SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47455	47485	chr2L	52568	52599	jockey	6	5117	2.0	6.0	4.0	1.2	5144	chr2L	47455	intron	Cda5 -	chr2L	50027	intron	Cda5 -	chr2L	52599	intron	Cda5 -	chr2L_6_50001	chr2L_50001	RAL-802_95b
4	chr2L	347877	347911	chr2L	355386	355431	blood	9	7514	3.5	1.5	2.5	2.6	7554	chr2L	347877	3` UTR	Plc21C +	chr2L	351654	intron	Plc21C +	chr2L	355431	3` UTR	Plc21C +	chr2L_9_350001	chr2L_350001	RAL-802_95b
7	chr2L	686923	686942	chr2L	695983	696002	roo	4	9058	1.0	2.5	1.8	1.4	9079	chr2L	686923	intron	ds -	chr2L	691462	intron	ds -	chr2L	696002	intron	ds -	chr2L_4_690001	chr2L_690001	RAL-802_95b
9	chr2L	996709	996746	chr2L	1005817	1005844	roo	7	9113	0.0	3.5	1.8	2.5	9135	chr2L	996709	intergenic	not near genes	chr2L	1001276	intergenic	not near genes	chr2L	1005844	intergenic	not near genes	chr2L_7_1000001	chr2L_1000001	RAL-802_95b
13	chr2L	1220132	1220160	chr2L	1227617	1227631	blood	5	7481	4.0	5.5	4.8	0.9	7499	chr2L	1220132	intron	CG42329 +	chr2L	1223882	intron	CG42329 +	chr2L	1227631	intron	CG42329 +	chr2L_5_1220001	chr2L_1220001	RAL-802_95b
16	chr2L	1570685	1570709	chr2L	1573562	1573601	F-element	5	2889	2.0	1.0	1.5	2.0	2916	chr2L	1570685	intron	haf +	chr2L	1572143	intron	haf +	chr2L	1573601	intron	haf +	chr2L_5_1570001	chr2L_1570001	RAL-802_95b
19	chr2L	1678953	1678986	chr2L	1686456	1686464	blood	4	7496	0.5	4.5	2.5	1.1	7511	chr2L	1678953	intron	chinmo +	chr2L	1682708	intron	chinmo +	chr2L	1686464	intron	chinmo +	chr2L_4_1680001	chr2L_1680001	RAL-802_95b
20	chr2L	1711341	1711379	chr2L	1711686	1711703	mdg3	4	335	0.0	1.0	0.5	2.7	362	chr2L	1711341	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711522	3` UTR	frtz -	chr2L	1711703	3` UTR	frtz -	chr2L_4_1710001	chr2L_1710001	RAL-802_95b
29	chr2L	2100386	2100403	chr2L	2109525	2109543	roo	4	9151	4.5	1.0	2.8	1.1	9157	chr2L	2100386	intron	dpr3 -	chr2L	2104964	intron	dpr3 -	chr2L	2109543	intron	dpr3 -	chr2L_4_2100001	chr2L_2100001	RAL-802_95b
38	chr2L	3073019	3073045	chr2L	3078237	3078267	copia	6	5221	3.5	1.5	2.5	1.7	5248	chr2L	3073019	intron	toc -	chr2L	3075643	intron	toc -	chr2L	3078267	intron	toc -	chr2L_6_3075001	chr2L_3075001	RAL-802_95b
43	chr2L	3202728	3202767	chr2L	3210172	3210216	mdg1	4	7448	2.0	0.0	1.0	2.0	7488	chr2L	3202728	intergenic	not near genes	chr2L	3206472	intergenic	not near genes	chr2L	3210216	intergenic	CR45336 +	chr2L_4_3205001	chr2L_3205001	RAL-802_95b
45	chr2L	3251488	3251501	chr2L	3259073	3259081	springer	4	7584	3.5	1.5	2.5	1.1	7593	chr2L	3251488	intergenic	not near genes	chr2L	3255284	intergenic	not near genes	chr2L	3259081	intergenic	not near genes	chr2L_4_3255001	chr2L_3255001	RAL-802_95b
46	chr2L	3251503	3251520	chr2L	3259061	3259105	springer	6	7580	2.0	1.5	1.8	2.1	7602	chr2L	3251503	intergenic	not near genes	chr2L	3255304	intergenic	not near genes	chr2L	3259105	intergenic	not near genes	chr2L_6_3255001	chr2L_3255001	RAL-802_95b
48	chr2L	3388584	3388630	chr2L	3388845	3388891	pogo	10	261	3.0	1.0	2.0	3.3	307	chr2L	3388584	intergenic	CG42460 -	chr2L	3388738	intergenic	CG42460 -	chr2L	3388891	intergenic	CG42460 -,CR44791 +	chr2L_10_3385001	chr2L_3385001	RAL-802_95b
52	chr2L	3649785	3649815	chr2L	3654988	3655038	copia	10	5221	2.5	2.5	2.5	2.9	5253	chr2L	3649785	intron	for -	chr2L	3652412	intron	for -	chr2L	3655038	intron	for -	chr2L_10_3650001	chr2L_3650001	RAL-802_95b
62	chr2L	4601684	4601734	chr2L	4609145	4609195	mdg1	6	7458	2.5	0.0	1.2	2.7	7511	chr2L	4601684	intron	dp -	chr2L	4605440	intron	dp -	chr2L	4609195	intron	dp -	chr2L_6_4605001	chr2L_4605001	RAL-802_95b
63	chr2L	4661826	4661853	chr2L	4669426	4669446	opus	4	7598	3.0	3.0	3.0	1.0	7620	chr2L	4661826	intergenic	not near genes	chr2L	4665636	intergenic	not near genes	chr2L	4669446	intergenic	not near genes	chr2L_4_4665001	chr2L_4665001	RAL-802_95b
65	chr2L	4953501	4953523	chr2L	4953762	4953784	pogo	4	261	3.0	0.0	1.5	1.6	283	chr2L	4953501	intergenic	Jon25Bii -	chr2L	4953642	intergenic	not near genes	chr2L	4953784	intergenic	Jon25Bi -	chr2L_4_4950001	chr2L_4950001	RAL-802_95b
79	chr2L	5827715	5827736	chr2L	5836718	5836764	roo	5	9002	2.5	1.5	2.0	1.7	9049	chr2L	5827715	intron	TrissinR +	chr2L	5832240	intron	TrissinR +	chr2L	5836764	intron	TrissinR +	chr2L_5_5830001	chr2L_5830001	RAL-802_95b
85	chr2L	6426843	6426884	chr2L	6445118	6445157	roo	7	18275	6.0	1.0	3.5	1.6	18314	chr2L	6426843	3` UTR	CG9527 -	chr2L	6436000	intron	CG9527 -	chr2L	6445157	exon	CG9527 -	chr2L_7_6435001	chr2L_6435001	RAL-802_95b
90	chr2L	7343334	7343359	chr2L	7350440	7350453	roo	5	7111	1.0	0.5	0.8	2.8	7119	chr2L	7343334	intron	Wnt6 +	chr2L	7346894	intron	Wnt6 +	chr2L	7350453	intron	Wnt6 +	chr2L_5_7345001	chr2L_7345001	RAL-802_95b
96	chr2L	7959021	7959049	chr2L	7960452	7960458	pogo	6	1424	4.0	1.0	2.5	1.7	1437	chr2L	7959021	intron	Snoo -	chr2L	7959740	intron	Snoo -	chr2L	7960458	intron	Snoo -	chr2L_6_7955001	chr2L_7955001	RAL-802_95b
102	chr2L	8018822	8018827	chr2L	8023626	8023631	Doc	4	4804	0.0	7.5	3.8	0.8	4809	chr2L	8018822	intron	Tg +	chr2L	8021226	intron	Tg +	chr2L	8023631	intron	Tg +	chr2L_4_8020001	chr2L_8020001	RAL-802_95b
108	chr2L	8452414	8452451	chr2L	8461598	8461642	roo	9	9187	2.0	12.0	7.0	1.1	9228	chr2L	8452414	intron	fu12 -	chr2L	8457028	intron	fu12 -	chr2L	8461642	intron	fu12 -	chr2L_9_8455001	chr2L_8455001	RAL-802_95b
113	chr2L	8723096	8723148	chr2L	8731493	8731530	Tirant	8	8391	1.5	0.5	1.0	4.0	8434	chr2L	8723096	intron	raw -	chr2L	8727313	intron	raw -	chr2L	8731530	intron	raw -	chr2L_8_8725001	chr2L_8725001	RAL-802_95b
119	chr2L	9000259	9000302	chr2L	9007787	9007803	roo	10	7523	2.0	4.0	3.0	2.5	7544	chr2L	9000259	intergenic	Try29F +	chr2L	9004031	intergenic	not near genes	chr2L	9007803	intergenic	not near genes	chr2L_10_9000001	chr2L_9000001	RAL-802_95b
122	chr2L	9217982	9217989	chr2L	9222759	9222796	Doc	7	4802	3.5	3.5	3.5	1.6	4814	chr2L	9217982	intron	tai +	chr2L	9220389	intron	tai +	chr2L	9222796	intron	tai +	chr2L_7_9220001	chr2L_9220001	RAL-802_95b
140	chr2L	9973738	9973758	chr2L	9980850	9980851	HMS-Beagle	4	7112	0.0	2.0	1.0	2.0	7113	chr2L	9973738	intergenic	not near genes	chr2L	9977294	intergenic	not near genes	chr2L	9980851	intergenic	not near genes	chr2L_4_9975001	chr2L_9975001	RAL-802_95b
149	chr2L	10592825	10592875	chr2L	10600506	10600553	opus	8	7676	0.5	3.0	1.8	2.9	7728	chr2L	10592825	intron	Trim9 +	chr2L	10596689	intron	Trim9 +	chr2L	10600553	intron	Trim9 +	chr2L_8_10595001	chr2L_10595001	RAL-802_95b
167	chr2L	11540585	11540611	chr2L	11548007	11548033	Tabor	4	7420	3.0	4.5	3.8	0.8	7448	chr2L	11540585	intergenic	not near genes	chr2L	11544309	intergenic	not near genes	chr2L	11548033	intergenic	not near genes	chr2L_4_11540001	chr2L_11540001	RAL-802_95b
174	chr2L	12067324	12067337	chr2L	12074386	12074409	297	4	7070	5.0	3.5	4.2	0.8	7085	chr2L	12067324	intergenic	not near genes	chr2L	12070866	intergenic	not near genes	chr2L	12074409	intergenic	not near genes	chr2L_4_12070001	chr2L_12070001	RAL-802_95b
175	chr2L	12067347	12067363	chr2L	12074381	12074395	297	8	7061	2.5	3.0	2.8	2.1	7048	chr2L	12067347	intergenic	not near genes	chr2L	12070871	intergenic	not near genes	chr2L	12074395	intergenic	not near genes	chr2L_8_12070001	chr2L_12070001	RAL-802_95b
183	chr2L	12558328	12558351	chr2L	12565462	12565500	HMS-Beagle	4	7144	0.0	0.5	0.2	3.3	7172	chr2L	12558328	intergenic	not near genes	chr2L	12561914	intergenic	not near genes	chr2L	12565500	intergenic	not near genes	chr2L_4_12560001	chr2L_12560001	RAL-802_95b
185	chr2L	12763814	12763872	chr2L	12764044	12764044	BS	5	210	1.5	0.5	1.0	2.5	230	chr2L	12763814	intergenic	not near genes	chr2L	12763929	intergenic	not near genes	chr2L	12764044	intergenic	not near genes	chr2L_5_12760001	chr2L_12760001	RAL-802_95b
187	chr2L	12781785	12781809	chr2L	12789248	12789281	Quasimodo	7	7463	3.5	2.0	2.8	1.8	7496	chr2L	12781785	intergenic	not near genes	chr2L	12785533	intergenic	not near genes	chr2L	12789281	intergenic	not near genes	chr2L_7_12785001	chr2L_12785001	RAL-802_95b
188	chr2L	12791607	12791627	chr2L	12795282	12795312	F-element	7	3686	1.0	5.0	3.0	1.8	3705	chr2L	12791607	intergenic	not near genes	chr2L	12793460	intergenic	not near genes	chr2L	12795312	intergenic	not near genes	chr2L_7_12790001	chr2L_12790001	RAL-802_95b
189	chr2L	13036241	13036269	chr2L	13036487	13036491	X-element	6	253	1.0	3.5	2.2	1.9	250	chr2L	13036241	intron	CG9932 -	chr2L	13036366	intron	CG9932 -	chr2L	13036491	intron	CG9932 -	chr2L_6_13035001	chr2L_13035001	RAL-802_95b
193	chr2L	13405631	13405674	chr2L	13410445	13410455	Doc	6	4800	1.0	3.0	2.0	2.0	4824	chr2L	13405631	exon	CG7110 +	chr2L	13408043	intron	CG7110 +	chr2L	13410455	intron	CG7110 +	chr2L_6_13405001	chr2L_13405001	RAL-802_95b
195	chr2L	13449454	13449492	chr2L	13456910	13456948	Quasimodo	5	7454	9.0	9.0	9.0	0.5	7494	chr2L	13449454	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453201	intron	CG42784 +	chr2L	13456948	intron	CG42784 +	chr2L_5_13450001	chr2L_13450001	RAL-802_95b
196	chr2L	13481433	13481471	chr2L	13482060	13482093	jockey	11	621	2.0	1.5	1.8	3.9	660	chr2L	13481433	intron	CG42784 +	chr2L	13481763	intron	CG42784 +	chr2L	13482093	intron	CG42784 +	chr2L_11_13480001	chr2L_13480001	RAL-802_95b
197	chr2L	13522115	13522153	chr2L	13527653	13527690	Transpac	4	5538	4.5	3.0	3.8	0.8	5575	chr2L	13522115	intron	B4 -	chr2L	13524902	intron	B4 -	chr2L	13527690	intron	B4 -	chr2L_4_13520001	chr2L_13520001	RAL-802_95b
202	chr2L	13853075	13853086	chr2L	13862245	13862256	roo	4	9170	4.5	7.0	5.8	0.6	9181	chr2L	13853075	intron	CenG1A +	chr2L	13857666	intron	CenG1A +	chr2L	13862256	intron	CenG1A +	chr2L_4_13855001	chr2L_13855001	RAL-802_95b
203	chr2L	13853088	13853106	chr2L	13862243	13862271	roo	5	9164	3.5	6.0	4.8	0.9	9183	chr2L	13853088	intron	CenG1A +	chr2L	13857680	intron	CenG1A +	chr2L	13862271	intron	CenG1A +	chr2L_5_13855001	chr2L_13855001	RAL-802_95b
212	chr2L	14889934	14889974	chr2L	14890379	14890419	jockey	4	445	1.5	1.0	1.2	1.8	485	chr2L	14889934	intergenic	not near genes	chr2L	14890176	intergenic	not near genes	chr2L	14890419	intergenic	not near genes	chr2L_4_14890001	chr2L_14890001	RAL-802_95b
214	chr2L	14984362	14984404	chr2L	14991984	14992026	opus	4	7620	2.5	1.5	2.0	1.3	7664	chr2L	14984362	intron	mol -	chr2L	14988194	intron	mol -	chr2L	14992026	intron	mol -	chr2L_4_14985001	chr2L_14985001	RAL-802_95b
