SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 42812 42836 chr2L 42896 42928 4 88 11.5 12.0 11.8 0.3 116 chr2L 42812 intron Cda5 - chr2L 42870 intron Cda5 - chr2L 42928 intron Cda5 - chr2L_4_40001 chr2L_40001 RAL-802_95b 2 chr2L 47455 47485 chr2L 52568 52599 jockey 6 5117 2.0 6.0 4.0 1.2 5144 chr2L 47455 intron Cda5 - chr2L 50027 intron Cda5 - chr2L 52599 intron Cda5 - chr2L_6_50001 chr2L_50001 RAL-802_95b 3 chr2L 164875 164911 chr2L 165009 165040 6 132 15.0 15.5 15.2 0.4 165 chr2L 164875 intron spen + chr2L 164958 intron spen + chr2L 165040 intron spen + chr2L_6_160001 chr2L_160001 RAL-802_95b 4 chr2L 347877 347911 chr2L 355386 355431 blood 9 7514 3.5 1.5 2.5 2.6 7554 chr2L 347877 3` UTR Plc21C + chr2L 351654 intron Plc21C + chr2L 355431 3` UTR Plc21C + chr2L_9_350001 chr2L_350001 RAL-802_95b 5 chr2L 407927 407970 chr2L 408028 408064 12 100 6.5 6.5 6.5 1.6 137 chr2L 407927 3` UTR RpI135 + chr2L 407996 intergenic RpI135 +,AP-2alpha - chr2L 408064 3` UTR AP-2alpha - chr2L_12_405001 chr2L_405001 RAL-802_95b 6 chr2L 458870 458919 chr2L 458966 459016 8 96 5.0 4.5 4.8 1.4 146 chr2L 458870 intergenic CG4297 -,CG4133 + chr2L 458943 3` UTR CG4297 - chr2L 459016 3` UTR CG4297 - chr2L_8_455001 chr2L_455001 RAL-802_95b 7 chr2L 686923 686942 chr2L 695983 696002 roo 4 9058 1.0 2.5 1.8 1.4 9079 chr2L 686923 intron ds - chr2L 691462 intron ds - chr2L 696002 intron ds - chr2L_4_690001 chr2L_690001 RAL-802_95b 8 chr2L 931633 931651 chr2L 931725 931750 4 94 4.0 7.0 5.5 0.6 117 chr2L 931633 intron CG4341 + chr2L 931692 intron CG4341 + chr2L 931750 intron CG4341 + chr2L_4_930001 chr2L_930001 RAL-802_95b 9 chr2L 996709 996746 chr2L 1005817 1005844 roo 7 9113 0.0 3.5 1.8 2.5 9135 chr2L 996709 intergenic not near genes chr2L 1001276 intergenic not near genes chr2L 1005844 intergenic not near genes chr2L_7_1000001 chr2L_1000001 RAL-802_95b 10 chr2L 1035546 1035558 chr2L 1035643 1035655 4 97 3.5 1.5 2.5 1.1 109 chr2L 1035546 intron IA-2 - chr2L 1035600 intron IA-2 - chr2L 1035655 intron IA-2 - chr2L_4_1035001 chr2L_1035001 RAL-802_95b 11 chr2L 1126651 1126679 chr2L 1126747 1126775 5 92 5.5 4.5 5.0 0.8 124 chr2L 1126651 intron Pino - chr2L 1126713 intron Pino - chr2L 1126775 intron Pino - chr2L_5_1125001 chr2L_1125001 RAL-802_95b 12 chr2L 1164240 1164261 chr2L 1164346 1164367 6 103 6.5 6.0 6.2 0.8 127 chr2L 1164240 intergenic IntS14 +,CG5080 - chr2L 1164304 intergenic IntS14 +,CG5080 - chr2L 1164367 intergenic IntS14 +,CG5080 - chr2L_6_1160001 chr2L_1160001 RAL-802_95b 13 chr2L 1220132 1220160 chr2L 1227617 1227631 blood 5 7481 4.0 5.5 4.8 0.9 7499 chr2L 1220132 intron CG42329 + chr2L 1223882 intron CG42329 + chr2L 1227631 intron CG42329 + chr2L_5_1220001 chr2L_1220001 RAL-802_95b 14 chr2L 1349424 1349454 chr2L 1349527 1349557 5 100 3.5 3.0 3.2 1.2 133 chr2L 1349424 intergenic not near genes chr2L 1349490 intergenic not near genes chr2L 1349557 intergenic not near genes chr2L_5_1345001 chr2L_1345001 RAL-802_95b 15 chr2L 1508023 1508069 chr2L 1508127 1508172 4 104 5.5 6.5 6.0 0.6 149 chr2L 1508023 intergenic not near genes chr2L 1508098 intergenic not near genes chr2L 1508172 intergenic not near genes chr2L_4_1505001 chr2L_1505001 RAL-802_95b 16 chr2L 1570685 1570709 chr2L 1573562 1573601 F-element 5 2889 2.0 1.0 1.5 2.0 2916 chr2L 1570685 intron haf + chr2L 1572143 intron haf + chr2L 1573601 intron haf + chr2L_5_1570001 chr2L_1570001 RAL-802_95b 17 chr2L 1590942 1590947 chr2L 1591038 1591043 4 96 6.5 3.5 5.0 0.7 101 chr2L 1590942 intron haf + chr2L 1590992 intron haf + chr2L 1591043 intron haf + chr2L_4_1590001 chr2L_1590001 RAL-802_95b 18 chr2L 1590950 1590975 chr2L 1591031 1591050 4 84 4.5 3.5 4.0 0.8 100 chr2L 1590950 intron haf + chr2L 1591000 intron haf + chr2L 1591050 intron haf + chr2L_4_1590001 chr2L_1590001 RAL-802_95b 19 chr2L 1678953 1678986 chr2L 1686456 1686464 blood 4 7496 0.5 4.5 2.5 1.1 7511 chr2L 1678953 intron chinmo + chr2L 1682708 intron chinmo + chr2L 1686464 intron chinmo + chr2L_4_1680001 chr2L_1680001 RAL-802_95b 20 chr2L 1711341 1711379 chr2L 1711686 1711703 mdg3 4 335 0.0 1.0 0.5 2.7 362 chr2L 1711341 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711522 3` UTR frtz - chr2L 1711703 3` UTR frtz - chr2L_4_1710001 chr2L_1710001 RAL-802_95b 21 chr2L 1724805 1724824 chr2L 1724907 1724926 4 102 19.5 19.0 19.2 0.2 121 chr2L 1724805 3` UTR Eno - chr2L 1724866 3` UTR Eno - chr2L 1724926 3` UTR Eno - chr2L_4_1720001 chr2L_1720001 RAL-802_95b 22 chr2L 1744793 1744816 chr2L 1744891 1744909 4 97 1.5 2.0 1.8 1.4 116 chr2L 1744793 intron CG17646 + chr2L 1744851 intron CG17646 + chr2L 1744909 intron CG17646 + chr2L_4_1740001 chr2L_1740001 RAL-802_95b 23 chr2L 1744817 1744828 chr2L 1744890 1744906 4 82 2.0 2.0 2.0 1.3 89 chr2L 1744817 intron CG17646 + chr2L 1744862 intron CG17646 + chr2L 1744906 intron CG17646 + chr2L_4_1740001 chr2L_1740001 RAL-802_95b 24 chr2L 1795464 1795645 chr2L 1795553 1795761 4 104 10.0 8.5 9.2 0.4 297 chr2L 1795464 intergenic not near genes chr2L 1795612 intergenic not near genes chr2L 1795761 intergenic not near genes chr2L_4_1795001 chr2L_1795001 RAL-802_95b 25 chr2L 1925472 1925500 chr2L 1925569 1925597 4 93 2.5 2.0 2.2 1.2 125 chr2L 1925472 intron CG7337 + chr2L 1925534 intron CG7337 + chr2L 1925597 intron CG7337 + chr2L_4_1925001 chr2L_1925001 RAL-802_95b 26 chr2L 1946729 1946740 chr2L 1946825 1946826 4 93 4.0 2.5 3.2 1.0 97 chr2L 1946729 intergenic CG33673 - chr2L 1946778 intergenic CG33673 - chr2L 1946826 intergenic CG33673 - chr2L_4_1945001 chr2L_1945001 RAL-802_95b 27 chr2L 1948612 1948626 chr2L 1948732 1948753 4 123 0.0 0.5 0.2 3.3 141 chr2L 1948612 intergenic not near genes chr2L 1948682 intergenic not near genes chr2L 1948753 intergenic not near genes chr2L_4_1945001 chr2L_1945001 RAL-802_95b 28 chr2L 2075513 2075538 chr2L 2075601 2075604 5 94 3.5 4.0 3.8 1.0 91 chr2L 2075513 intron dpr3 - chr2L 2075558 intron dpr3 - chr2L 2075604 intron dpr3 - chr2L_5_2075001 chr2L_2075001 RAL-802_95b 29 chr2L 2100386 2100403 chr2L 2109525 2109543 roo 4 9151 4.5 1.0 2.8 1.1 9157 chr2L 2100386 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109543 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-802_95b 30 chr2L 2260786 2260832 chr2L 2260892 2260913 6 101 3.5 2.0 2.8 1.6 127 chr2L 2260786 intergenic not near genes chr2L 2260850 intergenic not near genes chr2L 2260913 intergenic not near genes chr2L_6_2260001 chr2L_2260001 RAL-802_95b 31 chr2L 2262287 2262314 chr2L 2262384 2262406 4 96 3.5 1.0 2.2 1.2 119 chr2L 2262287 intergenic not near genes chr2L 2262346 intergenic not near genes chr2L 2262406 intergenic not near genes chr2L_4_2260001 chr2L_2260001 RAL-802_95b 32 chr2L 2410178 2410186 chr2L 2410285 2410293 4 106 9.0 5.0 7.0 0.5 115 chr2L 2410178 3` UTR VGlut + chr2L 2410236 3` UTR VGlut + chr2L 2410293 3` UTR VGlut + chr2L_4_2410001 chr2L_2410001 RAL-802_95b 33 chr2L 2522235 2522273 chr2L 2522355 2522362 8 111 8.5 4.5 6.5 1.1 127 chr2L 2522235 intergenic not near genes chr2L 2522298 intergenic not near genes chr2L 2522362 intergenic not near genes chr2L_8_2520001 chr2L_2520001 RAL-802_95b 34 chr2L 2715683 2715696 chr2L 2715779 2715792 4 96 2.0 3.0 2.5 1.1 109 chr2L 2715683 intron CG31690 + chr2L 2715738 intron CG31690 + chr2L 2715792 intron CG31690 + chr2L_4_2715001 chr2L_2715001 RAL-802_95b 35 chr2L 2724388 2724434 chr2L 2724484 2724520 5 92 4.5 8.0 6.2 0.7 132 chr2L 2724388 intergenic not near genes chr2L 2724454 intergenic not near genes chr2L 2724520 intergenic not near genes chr2L_5_2720001 chr2L_2720001 RAL-802_95b 36 chr2L 2830421 2830509 chr2L 2830571 2830619 4 118 1.0 0.5 0.8 2.2 198 chr2L 2830421 intergenic Duox - chr2L 2830520 intergenic Duox - chr2L 2830619 intergenic Duox - chr2L_4_2830001 chr2L_2830001 RAL-802_95b 37 chr2L 2937405 2937434 chr2L 2937502 2937524 4 95 7.0 3.0 5.0 0.7 119 chr2L 2937405 intron lilli + chr2L 2937464 intron lilli + chr2L 2937524 intron lilli + chr2L_4_2935001 chr2L_2935001 RAL-802_95b 38 chr2L 3073019 3073045 chr2L 3078237 3078267 copia 6 5221 3.5 1.5 2.5 1.7 5248 chr2L 3073019 intron toc - chr2L 3075643 intron toc - chr2L 3078267 intron toc - chr2L_6_3075001 chr2L_3075001 RAL-802_95b 39 chr2L 3108854 3108877 chr2L 3108951 3108971 5 96 4.5 4.5 4.5 0.9 117 chr2L 3108854 exon toc - chr2L 3108912 intron toc - chr2L 3108971 intron toc - chr2L_5_3105001 chr2L_3105001 RAL-802_95b 40 chr2L 3134278 3134293 chr2L 3134373 3134389 4 96 2.5 6.0 4.2 0.8 111 chr2L 3134278 intron toc - chr2L 3134334 intron toc - chr2L 3134389 intron toc - chr2L_4_3130001 chr2L_3130001 RAL-802_95b 41 chr2L 3192209 3192223 chr2L 3192340 3192347 4 128 4.5 4.5 4.5 0.7 138 chr2L 3192209 exon CG34393 - chr2L 3192278 intron CG34393 - chr2L 3192347 intron CG34393 - chr2L_4_3190001 chr2L_3190001 RAL-802_95b 42 chr2L 3201099 3201144 chr2L 3201201 3201225 8 97 8.0 9.5 8.8 0.8 126 chr2L 3201099 intergenic not near genes chr2L 3201162 intergenic not near genes chr2L 3201225 intergenic not near genes chr2L_8_3200001 chr2L_3200001 RAL-802_95b 43 chr2L 3202728 3202767 chr2L 3210172 3210216 mdg1 4 7448 2.0 0.0 1.0 2.0 7488 chr2L 3202728 intergenic not near genes chr2L 3206472 intergenic not near genes chr2L 3210216 intergenic CR45336 + chr2L_4_3205001 chr2L_3205001 RAL-802_95b 44 chr2L 3233633 3233653 chr2L 3233791 3233824 4 165 11.0 7.5 9.2 0.4 191 chr2L 3233633 intergenic not near genes chr2L 3233728 intergenic not near genes chr2L 3233824 intergenic not near genes chr2L_4_3230001 chr2L_3230001 RAL-802_95b 45 chr2L 3251488 3251501 chr2L 3259073 3259081 springer 4 7584 3.5 1.5 2.5 1.1 7593 chr2L 3251488 intergenic not near genes chr2L 3255284 intergenic not near genes chr2L 3259081 intergenic not near genes chr2L_4_3255001 chr2L_3255001 RAL-802_95b 46 chr2L 3251503 3251520 chr2L 3259061 3259105 springer 6 7580 2.0 1.5 1.8 2.1 7602 chr2L 3251503 intergenic not near genes chr2L 3255304 intergenic not near genes chr2L 3259105 intergenic not near genes chr2L_6_3255001 chr2L_3255001 RAL-802_95b 47 chr2L 3314541 3314723 chr2L 3314636 3314820 10 96 6.5 12.5 9.5 1.0 279 chr2L 3314541 intron CG3277 + chr2L 3314680 intron CG3277 + chr2L 3314820 intron CG3277 + chr2L_10_3310001 chr2L_3310001 RAL-802_95b 48 chr2L 3388584 3388630 chr2L 3388845 3388891 pogo 10 261 3.0 1.0 2.0 3.3 307 chr2L 3388584 intergenic CG42460 - chr2L 3388738 intergenic CG42460 - chr2L 3388891 intergenic CG42460 -,CR44791 + chr2L_10_3385001 chr2L_3385001 RAL-802_95b 49 chr2L 3497837 3497869 chr2L 3497925 3497967 7 92 2.5 5.0 3.8 1.5 130 chr2L 3497837 intron tim - chr2L 3497902 intron tim - chr2L 3497967 intron tim - chr2L_7_3495001 chr2L_3495001 RAL-802_95b 50 chr2L 3557030 3557047 chr2L 3557102 3557133 5 80 3.5 4.0 3.8 1.0 103 chr2L 3557030 intergenic not near genes chr2L 3557082 intergenic not near genes chr2L 3557133 intergenic not near genes chr2L_5_3555001 chr2L_3555001 RAL-802_95b 51 chr2L 3582877 3582903 chr2L 3582974 3582980 5 92 0.0 2.5 1.2 2.3 103 chr2L 3582877 intergenic not near genes chr2L 3582928 intergenic not near genes chr2L 3582980 intergenic not near genes chr2L_5_3580001 chr2L_3580001 RAL-802_95b 52 chr2L 3649785 3649815 chr2L 3654988 3655038 copia 10 5221 2.5 2.5 2.5 2.9 5253 chr2L 3649785 intron for - chr2L 3652412 intron for - chr2L 3655038 intron for - chr2L_10_3650001 chr2L_3650001 RAL-802_95b 53 chr2L 3663295 3663342 chr2L 3663393 3663441 9 94 2.0 3.0 2.5 2.6 146 chr2L 3663295 5` UTR CG34340 + chr2L 3663368 intron CG34340 + chr2L 3663441 intron CG34340 + chr2L_9_3660001 chr2L_3660001 RAL-802_95b 54 chr2L 3831831 3831858 chr2L 3831932 3831944 6 94 2.5 3.5 3.0 1.5 113 chr2L 3831831 intergenic not near genes chr2L 3831888 intergenic not near genes chr2L 3831944 intergenic not near genes chr2L_6_3830001 chr2L_3830001 RAL-802_95b 55 chr2L 3858851 3858888 chr2L 3858983 3859020 4 130 12.0 12.0 12.0 0.3 169 chr2L 3858851 intergenic not near genes chr2L 3858936 intergenic not near genes chr2L 3859020 intergenic not near genes chr2L_4_3855001 chr2L_3855001 RAL-802_95b 56 chr2L 3908386 3908411 chr2L 3908650 3908684 4 268 2.0 2.5 2.2 1.2 298 chr2L 3908386 intron fred - chr2L 3908535 intron fred - chr2L 3908684 intron fred - chr2L_4_3905001 chr2L_3905001 RAL-802_95b 57 chr2L 4189432 4189479 chr2L 4189568 4189609 7 127 15.5 14.5 15.0 0.4 177 chr2L 4189432 3` UTR CG3714 - chr2L 4189520 3` UTR CG3714 - chr2L 4189609 3` UTR CG3714 - chr2L_7_4185001 chr2L_4185001 RAL-802_95b 58 chr2L 4192970 4193019 chr2L 4193070 4193104 5 90 2.5 4.5 3.5 1.1 134 chr2L 4192970 intron CG3714 - chr2L 4193037 intron CG3714 - chr2L 4193104 intron CG3714 - chr2L_5_4190001 chr2L_4190001 RAL-802_95b 59 chr2L 4411284 4411462 chr2L 4411376 4411552 5 85 3.0 6.0 4.5 0.9 268 chr2L 4411284 intron,intron CG15431 -,CG43055 + chr2L 4411418 intron,exon CG15431 -,CG43055 + chr2L 4411552 intron,exon CG15431 -,CG43055 + chr2L_5_4410001 chr2L_4410001 RAL-802_95b 60 chr2L 4424495 4424541 chr2L 4424626 4424647 6 124 8.5 6.5 7.5 0.7 152 chr2L 4424495 intron CG15431 - chr2L 4424571 intron CG15431 - chr2L 4424647 intron CG15431 - chr2L_6_4420001 chr2L_4420001 RAL-802_95b 61 chr2L 4586958 4586986 chr2L 4587061 4587093 5 106 7.5 8.5 8.0 0.6 135 chr2L 4586958 intron dp - chr2L 4587026 intron dp - chr2L 4587093 intron dp - chr2L_5_4585001 chr2L_4585001 RAL-802_95b 62 chr2L 4601684 4601734 chr2L 4609145 4609195 mdg1 6 7458 2.5 0.0 1.2 2.7 7511 chr2L 4601684 intron dp - chr2L 4605440 intron dp - chr2L 4609195 intron dp - chr2L_6_4605001 chr2L_4605001 RAL-802_95b 63 chr2L 4661826 4661853 chr2L 4669426 4669446 opus 4 7598 3.0 3.0 3.0 1.0 7620 chr2L 4661826 intergenic not near genes chr2L 4665636 intergenic not near genes chr2L 4669446 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-802_95b 64 chr2L 4923236 4923242 chr2L 4923337 4923342 4 104 0.0 1.0 0.5 2.7 106 chr2L 4923236 intron hoe1 - chr2L 4923289 intron hoe1 - chr2L 4923342 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-802_95b 65 chr2L 4953501 4953523 chr2L 4953762 4953784 pogo 4 261 3.0 0.0 1.5 1.6 283 chr2L 4953501 intergenic Jon25Bii - chr2L 4953642 intergenic not near genes chr2L 4953784 intergenic Jon25Bi - chr2L_4_4950001 chr2L_4950001 RAL-802_95b 66 chr2L 5120967 5121000 chr2L 5121070 5121109 4 110 5.0 3.5 4.2 0.8 142 chr2L 5120967 intron Msp300 + chr2L 5121038 intron Msp300 + chr2L 5121109 intron Msp300 + chr2L_4_5120001 chr2L_5120001 RAL-802_95b 67 chr2L 5339027 5339070 chr2L 5339131 5339173 4 104 7.5 9.5 8.5 0.4 146 chr2L 5339027 intergenic CG12512 - chr2L 5339100 intergenic CG12512 - chr2L 5339173 3` UTR CG12512 - chr2L_4_5335001 chr2L_5335001 RAL-802_95b 68 chr2L 5378419 5378452 chr2L 5378508 5378551 7 97 2.0 3.0 2.5 2.0 132 chr2L 5378419 intergenic not near genes chr2L 5378485 intergenic not near genes chr2L 5378551 intergenic not near genes chr2L_7_5375001 chr2L_5375001 RAL-802_95b 69 chr2L 5455407 5455425 chr2L 5455509 5455516 4 99 0.5 1.0 0.8 2.2 109 chr2L 5455407 intergenic not near genes chr2L 5455462 intergenic not near genes chr2L 5455516 intergenic not near genes chr2L_4_5455001 chr2L_5455001 RAL-802_95b 70 chr2L 5516648 5516682 chr2L 5516747 5516781 7 97 5.5 8.5 7.0 0.9 133 chr2L 5516648 intergenic not near genes chr2L 5516714 intergenic not near genes chr2L 5516781 intergenic not near genes chr2L_7_5515001 chr2L_5515001 RAL-802_95b 71 chr2L 5546607 5546619 chr2L 5546701 5546725 4 103 5.5 5.5 5.5 0.6 118 chr2L 5546607 3` UTR Lam + chr2L 5546666 intergenic Lam +,Oscillin + chr2L 5546725 intergenic Lam +,Oscillin + chr2L_4_5545001 chr2L_5545001 RAL-802_95b 72 chr2L 5657539 5657575 chr2L 5657647 5657661 7 104 6.5 6.0 6.2 1.0 122 chr2L 5657539 intron CG31646 - chr2L 5657600 intron CG31646 - chr2L 5657661 intron CG31646 - chr2L_7_5655001 chr2L_5655001 RAL-802_95b 73 chr2L 5672163 5672201 chr2L 5672253 5672290 8 94 1.5 3.5 2.5 2.3 127 chr2L 5672163 intergenic not near genes chr2L 5672226 intergenic not near genes chr2L 5672290 intergenic not near genes chr2L_8_5670001 chr2L_5670001 RAL-802_95b 74 chr2L 5743598 5743638 chr2L 5743712 5743752 9 108 8.5 6.0 7.2 1.1 154 chr2L 5743598 intron CG11030 + chr2L 5743675 intron CG11030 + chr2L 5743752 intron CG11030 + chr2L_9_5740001 chr2L_5740001 RAL-802_95b 75 chr2L 5790015 5790053 chr2L 5790108 5790152 5 98 2.0 2.0 2.0 1.7 137 chr2L 5790015 intron CG9171 - chr2L 5790084 intron CG9171 - chr2L 5790152 intron CG9171 - chr2L_5_5790001 chr2L_5790001 RAL-802_95b 76 chr2L 5805200 5805231 chr2L 5805314 5805353 8 113 4.5 0.5 2.5 2.3 153 chr2L 5805200 intergenic CG11034 + chr2L 5805276 intergenic CG11034 + chr2L 5805353 intergenic CG11034 + chr2L_8_5805001 chr2L_5805001 RAL-802_95b 77 chr2L 5819661 5819667 chr2L 5819765 5819771 6 104 9.5 6.5 8.0 0.7 110 chr2L 5819661 intergenic not near genes chr2L 5819716 intergenic not near genes chr2L 5819771 intergenic not near genes chr2L_6_5815001 chr2L_5815001 RAL-802_95b 78 chr2L 5819683 5819697 chr2L 5819761 5819786 4 87 8.5 6.5 7.5 0.5 103 chr2L 5819683 intergenic not near genes chr2L 5819734 intergenic not near genes chr2L 5819786 intergenic not near genes chr2L_4_5815001 chr2L_5815001 RAL-802_95b 79 chr2L 5827715 5827736 chr2L 5836718 5836764 roo 5 9002 2.5 1.5 2.0 1.7 9049 chr2L 5827715 intron TrissinR + chr2L 5832240 intron TrissinR + chr2L 5836764 intron TrissinR + chr2L_5_5830001 chr2L_5830001 RAL-802_95b 80 chr2L 5926486 5926513 chr2L 5926843 5926870 4 350 5.5 2.0 3.8 0.8 384 chr2L 5926486 intron dsf + chr2L 5926678 intron dsf + chr2L 5926870 intron dsf + chr2L_4_5925001 chr2L_5925001 RAL-802_95b 81 chr2L 5989020 5989064 chr2L 5989111 5989145 10 89 8.0 8.5 8.2 1.1 125 chr2L 5989020 intergenic ifc +,lid - chr2L 5989082 intergenic ifc +,lid - chr2L 5989145 intergenic lid -,ifc + chr2L_10_5985001 chr2L_5985001 RAL-802_95b 82 chr2L 5993344 5993362 chr2L 5993442 5993473 6 107 0.0 4.0 2.0 2.0 129 chr2L 5993344 exon lid - chr2L 5993408 intron lid - chr2L 5993473 exon lid - chr2L_6_5990001 chr2L_5990001 RAL-802_95b 83 chr2L 6136532 6136576 chr2L 6136649 6136692 8 109 0.5 1.5 1.0 4.0 160 chr2L 6136532 intergenic not near genes chr2L 6136612 intergenic not near genes chr2L 6136692 intergenic not near genes chr2L_8_6135001 chr2L_6135001 RAL-802_95b 84 chr2L 6308301 6308336 chr2L 6308404 6308439 4 103 7.0 7.5 7.2 0.5 138 chr2L 6308301 intron Ddr + chr2L 6308370 intron Ddr + chr2L 6308439 intron,3` UTR Ddr +,CG43922 - chr2L_4_6305001 chr2L_6305001 RAL-802_95b 85 chr2L 6426843 6426884 chr2L 6445118 6445157 roo 7 18275 6.0 1.0 3.5 1.6 18314 chr2L 6426843 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445157 exon CG9527 - chr2L_7_6435001 chr2L_6435001 RAL-802_95b 86 chr2L 6799519 6799554 chr2L 6799627 6799637 5 99 5.5 3.5 4.5 0.9 118 chr2L 6799519 5` UTR CR43610 + chr2L 6799578 5` UTR CR43610 + chr2L 6799637 intergenic CR43610 +,CG17376 - chr2L_5_6795001 chr2L_6795001 RAL-802_95b 87 chr2L 6850363 6850401 chr2L 6850460 6850504 9 103 4.0 0.5 2.2 2.8 141 chr2L 6850363 intergenic not near genes chr2L 6850434 intergenic not near genes chr2L 6850504 intergenic not near genes chr2L_9_6850001 chr2L_6850001 RAL-802_95b 88 chr2L 7025899 7025931 chr2L 7026004 7026035 4 105 14.5 16.5 15.5 0.2 136 chr2L 7025899 intron CG31908 - chr2L 7025967 intron CG31908 - chr2L 7026035 intron CG31908 - chr2L_4_7025001 chr2L_7025001 RAL-802_95b 89 chr2L 7164557 7164588 chr2L 7164695 7164722 5 135 12.0 10.5 11.2 0.4 165 chr2L 7164557 intergenic not near genes chr2L 7164640 intergenic not near genes chr2L 7164722 intergenic not near genes chr2L_5_7160001 chr2L_7160001 RAL-802_95b 90 chr2L 7343334 7343359 chr2L 7350440 7350453 roo 5 7111 1.0 0.5 0.8 2.8 7119 chr2L 7343334 intron Wnt6 + chr2L 7346894 intron Wnt6 + chr2L 7350453 intron Wnt6 + chr2L_5_7345001 chr2L_7345001 RAL-802_95b 91 chr2L 7363506 7363557 chr2L 7363604 7363655 5 97 7.0 5.0 6.0 0.7 149 chr2L 7363506 5` UTR Wnt10 + chr2L 7363580 5` UTR Wnt10 + chr2L 7363655 5` UTR Wnt10 + chr2L_5_7360001 chr2L_7360001 RAL-802_95b 92 chr2L 7436197 7436218 chr2L 7436291 7436316 4 99 1.5 3.5 2.5 1.1 119 chr2L 7436197 intergenic not near genes chr2L 7436256 intergenic not near genes chr2L 7436316 intergenic not near genes chr2L_4_7435001 chr2L_7435001 RAL-802_95b 93 chr2L 7437179 7437205 chr2L 7437279 7437305 5 96 10.0 6.5 8.2 0.5 126 chr2L 7437179 intergenic CG5973 + chr2L 7437242 intergenic CG5973 + chr2L 7437305 intergenic CG5973 + chr2L_5_7435001 chr2L_7435001 RAL-802_95b 94 chr2L 7867567 7867573 chr2L 7867681 7867684 4 113 6.0 3.5 4.8 0.7 117 chr2L 7867567 intron Proc - chr2L 7867626 intron Proc - chr2L 7867684 intron Proc - chr2L_4_7865001 chr2L_7865001 RAL-802_95b 95 chr2L 7867575 7867591 chr2L 7867671 7867703 6 107 5.0 3.0 4.0 1.2 128 chr2L 7867575 intron Proc - chr2L 7867639 intron Proc - chr2L 7867703 intron Proc - chr2L_6_7865001 chr2L_7865001 RAL-802_95b 96 chr2L 7959021 7959049 chr2L 7960452 7960458 pogo 6 1424 4.0 1.0 2.5 1.7 1437 chr2L 7959021 intron Snoo - chr2L 7959740 intron Snoo - chr2L 7960458 intron Snoo - chr2L_6_7955001 chr2L_7955001 RAL-802_95b 97 chr2L 7986904 7986918 chr2L 7987019 7987034 4 115 2.0 7.5 4.8 0.7 130 chr2L 7986904 3` UTR pes - chr2L 7986969 3` UTR pes - chr2L 7987034 3` UTR pes - chr2L_4_7985001 chr2L_7985001 RAL-802_95b 98 chr2L 7997022 7997062 chr2L 7997132 7997182 11 118 4.0 4.0 4.0 2.2 160 chr2L 7997022 intron CG7227 - chr2L 7997102 intron CG7227 - chr2L 7997182 intron CG7227 - chr2L_11_7995001 chr2L_7995001 RAL-802_95b 99 chr2L 7999743 7999768 chr2L 7999840 7999865 5 96 3.5 0.5 2.0 1.7 122 chr2L 7999743 intron Wwox - chr2L 7999804 3` UTR Wwox - chr2L 7999865 exon Wwox - chr2L_5_7995001 chr2L_7995001 RAL-802_95b 100 chr2L 8002573 8002616 chr2L 8002719 8002723 6 139 2.0 0.5 1.2 2.7 150 chr2L 8002573 intron Wwox - chr2L 8002648 intron Wwox - chr2L 8002723 intron Wwox - chr2L_6_8000001 chr2L_8000001 RAL-802_95b 101 chr2L 8003059 8003113 chr2L 8003119 8003219 6 98 1.0 0.5 0.8 3.3 160 chr2L 8003059 intron Wwox - chr2L 8003139 intron Wwox - chr2L 8003219 intron Wwox - chr2L_6_8000001 chr2L_8000001 RAL-802_95b 102 chr2L 8018822 8018827 chr2L 8023626 8023631 Doc 4 4804 0.0 7.5 3.8 0.8 4809 chr2L 8018822 intron Tg + chr2L 8021226 intron Tg + chr2L 8023631 intron Tg + chr2L_4_8020001 chr2L_8020001 RAL-802_95b 103 chr2L 8044076 8044131 chr2L 8044175 8044212 6 92 0.0 2.0 1.0 3.0 136 chr2L 8044076 intron CG7466 + chr2L 8044144 intron CG7466 + chr2L 8044212 intron CG7466 + chr2L_6_8040001 chr2L_8040001 RAL-802_95b 104 chr2L 8164609 8164618 chr2L 8164682 8164699 5 88 5.5 6.5 6.0 0.7 90 chr2L 8164609 intron Piezo + chr2L 8164654 intron Piezo + chr2L 8164699 intron Piezo + chr2L_5_8160001 chr2L_8160001 RAL-802_95b 105 chr2L 8171279 8171300 chr2L 8171349 8171401 6 94 0.0 2.0 1.0 3.0 122 chr2L 8171279 intron Piezo + chr2L 8171340 intron Piezo + chr2L 8171401 intron Piezo + chr2L_6_8170001 chr2L_8170001 RAL-802_95b 106 chr2L 8205594 8205607 chr2L 8205709 8205724 6 117 5.0 4.5 4.8 1.0 130 chr2L 8205594 3` UTR CR44120 - chr2L 8205659 intergenic CR44120 -,CR44121 -,CR44119 + chr2L 8205724 intergenic CR44121 -,CR44120 -,CR44119 +,CG8419 + chr2L_6_8205001 chr2L_8205001 RAL-802_95b 107 chr2L 8232024 8232207 chr2L 8232122 8232323 5 112 2.0 10.5 6.2 0.7 299 chr2L 8232024 intron Pvr - chr2L 8232174 intron Pvr - chr2L 8232323 intron Pvr - chr2L_5_8230001 chr2L_8230001 RAL-802_95b 108 chr2L 8452414 8452451 chr2L 8461598 8461642 roo 9 9187 2.0 12.0 7.0 1.1 9228 chr2L 8452414 intron fu12 - chr2L 8457028 intron fu12 - chr2L 8461642 intron fu12 - chr2L_9_8455001 chr2L_8455001 RAL-802_95b 109 chr2L 8554346 8554391 chr2L 8554462 8554502 4 115 3.0 0.5 1.8 1.4 156 chr2L 8554346 intron Sema-1a + chr2L 8554424 intron Sema-1a + chr2L 8554502 intron Sema-1a + chr2L_4_8550001 chr2L_8550001 RAL-802_95b 110 chr2L 8588887 8588926 chr2L 8588998 8589037 8 106 1.5 2.0 1.8 2.9 150 chr2L 8588887 intron Sema-1a + chr2L 8588962 intron Sema-1a + chr2L 8589037 intron Sema-1a + chr2L_8_8585001 chr2L_8585001 RAL-802_95b 111 chr2L 8612834 8612868 chr2L 8612931 8612965 11 96 1.0 3.5 2.2 3.4 131 chr2L 8612834 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612965 intron Sema-1a + chr2L_11_8610001 chr2L_8610001 RAL-802_95b 112 chr2L 8719189 8719231 chr2L 8719285 8719322 6 90 1.5 0.5 1.0 3.0 133 chr2L 8719189 intron raw - chr2L 8719256 intron raw - chr2L 8719322 intron raw - chr2L_6_8715001 chr2L_8715001 RAL-802_95b 113 chr2L 8723096 8723148 chr2L 8731493 8731530 Tirant 8 8391 1.5 0.5 1.0 4.0 8434 chr2L 8723096 intron raw - chr2L 8727313 intron raw - chr2L 8731530 intron raw - chr2L_8_8725001 chr2L_8725001 RAL-802_95b 114 chr2L 8772783 8772798 chr2L 8772878 8772893 4 99 8.0 3.5 5.8 0.6 110 chr2L 8772783 intergenic CG9466 -,CG9465 - chr2L 8772838 intergenic CG9466 -,CG9465 - chr2L 8772893 intergenic CG9466 - chr2L_4_8770001 chr2L_8770001 RAL-802_95b 115 chr2L 8820926 8820956 chr2L 8821025 8821040 6 96 3.5 4.5 4.0 1.2 114 chr2L 8820926 intergenic not near genes chr2L 8820983 intergenic not near genes chr2L 8821040 intergenic not near genes chr2L_6_8820001 chr2L_8820001 RAL-802_95b 116 chr2L 8985650 8985680 chr2L 8985825 8985850 7 173 8.0 5.0 6.5 0.9 200 chr2L 8985650 intergenic rost - chr2L 8985750 intergenic rost - chr2L 8985850 intergenic rost - chr2L_7_8985001 chr2L_8985001 RAL-802_95b 117 chr2L 8987974 8988012 chr2L 8988074 8988113 9 100 6.0 7.0 6.5 1.2 139 chr2L 8987974 intron rost - chr2L 8988044 intron rost - chr2L 8988113 intron rost - chr2L_9_8985001 chr2L_8985001 RAL-802_95b 118 chr2L 8997263 8997310 chr2L 8997634 8997654 4 353 16.5 17.0 16.8 0.2 391 chr2L 8997263 5` UTR alien - chr2L 8997458 intergenic alien -,CG18661 + chr2L 8997654 5` UTR CG18661 + chr2L_4_8995001 chr2L_8995001 RAL-802_95b 119 chr2L 9000259 9000302 chr2L 9007787 9007803 roo 10 7523 2.0 4.0 3.0 2.5 7544 chr2L 9000259 intergenic Try29F + chr2L 9004031 intergenic not near genes chr2L 9007803 intergenic not near genes chr2L_10_9000001 chr2L_9000001 RAL-802_95b 120 chr2L 9156552 9156583 chr2L 9156630 9156654 4 86 6.0 8.0 7.0 0.5 102 chr2L 9156552 exon CG32982 + chr2L 9156603 intron CG32982 + chr2L 9156654 intron CG32982 + chr2L_4_9155001 chr2L_9155001 RAL-802_95b 121 chr2L 9158773 9158824 chr2L 9158890 9158941 6 114 1.0 0.0 0.5 4.0 168 chr2L 9158773 intron CG32982 + chr2L 9158857 intron CG32982 + chr2L 9158941 intron CG32982 + chr2L_6_9155001 chr2L_9155001 RAL-802_95b 122 chr2L 9217982 9217989 chr2L 9222759 9222796 Doc 7 4802 3.5 3.5 3.5 1.6 4814 chr2L 9217982 intron tai + chr2L 9220389 intron tai + chr2L 9222796 intron tai + chr2L_7_9220001 chr2L_9220001 RAL-802_95b 123 chr2L 9225848 9225880 chr2L 9225948 9225980 6 103 6.5 6.0 6.2 0.8 132 chr2L 9225848 intron tai + chr2L 9225914 intron tai + chr2L 9225980 intron tai + chr2L_6_9225001 chr2L_9225001 RAL-802_95b 124 chr2L 9251127 9251149 chr2L 9251244 9251266 4 115 4.0 5.0 4.5 0.7 139 chr2L 9251127 intergenic aust -,borr - chr2L 9251196 intergenic aust -,borr - chr2L 9251266 intergenic borr -,aust - chr2L_4_9250001 chr2L_9250001 RAL-802_95b 125 chr2L 9264326 9264382 chr2L 9264446 9264492 11 118 8.5 9.5 9.0 1.1 166 chr2L 9264326 intron Ggamma30A + chr2L 9264409 intron Ggamma30A + chr2L 9264492 intron Ggamma30A + chr2L_11_9260001 chr2L_9260001 RAL-802_95b 126 chr2L 9287323 9287327 chr2L 9287433 9287442 4 112 3.5 5.0 4.2 0.8 119 chr2L 9287323 intron Ggamma30A + chr2L 9287382 intron Ggamma30A + chr2L 9287442 intron Ggamma30A + chr2L_4_9285001 chr2L_9285001 RAL-802_95b 127 chr2L 9297360 9297398 chr2L 9297457 9297495 11 96 4.5 1.5 3.0 2.8 135 chr2L 9297360 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297495 3` UTR Ggamma30A + chr2L_11_9295001 chr2L_9295001 RAL-802_95b 128 chr2L 9357249 9357277 chr2L 9357339 9357378 4 93 10.0 7.5 8.8 0.4 129 chr2L 9357249 intergenic not near genes chr2L 9357314 intergenic not near genes chr2L 9357378 intergenic not near genes chr2L_4_9355001 chr2L_9355001 RAL-802_95b 129 chr2L 9385113 9385155 chr2L 9385208 9385215 9 97 4.5 5.0 4.8 1.6 102 chr2L 9385113 intron Shawl - chr2L 9385164 intron Shawl - chr2L 9385215 intron Shawl - chr2L_9_9385001 chr2L_9385001 RAL-802_95b 130 chr2L 9387234 9387270 chr2L 9387352 9387388 10 113 3.0 0.5 1.8 3.6 154 chr2L 9387234 intron Shawl - chr2L 9387311 intron Shawl - chr2L 9387388 intron,5` UTR Shawl -,Aldh + chr2L_10_9385001 chr2L_9385001 RAL-802_95b 131 chr2L 9420991 9421025 chr2L 9421134 9421173 4 148 0.0 1.5 0.8 2.2 182 chr2L 9420991 intron Mco1 + chr2L 9421082 intron Mco1 + chr2L 9421173 intron Mco1 + chr2L_4_9420001 chr2L_9420001 RAL-802_95b 132 chr2L 9439600 9439637 chr2L 9439698 9439725 6 96 7.0 5.0 6.0 0.9 125 chr2L 9439600 intron numb + chr2L 9439662 intron numb + chr2L 9439725 intron numb + chr2L_6_9435001 chr2L_9435001 RAL-802_95b 133 chr2L 9457050 9457095 chr2L 9457147 9457172 8 93 8.0 5.0 6.5 1.1 122 chr2L 9457050 intron numb + chr2L 9457111 intron numb + chr2L 9457172 intron numb + chr2L_8_9455001 chr2L_9455001 RAL-802_95b 134 chr2L 9495159 9495186 chr2L 9495254 9495292 10 112 9.0 5.0 7.0 1.2 133 chr2L 9495159 intergenic Gdi -,CG33298 + chr2L 9495226 intergenic CG33298 +,Gdi - chr2L 9495292 intergenic CG33298 +,Gdi - chr2L_10_9495001 chr2L_9495001 RAL-802_95b 135 chr2L 9498349 9498385 chr2L 9498434 9498470 7 91 10.0 6.0 8.0 0.8 121 chr2L 9498349 intron CG33298 + chr2L 9498410 intron CG33298 + chr2L 9498470 intron CG33298 + chr2L_7_9495001 chr2L_9495001 RAL-802_95b 136 chr2L 9619480 9619518 chr2L 9619837 9619875 5 355 3.5 4.5 4.0 1.0 395 chr2L 9619480 intron GlcAT-S + chr2L 9619678 intron GlcAT-S + chr2L 9619875 intron GlcAT-S + chr2L_5_9615001 chr2L_9615001 RAL-802_95b 137 chr2L 9775985 9775997 chr2L 9776072 9776099 4 96 10.5 15.5 13.0 0.3 114 chr2L 9775985 intergenic not near genes chr2L 9776042 intergenic not near genes chr2L 9776099 intergenic not near genes chr2L_4_9775001 chr2L_9775001 RAL-802_95b 138 chr2L 9873749 9873789 chr2L 9873859 9873885 4 106 3.0 2.0 2.5 1.1 136 chr2L 9873749 intron nAChRalpha6 - chr2L 9873817 intron nAChRalpha6 - chr2L 9873885 intron nAChRalpha6 - chr2L_4_9870001 chr2L_9870001 RAL-802_95b 139 chr2L 9892490 9892526 chr2L 9892586 9892622 4 96 11.5 10.0 10.8 0.3 132 chr2L 9892490 intron mtDNA-helicase - chr2L 9892556 intron mtDNA-helicase - chr2L 9892622 intron mtDNA-helicase - chr2L_4_9890001 chr2L_9890001 RAL-802_95b 140 chr2L 9973738 9973758 chr2L 9980850 9980851 HMS-Beagle 4 7112 0.0 2.0 1.0 2.0 7113 chr2L 9973738 intergenic not near genes chr2L 9977294 intergenic not near genes chr2L 9980851 intergenic not near genes chr2L_4_9975001 chr2L_9975001 RAL-802_95b 141 chr2L 10232912 10232945 chr2L 10233010 10233032 7 95 3.5 9.0 6.2 1.0 120 chr2L 10232912 intron eEF1delta + chr2L 10232972 intron eEF1delta + chr2L 10233032 intron eEF1delta + chr2L_7_10230001 chr2L_10230001 RAL-802_95b 142 chr2L 10258423 10258437 chr2L 10258518 10258542 5 100 2.0 4.0 3.0 1.2 119 chr2L 10258423 intron Pten - chr2L 10258482 intron Pten - chr2L 10258542 intron Pten - chr2L_5_10255001 chr2L_10255001 RAL-802_95b 143 chr2L 10276181 10276209 chr2L 10276279 10276307 5 98 18.0 18.0 18.0 0.3 126 chr2L 10276181 intron Utx - chr2L 10276244 intron Utx - chr2L 10276307 intron Utx - chr2L_5_10275001 chr2L_10275001 RAL-802_95b 144 chr2L 10314493 10314533 chr2L 10314622 10314652 10 127 1.5 4.0 2.8 2.6 159 chr2L 10314493 intergenic CG5384 -,CG4972 + chr2L 10314572 intergenic CG5384 -,CG4972 + chr2L 10314652 intergenic CG4972 +,CG5384 - chr2L_10_10310001 chr2L_10310001 RAL-802_95b 145 chr2L 10426610 10426650 chr2L 10426722 10426762 5 110 1.5 2.5 2.0 1.7 152 chr2L 10426610 5` UTR SmB - chr2L 10426686 intergenic SmB -,KdelR + chr2L 10426762 intergenic KdelR +,SmB - chr2L_5_10425001 chr2L_10425001 RAL-802_95b 146 chr2L 10515348 10515390 chr2L 10515461 10515467 8 100 5.5 6.5 6.0 1.1 119 chr2L 10515348 intron,intron CG45083 -,Fatp - chr2L 10515408 intron,intron CG45083 -,Fatp - chr2L 10515467 intron,intron CG45083 -,Fatp - chr2L_8_10515001 chr2L_10515001 RAL-802_95b 147 chr2L 10572685 10572726 chr2L 10572786 10572827 8 98 7.0 9.0 8.0 0.9 142 chr2L 10572685 intron Trim9 + chr2L 10572756 intron Trim9 + chr2L 10572827 intron Trim9 + chr2L_8_10570001 chr2L_10570001 RAL-802_95b 148 chr2L 10580771 10580822 chr2L 10580872 10580918 5 100 4.0 3.5 3.8 1.0 147 chr2L 10580771 intron Trim9 + chr2L 10580844 intron Trim9 + chr2L 10580918 intron Trim9 + chr2L_5_10580001 chr2L_10580001 RAL-802_95b 149 chr2L 10592825 10592875 chr2L 10600506 10600553 opus 8 7676 0.5 3.0 1.8 2.9 7728 chr2L 10592825 intron Trim9 + chr2L 10596689 intron Trim9 + chr2L 10600553 intron Trim9 + chr2L_8_10595001 chr2L_10595001 RAL-802_95b 150 chr2L 10634754 10634788 chr2L 10634853 10634888 7 96 2.5 2.0 2.2 2.2 134 chr2L 10634754 intron CG7329 - chr2L 10634821 intron CG7329 - chr2L 10634888 intron CG7329 - chr2L_7_10630001 chr2L_10630001 RAL-802_95b 151 chr2L 10641424 10641458 chr2L 10644200 10644234 5 2782 20.5 17.0 18.8 0.3 2810 chr2L 10641424 exon CG31872 + chr2L 10642829 exon CG31872 + chr2L 10644234 intron CG18284 + chr2L_5_10640001 chr2L_10640001 RAL-802_95b 152 chr2L 10656573 10656608 chr2L 10656669 10656704 9 95 7.0 5.0 6.0 1.3 131 chr2L 10656573 intergenic not near genes chr2L 10656638 intergenic not near genes chr2L 10656704 intergenic not near genes chr2L_9_10655001 chr2L_10655001 RAL-802_95b 153 chr2L 10683436 10683472 chr2L 10683525 10683571 4 96 13.5 12.0 12.8 0.3 135 chr2L 10683436 3` UTR CG7299 - chr2L 10683504 3` UTR CG7299 - chr2L 10683571 3` UTR CG7299 - chr2L_4_10680001 chr2L_10680001 RAL-802_95b 154 chr2L 10688536 10688571 chr2L 10688632 10688667 4 88 5.0 8.0 6.5 0.5 131 chr2L 10688536 intergenic CG7294 - chr2L 10688602 intergenic CG7294 - chr2L 10688667 intergenic CG7294 - chr2L_4_10685001 chr2L_10685001 RAL-802_95b 155 chr2L 10705546 10705584 chr2L 10705656 10705694 6 108 0.5 0.5 0.5 4.0 148 chr2L 10705546 intron Lip2 - chr2L 10705620 intron Lip2 - chr2L 10705694 intron Lip2 - chr2L_6_10705001 chr2L_10705001 RAL-802_95b 156 chr2L 10793305 10793328 chr2L 10793397 10793425 5 96 7.5 3.5 5.5 0.8 120 chr2L 10793305 intron CG31869 - chr2L 10793365 intron CG31869 - chr2L 10793425 intron CG31869 - chr2L_5_10790001 chr2L_10790001 RAL-802_95b 157 chr2L 10836232 10836354 chr2L 10836323 10836430 11 97 3.0 2.0 2.5 3.1 198 chr2L 10836232 intron Nos - chr2L 10836331 intron Nos - chr2L 10836430 intron Nos - chr2L_11_10835001 chr2L_10835001 RAL-802_95b 158 chr2L 10852156 10852182 chr2L 10852265 10852276 8 105 3.5 6.0 4.8 1.4 120 chr2L 10852156 intron CG43129 + chr2L 10852216 intron CG43129 + chr2L 10852276 intron CG43129 + chr2L_8_10850001 chr2L_10850001 RAL-802_95b 159 chr2L 11083161 11083161 chr2L 11083218 11083258 4 83 5.5 5.5 5.5 0.6 97 chr2L 11083161 intergenic AstCC - chr2L 11083210 intergenic AstCC - chr2L 11083258 intergenic AstCC - chr2L_4_11080001 chr2L_11080001 RAL-802_95b 160 chr2L 11169459 11169490 chr2L 11169614 11169645 4 154 13.5 15.0 14.2 0.3 186 chr2L 11169459 intron Ca-beta - chr2L 11169552 intron Ca-beta - chr2L 11169645 intron Ca-beta - chr2L_4_11165001 chr2L_11165001 RAL-802_95b 161 chr2L 11198490 11198511 chr2L 11198593 11198608 5 99 0.0 2.5 1.2 2.3 118 chr2L 11198490 intron Ca-beta - chr2L 11198549 intron Ca-beta - chr2L 11198608 intron Ca-beta - chr2L_5_11195001 chr2L_11195001 RAL-802_95b 162 chr2L 11303038 11303084 chr2L 11303139 11303185 4 98 2.0 1.0 1.5 1.6 147 chr2L 11303038 intergenic not near genes chr2L 11303112 intergenic not near genes chr2L 11303185 intergenic not near genes chr2L_4_11300001 chr2L_11300001 RAL-802_95b 163 chr2L 11450102 11450156 chr2L 11450208 11450228 4 98 5.0 7.0 6.0 0.6 126 chr2L 11450102 intergenic not near genes chr2L 11450165 intergenic not near genes chr2L 11450228 intergenic not near genes chr2L_4_11450001 chr2L_11450001 RAL-802_95b 164 chr2L 11458944 11458972 chr2L 11459070 11459108 6 129 1.5 3.5 2.5 1.7 164 chr2L 11458944 intergenic not near genes chr2L 11459026 intergenic not near genes chr2L 11459108 intergenic not near genes chr2L_6_11455001 chr2L_11455001 RAL-802_95b 165 chr2L 11467965 11467999 chr2L 11468278 11468312 6 311 9.5 3.0 6.2 0.8 347 chr2L 11467965 intergenic not near genes chr2L 11468138 intergenic not near genes chr2L 11468312 intergenic not near genes chr2L_6_11465001 chr2L_11465001 RAL-802_95b 166 chr2L 11537746 11537784 chr2L 11537873 11537920 8 130 0.5 3.0 1.8 2.9 174 chr2L 11537746 intergenic not near genes chr2L 11537833 intergenic not near genes chr2L 11537920 intergenic not near genes chr2L_8_11535001 chr2L_11535001 RAL-802_95b 167 chr2L 11540585 11540611 chr2L 11548007 11548033 Tabor 4 7420 3.0 4.5 3.8 0.8 7448 chr2L 11540585 intergenic not near genes chr2L 11544309 intergenic not near genes chr2L 11548033 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-802_95b 168 chr2L 11672119 11672155 chr2L 11672246 11672282 4 122 9.5 5.0 7.2 0.5 163 chr2L 11672119 intergenic not near genes chr2L 11672200 intergenic not near genes chr2L 11672282 intergenic not near genes chr2L_4_11670001 chr2L_11670001 RAL-802_95b 169 chr2L 11676315 11676349 chr2L 11676416 11676456 4 106 0.0 1.0 0.5 2.7 141 chr2L 11676315 intergenic not near genes chr2L 11676386 intergenic not near genes chr2L 11676456 intergenic not near genes chr2L_4_11675001 chr2L_11675001 RAL-802_95b 170 chr2L 11866987 11867004 chr2L 11867119 11867136 4 131 2.0 3.0 2.5 1.1 149 chr2L 11866987 intron Pde1c - chr2L 11867062 intron Pde1c - chr2L 11867136 intron Pde1c - chr2L_4_11865001 chr2L_11865001 RAL-802_95b 171 chr2L 11892521 11892550 chr2L 11892635 11892664 8 111 3.0 4.0 3.5 1.8 143 chr2L 11892521 intron Pde1c - chr2L 11892592 intron Pde1c - chr2L 11892664 intron Pde1c - chr2L_8_11890001 chr2L_11890001 RAL-802_95b 172 chr2L 11944436 11944446 chr2L 11944546 11944549 4 108 8.0 0.0 4.0 0.8 113 chr2L 11944436 intron Cry + chr2L 11944492 intron Cry + chr2L 11944549 intron Cry + chr2L_4_11940001 chr2L_11940001 RAL-802_95b 173 chr2L 12031407 12031417 chr2L 12031508 12031518 5 101 6.5 4.5 5.5 0.8 111 chr2L 12031407 intron dmGlut + chr2L 12031462 intron dmGlut + chr2L 12031518 intron dmGlut + chr2L_5_12030001 chr2L_12030001 RAL-802_95b 174 chr2L 12067324 12067337 chr2L 12074386 12074409 297 4 7070 5.0 3.5 4.2 0.8 7085 chr2L 12067324 intergenic not near genes chr2L 12070866 intergenic not near genes chr2L 12074409 intergenic not near genes chr2L_4_12070001 chr2L_12070001 RAL-802_95b 175 chr2L 12067347 12067363 chr2L 12074381 12074395 297 8 7061 2.5 3.0 2.8 2.1 7048 chr2L 12067347 intergenic not near genes chr2L 12070871 intergenic not near genes chr2L 12074395 intergenic not near genes chr2L_8_12070001 chr2L_12070001 RAL-802_95b 176 chr2L 12132705 12132746 chr2L 12132811 12132830 9 104 0.0 1.0 0.5 6.0 125 chr2L 12132705 intron rho-6 - chr2L 12132768 intron rho-6 - chr2L 12132830 intron rho-6 - chr2L_9_12130001 chr2L_12130001 RAL-802_95b 177 chr2L 12269821 12269869 chr2L 12270056 12270104 12 235 4.0 7.5 5.8 1.8 283 chr2L 12269821 intron aret + chr2L 12269962 intron aret + chr2L 12270104 intron aret + chr2L_12_12265001 chr2L_12265001 RAL-802_95b 178 chr2L 12272168 12272197 chr2L 12272264 12272287 4 92 3.5 5.5 4.5 0.7 119 chr2L 12272168 intron aret + chr2L 12272228 intron aret + chr2L 12272287 intron aret + chr2L_4_12270001 chr2L_12270001 RAL-802_95b 179 chr2L 12294230 12294276 chr2L 12294332 12294378 8 99 2.5 0.5 1.5 3.2 148 chr2L 12294230 intron aret + chr2L 12294304 intron aret + chr2L 12294378 intron aret + chr2L_8_12290001 chr2L_12290001 RAL-802_95b 180 chr2L 12305395 12305434 chr2L 12305503 12305507 5 100 2.5 2.0 2.2 1.6 112 chr2L 12305395 intron aret + chr2L 12305451 intron aret + chr2L 12305507 intron aret + chr2L_5_12305001 chr2L_12305001 RAL-802_95b 181 chr2L 12366847 12366892 chr2L 12366953 12366980 9 103 4.5 7.0 5.8 1.3 133 chr2L 12366847 intron bru-2 + chr2L 12366914 intron bru-2 + chr2L 12366980 intron bru-2 + chr2L_9_12365001 chr2L_12365001 RAL-802_95b 182 chr2L 12529211 12529250 chr2L 12529383 12529422 4 172 7.5 5.5 6.5 0.5 211 chr2L 12529211 intron bun - chr2L 12529316 intron bun - chr2L 12529422 intron bun - chr2L_4_12525001 chr2L_12525001 RAL-802_95b 183 chr2L 12558328 12558351 chr2L 12565462 12565500 HMS-Beagle 4 7144 0.0 0.5 0.2 3.3 7172 chr2L 12558328 intergenic not near genes chr2L 12561914 intergenic not near genes chr2L 12565500 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-802_95b 184 chr2L 12760230 12760257 chr2L 12760346 12760373 5 116 4.0 3.0 3.5 1.1 143 chr2L 12760230 intergenic CG15483 - chr2L 12760302 intergenic CG15483 - chr2L 12760373 3` UTR CG15483 - chr2L_5_12760001 chr2L_12760001 RAL-802_95b 185 chr2L 12763814 12763872 chr2L 12764044 12764044 BS 5 210 1.5 0.5 1.0 2.5 230 chr2L 12763814 intergenic not near genes chr2L 12763929 intergenic not near genes chr2L 12764044 intergenic not near genes chr2L_5_12760001 chr2L_12760001 RAL-802_95b 186 chr2L 12766741 12766771 chr2L 12766839 12766868 5 96 4.5 1.0 2.8 1.3 127 chr2L 12766741 intergenic not near genes chr2L 12766804 intergenic not near genes chr2L 12766868 intergenic not near genes chr2L_5_12765001 chr2L_12765001 RAL-802_95b 187 chr2L 12781785 12781809 chr2L 12789248 12789281 Quasimodo 7 7463 3.5 2.0 2.8 1.8 7496 chr2L 12781785 intergenic not near genes chr2L 12785533 intergenic not near genes chr2L 12789281 intergenic not near genes chr2L_7_12785001 chr2L_12785001 RAL-802_95b 188 chr2L 12791607 12791627 chr2L 12795282 12795312 F-element 7 3686 1.0 5.0 3.0 1.8 3705 chr2L 12791607 intergenic not near genes chr2L 12793460 intergenic not near genes chr2L 12795312 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-802_95b 189 chr2L 13036241 13036269 chr2L 13036487 13036491 X-element 6 253 1.0 3.5 2.2 1.9 250 chr2L 13036241 intron CG9932 - chr2L 13036366 intron CG9932 - chr2L 13036491 intron CG9932 - chr2L_6_13035001 chr2L_13035001 RAL-802_95b 190 chr2L 13085646 13085678 chr2L 13085730 13085778 5 94 9.0 8.5 8.8 0.5 132 chr2L 13085646 intergenic not near genes chr2L 13085712 intergenic not near genes chr2L 13085778 intergenic not near genes chr2L_5_13085001 chr2L_13085001 RAL-802_95b 191 chr2L 13231880 13231905 chr2L 13232011 13232036 4 126 12.5 10.5 11.5 0.3 156 chr2L 13231880 intergenic Prosalpha6T + chr2L 13231958 intergenic Prosalpha6T + chr2L 13232036 intergenic Prosalpha6T + chr2L_4_13230001 chr2L_13230001 RAL-802_95b 192 chr2L 13255263 13255295 chr2L 13255410 13255443 4 156 0.0 1.0 0.5 2.7 180 chr2L 13255263 intron CG31728 + chr2L 13255353 intron CG31728 + chr2L 13255443 exon CG31728 + chr2L_4_13255001 chr2L_13255001 RAL-802_95b 193 chr2L 13405631 13405674 chr2L 13410445 13410455 Doc 6 4800 1.0 3.0 2.0 2.0 4824 chr2L 13405631 exon CG7110 + chr2L 13408043 intron CG7110 + chr2L 13410455 intron CG7110 + chr2L_6_13405001 chr2L_13405001 RAL-802_95b 194 chr2L 13420869 13420886 chr2L 13420980 13420997 6 110 8.0 7.0 7.5 0.7 128 chr2L 13420869 intron CG42784 + chr2L 13420933 intron CG42784 + chr2L 13420997 intron CG42784 + chr2L_6_13420001 chr2L_13420001 RAL-802_95b 195 chr2L 13449454 13449492 chr2L 13456910 13456948 Quasimodo 5 7454 9.0 9.0 9.0 0.5 7494 chr2L 13449454 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453201 intron CG42784 + chr2L 13456948 intron CG42784 + chr2L_5_13450001 chr2L_13450001 RAL-802_95b 196 chr2L 13481433 13481471 chr2L 13482060 13482093 jockey 11 621 2.0 1.5 1.8 3.9 660 chr2L 13481433 intron CG42784 + chr2L 13481763 intron CG42784 + chr2L 13482093 intron CG42784 + chr2L_11_13480001 chr2L_13480001 RAL-802_95b 197 chr2L 13522115 13522153 chr2L 13527653 13527690 Transpac 4 5538 4.5 3.0 3.8 0.8 5575 chr2L 13522115 intron B4 - chr2L 13524902 intron B4 - chr2L 13527690 intron B4 - chr2L_4_13520001 chr2L_13520001 RAL-802_95b 198 chr2L 13749192 13749211 chr2L 13749295 13749314 5 100 0.0 0.0 0.0 5.0 122 chr2L 13749192 intron,intron CR44846 +,TM9SF4 + chr2L 13749253 intron,intron CR44846 +,TM9SF4 + chr2L 13749314 intron,intron CR44846 +,TM9SF4 + chr2L_5_13745001 chr2L_13745001 RAL-802_95b 199 chr2L 13800157 13800194 chr2L 13800281 13800301 4 120 7.0 10.0 8.5 0.4 144 chr2L 13800157 intergenic Sec71 + chr2L 13800229 intergenic not near genes chr2L 13800301 intergenic not near genes chr2L_4_13800001 chr2L_13800001 RAL-802_95b 200 chr2L 13842124 13842165 chr2L 13842215 13842269 9 103 0.5 0.5 0.5 6.0 145 chr2L 13842124 intron CenG1A + chr2L 13842196 intron CenG1A + chr2L 13842269 intron CenG1A + chr2L_9_13840001 chr2L_13840001 RAL-802_95b 201 chr2L 13851706 13851752 chr2L 13851831 13851877 12 121 6.0 7.0 6.5 1.6 171 chr2L 13851706 intron CenG1A + chr2L 13851792 intron CenG1A + chr2L 13851877 intron CenG1A + chr2L_12_13850001 chr2L_13850001 RAL-802_95b 202 chr2L 13853075 13853086 chr2L 13862245 13862256 roo 4 9170 4.5 7.0 5.8 0.6 9181 chr2L 13853075 intron CenG1A + chr2L 13857666 intron CenG1A + chr2L 13862256 intron CenG1A + chr2L_4_13855001 chr2L_13855001 RAL-802_95b 203 chr2L 13853088 13853106 chr2L 13862243 13862271 roo 5 9164 3.5 6.0 4.8 0.9 9183 chr2L 13853088 intron CenG1A + chr2L 13857680 intron CenG1A + chr2L 13862271 intron CenG1A + chr2L_5_13855001 chr2L_13855001 RAL-802_95b 204 chr2L 13987194 13987229 chr2L 13987295 13987330 7 101 5.5 1.0 3.2 1.7 136 chr2L 13987194 intron rk - chr2L 13987262 intron rk - chr2L 13987330 intron rk - chr2L_7_13985001 chr2L_13985001 RAL-802_95b 205 chr2L 14109514 14109532 chr2L 14109619 14109643 6 108 7.5 5.5 6.5 0.8 129 chr2L 14109514 intergenic CG15293 -,CG31769 - chr2L 14109578 intergenic CG31769 -,CG15293 - chr2L 14109643 3` UTR CG31769 - chr2L_6_14105001 chr2L_14105001 RAL-802_95b 206 chr2L 14149700 14149749 chr2L 14149797 14149846 4 97 5.5 7.0 6.2 0.6 146 chr2L 14149700 intron CG17341 + chr2L 14149773 intron CG17341 + chr2L 14149846 intron CG17341 + chr2L_4_14145001 chr2L_14145001 RAL-802_95b 207 chr2L 14236228 14236271 chr2L 14236342 14236388 6 114 2.0 1.5 1.8 2.1 160 chr2L 14236228 5` UTR CR44728 + chr2L 14236308 intergenic CR44728 + chr2L 14236388 intergenic CR44728 + chr2L_6_14235001 chr2L_14235001 RAL-802_95b 208 chr2L 14525575 14525603 chr2L 14525662 14525678 4 91 6.5 9.5 8.0 0.4 103 chr2L 14525575 exon CG33648 + chr2L 14525626 3` UTR CG33648 + chr2L 14525678 intergenic CG33648 + chr2L_4_14525001 chr2L_14525001 RAL-802_95b 209 chr2L 14588369 14588395 chr2L 14588543 14588565 7 172 3.0 1.5 2.2 2.2 196 chr2L 14588369 intergenic CG42680 - chr2L 14588467 intergenic CG42680 - chr2L 14588565 intergenic CG42680 - chr2L_7_14585001 chr2L_14585001 RAL-802_95b 210 chr2L 14694252 14694276 chr2L 14694396 14694420 5 142 5.5 3.0 4.2 1.0 168 chr2L 14694252 intergenic not near genes chr2L 14694336 intergenic not near genes chr2L 14694420 intergenic not near genes chr2L_5_14690001 chr2L_14690001 RAL-802_95b 211 chr2L 14768915 14768958 chr2L 14769013 14769046 7 95 0.0 3.0 1.5 2.8 131 chr2L 14768915 intergenic not near genes chr2L 14768980 intergenic not near genes chr2L 14769046 intergenic not near genes chr2L_7_14765001 