 1197 0.5 2.0 1.2 3.6 1228 chr2R 11472649 intergenic not near genes chr2R 11473263 intergenic not near genes chr2R 11473877 intergenic not near genes chr2R_8_11470001 chr2R_11470001 RAL-804 480 chr2R 11515563 11515570 chr2R 11515646 11515654 5 84 5.0 8.0 6.5 0.7 91 chr2R 11515563 intergenic not near genes chr2R 11515608 intergenic not near genes chr2R 11515654 intergenic not near genes chr2R_5_11515001 chr2R_11515001 RAL-804 481 chr2R 11596997 11597017 chr2R 11597085 11597086 4 79 7.0 6.0 6.5 0.5 89 chr2R 11596997 intron tou - chr2R 11597042 intron tou - chr2R 11597086 intron tou - chr2R_4_11595001 chr2R_11595001 RAL-804 482 chr2R 11673827 11673846 chr2R 11677358 11677377 4 3531 5.0 8.0 6.5 0.5 3550 chr2R 11673827 intron,exon Roc2 -,Tret1-1 + chr2R 11675602 intron Roc2 - chr2R 11677377 intron,exon Roc2 -,Tret1-2 + chr2R_4_11675001 chr2R_11675001 RAL-804 483 chr2R 11724183 11724189 chr2R 11724266 11724272 4 83 1.0 4.5 2.8 1.1 89 chr2R 11724183 intron pyr + chr2R 11724228 intron pyr + chr2R 11724272 intron pyr + chr2R_4_11720001 chr2R_11720001 RAL-804 484 chr2R 11822981 11823005 chr2R 11823058 11823082 5 75 0.0 2.0 1.0 2.5 101 chr2R 11822981 intergenic not near genes chr2R 11823032 intergenic not near genes chr2R 11823082 intergenic not near genes chr2R_5_11820001 chr2R_11820001 RAL-804 485 chr2R 11829064 11829096 chr2R 11829182 11829214 14 118 1.5 2.0 1.8 5.0 150 chr2R 11829064 exon Sobp - chr2R 11829139 intron Sobp - chr2R 11829214 intron Sobp - chr2R_14_11825001 chr2R_11825001 RAL-804 486 chr2R 11932561 11932594 chr2R 11932678 11932711 12 114 3.0 4.0 3.5 2.7 150 chr2R 11932561 intergenic not near genes chr2R 11932636 intergenic not near genes chr2R 11932711 intergenic not near genes chr2R_12_11930001 chr2R_11930001 RAL-804 487 chr2R 12124829 12124862 chr2R 12124913 12124945 13 83 1.5 3.0 2.2 4.1 116 chr2R 12124829 intergenic not near genes chr2R 12124887 intergenic not near genes chr2R 12124945 intergenic not near genes chr2R_13_12120001 chr2R_12120001 RAL-804 488 chr2R 12187472 12187508 chr2R 12190088 12190124 13 2619 50.0 44.0 47.0 0.3 2652 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_13_12185001 chr2R_12185001 RAL-804 489 chr2R 12210132 12210165 chr2R 12210212 12210246 9 81 1.5 2.5 2.0 3.0 114 chr2R 12210132 exon Sr-CII - chr2R 12210189 intron Sr-CII - chr2R 12210246 intron Sr-CII - chr2R_9_12210001 chr2R_12210001 RAL-804 490 chr2R 12236234 12236241 chr2R 12236324 12236332 4 91 3.5 2.0 2.8 1.1 98 chr2R 12236234 intergenic not near genes chr2R 12236283 intergenic not near genes chr2R 12236332 intergenic not near genes chr2R_4_12235001 chr2R_12235001 RAL-804 491 chr2R 12255732 12255750 chr2R 12255851 12255869 4 119 1.5 1.0 1.2 1.8 137 chr2R 12255732 intergenic CG13168 + chr2R 12255800 intergenic CG13168 + chr2R 12255869 intergenic CG13168 + chr2R_4_12255001 chr2R_12255001 RAL-804 492 chr2R 12363394 12363415 chr2R 12363826 12363846 7 432 0.5 0.5 0.5 4.7 452 chr2R 12363394 intergenic CG30043 + chr2R 12363620 intergenic CG30043 + chr2R 12363846 intergenic not near genes chr2R_7_12360001 chr2R_12360001 RAL-804 493 chr2R 12385343 12385375 chr2R 12385424 12385449 13 80 0.0 1.0 0.5 8.7 106 chr2R 12385343 intergenic not near genes chr2R 12385396 intergenic not near genes chr2R 12385449 intergenic not near genes chr2R_13_12385001 chr2R_12385001 RAL-804 494 chr2R 12501698 12501724 chr2R 12503857 12503886 Rt1c 9 2161 3.5 3.0 3.2 2.1 2188 chr2R 12501698 intron fdl - chr2R 12502792 intron fdl - chr2R 12503886 intron fdl - chr2R_9_12500001 chr2R_12500001 RAL-804 495 chr2R 12522431 12522451 chr2R 12522515 12522530 4 82 0.5 1.0 0.8 2.2 99 chr2R 12522431 exon CG33632 + chr2R 12522480 exon CG33632 + chr2R 12522530 intron CG33632 + chr2R_4_12520001 chr2R_12520001 RAL-804 496 chr2R 12527272 12527303 chr2R 12527481 12527511 11 209 4.5 2.0 3.2 2.6 239 chr2R 12527272 intergenic not near genes chr2R 12527392 intergenic not near genes chr2R 12527511 intergenic not near genes chr2R_11_12525001 chr2R_12525001 RAL-804 497 chr2R 12529262 12529279 chr2R 12529541 12529558 6 278 4.5 6.0 5.2 1.0 296 chr2R 12529262 5` UTR fra + chr2R 12529410 5` UTR fra + chr2R 12529558 5` UTR fra + chr2R_6_12525001 chr2R_12525001 RAL-804 498 chr2R 12529280 12529291 chr2R 12529538 12529569 6 270 4.0 5.0 4.5 1.1 289 chr2R 12529280 5` UTR fra + chr2R 12529424 5` UTR fra + chr2R 12529569 5` UTR fra + chr2R_6_12525001 chr2R_12525001 RAL-804 499 chr2R 12610721 12610746 chr2R 12610816 12610841 14 95 2.5 3.0 2.8 3.7 120 chr2R 12610721 exon Amph + chr2R 12610781 intron Amph + chr2R 12610841 intron Amph + chr2R_14_12610001 chr2R_12610001 RAL-804 500 chr2R 12643787 12643813 chr2R 12643863 12643890 9 76 0.5 1.0 0.8 5.0 103 chr2R 12643787 intron CG8785 - chr2R 12643838 intron CG8785 - chr2R 12643890 exon CG8785 - chr2R_9_12640001 chr2R_12640001 RAL-804 501 chr2R 12722059 12722087 chr2R 12722170 12722198 12 109 0.5 4.5 2.5 3.4 139 chr2R 12722059 intron CG42663 + chr2R 12722128 intron CG42663 + chr2R 12722198 intron CG42663 + chr2R_12_12720001 chr2R_12720001 RAL-804 502 chr2R 12789311 12789323 chr2R 12797674 12797686 roo 4 8363 2.5 4.5 3.5 0.9 8375 chr2R 12789311 intron,3` UTR sca +,CR45137 - chr2R 12793498 intron,intron sca +,CR45137 - chr2R 12797686 intron,3` UTR sca +,CR45137 - chr2R_4_12790001 chr2R_12790001 RAL-804 503 chr2R 12808321 12808343 chr2R 12808416 12808438 11 95 3.0 3.0 3.0 2.8 117 chr2R 12808321 intergenic not near genes chr2R 12808380 intergenic not near genes chr2R 12808438 intergenic not near genes chr2R_11_12805001 chr2R_12805001 RAL-804 504 chr2R 12951668 12951695 chr2R 12951749 12951776 11 80 1.0 3.5 2.2 3.4 108 chr2R 12951668 intron,intron CG44251 -,CG44250 - chr2R 12951722 intron,intron CG44251 -,CG44250 - chr2R 12951776 intron,intron CG44251 -,CG44250 - chr2R_11_12950001 chr2R_12950001 RAL-804 505 chr2R 12971107 12971120 chr2R 12971193 12971206 5 86 3.0 3.0 3.0 1.2 99 chr2R 12971107 intron Psc - chr2R 12971156 intron Psc - chr2R 12971206 intron Psc - chr2R_5_12970001 chr2R_12970001 RAL-804 506 chr2R 13136841 13136867 chr2R 13141639 13141665 Doc 19 4798 3.5 2.5 3.0 4.8 4824 chr2R 13136841 exon Cap-G + chr2R 13139253 intron Cap-G + chr2R 13141665 intron Cap-G + chr2R_19_13135001 chr2R_13135001 RAL-804 507 chr2R 13172090 13172115 chr2R 13172168 13172171 4 72 3.0 1.0 2.0 1.3 81 chr2R 13172090 intron AGBE + chr2R 13172130 intron AGBE + chr2R 13172171 intron AGBE + chr2R_4_13170001 chr2R_13170001 RAL-804 508 chr2R 13321933 13321962 chr2R 13322039 13322068 4 106 0.5 0.5 0.5 2.7 135 chr2R 13321933 intergenic not near genes chr2R 13322000 intergenic not near genes chr2R 13322068 intergenic not near genes chr2R_4_13320001 chr2R_13320001 RAL-804 509 chr2R 13432942 13432967 chr2R 13433014 13433043 6 73 1.0 2.0 1.5 2.4 101 chr2R 13432942 intron CG42321 - chr2R 13432992 intron CG42321 - chr2R 13433043 intron,5` UTR CG42321 -,CG30065 + chr2R_6_13430001 chr2R_13430001 RAL-804 510 chr2R 13536975 13537004 chr2R 13537058 13537087 13 83 2.5 2.5 2.5 3.7 112 chr2R 13536975 intergenic CG6145 - chr2R 13537031 intergenic CG6145 - chr2R 13537087 intergenic CG6145 - chr2R_13_13535001 chr2R_13535001 RAL-804 511 chr2R 13580498 13580522 chr2R 13580847 13580872 jockey 5 350 2.5 2.5 2.5 1.4 374 chr2R 13580498 3` UTR CG6191 - chr2R 13580685 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580872 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_5_13580001 chr2R_13580001 RAL-804 512 chr2R 13632311 13632319 chr2R 13632399 13632407 5 88 7.5 2.0 4.8 0.9 96 chr2R 13632311 intron fas + chr2R 13632359 intron fas + chr2R 13632407 intron fas + chr2R_5_13630001 chr2R_13630001 RAL-804 513 chr2R 13768979 13769010 chr2R 13769078 13769109 14 99 2.5 6.5 4.5 2.5 130 chr2R 13768979 intergenic not near genes chr2R 13769044 intergenic not near genes chr2R 13769109 intergenic not near genes chr2R_14_13765001 chr2R_13765001 RAL-804 514 chr2R 13790328 13790343 chr2R 13790404 13790418 4 74 2.5 0.0 1.2 1.8 90 chr2R 13790328 intergenic not near genes chr2R 13790373 intergenic not near genes chr2R 13790418 intergenic not near genes chr2R_4_13790001 chr2R_13790001 RAL-804 515 chr2R 13793149 13793161 chr2R 13793224 13793225 5 72 4.5 1.5 3.0 1.2 76 chr2R 13793149 intergenic not near genes chr2R 13793187 intergenic not near genes chr2R 13793225 intergenic not near genes chr2R_5_13790001 chr2R_13790001 RAL-804 516 chr2R 13905602 13905626 chr2R 13907584 13907608 Rt1a 8 1980 1.5 4.0 2.8 2.1 2006 chr2R 13905602 intron shot - chr2R 13906605 intron shot - chr2R 13907608 intron shot - chr2R_8_13905001 chr2R_13905001 RAL-804 517 chr2R 13925848 13925893 chr2R 13926024 13926047 5 158 2.0 3.0 2.5 1.4 199 chr2R 13925848 intron shot - chr2R 13925948 intron shot - chr2R 13926047 intron shot - chr2R_5_13925001 chr2R_13925001 RAL-804 518 chr2R 14018155 14018190 chr2R 14018239 14018274 7 84 2.0 0.0 1.0 3.5 119 chr2R 14018155 intron mam + chr2R 14018214 intron mam + chr2R 14018274 intron mam + chr2R_7_14015001 chr2R_14015001 RAL-804 519 chr2R 14175986 14175997 chr2R 14176296 14176304 4 308 3.0 2.0 2.5 1.1 318 chr2R 14175986 intron cg + chr2R 14176145 intron cg + chr2R 14176304 intron cg + chr2R_4_14175001 chr2R_14175001 RAL-804 520 chr2R 14378981 14379014 chr2R 14379444 14379478 9 464 8.0 7.5 7.8 1.0 497 chr2R 14378981 intron Dh44-R1 + chr2R 14379230 intron Dh44-R1 + chr2R 14379478 intron Dh44-R1 + chr2R_9_14375001 chr2R_14375001 RAL-804 521 chr2R 14381788 14381813 chr2R 14382104 14382129 8 316 8.0 6.0 7.0 1.0 341 chr2R 14381788 intron Dh44-R1 + chr2R 14381958 intron Dh44-R1 + chr2R 14382129 intron Dh44-R1 + chr2R_8_14380001 chr2R_14380001 RAL-804 522 chr2R 14386446 14386453 chr2R 14386533 14386540 4 87 2.0 4.5 3.2 1.0 94 chr2R 14386446 intergenic not near genes chr2R 14386493 intergenic not near genes chr2R 14386540 intergenic not near genes chr2R_4_14385001 chr2R_14385001 RAL-804 523 chr2R 14393864 14393895 chr2R 14393949 14393979 7 82 15.5 8.5 12.0 0.5 115 chr2R 14393864 intergenic not near genes chr2R 14393922 intergenic not near genes chr2R 14393979 intergenic not near genes chr2R_7_14390001 chr2R_14390001 RAL-804 524 chr2R 14405560 14405581 chr2R 14405892 14405918 4 335 0.0 0.5 0.2 3.3 358 chr2R 14405560 intergenic not near genes chr2R 14405739 intergenic not near genes chr2R 14405918 intergenic not near genes chr2R_4_14405001 chr2R_14405001 RAL-804 525 chr2R 14467311 14467325 chr2R 14476469 14476483 roo 9 9158 1.5 7.5 4.5 1.6 9172 chr2R 14467311 intergenic not near genes chr2R 14471897 intergenic not near genes chr2R 14476483 5` UTR CR44462 + chr2R_9_14470001 chr2R_14470001 RAL-804 526 chr2R 14514490 14514498 chr2R 14514583 14514591 5 93 2.0 4.5 3.2 1.2 101 chr2R 14514490 intron,intron Cpr51A -,CG30197 + chr2R 14514540 intron,intron Cpr51A -,CG30197 + chr2R 14514591 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 RAL-804 527 chr2R 14702335 14702359 chr2R 14702415 14702440 5 81 3.0 3.5 3.2 1.2 105 chr2R 14702335 intron mspo - chr2R 14702388 intron mspo - chr2R 14702440 intron mspo - chr2R_5_14700001 chr2R_14700001 RAL-804 528 chr2R 14786026 14786058 chr2R 14786119 14786151 6 93 0.0 0.0 0.0 6.0 125 chr2R 14786026 intron kn - chr2R 14786088 intron kn - chr2R 14786151 intron kn - chr2R_6_14785001 chr2R_14785001 RAL-804 529 chr2R 14873694 14873721 chr2R 14875212 14875239 5 1517 1.0 3.5 2.2 1.6 1545 chr2R 14873694 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874466 exon Cyp6a17 + chr2R 14875239 exon Cyp6a17 + chr2R_5_14870001 chr2R_14870001 RAL-804 530 chr2R 14889208 14889230 chr2R 14897816 14897838 Max-element 8 8608 6.0 0.5 3.2 1.9 8630 chr2R 14889208 intergenic Cyp6a8 - chr2R 14893523 intergenic not near genes chr2R 14897838 intergenic not near genes chr2R_8_14890001 chr2R_14890001 RAL-804 531 chr2R 14911700 14911709 chr2R 14911823 14911832 6 123 6.0 3.0 4.5 1.1 132 chr2R 14911700 intron CG10249 - chr2R 14911766 intron CG10249 - chr2R 14911832 intron CG10249 - chr2R_6_14910001 chr2R_14910001 RAL-804 532 chr2R 14917848 14917883 chr2R 14917933 14917968 8 85 2.0 3.5 2.8 2.1 120 chr2R 14917848 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14917968 intron CG10249 - chr2R_8_14915001 chr2R_14915001 RAL-804 533 chr2R 15004739 15004746 chr2R 15005068 15005075 jockey 4 329 0.5 4.0 2.2 1.2 336 chr2R 15004739 intergenic not near genes chr2R 15004907 intergenic not near genes chr2R 15005075 intergenic not near genes chr2R_4_15000001 chr2R_15000001 RAL-804 534 chr2R 15015455 15015489 chr2R 15022878 15022911 mdg1 10 7423 2.0 4.0 3.0 2.5 7456 chr2R 15015455 intron hbs + chr2R 15019183 intron hbs + chr2R 15022911 intron hbs + chr2R_10_15015001 chr2R_15015001 RAL-804 535 chr2R 15046514 15046543 chr2R 15046618 15046647 8 104 3.5 2.0 2.8 2.1 133 chr2R 15046514 intergenic not near genes chr2R 15046580 intergenic not near genes chr2R 15046647 intergenic not near genes chr2R_8_15045001 chr2R_15045001 RAL-804 536 chr2R 15054737 15054766 chr2R 15054811 15054843 7 75 1.5 3.5 2.5 2.0 106 chr2R 15054737 intergenic not near genes chr2R 15054790 intergenic not near genes chr2R 15054843 intergenic not near genes chr2R_7_15050001 chr2R_15050001 RAL-804 537 chr2R 15084985 15084998 chr2R 15092034 15092047 297 4 7049 2.5 2.0 2.2 1.2 7062 chr2R 15084985 intergenic not near genes chr2R 15088516 intergenic not near genes chr2R 15092047 5` UTR CR44457 + chr2R_4_15085001 chr2R_15085001 RAL-804 538 chr2R 15094888 15094912 chr2R 15094965 15094989 7 77 1.5 3.0 2.2 2.2 101 chr2R 15094888 intergenic not near genes chr2R 15094938 intergenic not near genes chr2R 15094989 intergenic not near genes chr2R_7_15090001 chr2R_15090001 RAL-804 539 chr2R 15119316 15119345 chr2R 15127797 15127825 Tirant 5 8480 3.0 2.5 2.8 1.3 8509 chr2R 15119316 intron chn + chr2R 15123570 intron chn + chr2R 15127825 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-804 540 chr2R 15133437 15133452 chr2R 15133553 15133568 5 117 1.5 1.0 1.2 2.3 131 chr2R 15133437 intron chn + chr2R 15133502 intron chn + chr2R 15133568 intron chn + chr2R_5_15130001 chr2R_15130001 RAL-804 541 chr2R 15137971 15138004 chr2R 15138051 15138086 9 80 2.0 0.0 1.0 4.5 115 chr2R 15137971 intron chn + chr2R 15138028 intron chn + chr2R 15138086 intron chn + chr2R_9_15135001 chr2R_15135001 RAL-804 542 chr2R 15301753 15301784 chr2R 15301863 15301894 9 110 2.5 8.0 5.2 1.5 141 chr2R 15301753 intron Trpm - chr2R 15301824 intron Trpm - chr2R 15301894 intron Trpm - chr2R_9_15300001 chr2R_15300001 RAL-804 543 chr2R 15430148 15430174 chr2R 15430286 15430312 4 138 5.0 9.5 7.2 0.5 164 chr2R 15430148 intron CG43729 + chr2R 15430230 intron CG43729 + chr2R 15430312 intron CG43729 + chr2R_4_15430001 chr2R_15430001 RAL-804 544 chr2R 15797074 15797109 chr2R 15797341 15797359 11 265 0.5 4.5 2.5 3.1 285 chr2R 15797074 intron,intron Zasp52 -,tun + chr2R 15797216 intron,intron Zasp52 -,tun + chr2R 15797359 intron,intron Zasp52 -,tun + chr2R_11_15795001 chr2R_15795001 RAL-804 545 chr2R 15898883 15898908 chr2R 15898981 15899006 5 95 2.5 2.5 2.5 1.4 123 chr2R 15898883 intron sli - chr2R 15898944 intron sli - chr2R 15899006 intron sli - chr2R_5_15895001 chr2R_15895001 RAL-804 546 chr2R 16245416 16245430 chr2R 16245510 16245524 4 94 0.0 2.0 1.0 2.0 108 chr2R 16245416 intron CngA - chr2R 16245470 intron CngA - chr2R 16245524 intron CngA - chr2R_4_16245001 chr2R_16245001 RAL-804 547 chr2R 16380125 16380148 chr2R 16380223 16380245 8 98 3.0 2.0 2.5 2.3 120 chr2R 16380125 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380185 3` UTR CR45317 - chr2R 16380245 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_8_16380001 chr2R_16380001 RAL-804 548 chr2R 16489265 16489302 chr2R 16489349 16489386 11 84 2.5 1.0 1.8 3.9 121 chr2R 16489265 intergenic CG33459 + chr2R 16489326 intergenic CG33459 + chr2R 16489386 intergenic CG33459 + chr2R_11_16485001 chr2R_16485001 RAL-804 549 chr2R 16503878 16503894 chr2R 16503968 16503984 4 90 2.5 5.0 3.8 0.8 106 chr2R 16503878 intron Sema-2a + chr2R 16503931 intron Sema-2a + chr2R 16503984 intron Sema-2a + chr2R_4_16500001 chr2R_16500001 RAL-804 550 chr2R 16509798 16509827 chr2R 16509875 16509887 10 73 2.0 3.5 2.8 2.6 89 chr2R 16509798 intron Sema-2a + chr2R 16509842 intron Sema-2a + chr2R 16509887 intron Sema-2a + chr2R_10_16505001 chr2R_16505001 RAL-804 551 chr2R 16518045 16518069 chr2R 16518121 16518129 5 72 2.0 0.5 1.2 2.3 84 chr2R 16518045 intron Sema-2a + chr2R 16518087 intron Sema-2a + chr2R 16518129 intron Sema-2a + chr2R_5_16515001 chr2R_16515001 RAL-804 552 chr2R 16617059 16617090 chr2R 16617138 16617169 8 79 2.5 2.0 2.2 2.5 110 chr2R 16617059 intron CG5065 + chr2R 16617114 intron CG5065 + chr2R 16617169 intron CG5065 + chr2R_8_16615001 chr2R_16615001 RAL-804 553 chr2R 16619970 16619999 chr2R 16620051 16620079 6 80 2.0 0.5 1.2 2.7 109 chr2R 16619970 intron CG5065 + chr2R 16620024 intron CG5065 + chr2R 16620079 intron CG5065 + chr2R_6_16620001 chr2R_16620001 RAL-804 554 chr2R 16683931 16683952 chr2R 16684296 16684317 6 365 3.5 5.5 4.5 1.1 386 chr2R 16683931 intron CG30463 - chr2R 16684124 intron CG30463 - chr2R 16684317 intron CG30463 - chr2R_6_16680001 chr2R_16680001 RAL-804 555 chr2R 16787474 16787486 chr2R 16787556 16787568 6 82 3.0 0.0 1.5 2.4 94 chr2R 16787474 intron CG5522 + chr2R 16787521 intron CG5522 + chr2R 16787568 intron CG5522 + chr2R_6_16785001 chr2R_16785001 RAL-804 556 chr2R 16808748 16808763 chr2R 16808879 16808912 6 145 2.5 4.0 3.2 1.4 164 chr2R 16808748 intergenic not near genes chr2R 16808830 intergenic not near genes chr2R 16808912 intergenic not near genes chr2R_6_16805001 chr2R_16805001 RAL-804 557 chr2R 16889572 16889590 chr2R 16889664 16889682 5 92 4.5 1.5 3.0 1.2 110 chr2R 16889572 intron CG8910 - chr2R 16889627 intron CG8910 - chr2R 16889682 intron CG8910 - chr2R_5_16885001 chr2R_16885001 RAL-804 558 chr2R 16893777 16893804 chr2R 16893860 16893886 7 83 1.5 4.0 2.8 1.8 109 chr2R 16893777 intron CG8910 - chr2R 16893832 intron CG8910 - chr2R 16893886 intron CG8910 - chr2R_7_16890001 chr2R_16890001 RAL-804 559 chr2R 16926860 16926888 chr2R 16926955 16926983 10 95 1.5 0.0 0.8 5.6 123 chr2R 16926860 intron Pkc53E + chr2R 16926922 intron Pkc53E + chr2R 16926983 intron Pkc53E + chr2R_10_16925001 chr2R_16925001 RAL-804 560 chr2R 16975204 16975222 chr2R 16975281 16975298 5 77 1.0 1.5 1.2 2.3 94 chr2R 16975204 intron Cbp53E + chr2R 16975251 intron Cbp53E + chr2R 16975298 intron Cbp53E + chr2R_5_16975001 chr2R_16975001 RAL-804 561 chr2R 16986244 16986271 chr2R 16986343 16986370 4 99 0.0 2.5 1.2 1.8 126 chr2R 16986244 intron Cbp53E + chr2R 16986307 intron Cbp53E + chr2R 16986370 intron Cbp53E + chr2R_4_16985001 chr2R_16985001 RAL-804 562 chr2R 17079054 17079086 chr2R 17079136 17079167 4 82 0.5 0.5 0.5 2.7 113 chr2R 17079054 intron CG30460 - chr2R 17079110 intron CG30460 - chr2R 17079167 intron CG30460 - chr2R_4_17075001 chr2R_17075001 RAL-804 563 chr2R 17147253 17147259 chr2R 17152284 17152290 jockey 5 5031 3.5 3.5 3.5 1.1 5037 chr2R 17147253 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152290 intergenic not near genes chr2R_5_17145001 chr2R_17145001 RAL-804 564 chr2R 17157074 17157089 chr2R 17157177 17157192 7 103 5.5 3.0 4.2 1.3 118 chr2R 17157074 3` UTR,3` UTR CG17290 +,CG17287 - chr2R 17157133 3` UTR CG17287 - chr2R 17157192 exon CG17287 - chr2R_7_17155001 chr2R_17155001 RAL-804 565 chr2R 17176369 17176389 chr2R 17182559 17182579 diver 8 6190 2.5 2.0 2.2 2.5 6210 chr2R 17176369 intergenic not near genes chr2R 17179474 intergenic not near genes chr2R 17182579 intergenic not near genes chr2R_8_17175001 chr2R_17175001 RAL-804 566 chr2R 17236507 17236541 chr2R 17241710 17241745 copia 10 5204 1.5 1.0 1.2 4.5 5238 chr2R 17236507 intron mbl + chr2R 17239126 intron mbl + chr2R 17241745 intron mbl + chr2R_10_17235001 chr2R_17235001 RAL-804 567 chr2R 17389677 17389693 chr2R 17389778 17389794 5 101 2.5 5.5 4.0 1.0 117 chr2R 17389677 intergenic not near genes chr2R 17389736 intergenic not near genes chr2R 17389794 intergenic not near genes chr2R_5_17385001 chr2R_17385001 RAL-804 568 chr2R 17435821 17435823 chr2R 17435868 17435884 9 63 1.5 3.0 2.2 2.8 63 chr2R 17435821 intron EDTP - chr2R 17435852 intron EDTP - chr2R 17435884 intron EDTP - chr2R_9_17435001 chr2R_17435001 RAL-804 569 chr2R 17485919 17485948 chr2R 17490689 17490716 F-element 10 4770 0.0 0.5 0.2 8.3 4797 chr2R 17485919 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488318 intron NT5E-2 + chr2R 17490716 intron NT5E-2 + chr2R_10_17485001 chr2R_17485001 RAL-804 570 chr2R 17640111 17640135 chr2R 17640345 17640369 10 232 4.0 7.0 5.5 1.5 258 chr2R 17640111 intergenic not near genes chr2R 17640240 intergenic not near genes chr2R 17640369 intergenic not near genes chr2R_10_17640001 chr2R_17640001 RAL-804 571 chr2R 17709988 17710014 chr2R 17710079 17710104 5 90 2.0 3.0 2.5 1.4 116 chr2R 17709988 intron CG6424 - chr2R 17710046 intron CG6424 - chr2R 17710104 intron CG6424 - chr2R_5_17710001 chr2R_17710001 RAL-804 572 chr2R 17784030 17784049 chr2R 17784269 17784290 pogo 7 240 3.5 7.0 5.2 1.1 260 chr2R 17784030 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784290 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 RAL-804 573 chr2R 17801282 17801312 chr2R 17801364 17801395 8 84 2.0 1.5 1.8 2.9 113 chr2R 17801282 3` UTR,intron CR45270 -,grh + chr2R 17801338 3` UTR,intron CR45270 -,grh + chr2R 17801395 3` UTR,intron CR45270 -,grh + chr2R_8_17800001 chr2R_17800001 RAL-804 574 chr2R 17805722 17805731 chr2R 17805950 17805959 4 228 0.0 2.0 1.0 2.0 237 chr2R 17805722 intron grh + chr2R 17805840 intron grh + chr2R 17805959 intron grh + chr2R_4_17805001 chr2R_17805001 RAL-804 575 chr2R 17886639 17886657 chr2R 17886721 17886739 4 82 0.5 1.0 0.8 2.2 100 chr2R 17886639 intron Elk + chr2R 17886689 intron Elk + chr2R 17886739 intron Elk + chr2R_4_17885001 chr2R_17885001 RAL-804 576 chr2R 17896120 17896137 chr2R 17896419 17896440 5 302 1.5 1.0 1.2 2.3 320 chr2R 17896120 intron Elk + chr2R 17896280 intron Elk + chr2R 17896440 intron Elk + chr2R_5_17895001 chr2R_17895001 RAL-804 577 chr2R 17929126 17929148 chr2R 17929219 17929238 6 91 3.5 3.0 3.2 1.4 112 chr2R 17929126 intergenic not near genes chr2R 17929182 intergenic not near genes chr2R 17929238 intergenic not near genes chr2R_6_17925001 chr2R_17925001 RAL-804 578 chr2R 17944113 17944146 chr2R 17944216 17944249 10 102 3.5 4.5 4.0 2.0 136 chr2R 17944113 intergenic not near genes chr2R 17944181 intergenic not near genes chr2R 17944249 intergenic not near genes chr2R_10_17940001 chr2R_17940001 RAL-804 579 chr2R 17961034 17961064 chr2R 17961139 17961142 6 94 1.5 0.5 1.0 3.0 108 chr2R 17961034 intergenic not near genes chr2R 17961088 intergenic not near genes chr2R 17961142 intergenic not near genes chr2R_6_17960001 chr2R_17960001 RAL-804 580 chr2R 18021553 18021563 chr2R 18022043 18022052 4 490 7.5 17.0 12.2 0.3 499 chr2R 18021553 exon CG10910 + chr2R 18021802 exon CG10910 + chr2R 18022052 exon CG10910 + chr2R_4_18020001 chr2R_18020001 RAL-804 581 chr2R 18045669 18045690 chr2R 18046021 18046041 jockey 4 352 2.5 0.5 1.5 1.6 372 chr2R 18045669 intergenic not near genes chr2R 18045855 intergenic not near genes chr2R 18046041 intergenic CG5767 - chr2R_4_18045001 chr2R_18045001 RAL-804 582 chr2R 18054793 18054818 chr2R 18055287 18055312 6 494 2.5 1.5 2.0 2.0 519 chr2R 18054793 intergenic CR45313 + chr2R 18055052 5` UTR CR45313 + chr2R 18055312 5` UTR CR45313 + chr2R_6_18055001 chr2R_18055001 RAL-804 583 chr2R 18111687 18111700 chr2R 18115554 18115568 F-element 4 3868 3.0 3.0 3.0 1.0 3881 chr2R 18111687 intergenic not near genes chr2R 18113628 intergenic not near genes chr2R 18115568 intergenic not near genes chr2R_4_18110001 chr2R_18110001 RAL-804 584 chr2R 18124341 18124371 chr2R 18124418 18124448 8 77 4.0 1.0 2.5 2.3 107 chr2R 18124341 intron stau - chr2R 18124394 intron stau - chr2R 18124448 intron stau - chr2R_8_18120001 chr2R_18120001 RAL-804 585 chr2R 18204141 18204156 chr2R 18204226 18204241 4 85 1.0 0.0 0.5 2.7 100 chr2R 18204141 intergenic not near genes chr2R 18204191 intergenic not near genes chr2R 18204241 intergenic not near genes chr2R_4_18200001 chr2R_18200001 RAL-804 586 chr2R 18219633 18219656 chr2R 18219714 18219738 7 81 6.0 4.5 5.2 1.1 105 chr2R 18219633 intergenic not near genes chr2R 18219686 intergenic not near genes chr2R 18219738 intergenic not near genes chr2R_7_18215001 chr2R_18215001 RAL-804 587 chr2R 18289442 18289455 chr2R 18289533 18289556 6 99 1.5 2.5 2.0 2.0 114 chr2R 18289442 intron,intron sbb -,CG14502 + chr2R 18289499 intron,intron sbb -,CG14502 + chr2R 18289556 exon,intron sbb -,CG14502 + chr2R_6_18285001 chr2R_18285001 RAL-804 588 chr2R 18408283 18408315 chr2R 18408404 18408436 13 119 4.0 5.0 4.5 2.4 153 chr2R 18408283 exon GstE8 + chr2R 18408360 exon GstE8 + chr2R 18408436 exon GstE8 + chr2R_13_18405001 chr2R_18405001 RAL-804 589 chr2R 18509583 18509612 chr2R 18509725 18509754 8 142 4.0 1.0 2.5 2.3 171 chr2R 18509583 intergenic not near genes chr2R 18509668 intergenic not near genes chr2R 18509754 intergenic not near genes chr2R_8_18505001 chr2R_18505001 RAL-804 590 chr2R 18515900 18515912 chr2R 18516109 18516121 5 208 2.5 0.5 1.5 2.0 221 chr2R 18515900 intron CG43066 + chr2R 18516010 intron CG43066 + chr2R 18516121 intron CG43066 + chr2R_5_18515001 chr2R_18515001 RAL-804 591 chr2R 18526594 18526620 chr2R 18526673 18526702 5 80 2.0 4.0 3.0 1.2 108 chr2R 18526594 intergenic CG43066 + chr2R 18526648 intergenic CG43066 + chr2R 18526702 intergenic CG43066 + chr2R_5_18525001 chr2R_18525001 RAL-804 592 chr2R 18550575 18550610 chr2R 18550664 18550699 9 88 3.5 1.5 2.5 2.6 124 chr2R 18550575 intergenic not near genes chr2R 18550637 intergenic not near genes chr2R 18550699 intergenic not near genes chr2R_9_18550001 chr2R_18550001 RAL-804 593 chr2R 18575814 18575830 chr2R 18581983 18582014 3S18 8 6182 2.5 4.0 3.2 1.9 6200 chr2R 18575814 intron GEFmeso - chr2R 18578914 intron GEFmeso - chr2R 18582014 intron GEFmeso - chr2R_8_18575001 chr2R_18575001 RAL-804 594 chr2R 18585803 18585817 chr2R 18585881 18585895 7 77 8.5 4.0 6.2 1.0 92 chr2R 18585803 intron GEFmeso - chr2R 18585849 intron GEFmeso - chr2R 18585895 intron GEFmeso - chr2R_7_18585001 chr2R_18585001 RAL-804 595 chr2R 18590865 18590899 chr2R 18600017 18600032 roo 10 9149 1.5 2.5 2.0 3.3 9167 chr2R 18590865 intron GEFmeso - chr2R 18595448 intron GEFmeso - chr2R 18600032 intron GEFmeso - chr2R_10_18595001 chr2R_18595001 RAL-804 596 chr2R 18605134 18605154 chr2R 18605226 18605246 4 92 3.5 1.0 2.2 1.2 112 chr2R 18605134 intron GEFmeso - chr2R 18605190 intron GEFmeso - chr2R 18605246 intron GEFmeso - chr2R_4_18605001 chr2R_18605001 RAL-804 597 chr2R 18692900 18692920 chr2R 18692987 18693006 10 86 2.5 2.0 2.2 3.1 106 chr2R 18692900 intron Sik3 + chr2R 18692953 intron Sik3 + chr2R 18693006 intron Sik3 + chr2R_10_18690001 chr2R_18690001 RAL-804 598 chr2R 18785913 18785946 chr2R 18785992 18786025 10 79 3.0 4.0 3.5 2.2 112 chr2R 18785913 intron CG15080 + chr2R 18785969 intron CG15080 + chr2R 18786025 intron CG15080 + chr2R_10_18785001 chr2R_18785001 RAL-804 599 chr2R 18855194 18855221 chr2R 18855264 18855270 9 67 3.0 2.5 2.8 2.4 76 chr2R 18855194 intergenic Jheh1 - chr2R 18855232 intergenic Jheh1 - chr2R 18855270 intergenic Jheh1 -,Jheh2 - chr2R_9_18855001 chr2R_18855001 RAL-804 600 chr2R 18930461 18930473 chr2R 18930554 18930566 7 93 1.5 2.5 2.0 2.3 105 chr2R 18930461 intron sano + chr2R 18930514 intron sano + chr2R 18930566 intron sano + chr2R_7_18930001 chr2R_18930001 RAL-804 601 chr2R 18992018 18992049 chr2R 18992159 18992190 4 140 2.0 1.5 1.8 1.4 172 chr2R 18992018 intron tn + chr2R 18992104 intron tn + chr2R 18992190 intron tn + chr2R_4_18990001 chr2R_18990001 RAL-804 602 chr2R 19026977 19026991 chr2R 19027056 19027070 4 79 3.5 0.0 1.8 1.4 93 chr2R 19026977 intron 5-HT1B - chr2R 19027024 intron 5-HT1B - chr2R 19027070 intron 5-HT1B - chr2R_4_19025001 chr2R_19025001 RAL-804 603 chr2R 19114118 19114145 chr2R 19114342 19114369 7 224 2.5 3.5 3.0 1.8 251 chr2R 19114118 exon 5-HT1A + chr2R 19114244 intron 5-HT1A + chr2R 19114369 intron 5-HT1A + chr2R_7_19110001 chr2R_19110001 RAL-804 604 chr2R 19300966 19300992 chr2R 19301045 19301075 10 83 3.0 4.5 3.8 2.1 109 chr2R 19300966 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301075 intron Tab2 + chr2R_10_19300001 chr2R_19300001 RAL-804 605 chr2R 19384024 19384046 chr2R 19384130 19384154 7 108 6.0 6.0 6.0 1.0 130 chr2R 19384024 exon CG10073 + chr2R 19384089 exon CG10073 + chr2R 19384154 intron CG10073 + chr2R_7_19380001 chr2R_19380001 RAL-804 606 chr2R 19536465 19536496 chr2R 19536547 19536578 5 82 2.5 4.0 3.2 1.2 113 chr2R 19536465 intron sm - chr2R 19536522 intron sm - chr2R 19536578 intron sm - chr2R_5_19535001 chr2R_19535001 RAL-804 607 chr2R 19540947 19540982 chr2R 19542336 19542371 10 1389 5.5 5.0 5.2 1.6 1424 chr2R 19540947 intron sm - chr2R 19541659 intron sm - chr2R 19542371 intron sm - chr2R_10_19540001 chr2R_19540001 RAL-804 608 chr2R 19776600 19776629 chr2R 19779923 19779952 jockey 9 3323 1.5 0.5 1.0 4.5 3352 chr2R 19776600 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779952 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-804 609 chr2R 19822054 19822090 chr2R 19822490 19822526 11 435 2.5 3.0 2.8 2.9 472 chr2R 19822054 intergenic not near genes chr2R 19822290 intergenic not near genes chr2R 19822526 intergenic not near genes chr2R_11_19820001 chr2R_19820001 RAL-804 610 chr2R 19834631 19834659 chr2R 19834717 19834745 6 84 1.0 1.0 1.0 3.0 114 chr2R 19834631 intergenic not near genes chr2R 19834688 intergenic not near genes chr2R 19834745 intergenic not near genes chr2R_6_19830001 chr2R_19830001 RAL-804 611 chr2R 19943274 19943295 chr2R 19943384 19943405 7 110 0.5 3.5 2.0 2.3 131 chr2R 19943274 intergenic not near genes chr2R 19943340 intergenic not near genes chr2R 19943405 intergenic not near genes chr2R_7_19940001 chr2R_19940001 RAL-804 612 chr2R 19957443 19957463 chr2R 19962631 19962636 copia 4 5191 2.5 5.5 4.0 0.8 5193 chr2R 19957443 intergenic CG44623 + chr2R 19960040 intergenic not near genes chr2R 19962636 intergenic not near genes chr2R_4_19960001 chr2R_19960001 RAL-804 613 chr2R 20069242 20069259 chr2R 20071872 20071889 opus 6 2629 4.0 2.5 3.2 1.4 2647 chr2R 20069242 intergenic not near genes chr2R 20070566 intergenic not near genes chr2R 20071889 intergenic not near genes chr2R_6_20070001 chr2R_20070001 RAL-804 614 chr2R 20079861 20079871 chr2R 20079943 20079953 4 82 0.0 6.5 3.2 1.0 92 chr2R 20079861 intergenic not near genes chr2R 20079907 intergenic not near genes chr2R 20079953 intergenic not near genes chr2R_4_20075001 chr2R_20075001 RAL-804 615 chr2R 20179383 20179409 chr2R 20179457 20179485 6 74 3.5 2.5 3.0 1.5 102 chr2R 20179383 intergenic not near genes chr2R 20179434 intergenic not near genes chr2R 20179485 intergenic not near genes chr2R_6_20175001 chr2R_20175001 RAL-804 616 chr2R 20199228 20199243 chr2R 20199305 20199320 5 77 0.5 1.0 0.8 2.8 92 chr2R 20199228 intergenic not near genes chr2R 20199274 intergenic not near genes chr2R 20199320 intergenic not near genes chr2R_5_20195001 chr2R_20195001 RAL-804 617 chr2R 20223954 20223973 chr2R 20224039 20224058 6 84 2.0 0.0 1.0 3.0 104 chr2R 20223954 intergenic not near genes chr2R 20224006 intergenic not near genes chr2R 20224058 intergenic not near genes chr2R_6_20220001 chr2R_20220001 RAL-804 618 chr2R 20326761 20326789 chr2R 20326838 20326866 14 76 1.5 1.5 1.5 5.6 105 chr2R 20326761 5` UTR MED8 - chr2R 20326814 intergenic MED8 -,CG8929 + chr2R 20326866 intergenic MED8 -,CG8929 + chr2R_14_20325001 chr2R_20325001 RAL-804 619 chr2R 20340364 20340374 chr2R 20340449 20340459 6 85 7.5 5.5 6.5 0.8 95 chr2R 20340364 intergenic not near genes chr2R 20340412 intergenic not near genes chr2R 20340459 intergenic not near genes chr2R_6_20340001 chr2R_20340001 RAL-804 620 chr2R 20433398 20433426 chr2R 20433602 20433630 9 202 4.0 4.5 4.2 1.7 232 chr2R 20433398 intron CG12484 + chr2R 20433514 intron CG12484 + chr2R 20433630 intron CG12484 + chr2R_9_20430001 chr2R_20430001 RAL-804 621 chr2R 20500823 20500825 chr2R 20501441 20501446 4 620 4.0 5.5 4.8 0.7 623 chr2R 20500823 intergenic not near genes chr2R 20501134 intergenic not near genes chr2R 20501446 intergenic not near genes chr2R_4_20500001 chr2R_20500001 RAL-804 622 chr2R 20500833 20500845 chr2R 20501438 20501465 8 617 2.5 5.0 3.8 1.7 632 chr2R 20500833 intergenic not near genes chr2R 20501149 intergenic not near genes chr2R 20501465 intergenic not near genes chr2R_8_20500001 chr2R_20500001 RAL-804 623 chr2R 20538753 20538779 chr2R 20538839 20538863 7 85 1.5 3.0 2.2 2.2 110 chr2R 20538753 intergenic CG13427 -,CG13423 + chr2R 20538808 intergenic CG13427 - chr2R 20538863 intergenic CG13427 - chr2R_7_20535001 chr2R_20535001 RAL-804 624 chr2R 20541989 20542009 chr2R 20542067 20542087 4 78 2.0 0.5 1.2 1.8 98 chr2R 20541989 intergenic not near genes chr2R 20542038 intergenic not near genes chr2R 20542087 intergenic not near genes chr2R_4_20540001 chr2R_20540001 RAL-804 625 chr2R 20642485 20642494 chr2R 20642562 20642570 4 77 5.5 0.0 2.8 1.1 85 chr2R 20642485 3` UTR,3` UTR,3` UTR CG11110 +,CG33785 -,CG33786 - chr2R 20642528 3` UTR,3` UTR,3` UTR CG11110 +,CG33785 -,CG33786 - chr2R 20642570 3` UTR,3` UTR CG33785 -,CG33786 - chr2R_4_20640001 chr2R_20640001 RAL-804 626 chr2R 20739442 20739477 chr2R 20744209 20744245 F-element 12 4768 5.5 2.5 4.0 2.4 4803 chr2R 20739442 intron dpr + chr2R 20741844 intron dpr + chr2R 20744245 intron dpr + chr2R_12_20740001 chr2R_20740001 RAL-804 627 chr2R 20776533 20776561 chr2R 20776611 20776639 4 78 1.5 1.0 1.2 1.8 106 chr2R 20776533 intergenic CG43709 -,CG43710 - chr2R 20776586 intergenic CG43710 -,CG43709 - chr2R 20776639 intergenic CG43710 -,CG43709 - chr2R_4_20775001 chr2R_20775001 RAL-804 628 chr2R 20832743 20832755 chr2R 20832820 20832833 4 78 0.0 0.0 0.0 4.0 90 chr2R 20832743 intron,intron insc -,sktl - chr2R 20832788 intron,intron insc -,sktl - chr2R 20832833 intron,intron insc -,sktl - chr2R_4_20830001 chr2R_20830001 RAL-804 629 chr2R 20863119 20863136 chr2R 20863205 20863222 7 86 5.0 1.5 3.2 1.7 103 chr2R 20863119 intergenic not near genes chr2R 20863170 intergenic not near genes chr2R 20863222 intergenic not near genes chr2R_7_20860001 chr2R_20860001 RAL-804 630 chr2R 20962907 20962936 chr2R 20963005 20963034 6 98 0.5 4.5 2.5 1.7 127 chr2R 20962907 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963034 intergenic not near genes chr2R_6_20960001 chr2R_20960001 RAL-804 631 chr2R 21039000 21039015 chr2R 21039108 21039125 6 110 2.5 6.0 4.2 1.2 125 chr2R 21039000 intergenic not near genes chr2R 21039062 intergenic not near genes chr2R 21039125 intergenic not near genes chr2R_6_21035001 chr2R_21035001 RAL-804 632 chr2R 21129767 21129797 chr2R 21129844 21129858 11 71 4.0 3.5 3.8 2.3 91 chr2R 21129767 3` UTR Magi - chr2R 21129812 3` UTR Magi - chr2R 21129858 3` UTR Magi - chr2R_11_21125001 chr2R_21125001 RAL-804 633 chr2R 21141117 21141149 chr2R 21141213 21141245 8 96 0.0 3.0 1.5 3.2 128 chr2R 21141117 intron Magi - chr2R 21141181 intron Magi - chr2R 21141245 intron Magi - chr2R_8_21140001 chr2R_21140001 RAL-804 634 chr2R 21194028 21194034 chr2R 21194113 21194119 4 85 1.5 8.0 4.8 0.7 91 chr2R 21194028 intron Lapsyn + chr2R 21194074 intron Lapsyn + chr2R 21194119 intron Lapsyn + chr2R_4_21190001 chr2R_21190001 RAL-804 635 chr2R 21472311 21472339 chr2R 21472389 21472416 6 78 1.5 2.5 2.0 2.0 105 chr2R 21472311 intron Sdc - chr2R 21472364 intron Sdc - chr2R 21472416 intron Sdc - chr2R_6_21470001 chr2R_21470001 RAL-804 636 chr2R 21534458 21534491 chr2R 21534550 21534569 7 86 0.5 3.5 2.0 2.3 111 chr2R 21534458 intron Egfr + chr2R 21534514 intron Egfr + chr2R 21534569 intron Egfr + chr2R_7_21530001 chr2R_21530001 RAL-804 637 chr2R 21585229 21585247 chr2R 21585308 21585326 5 79 3.0 3.5 3.2 1.2 97 chr2R 21585229 3` UTR CG30222 + chr2R 21585278 3` UTR CG30222 + chr2R 21585326 3` UTR CG30222 + chr2R_5_21585001 chr2R_21585001 RAL-804 638 chr2R 21642016 21642032 chr2R 21642097 21642110 5 79 1.5 3.0 2.2 1.6 94 chr2R 21642016 intergenic not near genes chr2R 21642063 intergenic not near genes chr2R 21642110 intergenic not near genes chr2R_5_21640001 chr2R_21640001 RAL-804 639 chr2R 21688317 21688342 chr2R 21688403 21688405 10 83 2.5 3.5 3.0 2.5 88 chr2R 21688317 exon CG30285 - chr2R 21688361 exon CG30285 - chr2R 21688405 intron CG30285 - chr2R_10_21685001 chr2R_21685001 RAL-804 640 chr2R 21700162 21700183 chr2R 21700247 21700269 8 86 3.5 4.0 3.8 1.7 107 chr2R 21700162 intron HmgZ - chr2R 21700216 intron HmgZ - chr2R 21700269 intron HmgZ - chr2R_8_21700001 chr2R_21700001 RAL-804 641 chr2R 21730876 21730889 chr2R 21730983 21730996 4 104 5.5 2.5 4.0 0.8 120 chr2R 21730876 intergenic not near genes chr2R 21730936 intergenic not near genes chr2R 21730996 intergenic not near genes chr2R_4_21730001 chr2R_21730001 RAL-804 642 chr2R 21738279 21738310 chr2R 21747435 21747470 roo 12 9155 1.0 3.5 2.2 3.8 9191 chr2R 21738279 intergenic not near genes chr2R 21742874 intergenic not near genes chr2R 21747470 intergenic not near genes chr2R_12_21740001 chr2R_21740001 RAL-804 643 chr2R 21753082 21753095 chr2R 21753567 21753580 roo 6 485 5.5 5.0 5.2 1.0 498 chr2R 21753082 intergenic not near genes chr2R 21753331 intergenic not near genes chr2R 21753580 intergenic not near genes chr2R_6_21750001 chr2R_21750001 RAL-804 644 chr2R 21809540 21809552 chr2R 21817780 21817792 roo 10 8240 3.0 7.5 5.2 1.6 8252 chr2R 21809540 intergenic not near genes chr2R 21813666 intergenic not near genes chr2R 21817792 intergenic not near genes chr2R_10_21810001 chr2R_21810001 RAL-804 645 chr2R 21818876 21818910 chr2R 21818963 21818997 8 86 3.5 0.5 2.0 2.7 121 chr2R 