220	chr2L	15446038	15446080	chr2L	15453527	15453556	blood	7	7486	2.0	2.5	2.2	2.2	7518	chr2L	15446038	intergenic	not near genes	chr2L	15449797	intergenic	not near genes	chr2L	15453556	intergenic	not near genes	chr2L_7_15445001	chr2L_15445001	RAL-802_95b
224	chr2L	15586411	15586443	chr2L	15593473	15593485	297	7	7060	2.5	3.5	3.0	1.8	7074	chr2L	15586411	intergenic	not near genes	chr2L	15589948	intergenic	not near genes	chr2L	15593485	intergenic	not near genes	chr2L_7_15585001	chr2L_15585001	RAL-802_95b
226	chr2L	15956022	15956048	chr2L	15957499	15957510	hobo	8	1482	5.5	2.5	4.0	1.6	1488	chr2L	15956022	intron	beat-Ib -	chr2L	15956766	intron	beat-Ib -	chr2L	15957510	intron	beat-Ib -	chr2L_8_15955001	chr2L_15955001	RAL-802_95b
228	chr2L	16141148	16141190	chr2L	16146375	16146417	copia	5	5223	0.5	1.0	0.8	2.8	5269	chr2L	16141148	intergenic	not near genes	chr2L	16143782	intergenic	not near genes	chr2L	16146417	intergenic	not near genes	chr2L_5_16140001	chr2L_16140001	RAL-802_95b
229	chr2L	16153725	16153743	chr2L	16160799	16160811	297	5	7072	2.5	2.0	2.2	1.6	7086	chr2L	16153725	intergenic	not near genes	chr2L	16157268	intergenic	not near genes	chr2L	16160811	intergenic	not near genes	chr2L_5_16155001	chr2L_16155001	RAL-802_95b
233	chr2L	16511969	16511992	chr2L	16519094	16519126	HMS-Beagle	9	7127	1.5	2.5	2.0	3.0	7157	chr2L	16511969	intron	CG5953 -	chr2L	16515548	intron	CG5953 -	chr2L	16519126	intron	CG5953 -	chr2L_9_16515001	chr2L_16515001	RAL-802_95b
240	chr2L	16852728	16852742	chr2L	16859707	16859721	Doc4-element	4	6979	15.0	7.0	11.0	0.3	6993	chr2L	16852728	intergenic	CG31810 -	chr2L	16856224	intron	CG31809 -	chr2L	16859721	intergenic	CG6012 -	chr2L_4_16855001	chr2L_16855001	RAL-802_95b
242	chr2L	16958088	16958135	chr2L	16962896	16962943	Doc	10	4806	0.5	3.0	1.8	3.6	4855	chr2L	16958088	intergenic	not near genes	chr2L	16960516	intergenic	not near genes	chr2L	16962943	intergenic	not near genes	chr2L_10_16960001	chr2L_16960001	RAL-802_95b
243	chr2L	17167547	17167595	chr2L	17167807	17167856	pogo	10	257	2.0	0.5	1.2	4.5	309	chr2L	17167547	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167702	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167856	intron,intron	CG34106 +,beat-IIIa +	chr2L_10_17165001	chr2L_17165001	RAL-802_95b
244	chr2L	17199142	17199175	chr2L	17200629	17200662	hobo	10	1485	4.5	3.0	3.8	2.1	1520	chr2L	17199142	intron	beat-IIIc -	chr2L	17199902	intron	beat-IIIc -	chr2L	17200662	intron	beat-IIIc -	chr2L_10_17195001	chr2L_17195001	RAL-802_95b
252	chr2L	17819906	17819922	chr2L	17825129	17825145	copia	4	5221	4.0	1.5	2.8	1.1	5239	chr2L	17819906	intron	CadN2 -	chr2L	17822526	intron	CadN2 -	chr2L	17825145	intron	CadN2 -	chr2L_4_17820001	chr2L_17820001	RAL-802_95b
256	chr2L	17951926	17951977	chr2L	17953413	17953464	hobo	18	1484	2.0	1.5	1.8	6.4	1538	chr2L	17951926	intergenic	CR44398 -,CR44397 -	chr2L	17952695	intergenic	not near genes	chr2L	17953464	intergenic	not near genes	chr2L_18_17950001	chr2L_17950001	RAL-802_95b
258	chr2L	18051886	18051897	chr2L	18061023	18061064	roo	4	9155	3.0	2.5	2.8	1.1	9178	chr2L	18051886	intron	rdo +	chr2L	18056475	intron	rdo +	chr2L	18061064	intron	rdo +	chr2L_4_18055001	chr2L_18055001	RAL-802_95b
280	chr2L	19652563	19652584	chr2L	19674004	19674028	opus	4	21448	5.5	2.0	3.8	0.8	21465	chr2L	19652563	intron	Lar +	chr2L	19663296	intron	Lar +	chr2L	19674028	intron	Lar +	chr2L_4_19660001	chr2L_19660001	RAL-802_95b
281	chr2L	19703523	19703560	chr2L	19712679	19712705	roo	8	9150	5.5	0.5	3.0	2.0	9182	chr2L	19703523	intron	Lar +	chr2L	19708114	intron	Lar +	chr2L	19712705	intron	Lar +	chr2L_8_19705001	chr2L_19705001	RAL-802_95b
283	chr2L	19762817	19762837	chr2L	19763079	19763089	pogo	4	258	0.0	6.5	3.2	1.0	272	chr2L	19762817	intron	fbp -	chr2L	19762953	intron	fbp -	chr2L	19763089	intron	fbp -	chr2L_4_19760001	chr2L_19760001	RAL-802_95b
287	chr2L	20005873	20005904	chr2L	20010959	20011000	flea	7	5094	0.5	2.5	1.5	2.8	5127	chr2L	20005873	intron	CG43861 -	chr2L	20008436	intron	CG43861 -	chr2L	20011000	intron	CG43861 -	chr2L_7_20005001	chr2L_20005001	RAL-802_95b
292	chr2L	20272105	20272138	chr2L	20282836	20282869	copia	11	10729	3.5	6.0	4.8	1.9	10764	chr2L	20272105	intergenic	not near genes	chr2L	20277487	intergenic	not near genes	chr2L	20282869	intergenic	not near genes	chr2L_11_20275001	chr2L_20275001	RAL-802_95b
293	chr2L	20372212	20372246	chr2L	20372480	20372507	pogo	7	262	0.5	4.0	2.2	2.2	295	chr2L	20372212	intergenic	Ugt37a1 -	chr2L	20372360	intergenic	Ugt37a1 -	chr2L	20372507	exon	Ugt37a1 -	chr2L_7_20370001	chr2L_20370001	RAL-802_95b
296	chr2L	20568657	20568666	chr2L	20569067	20569076	X-element	4	408	2.0	2.0	2.0	1.3	419	chr2L	20568657	intron	CR45347 +	chr2L	20568866	intron	CR45347 +	chr2L	20569076	intron	CR45347 +	chr2L_4_20565001	chr2L_20565001	RAL-802_95b
297	chr2L	20576207	20576231	chr2L	20583689	20583719	blood	6	7483	5.5	2.5	4.0	1.2	7512	chr2L	20576207	intergenic	CR45347 +	chr2L	20579963	intergenic	not near genes	chr2L	20583719	3` UTR	CR44909 -	chr2L_6_20575001	chr2L_20575001	RAL-802_95b
302	chr2L	20835791	20835840	chr2L	20836528	20836577	Quasimodo	9	736	2.0	2.0	2.0	3.0	786	chr2L	20835791	5` UTR	Oseg5 -	chr2L	20836184	intergenic	Oseg5 -,Spn38F -	chr2L	20836577	intergenic	Spn38F -	chr2L_9_20835001	chr2L_20835001	RAL-802_95b
303	chr2L	20891530	20891537	chr2L	20896644	20896658	jockey	4	5119	4.5	5.0	4.8	0.7	5128	chr2L	20891530	intron,intron	CG43739 -,sky -	chr2L	20894094	intron,intron	CG43739 -,sky -	chr2L	20896658	intron,intron	CG43739 -,sky -	chr2L_4_20890001	chr2L_20890001	RAL-802_95b
304	chr2L	20901480	20901489	chr2L	20902619	20902622	1360	4	1144	0.5	0.5	0.5	2.7	1142	chr2L	20901480	intron,intron	CG43739 -,sky -	chr2L	20902051	intron,intron	CG43739 -,sky -	chr2L	20902622	intron,intron	CG43739 -,sky -	chr2L_4_20900001	chr2L_20900001	RAL-802_95b
307	chr2L	20976645	20976664	chr2L	20981475	20981499	X-element	4	4834	1.5	3.0	2.2	1.2	4854	chr2L	20976645	intron	CG42238 -	chr2L	20979072	intron	CG42238 -	chr2L	20981499	intron	CG42238 -	chr2L_4_20975001	chr2L_20975001	RAL-802_95b
309	chr2L	21020280	21020298	chr2L	21023952	21023969	NOF	6	3678	3.0	1.0	2.0	2.0	3689	chr2L	21020280	intron	CG42238 -	chr2L	21022124	intron	CG42238 -	chr2L	21023969	intron	CG42238 -	chr2L_6_21020001	chr2L_21020001	RAL-802_95b
317	chr2L	21347533	21347579	chr2L	21355025	21355070	blood	9	7482	2.5	3.5	3.0	2.2	7537	chr2L	21347533	intron	Tsp39D +	chr2L	21351302	intron	Tsp39D +	chr2L	21355070	intron	Tsp39D +	chr2L_9_21350001	chr2L_21350001	RAL-802_95b
319	chr2L	21691809	21691838	chr2L	21698299	21698309	Burdock	5	6485	5.0	0.0	2.5	1.4	6500	chr2L	21691809	intron	CG31619 +	chr2L	21695059	intron	CG31619 +	chr2L	21698309	intron	CG31619 +	chr2L_5_21695001	chr2L_21695001	RAL-802_95b
327	chr2L	21981670	21981709	chr2L	21990855	21990885	roo	7	9179	3.5	3.0	3.2	1.7	9215	chr2L	21981670	exon	CG2528 -	chr2L	21986278	intron	CG2528 -	chr2L	21990885	exon	CG2528 -	chr2L_7_21985001	chr2L_21985001	RAL-802_95b
330	chr2L	22258605	22258633	chr2L	22260749	22260751	G6	8	2140	4.5	4.0	4.2	1.5	2146	chr2L	22258605	intergenic	Tif-IA +	chr2L	22259678	intergenic	not near genes	chr2L	22260751	intergenic	not near genes	chr2L_8_22255001	chr2L_22255001	RAL-802_95b
335	chr2L	22581963	22581996	chr2L	22583772	22583784	S-element	5	1805	2.5	2.0	2.2	1.6	1821	chr2L	22581963	intron	CG17494 +	chr2L	22582874	intron	CG17494 +	chr2L	22583784	intron	CG17494 +	chr2L_5_22580001	chr2L_22580001	RAL-802_95b
337	chr2L	22776405	22776443	chr2L	22778214	22778252	S-element	9	1809	5.5	3.0	4.2	1.7	1847	chr2L	22776405	intergenic	not near genes	chr2L	22777328	intergenic	not near genes	chr2L	22778252	intergenic	not near genes	chr2L_9_22775001	chr2L_22775001	RAL-802_95b
339	chr2R	1516590	1516603	chr2R	1521338	1521351	1731	6	4748	20.5	8.5	14.5	0.4	4761	chr2R	1516590	exon	Maf1 -	chr2R	1518970	intron	Maf1 -	chr2R	1521351	5` UTR	Maf1 -	chr2R_6_1515001	chr2R_1515001	RAL-802_95b
341	chr2R	2498968	2499015	chr2R	2508135	2508182	roo	10	9163	1.0	3.0	2.0	3.3	9214	chr2R	2498968	intron	MFS17 -	chr2R	2503575	intron	MFS17 -	chr2R	2508182	intron	MFS17 -	chr2R_10_2500001	chr2R_2500001	RAL-802_95b
342	chr2R	1373059	1373065	chr2R	2589337	2589343	Cr1a	4	1216278	13.0	11.0	12.0	0.3	1216284	chr2R	1373059	intron	l(2)41Ab +	chr2R	1981201	intron	CG17684 -	chr2R	2589343	intergenic	not near genes	chr2R_4_1980001	chr2R_1980001	RAL-802_95b
346	chr2R	4622944	4622986	chr2R	4624112	4624149	1360	6	1158	0.5	3.5	2.0	2.0	1205	chr2R	4622944	intergenic	CR44101 -	chr2R	4623546	intergenic	not near genes	chr2R	4624149	intergenic	not near genes	chr2R_6_4620001	chr2R_4620001	RAL-802_95b
348	chr2R	4750339	4750377	chr2R	4751503	4751523	1360	4	1162	4.0	3.0	3.5	0.9	1184	chr2R	4750339	intron	conu +	chr2R	4750931	intron	conu +	chr2R	4751523	intron	conu +	chr2R_4_4750001	chr2R_4750001	RAL-802_95b
350	chr2R	4870732	4870742	chr2R	4871256	4871273	R1A1-element	4	529	1.5	1.0	1.2	1.8	541	chr2R	4870732	intergenic	not near genes	chr2R	4871002	intergenic	not near genes	chr2R	4871273	intergenic	not near genes	chr2R_4_4870001	chr2R_4870001	RAL-802_95b
357	chr2R	5417977	5418027	chr2R	5420629	5420663	Burdock	12	2647	4.5	3.5	4.0	2.4	2686	chr2R	5417977	intron	laccase2 +	chr2R	5419320	intron	laccase2 +	chr2R	5420663	intron	laccase2 +	chr2R_12_5415001	chr2R_5415001	RAL-802_95b
379	chr2R	6494517	6494552	chr2R	6499298	6499307	F-element	9	4773	0.5	2.0	1.2	4.1	4790	chr2R	6494517	intergenic	not near genes	chr2R	6496912	intergenic	not near genes	chr2R	6499307	intergenic	not near genes	chr2R_9_6495001	chr2R_6495001	RAL-802_95b
382	chr2R	6579756	6579785	chr2R	6584860	6584892	flea	6	5105	7.0	1.0	4.0	1.2	5136	chr2R	6579756	intron	jing +	chr2R	6582324	intron	jing +	chr2R	6584892	intron	jing +	chr2R_6_6580001	chr2R_6580001	RAL-802_95b
383	chr2R	6579787	6579797	chr2R	6584859	6584894	flea	4	5093	4.5	1.0	2.8	1.1	5107	chr2R	6579787	intron	jing +	chr2R	6582340	intron	jing +	chr2R	6584894	intron	jing +	chr2R_4_6580001	chr2R_6580001	RAL-802_95b
393	chr2R	6952149	6952184	chr2R	6959749	6959794	opus	7	7604	4.0	1.5	2.8	1.8	7645	chr2R	6952149	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955972	intron,intron	mim -,CheB42c -	chr2R	6959794	intron,intron	mim -,CheB42c -	chr2R_7_6955001	chr2R_6955001	RAL-802_95b
