SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 8112 8135 chr2L 9255 9278 6 1143 18.5 36.5 27.5 0.2 1166 chr2L 8112 exon CG11023 + chr2L 8695 3` UTR CG11023 + chr2L 9278 3` UTR CG11023 + chr2L_6_5001 chr2L_5001 RAL-796 2 chr2L 47458 47491 chr2L 52563 52596 jockey 14 5105 6.5 6.5 6.5 1.9 5138 chr2L 47458 intron Cda5 - chr2L 50027 intron Cda5 - chr2L 52596 intron Cda5 - chr2L_14_50001 chr2L_50001 RAL-796 3 chr2L 63044 63077 chr2L 63128 63162 11 85 3.5 5.0 4.2 2.1 118 chr2L 63044 intron Cda5 - chr2L 63103 intron Cda5 - chr2L 63162 intron Cda5 - chr2L_11_60001 chr2L_60001 RAL-796 4 chr2L 73794 73814 chr2L 73896 73920 9 107 6.5 4.0 5.2 1.5 126 chr2L 73794 3` UTR,intron CR44987 -,galectin + chr2L 73857 intron galectin + chr2L 73920 intron galectin + chr2L_9_70001 chr2L_70001 RAL-796 5 chr2L 92565 92594 chr2L 92798 92827 8 233 1.0 3.5 2.2 2.5 262 chr2L 92565 intergenic not near genes chr2L 92696 intergenic not near genes chr2L 92827 intergenic not near genes chr2L_8_90001 chr2L_90001 RAL-796 6 chr2L 140749 140781 chr2L 141096 141117 13 346 2.5 3.5 3.0 3.2 368 chr2L 140749 intron,exon,5` UTR CG11455 +,CG31975 -,CG31976 - chr2L 140933 intron,5` UTR,5` UTR CG11455 +,CG31975 -,CG31976 - chr2L 141117 intron,3` UTR CG11455 +,CG31974 - chr2L_13_140001 chr2L_140001 RAL-796 7 chr2L 142492 142526 chr2L 142585 142619 17 92 2.5 2.0 2.2 5.3 127 chr2L 142492 intron,5` UTR CG11455 +,CG31974 - chr2L 142556 intron,5` UTR CG11455 +,CG31974 - chr2L 142619 intron,5` UTR CG11455 +,CG31974 - chr2L_17_140001 chr2L_140001 RAL-796 8 chr2L 165237 165241 chr2L 165502 165506 4 265 1.5 8.0 4.8 0.7 269 chr2L 165237 intron spen + chr2L 165372 intron spen + chr2L 165506 intron spen + chr2L_4_165001 chr2L_165001 RAL-796 9 chr2L 179462 179486 chr2L 179545 179568 7 82 1.5 0.0 0.8 3.9 106 chr2L 179462 intron spen + chr2L 179515 intron spen + chr2L 179568 intron spen + chr2L_7_175001 chr2L_175001 RAL-796 10 chr2L 314286 314314 chr2L 314371 314400 13 85 1.5 0.5 1.0 6.5 114 chr2L 314286 intron Plc21C + chr2L 314343 intron Plc21C + chr2L 314400 intron Plc21C + chr2L_13_310001 chr2L_310001 RAL-796 11 chr2L 325139 325157 chr2L 325216 325216 5 72 4.5 6.0 5.2 0.8 77 chr2L 325139 intron Plc21C + chr2L 325178 intron Plc21C + chr2L 325216 intron Plc21C + chr2L_5_325001 chr2L_325001 RAL-796 12 chr2L 575419 575438 chr2L 575515 575534 5 96 4.5 0.0 2.2 1.6 115 chr2L 575419 3` UTR cold + chr2L 575476 3` UTR cold + chr2L 575534 3` UTR cold + chr2L_5_575001 chr2L_575001 RAL-796 13 chr2L 585534 585562 chr2L 585612 585640 11 78 2.0 2.0 2.0 3.7 106 chr2L 585534 intron Gsc - chr2L 585587 intron Gsc - chr2L 585640 intron Gsc - chr2L_11_585001 chr2L_585001 RAL-796 14 chr2L 612628 612647 chr2L 612731 612734 5 99 2.5 3.0 2.8 1.3 106 chr2L 612628 intergenic not near genes chr2L 612681 intergenic not near genes chr2L 612734 intergenic not near genes chr2L_5_610001 chr2L_610001 RAL-796 15 chr2L 658560 658588 chr2L 658639 658667 10 78 1.5 1.5 1.5 4.0 107 chr2L 658560 intron ds - chr2L 658614 intron ds - chr2L 658667 intron ds - chr2L_10_655001 chr2L_655001 RAL-796 16 chr2L 770463 770491 chr2L 772244 772256 Bari1 5 1773 2.0 4.0 3.0 1.2 1793 chr2L 770463 intergenic not near genes chr2L 771360 intergenic not near genes chr2L 772256 intergenic CR44614 + chr2L_5_770001 chr2L_770001 RAL-796 17 chr2L 795267 795285 chr2L 795375 795383 4 106 4.5 0.0 2.2 1.2 116 chr2L 795267 intergenic not near genes chr2L 795325 intergenic not near genes chr2L 795383 intergenic not near genes chr2L_4_795001 chr2L_795001 RAL-796 18 chr2L 809567 809600 chr2L 809649 809682 12 82 1.0 0.5 0.8 6.7 115 chr2L 809567 intergenic not near genes chr2L 809624 intergenic not near genes chr2L 809682 intergenic not near genes chr2L_12_805001 chr2L_805001 RAL-796 19 chr2L 931639 931670 chr2L 931718 931749 7 78 4.0 3.0 3.5 1.6 110 chr2L 931639 intron CG4341 + chr2L 931694 intron CG4341 + chr2L 931749 intron CG4341 + chr2L_7_930001 chr2L_930001 RAL-796 20 chr2L 976879 976913 chr2L 984515 984549 roo 12 7636 2.0 3.5 2.8 3.2 7670 chr2L 976879 intergenic not near genes chr2L 980714 intergenic not near genes chr2L 984549 intergenic not near genes chr2L_12_980001 chr2L_980001 RAL-796 21 chr2L 996727 996755 chr2L 1005822 1005850 roo 12 9095 2.5 2.5 2.5 3.4 9123 chr2L 996727 intergenic not near genes chr2L 1001288 intergenic not near genes chr2L 1005850 intergenic not near genes chr2L_12_1000001 chr2L_1000001 RAL-796 22 chr2L 1035557 1035594 chr2L 1035634 1035671 9 77 1.5 1.5 1.5 3.6 114 chr2L 1035557 intron IA-2 - chr2L 1035614 intron IA-2 - chr2L 1035671 intron IA-2 - chr2L_9_1035001 chr2L_1035001 RAL-796 23 chr2L 1156858 1156876 chr2L 1156963 1156965 6 102 6.0 3.0 4.5 1.1 107 chr2L 1156858 intron capt - chr2L 1156912 intron capt - chr2L 1156965 intron capt - chr2L_6_1155001 chr2L_1155001 RAL-796 24 chr2L 1220129 1220147 chr2L 1227595 1227613 blood 7 7466 5.0 5.0 5.0 1.2 7484 chr2L 1220129 intron CG42329 + chr2L 1223871 intron CG42329 + chr2L 1227613 intron CG42329 + chr2L_7_1220001 chr2L_1220001 RAL-796 25 chr2L 1261239 1261252 chr2L 1261320 1261333 4 81 2.0 0.0 1.0 2.0 94 chr2L 1261239 intron robo3 + chr2L 1261286 intron robo3 + chr2L 1261333 intron robo3 + chr2L_4_1260001 chr2L_1260001 RAL-796 26 chr2L 1536509 1536523 chr2L 1536641 1536655 5 131 0.0 1.5 0.8 2.8 146 chr2L 1536509 intergenic not near genes chr2L 1536582 intergenic not near genes chr2L 1536655 intergenic not near genes chr2L_5_1535001 chr2L_1535001 RAL-796 27 chr2L 1541624 1541650 chr2L 1541729 1541759 8 108 1.5 3.0 2.2 2.5 135 chr2L 1541624 intergenic not near genes chr2L 1541692 intergenic not near genes chr2L 1541759 intergenic not near genes chr2L_8_1540001 chr2L_1540001 RAL-796 28 chr2L 1570694 1570719 chr2L 1573566 1573591 F-element 6 2872 0.0 4.5 2.2 1.9 2897 chr2L 1570694 intron haf + chr2L 1572142 intron haf + chr2L 1573591 intron haf + chr2L_6_1570001 chr2L_1570001 RAL-796 29 chr2L 1591868 1591885 chr2L 1591952 1591969 7 84 2.0 3.5 2.8 1.8 101 chr2L 1591868 intron haf + chr2L 1591918 intron haf + chr2L 1591969 intron haf + chr2L_7_1590001 chr2L_1590001 RAL-796 30 chr2L 1699256 1699293 chr2L 1699339 1699374 14 83 7.5 11.5 9.5 1.3 118 chr2L 1699256 3` UTR chinmo + chr2L 1699315 3` UTR chinmo + chr2L 1699374 3` UTR chinmo + chr2L_14_1695001 chr2L_1695001 RAL-796 31 chr2L 1711356 1711383 chr2L 1711679 1711707 mdg3 18 322 4.5 2.5 3.5 4.0 351 chr2L 1711356 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711532 3` UTR frtz - chr2L 1711707 3` UTR frtz - chr2L_18_1710001 chr2L_1710001 RAL-796 32 chr2L 1883416 1883447 chr2L 1883999 1884027 10 580 0.0 2.0 1.0 5.0 611 chr2L 1883416 intron CG15358 - chr2L 1883722 intron CG15358 - chr2L 1884027 exon CG15358 - chr2L_10_1880001 chr2L_1880001 RAL-796 33 chr2L 1925488 1925493 chr2L 1925565 1925570 5 77 3.5 3.5 3.5 1.1 82 chr2L 1925488 intron CG7337 + chr2L 1925529 intron CG7337 + chr2L 1925570 intron CG7337 + chr2L_5_1925001 chr2L_1925001 RAL-796 34 chr2L 1948622 1948658 chr2L 1948729 1948765 8 107 0.0 0.5 0.2 6.7 143 chr2L 1948622 intergenic not near genes chr2L 1948694 intergenic not near genes chr2L 1948765 intergenic not near genes chr2L_8_1945001 chr2L_1945001 RAL-796 35 chr2L 2100380 2100406 chr2L 2109531 2109547 roo 13 9150 4.5 2.5 3.5 2.9 9167 chr2L 2100380 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109547 intron dpr3 - chr2L_13_2100001 chr2L_2100001 RAL-796 36 chr2L 2112129 2112146 chr2L 2119773 2119796 opus 5 7647 2.0 1.5 1.8 1.8 7667 chr2L 2112129 intergenic not near genes chr2L 2115962 intergenic not near genes chr2L 2119796 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-796 37 chr2L 2260808 2260834 chr2L 2260894 2260920 9 86 1.0 1.5 1.2 4.1 112 chr2L 2260808 intergenic not near genes chr2L 2260864 intergenic not near genes chr2L 2260920 intergenic not near genes chr2L_9_2260001 chr2L_2260001 RAL-796 38 chr2L 2294057 2294075 chr2L 2299244 2299280 copia 5 5195 1.0 1.5 1.2 2.3 5223 chr2L 2294057 intergenic not near genes chr2L 2296668 intergenic not near genes chr2L 2299280 intergenic not near genes chr2L_5_2295001 chr2L_2295001 RAL-796 39 chr2L 2427393 2427398 chr2L 2427479 2427484 4 86 2.0 1.0 1.5 1.6 91 chr2L 2427393 3` UTR CR44912 - chr2L 2427438 3` UTR CR44912 - chr2L 2427484 3` UTR CR44912 - chr2L_4_2425001 chr2L_2425001 RAL-796 40 chr2L 2475676 2475702 chr2L 2475761 2475786 5 84 2.0 1.5 1.8 1.8 110 chr2L 2475676 intergenic not near genes chr2L 2475731 intergenic not near genes chr2L 2475786 intergenic not near genes chr2L_5_2475001 chr2L_2475001 RAL-796 41 chr2L 2565540 2565569 chr2L 2571608 2571637 297 4 6068 4.0 2.0 3.0 1.0 6097 chr2L 2565540 exon Cyp309a2 - chr2L 2568588 intron Cyp309a2 - chr2L 2571637 intron Cyp309a2 - chr2L_4_2565001 chr2L_2565001 RAL-796 42 chr2L 2618044 2618064 chr2L 2618123 2618143 7 78 4.0 4.0 4.0 1.4 99 chr2L 2618044 intergenic not near genes chr2L 2618094 intergenic not near genes chr2L 2618143 intergenic not near genes chr2L_7_2615001 chr2L_2615001 RAL-796 43 chr2L 2620620 2620651 chr2L 2620722 2620754 12 104 1.0 2.0 1.5 4.8 134 chr2L 2620620 3` UTR CG43403 + chr2L 2620687 3` UTR CG43403 + chr2L 2620754 3` UTR CG43403 + chr2L_12_2620001 chr2L_2620001 RAL-796 44 chr2L 2698868 2698894 chr2L 2698955 2698980 6 86 1.0 4.0 2.5 1.7 112 chr2L 2698868 intron CG31690 + chr2L 2698924 intron CG31690 + chr2L 2698980 intron CG31690 + chr2L_6_2695001 chr2L_2695001 RAL-796 45 chr2L 2709134 2709168 chr2L 2709212 2709246 7 78 0.0 1.0 0.5 4.7 112 chr2L 2709134 intron CG31690 + chr2L 2709190 intron CG31690 + chr2L 2709246 intron CG31690 + chr2L_7_2705001 chr2L_2705001 RAL-796 46 chr2L 2937421 2937450 chr2L 2937498 2937525 10 76 2.0 3.0 2.5 2.9 104 chr2L 2937421 intron lilli + chr2L 2937473 intron lilli + chr2L 2937525 intron lilli + chr2L_10_2935001 chr2L_2935001 RAL-796 47 chr2L 2945024 2945029 chr2L 2945122 2945127 4 98 6.5 4.5 5.5 0.6 103 chr2L 2945024 intron lilli + chr2L 2945076 5` UTR lilli + chr2L 2945127 5` UTR lilli + chr2L_4_2945001 chr2L_2945001 RAL-796 48 chr2L 3073034 3073059 chr2L 3078236 3078262 copia 12 5203 4.0 4.0 4.0 2.4 5228 chr2L 3073034 intron toc - chr2L 3075648 intron toc - chr2L 3078262 intron toc - chr2L_12_3075001 chr2L_3075001 RAL-796 49 chr2L 3104213 3104247 chr2L 3104300 3104331 16 85 3.0 1.5 2.2 5.0 118 chr2L 3104213 intron toc - chr2L 3104272 intron toc - chr2L 3104331 intron toc - chr2L_16_3100001 chr2L_3100001 RAL-796 50 chr2L 3108871 3108898 chr2L 3108948 3108975 12 77 0.0 0.0 0.0 12.0 104 chr2L 3108871 intron toc - chr2L 3108923 intron toc - chr2L 3108975 intron toc - chr2L_12_3105001 chr2L_3105001 RAL-796 51 chr2L 3117398 3117424 chr2L 3117691 3117714 7 289 4.5 1.5 3.0 1.8 316 chr2L 3117398 intron toc - chr2L 3117556 intron toc - chr2L 3117714 intron toc - chr2L_7_3115001 chr2L_3115001 RAL-796 52 chr2L 3147280 3147308 chr2L 3147357 3147385 11 77 4.0 4.0 4.0 2.2 105 chr2L 3147280 3` UTR Mad - chr2L 3147332 3` UTR Mad - chr2L 3147385 3` UTR Mad - chr2L_11_3145001 chr2L_3145001 RAL-796 53 chr2L 3251495 3251527 chr2L 3259060 3259092 springer 7 7565 1.5 3.0 2.2 2.2 7597 chr2L 3251495 intergenic not near genes chr2L 3255294 intergenic not near genes chr2L 3259092 intergenic not near genes chr2L_7_3255001 chr2L_3255001 RAL-796 54 chr2L 3286948 3286971 chr2L 3287129 3287155 5 183 6.5 1.5 4.0 1.0 207 chr2L 3286948 intergenic not near genes chr2L 3287052 intergenic not near genes chr2L 3287155 intergenic not near genes chr2L_5_3285001 chr2L_3285001 RAL-796 55 chr2L 3291236 3291269 chr2L 3291316 3291349 7 79 2.5 4.5 3.5 1.6 113 chr2L 3291236 intergenic CG9664 - chr2L 3291292 3` UTR CG9664 - chr2L 3291349 3` UTR CG9664 - chr2L_7_3290001 chr2L_3290001 RAL-796 56 chr2L 3367060 3367079 chr2L 3367139 3367158 10 79 3.0 2.5 2.8 2.6 98 chr2L 3367060 intron CG34394 - chr2L 3367109 intron CG34394 - chr2L 3367158 intron CG34394 - chr2L_10_3365001 chr2L_3365001 RAL-796 57 chr2L 3385387 3385416 chr2L 3385488 3385511 17 99 0.5 2.5 1.5 6.8 124 chr2L 3385387 intergenic not near genes chr2L 3385449 intergenic not near genes chr2L 3385511 intergenic not near genes chr2L_17_3385001 chr2L_3385001 RAL-796 58 chr2L 3388606 3388631 chr2L 3388847 3388872 pogo 5 241 2.5 1.5 2.0 1.7 266 chr2L 3388606 intergenic CG42460 - chr2L 3388739 intergenic CG42460 - chr2L 3388872 intergenic CG42460 -,CR44791 + chr2L_5_3385001 chr2L_3385001 RAL-796 59 chr2L 3393546 3393578 chr2L 3393656 3393689 12 111 1.0 1.5 1.2 5.5 143 chr2L 3393546 intergenic not near genes chr2L 3393618 intergenic not near genes chr2L 3393689 intergenic not near genes chr2L_12_3390001 chr2L_3390001 RAL-796 60 chr2L 3427738 3427774 chr2L 3428555 3428585 15 813 28.5 10.5 19.5 0.7 847 chr2L 3427738 intergenic not near genes chr2L 3428162 intergenic not near genes chr2L 3428585 intergenic not near genes chr2L_15_3425001 chr2L_3425001 RAL-796 61 chr2L 3436022 3436063 chr2L 3436126 3436135 7 100 1.5 0.5 1.0 3.5 113 chr2L 3436022 intergenic not near genes chr2L 3436078 intergenic not near genes chr2L 3436135 intergenic not near genes chr2L_7_3435001 chr2L_3435001 RAL-796 62 chr2L 3438567 3438579 chr2L 3438649 3438661 4 82 4.5 5.5 5.0 0.7 94 chr2L 3438567 intergenic not near genes chr2L 3438614 intergenic not near genes chr2L 3438661 intergenic not near genes chr2L_4_3435001 chr2L_3435001 RAL-796 63 chr2L 3508346 3508356 chr2L 3508424 3508434 5 78 6.0 2.0 4.0 1.0 88 chr2L 3508346 intergenic tim -,CR45299 + chr2L 3508390 intergenic CR45299 +,tim - chr2L 3508434 intergenic CR45299 +,tim - chr2L_5_3505001 chr2L_3505001 RAL-796 64 chr2L 3523034 3523055 chr2L 3523146 3523168 8 112 0.5 1.5 1.0 4.0 134 chr2L 3523034 exon Sr-CIV - chr2L 3523101 intron Sr-CIV - chr2L 3523168 exon Sr-CIV - chr2L_8_3520001 chr2L_3520001 RAL-796 65 chr2L 3603626 3603652 chr2L 3603722 3603747 10 95 1.5 4.0 2.8 2.6 121 chr2L 3603626 intergenic not near genes chr2L 3603686 intergenic not near genes chr2L 3603747 intergenic odd - chr2L_10_3600001 chr2L_3600001 RAL-796 66 chr2L 3649278 3649297 chr2L 3649366 3649385 5 88 5.0 4.0 4.5 0.9 107 chr2L 3649278 intron for - chr2L 3649332 intron for - chr2L 3649385 intron for - chr2L_5_3645001 chr2L_3645001 RAL-796 67 chr2L 3649788 3649805 chr2L 3654990 3655007 copia 5 5202 2.0 4.5 3.2 1.2 5219 chr2L 3649788 intron for - chr2L 3652398 intron for - chr2L 3655007 intron for - chr2L_5_3650001 chr2L_3650001 RAL-796 68 chr2L 3784812 3784823 chr2L 3785671 3785682 6 859 14.5 8.5 11.5 0.5 870 chr2L 3784812 intergenic CG31960 + chr2L 3785247 exon CG31960 + chr2L 3785682 intergenic CG31958 +,CG31960 + chr2L_6_3785001 chr2L_3785001 RAL-796 69 chr2L 3831847 3831857 chr2L 3831928 3831938 4 81 2.0 3.5 2.8 1.1 91 chr2L 3831847 intergenic not near genes chr2L 3831892 intergenic not near genes chr2L 3831938 intergenic not near genes chr2L_4_3830001 chr2L_3830001 RAL-796 70 chr2L 3891894 3891925 chr2L 3891979 3892010 10 84 2.0 2.5 2.2 3.1 116 chr2L 3891894 intron capu - chr2L 3891952 intron capu - chr2L 3892010 intron capu - chr2L_10_3890001 chr2L_3890001 RAL-796 71 chr2L 4066042 4066059 chr2L 4068867 4068884 Juan 5 2825 5.5 4.0 4.8 0.9 2842 chr2L 4066042 intron ed + chr2L 4067463 intron ed + chr2L 4068884 intron ed + chr2L_5_4065001 chr2L_4065001 RAL-796 72 chr2L 4069271 4069301 chr2L 4069483 4069513 6 212 2.5 2.5 2.5 1.7 242 chr2L 4069271 intron ed + chr2L 4069392 intron ed + chr2L 4069513 intron ed + chr2L_6_4065001 chr2L_4065001 RAL-796 73 chr2L 4150631 4150648 chr2L 4150711 4150728 7 80 0.0 1.5 0.8 3.9 97 chr2L 4150631 exon CG2955 + chr2L 4150680 exon CG2955 + chr2L 4150728 exon CG2955 + chr2L_7_4150001 chr2L_4150001 RAL-796 74 chr2L 4166376 4166411 chr2L 4166459 4166494 16 83 3.5 2.5 3.0 4.0 118 chr2L 4166376 intergenic Or24a - chr2L 4166435 intergenic Or24a - chr2L 4166494 intergenic Or24a - chr2L_16_4165001 chr2L_4165001 RAL-796 75 chr2L 4192990 4193016 chr2L 4193071 4193097 11 80 3.5 3.5 3.5 2.4 107 chr2L 4192990 intron CG3714 - chr2L 4193044 intron CG3714 - chr2L 4193097 intron CG3714 - chr2L_11_4190001 chr2L_4190001 RAL-796 76 chr2L 4351474 4351493 chr2L 4351550 4351559 11 75 3.0 0.0 1.5 4.4 85 chr2L 4351474 intergenic CR44700 + chr2L 4351516 intergenic CR44700 + chr2L 4351559 intergenic CR44700 + chr2L_11_4350001 chr2L_4350001 RAL-796 77 chr2L 4401726 4401756 chr2L 4401870 4401892 5 137 2.5 1.5 2.0 1.7 166 chr2L 4401726 exon CG33003 + chr2L 4401809 intron CG33003 + chr2L 4401892 exon CG33003 + chr2L_5_4400001 chr2L_4400001 RAL-796 78 chr2L 4424513 4424545 chr2L 4424623 4424656 11 110 3.0 2.0 2.5 3.1 143 chr2L 4424513 intron CG15431 - chr2L 4424584 intron CG15431 - chr2L 4424656 intron CG15431 - chr2L_11_4420001 chr2L_4420001 RAL-796 79 chr2L 4601704 4601735 chr2L 4609145 4609167 mdg1 17 7440 4.0 6.0 5.0 2.8 7463 chr2L 4601704 intron dp - chr2L 4605436 intron dp - chr2L 4609167 intron dp - chr2L_17_4605001 chr2L_4605001 RAL-796 80 chr2L 4661849 4661857 chr2L 4669429 4669437 opus 6 7580 0.5 3.5 2.0 2.0 7588 chr2L 4661849 intergenic not near genes chr2L 4665643 intergenic not near genes chr2L 4669437 intergenic not near genes chr2L_6_4665001 chr2L_4665001 RAL-796 81 chr2L 4681299 4681321 chr2L 4681563 4681585 16 264 1.0 4.5 2.8 4.2 286 chr2L 4681299 intergenic not near genes chr2L 4681442 intergenic not near genes chr2L 4681585 intergenic not near genes chr2L_16_4680001 chr2L_4680001 RAL-796 82 chr2L 4695029 4695053 chr2L 4695120 4695144 4 91 1.0 2.0 1.5 1.6 115 chr2L 4695029 intron CG34351 + chr2L 4695086 intron CG34351 + chr2L 4695144 intron CG34351 + chr2L_4_4695001 chr2L_4695001 RAL-796 83 chr2L 4697332 4697355 chr2L 4697558 4697581 10 225 1.5 5.0 3.2 2.4 249 chr2L 4697332 intron CG34351 + chr2L 4697456 intron CG34351 + chr2L 4697581 intron CG34351 + chr2L_10_4695001 chr2L_4695001 RAL-796 84 chr2L 4710345 4710375 chr2L 4710428 4710458 12 82 0.5 1.0 0.8 6.7 113 chr2L 4710345 intron CG34351 + chr2L 4710402 intron CG34351 + chr2L 4710458 intron CG34351 + chr2L_12_4710001 chr2L_4710001 RAL-796 85 chr2L 4782043 4782055 chr2L 4782120 4782132 4 77 2.0 2.0 2.0 1.3 89 chr2L 4782043 intron CG15630 - chr2L 4782088 intron CG15630 - chr2L 4782132 intron CG15630 - chr2L_4_4780001 chr2L_4780001 RAL-796 86 chr2L 4819496 4819516 chr2L 4819619 4819639 10 123 2.0 0.5 1.2 4.5 143 chr2L 4819496 intergenic not near genes chr2L 4819568 intergenic not near genes chr2L 4819639 intergenic not near genes chr2L_10_4815001 chr2L_4815001 RAL-796 87 chr2L 4918171 4918191 chr2L 4923244 4923264 jockey 6 5073 0.5 4.0 2.2 1.9 5093 chr2L 4918171 intron hoe1 - chr2L 4920718 intron hoe1 - chr2L 4923264 intron hoe1 - chr2L_6_4920001 chr2L_4920001 RAL-796 88 chr2L 5027962 5027979 chr2L 5028046 5028063 4 84 1.0 3.0 2.0 1.3 101 chr2L 5027962 intron vkg - chr2L 5028012 intron vkg - chr2L 5028063 intron vkg - chr2L_4_5025001 chr2L_5025001 RAL-796 89 chr2L 5092416 5092438 chr2L 5092503 5092525 4 87 4.0 3.0 3.5 0.9 109 chr2L 5092416 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092525 intron pgant5 - chr2L_4_5090001 chr2L_5090001 RAL-796 90 chr2L 5117298 5117321 chr2L 5117380 5117403 5 81 0.5 1.0 0.8 2.8 105 chr2L 5117298 intron Msp300 + chr2L 5117350 intron Msp300 + chr2L 5117403 intron Msp300 + chr2L_5_5115001 chr2L_5115001 RAL-796 91 chr2L 5120981 5121006 chr2L 5121070 5121100 4 93 2.0 8.0 5.0 0.7 119 chr2L 5120981 intron Msp300 + chr2L 5121040 intron Msp300 + chr2L 5121100 intron Msp300 + chr2L_4_5120001 chr2L_5120001 RAL-796 92 chr2L 5200544 5200559 chr2L 5215806 5215815 4 15258 21.5 15.5 18.5 0.2 15271 chr2L 5200544 exon Msp300 + chr2L 5208180 exon Cyp28d2 + chr2L 5215815 exon CG14034 - chr2L_4_5205001 chr2L_5205001 RAL-796 93 chr2L 5296217 5296248 chr2L 5296296 5296327 15 79 3.0 4.0 3.5 3.3 110 chr2L 5296217 intron vri + chr2L 5296272 intron vri + chr2L 5296327 intron vri + chr2L_15_5295001 chr2L_5295001 RAL-796 94 chr2L 5342779 5342803 chr2L 5345159 5345183 Doc 4 2380 4.0 1.5 2.8 1.1 2404 chr2L 5342779 intergenic not near genes chr2L 5343981 intergenic not near genes chr2L 5345183 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-796 95 chr2L 5508531 5508558 chr2L 5508607 5508634 8 75 0.5 2.5 1.5 3.2 103 chr2L 5508531 intergenic not near genes chr2L 5508582 intergenic not near genes chr2L 5508634 intergenic not near genes chr2L_8_5505001 chr2L_5505001 RAL-796 96 chr2L 5787625 5787651 chr2L 5787721 5787744 4 95 12.0 13.0 12.5 0.3 119 chr2L 5787625 intron CG9171 - chr2L 5787684 intron CG9171 - chr2L 5787744 intron CG9171 - chr2L_4_5785001 chr2L_5785001 RAL-796 97 chr2L 5813669 5813693 chr2L 5813774 5813798 6 105 5.5 8.0 6.8 0.8 129 chr2L 5813669 intergenic not near genes chr2L 5813734 intergenic not near genes chr2L 5813798 intergenic not near genes chr2L_6_5810001 chr2L_5810001 RAL-796 98 chr2L 5814691 5814710 chr2L 5814774 5814793 5 83 3.5 1.0 2.2 1.6 102 chr2L 5814691 intergenic not near genes chr2L 5814742 intergenic not near genes chr2L 5814793 intergenic not near genes chr2L_5_5810001 chr2L_5810001 RAL-796 99 chr2L 5819691 5819708 chr2L 5819775 5819792 5 84 7.0 4.0 5.5 0.8 101 chr2L 5819691 intergenic not near genes chr2L 5819742 intergenic not near genes chr2L 5819792 intergenic not near genes chr2L_5_5815001 chr2L_5815001 RAL-796 100 chr2L 5827711 5827741 chr2L 5836718 5836749 roo 16 9007 3.5 2.5 3.0 4.0 9038 chr2L 5827711 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836749 intron TrissinR + chr2L_16_5830001 chr2L_5830001 RAL-796 101 chr2L 5870473 5870500 chr2L 5870549 5870569 6 75 13.5 16.0 14.8 0.4 96 chr2L 5870473 intron rau - chr2L 5870521 intron rau - chr2L 5870569 intron rau - chr2L_6_5870001 chr2L_5870001 RAL-796 102 chr2L 5897594 5897627 chr2L 5897677 5897709 13 82 5.5 3.5 4.5 2.4 115 chr2L 5897594 intergenic not near genes chr2L 5897652 intergenic not near genes chr2L 5897709 intergenic not near genes chr2L_13_5895001 chr2L_5895001 RAL-796 103 chr2L 5904460 5904474 chr2L 5904540 5904554 4 80 1.5 0.0 0.8 2.2 94 chr2L 5904460 intron CG9021 - chr2L 5904507 intron CG9021 - chr2L 5904554 intron CG9021 - chr2L_4_5900001 chr2L_5900001 RAL-796 104 chr2L 5989038 5989061 chr2L 5989114 5989137 4 76 8.0 9.0 8.5 0.4 99 chr2L 5989038 intergenic ifc +,lid - chr2L 5989088 intergenic ifc +,lid - chr2L 5989137 intergenic lid -,ifc + chr2L_4_5985001 chr2L_5985001 RAL-796 105 chr2L 5993333 5993360 chr2L 5993423 5993450 5 90 5.5 7.5 6.5 0.7 117 chr2L 5993333 exon lid - chr2L 5993392 intron lid - chr2L 5993450 intron lid - chr2L_5_5990001 chr2L_5990001 RAL-796 106 chr2L 6103217 6103245 chr2L 6103294 6103322 4 77 11.0 12.5 11.8 0.3 105 chr2L 6103217 intron stai + chr2L 6103270 intron stai + chr2L 6103322 intron stai + chr2L_4_6100001 chr2L_6100001 RAL-796 107 chr2L 6283945 6283980 chr2L 6284055 6284090 6 110 0.0 0.0 0.0 6.0 145 chr2L 6283945 intron Ddr + chr2L 6284018 intron Ddr + chr2L 6284090 intron Ddr + chr2L_6_6280001 chr2L_6280001 RAL-796 108 chr2L 6363150 6363180 chr2L 6366072 6366102 Burdock 11 2920 1.0 3.0 2.0 3.7 2952 chr2L 6363150 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366102 intergenic not near genes chr2L_11_6360001 chr2L_6360001 RAL-796 109 chr2L 6426855 6426887 chr2L 6445115 6445146 roo 9 18260 3.0 2.5 2.8 2.4 18291 chr2L 6426855 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445146 exon CG9527 - chr2L_9_6435001 chr2L_6435001 RAL-796 110 chr2L 6463560 6463584 chr2L 6463647 6463676 6 88 3.0 2.0 2.5 1.7 116 chr2L 6463560 exon CG16947 - chr2L 6463618 exon CG16947 - chr2L 6463676 exon CG16947 - chr2L_6_6460001 chr2L_6460001 RAL-796 111 chr2L 6544370 6544395 chr2L 6544462 6544487 13 92 2.5 2.5 2.5 3.7 117 chr2L 6544370 intron eya - chr2L 6544428 intron eya - chr2L 6544487 intron eya - chr2L_13_6540001 chr2L_6540001 RAL-796 112 chr2L 6640906 6640939 chr2L 6641001 6641034 10 94 2.5 1.5 2.0 3.3 128 chr2L 6640906 exon CG31635 - chr2L 6640970 intron CG31635 - chr2L 6641034 intron CG31635 - chr2L_10_6640001 chr2L_6640001 RAL-796 113 chr2L 6715754 6715783 chr2L 6715839 6715868 6 85 1.5 4.0 2.8 1.6 114 chr2L 6715754 intron AkhR - chr2L 6715811 intron AkhR - chr2L 6715868 intron AkhR - chr2L_6_6715001 chr2L_6715001 RAL-796 114 chr2L 6771435 6771442 chr2L 6771514 6771521 4 79 0.0 0.5 0.2 3.3 86 chr2L 6771435 intron CG11321 - chr2L 6771478 intron CG11321 - chr2L 6771521 intron CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-796 115 chr2L 6799535 6799559 chr2L 6799623 6799647 6 88 2.5 0.0 1.2 2.7 112 chr2L 6799535 5` UTR CR43610 + chr2L 6799591 5` UTR CR43610 + chr2L 6799647 intergenic CR43610 +,CG17376 - chr2L_6_6795001 chr2L_6795001 RAL-796 116 chr2L 6969281 6969306 chr2L 6969361 6969386 12 80 4.0 4.5 4.2 2.3 105 chr2L 6969281 3` UTR snRNP-U1-70K - chr2L 6969334 3` UTR snRNP-U1-70K - chr2L 6969386 3` UTR snRNP-U1-70K - chr2L_12_6965001 chr2L_6965001 RAL-796 117 chr2L 7165781 7165811 chr2L 7165862 7165892 9 81 2.5 2.5 2.5 2.6 111 chr2L 7165781 intergenic not near genes chr2L 7165836 intergenic not near genes chr2L 7165892 intergenic not near genes chr2L_9_7165001 chr2L_7165001 RAL-796 118 chr2L 7218406 7218432 chr2L 7218483 7218510 8 77 1.5 2.5 2.0 2.7 104 chr2L 7218406 intron CG13784 - chr2L 7218458 intron CG13784 - chr2L 7218510 intron CG13784 - chr2L_8_7215001 chr2L_7215001 RAL-796 119 chr2L 7343326 7343348 chr2L 7350442 7350464 roo 6 7115 4.0 1.5 2.8 1.6 7138 chr2L 7343326 intron Wnt6 + chr2L 7346895 intron Wnt6 + chr2L 7350464 intron Wnt6 + chr2L_6_7345001 chr2L_7345001 RAL-796 120 chr2L 7405781 7405787 chr2L 7405861 7405867 5 80 9.0 0.0 4.5 0.9 86 chr2L 7405781 intron CG5177 + chr2L 7405824 intron CG5177 + chr2L 7405867 intron CG5177 + chr2L_5_7405001 chr2L_7405001 RAL-796 121 chr2L 7502736 7502768 chr2L 7502812 7502844 15 75 5.0 4.5 4.8 2.6 108 chr2L 7502736 intron RapGAP1 - chr2L 7502790 intron RapGAP1 - chr2L 7502844 intron RapGAP1 - chr2L_15_7500001 chr2L_7500001 RAL-796 122 chr2L 7630206 7630233 chr2L 7630283 7630311 12 77 2.0 3.0 2.5 3.4 105 chr2L 7630206 intergenic not near genes chr2L 7630258 intergenic not near genes chr2L 7630311 intergenic not near genes chr2L_12_7630001 chr2L_7630001 RAL-796 123 chr2L 7653046 7653072 chr2L 7653140 7653166 9 94 6.0 0.0 3.0 2.2 120 chr2L 7653046 intron Slob - chr2L 7653106 intron Slob - chr2L 7653166 intron Slob - chr2L_9_7650001 chr2L_7650001 RAL-796 124 chr2L 7655414 7655423 chr2L 7655504 7655513 5 90 1.0 4.5 2.8 1.3 99 chr2L 7655414 intron Slob - chr2L 7655464 intron Slob - chr2L 7655513 intron Slob - chr2L_5_7655001 chr2L_7655001 RAL-796 125 chr2L 7768849 7768870 chr2L 7768925 7768946 6 75 5.5 6.5 6.0 0.9 97 chr2L 7768849 intron CG7191 + chr2L 7768898 intron CG7191 + chr2L 7768946 intron CG7191 + chr2L_6_7765001 chr2L_7765001 RAL-796 126 chr2L 7959044 7959071 chr2L 7960455 7960482 pogo 13 1411 4.5 1.5 3.0 3.2 1438 chr2L 7959044 intron Snoo - chr2L 7959763 intron Snoo - chr2L 7960482 intron Snoo - chr2L_13_7955001 chr2L_7955001 RAL-796 127 chr2L 7977093 7977111 chr2L 7984065 7984087 297 8 6974 2.5 2.0 2.2 2.5 6994 chr2L 7977093 intron Snoo - chr2L 7980590 intron Snoo - chr2L 7984087 intron,5` UTR Snoo -,CG7231 + chr2L_8_7980001 chr2L_7980001 RAL-796 128 chr2L 8013615 8013640 chr2L 8018820 8018837 copia 7 5202 2.5 0.0 1.2 3.2 5222 chr2L 8013615 intron Tg + chr2L 8016226 intron Tg + chr2L 8018837 intron Tg + chr2L_7_8015001 chr2L_8015001 RAL-796 129 chr2L 8171275 8171295 chr2L 8171356 8171376 6 81 0.0 2.5 1.2 2.7 101 chr2L 8171275 intron Piezo + chr2L 8171326 intron Piezo + chr2L 8171376 intron Piezo + chr2L_6_8170001 chr2L_8170001 RAL-796 130 chr2L 8244742 8244745 chr2L 8244864 8244867 4 122 1.0 3.5 2.2 1.2 125 chr2L 8244742 intron CG8086 - chr2L 8244804 intron CG8086 - chr2L 8244867 intron CG8086 - chr2L_4_8240001 chr2L_8240001 RAL-796 131 chr2L 8258169 8258192 chr2L 8258266 8258289 6 97 0.5 2.5 1.5 2.4 120 chr2L 8258169 intergenic Btk29A -,mir-2b-1 - chr2L 8258229 intergenic Btk29A -,mir-2b-1 - chr2L 8258289 intergenic Btk29A -,mir-2b-1 - chr2L_6_8255001 chr2L_8255001 RAL-796 132 chr2L 8277856 8277867 chr2L 8277936 8277947 5 80 0.0 0.0 0.0 5.0 91 chr2L 8277856 intron Btk29A - chr2L 8277902 intron Btk29A - chr2L 8277947 intron Btk29A - chr2L_5_8275001 chr2L_8275001 RAL-796 133 chr2L 8286296 8286329 chr2L 8286383 8286414 13 86 1.5 5.5 3.5 2.9 118 chr2L 8286296 intron Btk29A - chr2L 8286355 intron Btk29A - chr2L 8286414 intron Btk29A - chr2L_13_8285001 chr2L_8285001 RAL-796 134 chr2L 8452419 8452451 chr2L 8461590 8461622 roo 8 9171 3.0 4.0 3.5 1.8 9203 chr2L 8452419 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461622 intron fu12 - chr2L_8_8455001 chr2L_8455001 RAL-796 135 chr2L 8551653 8551663 chr2L 8551866 8551876 4 213 0.0 0.0 0.0 4.0 223 chr2L 8551653 intron Sema-1a + chr2L 8551764 intron Sema-1a + chr2L 8551876 intron Sema-1a + chr2L_4_8550001 chr2L_8550001 RAL-796 136 chr2L 8799801 8799831 chr2L 8799917 8799944 8 115 2.5 5.0 3.8 1.7 143 chr2L 8799801 intergenic not near genes chr2L 8799872 intergenic not near genes chr2L 8799944 intergenic not near genes chr2L_8_8795001 chr2L_8795001 RAL-796 137 chr2L 8815447 8815743 chr2L 8815529 8815824 10 82 5.0 2.5 3.8 2.1 377 chr2L 8815447 intergenic not near genes chr2L 8815636 intergenic not near genes chr2L 8815824 intergenic not near genes chr2L_10_8815001 chr2L_8815001 RAL-796 138 chr2L 8815767 8815777 chr2L 8815847 8815858 5 80 2.5 6.5 4.5 0.9 91 chr2L 8815767 intergenic not near genes chr2L 8815812 intergenic not near genes chr2L 8815858 intergenic not near genes chr2L_5_8815001 chr2L_8815001 RAL-796 139 chr2L 9000277 9000312 chr2L 9007787 9007822 roo 19 7510 3.5 3.5 3.5 4.2 7545 chr2L 9000277 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007822 intergenic not near genes chr2L_19_9000001 chr2L_9000001 RAL-796 140 chr2L 9025820 9025854 chr2L 9025904 9025938 13 83 3.0 3.0 3.0 3.2 118 chr2L 9025820 intron,3` UTR CG9582 -,CR44352 - chr2L 9025879 intron,3` UTR CG9582 -,CR44352 - chr2L 9025938 intron,3` UTR CG9582 -,CR44352 - chr2L_13_9025001 chr2L_9025001 RAL-796 141 chr2L 9073273 9073300 chr2L 9073359 9073386 9 85 0.5 4.5 2.5 2.6 113 chr2L 9073273 intergenic not near genes chr2L 9073330 intergenic not near genes chr2L 9073386 intergenic not near genes chr2L_9_9070001 chr2L_9070001 RAL-796 142 chr2L 9084339 9084340 chr2L 16217659 16217660 8 7133320 8.5 20.5 14.5 0.5 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-796 143 chr2L 9117261 9117290 chr2L 9117349 9117378 4 88 2.0 2.5 2.2 1.2 117 chr2L 9117261 intergenic not near genes chr2L 9117320 intergenic not near genes chr2L 9117378 intergenic not near genes chr2L_4_9115001 chr2L_9115001 RAL-796 144 chr2L 9285028 9285040 chr2L 9285103 9285115 4 74 4.0 1.5 2.8 1.1 87 chr2L 9285028 intron Ggamma30A + chr2L 9285072 intron Ggamma30A + chr2L 9285115 intron Ggamma30A + chr2L_4_9285001 chr2L_9285001 RAL-796 145 chr2L 9287328 9287356 chr2L 9287425 9287452 13 97 1.5 6.0 3.8 2.7 124 chr2L 9287328 intron Ggamma30A + chr2L 9287390 intron Ggamma30A + chr2L 9287452 intron Ggamma30A + chr2L_13_9285001 chr2L_9285001 RAL-796 146 chr2L 9297377 9297404 chr2L 9297454 9297480 14 77 3.5 4.0 3.8 2.9 103 chr2L 9297377 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297480 3` UTR Ggamma30A + chr2L_14_9295001 chr2L_9295001 RAL-796 147 chr2L 9304348 9304510 chr2L 9304432 9304589 13 81 1.5 1.0 1.2 5.9 241 chr2L 9304348 intergenic CR42844 - chr2L 9304468 3` UTR CR42844 - chr2L 9304589 3` UTR CR42844 - chr2L_13_9300001 chr2L_9300001 RAL-796 148 chr2L 9321728 9321758 chr2L 9321804 9321834 5 76 1.5 2.5 2.0 1.7 106 chr2L 9321728 intergenic not near genes chr2L 9321781 intergenic not near genes chr2L 9321834 intergenic not near genes chr2L_5_9320001 chr2L_9320001 RAL-796 149 chr2L 9454977 9455002 chr2L 9455078 9455104 4 102 2.0 2.5 2.2 1.2 127 chr2L 9454977 intron numb + chr2L 9455040 intron numb + chr2L 9455104 intron numb + chr2L_4_9455001 chr2L_9455001 RAL-796 150 chr2L 9460756 9460766 chr2L 9460842 9460852 4 86 3.5 0.0 1.8 1.4 96 chr2L 9460756 intron numb + chr2L 9460804 intron numb + chr2L 9460852 intron numb + chr2L_4_9460001 chr2L_9460001 RAL-796 151 chr2L 9493248 9493268 chr2L 9493331 9493346 5 82 3.0 2.5 2.8 1.3 98 chr2L 9493248 intron Gdi - chr2L 9493297 intron Gdi - chr2L 9493346 intron Gdi - chr2L_5_9490001 chr2L_9490001 RAL-796 152 chr2L 9543760 9543786 chr2L 9543837 9543863 6 77 0.5 0.5 0.5 4.0 103 chr2L 9543760 intergenic Cpr30B +,CG13113 + chr2L 9543812 intergenic Cpr30B +,CG13113 + chr2L 9543863 intergenic Cpr30B +,CG13113 + chr2L_6_9540001 chr2L_9540001 RAL-796 153 chr2L 9622919 9622943 chr2L 9623001 9623025 5 82 0.5 2.5 1.5 2.0 106 chr2L 9622919 3` UTR GlcAT-S + chr2L 9622972 3` UTR GlcAT-S + chr2L 9623025 3` UTR GlcAT-S + chr2L_5_9620001 chr2L_9620001 RAL-796 154 chr2L 9724918 9724951 chr2L 9725259 9725292 5 341 2.0 3.0 2.5 1.4 374 chr2L 9724918 intron Nckx30C - chr2L 9725105 intron Nckx30C - chr2L 9725292 intron Nckx30C - chr2L_5_9725001 chr2L_9725001 RAL-796 155 chr2L 9730975 9731001 chr2L 9731058 9731083 8 83 3.5 4.5 4.0 1.6 108 chr2L 9730975 intron Nckx30C - chr2L 9731029 intron Nckx30C - chr2L 9731083 intron Nckx30C - chr2L_8_9730001 chr2L_9730001 RAL-796 156 chr2L 9852769 9852799 chr2L 9852848 9852874 9 78 0.5 2.5 1.5 3.6 105 chr2L 9852769 intron nAChRalpha6 - chr2L 9852822 intron nAChRalpha6 - chr2L 9852874 intron nAChRalpha6 - chr2L_9_9850001 chr2L_9850001 RAL-796 157 chr2L 9973729 9973759 chr2L 9980844 9980878 HMS-Beagle 10 7115 5.0 1.5 3.2 2.4 7149 chr2L 9973729 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980878 intergenic not near genes chr2L_10_9975001 chr2L_9975001 RAL-796 158 chr2L 10051725 10051733 chr2L 10051810 10051817 4 83 6.5 3.0 4.8 0.7 92 chr2L 10051725 5` UTR CR44874 + chr2L 10051771 5` UTR CR44874 + chr2L 10051817 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-796 159 chr2L 10051737 10051750 chr2L 10051809 10051835 11 80 3.0 3.0 3.0 2.8 98 chr2L 10051737 5` UTR CR44874 + chr2L 10051786 5` UTR CR44874 + chr2L 10051835 5` UTR CR44874 + chr2L_11_10050001 chr2L_10050001 RAL-796 160 chr2L 10078469 10078496 chr2L 10078570 10078584 12 99 4.5 1.0 2.8 3.2 115 chr2L 10078469 intron CG44153 - chr2L 10078526 intron CG44153 - chr2L 10078584 intron CG44153 - chr2L_12_10075001 chr2L_10075001 RAL-796 161 chr2L 10177904 10177930 chr2L 10177984 10178010 6 79 2.0 0.5 1.2 2.7 106 chr2L 10177904 intron CG44153 - chr2L 10177957 intron CG44153 - chr2L 10178010 intron CG44153 - chr2L_6_10175001 chr2L_10175001 RAL-796 162 chr2L 10433059 10433079 chr2L 10433773 10433793 6 714 13.0 30.0 21.5 0.3 734 chr2L 10433059 3` UTR,3` UTR TfIIB +,CG5337 - chr2L 10433426 exon CG5337 - chr2L 10433793 intron CG5337 - chr2L_6_10430001 chr2L_10430001 RAL-796 163 chr2L 10474392 10474406 chr2L 10474468 10474487 5 80 1.5 0.5 1.0 2.5 95 chr2L 10474392 intergenic RluA-1 - chr2L 10474440 intergenic RluA-1 - chr2L 10474487 intergenic RluA-1 - chr2L_5_10470001 chr2L_10470001 RAL-796 164 chr2L 10490277 10490309 chr2L 10490359 10490390 16 81 0.5 2.5 1.5 6.4 113 chr2L 10490277 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490334 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490390 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_16_10490001 chr2L_10490001 RAL-796 165 chr2L 10495306 10495316 chr2L 10495383 10495393 5 77 6.0 0.0 3.0 1.2 87 chr2L 10495306 intron Myo31DF - chr2L 10495350 intron Myo31DF - chr2L 10495393 intron Myo31DF - chr2L_5_10495001 chr2L_10495001 RAL-796 166 chr2L 10572714 10572732 chr2L 10572795 10572813 5 81 3.5 4.0 3.8 1.0 99 chr2L 10572714 intron Trim9 + chr2L 10572764 intron Trim9 + chr2L 10572813 intron Trim9 + chr2L_5_10570001 chr2L_10570001 RAL-796 167 chr2L 10580790 10580823 chr2L 10580871 10580904 10 79 2.0 3.0 2.5 2.9 114 chr2L 10580790 intron Trim9 + chr2L 10580847 intron Trim9 + chr2L 10580904 intron Trim9 + chr2L_10_10580001 chr2L_10580001 RAL-796 168 chr2L 10592842 10592873 chr2L 10600504 10600535 opus 4 7662 1.5 3.0 2.2 1.2 7693 chr2L 10592842 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600535 intron Trim9 + chr2L_4_10595001 chr2L_10595001 RAL-796 169 chr2L 10740325 10740354 chr2L 10740420 10740449 8 94 6.5 3.0 4.8 1.4 124 chr2L 10740325 3` UTR CG12299 + chr2L 10740387 3` UTR CG12299 + chr2L 10740449 3` UTR CG12299 + chr2L_8_10740001 chr2L_10740001 RAL-796 170 chr2L 10791862 10791893 chr2L 10791941 10791972 9 79 7.5 7.0 7.2 1.1 110 chr2L 10791862 intron CG31869 - chr2L 10791917 intron CG31869 - chr2L 10791972 intron CG31869 - chr2L_9_10790001 chr2L_10790001 RAL-796 171 chr2L 10862857 10862868 chr2L 10864454 10864481 Rt1c 4 1609 4.5 5.0 4.8 0.7 1624 chr2L 10862857 3` UTR CR43807 - chr2L 10863669 intron CR43807 - chr2L 10864481 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-796 172 chr2L 10912986 10913001 chr2L 10913065 10913080 8 79 4.0 5.5 4.8 1.4 94 chr2L 10912986 intergenic not near genes chr2L 10913033 intergenic not near genes chr2L 10913080 intergenic not near genes chr2L_8_10910001 chr2L_10910001 RAL-796 173 chr2L 10946949 10946974 chr2L 10956164 10956189 roo 10 9214 3.0 7.0 5.0 1.7 9240 chr2L 10946949 intron dpr2 - chr2L 10951569 intron dpr2 - chr2L 10956189 intron dpr2 - chr2L_10_10950001 chr2L_10950001 RAL-796 174 chr2L 11036327 11036360 chr2L 11036409 11036442 13 82 3.5 4.5 4.0 2.6 115 chr2L 11036327 intron Samuel - chr2L 11036384 intron Samuel - chr2L 11036442 intron Samuel - chr2L_13_11035001 chr2L_11035001 RAL-796 175 chr2L 11100589 11100609 chr2L 11100679 11100699 4 90 16.0 17.0 16.5 0.2 110 chr2L 11100589 5` UTR Ge-1 - chr2L 11100644 5` UTR Ge-1 - chr2L 11100699 5` UTR Ge-1 - chr2L_4_11100001 chr2L_11100001 RAL-796 176 chr2L 11111940 11111967 chr2L 11119385 11119403 4 7438 13.0 23.5 18.2 0.2 7463 chr2L 11111940 intron CG6201 - chr2L 11115672 exon,3` UTR Gr32a +,CG6230 - chr2L 11119403 exon CG6230 - chr2L_4_11115001 chr2L_11115001 RAL-796 177 chr2L 11183794 11183807 chr2L 11183890 11183903 4 96 3.0 3.5 3.2 1.0 109 chr2L 11183794 intron Ca-beta - chr2L 11183848 intron Ca-beta - chr2L 11183903 intron Ca-beta - chr2L_4_11180001 chr2L_11180001 RAL-796 178 chr2L 11203383 11203400 chr2L 11203463 11203481 4 80 4.5 2.0 3.2 1.0 98 chr2L 11203383 5` UTR Ca-beta - chr2L 11203432 5` UTR Ca-beta - chr2L 11203481 5` UTR Ca-beta - chr2L_4_11200001 chr2L_11200001 RAL-796 179 chr2L 11224056 11224091 chr2L 11224167 11224202 12 111 2.5 1.5 2.0 4.0 146 chr2L 11224056 intron ab + chr2L 11224129 intron ab + chr2L 11224202 intron ab + chr2L_12_11220001 chr2L_11220001 RAL-796 180 chr2L 11292398 11292405 chr2L 11292480 11292487 4 82 2.0 5.5 3.8 0.8 89 chr2L 11292398 intergenic not near genes chr2L 11292442 intergenic not near genes chr2L 11292487 intergenic not near genes chr2L_4_11290001 chr2L_11290001 RAL-796 181 chr2L 11418665 11418681 chr2L 11418744 11418760 5 79 11.0 12.0 11.5 0.4 95 chr2L 11418665 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418760 intergenic not near genes chr2L_5_11415001 chr2L_11415001 RAL-796 182 chr2L 11443180 11443200 chr2L 11443273 11443293 5 93 3.0 1.0 2.0 1.7 113 chr2L 11443180 intron salm - chr2L 11443236 intron salm - chr2L 11443293 intron salm - chr2L_5_11440001 chr2L_11440001 RAL-796 183 chr2L 11540590 11540616 chr2L 11547992 11548018 Tabor 4 7402 1.0 3.5 2.2 1.2 7428 chr2L 11540590 intergenic not near genes chr2L 11544304 intergenic not near genes chr2L 11548018 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-796 184 chr2L 11563639 11563670 chr2L 11568841 11568874 copia 11 5204 3.0 1.0 2.0 3.7 5235 chr2L 11563639 intergenic not near genes chr2L 11566256 intergenic not near genes chr2L 11568874 intergenic not near genes chr2L_11_11565001 chr2L_11565001 RAL-796 185 chr2L 11612662 11612691 chr2L 11612750 11612779 9 87 7.5 10.0 8.8 0.9 117 chr2L 11612662 intron kek2 + chr2L 11612720 intron kek2 + chr2L 11612779 intron kek2 + chr2L_9_11610001 chr2L_11610001 RAL-796 186 chr2L 11614059 11614085 chr2L 11615547 11615580 hopper2 5 1487 2.0 2.0 2.0 1.7 1521 chr2L 11614059 intron kek2 + chr2L 11614820 intron kek2 + chr2L 11615580 intron kek2 + chr2L_5_11610001 chr2L_11610001 RAL-796 187 chr2L 11661186 11661206 chr2L 11661273 11661293 6 86 7.0 6.5 6.8 0.8 107 chr2L 11661186 intergenic CR44497 - chr2L 11661240 intergenic CR44497 -,CR44479 - chr2L 11661293 intergenic CR44497 -,CR44479 - chr2L_6_11660001 chr2L_11660001 RAL-796 188 chr2L 11713507 11713540 chr2L 11720975 11721008 blood 10 7468 4.0 6.0 5.0 1.7 7501 chr2L 11713507 intergenic not near genes chr2L 11717258 intergenic not near genes chr2L 11721008 intergenic CR44143 + chr2L_10_11715001 chr2L_11715001 RAL-796 189 chr2L 12022084 12022099 chr2L 12022759 12022774 4 675 16.5 16.0 16.2 0.2 690 chr2L 12022084 intergenic not near genes chr2L 12022429 intergenic not near genes chr2L 12022774 intergenic not near genes chr2L_4_12020001 chr2L_12020001 RAL-796 190 chr2L 12153933 12153959 chr2L 12154010 12154036 6 77 2.0 3.5 2.8 1.6 103 chr2L 12153933 exon CG31760 + chr2L 12153984 intron CG31760 + chr2L 12154036 intron CG31760 + chr2L_6_12150001 chr2L_12150001 RAL-796 191 chr2L 12234044 12234065 chr2L 12234139 12234160 5 95 9.5 8.5 9.0 0.5 116 chr2L 12234044 intron aret + chr2L 12234102 intron aret + chr2L 12234160 intron aret + chr2L_5_12230001 chr2L_12230001 RAL-796 192 chr2L 12305410 12305436 chr2L 12305497 12305524 7 88 8.0 7.0 7.5 0.8 114 chr2L 12305410 intron aret + chr2L 12305467 intron aret + chr2L 12305524 intron aret + chr2L_7_12305001 chr2L_12305001 RAL-796 193 chr2L 12349633 12349654 chr2L 12349727 12349748 5 94 3.0 5.0 4.0 1.0 115 chr2L 12349633 intron bru-2 + chr2L 12349690 intron bru-2 + chr2L 12349748 intron bru-2 + chr2L_5_12345001 chr2L_12345001 RAL-796 194 chr2L 12397612 12397639 chr2L 12397932 12397958 5 320 5.0 9.0 7.0 0.6 346 chr2L 12397612 intergenic bru-2 + chr2L 12397785 intergenic bru-2 +,Pkd2 + chr2L 12397958 intergenic Pkd2 +,bru-2 + chr2L_5_12395001 chr2L_12395001 RAL-796 195 chr2L 12411010 12411038 chr2L 12411086 12411117 7 79 8.0 8.5 8.2 0.8 107 chr2L 12411010 intron vir-1 - chr2L 12411064 intron vir-1 - chr2L 12411117 intron vir-1 - chr2L_7_12410001 chr2L_12410001 RAL-796 196 chr2L 12487884 12487918 chr2L 12487965 12487999 15 81 6.0 3.5 4.8 2.6 115 chr2L 12487884 intron bun - chr2L 12487942 intron bun - chr2L 12487999 intron bun - chr2L_15_12485001 chr2L_12485001 RAL-796 197 chr2L 12529244 12529445 chr2L 12529377 12529521 8 104 10.5 5.0 7.8 0.9 277 chr2L 12529244 intron bun - chr2L 12529382 intron bun - chr2L 12529521 intron bun - chr2L_8_12525001 chr2L_12525001 RAL-796 198 chr2L 12638788 12638805 chr2L 12638891 12638902 4 102 1.0 4.5 2.8 1.1 114 chr2L 12638788 intron Ref2 - chr2L 12638845 intron Ref2 - chr2L 12638902 intron Ref2 - chr2L_4_12635001 chr2L_12635001 RAL-796 199 chr2L 12682874 12682903 chr2L 12682953 12682982 7 79 9.0 7.5 8.2 0.8 108 chr2L 12682874 intron pdm2 + chr2L 12682928 intron pdm2 + chr2L 12682982 intron pdm2 + chr2L_7_12680001 chr2L_12680001 RAL-796 200 chr2L 12728930 12728946 chr2L 12729167 12729185 pogo 5 239 3.0 4.5 3.8 1.0 255 chr2L 12728930 intron MRP + chr2L 12729058 intron MRP + chr2L 12729185 exon MRP + chr2L_5_12725001 chr2L_12725001 RAL-796 201 chr2L 12731054 12731092 chr2L 12735821 12735859 F-element 7 4767 2.0 0.5 1.2 3.2 4805 chr2L 12731054 intron MRP + chr2L 12733456 intron MRP + chr2L 12735859 intron MRP + chr2L_7_12730001 chr2L_12730001 RAL-796 202 chr2L 12739173 12739203 chr2L 12743954 12743984 Doc 14 4781 1.5 3.5 2.5 4.0 4811 chr2L 12739173 exon MRP + chr2L 12741578 intron MRP + chr2L 12743984 exon MRP + chr2L_14_12740001 chr2L_12740001 RAL-796 203 chr2L 12751312 12751334 chr2L 12751395 12751417 8 83 0.5 4.5 2.5 2.3 105 chr2L 12751312 intergenic not near genes chr2L 12751364 intergenic not near genes chr2L 12751417 intergenic not near genes chr2L_8_12750001 chr2L_12750001 RAL-796 204 chr2L 12781800 12781814 chr2L 12789248 12789264 Quasimodo 7 7450 6.0 4.0 5.0 1.2 7464 chr2L 12781800 intergenic not near genes chr2L 12785532 intergenic not near genes chr2L 12789264 intergenic not near genes chr2L_7_12785001 chr2L_12785001 RAL-796 205 chr2L 12791624 12791629 chr2L 12795277 12795295 F-element 5 3658 0.0 1.5 0.8 2.8 3671 chr2L 12791624 intergenic not near genes chr2L 12793460 intergenic not near genes chr2L 12795295 intergenic not near genes chr2L_5_12790001 chr2L_12790001 RAL-796 206 chr2L 12861694 12861720 chr2L 12863161 12863187 hobo 9 1467 1.5 2.5 2.0 3.0 1493 chr2L 12861694 intergenic not near genes chr2L 12862440 intergenic not near genes chr2L 12863187 intergenic not near genes chr2L_9_12860001 chr2L_12860001 RAL-796 207 chr2L 12894023 12894054 chr2L 12895490 12895516 hobo 5 1466 4.5 5.0 4.8 0.9 1493 chr2L 12894023 intergenic not near genes chr2L 12894770 intergenic not near genes chr2L 12895516 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-796 208 chr2L 12933849 12933877 chr2L 12941316 12941342 blood 12 7467 4.5 4.5 4.5 2.2 7493 chr2L 12933849 intergenic not near genes chr2L 12937596 intergenic not near genes chr2L 12941342 intergenic not near genes chr2L_12_12935001 chr2L_12935001 RAL-796 209 chr2L 12956154 12956189 chr2L 12956242 12956277 4 88 9.5 11.0 10.2 0.4 123 chr2L 12956154 intergenic not near genes chr2L 12956216 intergenic not near genes chr2L 12956277 intergenic not near genes chr2L_4_12955001 chr2L_12955001 RAL-796 210 chr2L 13036250 13036267 chr2L 13036492 13036509 X-element 4 242 8.0 4.5 6.2 0.6 259 chr2L 13036250 intron CG9932 - chr2L 13036380 intron CG9932 - chr2L 13036509 intron CG9932 - chr2L_4_13035001 chr2L_13035001 RAL-796 211 chr2L 13088955 13088977 chr2L 13089035 13089057 9 79 12.0 14.0 13.0 0.6 102 chr2L 13088955 intergenic not near genes chr2L 13089006 intergenic not near genes chr2L 13089057 intergenic not near genes chr2L_9_13085001 chr2L_13085001 RAL-796 212 chr2L 13185323 13185350 chr2L 13185402 13185429 6 78 10.0 14.0 12.0 0.5 106 chr2L 13185323 3` UTR CG16974 - chr2L 13185376 3` UTR CG16974 - chr2L 13185429 exon CG16974 - chr2L_6_13185001 chr2L_13185001 RAL-796 213 chr2L 13405652 13405683 chr2L 13410449 13410480 Doc 14 4797 3.0 4.0 3.5 3.1 4828 chr2L 13405652 exon CG7110 + chr2L 13408066 intron CG7110 + chr2L 13410480 intron CG7110 + chr2L_14_13405001 chr2L_13405001 RAL-796 214 chr2L 13422488 13422505 chr2L 13422567 13422584 6 79 0.0 2.5 1.2 2.7 96 chr2L 13422488 intron CG42784 + chr2L 13422536 intron CG42784 + chr2L 13422584 intron CG42784 + chr2L_6_13420001 chr2L_13420001 RAL-796 215 chr2L 13449467 13449496 chr2L 13456903 13456931 Quasimodo 5 7436 1.5 5.0 3.2 1.2 7464 chr2L 13449467 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453199 intron CG42784 + chr2L 13456931 intron CG42784 + chr2L_5_13450001 chr2L_13450001 RAL-796 216 chr2L 13481454 13481474 chr2L 13482061 13482081 jockey 5 607 7.0 6.5 6.8 0.6 627 chr2L 13481454 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482081 intron CG42784 + chr2L_5_13480001 chr2L_13480001 RAL-796 217 chr2L 13493777 13493810 chr2L 13493871 13493904 6 94 9.0 11.5 10.2 0.5 127 chr2L 13493777 intron CG42784 + chr2L 13493840 intron CG42784 + chr2L 13493904 intron CG42784 + chr2L_6_13490001 chr2L_13490001 RAL-796 218 chr2L 13620118 13620139 chr2L 13620344 13620365 7 226 7.5 11.0 9.2 0.7 247 chr2L 13620118 intron kuz + chr2L 13620242 intron kuz + chr2L 13620365 intron kuz + chr2L_7_13620001 chr2L_13620001 RAL-796 219 chr2L 13622136 13622170 chr2L 13622234 13622253 10 96 5.5 3.5 4.5 1.8 117 chr2L 13622136 intron kuz + chr2L 13622194 intron kuz + chr2L 13622253 intron kuz + chr2L_10_13620001 chr2L_13620001 RAL-796 220 chr2L 13692162 13692187 chr2L 13692238 13692263 7 76 5.5 5.0 5.2 1.1 101 chr2L 13692162 intron CG31814 - chr2L 13692212 intron CG31814 - chr2L 13692263 intron CG31814 - chr2L_7_13690001 chr2L_13690001 RAL-796 221 chr2L 13757014 13757045 chr2L 13757108 13757129 7 92 9.0 8.0 8.5 0.7 115 chr2L 13757014 intron TM9SF4 + chr2L 13757072 intron TM9SF4 + chr2L 13757129 intron TM9SF4 + chr2L_7_13755001 chr2L_13755001 RAL-796 222 chr2L 13761807 13761835 chr2L 13762918 13762946 Doc 9 1111 5.5 5.5 5.5 1.4 1139 chr2L 13761807 intron TM9SF4 + chr2L 13762376 intron TM9SF4 + chr2L 13762946 intron TM9SF4 + chr2L_9_13760001 chr2L_13760001 RAL-796 223 chr2L 13853087 13853116 chr2L 13862237 13862266 roo 9 9150 4.5 2.5 3.5 2.0 9179 chr2L 13853087 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862266 intron CenG1A + chr2L_9_13855001 chr2L_13855001 RAL-796 224 chr2L 13977795 13977816 chr2L 13978123 13978144 4 328 5.5 4.5 5.0 0.7 349 chr2L 13977795 exon Cyp28a5 + chr2L 13977970 intron Cyp28a5 + chr2L 13978144 intron Cyp28a5 + chr2L_4_13975001 chr2L_13975001 RAL-796 225 chr2L 13988283 13988389 chr2L 13988370 13988470 11 83 3.0 1.5 2.2 3.4 187 chr2L 13988283 intron rk - chr2L 13988376 intron rk - chr2L 13988470 intron rk - chr2L_11_13985001 chr2L_13985001 RAL-796 226 chr2L 13988616 13988646 chr2L 13988708 13988737 9 92 9.0 10.5 9.8 0.8 121 chr2L 13988616 intron rk - chr2L 13988676 intron rk - chr2L 13988737 intron rk - chr2L_9_13985001 chr2L_13985001 RAL-796 227 chr2L 13995080 13995100 chr2L 13997214 13997234 4 2134 8.0 19.5 13.8 0.3 2154 chr2L 13995080 intron rk - chr2L 13996157 intron rk - chr2L 13997234 intron rk - chr2L_4_13995001 chr2L_13995001 RAL-796 228 chr2L 14180070 14180088 chr2L 14180146 14180164 7 76 6.0 6.0 6.0 1.0 94 chr2L 14180070 intron CG43333 - chr2L 14180117 intron CG43333 - chr2L 14180164 intron CG43333 - chr2L_7_14180001 chr2L_14180001 RAL-796 229 chr2L 14237131 14237161 chr2L 14237217 14237247 7 86 4.0 5.5 4.8 1.2 116 chr2L 14237131 intergenic not near genes chr2L 14237189 intergenic not near genes chr2L 14237247 intergenic not near genes chr2L_7_14235001 chr2L_14235001 RAL-796 230 chr2L 14246286 14246315 chr2L 14246364 14246393 10 78 0.0 0.0 0.0 10.0 107 chr2L 14246286 intergenic not near genes chr2L 14246340 intergenic not near genes chr2L 14246393 intergenic not near genes chr2L_10_14245001 chr2L_14245001 RAL-796 231 chr2L 14408779 14408809 chr2L 14408979 14409007 5 198 7.0 7.0 7.0 0.6 228 chr2L 14408779 5` UTR elB - chr2L 14408893 5` UTR elB - chr2L 14409007 5` UTR elB - chr2L_5_14405001 chr2L_14405001 RAL-796 232 chr2L 14429439 14429456 chr2L 14429520 14429534 5 80 2.5 0.0 1.2 2.3 95 chr2L 14429439 3` UTR CR44732 - chr2L 14429486 3` UTR CR44732 - chr2L 14429534 3` UTR CR44732 - chr2L_5_14425001 chr2L_14425001 RAL-796 233 chr2L 14564198 14564230 chr2L 14564274 14564286 9 69 1.5 1.5 1.5 3.6 88 chr2L 14564198 intergenic CG3473 - chr2L 14564242 intergenic not near genes chr2L 14564286 intergenic not near genes chr2L_9_14560001 chr2L_14560001 RAL-796 234 chr2L 14588383 14588418 chr2L 14588535 14588572 12 154 2.0 3.0 2.5 3.4 189 chr2L 14588383 intergenic CG42680 - chr2L 14588478 intergenic CG42680 - chr2L 14588572 intergenic CG42680 - chr2L_12_14585001 chr2L_14585001 RAL-796 235 chr2L 14613286 14613293 chr2L 14613504 14613533 4 234 2.0 2.0 2.0 1.3 247 chr2L 14613286 intron,5` UTR osp -,CR43411 + chr2L 14613410 intron,5` UTR osp -,CR43411 + chr2L 14613533 intron,5` UTR osp -,CR43411 + chr2L_4_14610001 chr2L_14610001 RAL-796 236 chr2L 14633470 14633481 chr2L 14633529 14633559 8 76 3.5 8.0 5.8 1.2 89 chr2L 14633470 intron osp - chr2L 14633514 intron osp - chr2L 14633559 intron osp - chr2L_8_14630001 chr2L_14630001 RAL-796 237 chr2L 14642568 14642601 chr2L 14651731 14651764 roo 9 9163 3.0 4.0 3.5 2.0 9196 chr2L 14642568 intron osp - chr2L 14647166 intron osp - chr2L 14651764 intron osp - chr2L_9_14645001 chr2L_14645001 RAL-796 238 chr2L 14680237 14680261 chr2L 14680846 14680870 7 608 2.0 4.0 3.0 1.8 633 chr2L 14680237 intron osp - chr2L 14680554 intron osp - chr2L 14680870 intron osp - chr2L_7_14680001 chr2L_14680001 RAL-796 239 chr2L 14707208 14707231 chr2L 14707327 14707350 6 119 5.0 2.0 3.5 1.3 142 chr2L 14707208 intergenic not near genes chr2L 14707279 intergenic not near genes chr2L 14707350 intergenic not near genes chr2L_6_14705001 chr2L_14705001 RAL-796 240 chr2L 14744616 14744642 chr2L 14744703 14744729 4 87 1.0 1.5 1.2 1.8 113 chr2L 14744616 exon CG42681 + chr2L 14744672 exon CG42681 + chr2L 14744729 exon CG42681 + chr2L_4_14740001 chr2L_14740001 RAL-796 241 chr2L 14757590 14757595 chr2L 14757780 14757785 5 190 2.5 1.5 2.0 1.7 195 chr2L 14757590 intergenic not near genes chr2L 14757688 intergenic not near genes chr2L 14757785 intergenic not near genes chr2L_5_14755001 chr2L_14755001 RAL-796 242 chr2L 14803879 14803912 chr2L 14809081 14809115 copia 16 5202 5.5 5.5 5.5 2.5 5236 chr2L 14803879 intergenic not near genes chr2L 14806497 intergenic not near genes chr2L 14809115 intergenic not near genes chr2L_16_14805001 chr2L_14805001 RAL-796 243 chr2L 14840976 14841010 chr2L 14841063 14841097 6 87 0.0 1.5 0.8 3.3 121 chr2L 14840976 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841097 3` UTR CR43805 - chr2L_6_14840001 chr2L_14840001 RAL-796 244 chr2L 14889952 14889988 chr2L 14890377 14890412 jockey 7 425 3.5 4.0 3.8 1.5 460 chr2L 14889952 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890412 intergenic not near genes chr2L_7_14890001 chr2L_14890001 RAL-796 245 chr2L 14930334 14930359 chr2L 14930411 14930436 8 77 1.5 3.0 2.2 2.5 102 chr2L 14930334 intron,3` UTR CG42313 -,CG3491 + chr2L 14930385 intron,3` UTR CG42313 -,CG3491 + chr2L 14930436 intron,3` UTR CG42313 -,CG3491 + chr2L_8_14930001 chr2L_14930001 RAL-796 246 chr2L 14941974 14941996 chr2L 14942076 14942099 6 103 1.0 0.5 0.8 3.3 125 chr2L 14941974 intron CG42313 - chr2L 14942036 intron CG42313 - chr2L 14942099 intron CG42313 - chr2L_6_14940001 chr2L_14940001 RAL-796 247 chr2L 14984386 14984402 chr2L 14991988 14992004 