21818876 intergenic not near genes chr2R 21818936 intergenic not near genes chr2R 21818997 intergenic not near genes chr2R_8_21815001 chr2R_21815001 RAL-804 646 chr2R 21840819 21840826 chr2R 21840873 21840902 4 66 3.5 3.5 3.5 0.9 83 chr2R 21840819 intergenic not near genes chr2R 21840860 intergenic not near genes chr2R 21840902 intergenic not near genes chr2R_4_21840001 chr2R_21840001 RAL-804 647 chr2R 21857345 21857364 chr2R 21857436 21857447 6 90 5.0 2.5 3.8 1.2 102 chr2R 21857345 intergenic not near genes chr2R 21857396 intergenic not near genes chr2R 21857447 intergenic not near genes chr2R_6_21855001 chr2R_21855001 RAL-804 648 chr2R 21912440 21912463 chr2R 21912725 21912748 6 283 4.0 2.0 3.0 1.5 308 chr2R 21912440 intron Fili + chr2R 21912594 intron Fili + chr2R 21912748 intron Fili + chr2R_6_21910001 chr2R_21910001 RAL-804 649 chr2R 21963196 21963218 chr2R 21963281 21963303 9 85 4.5 0.0 2.2 2.8 107 chr2R 21963196 intergenic not near genes chr2R 21963250 intergenic not near genes chr2R 21963303 intergenic not near genes chr2R_9_21960001 chr2R_21960001 RAL-804 650 chr2R 21985541 21985562 chr2R 21985622 21985643 6 81 3.5 1.5 2.5 1.7 102 chr2R 21985541 intergenic CG30401 - chr2R 21985592 intergenic CG30401 - chr2R 21985643 3` UTR CG30401 - chr2R_6_21985001 chr2R_21985001 RAL-804 651 chr2R 22014213 22014231 chr2R 22014289 22014307 9 75 1.0 3.5 2.2 2.8 94 chr2R 22014213 intron CG34370 - chr2R 22014260 intron CG34370 - chr2R 22014307 intron CG34370 - chr2R_9_22010001 chr2R_22010001 RAL-804 652 chr2R 22029489 22029501 chr2R 22029627 22029639 5 138 0.5 0.5 0.5 3.3 150 chr2R 22029489 intron CG34370 - chr2R 22029564 intron CG34370 - chr2R 22029639 intron CG34370 - chr2R_5_22025001 chr2R_22025001 RAL-804 653 chr2R 22040155 22040182 chr2R 22040234 22040263 6 78 1.5 2.0 1.8 2.1 108 chr2R 22040155 intergenic not near genes chr2R 22040209 intergenic not near genes chr2R 22040263 intergenic not near genes chr2R_6_22040001 chr2R_22040001 RAL-804 654 chr2R 22095963 22095995 chr2R 22096046 22096078 9 83 1.0 1.0 1.0 4.5 115 chr2R 22095963 intron CG11073 - chr2R 22096020 intron CG11073 - chr2R 22096078 intron CG11073 - chr2R_9_22095001 chr2R_22095001 RAL-804 655 chr2R 22096575 22096596 chr2R 22097911 22097931 6 1335 5.5 21.0 13.2 0.4 1356 chr2R 22096575 intron CG11073 - chr2R 22097253 intron CG11073 - chr2R 22097931 intron CG11073 - chr2R_6_22095001 chr2R_22095001 RAL-804 656 chr2R 22185673 22185704 chr2R 22185772 22185803 7 99 3.5 0.0 1.8 2.5 130 chr2R 22185673 3` UTR MED16 + chr2R 22185738 3` UTR MED16 + chr2R 22185803 3` UTR MED16 + chr2R_7_22185001 chr2R_22185001 RAL-804 657 chr2R 22189446 22189474 chr2R 22189573 22189599 13 126 1.0 1.5 1.2 5.9 153 chr2R 22189446 3` UTR Vps35 + chr2R 22189522 3` UTR Vps35 + chr2R 22189599 3` UTR Vps35 + chr2R_13_22185001 chr2R_22185001 RAL-804 658 chr2R 22290080 22290103 chr2R 22290164 22290187 8 84 2.5 1.5 2.0 2.7 107 chr2R 22290080 intergenic not near genes chr2R 22290134 intergenic not near genes chr2R 22290187 intergenic not near genes chr2R_8_22290001 chr2R_22290001 RAL-804 659 chr2R 22349693 22349722 chr2R 22351477 22351506 jockey 10 1782 3.0 3.0 3.0 2.5 1813 chr2R 22349693 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351506 intron Liprin-gamma - chr2R_10_22350001 chr2R_22350001 RAL-804 660 chr2R 22360380 22360400 chr2R 22360813 22360827 jockey 7 432 4.5 2.0 3.2 1.7 447 chr2R 22360380 intron Liprin-gamma - chr2R 22360604 intron Liprin-gamma - chr2R 22360827 intron Liprin-gamma - chr2R_7_22360001 chr2R_22360001 RAL-804 661 chr2R 22371058 22371064 chr2R 22371433 22371443 6 378 7.5 0.0 3.8 1.2 385 chr2R 22371058 intron Liprin-gamma - chr2R 22371250 intron Liprin-gamma - chr2R 22371443 intron Liprin-gamma - chr2R_6_22370001 chr2R_22370001 RAL-804 662 chr2R 22499851 22499885 chr2R 22499926 22499961 9 76 0.5 2.0 1.2 4.1 110 chr2R 22499851 intron px - chr2R 22499906 intron px - chr2R 22499961 intron px - chr2R_9_22495001 chr2R_22495001 RAL-804 663 chr2R 22517351 22517371 chr2R 22519387 22519413 8 2044 16.5 21.0 18.8 0.4 2062 chr2R 22517351 intron px - chr2R 22518382 intron px - chr2R 22519413 intron px - chr2R_8_22515001 chr2R_22515001 RAL-804 664 chr2R 22525746 22525784 chr2R 22529300 22529311 jockey 7 3548 1.0 2.0 1.5 2.8 3565 chr2R 22525746 intron px - chr2R 22527528 intron px - chr2R 22529311 intron px - chr2R_7_22525001 chr2R_22525001 RAL-804 665 chr2R 22573291 22573303 chr2R 22573419 22573431 6 126 3.5 4.5 4.0 1.2 140 chr2R 22573291 intron dnr1 - chr2R 22573361 intron dnr1 - chr2R 22573431 intron dnr1 - chr2R_6_22570001 chr2R_22570001 RAL-804 666 chr2R 22574172 22574187 chr2R 22574252 22574267 6 80 1.5 6.0 3.8 1.2 95 chr2R 22574172 intron dnr1 - chr2R 22574220 intron dnr1 - chr2R 22574267 intron dnr1 - chr2R_6_22570001 chr2R_22570001 RAL-804 667 chr2R 22620828 22620859 chr2R 22620928 22620951 9 99 1.0 1.5 1.2 4.1 123 chr2R 22620828 5` UTR CG33143 + chr2R 22620890 5` UTR CG33143 + chr2R 22620951 5` UTR CG33143 + chr2R_9_22620001 chr2R_22620001 RAL-804 668 chr2R 22623459 22623486 chr2R 22623594 22623626 8 139 2.5 6.0 4.2 1.5 167 chr2R 22623459 intron CG33143 + chr2R 22623542 intron CG33143 + chr2R 22623626 intron CG33143 + chr2R_8_22620001 chr2R_22620001 RAL-804 669 chr2R 22680619 22680632 chr2R 22680696 22680710 6 78 4.5 0.0 2.2 1.9 91 chr2R 22680619 intergenic not near genes chr2R 22680664 intergenic not near genes chr2R 22680710 intergenic not near genes chr2R_6_22680001 chr2R_22680001 RAL-804 670 chr2R 22756554 22756581 chr2R 22756631 22756658 12 76 4.5 3.5 4.0 2.4 104 chr2R 22756554 intron,intron CG42260 -,CR30267 + chr2R 22756606 intron,intron CG42260 -,CR30267 + chr2R 22756658 intron,intron CG42260 -,CR30267 + chr2R_12_22755001 chr2R_22755001 RAL-804 671 chr2R 22774965 22774995 chr2R 22775384 22775414 jockey 8 419 5.0 1.5 3.2 1.9 449 chr2R 22774965 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775414 intron CG42260 - chr2R_8_22775001 chr2R_22775001 RAL-804 672 chr2R 22907407 22907430 chr2R 22907493 22907523 5 92 3.5 1.5 2.5 1.4 116 chr2R 22907407 intron nahoda + chr2R 22907465 intron nahoda + chr2R 22907523 intron nahoda + chr2R_5_22905001 chr2R_22905001 RAL-804 673 chr2R 22916430 22916445 chr2R 22918878 22918896 7 2449 16.0 11.5 13.8 0.5 2466 chr2R 22916430 3` UTR nahoda + chr2R 22917663 exon CG30187 - chr2R 22918896 intergenic Nup214 -,CG30187 - chr2R_7_22915001 chr2R_22915001 RAL-804 674 chr2R 22988313 22988323 chr2R 22988393 22988404 4 81 3.5 6.5 5.0 0.7 91 chr2R 22988313 intron twi + chr2R 22988358 intron twi + chr2R 22988404 intron twi + chr2R_4_22985001 chr2R_22985001 RAL-804 675 chr2R 23029614 23029637 chr2R 23029690 23029713 6 77 1.5 2.5 2.0 2.0 99 chr2R 23029614 intron,intron twi +,CG42741 - chr2R 23029664 intron,intron twi +,CG42741 - chr2R 23029713 intron,intron twi +,CG42741 - chr2R_6_23025001 chr2R_23025001 RAL-804 676 chr2R 23052654 23052687 chr2R 23052730 23052763 7 76 5.0 7.0 6.0 1.0 109 chr2R 23052654 intergenic not near genes chr2R 23052708 intergenic not near genes chr2R 23052763 intergenic not near genes chr2R_7_23050001 chr2R_23050001 RAL-804 677 chr2R 23138447 23138458 chr2R 23138532 23138543 8 85 4.5 2.5 3.5 1.8 96 chr2R 23138447 intergenic CG30192 + chr2R 23138495 intergenic CG30192 + chr2R 23138543 intergenic CG30192 + chr2R_8_23135001 chr2R_23135001 RAL-804 678 chr2R 23175047 23175067 chr2R 23175122 23175141 5 76 4.0 4.5 4.2 1.0 94 chr2R 23175047 intron CG34371 - chr2R 23175094 intron CG34371 - chr2R 23175141 intron CG34371 - chr2R_5_23175001 chr2R_23175001 RAL-804 679 chr2R 23219010 23219025 chr2R 23219249 23219264 4 239 3.5 0.0 1.8 1.4 254 chr2R 23219010 intergenic not near genes chr2R 23219137 intergenic not near genes chr2R 23219264 intergenic not near genes chr2R_4_23215001 chr2R_23215001 RAL-804 680 chr2R 23275663 23275682 chr2R 23275743 23275774 8 90 3.0 2.5 2.8 2.1 111 chr2R 23275663 intergenic ord - chr2R 23275718 intergenic ord - chr2R 23275774 intergenic ord - chr2R_8_23275001 chr2R_23275001 RAL-804 681 chr2R 23291331 23291339 chr2R 23291409 23291417 4 78 5.0 1.0 3.0 1.0 86 chr2R 23291331 3` UTR CR44783 - chr2R 23291374 3` UTR CR44783 - chr2R 23291417 intergenic CR44783 - chr2R_4_23290001 chr2R_23290001 RAL-804 682 chr2R 23346527 23346556 chr2R 23346603 23346632 6 76 0.0 4.5 2.2 1.9 105 chr2R 23346527 intron CG3502 - chr2R 23346580 intron CG3502 - chr2R 23346632 intron CG3502 - chr2R_6_23345001 chr2R_23345001 RAL-804 683 chr2R 23369384 23369407 chr2R 23369450 23369479 12 74 4.5 6.5 5.5 1.8 95 chr2R 23369384 exon Ice1 + chr2R 23369432 exon Ice1 + chr2R 23369479 exon Ice1 + chr2R_12_23365001 chr2R_23365001 RAL-804 684 chr2R 23423739 23423774 chr2R 23423897 23423932 10 158 2.0 6.5 4.2 1.9 193 chr2R 23423739 intron CG9815 - chr2R 23423836 intron CG9815 - chr2R 23423932 intron CG9815 - chr2R_10_23420001 chr2R_23420001 RAL-804 685 chr2R 23454413 23454438 chr2R 23454492 23454517 10 78 2.0 2.5 2.2 3.1 104 chr2R 23454413 intron CG43795 + chr2R 23454465 intron CG43795 + chr2R 23454517 intron CG43795 + chr2R_10_23450001 chr2R_23450001 RAL-804 686 chr2R 23467572 23467583 chr2R 23467701 23467712 4 130 5.5 4.5 5.0 0.7 140 chr2R 23467572 intron CG43795 + chr2R 23467642 intron CG43795 + chr2R 23467712 intron CG43795 + chr2R_4_23465001 chr2R_23465001 RAL-804 687 chr2R 23493664 23493699 chr2R 23493750 23493785 6 79 2.0 3.5 2.8 1.6 121 chr2R 23493664 intergenic not near genes chr2R 23493724 intergenic not near genes chr2R 23493785 intergenic not near genes chr2R_6_23490001 chr2R_23490001 RAL-804 688 chr2R 23554809 23554831 chr2R 23554886 23554908 5 77 2.5 0.0 1.2 2.3 99 chr2R 23554809 intergenic pita -,Rrp4 - chr2R 23554858 intergenic pita -,Rrp4 - chr2R 23554908 intergenic Rrp4 -,pita - chr2R_5_23550001 chr2R_23550001 RAL-804 689 chr2R 23620081 23620110 chr2R 23620267 23620271 10 182 3.0 4.5 3.8 2.1 190 chr2R 23620081 intergenic not near genes chr2R 23620176 intergenic not near genes chr2R 23620271 intergenic not near genes chr2R_10_23620001 chr2R_23620001 RAL-804 690 chr2R 23653975 23654004 chr2R 23654052 23654078 7 76 2.5 2.0 2.2 2.2 103 chr2R 23653975 3` UTR retn + chr2R 23654026 3` UTR retn + chr2R 23654078 3` UTR retn + chr2R_7_23650001 chr2R_23650001 RAL-804 691 chr2R 23705626 23705639 chr2R 23710904 23710922 5 5280 20.0 28.0 24.0 0.2 5296 chr2R 23705626 exon l(2)not - chr2R 23708274 intron,exon l(2)not -,l(2)tid + chr2R 23710922 intergenic not near genes chr2R_5_23705001 chr2R_23705001 RAL-804 692 chr2R 23914298 23914324 chr2R 23921922 23921947 412 9 7623 3.0 4.0 3.5 2.0 7649 chr2R 23914298 exon kcc + chr2R 23918122 intron kcc + chr2R 23921947 intron kcc + chr2R_9_23915001 chr2R_23915001 RAL-804 693 chr2R 23914326 23914330 chr2R 23921921 23921921 412 4 7607 3.0 4.0 3.5 0.9 7595 chr2R 23914326 exon kcc + chr2R 23918124 intron kcc + chr2R 23921921 intron kcc + chr2R_4_23915001 chr2R_23915001 RAL-804 694 chr2R 23986419 23986452 chr2R 23986502 23986535 11 82 1.0 3.0 2.0 3.7 116 chr2R 23986419 intron Phm - chr2R 23986477 intron Phm - chr2R 23986535 intron Phm - chr2R_11_23985001 chr2R_23985001 RAL-804 695 chr2R 24008413 24008444 chr2R 24008499 24008529 14 85 1.0 4.5 2.8 3.7 116 chr2R 24008413 intron Unc-89 - chr2R 24008471 intron Unc-89 - chr2R 24008529 intron Unc-89 - chr2R_14_24005001 chr2R_24005001 RAL-804 696 chr2R 24031379 24031414 chr2R 24031463 24031498 12 84 3.0 2.0 2.5 3.4 119 chr2R 24031379 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031498 intergenic Chi -,CG30172 - chr2R_12_24030001 chr2R_24030001 RAL-804 697 chr2R 24147093 24147096 chr2R 24154644 24154666 412 4 7567 2.5 2.5 2.5 1.1 7573 chr2R 24147093 intron Dat + chr2R 24150880 intron Dat + chr2R 24154666 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-804 698 chr2R 24166093 24166121 chr2R 24166190 24166219 5 98 1.5 4.5 3.0 1.2 126 chr2R 24166093 intron CG3328 + chr2R 24166156 intron CG3328 + chr2R 24166219 intron CG3328 + chr2R_5_24165001 chr2R_24165001 RAL-804 699 chr2R 24177236 24177259 chr2R 24184721 24184744 412 6 7484 1.0 3.5 2.2 1.9 7508 chr2R 24177236 3` UTR Nop60B + chr2R 24180990 intron Nop60B + chr2R 24184744 3` UTR Nop60B + chr2R_6_24180001 chr2R_24180001 RAL-804 700 chr2R 24303528 24303533 chr2R 24303601 24303608 4 73 5.0 3.0 4.0 0.8 80 chr2R 24303528 intergenic not near genes chr2R 24303568 intergenic not near genes chr2R 24303608 intergenic not near genes chr2R_4_24300001 chr2R_24300001 RAL-804 701 chr2R 24317896 24317913 chr2R 24318014 24318022 6 116 1.5 2.5 2.0 2.0 126 chr2R 24317896 intergenic not near genes chr2R 24317959 intergenic not near genes chr2R 24318022 intergenic not near genes chr2R_6_24315001 chr2R_24315001 RAL-804 702 chr2R 24353427 24353456 chr2R 24361788 24361815 roo 7 8361 2.5 4.0 3.2 1.7 8388 chr2R 24353427 intron,intron bs +,CR44811 - chr2R 24357621 intron,intron bs +,CR44811 - chr2R 24361815 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 RAL-804 703 chr2R 24383836 24383857 chr2R 24383917 24383938 4 81 1.0 2.5 1.8 1.4 102 chr2R 24383836 intron mAChR-A - chr2R 24383887 intron mAChR-A - chr2R 24383938 exon mAChR-A - chr2R_4_24380001 chr2R_24380001 RAL-804 704 chr2R 24470372 24470392 chr2R 24470465 24470487 14 94 1.5 2.5 2.0 4.7 115 chr2R 24470372 intron CG13579 + chr2R 24470430 intron CG13579 + chr2R 24470487 intron CG13579 + chr2R_14_24470001 chr2R_24470001 RAL-804 705 chr2R 24590121 24590144 chr2R 24590203 24590236 7 89 4.0 1.5 2.8 1.8 115 chr2R 24590121 intron pio + chr2R 24590178 intron pio + chr2R 24590236 intron pio + chr2R_7_24590001 chr2R_24590001 RAL-804 706 chr2R 24646710 24646724 chr2R 24647190 24647210 4 475 15.0 24.0 19.5 0.2 500 chr2R 24646710 intergenic not near genes chr2R 24646960 intergenic not near genes chr2R 24647210 intergenic not near genes chr2R_4_24645001 chr2R_24645001 RAL-804 707 chr2R 24647587 24647613 chr2R 24655144 24655167 412 9 7556 3.5 2.5 3.0 2.2 7580 chr2R 24647587 intergenic not near genes chr2R 24651377 intergenic not near genes chr2R 24655167 intergenic not near genes chr2R_9_24650001 chr2R_24650001 RAL-804 708 chr2R 24708688 24708716 chr2R 24708856 24708867 9 167 2.5 6.0 4.2 1.7 179 chr2R 24708688 intron Mid1 - chr2R 24708778 intron Mid1 - chr2R 24708867 intron Mid1 - chr2R_9_24705001 chr2R_24705001 RAL-804 709 chr2R 24727890 24727918 chr2R 24735392 24735425 mdg1 9 7506 0.0 2.5 1.2 4.1 7535 chr2R 24727890 intron Mid1 - chr2R 24731658 intron Mid1 - chr2R 24735425 intron Mid1 - chr2R_9_24730001 chr2R_24730001 RAL-804 710 chr2R 24763617 24763641 chr2R 24765592 24765613 G2 6 1974 3.5 3.5 3.5 1.3 1996 chr2R 24763617 exon CG3894 + chr2R 24764615 intron CG3894 + chr2R 24765613 exon CG3894 + chr2R_6_24760001 chr2R_24760001 RAL-804 711 chr2R 24859843 24859852 chr2R 24859927 24859938 6 85 6.5 3.0 4.8 1.0 95 chr2R 24859843 5` UTR CR44829 + chr2R 24859890 5` UTR CR44829 + chr2R 24859938 5` UTR CR44829 + chr2R_6_24855001 chr2R_24855001 RAL-804 712 chr2R 24859853 24859867 chr2R 24859926 24859951 6 83 3.0 3.0 3.0 1.5 98 chr2R 24859853 5` UTR CR44829 + chr2R 24859902 5` UTR CR44829 + chr2R 24859951 5` UTR CR44829 + chr2R_6_24855001 chr2R_24855001 RAL-804 713 chr2R 25014548 25014574 chr2R 25014619 25014650 9 74 1.5 2.5 2.0 3.0 102 chr2R 25014548 intron uzip + chr2R 25014599 intron uzip + chr2R 25014650 intron uzip + chr2R_9_25010001 chr2R_25010001 RAL-804 714 chr2R 25018340 25018376 chr2R 25018441 25018477 11 99 2.5 3.5 3.0 2.8 137 chr2R 25018340 intron uzip + chr2R 25018408 intron uzip + chr2R 25018477 intron uzip + chr2R_11_25015001 chr2R_25015001 RAL-804 715 chr2R 25022646 25022669 chr2R 25022730 25022753 6 84 1.0 1.0 1.0 3.0 107 chr2R 25022646 intron uzip + chr2R 25022700 intron uzip + chr2R 25022753 intron uzip + chr2R_6_25020001 chr2R_25020001 RAL-804 716 chr2R 25081617 25081639 chr2R 25082713 25082735 11 1095 2.0 4.5 3.2 2.6 1118 chr2R 25081617 intron gol - chr2R 25082176 intron gol - chr2R 25082735 intron gol - chr2R_11_25080001 chr2R_25080001 RAL-804 717 chr2R 25101274 25101306 chr2R 25101376 25101408 7 101 1.0 1.0 1.0 3.5 134 chr2R 25101274 intron lov - chr2R 25101341 intron lov - chr2R 25101408 intron lov - chr2R_7_25100001 chr2R_25100001 RAL-804 718 chr2R 25104777 25104805 chr2R 25104902 25104930 9 125 2.5 0.5 1.5 3.6 153 chr2R 25104777 intron lov - chr2R 25104854 intron lov - chr2R 25104930 intron lov - chr2R_9_25100001 chr2R_25100001 RAL-804 719 chr2R 25141653 25141682 chr2R 25159343 25159372 roo 6 17690 1.5 1.0 1.2 2.7 17719 chr2R 25141653 intergenic not near genes chr2R 25150512 intergenic not near genes chr2R 25159372 intergenic not near genes chr2R_6_25150001 chr2R_25150001 RAL-804 720 chr2R 25193342 25193345 chr2R 25193484 25193487 4 142 3.5 1.5 2.5 1.1 145 chr2R 25193342 intron CG9380 - chr2R 25193414 intron CG9380 - chr2R 25193487 intron CG9380 - chr2R_4_25190001 chr2R_25190001 RAL-804 721 chr2R 25234767 25234790 chr2R 25234847 25234870 7 80 1.0 1.5 1.2 3.2 103 chr2R 25234767 intron CG9380 - chr2R 25234818 intron CG9380 - chr2R 25234870 intron CG9380 - chr2R_7_25230001 chr2R_25230001 RAL-804 722 chr2R 25253442 25253475 chr2R 25253518 25253547 12 75 3.0 2.0 2.5 3.4 105 chr2R 25253442 intron,intron CG9380 -,CG30428 + chr2R 25253494 intron,intron CG9380 -,CG30428 + chr2R 25253547 intron,intron CG9380 -,CG30428 + chr2R_12_25250001 chr2R_25250001 RAL-804 723 chr3L 29591 29620 chr3L 29716 29752 8 130 4.5 1.0 2.8 2.1 161 chr3L 29591 intergenic not near genes chr3L 29672 intergenic not near genes chr3L 29752 intergenic not near genes chr3L_8_25001 chr3L_25001 RAL-804 724 chr3L 33179 33194 chr3L 33387 33405 5 210 3.0 1.5 2.2 1.6 226 chr3L 33179 intergenic not near genes chr3L 33292 intergenic not near genes chr3L 33405 intergenic not near genes chr3L_5_30001 chr3L_30001 RAL-804 725 chr3L 62975 63006 chr3L 63347 63372 8 371 2.0 2.0 2.0 2.7 397 chr3L 62975 intergenic not near genes chr3L 63174 intergenic not near genes chr3L 63372 intergenic not near genes chr3L_8_60001 chr3L_60001 RAL-804 726 chr3L 68993 69012 chr3L 69073 69099 6 85 2.0 5.5 3.8 1.2 106 chr3L 68993 3` UTR Lsp1gamma + chr3L 69046 intergenic Lsp1gamma +,CR44510 + chr3L 69099 intergenic CR44510 +,Lsp1gamma + chr3L_6_65001 chr3L_65001 RAL-804 727 chr3L 71928 71963 chr3L 72011 72045 17 83 3.5 2.0 2.8 4.5 117 chr3L 71928 intergenic CR43988 - chr3L 71986 intergenic CR43988 - chr3L 72045 intergenic CR43988 - chr3L_17_70001 chr3L_70001 RAL-804 728 chr3L 110224 110244 chr3L 119391 119411 roo 4 9167 1.0 3.0 2.0 1.3 9187 chr3L 110224 intergenic not near genes chr3L 114818 intergenic not near genes chr3L 119411 intergenic not near genes chr3L_4_110001 chr3L_110001 RAL-804 729 chr3L 390966 390978 chr3L 391068 391084 4 105 5.5 5.5 5.5 0.6 118 chr3L 390966 intron trh - chr3L 391025 intron trh - chr3L 391084 intron trh - chr3L_4_390001 chr3L_390001 RAL-804 730 chr3L 491640 491664 chr3L 491722 491746 7 82 2.5 0.5 1.5 2.8 106 chr3L 491640 intron klar - chr3L 491693 intron klar - chr3L 491746 intron klar - chr3L_7_490001 chr3L_490001 RAL-804 731 chr3L 514283 514291 chr3L 514360 514368 5 77 5.0 5.5 5.2 0.8 85 chr3L 514283 intron klar - chr3L 514326 intron klar - chr3L 514368 intron klar - chr3L_5_510001 chr3L_510001 RAL-804 732 chr3L 514292 514305 chr3L 514356 514382 6 75 1.5 4.5 3.0 1.5 90 chr3L 514292 intron klar - chr3L 514337 intron klar - chr3L 514382 intron klar - chr3L_6_510001 chr3L_510001 RAL-804 733 chr3L 524745 524777 chr3L 524828 524859 4 83 0.0 2.5 1.2 1.8 114 chr3L 524745 intron klar - chr3L 524802 intron klar - chr3L 524859 intron klar - chr3L_4_520001 chr3L_520001 RAL-804 734 chr3L 559524 559553 chr3L 559913 559922 8 386 2.5 2.5 2.5 2.3 398 chr3L 559524 intron hipk + chr3L 559723 intron hipk + chr3L 559922 intron hipk + chr3L_8_555001 chr3L_555001 RAL-804 735 chr3L 705903 705932 chr3L 705999 706028 9 96 2.5 2.5 2.5 2.6 125 chr3L 705903 intergenic CG13895 -,CR44514 + chr3L 705966 3` UTR CG13895 - chr3L 706028 3` UTR CG13895 - chr3L_9_705001 chr3L_705001 RAL-804 736 chr3L 822085 822095 chr3L 822165 822175 5 80 0.0 7.0 3.5 1.1 90 chr3L 822085 intergenic not near genes chr3L 822130 intergenic not near genes chr3L 822175 intergenic not near genes chr3L_5_820001 chr3L_820001 RAL-804 737 chr3L 832604 832635 chr3L 832691 832722 7 86 2.0 0.5 1.2 3.2 118 chr3L 832604 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832663 intron CG13900 - chr3L 832722 exon CG13900 - chr3L_7_830001 chr3L_830001 RAL-804 738 chr3L 867834 867852 chr3L 867917 867935 7 83 0.0 1.5 0.8 3.9 101 chr3L 867834 intron CG12502 + chr3L 867884 intron CG12502 + chr3L 867935 intron CG12502 + chr3L_7_865001 chr3L_865001 RAL-804 739 chr3L 925175 925210 chr3L 932601 932636 mdg1 12 7426 2.5 4.0 3.2 2.9 7461 chr3L 925175 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932636 intron Glut1 + chr3L_12_925001 chr3L_925001 RAL-804 740 chr3L 933875 933906 chr3L 934008 934037 5 133 0.0 2.0 1.0 2.5 162 chr3L 933875 intron Glut1 + chr3L 933956 intron Glut1 + chr3L 934037 intron Glut1 + chr3L_5_930001 chr3L_930001 RAL-804 741 chr3L 939777 939803 chr3L 940891 940918 jockey 12 1119 6.0 3.0 4.5 2.2 1141 chr3L 939777 intron Glut1 + chr3L 940348 intron Glut1 + chr3L 940918 intron Glut1 + chr3L_12_940001 chr3L_940001 RAL-804 742 chr3L 949891 949922 chr3L 949976 950007 9 85 2.5 2.0 2.2 2.8 116 chr3L 949891 intron Glut1 + chr3L 949949 intron Glut1 + chr3L 950007 intron Glut1 + chr3L_9_945001 chr3L_945001 RAL-804 743 chr3L 1031576 1031601 chr3L 1031652 1031677 5 75 7.5 3.5 5.5 0.8 101 chr3L 1031576 intron trio - chr3L 1031626 intron trio - chr3L 1031677 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-804 744 chr3L 1039298 1039335 chr3L 1039756 1039792 14 457 1.5 2.0 1.8 5.0 494 chr3L 1039298 intron bab1 - chr3L 1039545 intron bab1 - chr3L 1039792 intron bab1 - chr3L_14_1035001 chr3L_1035001 RAL-804 745 chr3L 1040548 1040571 chr3L 1040632 1040653 6 83 6.5 1.0 3.8 1.2 105 chr3L 1040548 intron bab1 - chr3L 1040600 intron bab1 - chr3L 1040653 intron bab1 - chr3L_6_1040001 chr3L_1040001 RAL-804 746 chr3L 1103991 1104000 chr3L 1104182 1104191 5 190 5.0 5.0 5.0 0.8 200 chr3L 1103991 intergenic not near genes chr3L 1104091 intergenic not near genes chr3L 1104191 intergenic not near genes chr3L_5_1100001 chr3L_1100001 RAL-804 747 chr3L 1219598 1219622 chr3L 1227331 1227354 412 5 7732 4.0 2.0 3.0 1.2 7756 chr3L 1219598 intron mwh + chr3L 1223476 intron mwh + chr3L 1227354 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-804 748 chr3L 1275094 1275127 chr3L 1275173 1275207 9 79 1.5 1.5 1.5 3.6 113 chr3L 1275094 intergenic not near genes chr3L 1275150 intergenic not near genes chr3L 1275207 intergenic not near genes chr3L_9_1275001 chr3L_1275001 RAL-804 749 chr3L 1310988 1311010 chr3L 1315852 1315870 9 4862 27.0 24.0 25.5 0.3 4882 chr3L 1310988 exon CG2469 + chr3L 1313429 intergenic CG9186 -,CG9153 + chr3L 1315870 exon CG9153 + chr3L_9_1310001 chr3L_1310001 RAL-804 750 chr3L 1347157 1347190 chr3L 1347242 1347267 8 81 2.0 5.0 3.5 1.8 110 chr3L 1347157 intron Ptp61F - chr3L 1347212 intron Ptp61F - chr3L 1347267 intron Ptp61F - chr3L_8_1345001 chr3L_1345001 RAL-804 751 chr3L 1415780 1415786 chr3L 1415861 1415868 4 81 4.5 2.5 3.5 0.9 88 chr3L 1415780 intron Ptp61F - chr3L 1415824 intron Ptp61F - chr3L 1415868 intron Ptp61F - chr3L_4_1415001 chr3L_1415001 RAL-804 752 chr3L 1415801 1415807 chr3L 1415859 1415885 7 66 2.5 2.0 2.2 2.2 84 chr3L 1415801 intron Ptp61F - chr3L 1415843 intron Ptp61F - chr3L 1415885 intron Ptp61F - chr3L_7_1415001 chr3L_1415001 RAL-804 753 chr3L 1505999 1506033 chr3L 1513596 1513623 17.6 17 7596 3.5 4.5 4.0 3.4 7624 chr3L 1505999 intron,intron Psa +,cue - chr3L 1509811 intron,intron Psa +,cue - chr3L 1513623 intron,intron Psa +,cue - chr3L_17_1505001 chr3L_1505001 RAL-804 754 chr3L 1805698 1805712 chr3L 1805872 1805886 4 174 3.5 1.5 2.5 1.1 188 chr3L 1805698 exon CG42676 + chr3L 1805792 intron CG42676 + chr3L 1805886 intron CG42676 + chr3L_4_1805001 chr3L_1805001 RAL-804 755 chr3L 1866811 1866826 chr3L 1866887 1866902 10 76 5.0 4.5 4.8 1.7 91 chr3L 1866811 intron CG12025 + chr3L 1866856 intron CG12025 + chr3L 1866902 intron CG12025 + chr3L_10_1865001 chr3L_1865001 RAL-804 756 chr3L 1994583 1994620 chr3L 1994664 1994701 14 81 1.0 1.0 1.0 7.0 118 chr3L 1994583 intergenic not near genes chr3L 1994642 intergenic not near genes chr3L 1994701 intergenic not near genes chr3L_14_1990001 chr3L_1990001 RAL-804 757 chr3L 2168775 2168808 chr3L 2168866 2168899 10 91 0.5 5.0 2.8 2.6 124 chr3L 2168775 exon CG15879 - chr3L 2168837 intron CG15879 - chr3L 2168899 intron CG15879 - chr3L_10_2165001 chr3L_2165001 RAL-804 758 chr3L 2310148 2310175 chr3L 2310891 2310918 6 743 3.5 2.5 3.0 1.5 770 chr3L 2310148 intergenic not near genes chr3L 2310533 intergenic not near genes chr3L 2310918 intergenic not near genes chr3L_6_2310001 chr3L_2310001 RAL-804 759 chr3L 2447504 2447531 chr3L 2456660 2456684 roo 5 9154 3.5 3.5 3.5 1.1 9180 chr3L 2447504 intron CG45186 + chr3L 2452094 intron CG45186 + chr3L 2456684 intron CG45186 + chr3L_5_2450001 chr3L_2450001 RAL-804 760 chr3L 2533651 2533680 chr3L 2533732 2533754 8 80 5.5 4.5 5.0 1.3 103 chr3L 2533651 intron Spn - chr3L 2533702 intron Spn - chr3L 2533754 intron Spn - chr3L_8_2530001 chr3L_2530001 RAL-804 761 chr3L 2534625 2534645 chr3L 2534708 2534728 9 82 0.0 4.0 2.0 3.0 103 chr3L 2534625 intron Spn - chr3L 2534676 intron Spn - chr3L 2534728 exon Spn - chr3L_9_2530001 chr3L_2530001 RAL-804 762 chr3L 2683943 2683971 chr3L 2684019 2684047 6 76 2.0 1.0 1.5 2.4 104 chr3L 2683943 intron Fife - chr3L 2683995 intron Fife - chr3L 2684047 intron Fife - chr3L_6_2680001 chr3L_2680001 RAL-804 763 chr3L 2911780 2911806 chr3L 2911869 2911899 8 91 1.5 2.5 2.0 2.7 119 chr3L 2911780 intron Shab + chr3L 2911840 intron Shab + chr3L 2911899 intron Shab + chr3L_8_2910001 chr3L_2910001 RAL-804 764 chr3L 2927837 2927867 chr3L 2936114 2936144 Tirant 8 8276 2.5 1.0 1.8 2.9 8307 chr3L 2927837 intron Shab + chr3L 2931990 intron Shab + chr3L 2936144 intron Shab + chr3L_8_2930001 chr3L_2930001 RAL-804 765 chr3L 2987730 2987755 chr3L 2987992 2988017 7 262 4.5 4.5 4.5 1.3 287 chr3L 2987730 intergenic not near genes chr3L 2987874 intergenic not near genes chr3L 2988017 intergenic not near genes chr3L_7_2985001 chr3L_2985001 RAL-804 766 chr3L 3061297 3061317 chr3L 3069869 3069900 Tirant 4 8568 2.5 5.0 3.8 0.8 8603 chr3L 3061297 intron CG32486 - chr3L 3065598 intron CG32486 - chr3L 3069900 intron CG32486 - chr3L_4_3065001 chr3L_3065001 RAL-804 767 chr3L 3259625 3259650 chr3L 3259715 3259745 10 93 2.0 5.5 3.8 2.1 120 chr3L 3259625 intron ckd + chr3L 3259685 intron ckd + chr3L 3259745 intron ckd + chr3L_10_3255001 chr3L_3255001 RAL-804 768 chr3L 3281439 3281472 chr3L 3281935 3281968 Doc 12 494 3.0 8.5 5.8 1.8 529 chr3L 3281439 intron CG12017 + chr3L 3281704 intron CG12017 + chr3L 3281968 intron CG12017 + chr3L_12_3280001 chr3L_3280001 RAL-804 769 chr3L 3436288 3436315 chr3L 3436367 3436394 7 79 0.5 1.5 1.0 3.5 106 chr3L 3436288 intron eIF5B - chr3L 3436341 intron eIF5B - chr3L 3436394 intron eIF5B - chr3L_7_3435001 chr3L_3435001 RAL-804 770 chr3L 3475076 3475112 chr3L 3475520 3475555 jockey 13 444 1.0 3.5 2.2 4.1 479 chr3L 3475076 intron CG42324 + chr3L 3475316 intron CG42324 + chr3L 3475555 intron CG42324 + chr3L_13_3475001 chr3L_3475001 RAL-804 771 chr3L 3541956 3541988 chr3L 3542036 3542063 13 75 3.0 1.0 2.0 4.3 107 chr3L 3541956 intron Eip63E + chr3L 3542010 intron Eip63E + chr3L 3542063 intron Eip63E + chr3L_13_3540001 chr3L_3540001 RAL-804 772 chr3L 3601296 3601331 chr3L 3606607 3606642 copia 12 5311 3.5 3.0 3.2 2.9 5346 chr3L 3601296 intron Eip63E + chr3L 3603969 intron Eip63E + chr3L 3606642 intron Eip63E + chr3L_12_3600001 chr3L_3600001 RAL-804 773 chr3L 3692318 3692341 chr3L 3692397 3692419 6 79 3.0 1.0 2.0 2.0 101 chr3L 3692318 intergenic not near genes chr3L 3692368 intergenic not near genes chr3L 3692419 intergenic not near genes chr3L_6_3690001 chr3L_3690001 RAL-804 774 chr3L 3773627 3773666 chr3L 3773706 3773747 5 80 0.0 0.0 0.0 5.0 120 chr3L 3773627 intron CG32264 - chr3L 3773687 intron CG32264 - chr3L 3773747 intron CG32264 - chr3L_5_3770001 chr3L_3770001 RAL-804 775 chr3L 3798040 3798069 chr3L 3798120 3798149 6 78 2.0 3.0 2.5 1.7 109 chr3L 3798040 intron CG32264 - chr3L 3798094 intron CG32264 - chr3L 3798149 intron CG32264 - chr3L_6_3795001 chr3L_3795001 RAL-804 776 chr3L 3815051 3815083 chr3L 3815132 3815164 7 80 5.5 3.0 4.2 1.3 113 chr3L 3815051 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815108 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815164 intron,intron Scsalpha +,CR43932 - chr3L_7_3815001 chr3L_3815001 RAL-804 777 chr3L 3977444 3977475 chr3L 3977523 3977548 8 79 2.0 2.0 2.0 2.7 104 chr3L 3977444 intergenic not near genes chr3L 3977496 intergenic not near genes chr3L 3977548 intergenic not near genes chr3L_8_3975001 chr3L_3975001 RAL-804 778 chr3L 4097004 4097029 chr3L 4097089 4097114 14 84 2.5 0.0 1.2 6.4 110 chr3L 4097004 intron CG14995 - chr3L 4097059 intron CG14995 - chr3L 4097114 intron CG14995 - chr3L_14_4095001 chr3L_4095001 RAL-804 779 chr3L 4146815 4146835 chr3L 4146897 4146917 4 82 0.0 1.5 0.8 2.2 102 chr3L 4146815 intergenic not near genes chr3L 4146866 intergenic not near genes chr3L 4146917 intergenic not near genes chr3L_4_4145001 chr3L_4145001 RAL-804 780 chr3L 4170153 4170166 chr3L 4170231 4170244 4 78 0.0 0.0 0.0 4.0 91 chr3L 4170153 intergenic Ero1L + chr3L 4170198 intergenic Ero1L + chr3L 4170244 intergenic Ero1L + chr3L_4_4170001 chr3L_4170001 RAL-804 781 chr3L 4187325 4187359 chr3L 4187488 4187522 5 163 4.0 3.5 3.8 1.0 197 chr3L 4187325 intron,intron CG18675 +,Teh2 - chr3L 4187424 intron,intron CG18675 +,Teh2 - chr3L 4187522 intron,intron CG18675 +,Teh2 - chr3L_5_4185001 chr3L_4185001 RAL-804 782 chr3L 4303635 4303647 chr3L 4303728 4303740 6 93 2.0 1.0 1.5 2.4 105 chr3L 4303635 intron dyl - chr3L 4303688 intron dyl - chr3L 4303740 intron dyl - chr3L_6_4300001 chr3L_4300001 RAL-804 783 chr3L 4519420 4519453 chr3L 4519496 4519530 14 77 4.5 4.0 4.2 2.7 110 chr3L 4519420 intron Tie - chr3L 4519475 intron Tie - chr3L 4519530 intron Tie - chr3L_14_4515001 chr3L_4515001 RAL-804 784 chr3L 4613569 4613597 chr3L 4613716 4613723 11 145 3.5 3.0 3.2 2.6 154 chr3L 4613569 intron Src64B - chr3L 4613646 intron Src64B - chr3L 4613723 intron Src64B - chr3L_11_4610001 chr3L_4610001 RAL-804 785 chr3L 4632302 4632328 chr3L 4632384 4632410 8 81 0.5 2.0 1.2 3.6 108 chr3L 4632302 intron axo - chr3L 4632356 intron axo - chr3L 4632410 intron axo - chr3L_8_4630001 chr3L_4630001 RAL-804 786 chr3L 4652571 4652592 chr3L 4652654 4652675 9 83 6.0 2.5 4.2 1.7 104 chr3L 4652571 intron axo - chr3L 4652623 intron axo - chr3L 4652675 intron axo - chr3L_9_4650001 chr3L_4650001 RAL-804 787 chr3L 4706089 4706104 chr3L 4706579 4706581 4 486 3.5 0.5 2.0 1.3 492 chr3L 4706089 intron RhoGEF64C + chr3L 4706335 intron RhoGEF64C + chr3L 4706581 intron RhoGEF64C + chr3L_4_4705001 chr3L_4705001 RAL-804 788 chr3L 4725329 4725356 chr3L 4725417 4725444 8 88 0.0 0.5 0.2 6.7 115 chr3L 4725329 intron RhoGEF64C + chr3L 4725386 intron RhoGEF64C + chr3L 4725444 intron RhoGEF64C + chr3L_8_4725001 chr3L_4725001 RAL-804 789 chr3L 4858311 4858337 chr3L 4858391 4858427 8 86 3.5 3.5 3.5 1.8 116 chr3L 4858311 intergenic not near genes chr3L 4858369 intergenic not near genes chr3L 4858427 intergenic not near genes chr3L_8_4855001 chr3L_4855001 RAL-804 790 chr3L 4901130 4901156 chr3L 4907320 4907346 diver 7 6190 0.5 2.5 1.5 2.8 6216 chr3L 4901130 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907346 intergenic not near genes chr3L_7_4900001 chr3L_4900001 RAL-804 791 chr3L 4990747 4990769 chr3L 4990860 4990881 8 112 4.0 3.5 3.8 1.7 134 chr3L 4990747 intron Con - chr3L 4990814 intron Con - chr3L 4990881 intron Con - chr3L_8_4990001 chr3L_4990001 RAL-804 792 chr3L 4990771 4990778 chr3L 4990859 4990891 4 104 2.5 3.5 3.0 1.0 120 chr3L 4990771 intron Con - chr3L 4990831 intron Con - chr3L 4990891 intron Con - chr3L_4_4990001 chr3L_4990001 RAL-804 793 chr3L 5034169 5034187 chr3L 5043320 5043334 roo 5 9151 3.5 1.0 2.2 1.6 9165 chr3L 5034169 intron Con - chr3L 5038752 intron Con - chr3L 5043334 intron Con - chr3L_5_5035001 chr3L_5035001 RAL-804 794 chr3L 5076838 5076871 chr3L 5076928 5076961 7 90 1.0 2.0 1.5 2.8 123 chr3L 5076838 intron Con - chr3L 5076900 intron Con - chr3L 5076961 intron Con - chr3L_7_5075001 chr3L_5075001 RAL-804 795 chr3L 5212240 5212268 chr3L 5212320 5212328 8 77 2.5 1.0 1.8 2.9 88 chr3L 5212240 intron shep - chr3L 5212284 intron shep - chr3L 5212328 intron shep - chr3L_8_5210001 chr3L_5210001 RAL-804 796 chr3L 5353302 5353329 chr3L 5353916 5353943 8 614 3.5 2.0 2.8 2.1 641 chr3L 5353302 intron lama - chr3L 5353622 intron lama - chr3L 5353943 intron lama - chr3L_8_5350001 chr3L_5350001 RAL-804 797 chr3L 5388200 5388233 chr3L 5388524 5388556 11 322 2.5 2.0 2.2 3.4 356 chr3L 5388200 intergenic not near genes chr3L 5388378 intergenic not near genes chr3L 5388556 intergenic not near genes chr3L_11_5385001 chr3L_5385001 RAL-804 798 chr3L 5476182 5476210 chr3L 5476262 5476290 10 80 5.0 5.5 5.2 1.6 108 chr3L 5476182 intergenic not near genes chr3L 5476236 intergenic not near genes chr3L 5476290 intergenic not near genes chr3L_10_5475001 chr3L_5475001 RAL-804 799 chr3L 5504559 5504565 chr3L 5504637 5504642 4 78 3.5 0.0 1.8 1.4 83 chr3L 5504559 intron CG34342 - chr3L 5504600 intron CG34342 - chr3L 5504642 intron CG34342 - chr3L_4_5500001 chr3L_5500001 RAL-804 800 chr3L 5516423 5516442 chr3L 5516518 5516537 4 95 3.0 5.0 4.0 0.8 114 chr3L 5516423 intron Lkr - chr3L 5516480 intron Lkr - chr3L 5516537 intron Lkr - chr3L_4_5515001 chr3L_5515001 RAL-804 801 chr3L 5926317 5926341 chr3L 5926506 5926531 BS 6 188 6.5 4.0 5.2 1.0 214 chr3L 5926317 intron Vap-33B + chr3L 5926424 intron Vap-33B + chr3L 5926531 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-804 802 chr3L 6022246 6022272 chr3L 6022329 6022356 10 82 3.0 3.5 3.2 2.4 110 chr3L 6022246 intron PVRAP + chr3L 6022301 intron PVRAP + chr3L 6022356 intron PVRAP + chr3L_10_6020001 chr3L_6020001 RAL-804 803 chr3L 6040369 6040388 chr3L 6042721 6042744 Doc 4 2355 0.0 1.5 0.8 2.2 2375 chr3L 6040369 intergenic Jon65Aiv + chr3L 6041556 intergenic not near genes chr3L 6042744 intergenic not near genes chr3L_4_6040001 chr3L_6040001 RAL-804 804 chr3L 6086280 6086296 chr3L 6086570 6086581 5 289 3.0 5.0 4.0 1.0 301 chr3L 6086280 intron CG13293 + chr3L 6086430 intron CG13293 + chr3L 6086581 intron CG13293 + chr3L_5_6085001 chr3L_6085001 RAL-804 805 chr3L 6220916 6220944 chr3L 6230066 6230096 roo 8 9152 5.0 4.0 4.5 1.5 9180 chr3L 6220916 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230096 intergenic not near genes chr3L_8_6225001 chr3L_6225001 RAL-804 806 chr3L 6267321 6267349 chr3L 6267409 6267437 4 88 4.0 2.5 3.2 1.0 116 chr3L 6267321 intergenic not near genes chr3L 6267379 intergenic not near genes chr3L 6267437 intergenic not near genes chr3L_4_6265001 chr3L_6265001 RAL-804 807 chr3L 6442148 6442178 chr3L 6442367 6442392 7 216 16.5 23.5 20.0 0.3 244 chr3L 6442148 intron CG42747 + chr3L 6442270 intron CG42747 + chr3L 6442392 intron CG42747 + chr3L_7_6440001 chr3L_6440001 RAL-804 808 chr3L 6659324 6659353 chr3L 6659401 6659429 8 77 1.5 1.0 1.2 3.6 105 chr3L 6659324 intergenic not near genes chr3L 6659376 intergenic not near genes chr3L 6659429 intergenic not near genes chr3L_8_6655001 chr3L_6655001 RAL-804 809 chr3L 6668965 6668988 chr3L 6669046 6669066 7 80 2.5 0.0 1.2 3.2 101 chr3L 6668965 intergenic not near genes chr3L 6669016 intergenic not near genes chr3L 6669066 intergenic not near genes chr3L_7_6665001 chr3L_6665001 RAL-804 810 chr3L 6855932 6855950 chr3L 6860716 6860734 Doc 5 4784 2.0 3.5 2.8 1.3 4802 chr3L 6855932 intergenic not near genes chr3L 6858333 intergenic not near genes chr3L 6860734 intergenic not near genes chr3L_5_6855001 chr3L_6855001 RAL-804 811 chr3L 6887523 6887550 chr3L 6895014 6895042 roo 12 7492 3.0 1.5 2.2 3.8 7519 chr3L 6887523 intergenic not near genes chr3L 6891282 intergenic not near genes chr3L 6895042 intergenic not near genes chr3L_12_6890001 chr3L_6890001 RAL-804 812 chr3L 6974505 6974520 chr3L 6974606 6974621 5 101 0.0 6.0 3.0 1.2 116 chr3L 6974505 intron Galphai - chr3L 6974563 intron Galphai - chr3L 6974621 intron Galphai - chr3L_5_6970001 chr3L_6970001 RAL-804 813 chr3L 6990721 6990736 chr3L 6990800 6990812 6 78 5.5 2.0 3.8 1.2 91 chr3L 6990721 5` UTR bin + chr3L 6990766 5` UTR bin + chr3L 6990812 5` UTR bin + chr3L_6_6990001 chr3L_6990001 RAL-804 814 chr3L 7002355 7002377 chr3L 7002459 7002481 8 104 6.5 2.0 4.2 1.5 126 chr3L 7002355 intron Mp + chr3L 7002418 intron Mp + chr3L 7002481 intron Mp + chr3L_8_7000001 chr3L_7000001 RAL-804 815 chr3L 7079604 7079632 chr3L 7079681 7079709 7 77 2.5 1.5 2.0 2.3 105 chr3L 7079604 intergenic not near genes chr3L 7079656 intergenic not near genes chr3L 7079709 intergenic not near genes chr3L_7_7075001 chr3L_7075001 RAL-804 816 chr3L 7090027 7090058 chr3L 7090108 7090139 10 81 1.5 2.0 1.8 3.6 112 chr3L 7090027 intergenic not near genes chr3L 7090083 intergenic not near genes chr3L 7090139 intergenic not near genes chr3L_10_7090001 chr3L_7090001 RAL-804 817 chr3L 7308191 7308219 chr3L 7308267 7308294 7 76 2.0 3.5 2.8 1.8 103 chr3L 7308191 intron unc-13-4A - chr3L 7308242 intron unc-13-4A - chr3L 7308294 intron unc-13-4A - chr3L_7_7305001 chr3L_7305001 RAL-804 818 chr3L 7311594 7311615 chr3L 7311684 7311706 8 91 3.0 2.0 2.5 2.3 112 chr3L 7311594 intron unc-13-4A - chr3L 7311650 intron unc-13-4A - chr3L 7311706 intron unc-13-4A - chr3L_8_7310001 chr3L_7310001 RAL-804 819 chr3L 7436125 7436134 chr3L 7436205 7436215 4 80 7.0 1.5 4.2 0.8 90 chr3L 7436125 intron CG42458 + chr3L 7436170 