395	chr2R	7196562	7196601	chr2R	7201356	7201396	F-element	7	4795	3.0	7.5	5.2	1.1	4834	chr2R	7196562	intron	pk +	chr2R	7198979	intron	pk +	chr2R	7201396	intron	pk +	chr2R_7_7195001	chr2R_7195001	RAL-802_95b
397	chr2R	7434881	7434899	chr2R	7439202	7439220	Juan	4	4318	2.5	8.5	5.5	0.6	4339	chr2R	7434881	intergenic	so +	chr2R	7437050	intergenic	not near genes	chr2R	7439220	intergenic	not near genes	chr2R_4_7435001	chr2R_7435001	RAL-802_95b
400	chr2R	7608386	7608435	chr2R	7613609	7613618	I-element	9	5211	0.5	0.5	0.5	6.0	5232	chr2R	7608386	intron	CG1358 -	chr2R	7611002	intron	CG1358 -	chr2R	7613618	intron	CG1358 -	chr2R_9_7610001	chr2R_7610001	RAL-802_95b
405	chr2R	7815659	7815698	chr2R	7822148	7822187	Burdock	11	6487	0.5	4.0	2.2	3.4	6528	chr2R	7815659	intergenic	CG1882 +	chr2R	7818923	intergenic	not near genes	chr2R	7822187	3` UTR	cathD -	chr2R_11_7815001	chr2R_7815001	RAL-802_95b
413	chr2R	8330853	8330890	chr2R	8331359	8331396	roo	8	500	2.5	3.0	2.8	2.1	543	chr2R	8330853	intron	pdm3 +	chr2R	8331124	intron	pdm3 +	chr2R	8331396	intron	pdm3 +	chr2R_8_8330001	chr2R_8330001	RAL-802_95b
417	chr2R	8722742	8722794	chr2R	8723003	8723004	pogo	10	244	1.0	0.5	0.8	5.6	262	chr2R	8722742	intron	CG14767 -	chr2R	8722873	intron	CG14767 -	chr2R	8723004	intron	CG14767 -	chr2R_10_8720001	chr2R_8720001	RAL-802_95b
421	chr2R	9151308	9151324	chr2R	9157782	9157809	Burdock	6	6483	3.0	5.5	4.2	1.2	6501	chr2R	9151308	3` UTR	CG30345 +	chr2R	9154558	intergenic	not near genes	chr2R	9157809	intergenic	CG8008 -	chr2R_6_9150001	chr2R_9150001	RAL-802_95b
425	chr2R	9480059	9480099	chr2R	9490610	9490650	roo	12	10548	4.0	4.0	4.0	2.4	10591	chr2R	9480059	intergenic	not near genes	chr2R	9485354	intergenic	not near genes	chr2R	9490650	intergenic	not near genes	chr2R_12_9485001	chr2R_9485001	RAL-802_95b
426	chr2R	9726600	9726613	chr2R	9734171	9734184	17.6	6	7571	6.0	9.0	7.5	0.7	7584	chr2R	9726600	intron	sqa -	chr2R	9730392	intron	sqa -	chr2R	9734184	intron	sqa -	chr2R_6_9730001	chr2R_9730001	RAL-802_95b
427	chr2R	9726616	9726639	chr2R	9734162	9734210	17.6	8	7564	4.0	6.5	5.2	1.3	7594	chr2R	9726616	intron	sqa -	chr2R	9730413	intron	sqa -	chr2R	9734210	intron	sqa -	chr2R_8_9730001	chr2R_9730001	RAL-802_95b
429	chr2R	10176862	10176908	chr2R	10186044	10186094	roo	12	9184	5.0	4.0	4.5	2.2	9232	chr2R	10176862	intron	KCNQ -	chr2R	10181478	intron	KCNQ -	chr2R	10186094	intron	KCNQ -	chr2R_12_10180001	chr2R_10180001	RAL-802_95b
438	chr2R	10622358	10622366	chr2R	10637119	10637145	mdg1	4	14770	3.5	1.0	2.2	1.2	14787	chr2R	10622358	intron	CG11883 +	chr2R	10629752	intron	CG11883 +	chr2R	10637145	intron	CG11883 +	chr2R_4_10625001	chr2R_10625001	RAL-802_95b
446	chr2R	11207811	11207845	chr2R	11208024	11208038	BS	9	207	4.0	7.5	5.8	1.3	227	chr2R	11207811	intron	shn +	chr2R	11207924	intron	shn +	chr2R	11208038	intron	shn +	chr2R_9_11205001	chr2R_11205001	RAL-802_95b
447	chr2R	11297597	11297642	chr2R	11301938	11301983	flea	7	4337	4.0	1.5	2.8	1.8	4386	chr2R	11297597	intergenic	CG42336 -	chr2R	11299790	intergenic	not near genes	chr2R	11301983	5` UTR	CG7741 +	chr2R_7_11295001	chr2R_11295001	RAL-802_95b
448	chr2R	11472645	11472664	chr2R	11473857	11473880	pogo	4	1216	5.5	2.0	3.8	0.8	1235	chr2R	11472645	intergenic	not near genes	chr2R	11473262	intergenic	not near genes	chr2R	11473880	intergenic	not near genes	chr2R_4_11470001	chr2R_11470001	RAL-802_95b
462	chr2R	12707518	12707543	chr2R	12715889	12715929	roo	8	8380	3.0	2.5	2.8	2.1	8411	chr2R	12707518	intron	CG42663 +	chr2R	12711724	intron	CG42663 +	chr2R	12715929	intron	CG42663 +	chr2R_8_12710001	chr2R_12710001	RAL-802_95b
474	chr2R	13728124	13728165	chr2R	13735794	13735832	opus	11	7675	2.5	4.5	3.5	2.4	7708	chr2R	13728124	intron	fas +	chr2R	13731978	intron	fas +	chr2R	13735832	intron	fas +	chr2R_11_13730001	chr2R_13730001	RAL-802_95b
489	chr2R	15004727	15004751	chr2R	15005058	15005100	jockey	7	343	1.5	3.5	2.5	2.0	373	chr2R	15004727	intergenic	not near genes	chr2R	15004914	intergenic	not near genes	chr2R	15005100	intergenic	not near genes	chr2R_7_15000001	chr2R_15000001	RAL-802_95b
490	chr2R	15015444	15015479	chr2R	15022888	15022923	mdg1	7	7437	2.0	2.5	2.2	2.2	7479	chr2R	15015444	intron	hbs +	chr2R	15019184	intron	hbs +	chr2R	15022923	intron	hbs +	chr2R_7_15015001	chr2R_15015001	RAL-802_95b
491	chr2R	15119299	15119340	chr2R	15127800	15127820	Tirant	4	8494	4.0	3.5	3.8	0.8	8521	chr2R	15119299	intron	chn +	chr2R	15123560	intron	chn +	chr2R	15127820	intron	chn +	chr2R_4_15120001	chr2R_15120001	RAL-802_95b
499	chr2R	16539623	16539666	chr2R	16544852	16544891	copia	13	5224	3.5	4.5	4.0	2.6	5268	chr2R	16539623	intergenic	not near genes	chr2R	16542257	intergenic	not near genes	chr2R	16544891	intergenic	not near genes	chr2R_13_16540001	chr2R_16540001	RAL-802_95b
506	chr2R	17147226	17147265	chr2R	17152277	17152316	jockey	12	5044	4.0	2.5	3.2	2.9	5090	chr2R	17147226	intergenic	not near genes	chr2R	17149771	intergenic	not near genes	chr2R	17152316	intergenic	not near genes	chr2R_12_17145001	chr2R_17145001	RAL-802_95b
507	chr2R	17176363	17176385	chr2R	17182573	17182595	diver	6	6210	0.5	5.0	2.8	1.6	6232	chr2R	17176363	intergenic	not near genes	chr2R	17179479	intergenic	not near genes	chr2R	17182595	intergenic	not near genes	chr2R_6_17175001	chr2R_17175001	RAL-802_95b
508	chr2R	17236492	17236534	chr2R	17241716	17241748	copia	7	5219	1.5	4.0	2.8	1.8	5256	chr2R	17236492	intron	mbl +	chr2R	17239120	intron	mbl +	chr2R	17241748	intron	mbl +	chr2R_7_17235001	chr2R_17235001	RAL-802_95b
510	chr2R	17485909	17485949	chr2R	17490699	17490737	F-element	8	4788	2.5	4.5	3.5	1.8	4828	chr2R	17485909	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488323	intron	NT5E-2 +	chr2R	17490737	intron	NT5E-2 +	chr2R_8_17485001	chr2R_17485001	RAL-802_95b
516	chr2R	17782345	17782391	chr2R	17783568	17783604	pogo	10	1221	5.0	1.5	3.2	2.4	1259	chr2R	17782345	intergenic	CG33981 -,fab1 -	chr2R	17782974	intergenic	not near genes	chr2R	17783604	intergenic	mir-31a -	chr2R_10_17780001	chr2R_17780001	RAL-802_95b
517	chr2R	17784017	17784053	chr2R	17784278	17784298	pogo	5	258	3.5	1.5	2.5	1.4	281	chr2R	17784017	intergenic	mir-31a -	chr2R	17784158	intergenic	mir-31a -	chr2R	17784298	intergenic	mir-31a -	chr2R_5_17780001	chr2R_17780001	RAL-802_95b
524	chr2R	18045652	18045677	chr2R	18046024	18046049	jockey	9	371	1.5	5.5	3.5	2.0	397	chr2R	18045652	intergenic	not near genes	chr2R	18045850	intergenic	not near genes	chr2R	18046049	intergenic	CG5767 -	chr2R_9_18045001	chr2R_18045001	RAL-802_95b
525	chr2R	18045679	18045700	chr2R	18046023	18046072	jockey	6	362	1.5	5.5	3.5	1.3	393	chr2R	18045679	intergenic	not near genes	chr2R	18045876	intergenic	not near genes	chr2R	18046072	intergenic	CG5767 -	chr2R_6_18045001	chr2R_18045001	RAL-802_95b
526	chr2R	18111680	18111697	chr2R	18115557	18115585	F-element	5	3884	5.5	4.0	4.8	0.9	3905	chr2R	18111680	intergenic	not near genes	chr2R	18113632	intergenic	not near genes	chr2R	18115585	intergenic	not near genes	chr2R_5_18110001	chr2R_18110001	RAL-802_95b
527	chr2R	18111698	18111714	chr2R	18115554	18115582	F-element	12	3879	3.5	3.5	3.5	2.7	3884	chr2R	18111698	intergenic	not near genes	chr2R	18113640	intergenic	not near genes	chr2R	18115582	intergenic	not near genes	chr2R_12_18110001	chr2R_18110001	RAL-802_95b
532	chr2R	18575811	18575827	chr2R	18581983	18582035	3S18	10	6186	0.5	2.5	1.5	4.0	6224	chr2R	18575811	intron	GEFmeso -	chr2R	18578923	intron	GEFmeso -	chr2R	18582035	intron	GEFmeso -	chr2R_10_18575001	chr2R_18575001	RAL-802_95b
549	chr2R	19776581	19776627	chr2R	19779918	19779963	jockey	9	3339	1.5	2.0	1.8	3.2	3382	chr2R	19776581	intergenic	not near genes	chr2R	19778272	intergenic	not near genes	chr2R	19779963	intergenic	not near genes	chr2R_9_19775001	chr2R_19775001	RAL-802_95b
550	chr2R	19914830	19914867	chr2R	19922262	19922299	mdg1	4	7429	7.0	1.0	4.0	0.8	7469	chr2R	19914830	intergenic	not near genes	chr2R	19918564	intergenic	not near genes	chr2R	19922299	intergenic	not near genes	chr2R_4_19915001	chr2R_19915001	RAL-802_95b
553	chr2R	20069226	20069258	chr2R	20071876	20071908	opus	7	2649	2.5	0.5	1.5	2.8	2682	chr2R	20069226	intergenic	not near genes	chr2R	20070567	intergenic	not near genes	chr2R	20071908	intergenic	not near genes	chr2R_7_20070001	chr2R_20070001	RAL-802_95b
571	chr2R	21753079	21753106	chr2R	21753574	21753601	roo	8	501	3.5	5.0	4.2	1.5	522	chr2R	21753079	intergenic	not near genes	chr2R	21753340	intergenic	not near genes	chr2R	21753601	intergenic	not near genes	chr2R_8_21750001	chr2R_21750001	RAL-802_95b
572	chr2R	21809509	21809550	chr2R	21817769	21817810	roo	8	8252	4.0	3.5	3.8	1.7	8301	chr2R	21809509	intergenic	not near genes	chr2R	21813660	intergenic	not near genes	chr2R	21817810	intergenic	not near genes	chr2R_8_21810001	chr2R_21810001	RAL-802_95b
580	chr2R	22349674	22349718	chr2R	22351478	22351522	jockey	7	1798	2.0	1.0	1.5	2.8	1848	chr2R	22349674	intron	Liprin-gamma -	chr2R	22350598	intron	Liprin-gamma -	chr2R	22351522	intron	Liprin-gamma -	chr2R_7_22350001	chr2R_22350001	RAL-802_95b
583	chr2R	22774958	22774982	chr2R	22775386	22775421	jockey	5	436	6.0	4.5	5.2	0.8	463	chr2R	22774958	intron	CG42260 -	chr2R	22775190	intron	CG42260 -	chr2R	22775421	intron	CG42260 -	chr2R_5_22775001	chr2R_22775001	RAL-802_95b
595	chr2R	23914316	23914331	chr2R	23921935	23921975	412	4	7624	1.0	3.5	2.2	1.2	7659	chr2R	23914316	exon	kcc +	chr2R	23918146	intron	kcc +	chr2R	23921975	exon	kcc +	chr2R_4_23915001	chr2R_23915001	RAL-802_95b
598	chr2R	24177215	24177265	chr2R	24184720	24184770	412	11	7504	7.0	4.0	5.5	1.7	7555	chr2R	24177215	3` UTR	Nop60B +	chr2R	24180992	intron	Nop60B +	chr2R	24184770	3` UTR	Nop60B +	chr2R_11_24180001	chr2R_24180001	RAL-802_95b
600	chr2R	24353408	24353458	chr2R	24361790	24361807	roo	5	8375	1.0	1.5	1.2	2.3	8399	chr2R	24353408	intron,intron	bs +,CR44811 -	chr2R	24357608	intron,intron	bs +,CR44811 -	chr2R	24361807	intron,intron	bs +,CR44811 -	chr2R_5_24355001	chr2R_24355001	RAL-802_95b
614	chr3L	110194	110241	chr3L	119381	119402	roo	8	9180	4.5	1.5	3.0	2.0	9208	chr3L	110194	intergenic	not near genes	chr3L	114798	intergenic	not near genes	chr3L	119402	intergenic	not near genes	chr3L_8_110001	chr3L_110001	RAL-802_95b
616	chr3L	402687	402709	chr3L	409744	409782	297	4	7064	0.0	2.0	1.0	2.0	7095	chr3L	402687	intergenic	not near genes	chr3L	406234	intergenic	not near genes	chr3L	409782	intergenic	not near genes	chr3L_4_405001	chr3L_405001	RAL-802_95b