chr2L_14765001 RAL-802_95b 212 chr2L 14889934 14889974 chr2L 14890379 14890419 jockey 4 445 1.5 1.0 1.2 1.8 485 chr2L 14889934 intergenic not near genes chr2L 14890176 intergenic not near genes chr2L 14890419 intergenic not near genes chr2L_4_14890001 chr2L_14890001 RAL-802_95b 213 chr2L 14982149 14982288 chr2L 14982276 14982394 8 109 2.0 0.0 1.0 4.0 245 chr2L 14982149 intron mol - chr2L 14982272 intron mol - chr2L 14982394 intron mol - chr2L_8_14980001 chr2L_14980001 RAL-802_95b 214 chr2L 14984362 14984404 chr2L 14991984 14992026 opus 4 7620 2.5 1.5 2.0 1.3 7664 chr2L 14984362 intron mol - chr2L 14988194 intron mol - chr2L 14992026 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-802_95b 215 chr2L 15014622 15014652 chr2L 15014704 15014751 4 92 0.5 4.5 2.5 1.1 129 chr2L 15014622 intergenic not near genes chr2L 15014686 intergenic not near genes chr2L 15014751 intergenic not near genes chr2L_4_15010001 chr2L_15010001 RAL-802_95b 216 chr2L 15044713 15044731 chr2L 15044805 15044827 6 95 3.5 0.0 1.8 2.1 114 chr2L 15044713 intergenic ck - chr2L 15044770 intergenic ck - chr2L 15044827 intergenic ck - chr2L_6_15040001 chr2L_15040001 RAL-802_95b 217 chr2L 15078048 15078099 chr2L 15078156 15078188 8 100 6.5 6.5 6.5 1.1 140 chr2L 15078048 intron CG15270 + chr2L 15078118 intron CG15270 + chr2L 15078188 intron CG15270 + chr2L_8_15075001 chr2L_15075001 RAL-802_95b 218 chr2L 15082654 15082681 chr2L 15082768 15082795 6 114 6.5 9.5 8.0 0.7 141 chr2L 15082654 intron CG15270 + chr2L 15082724 intron CG15270 + chr2L 15082795 intron CG15270 + chr2L_6_15080001 chr2L_15080001 RAL-802_95b 219 chr2L 15261140 15261186 chr2L 15261245 15261291 10 100 7.5 7.5 7.5 1.2 151 chr2L 15261140 intron yuri - chr2L 15261216 intron yuri - chr2L 15261291 intron yuri - chr2L_10_15260001 chr2L_15260001 RAL-802_95b 220 chr2L 15446038 15446080 chr2L 15453527 15453556 blood 7 7486 2.0 2.5 2.2 2.2 7518 chr2L 15446038 intergenic not near genes chr2L 15449797 intergenic not near genes chr2L 15453556 intergenic not near genes chr2L_7_15445001 chr2L_15445001 RAL-802_95b 221 chr2L 15499895 15499940 chr2L 15500003 15500032 7 99 0.5 3.0 1.8 2.5 137 chr2L 15499895 intron lace + chr2L 15499964 intron lace + chr2L 15500032 intron lace + chr2L_7_15495001 chr2L_15495001 RAL-802_95b 222 chr2L 15521613 15521654 chr2L 15521716 15521757 5 100 9.5 12.5 11.0 0.4 144 chr2L 15521613 intergenic CR43761 + chr2L 15521685 intergenic CR43761 + chr2L 15521757 intergenic CR43761 + chr2L_5_15520001 chr2L_15520001 RAL-802_95b 223 chr2L 15574973 15574999 chr2L 15575398 15575415 5 420 3.0 4.5 3.8 1.0 442 chr2L 15574973 intron kek3 + chr2L 15575194 intron kek3 + chr2L 15575415 intron kek3 + chr2L_5_15575001 chr2L_15575001 RAL-802_95b 224 chr2L 15586411 15586443 chr2L 15593473 15593485 297 7 7060 2.5 3.5 3.0 1.8 7074 chr2L 15586411 intergenic not near genes chr2L 15589948 intergenic not near genes chr2L 15593485 intergenic not near genes chr2L_7_15585001 chr2L_15585001 RAL-802_95b 225 chr2L 15730879 15730890 chr2L 15730974 15730995 4 102 2.5 3.5 3.0 1.0 116 chr2L 15730879 intron CycE - chr2L 15730937 intron CycE - chr2L 15730995 intron CycE - chr2L_4_15730001 chr2L_15730001 RAL-802_95b 226 chr2L 15956022 15956048 chr2L 15957499 15957510 hobo 8 1482 5.5 2.5 4.0 1.6 1488 chr2L 15956022 intron beat-Ib - chr2L 15956766 intron beat-Ib - chr2L 15957510 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-802_95b 227 chr2L 16001470 16001491 chr2L 16001553 16001599 7 103 0.5 0.5 0.5 4.7 129 chr2L 16001470 intron beat-Ic + chr2L 16001534 intron beat-Ic + chr2L 16001599 intron beat-Ic + chr2L_7_16000001 chr2L_16000001 RAL-802_95b 228 chr2L 16141148 16141190 chr2L 16146375 16146417 copia 5 5223 0.5 1.0 0.8 2.8 5269 chr2L 16141148 intergenic not near genes chr2L 16143782 intergenic not near genes chr2L 16146417 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-802_95b 229 chr2L 16153725 16153743 chr2L 16160799 16160811 297 5 7072 2.5 2.0 2.2 1.6 7086 chr2L 16153725 intergenic not near genes chr2L 16157268 intergenic not near genes chr2L 16160811 intergenic not near genes chr2L_5_16155001 chr2L_16155001 RAL-802_95b 230 chr2L 16180986 16181027 chr2L 16181110 16181116 5 113 10.5 6.5 8.5 0.5 130 chr2L 16180986 intron Ca-alpha1D + chr2L 16181051 intron Ca-alpha1D + chr2L 16181116 intron Ca-alpha1D + chr2L_5_16180001 chr2L_16180001 RAL-802_95b 231 chr2L 16363922 16363962 chr2L 16364188 16364228 7 265 5.0 6.0 5.5 1.1 306 chr2L 16363922 intergenic not near genes chr2L 16364075 intergenic not near genes chr2L 16364228 intergenic not near genes chr2L_7_16360001 chr2L_16360001 RAL-802_95b 232 chr2L 16434088 16434126 chr2L 16434190 16434228 4 102 3.5 2.0 2.8 1.1 140 chr2L 16434088 intron CG5888 - chr2L 16434158 intron CG5888 - chr2L 16434228 intron CG5888 - chr2L_4_16430001 chr2L_16430001 RAL-802_95b 233 chr2L 16511969 16511992 chr2L 16519094 16519126 HMS-Beagle 9 7127 1.5 2.5 2.0 3.0 7157 chr2L 16511969 intron CG5953 - chr2L 16515548 intron CG5953 - chr2L 16519126 intron CG5953 - chr2L_9_16515001 chr2L_16515001 RAL-802_95b 234 chr2L 16544648 16544675 chr2L 16544730 16544767 4 89 7.0 10.5 8.8 0.4 119 chr2L 16544648 intergenic CG42389 + chr2L 16544708 intergenic CG42389 + chr2L 16544767 intergenic CG42389 + chr2L_4_16540001 chr2L_16540001 RAL-802_95b 235 chr2L 16585776 16585809 chr2L 16585880 16585903 7 103 6.5 7.0 6.8 0.9 127 chr2L 16585776 intron CG42389 + chr2L 16585840 intron CG42389 + chr2L 16585903 intron CG42389 + chr2L_7_16585001 chr2L_16585001 RAL-802_95b 236 chr2L 16629314 16629353 chr2L 16629414 16629467 4 98 1.5 0.5 1.0 2.0 153 chr2L 16629314 intron CG42389 + chr2L 16629390 intron CG42389 + chr2L 16629467 intron CG42389 + chr2L_4_16625001 chr2L_16625001 RAL-802_95b 237 chr2L 16696883 16696912 chr2L 16697218 16697249 5 337 4.5 4.0 4.2 1.0 366 chr2L 16696883 intron grp + chr2L 16697066 intron grp + chr2L 16697249 intron grp + chr2L_5_16695001 chr2L_16695001 RAL-802_95b 238 chr2L 16716937 16716975 chr2L 16717069 16717112 4 136 9.0 7.0 8.0 0.4 175 chr2L 16716937 intron Cyt-c-d + chr2L 16717024 intron Cyt-c-d + chr2L 16717112 intron Cyt-c-d + chr2L_4_16715001 chr2L_16715001 RAL-802_95b 239 chr2L 16796077 16796102 chr2L 16796193 16796223 6 115 4.5 9.0 6.8 0.8 146 chr2L 16796077 intergenic Ugt36Ba + chr2L 16796150 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796223 intergenic Ugt36Ba +,Ugt36Bb + chr2L_6_16795001 chr2L_16795001 RAL-802_95b 240 chr2L 16852728 16852742 chr2L 16859707 16859721 Doc4-element 4 6979 15.0 7.0 11.0 0.3 6993 chr2L 16852728 intergenic CG31810 - chr2L 16856224 intron CG31809 - chr2L 16859721 intergenic CG6012 - chr2L_4_16855001 chr2L_16855001 RAL-802_95b 241 chr2L 16867019 16867042 chr2L 16867124 16867147 4 110 1.5 3.0 2.2 1.2 128 chr2L 16867019 intergenic not near genes chr2L 16867083 intergenic not near genes chr2L 16867147 intergenic not near genes chr2L_4_16865001 chr2L_16865001 RAL-802_95b 242 chr2L 16958088 16958135 chr2L 16962896 16962943 Doc 10 4806 0.5 3.0 1.8 3.6 4855 chr2L 16958088 intergenic not near genes chr2L 16960516 intergenic not near genes chr2L 16962943 intergenic not near genes chr2L_10_16960001 chr2L_16960001 RAL-802_95b 243 chr2L 17167547 17167595 chr2L 17167807 17167856 pogo 10 257 2.0 0.5 1.2 4.5 309 chr2L 17167547 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167856 intron,intron CG34106 +,beat-IIIa + chr2L_10_17165001 chr2L_17165001 RAL-802_95b 244 chr2L 17199142 17199175 chr2L 17200629 17200662 hobo 10 1485 4.5 3.0 3.8 2.1 1520 chr2L 17199142 intron beat-IIIc - chr2L 17199902 intron beat-IIIc - chr2L 17200662 intron beat-IIIc - chr2L_10_17195001 chr2L_17195001 RAL-802_95b 245 chr2L 17327920 17327928 chr2L 17327994 17327994 4 88 2.0 1.5 1.8 1.4 74 chr2L 17327920 intergenic not near genes chr2L 17327957 intergenic not near genes chr2L 17327994 intergenic not near genes chr2L_4_17325001 chr2L_17325001 RAL-802_95b 246 chr2L 17386009 17386026 chr2L 17386110 17386127 8 100 7.5 7.0 7.2 1.0 118 chr2L 17386009 intron CLIP-190 + chr2L 17386068 intron CLIP-190 + chr2L 17386127 intron CLIP-190 + chr2L_8_17385001 chr2L_17385001 RAL-802_95b 247 chr2L 17386030 17386036 chr2L 17386103 17386121 4 88 6.0 7.0 6.5 0.5 91 chr2L 17386030 intron CLIP-190 + chr2L 17386076 intron CLIP-190 + chr2L 17386121 intron CLIP-190 + chr2L_4_17385001 chr2L_17385001 RAL-802_95b 248 chr2L 17424688 17424737 chr2L 17424820 17424869 5 129 6.5 6.5 6.5 0.7 181 chr2L 17424688 intron Dif - chr2L 17424778 intron Dif - chr2L 17424869 intron Dif - chr2L_5_17420001 chr2L_17420001 RAL-802_95b 249 chr2L 17425753 17425769 chr2L 17425900 17425916 8 146 10.0 5.0 7.5 0.9 163 chr2L 17425753 intron Dif - chr2L 17425834 intron Dif - chr2L 17425916 intron Dif - chr2L_8_17425001 chr2L_17425001 RAL-802_95b 250 chr2L 17577712 17577738 chr2L 17577808 17577834 7 94 5.5 6.5 6.0 1.0 122 chr2L 17577712 intergenic not near genes chr2L 17577773 intergenic not near genes chr2L 17577834 intergenic not near genes chr2L_7_17575001 chr2L_17575001 RAL-802_95b 251 chr2L 17723792 17723801 chr2L 17723886 17723899 5 106 1.0 3.5 2.2 1.6 107 chr2L 17723792 intron CadN - chr2L 17723846 intron CadN - chr2L 17723899 intron CadN - chr2L_5_17720001 chr2L_17720001 RAL-802_95b 252 chr2L 17819906 17819922 chr2L 17825129 17825145 copia 4 5221 4.0 1.5 2.8 1.1 5239 chr2L 17819906 intron CadN2 - chr2L 17822526 intron CadN2 - chr2L 17825145 intron CadN2 - chr2L_4_17820001 chr2L_17820001 RAL-802_95b 253 chr2L 17879995 17880028 chr2L 17880102 17880135 4 103 0.0 3.0 1.5 1.6 140 chr2L 17879995 intergenic not near genes chr2L 17880065 intergenic not near genes chr2L 17880135 intergenic not near genes chr2L_4_17880001 chr2L_17880001 RAL-802_95b 254 chr2L 17938693 17938720 chr2L 17938779 17938825 4 87 0.5 2.0 1.2 1.8 132 chr2L 17938693 intergenic CR44399 - chr2L 17938759 intergenic CR44399 - chr2L 17938825 intergenic CR44399 - chr2L_4_17935001 chr2L_17935001 RAL-802_95b 255 chr2L 17943887 17944138 chr2L 17944005 17944211 9 109 3.5 1.0 2.2 2.8 324 chr2L 17943887 intergenic not near genes chr2L 17944049 intergenic not near genes chr2L 17944211 intergenic not near genes chr2L_9_17940001 chr2L_17940001 RAL-802_95b 256 chr2L 17951926 17951977 chr2L 17953413 17953464 hobo 18 1484 2.0 1.5 1.8 6.4 1538 chr2L 17951926 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953464 intergenic not near genes chr2L_18_17950001 chr2L_17950001 RAL-802_95b 257 chr2L 18044258 18044277 chr2L 18044588 18044625 6 339 1.0 7.5 4.2 1.2 367 chr2L 18044258 intron rdo + chr2L 18044442 intron rdo + chr2L 18044625 intron rdo + chr2L_6_18040001 chr2L_18040001 RAL-802_95b 258 chr2L 18051886 18051897 chr2L 18061023 18061064 roo 4 9155 3.0 2.5 2.8 1.1 9178 chr2L 18051886 intron rdo + chr2L 18056475 intron rdo + chr2L 18061064 intron rdo + chr2L_4_18055001 chr2L_18055001 RAL-802_95b 259 chr2L 18125633 18125647 chr2L 18125740 18125754 4 107 13.5 15.0 14.2 0.3 121 chr2L 18125633 intron,5` UTR CG5758 +,CG31785 - chr2L 18125694 intron,5` UTR CG5758 +,CG31785 - chr2L 18125754 intron CG5758 + chr2L_4_18125001 chr2L_18125001 RAL-802_95b 260 chr2L 18184981 18185024 chr2L 18185119 18185162 8 138 5.0 6.0 5.5 1.2 181 chr2L 18184981 intron,5` UTR CG42750 -,CG7180 - chr2L 18185072 intron CG42750 - chr2L 18185162 intron,3` UTR CG42750 -,CR44900 - chr2L_8_18185001 chr2L_18185001 RAL-802_95b 261 chr2L 18264042 18264073 chr2L 18264139 18264170 4 97 5.5 4.0 4.8 0.7 128 chr2L 18264042 intron CG42750 - chr2L 18264106 intron CG42750 - chr2L 18264170 intron CG42750 - chr2L_4_18260001 chr2L_18260001 RAL-802_95b 262 chr2L 18282648 18282659 chr2L 18282740 18282771 4 107 9.5 6.0 7.8 0.5 123 chr2L 18282648 intergenic not near genes chr2L 18282710 intergenic not near genes chr2L 18282771 intergenic not near genes chr2L_4_18280001 chr2L_18280001 RAL-802_95b 263 chr2L 18329926 18329943 chr2L 18330062 18330070 4 134 4.0 7.5 5.8 0.6 144 chr2L 18329926 intron Fas3 + chr2L 18329998 intron Fas3 + chr2L 18330070 intron Fas3 + chr2L_4_18330001 chr2L_18330001 RAL-802_95b 264 chr2L 18394388 18394426 chr2L 18394481 18394503 6 88 4.5 3.0 3.8 1.2 115 chr2L 18394388 intergenic not near genes chr2L 18394446 intergenic not near genes chr2L 18394503 intergenic not near genes chr2L_6_18390001 chr2L_18390001 RAL-802_95b 265 chr2L 18561537 18561580 chr2L 18561658 18561701 7 119 1.5 2.0 1.8 2.5 164 chr2L 18561537 intron Pde11 - chr2L 18561619 intron Pde11 - chr2L 18561701 intron Pde11 - chr2L_7_18560001 chr2L_18560001 RAL-802_95b 266 chr2L 18811387 18811419 chr2L 18811489 18811521 4 102 6.0 0.0 3.0 1.0 134 chr2L 18811387 intergenic CG10570 -,CG42502 - chr2L 18811454 intergenic CG10570 -,CG42502 - chr2L 18811521 intergenic not near genes chr2L_4_18810001 chr2L_18810001 RAL-802_95b 267 chr2L 18812560 18812576 chr2L 18812822 18812859 5 279 0.5 1.0 0.8 2.8 299 chr2L 18812560 intergenic CG17325 +,CG42305 + chr2L 18812710 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812859 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_5_18810001 chr2L_18810001 RAL-802_95b 268 chr2L 18902608 18902655 chr2L 18902909 18902956 9 300 1.5 2.5 2.0 3.0 348 chr2L 18902608 intergenic not near genes chr2L 18902782 intergenic not near genes chr2L 18902956 intergenic not near genes chr2L_9_18900001 chr2L_18900001 RAL-802_95b 269 chr2L 19121023 19121063 chr2L 19121120 19121160 5 97 6.0 5.5 5.8 0.7 137 chr2L 19121023 intergenic l(2)37Cc - chr2L 19121092 intergenic l(2)37Cc - chr2L 19121160 intergenic l(2)37Cc - chr2L_5_19120001 chr2L_19120001 RAL-802_95b 270 chr2L 19189947 19189982 chr2L 19190121 19190156 5 174 4.0 1.5 2.8 1.3 209 chr2L 19189947 intergenic pigeon +,drl + chr2L 19190052 intergenic pigeon +,drl + chr2L 19190156 intergenic drl +,pigeon + chr2L_5_19190001 chr2L_19190001 RAL-802_95b 271 chr2L 19241070 19241087 chr2L 19241163 19241185 5 97 5.0 7.0 6.0 0.7 115 chr2L 19241070 intergenic not near genes chr2L 19241128 intergenic not near genes chr2L 19241185 intergenic not near genes chr2L_5_19240001 chr2L_19240001 RAL-802_95b 272 chr2L 19305592 19305607 chr2L 19305718 19305732 4 126 6.0 2.0 4.0 0.8 140 chr2L 19305592 intergenic not near genes chr2L 19305662 intergenic not near genes chr2L 19305732 intergenic not near genes chr2L_4_19305001 chr2L_19305001 RAL-802_95b 273 chr2L 19357526 19357567 chr2L 19357636 19357666 8 109 4.5 3.5 4.0 1.6 140 chr2L 19357526 intron dnt - chr2L 19357596 intron dnt - chr2L 19357666 intron dnt - chr2L_8_19355001 chr2L_19355001 RAL-802_95b 274 chr2L 19372704 19372744 chr2L 19372806 19372846 4 102 14.0 15.0 14.5 0.3 142 chr2L 19372704 3` UTR CG17349 + chr2L 19372775 intergenic CG17349 + chr2L 19372846 intergenic CG17349 + chr2L_4_19370001 chr2L_19370001 RAL-802_95b 275 chr2L 19380496 19380526 chr2L 19380595 19380626 4 96 10.5 10.5 10.5 0.3 130 chr2L 19380496 intergenic CG17350 + chr2L 19380561 intergenic CG17350 + chr2L 19380626 intergenic CG17350 + chr2L_4_19380001 chr2L_19380001 RAL-802_95b 276 chr2L 19405606 19405638 chr2L 19405711 19405748 10 106 5.0 1.5 3.2 2.4 142 chr2L 19405606 intron Pax - chr2L 19405677 intron Pax - chr2L 19405748 intron Pax - chr2L_10_19405001 chr2L_19405001 RAL-802_95b 277 chr2L 19543108 19543157 chr2L 19543212 19543261 12 98 3.0 2.5 2.8 3.2 153 chr2L 19543108 intron ref(2)P + chr2L 19543184 intron ref(2)P + chr2L 19543261 intron ref(2)P + chr2L_12_19540001 chr2L_19540001 RAL-802_95b 278 chr2L 19562530 19562560 chr2L 19562610 19562635 6 90 1.0 2.0 1.5 2.4 105 chr2L 19562530 exon Tep5 + chr2L 19562582 intron Tep5 + chr2L 19562635 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-802_95b 279 chr2L 19601549 19601600 chr2L 19601646 19601697 11 93 3.5 4.5 4.0 2.2 148 chr2L 19601549 intron,intron Lar +,CR44978 - chr2L 19601623 intron,intron Lar +,CR44978 - chr2L 19601697 intron,intron Lar +,CR44978 - chr2L_11_19600001 chr2L_19600001 RAL-802_95b 280 chr2L 19652563 19652584 chr2L 19674004 19674028 opus 4 21448 5.5 2.0 3.8 0.8 21465 chr2L 19652563 intron Lar + chr2L 19663296 intron Lar + chr2L 19674028 intron Lar + chr2L_4_19660001 chr2L_19660001 RAL-802_95b 281 chr2L 19703523 19703560 chr2L 19712679 19712705 roo 8 9150 5.5 0.5 3.0 2.0 9182 chr2L 19703523 intron Lar + chr2L 19708114 intron Lar + chr2L 19712705 intron Lar + chr2L_8_19705001 chr2L_19705001 RAL-802_95b 282 chr2L 19712693 19712711 chr2L 19712792 19712810 4 95 2.5 3.5 3.0 1.0 117 chr2L 19712693 intron Lar + chr2L 19712752 intron Lar + chr2L 19712810 intron Lar + chr2L_4_19710001 chr2L_19710001 RAL-802_95b 283 chr2L 19762817 19762837 chr2L 19763079 19763089 pogo 4 258 0.0 6.5 3.2 1.0 272 chr2L 19762817 intron fbp - chr2L 19762953 intron fbp - chr2L 19763089 intron fbp - chr2L_4_19760001 chr2L_19760001 RAL-802_95b 284 chr2L 19773149 19773188 chr2L 19773256 19773295 7 106 7.0 6.0 6.5 0.9 146 chr2L 19773149 intergenic not near genes chr2L 19773222 intergenic not near genes chr2L 19773295 intergenic not near genes chr2L_7_19770001 chr2L_19770001 RAL-802_95b 285 chr2L 19874233 19874250 chr2L 19874601 19874618 4 366 1.5 3.0 2.2 1.2 385 chr2L 19874233 intron sick + chr2L 19874426 intron sick + chr2L 19874618 intron sick + chr2L_4_19870001 chr2L_19870001 RAL-802_95b 286 chr2L 19972194 19972241 chr2L 19972336 19972373 9 139 3.5 5.0 4.2 1.7 179 chr2L 19972194 intron CG43861 - chr2L 19972284 intron CG43861 - chr2L 19972373 intron CG43861 - chr2L_9_19970001 chr2L_19970001 RAL-802_95b 287 chr2L 20005873 20005904 chr2L 20010959 20011000 flea 7 5094 0.5 2.5 1.5 2.8 5127 chr2L 20005873 intron CG43861 - chr2L 20008436 intron CG43861 - chr2L 20011000 intron CG43861 - chr2L_7_20005001 chr2L_20005001 RAL-802_95b 288 chr2L 20013872 20013915 chr2L 20013975 20014018 10 98 10.5 7.0 8.8 1.0 146 chr2L 20013872 intron CG43861 - chr2L 20013945 intron CG43861 - chr2L 20014018 intron CG43861 - chr2L_10_20010001 chr2L_20010001 RAL-802_95b 289 chr2L 20079495 20079544 chr2L 20079636 20079665 9 139 9.0 4.0 6.5 1.2 170 chr2L 20079495 intron,intron neb +,fok - chr2L 20079580 intron,intron neb +,fok - chr2L 20079665 intron,intron neb +,fok - chr2L_9_20075001 chr2L_20075001 RAL-802_95b 290 chr2L 20085460 20085499 chr2L 20085557 20085585 5 94 4.5 5.5 5.0 0.8 125 chr2L 20085460 intron neb + chr2L 20085522 intron neb + chr2L 20085585 intron neb + chr2L_5_20085001 chr2L_20085001 RAL-802_95b 291 chr2L 20236502 20236524 chr2L 20236598 20236620 4 96 9.0 11.0 10.0 0.4 118 chr2L 20236502 intergenic not near genes chr2L 20236561 intergenic not near genes chr2L 20236620 intergenic not near genes chr2L_4_20235001 chr2L_20235001 RAL-802_95b 292 chr2L 20272105 20272138 chr2L 20282836 20282869 copia 11 10729 3.5 6.0 4.8 1.9 10764 chr2L 20272105 intergenic not near genes chr2L 20277487 intergenic not near genes chr2L 20282869 intergenic not near genes chr2L_11_20275001 chr2L_20275001 RAL-802_95b 293 chr2L 20372212 20372246 chr2L 20372480 20372507 pogo 7 262 0.5 4.0 2.2 2.2 295 chr2L 20372212 intergenic Ugt37a1 - chr2L 20372360 intergenic Ugt37a1 - chr2L 20372507 exon Ugt37a1 - chr2L_7_20370001 chr2L_20370001 RAL-802_95b 294 chr2L 20498668 20498703 chr2L 20498787 20498802 7 110 2.0 4.5 3.2 1.7 134 chr2L 20498668 intergenic not near genes chr2L 20498735 intergenic not near genes chr2L 20498802 intergenic not near genes chr2L_7_20495001 chr2L_20495001 RAL-802_95b 295 chr2L 20553167 20553218 chr2L 20553263 20553314 9 93 2.0 2.5 2.2 2.8 147 chr2L 20553167 intergenic not near genes chr2L 20553240 intergenic not near genes chr2L 20553314 intergenic not near genes chr2L_9_20550001 chr2L_20550001 RAL-802_95b 296 chr2L 20568657 20568666 chr2L 20569067 20569076 X-element 4 408 2.0 2.0 2.0 1.3 419 chr2L 20568657 intron CR45347 + chr2L 20568866 intron CR45347 + chr2L 20569076 intron CR45347 + chr2L_4_20565001 chr2L_20565001 RAL-802_95b 297 chr2L 20576207 20576231 chr2L 20583689 20583719 blood 6 7483 5.5 2.5 4.0 1.2 7512 chr2L 20576207 intergenic CR45347 + chr2L 20579963 intergenic not near genes chr2L 20583719 3` UTR CR44909 - chr2L_6_20575001 chr2L_20575001 RAL-802_95b 298 chr2L 20601767 20601813 chr2L 20601865 20601895 8 96 2.5 0.0 1.2 3.6 128 chr2L 20601767 intron CR44909 - chr2L 20601831 intron CR44909 - chr2L 20601895 intron CR44909 - chr2L_8_20600001 chr2L_20600001 RAL-802_95b 299 chr2L 20602714 20602748 chr2L 20602822 20602856 5 108 0.0 0.0 0.0 5.0 142 chr2L 20602714 intron CR44909 - chr2L 20602785 intron CR44909 - chr2L 20602856 intron CR44909 - chr2L_5_20600001 chr2L_20600001 RAL-802_95b 300 chr2L 20668667 20668720 chr2L 20668763 20668810 10 90 7.5 5.5 6.5 1.3 143 chr2L 20668667 intron CG31678 - chr2L 20668738 intron CG31678 - chr2L 20668810 intron CG31678 - chr2L_10_20665001 chr2L_20665001 RAL-802_95b 301 chr2L 20695621 20695659 chr2L 20695753 20695791 8 132 6.5 5.0 5.8 1.2 170 chr2L 20695621 intron Hr38 - chr2L 20695706 intron Hr38 - chr2L 20695791 intron Hr38 - chr2L_8_20695001 chr2L_20695001 RAL-802_95b 302 chr2L 20835791 20835840 chr2L 20836528 20836577 Quasimodo 9 736 2.0 2.0 2.0 3.0 786 chr2L 20835791 5` UTR Oseg5 - chr2L 20836184 intergenic Oseg5 -,Spn38F - chr2L 20836577 intergenic Spn38F - chr2L_9_20835001 chr2L_20835001 RAL-802_95b 303 chr2L 20891530 20891537 chr2L 20896644 20896658 jockey 4 5119 4.5 5.0 4.8 0.7 5128 chr2L 20891530 intron,intron CG43739 -,sky - chr2L 20894094 intron,intron CG43739 -,sky - chr2L 20896658 intron,intron CG43739 -,sky - chr2L_4_20890001 chr2L_20890001 RAL-802_95b 304 chr2L 20901480 20901489 chr2L 20902619 20902622 1360 4 1144 0.5 0.5 0.5 2.7 1142 chr2L 20901480 intron,intron CG43739 -,sky - chr2L 20902051 intron,intron CG43739 -,sky - chr2L 20902622 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-802_95b 305 chr2L 20946924 20946958 chr2L 20947031 20947062 5 105 3.0 2.0 2.5 1.4 138 chr2L 20946924 intergenic CR44606 - chr2L 20946993 intergenic CR44606 - chr2L 20947062 intergenic CR44606 - chr2L_5_20945001 chr2L_20945001 RAL-802_95b 306 chr2L 20967076 20967101 chr2L 20967176 20967201 5 99 8.5 12.0 10.2 0.4 125 chr2L 20967076 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967201 3` UTR CG42238 - chr2L_5_20965001 chr2L_20965001 RAL-802_95b 307 chr2L 20976645 20976664 chr2L 20981475 20981499 X-element 4 4834 1.5 3.0 2.2 1.2 4854 chr2L 20976645 intron CG42238 - chr2L 20979072 intron CG42238 - chr2L 20981499 intron CG42238 - chr2L_4_20975001 chr2L_20975001 RAL-802_95b 308 chr2L 20984721 20984758 chr2L 20984832 20984870 6 109 3.5 5.0 4.2 1.2 149 chr2L 20984721 intron CG42238 - chr2L 20984796 intron CG42238 - chr2L 20984870 intron CG42238 - chr2L_6_20980001 chr2L_20980001 RAL-802_95b 309 chr2L 21020280 21020298 chr2L 21023952 21023969 NOF 6 3678 3.0 1.0 2.0 2.0 3689 chr2L 21020280 intron CG42238 - chr2L 21022124 intron CG42238 - chr2L 21023969 intron CG42238 - chr2L_6_21020001 chr2L_21020001 RAL-802_95b 310 chr2L 21113666 21113687 chr2L 21113779 21113800 4 113 6.5 3.5 5.0 0.7 134 chr2L 21113666 intron Nhe2 + chr2L 21113733 intron Nhe2 + chr2L 21113800 intron Nhe2 + chr2L_4_21110001 chr2L_21110001 RAL-802_95b 311 chr2L 21113690 21113718 chr2L 21113778 21113804 10 105 2.5 3.0 2.8 2.6 114 chr2L 21113690 intron Nhe2 + chr2L 21113747 intron Nhe2 + chr2L 21113804 intron Nhe2 + chr2L_10_21110001 chr2L_21110001 RAL-802_95b 312 chr2L 21124521 21124546 chr2L 21124627 21124632 6 103 5.5 11.5 8.5 0.6 111 chr2L 21124521 exon Nhe2 + chr2L 21124576 intron Nhe2 + chr2L 21124632 intron Nhe2 + chr2L_6_21120001 chr2L_21120001 RAL-802_95b 313 chr2L 21124547 21124558 chr2L 21124618 21124664 4 95 4.5 11.5 8.0 0.4 117 chr2L 21124547 intron Nhe2 + chr2L 21124606 intron Nhe2 + chr2L 21124664 intron Nhe2 + chr2L_4_21120001 chr2L_21120001 RAL-802_95b 314 chr2L 21233949 21233993 chr2L 21234066 21234110 10 114 4.0 7.5 5.8 1.5 161 chr2L 21233949 intron,5` UTR CG31626 -,CR45713 + chr2L 21234030 intron,5` UTR CG31626 -,CR45713 + chr2L 21234110 intron CG31626 - chr2L_10_21230001 chr2L_21230001 RAL-802_95b 315 chr2L 21286591 21286623 chr2L 21286689 21286721 8 96 5.0 4.0 4.5 1.5 130 chr2L 21286591 exon Mio - chr2L 21286656 intron Mio - chr2L 21286721 intron Mio - chr2L_8_21285001 chr2L_21285001 RAL-802_95b 316 chr2L 21315784 21315822 chr2L 21315882 21315895 4 88 16.0 14.5 15.2 0.2 111 chr2L 21315784 intron crc + chr2L 21315840 intron crc + chr2L 21315895 intron crc + chr2L_4_21315001 chr2L_21315001 RAL-802_95b 317 chr2L 21347533 21347579 chr2L 21355025 21355070 blood 9 7482 2.5 3.5 3.0 2.2 7537 chr2L 21347533 intron Tsp39D + chr2L 21351302 intron Tsp39D + chr2L 21355070 intron Tsp39D + chr2L_9_21350001 chr2L_21350001 RAL-802_95b 318 chr2L 21373368 21373415 chr2L 21373490 21373531 6 120 5.5 4.5 5.0 1.0 163 chr2L 21373368 intron CG8665 + chr2L 21373450 intron CG8665 + chr2L 21373531 intron CG8665 + chr2L_6_21370001 chr2L_21370001 RAL-802_95b 319 chr2L 21691809 21691838 chr2L 21698299 21698309 Burdock 5 6485 5.0 0.0 2.5 1.4 6500 chr2L 21691809 intron CG31619 + chr2L 21695059 intron CG31619 + chr2L 21698309 intron CG31619 + chr2L_5_21695001 chr2L_21695001 RAL-802_95b 320 chr2L 21745247 21745280 chr2L 21745357 21745390 9 108 4.0 3.5 3.8 1.9 143 chr2L 21745247 intron step - chr2L 21745318 intron step - chr2L 21745390 intron step - chr2L_9_21745001 chr2L_21745001 RAL-802_95b 321 chr2L 21747650 21747668 chr2L 21747824 21747839 4 175 8.5 5.5 7.0 0.5 189 chr2L 21747650 intron step - chr2L 21747744 intron step - chr2L 21747839 intron step - chr2L_4_21745001 chr2L_21745001 RAL-802_95b 322 chr2L 21750099 21750133 chr2L 21750433 21750471 4 331 8.0 14.5 11.2 0.3 372 chr2L 21750099 intron step - chr2L 21750285 intron step - chr2L 21750471 intron step - chr2L_4_21750001 chr2L_21750001 RAL-802_95b 323 chr2L 21755485 21755521 chr2L 21755629 21755665 10 141 5.5 4.5 5.0 1.7 180 chr2L 21755485 intron step - chr2L 21755575 intron step - chr2L 21755665 intron step - chr2L_10_21755001 chr2L_21755001 RAL-802_95b 324 chr2L 21771219 21771231 chr2L 21771346 21771353 7 126 6.0 2.5 4.2 1.3 134 chr2L 21771219 intron CG31612 - chr2L 21771286 intron CG31612 - chr2L 21771353 intron CG31612 - chr2L_7_21770001 chr2L_21770001 RAL-802_95b 325 chr2L 21771238 21771261 chr2L 21771345 21771368 7 108 4.0 2.5 3.2 1.7 130 chr2L 21771238 intron CG31612 - chr2L 21771303 intron CG31612 - chr2L 21771368 intron CG31612 - chr2L_7_21770001 chr2L_21770001 RAL-802_95b 326 chr2L 21825132 21825160 chr2L 21825586 21825614 5 450 7.0 3.0 5.0 0.8 482 chr2L 21825132 intergenic not near genes chr2L 21825373 intergenic not near genes chr2L 21825614 intergenic not near genes chr2L_5_21825001 chr2L_21825001 RAL-802_95b 327 chr2L 21981670 21981709 chr2L 21990855 21990885 roo 7 9179 3.5 3.0 3.2 1.7 9215 chr2L 21981670 exon CG2528 - chr2L 21986278 intron CG2528 - chr2L 21990885 exon CG2528 - chr2L_7_21985001 chr2L_21985001 RAL-802_95b 328 chr2L 21996923 21996973 chr2L 21997023 21997074 7 98 9.0 7.5 8.2 0.8 151 chr2L 21996923 intergenic not near genes chr2L 21996998 intergenic not near genes chr2L 21997074 intergenic not near genes chr2L_7_21995001 chr2L_21995001 RAL-802_95b 329 chr2L 22191848 22192043 chr2L 22191939 22192126 5 100 5.0 8.5 6.8 0.6 278 chr2L 22191848 intron Ir40a - chr2L 22191987 intron Ir40a - chr2L 22192126 intron Ir40a - chr2L_5_22190001 chr2L_22190001 RAL-802_95b 330 chr2L 22258605 22258633 chr2L 22260749 22260751 G6 8 2140 4.5 4.0 4.2 1.5 2146 chr2L 22258605 intergenic Tif-IA + chr2L 22259678 intergenic not near genes chr2L 22260751 intergenic not near genes chr2L_8_22255001 chr2L_22255001 RAL-802_95b 331 chr2L 22294348 22294380 chr2L 22294451 22294488 6 107 3.5 5.5 4.5 1.1 140 chr2L 22294348 intergenic not near genes chr2L 22294418 intergenic not near genes chr2L 22294488 intergenic not near genes chr2L_6_22290001 chr2L_22290001 RAL-802_95b 332 chr2L 22326655 22326687 chr2L 22326757 22326789 5 100 3.5 4.5 4.0 1.0 134 chr2L 22326655 intron CG17018 + chr2L 22326722 intron CG17018 + chr2L 22326789 intron CG17018 + chr2L_5_22325001 chr2L_22325001 RAL-802_95b 333 chr2L 22545957 22545978 chr2L 22546073 22546094 4 116 6.0 2.5 4.2 0.8 137 chr2L 22545957 intron CG17490 + chr2L 22546026 intron CG17490 + chr2L 22546094 intron CG17490 + chr2L_4_22545001 chr2L_22545001 RAL-802_95b 334 chr2L 22548548 22548570 chr2L 22548655 22548680 9 107 3.5 5.5 4.5 1.6 132 chr2L 22548548 intergenic CG17490 + chr2L 22548614 intergenic CG17490 + chr2L 22548680 intergenic CG17490 + chr2L_9_22545001 chr2L_22545001 RAL-802_95b 335 chr2L 22581963 22581996 chr2L 22583772 22583784 S-element 5 1805 2.5 2.0 2.2 1.6 1821 chr2L 22581963 intron CG17494 + chr2L 22582874 intron CG17494 + chr2L 22583784 intron CG17494 + chr2L_5_22580001 chr2L_22580001 RAL-802_95b 336 chr2L 22600110 22600119 chr2L 22600215 22600246 4 115 1.5 2.0 1.8 1.4 136 chr2L 22600110 intergenic not near genes chr2L 22600178 intergenic not near genes chr2L 22600246 intergenic not near genes chr2L_4_22600001 chr2L_22600001 RAL-802_95b 337 chr2L 22776405 22776443 chr2L 22778214 22778252 S-element 9 1809 5.5 3.0 4.2 1.7 1847 chr2L 22776405 intergenic not near genes chr2L 22777328 intergenic not near genes chr2L 22778252 intergenic not near genes chr2L_9_22775001 chr2L_22775001 RAL-802_95b 338 chr2R 1441366 1441379 chr2R 1441499 1441512 4 133 3.5 3.5 3.5 0.9 146 chr2R 1441366 intron l(2)41Ab + chr2R 1441439 intron l(2)41Ab + chr2R 1441512 intron l(2)41Ab + chr2R_4_1440001 chr2R_1440001 RAL-802_95b 339 chr2R 1516590 1516603 chr2R 1521338 1521351 1731 6 4748 20.5 8.5 14.5 0.4 4761 chr2R 1516590 exon Maf1 - chr2R 1518970 intron Maf1 - chr2R 1521351 5` UTR Maf1 - chr2R_6_1515001 chr2R_1515001 RAL-802_95b 340 chr2R 1779308 1779353 chr2R 1779406 1779431 6 94 2.0 1.5 1.8 2.1 123 chr2R 1779308 intergenic CG41520 + chr2R 1779370 intergenic CG41520 + chr2R 1779431 intergenic CG41520 + chr2R_6_1775001 chr2R_1775001 RAL-802_95b 341 chr2R 2498968 2499015 chr2R 2508135 2508182 roo 10 9163 1.0 3.0 2.0 3.3 9214 chr2R 2498968 intron MFS17 - chr2R 2503575 intron MFS17 - chr2R 2508182 intron MFS17 - chr2R_10_2500001 chr2R_2500001 RAL-802_95b 342 chr2R 1373059 1373065 chr2R 2589337 2589343 Cr1a 4 1216278 13.0 11.0 12.0 0.3 1216284 chr2R 1373059 intron l(2)41Ab + chr2R 1981201 intron CG17684 - chr2R 2589343 intergenic not near genes chr2R_4_1980001 chr2R_1980001 RAL-802_95b 343 chr2R 3291923 3292102 chr2R 3915100 3915278 4 623173 2.0 14.5 8.2 0.4 623355 chr2R 3291923 intergenic not near genes chr2R 3603600 intergenic not near genes chr2R 3915278 intron uex - chr2R_4_3600001 chr2R_3600001 RAL-802_95b 344 chr2R 4312942 4312961 chr2R 4313046 4313065 4 104 7.0 7.5 7.2 0.5 123 chr2R 4312942 intergenic not near genes chr2R 4313004 intergenic not near genes chr2R 4313065 intergenic not near genes chr2R_4_4310001 chr2R_4310001 RAL-802_95b 345 chr2R 4375856 4375858 chr2R 4375949 4375957 4 96 10.5 5.0 7.8 0.5 101 chr2R 4375856 intron Gprk1 - chr2R 4375906 intron Gprk1 - chr2R 4375957 intron Gprk1 - chr2R_4_4375001 chr2R_4375001 RAL-802_95b 346 chr2R 4622944 4622986 chr2R 4624112 4624149 1360 6 1158 0.5 3.5 2.0 2.0 1205 chr2R 4622944 intergenic CR44101 - chr2R 4623546 intergenic not near genes chr2R 4624149 intergenic not near genes chr2R_6_4620001 chr2R_4620001 RAL-802_95b 347 chr2R 4688098 4688132 chr2R 4688206 4688229 6 108 1.5 5.5 3.5 1.3 131 chr2R 4688098 intergenic not near genes chr2R 4688164 intergenic not near genes chr2R 4688229 intergenic not near genes chr2R_6_4685001 chr2R_4685001 RAL-802_95b 348 chr2R 4750339 4750377 chr2R 4751503 4751523 1360 4 1162 4.0 3.0 3.5 0.9 1184 chr2R 4750339 intron conu + chr2R 4750931 intron conu + chr2R 4751523 intron conu + chr2R_4_4750001 chr2R_4750001 RAL-802_95b 349 chr2R 4821228 4821248 chr2R 4821309 4821354 4 92 7.0 4.5 5.8 0.6 126 chr2R 4821228 intron CG17528 - chr2R 4821291 intron CG17528 - chr2R 4821354 intron CG17528 - chr2R_4_4820001 chr2R_4820001 RAL-802_95b 350 chr2R 4870732 4870742 chr2R 4871256 4871273 R1A1-element 4 529 1.5 1.0 1.2 1.8 541 chr2R 4870732 intergenic not near genes chr2R 4871002 intergenic not near genes chr2R 4871273 intergenic not near genes chr2R_4_4870001 chr2R_4870001 RAL-802_95b 351 chr2R 4887607 4887629 chr2R 4887823 4887845 5 214 10.0 10.0 10.0 0.5 238 chr2R 4887607 intergenic not near genes chr2R 4887726 intergenic not near genes chr2R 4887845 intergenic not near genes chr2R_5_4885001 chr2R_4885001 RAL-802_95b 352 chr2R 5342821 5342858 chr2R 5342928 5342960 8 110 10.0 9.5 9.8 0.7 139 chr2R 5342821 intergenic not near genes chr2R 5342890 intergenic not near genes chr2R 5342960 intergenic not near genes chr2R_8_5340001 chr2R_5340001 RAL-802_95b 353 chr2R 5363496 5363517 chr2R 5363584 5363615 7 93 4.0 5.5 4.8 1.2 119 chr2R 5363496 intron CR42646 + chr2R 5363556 intron CR42646 + chr2R 5363615 intron CR42646 + chr2R_7_5360001 chr2R_5360001 RAL-802_95b 354 chr2R 5396261 5396282 chr2R 5396496 5396540 4 251 2.5 2.0 2.2 1.2 279 chr2R 5396261 intergenic not near genes chr2R 5396400 intergenic not near genes chr2R 5396540 intergenic not near genes chr2R_4_5395001 chr2R_5395001 RAL-802_95b 355 chr2R 5410300 5410314 chr2R 5410475 5410489 4 172 9.5 8.0 8.8 0.4 189 chr2R 5410300 intergenic not near genes chr2R 5410394 intergenic not near genes chr2R 5410489 intergenic not near genes chr2R_4_5410001 chr2R_5410001 RAL-802_95b 356 chr2R 5410324 5410346 chr2R 5410470 5410521 12 169 5.5 7.5 6.5 1.6 197 chr2R 5410324 intergenic not near genes chr2R 5410422 intergenic not near genes chr2R 5410521 intergenic not near genes chr2R_12_5410001 chr2R_5410001 RAL-802_95b 357 chr2R 5417977 5418027 chr2R 5420629 5420663 Burdock 12 2647 4.5 3.5 4.0 2.4 2686 chr2R 5417977 intron laccase2 + chr2R 5419320 intron laccase2 + chr2R 5420663 intron laccase2 + chr2R_12_5415001 chr2R_5415001 RAL-802_95b 358 chr2R 5437722 5437771 chr2R 5437820 5437822 6 90 8.0 9.5 8.8 0.6 100 chr2R 5437722 intron laccase2 + chr2R 5437772 intron laccase2 + chr2R 5437822 intron laccase2 + chr2R_6_5435001 chr2R_5435001 RAL-802_95b 359 chr2R 5475445 5475479 chr2R 5475719 5475763 5 281 1.5 6.5 4.0 1.0 318 chr2R 5475445 intron CG30440 - chr2R 5475604 intron CG30440 - chr2R 5475763 intron CG30440 - chr2R_5_5475001 chr2R_5475001 RAL-802_95b 360 chr2R 5509513 5509543 chr2R 5509629 5509659 6 116 2.0 2.0 2.0 2.0 146 chr2R 5509513 intron CG30438 + chr2R 5509586 intron CG30438 + chr2R 5509659 intron CG30438 + chr2R_6_5505001 chr2R_5505001 RAL-802_95b 361 chr2R 5653348 5653355 chr2R 5653467 5653474 4 119 14.5 12.5 13.5 0.3 126 chr2R 5653348 intergenic CG1344 + chr2R 5653411 intergenic CG1344 + chr2R 5653474 intergenic CG1344 + chr2R_4_5650001 chr2R_5650001 RAL-802_95b 362 chr2R 5653356 5653368 chr2R 5653459 5653487 4 115 13.5 10.5 12.0 0.3 131 chr2R 5653356 intergenic CG1344 + chr2R 5653422 intergenic CG1344 + chr2R 5653487 intergenic CG1344 + chr2R_4_5650001 chr2R_5650001 RAL-802_95b 363 chr2R 5664296 5664311 chr2R 5664361 5664403 6 84 8.0 9.5 8.8 0.6 107 chr2R 5664296 5` UTR CR45472 + chr2R 5664350 intron CR45472 + chr2R 5664403 intron CR45472 + chr2R_6_5660001 chr2R_5660001 RAL-802_95b 364 chr2R 5674590 5674601 chr2R 5674682 5674703 4 94 5.5 3.0 4.2 0.8 113 chr2R 5674590 intergenic not near genes chr2R 5674646 intergenic not near genes chr2R 5674703 intergenic not near genes chr2R_4_5670001 chr2R_5670001 RAL-802_95b 365 chr2R 5722078 5722119 chr2R 5722182 5722223 5 104 1.5 4.5 3.0 1.2 145 chr2R 5722078 intron ap - chr2R 5722150 intron ap - chr2R 5722223 intron ap - chr2R_5_5720001 chr2R_5720001 RAL-802_95b 366 chr2R 5750432 5750450 chr2R 5750544 5750555 4 110 7.5 4.5 6.0 0.6 123 chr2R 5750432 intergenic not near genes chr2R 5750494 intergenic not near genes chr2R 5750555 intergenic not near genes chr2R_4_5750001 chr2R_5750001 RAL-802_95b 367 chr2R 5779228 5779279 chr2R 5779471 5779522 5 241 7.5 16.5 12.0 0.4 294 chr2R 5779228 intron ZnT41F - chr2R 5779375 intron ZnT41F - chr2R 5779522 intron ZnT41F - chr2R_5_5775001 chr2R_5775001 RAL-802_95b 368 chr2R 5878903 5878952 chr2R 5879003 5879052 6 99 3.5 3.5 3.5 1.3 149 chr2R 5878903 intergenic CG44438 - chr2R 5878978 intergenic CG44438 - chr2R 5879052 intergenic CG44438 - chr2R_6_5875001 chr2R_5875001 RAL-802_95b 369 chr2R 5896989 5897023 chr2R 5897095 5897121 6 105 4.5 3.0 3.8 1.2 132 chr2R 5896989 intron CG43366 + chr2R 5897055 intron CG43366 + chr2R 5897121 intron CG43366 + chr2R_6_5895001 chr2R_5895001 RAL-802_95b 370 chr2R 5917750 5917785 chr2R 5917849 5917879 4 98 5.0 3.0 4.0 0.8 129 chr2R 5917750 intron CG43366 + chr2R 5917814 intron CG43366 + chr2R 5917879 intron CG43366 + chr2R_4_5915001 chr2R_5915001 RAL-802_95b 371 chr2R 5953061 5953087 chr2R 5953159 5953159 6 93 3.5 2.5 3.0 1.5 98 chr2R 5953061 intergenic not near genes chr2R 5953110 intergenic not near genes chr2R 5953159 intergenic not near genes chr2R_6_5950001 chr2R_5950001 RAL-802_95b 372 chr2R 6088355 6088385 chr2R 6088468 6088498 11 109 7.0 10.5 8.8 1.1 143 chr2R 6088355 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088498 intergenic not near genes chr2R_11_6085001 chr2R_6085001 RAL-802_95b 373 chr2R 6126935 6126964 chr2R 6127048 6127092 4 116 4.5 7.0 5.8 0.6 157 chr2R 6126935 intron EcR - chr2R 6127014 intron EcR - chr2R 6127092 intron EcR - chr2R_4_6125001 chr2R_6125001 RAL-802_95b 374 chr2R 6129308 6129357 chr2R 6129406 6129455 13 97 2.0 3.0 2.5 3.7 147 chr2R 6129308 intron EcR - chr2R 6129382 intron EcR - chr2R 6129455 intron EcR - chr2R_13_6125001 chr2R_6125001 RAL-802_95b 375 chr2R 6132472 6132507 chr2R 6132586 6132621 4 114 7.5 10.5 9.0 0.4 149 chr2R 6132472 intron EcR - chr2R 6132546 intron EcR - chr2R 6132621 intron EcR - chr2R_4_6130001 chr2R_6130001 RAL-802_95b 376 chr2R 6151507 6151529 chr2R 6151597 6151618 6 90 2.5 4.0 3.2 1.4 111 chr2R 6151507 intron EcR - chr2R 6151562 intron EcR - chr2R 6151618 intron EcR - chr2R_6_6150001 chr2R_6150001 RAL-802_95b 377 chr2R 6178103 6178141 chr2R 6178249 6178287 5 142 11.0 13.5 12.2 0.4 184 chr2R 6178103 intergenic not near genes chr2R 6178195 intergenic not near genes chr2R 6178287 intergenic not near genes chr2R_5_6175001 chr2R_6175001 RAL-802_95b 378 chr2R 6178691 6178708 chr2R 6178771 6178805 4 96 5.0 2.5 3.8 0.8 114 chr2R 6178691 intergenic not near genes chr2R 6178748 intergenic not near genes chr2R 6178805 intergenic not near genes chr2R_4_6175001 chr2R_6175001 RAL-802_95b 379 chr2R 6494517 6494552 chr2R 6499298 6499307 F-element 9 4773 0.5 2.0 1.2 4.1 4790 chr2R 6494517 intergenic not near genes chr2R 6496912 intergenic not near genes chr2R 6499307 intergenic not near genes chr2R_9_6495001 chr2R_6495001 RAL-802_95b 380 chr2R 6530760 6530793 chr2R 6530860 6530893 6 100 1.0 4.0 2.5 1.7 133 chr2R 6530760 intron jing + chr2R 6530826 intron jing + chr2R 6530893 intron jing + chr2R_6_6530001 chr2R_6530001 RAL-802_95b 381 chr2R 6551340 6551388 chr2R 6551449 6551494 6 104 9.5 9.0 9.2 0.6 154 chr2R 6551340 intron jing + chr2R 6551417 intron jing + chr2R 6551494 intron jing + chr2R_6_6550001 chr2R_6550001 RAL-802_95b 382 chr2R 6579756 6579785 chr2R 6584860 6584892 flea 6 5105 7.0 1.0 4.0 1.2 5136 chr2R 6579756 intron jing + chr2R 6582324 intron jing + chr2R 6584892 intron jing + chr2R_6_6580001 chr2R_6580001 RAL-802_95b 383 chr2R 6579787 6579797 chr2R 6584859 6584894 flea 4 5093 4.5 1.0 2.8 1.1 5107 chr2R 6579787 intron jing + chr2R 6582340 intron jing + chr2R 6584894 intron jing + chr2R_4_6580001 chr2R_6580001 RAL-802_95b 384 chr2R 6597873 6597893 chr2R 6597981 6598001 4 108 5.0 4.0 4.5 0.7 128 chr2R 6597873 intron jing + chr2R 6597937 intron jing + chr2R 6598001 intron jing + chr2R_4_6595001 chr2R_6595001 RAL-802_95b 385 chr2R 6607918 6607933 chr2R 6608039 6608055 5 120 7.0 7.5 7.2 0.6 137 chr2R 6607918 intron jing + chr2R 6607986 intron jing + chr2R 6608055 intron jing + chr2R_5_6605001 chr2R_6605001 RAL-802_95b 386 chr2R 6607938 6607953 chr2R 6608029 6608075 4 114 5.5 7.0 6.2 0.6 137 chr2R 6607938 intron jing + chr2R 6608006 intron jing + chr2R 6608075 intron jing + chr2R_4_6605001 chr2R_6605001 RAL-802_95b 387 chr2R 6633200 6633228 chr2R 6633277 6633325 4 92 6.0 9.5 7.8 0.5 125 chr2R 6633200 intergenic Vha16-1 -,Trap1 - chr2R 6633262 intergenic Vha16-1 -,Trap1 - chr2R 6633325 intergenic Vha16-1 -,Trap1 - chr2R_4_6630001 chr2R_6630001 RAL-802_95b 388 chr2R 6685885 6685893 chr2R 6685952 6685967 4 86 9.0 8.0 8.5 0.4 82 chr2R 6685885 intron,intron CG9422 +,Tdc2 - chr2R 6685926 intron,intron CG9422 +,Tdc2 - chr2R 6685967 intron,intron CG9422 +,Tdc2 - chr2R_4_6685001 chr2R_6685001 RAL-802_95b 389 chr2R 6691104 6691150 chr2R 6691203 6691239 9 97 7.0 8.5 7.8 1.0 135 chr2R 6691104 intron CG9422 + chr2R 6691172 intron CG9422 + chr2R 6691239 intron CG9422 + chr2R_9_6690001 chr2R_6690001 RAL-802_95b 390 chr2R 6699575 6699594 chr2R 6699680 6699699 7 105 8.5 7.0 7.8 0.8 124 chr2R 6699575 intergenic Rab2 + chr2R 6699637 intergenic Rab2 + chr2R 6699699 intergenic Rab2 + chr2R_7_6695001 chr2R_6695001 RAL-802_95b 391 chr2R 6699598 6699618 chr2R 6699675 6699723 6 94 5.5 7.5 6.5 0.8 125 chr2R 6699598 intergenic Rab2 + chr2R 6699660 intergenic Rab2 + chr2R 6699723 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_6_6695001 chr2R_6695001 RAL-802_95b 392 chr2R 6912825 6912856 chr2R 6913135 6913151 4 299 1.5 1.5 1.5 1.6 326 chr2R 6912825 intron CG30158 + chr2R 6912988 intron CG30158 + chr2R 6913151 intron CG30158 + chr2R_4_6910001 chr2R_6910001 RAL-802_95b 393 chr2R 6952149 6952184 chr2R 6959749 6959794 opus 7 7604 4.0 1.5 2.8 1.8 7645 chr2R 6952149 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955972 intron,intron mim -,CheB42c - chr2R 6959794 intron,intron mim -,CheB42c - chr2R_7_6955001 chr2R_6955001 RAL-802_95b 394 chr2R 7171254 7171285 chr2R 7171360 7171370 4 98 0.0 3.5 1.8 1.4 116 chr2R 7171254 intron pk + chr2R 7171312 intron pk + chr2R 7171370 intron pk + chr2R_4_7170001 chr2R_7170001 RAL-802_95b 395 chr2R 7196562 7196601 chr2R 7201356 7201396 F-element 7 4795 3.0 7.5 5.2 1.1 4834 chr2R 7196562 intron pk + chr2R 7198979 intron pk + chr2R 7201396 intron pk + chr2R_7_7195001 chr2R_7195001 RAL-802_95b 396 chr2R 7353398 7353418 chr2R 7353523 7353544 4 122 3.0 2.0 2.5 1.1 146 chr2R 7353398 intron Dscam1 - chr2R 7353471 intron Dscam1 - chr2R 7353544 intron Dscam1 - chr2R_4_7350001 chr2R_7350001 RAL-802_95b 397 chr2R 7434881 7434899 chr2R 7439202 7439220 Juan 4 4318 2.5 8.5 5.5 0.6 4339 chr2R 7434881 intergenic so + chr2R 7437050 intergenic not near genes chr2R 7439220 intergenic not near genes chr2R_4_7435001 chr2R_7435001 RAL-802_95b 398 chr2R 7459266 7459302 chr2R 7459368 7459370 7 94 2.5 3.5 3.0 1.8 104 chr2R 7459266 intergenic Inos -,CG11141 - chr2R 7459318 intergenic CG11141 -,Inos - chr2R 7459370 intergenic CG11141 -,Inos - chr2R_7_7455001 chr2R_7455001 RAL-802_95b 399 chr2R 7554115 7554132 chr2R 7554206 7554224 4 92 3.5 7.0 5.2 0.6 109 chr2R 7554115 intron Corin + chr2R 7554170 intron Corin + chr2R 7554224 intron Corin + chr2R_4_7550001 chr2R_7550001 RAL-802_95b 400 chr2R 7608386 7608435 chr2R 7613609 7613618 I-element 9 5211 0.5 0.5 0.5 6.0 5232 chr2R 7608386 intron CG1358 - chr2R 7611002 intron CG1358 - chr2R 7613618 intron CG1358 - chr2R_9_7610001 chr2R_7610001 RAL-802_95b 401 chr2R 7691997 7692038 chr2R 7692098 7692139 10 100 2.0 0.5 1.2 4.5 142 chr2R 7691997 intron CG1399 - chr2R 7692068 intron CG1399 - chr2R 7692139 intron CG1399 - chr2R_10_7690001 chr2R_7690001 RAL-802_95b 402 chr2R 7708343 7708360 chr2R 7708461 7708478 6 116 5.0 7.5 6.2 0.8 135 chr2R 7708343 intron tor - chr2R 7708410 intron tor - chr2R 7708478 intron tor - chr2R_6_7705001 chr2R_7705001 RAL-802_95b 403 chr2R 7738172 7738191 chr2R 7738268 7738288 6 96 8.5 9.5 9.0 0.6 116 chr2R 7738172 intergenic not near genes chr2R 7738230 intergenic not near genes chr2R 7738288 intergenic not near genes chr2R_6_7735001 chr2R_7735001 RAL-802_95b 404 chr2R 7769724 7769749 chr2R 7769821 7769841 5 96 8.0 8.0 8.0 0.6 117 chr2R 7769724 intron,intron CG30497 -,CG45093 - chr2R 7769782 intron,intron CG30497 -,CG45093 - chr2R 7769841 intron,intron CG30497 -,CG45093 - chr2R_5_7765001 chr2R_7765001 RAL-802_95b 405 chr2R 7815659 7815698 chr2R 7822148 7822187 Burdock 11 6487 0.5 4.0 2.2 3.4 6528 chr2R 7815659 intergenic CG1882 + chr2R 7818923 intergenic not near genes chr2R 7822187 3` UTR cathD - chr2R_11_7815001 chr2R_7815001 RAL-802_95b 406 chr2R 7861458 7861486 chr2R 7861690 7861718 4 226 9.0 14.5 11.8 0.3 260 chr2R 7861458 intron Dgk - chr2R 7861588 intron Dgk - chr2R 7861718 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-802_95b 407 chr2R 7942166 7942201 chr2R 7942277 7942311 9 109 9.0 11.5 10.2 0.8 145 chr2R 7942166 3` UTR CG14764 - chr2R 7942238 3` UTR CG14764 - chr2R 7942311 3` UTR CG14764 - chr2R_9_7940001 chr2R_7940001 RAL-802_95b 408 chr2R 8067046 8067094 chr2R 8067150 8067168 8 100 10.5 7.5 9.0 0.8 122 chr2R 8067046 intron CG17977 - chr2R 8067107 intron CG17977 - chr2R 8067168 exon CG17977 - chr2R_8_8065001 chr2R_8065001 RAL-802_95b 409 chr2R 8076660 8076709 chr2R 8076760 8076793 10 98 3.5 3.0 3.2 2.4 133 chr2R 8076660 intron lig + chr2R 8076726 intron lig + chr2R 8076793 intron lig + chr2R_10_8075001 chr2R_8075001 RAL-802_95b 410 chr2R 8187315 8187348 chr2R 8187421 8187455 7 107 8.5 7.5 8.0 0.8 140 chr2R 8187315 intron LRP1 + chr2R 8187385 intron LRP1 + chr2R 8187455 intron LRP1 + chr2R_7_8185001 chr2R_8185001 RAL-802_95b 411 chr2R 8236018 8236064 chr2R 8236119 8236154 7 96 0.5 0.5 0.5 4.7 136 chr2R 8236018 intergenic not near genes chr2R 8236086 intergenic not near genes chr2R 8236154 intergenic not near genes chr2R_7_8235001 chr2R_8235001 RAL-802_95b 412 chr2R 8252177 8252201 chr2R 8256325 8256349 4 4150 9.0 0.5 4.8 0.7 4172 chr2R 8252177 intergenic not near genes chr2R 8254263 exon CG14760 + chr2R 8256349 exon CG14760 + chr2R_4_8250001 chr2R_8250001 RAL-802_95b 413 chr2R 8330853 8330890 chr2R 8331359 8331396 roo 8 500 2.5 3.0 2.8 2.1 543 chr2R 8330853 intron pdm3 + chr2R 8331124 intron pdm3 + chr2R 8331396 intron pdm3 + chr2R_8_8330001 chr2R_8330001 RAL-802_95b 414 chr2R 8368201 8368215 chr2R 8368265 8368285 4 78 5.5 8.0 6.8 0.5 84 chr2R 8368201 intron pdm3 + chr2R 8368243 intron pdm3 + chr2R 8368285 intron pdm3 + chr2R_4_8365001 chr2R_8365001 RAL-802_95b 415 chr2R 8480936 8480973 chr2R 8481070 8481082 6 136 11.5 15.0 13.2 0.4 146 chr2R 8480936 intron mtt - chr2R 8481009 intron mtt - chr2R 8481082 intron mtt - chr2R_6_8480001 chr2R_8480001 RAL-802_95b 416 chr2R 8524971 8525104 chr2R 8525130 8525200 4 103 3.0 4.0 3.5 0.9 229 chr2R 8524971 intron mtt - chr2R 8525086 intron mtt - chr2R 8525200 intron mtt - chr2R_4_8525001 chr2R_8525001 RAL-802_95b 417 chr2R 8722742 8722794 chr2R 8723003 8723004 pogo 10 244 1.0 0.5 0.8 5.6 262 chr2R 8722742 intron CG14767 - chr2R 8722873 intron CG14767 - chr2R 8723004 intron CG14767 - chr2R_10_8720001 chr2R_8720001 RAL-802_95b 418 chr2R 8849222 8849264 chr2R 8849315 8849362 8 91 4.0 5.0 4.5 1.5 140 chr2R 8849222 intron sns + chr2R 8849292 intron sns + chr2R 8849362 