intron CG42458 + chr3L 7436215 intron CG42458 + chr3L_4_7435001 chr3L_7435001 RAL-804 820 chr3L 7436139 7436149 chr3L 7436199 7436215 7 72 3.0 1.5 2.2 2.2 76 chr3L 7436139 intron CG42458 + chr3L 7436177 intron CG42458 + chr3L 7436215 intron CG42458 + chr3L_7_7435001 chr3L_7435001 RAL-804 821 chr3L 7498757 7498791 chr3L 7503534 7503568 F-element 4 4777 2.5 1.5 2.0 1.3 4811 chr3L 7498757 5` UTR CG8539 - chr3L 7501162 intergenic not near genes chr3L 7503568 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-804 822 chr3L 7505788 7505799 chr3L 7505847 7505871 5 77 12.0 13.0 12.5 0.4 83 chr3L 7505788 exon CG7548 - chr3L 7505830 exon CG7548 - chr3L 7505871 exon CG7548 - chr3L_5_7505001 chr3L_7505001 RAL-804 823 chr3L 7581621 7581656 chr3L 7581705 7581738 12 82 0.5 3.0 1.8 4.3 117 chr3L 7581621 intergenic not near genes chr3L 7581680 intergenic not near genes chr3L 7581738 intergenic not near genes chr3L_12_7580001 chr3L_7580001 RAL-804 824 chr3L 7591162 7591181 chr3L 7591244 7591247 4 76 1.5 5.5 3.5 0.9 85 chr3L 7591162 intergenic CG7716 - chr3L 7591204 intergenic CG7716 - chr3L 7591247 intergenic CG7716 - chr3L_4_7590001 chr3L_7590001 RAL-804 825 chr3L 7727152 7727174 chr3L 7727233 7727255 4 81 0.5 0.5 0.5 2.7 103 chr3L 7727152 intron CG32373 + chr3L 7727204 intron CG32373 + chr3L 7727255 intron CG32373 + chr3L_4_7725001 chr3L_7725001 RAL-804 826 chr3L 7793711 7793745 chr3L 7800763 7800797 297 6 7052 2.5 2.5 2.5 1.7 7086 chr3L 7793711 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800797 intron CG32369 - chr3L_6_7795001 chr3L_7795001 RAL-804 827 chr3L 7886512 7886547 chr3L 7889030 7889065 Stalker4 8 2518 3.5 1.0 2.2 2.5 2553 chr3L 7886512 intron CG32365 + chr3L 7887788 intron CG32365 + chr3L 7889065 intron CG32365 + chr3L_8_7885001 chr3L_7885001 RAL-804 828 chr3L 7985381 7985396 chr3L 7987709 7987723 NOF 4 2328 1.5 3.5 2.5 1.1 2342 chr3L 7985381 intron nmo + chr3L 7986552 intron nmo + chr3L 7987723 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-804 829 chr3L 7997617 7997623 chr3L 7997698 7997704 4 81 1.5 1.5 1.5 1.6 87 chr3L 7997617 intron nmo + chr3L 7997660 intron nmo + chr3L 7997704 intron nmo + chr3L_4_7995001 chr3L_7995001 RAL-804 830 chr3L 8004937 8004957 chr3L 8005130 8005151 9 194 1.5 9.5 5.5 1.4 214 chr3L 8004937 intron nmo + chr3L 8005044 intron nmo + chr3L 8005151 intron nmo + chr3L_9_8005001 chr3L_8005001 RAL-804 831 chr3L 8019702 8019736 chr3L 8024113 8024152 NOF 5 4412 0.0 1.5 0.8 2.8 4450 chr3L 8019702 intron nmo + chr3L 8021927 intron nmo + chr3L 8024152 intron nmo + chr3L_5_8020001 chr3L_8020001 RAL-804 832 chr3L 8178521 8178532 chr3L 8178597 8178609 5 77 0.0 0.0 0.0 5.0 88 chr3L 8178521 intergenic Nmt -,mthl7 - chr3L 8178565 intergenic mthl7 -,Nmt - chr3L 8178609 intergenic mthl7 -,Nmt - chr3L_5_8175001 chr3L_8175001 RAL-804 833 chr3L 8208135 8208152 chr3L 8208263 8208284 8 131 3.5 1.5 2.5 2.3 149 chr3L 8208135 intergenic not near genes chr3L 8208210 intergenic not near genes chr3L 8208284 intergenic not near genes chr3L_8_8205001 chr3L_8205001 RAL-804 834 chr3L 8214735 8214755 chr3L 8214820 8214820 5 81 0.5 6.0 3.2 1.2 85 chr3L 8214735 intergenic not near genes chr3L 8214778 intergenic not near genes chr3L 8214820 intergenic CG8012 + chr3L_5_8210001 chr3L_8210001 RAL-804 835 chr3L 8243448 8243482 chr3L 8243535 8243552 10 84 2.0 4.0 3.0 2.5 104 chr3L 8243448 intron Dscam4 + chr3L 8243500 intron Dscam4 + chr3L 8243552 intron Dscam4 + chr3L_10_8240001 chr3L_8240001 RAL-804 836 chr3L 8243816 8243850 chr3L 8243899 8243933 12 83 1.5 1.5 1.5 4.8 117 chr3L 8243816 intron Dscam4 + chr3L 8243874 intron Dscam4 + chr3L 8243933 intron Dscam4 + chr3L_12_8240001 chr3L_8240001 RAL-804 837 chr3L 8295794 8295822 chr3L 8295952 8295980 5 158 2.5 3.0 2.8 1.3 186 chr3L 8295794 intergenic CG7201 - chr3L 8295887 intergenic not near genes chr3L 8295980 intergenic not near genes chr3L_5_8295001 chr3L_8295001 RAL-804 838 chr3L 8319441 8319473 chr3L 8319517 8319549 12 72 2.0 6.0 4.0 2.4 108 chr3L 8319441 intergenic CG43059 - chr3L 8319495 intergenic not near genes chr3L 8319549 intergenic not near genes chr3L_12_8315001 chr3L_8315001 RAL-804 839 chr3L 8498301 8498328 chr3L 8505767 8505795 blood 4 7466 2.5 2.5 2.5 1.1 7494 chr3L 8498301 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505795 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-804 840 chr3L 8824568 8824604 chr3L 8824656 8824692 9 87 2.5 3.5 3.0 2.2 124 chr3L 8824568 intergenic not near genes chr3L 8824630 intergenic not near genes chr3L 8824692 intergenic not near genes chr3L_9_8820001 chr3L_8820001 RAL-804 841 chr3L 8831790 8831821 chr3L 8831871 8831902 5 81 0.5 1.0 0.8 2.8 112 chr3L 8831790 intron dally + chr3L 8831846 intron dally + chr3L 8831902 intron dally + chr3L_5_8830001 chr3L_8830001 RAL-804 842 chr3L 8839727 8839748 chr3L 8839807 8839827 4 80 0.5 2.0 1.2 1.8 100 chr3L 8839727 intron dally + chr3L 8839777 intron dally + chr3L 8839827 intron dally + chr3L_4_8835001 chr3L_8835001 RAL-804 843 chr3L 8861536 8861552 chr3L 8861627 8861643 4 91 0.0 2.0 1.0 2.0 107 chr3L 8861536 intron dally + chr3L 8861590 intron dally + chr3L 8861643 intron dally + chr3L_4_8860001 chr3L_8860001 RAL-804 844 chr3L 8928270 8928280 chr3L 8928346 8928356 4 76 2.5 0.5 1.5 1.6 86 chr3L 8928270 intron Tsp66E + chr3L 8928313 intron Tsp66E + chr3L 8928356 intron Tsp66E + chr3L_4_8925001 chr3L_8925001 RAL-804 845 chr3L 8949405 8949501 chr3L 8949500 8949582 4 88 0.0 0.0 0.0 4.0 177 chr3L 8949405 intron,intron CG43783 -,orb2 - chr3L 8949494 intron,intron CG43783 -,orb2 - chr3L 8949582 intron,intron CG43783 -,orb2 - chr3L_4_8945001 chr3L_8945001 RAL-804 846 chr3L 9003947 9003977 chr3L 9004031 9004062 11 84 3.0 2.5 2.8 2.9 115 chr3L 9003947 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004062 intergenic not near genes chr3L_11_9000001 chr3L_9000001 RAL-804 847 chr3L 9009769 9009787 chr3L 9010088 9010106 5 319 18.0 4.0 11.0 0.4 337 chr3L 9009769 5` UTR CG5194 - chr3L 9009938 intergenic CG5194 - chr3L 9010106 intergenic CG5194 - chr3L_5_9005001 chr3L_9005001 RAL-804 848 chr3L 9013691 9013692 chr3L 18417066 18417066 8 9403375 20.5 15.5 18.0 0.4 9403375 chr3L 9013691 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_8_13715001 chr3L_13715001 RAL-804 849 chr3L 9076926 9076954 chr3L 9084486 9084511 412 15 7559 5.0 4.5 4.8 2.6 7585 chr3L 9076926 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084511 exon Tequila + chr3L_15_9080001 chr3L_9080001 RAL-804 850 chr3L 9111158 9111182 chr3L 9111234 9111258 4 76 0.5 2.0 1.2 1.8 100 chr3L 9111158 intron bol - chr3L 9111208 intron bol - chr3L 9111258 intron bol - chr3L_4_9110001 chr3L_9110001 RAL-804 851 chr3L 9115245 9115269 chr3L 9115328 9115352 9 83 0.5 2.0 1.2 4.1 107 chr3L 9115245 intron bol - chr3L 9115298 intron bol - chr3L 9115352 intron bol - chr3L_9_9115001 chr3L_9115001 RAL-804 852 chr3L 9130557 9130581 chr3L 9134318 9134338 412 6 3760 3.5 3.5 3.5 1.3 3781 chr3L 9130557 intergenic bol - chr3L 9132448 intergenic not near genes chr3L 9134338 intergenic Dhpr + chr3L_6_9130001 chr3L_9130001 RAL-804 853 chr3L 9164699 9164722 chr3L 9166166 9166188 hobo 4 1467 2.0 2.0 2.0 1.3 1489 chr3L 9164699 intron Rdl - chr3L 9165444 intron Rdl - chr3L 9166188 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-804 854 chr3L 9193154 9193165 chr3L 9193236 9193249 5 83 1.0 3.0 2.0 1.7 95 chr3L 9193154 intergenic not near genes chr3L 9193202 intergenic not near genes chr3L 9193249 intergenic not near genes chr3L_5_9190001 chr3L_9190001 RAL-804 855 chr3L 9219258 9219280 chr3L 9219917 9219926 jockey 9 663 4.5 8.0 6.2 1.2 668 chr3L 9219258 intergenic not near genes chr3L 9219592 intergenic not near genes chr3L 9219926 intergenic not near genes chr3L_9_9215001 chr3L_9215001 RAL-804 856 chr3L 9270632 9270651 chr3L 9278387 9278400 roo 5 7753 3.0 4.5 3.8 1.0 7768 chr3L 9270632 intron GluRIB + chr3L 9274516 intron GluRIB + chr3L 9278400 exon GluRIB + chr3L_5_9270001 chr3L_9270001 RAL-804 857 chr3L 9390850 9390868 chr3L 9390980 9390998 4 130 1.5 1.5 1.5 1.6 148 chr3L 9390850 intron CG4080 - chr3L 9390924 intron CG4080 - chr3L 9390998 intron CG4080 - chr3L_4_9390001 chr3L_9390001 RAL-804 858 chr3L 9419897 9419926 chr3L 9419975 9419981 5 72 2.5 1.5 2.0 1.7 84 chr3L 9419897 intron CG3967 - chr3L 9419939 intron CG3967 - chr3L 9419981 intron CG3967 - chr3L_5_9415001 chr3L_9415001 RAL-804 859 chr3L 9443512 9443532 chr3L 9445299 9445319 S-element 4 1787 2.5 2.5 2.5 1.1 1807 chr3L 9443512 intron CG33926 + chr3L 9444416 intron CG33926 + chr3L 9445319 intron CG33926 + chr3L_4_9440001 chr3L_9440001 RAL-804 860 chr3L 9501708 9501734 chr3L 9502193 9502220 roo 9 486 0.5 3.5 2.0 3.0 512 chr3L 9501708 intron path - chr3L 9501964 intron path - chr3L 9502220 intron path - chr3L_9_9500001 chr3L_9500001 RAL-804 861 chr3L 9502616 9502644 chr3L 9502696 9502724 5 80 1.0 1.5 1.2 2.3 108 chr3L 9502616 intron path - chr3L 9502670 intron path - chr3L 9502724 intron path - chr3L_5_9500001 chr3L_9500001 RAL-804 862 chr3L 9510914 9510957 chr3L 9511007 9511036 4 82 0.0 1.5 0.8 2.2 122 chr3L 9510914 intron RpS9 - chr3L 9510975 intron RpS9 - chr3L 9511036 intron RpS9 - chr3L_4_9510001 chr3L_9510001 RAL-804 863 chr3L 9524030 9524067 chr3L 9524110 9524147 15 77 4.0 3.5 3.8 3.1 117 chr3L 9524030 intron CG33700 - chr3L 9524088 intron CG33700 - chr3L 9524147 intron CG33700 - chr3L_15_9520001 chr3L_9520001 RAL-804 864 chr3L 9533759 9533779 chr3L 9541316 9541339 412 6 7559 2.5 9.5 6.0 0.9 7580 chr3L 9533759 intergenic not near genes chr3L 9537549 intergenic not near genes chr3L 9541339 intergenic not near genes chr3L_6_9535001 chr3L_9535001 RAL-804 865 chr3L 9571909 9571937 chr3L 9572256 9572285 jockey 7 348 1.5 2.0 1.8 2.5 376 chr3L 9571909 intron CG42673 + chr3L 9572097 intron CG42673 + chr3L 9572285 intron CG42673 + chr3L_7_9570001 chr3L_9570001 RAL-804 866 chr3L 9575904 9575943 chr3L 9580984 9581023 jockey 9 5080 5.0 4.0 4.5 1.6 5119 chr3L 9575904 intron CG42673 + chr3L 9578464 intron CG42673 + chr3L 9581023 intron CG42673 + chr3L_9_9575001 chr3L_9575001 RAL-804 867 chr3L 9775382 9775397 chr3L 9775742 9775756 4 360 0.0 5.5 2.8 1.1 374 chr3L 9775382 intron CG8177 + chr3L 9775569 intron CG8177 + chr3L 9775756 intron CG8177 + chr3L_4_9775001 chr3L_9775001 RAL-804 868 chr3L 9918894 9918910 chr3L 9918989 9919005 5 95 4.0 5.5 4.8 0.9 111 chr3L 9918894 intron CG34356 + chr3L 9918950 intron CG34356 + chr3L 9919005 intron CG34356 + chr3L_5_9915001 chr3L_9915001 RAL-804 869 chr3L 9929676 9929683 chr3L 9938456 9938461 roo 7 8779 5.5 6.5 6.0 1.0 8785 chr3L 9929676 intron CG34356 + chr3L 9934068 intron CG34356 + chr3L 9938461 intron CG34356 + chr3L_7_9930001 chr3L_9930001 RAL-804 870 chr3L 9929687 9929701 chr3L 9938452 9938481 roo 5 8776 4.0 5.5 4.8 0.9 8794 chr3L 9929687 intron CG34356 + chr3L 9934084 intron CG34356 + chr3L 9938481 intron CG34356 + chr3L_5_9930001 chr3L_9930001 RAL-804 871 chr3L 9951195 9951232 chr3L 9951281 9951319 9 86 0.5 3.5 2.0 3.0 124 chr3L 9951195 intron CG34356 + chr3L 9951257 intron CG34356 + chr3L 9951319 intron CG34356 + chr3L_9_9950001 chr3L_9950001 RAL-804 872 chr3L 10003155 10003181 chr3L 10003252 10003278 7 97 2.0 3.5 2.8 1.8 123 chr3L 10003155 intron dpr6 + chr3L 10003216 intron dpr6 + chr3L 10003278 intron dpr6 + chr3L_7_10000001 chr3L_10000001 RAL-804 873 chr3L 10214732 10214828 chr3L 10214819 10214930 10 92 0.0 0.0 0.0 10.0 198 chr3L 10214732 intergenic not near genes chr3L 10214831 intergenic not near genes chr3L 10214930 intergenic not near genes chr3L_10_10210001 chr3L_10210001 RAL-804 874 chr3L 10248966 10249135 chr3L 10249044 10249212 18 77 0.0 0.0 0.0 18.0 246 chr3L 10248966 intergenic CR44540 - chr3L 10249089 intergenic not near genes chr3L 10249212 intergenic not near genes chr3L_18_10245001 chr3L_10245001 RAL-804 875 chr3L 10308752 10308771 chr3L 10308829 10308848 6 76 5.0 7.5 6.2 0.8 96 chr3L 10308752 intergenic not near genes chr3L 10308800 intergenic not near genes chr3L 10308848 intergenic not near genes chr3L_6_10305001 chr3L_10305001 RAL-804 876 chr3L 10314123 10314158 chr3L 10314209 10314244 9 85 1.0 3.0 2.0 3.0 121 chr3L 10314123 intergenic not near genes chr3L 10314184 intergenic not near genes chr3L 10314244 intergenic not near genes chr3L_9_10310001 chr3L_10310001 RAL-804 877 chr3L 10314486 10314504 chr3L 10314566 10314584 4 80 2.0 1.0 1.5 1.6 98 chr3L 10314486 intergenic not near genes chr3L 10314535 intergenic not near genes chr3L 10314584 intergenic not near genes chr3L_4_10310001 chr3L_10310001 RAL-804 878 chr3L 10378948 10378976 chr3L 10380419 10380448 12 1472 15.0 34.5 24.8 0.5 1500 chr3L 10378948 intergenic not near genes chr3L 10379698 intergenic not near genes chr3L 10380448 intergenic not near genes chr3L_12_10375001 chr3L_10375001 RAL-804 879 chr3L 10414940 10414977 chr3L 10417312 10417348 Doc 12 2372 0.0 0.5 0.2 10.0 2408 chr3L 10414940 intergenic CG12362 + chr3L 10416144 intergenic not near genes chr3L 10417348 intergenic not near genes chr3L_12_10415001 chr3L_10415001 RAL-804 880 chr3L 10420484 10420490 chr3L 10420616 10420622 4 132 2.0 0.0 1.0 2.0 138 chr3L 10420484 intergenic not near genes chr3L 10420553 intergenic not near genes chr3L 10420622 intergenic not near genes chr3L_4_10420001 chr3L_10420001 RAL-804 881 chr3L 10503411 10503438 chr3L 10503530 10503557 11 119 3.5 2.5 3.0 2.8 146 chr3L 10503411 intron A2bp1 + chr3L 10503484 intron A2bp1 + chr3L 10503557 intron A2bp1 + chr3L_11_10500001 chr3L_10500001 RAL-804 882 chr3L 10621845 10621872 chr3L 10621932 10621955 5 86 0.5 1.5 1.0 2.5 110 chr3L 10621845 intergenic not near genes chr3L 10621900 intergenic not near genes chr3L 10621955 intergenic not near genes chr3L_5_10620001 chr3L_10620001 RAL-804 883 chr3L 10658094 10658203 chr3L 10658171 10658330 15 103 0.0 0.0 0.0 15.0 236 chr3L 10658094 intron CG32066 - chr3L 10658212 intron CG32066 - chr3L 10658330 intron CG32066 - chr3L_15_10655001 chr3L_10655001 RAL-804 884 chr3L 10820501 10820522 chr3L 10820660 10820676 5 158 0.5 1.5 1.0 2.5 175 chr3L 10820501 intergenic not near genes chr3L 10820588 intergenic not near genes chr3L 10820676 intergenic not near genes chr3L_5_10820001 chr3L_10820001 RAL-804 885 chr3L 10956450 10956468 chr3L 10956568 10956586 5 118 1.5 2.0 1.8 1.8 136 chr3L 10956450 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956586 intergenic not near genes chr3L_5_10955001 chr3L_10955001 RAL-804 886 chr3L 10958224 10958240 chr3L 10958305 10958319 6 81 0.5 0.5 0.5 4.0 95 chr3L 10958224 intergenic not near genes chr3L 10958272 intergenic not near genes chr3L 10958319 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-804 887 chr3L 11055336 11055361 chr3L 11055683 11055706 7 345 0.0 2.5 1.2 3.2 370 chr3L 11055336 intron CG7888 + chr3L 11055521 intron CG7888 + chr3L 11055706 intron CG7888 + chr3L_7_11055001 chr3L_11055001 RAL-804 888 chr3L 11083512 11083539 chr3L 11083610 11083637 5 98 2.0 1.0 1.5 2.0 125 chr3L 11083512 intron JIL-1 - chr3L 11083574 intron JIL-1 - chr3L 11083637 intron JIL-1 - chr3L_5_11080001 chr3L_11080001 RAL-804 889 chr3L 11087065 11087088 chr3L 11088854 11088877 S-element 8 1789 2.0 2.5 2.2 2.5 1812 chr3L 11087065 intron JIL-1 - chr3L 11087971 intron JIL-1 - chr3L 11088877 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 RAL-804 890 chr3L 11105296 11105307 chr3L 11107007 11107018 X-element 4 1711 6.5 3.0 4.8 0.7 1722 chr3L 11105296 intergenic not near genes chr3L 11106157 intergenic not near genes chr3L 11107018 3` UTR CG32073 - chr3L_4_11105001 chr3L_11105001 RAL-804 891 chr3L 11145545 11145554 chr3L 11145635 11145643 4 90 0.0 2.0 1.0 2.0 98 chr3L 11145545 intron CG32082 + chr3L 11145594 intron CG32082 + chr3L 11145643 intron CG32082 + chr3L_4_11145001 chr3L_11145001 RAL-804 892 chr3L 11187709 11187742 chr3L 11187790 11187823 5 81 0.0 0.0 0.0 5.0 114 chr3L 11187709 intron GlcAT-P - chr3L 11187766 intron GlcAT-P - chr3L 11187823 intron GlcAT-P - chr3L_5_11185001 chr3L_11185001 RAL-804 893 chr3L 11249864 11249891 chr3L 11249947 11249974 5 83 1.0 1.5 1.2 2.3 110 chr3L 11249864 5` UTR CR44717 + chr3L 11249919 5` UTR CR44717 + chr3L 11249974 5` UTR CR44717 + chr3L_5_11245001 chr3L_11245001 RAL-804 894 chr3L 11264464 11264491 chr3L 11271416 11271443 17.6 7 6952 5.5 1.5 3.5 1.6 6979 chr3L 11264464 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271443 intergenic not near genes chr3L_7_11265001 chr3L_11265001 RAL-804 895 chr3L 11329692 11329724 chr3L 11332896 11332921 jockey 9 3201 3.0 3.0 3.0 2.2 3229 chr3L 11329692 intergenic not near genes chr3L 11331306 intergenic not near genes chr3L 11332921 intergenic not near genes chr3L_9_11330001 chr3L_11330001 RAL-804 896 chr3L 11471598 11471612 chr3L 11471672 11471690 5 77 2.5 1.0 1.8 1.8 92 chr3L 11471598 intergenic not near genes chr3L 11471644 intergenic not near genes chr3L 11471690 intergenic not near genes chr3L_5_11470001 chr3L_11470001 RAL-804 897 chr3L 11493159 11493178 chr3L 11493241 11493260 6 82 0.5 2.0 1.2 2.7 101 chr3L 11493159 intron chrb + chr3L 11493210 intron chrb + chr3L 11493260 intron chrb + chr3L_6_11490001 chr3L_11490001 RAL-804 898 chr3L 11579558 11579583 chr3L 11579663 11579689 6 105 1.0 3.0 2.0 2.0 131 chr3L 11579558 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579689 intergenic CG43390 - chr3L_6_11575001 chr3L_11575001 RAL-804 899 chr3L 11587943 11587953 chr3L 11588019 11588029 5 76 2.0 6.0 4.0 1.0 86 chr3L 11587943 intergenic rt - chr3L 11587986 intergenic rt - chr3L 11588029 intergenic rt - chr3L_5_11585001 chr3L_11585001 RAL-804 900 chr3L 11588731 11588759 chr3L 11588887 11588894 10 153 2.5 3.0 2.8 2.6 163 chr3L 11588731 intergenic not near genes chr3L 11588812 intergenic not near genes chr3L 11588894 intergenic not near genes chr3L_10_11585001 chr3L_11585001 RAL-804 901 chr3L 11601111 11601127 chr3L 11601196 11601219 5 90 0.0 0.5 0.2 4.2 108 chr3L 11601111 intron CG7368 + chr3L 11601165 intron CG7368 + chr3L 11601219 intron CG7368 + chr3L_5_11600001 chr3L_11600001 RAL-804 902 chr3L 11678096 11678119 chr3L 11678183 11678206 5 87 2.0 2.5 2.2 1.6 110 chr3L 11678096 intron CG32085 - chr3L 11678151 intron CG32085 - chr3L 11678206 intron CG32085 - chr3L_5_11675001 chr3L_11675001 RAL-804 903 chr3L 11723081 11723108 chr3L 11727876 11727903 Doc 8 4795 5.0 2.5 3.8 1.7 4822 chr3L 11723081 3` UTR Bmcp + chr3L 11725492 intron Bmcp + chr3L 11727903 3` UTR Bmcp + chr3L_8_11725001 chr3L_11725001 RAL-804 904 chr3L 11742588 11742605 chr3L 11742792 11742808 5 204 1.5 2.0 1.8 1.8 220 chr3L 11742588 intron CG6024 - chr3L 11742698 intron CG6024 - chr3L 11742808 intron CG6024 - chr3L_5_11740001 chr3L_11740001 RAL-804 905 chr3L 11744017 11744041 chr3L 11744125 11744149 11 108 2.0 0.0 1.0 5.5 132 chr3L 11744017 exon CG6024 - chr3L 11744083 intron CG6024 - chr3L 11744149 intron CG6024 - chr3L_11_11740001 chr3L_11740001 RAL-804 906 chr3L 11757917 11757933 chr3L 11758013 11758030 8 97 4.0 0.0 2.0 2.7 113 chr3L 11757917 intron CG6024 - chr3L 11757974 intron CG6024 - chr3L 11758030 intron CG6024 - chr3L_8_11755001 chr3L_11755001 RAL-804 907 chr3L 11849331 11849357 chr3L 11849431 11849457 6 100 4.5 2.0 3.2 1.4 126 chr3L 11849331 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849457 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RAL-804 908 chr3L 11943499 11943519 chr3L 11943600 11943620 5 101 0.5 2.5 1.5 2.0 121 chr3L 11943499 intergenic Rpt4R +,CG5883 - chr3L 11943560 intergenic Rpt4R +,CG5883 - chr3L 11943620 intergenic CG5883 -,Rpt4R + chr3L_5_11940001 chr3L_11940001 RAL-804 909 chr3L 11984567 11984600 chr3L 11984658 11984677 5 88 1.0 0.5 0.8 2.8 110 chr3L 11984567 intergenic CG6938 + chr3L 11984622 intergenic CG6938 + chr3L 11984677 intergenic CG6938 + chr3L_5_11980001 chr3L_11980001 RAL-804 910 chr3L 12013914 12013938 chr3L 12014005 12014029 8 91 2.5 2.0 2.2 2.5 115 chr3L 12013914 intron rols - chr3L 12013972 intron rols - chr3L 12014029 intron rols - chr3L_8_12010001 chr3L_12010001 RAL-804 911 chr3L 12015020 12015053 chr3L 12015184 12015195 11 159 1.5 4.0 2.8 2.9 175 chr3L 12015020 intron rols - chr3L 12015108 intron rols - chr3L 12015195 intron rols - chr3L_11_12015001 chr3L_12015001 RAL-804 912 chr3L 12052703 12052727 chr3L 12052792 12052816 7 89 4.0 1.5 2.8 1.8 113 chr3L 12052703 intron rols - chr3L 12052760 intron rols - chr3L 12052816 intron rols - chr3L_7_12050001 chr3L_12050001 RAL-804 913 chr3L 12075430 12075444 chr3L 12075519 12075533 4 89 2.5 0.0 1.2 1.8 103 chr3L 12075430 intron Sema-5c - chr3L 12075482 intron Sema-5c - chr3L 12075533 intron Sema-5c - chr3L_4_12075001 chr3L_12075001 RAL-804 914 chr3L 12089082 12089111 chr3L 12089162 12089191 9 80 1.0 2.5 1.8 3.2 109 chr3L 12089082 3` UTR CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089191 3` UTR CG17154 + chr3L_9_12085001 chr3L_12085001 RAL-804 915 chr3L 12119759 12119790 chr3L 12119856 12119887 5 96 2.5 0.0 1.2 2.3 128 chr3L 12119759 3` UTR ssp + chr3L 12119823 intergenic ssp +,CG11560 + chr3L 12119887 intergenic ssp +,CG11560 + chr3L_5_12115001 chr3L_12115001 RAL-804 916 chr3L 12158495 12158514 chr3L 12158716 12158735 10 221 15.0 13.5 14.2 0.7 240 chr3L 12158495 intron CG9760 - chr3L 12158615 intron CG9760 - chr3L 12158735 intron CG9760 - chr3L_10_12155001 chr3L_12155001 RAL-804 917 chr3L 12158775 12158808 chr3L 12160245 12160278 9 1475 44.5 48.5 46.5 0.2 1503 chr3L 12158775 intron CG9760 - chr3L 12159526 exon CG9760 - chr3L 12160278 intron CG9760 - chr3L_9_12155001 chr3L_12155001 RAL-804 918 chr3L 12156437 12156452 chr3L 12160322 12160347 8 3887 12.5 26.0 19.2 0.4 3910 chr3L 12156437 3` UTR Nrx-IV + chr3L 12158392 intron CG9760 - chr3L 12160347 intron CG9760 - chr3L_8_12155001 chr3L_12155001 RAL-804 919 chr3L 12231377 12231405 chr3L 12231676 12231704 8 301 22.0 23.5 22.8 0.3 327 chr3L 12231377 intron app - chr3L 12231540 intron app - chr3L 12231704 intron app - chr3L_8_12230001 chr3L_12230001 RAL-804 920 chr3L 12353927 12353945 chr3L 12354016 12354019 5 86 1.5 2.0 1.8 1.8 92 chr3L 12353927 intergenic not near genes chr3L 12353973 intergenic not near genes chr3L 12354019 intergenic not near genes chr3L_5_12350001 chr3L_12350001 RAL-804 921 chr3L 12369540 12369562 chr3L 12369630 12369652 4 90 1.0 1.0 1.0 2.0 112 chr3L 12369540 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369652 intron Ncc69 - chr3L_4_12365001 chr3L_12365001 RAL-804 922 chr3L 12412730 12412922 chr3L 12412815 12413003 12 84 2.0 1.5 1.8 4.3 273 chr3L 12412730 intron CG32103 - chr3L 12412866 intron CG32103 - chr3L 12413003 intron CG32103 - chr3L_12_12410001 chr3L_12410001 RAL-804 923 chr3L 12460314 12460344 chr3L 12460391 12460421 6 77 0.0 0.5 0.2 5.0 107 chr3L 12460314 intergenic not near genes chr3L 12460368 intergenic not near genes chr3L 12460421 intergenic not near genes chr3L_6_12460001 chr3L_12460001 RAL-804 924 chr3L 12506988 12507005 chr3L 12507066 12507078 4 77 2.0 3.5 2.8 1.1 90 chr3L 12506988 intron CG10654 - chr3L 12507033 intron CG10654 - chr3L 12507078 intron CG10654 - chr3L_4_12505001 chr3L_12505001 RAL-804 925 chr3L 12656118 12656148 chr3L 12656197 12656224 8 78 0.5 5.5 3.0 2.0 106 chr3L 12656118 intergenic not near genes chr3L 12656171 intergenic not near genes chr3L 12656224 intergenic not near genes chr3L_8_12655001 chr3L_12655001 RAL-804 926 chr3L 12788418 12788440 chr3L 12788538 12788560 7 120 1.5 2.0 1.8 2.5 142 chr3L 12788418 intron Atg1 - chr3L 12788489 intron Atg1 - chr3L 12788560 exon Atg1 - chr3L_7_12785001 chr3L_12785001 RAL-804 927 chr3L 12801979 12802010 chr3L 12802055 12802085 8 74 3.0 0.0 1.5 3.2 106 chr3L 12801979 intron Atg1 - chr3L 12802032 intron Atg1 - chr3L 12802085 intron Atg1 - chr3L_8_12800001 chr3L_12800001 RAL-804 928 chr3L 12874945 12874961 chr3L 12877236 12877253 jockey 5 2292 2.5 2.0 2.2 1.6 2308 chr3L 12874945 intergenic not near genes chr3L 12876099 intergenic not near genes chr3L 12877253 intergenic not near genes chr3L_5_12875001 chr3L_12875001 RAL-804 929 chr3L 12879219 12879246 chr3L 12879301 12879329 7 82 1.5 0.5 1.0 3.5 110 chr3L 12879219 intergenic not near genes chr3L 12879274 intergenic not near genes chr3L 12879329 intergenic not near genes chr3L_7_12875001 chr3L_12875001 RAL-804 930 chr3L 12894800 12894815 chr3L 12894878 12894893 7 78 5.0 7.0 6.0 1.0 93 chr3L 12894800 intergenic CG14118 + chr3L 12894846 intergenic CG14118 + chr3L 12894893 intergenic CG14118 + chr3L_7_12890001 chr3L_12890001 RAL-804 931 chr3L 12900654 12900664 chr3L 12900954 12900960 4 299 2.0 3.0 2.5 1.1 306 chr3L 12900654 intergenic not near genes chr3L 12900807 intergenic CG12520 - chr3L 12900960 intergenic CG12520 - chr3L_4_12900001 chr3L_12900001 RAL-804 932 chr3L 12919278 12919287 chr3L 12924749 12924760 Rt1c 5 5472 10.5 3.5 7.0 0.6 5482 chr3L 12919278 intergenic not near genes chr3L 12922019 intergenic not near genes chr3L 12924760 intergenic not near genes chr3L_5_12920001 chr3L_12920001 RAL-804 933 chr3L 12919288 12919309 chr3L 12924747 12924759 Rt1c 14 5467 4.5 3.5 4.0 2.8 5471 chr3L 12919288 intergenic not near genes chr3L 12922024 intergenic not near genes chr3L 12924759 intergenic not near genes chr3L_14_12920001 chr3L_12920001 RAL-804 934 chr3L 12955128 12955158 chr3L 12955204 12955234 8 76 3.0 1.0 2.0 2.7 106 chr3L 12955128 intergenic CG10752 - chr3L 12955181 intergenic not near genes chr3L 12955234 intergenic not near genes chr3L_8_12955001 chr3L_12955001 RAL-804 935 chr3L 12957788 12957810 chr3L 12962268 12962292 copia 6 4482 3.0 4.0 3.5 1.3 4504 chr3L 12957788 intergenic not near genes chr3L 12960040 intergenic not near genes chr3L 12962292 intergenic not near genes chr3L_6_12960001 chr3L_12960001 RAL-804 936 chr3L 12978761 12978776 chr3L 12978840 12978855 4 79 3.0 0.0 1.5 1.6 94 chr3L 12978761 intergenic not near genes chr3L 12978808 intergenic not near genes chr3L 12978855 intergenic not near genes chr3L_4_12975001 chr3L_12975001 RAL-804 937 chr3L 13069562 13069578 chr3L 13069641 13069657 6 79 2.0 1.5 1.8 2.1 95 chr3L 13069562 intergenic not near genes chr3L 13069610 intergenic not near genes chr3L 13069657 intergenic not near genes chr3L_6_13065001 chr3L_13065001 RAL-804 938 chr3L 13070717 13070749 chr3L 13070813 13070848 9 97 1.0 2.0 1.5 3.6 131 chr3L 13070717 intergenic not near genes chr3L 13070782 intergenic not near genes chr3L 13070848 intergenic not near genes chr3L_9_13070001 chr3L_13070001 RAL-804 939 chr3L 13123154 13123188 chr3L 13123244 13123278 13 89 3.5 3.0 3.2 3.1 124 chr3L 13123154 intergenic not near genes chr3L 13123216 intergenic not near genes chr3L 13123278 intergenic not near genes chr3L_13_13120001 chr3L_13120001 RAL-804 940 chr3L 13194065 13194098 chr3L 13194144 13194172 7 78 1.5 1.5 1.5 2.8 107 chr3L 13194065 intergenic not near genes chr3L 13194118 intergenic not near genes chr3L 13194172 intergenic not near genes chr3L_7_13190001 chr3L_13190001 RAL-804 941 chr3L 13296519 13296541 chr3L 13296610 13296632 7 91 2.5 1.5 2.0 2.3 113 chr3L 13296519 intergenic Sfp70A4 -,CR45253 + chr3L 13296576 3` UTR Sfp70A4 - chr3L 13296632 3` UTR Sfp70A4 - chr3L_7_13295001 chr3L_13295001 RAL-804 942 chr3L 13308443 13308464 chr3L 13308814 13308835 5 370 0.0 1.5 0.8 2.8 392 chr3L 13308443 intergenic not near genes chr3L 13308639 intergenic not near genes chr3L 13308835 intergenic not near genes chr3L_5_13305001 chr3L_13305001 RAL-804 943 chr3L 13372952 13372973 chr3L 13373040 13373061 7 87 2.0 3.0 2.5 2.0 109 chr3L 13372952 intergenic not near genes chr3L 13373006 intergenic not near genes chr3L 13373061 intergenic not near genes chr3L_7_13370001 chr3L_13370001 RAL-804 944 chr3L 13525156 13525186 chr3L 13532951 13532982 roo 5 7796 3.5 5.0 4.2 1.0 7826 chr3L 13525156 intergenic not near genes chr3L 13529069 intergenic not near genes chr3L 13532982 intergenic not near genes chr3L_5_13525001 chr3L_13525001 RAL-804 945 chr3L 13667247 13667268 chr3L 13667325 13667347 7 77 3.5 2.0 2.8 1.8 100 chr3L 13667247 intron bru-3 - chr3L 13667297 intron bru-3 - chr3L 13667347 intron bru-3 - chr3L_7_13665001 chr3L_13665001 RAL-804 946 chr3L 13677532 13677547 chr3L 13677609 13677624 6 77 2.5 1.5 2.0 2.0 92 chr3L 13677532 intron bru-3 - chr3L 13677578 intron bru-3 - chr3L 13677624 intron bru-3 - chr3L_6_13675001 chr3L_13675001 RAL-804 947 chr3L 13804557 13804577 chr3L 13822843 13822863 roo 4 18286 0.5 5.5 3.0 1.0 18306 chr3L 13804557 intergenic not near genes chr3L 13813710 intergenic not near genes chr3L 13822863 intergenic not near genes chr3L_4_13810001 chr3L_13810001 RAL-804 948 chr3L 13906607 13906624 chr3L 13906715 13906732 6 108 1.0 1.0 1.0 3.0 125 chr3L 13906607 intergenic Rgl - chr3L 13906670 intergenic Rgl - chr3L 13906732 intergenic Rgl - chr3L_6_13905001 chr3L_13905001 RAL-804 949 chr3L 13964952 13964986 chr3L 13965115 13965149 13 163 0.0 3.0 1.5 5.2 197 chr3L 13964952 intergenic Meics -,Nxf3 +,ssp2 + chr3L 13965050 intergenic Nxf3 +,ssp2 +,Meics - chr3L 13965149 intergenic Nxf3 +,ssp2 +,Meics - chr3L_13_13965001 chr3L_13965001 RAL-804 950 chr3L 14185155 14185188 chr3L 14185231 14185264 9 76 1.0 1.5 1.2 4.1 109 chr3L 14185155 intergenic not near genes chr3L 14185210 intergenic not near genes chr3L 14185264 intergenic not near genes chr3L_9_14185001 chr3L_14185001 RAL-804 951 chr3L 14196427 14196445 chr3L 14196512 14196530 6 85 2.5 1.0 1.8 2.1 103 chr3L 14196427 intron nuf + chr3L 14196478 intron nuf + chr3L 14196530 intron nuf + chr3L_6_14195001 chr3L_14195001 RAL-804 952 chr3L 14239988 14240001 chr3L 14240085 14240098 7 96 0.5 2.5 1.5 2.8 110 chr3L 14239988 intergenic not near genes chr3L 14240043 intergenic not near genes chr3L 14240098 intergenic not near genes chr3L_7_14240001 chr3L_14240001 RAL-804 953 chr3L 14245567 14245589 chr3L 14245661 14245683 1360 6 94 4.5 1.5 3.0 1.5 116 chr3L 14245567 3` UTR CR44561 - chr3L 14245625 3` UTR CR44561 - chr3L 14245683 3` UTR CR44561 - chr3L_6_14245001 chr3L_14245001 RAL-804 954 chr3L 14282587 14282606 chr3L 14282666 14282686 10 78 5.0 4.0 4.5 1.8 99 chr3L 14282587 intron fz + chr3L 14282636 intron fz + chr3L 14282686 intron fz + chr3L_10_14280001 chr3L_14280001 RAL-804 955 chr3L 14295986 14296002 chr3L 14296472 14296486 roo 6 486 4.0 1.0 2.5 1.7 500 chr3L 14295986 intron fz + chr3L 14296236 intron fz + chr3L 14296486 intron fz + chr3L_6_14295001 chr3L_14295001 RAL-804 956 chr3L 14296003 14296014 chr3L 14296471 14296500 roo 6 482 5.0 1.0 3.0 1.5 497 chr3L 14296003 intron fz + chr3L 14296252 intron fz + chr3L 14296500 intron fz + chr3L_6_14295001 chr3L_14295001 RAL-804 957 chr3L 14302939 14302965 chr3L 14303023 14303051 9 82 1.0 2.5 1.8 3.2 112 chr3L 14302939 intron fz + chr3L 14302995 intron fz + chr3L 14303051 intron fz + chr3L_9_14300001 chr3L_14300001 RAL-804 958 chr3L 14312028 14312056 chr3L 14316834 14316849 X-element 6 4804 1.0 2.0 1.5 2.4 4821 chr3L 14312028 exon fz + chr3L 14314438 intron fz + chr3L 14316849 intron fz + chr3L_6_14310001 chr3L_14310001 RAL-804 959 chr3L 14345731 14345763 chr3L 14345809 14345841 8 73 2.0 4.0 3.0 2.0 110 chr3L 14345731 intron fz + chr3L 14345786 intron fz + chr3L 14345841 intron fz + chr3L_8_14345001 chr3L_14345001 RAL-804 960 chr3L 14399178 14399193 chr3L 14399267 14399282 10 89 2.5 0.0 1.2 4.5 104 chr3L 14399178 intergenic not near genes chr3L 14399230 intergenic not near genes chr3L 14399282 intergenic not near genes chr3L_10_14395001 chr3L_14395001 RAL-804 961 chr3L 14411863 14411899 chr3L 14411942 14411978 9 79 0.5 1.5 1.0 4.5 115 chr3L 14411863 intron CG3919 + chr3L 14411920 intron CG3919 + chr3L 14411978 intron CG3919 + chr3L_9_14410001 chr3L_14410001 RAL-804 962 chr3L 14468452 14468470 chr3L 14473658 14473676 copia 5 5206 2.5 1.5 2.0 1.7 5224 chr3L 14468452 intron bbg - chr3L 14471064 intron bbg - chr3L 14473676 intron bbg - chr3L_5_14470001 chr3L_14470001 RAL-804 963 chr3L 14565750 14565771 chr3L 14565841 14565862 5 91 1.0 0.5 0.8 2.8 112 chr3L 14565750 intergenic not near genes chr3L 14565806 intergenic not near genes chr3L 14565862 intergenic not near genes chr3L_5_14565001 chr3L_14565001 RAL-804 964 chr3L 14584158 14584188 chr3L 14584245 14584275 13 87 0.5 1.0 0.8 7.2 117 chr3L 14584158 intron HGTX - chr3L 14584216 intron HGTX - chr3L 14584275 intron HGTX - chr3L_13_14580001 chr3L_14580001 RAL-804 965 chr3L 14633788 14633815 chr3L 14633884 14633911 9 96 0.0 0.0 0.0 9.0 123 chr3L 14633788 intron dlp + chr3L 14633850 intron dlp + chr3L 14633911 intron dlp + chr3L_9_14630001 chr3L_14630001 RAL-804 966 chr3L 14652642 14652666 chr3L 14652721 14652745 9 79 4.0 3.0 3.5 2.0 103 chr3L 14652642 intron dlp + chr3L 14652694 intron dlp + chr3L 14652745 intron dlp + chr3L_9_14650001 chr3L_14650001 RAL-804 967 chr3L 14721185 14721206 chr3L 14723026 14723035 Rt1c 8 1839 4.5 3.0 3.8 1.7 1850 chr3L 14721185 intron ome + chr3L 14722110 intron ome + chr3L 14723035 intron ome + chr3L_8_14720001 chr3L_14720001 RAL-804 968 chr3L 14729512 14729546 chr3L 14729625 14729659 12 110 1.0 0.0 0.5 8.0 147 chr3L 14729512 intron ome + chr3L 14729586 intron ome + chr3L 14729659 intron ome + chr3L_12_14725001 chr3L_14725001 RAL-804 969 chr3L 14740892 14740920 chr3L 14740981 14741009 4 89 2.0 2.0 2.0 1.3 117 chr3L 14740892 intron ome + chr3L 14740950 intron ome + chr3L 14741009 intron ome + chr3L_4_14740001 chr3L_14740001 RAL-804 970 chr3L 15085051 15085074 chr3L 15086217 15086240 1360 6 1165 1.5 3.0 2.2 1.9 1189 chr3L 15085051 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086240 intron cp309 - chr3L_6_15085001 chr3L_15085001 RAL-804 971 chr3L 15105079 15105101 chr3L 15105181 15105203 9 102 5.0 0.5 2.8 2.4 124 chr3L 15105079 intron CTPsyn + chr3L 15105141 intron CTPsyn + chr3L 15105203 intron CTPsyn + chr3L_9_15105001 chr3L_15105001 RAL-804 972 chr3L 15177349 15177378 chr3L 15177434 15177463 5 85 1.5 3.0 2.2 1.6 114 chr3L 15177349 intergenic not near genes chr3L 15177406 intergenic not near genes chr3L 15177463 intergenic not near genes chr3L_5_15175001 chr3L_15175001 RAL-804 973 chr3L 15233555 15233582 chr3L 15233636 15233663 11 81 0.5 4.5 2.5 3.1 108 chr3L 15233555 intergenic not near genes chr3L 15233609 intergenic not near genes chr3L 15233663 intergenic not near genes chr3L_11_15230001 chr3L_15230001 RAL-804 974 chr3L 15286743 15286768 chr3L 15286821 15286849 6 80 1.0 3.0 2.0 2.0 106 chr3L 15286743 intergenic not near genes chr3L 15286796 intergenic not near genes chr3L 15286849 intergenic not near genes chr3L_6_15285001 chr3L_15285001 RAL-804 975 chr3L 15384957 15384989 chr3L 15385085 15385117 10 128 2.0 1.5 1.8 3.6 160 chr3L 15384957 intergenic not near genes chr3L 15385037 intergenic not near genes chr3L 15385117 intergenic not near genes chr3L_10_15385001 chr3L_15385001 RAL-804 976 chr3L 15406042 15406055 chr3L 15406115 15406135 5 80 1.0 2.5 1.8 1.8 93 chr3L 15406042 intergenic not near genes chr3L 15406088 intergenic not near genes chr3L 15406135 intergenic not near genes chr3L_5_15405001 chr3L_15405001 RAL-804 977 chr3L 15423762 15423776 chr3L 15426606 15426620 opus 7 2844 2.0 3.0 2.5 2.0 2858 chr3L 15423762 intergenic not near genes chr3L 15425191 intergenic not near genes chr3L 15426620 intergenic not near genes chr3L_7_15425001 chr3L_15425001 RAL-804 978 chr3L 15691416 15691436 chr3L 15691498 15691518 5 82 2.0 1.0 1.5 2.0 102 chr3L 15691416 intron CG34451 - chr3L 15691467 intron CG34451 - chr3L 15691518 intron CG34451 - chr3L_5_15690001 chr3L_15690001 RAL-804 979 chr3L 15832258 15832285 chr3L 15832339 15832366 10 81 2.5 4.0 3.2 2.4 108 chr3L 15832258 intergenic CG12713 +,dbo + chr3L 15832312 intergenic CG12713 +,dbo + chr3L 15832366 intergenic CG12713 +,dbo + chr3L_10_15830001 chr3L_15830001 RAL-804 980 chr3L 15846653 15846677 chr3L 15846743 15846767 7 89 2.0 3.5 2.8 1.8 114 chr3L 15846653 intergenic not near genes chr3L 15846710 intergenic not near genes chr3L 15846767 intergenic not near genes chr3L_7_15845001 chr3L_15845001 RAL-804 981 chr3L 16024687 16024702 chr3L 16024768 16024784 5 82 3.0 2.0 2.5 1.4 97 chr3L 16024687 intron Notum + chr3L 16024736 intron Notum + chr3L 16024784 intron Notum + chr3L_5_16020001 chr3L_16020001 RAL-804 982 chr3L 16159264 16159299 chr3L 16159341 16159376 13 77 0.0 6.0 3.0 3.2 112 chr3L 16159264 intron CG5151 - chr3L 16159320 intron CG5151 - chr3L 16159376 intron CG5151 - chr3L_13_16155001 chr3L_16155001 RAL-804 983 chr3L 16184104 16184135 chr3L 16188923 16188954 X-element 13 4819 2.0 0.5 1.2 5.9 4850 chr3L 16184104 intergenic not near genes chr3L 16186529 intergenic not near genes chr3L 16188954 intergenic not near genes chr3L_13_16185001 chr3L_16185001 RAL-804 984 chr3L 16198389 16198414 chr3L 16198474 16198496 7 84 1.0 3.0 2.0 2.3 107 chr3L 16198389 intron CG33687 + chr3L 16198442 exon CG33687 + chr3L 16198496 exon CG33687 + chr3L_7_16195001 chr3L_16195001 RAL-804 985 chr3L 16212811 16212837 chr3L 16212902 16212928 6 91 0.5 2.5 1.5 2.4 117 chr3L 16212811 intergenic CG13073 - chr3L 16212870 intergenic CG13073 - chr3L 16212928 intergenic CG13073 - chr3L_6_16210001 chr3L_16210001 RAL-804 986 chr3L 16236352 16236372 chr3L 16236466 16236487 8 114 3.0 1.5 2.2 2.5 135 chr3L 16236352 3` UTR l(3)72Dp + chr3L 16236420 3` UTR l(3)72Dp + chr3L 16236487 3` UTR l(3)72Dp + chr3L_8_16235001 chr3L_16235001 RAL-804 987 chr3L 16279085 16279102 chr3L 16279166 16279183 6 81 3.0 2.5 2.8 1.6 98 chr3L 16279085 intron CG13050 - chr3L 16279134 intron CG13050 - chr3L 16279183 intron CG13050 - chr3L_6_16275001 chr3L_16275001 RAL-804 988 chr3L 16359958 16359987 chr3L 16360044 16360073 7 86 6.5 1.5 4.0 1.4 115 chr3L 16359958 intron CG45057 - chr3L 16360016 intron CG45057 - chr3L 16360073 intron CG45057 - chr3L_7_16360001 chr3L_16360001 RAL-804 989 chr3L 16443852 16443874 chr3L 16446192 16446214 Doc 7 2339 2.5 4.0 3.2 1.7 2362 chr3L 16443852 intron,intron