622	chr3L	789899	789931	chr3L	790404	790436	roo	8	505	4.5	1.5	3.0	2.0	537	chr3L	789899	intergenic	not near genes	chr3L	790168	intergenic	not near genes	chr3L	790436	intergenic	not near genes	chr3L_8_790001	chr3L_790001	RAL-802_95b
625	chr3L	925158	925210	chr3L	932604	932646	mdg1	7	7435	2.0	4.5	3.2	1.7	7488	chr3L	925158	intron	Glut1 +	chr3L	928902	intron	Glut1 +	chr3L	932646	intron	Glut1 +	chr3L_7_925001	chr3L_925001	RAL-802_95b
627	chr3L	939765	939802	chr3L	940906	940918	jockey	7	1134	2.0	4.0	3.0	1.8	1153	chr3L	939765	intron	Glut1 +	chr3L	940342	intron	Glut1 +	chr3L	940918	intron	Glut1 +	chr3L_7_940001	chr3L_940001	RAL-802_95b
630	chr3L	1154123	1154151	chr3L	1163293	1163321	roo	4	9170	1.5	1.0	1.2	1.8	9198	chr3L	1154123	intron	bab2 -	chr3L	1158722	intron	bab2 -	chr3L	1163321	intron	bab2 -	chr3L_4_1155001	chr3L_1155001	RAL-802_95b
631	chr3L	1154152	1154160	chr3L	1163289	1163322	roo	4	9154	1.0	1.0	1.0	2.0	9170	chr3L	1154152	intron	bab2 -	chr3L	1158737	intron	bab2 -	chr3L	1163322	intron	bab2 -	chr3L_4_1155001	chr3L_1155001	RAL-802_95b
638	chr3L	1740853	1740883	chr3L	1741102	1741148	pogo	5	261	2.5	3.5	3.0	1.2	295	chr3L	1740853	intron	Gk +	chr3L	1741000	intron	Gk +	chr3L	1741148	intron	Gk +	chr3L_5_1740001	chr3L_1740001	RAL-802_95b
641	chr3L	2108245	2108273	chr3L	2113461	2113497	copia	7	5223	2.0	2.5	2.2	2.2	5252	chr3L	2108245	intron	sls -	chr3L	2110871	intron	sls -	chr3L	2113497	intron	sls -	chr3L_7_2110001	chr3L_2110001	RAL-802_95b
648	chr3L	2751451	2751473	chr3L	2755756	2755768	F-element	4	4308	7.0	3.5	5.2	0.6	4317	chr3L	2751451	intron	Mrtf -	chr3L	2753610	intron	Mrtf -	chr3L	2755768	intron	Mrtf -	chr3L_4_2750001	chr3L_2750001	RAL-802_95b
652	chr3L	2966712	2966719	chr3L	2974157	2974164	mdg1	5	7445	8.0	5.5	6.8	0.6	7452	chr3L	2966712	intergenic	not near genes	chr3L	2970438	intergenic	not near genes	chr3L	2974164	intergenic	not near genes	chr3L_5_2970001	chr3L_2970001	RAL-802_95b
654	chr3L	3051723	3051745	chr3L	3051985	3051987	pogo	4	257	11.5	0.0	5.8	0.6	264	chr3L	3051723	3` UTR	CG32485 +	chr3L	3051855	intergenic	CG32485 +	chr3L	3051987	intergenic	CG32485 +	chr3L_4_3050001	chr3L_3050001	RAL-802_95b
662	chr3L	3475072	3475100	chr3L	3475532	3475558	jockey	6	454	0.5	1.5	1.0	3.0	486	chr3L	3475072	intron	CG42324 +	chr3L	3475315	intron	CG42324 +	chr3L	3475558	intron	CG42324 +	chr3L_6_3475001	chr3L_3475001	RAL-802_95b
668	chr3L	3601283	3601332	chr3L	3606614	3606663	copia	7	5329	0.0	4.0	2.0	2.3	5380	chr3L	3601283	intron	Eip63E +	chr3L	3603973	intron	Eip63E +	chr3L	3606663	intron	Eip63E +	chr3L_7_3600001	chr3L_3600001	RAL-802_95b
679	chr3L	4328724	4328748	chr3L	4336242	4336266	412	4	7516	3.5	5.0	4.2	0.8	7542	chr3L	4328724	intron	Cip4 -	chr3L	4332495	intron	Cip4 -	chr3L	4336266	intron	Cip4 -	chr3L_4_4330001	chr3L_4330001	RAL-802_95b
681	chr3L	4901137	4901153	chr3L	4907316	4907358	diver	4	6201	4.5	1.0	2.8	1.1	6221	chr3L	4901137	intergenic	CG13704 +	chr3L	4904248	intergenic	not near genes	chr3L	4907358	intergenic	not near genes	chr3L_4_4900001	chr3L_4900001	RAL-802_95b
684	chr3L	5034168	5034191	chr3L	5043310	5043358	roo	4	9163	1.5	4.5	3.0	1.0	9190	chr3L	5034168	intron	Con -	chr3L	5038763	intron	Con -	chr3L	5043358	intron	Con -	chr3L_4_5035001	chr3L_5035001	RAL-802_95b
685	chr3L	5045453	5045469	chr3L	5050254	5050270	Doc	4	4800	5.0	1.5	3.2	1.0	4817	chr3L	5045453	intron	Con -	chr3L	5047862	intron	Con -	chr3L	5050270	intron	Con -	chr3L_4_5045001	chr3L_5045001	RAL-802_95b
686	chr3L	5045472	5045480	chr3L	5050238	5050271	Doc	4	4783	3.5	1.5	2.5	1.1	4799	chr3L	5045472	intron	Con -	chr3L	5047872	intron	Con -	chr3L	5050271	intron	Con -	chr3L_4_5045001	chr3L_5045001	RAL-802_95b
696	chr3L	5910014	5910058	chr3L	5910275	5910319	pogo	8	259	6.5	3.5	5.0	1.3	305	chr3L	5910014	intron	CG13288 +	chr3L	5910166	intron	CG13288 +	chr3L	5910319	intron	CG13288 +	chr3L_8_5910001	chr3L_5910001	RAL-802_95b
697	chr3L	6001673	6001716	chr3L	6004383	6004431	jockey	10	2716	1.0	2.0	1.5	4.0	2758	chr3L	6001673	intron	PVRAP +	chr3L	6003052	intron	PVRAP +	chr3L	6004431	intron	PVRAP +	chr3L_10_6000001	chr3L_6000001	RAL-802_95b
702	chr3L	6220897	6220928	chr3L	6230069	6230100	roo	6	9166	2.0	2.0	2.0	2.0	9203	chr3L	6220897	5` UTR	pncr008:3L +	chr3L	6225498	intergenic	not near genes	chr3L	6230100	intergenic	not near genes	chr3L_6_6225001	chr3L_6225001	RAL-802_95b
703	chr3L	6334999	6335034	chr3L	6335480	6335525	297	6	484	1.0	2.0	1.5	2.4	526	chr3L	6334999	intron	CG13300 -	chr3L	6335262	intron	CG13300 -	chr3L	6335525	intron	CG13300 -	chr3L_6_6335001	chr3L_6335001	RAL-802_95b
704	chr3L	6405643	6405687	chr3L	6432127	6432171	roo	7	26483	2.0	4.0	3.0	1.8	26528	chr3L	6405643	intron	CG42747 +	chr3L	6418907	intron	CG42747 +	chr3L	6432171	intron	CG42747 +	chr3L_7_6415001	chr3L_6415001	RAL-802_95b
707	chr3L	6887505	6887531	chr3L	6895017	6895041	roo	5	7512	6.0	4.5	5.2	0.8	7536	chr3L	6887505	intergenic	not near genes	chr3L	6891273	intergenic	not near genes	chr3L	6895041	intergenic	not near genes	chr3L_5_6890001	chr3L_6890001	RAL-802_95b
710	chr3L	6994907	6994917	chr3L	6995538	6995544	BS	4	630	0.5	5.0	2.8	1.1	637	chr3L	6994907	intergenic	bin +	chr3L	6995226	intergenic	not near genes	chr3L	6995544	intergenic	not near genes	chr3L_4_6995001	chr3L_6995001	RAL-802_95b
717	chr3L	7377302	7377343	chr3L	7380422	7380435	297	9	3119	3.0	1.5	2.2	2.8	3133	chr3L	7377302	intron	SMSr -	chr3L	7378868	intron	SMSr -	chr3L	7380435	intron	SMSr -	chr3L_9_7375001	chr3L_7375001	RAL-802_95b
718	chr3L	7498748	7498785	chr3L	7503545	7503582	F-element	12	4796	2.5	5.5	4.0	2.4	4834	chr3L	7498748	5` UTR	CG8539 -	chr3L	7501165	intergenic	not near genes	chr3L	7503582	intergenic	not near genes	chr3L_12_7500001	chr3L_7500001	RAL-802_95b
719	chr3L	7793697	7793733	chr3L	7800769	7800805	297	7	7071	4.5	2.0	3.2	1.7	7108	chr3L	7793697	intron	CG32369 -	chr3L	7797251	intron	CG32369 -	chr3L	7800805	intron	CG32369 -	chr3L_7_7795001	chr3L_7795001	RAL-802_95b
720	chr3L	7886497	7886546	chr3L	7889035	7889084	Stalker4	5	2531	1.0	2.0	1.5	2.0	2587	chr3L	7886497	intron	CG32365 +	chr3L	7887790	intron	CG32365 +	chr3L	7889084	intron	CG32365 +	chr3L_5_7885001	chr3L_7885001	RAL-802_95b
721	chr3L	7916827	7916860	chr3L	7926008	7926051	roo	8	9187	4.0	8.5	6.2	1.1	9224	chr3L	7916827	3` UTR	syd -	chr3L	7921439	intron	syd -	chr3L	7926051	3` UTR	syd -	chr3L_8_7920001	chr3L_7920001	RAL-802_95b
722	chr3L	7985359	7985394	chr3L	7987707	7987727	NOF	6	2345	3.0	2.0	2.5	1.7	2368	chr3L	7985359	intron	nmo +	chr3L	7986543	intron	nmo +	chr3L	7987727	intron	nmo +	chr3L_6_7985001	chr3L_7985001	RAL-802_95b
723	chr3L	8019680	8019732	chr3L	8024114	8024164	NOF	6	4433	2.5	0.5	1.5	2.4	4484	chr3L	8019680	intron	nmo +	chr3L	8021922	intron	nmo +	chr3L	8024164	intron	nmo +	chr3L_6_8020001	chr3L_8020001	RAL-802_95b
728	chr3L	8498304	8498321	chr3L	8505791	8505808	blood	4	7487	0.0	8.0	4.0	0.8	7504	chr3L	8498304	intron	CG43163 -	chr3L	8502056	intron	CG43163 -	chr3L	8505808	intron	CG43163 -	chr3L_4_8500001	chr3L_8500001	RAL-802_95b
735	chr3L	8791259	8791299	chr3L	8796699	8796739	I-element	12	5439	1.5	3.0	2.2	3.8	5480	chr3L	8791259	exon	Fhos +	chr3L	8793999	intron	Fhos +	chr3L	8796739	intron	Fhos +	chr3L_12_8790001	chr3L_8790001	RAL-802_95b
740	chr3L	9076924	9076959	chr3L	9084485	9084534	412	7	7572	4.0	0.5	2.2	2.2	7610	chr3L	9076924	exon	Tequila +	chr3L	9080729	intron	Tequila +	chr3L	9084534	exon	Tequila +	chr3L_7_9080001	chr3L_9080001	RAL-802_95b
742	chr3L	9164691	9164727	chr3L	9166163	9166187	hobo	7	1474	1.0	1.5	1.2	3.2	1496	chr3L	9164691	intron	Rdl -	chr3L	9165439	intron	Rdl -	chr3L	9166187	intron	Rdl -	chr3L_7_9165001	chr3L_9165001	RAL-802_95b
747	chr3L	9501686	9501729	chr3L	9502192	9502235	roo	9	505	0.5	6.0	3.2	2.1	549	chr3L	9501686	intron	path -	chr3L	9501960	intron	path -	chr3L	9502235	intron	path -	chr3L_9_9500001	chr3L_9500001	RAL-802_95b
748	chr3L	9571886	9571916	chr3L	9572254	9572264	jockey	7	362	6.0	4.0	5.0	1.2	378	chr3L	9571886	intron	CG42673 +	chr3L	9572075	intron	CG42673 +	chr3L	9572264	intron	CG42673 +	chr3L_7_9570001	chr3L_9570001	RAL-802_95b
749	chr3L	9575903	9575936	chr3L	9581001	9581035	jockey	5	5094	1.5	1.0	1.2	2.3	5132	chr3L	9575903	intron	CG42673 +	chr3L	9578469	intron	CG42673 +	chr3L	9581035	intron	CG42673 +	chr3L_5_9575001	chr3L_9575001	RAL-802_95b
754	chr3L	9929679	9929701	chr3L	9938459	9938496	roo	6	8792	1.5	3.5	2.5	1.7	8817	chr3L	9929679	intron	CG34356 +	chr3L	9934088	intron	CG34356 +	chr3L	9938496	intron	CG34356 +	chr3L_6_9930001	chr3L_9930001	RAL-802_95b
770	chr3L	11105284	11105307	chr3L	11107015	11107033	X-element	6	1730	4.5	0.5	2.5	1.7	1749	chr3L	11105284	intergenic	not near genes	chr3L	11106158	intergenic	not near genes	chr3L	11107033	exon	CG32073 -	chr3L_6_11105001	chr3L_11105001	RAL-802_95b
774	chr3L	11264468	11264497	chr3L	11271419	11271454	17.6	6	6965	1.5	2.0	1.8	2.1	6986	chr3L	11264468	intergenic	not near genes	chr3L	11267961	intergenic	not near genes	chr3L	11271454	intergenic	not near genes	chr3L_6_11265001	chr3L_11265001	RAL-802_95b
782	chr3L	11723068	11723105	chr3L	11727883	11727915	Doc	9	4813	3.0	6.5	4.8	1.6	4847	chr3L	11723068	3` UTR	Bmcp +	chr3L	11725492	intron	Bmcp +	chr3L	11727915	3` UTR	Bmcp +	chr3L_9_11725001	chr3L_11725001	RAL-802_95b
803	chr3L	12874936	12874950	chr3L	12877218	12877262	jockey	4	2300	1.0	4.0	2.5	1.1	2326	chr3L	12874936	intergenic	not near genes	chr3L	12876099	intergenic	not near genes	chr3L	12877262	intergenic	not near genes	chr3L_4_12875001	chr3L_12875001	RAL-802_95b
804	chr3L	12957776	12957820	chr3L	12962271	12962310	copia	8	4499	2.0	2.0	2.0	2.7	4534	chr3L	12957776	intergenic	not near genes	chr3L	12960043	intergenic	not near genes	chr3L	12962310	intergenic	not near genes	chr3L_8_12960001	chr3L_12960001	RAL-802_95b
811	chr3L	13804524	13804574	chr3L	13822830	13822861	roo	10	18297	2.0	0.0	1.0	5.0	18337	chr3L	13804524	intergenic	not near genes	chr3L	13813692	intergenic	not near genes	chr3L	13822861	intergenic	not near genes	chr3L_10_13810001	chr3L_13810001	RAL-802_95b
817	chr3L	14245573	14245587	chr3L	14245672	14245679	1360	5	105	2.0	1.5	1.8	1.8	106	chr3L	14245573	3` UTR	CR44561 -	chr3L	14245626	3` UTR	CR44561 -	chr3L	14245679	3` UTR	CR44561 -	chr3L_5_14245001	chr3L_14245001	RAL-802_95b
823	chr3L	14468446	14468475	chr3L	14473659	14473696	copia	8	5222	3.5	4.5	4.0	1.6	5250	chr3L	14468446	intron	bbg -	chr3L	14471071	intron	bbg -	chr3L	14473696	intron	bbg -	chr3L_8_14470001	chr3L_14470001	RAL-802_95b
