SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 225429 225502 jockey 4913 4986 20 73 '10-10 66.45 7.0 2.5 intron kis - chr2L_20_225001 chr2L_225001 0.50 RAL-774_125 2 chr2L 309515 309663 Burdock 6135 6369 18 148 '9-9 66.46 4.4 3.3 intron Plc21C + chr2L_18_305001 chr2L_305001 0.50 RAL-774_125 3 chr2L 625323 625388 412 7092 10 17 65 '8-9 67.83 4.8 2.9 exon lectin-21Ca + chr2L_17_625001 chr2L_625001 0.47 RAL-774_125 4 chr2L 769944 770100 roo 400 8675 20 156 '10-10 66.16 4.7 3.5 intergenic not near genes chr2L_20_765001 chr2L_765001 0.50 RAL-774_125 5 chr2L 917294 917462 Tabor 482 6849 30 168 '9-21 61.79 6.0 4.3 exon GluRIIC + chr2L_30_915001 chr2L_915001 0.30 RAL-774_125 6 chr2L 1320404 1320563 hobo 22 2938 15 159 '9-6 66.35 4.3 2.8 intergenic not near genes chr2L_15_1320001 chr2L_1320001 0.60 RAL-774_125 7 chr2L 1341449 1341655 pogo 164 2098 29 206 '18-11 66.23 4.9 4.9 exon CG33923 - chr2L_29_1340001 chr2L_1340001 0.62 RAL-774_125 8 chr2L 1457393 1457564 mdg3 5253 5496 18 171 '9-9 65.53 2.7 4.9 intergenic not near genes chr2L_18_1455001 chr2L_1455001 0.50 RAL-774_125 9 chr2L 1657264 1657418 P-element 4 2869 15 154 '10-5 50.26 5.8 2.2 intron chinmo + chr2L_15_1655001 chr2L_1655001 0.67 RAL-774_125 10 chr2L 1782699 1782851 roo 8685 407 21 152 '12-9 65.64 7.6 2.4 intergenic not near genes chr2L_21_1780001 chr2L_1780001 0.57 RAL-774_125 11 chr2L 2010248 2010401 Transpac 8 5219 37 153 '18-19 66.54 5.4 5.8 exon CG4238 + chr2L_37_2010001 chr2L_2010001 0.49 RAL-774_125 12 chr2L 2621588 2621631 BS 5082 5039 9 43 '7-2 61.17 1.9 3.1 intergenic not near genes chr2L_9_2620001 chr2L_2620001 0.78 RAL-774_125 13 chr2L 3008750 3008874 FB 20 4 15 124 '7-8 65.36 6.0 2.1 intron CG17265 + chr2L_15_3005001 chr2L_3005001 0.47 RAL-774_125 14 chr2L 3217087 3217252 Tabor 2 474 25 165 '19-6 64.72 5.7 3.7 intergenic not near genes chr2L_25_3215001 chr2L_3215001 0.76 RAL-774_125 15 chr2L 3688388 3688553 roo 8676 386 12 165 '6-6 54.56 1.5 4.8 intron CG34340 + chr2L_12_3685001 chr2L_3685001 0.50 RAL-774_125 16 chr2L 3947029 3947080 jockey 25 78 10 51 '4-6 66.17 8.8 1.0 intron fred - chr2L_10_3945001 chr2L_3945001 0.40 RAL-774_125 17 chr2L 4081602 4081751 flea 4775 244 4 149 '2-2 68.74 9.2 0.4 intron ed + chr2L_4_4080001 chr2L_4080001 0.50 RAL-774_125 18 chr2L 4121112 4121266 roo 394 8675 17 154 '9-8 65.95 7.5 2.0 exon Sr-CIII + chr2L_17_4120001 chr2L_4120001 0.53 RAL-774_125 19 chr2L 4181038 4181206 Transpac 2 5226 15 168 '5-10 67.65 5.6 2.3 intergenic not near genes chr2L_15_4180001 chr2L_4180001 0.33 RAL-774_125 20 chr2L 4232011 4232147 copia 221 4879 8 136 '3-5 64.19 4.2 1.5 intergenic not near genes chr2L_8_4230001 chr2L_4230001 0.38 RAL-774_125 21 chr2L 5724261 5724423 1360 3388 10 7 162 '5-2 66.67 0.9 3.7 intergenic sip1 +,CG11030 + chr2L_7_5720001 chr2L_5720001 0.71 RAL-774_125 22 chr2L 5806354 5806489 I-element 5330 12 17 135 '5-12 63.29 2.1 5.5 intron CG11034 + chr2L_17_5805001 chr2L_5805001 0.29 RAL-774_125 23 chr2L 6074016 6074082 jockey 4534 4595 8 66 '6-2 67.33 5.1 1.3 intergenic Kr-h2 +,CR43801 - chr2L_8_6070001 chr2L_6070001 0.75 RAL-774_125 24 chr2L 6245143 6245260 X-element 4692 11 18 117 '7-11 56.40 7.0 2.2 intergenic not near genes chr2L_18_6245001 chr2L_6245001 0.39 RAL-774_125 25 chr2L 6260264 6260421 roo 13 404 29 157 '15-14 66.74 5.8 4.3 intron Ddr + chr2L_29_6260001 chr2L_6260001 0.52 RAL-774_125 26 chr2L 6340399 6340558 Juan 4205 6 19 159 '8-11 64.75 5.8 2.8 intron Cpr + chr2L_19_6340001 chr2L_6340001 0.42 RAL-774_125 27 chr2L 6581626 6581794 Tirant 397 8114 21 168 '9-12 66.75 5.2 3.4 intron CG11319 - chr2L_21_6580001 chr2L_6580001 0.43 RAL-774_125 28 chr2L 7056245 7056386 P-element 2875 2885 11 141 '6-5 57.55 5.2 1.8 intergenic Mnn1 +,milt + chr2L_11_7055001 chr2L_7055001 0.55 RAL-774_125 29 chr2L 7102095 7102235 412 24 7534 25 140 '11-14 61.04 0.5 16.7 intron Pvf3 - chr2L_25_7100001 chr2L_7100001 0.44 RAL-774_125 30 chr2L 7270325 7270480 mdg3 5264 232 23 155 '15-8 64.89 5.6 3.5 intron Wnt4 - chr2L_23_7270001 chr2L_7270001 0.65 RAL-774_125 31 chr2L 8103943 8104093 copia 4883 239 16 150 '7-9 63.40 5.9 2.3 intron Bsg + chr2L_16_8100001 chr2L_8100001 0.44 RAL-774_125 32 chr2L 8331765 8331807 roo 361 404 6 42 '3-3 58.78 6.9 0.8 intron CG14275 + chr2L_6_8330001 chr2L_8330001 0.50 RAL-774_125 33 chr2L 8418244 8418403 Burdock 249 6139 22 159 '9-13 68.27 5.4 3.4 intron Akap200 + chr2L_22_8415001 chr2L_8415001 0.41 RAL-774_125 34 chr2L 8539263 8539376 Juan 4041 4167 8 113 '6-2 64.74 3.5 1.8 intron CG17834 + chr2L_8_8535001 chr2L_8535001 0.75 RAL-774_125 35 chr2L 8541402 8541540 diver 5896 6078 23 138 '14-9 63.06 3.7 4.9 3` UTR CG17834 + chr2L_23_8540001 chr2L_8540001 0.61 RAL-774_125 36 chr2L 8758911 8759069 roo 9063 8678 26 158 '13-13 64.17 4.8 4.5 intergenic not near genes chr2L_26_8755001 chr2L_8755001 0.50 RAL-774_125 37 chr2L 8959869 8960001 Ivk 5087 5342 13 132 '8-5 58.18 4.0 2.6 3` UTR CG9525 - chr2L_13_8955001 chr2L_8955001 0.62 RAL-774_125 38 chr2L 9065233 9065389 roo 9058 11 24 156 '13-11 66.74 6.8 3.1 intron CG31708 - chr2L_24_9065001 chr2L_9065001 0.54 RAL-774_125 39 chr2L 9148370 9148516 flea 4762 223 9 146 '8-1 63.98 7.7 1.0 intron CG32982 + chr2L_9_9145001 chr2L_9145001 0.89 RAL-774_125 40 chr2L 9204587 9204743 Transpac 5213 4929 16 156 '10-6 65.46 6.8 2.1 intron tai + chr2L_16_9200001 chr2L_9200001 0.62 RAL-774_125 41 chr2L 9596115 9596246 I-element 4 5324 19 131 '13-6 63.76 4.7 3.3 intergenic not near genes chr2L_19_9595001 chr2L_9595001 0.68 RAL-774_125 42 chr2L 9705096 9705251 roo 8675 404 31 155 '22-9 65.81 6.0 4.4 intron,intron pelo +,CG31710 - chr2L_31_9705001 chr2L_9705001 0.71 RAL-774_125 43 chr2L 9749650 9749822 mdg3 244 5253 26 172 '11-15 65.75 6.3 3.6 exon Cyp4e3 - chr2L_26_9745001 chr2L_9745001 0.42 RAL-774_125 44 chr2L 9850386 9850515 opus 158 7493 15 129 '1-14 64.26 4.6 2.7 intron nAChRalpha6 - chr2L_15_9850001 chr2L_9850001 0.07 RAL-774_125 45 chr2L 9879662 9879803 hopper 1408 23 10 141 '7-3 60.12 6.1 1.4 intron nAChRalpha6 - chr2L_10_9875001 chr2L_9875001 0.70 RAL-774_125 46 chr2L 10750036 10750177 412 485 27 23 141 '9-14 64.82 4.3 4.3 intron CG17124 - chr2L_23_10750001 chr2L_10750001 0.39 RAL-774_125 47 chr2L 11726108 11726261 jockey 4985 8 23 153 '13-10 68.04 4.7 4.0 intergenic not near genes chr2L_23_11725001 chr2L_11725001 0.57 RAL-774_125 48 chr2L 11973788 11973954 Burdock 6140 251 18 166 '12-6 68.75 6.0 2.6 intergenic not near genes chr2L_18_11970001 chr2L_11970001 0.67 RAL-774_125 49 chr2L 12143427 12143576 pogo 2076 2 18 149 '13-5 66.61 0.9 9.5 intron CG31760 + chr2L_18_12140001 chr2L_12140001 0.72 RAL-774_125 50 chr2L 12243792 12243953 mdg3 5488 5253 16 161 '12-4 62.41 4.5 2.9 intron aret + chr2L_16_12240001 chr2L_12240001 0.75 RAL-774_125 51 chr2L 12293219 12293378 roo 397 10 26 159 '14-12 65.98 8.8 2.7 intron aret + chr2L_26_12290001 chr2L_12290001 0.54 RAL-774_125 52 chr2L 12823136 12823186 Doc 144 93 7 50 '1-6 64.10 6.8 0.9 intergenic kek1 - chr2L_7_12820001 chr2L_12820001 0.14 RAL-774_125 53 chr2L 12957033 12957185 copia 4875 238 16 152 '10-6 65.85 2.7 4.3 intergenic not near genes chr2L_16_12955001 chr2L_12955001 0.62 RAL-774_125 54 chr2L 13000681 13000799 pogo 37 2074 5 118 '4-1 64.58 9.9 0.5 intergenic CG12404 -,Vha68-1 - chr2L_5_13000001 chr2L_13000001 0.80 RAL-774_125 55 chr2L 13138955 13139113 McClintock 15 6422 8 158 '5-3 66.84 3.3 1.9 intergenic not near genes chr2L_8_13135001 chr2L_13135001 0.62 RAL-774_125 56 chr2L 13147365 13147517 I-element 8 5348 15 152 '7-8 64.26 4.0 3.0 intergenic CR44199 + chr2L_15_13145001 chr2L_13145001 0.47 RAL-774_125 57 chr2L 13292912 13292978 X-element 4708 4642 11 66 '4-7 65.12 6.5 1.5 intron CG31729 + chr2L_11_13290001 chr2L_13290001 0.36 RAL-774_125 58 chr2L 13519198 13519356 297 6594 6964 13 158 '5-8 66.44 5.7 1.9 intron B4 - chr2L_13_13515001 chr2L_13515001 0.38 RAL-774_125 59 chr2L 13534796 