CG33158 +,dsx-c73A - chr3L 16445033 intron,intron CG33158 +,dsx-c73A - chr3L 16446214 intron,intron CG33158 +,dsx-c73A - chr3L_7_16445001 chr3L_16445001 RAL-804 990 chr3L 16493975 16494003 chr3L 16494492 16494510 jockey 9 514 3.5 3.5 3.5 2.0 535 chr3L 16493975 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494242 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494510 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_9_16490001 chr3L_16490001 RAL-804 991 chr3L 16540060 16540077 chr3L 16540148 16540163 5 88 0.0 4.0 2.0 1.7 103 chr3L 16540060 intron CG43373 - chr3L 16540112 intron CG43373 - chr3L 16540163 intron CG43373 - chr3L_5_16540001 chr3L_16540001 RAL-804 992 chr3L 16616510 16616538 chr3L 16621838 16621866 297 6 5328 2.0 3.5 2.8 1.6 5356 chr3L 16616510 3` UTR Abl - chr3L 16619188 3` UTR Abl - chr3L 16621866 3` UTR Abl - chr3L_6_16615001 chr3L_16615001 RAL-804 993 chr3L 16817876 16817905 chr3L 16818015 16818045 15 139 4.5 3.5 4.0 3.0 169 chr3L 16817876 intron,intron nudC +,CG13024 - chr3L 16817960 intron,intron nudC +,CG13024 - chr3L 16818045 intron,intron nudC +,CG13024 - chr3L_15_16815001 chr3L_16815001 RAL-804 994 chr3L 16874543 16874573 chr3L 16874704 16874734 7 160 2.0 2.5 2.2 2.2 191 chr3L 16874543 intron Lmpt + chr3L 16874638 intron Lmpt + chr3L 16874734 intron Lmpt + chr3L_7_16870001 chr3L_16870001 RAL-804 995 chr3L 16888812 16888838 chr3L 16889102 16889128 10 290 4.5 3.0 3.8 2.1 316 chr3L 16888812 intron Lmpt + chr3L 16888970 intron Lmpt + chr3L 16889128 intron Lmpt + chr3L_10_16885001 chr3L_16885001 RAL-804 996 chr3L 16945730 16945759 chr3L 16954878 16954911 roo 11 9150 5.5 3.5 4.5 2.0 9181 chr3L 16945730 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954911 5` UTR Nc73EF + chr3L_11_16950001 chr3L_16950001 RAL-804 997 chr3L 17026790 17026821 chr3L 17026871 17026902 8 81 4.5 1.0 2.8 2.1 112 chr3L 17026790 exon Fit2 + chr3L 17026846 3` UTR Fit2 + chr3L 17026902 3` UTR Fit2 + chr3L_8_17025001 chr3L_17025001 RAL-804 998 chr3L 17085002 17085034 chr3L 17094151 17094177 roo 5 9148 4.5 2.0 3.2 1.2 9175 chr3L 17085002 intron Rbp6 - chr3L 17089590 intron Rbp6 - chr3L 17094177 intron Rbp6 - chr3L_5_17085001 chr3L_17085001 RAL-804 999 chr3L 17172643 17172675 chr3L 17172727 17172744 9 82 2.0 0.0 1.0 4.5 101 chr3L 17172643 intron Rbp6 - chr3L 17172694 intron Rbp6 - chr3L 17172744 intron Rbp6 - chr3L_9_17170001 chr3L_17170001 RAL-804 1000 chr3L 17202468 17202495 chr3L 17202630 17202657 10 162 3.0 1.5 2.2 3.1 189 chr3L 17202468 intron Rbp6 - chr3L 17202562 intron Rbp6 - chr3L 17202657 intron Rbp6 - chr3L_10_17200001 chr3L_17200001 RAL-804 1001 chr3L 17202900 17202928 chr3L 17202989 17203014 9 88 2.5 2.5 2.5 2.6 114 chr3L 17202900 intron Rbp6 - chr3L 17202957 intron Rbp6 - chr3L 17203014 intron Rbp6 - chr3L_9_17200001 chr3L_17200001 RAL-804 1002 chr3L 17237383 17237406 chr3L 17237535 17237558 7 152 1.0 0.5 0.8 3.9 175 chr3L 17237383 intron Rbp6 - chr3L 17237470 intron Rbp6 - chr3L 17237558 intron Rbp6 - chr3L_7_17235001 chr3L_17235001 RAL-804 1003 chr3L 17344631 17344647 chr3L 17344714 17344730 7 83 7.0 1.5 4.2 1.3 99 chr3L 17344631 exon brv2 - chr3L 17344680 5` UTR brv2 - chr3L 17344730 intergenic brv2 -,Mip - chr3L_7_17340001 chr3L_17340001 RAL-804 1004 chr3L 17367434 17367458 chr3L 17367528 17367552 5 94 2.5 3.0 2.8 1.3 118 chr3L 17367434 intergenic CR45688 +,Cad74A - chr3L 17367493 intergenic CR45688 +,Cad74A - chr3L 17367552 intergenic CR45688 +,Cad74A - chr3L_5_17365001 chr3L_17365001 RAL-804 1005 chr3L 17389403 17389418 chr3L 17389482 17389497 4 76 3.5 0.5 2.0 1.3 94 chr3L 17389403 intergenic CG13731 - chr3L 17389450 intergenic CG13731 - chr3L 17389497 intergenic not near genes chr3L_4_17385001 chr3L_17385001 RAL-804 1006 chr3L 17516980 17517001 chr3L 17524538 17524559 412 7 7557 3.5 4.5 4.0 1.4 7579 chr3L 17516980 intron CG7564 + chr3L 17520770 intron CG7564 + chr3L 17524559 3` UTR CG7564 + chr3L_7_17520001 chr3L_17520001 RAL-804 1007 chr3L 17517002 17517013 chr3L 17524536 17524571 412 6 7549 2.5 3.5 3.0 1.5 7569 chr3L 17517002 intron CG7564 + chr3L 17520786 intron CG7564 + chr3L 17524571 3` UTR CG7564 + chr3L_6_17520001 chr3L_17520001 RAL-804 1008 chr3L 17580588 17580605 chr3L 17580764 17580780 8 176 4.0 0.0 2.0 2.7 192 chr3L 17580588 intron Eip74EF - chr3L 17580684 intron Eip74EF - chr3L 17580780 intron Eip74EF - chr3L_8_17580001 chr3L_17580001 RAL-804 1009 chr3L 17646015 17646047 chr3L 17646182 17646213 13 166 27.5 24.5 26.0 0.5 198 chr3L 17646015 exon CG43085 - chr3L 17646114 exon CG43085 - chr3L 17646213 exon CG43085 - chr3L_13_17645001 chr3L_17645001 RAL-804 1010 chr3L 17789849 17789877 chr3L 17789925 17789953 4 76 0.0 3.5 1.8 1.4 104 chr3L 17789849 intergenic not near genes chr3L 17789901 intergenic not near genes chr3L 17789953 intergenic not near genes chr3L_4_17785001 chr3L_17785001 RAL-804 1011 chr3L 17837630 17837656 chr3L 17837716 17837744 10 88 1.5 2.5 2.0 3.3 114 chr3L 17837630 exon Grd + chr3L 17837687 intron Grd + chr3L 17837744 exon Grd + chr3L_10_17835001 chr3L_17835001 RAL-804 1012 chr3L 17914322 17914352 chr3L 17914981 17915011 11 658 5.5 2.5 4.0 2.2 689 chr3L 17914322 intergenic not near genes chr3L 17914666 intergenic not near genes chr3L 17915011 intergenic not near genes chr3L_11_17910001 chr3L_17910001 RAL-804 1013 chr3L 17918373 17918404 chr3L 17921176 17921207 opus 7 2802 2.5 2.0 2.2 2.2 2834 chr3L 17918373 intergenic not near genes chr3L 17919790 intergenic not near genes chr3L 17921207 intergenic not near genes chr3L_7_17915001 chr3L_17915001 RAL-804 1014 chr3L 17939065 17939093 chr3L 17939165 17939191 13 99 1.5 5.5 3.5 2.9 126 chr3L 17939065 intron CG43174 + chr3L 17939128 intron CG43174 + chr3L 17939191 intron CG43174 + chr3L_13_17935001 chr3L_17935001 RAL-804 1015 chr3L 18000672 18000708 chr3L 18000749 18000785 12 77 1.5 2.0 1.8 4.3 113 chr3L 18000672 intron Eip75B - chr3L 18000728 intron Eip75B - chr3L 18000785 intron Eip75B - chr3L_12_18000001 chr3L_18000001 RAL-804 1016 chr3L 18008832 18008862 chr3L 18008936 18008961 7 102 1.5 2.5 2.0 2.3 129 chr3L 18008832 intron Eip75B - chr3L 18008896 intron Eip75B - chr3L 18008961 intron Eip75B - chr3L_7_18005001 chr3L_18005001 RAL-804 1017 chr3L 18029959 18029982 chr3L 18030036 18030059 5 77 1.5 0.0 0.8 2.8 100 chr3L 18029959 intron Eip75B - chr3L 18030009 intron Eip75B - chr3L 18030059 intron Eip75B - chr3L_5_18030001 chr3L_18030001 RAL-804 1018 chr3L 18092791 18092805 chr3L 18092906 18092920 5 115 1.5 0.0 0.8 2.8 129 chr3L 18092791 intron CG13698 - chr3L 18092856 intron CG13698 - chr3L 18092920 intron CG13698 - chr3L_5_18090001 chr3L_18090001 RAL-804 1019 chr3L 18124424 18124429 chr3L 18124508 18124513 6 84 2.0 3.0 2.5 1.7 89 chr3L 18124424 intergenic not near genes chr3L 18124468 intergenic not near genes chr3L 18124513 intergenic not near genes chr3L_6_18120001 chr3L_18120001 RAL-804 1020 chr3L 18163984 18164003 chr3L 18164186 18164203 4 202 0.5 0.0 0.2 3.3 219 chr3L 18163984 intergenic not near genes chr3L 18164094 intergenic not near genes chr3L 18164203 intergenic not near genes chr3L_4_18160001 chr3L_18160001 RAL-804 1021 chr3L 18208296 18208325 chr3L 18208384 18208412 9 87 0.5 1.5 1.0 4.5 116 chr3L 18208296 intergenic not near genes chr3L 18208354 intergenic not near genes chr3L 18208412 intergenic not near genes chr3L_9_18205001 chr3L_18205001 RAL-804 1022 chr3L 18223166 18223183 chr3L 18223249 18223265 8 83 1.5 0.0 0.8 4.4 99 chr3L 18223166 intergenic not near genes chr3L 18223216 intergenic not near genes chr3L 18223265 intergenic not near genes chr3L_8_18220001 chr3L_18220001 RAL-804 1023 chr3L 18255094 18255120 chr3L 18255173 18255199 9 78 2.0 3.5 2.8 2.4 105 chr3L 18255094 intergenic not near genes chr3L 18255146 intergenic not near genes chr3L 18255199 intergenic not near genes chr3L_9_18255001 chr3L_18255001 RAL-804 1024 chr3L 18262466 18262484 chr3L 18262563 18262581 4 97 1.0 1.5 1.2 1.8 115 chr3L 18262466 intergenic not near genes chr3L 18262524 intergenic not near genes chr3L 18262581 intergenic not near genes chr3L_4_18260001 chr3L_18260001 RAL-804 1025 chr3L 18420076 18420087 chr3L 18420155 18420171 5 83 2.5 3.0 2.8 1.3 95 chr3L 18420076 intergenic not near genes chr3L 18420124 intergenic not near genes chr3L 18420171 intergenic not near genes chr3L_5_18420001 chr3L_18420001 RAL-804 1026 chr3L 18445262 18445271 chr3L 18445340 18445349 4 78 0.5 1.0 0.8 2.2 87 chr3L 18445262 intergenic not near genes chr3L 18445306 intergenic not near genes chr3L 18445349 intergenic not near genes chr3L_4_18445001 chr3L_18445001 RAL-804 1027 chr3L 18456276 18456302 chr3L 18456364 18456390 9 88 2.0 2.5 2.2 2.8 114 chr3L 18456276 intergenic CR44670 - chr3L 18456333 intergenic CR44670 - chr3L 18456390 intergenic CR44670 - chr3L_9_18455001 chr3L_18455001 RAL-804 1028 chr3L 18512406 18512435 chr3L 18512661 18512691 6 256 1.0 3.5 2.2 1.9 285 chr3L 18512406 intergenic not near genes chr3L 18512548 intergenic not near genes chr3L 18512691 intergenic not near genes chr3L_6_18510001 chr3L_18510001 RAL-804 1029 chr3L 18528626 18528652 chr3L 18537787 18537813 roo 5 9161 2.5 2.5 2.5 1.4 9187 chr3L 18528626 intergenic not near genes chr3L 18533220 intergenic not near genes chr3L 18537813 intergenic not near genes chr3L_5_18530001 chr3L_18530001 RAL-804 1030 chr3L 18622158 18622187 chr3L 18622298 18622327 8 140 3.5 1.0 2.2 2.5 169 chr3L 18622158 intergenic not - chr3L 18622242 intergenic not -,bora + chr3L 18622327 intergenic not -,bora + chr3L_8_18620001 chr3L_18620001 RAL-804 1031 chr3L 18656188 18656217 chr3L 18656273 18656302 8 85 2.5 2.5 2.5 2.3 114 chr3L 18656188 intron MYPT-75D + chr3L 18656245 intron MYPT-75D + chr3L 18656302 intron MYPT-75D + chr3L_8_18655001 chr3L_18655001 RAL-804 1032 chr3L 18721776 18721800 chr3L 18721867 18721891 10 91 1.0 1.5 1.2 4.5 115 chr3L 18721776 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721891 intergenic CG12477 - chr3L_10_18720001 chr3L_18720001 RAL-804 1033 chr3L 18725268 18725294 chr3L 18725574 18725600 9 305 3.0 2.5 2.8 2.4 332 chr3L 18725268 intergenic not near genes chr3L 18725434 intergenic not near genes chr3L 18725600 intergenic not near genes chr3L_9_18725001 chr3L_18725001 RAL-804 1034 chr3L 18737325 18737357 chr3L 18737438 18737469 7 113 3.0 1.5 2.2 2.2 144 chr3L 18737325 intergenic not near genes chr3L 18737397 intergenic not near genes chr3L 18737469 intergenic not near genes chr3L_7_18735001 chr3L_18735001 RAL-804 1035 chr3L 18772408 18772439 chr3L 18781089 18781120 roo 13 8681 2.5 3.5 3.0 3.2 8712 chr3L 18772408 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781120 intron ftz-f1 - chr3L_13_18775001 chr3L_18775001 RAL-804 1036 chr3L 18792585 18792597 chr3L 18792667 18792679 5 82 1.0 2.0 1.5 2.0 94 chr3L 18792585 intron ftz-f1 - chr3L 18792632 intron ftz-f1 - chr3L 18792679 intron ftz-f1 - chr3L_5_18790001 chr3L_18790001 RAL-804 1037 chr3L 18833780 18833805 chr3L 18834943 18834969 1360 4 1164 4.0 2.0 3.0 1.0 1189 chr3L 18833780 intron Indy - chr3L 18834374 intron Indy - chr3L 18834969 intron Indy - chr3L_4_18830001 chr3L_18830001 RAL-804 1038 chr3L 18839748 18839757 chr3L 18839831 18839840 4 83 2.0 1.0 1.5 1.6 92 chr3L 18839748 intron Indy - chr3L 18839794 intron Indy - chr3L 18839840 intron Indy - chr3L_4_18835001 chr3L_18835001 RAL-804 1039 chr3L 18933114 18933127 chr3L 18933199 18933212 4 85 1.5 4.0 2.8 1.1 98 chr3L 18933114 intron CG32204 - chr3L 18933163 intron CG32204 - chr3L 18933212 intron CG32204 - chr3L_4_18930001 chr3L_18930001 RAL-804 1040 chr3L 18969549 18969572 chr3L 18969625 18969648 7 74 3.5 1.0 2.2 2.2 99 chr3L 18969549 intergenic not near genes chr3L 18969598 intergenic not near genes chr3L 18969648 intergenic not near genes chr3L_7_18965001 chr3L_18965001 RAL-804 1041 chr3L 19008838 19008872 chr3L 19009176 19009210 jockey 8 338 2.0 4.5 3.2 1.9 372 chr3L 19008838 intron nkd - chr3L 19009024 intron nkd - chr3L 19009210 intron nkd - chr3L_8_19005001 chr3L_19005001 RAL-804 1042 chr3L 19208059 19208078 chr3L 19209433 19209452 Doc 10 1374 3.5 3.0 3.2 2.4 1393 chr3L 19208059 intron fz2 - chr3L 19208756 intron fz2 - chr3L 19209452 intron fz2 - chr3L_10_19205001 chr3L_19205001 RAL-804 1043 chr3L 19210117 19210131 chr3L 19210213 19210227 4 96 0.0 2.5 1.2 1.8 110 chr3L 19210117 intron fz2 - chr3L 19210172 intron fz2 - chr3L 19210227 intron fz2 - chr3L_4_19210001 chr3L_19210001 RAL-804 1044 chr3L 19404974 19404985 chr3L 19405051 19405062 5 77 3.5 1.0 2.2 1.6 88 chr3L 19404974 intron CG32206 - chr3L 19405018 intron CG32206 - chr3L 19405062 intron CG32206 - chr3L_5_19405001 chr3L_19405001 RAL-804 1045 chr3L 19437021 19437051 chr3L 19437105 19437134 5 84 0.5 2.5 1.5 2.0 113 chr3L 19437021 intergenic not near genes chr3L 19437078 intergenic not near genes chr3L 19437134 intergenic not near genes chr3L_5_19435001 chr3L_19435001 RAL-804 1046 chr3L 19493305 19493331 chr3L 19493381 19493407 6 76 2.0 2.0 2.0 2.0 102 chr3L 19493305 intron CG9449 - chr3L 19493356 intron CG9449 - chr3L 19493407 intron CG9449 - chr3L_6_19490001 chr3L_19490001 RAL-804 1047 chr3L 19575186 19575209 chr3L 19575266 19575289 6 79 3.5 0.5 2.0 2.0 103 chr3L 19575186 intron Shal - chr3L 19575238 intron Shal - chr3L 19575289 intron Shal - chr3L_6_19575001 chr3L_19575001 RAL-804 1048 chr3L 19848502 19848522 chr3L 19857692 19857712 roo 5 9190 3.5 7.5 5.5 0.8 9210 chr3L 19848502 intron Papss + chr3L 19853107 intron Papss + chr3L 19857712 intron Papss + chr3L_5_19850001 chr3L_19850001 RAL-804 1049 chr3L 19861821 19861853 chr3L 19863609 19863641 S-element 9 1787 1.5 2.0 1.8 3.2 1820 chr3L 19861821 5` UTR CR45433 + chr3L 19862731 intergenic not near genes chr3L 19863641 intergenic not near genes chr3L_9_19860001 chr3L_19860001 RAL-804 1050 chr3L 19933536 19933555 chr3L 19934358 19934376 6 822 3.5 1.0 2.2 1.9 840 chr3L 19933536 intergenic CR45678 + chr3L 19933956 5` UTR CR45678 + chr3L 19934376 intergenic CR45678 + chr3L_6_19930001 chr3L_19930001 RAL-804 1051 chr3L 19981206 19981225 chr3L 19981286 19981305 7 80 4.0 2.5 3.2 1.7 99 chr3L 19981206 intergenic CG17732 + chr3L 19981256 intergenic CG17732 + chr3L 19981305 intergenic CG17732 + chr3L_7_19980001 chr3L_19980001 RAL-804 1052 chr3L 19992104 19992123 chr3L 19992181 19992200 9 77 5.0 5.5 5.2 1.5 96 chr3L 19992104 intron,intron CG7646 +,Nca + chr3L 19992152 intron,intron CG7646 +,Nca + chr3L 19992200 intron,intron CG7646 +,Nca + chr3L_9_19990001 chr3L_19990001 RAL-804 1053 chr3L 20081756 20081769 chr3L 20081839 20081852 4 82 1.0 6.5 3.8 0.8 96 chr3L 20081756 intron sNPF-R - chr3L 20081804 intron sNPF-R - chr3L 20081852 intron sNPF-R - chr3L_4_20080001 chr3L_20080001 RAL-804 1054 chr3L 20143086 20143115 chr3L 20143166 20143195 10 80 3.5 4.0 3.8 2.1 109 chr3L 20143086 intergenic not near genes chr3L 20143140 intergenic not near genes chr3L 20143195 intergenic not near genes chr3L_10_20140001 chr3L_20140001 RAL-804 1055 chr3L 20150731 20150743 chr3L 20150861 20150874 4 131 2.5 1.0 1.8 1.4 143 chr3L 20150731 3` UTR CG42674 - chr3L 20150802 3` UTR CG42674 - chr3L 20150874 3` UTR CG42674 - chr3L_4_20150001 chr3L_20150001 RAL-804 1056 chr3L 20257354 20257360 chr3L 20258474 20258480 pogo 7 1120 3.0 3.0 3.0 1.8 1126 chr3L 20257354 intron rdgC + chr3L 20257917 intron rdgC + chr3L 20258480 intron rdgC + chr3L_7_20255001 chr3L_20255001 RAL-804 1057 chr3L 20315655 20315681 chr3L 20315729 20315761 9 79 2.0 3.0 2.5 2.6 106 chr3L 20315655 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315708 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315761 3` UTR,intron alphaSnap +,CR43875 - chr3L_9_20315001 chr3L_20315001 RAL-804 1058 chr3L 20317111 20317133 chr3L 20317182 20317191 4 67 5.0 5.5 5.2 0.6 80 chr3L 20317111 3` UTR CR43875 - chr3L 20317151 3` UTR CR43875 - chr3L 20317191 3` UTR,5` UTR CR43875 -,Spn77Ba + chr3L_4_20315001 chr3L_20315001 RAL-804 1059 chr3L 20386939 20386961 chr3L 20387041 20387063 4 102 2.5 2.0 2.2 1.2 124 chr3L 20386939 intron fbl + chr3L 20387001 intron fbl + chr3L 20387063 intron fbl + chr3L_4_20385001 chr3L_20385001 RAL-804 1060 chr3L 20476759 20476785 chr3L 20484358 20484384 springer 4 7599 0.0 0.5 0.2 3.3 7625 chr3L 20476759 3` UTR isoQC + chr3L 20480572 intergenic not near genes chr3L 20484384 3` UTR ZnT77C - chr3L_4_20480001 chr3L_20480001 RAL-804 1061 chr3L 20570021 20570050 chr3L 20570137 20570166 7 115 4.5 3.0 3.8 1.5 145 chr3L 20570021 intergenic not near genes chr3L 20570094 intergenic not near genes chr3L 20570166 intergenic not near genes chr3L_7_20570001 chr3L_20570001 RAL-804 1062 chr3L 20673499 20673527 chr3L 20673580 20673607 13 81 5.0 2.0 3.5 2.9 108 chr3L 20673499 intergenic not near genes chr3L 20673553 intergenic not near genes chr3L 20673607 intergenic not near genes chr3L_13_20670001 chr3L_20670001 RAL-804 1063 chr3L 20849270 20849296 chr3L 20849349 20849375 5 79 1.0 2.0 1.5 2.0 105 chr3L 20849270 intron CG32432 - chr3L 20849322 intron CG32432 - chr3L 20849375 intron CG32432 - chr3L_5_20845001 chr3L_20845001 RAL-804 1064 chr3L 20986767 20986789 chr3L 20986841 20986867 5 77 2.5 4.0 3.2 1.2 100 chr3L 20986767 intergenic not near genes chr3L 20986817 intergenic not near genes chr3L 20986867 intergenic not near genes chr3L_5_20985001 chr3L_20985001 RAL-804 1065 chr3L 21014913 21014948 chr3L 21023394 21023422 Tirant 11 8473 1.5 1.0 1.2 5.0 8509 chr3L 21014913 intron skd - chr3L 21019168 intron skd - chr3L 21023422 intron skd - chr3L_11_21015001 chr3L_21015001 RAL-804 1066 chr3L 21082213 21082236 chr3L 21082291 21082314 6 78 2.0 1.5 1.8 2.1 101 chr3L 21082213 intron ko - chr3L 21082264 intron ko - chr3L 21082314 intron ko - chr3L_6_21080001 chr3L_21080001 RAL-804 1067 chr3L 21151878 21151894 chr3L 21156962 21156978 flea 6 5084 3.0 3.5 3.2 1.4 5100 chr3L 21151878 intron Ac78C - chr3L 21154428 intron Ac78C - chr3L 21156978 intron Ac78C - chr3L_6_21150001 chr3L_21150001 RAL-804 1068 chr3L 21163678 21163707 chr3L 21163797 21163801 8 115 3.0 5.5 4.2 1.5 123 chr3L 21163678 intron Ac78C - chr3L 21163740 intron Ac78C - chr3L 21163801 intron Ac78C - chr3L_8_21160001 chr3L_21160001 RAL-804 1069 chr3L 21163832 21163850 chr3L 21166780 21166798 7 2948 17.5 8.5 13.0 0.5 2966 chr3L 21163832 intron Ac78C - chr3L 21165315 intron Ac78C - chr3L 21166798 intron Ac78C - chr3L_7_21165001 chr3L_21165001 RAL-804 1070 chr3L 21306148 21306179 chr3L 21315307 21315338 roo 4 9159 2.0 0.5 1.2 1.8 9190 chr3L 21306148 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310743 intron Pc - chr3L 21315338 3` UTR Pc - chr3L_4_21310001 chr3L_21310001 RAL-804 1071 chr3L 21319529 21319547 chr3L 21319618 21319637 4 89 3.0 1.0 2.0 1.3 108 chr3L 21319529 5` UTR Rab26 + chr3L 21319583 5` UTR Rab26 + chr3L 21319637 5` UTR Rab26 + chr3L_4_21315001 chr3L_21315001 RAL-804 1072 chr3L 21498840 21498855 chr3L 21500476 21500491 1360 4 1636 5.0 5.0 5.0 0.7 1651 chr3L 21498840 intron Glg1 - chr3L 21499666 intron Glg1 - chr3L 21500491 intron Glg1 - chr3L_4_21495001 chr3L_21495001 RAL-804 1073 chr3L 21771036 21771042 chr3L 21771306 21771312 4 270 2.0 3.5 2.8 1.1 276 chr3L 21771036 intron,3` UTR CG42689 +,CG7370 + chr3L 21771174 intron,3` UTR CG42689 +,CG7370 + chr3L 21771312 intron,3` UTR CG42689 +,CG7370 + chr3L_4_21770001 chr3L_21770001 RAL-804 1074 chr3L 21776674 21776701 chr3L 21776761 21776788 5 87 0.5 2.0 1.2 2.3 114 chr3L 21776674 intron,intron CG42689 +,CG42552 + chr3L 21776731 intron,intron CG42689 +,CG42552 + chr3L 21776788 intron,intron CG42689 +,CG42552 + chr3L_5_21775001 chr3L_21775001 RAL-804 1075 chr3L 22099676 22099707 chr3L 22105862 22105893 3S18 7 6186 3.5 1.5 2.5 2.0 6217 chr3L 22099676 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105893 intergenic not near genes chr3L_7_22100001 chr3L_22100001 RAL-804 1076 chr3L 22122169 22122200 chr3L 22122513 22122544 12 344 2.0 1.5 1.8 4.3 375 chr3L 22122169 5` UTR CR45236 + chr3L 22122356 intergenic CR45236 +,CR45235 + chr3L 22122544 intergenic CR45235 +,CR45236 + chr3L_12_22120001 chr3L_22120001 RAL-804 1077 chr3L 22130506 22130523 chr3L 22130652 22130669 4 146 0.5 3.0 1.8 1.4 163 chr3L 22130506 intergenic not near genes chr3L 22130588 intergenic not near genes chr3L 22130669 intergenic not near genes chr3L_4_22130001 chr3L_22130001 RAL-804 1078 chr3L 22137539 22137552 chr3L 22137615 22137629 5 77 1.5 4.0 2.8 1.3 90 chr3L 22137539 intron olf413 + chr3L 22137584 intron olf413 + chr3L 22137629 intron olf413 + chr3L_5_22135001 chr3L_22135001 RAL-804 1079 chr3L 22225664 22225691 chr3L 22225802 22225829 4 138 3.0 2.5 2.8 1.1 165 chr3L 22225664 intron,3` UTR olf413 +,CR45035 - chr3L 22225746 intron,intron olf413 +,CR45035 - chr3L 22225829 intron,3` UTR olf413 +,CR45035 - chr3L_4_22225001 chr3L_22225001 RAL-804 1080 chr3L 22241313 22241315 chr3L 22241373 22241396 4 73 6.5 1.5 4.0 0.8 83 chr3L 22241313 intron olf413 + chr3L 22241354 intron olf413 + chr3L 22241396 intron olf413 + chr3L_4_22240001 chr3L_22240001 RAL-804 1081 chr3L 22250995 22251023 chr3L 22251090 22251098 6 90 9.5 2.0 5.8 0.9 103 chr3L 22250995 intergenic not near genes chr3L 22251046 intergenic not near genes chr3L 22251098 intergenic not near genes chr3L_6_22250001 chr3L_22250001 RAL-804 1082 chr3L 22333442 22333466 chr3L 22333580 22333604 12 135 1.5 5.0 3.2 2.9 162 chr3L 22333442 intron Ten-m - chr3L 22333523 intron Ten-m - chr3L 22333604 intron Ten-m - chr3L_12_22330001 chr3L_22330001 RAL-804 1083 chr3L 22361940 22361969 chr3L 22362016 22362046 4 77 2.5 1.5 2.0 1.3 106 chr3L 22361940 intron Ten-m - chr3L 22361993 intron Ten-m - chr3L 22362046 intron Ten-m - chr3L_4_22360001 chr3L_22360001 RAL-804 1084 chr3L 22382143 22382174 chr3L 22382229 22382260 11 86 3.5 3.5 3.5 2.4 117 chr3L 22382143 intron Ten-m - chr3L 22382202 intron Ten-m - chr3L 22382260 intron Ten-m - chr3L_11_22380001 chr3L_22380001 RAL-804 1085 chr3L 22413876 22413900 chr3L 22413956 22413984 10 82 1.0 3.5 2.2 3.1 108 chr3L 22413876 intergenic not near genes chr3L 22413930 intergenic not near genes chr3L 22413984 intergenic not near genes chr3L_10_22410001 chr3L_22410001 RAL-804 1086 chr3L 22474605 22474627 chr3L 22474683 22474706 8 77 1.0 4.0 2.5 2.3 101 chr3L 22474605 intergenic CR45382 -,CG11425 + chr3L 22474656 intergenic CG11425 +,CR45382 - chr3L 22474706 intergenic CG11425 +,CR45382 - chr3L_8_22470001 chr3L_22470001 RAL-804 1087 chr3L 22507126 22507138 chr3L 22507213 22507225 4 86 4.5 2.0 3.2 1.0 99 chr3L 22507126 intergenic not near genes chr3L 22507176 intergenic not near genes chr3L 22507225 intergenic not near genes chr3L_4_22505001 chr3L_22505001 RAL-804 1088 chr3L 22507144 22507155 chr3L 22507212 22507241 6 79 2.0 1.5 1.8 2.1 97 chr3L 22507144 intergenic not near genes chr3L 22507192 intergenic not near genes chr3L 22507241 intergenic not near genes chr3L_6_22505001 chr3L_22505001 RAL-804 1089 chr3L 22522700 22522725 chr3L 22522776 22522801 5 77 3.5 0.5 2.0 1.7 101 chr3L 22522700 intergenic not near genes chr3L 22522750 intergenic not near genes chr3L 22522801 intergenic not near genes chr3L_5_22520001 chr3L_22520001 RAL-804 1090 chr3L 22542050 22542083 chr3L 22542141 22542174 11 91 2.0 5.5 3.8 2.3 124 chr3L 22542050 intergenic not near genes chr3L 22542112 intergenic not near genes chr3L 22542174 intergenic not near genes chr3L_11_22540001 chr3L_22540001 RAL-804 1091 chr3L 22545059 22545086 chr3L 22545226 22545253 9 164 0.5 2.0 1.2 4.1 194 chr3L 22545059 intergenic not near genes chr3L 22545156 intergenic not near genes chr3L 22545253 intergenic not near genes chr3L_9_22545001 chr3L_22545001 RAL-804 1092 chr3L 22555770 22555773 chr3L 22563240 22563243 blood 4 7470 5.0 0.0 2.5 1.1 7473 chr3L 22555770 intergenic not near genes chr3L 22559506 intergenic not near genes chr3L 22563243 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-804 1093 chr3L 22555786 22555802 chr3L 22563239 22563272 blood 5 7462 1.5 0.0 0.8 2.8 7486 chr3L 22555786 intergenic not near genes chr3L 22559529 intergenic not near genes chr3L 22563272 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-804 1094 chr3L 22577619 22577630 chr3L 22582407 22582414 Doc 5 4787 3.5 3.5 3.5 1.1 4795 chr3L 22577619 intergenic not near genes chr3L 22580016 intergenic not near genes chr3L 22582414 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-804 1095 chr3L 22577635 22577649 chr3L 22582403 22582437 Doc 7 4785 2.0 3.0 2.5 2.0 4802 chr3L 22577635 intergenic not near genes chr3L 22580036 intergenic not near genes chr3L 22582437 3` UTR CG14459 - chr3L_7_22580001 chr3L_22580001 RAL-804 1096 chr3L 22596020 22596042 chr3L 22596106 22596128 4 85 1.0 1.5 1.2 1.8 108 chr3L 22596020 intron CG14459 - chr3L 22596074 intron CG14459 - chr3L 22596128 intron CG14459 - chr3L_4_22595001 chr3L_22595001 RAL-804 1097 chr3L 22617190 22617221 chr3L 22624642 22624673 blood 12 7451 3.5 1.0 2.2 3.8 7483 chr3L 22617190 intron CG14459 - chr3L 22620932 intron CG14459 - chr3L 22624673 intron CG14459 - chr3L_12_22620001 chr3L_22620001 RAL-804 1098 chr3L 22644842 22644863 chr3L 22645070 22645091 12 228 1.5 1.5 1.5 4.8 249 chr3L 22644842 intergenic CR45381 + chr3L 22644966 intergenic CR45381 + chr3L 22645091 intergenic not near genes chr3L_12_22640001 chr3L_22640001 RAL-804 1099 chr3L 22761388 22761414 chr3L 22766822 22766848 Ivk 4 5434 1.0 3.0 2.0 1.3 5460 chr3L 22761388 intron SPoCk + chr3L 22764118 intron SPoCk + chr3L 22766848 intron SPoCk + chr3L_4_22760001 chr3L_22760001 RAL-804 1100 chr3L 22853697 22853723 chr3L 22853781 22853809 7 85 0.5 1.0 0.8 3.9 112 chr3L 22853697 5` UTR CR43426 + chr3L 22853753 5` UTR CR43426 + chr3L 22853809 5` UTR CR43426 + chr3L_7_22850001 chr3L_22850001 RAL-804 1101 chr3L 22865990 22866003 chr3L 22867123 22867136 Doc 6 1133 4.5 1.5 3.0 1.5 1146 chr3L 22865990 intron CG33170 + chr3L 22866563 intron CG33170 + chr3L 22867136 intron CG33170 + chr3L_6_22865001 chr3L_22865001 RAL-804 1102 chr3L 22897204 22897223 chr3L 22897277 22897302 5 79 3.0 3.0 3.0 1.2 98 chr3L 22897204 intergenic not near genes chr3L 22897253 intergenic not near genes chr3L 22897302 intergenic not near genes chr3L_5_22895001 chr3L_22895001 RAL-804 1103 chr3L 22989862 22989893 chr3L 22996836 22996867 297 6 6973 2.5 1.0 1.8 2.1 7005 chr3L 22989862 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996867 intergenic not near genes chr3L_6_22990001 chr3L_22990001 RAL-804 1104 chr3L 23218053 23218061 chr3L 23218532 23218541 7 479 2.0 2.5 2.2 2.2 488 chr3L 23218053 intron nAChRalpha4 + chr3L 23218297 intron nAChRalpha4 + chr3L 23218541 intron nAChRalpha4 + chr3L_7_23215001 chr3L_23215001 RAL-804 1105 chr3L 23218062 23218072 chr3L 23218527 23218535 5 472 1.0 2.5 1.8 1.8 473 chr3L 23218062 intron nAChRalpha4 + chr3L 23218298 intron nAChRalpha4 + chr3L 23218535 intron nAChRalpha4 + chr3L_5_23215001 chr3L_23215001 RAL-804 1106 chr3L 24008394 24008421 chr3L 24008622 24008650 10 229 5.0 3.0 4.0 2.0 256 chr3L 24008394 intergenic not near genes chr3L 24008522 intergenic not near genes chr3L 24008650 intergenic not near genes chr3L_10_24005001 chr3L_24005001 RAL-804 1107 chr3L 25331643 25331653 chr3L 25331734 25331743 4 90 3.0 5.0 4.0 0.8 100 chr3L 25331643 intergenic not near genes chr3L 25331693 intergenic not near genes chr3L 25331743 intergenic not near genes chr3L_4_25330001 chr3L_25330001 RAL-804 1108 chr3L 25354040 25354074 chr3L 25354222 25354255 5 181 2.5 2.5 2.5 1.4 215 chr3L 25354040 intergenic not near genes chr3L 25354148 intergenic not near genes chr3L 25354255 intergenic not near genes chr3L_5_25350001 chr3L_25350001 RAL-804 1109 chr3L 27390691 27390711 chr3L 27390770 27390784 5 78 23.5 25.0 24.2 0.2 93 chr3L 27390691 intron Dbp80 + chr3L 27390738 intron Dbp80 + chr3L 27390784 intron Dbp80 + chr3L_5_27390001 chr3L_27390001 RAL-804 1110 chr3R 1521177 1521183 chr3R 1521242 1521267 4 70 6.0 7.5 6.8 0.5 90 chr3R 1521177 intergenic not near genes chr3R 1521222 intergenic not near genes chr3R 1521267 intergenic not near genes chr3R_4_1520001 chr3R_1520001 RAL-804 1111 chr3R 2534140 2534147 chr3R 2541709 2541716 4 7568 8.5 15.0 11.8 0.3 7576 chr3R 2534140 intergenic not near genes chr3R 2537928 intergenic not near genes chr3R 2541716 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-804 1112 chr3R 2998463 2998481 chr3R 2998539 2998551 5 74 1.5 0.0 0.8 2.8 88 chr3R 2998463 intron CG42618 - chr3R 2998507 intron CG42618 - chr3R 2998551 intron CG42618 - chr3R_5_2995001 chr3R_2995001 RAL-804 1113 chr3R 3178702 3178711 chr3R 3595186 3595195 5 416484 5.5 16.0 10.8 0.4 416493 chr3R 3178702 intron CG42617 - chr3R 3386948 intergenic not near genes chr3R 3595195 intergenic not near genes chr3R_5_3385001 chr3R_3385001 RAL-804 1114 chr3R 3626038 3626040 chr3R 3626115 3626118 4 78 3.0 8.0 5.5 0.6 80 chr3R 3626038 intron Alg-2 + chr3R 3626078 intron Alg-2 + chr3R 3626118 intron Alg-2 + chr3R_4_3625001 chr3R_3625001 RAL-804 1115 chr3R 4206069 4206098 chr3R 4211644 4211673 mdg3 4 5573 2.5 1.0 1.8 1.4 5604 chr3R 4206069 intron CG14636 - chr3R 4208871 intron CG14636 - chr3R 4211673 intron CG14636 - chr3R_4_4205001 chr3R_4205001 RAL-804 1116 chr3R 4609545 4609580 chr3R 4610709 4610744 1360 9 1164 5.5 3.5 4.5 1.6 1199 chr3R 4609545 intergenic not near genes chr3R 4610144 intergenic not near genes chr3R 4610744 intergenic not near genes chr3R_9_4610001 chr3R_4610001 RAL-804 1117 chr3R 4680707 4680741 chr3R 4680786 4680820 8 79 2.0 2.0 2.0 2.7 113 chr3R 4680707 intron CG43427 + chr3R 4680764 intron CG43427 + chr3R 4680820 5` UTR CG43427 + chr3R_8_4680001 chr3R_4680001 RAL-804 1118 chr3R 4733674 4733704 chr3R 4733798 4733828 8 124 2.0 1.5 1.8 2.9 154 chr3R 4733674 intergenic not near genes chr3R 4733751 intergenic not near genes chr3R 4733828 intergenic not near genes chr3R_8_4730001 chr3R_4730001 RAL-804 1119 chr3R 4753242 4753272 chr3R 4757545 4757571 F-element 12 4302 4.5 2.5 3.5 2.7 4329 chr3R 4753242 intron,intron atms +,CG44098 - chr3R 4755406 intron,intron atms +,CG44098 - chr3R 4757571 intron,exon atms +,CG44098 - chr3R_12_4755001 chr3R_4755001 RAL-804 1120 chr3R 4796111 4796149 chr3R 4796234 4796272 11 122 4.5 2.5 3.5 2.4 161 chr3R 4796111 intron ctrip - chr3R 4796192 intron ctrip - chr3R 4796272 intron ctrip - chr3R_11_4795001 chr3R_4795001 RAL-804 1121 chr3R 4861569 4861594 chr3R 4861650 4861668 6 78 2.0 4.0 3.0 1.5 99 chr3R 4861569 intron opa + chr3R 4861618 intron opa + chr3R 4861668 intron opa + chr3R_6_4860001 chr3R_4860001 RAL-804 1122 chr3R 4922343 4922363 chr3R 4922422 4922441 8 78 3.5 2.0 2.8 2.1 98 chr3R 4922343 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922441 intron Cdep + chr3R_8_4920001 chr3R_4920001 RAL-804 1123 chr3R 4943611 4943622 chr3R 4943716 4943727 8 105 6.0 4.0 5.0 1.3 116 chr3R 4943611 intron Cdep + chr3R 4943669 intron Cdep + chr3R 4943727 intron Cdep + chr3R_8_4940001 chr3R_4940001 RAL-804 1124 chr3R 5045849 5045873 chr3R 5052951 5052976 HMS-Beagle 6 7102 3.0 1.0 2.0 2.0 7127 chr3R 5045849 intron CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052976 intergenic CR45588 - chr3R_6_5045001 chr3R_5045001 RAL-804 1125 chr3R 5067985 5068007 chr3R 5073498 5073524 mdg3 8 5516 2.5 2.0 2.2 2.5 5539 chr3R 5067985 intergenic not near genes chr3R 5070754 intergenic not near genes chr3R 5073524 intergenic not near genes chr3R_8_5070001 chr3R_5070001 RAL-804 1126 chr3R 5236221 5236246 chr3R 5236349 5236374 6 128 2.0 2.5 2.2 1.9 153 chr3R 5236221 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236298 3` UTR rtp - chr3R 5236374 3` UTR rtp - chr3R_6_5235001 chr3R_5235001 RAL-804 1127 chr3R 5250879 5250916 chr3R 5250991 5251026 9 110 2.5 1.0 1.8 3.2 147 chr3R 5250879 intron CG12163 - chr3R 5250952 intron CG12163 - chr3R 5251026 intron CG12163 - chr3R_9_5250001 chr3R_5250001 RAL-804 1128 chr3R 5278088 5278122 chr3R 5278169 5278203 16 81 3.5 4.0 3.8 3.3 115 chr3R 5278088 intron mtd - chr3R 5278146 intron mtd - chr3R 5278203 intron mtd - chr3R_16_5275001 chr3R_5275001 RAL-804 1129 chr3R 5338397 5338429 chr3R 5343574 5343606 Rt1c 12 5176 1.5 3.5 2.5 3.4 5209 chr3R 5338397 intron mtd - chr3R 5341002 intron mtd - chr3R 5343606 intron mtd - chr3R_12_5340001 chr3R_5340001 RAL-804 1130 chr3R 5385978 5386001 chr3R 5386149 5386172 12 171 4.5 6.5 5.5 1.8 194 chr3R 5385978 intron kkv - chr3R 5386075 intron kkv - chr3R 5386172 intron kkv - chr3R_12_5385001 chr3R_5385001 RAL-804 1131 chr3R 5445969 5445992 chr3R 5452429 5452452 Burdock 7 6460 1.0 3.5 2.2 2.2 6483 chr3R 5445969 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452452 intron CG14669 + chr3R_7_5445001 chr3R_5445001 RAL-804 1132 chr3R 5680799 5680819 chr3R 5680882 5680902 4 84 3.0 3.5 3.2 1.0 103 chr3R 5680799 3` UTR Rab23 - chr3R 5680850 3` UTR Rab23 - chr3R 5680902 3` UTR Rab23 - chr3R_4_5680001 chr3R_5680001 RAL-804 1133 chr3R 5688792 5688812 chr3R 5688913 5688932 10 120 2.0 3.5 2.8 2.6 140 chr3R 5688792 intron plx + chr3R 5688862 intron plx + chr3R 5688932 intron plx + chr3R_10_5685001 chr3R_5685001 RAL-804 1134 chr3R 5746016 5746045 chr3R 5746257 5746286 pogo 6 241 2.5 2.5 2.5 1.7 270 chr3R 5746016 3` UTR Madm + chr3R 5746151 3` UTR Madm + chr3R 5746286 3` UTR Madm + chr3R_6_5745001 chr3R_5745001 RAL-804 1135 chr3R 5769232 5769265 chr3R 5769330 5769363 10 98 1.5 1.0 1.2 4.5 131 chr3R 5769232 intron CG2082 - chr3R 5769298 intron CG2082 - chr3R 5769363 intron CG2082 - chr3R_10_5765001 chr3R_5765001 RAL-804 1136 chr3R 5809121 5809140 chr3R 5809371 5809390 pogo 9 250 3.5 1.0 2.2 2.8 269 chr3R 5809121 3` UTR CG11000 + chr3R 5809256 3` UTR CG11000 + chr3R 5809390 3` UTR CG11000 + chr3R_9_5805001 chr3R_5805001 RAL-804 1137 chr3R 5822377 5822409 chr3R 5823544 5823575 1360 11 1167 3.5 3.5 3.5 2.4 1198 chr3R 5822377 3` UTR CG2023 - chr3R 5822976 3` UTR CG2023 - chr3R 5823575 3` UTR CG2023 - chr3R_11_5820001 chr3R_5820001 RAL-804 1138 chr3R 5927560 5927582 chr3R 5927799 5927821 pogo 6 239 3.5 3.5 3.5 1.3 261 chr3R 5927560 intron CG34113 - chr3R 5927690 intron CG34113 - chr3R 5927821 intron CG34113 - chr3R_6_5925001 chr3R_5925001 RAL-804 1139 chr3R 6015965 6015978 chr3R 6024446 6024459 Tirant 5 8480 4.0 2.0 3.0 1.2 8494 chr3R 6015965 intergenic not near genes chr3R 6020212 intergenic not near genes chr3R 6024459 intergenic not near genes chr3R_5_6020001 chr3R_6020001 RAL-804 1140 chr3R 6015985 6015995 chr3R 6024443 6024476 Tirant 5 8476 1.5 2.0 1.8 1.8 8491 chr3R 6015985 intergenic not near genes chr3R 6020230 intergenic not near genes chr3R 6024476 intergenic not near genes chr3R_5_6020001 chr3R_6020001 RAL-804 1141 chr3R 6048443 6048477 chr3R 6048526 6048560 11 83 3.5 3.5 3.5 2.4 117 chr3R 6048443 intergenic not near genes chr3R 6048502 intergenic not near genes chr3R 6048560 intergenic not near genes chr3R_11_6045001 chr3R_6045001 RAL-804 1142 chr3R 6175173 6175204 chr3R 6182445 6182476 HMS-Beagle2 13 7270 1.5 3.0 2.2 4.1 7303 chr3R 6175173 intergenic Osi1 + chr3R 6178824 intron CR45194 + chr3R 6182476 intergenic CR45194 + chr3R_13_6175001 chr3R_6175001 RAL-804 1143 chr3R 6188909 6188924 chr3R 6188986 6188998 6 76 4.5 7.0 5.8 0.9 89 chr3R 6188909 intron NPFR + chr3R 6188954 intron NPFR + chr3R 6188998 5` UTR NPFR + chr3R_6_6185001 chr3R_6185001 RAL-804 1144 chr3R 6191167 6191198 chr3R 6191247 6191277 11 79 1.0 2.5 1.8 3.9 110 chr3R 6191167 intron NPFR + chr3R 6191222 intron NPFR + chr3R 6191277 intron NPFR + chr3R_11_6190001 chr3R_6190001 RAL-804 1145 chr3R 6428813 6428844 chr3R 6428915 6428946 7 102 2.0 2.5 2.2 2.2 133 chr3R 6428813 intron gpp + chr3R 6428880 intron gpp + chr3R 6428946 intron gpp + chr3R_7_6425001 chr3R_6425001 RAL-804 1146 chr3R 6519517 6519554 chr3R 6519593 6519630 11 76 1.5 0.0 0.8 6.1 113 chr3R 6519517 intergenic not near genes chr3R 6519574 intergenic not near genes chr3R 6519630 intergenic not near genes chr3R_11_6515001 chr3R_6515001 RAL-804 1147 chr3R 6526353 6526374 chr3R 6526545 6526566 7 192 0.5 1.0 0.8 3.9 213 chr3R 6526353 intergenic not near genes chr3R 6526460 intergenic not near genes chr3R 6526566 intergenic not near genes chr3R_7_6525001 chr3R_6525001 RAL-804 1148 chr3R 6737505 6737529 chr3R 6739284 6739316 Doc 9 1784 2.5 0.5 1.5 3.6 1811 chr3R 6737505 intron pb - chr3R 6738410 intron pb - chr3R 6739316 intron pb - chr3R_9_6735001 chr3R_6735001 RAL-804 1149 chr3R 6914738 6914769 chr3R 6914839 6914870 15 99 2.5 2.5 2.5 4.3 132 chr3R 6914738 intron Antp - chr3R 6914804 intron Antp - chr3R 6914870 intron Antp - chr3R_15_6910001 chr3R_6910001 RAL-804 1150 chr3R 6961177 6961204 chr3R 6961256 6961283 6 78 2.5 0.5 1.5 2.4 106 chr3R 6961177 intron Antp - chr3R 6961230 intron Antp - chr3R 6961283 intron Antp - chr3R_6_6960001 chr3R_6960001 RAL-804 1151 chr3R 7103283 7103318 chr3R 7103359 7103380 11 71 4.5 3.5 4.0 2.2 97 chr3R 7103283 intron Alh - chr3R 7103332 intron Alh - chr3R 7103380 intron Alh - chr3R_11_7100001 chr3R_7100001 RAL-804 1152 chr3R 7269920 7269940 chr3R 7270014 7270033 4 94 0.5 1.5 1.0 2.0 113 chr3R 7269920 3` UTR Syt4 + chr3R 7269976 3` UTR Syt4 + chr3R 7270033 3` UTR Syt4 + chr3R_4_7265001 chr3R_7265001 RAL-804 1153 chr3R 7335093 7335118 chr3R 7335251 7335276 8 158 3.0 4.5 3.8 1.7 183 chr3R 7335093 intergenic not near genes chr3R 7335184 intergenic not near genes chr3R 7335276 intergenic not near genes chr3R_8_7335001 chr3R_7335001 RAL-804 1154 chr3R 7447992 7448007 chr3R 7448070 7448085 4 78 8.0 3.5 5.8 0.6 93 chr3R 7447992 intergenic not near genes chr3R 7448038 intergenic not near genes chr3R 7448085 intergenic not near genes chr3R_4_7445001 chr3R_7445001 RAL-804 1155 chr3R 7503767 7503797 chr3R 7503882 7503912 7 115 3.5 1.0 2.2 2.2 145 chr3R 7503767 intron alpha-Est9 - chr3R 7503840 intron alpha-Est9 - chr3R 7503912 intron alpha-Est9 - chr3R_7_7500001 chr3R_7500001 RAL-804 1156 chr3R 7548602 7548635 chr3R 7548681 7548714 7 78 0.0 3.5 1.8 2.5 112 chr3R 