834	chr3L	14970741	14970761	chr3L	14971071	14971091	F-element	8	330	9.5	5.0	7.2	1.0	350	chr3L	14970741	intergenic	Tom +	chr3L	14970916	intergenic	not near genes	chr3L	14971091	intergenic	not near genes	chr3L_8_14970001	chr3L_14970001	RAL-802_95b
835	chr3L	15085034	15085058	chr3L	15086220	15086244	1360	4	1185	9.0	2.0	5.5	0.6	1210	chr3L	15085034	intron	cp309 -	chr3L	15085639	intron	cp309 -	chr3L	15086244	intron	cp309 -	chr3L_4_15085001	chr3L_15085001	RAL-802_95b
839	chr3L	15295777	15295798	chr3L	15298633	15298661	gypsy5	7	2857	5.5	9.0	7.2	0.9	2884	chr3L	15295777	intergenic	not near genes	chr3L	15297219	intergenic	not near genes	chr3L	15298661	intergenic	Best4 +	chr3L_7_15295001	chr3L_15295001	RAL-802_95b
841	chr3L	15423744	15423780	chr3L	15426608	15426641	opus	6	2863	4.0	2.5	3.2	1.4	2897	chr3L	15423744	intergenic	not near genes	chr3L	15425192	intergenic	not near genes	chr3L	15426641	intergenic	not near genes	chr3L_6_15425001	chr3L_15425001	RAL-802_95b
851	chr3L	16184095	16184127	chr3L	16188927	16188951	X-element	9	4831	1.0	1.5	1.2	4.1	4856	chr3L	16184095	intergenic	not near genes	chr3L	16186523	intergenic	not near genes	chr3L	16188951	intergenic	not near genes	chr3L_9_16185001	chr3L_16185001	RAL-802_95b
856	chr3L	16443844	16443876	chr3L	16446188	16446221	Doc	8	2355	0.0	2.0	1.0	4.0	2377	chr3L	16443844	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445032	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446221	intron,intron	CG33158 +,dsx-c73A -	chr3L_8_16445001	chr3L_16445001	RAL-802_95b
864	chr3L	16684001	16684049	chr3L	16689242	16689280	copia	13	5235	4.0	3.5	3.8	2.7	5279	chr3L	16684001	intron,intron	Lasp -,CG43954 -	chr3L	16686640	intron,intron	Lasp -,CG43954 -	chr3L	16689280	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_13_16685001	chr3L_16685001	RAL-802_95b
874	chr3L	16945738	16945758	chr3L	16954890	16954916	roo	4	9151	2.0	1.5	1.8	1.4	9178	chr3L	16945738	exon	Obp73a +	chr3L	16950327	intergenic	not near genes	chr3L	16954916	5` UTR	Nc73EF +	chr3L_4_16950001	chr3L_16950001	RAL-802_95b
876	chr3L	17034927	17034961	chr3L	17035135	17035169	G2	7	207	3.5	5.5	4.5	1.3	242	chr3L	17034927	intergenic	not near genes	chr3L	17035048	intergenic	not near genes	chr3L	17035169	intergenic	beg +	chr3L_7_17035001	chr3L_17035001	RAL-802_95b
877	chr3L	17084987	17085032	chr3L	17094156	17094201	roo	12	9165	3.0	4.0	3.5	2.7	9214	chr3L	17084987	intron	Rbp6 -	chr3L	17089594	intron	Rbp6 -	chr3L	17094201	intron	Rbp6 -	chr3L_12_17085001	chr3L_17085001	RAL-802_95b
883	chr3L	17730836	17730846	chr3L	17738186	17738196	mdg1	4	7350	8.0	4.5	6.2	0.6	7360	chr3L	17730836	intron	Ccn +	chr3L	17734516	intron	Ccn +	chr3L	17738196	intron	Ccn +	chr3L_4_17730001	chr3L_17730001	RAL-802_95b
884	chr3L	17730848	17730879	chr3L	17738183	17738229	mdg1	6	7343	6.0	4.0	5.0	1.0	7381	chr3L	17730848	intron	Ccn +	chr3L	17734538	intron	Ccn +	chr3L	17738229	intron	Ccn +	chr3L_6_17730001	chr3L_17730001	RAL-802_95b
887	chr3L	17799790	17799842	chr3L	17801597	17801649	S-element	12	1804	3.0	2.0	2.5	3.4	1859	chr3L	17799790	intron	NUCB1 -	chr3L	17800720	intron	NUCB1 -	chr3L	17801649	intron	NUCB1 -	chr3L_12_17800001	chr3L_17800001	RAL-802_95b
891	chr3L	17918354	17918398	chr3L	17921174	17921221	opus	5	2822	0.0	2.5	1.2	2.3	2867	chr3L	17918354	intergenic	not near genes	chr3L	17919788	intergenic	not near genes	chr3L	17921221	intergenic	not near genes	chr3L_5_17915001	chr3L_17915001	RAL-802_95b
893	chr3L	18047686	18047734	chr3L	18056763	18056805	roo	10	9075	2.0	2.0	2.0	3.3	9119	chr3L	18047686	intron	Eip75B -	chr3L	18052246	intron	Eip75B -	chr3L	18056805	intron	Eip75B -	chr3L_10_18050001	chr3L_18050001	RAL-802_95b
910	chr3L	18506131	18506161	chr3L	18509594	18509624	F-element	5	3471	5.0	4.5	4.8	0.9	3493	chr3L	18506131	intergenic	not near genes	chr3L	18507878	intergenic	not near genes	chr3L	18509624	intergenic	not near genes	chr3L_5_18505001	chr3L_18505001	RAL-802_95b
911	chr3L	18528626	18528654	chr3L	18537797	18537835	roo	7	9178	5.0	7.0	6.0	1.0	9209	chr3L	18528626	intergenic	not near genes	chr3L	18533230	intergenic	not near genes	chr3L	18537835	intergenic	not near genes	chr3L_7_18530001	chr3L_18530001	RAL-802_95b
912	chr3L	18593932	18593977	chr3L	18595932	18595960	Doc	7	1995	3.0	1.0	2.0	2.3	2028	chr3L	18593932	intergenic	term -	chr3L	18594946	intergenic	not near genes	chr3L	18595960	intergenic	CR45389 +	chr3L_7_18590001	chr3L_18590001	RAL-802_95b
914	chr3L	18710755	18710790	chr3L	18718712	18718762	Stalker2	10	7962	4.0	5.0	4.5	1.8	8007	chr3L	18710755	intergenic	not near genes	chr3L	18714758	intergenic	not near genes	chr3L	18718762	intergenic	not near genes	chr3L_10_18710001	chr3L_18710001	RAL-802_95b
917	chr3L	18772393	18772405	chr3L	18781094	18781106	roo	4	8701	5.0	1.5	3.2	1.0	8713	chr3L	18772393	intron	ftz-f1 -	chr3L	18776750	intron	ftz-f1 -	chr3L	18781106	intron	ftz-f1 -	chr3L_4_18775001	chr3L_18775001	RAL-802_95b
918	chr3L	18772408	18772442	chr3L	18781089	18781122	roo	7	8690	2.0	1.5	1.8	2.5	8714	chr3L	18772408	intron	ftz-f1 -	chr3L	18776765	intron	ftz-f1 -	chr3L	18781122	intron	ftz-f1 -	chr3L_7_18775001	chr3L_18775001	RAL-802_95b
928	chr3L	19008861	19008872	chr3L	19009179	19009195	jockey	4	329	3.5	1.0	2.2	1.2	334	chr3L	19008861	intron	nkd -	chr3L	19009028	intron	nkd -	chr3L	19009195	intron	nkd -	chr3L_4_19005001	chr3L_19005001	RAL-802_95b
932	chr3L	19208039	19208087	chr3L	19209433	19209444	Doc	9	1383	1.0	1.0	1.0	4.5	1405	chr3L	19208039	intron	fz2 -	chr3L	19208742	intron	fz2 -	chr3L	19209444	intron	fz2 -	chr3L_9_19205001	chr3L_19205001	RAL-802_95b
940	chr3L	19861809	19861841	chr3L	19863610	19863629	S-element	5	1797	1.0	2.5	1.8	1.8	1820	chr3L	19861809	5` UTR	CR45433 +	chr3L	19862719	intergenic	not near genes	chr3L	19863629	intergenic	not near genes	chr3L_5_19860001	chr3L_19860001	RAL-802_95b
944	chr3L	20113653	20113666	chr3L	20122930	20122943	roo	4	9277	13.0	5.5	9.2	0.4	9290	chr3L	20113653	intergenic	not near genes	chr3L	20118298	intergenic	not near genes	chr3L	20122943	intergenic	not near genes	chr3L_4_20115001	chr3L_20115001	RAL-802_95b
945	chr3L	20113668	20113679	chr3L	20122924	20122943	roo	4	9264	11.5	4.5	8.0	0.4	9275	chr3L	20113668	intergenic	not near genes	chr3L	20118306	intergenic	not near genes	chr3L	20122943	intergenic	not near genes	chr3L_4_20115001	chr3L_20115001	RAL-802_95b
949	chr3L	20476744	20476783	chr3L	20484353	20484401	springer	6	7609	4.0	0.5	2.2	1.9	7657	chr3L	20476744	3` UTR	isoQC +	chr3L	20480572	intergenic	not near genes	chr3L	20484401	3` UTR	ZnT77C -	chr3L_6_20480001	chr3L_20480001	RAL-802_95b
952	chr3L	20821280	20821309	chr3L	20824769	20824778	NOF	9	3485	3.0	5.0	4.0	1.8	3498	chr3L	20821280	intron	Pka-R1 +	chr3L	20823029	intron	Pka-R1 +	chr3L	20824778	intron	Pka-R1 +	chr3L_9_20820001	chr3L_20820001	RAL-802_95b
958	chr3L	21151858	21151897	chr3L	21156952	21157001	flea	7	5103	1.0	4.0	2.5	2.0	5143	chr3L	21151858	intron	Ac78C -	chr3L	21154430	intron	Ac78C -	chr3L	21157001	intron	Ac78C -	chr3L_7_21150001	chr3L_21150001	RAL-802_95b
959	chr3L	21306128	21306176	chr3L	21315307	21315334	roo	9	9175	4.0	4.0	4.0	1.8	9206	chr3L	21306128	3` UTR	CG7632 +	chr3L	21310731	intron	Pc -	chr3L	21315334	3` UTR	Pc -	chr3L_9_21310001	chr3L_21310001	RAL-802_95b
968	chr3L	22099666	22099702	chr3L	22105862	22105908	3S18	10	6204	0.5	2.0	1.2	4.5	6242	chr3L	22099666	intergenic	not near genes	chr3L	22102787	intergenic	not near genes	chr3L	22105908	intergenic	not near genes	chr3L_10_22100001	chr3L_22100001	RAL-802_95b
974	chr3L	22617191	22617210	chr3L	22624663	22624682	blood	4	7472	1.0	2.5	1.8	1.4	7491	chr3L	22617191	intron	CG14459 -	chr3L	22620936	intron	CG14459 -	chr3L	22624682	intron	CG14459 -	chr3L_4_22620001	chr3L_22620001	RAL-802_95b
977	chr3L	22761376	22761386	chr3L	22766830	22766840	Ivk	4	5454	7.0	6.5	6.8	0.5	5464	chr3L	22761376	intron	SPoCk +	chr3L	22764108	intron	SPoCk +	chr3L	22766840	intron	SPoCk +	chr3L_4_22760001	chr3L_22760001	RAL-802_95b
978	chr3L	22761387	22761416	chr3L	22766820	22766870	Ivk	10	5448	5.0	4.0	4.5	1.8	5483	chr3L	22761387	intron	SPoCk +	chr3L	22764128	intron	SPoCk +	chr3L	22766870	intron	SPoCk +	chr3L_10_22760001	chr3L_22760001	RAL-802_95b
982	chr3L	22865968	22866009	chr3L	22867114	22867157	Doc	10	1150	3.5	6.0	4.8	1.7	1189	chr3L	22865968	intron	CG33170 +	chr3L	22866562	intron	CG33170 +	chr3L	22867157	intron	CG33170 +	chr3L_10_22865001	chr3L_22865001	RAL-802_95b
987	chr3L	22989849	22989869	chr3L	22996843	22996843	297	5	6988	2.0	1.5	1.8	1.8	6994	chr3L	22989849	intergenic	not near genes	chr3L	22993346	intergenic	not near genes	chr3L	22996843	intergenic	not near genes	chr3L_5_22990001	chr3L_22990001	RAL-802_95b
988	chr3L	22989873	22989895	chr3L	22996836	22996888	297	8	6981	1.0	1.5	1.2	3.6	7015	chr3L	22989873	intergenic	not near genes	chr3L	22993380	intergenic	not near genes	chr3L	22996888	intergenic	not near genes	chr3L_8_22990001	chr3L_22990001	RAL-802_95b
995	chr3L	24791879	24791925	chr3L	24796678	24796683	Doc	5	4789	0.5	2.5	1.5	2.0	4804	chr3L	24791879	intergenic	not near genes	chr3L	24794281	intergenic	not near genes	chr3L	24796683	intergenic	not near genes	chr3L_5_24790001	chr3L_24790001	RAL-802_95b
999	chr3L	27980684	27980731	chr3L	27985499	27985530	Doc	7	4813	6.5	3.5	5.0	1.2	4846	chr3L	27980684	intron	CG17514 -	chr3L	27983107	intron	CG17514 -	chr3L	27985530	intron	CG17514 -	chr3L_7_27980001	chr3L_27980001	RAL-802_95b
1002	chr3R	4105020	4105064	chr3R	4110244	4110288	copia	4	5224	0.5	2.5	1.5	1.6	5268	chr3R	4105020	intergenic	not near genes	chr3R	4107654	intergenic	not near genes	chr3R	4110288	intergenic	not near genes	chr3R_4_4105001	chr3R_4105001	RAL-802_95b
1003	chr3R	4206083	4206102	chr3R	4211668	4211696	mdg3	7	5589	3.5	7.0	5.2	1.1	5613	chr3R	4206083	intron	CG14636 -	chr3R	4208890	intron	CG14636 -	chr3R	4211696	intron	CG14636 -	chr3R_7_4205001	chr3R_4205001	RAL-802_95b
1004	chr3R	4366748	4366790	chr3R	4375138	4375188	roo	11	8390	2.5	4.0	3.2	2.6	8440	chr3R	4366748	3` UTR	CG1090 +	chr3R	4370968	intergenic	not near genes	chr3R	4375188	5` UTR	CR44922 +	chr3R_11_4370001	chr3R_4370001	RAL-802_95b
1005	chr3R	4408401	4408431	chr3R	4412715	4412735	Juan	4	4312	4.5	4.5	4.5	0.7	4334	chr3R	4408401	intron	CG32944 -	chr3R	4410568	intron	CG32944 -	chr3R	4412735	intron	CG32944 -	chr3R_4_4410001	chr3R_4410001	RAL-802_95b