opus 4 7602 2.0 4.0 3.0 1.0 7618 chr2L 14984386 intron mol - chr2L 14988195 intron mol - chr2L 14992004 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-796 248 chr2L 15021440 15021472 chr2L 15021516 15021548 9 76 1.0 1.5 1.2 4.1 108 chr2L 15021440 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021548 intron GABA-B-R1 + chr2L_9_15020001 chr2L_15020001 RAL-796 249 chr2L 15022904 15022936 chr2L 15023011 15023043 12 106 4.0 2.5 3.2 2.9 139 chr2L 15022904 intron GABA-B-R1 + chr2L 15022974 intron GABA-B-R1 + chr2L 15023043 intron GABA-B-R1 + chr2L_12_15020001 chr2L_15020001 RAL-796 250 chr2L 15031554 15031574 chr2L 15031794 15031813 14 239 9.0 2.0 5.5 2.2 259 chr2L 15031554 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031684 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031813 intron GABA-B-R1 + chr2L_14_15030001 chr2L_15030001 RAL-796 251 chr2L 15044709 15044731 chr2L 15044785 15044807 5 76 4.5 0.0 2.2 1.6 98 chr2L 15044709 intergenic ck - chr2L 15044758 intergenic ck - chr2L 15044807 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-796 252 chr2L 15077904 15078101 chr2L 15077991 15078188 11 87 1.0 3.0 2.0 3.7 284 chr2L 15077904 intron CG15270 + chr2L 15078046 intron CG15270 + chr2L 15078188 intron CG15270 + chr2L_11_15075001 chr2L_15075001 RAL-796 253 chr2L 15196737 15196766 chr2L 15196821 15196848 15 84 5.0 8.5 6.8 1.9 111 chr2L 15196737 intron CG4168 - chr2L 15196792 intron CG4168 - chr2L 15196848 intron CG4168 - chr2L_15_15195001 chr2L_15195001 RAL-796 254 chr2L 15204836 15204870 chr2L 15204978 15205011 13 142 4.0 2.5 3.2 3.1 175 chr2L 15204836 intergenic not near genes chr2L 15204924 intergenic not near genes chr2L 15205011 intergenic not near genes chr2L_13_15200001 chr2L_15200001 RAL-796 255 chr2L 15305485 15305518 chr2L 15305577 15305607 10 91 5.0 2.0 3.5 2.2 122 chr2L 15305485 intergenic not near genes chr2L 15305546 intergenic not near genes chr2L 15305607 intergenic not near genes chr2L_10_15305001 chr2L_15305001 RAL-796 256 chr2L 15309350 15309381 chr2L 15309453 15309484 4 103 0.5 1.5 1.0 2.0 134 chr2L 15309350 intergenic not near genes chr2L 15309417 intergenic not near genes chr2L 15309484 intergenic not near genes chr2L_4_15305001 chr2L_15305001 RAL-796 257 chr2L 15332239 15332242 chr2L 15332599 15332603 4 361 3.5 0.0 1.8 1.4 364 chr2L 15332239 intergenic not near genes chr2L 15332421 intergenic not near genes chr2L 15332603 intergenic not near genes chr2L_4_15330001 chr2L_15330001 RAL-796 258 chr2L 15343538 15343566 chr2L 15343623 15343651 5 85 2.0 0.0 1.0 2.5 113 chr2L 15343538 intergenic not near genes chr2L 15343594 intergenic not near genes chr2L 15343651 intergenic not near genes chr2L_5_15340001 chr2L_15340001 RAL-796 259 chr2L 15446051 15446079 chr2L 15453520 15453548 blood 7 7469 1.5 3.0 2.2 2.2 7497 chr2L 15446051 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453548 intergenic not near genes chr2L_7_15445001 chr2L_15445001 RAL-796 260 chr2L 15544383 15544412 chr2L 15544458 15544488 8 74 3.5 4.0 3.8 1.7 105 chr2L 15544383 intergenic not near genes chr2L 15544436 intergenic not near genes chr2L 15544488 intergenic not near genes chr2L_8_15540001 chr2L_15540001 RAL-796 261 chr2L 15586412 15586442 chr2L 15593465 15593494 297 5 7052 1.5 2.5 2.0 1.7 7082 chr2L 15586412 intergenic not near genes chr2L 15589953 intergenic not near genes chr2L 15593494 intergenic not near genes chr2L_5_15585001 chr2L_15585001 RAL-796 262 chr2L 15812664 15812693 chr2L 15812801 15812832 16 139 1.5 4.0 2.8 4.2 168 chr2L 15812664 intergenic not near genes chr2L 15812748 intergenic not near genes chr2L 15812832 intergenic not near genes chr2L_16_15810001 chr2L_15810001 RAL-796 263 chr2L 15928418 15928444 chr2L 15928506 15928532 4 88 0.5 1.5 1.0 2.0 114 chr2L 15928418 intron beat-Ib - chr2L 15928475 intron beat-Ib - chr2L 15928532 intron beat-Ib - chr2L_4_15925001 chr2L_15925001 RAL-796 264 chr2L 15947743 15947773 chr2L 15948366 15948397 5 624 3.5 2.0 2.8 1.3 654 chr2L 15947743 intron beat-Ib - chr2L 15948070 intron beat-Ib - chr2L 15948397 intron beat-Ib - chr2L_5_15945001 chr2L_15945001 RAL-796 265 chr2L 15950383 15950417 chr2L 15950461 15950491 6 77 0.5 0.0 0.2 5.0 108 chr2L 15950383 intron beat-Ib - chr2L 15950437 intron beat-Ib - chr2L 15950491 intron beat-Ib - chr2L_6_15950001 chr2L_15950001 RAL-796 266 chr2L 15956025 15956054 chr2L 15957489 15957521 hobo 8 1466 2.0 2.0 2.0 2.7 1496 chr2L 15956025 intron beat-Ib - chr2L 15956773 intron beat-Ib - chr2L 15957521 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-796 267 chr2L 16005628 16005660 chr2L 16005737 16005769 8 108 0.0 1.0 0.5 5.3 141 chr2L 16005628 intron beat-Ic + chr2L 16005698 intron beat-Ic + chr2L 16005769 intron beat-Ic + chr2L_8_16005001 chr2L_16005001 RAL-796 268 chr2L 16058124 16058149 chr2L 16058265 16058290 6 141 3.5 0.5 2.0 2.0 166 chr2L 16058124 intron beat-Ia + chr2L 16058207 intron beat-Ia + chr2L 16058290 intron beat-Ia + chr2L_6_16055001 chr2L_16055001 RAL-796 269 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 10 145889 16.0 20.5 18.2 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-796 270 chr2L 16094853 16094873 chr2L 16094973 16094993 4 120 5.0 3.0 4.0 0.8 140 chr2L 16094853 intergenic CG4891 + chr2L 16094923 intergenic CG4891 + chr2L 16094993 intergenic CG4891 + chr2L_4_16090001 chr2L_16090001 RAL-796 271 chr2L 16141166 16141195 chr2L 16146373 16146402 copia 6 5207 3.0 4.5 3.8 1.2 5236 chr2L 16141166 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146402 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-796 272 chr2L 16153745 16153762 chr2L 16160813 16160830 297 8 7068 3.0 2.0 2.5 2.3 7085 chr2L 16153745 intergenic not near genes chr2L 16157288 intergenic not near genes chr2L 16160830 intergenic not near genes chr2L_8_16155001 chr2L_16155001 RAL-796 273 chr2L 16195910 16195921 chr2L 16195987 16195987 4 74 3.5 2.5 3.0 1.0 77 chr2L 16195910 3` UTR CR44735 - chr2L 16195948 3` UTR CR44735 - chr2L 16195987 3` UTR CR44735 - chr2L_4_16195001 chr2L_16195001 RAL-796 274 chr2L 9084336 9084340 chr2L 16217660 16217660 8 7133321 8.5 20.5 14.5 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-796 275 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 6 145889 16.0 20.5 18.2 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-796 276 chr2L 16280250 16280288 chr2L 16281418 16281456 1360 7 1165 4.5 4.5 4.5 1.3 1206 chr2L 16280250 intron crp - chr2L 16280853 intron crp - chr2L 16281456 intron crp - chr2L_7_16280001 chr2L_16280001 RAL-796 277 chr2L 16363944 16363973 chr2L 16364190 16364219 5 245 2.5 0.5 1.5 2.0 275 chr2L 16363944 intergenic not near genes chr2L 16364082 intergenic not near genes chr2L 16364219 intergenic not near genes chr2L_5_16360001 chr2L_16360001 RAL-796 278 chr2L 16375393 16375399 chr2L 16375484 16375490 4 91 6.5 0.0 3.2 1.0 97 chr2L 16375393 intergenic not near genes chr2L 16375442 intergenic not near genes chr2L 16375490 intergenic not near genes chr2L_4_16375001 chr2L_16375001 RAL-796 279 chr2L 16407414 16407422 chr2L 16407544 16407552 6 130 3.0 1.5 2.2 1.9 138 chr2L 16407414 intron CG5888 - chr2L 16407483 intron CG5888 - chr2L 16407552 intron CG5888 - chr2L_6_16405001 chr2L_16405001 RAL-796 280 chr2L 16450435 16450461 chr2L 16450513 16450538 4 78 2.5 0.5 1.5 1.6 103 chr2L 16450435 exon Idgf2 + chr2L 16450486 3` UTR Idgf2 + chr2L 16450538 intergenic Idgf2 + chr2L_4_16450001 chr2L_16450001 RAL-796 281 chr2L 16504989 16505014 chr2L 16505099 16505124 10 110 0.0 0.5 0.2 8.3 135 chr2L 16504989 intron Tpr2 + chr2L 16505056 intron Tpr2 + chr2L 16505124 intron Tpr2 + chr2L_10_16505001 chr2L_16505001 RAL-796 282 chr2L 16585790 16585816 chr2L 16585879 16585905 4 88 2.5 3.0 2.8 1.1 115 chr2L 16585790 intron CG42389 + chr2L 16585848 intron CG42389 + chr2L 16585905 intron CG42389 + chr2L_4_16585001 chr2L_16585001 RAL-796 283 chr2L 16764978 16765000 chr2L 16765058 16765080 5 80 2.5 1.0 1.8 1.8 102 chr2L 16764978 intergenic not near genes chr2L 16765029 intergenic not near genes chr2L 16765080 intergenic not near genes chr2L_5_16765001 chr2L_16765001 RAL-796 284 chr2L 16798953 16798981 chr2L 16801453 16801460 9 2498 11.5 15.0 13.2 0.6 2507 chr2L 16798953 intergenic Ugt36Bc + chr2L 16800206 exon Ugt36Bc + chr2L 16801460 exon Ugt36Bc + chr2L_9_16800001 chr2L_16800001 RAL-796 285 chr2L 16798913 16798946 chr2L 16801831 16801864 10 2919 17.0 14.5 15.8 0.6 2951 chr2L 16798913 intergenic Ugt36Bc + chr2L 16800388 exon Ugt36Bc + chr2L 16801864 intergenic CG13280 -,Ugt36Bc + chr2L_10_16800001 chr2L_16800001 RAL-796 286 chr2L 16958101 16958134 chr2L 16962889 16962922 Doc 8 4788 1.5 2.5 2.0 2.7 4821 chr2L 16958101 intergenic not near genes chr2L 16960512 intergenic not near genes chr2L 16962922 intergenic not near genes chr2L_8_16960001 chr2L_16960001 RAL-796 287 chr2L 16999046 16999074 chr2L 16999137 16999165 5 91 1.5 0.0 0.8 2.8 119 chr2L 16999046 intergenic CR45357 +,CR45356 + chr2L 16999106 intergenic CR45357 + chr2L 16999165 intergenic CR45357 + chr2L_5_16995001 chr2L_16995001 RAL-796 288 chr2L 17002072 17002086 chr2L 17002336 17002350 4 264 1.0 1.0 1.0 2.0 278 chr2L 17002072 intergenic not near genes chr2L 17002211 intergenic not near genes chr2L 17002350 intergenic not near genes chr2L_4_17000001 chr2L_17000001 RAL-796 289 chr2L 17050016 17050049 chr2L 17050102 17050133 6 83 0.0 4.0 2.0 2.0 117 chr2L 17050016 intergenic not near genes chr2L 17050074 intergenic not near genes chr2L 17050133 intergenic not near genes chr2L_6_17050001 chr2L_17050001 RAL-796 290 chr2L 17062757 17062791 chr2L 17062839 17062873 4 82 0.0 0.5 0.2 3.3 116 chr2L 17062757 intergenic not near genes chr2L 17062815 intergenic not near genes chr2L 17062873 intergenic not near genes chr2L_4_17060001 chr2L_17060001 RAL-796 291 chr2L 17069253 17069275 chr2L 17069330 17069352 7 77 2.0 0.0 1.0 3.5 99 chr2L 17069253 intergenic not near genes chr2L 17069302 intergenic not near genes chr2L 17069352 intergenic not near genes chr2L_7_17065001 chr2L_17065001 RAL-796 292 chr2L 17119628 17119648 chr2L 17119780 17119812 6 161 1.5 1.5 1.5 2.4 184 chr2L 17119628 intergenic not near genes chr2L 17119720 intergenic not near genes chr2L 17119812 intergenic not near genes chr2L_6_17115001 chr2L_17115001 RAL-796 293 chr2L 17122775 17122802 chr2L 17122860 17122887 7 83 2.0 1.5 1.8 2.5 112 chr2L 17122775 intergenic not near genes chr2L 17122831 intergenic CG31784 - chr2L 17122887 intergenic CG31784 - chr2L_7_17120001 chr2L_17120001 RAL-796 294 chr2L 17129844 17129872 chr2L 17129949 17129977 10 104 2.0 1.5 1.8 3.6 133 chr2L 17129844 intergenic not near genes chr2L 17129910 intergenic not near genes chr2L 17129977 intergenic not near genes chr2L_10_17125001 chr2L_17125001 RAL-796 295 chr2L 17142322 17142345 chr2L 17142528 17142550 9 205 3.5 3.0 3.2 2.1 228 chr2L 17142322 intron,intron CG34106 +,beat-IIIa + chr2L 17142436 intron,intron CG34106 +,beat-IIIa + chr2L 17142550 intron,intron CG34106 +,beat-IIIa + chr2L_9_17140001 chr2L_17140001 RAL-796 296 chr2L 17158726 17158754 chr2L 17158829 17158857 7 103 1.5 0.5 1.0 3.5 131 chr2L 17158726 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158792 intron,intron CG34106 +,beat-IIIa + chr2L 17158857 intron,intron CG34106 +,beat-IIIa + chr2L_7_17155001 chr2L_17155001 RAL-796 297 chr2L 17167574 17167592 chr2L 17167815 17167833 pogo 5 241 1.5 2.5 2.0 1.7 259 chr2L 17167574 intron,intron CG34106 +,beat-IIIa + chr2L 17167704 intron,intron CG34106 +,beat-IIIa + chr2L 17167833 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-796 298 chr2L 17237627 17237644 chr2L 17237729 17237746 6 102 4.5 2.0 3.2 1.4 119 chr2L 17237627 intron beat-IIIc - chr2L 17237686 intron beat-IIIc - chr2L 17237746 intron beat-IIIc - chr2L_6_17235001 chr2L_17235001 RAL-796 299 chr2L 17260882 17260899 chr2L 17260965 17260982 5 83 2.5 1.5 2.0 1.7 100 chr2L 17260882 intergenic beat-IIIc - chr2L 17260932 intergenic beat-IIIc - chr2L 17260982 intergenic beat-IIIc - chr2L_5_17260001 chr2L_17260001 RAL-796 300 chr2L 17271146 17271166 chr2L 17271289 17271309 7 143 7.0 2.5 4.8 1.2 163 chr2L 17271146 intergenic not near genes chr2L 17271228 intergenic not near genes chr2L 17271309 intergenic not near genes chr2L_7_17270001 chr2L_17270001 RAL-796 301 chr2L 17273193 17273229 chr2L 17277976 17278012 F-element 19 4783 2.5 4.0 3.2 4.5 4819 chr2L 17273193 intergenic not near genes chr2L 17275602 intergenic not near genes chr2L 17278012 intergenic not near genes chr2L_19_17275001 chr2L_17275001 RAL-796 302 chr2L 17287335 17287352 chr2L 17287582 17287599 4 247 1.5 0.5 1.0 2.0 264 chr2L 17287335 exon CG15140 + chr2L 17287467 3` UTR CG15140 + chr2L 17287599 3` UTR CG15140 + chr2L_4_17285001 chr2L_17285001 RAL-796 303 chr2L 17307208 17307243 chr2L 17307331 17307367 9 120 0.5 0.5 0.5 6.0 159 chr2L 17307208 intergenic not near genes chr2L 17307288 intergenic not near genes chr2L 17307367 intergenic not near genes chr2L_9_17305001 chr2L_17305001 RAL-796 304 chr2L 17327911 17327921 chr2L 17327997 17328007 6 85 5.5 5.5 5.5 0.9 96 chr2L 17327911 intergenic not near genes chr2L 17327959 intergenic not near genes chr2L 17328007 intergenic not near genes chr2L_6_17325001 chr2L_17325001 RAL-796 305 chr2L 17517862 17517876 chr2L 17517944 17517959 5 83 2.5 4.5 3.5 1.1 97 chr2L 17517862 intron Dhc36C + chr2L 17517910 intron Dhc36C + chr2L 17517959 intron Dhc36C + chr2L_5_17515001 chr2L_17515001 RAL-796 306 chr2L 17635250 17635273 chr2L 17635680 17635703 8 429 10.5 10.5 10.5 0.7 453 chr2L 17635250 intergenic not near genes chr2L 17635476 intergenic not near genes chr2L 17635703 intergenic not near genes chr2L_8_17635001 chr2L_17635001 RAL-796 307 chr2L 17859328 17859356 chr2L 17859724 17859752 5 396 6.0 5.5 5.8 0.7 424 chr2L 17859328 intron CadN2 - chr2L 17859540 intron CadN2 - chr2L 17859752 intron CadN2 - chr2L_5_17855001 chr2L_17855001 RAL-796 308 chr2L 17941851 17941867 chr2L 17941935 17941949 5 82 5.0 7.0 6.0 0.7 98 chr2L 17941851 intergenic not near genes chr2L 17941900 intergenic not near genes chr2L 17941949 intergenic not near genes chr2L_5_17940001 chr2L_17940001 RAL-796 309 chr2L 17944416 17944446 chr2L 17944579 17944609 9 163 5.0 5.5 5.2 1.5 193 chr2L 17944416 intergenic not near genes chr2L 17944512 intergenic not near genes chr2L 17944609 intergenic not near genes chr2L_9_17940001 chr2L_17940001 RAL-796 310 chr2L 17951951 17951974 chr2L 17953418 17953441 hobo 5 1465 3.0 2.0 2.5 1.4 1490 chr2L 17951951 intergenic CR44398 -,CR44397 - chr2L 17952696 intergenic not near genes chr2L 17953441 intergenic not near genes chr2L_5_17950001 chr2L_17950001 RAL-796 311 chr2L 18020741 18020770 chr2L 18020828 18020857 8 84 6.5 13.0 9.8 0.7 116 chr2L 18020741 intron rdo + chr2L 18020799 intron rdo + chr2L 18020857 intron rdo + chr2L_8_18020001 chr2L_18020001 RAL-796 312 chr2L 18051897 18051907 chr2L 18061024 18061054 roo 5 9143 1.0 2.5 1.8 1.8 9157 chr2L 18051897 intron rdo + chr2L 18056476 intron rdo + chr2L 18061054 intron rdo + chr2L_5_18055001 chr2L_18055001 RAL-796 313 chr2L 18111244 18111263 chr2L 18111334 18111354 8 89 7.5 4.0 5.8 1.2 110 chr2L 18111244 intergenic not near genes chr2L 18111299 intergenic not near genes chr2L 18111354 intergenic not near genes chr2L_8_18110001 chr2L_18110001 RAL-796 314 chr2L 18291528 18291558 chr2L 18291626 18291653 4 97 3.5 3.0 3.2 1.0 125 chr2L 18291528 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291590 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291653 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_4_18290001 chr2L_18290001 RAL-796 315 chr2L 18326918 18326947 chr2L 18327028 18327057 7 110 5.5 9.0 7.2 0.9 139 chr2L 18326918 intron Fas3 + chr2L 18326988 intron Fas3 + chr2L 18327057 intron Fas3 + chr2L_7_18325001 chr2L_18325001 RAL-796 316 chr2L 18344618 18344647 chr2L 18344706 18344730 10 87 6.0 8.5 7.2 1.2 112 chr2L 18344618 intron Fas3 + chr2L 18344674 intron Fas3 + chr2L 18344730 intron Fas3 + chr2L_10_18340001 chr2L_18340001 RAL-796 317 chr2L 18408022 18408052 chr2L 18412805 18412836 Doc 7 4784 4.0 0.0 2.0 2.3 4814 chr2L 18408022 intergenic not near genes chr2L 18410429 intergenic not near genes chr2L 18412836 intergenic not near genes chr2L_7_18410001 chr2L_18410001 RAL-796 318 chr2L 18546235 18546256 chr2L 18546321 18546342 6 85 18.0 17.5 17.8 0.3 107 chr2L 18546235 intron Pde11 - chr2L 18546288 intron Pde11 - chr2L 18546342 intron Pde11 - chr2L_6_18545001 chr2L_18545001 RAL-796 319 chr2L 18670539 18670550 chr2L 18670839 18670849 5 300 12.5 7.0 9.8 0.5 310 chr2L 18670539 intron CG43338 - chr2L 18670694 intron CG43338 - chr2L 18670849 intron CG43338 - chr2L_5_18670001 chr2L_18670001 RAL-796 320 chr2L 18790283 18790321 chr2L 18791103 18791141 8 820 19.0 19.5 19.2 0.4 858 chr2L 18790283 intron ham - chr2L 18790712 intron ham - chr2L 18791141 intron ham - chr2L_8_18790001 chr2L_18790001 RAL-796 321 chr2L 18812558 18812589 chr2L 18812821 18812852 7 262 2.0 6.0 4.0 1.4 294 chr2L 18812558 intergenic CG17325 +,CG42305 + chr2L 18812705 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812852 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_7_18810001 chr2L_18810001 RAL-796 322 chr2L 18876867 18876883 chr2L 18876945 18876961 4 78 3.5 8.0 5.8 0.6 94 chr2L 18876867 intron tup - chr2L 18876914 intron tup - chr2L 18876961 intron tup - chr2L_4_18875001 chr2L_18875001 RAL-796 323 chr2L 18883856 18883885 chr2L 18883933 18883966 9 81 3.0 6.0 4.5 1.6 110 chr2L 18883856 intergenic not near genes chr2L 18883911 intergenic not near genes chr2L 18883966 intergenic not near genes chr2L_9_18880001 chr2L_18880001 RAL-796 324 chr2L 18886902 18886915 chr2L 18886993 18887196 5 243 1.0 2.0 1.5 2.0 294 chr2L 18886902 intergenic not near genes chr2L 18887049 intergenic not near genes chr2L 18887196 intergenic not near genes chr2L_5_18885001 chr2L_18885001 RAL-796 325 chr2L 19024096 19024097 chr2L 21768291 21768291 4 2744194 8.0 14.5 11.2 0.3 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_4_20395001 chr2L_20395001 RAL-796 326 chr2L 19121047 19121071 chr2L 19121122 19121149 7 77 6.5 4.0 5.2 1.1 102 chr2L 19121047 intergenic l(2)37Cc - chr2L 19121098 intergenic l(2)37Cc - chr2L 19121149 intergenic l(2)37Cc - chr2L_7_19120001 chr2L_19120001 RAL-796 327 chr2L 19147271 19147287 chr2L 19147385 19147402 4 115 10.5 2.5 6.5 0.5 131 chr2L 19147271 intron brat + chr2L 19147336 intron brat + chr2L 19147402 intron brat + chr2L_4_19145001 chr2L_19145001 RAL-796 328 chr2L 19147376 19147403 chr2L 19154411 19154436 297 7 7035 0.5 3.5 2.0 2.3 7060 chr2L 19147376 intron brat + chr2L 19150906 intron brat + chr2L 19154436 intron brat + chr2L_7_19150001 chr2L_19150001 RAL-796 329 chr2L 19182975 19182999 chr2L 19183052 19183078 6 78 8.5 8.0 8.2 0.7 103 chr2L 19182975 intergenic CR17567 -,CG42688 - chr2L 19183026 intergenic CR17567 -,CG42688 - chr2L 19183078 3` UTR CR17567 - chr2L_6_19180001 chr2L_19180001 RAL-796 330 chr2L 19183341 19183370 chr2L 19183421 19183450 6 80 7.5 4.5 6.0 0.9 109 chr2L 19183341 intron CR17567 - chr2L 19183396 3` UTR CR17567 - chr2L 19183450 3` UTR CR17567 - chr2L_6_19180001 chr2L_19180001 RAL-796 331 chr2L 19345014 19345048 chr2L 19357223 19357257 blood 9 12208 3.0 6.5 4.8 1.6 12243 chr2L 19345014 intron dnt - chr2L 19351136 intron dnt - chr2L 19357257 intron dnt - chr2L_9_19350001 chr2L_19350001 RAL-796 332 chr2L 19357549 19357567 chr2L 19357638 19357656 11 90 5.5 5.0 5.2 1.8 107 chr2L 19357549 intron dnt - chr2L 19357602 intron dnt - chr2L 19357656 intron dnt - chr2L_11_19355001 chr2L_19355001 RAL-796 333 chr2L 19361888 19361901 chr2L 19361975 19361987 4 87 10.0 9.0 9.5 0.4 99 chr2L 19361888 intron dnt - chr2L 19361938 intron dnt - chr2L 19361987 intron dnt - chr2L_4_19360001 chr2L_19360001 RAL-796 334 chr2L 19374501 19374519 chr2L 19374610 19374628 4 109 3.0 4.5 3.8 0.8 127 chr2L 19374501 intergenic not near genes chr2L 19374564 intergenic not near genes chr2L 19374628 intergenic not near genes chr2L_4_19370001 chr2L_19370001 RAL-796 335 chr2L 19486886 19486913 chr2L 19486965 19486992 5 79 1.5 2.5 2.0 1.7 106 chr2L 19486886 intergenic CG13084 + chr2L 19486939 intergenic CG13084 + chr2L 19486992 intergenic CG13084 +,CG13083 + chr2L_5_19485001 chr2L_19485001 RAL-796 336 chr2L 19544598 19544624 chr2L 19544674 19544696 5 70 4.5 3.5 4.0 1.0 98 chr2L 19544598 exon ref(2)P + chr2L 19544647 exon ref(2)P + chr2L 19544696 exon ref(2)P + chr2L_5_19540001 chr2L_19540001 RAL-796 337 chr2L 19560004 19560036 chr2L 19560257 19560288 5 253 20.5 16.5 18.5 0.3 284 chr2L 19560004 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560288 intron Tep5 + chr2L_5_19560001 chr2L_19560001 RAL-796 338 chr2L 19620095 19620132 chr2L 19621083 19621121 jockey 8 989 5.5 4.5 5.0 1.3 1026 chr2L 19620095 intron Lar + chr2L 19620608 intron Lar + chr2L 19621121 intron Lar + chr2L_8_19620001 chr2L_19620001 RAL-796 339 chr2L 19630998 19631010 chr2L 19631569 19631574 5 569 9.5 5.0 7.2 0.6 576 chr2L 19630998 intron Lar + chr2L 19631286 intron Lar + chr2L 19631574 intron Lar + chr2L_5_19630001 chr2L_19630001 RAL-796 340 chr2L 19652570 19652598 chr2L 19674004 19674031 opus 7 21434 5.0 2.5 3.8 1.5 21461 chr2L 19652570 intron Lar + chr2L 19663300 intron Lar + chr2L 19674031 intron Lar + chr2L_7_19660001 chr2L_19660001 RAL-796 341 chr2L 19690334 19690350 chr2L 19690411 19690425 5 74 2.5 6.0 4.2 1.0 91 chr2L 19690334 intron Lar + chr2L 19690380 intron Lar + chr2L 19690425 intron Lar + chr2L_5_19690001 chr2L_19690001 RAL-796 342 chr2L 19703535 19703570 chr2L 19712671 19712706 roo 18 9136 2.5 1.5 2.0 6.0 9171 chr2L 19703535 intron Lar + chr2L 19708120 intron Lar + chr2L 19712706 intron Lar + chr2L_18_19705001 chr2L_19705001 RAL-796 343 chr2L 19718416 19718440 chr2L 19718496 19718520 6 80 2.5 2.0 2.2 1.9 104 chr2L 19718416 intron Lar + chr2L 19718468 intron Lar + chr2L 19718520 intron Lar + chr2L_6_19715001 chr2L_19715001 RAL-796 344 chr2L 19762810 19762837 chr2L 19763052 19763079 pogo 4 242 3.0 3.0 3.0 1.0 269 chr2L 19762810 5` UTR fbp - chr2L 19762944 intron fbp - chr2L 19763079 intron fbp - chr2L_4_19760001 chr2L_19760001 RAL-796 345 chr2L 19791157 19791173 chr2L 19791239 19791261 5 87 5.5 7.0 6.2 0.7 104 chr2L 19791157 intron CdGAPr - chr2L 19791209 intron CdGAPr - chr2L 19791261 intron CdGAPr - chr2L_5_19790001 chr2L_19790001 RAL-796 346 chr2L 19794013 19794046 chr2L 19794097 19794130 9 84 3.5 7.0 5.2 1.5 117 chr2L 19794013 intron fs(2)ltoPP43 - chr2L 19794072 intron fs(2)ltoPP43 - chr2L 19794130 intron fs(2)ltoPP43 - chr2L_9_19790001 chr2L_19790001 RAL-796 347 chr2L 19821799 19821808 chr2L 19821876 19821885 4 77 2.5 2.5 2.5 1.1 86 chr2L 19821799 intron sick + chr2L 19821842 intron sick + chr2L 19821885 intron sick + chr2L_4_19820001 chr2L_19820001 RAL-796 348 chr2L 19821809 19821816 chr2L 19821873 19821893 6 75 2.0 2.0 2.0 2.0 84 chr2L 19821809 intron sick + chr2L 19821851 intron sick + chr2L 19821893 intron sick + chr2L_6_19820001 chr2L_19820001 RAL-796 349 chr2L 19856392 19856422 chr2L 19856637 19856667 8 243 9.0 7.0 8.0 0.9 275 chr2L 19856392 intron sick + chr2L 19856530 intron sick + chr2L 19856667 intron sick + chr2L_8_19855001 chr2L_19855001 RAL-796 350 chr2L 19871550 19871573 chr2L 19871637 19871660 8 87 6.0 8.0 7.0 1.0 110 chr2L 19871550 intron sick + chr2L 19871605 intron sick + chr2L 19871660 intron sick + chr2L_8_19870001 chr2L_19870001 RAL-796 351 chr2L 19898961 19898992 chr2L 19899101 19899124 6 138 5.0 6.5 5.8 0.9 163 chr2L 19898961 intron sick + chr2L 19899042 intron sick + chr2L 19899124 intron sick + chr2L_6_19895001 chr2L_19895001 RAL-796 352 chr2L 19972940 19972959 chr2L 19973028 19973044 4 86 9.5 10.0 9.8 0.4 104 chr2L 19972940 intron CG43861 - chr2L 19972992 intron CG43861 - chr2L 19973044 intron CG43861 - chr2L_4_19970001 chr2L_19970001 RAL-796 353 chr2L 20005875 20005901 chr2L 20010951 20010977 flea 8 5076 1.5 3.0 2.2 2.5 5102 chr2L 20005875 intron CG43861 - chr2L 20008426 intron CG43861 - chr2L 20010977 intron CG43861 - chr2L_8_20005001 chr2L_20005001 RAL-796 354 chr2L 20041438 20041461 chr2L 20041523 20041524 7 81 8.0 9.5 8.8 0.7 86 chr2L 20041438 intron sNPF + chr2L 20041481 intron sNPF + chr2L 20041524 intron sNPF + chr2L_7_20040001 chr2L_20040001 RAL-796 355 chr2L 20046572 20046576 chr2L 20046657 20046658 4 86 8.0 9.0 8.5 0.4 86 chr2L 20046572 intron sNPF + chr2L 20046615 intron sNPF + chr2L 20046658 intron sNPF + chr2L_4_20045001 chr2L_20045001 RAL-796 356 chr2L 20079517 20079545 chr2L 20079638 20079659 6 119 0.5 0.5 0.5 4.0 142 chr2L 20079517 intron,intron neb +,fok - chr2L 20079588 intron,intron neb +,fok - chr2L 20079659 intron,intron neb +,fok - chr2L_6_20075001 chr2L_20075001 RAL-796 357 chr2L 20085465 20085499 chr2L 20085557 20085586 9 91 2.0 4.5 3.2 2.1 121 chr2L 20085465 intron neb + chr2L 20085526 intron neb + chr2L 20085586 intron neb + chr2L_9_20085001 chr2L_20085001 RAL-796 358 chr2L 20127482 20127518 chr2L 20127709 20127745 7 227 6.0 9.0 7.5 0.8 263 chr2L 20127482 intergenic not near genes chr2L 20127614 intergenic not near genes chr2L 20127745 intergenic not near genes chr2L_7_20125001 chr2L_20125001 RAL-796 359 chr2L 20272121 20272144 chr2L 20282832 20282855 copia 7 10711 6.5 0.5 3.5 1.6 10734 chr2L 20272121 intergenic not near genes chr2L 20277488 intergenic not near genes chr2L 20282855 intergenic not near genes chr2L_7_20275001 chr2L_20275001 RAL-796 360 chr2L 20303161 20303189 chr2L 20310629 20310657 blood 5 7468 1.5 3.5 2.5 1.4 7496 chr2L 20303161 intergenic not near genes chr2L 20306909 intergenic not near genes chr2L 20310657 intergenic not near genes chr2L_5_20305001 chr2L_20305001 RAL-796 361 chr2L 20310882 20310921 chr2L 20310961 20311000 8 76 1.0 3.0 2.0 2.7 118 chr2L 20310882 intergenic spir + chr2L 20310941 intergenic spir + chr2L 20311000 intergenic spir + chr2L_8_20310001 chr2L_20310001 RAL-796 362 chr2L 20372218 20372239 chr2L 20372468 20372479 pogo 6 244 4.0 3.5 3.8 1.2 261 chr2L 20372218 intergenic Ugt37a1 - chr2L 20372348 intergenic Ugt37a1 - chr2L 20372479 exon Ugt37a1 - chr2L_6_20370001 chr2L_20370001 RAL-796 363 chr2L 20376075 20376098 chr2L 20376194 20376217 8 119 5.0 6.0 5.5 1.2 142 chr2L 20376075 intergenic not near genes chr2L 20376146 intergenic not near genes chr2L 20376217 intergenic not near genes chr2L_8_20375001 chr2L_20375001 RAL-796 364 chr2L 20549132 20549150 chr2L 20549214 20549230 4 82 13.5 7.5 10.5 0.3 98 chr2L 20549132 intergenic not near genes chr2L 20549181 intergenic not near genes chr2L 20549230 intergenic not near genes chr2L_4_20545001 chr2L_20545001 RAL-796 365 chr2L 20552806 20552821 chr2L 20553041 20553055 5 237 3.5 5.0 4.2 1.0 249 chr2L 20552806 intergenic not near genes chr2L 20552930 intergenic not near genes chr2L 20553055 intergenic not near genes chr2L_5_20550001 chr2L_20550001 RAL-796 366 chr2L 20568668 20568687 chr2L 20569058 20569077 X-element 8 390 3.0 3.0 3.0 2.0 409 chr2L 20568668 intron CR45347 + chr2L 20568872 intron CR45347 + chr2L 20569077 intron CR45347 + chr2L_8_20565001 chr2L_20565001 RAL-796 367 chr2L 20576223 20576246 chr2L 20583691 20583714 blood 7 7468 7.5 3.5 5.5 1.1 7491 chr2L 20576223 intergenic not near genes chr2L 20579968 intergenic not near genes chr2L 20583714 3` UTR CR44909 - chr2L_7_20575001 chr2L_20575001 RAL-796 368 chr2L 20597111 20597120 chr2L 20597168 20597197 4 72 2.0 6.0 4.0 0.8 86 chr2L 20597111 intron CR44909 - chr2L 20597154 intron CR44909 - chr2L 20597197 intron CR44909 - chr2L_4_20595001 chr2L_20595001 RAL-796 369 chr2L 20623828 20623861 chr2L 20623907 20623940 10 74 4.0 7.5 5.8 1.5 112 chr2L 20623828 intron CR44909 - chr2L 20623884 intron CR44909 - chr2L 20623940 intron CR44909 - chr2L_10_20620001 chr2L_20620001 RAL-796 370 chr2L 20668687 20668723 chr2L 20668763 20668799 8 76 2.0 4.0 3.0 2.0 112 chr2L 20668687 intron CG31678 - chr2L 20668743 intron CG31678 - chr2L 20668799 intron CG31678 - chr2L_8_20665001 chr2L_20665001 RAL-796 371 chr2L 20715151 20715173 chr2L 20715388 20715410 4 237 7.0 12.0 9.5 0.4 259 chr2L 20715151 intergenic not near genes chr2L 20715280 intergenic not near genes chr2L 20715410 intergenic not near genes chr2L_4_20715001 chr2L_20715001 RAL-796 372 chr2L 20724211 20724228 chr2L 20724299 20724316 5 88 11.5 12.5 12.0 0.4 105 chr2L 20724211 3` UTR CG9316 - chr2L 20724264 3` UTR CG9316 - chr2L 20724316 3` UTR CG9316 - chr2L_5_20720001 chr2L_20720001 RAL-796 373 chr2L 20814830 20814858 chr2L 20817527 20817557 6 2697 22.5 11.0 16.8 0.3 2727 chr2L 20814830 exon CG33322 - chr2L 20816194 5` UTR CG33322 - chr2L 20817557 intergenic CheB38a -,CheB38b - chr2L_6_20815001 chr2L_20815001 RAL-796 374 chr2L 20835813 20835837 chr2L 20836529 20836553 Quasimodo 4 716 1.0 3.0 2.0 1.3 740 chr2L 20835813 5` UTR Oseg5 - chr2L 20836183 intergenic Oseg5 -,Spn38F - chr2L 20836553 intergenic Spn38F - chr2L_4_20835001 chr2L_20835001 RAL-796 375 chr2L 20840034 20840049 chr2L 20840243 20840261 4 211 11.5 4.0 7.8 0.5 227 chr2L 20840034 intergenic not near genes chr2L 20840148 intergenic not near genes chr2L 20840261 intergenic CG31676 + chr2L_4_20840001 chr2L_20840001 RAL-796 376 chr2L 20968310 20968342 chr2L 20968472 20968504 5 162 7.5 5.5 6.5 0.7 194 chr2L 20968310 intron CG42238 - chr2L 20968407 intron CG42238 - chr2L 20968504 intron CG42238 - chr2L_5_20965001 chr2L_20965001 RAL-796 377 chr2L 20976642 20976678 chr2L 20981457 20981493 X-element 5 4815 2.5 3.5 3.0 1.2 4851 chr2L 20976642 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981493 intron CG42238 - chr2L_5_20975001 chr2L_20975001 RAL-796 378 chr2L 21020271 21020309 chr2L 21023948 21023986 NOF 7 3677 1.5 2.0 1.8 2.5 3715 chr2L 21020271 intron CG42238 - chr2L 21022128 intron CG42238 - chr2L 21023986 intron CG42238 - chr2L_7_21020001 chr2L_21020001 RAL-796 379 chr2L 21041145 21041164 chr2L 21049397 21049417 Tirant 7 8257 2.5 2.0 2.2 2.2 8272 chr2L 21041145 intron CG42238 - chr2L 21045281 intron CG42238 - chr2L 21049417 intron CG42238 - chr2L_7_21045001 chr2L_21045001 RAL-796 380 chr2L 21074917 21074933 chr2L 21075008 21075024 4 91 2.0 2.5 2.2 1.2 107 chr2L 21074917 intergenic tadr + chr2L 21074970 intergenic tadr + chr2L 21075024 intergenic tadr + chr2L_4_21070001 chr2L_21070001 RAL-796 381 chr2L 21755494 21755522 chr2L 21755618 21755645 7 124 8.0 7.0 7.5 0.8 151 chr2L 21755494 intron step - chr2L 21755570 intron step - chr2L 21755645 intron step - chr2L_7_21755001 chr2L_21755001 RAL-796 382 chr2L 21757581 21757593 chr2L 21757662 21757674 4 81 5.0 5.0 5.0 0.7 93 chr2L 21757581 intergenic step -,CG1416 + chr2L 21757628 intergenic step -,CG1416 + chr2L 21757674 intergenic step -,CG1416 + chr2L_4_21755001 chr2L_21755001 RAL-796 383 chr2L 21806226 21806261 chr2L 21806329 21806364 8 103 1.5 2.0 1.8 2.9 138 chr2L 21806226 intergenic not near genes chr2L 21806295 intergenic not near genes chr2L 21806364 intergenic not near genes chr2L_8_21805001 chr2L_21805001 RAL-796 384 chr2L 21809011 21809046 chr2L 21809217 21809249 13 205 1.5 3.5 2.5 3.7 238 chr2L 21809011 intergenic not near genes chr2L 21809130 intergenic not near genes chr2L 21809249 intergenic not near genes chr2L_13_21805001 chr2L_21805001 RAL-796 385 chr2L 21981682 21981715 chr2L 21990847 21990879 roo 13 9165 1.5 4.5 3.0 3.2 9197 chr2L 21981682 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990879 exon CG2528 - chr2L_13_21985001 chr2L_21985001 RAL-796 386 chr2L 22179542 22179568 chr2L 22179619 22179645 5 77 9.5 7.0 8.2 0.5 103 chr2L 22179542 intron CG3635 + chr2L 22179594 intron CG3635 + chr2L 22179645 intron CG3635 + chr2L_5_22175001 chr2L_22175001 RAL-796 387 chr2L 22256842 22256870 chr2L 22256931 22256959 6 89 8.5 9.0 8.8 0.6 117 chr2L 22256842 intron Tif-IA + chr2L 22256900 intron Tif-IA + chr2L 22256959 intron Tif-IA + chr2L_6_22255001 chr2L_22255001 RAL-796 388 chr2L 22548921 22548942 chr2L 22550146 22550167 1360 5 1224 5.0 8.5 6.8 0.6 1246 chr2L 22548921 intergenic CG17490 + chr2L 22549544 intergenic not near genes chr2L 22550167 intergenic CG17493 + chr2L_5_22545001 chr2L_22545001 RAL-796 389 chr2L 22776421 22776452 chr2L 22778210 22778241 S-element 4 1789 0.5 0.5 0.5 2.7 1820 chr2L 22776421 intergenic not near genes chr2L 22777331 intergenic not near genes chr2L 22778241 intergenic not near genes chr2L_4_22775001 chr2L_22775001 RAL-796 390 chr2L 23181419 23181426 chr2L 23181509 23181535 4 104 5.0 4.5 4.8 0.7 116 chr2L 23181419 intergenic not near genes chr2L 23181477 intergenic not near genes chr2L 23181535 intergenic not near genes chr2L_4_23180001 chr2L_23180001 RAL-796 391 chr2R 529328 529357 chr2R 537951 537982 Max-element 6 8623 2.0 2.0 2.0 2.0 8654 chr2R 529328 intron CG40378 + chr2R 533655 intron CG40378 + chr2R 537982 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-796 392 chr2R 1082369 1082385 chr2R 1087129 1087147 Doc 6 4763 4.0 3.5 3.8 1.2 4778 chr2R 1082369 intron rl + chr2R 1084758 intron rl + chr2R 1087147 intron rl + chr2R_6_1080001 chr2R_1080001 RAL-796 393 chr2R 2498982 2499018 chr2R 2508129 2508165 roo 7 9147 3.5 1.0 2.2 2.2 9183 chr2R 2498982 intron MFS17 - chr2R 2503574 intron MFS17 - chr2R 2508165 intron MFS17 - chr2R_7_2500001 chr2R_2500001 RAL-796 394 chr2R 3144099 3144110 chr2R 3393377 3393388 Doc 5 249278 12.0 12.5 12.2 0.4 249289 chr2R 3144099 intron CG42596 + chr2R 3268744 intergenic not near genes chr2R 3393388 intergenic not near genes chr2R_5_3265001 chr2R_3265001 RAL-796 395 chr2R 3172841 3172852 chr2R 5255565 5255578 1360 4 2082732 6.0 4.0 5.0 0.7 2082737 chr2R 3172841 intron CG42596 + chr2R 4214210 intergenic not near genes chr2R 5255578 intergenic CR41443 + chr2R_4_4210001 chr2R_4210001 RAL-796 396 chr2R 3293757 3293771 chr2R 3293835 3293848 4 78 3.0 2.0 2.5 1.1 91 chr2R 3293757 intergenic not near genes chr2R 3293802 intergenic not near genes chr2R 3293848 intergenic not near genes chr2R_4_3290001 chr2R_3290001 RAL-796 397 chr2R 4312953 4312987 chr2R 4313037 4313071 12 82 3.0 3.5 3.2 2.9 118 chr2R 4312953 intergenic not near genes chr2R 4313012 intergenic not near genes chr2R 4313071 intergenic not near genes chr2R_12_4310001 chr2R_4310001 RAL-796 398 chr2R 4603343 4603371 chr2R 4603426 4603449 5 80 3.5 6.0 4.8 0.9 106 chr2R 4603343 intron p120ctn + chr2R 4603396 intron p120ctn + chr2R 4603449 intron p120ctn + chr2R_5_4600001 chr2R_4600001 RAL-796 399 chr2R 4621317 4621345 chr2R 4621857 4621885 8 539 2.5 3.0 2.8 2.1 568 chr2R 4621317 3` UTR CR44101 - chr2R 4621601 3` UTR CR44101 - chr2R 4621885 3` UTR CR44101 - chr2R_8_4620001 chr2R_4620001 RAL-796 400 chr2R 4622950 4622988 chr2R 4624109 4624115 1360 16 1155 2.0 3.5 2.8 4.2 1165 chr2R 4622950 intergenic CR44101 - chr2R 4623532 intergenic not near genes chr2R 4624115 intergenic not near genes chr2R_16_4620001 chr2R_4620001 RAL-796 401 chr2R 4624651 4624669 chr2R 4626556 4626574 Bica 9 1905 7.5 8.0 7.8 1.0 1923 chr2R 4624651 intergenic not near genes chr2R 4625612 intergenic not near genes chr2R 4626574 intergenic not near genes chr2R_9_4625001 chr2R_4625001 RAL-796 402 chr2R 4781718 4781745 chr2R 4781833 4781860 8 115 10.0 6.5 8.2 0.9 142 chr2R 4781718 intergenic not near genes chr2R 4781789 intergenic not near genes chr2R 4781860 intergenic not near genes chr2R_8_4780001 chr2R_4780001 RAL-796 403 chr2R 4783418 4783446 chr2R 4783495 4783506 6 74 4.5 7.0 5.8 0.9 88 chr2R 4783418 intergenic not near genes chr2R 4783462 intergenic not near genes chr2R 4783506 intergenic not near genes chr2R_6_4780001 chr2R_4780001 RAL-796 404 chr2R 4838874 4838887 chr2R 4840397 4840410 transib2 5 1523 9.5 11.0 10.2 0.4 1536 chr2R 4838874 intergenic not near genes chr2R 4839642 intergenic not near genes chr2R 4840410 intergenic not near genes chr2R_5_4835001 chr2R_4835001 RAL-796 405 chr2R 4908909 4908945 chr2R 4908997 4909033 8 88 11.0 12.5 11.8 0.6 124 chr2R 4908909 intergenic not near genes chr2R 4908971 intergenic not near genes chr2R 4909033 intergenic not near genes chr2R_8_4905001 chr2R_4905001 RAL-796 406 chr2R 4955036 4955046 chr2R 4955388 4955398 6 352 4.5 6.5 5.5 0.9 362 chr2R 4955036 intron Ir41a + chr2R 4955217 intron Ir41a + chr2R 4955398 intron Ir41a + chr2R_6_4955001 chr2R_4955001 RAL-796 407 chr2R 4957023 4957046 chr2R 4957126 4957149 9 103 2.0 3.0 2.5 2.6 126 chr2R 4957023 intron Ir41a + chr2R 4957086 intron Ir41a + chr2R 4957149 intron Ir41a + chr2R_9_4955001 chr2R_4955001 RAL-796 408 chr2R 5103046 5103071 chr2R 5103127 5103153 8 80 4.0 2.0 3.0 2.0 107 chr2R 5103046 intergenic not near genes chr2R 5103100 intergenic not near genes chr2R 5103153 intergenic not near genes chr2R_8_5100001 chr2R_5100001 RAL-796 409 chr2R 5237355 5237370 chr2R 5237437 5237452 5 82 2.0 0.0 1.0 2.5 97 chr2R 5237355 intron Nipped-A - chr2R 5237404 intron Nipped-A - chr2R 5237452 intron Nipped-A - chr2R_5_5235001 chr2R_5235001 RAL-796 410 chr2R 5303488 5303520 chr2R 5303576 5303608 11 88 1.5 0.5 1.0 5.5 120 chr2R 5303488 intergenic not near genes chr2R 5303548 intergenic not near genes chr2R 5303608 intergenic not near genes chr2R_11_5300001 chr2R_5300001 RAL-796 411 chr2R 5396256 5396289 chr2R 5396494 5396527 5 237 13.0 16.5 14.8 0.3 271 chr2R 5396256 intergenic not near genes chr2R 5396392 intergenic not near genes chr2R 5396527 intergenic not near genes chr2R_5_5395001 chr2R_5395001 RAL-796 412 chr2R 5417992 5418021 chr2R 5420624 5420653 Burdock 7 2632 1.0 1.0 1.0 3.5 2661 chr2R 5417992 intron laccase2 + chr2R 5419322 intron laccase2 + chr2R 5420653 intron laccase2 + chr2R_7_5415001 chr2R_5415001 RAL-796 413 chr2R 5472366 5472392 chr2R 5472460 5472486 13 94 7.0 3.5 5.2 2.1 120 chr2R 5472366 intron CG30440 - chr2R 5472426 intron CG30440 - chr2R 5472486 intron CG30440 - chr2R_13_5470001 chr2R_5470001 RAL-796 414 chr2R 5473366 5473400 chr2R 5473461 5473495 10 95 7.0 6.5 6.8 1.3 129 chr2R 5473366 intron CG30440 - chr2R 5473430 intron CG30440 - chr2R 5473495 intron CG30440 - chr2R_10_5470001 chr2R_5470001 RAL-796 415 chr2R 5581403 5581422 chr2R 5627611 5627631 5 46209 2.0 16.0 9.0 0.5 46228 chr2R 5581403 intergenic not near genes chr2R 5604517 intron Fis1 - chr2R 5627631 intergenic not near genes chr2R_5_5600001 chr2R_5600001 RAL-796 416 chr2R 5772537 5772548 chr2R 5772625 5772630 4 89 5.0 3.0 4.0 0.8 93 chr2R 5772537 3` UTR Gp210 + chr2R 5772584 3` UTR Gp210 + chr2R 5772630 3` UTR Gp210 + chr2R_4_5770001 chr2R_5770001 RAL-796 417 chr2R 5772837 5772854 chr2R 5772919 5772936 5 82 3.0 3.0 3.0 1.2 99 chr2R 5772837 3` UTR Gp210 + chr2R 5772886 3` UTR Gp210 + chr2R 5772936 3` UTR Gp210 + chr2R_5_5770001 chr2R_5770001 RAL-796 418 chr2R 5782943 5782971 chr2R 5783023 5783055 5 83 5.5 7.5 6.5 0.7 112 chr2R 5782943 intergenic ZnT41F - chr2R 5782999 intergenic ZnT41F - chr2R 5783055 intergenic ZnT41F - chr2R_5_5780001 chr2R_5780001 RAL-796 419 chr2R 5794229 5794255 chr2R 5794357 5794383 7 126 16.0 13.0 14.5 0.5 154 chr2R 5794229 intergenic not near genes chr2R 5794306 intergenic not near genes chr2R 5794383 intergenic not near genes chr2R_7_5790001 chr2R_5790001 RAL-796 420 chr2R 5869277 5869308 chr2R 5874350 5874384 flea 10 5075 2.5 2.0 2.2 3.1 5107 chr2R 5869277 intergenic not near genes chr2R 5871830 intergenic not near genes chr2R 5874384 intergenic not near genes chr2R_10_5870001 chr2R_5870001 RAL-796 421 chr2R 5878926 5878959 chr2R 5879006 5879039 14 80 0.0 0.5 0.2 11.7 113 chr2R 5878926 intergenic CG44438 - chr2R 5878982 intergenic CG44438 - chr2R 5879039 intergenic CG44438 - chr2R_14_5875001 chr2R_5875001 RAL-796 422 chr2R 6016788 6016818 chr2R 6016872 6016902 7 84 1.0 1.0 1.0 3.5 114 chr2R 6016788 intergenic not near genes chr2R 6016845 intergenic not near genes chr2R 6016902 intergenic not near genes chr2R_7_6015001 chr2R_6015001 RAL-796 423 chr2R 6096721 6096750 chr2R 6101908 6101929 BS 4 5184 5.0 2.5 3.8 0.8 5208 chr2R 6096721 intron EcR - chr2R 6099325 intron EcR - chr2R 6101929 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-796 424 chr2R 6129325 6129357 chr2R 6129403 6129435 9 78 1.5 4.0 2.8 2.4 110 chr2R 6129325 intron EcR - chr2R 6129380 intron EcR - chr2R 6129435 intron EcR - chr2R_9_6125001 chr2R_6125001 RAL-796 425 chr2R 6144409 6144440 chr2R 6144493 6144524 14 84 2.0 1.0 1.5 5.6 115 chr2R 6144409 intron EcR - chr2R 6144466 intron EcR - chr2R 6144524 intron EcR - chr2R_14_6140001 chr2R_6140001 RAL-796 426 chr2R 6552002 6552024 chr2R 6552104 6552127 4 102 8.5 8.0 8.2 0.4 125 chr2R 6552002 intron jing + chr2R 6552064 intron jing + chr2R 6552127 intron jing + chr2R_4_6550001 chr2R_6550001 RAL-796 427 chr2R 6685873 6685894 chr2R 6685955 6685976 4 82 10.0 8.0 9.0 0.4 103 chr2R 6685873 intron,intron CG9422 +,Tdc2 - chr2R 6685924 intron,intron CG9422 +,Tdc2 - chr2R 6685976 intron,intron CG9422 +,Tdc2 - chr2R_4_6685001 chr2R_6685001 RAL-796 428 chr2R 6712585 6712598 chr2R 6712682 6712694 4 96 10.5 5.0 7.8 0.5 109 chr2R 6712585 intron,intron CG3409 -,CG45092 - chr2R 6712640 intron,intron CG3409 -,CG45092 - chr2R 6712694 intron,intron CG3409 -,CG45092 - chr2R_4_6710001 chr2R_6710001 RAL-796 429 chr2R 6797087 6797112 chr2R 6797180 6797204 7 91 4.5 3.0 3.8 1.5 117 chr2R 6797087 5` UTR Epac - chr2R 6797146 5` UTR Epac - chr2R 6797204 5` UTR Epac - chr2R_7_6795001 chr2R_6795001 RAL-796 430 chr2R 6825437 6825465 chr2R 6825530 6825557 5 93 6.0 4.0 5.0 0.8 120 chr2R 6825437 intergenic not near genes chr2R 6825497 intergenic not near genes chr2R 6825557 intergenic not near genes chr2R_5_6825001 chr2R_6825001 RAL-796 431 chr2R 6861579 6861603 chr2R 6861656 6861681 8 77 6.5 6.0 6.2 1.1 102 chr2R 6861579 intergenic coro - chr2R 6861630 intergenic coro - chr2R 6861681 intergenic coro - chr2R_8_6860001 chr2R_6860001 RAL-796 432 chr2R 6870596 6870624 chr2R 6870699 6870727 5 103 3.5 5.0 4.2 1.0 131 chr2R 6870596 intron coro - chr2R 6870662 intron coro - chr2R 6870727 intron coro - chr2R_5_6870001 chr2R_6870001 RAL-796 433 chr2R 6876222 6876247 chr2R 6876304 6876313 12 81 8.5 9.0 8.8 1.2 91 chr2R 6876222 intron,intron CR44169 +,Spn42Da - chr2R 6876268 intron,intron CR44169 +,Spn42Da - chr2R 6876313 5` UTR,intron CR44169 +,Spn42Da - chr2R_12_6875001 chr2R_6875001 RAL-796 434 chr2R 6962449 6962475 chr2R 6962806 6962832 6 357 9.5 13.0 11.2 0.5 383 chr2R 6962449 intron,intron mim -,CheB42c - chr2R 6962640 intron,intron mim -,CheB42c - chr2R 6962832 intron,intron mim -,CheB42c - chr2R_6_6960001 chr2R_6960001 RAL-796 435 chr2R 6978807 6978834 chr2R 6978949 6978976 5 142 4.0 6.0 5.0 0.8 169 chr2R 6978807 intron vimar - chr2R 6978892 intron vimar - chr2R 6978976 intron vimar - chr2R_5_6975001 chr2R_6975001 RAL-796 436 chr2R 7128603 7128623 chr2R 7129405 7129405 5 797 9.0 21.0 15.0 0.3 802 chr2R 7128603 exon Cyp9b1 - chr2R 7129004 exon Cyp9b1 - chr2R 7129405 exon Cyp9b1 - chr2R_5_7125001 chr2R_7125001 RAL-796 437 chr2R 7128658 7128684 chr2R 7129543 7129569 10 887 12.5 26.5 19.5 0.5 911 chr2R 7128658 exon Cyp9b1 - chr2R 7129114 exon Cyp9b1 - chr2R 7129569 intron Cyp9b1 - chr2R_10_7125001 chr2R_7125001 RAL-796 438 chr2R 7143629 7143660 chr2R 7143738 7143769 11 109 8.0 4.0 6.0 1.6 140 chr2R 7143629 intergenic not near genes chr2R 7143699 intergenic not near genes chr2R 7143769 intergenic not near genes chr2R_11_7140001 chr2R_7140001 RAL-796 439 chr2R 7160565 7160584 chr2R 7160643 7160662 9 78 4.5 5.0 4.8 1.6 97 chr2R 7160565 intron pk + chr2R 7160614 intron pk + chr2R 7160662 intron pk + chr2R_9_7160001 chr2R_7160001 RAL-796 440 chr2R 7164282 7164286 chr2R 7164462 7164477 5 187 2.0 10.0 6.0 0.7 195 chr2R 7164282 intron pk + chr2R 7164380 intron pk + chr2R 7164477 intron pk + chr2R_5_7160001 chr2R_7160001 RAL-796 441 chr2R 7171269 7171285 chr2R 7171355 7171371 4 85 6.5 6.0 6.2 0.6 102 chr2R 7171269 intron pk + chr2R 7171320 intron pk + chr2R 7171371 intron pk + chr2R_4_7170001 chr2R_7170001 RAL-796 442 chr2R 7235827 7235841 chr2R 7240908 7240933 jockey 4 5086 3.5 3.0 3.2 1.0 5106 chr2R 7235827 intergenic not near genes chr2R 7238380 intergenic not near genes chr2R 7240933 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-796 443 chr2R 7290190 7290210 chr2R 7290292 7290312 5 102 6.5 7.5 7.0 0.6 122 chr2R 7290190 intron pwn + chr2R 7290251 intron pwn + chr2R 7290312 intron pwn + chr2R_5_7290001 chr2R_7290001 RAL-796 444 chr2R 7434903 7434919 chr2R 7439203 7439220 Juan 4 4301 3.0 5.0 4.0 0.8 4317 chr2R 7434903 intergenic so + chr2R 7437062 intergenic not near genes chr2R 7439220 intergenic not near genes chr2R_4_7435001 chr2R_7435001 RAL-796 445 chr2R 7723963 7723977 chr2R 7724044 7724058 5 81 2.0 4.0 3.0 1.2 95 chr2R 7723963 intron CG18812 - chr2R 7724010 intron CG18812 - chr2R 7724058 intron CG18812 - chr2R_5_7720001 chr2R_7720001 RAL-796 446 chr2R 7743481 7743514 chr2R 7743562 7743595 15 81 3.0 3.5 3.2 3.6 114 chr2R 7743481 intron,intron CG30497 -,CG45093 - chr2R 7743538 intron,intron CG30497 -,CG45093 - chr2R 7743595 intron,intron CG30497 -,CG45093 - chr2R_15_7740001 chr2R_7740001 RAL-796 447 chr2R 7760284 7760306 chr2R 7760421 7760443 10 132 4.0 5.0 4.5 1.8 159 chr2R 7760284 intron,intron CG30497 -,CG45093 - chr2R 7760364 intron,intron CG30497 -,CG45093 - chr2R 7760443 intron,intron CG30497 -,CG45093 - chr2R_10_7760001 chr2R_7760001 RAL-796 448 chr2R 7869188 7869215 chr2R 7873974 7874001 Doc 9 4786 4.0 3.5 3.8 1.9 4813 chr2R 7869188 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7874001 intron Dgk - chr2R_9_7870001 chr2R_7870001 RAL-796 449 chr2R 7878649 7878678 chr2R 7878968 7878997 5 319 6.5 2.0 4.2 1.0 348 chr2R 7878649 intron Dgk - chr2R 7878823 intron Dgk - chr2R 7878997 intron Dgk - chr2R_5_7875001 chr2R_7875001 RAL-796 450 chr2R 7916426 7916457 chr2R 7916511 7916539 13 83 3.0 7.5 5.2 2.1 113 chr2R 7916426 5` UTR CG12159 - chr2R 7916482 intergenic CG12159 -,Cul1 + chr2R 7916539 intergenic CG12159 -,Cul1 + chr2R_13_7915001 chr2R_7915001 RAL-796 451 chr2R 8015653 8015684 chr2R 8017676 8017682 10 2020 1.5 2.5 2.0 3.3 2029 chr2R 8015653 intergenic mir-4981 + chr2R 8016668 intergenic not near genes chr2R 8017682 intergenic not near genes chr2R_10_8015001 chr2R_8015001 RAL-796 452 chr2R 8277636 8277660 chr2R 8277729 8277755 4 94 6.5 6.0 6.2 0.6 119 chr2R 8277636 5` UTR CR44280 + chr2R 8277696 5` UTR CR44280 + chr2R 8277755 5` UTR CR44280 + chr2R_4_8275001 chr2R_8275001 RAL-796 453 chr2R 8330862 8330888 chr2R 8331348 8331374 roo 6 486 4.5 2.5 3.5 1.3 512 chr2R 8330862 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331374 intron pdm3 + chr2R_6_8330001 chr2R_8330001 RAL-796 454 chr2R 8500891 8500901 chr2R 8501122 8501132 4 231 16.5 14.0 15.2 0.2 241 chr2R 8500891 intron mtt - chr2R 8501012 intron mtt - chr2R 8501132 intron mtt - chr2R_4_8500001 chr2R_8500001 RAL-796 455 chr2R 8508757 8508795 chr2R 8508840 8508855 7 79 1.0 1.5 1.2 3.2 98 chr2R 8508757 intron mtt - chr2R 8508806 intron mtt - chr2R 8508855 intron mtt - chr2R_7_8505001 chr2R_8505001 RAL-796 456 chr2R 8525090 8525105 chr2R 8525167 8525182 5 77 0.0 4.0 2.0 1.7 92 chr2R 8525090 intron mtt - chr2R 8525136 intron mtt - chr2R 8525182 intron mtt - chr2R_5_8525001 chr2R_8525001 RAL-796 457 chr2R 8530208 8530241 chr2R 8530323 8530356 5 115 6.5 8.0 7.2 0.6 148 chr2R 8530208 intron mtt - chr2R 8530282 intron mtt - chr2R 8530356 intron mtt - chr2R_5_8530001 chr2R_8530001 RAL-796 458 chr2R 8536198 8536227 chr2R 8536430 8536459 6 232 3.5 3.5 3.5 1.3 261 chr2R 8536198 intergenic not near genes chr2R 8536328 intergenic not near genes chr2R 8536459 intergenic not near genes chr2R_6_8535001 chr2R_8535001 RAL-796 459 chr2R 8537854 8537881 chr2R 8540403 8540430 6 2549 9.0 11.5 10.2 0.5 2576 chr2R 8537854 intergenic not near genes chr2R 8539142 intergenic not near genes chr2R 8540430 intergenic not near genes chr2R_6_8535001 chr2R_8535001 RAL-796 460 chr2R 8566035 8566061 chr2R 8566985 8567007 1360 10 951 2.0 3.0 2.5 2.9 972 chr2R 8566035 5` UTR Cyp6a14 - chr2R 8566521 5` UTR Cyp6a14 - chr2R 8567007 5` UTR Cyp6a14 - chr2R_10_8565001 chr2R_8565001 RAL-796 461 chr2R 8615774 8615807 chr2R 8615887 8615920 5 113 4.5 7.0 5.8 0.7 146 chr2R 8615774 intron Cirl + chr2R 8615847 intron Cirl + chr2R 8615920 5` UTR Cirl + chr2R_5_8615001 chr2R_8615001 RAL-796 462 chr2R 8637107 8637128 chr2R 8637190 8637211 4 83 10.5 14.0 12.2 0.3 104 chr2R 8637107 intergenic not near genes chr2R 8637159 intergenic not near genes chr2R 8637211 intergenic not near genes chr2R_4_8635001 chr2R_8635001 RAL-796 463 chr2R 8722770 8722793 chr2R 8723003 8723021 pogo 6 237 4.5 3.5 4.0 1.2 251 chr2R 8722770 intron CG14767 - chr2R 8722896 intron CG14767 - chr2R 8723021 intron CG14767 - chr2R_6_8720001 chr2R_8720001 RAL-796 464 chr2R 8759761 8759784 chr2R 8759840 8759863 4 79 4.0 2.5 3.2 1.0 102 chr2R 8759761 intergenic CG8740 + chr2R 8759812 intergenic CG8740 + chr2R 8759863 intergenic CG8740 + chr2R_4_8755001 chr2R_8755001 RAL-796 465 chr2R 8777931 8777940 chr2R 8784135 8784144 diver 4 6204 0.5 4.0 2.2 1.2 6213 chr2R 8777931 intergenic not near genes chr2R 8781038 intergenic not near genes chr2R 8784144 intergenic not near genes chr2R_4_8780001 chr2R_8780001 RAL-796 466 chr2R 9039009 9039040 chr2R 9039098 9039129 9 88 4.0 6.0 5.0 1.5 120 chr2R 9039009 intergenic not near genes chr2R 9039069 intergenic not near genes chr2R 9039129 intergenic not near genes chr2R_9_9035001 chr2R_9035001 RAL-796 467 chr2R 9052716 9052738 chr2R 9052797 9052819 4 81 5.5 8.0 6.8 0.5 103 chr2R 9052716 intron CG13743 - chr2R 9052768 intron CG13743 - chr2R 9052819 intron CG13743 - chr2R_4_9050001 chr2R_9050001 RAL-796 468 chr2R 9076137 9076157 chr2R 9076213 9076233 4 76 2.0 3.0 2.5 1.1 96 chr2R 9076137 intron ana + chr2R 9076185 intron ana + chr2R 9076233 intron ana + chr2R_4_9075001 chr2R_9075001 RAL-796 469 chr2R 9183135 9183151 chr2R 9183217 9183230 4 81 10.0 4.5 7.2 0.5 95 chr2R 9183135 intron ltd - chr2R 9183182 intron ltd - chr2R 9183230 intron ltd - chr2R_4_9180001 chr2R_9180001 RAL-796 470 chr2R 9212697 9212722 chr2R 9213183 9213207 roo 5 483 5.0 2.0 3.5 1.1 510 chr2R 9212697 intergenic CR45309 + chr2R 9212952 intergenic CR45309 + chr2R 9213207 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-796 471 chr2R 9236606 9236621 chr2R 9236693 9236708 4 86 6.0 4.0 5.0 0.7 102 chr2R 9236606 intron hig - chr2R 9236657 intron hig - chr2R 9236708 intron hig - chr2R_4_9235001 chr2R_9235001 RAL-796 472 chr2R 9267978 9268010 chr2R 9268064 9268096 6 86 1.5 1.5 1.5 2.4 118 chr2R 9267978 intron Pkn - chr2R 9268037 intron Pkn - chr2R 9268096 intron Pkn - chr2R_6_9265001 chr2R_9265001 RAL-796 473 chr2R 9331106 9331133 chr2R 9331186 9331214 7 82 2.0 5.0 3.5 1.6 108 chr2R 9331106 intron,intron CG13739 -,CG13954 - chr2R 9331160 intron,intron CG13739 -,CG13954 - chr2R 9331214 intron,intron CG13739 -,CG13954 - chr2R_7_9330001 chr2R_9330001 RAL-796 474 chr2R 9368137 9368152 chr2R 9368208 9368228 10 75 3.0 0.0 1.5 4.0 91 chr2R 9368137 intron CG13954 - chr2R 9368182 intron CG13954 - chr2R 9368228 intron CG13954 - chr2R_10_9365001 chr2R_9365001 RAL-796 475 chr2R 9408229 9408254 chr2R 9408312 9408337 6 83 5.5 4.5 5.0 1.0 108 chr2R 9408229 intron wun - chr2R 9408283 intron wun - chr2R 9408337 intron wun - chr2R_6_9405001 chr2R_9405001 RAL-796 476 chr2R 9510665 9510696 chr2R 9510780 9510811 8 116 0.0 0.5 0.2 6.7 146 chr2R 9510665 intron brp + chr2R 9510738 intron brp + chr2R 9510811 intron brp + chr2R_8_9510001 chr2R_9510001 RAL-796 477 chr2R 9561830 9561847 chr2R 9561918 9561935 6 88 0.0 1.5 0.8 3.3 105 chr2R 9561830 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561935 3` UTR,intron CR45281 -,CG1809 + chr2R_6_9560001 chr2R_9560001 RAL-796 478 chr2R 9807454 9807461 chr2R 9807598 9807605 5 144 0.0 7.0 3.5 1.1 151 chr2R 9807454 intergenic not near genes chr2R 9807530 intergenic not near genes chr2R 9807605 intergenic not near genes chr2R_5_9805001 chr2R_9805001 RAL-796 479 chr2R 9830284 9830298 chr2R 9830366 9830380 5 82 1.5 5.5 3.5 1.1 96 chr2R 9830284 intron hebe - chr2R 9830332 intron hebe - chr2R 9830380 intron hebe - chr2R_5_9830001 chr2R_9830001 RAL-796 480 chr2R 9871041 9871065 chr2R 9871527 9871550 roo 5 485 2.5 4.0 3.2 1.2 509 chr2R 9871041 intron cbx - chr2R 9871296 intron cbx - chr2R 9871550 intron,5` UTR cbx -,CG18446 + chr2R_5_9870001 chr2R_9870001 RAL-796 481 chr2R 9945436 9945466 chr2R 9945632 9945662 BS 9 196 4.5 4.0 4.2 1.7 226 chr2R 9945436 intron Mef2 - chr2R 9945549 intron Mef2 - chr2R 9945662 intron Mef2 - chr2R_9_9945001 chr2R_9945001 RAL-796 482 chr2R 10005558 10005584 chr2R 10005655 10005681 5 97 1.5 1.5 1.5 2.0 123 chr2R 10005558 intron Pka-R2 - chr2R 10005620 intron Pka-R2 - chr2R 10005681 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-796 483 chr2R 10005847 10005882 chr2R 10007012 10007045 1360 8 1163 3.0 1.5 2.2 2.5 1198 chr2R 10005847 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007045 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-796 484 chr2R 10010589 10010613 chr2R 10010711 10010735 10 122 3.0 1.0 2.0 3.3 146 chr2R 10010589 intron Pka-R2 - chr2R 10010662 intron Pka-R2 - chr2R 10010735 intron Pka-R2 - chr2R_10_10010001 chr2R_10010001 RAL-796 485 chr2R 10047812 10047844 chr2R 10047895 10047927 4 83 2.5 5.0 3.8 0.8 115 chr2R 10047812 intron oys - chr2R 10047870 intron oys - chr2R 10047927 intron oys - chr2R_4_10045001 chr2R_10045001 RAL-796 486 chr2R 10161296 10161324 chr2R 10161419 10161447 9 122 2.0 3.0 2.5 2.6 151 chr2R 10161296 intron KCNQ - chr2R 10161372 intron KCNQ - chr2R 10161447 intron KCNQ - chr2R_9_10160001 chr2R_10160001 