13534940 flea 228 10 19 144 '8-11 67.76 5.2 3.1 intron B4 - chr2L_19_13530001 chr2L_13530001 0.42 RAL-774_125 60 chr2L 13675161 13675253 HMS-Beagle2 274 6933 8 92 '5-3 66.50 5.9 1.2 intergenic not near genes chr2L_8_13675001 chr2L_13675001 0.62 RAL-774_125 61 chr2L 13688376 13688536 412 6 7542 26 160 '10-16 65.69 7.2 3.2 intron CG31814 - chr2L_26_13685001 chr2L_13685001 0.38 RAL-774_125 62 chr2L 13747270 13747437 roo 400 8669 26 167 '12-14 68.50 6.3 3.6 intron,intron CR44846 +,TM9SF4 + chr2L_26_13745001 chr2L_13745001 0.46 RAL-774_125 63 chr2L 13846368 13846510 roo 8671 9046 25 142 '19-6 64.83 8.0 2.8 intron CenG1A + chr2L_25_13845001 chr2L_13845001 0.76 RAL-774_125 64 chr2L 13985976 13986094 I-element 8 5326 12 118 '7-5 62.89 4.3 2.3 exon rk - chr2L_12_13985001 chr2L_13985001 0.58 RAL-774_125 65 chr2L 14154240 14154399 hopper 1408 15 10 159 '4-6 67.39 6.9 1.3 intron CG17341 + chr2L_10_14150001 chr2L_14150001 0.40 RAL-774_125 66 chr2L 14197886 14198058 pogo 6 2095 16 172 '5-11 67.21 3.6 3.5 intron Dyrk2 - chr2L_16_14195001 chr2L_14195001 0.31 RAL-774_125 67 chr2L 14522381 14522446 flea 56 4757 4 65 '2-2 59.82 0.6 2.5 intergenic not near genes chr2L_4_14520001 chr2L_14520001 0.50 RAL-774_125 68 chr2L 14545571 14545744 roo 403 8666 32 173 '19-13 66.59 6.4 4.3 intergenic not near genes chr2L_32_14545001 chr2L_14545001 0.59 RAL-774_125 69 chr2L 14695612 14695748 copia 4883 225 11 136 '6-5 63.50 3.1 2.7 intergenic not near genes chr2L_11_14695001 chr2L_14695001 0.55 RAL-774_125 70 chr2L 14749981 14750111 Max-element 8260 8525 15 130 '7-8 57.67 6.4 2.0 intergenic not near genes chr2L_15_14745001 chr2L_14745001 0.47 RAL-774_125 71 chr2L 14816349 14816483 297 6967 29 19 134 '14-5 69.23 5.6 2.9 intergenic not near genes chr2L_19_14815001 chr2L_14815001 0.74 RAL-774_125 72 chr2L 14904255 14904392 297 6970 25 10 137 '7-3 66.45 2.2 3.1 intergenic not near genes chr2L_10_14900001 chr2L_14900001 0.70 RAL-774_125 73 chr2L 15019867 15019999 BS 5061 4801 25 132 '11-14 62.64 5.6 3.8 intron GABA-B-R1 + chr2L_25_15015001 chr2L_15015001 0.44 RAL-774_125 74 chr2L 15190034 15190196 flea 5002 4763 11 162 '4-7 70.26 5.5 1.7 intron CG4168 - chr2L_11_15190001 chr2L_15190001 0.36 RAL-774_125 75 chr2L 15336967 15337126 P-element 5 2879 16 159 '9-7 63.21 5.5 2.5 intergenic not near genes chr2L_16_15335001 chr2L_15335001 0.56 RAL-774_125 76 chr2L 15453518 15453564 G2 2836 2882 14 46 '6-8 63.31 0.0 14.0 intergenic not near genes chr2L_14_15450001 chr2L_15450001 0.43 RAL-774_125 77 chr2L 15778587 15778641 hobo 2916 47 7 54 '1-6 70.27 5.8 1.0 intergenic not near genes chr2L_7_15775001 chr2L_15775001 0.14 RAL-774_125 78 chr2L 15781239 15781383 roo 13 9054 30 144 '14-16 67.34 6.1 4.2 intergenic not near genes chr2L_30_15780001 chr2L_15780001 0.47 RAL-774_125 79 chr2L 15837404 15837467 412 5 7120 13 63 '6-7 60.90 5.5 2.0 intergenic not near genes chr2L_13_15835001 chr2L_15835001 0.46 RAL-774_125 80 chr2L 15996033 15996191 roo 400 4 15 158 '9-6 65.60 4.4 2.8 intergenic not near genes chr2L_15_15995001 chr2L_15995001 0.60 RAL-774_125 81 chr2L 16067019 16067194 HMS-Beagle2 310 6888 20 175 '7-13 68.67 5.2 3.2 intron beat-Ia + chr2L_20_16065001 chr2L_16065001 0.35 RAL-774_125 82 chr2L 16371809 16371883 jockey 4673 4735 12 74 '7-5 70.01 4.9 2.0 intergenic not near genes chr2L_12_16370001 chr2L_16370001 0.58 RAL-774_125 83 chr2L 16456623 16456730 hopper 66 6 17 107 '4-13 68.27 5.4 2.7 intergenic not near genes chr2L_17_16455001 chr2L_16455001 0.24 RAL-774_125 84 chr2L 16555667 16555726 Rt1b 460 499 7 59 '4-3 65.23 8.8 0.7 intron CG42389 + chr2L_7_16555001 chr2L_16555001 0.57 RAL-774_125 85 chr2L 16809634 16809834 copia 36 236 10 200 '6-4 65.71 0.0 10.0 intron,intron CG13280 -,CG13272 + chr2L_10_16805001 chr2L_16805001 0.60 RAL-774_125 86 chr2L 16942668 16942741 F-element 4285 4212 16 73 '8-8 65.24 3.6 3.5 intergenic not near genes chr2L_16_16940001 chr2L_16940001 0.50 RAL-774_125 87 chr2L 16968368 16968533 Stalker4 393 6963 11 165 '4-7 66.04 4.0 2.2 intergenic not near genes chr2L_11_16965001 chr2L_16965001 0.36 RAL-774_125 88 chr2L 16968404 16968511 Stalker 7206 6885 8 107 '5-3 59.01 4.8 1.4 intergenic not near genes chr2L_8_16965001 chr2L_16965001 0.62 RAL-774_125 89 chr2L 17116894 17117030 hobo 2929 20 12 136 '6-6 67.13 3.6 2.6 intergenic not near genes chr2L_12_17115001 chr2L_17115001 0.50 RAL-774_125 90 chr2L 17515868 17516044 297 388 6591 16 176 '9-7 63.64 3.6 3.5 intron Dhc36C + chr2L_16_17515001 chr2L_17515001 0.56 RAL-774_125 91 chr2L 17568843 17568978 mdg1 17 402 17 135 '1-16 64.96 4.0 3.4 intergenic not near genes chr2L_17_17565001 chr2L_17565001 0.06 RAL-774_125 92 chr2L 17574331 17574469 hopper 1400 19 6 138 '2-4 60.05 3.7 1.3 intergenic mir-287 + chr2L_6_17570001 chr2L_17570001 0.33 RAL-774_125 93 chr2L 17703990 17704131 412 4 7516 18 141 '7-11 65.94 4.0 3.6 intron CadN - chr2L_18_17700001 chr2L_17700001 0.39 RAL-774_125 94 chr2L 17811368 17811524 Transpac 4936 5220 18 156 '8-10 62.54 5.3 2.9 intron CadN2 - chr2L_18_17810001 chr2L_17810001 0.44 RAL-774_125 95 chr2L 17945976 17946025 jockey 4716 4674 11 49 '6-5 62.81 9.4 1.1 intergenic not near genes chr2L_11_17945001 chr2L_17945001 0.55 RAL-774_125 96 chr2L 18213114 18213249 hobo 23 2932 14 135 '9-5 64.61 4.1 2.7 intron CG42750 - chr2L_14_18210001 chr2L_18210001 0.64 RAL-774_125 97 chr2L 18670666 18670823 roo 9071 8681 27 157 '15-12 68.51 4.7 4.7 intron CG43338 - chr2L_27_18670001 chr2L_18670001 0.56 RAL-774_125 98 chr2L 18673991 18674157 roo 5 403 30 166 '15-15 69.09 7.7 3.4 exon Mst36Fb - chr2L_30_18670001 chr2L_18670001 0.50 RAL-774_125 99 chr2L 18845908 18845973 jockey 4768 4808 9 65 '6-3 64.50 7.7 1.0 5` UTR CG17321 + chr2L_9_18845001 chr2L_18845001 0.67 RAL-774_125 100 chr2L 18902642 18902929 jockey 6 76 7 287 '2-5 62.22 0.9 3.7 intergenic not near genes chr2L_7_18900001 chr2L_18900001 0.29 RAL-774_125 101 chr2L 19085161 19085315 invader4 317 19 18 154 '8-10 69.47 6.6 2.4 intron Lim3 - chr2L_18_19085001 chr2L_19085001 0.44 RAL-774_125 102 chr2L 19674421 19674531 pogo 11 2055 23 110 '17-6 68.25 3.9 4.7 intron Lar + chr2L_23_19670001 chr2L_19670001 0.74 RAL-774_125 103 chr2L 19678064 19678232 flea 5003 4758 11 168 '2-9 66.42 3.9 2.2 intron Lar + chr2L_11_19675001 chr2L_19675001 0.18 RAL-774_125 104 chr2L 19681371 19681502 hopper 8 39 15 131 '13-2 63.98 4.5 2.7 intron Lar + chr2L_15_19680001 chr2L_19680001 0.87 RAL-774_125 105 chr2L 19801712 19801878 roo 404 8663 25 166 '12-13 66.09 6.0 3.6 intron sick + chr2L_25_19800001 chr2L_19800001 0.48 RAL-774_125 106 chr2L 19834963 19835106 hobo 10 2925 19 143 '9-10 63.68 5.6 2.9 intron sick + chr2L_19_19830001 chr2L_19830001 0.47 RAL-774_125 107 chr2L 19989057 19989208 mdg3 230 5266 33 151 '12-21 65.84 7.2 4.0 intron CG43861 - chr2L_33_19985001 chr2L_19985001 0.36 RAL-774_125 108 chr2L 20169320 20169452 invader3 14 238 6 132 '5-1 61.10 0.0 6.0 intergenic not near genes chr2L_6_20165001 chr2L_20165001 0.83 RAL-774_125 109 chr2L 20530848 20530998 mdg1 7052 7448 16 150 '3-13 63.87 3.3 3.7 intergenic CG44270 + chr2L_16_20530001 chr2L_20530001 0.19 RAL-774_125 110 chr2L 20542370 20542539 mdg1 417 7046 20 169 '14-6 65.16 5.2 3.2 intergenic not near genes chr2L_20_20540001 chr2L_20540001 0.70 RAL-774_125 111 chr2L 20800148 20800283 Burdock 6362 13 25 135 '8-17 65.60 4.3 4.7 intron CG9328 + chr2L_25_20800001 chr2L_20800001 0.32 RAL-774_125 112 chr2L 20841950 20842008 G6 1954 2005 16 58 '6-10 63.46 9.9 1.5 intron CG31676 + chr2L_16_20840001 chr2L_20840001 0.38 RAL-774_125 113 chr2L 20941832 20941989 Max-element 8245 289 16 157 '7-9 61.64 4.6 2.9 intergenic not near genes chr2L_16_20940001 chr2L_20940001 0.44 RAL-774_125 114 chr2L 20942447 20942572 Tirant 352 8113 13 125 '5-8 68.16 3.5 2.9 intergenic not near genes chr2L_13_20940001 chr2L_20940001 0.38 RAL-774_125 115 chr2L 21403535 21403585 G5 4439 4394 15 50 '9-6 