7548602 intron alpha-Est1 - chr3R 7548658 intron alpha-Est1 - chr3R 7548714 intron alpha-Est1 - chr3R_7_7545001 chr3R_7545001 RAL-804 1157 chr3R 7668856 7668871 chr3R 7668935 7668943 6 77 5.0 2.0 3.5 1.3 87 chr3R 7668856 intron Nlg1 + chr3R 7668900 intron Nlg1 + chr3R 7668943 intron Nlg1 + chr3R_6_7665001 chr3R_7665001 RAL-804 1158 chr3R 7668878 7668886 chr3R 7668929 7668965 6 74 3.0 2.0 2.5 1.7 87 chr3R 7668878 intron Nlg1 + chr3R 7668922 intron Nlg1 + chr3R 7668965 intron Nlg1 + chr3R_6_7665001 chr3R_7665001 RAL-804 1159 chr3R 7677915 7677941 chr3R 7678028 7678054 7 113 0.0 0.0 0.0 7.0 139 chr3R 7677915 intron Nlg1 + chr3R 7677984 intron Nlg1 + chr3R 7678054 intron Nlg1 + chr3R_7_7675001 chr3R_7675001 RAL-804 1160 chr3R 7682271 7682299 chr3R 7682359 7682386 16 86 2.0 4.0 3.0 4.0 115 chr3R 7682271 intron Nlg1 + chr3R 7682328 intron Nlg1 + chr3R 7682386 intron Nlg1 + chr3R_16_7680001 chr3R_7680001 RAL-804 1161 chr3R 7687798 7687830 chr3R 7687881 7687914 7 83 4.0 3.0 3.5 1.6 116 chr3R 7687798 intron Nlg1 + chr3R 7687856 intron Nlg1 + chr3R 7687914 intron Nlg1 + chr3R_7_7685001 chr3R_7685001 RAL-804 1162 chr3R 7690349 7690378 chr3R 7690427 7690458 5 79 4.0 2.0 3.0 1.2 109 chr3R 7690349 intron Nlg1 + chr3R 7690404 intron Nlg1 + chr3R 7690458 intron Nlg1 + chr3R_5_7690001 chr3R_7690001 RAL-804 1163 chr3R 7726157 7726188 chr3R 7726233 7726263 11 75 5.0 3.0 4.0 2.2 106 chr3R 7726157 intergenic not near genes chr3R 7726210 intergenic not near genes chr3R 7726263 intergenic not near genes chr3R_11_7725001 chr3R_7725001 RAL-804 1164 chr3R 7729466 7729496 chr3R 7737404 7737434 Stalker2 7 7937 2.0 3.0 2.5 2.0 7968 chr3R 7729466 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737434 intergenic not near genes chr3R_7_7730001 chr3R_7730001 RAL-804 1165 chr3R 7821714 7821737 chr3R 7821810 7821833 9 96 4.5 6.0 5.2 1.5 119 chr3R 7821714 intron CG34384 + chr3R 7821774 intron CG34384 + chr3R 7821833 intron CG34384 + chr3R_9_7820001 chr3R_7820001 RAL-804 1166 chr3R 7849657 7849671 chr3R 7850824 7850838 1360 5 1166 2.5 5.0 3.8 1.0 1181 chr3R 7849657 intron CG34384 + chr3R 7850248 intron CG34384 + chr3R 7850838 intron CG34384 + chr3R_5_7850001 chr3R_7850001 RAL-804 1167 chr3R 7964533 7964553 chr3R 7964620 7964641 6 88 2.5 0.5 1.5 2.4 108 chr3R 7964533 intron dsx - chr3R 7964587 intron dsx - chr3R 7964641 intron dsx - chr3R_6_7960001 chr3R_7960001 RAL-804 1168 chr3R 7965309 7965336 chr3R 7965397 7965424 9 87 2.5 0.5 1.5 3.6 115 chr3R 7965309 intron dsx - chr3R 7965366 intron dsx - chr3R 7965424 intron dsx - chr3R_9_7965001 chr3R_7965001 RAL-804 1169 chr3R 8049049 8049058 chr3R 8049623 8049632 5 574 8.0 2.0 5.0 0.8 583 chr3R 8049049 intron CG43060 + chr3R 8049340 intron,intron CG43060 +,CG43618 + chr3R 8049632 intron CG43060 + chr3R_5_8045001 chr3R_8045001 RAL-804 1170 chr3R 8094411 8094441 chr3R 8099716 8099743 Transpac 9 5305 3.0 4.0 3.5 2.0 5332 chr3R 8094411 intron CG7900 + chr3R 8097077 intron CG7900 + chr3R 8099743 intron CG7900 + chr3R_9_8095001 chr3R_8095001 RAL-804 1171 chr3R 8107387 8107417 chr3R 8107521 8107551 4 134 3.0 1.5 2.2 1.2 164 chr3R 8107387 intron puc + chr3R 8107469 intron puc + chr3R 8107551 intron puc + chr3R_4_8105001 chr3R_8105001 RAL-804 1172 chr3R 8393595 8393605 chr3R 8393679 8393688 4 84 2.0 3.5 2.8 1.1 93 chr3R 8393595 intron CG45263 - chr3R 8393642 intron CG45263 - chr3R 8393688 intron CG45263 - chr3R_4_8390001 chr3R_8390001 RAL-804 1173 chr3R 8403009 8403036 chr3R 8412175 8412202 roo 11 9165 4.0 3.0 3.5 2.4 9193 chr3R 8403009 intron CG45263 - chr3R 8407606 intron CG45263 - chr3R 8412202 intron CG45263 - chr3R_11_8405001 chr3R_8405001 RAL-804 1174 chr3R 8472022 8472052 chr3R 8472374 8472405 6 352 2.5 1.5 2.0 2.0 383 chr3R 8472022 intron CG45263 - chr3R 8472214 intron CG45263 - chr3R 8472405 intron CG45263 - chr3R_6_8470001 chr3R_8470001 RAL-804 1175 chr3R 8547165 8547181 chr3R 8547444 8547463 5 281 6.0 2.0 4.0 1.0 298 chr3R 8547165 5` UTR CR45574 + chr3R 8547314 5` UTR CR45574 + chr3R 8547463 intergenic CR45574 + chr3R_5_8545001 chr3R_8545001 RAL-804 1176 chr3R 8552370 8552385 chr3R 8552450 8552457 4 78 5.5 5.5 5.5 0.6 87 chr3R 8552370 intergenic Or85d + chr3R 8552414 intergenic Or85d + chr3R 8552457 intergenic Or85d + chr3R_4_8550001 chr3R_8550001 RAL-804 1177 chr3R 8563570 8563596 chr3R 8563681 8563707 5 109 2.0 1.0 1.5 2.0 137 chr3R 8563570 3` UTR CR44291 - chr3R 8563638 3` UTR CR44291 - chr3R 8563707 3` UTR CR44291 - chr3R_5_8560001 chr3R_8560001 RAL-804 1178 chr3R 8570477 8570497 chr3R 8575112 8575133 HMS-Beagle 8 4636 2.5 1.0 1.8 2.9 4656 chr3R 8570477 intergenic not near genes chr3R 8572805 intergenic not near genes chr3R 8575133 intergenic not near genes chr3R_8_8570001 chr3R_8570001 RAL-804 1179 chr3R 8601776 8601781 chr3R 8610926 8610934 roo 4 9152 4.5 4.0 4.2 0.8 9158 chr3R 8601776 intron 5-HT2B + chr3R 8606355 intron 5-HT2B + chr3R 8610934 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-804 1180 chr3R 8601782 8601798 chr3R 8610917 8610950 roo 9 9151 2.5 3.0 2.8 2.4 9168 chr3R 8601782 intron 5-HT2B + chr3R 8606366 intron 5-HT2B + chr3R 8610950 intron 5-HT2B + chr3R_9_8605001 chr3R_8605001 RAL-804 1181 chr3R 8671403 8671436 chr3R 8671487 8671520 5 84 1.5 1.5 1.5 2.0 117 chr3R 8671403 intron CG8036 + chr3R 8671462 intron CG8036 + chr3R 8671520 intron CG8036 + chr3R_5_8670001 chr3R_8670001 RAL-804 1182 chr3R 8688078 8688113 chr3R 8688165 8688200 6 87 1.0 2.5 1.8 2.1 122 chr3R 8688078 intergenic not near genes chr3R 8688139 intergenic not near genes chr3R 8688200 intergenic not near genes chr3R_6_8685001 chr3R_8685001 RAL-804 1183 chr3R 8707363 8707384 chr3R 8709803 8709825 jockey 10 2441 4.0 4.0 4.0 2.0 2462 chr3R 8707363 intergenic not near genes chr3R 8708594 intergenic not near genes chr3R 8709825 intergenic not near genes chr3R_10_8705001 chr3R_8705001 RAL-804 1184 chr3R 8740251 8740269 chr3R 8740340 8740358 7 89 3.0 5.5 4.2 1.3 107 chr3R 8740251 intron CG9801 - chr3R 8740304 intron CG9801 - chr3R 8740358 intron CG9801 - chr3R_7_8740001 chr3R_8740001 RAL-804 1185 chr3R 8743184 8743221 chr3R 8743266 8743295 13 78 3.0 0.5 1.8 4.6 111 chr3R 8743184 intron CG9801 - chr3R 8743240 intron CG9801 - chr3R 8743295 intron CG9801 - chr3R_13_8740001 chr3R_8740001 RAL-804 1186 chr3R 8745748 8745780 chr3R 8745859 8745891 4 111 1.0 1.5 1.2 1.8 143 chr3R 8745748 intron CG9801 - chr3R 8745820 intron CG9801 - chr3R 8745891 intron CG9801 - chr3R_4_8745001 chr3R_8745001 RAL-804 1187 chr3R 8894877 8894902 chr3R 8896033 8896055 1360 6 1155 1.0 2.0 1.5 2.4 1178 chr3R 8894877 intron pyd - chr3R 8895466 intron pyd - chr3R 8896055 intron pyd - chr3R_6_8895001 chr3R_8895001 RAL-804 1188 chr3R 8959192 8959215 chr3R 8960507 8960529 7 1314 3.0 1.0 2.0 2.3 1337 chr3R 8959192 intron CG11966 - chr3R 8959860 intron CG11966 - chr3R 8960529 intron CG11966 - chr3R_7_8955001 chr3R_8955001 RAL-804 1189 chr3R 8960576 8960611 chr3R 8960699 8960734 12 123 0.0 1.5 0.8 6.7 158 chr3R 8960576 intron CG11966 - chr3R 8960655 intron CG11966 - chr3R 8960734 intron CG11966 - chr3R_12_8960001 chr3R_8960001 RAL-804 1190 chr3R 8997375 8997396 chr3R 8997465 8997486 10 88 2.5 4.0 3.2 2.4 111 chr3R 8997375 intron CG31100 - chr3R 8997430 intron CG31100 - chr3R 8997486 intron CG31100 - chr3R_10_8995001 chr3R_8995001 RAL-804 1191 chr3R 9083141 9083172 chr3R 9083226 9083257 15 83 1.0 3.0 2.0 5.0 116 chr3R 9083141 intron pum - chr3R 9083199 intron pum - chr3R 9083257 intron pum - chr3R_15_9080001 chr3R_9080001 RAL-804 1192 chr3R 9108865 9108875 chr3R 9108941 9108951 4 76 3.5 1.0 2.2 1.2 86 chr3R 9108865 intron pum - chr3R 9108908 intron pum - chr3R 9108951 intron pum - chr3R_4_9105001 chr3R_9105001 RAL-804 1193 chr3R 9149445 9149463 chr3R 9149525 9149543 5 80 2.0 2.0 2.0 1.7 98 chr3R 9149445 intron pum - chr3R 9149494 intron pum - chr3R 9149543 intron pum - chr3R_5_9145001 chr3R_9145001 RAL-804 1194 chr3R 9319580 9319595 chr3R 9320015 9320030 jockey 5 435 3.0 2.0 2.5 1.4 450 chr3R 9319580 intron CG8861 - chr3R 9319805 intron CG8861 - chr3R 9320030 intron CG8861 - chr3R_5_9315001 chr3R_9315001 RAL-804 1195 chr3R 9319601 9319609 chr3R 9320007 9320044 jockey 4 428 2.5 1.5 2.0 1.3 443 chr3R 9319601 intron CG8861 - chr3R 9319822 intron CG8861 - chr3R 9320044 intron CG8861 - chr3R_4_9315001 chr3R_9315001 RAL-804 1196 chr3R 9362989 9363007 chr3R 9363078 9363096 5 89 2.5 0.5 1.5 2.0 107 chr3R 9362989 3` UTR CG45050 + chr3R 9363042 intergenic CG45050 +,CG18473 + chr3R 9363096 intergenic CG45050 +,CG18473 + chr3R_5_9360001 chr3R_9360001 RAL-804 1197 chr3R 9382822 9382847 chr3R 9382947 9382972 9 125 3.5 1.5 2.5 2.6 150 chr3R 9382822 intron FER - chr3R 9382897 intron FER - chr3R 9382972 intron FER - chr3R_9_9380001 chr3R_9380001 RAL-804 1198 chr3R 9398066 9398102 chr3R 9400037 9400071 17 1970 23.0 20.5 21.8 0.7 2005 chr3R 9398066 intergenic Or85f + chr3R 9399068 exon Or85f + chr3R 9400071 intergenic CG34117 -,RpL34b - chr3R_17_9395001 chr3R_9395001 RAL-804 1199 chr3R 9599811 9599841 chr3R 9599985 9600015 6 172 0.5 2.5 1.5 2.4 204 chr3R 9599811 intron CG8312 + chr3R 9599913 intron CG8312 + chr3R 9600015 intron CG8312 + chr3R_6_9595001 chr3R_9595001 RAL-804 1200 chr3R 9702278 9702292 chr3R 9702354 9702354 6 73 3.0 4.0 3.5 1.3 76 chr3R 9702278 intron Unc-115a - chr3R 9702316 intron Unc-115a - chr3R 9702354 intron Unc-115a - chr3R_6_9700001 chr3R_9700001 RAL-804 1201 chr3R 9898791 9898815 chr3R 9898882 9898906 9 91 3.5 4.0 3.8 1.9 115 chr3R 9898791 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898906 intron Glut4EF + chr3R_9_9895001 chr3R_9895001 RAL-804 1202 chr3R 10073770 10073803 chr3R 10073879 10073912 9 109 1.0 2.0 1.5 3.6 142 chr3R 10073770 intergenic nerfin-2 +,CG5361 - chr3R 10073841 3` UTR CG5361 - chr3R 10073912 exon CG5361 - chr3R_9_10070001 chr3R_10070001 RAL-804 1203 chr3R 10192286 10192302 chr3R 10192472 10192488 7 186 1.0 4.0 2.5 2.0 202 chr3R 10192286 intron Syn + chr3R 10192387 intron Syn + chr3R 10192488 intron Syn + chr3R_7_10190001 chr3R_10190001 RAL-804 1204 chr3R 10231784 10231814 chr3R 10237361 10237391 mdg3 4 5577 0.5 1.5 1.0 2.0 5607 chr3R 10231784 intron CG42795 + chr3R 10234588 intron CG42795 + chr3R 10237391 intron CG42795 + chr3R_4_10230001 chr3R_10230001 RAL-804 1205 chr3R 10512365 10512377 chr3R 10512471 10512484 4 107 4.5 3.5 4.0 0.8 119 chr3R 10512365 intron hth - chr3R 10512424 intron hth - chr3R 10512484 intron hth - chr3R_4_10510001 chr3R_10510001 RAL-804 1206 chr3R 10531871 10531890 chr3R 10531952 10531971 10 81 2.5 0.0 1.2 4.5 100 chr3R 10531871 intron hth - chr3R 10531921 intron hth - chr3R 10531971 intron hth - chr3R_10_10530001 chr3R_10530001 RAL-804 1207 chr3R 10563457 10563490 chr3R 10563555 10563588 7 95 5.0 4.0 4.5 1.3 131 chr3R 10563457 intron hth - chr3R 10563522 intron hth - chr3R 10563588 intron hth - chr3R_7_10560001 chr3R_10560001 RAL-804 1208 chr3R 10651810 10651828 chr3R 10651909 10651927 4 98 6.0 2.5 4.2 0.8 117 chr3R 10651810 intergenic not near genes chr3R 10651868 intergenic not near genes chr3R 10651927 intergenic not near genes chr3R_4_10650001 chr3R_10650001 RAL-804 1209 chr3R 10723768 10723795 chr3R 10723860 10723887 6 91 3.5 0.5 2.0 2.0 119 chr3R 10723768 intergenic not near genes chr3R 10723828 intergenic not near genes chr3R 10723887 intergenic not near genes chr3R_6_10720001 chr3R_10720001 RAL-804 1210 chr3R 10727642 10727679 chr3R 10727721 10727757 14 78 4.5 2.0 3.2 3.3 115 chr3R 10727642 intergenic not near genes chr3R 10727700 intergenic not near genes chr3R 10727757 intergenic not near genes chr3R_14_10725001 chr3R_10725001 RAL-804 1211 chr3R 10745434 10745452 chr3R 10745521 10745539 5 86 3.5 3.5 3.5 1.1 105 chr3R 10745434 intron TkR86C - chr3R 10745486 intron TkR86C - chr3R 10745539 intron TkR86C - chr3R_5_10745001 chr3R_10745001 RAL-804 1212 chr3R 10804186 10804207 chr3R 10811718 10811737 17.6 4 7531 0.0 3.0 1.5 1.6 7551 chr3R 10804186 intergenic CG14692 - chr3R 10807962 intergenic not near genes chr3R 10811737 3` UTR CG14693 - chr3R_4_10805001 chr3R_10805001 RAL-804 1213 chr3R 10920044 10920072 chr3R 10920122 10920150 7 78 1.0 4.0 2.5 2.0 106 chr3R 10920044 intergenic not near genes chr3R 10920097 intergenic not near genes chr3R 10920150 intergenic not near genes chr3R_7_10920001 chr3R_10920001 RAL-804 1214 chr3R 11155047 11155068 chr3R 11155125 11155146 8 78 1.5 1.5 1.5 3.2 99 chr3R 11155047 intron Ugt86Dc + chr3R 11155096 intron Ugt86Dc + chr3R 11155146 intron Ugt86Dc + chr3R_8_11155001 chr3R_11155001 RAL-804 1215 chr3R 11379238 11379249 chr3R 11388393 11388404 roo 4 9155 4.0 2.5 3.2 1.0 9166 chr3R 11379238 intron pros + chr3R 11383821 intron pros + chr3R 11388404 intron pros + chr3R_4_11380001 chr3R_11380001 RAL-804 1216 chr3R 11518817 11518846 chr3R 11518907 11518934 13 90 3.0 3.5 3.2 3.1 117 chr3R 11518817 intergenic not near genes chr3R 11518876 intergenic not near genes chr3R 11518934 intergenic not near genes chr3R_13_11515001 chr3R_11515001 RAL-804 1217 chr3R 11570389 11570418 chr3R 11570471 11570499 8 82 2.0 1.0 1.5 3.2 110 chr3R 11570389 intron Mrp4 + chr3R 11570444 intron Mrp4 + chr3R 11570499 intron Mrp4 + chr3R_8_11570001 chr3R_11570001 RAL-804 1218 chr3R 11694724 11694751 chr3R 11694817 11694844 4 93 1.0 1.5 1.2 1.8 120 chr3R 11694724 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694844 intergenic not near genes chr3R_4_11690001 chr3R_11690001 RAL-804 1219 chr3R 11734168 11734181 chr3R 11734287 11734299 6 118 3.0 2.5 2.8 1.6 131 chr3R 11734168 intergenic not near genes chr3R 11734234 intergenic not near genes chr3R 11734299 intergenic not near genes chr3R_6_11730001 chr3R_11730001 RAL-804 1220 chr3R 11757756 11757761 chr3R 11757840 11757862 4 92 4.5 3.0 3.8 0.8 106 chr3R 11757756 intron Lk6 - chr3R 11757809 intron Lk6 - chr3R 11757862 intron Lk6 - chr3R_4_11755001 chr3R_11755001 RAL-804 1221 chr3R 11841067 11841096 chr3R 11846258 11846284 BS 8 5186 4.5 4.0 4.2 1.5 5217 chr3R 11841067 intron CG6959 - chr3R 11843676 intron CG6959 - chr3R 11846284 intron CG6959 - chr3R_8_11840001 chr3R_11840001 RAL-804 1222 chr3R 11850318 11850343 chr3R 11850397 11850422 5 79 3.5 1.5 2.5 1.4 104 chr3R 11850318 intron CG6959 - chr3R 11850370 intron CG6959 - chr3R 11850422 intron CG6959 - chr3R_5_11850001 chr3R_11850001 RAL-804 1223 chr3R 12022886 12022905 chr3R 12025063 12025082 pogo 8 2176 3.0 3.0 3.0 2.0 2196 chr3R 12022886 intergenic not near genes chr3R 12023984 intergenic not near genes chr3R 12025082 intergenic not near genes chr3R_8_12020001 chr3R_12020001 RAL-804 1224 chr3R 12036046 12036059 chr3R 12036128 12036142 5 82 3.0 0.5 1.8 1.8 96 chr3R 12036046 intergenic not near genes chr3R 12036094 intergenic not near genes chr3R 12036142 intergenic not near genes chr3R_5_12035001 chr3R_12035001 RAL-804 1225 chr3R 12037333 12037345 chr3R 12037591 12037604 5 259 0.0 4.0 2.0 1.7 271 chr3R 12037333 intergenic not near genes chr3R 12037468 intergenic not near genes chr3R 12037604 intergenic not near genes chr3R_5_12035001 chr3R_12035001 RAL-804 1226 chr3R 12080866 12080894 chr3R 12080942 12080948 5 68 4.5 3.5 4.0 1.0 82 chr3R 12080866 intron CG14741 - chr3R 12080907 intron CG14741 - chr3R 12080948 intron CG14741 - chr3R_5_12080001 chr3R_12080001 RAL-804 1227 chr3R 12097246 12097264 chr3R 12097350 12097368 4 104 2.0 4.0 3.0 1.0 122 chr3R 12097246 intron dpr17 + chr3R 12097307 intron dpr17 + chr3R 12097368 intron dpr17 + chr3R_4_12095001 chr3R_12095001 RAL-804 1228 chr3R 12111892 12111923 chr3R 12111968 12111999 13 75 2.0 1.5 1.8 4.6 107 chr3R 12111892 intergenic dpr17 + chr3R 12111946 intergenic not near genes chr3R 12111999 intergenic not near genes chr3R_13_12110001 chr3R_12110001 RAL-804 1229 chr3R 12116343 12116377 chr3R 12116523 12116558 15 179 2.5 2.0 2.2 4.7 215 chr3R 12116343 intergenic not near genes chr3R 12116450 intergenic not near genes chr3R 12116558 intergenic not near genes chr3R_15_12115001 chr3R_12115001 RAL-804 1230 chr3R 12117525 12117542 chr3R 12117914 12117931 4 387 2.0 4.5 3.2 1.0 406 chr3R 12117525 intergenic not near genes chr3R 12117728 intergenic not near genes chr3R 12117931 intergenic not near genes chr3R_4_12115001 chr3R_12115001 RAL-804 1231 chr3R 12119873 12119906 chr3R 12119972 12119983 6 88 2.5 1.0 1.8 2.1 110 chr3R 12119873 intergenic not near genes chr3R 12119928 intergenic not near genes chr3R 12119983 intergenic not near genes chr3R_6_12115001 chr3R_12115001 RAL-804 1232 chr3R 12202292 12202315 chr3R 12202400 12202424 9 108 2.5 4.5 3.5 2.0 132 chr3R 12202292 intergenic not near genes chr3R 12202358 intergenic not near genes chr3R 12202424 intergenic not near genes chr3R_9_12200001 chr3R_12200001 RAL-804 1233 chr3R 12215014 12215039 chr3R 12215136 12215161 8 122 3.0 4.0 3.5 1.8 147 chr3R 12215014 3` UTR,intron CG4848 -,CG14742 + chr3R 12215088 3` UTR,intron CG4848 -,CG14742 + chr3R 12215161 3` UTR,intron CG4848 -,CG14742 + chr3R_8_12215001 chr3R_12215001 RAL-804 1234 chr3R 12365199 12365231 chr3R 12365405 12365431 13 205 1.5 4.5 3.0 3.2 232 chr3R 12365199 exon GstD10 - chr3R 12365315 exon GstD10 - chr3R 12365431 exon GstD10 - chr3R_13_12365001 chr3R_12365001 RAL-804 1235 chr3R 12524130 12524156 chr3R 12524210 12524235 10 79 2.5 1.0 1.8 3.6 105 chr3R 12524130 intron Octbeta3R - chr3R 12524182 intron Octbeta3R - chr3R 12524235 intron Octbeta3R - chr3R_10_12520001 chr3R_12520001 RAL-804 1236 chr3R 12546458 12546483 chr3R 12546541 12546566 9 83 3.5 2.0 2.8 2.4 108 chr3R 12546458 intron Octbeta3R - chr3R 12546512 intron Octbeta3R - chr3R 12546566 intron Octbeta3R - chr3R_9_12545001 chr3R_12545001 RAL-804 1237 chr3R 12582806 12582828 chr3R 12582899 12582916 5 91 2.5 0.5 1.5 2.0 110 chr3R 12582806 intron Octbeta2R - chr3R 12582861 intron Octbeta2R - chr3R 12582916 intron Octbeta2R - chr3R_5_12580001 chr3R_12580001 RAL-804 1238 chr3R 12733483 12733508 chr3R 12733560 12733585 4 76 2.5 8.0 5.2 0.6 102 chr3R 12733483 intergenic not near genes chr3R 12733534 intergenic not near genes chr3R 12733585 intergenic not near genes chr3R_4_12730001 chr3R_12730001 RAL-804 1239 chr3R 12810054 12810084 chr3R 12810130 12810161 11 74 4.5 3.5 4.0 2.2 107 chr3R 12810054 intergenic not near genes chr3R 12810108 intergenic not near genes chr3R 12810161 intergenic not near genes chr3R_11_12810001 chr3R_12810001 RAL-804 1240 chr3R 12920167 12920179 chr3R 12925370 12925382 copia 5 5202 2.0 6.0 4.0 1.0 5215 chr3R 12920167 intron beat-Vb + chr3R 12922774 intron beat-Vb + chr3R 12925382 intron beat-Vb + chr3R_5_12920001 chr3R_12920001 RAL-804 1241 chr3R 12954805 12954833 chr3R 12954910 12954938 11 104 4.5 2.5 3.5 2.4 133 chr3R 12954805 intron grsm - chr3R 12954872 intron grsm - chr3R 12954938 intron grsm - chr3R_11_12950001 chr3R_12950001 RAL-804 1242 chr3R 12972559 12972577 chr3R 12972698 12972716 11 139 2.0 2.5 2.2 3.4 157 chr3R 12972559 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972716 intron CG7381 - chr3R_11_12970001 chr3R_12970001 RAL-804 1243 chr3R 13027013 13027037 chr3R 13027094 13027118 4 81 1.5 1.5 1.5 1.6 105 chr3R 13027013 3` UTR CG12360 - chr3R 13027066 3` UTR CG12360 - chr3R 13027118 3` UTR CG12360 - chr3R_4_13025001 chr3R_13025001 RAL-804 1244 chr3R 13059966 13059974 chr3R 13060161 13060169 4 195 2.0 3.5 2.8 1.1 203 chr3R 13059966 intron sim + chr3R 13060068 intron sim + chr3R 13060169 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-804 1245 chr3R 13067006 13067177 chr3R 13067093 13067288 8 105 1.5 2.0 1.8 2.9 282 chr3R 13067006 intron sim + chr3R 13067147 intron sim + chr3R 13067288 intron sim + chr3R_8_13065001 chr3R_13065001 RAL-804 1246 chr3R 13073976 13074004 chr3R 13074055 13074083 11 79 4.0 2.0 3.0 2.8 107 chr3R 13073976 intron sim + chr3R 13074030 intron sim + chr3R 13074083 exon sim + chr3R_11_13070001 chr3R_13070001 RAL-804 1247 chr3R 13075358 13075371 chr3R 13075439 13075452 6 81 4.5 1.0 2.8 1.6 94 chr3R 13075358 intron sim + chr3R 13075405 intron sim + chr3R 13075452 intron sim + chr3R_6_13075001 chr3R_13075001 RAL-804 1248 chr3R 13120770 13120798 chr3R 13120847 13120873 14 77 1.5 2.5 2.0 4.7 103 chr3R 13120770 intron timeout + chr3R 13120822 intron timeout + chr3R 13120873 intron timeout + chr3R_14_13120001 chr3R_13120001 RAL-804 1249 chr3R 13143035 13143066 chr3R 13148612 13148642 mdg3 9 5575 3.0 5.5 4.2 1.7 5607 chr3R 13143035 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145838 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148642 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 RAL-804 1250 chr3R 13174539 13174571 chr3R 13174646 13174678 11 106 2.5 2.5 2.5 3.1 139 chr3R 13174539 intergenic not near genes chr3R 13174608 intergenic not near genes chr3R 13174678 intergenic not near genes chr3R_11_13170001 chr3R_13170001 RAL-804 1251 chr3R 13195958 13195984 chr3R 13196052 13196079 13 95 3.0 1.0 2.0 4.3 121 chr3R 13195958 intergenic not near genes chr3R 13196018 intergenic not near genes chr3R 13196079 intergenic not near genes chr3R_13_13195001 chr3R_13195001 RAL-804 1252 chr3R 13197174 13197195 chr3R 13198454 13198475 6 1280 11.0 9.0 10.0 0.5 1301 chr3R 13197174 intergenic not near genes chr3R 13197824 intergenic not near genes chr3R 13198475 intergenic not near genes chr3R_6_13195001 chr3R_13195001 RAL-804 1253 chr3R 13197030 13197047 chr3R 13198500 13198517 7 1470 14.5 8.0 11.2 0.6 1487 chr3R 13197030 intergenic not near genes chr3R 13197774 intergenic not near genes chr3R 13198517 intergenic not near genes chr3R_7_13195001 chr3R_13195001 RAL-804 1254 chr3R 13205411 13205443 chr3R 13205492 13205502 13 78 1.0 4.0 2.5 3.7 91 chr3R 13205411 intergenic not near genes chr3R 13205456 intergenic not near genes chr3R 13205502 intergenic not near genes chr3R_13_13205001 chr3R_13205001 RAL-804 1255 chr3R 13248656 13248671 chr3R 13248755 13248770 6 99 1.5 0.5 1.0 3.0 114 chr3R 13248656 intron Ace - chr3R 13248713 intron Ace - chr3R 13248770 intron Ace - chr3R_6_13245001 chr3R_13245001 RAL-804 1256 chr3R 13274210 13274247 chr3R 13274289 13274326 7 78 2.5 1.5 2.0 2.3 116 chr3R 13274210 intergenic not near genes chr3R 13274268 intergenic not near genes chr3R 13274326 intergenic not near genes chr3R_7_13270001 chr3R_13270001 RAL-804 1257 chr3R 13439584 13439601 chr3R 13439664 13439683 7 82 2.0 1.0 1.5 2.8 99 chr3R 13439584 intergenic CR42756 - chr3R 13439634 intergenic CR42756 - chr3R 13439683 intergenic CR42756 - chr3R_7_13435001 chr3R_13435001 RAL-804 1258 chr3R 13484334 13484364 chr3R 13484413 13484445 11 81 3.0 1.0 2.0 3.7 111 chr3R 13484334 intergenic not near genes chr3R 13484390 intergenic not near genes chr3R 13484445 intergenic not near genes chr3R_11_13480001 chr3R_13480001 RAL-804 1259 chr3R 13496634 13496641 chr3R 13496712 13496720 5 79 5.5 0.0 2.8 1.3 86 chr3R 13496634 intergenic not near genes chr3R 13496677 intergenic not near genes chr3R 13496720 intergenic not near genes chr3R_5_13495001 chr3R_13495001 RAL-804 1260 chr3R 13571847 13571860 chr3R 13571922 13571937 5 76 2.5 3.5 3.0 1.2 90 chr3R 13571847 intergenic not near genes chr3R 13571892 intergenic not near genes chr3R 13571937 intergenic not near genes chr3R_5_13570001 chr3R_13570001 RAL-804 1261 chr3R 13659719 13659845 chr3R 13659825 13659934 7 101 0.0 0.0 0.0 7.0 215 chr3R 13659719 intron Hrb87F - chr3R 13659826 intron Hrb87F - chr3R 13659934 intron Hrb87F - chr3R_7_13655001 chr3R_13655001 RAL-804 1262 chr3R 13693028 13693028 chr3R 21907534 21907535 5 8214507 7.5 14.5 11.0 0.4 8214507 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907535 intergenic CG6678 + chr3R_5_17800001 chr3R_17800001 RAL-804 1263 chr3R 13773051 13773086 chr3R 13773169 13773203 11 118 1.0 1.5 1.2 5.0 152 chr3R 13773051 intron CG9297 + chr3R 13773127 intron CG9297 + chr3R 13773203 intron CG9297 + chr3R_11_13770001 chr3R_13770001 RAL-804 1264 chr3R 13803898 13803905 chr3R 13804119 13804126 6 221 0.0 0.0 0.0 6.0 228 chr3R 13803898 intergenic not near genes chr3R 13804012 intergenic not near genes chr3R 13804126 intergenic not near genes chr3R_6_13800001 chr3R_13800001 RAL-804 1265 chr3R 13835612 13835623 chr3R 13835704 13835715 8 92 0.0 7.0 3.5 1.8 103 chr3R 13835612 intron Nsf2 - chr3R 13835664 intron Nsf2 - chr3R 13835715 intron Nsf2 - chr3R_8_13835001 chr3R_13835001 RAL-804 1266 chr3R 13846174 13846202 chr3R 13846272 13846300 8 96 4.0 1.5 2.8 2.1 126 chr3R 13846174 intergenic not near genes chr3R 13846237 intergenic not near genes chr3R 13846300 intergenic not near genes chr3R_8_13845001 chr3R_13845001 RAL-804 1267 chr3R 13863682 13863713 chr3R 13863769 13863801 10 87 2.0 2.5 2.2 3.1 119 chr3R 13863682 intergenic not near genes chr3R 13863742 intergenic not near genes chr3R 13863801 intergenic not near genes chr3R_10_13860001 chr3R_13860001 RAL-804 1268 chr3R 13948229 13948249 chr3R 13948307 13948327 6 78 2.5 2.5 2.5 1.7 98 chr3R 13948229 intergenic CG31517 + chr3R 13948278 intergenic CG31517 + chr3R 13948327 intergenic CG31517 + chr3R_6_13945001 chr3R_13945001 RAL-804 1269 chr3R 14049015 14049043 chr3R 14049095 14049120 10 79 1.5 2.0 1.8 3.6 105 chr3R 14049015 intergenic not near genes chr3R 14049068 intergenic not near genes chr3R 14049120 intergenic not near genes chr3R_10_14045001 chr3R_14045001 RAL-804 1270 chr3R 14117439 14117469 chr3R 14117515 14117545 5 76 1.5 1.5 1.5 2.0 106 chr3R 14117439 intron Kif19A - chr3R 14117492 intron Kif19A - chr3R 14117545 intron Kif19A - chr3R_5_14115001 chr3R_14115001 RAL-804 1271 chr3R 14136512 14136542 chr3R 14136881 14136904 7 368 0.5 1.0 0.8 3.9 392 chr3R 14136512 intergenic not near genes chr3R 14136708 intergenic not near genes chr3R 14136904 intergenic not near genes chr3R_7_14135001 chr3R_14135001 RAL-804 1272 chr3R 14164982 14165008 chr3R 14165143 14165169 4 161 0.0 0.5 0.2 3.3 187 chr3R 14164982 intergenic Dop1R1 - chr3R 14165076 intergenic Dop1R1 - chr3R 14165169 intergenic Dop1R1 - chr3R_4_14165001 chr3R_14165001 RAL-804 1273 chr3R 14168306 14168320 chr3R 14168838 14168852 6 532 1.0 4.5 2.8 1.6 546 chr3R 14168306 3` UTR Dop1R1 - chr3R 14168579 3` UTR Dop1R1 - chr3R 14168852 3` UTR Dop1R1 - chr3R_6_14165001 chr3R_14165001 RAL-804 1274 chr3R 14172482 14172492 chr3R 14172650 14172656 4 177 1.0 1.5 1.2 1.8 174 chr3R 14172482 3` UTR Dop1R1 - chr3R 14172569 3` UTR Dop1R1 - chr3R 14172656 3` UTR Dop1R1 - chr3R_4_14170001 chr3R_14170001 RAL-804 1275 chr3R 14194426 14194456 chr3R 14203575 14203605 roo 16 9148 4.5 1.5 3.0 4.0 9179 chr3R 14194426 intron Dop1R1 - chr3R 14199016 intron Dop1R1 - chr3R 14203605 intron Dop1R1 - chr3R_16_14195001 chr3R_14195001 RAL-804 1276 chr3R 14246395 14246415 chr3R 14247885 14247910 jockey 7 1493 3.5 5.5 4.5 1.3 1515 chr3R 14246395 intergenic not near genes chr3R 14247152 intergenic not near genes chr3R 14247910 intergenic not near genes chr3R_7_14245001 chr3R_14245001 RAL-804 1277 chr3R 14332831 14332854 chr3R 14333082 14333106 9 252 1.5 3.0 2.2 2.8 275 chr3R 14332831 intron NK7.1 - chr3R 14332968 intron NK7.1 - chr3R 14333106 intron NK7.1 - chr3R_9_14330001 chr3R_14330001 RAL-804 1278 chr3R 14440727 14440742 chr3R 14440803 14440818 4 76 1.5 2.5 2.0 1.3 91 chr3R 14440727 intron cv-c - chr3R 14440772 intron cv-c - chr3R 14440818 intron cv-c - chr3R_4_14440001 chr3R_14440001 RAL-804 1279 chr3R 14527409 14527413 chr3R 14527478 14527490 4 75 4.5 3.0 3.8 0.8 81 chr3R 14527409 intron Pde6 - chr3R 14527450 intron Pde6 - chr3R 14527490 intron Pde6 - chr3R_4_14525001 chr3R_14525001 RAL-804 1280 chr3R 14624265 14624280 chr3R 14624340 14624355 6 76 1.5 3.5 2.5 1.7 90 chr3R 14624265 intron put - chr3R 14624310 intron put - chr3R 14624355 intron put - chr3R_6_14620001 chr3R_14620001 RAL-804 1281 chr3R 14662316 14662337 chr3R 14662396 14662418 13 81 4.5 2.0 3.2 3.1 102 chr3R 14662316 exon Rad17 - chr3R 14662367 intron Rad17 - chr3R 14662418 exon Rad17 - chr3R_13_14660001 chr3R_14660001 RAL-804 1282 chr3R 14704388 14704419 chr3R 14704464 14704495 12 76 4.0 3.0 3.5 2.7 107 chr3R 14704388 intron kibra - chr3R 14704442 intron kibra - chr3R 14704495 intron kibra - chr3R_12_14700001 chr3R_14700001 RAL-804 1283 chr3R 14865220 14865246 chr3R 14865298 14865324 10 78 2.0 2.5 2.2 3.1 104 chr3R 14865220 intron btsz - chr3R 14865272 intron btsz - chr3R 14865324 intron btsz - chr3R_10_14865001 chr3R_14865001 RAL-804 1284 chr3R 14970871 14970906 chr3R 14970958 14970993 8 87 0.5 2.5 1.5 3.2 122 chr3R 14970871 intergenic not near genes chr3R 14970932 intergenic not near genes chr3R 14970993 intergenic not near genes chr3R_8_14970001 chr3R_14970001 RAL-804 1285 chr3R 15058219 15058247 chr3R 15058304 15058332 9 85 3.5 0.0 1.8 3.2 113 chr3R 15058219 intron dpr9 - chr3R 15058276 intron dpr9 - chr3R 15058332 intron dpr9 - chr3R_9_15055001 chr3R_15055001 RAL-804 1286 chr3R 15059277 15059481 chr3R 15059471 15059568 BS 6 105 0.0 0.0 0.0 6.0 291 chr3R 15059277 intron dpr9 - chr3R 15059422 intron dpr9 - chr3R 15059568 intron dpr9 - chr3R_6_15055001 chr3R_15055001 RAL-804 1287 chr3R 15132062 15132087 chr3R 15135112 15135147 Juan 10 3058 4.5 7.5 6.0 1.4 3085 chr3R 15132062 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135147 3` UTR CG6912 - chr3R_10_15130001 chr3R_15130001 RAL-804 1288 chr3R 15143922 15143944 chr3R 15144104 15144127 8 183 2.5 1.5 2.0 2.7 205 chr3R 15143922 intron GlyS - chr3R 15144024 intron GlyS - chr3R 15144127 intron GlyS - chr3R_8_15140001 chr3R_15140001 RAL-804 1289 chr3R 15155513 15155546 chr3R 15155600 15155632 4 87 1.5 0.5 1.0 2.0 119 chr3R 15155513 intron Gyc88E + chr3R 15155572 intron Gyc88E + chr3R 15155632 intron Gyc88E + chr3R_4_15155001 chr3R_15155001 RAL-804 1290 chr3R 15156627 15156633 chr3R 15156683 15156711 6 73 2.5 0.0 1.2 2.7 84 chr3R 15156627 intron Gyc88E + chr3R 15156669 intron Gyc88E + chr3R 15156711 intron Gyc88E + chr3R_6_15155001 chr3R_15155001 RAL-804 1291 chr3R 15416273 15416282 chr3R 15416341 15416361 4 77 1.0 6.5 3.8 0.8 88 chr3R 15416273 3` UTR Atx2 + chr3R 15416317 3` UTR Atx2 + chr3R 15416361 3` UTR Atx2 + chr3R_4_15415001 chr3R_15415001 RAL-804 1292 chr3R 15571244 15571493 chr3R 15571351 15571582 18 102 4.5 5.0 4.8 3.1 338 chr3R 15571244 intergenic not near genes chr3R 15571413 intergenic not near genes chr3R 15571582 intergenic not near genes chr3R_18_15570001 chr3R_15570001 RAL-804 1293 chr3R 15594656 15594676 chr3R 15594738 15594756 6 82 0.0 2.0 1.0 3.0 100 chr3R 15594656 intergenic not near genes chr3R 15594706 intergenic not near genes chr3R 15594756 intergenic not near genes chr3R_6_15590001 chr3R_15590001 RAL-804 1294 chr3R 15601164 15601196 chr3R 15608686 15608718 412 16 7521 4.0 4.0 4.0 3.2 7554 chr3R 15601164 intergenic not near genes chr3R 15604941 intergenic not near genes chr3R 15608718 intergenic not near genes chr3R_16_15600001 chr3R_15600001 RAL-804 1295 chr3R 15618752 15618760 chr3R 15626226 15626234 blood 5 7473 1.0 7.0 4.0 1.0 7482 chr3R 15618752 intergenic not near genes chr3R 15622493 intergenic not near genes chr3R 15626234 intergenic not near genes chr3R_5_15620001 chr3R_15620001 RAL-804 1296 chr3R 15646791 15646798 chr3R 15646874 15646881 4 83 2.0 3.0 2.5 1.1 90 chr3R 15646791 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646881 intergenic not near genes chr3R_4_15645001 chr3R_15645001 RAL-804 1297 chr3R 15691180 15691322 chr3R 15691285 15691408 9 93 0.0 0.0 0.0 9.0 228 chr3R 15691180 intergenic not near genes chr3R 15691294 intergenic not near genes chr3R 15691408 intergenic not near genes chr3R_9_15690001 chr3R_15690001 RAL-804 1298 chr3R 15734170 15734194 chr3R 15734261 15734284 4 90 3.5 3.0 3.2 1.0 114 chr3R 15734170 intergenic not near genes chr3R 15734227 intergenic not near genes chr3R 15734284 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-804 1299 chr3R 15790132 15790286 chr3R 15790240 15790404 19 111 6.5 6.5 6.5 2.5 272 chr3R 15790132 exon c(3)G - chr3R 15790268 exon c(3)G - chr3R 15790404 exon c(3)G - chr3R_19_15790001 chr3R_15790001 RAL-804 1300 chr3R 15790389 15790404 chr3R 15790580 15790610 6 204 7.5 12.0 9.8 0.6 221 chr3R 15790389 exon c(3)G - chr3R 15790500 exon c(3)G - chr3R 15790610 exon c(3)G - chr3R_6_15790001 chr3R_15790001 RAL-804 1301 chr3R 15790836 15790864 chr3R 15790952 15790980 9 116 13.5 11.0 12.2 0.7 144 chr3R 15790836 exon c(3)G - chr3R 15790908 intron c(3)G - chr3R 15790980 exon c(3)G - chr3R_9_15790001 chr3R_15790001 RAL-804 1302 chr3R 15811504 15811535 chr3R 15811744 15811776 14 239 1.0 2.0 1.5 5.6 272 chr3R 15811504 intron alpha-Man-IIb + chr3R 15811640 intron alpha-Man-IIb + chr3R 15811776 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_14_15810001 chr3R_15810001 RAL-804 1303 chr3R 16048866 16048882 chr3R 16048955 16048958 4 86 2.0 5.5 3.8 0.8 92 chr3R 16048866 intron ird5 - chr3R 16048912 intron ird5 - chr3R 16048958 intron ird5 - chr3R_4_16045001 chr3R_16045001 RAL-804 1304 chr3R 16706259 16706289 chr3R 16706662 16706693 10 401 2.5 2.5 2.5 2.9 434 chr3R 16706259 intron Ubx - chr3R 16706476 intron Ubx - chr3R 16706693 intron Ubx - chr3R_10_16705001 chr3R_16705001 RAL-804 1305 chr3R 16734880 16734897 chr3R 16734963 16734980 4 83 0.0 1.0 0.5 2.7 100 chr3R 16734880 intergenic Ubx - chr3R 16734930 intergenic not near genes chr3R 16734980 intergenic not near genes chr3R_4_16730001 chr3R_16730001 RAL-804 1306 chr3R 16741874 16741901 chr3R 16741970 16741991 7 94 1.0 2.0 1.5 2.8 117 chr3R 16741874 intergenic bxd - chr3R 16741932 intergenic bxd - chr3R 16741991 intergenic bxd - chr3R_7_16740001 chr3R_16740001 RAL-804 1307 chr3R 16756332 16756349 chr3R 16762510 16762539 diver 6 6187 2.0 2.5 2.2 1.9 6207 chr3R 16756332 intron bxd - chr3R 16759436 intron bxd - chr3R 16762539 intron bxd - chr3R_6_16755001 chr3R_16755001 RAL-804 1308 chr3R 16794308 16794327 chr3R 16794398 16794417 5 90 0.0 2.5 1.2 2.3 109 chr3R 16794308 intergenic not near genes chr3R 16794362 intergenic not near genes chr3R 16794417 intergenic not near genes chr3R_5_16790001 chr3R_16790001 RAL-804 1309 chr3R 16804487 16804504 chr3R 16804582 16804599 5 95 1.0 2.0 1.5 2.0 112 chr3R 16804487 intergenic not near genes chr3R 16804543 intergenic not near genes chr3R 16804599 intergenic not near genes chr3R_5_16800001 chr3R_16800001 RAL-804 1310 chr3R 16852612 16852632 chr3R 16852928 16852948 7 315 5.0 0.5 2.8 1.8 336 chr3R 16852612 intron,intron iab-8 -,iab-4 + chr3R 16852780 intron,intron iab-8 -,iab-4 + chr3R 16852948 intron,intron iab-8 -,iab-4 + chr3R_7_16850001 chr3R_16850001 RAL-804 1311 chr3R 17015563 17015582 chr3R 17015858 17015877 7 295 1.5 4.0 2.8 1.8 314 chr3R 17015563 intron Pxd + chr3R 17015720 intron Pxd + chr3R 17015877 intron Pxd + chr3R_7_17015001 chr3R_17015001 RAL-804 1312 chr3R 17121531 17121555 chr3R 17121724 17121750 8 194 0.5 2.5 1.5 3.2 219 chr3R 17121531 intron cher - chr3R 17121640 intron,exon cher -,CG42779 + chr3R 17121750 intron,exon cher -,CG42779 + chr3R_8_17120001 chr3R_17120001 RAL-804 1313 chr3R 17346701 17346715 chr3R 17348264 17348278 F-element 5 1563 0.5 1.0 0.8 2.8 1577 chr3R 17346701 intron beat-IIa - chr3R 17347490 intron beat-IIa - chr3R 17348278 intron beat-IIa - chr3R_5_17345001 chr3R_17345001 RAL-804 1314 chr3R 17348728 17348755 chr3R 17348817 17348844 11 89 1.5 1.5 1.5 4.4 116 chr3R 17348728 intron beat-IIa - chr3R 17348786 intron beat-IIa - chr3R 17348844 intron beat-IIa - chr3R_11_17345001 chr3R_17345001 RAL-804 1315 chr3R 17363933 17363964 chr3R 17364468 17364500 4 535 1.0 2.0 1.5 1.6 567 chr3R 17363933 intron beat-IIa - chr3R 17364216 intron beat-IIa - chr3R 17364500 intron beat-IIa - chr3R_4_17360001 chr3R_17360001 RAL-804 1316 chr3R 17382031 17382051 chr3R 17382128 17382148 4 97 2.5 3.0 2.8 1.1 117 chr3R 17382031 intron,intron Brf -,lute + chr3R 17382090 intron,intron Brf -,lute + chr3R 17382148 intron,intron,3` UTR Brf -,lute +,CR43196 - chr3R_4_17380001 chr3R_17380001 RAL-804 1317 chr3R 17389054 17389054 chr3R 21907534 21907535 4 4518480 10.0 14.5 12.2 0.3 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-804 1318 chr3R 17407006 17407032 chr3R 17407108 17407111 4 96 1.0 2.0 1.5 1.6 105 chr3R 17407006 intron CG42798 + chr3R 17407058 5` UTR CG42798 + chr3R 17407111 5` UTR CG42798 + chr3R_4_17405001 chr3R_17405001 RAL-804 1319 chr3R 17461197 17461228 chr3R 17461279 17461309 9 82 3.0 2.5 2.8 2.4 112 chr3R 17461197 intergenic not near genes chr3R 17461253 intergenic not near genes chr3R 17461309 intergenic not near genes chr3R_9_17460001 chr3R_17460001 RAL-804 1320 chr3R 17497966 17497992 chr3R 17498052 17498077 8 86 2.5 1.5 2.0 2.7 111 chr3R 17497966 intron Dscam3 - chr3R 17498022 intron Dscam3 - chr3R 17498077 intron Dscam3 - chr3R_8_17495001 chr3R_17495001 RAL-804 1321 chr3R 17519735 17519751 chr3R 17519830 17519846 5 95 2.0 0.5 1.2 2.3 111 chr3R 17519735 intergenic not near genes chr3R 17519790 intergenic not near genes chr3R 17519846 intergenic not near genes chr3R_5_17515001 chr3R_17515001 RAL-804 1322 chr3R 17531907 17531913 chr3R 17531983 17531989 4 76 0.5 6.5 3.5 0.9 82 chr3R 17531907 intergenic CG5823 - chr3R 17531948 intergenic CG5823 - chr3R 17531989 intergenic CG5823 - chr3R_4_17530001 chr3R_17530001 RAL-804 1323 chr3R 17638318 17638342 chr3R 17638804 17638828 roo 5 486 2.5 3.0 2.8 1.3 510 chr3R 17638318 intron CG43175 + chr3R 17638573 intron CG43175 + chr3R 17638828 intron,intron CG43175 +,CR45222 + chr3R_5_17635001 chr3R_17635001 RAL-804 1324 chr3R 17647244 17647273 chr3R 17647341 17647370 5 97 1.5 1.5 1.5 2.0 126 chr3R 17647244 intergenic CG14322 + chr3R 17647307 intergenic CG14322 + chr3R 17647370 intergenic CG14322 + chr3R_5_17645001 chr3R_17645001 RAL-804 1325 chr3R 17653082 17653112 chr3R 17653172 17653203 6 89 2.5 1.0 1.8 2.1 121 chr3R 17653082 intron,intron CG14322 +,CR45223 - chr3R 17653142 intron,intron CG14322 +,CR45223 - chr3R 17653203 intron,intron CG14322 +,CR45223 - chr3R_6_17650001 chr3R_17650001 RAL-804 