RAL-796 487 chr2R 10176897 10176912 chr2R 10186064 10186079 roo 4 9167 1.0 0.5 0.8 2.2 9182 chr2R 10176897 intron KCNQ - chr2R 10181488 intron KCNQ - chr2R 10186079 intron KCNQ - chr2R_4_10180001 chr2R_10180001 RAL-796 488 chr2R 10189213 10189237 chr2R 10189291 10189309 4 76 1.0 0.5 0.8 2.2 96 chr2R 10189213 intron KCNQ - chr2R 10189261 intron KCNQ - chr2R 10189309 intron KCNQ - chr2R_4_10185001 chr2R_10185001 RAL-796 489 chr2R 10313320 10313353 chr2R 10313408 10313441 10 88 1.5 4.0 2.8 2.6 121 chr2R 10313320 intergenic not near genes chr2R 10313380 intergenic not near genes chr2R 10313441 intergenic Ndg + chr2R_10_10310001 chr2R_10310001 RAL-796 490 chr2R 10363869 10363895 chr2R 10363948 10363974 7 79 1.0 4.5 2.8 1.8 105 chr2R 10363869 intron CG42732 - chr2R 10363922 intron CG42732 - chr2R 10363974 intron CG42732 - chr2R_7_10360001 chr2R_10360001 RAL-796 491 chr2R 10385229 10385256 chr2R 10385339 10385366 8 109 1.0 1.0 1.0 4.0 137 chr2R 10385229 intron CG42732 - chr2R 10385298 intron CG42732 - chr2R 10385366 intron CG42732 - chr2R_8_10385001 chr2R_10385001 RAL-796 492 chr2R 10387978 10387998 chr2R 10388075 10388095 5 97 0.0 3.0 1.5 2.0 117 chr2R 10387978 intron CG42732 - chr2R 10388036 intron CG42732 - chr2R 10388095 intron CG42732 - chr2R_5_10385001 chr2R_10385001 RAL-796 493 chr2R 10415671 10415702 chr2R 10420667 10420698 10 4996 16.0 8.0 12.0 0.8 5027 chr2R 10415671 intron CG42732 - chr2R 10418184 intergenic not near genes chr2R 10420698 3` UTR CG11825 - chr2R_10_10415001 chr2R_10415001 RAL-796 494 chr2R 10457321 10457333 chr2R 10457406 10457418 4 84 2.5 4.0 3.2 1.0 97 chr2R 10457321 intron,intron Galphao +,Cyp49a1 - chr2R 10457370 intron,intron Galphao +,Cyp49a1 - chr2R 10457418 intron,intron Galphao +,Cyp49a1 - chr2R_4_10455001 chr2R_10455001 RAL-796 495 chr2R 10469029 10469056 chr2R 10469154 10469182 14 126 1.5 7.0 4.2 2.7 153 chr2R 10469029 intron CG11777 + chr2R 10469106 intron CG11777 + chr2R 10469182 intron CG11777 + chr2R_14_10465001 chr2R_10465001 RAL-796 496 chr2R 10562983 10563242 chr2R 10563061 10563340 8 80 0.0 0.0 0.0 8.0 357 chr2R 10562983 intron psq + chr2R 10563162 intron psq + chr2R 10563340 intron psq + chr2R_8_10560001 chr2R_10560001 RAL-796 497 chr2R 10563555 10563560 chr2R 10563634 10563640 4 80 11.0 6.0 8.5 0.4 85 chr2R 10563555 intron psq + chr2R 10563598 intron psq + chr2R 10563640 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-796 498 chr2R 10585578 10585586 chr2R 10594161 10594166 Tirant 5 8582 4.0 2.5 3.2 1.2 8588 chr2R 10585578 intron psq + chr2R 10589872 intron psq + chr2R 10594166 intron psq + chr2R_5_10585001 chr2R_10585001 RAL-796 499 chr2R 10678507 10678522 chr2R 10678591 10678619 7 95 1.5 3.0 2.2 2.2 112 chr2R 10678507 intron stan + chr2R 10678563 intron stan + chr2R 10678619 intron stan + chr2R_7_10675001 chr2R_10675001 RAL-796 500 chr2R 10758802 10758822 chr2R 10758897 10758921 10 98 4.0 3.5 3.8 2.1 119 chr2R 10758802 intron CG33144 - chr2R 10758862 intron CG33144 - chr2R 10758921 intron CG33144 - chr2R_10_10755001 chr2R_10755001 RAL-796 501 chr2R 10761556 10761589 chr2R 10761710 10761743 8 154 1.0 2.0 1.5 3.2 187 chr2R 10761556 intron,5` UTR CG33144 -,CR43605 + chr2R 10761650 intron,5` UTR CG33144 -,CR43605 + chr2R 10761743 intron CG33144 - chr2R_8_10760001 chr2R_10760001 RAL-796 502 chr2R 10796007 10796041 chr2R 10796089 10796123 13 82 2.5 3.5 3.0 3.2 116 chr2R 10796007 intron CG33144 - chr2R 10796065 intron CG33144 - chr2R 10796123 intron CG33144 - chr2R_13_10795001 chr2R_10795001 RAL-796 503 chr2R 10844585 10844615 chr2R 10844670 10844700 10 85 2.0 4.0 3.0 2.5 115 chr2R 10844585 intron CG30015 - chr2R 10844642 intron CG30015 - chr2R 10844700 intron CG30015 - chr2R_10_10840001 chr2R_10840001 RAL-796 504 chr2R 10860485 10860512 chr2R 10860567 10860593 8 82 4.5 2.0 3.2 1.9 108 chr2R 10860485 intron CG30015 - chr2R 10860539 intron CG30015 - chr2R 10860593 intron CG30015 - chr2R_8_10860001 chr2R_10860001 RAL-796 505 chr2R 10948026 10948062 chr2R 10955577 10955612 17.6 5 7550 1.5 2.5 2.0 1.7 7586 chr2R 10948026 intergenic not near genes chr2R 10951819 intergenic not near genes chr2R 10955612 intergenic not near genes chr2R_5_10950001 chr2R_10950001 RAL-796 506 chr2R 11009817 11009843 chr2R 11018991 11019016 roo 4 9174 2.0 4.0 3.0 1.0 9199 chr2R 11009817 intron luna - chr2R 11014416 intron luna - chr2R 11019016 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-796 507 chr2R 11179281 11179289 chr2R 11179365 11179375 5 86 3.0 4.5 3.8 1.0 94 chr2R 11179281 intron shn + chr2R 11179328 intron shn + chr2R 11179375 intron shn + chr2R_5_11175001 chr2R_11175001 RAL-796 508 chr2R 11207813 11207844 chr2R 11208005 11208035 BS 12 192 3.5 1.5 2.5 3.4 222 chr2R 11207813 intron shn + chr2R 11207924 intron shn + chr2R 11208035 intron shn + chr2R_12_11205001 chr2R_11205001 RAL-796 509 chr2R 11415529 11415549 chr2R 11418676 11418694 opus 8 3148 2.0 6.5 4.2 1.5 3165 chr2R 11415529 intron Drip - chr2R 11417112 intron Drip - chr2R 11418694 intron Drip - chr2R_8_11415001 chr2R_11415001 RAL-796 510 chr2R 11472652 11472679 chr2R 11473849 11473876 pogo 15 1197 3.5 6.0 4.8 2.6 1224 chr2R 11472652 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473876 intergenic not near genes chr2R_15_11470001 chr2R_11470001 RAL-796 511 chr2R 11480813 11480834 chr2R 11480896 11480917 5 83 0.0 1.5 0.8 2.8 104 chr2R 11480813 intron inv + chr2R 11480865 intron inv + chr2R 11480917 intron inv + chr2R_5_11480001 chr2R_11480001 RAL-796 512 chr2R 11951349 11951375 chr2R 11951426 11951452 4 77 3.0 4.5 3.8 0.8 103 chr2R 11951349 intron CG13188 + chr2R 11951400 intron CG13188 + chr2R 11951452 intron CG13188 + chr2R_4_11950001 chr2R_11950001 RAL-796 513 chr2R 12002184 12002202 chr2R 12002337 12002338 6 149 3.5 2.5 3.0 1.5 154 chr2R 12002184 3` UTR otk - chr2R 12002261 3` UTR otk - chr2R 12002338 intron otk - chr2R_6_12000001 chr2R_12000001 RAL-796 514 chr2R 12045300 12045329 chr2R 12045391 12045420 14 91 1.0 3.5 2.2 4.4 120 chr2R 12045300 intron Drep-1 + chr2R 12045360 intron Drep-1 + chr2R 12045420 intron Drep-1 + chr2R_14_12045001 chr2R_12045001 RAL-796 515 chr2R 12104679 12104700 chr2R 12104759 12104774 5 78 6.5 7.0 6.8 0.6 95 chr2R 12104679 intron jeb - chr2R 12104726 intron jeb - chr2R 12104774 intron jeb - chr2R_5_12100001 chr2R_12100001 RAL-796 516 chr2R 12146471 12146501 chr2R 12147591 12147623 5 1121 20.5 16.5 18.5 0.3 1152 chr2R 12146471 intron,3` UTR Hen1 +,CG8878 - chr2R 12147047 intron,exon Hen1 +,CG8878 - chr2R 12147623 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-796 517 chr2R 12145908 12145945 chr2R 12148607 12148638 11 2694 35.5 26.5 31.0 0.3 2730 chr2R 12145908 exon Hen1 + chr2R 12147273 intron,intron Hen1 +,CG8878 - chr2R 12148638 intron,exon Hen1 +,CG8878 - chr2R_11_12145001 chr2R_12145001 RAL-796 518 chr2R 12187475 12187507 chr2R 12190093 12190123 13 2617 70.5 43.5 57.0 0.2 2648 chr2R 12187475 exon Cyp6g1 + chr2R 12188799 exon Cyp6g2 - chr2R 12190123 exon Cyp6g2 - chr2R_13_12185001 chr2R_12185001 RAL-796 519 chr2R 12217577 12217601 chr2R 12217658 12217682 6 81 1.5 4.0 2.8 1.6 105 chr2R 12217577 intergenic not near genes chr2R 12217630 intergenic not near genes chr2R 12217682 intergenic not near genes chr2R_6_12215001 chr2R_12215001 RAL-796 520 chr2R 12501691 12501717 chr2R 12503853 12503879 Rt1c 4 2162 2.0 4.5 3.2 1.0 2188 chr2R 12501691 intron fdl - chr2R 12502785 intron fdl - chr2R 12503879 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-796 521 chr2R 12771334 12771348 chr2R 12771443 12771457 4 109 1.5 0.5 1.0 2.0 123 chr2R 12771334 intergenic not near genes chr2R 12771396 intergenic not near genes chr2R 12771457 intergenic not near genes chr2R_4_12770001 chr2R_12770001 RAL-796 522 chr2R 12789300 12789322 chr2R 12797661 12797672 roo 6 8358 1.5 2.0 1.8 2.1 8372 chr2R 12789300 intron,3` UTR sca +,CR45137 - chr2R 12793486 intron,intron sca +,CR45137 - chr2R 12797672 intron,3` UTR sca +,CR45137 - chr2R_6_12790001 chr2R_12790001 RAL-796 523 chr2R 12819451 12819479 chr2R 12824520 12824548 jockey 9 5068 2.5 2.5 2.5 2.6 5097 chr2R 12819451 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824548 intergenic not near genes chr2R_9_12820001 chr2R_12820001 RAL-796 524 chr2R 12988396 12988421 chr2R 12988500 12988502 8 101 0.0 1.0 0.5 5.3 106 chr2R 12988396 intergenic not near genes chr2R 12988449 intergenic not near genes chr2R 12988502 intergenic not near genes chr2R_8_12985001 chr2R_12985001 RAL-796 525 chr2R 13009898 13009910 chr2R 13009978 13009988 4 80 0.0 0.0 0.0 4.0 90 chr2R 13009898 intergenic not near genes chr2R 13009943 intergenic not near genes chr2R 13009988 intergenic not near genes chr2R_4_13005001 chr2R_13005001 RAL-796 526 chr2R 13081567 13081598 chr2R 13081724 13081752 8 156 2.5 2.5 2.5 2.3 185 chr2R 13081567 intergenic not near genes chr2R 13081660 intergenic not near genes chr2R 13081752 intergenic not near genes chr2R_8_13080001 chr2R_13080001 RAL-796 527 chr2R 13123156 13123184 chr2R 13123501 13123528 9 344 2.5 2.5 2.5 2.6 372 chr2R 13123156 5` UTR CG13325 + chr2R 13123342 exon CG13325 + chr2R 13123528 exon CG13325 + chr2R_9_13120001 chr2R_13120001 RAL-796 528 chr2R 13136840 13136870 chr2R 13141638 13141668 Doc 11 4796 2.0 2.5 2.2 3.4 4828 chr2R 13136840 exon Cap-G + chr2R 13139254 intron Cap-G + chr2R 13141668 intron Cap-G + chr2R_11_13135001 chr2R_13135001 RAL-796 529 chr2R 13167441 13167461 chr2R 13167534 13167555 5 94 3.5 0.0 1.8 1.8 114 chr2R 13167441 intron GLaz - chr2R 13167498 intron GLaz - chr2R 13167555 intron GLaz - chr2R_5_13165001 chr2R_13165001 RAL-796 530 chr2R 13431499 13431518 chr2R 13431578 13431597 8 79 0.5 2.5 1.5 3.2 98 chr2R 13431499 intron CG42321 - chr2R 13431548 intron CG42321 - chr2R 13431597 intron CG42321 - chr2R_8_13430001 chr2R_13430001 RAL-796 531 chr2R 13439109 13439230 chr2R 13439224 13439306 11 124 0.0 0.0 0.0 11.0 197 chr2R 13439109 intergenic CG42321 -,cnn - chr2R 13439208 intergenic cnn -,CG42321 - chr2R 13439306 intergenic cnn -,CG42321 - chr2R_11_13435001 chr2R_13435001 RAL-796 532 chr2R 13566259 13566281 chr2R 13566339 13566361 4 80 1.0 0.0 0.5 2.7 102 chr2R 13566259 intergenic not near genes chr2R 13566310 intergenic not near genes chr2R 13566361 intergenic not near genes chr2R_4_13565001 chr2R_13565001 RAL-796 533 chr2R 13580503 13580530 chr2R 13580853 13580880 jockey 7 350 0.0 5.0 2.5 2.0 377 chr2R 13580503 3` UTR CG6191 - chr2R 13580692 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580880 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_7_13580001 chr2R_13580001 RAL-796 534 chr2R 13752808 13752833 chr2R 13752905 13752931 6 98 2.0 2.5 2.2 1.9 123 chr2R 13752808 intergenic not near genes chr2R 13752870 intergenic not near genes chr2R 13752931 intergenic not near genes chr2R_6_13750001 chr2R_13750001 RAL-796 535 chr2R 14000236 14000256 chr2R 14000464 14000484 8 228 3.0 4.0 3.5 1.8 248 chr2R 14000236 intron mam + chr2R 14000360 intron mam + chr2R 14000484 intron mam + chr2R_8_14000001 chr2R_14000001 RAL-796 536 chr2R 14018162 14018194 chr2R 14018245 14018278 5 84 1.5 1.5 1.5 2.0 116 chr2R 14018162 intron mam + chr2R 14018220 intron mam + chr2R 14018278 intron mam + chr2R_5_14015001 chr2R_14015001 RAL-796 537 chr2R 14277578 14277605 chr2R 14277659 14277687 6 82 5.0 2.5 3.8 1.2 109 chr2R 14277578 5` UTR Ih + chr2R 14277632 5` UTR Ih + chr2R 14277687 5` UTR Ih + chr2R_6_14275001 chr2R_14275001 RAL-796 538 chr2R 14285043 14285051 chr2R 14285140 14285148 4 97 1.0 2.5 1.8 1.4 105 chr2R 14285043 intron Ih + chr2R 14285096 intron Ih + chr2R 14285148 intron Ih + chr2R_4_14285001 chr2R_14285001 RAL-796 539 chr2R 14294834 14294860 chr2R 14294914 14294940 11 80 3.0 5.0 4.0 2.2 106 chr2R 14294834 intron Ih + chr2R 14294887 intron Ih + chr2R 14294940 intron Ih + chr2R_11_14290001 chr2R_14290001 RAL-796 540 chr2R 14365310 14365328 chr2R 14365383 14365408 5 79 2.0 5.0 3.5 1.1 98 chr2R 14365310 exon Tfb1 + chr2R 14365359 3` UTR Tfb1 + chr2R 14365408 3` UTR Tfb1 + chr2R_5_14365001 chr2R_14365001 RAL-796 541 chr2R 14393868 14393899 chr2R 14393953 14393983 9 85 3.0 3.5 3.2 2.1 115 chr2R 14393868 intergenic not near genes chr2R 14393926 intergenic not near genes chr2R 14393983 intergenic not near genes chr2R_9_14390001 chr2R_14390001 RAL-796 542 chr2R 14467306 14467323 chr2R 14476464 14476481 roo 7 9158 2.5 4.5 3.5 1.6 9175 chr2R 14467306 intergenic not near genes chr2R 14471894 intergenic not near genes chr2R 14476481 5` UTR CR44462 + chr2R_7_14470001 chr2R_14470001 RAL-796 543 chr2R 14497390 14497408 chr2R 14498556 14498574 1360 4 1166 1.5 2.5 2.0 1.3 1184 chr2R 14497390 3` UTR Cpsf160 - chr2R 14497982 intron Cpsf160 - chr2R 14498574 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 RAL-796 544 chr2R 14530768 14530790 chr2R 14530847 14530869 11 79 2.0 4.5 3.2 2.6 101 chr2R 14530768 intron ttv + chr2R 14530818 intron ttv + chr2R 14530869 intron ttv + chr2R_11_14530001 chr2R_14530001 RAL-796 545 chr2R 14538962 14538989 chr2R 14539038 14539065 7 75 3.0 5.5 4.2 1.3 103 chr2R 14538962 intron ttv + chr2R 14539014 intron ttv + chr2R 14539065 intron ttv + chr2R_7_14535001 chr2R_14535001 RAL-796 546 chr2R 14565557 14565593 chr2R 14565634 14565670 10 77 2.5 1.0 1.8 3.6 113 chr2R 14565557 intron ttv + chr2R 14565614 intron ttv + chr2R 14565670 intron ttv + chr2R_10_14565001 chr2R_14565001 RAL-796 547 chr2R 14610245 14610275 chr2R 14610337 14610366 9 89 4.5 1.5 3.0 2.2 121 chr2R 14610245 exon Su(var)2-HP2 - chr2R 14610306 exon Su(var)2-HP2 - chr2R 14610366 exon Su(var)2-HP2 - chr2R_9_14610001 chr2R_14610001 RAL-796 548 chr2R 14799882 14799896 chr2R 14799958 14799972 4 76 0.5 5.5 3.0 1.0 90 chr2R 14799882 intron kn - chr2R 14799927 intron kn - chr2R 14799972 intron kn - chr2R_4_14795001 chr2R_14795001 RAL-796 549 chr2R 14889213 14889229 chr2R 14897821 14897837 Max-element 7 8608 6.0 0.5 3.2 1.7 8624 chr2R 14889213 intergenic Cyp6a8 - chr2R 14893525 intergenic not near genes chr2R 14897837 intergenic not near genes chr2R_7_14890001 chr2R_14890001 RAL-796 550 chr2R 14911700 14911721 chr2R 14911823 14911844 5 123 2.0 1.0 1.5 2.0 144 chr2R 14911700 intron CG10249 - chr2R 14911772 intron CG10249 - chr2R 14911844 intron CG10249 - chr2R_5_14910001 chr2R_14910001 RAL-796 551 chr2R 15004726 15004758 chr2R 15005055 15005087 jockey 12 329 2.0 1.5 1.8 4.3 361 chr2R 15004726 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005087 intergenic not near genes chr2R_12_15000001 chr2R_15000001 RAL-796 552 chr2R 15015459 15015484 chr2R 15022883 15022908 mdg1 7 7424 4.0 1.5 2.8 1.8 7449 chr2R 15015459 intron hbs + chr2R 15019184 intron hbs + chr2R 15022908 intron hbs + chr2R_7_15015001 chr2R_15015001 RAL-796 553 chr2R 15084977 15085000 chr2R 15092026 15092049 297 5 7049 3.0 1.5 2.2 1.6 7072 chr2R 15084977 intergenic not near genes chr2R 15088513 intergenic not near genes chr2R 15092049 5` UTR CR44457 + chr2R_5_15085001 chr2R_15085001 RAL-796 554 chr2R 15119320 15119348 chr2R 15127800 15127829 Tirant 6 8480 3.5 2.0 2.8 1.6 8509 chr2R 15119320 intron chn + chr2R 15123574 intron chn + chr2R 15127829 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-796 555 chr2R 15168275 15168300 chr2R 15168368 15168393 11 93 1.0 2.5 1.8 3.9 118 chr2R 15168275 intron igl + chr2R 15168334 intron igl + chr2R 15168393 intron igl + chr2R_11_15165001 chr2R_15165001 RAL-796 556 chr2R 15235066 15235094 chr2R 15235180 15235208 10 114 2.0 2.5 2.2 3.1 142 chr2R 15235066 intron Fs - chr2R 15235137 intron Fs - chr2R 15235208 intron Fs - chr2R_10_15235001 chr2R_15235001 RAL-796 557 chr2R 15295858 15295888 chr2R 15296005 15296035 18 146 3.0 3.5 3.2 4.3 177 chr2R 15295858 intron Trpm - chr2R 15295946 intron Trpm - chr2R 15296035 intron Trpm - chr2R_18_15295001 chr2R_15295001 RAL-796 558 chr2R 15296164 15296171 chr2R 15296246 15296254 4 83 5.0 3.5 4.2 0.8 90 chr2R 15296164 intron Trpm - chr2R 15296209 intron Trpm - chr2R 15296254 intron Trpm - chr2R_4_15295001 chr2R_15295001 RAL-796 559 chr2R 15387322 15387352 chr2R 15387414 15387444 10 92 2.0 5.0 3.5 2.2 122 chr2R 15387322 3` UTR SRPK + chr2R 15387383 3` UTR SRPK + chr2R 15387444 3` UTR SRPK + chr2R_10_15385001 chr2R_15385001 RAL-796 560 chr2R 15577446 15577476 chr2R 15577529 15577537 10 78 4.5 1.0 2.8 2.6 91 chr2R 15577446 intergenic not near genes chr2R 15577492 intergenic not near genes chr2R 15577537 intergenic not near genes chr2R_10_15575001 chr2R_15575001 RAL-796 561 chr2R 15655985 15656014 chr2R 15656065 15656094 12 80 2.5 2.0 2.2 3.8 109 chr2R 15655985 intron CG42524 + chr2R 15656040 intron CG42524 + chr2R 15656094 intron CG42524 + chr2R_12_15655001 chr2R_15655001 RAL-796 562 chr2R 15786514 15786535 chr2R 15786672 15786693 8 158 2.5 5.5 4.0 1.6 179 chr2R 15786514 intron Zasp52 - chr2R 15786604 intron Zasp52 - chr2R 15786693 intron Zasp52 - chr2R_8_15785001 chr2R_15785001 RAL-796 563 chr2R 15794870 15794897 chr2R 15794960 15794987 4 90 1.5 0.0 0.8 2.2 117 chr2R 15794870 intron,5` UTR Zasp52 -,tun + chr2R 15794928 intron,5` UTR Zasp52 -,tun + chr2R 15794987 intron,intron Zasp52 -,tun + chr2R_4_15790001 chr2R_15790001 RAL-796 564 chr2R 15847611 15847628 chr2R 15847687 15847705 9 77 2.0 4.0 3.0 2.2 94 chr2R 15847611 intron tun + chr2R 15847658 intron tun + chr2R 15847705 intron tun + chr2R_9_15845001 chr2R_15845001 RAL-796 565 chr2R 15858081 15858102 chr2R 15858164 15858185 6 83 3.5 1.0 2.2 1.9 104 chr2R 15858081 intron Gpo-1 - chr2R 15858133 intron Gpo-1 - chr2R 15858185 intron Gpo-1 - chr2R_6_15855001 chr2R_15855001 RAL-796 566 chr2R 15914871 15914906 chr2R 15915139 15915174 11 268 2.0 1.5 1.8 3.9 303 chr2R 15914871 intron sli - chr2R 15915022 intron sli - chr2R 15915174 intron sli - chr2R_11_15915001 chr2R_15915001 RAL-796 567 chr2R 15922585 15922604 chr2R 15922661 15922680 5 76 2.0 0.5 1.2 2.3 95 chr2R 15922585 intergenic bdg -,sli - chr2R 15922632 intergenic bdg - chr2R 15922680 intergenic bdg - chr2R_5_15920001 chr2R_15920001 RAL-796 568 chr2R 15941669 15941690 chr2R 15941754 15941774 11 83 8.0 5.5 6.8 1.4 105 chr2R 15941669 intergenic CG8299 - chr2R 15941722 intergenic CG8299 - chr2R 15941774 intergenic CG8299 - chr2R_11_15940001 chr2R_15940001 RAL-796 569 chr2R 16257230 16257249 chr2R 16257335 16257353 4 105 2.0 3.0 2.5 1.1 123 chr2R 16257230 intron CngA - chr2R 16257292 intron CngA - chr2R 16257353 intron CngA - chr2R_4_16255001 chr2R_16255001 RAL-796 570 chr2R 16299076 16299087 chr2R 16299135 16299148 5 56 0.5 5.5 3.0 1.2 72 chr2R 16299076 intergenic CG43265 - chr2R 16299112 intergenic CG43265 - chr2R 16299148 intergenic CG43265 - chr2R_5_16295001 chr2R_16295001 RAL-796 571 chr2R 16380119 16380147 chr2R 16380217 16380245 8 98 2.5 0.0 1.2 3.6 126 chr2R 16380119 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380182 3` UTR CR45317 - chr2R 16380245 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_8_16380001 chr2R_16380001 RAL-796 572 chr2R 16518057 16518065 chr2R 16518133 16518137 5 75 2.5 5.0 3.8 1.0 80 chr2R 16518057 intron Sema-2a + chr2R 16518097 intron Sema-2a + chr2R 16518137 intron Sema-2a + chr2R_5_16515001 chr2R_16515001 RAL-796 573 chr2R 16539638 16539654 chr2R 16544847 16544863 copia 4 5209 0.0 0.0 0.0 4.0 5225 chr2R 16539638 intergenic not near genes chr2R 16542250 intergenic not near genes chr2R 16544863 intergenic not near genes chr2R_4_16540001 chr2R_16540001 RAL-796 574 chr2R 16614137 16614156 chr2R 16614356 16614375 4 219 2.0 1.0 1.5 1.6 238 chr2R 16614137 intron CG5065 + chr2R 16614256 intron CG5065 + chr2R 16614375 intron CG5065 + chr2R_4_16610001 chr2R_16610001 RAL-796 575 chr2R 16617063 16617090 chr2R 16617142 16617169 14 79 0.0 1.5 0.8 7.8 106 chr2R 16617063 intron CG5065 + chr2R 16617116 intron CG5065 + chr2R 16617169 intron CG5065 + chr2R_14_16615001 chr2R_16615001 RAL-796 576 chr2R 16722128 16722142 chr2R 16722370 16722385 7 243 2.0 5.5 3.8 1.5 257 chr2R 16722128 intron CG30463 - chr2R 16722256 intron CG30463 - chr2R 16722385 intron CG30463 - chr2R_7_16720001 chr2R_16720001 RAL-796 577 chr2R 16775664 16775675 chr2R 16775931 16775937 5 266 0.5 4.0 2.2 1.6 273 chr2R 16775664 3` UTR Arp53D + chr2R 16775800 intergenic Arp53D + chr2R 16775937 intergenic Arp53D + chr2R_5_16775001 chr2R_16775001 RAL-796 578 chr2R 16787474 16787492 chr2R 16787556 16787574 4 82 1.5 0.0 0.8 2.2 100 chr2R 16787474 intron CG5522 + chr2R 16787524 intron CG5522 + chr2R 16787574 intron CG5522 + chr2R_4_16785001 chr2R_16785001 RAL-796 579 chr2R 16800051 16800072 chr2R 16800132 16800153 5 81 0.0 0.0 0.0 5.0 102 chr2R 16800051 intergenic not near genes chr2R 16800102 intergenic not near genes chr2R 16800153 intergenic not near genes chr2R_5_16800001 chr2R_16800001 RAL-796 580 chr2R 16880034 16880064 chr2R 16880110 16880140 6 76 2.5 0.5 1.5 2.4 106 chr2R 16880034 intron CG8910 - chr2R 16880087 intron CG8910 - chr2R 16880140 intron CG8910 - chr2R_6_16880001 chr2R_16880001 RAL-796 581 chr2R 16910236 16910246 chr2R 16910330 16910345 5 98 2.0 5.0 3.5 1.1 109 chr2R 16910236 intergenic not near genes chr2R 16910290 intergenic not near genes chr2R 16910345 intergenic not near genes chr2R_5_16910001 chr2R_16910001 RAL-796 582 chr2R 16918100 16918114 chr2R 16918573 16918592 7 474 6.0 0.0 3.0 1.8 492 chr2R 16918100 intergenic not near genes chr2R 16918346 intergenic not near genes chr2R 16918592 intergenic not near genes chr2R_7_16915001 chr2R_16915001 RAL-796 583 chr2R 17048621 17048631 chr2R 17048700 17048710 4 79 1.5 0.5 1.0 2.0 89 chr2R 17048621 3` UTR CG9642 + chr2R 17048666 3` UTR CG9642 + chr2R 17048710 3` UTR CG9642 + chr2R_4_17045001 chr2R_17045001 RAL-796 584 chr2R 17147244 17147267 chr2R 17152275 17152298 jockey 6 5031 4.5 3.0 3.8 1.2 5054 chr2R 17147244 intergenic not near genes chr2R 17149771 intergenic not near genes chr2R 17152298 intergenic not near genes chr2R_6_17145001 chr2R_17145001 RAL-796 585 chr2R 17176370 17176381 chr2R 17182560 17182571 diver 4 6190 0.0 0.0 0.0 4.0 6201 chr2R 17176370 intergenic not near genes chr2R 17179470 intergenic not near genes chr2R 17182571 intergenic not near genes chr2R_4_17175001 chr2R_17175001 RAL-796 586 chr2R 17236515 17236539 chr2R 17241719 17241743 copia 6 5204 2.5 4.0 3.2 1.4 5228 chr2R 17236515 intron mbl + chr2R 17239129 intron mbl + chr2R 17241743 intron mbl + chr2R_6_17235001 chr2R_17235001 RAL-796 587 chr2R 17459005 17459033 chr2R 17459090 17459118 9 85 4.5 1.0 2.8 2.4 113 chr2R 17459005 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459118 intron CG14478 + chr2R_9_17455001 chr2R_17455001 RAL-796 588 chr2R 17485913 17485933 chr2R 17490675 17490695 F-element 4 4762 2.5 0.0 1.2 1.8 4782 chr2R 17485913 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488304 intron NT5E-2 + chr2R 17490695 intron NT5E-2 + chr2R_4_17485001 chr2R_17485001 RAL-796 589 chr2R 17709983 17710117 chr2R 17710074 17710195 4 81 0.5 0.5 0.5 2.7 212 chr2R 17709983 intron CG6424 - chr2R 17710089 intron CG6424 - chr2R 17710195 intron CG6424 - chr2R_4_17710001 chr2R_17710001 RAL-796 590 chr2R 17784025 17784057 chr2R 17784265 17784298 pogo 11 239 2.5 2.0 2.2 3.4 273 chr2R 17784025 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784298 intergenic mir-31a - chr2R_11_17780001 chr2R_17780001 RAL-796 591 chr2R 17898854 17898889 chr2R 17898944 17898978 8 90 1.5 1.5 1.5 3.2 124 chr2R 17898854 intron Elk + chr2R 17898916 intron Elk + chr2R 17898978 intron Elk + chr2R_8_17895001 chr2R_17895001 RAL-796 592 chr2R 17922679 17922708 chr2R 17922806 17922835 12 127 0.5 3.5 2.0 4.0 156 chr2R 17922679 intron Elk + chr2R 17922757 intron Elk + chr2R 17922835 intron Elk + chr2R_12_17920001 chr2R_17920001 RAL-796 593 chr2R 18358394 18358423 chr2R 18372606 18372635 roo 6 14212 2.5 0.0 1.2 2.7 14241 chr2R 18358394 intergenic not near genes chr2R 18365514 intergenic not near genes chr2R 18372635 intergenic not near genes chr2R_6_18365001 chr2R_18365001 RAL-796 594 chr2R 18408926 18408957 chr2R 18409021 18409052 22 94 5.0 4.0 4.5 4.0 126 chr2R 18408926 3` UTR GstE8 + chr2R 18408989 intergenic GstE8 +,GstE9 + chr2R 18409052 5` UTR GstE9 + chr2R_22_18405001 chr2R_18405001 RAL-796 595 chr2R 18526599 18526624 chr2R 18526672 18526706 10 80 2.0 2.0 2.0 3.3 107 chr2R 18526599 intergenic CG43066 + chr2R 18526652 intergenic CG43066 + chr2R 18526706 intergenic CG43066 + chr2R_10_18525001 chr2R_18525001 RAL-796 596 chr2R 18575155 18575164 chr2R 18575372 18575381 5 217 1.5 3.0 2.2 1.6 226 chr2R 18575155 intron GEFmeso - chr2R 18575268 intron GEFmeso - chr2R 18575381 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-796 597 chr2R 18575803 18575811 chr2R 18581990 18581999 3S18 4 6188 6.5 5.5 6.0 0.6 6196 chr2R 18575803 intron GEFmeso - chr2R 18578901 intron GEFmeso - chr2R 18581999 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 RAL-796 598 chr2R 18575814 18575830 chr2R 18581987 18582018 3S18 9 6185 3.5 5.0 4.2 1.7 6204 chr2R 18575814 intron GEFmeso - chr2R 18578916 intron GEFmeso - chr2R 18582018 intron GEFmeso - chr2R_9_18575001 chr2R_18575001 RAL-796 599 chr2R 18590882 18590901 chr2R 18600034 18600053 roo 7 9151 2.0 3.0 2.5 2.0 9171 chr2R 18590882 intron GEFmeso - chr2R 18595468 intron GEFmeso - chr2R 18600053 intron GEFmeso - chr2R_7_18595001 chr2R_18595001 RAL-796 600 chr2R 18602856 18602867 chr2R 18602938 18602949 7 82 1.0 5.5 3.2 1.7 93 chr2R 18602856 intron GEFmeso - chr2R 18602902 intron GEFmeso - chr2R 18602949 intron GEFmeso - chr2R_7_18600001 chr2R_18600001 RAL-796 601 chr2R 18692900 18692921 chr2R 18692987 18693008 8 86 2.0 1.5 1.8 2.9 108 chr2R 18692900 intron Sik3 + chr2R 18692954 intron Sik3 + chr2R 18693008 intron Sik3 + chr2R_8_18690001 chr2R_18690001 RAL-796 602 chr2R 18726888 18727093 chr2R 18726971 18727266 20 119 6.5 2.5 4.5 3.6 378 chr2R 18726888 intron Hs3st-A + chr2R 18727077 intron Hs3st-A + chr2R 18727266 intron Hs3st-A + chr2R_20_18725001 chr2R_18725001 RAL-796 603 chr2R 18727099 18727102 chr2R 18727272 18727275 4 173 4.5 7.0 5.8 0.6 176 chr2R 18727099 intron Hs3st-A + chr2R 18727187 intron Hs3st-A + chr2R 18727275 intron Hs3st-A + chr2R_4_18725001 chr2R_18725001 RAL-796 604 chr2R 18883704 18883733 chr2R 18883784 18883813 11 79 1.0 4.0 2.5 3.1 109 chr2R 18883704 intron sano + chr2R 18883758 intron sano + chr2R 18883813 intron sano + chr2R_11_18880001 chr2R_18880001 RAL-796 605 chr2R 18926507 18926529 chr2R 18926594 18926616 8 87 0.5 0.5 0.5 5.3 109 chr2R 18926507 intron sano + chr2R 18926562 intron sano + chr2R 18926616 intron sano + chr2R_8_18925001 chr2R_18925001 RAL-796 606 chr2R 18964917 18964950 chr2R 18964993 18965026 12 76 2.5 1.5 2.0 4.0 109 chr2R 18964917 intergenic not near genes chr2R 18964972 intergenic not near genes chr2R 18965026 intergenic not near genes chr2R_12_18960001 chr2R_18960001 RAL-796 607 chr2R 19012935 19012970 chr2R 19013029 19013060 23 93 2.5 5.0 3.8 4.8 125 chr2R 19012935 intergenic not near genes chr2R 19012998 intergenic not near genes chr2R 19013060 intergenic not near genes chr2R_23_19010001 chr2R_19010001 RAL-796 608 chr2R 19067724 19067737 chr2R 19067800 19067813 4 76 0.5 0.5 0.5 2.7 89 chr2R 19067724 intron 5-HT1A + chr2R 19067768 intron 5-HT1A + chr2R 19067813 intron 5-HT1A + chr2R_4_19065001 chr2R_19065001 RAL-796 609 chr2R 19169540 19169566 chr2R 19169730 19169756 6 190 1.0 1.5 1.2 2.7 216 chr2R 19169540 intron CG10737 + chr2R 19169648 intron CG10737 + chr2R 19169756 intron CG10737 + chr2R_6_19165001 chr2R_19165001 RAL-796 610 chr2R 19300962 19300994 chr2R 19301045 19301077 21 83 0.0 4.5 2.2 6.6 115 chr2R 19300962 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301077 intron Tab2 + chr2R_21_19300001 chr2R_19300001 RAL-796 611 chr2R 19374571 19374603 chr2R 19374654 19374686 5 83 0.5 2.5 1.5 2.0 115 chr2R 19374571 intergenic not near genes chr2R 19374628 intergenic not near genes chr2R 19374686 intergenic not near genes chr2R_5_19370001 chr2R_19370001 RAL-796 612 chr2R 19532717 19532749 chr2R 19532798 19532831 13 81 1.5 4.0 2.8 3.4 114 chr2R 19532717 intron sm - chr2R 19532774 intron sm - chr2R 19532831 intron sm - chr2R_13_19530001 chr2R_19530001 RAL-796 613 chr2R 19624208 19624238 chr2R 19624553 19624583 9 344 2.5 4.0 3.2 2.1 375 chr2R 19624208 intron sm - chr2R 19624396 intron sm - chr2R 19624583 intron sm - chr2R_9_19620001 chr2R_19620001 RAL-796 614 chr2R 19776592 19776630 chr2R 19779915 19779953 jockey 10 3323 2.5 3.5 3.0 2.5 3361 chr2R 19776592 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779953 intergenic not near genes chr2R_10_19775001 chr2R_19775001 RAL-796 615 chr2R 19794868 19794896 chr2R 19794970 19795001 8 102 1.0 1.5 1.2 3.6 133 chr2R 19794868 intergenic not near genes chr2R 19794934 intergenic not near genes chr2R 19795001 intergenic not near genes chr2R_8_19790001 chr2R_19790001 RAL-796 616 chr2R 19807671 19807695 chr2R 19807752 19807777 6 81 2.0 2.0 2.0 2.0 106 chr2R 19807671 intergenic not near genes chr2R 19807724 intergenic not near genes chr2R 19807777 intergenic not near genes chr2R_6_19805001 chr2R_19805001 RAL-796 617 chr2R 19914846 19914868 chr2R 19922258 19922279 mdg1 4 7412 4.0 1.0 2.5 1.1 7433 chr2R 19914846 intergenic not near genes chr2R 19918562 intergenic not near genes chr2R 19922279 intergenic not near genes chr2R_4_19915001 chr2R_19915001 RAL-796 618 chr2R 19957433 19957464 chr2R 19962633 19962663 copia 6 5201 1.5 5.0 3.2 1.4 5230 chr2R 19957433 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962663 intergenic not near genes chr2R_6_19960001 chr2R_19960001 RAL-796 619 chr2R 20118877 20118902 chr2R 20118964 20118989 6 87 2.0 2.5 2.2 1.9 112 chr2R 20118877 intergenic not near genes chr2R 20118933 intergenic not near genes chr2R 20118989 intergenic not near genes chr2R_6_20115001 chr2R_20115001 RAL-796 620 chr2R 20196753 20196783 chr2R 20196862 20196865 4 102 1.0 0.0 0.5 2.7 112 chr2R 20196753 intergenic not near genes chr2R 20196809 intergenic not near genes chr2R 20196865 intergenic not near genes chr2R_4_20195001 chr2R_20195001 RAL-796 621 chr2R 20199224 20199243 chr2R 20199301 20199320 5 77 2.0 2.0 2.0 1.7 96 chr2R 20199224 intergenic not near genes chr2R 20199272 intergenic not near genes chr2R 20199320 intergenic not near genes chr2R_5_20195001 chr2R_20195001 RAL-796 622 chr2R 20203080 20203099 chr2R 20203316 20203336 5 237 4.0 1.5 2.8 1.3 256 chr2R 20203080 intergenic not near genes chr2R 20203208 intergenic not near genes chr2R 20203336 intergenic not near genes chr2R_5_20200001 chr2R_20200001 RAL-796 623 chr2R 20320743 20320773 chr2R 20320826 20320855 11 83 1.5 3.0 2.2 3.4 112 chr2R 20320743 intron CG8920 + chr2R 20320799 intron CG8920 + chr2R 20320855 intron CG8920 + chr2R_11_20320001 chr2R_20320001 RAL-796 624 chr2R 20395359 20395392 chr2R 20395616 20395647 5 256 1.0 3.0 2.0 1.7 288 chr2R 20395359 intergenic not near genes chr2R 20395503 intergenic not near genes chr2R 20395647 intergenic not near genes chr2R_5_20395001 chr2R_20395001 RAL-796 625 chr2R 20523053 20523055 chr2R 20523160 20523166 5 110 3.5 4.5 4.0 1.0 113 chr2R 20523053 intergenic not near genes chr2R 20523110 intergenic not near genes chr2R 20523166 intergenic not near genes chr2R_5_20520001 chr2R_20520001 RAL-796 626 chr2R 20542001 20542012 chr2R 20542079 20542089 4 78 3.0 4.5 3.8 0.8 88 chr2R 20542001 intergenic not near genes chr2R 20542045 intergenic not near genes chr2R 20542089 intergenic not near genes chr2R_4_20540001 chr2R_20540001 RAL-796 627 chr2R 20678213 20678227 chr2R 20678343 20678357 7 130 1.0 5.5 3.2 1.7 144 chr2R 20678213 intergenic not near genes chr2R 20678285 intergenic not near genes chr2R 20678357 intergenic not near genes chr2R_7_20675001 chr2R_20675001 RAL-796 628 chr2R 20739445 20739471 chr2R 20744213 20744239 F-element 6 4768 1.5 4.0 2.8 1.6 4794 chr2R 20739445 intron dpr + chr2R 20741842 intron dpr + chr2R 20744239 intron dpr + chr2R_6_20740001 chr2R_20740001 RAL-796 629 chr2R 20783317 20783326 chr2R 20788089 20788098 F-element 4 4772 2.0 6.5 4.2 0.8 4781 chr2R 20783317 intergenic not near genes chr2R 20785708 intergenic not near genes chr2R 20788098 intergenic CG43666 - chr2R_4_20785001 chr2R_20785001 RAL-796 630 chr2R 20809221 20809233 chr2R 20809486 20809498 4 264 6.5 3.5 5.0 0.7 277 chr2R 20809221 intergenic not near genes chr2R 20809360 intergenic not near genes chr2R 20809498 intergenic not near genes chr2R_4_20805001 chr2R_20805001 RAL-796 631 chr2R 21110790 21110821 chr2R 21110882 21110911 16 91 3.0 3.5 3.2 3.8 121 chr2R 21110790 intron ktub + chr2R 21110850 intron ktub + chr2R 21110911 intron ktub + chr2R_16_21110001 chr2R_21110001 RAL-796 632 chr2R 21116738 21116746 chr2R 21116805 21116823 4 76 2.0 3.0 2.5 1.1 85 chr2R 21116738 intron ktub + chr2R 21116780 intron ktub + chr2R 21116823 intron ktub + chr2R_4_21115001 chr2R_21115001 RAL-796 633 chr2R 21151130 21151134 chr2R 21153763 21153765 opus 4 2632 0.0 1.5 0.8 2.2 2635 chr2R 21151130 intron CG30389 - chr2R 21152448 intron CG30389 - chr2R 21153765 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-796 634 chr2R 21344442 21344468 chr2R 21344527 21344548 9 85 4.0 4.0 4.0 1.8 106 chr2R 21344442 exon CG15666 + chr2R 21344495 intron CG15666 + chr2R 21344548 intron CG15666 + chr2R_9_21340001 chr2R_21340001 RAL-796 635 chr2R 21421341 21421353 chr2R 21421420 21421432 8 78 3.5 6.5 5.0 1.3 91 chr2R 21421341 intron Sdc - chr2R 21421386 intron Sdc - chr2R 21421432 intron Sdc - chr2R_8_21420001 chr2R_21420001 RAL-796 636 chr2R 21455086 21455116 chr2R 21455449 21455479 10 362 1.5 4.0 2.8 2.6 393 chr2R 21455086 intron Sdc - chr2R 21455282 intron Sdc - chr2R 21455479 intron Sdc - chr2R_10_21455001 chr2R_21455001 RAL-796 637 chr2R 21721578 21721586 chr2R 21721665 21721674 4 88 6.0 0.0 3.0 1.0 96 chr2R 21721578 intron LBR + chr2R 21721626 intron LBR + chr2R 21721674 intron LBR + chr2R_4_21720001 chr2R_21720001 RAL-796 638 chr2R 21738282 21738309 chr2R 21747441 21747469 roo 8 9156 1.0 2.0 1.5 3.2 9187 chr2R 21738282 intergenic not near genes chr2R 21742876 intergenic not near genes chr2R 21747469 intergenic not near genes chr2R_8_21740001 chr2R_21740001 RAL-796 639 chr2R 21753092 21753117 chr2R 21753577 21753602 roo 8 484 5.5 5.5 5.5 1.2 510 chr2R 21753092 intergenic not near genes chr2R 21753347 intergenic not near genes chr2R 21753602 intergenic not near genes chr2R_8_21750001 chr2R_21750001 RAL-796 640 chr2R 21809525 21809557 chr2R 21817765 21817797 roo 17 8239 1.5 3.5 2.5 4.9 8272 chr2R 21809525 intergenic not near genes chr2R 21813661 intergenic not near genes chr2R 21817797 intergenic not near genes chr2R_17_21810001 chr2R_21810001 RAL-796 641 chr2R 21857354 21857371 chr2R 21857445 21857462 5 91 4.0 4.0 4.0 1.0 108 chr2R 21857354 intergenic not near genes chr2R 21857408 intergenic not near genes chr2R 21857462 intergenic not near genes chr2R_5_21855001 chr2R_21855001 RAL-796 642 chr2R 21878534 21878565 chr2R 21878620 21878651 8 86 3.0 3.0 3.0 2.0 117 chr2R 21878534 intron Fili + chr2R 21878592 intron Fili + chr2R 21878651 intron Fili + chr2R_8_21875001 chr2R_21875001 RAL-796 643 chr2R 21935648 21935675 chr2R 21935726 21935750 14 77 3.5 3.0 3.2 3.3 102 chr2R 21935648 intron,intron Fili +,CG43742 - chr2R 21935699 intron,exon Fili +,CG43742 - chr2R 21935750 intron,intron Fili +,CG43742 - chr2R_14_21935001 chr2R_21935001 RAL-796 644 chr2R 21993375 21993391 chr2R 21993466 21993482 6 91 2.5 0.5 1.5 2.4 107 chr2R 21993375 intron CG34370 - chr2R 21993428 intron CG34370 - chr2R 21993482 intron CG34370 - chr2R_6_21990001 chr2R_21990001 RAL-796 645 chr2R 22025643 22025674 chr2R 22025740 22025771 13 96 5.0 3.0 4.0 2.6 128 chr2R 22025643 intron CG34370 - chr2R 22025707 intron CG34370 - chr2R 22025771 intron CG34370 - chr2R_13_22025001 chr2R_22025001 RAL-796 646 chr2R 22272079 22272101 chr2R 22272181 22272203 6 102 3.0 6.0 4.5 1.1 124 chr2R 22272079 intron dve + chr2R 22272141 intron dve + chr2R 22272203 intron dve + chr2R_6_22270001 chr2R_22270001 RAL-796 647 chr2R 22312775 22312798 chr2R 22312901 22312924 7 125 5.0 0.5 2.8 1.8 149 chr2R 22312775 intergenic CR44758 + chr2R 22312850 intergenic CR44758 + chr2R 22312924 5` UTR CR44758 + chr2R_7_22310001 chr2R_22310001 RAL-796 648 chr2R 22349690 22349721 chr2R 22351474 22351505 jockey 9 1783 5.0 4.0 4.5 1.6 1815 chr2R 22349690 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351505 intron Liprin-gamma - chr2R_9_22350001 chr2R_22350001 RAL-796 649 chr2R 22360384 22360393 chr2R 22360817 22360825 jockey 5 433 7.0 2.5 4.8 0.9 441 chr2R 22360384 intron Liprin-gamma - chr2R 22360604 intron Liprin-gamma - chr2R 22360825 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-796 650 chr2R 22503874 22503894 chr2R 22503969 22503989 4 95 0.5 3.0 1.8 1.4 115 chr2R 22503874 intron px - chr2R 22503932 intron px - chr2R 22503989 intron px - chr2R_4_22500001 chr2R_22500001 RAL-796 651 chr2R 22512858 22512881 chr2R 22512939 22512962 12 81 2.0 5.5 3.8 2.5 104 chr2R 22512858 intron px - chr2R 22512910 intron px - chr2R 22512962 intron px - chr2R_12_22510001 chr2R_22510001 RAL-796 652 chr2R 22525757 22525779 chr2R 22529312 22529334 jockey 8 3555 2.5 3.0 2.8 2.1 3577 chr2R 22525757 intron px - chr2R 22527546 intron px - chr2R 22529334 intron px - chr2R_8_22525001 chr2R_22525001 RAL-796 653 chr2R 22574172 22574189 chr2R 22574252 22574269 5 80 1.0 2.5 1.8 1.8 97 chr2R 22574172 intron dnr1 - chr2R 22574220 intron dnr1 - chr2R 22574269 intron dnr1 - chr2R_5_22570001 chr2R_22570001 RAL-796 654 chr2R 22575682 22575696 chr2R 22575741 22575775 7 76 2.0 1.0 1.5 2.8 93 chr2R 22575682 intron dnr1 - chr2R 22575728 intron dnr1 - chr2R 22575775 intron dnr1 - chr2R_7_22575001 chr2R_22575001 RAL-796 655 chr2R 22620828 22620859 chr2R 22620928 22620953 19 99 0.0 3.5 1.8 6.8 125 chr2R 22620828 5` UTR CG33143 + chr2R 22620890 5` UTR CG33143 + chr2R 22620953 5` UTR CG33143 + chr2R_19_22620001 chr2R_22620001 RAL-796 656 chr2R 22623451 22623475 chr2R 22623591 22623615 9 140 5.0 2.5 3.8 1.9 164 chr2R 22623451 intron CG33143 + chr2R 22623533 intron CG33143 + chr2R 22623615 intron CG33143 + chr2R_9_22620001 chr2R_22620001 RAL-796 657 chr2R 22649844 22649856 chr2R 22649934 22649940 4 88 2.0 6.0 4.0 0.8 96 chr2R 22649844 intergenic CG3746 - chr2R 22649892 intergenic CG3746 - chr2R 22649940 intergenic CG3746 - chr2R_4_22645001 chr2R_22645001 RAL-796 658 chr2R 22666594 22666608 chr2R 22666672 22666688 5 79 6.5 0.0 3.2 1.2 94 chr2R 22666594 3` UTR,intron CR45269 -,CR42868 + chr2R 22666641 5` UTR CR42868 + chr2R 22666688 5` UTR CR42868 + chr2R_5_22665001 chr2R_22665001 RAL-796 659 chr2R 22774970 22775002 chr2R 22775389 22775421 jockey 15 418 5.5 7.5 6.5 2.0 451 chr2R 22774970 intron CG42260 - chr2R 22775196 intron CG42260 - chr2R 22775421 intron CG42260 - chr2R_15_22775001 chr2R_22775001 RAL-796 660 chr2R 22843018 22843053 chr2R 22844982 22845015 flea 4 1962 3.5 3.0 3.2 1.0 1997 chr2R 22843018 intergenic CG9826 + chr2R 22844016 intergenic not near genes chr2R 22845015 intergenic not near genes chr2R_4_22840001 chr2R_22840001 RAL-796 661 chr2R 22868267 22868282 chr2R 22868370 22868395 6 111 3.0 2.0 2.5 1.7 128 chr2R 22868267 5` UTR fd59A + chr2R 22868331 5` UTR fd59A + chr2R 22868395 5` UTR fd59A + chr2R_6_22865001 chr2R_22865001 RAL-796 662 chr2R 22907403 22907434 chr2R 22907496 22907527 5 92 1.0 1.5 1.2 2.3 124 chr2R 22907403 intron nahoda + chr2R 22907465 intron nahoda + chr2R 22907527 intron nahoda + chr2R_5_22905001 chr2R_22905001 RAL-796 663 chr2R 22925819 22925851 chr2R 22926140 22926173 4 326 25.0 19.0 22.0 0.2 354 chr2R 22925819 intron CG42678 + chr2R 22925996 intron CG42678 + chr2R 22926173 intron CG42678 + chr2R_4_22925001 chr2R_22925001 RAL-796 664 chr2R 22941819 22941855 chr2R 22941898 22941933 5 79 0.5 1.0 0.8 2.8 114 chr2R 22941819 intergenic CG42694 + chr2R 22941876 5` UTR CG42694 + chr2R 22941933 5` UTR CG42694 + chr2R_5_22940001 chr2R_22940001 RAL-796 665 chr2R 22971499 22971526 chr2R 22971578 22971604 11 79 1.5 2.0 1.8 3.9 105 chr2R 22971499 intergenic not near genes chr2R 22971552 intergenic not near genes chr2R 22971604 intergenic not near genes chr2R_11_22970001 chr2R_22970001 RAL-796 666 chr2R 23029613 23029635 chr2R 23029689 23029712 12 77 2.5 3.0 2.8 3.2 99 chr2R 23029613 intron,intron twi +,CG42741 - chr2R 23029662 intron,intron twi +,CG42741 - chr2R 23029712 intron,intron twi +,CG42741 - chr2R_12_23025001 chr2R_23025001 RAL-796 667 chr2R 23045342 23045353 chr2R 23045555 23045567 6 214 6.0 2.5 4.2 1.2 225 chr2R 23045342 intron twi + chr2R 23045454 intron twi + chr2R 23045567 intron twi + chr2R_6_23045001 chr2R_23045001 RAL-796 668 chr2R 23052652 23052684 chr2R 23052728 23052760 11 76 2.0 2.0 2.0 3.7 108 chr2R 23052652 intergenic not near genes chr2R 23052706 intergenic not near genes chr2R 23052760 intergenic not near genes chr2R_11_23050001 chr2R_23050001 RAL-796 669 chr2R 23061780 23061788 chr2R 23061866 23061882 4 92 2.5 3.5 3.0 1.0 102 chr2R 23061780 3` UTR l(2)06496 - chr2R 23061831 3` UTR l(2)06496 - chr2R 23061882 3` UTR l(2)06496 - chr2R_4_23060001 chr2R_23060001 RAL-796 670 chr2R 23122831 23122859 chr2R 23123250 23123283 8 423 3.5 6.0 4.8 1.4 452 chr2R 23122831 intergenic not near genes chr2R 23123057 intergenic not near genes chr2R 23123283 intergenic not near genes chr2R_8_23120001 chr2R_23120001 RAL-796 671 chr2R 23175038 23175061 chr2R 23175115 23175138 5 76 3.5 3.0 3.2 1.2 100 chr2R 23175038 intron CG34371 - chr2R 23175088 intron CG34371 - chr2R 23175138 intron CG34371 - chr2R_5_23175001 chr2R_23175001 RAL-796 672 chr2R 23236823 23236990 chr2R 23236915 23237082 13 92 0.0 0.0 0.0 13.0 259 chr2R 23236823 intergenic not near genes chr2R 23236952 intergenic not near genes chr2R 23237082 intergenic not near genes chr2R_13_23235001 chr2R_23235001 RAL-796 673 chr2R 23409788 23409817 chr2R 23409880 23409910 9 92 4.0 2.5 3.2 2.1 122 chr2R 23409788 intergenic not near genes chr2R 23409849 intergenic not near genes chr2R 23409910 intergenic not near genes chr2R_9_23405001 chr2R_23405001 RAL-796 674 chr2R 23423738 23423762 chr2R 23423896 23423920 16 157 3.0 2.0 2.5 4.6 182 chr2R 23423738 intron CG9815 - chr2R 23423829 intron CG9815 - chr2R 23423920 intron CG9815 - chr2R_16_23420001 chr2R_23420001 RAL-796 675 chr2R 23487461 23487479 chr2R 23487531 23487561 9 80 0.5 4.5 2.5 2.6 100 chr2R 23487461 intron CG43795 + chr2R 23487511 intron CG43795 + chr2R 23487561 intron CG43795 + chr2R_9_23485001 chr2R_23485001 RAL-796 676 chr2R 23521409 23521438 chr2R 23521504 23521533 8 96 2.5 6.5 4.5 1.5 124 chr2R 23521409 intron RabX1 - chr2R 23521471 intron RabX1 - chr2R 23521533 intron RabX1 - chr2R_8_23520001 chr2R_23520001 RAL-796 677 chr2R 23607035 23607188 chr2R 23607116 23607281 12 84 2.0 2.5 2.2 3.8 246 chr2R 23607035 intron CG17664 - chr2R 23607158 intron CG17664 - chr2R 23607281 intron CG17664 - chr2R_12_23605001 chr2R_23605001 RAL-796 678 chr2R 23653978 23654004 chr2R 23654055 23654081 11 77 3.5 5.0 4.2 2.1 103 chr2R 23653978 3` UTR retn + chr2R 23654030 3` UTR retn + chr2R 23654081 3` UTR retn + chr2R_11_23650001 chr2R_23650001 RAL-796 679 chr2R 23745404 23745434 chr2R 23745480 23745510 13 76 1.5 4.5 3.0 3.2 106 chr2R 23745404 intron egl - chr2R 23745457 intron egl - chr2R 23745510 intron egl - chr2R_13_23745001 chr2R_23745001 RAL-796 680 chr2R 23914303 23914332 chr2R 23921926 23921955 412 9 7623 3.0 3.0 3.0 2.2 7652 chr2R 23914303 exon kcc + chr2R 23918129 intron kcc + chr2R 23921955 intron kcc + chr2R_9_23915001 chr2R_23915001 RAL-796 681 chr2R 24025710 24025741 chr2R 24025812 24025843 10 102 1.5 3.5 2.5 2.9 133 chr2R 24025710 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025776 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025843 3` UTR Adk2 + chr2R_10_24025001 chr2R_24025001 RAL-796 682 chr2R 24147080 24147095 chr2R 24154650 24154673 412 6 7576 5.0 7.0 6.0 0.9 7593 chr2R 24147080 intron Dat + chr2R 24150876 intron Dat + chr2R 24154673 intron Dat + chr2R_6_24150001 chr2R_24150001 RAL-796 683 chr2R 24177237 24177267 chr2R 24184722 24184752 412 5 7485 3.0 2.0 2.5 1.4 7515 chr2R 24177237 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184752 3` UTR Nop60B + chr2R_5_24180001 chr2R_24180001 RAL-796 684 chr2R 24287134 24287151 chr2R 24287211 24287228 5 77 4.0 3.0 3.5 1.1 94 chr2R 24287134 intron nvy + chr2R 24287181 intron nvy + chr2R 24287228 intron nvy + chr2R_5_24285001 chr2R_24285001 RAL-796 685 chr2R 24351417 24351438 chr2R 24351497 24351519 11 81 2.0 2.5 2.2 3.4 102 chr2R 24351417 intron bs + chr2R 24351468 intron bs + chr2R 24351519 intron,3` UTR bs +,CR44811 - chr2R_11_24350001 chr2R_24350001 RAL-796 686 chr2R 24353426 24353458 chr2R 24361788 24361820 roo 9 8360 1.0 4.0 2.5 2.6 8394 chr2R 24353426 intron,intron bs +,CR44811 - chr2R 24357623 intron,intron bs +,CR44811 - chr2R 24361820 intron,intron bs +,CR44811 - chr2R_9_24355001 chr2R_24355001 RAL-796 687 chr2R 24383831 24383857 chr2R 24383912 24383938 7 81 2.0 3.0 2.5 2.0 107 chr2R 24383831 intron mAChR-A - chr2R 24383884 intron mAChR-A - chr2R 24383938 exon mAChR-A - chr2R_7_24380001 chr2R_24380001 RAL-796 688 chr2R 24542603 24542624 chr2R 24542699 24542720 6 95 2.5 2.0 2.2 1.9 117 chr2R 24542603 intron,intron CG4622 -,ITP + chr2R 24542662 intron,intron CG4622 -,ITP + chr2R 24542720 intron,intron CG4622 -,ITP + chr2R_6_24540001 chr2R_24540001 RAL-796 689 chr2R 24621042 24621068 chr2R 24621135 24621135 8 84 2.0 2.0 2.0 2.7 93 chr2R 24621042 exon CG13594 - chr2R 24621088 intron CG13594 - chr2R 24621135 intron CG13594 - chr2R_8_24620001 chr2R_24620001 RAL-796 690 chr2R 24629139 24629177 chr2R 24629241 24629279 8 102 4.0 2.0 3.0 2.0 140 chr2R 24629139 intron CG13594 - chr2R 24629209 intron CG13594 - chr2R 24629279 intron CG13594 - chr2R_8_24625001 chr2R_24625001 RAL-796 691 chr2R 24647587 24647618 chr2R 24655144 24655175 412 7 7556 4.5 1.5 3.0 1.8 7588 chr2R 24647587 intergenic not near genes chr2R 24651381 intergenic not near genes chr2R 24655175 intergenic not near genes chr2R_7_24650001 chr2R_24650001 RAL-796 692 chr2R 24687640 24687668 chr2R 24687723 24687746 19 83 3.5 4.0 3.8 4.0 106 chr2R 24687640 intergenic Mmp1 - chr2R 24687693 intergenic Mmp1 - chr2R 24687746 intergenic Mmp1 - chr2R_19_24685001 chr2R_24685001 RAL-796 693 chr2R 24719796 24719824 chr2R 24719907 24719930 9 107 3.5 3.0 3.2 2.1 134 chr2R 24719796 intron Mid1 - chr2R 24719863 intron Mid1 - chr2R 24719930 intron Mid1 - chr2R_9_24715001 chr2R_24715001 RAL-796 694 chr2R 24723954 24723979 chr2R 24724061 24724076 7 110 3.5 3.5 3.5 1.6 122 chr2R 24723954 intron Mid1 - chr2R 24724015 intron Mid1 - chr2R 24724076 intron Mid1 - chr2R_7_24720001 chr2R_24720001 RAL-796 695 chr2R 24727888 24727918 chr2R 24735396 24735426 mdg1 6 7505 1.5 3.5 2.5 1.7 7538 chr2R 24727888 intron Mid1 - chr2R 24731657 intron Mid1 - chr2R 24735426 intron Mid1 - chr2R_6_24730001 chr2R_24730001 RAL-796 696 chr2R 24763608 24763644 chr2R 24765584 24765620 G2 17 1974 3.5 2.5 3.0 4.2 2012 chr2R 24763608 exon CG3894 + chr2R 24764614 intron CG3894 + chr2R 24765620 exon CG3894 + chr2R_17_24760001 chr2R_24760001 RAL-796 697 chr2R 25034662 25034686 chr2R 25034757 25034781 6 94 2.5 1.5 2.0 2.0 119 chr2R 25034662 intron Nplp1 + chr2R 25034722 intron Nplp1 + chr2R 25034781 intron Nplp1 + chr2R_6_25030001 chr2R_25030001 RAL-796 698 chr2R 25101274 25101308 chr2R 25101376 25101410 9 101 1.5 5.0 3.2 2.1 136 chr2R 25101274 intron lov - chr2R 25101342 intron lov - chr2R 25101410 intron lov - chr2R_9_25100001 chr2R_25100001 RAL-796 699 chr2R 25104775 25104809 chr2R 25104900 25104934 10 125 1.5 3.5 2.5 2.9 159 chr2R 25104775 intron lov - chr2R 25104854 intron lov - chr2R 25104934 intron lov - chr2R_10_25100001 chr2R_25100001 RAL-796 700 chr2R 25122961 25122992 chr2R 25123040 25123071 8 79 0.5 1.0 0.8 4.4 110 chr2R 25122961 intron lov - chr2R 25123016 intron lov - chr2R 25123071 intron lov - chr2R_8_25120001 chr2R_25120001 RAL-796 701 chr2R 25141653 25141681 chr2R 25159342 25159371 roo 5 17690 4.0 2.0 3.0 1.2 17718 chr2R 25141653 intergenic not near genes chr2R 25150512 intergenic not near genes chr2R 25159371 intergenic not near genes chr2R_5_25150001 chr2R_25150001 RAL-796 702 chr2R 25180763 25180786 chr2R 25180840 25180863 4 77 1.0 0.0 0.5 2.7 100 chr2R 25180763 intergenic not near genes chr2R 25180813 intergenic not near genes chr2R 25180863 intergenic not near genes chr2R_4_25180001 chr2R_25180001 RAL-796 703 chr2R 25253447 25253476 chr2R 25253523 25253552 9 76 1.5 3.0 2.2 2.8 105 chr2R 25253447 intron,intron CG9380 -,CG30428 + chr2R 25253500 intron,intron CG9380 -,CG30428 + chr2R 25253552 intron,intron CG9380 -,CG30428 + chr2R_9_25250001 chr2R_25250001 RAL-796 704 chr3L 68991 69012 chr3L 69072 69098 8 86 2.0 4.0 3.0 2.0 107 chr3L 68991 3` UTR Lsp1gamma + chr3L 69044 intergenic Lsp1gamma +,CR44510 + chr3L 69098 intergenic CR44510 +,Lsp1gamma + chr3L_8_65001 chr3L_65001 RAL-796 705 chr3L 71931 71961 chr3L 72014 72044 11 83 4.5 5.0 4.8 1.9 113 chr3L 71931 intergenic CR43988 - chr3L 71988 intergenic CR43988 - chr3L 72044 intergenic CR43988 - chr3L_11_70001 chr3L_70001 RAL-796 706 chr3L 99409 99441 chr3L 99524 99556 5 114 1.0 0.5 0.8 2.8 147 chr3L 99409 intergenic not near genes chr3L 99482 intergenic not near genes chr3L 99556 intergenic not near genes chr3L_5_95001 chr3L_95001 RAL-796 707 chr3L 110210 110238 chr3L 119377 119405 roo 9 9167 2.5 3.5 3.0 2.2 9195 chr3L 110210 intergenic not near genes chr3L 114808 intergenic not near genes chr3L 119405 intergenic not near genes chr3L_9_110001 chr3L_110001 RAL-796 708 chr3L 226858 226893 chr3L 226951 226986 7 93 2.5 2.5 2.5 2.0 128 chr3L 226858 5` UTR CR42862 + chr3L 226922 5` UTR CR42862 + chr3L 226986 5` UTR CR42862 + chr3L_7_225001 chr3L_225001 RAL-796 709 chr3L 390955 390986 chr3L 391061 391082 11 105 1.5 3.5 2.5 3.1 127 chr3L 390955 intron trh - chr3L 391018 intron trh - chr3L 391082 intron trh - chr3L_11_390001 chr3L_390001 RAL-796 710 chr3L 402689 402717 chr3L 409741 409770 297 9 7051 1.0 7.0 4.0 1.8 7081 chr3L 402689 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409770 intergenic not near genes chr3L_9_405001 chr3L_405001 RAL-796 711 chr3L 494594 494623 chr3L 494676 494705 7 82 3.0 0.0 1.5 2.8 111 chr3L 494594 intron klar - chr3L 494650 intron klar - chr3L 494705 intron klar - chr3L_7_490001 chr3L_490001 RAL-796 712 chr3L 534786 534804 chr3L 535041 535060 8 255 2.5 3.5 3.0 2.0 274 chr3L 534786 intron klar - chr3L 534923 intron klar - chr3L 535060 intron klar - chr3L_8_530001 chr3L_530001 RAL-796 713 chr3L 611346 611379 chr3L 611429 611462 13 83 1.5 1.0 1.2 5.9 116 chr3L 611346 intergenic not near genes chr3L 611404 intergenic not near genes chr3L 611462 intergenic not near genes chr3L_13_610001 chr3L_610001 RAL-796 714 chr3L 642473 642502 chr3L 642564 642593 9 89 2.5 2.0 2.2 2.8 120 chr3L 642473 5` UTR CR43334 + chr3L 642533 5` UTR CR43334 + chr3L 642593 5` UTR CR43334 + chr3L_9_640001 chr3L_640001 RAL-796 715 chr3L 651387 651418 chr3L 651475 651506 10 88 3.5 2.5 3.0 2.5 119 chr3L 651387 intergenic Gale +,CG3402 - chr3L 651446 intergenic CG3402 -,Gale + chr3L 651506 intergenic CG3402 -,Gale + chr3L_10_650001 chr3L_650001 RAL-796 716 chr3L 659431 659440 chr3L 659507 659517 5 76 0.0 3.0 1.5 2.0 86 chr3L 659431 intergenic not near genes chr3L 659474 intergenic not near genes chr3L 659517 intergenic not near genes chr3L_5_655001 chr3L_655001 RAL-796 717 chr3L 704273 704299 chr3L 704410 704436 8 137 1.0 2.5 1.8 2.9 163 chr3L 704273 intergenic not near genes chr3L 704354 intergenic not near genes chr3L 704436 intergenic not near genes chr3L_8_700001 chr3L_700001 RAL-796 718 chr3L 705898 705932 chr3L 705994 706028 5 96 1.0 2.0 1.5 2.0 130 chr3L 705898 intergenic CG13895 -,CR44514 + chr3L 705963 3` UTR CG13895 - chr3L 706028 3` UTR CG13895 - chr3L_5_705001 chr3L_705001 RAL-796 719 chr3L 732752 732779 chr3L 733171 733199 5 416 0.0 0.5 0.2 4.2 447 chr3L 732752 intergenic not near genes chr3L 732976 intergenic not near genes chr3L 733199 intergenic not near genes chr3L_5_730001 chr3L_730001 RAL-796 720 chr3L 785335 785343 chr3L 785490 785515 4 168 2.5 4.5 3.5 0.9 180 chr3L 785335 intergenic not near genes chr3L 785425 intergenic not near genes chr3L 785515 intergenic not near genes chr3L_4_785001 chr3L_785001 RAL-796 721 chr3L 789915 789943 chr3L 790400 790427 roo 6 485 2.0 4.0 3.0 1.5 512 chr3L 789915 intergenic not near genes chr3L 790171 intergenic not near genes chr3L 790427 intergenic not near genes chr3L_6_790001 chr3L_790001 RAL-796 722 chr3L 858000 858013 chr3L 866480 866488 Tirant 5 8479 5.5 3.5 4.5 0.9 8488 chr3L 858000 intergenic not near genes chr3L 862244 intergenic not near genes chr3L 866488 intergenic CG12502 + chr3L_5_860001 chr3L_860001 RAL-796 723 chr3L 925176 925208 chr3L 932602 932634 mdg1 20 7426 2.0 3.0 2.5 5.7 7458 chr3L 925176 intron Glut1 + chr3L 928905 intron Glut1 + chr3L 932634 intron Glut1 + chr3L_20_925001 chr3L_925001 RAL-796 724 chr3L 933916 933942 chr3L 934019 934045 12 103 2.0 1.0 1.5 4.8 129 chr3L 933916 intron Glut1 + chr3L 933980 intron Glut1 + chr3L 934045 intron Glut1 + chr3L_12_930001 chr3L_930001 RAL-796 725 chr3L 947737 947754 chr3L 947822 947839 5 85 0.5 0.5 0.5 3.3 102 chr3L 947737 intron Glut1 + chr3L 947788 intron Glut1 + chr3L 947839 intron Glut1 + chr3L_5_945001 chr3L_945001 RAL-796 726 chr3L 1003053 1003081 chr3L 1003130 1003158 7 77 2.0 3.0 2.5 2.0 105 chr3L 1003053 intron trio - chr3L 1003106 intron trio - chr3L 1003158 intron trio - chr3L_7_1000001 chr3L_1000001 RAL-796 727 