60.85 3.8 3.1 intergenic not near genes chr2L_15_21400001 chr2L_21400001 0.60 RAL-774_125 116 chr2L 21570235 21570282 Dm88 4431 4384 10 47 '6-4 66.15 4.3 1.9 intergenic not near genes chr2L_10_21570001 chr2L_21570001 0.60 RAL-774_125 117 chr2L 21795545 21795677 Burdock 40 250 19 132 '9-10 67.42 6.1 2.7 intergenic CG31612 - chr2L_19_21795001 chr2L_21795001 0.47 RAL-774_125 118 chr2L 21943283 21943332 roo 9006 9055 8 49 '5-3 63.29 10.1 0.7 intergenic not near genes chr2L_8_21940001 chr2L_21940001 0.62 RAL-774_125 119 chr2L 22059319 22059483 Tirant 16 395 5 164 '3-2 66.83 5.2 0.8 intergenic not near genes chr2L_5_22055001 chr2L_22055001 0.60 RAL-774_125 120 chr2L 22775552 22775613 pogo 2035 2 10 61 '4-6 68.26 4.5 1.8 intergenic not near genes chr2L_10_22775001 chr2L_22775001 0.40 RAL-774_125 121 chr2L 23295851 23295908 micropia 67 4966 8 57 '6-2 62.86 4.7 1.4 intergenic not near genes chr2L_8_23295001 chr2L_23295001 0.75 RAL-774_125 122 chr2R 329751 329811 X-element 4272 4310 9 60 '5-4 60.67 3.9 1.8 intergenic not near genes chr2R_9_325001 chr2R_325001 0.56 RAL-774_125 123 chr2R 640002 640156 flea 4773 244 5 154 '2-3 69.09 7.2 0.6 intron CG40378 + chr2R_5_640001 chr2R_640001 0.40 RAL-774_125 124 chr2R 982000 982155 gypsy 7433 6996 16 155 '5-11 63.78 4.2 3.1 intergenic not near genes chr2R_16_980001 chr2R_980001 0.31 RAL-774_125 125 chr2R 1105433 1105527 Stalker2 384 7307 9 94 '3-6 66.49 9.6 0.8 intron rl + chr2R_9_1105001 chr2R_1105001 0.33 RAL-774_125 126 chr2R 1592121 1592174 pogo 3 65 6 53 '4-2 72.93 7.9 0.7 intron CG17691 + chr2R_6_1590001 chr2R_1590001 0.67 RAL-774_125 127 chr2R 2050351 2050439 jockey 117 4983 11 88 '7-4 69.34 1.8 3.9 intron CG17684 - chr2R_11_2050001 chr2R_2050001 0.64 RAL-774_125 128 chr2R 2095391 2095545 Tabor 7316 18 9 154 '8-1 65.32 4.9 1.5 intron CG17684 - chr2R_9_2095001 chr2R_2095001 0.89 RAL-774_125 129 chr2R 3594455 3594561 copia 19 5069 8 106 '5-3 67.49 2.3 2.4 intergenic not near genes chr2R_8_3590001 chr2R_3590001 0.62 RAL-774_125 130 chr2R 4673537 4673585 Quasimodo 7354 7311 6 48 '3-3 64.03 6.7 0.8 3` UTR CG17883 + chr2R_6_4670001 chr2R_4670001 0.50 RAL-774_125 131 chr2R 4785202 4785338 Juan 4033 4188 9 136 '5-4 60.36 4.7 1.6 intergenic not near genes chr2R_9_4785001 chr2R_4785001 0.56 RAL-774_125 132 chr2R 5074796 5074867 Doc 487 454 7 71 '2-5 64.48 6.9 0.9 intergenic not near genes chr2R_7_5070001 chr2R_5070001 0.29 RAL-774_125 133 chr2R 5129915 5130009 1360 3321 3380 12 94 '8-4 70.22 6.6 1.6 intergenic not near genes chr2R_12_5125001 chr2R_5125001 0.67 RAL-774_125 134 chr2R 5179546 5179704 1360 3377 3380 29 158 '11-18 65.88 5.4 4.5 intron Nipped-A - chr2R_29_5175001 chr2R_5175001 0.38 RAL-774_125 135 chr2R 5931575 5931616 297 392 6932 7 41 '5-2 70.59 9.0 0.7 intergenic CG43366 + chr2R_7_5930001 chr2R_5930001 0.71 RAL-774_125 136 chr2R 6064306 6064475 mdg1 7041 7452 19 169 '6-13 66.95 5.5 2.9 intron CCHa2-R + chr2R_19_6060001 chr2R_6060001 0.32 RAL-774_125 137 chr2R 6172952 6173117 pogo 8 2090 27 165 '15-12 64.67 8.8 2.8 intergenic not near genes chr2R_27_6170001 chr2R_6170001 0.56 RAL-774_125 138 chr2R 6821805 6821948 Idefix 7363 8 12 143 '6-6 63.85 4.5 2.2 intron CR44442 - chr2R_12_6820001 chr2R_6820001 0.50 RAL-774_125 139 chr2R 6969122 6969286 FB 2 2 27 164 '18-9 65.20 5.6 4.1 intron,intron mim -,CheB42c - chr2R_27_6965001 chr2R_6965001 0.67 RAL-774_125 140 chr2R 7621305 7621468 mdg1 2 7443 13 163 '6-7 69.29 4.0 2.6 intergenic not near genes chr2R_13_7620001 chr2R_7620001 0.46 RAL-774_125 141 chr2R 7887269 7887313 hobo 63 25 5 44 '4-1 64.52 4.5 0.9 intergenic not near genes chr2R_5_7885001 chr2R_7885001 0.80 RAL-774_125 142 chr2R 8176959 8177124 mdg1 421 7052 19 165 '13-6 61.76 3.7 4.0 intron LRP1 + chr2R_19_8175001 chr2R_8175001 0.68 RAL-774_125 143 chr2R 8185497 8185651 FB 2 21 18 154 '14-4 68.08 4.5 3.3 intron LRP1 + chr2R_18_8185001 chr2R_8185001 0.78 RAL-774_125 144 chr2R 8207419 8207573 Transpac 5219 18 17 154 '11-6 63.45 6.1 2.4 intron LRP1 + chr2R_17_8205001 chr2R_8205001 0.65 RAL-774_125 145 chr2R 8500443 8500507 G6 1746 1799 16 64 '5-11 69.25 8.0 1.8 intron mtt - chr2R_16_8500001 chr2R_8500001 0.31 RAL-774_125 146 chr2R 8541963 8542111 hopper 1413 20 23 148 '16-7 65.08 7.5 2.7 intergenic not near genes chr2R_23_8540001 chr2R_8540001 0.70 RAL-774_125 147 chr2R 8757115 8757278 Transpac 299 9 19 163 '11-8 64.04 4.6 3.4 intron CG8740 + chr2R_19_8755001 chr2R_8755001 0.58 RAL-774_125 148 chr2R 9198672 9198840 1360 3380 2 16 168 '11-5 65.59 7.6 1.9 intron unpg + chr2R_16_9195001 chr2R_9195001 0.69 RAL-774_125 149 chr2R 9272842 9272994 FB 17 6 23 152 '5-18 69.12 5.6 3.5 intron Pkn - chr2R_23_9270001 chr2R_9270001 0.22 RAL-774_125 150 chr2R 9380839 9381002 3S18 5773 340 19 163 '8-11 66.11 5.9 2.8 intron CG13954 - chr2R_19_9380001 chr2R_9380001 0.42 RAL-774_125 151 chr2R 9409617 9409778 P-element 3 2883 20 161 '12-8 46.82 7.2 2.4 5` UTR wun - chr2R_20_9405001 chr2R_9405001 0.60 RAL-774_125 152 chr2R 9442912 9443057 412 7526 9 21 145 '12-9 63.86 6.8 2.7 intron ced-6 - chr2R_21_9440001 chr2R_9440001 0.57 RAL-774_125 153 chr2R 9870965 9871072 roo 402 48 19 107 '12-7 67.62 4.4 3.5 intron cbx - chr2R_19_9870001 chr2R_9870001 0.63 RAL-774_125 154 chr2R 10124466 10124642 Tirant 397 7 16 176 '7-9 68.00 4.5 2.9 5` UTR gem + chr2R_16_10120001 chr2R_10120001 0.44 RAL-774_125 155 chr2R 10754686 10754855 Max-element 8239 8528 31 169 '15-16 67.96 5.3 4.9 intron CG33144 - chr2R_31_10750001 chr2R_10750001 0.48 RAL-774_125 156 chr2R 10798414 10798560 pogo 4 2072 10 146 '7-3 66.29 4.0 2.0 5` UTR CG33144 - chr2R_10_10795001 chr2R_10795001 0.70 RAL-774_125 157 chr2R 10857748 10857874 jockey 4955 4670 17 126 '5-12 65.57 3.0 4.2 intron CG30015 - chr2R_17_10855001 chr2R_10855001 0.29 RAL-774_125 158 chr2R 10956184 10956338 Transpac 5227 2 19 154 '8-11 65.71 4.4 3.5 intergenic not near genes chr2R_19_10955001 chr2R_10955001 0.42 RAL-774_125 159 chr2R 10960937 10960980 Doc 74 31 9 43 '3-6 57.92 6.8 1.2 intergenic not near genes chr2R_9_10960001 chr2R_10960001 0.33 RAL-774_125 160 chr2R 11293571 11293724 roo 393 8676 21 153 '9-12 66.77 4.5 3.8 3` UTR CG30033 + chr2R_21_11290001 chr2R_11290001 0.43 RAL-774_125 161 chr2R 11659025 11659171 1360 17 3386 25 146 '18-7 63.42 7.7 2.9 intron Roc2 - chr2R_25_11655001 chr2R_11655001 0.72 RAL-774_125 162 chr2R 11682096 11682209 pogo 2090 52 17 113 '13-4 68.08 6.6 2.2 intron Buffy + chr2R_17_11680001 chr2R_11680001 0.76 RAL-774_125 163 chr2R 11706386 11706539 roo 401 15 29 153 '17-12 65.92 7.0 3.6 intergenic CR45377 - chr2R_29_11705001 chr2R_11705001 0.59 RAL-774_125 164 chr2R 11812684 11812833 opus 7026 7493 12 149 '5-7 69.54 4.5 2.2 3` UTR ths + chr2R_12_11810001 chr2R_11810001 0.42 RAL-774_125 165 chr2R 11951753 11951924 pogo 6 2099 20 171 '9-11 70.13 5.7 3.0 intron CG13188 + chr2R_20_11950001 chr2R_11950001 0.45 RAL-774_125 166 chr2R 12185279 12185457 accord 7381 1 36 178 '17-19 65.17 14.8 2.3 3` UTR,exon CG13175 +,CG33964 + chr2R_36_12185001 chr2R_12185001 0.47 RAL-774_125 167 chr2R 12253296 12253340 BS 4707 4659 8 44 '3-5 58.47 0.7 4.7 intergenic not near genes chr2R_8_12250001 chr2R_12250001 0.38 RAL-774_125 168 chr2R 13316074 13316251 hopper 1414 1412 29 177 '18-11 64.65 3.6 6.3 intergenic not near genes chr2R_29_13315001 chr2R_13315001 0.62 RAL-774_125 169 chr2R 13584853 13584965 hobo 2917 6 10 112 '3-7 63.23 6.1 1.4 intron,intron CG6191 -,CG45088 - chr2R_10_13580001 chr2R_13580001 0.30 RAL-774_125 170 chr2R 13699388 13699468 jockey 9 26 12 80 '6-6 73.17 7.3 1.4 intron fas + chr2R_12_13695001 chr2R_13695001 0.50 RAL-774_125 171 chr2R 13937821 13937892 F-element 13 83 9 71 '1-8 63.48 5.6 1.4 intron shot - chr2R_9_13935001 chr2R_13935001 0.11 RAL-774_125 172 chr2R 14344375 14344536 297 7 384 6 161 '1-5 67.64 6.2 0.8 intron Shroom + chr2R_6_14340001 chr2R_14340001 0.17 RAL-774_125 173 chr2R 14347266 14347375 roo 386 