intron sns + chr2R_8_8845001 chr2R_8845001 RAL-802_95b 419 chr2R 8967411 8967703 chr2R 8967578 8967831 15 163 3.5 3.5 3.5 3.3 420 chr2R 8967411 intron CG8216 - chr2R 8967621 intron CG8216 - chr2R 8967831 intron CG8216 - chr2R_15_8965001 chr2R_8965001 RAL-802_95b 420 chr2R 9047407 9047430 chr2R 9047521 9047545 5 114 1.5 4.0 2.8 1.3 138 chr2R 9047407 intron CG13743 - chr2R 9047476 intron CG13743 - chr2R 9047545 intron CG13743 - chr2R_5_9045001 chr2R_9045001 RAL-802_95b 421 chr2R 9151308 9151324 chr2R 9157782 9157809 Burdock 6 6483 3.0 5.5 4.2 1.2 6501 chr2R 9151308 3` UTR CG30345 + chr2R 9154558 intergenic not near genes chr2R 9157809 intergenic CG8008 - chr2R_6_9150001 chr2R_9150001 RAL-802_95b 422 chr2R 9198560 9198817 chr2R 9198661 9198942 6 106 11.0 11.5 11.2 0.5 382 chr2R 9198560 intron unpg + chr2R 9198751 intron unpg + chr2R 9198942 intron unpg + chr2R_6_9195001 chr2R_9195001 RAL-802_95b 423 chr2R 9328901 9328944 chr2R 9329023 9329061 5 120 12.5 10.5 11.5 0.4 160 chr2R 9328901 intron,intron CG13739 -,CG13954 - chr2R 9328981 intron,intron CG13739 -,CG13954 - chr2R 9329061 intron,intron CG13739 -,CG13954 - chr2R_5_9325001 chr2R_9325001 RAL-802_95b 424 chr2R 9390871 9390891 chr2R 9390977 9390997 5 106 7.0 4.0 5.5 0.8 126 chr2R 9390871 exon l(2)03659 + chr2R 9390934 intron l(2)03659 + chr2R 9390997 exon l(2)03659 + chr2R_5_9390001 chr2R_9390001 RAL-802_95b 425 chr2R 9480059 9480099 chr2R 9490610 9490650 roo 12 10548 4.0 4.0 4.0 2.4 10591 chr2R 9480059 intergenic not near genes chr2R 9485354 intergenic not near genes chr2R 9490650 intergenic not near genes chr2R_12_9485001 chr2R_9485001 RAL-802_95b 426 chr2R 9726600 9726613 chr2R 9734171 9734184 17.6 6 7571 6.0 9.0 7.5 0.7 7584 chr2R 9726600 intron sqa - chr2R 9730392 intron sqa - chr2R 9734184 intron sqa - chr2R_6_9730001 chr2R_9730001 RAL-802_95b 427 chr2R 9726616 9726639 chr2R 9734162 9734210 17.6 8 7564 4.0 6.5 5.2 1.3 7594 chr2R 9726616 intron sqa - chr2R 9730413 intron sqa - chr2R 9734210 intron sqa - chr2R_8_9730001 chr2R_9730001 RAL-802_95b 428 chr2R 10017640 10017678 chr2R 10017739 10017777 7 94 1.5 3.5 2.5 2.0 137 chr2R 10017640 intron Pka-R2 - chr2R 10017708 intron Pka-R2 - chr2R 10017777 intron Pka-R2 - chr2R_7_10015001 chr2R_10015001 RAL-802_95b 429 chr2R 10176862 10176908 chr2R 10186044 10186094 roo 12 9184 5.0 4.0 4.5 2.2 9232 chr2R 10176862 intron KCNQ - chr2R 10181478 intron KCNQ - chr2R 10186094 intron KCNQ - chr2R_12_10180001 chr2R_10180001 RAL-802_95b 430 chr2R 10193206 10193225 chr2R 10193310 10193329 6 103 10.0 7.0 8.5 0.6 123 chr2R 10193206 intergenic not near genes chr2R 10193268 intergenic not near genes chr2R 10193329 intergenic not near genes chr2R_6_10190001 chr2R_10190001 RAL-802_95b 431 chr2R 10221209 10221222 chr2R 10221336 10221343 4 126 5.0 4.0 4.5 0.7 134 chr2R 10221209 intron,intron CG12912 -,Hr46 - chr2R 10221276 intron,intron CG12912 -,Hr46 - chr2R 10221343 intron,intron CG12912 -,Hr46 - chr2R_4_10220001 chr2R_10220001 RAL-802_95b 432 chr2R 10274802 10274823 chr2R 10274898 10274914 4 94 6.0 7.0 6.5 0.5 112 chr2R 10274802 intron CAP + chr2R 10274858 intron CAP + chr2R 10274914 intron CAP + chr2R_4_10270001 chr2R_10270001 RAL-802_95b 433 chr2R 10409049 10409083 chr2R 10409146 10409179 9 93 1.5 4.0 2.8 2.4 130 chr2R 10409049 intron CG42732 - chr2R 10409114 intron CG42732 - chr2R 10409179 intron,exon CG42732 -,CG33477 - chr2R_9_10405001 chr2R_10405001 RAL-802_95b 434 chr2R 10432104 10432124 chr2R 10432202 10432217 4 95 12.5 16.5 14.5 0.3 113 chr2R 10432104 intron RanBPM + chr2R 10432160 intron RanBPM + chr2R 10432217 intron RanBPM + chr2R_4_10430001 chr2R_10430001 RAL-802_95b 435 chr2R 10469018 10469056 chr2R 10469153 10469202 5 138 1.0 2.0 1.5 2.0 184 chr2R 10469018 intron CG11777 + chr2R 10469110 intron CG11777 + chr2R 10469202 exon CG11777 + chr2R_5_10465001 chr2R_10465001 RAL-802_95b 436 chr2R 10478774 10478808 chr2R 10478871 10478883 5 93 3.0 1.5 2.2 1.6 109 chr2R 10478774 5` UTR CR45134 + chr2R 10478828 intergenic CR45134 +,trsn -,whd - chr2R 10478883 intergenic CR45134 +,trsn -,whd - chr2R_5_10475001 chr2R_10475001 RAL-802_95b 437 chr2R 10546570 10546592 chr2R 10546671 10546703 5 106 16.5 16.5 16.5 0.3 133 chr2R 10546570 intergenic not near genes chr2R 10546636 intergenic not near genes chr2R 10546703 intergenic not near genes chr2R_5_10545001 chr2R_10545001 RAL-802_95b 438 chr2R 10622358 10622366 chr2R 10637119 10637145 mdg1 4 14770 3.5 1.0 2.2 1.2 14787 chr2R 10622358 intron CG11883 + chr2R 10629752 intron CG11883 + chr2R 10637145 intron CG11883 + chr2R_4_10625001 chr2R_10625001 RAL-802_95b 439 chr2R 10790124 10790166 chr2R 10790232 10790274 12 101 2.5 2.0 2.2 3.8 150 chr2R 10790124 intron CG33144 - chr2R 10790199 intron CG33144 - chr2R 10790274 intron CG33144 - chr2R_12_10790001 chr2R_10790001 RAL-802_95b 440 chr2R 10860465 10860584 chr2R 10860567 10860670 5 96 1.5 0.5 1.0 2.5 205 chr2R 10860465 intron CG30015 - chr2R 10860568 intron CG30015 - chr2R 10860670 intron CG30015 - chr2R_5_10860001 chr2R_10860001 RAL-802_95b 441 chr2R 10871655 10871672 chr2R 10871732 10871776 4 97 5.0 9.0 7.0 0.5 121 chr2R 10871655 intron CG30015 - chr2R 10871716 intron CG30015 - chr2R 10871776 intron CG30015 - chr2R_4_10870001 chr2R_10870001 RAL-802_95b 442 chr2R 10873328 10873371 chr2R 10873435 10873478 12 104 11.0 10.0 10.5 1.0 150 chr2R 10873328 intron CG30015 - chr2R 10873403 intron CG30015 - chr2R 10873478 intron CG30015 - chr2R_12_10870001 chr2R_10870001 RAL-802_95b 443 chr2R 11171527 11171558 chr2R 11171704 11171704 4 169 4.5 6.0 5.2 0.6 177 chr2R 11171527 intron,intron CG13229 -,shn + chr2R 11171616 intron,intron CG13229 -,shn + chr2R 11171704 intron,intron CG13229 -,shn + chr2R_4_11170001 chr2R_11170001 RAL-802_95b 444 chr2R 11179249 11179277 chr2R 11179355 11179378 7 102 4.5 1.5 3.0 1.8 129 chr2R 11179249 intron shn + chr2R 11179314 intron shn + chr2R 11179378 intron shn + chr2R_7_11175001 chr2R_11175001 RAL-802_95b 445 chr2R 11202118 11202139 chr2R 11202232 11202253 5 114 20.5 12.5 16.5 0.3 135 chr2R 11202118 intron shn + chr2R 11202186 intron shn + chr2R 11202253 intron shn + chr2R_5_11200001 chr2R_11200001 RAL-802_95b 446 chr2R 11207811 11207845 chr2R 11208024 11208038 BS 9 207 4.0 7.5 5.8 1.3 227 chr2R 11207811 intron shn + chr2R 11207924 intron shn + chr2R 11208038 intron shn + chr2R_9_11205001 chr2R_11205001 RAL-802_95b 447 chr2R 11297597 11297642 chr2R 11301938 11301983 flea 7 4337 4.0 1.5 2.8 1.8 4386 chr2R 11297597 intergenic CG42336 - chr2R 11299790 intergenic not near genes chr2R 11301983 5` UTR CG7741 + chr2R_7_11295001 chr2R_11295001 RAL-802_95b 448 chr2R 11472645 11472664 chr2R 11473857 11473880 pogo 4 1216 5.5 2.0 3.8 0.8 1235 chr2R 11472645 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473880 intergenic not near genes chr2R_4_11470001 chr2R_11470001 RAL-802_95b 449 chr2R 11568683 11568718 chr2R 11568813 11568833 5 121 6.0 2.0 4.0 1.0 150 chr2R 11568683 intergenic not near genes chr2R 11568758 intergenic not near genes chr2R 11568833 intergenic not near genes chr2R_5_11565001 chr2R_11565001 RAL-802_95b 450 chr2R 11614613 11614796 chr2R 11614721 11614904 17 107 5.5 6.0 5.8 2.5 291 chr2R 11614613 intron tou - chr2R 11614758 intron tou - chr2R 11614904 intron tou - chr2R_17_11610001 chr2R_11610001 RAL-802_95b 451 chr2R 11631376 11631410 chr2R 11631476 11631500 7 96 0.5 6.0 3.2 1.7 124 chr2R 11631376 intron CG9005 - chr2R 11631438 intron CG9005 - chr2R 11631500 intron CG9005 - chr2R_7_11630001 chr2R_11630001 RAL-802_95b 452 chr2R 11724137 11724175 chr2R 11724240 11724273 7 98 4.0 0.5 2.2 2.2 136 chr2R 11724137 intron pyr + chr2R 11724205 intron pyr + chr2R 11724273 intron pyr + chr2R_7_11720001 chr2R_11720001 RAL-802_95b 453 chr2R 11787432 11787455 chr2R 11787538 11787546 6 103 4.0 2.5 3.2 1.4 114 chr2R 11787432 intron ths + chr2R 11787489 intron ths + chr2R 11787546 intron ths + chr2R_6_11785001 chr2R_11785001 RAL-802_95b 454 chr2R 11787457 11787468 chr2R 11787533 11787574 7 94 2.5 2.0 2.2 2.2 117 chr2R 11787457 intron ths + chr2R 11787516 intron ths + chr2R 11787574 intron ths + chr2R_7_11785001 chr2R_11785001 RAL-802_95b 455 chr2R 11934062 11934110 chr2R 11934161 11934171 5 88 4.0 0.5 2.2 1.6 109 chr2R 11934062 intergenic not near genes chr2R 11934116 intergenic not near genes chr2R 11934171 intergenic not near genes chr2R_5_11930001 chr2R_11930001 RAL-802_95b 456 chr2R 12093943 12093974 chr2R 12094076 12094107 5 133 3.5 2.0 2.8 1.3 164 chr2R 12093943 intron jeb - chr2R 12094025 intron jeb - chr2R 12094107 intron jeb - chr2R_5_12090001 chr2R_12090001 RAL-802_95b 457 chr2R 12279040 12279058 chr2R 12279173 12279191 4 133 1.5 5.5 3.5 0.9 151 chr2R 12279040 intergenic Cam + chr2R 12279116 intergenic Cam + chr2R 12279191 intergenic Cam + chr2R_4_12275001 chr2R_12275001 RAL-802_95b 458 chr2R 12334873 12334881 chr2R 12334966 12334979 4 96 10.5 2.0 6.2 0.6 106 chr2R 12334873 intergenic CG8490 + chr2R 12334926 intergenic CG8490 + chr2R 12334979 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 RAL-802_95b 459 chr2R 12363364 12363410 chr2R 12363815 12363858 12 449 3.0 0.0 1.5 4.8 494 chr2R 12363364 intergenic CG30043 + chr2R 12363611 intergenic CG30043 + chr2R 12363858 intergenic not near genes chr2R_12_12360001 chr2R_12360001 RAL-802_95b 460 chr2R 12385343 12385372 chr2R 12385444 12385453 9 98 0.0 2.5 1.2 4.1 110 chr2R 12385343 intergenic not near genes chr2R 12385398 intergenic not near genes chr2R 12385453 intergenic not near genes chr2R_9_12385001 chr2R_12385001 RAL-802_95b 461 chr2R 12565545 12565588 chr2R 12565935 12565978 13 389 7.0 5.0 6.0 1.9 433 chr2R 12565545 intergenic not near genes chr2R 12565762 intergenic Cyp301a1 + chr2R 12565978 intergenic Cyp301a1 + chr2R_13_12565001 chr2R_12565001 RAL-802_95b 462 chr2R 12707518 12707543 chr2R 12715889 12715929 roo 8 8380 3.0 2.5 2.8 2.1 8411 chr2R 12707518 intron CG42663 + chr2R 12711724 intron CG42663 + chr2R 12715929 intron CG42663 + chr2R_8_12710001 chr2R_12710001 RAL-802_95b 463 chr2R 12771316 12771339 chr2R 12771445 12771468 5 129 10.5 7.0 8.8 0.5 152 chr2R 12771316 intergenic not near genes chr2R 12771392 intergenic not near genes chr2R 12771468 intergenic not near genes chr2R_5_12770001 chr2R_12770001 RAL-802_95b 464 chr2R 12988276 12988420 chr2R 12988388 12988544 5 120 5.0 4.0 4.5 0.9 268 chr2R 12988276 intergenic not near genes chr2R 12988410 intergenic not near genes chr2R 12988544 intergenic not near genes chr2R_5_12985001 chr2R_12985001 RAL-802_95b 465 chr2R 13092325 13092364 chr2R 13092462 13092504 4 130 1.5 1.0 1.2 1.8 179 chr2R 13092325 intergenic not near genes chr2R 13092414 intergenic not near genes chr2R 13092504 intergenic not near genes chr2R_4_13090001 chr2R_13090001 RAL-802_95b 466 chr2R 13334249 13334296 chr2R 13334355 13334387 8 102 4.5 5.0 4.8 1.4 138 chr2R 13334249 intron CR44206 - chr2R 13334318 intron CR44206 - chr2R 13334387 intron CR44206 - chr2R_8_13330001 chr2R_13330001 RAL-802_95b 467 chr2R 13364688 13364714 chr2R 13364794 13364820 5 106 7.5 5.0 6.2 0.7 132 chr2R 13364688 intergenic not near genes chr2R 13364754 intergenic not near genes chr2R 13364820 intergenic not near genes chr2R_5_13360001 chr2R_13360001 RAL-802_95b 468 chr2R 13431473 13431505 chr2R 13431572 13431604 8 98 7.0 0.5 3.8 1.7 131 chr2R 13431473 intron CG42321 - chr2R 13431538 intron CG42321 - chr2R 13431604 intron CG42321 - chr2R_8_13430001 chr2R_13430001 RAL-802_95b 469 chr2R 13432939 13432966 chr2R 13433025 13433032 4 86 9.0 10.0 9.5 0.4 93 chr2R 13432939 intron CG42321 - chr2R 13432986 intron CG42321 - chr2R 13433032 intron,5` UTR CG42321 -,CG30065 + chr2R_4_13430001 chr2R_13430001 RAL-802_95b 470 chr2R 13438864 13438883 chr2R 13440178 13440197 5 1305 15.0 11.5 13.2 0.4 1333 chr2R 13438864 5` UTR CG42321 - chr2R 13439530 3` UTR cnn - chr2R 13440197 exon cnn - chr2R_5_13435001 chr2R_13435001 RAL-802_95b 471 chr2R 13544550 13544589 chr2R 13544641 13544685 7 82 5.0 12.0 8.5 0.7 135 chr2R 13544550 intron CG6145 - chr2R 13544618 intron CG6145 - chr2R 13544685 intron CG6145 - chr2R_7_13540001 chr2R_13540001 RAL-802_95b 472 chr2R 13547065 13547107 chr2R 13547280 13547322 12 211 1.0 4.5 2.8 3.2 257 chr2R 13547065 intron CG6145 - chr2R 13547194 intron CG6145 - chr2R 13547322 intron CG6145 - chr2R_12_13545001 chr2R_13545001 RAL-802_95b 473 chr2R 13577454 13577465 chr2R 13577513 13577553 4 85 5.5 5.0 5.2 0.6 99 chr2R 13577454 5` UTR CR44365 + chr2R 13577504 5` UTR CR44365 + chr2R 13577553 intergenic CR44365 +,CR44366 + chr2R_4_13575001 chr2R_13575001 RAL-802_95b 474 chr2R 13728124 13728165 chr2R 13735794 13735832 opus 11 7675 2.5 4.5 3.5 2.4 7708 chr2R 13728124 intron fas + chr2R 13731978 intron fas + chr2R 13735832 intron fas + chr2R_11_13730001 chr2R_13730001 RAL-802_95b 475 chr2R 13868882 13868928 chr2R 13868981 13869007 10 96 1.5 5.0 3.2 2.4 125 chr2R 13868882 intron shot - chr2R 13868944 intron shot - chr2R 13869007 intron shot - chr2R_10_13865001 chr2R_13865001 RAL-802_95b 476 chr2R 13925829 13925870 chr2R 13926025 13926066 12 190 4.0 2.0 3.0 3.0 237 chr2R 13925829 intron shot - chr2R 13925948 intron shot - chr2R 13926066 intron shot - chr2R_12_13925001 chr2R_13925001 RAL-802_95b 477 chr2R 14168361 14168392 chr2R 14168462 14168471 4 100 10.0 12.5 11.2 0.3 110 chr2R 14168361 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168416 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168471 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_4_14165001 chr2R_14165001 RAL-802_95b 478 chr2R 14182860 14182893 chr2R 14182966 14182995 5 104 11.0 12.5 11.8 0.4 135 chr2R 14182860 intergenic cg + chr2R 14182928 intergenic cg + chr2R 14182995 intergenic cg + chr2R_5_14180001 chr2R_14180001 RAL-802_95b 479 chr2R 14306099 14306124 chr2R 14306195 14306220 5 94 13.0 10.5 11.8 0.4 121 chr2R 14306099 intergenic not near genes chr2R 14306160 intergenic not near genes chr2R 14306220 intergenic not near genes chr2R_5_14305001 chr2R_14305001 RAL-802_95b 480 chr2R 14514477 14514494 chr2R 14514580 14514601 5 105 3.5 4.0 3.8 1.0 124 chr2R 14514477 intron,intron Cpr51A -,CG30197 + chr2R 14514539 intron,intron Cpr51A -,CG30197 + chr2R 14514601 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 RAL-802_95b 481 chr2R 14610228 14610259 chr2R 14610339 14610353 4 101 5.0 7.5 6.2 0.6 125 chr2R 14610228 exon Su(var)2-HP2 - chr2R 14610290 exon Su(var)2-HP2 - chr2R 14610353 exon Su(var)2-HP2 - chr2R_4_14610001 chr2R_14610001 RAL-802_95b 482 chr2R 14799875 14799888 chr2R 14799971 14799984 4 96 2.0 11.0 6.5 0.5 109 chr2R 14799875 intron kn - chr2R 14799930 intron kn - chr2R 14799984 intron kn - chr2R_4_14795001 chr2R_14795001 RAL-802_95b 483 chr2R 14855059 14855064 chr2R 14855131 14855134 4 72 1.0 1.0 1.0 2.0 75 chr2R 14855059 intergenic Ciao1 -,HPS1 + chr2R 14855096 intergenic Ciao1 -,HPS1 + chr2R 14855134 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 RAL-802_95b 484 chr2R 14911682 14911728 chr2R 14911825 14911871 7 142 3.5 4.0 3.8 1.5 189 chr2R 14911682 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911871 intron CG10249 - chr2R_7_14910001 chr2R_14910001 RAL-802_95b 485 chr2R 14913655 14913694 chr2R 14913775 14913812 12 121 7.0 8.0 7.5 1.4 157 chr2R 14913655 intron CG10249 - chr2R 14913734 intron CG10249 - chr2R 14913812 intron CG10249 - chr2R_12_14910001 chr2R_14910001 RAL-802_95b 486 chr2R 14916395 14916423 chr2R 14916582 14916605 4 186 1.0 9.0 5.0 0.7 210 chr2R 14916395 intron CG10249 - chr2R 14916500 intron CG10249 - chr2R 14916605 intron CG10249 - chr2R_4_14915001 chr2R_14915001 RAL-802_95b 487 chr2R 14919077 14919090 chr2R 14919175 14919181 5 100 5.5 10.0 7.8 0.6 104 chr2R 14919077 intron CG10249 - chr2R 14919129 intron CG10249 - chr2R 14919181 intron CG10249 - chr2R_5_14915001 chr2R_14915001 RAL-802_95b 488 chr2R 14922132 14922223 chr2R 14922218 14922381 6 154 2.5 3.5 3.0 1.5 249 chr2R 14922132 intron CG10249 - chr2R 14922256 intron CG10249 - chr2R 14922381 intron CG10249 - chr2R_6_14920001 chr2R_14920001 RAL-802_95b 489 chr2R 15004727 15004751 chr2R 15005058 15005100 jockey 7 343 1.5 3.5 2.5 2.0 373 chr2R 15004727 intergenic not near genes chr2R 15004914 intergenic not near genes chr2R 15005100 intergenic not near genes chr2R_7_15000001 chr2R_15000001 RAL-802_95b 490 chr2R 15015444 15015479 chr2R 15022888 15022923 mdg1 7 7437 2.0 2.5 2.2 2.2 7479 chr2R 15015444 intron hbs + chr2R 15019184 intron hbs + chr2R 15022923 intron hbs + chr2R_7_15015001 chr2R_15015001 RAL-802_95b 491 chr2R 15119299 15119340 chr2R 15127800 15127820 Tirant 4 8494 4.0 3.5 3.8 0.8 8521 chr2R 15119299 intron chn + chr2R 15123560 intron chn + chr2R 15127820 intron chn + chr2R_4_15120001 chr2R_15120001 RAL-802_95b 492 chr2R 15201218 15201240 chr2R 15201329 15201335 6 104 5.0 4.0 4.5 1.1 117 chr2R 15201218 intergenic GPHR -,CG11807 + chr2R 15201276 5` UTR CG11807 + chr2R 15201335 5` UTR CG11807 + chr2R_6_15200001 chr2R_15200001 RAL-802_95b 493 chr2R 15295866 15296159 chr2R 15296028 15296244 8 115 1.5 7.5 4.5 1.5 378 chr2R 15295866 intron Trpm - chr2R 15296055 intron Trpm - chr2R 15296244 intron Trpm - chr2R_8_15295001 chr2R_15295001 RAL-802_95b 494 chr2R 15330189 15330238 chr2R 15330343 15330392 9 151 1.5 1.0 1.2 4.1 203 chr2R 15330189 intergenic CR44371 - chr2R 15330290 intergenic CR44371 - chr2R 15330392 intergenic CR44371 - chr2R_9_15330001 chr2R_15330001 RAL-802_95b 495 chr2R 15666519 15666572 chr2R 15666620 15666669 11 97 7.5 7.5 7.5 1.3 150 chr2R 15666519 intron fus - chr2R 15666594 intron fus - chr2R 15666669 intron fus - chr2R_11_15665001 chr2R_15665001 RAL-802_95b 496 chr2R 15679086 15679130 chr2R 15679190 15679201 13 98 4.5 3.0 3.8 2.7 115 chr2R 15679086 intergenic CG8207 -,Vha14-1 - chr2R 15679144 intergenic CG8207 -,Vha14-1 - chr2R 15679201 intergenic Vha14-1 -,CG8207 - chr2R_13_15675001 chr2R_15675001 RAL-802_95b 497 chr2R 15702337 15702383 chr2R 15702442 15702477 8 103 6.5 3.5 5.0 1.3 140 chr2R 15702337 intergenic not near genes chr2R 15702407 intergenic not near genes chr2R 15702477 intergenic not near genes chr2R_8_15700001 chr2R_15700001 RAL-802_95b 498 chr2R 16225374 16225389 chr2R 16225463 16225502 4 104 8.0 7.0 7.5 0.5 128 chr2R 16225374 intron CG15706 - chr2R 16225438 intron CG15706 - chr2R 16225502 intron CG15706 - chr2R_4_16225001 chr2R_16225001 RAL-802_95b 499 chr2R 16539623 16539666 chr2R 16544852 16544891 copia 13 5224 3.5 4.5 4.0 2.6 5268 chr2R 16539623 intergenic not near genes chr2R 16542257 intergenic not near genes chr2R 16544891 intergenic not near genes chr2R_13_16540001 chr2R_16540001 RAL-802_95b 500 chr2R 16571871 16571884 chr2R 16571976 16571999 6 113 5.0 3.5 4.2 1.2 128 chr2R 16571871 intergenic CG4927 + chr2R 16571935 intergenic CG4927 + chr2R 16571999 intergenic CG4927 + chr2R_6_16570001 chr2R_16570001 RAL-802_95b 501 chr2R 16571887 16571903 chr2R 16571972 16572018 6 102 5.0 3.0 4.0 1.2 131 chr2R 16571887 intergenic CG4927 + chr2R 16571952 intergenic CG4927 + chr2R 16572018 intergenic CG4927 + chr2R_6_16570001 chr2R_16570001 RAL-802_95b 502 chr2R 16614116 16614123 chr2R 16614355 16614362 5 239 5.0 5.0 5.0 0.8 246 chr2R 16614116 intron CG5065 + chr2R 16614239 intron CG5065 + chr2R 16614362 intron CG5065 + chr2R_5_16610001 chr2R_16610001 RAL-802_95b 503 chr2R 16614129 16614141 chr2R 16614353 16614356 4 225 3.0 4.0 3.5 0.9 227 chr2R 16614129 intron CG5065 + chr2R 16614242 intron CG5065 + chr2R 16614356 intron CG5065 + chr2R_4_16610001 chr2R_16610001 RAL-802_95b 504 chr2R 16617064 16617073 chr2R 16617163 16617172 5 99 4.5 2.0 3.2 1.2 108 chr2R 16617064 intron CG5065 + chr2R 16617118 intron CG5065 + chr2R 16617172 intron CG5065 + chr2R_5_16615001 chr2R_16615001 RAL-802_95b 505 chr2R 16725710 16725748 chr2R 16725828 16725862 4 120 6.0 5.0 5.5 0.6 152 chr2R 16725710 intron CG30463 - chr2R 16725786 intron CG30463 - chr2R 16725862 intron CG30463 - chr2R_4_16725001 chr2R_16725001 RAL-802_95b 506 chr2R 17147226 17147265 chr2R 17152277 17152316 jockey 12 5044 4.0 2.5 3.2 2.9 5090 chr2R 17147226 intergenic not near genes chr2R 17149771 intergenic not near genes chr2R 17152316 intergenic not near genes chr2R_12_17145001 chr2R_17145001 RAL-802_95b 507 chr2R 17176363 17176385 chr2R 17182573 17182595 diver 6 6210 0.5 5.0 2.8 1.6 6232 chr2R 17176363 intergenic not near genes chr2R 17179479 intergenic not near genes chr2R 17182595 intergenic not near genes chr2R_6_17175001 chr2R_17175001 RAL-802_95b 508 chr2R 17236492 17236534 chr2R 17241716 17241748 copia 7 5219 1.5 4.0 2.8 1.8 5256 chr2R 17236492 intron mbl + chr2R 17239120 intron mbl + chr2R 17241748 intron mbl + chr2R_7_17235001 chr2R_17235001 RAL-802_95b 509 chr2R 17470313 17470355 chr2R 17470402 17470420 12 93 1.5 1.0 1.2 5.5 107 chr2R 17470313 intron qkr54B + chr2R 17470366 intron qkr54B + chr2R 17470420 intron qkr54B + chr2R_12_17470001 chr2R_17470001 RAL-802_95b 510 chr2R 17485909 17485949 chr2R 17490699 17490737 F-element 8 4788 2.5 4.5 3.5 1.8 4828 chr2R 17485909 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488323 intron NT5E-2 + chr2R 17490737 intron NT5E-2 + chr2R_8_17485001 chr2R_17485001 RAL-802_95b 511 chr2R 17708376 17708388 chr2R 17708477 17708489 7 101 6.5 4.0 5.2 1.1 113 chr2R 17708376 intron CG6424 - chr2R 17708432 intron CG6424 - chr2R 17708489 intron CG6424 - chr2R_7_17705001 chr2R_17705001 RAL-802_95b 512 chr2R 17708389 17708406 chr2R 17708475 17708507 11 97 3.5 3.5 3.5 2.4 118 chr2R 17708389 intron CG6424 - chr2R 17708448 intron CG6424 - chr2R 17708507 intron CG6424 - chr2R_11_17705001 chr2R_17705001 RAL-802_95b 513 chr2R 17709968 17710117 chr2R 17710079 17710215 17 101 0.0 0.0 0.0 17.0 247 chr2R 17709968 intron CG6424 - chr2R 17710092 intron CG6424 - chr2R 17710215 intron CG6424 - chr2R_17_17710001 chr2R_17710001 RAL-802_95b 514 chr2R 17720899 17720943 chr2R 17721002 17721046 11 101 5.5 3.5 4.5 2.0 147 chr2R 17720899 intergenic not near genes chr2R 17720972 intergenic not near genes chr2R 17721046 intergenic not near genes chr2R_11_17720001 chr2R_17720001 RAL-802_95b 515 chr2R 17730636 17730673 chr2R 17730734 17730771 9 97 3.5 4.5 4.0 1.8 135 chr2R 17730636 intron,intron CG4975 +,CG4984 + chr2R 17730704 intron,intron CG4975 +,CG4984 + chr2R 17730771 intron,intron CG4975 +,CG4984 + chr2R_9_17730001 chr2R_17730001 RAL-802_95b 516 chr2R 17782345 17782391 chr2R 17783568 17783604 pogo 10 1221 5.0 1.5 3.2 2.4 1259 chr2R 17782345 intergenic CG33981 -,fab1 - chr2R 17782974 intergenic not near genes chr2R 17783604 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-802_95b 517 chr2R 17784017 17784053 chr2R 17784278 17784298 pogo 5 258 3.5 1.5 2.5 1.4 281 chr2R 17784017 intergenic mir-31a - chr2R 17784158 intergenic mir-31a - chr2R 17784298 intergenic mir-31a - chr2R_5_17780001 chr2R_17780001 RAL-802_95b 518 chr2R 17794764 17794788 chr2R 17794863 17794886 10 97 4.0 1.0 2.5 2.9 122 chr2R 17794764 intron Dhit + chr2R 17794825 intron Dhit + chr2R 17794886 intron Dhit + chr2R_10_17790001 chr2R_17790001 RAL-802_95b 519 chr2R 17852914 17852958 chr2R 17853025 17853042 8 103 2.0 4.5 3.2 1.9 128 chr2R 17852914 intron olf186-F + chr2R 17852978 intron olf186-F + chr2R 17853042 intron olf186-F + chr2R_8_17850001 chr2R_17850001 RAL-802_95b 520 chr2R 17860151 17860201 chr2R 17860253 17860272 13 96 0.5 1.5 1.0 6.5 121 chr2R 17860151 3` UTR olf186-F + chr2R 17860212 3` UTR olf186-F + chr2R 17860272 3` UTR olf186-F + chr2R_13_17860001 chr2R_17860001 RAL-802_95b 521 chr2R 17869695 17869726 chr2R 17869810 17869841 9 114 6.0 5.5 5.8 1.3 146 chr2R 17869695 intron,5` UTR Mapmodulin -,CR44417 + chr2R 17869768 intron,5` UTR Mapmodulin -,CR44417 + chr2R 17869841 intron,5` UTR Mapmodulin -,CR44417 + chr2R_9_17865001 chr2R_17865001 RAL-802_95b 522 chr2R 17918150 17918190 chr2R 17918247 17918266 6 84 3.5 1.0 2.2 1.9 116 chr2R 17918150 intron Elk + chr2R 17918208 intron Elk + chr2R 17918266 intron Elk + chr2R_6_17915001 chr2R_17915001 RAL-802_95b 523 chr2R 17921438 17921470 chr2R 17921540 17921572 6 102 2.0 4.0 3.0 1.5 134 chr2R 17921438 intron Elk + chr2R 17921505 intron Elk + chr2R 17921572 intron Elk + chr2R_6_17920001 chr2R_17920001 RAL-802_95b 524 chr2R 18045652 18045677 chr2R 18046024 18046049 jockey 9 371 1.5 5.5 3.5 2.0 397 chr2R 18045652 intergenic not near genes chr2R 18045850 intergenic not near genes chr2R 18046049 intergenic CG5767 - chr2R_9_18045001 chr2R_18045001 RAL-802_95b 525 chr2R 18045679 18045700 chr2R 18046023 18046072 jockey 6 362 1.5 5.5 3.5 1.3 393 chr2R 18045679 intergenic not near genes chr2R 18045876 intergenic not near genes chr2R 18046072 intergenic CG5767 - chr2R_6_18045001 chr2R_18045001 RAL-802_95b 526 chr2R 18111680 18111697 chr2R 18115557 18115585 F-element 5 3884 5.5 4.0 4.8 0.9 3905 chr2R 18111680 intergenic not near genes chr2R 18113632 intergenic not near genes chr2R 18115585 intergenic not near genes chr2R_5_18110001 chr2R_18110001 RAL-802_95b 527 chr2R 18111698 18111714 chr2R 18115554 18115582 F-element 12 3879 3.5 3.5 3.5 2.7 3884 chr2R 18111698 intergenic not near genes chr2R 18113640 intergenic not near genes chr2R 18115582 intergenic not near genes chr2R_12_18110001 chr2R_18110001 RAL-802_95b 528 chr2R 18314403 18314431 chr2R 18314481 18314518 8 91 0.5 2.0 1.2 3.6 115 chr2R 18314403 intron sbb - chr2R 18314460 intron sbb - chr2R 18314518 intron sbb - chr2R_8_18310001 chr2R_18310001 RAL-802_95b 529 chr2R 18393692 18393714 chr2R 18394292 18394314 4 594 6.0 2.5 4.2 0.8 622 chr2R 18393692 5` UTR Idgf5 + chr2R 18394003 exon Idgf5 + chr2R 18394314 exon Idgf5 + chr2R_4_18390001 chr2R_18390001 RAL-802_95b 530 chr2R 18435789 18435837 chr2R 18435893 18435926 7 101 5.5 0.5 3.0 1.8 137 chr2R 18435789 intron CG30118 - chr2R 18435858 intron CG30118 - chr2R 18435926 intron CG30118 - chr2R_7_18435001 chr2R_18435001 RAL-802_95b 531 chr2R 18463678 18463683 chr2R 18463799 18463804 4 121 4.0 0.0 2.0 1.3 126 chr2R 18463678 intron CG30116 - chr2R 18463741 intron CG30116 - chr2R 18463804 intron CG30116 - chr2R_4_18460001 chr2R_18460001 RAL-802_95b 532 chr2R 18575811 18575827 chr2R 18581983 18582035 3S18 10 6186 0.5 2.5 1.5 4.0 6224 chr2R 18575811 intron GEFmeso - chr2R 18578923 intron GEFmeso - chr2R 18582035 intron GEFmeso - chr2R_10_18575001 chr2R_18575001 RAL-802_95b 533 chr2R 18605122 18605131 chr2R 18605234 18605243 4 112 6.5 4.5 5.5 0.6 121 chr2R 18605122 intron GEFmeso - chr2R 18605182 intron GEFmeso - chr2R 18605243 intron GEFmeso - chr2R_4_18605001 chr2R_18605001 RAL-802_95b 534 chr2R 18605133 18605159 chr2R 18605224 18605270 11 105 2.0 2.0 2.0 3.7 137 chr2R 18605133 intron GEFmeso - chr2R 18605202 intron GEFmeso - chr2R 18605270 intron GEFmeso - chr2R_11_18605001 chr2R_18605001 RAL-802_95b 535 chr2R 18692880 18692919 chr2R 18692987 18692990 7 99 2.5 2.5 2.5 2.0 110 chr2R 18692880 intron Sik3 + chr2R 18692935 intron Sik3 + chr2R 18692990 intron Sik3 + chr2R_7_18690001 chr2R_18690001 RAL-802_95b 536 chr2R 18862288 18862403 chr2R 18862395 18862509 8 109 0.0 0.0 0.0 8.0 221 chr2R 18862288 intergenic Jheh3 - chr2R 18862398 intergenic Jheh3 -,CG43069 + chr2R 18862509 intergenic CG43069 +,Jheh3 - chr2R_8_18860001 chr2R_18860001 RAL-802_95b 537 chr2R 18871636 18871670 chr2R 18871736 18871768 6 103 3.0 1.5 2.2 1.9 132 chr2R 18871636 intergenic not near genes chr2R 18871702 intergenic not near genes chr2R 18871768 intergenic not near genes chr2R_6_18870001 chr2R_18870001 RAL-802_95b 538 chr2R 18926485 18926529 chr2R 18926592 18926636 11 106 1.0 1.0 1.0 5.5 151 chr2R 18926485 intron sano + chr2R 18926560 intron sano + chr2R 18926636 intron sano + chr2R_11_18925001 chr2R_18925001 RAL-802_95b 539 chr2R 18930433 18930482 chr2R 18930545 18930595 14 111 3.0 2.0 2.5 4.0 162 chr2R 18930433 intron sano + chr2R 18930514 intron sano + chr2R 18930595 intron sano + chr2R_14_18930001 chr2R_18930001 RAL-802_95b 540 chr2R 18984452 18984492 chr2R 18984726 18984731 5 266 2.5 1.5 2.0 1.7 279 chr2R 18984452 intergenic not near genes chr2R 18984592 intergenic not near genes chr2R 18984731 intergenic not near genes chr2R_5_18980001 chr2R_18980001 RAL-802_95b 541 chr2R 18992011 18992047 chr2R 18992157 18992193 10 157 1.0 2.0 1.5 4.0 182 chr2R 18992011 intron tn + chr2R 18992102 intron tn + chr2R 18992193 intron tn + chr2R_10_18990001 chr2R_18990001 RAL-802_95b 542 chr2R 19067709 19067755 chr2R 19067800 19067824 8 86 3.5 1.5 2.5 2.3 115 chr2R 19067709 intron 5-HT1A + chr2R 19067766 intron 5-HT1A + chr2R 19067824 intron 5-HT1A + chr2R_8_19065001 chr2R_19065001 RAL-802_95b 543 chr2R 19168742 19168764 chr2R 19168822 19168867 7 96 1.0 1.5 1.2 3.2 125 chr2R 19168742 intron CG10737 + chr2R 19168804 intron CG10737 + chr2R 19168867 intron CG10737 + chr2R_7_19165001 chr2R_19165001 RAL-802_95b 544 chr2R 19169517 19169565 chr2R 19169727 19169757 9 183 2.5 2.5 2.5 2.6 240 chr2R 19169517 intron CG10737 + chr2R 19169637 intron CG10737 + chr2R 19169757 intron CG10737 + chr2R_9_19165001 chr2R_19165001 RAL-802_95b 545 chr2R 19351694 19351713 chr2R 19352537 19352566 4 849 2.0 1.5 1.8 1.4 872 chr2R 19351694 intron Rgk1 - chr2R 19352130 intron Rgk1 - chr2R 19352566 intron Rgk1 - chr2R_4_19350001 chr2R_19350001 RAL-802_95b 546 chr2R 19536455 19536497 chr2R 19536557 19536599 12 101 2.5 3.0 2.8 3.2 144 chr2R 19536455 intron sm - chr2R 19536527 intron sm - chr2R 19536599 intron sm - chr2R_12_19535001 chr2R_19535001 RAL-802_95b 547 chr2R 19653918 19653953 chr2R 19654031 19654053 8 108 2.0 1.5 1.8 2.9 135 chr2R 19653918 intergenic CR44213 + chr2R 19653986 intergenic CR44213 + chr2R 19654053 intergenic CR44213 + chr2R_8_19650001 chr2R_19650001 RAL-802_95b 548 chr2R 19773991 19774035 chr2R 19774124 19774160 9 129 3.0 3.5 3.2 2.1 169 chr2R 19773991 intergenic not near genes chr2R 19774076 intergenic not near genes chr2R 19774160 intergenic not near genes chr2R_9_19770001 chr2R_19770001 RAL-802_95b 549 chr2R 19776581 19776627 chr2R 19779918 19779963 jockey 9 3339 1.5 2.0 1.8 3.2 3382 chr2R 19776581 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779963 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-802_95b 550 chr2R 19914830 19914867 chr2R 19922262 19922299 mdg1 4 7429 7.0 1.0 4.0 0.8 7469 chr2R 19914830 intergenic not near genes chr2R 19918564 intergenic not near genes chr2R 19922299 intergenic not near genes chr2R_4_19915001 chr2R_19915001 RAL-802_95b 551 chr2R 19943272 19943282 chr2R 19943382 19943407 5 122 1.5 1.0 1.2 2.3 135 chr2R 19943272 intergenic not near genes chr2R 19943340 intergenic not near genes chr2R 19943407 intergenic not near genes chr2R_5_19940001 chr2R_19940001 RAL-802_95b 552 chr2R 20020235 20020281 chr2R 20020395 20020409 4 149 1.0 0.5 0.8 2.2 174 chr2R 20020235 intergenic not near genes chr2R 20020322 intergenic not near genes chr2R 20020409 intergenic not near genes chr2R_4_20020001 chr2R_20020001 RAL-802_95b 553 chr2R 20069226 20069258 chr2R 20071876 20071908 opus 7 2649 2.5 0.5 1.5 2.8 2682 chr2R 20069226 intergenic not near genes chr2R 20070567 intergenic not near genes chr2R 20071908 intergenic not near genes chr2R_7_20070001 chr2R_20070001 RAL-802_95b 554 chr2R 20106121 20106162 chr2R 20106231 20106252 9 104 0.0 2.0 1.0 4.5 131 chr2R 20106121 intergenic not near genes chr2R 20106186 intergenic not near genes chr2R 20106252 intergenic not near genes chr2R_9_20105001 chr2R_20105001 RAL-802_95b 555 chr2R 20125732 20125749 chr2R 20125827 20125840 4 94 2.5 7.0 4.8 0.7 108 chr2R 20125732 intergenic not near genes chr2R 20125786 intergenic not near genes chr2R 20125840 intergenic not near genes chr2R_4_20125001 chr2R_20125001 RAL-802_95b 556 chr2R 20233043 20233061 chr2R 20233123 20233165 7 97 3.5 6.0 4.8 1.2 122 chr2R 20233043 intron CG11044 + chr2R 20233104 intron CG11044 + chr2R 20233165 intron CG11044 + chr2R_7_20230001 chr2R_20230001 RAL-802_95b 557 chr2R 20395022 20395055 chr2R 20395199 20395251 4 190 2.5 0.5 1.5 1.6 229 chr2R 20395022 intergenic not near genes chr2R 20395136 intergenic not near genes chr2R 20395251 intergenic not near genes chr2R_4_20395001 chr2R_20395001 RAL-802_95b 558 chr2R 20524317 20524334 chr2R 20524452 20524480 5 142 0.5 3.0 1.8 1.8 163 chr2R 20524317 intergenic not near genes chr2R 20524398 intergenic not near genes chr2R 20524480 intergenic not near genes chr2R_5_20520001 chr2R_20520001 RAL-802_95b 559 chr2R 20541981 20542017 chr2R 20542079 20542115 7 91 4.0 3.0 3.5 1.6 134 chr2R 20541981 intergenic not near genes chr2R 20542048 intergenic not near genes chr2R 20542115 intergenic not near genes chr2R_7_20540001 chr2R_20540001 RAL-802_95b 560 chr2R 20577071 20577120 chr2R 20577174 20577231 8 102 0.0 0.0 0.0 8.0 160 chr2R 20577071 intron qsm - chr2R 20577151 intron qsm - chr2R 20577231 intron qsm - chr2R_8_20575001 chr2R_20575001 RAL-802_95b 561 chr2R 20830523 20830566 chr2R 20830616 20830665 10 95 2.0 2.0 2.0 3.3 142 chr2R 20830523 intron,intron insc -,sktl - chr2R 20830594 intron,intron insc -,sktl - chr2R 20830665 intron,intron insc -,sktl - chr2R_10_20830001 chr2R_20830001 RAL-802_95b 562 chr2R 20842880 20842920 chr2R 20842983 20843023 9 100 3.5 2.0 2.8 2.4 143 chr2R 20842880 intergenic not near genes chr2R 20842952 intergenic not near genes chr2R 20843023 intergenic not near genes chr2R_9_20840001 chr2R_20840001 RAL-802_95b 563 chr2R 20951020 20951063 chr2R 20951111 20951145 6 86 2.0 1.0 1.5 2.4 125 chr2R 20951020 3` UTR CG33704 + chr2R 20951082 3` UTR CG33704 + chr2R 20951145 intergenic CG33704 + chr2R_6_20950001 chr2R_20950001 RAL-802_95b 564 chr2R 21033952 21034004 chr2R 21034059 21034096 9 103 1.5 3.0 2.2 2.8 144 chr2R 21033952 intergenic not near genes chr2R 21034024 intergenic not near genes chr2R 21034096 intergenic not near genes chr2R_9_21030001 chr2R_21030001 RAL-802_95b 565 chr2R 21055170 21055199 chr2R 21055344 21055373 6 171 5.0 4.0 4.5 1.1 203 chr2R 21055170 intron shg - chr2R 21055272 intron shg - chr2R 21055373 intron shg - chr2R_6_21055001 chr2R_21055001 RAL-802_95b 566 chr2R 21075679 21075692 chr2R 21075785 21075799 4 106 1.5 2.5 2.0 1.3 120 chr2R 21075679 intron Treh + chr2R 21075739 intron Treh + chr2R 21075799 intron Treh + chr2R_4_21075001 chr2R_21075001 RAL-802_95b 567 chr2R 21117458 21117493 chr2R 21117834 21117850 8 371 1.5 0.5 1.0 4.0 392 chr2R 21117458 intron ktub + chr2R 21117654 intron ktub + chr2R 21117850 intron ktub + chr2R_8_21115001 chr2R_21115001 RAL-802_95b 568 chr2R 21540683 21540694 chr2R 21540906 21540932 6 235 2.0 2.0 2.0 2.0 249 chr2R 21540683 intron Egfr + chr2R 21540808 intron Egfr + chr2R 21540932 intron Egfr + chr2R_6_21540001 chr2R_21540001 RAL-802_95b 569 chr2R 21585220 21585243 chr2R 21585319 21585335 5 98 0.5 3.0 1.8 1.8 115 chr2R 21585220 3` UTR CG30222 + chr2R 21585278 3` UTR CG30222 + chr2R 21585335 3` UTR CG30222 + chr2R_5_21585001 chr2R_21585001 RAL-802_95b 570 chr2R 21726682 21726685 chr2R 21726800 21726803 4 118 6.0 0.0 3.0 1.0 121 chr2R 21726682 intergenic not near genes chr2R 21726742 intergenic not near genes chr2R 21726803 intergenic not near genes chr2R_4_21725001 chr2R_21725001 RAL-802_95b 571 chr2R 21753079 21753106 chr2R 21753574 21753601 roo 8 501 3.5 5.0 4.2 1.5 522 chr2R 21753079 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753601 intergenic not near genes chr2R_8_21750001 chr2R_21750001 RAL-802_95b 572 chr2R 21809509 21809550 chr2R 21817769 21817810 roo 8 8252 4.0 3.5 3.8 1.7 8301 chr2R 21809509 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817810 intergenic not near genes chr2R_8_21810001 chr2R_21810001 RAL-802_95b 573 chr2R 21906255 21906302 chr2R 21906376 21906423 5 121 0.5 0.5 0.5 3.3 168 chr2R 21906255 intron Fili + chr2R 21906339 intron Fili + chr2R 21906423 intron Fili + chr2R_5_21905001 chr2R_21905001 RAL-802_95b 574 chr2R 21938085 21938227 chr2R 21938182 21938329 12 97 0.0 0.0 0.0 12.0 244 chr2R 21938085 intron Fili + chr2R 21938207 intron Fili + chr2R 21938329 intron Fili + chr2R_12_21935001 chr2R_21935001 RAL-802_95b 575 chr2R 22009067 22009079 chr2R 22009153 22009180 5 98 0.5 5.5 3.0 1.2 113 chr2R 22009067 intron CG34370 - chr2R 22009124 intron CG34370 - chr2R 22009180 intron CG34370 - chr2R_5_22005001 chr2R_22005001 RAL-802_95b 576 chr2R 22009766 22009808 chr2R 22009852 22009904 6 89 1.0 1.5 1.2 2.7 138 chr2R 22009766 intron CG34370 - chr2R 22009835 intron CG34370 - chr2R 22009904 intron CG34370 - chr2R_6_22005001 chr2R_22005001 RAL-802_95b 577 chr2R 22095572 22095616 chr2R 22095671 22095716 8 92 1.0 0.0 0.5 5.3 144 chr2R 22095572 intron CG11073 - chr2R 22095644 intron CG11073 - chr2R 22095716 intron CG11073 - chr2R_8_22095001 chr2R_22095001 RAL-802_95b 578 chr2R 22185676 22185702 chr2R 22185795 22185805 5 114 0.0 1.0 0.5 3.3 129 chr2R 22185676 3` UTR MED16 + chr2R 22185740 3` UTR MED16 + chr2R 22185805 3` UTR MED16 + chr2R_5_22185001 chr2R_22185001 RAL-802_95b 579 chr2R 22292177 22292208 chr2R 22292386 22292412 6 207 0.5 6.5 3.5 1.3 235 chr2R 22292177 5` UTR CR43422 + chr2R 22292294 5` UTR CR43422 + chr2R 22292412 intergenic CR43422 + chr2R_6_22290001 chr2R_22290001 RAL-802_95b 580 chr2R 22349674 22349718 chr2R 22351478 22351522 jockey 7 1798 2.0 1.0 1.5 2.8 1848 chr2R 22349674 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351522 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-802_95b 581 chr2R 22691765 22691773 chr2R 22691856 22691884 6 106 1.0 1.5 1.2 2.7 119 chr2R 22691765 5` UTR CR44764 + chr2R 22691824 5` UTR CR44764 + chr2R 22691884 5` UTR CR44764 + chr2R_6_22690001 chr2R_22690001 RAL-802_95b 582 chr2R 22723220 22723266 chr2R 22723314 22723362 9 96 1.0 1.0 1.0 4.5 142 chr2R 22723220 intron jbug - chr2R 22723291 intron jbug - chr2R 22723362 intron jbug - chr2R_9_22720001 chr2R_22720001 RAL-802_95b 583 chr2R 22774958 22774982 chr2R 22775386 22775421 jockey 5 436 6.0 4.5 5.2 0.8 463 chr2R 22774958 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775421 intron CG42260 - chr2R_5_22775001 chr2R_22775001 RAL-802_95b 584 chr2R 22794309 22794327 chr2R 22794385 22794434 7 99 1.5 2.5 2.0 2.3 125 chr2R 22794309 intron CG42260 - chr2R 22794372 intron CG42260 - chr2R 22794434 intron CG42260 - chr2R_7_22790001 chr2R_22790001 RAL-802_95b 585 chr2R 22945049 22945078 chr2R 22945168 22945212 8 127 4.5 5.5 5.0 1.3 163 chr2R 22945049 exon CG42694 + chr2R 22945130 3` UTR CG42694 + chr2R 22945212 intergenic CG42694 + chr2R_8_22945001 chr2R_22945001 RAL-802_95b 586 chr2R 23052637 23052672 chr2R 23052733 23052768 4 96 1.0 3.5 2.2 1.2 131 chr2R 23052637 intergenic not near genes chr2R 23052702 intergenic not near genes chr2R 23052768 intergenic not near genes chr2R_4_23050001 chr2R_23050001 RAL-802_95b 587 chr2R 23061746 23061788 chr2R 23061830 23061875 4 91 2.5 3.0 2.8 1.1 129 chr2R 23061746 3` UTR l(2)06496 - chr2R 23061810 3` UTR l(2)06496 - chr2R 23061875 3` UTR l(2)06496 - chr2R_4_23060001 chr2R_23060001 RAL-802_95b 588 chr2R 23131352 23131363 chr2R 23131473 23131484 5 121 1.5 3.0 2.2 1.6 132 chr2R 23131352 intergenic not near genes chr2R 23131418 intergenic not near genes chr2R 23131484 intergenic not near genes chr2R_5_23130001 chr2R_23130001 RAL-802_95b 589 chr2R 23131365 23131371 chr2R 23131469 23131492 5 117 0.5 2.5 1.5 2.0 127 chr2R 23131365 intergenic not near genes chr2R 23131428 intergenic not near genes chr2R 23131492 intergenic not near genes chr2R_5_23130001 chr2R_23130001 RAL-802_95b 590 chr2R 23356259 23356307 chr2R 23356368 23356416 8 98 2.0 1.5 1.8 2.9 157 chr2R 23356259 3` UTR Rpi + chr2R 23356338 3` UTR Rpi + chr2R 23356416 3` UTR,3` UTR Rpi +,CG3500 - chr2R_8_23355001 chr2R_23355001 RAL-802_95b 591 chr2R 23423741 23423774 chr2R 23423904 23423952 5 170 1.0 2.5 1.8 1.8 211 chr2R 23423741 intron CG9815 - chr2R 23423846 intron CG9815 - chr2R 23423952 intron CG9815 - chr2R_5_23420001 chr2R_23420001 RAL-802_95b 592 chr2R 23553713 23553722 chr2R 23553813 23553832 5 106 8.0 5.0 6.5 0.7 119 chr2R 23553713 intron pita - chr2R 23553772 intron pita - chr2R 23553832 intron pita - chr2R_5_23550001 chr2R_23550001 RAL-802_95b 593 chr2R 23554915 23554944 chr2R 23555009 23555022 9 100 2.5 2.5 2.5 2.6 107 chr2R 23554915 intergenic Rrp4 -,pita - chr2R 23554968 intergenic Rrp4 -,pita - chr2R 23555022 3` UTR Rrp4 - chr2R_9_23550001 chr2R_23550001 RAL-802_95b 594 chr2R 23607023 23607190 chr2R 23607119 23607303 17 101 1.5 1.5 1.5 6.8 280 chr2R 23607023 intron CG17664 - chr2R 23607163 intron CG17664 - chr2R 23607303 intron CG17664 - chr2R_17_23605001 chr2R_23605001 RAL-802_95b 595 chr2R 23914316 23914331 chr2R 23921935 23921975 412 4 7624 1.0 3.5 2.2 1.2 7659 chr2R 23914316 exon kcc + chr2R 23918146 intron kcc + chr2R 23921975 exon kcc + chr2R_4_23915001 chr2R_23915001 RAL-802_95b 596 chr2R 23986494 23986547 chr2R 23986594 23986647 11 91 1.0 3.5 2.2 3.4 153 chr2R 23986494 intron Phm - chr2R 23986570 intron Phm - chr2R 23986647 intron,5` UTR Phm -,CG30178 + chr2R_11_23985001 chr2R_23985001 RAL-802_95b 597 chr2R 24077927 24077953 chr2R 24078008 24078047 6 88 1.5 2.5 2.0 2.0 120 chr2R 24077927 3` UTR Mlp60A + chr2R 24077987 3` UTR Mlp60A + chr2R 24078047 3` UTR Mlp60A + chr2R_6_24075001 chr2R_24075001 RAL-802_95b 598 chr2R 24177215 24177265 chr2R 24184720 24184770 412 11 7504 7.0 4.0 5.5 1.7 7555 chr2R 24177215 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184770 3` UTR Nop60B + chr2R_11_24180001 chr2R_24180001 RAL-802_95b 599 chr2R 24351397 24351433 chr2R 24351498 24351534 5 101 3.0 1.0 2.0 1.7 137 chr2R 24351397 intron bs + chr2R 24351466 intron bs + chr2R 24351534 intron,3` UTR bs +,CR44811 - chr2R_5_24350001 chr2R_24350001 RAL-802_95b 600 chr2R 24353408 24353458 chr2R 24361790 24361807 roo 5 8375 1.0 1.5 1.2 2.3 8399 chr2R 24353408 intron,intron bs +,CR44811 - chr2R 24357608 intron,intron bs +,CR44811 - chr2R 24361807 intron,intron bs +,CR44811 - chr2R_5_24355001 chr2R_24355001 RAL-802_95b 601 chr2R 24449916 24449933 chr2R 24450020 24450037 6 103 1.0 1.5 1.2 2.7 121 chr2R 24449916 intergenic not near genes chr2R 24449976 intergenic not near genes chr2R 24450037 intergenic not near genes chr2R_6_24445001 chr2R_24445001 RAL-802_95b 602 chr2R 24509737 24509761 chr2R 24509842 24509866 7 101 3.5 4.0 3.8 1.5 129 chr2R 24509737 3` UTR Letm1 - chr2R 24509802 3` UTR Letm1 - chr2R 24509866 3` UTR Letm1 - chr2R_7_24505001 chr2R_24505001 RAL-802_95b 603 chr2R 24636886 24636927 chr2R 24636992 24636997 5 97 2.5 0.0 1.2 2.3 111 chr2R 24636886 intron CG13594 - chr2R 24636942 intron CG13594 - chr2R 24636997 intron CG13594 - chr2R_5_24635001 chr2R_24635001 RAL-802_95b 604 chr2R 24638817 24638837 chr2R 24639101 24639110 4 280 1.5 0.5 1.0 2.0 293 chr2R 24638817 intergenic CG13594 - chr2R 24638964 intergenic CG13594 - chr2R 24639110 intergenic not near genes chr2R_4_24635001 chr2R_24635001 RAL-802_95b 605 chr2R 24956773 24956825 chr2R 24956996 24957036 8 218 1.5 1.5 1.5 3.2 263 chr2R 24956773 3` UTR CR44830 - chr2R 24956904 3` UTR CR44830 - chr2R 24957036 3` UTR CR44830 - chr2R_8_24955001 chr2R_24955001 RAL-802_95b 606 chr2R 25101259 25101296 chr2R 25101381 25101413 7 121 3.0 1.0 2.0 2.3 154 chr2R 25101259 intron lov - chr2R 25101336 intron lov - chr2R 25101413 intron lov - chr2R_7_25100001 chr2R_25100001 RAL-802_95b 607 chr2R 25102506 25102549 chr2R 25102695 25102738 6 183 0.0 1.5 0.8 3.3 232 chr2R 25102506 intron lov - chr2R 25102622 intron lov - chr2R 25102738 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-802_95b 608 chr2R 25104758 25104798 chr2R 25104903 25104943 6 140 0.5 3.0 1.8 2.1 185 chr2R 25104758 intron lov - chr2R 25104850 intron lov - chr2R 25104943 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-802_95b 609 chr2R 25131002 25131046 chr2R 25131089 25131122 7 88 1.0 3.5 2.2 2.2 120 chr2R 25131002 intron lov - chr2R 25131062 intron lov - chr2R 25131122 intron lov - chr2R_7_25130001 chr2R_25130001 RAL-802_95b 610 chr2R 25175377 25175417 chr2R 25175480 25175495 5 89 2.5 0.5 1.5 2.0 118 chr2R 25175377 3` UTR Peb - chr2R 25175436 3` UTR Peb - chr2R 25175495 3` UTR Peb - chr2R_5_25175001 chr2R_25175001 RAL-802_95b 611 chr2R 25191712 25191716 chr2R 25191810 25191814 5 98 5.0 4.0 4.5 0.9 102 chr2R 25191712 intron CG9380 - chr2R 25191763 intron CG9380 - chr2R 25191814 intron CG9380 - chr2R_5_25190001 chr2R_25190001 RAL-802_95b 612 chr2R 25193321 25193370 chr2R 25193483 25193516 6 160 2.0 1.5 1.8 2.1 195 chr2R 25193321 intron CG9380 - chr2R 25193418 intron CG9380 - chr2R 25193516 intron CG9380 - chr2R_6_25190001 chr2R_25190001 RAL-802_95b 613 chr2R 25234776 25234798 chr2R 25234856 25234874 5 88 0.5 2.0 1.2 2.3 98 chr2R 25234776 intron CG9380 - chr2R 25234825 intron CG9380 - chr2R 25234874 intron CG9380 - chr2R_5_25230001 chr2R_25230001 RAL-802_95b 614 chr3L 110194 110241 chr3L 119381 119402 roo 8 9180 4.5 1.5 3.0 2.0 9208 chr3L 110194 intergenic not near genes chr3L 114798 intergenic not near genes chr3L 119402 intergenic not near genes chr3L_8_110001 chr3L_110001 RAL-802_95b 615 chr3L 365522 365557 chr3L 365613 365658 7 97 1.0 2.0 1.5 2.8 136 chr3L 365522 3` UTR CG1233 + chr3L 365590 3` UTR CG1233 + chr3L 365658 3` UTR CG1233 + chr3L_7_365001 chr3L_365001 RAL-802_95b 616 chr3L 402687 402709 chr3L 409744 409782 297 4 7064 0.0 2.0 1.0 2.0 7095 chr3L 402687 intergenic not near genes chr3L 406234 intergenic not near genes chr3L 409782 intergenic not near genes chr3L_4_405001 chr3L_405001 RAL-802_95b 617 chr3L 491625 491664 chr3L 491727 491757 6 100 3.5 2.0 2.8 1.6 132 chr3L 491625 intron klar - chr3L 491691 intron klar - chr3L 491757 intron klar - chr3L_6_490001 chr3L_490001 RAL-802_95b 618 chr3L 563953 564001 chr3L 564152 564200 9 193 2.5 5.0 3.8 1.9 247 chr3L 563953 intron hipk + chr3L 564076 intron hipk + chr3L 564200 intron hipk + chr3L_9_560001 chr3L_560001 RAL-802_95b 619 chr3L 642454 642497 chr3L 642560 642608 4 110 3.0 3.0 3.0 1.0 154 chr3L 642454 5` UTR CR43334 + chr3L 642531 5` UTR CR43334 + chr3L 642608 5` UTR CR43334 + chr3L_4_640001 chr3L_640001 RAL-802_95b 620 chr3L 651384 651424 chr3L 651492 651522 6 106 1.5 6.0 3.8 1.2 138 chr3L 651384 intergenic Gale +,CG3402 - chr3L 651453 intergenic CG3402 -,Gale + chr3L 651522 intergenic CG3402 -,Gale + chr3L_6_650001 chr3L_650001 RAL-802_95b 621 chr3L 705879 705926 chr3L 705995 706042 13 113 2.0 1.0 1.5 5.2 163 chr3L 705879 intergenic CG13895 -,CR44514 + chr3L 705960 3` UTR CG13895 - chr3L 706042 3` UTR CG13895 - chr3L_13_705001 chr3L_705001 RAL-802_95b 622 chr3L 789899 789931 chr3L 790404 790436 roo 8 505 4.5 1.5 3.0 2.0 537 chr3L 789899 intergenic not near genes chr3L 790168 intergenic not near genes chr3L 790436 intergenic not near genes chr3L_8_790001 chr3L_790001 RAL-802_95b 623 chr3L 811056 811097 chr3L 811297 811338 8 239 4.5 4.0 4.2 1.5 282 chr3L 811056 intergenic not near genes chr3L 811197 intergenic not near genes chr3L 811338 intergenic not near genes chr3L_8_810001 chr3L_810001 RAL-802_95b 624 chr3L 900007 900015 chr3L 900096 900119 4 100 0.0 3.5 1.8 