chr3L 1015036 1015055 chr3L 1015148 1015167 4 112 4.0 4.5 4.2 0.8 131 chr3L 1015036 intron trio - chr3L 1015102 intron trio - chr3L 1015167 intron trio - chr3L_4_1015001 chr3L_1015001 RAL-796 728 chr3L 1040551 1040575 chr3L 1040635 1040659 7 84 2.5 2.5 2.5 2.0 108 chr3L 1040551 intron bab1 - chr3L 1040605 intron bab1 - chr3L 1040659 intron bab1 - chr3L_7_1040001 chr3L_1040001 RAL-796 729 chr3L 1047354 1047381 chr3L 1055166 1055168 412 4 7806 4.5 1.0 2.8 1.1 7814 chr3L 1047354 intron bab1 - chr3L 1051261 intron bab1 - chr3L 1055168 intron bab1 - chr3L_4_1050001 chr3L_1050001 RAL-796 730 chr3L 1063336 1063370 chr3L 1063712 1063746 9 371 4.5 2.0 3.2 2.1 410 chr3L 1063336 intron bab1 - chr3L 1063541 intron bab1 - chr3L 1063746 intron bab1 - chr3L_9_1060001 chr3L_1060001 RAL-796 731 chr3L 1154131 1154163 chr3L 1163281 1163313 roo 10 9150 1.5 3.0 2.2 3.1 9182 chr3L 1154131 intron bab2 - chr3L 1158722 intron bab2 - chr3L 1163313 intron bab2 - chr3L_10_1155001 chr3L_1155001 RAL-796 732 chr3L 1189625 1189657 chr3L 1189711 1189743 17 84 1.5 1.5 1.5 6.8 118 chr3L 1189625 5` UTR CG13912 + chr3L 1189684 5` UTR CG13912 + chr3L 1189743 5` UTR CG13912 + chr3L_17_1185001 chr3L_1185001 RAL-796 733 chr3L 1219596 1219621 chr3L 1227329 1227354 412 8 7732 3.0 3.0 3.0 2.0 7758 chr3L 1219596 intron mwh + chr3L 1223475 intron mwh + chr3L 1227354 intron mwh + chr3L_8_1220001 chr3L_1220001 RAL-796 734 chr3L 1260143 1260164 chr3L 1260223 1260244 9 80 2.0 3.0 2.5 2.6 101 chr3L 1260143 intron CG9134 + chr3L 1260194 intron CG9134 + chr3L 1260244 intron CG9134 + chr3L_9_1260001 chr3L_1260001 RAL-796 735 chr3L 1268153 1268181 chr3L 1268340 1268368 12 186 4.0 0.0 2.0 4.0 215 chr3L 1268153 intron CG9134 + chr3L 1268260 intron CG9134 + chr3L 1268368 intron CG9134 + chr3L_12_1265001 chr3L_1265001 RAL-796 736 chr3L 1347167 1347173 chr3L 1347252 1347258 5 85 6.5 7.5 7.0 0.6 91 chr3L 1347167 intron Ptp61F - chr3L 1347212 intron Ptp61F - chr3L 1347258 intron Ptp61F - chr3L_5_1345001 chr3L_1345001 RAL-796 737 chr3L 1347175 1347189 chr3L 1347245 1347274 6 81 2.0 6.0 4.0 1.2 99 chr3L 1347175 intron Ptp61F - chr3L 1347224 intron Ptp61F - chr3L 1347274 intron Ptp61F - chr3L_6_1345001 chr3L_1345001 RAL-796 738 chr3L 1358754 1358793 chr3L 1359135 1359173 15 380 3.5 2.0 2.8 3.9 419 chr3L 1358754 intron Ptp61F - chr3L 1358964 intron Ptp61F - chr3L 1359173 intron Ptp61F - chr3L_15_1355001 chr3L_1355001 RAL-796 739 chr3L 1505997 1506027 chr3L 1513592 1513624 17.6 7 7597 5.0 4.5 4.8 1.2 7627 chr3L 1505997 intron,intron Psa +,cue - chr3L 1509810 intron,intron Psa +,cue - chr3L 1513624 intron,intron Psa +,cue - chr3L_7_1505001 chr3L_1505001 RAL-796 740 chr3L 1584112 1584125 chr3L 1584194 1584207 5 82 0.0 2.0 1.0 2.5 95 chr3L 1584112 intron CG13917 + chr3L 1584160 intron CG13917 + chr3L 1584207 intron CG13917 + chr3L_5_1580001 chr3L_1580001 RAL-796 741 chr3L 1688251 1688259 chr3L 1688380 1688388 4 129 2.5 0.0 1.2 1.8 137 chr3L 1688251 intron CG7991 + chr3L 1688320 intron CG7991 + chr3L 1688388 intron CG7991 + chr3L_4_1685001 chr3L_1685001 RAL-796 742 chr3L 1740859 1740882 chr3L 1741104 1741126 pogo 5 245 5.0 2.5 3.8 1.0 267 chr3L 1740859 intron Gk + chr3L 1740992 intron Gk + chr3L 1741126 intron Gk + chr3L_5_1740001 chr3L_1740001 RAL-796 743 chr3L 1922461 1922472 chr3L 1922529 1922545 4 70 6.5 9.0 7.8 0.5 84 chr3L 1922461 intron Dbx + chr3L 1922503 intron Dbx + chr3L 1922545 intron Dbx + chr3L_4_1920001 chr3L_1920001 RAL-796 744 chr3L 1991122 1991153 chr3L 1991200 1991231 7 78 1.0 2.0 1.5 2.8 109 chr3L 1991122 intergenic not near genes chr3L 1991176 intergenic not near genes chr3L 1991231 intergenic not near genes chr3L_7_1990001 chr3L_1990001 RAL-796 745 chr3L 2168774 2168806 chr3L 2168862 2168897 13 91 4.0 3.0 3.5 2.9 123 chr3L 2168774 exon CG15879 - chr3L 2168836 intron CG15879 - chr3L 2168897 intron CG15879 - chr3L_13_2165001 chr3L_2165001 RAL-796 746 chr3L 2308009 2308035 chr3L 2308115 2308141 7 105 1.5 4.0 2.8 1.8 132 chr3L 2308009 intergenic not near genes chr3L 2308075 intergenic not near genes chr3L 2308141 intergenic not near genes chr3L_7_2305001 chr3L_2305001 RAL-796 747 chr3L 2332980 2333009 chr3L 2333250 2333279 13 270 1.5 2.5 2.0 4.3 299 chr3L 2332980 intron MsR1 + chr3L 2333130 intron MsR1 + chr3L 2333279 intron MsR1 + chr3L_13_2330001 chr3L_2330001 RAL-796 748 chr3L 2446758 2446767 chr3L 2446840 2446868 4 88 4.0 2.5 3.2 1.0 110 chr3L 2446758 intron CG45186 + chr3L 2446813 intron CG45186 + chr3L 2446868 intron CG45186 + chr3L_4_2445001 chr3L_2445001 RAL-796 749 chr3L 2447503 2447519 chr3L 2456659 2456675 roo 5 9156 9.0 3.5 6.2 0.7 9172 chr3L 2447503 intron CG45186 + chr3L 2452089 intron CG45186 + chr3L 2456675 intron CG45186 + chr3L_5_2450001 chr3L_2450001 RAL-796 750 chr3L 2515397 2515409 chr3L 2515479 2515491 5 82 3.0 1.5 2.2 1.6 94 chr3L 2515397 intron Spn - chr3L 2515444 intron Spn - chr3L 2515491 intron Spn - chr3L_5_2515001 chr3L_2515001 RAL-796 751 chr3L 2533651 2533680 chr3L 2533733 2533742 11 79 5.0 4.0 4.5 2.0 91 chr3L 2533651 intron Spn - chr3L 2533696 intron Spn - chr3L 2533742 intron Spn - chr3L_11_2530001 chr3L_2530001 RAL-796 752 chr3L 2683943 2683979 chr3L 2684019 2684055 11 76 2.5 0.5 1.5 4.4 112 chr3L 2683943 intron Fife - chr3L 2683999 intron Fife - chr3L 2684055 intron Fife - chr3L_11_2680001 chr3L_2680001 RAL-796 753 chr3L 2716195 2716210 chr3L 2716274 2716289 5 78 4.5 0.0 2.2 1.6 94 chr3L 2716195 intergenic not near genes chr3L 2716242 intergenic not near genes chr3L 2716289 intergenic not near genes chr3L_5_2715001 chr3L_2715001 RAL-796 754 chr3L 2719541 2719559 chr3L 2719643 2719661 5 102 1.0 2.5 1.8 1.8 120 chr3L 2719541 3` UTR Mrtf - chr3L 2719601 3` UTR Mrtf - chr3L 2719661 3` UTR Mrtf - chr3L_5_2715001 chr3L_2715001 RAL-796 755 chr3L 2795725 2795746 chr3L 2795848 2795869 9 123 1.5 3.5 2.5 2.6 144 chr3L 2795725 intron CG43444 - chr3L 2795797 intron CG43444 - chr3L 2795869 intron CG43444 - chr3L_9_2795001 chr3L_2795001 RAL-796 756 chr3L 2899577 2899601 chr3L 2899690 2899713 9 113 4.5 3.0 3.8 1.9 136 chr3L 2899577 intron Shab + chr3L 2899645 intron Shab + chr3L 2899713 intron Shab + chr3L_9_2895001 chr3L_2895001 RAL-796 757 chr3L 2901374 2901400 chr3L 2901537 2901550 7 155 1.0 2.0 1.5 2.8 176 chr3L 2901374 intron Shab + chr3L 2901462 intron Shab + chr3L 2901550 intron Shab + chr3L_7_2900001 chr3L_2900001 RAL-796 758 chr3L 2927852 2927861 chr3L 2936129 2936138 Tirant 5 8277 3.5 0.5 2.0 1.7 8286 chr3L 2927852 intron Shab + chr3L 2931995 intron Shab + chr3L 2936138 intron Shab + chr3L_5_2930001 chr3L_2930001 RAL-796 759 chr3L 3028341 3028366 chr3L 3028420 3028445 10 79 3.0 4.0 3.5 2.2 104 chr3L 3028341 intergenic not near genes chr3L 3028393 intergenic not near genes chr3L 3028445 intergenic not near genes chr3L_10_3025001 chr3L_3025001 RAL-796 760 chr3L 3061293 3061311 chr3L 3069866 3069894 Tirant 4 8580 2.5 2.0 2.2 1.2 8601 chr3L 3061293 intron CG32486 - chr3L 3065594 intron CG32486 - chr3L 3069894 intron CG32486 - chr3L_4_3065001 chr3L_3065001 RAL-796 761 chr3L 3178729 3178742 chr3L 3178812 3178825 6 83 5.5 0.0 2.8 1.6 96 chr3L 3178729 intergenic CG14964 -,Girdin + chr3L 3178777 intergenic Girdin +,CG14964 - chr3L 3178825 intergenic Girdin +,CG14964 - chr3L_6_3175001 chr3L_3175001 RAL-796 762 chr3L 3259816 3259833 chr3L 3259916 3259933 6 100 1.5 2.5 2.0 2.0 117 chr3L 3259816 intron ckd + chr3L 3259874 intron ckd + chr3L 3259933 intron ckd + chr3L_6_3255001 chr3L_3255001 RAL-796 763 chr3L 3281459 3281467 chr3L 3281954 3281963 Doc 7 496 0.5 6.0 3.2 1.7 504 chr3L 3281459 intron CG12017 + chr3L 3281711 intron CG12017 + chr3L 3281963 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-796 764 chr3L 3314136 3314171 chr3L 3314270 3314303 25 132 7.0 9.5 8.2 2.7 167 chr3L 3314136 intergenic ZnT63C +,Drsl2 + chr3L 3314220 intergenic Drsl2 +,ZnT63C + chr3L 3314303 intergenic Drsl2 +,ZnT63C + chr3L_25_3310001 chr3L_3310001 RAL-796 765 chr3L 3312268 3312296 chr3L 3315550 3315578 8 3282 24.5 22.0 23.2 0.3 3310 chr3L 3312268 exon ZnT63C + chr3L 3313923 3` UTR ZnT63C + chr3L 3315578 intergenic Drsl4 +,Drsl3 + chr3L_8_3310001 chr3L_3310001 RAL-796 766 chr3L 3315976 3316011 chr3L 3316077 3316112 7 101 0.5 1.5 1.0 3.5 136 chr3L 3315976 intergenic Drsl4 + chr3L 3316044 intergenic Drsl4 + chr3L 3316112 intergenic Drsl4 + chr3L_7_3315001 chr3L_3315001 RAL-796 767 chr3L 3436288 3436311 chr3L 3436367 3436390 8 79 3.0 2.5 2.8 2.1 102 chr3L 3436288 intron eIF5B - chr3L 3436339 intron eIF5B - chr3L 3436390 intron eIF5B - chr3L_8_3435001 chr3L_3435001 RAL-796 768 chr3L 3475075 3475111 chr3L 3475518 3475555 jockey 8 444 0.5 3.0 1.8 2.9 480 chr3L 3475075 intron CG42324 + chr3L 3475315 intron CG42324 + chr3L 3475555 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-796 769 chr3L 3483551 3483570 chr3L 3483757 3483777 4 207 2.0 2.0 2.0 1.3 226 chr3L 3483551 intron CG42324 + chr3L 3483664 intron CG42324 + chr3L 3483777 intron CG42324 + chr3L_4_3480001 chr3L_3480001 RAL-796 770 chr3L 3484285 3484316 chr3L 3484377 3484408 11 92 3.5 4.5 4.0 2.2 123 chr3L 3484285 intron,exon CG42324 +,CG43074 - chr3L 3484346 intron,exon CG42324 +,CG43074 - chr3L 3484408 intron,intron CG42324 +,CG43074 - chr3L_11_3480001 chr3L_3480001 RAL-796 771 chr3L 3577735 3577759 chr3L 3577813 3577837 10 77 2.5 2.5 2.5 2.9 102 chr3L 3577735 intron Eip63E + chr3L 3577786 intron Eip63E + chr3L 3577837 intron Eip63E + chr3L_10_3575001 chr3L_3575001 RAL-796 772 chr3L 3601205 3601236 chr3L 3601285 3601318 11 83 1.5 0.0 0.8 6.1 113 chr3L 3601205 intron Eip63E + chr3L 3601262 intron Eip63E + chr3L 3601318 intron Eip63E + chr3L_11_3600001 chr3L_3600001 RAL-796 773 chr3L 3601297 3601324 chr3L 3606608 3606635 copia 20 5310 0.0 2.5 1.2 9.1 5338 chr3L 3601297 intron Eip63E + chr3L 3603966 intron Eip63E + chr3L 3606635 intron Eip63E + chr3L_20_3600001 chr3L_3600001 RAL-796 774 chr3L 3845570 3845578 chr3L 3845664 3845667 8 93 6.5 0.5 3.5 1.8 97 chr3L 3845570 intergenic not near genes chr3L 3845618 intergenic not near genes chr3L 3845667 intergenic not near genes chr3L_8_3845001 chr3L_3845001 RAL-796 775 chr3L 3890979 3890991 chr3L 3891060 3891072 4 81 2.5 0.0 1.2 1.8 93 chr3L 3890979 intergenic not near genes chr3L 3891026 intergenic not near genes chr3L 3891072 intergenic not near genes chr3L_4_3890001 chr3L_3890001 RAL-796 776 chr3L 3912480 3912514 chr3L 3912556 3912590 8 76 1.5 0.5 1.0 4.0 110 chr3L 3912480 intron Eip63F-1 - chr3L 3912535 intron Eip63F-1 - chr3L 3912590 intron Eip63F-1 - chr3L_8_3910001 chr3L_3910001 RAL-796 777 chr3L 3946197 3946215 chr3L 3946274 3946290 7 76 1.0 2.0 1.5 2.8 93 chr3L 3946197 3` UTR CG14982 + chr3L 3946244 3` UTR CG14982 + chr3L 3946290 3` UTR CG14982 + chr3L_7_3945001 chr3L_3945001 RAL-796 778 chr3L 4015733 4015765 chr3L 4015816 4015848 13 82 2.0 2.0 2.0 4.3 115 chr3L 4015733 intergenic not near genes chr3L 4015790 intergenic not near genes chr3L 4015848 intergenic not near genes chr3L_13_4015001 chr3L_4015001 RAL-796 779 chr3L 4054661 4054666 chr3L 4054761 4054765 5 100 0.5 0.0 0.2 4.2 104 chr3L 4054661 intron CG1136 + chr3L 4054713 intron CG1136 + chr3L 4054765 intron CG1136 + chr3L_5_4050001 chr3L_4050001 RAL-796 780 chr3L 4328737 4328757 chr3L 4336235 4336255 412 5 7498 5.0 4.5 4.8 0.9 7518 chr3L 4328737 intron Cip4 - chr3L 4332496 intron Cip4 - chr3L 4336255 intron Cip4 - chr3L_5_4330001 chr3L_4330001 RAL-796 781 chr3L 4342414 4342436 chr3L 4342491 4342515 6 75 3.0 1.5 2.2 1.9 101 chr3L 4342414 intron Cip4 - chr3L 4342464 intron Cip4 - chr3L 4342515 intron Cip4 - chr3L_6_4340001 chr3L_4340001 RAL-796 782 chr3L 4347830 4347856 chr3L 4347916 4347942 9 86 3.5 2.5 3.0 2.2 112 chr3L 4347830 intron Cip4 - chr3L 4347886 intron Cip4 - chr3L 4347942 intron Cip4 - chr3L_9_4345001 chr3L_4345001 RAL-796 783 chr3L 4580320 4580337 chr3L 4580390 4580423 7 83 2.0 1.5 1.8 2.5 103 chr3L 4580320 intron CG42540 + chr3L 4580372 intron CG42540 + chr3L 4580423 intron CG42540 + chr3L_7_4580001 chr3L_4580001 RAL-796 784 chr3L 4699297 4699303 chr3L 4699377 4699378 4 78 1.0 1.0 1.0 2.0 81 chr3L 4699297 intron RhoGEF64C + chr3L 4699338 intron RhoGEF64C + chr3L 4699378 intron RhoGEF64C + chr3L_4_4695001 chr3L_4695001 RAL-796 785 chr3L 4748708 4748720 chr3L 4748799 4748811 4 91 4.0 2.5 3.2 1.0 103 chr3L 4748708 intron RhoGEF64C + chr3L 4748760 intron RhoGEF64C + chr3L 4748811 intron RhoGEF64C + chr3L_4_4745001 chr3L_4745001 RAL-796 786 chr3L 4754759 4754768 chr3L 4754835 4754844 5 76 2.0 1.5 1.8 1.8 85 chr3L 4754759 intron RhoGEF64C + chr3L 4754802 intron RhoGEF64C + chr3L 4754844 intron RhoGEF64C + chr3L_5_4750001 chr3L_4750001 RAL-796 787 chr3L 4858313 4858328 chr3L 4858403 4858413 6 89 4.0 7.0 5.5 0.9 100 chr3L 4858313 intergenic not near genes chr3L 4858363 intergenic not near genes chr3L 4858413 intergenic not near genes chr3L_6_4855001 chr3L_4855001 RAL-796 788 chr3L 4901130 4901147 chr3L 4907320 4907336 diver 4 6190 1.5 1.0 1.2 1.8 6206 chr3L 4901130 intergenic CG13704 + chr3L 4904233 intergenic not near genes chr3L 4907336 intergenic not near genes chr3L_4_4900001 chr3L_4900001 RAL-796 789 chr3L 4907980 4907988 chr3L 4908056 4908064 4 76 0.5 2.5 1.5 1.6 84 chr3L 4907980 intergenic not near genes chr3L 4908022 intergenic not near genes chr3L 4908064 intergenic not near genes chr3L_4_4905001 chr3L_4905001 RAL-796 790 chr3L 5164642 5164669 chr3L 5164718 5164745 4 76 1.5 0.5 1.0 2.0 103 chr3L 5164642 intron shep - chr3L 5164694 intron shep - chr3L 5164745 intron shep - chr3L_4_5160001 chr3L_5160001 RAL-796 791 chr3L 5297574 5297601 chr3L 5297691 5297717 12 115 3.5 5.0 4.2 2.3 143 chr3L 5297574 intergenic not near genes chr3L 5297646 intergenic not near genes chr3L 5297717 intergenic not near genes chr3L_12_5295001 chr3L_5295001 RAL-796 792 chr3L 5306677 5306683 chr3L 5306767 5306773 5 90 0.5 1.5 1.0 2.5 96 chr3L 5306677 intergenic not near genes chr3L 5306725 intergenic not near genes chr3L 5306773 intergenic not near genes chr3L_5_5305001 chr3L_5305001 RAL-796 793 chr3L 5498421 5498432 chr3L 5498498 5498509 5 77 1.0 8.5 4.8 0.9 88 chr3L 5498421 exon blanks - chr3L 5498465 exon blanks - chr3L 5498509 exon blanks - chr3L_5_5495001 chr3L_5495001 RAL-796 794 chr3L 5701829 5701848 chr3L 5701957 5701982 7 132 2.0 0.0 1.0 3.5 153 chr3L 5701829 intron sif + chr3L 5701906 intron sif + chr3L 5701982 intron sif + chr3L_7_5700001 chr3L_5700001 RAL-796 795 chr3L 5902567 5902581 chr3L 5902652 5902666 6 84 4.0 3.5 3.8 1.2 99 chr3L 5902567 intergenic QC -,CG32413 - chr3L 5902616 intergenic QC -,CG32413 - chr3L 5902666 intergenic QC -,CG32413 - chr3L_6_5900001 chr3L_5900001 RAL-796 796 chr3L 5908078 5908098 chr3L 5908158 5908178 5 79 2.0 0.5 1.2 2.3 100 chr3L 5908078 intron CG13288 + chr3L 5908128 intron CG13288 + chr3L 5908178 intron CG13288 + chr3L_5_5905001 chr3L_5905001 RAL-796 797 chr3L 5926331 5926348 chr3L 5926503 5926538 BS 8 182 2.0 2.0 2.0 2.7 207 chr3L 5926331 intron Vap-33B + chr3L 5926434 intron Vap-33B + chr3L 5926538 intron Vap-33B + chr3L_8_5925001 chr3L_5925001 RAL-796 798 chr3L 6001683 6001716 chr3L 6004383 6004415 jockey 7 2700 3.0 0.5 1.8 2.5 2732 chr3L 6001683 intron PVRAP + chr3L 6003049 intron PVRAP + chr3L 6004415 intron PVRAP + chr3L_7_6000001 chr3L_6000001 RAL-796 799 chr3L 6116702 6116721 chr3L 6116786 6116805 6 84 2.0 3.0 2.5 1.7 103 chr3L 6116702 intron Ets65A + chr3L 6116754 intron Ets65A + chr3L 6116805 intron Ets65A + chr3L_6_6115001 chr3L_6115001 RAL-796 800 chr3L 6159868 6159897 chr3L 6159958 6159974 5 87 1.0 2.5 1.8 1.8 106 chr3L 6159868 intergenic not near genes chr3L 6159921 intergenic not near genes chr3L 6159974 intergenic not near genes chr3L_5_6155001 chr3L_6155001 RAL-796 801 chr3L 6220915 6220945 chr3L 6230067 6230096 roo 18 9152 3.0 8.0 5.5 2.8 9181 chr3L 6220915 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230096 intergenic not near genes chr3L_18_6225001 chr3L_6225001 RAL-796 802 chr3L 6259252 6259284 chr3L 6261297 6261329 11 2045 24.0 20.0 22.0 0.5 2077 chr3L 6259252 3` UTR ImpL3 - chr3L 6260290 exon ImpL3 - chr3L 6261329 intron ImpL3 - chr3L_11_6260001 chr3L_6260001 RAL-796 803 chr3L 6293771 6293791 chr3L 6293853 6293873 6 82 2.0 4.0 3.0 1.5 102 chr3L 6293771 intergenic not near genes chr3L 6293822 intergenic not near genes chr3L 6293873 intergenic not near genes chr3L_6_6290001 chr3L_6290001 RAL-796 804 chr3L 6335011 6335032 chr3L 6335482 6335503 297 4 471 3.0 2.0 2.5 1.1 492 chr3L 6335011 intron CG13300 - chr3L 6335257 intron CG13300 - chr3L 6335503 intron CG13300 - chr3L_4_6335001 chr3L_6335001 RAL-796 805 chr3L 6353400 6353408 chr3L 6353472 6353480 5 76 2.5 4.0 3.2 1.2 80 chr3L 6353400 intergenic not near genes chr3L 6353440 intergenic not near genes chr3L 6353480 intergenic not near genes chr3L_5_6350001 chr3L_6350001 RAL-796 806 chr3L 6561220 6561250 chr3L 6561425 6561453 9 205 4.5 2.5 3.5 2.0 233 chr3L 6561220 intron CG18769 + chr3L 6561336 intron CG18769 + chr3L 6561453 intron CG18769 + chr3L_9_6560001 chr3L_6560001 RAL-796 807 chr3L 6562838 6562869 chr3L 6562918 6562949 5 80 1.5 2.5 2.0 1.7 111 chr3L 6562838 intron CG18769 + chr3L 6562894 intron CG18769 + chr3L 6562949 intron CG18769 + chr3L_5_6560001 chr3L_6560001 RAL-796 808 chr3L 6686417 6686440 chr3L 6686562 6686586 7 146 2.5 4.0 3.2 1.7 169 chr3L 6686417 intergenic not near genes chr3L 6686502 intergenic not near genes chr3L 6686586 intergenic not near genes chr3L_7_6685001 chr3L_6685001 RAL-796 809 chr3L 6806732 6806739 chr3L 6806861 6806868 6 129 0.0 7.5 3.8 1.2 136 chr3L 6806732 intergenic not near genes chr3L 6806800 intergenic not near genes chr3L 6806868 intergenic not near genes chr3L_6_6805001 chr3L_6805001 RAL-796 810 chr3L 6887289 6887304 chr3L 6895248 6895263 roo 6 7959 3.0 1.5 2.2 1.9 7974 chr3L 6887289 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895263 intergenic not near genes chr3L_6_6890001 chr3L_6890001 RAL-796 811 chr3L 6922008 6922040 chr3L 6922094 6922128 8 87 3.0 5.0 4.0 1.6 120 chr3L 6922008 intergenic not near genes chr3L 6922068 intergenic not near genes chr3L 6922128 intergenic not near genes chr3L_8_6920001 chr3L_6920001 RAL-796 812 chr3L 6974506 6974524 chr3L 6974605 6974625 10 101 0.0 2.0 1.0 5.0 119 chr3L 6974506 intron Galphai - chr3L 6974566 intron Galphai - chr3L 6974625 intron Galphai - chr3L_10_6970001 chr3L_6970001 RAL-796 813 chr3L 7023404 7023418 chr3L 7023498 7023511 7 93 3.0 2.0 2.5 2.0 107 chr3L 7023404 intron Mp + chr3L 7023458 intron Mp + chr3L 7023511 intron Mp + chr3L_7_7020001 chr3L_7020001 RAL-796 814 chr3L 7079609 7079625 chr3L 7079686 7079701 6 77 4.5 2.5 3.5 1.3 92 chr3L 7079609 intergenic not near genes chr3L 7079655 intergenic not near genes chr3L 7079701 intergenic not near genes chr3L_6_7075001 chr3L_7075001 RAL-796 815 chr3L 7153324 7153347 chr3L 7153400 7153400 4 70 4.0 3.0 3.5 0.9 76 chr3L 7153324 intron corn - chr3L 7153362 intron corn - chr3L 7153400 intron corn - chr3L_4_7150001 chr3L_7150001 RAL-796 816 chr3L 7244930 7244957 chr3L 7245022 7245049 10 92 3.5 1.5 2.5 2.9 119 chr3L 7244930 exon mei-P22 + chr3L 7244990 exon mei-P22 + chr3L 7245049 exon mei-P22 + chr3L_10_7240001 chr3L_7240001 RAL-796 817 chr3L 7257893 7257915 chr3L 7258127 7258159 8 241 1.5 4.0 2.8 2.1 266 chr3L 7257893 intron CG14830 - chr3L 7258026 intron CG14830 - chr3L 7258159 intron CG14830 - chr3L_8_7255001 chr3L_7255001 RAL-796 818 chr3L 7263327 7263359 chr3L 7263416 7263445 11 86 2.0 0.5 1.2 5.0 118 chr3L 7263327 intron CG14830 - chr3L 7263386 intron CG14830 - chr3L 7263445 intron CG14830 - chr3L_11_7260001 chr3L_7260001 RAL-796 819 chr3L 7264889 7264892 chr3L 7264972 7264975 4 83 1.5 0.0 0.8 2.2 86 chr3L 7264889 intergenic not near genes chr3L 7264932 intergenic not near genes chr3L 7264975 intergenic not near genes chr3L_4_7260001 chr3L_7260001 RAL-796 820 chr3L 7285451 7285474 chr3L 7285529 7285552 8 77 1.0 5.0 3.0 2.0 101 chr3L 7285451 intron unc-13-4A - chr3L 7285502 intron unc-13-4A - chr3L 7285552 intron unc-13-4A - chr3L_8_7285001 chr3L_7285001 RAL-796 821 chr3L 7328948 7328976 chr3L 7329029 7329057 5 81 2.5 1.0 1.8 1.8 109 chr3L 7328948 intergenic CG8602 -,CG42307 +,mus312 + chr3L 7329002 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329057 intergenic CG42307 +,mus312 +,CG8602 - chr3L_5_7325001 chr3L_7325001 RAL-796 822 chr3L 7377321 7377348 chr3L 7380426 7380453 297 7 3104 0.5 5.0 2.8 1.8 3132 chr3L 7377321 intron SMSr - chr3L 7378887 intron SMSr - chr3L 7380453 intron SMSr - chr3L_7_7375001 chr3L_7375001 RAL-796 823 chr3L 7460382 7460392 chr3L 7460466 7460476 4 84 0.5 1.0 0.8 2.2 94 chr3L 7460382 intergenic not near genes chr3L 7460429 intergenic not near genes chr3L 7460476 intergenic not near genes chr3L_4_7460001 chr3L_7460001 RAL-796 824 chr3L 7574693 7574858 chr3L 7574779 7574935 9 82 0.0 0.0 0.0 9.0 242 chr3L 7574693 intergenic not near genes chr3L 7574814 intergenic not near genes chr3L 7574935 intergenic not near genes chr3L_9_7570001 chr3L_7570001 RAL-796 825 chr3L 7591145 7591180 chr3L 7591236 7591247 7 88 1.5 4.0 2.8 1.8 102 chr3L 7591145 intergenic CG7716 - chr3L 7591196 intergenic CG7716 - chr3L 7591247 intergenic CG7716 - chr3L_7_7590001 chr3L_7590001 RAL-796 826 chr3L 7752151 7752178 chr3L 7752258 7752283 9 106 4.0 6.0 5.0 1.5 132 chr3L 7752151 intron CG32373 + chr3L 7752217 intron CG32373 + chr3L 7752283 intron CG32373 + chr3L_9_7750001 chr3L_7750001 RAL-796 827 chr3L 7786407 7786446 chr3L 7786490 7786529 14 80 4.5 2.5 3.5 3.1 122 chr3L 7786407 intron CG32369 - chr3L 7786468 intron CG32369 - chr3L 7786529 intron CG32369 - chr3L_14_7785001 chr3L_7785001 RAL-796 828 chr3L 7793714 7793738 chr3L 7800766 7800790 297 8 7052 5.5 3.5 4.5 1.5 7076 chr3L 7793714 intron CG32369 - chr3L 7797252 intron CG32369 - chr3L 7800790 intron CG32369 - chr3L_8_7795001 chr3L_7795001 RAL-796 829 chr3L 7869201 7869232 chr3L 7869283 7869314 11 82 2.5 0.0 1.2 5.0 113 chr3L 7869201 5` UTR CG32365 + chr3L 7869258 5` UTR CG32365 + chr3L 7869314 5` UTR CG32365 + chr3L_11_7865001 chr3L_7865001 RAL-796 830 chr3L 7886518 7886546 chr3L 7889036 7889064 Stalker4 11 2518 2.5 4.0 3.2 2.6 2546 chr3L 7886518 intron CG32365 + chr3L 7887791 intron CG32365 + chr3L 7889064 intron CG32365 + chr3L_11_7885001 chr3L_7885001 RAL-796 831 chr3L 7985362 7985394 chr3L 7987690 7987722 NOF 5 2324 4.5 2.5 3.5 1.1 2360 chr3L 7985362 intron nmo + chr3L 7986542 intron nmo + chr3L 7987722 intron nmo + chr3L_5_7985001 chr3L_7985001 RAL-796 832 chr3L 8295791 8295828 chr3L 8295949 8295986 12 158 2.5 4.0 3.2 2.9 195 chr3L 8295791 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8295986 intergenic not near genes chr3L_12_8295001 chr3L_8295001 RAL-796 833 chr3L 8456476 8456489 chr3L 8456571 8456583 9 95 5.5 18.5 12.0 0.7 107 chr3L 8456476 intron Gug + chr3L 8456530 intron Gug + chr3L 8456583 intron Gug + chr3L_9_8455001 chr3L_8455001 RAL-796 834 chr3L 8519445 8519451 chr3L 8519539 8519551 6 99 1.0 4.5 2.8 1.6 106 chr3L 8519445 intron GstO3 + chr3L 8519498 intron GstO3 + chr3L 8519551 exon GstO3 + chr3L_6_8515001 chr3L_8515001 RAL-796 835 chr3L 8752414 8752445 chr3L 8752602 8752634 5 188 0.0 3.5 1.8 1.8 220 chr3L 8752414 intergenic not near genes chr3L 8752524 intergenic not near genes chr3L 8752634 intergenic not near genes chr3L_5_8750001 chr3L_8750001 RAL-796 836 chr3L 8765613 8765639 chr3L 8765712 8765735 6 98 1.0 3.0 2.0 2.0 122 chr3L 8765613 intron Fhos + chr3L 8765674 intron Fhos + chr3L 8765735 intron Fhos + chr3L_6_8765001 chr3L_8765001 RAL-796 837 chr3L 8791278 8791300 chr3L 8796698 8796720 I-element 6 5420 4.5 3.0 3.8 1.2 5442 chr3L 8791278 exon Fhos + chr3L 8793999 intron Fhos + chr3L 8796720 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-796 838 chr3L 8814801 8814832 chr3L 8814916 8814943 7 112 1.5 1.5 1.5 2.8 142 chr3L 8814801 intergenic not near genes chr3L 8814872 intergenic not near genes chr3L 8814943 intergenic not near genes chr3L_7_8810001 chr3L_8810001 RAL-796 839 chr3L 8839731 8839745 chr3L 8839811 8839825 5 80 3.5 1.5 2.5 1.4 94 chr3L 8839731 intron dally + chr3L 8839778 intron dally + chr3L 8839825 intron dally + chr3L_5_8835001 chr3L_8835001 RAL-796 840 chr3L 8884402 8884426 chr3L 8884601 8884625 9 198 2.0 0.0 1.0 4.5 223 chr3L 8884402 intron dally + chr3L 8884514 intron dally + chr3L 8884625 intron dally + chr3L_9_8880001 chr3L_8880001 RAL-796 841 chr3L 9076936 9076955 chr3L 9084496 9084515 412 8 7559 2.5 4.0 3.2 1.9 7579 chr3L 9076936 exon Tequila + chr3L 9080726 intron Tequila + chr3L 9084515 exon Tequila + chr3L_8_9080001 chr3L_9080001 RAL-796 842 chr3L 9130559 9130566 chr3L 9134320 9134327 412 5 3761 4.5 2.5 3.5 1.1 3768 chr3L 9130559 intergenic bol - chr3L 9132443 intergenic not near genes chr3L 9134327 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 RAL-796 843 chr3L 9164695 9164721 chr3L 9166162 9166188 hobo 7 1466 5.0 1.0 3.0 1.8 1493 chr3L 9164695 intron Rdl - chr3L 9165442 intron Rdl - chr3L 9166188 intron Rdl - chr3L_7_9165001 chr3L_9165001 RAL-796 844 chr3L 9219251 9219267 chr3L 9219915 9219938 jockey 7 668 4.0 5.5 4.8 1.2 687 chr3L 9219251 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219938 intergenic not near genes chr3L_7_9215001 chr3L_9215001 RAL-796 845 chr3L 9237498 9237510 chr3L 9237577 9237589 5 79 3.0 0.0 1.5 2.0 91 chr3L 9237498 intergenic not near genes chr3L 9237544 intergenic not near genes chr3L 9237589 intergenic not near genes chr3L_5_9235001 chr3L_9235001 RAL-796 846 chr3L 9248354 9248392 chr3L 9248439 9248477 11 85 1.0 2.5 1.8 3.9 123 chr3L 9248354 intergenic not near genes chr3L 9248416 intergenic not near genes chr3L 9248477 intergenic not near genes chr3L_11_9245001 chr3L_9245001 RAL-796 847 chr3L 9313026 9313027 chr3L 11777677 11777678 4 2464651 4.0 22.5 13.2 0.3 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-796 848 chr3L 9344205 9344223 chr3L 9344282 9344301 12 77 0.0 5.5 2.8 3.2 96 chr3L 9344205 intron PGRP-LC + chr3L 9344253 intron PGRP-LC + chr3L 9344301 intron PGRP-LC + chr3L_12_9340001 chr3L_9340001 RAL-796 849 chr3L 9415240 9415272 chr3L 9415666 9415698 9 424 12.5 3.0 7.8 1.0 458 chr3L 9415240 intron CG3967 - chr3L 9415469 intron CG3967 - chr3L 9415698 intron CG3967 - chr3L_9_9415001 chr3L_9415001 RAL-796 850 chr3L 9411911 9411934 chr3L 9415576 9415599 5 3665 24.0 3.0 13.5 0.3 3688 chr3L 9411911 exon CG3689 + chr3L 9413755 3` UTR CG3967 - chr3L 9415599 intron CG3967 - chr3L_5_9410001 chr3L_9410001 RAL-796 851 chr3L 9443518 9443542 chr3L 9445301 9445325 S-element 9 1783 2.0 5.0 3.5 2.0 1807 chr3L 9443518 intron CG33926 + chr3L 9444422 intron CG33926 + chr3L 9445325 intron CG33926 + chr3L_9_9440001 chr3L_9440001 RAL-796 852 chr3L 9501708 9501734 chr3L 9502195 9502220 roo 10 486 4.0 1.5 2.8 2.6 512 chr3L 9501708 intron path - chr3L 9501964 intron path - chr3L 9502220 intron path - chr3L_10_9500001 chr3L_9500001 RAL-796 853 chr3L 9510911 9510956 chr3L 9511004 9511034 10 80 0.0 3.0 1.5 4.0 123 chr3L 9510911 intron RpS9 - chr3L 9510972 intron RpS9 - chr3L 9511034 intron RpS9 - chr3L_10_9510001 chr3L_9510001 RAL-796 854 chr3L 9513452 9513470 chr3L 9513539 9513557 6 86 4.5 1.5 3.0 1.5 105 chr3L 9513452 intergenic CG33702 - chr3L 9513504 intergenic CG33702 - chr3L 9513557 intergenic CG33702 - chr3L_6_9510001 chr3L_9510001 RAL-796 855 chr3L 9544007 9544015 chr3L 9544116 9544124 4 108 4.0 5.5 4.8 0.7 117 chr3L 9544007 intergenic Ir67a - chr3L 9544066 intergenic Ir67a - chr3L 9544124 intergenic Ir67a - chr3L_4_9540001 chr3L_9540001 RAL-796 856 chr3L 9558046 9558054 chr3L 9558126 9558141 5 84 2.5 0.5 1.5 2.0 95 chr3L 9558046 intron CG42673 + chr3L 9558094 intron CG42673 + chr3L 9558141 intron CG42673 + chr3L_5_9555001 chr3L_9555001 RAL-796 857 chr3L 9571908 9571933 chr3L 9572256 9572281 jockey 6 348 2.5 1.0 1.8 2.1 373 chr3L 9571908 intron CG42673 + chr3L 9572094 intron CG42673 + chr3L 9572281 intron CG42673 + chr3L_6_9570001 chr3L_9570001 RAL-796 858 chr3L 9575910 9575941 chr3L 9580987 9581004 jockey 9 5075 5.0 4.0 4.5 1.6 5094 chr3L 9575910 intron CG42673 + chr3L 9578457 intron CG42673 + chr3L 9581004 intron CG42673 + chr3L_9_9575001 chr3L_9575001 RAL-796 859 chr3L 9646473 9646479 chr3L 9646594 9646604 4 123 7.0 0.0 3.5 0.9 131 chr3L 9646473 intron,intron fry -,CG33696 + chr3L 9646538 intron,intron fry -,CG33696 + chr3L 9646604 intron,intron fry -,CG33696 + chr3L_4_9645001 chr3L_9645001 RAL-796 860 chr3L 9795728 9795759 chr3L 9796640 9796672 5 913 0.0 3.0 1.5 2.0 944 chr3L 9795728 intron Zasp67 - chr3L 9796200 intron Zasp67 - chr3L 9796672 intron Zasp67 - chr3L_5_9795001 chr3L_9795001 RAL-796 861 chr3L 9824155 9824163 chr3L 9824234 9824242 5 79 2.0 0.0 1.0 2.5 87 chr3L 9824155 intron CG43897 + chr3L 9824198 intron CG43897 + chr3L 9824242 intron CG43897 + chr3L_5_9820001 chr3L_9820001 RAL-796 862 chr3L 9829049 9829080 chr3L 9829131 9829162 10 82 2.5 1.0 1.8 3.6 113 chr3L 9829049 intron CG43897 + chr3L 9829106 intron CG43897 + chr3L 9829162 intron CG43897 + chr3L_10_9825001 chr3L_9825001 RAL-796 863 chr3L 9848519 9848543 chr3L 9848595 9848619 4 73 0.5 0.5 0.5 2.7 100 chr3L 9848519 intron RasGAP1 - chr3L 9848569 intron RasGAP1 - chr3L 9848619 intron RasGAP1 - chr3L_4_9845001 chr3L_9845001 RAL-796 864 chr3L 9871205 9871219 chr3L 9871300 9871315 5 95 2.0 1.0 1.5 2.0 110 chr3L 9871205 intergenic not near genes chr3L 9871260 intergenic not near genes chr3L 9871315 intergenic not near genes chr3L_5_9870001 chr3L_9870001 RAL-796 865 chr3L 9918882 9918914 chr3L 9918977 9919009 16 95 3.5 1.5 2.5 4.6 127 chr3L 9918882 intron CG34356 + chr3L 9918946 intron CG34356 + chr3L 9919009 intron CG34356 + chr3L_16_9915001 chr3L_9915001 RAL-796 866 chr3L 9929675 9929696 chr3L 9938455 9938475 roo 6 8780 5.0 4.0 4.5 1.1 8800 chr3L 9929675 intron CG34356 + chr3L 9934075 intron CG34356 + chr3L 9938475 intron CG34356 + chr3L_6_9930001 chr3L_9930001 RAL-796 867 chr3L 10014285 10014308 chr3L 10014433 10014456 7 146 3.5 0.0 1.8 2.5 171 chr3L 10014285 intron dpr6 + chr3L 10014370 intron dpr6 + chr3L 10014456 intron dpr6 + chr3L_7_10010001 chr3L_10010001 RAL-796 868 chr3L 10191288 10191317 chr3L 10191399 10191427 9 111 1.5 3.5 2.5 2.6 139 chr3L 10191288 intron ect - chr3L 10191358 intron ect - chr3L 10191427 intron ect - chr3L_9_10190001 chr3L_10190001 RAL-796 869 chr3L 10298667 10298700 chr3L 10298754 10298787 7 87 0.0 0.5 0.2 5.8 120 chr3L 10298667 intergenic not near genes chr3L 10298727 intergenic not near genes chr3L 10298787 intergenic not near genes chr3L_7_10295001 chr3L_10295001 RAL-796 870 chr3L 10308738 10308775 chr3L 10308815 10308852 12 77 0.5 2.0 1.2 5.5 114 chr3L 10308738 intergenic not near genes chr3L 10308795 intergenic not near genes chr3L 10308852 intergenic not near genes chr3L_12_10305001 chr3L_10305001 RAL-796 871 chr3L 10381723 10381745 chr3L 10381799 10381831 4 83 0.5 1.5 1.0 2.0 108 chr3L 10381723 intergenic not near genes chr3L 10381777 intergenic not near genes chr3L 10381831 intergenic not near genes chr3L_4_10380001 chr3L_10380001 RAL-796 872 chr3L 10399532 10399551 chr3L 10399631 10399650 8 99 3.5 2.0 2.8 2.1 118 chr3L 10399532 intergenic not near genes chr3L 10399591 intergenic not near genes chr3L 10399650 intergenic not near genes chr3L_8_10395001 chr3L_10395001 RAL-796 873 chr3L 10414942 10414972 chr3L 10417310 10417344 Doc 12 2371 3.0 0.5 1.8 4.3 2402 chr3L 10414942 intergenic CG12362 + chr3L 10416143 intergenic not near genes chr3L 10417344 intergenic not near genes chr3L_12_10415001 chr3L_10415001 RAL-796 874 chr3L 10417568 10417603 chr3L 10417645 10417680 14 77 1.5 0.0 0.8 7.8 112 chr3L 10417568 intergenic not near genes chr3L 10417624 intergenic not near genes chr3L 10417680 intergenic not near genes chr3L_14_10415001 chr3L_10415001 RAL-796 875 chr3L 10469934 10469962 chr3L 10470010 10470038 5 76 2.5 1.0 1.8 1.8 104 chr3L 10469934 intergenic not near genes chr3L 10469986 intergenic not near genes chr3L 10470038 intergenic not near genes chr3L_5_10465001 chr3L_10465001 RAL-796 876 chr3L 10501233 10501261 chr3L 10501317 10501345 5 84 2.5 1.0 1.8 1.8 112 chr3L 10501233 intron A2bp1 + chr3L 10501289 intron A2bp1 + chr3L 10501345 intron A2bp1 + chr3L_5_10500001 chr3L_10500001 RAL-796 877 chr3L 10536116 10536135 chr3L 10536193 10536212 8 77 3.5 0.5 2.0 2.7 96 chr3L 10536116 intron A2bp1 + chr3L 10536164 intron A2bp1 + chr3L 10536212 intron A2bp1 + chr3L_8_10535001 chr3L_10535001 RAL-796 878 chr3L 10542353 10542385 chr3L 10544928 10544960 7 2575 10.5 19.5 15.0 0.4 2607 chr3L 10542353 intron A2bp1 + chr3L 10543656 intron A2bp1 + chr3L 10544960 intron A2bp1 + chr3L_7_10540001 chr3L_10540001 RAL-796 879 chr3L 10600455 10600468 chr3L 10600537 10600550 6 82 4.5 1.5 3.0 1.5 95 chr3L 10600455 intergenic not near genes chr3L 10600502 intergenic not near genes chr3L 10600550 intergenic not near genes chr3L_6_10600001 chr3L_10600001 RAL-796 880 chr3L 10658096 10658201 chr3L 10658173 10658327 7 105 0.0 0.0 0.0 7.0 231 chr3L 10658096 intron CG32066 - chr3L 10658212 intron CG32066 - chr3L 10658327 intron CG32066 - chr3L_7_10655001 chr3L_10655001 RAL-796 881 chr3L 10678737 10678751 chr3L 10678820 10678834 4 83 2.5 4.5 3.5 0.9 97 chr3L 10678737 intron simj + chr3L 10678786 intron simj + chr3L 10678834 intron simj + chr3L_4_10675001 chr3L_10675001 RAL-796 882 chr3L 10745537 10745560 chr3L 10745617 10745640 8 80 2.0 1.0 1.5 3.2 103 chr3L 10745537 intergenic not near genes chr3L 10745588 intergenic not near genes chr3L 10745640 intergenic not near genes chr3L_8_10745001 chr3L_10745001 RAL-796 883 chr3L 10956452 10956466 chr3L 10956568 10956584 5 118 1.0 3.5 2.2 1.6 132 chr3L 10956452 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956584 intergenic not near genes chr3L_5_10955001 chr3L_10955001 RAL-796 884 chr3L 11083501 11083540 chr3L 11083599 11083638 7 98 2.5 3.0 2.8 1.8 137 chr3L 11083501 intron JIL-1 - chr3L 11083570 intron JIL-1 - chr3L 11083638 intron JIL-1 - chr3L_7_11080001 chr3L_11080001 RAL-796 885 chr3L 11085676 11085698 chr3L 11085759 11085780 5 83 2.0 2.5 2.2 1.6 104 chr3L 11085676 exon JIL-1 - chr3L 11085728 intron JIL-1 - chr3L 11085780 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-796 886 chr3L 11087067 11087088 chr3L 11088856 11088877 S-element 8 1789 0.5 4.0 2.2 2.5 1810 chr3L 11087067 intron JIL-1 - chr3L 11087972 intron JIL-1 - chr3L 11088877 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 RAL-796 887 chr3L 11105291 11105325 chr3L 11107002 11107036 X-element 6 1711 2.5 1.0 1.8 2.1 1745 chr3L 11105291 intergenic not near genes chr3L 11106164 intergenic not near genes chr3L 11107036 exon CG32073 - chr3L_6_11105001 chr3L_11105001 RAL-796 888 chr3L 11135531 11135802 chr3L 11135761 11135887 11 98 0.0 0.0 0.0 11.0 356 chr3L 11135531 intergenic CG14143 + chr3L 11135709 intergenic CG14143 +,CG32082 + chr3L 11135887 intergenic CG32082 +,CG14143 + chr3L_11_11135001 chr3L_11135001 RAL-796 889 chr3L 11264466 11264489 chr3L 11271418 11271441 17.6 4 6952 4.5 2.0 3.2 1.0 6975 chr3L 11264466 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271441 intergenic not near genes chr3L_4_11265001 chr3L_11265001 RAL-796 890 chr3L 11273200 11273221 chr3L 11273280 11273301 15 80 3.5 4.5 4.0 3.0 101 chr3L 11273200 intergenic not near genes chr3L 11273250 intergenic not near genes chr3L 11273301 intergenic not near genes chr3L_15_11270001 chr3L_11270001 RAL-796 891 chr3L 11290626 11290655 chr3L 11290949 11290978 8 323 2.5 4.0 3.2 1.9 352 chr3L 11290626 intron CG6175 - chr3L 11290802 intron CG6175 - chr3L 11290978 intron CG6175 - chr3L_8_11290001 chr3L_11290001 RAL-796 892 chr3L 11329697 11329728 chr3L 11332902 11332919 jockey 8 3202 1.5 1.5 1.5 3.2 3222 chr3L 11329697 intergenic not near genes chr3L 11331308 intergenic not near genes chr3L 11332919 intergenic not near genes chr3L_8_11330001 chr3L_11330001 RAL-796 893 chr3L 11389744 11389750 chr3L 11389830 11389835 4 85 0.5 2.0 1.2 1.8 91 chr3L 11389744 intergenic not near genes chr3L 11389790 intergenic not near genes chr3L 11389835 intergenic not near genes chr3L_4_11385001 chr3L_11385001 RAL-796 894 chr3L 11548859 11548876 chr3L 11548946 11548963 11 86 4.5 3.5 4.0 2.2 104 chr3L 11548859 intron Mob2 - chr3L 11548911 intron Mob2 - chr3L 11548963 intron Mob2 - chr3L_11_11545001 chr3L_11545001 RAL-796 895 chr3L 11564790 11564809 chr3L 11572407 11572411 412 5 7612 2.0 1.5 1.8 1.8 7621 chr3L 11564790 exon CG33267 + chr3L 11568600 intron CG33267 + chr3L 11572411 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-796 896 chr3L 11579560 11579585 chr3L 11579665 11579691 13 105 2.5 2.0 2.2 4.1 131 chr3L 11579560 intergenic CG43390 - chr3L 11579626 intergenic CG43390 - chr3L 11579691 intergenic CG43390 - chr3L_13_11575001 chr3L_11575001 RAL-796 897 chr3L 11659427 11659450 chr3L 11659751 11659768 6 324 0.5 1.5 1.0 3.0 341 chr3L 11659427 intron CG32085 - chr3L 11659598 intron CG32085 - chr3L 11659768 intron CG32085 - chr3L_6_11655001 chr3L_11655001 RAL-796 898 chr3L 11663753 11663758 chr3L 11663878 11663883 5 125 1.5 0.5 1.0 2.5 130 chr3L 11663753 intron CG32085 - chr3L 11663818 intron CG32085 - chr3L 11663883 intron CG32085 - chr3L_5_11660001 chr3L_11660001 RAL-796 899 chr3L 11723088 11723108 chr3L 11727883 11727903 Doc 5 4795 2.5 2.0 2.2 1.6 4815 chr3L 11723088 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727903 3` UTR Bmcp + chr3L_5_11725001 chr3L_11725001 RAL-796 900 chr3L 11744016 11744037 chr3L 11744124 11744144 9 108 5.0 0.0 2.5 2.6 128 chr3L 11744016 exon CG6024 - chr3L 11744080 intron CG6024 - chr3L 11744144 intron CG6024 - chr3L_9_11740001 chr3L_11740001 RAL-796 901 chr3L 11757916 11757932 chr3L 11758013 11758029 4 97 2.0 0.0 1.0 2.0 113 chr3L 11757916 intron CG6024 - chr3L 11757972 intron CG6024 - chr3L 11758029 intron CG6024 - chr3L_4_11755001 chr3L_11755001 RAL-796 902 chr3L 802566 802566 chr3L 11777678 11777678 5 10975112 11.0 22.5 16.8 0.3 10975112 chr3L 802566 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_6290001 chr3L_6290001 RAL-796 903 chr3L 11903777 11903790 chr3L 11903868 11903881 5 91 0.0 0.0 0.0 5.0 104 chr3L 11903777 intron CG44837 - chr3L 11903829 intron CG44837 - chr3L 11903881 intron CG44837 - chr3L_5_11900001 chr3L_11900001 RAL-796 904 chr3L 11943509 11943513 chr3L 11943610 11943614 4 100 2.0 2.0 2.0 1.3 105 chr3L 11943509 intergenic Rpt4R +,CG5883 - chr3L 11943562 intergenic Rpt4R +,CG5883 - chr3L 11943614 intergenic CG5883 -,Rpt4R + chr3L_4_11940001 chr3L_11940001 RAL-796 905 chr3L 11984575 11984601 chr3L 11984665 11984692 7 88 3.0 5.0 4.0 1.4 117 chr3L 11984575 intergenic CG6938 + chr3L 11984634 intergenic CG6938 + chr3L 11984692 intergenic CG6938 + chr3L_7_11980001 chr3L_11980001 RAL-796 906 chr3L 12013911 12013935 chr3L 12014002 12014025 11 91 2.5 3.5 3.0 2.8 114 chr3L 12013911 intron rols - chr3L 12013968 intron rols - chr3L 12014025 intron rols - chr3L_11_12010001 chr3L_12010001 RAL-796 907 chr3L 12052705 12052722 chr3L 12052794 12052811 5 89 2.5 2.5 2.5 1.4 106 chr3L 12052705 intron rols - chr3L 12052758 intron rols - chr3L 12052811 intron rols - chr3L_5_12050001 chr3L_12050001 RAL-796 908 chr3L 12089088 12089111 chr3L 12089168 12089190 5 80 4.0 2.0 3.0 1.2 102 chr3L 12089088 3` UTR CG17154 + chr3L 12089139 3` UTR CG17154 + chr3L 12089190 3` UTR CG17154 + chr3L_5_12085001 chr3L_12085001 RAL-796 909 chr3L 12203776 12203807 chr3L 12203854 12203875 8 74 3.0 1.0 2.0 2.7 99 chr3L 12203776 5` UTR Adk1 - chr3L 12203826 5` UTR Adk1 - chr3L 12203875 5` UTR Adk1 - chr3L_8_12200001 chr3L_12200001 RAL-796 910 chr3L 12304104 12304118 chr3L 12304180 12304186 5 73 1.5 6.5 4.0 1.0 82 chr3L 12304104 intergenic not near genes chr3L 12304145 intergenic not near genes chr3L 12304186 intergenic not near genes chr3L_5_12300001 chr3L_12300001 RAL-796 911 chr3L 12317419 12317453 chr3L 12317520 12317550 9 99 2.5 2.5 2.5 2.6 131 chr3L 12317419 intergenic not near genes chr3L 12317484 intergenic not near genes chr3L 12317550 intergenic not near genes chr3L_9_12315001 chr3L_12315001 RAL-796 912 chr3L 12390969 12391004 chr3L 12391069 12391104 21 99 4.5 4.0 4.2 4.0 135 chr3L 12390969 5` UTR Ncc69 - chr3L 12391036 5` UTR Ncc69 - chr3L 12391104 5` UTR Ncc69 - chr3L_21_12390001 chr3L_12390001 RAL-796 913 chr3L 12411029 12411066 chr3L 12411139 12411176 11 110 1.0 2.0 1.5 4.4 147 chr3L 12411029 intron CG32103 - chr3L 12411102 intron CG32103 - chr3L 12411176 intron CG32103 - chr3L_11_12410001 chr3L_12410001 RAL-796 914 chr3L 12566821 12566836 chr3L 12566926 12566940 7 104 0.5 0.5 0.5 4.7 119 chr3L 12566821 intron sowah - chr3L 12566880 intron sowah - chr3L 12566940 intron sowah - chr3L_7_12565001 chr3L_12565001 RAL-796 915 chr3L 12566837 12566846 chr3L 12566921 12566951 6 86 0.5 0.5 0.5 4.0 114 chr3L 12566837 intron sowah - chr3L 12566894 intron sowah - chr3L 12566951 intron sowah - chr3L_6_12565001 chr3L_12565001 RAL-796 916 chr3L 12587348 12587375 chr3L 12587431 12587459 4 83 0.5 0.0 0.2 3.3 111 chr3L 12587348 intron ara + chr3L 12587404 intron ara + chr3L 12587459 intron ara + chr3L_4_12585001 chr3L_12585001 RAL-796 917 chr3L 12677224 12677255 chr3L 12677323 12677354 7 99 0.0 1.0 0.5 4.7 130 chr3L 12677224 intergenic not near genes chr3L 12677289 intergenic not near genes chr3L 12677354 intergenic not near genes chr3L_7_12675001 chr3L_12675001 RAL-796 918 chr3L 12874933 12874961 chr3L 12877225 12877253 jockey 12 2292 2.5 2.5 2.5 3.4 2320 chr3L 12874933 intergenic not near genes chr3L 12876093 intergenic not near genes chr3L 12877253 intergenic not near genes chr3L_12_12875001 chr3L_12875001 RAL-796 919 chr3L 12894800 12894818 chr3L 12894878 12894896 10 78 8.0 6.0 7.0 1.2 96 chr3L 12894800 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894896 intergenic CG14118 + chr3L_10_12890001 chr3L_12890001 RAL-796 920 chr3L 12955136 12955149 chr3L 12955212 12955225 4 76 4.0 2.5 3.2 1.0 89 chr3L 12955136 intergenic CG10752 - chr3L 12955180 intergenic not near genes chr3L 12955225 intergenic not near genes chr3L_4_12955001 chr3L_12955001 RAL-796 921 chr3L 12957788 12957816 chr3L 12962269 12962298 copia 8 4482 3.5 4.0 3.8 1.7 4510 chr3L 12957788 intergenic not near genes chr3L 12960043 intergenic not near genes chr3L 12962298 intergenic not near genes chr3L_8_12960001 chr3L_12960001 RAL-796 922 chr3L 12966131 12966155 chr3L 12966220 12966239 7 87 2.5 1.5 2.0 2.3 108 chr3L 12966131 intron Or69a - chr3L 12966185 intron Or69a - chr3L 12966239 intron Or69a - chr3L_7_12965001 chr3L_12965001 RAL-796 923 chr3L 12978519 12978782 chr3L 12978601 12978859 11 79 4.0 1.0 2.5 3.1 340 chr3L 12978519 intergenic not near genes chr3L 12978689 intergenic not near genes chr3L 12978859 intergenic not near genes chr3L_11_12975001 chr3L_12975001 RAL-796 924 chr3L 12980519 12980550 chr3L 12980607 12980638 7 88 2.5 0.0 1.2 3.2 119 chr3L 12980519 intergenic not near genes chr3L 12980578 intergenic not near genes chr3L 12980638 intergenic not near genes chr3L_7_12980001 chr3L_12980001 RAL-796 925 chr3L 13007702 13007727 chr3L 13007794 13007819 7 92 0.5 0.0 0.2 5.8 117 chr3L 13007702 exon CG11263 + chr3L 13007760 3` UTR CG11263 + chr3L 13007819 3` UTR CG11263 + chr3L_7_13005001 chr3L_13005001 RAL-796 926 chr3L 13031575 13031608 chr3L 13031662 13031695 10 87 3.5 2.0 2.8 2.6 120 chr3L 13031575 intron CG17672 + chr3L 13031635 intron CG17672 + chr3L 13031695 intron CG17672 + chr3L_10_13030001 chr3L_13030001 RAL-796 927 chr3L 13034462 13034492 chr3L 13034540 13034572 8 79 3.5 1.5 2.5 2.3 110 chr3L 13034462 intron CG17672 + chr3L 13034517 intron CG17672 + chr3L 13034572 intron CG17672 + chr3L_8_13030001 chr3L_13030001 RAL-796 928 chr3L 13092069 13092091 chr3L 13092146 13092168 4 77 2.0 1.0 1.5 1.6 99 chr3L 13092069 intergenic not near genes chr3L 13092118 intergenic not near genes chr3L 13092168 intergenic not near genes chr3L_4_13090001 chr3L_13090001 RAL-796 929 chr3L 13137661 13137680 chr3L 13137736 13137763 7 82 0.5 2.0 1.2 3.2 102 chr3L 13137661 intergenic not near genes chr3L 13137712 intergenic not near genes chr3L 13137763 intergenic not near genes chr3L_7_13135001 chr3L_13135001 RAL-796 930 chr3L 13161771 13161797 chr3L 13161847 13161872 5 76 1.5 1.5 1.5 2.0 101 chr3L 13161771 intergenic not near genes chr3L 13161822 intergenic not near genes chr3L 13161872 intergenic not near genes chr3L_5_13160001 chr3L_13160001 RAL-796 931 chr3L 13218899 13218934 chr3L 13218983 13219005 12 82 2.0 2.0 2.0 4.0 106 chr3L 13218899 intergenic CR45098 - chr3L 13218952 intergenic CR45098 - chr3L 13219005 intergenic CR45098 - chr3L_12_13215001 chr3L_13215001 RAL-796 932 chr3L 13254729 13254755 chr3L 13254845 13254868 7 115 5.0 2.0 3.5 1.6 139 chr3L 13254729 intron caps + chr3L 13254798 intron caps + chr3L 13254868 intron caps + chr3L_7_13250001 chr3L_13250001 RAL-796 933 chr3L 13267283 13267296 chr3L 13267396 13267409 6 113 4.5 1.0 2.8 1.6 126 chr3L 13267283 intron caps + chr3L 13267346 intron caps + chr3L 13267409 intron caps + chr3L_6_13265001 chr3L_13265001 RAL-796 934 chr3L 13294393 13294426 chr3L 13294725 13294757 10 332 3.5 2.5 3.0 2.5 364 chr3L 13294393 intergenic not near genes chr3L 13294575 intergenic not near genes chr3L 13294757 intergenic not near genes chr3L_10_13290001 chr3L_13290001 RAL-796 935 chr3L 13296532 13296547 chr3L 13296623 13296638 6 91 3.0 1.0 2.0 2.0 106 chr3L 13296532 3` UTR Sfp70A4 - chr3L 13296585 3` UTR Sfp70A4 - chr3L 13296638 3` UTR Sfp70A4 - chr3L_6_13295001 chr3L_13295001 RAL-796 936 chr3L 13475658 13475690 chr3L 13475774 13475806 6 116 0.0 1.5 0.8 3.3 148 chr3L 13475658 intergenic not near genes chr3L 13475732 intergenic not near genes chr3L 13475806 intergenic not near genes chr3L_6_13475001 chr3L_13475001 RAL-796 937 chr3L 13487884 13487916 chr3L 13488081 13488114 13 197 5.0 3.5 4.2 2.5 230 chr3L 13487884 intron Tgi + chr3L 13487999 intron Tgi + chr3L 13488114 intron Tgi + chr3L_13_13485001 chr3L_13485001 RAL-796 938 chr3L 13486282 13486313 chr3L 13489483 13489514 8 3203 19.5 28.0 23.8 0.3 3232 chr3L 13486282 intergenic Abp1 - chr3L 13487898 intron Tgi + chr3L 13489514 intron Tgi + chr3L_8_13485001 chr3L_13485001 RAL-796 939 chr3L 13525162 13525189 chr3L 13532958 13532985 roo 16 7795 4.5 5.5 5.0 2.7 7823 chr3L 13525162 intergenic not near genes chr3L 13529074 intergenic not near genes chr3L 13532985 intergenic not near genes chr3L_16_13525001 chr3L_13525001 RAL-796 940 chr3L 13598216 13598229 chr3L 13598293 13598304 5 77 4.0 0.0 2.0 1.7 88 chr3L 13598216 intron bru-3 - chr3L 13598260 intron bru-3 - chr3L 13598304 intron bru-3 - chr3L_5_13595001 chr3L_13595001 RAL-796 941 chr3L 13605332 13605373 chr3L 13605411 13605452 8 74 2.0 3.0 2.5 2.3 120 chr3L 13605332 intron bru-3 - chr3L 13605392 intron bru-3 - chr3L 13605452 intron bru-3 - chr3L_8_13605001 chr3L_13605001 RAL-796 942 chr3L 13804544 13804573 chr3L 13822830 13822859 roo 8 18286 2.5 3.5 3.0 2.0 18315 chr3L 13804544 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822859 intergenic not near genes chr3L_8_13810001 chr3L_13810001 RAL-796 943 chr3L 13931348 13931368 chr3L 13931453 13931473 5 105 0.0 0.0 0.0 5.0 125 chr3L 13931348 intron Gl + chr3L 13931410 intron Gl + chr3L 13931473 intron Gl + chr3L_5_13930001 chr3L_13930001 RAL-796 944 chr3L 14004447 14004467 chr3L 14004526 14004546 12 78 4.5 4.0 4.2 2.3 99 chr3L 14004447 intron upSET + chr3L 14004496 intron upSET + chr3L 14004546 intron upSET + chr3L_12_14000001 chr3L_14000001 RAL-796 945 chr3L 14239989 14240007 chr3L 14240086 14240104 9 96 2.0 2.5 2.2 2.8 115 chr3L 14239989 intergenic not near genes chr3L 14240046 intergenic not near genes chr3L 14240104 intergenic not near genes chr3L_9_14240001 chr3L_14240001 RAL-796 946 chr3L 14245567 14245591 chr3L 14245661 14245685 1360 10 94 4.5 2.5 3.5 2.2 118 chr3L 14245567 3` UTR CR44561 - chr3L 14245626 3` UTR CR44561 - chr3L 14245685 3` UTR CR44561 - chr3L_10_14245001 chr3L_14245001 RAL-796 947 chr3L 14295985 14296013 chr3L 14296468 14296499 roo 10 486 0.5 2.0 1.2 4.5 514 chr3L 14295985 intron fz + chr3L 14296242 intron fz + chr3L 14296499 intron fz + chr3L_10_14295001 chr3L_14295001 RAL-796 948 chr3L 14312035 14312052 chr3L 14316839 14316866 X-element 7 4812 2.5 1.5 2.0 2.3 4831 chr3L 14312035 exon fz + chr3L 14314450 intron fz + chr3L 14316866 intron fz + chr3L_7_14310001 chr3L_14310001 RAL-796 949 chr3L 14356521 14356552 chr3L 14356601 14356631 10 80 2.0 4.0 3.0 2.5 110 chr3L 14356521 intron fz + chr3L 14356576 intron fz + chr3L 14356631 intron fz + chr3L_10_14355001 chr3L_14355001 RAL-796 950 chr3L 14432951 14432984 chr3L 14433033 14433066 9 82 2.5 3.0 2.8 2.4 115 chr3L 14432951 intron bbg - chr3L 14433008 intron bbg - chr3L 14433066 intron bbg - chr3L_9_14430001 chr3L_14430001 RAL-796 951 chr3L 14468446 14468473 chr3L 14473652 14473679 copia 4 5206 2.0 0.5 1.2 1.8 5233 chr3L 14468446 intron bbg - chr3L 14471062 intron bbg - chr3L 14473679 intron bbg - chr3L_4_14470001 chr3L_14470001 RAL-796 952 chr3L 14486021 14486047 chr3L 14486102 14486128 8 80 2.5 0.5 1.5 3.2 107 chr3L 14486021 intron bbg - chr3L 14486074 intron bbg - chr3L 14486128 intron bbg - chr3L_8_14485001 chr3L_14485001 RAL-796 953 chr3L 14599382 14599402 chr3L 14599459 14599479 8 77 2.5 4.5 3.5 1.8 97 chr3L 14599382 5` UTR HGTX - chr3L 14599430 5` UTR HGTX - chr3L 14599479 5` UTR HGTX - chr3L_8_14595001 chr3L_14595001 RAL-796 954 chr3L 14721206 14721208 chr3L 14723022 14723051 Rt1c 6 1833 3.0 3.5 3.2 1.4 1845 chr3L 14721206 intron ome + chr3L 14722128 intron ome + chr3L 14723051 intron ome + chr3L_6_14720001 chr3L_14720001 RAL-796 955 chr3L 14870048 14870074 chr3L 14870124 14870150 6 76 1.0 1.5 1.2 2.7 102 chr3L 14870048 intron CG17839 + chr3L 14870099 intron CG17839 + chr3L 14870150 intron CG17839 + chr3L_6_14870001 chr3L_14870001 RAL-796 956 chr3L 14958432 14958454 chr3L 14958515 14958537 9 83 2.5 5.5 4.0 1.8 105 chr3L 14958432 intergenic not near genes chr3L 14958484 intergenic not near genes chr3L 14958537 intergenic not near genes chr3L_9_14955001 chr3L_14955001 RAL-796 957 chr3L 15286525 15286540 chr3L 15286661 15286676 10 136 3.0 0.0 1.5 4.0 151 chr3L 15286525 intergenic not near genes chr3L 15286600 intergenic not near genes chr3L 15286676 intergenic not near genes chr3L_10_15285001 chr3L_15285001 RAL-796 958 chr3L 15307442 15307475 chr3L 15307522 15307555 11 80 1.5 2.0 1.8 3.9 113 chr3L 15307442 intron CG7255 + chr3L 15307498 intron CG7255 + chr3L 15307555 intron CG7255 + chr3L_11_15305001 chr3L_15305001 RAL-796 959 chr3L 15406019 15406054 chr3L 15406101 15406137 5 83 0.5 2.0 1.2 2.3 118 chr3L 15406019 intergenic not near genes chr3L 15406078 intergenic not near genes chr3L 15406137 intergenic not near genes chr3L_5_15405001 chr3L_15405001 RAL-796 960 chr3L 15444653 15444684 chr3L 15444744 15444778 5 93 5.5 2.5 4.0 1.0 125 chr3L 15444653 intergenic not near genes chr3L 15444716 intergenic not near genes chr3L 15444778 intergenic not near genes chr3L_5_15440001 chr3L_15440001 RAL-796 961 chr3L 15447937 15447958 chr3L 15448032 15448053 6 95 3.0 1.5 2.2 1.9 116 chr3L 15447937 intergenic not near genes chr3L 15447995 intergenic not near genes chr3L 15448053 intergenic not near genes chr3L_6_15445001 chr3L_15445001 RAL-796 962 chr3L 15466038 15466056 chr3L 15466120 15466138 4 82 5.0 0.0 2.5 1.1 100 chr3L 15466038 intergenic not near genes chr3L 15466088 intergenic not near genes chr3L 15466138 intergenic not near genes chr3L_4_15465001 chr3L_15465001 RAL-796 963 chr3L 15511302 15511318 chr3L 15511382 15511398 8 80 1.5 2.5 2.0 2.7 96 chr3L 15511302 intron Eip71CD + chr3L 15511350 intron Eip71CD + chr3L 15511398 intron Eip71CD + chr3L_8_15510001 chr3L_15510001 RAL-796 964 chr3L 15828017 15828047 chr3L 15828105 15828135 12 86 0.5 5.0 2.8 3.2 118 chr3L 15828017 exon dbo + chr3L 15828076 intron dbo + chr3L 15828135 intron dbo + chr3L_12_15825001 chr3L_15825001 RAL-796 965 chr3L 15929197 15929224 chr3L 15938344 15938371 roo 7 9147 3.5 2.5 3.0 1.8 9174 chr3L 15929197 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938371 intron Pka-C3 - chr3L_7_15930001 chr3L_15930001 RAL-796 966 chr3L 15948758 15948768 chr3L 15948840 15948847 4 82 2.5 3.0 2.8 1.1 89 chr3L 15948758 intron Pka-C3 - chr3L 15948802 intron Pka-C3 - chr3L 15948847 intron Pka-C3 - chr3L_4_15945001 chr3L_15945001 RAL-796 967 chr3L 15981673 15981683 chr3L 15981759 15981769 4 86 1.0 1.0 1.0 2.0 96 chr3L 15981673 intron,3` UTR brm -,CG17027 + chr3L 15981721 intron,3` UTR brm -,CG17027 + chr3L 15981769 intron,3` UTR brm -,CG17027 + chr3L_4_15980001 chr3L_15980001 RAL-796 968 chr3L 15987716 15987745 chr3L 15989945 15989973 10 2229 34.0 27.0 30.5 0.3 2257 chr3L 15987716 exon DNApol-delta - chr3L 15988844 exon Hip14 + chr3L 15989973 exon Hip14 + chr3L_10_15985001 chr3L_15985001 RAL-796 969 chr3L 16070741 16070762 chr3L 16070818 16070839 4 77 1.0 1.5 1.2 1.8 98 chr3L 16070741 intron Mbs + chr3L 16070790 intron Mbs + chr3L 16070839 exon Mbs + chr3L_4_16070001 chr3L_16070001 RAL-796 970 chr3L 16162599 16162624 chr3L 16162683 16162708 6 84 1.5 1.5 1.5 2.4 109 chr3L 16162599 intron CG5151 - chr3L 16162654 intron CG5151 - chr3L 16162708 intron CG5151 - chr3L_6_16160001 chr3L_16160001 RAL-796 971 chr3L 16182071 16182089 chr3L 16182191 16182209 4 120 3.5 2.0 2.8 1.1 138 chr3L 16182071 intergenic not near genes chr3L 16182140 intergenic not near genes chr3L 16182209 intergenic not near genes chr3L_4_16180001 chr3L_16180001 RAL-796 972 chr3L 16184107 16184141 chr3L 16188926 16188960 X-element 8 4819 