14 6 109 '3-3 62.14 8.3 0.6 intron Shroom + chr2R_6_14345001 chr2R_14345001 0.50 RAL-774_125 174 chr2R 14373002 14373113 Quasimodo 15 7317 9 111 '7-2 60.60 6.0 1.3 3` UTR,3` UTR Obp50b +,Obp50c + chr2R_9_14370001 chr2R_14370001 0.78 RAL-774_125 175 chr2R 14534098 14534267 copia 249 4871 19 169 '7-12 67.04 5.7 2.8 intron ttv + chr2R_19_14530001 chr2R_14530001 0.37 RAL-774_125 176 chr2R 14549972 14550137 copia 6 253 23 165 '12-11 68.39 5.2 3.7 intron ttv + chr2R_23_14545001 chr2R_14545001 0.52 RAL-774_125 177 chr2R 14660605 14660671 hobo 2925 2911 7 66 '2-5 65.38 9.6 0.7 intergenic not near genes chr2R_7_14660001 chr2R_14660001 0.29 RAL-774_125 178 chr2R 14661765 14661818 jockey 4770 4823 8 53 '5-3 60.71 9.9 0.7 intergenic not near genes chr2R_8_14660001 chr2R_14660001 0.62 RAL-774_125 179 chr2R 14706686 14706749 jockey 4677 4709 11 63 '6-5 68.10 9.9 1.0 intron mspo - chr2R_11_14705001 chr2R_14705001 0.55 RAL-774_125 180 chr2R 14883217 14883351 X-element 14 4687 15 134 '12-3 68.08 7.5 1.8 exon Cyp6a20 + chr2R_15_14880001 chr2R_14880001 0.80 RAL-774_125 181 chr2R 16552483 16552637 flea 249 4761 12 154 '4-8 68.10 4.7 2.1 5` UTR Syn2 + chr2R_12_16550001 chr2R_16550001 0.33 RAL-774_125 182 chr2R 16683257 16683362 mdg1 12 358 8 105 '6-2 68.61 1.6 3.1 intron CG30463 - chr2R_8_16680001 chr2R_16680001 0.75 RAL-774_125 183 chr2R 16892317 16892492 diver 5892 223 10 175 '4-6 62.59 4.0 2.0 intron CG8910 - chr2R_10_16890001 chr2R_16890001 0.40 RAL-774_125 184 chr2R 16921921 16922029 pogo 2092 67 10 108 '8-2 67.98 6.1 1.4 intergenic not near genes chr2R_10_16920001 chr2R_16920001 0.80 RAL-774_125 185 chr2R 17079567 17079738 pogo 6 2095 21 171 '6-15 66.79 5.4 3.3 intron CG30460 - chr2R_21_17075001 chr2R_17075001 0.29 RAL-774_125 186 chr2R 17268718 17268845 FB 10 22 19 127 '10-9 63.44 2.7 5.1 intron mbl + chr2R_19_17265001 chr2R_17265001 0.53 RAL-774_125 187 chr2R 17442220 17442338 Ivk 3 5337 14 118 '9-5 64.98 3.9 2.9 intron,exon EDTP -,CG18467 + chr2R_14_17440001 chr2R_17440001 0.64 RAL-774_125 188 chr2R 17447198 17447366 pogo 2093 3 14 168 '7-7 67.05 6.9 1.8 exon mthl4 - chr2R_14_17445001 chr2R_17445001 0.50 RAL-774_125 189 chr2R 17469227 17469389 pogo 9 2088 18 162 '12-6 64.60 3.1 4.4 intergenic Tes -,qkr54B + chr2R_18_17465001 chr2R_17465001 0.67 RAL-774_125 190 chr2R 17684886 17685015 Ivk 5354 16 16 129 '5-11 63.75 4.6 2.9 intron,exon HPS4 +,CG42561 + chr2R_16_17680001 chr2R_17680001 0.31 RAL-774_125 191 chr2R 17715484 17715538 roo 8714 331 4 54 '3-1 72.00 13.0 0.3 intron CG6424 - chr2R_4_17715001 chr2R_17715001 0.75 RAL-774_125 192 chr2R 17917191 17917321 hobo 2931 14 14 130 '5-9 64.48 4.4 2.6 intron Elk + chr2R_14_17915001 chr2R_17915001 0.36 RAL-774_125 193 chr2R 17962606 17962677 hobo 26 2924 9 71 '6-3 65.55 5.6 1.4 intergenic not near genes chr2R_9_17960001 chr2R_17960001 0.67 RAL-774_125 194 chr2R 18000097 18000263 412 495 15 24 166 '15-9 62.50 3.2 5.7 intron dpr13 - chr2R_24_18000001 chr2R_18000001 0.62 RAL-774_125 195 chr2R 18193295 18193459 pogo 2091 8 11 164 '3-8 69.44 3.1 2.7 intergenic CG33958 - chr2R_11_18190001 chr2R_18190001 0.27 RAL-774_125 196 chr2R 18244425 18244545 Tirant 8139 8475 16 120 '6-10 62.04 3.8 3.3 intergenic not near genes chr2R_16_18240001 chr2R_18240001 0.38 RAL-774_125 197 chr2R 18333027 18333205 FB 1 1 28 178 '11-17 68.12 2.7 7.6 intron sbb - chr2R_28_18330001 chr2R_18330001 0.39 RAL-774_125 198 chr2R 18343413 18343552 17.6 5 451 15 139 '13-2 66.42 4.2 2.9 intron sbb - chr2R_15_18340001 chr2R_18340001 0.87 RAL-774_125 199 chr2R 18513315 18513426 Juan 4184 3913 8 111 '3-5 66.20 5.0 1.3 intergenic not near genes chr2R_8_18510001 chr2R_18510001 0.38 RAL-774_125 200 chr2R 18528111 18528185 jockey 4724 4677 16 74 '9-7 65.14 4.6 2.9 intron CG10924 + chr2R_16_18525001 chr2R_18525001 0.56 RAL-774_125 201 chr2R 18528600 18528732 jockey 4956 4679 20 132 '9-11 63.76 5.3 3.2 intron CG10924 + chr2R_20_18525001 chr2R_18525001 0.45 RAL-774_125 202 chr2R 19146582 19146722 297 391 6590 23 140 '13-10 67.56 5.8 3.4 intron ena + chr2R_23_19145001 chr2R_19145001 0.57 RAL-774_125 203 chr2R 19569443 19569515 Doc 4692 4620 5 72 '3-2 67.52 6.6 0.7 intron sm - chr2R_5_19565001 chr2R_19565001 0.60 RAL-774_125 204 chr2R 19626767 19626826 jockey 72 15 14 59 '3-11 66.12 3.7 3.0 intron sm - chr2R_14_19625001 chr2R_19625001 0.21 RAL-774_125 205 chr2R 19652939 19653070 297 4 358 9 131 '4-5 65.90 4.4 1.7 3` UTR CR44212 - chr2R_9_19650001 chr2R_19650001 0.44 RAL-774_125 206 chr2R 19710790 19710946 copia 248 4876 16 156 '9-7 67.95 5.9 2.3 intergenic not near genes chr2R_16_19710001 chr2R_19710001 0.56 RAL-774_125 207 chr2R 19887730 19887891 roo 9047 8663 12 161 '8-4 64.03 2.4 3.5 intergenic not near genes chr2R_12_19885001 chr2R_19885001 0.67 RAL-774_125 208 chr2R 20339321 20339365 297 6970 6926 5 44 '1-4 67.16 8.6 0.5 intergenic not near genes chr2R_5_20335001 chr2R_20335001 0.20 RAL-774_125 209 chr2R 20382462 20382608 Bari1 1689 6 22 146 '10-12 65.13 5.9 3.2 intergenic not near genes chr2R_22_20380001 chr2R_20380001 0.45 RAL-774_125 210 chr2R 20422994 20423037 hobo 50 6 10 43 '6-4 64.65 11.7 0.8 intergenic not near genes chr2R_10_20420001 chr2R_20420001 0.60 RAL-774_125 211 chr2R 20536348 20536513 Tirant 8497 8117 26 165 '12-14 70.66 7.2 3.2 intergenic CG13423 + chr2R_26_20535001 chr2R_20535001 0.46 RAL-774_125 212 chr2R 20691400 20691575 blood 7013 374 20 175 '10-10 64.89 4.0 4.0 intergenic not near genes chr2R_20_20690001 chr2R_20690001 0.50 RAL-774_125 213 chr2R 20803881 20803941 I-element 5286 5346 7 60 '4-3 71.48 4.8 1.2 intergenic not near genes chr2R_7_20800001 chr2R_20800001 0.57 RAL-774_125 214 chr2R 20815658 20815763 hobo 2920 17 16 105 '4-12 62.82 2.7 4.3 intergenic not near genes chr2R_16_20815001 chr2R_20815001 0.25 RAL-774_125 215 chr2R 20947945 20948010 jockey 14 14 10 65 '6-4 65.88 6.0 1.4 intergenic not near genes chr2R_10_20945001 chr2R_20945001 0.60 RAL-774_125 216 chr2R 21439400 21439462 jockey 4907 4841 16 62 '9-7 64.58 5.9 2.3 intron Sdc - chr2R_16_21435001 chr2R_21435001 0.56 RAL-774_125 217 chr2R 21457356 21457489 roo 6 9041 20 133 '17-3 66.51 5.6 3.0 intron Sdc - chr2R_20_21455001 chr2R_21455001 0.85 RAL-774_125 218 chr2R 21475142 21475267 S-element 3 1666 18 125 '14-4 63.66 7.9 2.0 intron Sdc - chr2R_18_21475001 chr2R_21475001 0.78 RAL-774_125 219 chr2R 22451477 22451571 mdg1 346 7050 5 94 '2-3 73.52 3.0 1.2 intergenic not near genes chr2R_5_22450001 chr2R_22450001 0.40 RAL-774_125 220 chr2R 22757384 22757551 blood 7017 7381 26 167 '17-9 64.62 2.8 6.8 intron,intron CG42260 -,CR30267 + chr2R_26_22755001 chr2R_22755001 0.65 RAL-774_125 221 chr2R 22828796 22828973 HMS-Beagle 6812 246 5 177 '1-4 55.95 2.2 1.6 exon,3` UTR CG42284 +,CG30274 + chr2R_5_22825001 chr2R_22825001 0.20 RAL-774_125 222 chr2R 22899687 22899844 roo 404 15 20 157 '11-9 65.57 3.1 4.9 intron nahoda + chr2R_20_22895001 chr2R_22895001 0.55 RAL-774_125 223 chr2R 22909439 22909600 roo 5 400 30 161 '11-19 65.34 5.2 4.8 intron nahoda + chr2R_30_22905001 chr2R_22905001 0.37 RAL-774_125 224 chr2R 23441328 23441495 pogo 2088 3 18 167 '12-6 63.92 4.6 3.2 intergenic Or59a - chr2R_18_23440001 chr2R_23440001 0.67 RAL-774_125 225 chr2R 23514052 23514126 Stalker2 71 7609 6 74 '1-5 56.98 3.6 1.3 intergenic not near genes chr2R_6_23510001 chr2R_23510001 0.17 RAL-774_125 226 chr2R 23663471 23663639 P-element 2883 2882 31 168 '14-17 45.53 6.8 4.0 intron Pde8 + chr2R_31_23660001 chr2R_23660001 0.45 RAL-774_125 227 chr2R 25004011 25004182 pogo 6 2094 10 171 '5-5 65.72 5.4 1.6 intron zip - chr2R_10_25000001 chr2R_25000001 0.50 RAL-774_125 228 chr2R 25203726 25203787 1360 3377 3316 13 61 '6-7 63.20 3.9 2.7 intron CG9380 - chr2R_13_25200001 chr2R_25200001 0.46 RAL-774_125 229 chr3L 505692 505760 jockey 4767 4835 9 68 '1-8 70.67 4.7 1.6 intron klar - chr3L_9_505001 chr3L_505001 0.11 RAL-774_125 230 chr3L 1058974 1059070 