1.4 112 chr3L 900007 intergenic not near genes chr3L 900063 intergenic not near genes chr3L 900119 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-802_95b 625 chr3L 925158 925210 chr3L 932604 932646 mdg1 7 7435 2.0 4.5 3.2 1.7 7488 chr3L 925158 intron Glut1 + chr3L 928902 intron Glut1 + chr3L 932646 intron Glut1 + chr3L_7_925001 chr3L_925001 RAL-802_95b 626 chr3L 933916 933943 chr3L 934033 934066 7 121 2.5 3.0 2.8 1.8 150 chr3L 933916 intron Glut1 + chr3L 933991 intron Glut1 + chr3L 934066 intron Glut1 + chr3L_7_930001 chr3L_930001 RAL-802_95b 627 chr3L 939765 939802 chr3L 940906 940918 jockey 7 1134 2.0 4.0 3.0 1.8 1153 chr3L 939765 intron Glut1 + chr3L 940342 intron Glut1 + chr3L 940918 intron Glut1 + chr3L_7_940001 chr3L_940001 RAL-802_95b 628 chr3L 960998 961040 chr3L 961111 961138 14 111 1.5 3.5 2.5 4.0 140 chr3L 960998 intron Glut1 + chr3L 961068 intron Glut1 + chr3L 961138 intron Glut1 + chr3L_14_960001 chr3L_960001 RAL-802_95b 629 chr3L 1042942 1042987 chr3L 1043040 1043084 9 95 3.5 2.0 2.8 2.4 142 chr3L 1042942 intron bab1 - chr3L 1043013 intron bab1 - chr3L 1043084 intron bab1 - chr3L_9_1040001 chr3L_1040001 RAL-802_95b 630 chr3L 1154123 1154151 chr3L 1163293 1163321 roo 4 9170 1.5 1.0 1.2 1.8 9198 chr3L 1154123 intron bab2 - chr3L 1158722 intron bab2 - chr3L 1163321 intron bab2 - chr3L_4_1155001 chr3L_1155001 RAL-802_95b 631 chr3L 1154152 1154160 chr3L 1163289 1163322 roo 4 9154 1.0 1.0 1.0 2.0 9170 chr3L 1154152 intron bab2 - chr3L 1158737 intron bab2 - chr3L 1163322 intron bab2 - chr3L_4_1155001 chr3L_1155001 RAL-802_95b 632 chr3L 1189620 1189644 chr3L 1189726 1189750 4 104 0.5 3.5 2.0 1.3 130 chr3L 1189620 5` UTR CG13912 + chr3L 1189685 5` UTR CG13912 + chr3L 1189750 5` UTR CG13912 + chr3L_4_1185001 chr3L_1185001 RAL-802_95b 633 chr3L 1260125 1260161 chr3L 1260225 1260261 8 97 2.0 3.0 2.5 2.3 136 chr3L 1260125 intron CG9134 + chr3L 1260193 intron CG9134 + chr3L 1260261 intron CG9134 + chr3L_8_1260001 chr3L_1260001 RAL-802_95b 634 chr3L 1385198 1385208 chr3L 1385276 1385316 8 101 1.0 2.0 1.5 3.2 118 chr3L 1385198 intron,intron Ptp61F -,ru + chr3L 1385257 intron,intron Ptp61F -,ru + chr3L 1385316 intron,intron Ptp61F -,ru + chr3L_8_1385001 chr3L_1385001 RAL-802_95b 635 chr3L 1571467 1571494 chr3L 1571571 1571593 13 102 2.5 7.5 5.0 2.2 126 chr3L 1571467 intron CG12004 + chr3L 1571530 intron CG12004 + chr3L 1571593 intron CG12004 + chr3L_13_1570001 chr3L_1570001 RAL-802_95b 636 chr3L 1674342 1674354 chr3L 1674415 1674431 4 83 0.5 1.5 1.0 2.0 89 chr3L 1674342 intergenic CG7991 + chr3L 1674386 intergenic CG7991 + chr3L 1674431 intergenic CG7991 + chr3L_4_1670001 chr3L_1670001 RAL-802_95b 637 chr3L 1726592 1726640 chr3L 1726692 1726715 7 96 2.5 1.0 1.8 2.5 123 chr3L 1726592 intron drpr - chr3L 1726654 intron drpr - chr3L 1726715 intron drpr - chr3L_7_1725001 chr3L_1725001 RAL-802_95b 638 chr3L 1740853 1740883 chr3L 1741102 1741148 pogo 5 261 2.5 3.5 3.0 1.2 295 chr3L 1740853 intron Gk + chr3L 1741000 intron Gk + chr3L 1741148 intron Gk + chr3L_5_1740001 chr3L_1740001 RAL-802_95b 639 chr3L 1932057 1932075 chr3L 1932168 1932186 4 108 4.0 2.0 3.0 1.0 129 chr3L 1932057 intron Dbx + chr3L 1932122 intron Dbx + chr3L 1932186 intron Dbx + chr3L_4_1930001 chr3L_1930001 RAL-802_95b 640 chr3L 1988818 1988862 chr3L 1989017 1989061 5 196 0.0 0.0 0.0 5.0 243 chr3L 1988818 intergenic not near genes chr3L 1988940 intergenic not near genes chr3L 1989061 intergenic not near genes chr3L_5_1985001 chr3L_1985001 RAL-802_95b 641 chr3L 2108245 2108273 chr3L 2113461 2113497 copia 7 5223 2.0 2.5 2.2 2.2 5252 chr3L 2108245 intron sls - chr3L 2110871 intron sls - chr3L 2113497 intron sls - chr3L_7_2110001 chr3L_2110001 RAL-802_95b 642 chr3L 2139192 2139228 chr3L 2139293 2139329 8 101 4.0 1.0 2.5 2.3 137 chr3L 2139192 intron zormin - chr3L 2139260 intron zormin - chr3L 2139329 intron zormin - chr3L_8_2135001 chr3L_2135001 RAL-802_95b 643 chr3L 2168758 2168798 chr3L 2168869 2168908 8 110 2.5 1.0 1.8 2.9 150 chr3L 2168758 exon CG15879 - chr3L 2168833 intron CG15879 - chr3L 2168908 intron CG15879 - chr3L_8_2165001 chr3L_2165001 RAL-802_95b 644 chr3L 2307991 2308018 chr3L 2308117 2308134 5 124 3.5 5.0 4.2 1.0 143 chr3L 2307991 intergenic not near genes chr3L 2308062 intergenic not near genes chr3L 2308134 intergenic not near genes chr3L_5_2305001 chr3L_2305001 RAL-802_95b 645 chr3L 2380337 2380347 chr3L 2380429 2380434 6 94 3.5 2.5 3.0 1.5 97 chr3L 2380337 intergenic not near genes chr3L 2380386 intergenic not near genes chr3L 2380434 intergenic not near genes chr3L_6_2380001 chr3L_2380001 RAL-802_95b 646 chr3L 2546744 2546746 chr3L 2546853 2546855 4 109 5.5 0.0 2.8 1.1 111 chr3L 2546744 intron Spn - chr3L 2546800 intron Spn - chr3L 2546855 intron Spn - chr3L_4_2545001 chr3L_2545001 RAL-802_95b 647 chr3L 2683938 2683975 chr3L 2684034 2684071 6 93 2.5 3.0 2.8 1.6 133 chr3L 2683938 intron Fife - chr3L 2684004 intron Fife - chr3L 2684071 intron Fife - chr3L_6_2680001 chr3L_2680001 RAL-802_95b 648 chr3L 2751451 2751473 chr3L 2755756 2755768 F-element 4 4308 7.0 3.5 5.2 0.6 4317 chr3L 2751451 intron Mrtf - chr3L 2753610 intron Mrtf - chr3L 2755768 intron Mrtf - chr3L_4_2750001 chr3L_2750001 RAL-802_95b 649 chr3L 2795720 2795747 chr3L 2795849 2795889 5 131 1.0 1.0 1.0 2.5 169 chr3L 2795720 intron CG43444 - chr3L 2795804 intron CG43444 - chr3L 2795889 intron CG43444 - chr3L_5_2795001 chr3L_2795001 RAL-802_95b 650 chr3L 2863788 2863803 chr3L 2863888 2863897 5 98 3.5 0.5 2.0 1.7 109 chr3L 2863788 intron CG43444 - chr3L 2863842 intron CG43444 - chr3L 2863897 intron CG43444 - chr3L_5_2860001 chr3L_2860001 RAL-802_95b 651 chr3L 2908151 2908179 chr3L 2908252 2908293 6 114 2.5 1.5 2.0 2.0 142 chr3L 2908151 intron Shab + chr3L 2908222 intron Shab + chr3L 2908293 intron Shab + chr3L_6_2905001 chr3L_2905001 RAL-802_95b 652 chr3L 2966712 2966719 chr3L 2974157 2974164 mdg1 5 7445 8.0 5.5 6.8 0.6 7452 chr3L 2966712 intergenic not near genes chr3L 2970438 intergenic not near genes chr3L 2974164 intergenic not near genes chr3L_5_2970001 chr3L_2970001 RAL-802_95b 653 chr3L 2987700 2987729 chr3L 2987792 2987825 7 92 0.5 0.5 0.5 4.7 125 chr3L 2987700 intergenic not near genes chr3L 2987762 intergenic not near genes chr3L 2987825 intergenic not near genes chr3L_7_2985001 chr3L_2985001 RAL-802_95b 654 chr3L 3051723 3051745 chr3L 3051985 3051987 pogo 4 257 11.5 0.0 5.8 0.6 264 chr3L 3051723 3` UTR CG32485 + chr3L 3051855 intergenic CG32485 + chr3L 3051987 intergenic CG32485 + chr3L_4_3050001 chr3L_3050001 RAL-802_95b 655 chr3L 3138967 3139009 chr3L 3139065 3139118 13 102 3.0 4.5 3.8 2.7 151 chr3L 3138967 intron CG11537 - chr3L 3139042 intron CG11537 - chr3L 3139118 intron CG11537 - chr3L_13_3135001 chr3L_3135001 RAL-802_95b 656 chr3L 3259617 3259637 chr3L 3259731 3259752 4 113 3.0 4.0 3.5 0.9 135 chr3L 3259617 intron ckd + chr3L 3259684 intron ckd + chr3L 3259752 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-802_95b 657 chr3L 3259639 3259648 chr3L 3259719 3259742 4 96 1.5 3.5 2.5 1.1 103 chr3L 3259639 intron ckd + chr3L 3259690 intron ckd + chr3L 3259742 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-802_95b 658 chr3L 3259650 3259821 chr3L 3259714 3259941 4 105 1.0 3.5 2.2 1.2 291 chr3L 3259650 intron ckd + chr3L 3259796 intron ckd + chr3L 3259941 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-802_95b 659 chr3L 3314138 3314156 chr3L 3314277 3314310 5 142 9.0 7.5 8.2 0.5 172 chr3L 3314138 intergenic ZnT63C +,Drsl2 + chr3L 3314224 intergenic Drsl2 +,ZnT63C + chr3L 3314310 intergenic Drsl2 +,ZnT63C + chr3L_5_3310001 chr3L_3310001 RAL-802_95b 660 chr3L 3315990 3316010 chr3L 3316111 3316114 4 116 3.5 6.5 5.0 0.7 124 chr3L 3315990 intergenic Drsl4 + chr3L 3316052 intergenic Drsl4 + chr3L 3316114 intergenic Drsl4 + chr3L_4_3315001 chr3L_3315001 RAL-802_95b 661 chr3L 3470147 3470188 chr3L 3470243 3470273 5 94 0.0 3.0 1.5 2.0 126 chr3L 3470147 intron CG14971 - chr3L 3470210 intron CG14971 - chr3L 3470273 intron CG14971 - chr3L_5_3470001 chr3L_3470001 RAL-802_95b 662 chr3L 3475072 3475100 chr3L 3475532 3475558 jockey 6 454 0.5 1.5 1.0 3.0 486 chr3L 3475072 intron CG42324 + chr3L 3475315 intron CG42324 + chr3L 3475558 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-802_95b 663 chr3L 3483536 3483570 chr3L 3483763 3483797 9 223 3.0 4.5 3.8 1.9 261 chr3L 3483536 intron CG42324 + chr3L 3483666 intron CG42324 + chr3L 3483797 intron CG42324 + chr3L_9_3480001 chr3L_3480001 RAL-802_95b 664 chr3L 3484271 3484311 chr3L 3484383 3484423 10 112 2.5 3.0 2.8 2.6 152 chr3L 3484271 intron,exon CG42324 +,CG43074 - chr3L 3484347 intron,exon CG42324 +,CG43074 - chr3L 3484423 intron,intron CG42324 +,CG43074 - chr3L_10_3480001 chr3L_3480001 RAL-802_95b 665 chr3L 3494183 3494200 chr3L 3494280 3494297 4 97 0.5 1.5 1.0 2.0 114 chr3L 3494183 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494297 intron CG42324 + chr3L_4_3490001 chr3L_3490001 RAL-802_95b 666 chr3L 3566377 3566428 chr3L 3566480 3566510 17 98 1.5 2.5 2.0 5.7 133 chr3L 3566377 intron Eip63E + chr3L 3566444 intron Eip63E + chr3L 3566510 intron Eip63E + chr3L_17_3565001 chr3L_3565001 RAL-802_95b 667 chr3L 3580245 3580293 chr3L 3580540 3580578 11 293 2.0 2.5 2.2 3.4 333 chr3L 3580245 intron Eip63E + chr3L 3580412 intron Eip63E + chr3L 3580578 intron Eip63E + chr3L_11_3580001 chr3L_3580001 RAL-802_95b 668 chr3L 3601283 3601332 chr3L 3606614 3606663 copia 7 5329 0.0 4.0 2.0 2.3 5380 chr3L 3601283 intron Eip63E + chr3L 3603973 intron Eip63E + chr3L 3606663 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-802_95b 669 chr3L 3627215 3627262 chr3L 3627340 3627382 8 116 0.0 3.5 1.8 2.9 167 chr3L 3627215 intron dar1 + chr3L 3627298 intron dar1 + chr3L 3627382 intron dar1 + chr3L_8_3625001 chr3L_3625001 RAL-802_95b 670 chr3L 3670546 3670589 chr3L 3670653 3670687 12 104 1.0 0.5 0.8 6.7 141 chr3L 3670546 intergenic not near genes chr3L 3670616 intergenic not near genes chr3L 3670687 intergenic not near genes chr3L_12_3670001 chr3L_3670001 RAL-802_95b 671 chr3L 3766728 3766746 chr3L 3766824 3766852 6 104 4.5 0.5 2.5 1.7 124 chr3L 3766728 intron CG32264 - chr3L 3766790 intron CG32264 - chr3L 3766852 intron CG32264 - chr3L_6_3765001 chr3L_3765001 RAL-802_95b 672 chr3L 3815048 3815075 chr3L 3815134 3815141 10 93 2.5 3.5 3.0 2.5 93 chr3L 3815048 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815094 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815141 intron,intron Scsalpha +,CR43932 - chr3L_10_3815001 chr3L_3815001 RAL-802_95b 673 chr3L 3849457 3849471 chr3L 3849555 3849569 5 97 3.0 2.5 2.8 1.3 112 chr3L 3849457 intron Awh + chr3L 3849513 intron Awh + chr3L 3849569 intron Awh + chr3L_5_3845001 chr3L_3845001 RAL-802_95b 674 chr3L 3889112 3889146 chr3L 3889215 3889247 4 100 0.0 0.5 0.2 3.3 135 chr3L 3889112 intergenic not near genes chr3L 3889180 intergenic not near genes chr3L 3889247 intergenic not near genes chr3L_4_3885001 chr3L_3885001 RAL-802_95b 675 chr3L 3926010 3926014 chr3L 3926123 3926127 4 113 5.0 0.5 2.8 1.1 117 chr3L 3926010 intron Eip63F-1 - chr3L 3926068 intron Eip63F-1 - chr3L 3926127 intron Eip63F-1 - chr3L_4_3925001 chr3L_3925001 RAL-802_95b 676 chr3L 3926018 3926037 chr3L 3926121 3926145 7 111 2.5 0.5 1.5 2.8 127 chr3L 3926018 intron Eip63F-1 - chr3L 3926082 intron Eip63F-1 - chr3L 3926145 intron Eip63F-1 - chr3L_7_3925001 chr3L_3925001 RAL-802_95b 677 chr3L 3935817 3935846 chr3L 3935915 3935944 10 98 0.0 4.0 2.0 3.3 127 chr3L 3935817 5` UTR Eip63F-2 + chr3L 3935880 5` UTR Eip63F-2 + chr3L 3935944 5` UTR Eip63F-2 + chr3L_10_3935001 chr3L_3935001 RAL-802_95b 678 chr3L 4146802 4146820 chr3L 4146904 4146922 5 102 1.0 3.0 2.0 1.7 120 chr3L 4146802 intergenic not near genes chr3L 4146862 intergenic not near genes chr3L 4146922 intergenic not near genes chr3L_5_4145001 chr3L_4145001 RAL-802_95b 679 chr3L 4328724 4328748 chr3L 4336242 4336266 412 4 7516 3.5 5.0 4.2 0.8 7542 chr3L 4328724 intron Cip4 - chr3L 4332495 intron Cip4 - chr3L 4336266 intron Cip4 - chr3L_4_4330001 chr3L_4330001 RAL-802_95b 680 chr3L 4364223 4364227 chr3L 4364309 4364336 5 102 1.5 6.0 3.8 1.0 113 chr3L 4364223 intergenic Cip4 -,mRpS6 + chr3L 4364280 intergenic Cip4 -,mRpS6 + chr3L 4364336 intergenic mRpS6 +,Cip4 - chr3L_5_4360001 chr3L_4360001 RAL-802_95b 681 chr3L 4901137 4901153 chr3L 4907316 4907358 diver 4 6201 4.5 1.0 2.8 1.1 6221 chr3L 4901137 intergenic CG13704 + chr3L 4904248 intergenic not near genes chr3L 4907358 intergenic not near genes chr3L_4_4900001 chr3L_4900001 RAL-802_95b 682 chr3L 4926089 4926124 chr3L 4926186 4926188 5 91 2.0 0.5 1.2 2.3 99 chr3L 4926089 intergenic not near genes chr3L 4926138 intergenic not near genes chr3L 4926188 intergenic not near genes chr3L_5_4925001 chr3L_4925001 RAL-802_95b 683 chr3L 4958441 4958446 chr3L 4958508 4958541 7 96 0.5 1.5 1.0 3.5 100 chr3L 4958441 intron Con - chr3L 4958491 intron Con - chr3L 4958541 intron Con - chr3L_7_4955001 chr3L_4955001 RAL-802_95b 684 chr3L 5034168 5034191 chr3L 5043310 5043358 roo 4 9163 1.5 4.5 3.0 1.0 9190 chr3L 5034168 intron Con - chr3L 5038763 intron Con - chr3L 5043358 intron Con - chr3L_4_5035001 chr3L_5035001 RAL-802_95b 685 chr3L 5045453 5045469 chr3L 5050254 5050270 Doc 4 4800 5.0 1.5 3.2 1.0 4817 chr3L 5045453 intron Con - chr3L 5047862 intron Con - chr3L 5050270 intron Con - chr3L_4_5045001 chr3L_5045001 RAL-802_95b 686 chr3L 5045472 5045480 chr3L 5050238 5050271 Doc 4 4783 3.5 1.5 2.5 1.1 4799 chr3L 5045472 intron Con - chr3L 5047872 intron Con - chr3L 5050271 intron Con - chr3L_4_5045001 chr3L_5045001 RAL-802_95b 687 chr3L 5104464 5104510 chr3L 5124618 5124664 11 20153 4.5 2.0 3.2 2.6 20200 chr3L 5104464 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124664 intergenic not near genes chr3L_11_5110001 chr3L_5110001 RAL-802_95b 688 chr3L 5229028 5229042 chr3L 5229469 5229483 5 441 3.0 4.5 3.8 1.0 455 chr3L 5229028 intron shep - chr3L 5229256 intron shep - chr3L 5229483 intron shep - chr3L_5_5225001 chr3L_5225001 RAL-802_95b 689 chr3L 5306653 5306671 chr3L 5306763 5306776 4 109 0.0 2.0 1.0 2.0 123 chr3L 5306653 intergenic not near genes chr3L 5306714 intergenic not near genes chr3L 5306776 intergenic not near genes chr3L_4_5305001 chr3L_5305001 RAL-802_95b 690 chr3L 5349364 5349410 chr3L 5349606 5349652 10 244 23.0 23.0 23.0 0.4 288 chr3L 5349364 intron lama - chr3L 5349508 intron lama - chr3L 5349652 intron lama - chr3L_10_5345001 chr3L_5345001 RAL-802_95b 691 chr3L 5427338 5427381 chr3L 5427960 5428003 12 620 4.0 2.0 3.0 3.0 665 chr3L 5427338 intron CG34391 + chr3L 5427670 intron CG34391 + chr3L 5428003 intron CG34391 + chr3L_12_5425001 chr3L_5425001 RAL-802_95b 692 chr3L 5521479 5521518 chr3L 5521588 5521617 14 104 4.0 1.5 2.8 3.7 138 chr3L 5521479 intron Lkr - chr3L 5521548 intron Lkr - chr3L 5521617 intron Lkr - chr3L_14_5520001 chr3L_5520001 RAL-802_95b 693 chr3L 5561643 5561692 chr3L 5561745 5561794 4 102 3.5 0.0 1.8 1.4 151 chr3L 5561643 intergenic sinu -,Sucb - chr3L 5561718 3` UTR Sucb - chr3L 5561794 3` UTR Sucb - chr3L_4_5560001 chr3L_5560001 RAL-802_95b 694 chr3L 5597794 5597831 chr3L 5597907 5597931 7 102 2.5 1.5 2.0 2.3 137 chr3L 5597794 intergenic CG5150 + chr3L 5597862 intergenic CG5150 + chr3L 5597931 intergenic not near genes chr3L_7_5595001 chr3L_5595001 RAL-802_95b 695 chr3L 5726870 5726893 chr3L 5726997 5727004 6 121 1.0 1.5 1.2 2.7 134 chr3L 5726870 intron sif + chr3L 5726937 intron sif + chr3L 5727004 intron sif + chr3L_6_5725001 chr3L_5725001 RAL-802_95b 696 chr3L 5910014 5910058 chr3L 5910275 5910319 pogo 8 259 6.5 3.5 5.0 1.3 305 chr3L 5910014 intron CG13288 + chr3L 5910166 intron CG13288 + chr3L 5910319 intron CG13288 + chr3L_8_5910001 chr3L_5910001 RAL-802_95b 697 chr3L 6001673 6001716 chr3L 6004383 6004431 jockey 10 2716 1.0 2.0 1.5 4.0 2758 chr3L 6001673 intron PVRAP + chr3L 6003052 intron PVRAP + chr3L 6004431 intron PVRAP + chr3L_10_6000001 chr3L_6000001 RAL-802_95b 698 chr3L 6028394 6028401 chr3L 6028470 6028519 5 97 3.0 2.5 2.8 1.3 125 chr3L 6028394 intergenic not near genes chr3L 6028456 intergenic not near genes chr3L 6028519 intergenic not near genes chr3L_5_6025001 chr3L_6025001 RAL-802_95b 699 chr3L 6142510 6142526 chr3L 6142721 6142757 4 226 3.0 4.0 3.5 0.9 247 chr3L 6142510 intergenic Cpr65Aw - chr3L 6142634 intergenic Cpr65Aw - chr3L 6142757 intergenic Cpr65Aw - chr3L_4_6140001 chr3L_6140001 RAL-802_95b 700 chr3L 6155709 6155713 chr3L 6155804 6155813 4 100 3.0 0.0 1.5 1.6 104 chr3L 6155709 intergenic not near genes chr3L 6155761 intergenic not near genes chr3L 6155813 intergenic not near genes chr3L_4_6155001 chr3L_6155001 RAL-802_95b 701 chr3L 6169115 6169132 chr3L 6169214 6169231 6 96 6.5 6.0 6.2 0.8 116 chr3L 6169115 3` UTR CG10289 - chr3L 6169173 3` UTR CG10289 - chr3L 6169231 3` UTR CG10289 - chr3L_6_6165001 chr3L_6165001 RAL-802_95b 702 chr3L 6220897 6220928 chr3L 6230069 6230100 roo 6 9166 2.0 2.0 2.0 2.0 9203 chr3L 6220897 5` UTR pncr008:3L + chr3L 6225498 intergenic not near genes chr3L 6230100 intergenic not near genes chr3L_6_6225001 chr3L_6225001 RAL-802_95b 703 chr3L 6334999 6335034 chr3L 6335480 6335525 297 6 484 1.0 2.0 1.5 2.4 526 chr3L 6334999 intron CG13300 - chr3L 6335262 intron CG13300 - chr3L 6335525 intron CG13300 - chr3L_6_6335001 chr3L_6335001 RAL-802_95b 704 chr3L 6405643 6405687 chr3L 6432127 6432171 roo 7 26483 2.0 4.0 3.0 1.8 26528 chr3L 6405643 intron CG42747 + chr3L 6418907 intron CG42747 + chr3L 6432171 intron CG42747 + chr3L_7_6415001 chr3L_6415001 RAL-802_95b 705 chr3L 6835910 6835922 chr3L 6836008 6836020 5 96 1.5 1.0 1.2 2.3 110 chr3L 6835910 intergenic not near genes chr3L 6835965 intergenic not near genes chr3L 6836020 intergenic not near genes chr3L_5_6835001 chr3L_6835001 RAL-802_95b 706 chr3L 6868698 6868743 chr3L 6868796 6868841 5 97 0.0 4.5 2.2 1.6 143 chr3L 6868698 intergenic not near genes chr3L 6868770 intergenic not near genes chr3L 6868841 intergenic not near genes chr3L_5_6865001 chr3L_6865001 RAL-802_95b 707 chr3L 6887505 6887531 chr3L 6895017 6895041 roo 5 7512 6.0 4.5 5.2 0.8 7536 chr3L 6887505 intergenic not near genes chr3L 6891273 intergenic not near genes chr3L 6895041 intergenic not near genes chr3L_5_6890001 chr3L_6890001 RAL-802_95b 708 chr3L 6934318 6934361 chr3L 6934449 6934492 6 131 1.0 2.0 1.5 2.4 174 chr3L 6934318 exon CG14820 + chr3L 6934405 intron CG14820 + chr3L 6934492 exon CG14820 + chr3L_6_6930001 chr3L_6930001 RAL-802_95b 709 chr3L 6955770 6955809 chr3L 6955870 6955902 5 93 3.5 1.0 2.2 1.6 132 chr3L 6955770 5` UTR CG10077 - chr3L 6955836 5` UTR CG10077 - chr3L 6955902 5` UTR CG10077 - chr3L_5_6955001 chr3L_6955001 RAL-802_95b 710 chr3L 6994907 6994917 chr3L 6995538 6995544 BS 4 630 0.5 5.0 2.8 1.1 637 chr3L 6994907 intergenic bin + chr3L 6995226 intergenic not near genes chr3L 6995544 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-802_95b 711 chr3L 7013437 7013472 chr3L 7013545 7013595 6 110 2.0 0.0 1.0 3.0 158 chr3L 7013437 intron Mp + chr3L 7013516 intron Mp + chr3L 7013595 intron Mp + chr3L_6_7010001 chr3L_7010001 RAL-802_95b 712 chr3L 7112562 7112604 chr3L 7112669 7112705 9 103 2.5 2.5 2.5 2.6 143 chr3L 7112562 intron form3 + chr3L 7112634 intron form3 + chr3L 7112705 intron form3 + chr3L_9_7110001 chr3L_7110001 RAL-802_95b 713 chr3L 7175644 7175666 chr3L 7175909 7175933 4 268 1.5 0.5 1.0 2.0 289 chr3L 7175644 intron Dscam2 - chr3L 7175788 intron Dscam2 - chr3L 7175933 intron Dscam2 - chr3L_4_7175001 chr3L_7175001 RAL-802_95b 714 chr3L 7187383 7187421 chr3L 7187485 7187517 8 96 0.0 0.0 0.0 8.0 134 chr3L 7187383 intron Dscam2 - chr3L 7187450 intron Dscam2 - chr3L 7187517 intron Dscam2 - chr3L_8_7185001 chr3L_7185001 RAL-802_95b 715 chr3L 7276197 7276202 chr3L 7276297 7276301 4 102 5.0 4.0 4.5 0.7 104 chr3L 7276197 intron unc-13-4A - chr3L 7276249 intron unc-13-4A - chr3L 7276301 intron unc-13-4A - chr3L_4_7275001 chr3L_7275001 RAL-802_95b 716 chr3L 7329004 7329025 chr3L 7329111 7329127 7 104 0.0 0.5 0.2 5.8 123 chr3L 7329004 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329066 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329127 intergenic CG42307 +,mus312 +,CG8602 - chr3L_7_7325001 chr3L_7325001 RAL-802_95b 717 chr3L 7377302 7377343 chr3L 7380422 7380435 297 9 3119 3.0 1.5 2.2 2.8 3133 chr3L 7377302 intron SMSr - chr3L 7378868 intron SMSr - chr3L 7380435 intron SMSr - chr3L_9_7375001 chr3L_7375001 RAL-802_95b 718 chr3L 7498748 7498785 chr3L 7503545 7503582 F-element 12 4796 2.5 5.5 4.0 2.4 4834 chr3L 7498748 5` UTR CG8539 - chr3L 7501165 intergenic not near genes chr3L 7503582 intergenic not near genes chr3L_12_7500001 chr3L_7500001 RAL-802_95b 719 chr3L 7793697 7793733 chr3L 7800769 7800805 297 7 7071 4.5 2.0 3.2 1.7 7108 chr3L 7793697 intron CG32369 - chr3L 7797251 intron CG32369 - chr3L 7800805 intron CG32369 - chr3L_7_7795001 chr3L_7795001 RAL-802_95b 720 chr3L 7886497 7886546 chr3L 7889035 7889084 Stalker4 5 2531 1.0 2.0 1.5 2.0 2587 chr3L 7886497 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889084 intron CG32365 + chr3L_5_7885001 chr3L_7885001 RAL-802_95b 721 chr3L 7916827 7916860 chr3L 7926008 7926051 roo 8 9187 4.0 8.5 6.2 1.1 9224 chr3L 7916827 3` UTR syd - chr3L 7921439 intron syd - chr3L 7926051 3` UTR syd - chr3L_8_7920001 chr3L_7920001 RAL-802_95b 722 chr3L 7985359 7985394 chr3L 7987707 7987727 NOF 6 2345 3.0 2.0 2.5 1.7 2368 chr3L 7985359 intron nmo + chr3L 7986543 intron nmo + chr3L 7987727 intron nmo + chr3L_6_7985001 chr3L_7985001 RAL-802_95b 723 chr3L 8019680 8019732 chr3L 8024114 8024164 NOF 6 4433 2.5 0.5 1.5 2.4 4484 chr3L 8019680 intron nmo + chr3L 8021922 intron nmo + chr3L 8024164 intron nmo + chr3L_6_8020001 chr3L_8020001 RAL-802_95b 724 chr3L 8295774 8295788 chr3L 8295952 8295966 4 177 4.5 2.0 3.2 1.0 192 chr3L 8295774 intergenic CG7201 - chr3L 8295870 intergenic not near genes chr3L 8295966 intergenic not near genes chr3L_4_8295001 chr3L_8295001 RAL-802_95b 725 chr3L 8295789 8295820 chr3L 8295947 8295998 12 173 2.0 2.0 2.0 4.0 209 chr3L 8295789 intergenic CG7201 - chr3L 8295894 intergenic not near genes chr3L 8295998 intergenic not near genes chr3L_12_8295001 chr3L_8295001 RAL-802_95b 726 chr3L 8298246 8298259 chr3L 8298342 8298355 4 96 9.0 5.0 7.0 0.5 109 chr3L 8298246 3` UTR Rab19 + chr3L 8298300 3` UTR Rab19 + chr3L 8298355 3` UTR Rab19 + chr3L_4_8295001 chr3L_8295001 RAL-802_95b 727 chr3L 8298260 8298288 chr3L 8298340 8298367 5 83 5.0 5.0 5.0 0.8 107 chr3L 8298260 3` UTR Rab19 + chr3L 8298314 3` UTR Rab19 + chr3L 8298367 3` UTR Rab19 + chr3L_5_8295001 chr3L_8295001 RAL-802_95b 728 chr3L 8498304 8498321 chr3L 8505791 8505808 blood 4 7487 0.0 8.0 4.0 0.8 7504 chr3L 8498304 intron CG43163 - chr3L 8502056 intron CG43163 - chr3L 8505808 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-802_95b 729 chr3L 8515152 8515173 chr3L 8515237 8515271 7 95 2.0 3.0 2.5 2.0 119 chr3L 8515152 exon CG6765 + chr3L 8515212 intron CG6765 + chr3L 8515271 intron CG6765 + chr3L_7_8515001 chr3L_8515001 RAL-802_95b 730 chr3L 8551738 8551755 chr3L 8551841 8551858 5 103 3.5 1.5 2.5 1.4 120 chr3L 8551738 intron rhea + chr3L 8551798 intron rhea + chr3L 8551858 intron rhea + chr3L_5_8550001 chr3L_8550001 RAL-802_95b 731 chr3L 8582925 8582973 chr3L 8583026 8583073 7 101 1.0 0.5 0.8 3.9 148 chr3L 8582925 intron CG43078 + chr3L 8582999 intron CG43078 + chr3L 8583073 intron CG43078 + chr3L_7_8580001 chr3L_8580001 RAL-802_95b 732 chr3L 8643556 8643607 chr3L 8643652 8643703 13 91 3.5 4.5 4.0 2.6 147 chr3L 8643556 3` UTR Cpr66D + chr3L 8643630 intergenic Cpr66D + chr3L 8643703 intergenic Cpr66D + chr3L_13_8640001 chr3L_8640001 RAL-802_95b 733 chr3L 8690588 8690618 chr3L 8690851 8690880 5 259 7.5 3.5 5.5 0.8 292 chr3L 8690588 intergenic not near genes chr3L 8690734 intergenic not near genes chr3L 8690880 intergenic not near genes chr3L_5_8690001 chr3L_8690001 RAL-802_95b 734 chr3L 8782114 8782138 chr3L 8782255 8782263 8 142 1.0 0.5 0.8 4.4 149 chr3L 8782114 intron Fhos + chr3L 8782188 intron Fhos + chr3L 8782263 intron Fhos + chr3L_8_8780001 chr3L_8780001 RAL-802_95b 735 chr3L 8791259 8791299 chr3L 8796699 8796739 I-element 12 5439 1.5 3.0 2.2 3.8 5480 chr3L 8791259 exon Fhos + chr3L 8793999 intron Fhos + chr3L 8796739 intron Fhos + chr3L_12_8790001 chr3L_8790001 RAL-802_95b 736 chr3L 8959381 8959402 chr3L 8959559 8959572 6 179 0.5 1.0 0.8 3.3 191 chr3L 8959381 intron CG13313 + chr3L 8959476 intron CG13313 + chr3L 8959572 intron CG13313 + chr3L_6_8955001 chr3L_8955001 RAL-802_95b 737 chr3L 9003938 9003970 chr3L 9004043 9004075 6 104 2.0 5.5 3.8 1.2 137 chr3L 9003938 intergenic not near genes chr3L 9004006 intergenic not near genes chr3L 9004075 intergenic not near genes chr3L_6_9000001 chr3L_9000001 RAL-802_95b 738 chr3L 9009943 9009960 chr3L 9010067 9010084 4 124 1.0 3.5 2.2 1.2 141 chr3L 9009943 intergenic CG5194 - chr3L 9010014 intergenic CG5194 - chr3L 9010084 intergenic CG5194 - chr3L_4_9010001 chr3L_9010001 RAL-802_95b 739 chr3L 9030414 9030456 chr3L 9030513 9030549 7 97 1.0 2.0 1.5 2.8 135 chr3L 9030414 intergenic not near genes chr3L 9030482 intergenic not near genes chr3L 9030549 intergenic not near genes chr3L_7_9030001 chr3L_9030001 RAL-802_95b 740 chr3L 9076924 9076959 chr3L 9084485 9084534 412 7 7572 4.0 0.5 2.2 2.2 7610 chr3L 9076924 exon Tequila + chr3L 9080729 intron Tequila + chr3L 9084534 exon Tequila + chr3L_7_9080001 chr3L_9080001 RAL-802_95b 741 chr3L 9113546 9113555 chr3L 9113607 9113631 4 75 5.0 1.5 3.2 1.0 85 chr3L 9113546 intron bol - chr3L 9113588 intron bol - chr3L 9113631 intron bol - chr3L_4_9110001 chr3L_9110001 RAL-802_95b 742 chr3L 9164691 9164727 chr3L 9166163 9166187 hobo 7 1474 1.0 1.5 1.2 3.2 1496 chr3L 9164691 intron Rdl - chr3L 9165439 intron Rdl - chr3L 9166187 intron Rdl - chr3L_7_9165001 chr3L_9165001 RAL-802_95b 743 chr3L 9232855 9232873 chr3L 9232931 9232969 4 88 0.5 3.0 1.8 1.4 114 chr3L 9232855 intergenic not near genes chr3L 9232912 intergenic not near genes chr3L 9232969 intergenic not near genes chr3L_4_9230001 chr3L_9230001 RAL-802_95b 744 chr3L 9359573 9359621 chr3L 9359684 9359727 9 107 4.0 8.0 6.0 1.3 154 chr3L 9359573 3` UTR CG32039 + chr3L 9359650 3` UTR CG32039 + chr3L 9359727 3` UTR CG32039 + chr3L_9_9355001 chr3L_9355001 RAL-802_95b 745 chr3L 9390843 9390863 chr3L 9390993 9390998 5 147 2.5 3.5 3.0 1.2 155 chr3L 9390843 intron CG4080 - chr3L 9390920 intron CG4080 - chr3L 9390998 intron CG4080 - chr3L_5_9390001 chr3L_9390001 RAL-802_95b 746 chr3L 9498184 9498230 chr3L 9498281 9498327 11 96 2.5 1.0 1.8 3.9 143 chr3L 9498184 intron path - chr3L 9498256 intron path - chr3L 9498327 intron path - chr3L_11_9495001 chr3L_9495001 RAL-802_95b 747 chr3L 9501686 9501729 chr3L 9502192 9502235 roo 9 505 0.5 6.0 3.2 2.1 549 chr3L 9501686 intron path - chr3L 9501960 intron path - chr3L 9502235 intron path - chr3L_9_9500001 chr3L_9500001 RAL-802_95b 748 chr3L 9571886 9571916 chr3L 9572254 9572264 jockey 7 362 6.0 4.0 5.0 1.2 378 chr3L 9571886 intron CG42673 + chr3L 9572075 intron CG42673 + chr3L 9572264 intron CG42673 + chr3L_7_9570001 chr3L_9570001 RAL-802_95b 749 chr3L 9575903 9575936 chr3L 9581001 9581035 jockey 5 5094 1.5 1.0 1.2 2.3 5132 chr3L 9575903 intron CG42673 + chr3L 9578469 intron CG42673 + chr3L 9581035 intron CG42673 + chr3L_5_9575001 chr3L_9575001 RAL-802_95b 750 chr3L 9629718 9629767 chr3L 9629814 9629863 9 95 3.5 8.0 5.8 1.3 145 chr3L 9629718 intron CG8336 + chr3L 9629790 intron CG8336 + chr3L 9629863 intron CG8336 + chr3L_9_9625001 chr3L_9625001 RAL-802_95b 751 chr3L 9639034 9639055 chr3L 9639123 9639160 5 100 0.0 2.0 1.0 2.5 126 chr3L 9639034 intron fry - chr3L 9639097 intron fry - chr3L 9639160 intron fry - chr3L_5_9635001 chr3L_9635001 RAL-802_95b 752 chr3L 9733353 9733389 chr3L 9733452 9733488 9 97 1.0 2.0 1.5 3.6 135 chr3L 9733353 intron CG6749 - chr3L 9733420 intron CG6749 - chr3L 9733488 intron CG6749 - chr3L_9_9730001 chr3L_9730001 RAL-802_95b 753 chr3L 9829032 9829063 chr3L 9829134 9829165 7 102 1.0 1.5 1.2 3.2 133 chr3L 9829032 intron CG43897 + chr3L 9829098 intron CG43897 + chr3L 9829165 intron CG43897 + chr3L_7_9825001 chr3L_9825001 RAL-802_95b 754 chr3L 9929679 9929701 chr3L 9938459 9938496 roo 6 8792 1.5 3.5 2.5 1.7 8817 chr3L 9929679 intron CG34356 + chr3L 9934088 intron CG34356 + chr3L 9938496 intron CG34356 + chr3L_6_9930001 chr3L_9930001 RAL-802_95b 755 chr3L 10049523 10049555 chr3L 10049623 10049655 5 99 5.0 3.5 4.2 1.0 132 chr3L 10049523 intron dpr6 + chr3L 10049589 intron dpr6 + chr3L 10049655 intron dpr6 + chr3L_5_10045001 chr3L_10045001 RAL-802_95b 756 chr3L 10159303 10159308 chr3L 10159411 10159416 4 108 5.5 0.5 3.0 1.0 113 chr3L 10159303 intron dpr10 - chr3L 10159360 intron dpr10 - chr3L 10159416 intron dpr10 - chr3L_4_10155001 chr3L_10155001 RAL-802_95b 757 chr3L 10191295 10191317 chr3L 10191426 10191448 4 131 0.0 2.5 1.2 1.8 153 chr3L 10191295 intron ect - chr3L 10191372 intron ect - chr3L 10191448 intron ect - chr3L_4_10190001 chr3L_10190001 RAL-802_95b 758 chr3L 10308722 10308757 chr3L 10308819 10308819 5 90 1.0 0.5 0.8 2.8 97 chr3L 10308722 intergenic not near genes chr3L 10308770 intergenic not near genes chr3L 10308819 intergenic not near genes chr3L_5_10305001 chr3L_10305001 RAL-802_95b 759 chr3L 10348534 10348670 chr3L 10348625 10348807 6 119 0.0 0.0 0.0 6.0 273 chr3L 10348534 intron CR44327 + chr3L 10348670 intron CR44327 + chr3L 10348807 intron CR44327 + chr3L_6_10345001 chr3L_10345001 RAL-802_95b 760 chr3L 10614751 10614793 chr3L 10614858 10614892 7 100 0.0 3.5 1.8 2.5 141 chr3L 10614751 intergenic not near genes chr3L 10614822 intergenic not near genes chr3L 10614892 intergenic not near genes chr3L_7_10610001 chr3L_10610001 RAL-802_95b 761 chr3L 10621831 10621865 chr3L 10621936 10621953 5 101 4.5 3.0 3.8 1.0 122 chr3L 10621831 intergenic not near genes chr3L 10621892 intergenic not near genes chr3L 10621953 intergenic not near genes chr3L_5_10620001 chr3L_10620001 RAL-802_95b 762 chr3L 10627423 10627441 chr3L 10627524 10627544 4 102 0.0 1.0 0.5 2.7 121 chr3L 10627423 3` UTR CG34238 + chr3L 10627484 intergenic CG34238 +,CG14151 - chr3L 10627544 intergenic CG34238 +,CG14151 - chr3L_4_10625001 chr3L_10625001 RAL-802_95b 763 chr3L 10658056 10658200 chr3L 10658153 10658347 13 114 0.0 0.0 0.0 13.0 291 chr3L 10658056 intron CG32066 - chr3L 10658202 intron CG32066 - chr3L 10658347 intron CG32066 - chr3L_13_10655001 chr3L_10655001 RAL-802_95b 764 chr3L 10705556 10705599 chr3L 10705654 10705697 5 98 2.0 1.5 1.8 1.8 141 chr3L 10705556 intergenic not near genes chr3L 10705626 intergenic not near genes chr3L 10705697 intergenic not near genes chr3L_5_10705001 chr3L_10705001 RAL-802_95b 765 chr3L 10721983 10722013 chr3L 10722075 10722109 8 94 2.0 0.0 1.0 4.0 126 chr3L 10721983 intergenic not near genes chr3L 10722046 intergenic not near genes chr3L 10722109 intergenic not near genes chr3L_8_10720001 chr3L_10720001 RAL-802_95b 766 chr3L 10745521 10745567 chr3L 10745621 10745667 10 97 4.0 4.0 4.0 2.0 146 chr3L 10745521 intergenic not near genes chr3L 10745594 intergenic not near genes chr3L 10745667 intergenic not near genes chr3L_10_10745001 chr3L_10745001 RAL-802_95b 767 chr3L 10887361 10887377 chr3L 10887450 10887456 5 93 0.0 5.0 2.5 1.4 95 chr3L 10887361 intergenic not near genes chr3L 10887408 intergenic not near genes chr3L 10887456 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-802_95b 768 chr3L 11042105 11042117 chr3L 11042264 11042276 4 159 8.5 0.0 4.2 0.8 171 chr3L 11042105 intron CG43693 - chr3L 11042190 intron CG43693 - chr3L 11042276 intron CG43693 - chr3L_4_11040001 chr3L_11040001 RAL-802_95b 769 chr3L 11042120 11042152 chr3L 11042253 11042311 9 155 3.5 0.0 1.8 3.2 191 chr3L 11042120 intron CG43693 - chr3L 11042216 intron CG43693 - chr3L 11042311 intron CG43693 - chr3L_9_11040001 chr3L_11040001 RAL-802_95b 770 chr3L 11105284 11105307 chr3L 11107015 11107033 X-element 6 1730 4.5 0.5 2.5 1.7 1749 chr3L 11105284 intergenic not near genes chr3L 11106158 intergenic not near genes chr3L 11107033 exon CG32073 - chr3L_6_11105001 chr3L_11105001 RAL-802_95b 771 chr3L 11107635 11107681 chr3L 11107936 11107961 5 296 2.5 2.5 2.5 1.4 326 chr3L 11107635 intergenic CG32073 - chr3L 11107798 intergenic CG32073 -,CG12522 + chr3L 11107961 intergenic CG12522 +,CG32073 - chr3L_5_11105001 chr3L_11105001 RAL-802_95b 772 chr3L 11131800 11131807 chr3L 11132084 11132091 4 284 6.5 1.0 3.8 0.8 291 chr3L 11131800 intron CG42575 + chr3L 11131946 intron,3` UTR CG42575 +,CG32074 - chr3L 11132091 intron,exon CG42575 +,CG32074 - chr3L_4_11130001 chr3L_11130001 RAL-802_95b 773 chr3L 11141446 11141461 chr3L 11141560 11141576 4 115 4.0 1.0 2.5 1.1 130 chr3L 11141446 intron CG32082 + chr3L 11141511 intron CG32082 + chr3L 11141576 intron CG32082 + chr3L_4_11140001 chr3L_11140001 RAL-802_95b 774 chr3L 11264468 11264497 chr3L 11271419 11271454 17.6 6 6965 1.5 2.0 1.8 2.1 6986 chr3L 11264468 intergenic not near genes chr3L 11267961 intergenic not near genes chr3L 11271454 intergenic not near genes chr3L_6_11265001 chr3L_11265001 RAL-802_95b 775 chr3L 11290623 11290657 chr3L 11290950 11291000 12 338 3.0 1.5 2.2 3.8 377 chr3L 11290623 intron CG6175 - chr3L 11290812 intron CG6175 - chr3L 11291000 intron CG6175 - chr3L_12_11290001 chr3L_11290001 RAL-802_95b 776 chr3L 11435550 11435576 chr3L 11435734 11435760 5 184 4.5 1.5 3.0 1.2 210 chr3L 11435550 intergenic CG6149 -,CR44548 + chr3L 11435655 5` UTR CR44548 + chr3L 11435760 5` UTR CR44548 + chr3L_5_11435001 chr3L_11435001 RAL-802_95b 777 chr3L 11456887 11456915 chr3L 11457007 11457035 6 120 2.0 2.0 2.0 2.0 148 chr3L 11456887 intergenic CG12289 - chr3L 11456961 intergenic CG12289 - chr3L 11457035 intergenic CG12289 - chr3L_6_11455001 chr3L_11455001 RAL-802_95b 778 chr3L 11528211 11528253 chr3L 11528312 11528354 10 97 3.5 3.0 3.2 2.4 143 chr3L 11528211 intron Mob2 - chr3L 11528282 intron Mob2 - chr3L 11528354 intron Mob2 - chr3L_10_11525001 chr3L_11525001 RAL-802_95b 779 chr3L 11579557 11579583 chr3L 11579663 11579708 4 120 1.0 2.0 1.5 1.6 151 chr3L 11579557 intergenic CG43390 - chr3L 11579632 intergenic CG43390 - chr3L 11579708 intergenic CG43390 - chr3L_4_11575001 chr3L_11575001 RAL-802_95b 780 chr3L 11588716 11588755 chr3L 11588892 11588931 5 176 3.5 4.0 3.8 1.0 215 chr3L 11588716 intergenic not near genes chr3L 11588824 intergenic not near genes chr3L 11588931 intergenic not near genes chr3L_5_11585001 chr3L_11585001 RAL-802_95b 781 chr3L 11590250 11590272 chr3L 11590360 11590382 7 110 1.0 1.5 1.2 3.2 132 chr3L 11590250 intergenic CG7377 + chr3L 11590316 intergenic CG7377 + chr3L 11590382 intergenic CG7377 +,CG33268 - chr3L_7_11590001 chr3L_11590001 RAL-802_95b 782 chr3L 11723068 11723105 chr3L 11727883 11727915 Doc 9 4813 3.0 6.5 4.8 1.6 4847 chr3L 11723068 3` UTR Bmcp + chr3L 11725492 intron Bmcp + chr3L 11727915 3` UTR Bmcp + chr3L_9_11725001 chr3L_11725001 RAL-802_95b 783 chr3L 11743998 11744020 chr3L 11744126 11744148 5 126 4.5 4.5 4.5 0.9 150 chr3L 11743998 exon CG6024 - chr3L 11744073 intron CG6024 - chr3L 11744148 intron CG6024 - chr3L_5_11740001 chr3L_11740001 RAL-802_95b 784 chr3L 11943473 11943510 chr3L 11943594 11943631 4 117 2.5 2.5 2.5 1.1 158 chr3L 11943473 3` UTR Rpt4R + chr3L 11943552 intergenic Rpt4R +,CG5883 - chr3L 11943631 intergenic CG5883 -,Rpt4R + chr3L_4_11940001 chr3L_11940001 RAL-802_95b 785 chr3L 12013900 12013922 chr3L 12014011 12014017 4 107 3.0 1.0 2.0 1.3 117 chr3L 12013900 intron rols - chr3L 12013958 intron rols - chr3L 12014017 intron rols - chr3L_4_12010001 chr3L_12010001 RAL-802_95b 786 chr3L 12019322 12019348 chr3L 12019455 12019481 5 133 6.0 5.0 5.5 0.8 159 chr3L 12019322 intron rols - chr3L 12019402 intron rols - chr3L 12019481 intron rols - chr3L_5_12015001 chr3L_12015001 RAL-802_95b 787 chr3L 12052693 12052725 chr3L 12052802 12052808 4 100 6.0 7.0 6.5 0.5 115 chr3L 12052693 intron rols - chr3L 12052750 intron rols - chr3L 12052808 intron rols - chr3L_4_12050001 chr3L_12050001 RAL-802_95b 788 chr3L 12075405 12075460 chr3L 12075514 12075564 6 101 0.5 0.0 0.2 5.0 159 chr3L 12075405 intron Sema-5c - chr3L 12075484 intron Sema-5c - chr3L 12075564 intron Sema-5c - chr3L_6_12075001 chr3L_12075001 RAL-802_95b 789 chr3L 12083937 12083971 chr3L 12084104 12084135 5 167 18.0 5.0 11.5 0.4 198 chr3L 12083937 intergenic not near genes chr3L 12084036 intergenic not near genes chr3L 12084135 intergenic not near genes chr3L_5_12080001 chr3L_12080001 RAL-802_95b 790 chr3L 12089070 12089110 chr3L 12089163 12089200 12 97 4.0 4.0 4.0 2.4 130 chr3L 12089070 exon CG17154 + chr3L 12089135 3` UTR CG17154 + chr3L 12089200 3` UTR CG17154 + chr3L_12_12085001 chr3L_12085001 RAL-802_95b 791 chr3L 12119758 12119788 chr3L 12119875 12119905 7 113 10.0 9.5 9.8 0.6 147 chr3L 12119758 3` UTR ssp + chr3L 12119832 intergenic ssp +,CG11560 + chr3L 12119905 intergenic CG11560 +,ssp + chr3L_7_12115001 chr3L_12115001 RAL-802_95b 792 chr3L 12170777 12170821 chr3L 12170879 12170923 5 86 10.0 12.5 11.2 0.4 146 chr3L 12170777 intron Rh7 - chr3L 12170850 intron Rh7 - chr3L 12170923 intron Rh7 - chr3L_5_12170001 chr3L_12170001 RAL-802_95b 793 chr3L 12286800 12286841 chr3L 12286900 12286934 7 98 2.5 2.5 2.5 2.0 134 chr3L 12286800 intergenic not near genes chr3L 12286867 intergenic not near genes chr3L 12286934 intergenic not near genes chr3L_7_12285001 chr3L_12285001 RAL-802_95b 794 chr3L 12290228 12290255 chr3L 12290338 12290357 4 108 2.5 0.5 1.5 1.6 129 chr3L 12290228 intergenic CR45658 - chr3L 12290292 intergenic CR45658 - chr3L 12290357 intergenic CR45658 - chr3L_4_12290001 chr3L_12290001 RAL-802_95b 795 chr3L 12369517 12369563 chr3L 12369627 12369673 8 108 2.0 2.5 2.2 2.5 156 chr3L 12369517 intron Ncc69 - chr3L 12369595 intron Ncc69 - chr3L 12369673 intron Ncc69 - chr3L_8_12365001 chr3L_12365001 RAL-802_95b 796 chr3L 12412909 12412923 chr3L 12413011 12413025 6 102 3.0 2.0 2.5 1.7 116 chr3L 12412909 intron CG32103 - chr3L 12412967 intron CG32103 - chr3L 12413025 intron CG32103 - chr3L_6_12410001 chr3L_12410001 RAL-802_95b 797 chr3L 12460327 12460343 chr3L 12460404 12460440 4 92 0.0 2.0 1.0 2.0 113 chr3L 12460327 intergenic not near genes chr3L 12460384 intergenic not near genes chr3L 12460440 intergenic not near genes chr3L_4_12460001 chr3L_12460001 RAL-802_95b 798 chr3L 12467241 12467271 chr3L 12467346 12467376 8 104 4.5 4.0 4.2 1.5 135 chr3L 12467241 intron eyg - chr3L 12467308 intron eyg - chr3L 12467376 intron eyg - chr3L_8_12465001 chr3L_12465001 RAL-802_95b 799 chr3L 12504114 12504144 chr3L 12504216 12504226 7 100 0.0 0.0 0.0 7.0 112 chr3L 12504114 intergenic vih +,CG10646 - chr3L 12504170 intergenic vih +,CG10646 - chr3L 12504226 intergenic vih +,CG10646 - chr3L_7_12500001 chr3L_12500001 RAL-802_95b 800 chr3L 12626137 12626166 chr3L 12626266 12626295 6 127 1.0 1.0 1.0 3.0 158 chr3L 12626137 intergenic not near genes chr3L 12626216 intergenic not near genes chr3L 12626295 intergenic not near genes chr3L_6_12625001 chr3L_12625001 RAL-802_95b 801 chr3L 12706625 12706650 chr3L 12706772 12706772 11 143 5.0 1.0 3.0 2.8 147 chr3L 12706625 intron mirr + chr3L 12706698 intron mirr + chr3L 12706772 intron mirr + chr3L_11_12705001 chr3L_12705001 RAL-802_95b 802 chr3L 12801991 12802012 chr3L 12802087 12802108 4 96 5.0 7.5 6.2 0.6 117 chr3L 12801991 intron Atg1 - chr3L 12802050 intron Atg1 - chr3L 12802108 intron Atg1 - chr3L_4_12800001 chr3L_12800001 RAL-802_95b 803 chr3L 12874936 12874950 chr3L 12877218 12877262 jockey 4 2300 1.0 4.0 2.5 1.1 2326 chr3L 12874936 intergenic not near genes chr3L 12876099 intergenic not near genes chr3L 12877262 intergenic not near genes chr3L_4_12875001 chr3L_12875001 RAL-802_95b 804 chr3L 12957776 12957820 chr3L 12962271 12962310 copia 8 4499 2.0 2.0 2.0 2.7 4534 chr3L 12957776 intergenic not near genes chr3L 12960043 intergenic not near genes chr3L 12962310 intergenic not near genes chr3L_8_12960001 chr3L_12960001 RAL-802_95b 805 chr3L 13007698 13007931 chr3L 13007789 13008049 6 104 9.0 4.0 6.5 0.8 351 chr3L 13007698 exon CG11263 + chr3L 13007874 3` UTR CG11263 + chr3L 13008049 intergenic CG11263 +,CG14117 + chr3L_6_13005001 chr3L_13005001 RAL-802_95b 806 chr3L 13085053 13085080 chr3L 13085152 13085158 5 95 3.5 8.0 5.8 0.7 105 chr3L 13085053 intergenic not near genes chr3L 13085106 intergenic not near genes chr3L 13085158 intergenic not near genes chr3L_5_13085001 chr3L_13085001 RAL-802_95b 807 chr3L 13144132 13144150 chr3L 13144229 13144247 4 97 11.0 8.0 9.5 0.4 115 chr3L 13144132 intergenic not near genes chr3L 13144190 intergenic not near genes chr3L 13144247 intergenic not near genes chr3L_4_13140001 chr3L_13140001 RAL-802_95b 808 chr3L 13472242 13472262 chr3L 13472314 13472337 4 85 6.0 7.0 6.5 0.5 95 chr3L 13472242 intron CG10089 - chr3L 13472290 intron CG10089 - chr3L 13472337 intron CG10089 - chr3L_4_13470001 chr3L_13470001 RAL-802_95b 809 chr3L 13677508 13677562 chr3L 13677605 13677659 16 95 2.0 2.5 2.2 5.0 151 chr3L 13677508 intron bru-3 - chr3L 13677584 intron bru-3 - chr3L 13677659 intron bru-3 - chr3L_16_13675001 chr3L_13675001 RAL-802_95b 810 chr3L 13783188 13783215 chr3L 13783292 13783330 4 112 4.5 3.5 4.0 0.8 142 chr3L 13783188 intron bru-3 - chr3L 13783259 intron bru-3 - chr3L 13783330 intron bru-3 - chr3L_4_13780001 chr3L_13780001 RAL-802_95b 811 chr3L 13804524 13804574 chr3L 13822830 13822861 roo 10 18297 2.0 0.0 1.0 5.0 18337 chr3L 13804524 intergenic not near genes chr3L 13813692 intergenic not near genes chr3L 13822861 intergenic not near genes chr3L_10_13810001 chr3L_13810001 RAL-802_95b 812 chr3L 13837269 13837282 chr3L 13837366 13837379 4 97 0.0 3.0 1.5 1.6 110 chr3L 13837269 intergenic CG43184 + chr3L 13837324 intergenic CG43184 + chr3L 13837379 intergenic CG43184 + chr3L_4_13835001 chr3L_13835001 RAL-802_95b 813 chr3L 13920402 13920434 chr3L 13920499 13920534 12 100 2.5 3.0 2.8 3.2 132 chr3L 13920402 intron Rgl - chr3L 13920468 intron Rgl - chr3L 13920534 intron Rgl - chr3L_12_13920001 chr3L_13920001 RAL-802_95b 814 chr3L 14076061 14076072 chr3L 14076160 14076171 4 99 8.5 10.0 9.2 0.4 110 chr3L 14076061 3` UTR,intron Pex1 +,btl + chr3L 14076116 3` UTR,intron Pex1 +,btl + chr3L 14076171 intron btl + chr3L_4_14075001 chr3L_14075001 RAL-802_95b 815 chr3L 14194705 14194741 chr3L 14194801 14194837 9 92 3.5 3.0 3.2 2.1 132 chr3L 14194705 intron nuf + chr3L 14194771 intron nuf + chr3L 14194837 intron nuf + chr3L_9_14190001 chr3L_14190001 RAL-802_95b 816 chr3L 14239986 14240006 chr3L 14240097 14240117 6 114 0.5 3.5 2.0 2.0 131 chr3L 14239986 intergenic not near genes chr3L 14240052 intergenic not near genes chr3L 14240117 intergenic not near genes chr3L_6_14240001 chr3L_14240001 RAL-802_95b 817 chr3L 14245573 14245587 chr3L 14245672 14245679 1360 5 105 2.0 1.5 1.8 1.8 106 chr3L 14245573 3` UTR CR44561 - chr3L 14245626 3` UTR CR44561 - chr3L 14245679 3` UTR CR44561 - chr3L_5_14245001 chr3L_14245001 RAL-802_95b 818 chr3L 14332733 14332772 chr3L 14332845 14332884 6 112 3.5 1.5 2.5 1.7 151 chr3L 14332733 intron fz + chr3L 14332808 intron fz + chr3L 14332884 intron fz + chr3L_6_14330001 chr3L_14330001 RAL-802_95b 819 chr3L 14356502 14356545 chr3L 14356602 14356629 4 96 2.5 2.0 2.2 1.2 127 chr3L 14356502 intron fz + chr3L 14356566 intron fz + chr3L 14356629 intron fz + chr3L_4_14355001 chr3L_14355001 RAL-802_95b 820 chr3L 14424190 14424226 chr3L 14424315 14424351 5 122 7.0 7.0 7.0 0.6 161 chr3L 14424190 intron bbg - chr3L 14424270 intron bbg - chr3L 14424351 intron bbg - chr3L_5_14420001 chr3L_14420001 RAL-802_95b 821 chr3L 14441570 14441624 chr3L 14441739 14441793 5 169 10.0 10.0 10.0 0.5 223 chr3L 14441570 intron bbg - chr3L 14441682 intron bbg - chr3L 14441793 intron bbg - chr3L_5_14440001 chr3L_14440001 RAL-802_95b 822 chr3L 14444716 14444748 chr3L 14444911 14444913 4 188 4.0 5.0 4.5 0.7 197 chr3L 14444716 intron bbg - chr3L 14444814 intron bbg - chr3L 14444913 intron bbg - chr3L_4_14440001 chr3L_14440001 RAL-802_95b 823 chr3L 14468446 14468475 chr3L 14473659 14473696 copia 8 5222 3.5 4.5 4.0 1.6 5250 chr3L 14468446 intron bbg - chr3L 14471071 intron bbg - chr3L 14473696 intron bbg - chr3L_8_14470001 chr3L_14470001 RAL-802_95b 824 chr3L 14486000 14486049 chr3L 14486101 14486150 7 95 5.0 4.0 4.5 1.3 150 chr3L 14486000 intron bbg - chr3L 14486075 intron bbg - chr3L 14486150 intron bbg - chr3L_7_14485001 chr3L_14485001 RAL-802_95b 825 chr3L 14522094 14522119 chr3L 14522213 14522233 5 115 6.0 9.0 7.5 0.6 139 chr3L 14522094 intron bbg - chr3L 14522164 intron bbg - chr3L 14522233 intron bbg - chr3L_5_14520001 chr3L_14520001 RAL-802_95b 826 chr3L 14546598 14546812 chr3L 14546688 14546913 7 95 0.5 3.0 1.8 2.5 315 chr3L 14546598 intron CG9238 - chr3L 14546756 intron CG9238 - chr3L 14546913 intron CG9238 - chr3L_7_14545001 chr3L_14545001 RAL-802_95b 827 chr3L 14549553 14549596 chr3L 14549667 14549701 6 110 8.0 6.0 7.0 0.8 148 chr3L 14549553 intron CG9238 - chr3L 14549627 intron CG9238 - chr3L 14549701 intron CG9238 - chr3L_6_14545001 chr3L_14545001 RAL-802_95b 828 chr3L 14565727 14565778 chr3L 14565838 14565884 8 108 1.0 4.5 2.8 2.1 157 chr3L 14565727 intergenic not near genes chr3L 14565806 intergenic not near genes chr3L 14565884 intergenic not near genes chr3L_8_14565001 chr3L_14565001 RAL-802_95b 829 chr3L 14603067 14603074 chr3L 14603164 14603171 4 97 0.0 3.5 1.8 1.4 104 chr3L 14603067 intergenic not near genes chr3L 14603119 intergenic not near genes chr3L 14603171 intergenic not near genes chr3L_4_14600001 chr3L_14600001 RAL-802_95b 830 chr3L 14762184 14762234 chr3L 14766671 14766721 8 4497 26.5 26.5 26.5 0.3 4537 chr3L 14762184 5` UTR CG9384 + chr3L 14764452 exon CG9384 + chr3L 14766721 3` UTR CG9384 + chr3L_8_14760001 chr3L_14760001 RAL-802_95b 831 chr3L 14870044 14870078 chr3L 14870140 14870174 10 93 4.0 2.0 3.0 2.5 130 chr3L 14870044 intron CG17839 + chr3L 14870109 intron CG17839 + chr3L 14870174 intron CG17839 + chr3L_10_14870001 chr3L_14870001 RAL-802_95b 832 chr3L 14933425 14933461 chr3L 14933527 14933563 6 102 0.0 1.0 0.5 4.0 138 chr3L 14933425 intron DCX-EMAP + chr3L 14933494 intron DCX-EMAP + chr3L 14933563 intron DCX-EMAP + chr3L_6_14930001 chr3L_14930001 RAL-802_95b 833 chr3L 14959976 14960015 chr3L 14960080 14960119 6 104 1.5 1.5 1.5 2.4 143 chr3L 14959976 intergenic not near genes chr3L 14960048 intergenic not near genes chr3L 14960119 intergenic not near genes chr3L_6_14960001 chr3L_14960001 RAL-802_95b 834 chr3L 14970741 14970761 chr3L 14971071 14971091 F-element 8 330 9.5 5.0 7.2 1.0 350 chr3L 14970741 intergenic Tom + chr3L 14970916 intergenic not near genes chr3L 14971091 intergenic not near genes chr3L_8_14970001 chr3L_14970001 RAL-802_95b 835 chr3L 15085034 15085058 chr3L 15086220 15086244 1360 4 1185 9.0 2.0 5.5 0.6 1210 chr3L 