1326 chr3R 17739188 17739210 chr3R 17739267 17739269 8 74 7.5 3.5 5.5 1.2 81 chr3R 17739188 intron TyrRII + chr3R 17739228 intron TyrRII + chr3R 17739269 intron TyrRII + chr3R_8_17735001 chr3R_17735001 RAL-804 1327 chr3R 17773376 17773388 chr3R 17773471 17773483 5 95 2.0 2.5 2.2 1.6 107 chr3R 17773376 intron CG43102 - chr3R 17773430 intron CG43102 - chr3R 17773483 exon CG43102 - chr3R_5_17770001 chr3R_17770001 RAL-804 1328 chr3R 17925852 17925886 chr3R 17927319 17927353 hobo 11 1466 3.0 7.0 5.0 1.8 1501 chr3R 17925852 intron cpo + chr3R 17926602 intron cpo + chr3R 17927353 intron cpo + chr3R_11_17925001 chr3R_17925001 RAL-804 1329 chr3R 17983213 17983244 chr3R 17983288 17983315 6 70 2.0 2.0 2.0 2.0 102 chr3R 17983213 intron cpo + chr3R 17983264 intron cpo + chr3R 17983315 intron cpo + chr3R_6_17980001 chr3R_17980001 RAL-804 1330 chr3R 17991672 17991708 chr3R 17991896 17991932 10 224 3.0 2.5 2.8 2.6 260 chr3R 17991672 intron cpo + chr3R 17991802 intron cpo + chr3R 17991932 intron cpo + chr3R_10_17990001 chr3R_17990001 RAL-804 1331 chr3R 17997135 17997136 chr3R 17997206 17997222 4 80 0.0 4.0 2.0 1.3 87 chr3R 17997135 intron cpo + chr3R 17997178 intron cpo + chr3R 17997222 intron cpo + chr3R_4_17995001 chr3R_17995001 RAL-804 1332 chr3R 18041769 18041777 chr3R 18041845 18041854 5 77 0.0 0.5 0.2 4.2 85 chr3R 18041769 intergenic not near genes chr3R 18041812 intergenic not near genes chr3R 18041854 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-804 1333 chr3R 18143560 18143590 chr3R 18143649 18143679 4 89 1.0 1.5 1.2 1.8 119 chr3R 18143560 intergenic not near genes chr3R 18143620 intergenic not near genes chr3R 18143679 intergenic not near genes chr3R_4_18140001 chr3R_18140001 RAL-804 1334 chr3R 18237583 18237596 chr3R 18237674 18237687 6 90 2.5 5.0 3.8 1.2 104 chr3R 18237583 intron repo + chr3R 18237635 intron repo + chr3R 18237687 intron repo + chr3R_6_18235001 chr3R_18235001 RAL-804 1335 chr3R 18328443 18328474 chr3R 18328521 18328551 16 74 3.5 3.0 3.2 3.8 108 chr3R 18328443 intron CG31235 - chr3R 18328497 intron CG31235 - chr3R 18328551 intron CG31235 - chr3R_16_18325001 chr3R_18325001 RAL-804 1336 chr3R 18359510 18359529 chr3R 18359964 18359984 7 453 4.5 0.0 2.2 2.2 474 chr3R 18359510 intron CG15803 - chr3R 18359747 intron CG15803 - chr3R 18359984 intron CG15803 - chr3R_7_18355001 chr3R_18355001 RAL-804 1337 chr3R 18473245 18473254 chr3R 18473332 18473341 4 87 0.0 0.0 0.0 4.0 96 chr3R 18473245 intron fru - chr3R 18473293 intron fru - chr3R 18473341 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-804 1338 chr3R 18501593 18501618 chr3R 18501674 18501698 4 81 5.5 4.5 5.0 0.7 105 chr3R 18501593 intron fru - chr3R 18501646 intron fru - chr3R 18501698 intron fru - chr3R_4_18500001 chr3R_18500001 RAL-804 1339 chr3R 18606519 18606534 chr3R 18610741 18610755 F-element 5 4222 1.5 0.5 1.0 2.5 4236 chr3R 18606519 intron,intron qin +,CG14304 - chr3R 18608637 intron,intron qin +,CG14304 - chr3R 18610755 intron,intron qin +,CG14304 - chr3R_5_18605001 chr3R_18605001 RAL-804 1340 chr3R 18612107 18612138 chr3R 18612190 18612222 8 83 3.5 4.5 4.0 1.6 115 chr3R 18612107 intron,intron qin +,CG14304 - chr3R 18612164 intron,intron qin +,CG14304 - chr3R 18612222 intron,intron qin +,CG14304 - chr3R_8_18610001 chr3R_18610001 RAL-804 1341 chr3R 18766775 18766806 chr3R 18766853 18766884 10 78 3.5 1.5 2.5 2.9 109 chr3R 18766775 intron CG7720 - chr3R 18766830 intron CG7720 - chr3R 18766884 intron CG7720 - chr3R_10_18765001 chr3R_18765001 RAL-804 1342 chr3R 18812079 18812101 chr3R 18812157 18812179 6 78 5.0 4.0 4.5 1.1 100 chr3R 18812079 intron CG18208 - chr3R 18812129 intron CG18208 - chr3R 18812179 intron CG18208 - chr3R_6_18810001 chr3R_18810001 RAL-804 1343 chr3R 18885936 18885951 chr3R 18886017 18886032 6 81 7.5 0.0 3.8 1.2 96 chr3R 18885936 intergenic not near genes chr3R 18885984 intergenic not near genes chr3R 18886032 intergenic not near genes chr3R_6_18885001 chr3R_18885001 RAL-804 1344 chr3R 19033925 19033960 chr3R 19034003 19034038 5 71 1.5 6.0 3.8 1.0 113 chr3R 19033925 intron CG6026 + chr3R 19033982 intron CG6026 + chr3R 19034038 intron CG6026 + chr3R_5_19030001 chr3R_19030001 RAL-804 1345 chr3R 19081980 19081990 chr3R 19082057 19082069 5 78 0.0 3.5 1.8 1.8 89 chr3R 19081980 intron cdi - chr3R 19082024 intron cdi - chr3R 19082069 intron cdi - chr3R_5_19080001 chr3R_19080001 RAL-804 1346 chr3R 19106820 19106852 chr3R 19106910 19106915 6 82 5.0 0.5 2.8 1.6 95 chr3R 19106820 intron CG6040 + chr3R 19106868 intron CG6040 + chr3R 19106915 intron CG6040 + chr3R_6_19105001 chr3R_19105001 RAL-804 1347 chr3R 19140263 19140300 chr3R 19140711 19140748 8 447 2.5 0.5 1.5 3.2 485 chr3R 19140263 3` UTR Ppcs - chr3R 19140506 3` UTR Ppcs - chr3R 19140748 3` UTR Ppcs - chr3R_8_19140001 chr3R_19140001 RAL-804 1348 chr3R 19570318 19570340 chr3R 19570394 19570416 8 76 2.5 5.5 4.0 1.6 98 chr3R 19570318 intron Dys + chr3R 19570367 intron Dys + chr3R 19570416 intron Dys + chr3R_8_19570001 chr3R_19570001 RAL-804 1349 chr3R 19604677 19604710 chr3R 19604810 19604843 14 133 2.5 1.0 1.8 5.0 166 chr3R 19604677 exon CG7342 + chr3R 19604760 intron CG7342 + chr3R 19604843 intron CG7342 + chr3R_14_19600001 chr3R_19600001 RAL-804 1350 chr3R 19611995 19612012 chr3R 19616028 19616047 7 4033 15.0 12.5 13.8 0.5 4052 chr3R 19611995 exon CG17752 + chr3R 19614021 exon CG16727 + chr3R 19616047 3` UTR CG6231 - chr3R_7_19610001 chr3R_19610001 RAL-804 1351 chr3R 19668664 19668679 chr3R 19668735 19668739 7 71 3.5 7.0 5.2 1.1 75 chr3R 19668664 exon CG7432 + chr3R 19668702 exon CG7432 + chr3R 19668739 exon CG7432 + chr3R_7_19665001 chr3R_19665001 RAL-804 1352 chr3R 19874977 19874997 chr3R 19875054 19875075 5 78 2.5 2.0 2.2 1.6 98 chr3R 19874977 intron CG4562 - chr3R 19875026 intron CG4562 - chr3R 19875075 intron CG4562 - chr3R_5_19875001 chr3R_19875001 RAL-804 1353 chr3R 19953950 19953983 chr3R 19954027 19954057 5 71 2.0 5.0 3.5 1.1 107 chr3R 19953950 intron Hs6st - chr3R 19954004 intron Hs6st - chr3R 19954057 intron Hs6st - chr3R_5_19950001 chr3R_19950001 RAL-804 1354 chr3R 19965017 19965046 chr3R 19965106 19965135 6 89 1.5 1.5 1.5 2.4 118 chr3R 19965017 intron Hs6st - chr3R 19965076 intron Hs6st - chr3R 19965135 intron Hs6st - chr3R_6_19965001 chr3R_19965001 RAL-804 1355 chr3R 20008821 20008850 chr3R 20008902 20008930 12 81 3.0 4.5 3.8 2.5 109 chr3R 20008821 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008930 intergenic MED25 +,Hs6st - chr3R_12_20005001 chr3R_20005001 RAL-804 1356 chr3R 20094282 20094287 chr3R 20094358 20094363 4 76 2.5 0.0 1.2 1.8 81 chr3R 20094282 intergenic not near genes chr3R 20094322 intergenic not near genes chr3R 20094363 intergenic not near genes chr3R_4_20090001 chr3R_20090001 RAL-804 1357 chr3R 20109540 20109567 chr3R 20114746 20114773 copia 8 5206 1.0 3.0 2.0 2.7 5233 chr3R 20109540 intergenic not near genes chr3R 20112156 intergenic not near genes chr3R 20114773 intergenic CG10887 + chr3R_8_20110001 chr3R_20110001 RAL-804 1358 chr3R 20138455 20138480 chr3R 20138539 20138566 11 85 0.0 5.5 2.8 2.9 111 chr3R 20138455 intergenic not near genes chr3R 20138510 intergenic not near genes chr3R 20138566 intergenic not near genes chr3R_11_20135001 chr3R_20135001 RAL-804 1359 chr3R 20156698 20156721 chr3R 20165867 20165891 roo 5 9169 3.0 3.0 3.0 1.2 9193 chr3R 20156698 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165891 intergenic not near genes chr3R_5_20160001 chr3R_20160001 RAL-804 1360 chr3R 20201357 20201378 chr3R 20201443 20201464 5 86 4.5 2.0 3.2 1.2 107 chr3R 20201357 intergenic not near genes chr3R 20201410 intergenic not near genes chr3R 20201464 intergenic not near genes chr3R_5_20200001 chr3R_20200001 RAL-804 1361 chr3R 20242580 20242609 chr3R 20242683 20242712 10 103 1.5 0.5 1.0 5.0 132 chr3R 20242580 intron Nlg4 + chr3R 20242646 intron Nlg4 + chr3R 20242712 intron Nlg4 + chr3R_10_20240001 chr3R_20240001 RAL-804 1362 chr3R 20266531 20266544 chr3R 20273002 20273015 Burdock 8 6471 0.0 5.5 2.8 2.1 6484 chr3R 20266531 intron cic + chr3R 20269773 intron cic + chr3R 20273015 intron cic + chr3R_8_20265001 chr3R_20265001 RAL-804 1363 chr3R 20308193 20308204 chr3R 20308281 20308292 4 88 1.0 0.0 0.5 2.7 99 chr3R 20308193 intergenic not near genes chr3R 20308242 intergenic not near genes chr3R 20308292 intergenic not near genes chr3R_4_20305001 chr3R_20305001 RAL-804 1364 chr3R 20351514 20351522 chr3R 20351635 20351648 4 126 1.5 6.0 3.8 0.8 134 chr3R 20351514 intergenic not near genes chr3R 20351581 intergenic not near genes chr3R 20351648 intergenic not near genes chr3R_4_20350001 chr3R_20350001 RAL-804 1365 chr3R 20406510 20406519 chr3R 20406609 20406618 4 99 0.5 0.0 0.2 3.3 108 chr3R 20406510 intron Gfrl - chr3R 20406564 intron Gfrl - chr3R 20406618 intron,3` UTR Gfrl -,CG4335 - chr3R_4_20405001 chr3R_20405001 RAL-804 1366 chr3R 20456099 20456125 chr3R 20456203 20456229 7 103 6.5 3.0 4.8 1.2 130 chr3R 20456099 intron Gfrl - chr3R 20456164 intron Gfrl - chr3R 20456229 intron Gfrl - chr3R_7_20455001 chr3R_20455001 RAL-804 1367 chr3R 20458011 20458034 chr3R 20458100 20458123 7 89 4.0 0.0 2.0 2.3 112 chr3R 20458011 intron Gfrl - chr3R 20458067 intron Gfrl - chr3R 20458123 intron Gfrl - chr3R_7_20455001 chr3R_20455001 RAL-804 1368 chr3R 20467087 20467112 chr3R 20467163 20467187 6 76 2.5 3.0 2.8 1.6 100 chr3R 20467087 intron Gfrl - chr3R 20467137 intron Gfrl - chr3R 20467187 intron Gfrl - chr3R_6_20465001 chr3R_20465001 RAL-804 1369 chr3R 20546343 20546369 chr3R 20546429 20546455 5 86 0.5 3.5 2.0 1.7 112 chr3R 20546343 intron Stat92E - chr3R 20546399 intron Stat92E - chr3R 20546455 intron Stat92E - chr3R_5_20545001 chr3R_20545001 RAL-804 1370 chr3R 20617508 20617518 chr3R 20617777 20617787 4 269 0.0 0.5 0.2 3.3 279 chr3R 20617508 intergenic CG5466 + chr3R 20617648 intergenic CG5466 + chr3R 20617787 intergenic CG5466 + chr3R_4_20615001 chr3R_20615001 RAL-804 1371 chr3R 20673928 20673960 chr3R 20674018 20674050 7 88 1.5 3.0 2.2 2.2 122 chr3R 20673928 intergenic not near genes chr3R 20673989 intergenic not near genes chr3R 20674050 intergenic not near genes chr3R_7_20670001 chr3R_20670001 RAL-804 1372 chr3R 20684215 20684242 chr3R 20684299 20684326 4 84 0.5 1.0 0.8 2.2 111 chr3R 20684215 intergenic not near genes chr3R 20684270 intergenic not near genes chr3R 20684326 intergenic not near genes chr3R_4_20680001 chr3R_20680001 RAL-804 1373 chr3R 20703481 20703513 chr3R 20703874 20703907 9 393 0.5 1.5 1.0 4.5 426 chr3R 20703481 intron Oamb - chr3R 20703694 intron Oamb - chr3R 20703907 intron Oamb - chr3R_9_20700001 chr3R_20700001 RAL-804 1374 chr3R 20934815 20934839 chr3R 20934894 20934918 7 79 6.5 5.0 5.8 1.0 103 chr3R 20934815 intron CG31191 - chr3R 20934866 intron CG31191 - chr3R 20934918 intron CG31191 - chr3R_7_20930001 chr3R_20930001 RAL-804 1375 chr3R 20994952 20994984 chr3R 20995038 20995053 10 76 2.0 2.0 2.0 3.3 101 chr3R 20994952 intron Calx + chr3R 20995002 intron Calx + chr3R 20995053 intron Calx + chr3R_10_20995001 chr3R_20995001 RAL-804 1376 chr3R 21020409 21020430 chr3R 21020485 21020506 4 76 0.5 1.5 1.0 2.0 97 chr3R 21020409 3` UTR Rlip + chr3R 21020458 3` UTR Rlip + chr3R 21020506 3` UTR Rlip + chr3R_4_21020001 chr3R_21020001 RAL-804 1377 chr3R 21041115 21041129 chr3R 21041268 21041282 6 153 2.5 5.0 3.8 1.2 167 chr3R 21041115 exon Dhc93AB - chr3R 21041198 intron Dhc93AB - chr3R 21041282 intron Dhc93AB - chr3R_6_21040001 chr3R_21040001 RAL-804 1378 chr3R 21074810 21074817 chr3R 21075031 21075038 4 221 0.5 5.0 2.8 1.1 228 chr3R 21074810 intron dmrt93B + chr3R 21074924 intron dmrt93B + chr3R 21075038 intron dmrt93B + chr3R_4_21070001 chr3R_21070001 RAL-804 1379 chr3R 21076316 21076321 chr3R 21076395 21076395 4 77 0.5 2.0 1.2 1.8 79 chr3R 21076316 exon dmrt93B + chr3R 21076356 intron dmrt93B + chr3R 21076395 intron dmrt93B + chr3R_4_21075001 chr3R_21075001 RAL-804 1380 chr3R 21108053 21108065 chr3R 21108314 21108326 9 261 2.5 3.5 3.0 2.2 273 chr3R 21108053 intergenic Sec15 -,rtet + chr3R 21108190 intergenic Sec15 -,rtet + chr3R 21108326 intergenic rtet +,Sec15 - chr3R_9_21105001 chr3R_21105001 RAL-804 1381 chr3R 21141684 21141705 chr3R 21150164 21150186 Tirant 4 8481 0.5 4.5 2.5 1.1 8502 chr3R 21141684 intron SNF4Agamma + chr3R 21145935 intron SNF4Agamma + chr3R 21150186 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-804 1382 chr3R 21154551 21154583 chr3R 21154756 21154798 4 212 2.5 0.0 1.2 1.8 247 chr3R 21154551 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154798 intron SNF4Agamma + chr3R_4_21150001 chr3R_21150001 RAL-804 1383 chr3R 21383276 21383294 chr3R 21383352 21383374 4 79 0.5 1.0 0.8 2.2 98 chr3R 21383276 intergenic not near genes chr3R 21383325 intergenic not near genes chr3R 21383374 intergenic not near genes chr3R_4_21380001 chr3R_21380001 RAL-804 1384 chr3R 21464406 21464422 chr3R 21464492 21464508 4 86 1.0 0.5 0.8 2.2 102 chr3R 21464406 intergenic not near genes chr3R 21464457 intergenic not near genes chr3R 21464508 intergenic not near genes chr3R_4_21460001 chr3R_21460001 RAL-804 1385 chr3R 21472019 21472034 chr3R 21472100 21472114 8 81 2.5 4.5 3.5 1.8 95 chr3R 21472019 intergenic not near genes chr3R 21472066 intergenic not near genes chr3R 21472114 intergenic not near genes chr3R_8_21470001 chr3R_21470001 RAL-804 1386 chr3R 21519986 21520135 chr3R 21520087 21520229 6 98 2.5 2.5 2.5 1.7 243 chr3R 21519986 intergenic not near genes chr3R 21520108 intergenic not near genes chr3R 21520229 intergenic not near genes chr3R_6_21520001 chr3R_21520001 RAL-804 1387 chr3R 21609002 21609042 chr3R 21611636 21611655 NOF 14 2630 1.0 3.5 2.2 4.4 2653 chr3R 21609002 intron InR - chr3R 21610328 intron InR - chr3R 21611655 intron InR - chr3R_14_21610001 chr3R_21610001 RAL-804 1388 chr3R 21692491 21692520 chr3R 21692577 21692604 7 86 0.5 4.0 2.2 2.2 113 chr3R 21692491 intron CG31176 - chr3R 21692548 intron CG31176 - chr3R 21692604 intron CG31176 - chr3R_7_21690001 chr3R_21690001 RAL-804 1389 chr3R 21734865 21734886 chr3R 21734941 21734962 8 76 5.5 0.5 3.0 2.0 97 chr3R 21734865 intergenic not near genes chr3R 21734914 intergenic not near genes chr3R 21734962 intergenic not near genes chr3R_8_21730001 chr3R_21730001 RAL-804 1390 chr3R 21761127 21761154 chr3R 21768511 21768546 mdg1 6 7387 3.5 4.0 3.8 1.2 7419 chr3R 21761127 exon CG42335 + chr3R 21764836 intron CG42335 + chr3R 21768546 exon CG42335 + chr3R_6_21760001 chr3R_21760001 RAL-804 1391 chr3R 21784858 21784883 chr3R 21784956 21784981 10 98 2.0 0.5 1.2 4.5 123 chr3R 21784858 3` UTR,3` UTR CASK -,CRG - chr3R 21784920 3` UTR,3` UTR CASK -,CRG - chr3R 21784981 3` UTR,3` UTR CASK -,CRG - chr3R_10_21780001 chr3R_21780001 RAL-804 1392 chr3R 21820473 21820496 chr3R 21820567 21820584 7 98 3.0 2.5 2.8 1.8 111 chr3R 21820473 intron CASK - chr3R 21820528 intron CASK - chr3R 21820584 intron CASK - chr3R_7_21820001 chr3R_21820001 RAL-804 1393 chr3R 8339246 8339246 chr3R 21907534 21907534 5 13568288 12.5 14.5 13.5 0.3 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-804 1394 chr3R 21907534 21907534 chr3R 28831801 28831802 7 6924268 16.0 17.5 16.8 0.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_7_25365001 chr3R_25365001 RAL-804 1395 chr3R 8339246 8339247 chr3R 21907535 21907535 4 13568288 12.5 14.5 13.5 0.3 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-804 1396 chr3R 21907535 21907535 chr3R 28831801 28831802 15 6924266 15.5 17.5 16.5 0.9 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-804 1397 chr3R 21907536 21907536 chr3R 28831801 28831802 15 6924266 15.0 17.5 16.2 0.9 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-804 1398 chr3R 22239489 22239503 chr3R 22248549 22248563 roo 6 9060 4.5 0.0 2.2 1.9 9074 chr3R 22239489 intron SKIP + chr3R 22244026 intron SKIP + chr3R 22248563 intron SKIP + chr3R_6_22240001 chr3R_22240001 RAL-804 1399 chr3R 22286155 22286165 chr3R 22286229 22286241 5 76 2.0 6.0 4.0 1.0 86 chr3R 22286155 intron SKIP + chr3R 22286198 intron SKIP + chr3R 22286241 intron SKIP + chr3R_5_22285001 chr3R_22285001 RAL-804 1400 chr3R 22428582 22428602 chr3R 22428658 22428678 7 76 1.5 3.5 2.5 2.0 96 chr3R 22428582 intron CG13847 - chr3R 22428630 intron CG13847 - chr3R 22428678 intron CG13847 - chr3R_7_22425001 chr3R_22425001 RAL-804 1401 chr3R 22433089 22433101 chr3R 22433189 22433201 6 97 3.5 5.5 4.5 1.1 112 chr3R 22433089 intron CG13847 - chr3R 22433145 intron CG13847 - chr3R 22433201 intron CG13847 - chr3R_6_22430001 chr3R_22430001 RAL-804 1402 chr3R 22433103 22433105 chr3R 22433181 22433205 4 91 3.5 5.0 4.2 0.8 102 chr3R 22433103 intron CG13847 - chr3R 22433154 intron CG13847 - chr3R 22433205 intron CG13847 - chr3R_4_22430001 chr3R_22430001 RAL-804 1403 chr3R 22450547 22450577 chr3R 22453182 22453217 NOF 14 2638 2.0 3.5 2.8 3.7 2670 chr3R 22450547 intron CG34376 + chr3R 22451882 intron CG34376 + chr3R 22453217 intron CG34376 + chr3R_14_22450001 chr3R_22450001 RAL-804 1404 chr3R 22538444 22538472 chr3R 22538529 22538557 10 84 1.5 2.5 2.0 3.3 113 chr3R 22538444 intron CG5326 - chr3R 22538500 intron CG5326 - chr3R 22538557 intron CG5326 - chr3R_10_22535001 chr3R_22535001 RAL-804 1405 chr3R 22572244 22572260 chr3R 22572332 22572348 6 87 3.0 1.5 2.2 1.9 104 chr3R 22572244 intron CG33110 + chr3R 22572296 intron CG33110 + chr3R 22572348 intron CG33110 + chr3R_6_22570001 chr3R_22570001 RAL-804 1406 chr3R 22640370 22640391 chr3R 22640452 22640473 6 82 0.0 0.0 0.0 6.0 103 chr3R 22640370 intron wake + chr3R 22640422 intron wake + chr3R 22640473 intron wake + chr3R_6_22640001 chr3R_22640001 RAL-804 1407 chr3R 22646925 22646942 chr3R 22647013 22647030 4 88 1.0 0.0 0.5 2.7 105 chr3R 22646925 intron wake + chr3R 22646978 intron wake + chr3R 22647030 intron wake + chr3R_4_22645001 chr3R_22645001 RAL-804 1408 chr3R 22769095 22769122 chr3R 22769171 22769199 12 76 4.0 5.0 4.5 2.2 104 chr3R 22769095 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769147 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769199 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_12_22765001 chr3R_22765001 RAL-804 1409 chr3R 22802898 22802931 chr3R 22802978 22803011 13 80 0.0 2.5 1.2 5.9 113 chr3R 22802898 intergenic not near genes chr3R 22802954 intergenic not near genes chr3R 22803011 intergenic not near genes chr3R_13_22800001 chr3R_22800001 RAL-804 1410 chr3R 22840813 22840849 chr3R 22841275 22841311 8 457 1.5 3.0 2.2 2.5 498 chr3R 22840813 intergenic not near genes chr3R 22841062 intergenic not near genes chr3R 22841311 intergenic not near genes chr3R_8_22840001 chr3R_22840001 RAL-804 1411 chr3R 22852135 22852157 chr3R 22852240 22852251 5 102 0.5 3.5 2.0 1.7 116 chr3R 22852135 intergenic CR43846 - chr3R 22852193 intergenic CR43846 - chr3R 22852251 intergenic CR43846 - chr3R_5_22850001 chr3R_22850001 RAL-804 1412 chr3R 22861230 22861245 chr3R 22861332 22861346 5 100 4.5 3.5 4.0 1.0 116 chr3R 22861230 intergenic not near genes chr3R 22861288 intergenic not near genes chr3R 22861346 intergenic not near genes chr3R_5_22860001 chr3R_22860001 RAL-804 1413 chr3R 22861248 22861259 chr3R 22861329 22861360 4 96 3.5 2.5 3.0 1.0 112 chr3R 22861248 intergenic not near genes chr3R 22861304 intergenic not near genes chr3R 22861360 intergenic not near genes chr3R_4_22860001 chr3R_22860001 RAL-804 1414 chr3R 22954329 22954362 chr3R 22954407 22954440 11 72 3.5 5.5 4.5 2.0 111 chr3R 22954329 intron klg + chr3R 22954384 intron klg + chr3R 22954440 intron klg + chr3R_11_22950001 chr3R_22950001 RAL-804 1415 chr3R 23073657 23073689 chr3R 23073743 23073755 10 83 3.5 2.0 2.8 2.6 98 chr3R 23073657 intron CG13830 - chr3R 23073706 intron CG13830 - chr3R 23073755 intron CG13830 - chr3R_10_23070001 chr3R_23070001 RAL-804 1416 chr3R 23090402 23090434 chr3R 23090485 23090517 16 83 1.0 4.5 2.8 4.2 115 chr3R 23090402 intron CG13830 - chr3R 23090460 intron CG13830 - chr3R 23090517 intron CG13830 - chr3R_16_23090001 chr3R_23090001 RAL-804 1417 chr3R 23091260 23091286 chr3R 23091345 23091371 6 85 2.0 0.0 1.0 3.0 111 chr3R 23091260 intron CG13830 - chr3R 23091316 intron CG13830 - chr3R 23091371 intron CG13830 - chr3R_6_23090001 chr3R_23090001 RAL-804 1418 chr3R 23114165 23114190 chr3R 23114243 23114268 7 78 4.0 2.0 3.0 1.8 103 chr3R 23114165 3` UTR Rassf - chr3R 23114216 3` UTR Rassf - chr3R 23114268 3` UTR Rassf - chr3R_7_23110001 chr3R_23110001 RAL-804 1419 chr3R 23242294 23242324 chr3R 23242374 23242402 7 79 4.0 4.0 4.0 1.4 108 chr3R 23242294 intron CG4467 - chr3R 23242348 intron CG4467 - chr3R 23242402 intron CG4467 - chr3R_7_23240001 chr3R_23240001 RAL-804 1420 chr3R 23421976 23422004 chr3R 23422061 23422089 6 84 2.0 2.0 2.0 2.0 113 chr3R 23421976 intron CG4374 - chr3R 23422032 intron CG4374 - chr3R 23422089 intron CG4374 - chr3R_6_23420001 chr3R_23420001 RAL-804 1421 chr3R 23439452 23439480 chr3R 23439532 23439560 6 80 0.0 2.5 1.2 2.7 108 chr3R 23439452 intron CG4374 - chr3R 23439506 intron CG4374 - chr3R 23439560 intron CG4374 - chr3R_6_23435001 chr3R_23435001 RAL-804 1422 chr3R 23453680 23453713 chr3R 23453759 23453792 7 79 1.5 2.5 2.0 2.3 112 chr3R 23453680 intron CG4374 - chr3R 23453736 intron CG4374 - chr3R 23453792 intron CG4374 - chr3R_7_23450001 chr3R_23450001 RAL-804 1423 chr3R 23497961 23497968 chr3R 23498043 23498052 4 84 3.0 4.5 3.8 0.8 91 chr3R 23497961 intergenic not near genes chr3R 23498006 intergenic not near genes chr3R 23498052 intergenic not near genes chr3R_4_23495001 chr3R_23495001 RAL-804 1424 chr3R 23558401 23558424 chr3R 23560182 23560205 Bari1 5 1781 1.5 2.0 1.8 1.8 1804 chr3R 23558401 intron beat-IV + chr3R 23559303 intron beat-IV + chr3R 23560205 intron beat-IV + chr3R_5_23555001 chr3R_23555001 RAL-804 1425 chr3R 23639930 23639960 chr3R 23640236 23640262 10 304 1.5 2.5 2.0 3.3 332 chr3R 23639930 intron CG31145 - chr3R 23640096 intron CG31145 - chr3R 23640262 intron CG31145 - chr3R_10_23640001 chr3R_23640001 RAL-804 1426 chr3R 23650250 23650274 chr3R 23650374 23650398 6 124 3.0 0.0 1.5 2.4 148 chr3R 23650250 intron CG31145 - chr3R 23650324 intron CG31145 - chr3R 23650398 intron CG31145 - chr3R_6_23650001 chr3R_23650001 RAL-804 1427 chr3R 23656037 23656061 chr3R 23656143 23656167 4 106 1.0 2.5 1.8 1.4 130 chr3R 23656037 intron CG31145 - chr3R 23656102 intron CG31145 - chr3R 23656167 intron CG31145 - chr3R_4_23655001 chr3R_23655001 RAL-804 1428 chr3R 23684696 23684730 chr3R 23685180 23685195 roo 7 473 1.5 2.0 1.8 2.5 499 chr3R 23684696 exon CG18754 + chr3R 23684946 intron CG18754 + chr3R 23685195 exon CG18754 + chr3R_7_23680001 chr3R_23680001 RAL-804 1429 chr3R 23823352 23823384 chr3R 23823457 23823489 10 105 2.0 3.0 2.5 2.9 137 chr3R 23823352 intron CG34355 + chr3R 23823420 intron CG34355 + chr3R 23823489 intron CG34355 + chr3R_10_23820001 chr3R_23820001 RAL-804 1430 chr3R 23846113 23846152 chr3R 23846198 23846237 17 85 1.5 0.5 1.0 8.5 124 chr3R 23846113 intron CG34355 + chr3R 23846175 intron CG34355 + chr3R 23846237 intron CG34355 + chr3R_17_23845001 chr3R_23845001 RAL-804 1431 chr3R 23938676 23938680 chr3R 23939108 23939112 4 432 6.5 3.0 4.8 0.7 436 chr3R 23938676 intron Gdh - chr3R 23938894 intron Gdh - chr3R 23939112 intron Gdh - chr3R_4_23935001 chr3R_23935001 RAL-804 1432 chr3R 23944918 23944936 chr3R 23945003 23945021 11 85 4.0 5.0 4.5 2.0 103 chr3R 23944918 intron CG12268 - chr3R 23944970 intron CG12268 - chr3R 23945021 exon CG12268 - chr3R_11_23940001 chr3R_23940001 RAL-804 1433 chr3R 23949046 23949074 chr3R 23949123 23949151 5 77 2.0 1.0 1.5 2.0 105 chr3R 23949046 intergenic not near genes chr3R 23949098 intergenic not near genes chr3R 23949151 intergenic not near genes chr3R_5_23945001 chr3R_23945001 RAL-804 1434 chr3R 24001597 24001616 chr3R 24001684 24001689 4 84 2.5 9.0 5.8 0.6 92 chr3R 24001597 intron KrT95D - chr3R 24001643 intron KrT95D - chr3R 24001689 intron KrT95D - chr3R_4_24000001 chr3R_24000001 RAL-804 1435 chr3R 24015061 24015095 chr3R 24015135 24015151 7 71 0.5 0.0 0.2 5.8 90 chr3R 24015061 intron KrT95D - chr3R 24015106 intron KrT95D - chr3R 24015151 intron KrT95D - chr3R_7_24015001 chr3R_24015001 RAL-804 1436 chr3R 24072085 24072096 chr3R 24072523 24072534 jockey 4 437 11.5 4.5 8.0 0.4 449 chr3R 24072085 intron 4EHP - chr3R 24072310 intron 4EHP - chr3R 24072534 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-804 1437 chr3R 24072097 24072115 chr3R 24072521 24072547 jockey 10 434 5.5 4.0 4.8 1.7 450 chr3R 24072097 intron 4EHP - chr3R 24072322 intron 4EHP - chr3R 24072547 intron 4EHP - chr3R_10_24070001 chr3R_24070001 RAL-804 1438 chr3R 24076917 24076949 chr3R 24078383 24078400 hobo 11 1465 5.0 4.0 4.5 2.0 1483 chr3R 24076917 intron 4EHP - chr3R 24077658 intron 4EHP - chr3R 24078400 intron 4EHP - chr3R_11_24075001 chr3R_24075001 RAL-804 1439 chr3R 24207213 24207246 chr3R 24212289 24212322 flea 8 5075 4.5 5.5 5.0 1.3 5109 chr3R 24207213 intron twin - chr3R 24209768 intron twin - chr3R 24212322 intron twin - chr3R_8_24205001 chr3R_24205001 RAL-804 1440 chr3R 24236468 24236491 chr3R 24236545 24236568 9 76 6.5 3.5 5.0 1.5 100 chr3R 24236468 exon mask + chr3R 24236518 intron mask + chr3R 24236568 intron mask + chr3R_9_24235001 chr3R_24235001 RAL-804 1441 chr3R 24433477 24433504 chr3R 24433556 24433583 7 79 2.0 5.5 3.8 1.5 106 chr3R 24433477 intron nAChRalpha1 - chr3R 24433530 intron nAChRalpha1 - chr3R 24433583 intron nAChRalpha1 - chr3R_7_24430001 chr3R_24430001 RAL-804 1442 chr3R 24466466 24466497 chr3R 24466543 24466573 6 78 1.0 0.5 0.8 3.3 107 chr3R 24466466 intergenic not near genes chr3R 24466520 intergenic not near genes chr3R 24466573 intergenic not near genes chr3R_6_24465001 chr3R_24465001 RAL-804 1443 chr3R 24495289 24495319 chr3R 24495368 24495395 9 79 5.0 2.0 3.5 2.0 106 chr3R 24495289 intergenic not near genes chr3R 24495342 intergenic not near genes chr3R 24495395 intergenic not near genes chr3R_9_24495001 chr3R_24495001 RAL-804 1444 chr3R 24527813 24527827 chr3R 24527904 24527918 4 91 0.5 1.0 0.8 2.2 105 chr3R 24527813 intergenic CG6607 +,CG13618 + chr3R 24527866 intergenic CG6607 +,CG13618 + chr3R 24527918 intergenic CG6607 +,CG13618 + chr3R_4_24525001 chr3R_24525001 RAL-804 1445 chr3R 24548559 24548592 chr3R 24548643 24548676 7 84 0.0 3.0 1.5 2.8 117 chr3R 24548559 intron Esyt2 + chr3R 24548618 intron Esyt2 + chr3R 24548676 intron Esyt2 + chr3R_7_24545001 chr3R_24545001 RAL-804 1446 chr3R 24605547 24605556 chr3R 24605647 24605654 6 100 6.0 10.5 8.2 0.7 107 chr3R 24605547 intron mld + chr3R 24605600 intron mld + chr3R 24605654 intron mld + chr3R_6_24605001 chr3R_24605001 RAL-804 1447 chr3R 24670166 24670188 chr3R 24670250 24670272 6 84 1.5 2.5 2.0 2.0 106 chr3R 24670166 intron slo + chr3R 24670219 intron slo + chr3R 24670272 intron slo + chr3R_6_24670001 chr3R_24670001 RAL-804 1448 chr3R 24730098 24730115 chr3R 24732476 24732492 Doc 6 2377 5.0 0.0 2.5 1.7 2394 chr3R 24730098 intron tok + chr3R 24731295 intron tok + chr3R 24732492 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-804 1449 chr3R 24912482 24912513 chr3R 24912562 24912595 5 81 2.5 1.5 2.0 1.7 113 chr3R 24912482 intergenic not near genes chr3R 24912538 intergenic CR44267 + chr3R 24912595 intergenic CR44267 + chr3R_5_24910001 chr3R_24910001 RAL-804 1450 chr3R 24927125 24927153 chr3R 24931916 24931941 Doc 5 4790 2.0 3.5 2.8 1.3 4816 chr3R 24927125 intergenic Trf4-2 + chr3R 24929533 intergenic not near genes chr3R 24931941 intergenic CG11771 + chr3R_5_24925001 chr3R_24925001 RAL-804 1451 chr3R 25004900 25004917 chr3R 25004983 25005000 8 83 0.0 5.0 2.5 2.3 100 chr3R 25004900 intron tnc + chr3R 25004950 intron tnc + chr3R 25005000 intron tnc + chr3R_8_25000001 chr3R_25000001 RAL-804 1452 chr3R 25377408 25377433 chr3R 25377495 25377520 4 87 2.5 2.5 2.5 1.1 112 chr3R 25377408 intron Fur1 - chr3R 25377464 intron Fur1 - chr3R 25377520 intron Fur1 - chr3R_4_25375001 chr3R_25375001 RAL-804 1453 chr3R 25434992 25435016 chr3R 25435111 25435135 7 118 9.0 7.5 8.2 0.8 143 chr3R 25434992 intron Fur1 - chr3R 25435064 intron Fur1 - chr3R 25435135 intron Fur1 - chr3R_7_25435001 chr3R_25435001 RAL-804 1454 chr3R 25709640 25709646 chr3R 25709722 25709728 4 81 7.0 13.0 10.0 0.4 88 chr3R 25709640 intron LpR2 - chr3R 25709684 intron LpR2 - chr3R 25709728 intron LpR2 - chr3R_4_25705001 chr3R_25705001 RAL-804 1455 chr3R 25725842 25725859 chr3R 25735002 25735019 roo 5 9160 0.0 1.0 0.5 3.3 9177 chr3R 25725842 intron LpR2 - chr3R 25730430 intron LpR2 - chr3R 25735019 intron LpR2 - chr3R_5_25730001 chr3R_25730001 RAL-804 1456 chr3R 25765875 25765912 chr3R 25765954 25765967 9 71 9.0 8.5 8.8 0.9 92 chr3R 25765875 intergenic not near genes chr3R 25765921 intergenic not near genes chr3R 25765967 intergenic not near genes chr3R_9_25765001 chr3R_25765001 RAL-804 1457 chr3R 25796379 25796397 chr3R 25796458 25796476 5 79 4.0 0.0 2.0 1.7 97 chr3R 25796379 intergenic CR43847 - chr3R 25796428 intergenic CR43847 - chr3R 25796476 intergenic CR43847 - chr3R_5_25795001 chr3R_25795001 RAL-804 1458 chr3R 25831556 25831574 chr3R 25831635 25831652 6 79 0.0 1.0 0.5 4.0 96 chr3R 25831556 intergenic Mst57Da - chr3R 25831604 3` UTR Mst57Da - chr3R 25831652 exon Mst57Da - chr3R_6_25830001 chr3R_25830001 RAL-804 1459 chr3R 25832695 25832721 chr3R 25841876 25841902 roo 12 9180 5.0 4.5 4.8 2.1 9207 chr3R 25832695 exon alpha4GT2 + chr3R 25837298 intron alpha4GT2 + chr3R 25841902 exon alpha4GT2 + chr3R_12_25835001 chr3R_25835001 RAL-804 1460 chr3R 25846632 25846664 chr3R 25846710 25846742 10 78 3.5 3.0 3.2 2.4 110 chr3R 25846632 intergenic CR45655 +,CR45654 + chr3R 25846687 intergenic CR45655 +,CR45654 + chr3R 25846742 intergenic CR45655 +,CR45654 +,CR45656 - chr3R_10_25845001 chr3R_25845001 RAL-804 1461 chr3R 25983700 25983719 chr3R 25983796 25983817 6 98 3.0 5.5 4.2 1.2 117 chr3R 25983700 exon Nf1 + chr3R 25983758 intron Nf1 + chr3R 25983817 intron Nf1 + chr3R_6_25980001 chr3R_25980001 RAL-804 1462 chr3R 26066360 26066382 chr3R 26066445 26066467 6 84 6.5 6.5 6.5 0.8 107 chr3R 26066360 intergenic not near genes chr3R 26066414 intergenic not near genes chr3R 26066467 intergenic not near genes chr3R_6_26065001 chr3R_26065001 RAL-804 1463 chr3R 26093848 26093872 chr3R 26093925 26093950 18 77 2.0 5.0 3.5 4.0 102 chr3R 26093848 intron dys - chr3R 26093899 intron dys - chr3R 26093950 intron dys - chr3R_18_26090001 chr3R_26090001 RAL-804 1464 chr3R 26108826 26108843 chr3R 26117409 26117416 Tirant 5 8580 8.5 0.0 4.2 1.0 8590 chr3R 26108826 5` UTR CG31324 + chr3R 26113121 intron CG31324 + chr3R 26117416 intron CG31324 + chr3R_5_26110001 chr3R_26110001 RAL-804 1465 chr3R 26121952 26121977 chr3R 26122047 26122074 10 96 0.0 5.5 2.8 2.6 122 chr3R 26121952 intron CG31324 + chr3R 26122013 intron CG31324 + chr3R 26122074 intron CG31324 + chr3R_10_26120001 chr3R_26120001 RAL-804 1466 chr3R 26126269 26126288 chr3R 26126374 26126392 8 104 3.5 2.0 2.8 2.1 123 chr3R 26126269 intron CG31324 + chr3R 26126330 intron CG31324 + chr3R 26126392 intron CG31324 + chr3R_8_26125001 chr3R_26125001 RAL-804 1467 chr3R 26241271 26241280 chr3R 26241362 26241370 4 91 1.0 4.5 2.8 1.1 99 chr3R 26241271 intron CR42745 + chr3R 26241320 intron CR42745 + chr3R 26241370 intron CR42745 + chr3R_4_26240001 chr3R_26240001 RAL-804 1468 chr3R 26250329 26250347 chr3R 26250423 26250440 5 94 17.5 14.0 15.8 0.3 111 chr3R 26250329 intron CR42745 + chr3R 26250384 intron CR42745 + chr3R 26250440 intron CR42745 + chr3R_5_26250001 chr3R_26250001 RAL-804 1469 chr3R 26292111 26292130 chr3R 26292191 26292210 4 80 1.0 1.0 1.0 2.0 99 chr3R 26292111 intergenic not near genes chr3R 26292160 intergenic not near genes chr3R 26292210 intergenic not near genes chr3R_4_26290001 chr3R_26290001 RAL-804 1470 chr3R 26294716 26294736 chr3R 26294794 26294814 4 76 6.0 8.5 7.2 0.5 98 chr3R 26294716 intergenic not near genes chr3R 26294765 intergenic not near genes chr3R 26294814 intergenic not near genes chr3R_4_26290001 chr3R_26290001 RAL-804 1471 chr3R 26314858 26314885 chr3R 26315224 26315252 6 367 2.5 4.5 3.5 1.3 394 chr3R 26314858 intergenic not near genes chr3R 26315055 intergenic not near genes chr3R 26315252 intergenic not near genes chr3R_6_26315001 chr3R_26315001 RAL-804 1472 chr3R 26376324 26376356 chr3R 26385484 26385515 roo 9 9159 1.0 1.5 1.2 4.1 9191 chr3R 26376324 intergenic not near genes chr3R 26380920 intergenic not near genes chr3R 26385515 intergenic not near genes chr3R_9_26380001 chr3R_26380001 RAL-804 1473 chr3R 26542061 26542064 chr3R 26542135 26542155 4 83 8.0 8.0 8.0 0.4 94 chr3R 26542061 intron scrib + chr3R 26542108 intron scrib + chr3R 26542155 intron scrib + chr3R_4_26540001 chr3R_26540001 RAL-804 1474 chr3R 26546011 26546023 chr3R 26546193 26546205 4 179 6.5 12.5 9.5 0.4 194 chr3R 26546011 intron scrib + chr3R 26546108 intron scrib + chr3R 26546205 intron scrib + chr3R_4_26545001 chr3R_26545001 RAL-804 1475 chr3R 26558348 26558361 chr3R 26565642 26565668 Stalker4 8 7304 0.5 3.0 1.8 2.9 7320 chr3R 26558348 intron scrib + chr3R 26562008 intron scrib + chr3R 26565668 intron scrib + chr3R_8_26560001 chr3R_26560001 RAL-804 1476 chr3R 26568066 26568093 chr3R 26568146 26568169 5 76 5.0 8.0 6.5 0.7 103 chr3R 26568066 intron scrib + chr3R 26568118 intron scrib + chr3R 26568169 intron scrib + chr3R_5_26565001 chr3R_26565001 RAL-804 1477 chr3R 26575008 26575039 chr3R 26575087 26575118 15 79 2.0 6.5 4.2 2.9 110 chr3R 26575008 exon scrib + chr3R 26575063 intron scrib + chr3R 26575118 intron scrib + chr3R_15_26575001 chr3R_26575001 RAL-804 1478 chr3R 26607758 26607770 chr3R 26607827 26607838 4 68 10.5 13.0 11.8 0.3 80 chr3R 26607758 5` UTR CR44951 + chr3R 26607798 5` UTR CR44951 + chr3R 26607838 5` UTR CR44951 + chr3R_4_26605001 chr3R_26605001 RAL-804 1479 chr3R 26611342 26611373 chr3R 26611418 26611449 7 75 9.0 9.0 9.0 0.7 107 chr3R 26611342 intergenic not near genes chr3R 26611396 intergenic not near genes chr3R 26611449 intergenic not near genes chr3R_7_26610001 chr3R_26610001 RAL-804 1480 chr3R 26641639 26641656 chr3R 26641725 26641743 7 86 5.0 2.5 3.8 1.5 104 chr3R 26641639 intergenic not near genes chr3R 26641691 intergenic not near genes chr3R 26641743 intergenic not near genes chr3R_7_26640001 chr3R_26640001 RAL-804 1481 chr3R 26642728 26642752 chr3R 26643121 26643144 jockey 5 393 5.5 0.5 3.0 1.2 416 chr3R 26642728 intergenic not near genes chr3R 26642936 intergenic not near genes chr3R 26643144 intergenic not near genes chr3R_5_26640001 chr3R_26640001 RAL-804 1482 chr3R 26767366 26767393 chr3R 26767443 26767449 8 75 6.5 3.0 4.8 1.4 83 chr3R 26767366 intergenic not near genes chr3R 26767408 intergenic not near genes chr3R 26767449 intergenic not near genes chr3R_8_26765001 chr3R_26765001 RAL-804 1483 chr3R 26770243 26770273 chr3R 26770320 26770350 8 77 2.0 3.5 2.8 2.1 107 chr3R 26770243 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770350 intergenic not near genes chr3R_8_26770001 chr3R_26770001 RAL-804 1484 chr3R 26784799 26784803 chr3R 26789311 26789315 4 4512 31.5 17.5 24.5 0.2 4516 chr3R 26784799 exon CG42790 + chr3R 26787057 intergenic not near genes chr3R 26789315 intergenic not near genes chr3R_4_26785001 chr3R_26785001 RAL-804 1485 chr3R 26810551 26810583 chr3R 26811036 26811068 roo 13 484 2.5 2.5 2.5 3.7 517 chr3R 26810551 intron Tl + chr3R 26810810 intron Tl + chr3R 26811068 intron Tl + chr3R_13_26810001 chr3R_26810001 RAL-804 1486 chr3R 27028729 27028753 chr3R 27028817 27028841 5 88 2.0 7.0 4.5 0.9 112 chr3R 27028729 intron RYa-R + chr3R 27028785 intron RYa-R + chr3R 27028841 intron RYa-R + chr3R_5_27025001 chr3R_27025001 RAL-804 1487 chr3R 27030224 27030250 chr3R 27030352 27030379 12 129 2.0 0.0 1.0 6.0 155 chr3R 27030224 intron RYa-R + chr3R 27030302 intron RYa-R + chr3R 27030379 intron RYa-R + chr3R_12_27030001 chr3R_27030001 RAL-804 1488 chr3R 27077107 27077126 chr3R 27077187 27077206 8 80 2.5 4.5 3.5 1.8 99 chr3R 27077107 intron CG14257 + chr3R 27077156 intron CG14257 + chr3R 27077206 intron CG14257 + chr3R_8_27075001 chr3R_27075001 RAL-804 1489 chr3R 27140513 27140545 chr3R 27148123 27148153 412 13 7609 5.0 2.5 3.8 2.7 7640 chr3R 27140513 intron CG6051 - chr3R 27144333 intron CG6051 - chr3R 27148153 intron CG6051 - chr3R_13_27140001 chr3R_27140001 RAL-804 1490 chr3R 27315995 27316012 chr3R 27316071 27316088 5 75 3.5 2.5 3.0 1.2 93 chr3R 27315995 intron CG3339 - chr3R 27316042 intron CG3339 - chr3R 27316088 exon CG3339 - chr3R_5_27315001 chr3R_27315001 RAL-804 1491 chr3R 27329474 27329496 chr3R 27329551 27329573 4 77 4.0 3.0 3.5 0.9 99 chr3R 27329474 intergenic CG3330 - chr3R 27329524 intergenic CG3330 - chr3R 27329573 intergenic CG3330 - chr3R_4_27325001 chr3R_27325001 RAL-804 1492 chr3R 27342794 27342816 chr3R 27351375 27351397 Tirant 7 8581 3.5 2.0 2.8 1.8 8603 chr3R 27342794 intron CG42534 + chr3R 27347096 intron CG42534 + chr3R 27351397 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-804 1493 chr3R 27377389 27377496 chr3R 27377472 27377575 9 84 1.5 1.5 1.5 3.6 186 chr3R 27377389 3` UTR side - chr3R 27377482 3` UTR side - chr3R 27377575 3` UTR side - chr3R_9_27375001 chr3R_27375001 RAL-804 1494 chr3R 27492381 27492396 chr3R 27492468 27492483 4 87 5.0 0.5 2.8 1.1 102 chr3R 27492381 intergenic not near genes chr3R 27492432 intergenic not near genes chr3R 27492483 intergenic not near genes chr3R_4_27490001 chr3R_27490001 RAL-804 1495 chr3R 27570268 27570300 chr3R 27570353 27570385 6 85 2.5 2.5 2.5 1.7 117 chr3R 27570268 intron wdb - chr3R 27570326 intron wdb - chr3R 27570385 intron wdb - chr3R_6_27570001 chr3R_27570001 RAL-804 1496 chr3R 27574108 27574132 chr3R 27574507 27574531 4 398 5.5 3.5 4.5 0.7 423 chr3R 27574108 intron wdb - chr3R 27574320 intron wdb - chr3R 27574531 intron wdb - chr3R_4_27570001 chr3R_27570001 RAL-804 1497 chr3R 27627088 27627116 chr3R 