2.0 2.5 2.2 2.5 4853 chr3L 16184107 intergenic not near genes chr3L 16186534 intergenic not near genes chr3L 16188960 intergenic not near genes chr3L_8_16185001 chr3L_16185001 RAL-796 973 chr3L 16293033 16293051 chr3L 16293268 16293273 4 232 2.0 2.0 2.0 1.3 240 chr3L 16293033 intergenic not near genes chr3L 16293153 intergenic not near genes chr3L 16293273 intergenic not near genes chr3L_4_16290001 chr3L_16290001 RAL-796 974 chr3L 16440764 16440790 chr3L 16440847 16440873 5 83 3.0 5.0 4.0 1.0 109 chr3L 16440764 intron,intron CG33158 +,dsx-c73A - chr3L 16440818 intron,intron CG33158 +,dsx-c73A - chr3L 16440873 intron,intron CG33158 +,dsx-c73A - chr3L_5_16440001 chr3L_16440001 RAL-796 975 chr3L 16443856 16443879 chr3L 16446196 16446219 Doc 10 2340 2.5 6.5 4.5 1.8 2363 chr3L 16443856 intron,intron CG33158 +,dsx-c73A - chr3L 16445038 intron,intron CG33158 +,dsx-c73A - chr3L 16446219 intron,intron CG33158 +,dsx-c73A - chr3L_10_16445001 chr3L_16445001 RAL-796 976 chr3L 16493978 16493991 chr3L 16494495 16494508 jockey 4 517 8.5 7.0 7.8 0.5 530 chr3L 16493978 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494243 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494508 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_4_16490001 chr3L_16490001 RAL-796 977 chr3L 16540053 16540087 chr3L 16540141 16540175 8 88 2.0 2.5 2.2 2.5 122 chr3L 16540053 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540175 intron CG43373 - chr3L_8_16540001 chr3L_16540001 RAL-796 978 chr3L 16616513 16616541 chr3L 16621841 16621869 297 10 5328 1.5 3.5 2.5 2.9 5356 chr3L 16616513 3` UTR Abl - chr3L 16619191 3` UTR Abl - chr3L 16621869 3` UTR Abl - chr3L_10_16615001 chr3L_16615001 RAL-796 979 chr3L 16633274 16633306 chr3L 16633424 16633435 4 145 4.0 0.5 2.2 1.2 161 chr3L 16633274 intron Abl - chr3L 16633354 intron Abl - chr3L 16633435 intron Abl - chr3L_4_16630001 chr3L_16630001 RAL-796 980 chr3L 16684033 16684046 chr3L 16689264 16689277 copia 6 5231 2.5 0.5 1.5 2.4 5244 chr3L 16684033 intron,intron Lasp -,CG43954 - chr3L 16686655 intron,intron Lasp -,CG43954 - chr3L 16689277 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_6_16685001 chr3L_16685001 RAL-796 981 chr3L 16808043 16808073 chr3L 16808119 16808149 4 76 1.5 0.0 0.8 2.2 106 chr3L 16808043 intron nudC + chr3L 16808096 intron nudC + chr3L 16808149 intron nudC + chr3L_4_16805001 chr3L_16805001 RAL-796 982 chr3L 16818746 16818774 chr3L 16818822 16818850 6 76 3.0 1.5 2.2 1.9 104 chr3L 16818746 intron,intron nudC +,CG13024 - chr3L 16818798 intron,intron nudC +,CG13024 - chr3L 16818850 intron,intron nudC +,CG13024 - chr3L_6_16815001 chr3L_16815001 RAL-796 983 chr3L 16867549 16867566 chr3L 16867627 16867644 5 78 3.5 1.5 2.5 1.4 95 chr3L 16867549 intron Lmpt + chr3L 16867596 intron Lmpt + chr3L 16867644 intron Lmpt + chr3L_5_16865001 chr3L_16865001 RAL-796 984 chr3L 16893065 16893093 chr3L 16893380 16893408 8 315 2.5 5.5 4.0 1.6 343 chr3L 16893065 intron Lmpt + chr3L 16893236 intron Lmpt + chr3L 16893408 intron Lmpt + chr3L_8_16890001 chr3L_16890001 RAL-796 985 chr3L 16945733 16945749 chr3L 16954886 16954902 roo 10 9151 6.0 1.5 3.8 2.1 9169 chr3L 16945733 exon Obp73a + chr3L 16950318 intergenic not near genes chr3L 16954902 5` UTR Nc73EF + chr3L_10_16950001 chr3L_16950001 RAL-796 986 chr3L 16945750 16945760 chr3L 16954884 16954913 roo 5 9140 3.5 1.5 2.5 1.4 9163 chr3L 16945750 exon Obp73a + chr3L 16950332 intergenic not near genes chr3L 16954913 5` UTR Nc73EF + chr3L_5_16950001 chr3L_16950001 RAL-796 987 chr3L 17032459 17032469 chr3L 17032571 17032584 7 115 1.0 2.5 1.8 2.5 125 chr3L 17032459 3` UTR CR45756 - chr3L 17032522 3` UTR CR45756 - chr3L 17032584 3` UTR CR45756 - chr3L_7_17030001 chr3L_17030001 RAL-796 988 chr3L 17032470 17032485 chr3L 17032565 17032601 8 110 0.5 2.5 1.5 3.2 131 chr3L 17032470 3` UTR CR45756 - chr3L 17032536 3` UTR CR45756 - chr3L 17032601 3` UTR CR45756 - chr3L_8_17030001 chr3L_17030001 RAL-796 989 chr3L 17085003 17085034 chr3L 17094152 17094183 roo 9 9149 1.5 5.5 3.5 2.0 9180 chr3L 17085003 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094183 intron Rbp6 - chr3L_9_17085001 chr3L_17085001 RAL-796 990 chr3L 17120653 17120684 chr3L 17120729 17120760 8 76 3.0 2.5 2.8 2.1 107 chr3L 17120653 intron Rbp6 - chr3L 17120706 intron Rbp6 - chr3L 17120760 intron Rbp6 - chr3L_8_17120001 chr3L_17120001 RAL-796 991 chr3L 17475913 17475946 chr3L 17475990 17476023 7 77 2.0 2.0 2.0 2.3 110 chr3L 17475913 3` UTR CG7580 + chr3L 17475968 3` UTR CG7580 + chr3L 17476023 3` UTR CG7580 + chr3L_7_17475001 chr3L_17475001 RAL-796 992 chr3L 17516978 17517013 chr3L 17524536 17524571 412 8 7558 3.0 3.5 3.2 1.9 7593 chr3L 17516978 intron CG7564 + chr3L 17520774 intron CG7564 + chr3L 17524571 3` UTR CG7564 + chr3L_8_17520001 chr3L_17520001 RAL-796 993 chr3L 17580585 17580609 chr3L 17580761 17580785 15 175 4.0 0.0 2.0 5.0 200 chr3L 17580585 intron Eip74EF - chr3L 17580685 intron Eip74EF - chr3L 17580785 intron Eip74EF - chr3L_15_17580001 chr3L_17580001 RAL-796 994 chr3L 17585329 17585348 chr3L 17585655 17585674 5 326 4.0 13.0 8.5 0.5 345 chr3L 17585329 intron Eip74EF - chr3L 17585502 intron Eip74EF - chr3L 17585674 intron Eip74EF - chr3L_5_17585001 chr3L_17585001 RAL-796 995 chr3L 17592790 17592818 chr3L 17592881 17592909 5 91 1.5 4.0 2.8 1.3 119 chr3L 17592790 intron Eip74EF - chr3L 17592850 intron Eip74EF - chr3L 17592909 intron Eip74EF - chr3L_5_17590001 chr3L_17590001 RAL-796 996 chr3L 17730858 17730884 chr3L 17738187 17738214 mdg1 4 7330 1.0 2.5 1.8 1.4 7356 chr3L 17730858 intron Ccn + chr3L 17734536 intron Ccn + chr3L 17738214 intron Ccn + chr3L_4_17730001 chr3L_17730001 RAL-796 997 chr3L 17789843 17789870 chr3L 17789919 17789946 5 76 1.0 2.5 1.8 1.8 103 chr3L 17789843 intergenic not near genes chr3L 17789894 intergenic not near genes chr3L 17789946 intergenic not near genes chr3L_5_17785001 chr3L_17785001 RAL-796 998 chr3L 18047710 18047723 chr3L 18056766 18056779 roo 4 9056 1.5 1.5 1.5 1.6 9069 chr3L 18047710 intron Eip75B - chr3L 18052244 intron Eip75B - chr3L 18056779 intron Eip75B - chr3L_4_18050001 chr3L_18050001 RAL-796 999 chr3L 18106274 18106285 chr3L 18106393 18106404 4 119 1.5 0.0 0.8 2.2 130 chr3L 18106274 intergenic CG13698 -,mRpS26 + chr3L 18106339 intergenic CG13698 -,mRpS26 + chr3L 18106404 intergenic mRpS26 +,CG13698 - chr3L_4_18105001 chr3L_18105001 RAL-796 1000 chr3L 18119662 18119679 chr3L 18119760 18119777 5 98 0.0 3.0 1.5 2.0 115 chr3L 18119662 intron CG7341 + chr3L 18119720 intron CG7341 + chr3L 18119777 intron CG7341 + chr3L_5_18115001 chr3L_18115001 RAL-796 1001 chr3L 18150320 18150342 chr3L 18150417 18150439 5 97 1.5 2.0 1.8 1.8 119 chr3L 18150320 intron CG7330 + chr3L 18150380 intron CG7330 + chr3L 18150439 intron CG7330 + chr3L_5_18150001 chr3L_18150001 RAL-796 1002 chr3L 18171865 18171880 chr3L 18171956 18171971 9 91 5.0 0.0 2.5 2.6 106 chr3L 18171865 intron W - chr3L 18171918 intron W - chr3L 18171971 intron W - chr3L_9_18170001 chr3L_18170001 RAL-796 1003 chr3L 18173946 18173979 chr3L 18174028 18174063 7 83 1.5 2.5 2.0 2.3 117 chr3L 18173946 intron W - chr3L 18174004 intron W - chr3L 18174063 intron W - chr3L_7_18170001 chr3L_18170001 RAL-796 1004 chr3L 18217997 18218005 chr3L 18218586 18218617 5 604 2.0 4.0 3.0 1.2 620 chr3L 18217997 intergenic not near genes chr3L 18218307 intergenic not near genes chr3L 18218617 intergenic not near genes chr3L_5_18215001 chr3L_18215001 RAL-796 1005 chr3L 18283931 18283964 chr3L 18284007 18284041 5 77 0.5 1.5 1.0 2.5 110 chr3L 18283931 intergenic not near genes chr3L 18283986 intergenic not near genes chr3L 18284041 intergenic not near genes chr3L_5_18280001 chr3L_18280001 RAL-796 1006 chr3L 18339407 18339424 chr3L 18339484 18339502 4 78 1.0 2.0 1.5 1.6 95 chr3L 18339407 intergenic not near genes chr3L 18339454 intergenic not near genes chr3L 18339502 intergenic not near genes chr3L_4_18335001 chr3L_18335001 RAL-796 1007 chr3L 18359596 18359628 chr3L 18359688 18359719 6 92 5.0 2.0 3.5 1.3 123 chr3L 18359596 intergenic not near genes chr3L 18359658 intergenic not near genes chr3L 18359719 intergenic not near genes chr3L_6_18355001 chr3L_18355001 RAL-796 1008 chr3L 18376087 18376106 chr3L 18376176 18376195 4 91 1.5 0.0 0.8 2.2 108 chr3L 18376087 intergenic not near genes chr3L 18376141 intergenic not near genes chr3L 18376195 intergenic not near genes chr3L_4_18375001 chr3L_18375001 RAL-796 1009 chr3L 18408739 18408756 chr3L 18408825 18408842 6 86 2.0 2.0 2.0 2.0 103 chr3L 18408739 intergenic not near genes chr3L 18408790 intergenic not near genes chr3L 18408842 intergenic not near genes chr3L_6_18405001 chr3L_18405001 RAL-796 1010 chr3L 18456273 18456302 chr3L 18456361 18456390 7 88 1.0 2.0 1.5 2.8 117 chr3L 18456273 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456390 intergenic CR44670 - chr3L_7_18455001 chr3L_18455001 RAL-796 1011 chr3L 18484675 18484694 chr3L 18488644 18488663 6 3971 21.0 22.0 21.5 0.3 3988 chr3L 18484675 intergenic AstC-R2 - chr3L 18486669 3` UTR AstC-R2 - chr3L 18488663 exon AstC-R2 - chr3L_6_18485001 chr3L_18485001 RAL-796 1012 chr3L 18564291 18564301 chr3L 18564371 18564381 4 80 3.5 0.5 2.0 1.3 90 chr3L 18564291 intron AstC-R1 + chr3L 18564336 intron AstC-R1 + chr3L 18564381 intron AstC-R1 + chr3L_4_18560001 chr3L_18560001 RAL-796 1013 chr3L 18567039 18567050 chr3L 18567125 18567136 5 85 4.5 1.5 3.0 1.2 97 chr3L 18567039 intron AstC-R1 + chr3L 18567088 intron AstC-R1 + chr3L 18567136 intron AstC-R1 + chr3L_5_18565001 chr3L_18565001 RAL-796 1014 chr3L 18593945 18593981 chr3L 18595925 18595961 Doc 4 1980 1.5 0.0 0.8 2.2 2016 chr3L 18593945 intergenic term - chr3L 18594953 intergenic not near genes chr3L 18595961 intergenic CR45389 + chr3L_4_18590001 chr3L_18590001 RAL-796 1015 chr3L 18638574 18638606 chr3L 18638668 18638700 11 94 0.5 0.0 0.2 9.2 126 chr3L 18638574 intron MYPT-75D + chr3L 18638637 intron MYPT-75D + chr3L 18638700 intron MYPT-75D + chr3L_11_18635001 chr3L_18635001 RAL-796 1016 chr3L 18656185 18656218 chr3L 18656270 18656302 15 84 2.0 3.5 2.8 3.9 117 chr3L 18656185 intron MYPT-75D + chr3L 18656244 intron MYPT-75D + chr3L 18656302 intron MYPT-75D + chr3L_15_18655001 chr3L_18655001 RAL-796 1017 chr3L 18679382 18679398 chr3L 18689136 18689153 9 9754 18.5 27.5 23.0 0.4 9771 chr3L 18679382 intergenic not near genes chr3L 18684268 3` UTR Cyp12c1 - chr3L 18689153 intergenic not near genes chr3L_9_18680001 chr3L_18680001 RAL-796 1018 chr3L 18706455 18706472 chr3L 18706755 18706772 4 298 1.5 4.0 2.8 1.1 317 chr3L 18706455 intergenic not near genes chr3L 18706614 intergenic not near genes chr3L 18706772 intergenic not near genes chr3L_4_18705001 chr3L_18705001 RAL-796 1019 chr3L 18706476 18706485 chr3L 18706754 18706785 4 291 1.0 4.0 2.5 1.1 309 chr3L 18706476 intergenic not near genes chr3L 18706630 intergenic not near genes chr3L 18706785 intergenic not near genes chr3L_4_18705001 chr3L_18705001 RAL-796 1020 chr3L 18721773 18721804 chr3L 18721863 18721895 10 91 2.0 1.0 1.5 4.0 122 chr3L 18721773 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721895 3` UTR CG12477 - chr3L_10_18720001 chr3L_18720001 RAL-796 1021 chr3L 18725269 18725297 chr3L 18725575 18725603 7 304 1.0 1.5 1.2 3.2 334 chr3L 18725269 intergenic not near genes chr3L 18725436 intergenic not near genes chr3L 18725603 intergenic not near genes chr3L_7_18725001 chr3L_18725001 RAL-796 1022 chr3L 18738663 18738695 chr3L 18738751 18738783 7 88 1.5 1.5 1.5 2.8 120 chr3L 18738663 intergenic not near genes chr3L 18738723 intergenic not near genes chr3L 18738783 intergenic not near genes chr3L_7_18735001 chr3L_18735001 RAL-796 1023 chr3L 18770653 18770676 chr3L 18770738 18770761 4 85 1.0 2.0 1.5 1.6 108 chr3L 18770653 intron ftz-f1 - chr3L 18770707 intron ftz-f1 - chr3L 18770761 intron ftz-f1 - chr3L_4_18770001 chr3L_18770001 RAL-796 1024 chr3L 18772415 18772439 chr3L 18781096 18781120 roo 11 8681 2.5 3.5 3.0 2.8 8705 chr3L 18772415 intron ftz-f1 - chr3L 18776768 intron ftz-f1 - chr3L 18781120 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 RAL-796 1025 chr3L 18797316 18797334 chr3L 18797398 18797417 4 83 0.5 2.5 1.5 1.6 101 chr3L 18797316 intron ftz-f1 - chr3L 18797366 intron ftz-f1 - chr3L 18797417 intron ftz-f1 - chr3L_4_18795001 chr3L_18795001 RAL-796 1026 chr3L 18933628 18933660 chr3L 18933722 18933753 6 94 1.0 1.0 1.0 3.0 125 chr3L 18933628 intron CG32204 - chr3L 18933690 intron CG32204 - chr3L 18933753 intron CG32204 - chr3L_6_18930001 chr3L_18930001 RAL-796 1027 chr3L 18957296 18957327 chr3L 18957377 18957407 7 80 1.0 2.5 1.8 2.5 111 chr3L 18957296 intergenic not near genes chr3L 18957352 intergenic not near genes chr3L 18957407 intergenic not near genes chr3L_7_18955001 chr3L_18955001 RAL-796 1028 chr3L 19012856 19012888 chr3L 19012941 19012973 18 84 5.5 4.0 4.8 3.1 117 chr3L 19012856 intron nkd - chr3L 19012914 intron nkd - chr3L 19012973 intron nkd - chr3L_18_19010001 chr3L_19010001 RAL-796 1029 chr3L 19082037 19082065 chr3L 19082138 19082167 11 102 1.5 4.0 2.8 2.9 130 chr3L 19082037 intron Mkp3 - chr3L 19082102 intron Mkp3 - chr3L 19082167 intron Mkp3 - chr3L_11_19080001 chr3L_19080001 RAL-796 1030 chr3L 19101718 19101721 chr3L 19102090 19102093 4 372 1.0 2.5 1.8 1.4 375 chr3L 19101718 intergenic not near genes chr3L 19101906 intergenic not near genes chr3L 19102093 intergenic not near genes chr3L_4_19100001 chr3L_19100001 RAL-796 1031 chr3L 19115638 19115667 chr3L 19115816 19115845 BS 9 177 6.5 2.5 4.5 1.6 207 chr3L 19115638 intron CG14082 - chr3L 19115742 intron CG14082 - chr3L 19115845 intron CG14082 - chr3L_9_19115001 chr3L_19115001 RAL-796 1032 chr3L 19117042 19117070 chr3L 19124488 19124517 mdg1 8 7446 3.5 2.0 2.8 2.1 7475 chr3L 19117042 intron CG14082 - chr3L 19120780 intron CG14082 - chr3L 19124517 intron CG14082 - chr3L_8_19120001 chr3L_19120001 RAL-796 1033 chr3L 19182390 19182417 chr3L 19182471 19182498 10 81 0.5 1.5 1.0 5.0 108 chr3L 19182390 intron fz2 - chr3L 19182444 intron fz2 - chr3L 19182498 intron fz2 - chr3L_10_19180001 chr3L_19180001 RAL-796 1034 chr3L 19191516 19191542 chr3L 19191599 19191625 7 83 2.0 0.5 1.2 3.2 109 chr3L 19191516 intron fz2 - chr3L 19191570 intron fz2 - chr3L 19191625 intron fz2 - chr3L_7_19190001 chr3L_19190001 RAL-796 1035 chr3L 19208056 19208090 chr3L 19209430 19209464 Doc 6 1374 1.0 1.5 1.2 2.7 1408 chr3L 19208056 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209464 intron fz2 - chr3L_6_19205001 chr3L_19205001 RAL-796 1036 chr3L 19210121 19210137 chr3L 19210217 19210233 5 96 0.0 3.0 1.5 2.0 112 chr3L 19210121 intron fz2 - chr3L 19210177 intron fz2 - chr3L 19210233 intron fz2 - chr3L_5_19210001 chr3L_19210001 RAL-796 1037 chr3L 19216519 19216534 chr3L 19216596 19216611 4 77 0.5 0.0 0.2 3.3 92 chr3L 19216519 intron fz2 - chr3L 19216565 intron fz2 - chr3L 19216611 intron fz2 - chr3L_4_19215001 chr3L_19215001 RAL-796 1038 chr3L 19221698 19221733 chr3L 19221809 19221844 12 111 4.5 0.5 2.5 3.4 146 chr3L 19221698 intron fz2 - chr3L 19221771 intron fz2 - chr3L 19221844 intron fz2 - chr3L_12_19220001 chr3L_19220001 RAL-796 1039 chr3L 19222377 19222397 chr3L 19222498 19222518 7 121 0.0 0.5 0.2 5.8 141 chr3L 19222377 intron fz2 - chr3L 19222448 intron fz2 - chr3L 19222518 intron fz2 - chr3L_7_19220001 chr3L_19220001 RAL-796 1040 chr3L 19263240 19263262 chr3L 19263401 19263421 11 160 3.5 2.0 2.8 2.9 181 chr3L 19263240 intron Max - chr3L 19263330 intron Max - chr3L 19263421 exon Max - chr3L_11_19260001 chr3L_19260001 RAL-796 1041 chr3L 19325406 19325435 chr3L 19325480 19325512 8 75 1.0 6.5 3.8 1.7 106 chr3L 19325406 intron pip - chr3L 19325459 intron pip - chr3L 19325512 intron pip - chr3L_8_19325001 chr3L_19325001 RAL-796 1042 chr3L 19335743 19335775 chr3L 19335829 19335862 10 87 4.5 4.5 4.5 1.8 119 chr3L 19335743 intron pip - chr3L 19335802 intron pip - chr3L 19335862 intron pip - chr3L_10_19335001 chr3L_19335001 RAL-796 1043 chr3L 19342761 19342774 chr3L 19342852 19342865 6 91 1.5 1.0 1.2 2.7 104 chr3L 19342761 3` UTR CG32206 - chr3L 19342813 3` UTR CG32206 - chr3L 19342865 3` UTR CG32206 - chr3L_6_19340001 chr3L_19340001 RAL-796 1044 chr3L 19382450 19382476 chr3L 19382832 19382857 4 382 2.0 0.5 1.2 1.8 407 chr3L 19382450 intron CG32206 - chr3L 19382654 intron CG32206 - chr3L 19382857 intron CG32206 - chr3L_4_19380001 chr3L_19380001 RAL-796 1045 chr3L 19427460 19427483 chr3L 19427552 19427577 7 93 2.0 1.5 1.8 2.5 117 chr3L 19427460 intergenic not near genes chr3L 19427518 intergenic not near genes chr3L 19427577 intergenic not near genes chr3L_7_19425001 chr3L_19425001 RAL-796 1046 chr3L 19429462 19429492 chr3L 19429551 19429582 10 88 3.0 1.5 2.2 3.1 120 chr3L 19429462 intergenic not near genes chr3L 19429522 intergenic not near genes chr3L 19429582 intergenic not near genes chr3L_10_19425001 chr3L_19425001 RAL-796 1047 chr3L 19527925 19527957 chr3L 19528004 19528035 8 79 2.5 2.0 2.2 2.5 110 chr3L 19527925 intergenic not near genes chr3L 19527980 intergenic not near genes chr3L 19528035 intergenic not near genes chr3L_8_19525001 chr3L_19525001 RAL-796 1048 chr3L 19618065 19618097 chr3L 19618185 19618217 12 120 1.0 3.5 2.2 3.8 152 chr3L 19618065 intron l(3)76BDm - chr3L 19618141 intron l(3)76BDm - chr3L 19618217 intron l(3)76BDm - chr3L_12_19615001 chr3L_19615001 RAL-796 1049 chr3L 19703842 19703870 chr3L 19703996 19704024 6 154 5.0 3.0 4.0 1.2 182 chr3L 19703842 intron serp - chr3L 19703933 intron serp - chr3L 19704024 intron serp - chr3L_6_19700001 chr3L_19700001 RAL-796 1050 chr3L 19779525 19779548 chr3L 19779619 19779641 6 94 2.5 3.0 2.8 1.6 116 chr3L 19779525 intron,intron CG42637 -,Gyc76C - chr3L 19779583 intron,intron CG42637 -,Gyc76C - chr3L 19779641 intron,intron CG42637 -,Gyc76C - chr3L_6_19775001 chr3L_19775001 RAL-796 1051 chr3L 19848505 19848530 chr3L 19857694 19857720 roo 8 9189 2.0 5.0 3.5 1.8 9215 chr3L 19848505 intron Papss + chr3L 19853112 intron Papss + chr3L 19857720 intron Papss + chr3L_8_19850001 chr3L_19850001 RAL-796 1052 chr3L 19861824 19861853 chr3L 19863611 19863641 S-element 12 1788 3.5 2.5 3.0 3.0 1817 chr3L 19861824 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863641 intergenic not near genes chr3L_12_19860001 chr3L_19860001 RAL-796 1053 chr3L 19933536 19933559 chr3L 19934358 19934381 7 822 3.0 1.5 2.2 2.2 845 chr3L 19933536 intergenic CR45678 + chr3L 19933958 5` UTR CR45678 + chr3L 19934381 intergenic CR45678 + chr3L_7_19930001 chr3L_19930001 RAL-796 1054 chr3L 19981204 19981234 chr3L 19981283 19981314 7 80 2.0 1.0 1.5 2.8 110 chr3L 19981204 intergenic CG17732 + chr3L 19981259 intergenic CG17732 + chr3L 19981314 intergenic CG17732 + chr3L_7_19980001 chr3L_19980001 RAL-796 1055 chr3L 20036565 20036584 chr3L 20036723 20036737 5 158 1.5 3.5 2.5 1.4 172 chr3L 20036565 intergenic not near genes chr3L 20036651 intergenic not near genes chr3L 20036737 intergenic not near genes chr3L_5_20035001 chr3L_20035001 RAL-796 1056 chr3L 20086791 20086820 chr3L 20086869 20086898 6 78 0.5 3.0 1.8 2.1 107 chr3L 20086791 intron sNPF-R - chr3L 20086844 intron sNPF-R - chr3L 20086898 intron sNPF-R - chr3L_6_20085001 chr3L_20085001 RAL-796 1057 chr3L 20143087 20143114 chr3L 20143167 20143194 10 80 4.0 2.5 3.2 2.4 107 chr3L 20143087 intergenic not near genes chr3L 20143140 intergenic not near genes chr3L 20143194 intergenic not near genes chr3L_10_20140001 chr3L_20140001 RAL-796 1058 chr3L 20148287 20148318 chr3L 20148377 20148408 8 90 1.5 4.0 2.8 2.1 121 chr3L 20148287 intergenic not near genes chr3L 20148348 intergenic not near genes chr3L 20148408 intergenic not near genes chr3L_8_20145001 chr3L_20145001 RAL-796 1059 chr3L 20156164 20156193 chr3L 20156286 20156315 10 122 3.5 1.5 2.5 2.9 151 chr3L 20156164 intron CG42674 - chr3L 20156240 intron CG42674 - chr3L 20156315 intron CG42674 - chr3L_10_20155001 chr3L_20155001 RAL-796 1060 chr3L 20197909 20197938 chr3L 20197993 20198023 6 84 3.0 2.0 2.5 1.7 114 chr3L 20197909 5` UTR CG42674 - chr3L 20197966 5` UTR CG42674 - chr3L 20198023 5` UTR CG42674 - chr3L_6_20195001 chr3L_20195001 RAL-796 1061 chr3L 20386938 20386970 chr3L 20387040 20387072 8 102 2.5 3.0 2.8 2.1 134 chr3L 20386938 intron fbl + chr3L 20387005 intron fbl + chr3L 20387072 intron fbl + chr3L_8_20385001 chr3L_20385001 RAL-796 1062 chr3L 20451285 20451301 chr3L 20451526 20451542 5 241 3.0 1.5 2.2 1.6 257 chr3L 20451285 intron CG5199 - chr3L 20451414 intron CG5199 - chr3L 20451542 intron CG5199 - chr3L_5_20450001 chr3L_20450001 RAL-796 1063 chr3L 20476752 20476785 chr3L 20484351 20484384 springer 9 7599 3.5 4.0 3.8 1.9 7632 chr3L 20476752 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484384 3` UTR ZnT77C - chr3L_9_20480001 chr3L_20480001 RAL-796 1064 chr3L 20703703 20703726 chr3L 20707086 20707109 6 3383 17.5 9.5 13.5 0.4 3406 chr3L 20703703 intergenic not near genes chr3L 20705406 intergenic not near genes chr3L 20707109 intergenic not near genes chr3L_6_20705001 chr3L_20705001 RAL-796 1065 chr3L 20741019 20741055 chr3L 20741107 20741143 5 88 0.5 0.5 0.5 3.3 124 chr3L 20741019 intron CG13252 + chr3L 20741081 intron CG13252 + chr3L 20741143 intron CG13252 + chr3L_5_20740001 chr3L_20740001 RAL-796 1066 chr3L 20752622 20752641 chr3L 20755534 20755553 4 2912 1.0 1.0 1.0 2.0 2931 chr3L 20752622 intergenic not near genes chr3L 20754088 intergenic not near genes chr3L 20755553 exon CG33912 - chr3L_4_20750001 chr3L_20750001 RAL-796 1067 chr3L 20896921 20896936 chr3L 20897000 20897012 4 78 6.0 0.0 3.0 1.0 91 chr3L 20896921 3` UTR Sfp77F - chr3L 20896966 3` UTR Sfp77F - chr3L 20897012 3` UTR Sfp77F - chr3L_4_20895001 chr3L_20895001 RAL-796 1068 chr3L 20986757 20986780 chr3L 20986835 20986858 5 78 2.5 1.5 2.0 1.7 101 chr3L 20986757 intergenic not near genes chr3L 20986808 intergenic not near genes chr3L 20986858 intergenic not near genes chr3L_5_20985001 chr3L_20985001 RAL-796 1069 chr3L 21014923 21014947 chr3L 21023403 21023427 Tirant 7 8478 6.0 2.0 4.0 1.4 8504 chr3L 21014923 intron skd - chr3L 21019175 intron skd - chr3L 21023427 intron skd - chr3L_7_21015001 chr3L_21015001 RAL-796 1070 chr3L 21082218 21082240 chr3L 21082296 21082318 10 76 0.5 4.0 2.2 3.1 100 chr3L 21082218 intron ko - chr3L 21082268 intron ko - chr3L 21082318 intron ko - chr3L_10_21080001 chr3L_21080001 RAL-796 1071 chr3L 21151865 21151893 chr3L 21156949 21156977 flea 4 5084 4.5 0.5 2.5 1.1 5112 chr3L 21151865 intron Ac78C - chr3L 21154421 intron Ac78C - chr3L 21156977 intron Ac78C - chr3L_4_21150001 chr3L_21150001 RAL-796 1072 chr3L 21160962 21160994 chr3L 21161058 21161090 5 96 1.0 2.5 1.8 1.8 128 chr3L 21160962 5` UTR Ac78C - chr3L 21161026 intron Ac78C - chr3L 21161090 intron Ac78C - chr3L_5_21160001 chr3L_21160001 RAL-796 1073 chr3L 21161431 21161459 chr3L 21161509 21161538 9 79 1.5 4.0 2.8 2.4 107 chr3L 21161431 intron Ac78C - chr3L 21161484 intron Ac78C - chr3L 21161538 intron Ac78C - chr3L_9_21160001 chr3L_21160001 RAL-796 1074 chr3L 21243753 21243769 chr3L 21251314 21251329 412 4 7561 0.5 3.0 1.8 1.4 7576 chr3L 21243753 intron Eip78C + chr3L 21247541 intron Eip78C + chr3L 21251329 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-796 1075 chr3L 21274203 21274225 chr3L 21274374 21274396 5 171 1.5 2.5 2.0 1.7 193 chr3L 21274203 intron AcCoAS - chr3L 21274300 intron AcCoAS - chr3L 21274396 intron AcCoAS - chr3L_5_21270001 chr3L_21270001 RAL-796 1076 chr3L 21306147 21306181 chr3L 21315306 21315340 roo 8 9158 0.5 1.5 1.0 4.0 9193 chr3L 21306147 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310744 intron Pc - chr3L 21315340 3` UTR Pc - chr3L_8_21310001 chr3L_21310001 RAL-796 1077 chr3L 21319533 21319558 chr3L 21319623 21319648 8 90 0.5 4.0 2.2 2.5 115 chr3L 21319533 5` UTR Rab26 + chr3L 21319590 5` UTR Rab26 + chr3L 21319648 5` UTR Rab26 + chr3L_8_21315001 chr3L_21315001 RAL-796 1078 chr3L 21361729 21361750 chr3L 21362682 21362704 G2 9 954 2.5 3.5 3.0 2.2 975 chr3L 21361729 intergenic CG32440 + chr3L 21362216 intergenic not near genes chr3L 21362704 intergenic not near genes chr3L_9_21360001 chr3L_21360001 RAL-796 1079 chr3L 21362851 21362883 chr3L 21362935 21362967 12 84 1.5 2.5 2.0 4.0 116 chr3L 21362851 intergenic not near genes chr3L 21362909 intergenic not near genes chr3L 21362967 intergenic not near genes chr3L_12_21360001 chr3L_21360001 RAL-796 1080 chr3L 21498851 21498864 chr3L 21500485 21500499 1360 5 1635 2.5 7.5 5.0 0.8 1648 chr3L 21498851 intron Glg1 - chr3L 21499675 intron Glg1 - chr3L 21500499 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-796 1081 chr3L 21637324 21637356 chr3L 21637411 21637443 10 85 3.5 2.5 3.0 2.5 119 chr3L 21637324 intron CG32444 + chr3L 21637384 intron CG32444 + chr3L 21637443 intron CG32444 + chr3L_10_21635001 chr3L_21635001 RAL-796 1082 chr3L 21671058 21671089 chr3L 21671206 21671237 16 148 1.5 2.5 2.0 5.3 179 chr3L 21671058 intergenic not near genes chr3L 21671148 intergenic not near genes chr3L 21671237 intergenic not near genes chr3L_16_21670001 chr3L_21670001 RAL-796 1083 chr3L 21736349 21736372 chr3L 21736550 21736573 5 201 0.5 3.0 1.8 1.8 224 chr3L 21736349 intergenic CR43888 + chr3L 21736461 intergenic CR43888 + chr3L 21736573 intergenic CR43888 + chr3L_5_21735001 chr3L_21735001 RAL-796 1084 chr3L 21749320 21749348 chr3L 21754480 21754481 Doc 6 5155 2.0 4.0 3.0 1.5 5161 chr3L 21749320 intron Syn1 - chr3L 21751900 intron Syn1 - chr3L 21754481 intron Syn1 - chr3L_6_21750001 chr3L_21750001 RAL-796 1085 chr3L 21798761 21798773 chr3L 21798850 21798862 7 88 3.5 2.5 3.0 1.8 101 chr3L 21798761 intergenic not near genes chr3L 21798812 intergenic not near genes chr3L 21798862 intergenic not near genes chr3L_7_21795001 chr3L_21795001 RAL-796 1086 chr3L 21799848 21799864 chr3L 21799936 21799952 6 88 3.0 4.5 3.8 1.2 104 chr3L 21799848 intergenic not near genes chr3L 21799900 intergenic not near genes chr3L 21799952 intergenic not near genes chr3L_6_21795001 chr3L_21795001 RAL-796 1087 chr3L 21975679 21975710 chr3L 21975913 21975944 6 234 1.0 1.0 1.0 3.0 265 chr3L 21975679 intron CG7470 + chr3L 21975812 intron CG7470 + chr3L 21975944 intron CG7470 + chr3L_6_21975001 chr3L_21975001 RAL-796 1088 chr3L 22033695 22033721 chr3L 22033772 22033799 12 78 1.5 3.5 2.5 3.4 104 chr3L 22033695 intergenic not near genes chr3L 22033747 intergenic not near genes chr3L 22033799 intergenic not near genes chr3L_12_22030001 chr3L_22030001 RAL-796 1089 chr3L 22099693 22099704 chr3L 22105879 22105888 3S18 4 6186 1.5 2.5 2.0 1.3 6195 chr3L 22099693 intergenic not near genes chr3L 22102790 intergenic not near genes chr3L 22105888 intergenic not near genes chr3L_4_22100001 chr3L_22100001 RAL-796 1090 chr3L 22351052 22351079 chr3L 22352034 22352061 7 982 2.0 7.5 4.8 1.2 1009 chr3L 22351052 intron Ten-m - chr3L 22351556 intron Ten-m - chr3L 22352061 intron Ten-m - chr3L_7_22350001 chr3L_22350001 RAL-796 1091 chr3L 22355591 22355623 chr3L 22355672 22355704 8 81 2.0 2.5 2.2 2.5 113 chr3L 22355591 intron Ten-m - chr3L 22355648 intron Ten-m - chr3L 22355704 intron Ten-m - chr3L_8_22355001 chr3L_22355001 RAL-796 1092 chr3L 22361942 22361964 chr3L 22362017 22362041 6 77 4.5 4.0 4.2 1.2 99 chr3L 22361942 intron Ten-m - chr3L 22361992 intron Ten-m - chr3L 22362041 intron Ten-m - chr3L_6_22360001 chr3L_22360001 RAL-796 1093 chr3L 22413872 22413902 chr3L 22413956 22413986 7 84 2.0 2.5 2.2 2.2 114 chr3L 22413872 intergenic not near genes chr3L 22413929 intergenic not near genes chr3L 22413986 intergenic not near genes chr3L_7_22410001 chr3L_22410001 RAL-796 1094 chr3L 22507121 22507154 chr3L 22507208 22507238 6 79 2.5 2.5 2.5 1.7 117 chr3L 22507121 intergenic not near genes chr3L 22507180 intergenic not near genes chr3L 22507238 intergenic not near genes chr3L_6_22505001 chr3L_22505001 RAL-796 1095 chr3L 22522706 22522729 chr3L 22522782 22522806 5 77 2.0 4.0 3.0 1.2 100 chr3L 22522706 intergenic not near genes chr3L 22522756 intergenic not near genes chr3L 22522806 intergenic not near genes chr3L_5_22520001 chr3L_22520001 RAL-796 1096 chr3L 22544404 22544419 chr3L 22544479 22544496 8 76 3.0 4.0 3.5 1.8 92 chr3L 22544404 intergenic not near genes chr3L 22544450 intergenic not near genes chr3L 22544496 intergenic not near genes chr3L_8_22540001 chr3L_22540001 RAL-796 1097 chr3L 22554427 22554456 chr3L 22554502 22554532 7 76 5.5 3.0 4.2 1.3 105 chr3L 22554427 intergenic not near genes chr3L 22554480 intergenic not near genes chr3L 22554532 intergenic not near genes chr3L_7_22550001 chr3L_22550001 RAL-796 1098 chr3L 22555778 22555791 chr3L 22563248 22563261 blood 4 7470 4.0 1.0 2.5 1.1 7483 chr3L 22555778 intergenic not near genes chr3L 22559520 intergenic not near genes chr3L 22563261 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-796 1099 chr3L 22555792 22555801 chr3L 22563242 22563266 blood 5 7465 3.0 1.0 2.0 1.7 7474 chr3L 22555792 intergenic not near genes chr3L 22559529 intergenic not near genes chr3L 22563266 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-796 1100 chr3L 22569577 22569601 chr3L 22569675 22569699 7 96 2.5 2.0 2.2 2.2 122 chr3L 22569577 intergenic not near genes chr3L 22569638 intergenic not near genes chr3L 22569699 intergenic not near genes chr3L_7_22565001 chr3L_22565001 RAL-796 1101 chr3L 22577630 22577647 chr3L 22582418 22582435 Doc 4 4788 2.5 5.0 3.8 0.8 4805 chr3L 22577630 intergenic not near genes chr3L 22580032 intergenic not near genes chr3L 22582435 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 RAL-796 1102 chr3L 22617194 22617222 chr3L 22624646 22624674 blood 4 7451 1.5 2.0 1.8 1.4 7480 chr3L 22617194 intron CG14459 - chr3L 22620934 intron CG14459 - chr3L 22624674 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-796 1103 chr3L 22630737 22630770 chr3L 22630816 22630849 12 77 2.5 1.5 2.0 4.0 112 chr3L 22630737 intron CG14459 - chr3L 22630793 intron CG14459 - chr3L 22630849 intron CG14459 - chr3L_12_22630001 chr3L_22630001 RAL-796 1104 chr3L 22652322 22652352 chr3L 22652460 22652490 14 138 4.0 2.0 3.0 3.5 168 chr3L 22652322 exon CG33772 - chr3L 22652406 intron CG33772 - chr3L 22652490 exon CG33772 - chr3L_14_22650001 chr3L_22650001 RAL-796 1105 chr3L 22761391 22761416 chr3L 22766825 22766849 Ivk 6 5434 3.5 2.0 2.8 1.6 5458 chr3L 22761391 intron SPoCk + chr3L 22764120 intron SPoCk + chr3L 22766849 intron SPoCk + chr3L_6_22760001 chr3L_22760001 RAL-796 1106 chr3L 22848708 22848742 chr3L 22848798 22848832 6 90 2.0 4.0 3.0 1.5 124 chr3L 22848708 intergenic not near genes chr3L 22848770 intergenic not near genes chr3L 22848832 intergenic not near genes chr3L_6_22845001 chr3L_22845001 RAL-796 1107 chr3L 22865983 22866013 chr3L 22867116 22867146 Doc 12 1133 4.0 3.5 3.8 2.5 1163 chr3L 22865983 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867146 intron CG33170 + chr3L_12_22865001 chr3L_22865001 RAL-796 1108 chr3L 22885917 22885946 chr3L 22885992 22886023 9 76 1.0 4.0 2.5 2.6 106 chr3L 22885917 intron slif + chr3L 22885970 intron slif + chr3L 22886023 intron slif + chr3L_9_22885001 chr3L_22885001 RAL-796 1109 chr3L 19220633 19220637 chr3L 22908066 22908066 4 3687430 17.5 8.5 13.0 0.3 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-796 1110 chr3L 22912764 22912797 chr3L 22912845 22912878 8 81 1.5 2.0 1.8 2.9 114 chr3L 22912764 intron CG12768 + chr3L 22912821 intron CG12768 + chr3L 22912878 intron CG12768 + chr3L_8_22910001 chr3L_22910001 RAL-796 1111 chr3L 22920935 22920949 chr3L 22921023 22921037 6 86 2.5 1.0 1.8 2.1 102 chr3L 22920935 intron CG12768 + chr3L 22920986 intron CG12768 + chr3L 22921037 intron CG12768 + chr3L_6_22920001 chr3L_22920001 RAL-796 1112 chr3L 22943717 22943744 chr3L 22943923 22943950 13 206 1.0 3.5 2.2 4.1 233 chr3L 22943717 intergenic not near genes chr3L 22943834 intergenic not near genes chr3L 22943950 intergenic not near genes chr3L_13_22940001 chr3L_22940001 RAL-796 1113 chr3L 22974366 22974395 chr3L 22974445 22974472 13 77 4.0 4.5 4.2 2.5 106 chr3L 22974366 intergenic not near genes chr3L 22974419 intergenic not near genes chr3L 22974472 intergenic not near genes chr3L_13_22970001 chr3L_22970001 RAL-796 1114 chr3L 22975630 22975662 chr3L 22975711 22975744 17 81 3.0 2.5 2.8 4.5 114 chr3L 22975630 intergenic not near genes chr3L 22975687 intergenic not near genes chr3L 22975744 intergenic not near genes chr3L_17_22975001 chr3L_22975001 RAL-796 1115 chr3L 22989865 22989885 chr3L 22996837 22996859 297 11 6974 3.0 2.5 2.8 2.9 6994 chr3L 22989865 intergenic not near genes chr3L 22993362 intergenic not near genes chr3L 22996859 intergenic not near genes chr3L_11_22990001 chr3L_22990001 RAL-796 1116 chr3L 23018500 23018527 chr3L 23018812 23018839 7 312 5.0 2.0 3.5 1.6 339 chr3L 23018500 intron nrm + chr3L 23018670 intron nrm + chr3L 23018839 intron nrm + chr3L_7_23015001 chr3L_23015001 RAL-796 1117 chr3L 23042231 23042258 chr3L 23048982 23049011 gypsy6 6 6752 4.0 2.5 3.2 1.4 6780 chr3L 23042231 intergenic not near genes chr3L 23045621 intergenic not near genes chr3L 23049011 intergenic not near genes chr3L_6_23045001 chr3L_23045001 RAL-796 1118 chr3L 23182817 23182853 chr3L 23182893 23182929 5 76 0.0 1.5 0.8 2.8 112 chr3L 23182817 intron CG34031 + chr3L 23182873 intron CG34031 + chr3L 23182929 intron CG34031 + chr3L_5_23180001 chr3L_23180001 RAL-796 1119 chr3L 23253338 23253368 chr3L 23253423 23253453 8 85 2.0 3.0 2.5 2.3 115 chr3L 23253338 intron nAChRalpha4 + chr3L 23253396 intron nAChRalpha4 + chr3L 23253453 intron nAChRalpha4 + chr3L_8_23250001 chr3L_23250001 RAL-796 1120 chr3L 23428240 23428273 chr3L 23428320 23428353 16 80 4.0 4.5 4.2 3.1 113 chr3L 23428240 intergenic not near genes chr3L 23428296 intergenic not near genes chr3L 23428353 intergenic not near genes chr3L_16_23425001 chr3L_23425001 RAL-796 1121 chr3L 23824026 23824038 chr3L 23824439 23824451 10 413 6.0 3.5 4.8 1.7 425 chr3L 23824026 intergenic not near genes chr3L 23824238 intergenic not near genes chr3L 23824451 intergenic not near genes chr3L_10_23820001 chr3L_23820001 RAL-796 1122 chr3L 24009667 24009698 chr3L 24009849 24009880 6 182 2.0 2.0 2.0 2.0 213 chr3L 24009667 intergenic CR40053 - chr3L 24009774 intergenic CR40053 - chr3L 24009880 intergenic CR40053 - chr3L_6_24005001 chr3L_24005001 RAL-796 1123 chr3L 24012410 24012435 chr3L 24020751 24020775 roo 7 8341 1.5 1.0 1.2 3.2 8365 chr3L 24012410 intergenic not near genes chr3L 24016592 intergenic not near genes chr3L 24020775 intergenic not near genes chr3L_7_24015001 chr3L_24015001 RAL-796 1124 chr3L 24021289 24021302 chr3L 24022446 24022459 1360 4 1156 2.0 1.0 1.5 1.6 1170 chr3L 24021289 intergenic not near genes chr3L 24021874 intergenic not near genes chr3L 24022459 intergenic not near genes chr3L_4_24020001 chr3L_24020001 RAL-796 1125 chr3L 24168791 24168814 chr3L 24176118 24176120 ZAM 7 7322 3.0 5.0 4.0 1.4 7329 chr3L 24168791 intron Snap25 + chr3L 24172456 intron Snap25 + chr3L 24176120 intron Snap25 + chr3L_7_24170001 chr3L_24170001 RAL-796 1126 chr3L 25464028 25464099 chr3L 25464107 25464197 4 87 4.5 3.0 3.8 0.8 169 chr3L 25464028 intergenic not near genes chr3L 25464112 intergenic not near genes chr3L 25464197 intergenic not near genes chr3L_4_25460001 chr3L_25460001 RAL-796 1127 chr3L 25513578 25513602 chr3L 25513656 25513681 10 79 3.5 5.0 4.2 1.9 103 chr3L 25513578 intron CG41343 - chr3L 25513630 intron CG41343 - chr3L 25513681 intron CG41343 - chr3L_10_25510001 chr3L_25510001 RAL-796 1128 chr3L 25628499 25628524 chr3L 25633270 25633278 F-element 6 4768 2.5 0.5 1.5 2.4 4779 chr3L 25628499 intron CG41343 - chr3L 25630888 intron CG41343 - chr3L 25633278 intron CG41343 - chr3L_6_25630001 chr3L_25630001 RAL-796 1129 chr3L 25709267 25709279 chr3L 25709402 25709414 7 135 2.0 1.0 1.5 2.8 147 chr3L 25709267 intergenic CR45180 + chr3L 25709340 intergenic CR45180 + chr3L 25709414 intergenic CR45180 + chr3L_7_25705001 chr3L_25705001 RAL-796 1130 chr3L 26694925 26694958 chr3L 26695005 26695038 15 76 2.0 2.0 2.0 5.0 113 chr3L 26694925 intergenic not near genes chr3L 26694982 intergenic not near genes chr3L 26695038 intergenic not near genes chr3L_15_26690001 chr3L_26690001 RAL-796 1131 chr3L 27167947 27167979 chr3L 27168067 27168099 11 118 6.0 3.5 4.8 1.9 152 chr3L 27167947 intergenic not near genes chr3L 27168023 intergenic not near genes chr3L 27168099 intergenic not near genes chr3L_11_27165001 chr3L_27165001 RAL-796 1132 chr3L 27284251 27284281 chr3L 27284357 27284381 9 101 3.5 7.5 5.5 1.4 130 chr3L 27284251 intron Dbp80 + chr3L 27284316 intron Dbp80 + chr3L 27284381 intron Dbp80 + chr3L_9_27280001 chr3L_27280001 RAL-796 1133 chr3L 27368882 27368910 chr3L 27369427 27369455 10 543 2.0 2.0 2.0 3.3 573 chr3L 27368882 intron Dbp80 + chr3L 27369168 intron Dbp80 + chr3L 27369455 intron Dbp80 + chr3L_10_27365001 chr3L_27365001 RAL-796 1134 chr3L 27390464 27390709 chr3L 27390685 27390788 9 93 30.5 25.5 28.0 0.3 324 chr3L 27390464 intron Dbp80 + chr3L 27390626 intron Dbp80 + chr3L 27390788 intron Dbp80 + chr3L_9_27390001 chr3L_27390001 RAL-796 1135 chr3R 1021767 1021793 chr3R 1022021 1022047 7 254 26.5 14.5 20.5 0.3 280 chr3R 1021767 intergenic not near genes chr3R 1021907 intergenic not near genes chr3R 1022047 intergenic not near genes chr3R_7_1020001 chr3R_1020001 RAL-796 1136 chr3R 1443431 1443445 chr3R 1443507 1443521 5 76 3.0 1.0 2.0 1.7 90 chr3R 1443431 intron CG40155 + chr3R 1443476 intron CG40155 + chr3R 1443521 intron CG40155 + chr3R_5_1440001 chr3R_1440001 RAL-796 1137 chr3R 1521170 1521183 chr3R 1521245 1521250 8 82 6.5 5.5 6.0 1.1 80 chr3R 1521170 intergenic not near genes chr3R 1521210 intergenic not near genes chr3R 1521250 intergenic not near genes chr3R_8_1520001 chr3R_1520001 RAL-796 1138 chr3R 1953153 1953168 chr3R 1958539 1958553 Cr1a 4 5386 8.5 12.0 10.2 0.4 5400 chr3R 1953153 intergenic not near genes chr3R 1955853 intergenic not near genes chr3R 1958553 intergenic not near genes chr3R_4_1955001 chr3R_1955001 RAL-796 1139 chr3R 3178701 3178715 chr3R 3595185 3595196 6 416483 8.0 16.5 12.2 0.5 416495 chr3R 3178701 intron CG42617 - chr3R 3386948 intergenic not near genes chr3R 3595196 intergenic not near genes chr3R_6_3385001 chr3R_3385001 RAL-796 1140 chr3R 3267250 3267273 chr3R 3267431 3267454 5 182 7.5 9.5 8.5 0.5 204 chr3R 3267250 intergenic not near genes chr3R 3267352 intergenic not near genes chr3R 3267454 intergenic not near genes chr3R_5_3265001 chr3R_3265001 RAL-796 1141 chr3R 4105037 4105062 chr3R 4110241 4110266 copia 4 5204 1.5 0.5 1.0 2.0 5229 chr3R 4105037 intergenic not near genes chr3R 4107652 intergenic not near genes chr3R 4110266 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-796 1142 chr3R 4206082 4206102 chr3R 4211657 4211677 mdg3 6 5575 0.5 3.5 2.0 2.0 5595 chr3R 4206082 intron CG14636 - chr3R 4208880 intron CG14636 - chr3R 4211677 intron CG14636 - chr3R_6_4205001 chr3R_4205001 RAL-796 1143 chr3R 4408409 4408447 chr3R 4412712 4412751 Juan 11 4304 2.0 2.0 2.0 3.7 4342 chr3R 4408409 intron CG32944 - chr3R 4410580 intron CG32944 - chr3R 4412751 intron CG32944 - chr3R_11_4410001 chr3R_4410001 RAL-796 1144 chr3R 4609546 4609583 chr3R 4610710 4610747 1360 18 1164 4.0 3.0 3.5 4.0 1201 chr3R 4609546 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610747 intergenic not near genes chr3R_18_4610001 chr3R_4610001 RAL-796 1145 chr3R 4625318 4625346 chr3R 4625704 4625732 20 385 3.5 6.5 5.0 3.3 414 chr3R 4625318 intron 5-HT2A + chr3R 4625525 intron 5-HT2A + chr3R 4625732 intron 5-HT2A + chr3R_20_4625001 chr3R_4625001 RAL-796 1146 chr3R 4680711 4680729 chr3R 4680790 4680808 6 78 3.0 1.0 2.0 2.0 97 chr3R 4680711 intron CG43427 + chr3R 4680760 intron CG43427 + chr3R 4680808 5` UTR CG43427 + chr3R_6_4680001 chr3R_4680001 RAL-796 1147 chr3R 4733675 4733699 chr3R 4733799 4733823 5 122 2.0 0.0 1.0 2.5 148 chr3R 4733675 intergenic not near genes chr3R 4733749 intergenic not near genes chr3R 4733823 intergenic not near genes chr3R_5_4730001 chr3R_4730001 RAL-796 1148 chr3R 4753240 4753268 chr3R 4757543 4757571 F-element 9 4303 4.5 2.5 3.5 2.0 4331 chr3R 4753240 intron,intron atms +,CG44098 - chr3R 4755406 intron,intron atms +,CG44098 - chr3R 4757571 intron,exon atms +,CG44098 - chr3R_9_4755001 chr3R_4755001 RAL-796 1149 chr3R 4861568 4861588 chr3R 4861646 4861669 9 81 4.0 1.0 2.5 2.6 101 chr3R 4861568 intron opa + chr3R 4861618 intron opa + chr3R 4861669 intron opa + chr3R_9_4860001 chr3R_4860001 RAL-796 1150 chr3R 4905026 4905038 chr3R 4905158 4905163 5 130 6.5 2.5 4.5 0.9 137 chr3R 4905026 intergenic not near genes chr3R 4905094 intergenic not near genes chr3R 4905163 intergenic not near genes chr3R_5_4905001 chr3R_4905001 RAL-796 1151 chr3R 4922346 4922362 chr3R 4922425 4922441 9 79 3.5 4.0 3.8 1.9 95 chr3R 4922346 intron Cdep + chr3R 4922394 intron Cdep + chr3R 4922441 intron Cdep + chr3R_9_4920001 chr3R_4920001 RAL-796 1152 chr3R 4966009 4966035 chr3R 4966098 4966127 4 91 2.5 2.0 2.2 1.2 118 chr3R 4966009 intron CG1124 + chr3R 4966068 intron CG1124 + chr3R 4966127 intron CG1124 + chr3R_4_4965001 chr3R_4965001 RAL-796 1153 chr3R 4991490 4991520 chr3R 4992036 4992069 6 548 2.0 2.5 2.2 1.9 579 chr3R 4991490 intron CG2022 - chr3R 4991780 intron CG2022 - chr3R 4992069 intron CG2022 - chr3R_6_4990001 chr3R_4990001 RAL-796 1154 chr3R 5045869 5045874 chr3R 5052954 5052976 HMS-Beagle 4 7098 3.0 3.5 3.2 1.0 7107 chr3R 5045869 intron CR43635 - chr3R 5049422 intergenic not near genes chr3R 5052976 intergenic CR45588 - chr3R_4_5045001 chr3R_5045001 RAL-796 1155 chr3R 5067983 5068013 chr3R 5073498 5073529 mdg3 8 5517 3.5 4.0 3.8 1.7 5546 chr3R 5067983 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073529 intergenic not near genes chr3R_8_5070001 chr3R_5070001 RAL-796 1156 chr3R 5131340 5131365 chr3R 5131419 5131444 5 79 5.0 1.5 3.2 1.2 104 chr3R 5131340 intergenic not near genes chr3R 5131392 intergenic not near genes chr3R 5131444 intergenic not near genes chr3R_5_5130001 chr3R_5130001 RAL-796 1157 chr3R 5158146 5158174 chr3R 5158239 5158265 8 93 2.5 2.0 2.2 2.5 119 chr3R 5158146 intron dpr16 + chr3R 5158206 intron dpr16 + chr3R 5158265 intron dpr16 + chr3R_8_5155001 chr3R_5155001 RAL-796 1158 chr3R 5278087 5278116 chr3R 5278168 5278197 13 81 7.5 4.0 5.8 1.9 110 chr3R 5278087 intron mtd - chr3R 5278142 intron mtd - chr3R 5278197 intron mtd - chr3R_13_5275001 chr3R_5275001 RAL-796 1159 chr3R 5326892 5326896 chr3R 5327440 5327448 4 551 4.0 3.5 3.8 0.8 556 chr3R 5326892 intron mtd - chr3R 5327170 intron mtd - chr3R 5327448 intron mtd - chr3R_4_5325001 chr3R_5325001 RAL-796 1160 chr3R 5338404 5338431 chr3R 5343581 5343608 Rt1c 7 5176 1.5 6.0 3.8 1.5 5204 chr3R 5338404 intron mtd - chr3R 5341006 intron mtd - chr3R 5343608 intron mtd - chr3R_7_5340001 chr3R_5340001 RAL-796 1161 chr3R 5438796 5438816 chr3R 5438965 5438985 4 169 1.5 2.5 2.0 1.3 189 chr3R 5438796 intron CG14669 + chr3R 5438890 intron CG14669 + chr3R 5438985 intron CG14669 + chr3R_4_5435001 chr3R_5435001 RAL-796 1162 chr3R 5627152 5627171 chr3R 5627559 5627582 8 410 4.5 3.0 3.8 1.7 430 chr3R 5627152 intergenic not near genes chr3R 5627367 intergenic CG31551 + chr3R 5627582 intergenic CG31551 + chr3R_8_5625001 chr3R_5625001 RAL-796 1163 chr3R 5746014 5746043 chr3R 5746254 5746284 pogo 9 241 4.5 2.5 3.5 2.0 270 chr3R 5746014 3` UTR Madm + chr3R 5746149 3` UTR Madm + chr3R 5746284 3` UTR Madm + chr3R_9_5745001 chr3R_5745001 RAL-796 1164 chr3R 5772376 5772409 chr3R 5772534 5772565 9 158 1.5 2.5 2.0 3.0 189 chr3R 5772376 intron CG2082 - chr3R 5772470 intron CG2082 - chr3R 5772565 intron CG2082 - chr3R_9_5770001 chr3R_5770001 RAL-796 1165 chr3R 5809112 5809142 chr3R 5809353 5809379 pogo 13 241 3.0 3.5 3.2 3.1 267 chr3R 5809112 3` UTR CG11000 + chr3R 5809246 3` UTR CG11000 + chr3R 5809379 3` UTR CG11000 + chr3R_13_5805001 chr3R_5805001 RAL-796 1166 chr3R 5822378 5822392 chr3R 5823545 5823559 1360 6 1166 8.0 4.5 6.2 0.8 1181 chr3R 5822378 3` UTR CG2023 - chr3R 5822968 3` UTR CG2023 - chr3R 5823559 3` UTR CG2023 - chr3R_6_5820001 chr3R_5820001 RAL-796 1167 chr3R 5822394 5822411 chr3R 5823561 5823578 1360 7 1166 3.0 9.5 6.2 1.0 1184 chr3R 5822394 3` UTR CG2023 - chr3R 5822986 3` UTR CG2023 - chr3R 5823578 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 RAL-796 1168 chr3R 5840826 5840851 chr3R 5840915 5840940 12 89 2.0 7.0 4.5 2.2 114 chr3R 5840826 intergenic CG1213 + chr3R 5840883 intergenic CG1213 + chr3R 5840940 intergenic CG1213 + chr3R_12_5840001 chr3R_5840001 RAL-796 1169 chr3R 5927560 5927582 chr3R 5927800 5927822 pogo 7 240 3.0 6.5 4.8 1.2 262 chr3R 5927560 intron CG34113 - chr3R 5927691 intron CG34113 - chr3R 5927822 intron CG34113 - chr3R_7_5925001 chr3R_5925001 RAL-796 1170 chr3R 6081834 6081864 chr3R 6081929 6081959 9 95 0.5 1.0 0.8 5.0 125 chr3R 6081834 intergenic not near genes chr3R 6081896 intergenic not near genes chr3R 6081959 intergenic not near genes chr3R_9_6080001 chr3R_6080001 RAL-796 1171 chr3R 6110446 6110471 chr3R 6110630 6110655 4 184 5.5 1.0 3.2 1.0 209 chr3R 6110446 exon Obp83ef - chr3R 6110550 intron Obp83ef - chr3R 6110655 intron Obp83ef - chr3R_4_6110001 chr3R_6110001 RAL-796 1172 chr3R 6119137 6119156 chr3R 6119223 6119242 4 85 0.5 2.5 1.5 1.6 105 chr3R 6119137 intergenic not near genes chr3R 6119190 intergenic not near genes chr3R 6119242 intergenic not near genes chr3R_4_6115001 chr3R_6115001 RAL-796 1173 chr3R 6175178 6175207 chr3R 6182448 6182465 HMS-Beagle2 11 7268 0.5 1.0 0.8 6.1 7287 chr3R 6175178 intergenic Osi1 + chr3R 6178822 intron CR45194 + chr3R 6182465 intergenic CR45194 + chr3R_11_6175001 chr3R_6175001 RAL-796 1174 chr3R 6226628 6226652 chr3R 6226716 6226740 4 88 2.0 1.5 1.8 1.4 112 chr3R 6226628 intergenic not near genes chr3R 6226684 intergenic not near genes chr3R 6226740 intergenic not near genes chr3R_4_6225001 chr3R_6225001 RAL-796 1175 chr3R 6396759 6396795 chr3R 6396899 6396935 12 140 3.5 4.5 4.0 2.4 176 chr3R 6396759 intron Dmtn - chr3R 6396847 intron Dmtn - chr3R 6396935 intron Dmtn - chr3R_12_6395001 chr3R_6395001 RAL-796 1176 chr3R 6398935 6398969 chr3R 6399245 6399279 14 309 3.5 3.5 3.5 3.1 344 chr3R 6398935 intron Dmtn - chr3R 6399107 intron Dmtn - chr3R 6399279 intron Dmtn - chr3R_14_6395001 chr3R_6395001 RAL-796 1177 chr3R 6408638 6408662 chr3R 6408972 6408996 8 334 1.5 2.0 1.8 2.9 358 chr3R 6408638 intron gpp + chr3R 6408817 intron gpp + chr3R 6408996 intron,3` UTR gpp +,CR44017 - chr3R_8_6405001 chr3R_6405001 RAL-796 1178 chr3R 6428808 6428826 chr3R 6428910 6428928 5 102 0.5 1.5 1.0 2.5 120 chr3R 6428808 intron gpp + chr3R 6428868 intron gpp + chr3R 6428928 intron gpp + chr3R_5_6425001 chr3R_6425001 RAL-796 1179 chr3R 6516640 6516667 chr3R 6516760 6516787 11 119 3.5 2.5 3.0 2.8 147 chr3R 6516640 intergenic not near genes chr3R 6516714 intergenic not near genes chr3R 6516787 intergenic not near genes chr3R_11_6515001 chr3R_6515001 RAL-796 1180 chr3R 6536581 6536612 chr3R 6536658 6536689 11 74 0.5 3.5 2.0 3.7 108 chr3R 6536581 intron dpr11 - chr3R 6536635 intron dpr11 - chr3R 6536689 intron dpr11 - chr3R_11_6535001 chr3R_6535001 RAL-796 1181 chr3R 6550323 6550353 chr3R 6550404 6550434 7 81 2.0 1.0 1.5 2.8 111 chr3R 6550323 intron dpr11 - chr3R 6550378 intron dpr11 - chr3R 6550434 intron dpr11 - chr3R_7_6550001 chr3R_6550001 RAL-796 1182 chr3R 6586357 6586392 chr3R 6586452 6586487 4 95 1.0 2.0 1.5 1.6 130 chr3R 6586357 intron dpr11 - chr3R 6586422 intron dpr11 - chr3R 6586487 intron dpr11 - chr3R_4_6585001 chr3R_6585001 RAL-796 1183 chr3R 6589907 6589930 chr3R 6589989 6590012 6 82 2.5 1.0 1.8 2.1 105 chr3R 6589907 intron dpr11 - chr3R 6589960 intron dpr11 - chr3R 6590012 intron dpr11 - chr3R_6_6585001 chr3R_6585001 RAL-796 1184 chr3R 6639909 6639928 chr3R 6639987 6640006 8 78 4.5 0.0 2.2 2.5 97 chr3R 6639909 intergenic not near genes chr3R 6639958 intergenic not near genes chr3R 6640006 intergenic not near genes chr3R_8_6635001 chr3R_6635001 RAL-796 1185 chr3R 6646564 6646587 chr3R 6646649 6646672 10 85 2.0 2.0 2.0 3.3 108 chr3R 6646564 intergenic Taf1 + chr3R 6646618 intergenic Taf1 + chr3R 6646672 intergenic Taf1 + chr3R_10_6645001 chr3R_6645001 RAL-796 1186 chr3R 6705687 6705708 chr3R 6705911 6705932 6 224 0.0 2.0 1.0 3.0 245 chr3R 6705687 intergenic not near genes chr3R 6705810 intergenic not near genes chr3R 6705932 intergenic not near genes chr3R_6_6705001 chr3R_6705001 RAL-796 1187 chr3R 6722154 6722169 chr3R 6722234 6722245 4 79 5.5 3.0 4.2 0.8 91 chr3R 6722154 intron pb - chr3R 6722200 intron pb - chr3R 6722245 intron pb - chr3R_4_6720001 chr3R_6720001 RAL-796 1188 chr3R 6737501 6737531 chr3R 6739288 6739318 Doc 9 1787 2.0 1.0 1.5 3.6 1817 chr3R 6737501 intron pb - chr3R 6738410 intron pb - chr3R 6739318 intron pb - chr3R_9_6735001 chr3R_6735001 RAL-796 1189 chr3R 6740758 6740772 chr3R 6740838 6740852 5 79 0.0 1.0 0.5 3.3 94 chr3R 6740758 intron pb - chr3R 6740805 intron pb - chr3R 6740852 intron pb - chr3R_5_6740001 chr3R_6740001 RAL-796 1190 chr3R 6819636 6819665 chr3R 6819719 6819749 10 84 3.0 2.0 2.5 2.9 113 chr3R 6819636 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819692 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819749 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R_10_6815001 chr3R_6815001 RAL-796 1191 chr3R 6891251 6891267 chr3R 6891324 6891343 8 76 2.5 3.0 2.8 2.1 92 chr3R 6891251 intergenic not near genes chr3R 6891297 intergenic not near genes chr3R 6891343 intergenic not near genes chr3R_8_6890001 chr3R_6890001 RAL-796 1192 chr3R 6918060 6918095 chr3R 6918138 6918173 9 78 1.0 0.5 0.8 5.0 113 chr3R 6918060 intron Antp - chr3R 6918116 intron Antp - chr3R 6918173 intron Antp - chr3R_9_6915001 chr3R_6915001 RAL-796 1193 chr3R 6933230 6933250 chr3R 6933447 6933467 4 217 4.0 1.0 2.5 1.1 237 chr3R 6933230 intron Antp - chr3R 6933348 intron Antp - chr3R 6933467 intron Antp - chr3R_4_6930001 chr3R_6930001 RAL-796 1194 chr3R 6973739 6973757 chr3R 6973827 6973845 4 88 3.0 1.0 2.0 1.3 106 chr3R 6973739 intron Antp - chr3R 6973792 intron Antp - chr3R 6973845 intron Antp - chr3R_4_6970001 chr3R_6970001 RAL-796 1195 chr3R 7092784 7092818 chr3R 7093348 7093382 12 564 2.0 5.5 3.8 2.5 598 chr3R 7092784 3` UTR CR43685 - chr3R 7093083 intron CR43685 - chr3R 7093382 3` UTR CR43685 - chr3R_12_7090001 chr3R_7090001 RAL-796 1196 chr3R 7103283 7103317 chr3R 7103359 7103388 14 74 6.0 5.0 5.5 2.2 105 chr3R 7103283 intron Alh - chr3R 7103336 intron Alh - chr3R 7103388 intron Alh - chr3R_14_7100001 chr3R_7100001 RAL-796 1197 chr3R 7210609 7210616 chr3R 7210695 7210702 4 86 0.0 4.0 2.0 1.3 93 chr3R 7210609 intergenic not near genes chr3R 7210656 intergenic not near genes chr3R 7210702 intergenic not near genes chr3R_4_7210001 chr3R_7210001 RAL-796 1198 chr3R 7356607 7356641 chr3R 7356714 7356747 7 105 2.0 1.5 1.8 2.5 140 chr3R 7356607 intergenic not near genes chr3R 7356677 intergenic not near genes chr3R 7356747 intergenic not near genes chr3R_7_7355001 chr3R_7355001 RAL-796 1199 chr3R 7396054 7396075 chr3R 7396149 7396170 7 95 1.5 1.0 1.2 3.2 116 chr3R 7396054 intergenic not near genes chr3R 7396112 intergenic not near genes chr3R 7396170 intergenic not near genes chr3R_7_7395001 chr3R_7395001 RAL-796 1200 chr3R 7396376 7396388 chr3R 7396479 7396491 4 103 0.0 2.0 1.0 2.0 115 chr3R 7396376 intergenic not near genes chr3R 7396434 intergenic not near genes chr3R 7396491 intergenic not near genes chr3R_4_7395001 chr3R_7395001 RAL-796 1201 chr3R 7428716 7428753 chr3R 7428892 7428929 16 176 0.5 2.5 1.5 6.4 213 chr3R 7428716 intergenic not near genes chr3R 7428822 intergenic not near genes chr3R 7428929 intergenic not near genes chr3R_16_7425001 chr3R_7425001 RAL-796 1202 chr3R 7447991 7448010 chr3R 7448069 7448088 7 78 2.5 5.5 4.0 1.4 97 chr3R 7447991 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448088 intergenic not near genes chr3R_7_7445001 chr3R_7445001 RAL-796 1203 chr3R 7481831 7481860 chr3R 7481909 7481935 5 75 2.5 1.0 1.8 1.8 104 chr3R 7481831 intergenic not near genes chr3R 7481883 intergenic not near genes chr3R 7481935 intergenic not near genes chr3R_5_7480001 chr3R_7480001 RAL-796 1204 chr3R 7498854 7498883 chr3R 7498934 7498963 7 80 1.5 3.0 2.2 2.2 109 chr3R 7498854 intron alpha-Est9 - chr3R 7498908 intron alpha-Est9 - chr3R 7498963 intron alpha-Est9 - chr3R_7_7495001 chr3R_7495001 RAL-796 1205 chr3R 7514085 7514116 chr3R 7514267 7514298 8 181 1.0 4.5 2.8 2.1 213 chr3R 7514085 intron alpha-Est8 - chr3R 7514192 intron alpha-Est8 - chr3R 7514298 intron alpha-Est8 - chr3R_8_7510001 chr3R_7510001 RAL-796 1206 chr3R 7618003 7618021 chr3R 7618092 7618113 6 91 0.5 3.5 2.0 2.0 110 chr3R 7618003 intron CG34127 - chr3R 7618058 intron CG34127 - chr3R 7618113 intron CG34127 - chr3R_6_7615001 chr3R_7615001 RAL-796 1207 chr3R 7677918 7677947 chr3R 7678031 7678045 8 109 1.0 3.0 2.0 2.7 127 chr3R 7677918 intron Nlg1 + chr3R 7677982 intron Nlg1 + chr3R 7678045 intron Nlg1 + chr3R_8_7675001 chr3R_7675001 RAL-796 1208 chr3R 7694588 7694609 chr3R 7713649 7713670 invader3 4 19061 0.0 2.0 1.0 2.0 19082 chr3R 7694588 3` UTR Nlg1 + chr3R 7704129 intergenic not near genes chr3R 7713670 intergenic not near genes chr3R_4_7700001 chr3R_7700001 RAL-796 1209 chr3R 7729466 7729498 chr3R 7737404 7737436 Stalker2 7 7938 2.0 2.5 2.2 2.2 7970 chr3R 7729466 intergenic not near genes chr3R 7733451 intergenic not near genes chr3R 7737436 intergenic not near genes chr3R_7_7730001 chr3R_7730001 RAL-796 1210 chr3R 7793351 7793369 chr3R 