15085034 intron cp309 - chr3L 15085639 intron cp309 - chr3L 15086244 intron cp309 - chr3L_4_15085001 chr3L_15085001 RAL-802_95b 836 chr3L 15087046 15087062 chr3L 15087147 15087168 8 108 1.0 6.5 3.8 1.7 122 chr3L 15087046 intron cp309 - chr3L 15087107 intron cp309 - chr3L 15087168 intron cp309 - chr3L_8_15085001 chr3L_15085001 RAL-802_95b 837 chr3L 15193680 15193726 chr3L 15193869 15193905 6 186 2.5 4.0 3.2 1.4 225 chr3L 15193680 intergenic not near genes chr3L 15193792 intergenic not near genes chr3L 15193905 intergenic not near genes chr3L_6_15190001 chr3L_15190001 RAL-802_95b 838 chr3L 15233555 15233575 chr3L 15233631 15233676 7 97 4.0 6.0 5.0 1.2 121 chr3L 15233555 intergenic not near genes chr3L 15233616 intergenic not near genes chr3L 15233676 intergenic not near genes chr3L_7_15230001 chr3L_15230001 RAL-802_95b 839 chr3L 15295777 15295798 chr3L 15298633 15298661 gypsy5 7 2857 5.5 9.0 7.2 0.9 2884 chr3L 15295777 intergenic not near genes chr3L 15297219 intergenic not near genes chr3L 15298661 intergenic Best4 + chr3L_7_15295001 chr3L_15295001 RAL-802_95b 840 chr3L 15348092 15348139 chr3L 15348270 15348317 6 175 1.5 3.0 2.2 1.9 225 chr3L 15348092 intergenic not near genes chr3L 15348204 intergenic not near genes chr3L 15348317 intergenic not near genes chr3L_6_15345001 chr3L_15345001 RAL-802_95b 841 chr3L 15423744 15423780 chr3L 15426608 15426641 opus 6 2863 4.0 2.5 3.2 1.4 2897 chr3L 15423744 intergenic not near genes chr3L 15425192 intergenic not near genes chr3L 15426641 intergenic not near genes chr3L_6_15425001 chr3L_15425001 RAL-802_95b 842 chr3L 15482326 15482340 chr3L 15482419 15482461 4 107 0.5 1.5 1.0 2.0 135 chr3L 15482326 intergenic not near genes chr3L 15482394 intergenic not near genes chr3L 15482461 intergenic not near genes chr3L_4_15480001 chr3L_15480001 RAL-802_95b 843 chr3L 15536611 15536651 chr3L 15536695 15536742 12 95 1.5 3.0 2.2 3.8 131 chr3L 15536611 intron CrebA + chr3L 15536676 intron CrebA + chr3L 15536742 intron CrebA + chr3L_12_15535001 chr3L_15535001 RAL-802_95b 844 chr3L 15541601 15541652 chr3L 15541712 15541762 9 107 3.0 4.0 3.5 2.0 161 chr3L 15541601 intron CrebA + chr3L 15541682 intron CrebA + chr3L 15541762 intron CrebA + chr3L_9_15540001 chr3L_15540001 RAL-802_95b 845 chr3L 15615914 15615931 chr3L 15616030 15616047 6 116 4.0 1.5 2.8 1.6 133 chr3L 15615914 intron comm3 - chr3L 15615980 intron comm3 - chr3L 15616047 intron comm3 - chr3L_6_15615001 chr3L_15615001 RAL-802_95b 846 chr3L 15633186 15633206 chr3L 15633276 15633306 4 98 3.0 1.0 2.0 1.3 120 chr3L 15633186 intron comm3 - chr3L 15633246 intron comm3 - chr3L 15633306 intron comm3 - chr3L_4_15630001 chr3L_15630001 RAL-802_95b 847 chr3L 15691395 15691446 chr3L 15691497 15691508 10 93 0.0 2.5 1.2 4.5 113 chr3L 15691395 intron CG34451 - chr3L 15691452 intron CG34451 - chr3L 15691508 intron CG34451 - chr3L_10_15690001 chr3L_15690001 RAL-802_95b 848 chr3L 15778501 15778550 chr3L 15778672 15778711 5 167 2.5 1.0 1.8 1.8 210 chr3L 15778501 intergenic not near genes chr3L 15778606 intergenic not near genes chr3L 15778711 intergenic not near genes chr3L_5_15775001 chr3L_15775001 RAL-802_95b 849 chr3L 16154081 16154120 chr3L 16154187 16154226 4 98 7.0 4.0 5.5 0.6 145 chr3L 16154081 intron CG5151 - chr3L 16154154 intron CG5151 - chr3L 16154226 intron CG5151 - chr3L_4_16150001 chr3L_16150001 RAL-802_95b 850 chr3L 16158806 16158826 chr3L 16158891 16158931 8 100 0.5 4.5 2.5 2.3 125 chr3L 16158806 intron CG5151 - chr3L 16158868 intron CG5151 - chr3L 16158931 intron CG5151 - chr3L_8_16155001 chr3L_16155001 RAL-802_95b 851 chr3L 16184095 16184127 chr3L 16188927 16188951 X-element 9 4831 1.0 1.5 1.2 4.1 4856 chr3L 16184095 intergenic not near genes chr3L 16186523 intergenic not near genes chr3L 16188951 intergenic not near genes chr3L_9_16185001 chr3L_16185001 RAL-802_95b 852 chr3L 16212817 16212832 chr3L 16212928 16212942 6 111 6.0 2.5 4.2 1.2 125 chr3L 16212817 intergenic CG13073 - chr3L 16212880 intergenic CG13073 - chr3L 16212942 intergenic CG13073 - chr3L_6_16210001 chr3L_16210001 RAL-802_95b 853 chr3L 16239918 16239946 chr3L 16240013 16240042 11 94 2.5 0.5 1.5 4.4 124 chr3L 16239918 intergenic l(3)72Dr + chr3L 16239980 intergenic not near genes chr3L 16240042 intergenic not near genes chr3L_11_16235001 chr3L_16235001 RAL-802_95b 854 chr3L 16322827 16322843 chr3L 16322925 16322953 5 105 7.5 7.5 7.5 0.6 126 chr3L 16322827 intergenic not near genes chr3L 16322890 intergenic not near genes chr3L 16322953 intergenic not near genes chr3L_5_16320001 chr3L_16320001 RAL-802_95b 855 chr3L 16431811 16431856 chr3L 16431925 16431954 11 109 2.0 0.0 1.0 5.5 143 chr3L 16431811 intron,intron CG33158 +,dsx-c73A - chr3L 16431882 intron,intron CG33158 +,dsx-c73A - chr3L 16431954 intron,intron CG33158 +,dsx-c73A - chr3L_11_16430001 chr3L_16430001 RAL-802_95b 856 chr3L 16443844 16443876 chr3L 16446188 16446221 Doc 8 2355 0.0 2.0 1.0 4.0 2377 chr3L 16443844 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446221 intron,intron CG33158 +,dsx-c73A - chr3L_8_16445001 chr3L_16445001 RAL-802_95b 857 chr3L 16457891 16457907 chr3L 16457984 16457988 5 89 3.0 2.0 2.5 1.4 97 chr3L 16457891 intron CG33158 + chr3L 16457940 intron CG33158 + chr3L 16457988 intron CG33158 + chr3L_5_16455001 chr3L_16455001 RAL-802_95b 858 chr3L 16539925 16540080 chr3L 16540056 16540178 6 106 4.5 4.0 4.2 1.2 253 chr3L 16539925 intron CG43373 - chr3L 16540052 intron CG43373 - chr3L 16540178 intron CG43373 - chr3L_6_16540001 chr3L_16540001 RAL-802_95b 859 chr3L 16542919 16542965 chr3L 16543033 16543069 5 102 8.0 9.0 8.5 0.5 150 chr3L 16542919 intron CG43373 - chr3L 16542994 intron CG43373 - chr3L 16543069 intron CG43373 - chr3L_5_16540001 chr3L_16540001 RAL-802_95b 860 chr3L 16563211 16563234 chr3L 16563312 16563320 4 97 5.0 3.0 4.0 0.8 109 chr3L 16563211 intergenic Mipp1 - chr3L 16563266 intergenic Mipp1 - chr3L 16563320 intergenic Mipp1 - chr3L_4_16560001 chr3L_16560001 RAL-802_95b 861 chr3L 16610664 16610701 chr3L 16610769 16610806 5 105 4.0 3.5 3.8 1.0 142 chr3L 16610664 3` UTR Su(P) - chr3L 16610735 3` UTR Su(P) - chr3L 16610806 exon Su(P) - chr3L_5_16610001 chr3L_16610001 RAL-802_95b 862 chr3L 16638756 16638786 chr3L 16638856 16638886 7 100 5.5 7.0 6.2 1.0 130 chr3L 16638756 intron Abl - chr3L 16638821 intron Abl - chr3L 16638886 intron Abl - chr3L_7_16635001 chr3L_16635001 RAL-802_95b 863 chr3L 16652664 16652700 chr3L 16652763 16652796 5 88 6.0 3.0 4.5 0.9 132 chr3L 16652664 intron Baldspot - chr3L 16652730 intron Baldspot - chr3L 16652796 intron Baldspot - chr3L_5_16650001 chr3L_16650001 RAL-802_95b 864 chr3L 16684001 16684049 chr3L 16689242 16689280 copia 13 5235 4.0 3.5 3.8 2.7 5279 chr3L 16684001 intron,intron Lasp -,CG43954 - chr3L 16686640 intron,intron Lasp -,CG43954 - chr3L 16689280 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_13_16685001 chr3L_16685001 RAL-802_95b 865 chr3L 16714831 16714868 chr3L 16714935 16714972 8 104 6.5 5.5 6.0 1.1 141 chr3L 16714831 intron Dab + chr3L 16714902 intron Dab + chr3L 16714972 intron Dab + chr3L_8_16710001 chr3L_16710001 RAL-802_95b 866 chr3L 16743931 16743978 chr3L 16744065 16744107 5 133 1.0 1.5 1.2 2.3 176 chr3L 16743931 intergenic not near genes chr3L 16744019 intergenic not near genes chr3L 16744107 intergenic not near genes chr3L_5_16740001 chr3L_16740001 RAL-802_95b 867 chr3L 16749192 16749239 chr3L 16749288 16749330 6 91 3.0 2.5 2.8 1.6 138 chr3L 16749192 intergenic not near genes chr3L 16749261 intergenic not near genes chr3L 16749330 intergenic not near genes chr3L_6_16745001 chr3L_16745001 RAL-802_95b 868 chr3L 16808023 16808049 chr3L 16808119 16808145 5 96 11.0 5.5 8.2 0.5 122 chr3L 16808023 intron nudC + chr3L 16808084 intron nudC + chr3L 16808145 intron nudC + chr3L_5_16805001 chr3L_16805001 RAL-802_95b 869 chr3L 16845017 16845033 chr3L 16845148 16845166 5 132 1.5 6.0 3.8 1.0 149 chr3L 16845017 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845092 intergenic CG9669 -,CG9715 + chr3L 16845166 intergenic CG9669 -,CG9715 + chr3L_5_16845001 chr3L_16845001 RAL-802_95b 870 chr3L 16866201 16866322 chr3L 16866312 16866452 7 110 1.5 1.0 1.2 3.2 251 chr3L 16866201 intron Lmpt + chr3L 16866326 intron Lmpt + chr3L 16866452 intron Lmpt + chr3L_7_16865001 chr3L_16865001 RAL-802_95b 871 chr3L 16869556 16869602 chr3L 16869659 16869690 8 99 8.0 9.5 8.8 0.8 134 chr3L 16869556 intron Lmpt + chr3L 16869623 intron Lmpt + chr3L 16869690 intron Lmpt + chr3L_8_16865001 chr3L_16865001 RAL-802_95b 872 chr3L 16870846 16870895 chr3L 16870958 16871006 7 108 2.0 2.5 2.2 2.2 160 chr3L 16870846 intron Lmpt + chr3L 16870926 intron Lmpt + chr3L 16871006 intron Lmpt + chr3L_7_16870001 chr3L_16870001 RAL-802_95b 873 chr3L 16873325 16873349 chr3L 16873450 16873474 5 125 10.5 5.0 7.8 0.6 149 chr3L 16873325 intron Lmpt + chr3L 16873400 intron Lmpt + chr3L 16873474 intron Lmpt + chr3L_5_16870001 chr3L_16870001 RAL-802_95b 874 chr3L 16945738 16945758 chr3L 16954890 16954916 roo 4 9151 2.0 1.5 1.8 1.4 9178 chr3L 16945738 exon Obp73a + chr3L 16950327 intergenic not near genes chr3L 16954916 5` UTR Nc73EF + chr3L_4_16950001 chr3L_16950001 RAL-802_95b 875 chr3L 17027154 17027175 chr3L 17027262 17027274 5 109 0.0 4.0 2.0 1.7 120 chr3L 17027154 intergenic Fit2 +,CG7730 + chr3L 17027214 intergenic Fit2 +,CG7730 + chr3L 17027274 intergenic Fit2 +,CG7730 + chr3L_5_17025001 chr3L_17025001 RAL-802_95b 876 chr3L 17034927 17034961 chr3L 17035135 17035169 G2 7 207 3.5 5.5 4.5 1.3 242 chr3L 17034927 intergenic not near genes chr3L 17035048 intergenic not near genes chr3L 17035169 intergenic beg + chr3L_7_17035001 chr3L_17035001 RAL-802_95b 877 chr3L 17084987 17085032 chr3L 17094156 17094201 roo 12 9165 3.0 4.0 3.5 2.7 9214 chr3L 17084987 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094201 intron Rbp6 - chr3L_12_17085001 chr3L_17085001 RAL-802_95b 878 chr3L 17331046 17331085 chr3L 17331156 17331195 4 110 10.5 10.0 10.2 0.4 149 chr3L 17331046 intergenic not near genes chr3L 17331120 intergenic not near genes chr3L 17331195 intergenic not near genes chr3L_4_17330001 chr3L_17330001 RAL-802_95b 879 chr3L 17510725 17510751 chr3L 17510829 17510855 4 104 0.5 1.5 1.0 2.0 130 chr3L 17510725 exon Oatp74D + chr3L 17510790 intron Oatp74D + chr3L 17510855 intron Oatp74D + chr3L_4_17510001 chr3L_17510001 RAL-802_95b 880 chr3L 17580570 17580605 chr3L 17580766 17580780 6 188 3.5 2.5 3.0 1.5 210 chr3L 17580570 intron Eip74EF - chr3L 17580675 intron Eip74EF - chr3L 17580780 intron Eip74EF - chr3L_6_17580001 chr3L_17580001 RAL-802_95b 881 chr3L 17586947 17586976 chr3L 17587101 17587130 6 151 11.5 7.0 9.2 0.6 183 chr3L 17586947 intron Eip74EF - chr3L 17587038 intron Eip74EF - chr3L 17587130 intron Eip74EF - chr3L_6_17585001 chr3L_17585001 RAL-802_95b 882 chr3L 17632715 17632752 chr3L 17632848 17632885 7 133 3.0 3.0 3.0 1.8 170 chr3L 17632715 intergenic CR44567 -,CR44566 + chr3L 17632800 intergenic CR44567 - chr3L 17632885 intergenic CR44567 - chr3L_7_17630001 chr3L_17630001 RAL-802_95b 883 chr3L 17730836 17730846 chr3L 17738186 17738196 mdg1 4 7350 8.0 4.5 6.2 0.6 7360 chr3L 17730836 intron Ccn + chr3L 17734516 intron Ccn + chr3L 17738196 intron Ccn + chr3L_4_17730001 chr3L_17730001 RAL-802_95b 884 chr3L 17730848 17730879 chr3L 17738183 17738229 mdg1 6 7343 6.0 4.0 5.0 1.0 7381 chr3L 17730848 intron Ccn + chr3L 17734538 intron Ccn + chr3L 17738229 intron Ccn + chr3L_6_17730001 chr3L_17730001 RAL-802_95b 885 chr3L 17789830 17789832 chr3L 17789926 17789928 5 96 5.5 4.0 4.8 0.9 98 chr3L 17789830 intergenic not near genes chr3L 17789879 intergenic not near genes chr3L 17789928 intergenic not near genes chr3L_5_17785001 chr3L_17785001 RAL-802_95b 886 chr3L 17789834 17789871 chr3L 17789920 17789967 8 90 2.0 4.0 3.0 2.0 133 chr3L 17789834 intergenic not near genes chr3L 17789900 intergenic not near genes chr3L 17789967 intergenic not near genes chr3L_8_17785001 chr3L_17785001 RAL-802_95b 887 chr3L 17799790 17799842 chr3L 17801597 17801649 S-element 12 1804 3.0 2.0 2.5 3.4 1859 chr3L 17799790 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801649 intron NUCB1 - chr3L_12_17800001 chr3L_17800001 RAL-802_95b 888 chr3L 17834326 17834353 chr3L 17834500 17834537 6 175 0.0 1.5 0.8 3.3 211 chr3L 17834326 intron Grd + chr3L 17834432 intron Grd + chr3L 17834537 intron Grd + chr3L_6_17830001 chr3L_17830001 RAL-802_95b 889 chr3L 17884691 17884710 chr3L 17884811 17884830 4 120 5.0 6.5 5.8 0.6 139 chr3L 17884691 intergenic CG5506 - chr3L 17884760 intergenic CG5506 - chr3L 17884830 intergenic CG5506 - chr3L_4_17880001 chr3L_17880001 RAL-802_95b 890 chr3L 17887865 17887878 chr3L 17887970 17887983 4 104 9.0 12.0 10.5 0.3 118 chr3L 17887865 intron CG7402 + chr3L 17887924 intron CG7402 + chr3L 17887983 intron CG7402 + chr3L_4_17885001 chr3L_17885001 RAL-802_95b 891 chr3L 17918354 17918398 chr3L 17921174 17921221 opus 5 2822 0.0 2.5 1.2 2.3 2867 chr3L 17918354 intergenic not near genes chr3L 17919788 intergenic not near genes chr3L 17921221 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-802_95b 892 chr3L 17968151 17968168 chr3L 17968229 17968269 7 90 3.5 3.0 3.2 1.7 118 chr3L 17968151 intron Eip75B - chr3L 17968210 intron Eip75B - chr3L 17968269 intron Eip75B - chr3L_7_17965001 chr3L_17965001 RAL-802_95b 893 chr3L 18047686 18047734 chr3L 18056763 18056805 roo 10 9075 2.0 2.0 2.0 3.3 9119 chr3L 18047686 intron Eip75B - chr3L 18052246 intron Eip75B - chr3L 18056805 intron Eip75B - chr3L_10_18050001 chr3L_18050001 RAL-802_95b 894 chr3L 18073968 18074007 chr3L 18074089 18074128 8 118 13.5 14.5 14.0 0.5 160 chr3L 18073968 intergenic CG44004 - chr3L 18074048 intergenic CG44004 - chr3L 18074128 intergenic CG44004 - chr3L_8_18070001 chr3L_18070001 RAL-802_95b 895 chr3L 18075230 18075251 chr3L 18075515 18075536 11 285 8.0 5.0 6.5 1.5 306 chr3L 18075230 intergenic not near genes chr3L 18075383 intergenic not near genes chr3L 18075536 intergenic not near genes chr3L_11_18075001 chr3L_18075001 RAL-802_95b 896 chr3L 18092769 18092776 chr3L 18092904 18092909 5 135 5.5 1.5 3.5 1.1 140 chr3L 18092769 intron CG13698 - chr3L 18092839 intron CG13698 - chr3L 18092909 intron CG13698 - chr3L_5_18090001 chr3L_18090001 RAL-802_95b 897 chr3L 18122620 18122654 chr3L 18122717 18122741 4 92 10.5 10.5 10.5 0.3 121 chr3L 18122620 intergenic not near genes chr3L 18122680 intergenic not near genes chr3L 18122741 intergenic not near genes chr3L_4_18120001 chr3L_18120001 RAL-802_95b 898 chr3L 18129163 18129187 chr3L 18129258 18129292 4 100 2.0 2.0 2.0 1.3 129 chr3L 18129163 3` UTR Cyp312a1 - chr3L 18129228 3` UTR Cyp312a1 - chr3L 18129292 3` UTR Cyp312a1 - chr3L_4_18125001 chr3L_18125001 RAL-802_95b 899 chr3L 18171845 18171869 chr3L 18171956 18171970 5 108 4.5 4.5 4.5 0.9 125 chr3L 18171845 intron W - chr3L 18171908 intron W - chr3L 18171970 intron W - chr3L_5_18170001 chr3L_18170001 RAL-802_95b 900 chr3L 18175818 18175837 chr3L 18176077 18176096 4 259 3.5 6.0 4.8 0.7 278 chr3L 18175818 intron W - chr3L 18175957 intron W - chr3L 18176096 intron W - chr3L_4_18175001 chr3L_18175001 RAL-802_95b 901 chr3L 18180933 18180983 chr3L 18181036 18181090 5 101 3.0 2.5 2.8 1.3 157 chr3L 18180933 intron W - chr3L 18181012 intron W - chr3L 18181090 intron W - chr3L_5_18180001 chr3L_18180001 RAL-802_95b 902 chr3L 18210726 18210744 chr3L 18210819 18210836 6 93 1.0 4.0 2.5 1.7 110 chr3L 18210726 intergenic not near genes chr3L 18210781 intergenic not near genes chr3L 18210836 intergenic not near genes chr3L_6_18210001 chr3L_18210001 RAL-802_95b 903 chr3L 18223152 18223186 chr3L 18223255 18223263 5 98 3.5 0.0 1.8 1.8 111 chr3L 18223152 intergenic not near genes chr3L 18223208 intergenic not near genes chr3L 18223263 intergenic not near genes chr3L_5_18220001 chr3L_18220001 RAL-802_95b 904 chr3L 18262451 18262488 chr3L 18262554 18262586 7 100 3.5 2.0 2.8 1.8 135 chr3L 18262451 intergenic not near genes chr3L 18262518 intergenic not near genes chr3L 18262586 intergenic not near genes chr3L_7_18260001 chr3L_18260001 RAL-802_95b 905 chr3L 18296904 18296927 chr3L 18297001 18297024 5 96 4.5 4.5 4.5 0.9 120 chr3L 18296904 intergenic not near genes chr3L 18296964 intergenic not near genes chr3L 18297024 intergenic not near genes chr3L_5_18295001 chr3L_18295001 RAL-802_95b 906 chr3L 18301336 18301372 chr3L 18301445 18301481 4 109 1.0 2.5 1.8 1.4 145 chr3L 18301336 intergenic CG13700 - chr3L 18301408 intergenic CG13700 - chr3L 18301481 intergenic CG13700 - chr3L_4_18300001 chr3L_18300001 RAL-802_95b 907 chr3L 18408723 18408750 chr3L 18408829 18408856 5 106 4.5 5.5 5.0 0.8 133 chr3L 18408723 intergenic not near genes chr3L 18408790 intergenic not near genes chr3L 18408856 intergenic not near genes chr3L_5_18405001 chr3L_18405001 RAL-802_95b 908 chr3L 18434894 18434938 chr3L 18435065 18435109 8 171 4.0 3.5 3.8 1.7 215 chr3L 18434894 intergenic not near genes chr3L 18435002 intergenic not near genes chr3L 18435109 intergenic not near genes chr3L_8_18435001 chr3L_18435001 RAL-802_95b 909 chr3L 18436049 18436084 chr3L 18436167 18436202 11 118 2.0 2.0 2.0 3.7 153 chr3L 18436049 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436202 intergenic not near genes chr3L_11_18435001 chr3L_18435001 RAL-802_95b 910 chr3L 18506131 18506161 chr3L 18509594 18509624 F-element 5 3471 5.0 4.5 4.8 0.9 3493 chr3L 18506131 intergenic not near genes chr3L 18507878 intergenic not near genes chr3L 18509624 intergenic not near genes chr3L_5_18505001 chr3L_18505001 RAL-802_95b 911 chr3L 18528626 18528654 chr3L 18537797 18537835 roo 7 9178 5.0 7.0 6.0 1.0 9209 chr3L 18528626 intergenic not near genes chr3L 18533230 intergenic not near genes chr3L 18537835 intergenic not near genes chr3L_7_18530001 chr3L_18530001 RAL-802_95b 912 chr3L 18593932 18593977 chr3L 18595932 18595960 Doc 7 1995 3.0 1.0 2.0 2.3 2028 chr3L 18593932 intergenic term - chr3L 18594946 intergenic not near genes chr3L 18595960 intergenic CR45389 + chr3L_7_18590001 chr3L_18590001 RAL-802_95b 913 chr3L 18677877 18677917 chr3L 18677992 18678032 8 111 5.5 4.5 5.0 1.3 155 chr3L 18677877 intergenic GNBP1 + chr3L 18677954 intergenic GNBP1 + chr3L 18678032 intergenic GNBP1 + chr3L_8_18675001 chr3L_18675001 RAL-802_95b 914 chr3L 18710755 18710790 chr3L 18718712 18718762 Stalker2 10 7962 4.0 5.0 4.5 1.8 8007 chr3L 18710755 intergenic not near genes chr3L 18714758 intergenic not near genes chr3L 18718762 intergenic not near genes chr3L_10_18710001 chr3L_18710001 RAL-802_95b 915 chr3L 18721783 18721804 chr3L 18721894 18721915 4 111 1.0 6.0 3.5 0.9 132 chr3L 18721783 intergenic CG12477 - chr3L 18721849 intergenic CG12477 - chr3L 18721915 3` UTR CG12477 - chr3L_4_18720001 chr3L_18720001 RAL-802_95b 916 chr3L 18753528 18753560 chr3L 18753630 18753662 11 100 0.5 2.5 1.5 4.4 134 chr3L 18753528 intron ftz-f1 - chr3L 18753595 intron ftz-f1 - chr3L 18753662 intron ftz-f1 - chr3L_11_18750001 chr3L_18750001 RAL-802_95b 917 chr3L 18772393 18772405 chr3L 18781094 18781106 roo 4 8701 5.0 1.5 3.2 1.0 8713 chr3L 18772393 intron ftz-f1 - chr3L 18776750 intron ftz-f1 - chr3L 18781106 intron ftz-f1 - chr3L_4_18775001 chr3L_18775001 RAL-802_95b 918 chr3L 18772408 18772442 chr3L 18781089 18781122 roo 7 8690 2.0 1.5 1.8 2.5 8714 chr3L 18772408 intron ftz-f1 - chr3L 18776765 intron ftz-f1 - chr3L 18781122 intron ftz-f1 - chr3L_7_18775001 chr3L_18775001 RAL-802_95b 919 chr3L 18784373 18784400 chr3L 18784482 18784509 8 106 3.5 5.5 4.5 1.5 136 chr3L 18784373 intron ftz-f1 - chr3L 18784441 intron ftz-f1 - chr3L 18784509 intron ftz-f1 - chr3L_8_18780001 chr3L_18780001 RAL-802_95b 920 chr3L 18809791 18809829 chr3L 18809881 18809925 8 93 3.5 2.5 3.0 2.0 134 chr3L 18809791 intron CG14073 - chr3L 18809858 intron CG14073 - chr3L 18809925 intron CG14073 - chr3L_8_18805001 chr3L_18805001 RAL-802_95b 921 chr3L 18810127 18810176 chr3L 18810224 18810278 9 99 6.5 6.0 6.2 1.2 151 chr3L 18810127 intron CG14073 - chr3L 18810202 intron CG14073 - chr3L 18810278 intron CG14073 - chr3L_9_18810001 chr3L_18810001 RAL-802_95b 922 chr3L 18815242 18815282 chr3L 18815410 18815450 9 167 9.5 5.5 7.5 1.1 208 chr3L 18815242 intron CG14073 - chr3L 18815346 intron CG14073 - chr3L 18815450 intron CG14073 - chr3L_9_18815001 chr3L_18815001 RAL-802_95b 923 chr3L 18843860 18843880 chr3L 18843966 18843972 12 113 4.0 2.5 3.2 2.9 112 chr3L 18843860 intron Indy - chr3L 18843916 intron Indy - chr3L 18843972 intron Indy - chr3L_12_18840001 chr3L_18840001 RAL-802_95b 924 chr3L 18924460 18924482 chr3L 18924556 18924568 4 90 5.0 3.0 4.0 0.8 108 chr3L 18924460 intron CG32204 - chr3L 18924514 intron CG32204 - chr3L 18924568 intron CG32204 - chr3L_4_18920001 chr3L_18920001 RAL-802_95b 925 chr3L 18929947 18929988 chr3L 18930044 18930092 5 98 1.5 2.0 1.8 1.8 145 chr3L 18929947 intron CG32204 - chr3L 18930020 intron CG32204 - chr3L 18930092 exon CG32204 - chr3L_5_18930001 chr3L_18930001 RAL-802_95b 926 chr3L 18933093 18933118 chr3L 18933197 18933223 8 104 6.0 7.5 6.8 1.0 130 chr3L 18933093 intron CG32204 - chr3L 18933158 intron CG32204 - chr3L 18933223 intron CG32204 - chr3L_8_18930001 chr3L_18930001 RAL-802_95b 927 chr3L 18933616 18933658 chr3L 18933725 18933771 4 112 11.0 10.5 10.8 0.3 155 chr3L 18933616 intron CG32204 - chr3L 18933694 intron CG32204 - chr3L 18933771 intron CG32204 - chr3L_4_18930001 chr3L_18930001 RAL-802_95b 928 chr3L 19008861 19008872 chr3L 19009179 19009195 jockey 4 329 3.5 1.0 2.2 1.2 334 chr3L 19008861 intron nkd - chr3L 19009028 intron nkd - chr3L 19009195 intron nkd - chr3L_4_19005001 chr3L_19005001 RAL-802_95b 929 chr3L 19082018 19082067 chr3L 19082138 19082143 4 105 4.0 5.0 4.5 0.7 125 chr3L 19082018 intron Mkp3 - chr3L 19082080 intron Mkp3 - chr3L 19082143 intron Mkp3 - chr3L_4_19080001 chr3L_19080001 RAL-802_95b 930 chr3L 19138132 19138149 chr3L 19138234 19138263 4 105 2.5 5.0 3.8 0.8 131 chr3L 19138132 intron CG14082 - chr3L 19138198 intron CG14082 - chr3L 19138263 intron CG14082 - chr3L_4_19135001 chr3L_19135001 RAL-802_95b 931 chr3L 19182378 19182419 chr3L 19182469 19182506 8 95 2.5 1.0 1.8 2.9 128 chr3L 19182378 intron fz2 - chr3L 19182442 intron fz2 - chr3L 19182506 intron fz2 - chr3L_8_19180001 chr3L_19180001 RAL-802_95b 932 chr3L 19208039 19208087 chr3L 19209433 19209444 Doc 9 1383 1.0 1.0 1.0 4.5 1405 chr3L 19208039 intron fz2 - chr3L 19208742 intron fz2 - chr3L 19209444 intron fz2 - chr3L_9_19205001 chr3L_19205001 RAL-802_95b 933 chr3L 19222373 19222397 chr3L 19222509 19222538 5 137 1.5 1.5 1.5 2.0 165 chr3L 19222373 intron fz2 - chr3L 19222456 intron fz2 - chr3L 19222538 intron fz2 - chr3L_5_19220001 chr3L_19220001 RAL-802_95b 934 chr3L 19238716 19238750 chr3L 19238843 19238877 10 125 0.5 2.5 1.5 4.0 161 chr3L 19238716 intergenic not near genes chr3L 19238796 intergenic not near genes chr3L 19238877 intergenic not near genes chr3L_10_19235001 chr3L_19235001 RAL-802_95b 935 chr3L 19251036 19251086 chr3L 19251155 19251205 10 118 6.0 3.5 4.8 1.7 169 chr3L 19251036 intergenic not near genes chr3L 19251120 intergenic not near genes chr3L 19251205 intergenic not near genes chr3L_10_19250001 chr3L_19250001 RAL-802_95b 936 chr3L 19262197 19262225 chr3L 19262299 19262314 5 98 10.0 7.5 8.8 0.5 117 chr3L 19262197 3` UTR Bet1 + chr3L 19262256 3` UTR,3` UTR Bet1 +,Max - chr3L 19262314 3` UTR,3` UTR Bet1 +,Max - chr3L_5_19260001 chr3L_19260001 RAL-802_95b 937 chr3L 19316243 19316284 chr3L 19316349 19316389 5 98 3.0 1.5 2.2 1.6 146 chr3L 19316243 intron pip - chr3L 19316316 intron pip - chr3L 19316389 intron pip - chr3L_5_19315001 chr3L_19315001 RAL-802_95b 938 chr3L 19544216 19544268 chr3L 19544312 19544345 12 94 1.5 2.5 2.0 4.0 129 chr3L 19544216 intergenic CG9279 -,l(3)76BDr - chr3L 19544280 intergenic l(3)76BDr -,CG9279 - chr3L 19544345 3` UTR l(3)76BDr - chr3L_12_19540001 chr3L_19540001 RAL-802_95b 939 chr3L 19554797 19554853 chr3L 19554912 19554966 9 105 1.5 0.5 1.0 4.5 169 chr3L 19554797 intergenic CG9300 + chr3L 19554882 intergenic CG9300 + chr3L 19554966 intergenic CG9300 + chr3L_9_19550001 chr3L_19550001 RAL-802_95b 940 chr3L 19861809 19861841 chr3L 19863610 19863629 S-element 5 1797 1.0 2.5 1.8 1.8 1820 chr3L 19861809 5` UTR CR45433 + chr3L 19862719 intergenic not near genes chr3L 19863629 intergenic not near genes chr3L_5_19860001 chr3L_19860001 RAL-802_95b 941 chr3L 19981193 19981235 chr3L 19981290 19981320 7 94 2.5 4.0 3.2 1.7 127 chr3L 19981193 intergenic CG17732 + chr3L 19981256 intergenic CG17732 + chr3L 19981320 intergenic CG17732 + chr3L_7_19980001 chr3L_19980001 RAL-802_95b 942 chr3L 20042564 20042593 chr3L 20042664 20042693 5 100 6.0 3.5 4.8 0.9 129 chr3L 20042564 intergenic not near genes chr3L 20042628 intergenic not near genes chr3L 20042693 intergenic not near genes chr3L_5_20040001 chr3L_20040001 RAL-802_95b 943 chr3L 20113466 20113511 chr3L 20113571 20113626 8 108 3.5 3.5 3.5 1.8 160 chr3L 20113466 intergenic not near genes chr3L 20113546 intergenic not near genes chr3L 20113626 intergenic not near genes chr3L_8_20110001 chr3L_20110001 RAL-802_95b 944 chr3L 20113653 20113666 chr3L 20122930 20122943 roo 4 9277 13.0 5.5 9.2 0.4 9290 chr3L 20113653 intergenic not near genes chr3L 20118298 intergenic not near genes chr3L 20122943 intergenic not near genes chr3L_4_20115001 chr3L_20115001 RAL-802_95b 945 chr3L 20113668 20113679 chr3L 20122924 20122943 roo 4 9264 11.5 4.5 8.0 0.4 9275 chr3L 20113668 intergenic not near genes chr3L 20118306 intergenic not near genes chr3L 20122943 intergenic not near genes chr3L_4_20115001 chr3L_20115001 RAL-802_95b 946 chr3L 20148273 20148294 chr3L 20148383 20148399 4 109 2.5 3.0 2.8 1.1 126 chr3L 20148273 intergenic not near genes chr3L 20148336 intergenic not near genes chr3L 20148399 intergenic not near genes chr3L_4_20145001 chr3L_20145001 RAL-802_95b 947 chr3L 20187441 20187476 chr3L 20187540 20187561 14 97 27.5 24.5 26.0 0.5 120 chr3L 20187441 intron CG42674 - chr3L 20187501 intron CG42674 - chr3L 20187561 intron CG42674 - chr3L_14_20185001 chr3L_20185001 RAL-802_95b 948 chr3L 20386929 20386968 chr3L 20387041 20387090 14 120 1.5 3.5 2.5 4.0 161 chr3L 20386929 intron fbl + chr3L 20387010 intron fbl + chr3L 20387090 intron fbl + chr3L_14_20385001 chr3L_20385001 RAL-802_95b 949 chr3L 20476744 20476783 chr3L 20484353 20484401 springer 6 7609 4.0 0.5 2.2 1.9 7657 chr3L 20476744 3` UTR isoQC + chr3L 20480572 intergenic not near genes chr3L 20484401 3` UTR ZnT77C - chr3L_6_20480001 chr3L_20480001 RAL-802_95b 950 chr3L 20741876 20741883 chr3L 20741956 20741978 7 92 5.0 4.5 4.8 1.2 102 chr3L 20741876 intron CG13252 + chr3L 20741927 intron CG13252 + chr3L 20741978 intron CG13252 + chr3L_7_20740001 chr3L_20740001 RAL-802_95b 951 chr3L 13436147 13436201 chr3L 20815858 20815877 4 7379685 6.5 11.5 9.0 0.4 7379730 chr3L 13436147 intron CG10154 - chr3L 17126012 intron Rbp6 - chr3L 20815877 intron CG3618 - chr3L_4_17125001 chr3L_17125001 RAL-802_95b 952 chr3L 20821280 20821309 chr3L 20824769 20824778 NOF 9 3485 3.0 5.0 4.0 1.8 3498 chr3L 20821280 intron Pka-R1 + chr3L 20823029 intron Pka-R1 + chr3L 20824778 intron Pka-R1 + chr3L_9_20820001 chr3L_20820001 RAL-802_95b 953 chr3L 20849252 20849291 chr3L 20849351 20849390 5 99 2.5 3.0 2.8 1.3 138 chr3L 20849252 intron CG32432 - chr3L 20849321 intron CG32432 - chr3L 20849390 intron CG32432 - chr3L_5_20845001 chr3L_20845001 RAL-802_95b 954 chr3L 20858051 20858102 chr3L 20858170 20858221 6 119 4.0 3.5 3.8 1.2 170 chr3L 20858051 intron CG32432 - chr3L 20858136 intron CG32432 - chr3L 20858221 intron CG32432 - chr3L_6_20855001 chr3L_20855001 RAL-802_95b 955 chr3L 21010368 21010388 chr3L 21010484 21010496 5 115 8.0 10.0 9.0 0.5 128 chr3L 21010368 intron skd - chr3L 21010432 intron skd - chr3L 21010496 intron skd - chr3L_5_21010001 chr3L_21010001 RAL-802_95b 956 chr3L 21039665 21039709 chr3L 21039776 21039809 7 105 5.0 5.5 5.2 1.1 144 chr3L 21039665 intron siz + chr3L 21039737 intron siz + chr3L 21039809 intron siz + chr3L_7_21035001 chr3L_21035001 RAL-802_95b 957 chr3L 21082191 21082231 chr3L 21082289 21082319 11 95 4.5 1.5 3.0 2.8 128 chr3L 21082191 intron ko - chr3L 21082255 intron ko - chr3L 21082319 intron ko - chr3L_11_21080001 chr3L_21080001 RAL-802_95b 958 chr3L 21151858 21151897 chr3L 21156952 21157001 flea 7 5103 1.0 4.0 2.5 2.0 5143 chr3L 21151858 intron Ac78C - chr3L 21154430 intron Ac78C - chr3L 21157001 intron Ac78C - chr3L_7_21150001 chr3L_21150001 RAL-802_95b 959 chr3L 21306128 21306176 chr3L 21315307 21315334 roo 9 9175 4.0 4.0 4.0 1.8 9206 chr3L 21306128 3` UTR CG7632 + chr3L 21310731 intron Pc - chr3L 21315334 3` UTR Pc - chr3L_9_21310001 chr3L_21310001 RAL-802_95b 960 chr3L 21319516 21319547 chr3L 21319619 21319657 7 107 1.5 4.0 2.8 1.8 141 chr3L 21319516 5` UTR Rab26 + chr3L 21319586 5` UTR Rab26 + chr3L 21319657 5` UTR Rab26 + chr3L_7_21315001 chr3L_21315001 RAL-802_95b 961 chr3L 21656987 21657023 chr3L 21657094 21657104 5 105 3.0 3.5 3.2 1.2 117 chr3L 21656987 intron CG43980 + chr3L 21657046 intron CG43980 + chr3L 21657104 intron CG43980 + chr3L_5_21655001 chr3L_21655001 RAL-802_95b 962 chr3L 21799926 21799954 chr3L 21800021 21800053 7 101 3.5 3.5 3.5 1.6 127 chr3L 21799926 intergenic not near genes chr3L 21799990 intergenic not near genes chr3L 21800053 intergenic not near genes chr3L_7_21795001 chr3L_21795001 RAL-802_95b 963 chr3L 21905316 21905352 chr3L 21905415 21905450 4 89 3.0 1.0 2.0 1.3 134 chr3L 21905316 intron mub + chr3L 21905383 intron mub + chr3L 21905450 intron mub + chr3L_4_21905001 chr3L_21905001 RAL-802_95b 964 chr3L 21991098 21991138 chr3L 21991221 21991261 9 117 5.5 3.0 4.2 1.7 163 chr3L 21991098 intergenic not near genes chr3L 21991180 intergenic not near genes chr3L 21991261 intergenic not near genes chr3L_9_21990001 chr3L_21990001 RAL-802_95b 965 chr3L 22012333 22012379 chr3L 22012508 22012549 11 169 5.0 5.0 5.0 1.8 216 chr3L 22012333 intergenic not near genes chr3L 22012441 intergenic not near genes chr3L 22012549 intergenic not near genes chr3L_11_22010001 chr3L_22010001 RAL-802_95b 966 chr3L 22032171 22032202 chr3L 22032312 22032333 6 139 6.0 5.0 5.5 0.9 162 chr3L 22032171 intergenic not near genes chr3L 22032252 intergenic not near genes chr3L 22032333 intergenic not near genes chr3L_6_22030001 chr3L_22030001 RAL-802_95b 967 chr3L 22044568 22044601 chr3L 22044653 22044702 4 97 3.5 6.0 4.8 0.7 134 chr3L 22044568 intron Oct-TyrR + chr3L 22044635 intron Oct-TyrR + chr3L 22044702 intron Oct-TyrR + chr3L_4_22040001 chr3L_22040001 RAL-802_95b 968 chr3L 22099666 22099702 chr3L 22105862 22105908 3S18 10 6204 0.5 2.0 1.2 4.5 6242 chr3L 22099666 intergenic not near genes chr3L 22102787 intergenic not near genes chr3L 22105908 intergenic not near genes chr3L_10_22100001 chr3L_22100001 RAL-802_95b 969 chr3L 22130482 22130520 chr3L 22130648 22130686 10 164 3.5 2.0 2.8 2.6 204 chr3L 22130482 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130686 intergenic not near genes chr3L_10_22130001 chr3L_22130001 RAL-802_95b 970 chr3L 22137501 22137555 chr3L 22137598 22137652 5 93 6.5 6.0 6.2 0.7 151 chr3L 22137501 intron olf413 + chr3L 22137576 intron olf413 + chr3L 22137652 intron olf413 + chr3L_5_22135001 chr3L_22135001 RAL-802_95b 971 chr3L 22151652 22151704 chr3L 22151755 22151807 4 101 3.5 2.5 3.0 1.0 155 chr3L 22151652 intron olf413 + chr3L 22151730 intron olf413 + chr3L 22151807 intron olf413 + chr3L_4_22150001 chr3L_22150001 RAL-802_95b 972 chr3L 22169436 22169488 chr3L 22169549 22169601 6 113 4.0 4.5 4.2 1.2 165 chr3L 22169436 intron olf413 + chr3L 22169518 intron olf413 + chr3L 22169601 intron olf413 + chr3L_6_22165001 chr3L_22165001 RAL-802_95b 973 chr3L 22447188 22447229 chr3L 22447299 22447340 7 110 1.0 1.5 1.2 3.2 152 chr3L 22447188 intergenic not near genes chr3L 22447264 intergenic not near genes chr3L 22447340 intergenic not near genes chr3L_7_22445001 chr3L_22445001 RAL-802_95b 974 chr3L 22617191 22617210 chr3L 22624663 22624682 blood 4 7472 1.0 2.5 1.8 1.4 7491 chr3L 22617191 intron CG14459 - chr3L 22620936 intron CG14459 - chr3L 22624682 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-802_95b 975 chr3L 22711250 22711287 chr3L 22711395 22711432 5 142 4.0 4.5 4.2 1.0 182 chr3L 22711250 intergenic not near genes chr3L 22711341 intergenic not near genes chr3L 22711432 intergenic not near genes chr3L_5_22710001 chr3L_22710001 RAL-802_95b 976 chr3L 22732449 22732490 chr3L 22732550 22732590 6 96 4.5 6.5 5.5 0.9 141 chr3L 22732449 intron CG11367 + chr3L 22732520 intron CG11367 + chr3L 22732590 exon CG11367 + chr3L_6_22730001 chr3L_22730001 RAL-802_95b 977 chr3L 22761376 22761386 chr3L 22766830 22766840 Ivk 4 5454 7.0 6.5 6.8 0.5 5464 chr3L 22761376 intron SPoCk + chr3L 22764108 intron SPoCk + chr3L 22766840 intron SPoCk + chr3L_4_22760001 chr3L_22760001 RAL-802_95b 978 chr3L 22761387 22761416 chr3L 22766820 22766870 Ivk 10 5448 5.0 4.0 4.5 1.8 5483 chr3L 22761387 intron SPoCk + chr3L 22764128 intron SPoCk + chr3L 22766870 intron SPoCk + chr3L_10_22760001 chr3L_22760001 RAL-802_95b 979 chr3L 22771826 22771852 chr3L 22771923 22771955 5 102 5.0 7.5 6.2 0.7 129 chr3L 22771826 intron SPoCk + chr3L 22771890 intron SPoCk + chr3L 22771955 intron SPoCk + chr3L_5_22770001 chr3L_22770001 RAL-802_95b 980 chr3L 22825541 22825562 chr3L 22825638 22825659 5 97 5.0 10.0 7.5 0.6 118 chr3L 22825541 intron jim - chr3L 22825600 intron jim - chr3L 22825659 intron jim - chr3L_5_22825001 chr3L_22825001 RAL-802_95b 981 chr3L 22853448 22853720 chr3L 22853553 22853826 10 102 1.0 5.0 3.0 2.5 378 chr3L 22853448 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853637 5` UTR CR43426 + chr3L 22853826 5` UTR CR43426 + chr3L_10_22850001 chr3L_22850001 RAL-802_95b 982 chr3L 22865968 22866009 chr3L 22867114 22867157 Doc 10 1150 3.5 6.0 4.8 1.7 1189 chr3L 22865968 intron CG33170 + chr3L 22866562 intron CG33170 + chr3L 22867157 intron CG33170 + chr3L_10_22865001 chr3L_22865001 RAL-802_95b 983 chr3L 22897179 22897212 chr3L 22897282 22897312 5 99 7.5 8.5 8.0 0.6 133 chr3L 22897179 intergenic not near genes chr3L 22897246 intergenic not near genes chr3L 22897312 intergenic not near genes chr3L_5_22895001 chr3L_22895001 RAL-802_95b 984 chr3L 20525229 20525230 chr3L 22908066 22908066 4 2382837 10.0 16.5 13.2 0.3 2382837 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-802_95b 985 chr3L 22908066 22908066 chr3L 24821493 24821494 4 1913428 16.0 2.5 9.2 0.4 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_4_23860001 chr3L_23860001 RAL-802_95b 986 chr3L 22967659 22967671 chr3L 22967737 22967770 7 91 0.0 2.5 1.2 3.2 111 chr3L 22967659 intergenic not near genes chr3L 22967714 intergenic not near genes chr3L 22967770 intergenic not near genes chr3L_7_22965001 chr3L_22965001 RAL-802_95b 987 chr3L 22989849 22989869 chr3L 22996843 22996843 297 5 6988 2.0 1.5 1.8 1.8 6994 chr3L 22989849 intergenic not near genes chr3L 22993346 intergenic not near genes chr3L 22996843 intergenic not near genes chr3L_5_22990001 chr3L_22990001 RAL-802_95b 988 chr3L 22989873 22989895 chr3L 22996836 22996888 297 8 6981 1.0 1.5 1.2 3.6 7015 chr3L 22989873 intergenic not near genes chr3L 22993380 intergenic not near genes chr3L 22996888 intergenic not near genes chr3L_8_22990001 chr3L_22990001 RAL-802_95b 989 chr3L 23011148 23011171 chr3L 23011225 23011268 6 92 11.0 13.0 12.0 0.5 120 chr3L 23011148 intron nrm + chr3L 23011208 intron nrm + chr3L 23011268 intron nrm + chr3L_6_23010001 chr3L_23010001 RAL-802_95b 990 chr3L 23342533 23342576 chr3L 23342639 23342664 4 101 8.5 4.0 6.2 0.6 131 chr3L 23342533 intron CG32230 + chr3L 23342598 intron CG32230 + chr3L 23342664 intron CG32230 + chr3L_4_23340001 chr3L_23340001 RAL-802_95b 991 chr3L 23875505 23875554 chr3L 23875606 23875620 4 86 2.5 1.0 1.8 1.4 115 chr3L 23875505 intron CG40470 - chr3L 23875562 intron CG40470 - chr3L 23875620 intron CG40470 - chr3L_4_23875001 chr3L_23875001 RAL-802_95b 992 chr3L 24036730 24036771 chr3L 24036839 24036863 6 104 6.5 5.0 5.8 0.9 133 chr3L 24036730 intergenic not near genes chr3L 24036796 intergenic not near genes chr3L 24036863 intergenic not near genes chr3L_6_24035001 chr3L_24035001 RAL-802_95b 993 chr3L 24123419 24123447 chr3L 24123526 24123554 7 107 7.5 6.0 6.8 0.9 135 chr3L 24123419 intron Snap25 + chr3L 24123486 intron Snap25 + chr3L 24123554 intron Snap25 + chr3L_7_24120001 chr3L_24120001 RAL-802_95b 994 chr3L 24349937 24349963 chr3L 24352506 24352552 4 2578 4.5 3.0 3.8 0.8 2615 chr3L 24349937 intron nvd + chr3L 24351244 intron nvd + chr3L 24352552 intron nvd + chr3L_4_24350001 chr3L_24350001 RAL-802_95b 995 chr3L 24791879 24791925 chr3L 24796678 24796683 Doc 5 4789 0.5 2.5 1.5 2.0 4804 chr3L 24791879 intergenic not near genes chr3L 24794281 intergenic not near genes chr3L 24796683 intergenic not near genes chr3L_5_24790001 chr3L_24790001 RAL-802_95b 996 chr3L 20525228 20525230 chr3L 24821493 24821493 4 4296264 10.0 2.5 6.2 0.6 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-802_95b 997 chr3L 25887109 25887155 chr3L 25887283 25887322 8 173 3.5 3.0 3.2 1.9 213 chr3L 25887109 intron CG40178 - chr3L 25887216 intron CG40178 - chr3L 25887322 intron CG40178 - chr3L_8_25885001 chr3L_25885001 RAL-802_95b 998 chr3L 26009406 26009456 chr3L 26009516 26009547 6 91 2.5 4.5 3.5 1.3 141 chr3L 26009406 intron CG40178 - chr3L 26009476 intron CG40178 - chr3L 26009547 intron CG40178 - chr3L_6_26005001 chr3L_26005001 RAL-802_95b 999 chr3L 27980684 27980731 chr3L 27985499 27985530 Doc 7 4813 6.5 3.5 5.0 1.2 4846 chr3L 27980684 intron CG17514 - chr3L 27983107 intron CG17514 - chr3L 27985530 intron CG17514 - chr3L_7_27980001 chr3L_27980001 RAL-802_95b 1000 chr3R 1939059 1939083 chr3R 1939153 1939187 4 106 2.0 5.5 3.8 0.8 128 chr3R 1939059 intergenic not near genes chr3R 1939123 intergenic not near genes chr3R 1939187 intergenic not near genes chr3R_4_1935001 chr3R_1935001 RAL-802_95b 1001 chr3R 2556902 2556926 chr3R 2557615 2557639 4 713 11.0 9.5 10.2 0.4 737 chr3R 2556902 intron CG41056 - chr3R 2557270 intron CG41056 - chr3R 2557639 intron CG41056 - chr3R_4_2555001 chr3R_2555001 RAL-802_95b 1002 chr3R 4105020 4105064 chr3R 4110244 4110288 copia 4 5224 0.5 2.5 1.5 1.6 5268 chr3R 4105020 intergenic not near genes chr3R 4107654 intergenic not near genes chr3R 4110288 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-802_95b 1003 chr3R 4206083 4206102 chr3R 4211668 4211696 mdg3 7 5589 3.5 7.0 5.2 1.1 5613 chr3R 4206083 intron CG14636 - chr3R 4208890 intron CG14636 - chr3R 4211696 intron CG14636 - chr3R_7_4205001 chr3R_4205001 RAL-802_95b 1004 chr3R 4366748 4366790 chr3R 4375138 4375188 roo 11 8390 2.5 4.0 3.2 2.6 8440 chr3R 4366748 3` UTR CG1090 + chr3R 4370968 intergenic not near genes chr3R 4375188 5` UTR CR44922 + chr3R_11_4370001 chr3R_4370001 RAL-802_95b 1005 chr3R 4408401 4408431 chr3R 4412715 4412735 Juan 4 4312 4.5 4.5 4.5 0.7 4334 chr3R 4408401 intron CG32944 - chr3R 4410568 intron CG32944 - chr3R 4412735 intron CG32944 - chr3R_4_4410001 chr3R_4410001 RAL-802_95b 1006 chr3R 4568700 4568718 chr3R 4568807 4568825 4 107 3.0 3.0 3.0 1.0 125 chr3R 4568700 intergenic not near genes chr3R 4568762 intergenic not near genes chr3R 4568825 intergenic not near genes chr3R_4_4565001 chr3R_4565001 RAL-802_95b 1007 chr3R 4594323 4594373 chr3R 4594425 4594435 9 87 3.5 3.5 3.5 2.0 112 chr3R 4594323 intergenic not near genes chr3R 4594379 intergenic not near genes chr3R 4594435 intergenic not near genes chr3R_9_4590001 chr3R_4590001 RAL-802_95b 1008 chr3R 4609541 4609574 chr3R 4610711 4610758 1360 6 1178 1.0 3.0 2.0 2.0 1217 chr3R 4609541 intergenic not near genes chr3R 4610150 intergenic not near genes chr3R 4610758 intergenic not near genes chr3R_6_4610001 chr3R_4610001 RAL-802_95b 1009 chr3R 4739099 4739146 chr3R 4739196 4739241 7 96 11.5 16.5 14.0 0.5 142 chr3R 4739099 intron tacc - chr3R 4739170 intron tacc - chr3R 4739241 intron tacc - chr3R_7_4735001 chr3R_4735001 RAL-802_95b 1010 chr3R 4913731 4913758 chr3R 4913828 4913864 5 98 6.5 4.5 5.5 0.8 133 chr3R 4913731 intron Cdep + chr3R 4913798 intron Cdep + chr3R 4913864 intron Cdep + chr3R_5_4910001 chr3R_4910001 RAL-802_95b 1011 chr3R 4943595 4943621 chr3R 4943720 4943734 6 122 12.5 5.0 8.8 0.6 139 chr3R 4943595 intron Cdep + chr3R 4943664 intron Cdep + chr3R 4943734 intron Cdep + chr3R_6_4940001 chr3R_4940001 RAL-802_95b 1012 chr3R 4965993 4966036 chr3R 4966105 4966148 4 112 3.5 1.5 2.5 1.1 155 chr3R 4965993 intron CG1124 + chr3R 4966070 intron CG1124 + chr3R 4966148 intron CG1124 + chr3R_4_4965001 chr3R_4965001 RAL-802_95b 1013 chr3R 4975912 4975966 chr3R 4976033 4976087 18 116 1.5 2.5 2.0 6.0 175 chr3R 4975912 intergenic not near genes chr3R 4976000 intergenic not near genes chr3R 4976087 intergenic not near genes chr3R_18_4975001 chr3R_4975001 RAL-802_95b 1014 chr3R 5045824 5045868 chr3R 5052946 5052990 HMS-Beagle 9 7118 3.0 4.0 3.5 2.0 7166 chr3R 5045824 3` UTR CR43635 - chr3R 5049407 intergenic not near genes chr3R 5052990 intergenic CR45588 - chr3R_9_5045001 chr3R_5045001 RAL-802_95b 1015 chr3R 5067971 5068008 chr3R 5073508 5073545 mdg3 8 5534 4.5 6.5 5.5 1.2 5574 chr3R 5067971 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073545 intergenic not near genes chr3R_8_5070001 chr3R_5070001 RAL-802_95b 1016 chr3R 5158138 5158172 chr3R 5158250 5158282 4 112 4.0 1.5 2.8 1.1 144 chr3R 5158138 intron dpr16 + chr3R 5158210 intron dpr16 + chr3R 5158282 intron dpr16 + chr3R_4_5155001 chr3R_5155001 RAL-802_95b 1017 chr3R 5206790 5206838 chr3R 5206952 5206990 6 159 6.0 4.5 5.2 1.0 200 chr3R 5206790 intron cno - chr3R 5206890 intron cno - chr3R 5206990 intron cno - chr3R_6_5205001 chr3R_5205001 RAL-802_95b 1018 chr3R 5278083 5278122 chr3R 5278174 5278213 4 96 6.0 8.5 7.2 0.5 130 chr3R 5278083 intron mtd - chr3R 5278148 intron mtd - chr3R 5278213 intron mtd - chr3R_4_5275001 chr3R_5275001 RAL-802_95b 1019 chr3R 5338381 5338419 chr3R 5343578 5343616 Rt1c 8 5196 6.0 1.0 3.5 1.8 5235 chr3R 5338381 intron mtd - chr3R 5340998 intron mtd - chr3R 5343616 intron mtd - chr3R_8_5340001 chr3R_5340001 RAL-802_95b 1020 chr3R 5445963 5445985 chr3R 5452422 5452465 Burdock 4 6472 3.0 4.0 3.5 0.9 6502 chr3R 5445963 intron CG14669 + chr3R 5449214 intron CG14669 + chr3R 5452465 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-802_95b 1021 chr3R 5627128 5627180 chr3R 5627559 5627608 13 420 3.0 3.0 3.0 3.2 480 chr3R 5627128 intergenic not near genes chr3R 5627368 intergenic CG31551 + chr3R 5627608 intergenic CG31551 + chr3R_13_5625001 chr3R_5625001 RAL-802_95b 1022 chr3R 5726092 5726119 chr3R 5726264 5726292 8 177 13.5 16.0 14.8 0.5 200 chr3R 5726092 intergenic not near genes chr3R 5726192 intergenic not near genes chr3R 5726292 intergenic not near genes chr3R_8_5725001 chr3R_5725001 RAL-802_95b 1023 chr3R 5734632 5734679 chr3R 5734741 5734788 5 101 9.5 10.5 10.0 0.5 156 chr3R 5734632 exon CG1239 + chr3R 5734710 3` UTR CG2100 - chr3R 5734788 exon CG2100 - chr3R_5_5730001 chr3R_5730001 RAL-802_95b 1024 chr3R 5746997 5747044 chr3R 5753208 5753255 diver 14 6208 2.0 3.5 2.8 3.7 6258 chr3R 5746997 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753255 intergenic CG2091 - chr3R_14_5750001 chr3R_5750001 RAL-802_95b 1025 chr3R 5772385 5772401 chr3R 5772553 5772579 6 175 1.5 4.5 3.0 1.5 194 chr3R 5772385 intron CG2082 - chr3R 5772482 intron CG2082 - chr3R 5772579 intron CG2082 - chr3R_6_5770001 chr3R_5770001 RAL-802_95b 1026 chr3R 5809092 5809141 chr3R 5809353 5809402 pogo 8 254 3.0 4.5 3.8 1.7 310 chr3R 5809092 3` UTR CG11000 + chr3R 5809247 3` UTR CG11000 + chr3R 5809402 3` UTR CG11000 + chr3R_8_5805001 chr3R_5805001 RAL-802_95b 1027 chr3R 5822364 5822411 chr3R 5823551 5823587 1360 7 1184 2.0 4.0 3.0 1.8 1223 chr3R 5822364 3` UTR CG2023 - chr3R 5822976 3` UTR CG2023 - chr3R 5823587 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 RAL-802_95b 1028 chr3R 5860573 5860577 chr3R 5860686 5860700 4 117 10.0 14.5 12.2 0.3 127 chr3R 5860573 intron CG2017 - chr3R 5860636 intron CG2017 - chr3R 5860700 intron CG2017 - chr3R_4_5860001 chr3R_5860001 RAL-802_95b 1029 chr3R 5927568 5927582 chr3R 5927805 5927827 pogo 4 249 2.0 2.0 2.0 1.3 259 chr3R 5927568 intron CG34113 - chr3R 5927698 intron CG34113 - chr3R 5927827 intron CG34113 - chr3R_4_5925001 chr3R_5925001 RAL-802_95b 1030 chr3R 5954316 5954346 chr3R 5954412 5954434 9 94 8.5 8.5 8.5 0.9 118 chr3R 5954316 intron CG34113 - chr3R 5954375 intron CG34113 - chr3R 5954434 intron CG34113 - chr3R_9_5950001 chr3R_5950001 RAL-802_95b 1031 chr3R 5992030 5992063 chr3R 5992167 5992200 5 136 6.5 5.5 6.0 0.7 170 chr3R 5992030 intergenic not near genes chr3R 5992115 intergenic not near genes chr3R 5992200 intergenic not near genes chr3R_5_5990001 chr3R_5990001 RAL-802_95b 1032 chr3R 6175153 6175198 chr3R 6182445 6182479 HMS-Beagle2 11 7284 2.0 1.0 1.5 4.4 7326 chr3R 6175153 intergenic Osi1 + chr3R 6178816 intron CR45194 + chr3R 6182479 intergenic CR45194 + chr3R_11_6175001 chr3R_6175001 RAL-802_95b 1033 chr3R 6191150 6191193 chr3R 6191250 6191293 6 95 4.0 3.5 3.8 1.2 143 chr3R 6191150 intron NPFR + chr3R 6191222 intron NPFR + chr3R 6191293 intron NPFR + chr3R_6_6190001 chr3R_6190001 RAL-802_95b 1034 chr3R 6194631 6194684 chr3R 6195347 6195401 9 709 5.0 6.5 5.8 1.3 770 chr3R 6194631 intron NPFR + chr3R 6195016 3` UTR NPFR + chr3R 6195401 3` UTR NPFR + chr3R_9_6195001 chr3R_6195001 RAL-802_95b 1035 chr3R 6283296 6283337 chr3R 6283393 6283444 10 104 6.0 4.5 5.2 1.6 148 chr3R 6283296 intergenic not near genes chr3R 6283370 intergenic not near genes chr3R 6283444 intergenic not near genes chr3R_10_6280001 chr3R_6280001 RAL-802_95b 1036 chr3R 6407987 6408004 chr3R 6408138 6408152 4 149 8.0 12.5 10.2 0.4 165 chr3R 6407987 intron gpp + chr3R 6408070 intron gpp + chr3R 6408152 intron gpp + chr3R_4_6405001 chr3R_6405001 RAL-802_95b 1037 chr3R 6428806 6428825 chr3R 6428928 6428947 4 122 7.0 6.5 6.8 0.5 141 chr3R 6428806 intron gpp + chr3R 6428876 intron gpp + chr3R 6428947 intron gpp + chr3R_4_6425001 chr3R_6425001 RAL-802_95b 1038 chr3R 6510009 6510055 chr3R 6515110 6515155 jockey 9 5100 3.5 1.5 2.5 2.6 5146 chr3R 6510009 intergenic not near genes chr3R 6512582 intergenic not near genes chr3R 6515155 intergenic not near genes chr3R_9_6510001 chr3R_6510001 RAL-802_95b 1039 chr3R 6624246 6624282 chr3R 6624348 6624384 6 98 6.5 4.0 5.2 1.0 138 chr3R 6624246 intergenic not near genes chr3R 6624315 intergenic not near genes chr3R 6624384 intergenic not near genes chr3R_6_6620001 chr3R_6620001 RAL-802_95b 1040 chr3R 6655750 6655796 chr3R 6656035 6656088 7 287 8.5 10.5 9.5 0.7 338 chr3R 6655750 exon Taf1 + chr3R 6655919 3` UTR Taf1 + chr3R 6656088 intergenic Taf1 +,CG1307 - chr3R_7_6655001 chr3R_6655001 RAL-802_95b 1041 chr3R 6705666 6705705 chr3R 6705910 6705932 10 242 5.5 7.0 6.2 1.4 266 chr3R 6705666 intergenic not