1008	chr3R	4609541	4609574	chr3R	4610711	4610758	1360	6	1178	1.0	3.0	2.0	2.0	1217	chr3R	4609541	intergenic	not near genes	chr3R	4610150	intergenic	not near genes	chr3R	4610758	intergenic	not near genes	chr3R_6_4610001	chr3R_4610001	RAL-802_95b
1014	chr3R	5045824	5045868	chr3R	5052946	5052990	HMS-Beagle	9	7118	3.0	4.0	3.5	2.0	7166	chr3R	5045824	3` UTR	CR43635 -	chr3R	5049407	intergenic	not near genes	chr3R	5052990	intergenic	CR45588 -	chr3R_9_5045001	chr3R_5045001	RAL-802_95b
1015	chr3R	5067971	5068008	chr3R	5073508	5073545	mdg3	8	5534	4.5	6.5	5.5	1.2	5574	chr3R	5067971	intergenic	not near genes	chr3R	5070758	intergenic	not near genes	chr3R	5073545	intergenic	not near genes	chr3R_8_5070001	chr3R_5070001	RAL-802_95b
1019	chr3R	5338381	5338419	chr3R	5343578	5343616	Rt1c	8	5196	6.0	1.0	3.5	1.8	5235	chr3R	5338381	intron	mtd -	chr3R	5340998	intron	mtd -	chr3R	5343616	intron	mtd -	chr3R_8_5340001	chr3R_5340001	RAL-802_95b
1020	chr3R	5445963	5445985	chr3R	5452422	5452465	Burdock	4	6472	3.0	4.0	3.5	0.9	6502	chr3R	5445963	intron	CG14669 +	chr3R	5449214	intron	CG14669 +	chr3R	5452465	intron	CG14669 +	chr3R_4_5445001	chr3R_5445001	RAL-802_95b
1024	chr3R	5746997	5747044	chr3R	5753208	5753255	diver	14	6208	2.0	3.5	2.8	3.7	6258	chr3R	5746997	intergenic	Madm +	chr3R	5750126	intergenic	not near genes	chr3R	5753255	intergenic	CG2091 -	chr3R_14_5750001	chr3R_5750001	RAL-802_95b
1026	chr3R	5809092	5809141	chr3R	5809353	5809402	pogo	8	254	3.0	4.5	3.8	1.7	310	chr3R	5809092	3` UTR	CG11000 +	chr3R	5809247	3` UTR	CG11000 +	chr3R	5809402	3` UTR	CG11000 +	chr3R_8_5805001	chr3R_5805001	RAL-802_95b
1027	chr3R	5822364	5822411	chr3R	5823551	5823587	1360	7	1184	2.0	4.0	3.0	1.8	1223	chr3R	5822364	3` UTR	CG2023 -	chr3R	5822976	3` UTR	CG2023 -	chr3R	5823587	3` UTR	CG2023 -	chr3R_7_5820001	chr3R_5820001	RAL-802_95b
1029	chr3R	5927568	5927582	chr3R	5927805	5927827	pogo	4	249	2.0	2.0	2.0	1.3	259	chr3R	5927568	intron	CG34113 -	chr3R	5927698	intron	CG34113 -	chr3R	5927827	intron	CG34113 -	chr3R_4_5925001	chr3R_5925001	RAL-802_95b
1032	chr3R	6175153	6175198	chr3R	6182445	6182479	HMS-Beagle2	11	7284	2.0	1.0	1.5	4.4	7326	chr3R	6175153	intergenic	Osi1 +	chr3R	6178816	intron	CR45194 +	chr3R	6182479	intergenic	CR45194 +	chr3R_11_6175001	chr3R_6175001	RAL-802_95b
1038	chr3R	6510009	6510055	chr3R	6515110	6515155	jockey	9	5100	3.5	1.5	2.5	2.6	5146	chr3R	6510009	intergenic	not near genes	chr3R	6512582	intergenic	not near genes	chr3R	6515155	intergenic	not near genes	chr3R_9_6510001	chr3R_6510001	RAL-802_95b
1063	chr3R	7694556	7694608	chr3R	7713637	7713689	invader3	12	19078	1.5	0.5	1.0	6.0	19133	chr3R	7694556	3` UTR	Nlg1 +	chr3R	7704122	intergenic	not near genes	chr3R	7713689	intergenic	not near genes	chr3R_12_7700001	chr3R_7700001	RAL-802_95b
1064	chr3R	7849623	7849666	chr3R	7850810	7850834	1360	6	1181	3.0	4.5	3.8	1.2	1211	chr3R	7849623	intron	CG34384 +	chr3R	7850228	intron	CG34384 +	chr3R	7850834	intron	CG34384 +	chr3R_6_7850001	chr3R_7850001	RAL-802_95b
1067	chr3R	7973301	7973336	chr3R	7974383	7974418	1360	9	1082	2.5	5.0	3.8	1.9	1117	chr3R	7973301	intergenic	not near genes	chr3R	7973860	intergenic	not near genes	chr3R	7974418	3` UTR	CD98hc -	chr3R_9_7970001	chr3R_7970001	RAL-802_95b
1070	chr3R	8094391	8094432	chr3R	8099716	8099747	Transpac	11	5322	4.5	3.0	3.8	2.3	5356	chr3R	8094391	intron	CG7900 +	chr3R	8097069	intron	CG7900 +	chr3R	8099747	intron	CG7900 +	chr3R_11_8095001	chr3R_8095001	RAL-802_95b
1085	chr3R	8894852	8894900	chr3R	8896028	8896060	1360	9	1171	4.5	1.5	3.0	2.2	1208	chr3R	8894852	intron	pyd -	chr3R	8895456	intron	pyd -	chr3R	8896060	intron	pyd -	chr3R_9_8895001	chr3R_8895001	RAL-802_95b
1090	chr3R	9319563	9319603	chr3R	9320018	9320036	jockey	5	451	1.5	2.0	1.8	1.8	473	chr3R	9319563	intron	CG8861 -	chr3R	9319800	intron	CG8861 -	chr3R	9320036	intron	CG8861 -	chr3R_5_9315001	chr3R_9315001	RAL-802_95b
1093	chr3R	9361813	9361845	chr3R	9362074	9362106	pogo	5	261	3.0	7.0	5.0	0.8	293	chr3R	9361813	3` UTR	CG45050 +	chr3R	9361960	3` UTR	CG45050 +	chr3R	9362106	3` UTR	CG45050 +	chr3R_5_9360001	chr3R_9360001	RAL-802_95b
1100	chr3R	9699958	9700002	chr3R	9700066	9700097	1360	9	99	4.0	6.0	5.0	1.5	139	chr3R	9699958	intron	Unc-115a -	chr3R	9700028	intron	Unc-115a -	chr3R	9700097	intron	Unc-115a -	chr3R_9_9700001	chr3R_9700001	RAL-802_95b
1104	chr3R	10231769	10231813	chr3R	10237366	10237394	mdg3	6	5594	5.0	1.5	3.2	1.4	5625	chr3R	10231769	intron	CG42795 +	chr3R	10234582	intron	CG42795 +	chr3R	10237394	intron	CG42795 +	chr3R_6_10230001	chr3R_10230001	RAL-802_95b
1105	chr3R	10255363	10255385	chr3R	10260823	10260845	I-element	9	5457	9.0	2.5	5.8	1.3	5482	chr3R	10255363	3` UTR	Sirt6 -	chr3R	10258104	intron	Sirt6 -	chr3R	10260845	exon	Sirt6 -	chr3R_9_10255001	chr3R_10255001	RAL-802_95b
1110	chr3R	10804156	10804197	chr3R	10811708	10811749	17.6	4	7549	7.5	8.0	7.8	0.5	7593	chr3R	10804156	intergenic	CG14692 -	chr3R	10807952	intergenic	not near genes	chr3R	10811749	3` UTR	CG14693 -	chr3R_4_10805001	chr3R_10805001	RAL-802_95b
1120	chr3R	11379243	11379261	chr3R	11388392	11388427	roo	4	9166	3.0	0.5	1.8	1.4	9184	chr3R	11379243	intron	pros +	chr3R	11383835	intron	pros +	chr3R	11388427	intron	pros +	chr3R_4_11380001	chr3R_11380001	RAL-802_95b
1133	chr3R	11957846	11957851	chr3R	11958149	11958154	S-element	4	303	3.0	1.5	2.2	1.2	308	chr3R	11957846	intergenic	not near genes	chr3R	11958000	intergenic	not near genes	chr3R	11958154	intergenic	not near genes	chr3R_4_11955001	chr3R_11955001	RAL-802_95b
1134	chr3R	12022872	12022907	chr3R	12025069	12025099	pogo	9	2194	2.0	2.0	2.0	3.0	2227	chr3R	12022872	intergenic	not near genes	chr3R	12023986	intergenic	not near genes	chr3R	12025099	intergenic	not near genes	chr3R_9_12020001	chr3R_12020001	RAL-802_95b
1151	chr3R	12864556	12864570	chr3R	12865052	12865075	roo	6	511	2.0	2.0	2.0	2.0	519	chr3R	12864556	intergenic	not near genes	chr3R	12864816	intergenic	not near genes	chr3R	12865075	intergenic	not near genes	chr3R_6_12860001	chr3R_12860001	RAL-802_95b
1158	chr3R	13135820	13135850	chr3R	13138005	13138035	pogo	6	2187	3.5	1.5	2.5	1.7	2215	chr3R	13135820	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136928	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138035	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_6_13135001	chr3R_13135001	RAL-802_95b
1170	chr3R	14021620	14021657	chr3R	14023465	14023502	S-element	7	1842	4.5	3.0	3.8	1.5	1882	chr3R	14021620	intron	rdx -	chr3R	14022561	intron	rdx -	chr3R	14023502	intron	rdx -	chr3R_7_14020001	chr3R_14020001	RAL-802_95b
1178	chr3R	14180805	14180825	chr3R	14185575	14185580	F-element	4	4774	2.5	0.0	1.2	1.8	4775	chr3R	14180805	intron	Dop1R1 -	chr3R	14183192	intron	Dop1R1 -	chr3R	14185580	intron	Dop1R1 -	chr3R_4_14180001	chr3R_14180001	RAL-802_95b
1187	chr3R	15041406	15041452	chr3R	15045200	15045240	Doc	6	3792	3.0	2.5	2.8	1.6	3834	chr3R	15041406	intergenic	not near genes	chr3R	15043323	intergenic	not near genes	chr3R	15045240	intergenic	not near genes	chr3R_6_15040001	chr3R_15040001	RAL-802_95b
1188	chr3R	15079787	15079801	chr3R	15080048	15080052	pogo	4	258	7.5	1.0	4.2	0.8	265	chr3R	15079787	3` UTR	CG6966 -	chr3R	15079920	3` UTR	CG6966 -	chr3R	15080052	3` UTR	CG6966 -	chr3R_4_15075001	chr3R_15075001	RAL-802_95b
1189	chr3R	15102496	15102504	chr3R	15109772	15109780	412	4	7276	3.5	2.5	3.0	1.0	7284	chr3R	15102496	intron	CG42788 -	chr3R	15106138	intron	CG42788 -	chr3R	15109780	intron	CG42788 -	chr3R_4_15105001	chr3R_15105001	RAL-802_95b
1193	chr3R	15162531	15162575	chr3R	15167315	15167362	F-element	8	4786	3.0	1.0	2.0	2.7	4831	chr3R	15162531	intron	Gyc88E +	chr3R	15164946	intron	Gyc88E +	chr3R	15167362	intron	Gyc88E +	chr3R_8_15160001	chr3R_15160001	RAL-802_95b
1203	chr3R	15601155	15601180	chr3R	15608697	15608715	412	6	7539	3.5	3.0	3.2	1.4	7560	chr3R	15601155	intergenic	not near genes	chr3R	15604935	intergenic	not near genes	chr3R	15608715	intergenic	not near genes	chr3R_6_15600001	chr3R_15600001	RAL-802_95b
1204	chr3R	15618721	15618764	chr3R	15626211	15626237	blood	5	7481	1.5	1.0	1.2	2.3	7516	chr3R	15618721	intergenic	not near genes	chr3R	15622479	intergenic	not near genes	chr3R	15626237	intergenic	not near genes	chr3R_5_15620001	chr3R_15620001	RAL-802_95b
1212	chr3R	16189394	16189440	chr3R	16189817	16189848	invader4	11	419	2.5	5.0	3.8	2.3	454	chr3R	16189394	intron	sra +	chr3R	16189621	intron	sra +	chr3R	16189848	intron	sra +	chr3R_11_16185001	chr3R_16185001	RAL-802_95b
1226	chr3R	17294653	17294688	chr3R	17295101	17295135	BS	4	445	0.5	2.0	1.2	1.8	482	chr3R	17294653	intergenic	not near genes	chr3R	17294894	intergenic	not near genes	chr3R	17295135	intergenic	not near genes	chr3R_4_17290001	chr3R_17290001	RAL-802_95b
1227	chr3R	17346675	17346716	chr3R	17348258	17348299	F-element	10	1582	2.5	1.5	2.0	3.3	1624	chr3R	17346675	intron	beat-IIa -	chr3R	17347487	intron	beat-IIa -	chr3R	17348299	intron	beat-IIa -	chr3R_10_17345001	chr3R_17345001	RAL-802_95b
1236	chr3R	18061570	18061610	chr3R	18063158	18063198	F-element	11	1588	5.0	2.5	3.8	2.3	1628	chr3R	18061570	intergenic	not near genes	chr3R	18062384	intergenic	not near genes	chr3R	18063198	intergenic	not near genes	chr3R_11_18060001	chr3R_18060001	RAL-802_95b
1265	chr3R	20109530	20109567	chr3R	20114756	20114768	copia	5	5220	2.0	4.5	3.2	1.2	5238	chr3R	20109530	intergenic	not near genes	chr3R	20112149	intergenic	not near genes	chr3R	20114768	intergenic	CG10887 +	chr3R_5_20110001	chr3R_20110001	RAL-802_95b
1266	chr3R	20156681	20156714	chr3R	20165863	20165904	roo	7	9187	2.5	2.0	2.2	2.2	9223	chr3R	20156681	intergenic	not near genes	chr3R	20161292	intergenic	not near genes	chr3R	20165904	intergenic	not near genes	chr3R_7_20160001	chr3R_20160001	RAL-802_95b
1271	chr3R	20266500	20266549	chr3R	20272987	20273019	Burdock	8	6487	1.0	4.0	2.5	2.3	6519	chr3R	20266500	intron	cic +	chr3R	20269760	intron	cic +	chr3R	20273019	intron	cic +	chr3R_8_20265001	chr3R_20265001	RAL-802_95b
1274	chr3R	20330983	20331032	chr3R	20331489	20331498	roo	11	499	3.0	5.5	4.2	2.1	515	chr3R	20330983	intergenic	Sirt2 +	chr3R	20331240	intergenic	Sirt2 +	chr3R	20331498	intergenic	not near genes	chr3R_11_20330001	chr3R_20330001	RAL-802_95b