roo 351 25 8 96 '4-4 71.50 4.0 1.6 intron bab1 - chr3L_8_1055001 chr3L_1055001 0.50 RAL-774_125 231 chr3L 1082090 1082248 roo 405 7 15 158 '10-5 70.65 5.1 2.5 intron bab1 - chr3L_15_1080001 chr3L_1080001 0.67 RAL-774_125 232 chr3L 1490259 1490316 1360 3096 3150 8 57 '2-6 62.45 8.1 0.9 intergenic not near genes chr3L_8_1490001 chr3L_1490001 0.25 RAL-774_125 233 chr3L 1895606 1895750 roo 9 402 17 144 '6-11 65.07 6.1 2.4 intron CG1887 - chr3L_17_1895001 chr3L_1895001 0.35 RAL-774_125 234 chr3L 2386499 2386651 roo 401 20 20 152 '11-9 65.74 3.9 4.1 intergenic not near genes chr3L_20_2385001 chr3L_2385001 0.55 RAL-774_125 235 chr3L 2608890 2608949 hopper 7 1349 8 59 '3-5 68.27 7.0 1.0 intron Pxn - chr3L_8_2605001 chr3L_2605001 0.38 RAL-774_125 236 chr3L 2680037 2680185 hobo 3 2917 15 148 '10-5 57.96 3.5 3.3 intron Fife - chr3L_15_2680001 chr3L_2680001 0.67 RAL-774_125 237 chr3L 2795327 2795495 hobo 1 2930 24 168 '16-8 64.83 5.4 3.8 intron CG43444 - chr3L_24_2795001 chr3L_2795001 0.67 RAL-774_125 238 chr3L 3179798 3179967 Tirant 8501 8116 23 169 '15-8 67.41 4.6 4.1 intron Girdin + chr3L_23_3175001 chr3L_3175001 0.65 RAL-774_125 239 chr3L 3397283 3397391 1360 33 3383 8 108 '3-5 73.19 4.8 1.4 intergenic not near genes chr3L_8_3395001 chr3L_3395001 0.38 RAL-774_125 240 chr3L 3766367 3766521 roo 9052 7 20 154 '4-16 66.26 6.2 2.8 intron CG32264 - chr3L_20_3765001 chr3L_3765001 0.20 RAL-774_125 241 chr3L 3916138 3916288 roo 8670 9055 28 150 '18-10 66.04 6.9 3.5 intron Eip63F-1 - chr3L_28_3915001 chr3L_3915001 0.64 RAL-774_125 242 chr3L 3921209 3921346 roo 29 394 17 137 '5-12 65.11 1.4 7.1 intron Eip63F-1 - chr3L_17_3920001 chr3L_3920001 0.29 RAL-774_125 243 chr3L 4062068 4062205 hobo 2932 3 7 137 '1-6 67.81 3.1 1.7 intergenic CG18869 +,dib + chr3L_7_4060001 chr3L_4060001 0.14 RAL-774_125 244 chr3L 4187213 4187342 hobo 19 2921 21 129 '10-11 63.30 3.6 4.6 intron,intron CG18675 +,Teh2 - chr3L_21_4185001 chr3L_4185001 0.48 RAL-774_125 245 chr3L 4411845 4412009 roo 403 11 21 164 '8-13 64.85 5.3 3.3 intron DOR + chr3L_21_4410001 chr3L_4410001 0.38 RAL-774_125 246 chr3L 4797352 4797481 hobo 13 2708 11 129 '8-3 67.53 4.8 1.9 intergenic not near genes chr3L_11_4795001 chr3L_4795001 0.73 RAL-774_125 247 chr3L 4846484 4846607 Juan 17 4186 18 123 '12-6 62.73 2.7 4.9 intergenic not near genes chr3L_18_4845001 chr3L_4845001 0.67 RAL-774_125 248 chr3L 5140243 5140400 Tirant 8504 9 18 157 '11-7 65.61 4.2 3.5 exon CHMP2B + chr3L_18_5140001 chr3L_5140001 0.61 RAL-774_125 249 chr3L 5438698 5438869 hopper 6 1413 15 171 '10-5 70.78 5.0 2.5 intron CG34391 + chr3L_15_5435001 chr3L_5435001 0.67 RAL-774_125 250 chr3L 5870403 5870571 blood 374 9 17 168 '14-3 69.33 6.4 2.3 intergenic not near genes chr3L_17_5870001 chr3L_5870001 0.82 RAL-774_125 251 chr3L 5884116 5884248 roo 9031 8672 9 132 '3-6 63.11 6.6 1.2 intergenic CG13287 + chr3L_9_5880001 chr3L_5880001 0.33 RAL-774_125 252 chr3L 6683748 6683916 hobo 4 2931 19 168 '11-8 64.95 4.8 3.3 intergenic not near genes chr3L_19_6680001 chr3L_6680001 0.58 RAL-774_125 253 chr3L 7177782 7177922 roo 19 396 13 140 '4-9 64.08 5.7 1.9 intron Dscam2 - chr3L_13_7175001 chr3L_7175001 0.31 RAL-774_125 254 chr3L 7562036 7562187 FB 5 1 20 151 '11-9 65.14 6.0 2.9 intergenic not near genes chr3L_20_7560001 chr3L_7560001 0.55 RAL-774_125 255 chr3L 7993113 7993223 FB 31 8 5 110 '2-3 67.23 7.1 0.6 intron nmo + chr3L_5_7990001 chr3L_7990001 0.40 RAL-774_125 256 chr3L 8007030 8007189 412 7533 9 23 159 '10-13 66.47 1.8 8.2 intron nmo + chr3L_23_8005001 chr3L_8005001 0.43 RAL-774_125 257 chr3L 8249043 8249107 jockey 4677 4741 10 64 '6-4 65.61 6.9 1.3 intron Dscam4 + chr3L_10_8245001 chr3L_8245001 0.60 RAL-774_125 258 chr3L 8392556 8392701 flea 4989 11 11 145 '4-7 68.88 3.4 2.5 intergenic Jon66Ci +,Jon66Cii - chr3L_11_8390001 chr3L_8390001 0.36 RAL-774_125 259 chr3L 8395187 8395282 pogo 2 2035 10 95 '8-2 67.99 4.4 1.9 intergenic not near genes chr3L_10_8395001 chr3L_8395001 0.80 RAL-774_125 260 chr3L 8696407 8696538 opus 7479 7143 11 131 '3-8 64.27 3.9 2.2 intergenic not near genes chr3L_11_8695001 chr3L_8695001 0.27 RAL-774_125 261 chr3L 8936839 8936988 BS 4996 5075 5 149 '4-1 66.73 4.7 0.9 intron CG43783 - chr3L_5_8935001 chr3L_8935001 0.80 RAL-774_125 262 chr3L 9123632 9123783 I-element 5346 9 21 151 '8-13 67.33 3.7 4.5 intron bol - chr3L_21_9120001 chr3L_9120001 0.38 RAL-774_125 263 chr3L 9419484 9419641 S-element 1705 1714 10 157 '3-7 66.87 4.4 1.9 intron CG3967 - chr3L_10_9415001 chr3L_9415001 0.30 RAL-774_125 264 chr3L 9672939 9673098 roo 8682 407 18 159 '7-11 64.84 4.9 3.1 intron fry - chr3L_18_9670001 chr3L_9670001 0.39 RAL-774_125 265 chr3L 10049741 10049918 blood 369 7011 25 177 '12-13 63.89 2.6 6.9 intron dpr6 + chr3L_25_10045001 chr3L_10045001 0.48 RAL-774_125 266 chr3L 10085567 10085614 17.6 429 476 6 47 '4-2 67.73 2.9 1.5 intron dpr6 + chr3L_6_10085001 chr3L_10085001 0.67 RAL-774_125 267 chr3L 10169952 10170109 Transpac 5214 4929 25 157 '11-14 65.64 4.7 4.4 intron dpr10 - chr3L_25_10165001 chr3L_10165001 0.44 RAL-774_125 268 chr3L 10510258 10510446 opus 5 7500 20 188 '6-14 63.65 5.1 3.3 intron A2bp1 + chr3L_20_10510001 chr3L_10510001 0.30 RAL-774_125 269 chr3L 11187822 11187965 jockey 61 4988 23 143 '10-13 63.34 4.8 4.0 intron GlcAT-P - chr3L_23_11185001 chr3L_11185001 0.43 RAL-774_125 270 chr3L 11300661 11300747 pogo 25 2050 4 86 '2-2 65.56 3.9 0.8 intergenic not near genes chr3L_4_11300001 chr3L_11300001 0.50 RAL-774_125 271 chr3L 11469545 11469703 flea 4770 245 17 158 '9-8 66.11 5.4 2.7 intergenic not near genes chr3L_17_11465001 chr3L_11465001 0.53 RAL-774_125 272 chr3L 11664544 11664681 297 387 6599 9 137 '3-6 64.82 3.8 1.9 intron CG32085 - chr3L_9_11660001 chr3L_11660001 0.33 RAL-774_125 273 chr3L 11819092 11819247 17.6 6942 7412 21 155 '16-5 67.26 5.5 3.2 intron CG5946 - chr3L_21_11815001 chr3L_11815001 0.76 RAL-774_125 274 chr3L 12004770 12004934 roo 408 8680 25 164 '12-13 68.51 4.9 4.2 intron CG6928 + chr3L_25_12000001 chr3L_12000001 0.48 RAL-774_125 275 chr3L 12226932 12226992 BS 12 61 12 60 '6-6 67.30 8.7 1.2 intron app - chr3L_12_12225001 chr3L_12225001 0.50 RAL-774_125 276 chr3L 12380389 12380535 I-element 4874 5337 22 146 '16-6 63.92 5.6 3.3 intron Ncc69 - chr3L_22_12380001 chr3L_12380001 0.73 RAL-774_125 277 chr3L 12863646 12863807 Transpac 4928 5222 15 161 '13-2 66.24 5.7 2.2 intergenic not near genes chr3L_15_12860001 chr3L_12860001 0.87 RAL-774_125 278 chr3L 12952017 12952149 Juan 4076 4195 4 132 '1-3 61.15 2.1 1.3 intergenic not near genes chr3L_4_12950001 chr3L_12950001 0.25 RAL-774_125 279 chr3L 13450146 13450314 P-element 2881 1 23 168 '13-10 50.50 6.3 3.2 exon CG10133 - chr3L_23_13450001 chr3L_13450001 0.57 RAL-774_125 280 chr3L 13598664 13598780 hobo 2892 8 15 116 '5-10 64.47 6.8 1.9 intron bru-3 - chr3L_15_13595001 chr3L_13595001 0.33 RAL-774_125 281 chr3L 13688159 13688203 jockey 4825 4762 4 44 '1-3 66.75 3.4 0.9 intron bru-3 - chr3L_4_13685001 chr3L_13685001 0.25 RAL-774_125 282 chr3L 14221734 14221905 blood 376 9 24 171 '8-16 63.23 4.5 4.4 intron nuf + chr3L_24_14220001 chr3L_14220001 0.33 RAL-774_125 283 chr3L 14257535 14257673 297 14 6950 10 138 '3-7 67.16 4.8 1.7 intergenic not near genes chr3L_10_14255001 chr3L_14255001 0.30 RAL-774_125 284 chr3L 14761941 14762110 P-element 2881 3 23 169 '10-13 55.75 6.1 3.2 intergenic CG9384 +,CG33260 - chr3L_23_14760001 chr3L_14760001 0.43 RAL-774_125 285 chr3L 14822804 14822957 mdg1 7444 7045 18 153 '12-6 66.36 3.7 3.8 intron CG17839 + chr3L_18_14820001 chr3L_14820001 0.67 RAL-774_125 286 chr3L 14912873 14912937 blood 3 7076 20 64 '7-13 67.47 8.0 2.2 intron DCX-EMAP + chr3L_20_14910001 chr3L_14910001 0.35 RAL-774_125 287 chr3L 15035088 15035244 pogo 2088 13 29 156 '16-13 66.47 6.1 4.1 intron Sytbeta - chr3L_29_15035001 chr3L_15035001 0.55 RAL-774_125 288 chr3L 15216224 15216380 Burdock 6378 13 26 156 '11-15 68.45 4.3 4.9 intergenic not near genes chr3L_26_15215001 chr3L_15215001 0.42 RAL-774_125 289 chr3L 15462699 15462860 flea 248 13 8 161 '1-7 67.59 6.0 1.1 intergenic not near genes chr3L_8_15460001 chr3L_15460001 0.12 RAL-774_125 290 chr3L 15789947 15790122 blood 7382 7016 19 175 '5-14 67.45 5.1 3.1 intergenic not near genes chr3L_19_15785001 chr3L_15785001 0.26 RAL-774_125 291 chr3L 15894414 15894570 hobo 5 2931 22 156 '15-7 67.07 6.8 2.8 intron pHCl - chr3L_22_15890001 chr3L_15890001 0.68 RAL-774_125 292 chr3L 16128006 16128148 1360 19 3371 32 142 '15-17 65.46 6.7 4.2 intron Pgm - chr3L_32_16125001 chr3L_16125001 0.47 RAL-774_125 293 chr3L 16297385 16297429 I-element 5336 5292 7 44 '4-3 60.88 9.3 0.7 intergenic not near genes chr3L_7_16295001 chr3L_16295001 0.57 RAL-774_125 294 chr3L 16438903 16439012 roo 341 5 19 109 '9-10 68.41 3.4 4.3 intron,intron CG33158 +,dsx-c73A - chr3L_19_16435001 chr3L_16435001 0.47 RAL-774_125 295 chr3L 16478692 16478803 297 6617 6965 4 111 '1-3 68.29 3.7 0.9 intron,intron CG33158 +,aos - chr3L_4_16475001 chr3L_16475001 0.25 RAL-774_125 296 chr3L 16556008 16556150 roo 8676 9045 27 142 '11-16 63.77 5.6 4.1 intergenic not near genes chr3L_27_16555001 chr3L_16555001 0.41 RAL-774_125 297 chr3L 16633093 16633259 roo 6 397 25 166 '9-16 66.99 7.8 2.8 intron Abl - chr3L_25_16630001 chr3L_16630001 0.36 RAL-774_125 298 chr3L 16919714 16919858 R1A1-element 4886 5310 30 144 '14-16 65.44 6.3 4.1 intron Lmpt + chr3L_30_16915001 chr3L_16915001 0.47 RAL-774_125 299 chr3L 16984282 16984458 flea 4762 255 16 176 '14-2 69.27 3.6 3.5 intron Exn + chr3L_16_16980001 chr3L_16980001 0.88 RAL-774_125 300 chr3L 17244729 17244882 pogo 2095 25 22 153 '15-7 64.50 6.2 3.1 3` UTR CG7707 + chr3L_22_17240001 chr3L_17240001 0.68 RAL-774_125 301 chr3L 17255462 17255517 pogo 65 10 12 55 '8-4 70.53 7.4 1.4 intron CR43870 + chr3L_12_17255001 chr3L_17255001 0.67 RAL-774_125 302 chr3L 17301140 17301286 hopper 30 1411 19 146 '2-17 67.10 4.4 3.5 intergenic not near genes chr3L_19_17300001 chr3L_17300001 0.11 RAL-774_125 303 chr3L 17704068 17704116 F-element 23 77 10 48 '4-6 66.03 5.6 1.5 intron Ccn + chr3L_10_17700001 chr3L_17700001 0.40 RAL-774_125 304 chr3L 18074418 18074505 flea 24 4944 4 87 '3-1 70.80 7.7 0.5 intergenic not near genes chr3L_4_18070001 chr3L_18070001 0.75 RAL-774_125 305 chr3L 18081680 18081744 F-element 19 83 10 64 '6-4 68.46 5.7 1.5 intron CR43253 - chr3L_10_18080001 chr3L_18080001 0.60 RAL-774_125 306 chr3L 18174101 18174261 pogo 10 2095 20 160 '10-10 64.95 4.9 3.4 intron W - chr3L_20_18170001 chr3L_18170001 0.50 RAL-774_125 307 chr3L 18188268 18188370 Juan 4202 4080 5 102 '3-2 60.96 2.2 1.6 intergenic not near genes chr3L_5_18185001 chr3L_18185001 0.60 RAL-774_125 308 chr3L 18204759 18204864 Transpac 4918 242 12 105 '8-4 61.10 3.1 2.9 intergenic not near genes chr3L_12_18200001 chr3L_18200001 0.67 RAL-774_125 309 chr3L 18440570 18440721 roo 407 8666 14 151 '4-10 57.25 4.2 2.7 intergenic CR43280 + chr3L_14_18440001 chr3L_18440001 0.29 RAL-774_125 310 chr3L 18500937 18501079 jockey 4734 4979 28 142 '17-11 62.54 7.4 3.3 intron AstC-R2 - chr3L_28_18500001 chr3L_18500001 0.61 RAL-774_125 311 chr3L 18544710 18544856 mdg1 398 12 13 146 '9-4 67.92 3.6 2.8 intergenic not near genes chr3L_13_18540001 chr3L_18540001 0.69 RAL-774_125 312 chr3L 18555405 18555562 opus 7491 8 18 157 '7-11 68.16 6.7 2.3 intergenic not near genes chr3L_18_18555001 chr3L_18555001 0.39 RAL-774_125 313 chr3L 18562006 18562171 roo 4 398 20 165 '10-10 66.06 6.6 2.6 intron AstC-R1 + chr3L_20_18560001 chr3L_18560001 0.50 RAL-774_125 314 chr3L 18959903 18959976 BS 4996 5061 15 73 '8-7 63.19 7.0 1.9 intergenic not near genes chr3L_15_18955001 chr3L_18955001 0.53 RAL-774_125 315 chr3L 19116001 19116074 BS 63 1 14 73 '6-8 66.82 9.9 1.3 intron CG14082 - chr3L_14_19115001 chr3L_19115001 0.43 RAL-774_125 316 chr3L 19274764 19274817 transib2 5 50 15 53 '8-7 63.87 7.6 1.7 intergenic not near genes chr3L_15_19270001 chr3L_19270001 0.53 RAL-774_125 317 chr3L 19339313 19339457 Tc1 1624 21 8 144 '1-7 65.76 3.1 2.0 intergenic not near genes chr3L_8_19335001 chr3L_19335001 0.12 RAL-774_125 318 chr3L 19429882 19430001 BS 5000 5063 10 119 '7-3 66.39 4.8 1.7 intergenic not near genes chr3L_10_19425001 chr3L_19425001 0.70 RAL-774_125 319 chr3L 19454711 19454840 McClintock 5972 446 8 129 '4-4 64.06 3.6 1.7 intergenic CR45434 + chr3L_8_19450001 chr3L_19450001 0.50 RAL-774_125 320 chr3L 19519423 19519579 roo 397 8930 24 156 '9-15 66.30 6.8 3.1 intergenic Cpr76Bb + chr3L_24_19515001 chr3L_19515001 0.38 RAL-774_125 321 chr3L 19951150 19951306 Ivk 6 5367 19 156 '12-7 66.56 4.5 3.5 intron Ac76E + chr3L_19_19950001 chr3L_19950001 0.63 RAL-774_125 322 chr3L 19959075 19959243 roo 8669 401 18 168 '10-8 68.67 4.7 3.2 intron Ac76E + chr3L_18_19955001 chr3L_19955001 0.56 RAL-774_125 323 chr3L 20072735 20072800 X-element 4587 4582 6 65 '4-2 59.60 6.2 0.8 intron sNPF-R - chr3L_6_20070001 chr3L_20070001 0.67 RAL-774_125 324 chr3L 20224111 20224264 Chimpo 170 7 19 153 '10-9 66.65 6.2 2.6 intron CG17147 + chr3L_19_20220001 chr3L_20220001 0.53 RAL-774_125 325 chr3L 20287302 20287453 hopper 1411 14 12 151 '6-6 66.89 5.5 1.8 intron gogo - chr3L_12_20285001 chr3L_20285001 0.50 RAL-774_125 326 chr3L 20871460 20871599 pogo 2079 8 21 139 '15-6 63.29 6.6 2.8 intron CG32432 - chr3L_21_20870001 chr3L_20870001 0.71 RAL-774_125 327 chr3L 20886324 20886436 hobo 2909 16 13 112 '3-10 65.13 5.4 2.0 intergenic not near genes chr3L_13_20885001 chr3L_20885001 0.23 RAL-774_125 328 chr3L 21052768 21052825 copia 4931 4874 6 57 '2-4 65.20 6.6 0.8 intron siz + chr3L_6_21050001 chr3L_21050001 0.33 RAL-774_125 329 chr3L 21349327 21349453 S-element 1713 1706 12 126 '4-8 63.26 4.4 2.2 intron CG32436 + chr3L_12_21345001 chr3L_21345001 0.33 RAL-774_125 330 chr3L 21840760 21840920 P-element 6 12 32 160 '15-17 48.67 6.8 4.1 intron P5CDh1 - chr3L_32_21840001 chr3L_21840001 0.47 RAL-774_125 331 chr3L 21871109 21871230 opus 494 158 16 121 '12-4 63.92 4.2 3.1 intron mub + chr3L_16_21870001 chr3L_21870001 0.75 RAL-774_125 332 chr3L 21881110 21881168 invader2 210 5010 14 58 '7-7 57.88 7.7 1.6 intron mub + chr3L_14_21880001 chr3L_21880001 0.50 RAL-774_125 333 chr3L 22108051 22108209 Transpac 5216 6 18 158 '11-7 65.49 4.8 3.1 intergenic not near genes chr3L_18_22105001 chr3L_22105001 0.61 RAL-774_125 334 chr3L 22227129 22227266 copia 227 4870 16 137 '5-11 65.73 5.5 2.5 intron olf413 + chr3L_16_22225001 chr3L_22225001 0.31 RAL-774_125 335 chr3L 22522457 22522513 Doc 11 74 17 56 '9-8 64.53 10.8 1.4 intergenic not near genes chr3L_17_22520001 chr3L_22520001 0.53 RAL-774_125 336 chr3L 22615170 22615314 jockey 4982 22 18 144 '10-8 67.63 5.1 3.0 intron CG14459 - chr3L_18_22615001 chr3L_22615001 0.56 RAL-774_125 337 chr3L 22635648 22635791 hopper 1405 1391 7 143 '4-3 61.62 6.5 0.9 intron CG14459 - chr3L_7_22635001 chr3L_22635001 0.57 RAL-774_125 338 chr3L 22744692 22744733 FB 73 27 5 41 '3-2 74.57 1.2 2.3 intron CG7369 + chr3L_5_22740001 chr3L_22740001 0.60 RAL-774_125 339 chr3L 23079620 23079688 Stalker 6928 6855 9 68 '4-5 68.34 7.7 1.0 intergenic not near genes chr3L_9_23075001 chr3L_23075001 0.44 RAL-774_125 340 chr3L 23079622 23079679 Stalker4 7033 20 6 57 '4-2 67.35 7.5 0.7 intergenic not near genes chr3L_6_23075001 chr3L_23075001 0.67 RAL-774_125 341 chr3L 23143329 23143384 gypsy 7039 6996 8 55 '1-7 66.30 6.7 1.0 intergenic not near genes chr3L_8_23140001 chr3L_23140001 0.12 RAL-774_125 342 chr3L 23236456 23236613 Stalker2 7646 14 22 157 '12-10 65.48 7.6 2.6 intron nAChRalpha4 + chr3L_22_23235001 chr3L_23235001 0.55 RAL-774_125 343 chr3L 23257453 23257614 blood 16 7385 28 161 '14-14 62.98 4.9 4.7 intron nAChRalpha4 + chr3L_28_23255001 chr3L_23255001 0.50 RAL-774_125 344 chr3L 23456043 23456282 1360 3384 3361 7 239 '1-6 55.18 4.4 1.3 intergenic not near genes chr3L_7_23455001 