near genes chr3R 6705799 intergenic not near genes chr3R 6705932 intergenic not near genes chr3R_10_6705001 chr3R_6705001 RAL-802_95b 1042 chr3R 6804176 6804223 chr3R 6804305 6804352 8 123 1.0 0.0 0.5 5.3 176 chr3R 6804176 intergenic not near genes chr3R 6804264 intergenic not near genes chr3R 6804352 intergenic not near genes chr3R_8_6800001 chr3R_6800001 RAL-802_95b 1043 chr3R 6819613 6819653 chr3R 6819717 6819757 6 103 5.0 8.0 6.5 0.8 144 chr3R 6819613 intergenic not near genes chr3R 6819685 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819757 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R_6_6815001 chr3R_6815001 RAL-802_95b 1044 chr3R 6828006 6828039 chr3R 6828102 6828135 6 93 7.0 5.0 6.0 0.9 129 chr3R 6828006 intron Scr - chr3R 6828070 intron Scr - chr3R 6828135 intron Scr - chr3R_6_6825001 chr3R_6825001 RAL-802_95b 1045 chr3R 6891227 6891270 chr3R 6891313 6891346 6 84 0.5 1.5 1.0 3.0 119 chr3R 6891227 intergenic not near genes chr3R 6891286 intergenic not near genes chr3R 6891346 intergenic not near genes chr3R_6_6890001 chr3R_6890001 RAL-802_95b 1046 chr3R 7126498 7126519 chr3R 7126612 7126614 5 111 10.5 13.5 12.0 0.4 116 chr3R 7126498 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126556 3` UTR CG10068 - chr3R 7126614 3` UTR CG10068 - chr3R_5_7125001 chr3R_7125001 RAL-802_95b 1047 chr3R 7132825 7132870 chr3R 7132933 7132964 5 106 7.0 9.0 8.0 0.6 139 chr3R 7132825 intergenic CG31493 + chr3R 7132894 intergenic CG31493 + chr3R 7132964 intergenic CG31493 + chr3R_5_7130001 chr3R_7130001 RAL-802_95b 1048 chr3R 7173658 7173710 chr3R 7173758 7173797 4 97 1.5 4.5 3.0 1.0 139 chr3R 7173658 intron sas + chr3R 7173728 intron sas + chr3R 7173797 intron sas + chr3R_4_7170001 chr3R_7170001 RAL-802_95b 1049 chr3R 7217441 7217485 chr3R 7217682 7217719 6 237 8.0 8.5 8.2 0.7 278 chr3R 7217441 intergenic CG14605 -,CG14606 - chr3R 7217580 intergenic CG14605 -,CG14606 - chr3R 7217719 3` UTR CG14605 - chr3R_6_7215001 chr3R_7215001 RAL-802_95b 1050 chr3R 7269904 7269925 chr3R 7270018 7270029 5 110 8.0 8.0 8.0 0.6 125 chr3R 7269904 3` UTR Syt4 + chr3R 7269966 3` UTR Syt4 + chr3R 7270029 3` UTR Syt4 + chr3R_5_7265001 chr3R_7265001 RAL-802_95b 1051 chr3R 7278064 7278078 chr3R 7278196 7278215 4 133 3.0 6.5 4.8 0.7 151 chr3R 7278064 intron rn - chr3R 7278140 intron rn - chr3R 7278215 intron rn - chr3R_4_7275001 chr3R_7275001 RAL-802_95b 1052 chr3R 7281036 7281080 chr3R 7281147 7281177 8 110 5.0 6.0 5.5 1.2 141 chr3R 7281036 intron rn - chr3R 7281106 intron rn - chr3R 7281177 intron rn - chr3R_8_7280001 chr3R_7280001 RAL-802_95b 1053 chr3R 7396051 7396086 chr3R 7396151 7396161 4 101 2.5 3.0 2.8 1.1 110 chr3R 7396051 intergenic not near genes chr3R 7396106 intergenic not near genes chr3R 7396161 intergenic not near genes chr3R_4_7395001 chr3R_7395001 RAL-802_95b 1054 chr3R 7396355 7396367 chr3R 7396478 7396490 4 123 5.0 5.5 5.2 0.6 135 chr3R 7396355 intergenic not near genes chr3R 7396422 intergenic not near genes chr3R 7396490 intergenic not near genes chr3R_4_7395001 chr3R_7395001 RAL-802_95b 1055 chr3R 7404945 7404970 chr3R 7405041 7405066 4 94 0.0 3.5 1.8 1.4 121 chr3R 7404945 intergenic not near genes chr3R 7405006 intergenic not near genes chr3R 7405066 intergenic not near genes chr3R_4_7405001 chr3R_7405001 RAL-802_95b 1056 chr3R 7447974 7447992 chr3R 7448072 7448090 4 98 5.5 8.5 7.0 0.5 116 chr3R 7447974 intergenic not near genes chr3R 7448032 intergenic not near genes chr3R 7448090 intergenic not near genes chr3R_4_7445001 chr3R_7445001 RAL-802_95b 1057 chr3R 7461737 7461749 chr3R 7462270 7462323 4 562 2.5 5.0 3.8 0.8 586 chr3R 7461737 intergenic not near genes chr3R 7462030 intergenic not near genes chr3R 7462323 intergenic not near genes chr3R_4_7460001 chr3R_7460001 RAL-802_95b 1058 chr3R 7542443 7542469 chr3R 7542541 7542566 8 94 2.5 0.0 1.2 3.6 123 chr3R 7542443 intron alpha-Est2 + chr3R 7542504 intron alpha-Est2 + chr3R 7542566 intron alpha-Est2 + chr3R_8_7540001 chr3R_7540001 RAL-802_95b 1059 chr3R 7548590 7548631 chr3R 7548689 7548730 4 99 10.5 13.5 12.0 0.3 140 chr3R 7548590 intron alpha-Est1 - chr3R 7548660 intron alpha-Est1 - chr3R 7548730 intron alpha-Est1 - chr3R_4_7545001 chr3R_7545001 RAL-802_95b 1060 chr3R 7556917 7556949 chr3R 7557029 7557062 4 110 3.0 5.0 4.0 0.8 145 chr3R 7556917 intergenic not near genes chr3R 7556990 intergenic not near genes chr3R 7557062 intergenic not near genes chr3R_4_7555001 chr3R_7555001 RAL-802_95b 1061 chr3R 7635649 7635683 chr3R 7635741 7635782 4 99 1.0 6.0 3.5 0.9 133 chr3R 7635649 intron CG34127 - chr3R 7635716 intron CG34127 - chr3R 7635782 intron CG34127 - chr3R_4_7635001 chr3R_7635001 RAL-802_95b 1062 chr3R 7677911 7677945 chr3R 7678044 7678078 4 132 4.0 3.0 3.5 0.9 167 chr3R 7677911 intron Nlg1 + chr3R 7677994 intron Nlg1 + chr3R 7678078 intron Nlg1 + chr3R_4_7675001 chr3R_7675001 RAL-802_95b 1063 chr3R 7694556 7694608 chr3R 7713637 7713689 invader3 12 19078 1.5 0.5 1.0 6.0 19133 chr3R 7694556 3` UTR Nlg1 + chr3R 7704122 intergenic not near genes chr3R 7713689 intergenic not near genes chr3R_12_7700001 chr3R_7700001 RAL-802_95b 1064 chr3R 7849623 7849666 chr3R 7850810 7850834 1360 6 1181 3.0 4.5 3.8 1.2 1211 chr3R 7849623 intron CG34384 + chr3R 7850228 intron CG34384 + chr3R 7850834 intron CG34384 + chr3R_6_7850001 chr3R_7850001 RAL-802_95b 1065 chr3R 7857630 7857663 chr3R 7857733 7857765 5 98 6.5 6.5 6.5 0.7 135 chr3R 7857630 3` UTR CG17816 - chr3R 7857698 3` UTR CG17816 - chr3R 7857765 3` UTR CG17816 - chr3R_5_7855001 chr3R_7855001 RAL-802_95b 1066 chr3R 7951448 7951485 chr3R 7951566 7951599 5 117 21.0 20.0 20.5 0.2 151 chr3R 7951448 intron dsx - chr3R 7951524 intron dsx - chr3R 7951599 intron dsx - chr3R_5_7950001 chr3R_7950001 RAL-802_95b 1067 chr3R 7973301 7973336 chr3R 7974383 7974418 1360 9 1082 2.5 5.0 3.8 1.9 1117 chr3R 7973301 intergenic not near genes chr3R 7973860 intergenic not near genes chr3R 7974418 3` UTR CD98hc - chr3R_9_7970001 chr3R_7970001 RAL-802_95b 1068 chr3R 8033126 8033160 chr3R 8033226 8033253 5 98 8.5 6.0 7.2 0.6 127 chr3R 8033126 intergenic CG11035 -,unc-45 + chr3R 8033190 intergenic unc-45 +,CG11035 - chr3R 8033253 intergenic unc-45 +,CG11035 - chr3R_5_8030001 chr3R_8030001 RAL-802_95b 1069 chr3R 8090250 8090301 chr3R 8090447 8090498 18 192 4.0 2.0 3.0 4.5 248 chr3R 8090250 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090498 intergenic CR44330 + chr3R_18_8090001 chr3R_8090001 RAL-802_95b 1070 chr3R 8094391 8094432 chr3R 8099716 8099747 Transpac 11 5322 4.5 3.0 3.8 2.3 5356 chr3R 8094391 intron CG7900 + chr3R 8097069 intron CG7900 + chr3R 8099747 intron CG7900 + chr3R_11_8095001 chr3R_8095001 RAL-802_95b 1071 chr3R 8182669 8182682 chr3R 8182745 8182745 4 90 2.0 2.0 2.0 1.3 76 chr3R 8182669 intergenic not near genes chr3R 8182707 intergenic not near genes chr3R 8182745 intergenic not near genes chr3R_4_8180001 chr3R_8180001 RAL-802_95b 1072 chr3R 8183482 8183526 chr3R 8183590 8183634 11 107 7.5 5.5 6.5 1.5 152 chr3R 8183482 intergenic not near genes chr3R 8183558 intergenic not near genes chr3R 8183634 intergenic not near genes chr3R_11_8180001 chr3R_8180001 RAL-802_95b 1073 chr3R 8188405 8188522 chr3R 8188476 8188633 6 98 11.0 5.0 8.0 0.7 228 chr3R 8188405 intergenic not near genes chr3R 8188519 intergenic not near genes chr3R 8188633 intergenic not near genes chr3R_6_8185001 chr3R_8185001 RAL-802_95b 1074 chr3R 8236709 8236755 chr3R 8236828 8236874 7 110 10.5 12.0 11.2 0.6 165 chr3R 8236709 3` UTR,3` UTR DNApol-iota +,Ada2b - chr3R 8236792 3` UTR,3` UTR DNApol-iota +,Ada2b - chr3R 8236874 3` UTR,3` UTR DNApol-iota +,Ada2b - chr3R_7_8235001 chr3R_8235001 RAL-802_95b 1075 chr3R 8273720 8273766 chr3R 8273827 8273873 5 107 7.0 9.5 8.2 0.5 153 chr3R 8273720 intergenic not near genes chr3R 8273796 intergenic not near genes chr3R 8273873 intergenic not near genes chr3R_5_8270001 chr3R_8270001 RAL-802_95b 1076 chr3R 8334283 8334332 chr3R 8334452 8334501 6 162 7.0 3.0 5.0 1.0 218 chr3R 8334283 intergenic Poxm - chr3R 8334392 intergenic not near genes chr3R 8334501 intergenic not near genes chr3R_6_8330001 chr3R_8330001 RAL-802_95b 1077 chr3R 8393593 8393604 chr3R 8393664 8393676 7 87 0.0 2.0 1.0 3.5 83 chr3R 8393593 intron CG45263 - chr3R 8393634 intron CG45263 - chr3R 8393676 intron CG45263 - chr3R_7_8390001 chr3R_8390001 RAL-802_95b 1078 chr3R 8470771 8470817 chr3R 8470879 8470925 6 108 4.0 3.0 3.5 1.3 154 chr3R 8470771 intron CG45263 - chr3R 8470848 intron CG45263 - chr3R 8470925 intron CG45263 - chr3R_6_8470001 chr3R_8470001 RAL-802_95b 1079 chr3R 8671384 8671432 chr3R 8671488 8671526 11 99 4.0 5.0 4.5 2.0 142 chr3R 8671384 intron CG8036 + chr3R 8671455 intron CG8036 + chr3R 8671526 intron CG8036 + chr3R_11_8670001 chr3R_8670001 RAL-802_95b 1080 chr3R 8743177 8743211 chr3R 8743279 8743308 6 101 7.0 3.5 5.2 1.0 131 chr3R 8743177 intron CG9801 - chr3R 8743242 intron CG9801 - chr3R 8743308 intron CG9801 - chr3R_6_8740001 chr3R_8740001 RAL-802_95b 1081 chr3R 8745731 8745771 chr3R 8745862 8745902 10 127 4.5 3.5 4.0 2.0 171 chr3R 8745731 intron CG9801 - chr3R 8745816 intron CG9801 - chr3R 8745902 intron CG9801 - chr3R_10_8745001 chr3R_8745001 RAL-802_95b 1082 chr3R 8756289 8756318 chr3R 8756365 8756414 8 92 4.0 5.5 4.8 1.4 125 chr3R 8756289 intron,intron CG11768 -,CG34135 - chr3R 8756352 intron,intron CG11768 -,CG34135 - chr3R 8756414 intron,intron CG11768 -,CG34135 - chr3R_8_8755001 chr3R_8755001 RAL-802_95b 1083 chr3R 8807573 8807611 chr3R 8807701 8807739 8 127 13.0 13.0 13.0 0.6 166 chr3R 8807573 3` UTR hng2 + chr3R 8807656 intergenic hng2 + chr3R 8807739 intergenic hng2 + chr3R_8_8805001 chr3R_8805001 RAL-802_95b 1084 chr3R 8855630 8855677 chr3R 8855730 8855777 5 100 8.0 10.5 9.2 0.5 147 chr3R 8855630 intron pyd - chr3R 8855704 intron pyd - chr3R 8855777 intron pyd - chr3R_5_8855001 chr3R_8855001 RAL-802_95b 1085 chr3R 8894852 8894900 chr3R 8896028 8896060 1360 9 1171 4.5 1.5 3.0 2.2 1208 chr3R 8894852 intron pyd - chr3R 8895456 intron pyd - chr3R 8896060 intron pyd - chr3R_9_8895001 chr3R_8895001 RAL-802_95b 1086 chr3R 9036361 9036404 chr3R 9036459 9036502 5 93 17.5 18.0 17.8 0.3 141 chr3R 9036361 intron neur - chr3R 9036432 intron neur - chr3R 9036502 intron neur - chr3R_5_9035001 chr3R_9035001 RAL-802_95b 1087 chr3R 9055211 9055259 chr3R 9055322 9055370 5 111 6.5 8.0 7.2 0.6 159 chr3R 9055211 intron Kdm2 + chr3R 9055290 intron Kdm2 + chr3R 9055370 intron Kdm2 + chr3R_5_9055001 chr3R_9055001 RAL-802_95b 1088 chr3R 9069474 9069520 chr3R 9069573 9069606 8 94 8.5 7.0 7.8 0.9 132 chr3R 9069474 3` UTR pum - chr3R 9069540 3` UTR pum - chr3R 9069606 3` UTR pum - chr3R_8_9065001 chr3R_9065001 RAL-802_95b 1089 chr3R 9141148 9141170 chr3R 9141251 9141266 4 102 5.5 9.5 7.5 0.5 118 chr3R 9141148 intron pum - chr3R 9141207 intron pum - chr3R 9141266 intron pum - chr3R_4_9140001 chr3R_9140001 RAL-802_95b 1090 chr3R 9319563 9319603 chr3R 9320018 9320036 jockey 5 451 1.5 2.0 1.8 1.8 473 chr3R 9319563 intron CG8861 - chr3R 9319800 intron CG8861 - chr3R 9320036 intron CG8861 - chr3R_5_9315001 chr3R_9315001 RAL-802_95b 1091 chr3R 9329917 9329932 chr3R 9330006 9330029 4 92 4.5 4.0 4.2 0.8 112 chr3R 9329917 exon CG12951 - chr3R 9329973 exon CG12951 - chr3R 9330029 intron CG12951 - chr3R_4_9325001 chr3R_9325001 RAL-802_95b 1092 chr3R 9347615 9347656 chr3R 9347732 9347773 8 116 5.5 9.0 7.2 1.0 158 chr3R 9347615 intron CG45050 + chr3R 9347694 intron CG45050 + chr3R 9347773 intron CG45050 + chr3R_8_9345001 chr3R_9345001 RAL-802_95b 1093 chr3R 9361813 9361845 chr3R 9362074 9362106 pogo 5 261 3.0 7.0 5.0 0.8 293 chr3R 9361813 3` UTR CG45050 + chr3R 9361960 3` UTR CG45050 + chr3R 9362106 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-802_95b 1094 chr3R 9376892 9376923 chr3R 9385367 9385382 6 8466 4.0 3.0 3.5 1.3 8490 chr3R 9376892 intron FER - chr3R 9381137 intron FER - chr3R 9385382 intron FER - chr3R_6_9380001 chr3R_9380001 RAL-802_95b 1095 chr3R 9447437 9447449 chr3R 9447561 9447573 4 124 6.5 4.0 5.2 0.6 136 chr3R 9447437 intron ps + chr3R 9447505 intron ps + chr3R 9447573 intron ps + chr3R_4_9445001 chr3R_9445001 RAL-802_95b 1096 chr3R 9487999 9488044 chr3R 9488147 9488192 5 145 8.5 10.0 9.2 0.5 193 chr3R 9487999 intron CG16779 - chr3R 9488096 intron CG16779 - chr3R 9488192 intron CG16779 - chr3R_5_9485001 chr3R_9485001 RAL-802_95b 1097 chr3R 9582270 9582285 chr3R 9582573 9582588 6 302 9.0 9.0 9.0 0.6 318 chr3R 9582270 intron CG8301 + chr3R 9582429 intron CG8301 + chr3R 9582588 intron,exon CG8301 +,CG33654 - chr3R_6_9580001 chr3R_9580001 RAL-802_95b 1098 chr3R 9610835 9610864 chr3R 9610996 9611027 5 160 8.0 5.0 6.5 0.7 192 chr3R 9610835 intron CG8312 + chr3R 9610931 intron CG8312 + chr3R 9611027 intron CG8312 + chr3R_5_9610001 chr3R_9610001 RAL-802_95b 1099 chr3R 9611858 9611893 chr3R 9611960 9611974 10 98 8.5 0.0 4.2 1.9 116 chr3R 9611858 intron CG8312 + chr3R 9611916 intron CG8312 + chr3R 9611974 intron CG8312 + chr3R_10_9610001 chr3R_9610001 RAL-802_95b 1100 chr3R 9699958 9700002 chr3R 9700066 9700097 1360 9 99 4.0 6.0 5.0 1.5 139 chr3R 9699958 intron Unc-115a - chr3R 9700028 intron Unc-115a - chr3R 9700097 intron Unc-115a - chr3R_9_9700001 chr3R_9700001 RAL-802_95b 1101 chr3R 9898599 9898613 chr3R 9898702 9898732 4 109 6.5 3.0 4.8 0.7 133 chr3R 9898599 intron Glut4EF + chr3R 9898666 intron Glut4EF + chr3R 9898732 intron Glut4EF + chr3R_4_9895001 chr3R_9895001 RAL-802_95b 1102 chr3R 9936873 9937096 chr3R 9936969 9937165 4 80 3.0 5.5 4.2 0.8 292 chr3R 9936873 intron Glut4EF + chr3R 9937019 intron Glut4EF + chr3R 9937165 intron Glut4EF + chr3R_4_9935001 chr3R_9935001 RAL-802_95b 1103 chr3R 10099896 10099944 chr3R 10100000 10100048 5 96 3.0 4.5 3.8 1.0 152 chr3R 10099896 5` UTR CR43459 + chr3R 10099972 5` UTR CR43459 + chr3R 10100048 5` UTR,5` UTR CR43459 +,mir-277 + chr3R_5_10095001 chr3R_10095001 RAL-802_95b 1104 chr3R 10231769 10231813 chr3R 10237366 10237394 mdg3 6 5594 5.0 1.5 3.2 1.4 5625 chr3R 10231769 intron CG42795 + chr3R 10234582 intron CG42795 + chr3R 10237394 intron CG42795 + chr3R_6_10230001 chr3R_10230001 RAL-802_95b 1105 chr3R 10255363 10255385 chr3R 10260823 10260845 I-element 9 5457 9.0 2.5 5.8 1.3 5482 chr3R 10255363 3` UTR Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260845 exon Sirt6 - chr3R_9_10255001 chr3R_10255001 RAL-802_95b 1106 chr3R 10277118 10277159 chr3R 10277218 10277252 5 99 3.0 3.5 3.2 1.2 134 chr3R 10277118 intron CG43143 + chr3R 10277185 intron CG43143 + chr3R 10277252 intron CG43143 + chr3R_5_10275001 chr3R_10275001 RAL-802_95b 1107 chr3R 10306956 10307003 chr3R 10312202 10312242 6 5242 7.0 19.0 13.0 0.4 5286 chr3R 10306956 exon CG43143 + chr3R 10309599 exon CG6293 - chr3R 10312242 3` UTR Bruce - chr3R_6_10305001 chr3R_10305001 RAL-802_95b 1108 chr3R 10627606 10627628 chr3R 10627728 10627756 4 126 10.5 7.5 9.0 0.4 150 chr3R 10627606 intergenic not near genes chr3R 10627681 intergenic not near genes chr3R 10627756 intergenic not near genes chr3R_4_10625001 chr3R_10625001 RAL-802_95b 1109 chr3R 10777859 10777899 chr3R 10777962 10778002 10 100 8.5 8.5 8.5 1.1 143 chr3R 10777859 intergenic CG45076 -,fau -,CG45078 - chr3R 10777930 intergenic not near genes chr3R 10778002 intergenic not near genes chr3R_10_10775001 chr3R_10775001 RAL-802_95b 1110 chr3R 10804156 10804197 chr3R 10811708 10811749 17.6 4 7549 7.5 8.0 7.8 0.5 7593 chr3R 10804156 intergenic CG14692 - chr3R 10807952 intergenic not near genes chr3R 10811749 3` UTR CG14693 - chr3R_4_10805001 chr3R_10805001 RAL-802_95b 1111 chr3R 10910979 10911023 chr3R 10911119 10911163 6 134 4.0 7.0 5.5 0.9 184 chr3R 10910979 intergenic not near genes chr3R 10911071 intergenic not near genes chr3R 10911163 intergenic not near genes chr3R_6_10910001 chr3R_10910001 RAL-802_95b 1112 chr3R 10919697 10919716 chr3R 10919774 10919814 5 92 2.5 1.0 1.8 1.8 117 chr3R 10919697 intergenic not near genes chr3R 10919756 intergenic not near genes chr3R 10919814 intergenic not near genes chr3R_5_10915001 chr3R_10915001 RAL-802_95b 1113 chr3R 10935735 10935771 chr3R 10935837 10935874 4 103 6.0 3.5 4.8 0.7 139 chr3R 10935735 intergenic not near genes chr3R 10935804 intergenic not near genes chr3R 10935874 intergenic not near genes chr3R_4_10935001 chr3R_10935001 RAL-802_95b 1114 chr3R 10942204 10942252 chr3R 10942306 10942329 6 87 5.0 7.0 6.0 0.9 125 chr3R 10942204 intergenic not near genes chr3R 10942266 intergenic not near genes chr3R 10942329 intergenic not near genes chr3R_6_10940001 chr3R_10940001 RAL-802_95b 1115 chr3R 10965373 10965390 chr3R 10965509 10965510 7 136 5.5 7.5 6.5 0.9 137 chr3R 10965373 intergenic not near genes chr3R 10965442 intergenic not near genes chr3R 10965510 intergenic not near genes chr3R_7_10965001 chr3R_10965001 RAL-802_95b 1116 chr3R 11022237 11022259 chr3R 11022409 11022431 4 171 1.5 3.5 2.5 1.1 194 chr3R 11022237 intron CG34114 + chr3R 11022334 intron CG34114 + chr3R 11022431 intron CG34114 + chr3R_4_11020001 chr3R_11020001 RAL-802_95b 1117 chr3R 11103149 11103165 chr3R 11103251 11103267 4 99 0.0 0.0 0.0 4.0 118 chr3R 11103149 intergenic not near genes chr3R 11103208 intergenic not near genes chr3R 11103267 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-802_95b 1118 chr3R 11181189 11181235 chr3R 11181292 11181338 6 99 3.0 4.5 3.8 1.2 149 chr3R 11181189 intergenic not near genes chr3R 11181264 intergenic not near genes chr3R 11181338 intergenic not near genes chr3R_6_11180001 chr3R_11180001 RAL-802_95b 1119 chr3R 11263382 11263422 chr3R 11263486 11263526 4 103 3.5 4.5 4.0 0.8 144 chr3R 11263382 intergenic not near genes chr3R 11263454 intergenic not near genes chr3R 11263526 intergenic not near genes chr3R_4_11260001 chr3R_11260001 RAL-802_95b 1120 chr3R 11379243 11379261 chr3R 11388392 11388427 roo 4 9166 3.0 0.5 1.8 1.4 9184 chr3R 11379243 intron pros + chr3R 11383835 intron pros + chr3R 11388427 intron pros + chr3R_4_11380001 chr3R_11380001 RAL-802_95b 1121 chr3R 11404921 11404955 chr3R 11405021 11405055 4 96 16.5 13.0 14.8 0.3 134 chr3R 11404921 3` UTR pros + chr3R 11404988 3` UTR pros + chr3R 11405055 3` UTR pros + chr3R_4_11400001 chr3R_11400001 RAL-802_95b 1122 chr3R 11406268 11406296 chr3R 11406365 11406393 4 97 7.5 3.5 5.5 0.6 125 chr3R 11406268 3` UTR pros + chr3R 11406330 3` UTR pros + chr3R 11406393 3` UTR pros + chr3R_4_11405001 chr3R_11405001 RAL-802_95b 1123 chr3R 11455570 11455609 chr3R 11455711 11455755 7 144 5.5 10.0 7.8 0.8 185 chr3R 11455570 intron,intron CG17230 +,PGRP-LB - chr3R 11455662 intron,intron CG17230 +,PGRP-LB - chr3R 11455755 intron,intron CG17230 +,PGRP-LB - chr3R_7_11455001 chr3R_11455001 RAL-802_95b 1124 chr3R 11476940 11476971 chr3R 11477062 11477077 4 118 3.0 3.5 3.2 1.0 137 chr3R 11476940 intergenic not near genes chr3R 11477008 intergenic not near genes chr3R 11477077 intergenic not near genes chr3R_4_11475001 chr3R_11475001 RAL-802_95b 1125 chr3R 11518824 11518845 chr3R 11518906 11518946 4 98 3.5 0.5 2.0 1.3 122 chr3R 11518824 intergenic not near genes chr3R 11518885 intergenic not near genes chr3R 11518946 intergenic not near genes chr3R_4_11515001 chr3R_11515001 RAL-802_95b 1126 chr3R 11537502 11537530 chr3R 11537584 11537632 8 94 5.0 4.5 4.8 1.4 130 chr3R 11537502 intron dpr4 - chr3R 11537567 intron dpr4 - chr3R 11537632 intron dpr4 - chr3R_8_11535001 chr3R_11535001 RAL-802_95b 1127 chr3R 11571811 11571847 chr3R 11571926 11571952 6 110 5.5 8.0 6.8 0.8 141 chr3R 11571811 intron Mrp4 + chr3R 11571882 intron Mrp4 + chr3R 11571952 intron Mrp4 + chr3R_6_11570001 chr3R_11570001 RAL-802_95b 1128 chr3R 11694706 11694753 chr3R 11694819 11694850 14 110 3.0 1.0 2.0 4.7 144 chr3R 11694706 intergenic Fer3 - chr3R 11694778 intergenic Fer3 - chr3R 11694850 intergenic not near genes chr3R_14_11690001 chr3R_11690001 RAL-802_95b 1129 chr3R 11740434 11740477 chr3R 11743522 11743570 5 3098 14.0 5.0 9.5 0.5 3136 chr3R 11740434 exon Blm - chr3R 11742002 5` UTR CG14722 + chr3R 11743570 exon CG14722 + chr3R_5_11740001 chr3R_11740001 RAL-802_95b 1130 chr3R 11808078 11808103 chr3R 11808177 11808202 5 97 5.0 6.5 5.8 0.7 124 chr3R 11808078 intron ClC-a - chr3R 11808140 intron ClC-a - chr3R 11808202 intron ClC-a - chr3R_5_11805001 chr3R_11805001 RAL-802_95b 1131 chr3R 11870492 11870501 chr3R 11870592 11870601 4 100 5.5 1.5 3.5 0.9 109 chr3R 11870492 intergenic not near genes chr3R 11870546 intergenic not near genes chr3R 11870601 intergenic not near genes chr3R_4_11870001 chr3R_11870001 RAL-802_95b 1132 chr3R 11874160 11874168 chr3R 11874289 11874298 4 135 2.0 5.0 3.5 0.9 138 chr3R 11874160 intergenic not near genes chr3R 11874229 intergenic not near genes chr3R 11874298 intergenic not near genes chr3R_4_11870001 chr3R_11870001 RAL-802_95b 1133 chr3R 11957846 11957851 chr3R 11958149 11958154 S-element 4 303 3.0 1.5 2.2 1.2 308 chr3R 11957846 intergenic not near genes chr3R 11958000 intergenic not near genes chr3R 11958154 intergenic not near genes chr3R_4_11955001 chr3R_11955001 RAL-802_95b 1134 chr3R 12022872 12022907 chr3R 12025069 12025099 pogo 9 2194 2.0 2.0 2.0 3.0 2227 chr3R 12022872 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025099 intergenic not near genes chr3R_9_12020001 chr3R_12020001 RAL-802_95b 1135 chr3R 12029921 12029947 chr3R 12030028 12030054 4 107 5.0 5.0 5.0 0.7 133 chr3R 12029921 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029988 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030054 exon,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_4_12025001 chr3R_12025001 RAL-802_95b 1136 chr3R 12045166 12045199 chr3R 12045262 12045295 5 96 3.5 4.0 3.8 1.0 129 chr3R 12045166 intergenic not near genes chr3R 12045230 intergenic not near genes chr3R 12045295 intergenic not near genes chr3R_5_12045001 chr3R_12045001 RAL-802_95b 1137 chr3R 12101491 12101531 chr3R 12101576 12101608 8 87 5.5 6.0 5.8 1.2 117 chr3R 12101491 intron dpr17 + chr3R 12101550 intron dpr17 + chr3R 12101608 intron dpr17 + chr3R_8_12100001 chr3R_12100001 RAL-802_95b 1138 chr3R 12219864 12219913 chr3R 12219961 12220010 5 94 7.5 3.0 5.2 0.8 146 chr3R 12219864 intergenic CG4860 -,CG4848 - chr3R 12219937 3` UTR CG4860 - chr3R 12220010 3` UTR CG4860 - chr3R_5_12215001 chr3R_12215001 RAL-802_95b 1139 chr3R 12267847 12267883 chr3R 12267947 12267983 4 100 3.0 4.0 3.5 0.9 136 chr3R 12267847 intron svp + chr3R 12267915 intron svp + chr3R 12267983 intron svp + chr3R_4_12265001 chr3R_12265001 RAL-802_95b 1140 chr3R 12376392 12376419 chr3R 12376497 12376510 8 98 1.5 1.5 1.5 3.2 118 chr3R 12376392 exon GstD5 + chr3R 12376451 3` UTR GstD5 + chr3R 12376510 3` UTR GstD5 + chr3R_8_12375001 chr3R_12375001 RAL-802_95b 1141 chr3R 12445232 12445240 chr3R 12445318 12445341 5 98 7.5 10.5 9.0 0.5 109 chr3R 12445232 intron Desat1 + chr3R 12445286 intron Desat1 + chr3R 12445341 intron Desat1 + chr3R_5_12445001 chr3R_12445001 RAL-802_95b 1142 chr3R 12516049 12516095 chr3R 12516164 12516205 6 109 2.0 4.0 3.0 1.5 156 chr3R 12516049 intron Octbeta3R - chr3R 12516127 intron Octbeta3R - chr3R 12516205 intron Octbeta3R - chr3R_6_12515001 chr3R_12515001 RAL-802_95b 1143 chr3R 12568417 12568469 chr3R 12568513 12568565 6 94 4.5 3.5 4.0 1.2 148 chr3R 12568417 intron Octbeta2R - chr3R 12568491 intron Octbeta2R - chr3R 12568565 intron Octbeta2R - chr3R_6_12565001 chr3R_12565001 RAL-802_95b 1144 chr3R 12610194 12610216 chr3R 12610304 12610326 5 110 9.0 9.5 9.2 0.5 132 chr3R 12610194 intergenic not near genes chr3R 12610260 intergenic not near genes chr3R 12610326 intergenic not near genes chr3R_5_12610001 chr3R_12610001 RAL-802_95b 1145 chr3R 12610219 12610234 chr3R 12610303 12610304 5 90 7.5 9.0 8.2 0.5 85 chr3R 12610219 intergenic not near genes chr3R 12610262 intergenic not near genes chr3R 12610304 intergenic not near genes chr3R_5_12610001 chr3R_12610001 RAL-802_95b 1146 chr3R 12748943 12748985 chr3R 12749056 12749090 5 110 7.0 7.0 7.0 0.6 147 chr3R 12748943 intron beat-Vc - chr3R 12749016 intron beat-Vc - chr3R 12749090 intron beat-Vc - chr3R_5_12745001 chr3R_12745001 RAL-802_95b 1147 chr3R 12763115 12763147 chr3R 12763211 12763244 6 97 0.0 2.0 1.0 3.0 129 chr3R 12763115 intron beat-Vc - chr3R 12763180 intron beat-Vc - chr3R 12763244 intron beat-Vc - chr3R_6_12760001 chr3R_12760001 RAL-802_95b 1148 chr3R 12787930 12787955 chr3R 12788033 12788058 7 103 5.5 7.5 6.5 0.9 128 chr3R 12787930 intergenic not near genes chr3R 12787994 intergenic not near genes chr3R 12788058 intergenic not near genes chr3R_7_12785001 chr3R_12785001 RAL-802_95b 1149 chr3R 12819018 12819039 chr3R 12819115 12819142 8 100 1.5 3.5 2.5 2.3 124 chr3R 12819018 intergenic not near genes chr3R 12819080 intergenic not near genes chr3R 12819142 intergenic not near genes chr3R_8_12815001 chr3R_12815001 RAL-802_95b 1150 chr3R 12858724 12858752 chr3R 12858825 12858853 4 101 8.0 4.0 6.0 0.6 129 chr3R 12858724 intron CG10126 - chr3R 12858788 intron CG10126 - chr3R 12858853 intron CG10126 - chr3R_4_12855001 chr3R_12855001 RAL-802_95b 1151 chr3R 12864556 12864570 chr3R 12865052 12865075 roo 6 511 2.0 2.0 2.0 2.0 519 chr3R 12864556 intergenic not near genes chr3R 12864816 intergenic not near genes chr3R 12865075 intergenic not near genes chr3R_6_12860001 chr3R_12860001 RAL-802_95b 1152 chr3R 12926725 12926749 chr3R 12926856 12926880 5 129 6.0 6.5 6.2 0.7 155 chr3R 12926725 intron beat-Vb + chr3R 12926802 intron beat-Vb + chr3R 12926880 intron beat-Vb + chr3R_5_12925001 chr3R_12925001 RAL-802_95b 1153 chr3R 12943968 12943991 chr3R 12944075 12944093 5 106 7.0 6.0 6.5 0.7 125 chr3R 12943968 intergenic not near genes chr3R 12944030 intergenic not near genes chr3R 12944093 intergenic not near genes chr3R_5_12940001 chr3R_12940001 RAL-802_95b 1154 chr3R 12972537 12972584 chr3R 12972696 12972708 12 156 3.0 2.5 2.8 3.2 171 chr3R 12972537 intron CG7381 - chr3R 12972622 intron CG7381 - chr3R 12972708 intron CG7381 - chr3R_12_12970001 chr3R_12970001 RAL-802_95b 1155 chr3R 13015749 13015775 chr3R 13015836 13015872 5 100 2.5 3.5 3.0 1.2 123 chr3R 13015749 intron CtBP + chr3R 13015810 intron CtBP + chr3R 13015872 intron CtBP + chr3R_5_13015001 chr3R_13015001 RAL-802_95b 1156 chr3R 13042960 13043002 chr3R 13043214 13043222 7 247 7.0 5.0 6.0 1.0 262 chr3R 13042960 exon CG11670 + chr3R 13043091 intron CG11670 + chr3R 13043222 intron CG11670 + chr3R_7_13040001 chr3R_13040001 RAL-802_95b 1157 chr3R 13078688 13078723 chr3R 13078784 13078819 4 99 17.5 21.0 19.2 0.2 131 chr3R 13078688 intergenic not near genes chr3R 13078754 intergenic not near genes chr3R 13078819 intergenic not near genes chr3R_4_13075001 chr3R_13075001 RAL-802_95b 1158 chr3R 13135820 13135850 chr3R 13138005 13138035 pogo 6 2187 3.5 1.5 2.5 1.7 2215 chr3R 13135820 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138035 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_6_13135001 chr3R_13135001 RAL-802_95b 1159 chr3R 13272044 13272076 chr3R 13272149 13272181 6 105 8.0 12.5 10.2 0.5 137 chr3R 13272044 intergenic CG8449 - chr3R 13272112 intergenic CG8449 - chr3R 13272181 intergenic CG8449 - chr3R_6_13270001 chr3R_13270001 RAL-802_95b 1160 chr3R 13325032 13325066 chr3R 13325200 13325234 6 159 3.0 8.0 5.5 0.9 202 chr3R 13325032 intergenic not near genes chr3R 13325133 intergenic not near genes chr3R 13325234 intergenic not near genes chr3R_6_13325001 chr3R_13325001 RAL-802_95b 1161 chr3R 13364636 13364638 chr3R 13364730 13364742 4 102 13.0 11.0 12.0 0.3 106 chr3R 13364636 intron poly - chr3R 13364689 intron poly - chr3R 13364742 intron poly - chr3R_4_13360001 chr3R_13360001 RAL-802_95b 1162 chr3R 13418646 13418681 chr3R 13418742 13418777 7 96 13.0 12.0 12.5 0.5 131 chr3R 13418646 intergenic not near genes chr3R 13418712 intergenic not near genes chr3R 13418777 intergenic not near genes chr3R_7_13415001 chr3R_13415001 RAL-802_95b 1163 chr3R 13435374 13435419 chr3R 13435569 13435614 4 192 7.0 10.5 8.8 0.4 240 chr3R 13435374 intergenic yrt - chr3R 13435494 intergenic not near genes chr3R 13435614 intergenic not near genes chr3R_4_13435001 chr3R_13435001 RAL-802_95b 1164 chr3R 13603038 13603065 chr3R 13603149 13603176 8 109 0.5 3.5 2.0 2.7 138 chr3R 13603038 intergenic not near genes chr3R 13603107 intergenic not near genes chr3R 13603176 intergenic not near genes chr3R_8_13600001 chr3R_13600001 RAL-802_95b 1165 chr3R 13672941 13672973 chr3R 13673039 13673066 5 97 12.5 14.5 13.5 0.3 125 chr3R 13672941 intron Task6 - chr3R 13673004 intron Task6 - chr3R 13673066 intron Task6 - chr3R_5_13670001 chr3R_13670001 RAL-802_95b 1166 chr3R 13714523 13714550 chr3R 13714665 13714709 8 153 9.0 10.5 9.8 0.7 186 chr3R 13714523 intergenic CR34044 - chr3R 13714616 intergenic CR34044 - chr3R 13714709 intergenic CG34383 + chr3R_8_13710001 chr3R_13710001 RAL-802_95b 1167 chr3R 13719967 13719984 chr3R 13720439 13720459 4 476 2.0 4.0 3.0 1.0 492 chr3R 13719967 intron CG34383 + chr3R 13720213 intron CG34383 + chr3R 13720459 intron CG34383 + chr3R_4_13720001 chr3R_13720001 RAL-802_95b 1168 chr3R 13948207 13948241 chr3R 13948320 13948339 4 109 1.5 0.5 1.0 2.0 132 chr3R 13948207 intergenic CG31517 + chr3R 13948273 intergenic CG31517 + chr3R 13948339 intergenic CG31517 + chr3R_4_13945001 chr3R_13945001 RAL-802_95b 1169 chr3R 13981231 13981255 chr3R 13981348 13981350 4 118 4.0 6.5 5.2 0.6 119 chr3R 13981231 intron rdx - chr3R 13981290 intron rdx - chr3R 13981350 intron rdx - chr3R_4_13980001 chr3R_13980001 RAL-802_95b 1170 chr3R 14021620 14021657 chr3R 14023465 14023502 S-element 7 1842 4.5 3.0 3.8 1.5 1882 chr3R 14021620 intron rdx - chr3R 14022561 intron rdx - chr3R 14023502 intron rdx - chr3R_7_14020001 chr3R_14020001 RAL-802_95b 1171 chr3R 14029811 14029860 chr3R 14029919 14029963 4 107 5.0 6.0 5.5 0.6 152 chr3R 14029811 intron,exon rdx -,Cyp6d5 + chr3R 14029887 intron,intron rdx -,Cyp6d5 + chr3R 14029963 intron,intron rdx -,Cyp6d5 + chr3R_4_14025001 chr3R_14025001 RAL-802_95b 1172 chr3R 14058110 14058127 chr3R 14058250 14058261 6 139 9.5 6.0 7.8 0.7 151 chr3R 14058110 intron foxo + chr3R 14058186 intron foxo + chr3R 14058261 intron foxo + chr3R_6_14055001 chr3R_14055001 RAL-802_95b 1173 chr3R 14062149 14062173 chr3R 14062245 14062260 4 94 10.0 6.5 8.2 0.4 111 chr3R 14062149 intron foxo + chr3R 14062204 intron foxo + chr3R 14062260 intron foxo + chr3R_4_14060001 chr3R_14060001 RAL-802_95b 1174 chr3R 14062823 14062868 chr3R 14062917 14062965 5 96 4.5 4.5 4.5 0.9 142 chr3R 14062823 intron foxo + chr3R 14062894 intron foxo + chr3R 14062965 intron foxo + chr3R_5_14060001 chr3R_14060001 RAL-802_95b 1175 chr3R 14083393 14083416 chr3R 14083514 14083537 7 121 7.5 9.0 8.2 0.8 144 chr3R 14083393 intron foxo + chr3R 14083465 intron foxo + chr3R 14083537 intron foxo + chr3R_7_14080001 chr3R_14080001 RAL-802_95b 1176 chr3R 14117426 14117467 chr3R 14117522 14117562 10 94 3.0 5.0 4.0 2.0 136 chr3R 14117426 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117562 intron Kif19A - chr3R_10_14115001 chr3R_14115001 RAL-802_95b 1177 chr3R 14169709 14169767 chr3R 14169821 14169870 9 101 0.0 2.5 1.2 4.1 161 chr3R 14169709 3` UTR Dop1R1 - chr3R 14169790 3` UTR Dop1R1 - chr3R 14169870 3` UTR Dop1R1 - chr3R_9_14165001 chr3R_14165001 RAL-802_95b 1178 chr3R 14180805 14180825 chr3R 14185575 14185580 F-element 4 4774 2.5 0.0 1.2 1.8 4775 chr3R 14180805 intron Dop1R1 - chr3R 14183192 intron Dop1R1 - chr3R 14185580 intron Dop1R1 - chr3R_4_14180001 chr3R_14180001 RAL-802_95b 1179 chr3R 14281066 14281358 chr3R 14281163 14281457 7 95 7.5 12.5 10.0 0.6 391 chr3R 14281066 intron trx - chr3R 14281262 intron trx - chr3R 14281457 intron trx - chr3R_7_14280001 chr3R_14280001 RAL-802_95b 1180 chr3R 14281370 14281404 chr3R 14281458 14281487 10 96 6.0 3.5 4.8 1.7 117 chr3R 14281370 intron trx - chr3R 14281428 intron trx - chr3R 14281487 intron trx - chr3R_10_14280001 chr3R_14280001 RAL-802_95b 1181 chr3R 14401031 14401068 chr3R 14401135 14401172 7 103 10.0 11.0 10.5 0.6 141 chr3R 14401031 intron cv-c - chr3R 14401102 intron cv-c - chr3R 14401172 intron cv-c - chr3R_7_14400001 chr3R_14400001 RAL-802_95b 1182 chr3R 14448879 14448917 chr3R 14448973 14449016 10 91 4.0 4.5 4.2 1.9 137 chr3R 14448879 intron cv-c - chr3R 14448948 intron cv-c - chr3R 14449016 intron cv-c - chr3R_10_14445001 chr3R_14445001 RAL-802_95b 1183 chr3R 14577938 14577977 chr3R 14578074 14578113 8 135 9.0 6.5 7.8 0.9 175 chr3R 14577938 intron stumps + chr3R 14578026 intron stumps + chr3R 14578113 intron stumps + chr3R_8_14575001 chr3R_14575001 RAL-802_95b 1184 chr3R 14612444 14612455 chr3R 14612571 14612595 4 137 2.5 3.0 2.8 1.1 151 chr3R 14612444 intron CG14853 + chr3R 14612520 intron CG14853 + chr3R 14612595 intron CG14853 + chr3R_4_14610001 chr3R_14610001 RAL-802_95b 1185 chr3R 14879028 14879074 chr3R 14879132 14879178 4 104 5.5 4.5 5.0 0.7 150 chr3R 14879028 intergenic CG3631 + chr3R 14879103 intergenic CG3631 + chr3R 14879178 intergenic CG3631 + chr3R_4_14875001 chr3R_14875001 RAL-802_95b 1186 chr3R 15004182 15004215 chr3R 15004284 15004298 6 96 2.5 3.0 2.8 1.6 116 chr3R 15004182 intergenic CR45599 - chr3R 15004240 intergenic CR45599 - chr3R 15004298 3` UTR CR45599 - chr3R_6_15000001 chr3R_15000001 RAL-802_95b 1187 chr3R 15041406 15041452 chr3R 15045200 15045240 Doc 6 3792 3.0 2.5 2.8 1.6 3834 chr3R 15041406 intergenic not near genes chr3R 15043323 intergenic not near genes chr3R 15045240 intergenic not near genes chr3R_6_15040001 chr3R_15040001 RAL-802_95b 1188 chr3R 15079787 15079801 chr3R 15080048 15080052 pogo 4 258 7.5 1.0 4.2 0.8 265 chr3R 15079787 3` UTR CG6966 - chr3R 15079920 3` UTR CG6966 - chr3R 15080052 3` UTR CG6966 - chr3R_4_15075001 chr3R_15075001 RAL-802_95b 1189 chr3R 15102496 15102504 chr3R 15109772 15109780 412 4 7276 3.5 2.5 3.0 1.0 7284 chr3R 15102496 intron CG42788 - chr3R 15106138 intron CG42788 - chr3R 15109780 intron CG42788 - chr3R_4_15105001 chr3R_15105001 RAL-802_95b 1190 chr3R 15115315 15115337 chr3R 15115465 15115500 4 158 8.5 4.0 6.2 0.6 185 chr3R 15115315 intron CG42788 - chr3R 15115408 intron CG42788 - chr3R 15115500 intron CG42788 - chr3R_4_15115001 chr3R_15115001 RAL-802_95b 1191 chr3R 15127762 15127811 chr3R 15127862 15127911 11 99 5.0 8.0 6.5 1.5 149 chr3R 15127762 intron CG42788 - chr3R 15127836 intron CG42788 - chr3R 15127911 intron CG42788 - chr3R_11_15125001 chr3R_15125001 RAL-802_95b 1192 chr3R 15160551 15160592 chr3R 15160669 15160710 10 116 2.0 2.5 2.2 3.1 159 chr3R 15160551 intron Gyc88E + chr3R 15160630 intron Gyc88E + chr3R 15160710 intron Gyc88E + chr3R_10_15160001 chr3R_15160001 RAL-802_95b 1193 chr3R 15162531 15162575 chr3R 15167315 15167362 F-element 8 4786 3.0 1.0 2.0 2.7 4831 chr3R 15162531 intron Gyc88E + chr3R 15164946 intron Gyc88E + chr3R 15167362 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 RAL-802_95b 1194 chr3R 15167788 15167837 chr3R 15167965 15168008 4 164 5.5 3.5 4.5 0.7 220 chr3R 15167788 intron Gyc88E + chr3R 15167898 intron Gyc88E + chr3R 15168008 intron Gyc88E + chr3R_4_15165001 chr3R_15165001 RAL-802_95b 1195 chr3R 15190632 15190681 chr3R 15190777 15190826 16 141 8.0 9.5 8.8 1.6 194 chr3R 15190632 3` UTR Gyc88E + chr3R 15190729 3` UTR Gyc88E + chr3R 15190826 3` UTR Gyc88E + chr3R_16_15190001 chr3R_15190001 RAL-802_95b 1196 chr3R 15257543 15257590 chr3R 15257642 15257669 7 94 5.5 10.0 7.8 0.8 126 chr3R 15257543 3` UTR CG42404 + chr3R 15257606 3` UTR CG42404 + chr3R 15257669 3` UTR CG42404 + chr3R_7_15255001 chr3R_15255001 RAL-802_95b 1197 chr3R 15302514 15302533 chr3R 15302581 15302606 4 81 4.5 6.0 5.2 0.6 92 chr3R 15302514 intron Tm1 + chr3R 15302560 intron Tm1 + chr3R 15302606 intron Tm1 + chr3R_4_15300001 chr3R_15300001 RAL-802_95b 1198 chr3R 15325116 15325166 chr3R 15325231 15325272 5 110 7.0 7.5 7.2 0.6 156 chr3R 15325116 3` UTR ear + chr3R 15325194 3` UTR ear + chr3R 15325272 3` UTR ear + chr3R_5_15325001 chr3R_15325001 RAL-802_95b 1199 chr3R 15406133 15406171 chr3R 15406226 15406272 6 97 7.0 6.5 6.8 0.8 139 chr3R 15406133 intron CG6125 - chr3R 15406202 intron CG6125 - chr3R 15406272 intron CG6125 - chr3R_6_15405001 chr3R_15405001 RAL-802_95b 1200 chr3R 15445897 15445905 chr3R 15446002 15446010 4 105 1.0 1.0 1.0 2.0 113 chr3R 15445897 exon AdamTS-A - chr3R 15445954 intron AdamTS-A - chr3R 15446010 intron AdamTS-A - chr3R_4_15445001 chr3R_15445001 RAL-802_95b 1201 chr3R 15531615 15531665 chr3R 15531808 15531848 4 190 6.0 3.0 4.5 0.7 233 chr3R 15531615 intergenic CG31296 - chr3R 15531732 intergenic CG31296 -,CG18522 - chr3R 15531848 intergenic CG18522 -,CG31296 - chr3R_4_15530001 chr3R_15530001 RAL-802_95b 1202 chr3R 15594654 15594675 chr3R 15594757 15594778 4 99 0.0 5.5 2.8 1.1 124 chr3R 15594654 intergenic not near genes chr3R 15594716 intergenic not near genes chr3R 15594778 intergenic not near genes chr3R_4_15590001 chr3R_15590001 RAL-802_95b 1203 chr3R 15601155 15601180 chr3R 15608697 15608715 412 6 7539 3.5 3.0 3.2 1.4 7560 chr3R 15601155 intergenic not near genes chr3R 15604935 intergenic not near genes chr3R 15608715 intergenic not near genes chr3R_6_15600001 chr3R_15600001 RAL-802_95b 1204 chr3R 15618721 15618764 chr3R 15626211 15626237 blood 5 7481 1.5 1.0 1.2 2.3 7516 chr3R 15618721 intergenic not near genes chr3R 15622479 intergenic not near genes chr3R 15626237 intergenic not near genes chr3R_5_15620001 chr3R_15620001 RAL-802_95b 1205 chr3R 15691176 15691314 chr3R 15691286 15691421 5 110 0.5 1.0 0.8 2.8 245 chr3R 15691176 intergenic not near genes chr3R 15691298 intergenic not near genes chr3R 15691421 intergenic not near genes chr3R_5_15690001 chr3R_15690001 RAL-802_95b 1206 chr3R 15708282 15708317 chr3R 15708370 15708415 6 95 13.5 11.5 12.5 0.4 133 chr3R 15708282 3` UTR CG5404 + chr3R 15708348 3` UTR CG5404 + chr3R 15708415 3` UTR CG5404 + chr3R_6_15705001 chr3R_15705001 RAL-802_95b 1207 chr3R 15758885 15758937 chr3R 15759114 15759115 9 221 5.0 4.5 4.8 1.6 230 chr3R 15758885 intergenic not near genes chr3R 15759000 intergenic not near genes chr3R 15759115 intergenic not near genes chr3R_9_15755001 chr3R_15755001 RAL-802_95b 1208 chr3R 15760783 15760800 chr3R 15760897 15760913 4 114 3.0 5.5 4.2 0.8 130 chr3R 15760783 intergenic not near genes chr3R 15760848 intergenic not near genes chr3R 15760913 intergenic not near genes chr3R_4_15760001 chr3R_15760001 RAL-802_95b 1209 chr3R 15947127 15947150 chr3R 15947219 15947229 5 95 2.5 4.5 3.5 1.1 102 chr3R 15947127 intron Sap47 + chr3R 15947178 intron Sap47 + chr3R 15947229 intron Sap47 + chr3R_5_15945001 chr3R_15945001 RAL-802_95b 1210 chr3R 16033400 16033441 chr3R 16033501 16033537 7 98 7.5 9.0 8.2 0.8 137 chr3R 16033400 intron pnr + chr3R 16033468 intron pnr + chr3R 16033537 intron pnr + chr3R_7_16030001 chr3R_16030001 RAL-802_95b 1211 chr3R 16073440 16073453 chr3R 16073554 16073577 4 122 3.5 3.0 3.2 1.0 137 chr3R 16073440 intron Mhcl - chr3R 16073508 intron Mhcl - chr3R 16073577 intron Mhcl - chr3R_4_16070001 chr3R_16070001 RAL-802_95b 1212 chr3R 16189394 16189440 chr3R 16189817 16189848 invader4 11 419 2.5 5.0 3.8 2.3 454 chr3R 16189394 intron sra + chr3R 16189621 intron sra + chr3R 16189848 intron sra + chr3R_11_16185001 chr3R_16185001 RAL-802_95b 1213 chr3R 16210826 16210843 chr3R 16210932 16210949 6 106 8.0 10.0 9.0 0.6 123 chr3R 16210826 intergenic not near genes chr3R 16210888 intergenic not near genes chr3R 16210949 intergenic not near genes chr3R_6_16210001 chr3R_16210001 RAL-802_95b 1214 chr3R 16225067 16225116 chr3R 16225172 16225221 14 104 3.0 1.5 2.2 4.4 154 chr3R 16225067 intergenic not near genes chr3R 16225144 intergenic not near genes chr3R 16225221 intergenic tara + chr3R_14_16225001 chr3R_16225001 RAL-802_95b 1215 chr3R 16298873 16298898 chr3R 16298978 16299002 4 105 10.5 8.5 9.5 0.4 129 chr3R 16298873 intron gish + chr3R 16298938 intron gish + chr3R 16299002 intron gish + chr3R_4_16295001 chr3R_16295001 RAL-802_95b 1216 chr3R 16374292 16374305 chr3R 16374424 16374442 5 136 2.5 9.0 5.8 0.7 150 chr3R 16374292 intergenic ss - chr3R 16374367 intergenic ss - chr3R 16374442 3` UTR ss - chr3R_5_16370001 chr3R_16370001 RAL-802_95b 1217 chr3R 16620368 16620399 chr3R 16620528 16620559 5 160 0.5 1.0 0.8 2.8 191 chr3R 16620368 intergenic CG14893 +,CG17560 + chr3R 16620464 intergenic CG14893 + chr3R 16620559 intergenic CG14893 + chr3R_5_16620001 chr3R_16620001 RAL-802_95b 1218 chr3R 16734864 16734895 chr3R 16734967 16734990 4 101 4.5 9.0 6.8 0.5 126 chr3R 16734864 intergenic Ubx - chr3R 16734927 intergenic not near genes chr3R 16734990 intergenic not near genes chr3R_4_16730001 chr3R_16730001 RAL-802_95b 1219 chr3R 16755736 16755767 chr3R 16755815 16755863 5 91 1.5 4.0 2.8 1.3 127 chr3R 16755736 intron bxd - chr3R 16755800 intron bxd - chr3R 16755863 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-802_95b 1220 chr3R 16860332 16860365 chr3R 16860424 16860453 5 86 0.5 0.5 0.5 3.3 121 chr3R 16860332 intron iab-8 - chr3R 16860392 intron iab-8 - chr3R 16860453 intron iab-8 - chr3R_5_16860001 chr3R_16860001 RAL-802_95b 1221 chr3R 16936938 16936948 chr3R 16937054 16937058 5 113 6.5 2.5 4.5 0.9 120 chr3R 16936938 intron Abd-B - chr3R 16936998 intron Abd-B - chr3R 16937058 intron Abd-B - chr3R_5_16935001 chr3R_16935001 RAL-802_95b 1222 chr3R 17015020 17015068 chr3R 17015158 17015201 8 135 7.5 4.0 5.8 1.2 181 chr3R 17015020 intron Pxd + chr3R 17015110 intron Pxd + chr3R 17015201 intron Pxd + chr3R_8_17015001 chr3R_17015001 RAL-802_95b 1223 chr3R 17082082 17082124 chr3R 17082180 17082223 7 94 7.5 9.5 8.5 0.7 141 chr3R 17082082 intron kuk + chr3R 17082152 intron kuk + chr3R 17082223 intron kuk + chr3R_7_17080001 chr3R_17080001 RAL-802_95b 1224 chr3R 17184720 17184743 chr3R 17184816 17184839 4 96 7.0 6.5 6.8 0.5 119 chr3R 17184720 intron Mur89F - chr3R 17184780 intron Mur89F - chr3R 17184839 intron Mur89F - chr3R_4_17180001 chr3R_17180001 RAL-802_95b 1225 chr3R 17268663 17268696 chr3R 17268805 17268838 7 138 7.0 5.5 6.2 1.0 175 chr3R 17268663 intergenic not near genes chr3R 17268750 intergenic not near genes chr3R 17268838 intergenic not near genes chr3R_7_17265001 chr3R_17265001 RAL-802_95b 1226 chr3R 17294653 17294688 chr3R 17295101 17295135 BS 4 445 0.5 2.0 1.2 1.8 482 chr3R 17294653 intergenic not near genes chr3R 17294894 intergenic not near genes chr3R 17295135 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-802_95b 1227 chr3R 17346675 17346716 chr3R 17348258 17348299 F-element 10 1582 2.5 1.5 2.0 3.3 1624 chr3R 17346675 intron beat-IIa - chr3R 17347487 intron beat-IIa - chr3R 17348299 intron beat-IIa - chr3R_10_17345001 chr3R_17345001 RAL-802_95b 1228 chr3R 17519717 17519772 chr3R 17519832 17519883 8 108 0.5 2.5 1.5 3.2 166 chr3R 17519717 intergenic not near genes chr3R 17519800 intergenic not near genes chr3R 17519883 intergenic not near genes chr3R_8_17515001 chr3R_17515001 RAL-802_95b 1229 chr3R 17702551 17702584 chr3R 17702675 17702719 11 134 3.0 8.0 5.5 1.7 168 chr3R 17702551 intron osa - chr3R 17702635 intron osa - chr3R 17702719 intron osa - chr3R_11_17700001 chr3R_17700001 RAL-802_95b 1230 chr3R 17728706 17728898 chr3R 17728809 17728974 5 104 3.0 4.5 3.8 1.0 268 chr3R 17728706 exon Lgr1 + chr3R 17728840 intron Lgr1 + chr3R 17728974 intron Lgr1 + chr3R_5_17725001 chr3R_17725001 RAL-802_95b 1231 chr3R 17734826 17734854 chr3R 17734959 17734987 6 130 4.0 1.0 2.5 1.7 161 chr3R 17734826 intergenic CG14321 + chr3R 17734906 intergenic not near genes chr3R 17734987 intergenic not near genes chr3R_6_17730001 chr3R_17730001 RAL-802_95b 1232 chr3R 17823186 17823221 chr3R 17823283 17823313 4 95 11.0 7.5 9.2 0.4 127 chr3R 17823186 intron tinc + chr3R 17823250 intron tinc + chr3R 17823313 intron tinc + chr3R_4_17820001 chr3R_17820001 RAL-802_95b 1233 chr3R 17895336 17895374 chr3R 17895435 17895485 5 107 5.5 2.5 4.0 1.0 149 chr3R 17895336 intron Rim - chr3R 17895410 intron Rim - chr3R 17895485 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-802_95b 1234 chr3R 17912809 17912843 chr3R 17912910 17912944 4 101 6.5 3.0 4.8 0.7 135 chr3R 17912809 intron Rim - chr3R 17912876 intron Rim - chr3R 17912944 intron Rim - chr3R_4_17910001 chr3R_17910001 RAL-802_95b 1235 chr3R 18061437 18061447 chr3R 18061539 18061559 4 106 11.0 15.0 13.0 0.3 122 chr3R 18061437 intergenic not near genes chr3R 18061498 intergenic not near genes chr3R 18061559 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-802_95b 1236 chr3R 18061570 18061610 chr3R 18063158 18063198 F-element 11 1588 5.0 2.5 3.8 2.3 1628 chr3R 18061570 intergenic not near genes chr3R 18062384 intergenic not near genes chr3R 18063198 intergenic not near genes chr3R_11_18060001 chr3R_18060001 RAL-802_95b 1237 chr3R 18107121 18107133 chr3R 18107224 18107235 5 103 6.0 5.5 5.8 0.7 114 chr3R 18107121 intron sr + chr3R 18107178 intron sr + chr3R 18107235 intron sr + chr3R_5_18105001 chr3R_18105001 RAL-802_95b 1238 chr3R 18112351 18112363 chr3R 18112454 18112466 4 103 2.5 2.0 2.2 1.2 115 chr3R 18112351 intron sr + chr3R 18112408 intron sr + chr3R 18112466 intron sr + chr3R_4_18110001 chr3R_18110001 RAL-802_95b 1239 chr3R 18122874 18122916 chr3R 18122971 18123013 10 94 3.5 1.0 2.2 3.1 139 chr3R 18122874 intron sr + chr3R 18122944 intron sr + chr3R 18123013 intron sr + chr3R_10_18120001 chr3R_18120001 RAL-802_95b 1240 chr3R 18235392 18235430 chr3R 18235494 18235532 9 101 14.0 14.5 14.2 0.6 140 chr3R 18235392 intergenic not near genes chr3R 18235462 intergenic not near genes chr3R 18235532 intergenic not near genes chr3R_9_18235001 chr3R_18235001 RAL-802_95b 1241 chr3R 18352572 18352580 chr3R 18352674 18352683 5 107 5.5 6.0 5.8 0.7 111 chr3R 18352572 intron CG15803 - chr3R 18352628 intron CG15803 - chr3R 18352683 intron CG15803 - chr3R_5_18350001 chr3R_18350001 RAL-802_95b 1242 chr3R 18394453 18394488 chr3R 18394550 18394585 7 93 3.0 1.0 2.0 2.3 132 chr3R 18394453 intron Vha100-2 - chr3R 18394519 intron Vha100-2 - chr3R 18394585 intron Vha100-2 - chr3R_7_18390001 chr3R_18390001 RAL-802_95b 1243 chr3R 18617692 18617784 chr3R 18617792 18617883 4 100 2.0 1.0 1.5 1.6 191 chr3R 18617692 intron,intron qin +,CG14304 - chr3R 18617788 intron,intron qin +,CG14304 - chr3R 18617883 intron,intron qin +,CG14304 - chr3R_4_18615001 chr3R_18615001 RAL-802_95b 1244 chr3R 18618250 18618297 chr3R 18618355 18618402 5 105 8.5 8.5 8.5 0.5 152 chr3R 18618250 intron,intron qin +,CG14304 - chr3R 18618326 intron,intron qin +,CG14304 - chr3R 18618402 intron,intron qin +,CG14304 - chr3R_5_18615001 chr3R_18615001 RAL-802_95b 1245 chr3R 18830043 18830087 chr3R 18830201 18830245 6 155 9.5 3.5 6.5 0.8 202 chr3R 18830043 intron CG18208 - chr3R 18830144 intron CG18208 - chr3R 18830245 intron CG18208 - chr3R_6_18830001 chr3R_18830001 RAL-802_95b 1246 chr3R 18939891 18939931 chr3R 18939996 18940041 4 101 4.0 2.0 3.0 1.0 150 chr3R 18939891 intron CG42613 + chr3R 18939966 intron CG42613 + chr3R 18940041 intron CG42613 + chr3R_4_18935001 chr3R_18935001 RAL-802_95b 1247 chr3R 19014088 19014115 chr3R 19014172 19014190 4 81 4.5 3.5 4.0 0.8 102 chr3R 19014088 intron gukh + chr3R 19014139 intron gukh + chr3R 19014190 intron gukh + chr3R_4_19010001 chr3R_19010001 RAL-802_95b 1248 chr3R 19122913 19122928 chr3R 19123009 19123024 4 93 0.0 0.0 0.0 4.0 111 chr3R 19122913 intron CG6040 + chr3R 19122968 intron CG6040 + chr3R 19123024 intron CG6040 + chr3R_4_19120001 chr3R_19120001 RAL-802_95b 1249 chr3R 19226706 19226719 chr3R 19230857 19230905 5 4158 6.0 11.0 8.5 0.5 4199 chr3R 19226706 intergenic vib -,CG11703 - chr3R 19228806 exon CG5250 - chr3R 19230905 exon unc79 - chr3R_5_19225001 chr3R_19225001 RAL-802_95b 1250 chr3R 19294696 19294713 chr3R 19294915 19294916 6 217 6.0 2.5 4.2 1.2 220 chr3R 19294696 intergenic not near genes chr3R 19294806 intergenic not near genes chr3R 19294916 intergenic not near genes chr3R_6_19290001 chr3R_19290001 RAL-802_95b 1251 chr3R 19340385 19340414 chr3R 19340472 19340511 6 95 2.5 4.5 3.5 1.3 126 chr3R 19340385 intergenic not near genes chr3R 19340448 intergenic not near genes chr3R 19340511 intergenic not near genes chr3R_6_19340001 chr3R_19340001 RAL-802_95b 1252 chr3R 19344660 19344697 chr3R 19344815 19344852 6 155 4.0 2.0 3.0 1.5 192 chr3R 19344660 intergenic not near genes chr3R 19344756 intergenic not near genes chr3R 19344852 intergenic not near genes chr3R_6_19340001 chr3R_19340001 RAL-802_95b 1253 chr3R 19474850 19474893 chr3R 19475005 19475048 7 154 4.5 2.0 3.2 1.7 198 chr3R 19474850 intron Dys + chr3R 19474949 intron Dys + chr3R 19475048 intron Dys + chr3R_7_19470001 chr3R_19470001 RAL-802_95b 1254 chr3R 19514229 19514251 chr3R 19514368 19514390 6 138 4.5 5.0 4.8 1.0 161 chr3R 19514229 intron Dys + chr3R 19514310 intron Dys + chr3R 19514390 intron Dys + chr3R_6_19510001 chr3R_19510001 RAL-802_95b 1255 chr3R 19564980 19564999 chr3R 19565079 19565098 6 99 6.5 8.0 7.2 0.7 118 chr3R 19564980 intron Dys + chr3R 19565039 intron Dys + chr3R 19565098 intron Dys + chr3R_6_19565001 chr3R_19565001 RAL-802_95b 1256 chr3R 19675326 19675366 chr3R 19675486 19675536 8 159 3.5 10.5 7.0 1.0 210 chr3R 19675326 intron Naam + chr3R 19675431 intron Naam + chr3R 19675536 intron Naam + chr3R_8_19675001 chr3R_19675001 RAL-802_95b 1257 chr3R 19702325 19702335 chr3R 19702411 19702411 4 84 7.0 4.5 5.8 0.6 86 chr3R 19702325 intergenic not near genes chr3R 19702368 intergenic not near genes chr3R 19702411 intergenic not near genes chr3R_4_19700001 chr3R_19700001 RAL-802_95b 1258 chr3R 19756573 19756601 chr3R 19756665 19756711 9 102 7.5 11.5 9.5 0.9 138 chr3R 19756573 intron GluClalpha + chr3R 19756642 intron GluClalpha + chr3R 19756711 intron GluClalpha + chr3R_9_19755001 chr3R_19755001 RAL-802_95b 1259 chr3R 19859520 19859560 chr3R 19859616 19859624 11 92 10.5 9.5 10.0 1.0 104 chr3R 19859520 intron Ire1 - chr3R 19859572 intron Ire1 - chr3R 19859624 intron Ire1 - chr3R_11_19855001 chr3R_19855001 RAL-802_95b 1260 chr3R 19913990 19914040 chr3R 19914103 19914150 6 107 11.5 13.5 12.5 0.4 160 chr3R 19913990 3` UTR RhoGAP92B + chr3R 19914070 3` UTR RhoGAP92B + chr3R 19914150 3` UTR RhoGAP92B + chr3R_6_19910001 chr3R_19910001 RAL-802_95b 1261 chr3R 20007194 20007224 chr3R 20007300 20007310 6 100 4.5 5.0 4.8 1.0 116 chr3R 20007194 intron Hs6st - chr3R 20007252 intron Hs6st - chr3R 20007310 intron Hs6st - chr3R_6_20005001 chr3R_20005001 RAL-802_95b 1262 chr3R 20066532 20066584 chr3R 20066788 20066835 7 251 2.5 6.5 4.5 1.3 303 chr3R 20066532 intergenic not near genes chr3R 20066684 intergenic not near genes chr3R 20066835 intergenic not near genes chr3R_7_20065001 chr3R_20065001 RAL-802_95b 1263 chr3R 20079106 20079140 chr3R 20079223 20079227 4 112 2.5 1.0 1.8 1.4 121 chr3R 20079106 intergenic not near genes chr3R 20079166 intergenic not near genes chr3R 20079227 intergenic not near genes chr3R_4_20075001 chr3R_20075001 RAL-802_95b 1264 chr3R 20097694 20097713 chr3R 20097792 20097811 8 98 11.5 7.0 9.2 0.8 117 chr3R 20097694 intergenic not near genes chr3R 20097752 intergenic not near genes chr3R 20097811 intergenic not near genes chr3R_8_20095001 chr3R_20095001 RAL-802_95b 1265 chr3R 20109530 20109567 chr3R 20114756 20114768 copia 5 5220 2.0 4.5 3.2 1.2 5238 chr3R 20109530 intergenic not near genes chr3R 20112149 intergenic not near genes chr3R 20114768 intergenic CG10887 + chr3R_5_20110001 chr3R_20110001 RAL-802_95b 1266 chr3R 20156681 20156714 chr3R 20165863 20165904 roo 7 9187 2.5 2.0 2.2 2.2 9223 chr3R 20156681 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165904 intergenic not near genes chr3R_7_20160001 chr3R_20160001 RAL-802_95b 1267 chr3R 20180692 20180721 chr3R 20180797 20180809 7 100 5.0 3.5 4.2 1.3 117 chr3R 20180692 intergenic not near genes chr3R 20180750 intergenic not near genes chr3R 20180809 intergenic not near genes chr3R_7_20180001 chr3R_20180001 RAL-802_95b 1268 chr3R 20197094 20197150 chr3R 20197191 20197238 8 88 3.5 4.0 3.8 1.7 144 chr3R 20197094 intergenic not near genes chr3R 20197166 intergenic not near genes chr3R 20197238 intergenic not near genes chr3R_8_20195001 chr3R_20195001 RAL-802_95b 1269 chr3R 20205554 20205595 chr3R 20205696 20205737 7 141 1.5 4.0 2.8 1.8 183 chr3R 20205554 intron Nlg4 + chr3R 20205646 intron Nlg4 + chr3R 20205737 intron Nlg4 + chr3R_7_20205001 chr3R_20205001 RAL-802_95b 1270 chr3R 20209795 20209833 chr3R 20209901 20209939 5 106 10.5 12.5 11.5 0.4 144 chr3R 20209795 intron Nlg4 + chr3R 20209867 intron Nlg4 + chr3R 20209939 intron Nlg4 + chr3R_5_20205001 chr3R_20205001 RAL-802_95b 1271 chr3R 20266500 20266549 chr3R 20272987 20273019 Burdock 8 6487 1.0 4.0 2.5 2.3 6519 chr3R 20266500 intron cic + chr3R 20269760 intron cic + chr3R 20273019 intron cic + chr3R_8_20265001 chr3R_20265001 RAL-802_95b 1272 chr3R 20282286 20282300 chr3R 20282352 20282396 8 90 0.0 0.5 0.2 6.7 110 chr3R 20282286 intron cic + chr3R 20282341 intron cic + chr3R 20282396 intron cic + chr3R_8_20280001 chr3R_20280001 RAL-802_95b 1273 chr3R 20312845 20312883 chr3R 20312951 20312989 7 105 11.5 10.5 11.0 0.6 144 chr3R 20312845 intron CG42668 + chr3R 20312917 intron CG42668 + chr3R 20312989 intron CG42668 + chr3R_7_20310001 chr3R_20310001 RAL-802_95b 1274 chr3R 20330983 20331032 chr3R 20331489 20331498 roo 11 499 3.0 5.5 4.2 2.1 515 chr3R 20330983 intergenic Sirt2 + chr3R 20331240 intergenic Sirt2 + chr3R 20331498 intergenic not near genes chr3R_11_20330001 chr3R_20330001 RAL-802_95b 1275 chr3R 20469459 20469472 chr3R 20469562 20469575 5 101 4.5 4.5 4.5 0.9 116 chr3R 20469459 intron Gfrl - chr3R 20469517 intron Gfrl - chr3R 20469575 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-802_95b 1276 chr3R 20512974 20512979 chr3R 20515706 20515711 opus 4 2732 9.0 0.5 4.8 0.7 2737 chr3R 20512974 intergenic not near genes chr3R 20514342 intergenic not near genes chr3R 20515711 intergenic not near genes chr3R_4_20510001 chr3R_20510001 RAL-802_95b 1277 chr3R 20512983 20513001 chr3R 20515705 20515733 opus 5 2730 4.5 0.5 2.5 1.4 2750 chr3R 20512983 intergenic not near genes chr3R 20514358 intergenic not near genes chr3R 20515733 intergenic not near genes chr3R_5_20510001 chr3R_20510001 RAL-802_95b 1278 chr3R 20663689 20663734 chr3R 20663813 20663847 8 107 3.5 4.0 3.8 1.7 158 chr3R 20663689 intergenic not near genes chr3R 20663768 intergenic not near genes chr3R 20663847 intergenic not near genes chr3R_8_20660001 chr3R_20660001 RAL-802_95b 1279 chr3R 20684198 20684226 chr3R 20684302 20684330 6 102 11.0 11.5 11.2 0.5 132 chr3R 20684198 intergenic not near genes chr3R 20684264 intergenic not near genes chr3R 20684330 intergenic not near genes chr3R_6_20680001 chr3R_20680001 RAL-802_95b 1280 chr3R 20707736 20707768 chr3R 20707961 20708001 6 228 1.0 6.5 3.8 1.2 265 chr3R 20707736 intron Oamb - chr3R 20707868 intron Oamb - chr3R 20708001 intron Oamb - chr3R_6_20705001 chr3R_20705001 RAL-802_95b 1281 chr3R 20732391 20732429 chr3R 20732483 20732535 4 103 2.0 1.5 1.8 1.4 144 chr3R 20732391 exon CG31205 + chr3R 20732463 exon CG31205 + chr3R 20732535 exon CG31205 + chr3R_4_20730001 chr3R_20730001 RAL-802_95b 1282 chr3R 20739573 20739602 chr3R 20739711 20739740 5 138 11.0 11.5 11.2 0.4 167 chr3R 20739573 intergenic CG17267 - chr3R 20739656 intergenic CG42322 + chr3R 20739740 intergenic CG42322 + chr3R_5_20735001 chr3R_20735001 RAL-802_95b 1283 chr3R 20870230 20870277 chr3R 20870335 20870366 10 99 1.0 1.5 1.2 4.5 136 chr3R 20870230 intergenic not near genes chr3R 20870298 intergenic not near genes chr3R 20870366 intergenic not near genes chr3R_10_20870001 chr3R_20870001 RAL-802_95b 1284 chr3R 20899897 20899939 chr3R 20900013 20900055 7 113 9.5 12.5 11.0 0.6 158 chr3R 20899897 intergenic not near genes chr3R 20899976 intergenic not near genes chr3R 20900055 intergenic not near genes chr3R_7_20895001 chr3R_20895001 RAL-802_95b 1285 chr3R 21020382 21020429 chr3R 21020478 21020525 6 90 10.5 9.0 9.8 0.6 143 chr3R 21020382 3` UTR Rlip + chr3R 21020454 3` UTR Rlip + chr3R 21020525 3` UTR Rlip + chr3R_6_21020001 chr3R_21020001 RAL-802_95b 1286 chr3R 21108020 21108062 chr3R 21108300 21108307 6 275 1.0 1.0 1.0 3.0 287 chr3R 21108020 intergenic Sec15 -,rtet + chr3R 21108164 intergenic Sec15 -,rtet + chr3R 21108307 intergenic rtet +,Sec15 - chr3R_6_21105001 chr3R_21105001 RAL-802_95b 1287 chr3R 21132611 21132649 chr3R 21132714 21132752 4 103 6.0 5.5 5.8 0.6 141 chr3R 21132611 3` UTR Ice2 + chr3R 21132682 3` UTR Ice2 + chr3R 21132752 3` UTR CG7009 - chr3R_4_21130001 chr3R_21130001 RAL-802_95b 1288 chr3R 21240443 21240478 chr3R 21240549 21240582 12 106 0.5 2.0 1.2 5.5 139 chr3R 21240443 intergenic not near genes chr3R 21240512 intergenic not near genes chr3R 21240582 intergenic not near genes chr3R_12_21240001 chr3R_21240001 RAL-802_95b 1289 chr3R 21518010 21518264 chr3R 21518158 21518336 4 118 0.0 0.0 0.0 4.0 326 chr3R 21518010 intergenic not near genes chr3R 21518173 intergenic not near genes chr3R 21518336 intergenic not near genes chr3R_4_21515001 chr3R_21515001 RAL-802_95b 1290 chr3R 21519976 21520137 chr3R 21520087 21520236 14 111 1.5 1.0 1.2 6.4 260 chr3R 21519976 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520236 intergenic not near genes chr3R_14_21520001 chr3R_21520001 RAL-802_95b 1291 chr3R 21586408 21586453 chr3R 21586511 21586512 6 95 3.0 3.0 3.0 1.5 104 chr3R 21586408 intron InR - chr3R 21586460 intron InR - chr3R 21586512 intron InR - chr3R_6_21585001 chr3R_21585001 RAL-802_95b 1292 chr3R 21592798 21592841 chr3R 21592899 21592942 7 101 7.0 6.0 6.5 0.9 144 chr3R 21592798 intron,intron InR -,CR43653 + chr3R 21592870 intron,intron InR -,CR43653 + chr3R 21592942 intron,intron InR -,CR43653 + chr3R_7_21590001 chr3R_21590001 RAL-802_95b 1293 chr3R 21634219 21634249 chr3R 21634320 21634350 7 99 9.0 11.5 10.2 0.6 131 chr3R 21634219 intron E2f - chr3R 21634284 intron E2f - chr3R 21634350 intron E2f - chr3R_7_21630001 chr3R_21630001 RAL-802_95b 1294 chr3R 21651219 21651268 chr3R 21651317 21651366 4 98 15.5 14.0 14.8 0.3 147 chr3R 21651219 intron E2f - chr3R 21651292 intron E2f - chr3R 21651366 intron E2f - chr3R_4_21650001 chr3R_21650001 RAL-802_95b 1295 chr3R 21655240 21655249 chr3R 21655368 21655377 4 129 2.0 5.5 3.8 0.8 137 chr3R 21655240 intron E2f - chr3R 21655308 intron E2f - chr3R 21655377 intron E2f - chr3R_4_21655001 chr3R_21655001 RAL-802_95b 1296 chr3R 21725665 21725683 chr3R 21725810 21725839 4 153 4.5 3.5 4.0 0.8 174 chr3R 21725665 intergenic not near genes chr3R 21725752 intergenic not near genes chr3R 21725839 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-802_95b 1297 chr3R 21731780 21731834 chr3R 21731908 21731960 4 120 0.5 0.0 0.2 3.3 180 chr3R 21731780 intergenic not near genes chr3R 21731870 intergenic not near genes chr3R 21731960 intergenic not near genes chr3R_4_21730001 chr3R_21730001 RAL-802_95b 1298 chr3R 21800493 21800505 chr3R 21800598 21800598 4 102 10.0 4.5 7.2 0.5 105 chr3R 21800493 intron CASK - chr3R 21800546 intron CASK - chr3R 21800598 intron CASK - chr3R_4_21800001 chr3R_21800001 RAL-802_95b 1299 chr3R 21921822 21921858 chr3R 21921936 21921972 6 112 1.0 0.5 0.8 3.3 150 chr3R 21921822 intergenic not near genes chr3R 21921897 intergenic not near genes chr3R 21921972 intergenic not near genes chr3R_6_21920001 chr3R_21920001 RAL-802_95b 1300 chr3R 21928958 21929002 chr3R 21929059 21929093 6 106 4.0 4.0 4.0 1.2 135 chr3R 21928958 intergenic not near genes chr3R 21929026 intergenic not near genes chr3R 21929093 intergenic not near genes chr3R_6_21925001 chr3R_21925001 RAL-802_95b 1301 chr3R 22089984 22090014 chr3R 22090098 22090129 4 105 4.5 8.0 6.2 0.6 145 chr3R 22089984 intron CG5778 - chr3R 22090056 intron CG5778 - chr3R 22090129 intron CG5778 - chr3R_4_22090001 chr3R_22090001 RAL-802_95b 1302 chr3R 22115413 22115428 chr3R 22116514 22116529 4 1101 18.0 21.0 19.5 0.2 1116 chr3R 22115413 intergenic Ir94b -,Ir94a + chr3R 22115971 exon Ir94b - chr3R 22116529 exon Ir94b - chr3R_4_22115001 chr3R_22115001 RAL-802_95b 1303 chr3R 22234672 22234712 chr3R 22236011 22236017 pogo 8 1334 1.5 1.0 1.2 3.6 1345 chr3R 22234672 intron SKIP + chr3R 22235344 intron SKIP + chr3R 22236017 intron SKIP + chr3R_8_22235001 chr3R_22235001 RAL-802_95b 1304 chr3R 22321642 22321692 chr3R 22321739 22321789 9 94 3.5 2.0 2.8 2.4 147 chr3R 22321642 intron CG34377 - chr3R 22321716 intron CG34377 - chr3R 22321789 intron CG34377 - chr3R_9_22320001 chr3R_22320001 RAL-802_95b 1305 chr3R 22526280 22526322 chr3R 22526381 22526423 4 97 9.5 7.5 8.5 0.4 143 chr3R 22526280 intron CG5346 - chr3R 22526352 intron CG5346 - chr3R 22526423 intron CG5346 - chr3R_4_22525001 chr3R_22525001 RAL-802_95b 1306 chr3R 22591646 22591691 chr3R 22591746 22591791 11 98 9.5 4.5 7.0 1.4 145 chr3R 22591646 intron Efa6 + chr3R 22591718 intron Efa6 + chr3R 22591791 intron Efa6 + chr3R_11_22590001 chr3R_22590001 RAL-802_95b 1307 chr3R 22595164 22595203 chr3R 22595272 22595301 4 106 4.5 5.5 5.0 0.7 137 chr3R 22595164 intron Efa6 + chr3R 22595232 intron Efa6 + chr3R 22595301 intron Efa6 + chr3R_4_22595001 chr3R_22595001 RAL-802_95b 1308 chr3R 22648308 22648355 chr3R 22648407 22648454 4 95 5.5 4.0 4.8 0.7 146 chr3R 22648308 intron wake + chr3R 22648381 intron wake + chr3R 22648454 intron wake + chr3R_4_22645001 chr3R_22645001 RAL-802_95b 1309 chr3R 22794504 22794547 chr3R 22794600 22794642 5 92 1.0 1.0 1.0 2.5 138 chr3R 22794504 intergenic CG7029 + chr3R 22794573 intergenic not near genes chr3R 22794642 intergenic not near genes chr3R_5_22790001 chr3R_22790001 RAL-802_95b 1310 chr3R 22797760 22797935 chr3R 22797866 22798045 8 107 9.0 8.5 8.8 0.8 285 chr3R 22797760 intergenic not near genes chr3R 22797902 intergenic not near genes chr3R 22798045 intergenic not near genes chr3R_8_22795001 chr3R_22795001 RAL-802_95b 1311 chr3R 22880935 22880957 chr3R 22881093 22881115 4 158 8.0 3.5 5.8 0.6 180 chr3R 22880935 intergenic not near genes chr3R 22881025 intergenic not near genes chr3R 22881115 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-802_95b 1312 chr3R 22881190 22881221 chr3R 22884916 22884946 Doc 4 3726 1.0 2.5 1.8 1.4 3756 chr3R 22881190 intergenic not near genes chr3R 22883068 intergenic not near genes chr3R 22884946 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-802_95b 1313 chr3R 23088972 23088979 chr3R 23089069 23089076 4 97 10.5 6.5 8.5 0.4 104 chr3R 23088972 intron CG13830 - chr3R 23089024 intron CG13830 - chr3R 23089076 intron CG13830 - chr3R_4_23085001 chr3R_23085001 RAL-802_95b 1314 chr3R 23169010 23169060 chr3R 23169117 23169167 6 103 7.5 11.0 9.2 0.6 157 chr3R 23169010 intron Irk1 + chr3R 23169088 intron Irk1 + chr3R 23169167 intron Irk1 + chr3R_6_23165001 chr3R_23165001 RAL-802_95b 1315 chr3R 23170481 23170519 chr3R 23170584 23170622 5 100 0.5 3.5 2.0 1.7 141 chr3R 23170481 intron Irk1 + chr3R 23170552 intron Irk1 + chr3R 23170622 intron Irk1 + chr3R_5_23170001 chr3R_23170001 RAL-802_95b 1316 chr3R 23172494 23172535 chr3R 23172624 23172655 6 128 7.5 8.5 8.0 0.7 161 chr3R 23172494 intron Irk1 + chr3R 23172574 intron Irk1 + chr3R 23172655 intron Irk1 + chr3R_6_23170001 chr3R_23170001 RAL-802_95b 1317 chr3R 23225036 23225048 chr3R 23225132 23225144 4 93 10.5 9.5 10.0 0.4 108 chr3R 23225036 intron cnc - chr3R 23225090 intron cnc - chr3R 23225144 intron cnc - chr3R_4_23225001 chr3R_23225001 RAL-802_95b 1318 chr3R 23234402 23234436 chr3R 23234498 23234531 8 97 6.0 7.5 6.8 1.0 129 chr3R 23234402 intron CG4467 - chr3R 23234466 intron CG4467 - chr3R 23234531 intron CG4467 - chr3R_8_23230001 chr3R_23230001 RAL-802_95b 1319 chr3R 23318388 23318397 chr3R 23318502 23318523 4 121 9.5 14.5 12.0 0.3 135 chr3R 23318388 intron pnt - chr3R 23318456 intron pnt - chr3R 23318523 intron pnt - chr3R_4_23315001 chr3R_23315001 RAL-802_95b 1320 chr3R 23324010 23324057 chr3R 23324116 23324163 8 104 5.5 8.5 7.0 1.0 153 chr3R 23324010 intron pnt - chr3R 23324086 intron pnt - chr3R 23324163 intron pnt - chr3R_8_23320001 chr3R_23320001 RAL-802_95b 1321 chr3R 23332920 23332969 chr3R 23333030 23333061 4 98 5.0 6.5 5.8 0.6 141 chr3R 23332920 intron pnt - chr3R 23332990 intron pnt - chr3R 23333061 intron pnt - chr3R_4_23330001 chr3R_23330001 RAL-802_95b 1322 chr3R 23459178 23459216 chr3R 23459516 23459554 5 334 5.0 5.5 5.2 0.8 376 chr3R 23459178 intron CG4374 - chr3R 23459366 intron CG4374 - chr3R 23459554 intron CG4374 - chr3R_5_23455001 chr3R_23455001 RAL-802_95b 1323 chr3R 23564430 23564475 chr3R 23564594 23564639 4 164 6.5 6.5 6.5 0.5 209 chr3R 23564430 intron beat-IV + chr3R 23564534 intron beat-IV + chr3R 23564639 intron beat-IV + chr3R_4_23560001 chr3R_23560001 RAL-802_95b 1324 chr3R 23783977 23784003 chr3R 23784091 23784132 5 127 6.0 7.5 6.8 0.6 155 chr3R 23783977 intron mbc + chr3R 23784054 intron mbc + chr3R 23784132 intron mbc + chr3R_5_23780001 chr3R_23780001 RAL-802_95b 1325 chr3R 23835402 23835428 chr3R 23844562 23844588 roo 6 9167 1.0 3.5 2.2 1.9 9186 chr3R 23835402 intron CG34355 + chr3R 23839995 intron CG34355 + chr3R 23844588 intron CG34355 + chr3R_6_23835001 chr3R_23835001 RAL-802_95b 1326 chr3R 23851074 23851079 chr3R 23858761 23858766 opus 4 7687 6.5 9.0 7.8 0.5 7692 chr3R 23851074 3` UTR CG34355 + chr3R 23854920 intergenic not near genes chr3R 23858766 intergenic not near genes chr3R_4_23850001 chr3R_23850001 RAL-802_95b 1327 chr3R 23865023 23865059 chr3R 23865132 23865168 6 109 7.0 8.5 7.8 0.7 145 chr3R 23865023 intron Pli - chr3R 23865096 intron Pli - chr3R 23865168 intron Pli - chr3R_6_23865001 chr3R_23865001 RAL-802_95b 1328 chr3R 23888077 23888116 chr3R 23888171 23888222 13 99 3.0 3.5 3.2 3.1 145 chr3R 23888077 intron Pli - chr3R 23888150 intron Pli - chr3R 23888222 intron Pli - chr3R_13_23885001 chr3R_23885001 RAL-802_95b 1329 chr3R 23907784 23907821 chr3R 23907892 23907914 5 104 4.0 6.0 5.0 0.8 130 chr3R 23907784 intron sba - chr3R 23907849 intron sba - chr3R 23907914 intron sba - chr3R_5_23905001 chr3R_23905001 RAL-802_95b 1330 chr3R 23927663 23927701 chr3R 23927754 23927804 4 96 9.0 12.0 10.5 0.3 141 chr3R 23927663 intergenic CG13601 -,CG43998 -,CG43999 - chr3R 23927734 3` UTR,3` UTR CG43998 -,CG43999 - chr3R 23927804 exon,3` UTR CG43998 -,CG43999 - chr3R_4_23925001 chr3R_23925001 RAL-802_95b 1331 chr3R 23949021 23949075 chr3R 23949118 23949172 13 88 1.0 5.5 3.2 3.1 151 chr3R 23949021 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949172 intergenic not near genes chr3R_13_23945001 chr3R_23945001 RAL-802_95b 1332 chr3R 23962448 23962494 chr3R 23962577 23962623 9 127 9.0 9.0 9.0 0.9 175 chr3R 23962448 3` UTR AP-1sigma + chr3R 23962536 3` UTR AP-1sigma + chr3R 23962623 intergenic AP-1sigma + chr3R_9_23960001 chr3R_23960001 RAL-802_95b 1333 chr3R 24021618 24021656 chr3R 24021728 24021766 5 109 9.5 13.0 11.2 0.4 148 chr3R 24021618 intron KrT95D - chr3R 24021692 intron KrT95D - chr3R 24021766 intron KrT95D - chr3R_5_24020001 chr3R_24020001 RAL-802_95b 1334 chr3R 24076364 24076404 chr3R 24076471 24076511 9 104 5.0 4.5 4.8 1.6 147 chr3R 24076364 intron 4EHP - chr3R 24076438 intron 4EHP - chr3R 24076511 intron 4EHP - chr3R_9_24075001 chr3R_24075001 RAL-802_95b 1335 chr3R 24100464 24100484 chr3R 24100578 24100599 5 113 8.5 11.5 10.0 0.5 135 chr3R 24100464 intron 4EHP - chr3R 24100532 intron 4EHP - chr3R 24100599 intron 4EHP - chr3R_5_24100001 chr3R_24100001 RAL-802_95b 1336 chr3R 24167056 24167082 chr3R 24167156 24167171 5 96 7.0 6.5 6.8 0.6 115 chr3R 24167056 exon Apc2 + chr3R 24167114 intron Apc2 + chr3R 24167171 intron Apc2 + chr3R_5_24165001 chr3R_24165001 RAL-802_95b 1337 chr3R 24261179 24261212 chr3R 24261277 24261307 6 97 11.0 11.5 11.2 0.5 128 chr3R 24261179 intron jar - chr3R 24261243 intron jar - chr3R 24261307 intron jar - chr3R_6_24260001 chr3R_24260001 RAL-802_95b 1338 chr3R 24431597 24431625 chr3R 24431696 24431724 7 97 1.5 2.0 1.8 2.5 127 chr3R 24431597 intron nAChRalpha1 - chr3R 24431660 intron nAChRalpha1 - chr3R 24431724 intron nAChRalpha1 - chr3R_7_24430001 chr3R_24430001 RAL-802_95b 1339 chr3R 24493257 24493301 chr3R 24493506 24493549 BS 8 245 3.0 5.0 4.0 1.6 292 chr3R 24493257 intergenic not near genes chr3R 24493403 intergenic not near genes chr3R 24493549 intergenic not near genes chr3R_8_24490001 chr3R_24490001 RAL-802_95b 1340 chr3R 24544045 24544053 chr3R 24544141 24544149 4 96 6.5 7.5 7.0 0.5 104 chr3R 24544045 intergenic CG5789 - chr3R 24544097 intergenic CG5789 - chr3R 24544149 intergenic CG5789 - chr3R_4_24540001 chr3R_24540001 RAL-802_95b 1341 chr3R 24563260 24563279 chr3R 24563363 24563382 4 103 1.0 5.5 3.2 1.0 122 chr3R 24563260 intron CG13624 - chr3R 24563321 intron CG13624 - chr3R 24563382 intron CG13624 - chr3R_4_24560001 chr3R_24560001 RAL-802_95b 1342 chr3R 24588676 24588698 chr3R 24588797 24588804 4 117 4.5 9.0 6.8 0.5 128 chr3R 24588676 intron mld + chr3R 24588740 intron mld + chr3R 24588804 intron mld + chr3R_4_24585001 chr3R_24585001 RAL-802_95b 1343 chr3R 24670144 24670192 chr3R 24670247 24670254 15 101 2.5 3.0 2.8 3.9 110 chr3R 24670144 intron slo + chr3R 24670199 intron slo + chr3R 24670254 intron slo + chr3R_15_24670001 chr3R_24670001 RAL-802_95b 1344 chr3R 24741075 24741103 chr3R 24741182 24741220 7 116 6.5 5.5 6.0 1.0 145 chr3R 24741075 intron tok + chr3R 24741148 intron tok + chr3R 24741220 intron tok + chr3R_7_24740001 chr3R_24740001 RAL-802_95b 1345 chr3R 24912461 24912497 chr3R 24912563 24912597 5 102 2.5 5.5 4.0 1.0 136 chr3R 24912461 intergenic not near genes chr3R 24912529 intergenic CR44267 + chr3R 24912597 intergenic CR44267 + chr3R_5_24910001 chr3R_24910001 RAL-802_95b 1346 chr3R 25072744 25072789 chr3R 25072856 25072856 8 104 13.0 11.0 12.0 0.6 112 chr3R 25072744 3` UTR CG9996 - chr3R 25072800 3` UTR CG9996 - chr3R 25072856 3` UTR CG9996 - chr3R_8_25070001 chr3R_25070001 RAL-802_95b 1347 chr3R 25239203 25239227 chr3R 25239303 25239341 4 110 8.0 8.5 8.2 0.4 138 chr3R 25239203 intergenic CG11852 + chr3R 25239272 intergenic CG11852 + chr3R 25239341 intergenic CG11852 + chr3R_4_25235001 chr3R_25235001 RAL-802_95b 1348 chr3R 25300648 25300702 chr3R 25300784 25300818 9 130 3.5 3.5 3.5 2.0 170 chr3R 25300648 intergenic CG13659 + chr3R 25300733 intergenic CG13659 + chr3R 25300818 intergenic CG13659 + chr3R_9_25300001 chr3R_25300001 RAL-802_95b 1349 chr3R 25368453 25368486 chr3R 25368591 25368624 12 136 5.0 0.0 2.5 3.4 171 chr3R 25368453 intron Fur1 - chr3R 25368538 intron Fur1 - chr3R 25368624 intron Fur1 - chr3R_12_25365001 chr3R_25365001 RAL-802_95b 1350 chr3R 25374823 25374870 chr3R 25374921 25374968 5 96 9.0 8.0 8.5 0.5 145 chr3R 25374823 intron Fur1 - chr3R 25374896 intron Fur1 - chr3R 25374968 intron Fur1 - chr3R_5_25370001 chr3R_25370001 RAL-802_95b 1351 chr3R 25440765 25440807 chr3R 25440873 25440916 4 105 7.5 5.5 6.5 0.5 151 chr3R 25440765 intron Fur1 - chr3R 25440840 intron Fur1 - chr3R 25440916 intron Fur1 - chr3R_4_25440001 chr3R_25440001 RAL-802_95b 1352 chr3R 7773344 7773344 chr3R 25538124 25538124 5 17764780 10.5 5.5 8.0 0.6 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_5_16655001 chr3R_16655001 RAL-802_95b 1353 chr3R 25544832 25545117 chr3R 25544949 25545226 8 108 8.5 10.0 9.2 0.8 394 chr3R 25544832 intron msi + chr3R 25545029 intron msi + chr3R 25545226 intron msi + chr3R_8_25545001 chr3R_25545001 RAL-802_95b 1354 chr3R 25559728 25559775 chr3R 25559826 25559858 7 96 4.0 3.5 3.8 1.5 130 chr3R 25559728 intron msi + chr3R 25559793 intron msi + chr3R 25559858 intron msi + chr3R_7_25555001 chr3R_25555001 RAL-802_95b 1355 chr3R 25650564 25650606 chr3R 25650653 25650698 7 96 3.5 5.5 4.5 1.3 134 chr3R 25650564 intergenic jigr1 + chr3R 25650631 intergenic jigr1 + chr3R 25650698 intergenic jigr1 + chr3R_7_25650001 chr3R_25650001 RAL-802_95b 1356 chr3R 25661265 25661291 chr3R 25661364 25661390 4 99 2.5 6.0 4.2 0.8 125 chr3R 25661265 5` UTR Tnks - chr3R 25661328 intergenic Tnks -,CR45208 -,RASSF8 + chr3R 25661390 intergenic Tnks -,CR45208 -,RASSF8 + chr3R_4_25660001 chr3R_25660001 RAL-802_95b 1357 chr3R 25725806 25725850 chr3R 25734986 25735030 roo 7 9178 5.0 5.5 5.2 1.1 9224 chr3R 25725806 intron LpR2 - chr3R 25730418 intron LpR2 - chr3R 25735030 intron LpR2 - chr3R_7_25730001 chr3R_25730001 RAL-802_95b 1358 chr3R 25956447 25956473 chr3R 25956553 25956553 6 102 2.5 3.5 3.0 1.5 106 chr3R 25956447 intergenic CCAP-R - chr3R 25956500 intergenic CCAP-R - chr3R 25956553 intergenic CCAP-R - chr3R_6_25955001 chr3R_25955001 RAL-802_95b 1359 chr3R 26076228 26076269 chr3R 26076467 26076508 5 238 5.5 5.5 5.5 0.8 280 chr3R 26076228 intergenic dys - chr3R 26076368 intergenic dys - chr3R 26076508 intergenic dys - chr3R_5_26075001 chr3R_26075001 RAL-802_95b 1360 chr3R 26093823 26093869 chr3R 26093921 26093967 4 92 4.0 6.5 5.2 0.6 144 chr3R 26093823 intron dys - chr3R 26093895 intron dys - chr3R 26093967 intron dys - chr3R_4_26090001 chr3R_26090001 RAL-802_95b 1361 chr3R 26122447 26122471 chr3R 26122543 26122567 6 96 3.0 1.5 2.2 1.9 120 chr3R 26122447 intron CG31324 + chr3R 26122507 intron CG31324 + chr3R 26122567 intron CG31324 + chr3R_6_26120001 chr3R_26120001 RAL-802_95b 1362 chr3R 26143068 26143098 chr3R 26143171 26143195 6 102 15.0 15.0 15.0 0.4 127 chr3R 26143068 intergenic not near genes chr3R 26143132 intergenic not near genes chr3R 26143195 intergenic not near genes chr3R_6_26140001 chr3R_26140001 RAL-802_95b 1363 chr3R 26144672 26144715 chr3R 26144770 26144777 4 80 17.5 16.0 16.8 0.2 105 chr3R 26144672 intergenic not near genes chr3R 26144724 intergenic not near genes chr3R 26144777 intergenic not near genes chr3R_4_26140001 chr3R_26140001 RAL-802_95b 1364 chr3R 26149137 26149159 chr3R 26149331 26149355 5 195 4.5 11.0 7.8 0.6 218 chr3R 26149137 intergenic not near genes chr3R 26149246 intergenic not near genes chr3R 26149355 intergenic not near genes chr3R_5_26145001 chr3R_26145001 RAL-802_95b 1365 chr3R 26314841 26314886 chr3R 26315228 26315273 4 386 7.0 1.0 4.0 0.8 432 chr3R 26314841 intergenic not near genes chr3R 26315057 intergenic not near genes chr3R 26315273 intergenic not near genes chr3R_4_26315001 chr3R_26315001 RAL-802_95b 1366 chr3R 26374819 26374850 chr3R 26374941 26374962 5 119 11.0 5.0 8.0 0.6 143 chr3R 26374819 intergenic not near genes chr3R 26374890 intergenic not near genes chr3R 26374962 intergenic not near genes chr3R_5_26370001 chr3R_26370001 RAL-802_95b 1367 chr3R 26405902 26405935 chr3R 26405998 26406016 6 94 1.5 2.0 1.8 2.1 114 chr3R 26405902 intergenic not near genes chr3R 26405959 intergenic not near genes chr3R 26406016 intergenic not near genes chr3R_6_26405001 chr3R_26405001 RAL-802_95b 1368 chr3R 26529335 26529373 chr3R 26529438 26529441 7 93 10.5 6.5 8.5 0.7 106 chr3R 26529335 intron plum - chr3R 26529388 intron plum - chr3R 26529441 intron plum - chr3R_7_26525001 chr3R_26525001 RAL-802_95b 1369 chr3R 26558312 26558360 chr3R 26565645 26565659 Stalker4 5 7314 1.5 1.0 1.2 2.3 7347 chr3R 26558312 intron scrib + chr3R 26561986 intron scrib + chr3R 26565659 intron scrib + chr3R_5_26560001 chr3R_26560001 RAL-802_95b 1370 chr3R 26642720 26642752 chr3R 26643130 26643165 jockey 7 411 5.5 3.0 4.2 1.3 445 chr3R 26642720 intergenic not near genes chr3R 26642942 intergenic not near genes chr3R 26643165 intergenic not near genes chr3R_7_26640001 chr3R_26640001 RAL-802_95b 1371 chr3R 26661304 26661347 chr3R 26661414 26661446 4 107 2.5 2.5 2.5 1.1 142 chr3R 26661304 intron beat-VII - chr3R 26661375 intron beat-VII - chr3R 26661446 intron beat-VII - chr3R_4_26660001 chr3R_26660001 RAL-802_95b 1372 chr3R 26770220 26770273 chr3R 26770317 26770370 10 90 2.0 3.0 2.5 2.9 150 chr3R 26770220 intergenic CR45563 + chr3R 26770295 intergenic CR45563 + chr3R 26770370 intergenic not near genes chr3R_10_26770001 chr3R_26770001 RAL-802_95b 1373 chr3R 26810532 26810584 chr3R 26811037 26811089 roo 7 503 2.5 2.5 2.5 2.0 557 chr3R 26810532 intron Tl + chr3R 26810810 intron Tl + chr3R 26811089 intron Tl + chr3R_7_26810001 chr3R_26810001 RAL-802_95b 1374 chr3R 26825051 26825091 chr3R 26825146 26825167 7 93 6.5 6.0 6.2 1.0 116 chr3R 26825051 intron Tl + chr3R 26825109 intron Tl + chr3R 26825167 intron Tl + chr3R_7_26825001 chr3R_26825001 RAL-802_95b 1375 chr3R 26896762 26896787 chr3R 26896860 26896885 4 98 11.5 10.0 10.8 0.3 123 chr3R 26896762 intron T48 + chr3R 26896824 intron T48 + chr3R 26896885 intron T48 + chr3R_4_26895001 chr3R_26895001 RAL-802_95b 1376 chr3R 27007398 27007418 chr3R 27016547 27016552 roo 7 9148 3.5 2.0 2.8 1.8 9154 chr3R 27007398 intron RYa-R + chr3R 27011975 intron RYa-R + chr3R 27016552 intron RYa-R + chr3R_7_27010001 chr3R_27010001 RAL-802_95b 1377 chr3R 27028702 27028753 chr3R 27028801 27028826 9 88 7.5 5.5 6.5 1.2 124 chr3R 27028702 intron RYa-R + chr3R 27028764 intron RYa-R + chr3R 27028826 intron RYa-R + chr3R_9_27025001 chr3R_27025001 RAL-802_95b 1378 chr3R 27102040 27102073 chr3R 27102154 27102187 4 111 5.5 5.5 5.5 0.6 147 chr3R 27102040 intron CG17189 + chr3R 27102114 intron CG17189 + chr3R 27102187 intron CG17189 + chr3R_4_27100001 chr3R_27100001 RAL-802_95b 1379 chr3R 27140510 27140540 chr3R 27148124 27148148 412 8 7620 2.5 0.5 1.5 3.2 7638 chr3R 27140510 intron CG6051 - chr3R 27144329 intron CG6051 - chr3R 27148148 intron CG6051 - chr3R_8_27140001 chr3R_27140001 RAL-802_95b 1380 chr3R 27329478 27329491 chr3R 27329563 27329573 4 85 6.5 9.0 7.8 0.5 95 chr3R 27329478 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329573 intergenic CG3330 - chr3R_4_27325001 chr3R_27325001 RAL-802_95b 1381 chr3R 27452575 27452594 chr3R 27452775 27452794 4 198 3.5 4.5 4.0 0.8 219 chr3R 27452575 intergenic not near genes chr3R 27452684 intergenic not near genes chr3R 27452794 intergenic not near genes chr3R_4_27450001 chr3R_27450001 RAL-802_95b 1382 chr3R 27492359 27492393 chr3R 27492466 27492500 8 107 4.0 2.5 3.2 1.9 141 chr3R 27492359 intergenic not near genes chr3R 27492430 intergenic not near genes chr3R 27492500 intergenic not near genes chr3R_8_27490001 chr3R_27490001 RAL-802_95b 1383 chr3R 27496573 27496602 chr3R 27496698 27496700 4 118 4.5 5.0 4.8 0.7 127 chr3R 27496573 intergenic not near genes chr3R 27496636 intergenic not near genes chr3R 27496700 intergenic not near genes chr3R_4_27495001 chr3R_27495001 RAL-802_95b 1384 chr3R 27521143 27521183 chr3R 27530372 27530412 roo 15 9223 4.5 1.5 3.0 3.8 9269 chr3R 27521143 intron CG12885 + chr3R 27525778 intron CG12885 + chr3R 27530412 intron CG12885 + chr3R_15_27525001 chr3R_27525001 RAL-802_95b 1385 chr3R 27725553 27725589 chr3R 27731015 27731042 I-element 5 5454 4.0 1.5 2.8 1.3 5489 chr3R 27725553 intergenic not near genes chr3R 27728298 intergenic not near genes chr3R 27731042 intergenic not near genes chr3R_5_27725001 chr3R_27725001 RAL-802_95b 1386 chr3R 27799946 27799961 chr3R 27800048 27800063 4 101 5.5 5.5 5.5 0.6 117 chr3R 27799946 intron CG34353 - chr3R 27800004 intron CG34353 - chr3R 27800063 intron CG34353 - chr3R_4_27800001 chr3R_27800001 RAL-802_95b 1387 chr3R 27875710 27875731 chr3R 27882770 27882806 297 6 7072 0.5 4.0 2.2 1.9 7096 chr3R 27875710 intron CG34353 - chr3R 27879258 intron CG34353 - chr3R 27882806 intron CG34353 - chr3R_6_27875001 chr3R_27875001 RAL-802_95b 1388 chr3R 28016634 28016667 chr3R 28016737 28016772 5 100 6.0 2.0 4.0 1.0 138 chr3R 28016634 intergenic not near genes chr3R 28016703 intergenic not near genes chr3R 28016772 intergenic not near genes chr3R_5_28015001 chr3R_28015001 RAL-802_95b 1389 chr3R 28124147 28124160 chr3R 28124251 28124269 6 108 2.0 1.5 1.8 2.1 122 chr3R 28124147 intergenic not near genes chr3R 28124208 intergenic not near genes chr3R 28124269 intergenic not near genes chr3R_6_28120001 chr3R_28120001 RAL-802_95b 1390 chr3R 28173652 28173694 chr3R 28181102 28181144 mdg1 6 7446 1.5 1.5 1.5 2.4 7492 chr3R 28173652 intron CG34354 + chr3R 28177398 intron CG34354 + chr3R 28181144 intron CG34354 + chr3R_6_28175001 chr3R_28175001 RAL-802_95b 1391 chr3R 28302091 28302106 chr3R 28302553 28302568 jockey 5 462 2.0 4.5 3.2 1.2 477 chr3R 28302091 intergenic not near genes chr3R 28302330 intergenic not near genes chr3R 28302568 intergenic not near genes chr3R_5_28300001 chr3R_28300001 RAL-802_95b 1392 chr3R 28319333 28319339 chr3R 28319429 28319435 5 96 3.5 2.5 3.0 1.2 102 chr3R 28319333 3` UTR larp - chr3R 28319384 3` UTR larp - chr3R 28319435 3` UTR larp - chr3R_5_28315001 chr3R_28315001 RAL-802_95b 1393 chr3R 28552775 28552788 chr3R 28553147 28553156 8 372 2.5 5.0 3.8 1.7 381 chr3R 28552775 intergenic not near genes chr3R 28552966 intergenic not near genes chr3R 28553156 intergenic not near genes chr3R_8_28550001 chr3R_28550001 RAL-802_95b 1394 chr3R 28597495 28597507 chr3R 28597570 28597579 4 79 0.5 1.0 0.8 2.2 84 chr3R 28597495 intergenic not near genes chr3R 28597537 intergenic not near genes chr3R 28597579 intergenic Noa36 - chr3R_4_28595001 chr3R_28595001 RAL-802_95b 1395 chr3R 28631822 28631865 chr3R 28631926 28631944 6 95 0.5 6.0 3.2 1.4 122 chr3R 28631822 intron CG10011 - chr3R 28631883 intron CG10011 - chr3R 28631944 intron CG10011 - chr3R_6_28630001 chr3R_28630001 RAL-802_95b 1396 chr3R 28659103 28659115 chr3R 28659278 28659290 5 181 1.0 0.5 0.8 2.8 187 chr3R 28659103 intergenic not near genes chr3R 28659196 intergenic not near genes chr3R 28659290 intergenic not near genes chr3R_5_28655001 chr3R_28655001 RAL-802_95b 1397 chr3R 28742482 28742515 chr3R 28742565 28742579 5 87 1.5 3.0 2.2 1.6 97 chr3R 28742482 intron AstA-R2 - chr3R 28742530 intron AstA-R2 - chr3R 28742579 intron AstA-R2 - chr3R_5_28740001 chr3R_28740001 RAL-802_95b 1398 chr3R 28758267 28758285 chr3R 28763904 28763922 roo 6 5637 3.0 0.0 1.5 2.4 5655 chr3R 28758267 intergenic aqrs - chr3R 28761094 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_6_28760001 chr3R_28760001 RAL-802_95b 1399 chr3R 28758302 28758319 chr3R 28771329 28771346 Stalker4 7 13027 1.5 0.0 0.8 3.9 13044 chr3R 28758302 intergenic aqrs - chr3R 28764824 intergenic not near genes chr3R 28771346 intergenic not near genes chr3R_7_28760001 chr3R_28760001 RAL-802_95b 1400 chr3R 21907534 21907536 chr3R 28831799 28831802 5 6924266 8.5 4.0 6.2 0.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_5_25365001 chr3R_25365001 RAL-802_95b 1401 chr3R 28947950 28947998 chr3R 28948082 28948129 5 129 6.0 4.5 5.2 0.8 179 chr3R 28947950 intron CG14521 - chr3R 28948040 intron CG14521 - chr3R 28948129 intron CG14521 - chr3R_5_28945001 chr3R_28945001 RAL-802_95b 1402 chr3R 28960495 28960542 chr3R 28960600 28960647 7 104 1.0 4.0 2.5 2.0 152 chr3R 28960495 intron CG14521 - chr3R 28960571 intron CG14521 - chr3R 28960647 intron CG14521 - chr3R_7_28960001 chr3R_28960001 RAL-802_95b 1403 chr3R 29032737 29032769 chr3R 29032834 29032854 6 94 3.5 0.5 2.0 2.0 117 chr3R 29032737 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032796 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032854 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_6_29030001 chr3R_29030001 RAL-802_95b 1404 chr3R 29079362 29079399 chr3R 29080754 29080780 NOF 5 1386 5.0 5.0 5.0 0.8 1418 chr3R 29079362 intron CG11873 + chr3R 29080071 intron CG11873 + chr3R 29080780 intron CG11873 + chr3R_5_29080001 chr3R_29080001 RAL-802_95b 1405 chr3R 29248930 29248946 chr3R 29249026 29249042 5 95 5.0 4.0 4.5 0.9 112 chr3R 29248930 intron SP1029 - chr3R 29248986 intron SP1029 - chr3R 29249042 intron SP1029 - chr3R_5_29245001 chr3R_29245001 RAL-802_95b 1406 chr3R 29249910 29249919 chr3R 29250003 29250028 4 102 5.5 6.5 6.0 0.6 118 chr3R 29249910 intron SP1029 - chr3R 29249969 intron SP1029 - chr3R 29250028 intron SP1029 - chr3R_4_29245001 chr3R_29245001 RAL-802_95b 1407 chr3R 29290071 29290102 chr3R 29290167 29290198 7 88 2.5 0.5 1.5 2.8 127 chr3R 29290071 intergenic not near genes chr3R 29290134 intergenic not near genes chr3R 29290198 intergenic not near genes chr3R_7_29290001 chr3R_29290001 RAL-802_95b 1408 chr3R 29306167 29306191 chr3R 29306264 29306289 4 96 0.0 1.5 0.8 2.2 122 chr3R 29306167 intergenic not near genes chr3R 29306228 intergenic not near genes chr3R 29306289 intergenic not near genes chr3R_4_29305001 chr3R_29305001 RAL-802_95b 1409 chr3R 29319806 29319837 chr3R 29320145 29320176 jockey 5 339 3.5 2.5 3.0 1.2 370 chr3R 29319806 intergenic Cnx99A - chr3R 29319991 intergenic Cnx99A - chr3R 29320176 intergenic not near genes chr3R_5_29315001 chr3R_29315001 RAL-802_95b 1410 chr3R 29402980 29403006 chr3R 29403080 29403121 7 113 0.5 2.5 1.5 2.8 141 chr3R 29402980 intron Ptp99A + chr3R 29403050 intron Ptp99A + chr3R 29403121 intron Ptp99A + chr3R_7_29400001 chr3R_29400001 RAL-802_95b 1411 chr3R 29406620 29406638 chr3R 29407899 29407935 jockey 4 1297 1.0 2.0 1.5 1.6 1315 chr3R 29406620 intron Ptp99A + chr3R 29407278 intron Ptp99A + chr3R 29407935 intron Ptp99A + chr3R_4_29405001 chr3R_29405001 RAL-802_95b 1412 chr3R 29449354 29449383 chr3R 29449452 29449481 4 94 2.0 2.0 2.0 1.3 127 chr3R 29449354 intron Ptp99A + chr3R 29449418 intron Ptp99A + chr3R 29449481 intron Ptp99A + chr3R_4_29445001 chr3R_29445001 RAL-802_95b 1413 chr3R 29566371 29566412 chr3R 29566468 29566509 10 96 3.0 4.0 3.5 2.2 138 chr3R 29566371 intergenic not near genes chr3R 29566440 intergenic not near genes chr3R 29566509 intergenic not near genes chr3R_10_29565001 chr3R_29565001 RAL-802_95b 1414 chr3R 29575824 29575833 chr3R 29575927 29575935 4 103 5.5 0.0 2.8 1.1 111 chr3R 29575824 intergenic not near genes chr3R 29575880 intergenic not near genes chr3R 29575935 intergenic not near genes chr3R_4_29575001 chr3R_29575001 RAL-802_95b 1415 chr3R 29590377 29590395 chr3R 29590471 29590482 5 103 0.5 0.5 0.5 3.3 105 chr3R 29590377 intron CG31041 - chr3R 29590430 intron CG31041 - chr3R 29590482 intron CG31041 - chr3R_5_29590001 chr3R_29590001 RAL-802_95b 1416 chr3R 29609151 29609197 chr3R 29609254 29609304 9 105 0.0 1.0 0.5 6.0 153 chr3R 29609151 intron alph + chr3R 29609228 intron alph + chr3R 29609304 intron alph + chr3R_9_29605001 chr3R_29605001 RAL-802_95b 1417 chr3R 29655638 29655662 chr3R 29655737 29655761 5 98 2.5 0.5 1.5 2.0 123 chr3R 29655638 intron Dop1R2 - chr3R 29655700 intron Dop1R2 - chr3R 29655761 intron Dop1R2 - chr3R_5_29655001 chr3R_29655001 RAL-802_95b 1418 chr3R 29718159 29718193 chr3R 29718303 29718350 6 153 2.5 3.0 2.8 1.6 191 chr3R 29718159 intergenic not near genes chr3R 29718254 intergenic CG15506 + chr3R 29718350 intergenic CG15506 + chr3R_6_29715001 chr3R_29715001 RAL-802_95b 1419 chr3R 29738255 29738287 chr3R 29739742 29739774 hobo 8 1487 6.5 1.5 4.0 1.6 1519 chr3R 29738255 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739774 5` UTR CG1969 + chr3R_8_29735001 chr3R_29735001 RAL-802_95b 1420 chr3R 29760341 29760388 chr3R 29761562 29761609 pogo 17 1219 2.5 4.5 3.5 3.8 1268 chr3R 29760341 intergenic not near genes chr3R 29760975 intergenic not near genes chr3R 29761609 intergenic not near genes chr3R_17_29760001 chr3R_29760001 RAL-802_95b 1421 chr3R 29773863 29773899 chr3R 29773970 29774010 6 109 3.5 0.0 1.8 2.1 147 chr3R 29773863 intron kay + chr3R 29773936 intron kay + chr3R 29774010 intron kay + chr3R_6_29770001 chr3R_29770001 RAL-802_95b 1422 chr3R 29780578 29780625 chr3R 29780741 29780768 6 157 4.5 3.0 3.8 1.2 190 chr3R 29780578 intron kay + chr3R 29780673 intron kay + chr3R 29780768 intron kay + chr3R_6_29780001 chr3R_29780001 RAL-802_95b 1423 chr3R 29882003 29882016 chr3R 29891180 29891182 roo 5 9175 4.5 2.5 3.5 1.1 9179 chr3R 29882003 intron CG31038 + chr3R 29886592 intron CG31038 + chr3R 29891182 intron CG31038 + chr3R_5_29885001 chr3R_29885001 RAL-802_95b 1424 chr3R 29882018 29882051 chr3R 29891175 29891228 roo 7 9164 2.5 2.5 2.5 2.0 9210 chr3R 29882018 intron CG31038 + chr3R 29886623 intron CG31038 + chr3R 29891228 intron CG31038 + chr3R_7_29885001 chr3R_29885001 RAL-802_95b 1425 chr3R 29963491 29963506 chr3R 29963583 29963628 6 112 1.5 1.5 1.5 2.4 137 chr3R 29963491 intron TkR99D - chr3R 29963560 intron TkR99D - chr3R 29963628 intron TkR99D - chr3R_6_29960001 chr3R_29960001 RAL-802_95b 1426 chr3R 30025341 30025386 chr3R 30025441 30025481 12 98 3.5 1.5 2.5 3.4 140 chr3R 30025341 intron Axn + chr3R 30025411 intron Axn + chr3R 30025481 5` UTR Axn + chr3R_12_30025001 chr3R_30025001 RAL-802_95b 1427 chr3R 30081852 30081866 chr3R 30081940 30081963 5 92 0.5 0.0 0.2 4.2 111 chr3R 30081852 intron sima + chr3R 30081908 intron sima + chr3R 30081963 intron sima + chr3R_5_30080001 chr3R_30080001 RAL-802_95b 1428 chr3R 30097496 30097662 chr3R 30097565 30097821 12 128 2.0 2.0 2.0 4.0 325 chr3R 30097496 intron sima + chr3R 30097658 intron sima + chr3R 30097821 intron sima + chr3R_12_30095001 chr3R_30095001 RAL-802_95b 1429 chr3R 30170753 30170790 chr3R 30170860 30170897 9 102 2.0 4.5 3.2 2.1 144 chr3R 30170753 intron CG31028 - chr3R 30170825 intron CG31028 - chr3R 30170897 intron CG31028 - chr3R_9_30170001 chr3R_30170001 RAL-802_95b 1430 chr3R 30183221 30183245 chr3R 30183350 30183374 4 129 1.5 6.0 3.8 0.8 153 chr3R 30183221 intergenic not near genes chr3R 30183298 intergenic not near genes chr3R 30183374 intergenic CR44262 - chr3R_4_30180001 chr3R_30180001 RAL-802_95b 1431 chr3R 30224632 30224672 chr3R 30224730 30224770 7 94 3.5 1.5 2.5 2.0 138 chr3R 30224632 intergenic not near genes chr3R 30224701 intergenic not near genes chr3R 30224770 intergenic not near genes chr3R_7_30220001 chr3R_30220001 RAL-802_95b 1432 chr3R 30238742 30238797 chr3R 30239926 30239980 1360 16 1182 4.0 5.0 4.5 2.9 1238 chr3R 30238742 intergenic not near genes chr3R 30239361 intergenic not near genes chr3R 30239980 intergenic not near genes chr3R_16_30235001 chr3R_30235001 RAL-802_95b 1433 chr3R 30259510 30259524 chr3R 30260573 30260577 4 1061 14.5 9.0 11.8 0.3 1067 chr3R 30259510 intergenic not near genes chr3R 30260044 intergenic not near genes chr3R 30260577 intergenic not near genes chr3R_4_30260001 chr3R_30260001 RAL-802_95b 1434 chr3R 30259305 30259352 chr3R 30261000 30261037 7 1690 10.5 16.5 13.5 0.5 1732 chr3R 30259305 intergenic not near genes chr3R 30260171 intergenic not near genes chr3R 30261037 intergenic not near genes chr3R_7_30260001 chr3R_30260001 RAL-802_95b 1435 chr3R 30350415 30350447 chr3R 30350519 30350519 6 98 0.5 1.5 1.0 3.0 104 chr3R 30350415 intron hdc + chr3R 30350467 intron hdc + chr3R 30350519 intron hdc + chr3R_6_30350001 chr3R_30350001 RAL-802_95b 1436 chr3R 30375539 30375567 chr3R 30383164 30383212 412 12 7636 4.0 0.5 2.2 3.8 7673 chr3R 30375539 intergenic not near genes chr3R 30379376 intergenic not near genes chr3R 30383212 intergenic not near genes chr3R_12_30375001 chr3R_30375001 RAL-802_95b 1437 chr3R 30396213 30396243 chr3R 30404489 30404529 roo 8 8281 2.5 4.5 3.5 1.8 8316 chr3R 30396213 intergenic not near genes chr3R 30400371 intergenic not near genes chr3R 30404529 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 RAL-802_95b 1438 chr3R 30461487 30461515 chr3R 30461613 30461652 9 135 2.0 4.5 3.2 2.1 165 chr3R 30461487 intron CDase + chr3R 30461570 intron CDase + chr3R 30461652 intron CDase + chr3R_9_30460001 chr3R_30460001 RAL-802_95b 1439 chr3R 30591282 30591337 chr3R 30591396 30591443 7 106 0.5 1.0 0.8 3.9 161 chr3R 30591282 intergenic not near genes chr3R 30591362 intergenic not near genes chr3R 30591443 intergenic not near genes chr3R_7_30590001 chr3R_30590001 RAL-802_95b 1440 chr3R 30650796 30650811 chr3R 30650913 30650928 4 117 0.0 0.5 0.2 3.3 132 chr3R 30650796 3` UTR CG34433 + chr3R 30650862 intergenic CG34433 + chr3R 30650928 intergenic CG34433 + chr3R_4_30650001 chr3R_30650001 RAL-802_95b 1441 chr3R 30747542 30747549 chr3R 30747623 30747644 4 90 2.0 0.5 1.2 1.8 102 chr3R 30747542 intergenic CR43238 - chr3R 30747593 intergenic CR43238 - chr3R 30747644 intergenic CR43238 - chr3R_4_30745001 chr3R_30745001 RAL-802_95b 1442 chr3R 30818795 30818841 chr3R 30820380 30820426 1360 13 1584 5.5 5.5 5.5 2.0 1631 chr3R 30818795 intron cindr + chr3R 30819610 intron cindr + chr3R 30820426 intron cindr + chr3R_13_30815001 chr3R_30815001 RAL-802_95b 1443 chr3R 30823392 30823406 chr3R 30823508 30823515 4 114 3.5 2.0 2.8 1.1 123 chr3R 30823392 intron cindr + chr3R 30823454 intron cindr + chr3R 30823515 intron cindr + chr3R_4_30820001 chr3R_30820001 RAL-802_95b 1444 chr3R 30850226 30850237 chr3R 30850338 30850349 5 112 6.0 3.0 4.5 0.9 123 chr3R 30850226 intergenic not near genes chr3R 30850288 intergenic not near genes chr3R 30850349 intergenic not near genes chr3R_5_30850001 chr3R_30850001 RAL-802_95b 1445 chr3R 30850250 30850270 chr3R 30850332 30850367 6 104 2.0 2.5 2.2 1.9 117 chr3R 30850250 intergenic not near genes chr3R 30850308 intergenic not near genes chr3R 30850367 intergenic not near genes chr3R_6_30850001 chr3R_30850001 RAL-802_95b 1446 chr3R 30888921 30888949 chr3R 30893428 30893476 10 4515 18.5 29.0 23.8 0.4 4555 chr3R 30888921 exon Sap-r - chr3R 30891198 intergenic not near genes chr3R 30893476 intergenic not near genes chr3R_10_30890001 chr3R_30890001 RAL-802_95b 1447 chr3R 30900506 30900545 chr3R 30900606 30900645 5 97 4.5 2.0 3.2 1.2 139 chr3R 30900506 exon Cyp4c3 + chr3R 30900576 3` UTR Cyp4c3 + chr3R 30900645 3` UTR Cyp4c3 + chr3R_5_30900001 chr3R_30900001 RAL-802_95b 1448 chr3R 30936422 30936453 chr3R 30939169 30939180 5 2737 23.0 8.0 15.5 0.3 2758 chr3R 30936422 exon CG15549 - chr3R 30937801 intergenic not near genes chr3R 30939180 intergenic not near genes chr3R_5_30935001 chr3R_30935001 RAL-802_95b 1449 chr3R 30965855 30965860 chr3R 30965943 30965966 4 101 0.5 1.0 0.8 2.2 111 chr3R 30965855 intergenic not near genes chr3R 30965910 intergenic not near genes chr3R 30965966 intergenic not near genes chr3R_4_30965001 chr3R_30965001 RAL-802_95b 1450 chr3R 30996626 30996670 chr3R 30996865 30996904 13 234 3.0 6.5 4.8 2.2 278 chr3R 30996626 intron 5-HT7 - chr3R 30996765 intron 5-HT7 - chr3R 30996904 intron 5-HT7 - chr3R_13_30995001 chr3R_30995001 RAL-802_95b 1451 chr3R 31040820 31040870 chr3R 