1276	chr3R	20512974	20512979	chr3R	20515706	20515711	opus	4	2732	9.0	0.5	4.8	0.7	2737	chr3R	20512974	intergenic	not near genes	chr3R	20514342	intergenic	not near genes	chr3R	20515711	intergenic	not near genes	chr3R_4_20510001	chr3R_20510001	RAL-802_95b
1277	chr3R	20512983	20513001	chr3R	20515705	20515733	opus	5	2730	4.5	0.5	2.5	1.4	2750	chr3R	20512983	intergenic	not near genes	chr3R	20514358	intergenic	not near genes	chr3R	20515733	intergenic	not near genes	chr3R_5_20510001	chr3R_20510001	RAL-802_95b
1303	chr3R	22234672	22234712	chr3R	22236011	22236017	pogo	8	1334	1.5	1.0	1.2	3.6	1345	chr3R	22234672	intron	SKIP +	chr3R	22235344	intron	SKIP +	chr3R	22236017	intron	SKIP +	chr3R_8_22235001	chr3R_22235001	RAL-802_95b
1312	chr3R	22881190	22881221	chr3R	22884916	22884946	Doc	4	3726	1.0	2.5	1.8	1.4	3756	chr3R	22881190	intergenic	not near genes	chr3R	22883068	intergenic	not near genes	chr3R	22884946	intergenic	not near genes	chr3R_4_22880001	chr3R_22880001	RAL-802_95b
1325	chr3R	23835402	23835428	chr3R	23844562	23844588	roo	6	9167	1.0	3.5	2.2	1.9	9186	chr3R	23835402	intron	CG34355 +	chr3R	23839995	intron	CG34355 +	chr3R	23844588	intron	CG34355 +	chr3R_6_23835001	chr3R_23835001	RAL-802_95b
1326	chr3R	23851074	23851079	chr3R	23858761	23858766	opus	4	7687	6.5	9.0	7.8	0.5	7692	chr3R	23851074	3` UTR	CG34355 +	chr3R	23854920	intergenic	not near genes	chr3R	23858766	intergenic	not near genes	chr3R_4_23850001	chr3R_23850001	RAL-802_95b
1339	chr3R	24493257	24493301	chr3R	24493506	24493549	BS	8	245	3.0	5.0	4.0	1.6	292	chr3R	24493257	intergenic	not near genes	chr3R	24493403	intergenic	not near genes	chr3R	24493549	intergenic	not near genes	chr3R_8_24490001	chr3R_24490001	RAL-802_95b
1357	chr3R	25725806	25725850	chr3R	25734986	25735030	roo	7	9178	5.0	5.5	5.2	1.1	9224	chr3R	25725806	intron	LpR2 -	chr3R	25730418	intron	LpR2 -	chr3R	25735030	intron	LpR2 -	chr3R_7_25730001	chr3R_25730001	RAL-802_95b
1369	chr3R	26558312	26558360	chr3R	26565645	26565659	Stalker4	5	7314	1.5	1.0	1.2	2.3	7347	chr3R	26558312	intron	scrib +	chr3R	26561986	intron	scrib +	chr3R	26565659	intron	scrib +	chr3R_5_26560001	chr3R_26560001	RAL-802_95b
1370	chr3R	26642720	26642752	chr3R	26643130	26643165	jockey	7	411	5.5	3.0	4.2	1.3	445	chr3R	26642720	intergenic	not near genes	chr3R	26642942	intergenic	not near genes	chr3R	26643165	intergenic	not near genes	chr3R_7_26640001	chr3R_26640001	RAL-802_95b
1373	chr3R	26810532	26810584	chr3R	26811037	26811089	roo	7	503	2.5	2.5	2.5	2.0	557	chr3R	26810532	intron	Tl +	chr3R	26810810	intron	Tl +	chr3R	26811089	intron	Tl +	chr3R_7_26810001	chr3R_26810001	RAL-802_95b
1376	chr3R	27007398	27007418	chr3R	27016547	27016552	roo	7	9148	3.5	2.0	2.8	1.8	9154	chr3R	27007398	intron	RYa-R +	chr3R	27011975	intron	RYa-R +	chr3R	27016552	intron	RYa-R +	chr3R_7_27010001	chr3R_27010001	RAL-802_95b
1379	chr3R	27140510	27140540	chr3R	27148124	27148148	412	8	7620	2.5	0.5	1.5	3.2	7638	chr3R	27140510	intron	CG6051 -	chr3R	27144329	intron	CG6051 -	chr3R	27148148	intron	CG6051 -	chr3R_8_27140001	chr3R_27140001	RAL-802_95b
1384	chr3R	27521143	27521183	chr3R	27530372	27530412	roo	15	9223	4.5	1.5	3.0	3.8	9269	chr3R	27521143	intron	CG12885 +	chr3R	27525778	intron	CG12885 +	chr3R	27530412	intron	CG12885 +	chr3R_15_27525001	chr3R_27525001	RAL-802_95b
1385	chr3R	27725553	27725589	chr3R	27731015	27731042	I-element	5	5454	4.0	1.5	2.8	1.3	5489	chr3R	27725553	intergenic	not near genes	chr3R	27728298	intergenic	not near genes	chr3R	27731042	intergenic	not near genes	chr3R_5_27725001	chr3R_27725001	RAL-802_95b
1387	chr3R	27875710	27875731	chr3R	27882770	27882806	297	6	7072	0.5	4.0	2.2	1.9	7096	chr3R	27875710	intron	CG34353 -	chr3R	27879258	intron	CG34353 -	chr3R	27882806	intron	CG34353 -	chr3R_6_27875001	chr3R_27875001	RAL-802_95b
1390	chr3R	28173652	28173694	chr3R	28181102	28181144	mdg1	6	7446	1.5	1.5	1.5	2.4	7492	chr3R	28173652	intron	CG34354 +	chr3R	28177398	intron	CG34354 +	chr3R	28181144	intron	CG34354 +	chr3R_6_28175001	chr3R_28175001	RAL-802_95b
1391	chr3R	28302091	28302106	chr3R	28302553	28302568	jockey	5	462	2.0	4.5	3.2	1.2	477	chr3R	28302091	intergenic	not near genes	chr3R	28302330	intergenic	not near genes	chr3R	28302568	intergenic	not near genes	chr3R_5_28300001	chr3R_28300001	RAL-802_95b
1398	chr3R	28758267	28758285	chr3R	28763904	28763922	roo	6	5637	3.0	0.0	1.5	2.4	5655	chr3R	28758267	intergenic	aqrs -	chr3R	28761094	intergenic	not near genes	chr3R	28763922	intergenic	not near genes	chr3R_6_28760001	chr3R_28760001	RAL-802_95b
1399	chr3R	28758302	28758319	chr3R	28771329	28771346	Stalker4	7	13027	1.5	0.0	0.8	3.9	13044	chr3R	28758302	intergenic	aqrs -	chr3R	28764824	intergenic	not near genes	chr3R	28771346	intergenic	not near genes	chr3R_7_28760001	chr3R_28760001	RAL-802_95b
1404	chr3R	29079362	29079399	chr3R	29080754	29080780	NOF	5	1386	5.0	5.0	5.0	0.8	1418	chr3R	29079362	intron	CG11873 +	chr3R	29080071	intron	CG11873 +	chr3R	29080780	intron	CG11873 +	chr3R_5_29080001	chr3R_29080001	RAL-802_95b
1409	chr3R	29319806	29319837	chr3R	29320145	29320176	jockey	5	339	3.5	2.5	3.0	1.2	370	chr3R	29319806	intergenic	Cnx99A -	chr3R	29319991	intergenic	Cnx99A -	chr3R	29320176	intergenic	not near genes	chr3R_5_29315001	chr3R_29315001	RAL-802_95b
1411	chr3R	29406620	29406638	chr3R	29407899	29407935	jockey	4	1297	1.0	2.0	1.5	1.6	1315	chr3R	29406620	intron	Ptp99A +	chr3R	29407278	intron	Ptp99A +	chr3R	29407935	intron	Ptp99A +	chr3R_4_29405001	chr3R_29405001	RAL-802_95b
1419	chr3R	29738255	29738287	chr3R	29739742	29739774	hobo	8	1487	6.5	1.5	4.0	1.6	1519	chr3R	29738255	intergenic	CG1969 +,CG7598 +	chr3R	29739014	intron	CG1969 +	chr3R	29739774	5` UTR	CG1969 +	chr3R_8_29735001	chr3R_29735001	RAL-802_95b
1420	chr3R	29760341	29760388	chr3R	29761562	29761609	pogo	17	1219	2.5	4.5	3.5	3.8	1268	chr3R	29760341	intergenic	not near genes	chr3R	29760975	intergenic	not near genes	chr3R	29761609	intergenic	not near genes	chr3R_17_29760001	chr3R_29760001	RAL-802_95b
1423	chr3R	29882003	29882016	chr3R	29891180	29891182	roo	5	9175	4.5	2.5	3.5	1.1	9179	chr3R	29882003	intron	CG31038 +	chr3R	29886592	intron	CG31038 +	chr3R	29891182	intron	CG31038 +	chr3R_5_29885001	chr3R_29885001	RAL-802_95b
1424	chr3R	29882018	29882051	chr3R	29891175	29891228	roo	7	9164	2.5	2.5	2.5	2.0	9210	chr3R	29882018	intron	CG31038 +	chr3R	29886623	intron	CG31038 +	chr3R	29891228	intron	CG31038 +	chr3R_7_29885001	chr3R_29885001	RAL-802_95b
1432	chr3R	30238742	30238797	chr3R	30239926	30239980	1360	16	1182	4.0	5.0	4.5	2.9	1238	chr3R	30238742	intergenic	not near genes	chr3R	30239361	intergenic	not near genes	chr3R	30239980	intergenic	not near genes	chr3R_16_30235001	chr3R_30235001	RAL-802_95b
1436	chr3R	30375539	30375567	chr3R	30383164	30383212	412	12	7636	4.0	0.5	2.2	3.8	7673	chr3R	30375539	intergenic	not near genes	chr3R	30379376	intergenic	not near genes	chr3R	30383212	intergenic	not near genes	chr3R_12_30375001	chr3R_30375001	RAL-802_95b
1437	chr3R	30396213	30396243	chr3R	30404489	30404529	roo	8	8281	2.5	4.5	3.5	1.8	8316	chr3R	30396213	intergenic	not near genes	chr3R	30400371	intergenic	not near genes	chr3R	30404529	5` UTR	CR45570 +	chr3R_8_30400001	chr3R_30400001	RAL-802_95b
1442	chr3R	30818795	30818841	chr3R	30820380	30820426	1360	13	1584	5.5	5.5	5.5	2.0	1631	chr3R	30818795	intron	cindr +	chr3R	30819610	intron	cindr +	chr3R	30820426	intron	cindr +	chr3R_13_30815001	chr3R_30815001	RAL-802_95b
1452	chr3R	31413091	31413113	chr3R	31418289	31418308	copia	4	5207	0.0	1.0	0.5	2.7	5217	chr3R	31413091	intron	Gprk2 +	chr3R	31415700	intron	Gprk2 +	chr3R	31418308	intron	Gprk2 +	chr3R_4_31415001	chr3R_31415001	RAL-802_95b
1458	chr3R	31997980	31998022	chr3R	32005470	32005508	blood	11	7487	1.5	3.5	2.5	3.1	7528	chr3R	31997980	intron	heph -	chr3R	32001744	intron	heph -	chr3R	32005508	intron	heph -	chr3R_11_32000001	chr3R_32000001	RAL-802_95b
1459	chr4	319974	320018	chr4	328170	328204	Stalker2	12	8193	2.0	3.5	2.8	3.2	8230	chr4	319974	3` UTR	CG32850 +	chr4	324089	intron	CG32850 +	chr4	328204	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_12_320001	chr4_320001	RAL-802_95b
1460	chr4	671586	671630	chr4	680189	680233	Tirant	10	8596	5.0	3.5	4.2	1.9	8647	chr4	671586	intron	CG11360 +	chr4	675910	intron	CG11360 +	chr4	680233	intron	CG11360 +	chr4_10_675001	chr4_675001	RAL-802_95b
1464	chrX	428401	428443	chrX	434606	434648	3S18	5	6205	3.5	3.5	3.5	1.1	6247	chrX	428401	intron	CG32816 -	chrX	431524	intron	CG32816 -	chrX	434648	intron	CG32816 -	chrX_5_430001	chrX_430001	RAL-802_95b
1468	chrX	812254	812288	chrX	817905	817923	297	8	5645	4.5	3.0	3.8	1.7	5669	chrX	812254	intron	CG43867 -	chrX	815088	intron	CG43867 -	chrX	817923	intron	CG43867 -	chrX_8_815001	chrX_815001	RAL-802_95b
1469	chrX	827594	827635	chrX	835391	835393	roo	8	7791	1.5	2.0	1.8	2.9	7799	chrX	827594	intron	CG43867 -	chrX	831494	intron	CG43867 -	chrX	835393	intron	CG43867 -	chrX_8_830001	chrX_830001	RAL-802_95b
1471	chrX	1357759	1357798	chrX	1367949	1367988	Doc	8	10188	2.0	1.0	1.5	3.2	10229	chrX	1357759	intergenic	png -	chrX	1362874	intergenic	not near genes	chrX	1367988	intergenic	not near genes	chrX_8_1360001	chrX_1360001	RAL-802_95b
1474	chrX	2664377	2664413	chrX	2665536	2665579	1360	5	1154	4.5	5.5	5.0	0.8	1202	chrX	2664377	intron	sgg +	chrX	2664978	intron	sgg +	chrX	2665579	intron	sgg +	chrX_5_2660001	chrX_2660001	RAL-802_95b
1476	chrX	2844896	2844930	chrX	2852326	2852360	mdg1	6	7428	1.5	3.5	2.5	1.7	7464	chrX	2844896	intron	kirre +	chrX	2848628	intron	kirre +	chrX	2852360	intron	kirre +	chrX_6_2845001	chrX_2845001	RAL-802_95b
1480	chrX	3726748	3726782	chrX	3730165	3730196	NOF	4	3415	1.5	0.0	0.8	2.2	3448	chrX	3726748	intron	tlk +	chrX	3728472	intron	tlk +	chrX	3730196	intron	tlk +	chrX_4_3725001	chrX_3725001	RAL-802_95b
1481	chrX	3752386	3752407	chrX	3764755	3764755	17.6	6	12365	6.0	14.5	10.2	0.5	12369	chrX	3752386	intron	tlk +	chrX	3758570	intron	tlk +	chrX	3764755	intron	tlk +	chrX_6_3755001	chrX_3755001	RAL-802_95b
1482	chrX	3842334	3842340	chrX	3842572	3842578	pogo	4	238	3.0	1.5	2.2	1.2	244	chrX	3842334	intron	ec +	chrX	3842456	intron	ec +	chrX	3842578	intron	ec +	chrX_4_3840001	chrX_3840001	RAL-802_95b
1484	chrX	3986847	3986888	chrX	3994494	3994526	412	4	7646	1.5	3.0	2.2	1.2	7679	chrX	3986847	intergenic	not near genes	chrX	3990686	intergenic	not near genes	chrX	3994526	intergenic	not near genes	chrX_4_3990001	chrX_3990001	RAL-802_95b