7793430 7793448 5 79 3.0 0.5 1.8 1.8 97 chr3R 7793351 3` UTR CG10086 + chr3R 7793400 3` UTR CG10086 + chr3R 7793448 3` UTR CG10086 + chr3R_5_7790001 chr3R_7790001 RAL-796 1211 chr3R 7849645 7849673 chr3R 7850812 7850839 1360 13 1167 0.5 3.5 2.0 4.3 1194 chr3R 7849645 intron CG34384 + chr3R 7850242 intron CG34384 + chr3R 7850839 intron CG34384 + chr3R_13_7850001 chr3R_7850001 RAL-796 1212 chr3R 7857641 7857654 chr3R 7857724 7857737 5 83 3.5 3.0 3.2 1.2 96 chr3R 7857641 3` UTR CG17816 - chr3R 7857689 3` UTR CG17816 - chr3R 7857737 3` UTR CG17816 - chr3R_5_7855001 chr3R_7855001 RAL-796 1213 chr3R 7883125 7883148 chr3R 7883203 7883226 9 78 3.0 1.5 2.2 2.8 101 chr3R 7883125 intron CG17816 - chr3R 7883176 intron CG17816 - chr3R 7883226 intron CG17816 - chr3R_9_7880001 chr3R_7880001 RAL-796 1214 chr3R 7973317 7973344 chr3R 7974379 7974406 1360 5 1062 0.0 2.0 1.0 2.5 1089 chr3R 7973317 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974406 intergenic CD98hc - chr3R_5_7970001 chr3R_7970001 RAL-796 1215 chr3R 8040655 8040671 chr3R 8040740 8040755 4 85 1.5 1.0 1.2 1.8 100 chr3R 8040655 intergenic not near genes chr3R 8040705 intergenic not near genes chr3R 8040755 intergenic CG43060 + chr3R_4_8040001 chr3R_8040001 RAL-796 1216 chr3R 8070912 8070927 chr3R 8070992 8071008 4 81 4.0 6.0 5.0 0.7 96 chr3R 8070912 intron mAChR-B + chr3R 8070960 intron mAChR-B + chr3R 8071008 intron mAChR-B + chr3R_4_8070001 chr3R_8070001 RAL-796 1217 chr3R 8094420 8094439 chr3R 8099725 8099744 Transpac 6 5305 1.5 3.0 2.2 1.9 5324 chr3R 8094420 intron CG7900 + chr3R 8097082 intron CG7900 + chr3R 8099744 intron CG7900 + chr3R_6_8095001 chr3R_8095001 RAL-796 1218 chr3R 8101763 8101783 chr3R 8104846 8104867 G2 7 3083 3.0 0.5 1.8 2.5 3104 chr3R 8101763 exon CG7900 + chr3R 8103315 intron CG7900 + chr3R 8104867 3` UTR CG7900 + chr3R_7_8100001 chr3R_8100001 RAL-796 1219 chr3R 8114183 8114195 chr3R 8114258 8114277 8 84 1.5 5.5 3.5 1.8 94 chr3R 8114183 intron puc + chr3R 8114230 intron puc + chr3R 8114277 intron puc + chr3R_8_8110001 chr3R_8110001 RAL-796 1220 chr3R 8154289 8154312 chr3R 8154374 8154397 7 85 2.0 2.5 2.2 2.2 108 chr3R 8154289 intron grn - chr3R 8154343 intron grn - chr3R 8154397 intron grn - chr3R_7_8150001 chr3R_8150001 RAL-796 1221 chr3R 8183545 8183575 chr3R 8183649 8183678 9 104 1.5 5.0 3.2 2.1 133 chr3R 8183545 intergenic not near genes chr3R 8183612 intergenic not near genes chr3R 8183678 intergenic not near genes chr3R_9_8180001 chr3R_8180001 RAL-796 1222 chr3R 8247894 8247924 chr3R 8247976 8248006 10 82 3.0 1.0 2.0 3.3 112 chr3R 8247894 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8247950 intron,intron CG18749 +,CG33722 + chr3R 8248006 3` UTR,3` UTR CG18749 +,CG33722 + chr3R_10_8245001 chr3R_8245001 RAL-796 1223 chr3R 8273733 8273764 chr3R 8273819 8273851 11 86 3.0 0.5 1.8 3.9 118 chr3R 8273733 intergenic not near genes chr3R 8273792 intergenic not near genes chr3R 8273851 intergenic not near genes chr3R_11_8270001 chr3R_8270001 RAL-796 1224 chr3R 8293638 8293662 chr3R 8293718 8293742 5 80 1.0 0.0 0.5 3.3 104 chr3R 8293638 intergenic CG31463 +,CG9626 - chr3R 8293690 intergenic CG31463 +,CG9626 - chr3R 8293742 intergenic CG9626 -,CG31463 + chr3R_5_8290001 chr3R_8290001 RAL-796 1225 chr3R 8293998 8294015 chr3R 8294175 8294192 6 177 3.0 5.0 4.0 1.2 194 chr3R 8293998 3` UTR CG9626 - chr3R 8294095 3` UTR CG9626 - chr3R 8294192 3` UTR CG9626 - chr3R_6_8290001 chr3R_8290001 RAL-796 1226 chr3R 8326552 8326560 chr3R 8326648 8326657 6 96 3.5 3.5 3.5 1.3 105 chr3R 8326552 intron Poxm - chr3R 8326604 intron Poxm - chr3R 8326657 intron Poxm - chr3R_6_8325001 chr3R_8325001 RAL-796 1227 chr3R 8326564 8326573 chr3R 8326645 8326670 7 91 2.5 3.5 3.0 1.8 106 chr3R 8326564 intron Poxm - chr3R 8326617 intron Poxm - chr3R 8326670 intron Poxm - chr3R_7_8325001 chr3R_8325001 RAL-796 1228 chr3R 8339246 8339247 chr3R 21907534 21907536 15 13568288 12.0 24.0 18.0 0.8 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_15_15120001 chr3R_15120001 RAL-796 1229 chr3R 8339342 8339375 chr3R 8339442 8339475 11 100 2.0 2.0 2.0 3.7 133 chr3R 8339342 intergenic not near genes chr3R 8339408 intergenic not near genes chr3R 8339475 intergenic CG9603 - chr3R_11_8335001 chr3R_8335001 RAL-796 1230 chr3R 8403006 8403039 chr3R 8412171 8412204 roo 10 9165 1.5 4.5 3.0 2.5 9198 chr3R 8403006 intron CG45263 - chr3R 8407605 intron CG45263 - chr3R 8412204 intron CG45263 - chr3R_10_8405001 chr3R_8405001 RAL-796 1231 chr3R 8478080 8478108 chr3R 8478160 8478188 5 80 0.5 1.5 1.0 2.5 108 chr3R 8478080 intergenic CG45263 - chr3R 8478134 intergenic not near genes chr3R 8478188 intergenic not near genes chr3R_5_8475001 chr3R_8475001 RAL-796 1232 chr3R 8570478 8570510 chr3R 8575114 8575145 HMS-Beagle 10 4634 1.5 4.0 2.8 2.6 4667 chr3R 8570478 intergenic not near genes chr3R 8572812 intergenic not near genes chr3R 8575145 intergenic not near genes chr3R_10_8570001 chr3R_8570001 RAL-796 1233 chr3R 8614792 8614819 chr3R 8614995 8615022 6 203 0.5 6.0 3.2 1.4 230 chr3R 8614792 intron 5-HT2B + chr3R 8614907 intron 5-HT2B + chr3R 8615022 intron 5-HT2B + chr3R_6_8610001 chr3R_8610001 RAL-796 1234 chr3R 8621541 8621556 chr3R 8621617 8621633 11 76 4.0 5.5 4.8 1.9 92 chr3R 8621541 intron 5-HT2B + chr3R 8621587 intron 5-HT2B + chr3R 8621633 intron 5-HT2B + chr3R_11_8620001 chr3R_8620001 RAL-796 1235 chr3R 8636933 8636965 chr3R 8637236 8637267 15 302 2.5 4.0 3.2 3.6 334 chr3R 8636933 intergenic not near genes chr3R 8637100 intergenic not near genes chr3R 8637267 intergenic not near genes chr3R_15_8635001 chr3R_8635001 RAL-796 1236 chr3R 8707366 8707388 chr3R 8709807 8709822 jockey 7 2440 3.0 3.0 3.0 1.8 2456 chr3R 8707366 intergenic not near genes chr3R 8708594 intergenic not near genes chr3R 8709822 intergenic not near genes chr3R_7_8705001 chr3R_8705001 RAL-796 1237 chr3R 8875549 8875570 chr3R 8875625 8875627 9 72 2.5 3.0 2.8 2.4 78 chr3R 8875549 intron pyd - chr3R 8875588 intron pyd - chr3R 8875627 intron pyd - chr3R_9_8875001 chr3R_8875001 RAL-796 1238 chr3R 8917894 8917910 chr3R 8917974 8917990 8 80 3.0 5.0 4.0 1.6 96 chr3R 8917894 intron pyd - chr3R 8917942 intron pyd - chr3R 8917990 intron pyd - chr3R_8_8915001 chr3R_8915001 RAL-796 1239 chr3R 9036373 9036402 chr3R 9036451 9036480 6 78 4.5 2.0 3.2 1.4 107 chr3R 9036373 intron neur - chr3R 9036426 intron neur - chr3R 9036480 intron neur - chr3R_6_9035001 chr3R_9035001 RAL-796 1240 chr3R 9085116 9085141 chr3R 9085514 9085537 5 397 4.0 3.0 3.5 1.1 421 chr3R 9085116 intron pum - chr3R 9085326 intron pum - chr3R 9085537 intron pum - chr3R_5_9085001 chr3R_9085001 RAL-796 1241 chr3R 9091227 9091253 chr3R 9091317 9091343 8 90 10.5 20.5 15.5 0.5 116 chr3R 9091227 intron pum - chr3R 9091285 intron pum - chr3R 9091343 intron pum - chr3R_8_9090001 chr3R_9090001 RAL-796 1242 chr3R 9101840 9101864 chr3R 9101937 9101962 4 98 4.0 3.0 3.5 0.9 122 chr3R 9101840 intron pum - chr3R 9101901 intron pum - chr3R 9101962 intron pum - chr3R_4_9100001 chr3R_9100001 RAL-796 1243 chr3R 9108869 9108883 chr3R 9108945 9108959 4 76 3.0 1.0 2.0 1.3 90 chr3R 9108869 intron pum - chr3R 9108914 intron pum - chr3R 9108959 intron pum - chr3R_4_9105001 chr3R_9105001 RAL-796 1244 chr3R 9141165 9141186 chr3R 9141253 9141275 8 89 6.0 7.5 6.8 1.0 110 chr3R 9141165 intron pum - chr3R 9141220 intron pum - chr3R 9141275 intron pum - chr3R_8_9140001 chr3R_9140001 RAL-796 1245 chr3R 9211456 9211491 chr3R 9211651 9211686 7 195 1.5 2.0 1.8 2.5 230 chr3R 9211456 intron pum - chr3R 9211571 intron pum - chr3R 9211686 intron pum - chr3R_7_9210001 chr3R_9210001 RAL-796 1246 chr3R 9278775 9278808 chr3R 9284035 9284067 Rt1a 24 5260 1.5 4.5 3.0 6.0 5292 chr3R 9278775 intergenic not near genes chr3R 9281421 intergenic not near genes chr3R 9284067 intergenic not near genes chr3R_24_9280001 chr3R_9280001 RAL-796 1247 chr3R 9319571 9319608 chr3R 9320006 9320043 jockey 13 435 5.0 3.0 4.0 2.6 472 chr3R 9319571 intron CG8861 - chr3R 9319807 intron CG8861 - chr3R 9320043 intron CG8861 - chr3R_13_9315001 chr3R_9315001 RAL-796 1248 chr3R 9434697 9434720 chr3R 9434778 9434807 14 86 4.5 6.0 5.2 2.3 110 chr3R 9434697 intron ps + chr3R 9434752 intron ps + chr3R 9434807 intron ps + chr3R_14_9430001 chr3R_9430001 RAL-796 1249 chr3R 9526588 9526621 chr3R 9526670 9526703 10 82 3.0 2.0 2.5 2.9 115 chr3R 9526588 exon CG8176 + chr3R 9526646 3` UTR CG8176 + chr3R 9526703 3` UTR CG8176 + chr3R_10_9525001 chr3R_9525001 RAL-796 1250 chr3R 9592494 9592515 chr3R 9592847 9592868 5 353 0.0 3.5 1.8 1.8 374 chr3R 9592494 intron CG8312 + chr3R 9592681 intron CG8312 + chr3R 9592868 intron CG8312 + chr3R_5_9590001 chr3R_9590001 RAL-796 1251 chr3R 9601464 9601492 chr3R 9601579 9601610 10 118 1.5 3.0 2.2 3.1 146 chr3R 9601464 intron CG8312 + chr3R 9601537 intron CG8312 + chr3R 9601610 intron CG8312 + chr3R_10_9600001 chr3R_9600001 RAL-796 1252 chr3R 9608657 9608688 chr3R 9608923 9608953 16 265 4.0 3.5 3.8 3.3 296 chr3R 9608657 intron CG8312 + chr3R 9608805 intron CG8312 + chr3R 9608953 intron CG8312 + chr3R_16_9605001 chr3R_9605001 RAL-796 1253 chr3R 9644590 9644598 chr3R 9644671 9644679 5 81 2.5 4.5 3.5 1.1 89 chr3R 9644590 intron Dh44 + chr3R 9644634 intron Dh44 + chr3R 9644679 intron Dh44 + chr3R_5_9640001 chr3R_9640001 RAL-796 1254 chr3R 9702262 9702290 chr3R 9702338 9702366 10 75 1.0 2.5 1.8 3.6 104 chr3R 9702262 intron Unc-115a - chr3R 9702314 intron Unc-115a - chr3R 9702366 intron Unc-115a - chr3R_10_9700001 chr3R_9700001 RAL-796 1255 chr3R 9765923 9765934 chr3R 9765999 9766009 5 75 1.5 5.5 3.5 1.1 86 chr3R 9765923 3` UTR CG8478 + chr3R 9765966 3` UTR CG8478 + chr3R 9766009 3` UTR CG8478 + chr3R_5_9765001 chr3R_9765001 RAL-796 1256 chr3R 9765935 9765940 chr3R 9765998 9766016 5 73 1.5 5.5 3.5 1.1 81 chr3R 9765935 3` UTR CG8478 + chr3R 9765976 3` UTR CG8478 + chr3R 9766016 3` UTR CG8478 + chr3R_5_9765001 chr3R_9765001 RAL-796 1257 chr3R 9836873 9836903 chr3R 9836961 9836991 10 87 2.5 2.5 2.5 2.9 118 chr3R 9836873 intron Teh1 - chr3R 9836932 intron Teh1 - chr3R 9836991 intron Teh1 - chr3R_10_9835001 chr3R_9835001 RAL-796 1258 chr3R 9862850 9862863 chr3R 9862963 9862994 5 124 4.5 1.5 3.0 1.2 144 chr3R 9862850 intron Teh1 - chr3R 9862922 intron Teh1 - chr3R 9862994 intron Teh1 - chr3R_5_9860001 chr3R_9860001 RAL-796 1259 chr3R 9878022 9878026 chr3R 9878110 9878111 4 87 3.5 3.0 3.2 1.0 89 chr3R 9878022 intron,intron Glut4EF +,CR45029 - chr3R 9878066 intron,intron Glut4EF +,CR45029 - chr3R 9878111 intron,intron Glut4EF +,CR45029 - chr3R_4_9875001 chr3R_9875001 RAL-796 1260 chr3R 9884720 9884750 chr3R 9884808 9884840 10 88 2.0 1.5 1.8 3.6 120 chr3R 9884720 intron Glut4EF + chr3R 9884780 intron Glut4EF + chr3R 9884840 intron Glut4EF + chr3R_10_9880001 chr3R_9880001 RAL-796 1261 chr3R 9898794 9898810 chr3R 9898886 9898902 6 92 4.0 3.5 3.8 1.2 108 chr3R 9898794 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898902 intron Glut4EF + chr3R_6_9895001 chr3R_9895001 RAL-796 1262 chr3R 10073769 10073798 chr3R 10073878 10073906 11 109 0.5 6.0 3.2 2.6 137 chr3R 10073769 intergenic nerfin-2 +,CG5361 - chr3R 10073838 3` UTR CG5361 - chr3R 10073906 exon CG5361 - chr3R_11_10070001 chr3R_10070001 RAL-796 1263 chr3R 10183272 10183302 chr3R 10183395 10183425 7 123 1.0 2.5 1.8 2.5 153 chr3R 10183272 intron CG12814 - chr3R 10183348 intron CG12814 - chr3R 10183425 intron CG12814 - chr3R_7_10180001 chr3R_10180001 RAL-796 1264 chr3R 10188240 10188251 chr3R 10188350 10188360 4 110 0.5 0.0 0.2 3.3 120 chr3R 10188240 intron CG12814 - chr3R 10188300 intron CG12814 - chr3R 10188360 intron CG12814 - chr3R_4_10185001 chr3R_10185001 RAL-796 1265 chr3R 10231780 10231814 chr3R 10237357 10237391 mdg3 5 5577 0.0 2.0 1.0 2.5 5611 chr3R 10231780 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237391 intron CG42795 + chr3R_5_10230001 chr3R_10230001 RAL-796 1266 chr3R 10430675 10430702 chr3R 10430764 10430791 8 88 5.0 3.5 4.2 1.5 116 chr3R 10430675 intergenic not near genes chr3R 10430733 intergenic not near genes chr3R 10430791 intergenic not near genes chr3R_8_10430001 chr3R_10430001 RAL-796 1267 chr3R 10434464 10434477 chr3R 10434620 10434633 7 156 0.5 2.5 1.5 2.8 169 chr3R 10434464 intergenic Cyp12e1 + chr3R 10434548 intergenic Cyp12e1 + chr3R 10434633 intergenic Cyp12e1 + chr3R_7_10430001 chr3R_10430001 RAL-796 1268 chr3R 10474756 10474786 chr3R 10474859 10474869 7 99 2.0 0.5 1.2 3.2 113 chr3R 10474756 intergenic not near genes chr3R 10474812 intergenic not near genes chr3R 10474869 intergenic not near genes chr3R_7_10470001 chr3R_10470001 RAL-796 1269 chr3R 10531872 10531898 chr3R 10531953 10531979 6 81 5.0 1.5 3.2 1.4 107 chr3R 10531872 intron hth - chr3R 10531926 intron hth - chr3R 10531979 intron hth - chr3R_6_10530001 chr3R_10530001 RAL-796 1270 chr3R 10646103 10646141 chr3R 10646254 10646292 8 151 1.0 2.0 1.5 3.2 189 chr3R 10646103 intergenic CR44018 + chr3R 10646198 intergenic CR44018 + chr3R 10646292 intergenic not near genes chr3R_8_10645001 chr3R_10645001 RAL-796 1271 chr3R 10723764 10723789 chr3R 10723856 10723881 10 92 1.5 1.0 1.2 4.5 117 chr3R 10723764 intergenic not near genes chr3R 10723822 intergenic not near genes chr3R 10723881 intergenic not near genes chr3R_10_10720001 chr3R_10720001 RAL-796 1272 chr3R 10727642 10727678 chr3R 10727722 10727752 10 76 0.5 4.5 2.5 2.9 110 chr3R 10727642 intergenic not near genes chr3R 10727697 intergenic not near genes chr3R 10727752 intergenic not near genes chr3R_10_10725001 chr3R_10725001 RAL-796 1273 chr3R 10732337 10732345 chr3R 10733209 10733217 4 872 1.5 2.5 2.0 1.3 880 chr3R 10732337 intergenic not near genes chr3R 10732777 intergenic not near genes chr3R 10733217 intergenic not near genes chr3R_4_10730001 chr3R_10730001 RAL-796 1274 chr3R 10745427 10745454 chr3R 10745511 10745541 10 86 3.5 4.5 4.0 2.0 114 chr3R 10745427 intron TkR86C - chr3R 10745484 intron TkR86C - chr3R 10745541 intron TkR86C - chr3R_10_10745001 chr3R_10745001 RAL-796 1275 chr3R 10804186 10804208 chr3R 10811718 10811740 17.6 4 7532 0.5 4.5 2.5 1.1 7554 chr3R 10804186 intergenic CG14692 - chr3R 10807963 intergenic not near genes chr3R 10811740 3` UTR CG14693 - chr3R_4_10805001 chr3R_10805001 RAL-796 1276 chr3R 10868595 10868625 chr3R 10868670 10868703 4 70 0.0 3.0 1.5 1.6 108 chr3R 10868595 5` UTR SelR - chr3R 10868649 intergenic SelR -,Tsp86D + chr3R 10868703 intergenic Tsp86D +,SelR - chr3R_4_10865001 chr3R_10865001 RAL-796 1277 chr3R 10904909 10904935 chr3R 10905112 10905139 5 204 0.5 3.5 2.0 1.7 230 chr3R 10904909 intergenic not near genes chr3R 10905024 intergenic not near genes chr3R 10905139 intergenic not near genes chr3R_5_10905001 chr3R_10905001 RAL-796 1278 chr3R 10906831 10906852 chr3R 10906907 10906928 5 76 0.5 3.0 1.8 1.8 97 chr3R 10906831 intergenic not near genes chr3R 10906880 intergenic not near genes chr3R 10906928 intergenic not near genes chr3R_5_10905001 chr3R_10905001 RAL-796 1279 chr3R 10919689 10919716 chr3R 10919767 10919794 10 78 1.0 6.0 3.5 2.2 105 chr3R 10919689 intergenic not near genes chr3R 10919742 intergenic not near genes chr3R 10919794 intergenic not near genes chr3R_10_10915001 chr3R_10915001 RAL-796 1280 chr3R 10927283 10927305 chr3R 10927611 10927633 10 327 4.5 4.5 4.5 1.8 350 chr3R 10927283 intergenic not near genes chr3R 10927458 intergenic not near genes chr3R 10927633 intergenic not near genes chr3R_10_10925001 chr3R_10925001 RAL-796 1281 chr3R 10979650 10979685 chr3R 10979732 10979767 7 82 1.5 3.5 2.5 2.0 117 chr3R 10979650 intron CG34114 + chr3R 10979708 intron CG34114 + chr3R 10979767 intron CG34114 + chr3R_7_10975001 chr3R_10975001 RAL-796 1282 chr3R 10994281 10994310 chr3R 10994360 10994389 6 79 1.5 1.5 1.5 2.4 108 chr3R 10994281 intron CG34114 + chr3R 10994335 intron CG34114 + chr3R 10994389 intron CG34114 + chr3R_6_10990001 chr3R_10990001 RAL-796 1283 chr3R 11024186 11024213 chr3R 11024282 11024309 6 96 1.5 0.5 1.0 3.0 123 chr3R 11024186 intron CG34114 + chr3R 11024248 intron CG34114 + chr3R 11024309 intron CG34114 + chr3R_6_11020001 chr3R_11020001 RAL-796 1284 chr3R 11057400 11057434 chr3R 11057479 11057513 9 79 2.5 4.0 3.2 2.1 113 chr3R 11057400 intergenic not near genes chr3R 11057456 intergenic not near genes chr3R 11057513 intergenic not near genes chr3R_9_11055001 chr3R_11055001 RAL-796 1285 chr3R 11075798 11075828 chr3R 11075874 11075905 8 76 1.0 3.0 2.0 2.7 107 chr3R 11075798 intergenic not near genes chr3R 11075852 intergenic not near genes chr3R 11075905 intergenic not near genes chr3R_8_11075001 chr3R_11075001 RAL-796 1286 chr3R 11078947 11078978 chr3R 11079027 11079058 8 80 1.5 2.0 1.8 2.9 111 chr3R 11078947 intergenic not near genes chr3R 11079002 intergenic not near genes chr3R 11079058 intergenic not near genes chr3R_8_11075001 chr3R_11075001 RAL-796 1287 chr3R 11085464 11085490 chr3R 11085541 11085567 9 77 0.0 3.0 1.5 3.6 103 chr3R 11085464 3` UTR CR44940 - chr3R 11085516 intergenic CR44940 - chr3R 11085567 intergenic CR44940 - chr3R_9_11085001 chr3R_11085001 RAL-796 1288 chr3R 11102324 11102351 chr3R 11102405 11102431 9 81 4.0 1.0 2.5 2.6 107 chr3R 11102324 intergenic not near genes chr3R 11102378 intergenic not near genes chr3R 11102431 intergenic not near genes chr3R_9_11100001 chr3R_11100001 RAL-796 1289 chr3R 11112617 11112639 chr3R 11112877 11112899 6 261 23.0 15.0 19.0 0.3 282 chr3R 11112617 intergenic not near genes chr3R 11112758 intergenic not near genes chr3R 11112899 intergenic not near genes chr3R_6_11110001 chr3R_11110001 RAL-796 1290 chr3R 11130805 11130835 chr3R 11130977 11131006 11 172 2.0 1.5 1.8 3.9 201 chr3R 11130805 intergenic not near genes chr3R 11130906 intergenic not near genes chr3R 11131006 intergenic not near genes chr3R_11_11130001 chr3R_11130001 RAL-796 1291 chr3R 11144171 11144196 chr3R 11144549 11144574 4 378 4.0 2.0 3.0 1.0 403 chr3R 11144171 intergenic CheA86a - chr3R 11144372 3` UTR CheA86a - chr3R 11144574 exon CheA86a - chr3R_4_11140001 chr3R_11140001 RAL-796 1292 chr3R 11284938 11284966 chr3R 11285022 11285038 5 78 4.0 1.5 2.8 1.3 100 chr3R 11284938 intron CR31386 - chr3R 11284988 intron CR31386 - chr3R 11285038 intron CR31386 - chr3R_5_11280001 chr3R_11280001 RAL-796 1293 chr3R 11313250 11313261 chr3R 11313334 11313350 6 88 2.0 4.0 3.0 1.5 100 chr3R 11313250 intergenic not near genes chr3R 11313300 intergenic not near genes chr3R 11313350 intergenic not near genes chr3R_6_11310001 chr3R_11310001 RAL-796 1294 chr3R 11342557 11342570 chr3R 11342633 11342646 4 76 6.0 2.5 4.2 0.8 89 chr3R 11342557 intron pros + chr3R 11342602 intron pros + chr3R 11342646 intron pros + chr3R_4_11340001 chr3R_11340001 RAL-796 1295 chr3R 11379248 11379267 chr3R 11388403 11388422 roo 5 9155 2.5 4.5 3.5 1.1 9174 chr3R 11379248 intron pros + chr3R 11383835 intron pros + chr3R 11388422 intron pros + chr3R_5_11380001 chr3R_11380001 RAL-796 1296 chr3R 11639229 11639243 chr3R 11639374 11639386 4 144 2.5 3.5 3.0 1.0 157 chr3R 11639229 intron Csk - chr3R 11639308 intron Csk - chr3R 11639386 intron Csk - chr3R_4_11635001 chr3R_11635001 RAL-796 1297 chr3R 11694723 11694746 chr3R 11694816 11694839 5 93 2.5 3.0 2.8 1.3 116 chr3R 11694723 intergenic Fer3 - chr3R 11694781 intergenic Fer3 - chr3R 11694839 intergenic not near genes chr3R_5_11690001 chr3R_11690001 RAL-796 1298 chr3R 11738344 11738368 chr3R 11742104 11742128 11 3760 23.0 6.5 14.8 0.7 3784 chr3R 11738344 exon Blm - chr3R 11740236 exon Blm - chr3R 11742128 5` UTR CG14722 + chr3R_11_11740001 chr3R_11740001 RAL-796 1299 chr3R 11841061 11841094 chr3R 11846252 11846284 BS 4 5190 1.0 7.0 4.0 0.8 5223 chr3R 11841061 intron CG6959 - chr3R 11843672 intron CG6959 - chr3R 11846284 intron CG6959 - chr3R_4_11840001 chr3R_11840001 RAL-796 1300 chr3R 11914379 11914396 chr3R 11914464 11914481 5 85 2.5 3.0 2.8 1.3 102 chr3R 11914379 intron Cad87A - chr3R 11914430 intron Cad87A - chr3R 11914481 intron Cad87A - chr3R_5_11910001 chr3R_11910001 RAL-796 1301 chr3R 11916433 11916459 chr3R 11916505 11916538 12 78 1.5 2.0 1.8 4.3 105 chr3R 11916433 intron Cad87A - chr3R 11916486 intron Cad87A - chr3R 11916538 intron Cad87A - chr3R_12_11915001 chr3R_11915001 RAL-796 1302 chr3R 11919304 11919338 chr3R 11919391 11919394 5 80 9.0 2.0 5.5 0.8 90 chr3R 11919304 intron Cad87A - chr3R 11919349 intron Cad87A - chr3R 11919394 intron Cad87A - chr3R_5_11915001 chr3R_11915001 RAL-796 1303 chr3R 11930232 11930269 chr3R 11930316 11930353 18 84 3.5 3.5 3.5 4.0 121 chr3R 11930232 intron Cad87A - chr3R 11930292 intron Cad87A - chr3R 11930353 intron Cad87A - chr3R_18_11930001 chr3R_11930001 RAL-796 1304 chr3R 11943196 11943220 chr3R 11943545 11943572 5 351 0.5 1.5 1.0 2.5 376 chr3R 11943196 intron Cad87A - chr3R 11943384 intron Cad87A - chr3R 11943572 intron Cad87A - chr3R_5_11940001 chr3R_11940001 RAL-796 1305 chr3R 11945389 11945394 chr3R 11945487 11945491 4 98 3.0 2.0 2.5 1.1 102 chr3R 11945389 intron Cad87A - chr3R 11945440 intron Cad87A - chr3R 11945491 intron Cad87A - chr3R_4_11945001 chr3R_11945001 RAL-796 1306 chr3R 12022885 12022913 chr3R 12025062 12025090 pogo 11 2174 5.0 4.5 4.8 1.9 2205 chr3R 12022885 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025090 intergenic not near genes chr3R_11_12020001 chr3R_12020001 RAL-796 1307 chr3R 12081997 12082023 chr3R 12082071 12082097 12 76 1.0 1.0 1.0 6.0 100 chr3R 12081997 intron CG14741 - chr3R 12082047 intron CG14741 - chr3R 12082097 intron CG14741 - chr3R_12_12080001 chr3R_12080001 RAL-796 1308 chr3R 12097250 12097276 chr3R 12097354 12097380 12 103 1.5 4.5 3.0 3.0 130 chr3R 12097250 intron dpr17 + chr3R 12097315 intron dpr17 + chr3R 12097380 intron dpr17 + chr3R_12_12095001 chr3R_12095001 RAL-796 1309 chr3R 12111904 12111909 chr3R 12111980 12111985 4 76 3.0 3.5 3.2 1.0 81 chr3R 12111904 intergenic dpr17 + chr3R 12111944 intergenic not near genes chr3R 12111985 intergenic not near genes chr3R_4_12110001 chr3R_12110001 RAL-796 1310 chr3R 12214347 12214367 chr3R 12214435 12214458 9 89 2.5 2.5 2.5 2.6 111 chr3R 12214347 3` UTR CG4848 - chr3R 12214402 3` UTR CG4848 - chr3R 12214458 3` UTR CG4848 - chr3R_9_12210001 chr3R_12210001 RAL-796 1311 chr3R 12247146 12247172 chr3R 12247230 12247256 6 85 2.0 1.0 1.5 2.4 110 chr3R 12247146 intergenic not near genes chr3R 12247201 intergenic not near genes chr3R 12247256 intergenic not near genes chr3R_6_12245001 chr3R_12245001 RAL-796 1312 chr3R 12299806 12299837 chr3R 12299899 12299930 17 91 2.0 7.5 4.8 2.9 124 chr3R 12299806 intron svp + chr3R 12299868 intron svp + chr3R 12299930 intron svp + chr3R_17_12295001 chr3R_12295001 RAL-796 1313 chr3R 12314223 12314261 chr3R 12314337 12314375 14 113 5.5 5.5 5.5 2.2 152 chr3R 12314223 intergenic not near genes chr3R 12314299 intergenic not near genes chr3R 12314375 intergenic not near genes chr3R_14_12310001 chr3R_12310001 RAL-796 1314 chr3R 12328161 12328189 chr3R 12328272 12328293 6 110 2.0 2.0 2.0 2.0 132 chr3R 12328161 intergenic CR45584 + chr3R 12328227 intergenic CR45584 + chr3R 12328293 intergenic CR45584 + chr3R_6_12325001 chr3R_12325001 RAL-796 1315 chr3R 12344143 12344158 chr3R 12344220 12344224 6 75 0.5 0.5 0.5 4.0 81 chr3R 12344143 intergenic not near genes chr3R 12344184 intergenic not near genes chr3R 12344224 intergenic not near genes chr3R_6_12340001 chr3R_12340001 RAL-796 1316 chr3R 12392894 12392900 chr3R 12392993 12393000 5 100 3.5 6.0 4.8 0.9 106 chr3R 12392894 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392947 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393000 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_5_12390001 chr3R_12390001 RAL-796 1317 chr3R 12436454 12436484 chr3R 12436541 12436569 12 86 3.0 2.0 2.5 3.4 115 chr3R 12436454 exon Desat2 + chr3R 12436512 exon Desat2 + chr3R 12436569 exon Desat2 + chr3R_12_12435001 chr3R_12435001 RAL-796 1318 chr3R 12520699 12520722 chr3R 12520786 12520810 10 87 4.0 2.0 3.0 2.5 111 chr3R 12520699 intron Octbeta3R - chr3R 12520754 intron Octbeta3R - chr3R 12520810 intron Octbeta3R - chr3R_10_12520001 chr3R_12520001 RAL-796 1319 chr3R 12522353 12522378 chr3R 12522439 12522463 5 84 5.0 2.0 3.5 1.1 110 chr3R 12522353 5` UTR Octbeta3R - chr3R 12522408 5` UTR Octbeta3R - chr3R 12522463 5` UTR Octbeta3R - chr3R_5_12520001 chr3R_12520001 RAL-796 1320 chr3R 12602397 12602418 chr3R 12602474 12602496 8 78 4.0 4.5 4.2 1.5 99 chr3R 12602397 intergenic not near genes chr3R 12602446 intergenic not near genes chr3R 12602496 intergenic not near genes chr3R_8_12600001 chr3R_12600001 RAL-796 1321 chr3R 12628618 12628632 chr3R 12628701 12628709 7 82 5.0 9.0 7.0 0.9 91 chr3R 12628618 intron Snx3 + chr3R 12628664 intron Snx3 + chr3R 12628709 intron Snx3 + chr3R_7_12625001 chr3R_12625001 RAL-796 1322 chr3R 12685421 12685451 chr3R 12685595 12685624 14 174 1.5 4.5 3.0 3.5 203 chr3R 12685421 intron kar - chr3R 12685522 intron kar - chr3R 12685624 intron kar - chr3R_14_12685001 chr3R_12685001 RAL-796 1323 chr3R 12787941 12787956 chr3R 12788024 12788039 5 82 1.5 0.5 1.0 2.5 98 chr3R 12787941 intergenic not near genes chr3R 12787990 intergenic not near genes chr3R 12788039 intergenic not near genes chr3R_5_12785001 chr3R_12785001 RAL-796 1324 chr3R 12876952 12876985 chr3R 12877035 12877068 8 83 1.5 3.0 2.2 2.5 116 chr3R 12876952 intergenic not near genes chr3R 12877010 intergenic not near genes chr3R 12877068 intergenic not near genes chr3R_8_12875001 chr3R_12875001 RAL-796 1325 chr3R 12920160 12920186 chr3R 12925357 12925389 copia 6 5202 1.0 5.0 3.0 1.5 5229 chr3R 12920160 intron beat-Vb + chr3R 12922774 intron beat-Vb + chr3R 12925389 intron beat-Vb + chr3R_6_12920001 chr3R_12920001 RAL-796 1326 chr3R 13061880 13061905 chr3R 13061975 13061997 5 94 2.0 1.0 1.5 2.0 117 chr3R 13061880 intron sim + chr3R 13061938 intron sim + chr3R 13061997 intron sim + chr3R_5_13060001 chr3R_13060001 RAL-796 1327 chr3R 13067108 13067134 chr3R 13067184 13067210 8 76 0.0 0.0 0.0 8.0 102 chr3R 13067108 intron sim + chr3R 13067159 intron sim + chr3R 13067210 intron sim + chr3R_8_13065001 chr3R_13065001 RAL-796 1328 chr3R 13075381 13075386 chr3R 13075462 13075467 4 81 2.5 3.0 2.8 1.1 86 chr3R 13075381 intron sim + chr3R 13075424 intron sim + chr3R 13075467 intron sim + chr3R_4_13075001 chr3R_13075001 RAL-796 1329 chr3R 13114396 13114427 chr3R 13114490 13114509 7 92 3.5 3.0 3.2 1.7 113 chr3R 13114396 intron timeout + chr3R 13114452 intron timeout + chr3R 13114509 intron timeout + chr3R_7_13110001 chr3R_13110001 RAL-796 1330 chr3R 13143040 13143062 chr3R 13148616 13148637 mdg3 4 5574 2.5 4.0 3.2 1.0 5597 chr3R 13143040 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145838 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148637 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-796 1331 chr3R 13171912 13171931 chr3R 13172822 13172841 12 912 25.0 13.0 19.0 0.6 929 chr3R 13171912 intergenic not near genes chr3R 13172376 intergenic not near genes chr3R 13172841 intergenic not near genes chr3R_12_13170001 chr3R_13170001 RAL-796 1332 chr3R 13173442 13173475 chr3R 13173524 13173557 8 82 1.5 3.0 2.2 2.5 115 chr3R 13173442 intergenic not near genes chr3R 13173500 intergenic not near genes chr3R 13173557 intergenic not near genes chr3R_8_13170001 chr3R_13170001 RAL-796 1333 chr3R 13195972 13195983 chr3R 13196063 13196078 5 94 0.0 3.0 1.5 2.0 106 chr3R 13195972 intergenic not near genes chr3R 13196025 intergenic not near genes chr3R 13196078 intergenic not near genes chr3R_5_13195001 chr3R_13195001 RAL-796 1334 chr3R 13248650 13248680 chr3R 13248749 13248779 15 99 3.0 3.5 3.2 3.6 129 chr3R 13248650 intron Ace - chr3R 13248714 intron Ace - chr3R 13248779 intron Ace - chr3R_15_13245001 chr3R_13245001 RAL-796 1335 chr3R 13260726 13260750 chr3R 13260857 13260881 8 131 2.5 4.0 3.2 1.9 155 chr3R 13260726 intron CG11686 + chr3R 13260804 intron CG11686 + chr3R 13260881 intron CG11686 + chr3R_8_13260001 chr3R_13260001 RAL-796 1336 chr3R 13274217 13274244 chr3R 13274296 13274323 6 79 2.5 5.0 3.8 1.2 106 chr3R 13274217 intergenic not near genes chr3R 13274270 intergenic not near genes chr3R 13274323 intergenic not near genes chr3R_6_13270001 chr3R_13270001 RAL-796 1337 chr3R 13305665 13305692 chr3R 13305752 13305779 7 87 1.0 2.0 1.5 2.8 114 chr3R 13305665 intron CG32473 + chr3R 13305722 intron CG32473 + chr3R 13305779 intron CG32473 + chr3R_7_13305001 chr3R_13305001 RAL-796 1338 chr3R 13306127 13306152 chr3R 13306514 13306539 10 387 1.0 2.0 1.5 4.0 412 chr3R 13306127 intron CG32473 + chr3R 13306333 intron CG32473 + chr3R 13306539 intron CG32473 + chr3R_10_13305001 chr3R_13305001 RAL-796 1339 chr3R 13314104 13314129 chr3R 13318892 13318916 Doc 8 4788 2.0 3.5 2.8 2.1 4812 chr3R 13314104 intergenic not near genes chr3R 13316510 intergenic not near genes chr3R 13318916 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 RAL-796 1340 chr3R 13323973 13323985 chr3R 13324083 13324096 5 111 0.5 2.0 1.2 2.3 123 chr3R 13323973 intergenic not near genes chr3R 13324034 intergenic not near genes chr3R 13324096 intergenic not near genes chr3R_5_13320001 chr3R_13320001 RAL-796 1341 chr3R 13326943 13326963 chr3R 13327038 13327059 6 95 2.0 3.0 2.5 1.7 116 chr3R 13326943 intergenic not near genes chr3R 13327001 intergenic not near genes chr3R 13327059 intergenic not near genes chr3R_6_13325001 chr3R_13325001 RAL-796 1342 chr3R 13470850 13470877 chr3R 13471179 13471206 7 329 0.5 4.5 2.5 2.0 356 chr3R 13470850 intergenic not near genes chr3R 13471028 intergenic not near genes chr3R 13471206 intergenic not near genes chr3R_7_13470001 chr3R_13470001 RAL-796 1343 chr3R 13529802 13529818 chr3R 13530011 13530027 5 209 7.5 2.5 5.0 0.8 225 chr3R 13529802 intergenic CG42778 - chr3R 13529914 intergenic not near genes chr3R 13530027 intergenic not near genes chr3R_5_13525001 chr3R_13525001 RAL-796 1344 chr3R 13603058 13603073 chr3R 13603149 13603163 6 91 3.5 1.5 2.5 1.7 105 chr3R 13603058 intergenic not near genes chr3R 13603110 intergenic not near genes chr3R 13603163 intergenic not near genes chr3R_6_13600001 chr3R_13600001 RAL-796 1345 chr3R 13693026 13693028 chr3R 21907534 21907536 13 8214507 12.0 24.0 18.0 0.7 8214510 chr3R 13693026 3` UTR flfl + chr3R 17800281 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_13_17800001 chr3R_17800001 RAL-796 1346 chr3R 13714522 13714535 chr3R 13714659 13714674 4 138 1.0 2.5 1.8 1.4 152 chr3R 13714522 intergenic CR34044 - chr3R 13714598 intergenic CR34044 - chr3R 13714674 intergenic CR34044 - chr3R_4_13710001 chr3R_13710001 RAL-796 1347 chr3R 13731402 13731437 chr3R 13731480 13731515 8 78 0.5 2.5 1.5 3.2 113 chr3R 13731402 intron CG34383 + chr3R 13731458 intron CG34383 + chr3R 13731515 intron CG34383 + chr3R_8_13730001 chr3R_13730001 RAL-796 1348 chr3R 13830186 13830212 chr3R 13830278 13830304 9 90 3.0 3.5 3.2 2.1 118 chr3R 13830186 intergenic not near genes chr3R 13830245 intergenic not near genes chr3R 13830304 intergenic not near genes chr3R_9_13830001 chr3R_13830001 RAL-796 1349 chr3R 13941424 13941456 chr3R 13941504 13941536 6 80 2.5 2.0 2.2 1.9 112 chr3R 13941424 intergenic not near genes chr3R 13941480 intergenic not near genes chr3R 13941536 intergenic not near genes chr3R_6_13940001 chr3R_13940001 RAL-796 1350 chr3R 13975389 13975404 chr3R 13975468 13975484 5 79 2.5 1.5 2.0 1.7 95 chr3R 13975389 intron rdx - chr3R 13975436 intron rdx - chr3R 13975484 intron rdx - chr3R_5_13975001 chr3R_13975001 RAL-796 1351 chr3R 14058124 14058153 chr3R 14058244 14058273 8 120 0.0 1.5 0.8 4.4 149 chr3R 14058124 intron foxo + chr3R 14058198 intron foxo + chr3R 14058273 intron foxo + chr3R_8_14055001 chr3R_14055001 RAL-796 1352 chr3R 14062841 14062875 chr3R 14062918 14062952 13 77 2.0 3.0 2.5 3.7 111 chr3R 14062841 intron foxo + chr3R 14062896 intron foxo + chr3R 14062952 intron foxo + chr3R_13_14060001 chr3R_14060001 RAL-796 1353 chr3R 14067141 14067151 chr3R 14067220 14067230 6 79 3.5 0.5 2.0 2.0 89 chr3R 14067141 exon foxo + chr3R 14067186 intron foxo + chr3R 14067230 intron foxo + chr3R_6_14065001 chr3R_14065001 RAL-796 1354 chr3R 14079822 14079846 chr3R 14079904 14079928 4 82 0.5 0.0 0.2 3.3 106 chr3R 14079822 intron foxo + chr3R 14079875 intron foxo + chr3R 14079928 intron foxo + chr3R_4_14075001 chr3R_14075001 RAL-796 1355 chr3R 14083402 14083435 chr3R 14083501 14083536 7 101 1.0 0.0 0.5 4.7 134 chr3R 14083402 intron foxo + chr3R 14083469 intron foxo + chr3R 14083536 intron foxo + chr3R_7_14080001 chr3R_14080001 RAL-796 1356 chr3R 14117440 14117472 chr3R 14117516 14117548 10 76 3.0 3.5 3.2 2.4 108 chr3R 14117440 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117548 intron Kif19A - chr3R_10_14115001 chr3R_14115001 RAL-796 1357 chr3R 14144212 14144243 chr3R 14144292 14144325 14 80 2.0 4.0 3.0 3.5 113 chr3R 14144212 intergenic not near genes chr3R 14144268 intergenic not near genes chr3R 14144325 intergenic not near genes chr3R_14_14140001 chr3R_14140001 RAL-796 1358 chr3R 14194446 14194460 chr3R 14203595 14203609 roo 5 9149 4.0 2.5 3.2 1.2 9163 chr3R 14194446 intron Dop1R1 - chr3R 14199028 intron Dop1R1 - chr3R 14203609 intron Dop1R1 - chr3R_5_14195001 chr3R_14195001 RAL-796 1359 chr3R 14319067 14319095 chr3R 14319149 14319177 5 82 5.0 2.0 3.5 1.1 110 chr3R 14319067 3` UTR pr-set7 + chr3R 14319122 3` UTR pr-set7 + chr3R 14319177 3` UTR pr-set7 + chr3R_5_14315001 chr3R_14315001 RAL-796 1360 chr3R 14384633 14384637 chr3R 14384712 14384727 4 86 0.5 0.0 0.2 3.3 94 chr3R 14384633 intergenic not near genes chr3R 14384680 intergenic not near genes chr3R 14384727 intergenic not near genes chr3R_4_14380001 chr3R_14380001 RAL-796 1361 chr3R 14449933 14449948 chr3R 14450016 14450031 4 83 2.0 2.0 2.0 1.3 98 chr3R 14449933 intron cv-c - chr3R 14449982 intron cv-c - chr3R 14450031 intron cv-c - chr3R_4_14445001 chr3R_14445001 RAL-796 1362 chr3R 14449949 14449956 chr3R 14450012 14450034 4 76 1.5 2.0 1.8 1.4 85 chr3R 14449949 intron cv-c - chr3R 14449992 intron cv-c - chr3R 14450034 intron cv-c - chr3R_4_14445001 chr3R_14445001 RAL-796 1363 chr3R 14459917 14459941 chr3R 14460446 14460465 8 528 1.0 1.0 1.0 4.0 548 chr3R 14459917 intron cv-c - chr3R 14460191 intron cv-c - chr3R 14460465 intron cv-c - chr3R_8_14460001 chr3R_14460001 RAL-796 1364 chr3R 14497403 14497438 chr3R 14497484 14497519 16 80 3.5 1.0 2.2 5.0 116 chr3R 14497403 intron CR44177 + chr3R 14497461 intron CR44177 + chr3R 14497519 intron CR44177 + chr3R_16_14495001 chr3R_14495001 RAL-796 1365 chr3R 14514492 14514512 chr3R 14514576 14514596 10 85 2.0 3.0 2.5 2.9 104 chr3R 14514492 3` UTR Pde6 - chr3R 14514544 3` UTR Pde6 - chr3R 14514596 3` UTR Pde6 - chr3R_10_14510001 chr3R_14510001 RAL-796 1366 chr3R 14548580 14548602 chr3R 14548663 14548681 5 84 4.5 2.0 3.2 1.2 101 chr3R 14548580 intron Pde6 - chr3R 14548630 intron Pde6 - chr3R 14548681 intron Pde6 - chr3R_5_14545001 chr3R_14545001 RAL-796 1367 chr3R 14560899 14560925 chr3R 14560992 14561018 5 94 2.0 2.5 2.2 1.6 119 chr3R 14560899 intergenic CG14850 + chr3R 14560958 5` UTR CG14850 + chr3R 14561018 exon CG14850 + chr3R_5_14560001 chr3R_14560001 RAL-796 1368 chr3R 14704389 14704419 chr3R 14704466 14704496 13 77 1.5 5.0 3.2 3.1 107 chr3R 14704389 intron kibra - chr3R 14704442 intron kibra - chr3R 14704496 intron kibra - chr3R_13_14700001 chr3R_14700001 RAL-796 1369 chr3R 14779075 14779096 chr3R 14779155 14779176 6 80 2.5 2.5 2.5 1.7 101 chr3R 14779075 intron jvl + chr3R 14779126 intron jvl + chr3R 14779176 intron jvl + chr3R_6_14775001 chr3R_14775001 RAL-796 1370 chr3R 14869864 14869895 chr3R 14869955 14869986 12 91 3.5 3.5 3.5 2.7 122 chr3R 14869864 intron btsz - chr3R 14869925 intron btsz - chr3R 14869986 intron btsz - chr3R_12_14865001 chr3R_14865001 RAL-796 1371 chr3R 14973170 14973197 chr3R 14973247 14973274 10 77 1.0 3.0 2.0 3.3 104 chr3R 14973170 intergenic not near genes chr3R 14973222 intergenic not near genes chr3R 14973274 intergenic not near genes chr3R_10_14970001 chr3R_14970001 RAL-796 1372 chr3R 15006857 15006889 chr3R 15007236 15007268 7 379 5.5 1.5 3.5 1.6 411 chr3R 15006857 intergenic not near genes chr3R 15007062 intergenic not near genes chr3R 15007268 intergenic not near genes chr3R_7_15005001 chr3R_15005001 RAL-796 1373 chr3R 15026334 15026343 chr3R 15026420 15026429 5 86 1.5 3.0 2.2 1.6 95 chr3R 15026334 intergenic not near genes chr3R 15026382 intergenic not near genes chr3R 15026429 intergenic not near genes chr3R_5_15025001 chr3R_15025001 RAL-796 1374 chr3R 15079427 15079432 chr3R 15079556 15079561 4 131 3.5 1.5 2.5 1.1 134 chr3R 15079427 3` UTR CG6966 - chr3R 15079494 3` UTR CG6966 - chr3R 15079561 3` UTR CG6966 - chr3R_4_15075001 chr3R_15075001 RAL-796 1375 chr3R 15079434 15079449 chr3R 15079555 15079583 6 132 3.0 1.5 2.2 1.9 149 chr3R 15079434 3` UTR CG6966 - chr3R 15079508 3` UTR CG6966 - chr3R 15079583 3` UTR CG6966 - chr3R_6_15075001 chr3R_15075001 RAL-796 1376 chr3R 15132057 15132087 chr3R 15135117 15135147 Juan 8 3060 7.5 3.5 5.5 1.2 3090 chr3R 15132057 intergenic CG42788 - chr3R 15133602 intergenic not near genes chr3R 15135147 3` UTR CG6912 - chr3R_8_15130001 chr3R_15130001 RAL-796 1377 chr3R 15162543 15162561 chr3R 15167311 15167329 F-element 4 4768 3.0 0.0 1.5 1.6 4786 chr3R 15162543 intron Gyc88E + chr3R 15164936 intron Gyc88E + chr3R 15167329 intron Gyc88E + chr3R_4_15160001 chr3R_15160001 RAL-796 1378 chr3R 15224376 15224396 chr3R 15224517 15224537 4 141 3.0 3.0 3.0 1.0 161 chr3R 15224376 exon CG31344 - chr3R 15224456 intron CG31344 - chr3R 15224537 intron CG31344 - chr3R_4_15220001 chr3R_15220001 RAL-796 1379 chr3R 15406149 15406167 chr3R 15406230 15406248 4 80 4.5 5.5 5.0 0.7 99 chr3R 15406149 intron CG6125 - chr3R 15406198 intron CG6125 - chr3R 15406248 intron CG6125 - chr3R_4_15405001 chr3R_15405001 RAL-796 1380 chr3R 15401212 15401235 chr3R 15407874 15407897 6 6663 16.0 19.5 17.8 0.3 6685 chr3R 15401212 3` UTR Rbp + chr3R 15404554 intron CG6125 - chr3R 15407897 intergenic not near genes chr3R_6_15400001 chr3R_15400001 RAL-796 1381 chr3R 15416247 15416283 chr3R 15416326 15416326 13 77 1.5 1.5 1.5 5.2 79 chr3R 15416247 3` UTR Atx2 + chr3R 15416286 3` UTR Atx2 + chr3R 15416326 3` UTR Atx2 + chr3R_13_15415001 chr3R_15415001 RAL-796 1382 chr3R 15452279 15452303 chr3R 15452356 15452380 12 77 2.5 4.5 3.5 2.7 101 chr3R 15452279 intron AdamTS-A - chr3R 15452330 intron AdamTS-A - chr3R 15452380 intron AdamTS-A - chr3R_12_15450001 chr3R_15450001 RAL-796 1383 chr3R 15517600 15517632 chr3R 15517683 15517714 6 82 2.5 2.5 2.5 1.7 114 chr3R 15517600 intergenic not near genes chr3R 15517657 intergenic not near genes chr3R 15517714 intergenic not near genes chr3R_6_15515001 chr3R_15515001 RAL-796 1384 chr3R 15566156 15566176 chr3R 15566239 15566254 6 82 4.0 1.5 2.8 1.6 98 chr3R 15566156 intergenic not near genes chr3R 15566205 intergenic not near genes chr3R 15566254 intergenic not near genes chr3R_6_15565001 chr3R_15565001 RAL-796 1385 chr3R 15601163 15601196 chr3R 15608685 15608718 412 11 7521 6.0 7.0 6.5 1.5 7555 chr3R 15601163 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608718 intergenic not near genes chr3R_11_15600001 chr3R_15600001 RAL-796 1386 chr3R 15635231 15635239 chr3R 15635343 15635351 5 112 0.0 0.0 0.0 5.0 120 chr3R 15635231 intergenic CG43335 + chr3R 15635291 intergenic CG43335 + chr3R 15635351 intergenic CG43335 + chr3R_5_15635001 chr3R_15635001 RAL-796 1387 chr3R 15691185 15691320 chr3R 15691287 15691407 5 94 0.0 0.0 0.0 5.0 222 chr3R 15691185 intergenic not near genes chr3R 15691296 intergenic not near genes chr3R 15691407 intergenic not near genes chr3R_5_15690001 chr3R_15690001 RAL-796 1388 chr3R 15715819 15715825 chr3R 15715904 15715910 4 85 3.5 2.0 2.8 1.1 91 chr3R 15715819 exon CG31294 - chr3R 15715864 intron CG31294 - chr3R 15715910 intron CG31294 - chr3R_4_15715001 chr3R_15715001 RAL-796 1389 chr3R 15734173 15734199 chr3R 15734264 15734290 5 91 2.0 2.5 2.2 1.6 117 chr3R 15734173 intergenic not near genes chr3R 15734232 intergenic not near genes chr3R 15734290 intergenic not near genes chr3R_5_15730001 chr3R_15730001 RAL-796 1390 chr3R 15790135 15790280 chr3R 15790243 15790398 26 110 7.0 13.5 10.2 2.3 263 chr3R 15790135 exon c(3)G - chr3R 15790266 exon c(3)G - chr3R 15790398 exon c(3)G - chr3R_26_15790001 chr3R_15790001 RAL-796 1391 chr3R 15790379 15790404 chr3R 15790585 15790610 13 206 8.0 21.5 14.8 0.8 231 chr3R 15790379 exon c(3)G - chr3R 15790494 exon c(3)G - chr3R 15790610 exon c(3)G - chr3R_13_15790001 chr3R_15790001 RAL-796 1392 chr3R 15790837 15790872 chr3R 15790953 15790988 23 116 18.0 20.0 19.0 1.1 151 chr3R 15790837 exon c(3)G - chr3R 15790912 intron c(3)G - chr3R 15790988 exon c(3)G - chr3R_23_15790001 chr3R_15790001 RAL-796 1393 chr3R 15871413 15871433 chr3R 15871512 15871522 5 95 2.5 3.5 3.0 1.2 109 chr3R 15871413 intron CG31183 - chr3R 15871468 intron CG31183 - chr3R 15871522 intron CG31183 - chr3R_5_15870001 chr3R_15870001 RAL-796 1394 chr3R 15891665 15891686 chr3R 15892057 15892078 9 391 1.5 2.5 2.0 3.0 413 chr3R 15891665 intron CG14877 - chr3R 15891872 intron CG14877 - chr3R 15892078 intron CG14877 - chr3R_9_15890001 chr3R_15890001 RAL-796 1395 chr3R 15892651 15892682 chr3R 15892732 15892763 9 81 2.5 0.5 1.5 3.6 112 chr3R 15892651 intron CG14877 - chr3R 15892707 intron CG14877 - chr3R 15892763 intron CG14877 - chr3R_9_15890001 chr3R_15890001 RAL-796 1396 chr3R 16023860 16023875 chr3R 16023937 16023950 5 77 1.0 1.5 1.2 2.3 90 chr3R 16023860 intergenic not near genes chr3R 16023905 intergenic not near genes chr3R 16023950 intergenic not near genes chr3R_5_16020001 chr3R_16020001 RAL-796 1397 chr3R 16246522 16246552 chr3R 16246598 16246628 4 76 0.0 2.0 1.0 2.0 106 chr3R 16246522 intron tara + chr3R 16246575 intron tara + chr3R 16246628 intron tara + chr3R_4_16245001 chr3R_16245001 RAL-796 1398 chr3R 16260840 16260960 chr3R 16260920 16261058 5 91 1.0 1.0 1.0 2.5 218 chr3R 16260840 intergenic not near genes chr3R 16260949 intergenic bor - chr3R 16261058 intergenic bor - chr3R_5_16260001 chr3R_16260001 RAL-796 1399 chr3R 16284894 16284921 chr3R 16284973 16285000 10 78 4.5 4.5 4.5 1.8 106 chr3R 16284894 intron gish + chr3R 16284947 intron gish + chr3R 16285000 intron gish + chr3R_10_16280001 chr3R_16280001 RAL-796 1400 chr3R 16576645 16576663 chr3R 16576828 16576846 7 183 0.0 3.5 1.8 2.5 201 chr3R 16576645 intron Scp2 - chr3R 16576746 intron Scp2 - chr3R 16576846 intron Scp2 - chr3R_7_16575001 chr3R_16575001 RAL-796 1401 chr3R 16756317 16756349 chr3R 16762508 16762520 diver 11 6189 2.0 0.0 1.0 5.5 6203 chr3R 16756317 intron bxd - chr3R 16759418 intron bxd - chr3R 16762520 intron bxd - chr3R_11_16755001 chr3R_16755001 RAL-796 1402 chr3R 16860334 16860365 chr3R 16860412 16860443 4 78 1.0 0.5 0.8 2.2 109 chr3R 16860334 intron iab-8 - chr3R 16860388 intron iab-8 - chr3R 16860443 intron iab-8 - chr3R_4_16860001 chr3R_16860001 RAL-796 1403 chr3R 16961201 16961228 chr3R 16961289 16961316 5 89 4.0 0.5 2.2 1.6 115 chr3R 16961201 intron Abd-B - chr3R 16961258 intron Abd-B - chr3R 16961316 intron Abd-B - chr3R_5_16960001 chr3R_16960001 RAL-796 1404 chr3R 17282725 17282758 chr3R 17282875 17282909 7 151 1.0 1.0 1.0 3.5 184 chr3R 17282725 intergenic not near genes chr3R 17282817 intergenic not near genes chr3R 17282909 intergenic not near genes chr3R_7_17280001 chr3R_17280001 RAL-796 1405 chr3R 17294683 17294697 chr3R 17295109 17295125 BS 5 428 1.5 3.0 2.2 1.6 442 chr3R 17294683 intergenic not near genes chr3R 17294904 intergenic not near genes chr3R 17295125 intergenic not near genes chr3R_5_17290001 chr3R_17290001 RAL-796 1406 chr3R 17346700 17346714 chr3R 17348263 17348277 F-element 4 1563 0.5 5.0 2.8 1.1 1577 chr3R 17346700 intron beat-IIa - chr3R 17347488 intron beat-IIa - chr3R 17348277 intron beat-IIa - chr3R_4_17345001 chr3R_17345001 RAL-796 1407 chr3R 17389054 17389054 chr3R 21907534 21907535 4 4518480 6.0 24.0 15.0 0.2 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-796 1408 chr3R 17461197 17461231 chr3R 17461279 17461313 14 82 1.5 2.5 2.0 4.7 116 chr3R 17461197 intergenic not near genes chr3R 17461255 intergenic not near genes chr3R 17461313 intergenic not near genes chr3R_14_17460001 chr3R_17460001 RAL-796 1409 chr3R 17498849 17498871 chr3R 17498991 17499013 4 142 1.5 2.5 2.0 1.3 164 chr3R 17498849 intron Dscam3 - chr3R 17498931 intron Dscam3 - chr3R 17499013 intron Dscam3 - chr3R_4_17495001 chr3R_17495001 RAL-796 1410 chr3R 17517682 17517706 chr3R 17517760 17517784 9 77 2.0 8.0 5.0 1.5 102 chr3R 17517682 intergenic not near genes chr3R 17517733 intergenic CR44349 - chr3R 17517784 intergenic CR44349 - chr3R_9_17515001 chr3R_17515001 RAL-796 1411 chr3R 17521579 17521590 chr3R 17521727 17521749 4 156 1.0 4.5 2.8 1.1 170 chr3R 17521579 intergenic not near genes chr3R 17521664 intergenic not near genes chr3R 17521749 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-796 1412 chr3R 17591289 17591300 chr3R 17591725 17591734 F-element 4 435 6.5 2.5 4.5 0.7 445 chr3R 17591289 intergenic not near genes chr3R 17591512 intergenic not near genes chr3R 17591734 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-796 1413 chr3R 17592429 17592453 chr3R 17592515 17592542 7 86 3.0 2.5 2.8 1.8 113 chr3R 17592429 intergenic not near genes chr3R 17592486 intergenic not near genes chr3R 17592542 intergenic not near genes chr3R_7_17590001 chr3R_17590001 RAL-796 1414 chr3R 17764099 17764113 chr3R 17764187 17764201 4 88 2.5 0.0 1.2 1.8 102 chr3R 17764099 intergenic not near genes chr3R 17764150 intergenic not near genes chr3R 17764201 intergenic not near genes chr3R_4_17760001 chr3R_17760001 RAL-796 1415 chr3R 17797860 17797887 chr3R 17800071 17800096 12 2210 25.5 33.0 29.2 0.4 2236 chr3R 17797860 exon CG7379 - chr3R 17798978 3` UTR CG17803 - chr3R 17800096 exon CG17803 - chr3R_12_17795001 chr3R_17795001 RAL-796 1416 chr3R 17895345 17895371 chr3R 17895434 17895462 5 90 1.5 0.0 0.8 2.8 117 chr3R 17895345 intron Rim - chr3R 17895404 intron Rim - chr3R 17895462 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-796 1417 chr3R 17899092 17899108 chr3R 17899170 17899186 4 78 0.5 1.0 0.8 2.2 94 chr3R 17899092 intron Rim - chr3R 17899139 intron Rim - chr3R 17899186 intron Rim - chr3R_4_17895001 chr3R_17895001 RAL-796 1418 chr3R 17925861 17925889 chr3R 17927327 17927355 hobo 8 1466 4.0 8.0 6.0 1.1 1494 chr3R 17925861 intron cpo + chr3R 17926608 intron cpo + chr3R 17927355 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-796 1419 chr3R 17955276 17955297 chr3R 17955353 17955374 7 77 3.0 3.0 3.0 1.8 98 chr3R 17955276 intron cpo + chr3R 17955325 intron cpo + chr3R 17955374 intron cpo + chr3R_7_17955001 chr3R_17955001 RAL-796 1420 chr3R 18061581 18061607 chr3R 18063149 18063175 F-element 5 1568 3.0 1.5 2.2 1.6 1594 chr3R 18061581 intergenic not near genes chr3R 18062378 intergenic not near genes chr3R 18063175 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-796 1421 chr3R 4904879 4904884 chr3R 18214585 18214591 4 13309706 14.0 9.0 11.5 0.3 13309712 chr3R 4904879 intergenic not near genes chr3R 11559735 3` UTR CG10898 + chr3R 18214591 3` UTR CG7985 + chr3R_4_11555001 chr3R_11555001 RAL-796 1422 chr3R 18281403 18281432 chr3R 18281479 18281508 9 76 4.5 4.5 4.5 1.6 105 chr3R 18281403 intron eIF-1A + chr3R 18281456 intron eIF-1A + chr3R 18281508 intron eIF-1A + chr3R_9_18280001 chr3R_18280001 RAL-796 1423 chr3R 18338997 18339011 chr3R 18339101 18339115 4 104 0.5 2.0 1.2 1.8 118 chr3R 18338997 intron CG15803 - chr3R 18339056 intron CG15803 - chr3R 18339115 intron CG15803 - chr3R_4_18335001 chr3R_18335001 RAL-796 1424 chr3R 18462977 18462999 chr3R 18463056 18463079 4 80 1.0 1.0 1.0 2.0 102 chr3R 18462977 intron fru - chr3R 18463028 intron fru - chr3R 18463079 intron fru - chr3R_4_18460001 chr3R_18460001 RAL-796 1425 chr3R 18501592 18501623 chr3R 18501673 18501704 9 81 1.0 4.5 2.8 2.4 112 chr3R 18501592 intron fru - chr3R 18501648 intron fru - chr3R 18501704 intron fru - chr3R_9_18500001 chr3R_18500001 RAL-796 1426 chr3R 18567612 18567623 chr3R 18567702 18567713 4 90 3.5 3.0 3.2 1.0 101 chr3R 18567612 intergenic not near genes chr3R 18567662 intergenic not near genes chr3R 18567713 intergenic not near genes chr3R_4_18565001 chr3R_18565001 RAL-796 1427 chr3R 18606504 18606528 chr3R 18610736 18610760 F-element 5 4232 1.0 2.0 1.5 2.0 4256 chr3R 18606504 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610760 intron,intron qin +,CG14304 - chr3R_5_18605001 chr3R_18605001 RAL-796 1428 chr3R 18695759 18695774 chr3R 18695843 18695858 5 84 3.0 0.0 1.5 2.0 99 chr3R 18695759 3` UTR CG34282 + chr3R 18695808 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_5_18695001 chr3R_18695001 RAL-796 1429 chr3R 18730027 18730037 chr3R 18730102 18730113 4 76 2.5 4.5 3.5 0.9 86 chr3R 18730027 intron Cha + chr3R 18730070 intron Cha + chr3R 18730113 exon Cha + chr3R_4_18730001 chr3R_18730001 RAL-796 1430 chr3R 18785872 18785896 chr3R 18785949 18785973 10 77 3.5 2.5 3.0 2.5 101 chr3R 18785872 intron CG7720 - chr3R 18785922 intron CG7720 - chr3R 18785973 intron CG7720 - chr3R_10_18785001 chr3R_18785001 RAL-796 1431 chr3R 18788903 18788935 chr3R 18788983 18789016 12 80 4.0 3.5 3.8 2.5 113 chr3R 18788903 intron CG7720 - chr3R 18788960 intron CG7720 - chr3R 18789016 intron CG7720 - chr3R_12_18785001 chr3R_18785001 RAL-796 1432 chr3R 18812079 18812107 chr3R 18812156 18812185 13 78 1.5 4.5 3.0 3.2 106 chr3R 18812079 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812185 intron CG18208 - chr3R_13_18810001 chr3R_18810001 RAL-796 1433 chr3R 18863171 18863187 chr3R 18863257 18863273 5 86 0.0 3.5 1.8 1.8 102 chr3R 18863171 intergenic not near genes chr3R 18863222 intergenic not near genes chr3R 18863273 intergenic not near genes chr3R_5_18860001 chr3R_18860001 RAL-796 1434 chr3R 18916209 18916220 chr3R 18916464 18916475 6 255 1.5 3.5 2.5 1.7 266 chr3R 18916209 intron Xrp1 + chr3R 18916342 intron Xrp1 + chr3R 18916475 intron Xrp1 + chr3R_6_18915001 chr3R_18915001 RAL-796 1435 chr3R 19013020 19013052 chr3R 19013104 19013136 9 84 1.0 1.5 1.2 4.1 116 chr3R 19013020 intron gukh + chr3R 19013078 intron gukh + chr3R 19013136 intron gukh + chr3R_9_19010001 chr3R_19010001 RAL-796 1436 chr3R 19106820 19106832 chr3R 19106910 19106913 7 88 6.5 0.0 3.2 1.7 93 chr3R 19106820 intron CG6040 + chr3R 19106866 intron CG6040 + chr3R 19106913 intron CG6040 + chr3R_7_19105001 chr3R_19105001 RAL-796 1437 chr3R 19109224 19109251 chr3R 19109335 19109362 8 111 1.0 1.5 1.2 3.6 138 chr3R 19109224 intron CG6040 + chr3R 19109293 intron CG6040 + chr3R 19109362 intron CG6040 + chr3R_8_19105001 chr3R_19105001 RAL-796 1438 chr3R 19117062 19117075 chr3R 19117206 19117217 6 144 10.5 0.0 5.2 1.0 155 chr3R 19117062 intron CG6040 + chr3R 19117140 intron CG6040 + chr3R 19117217 intron CG6040 + chr3R_6_19115001 chr3R_19115001 RAL-796 1439 chr3R 19340403 19340423 chr3R 19340480 19340500 7 75 0.5 3.0 1.8 2.5 97 chr3R 19340403 intergenic not near genes chr3R 19340452 intergenic not near genes chr3R 19340500 intergenic not near genes chr3R_7_19340001 chr3R_19340001 RAL-796 1440 chr3R 19417810 19417846 chr3R 19417948 19417982 8 129 1.0 1.5 1.2 3.6 172 chr3R 19417810 intron CG31221 + chr3R 19417896 intron CG31221 + chr3R 19417982 intron CG31221 + chr3R_8_19415001 chr3R_19415001 RAL-796 1441 chr3R 19505932 19505967 chr3R 19506031 19506066 16 98 4.5 2.0 3.2 3.8 134 chr3R 19505932 exon Dys + chr3R 19505999 intron Dys + chr3R 19506066 intron Dys + chr3R_16_19505001 chr3R_19505001 RAL-796 1442 chr3R 19555193 19555221 chr3R 19555395 19555423 12 202 2.0 3.0 2.5 3.4 230 chr3R 19555193 intron Dys + chr3R 19555308 intron Dys + chr3R 19555423 intron Dys + chr3R_12_19555001 chr3R_19555001 RAL-796 1443 chr3R 19602582 19602598 chr3R 19602662 19602678 9 79 2.0 0.5 1.2 4.1 96 chr3R 19602582 exon CG7333 + chr3R 19602630 intergenic CG7333 + chr3R 19602678 intergenic CG7333 + chr3R_9_19600001 chr3R_19600001 RAL-796 1444 chr3R 19716218 19716231 chr3R 19716295 19716308 4 76 0.0 0.0 0.0 4.0 90 chr3R 19716218 intergenic CG34286 - chr3R 19716263 intergenic CG34286 - chr3R 19716308 intergenic CG34286 - chr3R_4_19715001 chr3R_19715001 RAL-796 1445 chr3R 19825872 19825901 chr3R 19825980 19826009 9 108 2.5 1.5 2.0 3.0 137 chr3R 19825872 intron bnl - chr3R 19825940 intron bnl - chr3R 19826009 intron bnl - chr3R_9_19825001 chr3R_19825001 RAL-796 1446 chr3R 20008828 20008852 chr3R 20008909 20008932 10 81 2.0 5.5 3.8 2.1 104 chr3R 20008828 intergenic MED25 +,Hs6st - chr3R 20008880 intergenic MED25 +,Hs6st - chr3R 20008932 intergenic MED25 +,Hs6st - chr3R_10_20005001 chr3R_20005001 RAL-796 1447 chr3R 20060630 20060646 chr3R 20060713 20060729 7 83 7.0 5.5 6.2 1.0 99 chr3R 20060630 intergenic not near genes chr3R 20060680 intergenic not near genes chr3R 20060729 intergenic not near genes chr3R_7_20060001 chr3R_20060001 RAL-796 1448 chr3R 20109541 20109571 chr3R 20114747 20114777 copia 8 5206 0.5 2.5 1.5 3.2 5236 chr3R 20109541 intergenic not near genes chr3R 20112159 intergenic not near genes chr3R 20114777 intergenic CG10887 + chr3R_8_20110001 chr3R_20110001 RAL-796 1449 chr3R 20156696 20156717 chr3R 20165866 20165887 roo 8 9169 2.0 2.5 2.2 2.5 9191 chr3R 20156696 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165887 intergenic not near genes chr3R_8_20160001 chr3R_20160001 RAL-796 1450 chr3R 20180712 20180725 chr3R 20180797 20180810 5 85 0.5 3.5 2.0 1.7 98 chr3R 20180712 intergenic not near genes chr3R 20180761 intergenic not