27627190 27627212 13 100 4.0 4.0 4.0 2.6 124 chr3R 27627088 intron Tusp + chr3R 27627150 intron Tusp + chr3R 27627212 intron Tusp + chr3R_13_27625001 chr3R_27625001 RAL-804 1498 chr3R 27705363 27705384 chr3R 27705442 27705464 6 80 6.0 8.0 7.0 0.8 101 chr3R 27705363 exon CG12428 - chr3R 27705414 intron CG12428 - chr3R 27705464 exon CG12428 - chr3R_6_27705001 chr3R_27705001 RAL-804 1499 chr3R 27725563 27725596 chr3R 27731005 27731038 I-element 11 5442 2.0 3.0 2.5 3.1 5475 chr3R 27725563 intergenic not near genes chr3R 27728300 intergenic not near genes chr3R 27731038 intergenic not near genes chr3R_11_27725001 chr3R_27725001 RAL-804 1500 chr3R 27731203 27731230 chr3R 27731284 27731309 4 80 6.0 9.0 7.5 0.5 106 chr3R 27731203 intergenic not near genes chr3R 27731256 intergenic not near genes chr3R 27731309 intergenic not near genes chr3R_4_27730001 chr3R_27730001 RAL-804 1501 chr3R 27779272 27779287 chr3R 27779352 27779366 7 79 1.0 7.5 4.2 1.3 94 chr3R 27779272 exon CG34353 - chr3R 27779319 intron CG34353 - chr3R 27779366 intron CG34353 - chr3R_7_27775001 chr3R_27775001 RAL-804 1502 chr3R 27789079 27789099 chr3R 27789155 27789176 6 74 5.0 3.5 4.2 1.2 97 chr3R 27789079 exon CG34353 - chr3R 27789128 intron CG34353 - chr3R 27789176 intron CG34353 - chr3R_6_27785001 chr3R_27785001 RAL-804 1503 chr3R 27799938 27799964 chr3R 27800018 27800046 11 82 3.5 4.0 3.8 2.3 108 chr3R 27799938 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800046 intron CG34353 - chr3R_11_27795001 chr3R_27795001 RAL-804 1504 chr3R 27856758 27856789 chr3R 27858241 27858272 hopper2 10 1483 4.0 6.0 5.0 1.7 1514 chr3R 27856758 intron CG34353 - chr3R 27857515 intron CG34353 - chr3R 27858272 intron CG34353 - chr3R_10_27855001 chr3R_27855001 RAL-804 1505 chr3R 27862952 27862970 chr3R 27868257 27868275 Transpac 6 5305 7.0 1.0 4.0 1.2 5323 chr3R 27862952 intron CG34353 - chr3R 27865614 intron CG34353 - chr3R 27868275 intron CG34353 - chr3R_6_27865001 chr3R_27865001 RAL-804 1506 chr3R 27875704 27875728 chr3R 27882759 27882783 297 10 7055 2.5 4.0 3.2 2.4 7079 chr3R 27875704 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882783 intron CG34353 - chr3R_10_27875001 chr3R_27875001 RAL-804 1507 chr3R 28054452 28054475 chr3R 28054524 28054551 7 75 4.0 4.0 4.0 1.4 99 chr3R 28054452 intron CG34362 + chr3R 28054502 intron CG34362 + chr3R 28054551 intron CG34362 + chr3R_7_28050001 chr3R_28050001 RAL-804 1508 chr3R 28068498 28068521 chr3R 28073940 28073963 I-element 10 5440 3.0 4.0 3.5 2.2 5465 chr3R 28068498 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073963 intron CG34362 + chr3R_10_28070001 chr3R_28070001 RAL-804 1509 chr3R 28103328 28103348 chr3R 28103418 28103441 7 89 3.0 2.5 2.8 1.8 113 chr3R 28103328 intergenic not near genes chr3R 28103384 intergenic not near genes chr3R 28103441 intergenic not near genes chr3R_7_28100001 chr3R_28100001 RAL-804 1510 chr3R 28129913 28129930 chr3R 28130002 28130019 4 89 5.5 2.5 4.0 0.8 106 chr3R 28129913 intergenic not near genes chr3R 28129966 intergenic not near genes chr3R 28130019 intergenic not near genes chr3R_4_28125001 chr3R_28125001 RAL-804 1511 chr3R 28173680 28173704 chr3R 28181110 28181134 mdg1 8 7430 2.5 3.0 2.8 2.1 7454 chr3R 28173680 intron CG34354 + chr3R 28177407 intron CG34354 + chr3R 28181134 intron CG34354 + chr3R_8_28175001 chr3R_28175001 RAL-804 1512 chr3R 28223267 28223282 chr3R 28223353 28223368 4 86 11.5 7.0 9.2 0.4 101 chr3R 28223267 intron CG34354 + chr3R 28223318 intron CG34354 + chr3R 28223368 intron CG34354 + chr3R_4_28220001 chr3R_28220001 RAL-804 1513 chr3R 28253344 28253371 chr3R 28255854 28255881 jockey 10 2509 2.0 6.5 4.2 1.9 2537 chr3R 28253344 intergenic not near genes chr3R 28254612 intergenic not near genes chr3R 28255881 intergenic not near genes chr3R_10_28250001 chr3R_28250001 RAL-804 1514 chr3R 28286330 28286349 chr3R 28286418 28286424 4 82 7.0 8.5 7.8 0.5 94 chr3R 28286330 intergenic not near genes chr3R 28286377 intergenic not near genes chr3R 28286424 intergenic not near genes chr3R_4_28285001 chr3R_28285001 RAL-804 1515 chr3R 28390120 28390143 chr3R 28390192 28390221 9 74 7.5 7.0 7.2 1.1 101 chr3R 28390120 intergenic not near genes chr3R 28390170 intergenic not near genes chr3R 28390221 intergenic not near genes chr3R_9_28390001 chr3R_28390001 RAL-804 1516 chr3R 28393699 28393728 chr3R 28393799 28393828 5 100 7.5 2.5 5.0 0.8 129 chr3R 28393699 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393828 intergenic not near genes chr3R_5_28390001 chr3R_28390001 RAL-804 1517 chr3R 28449595 28449620 chr3R 28450569 28450594 5 974 4.5 2.0 3.2 1.2 999 chr3R 28449595 intron beat-VI + chr3R 28450094 intron beat-VI + chr3R 28450594 intron beat-VI + chr3R_5_28450001 chr3R_28450001 RAL-804 1518 chr3R 28478421 28478425 chr3R 28478500 28478505 4 80 12.0 5.0 8.5 0.4 84 chr3R 28478421 intergenic not near genes chr3R 28478463 intergenic not near genes chr3R 28478505 intergenic not near genes chr3R_4_28475001 chr3R_28475001 RAL-804 1519 chr3R 28478426 28478520 chr3R 28478497 28478596 8 75 4.0 6.0 5.0 1.3 170 chr3R 28478426 intergenic not near genes chr3R 28478511 intergenic not near genes chr3R 28478596 intergenic not near genes chr3R_8_28475001 chr3R_28475001 RAL-804 1520 chr3R 28484353 28484375 chr3R 28486270 28486292 18 1918 19.0 31.0 25.0 0.7 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_18_28485001 chr3R_28485001 RAL-804 1521 chr3R 28554490 28554520 chr3R 28554852 28554880 5 359 9.0 8.5 8.8 0.5 390 chr3R 28554490 intergenic not near genes chr3R 28554685 intergenic not near genes chr3R 28554880 intergenic not near genes chr3R_5_28550001 chr3R_28550001 RAL-804 1522 chr3R 28594123 28594130 chr3R 28594180 28594209 5 74 2.0 1.0 1.5 2.0 86 chr3R 28594123 5` UTR CR43440 + chr3R 28594166 5` UTR CR43440 + chr3R 28594209 5` UTR CR43440 + chr3R_5_28590001 chr3R_28590001 RAL-804 1523 chr3R 28646426 28646445 chr3R 28646499 28646522 7 76 10.5 13.5 12.0 0.5 96 chr3R 28646426 intergenic not near genes chr3R 28646474 intergenic not near genes chr3R 28646522 intergenic not near genes chr3R_7_28645001 chr3R_28645001 RAL-804 1524 chr3R 28744538 28744550 chr3R 28744677 28744692 4 143 12.0 12.5 12.2 0.3 154 chr3R 28744538 5` UTR AstA-R2 - chr3R 28744615 5` UTR AstA-R2 - chr3R 28744692 5` UTR AstA-R2 - chr3R_4_28740001 chr3R_28740001 RAL-804 1525 chr3R 28775034 28775045 chr3R 28775159 28775184 6 136 6.5 4.5 5.5 0.9 150 chr3R 28775034 intergenic not near genes chr3R 28775109 intergenic not near genes chr3R 28775184 intergenic not near genes chr3R_6_28775001 chr3R_28775001 RAL-804 1526 chr3R 28792870 28792899 chr3R 28797965 28797979 jockey 8 5093 2.0 3.5 2.8 2.1 5109 chr3R 28792870 intergenic not near genes chr3R 28795424 intergenic not near genes chr3R 28797979 intergenic not near genes chr3R_8_28795001 chr3R_28795001 RAL-804 1527 chr3R 21907534 21907534 chr3R 28831799 28831803 49 6924266 16.0 18.0 17.0 2.7 6924269 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831803 intron WASp - chr3R_49_25365001 chr3R_25365001 RAL-804 1528 chr3R 28968413 28968445 chr3R 28968490 28968522 6 77 5.0 3.5 4.2 1.2 109 chr3R 28968413 intron CG14521 - chr3R 28968468 intron CG14521 - chr3R 28968522 intron CG14521 - chr3R_6_28965001 chr3R_28965001 RAL-804 1529 chr3R 29054027 29054052 chr3R 29054103 29054128 4 76 0.5 4.0 2.2 1.2 101 chr3R 29054027 intergenic CG11842 +,CG11843 + chr3R 29054078 intergenic CG11842 +,CG11843 + chr3R 29054128 intergenic CG11842 +,CG11843 + chr3R_4_29050001 chr3R_29050001 RAL-804 1530 chr3R 29070056 29070076 chr3R 29070137 29070157 4 81 1.5 1.0 1.2 1.8 101 chr3R 29070056 intron CG11873 + chr3R 29070106 intron CG11873 + chr3R 29070157 intron CG11873 + chr3R_4_29070001 chr3R_29070001 RAL-804 1531 chr3R 29213059 29213091 chr3R 29213142 29213174 17 83 2.5 3.5 3.0 4.2 115 chr3R 29213059 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213174 intergenic not near genes chr3R_17_29210001 chr3R_29210001 RAL-804 1532 chr3R 29237277 29237283 chr3R 29239279 29239303 5 2009 7.5 8.0 7.8 0.6 2026 chr3R 29237277 exon CG11951 - chr3R 29238290 intron CG11951 - chr3R 29239303 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-804 1533 chr3R 29239231 29239244 chr3R 29245518 29245535 5 6289 4.5 15.0 9.8 0.5 6304 chr3R 29239231 exon CG31427 - chr3R 29242383 exon CG31445 - chr3R 29245535 exon SP1029 - chr3R_5_29240001 chr3R_29240001 RAL-804 1534 chr3R 29319828 29319853 chr3R 29320147 29320172 jockey 4 319 1.0 6.5 3.8 0.8 344 chr3R 29319828 intergenic Cnx99A - chr3R 29320000 intergenic Cnx99A - chr3R 29320172 intergenic not near genes chr3R_4_29320001 chr3R_29320001 RAL-804 1535 chr3R 29350688 29350718 chr3R 29350784 29350811 8 98 2.5 5.5 4.0 1.6 123 chr3R 29350688 intergenic not near genes chr3R 29350750 intergenic not near genes chr3R 29350811 intergenic not near genes chr3R_8_29350001 chr3R_29350001 RAL-804 1536 chr3R 29376005 29376227 chr3R 29376068 29376303 4 73 0.5 2.0 1.2 1.8 298 chr3R 29376005 intergenic not near genes chr3R 29376154 intergenic not near genes chr3R 29376303 intergenic not near genes chr3R_4_29375001 chr3R_29375001 RAL-804 1537 chr3R 29406616 29406629 chr3R 29407902 29407903 jockey 6 1282 4.5 2.5 3.5 1.3 1287 chr3R 29406616 intron Ptp99A + chr3R 29407260 intron Ptp99A + chr3R 29407903 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 RAL-804 1538 chr3R 29406630 29406652 chr3R 29407901 29407922 jockey 7 1280 2.0 2.0 2.0 2.3 1292 chr3R 29406630 intron Ptp99A + chr3R 29407276 intron Ptp99A + chr3R 29407922 intron Ptp99A + chr3R_7_29405001 chr3R_29405001 RAL-804 1539 chr3R 29429792 29429802 chr3R 29429870 29429873 4 75 4.5 3.0 3.8 0.8 81 chr3R 29429792 intron Ptp99A + chr3R 29429832 intron Ptp99A + chr3R 29429873 intron Ptp99A + chr3R_4_29425001 chr3R_29425001 RAL-804 1540 chr3R 29446992 29447023 chr3R 29447079 29447102 10 86 2.5 3.5 3.0 2.5 110 chr3R 29446992 intron Ptp99A + chr3R 29447047 intron Ptp99A + chr3R 29447102 intron Ptp99A + chr3R_10_29445001 chr3R_29445001 RAL-804 1541 chr3R 29472008 29472035 chr3R 29472100 29472128 8 93 2.0 2.5 2.2 2.5 120 chr3R 29472008 intron Ptp99A + chr3R 29472068 intron Ptp99A + chr3R 29472128 intron Ptp99A + chr3R_8_29470001 chr3R_29470001 RAL-804 1542 chr3R 29511931 29511936 chr3R 29512021 29512026 4 90 1.5 1.5 1.5 1.6 95 chr3R 29511931 intergenic not near genes chr3R 29511978 intergenic not near genes chr3R 29512026 intergenic not near genes chr3R_4_29510001 chr3R_29510001 RAL-804 1543 chr3R 29539434 29539455 chr3R 29539510 29539531 8 76 2.0 0.0 1.0 4.0 97 chr3R 29539434 intergenic not near genes chr3R 29539482 intergenic not near genes chr3R 29539531 intergenic not near genes chr3R_8_29535001 chr3R_29535001 RAL-804 1544 chr3R 29546759 29546784 chr3R 29546828 29546842 7 67 2.0 3.0 2.5 2.0 83 chr3R 29546759 intergenic not near genes chr3R 29546800 intergenic not near genes chr3R 29546842 intergenic not near genes chr3R_7_29545001 chr3R_29545001 RAL-804 1545 chr3R 29552090 29552117 chr3R 29552201 29552232 8 113 4.0 7.5 5.8 1.2 142 chr3R 29552090 intergenic not near genes chr3R 29552161 intergenic not near genes chr3R 29552232 intergenic not near genes chr3R_8_29550001 chr3R_29550001 RAL-804 1546 chr3R 29581552 29581564 chr3R 29581633 29581645 4 81 2.0 4.0 3.0 1.0 93 chr3R 29581552 intergenic not near genes chr3R 29581598 intergenic not near genes chr3R 29581645 intergenic not near genes chr3R_4_29580001 chr3R_29580001 RAL-804 1547 chr3R 29590378 29590404 chr3R 29590471 29590496 12 93 3.0 4.0 3.5 2.7 118 chr3R 29590378 intron CG31041 - chr3R 29590437 intron CG31041 - chr3R 29590496 intron CG31041 - chr3R_12_29590001 chr3R_29590001 RAL-804 1548 chr3R 29606096 29606117 chr3R 29606200 29606224 5 106 1.0 6.5 3.8 1.0 128 chr3R 29606096 intron alph + chr3R 29606160 intron alph + chr3R 29606224 intron alph + chr3R_5_29605001 chr3R_29605001 RAL-804 1549 chr3R 29738294 29738301 chr3R 29739762 29739768 hobo 4 1468 3.0 2.0 2.5 1.1 1474 chr3R 29738294 5` UTR CG1969 + chr3R 29739031 intron CG1969 + chr3R 29739768 5` UTR CG1969 + chr3R_4_29735001 chr3R_29735001 RAL-804 1550 chr3R 29882022 29882048 chr3R 29891179 29891205 roo 10 9157 6.5 0.5 3.5 2.2 9183 chr3R 29882022 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891205 intron CG31038 + chr3R_10_29885001 chr3R_29885001 RAL-804 1551 chr3R 29963479 29963509 chr3R 29963581 29963611 8 101 2.5 5.5 4.0 1.6 132 chr3R 29963479 intron TkR99D - chr3R 29963545 intron TkR99D - chr3R 29963611 intron TkR99D - chr3R_8_29960001 chr3R_29960001 RAL-804 1552 chr3R 30084849 30084873 chr3R 30086316 30086340 hobo 10 1467 5.0 3.5 4.2 1.9 1491 chr3R 30084849 intron sima + chr3R 30085594 intron sima + chr3R 30086340 intron sima + chr3R_10_30085001 chr3R_30085001 RAL-804 1553 chr3R 30124960 30124980 chr3R 30125036 30125041 6 73 1.5 4.0 2.8 1.6 81 chr3R 30124960 intergenic CG45073 - chr3R 30125000 intergenic CG45073 - chr3R 30125041 intergenic CG45073 - chr3R_6_30125001 chr3R_30125001 RAL-804 1554 chr3R 30182760 30182786 chr3R 30182893 30182925 7 137 2.5 2.0 2.2 2.2 165 chr3R 30182760 intergenic not near genes chr3R 30182842 intergenic not near genes chr3R 30182925 intergenic not near genes chr3R_7_30180001 chr3R_30180001 RAL-804 1555 chr3R 30183709 30183731 chr3R 30183795 30183822 7 90 3.0 3.0 3.0 1.8 113 chr3R 30183709 intergenic CR44262 - chr3R 30183766 intergenic CR44262 - chr3R 30183822 intergenic CR44262 - chr3R_7_30180001 chr3R_30180001 RAL-804 1556 chr3R 30224093 30224118 chr3R 30224258 30224288 12 167 3.0 3.0 3.0 3.0 195 chr3R 30224093 intergenic not near genes chr3R 30224190 intergenic not near genes chr3R 30224288 intergenic not near genes chr3R_12_30220001 chr3R_30220001 RAL-804 1557 chr3R 30234457 30234487 chr3R 30234733 30234743 12 274 3.5 0.5 2.0 4.0 286 chr3R 30234457 intergenic not near genes chr3R 30234600 intergenic not near genes chr3R 30234743 intergenic not near genes chr3R_12_30230001 chr3R_30230001 RAL-804 1558 chr3R 30246308 30246329 chr3R 30246387 30246408 8 77 0.0 1.0 0.5 5.3 100 chr3R 30246308 intron CG9733 - chr3R 30246358 intron CG9733 - chr3R 30246408 intron CG9733 - chr3R_8_30245001 chr3R_30245001 RAL-804 1559 chr3R 30252276 30252289 chr3R 30252403 30252417 6 127 6.5 7.0 6.8 0.8 141 chr3R 30252276 exon CG9682 + chr3R 30252346 exon CG9682 + chr3R 30252417 exon CG9682 + chr3R_6_30250001 chr3R_30250001 RAL-804 1560 chr3R 30268244 30268265 chr3R 30268323 30268340 9 78 9.0 1.5 5.2 1.5 96 chr3R 30268244 intergenic not near genes chr3R 30268292 intergenic not near genes chr3R 30268340 intergenic not near genes chr3R_9_30265001 chr3R_30265001 RAL-804 1561 chr3R 30268414 30268446 chr3R 30268495 30268525 10 77 4.0 3.5 3.8 2.1 111 chr3R 30268414 intergenic not near genes chr3R 30268470 intergenic not near genes chr3R 30268525 intergenic not near genes chr3R_10_30265001 chr3R_30265001 RAL-804 1562 chr3R 30396221 30396242 chr3R 30404486 30404508 roo 6 8266 2.5 3.5 3.0 1.5 8287 chr3R 30396221 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404508 5` UTR CR45570 + chr3R_6_30400001 chr3R_30400001 RAL-804 1563 chr3R 30458012 30458048 chr3R 30458092 30458128 8 80 1.5 1.5 1.5 3.2 116 chr3R 30458012 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458128 intron CG2224 - chr3R_8_30455001 chr3R_30455001 RAL-804 1564 chr3R 30480476 30480511 chr3R 30482943 30482979 jockey 13 2467 3.5 3.5 3.5 2.9 2503 chr3R 30480476 intron PH4alphaEFB + chr3R 30481728 intron PH4alphaEFB + chr3R 30482979 intron PH4alphaEFB + chr3R_13_30480001 chr3R_30480001 RAL-804 1565 chr3R 30498411 30498431 chr3R 30498611 30498631 5 200 0.0 4.5 2.2 1.6 220 chr3R 30498411 intron PH4alphaNE1 - chr3R 30498521 intron PH4alphaNE1 - chr3R 30498631 intron PH4alphaNE1 - chr3R_5_30495001 chr3R_30495001 RAL-804 1566 chr3R 30549017 30549036 chr3R 30549109 30549128 7 91 1.5 2.5 2.0 2.3 111 chr3R 30549017 intron tmod + chr3R 30549072 intron tmod + chr3R 30549128 intron tmod + chr3R_7_30545001 chr3R_30545001 RAL-804 1567 chr3R 30571708 30571712 chr3R 30571788 30571792 4 80 1.0 4.0 2.5 1.1 84 chr3R 30571708 intron tmod + chr3R 30571750 intron tmod + chr3R 30571792 intron tmod + chr3R_4_30570001 chr3R_30570001 RAL-804 1568 chr3R 30578147 30578180 chr3R 30578224 30578232 8 73 4.0 5.0 4.5 1.5 85 chr3R 30578147 3` UTR tmod + chr3R 30578190 3` UTR tmod + chr3R 30578232 3` UTR tmod + chr3R_8_30575001 chr3R_30575001 RAL-804 1569 chr3R 30664793 30664799 chr3R 30664888 30664894 4 95 1.0 0.0 0.5 2.7 101 chr3R 30664793 5` UTR CR45191 + chr3R 30664844 5` UTR CR45191 + chr3R 30664894 5` UTR CR45191 + chr3R_4_30660001 chr3R_30660001 RAL-804 1570 chr3R 30679519 30679552 chr3R 30686988 30687021 blood 15 7469 1.5 6.0 3.8 3.1 7502 chr3R 30679519 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687021 intergenic not near genes chr3R_15_30680001 chr3R_30680001 RAL-804 1571 chr3R 30888928 30888945 chr3R 30893456 30893472 7 4527 20.5 14.0 17.2 0.4 4544 chr3R 30888928 exon Sap-r - chr3R 30891200 intergenic not near genes chr3R 30893472 intergenic not near genes chr3R_7_30890001 chr3R_30890001 RAL-804 1572 chr3R 30900522 30900553 chr3R 30900601 30900633 15 80 3.0 2.5 2.8 3.9 111 chr3R 30900522 exon Cyp4c3 + chr3R 30900578 3` UTR Cyp4c3 + chr3R 30900633 3` UTR Cyp4c3 + chr3R_15_30900001 chr3R_30900001 RAL-804 1573 chr3R 31000228 31000259 chr3R 31000387 31000390 8 154 5.0 2.0 3.5 1.8 162 chr3R 31000228 intron 5-HT7 - chr3R 31000309 intron 5-HT7 - chr3R 31000390 intron 5-HT7 - chr3R_8_31000001 chr3R_31000001 RAL-804 1574 chr3R 31042120 31042139 chr3R 31042207 31042226 7 87 2.0 4.0 3.0 1.8 106 chr3R 31042120 intron CanA1 + chr3R 31042173 intron CanA1 + chr3R 31042226 intron CanA1 + chr3R_7_31040001 chr3R_31040001 RAL-804 1575 chr3R 31279372 31279404 chr3R 31285563 31285595 diver 7 6187 3.5 2.5 3.0 1.8 6223 chr3R 31279372 intergenic not near genes chr3R 31282484 intergenic not near genes chr3R 31285595 intergenic not near genes chr3R_7_31280001 chr3R_31280001 RAL-804 1576 chr3R 31413089 31413120 chr3R 31418289 31418320 copia 8 5199 3.5 3.5 3.5 1.8 5231 chr3R 31413089 intron Gprk2 + chr3R 31415704 intron Gprk2 + chr3R 31418320 intron Gprk2 + chr3R_8_31415001 chr3R_31415001 RAL-804 1577 chr3R 31426886 31426911 chr3R 31426978 31427003 13 90 0.5 2.0 1.2 5.9 117 chr3R 31426886 intron Gprk2 + chr3R 31426944 intron Gprk2 + chr3R 31427003 intron Gprk2 + chr3R_13_31425001 chr3R_31425001 RAL-804 1578 chr3R 31430731 31430746 chr3R 31430815 31430831 6 86 2.0 2.5 2.2 1.9 100 chr3R 31430731 intron Gprk2 + chr3R 31430781 intron Gprk2 + chr3R 31430831 intron Gprk2 + chr3R_6_31430001 chr3R_31430001 RAL-804 1579 chr3R 31435364 31435378 chr3R 31435516 31435530 5 152 4.5 2.0 3.2 1.2 166 chr3R 31435364 intron Gprk2 + chr3R 31435447 intron Gprk2 + chr3R 31435530 intron Gprk2 + chr3R_5_31435001 chr3R_31435001 RAL-804 1580 chr3R 31527955 31527959 chr3R 31528026 31528037 4 76 3.5 5.5 4.5 0.7 82 chr3R 31527955 intergenic not near genes chr3R 31527996 intergenic not near genes chr3R 31528037 intergenic not near genes chr3R_4_31525001 chr3R_31525001 RAL-804 1581 chr3R 31691532 31691562 chr3R 31696298 31696328 Doc 16 4764 2.5 7.5 5.0 2.7 4796 chr3R 31691532 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696328 intergenic not near genes chr3R_16_31690001 chr3R_31690001 RAL-804 1582 chr3R 31723228 31723256 chr3R 31723474 31723499 21 246 2.5 3.0 2.8 5.5 271 chr3R 31723228 intron ttk + chr3R 31723364 intron ttk + chr3R 31723499 intron ttk + chr3R_21_31720001 chr3R_31720001 RAL-804 1583 chr3R 31751668 31751697 chr3R 31751810 31751837 4 141 0.0 2.0 1.0 2.0 169 chr3R 31751668 3` UTR CG1910 + chr3R 31751752 3` UTR CG1910 + chr3R 31751837 3` UTR,3` UTR CG1910 +,salt - chr3R_4_31750001 chr3R_31750001 RAL-804 1584 chr3R 31858195 31858206 chr3R 31858298 31858298 5 101 0.0 7.0 3.5 1.1 103 chr3R 31858195 intron heph - chr3R 31858246 intron heph - chr3R 31858298 intron heph - chr3R_5_31855001 chr3R_31855001 RAL-804 1585 chr3R 31858622 31858638 chr3R 31858768 31858795 5 154 1.0 5.0 3.0 1.2 173 chr3R 31858622 intron heph - chr3R 31858708 intron heph - chr3R 31858795 intron heph - chr3R_5_31855001 chr3R_31855001 RAL-804 1586 chr3R 31921109 31921125 chr3R 31921190 31921207 7 87 1.0 6.0 3.5 1.6 98 chr3R 31921109 intron heph - chr3R 31921158 intron heph - chr3R 31921207 intron heph - chr3R_7_31920001 chr3R_31920001 RAL-804 1587 chr3R 31957957 31957988 chr3R 31958044 31958075 4 87 0.0 1.0 0.5 2.7 118 chr3R 31957957 intron heph - chr3R 31958016 intron heph - chr3R 31958075 intron heph - chr3R_4_31955001 chr3R_31955001 RAL-804 1588 chr3R 31963225 31963248 chr3R 31963367 31963390 13 142 2.0 3.5 2.8 3.4 165 chr3R 31963225 intron heph - chr3R 31963308 intron heph - chr3R 31963390 intron heph - chr3R_13_31960001 chr3R_31960001 RAL-804 1589 chr3R 31997997 31998024 chr3R 32005467 32005494 blood 11 7470 1.5 2.5 2.0 3.7 7497 chr3R 31997997 intron heph - chr3R 32001746 intron heph - chr3R 32005494 intron heph - chr3R_11_32000001 chr3R_32000001 RAL-804 1590 chr4 76499 76514 chr4 81941 81953 I-element 4 5442 4.0 0.5 2.2 1.2 5454 chr4 76499 intron pan + chr4 79226 intron pan + chr4 81953 intron pan + chr4_4_75001 chr4_75001 RAL-804 1591 chr4 257406 257438 chr4 257576 257608 6 170 1.0 1.0 1.0 3.0 202 chr4 257406 intron RhoGAP102A + chr4 257507 intron RhoGAP102A + chr4 257608 intron RhoGAP102A + chr4_6_255001 chr4_255001 RAL-804 1592 chr4 319993 320018 chr4 328169 328194 Stalker2 4 8176 0.5 1.0 0.8 2.2 8201 chr4 319993 3` UTR CG32850 + chr4 324094 intron CG32850 + chr4 328194 3` UTR,3` UTR CG32850 +,PMCA - chr4_4_320001 chr4_320001 RAL-804 1593 chr4 521334 521346 chr4 521412 521424 5 78 4.5 2.0 3.2 1.2 90 chr4 521334 intron zfh2 + chr4 521379 intron zfh2 + chr4 521424 intron zfh2 + chr4_5_520001 chr4_520001 RAL-804 1594 chr4 671605 671635 chr4 680188 680218 Tirant 8 8581 5.0 3.0 4.0 1.6 8613 chr4 671605 intron CG11360 + chr4 675912 intron CG11360 + chr4 680218 intron CG11360 + chr4_8_675001 chr4_675001 RAL-804 1595 chr4 824641 824663 chr4 824732 824754 5 91 0.5 1.0 0.8 2.8 113 chr4 824641 intron Sox102F - chr4 824698 intron Sox102F - chr4 824754 intron Sox102F - chr4_5_820001 chr4_820001 RAL-804 1596 chr4 1121897 1121910 chr4 1121977 1121990 5 78 0.5 0.5 0.5 3.3 93 chr4 1121897 intron Cals - chr4 1121944 intron Cals - chr4 1121990 intron Cals - chr4_5_1120001 chr4_1120001 RAL-804 1597 chrX 264190 264214 chrX 264276 264303 5 88 2.0 3.0 2.5 1.4 113 chrX 264190 intron CR43906 + chrX 264246 intron CR43906 + chrX 264303 intron CR43906 + chrX_5_260001 chrX_260001 RAL-804 1598 chrX 295856 295881 chrX 303476 303501 412 6 7620 2.5 1.5 2.0 2.0 7645 chrX 295856 intron CG3777 + chrX 299678 intron CG3777 + chrX 303501 intron CG3777 + chrX_6_295001 chrX_295001 RAL-804 1599 chrX 318475 318501 chrX 323561 323587 flea 4 5086 2.0 2.0 2.0 1.3 5112 chrX 318475 intron,intron CG3777 +,CG32816 - chrX 321031 intron,intron CG3777 +,CG32816 - chrX 323587 intron,intron CG3777 +,CG32816 - chrX_4_320001 chrX_320001 RAL-804 1600 chrX 428423 428446 chrX 434608 434631 3S18 8 6185 2.0 1.0 1.5 3.2 6208 chrX 428423 intron CG32816 - chrX 431527 intron CG32816 - chrX 434631 intron CG32816 - chrX_8_430001 chrX_430001 RAL-804 1601 chrX 447288 447299 chrX 447443 447454 6 154 2.0 6.5 4.2 1.2 166 chrX 447288 intron CG32816 - chrX 447371 intron CG32816 - chrX 447454 intron CG32816 - chrX_6_445001 chrX_445001 RAL-804 1602 chrX 450375 450389 chrX 450453 450467 4 78 0.5 4.0 2.2 1.2 92 chrX 450375 intron CG32816 - chrX 450421 intron CG32816 - chrX 450467 intron CG32816 - chrX_4_450001 chrX_450001 RAL-804 1603 chrX 551440 551447 chrX 559001 559009 412 4 7562 3.0 4.0 3.5 0.9 7569 chrX 551440 intron Appl + chrX 555224 intron Appl + chrX 559009 intron Appl + chrX_4_555001 chrX_555001 RAL-804 1604 chrX 667652 667680 chrX 667736 667764 4 84 0.5 1.5 1.0 2.0 112 chrX 667652 intergenic not near genes chrX 667708 intergenic not near genes chrX 667764 intergenic not near genes chrX_4_665001 chrX_665001 RAL-804 1605 chrX 670263 670290 chrX 670342 670369 6 79 0.5 3.5 2.0 2.0 106 chrX 670263 intergenic not near genes chrX 670316 intergenic not near genes chrX 670369 intergenic not near genes chrX_6_670001 chrX_670001 RAL-804 1606 chrX 680837 680870 chrX 680920 680939 8 80 4.0 3.0 3.5 1.8 102 chrX 680837 intergenic not near genes chrX 680888 intergenic not near genes chrX 680939 intergenic not near genes chrX_8_680001 chrX_680001 RAL-804 1607 chrX 706803 706825 chrX 707166 707189 8 364 0.0 4.0 2.0 2.7 386 chrX 706803 intron sdk + chrX 706996 intron sdk + chrX 707189 intron sdk + chrX_8_705001 chrX_705001 RAL-804 1608 chrX 718343 718358 chrX 718423 718438 9 80 0.5 4.0 2.2 2.8 95 chrX 718343 intron sdk + chrX 718390 intron sdk + chrX 718438 intron sdk + chrX_9_715001 chrX_715001 RAL-804 1609 chrX 778133 778160 chrX 778221 778250 7 90 2.0 0.0 1.0 3.5 117 chrX 778133 intron fz3 + chrX 778192 intron fz3 + chrX 778250 intron fz3 + chrX_7_775001 chrX_775001 RAL-804 1610 chrX 780593 780603 chrX 780669 780678 7 75 2.0 0.0 1.0 3.5 85 chrX 780593 intron fz3 + chrX 780636 intron fz3 + chrX 780678 intron fz3 + chrX_7_780001 chrX_780001 RAL-804 1611 chrX 806786 806815 chrX 806882 806911 4 96 1.5 2.5 2.0 1.3 125 chrX 806786 intron Sec22 + chrX 806848 intron Sec22 + chrX 806911 intron Sec22 + chrX_4_805001 chrX_805001 RAL-804 1612 chrX 827599 827619 chrX 835391 835411 roo 5 7792 3.0 0.0 1.5 2.0 7812 chrX 827599 intron CG43867 - chrX 831505 intron CG43867 - chrX 835411 intron CG43867 - chrX_5_830001 chrX_830001 RAL-804 1613 chrX 885834 885861 chrX 886046 886073 13 212 2.0 0.5 1.2 5.9 239 chrX 885834 intron CG43867 - chrX 885954 intron CG43867 - chrX 886073 intron CG43867 - chrX_13_885001 chrX_885001 RAL-804 1614 chrX 906702 906733 chrX 908491 908522 S-element 13 1788 2.5 4.5 3.5 2.9 1820 chrX 906702 intron CG43867 - chrX 907612 intron CG43867 - chrX 908522 intron CG43867 - chrX_13_905001 chrX_905001 RAL-804 1615 chrX 986158 986190 chrX 986240 986272 11 81 3.5 3.5 3.5 2.4 114 chrX 986158 intergenic not near genes chrX 986215 intergenic not near genes chrX 986272 intergenic not near genes chrX_11_985001 chrX_985001 RAL-804 1616 chrX 1153191 1153215 chrX 1153274 1153298 6 83 2.5 3.0 2.8 1.6 107 chrX 1153191 intergenic not near genes chrX 1153244 intergenic not near genes chrX 1153298 intergenic not near genes chrX_6_1150001 chrX_1150001 RAL-804 1617 chrX 1163300 1163313 chrX 1163375 1163390 5 77 2.0 3.5 2.8 1.3 90 chrX 1163300 intergenic CG34320 - chrX 1163345 intergenic CG34320 - chrX 1163390 intergenic CG34320 - chrX_5_1160001 chrX_1160001 RAL-804 1618 chrX 1185565 1185593 chrX 1185644 1185672 7 79 1.0 2.5 1.8 2.5 107 chrX 1185565 intron CG14626 + chrX 1185618 intron CG14626 + chrX 1185672 intron CG14626 + chrX_7_1185001 chrX_1185001 RAL-804 1619 chrX 1253736 1253761 chrX 1253818 1253843 10 82 1.5 4.0 2.8 2.6 107 chrX 1253736 intron Atf3 - chrX 1253790 intron Atf3 - chrX 1253843 intron Atf3 - chrX_10_1250001 chrX_1250001 RAL-804 1620 chrX 1402273 1402294 chrX 1402631 1402652 7 357 3.5 4.5 4.0 1.4 379 chrX 1402273 intergenic not near genes chrX 1402462 intergenic not near genes chrX 1402652 intergenic not near genes chrX_7_1400001 chrX_1400001 RAL-804 1621 chrX 1428594 1428626 chrX 1428680 1428712 5 86 1.5 1.5 1.5 2.0 118 chrX 1428594 intron futsch + chrX 1428653 intron futsch + chrX 1428712 intron futsch + chrX_5_1425001 chrX_1425001 RAL-804 1622 chrX 1518044 1518074 chrX 1523439 1523475 jockey 8 5400 2.5 4.5 3.5 1.8 5431 chrX 1518044 intergenic inc + chrX 1520760 intergenic not near genes chrX 1523475 intergenic not near genes chrX_8_1520001 chrX_1520001 RAL-804 1623 chrX 1560683 1560686 chrX 1560755 1560758 4 80 2.0 1.0 1.5 1.6 75 chrX 1560683 intron Mur2B - chrX 1560720 intron Mur2B - chrX 1560758 intron Mur2B - chrX_4_1560001 chrX_1560001 RAL-804 1624 chrX 1627983 1628003 chrX 1635451 1635469 gtwin 7 7465 2.5 6.0 4.2 1.3 7486 chrX 1627983 intron,intron Mur2B -,br + chrX 1631726 intron,intron Mur2B -,br + chrX 1635469 intron,intron Mur2B -,br + chrX_7_1630001 chrX_1630001 RAL-804 1625 chrX 1674857 1674875 chrX 1674932 1674951 5 76 2.5 0.0 1.2 2.3 94 chrX 1674857 3` UTR CG32809 - chrX 1674904 3` UTR CG32809 - chrX 1674951 3` UTR CG32809 - chrX_5_1670001 chrX_1670001 RAL-804 1626 chrX 1930539 1930550 chrX 1938110 1938115 opus 4 7569 1.5 0.5 1.0 2.0 7576 chrX 1930539 intergenic CG11596 + chrX 1934327 intergenic not near genes chrX 1938115 3` UTR CG3857 - chrX_4_1930001 chrX_1930001 RAL-804 1627 chrX 1982803 1982825 chrX 1982908 1982930 4 102 2.5 4.5 3.5 0.9 127 chrX 1982803 intron Hr4 + chrX 1982866 intron Hr4 + chrX 1982930 intron Hr4 + chrX_4_1980001 chrX_1980001 RAL-804 1628 chrX 2124733 2124743 chrX 2124925 2124938 5 194 2.0 3.0 2.5 1.4 205 chrX 2124733 intergenic not near genes chrX 2124836 intergenic not near genes chrX 2124938 intergenic not near genes chrX_5_2120001 chrX_2120001 RAL-804 1629 chrX 2142161 2142169 chrX 2142239 2142247 4 78 2.0 2.0 2.0 1.3 86 chrX 2142161 intron CG3835 + chrX 2142204 intron CG3835 + chrX 2142247 intron CG3835 + chrX_4_2140001 chrX_2140001 RAL-804 1630 chrX 2399843 2399869 chrX 2408188 2408196 roo 8 8346 4.0 1.5 2.8 2.1 8353 chrX 2399843 intergenic not near genes chrX 2404020 intergenic not near genes chrX 2408196 intergenic not near genes chrX_8_2400001 chrX_2400001 RAL-804 1631 chrX 2578815 2578828 chrX 2578919 2578932 6 104 3.5 3.5 3.5 1.3 117 chrX 2578815 intergenic Pdfr +,Vha36-3 - chrX 2578874 intergenic Vha36-3 -,Pdfr + chrX 2578932 intergenic Vha36-3 -,Pdfr + chrX_6_2575001 chrX_2575001 RAL-804 1632 chrX 2664382 2664414 chrX 2665528 2665560 1360 7 1146 0.5 0.5 0.5 4.7 1178 chrX 2664382 intron sgg + chrX 2664971 intron sgg + chrX 2665560 intron sgg + chrX_7_2660001 chrX_2660001 RAL-804 1633 chrX 2797602 2797632 chrX 2797680 2797710 10 77 3.0 2.0 2.5 2.9 108 chrX 2797602 intron kirre + chrX 2797656 intron kirre + chrX 2797710 intron kirre + chrX_10_2795001 chrX_2795001 RAL-804 1634 chrX 2844913 2844930 chrX 2852323 2852340 mdg1 5 7410 1.0 2.0 1.5 2.0 7427 chrX 2844913 intron kirre + chrX 2848626 intron kirre + chrX 2852340 intron kirre + chrX_5_2845001 chrX_2845001 RAL-804 1635 chrX 2888115 2888145 chrX 2888193 2888223 11 77 1.5 3.0 2.2 3.4 108 chrX 2888115 intron kirre + chrX 2888169 intron kirre + chrX 2888223 intron kirre + chrX_11_2885001 chrX_2885001 RAL-804 1636 chrX 3038737 3038769 chrX 3038825 3038857 8 88 2.5 3.0 2.8 2.1 120 chrX 3038737 intron kirre + chrX 3038797 intron kirre + chrX 3038857 intron kirre + chrX_8_3035001 chrX_3035001 RAL-804 1637 chrX 3196917 3196942 chrX 3197280 3197305 8 363 2.0 2.0 2.0 2.7 388 chrX 3196917 intron dnc + chrX 3197111 intron dnc + chrX 3197305 intron dnc + chrX_8_3195001 chrX_3195001 RAL-804 1638 chrX 3415021 3415048 chrX 3421206 3421233 3S18 6 6184 0.5 1.0 0.8 3.3 6212 chrX 3415021 intron,intron CR44999 +,CG12535 - chrX 3418127 intron,intron CR44999 +,CG12535 - chrX 3421233 intron,intron CR44999 +,CG12535 - chrX_6_3415001 chrX_3415001 RAL-804 1639 chrX 3459983 3459998 chrX 3460060 3460075 4 77 4.5 1.5 3.0 1.0 92 chrX 3459983 intron,intron CR44999 +,CG16782 - chrX 3460029 intron,5` UTR CR44999 +,CG16782 - chrX 3460075 intron,5` UTR CR44999 +,CG16782 - chrX_4_3460001 chrX_3460001 RAL-804 1640 chrX 3535404 3535432 chrX 3535495 3535523 6 90 3.5 1.5 2.5 1.7 119 chrX 3535404 intron CG32791 - chrX 3535464 intron CG32791 - chrX 3535523 intron CG32791 - chrX_6_3535001 chrX_3535001 RAL-804 1641 chrX 3597552 3597572 chrX 3619720 3619740 roo 8 22168 2.0 1.5 1.8 2.9 22188 chrX 3597552 intron AstA-R1 + chrX 3608646 intron AstA-R1 + chrX 3619740 intron AstA-R1 + chrX_8_3605001 chrX_3605001 RAL-804 1642 chrX 3629848 3629880 chrX 3629933 3629965 6 85 0.5 0.0 0.2 5.0 117 chrX 3629848 intron AstA-R1 + chrX 3629906 intron AstA-R1 + chrX 3629965 intron AstA-R1 + chrX_6_3625001 chrX_3625001 RAL-804 1643 chrX 3630550 3630574 chrX 3630620 3630650 10 74 2.0 1.5 1.8 3.6 100 chrX 3630550 intron AstA-R1 + chrX 3630600 intron AstA-R1 + chrX 3630650 intron AstA-R1 + chrX_10_3630001 chrX_3630001 RAL-804 1644 chrX 3662480 3662520 chrX 3662562 3662603 5 82 4.5 1.0 2.8 1.3 123 chrX 3662480 intron AstA-R1 + chrX 3662542 intron AstA-R1 + chrX 3662603 intron AstA-R1 + chrX_5_3660001 chrX_3660001 RAL-804 1645 chrX 3726761 3726791 chrX 3730157 3730176 NOF 6 3393 0.5 2.5 1.5 2.4 3415 chrX 3726761 intron tlk + chrX 3728468 intron tlk + chrX 3730176 intron tlk + chrX_6_3725001 chrX_3725001 RAL-804 1646 chrX 3880461 3880487 chrX 3880547 3880573 5 86 1.0 0.0 0.5 3.3 112 chrX 3880461 intergenic VhaAC39-1 + chrX 3880517 intergenic VhaAC39-1 + chrX 3880573 intergenic VhaAC39-1 + chrX_5_3880001 chrX_3880001 RAL-804 1647 chrX 3881272 3881305 chrX 3881411 3881444 8 139 3.5 3.5 3.5 1.8 172 chrX 3881272 intron VhaAC39-1 + chrX 3881358 intron VhaAC39-1 + chrX 3881444 intron VhaAC39-1 + chrX_8_3880001 chrX_3880001 RAL-804 1648 chrX 3915520 3915525 chrX 3915606 3915612 4 87 2.5 1.5 2.0 1.3 92 chrX 3915520 intron CG42541 - chrX 3915566 intron CG42541 - chrX 3915612 intron CG42541 - chrX_4_3915001 chrX_3915001 RAL-804 1649 chrX 3986867 3986893 chrX 3994500 3994525 412 8 7633 3.5 1.0 2.2 2.5 7658 chrX 3986867 intergenic not near genes chrX 3990696 intergenic not near genes chrX 3994525 intergenic not near genes chrX_8_3990001 chrX_3990001 RAL-804 1650 chrX 4048501 4048528 chrX 4048577 4048604 6 76 4.0 1.0 2.5 1.7 103 chrX 4048501 3` UTR CR45482 - chrX 4048552 3` UTR CR45482 - chrX 4048604 3` UTR CR45482 - chrX_6_4045001 chrX_4045001 RAL-804 1651 chrX 4157893 4157922 chrX 4164927 4164957 297 9 7035 2.5 5.0 3.8 1.9 7064 chrX 4157893 intron Fas2 - chrX 4161425 intron Fas2 - chrX 4164957 intron Fas2 - chrX_9_4160001 chrX_4160001 RAL-804 1652 chrX 4499605 4499630 chrX 4499797 4499821 4 191 2.0 3.0 2.5 1.1 216 chrX 4499605 intron CR32773 - chrX 4499713 intron CR32773 - chrX 4499821 intron CR32773 - chrX_4_4495001 chrX_4495001 RAL-804 1653 chrX 4693764 4693780 chrX 4693846 4693875 5 92 0.5 1.0 0.8 2.8 111 chrX 4693764 intron ctp + chrX 4693820 intron ctp + chrX 4693875 intron ctp + chrX_5_4690001 chrX_4690001 RAL-804 1654 chrX 4700392 4700417 chrX 4700735 4700760 jockey 9 343 1.0 1.5 1.2 4.1 368 chrX 4700392 3` UTR ctp + chrX 4700576 3` UTR ctp + chrX 4700760 3` UTR ctp + chrX_9_4700001 chrX_4700001 RAL-804 1655 chrX 4731818 4731826 chrX 4736911 4736919 jockey 6 5093 8.5 7.0 7.8 0.7 5101 chrX 4731818 intergenic not near genes chrX 4734368 intergenic not near genes chrX 4736919 intergenic not near genes chrX_6_4730001 chrX_4730001 RAL-804 1656 chrX 4737792 4737797 chrX 4738398 4738410 4 611 1.5 5.5 3.5 0.9 618 chrX 4737792 intergenic not near genes chrX 4738101 intergenic not near genes chrX 4738410 intergenic not near genes chrX_4_4735001 chrX_4735001 RAL-804 1657 chrX 4744799 4744810 chrX 4744884 4744895 4 85 5.0 4.0 4.5 0.7 96 chrX 4744799 intergenic not near genes chrX 4744847 intergenic not near genes chrX 4744895 intergenic not near genes chrX_4_4740001 chrX_4740001 RAL-804 1658 chrX 4763251 4763277 chrX 4763738 4763765 Stalker4 8 486 3.5 1.5 2.5 2.3 514 chrX 4763251 intergenic not near genes chrX 4763508 intergenic not near genes chrX 4763765 intergenic not near genes chrX_8_4760001 chrX_4760001 RAL-804 1659 chrX 4792381 4792408 chrX 4792811 4792841 jockey 7 426 2.5 4.5 3.5 1.6 460 chrX 4792381 intergenic not near genes chrX 4792611 intergenic not near genes chrX 4792841 intergenic not near genes chrX_7_4790001 chrX_4790001 RAL-804 1660 chrX 4827975 4827997 chrX 4835344 4835345 Stalker4 4 7359 3.0 3.5 3.2 1.0 7370 chrX 4827975 intergenic not near genes chrX 4831660 intergenic not near genes chrX 4835345 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-804 1661 chrX 4883367 4883388 chrX 4883752 4883773 4 385 3.0 1.5 2.2 1.2 406 chrX 4883367 intron CG42594 + chrX 4883570 intron CG42594 + chrX 4883773 intron CG42594 + chrX_4_4880001 chrX_4880001 RAL-804 1662 chrX 4885779 4885806 chrX 4885864 4885873 11 82 2.5 2.5 2.5 3.1 94 chrX 4885779 intron CG42594 + chrX 4885826 intron CG42594 + chrX 4885873 intron CG42594 + chrX_11_4885001 chrX_4885001 RAL-804 1663 chrX 4893364 4893391 chrX 4893633 4893660 7 269 2.0 1.0 1.5 2.8 296 chrX 4893364 intron CG42594 + chrX 4893512 intron CG42594 + chrX 4893660 intron CG42594 + chrX_7_4890001 chrX_4890001 RAL-804 1664 chrX 4965557 4965588 chrX 4965637 4965668 10 80 0.0 1.5 0.8 5.6 111 chrX 4965557 intron CR44833 - chrX 4965612 intron CR44833 - chrX 4965668 intron CR44833 - chrX_10_4965001 chrX_4965001 RAL-804 1665 chrX 4990051 4990069 chrX 4997265 4997282 roo 8 7213 2.0 1.5 1.8 2.9 7231 chrX 4990051 intron CR44833 - chrX 4993666 intron CR44833 - chrX 4997282 intron CR44833 - chrX_8_4990001 chrX_4990001 RAL-804 1666 chrX 5096275 5096304 chrX 5103840 5103859 springer 4 7559 1.0 2.0 1.5 1.6 7584 chrX 5096275 intron,intron CG15465 +,rg + chrX 5100067 intron,intron CG15465 +,rg + chrX 5103859 intron,intron CG15465 +,rg + chrX_4_5100001 chrX_5100001 RAL-804 1667 chrX 5131399 5131431 chrX 5131480 5131506 16 77 4.0 3.5 3.8 3.3 107 chrX 5131399 intron,intron CG15465 +,rg + chrX 5131452 intron,intron CG15465 +,rg + chrX 5131506 intron,intron CG15465 +,rg + chrX_16_5130001 chrX_5130001 RAL-804 1668 chrX 5134798 5134827 chrX 5134899 5134928 10 101 2.0 2.5 2.2 3.1 130 chrX 5134798 intron,intron CG15465 +,rg + chrX 5134863 intron,intron CG15465 +,rg + chrX 5134928 intron,intron CG15465 +,rg + chrX_10_5130001 chrX_5130001 RAL-804 1669 chrX 5159726 5159736 chrX 5159820 5159830 4 94 3.0 1.5 2.2 1.2 104 chrX 5159726 intron,intron CG15465 +,rg + chrX 5159778 intron,intron CG15465 +,rg + chrX 5159830 intron,intron CG15465 +,rg + chrX_4_5155001 chrX_5155001 RAL-804 1670 chrX 5206303 5206330 chrX 5206576 5206603 13 272 0.5 4.0 2.2 4.1 300 chrX 5206303 intron,intron CG15465 +,rg + chrX 5206453 intron,intron