chr3L_23455001 0.14 RAL-774_125 345 chr3L 23839699 23839747 17.6 63 6942 8 48 '1-7 63.35 5.3 1.3 intergenic CG40470 - chr3L_8_23835001 chr3L_23835001 0.12 RAL-774_125 346 chr3L 23854714 23854864 297 6972 17 16 150 '7-9 69.55 13.0 1.1 intron CG40470 - chr3L_16_23850001 chr3L_23850001 0.44 RAL-774_125 347 chr3L 25232765 25232865 accord2 7598 30 6 100 '3-3 57.21 8.9 0.6 intergenic not near genes chr3L_6_25230001 chr3L_25230001 0.50 RAL-774_125 348 chr3L 25272505 25272565 1360 19 92 6 60 '2-4 65.43 2.7 1.6 intron CG40467 - chr3L_6_25270001 chr3L_25270001 0.33 RAL-774_125 349 chr3L 25414139 25414283 blood 363 7019 21 144 '10-11 67.55 5.1 3.4 intergenic not near genes chr3L_21_25410001 chr3L_25410001 0.48 RAL-774_125 350 chr3L 25455083 25455129 HMS-Beagle2 6905 6905 5 46 '1-4 68.60 5.1 0.8 intergenic not near genes chr3L_5_25455001 chr3L_25455001 0.20 RAL-774_125 351 chr3L 25752746 25752922 Transpac 5 5228 30 176 '13-17 66.95 7.4 3.6 intergenic CG17374 - chr3L_30_25750001 chr3L_25750001 0.43 RAL-774_125 352 chr3L 27174864 27175009 pogo 2095 37 22 145 '10-12 64.82 4.0 4.4 intergenic not near genes chr3L_22_27170001 chr3L_27170001 0.45 RAL-774_125 353 chr3R 563936 563993 HMS-Beagle 6867 6805 5 57 '3-2 71.57 3.8 1.0 intergenic not near genes chr3R_5_560001 chr3R_560001 0.60 RAL-774_125 354 chr3R 1704522 1704594 Max-element 8522 10 5 72 '4-1 55.49 1.6 1.9 intergenic not near genes chr3R_5_1700001 chr3R_1700001 0.80 RAL-774_125 355 chr3R 2275580 2275703 opus 7053 7498 10 123 '4-6 72.49 4.6 1.8 intergenic not near genes chr3R_10_2275001 chr3R_2275001 0.40 RAL-774_125 356 chr3R 4514501 4514640 Tabor 31 7313 23 139 '11-12 66.61 5.6 3.5 intron CG34357 - chr3R_23_4510001 chr3R_4510001 0.48 RAL-774_125 357 chr3R 4538800 4538909 roo 395 53 4 109 '3-1 61.23 3.6 0.9 intron CG34357 - chr3R_4_4535001 chr3R_4535001 0.75 RAL-774_125 358 chr3R 4549182 4549349 1731 312 10 11 167 '4-7 66.65 4.5 2.0 intron CG34357 - chr3R_11_4545001 chr3R_4545001 0.36 RAL-774_125 359 chr3R 4553300 4553446 Juan 4152 8 7 146 '3-4 65.76 2.7 1.9 intron CG34357 - chr3R_7_4550001 chr3R_4550001 0.43 RAL-774_125 360 chr3R 4554263 4554428 Bari1 1698 11 15 165 '10-5 69.13 6.0 2.1 intron CG34357 - chr3R_15_4550001 chr3R_4550001 0.67 RAL-774_125 361 chr3R 5219172 5219243 Doc 7 75 9 71 '5-4 72.19 7.7 1.0 intron Prosbeta2R2 - chr3R_9_5215001 chr3R_5215001 0.56 RAL-774_125 362 chr3R 5765791 5766109 297 27 6971 17 318 '16-1 63.73 5.9 2.5 intron CG2082 - chr3R_17_5765001 chr3R_5765001 0.94 RAL-774_125 363 chr3R 5846735 5846800 jockey 4998 4918 12 65 '8-4 63.75 13.6 0.8 intergenic CG1213 +,CG14676 + chr3R_12_5845001 chr3R_5845001 0.67 RAL-774_125 364 chr3R 5934484 5934612 roo 21 385 18 128 '12-6 66.27 6.5 2.4 intron CG34113 - chr3R_18_5930001 chr3R_5930001 0.67 RAL-774_125 365 chr3R 6404992 6405154 297 6586 386 23 162 '13-10 65.84 5.8 3.4 intron Dmtn - chr3R_23_6400001 chr3R_6400001 0.57 RAL-774_125 366 chr3R 6419100 6419147 Rt1a 5023 5058 6 47 '2-4 71.07 3.9 1.2 intron gpp + chr3R_6_6415001 chr3R_6415001 0.33 RAL-774_125 367 chr3R 6551987 6552148 mdg1 7046 409 19 161 '6-13 69.24 3.4 4.3 intron dpr11 - chr3R_19_6550001 chr3R_6550001 0.32 RAL-774_125 368 chr3R 6688061 6688198 roo 9060 22 20 137 '8-12 62.02 6.2 2.8 intergenic Ccp84Ag + chr3R_20_6685001 chr3R_6685001 0.40 RAL-774_125 369 chr3R 6813630 6813773 copia 4903 252 21 143 '11-10 64.86 6.2 2.9 intron CR42651 - chr3R_21_6810001 chr3R_6810001 0.52 RAL-774_125 370 chr3R 6831620 6831786 roo 402 8672 19 166 '4-15 66.79 4.0 3.8 intron Scr - chr3R_19_6830001 chr3R_6830001 0.21 RAL-774_125 371 chr3R 6859473 6859522 F-element 306 365 11 49 '4-7 62.07 5.9 1.6 intergenic not near genes chr3R_11_6855001 chr3R_6855001 0.36 RAL-774_125 372 chr3R 7100954 7101101 pogo 2082 18 28 147 '15-13 65.40 6.5 3.7 intron Alh - chr3R_28_7100001 chr3R_7100001 0.54 RAL-774_125 373 chr3R 7492364 7492524 1360 3376 6 33 160 '13-20 67.95 5.1 5.4 intron alpha-Est10 - chr3R_33_7490001 chr3R_7490001 0.39 RAL-774_125 374 chr3R 7492492 7492659 Burdock 9 249 27 167 '21-6 64.11 2.9 6.9 intron alpha-Est10 - chr3R_27_7490001 chr3R_7490001 0.78 RAL-774_125 375 chr3R 7780274 7780422 Max-element 8234 8512 12 148 '4-8 63.43 5.6 1.8 intergenic not near genes chr3R_12_7780001 chr3R_7780001 0.33 RAL-774_125 376 chr3R 8077895 8077950 F-element 30 85 17 55 '6-11 63.76 8.0 1.9 intron mAChR-B + chr3R_17_8075001 chr3R_8075001 0.35 RAL-774_125 377 chr3R 8458981 8459132 roo 18 397 25 151 '7-18 64.50 4.0 5.0 intron CG45263 - chr3R_25_8455001 chr3R_8455001 0.28 RAL-774_125 378 chr3R 8460799 8460859 jockey 84 12 5 60 '2-3 71.13 5.4 0.8 intron CG45263 - chr3R_5_8460001 chr3R_8460001 0.40 RAL-774_125 379 chr3R 8582944 8583080 Juan 4206 4185 5 136 '2-3 62.34 6.0 0.7 intron 5-HT2B + chr3R_5_8580001 chr3R_8580001 0.40 RAL-774_125 380 chr3R 8611021 8611177 297 386 6599 16 156 '8-8 66.83 3.6 3.5 intron 5-HT2B + chr3R_16_8610001 chr3R_8610001 0.50 RAL-774_125 381 chr3R 8625237 8625301 jockey 72 17 19 64 '12-7 71.23 10.3 1.7 intron 5-HT2B + chr3R_19_8625001 chr3R_8625001 0.63 RAL-774_125 382 chr3R 8659242 8659390 pogo 2091 11 17 148 '6-11 64.52 6.0 2.4 intron bel - chr3R_17_8655001 chr3R_8655001 0.35 RAL-774_125 383 chr3R 8893841 8894011 roo 402 8668 19 170 '1-18 66.82 5.6 2.9 intron pyd - chr3R_19_8890001 chr3R_8890001 0.05 RAL-774_125 384 chr3R 8915059 8915101 FB 860 666 8 42 '2-6 63.89 20.8 0.4 intron pyd - chr3R_8_8915001 chr3R_8915001 0.25 RAL-774_125 385 chr3R 8929570 8929729 FB 11 7 17 159 '7-10 68.68 4.7 3.0 intron pyd - chr3R_17_8925001 chr3R_8925001 0.41 RAL-774_125 386 chr3R 8946381 8946438 mdg1 7442 352 17 57 '8-9 68.30 6.2 2.4 intergenic not near genes chr3R_17_8945001 chr3R_8945001 0.47 RAL-774_125 387 chr3R 9161599 9161717 pogo 10 2050 11 118 '9-2 65.56 4.8 1.9 intron pum - chr3R_11_9160001 chr3R_9160001 0.82 RAL-774_125 388 chr3R 9192463 9192633 invader3 5189 271 15 170 '7-8 64.24 7.8 1.7 intron pum - chr3R_15_9190001 chr3R_9190001 0.47 RAL-774_125 389 chr3R 9347034 9347196 S-element 1701 1709 23 162 '12-11 67.29 6.4 3.1 intron CG45050 + chr3R_23_9345001 chr3R_9345001 0.52 RAL-774_125 390 chr3R 9347561 9347724 S-element 1709 1702 11 163 '7-4 65.64 4.3 2.1 intron CG45050 + chr3R_11_9345001 chr3R_9345001 0.64 RAL-774_125 391 chr3R 10030680 10030818 BS 5073 5017 18 138 '6-12 65.78 4.7 3.2 intron Mical - chr3R_18_10030001 chr3R_10030001 0.33 RAL-774_125 392 chr3R 10057369 10057532 hopper 1402 1410 23 163 '16-7 65.08 5.1 3.8 intergenic not near genes chr3R_23_10055001 chr3R_10055001 0.70 RAL-774_125 393 chr3R 10428908 10428976 BS 5066 4998 5 68 '2-3 71.68 5.5 0.8 intergenic not near genes chr3R_5_10425001 chr3R_10425001 0.40 RAL-774_125 394 chr3R 10539905 10540009 roo 350 18 16 104 '3-13 64.31 4.7 2.8 intron hth - chr3R_16_10535001 chr3R_10535001 0.19 RAL-774_125 395 chr3R 10685439 10685565 roo 8713 403 5 126 '3-2 70.66 5.7 0.7 intergenic not near genes chr3R_5_10685001 chr3R_10685001 0.60 RAL-774_125 396 chr3R 11085545 11085695 roo 20 398 18 150 '10-8 65.97 4.2 3.5 intergenic CR44940 - chr3R_18_11085001 chr3R_11085001 0.56 RAL-774_125 397 chr3R 11160401 11160451 F-element 82 31 6 50 '4-2 66.52 6.2 0.8 intergenic not near genes chr3R_6_11160001 chr3R_11160001 0.67 RAL-774_125 398 chr3R 11483241 11483377 hobo 25 2931 23 136 '12-11 67.15 4.7 4.0 intergenic not near genes chr3R_23_11480001 chr3R_11480001 0.52 RAL-774_125 399 chr3R 11568645 11568707 BS 5042 5084 10 62 '5-5 63.76 1.2 4.5 intergenic not near genes chr3R_10_11565001 chr3R_11565001 0.50 RAL-774_125 400 chr3R 11647589 11647632 pogo 2046 2089 10 43 '5-5 66.58 8.7 1.0 intron Csk - chr3R_10_11645001 chr3R_11645001 0.50 RAL-774_125 401 chr3R 11987609 11987768 297 388 6596 8 159 '3-5 66.25 3.7 1.7 intron mfas - chr3R_8_11985001 chr3R_11985001 0.38 RAL-774_125 402 chr3R 12146512 12146670 copia 252 4888 21 158 '10-11 64.81 3.7 4.5 intron dpr15 - chr3R_21_12145001 chr3R_12145001 0.48 