near genes chr3R 20180810 intergenic not near genes chr3R_5_20180001 chr3R_20180001 RAL-796 1451 chr3R 20209801 20209833 chr3R 20209887 20209919 5 86 0.5 1.0 0.8 2.8 118 chr3R 20209801 intron Nlg4 + chr3R 20209860 intron Nlg4 + chr3R 20209919 intron Nlg4 + chr3R_5_20205001 chr3R_20205001 RAL-796 1452 chr3R 20252226 20252252 chr3R 20252304 20252330 5 78 0.0 0.0 0.0 5.0 104 chr3R 20252226 intergenic not near genes chr3R 20252278 intergenic cic + chr3R 20252330 intergenic cic + chr3R_5_20250001 chr3R_20250001 RAL-796 1453 chr3R 20266514 20266539 chr3R 20272985 20273010 Burdock 8 6471 2.5 1.5 2.0 2.7 6496 chr3R 20266514 intron cic + chr3R 20269762 intron cic + chr3R 20273010 intron cic + chr3R_8_20265001 chr3R_20265001 RAL-796 1454 chr3R 20282276 20282307 chr3R 20282352 20282383 5 76 0.5 1.5 1.0 2.5 107 chr3R 20282276 intron cic + chr3R 20282330 intron cic + chr3R 20282383 intron cic + chr3R_5_20280001 chr3R_20280001 RAL-796 1455 chr3R 20312870 20312882 chr3R 20312956 20312968 4 86 3.0 2.0 2.5 1.1 98 chr3R 20312870 intron CG42668 + chr3R 20312919 intron CG42668 + chr3R 20312968 intron CG42668 + chr3R_4_20310001 chr3R_20310001 RAL-796 1456 chr3R 20367370 20367377 chr3R 20367446 20367453 5 75 2.5 1.5 2.0 1.7 83 chr3R 20367370 intergenic not near genes chr3R 20367412 intergenic not near genes chr3R 20367453 intergenic not near genes chr3R_5_20365001 chr3R_20365001 RAL-796 1457 chr3R 20419772 20419796 chr3R 20419849 20419873 13 76 2.0 5.0 3.5 2.9 101 chr3R 20419772 intron Gfrl - chr3R 20419822 intron Gfrl - chr3R 20419873 intron Gfrl - chr3R_13_20415001 chr3R_20415001 RAL-796 1458 chr3R 20489025 20489032 chr3R 20489101 20489108 4 76 4.5 0.0 2.2 1.2 83 chr3R 20489025 intergenic not near genes chr3R 20489066 intergenic not near genes chr3R 20489108 intergenic not near genes chr3R_4_20485001 chr3R_20485001 RAL-796 1459 chr3R 20499870 20499894 chr3R 20499959 20499984 7 89 4.5 3.5 4.0 1.4 114 chr3R 20499870 intergenic Dic2 - chr3R 20499927 intergenic Dic2 - chr3R 20499984 intergenic Dic2 - chr3R_7_20495001 chr3R_20495001 RAL-796 1460 chr3R 20516546 20516550 chr3R 20516902 20516906 4 356 6.0 3.0 4.5 0.7 360 chr3R 20516546 intergenic not near genes chr3R 20516726 intergenic not near genes chr3R 20516906 intergenic not near genes chr3R_4_20515001 chr3R_20515001 RAL-796 1461 chr3R 20545980 20546005 chr3R 20546065 20546090 10 85 3.5 4.5 4.0 2.0 110 chr3R 20545980 intron Stat92E - chr3R 20546035 intron Stat92E - chr3R 20546090 intron Stat92E - chr3R_10_20545001 chr3R_20545001 RAL-796 1462 chr3R 20555508 20555539 chr3R 20555817 20555848 14 307 4.5 1.5 3.0 3.5 340 chr3R 20555508 intron att-ORFA - chr3R 20555678 intron att-ORFA - chr3R 20555848 intron att-ORFA - chr3R_14_20555001 chr3R_20555001 RAL-796 1463 chr3R 20703483 20703509 chr3R 20703877 20703903 7 394 0.0 1.0 0.5 4.7 420 chr3R 20703483 intron Oamb - chr3R 20703693 intron Oamb - chr3R 20703903 intron Oamb - chr3R_7_20700001 chr3R_20700001 RAL-796 1464 chr3R 20707747 20707773 chr3R 20707962 20707988 8 215 2.0 2.0 2.0 2.7 241 chr3R 20707747 intron Oamb - chr3R 20707868 intron Oamb - chr3R 20707988 intron Oamb - chr3R_8_20705001 chr3R_20705001 RAL-796 1465 chr3R 20716814 20716826 chr3R 20717151 20717163 7 337 5.0 4.0 4.5 1.3 349 chr3R 20716814 intergenic not near genes chr3R 20716988 intergenic not near genes chr3R 20717163 intergenic not near genes chr3R_7_20715001 chr3R_20715001 RAL-796 1466 chr3R 20716830 20716842 chr3R 20717150 20717179 6 334 2.0 4.0 3.0 1.5 349 chr3R 20716830 intergenic not near genes chr3R 20717004 intergenic not near genes chr3R 20717179 intergenic not near genes chr3R_6_20715001 chr3R_20715001 RAL-796 1467 chr3R 20733760 20733790 chr3R 20733852 20733882 9 91 5.0 2.5 3.8 1.9 122 chr3R 20733760 intergenic not near genes chr3R 20733821 intergenic not near genes chr3R 20733882 intergenic not near genes chr3R_9_20730001 chr3R_20730001 RAL-796 1468 chr3R 20764416 20764443 chr3R 20764512 20764539 7 94 3.0 2.5 2.8 1.8 123 chr3R 20764416 intron Syp + chr3R 20764478 intron Syp + chr3R 20764539 intron Syp + chr3R_7_20760001 chr3R_20760001 RAL-796 1469 chr3R 20767505 20767539 chr3R 20767599 20767634 7 95 4.5 3.0 3.8 1.5 129 chr3R 20767505 intron Syp + chr3R 20767570 intron Syp + chr3R 20767634 intron Syp + chr3R_7_20765001 chr3R_20765001 RAL-796 1470 chr3R 20787441 20787454 chr3R 20787532 20787545 6 91 6.5 2.5 4.5 1.1 104 chr3R 20787441 intron Syp + chr3R 20787493 intron Syp + chr3R 20787545 intron Syp + chr3R_6_20785001 chr3R_20785001 RAL-796 1471 chr3R 20854483 20854507 chr3R 20859273 20859297 Doc 5 4790 7.0 3.0 5.0 0.8 4814 chr3R 20854483 intron Ir93a - chr3R 20856890 intron Ir93a - chr3R 20859297 exon Ir93a - chr3R_5_20855001 chr3R_20855001 RAL-796 1472 chr3R 20865824 20865858 chr3R 20865905 20865938 8 81 2.0 3.5 2.8 2.1 114 chr3R 20865824 intron CG3822 - chr3R 20865881 intron CG3822 - chr3R 20865938 exon CG3822 - chr3R_8_20865001 chr3R_20865001 RAL-796 1473 chr3R 20942815 20942841 chr3R 20942891 20942914 7 76 0.5 1.5 1.0 3.5 99 chr3R 20942815 intron CG31191 - chr3R 20942864 intron CG31191 - chr3R 20942914 intron CG31191 - chr3R_7_20940001 chr3R_20940001 RAL-796 1474 chr3R 20952773 20952801 chr3R 20952854 20952882 5 80 5.5 3.0 4.2 1.0 109 chr3R 20952773 intron Atpalpha + chr3R 20952828 intron Atpalpha + chr3R 20952882 intron Atpalpha + chr3R_5_20950001 chr3R_20950001 RAL-796 1475 chr3R 20956961 20956965 chr3R 20957039 20957041 6 78 4.0 3.5 3.8 1.2 80 chr3R 20956961 intron Atpalpha + chr3R 20957001 intron Atpalpha + chr3R 20957041 intron Atpalpha + chr3R_6_20955001 chr3R_20955001 RAL-796 1476 chr3R 20981976 20981997 chr3R 20984483 20984504 7 2507 31.5 5.0 18.2 0.4 2528 chr3R 20981976 intron Calx + chr3R 20983240 intron Calx + chr3R 20984504 intron Calx + chr3R_7_20980001 chr3R_20980001 RAL-796 1477 chr3R 20990723 20990742 chr3R 20990805 20990824 9 82 2.0 2.5 2.2 2.8 101 chr3R 20990723 intron Calx + chr3R 20990774 intron Calx + chr3R 20990824 intron Calx + chr3R_9_20990001 chr3R_20990001 RAL-796 1478 chr3R 21015264 21015299 chr3R 21015351 21015386 12 87 0.5 2.5 1.5 4.8 122 chr3R 21015264 3` UTR Calx + chr3R 21015325 3` UTR Calx + chr3R 21015386 3` UTR Calx + chr3R_12_21015001 chr3R_21015001 RAL-796 1479 chr3R 21067553 21067566 chr3R 21067703 21067716 4 150 1.5 1.0 1.2 1.8 163 chr3R 21067553 intron AnxB9 + chr3R 21067634 intron AnxB9 + chr3R 21067716 intron AnxB9 + chr3R_4_21065001 chr3R_21065001 RAL-796 1480 chr3R 21108039 21108065 chr3R 21108300 21108326 6 261 2.5 1.0 1.8 2.1 287 chr3R 21108039 intergenic Sec15 -,rtet + chr3R 21108182 intergenic Sec15 -,rtet + chr3R 21108326 intergenic rtet +,Sec15 - chr3R_6_21105001 chr3R_21105001 RAL-796 1481 chr3R 21141679 21141706 chr3R 21150159 21150186 Tirant 4 8480 3.5 2.5 3.0 1.0 8507 chr3R 21141679 intron SNF4Agamma + chr3R 21145932 intron SNF4Agamma + chr3R 21150186 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-796 1482 chr3R 21154551 21154583 chr3R 21154754 21154798 5 213 4.0 0.0 2.0 1.7 247 chr3R 21154551 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154798 intron SNF4Agamma + chr3R_5_21150001 chr3R_21150001 RAL-796 1483 chr3R 21210134 21210158 chr3R 21210210 21210234 8 76 1.0 2.0 1.5 3.2 100 chr3R 21210134 intron SNF4Agamma + chr3R 21210184 intron SNF4Agamma + chr3R 21210234 intron SNF4Agamma + chr3R_8_21210001 chr3R_21210001 RAL-796 1484 chr3R 21343824 21343842 chr3R 21343917 21343934 4 93 2.0 1.5 1.8 1.4 110 chr3R 21343824 intron CG16791 - chr3R 21343879 intron CG16791 - chr3R 21343934 intron CG16791 - chr3R_4_21340001 chr3R_21340001 RAL-796 1485 chr3R 21451012 21451034 chr3R 21451106 21451128 4 94 0.0 2.0 1.0 2.0 116 chr3R 21451012 intergenic not near genes chr3R 21451070 intergenic not near genes chr3R 21451128 intergenic not near genes chr3R_4_21450001 chr3R_21450001 RAL-796 1486 chr3R 21472011 21472029 chr3R 21472092 21472110 8 80 1.0 2.5 1.8 2.9 99 chr3R 21472011 intergenic not near genes chr3R 21472060 intergenic not near genes chr3R 21472110 intergenic not near genes chr3R_8_21470001 chr3R_21470001 RAL-796 1487 chr3R 21586683 21586716 chr3R 21586782 21586815 6 99 3.5 1.0 2.2 1.9 132 chr3R 21586683 intron InR - chr3R 21586749 intron InR - chr3R 21586815 intron InR - chr3R_6_21585001 chr3R_21585001 RAL-796 1488 chr3R 21761122 21761150 chr3R 21768514 21768539 mdg1 7 7390 5.0 2.5 3.8 1.5 7417 chr3R 21761122 exon CG42335 + chr3R 21764830 intron CG42335 + chr3R 21768539 exon CG42335 + chr3R_7_21760001 chr3R_21760001 RAL-796 1489 chr3R 21784860 21784884 chr3R 21784958 21784982 13 98 3.0 0.0 1.5 5.2 122 chr3R 21784860 3` UTR,3` UTR CASK -,CRG - chr3R 21784921 3` UTR,3` UTR CASK -,CRG - chr3R 21784982 3` UTR,3` UTR CASK -,CRG - chr3R_13_21780001 chr3R_21780001 RAL-796 1490 chr3R 21868753 21868763 chr3R 21868831 21868841 5 78 2.0 4.5 3.2 1.2 88 chr3R 21868753 3` UTR,3` UTR Cby +,CG31174 - chr3R 21868797 exon CG31174 - chr3R 21868841 exon CG31174 - chr3R_5_21865001 chr3R_21865001 RAL-796 1491 chr3R 8339246 8339246 chr3R 21907534 21907534 4 13568288 12.0 24.0 18.0 0.2 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-796 1492 chr3R 17389054 17389054 chr3R 21907534 21907534 4 4518480 6.0 24.0 15.0 0.2 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-796 1493 chr3R 21907534 21907534 chr3R 28831801 28831802 11 6924268 23.0 18.5 20.8 0.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_11_25365001 chr3R_25365001 RAL-796 1494 chr3R 8339246 8339247 chr3R 21907535 21907535 15 13568288 12.0 24.5 18.2 0.8 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_15_15120001 chr3R_15120001 RAL-796 1495 chr3R 21907535 21907535 chr3R 28831801 28831802 18 6924266 23.5 18.5 21.0 0.8 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_18_25365001 chr3R_25365001 RAL-796 1496 chr3R 21907536 21907536 chr3R 28831801 28831802 29 6924266 23.5 18.5 21.0 1.3 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_29_25365001 chr3R_25365001 RAL-796 1497 chr3R 21924012 21924038 chr3R 21924100 21924127 4 89 4.5 2.0 3.2 1.0 115 chr3R 21924012 intergenic not near genes chr3R 21924070 intergenic not near genes chr3R 21924127 intergenic not near genes chr3R_4_21920001 chr3R_21920001 RAL-796 1498 chr3R 21952146 21952168 chr3R 21952230 21952253 7 85 0.0 2.0 1.0 3.5 107 chr3R 21952146 intron Eip93F + chr3R 21952200 intron Eip93F + chr3R 21952253 intron Eip93F + chr3R_7_21950001 chr3R_21950001 RAL-796 1499 chr3R 21956120 21956126 chr3R 21956196 21956202 5 76 2.5 9.0 5.8 0.7 82 chr3R 21956120 intron Eip93F + chr3R 21956161 intron Eip93F + chr3R 21956202 intron Eip93F + chr3R_5_21955001 chr3R_21955001 RAL-796 1500 chr3R 22088295 22088333 chr3R 22088388 22088426 16 93 3.0 3.0 3.0 4.0 131 chr3R 22088295 intron CG5778 - chr3R 22088360 intron CG5778 - chr3R 22088426 intron CG5778 - chr3R_16_22085001 chr3R_22085001 RAL-796 1501 chr3R 22292473 22292504 chr3R 22292553 22292584 6 80 1.5 2.0 1.8 2.1 111 chr3R 22292473 intron SKIP + chr3R 22292528 intron SKIP + chr3R 22292584 intron SKIP + chr3R_6_22290001 chr3R_22290001 RAL-796 1502 chr3R 22428594 22428609 chr3R 22428670 22428684 9 75 1.5 5.0 3.2 2.1 90 chr3R 22428594 intron CG13847 - chr3R 22428639 intron CG13847 - chr3R 22428684 intron CG13847 - chr3R_9_22425001 chr3R_22425001 RAL-796 1503 chr3R 22433089 22433105 chr3R 22433189 22433204 7 100 4.5 2.0 3.2 1.7 115 chr3R 22433089 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433204 intron CG13847 - chr3R_7_22430001 chr3R_22430001 RAL-796 1504 chr3R 22437803 22437823 chr3R 22437893 22437913 5 90 1.0 2.0 1.5 2.0 110 chr3R 22437803 intergenic not near genes chr3R 22437858 intergenic not near genes chr3R 22437913 intergenic not near genes chr3R_5_22435001 chr3R_22435001 RAL-796 1505 chr3R 22450544 22450578 chr3R 22453184 22453218 NOF 13 2638 3.5 4.0 3.8 2.7 2674 chr3R 22450544 intron CG34376 + chr3R 22451881 intron CG34376 + chr3R 22453218 intron CG34376 + chr3R_13_22450001 chr3R_22450001 RAL-796 1506 chr3R 22769089 22769115 chr3R 22769166 22769192 8 75 6.5 4.5 5.5 1.2 103 chr3R 22769089 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769140 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769192 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_8_22765001 chr3R_22765001 RAL-796 1507 chr3R 22797760 22797935 chr3R 22797846 22798031 20 92 0.0 0.0 0.0 20.0 271 chr3R 22797760 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798031 intergenic not near genes chr3R_20_22795001 chr3R_22795001 RAL-796 1508 chr3R 22880943 22880959 chr3R 22881081 22881097 5 137 2.0 0.5 1.2 2.3 154 chr3R 22880943 intergenic not near genes chr3R 22881020 intergenic not near genes chr3R 22881097 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-796 1509 chr3R 23034819 23034839 chr3R 23035232 23035252 5 413 1.5 1.0 1.2 2.3 433 chr3R 23034819 intron CG13833 - chr3R 23035036 intron CG13833 - chr3R 23035252 intron CG13833 - chr3R_5_23035001 chr3R_23035001 RAL-796 1510 chr3R 23073658 23073687 chr3R 23073747 23073776 9 87 2.5 3.5 3.0 2.2 118 chr3R 23073658 intron CG13830 - chr3R 23073717 intron CG13830 - chr3R 23073776 intron CG13830 - chr3R_9_23070001 chr3R_23070001 RAL-796 1511 chr3R 23090404 23090428 chr3R 23090487 23090509 8 83 3.5 6.5 5.0 1.3 105 chr3R 23090404 intron CG13830 - chr3R 23090456 intron CG13830 - chr3R 23090509 intron CG13830 - chr3R_8_23090001 chr3R_23090001 RAL-796 1512 chr3R 23091259 23091285 chr3R 23091344 23091370 6 85 4.5 5.0 4.8 1.0 111 chr3R 23091259 intron CG13830 - chr3R 23091314 intron CG13830 - chr3R 23091370 intron CG13830 - chr3R_6_23090001 chr3R_23090001 RAL-796 1513 chr3R 23114166 23114197 chr3R 23114244 23114275 12 78 1.5 1.0 1.2 5.5 109 chr3R 23114166 3` UTR Rassf - chr3R 23114220 3` UTR Rassf - chr3R 23114275 3` UTR Rassf - chr3R_12_23110001 chr3R_23110001 RAL-796 1514 chr3R 23241983 23241988 chr3R 23242294 23242316 4 324 4.0 1.0 2.5 1.1 333 chr3R 23241983 intron CG4467 - chr3R 23242150 intron CG4467 - chr3R 23242316 intron CG4467 - chr3R_4_23240001 chr3R_23240001 RAL-796 1515 chr3R 23363674 23363703 chr3R 23363760 23363789 7 86 5.0 2.0 3.5 1.6 115 chr3R 23363674 intergenic CG4408 - chr3R 23363732 intergenic CG4408 - chr3R 23363789 intergenic CG4408 - chr3R_7_23360001 chr3R_23360001 RAL-796 1516 chr3R 23564455 23564476 chr3R 23564599 23564620 7 144 2.0 4.0 3.0 1.8 165 chr3R 23564455 intron beat-IV + chr3R 23564538 intron beat-IV + chr3R 23564620 intron beat-IV + chr3R_7_23560001 chr3R_23560001 RAL-796 1517 chr3R 23626322 23626350 chr3R 23626421 23626449 9 99 5.5 4.0 4.8 1.6 127 chr3R 23626322 intron CG31145 - chr3R 23626386 intron CG31145 - chr3R 23626449 intron CG31145 - chr3R_9_23625001 chr3R_23625001 RAL-796 1518 chr3R 23944911 23944931 chr3R 23944996 23945016 8 85 3.0 3.5 3.2 1.9 105 chr3R 23944911 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945016 exon CG12268 - chr3R_8_23940001 chr3R_23940001 RAL-796 1519 chr3R 23949045 23949066 chr3R 23949122 23949143 4 74 1.0 1.5 1.2 1.8 98 chr3R 23949045 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949143 intergenic not near genes chr3R_4_23945001 chr3R_23945001 RAL-796 1520 chr3R 23963425 23963437 chr3R 23963508 23963520 5 82 7.0 3.0 5.0 0.8 95 chr3R 23963425 intron CG31140 + chr3R 23963472 intron CG31140 + chr3R 23963520 intron CG31140 + chr3R_5_23960001 chr3R_23960001 RAL-796 1521 chr3R 24014785 24014812 chr3R 24014870 24014897 11 85 3.0 4.0 3.5 2.4 112 chr3R 24014785 intron KrT95D - chr3R 24014841 intron KrT95D - chr3R 24014897 intron KrT95D - chr3R_11_24010001 chr3R_24010001 RAL-796 1522 chr3R 24021625 24021653 chr3R 24021715 24021743 6 90 2.0 1.5 1.8 2.1 118 chr3R 24021625 intron KrT95D - chr3R 24021684 intron KrT95D - chr3R 24021743 intron KrT95D - chr3R_6_24020001 chr3R_24020001 RAL-796 1523 chr3R 24072095 24072099 chr3R 24072523 24072529 jockey 5 434 10.0 0.0 5.0 0.8 434 chr3R 24072095 intron 4EHP - chr3R 24072312 intron 4EHP - chr3R 24072529 intron 4EHP - chr3R_5_24070001 chr3R_24070001 RAL-796 1524 chr3R 24076915 24076938 chr3R 24078382 24078405 hobo 8 1466 4.0 2.0 3.0 2.0 1490 chr3R 24076915 intron 4EHP - chr3R 24077660 intron 4EHP - chr3R 24078405 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RAL-796 1525 chr3R 24100629 24100660 chr3R 24100718 24100750 11 90 0.5 1.0 0.8 6.1 121 chr3R 24100629 intron 4EHP - chr3R 24100690 intron 4EHP - chr3R 24100750 intron 4EHP - chr3R_11_24100001 chr3R_24100001 RAL-796 1526 chr3R 24118899 24118932 chr3R 24119428 24119461 7 529 1.5 2.5 2.0 2.3 562 chr3R 24118899 intron Rootletin + chr3R 24119180 intron Rootletin + chr3R 24119461 intron Rootletin + chr3R_7_24115001 chr3R_24115001 RAL-796 1527 chr3R 24207219 24207237 chr3R 24212295 24212313 flea 8 5076 5.0 4.5 4.8 1.4 5094 chr3R 24207219 intron twin - chr3R 24209766 intron twin - chr3R 24212313 intron twin - chr3R_8_24205001 chr3R_24205001 RAL-796 1528 chr3R 21907534 21907536 chr3R 24389465 24389465 6 2481930 23.5 4.5 14.0 0.4 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_6_23145001 chr3R_23145001 RAL-796 1529 chr3R 24424658 24424670 chr3R 24424804 24424815 4 146 4.0 0.5 2.2 1.2 157 chr3R 24424658 intron nAChRalpha1 - chr3R 24424736 intron nAChRalpha1 - chr3R 24424815 intron nAChRalpha1 - chr3R_4_24420001 chr3R_24420001 RAL-796 1530 chr3R 24426287 24426315 chr3R 24426544 24426572 15 257 5.5 2.5 4.0 3.0 285 chr3R 24426287 intron nAChRalpha1 - chr3R 24426430 intron nAChRalpha1 - chr3R 24426572 intron nAChRalpha1 - chr3R_15_24425001 chr3R_24425001 RAL-796 1531 chr3R 24431600 24431617 chr3R 24431679 24431696 4 78 6.0 0.0 3.0 1.0 96 chr3R 24431600 intron nAChRalpha1 - chr3R 24431648 intron nAChRalpha1 - chr3R 24431696 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-796 1532 chr3R 24447747 24447753 chr3R 24447834 24447840 6 87 0.0 2.5 1.2 2.7 93 chr3R 24447747 intron nAChRalpha1 - chr3R 24447794 intron nAChRalpha1 - chr3R 24447840 intron nAChRalpha1 - chr3R_6_24445001 chr3R_24445001 RAL-796 1533 chr3R 24493063 24493088 chr3R 24493149 24493174 7 86 2.5 1.0 1.8 2.5 111 chr3R 24493063 intergenic not near genes chr3R 24493118 intergenic not near genes chr3R 24493174 intergenic not near genes chr3R_7_24490001 chr3R_24490001 RAL-796 1534 chr3R 24495289 24495313 chr3R 24495368 24495392 9 79 5.5 1.5 3.5 2.0 103 chr3R 24495289 intergenic not near genes chr3R 24495340 intergenic not near genes chr3R 24495392 intergenic not near genes chr3R_9_24495001 chr3R_24495001 RAL-796 1535 chr3R 24670167 24670189 chr3R 24670251 24670273 5 84 2.0 0.5 1.2 2.3 106 chr3R 24670167 intron slo + chr3R 24670220 intron slo + chr3R 24670273 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-796 1536 chr3R 24730093 24730116 chr3R 24732471 24732494 Doc 6 2376 3.5 0.0 1.8 2.1 2401 chr3R 24730093 intron tok + chr3R 24731294 intron tok + chr3R 24732494 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-796 1537 chr3R 24974912 24974934 chr3R 24974991 24975013 7 79 3.0 5.0 4.0 1.4 101 chr3R 24974912 intergenic not near genes chr3R 24974962 intergenic not near genes chr3R 24975013 intergenic not near genes chr3R_7_24970001 chr3R_24970001 RAL-796 1538 chr3R 24977492 24977513 chr3R 24981355 24981388 10 3866 21.5 13.0 17.2 0.5 3896 chr3R 24977492 intergenic not near genes chr3R 24979440 intergenic not near genes chr3R 24981388 intergenic not near genes chr3R_10_24975001 chr3R_24975001 RAL-796 1539 chr3R 25302133 25302165 chr3R 25302349 25302381 8 216 16.0 6.0 11.0 0.7 248 chr3R 25302133 exon CG13659 + chr3R 25302257 exon CG13659 + chr3R 25302381 intergenic CG13659 +,CG31370 + chr3R_8_25300001 chr3R_25300001 RAL-796 1540 chr3R 25425552 25425566 chr3R 25425671 25425684 5 119 2.0 1.5 1.8 1.8 132 chr3R 25425552 intron Fur1 - chr3R 25425618 intron Fur1 - chr3R 25425684 intron Fur1 - chr3R_5_25425001 chr3R_25425001 RAL-796 1541 chr3R 25454903 25454922 chr3R 25454993 25455012 10 89 2.0 5.0 3.5 2.2 109 chr3R 25454903 intron Fur1 - chr3R 25454958 intron Fur1 - chr3R 25455012 intron Fur1 - chr3R_10_25450001 chr3R_25450001 RAL-796 1542 chr3R 25500793 25500802 chr3R 25500894 25500903 6 101 2.5 3.0 2.8 1.6 110 chr3R 25500793 intergenic not near genes chr3R 25500848 intergenic not near genes chr3R 25500903 intergenic not near genes chr3R_6_25500001 chr3R_25500001 RAL-796 1543 chr3R 25671237 25671264 chr3R 25671335 25671339 7 94 3.0 0.0 1.5 2.8 102 chr3R 25671237 intron Lgr3 + chr3R 25671288 intron Lgr3 + chr3R 25671339 intron Lgr3 + chr3R_7_25670001 chr3R_25670001 RAL-796 1544 chr3R 25759564 25759586 chr3R 25759688 25759710 7 123 3.0 1.5 2.2 2.2 146 chr3R 25759564 intron LpR1 - chr3R 25759637 intron LpR1 - chr3R 25759710 intron LpR1 - chr3R_7_25755001 chr3R_25755001 RAL-796 1545 chr3R 25807743 25807767 chr3R 25807824 25807848 5 81 1.0 1.5 1.2 2.3 105 chr3R 25807743 intergenic CR45652 + chr3R 25807796 intergenic CR45652 + chr3R 25807848 intergenic CR45652 + chr3R_5_25805001 chr3R_25805001 RAL-796 1546 chr3R 25832692 25832712 chr3R 25841874 25841894 roo 6 9182 5.0 2.0 3.5 1.3 9202 chr3R 25832692 exon alpha4GT2 + chr3R 25837293 intron alpha4GT2 + chr3R 25841894 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-796 1547 chr3R 25864849 25864874 chr3R 25865107 25865132 9 258 0.5 5.0 2.8 2.4 283 chr3R 25864849 intron CG5890 + chr3R 25864990 intron CG5890 + chr3R 25865132 intron CG5890 + chr3R_9_25860001 chr3R_25860001 RAL-796 1548 chr3R 26140522 26140543 chr3R 26140634 26140656 4 112 2.5 6.0 4.2 0.8 134 chr3R 26140522 intergenic not near genes chr3R 26140589 intergenic not near genes chr3R 26140656 intergenic not near genes chr3R_4_26140001 chr3R_26140001 RAL-796 1549 chr3R 26144446 26144480 chr3R 26144524 26144558 7 78 2.5 4.0 3.2 1.7 112 chr3R 26144446 intergenic not near genes chr3R 26144502 intergenic not near genes chr3R 26144558 intergenic not near genes chr3R_7_26140001 chr3R_26140001 RAL-796 1550 chr3R 26165328 26165356 chr3R 26165430 26165458 10 101 2.0 3.5 2.8 2.6 130 chr3R 26165328 intergenic not near genes chr3R 26165393 intergenic not near genes chr3R 26165458 intergenic not near genes chr3R_10_26165001 chr3R_26165001 RAL-796 1551 chr3R 26166173 26166209 chr3R 26166259 26166295 9 85 0.0 5.0 2.5 2.6 122 chr3R 26166173 intergenic not near genes chr3R 26166234 intergenic not near genes chr3R 26166295 intergenic not near genes chr3R_9_26165001 chr3R_26165001 RAL-796 1552 chr3R 26239829 26239842 chr3R 26240140 26240153 4 311 0.5 0.5 0.5 2.7 324 chr3R 26239829 intron CR42745 + chr3R 26239991 intron CR42745 + chr3R 26240153 intron CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-796 1553 chr3R 17227312 17227314 chr3R 26242106 26242110 4 9014794 11.0 6.0 8.5 0.4 9014798 chr3R 17227312 intergenic not near genes chr3R 21734711 intergenic not near genes chr3R 26242110 intron CR42745 + chr3R_4_21730001 chr3R_21730001 RAL-796 1554 chr3R 26292104 26292135 chr3R 26292184 26292215 7 80 1.0 2.0 1.5 2.8 111 chr3R 26292104 intergenic not near genes chr3R 26292160 intergenic not near genes chr3R 26292215 intergenic not near genes chr3R_7_26290001 chr3R_26290001 RAL-796 1555 chr3R 26301829 26301848 chr3R 26301910 26301929 9 81 2.5 1.5 2.0 3.0 100 chr3R 26301829 intergenic not near genes chr3R 26301879 intergenic not near genes chr3R 26301929 intergenic not near genes chr3R_9_26300001 chr3R_26300001 RAL-796 1556 chr3R 26302116 26302146 chr3R 26302323 26302353 13 206 3.0 2.0 2.5 3.7 237 chr3R 26302116 intergenic not near genes chr3R 26302234 intergenic not near genes chr3R 26302353 intergenic not near genes chr3R_13_26300001 chr3R_26300001 RAL-796 1557 chr3R 26370343 26370355 chr3R 26370426 26370437 4 83 0.0 4.5 2.2 1.2 94 chr3R 26370343 intergenic not near genes chr3R 26370390 intergenic not near genes chr3R 26370437 intergenic not near genes chr3R_4_26370001 chr3R_26370001 RAL-796 1558 chr3R 26376326 26376356 chr3R 26385486 26385515 roo 7 9159 4.0 0.0 2.0 2.3 9189 chr3R 26376326 intergenic not near genes chr3R 26380920 intergenic not near genes chr3R 26385515 intergenic not near genes chr3R_7_26380001 chr3R_26380001 RAL-796 1559 chr3R 26403993 26404025 chr3R 26405147 26405179 6 1153 1.0 4.0 2.5 1.7 1186 chr3R 26403993 intergenic ppk15 - chr3R 26404586 intergenic not near genes chr3R 26405179 intergenic not near genes chr3R_6_26400001 chr3R_26400001 RAL-796 1560 chr3R 26436970 26436997 chr3R 26437418 26437447 5 445 2.0 2.5 2.2 1.6 477 chr3R 26436970 intergenic not near genes chr3R 26437208 intergenic not near genes chr3R 26437447 intergenic not near genes chr3R_5_26435001 chr3R_26435001 RAL-796 1561 chr3R 26503589 26503600 chr3R 26504329 26504341 8 740 15.0 23.5 19.2 0.4 752 chr3R 26503589 intron plum - chr3R 26503965 intron plum - chr3R 26504341 intron plum - chr3R_8_26500001 chr3R_26500001 RAL-796 1562 chr3R 26510503 26510518 chr3R 26519564 26519578 roo 5 9061 3.5 3.0 3.2 1.2 9075 chr3R 26510503 intron plum - chr3R 26515040 intron plum - chr3R 26519578 intron plum - chr3R_5_26515001 chr3R_26515001 RAL-796 1563 chr3R 26522626 26522655 chr3R 26522712 26522741 9 86 4.0 5.5 4.8 1.6 115 chr3R 26522626 intron plum - chr3R 26522684 intron plum - chr3R 26522741 intron plum - chr3R_9_26520001 chr3R_26520001 RAL-796 1564 chr3R 26558329 26558353 chr3R 26565641 26565665 Stalker4 6 7312 1.5 2.5 2.0 2.0 7336 chr3R 26558329 intron scrib + chr3R 26561997 intron scrib + chr3R 26565665 intron scrib + chr3R_6_26560001 chr3R_26560001 RAL-796 1565 chr3R 26571591 26571621 chr3R 26571669 26571699 11 76 8.5 3.0 5.8 1.6 108 chr3R 26571591 intron scrib + chr3R 26571645 intron scrib + chr3R 26571699 intron scrib + chr3R_11_26570001 chr3R_26570001 RAL-796 1566 chr3R 26607750 26607769 chr3R 26607825 26607845 6 76 3.0 5.5 4.2 1.2 95 chr3R 26607750 5` UTR CR44951 + chr3R 26607798 5` UTR CR44951 + chr3R 26607845 5` UTR CR44951 + chr3R_6_26605001 chr3R_26605001 RAL-796 1567 chr3R 26642733 26642761 chr3R 26643125 26643152 jockey 14 393 6.5 3.0 4.8 2.4 419 chr3R 26642733 intergenic not near genes chr3R 26642942 intergenic not near genes chr3R 26643152 intergenic not near genes chr3R_14_26640001 chr3R_26640001 RAL-796 1568 chr3R 26723915 26723947 chr3R 26724016 26724040 5 94 3.5 0.5 2.0 1.7 125 chr3R 26723915 intron CG6420 - chr3R 26723978 intron CG6420 - chr3R 26724040 intron CG6420 - chr3R_5_26720001 chr3R_26720001 RAL-796 1569 chr3R 26770243 26770274 chr3R 26770320 26770351 10 77 2.5 3.0 2.8 2.6 108 chr3R 26770243 intergenic CR45563 + chr3R 26770297 intergenic CR45563 + chr3R 26770351 intergenic not near genes chr3R_10_26770001 chr3R_26770001 RAL-796 1570 chr3R 26788109 26788130 chr3R 26788220 26788237 6 112 0.0 2.0 1.0 3.0 128 chr3R 26788109 intergenic not near genes chr3R 26788173 intergenic not near genes chr3R 26788237 intergenic not near genes chr3R_6_26785001 chr3R_26785001 RAL-796 1571 chr3R 26806137 26806173 chr3R 26806239 26806277 20 104 1.5 2.0 1.8 7.1 140 chr3R 26806137 intron Tl + chr3R 26806207 intron Tl + chr3R 26806277 intron Tl + chr3R_20_26805001 chr3R_26805001 RAL-796 1572 chr3R 26826269 26826282 chr3R 26826353 26826366 6 84 3.0 3.5 3.2 1.4 97 chr3R 26826269 intron Tl + chr3R 26826318 intron Tl + chr3R 26826366 intron Tl + chr3R_6_26825001 chr3R_26825001 RAL-796 1573 chr3R 26845575 26845605 chr3R 26845655 26845685 14 79 2.0 4.0 3.0 3.5 110 chr3R 26845575 intron Lerp - chr3R 26845630 intron Lerp - chr3R 26845685 intron Lerp - chr3R_14_26845001 chr3R_26845001 RAL-796 1574 chr3R 26991966 26991985 chr3R 26992077 26992096 4 111 2.5 2.0 2.2 1.2 130 chr3R 26991966 intergenic not near genes chr3R 26992031 intergenic not near genes chr3R 26992096 intergenic not near genes chr3R_4_26990001 chr3R_26990001 RAL-796 1575 chr3R 27027693 27027701 chr3R 27027772 27027783 4 81 2.0 4.0 3.0 1.0 90 chr3R 27027693 intron RYa-R + chr3R 27027738 intron RYa-R + chr3R 27027783 intron RYa-R + chr3R_4_27025001 chr3R_27025001 RAL-796 1576 chr3R 27028737 27028753 chr3R 27028816 27028832 4 79 0.5 5.5 3.0 1.0 95 chr3R 27028737 intron RYa-R + chr3R 27028784 intron RYa-R + chr3R 27028832 intron RYa-R + chr3R_4_27025001 chr3R_27025001 RAL-796 1577 chr3R 27030221 27030241 chr3R 27030350 27030370 10 129 3.5 0.0 1.8 3.6 149 chr3R 27030221 intron RYa-R + chr3R 27030296 intron RYa-R + chr3R 27030370 intron RYa-R + chr3R_10_27030001 chr3R_27030001 RAL-796 1578 chr3R 27140513 27140537 chr3R 27148123 27148147 412 12 7609 5.5 3.0 4.2 2.3 7634 chr3R 27140513 intron CG6051 - chr3R 27144330 intron CG6051 - chr3R 27148147 intron CG6051 - chr3R_12_27140001 chr3R_27140001 RAL-796 1579 chr3R 27218711 27218738 chr3R 27218801 27218827 8 88 1.0 3.0 2.0 2.7 116 chr3R 27218711 intergenic not near genes chr3R 27218769 intergenic not near genes chr3R 27218827 intergenic not near genes chr3R_8_27215001 chr3R_27215001 RAL-796 1580 chr3R 27245593 27245615 chr3R 27245683 27245706 9 89 2.0 1.5 1.8 3.2 113 chr3R 27245593 intergenic CG18766 - chr3R 27245650 intergenic CG18766 - chr3R 27245706 intergenic CG18766 - chr3R_9_27245001 chr3R_27245001 RAL-796 1581 chr3R 27275845 27275877 chr3R 27275929 27275961 7 84 1.5 2.0 1.8 2.5 116 chr3R 27275845 intron CG5938 + chr3R 27275903 intron CG5938 + chr3R 27275961 intron CG5938 + chr3R_7_27275001 chr3R_27275001 RAL-796 1582 chr3R 27300863 27300875 chr3R 27300955 27300967 8 92 2.0 4.5 3.2 1.9 104 chr3R 27300863 intron CG3339 - chr3R 27300915 intron CG3339 - chr3R 27300967 intron CG3339 - chr3R_8_27300001 chr3R_27300001 RAL-796 1583 chr3R 27301272 27301306 chr3R 27301358 27301393 10 87 1.0 1.5 1.2 4.5 121 chr3R 27301272 intron CG3339 - chr3R 27301332 intron CG3339 - chr3R 27301393 intron CG3339 - chr3R_10_27300001 chr3R_27300001 RAL-796 1584 chr3R 27329485 27329499 chr3R 27329561 27329576 6 77 2.0 1.0 1.5 2.4 91 chr3R 27329485 intergenic CG3330 - chr3R 27329530 intergenic CG3330 - chr3R 27329576 intergenic CG3330 - chr3R_6_27325001 chr3R_27325001 RAL-796 1585 chr3R 27335949 27335964 chr3R 27336030 27336045 5 81 0.0 0.5 0.2 4.2 96 chr3R 27335949 intergenic not near genes chr3R 27335997 intergenic not near genes chr3R 27336045 intergenic not near genes chr3R_5_27335001 chr3R_27335001 RAL-796 1586 chr3R 27342795 27342819 chr3R 27351376 27351400 Tirant 9 8581 4.5 5.0 4.8 1.6 8605 chr3R 27342795 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351400 intron CG42534 + chr3R_9_27345001 chr3R_27345001 RAL-796 1587 chr3R 27352507 27352514 chr3R 27352785 27352791 5 277 3.5 6.5 5.0 0.8 284 chr3R 27352507 intron CG42534 + chr3R 27352649 intron CG42534 + chr3R 27352791 intron CG42534 + chr3R_5_27350001 chr3R_27350001 RAL-796 1588 chr3R 27404935 27404956 chr3R 27405015 27405035 5 80 2.0 5.0 3.5 1.1 100 chr3R 27404935 intron side - chr3R 27404985 intron side - chr3R 27405035 intron side - chr3R_5_27400001 chr3R_27400001 RAL-796 1589 chr3R 27457872 27457893 chr3R 27457962 27457985 5 91 3.0 1.0 2.0 1.7 113 chr3R 27457872 intergenic not near genes chr3R 27457928 intergenic not near genes chr3R 27457985 intergenic not near genes chr3R_5_27455001 chr3R_27455001 RAL-796 1590 chr3R 27468898 27468920 chr3R 27468981 27469007 8 86 1.0 4.0 2.5 2.3 109 chr3R 27468898 intergenic not near genes chr3R 27468952 intergenic not near genes chr3R 27469007 intergenic not near genes chr3R_8_27465001 chr3R_27465001 RAL-796 1591 chr3R 27492379 27492405 chr3R 27492465 27492492 7 87 2.0 0.5 1.2 3.2 113 chr3R 27492379 intergenic not near genes chr3R 27492436 intergenic not near genes chr3R 27492492 intergenic not near genes chr3R_7_27490001 chr3R_27490001 RAL-796 1592 chr3R 27513044 27513065 chr3R 27513125 27513146 4 81 1.0 2.5 1.8 1.4 102 chr3R 27513044 intergenic not near genes chr3R 27513095 intergenic not near genes chr3R 27513146 intergenic not near genes chr3R_4_27510001 chr3R_27510001 RAL-796 1593 chr3R 27539801 27539830 chr3R 27540094 27540122 13 293 4.5 2.5 3.5 2.9 321 chr3R 27539801 intergenic not near genes chr3R 27539962 intergenic not near genes chr3R 27540122 intergenic not near genes chr3R_13_27535001 chr3R_27535001 RAL-796 1594 chr3R 27544937 27544950 chr3R 27545262 27545272 4 324 1.5 2.5 2.0 1.3 335 chr3R 27544937 exon Gr98c + chr3R 27545104 exon Gr98c + chr3R 27545272 exon Gr98c + chr3R_4_27545001 chr3R_27545001 RAL-796 1595 chr3R 27585410 27585444 chr3R 27585514 27585548 13 104 2.5 2.0 2.2 4.1 138 chr3R 27585410 3` UTR raps + chr3R 27585479 3` UTR raps + chr3R 27585548 3` UTR raps + chr3R_13_27585001 chr3R_27585001 RAL-796 1596 chr3R 27625650 27625680 chr3R 27627400 27627431 10 1746 12.0 12.0 12.0 0.8 1781 chr3R 27625650 intron,intron Tusp +,CG5612 - chr3R 27626540 intron Tusp + chr3R 27627431 intron Tusp + chr3R_10_27625001 chr3R_27625001 RAL-796 1597 chr3R 27625495 27625519 chr3R 27627530 27627553 12 2034 8.0 24.0 16.0 0.7 2058 chr3R 27625495 intron,intron Tusp +,CG5612 - chr3R 27626524 intron Tusp + chr3R 27627553 intron Tusp + chr3R_12_27625001 chr3R_27625001 RAL-796 1598 chr3R 27648607 27648866 chr3R 27648677 27648942 6 77 4.0 0.0 2.0 2.0 335 chr3R 27648607 intron tau - chr3R 27648774 intron tau - chr3R 27648942 intron tau - chr3R_6_27645001 chr3R_27645001 RAL-796 1599 chr3R 27706776 27706807 chr3R 27706853 27706879 8 76 3.0 2.5 2.8 2.1 103 chr3R 27706776 intergenic CG12428 -,CG12877 + chr3R 27706828 intergenic CG12428 -,CG12877 + chr3R 27706879 intergenic CG12428 -,CG12877 + chr3R_8_27705001 chr3R_27705001 RAL-796 1600 chr3R 27725579 27725598 chr3R 27731021 27731040 I-element 5 5442 4.5 4.0 4.2 1.0 5461 chr3R 27725579 intergenic not near genes chr3R 27728310 intergenic not near genes chr3R 27731040 intergenic not near genes chr3R_5_27725001 chr3R_27725001 RAL-796 1601 chr3R 27779277 27779288 chr3R 27779349 27779365 4 76 2.0 6.5 4.2 0.8 88 chr3R 27779277 exon CG34353 - chr3R 27779321 intron CG34353 - chr3R 27779365 intron CG34353 - chr3R_4_27775001 chr3R_27775001 RAL-796 1602 chr3R 27799938 27799963 chr3R 27800020 27800045 14 82 4.0 2.0 3.0 3.5 107 chr3R 27799938 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800045 intron CG34353 - chr3R_14_27795001 chr3R_27795001 RAL-796 1603 chr3R 27829902 27829915 chr3R 27829981 27829981 4 76 4.0 0.0 2.0 1.3 79 chr3R 27829902 intron CG34353 - chr3R 27829942 intron CG34353 - chr3R 27829981 intron CG34353 - chr3R_4_27825001 chr3R_27825001 RAL-796 1604 chr3R 27853205 27853222 chr3R 27853400 27853404 8 193 2.0 4.5 3.2 1.9 199 chr3R 27853205 intron CG34353 - chr3R 27853304 intron CG34353 - chr3R 27853404 intron CG34353 - chr3R_8_27850001 chr3R_27850001 RAL-796 1605 chr3R 27853224 27853235 chr3R 27853397 27853430 6 188 2.0 4.0 3.0 1.5 206 chr3R 27853224 intron CG34353 - chr3R 27853327 intron CG34353 - chr3R 27853430 intron CG34353 - chr3R_6_27850001 chr3R_27850001 RAL-796 1606 chr3R 27856757 27856792 chr3R 27858240 27858275 hopper2 18 1482 2.5 2.5 2.5 5.1 1518 chr3R 27856757 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858275 intron CG34353 - chr3R_18_27855001 chr3R_27855001 RAL-796 1607 chr3R 27862953 27862984 chr3R 27868258 27868288 Transpac 5 5305 2.5 2.0 2.2 1.6 5335 chr3R 27862953 intron CG34353 - chr3R 27865620 intron CG34353 - chr3R 27868288 intron CG34353 - chr3R_5_27865001 chr3R_27865001 RAL-796 1608 chr3R 27875703 27875732 chr3R 27882758 27882787 297 15 7055 2.5 7.5 5.0 2.5 7084 chr3R 27875703 intron CG34353 - chr3R 27879245 intron CG34353 - chr3R 27882787 intron CG34353 - chr3R_15_27875001 chr3R_27875001 RAL-796 1609 chr3R 27991599 27991611 chr3R 27992185 27992197 5 587 4.0 3.5 3.8 1.0 598 chr3R 27991599 intergenic not near genes chr3R 27991898 intergenic not near genes chr3R 27992197 intergenic not near genes chr3R_5_27990001 chr3R_27990001 RAL-796 1610 chr3R 28068490 28068528 chr3R 28073932 28073970 I-element 10 5442 1.0 2.5 1.8 3.6 5480 chr3R 28068490 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073970 intron CG34362 + chr3R_10_28070001 chr3R_28070001 RAL-796 1611 chr3R 28156011 28156043 chr3R 28156349 28156381 12 337 2.5 3.0 2.8 3.2 370 chr3R 28156011 intron CG34354 + chr3R 28156196 intron CG34354 + chr3R 28156381 intron CG34354 + chr3R_12_28155001 chr3R_28155001 RAL-796 1612 chr3R 28173672 28173698 chr3R 28181102 28181128 mdg1 9 7430 2.0 4.5 3.2 2.1 7456 chr3R 28173672 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181128 intron CG34354 + chr3R_9_28175001 chr3R_28175001 RAL-796 1613 chr3R 28215816 28215840 chr3R 28215893 28215917 5 77 3.5 1.5 2.5 1.4 101 chr3R 28215816 intron CG34354 + chr3R 28215866 intron CG34354 + chr3R 28215917 intron CG34354 + chr3R_5_28215001 chr3R_28215001 RAL-796 1614 chr3R 28253347 28253373 chr3R 28255847 28255883 jockey 11 2508 2.0 3.5 2.8 2.9 2536 chr3R 28253347 intergenic not near genes chr3R 28254615 intergenic not near genes chr3R 28255883 intergenic not near genes chr3R_11_28250001 chr3R_28250001 RAL-796 1615 chr3R 28307287 28307322 chr3R 28307488 28307523 15 200 0.0 3.0 1.5 6.0 236 chr3R 28307287 intergenic not near genes chr3R 28307405 intergenic not near genes chr3R 28307523 intergenic not near genes chr3R_15_28305001 chr3R_28305001 RAL-796 1616 chr3R 28309016 28309037 chr3R 28309125 28309153 6 114 1.0 3.5 2.2 1.9 137 chr3R 28309016 intergenic not near genes chr3R 28309084 intergenic not near genes chr3R 28309153 intergenic not near genes chr3R_6_28305001 chr3R_28305001 RAL-796 1617 chr3R 28424254 28424277 chr3R 28424329 28424356 14 79 2.5 2.5 2.5 4.0 102 chr3R 28424254 intron beat-VI + chr3R 28424305 intron beat-VI + chr3R 28424356 intron beat-VI + chr3R_14_28420001 chr3R_28420001 RAL-796 1618 chr3R 28429464 28429633 chr3R 28429549 28429710 10 80 5.0 6.0 5.5 1.5 246 chr3R 28429464 intron beat-VI + chr3R 28429587 intron beat-VI + chr3R 28429710 intron beat-VI + chr3R_10_28425001 chr3R_28425001 RAL-796 1619 chr3R 28479152 28479163 chr3R 28479235 28479246 4 83 3.5 3.0 3.2 1.0 94 chr3R 28479152 intergenic not near genes chr3R 28479199 intergenic not near genes chr3R 28479246 intergenic not near genes chr3R_4_28475001 chr3R_28475001 RAL-796 1620 chr3R 28484353 28484373 chr3R 28486270 28486290 22 1917 27.0 46.5 36.8 0.6 1937 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486290 intergenic CG1894 + chr3R_22_28485001 chr3R_28485001 RAL-796 1621 chr3R 28664050 28664074 chr3R 28666761 28666785 5 2711 15.5 19.0 17.2 0.3 2735 chr3R 28664050 intergenic not near genes chr3R 28665418 intergenic not near genes chr3R 28666785 intergenic not near genes chr3R_5_28665001 chr3R_28665001 RAL-796 1622 chr3R 28663719 28663755 chr3R 28666905 28666939 14 3184 42.0 17.5 29.8 0.5 3220 chr3R 28663719 intergenic not near genes chr3R 28665329 intergenic not near genes chr3R 28666939 intergenic not near genes chr3R_14_28665001 chr3R_28665001 RAL-796 1623 chr3R 28736874 28736907 chr3R 28737091 28737123 12 218 2.5 1.5 2.0 4.0 249 chr3R 28736874 intergenic AstA-R2 - chr3R 28736998 intergenic AstA-R2 - chr3R 28737123 3` UTR AstA-R2 - chr3R_12_28735001 chr3R_28735001 RAL-796 1624 chr3R 28763902 28763922 chr3R 28771345 28771365 Stalker4 5 7443 0.0 0.5 0.2 4.2 7463 chr3R 28763902 intergenic not near genes chr3R 28767634 intergenic not near genes chr3R 28771365 intergenic not near genes chr3R_5_28765001 chr3R_28765001 RAL-796 1625 chr3R 28811568 28811593 chr3R 28811714 28811739 5 146 2.5 1.5 2.0 1.7 171 chr3R 28811568 intergenic wdn - chr3R 28811654 intergenic wdn -,CG1646 + chr3R 28811739 intergenic CG1646 +,wdn - chr3R_5_28810001 chr3R_28810001 RAL-796 1626 chr3R 21907534 21907536 chr3R 28831795 28831801 37 6924266 23.5 18.5 21.0 1.7 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_37_25365001 chr3R_25365001 RAL-796 1627 chr3R 21907534 21907536 chr3R 28831802 28831802 36 6924267 23.5 18.0 20.8 1.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_36_25365001 chr3R_25365001 RAL-796 1628 chr3R 28890216 28890251 chr3R 28890351 28890386 11 134 2.0 4.0 3.0 2.8 170 chr3R 28890216 intron Doa + chr3R 28890301 intron Doa + chr3R 28890386 intron Doa + chr3R_11_28890001 chr3R_28890001 RAL-796 1629 chr3R 29047356 29047367 chr3R 29047435 29047446 5 79 0.5 1.0 0.8 2.8 90 chr3R 29047356 3` UTR Pkc98E + chr3R 29047401 3` UTR Pkc98E + chr3R 29047446 3` UTR Pkc98E + chr3R_5_29045001 chr3R_29045001 RAL-796 1630 chr3R 29070057 29070078 chr3R 29070138 29070159 4 81 1.0 1.5 1.2 1.8 102 chr3R 29070057 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070159 intron CG11873 + chr3R_4_29070001 chr3R_29070001 RAL-796 1631 chr3R 29079400 29079409 chr3R 29080772 29080781 NOF 5 1372 0.0 2.0 1.0 2.5 1381 chr3R 29079400 intron CG11873 + chr3R 29080090 intron CG11873 + chr3R 29080781 intron CG11873 + chr3R_5_29080001 chr3R_29080001 RAL-796 1632 chr3R 29151945 29151966 chr3R 29152037 29152057 7 91 0.0 1.5 0.8 3.9 112 chr3R 29151945 intergenic Slbp -,ligatin - chr3R 29152001 intergenic Slbp -,ligatin - chr3R 29152057 intergenic Slbp -,ligatin - chr3R_7_29150001 chr3R_29150001 RAL-796 1633 chr3R 29182567 29182586 chr3R 29182643 29182662 5 76 0.0 3.0 1.5 2.0 95 chr3R 29182567 intron CG14509 - chr3R 29182614 intron CG14509 - chr3R 29182662 intron CG14509 - chr3R_5_29180001 chr3R_29180001 RAL-796 1634 chr3R 29213059 29213091 chr3R 29213142 29213173 13 83 5.5 1.5 3.5 2.9 114 chr3R 29213059 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213173 intergenic not near genes chr3R_13_29210001 chr3R_29210001 RAL-796 1635 chr3R 29237250 29237283 chr3R 29239269 29239304 10 2018 19.5 3.5 11.5 0.8 2054 chr3R 29237250 exon CG11951 - chr3R 29238277 intron CG11951 - chr3R 29239304 exon CG31427 - chr3R_10_29235001 chr3R_29235001 RAL-796 1636 chr3R 29256265 29256296 chr3R 29256345 29256375 7 80 2.0 1.0 1.5 2.8 110 chr3R 29256265 intergenic CG45544 +,stg - chr3R 29256320 intergenic CG45544 + chr3R 29256375 intergenic CG45544 + chr3R_7_29255001 chr3R_29255001 RAL-796 1637 chr3R 29319828 29319855 chr3R 29320147 29320174 jockey 8 319 0.5 4.5 2.5 2.3 346 chr3R 29319828 intergenic Cnx99A - chr3R 29320001 intergenic Cnx99A - chr3R 29320174 intergenic not near genes chr3R_8_29320001 chr3R_29320001 RAL-796 1638 chr3R 29332297 29332308 chr3R 29332371 29332385 6 76 4.5 1.0 2.8 1.6 88 chr3R 29332297 intergenic not near genes chr3R 29332341 intergenic not near genes chr3R 29332385 intergenic not near genes chr3R_6_29330001 chr3R_29330001 RAL-796 1639 chr3R 29389482 29389514 chr3R 29389562 29389579 10 76 1.5 2.0 1.8 3.6 97 chr3R 29389482 intron Ptp99A + chr3R 29389530 intron Ptp99A + chr3R 29389579 intron Ptp99A + chr3R_10_29385001 chr3R_29385001 RAL-796 1640 chr3R 29406616 29406631 chr3R 29407902 29407917 jockey 4 1286 9.5 4.5 7.0 0.5 1301 chr3R 29406616 intron Ptp99A + chr3R 29407266 intron Ptp99A + chr3R 29407917 intron Ptp99A + chr3R_4_29405001 chr3R_29405001 RAL-796 1641 chr3R 29406633 29406639 chr3R 29407897 29407924 jockey 4 1280 9.0 3.5 6.2 0.6 1291 chr3R 29406633 intron Ptp99A + chr3R 29407278 intron Ptp99A + chr3R 29407924 intron Ptp99A + chr3R_4_29405001 chr3R_29405001 RAL-796 1642 chr3R 29429790 29429806 chr3R 29429868 29429884 8 77 2.0 0.0 1.0 4.0 94 chr3R 29429790 intron Ptp99A + chr3R 29429837 intron Ptp99A + chr3R 29429884 intron Ptp99A + chr3R_8_29425001 chr3R_29425001 RAL-796 1643 chr3R 29447839 29447849 chr3R 29447934 29447955 5 104 2.0 2.0 2.0 1.7 116 chr3R 29447839 intron Ptp99A + chr3R 29447897 intron Ptp99A + chr3R 29447955 intron Ptp99A + chr3R_5_29445001 chr3R_29445001 RAL-796 1644 chr3R 29550256 29550270 chr3R 29550337 29550351 6 80 6.5 4.0 5.2 1.0 95 chr3R 29550256 intergenic not near genes chr3R 29550304 intergenic not near genes chr3R 29550351 intergenic not near genes chr3R_6_29550001 chr3R_29550001 RAL-796 1645 chr3R 29566384 29566416 chr3R 29566461 29566493 9 77 2.0 2.5 2.2 2.8 109 chr3R 29566384 intergenic not near genes chr3R 29566438 intergenic not near genes chr3R 29566493 intergenic not near genes chr3R_9_29565001 chr3R_29565001 RAL-796 1646 chr3R 29590376 29590402 chr3R 29590469 29590494 16 93 1.5 3.0 2.2 5.0 118 chr3R 29590376 intron CG31041 - chr3R 29590435 intron CG31041 - chr3R 29590494 intron CG31041 - chr3R_16_29590001 chr3R_29590001 RAL-796 1647 chr3R 29606084 29606117 chr3R 29606191 29606224 10 105 0.5 2.0 1.2 4.5 140 chr3R 29606084 intron alph + chr3R 29606154 intron alph + chr3R 29606224 intron alph + chr3R_10_29605001 chr3R_29605001 RAL-796 1648 chr3R 29760360 29760389 chr3R 29761561 29761590 pogo 4 1201 1.5 2.0 1.8 1.4 1230 chr3R 29760360 intergenic not near genes chr3R 29760975 intergenic not near genes chr3R 29761590 intergenic not near genes chr3R_4_29760001 chr3R_29760001 RAL-796 1649 chr3R 29881014 29881038 chr3R 29881100 29881124 6 86 1.5 3.5 2.5 1.7 110 chr3R 29881014 intron CG31038 + chr3R 29881069 intron CG31038 + chr3R 29881124 intron CG31038 + chr3R_6_29880001 chr3R_29880001 RAL-796 1650 chr3R 29882023 29882053 chr3R 29891180 29891209 roo 10 9156 4.0 2.5 3.2 2.4 9186 chr3R 29882023 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891209 intron CG31038 + chr3R_10_29885001 chr3R_29885001 RAL-796 1651 chr3R 29927380 29927409 chr3R 29927628 29927657 9 246 1.5 3.0 2.2 2.8 277 chr3R 29927380 5` UTR CG15522 + chr3R 29927518 5` UTR CG15522 + chr3R 29927657 5` UTR CG15522 + chr3R_9_29925001 chr3R_29925001 RAL-796 1652 chr3R 29963480 29963509 chr3R 29963582 29963609 10 101 3.5 5.0 4.2 1.9 129 chr3R 29963480 intron TkR99D - chr3R 29963544 intron TkR99D - chr3R 29963609 intron TkR99D - chr3R_10_29960001 chr3R_29960001 RAL-796 1653 chr3R 30032161 30032178 chr3R 30032240 30032257 6 79 4.0 2.5 3.2 1.4 96 chr3R 30032161 intron Axn + chr3R 30032209 intron Axn + chr3R 30032257 intron Axn + chr3R_6_30030001 chr3R_30030001 RAL-796 1654 chr3R 30105035 30105043 chr3R 30105125 30105133 4 90 0.0 0.0 0.0 4.0 98 chr3R 30105035 intron sima + chr3R 30105084 intron sima + chr3R 30105133 intron sima + chr3R_4_30105001 chr3R_30105001 RAL-796 1655 chr3R 30106393 30106405 chr3R 30106500 30106513 6 107 0.0 2.0 1.0 3.0 120 chr3R 30106393 intron sima + chr3R 30106453 intron sima + chr3R 30106513 intron sima + chr3R_6_30105001 chr3R_30105001 RAL-796 1656 chr3R 30108824 30108857 chr3R 30108926 30108959 16 101 2.5 3.5 3.0 4.0 135 chr3R 30108824 intron sima + chr3R 30108892 intron sima + chr3R 30108959 intron sima + chr3R_16_30105001 chr3R_30105001 RAL-796 1657 chr3R 30112959 30112977 chr3R 30113035 30113053 4 76 3.5 5.0 4.2 0.8 94 chr3R 30112959 intron sima + chr3R 30113006 intron sima + chr3R 30113053 intron sima + chr3R_4_30110001 chr3R_30110001 RAL-796 1658 chr3R 30124961 30124966 chr3R 30125037 30125042 4 76 3.0 6.0 4.5 0.7 81 chr3R 30124961 intergenic CG45073 - chr3R 30125002 intergenic CG45073 - chr3R 30125042 intergenic CG45073 - chr3R_4_30125001 chr3R_30125001 RAL-796 1659 chr3R 30132831 30132853 chr3R 30132918 30132941 13 88 2.5 3.0 2.8 3.4 110 chr3R 30132831 intergenic Tpi -,CG31029 - chr3R 30132886 intergenic Tpi -,CG31029 - chr3R 30132941 intergenic Tpi - chr3R_13_30130001 chr3R_30130001 RAL-796 1660 chr3R 30184234 30184262 chr3R 30184347 30184376 12 113 1.5 1.5 1.5 4.8 142 chr3R 30184234 3` UTR CR44262 - chr3R 30184305 3` UTR CR44262 - chr3R 30184376 3` UTR CR44262 - chr3R_12_30180001 chr3R_30180001 RAL-796 1661 chr3R 30203634 30203645 chr3R 30203712 30203723 4 77 1.5 7.0 4.2 0.8 89 chr3R 30203634 intergenic not near genes chr3R 30203678 intergenic not near genes chr3R 30203723 intergenic not near genes chr3R_4_30200001 chr3R_30200001 RAL-796 1662 chr3R 30238769 30238797 chr3R 30239933 30239962 1360 6 1164 1.0 3.0 2.0 2.0 1193 chr3R 30238769 intergenic not near genes chr3R 30239366 intergenic not near genes chr3R 30239962 intergenic not near genes chr3R_6_30235001 chr3R_30235001 RAL-796 1663 chr3R 30252513 30252522 chr3R 30252680 30252688 4 167 15.5 19.5 17.5 0.2 175 chr3R 30252513 exon CG9682 + chr3R 30252600 exon CG9682 + chr3R 30252688 exon CG9682 + chr3R_4_30250001 chr3R_30250001 RAL-796 1664 chr3R 30260369 30260397 chr3R 30260445 30260473 7 76 3.5 5.0 4.2 1.3 104 chr3R 30260369 intergenic not near genes chr3R 30260421 intergenic not near genes chr3R 30260473 intergenic not near genes chr3R_7_30260001 chr3R_30260001 RAL-796 1665 chr3R 30262896 30262915 chr3R 30263001 30263020 12 104 6.0 2.0 4.0 2.4 124 chr3R 30262896 intergenic not near genes chr3R 30262958 intergenic not near genes chr3R 30263020 intergenic not near genes chr3R_12_30260001 chr3R_30260001 RAL-796 1666 chr3R 30268244 30268436 chr3R 30268323 30268516 12 79 4.0 3.5 3.8 2.5 272 chr3R 30268244 intergenic not near genes chr3R 30268380 intergenic not near genes chr3R 30268516 intergenic not near genes chr3R_12_30265001 chr3R_30265001 RAL-796 1667 chr3R 30288175 30288205 chr3R 30288423 30288453 5 248 0.5 3.5 2.0 1.7 278 chr3R 30288175 intron hdc + chr3R 30288314 intron hdc + chr3R 30288453 intron hdc + chr3R_5_30285001 chr3R_30285001 RAL-796 1668 chr3R 30375537 30375571 chr3R 30383162 30383196 412 8 7625 4.0 4.0 4.0 1.6 7659 chr3R 30375537 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383196 intergenic not near genes chr3R_8_30375001 chr3R_30375001 RAL-796 1669 chr3R 30387088 30387099 chr3R 30391371 30391382 6 4283 17.0 6.0 11.5 0.5 4294 chr3R 30387088 intron Fer1HCH - chr3R 30389235 exon Fer2LCH + chr3R 30391382 intergenic not near genes chr3R_6_30385001 chr3R_30385001 RAL-796 1670 chr3R 30387019 30387047 chr3R 30391314 30391340 9 4295 22.0 11.5 16.8 0.5 4321 chr3R 30387019 intron Fer1HCH - chr3R 30389180 intron Fer2LCH + chr3R 30391340 intergenic not near genes chr3R_9_30385001 chr3R_30385001 RAL-796 1671 chr3R 30396218 30396247 chr3R 30404484 30404513 roo 7 8266 2.5 1.5 2.0 2.3 8295 chr3R 30396218 intergenic not near genes chr3R 30400366 intergenic not near genes chr3R 30404513 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 RAL-796 1672 chr3R 30456397 30456424 chr3R 30456476 30456502 7 79 0.5 1.5 1.0 3.5 105 chr3R 30456397 intergenic CG2224 - chr3R 30456450 3` UTR CG2224 - chr3R 30456502 3` UTR CG2224 - chr3R_7_30455001 chr3R_30455001 RAL-796 1673 chr3R 30466701 30466726 chr3R 30466781 30466806 4 80 2.0 3.5 2.8 1.1 105 chr3R 30466701 intron PH4alphaEFB + chr3R 30466754 intron PH4alphaEFB + chr3R 30466806 intron PH4alphaEFB + chr3R_4_30465001 chr3R_30465001 RAL-796 1674 chr3R 30480473 30480513 chr3R 30482940 30482981 jockey 13 2464 3.0 3.5 3.2 3.1 2508 chr3R 30480473 intron PH4alphaEFB + chr3R 30481727 intron PH4alphaEFB + chr3R 30482981 intron PH4alphaEFB + chr3R_13_30480001 chr3R_30480001 RAL-796 1675 chr3R 30498405 30498433 chr3R 30498605 30498633 11 200 0.0 4.5 2.2 3.4 228 chr3R 30498405 intron PH4alphaNE1 - chr3R 30498519 intron PH4alphaNE1 - chr3R 30498633 intron PH4alphaNE1 - chr3R_11_30495001 chr3R_30495001 RAL-796 1676 chr3R 30549010 30549035 chr3R 30549102 30549127 11 92 2.5 3.5 3.0 2.8 117 chr3R 30549010 intron tmod + chr3R 30549068 intron tmod + chr3R 30549127 intron tmod + chr3R_11_30545001 chr3R_30545001 RAL-796 1677 chr3R 30618079 30618104 chr3R 30618164 30618189 9 85 1.5 3.0 2.2 2.8 110 chr3R 30618079 intergenic not near genes chr3R 30618134 intergenic CG44954 - chr3R 30618189 intergenic CG44954 - chr3R_9_30615001 chr3R_30615001 RAL-796 1678 chr3R 30679528 30679551 chr3R 30686997 30687020 blood 6 7469 1.0 7.0 4.0 1.2 7492 chr3R 30679528 intergenic not near genes chr3R 30683274 intergenic not near genes chr3R 30687020 intergenic not near genes chr3R_6_30680001 chr3R_30680001 RAL-796 1679 chr3R 30818810 30818838 chr3R 30820375 30820403 1360 11 1565 4.5 3.0 3.8 2.3 1593 chr3R 30818810 intron cindr + chr3R 30819606 intron cindr + chr3R 30820403 intron cindr + chr3R_11_30815001 chr3R_30815001 RAL-796 1680 chr3R 30850246 30850267 chr3R 30850338 30850359 8 92 3.5 5.0 4.2 1.5 113 chr3R 30850246 intergenic not near genes chr3R 30850302 intergenic not near genes chr3R 30850359 intergenic not near genes chr3R_8_30850001 chr3R_30850001 RAL-796 1681 chr3R 30888923 30888944 chr3R 30893450 30893471 8 4528 23.0 19.5 21.2 0.4 4548 chr3R 30888923 exon Sap-r - chr3R 30891197 intergenic not near genes chr3R 30893471 intergenic not near genes chr3R_8_30890001 chr3R_30890001 RAL-796 1682 chr3R 30900527 30900556 chr3R 30900601 30900636 9 79 2.0 3.5 2.8 2.4 109 chr3R 30900527 3` UTR Cyp4c3 + chr3R 30900582 3` UTR Cyp4c3 + chr3R 30900636 3` UTR Cyp4c3 + chr3R_9_30900001 chr3R_30900001 RAL-796 1683 chr3R 31042112 31042144 chr3R 31042199 31042230 6 87 2.5 4.5 3.5 1.3 118 chr3R 31042112 intron CanA1 + chr3R 31042171 intron CanA1 + chr3R 31042230 intron CanA1 + chr3R_6_31040001 chr3R_31040001 RAL-796 1684 chr3R 31062647 31062677 chr3R 31062728 31062732 11 78 2.5 0.5 1.5 4.4 85 chr3R 31062647 intergenic not near genes chr3R 31062690 intergenic not near genes chr3R 31062732 intergenic not near genes chr3R_11_31060001 chr3R_31060001 RAL-796 1685 chr3R 31105222 31105243 chr3R 31105475 31105499 13 254 5.0 3.0 4.0 2.6 277 chr3R 31105222 intergenic not near genes chr3R 31105360 intergenic not near genes chr3R 31105499 intergenic not near genes chr3R_13_31105001 chr3R_31105001 RAL-796 1686 chr3R 31135005 31135038 chr3R 31135139 31135172 10 134 3.0 3.0 3.0 2.5 167 chr3R 31135005 intron Gycbeta100B + chr3R 31135088 intron Gycbeta100B + chr3R 31135172 intron Gycbeta100B + chr3R_10_31135001 chr3R_31135001 RAL-796 1687 chr3R 31279376 31279396 chr3R 31285566 31285587 diver 4 6191 4.0 3.5 3.8 0.8 6211 chr3R 31279376 intergenic not near genes chr3R 31282482 intergenic not near genes chr3R 31285587 intergenic not near genes chr3R_4_31280001 chr3R_31280001 RAL-796 1688 chr3R 31300929 31300952 chr3R 31301019 31301033 4 87 1.5 3.0 2.2 1.2 104 chr3R 31300929 intergenic not near genes chr3R 31300981 intergenic not near genes chr3R 31301033 intergenic not near genes chr3R_4_31300001 chr3R_31300001 RAL-796 1689 chr3R 31413089 31413119 chr3R 31418289 31418315 copia 14 