31040925 31040975 14 102 2.0 1.5 1.8 5.0 155 chr3R 31040820 intron CanA1 + chr3R 31040898 intron CanA1 + chr3R 31040975 intron CanA1 + chr3R_14_31040001 chr3R_31040001 RAL-802_95b 1452 chr3R 31413091 31413113 chr3R 31418289 31418308 copia 4 5207 0.0 1.0 0.5 2.7 5217 chr3R 31413091 intron Gprk2 + chr3R 31415700 intron Gprk2 + chr3R 31418308 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-802_95b 1453 chr3R 31426871 31426909 chr3R 31426983 31426998 9 107 2.5 6.5 4.5 1.6 127 chr3R 31426871 intron Gprk2 + chr3R 31426934 intron Gprk2 + chr3R 31426998 intron Gprk2 + chr3R_9_31425001 chr3R_31425001 RAL-802_95b 1454 chr3R 31440733 31440768 chr3R 31440834 31440866 4 100 3.0 2.0 2.5 1.1 133 chr3R 31440733 intron Gprk2 + chr3R 31440800 intron Gprk2 + chr3R 31440866 intron Gprk2 + chr3R_4_31440001 chr3R_31440001 RAL-802_95b 1455 chr3R 31443997 31444010 chr3R 31444105 31444118 4 113 1.5 5.0 3.2 1.0 121 chr3R 31443997 intron Gprk2 + chr3R 31444058 intron Gprk2 + chr3R 31444118 intron Gprk2 + chr3R_4_31440001 chr3R_31440001 RAL-802_95b 1456 chr3R 31720216 31720231 chr3R 31720485 31720493 7 276 1.0 4.0 2.5 2.0 277 chr3R 31720216 intron ttk + chr3R 31720354 intron ttk + chr3R 31720493 intron ttk + chr3R_7_31720001 chr3R_31720001 RAL-802_95b 1457 chr3R 31931181 31931216 chr3R 31931284 31931319 7 100 2.0 1.5 1.8 2.5 138 chr3R 31931181 intron heph - chr3R 31931250 intron heph - chr3R 31931319 intron heph - chr3R_7_31930001 chr3R_31930001 RAL-802_95b 1458 chr3R 31997980 31998022 chr3R 32005470 32005508 blood 11 7487 1.5 3.5 2.5 3.1 7528 chr3R 31997980 intron heph - chr3R 32001744 intron heph - chr3R 32005508 intron heph - chr3R_11_32000001 chr3R_32000001 RAL-802_95b 1459 chr4 319974 320018 chr4 328170 328204 Stalker2 12 8193 2.0 3.5 2.8 3.2 8230 chr4 319974 3` UTR CG32850 + chr4 324089 intron CG32850 + chr4 328204 3` UTR,3` UTR CG32850 +,PMCA - chr4_12_320001 chr4_320001 RAL-802_95b 1460 chr4 671586 671630 chr4 680189 680233 Tirant 10 8596 5.0 3.5 4.2 1.9 8647 chr4 671586 intron CG11360 + chr4 675910 intron CG11360 + chr4 680233 intron CG11360 + chr4_10_675001 chr4_675001 RAL-802_95b 1461 chr4 959604 959638 chr4 959803 959837 8 192 2.0 3.0 2.5 2.3 233 chr4 959604 intergenic CR44030 +,CR45201 - chr4 959720 5` UTR CR44030 + chr4 959837 5` UTR CR44030 + chr4_8_955001 chr4_955001 RAL-802_95b 1462 chr4 972472 972521 chr4 972574 972618 10 99 1.0 2.5 1.8 3.6 146 chr4 972472 intron fuss - chr4 972545 intron fuss - chr4 972618 intron fuss - chr4_10_970001 chr4_970001 RAL-802_95b 1463 chrX 188385 188420 chrX 188481 188494 6 92 3.5 3.5 3.5 1.3 109 chrX 188385 intron tyn + chrX 188440 intron tyn + chrX 188494 intron tyn + chrX_6_185001 chrX_185001 RAL-802_95b 1464 chrX 428401 428443 chrX 434606 434648 3S18 5 6205 3.5 3.5 3.5 1.1 6247 chrX 428401 intron CG32816 - chrX 431524 intron CG32816 - chrX 434648 intron CG32816 - chrX_5_430001 chrX_430001 RAL-802_95b 1465 chrX 611121 611163 chrX 611229 611273 12 108 1.0 4.0 2.5 3.4 152 chrX 611121 intron CG13366 - chrX 611197 intron CG13366 - chrX 611273 intron CG13366 - chrX_12_610001 chrX_610001 RAL-802_95b 1466 chrX 667639 667682 chrX 667733 667775 5 100 0.5 2.0 1.2 2.3 136 chrX 667639 intergenic not near genes chrX 667707 intergenic not near genes chrX 667775 intergenic not near genes chrX_5_665001 chrX_665001 RAL-802_95b 1467 chrX 695297 695319 chrX 695369 695415 5 84 1.5 1.0 1.2 2.3 118 chrX 695297 intron sdk + chrX 695356 intron sdk + chrX 695415 intron sdk + chrX_5_695001 chrX_695001 RAL-802_95b 1468 chrX 812254 812288 chrX 817905 817923 297 8 5645 4.5 3.0 3.8 1.7 5669 chrX 812254 intron CG43867 - chrX 815088 intron CG43867 - chrX 817923 intron CG43867 - chrX_8_815001 chrX_815001 RAL-802_95b 1469 chrX 827594 827635 chrX 835391 835393 roo 8 7791 1.5 2.0 1.8 2.9 7799 chrX 827594 intron CG43867 - chrX 831494 intron CG43867 - chrX 835393 intron CG43867 - chrX_8_830001 chrX_830001 RAL-802_95b 1470 chrX 1053119 1053120 chrX 16983076 16983077 6 15929956 2.0 14.0 8.0 0.7 15929958 chrX 1053119 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_6_9015001 chrX_9015001 RAL-802_95b 1471 chrX 1357759 1357798 chrX 1367949 1367988 Doc 8 10188 2.0 1.0 1.5 3.2 10229 chrX 1357759 intergenic png - chrX 1362874 intergenic not near genes chrX 1367988 intergenic not near genes chrX_8_1360001 chrX_1360001 RAL-802_95b 1472 chrX 1996404 1996421 chrX 1996488 1996520 7 96 0.5 3.5 2.0 2.3 116 chrX 1996404 intron Hr4 + chrX 1996462 intron Hr4 + chrX 1996520 intron Hr4 + chrX_7_1995001 chrX_1995001 RAL-802_95b 1473 chrX 2429650 2429666 chrX 2429751 2429762 4 100 0.0 2.5 1.2 1.8 112 chrX 2429650 intergenic not near genes chrX 2429706 intergenic not near genes chrX 2429762 intergenic not near genes chrX_4_2425001 chrX_2425001 RAL-802_95b 1474 chrX 2664377 2664413 chrX 2665536 2665579 1360 5 1154 4.5 5.5 5.0 0.8 1202 chrX 2664377 intron sgg + chrX 2664978 intron sgg + chrX 2665579 intron sgg + chrX_5_2660001 chrX_2660001 RAL-802_95b 1475 chrX 2803474 2803523 chrX 2803637 2803640 4 150 2.0 0.5 1.2 1.8 166 chrX 2803474 intron kirre + chrX 2803557 intron kirre + chrX 2803640 intron kirre + chrX_4_2800001 chrX_2800001 RAL-802_95b 1476 chrX 2844896 2844930 chrX 2852326 2852360 mdg1 6 7428 1.5 3.5 2.5 1.7 7464 chrX 2844896 intron kirre + chrX 2848628 intron kirre + chrX 2852360 intron kirre + chrX_6_2845001 chrX_2845001 RAL-802_95b 1477 chrX 3243613 3243636 chrX 3243724 3243727 4 104 4.0 5.0 4.5 0.7 114 chrX 3243613 intron dnc + chrX 3243670 intron dnc + chrX 3243727 intron dnc + chrX_4_3240001 chrX_3240001 RAL-802_95b 1478 chrX 3247438 3247466 chrX 3247533 3247567 5 100 2.0 0.5 1.2 2.3 129 chrX 3247438 intron dnc + chrX 3247502 intron dnc + chrX 3247567 intron dnc + chrX_5_3245001 chrX_3245001 RAL-802_95b 1479 chrX 3629830 3629867 chrX 3629935 3629971 7 105 3.5 0.5 2.0 2.3 141 chrX 3629830 intron AstA-R1 + chrX 3629900 intron AstA-R1 + chrX 3629971 intron AstA-R1 + chrX_7_3625001 chrX_3625001 RAL-802_95b 1480 chrX 3726748 3726782 chrX 3730165 3730196 NOF 4 3415 1.5 0.0 0.8 2.2 3448 chrX 3726748 intron tlk + chrX 3728472 intron tlk + chrX 3730196 intron tlk + chrX_4_3725001 chrX_3725001 RAL-802_95b 1481 chrX 3752386 3752407 chrX 3764755 3764755 17.6 6 12365 6.0 14.5 10.2 0.5 12369 chrX 3752386 intron tlk + chrX 3758570 intron tlk + chrX 3764755 intron tlk + chrX_6_3755001 chrX_3755001 RAL-802_95b 1482 chrX 3842334 3842340 chrX 3842572 3842578 pogo 4 238 3.0 1.5 2.2 1.2 244 chrX 3842334 intron ec + chrX 3842456 intron ec + chrX 3842578 intron ec + chrX_4_3840001 chrX_3840001 RAL-802_95b 1483 chrX 3915523 3915551 chrX 3915630 3915638 6 103 0.5 5.0 2.8 1.6 115 chrX 3915523 intron CG42541 - chrX 3915580 intron CG42541 - chrX 3915638 intron CG42541 - chrX_6_3915001 chrX_3915001 RAL-802_95b 1484 chrX 3986847 3986888 chrX 3994494 3994526 412 4 7646 1.5 3.0 2.2 1.2 7679 chrX 3986847 intergenic not near genes chrX 3990686 intergenic not near genes chrX 3994526 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-802_95b 1485 chrX 4389377 4389380 chrX 12946235 12946235 4 8556856 4.0 10.5 7.2 0.5 8556858 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_4_8665001 chrX_8665001 RAL-802_95b 1486 chrX 4763242 4763259 chrX 4763750 4763767 Stalker4 4 505 1.5 2.5 2.0 1.3 525 chrX 4763242 intergenic not near genes chrX 4763504 intergenic not near genes chrX 4763767 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-802_95b 1487 chrX 4792367 4792407 chrX 4792815 4792818 jockey 5 443 1.0 2.0 1.5 2.0 451 chrX 4792367 intergenic not near genes chrX 4792592 intergenic not near genes chrX 4792818 intergenic not near genes chrX_5_4790001 chrX_4790001 RAL-802_95b 1488 chrX 4878876 4878907 chrX 4879005 4879036 4 129 0.5 0.5 0.5 2.7 160 chrX 4878876 intron CG42594 + chrX 4878956 intron CG42594 + chrX 4879036 intron CG42594 + chrX_4_4875001 chrX_4875001 RAL-802_95b 1489 chrX 4990021 4990070 chrX 4997255 4997262 roo 12 7223 1.0 1.0 1.0 6.0 7241 chrX 4990021 intron CR44833 - chrX 4993642 intron CR44833 - chrX 4997262 intron CR44833 - chrX_12_4990001 chrX_4990001 RAL-802_95b 1490 chrX 5096267 5096305 chrX 5103852 5103870 springer 5 7581 0.5 2.5 1.5 2.0 7603 chrX 5096267 intron,intron CG15465 +,rg + chrX 5100068 intron,intron CG15465 +,rg + chrX 5103870 intron,intron CG15465 +,rg + chrX_5_5100001 chrX_5100001 RAL-802_95b 1491 chrX 5134790 5134825 chrX 5134906 5134946 7 119 1.5 2.0 1.8 2.5 156 chrX 5134790 intron,intron CG15465 +,rg + chrX 5134868 intron,intron CG15465 +,rg + chrX 5134946 intron,intron CG15465 +,rg + chrX_7_5130001 chrX_5130001 RAL-802_95b 1492 chrX 5350298 5350315 chrX 5350412 5350442 4 119 1.0 3.0 2.0 1.3 144 chrX 5350298 intron SK + chrX 5350370 intron SK + chrX 5350442 intron SK + chrX_4_5350001 chrX_5350001 RAL-802_95b 1493 chrX 5473574 5473619 chrX 5473670 5473715 5 90 2.0 1.0 1.5 2.0 141 chrX 5473574 intron SPR + chrX 5473644 intron SPR + chrX 5473715 intron SPR + chrX_5_5470001 chrX_5470001 RAL-802_95b 1494 chrX 5524830 5524865 chrX 5528702 5528702 412 5 3870 4.0 1.0 2.5 1.4 3872 chrX 5524830 intergenic snoRNA:Psi28S-3342 - chrX 5526766 intergenic not near genes chrX 5528702 intergenic Vsx2 - chrX_5_5525001 chrX_5525001 RAL-802_95b 1495 chrX 5883809 5883841 chrX 5884070 5884101 pogo 8 256 1.5 2.5 2.0 2.7 292 chrX 5883809 intron CR45668 - chrX 5883955 intron CR45668 - chrX 5884101 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-802_95b 1496 chrX 5884163 5884186 chrX 5884421 5884445 pogo 7 259 2.0 2.5 2.2 2.2 282 chrX 5884163 intron CR45668 - chrX 5884304 intron CR45668 - chrX 5884445 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-802_95b 1497 chrX 6171577 6171603 chrX 6179030 6179056 Quasimodo 5 7452 3.5 1.5 2.5 1.4 7479 chrX 6171577 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179056 intron Ca-alpha1T - chrX_5_6175001 chrX_6175001 RAL-802_95b 1498 chrX 6315145 6315185 chrX 6315295 6315329 6 148 5.0 0.5 2.8 1.6 184 chrX 6315145 intron CG15894 + chrX 6315237 intron CG15894 + chrX 6315329 intron CG15894 + chrX_6_6315001 chrX_6315001 RAL-802_95b 1499 chrX 6388650 6388695 chrX 6388746 6388775 7 92 2.0 4.5 3.2 1.7 125 chrX 6388650 intergenic not near genes chrX 6388712 intergenic not near genes chrX 6388775 intergenic not near genes chrX_7_6385001 chrX_6385001 RAL-802_95b 1500 chrX 6591838 6591854 chrX 6591943 6591959 6 103 3.5 0.0 1.8 2.1 121 chrX 6591838 intron Pat1 + chrX 6591898 intron Pat1 + chrX 6591959 intron Pat1 + chrX_6_6590001 chrX_6590001 RAL-802_95b 1501 chrX 6792068 6792088 chrX 6792179 6792199 4 110 0.5 0.5 0.5 2.7 131 chrX 6792068 intron C3G - chrX 6792134 intron C3G - chrX 6792199 intron C3G - chrX_4_6790001 chrX_6790001 RAL-802_95b 1502 chrX 6897689 6897707 chrX 6897799 6897837 6 126 1.5 1.5 1.5 2.4 148 chrX 6897689 intergenic not near genes chrX 6897763 intergenic not near genes chrX 6897837 intergenic not near genes chrX_6_6895001 chrX_6895001 RAL-802_95b 1503 chrX 7125248 7125267 chrX 7134427 7134446 roo 5 9176 1.0 4.5 2.8 1.3 9198 chrX 7125248 intergenic not near genes chrX 7129847 intergenic not near genes chrX 7134446 intergenic not near genes chrX_5_7125001 chrX_7125001 RAL-802_95b 1504 chrX 7702902 7702922 chrX 7703361 7703364 jockey 5 454 7.5 9.0 8.2 0.5 462 chrX 7702902 intron CHES-1-like - chrX 7703133 intron CHES-1-like - chrX 7703364 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-802_95b 1505 chrX 7737143 7737173 chrX 7737245 7737245 7 95 1.0 1.5 1.2 3.2 102 chrX 7737143 5` UTR Tom40 + chrX 7737194 intron Tom40 + chrX 7737245 intron Tom40 + chrX_7_7735001 chrX_7735001 RAL-802_95b 1506 chrX 7832416 7832436 chrX 7832524 7832545 8 104 6.0 1.0 3.5 1.8 129 chrX 7832416 intron CG1402 + chrX 7832480 intron CG1402 + chrX 7832545 intron CG1402 + chrX_8_7830001 chrX_7830001 RAL-802_95b 1507 chrX 7832438 7832459 chrX 7832522 7832568 7 96 3.5 1.0 2.2 2.2 130 chrX 7832438 intron CG1402 + chrX 7832503 intron CG1402 + chrX 7832568 intron CG1402 + chrX_7_7830001 chrX_7830001 RAL-802_95b 1508 chrX 7881837 7881873 chrX 7881941 7881975 8 101 1.5 2.0 1.8 2.9 138 chrX 7881837 intergenic Ir7f -,Ir7e - chrX 7881906 intergenic Ir7f -,Ir7e - chrX 7881975 3` UTR Ir7f - chrX_8_7880001 chrX_7880001 RAL-802_95b 1509 chrX 8513091 8513110 chrX 8513363 8513387 9 278 1.5 2.5 2.0 3.0 296 chrX 8513091 intron CG33181 + chrX 8513239 intron CG33181 + chrX 8513387 intron CG33181 + chrX_9_8510001 chrX_8510001 RAL-802_95b 1510 chrX 8726171 8726210 chrX 8726281 8726302 6 103 1.5 2.0 1.8 2.1 131 chrX 8726171 intergenic CR43297 + chrX 8726236 intergenic CR43297 + chrX 8726302 intergenic CR43297 + chrX_6_8725001 chrX_8725001 RAL-802_95b 1511 chrX 8727413 8727427 chrX 8727510 8727524 4 94 0.0 4.5 2.2 1.2 111 chrX 8727413 intergenic not near genes chrX 8727468 intergenic not near genes chrX 8727524 intergenic not near genes chrX_4_8725001 chrX_8725001 RAL-802_95b 1512 chrX 8744285 8744306 chrX 8744441 8744478 5 166 3.0 1.5 2.2 1.6 193 chrX 8744285 intergenic not near genes chrX 8744382 intergenic not near genes chrX 8744478 intergenic not near genes chrX_5_8740001 chrX_8740001 RAL-802_95b 1513 chrX 8888627 8888661 chrX 8888724 8888758 7 96 1.0 1.5 1.2 3.2 131 chrX 8888627 intron Moe - chrX 8888692 intron Moe - chrX 8888758 intron Moe - chrX_7_8885001 chrX_8885001 RAL-802_95b 1514 chrX 8894978 8894999 chrX 8895084 8895085 7 101 3.5 3.5 3.5 1.6 107 chrX 8894978 intron Moe - chrX 8895032 intron Moe - chrX 8895085 intron Moe - chrX_7_8895001 chrX_8895001 RAL-802_95b 1515 chrX 8922320 8922340 chrX 8922761 8922794 jockey 4 445 1.0 1.0 1.0 2.0 474 chrX 8922320 intron rdgA + chrX 8922557 intron rdgA + chrX 8922794 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-802_95b 1516 chrX 8948737 8948779 chrX 8956267 8956309 roo 5 7526 1.5 2.0 1.8 1.8 7572 chrX 8948737 intron rdgA + chrX 8952523 intron rdgA + chrX 8956309 intron rdgA + chrX_5_8950001 chrX_8950001 RAL-802_95b 1517 chrX 9062723 9062747 chrX 9062821 9062845 4 98 1.5 1.0 1.2 1.8 122 chrX 9062723 intron CG15365 - chrX 9062784 intron CG15365 - chrX 9062845 intron CG15365 - chrX_4_9060001 chrX_9060001 RAL-802_95b 1518 chrX 9337923 9337973 chrX 9338035 9338074 8 101 0.0 0.5 0.2 6.7 151 chrX 9337923 intron CG34449 - chrX 9337998 intron CG34449 - chrX 9338074 exon CG34449 - chrX_8_9335001 chrX_9335001 RAL-802_95b 1519 chrX 9439108 9439140 chrX 9439320 9439346 5 210 3.5 1.5 2.5 1.4 238 chrX 9439108 intron mgl - chrX 9439227 intron mgl - chrX 9439346 intron mgl - chrX_5_9435001 chrX_9435001 RAL-802_95b 1520 chrX 9508119 9508157 chrX 9509657 9509695 jockey 6 1536 3.0 0.5 1.8 2.1 1576 chrX 9508119 intron CG32700 - chrX 9508907 intron CG32700 - chrX 9509695 intron CG32700 - chrX_6_9505001 chrX_9505001 RAL-802_95b 1521 chrX 9923378 9923411 chrX 9923483 9923507 4 101 2.5 0.5 1.5 1.6 129 chrX 9923378 intergenic not near genes chrX 9923442 intergenic not near genes chrX 9923507 intergenic not near genes chrX_4_9920001 chrX_9920001 RAL-802_95b 1522 chrX 10138201 10138240 chrX 10145719 10145753 412 10 7520 2.5 3.5 3.0 2.5 7552 chrX 10138201 intron,intron RhoU +,CR44894 - chrX 10141977 intron,intron RhoU +,CR44894 - chrX 10145753 intron,intron RhoU +,CR44894 - chrX_10_10140001 chrX_10140001 RAL-802_95b 1523 chrX 10267300 10267335 chrX 10276470 10276495 roo 12 9168 0.0 4.5 2.2 3.8 9195 chrX 10267300 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276495 3` UTR alpha-Man-I - chrX_12_10270001 chrX_10270001 RAL-802_95b 1524 chrX 10317546 10317555 chrX 10317644 10317653 4 98 1.0 3.0 2.0 1.3 107 chrX 10317546 intron alpha-Man-I - chrX 10317600 intron alpha-Man-I - chrX 10317653 intron alpha-Man-I - chrX_4_10315001 chrX_10315001 RAL-802_95b 1525 chrX 10317557 10317574 chrX 10317634 10317672 11 95 1.0 2.0 1.5 4.4 115 chrX 10317557 intron alpha-Man-I - chrX 10317614 intron alpha-Man-I - chrX 10317672 intron alpha-Man-I - chrX_11_10315001 chrX_10315001 RAL-802_95b 1526 chrX 10348815 10348822 chrX 10356379 10356407 springer 4 7575 3.0 3.5 3.2 1.0 7592 chrX 10348815 intergenic snoRNA:U3:9B + chrX 10352611 intergenic not near genes chrX 10356407 intergenic l(1)G0289 - chrX_4_10350001 chrX_10350001 RAL-802_95b 1527 chrX 10453064 10453102 chrX 10453275 10453313 9 208 2.5 2.5 2.5 2.6 249 chrX 10453064 intron CG32683 - chrX 10453188 intron CG32683 - chrX 10453313 intron CG32683 - chrX_9_10450001 chrX_10450001 RAL-802_95b 1528 chrX 10811853 10811896 chrX 10811964 10811976 4 101 2.0 0.5 1.2 1.8 123 chrX 10811853 intron Imp - chrX 10811914 intron Imp - chrX 10811976 intron Imp - chrX_4_10810001 chrX_10810001 RAL-802_95b 1529 chrX 11095980 11096008 chrX 11103102 11103130 HMS-Beagle 7 7121 4.0 3.0 3.5 1.6 7150 chrX 11095980 intergenic not near genes chrX 11099555 intergenic not near genes chrX 11103130 intron CG42249 + chrX_7_11095001 chrX_11095001 RAL-802_95b 1530 chrX 11191910 11191921 chrX 11191993 11192019 4 86 1.5 4.0 2.8 1.1 109 chrX 11191910 intergenic not near genes chrX 11191964 intergenic not near genes chrX 11192019 intergenic not near genes chrX_4_11190001 chrX_11190001 RAL-802_95b 1531 chrX 11379756 11379784 chrX 11379913 11379949 8 158 2.0 2.5 2.2 2.5 193 chrX 11379756 intron dlg1 + chrX 11379852 intron dlg1 + chrX 11379949 intron dlg1 + chrX_8_11375001 chrX_11375001 RAL-802_95b 1532 chrX 11451378 11451403 chrX 11451479 11451504 5 101 0.5 3.5 2.0 1.7 126 chrX 11451378 intron Evi5 - chrX 11451441 intron Evi5 - chrX 11451504 intron Evi5 - chrX_5_11450001 chrX_11450001 RAL-802_95b 1533 chrX 11633397 11633442 chrX 11640471 11640491 297 8 7070 2.5 3.5 3.0 2.0 7094 chrX 11633397 intron Ptp10D + chrX 11636944 intron Ptp10D + chrX 11640491 intron Ptp10D + chrX_8_11635001 chrX_11635001 RAL-802_95b 1534 chrX 11643613 11643641 chrX 11643716 11643729 4 98 1.5 4.0 2.8 1.1 116 chrX 11643613 intron Ptp10D + chrX 11643671 intron Ptp10D + chrX 11643729 intron Ptp10D + chrX_4_11640001 chrX_11640001 RAL-802_95b 1535 chrX 11645107 11645140 chrX 11648296 11648314 NOF 4 3186 0.0 3.0 1.5 1.6 3207 chrX 11645107 intron Ptp10D + chrX 11646710 intron Ptp10D + chrX 11648314 intron Ptp10D + chrX_4_11645001 chrX_11645001 RAL-802_95b 1536 chrX 11804666 11804689 chrX 11804780 11804783 4 114 1.5 1.0 1.2 1.8 117 chrX 11804666 intron Hsc70-3 - chrX 11804724 intron Hsc70-3 - chrX 11804783 intron Hsc70-3 - chrX_4_11800001 chrX_11800001 RAL-802_95b 1537 chrX 12094045 12094058 chrX 12094127 12094154 4 86 3.0 3.0 3.0 1.0 109 chrX 12094045 intron,intron CR43960 +,Ten-a + chrX 12094100 intron,intron CR43960 +,Ten-a + chrX 12094154 intron,intron CR43960 +,Ten-a + chrX_4_12090001 chrX_12090001 RAL-802_95b 1538 chrX 12176717 12176761 chrX 12176813 12176857 9 91 0.5 3.5 2.0 3.0 140 chrX 12176717 intron,3` UTR Ten-a +,CG1924 - chrX 12176787 intron,3` UTR Ten-a +,CG1924 - chrX 12176857 intron,3` UTR Ten-a +,CG1924 - chrX_9_12175001 chrX_12175001 RAL-802_95b 1539 chrX 12375472 12375496 chrX 12375590 12375614 4 114 2.5 0.5 1.5 1.6 142 chrX 12375472 intergenic Ir11a - chrX 12375543 intergenic Ir11a - chrX 12375614 exon Ir11a - chrX_4_12375001 chrX_12375001 RAL-802_95b 1540 chrX 12421223 12421520 chrX 12421327 12421616 7 101 0.5 3.5 2.0 2.3 393 chrX 12421223 intergenic not near genes chrX 12421420 intergenic not near genes chrX 12421616 intergenic not near genes chrX_7_12420001 chrX_12420001 RAL-802_95b 1541 chrX 12465468 12465491 chrX 12465558 12465577 6 93 0.5 0.0 0.2 5.0 109 chrX 12465468 exon CG42258 + chrX 12465522 intron CG42258 + chrX 12465577 intron CG42258 + chrX_6_12465001 chrX_12465001 RAL-802_95b 1542 chrX 12557479 12557481 chrX 12557564 12557582 4 93 0.0 0.0 0.0 4.0 103 chrX 12557479 intron CG43921 - chrX 12557530 intron CG43921 - chrX 12557582 intron CG43921 - chrX_4_12555001 chrX_12555001 RAL-802_95b 1543 chrX 12785427 12785459 chrX 12785524 12785556 4 97 2.0 6.0 4.0 0.8 129 chrX 12785427 intergenic Pde9 -,CG32647 - chrX 12785492 intergenic Pde9 - chrX 12785556 intergenic Pde9 - chrX_4_12785001 chrX_12785001 RAL-802_95b 1544 chrX 12930580 12930605 chrX 12937716 12937736 HMS-Beagle 6 7135 3.5 3.5 3.5 1.3 7156 chrX 12930580 intron fne + chrX 12934158 intron fne + chrX 12937736 intron fne + chrX_6_12930001 chrX_12930001 RAL-802_95b 1545 chrX 12960750 12960798 chrX 12960846 12960899 12 99 2.5 2.0 2.2 3.8 149 chrX 12960750 3` UTR CG32642 + chrX 12960824 intergenic CG32642 + chrX 12960899 intergenic CG32642 + chrX_12_12960001 chrX_12960001 RAL-802_95b 1546 chrX 13146579 13146593 chrX 13146687 13146701 5 108 6.5 2.5 4.5 0.9 122 chrX 13146579 intron CG32645 + chrX 13146640 intron CG32645 + chrX 13146701 intron CG32645 + chrX_5_13145001 chrX_13145001 RAL-802_95b 1547 chrX 13172343 13172380 chrX 13172439 13172471 6 90 1.0 1.5 1.2 2.7 128 chrX 13172343 exon CG34411 - chrX 13172407 intron CG34411 - chrX 13172471 intron CG34411 - chrX_6_13170001 chrX_13170001 RAL-802_95b 1548 chrX 13401469 13401514 chrX 13401836 13401886 jockey 13 370 2.5 3.0 2.8 3.4 417 chrX 13401469 intergenic CG1673 +,CG12725 - chrX 13401678 intergenic CG12725 -,CG1673 + chrX 13401886 3` UTR CG12725 - chrX_13_13400001 chrX_13400001 RAL-802_95b 1549 chrX 13429458 13429491 chrX 13430612 13430649 jockey 5 1164 3.5 2.5 3.0 1.2 1191 chrX 13429458 intergenic not near genes chrX 13430054 intergenic not near genes chrX 13430649 intergenic not near genes chrX_5_13430001 chrX_13430001 RAL-802_95b 1550 chrX 13463636 13463667 chrX 13469223 13469249 mdg3 5 5589 3.5 4.0 3.8 1.0 5613 chrX 13463636 intron Neto + chrX 13466442 intron Neto + chrX 13469249 intron Neto + chrX_5_13465001 chrX_13465001 RAL-802_95b 1551 chrX 13593201 13593226 chrX 13593301 13593326 4 100 1.5 0.5 1.0 2.0 125 chrX 13593201 3` UTR Tango13 + chrX 13593264 intergenic Tango13 +,up - chrX 13593326 intergenic Tango13 +,up - chrX_4_13590001 chrX_13590001 RAL-802_95b 1552 chrX 13708761 13708816 chrX 13709965 13710015 11 1198 5.5 3.5 4.5 2.0 1254 chrX 13708761 intron,intron CG9940 -,NnaD + chrX 13709388 intron,intron CG9940 -,NnaD + chrX 13710015 intron,exon CG9940 -,NnaD + chrX_11_13705001 chrX_13705001 RAL-802_95b 1553 chrX 13708727 13708768 chrX 13710053 13710094 6 1333 10.5 9.0 9.8 0.6 1367 chrX 13708727 intron,intron CG9940 -,NnaD + chrX 13709410 intron,exon CG9940 -,NnaD + chrX 13710094 intron,exon CG9940 -,NnaD + chrX_6_13705001 chrX_13705001 RAL-802_95b 1554 chrX 13843377 13843403 chrX 13843550 13843559 4 165 2.0 1.0 1.5 1.6 182 chrX 13843377 intron AMPdeam - chrX 13843468 intron AMPdeam - chrX 13843559 intron AMPdeam - chrX_4_13840001 chrX_13840001 RAL-802_95b 1555 chrX 13943271 13943303 chrX 13943382 13943414 6 108 0.5 0.5 0.5 4.0 143 chrX 13943271 intron mamo - chrX 13943342 intron mamo - chrX 13943414 intron mamo - chrX_6_13940001 chrX_13940001 RAL-802_95b 1556 chrX 13057297 13057304 chrX 13966949 13966949 5 909648 7.0 4.5 5.8 0.7 909652 chrX 13057297 intron rad + chrX 13512123 intron Neto + chrX 13966949 intron mamo - chrX_5_13510001 chrX_13510001 RAL-802_95b 1557 chrX 14064139 14064172 chrX 14064256 14064289 5 117 0.0 0.0 0.0 5.0 150 chrX 14064139 intergenic not near genes chrX 14064214 intergenic not near genes chrX 14064289 intergenic not near genes chrX_5_14060001 chrX_14060001 RAL-802_95b 1558 chrX 14407262 14407300 chrX 14407348 14407402 4 96 0.5 2.5 1.5 1.6 140 chrX 14407262 intron dpr8 + chrX 14407332 intron dpr8 + chrX 14407402 intron dpr8 + chrX_4_14405001 chrX_14405001 RAL-802_95b 1559 chrX 14411262 14411283 chrX 14411347 14411369 4 92 2.5 1.0 1.8 1.4 107 chrX 14411262 intron dpr8 + chrX 14411316 intron dpr8 + chrX 14411369 intron dpr8 + chrX_4_14410001 chrX_14410001 RAL-802_95b 1560 chrX 14416294 14416332 chrX 14421081 14421109 F-element 8 4784 2.5 3.0 2.8 2.1 4815 chrX 14416294 intron dpr8 + chrX 14418702 intron dpr8 + chrX 14421109 intron dpr8 + chrX_8_14415001 chrX_14415001 RAL-802_95b 1561 chrX 14503516 14503564 chrX 14503641 14503689 7 124 1.5 2.0 1.8 2.5 173 chrX 14503516 intergenic not near genes chrX 14503602 intergenic not near genes chrX 14503689 intergenic not near genes chrX_7_14500001 chrX_14500001 RAL-802_95b 1562 chrX 14778027 14778051 chrX 14782844 14782868 Doc 9 4817 1.5 6.5 4.0 1.8 4841 chrX 14778027 intergenic CG5347 + chrX 14780448 intergenic not near genes chrX 14782868 intergenic Ag5r2 - chrX_9_14780001 chrX_14780001 RAL-802_95b 1563 chrX 14869883 14869928 chrX 14870045 14870090 13 158 6.0 1.5 3.8 2.7 207 chrX 14869883 intron,intron Flo2 +,CG9518 - chrX 14869986 intron,intron Flo2 +,CG9518 - chrX 14870090 intron,intron Flo2 +,CG9518 - chrX_13_14865001 chrX_14865001 RAL-802_95b 1564 chrX 14936844 14936890 chrX 14946118 14946126 roo 16 9272 4.5 1.5 3.0 4.0 9282 chrX 14936844 intron pdgy - chrX 14941485 intron pdgy - chrX 14946126 intron pdgy - chrX_16_14940001 chrX_14940001 RAL-802_95b 1565 chrX 14960374 14960416 chrX 14960535 14960577 12 161 6.0 3.5 4.8 2.1 203 chrX 14960374 intron eag + chrX 14960476 intron eag + chrX 14960577 intron eag + chrX_12_14960001 chrX_14960001 RAL-802_95b 1566 chrX 15277616 15277655 chrX 15277720 15277744 4 101 2.0 1.0 1.5 1.6 128 chrX 15277616 intergenic not near genes chrX 15277680 intergenic not near genes chrX 15277744 intergenic not near genes chrX_4_15275001 chrX_15275001 RAL-802_95b 1567 chrX 15358288 15358338 chrX 15358396 15358441 12 101 4.5 1.0 2.8 3.2 153 chrX 15358288 intron acj6 - chrX 15358364 intron acj6 - chrX 15358441 intron acj6 - chrX_12_15355001 chrX_15355001 RAL-802_95b 1568 chrX 15369809 15369860 chrX 15369912 15369945 5 96 1.5 5.5 3.5 1.1 136 chrX 15369809 intron acj6 - chrX 15369877 intron acj6 - chrX 15369945 intron acj6 - chrX_5_15365001 chrX_15365001 RAL-802_95b 1569 chrX 15421908 15421940 chrX 15423439 15423471 pogo 5 1529 1.0 6.0 3.5 1.1 1563 chrX 15421908 intron Cngl - chrX 15422690 intron Cngl - chrX 15423471 intron Cngl - chrX_5_15420001 chrX_15420001 RAL-802_95b 1570 chrX 15497587 15497604 chrX 15497697 15497714 4 103 2.5 1.0 1.8 1.4 127 chrX 15497587 intron,3` UTR Gmap +,CR44888 - chrX 15497650 intron,3` UTR Gmap +,CR44888 - chrX 15497714 intron,3` UTR Gmap +,CR44888 - chrX_4_15495001 chrX_15495001 RAL-802_95b 1571 chrX 15565614 15565664 chrX 15565720 15565752 8 101 4.0 4.0 4.0 1.6 138 chrX 15565614 intergenic not near genes chrX 15565683 intergenic not near genes chrX 15565752 intergenic not near genes chrX_8_15565001 chrX_15565001 RAL-802_95b 1572 chrX 4275590 4275590 chrX 15627327 15627327 5 11351737 4.5 11.0 7.8 0.6 11351737 chrX 4275590 3` UTR CR45483 - chrX 9951458 intergenic not near genes chrX 15627327 intron sog - chrX_5_9950001 chrX_9950001 RAL-802_95b 1573 chrX 15681396 15681422 chrX 15681477 15681512 6 88 0.5 2.5 1.5 2.4 116 chrX 15681396 intergenic not near genes chrX 15681454 intergenic not near genes chrX 15681512 intergenic not near genes chrX_6_15680001 chrX_15680001 RAL-802_95b 1574 chrX 15898434 15898447 chrX 15898603 15898618 4 172 4.5 4.5 4.5 0.7 184 chrX 15898434 intron shi + chrX 15898526 intron shi + chrX 15898618 intron shi + chrX_4_15895001 chrX_15895001 RAL-802_95b 1575 chrX 15959535 15959558 chrX 15959628 15959666 5 105 1.5 1.0 1.2 2.3 131 chrX 15959535 intron mmd - chrX 15959600 intron mmd - chrX 15959666 intron mmd - chrX_5_15955001 chrX_15955001 RAL-802_95b 1576 chrX 16074125 16074148 chrX 16074481 16074504 4 356 1.5 3.0 2.2 1.2 379 chrX 16074125 intergenic not near genes chrX 16074314 intergenic Tob - chrX 16074504 intergenic Tob - chrX_4_16070001 chrX_16070001 RAL-802_95b 1577 chrX 16222781 16222790 chrX 16231151 16231160 roo 4 8370 3.5 7.0 5.2 0.6 8379 chrX 16222781 intergenic not near genes chrX 16226970 intergenic not near genes chrX 16231160 intergenic not near genes chrX_4_16225001 chrX_16225001 RAL-802_95b 1578 chrX 16295526 16295548 chrX 16295610 16295637 5 94 3.0 0.0 1.5 2.0 111 chrX 16295526 intron CG9911 - chrX 16295582 intron CG9911 - chrX 16295637 intron CG9911 - chrX_5_16295001 chrX_16295001 RAL-802_95b 1579 chrX 16340652 16340698 chrX 16349827 16349839 roo 5 9169 0.0 5.0 2.5 1.4 9187 chrX 16340652 intergenic Dsp1 + chrX 16345246 intergenic not near genes chrX 16349839 intergenic sl + chrX_5_16345001 chrX_16345001 RAL-802_95b 1580 chrX 16437588 16437640 chrX 16437695 16437748 7 102 2.5 2.5 2.5 2.0 160 chrX 16437588 3` UTR,3` UTR hang +,CG9947 - chrX 16437668 3` UTR,3` UTR hang +,CG9947 - chrX 16437748 3` UTR,3` UTR hang +,CG9947 - chrX_7_16435001 chrX_16435001 RAL-802_95b 1581 chrX 16492648 16492659 chrX 16498229 16498256 mdg3 4 5593 2.0 3.5 2.8 1.1 5608 chrX 16492648 intron para - chrX 16495452 intron para - chrX 16498256 intron para - chrX_4_16495001 chrX_16495001 RAL-802_95b 1582 chrX 16505846 16505872 chrX 16505948 16505958 6 98 3.5 1.0 2.2 1.9 112 chrX 16505846 intron para - chrX 16505902 intron para - chrX 16505958 intron para - chrX_6_16505001 chrX_16505001 RAL-802_95b 1583 chrX 16650936 16650956 chrX 16651004 16651013 5 68 1.5 0.0 0.8 2.8 77 chrX 16650936 intergenic CG32573 +,CG42512 + chrX 16650974 intergenic CG32573 +,CG42512 + chrX 16651013 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 RAL-802_95b 1584 chrX 16821223 16821250 chrX 16821322 16821344 6 99 5.0 5.0 5.0 1.0 121 chrX 16821223 intron CG4829 + chrX 16821284 intron CG4829 + chrX 16821344 intron CG4829 + chrX_6_16820001 chrX_16820001 RAL-802_95b 1585 chrX 16870063 16870097 chrX 16870165 16870195 4 101 2.0 1.5 1.8 1.4 132 chrX 16870063 intron CG13003 - chrX 16870129 intron CG13003 - chrX 16870195 intron CG13003 - chrX_4_16870001 chrX_16870001 RAL-802_95b 1586 chrX 17061561 17061599 chrX 17061694 17061732 4 132 2.0 0.5 1.2 1.8 171 chrX 17061561 intron CG45002 - chrX 17061646 intron CG45002 - chrX 17061732 intron CG45002 - chrX_4_17060001 chrX_17060001 RAL-802_95b 1587 chrX 17205829 17205858 chrX 17205939 17205968 5 110 3.5 2.0 2.8 1.3 139 chrX 17205829 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205968 intergenic CG32564 + chrX_5_17205001 chrX_17205001 RAL-802_95b 1588 chrX 17221810 17221848 chrX 17221916 17221954 10 104 6.0 5.5 5.8 1.5 144 chrX 17221810 intron CG5172 + chrX 17221882 intron CG5172 + chrX 17221954 intron CG5172 + chrX_10_17220001 chrX_17220001 RAL-802_95b 1589 chrX 17229938 17230180 chrX 17230061 17230279 9 113 2.5 3.5 3.0 2.2 341 chrX 17229938 intergenic CG10597 - chrX 17230108 intergenic CG10597 - chrX 17230279 3` UTR CG10597 - chrX_9_17230001 chrX_17230001 RAL-802_95b 1590 chrX 17290057 17290097 chrX 17290143 17290193 7 94 1.0 1.5 1.2 3.2 136 chrX 17290057 intron,intron CG5445 +,Fim - chrX 17290125 intron,intron CG5445 +,Fim - chrX 17290193 intron,intron CG5445 +,Fim - chrX_7_17290001 chrX_17290001 RAL-802_95b 1591 chrX 17352576 17352613 chrX 17352690 17352736 10 120 0.0 2.5 1.2 4.5 160 chrX 17352576 intergenic not near genes chrX 17352656 intergenic not near genes chrX 17352736 intergenic not near genes chrX_10_17350001 chrX_17350001 RAL-802_95b 1592 chrX 17434413 17434426 chrX 17434526 17434539 5 113 0.0 0.0 0.0 5.0 126 chrX 17434413 intron CG12994 - chrX 17434476 intron CG12994 - chrX 17434539 intron CG12994 - chrX_5_17430001 chrX_17430001 RAL-802_95b 1593 chrX 17435732 17435765 chrX 17435828 17435861 10 94 4.5 2.5 3.5 2.2 129 chrX 17435732 intron CG12994 - chrX 17435796 intron CG12994 - chrX 17435861 intron CG12994 - chrX_10_17435001 chrX_17435001 RAL-802_95b 1594 chrX 17502333 17502371 chrX 17502433 17502443 6 92 3.0 2.0 2.5 1.7 110 chrX 17502333 intron CG43658 - chrX 17502388 intron CG43658 - chrX 17502443 intron CG43658 - chrX_6_17500001 chrX_17500001 RAL-802_95b 1595 chrX 17546959 17546997 chrX 17547112 17547150 6 151 2.5 4.5 3.5 1.3 191 chrX 17546959 intron CG43658 - chrX 17547054 intron CG43658 - chrX 17547150 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-802_95b 1596 chrX 17680879 17680894 chrX 17680976 17680990 4 96 3.0 1.5 2.2 1.2 111 chrX 17680879 intron chas - chrX 17680934 intron chas - chrX 17680990 intron chas - chrX_4_17680001 chrX_17680001 RAL-802_95b 1597 chrX 17708814 17708853 chrX 17708911 17708937 7 94 1.5 2.0 1.8 2.5 123 chrX 17708814 intron CG8173 - chrX 17708876 intron CG8173 - chrX 17708937 intron CG8173 - chrX_7_17705001 chrX_17705001 RAL-802_95b 1598 chrX 17911841 17911863 chrX 17911949 17911956 7 101 1.0 1.0 1.0 3.5 115 chrX 17911841 intron CG6847 + chrX 17911898 intron CG6847 + chrX 17911956 intron CG6847 + chrX_7_17910001 chrX_17910001 RAL-802_95b 1599 chrX 17968902 17968925 chrX 17969040 17969058 4 133 2.0 5.0 3.5 0.9 156 chrX 17968902 intron Sh - chrX 17968980 intron Sh - chrX 17969058 intron Sh - chrX_4_17965001 chrX_17965001 RAL-802_95b 1600 chrX 18194049 18194067 chrX 18194604 18194614 BS 4 552 6.0 0.5 3.2 1.0 565 chrX 18194049 intron Frq2 + chrX 18194332 intron Frq2 + chrX 18194614 intron Frq2 + chrX_4_18190001 chrX_18190001 RAL-802_95b 1601 chrX 18194069 18194085 chrX 18194602 18194639 BS 4 543 5.0 0.5 2.8 1.1 570 chrX 18194069 intron Frq2 + chrX 18194354 intron Frq2 + chrX 18194639 intron Frq2 + chrX_4_18190001 chrX_18190001 RAL-802_95b 1602 chrX 18320491 18320499 chrX 18320643 18320651 6 152 0.0 2.0 1.0 3.0 160 chrX 18320491 intron CG6023 - chrX 18320571 intron CG6023 - chrX 18320651 intron CG6023 - chrX_6_18320001 chrX_18320001 RAL-802_95b 1603 chrX 18429478 18429516 chrX 18434809 18434831 Transpac 5 5327 3.5 4.0 3.8 1.0 5353 chrX 18429478 intergenic not near genes chrX 18432154 intergenic not near genes chrX 18434831 intergenic not near genes chrX_5_18430001 chrX_18430001 RAL-802_95b 1604 chrX 18467240 18467255 chrX 18467400 18467414 6 163 1.0 1.0 1.0 3.0 174 chrX 18467240 intron CG32547 - chrX 18467327 intron CG32547 - chrX 18467414 intron CG32547 - chrX_6_18465001 chrX_18465001 RAL-802_95b 1605 chrX 18558775 18558807 chrX 18558865 18558909 6 93 0.0 1.0 0.5 4.0 134 chrX 18558775 intron Bx + chrX 18558842 intron Bx + chrX 18558909 intron Bx + chrX_6_18555001 chrX_18555001 RAL-802_95b 1606 chrX 18645005 18645040 chrX 18645115 18645158 6 114 1.0 1.5 1.2 2.7 153 chrX 18645005 intron Rip11 - chrX 18645082 intron Rip11 - chrX 18645158 intron Rip11 - chrX_6_18645001 chrX_18645001 RAL-802_95b 1607 chrX 18671208 18671250 chrX 18671304 18671347 7 100 1.5 1.5 1.5 2.8 139 chrX 18671208 intergenic not near genes chrX 18671278 intergenic not near genes chrX 18671347 intergenic not near genes chrX_7_18670001 chrX_18670001 RAL-802_95b 1608 chrX 18896505 18896525 chrX 18896636 18896641 4 127 3.0 0.0 1.5 1.6 136 chrX 18896505 3` UTR CG7349 + chrX 18896573 3` UTR CG7349 + chrX 18896641 intergenic CG7349 + chrX_4_18895001 chrX_18895001 RAL-802_95b 1609 chrX 18947505 18947521 chrX 18947618 18947626 4 111 2.5 7.0 4.8 0.7 121 chrX 18947505 intron CG43759 + chrX 18947566 intron CG43759 + chrX 18947626 intron CG43759 + chrX_4_18945001 chrX_18945001 RAL-802_95b 1610 chrX 19020595 19020608 chrX 19020693 19020706 4 98 0.0 4.0 2.0 1.3 111 chrX 19020595 intron CG43759 + chrX 19020650 intron CG43759 + chrX 19020706 intron CG43759 + chrX_4_19020001 chrX_19020001 RAL-802_95b 1611 chrX 19020609 19020623 chrX 19020682 19020700 5 83 0.0 3.5 1.8 1.8 91 chrX 19020609 intron CG43759 + chrX 19020654 intron CG43759 + chrX 19020700 intron CG43759 + chrX_5_19020001 chrX_19020001 RAL-802_95b 1612 chrX 19060421 19060436 chrX 19065225 19065230 Doc 4 4802 1.5 1.0 1.2 1.8 4809 chrX 19060421 intron CG14190 + chrX 19062826 intron CG14190 + chrX 19065230 intron CG14190 + chrX_4_19060001 chrX_19060001 RAL-802_95b 1613 chrX 19073675 19073694 chrX 19073772 19073786 4 101 4.5 0.5 2.5 1.1 111 chrX 19073675 intergenic not near genes chrX 19073730 intergenic not near genes chrX 19073786 intergenic not near genes chrX_4_19070001 chrX_19070001 RAL-802_95b 1614 chrX 19109114 19109130 chrX 19109291 19109319 4 183 0.0 0.0 0.0 4.0 205 chrX 19109114 intergenic not near genes chrX 19109216 intergenic not near genes chrX 19109319 intergenic not near genes chrX_4_19105001 chrX_19105001 RAL-802_95b 1615 chrX 19119679 19119716 chrX 19119784 19119822 6 105 3.5 1.0 2.2 1.9 143 chrX 19119679 intergenic not near genes chrX 19119750 intergenic not near genes chrX 19119822 intergenic not near genes chrX_6_19115001 chrX_19115001 RAL-802_95b 1616 chrX 19124442 19124462 chrX 19124550 19124571 4 108 0.5 3.5 2.0 1.3 129 chrX 19124442 intergenic CG15882 - chrX 19124506 intergenic CG15882 -,tgy - chrX 19124571 intergenic CG15882 -,tgy - chrX_4_19120001 chrX_19120001 RAL-802_95b 1617 chrX 19339730 19339769 chrX 19339826 19339865 11 95 0.0 2.0 1.0 5.5 135 chrX 19339730 intron nAChRalpha7 - chrX 19339798 intron nAChRalpha7 - chrX 19339865 intron nAChRalpha7 - chrX_11_19335001 chrX_19335001 RAL-802_95b 1618 chrX 19352456 19352496 chrX 19370485 19370521 5 18026 13.0 2.5 7.8 0.6 18065 chrX 19352456 intergenic not near genes chrX 19361488 intron kek5 + chrX 19370521 intron kek5 + chrX_5_19360001 chrX_19360001 RAL-802_95b 1619 chrX 19356968 19357019 chrX 19358429 19358498 NOF 9 1463 2.0 0.5 1.2 4.1 1530 chrX 19356968 intron kek5 + chrX 19357733 intron kek5 + chrX 19358498 intron kek5 + chrX_9_19355001 chrX_19355001 RAL-802_95b 1620 chrX 19472122 19472154 chrX 19472691 19472728 jockey 4 564 1.0 3.0 2.0 1.3 606 chrX 19472122 intergenic kek5 + chrX 19472425 intergenic not near genes chrX 19472728 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-802_95b 1621 chrX 19500544 19500746 chrX 19500641 19500838 20 97 2.5 2.0 2.2 6.2 294 chrX 19500544 intron,intron CG14200 +,Pfrx + chrX 19500691 intron,intron CG14200 +,Pfrx + chrX 19500838 intron,intron CG14200 +,Pfrx + chrX_20_19500001 chrX_19500001 RAL-802_95b 1622 chrX 19689388 19689437 chrX 19689486 19689522 12 94 5.0 5.0 5.0 2.0 134 chrX 19689388 intergenic Mer -,CG14227 - chrX 19689455 intergenic Mer - chrX 19689522 intergenic Mer - chrX_12_19685001 chrX_19685001 RAL-802_95b 1623 chrX 19693735 19693782 chrX 19693840 19693876 12 102 2.5 0.0 1.2 5.5 141 chrX 19693735 intergenic Mer -,CG14229 - chrX 19693806 intergenic CG14229 -,Mer - chrX 19693876 intergenic CG14229 -,Mer - chrX_12_19690001 chrX_19690001 RAL-802_95b 1624 chrX 19880382 19880393 chrX 19880521 19880521 6 137 3.5 3.0 3.2 1.4 139 chrX 19880382 intron Hers + chrX 19880452 intron Hers + chrX 19880521 intron Hers + chrX_6_19880001 chrX_19880001 RAL-802_95b 1625 chrX 19983520 19983531 chrX 19983688 19983690 4 171 0.5 0.0 0.2 3.3 170 chrX 19983520 intergenic not near genes chrX 19983605 intergenic not near genes chrX 19983690 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-802_95b 1626 chrX 20123024 20123062 chrX 20123161 20123174 6 133 2.5 2.0 2.2 1.9 150 chrX 20123024 intron CG34331 + chrX 20123099 intron CG34331 + chrX 20123174 intron CG34331 + chrX_6_20120001 chrX_20120001 RAL-802_95b 1627 chrX 20312870 20312895 chrX 20312968 20312988 5 91 2.0 2.5 2.2 1.6 118 chrX 20312870 intron CG1504 - chrX 20312929 intron CG1504 - chrX 20312988 intron CG1504 - chrX_5_20310001 chrX_20310001 RAL-802_95b 1628 chrX 20362854 20362880 chrX 20362951 20362977 6 92 0.5 0.0 0.2 5.0 123 chrX 20362854 intergenic not near genes chrX 20362916 intergenic not near genes chrX 20362977 intergenic not near genes chrX_6_20360001 chrX_20360001 RAL-802_95b 1629 chrX 20484378 20484404 chrX 20484497 20484508 7 120 2.5 2.0 2.2 2.2 130 chrX 20484378 intron RhoGAP19D - chrX 20484443 intron RhoGAP19D - chrX 20484508 intron RhoGAP19D - chrX_7_20480001 chrX_20480001 RAL-802_95b 1630 chrX 20493915 20493926 chrX 20494086 20494107 4 177 0.0 9.5 4.8 0.7 192 chrX 20493915 intron RhoGAP19D - chrX 20494011 intron RhoGAP19D - chrX 20494107 intron RhoGAP19D - chrX_4_20490001 chrX_20490001 RAL-802_95b 1631 chrX 20559114 20559158 chrX 20559217 20559266 7 101 0.5 3.5 2.0 2.3 152 chrX 20559114 intron RunxB + chrX 20559190 intron RunxB + chrX 20559266 intron RunxB + chrX_7_20555001 chrX_20555001 RAL-802_95b 1632 chrX 20635416 20635446 chrX 20635602 20635632 5 183 1.5 4.5 3.0 1.2 216 chrX 20635416 intergenic not near genes chrX 20635524 intergenic not near genes chrX 20635632 intergenic not near genes chrX_5_20635001 chrX_20635001 RAL-802_95b 1633 chrX 20940710 20940745 chrX 20942199 20942224 hobo 6 1487 2.5 2.0 2.2 1.9 1514 chrX 20940710 intergenic not near genes chrX 20941467 intergenic not near genes chrX 20942224 intergenic not near genes chrX_6_20940001 chrX_20940001 RAL-802_95b 1634 chrX 20981005 20981031 chrX 20981128 20981154 5 122 3.5 1.0 2.2 1.6 149 chrX 20981005 intergenic not near genes chrX 20981080 intergenic not near genes chrX 20981154 intergenic not near genes chrX_5_20980001 chrX_20980001 RAL-802_95b 1635 chrX 21029786 21029800 chrX 21029947 21029959 6 160 2.0 2.5 2.2 1.9 173 chrX 21029786 3` UTR CG1529 - chrX 21029872 3` UTR CG1529 - chrX 21029959 3` UTR CG1529 - chrX_6_21025001 chrX_21025001 RAL-802_95b 1636 chrX 21061849 21061897 chrX 21062348 21062392 roo 4 498 3.0 3.5 3.2 1.0 543 chrX 21061849 intron bves + chrX 21062120 intron bves + chrX 21062392 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 RAL-802_95b 1637 chrX 21086139 21086161 chrX 21087178 21087210 jockey 4 1046 2.5 7.5 5.0 0.7 1071 chrX 21086139 intergenic not near genes chrX 21086674 intergenic not near genes chrX 21087210 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-802_95b 1638 chrX 21088037 21088067 chrX 21088178 21088188 5 133 6.5 0.5 3.5 1.1 151 chrX 21088037 intergenic not near genes chrX 21088112 intergenic not near genes chrX 21088188 intergenic not near genes chrX_5_21085001 chrX_21085001 RAL-802_95b 1639 chrX 21328106 21328146 chrX 21328237 21328276 13 130 2.0 3.0 2.5 3.7 170 chrX 21328106 3` UTR CG1486 + chrX 21328191 intergenic CG1486 +,tty - chrX 21328276 intergenic CG1486 +,tty - chrX_13_21325001 chrX_21325001 RAL-802_95b 1640 chrX 21334351 21334370 chrX 21334441 21334495 6 113 0.5 1.5 1.0 3.0 144 chrX 21334351 intron tty - chrX 21334423 intron tty - chrX 21334495 intron tty - chrX_6_21330001 chrX_21330001 RAL-802_95b 1641 chrX 21358055 21358095 chrX 21358155 21358195 8 98 3.0 2.0 2.5 2.3 140 chrX 21358055 intergenic sol +,Sep1 + chrX 21358125 intergenic Sep1 +,sol + chrX 21358195 intergenic Sep1 +,sol + chrX_8_21355001 chrX_21355001 RAL-802_95b 1642 chrX 21398863 21398905 chrX 21398960 21399002 4 97 3.0 3.0 3.0 1.0 139 chrX 21398863 intergenic not near genes chrX 21398932 intergenic not near genes chrX 21399002 intergenic not near genes chrX_4_21395001 chrX_21395001 RAL-802_95b 1643 chrX 21410469 21410502 chrX 21410572 21410589 4 97 0.0 0.0 0.0 4.0 120 chrX 21410469 3` UTR CR45003 - chrX 21410529 3` UTR CR45003 - chrX 21410589 intergenic CR45003 - chrX_4_21410001 chrX_21410001 RAL-802_95b 1644 chrX 21439523 21439569 chrX 21439624 21439670 7 99 1.5 2.0 1.8 2.5 147 chrX 21439523 intron CG42343 - chrX 21439596 intron CG42343 - chrX 21439670 intron CG42343 - chrX_7_21435001 chrX_21435001 RAL-802_95b 1645 chrX 21455211 21455245 chrX 21455400 21455442 4 199 1.5 0.0 0.8 2.2 231 chrX 21455211 intron CG42343 - chrX 21455326 intron CG42343 - chrX 21455442 intron CG42343 - chrX_4_21455001 chrX_21455001 RAL-802_95b 1646 chrX 21458686 21458723 chrX 21464142 21464163 Ivk 5 5447 3.5 3.5 3.5 1.1 5477 chrX 21458686 intergenic not near genes chrX 21461424 intergenic not near genes chrX 21464163 intergenic not near genes chrX_5_21460001 chrX_21460001 RAL-802_95b 1647 chrX 21565415 21565441 chrX 21565498 21565499 4 79 0.5 1.5 1.0 2.0 84 chrX 21565415 intergenic not near genes chrX 21565457 intergenic not near genes chrX 21565499 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-802_95b 1648 chrX 21581116 21581149 chrX 21581216 21581233 4 96 1.0 2.0 1.5 1.6 117 chrX 21581116 intergenic not near genes chrX 21581174 intergenic not near genes chrX 21581233 intergenic not near genes chrX_4_21580001 chrX_21580001 RAL-802_95b 1649 chrX 21668245 21668285 chrX 21668350 21668390 5 104 1.5 1.0 1.2 2.3 145 chrX 21668245 intergenic not near genes chrX 21668318 intergenic not near genes chrX 21668390 intergenic not near genes chrX_5_21665001 chrX_21665001 RAL-802_95b 1650 chrX 22448253 22448293 chrX 22448412 22448425 5 154 2.5 1.5 2.0 1.7 172 chrX 22448253 intron CG14615 - chrX 22448339 intron CG14615 - chrX 22448425 intron CG14615 - chrX_5_22445001 chrX_22445001 RAL-802_95b 1651 chrX 22478885 22478897 chrX 22479038 22479050 4 153 0.0 1.5 0.8 2.2 165 chrX 22478885 intron CG12576 - chrX 22478968 intron CG12576 - chrX 22479050 intron CG12576 - chrX_4_22475001 chrX_22475001 RAL-802_95b 1652 chrX 22522634 22522656 chrX 22525454 22525481 NOF 7 2834 2.5 4.0 3.2 1.7 2847 chrX 22522634 intron CG17600 + chrX 22524058 intron CG17600 + chrX 22525481 intron CG17600 + chrX_7_22520001 chrX_22520001 RAL-802_95b 1653 chrX 22574806 22574822 chrX 22575060 22575077 4 255 2.0 3.5 2.8 1.1 271 chrX 22574806 intergenic not near genes chrX 22574942 intergenic not near genes chrX 22575077 intergenic not near genes chrX_4_22570001 chrX_22570001 RAL-802_95b 1654 chrX 22620494 22620508 chrX 22626768 22626792 297 4 6280 4.0 1.5 2.8 1.1 6298 chrX 22620494 intron Cda4 - chrX 22623643 intron Cda4 - chrX 22626792 intron Cda4 - chrX_4_22620001 chrX_22620001 RAL-802_95b 1655 chrX 22660577 22660604 chrX 22660681 22660708 6 103 2.0 2.0 2.0 2.0 131 chrX 22660577 intron CR44997 + chrX 22660642 intron CR44997 + chrX 22660708 intron CR44997 + chrX_6_22660001 chrX_22660001 RAL-802_95b 1656 chrX 22677278 22677327 chrX 22677505 22677548 5 227 0.5 0.0 0.2 4.2 270 chrX 22677278 intron CR44997 + chrX 22677413 intron CR44997 + chrX 22677548 intron CR44997 + chrX_5_22675001 chrX_22675001 RAL-802_95b 1657 chrX 22694306 22694309 chrX 22694416 22694419 4 110 2.0 0.0 1.0 2.0 113 chrX 22694306 intron CR44997 + chrX 22694362 intron CR44997 + chrX 22694419 intron CR44997 + chrX_4_22690001 chrX_22690001 RAL-802_95b 1658 chrX 22764358 22764392 chrX 22764474 22764483 10 112 3.0 1.5 2.2 3.1 125 chrX 22764358 intron CR44997 + chrX 22764420 intron CR44997 + chrX 22764483 intron CR44997 + chrX_10_22760001 chrX_22760001 RAL-802_95b 1659 chrX 22811980 22812003 chrX 22816773 22816791 F-element 6 4792 5.5 2.5 4.0 1.2 4811 chrX 22811980 intergenic CG12446 - chrX 22814386 intergenic not near genes chrX 22816791 intergenic not near genes chrX_6_22810001 chrX_22810001 RAL-802_95b 1660 chrX 22824223 22824438 chrX 22824355 22824591 11 145 3.0 5.0 4.0 2.2 368 chrX 22824223 intergenic fog - chrX 22824407 3` UTR fog - chrX 22824591 3` UTR fog - chrX_11_22820001 chrX_22820001 RAL-802_95b 1661 chrX 22987102 22987126 chrX 22989781 22989805 Burdock 4 2675 1.0 2.5 1.8 1.4 2703 chrX 22987102 intron,intron stnA -,stnB - chrX 22988454 intron,intron stnA -,stnB - chrX 22989805 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-802_95b 1662 chrX 22996297 22996339 chrX 23003545 23003553 roo 4 7241 1.0 2.5 1.8 1.4 7256 chrX 22996297 intron,intron stnA -,stnB - chrX 22999925 intron,intron stnA -,stnB - chrX 23003553 intron,intron stnA -,stnB - chrX_4_22995001 chrX_22995001 RAL-802_95b 1663 chrY 104705 104718 chrY 104791 104844 4 116 0.5 1.0 0.8 2.2 139 chrY 104705 intron kl-5 - chrY 104774 intron kl-5 - chrY 104844 intron kl-5 - chrY_4_100001 chrY_100001 RAL-802_95b