1486	chrX	4763242	4763259	chrX	4763750	4763767	Stalker4	4	505	1.5	2.5	2.0	1.3	525	chrX	4763242	intergenic	not near genes	chrX	4763504	intergenic	not near genes	chrX	4763767	intergenic	not near genes	chrX_4_4760001	chrX_4760001	RAL-802_95b
1487	chrX	4792367	4792407	chrX	4792815	4792818	jockey	5	443	1.0	2.0	1.5	2.0	451	chrX	4792367	intergenic	not near genes	chrX	4792592	intergenic	not near genes	chrX	4792818	intergenic	not near genes	chrX_5_4790001	chrX_4790001	RAL-802_95b
1489	chrX	4990021	4990070	chrX	4997255	4997262	roo	12	7223	1.0	1.0	1.0	6.0	7241	chrX	4990021	intron	CR44833 -	chrX	4993642	intron	CR44833 -	chrX	4997262	intron	CR44833 -	chrX_12_4990001	chrX_4990001	RAL-802_95b
1490	chrX	5096267	5096305	chrX	5103852	5103870	springer	5	7581	0.5	2.5	1.5	2.0	7603	chrX	5096267	intron,intron	CG15465 +,rg +	chrX	5100068	intron,intron	CG15465 +,rg +	chrX	5103870	intron,intron	CG15465 +,rg +	chrX_5_5100001	chrX_5100001	RAL-802_95b
1494	chrX	5524830	5524865	chrX	5528702	5528702	412	5	3870	4.0	1.0	2.5	1.4	3872	chrX	5524830	intergenic	snoRNA:Psi28S-3342 -	chrX	5526766	intergenic	not near genes	chrX	5528702	intergenic	Vsx2 -	chrX_5_5525001	chrX_5525001	RAL-802_95b
1495	chrX	5883809	5883841	chrX	5884070	5884101	pogo	8	256	1.5	2.5	2.0	2.7	292	chrX	5883809	intron	CR45668 -	chrX	5883955	intron	CR45668 -	chrX	5884101	intron	CR45668 -	chrX_8_5880001	chrX_5880001	RAL-802_95b
1496	chrX	5884163	5884186	chrX	5884421	5884445	pogo	7	259	2.0	2.5	2.2	2.2	282	chrX	5884163	intron	CR45668 -	chrX	5884304	intron	CR45668 -	chrX	5884445	intron	CR45668 -	chrX_7_5880001	chrX_5880001	RAL-802_95b
1497	chrX	6171577	6171603	chrX	6179030	6179056	Quasimodo	5	7452	3.5	1.5	2.5	1.4	7479	chrX	6171577	intron	Ca-alpha1T -	chrX	6175316	intron	Ca-alpha1T -	chrX	6179056	intron	Ca-alpha1T -	chrX_5_6175001	chrX_6175001	RAL-802_95b
1503	chrX	7125248	7125267	chrX	7134427	7134446	roo	5	9176	1.0	4.5	2.8	1.3	9198	chrX	7125248	intergenic	not near genes	chrX	7129847	intergenic	not near genes	chrX	7134446	intergenic	not near genes	chrX_5_7125001	chrX_7125001	RAL-802_95b
1504	chrX	7702902	7702922	chrX	7703361	7703364	jockey	5	454	7.5	9.0	8.2	0.5	462	chrX	7702902	intron	CHES-1-like -	chrX	7703133	intron	CHES-1-like -	chrX	7703364	intron	CHES-1-like -	chrX_5_7700001	chrX_7700001	RAL-802_95b
1515	chrX	8922320	8922340	chrX	8922761	8922794	jockey	4	445	1.0	1.0	1.0	2.0	474	chrX	8922320	intron	rdgA +	chrX	8922557	intron	rdgA +	chrX	8922794	intron	rdgA +	chrX_4_8920001	chrX_8920001	RAL-802_95b
1516	chrX	8948737	8948779	chrX	8956267	8956309	roo	5	7526	1.5	2.0	1.8	1.8	7572	chrX	8948737	intron	rdgA +	chrX	8952523	intron	rdgA +	chrX	8956309	intron	rdgA +	chrX_5_8950001	chrX_8950001	RAL-802_95b
1520	chrX	9508119	9508157	chrX	9509657	9509695	jockey	6	1536	3.0	0.5	1.8	2.1	1576	chrX	9508119	intron	CG32700 -	chrX	9508907	intron	CG32700 -	chrX	9509695	intron	CG32700 -	chrX_6_9505001	chrX_9505001	RAL-802_95b
1522	chrX	10138201	10138240	chrX	10145719	10145753	412	10	7520	2.5	3.5	3.0	2.5	7552	chrX	10138201	intron,intron	RhoU +,CR44894 -	chrX	10141977	intron,intron	RhoU +,CR44894 -	chrX	10145753	intron,intron	RhoU +,CR44894 -	chrX_10_10140001	chrX_10140001	RAL-802_95b
1523	chrX	10267300	10267335	chrX	10276470	10276495	roo	12	9168	0.0	4.5	2.2	3.8	9195	chrX	10267300	3` UTR	alpha-Man-I -	chrX	10271898	intron	alpha-Man-I -	chrX	10276495	3` UTR	alpha-Man-I -	chrX_12_10270001	chrX_10270001	RAL-802_95b
1526	chrX	10348815	10348822	chrX	10356379	10356407	springer	4	7575	3.0	3.5	3.2	1.0	7592	chrX	10348815	intergenic	snoRNA:U3:9B +	chrX	10352611	intergenic	not near genes	chrX	10356407	intergenic	l(1)G0289 -	chrX_4_10350001	chrX_10350001	RAL-802_95b
1529	chrX	11095980	11096008	chrX	11103102	11103130	HMS-Beagle	7	7121	4.0	3.0	3.5	1.6	7150	chrX	11095980	intergenic	not near genes	chrX	11099555	intergenic	not near genes	chrX	11103130	intron	CG42249 +	chrX_7_11095001	chrX_11095001	RAL-802_95b
1533	chrX	11633397	11633442	chrX	11640471	11640491	297	8	7070	2.5	3.5	3.0	2.0	7094	chrX	11633397	intron	Ptp10D +	chrX	11636944	intron	Ptp10D +	chrX	11640491	intron	Ptp10D +	chrX_8_11635001	chrX_11635001	RAL-802_95b
1535	chrX	11645107	11645140	chrX	11648296	11648314	NOF	4	3186	0.0	3.0	1.5	1.6	3207	chrX	11645107	intron	Ptp10D +	chrX	11646710	intron	Ptp10D +	chrX	11648314	intron	Ptp10D +	chrX_4_11645001	chrX_11645001	RAL-802_95b
1544	chrX	12930580	12930605	chrX	12937716	12937736	HMS-Beagle	6	7135	3.5	3.5	3.5	1.3	7156	chrX	12930580	intron	fne +	chrX	12934158	intron	fne +	chrX	12937736	intron	fne +	chrX_6_12930001	chrX_12930001	RAL-802_95b
1548	chrX	13401469	13401514	chrX	13401836	13401886	jockey	13	370	2.5	3.0	2.8	3.4	417	chrX	13401469	intergenic	CG1673 +,CG12725 -	chrX	13401678	intergenic	CG12725 -,CG1673 +	chrX	13401886	3` UTR	CG12725 -	chrX_13_13400001	chrX_13400001	RAL-802_95b
1549	chrX	13429458	13429491	chrX	13430612	13430649	jockey	5	1164	3.5	2.5	3.0	1.2	1191	chrX	13429458	intergenic	not near genes	chrX	13430054	intergenic	not near genes	chrX	13430649	intergenic	not near genes	chrX_5_13430001	chrX_13430001	RAL-802_95b
1550	chrX	13463636	13463667	chrX	13469223	13469249	mdg3	5	5589	3.5	4.0	3.8	1.0	5613	chrX	13463636	intron	Neto +	chrX	13466442	intron	Neto +	chrX	13469249	intron	Neto +	chrX_5_13465001	chrX_13465001	RAL-802_95b
1560	chrX	14416294	14416332	chrX	14421081	14421109	F-element	8	4784	2.5	3.0	2.8	2.1	4815	chrX	14416294	intron	dpr8 +	chrX	14418702	intron	dpr8 +	chrX	14421109	intron	dpr8 +	chrX_8_14415001	chrX_14415001	RAL-802_95b
1562	chrX	14778027	14778051	chrX	14782844	14782868	Doc	9	4817	1.5	6.5	4.0	1.8	4841	chrX	14778027	intergenic	CG5347 +	chrX	14780448	intergenic	not near genes	chrX	14782868	intergenic	Ag5r2 -	chrX_9_14780001	chrX_14780001	RAL-802_95b
1564	chrX	14936844	14936890	chrX	14946118	14946126	roo	16	9272	4.5	1.5	3.0	4.0	9282	chrX	14936844	intron	pdgy -	chrX	14941485	intron	pdgy -	chrX	14946126	intron	pdgy -	chrX_16_14940001	chrX_14940001	RAL-802_95b
1569	chrX	15421908	15421940	chrX	15423439	15423471	pogo	5	1529	1.0	6.0	3.5	1.1	1563	chrX	15421908	intron	Cngl -	chrX	15422690	intron	Cngl -	chrX	15423471	intron	Cngl -	chrX_5_15420001	chrX_15420001	RAL-802_95b
1577	chrX	16222781	16222790	chrX	16231151	16231160	roo	4	8370	3.5	7.0	5.2	0.6	8379	chrX	16222781	intergenic	not near genes	chrX	16226970	intergenic	not near genes	chrX	16231160	intergenic	not near genes	chrX_4_16225001	chrX_16225001	RAL-802_95b
1579	chrX	16340652	16340698	chrX	16349827	16349839	roo	5	9169	0.0	5.0	2.5	1.4	9187	chrX	16340652	intergenic	Dsp1 +	chrX	16345246	intergenic	not near genes	chrX	16349839	intergenic	sl +	chrX_5_16345001	chrX_16345001	RAL-802_95b
1581	chrX	16492648	16492659	chrX	16498229	16498256	mdg3	4	5593	2.0	3.5	2.8	1.1	5608	chrX	16492648	intron	para -	chrX	16495452	intron	para -	chrX	16498256	intron	para -	chrX_4_16495001	chrX_16495001	RAL-802_95b
1600	chrX	18194049	18194067	chrX	18194604	18194614	BS	4	552	6.0	0.5	3.2	1.0	565	chrX	18194049	intron	Frq2 +	chrX	18194332	intron	Frq2 +	chrX	18194614	intron	Frq2 +	chrX_4_18190001	chrX_18190001	RAL-802_95b
1601	chrX	18194069	18194085	chrX	18194602	18194639	BS	4	543	5.0	0.5	2.8	1.1	570	chrX	18194069	intron	Frq2 +	chrX	18194354	intron	Frq2 +	chrX	18194639	intron	Frq2 +	chrX_4_18190001	chrX_18190001	RAL-802_95b
1603	chrX	18429478	18429516	chrX	18434809	18434831	Transpac	5	5327	3.5	4.0	3.8	1.0	5353	chrX	18429478	intergenic	not near genes	chrX	18432154	intergenic	not near genes	chrX	18434831	intergenic	not near genes	chrX_5_18430001	chrX_18430001	RAL-802_95b
1612	chrX	19060421	19060436	chrX	19065225	19065230	Doc	4	4802	1.5	1.0	1.2	1.8	4809	chrX	19060421	intron	CG14190 +	chrX	19062826	intron	CG14190 +	chrX	19065230	intron	CG14190 +	chrX_4_19060001	chrX_19060001	RAL-802_95b
1619	chrX	19356968	19357019	chrX	19358429	19358498	NOF	9	1463	2.0	0.5	1.2	4.1	1530	chrX	19356968	intron	kek5 +	chrX	19357733	intron	kek5 +	chrX	19358498	intron	kek5 +	chrX_9_19355001	chrX_19355001	RAL-802_95b
1620	chrX	19472122	19472154	chrX	19472691	19472728	jockey	4	564	1.0	3.0	2.0	1.3	606	chrX	19472122	intergenic	kek5 +	chrX	19472425	intergenic	not near genes	chrX	19472728	intergenic	not near genes	chrX_4_19470001	chrX_19470001	RAL-802_95b
1633	chrX	20940710	20940745	chrX	20942199	20942224	hobo	6	1487	2.5	2.0	2.2	1.9	1514	chrX	20940710	intergenic	not near genes	chrX	20941467	intergenic	not near genes	chrX	20942224	intergenic	not near genes	chrX_6_20940001	chrX_20940001	RAL-802_95b
1636	chrX	21061849	21061897	chrX	21062348	21062392	roo	4	498	3.0	3.5	3.2	1.0	543	chrX	21061849	intron	bves +	chrX	21062120	intron	bves +	chrX	21062392	intron,3` UTR	bves +,CG32512 -	chrX_4_21060001	chrX_21060001	RAL-802_95b
1637	chrX	21086139	21086161	chrX	21087178	21087210	jockey	4	1046	2.5	7.5	5.0	0.7	1071	chrX	21086139	intergenic	not near genes	chrX	21086674	intergenic	not near genes	chrX	21087210	intergenic	not near genes	chrX_4_21085001	chrX_21085001	RAL-802_95b
1646	chrX	21458686	21458723	chrX	21464142	21464163	Ivk	5	5447	3.5	3.5	3.5	1.1	5477	chrX	21458686	intergenic	not near genes	chrX	21461424	intergenic	not near genes	chrX	21464163	intergenic	not near genes	chrX_5_21460001	chrX_21460001	RAL-802_95b
1652	chrX	22522634	22522656	chrX	22525454	22525481	NOF	7	2834	2.5	4.0	3.2	1.7	2847	chrX	22522634	intron	CG17600 +	chrX	22524058	intron	CG17600 +	chrX	22525481	intron	CG17600 +	chrX_7_22520001	chrX_22520001	RAL-802_95b
1654	chrX	22620494	22620508	chrX	22626768	22626792	297	4	6280	4.0	1.5	2.8	1.1	6298	chrX	22620494	intron	Cda4 -	chrX	22623643	intron	Cda4 -	chrX	22626792	intron	Cda4 -	chrX_4_22620001	chrX_22620001	RAL-802_95b
1659	chrX	22811980	22812003	chrX	22816773	22816791	F-element	6	4792	5.5	2.5	4.0	1.2	4811	chrX	22811980	intergenic	CG12446 -	chrX	22814386	intergenic	not near genes	chrX	22816791	intergenic	not near genes	chrX_6_22810001	chrX_22810001	RAL-802_95b
1661	chrX	22987102	22987126	chrX	22989781	22989805	Burdock	4	2675	1.0	2.5	1.8	1.4	2703	chrX	22987102	intron,intron	stnA -,stnB -	chrX	22988454	intron,intron	stnA -,stnB -	chrX	22989805	intron,intron	stnA -,stnB -	chrX_4_22985001	chrX_22985001	RAL-802_95b
1662	chrX	22996297	22996339	chrX	23003545	23003553	roo	4	7241	1.0	2.5	1.8	1.4	7256	chrX	22996297	intron,intron	stnA -,stnB -	chrX	22999925	intron,intron	stnA -,stnB -	chrX	23003553	intron,intron	stnA -,stnB -	chrX_4_22995001	chrX_22995001	RAL-802_95b