5198 3.0 0.0 1.5 5.6 5226 chr3R 31413089 intron Gprk2 + chr3R 31415702 intron Gprk2 + chr3R 31418315 intron Gprk2 + chr3R_14_31415001 chr3R_31415001 RAL-796 1690 chr3R 31426879 31426909 chr3R 31426971 31427001 10 92 5.0 4.0 4.5 1.8 122 chr3R 31426879 intron Gprk2 + chr3R 31426940 intron Gprk2 + chr3R 31427001 intron Gprk2 + chr3R_10_31425001 chr3R_31425001 RAL-796 1691 chr3R 31430726 31430740 chr3R 31430814 31430828 6 88 2.5 2.0 2.2 1.9 102 chr3R 31430726 intron Gprk2 + chr3R 31430777 intron Gprk2 + chr3R 31430828 intron Gprk2 + chr3R_6_31430001 chr3R_31430001 RAL-796 1692 chr3R 31435361 31435549 chr3R 31435513 31435810 10 173 3.5 2.5 3.0 2.5 449 chr3R 31435361 intron Gprk2 + chr3R 31435586 intron Gprk2 + chr3R 31435810 intron Gprk2 + chr3R_10_31435001 chr3R_31435001 RAL-796 1693 chr3R 31435556 31435582 chr3R 31435817 31435844 8 262 2.0 5.5 3.8 1.7 288 chr3R 31435556 intron Gprk2 + chr3R 31435700 intron Gprk2 + chr3R 31435844 intron Gprk2 + chr3R_8_31435001 chr3R_31435001 RAL-796 1694 chr3R 31512703 31512732 chr3R 31512808 31512836 8 105 5.0 3.5 4.2 1.5 133 chr3R 31512703 intergenic not near genes chr3R 31512770 intergenic not near genes chr3R 31512836 intergenic not near genes chr3R_8_31510001 chr3R_31510001 RAL-796 1695 chr3R 31691531 31691563 chr3R 31696297 31696329 Doc 17 4765 5.0 7.5 6.2 2.4 4798 chr3R 31691531 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696329 intergenic not near genes chr3R_17_31690001 chr3R_31690001 RAL-796 1696 chr3R 31831538 31831569 chr3R 31831616 31831627 12 77 2.5 5.5 4.0 2.4 89 chr3R 31831538 intron RhoGAP100F + chr3R 31831582 intron RhoGAP100F + chr3R 31831627 intron RhoGAP100F + chr3R_12_31830001 chr3R_31830001 RAL-796 1697 chr3R 31925693 31925724 chr3R 31925769 31925800 9 76 1.5 4.5 3.0 2.2 107 chr3R 31925693 intron heph - chr3R 31925746 intron heph - chr3R 31925800 intron heph - chr3R_9_31925001 chr3R_31925001 RAL-796 1698 chr3R 31997990 31998025 chr3R 32005460 32005485 blood 10 7469 3.5 4.5 4.0 2.0 7495 chr3R 31997990 intron heph - chr3R 32001738 intron heph - chr3R 32005485 intron heph - chr3R_10_32000001 chr3R_32000001 RAL-796 1699 chr3R 32034259 32034291 chr3R 32034342 32034374 9 83 3.5 1.5 2.5 2.6 115 chr3R 32034259 intergenic not near genes chr3R 32034316 intergenic not near genes chr3R 32034374 intergenic not near genes chr3R_9_32030001 chr3R_32030001 RAL-796 1700 chr4 61365 61391 chr4 61577 61603 5 212 1.5 2.0 1.8 1.8 238 chr4 61365 intron CR43957 + chr4 61484 intron CR43957 + chr4 61603 intron CR43957 + chr4_5_60001 chr4_60001 RAL-796 1701 chr4 76493 76516 chr4 81936 81959 I-element 9 5443 6.0 1.5 3.8 1.9 5466 chr4 76493 intron pan + chr4 79226 intron pan + chr4 81959 intron pan + chr4_9_75001 chr4_75001 RAL-796 1702 chr4 671603 671634 chr4 680186 680217 Tirant 13 8582 3.0 3.5 3.2 3.1 8614 chr4 671603 intron CG11360 + chr4 675910 intron CG11360 + chr4 680217 intron CG11360 + chr4_13_675001 chr4_675001 RAL-796 1703 chr4 1096316 1096332 chr4 1096494 1096510 7 177 4.0 0.5 2.2 2.2 194 chr4 1096316 intron sv + chr4 1096413 intron sv + chr4 1096510 intron sv + chr4_7_1095001 chr4_1095001 RAL-796 1704 chrX 295863 295878 chrX 303483 303498 412 6 7620 0.5 4.5 2.5 1.7 7635 chrX 295863 intron CG3777 + chrX 299680 intron CG3777 + chrX 303498 intron CG3777 + chrX_6_295001 chrX_295001 RAL-796 1705 chrX 318481 318499 chrX 323567 323585 flea 4 5086 3.0 3.0 3.0 1.0 5104 chrX 318481 intron,intron CG3777 +,CG32816 - chrX 321033 intron,intron CG3777 +,CG32816 - chrX 323585 intron,intron CG3777 +,CG32816 - chrX_4_320001 chrX_320001 RAL-796 1706 chrX 384203 384231 chrX 384731 384759 5 528 1.5 1.5 1.5 2.0 556 chrX 384203 intron CG32816 - chrX 384481 intron CG32816 - chrX 384759 intron CG32816 - chrX_5_380001 chrX_380001 RAL-796 1707 chrX 428416 428452 chrX 434601 434637 3S18 7 6185 3.0 1.0 2.0 2.3 6221 chrX 428416 intron CG32816 - chrX 431526 intron CG32816 - chrX 434637 intron CG32816 - chrX_7_430001 chrX_430001 RAL-796 1708 chrX 494602 494635 chrX 494693 494727 9 91 4.0 4.5 4.2 1.7 125 chrX 494602 intergenic CG17778 + chrX 494664 5` UTR CG17778 + chrX 494727 intron CG17778 + chrX_9_490001 chrX_490001 RAL-796 1709 chrX 551423 551454 chrX 558982 559014 412 8 7560 0.5 1.5 1.0 4.0 7591 chrX 551423 intron Appl + chrX 555218 intron Appl + chrX 559014 intron Appl + chrX_8_555001 chrX_555001 RAL-796 1710 chrX 618045 618061 chrX 618145 618161 5 99 4.0 5.5 4.8 0.9 116 chrX 618045 intron CG13366 - chrX 618103 intron CG13366 - chrX 618161 intron CG13366 - chrX_5_615001 chrX_615001 RAL-796 1711 chrX 667650 667684 chrX 667732 667768 13 83 1.5 2.0 1.8 4.6 118 chrX 667650 intergenic not near genes chrX 667709 intergenic not near genes chrX 667768 intergenic not near genes chrX_13_665001 chrX_665001 RAL-796 1712 chrX 680838 680869 chrX 680921 680952 8 82 1.5 3.0 2.2 2.5 114 chrX 680838 intergenic not near genes chrX 680895 intergenic not near genes chrX 680952 intergenic not near genes chrX_8_680001 chrX_680001 RAL-796 1713 chrX 706804 706829 chrX 707168 707193 5 364 0.0 3.0 1.5 2.0 389 chrX 706804 intron sdk + chrX 706998 intron sdk + chrX 707193 intron sdk + chrX_5_705001 chrX_705001 RAL-796 1714 chrX 778126 778158 chrX 778216 778248 10 90 4.5 1.0 2.8 2.6 122 chrX 778126 intron fz3 + chrX 778187 intron fz3 + chrX 778248 intron fz3 + chrX_10_775001 chrX_775001 RAL-796 1715 chrX 780593 780603 chrX 780669 780679 6 76 6.0 0.0 3.0 1.5 86 chrX 780593 intron fz3 + chrX 780636 intron fz3 + chrX 780679 intron fz3 + chrX_6_780001 chrX_780001 RAL-796 1716 chrX 806797 806808 chrX 806879 806904 4 92 5.5 1.0 3.2 1.0 107 chrX 806797 intron Sec22 + chrX 806850 intron Sec22 + chrX 806904 intron Sec22 + chrX_4_805001 chrX_805001 RAL-796 1717 chrX 827602 827621 chrX 835394 835413 roo 7 7792 5.0 0.5 2.8 1.8 7811 chrX 827602 intron CG43867 - chrX 831508 intron CG43867 - chrX 835413 intron CG43867 - chrX_7_830001 chrX_830001 RAL-796 1718 chrX 912770 912796 chrX 912914 912939 10 144 2.5 2.5 2.5 2.9 169 chrX 912770 intron CG43867 - chrX 912854 intron CG43867 - chrX 912939 intron CG43867 - chrX_10_910001 chrX_910001 RAL-796 1719 chrX 1127280 1127303 chrX 1127584 1127593 5 303 2.0 3.0 2.5 1.4 313 chrX 1127280 intron CG3655 - chrX 1127436 intron CG3655 - chrX 1127593 intron CG3655 - chrX_5_1125001 chrX_1125001 RAL-796 1720 chrX 1357778 1357806 chrX 1367948 1367976 Doc 8 10170 5.0 4.0 4.5 1.5 10198 chrX 1357778 intergenic png - chrX 1362877 intergenic not near genes chrX 1367976 intergenic not near genes chrX_8_1360001 chrX_1360001 RAL-796 1721 chrX 1424254 1424282 chrX 1424336 1424363 12 82 1.5 2.5 2.0 4.0 109 chrX 1424254 intron futsch + chrX 1424308 intron futsch + chrX 1424363 intron futsch + chrX_12_1420001 chrX_1420001 RAL-796 1722 chrX 1513830 1513844 chrX 1514152 1514158 7 320 6.5 3.0 4.8 1.2 328 chrX 1513830 intron inc + chrX 1513994 intron inc + chrX 1514158 intron inc + chrX_7_1510001 chrX_1510001 RAL-796 1723 chrX 1518046 1518072 chrX 1523448 1523474 jockey 9 5402 0.5 3.0 1.8 3.2 5428 chrX 1518046 intergenic inc + chrX 1520760 intergenic not near genes chrX 1523474 intergenic not near genes chrX_9_1520001 chrX_1520001 RAL-796 1724 chrX 1627975 1627998 chrX 1635443 1635466 gtwin 6 7468 3.5 3.0 3.2 1.4 7491 chrX 1627975 intron,intron Mur2B -,br + chrX 1631720 intron,intron Mur2B -,br + chrX 1635466 intron,intron Mur2B -,br + chrX_6_1630001 chrX_1630001 RAL-796 1725 chrX 1674858 1674866 chrX 1674933 1674942 4 76 7.5 0.0 3.8 0.8 84 chrX 1674858 3` UTR CG32809 - chrX 1674900 3` UTR CG32809 - chrX 1674942 3` UTR CG32809 - chrX_4_1670001 chrX_1670001 RAL-796 1726 chrX 1674872 1674880 chrX 1674932 1674934 4 64 5.5 0.0 2.8 1.1 62 chrX 1674872 3` UTR CG32809 - chrX 1674903 3` UTR CG32809 - chrX 1674934 3` UTR CG32809 - chrX_4_1670001 chrX_1670001 RAL-796 1727 chrX 1954891 1954916 chrX 1962831 1962837 Stalker2 6 7935 2.5 1.5 2.0 2.0 7946 chrX 1954891 intron Hr4 + chrX 1958864 intron Hr4 + chrX 1962837 intron Hr4 + chrX_6_1955001 chrX_1955001 RAL-796 1728 chrX 2069368 2069392 chrX 2069468 2069492 9 100 4.0 0.5 2.2 2.8 124 chrX 2069368 intron,exon CG4199 -,CG4194 + chrX 2069430 intron,3` UTR CG4199 -,CG4194 + chrX 2069492 intron,3` UTR CG4199 -,CG4194 + chrX_9_2065001 chrX_2065001 RAL-796 1729 chrX 2146652 2146685 chrX 2146744 2146778 4 93 3.0 4.5 3.8 0.8 126 chrX 2146652 intron Pgd + chrX 2146715 intron Pgd + chrX 2146778 intron Pgd + chrX_4_2145001 chrX_2145001 RAL-796 1730 chrX 2399837 2399866 chrX 2408188 2408216 roo 10 8349 2.0 0.0 1.0 5.0 8379 chrX 2399837 intergenic not near genes chrX 2404026 intergenic not near genes chrX 2408216 intergenic not near genes chrX_10_2400001 chrX_2400001 RAL-796 1731 chrX 2467402 2467431 chrX 2467487 2467515 17 85 2.5 2.5 2.5 4.9 113 chrX 2467402 intron boi - chrX 2467458 intron boi - chrX 2467515 intron boi - chrX_17_2465001 chrX_2465001 RAL-796 1732 chrX 2664392 2664416 chrX 2665538 2665562 1360 7 1146 1.0 1.5 1.2 3.2 1170 chrX 2664392 intron sgg + chrX 2664977 intron sgg + chrX 2665562 intron sgg + chrX_7_2660001 chrX_2660001 RAL-796 1733 chrX 2797725 2797753 chrX 2797857 2797885 10 132 2.0 2.0 2.0 3.3 160 chrX 2797725 intron kirre + chrX 2797805 intron kirre + chrX 2797885 intron kirre + chrX_10_2795001 chrX_2795001 RAL-796 1734 chrX 2844900 2844933 chrX 2852310 2852343 mdg1 8 7410 2.0 1.5 1.8 2.9 7443 chrX 2844900 intron kirre + chrX 2848622 intron kirre + chrX 2852343 intron kirre + chrX_8_2845001 chrX_2845001 RAL-796 1735 chrX 2888112 2888134 chrX 2888190 2888210 4 78 2.0 1.5 1.8 1.4 98 chrX 2888112 intron kirre + chrX 2888161 intron kirre + chrX 2888210 intron kirre + chrX_4_2885001 chrX_2885001 RAL-796 1736 chrX 2932237 2932242 chrX 2932313 2932324 4 79 0.0 0.5 0.2 3.3 87 chrX 2932237 intron,exon kirre +,CG32793 + chrX 2932280 intron,exon kirre +,CG32793 + chrX 2932324 intron,exon kirre +,CG32793 + chrX_4_2930001 chrX_2930001 RAL-796 1737 chrX 3038743 3038769 chrX 3038829 3038857 13 86 2.5 2.0 2.2 4.1 114 chrX 3038743 intron kirre + chrX 3038800 intron kirre + chrX 3038857 intron kirre + chrX_13_3035001 chrX_3035001 RAL-796 1738 chrX 3058027 3058042 chrX 3058268 3058283 pogo 4 241 4.0 1.0 2.5 1.1 256 chrX 3058027 intron kirre + chrX 3058155 intron kirre + chrX 3058283 intron kirre + chrX_4_3055001 chrX_3055001 RAL-796 1739 chrX 3083970 3083995 chrX 3084153 3084174 7 182 3.5 0.5 2.0 2.3 204 chrX 3083970 intron kirre + chrX 3084072 intron kirre + chrX 3084174 intron kirre + chrX_7_3080001 chrX_3080001 RAL-796 1740 chrX 3109448 3109475 chrX 3109525 3109552 10 77 1.0 3.0 2.0 3.3 104 chrX 3109448 intron kirre + chrX 3109500 intron kirre + chrX 3109552 intron kirre + chrX_10_3105001 chrX_3105001 RAL-796 1741 chrX 3322644 3322659 chrX 3322720 3322735 8 76 0.5 1.5 1.0 4.0 91 chrX 3322644 intron,intron dnc +,CR44886 - chrX 3322690 intron,intron dnc +,CR44886 - chrX 3322735 intron,intron dnc +,CR44886 - chrX_8_3320001 chrX_3320001 RAL-796 1742 chrX 3415015 3415030 chrX 3421200 3421215 3S18 6 6185 0.5 1.0 0.8 3.3 6200 chrX 3415015 intron,intron CR44999 +,CG12535 - chrX 3418115 intron,intron CR44999 +,CG12535 - chrX 3421215 intron,intron CR44999 +,CG12535 - chrX_6_3415001 chrX_3415001 RAL-796 1743 chrX 3493092 3493114 chrX 3502251 3502271 roo 7 9159 2.5 0.5 1.5 2.8 9179 chrX 3493092 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502271 intron,intron CR44999 +,Gas8 - chrX_7_3495001 chrX_3495001 RAL-796 1744 chrX 3513768 3513791 chrX 3513851 3513874 9 83 2.0 1.5 1.8 3.2 106 chrX 3513768 intron,intron CR44999 +,CG32791 - chrX 3513821 intron,intron CR44999 +,CG32791 - chrX 3513874 intron,intron CR44999 +,CG32791 - chrX_9_3510001 chrX_3510001 RAL-796 1745 chrX 3595024 3595049 chrX 3595102 3595123 6 75 1.0 2.5 1.8 2.1 99 chrX 3595024 intron AstA-R1 + chrX 3595074 intron AstA-R1 + chrX 3595123 intron AstA-R1 + chrX_6_3595001 chrX_3595001 RAL-796 1746 chrX 3597550 3597573 chrX 3619718 3619741 roo 9 22168 5.5 1.5 3.5 2.0 22191 chrX 3597550 intron AstA-R1 + chrX 3608646 intron AstA-R1 + chrX 3619741 intron AstA-R1 + chrX_9_3605001 chrX_3605001 RAL-796 1747 chrX 3863221 3863248 chrX 3863300 3863331 8 81 1.5 2.0 1.8 2.9 110 chrX 3863221 exon yin - chrX 3863276 exon yin - chrX 3863331 exon yin - chrX_8_3860001 chrX_3860001 RAL-796 1748 chrX 3866105 3866128 chrX 3866183 3866205 5 78 1.5 2.5 2.0 1.7 100 chrX 3866105 intron yin - chrX 3866155 intron yin - chrX 3866205 intron yin - chrX_5_3865001 chrX_3865001 RAL-796 1749 chrX 3950797 3950830 chrX 3950877 3950910 7 79 0.5 2.0 1.2 3.2 113 chrX 3950797 intron Vap-33A + chrX 3950854 intron Vap-33A + chrX 3950910 intron Vap-33A + chrX_7_3950001 chrX_3950001 RAL-796 1750 chrX 3986863 3986896 chrX 3994496 3994528 412 10 7633 1.5 1.0 1.2 4.5 7665 chrX 3986863 intergenic not near genes chrX 3990696 intergenic not near genes chrX 3994528 intergenic not near genes chrX_10_3990001 chrX_3990001 RAL-796 1751 chrX 4039077 4039084 chrX 4039156 4039163 4 79 6.0 5.5 5.8 0.6 86 chrX 4039077 intergenic not near genes chrX 4039120 intergenic not near genes chrX 4039163 intergenic not near genes chrX_4_4035001 chrX_4035001 RAL-796 1752 chrX 4157899 4157910 chrX 4164952 4164963 297 4 7053 2.5 3.0 2.8 1.1 7064 chrX 4157899 intron Fas2 - chrX 4161431 intron Fas2 - chrX 4164963 intron Fas2 - chrX_4_4160001 chrX_4160001 RAL-796 1753 chrX 4614021 4614040 chrX 4614133 4614159 10 118 2.5 6.0 4.2 1.9 138 chrX 4614021 intergenic not near genes chrX 4614090 intergenic not near genes chrX 4614159 intergenic not near genes chrX_10_4610001 chrX_4610001 RAL-796 1754 chrX 4638643 4638666 chrX 4638780 4638803 7 137 3.0 1.5 2.2 2.2 160 chrX 4638643 exon pon + chrX 4638723 3` UTR pon + chrX 4638803 3` UTR pon + chrX_7_4635001 chrX_4635001 RAL-796 1755 chrX 4700393 4700417 chrX 4700736 4700760 jockey 6 343 1.5 3.0 2.2 1.9 367 chrX 4700393 3` UTR ctp + chrX 4700576 3` UTR ctp + chrX 4700760 3` UTR ctp + chrX_6_4700001 chrX_4700001 RAL-796 1756 chrX 4723578 4723582 chrX 4723658 4723662 4 80 3.0 5.0 4.0 0.8 84 chrX 4723578 intron Proc-R + chrX 4723620 intron Proc-R + chrX 4723662 intron Proc-R + chrX_4_4720001 chrX_4720001 RAL-796 1757 chrX 4731822 4731851 chrX 4736915 4736921 jockey 4 5087 2.5 8.0 5.2 0.6 5099 chrX 4731822 intergenic not near genes chrX 4734372 intergenic not near genes chrX 4736921 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-796 1758 chrX 4763251 4763261 chrX 4763739 4763749 Stalker4 5 488 8.0 3.0 5.5 0.8 498 chrX 4763251 intergenic not near genes chrX 4763500 intergenic not near genes chrX 4763749 intergenic not near genes chrX_5_4760001 chrX_4760001 RAL-796 1759 chrX 4792383 4792402 chrX 4792816 4792832 jockey 4 432 2.0 3.0 2.5 1.1 449 chrX 4792383 intergenic not near genes chrX 4792608 intergenic not near genes chrX 4792832 intergenic not near genes chrX_4_4790001 chrX_4790001 RAL-796 1760 chrX 4827994 4827998 chrX 4835345 4835346 Stalker4 5 7358 2.0 4.0 3.0 1.2 7352 chrX 4827994 intergenic not near genes chrX 4831670 intergenic not near genes chrX 4835346 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-796 1761 chrX 4857298 4857315 chrX 4857374 4857391 5 76 0.0 2.0 1.0 2.5 93 chrX 4857298 intron CG42594 + chrX 4857344 intron CG42594 + chrX 4857391 intron CG42594 + chrX_5_4855001 chrX_4855001 RAL-796 1762 chrX 4864166 4864179 chrX 4864244 4864256 4 76 3.5 9.0 6.2 0.6 90 chrX 4864166 intron CG42594 + chrX 4864211 intron CG42594 + chrX 4864256 intron CG42594 + chrX_4_4860001 chrX_4860001 RAL-796 1763 chrX 4885773 4885805 chrX 4885865 4885898 9 92 1.0 2.0 1.5 3.6 125 chrX 4885773 intron CG42594 + chrX 4885836 intron CG42594 + chrX 4885898 intron CG42594 + chrX_9_4885001 chrX_4885001 RAL-796 1764 chrX 5002076 5002098 chrX 5002158 5002161 4 77 0.5 3.0 1.8 1.4 85 chrX 5002076 intron CR44833 - chrX 5002118 intron CR44833 - chrX 5002161 intron CR44833 - chrX_4_5000001 chrX_5000001 RAL-796 1765 chrX 5096284 5096305 chrX 5103846 5103870 springer 6 7563 2.5 2.5 2.5 1.7 7586 chrX 5096284 intron,intron CG15465 +,rg + chrX 5100077 intron,intron CG15465 +,rg + chrX 5103870 intron,intron CG15465 +,rg + chrX_6_5100001 chrX_5100001 RAL-796 1766 chrX 5338708 5338727 chrX 5339961 5339980 jockey 5 1253 2.0 1.0 1.5 2.0 1272 chrX 5338708 intergenic not near genes chrX 5339344 intergenic not near genes chrX 5339980 intergenic SK + chrX_5_5335001 chrX_5335001 RAL-796 1767 chrX 5471153 5471173 chrX 5471351 5471371 8 196 4.5 1.5 3.0 2.0 218 chrX 5471153 intron SPR + chrX 5471262 intron SPR + chrX 5471371 intron SPR + chrX_8_5470001 chrX_5470001 RAL-796 1768 chrX 5473596 5473609 chrX 5473670 5473681 6 75 1.5 2.5 2.0 2.0 85 chrX 5473596 intron SPR + chrX 5473638 intron SPR + chrX 5473681 intron SPR + chrX_6_5470001 chrX_5470001 RAL-796 1769 chrX 5524851 5524865 chrX 5528714 5528727 412 5 3863 1.5 0.5 1.0 2.5 3876 chrX 5524851 intergenic snoRNA:Psi28S-3342 - chrX 5526789 intergenic not near genes chrX 5528727 intergenic Vsx2 - chrX_5_5525001 chrX_5525001 RAL-796 1770 chrX 5848758 5848782 chrX 5848967 5848991 7 209 1.5 2.0 1.8 2.5 233 chrX 5848758 intergenic not near genes chrX 5848874 intergenic not near genes chrX 5848991 intergenic not near genes chrX_7_5845001 chrX_5845001 RAL-796 1771 chrX 5883818 5883839 chrX 5884059 5884080 pogo 12 241 1.5 5.5 3.5 2.7 262 chrX 5883818 intron CR45668 - chrX 5883949 intron CR45668 - chrX 5884080 intron CR45668 - chrX_12_5880001 chrX_5880001 RAL-796 1772 chrX 5884162 5884187 chrX 5884403 5884428 pogo 5 241 3.5 2.0 2.8 1.3 266 chrX 5884162 intron CR45668 - chrX 5884295 intron CR45668 - chrX 5884428 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-796 1773 chrX 5966803 5966832 chrX 5966885 5966914 12 80 2.5 2.5 2.5 3.4 111 chrX 5966803 intron Grip + chrX 5966858 intron Grip + chrX 5966914 intron Grip + chrX_12_5965001 chrX_5965001 RAL-796 1774 chrX 6118713 6118733 chrX 6118795 6118815 7 81 1.5 6.0 3.8 1.5 102 chrX 6118713 intron Ca-alpha1T - chrX 6118764 intron Ca-alpha1T - chrX 6118815 intron Ca-alpha1T - chrX_7_6115001 chrX_6115001 RAL-796 1775 chrX 6126975 6127000 chrX 6127305 6127331 8 331 4.0 1.5 2.8 2.1 356 chrX 6126975 intron Ca-alpha1T - chrX 6127153 intron Ca-alpha1T - chrX 6127331 intron Ca-alpha1T - chrX_8_6125001 chrX_6125001 RAL-796 1776 chrX 6219438 6219469 chrX 6219520 6219551 15 82 3.5 4.0 3.8 3.1 113 chrX 6219438 intergenic Btd - chrX 6219494 intergenic Btd -,Efr + chrX 6219551 intergenic Btd -,Efr + chrX_15_6215001 chrX_6215001 RAL-796 1777 chrX 6315437 6315470 chrX 6315586 6315619 12 149 1.5 4.0 2.8 3.2 182 chrX 6315437 intron CG15894 + chrX 6315528 intron CG15894 + chrX 6315619 intron CG15894 + chrX_12_6315001 chrX_6315001 RAL-796 1778 chrX 6335225 6335238 chrX 6337735 6337747 Tirant 4 2510 0.0 7.0 3.5 0.9 2522 chrX 6335225 intergenic not near genes chrX 6336486 intergenic not near genes chrX 6337747 intergenic CG3842 + chrX_4_6335001 chrX_6335001 RAL-796 1779 chrX 6392870 6392891 chrX 6397635 6397655 Doc 13 4764 1.0 2.5 1.8 4.6 4785 chrX 6392870 intergenic not near genes chrX 6395262 intergenic not near genes chrX 6397655 intergenic not near genes chrX_13_6395001 chrX_6395001 RAL-796 1780 chrX 6562831 6562835 chrX 6571313 6571316 Tirant 4 8482 4.0 5.5 4.8 0.7 8485 chrX 6562831 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571316 intron CG34417 + chrX_4_6565001 chrX_6565001 RAL-796 1781 chrX 6814301 6814302 chrX 6814376 6814380 4 77 1.5 1.5 1.5 1.6 79 chrX 6814301 intron iav + chrX 6814340 intron iav + chrX 6814380 intron iav + chrX_4_6810001 chrX_6810001 RAL-796 1782 chrX 6897589 6897704 chrX 6897655 6897814 6 96 0.5 0.5 0.5 4.0 225 chrX 6897589 intergenic not near genes chrX 6897702 intergenic not near genes chrX 6897814 intergenic not near genes chrX_6_6895001 chrX_6895001 RAL-796 1783 chrX 7023611 7023629 chrX 7031001 7031014 Tabor 5 7389 5.5 3.5 4.5 0.9 7403 chrX 7023611 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031014 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-796 1784 chrX 7120892 7120916 chrX 7120970 7120994 10 77 4.0 3.0 3.5 2.2 102 chrX 7120892 intergenic CR45532 - chrX 7120943 intergenic CR45532 - chrX 7120994 intergenic CR45532 - chrX_10_7120001 chrX_7120001 RAL-796 1785 chrX 7125243 7125272 chrX 7134402 7134429 roo 7 9159 2.5 3.0 2.8 1.8 9186 chrX 7125243 intergenic not near genes chrX 7129836 intergenic not near genes chrX 7134429 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-796 1786 chrX 7345202 7345215 chrX 7345294 7345307 5 92 1.0 1.0 1.0 2.5 105 chrX 7345202 intron,intron CR44357 -,CG1677 - chrX 7345254 intron,intron CR44357 -,CG1677 - chrX 7345307 intron,intron CR44357 -,CG1677 - chrX_5_7345001 chrX_7345001 RAL-796 1787 chrX 7702906 7702932 chrX 7703345 7703371 jockey 15 439 2.0 5.0 3.5 3.3 465 chrX 7702906 intron CHES-1-like - chrX 7703138 intron CHES-1-like - chrX 7703371 intron CHES-1-like - chrX_15_7700001 chrX_7700001 RAL-796 1788 chrX 7737159 7737174 chrX 7737241 7737256 5 82 2.0 1.5 1.8 1.8 97 chrX 7737159 5` UTR Tom40 + chrX 7737208 intron Tom40 + chrX 7737256 intron Tom40 + chrX_5_7735001 chrX_7735001 RAL-796 1789 chrX 7741548 7741572 chrX 7741631 7741643 8 83 4.0 3.5 3.8 1.7 95 chrX 7741548 intergenic not near genes chrX 7741596 intergenic not near genes chrX 7741643 intergenic not near genes chrX_8_7740001 chrX_7740001 RAL-796 1790 chrX 7930366 7930395 chrX 7930445 7930474 7 79 1.5 2.5 2.0 2.3 108 chrX 7930366 intron CG10777 - chrX 7930420 intron CG10777 - chrX 7930474 intron CG10777 - chrX_7_7930001 chrX_7930001 RAL-796 1791 chrX 7999459 7999469 chrX 7999538 7999547 4 79 4.0 3.0 3.5 0.9 88 chrX 7999459 exon Tbh + chrX 7999503 exon Tbh + chrX 7999547 exon Tbh + chrX_4_7995001 chrX_7995001 RAL-796 1792 chrX 8134857 8134889 chrX 8134945 8134977 8 88 1.5 0.0 0.8 4.4 120 chrX 8134857 intron,3` UTR cyr -,CG10958 + chrX 8134917 intron,3` UTR cyr -,CG10958 + chrX 8134977 intron cyr - chrX_8_8130001 chrX_8130001 RAL-796 1793 chrX 8536760 8536780 chrX 8536836 8536856 10 76 7.0 5.0 6.0 1.4 96 chrX 8536760 intron Nrg + chrX 8536808 intron Nrg + chrX 8536856 intron Nrg + chrX_10_8535001 chrX_8535001 RAL-796 1794 chrX 8605314 8605347 chrX 8605391 8605424 12 76 4.0 3.0 3.5 2.7 110 chrX 8605314 exon Caf1-180 - chrX 8605369 exon Caf1-180 - chrX 8605424 exon Caf1-180 - chrX_12_8605001 chrX_8605001 RAL-796 1795 chrX 8708693 8708711 chrX 8708876 8708894 6 183 13.5 4.5 9.0 0.6 201 chrX 8708693 intergenic not near genes chrX 8708794 intergenic not near genes chrX 8708894 intergenic not near genes chrX_6_8705001 chrX_8705001 RAL-796 1796 chrX 8922328 8922359 chrX 8922762 8922793 jockey 8 434 3.5 3.5 3.5 1.8 465 chrX 8922328 intron rdgA + chrX 8922560 intron rdgA + chrX 8922793 intron rdgA + chrX_8_8920001 chrX_8920001 RAL-796 1797 chrX 8948784 8948790 chrX 8956294 8956300 roo 4 7510 0.5 3.0 1.8 1.4 7516 chrX 8948784 intron rdgA + chrX 8952542 intron rdgA + chrX 8956300 intron rdgA + chrX_4_8950001 chrX_8950001 RAL-796 1798 chrX 9229910 9229932 chrX 9229990 9230012 5 80 2.5 1.5 2.0 1.7 102 chrX 9229910 intron CG12121 - chrX 9229961 intron CG12121 - chrX 9230012 intron CG12121 - chrX_5_9225001 chrX_9225001 RAL-796 1799 chrX 9337942 9337968 chrX 9338034 9338060 8 92 1.5 2.0 1.8 2.9 118 chrX 9337942 intron CG34449 - chrX 9338001 intron CG34449 - chrX 9338060 exon CG34449 - chrX_8_9335001 chrX_9335001 RAL-796 1800 chrX 9508143 9508165 chrX 9509660 9509683 jockey 4 1518 1.0 3.5 2.2 1.2 1540 chrX 9508143 intron CG32700 - chrX 9508913 intron CG32700 - chrX 9509683 intron CG32700 - chrX_4_9505001 chrX_9505001 RAL-796 1801 chrX 9575794 9575820 chrX 9576118 9576144 mdg3 10 322 2.0 7.0 4.5 1.8 350 chrX 9575794 intron,exon CG32699 -,CG42395 - chrX 9575969 intron,intron CG32699 -,CG42395 - chrX 9576144 intron,5` UTR CG32699 -,CG42395 - chrX_10_9575001 chrX_9575001 RAL-796 1802 chrX 9599176 9599194 chrX 9599254 9599272 9 77 6.5 2.5 4.5 1.6 96 chrX 9599176 intergenic not near genes chrX 9599224 intergenic not near genes chrX 9599272 intergenic not near genes chrX_9_9595001 chrX_9595001 RAL-796 1803 chrX 9873626 9873660 chrX 9873783 9873817 15 157 0.0 0.5 0.2 12.5 191 chrX 9873626 3` UTR CG32695 - chrX 9873722 intron CG32695 - chrX 9873817 exon CG32695 - chrX_15_9870001 chrX_9870001 RAL-796 1804 chrX 10027166 10027196 chrX 10027246 10027276 10 79 2.5 2.0 2.2 3.1 110 chrX 10027166 intron Cht6 + chrX 10027221 intron Cht6 + chrX 10027276 intron Cht6 + chrX_10_10025001 chrX_10025001 RAL-796 1805 chrX 10311757 10311765 chrX 10314723 10314739 4 2968 2.0 15.5 8.8 0.4 2982 chrX 10311757 intron alpha-Man-I - chrX 10313248 intron alpha-Man-I - chrX 10314739 intron alpha-Man-I - chrX_4_10310001 chrX_10310001 RAL-796 1806 chrX 10382661 10382689 chrX 10382743 10382771 8 82 0.5 1.0 0.8 4.4 110 chrX 10382661 exon CG17841 + chrX 10382716 3` UTR CG17841 + chrX 10382771 3` UTR CG17841 + chrX_8_10380001 chrX_10380001 RAL-796 1807 chrX 10440709 10440713 chrX 10440786 10440790 5 78 6.5 4.5 5.5 0.8 81 chrX 10440709 intron CG32683 - chrX 10440750 intron CG32683 - chrX 10440790 intron CG32683 - chrX_5_10440001 chrX_10440001 RAL-796 1808 chrX 10495563 10495572 chrX 10495640 10495649 7 77 2.5 1.0 1.8 2.5 86 chrX 10495563 intron spri - chrX 10495606 intron spri - chrX 10495649 intron spri - chrX_7_10495001 chrX_10495001 RAL-796 1809 chrX 10550853 10550889 chrX 10552320 10552356 hobo 8 1467 2.5 2.0 2.2 2.5 1503 chrX 10550853 intron spri - chrX 10551604 intron spri - chrX 10552356 intron spri - chrX_8_10550001 chrX_10550001 RAL-796 1810 chrX 10686049 10686084 chrX 10691186 10691221 roo 11 5137 2.5 2.5 2.5 3.1 5172 chrX 10686049 intron X11Lbeta + chrX 10688635 intron X11Lbeta + chrX 10691221 intron X11Lbeta + chrX_11_10685001 chrX_10685001 RAL-796 1811 chrX 10694154 10694166 chrX 10694233 10694245 4 79 4.5 3.5 4.0 0.8 91 chrX 10694154 intron X11Lbeta + chrX 10694200 intron X11Lbeta + chrX 10694245 intron X11Lbeta + chrX_4_10690001 chrX_10690001 RAL-796 1812 chrX 10772679 10772696 chrX 10772762 10772763 Tirant 7 81 2.5 2.0 2.2 2.2 84 chrX 10772679 intron CG15211 + chrX 10772721 intron CG15211 + chrX 10772763 intron CG15211 + chrX_7_10770001 chrX_10770001 RAL-796 1813 chrX 10803040 10803049 chrX 10803125 10803126 4 83 8.5 7.0 7.8 0.5 86 chrX 10803040 intron Imp - chrX 10803083 intron Imp - chrX 10803126 intron Imp - chrX_4_10800001 chrX_10800001 RAL-796 1814 chrX 11268588 11268595 chrX 11270056 11270088 hopper2 4 1486 3.5 6.0 4.8 0.7 1500 chrX 11268588 intron CG44422 - chrX 11269338 intron CG44422 - chrX 11270088 intron CG44422 - chrX_4_11265001 chrX_11265001 RAL-796 1815 chrX 11633415 11633444 chrX 11640469 11640498 297 12 7054 1.5 1.0 1.2 5.5 7083 chrX 11633415 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640498 intron Ptp10D + chrX_12_11635001 chrX_11635001 RAL-796 1816 chrX 11684874 11684899 chrX 11684997 11685025 8 125 4.0 1.5 2.8 2.1 151 chrX 11684874 intron bif + chrX 11684950 intron bif + chrX 11685025 intron bif + chrX_8_11680001 chrX_11680001 RAL-796 1817 chrX 11804675 11804690 chrX 11804779 11804794 4 104 1.0 0.5 0.8 2.2 119 chrX 11804675 intron Hsc70-3 - chrX 11804734 intron Hsc70-3 - chrX 11804794 intron Hsc70-3 - chrX_4_11800001 chrX_11800001 RAL-796 1818 chrX 12041194 12041208 chrX 12041623 12041644 6 435 1.5 3.0 2.2 1.9 450 chrX 12041194 intergenic not near genes chrX 12041419 intergenic not near genes chrX 12041644 intergenic not near genes chrX_6_12040001 chrX_12040001 RAL-796 1819 chrX 12277183 12277201 chrX 12277274 12277292 4 91 2.0 4.0 3.0 1.0 109 chrX 12277183 intron Ten-a + chrX 12277238 intron Ten-a + chrX 12277292 intron Ten-a + chrX_4_12275001 chrX_12275001 RAL-796 1820 chrX 12350773 12350789 chrX 12350854 12350870 6 81 5.5 0.0 2.8 1.6 97 chrX 12350773 intergenic not near genes chrX 12350822 intergenic not near genes chrX 12350870 intergenic not near genes chrX_6_12350001 chrX_12350001 RAL-796 1821 chrX 12356857 12356877 chrX 12356968 12356989 6 112 0.5 4.0 2.2 1.9 132 chrX 12356857 intergenic not near genes chrX 12356923 intergenic not near genes chrX 12356989 intergenic not near genes chrX_6_12355001 chrX_12355001 RAL-796 1822 chrX 12557153 12557161 chrX 12557229 12557237 4 76 5.5 5.0 5.2 0.6 84 chrX 12557153 intron CG43921 - chrX 12557195 intron CG43921 - chrX 12557237 intron CG43921 - chrX_4_12555001 chrX_12555001 RAL-796 1823 chrX 12670634 12670667 chrX 12670721 12670753 5 83 3.0 3.0 3.0 1.2 119 chrX 12670634 intron Tis11 + chrX 12670694 intron Tis11 + chrX 12670753 intron Tis11 + chrX_5_12670001 chrX_12670001 RAL-796 1824 chrX 12682588 12682606 chrX 12682678 12682698 6 92 2.0 0.0 1.0 3.0 110 chrX 12682588 intergenic Tis11 + chrX 12682643 intergenic Tis11 + chrX 12682698 intergenic Tis11 + chrX_6_12680001 chrX_12680001 RAL-796 1825 chrX 12785427 12785442 chrX 12785504 12785519 4 77 0.0 2.0 1.0 2.0 92 chrX 12785427 intergenic Pde9 -,CG32647 - chrX 12785473 intergenic Pde9 - chrX 12785519 intergenic Pde9 - chrX_4_12785001 chrX_12785001 RAL-796 1826 chrX 12994951 12994969 chrX 12995221 12995233 9 270 2.0 6.0 4.0 1.8 282 chrX 12994951 intron rad + chrX 12995092 intron rad + chrX 12995233 intron rad + chrX_9_12995001 chrX_12995001 RAL-796 1827 chrX 13061353 13061373 chrX 13061462 13061484 4 110 0.5 1.0 0.8 2.2 131 chrX 13061353 intron rad + chrX 13061418 intron rad + chrX 13061484 intron rad + chrX_4_13060001 chrX_13060001 RAL-796 1828 chrX 13106262 13106273 chrX 13106347 13106358 7 85 1.5 3.5 2.5 2.0 96 chrX 13106262 intron CG43313 - chrX 13106310 intron CG43313 - chrX 13106358 intron CG43313 - chrX_7_13105001 chrX_13105001 RAL-796 1829 chrX 13146598 13146629 chrX 13146686 13146717 6 88 1.0 1.5 1.2 2.7 119 chrX 13146598 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146717 intron CG32645 + chrX_6_13145001 chrX_13145001 RAL-796 1830 chrX 13172356 13172381 chrX 13172427 13172457 13 76 1.5 3.5 2.5 3.7 101 chrX 13172356 exon CG34411 - chrX 13172406 intron CG34411 - chrX 13172457 intron CG34411 - chrX_13_13170001 chrX_13170001 RAL-796 1831 chrX 13225991 13226016 chrX 13226116 13226140 8 125 1.5 2.5 2.0 2.7 149 chrX 13225991 intron mew - chrX 13226066 intron mew - chrX 13226140 intron mew - chrX_8_13225001 chrX_13225001 RAL-796 1832 chrX 13278158 13278182 chrX 13278241 13278265 4 83 0.5 0.0 0.2 3.3 107 chrX 13278158 intron HDAC4 - chrX 13278212 intron HDAC4 - chrX 13278265 intron HDAC4 - chrX_4_13275001 chrX_13275001 RAL-796 1833 chrX 13374836 13374868 chrX 13374916 13374948 6 80 2.5 1.5 2.0 2.0 112 chrX 13374836 intron CG1640 + chrX 13374892 intron CG1640 + chrX 13374948 intron CG1640 + chrX_6_13370001 chrX_13370001 RAL-796 1834 chrX 13390919 13390947 chrX 13391135 13391163 11 215 0.5 1.0 0.8 6.1 244 chrX 13390919 intergenic CR44620 - chrX 13391041 intergenic CR44620 - chrX 13391163 intergenic not near genes chrX_11_13390001 chrX_13390001 RAL-796 1835 chrX 13429461 13429466 chrX 13430610 13430615 jockey 5 1148 5.5 3.0 4.2 1.0 1154 chrX 13429461 intergenic not near genes chrX 13430038 intergenic not near genes chrX 13430615 intergenic not near genes chrX_5_13430001 chrX_13430001 RAL-796 1836 chrX 13429471 13429490 chrX 13430607 13430639 jockey 4 1146 3.5 3.0 3.2 1.0 1168 chrX 13429471 intergenic not near genes chrX 13430055 intergenic not near genes chrX 13430639 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-796 1837 chrX 13463656 13463671 chrX 13469233 13469248 mdg3 4 5577 1.0 0.0 0.5 2.7 5592 chrX 13463656 intron Neto + chrX 13466452 intron Neto + chrX 13469248 intron Neto + chrX_4_13465001 chrX_13465001 RAL-796 1838 chrX 13908798 13908809 chrX 13908875 13908880 4 76 3.5 7.5 5.5 0.6 82 chrX 13908798 intron mamo - chrX 13908839 intron mamo - chrX 13908880 intron mamo - chrX_4_13905001 chrX_13905001 RAL-796 1839 chrX 13934295 13934322 chrX 13934378 13934405 5 83 0.0 3.0 1.5 2.0 110 chrX 13934295 intron mamo - chrX 13934350 intron mamo - chrX 13934405 intron mamo - chrX_5_13930001 chrX_13930001 RAL-796 1840 chrX 13937982 13938005 chrX 13941253 13941276 I-element 4 3271 1.0 2.5 1.8 1.4 3294 chrX 13937982 intron mamo - chrX 13939629 intron mamo - chrX 13941276 intron mamo - chrX_4_13935001 chrX_13935001 RAL-796 1841 chrX 14105020 14105054 chrX 14114171 14114205 roo 11 9150 5.0 4.0 4.5 2.0 9185 chrX 14105020 intergenic not near genes chrX 14109612 intergenic not near genes chrX 14114205 5` UTR CR44657 + chrX_11_14105001 chrX_14105001 RAL-796 1842 chrX 14209472 14209489 chrX 14209563 14209580 4 91 3.5 3.0 3.2 1.0 108 chrX 14209472 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209526 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209580 intron,intron l(1)G0007 +,l(1)G0469 - chrX_4_14205001 chrX_14205001 RAL-796 1843 chrX 14246926 14246959 chrX 14247008 14247041 4 82 0.5 3.5 2.0 1.3 115 chrX 14246926 intergenic CG32599 + chrX 14246984 intergenic CG32599 + chrX 14247041 intergenic not near genes chrX_4_14245001 chrX_14245001 RAL-796 1844 chrX 14371808 14371837 chrX 14371888 14371917 7 79 1.5 2.0 1.8 2.5 109 chrX 14371808 intron dpr8 + chrX 14371862 intron dpr8 + chrX 14371917 intron dpr8 + chrX_7_14370001 chrX_14370001 RAL-796 1845 chrX 14589686 14589697 chrX 14589923 14589934 pogo 4 237 3.0 1.0 2.0 1.3 248 chrX 14589686 intron CG9413 - chrX 14589810 intron CG9413 - chrX 14589934 intron CG9413 - chrX_4_14585001 chrX_14585001 RAL-796 1846 chrX 14636460 14636484 chrX 14641901 14641925 I-element 5 5441 2.5 3.5 3.0 1.2 5465 chrX 14636460 intron NetA - chrX 14639192 intron NetA - chrX 14641925 intron NetA - chrX_5_14635001 chrX_14635001 RAL-796 1847 chrX 14713048 14713073 chrX 14713136 14713161 7 88 1.0 1.0 1.0 3.5 113 chrX 14713048 intron NetB - chrX 14713104 intron NetB - chrX 14713161 intron NetB - chrX_7_14710001 chrX_14710001 RAL-796 1848 chrX 14778032 14778061 chrX 14782829 14782858 Doc 4 4797 1.5 0.5 1.0 2.0 4826 chrX 14778032 intergenic CG5347 + chrX 14780445 intergenic not near genes chrX 14782858 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-796 1849 chrX 14818770 14818793 chrX 14823972 14823990 copia 7 5202 1.0 5.0 3.0 1.8 5220 chrX 14818770 intron rut - chrX 14821380 intron rut - chrX 14823990 intron rut - chrX_7_14820001 chrX_14820001 RAL-796 1850 chrX 14900864 14900874 chrX 14901056 14901063 6 191 2.5 2.5 2.5 1.7 199 chrX 14900864 intron Flo2 + chrX 14900964 intron Flo2 + chrX 14901063 intron Flo2 + chrX_6_14900001 chrX_14900001 RAL-796 1851 chrX 14968084 14968099 chrX 14968163 14968178 6 79 2.0 6.5 4.2 1.2 94 chrX 14968084 intron eag + chrX 14968131 intron eag + chrX 14968178 intron eag + chrX_6_14965001 chrX_14965001 RAL-796 1852 chrX 15122244 15122260 chrX 15122443 15122459 4 199 3.0 2.0 2.5 1.1 215 chrX 15122244 intergenic not near genes chrX 15122352 intergenic not near genes chrX 15122459 intergenic not near genes chrX_4_15120001 chrX_15120001 RAL-796 1853 chrX 15277644 15277669 chrX 15277729 15277754 7 85 2.0 3.5 2.8 1.8 110 chrX 15277644 intergenic not near genes chrX 15277699 intergenic not near genes chrX 15277754 intergenic not near genes chrX_7_15275001 chrX_15275001 RAL-796 1854 chrX 15413049 15413080 chrX 15417351 15417382 Juan 11 4301 4.5 2.0 3.2 2.6 4333 chrX 15413049 intron Cngl - chrX 15415216 intron Cngl - chrX 15417382 intron Cngl - chrX_11_15415001 chrX_15415001 RAL-796 1855 chrX 15421921 15421949 chrX 15423431 15423458 pogo 9 1511 1.0 0.5 0.8 5.0 1537 chrX 15421921 intron Cngl - chrX 15422690 intron Cngl - chrX 15423458 intron Cngl - chrX_9_15420001 chrX_15420001 RAL-796 1856 chrX 15435688 15435696 chrX 15436121 15436129 rover 6 433 4.0 3.5 3.8 1.2 441 chrX 15435688 intron Cngl - chrX 15435908 intron Cngl - chrX 15436129 intron Cngl - chrX_6_15435001 chrX_15435001 RAL-796 1857 chrX 15560954 15560972 chrX 15561051 15561069 6 96 0.5 3.0 1.8 2.1 115 chrX 15560954 intergenic not near genes chrX 15561012 intergenic not near genes chrX 15561069 intergenic not near genes chrX_6_15560001 chrX_15560001 RAL-796 1858 chrX 15589432 15589459 chrX 15589611 15589638 7 179 2.0 3.5 2.8 1.8 206 chrX 15589432 intron CG9220 - chrX 15589535 intron CG9220 - chrX 15589638 exon CG9220 - chrX_7_15585001 chrX_15585001 RAL-796 1859 chrX 15678038 15678068 chrX 15678113 15678145 6 76 1.5 4.0 2.8 1.6 107 chrX 15678038 intergenic CG12708 + chrX 15678092 intergenic CG12708 + chrX 15678145 intergenic CG12708 + chrX_6_15675001 chrX_15675001 RAL-796 1860 chrX 15681396 15681428 chrX 15681478 15681510 10 81 0.0 2.5 1.2 4.5 114 chrX 15681396 intergenic not near genes chrX 15681453 intergenic not near genes chrX 15681510 intergenic not near genes chrX_10_15680001 chrX_15680001 RAL-796 1861 chrX 15898449 15898461 chrX 15898603 15898615 4 154 1.0 2.5 1.8 1.4 166 chrX 15898449 intron shi + chrX 15898532 intron shi + chrX 15898615 intron shi + chrX_4_15895001 chrX_15895001 RAL-796 1862 chrX 16140133 16140170 chrX 16140216 16140253 8 80 2.0 2.0 2.0 2.7 120 chrX 16140133 intron disco-r - chrX 16140193 intron disco-r - chrX 16140253 intron disco-r - chrX_8_16140001 chrX_16140001 RAL-796 1863 chrX 16492647 16492674 chrX 16498224 16498251 mdg3 6 5577 5.5 4.5 5.0 1.0 5604 chrX 16492647 intron para - chrX 16495449 intron para - chrX 16498251 intron para - chrX_6_16495001 chrX_16495001 RAL-796 1864 chrX 16529430 16529438 chrX 16529541 16529549 4 111 0.0 2.0 1.0 2.0 119 chrX 16529430 intron para - chrX 16529490 intron para - chrX 16529549 intron para - chrX_4_16525001 chrX_16525001 RAL-796 1865 chrX 16689623 16689652 chrX 16689709 16689720 7 81 5.0 2.5 3.8 1.5 97 chrX 16689623 intron Sep4 - chrX 16689672 intron Sep4 - chrX 16689720 intron Sep4 - chrX_7_16685001 chrX_16685001 RAL-796 1866 chrX 16690458 16690477 chrX 16690534 16690556 5 77 1.0 1.5 1.2 2.3 98 chrX 16690458 intron Sep4 - chrX 16690507 intron Sep4 - chrX 16690556 intron Sep4 - chrX_5_16690001 chrX_16690001 RAL-796 1867 chrX 16785292 16785304 chrX 16785396 16785408 6 104 1.0 2.5 1.8 2.1 116 chrX 16785292 3` UTR CG9609 - chrX 16785350 3` UTR CG9609 - chrX 16785408 3` UTR CG9609 - chrX_6_16785001 chrX_16785001 RAL-796 1868 chrX 16833206 16833216 chrX 16833291 16833301 4 85 6.0 1.0 3.5 0.9 95 chrX 16833206 intron CG13004 - chrX 16833254 intron CG13004 - chrX 16833301 intron CG13004 - chrX_4_16830001 chrX_16830001 RAL-796 1869 chrX 17011734 17012000 chrX 17011881 17012083 8 99 1.5 3.5 2.5 2.3 349 chrX 17011734 intron CG45002 - chrX 17011908 intron CG45002 - chrX 17012083 intron CG45002 - chrX_8_17010001 chrX_17010001 RAL-796 1870 chrX 17088188 17088195 chrX 17088781 17088788 5 593 0.5 1.5 1.0 2.5 600 chrX 17088188 intergenic not near genes chrX 17088488 intergenic not near genes chrX 17088788 intergenic not near genes chrX_5_17085001 chrX_17085001 RAL-796 1871 chrX 17129873 17129898 chrX 17129954 17129978 11 79 1.5 2.5 2.0 3.7 105 chrX 17129873 intron CG5004 + chrX 17129926 intron CG5004 + chrX 17129978 intron CG5004 + chrX_11_17125001 chrX_17125001 RAL-796 1872 chrX 17234260 17234278 chrX 17234353 17234368 6 93 2.0 0.0 1.0 3.0 108 chrX 17234260 intron f + chrX 17234314 intron f + chrX 17234368 intron f + chrX_6_17230001 chrX_17230001 RAL-796 1873 chrX 17282878 17282910 chrX 17282955 17282983 12 77 2.5 0.0 1.2 5.5 105 chrX 17282878 intron CG5445 + chrX 17282930 5` UTR CG5445 + chrX 17282983 intron CG5445 + chrX_12_17280001 chrX_17280001 RAL-796 1874 chrX 17352591 17352620 chrX 17352694 17352723 13 103 0.0 5.5 2.8 3.4 132 chrX 17352591 intergenic not near genes chrX 17352657 intergenic not near genes chrX 17352723 intergenic not near genes chrX_13_17350001 chrX_17350001 RAL-796 1875 chrX 17502350 17502369 chrX 17502430 17502449 5 80 1.5 2.0 1.8 1.8 99 chrX 17502350 intron CG43658 - chrX 17502400 intron CG43658 - chrX 17502449 intron CG43658 - chrX_5_17500001 chrX_17500001 RAL-796 1876 chrX 17545003 17545030 chrX 17545085 17545112 9 82 3.5 3.0 3.2 2.1 109 chrX 17545003 intron CG43658 - chrX 17545058 intron CG43658 - chrX 17545112 intron CG43658 - chrX_9_17545001 chrX_17545001 RAL-796 1877 chrX 17911858 17911869 chrX 17911946 17911957 5 88 0.5 0.5 0.5 3.3 99 chrX 17911858 intron CG6847 + chrX 17911908 intron CG6847 + chrX 17911957 intron CG6847 + chrX_5_17910001 chrX_17910001 RAL-796 1878 chrX 18003453 18003482 chrX 18003535 18003564 5 82 0.0 0.0 0.0 5.0 111 chrX 18003453 intron Sh - chrX 18003508 intron Sh - chrX 18003564 intron Sh - chrX_5_18000001 chrX_18000001 RAL-796 1879 chrX 18042453 18042477 chrX 18042680 18042704 7 227 2.5 1.5 2.0 2.3 251 chrX 18042453 intron Sh - chrX 18042578 intron Sh - chrX 18042704 intron Sh - chrX_7_18040001 chrX_18040001 RAL-796 1880 chrX 18194064 18194104 chrX 18194599 18194639 BS 15 534 1.5 3.0 2.2 4.7 575 chrX 18194064 intron Frq2 + chrX 18194352 intron Frq2 + chrX 18194639 intron Frq2 + chrX_15_18190001 chrX_18190001 RAL-796 1881 chrX 18490044 18490051 chrX 18490198 18490206 4 154 4.0 1.5 2.8 1.1 162 chrX 18490044 intergenic CG15046 - chrX 18490125 intergenic not near genes chrX 18490206 intergenic not near genes chrX_4_18490001 chrX_18490001 RAL-796 1882 chrX 18558786 18558803 chrX 18558866 18558885 5 81 2.0 1.5 1.8 1.8 99 chrX 18558786 intron Bx + chrX 18558836 intron Bx + chrX 18558885 intron Bx + chrX_5_18555001 chrX_18555001 RAL-796 1883 chrX 18921929 18921956 chrX 18922009 18922036 11 80 3.0 0.0 1.5 4.4 107 chrX 18921929 intergenic not near genes chrX 18921982 intergenic not near genes chrX 18922036 intergenic not near genes chrX_11_18920001 chrX_18920001 RAL-796 1884 chrX 18947527 18947535 chrX 18947594 18947628 4 86 3.0 1.0 2.0 1.3 101 chrX 18947527 intron CG43759 + chrX 18947578 intron CG43759 + chrX 18947628 intron CG43759 + chrX_4_18945001 chrX_18945001 RAL-796 1885 chrX 19080329 19080355 chrX 19080435 19080461 10 106 1.5 2.0 1.8 3.6 132 chrX 19080329 intergenic not near genes chrX 19080395 intergenic not near genes chrX 19080461 intergenic not near genes chrX_10_19080001 chrX_19080001 RAL-796 1886 chrX 19084099 19084122 chrX 19084219 19084242 5 120 0.0 1.0 0.5 3.3 143 chrX 19084099 intergenic CR45503 + chrX 19084170 intergenic CR45503 + chrX 19084242 intergenic CR45503 + chrX_5_19080001 chrX_19080001 RAL-796 1887 chrX 19099659 19099682 chrX 19099742 19099765 12 83 2.5 1.5 2.0 4.0 106 chrX 19099659 intergenic not near genes chrX 19099712 intergenic not near genes chrX 19099765 intergenic not near genes chrX_12_19095001 chrX_19095001 RAL-796 1888 chrX 19124441 19124463 chrX 19124526 19124551 5 86 2.5 0.5 1.5 2.0 110 chrX 19124441 intergenic CG15882 - chrX 19124496 intergenic CG15882 - chrX 19124551 intergenic CG15882 -,tgy - chrX_5_19120001 chrX_19120001 RAL-796 1889 chrX 19125693 19125719 chrX 19125822 19125848 6 129 1.5 4.0 2.8 1.6 155 chrX 19125693 intron tgy - chrX 19125770 intron tgy - chrX 19125848 intron tgy - chrX_6_19125001 chrX_19125001 RAL-796 1890 chrX 13057298 13057300 chrX 19242812 19242814 9 6185514 3.5 0.0 1.8 3.2 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_9_16150001 chrX_16150001 RAL-796 1891 chrX 19244941 19244957 chrX 19245028 19245044 5 87 0.5 1.0 0.8 2.8 103 chrX 19244941 3` UTR CG7889 + chrX 19244992 3` UTR CG7889 + chrX 19245044 3` UTR CG7889 + chrX_5_19240001 chrX_19240001 RAL-796 1892 chrX 19356989 19357013 chrX 19358430 19358454 NOF 5 1441 3.0 1.0 2.0 1.7 1465 chrX 19356989 intron kek5 + chrX 19357722 intron kek5 + chrX 19358454 intron kek5 + chrX_5_19355001 chrX_19355001 RAL-796 1893 chrX 19472120 19472125 chrX 19472690 19472695 jockey 6 570 4.5 5.0 4.8 1.0 575 chrX 19472120 intergenic kek5 + chrX 19472408 intergenic kek5 + chrX 19472695 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-796 1894 chrX 19472126 19472159 chrX 19472689 19472701 jockey 17 562 2.5 5.0 3.8 3.5 575 chrX 19472126 intergenic kek5 + chrX 19472414 intergenic kek5 + chrX 19472701 intergenic not near genes chrX_17_19470001 chrX_19470001 RAL-796 1895 chrX 19500561 19500749 chrX 19500636 19500836 10 81 0.0 3.0 1.5 4.0 275 chrX 19500561 intron,intron CG14200 +,Pfrx + chrX 19500698 intron,intron CG14200 +,Pfrx + chrX 19500836 intron,intron CG14200 +,Pfrx + chrX_10_19500001 chrX_19500001 RAL-796 1896 chrX 19543108 19543132 chrX 19543195 19543218 5 87 0.0 4.5 2.2 1.6 110 chrX 19543108 intron CG32532 - chrX 19543163 intron CG32532 - chrX 19543218 intron CG32532 - chrX_5_19540001 chrX_19540001 RAL-796 1897 chrX 19710073 19710103 chrX 19711859 19711889 S-element 7 1784 0.0 3.0 1.5 2.8 1816 chrX 19710073 intron meso18E - chrX 19710981 intron meso18E - chrX 19711889 intron meso18E - chrX_7_19710001 chrX_19710001 RAL-796 1898 chrX 19756137 19756150 chrX 19756224 19756237 4 87 2.5 0.5 1.5 1.6 100 chrX 19756137 intron Pmp70 + chrX 19756187 intron Pmp70 + chrX 19756237 intron Pmp70 + chrX_4_19755001 chrX_19755001 RAL-796 1899 chrX 19838507 19838520 chrX 19838585 19838598 6 78 4.5 1.5 3.0 1.5 91 chrX 19838507 intron pico - chrX 19838552 intron pico - chrX 19838598 intron pico - chrX_6_19835001 chrX_19835001 RAL-796 1900 chrX 19881460 19881481 chrX 19881541 19881562 5 80 1.5 0.5 1.0 2.5 102 chrX 19881460 intron Hers + chrX 19881511 intron Hers + chrX 19881562 intron Hers + chrX_5_19880001 chrX_19880001 RAL-796 1901 chrX 19883782 19883796 chrX 19883866 19883881 8 85 1.0 3.5 2.2 2.5 99 chrX 19883782 intron Hers + chrX 19883832 intron Hers + chrX 19883881 intron Hers + chrX_8_19880001 chrX_19880001 RAL-796 1902 chrX 19981232 19981245 chrX 19981311 19981324 6 78 0.0 3.0 1.5 2.4 92 chrX 19981232 intergenic not near genes chrX 19981278 intergenic not near genes chrX 19981324 intergenic not near genes chrX_6_19980001 chrX_19980001 RAL-796 1903 chrX 19983866 19983898 chrX 19983946 19983973 4 79 0.5 0.0 0.2 3.3 107 chrX 19983866 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983973 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-796 1904 chrX 20041535 20041567 chrX 20041615 20041647 7 80 2.0 2.0 2.0 2.3 112 chrX 20041535 intron Dop2R - chrX 20041591 intron Dop2R - chrX 20041647 intron Dop2R - chrX_7_20040001 chrX_20040001 RAL-796 1905 chrX 20150383 20150393 chrX 20150471 20150482 5 89 0.5 1.0 0.8 2.8 99 chrX 20150383 intron CG9572 + chrX 20150432 intron CG9572 + chrX 20150482 intron CG9572 + chrX_5_20150001 chrX_20150001 RAL-796 1906 chrX 20312880 20312910 chrX 20312958 20312988 9 78 0.5 4.0 2.2 2.8 108 chrX 20312880 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20312988 intron CG1504 - chrX_9_20310001 chrX_20310001 RAL-796 1907 chrX 20369332 20369342 chrX 20369414 20369426 5 84 1.0 4.0 2.5 1.4 94 chrX 20369332 intergenic not near genes chrX 20369379 intergenic not near genes chrX 20369426 intergenic not near genes chrX_5_20365001 chrX_20365001 RAL-796 1908 chrX 20377325 20377347 chrX 20378792 20378814 hobo 9 1467 5.0 1.5 3.2 2.1 1489 chrX 20377325 intergenic not near genes chrX 20378070 intergenic not near genes chrX 20378814 intergenic not near genes chrX_9_20375001 chrX_20375001 RAL-796 1909 chrX 20443170 20443182 chrX 20443246 20443258 4 76 4.5 1.0 2.8 1.1 88 chrX 20443170 exon CG1695 + chrX 20443214 intron CG1695 + chrX 20443258 intron CG1695 + chrX_4_20440001 chrX_20440001 RAL-796 1910 chrX 20528600 20528628 chrX 20528948 20528976 6 348 1.5 3.0 2.2 1.9 376 chrX 20528600 intergenic not near genes chrX 20528788 intergenic not near genes chrX 20528976 intergenic not near genes chrX_6_20525001 chrX_20525001 RAL-796 1911 chrX 20575156 20575186 chrX 20575234 20575264 4 78 1.0 0.5 0.8 2.2 108 chrX 20575156 intergenic CG42580 + chrX 20575210 intergenic not near genes chrX 20575264 intergenic not near genes chrX_4_20575001 chrX_20575001 RAL-796 1912 chrX 20594302 20594326 chrX 20594388 20594412 5 86 1.5 1.5 1.5 2.0 110 chrX 20594302 intron RunxA - chrX 20594357 intron RunxA - chrX 20594412 intron RunxA - chrX_5_20590001 chrX_20590001 RAL-796 1913 chrX 20662317 20662331 chrX 20662400 20662414 6 83 4.5 0.0 2.2 1.9 97 chrX 20662317 intron CG1835 + chrX 20662366 intron CG1835 + chrX 20662414 intron CG1835 + chrX_6_20660001 chrX_20660001 RAL-796 1914 chrX 20710429 20710442 chrX 20710507 20710520 4 78 0.0 1.5 0.8 2.2 91 chrX 20710429 intergenic not near genes chrX 20710474 intergenic not near genes chrX 20710520 intergenic not near genes chrX_4_20710001 chrX_20710001 RAL-796 1915 chrX 20940719 20940756 chrX 20942188 20942225 hobo 10 1469 2.0 4.5 3.2 2.4 1506 chrX 20940719 intergenic not near genes chrX 20941472 intergenic not near genes chrX 20942225 intergenic not near genes chrX_10_20940001 chrX_20940001 RAL-796 1916 chrX 20981031 20981059 chrX 20981134 20981162 4 103 0.0 2.5 1.2 1.8 131 chrX 20981031 intergenic not near genes chrX 20981096 intergenic not near genes chrX 20981162 intergenic not near genes chrX_4_20980001 chrX_20980001 RAL-796 1917 chrX 21086132 21086164 chrX 21087161 21087193 jockey 7 1026 3.0 3.0 3.0 1.8 1061 chrX 21086132 intergenic not near genes chrX 21086662 intergenic not near genes chrX 21087193 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-796 1918 chrX 21088041 21088065 chrX 21088173 21088197 5 132 2.5 1.5 2.0 1.7 156 chrX 21088041 intergenic not near genes chrX 21088119 intergenic not near genes chrX 21088197 intergenic not near genes chrX_5_21085001 chrX_21085001 RAL-796 1919 chrX 21089153 21089181 chrX 21089247 21089275 5 94 0.5 2.5 1.5 2.0 122 chrX 21089153 intergenic not near genes chrX 21089214 intergenic not near genes chrX 21089275 intergenic not near genes chrX_5_21085001 chrX_21085001 RAL-796 1920 chrX 21264729 21264764 chrX 21264805 21264840 9 76 4.0 1.5 2.8 2.4 111 chrX 21264729 intron CG32521 - chrX 21264784 intron CG32521 - chrX 21264840 intron CG32521 - chrX_9_21260001 chrX_21260001 RAL-796 1921 chrX 21404259 21404286 chrX 21404376 21404403 7 115 3.0 2.5 2.8 1.8 144 chrX 21404259 intergenic not near genes chrX 21404331 intergenic not near genes chrX 21404403 intergenic not near genes chrX_7_21400001 chrX_21400001 RAL-796 1922 chrX 21408097 21408116 chrX 21408172 21408192 5 72 2.0 1.5 1.8 1.8 95 chrX 21408097 intergenic not near genes chrX 21408144 intergenic not near genes chrX 21408192 intergenic not near genes chrX_5_21405001 chrX_21405001 RAL-796 1923 chrX 21419703 21419737 chrX 21419792 21419824 9 88 1.5 3.0 2.2 2.8 121 chrX 21419703 intergenic not near genes chrX 21419764 intergenic not near genes chrX 21419824 intergenic not near genes chrX_9_21415001 chrX_21415001 RAL-796 1924 chrX 21605093 21605119 chrX 21605174 21605202 9 83 1.5 1.5 1.5 3.6 109 chrX 21605093 intron CG14476 - chrX 21605148 intron CG14476 - chrX 21605202 5` UTR CG14476 - chrX_9_21605001 chrX_21605001 RAL-796 1925 chrX 21668262 21668283 chrX 21668347 21668366 4 84 1.5 1.5 1.5 1.6 104 chrX 21668262 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668366 intergenic not near genes chrX_4_21665001 chrX_21665001 RAL-796 1926 chrX 22478882 22478895 chrX 22479015 22479028 6 133 0.0 2.5 1.2 2.7 146 chrX 22478882 intron CG12576 - chrX 22478955 intron CG12576 - chrX 22479028 intron CG12576 - chrX_6_22475001 chrX_22475001 RAL-796 1927 chrX 22522637 22522656 chrX 22525457 22525476 NOF 5 2820 4.0 1.0 2.5 1.4 2839 chrX 22522637 intron CG17600 + chrX 22524056 intron CG17600 + chrX 22525476 intron CG17600 + chrX_5_22520001 chrX_22520001 RAL-796 1928 chrX 22538991 22539176 chrX 22539170 22539365 5 185 0.5 0.5 0.5 3.3 374 chrX 22538991 intron,intron CG17600 +,CG17598 - chrX 22539178 intron,intron CG17600 +,CG17598 - chrX 22539365 intron,intron CG17600 +,CG17598 - chrX_5_22535001 chrX_22535001 RAL-796 1929 chrX 22564561 22564576 chrX 22575133 22575148 jockey 6 10572 9.0 6.0 7.5 0.7 10587 chrX 22564561 intergenic not near genes chrX 22569854 intergenic not near genes chrX 22575148 intergenic not near genes chrX_6_22565001 chrX_22565001 RAL-796 1930 chrX 22697500 22697523 chrX 22701797 22701820 Juan 7 4297 2.5 5.5 4.0 1.4 4320 chrX 22697500 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701820 intron CR44997 + chrX_7_22695001 chrX_22695001 RAL-796 1931 chrX 22763623 22763647 chrX 22763697 22763733 7 84 1.5 1.5 1.5 2.8 110 chrX 22763623 intron CR44997 + chrX 22763678 intron CR44997 + chrX 22763733 intron CR44997 + chrX_7_22760001 chrX_22760001 RAL-796 1932 chrX 22771505 22771532 chrX 22774796 22774823 297 6 3291 2.5 2.5 2.5 1.7 3318 chrX 22771505 intron CR44997 + chrX 22773164 intron CR44997 + chrX 22774823 intron CR44997 + chrX_6_22770001 chrX_22770001 RAL-796 1933 chrX 22867978 22868009 chrX 22868092 22868123 8 113 1.0 0.0 0.5 5.3 145 chrX 22867978 exon CG42346 + chrX 22868050 intron CG42346 + chrX 22868123 intron CG42346 + chrX_8_22865001 chrX_22865001 RAL-796 1934 chrX 22967403 22967514 chrX 23154554 23154691 diver 4 187164 3.5 7.0 5.2 0.6 187288 chrX 22967403 intergenic not near genes chrX 23061047 intergenic not near genes chrX 23154691 intergenic not near genes chrX_4_23060001 chrX_23060001 RAL-796 1935 chrX 22987105 22987134 chrX 22989764 22989793 Burdock 7 2659 0.5 1.0 0.8 3.9 2688 chrX 22987105 intron,intron stnA -,stnB - chrX 22988449 intron,intron stnA -,stnB - chrX 22989793 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RAL-796 1936 chrX 22996310 22996335 chrX 23003544 23003569 roo 6 7234 3.5 3.5 3.5 1.3 7259 chrX 22996310 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003569 intron,intron stnA -,stnB - chrX_6_22995001 chrX_22995001 RAL-796 1937 chrY 975793 975819 chrY 975873 975922 8 86 75.0 95.0 85.0 0.1 129 chrY 975793 intergenic not near genes chrY 975858 intergenic not near genes chrY 975922 intergenic not near genes chrY_8_975001 chrY_975001 RAL-796 1938 chrY 1419902 1419925 chrY 1420156 1420179 4 254 1.5 0.5 1.0 2.0 277 chrY 1419902 intergenic not near genes chrY 1420040 intergenic not near genes chrY 1420179 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-796