CG15465 +,rg + chrX 5206603 intron,intron CG15465 +,rg + chrX_13_5205001 chrX_5205001 RAL-804 1671 chrX 5350304 5350312 chrX 5350413 5350417 4 108 3.5 5.0 4.2 0.8 113 chrX 5350304 intron SK + chrX 5350360 intron SK + chrX 5350417 intron SK + chrX_4_5350001 chrX_5350001 RAL-804 1672 chrX 5509095 5509127 chrX 5509187 5509219 11 92 2.5 0.5 1.5 4.4 124 chrX 5509095 intergenic not near genes chrX 5509157 intergenic not near genes chrX 5509219 intergenic not near genes chrX_11_5505001 chrX_5505001 RAL-804 1673 chrX 5798871 5798889 chrX 5799024 5799051 4 160 0.0 3.0 1.5 1.6 180 chrX 5798871 intergenic not near genes chrX 5798961 intergenic not near genes chrX 5799051 intergenic not near genes chrX_4_5795001 chrX_5795001 RAL-804 1674 chrX 5883817 5883832 chrX 5884058 5884073 pogo 4 241 1.5 2.5 2.0 1.3 256 chrX 5883817 intron CR45668 - chrX 5883945 intron CR45668 - chrX 5884073 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-804 1675 chrX 5917495 5917524 chrX 5917575 5917604 4 80 1.0 0.5 0.8 2.2 109 chrX 5917495 5` UTR CG3726 + chrX 5917550 5` UTR CG3726 + chrX 5917604 5` UTR CG3726 + chrX_4_5915001 chrX_5915001 RAL-804 1676 chrX 5989756 5989781 chrX 5989845 5989868 5 88 1.5 2.5 2.0 1.7 112 chrX 5989756 5` UTR CG5966 + chrX 5989812 5` UTR CG5966 + chrX 5989868 5` UTR CG5966 + chrX_5_5985001 chrX_5985001 RAL-804 1677 chrX 6003288 6003303 chrX 6003369 6003384 7 81 0.5 1.5 1.0 3.5 96 chrX 6003288 intron CR44498 + chrX 6003336 intron CR44498 + chrX 6003384 intron CR44498 + chrX_7_6000001 chrX_6000001 RAL-804 1678 chrX 6071141 6071154 chrX 6071354 6071368 5 214 7.0 3.0 5.0 0.8 227 chrX 6071141 intron Tsp5D - chrX 6071254 intron Tsp5D - chrX 6071368 intron Tsp5D - chrX_5_6070001 chrX_6070001 RAL-804 1679 chrX 6171591 6171608 chrX 6179024 6179041 Quasimodo 5 7432 1.5 3.0 2.2 1.6 7450 chrX 6171591 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179041 intron Ca-alpha1T - chrX_5_6175001 chrX_6175001 RAL-804 1680 chrX 6315168 6315192 chrX 6315298 6315322 6 129 1.5 3.0 2.2 1.9 154 chrX 6315168 intron CG15894 + chrX 6315245 intron CG15894 + chrX 6315322 intron CG15894 + chrX_6_6315001 chrX_6315001 RAL-804 1681 chrX 6335224 6335244 chrX 6337734 6337754 Tirant 4 2510 0.0 4.0 2.0 1.3 2530 chrX 6335224 intergenic not near genes chrX 6336489 intergenic not near genes chrX 6337754 intergenic CG3842 + chrX_4_6335001 chrX_6335001 RAL-804 1682 chrX 6392879 6392899 chrX 6397643 6397664 Doc 6 4764 1.5 6.5 4.0 1.2 4785 chrX 6392879 intergenic not near genes chrX 6395272 intergenic not near genes chrX 6397664 intergenic not near genes chrX_6_6395001 chrX_6395001 RAL-804 1683 chrX 6425006 6425030 chrX 6425563 6425587 15 559 19.5 27.5 23.5 0.6 581 chrX 6425006 intron CG42340 - chrX 6425296 intron CG42340 - chrX 6425587 intron CG42340 - chrX_15_6425001 chrX_6425001 RAL-804 1684 chrX 6550028 6550046 chrX 6550350 6550368 5 322 3.5 1.5 2.5 1.4 340 chrX 6550028 intron CG34417 + chrX 6550198 intron CG34417 + chrX 6550368 intron CG34417 + chrX_5_6550001 chrX_6550001 RAL-804 1685 chrX 6562821 6562849 chrX 6571303 6571330 Tirant 11 8475 2.5 2.5 2.5 3.1 8509 chrX 6562821 intron CG34417 + chrX 6567076 intron CG34417 + chrX 6571330 intron CG34417 + chrX_11_6565001 chrX_6565001 RAL-804 1686 chrX 6737524 6737551 chrX 6737600 6737633 10 78 1.5 4.5 3.0 2.5 109 chrX 6737524 intron CG3168 - chrX 6737578 intron CG3168 - chrX 6737633 intron CG3168 - chrX_10_6735001 chrX_6735001 RAL-804 1687 chrX 6859570 6859574 chrX 6859981 6859987 4 412 4.0 0.0 2.0 1.3 417 chrX 6859570 intron CG14434 - chrX 6859778 intron CG14434 - chrX 6859987 intron CG14434 - chrX_4_6855001 chrX_6855001 RAL-804 1688 chrX 6897689 6897708 chrX 6897799 6897818 6 110 1.0 2.0 1.5 2.4 129 chrX 6897689 intergenic not near genes chrX 6897754 intergenic not near genes chrX 6897818 intergenic not near genes chrX_6_6895001 chrX_6895001 RAL-804 1689 chrX 6979533 6979558 chrX 6979974 6980000 7 439 2.0 2.0 2.0 2.3 467 chrX 6979533 intron ogre - chrX 6979766 intron ogre - chrX 6980000 intron ogre - chrX_7_6975001 chrX_6975001 RAL-804 1690 chrX 6989508 6989529 chrX 6989594 6989616 8 87 3.0 1.5 2.2 2.5 108 chrX 6989508 intron ogre - chrX 6989562 intron ogre - chrX 6989616 intron ogre - chrX_8_6985001 chrX_6985001 RAL-804 1691 chrX 7023600 7023633 chrX 7030990 7031017 Tabor 7 7386 4.0 1.5 2.8 1.8 7417 chrX 7023600 intron CG12541 - chrX 7027308 intron CG12541 - chrX 7031017 intron CG12541 - chrX_7_7025001 chrX_7025001 RAL-804 1692 chrX 7125243 7125275 chrX 7134402 7134434 roo 8 9159 0.5 4.0 2.2 2.5 9191 chrX 7125243 intergenic not near genes chrX 7129838 intergenic not near genes chrX 7134434 intergenic not near genes chrX_8_7125001 chrX_7125001 RAL-804 1693 chrX 7152400 7152428 chrX 7152489 7152519 6 91 1.5 2.5 2.0 2.0 119 chrX 7152400 intron CG9650 + chrX 7152460 intron CG9650 + chrX 7152519 intron CG9650 + chrX_6_7150001 chrX_7150001 RAL-804 1694 chrX 7345202 7345213 chrX 7345294 7345305 4 92 1.0 1.0 1.0 2.0 103 chrX 7345202 intron,intron CR44357 -,CG1677 - chrX 7345254 intron,intron CR44357 -,CG1677 - chrX 7345305 intron,intron CR44357 -,CG1677 - chrX_4_7345001 chrX_7345001 RAL-804 1695 chrX 7475027 7475056 chrX 7475116 7475146 10 89 1.5 1.0 1.2 4.5 119 chrX 7475027 intergenic not near genes chrX 7475086 intergenic not near genes chrX 7475146 intergenic not near genes chrX_10_7475001 chrX_7475001 RAL-804 1696 chrX 7570642 7570668 chrX 7570776 7570801 6 134 0.5 3.0 1.8 2.1 159 chrX 7570642 intergenic not near genes chrX 7570722 intergenic not near genes chrX 7570801 intergenic not near genes chrX_6_7570001 chrX_7570001 RAL-804 1697 chrX 7702908 7702931 chrX 7703347 7703370 jockey 12 439 4.5 3.0 3.8 2.5 462 chrX 7702908 intron CHES-1-like - chrX 7703139 intron CHES-1-like - chrX 7703370 intron CHES-1-like - chrX_12_7700001 chrX_7700001 RAL-804 1698 chrX 7720564 7720583 chrX 7720643 7720665 5 81 1.5 3.5 2.5 1.4 101 chrX 7720564 intergenic not near genes chrX 7720614 intergenic not near genes chrX 7720665 intergenic not near genes chrX_5_7720001 chrX_7720001 RAL-804 1699 chrX 7793233 7793256 chrX 7793312 7793335 6 79 4.0 2.0 3.0 1.5 102 chrX 7793233 intergenic not near genes chrX 7793284 intergenic not near genes chrX 7793335 intergenic not near genes chrX_6_7790001 chrX_7790001 RAL-804 1700 chrX 7845725 7845755 chrX 7847215 7847246 hopper2 6 1491 5.0 3.0 4.0 1.2 1521 chrX 7845725 intergenic not near genes chrX 7846486 intergenic not near genes chrX 7847246 intergenic not near genes chrX_6_7845001 chrX_7845001 RAL-804 1701 chrX 8079916 8079939 chrX 8080026 8080049 8 110 2.5 2.5 2.5 2.3 133 chrX 8079916 exon CG2254 - chrX 8079982 intron CG2254 - chrX 8080049 intron CG2254 - chrX_8_8075001 chrX_8075001 RAL-804 1702 chrX 8092287 8092321 chrX 8092372 8092406 7 85 2.0 0.5 1.2 3.2 119 chrX 8092287 intron Ubc-E2H - chrX 8092346 intron Ubc-E2H - chrX 8092406 intron Ubc-E2H - chrX_7_8090001 chrX_8090001 RAL-804 1703 chrX 8214400 8214426 chrX 8214492 8214518 7 92 2.0 2.0 2.0 2.3 118 chrX 8214400 intron sdt + chrX 8214459 intron sdt + chrX 8214518 intron sdt + chrX_7_8210001 chrX_8210001 RAL-804 1704 chrX 8421473 8421484 chrX 8421565 8421576 4 92 2.0 3.0 2.5 1.1 103 chrX 8421473 intron Trf2 + chrX 8421524 intron Trf2 + chrX 8421576 intron Trf2 + chrX_4_8420001 chrX_8420001 RAL-804 1705 chrX 8536760 8536778 chrX 8536836 8536854 6 76 5.0 5.5 5.2 1.0 94 chrX 8536760 intron Nrg + chrX 8536807 intron Nrg + chrX 8536854 intron Nrg + chrX_6_8535001 chrX_8535001 RAL-804 1706 chrX 8730448 8730472 chrX 8730523 8730547 4 76 0.0 4.5 2.2 1.2 99 chrX 8730448 intergenic not near genes chrX 8730498 intergenic not near genes chrX 8730547 intergenic not near genes chrX_4_8730001 chrX_8730001 RAL-804 1707 chrX 8885681 8885702 chrX 8885781 8885802 5 100 1.5 2.0 1.8 1.8 121 chrX 8885681 intron Moe - chrX 8885742 intron Moe - chrX 8885802 intron Moe - chrX_5_8885001 chrX_8885001 RAL-804 1708 chrX 8894100 8894123 chrX 8894201 8894224 6 101 2.0 2.0 2.0 2.0 124 chrX 8894100 intron Moe - chrX 8894162 intron Moe - chrX 8894224 intron Moe - chrX_6_8890001 chrX_8890001 RAL-804 1709 chrX 8922342 8922363 chrX 8922760 8922766 jockey 9 426 1.0 2.0 1.5 3.6 424 chrX 8922342 intron rdgA + chrX 8922554 intron rdgA + chrX 8922766 intron rdgA + chrX_9_8920001 chrX_8920001 RAL-804 1710 chrX 8948771 8948784 chrX 8956281 8956294 roo 5 7510 0.0 3.5 1.8 1.8 7523 chrX 8948771 intron rdgA + chrX 8952532 intron rdgA + chrX 8956294 intron rdgA + chrX_5_8950001 chrX_8950001 RAL-804 1711 chrX 9062724 9062755 chrX 9062802 9062833 4 78 1.5 1.0 1.2 1.8 109 chrX 9062724 intron CG15365 - chrX 9062778 intron CG15365 - chrX 9062833 intron CG15365 - chrX_4_9060001 chrX_9060001 RAL-804 1712 chrX 9152077 9152102 chrX 9152160 9152185 4 83 1.5 2.0 1.8 1.4 108 chrX 9152077 intergenic dalao +,His3.3B - chrX 9152131 intergenic dalao +,His3.3B - chrX 9152185 intergenic dalao +,His3.3B - chrX_4_9150001 chrX_9150001 RAL-804 1713 chrX 9337942 9337973 chrX 9338034 9338065 9 90 1.5 2.5 2.0 3.0 123 chrX 9337942 intron CG34449 - chrX 9338004 intron CG34449 - chrX 9338065 exon CG34449 - chrX_9_9335001 chrX_9335001 RAL-804 1714 chrX 9439434 9439456 chrX 9439511 9439533 4 77 2.5 4.5 3.5 0.9 99 chrX 9439434 intron mgl - chrX 9439484 intron mgl - chrX 9439533 intron mgl - chrX_4_9435001 chrX_9435001 RAL-804 1715 chrX 9508139 9508164 chrX 9509657 9509681 jockey 9 1518 2.0 4.5 3.2 2.1 1542 chrX 9508139 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509681 intron CG32700 - chrX_9_9505001 chrX_9505001 RAL-804 1716 chrX 9575795 9575820 chrX 9576119 9576143 mdg3 8 324 4.5 3.0 3.8 1.7 348 chrX 9575795 intron,exon CG32699 -,CG42395 - chrX 9575969 intron,intron CG32699 -,CG42395 - chrX 9576143 intron,5` UTR CG32699 -,CG42395 - chrX_8_9575001 chrX_9575001 RAL-804 1717 chrX 10065485 10065515 chrX 10065630 10065661 7 146 1.0 0.5 0.8 3.9 176 chrX 10065485 intron CG15312 - chrX 10065573 intron CG15312 - chrX 10065661 intron CG15312 - chrX_7_10065001 chrX_10065001 RAL-804 1718 chrX 10134005 10134036 chrX 10134091 10134122 5 84 0.5 2.5 1.5 2.0 117 chrX 10134005 exon,intron RhoU +,CR44894 - chrX 10134064 exon,intron RhoU +,CR44894 - chrX 10134122 intron,intron RhoU +,CR44894 - chrX_5_10130001 chrX_10130001 RAL-804 1719 chrX 10138215 10138246 chrX 10145719 10145750 412 12 7504 1.0 2.0 1.5 4.8 7535 chrX 10138215 intron,intron RhoU +,CR44894 - chrX 10141982 intron,intron RhoU +,CR44894 - chrX 10145750 intron,intron RhoU +,CR44894 - chrX_12_10140001 chrX_10140001 RAL-804 1720 chrX 10150013 10150025 chrX 10150236 10150248 5 223 3.5 0.0 1.8 1.8 235 chrX 10150013 intron CR44894 - chrX 10150130 intron CR44894 - chrX 10150248 intron CR44894 - chrX_5_10150001 chrX_10150001 RAL-804 1721 chrX 10295257 10295273 chrX 10295656 10295672 6 398 5.5 1.5 3.5 1.3 415 chrX 10295257 intron alpha-Man-I - chrX 10295464 intron alpha-Man-I - chrX 10295672 intron alpha-Man-I - chrX_6_10295001 chrX_10295001 RAL-804 1722 chrX 10361712 10361744 chrX 10361809 10361841 7 97 3.0 2.0 2.5 2.0 129 chrX 10361712 intron l(1)G0289 - chrX 10361776 intron l(1)G0289 - chrX 10361841 intron l(1)G0289 - chrX_7_10360001 chrX_10360001 RAL-804 1723 chrX 10398602 10398630 chrX 10398699 10398727 7 91 1.5 3.0 2.2 2.2 125 chrX 10398602 intron flw + chrX 10398664 intron flw + chrX 10398727 intron flw + chrX_7_10395001 chrX_10395001 RAL-804 1724 chrX 10550856 10550881 chrX 10552322 10552348 hobo 11 1467 1.5 3.5 2.5 3.1 1492 chrX 10550856 intron spri - chrX 10551602 intron spri - chrX 10552348 intron spri - chrX_11_10550001 chrX_10550001 RAL-804 1725 chrX 10686048 10686073 chrX 10691185 10691210 roo 5 5137 2.5 1.5 2.0 1.7 5162 chrX 10686048 intron X11Lbeta + chrX 10688629 intron X11Lbeta + chrX 10691210 intron X11Lbeta + chrX_5_10685001 chrX_10685001 RAL-804 1726 chrX 11051465 11051489 chrX 11051543 11051570 5 78 1.0 2.5 1.8 1.8 105 chrX 11051465 intergenic not near genes chrX 11051518 intergenic not near genes chrX 11051570 intergenic not near genes chrX_5_11050001 chrX_11050001 RAL-804 1727 chrX 11141986 11142063 chrX 11142061 11142139 5 76 0.0 0.0 0.0 5.0 153 chrX 11141986 intergenic CG15199 - chrX 11142062 intergenic CG15199 -,CG15202 + chrX 11142139 intergenic CG15199 -,CG15202 + chrX_5_11140001 chrX_11140001 RAL-804 1728 chrX 11254168 11254203 chrX 11254278 11254312 9 110 2.0 3.0 2.5 2.6 144 chrX 11254168 intron CG44422 - chrX 11254240 intron CG44422 - chrX 11254312 intron CG44422 - chrX_9_11250001 chrX_11250001 RAL-804 1729 chrX 11291687 11291707 chrX 11291769 11291789 4 82 4.5 2.5 3.5 0.9 102 chrX 11291687 intron CG44422 - chrX 11291738 intron CG44422 - chrX 11291789 intron CG44422 - chrX_4_11290001 chrX_11290001 RAL-804 1730 chrX 11312061 11312080 chrX 11319413 11319428 Stalker2 5 7351 5.0 4.0 4.5 0.9 7367 chrX 11312061 intergenic not near genes chrX 11315744 intergenic not near genes chrX 11319428 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-804 1731 chrX 11499115 11499143 chrX 11499192 11499207 4 74 2.0 4.0 3.0 1.0 92 chrX 11499115 intron Drak + chrX 11499161 intron Drak + chrX 11499207 intron Drak + chrX_4_11495001 chrX_11495001 RAL-804 1732 chrX 11633417 11633442 chrX 11640471 11640496 297 5 7054 3.5 4.5 4.0 1.0 7079 chrX 11633417 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640496 intron Ptp10D + chrX_5_11635001 chrX_11635001 RAL-804 1733 chrX 12240659 12240697 chrX 12240757 12240794 8 98 0.5 1.0 0.8 4.4 135 chrX 12240659 intron Ten-a + chrX 12240726 intron Ten-a + chrX 12240794 intron Ten-a + chrX_8_12240001 chrX_12240001 RAL-804 1734 chrX 12301956 12301976 chrX 12303262 12303276 X-element 7 1303 2.0 2.5 2.2 2.2 1320 chrX 12301956 intron Ten-a + chrX 12302616 intron Ten-a + chrX 12303276 intron Ten-a + chrX_7_12300001 chrX_12300001 RAL-804 1735 chrX 12350771 12350801 chrX 12350852 12350882 8 81 3.0 0.5 1.8 2.9 111 chrX 12350771 intergenic not near genes chrX 12350826 intergenic not near genes chrX 12350882 intergenic not near genes chrX_8_12350001 chrX_12350001 RAL-804 1736 chrX 12375499 12375513 chrX 12375597 12375611 4 98 3.0 2.0 2.5 1.1 112 chrX 12375499 intergenic Ir11a - chrX 12375555 intergenic Ir11a - chrX 12375611 exon Ir11a - chrX_4_12375001 chrX_12375001 RAL-804 1737 chrX 12532649 12532658 chrX 12532795 12532801 6 146 3.0 0.0 1.5 2.4 152 chrX 12532649 intron CG43921 - chrX 12532725 intron CG43921 - chrX 12532801 intron CG43921 - chrX_6_12530001 chrX_12530001 RAL-804 1738 chrX 12823199 12823213 chrX 12823276 12823290 4 77 2.0 0.0 1.0 2.0 91 chrX 12823199 intron Pde9 - chrX 12823244 intron Pde9 - chrX 12823290 intron Pde9 - chrX_4_12820001 chrX_12820001 RAL-804 1739 chrX 12960763 12960799 chrX 12960844 12960880 5 81 2.0 2.5 2.2 1.6 117 chrX 12960763 3` UTR CG32642 + chrX 12960822 intergenic CG32642 + chrX 12960880 intergenic CG32642 + chrX_5_12960001 chrX_12960001 RAL-804 1740 chrX 13172350 13172380 chrX 13172426 13172456 9 75 1.0 2.5 1.8 3.2 106 chrX 13172350 exon CG34411 - chrX 13172403 intron CG34411 - chrX 13172456 intron CG34411 - chrX_9_13170001 chrX_13170001 RAL-804 1741 chrX 13278150 13278178 chrX 13278233 13278261 4 83 1.0 0.0 0.5 2.7 111 chrX 13278150 intron HDAC4 - chrX 13278206 intron HDAC4 - chrX 13278261 intron HDAC4 - chrX_4_13275001 chrX_13275001 RAL-804 1742 chrX 13429468 13429493 chrX 13430617 13430642 jockey 7 1148 2.5 3.0 2.8 1.8 1174 chrX 13429468 intergenic not near genes chrX 13430055 intergenic not near genes chrX 13430642 intergenic not near genes chrX_7_13430001 chrX_13430001 RAL-804 1743 chrX 13843387 13843409 chrX 13843540 13843562 9 153 2.5 1.5 2.0 3.0 175 chrX 13843387 intron AMPdeam - chrX 13843474 intron AMPdeam - chrX 13843562 intron AMPdeam - chrX_9_13840001 chrX_13840001 RAL-804 1744 chrX 13875965 13875974 chrX 13876049 13876058 5 84 1.0 0.5 0.8 2.8 93 chrX 13875965 intron mamo - chrX 13876012 intron mamo - chrX 13876058 intron mamo - chrX_5_13875001 chrX_13875001 RAL-804 1745 chrX 13937993 13938006 chrX 13941264 13941277 I-element 4 3271 2.0 3.0 2.5 1.1 3284 chrX 13937993 intron mamo - chrX 13939635 intron mamo - chrX 13941277 intron mamo - chrX_4_13935001 chrX_13935001 RAL-804 1746 chrX 14075530 14075561 chrX 14075625 14075656 10 94 5.0 1.0 3.0 2.5 126 chrX 14075530 intergenic not near genes chrX 14075593 intergenic not near genes chrX 14075656 intergenic not near genes chrX_10_14075001 chrX_14075001 RAL-804 1747 chrX 14081984 14082005 chrX 14082278 14082300 5 295 1.0 4.5 2.8 1.3 316 chrX 14081984 intergenic not near genes chrX 14082142 intergenic not near genes chrX 14082300 intergenic not near genes chrX_5_14080001 chrX_14080001 RAL-804 1748 chrX 14105021 14105038 chrX 14114172 14114189 roo 4 9150 5.0 1.5 3.2 1.0 9168 chrX 14105021 intergenic not near genes chrX 14109605 intergenic not near genes chrX 14114189 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-804 1749 chrX 14131491 14131523 chrX 14131568 14131604 9 76 0.5 2.5 1.5 3.6 113 chrX 14131491 intergenic not near genes chrX 14131548 intergenic not near genes chrX 14131604 intergenic not near genes chrX_9_14130001 chrX_14130001 RAL-804 1750 chrX 14259817 14259832 chrX 14260036 14260059 6 226 2.0 1.0 1.5 2.4 242 chrX 14259817 intergenic not near genes chrX 14259938 intergenic not near genes chrX 14260059 intergenic not near genes chrX_6_14255001 chrX_14255001 RAL-804 1751 chrX 14371823 14371836 chrX 14371888 14371916 5 76 3.0 0.5 1.8 1.8 93 chrX 14371823 intron dpr8 + chrX 14371870 intron dpr8 + chrX 14371916 intron dpr8 + chrX_5_14370001 chrX_14370001 RAL-804 1752 chrX 14484972 14484986 chrX 14485061 14485075 5 88 0.0 5.0 2.5 1.4 103 chrX 14484972 intergenic not near genes chrX 14485024 intergenic not near genes chrX 14485075 intergenic not near genes chrX_5_14485001 chrX_14485001 RAL-804 1753 chrX 14572879 14572911 chrX 14572967 14572994 6 84 3.0 3.5 3.2 1.4 115 chrX 14572879 intergenic not near genes chrX 14572936 intergenic not near genes chrX 14572994 intergenic not near genes chrX_6_14570001 chrX_14570001 RAL-804 1754 chrX 14636455 14636495 chrX 14641896 14641929 I-element 13 5438 1.0 1.5 1.2 5.9 5474 chrX 14636455 intron NetA - chrX 14639192 intron NetA - chrX 14641929 intron NetA - chrX_13_14635001 chrX_14635001 RAL-804 1755 chrX 14710968 14710981 chrX 14711044 14711072 4 87 0.5 3.0 1.8 1.4 104 chrX 14710968 intron NetB - chrX 14711020 intron NetB - chrX 14711072 intron NetB - chrX_4_14710001 chrX_14710001 RAL-804 1756 chrX 14718145 14718177 chrX 14718233 14718265 9 87 3.0 2.5 2.8 2.4 120 chrX 14718145 intron NetB - chrX 14718205 intron NetB - chrX 14718265 intron NetB - chrX_9_14715001 chrX_14715001 RAL-804 1757 chrX 14771492 14771515 chrX 14771616 14771639 7 122 2.0 0.5 1.2 3.2 147 chrX 14771492 intergenic not near genes chrX 14771566 intergenic not near genes chrX 14771639 intergenic not near genes chrX_7_14770001 chrX_14770001 RAL-804 1758 chrX 14818774 14818797 chrX 14823978 14823985 copia 5 5201 2.5 4.0 3.2 1.2 5211 chrX 14818774 intron rut - chrX 14821380 intron rut - chrX 14823985 intron rut - chrX_5_14820001 chrX_14820001 RAL-804 1759 chrX 14900079 14900087 chrX 14900166 14900174 4 87 0.5 0.0 0.2 3.3 95 chrX 14900079 intron Flo2 + chrX 14900126 intron Flo2 + chrX 14900174 intron Flo2 + chrX_4_14900001 chrX_14900001 RAL-804 1760 chrX 14981705 14981731 chrX 14981784 14981810 6 79 1.5 0.0 0.8 3.3 105 chrX 14981705 intron eag + chrX 14981758 intron eag + chrX 14981810 intron eag + chrX_6_14980001 chrX_14980001 RAL-804 1761 chrX 15228497 15228520 chrX 15228740 15228766 8 246 4.0 1.0 2.5 2.3 269 chrX 15228497 intergenic CG9101 - chrX 15228632 intergenic CG9101 - chrX 15228766 3` UTR CG9101 - chrX_8_15225001 chrX_15225001 RAL-804 1762 chrX 15273723 15273733 chrX 15274871 15274885 1360 5 1153 4.5 2.0 3.2 1.2 1162 chrX 15273723 intergenic not near genes chrX 15274304 intergenic not near genes chrX 15274885 intergenic not near genes chrX_5_15270001 chrX_15270001 RAL-804 1763 chrX 15369849 15369863 chrX 15369931 15369944 4 81 2.0 4.0 3.0 1.0 95 chrX 15369849 intron acj6 - chrX 15369896 intron acj6 - chrX 15369944 intron acj6 - chrX_4_15365001 chrX_15365001 RAL-804 1764 chrX 15413050 15413078 chrX 15417351 15417380 Juan 8 4301 4.5 1.5 3.0 2.0 4330 chrX 15413050 intron Cngl - chrX 15415215 intron Cngl - chrX 15417380 intron Cngl - chrX_8_15415001 chrX_15415001 RAL-804 1765 chrX 15435687 15435697 chrX 15436120 15436130 rover 5 433 0.0 6.0 3.0 1.2 443 chrX 15435687 intron Cngl - chrX 15435908 intron Cngl - chrX 15436130 intron Cngl - chrX_5_15435001 chrX_15435001 RAL-804 1766 chrX 15525939 15525948 chrX 15526016 15526025 4 77 2.5 6.0 4.2 0.8 86 chrX 15525939 intron Ac13E - chrX 15525982 intron Ac13E - chrX 15526025 intron Ac13E - chrX_4_15525001 chrX_15525001 RAL-804 1767 chrX 15565648 15565670 chrX 15565734 15565756 6 86 1.0 3.5 2.2 1.9 108 chrX 15565648 intergenic not near genes chrX 15565702 intergenic not near genes chrX 15565756 intergenic not near genes chrX_6_15565001 chrX_15565001 RAL-804 1768 chrX 15678046 15678058 chrX 15678123 15678135 5 77 0.5 4.0 2.2 1.6 89 chrX 15678046 intergenic CG12708 + chrX 15678090 intergenic CG12708 + chrX 15678135 intergenic CG12708 + chrX_5_15675001 chrX_15675001 RAL-804 1769 chrX 16105516 16105537 chrX 16105603 16105624 4 87 1.0 1.0 1.0 2.0 108 chrX 16105516 intergenic not near genes chrX 16105570 intergenic not near genes chrX 16105624 intergenic not near genes chrX_4_16105001 chrX_16105001 RAL-804 1770 chrX 16329439 16329444 chrX 16329522 16329526 4 83 0.0 8.0 4.0 0.8 87 chrX 16329439 intron CG9919 - chrX 16329482 intron CG9919 - chrX 16329526 exon CG9919 - chrX_4_16325001 chrX_16325001 RAL-804 1771 chrX 16492644 16492677 chrX 16498221 16498254 mdg3 7 5577 4.0 1.5 2.8 1.8 5610 chrX 16492644 intron para - chrX 16495449 intron para - chrX 16498254 intron para - chrX_7_16495001 chrX_16495001 RAL-804 1772 chrX 16618517 16618551 chrX 16618627 16618661 10 110 2.5 1.0 1.8 3.6 144 chrX 16618517 intron CG9782 - chrX 16618589 intron CG9782 - chrX 16618661 intron CG9782 - chrX_10_16615001 chrX_16615001 RAL-804 1773 chrX 16623481 16623499 chrX 16623567 16623584 6 86 4.0 0.0 2.0 2.0 103 chrX 16623481 intergenic not near genes chrX 16623532 intergenic Rok - chrX 16623584 intergenic Rok - chrX_6_16620001 chrX_16620001 RAL-804 1774 chrX 16650928 16650955 chrX 16651005 16651032 6 77 1.0 0.0 0.5 4.0 104 chrX 16650928 intergenic CG32573 +,CG42512 + chrX 16650980 intergenic CG32573 +,CG42512 + chrX 16651032 intergenic CG32573 +,CG42512 + chrX_6_16650001 chrX_16650001 RAL-804 1775 chrX 16689621 16689655 chrX 16689707 16689722 12 79 3.0 2.0 2.5 3.4 101 chrX 16689621 intron Sep4 - chrX 16689672 intron Sep4 - chrX 16689722 intron Sep4 - chrX_12_16685001 chrX_16685001 RAL-804 1776 chrX 16783832 16783842 chrX 16783911 16783922 4 80 0.0 9.0 4.5 0.7 90 chrX 16783832 intergenic mRpL22 +,if - chrX 16783877 intergenic mRpL22 +,if - chrX 16783922 intergenic mRpL22 +,if - chrX_4_16780001 chrX_16780001 RAL-804 1777 chrX 16833204 16833224 chrX 16833289 16833309 7 85 4.5 0.0 2.2 2.2 105 chrX 16833204 intron CG13004 - chrX 16833256 intron CG13004 - chrX 16833309 intron CG13004 - chrX_7_16830001 chrX_16830001 RAL-804 1778 chrX 16951340 16951355 chrX 16951401 16951413 7 65 1.5 1.5 1.5 2.8 73 chrX 16951340 exon RhoGAP15B + chrX 16951376 exon RhoGAP15B + chrX 16951413 exon RhoGAP15B + chrX_7_16950001 chrX_16950001 RAL-804 1779 chrX 17011973 17011985 chrX 17012055 17012061 4 81 2.5 4.0 3.2 1.0 88 chrX 17011973 intron CG45002 - chrX 17012017 intron CG45002 - chrX 17012061 intron CG45002 - chrX_4_17010001 chrX_17010001 RAL-804 1780 chrX 17122646 17122674 chrX 17122737 17122763 9 90 3.0 4.0 3.5 2.0 117 chrX 17122646 intron CG5004 + chrX 17122704 intron CG5004 + chrX 17122763 intron CG5004 + chrX_9_17120001 chrX_17120001 RAL-804 1781 chrX 17234264 17234273 chrX 17234357 17234367 6 94 5.5 0.0 2.8 1.6 103 chrX 17234264 intron f + chrX 17234316 intron f + chrX 17234367 intron f + chrX_6_17230001 chrX_17230001 RAL-804 1782 chrX 17427046 17427077 chrX 17427133 17427163 12 85 2.0 3.0 2.5 3.4 117 chrX 17427046 intron,intron CG12994 -,CG5613 + chrX 17427104 intron,intron CG12994 -,CG5613 + chrX 17427163 intron,intron CG12994 -,CG5613 + chrX_12_17425001 chrX_17425001 RAL-804 1783 chrX 17502349 17502361 chrX 17502429 17502441 5 80 1.0 0.5 0.8 2.8 92 chrX 17502349 intron CG43658 - chrX 17502395 intron CG43658 - chrX 17502441 intron CG43658 - chrX_5_17500001 chrX_17500001 RAL-804 1784 chrX 17680889 17680924 chrX 17680966 17681001 10 76 2.0 3.0 2.5 2.9 112 chrX 17680889 intron chas - chrX 17680945 intron chas - chrX 17681001 intron chas - chrX_10_17680001 chrX_17680001 RAL-804 1785 chrX 17792961 17792982 chrX 17796257 17796278 flea 6 3296 1.0 2.5 1.8 2.1 3317 chrX 17792961 intron OdsH + chrX 17794620 intron OdsH + chrX 17796278 intron OdsH + chrX_6_17790001 chrX_17790001 RAL-804 1786 chrX 18003458 18003485 chrX 18003539 18003553 4 78 0.5 0.0 0.2 3.3 95 chrX 18003458 intron Sh - chrX 18003506 intron Sh - chrX 18003553 intron Sh - chrX_4_18000001 chrX_18000001 RAL-804 1787 chrX 18194065 18194100 chrX 18194600 18194635 BS 8 535 2.0 1.0 1.5 3.2 570 chrX 18194065 intron Frq2 + chrX 18194350 intron Frq2 + chrX 18194635 intron Frq2 + chrX_8_18190001 chrX_18190001 RAL-804 1788 chrX 18281555 18281579 chrX 18281629 18281658 4 78 4.0 1.5 2.8 1.1 103 chrX 18281555 intron upd3 + chrX 18281606 intron upd3 + chrX 18281658 intron upd3 + chrX_4_18280001 chrX_18280001 RAL-804 1789 chrX 18429497 18429523 chrX 18434807 18434833 Transpac 9 5310 0.5 3.5 2.0 3.0 5336 chrX 18429497 intergenic not near genes chrX 18432165 intergenic not near genes chrX 18434833 intergenic not near genes chrX_9_18430001 chrX_18430001 RAL-804 1790 chrX 18558783 18558802 chrX 18558864 18558884 6 82 0.0 2.0 1.0 3.0 101 chrX 18558783 intron Bx + chrX 18558834 intron Bx + chrX 18558884 intron Bx + chrX_6_18555001 chrX_18555001 RAL-804 1791 chrX 18577782 18577796 chrX 18577873 18577887 7 91 1.5 4.0 2.8 1.8 105 chrX 18577782 intergenic not near genes chrX 18577834 intergenic not near genes chrX 18577887 intergenic not near genes chrX_7_18575001 chrX_18575001 RAL-804 1792 chrX 18645012 18645048 chrX 18645110 18645146 6 98 2.0 2.0 2.0 2.0 134 chrX 18645012 intron Rip11 - chrX 18645079 intron Rip11 - chrX 18645146 intron Rip11 - chrX_6_18645001 chrX_18645001 RAL-804 1793 chrX 18698850 18698876 chrX 18698967 18698993 5 117 0.0 2.5 1.2 2.3 143 chrX 18698850 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18698993 intergenic not near genes chrX_5_18695001 chrX_18695001 RAL-804 1794 chrX 18774447 18774463 chrX 18774532 18774548 7 85 4.5 0.5 2.5 2.0 101 chrX 18774447 intergenic CCKLR-17D3 - chrX 18774498 intergenic CCKLR-17D3 - chrX 18774548 intergenic not near genes chrX_7_18770001 chrX_18770001 RAL-804 1795 chrX 18975306 18975335 chrX 18975466 18975495 9 155 1.5 3.5 2.5 2.6 189 chrX 18975306 intron CG43759 + chrX 18975400 intron CG43759 + chrX 18975495 intron CG43759 + chrX_9_18975001 chrX_18975001 RAL-804 1796 chrX 19060410 19060437 chrX 19065194 19065220 Doc 7 4784 3.0 3.5 3.2 1.7 4810 chrX 19060410 intron CG14190 + chrX 19062815 intron CG14190 + chrX 19065220 intron CG14190 + chrX_7_19060001 chrX_19060001 RAL-804 1797 chrX 19125690 19125720 chrX 19125819 19125849 10 129 1.0 1.0 1.0 5.0 159 chrX 19125690 intron tgy - chrX 19125770 intron tgy - chrX 19125849 intron tgy - chrX_10_19125001 chrX_19125001 RAL-804 1798 chrX 13057298 13057300 chrX 19242812 19242814 11 6185514 2.5 0.0 1.2 5.0 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_11_16150001 chrX_16150001 RAL-804 1799 chrX 19256653 19256674 chrX 19256730 19256753 8 78 1.5 3.5 2.5 2.3 100 chrX 19256653 intron rictor - chrX 19256703 intron rictor - chrX 19256753 intron rictor - chrX_8_19255001 chrX_19255001 RAL-804 1800 chrX 19315523 19315534 chrX 19315722 19315731 4 198 3.0 2.0 2.5 1.1 208 chrX 19315523 intron out - chrX 19315627 intron out - chrX 19315731 intron out - chrX_4_19315001 chrX_19315001 RAL-804 1801 chrX 19356987 19357012 chrX 19358428 19358453 NOF 6 1441 2.0 1.0 1.5 2.4 1466 chrX 19356987 intron kek5 + chrX 19357720 intron kek5 + chrX 19358453 intron kek5 + chrX_6_19355001 chrX_19355001 RAL-804 1802 chrX 19380163 19380177 chrX 19380404 19380413 pogo 4 240 5.5 2.5 4.0 0.8 250 chrX 19380163 intron kek5 + chrX 19380288 intron kek5 + chrX 19380413 intron kek5 + chrX_4_19380001 chrX_19380001 RAL-804 1803 chrX 19472129 19472154 chrX 19472699 19472722 jockey 6 568 2.5 4.5 3.5 1.3 593 chrX 19472129 intergenic kek5 + chrX 19472426 intergenic not near genes chrX 19472722 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-804 1804 chrX 19500558 19500743 chrX 19500635 19500830 9 80 0.0 1.0 0.5 6.0 272 chrX 19500558 intron,intron CG14200 +,Pfrx + chrX 19500694 intron,intron CG14200 +,Pfrx + chrX 19500830 intron,intron CG14200 +,Pfrx + chrX_9_19500001 chrX_19500001 RAL-804 1805 chrX 12735130 12735134 chrX 19560909 19560924 5 6825780 7.5 9.0 8.2 0.5 6825794 chrX 12735130 intron Smr - chrX 16148027 5` UTR disco-r - chrX 19560924 3` UTR Grip84 - chrX_5_16145001 chrX_16145001 RAL-804 1806 chrX 19593947 19593975 chrX 19594032 19594060 11 84 5.0 3.5 4.2 2.1 113 chrX 19593947 exon CG14205 + chrX 19594004 intron CG14205 + chrX 19594060 intron CG14205 + chrX_11_19590001 chrX_19590001 RAL-804 1807 chrX 19710072 19710103 chrX 19711858 19711889 S-element 10 1786 5.0 3.0 4.0 2.0 1817 chrX 19710072 intron meso18E - chrX 19710980 intron meso18E - chrX 19711889 intron meso18E - chrX_10_19710001 chrX_19710001 RAL-804 1808 chrX 19755529 19755552 chrX 19755620 19755643 5 91 2.0 1.5 1.8 1.8 114 chrX 19755529 intron Pmp70 + chrX 19755586 intron Pmp70 + chrX 19755643 intron Pmp70 + chrX_5_19755001 chrX_19755001 RAL-804 1809 chrX 19756142 19756153 chrX 19756229 19756240 4 87 0.5 1.0 0.8 2.2 98 chrX 19756142 intron Pmp70 + chrX 19756191 intron Pmp70 + chrX 19756240 intron Pmp70 + chrX_4_19755001 chrX_19755001 RAL-804 1810 chrX 19791493 19791511 chrX 19791656 19791675 4 163 2.0 1.5 1.8 1.4 182 chrX 19791493 intergenic not near genes chrX 19791584 intergenic not near genes chrX 19791675 intergenic not near genes chrX_4_19790001 chrX_19790001 RAL-804 1811 chrX 19822833 19822863 chrX 19823000 19823017 6 162 1.0 3.0 2.0 2.0 184 chrX 19822833 intergenic not near genes chrX 19822925 intergenic skpE - chrX 19823017 intergenic skpE - chrX_6_19820001 chrX_19820001 RAL-804 1812 chrX 20007988 20008000 chrX 20008086 20008098 4 98 1.5 0.0 0.8 2.2 110 chrX 20007988 intron Dop2R - chrX 20008043 intron Dop2R - chrX 20008098 intron Dop2R - chrX_4_20005001 chrX_20005001 RAL-804 1813 chrX 20105197 20105231 chrX 20105300 20105334 5 104 28.0 32.0 30.0 0.2 137 chrX 20105197 intergenic not near genes chrX 20105266 intergenic not near genes chrX 20105334 intergenic not near genes chrX_5_20105001 chrX_20105001 RAL-804 1814 chrX 20113356 20113370 chrX 20113504 20113518 5 148 0.5 1.5 1.0 2.5 162 chrX 20113356 intergenic not near genes chrX 20113437 intergenic not near genes chrX 20113518 intergenic not near genes chrX_5_20110001 chrX_20110001 RAL-804 1815 chrX 20271503 20271523 chrX 20271595 20271615 5 92 2.5 0.0 1.2 2.3 112 chrX 20271503 intergenic not near genes chrX 20271559 intergenic not near genes chrX 20271615 intergenic not near genes chrX_5_20270001 chrX_20270001 RAL-804 1816 chrX 20312894 20312911 chrX 20312972 20312989 5 78 0.5 0.5 0.5 3.3 95 chrX 20312894 intron CG1504 - chrX 20312942 intron CG1504 - chrX 20312989 intron CG1504 - chrX_5_20310001 chrX_20310001 RAL-804 1817 chrX 20374106 20374127 chrX 20374182 20374203 4 76 0.0 1.5 0.8 2.2 97 chrX 20374106 intergenic not near genes chrX 20374154 intergenic not near genes chrX 20374203 intergenic not near genes chrX_4_20370001 chrX_20370001 RAL-804 1818 chrX 20377325 20377348 chrX 20378792 20378815 hobo 10 1466 2.5 2.5 2.5 2.9 1490 chrX 20377325 intergenic not near genes chrX 20378070 intergenic not near genes chrX 20378815 intergenic not near genes chrX_10_20375001 chrX_20375001 RAL-804 1819 chrX 20384965 20384985 chrX 20385450 20385469 6 485 0.0 3.0 1.5 2.4 504 chrX 20384965 intergenic not near genes chrX 20385217 intergenic not near genes chrX 20385469 intergenic not near genes chrX_6_20385001 chrX_20385001 RAL-804 1820 chrX 20385621 20385628 chrX 20385881 20385888 5 260 4.5 0.5 2.5 1.4 267 chrX 20385621 intergenic not near genes chrX 20385754 intergenic not near genes chrX 20385888 intergenic not near genes chrX_5_20385001 chrX_20385001 RAL-804 1821 chrX 20443171 20443182 chrX 20443247 20443258 7 76 2.5 2.0 2.2 2.2 87 chrX 20443171 exon CG1695 + chrX 20443214 intron CG1695 + chrX 20443258 intron CG1695 + chrX_7_20440001 chrX_20440001 RAL-804 1822 chrX 20710415 20710432 chrX 20710492 20710509 6 77 0.5 1.5 1.0 3.0 94 chrX 20710415 intergenic not near genes chrX 20710462 intergenic not near genes chrX 20710509 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-804 1823 chrX 20915042 20915075 chrX 20915213 20915245 9 170 2.0 1.5 1.8 3.2 203 chrX 20915042 intron shakB - chrX 20915144 intron shakB - chrX 20915245 intron shakB - chrX_9_20915001 chrX_20915001 RAL-804 1824 chrX 20940722 20940750 chrX 20942191 20942219 hobo 15 1469 3.0 3.0 3.0 3.8 1497 chrX 20940722 intergenic not near genes chrX 20941470 intergenic not near genes chrX 20942219 intergenic not near genes chrX_15_20940001 chrX_20940001 RAL-804 1825 chrX 21042556 21042577 chrX 21045343 21045365 7 2787 20.5 21.0 20.8 0.3 2809 chrX 21042556 exon Mgstl + chrX 21043960 exon,3` UTR Mgstl +,CR44431 - chrX 21045365 intron Cbs + chrX_7_21040001 chrX_21040001 RAL-804 1826 chrX 21086132 21086163 chrX 21087161 21087184 jockey 10 1026 3.5 2.5 3.0 2.5 1052 chrX 21086132 intergenic not near genes chrX 21086658 intergenic not near genes chrX 21087184 intergenic not near genes chrX_10_21085001 chrX_21085001 RAL-804 1827 chrX 21088044 21088072 chrX 21088176 21088191 6 128 1.5 2.0 1.8 2.1 147 chrX 21088044 intergenic not near genes chrX 21088118 intergenic not near genes chrX 21088191 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-804 1828 chrX 21092656 21092687 chrX 21092731 21092764 17 72 4.0 0.0 2.0 5.7 108 chrX 21092656 intergenic not near genes chrX 21092710 intergenic not near genes chrX 21092764 intergenic not near genes chrX_17_21090001 chrX_21090001 RAL-804 1829 chrX 21275159 21275192 chrX 21275235 21275269 9 78 0.5 2.0 1.2 4.1 110 chrX 21275159 intron CG32521 - chrX 21275214 intron CG32521 - chrX 21275269 intron CG32521 - chrX_9_21275001 chrX_21275001 RAL-804 1830 chrX 21419720 21419737 chrX 21419796 21419826 6 81 0.5 3.5 2.0 2.0 106 chrX 21419720 intergenic not near genes chrX 21419773 intergenic not near genes chrX 21419826 intergenic not near genes chrX_6_21415001 chrX_21415001 RAL-804 1831 chrX 21455215 21455225 chrX 21455394 21455404 4 179 1.5 0.0 0.8 2.2 189 chrX 21455215 intron CG42343 - chrX 21455310 intron CG42343 - chrX 21455404 intron CG42343 - chrX_4_21455001 chrX_21455001 RAL-804 1832 chrX 21474403 21474426 chrX 21474769 21474792 1731 8 366 4.0 4.0 4.0 1.6 389 chrX 21474403 intergenic not near genes chrX 21474598 intergenic not near genes chrX 21474792 intergenic not near genes chrX_8_21470001 chrX_21470001 RAL-804 1833 chrX 21517003 21517020 chrX 21517081 21517099 5 79 1.5 4.5 3.0 1.2 96 chrX 21517003 intron CR45082 - chrX 21517051 intron CR45082 - chrX 21517099 intron CR45082 - chrX_5_21515001 chrX_21515001 RAL-804 1834 chrX 21565416 21565441 chrX 21565494 21565519 7 78 2.0 2.0 2.0 2.3 103 chrX 21565416 intergenic not near genes chrX 21565468 intergenic not near genes chrX 21565519 intergenic not near genes chrX_7_21565001 chrX_21565001 RAL-804 1835 chrX 21668258 21668285 chrX 21668343 21668370 5 85 0.5 0.0 0.2 4.2 112 chrX 21668258 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668370 intergenic not near genes chrX_5_21665001 chrX_21665001 RAL-804 1836 chrX 22448270 22448287 chrX 22448409 22448426 4 139 3.0 1.5 2.2 1.2 156 chrX 22448270 intron CG14615 - chrX 22448348 intron CG14615 - chrX 22448426 intron CG14615 - chrX_4_22445001 chrX_22445001 RAL-804 1837 chrX 22478886 22478893 chrX 22479019 22479026 4 132 0.0 3.5 1.8 1.4 140 chrX 22478886 intron CG12576 - chrX 22478956 intron CG12576 - chrX 22479026 intron CG12576 - chrX_4_22475001 chrX_22475001 RAL-804 1838 chrX 22661981 22662004 chrX 22662080 22662102 6 99 0.0 0.5 0.2 5.0 121 chrX 22661981 intron CR44997 + chrX 22662042 intron CR44997 + chrX 22662102 intron CR44997 + chrX_6_22660001 chrX_22660001 RAL-804 1839 chrX 22665792 22665825 chrX 22665871 22665901 16 77 3.0 1.0 2.0 5.3 109 chrX 22665792 intron CR44997 + chrX 22665846 intron CR44997 + chrX 22665901 intron CR44997 + chrX_16_22665001 chrX_22665001 RAL-804 1840 chrX 22697500 22697523 chrX 22701797 22701820 Juan 5 4297 1.0 3.0 2.0 1.7 4320 chrX 22697500 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701820 intron CR44997 + chrX_5_22695001 chrX_22695001 RAL-804 1841 chrX 22798774 22798791 chrX 22798891 22798908 5 117 1.5 0.0 0.8 2.8 134 chrX 22798774 intergenic not near genes chrX 22798841 intergenic not near genes chrX 22798908 intergenic not near genes chrX_5_22795001 chrX_22795001 RAL-804 1842 chrX 22824231 22824448 chrX 22824357 22824581 4 130 0.5 0.0 0.2 3.3 350 chrX 22824231 intergenic fog - chrX 22824406 3` UTR fog - chrX 22824581 3` UTR fog - chrX_4_22820001 chrX_22820001 RAL-804 1843 chrX 22867979 22868006 chrX 22868092 22868119 8 114 0.5 0.0 0.2 6.7 140 chrX 22867979 exon CG42346 + chrX 22868049 intron CG42346 + chrX 22868119 intron CG42346 + chrX_8_22865001 chrX_22865001 RAL-804 1844 chrX 22870886 22870897 chrX 22870977 22870987 6 90 3.0 5.5 4.2 1.2 101 chrX 22870886 intron,3` UTR CG42346 +,CR43656 - chrX 22870936 intron,3` UTR CG42346 +,CR43656 - chrX 22870987 intron,3` UTR CG42346 +,CR43656 - chrX_6_22870001 chrX_22870001 RAL-804