RAL-774_125 403 chr3R 12167551 12167710 mdg1 411 7051 14 159 '11-3 64.87 3.8 2.9 intergenic not near genes chr3R_14_12165001 chr3R_12165001 0.79 RAL-774_125 404 chr3R 12196884 12197023 Tabor 14 7295 15 139 '8-7 60.97 3.5 3.3 intergenic not near genes chr3R_15_12195001 chr3R_12195001 0.53 RAL-774_125 405 chr3R 12215656 12215763 I-element 1 5297 9 107 '6-3 64.98 5.0 1.5 3` UTR,3` UTR CG4848 -,CG14742 + chr3R_9_12215001 chr3R_12215001 0.67 RAL-774_125 406 chr3R 12329157 12329291 hobo 2909 5 25 134 '8-17 64.81 7.5 2.9 intergenic CR45583 + chr3R_25_12325001 chr3R_12325001 0.32 RAL-774_125 407 chr3R 12369894 12370037 hobo 12 2933 15 143 '11-4 65.36 6.2 2.1 intergenic not near genes chr3R_15_12365001 chr3R_12365001 0.73 RAL-774_125 408 chr3R 12534669 12534833 roo 8671 399 19 164 '10-9 68.78 4.8 3.3 intron Octbeta3R - chr3R_19_12530001 chr3R_12530001 0.53 RAL-774_125 409 chr3R 12618219 12618389 copia 4874 250 28 170 '18-10 65.67 5.2 4.5 intergenic not near genes chr3R_28_12615001 chr3R_12615001 0.64 RAL-774_125 410 chr3R 13173116 13173270 hopper 1408 15 13 154 '7-6 66.99 5.5 2.0 intergenic not near genes chr3R_13_13170001 chr3R_13170001 0.54 RAL-774_125 411 chr3R 13298286 13298448 1360 3383 3383 23 162 '10-13 67.92 5.1 3.8 3` UTR CG8773 + chr3R_23_13295001 chr3R_13295001 0.43 RAL-774_125 412 chr3R 13326403 13326552 opus 498 18 18 149 '13-5 64.44 4.8 3.1 intergenic not near genes chr3R_18_13325001 chr3R_13325001 0.72 RAL-774_125 413 chr3R 13375866 13375951 hopper 73 1396 18 85 '2-16 61.51 8.6 1.9 intron CG9813 - chr3R_18_13375001 chr3R_13375001 0.11 RAL-774_125 414 chr3R 13379159 13379329 hopper 1 1411 19 170 '12-7 63.84 6.3 2.6 intron CG9813 - chr3R_19_13375001 chr3R_13375001 0.63 RAL-774_125 415 chr3R 13530610 13530741 412 472 4 20 131 '6-14 62.26 5.8 2.9 intergenic not near genes chr3R_20_13530001 chr3R_13530001 0.30 RAL-774_125 416 chr3R 13582793 13582841 jockey 58 9 4 48 '3-1 63.10 3.9 0.8 intergenic not near genes chr3R_4_13580001 chr3R_13580001 0.75 RAL-774_125 417 chr3R 13674856 13675022 hobo 1 2934 23 166 '13-10 65.04 5.7 3.4 intergenic CG9588 -,Task6 - chr3R_23_13670001 chr3R_13670001 0.57 RAL-774_125 418 chr3R 13710602 13710775 flea 245 4756 22 173 '8-14 67.99 4.5 4.0 exon,3` UTR primo-1 -,primo-2 - chr3R_22_13710001 chr3R_13710001 0.36 RAL-774_125 419 chr3R 13723575 13723705 FB 30 17 20 130 '10-10 64.97 6.0 2.9 intron CG34383 + chr3R_20_13720001 chr3R_13720001 0.50 RAL-774_125 420 chr3R 13887646 13887764 Burdock 196 6140 24 118 '1-23 64.30 4.3 4.5 intergenic not near genes chr3R_24_13885001 chr3R_13885001 0.04 RAL-774_125 421 chr3R 13983909 13984038 P-element 19 6 14 129 '8-6 51.55 6.7 1.8 intron rdx - chr3R_14_13980001 chr3R_13980001 0.57 RAL-774_125 422 chr3R 14049309 14049464 transib2 6 2816 19 155 '12-7 68.97 5.5 2.9 intergenic not near genes chr3R_19_14045001 chr3R_14045001 0.63 RAL-774_125 423 chr3R 14091593 14091707 I-element 3 5300 11 114 '9-2 64.02 3.3 2.6 intron Npc2b + chr3R_11_14090001 chr3R_14090001 0.82 RAL-774_125 424 chr3R 14449367 14449531 Burdock 2 6382 18 164 '10-8 66.83 7.5 2.1 intron cv-c - chr3R_18_14445001 chr3R_14445001 0.56 RAL-774_125 425 chr3R 14928913 14929017 copia 17 5065 12 104 '8-4 67.02 6.1 1.7 intergenic not near genes chr3R_12_14925001 chr3R_14925001 0.67 RAL-774_125 426 chr3R 14929111 14929215 Transpac 56 5207 13 104 '3-10 62.92 7.5 1.5 intergenic not near genes chr3R_13_14925001 chr3R_14925001 0.23 RAL-774_125 427 chr3R 15039841 15039999 412 12 7535 30 158 '11-19 63.84 3.7 6.4 intergenic CR44944 + chr3R_30_15035001 chr3R_15035001 0.37 RAL-774_125 428 chr3R 15157548 15157722 invader3 6 276 27 174 '17-10 69.98 5.6 4.1 intron Gyc88E + chr3R_27_15155001 chr3R_15155001 0.63 RAL-774_125 429 chr3R 15328707 15328869 P-element 2880 2878 31 162 '17-14 55.58 5.9 4.5 intergenic ea +,CG6236 - chr3R_31_15325001 chr3R_15325001 0.55 RAL-774_125 430 chr3R 15790057 15790113 flea 4751 4720 16 56 '6-10 64.40 13.9 1.1 exon c(3)G - chr3R_16_15790001 chr3R_15790001 0.38 RAL-774_125 431 chr3R 15921056 15921119 hopper 1344 1403 21 63 '11-10 63.61 7.3 2.5 5` UTR CG4221 + chr3R_21_15920001 chr3R_15920001 0.52 RAL-774_125 432 chr3R 16068382 16068441 jockey 66 12 9 59 '3-6 63.50 4.0 1.8 intergenic Mhcl - chr3R_9_16065001 chr3R_16065001 0.33 RAL-774_125 433 chr3R 16346370 16346519 Quasimodo 9 7343 9 149 '7-2 66.77 5.4 1.4 intron CG14879 - chr3R_9_16345001 chr3R_16345001 0.78 RAL-774_125 434 chr3R 16505609 16505757 FB 25 4 17 148 '7-10 62.77 4.7 3.0 intron CG42342 + chr3R_17_16505001 chr3R_16505001 0.41 RAL-774_125 435 chr3R 16567403 16567562 roo 9065 8674 24 159 '9-15 68.87 7.0 3.0 intron CG42342 + chr3R_24_16565001 chr3R_16565001 0.38 RAL-774_125 436 chr3R 16798702 16798770 jockey 4763 4833 11 68 '5-6 66.63 6.6 1.4 intergenic not near genes chr3R_11_16795001 chr3R_16795001 0.45 RAL-774_125 437 chr3R 16799776 16799836 X-element 4687 4622 5 60 '3-2 60.41 5.4 0.8 intergenic not near genes chr3R_5_16795001 chr3R_16795001 0.60 RAL-774_125 438 chr3R 16960608 16960767 Ivk 5369 3 18 159 '6-12 63.29 6.5 2.4 intron Abd-B - chr3R_18_16960001 chr3R_16960001 0.33 RAL-774_125 439 chr3R 17007801 17007936 pogo 37 2091 4 135 '2-2 67.59 8.2 0.4 intergenic CG8907 + chr3R_4_17005001 chr3R_17005001 0.50 RAL-774_125 440 chr3R 17120713 17120888 roo 8666 4 23 175 '9-14 66.74 4.2 4.4 intron,exon cher -,CG34278 + chr3R_23_17120001 chr3R_17120001 0.39 RAL-774_125 441 chr3R 17184485 17184647 copia 4874 242 21 162 '16-5 67.12 3.6 4.6 intron Mur89F - chr3R_21_17180001 chr3R_17180001 0.76 RAL-774_125 442 chr3R 17271935 17272074 hopper 22 1402 13 139 '3-10 63.85 3.7 2.8 intergenic not near genes chr3R_13_17270001 chr3R_17270001 0.23 RAL-774_125 443 chr3R 17733257 17733387 INE-1 543 547 4 130 '1-3 41.97 2.9 1.0 intergenic Lgr1 +,CG14321 + chr3R_4_17730001 chr3R_17730001 0.25 RAL-774_125 444 chr3R 18021911 18022080 pogo 6 2092 24 169 '13-11 64.80 4.4 4.4 intron CG7785 + chr3R_24_18020001 chr3R_18020001 0.54 RAL-774_125 445 chr3R 18051085 18051247 hobo 10 2933 32 162 '17-15 65.11 5.7 4.8 intron htl - chr3R_32_18050001 chr3R_18050001 0.53 RAL-774_125 446 chr3R 18053185 18053287 pogo 12 2069 17 102 '12-5 67.65 5.4 2.7 intergenic htl - chr3R_17_18050001 chr3R_18050001 0.71 RAL-774_125 447 chr3R 18272074 18272231 1360 7 3382 21 157 '15-6 61.48 8.5 2.2 exon Vps39 - chr3R_21_18270001 chr3R_18270001 0.71 RAL-774_125 448 chr3R 18801276 18801424 Quasimodo 7354 14 6 148 '1-5 72.27 3.1 1.5 3` UTR CG18208 - chr3R_6_18800001 chr3R_18800001 0.17 RAL-774_125 449 chr3R 19339393 19339461 G-element 206 272 11 68 '5-6 61.44 3.6 2.4 intergenic not near genes chr3R_11_19335001 chr3R_19335001 0.45 RAL-774_125 450 chr3R 19433750 19433910 Tabor 7312 6847 30 160 '14-16 65.87 7.4 3.6 intron CG31221 + chr3R_30_19430001 chr3R_19430001 0.47 RAL-774_125 451 chr3R 19754982 19755127 diver 218 29 22 145 '17-5 61.29 4.6 3.9 intron GluClalpha + chr3R_22_19750001 chr3R_19750001 0.77 RAL-774_125 452 chr3R 19850923 19851088 mdg3 5250 229 18 165 '12-6 64.36 6.6 2.4 exon CG4662 + chr3R_18_19850001 chr3R_19850001 0.67 RAL-774_125 453 chr3R 20098014 20098167 hobo 7 2921 22 153 '11-11 62.73 5.0 3.7 intergenic not near genes chr3R_22_20095001 chr3R_20095001 0.50 RAL-774_125 454 chr3R 21066287 21066424 copia 232 20 16 137 '6-10 62.07 4.1 3.1 intron AnxB9 + chr3R_16_21065001 chr3R_21065001 0.38 RAL-774_125 455 chr3R 21196975 21197069 hobo 10 2915 10 94 '6-4 66.90 3.8 2.1 intron SNF4Agamma + chr3R_10_21195001 chr3R_21195001 0.60 RAL-774_125 456 chr3R 21297390 21297531 P-element 2880 2878 24 141 '11-13 45.97 7.0 3.0 5` UTR Hsromega + chr3R_24_21295001 chr3R_21295001 0.46 RAL-774_125 457 chr3R 21540146 21540274 pogo 52 2098 15 128 '3-12 66.66 3.3 3.5 intergenic not near genes chr3R_15_21540001 chr3R_21540001 0.20 RAL-774_125 458 chr3R 21697454 21697596 pogo 2079 19 20 142 '7-13 65.37 8.6 2.1 intron CG31176 - chr3R_20_21695001 chr3R_21695001 0.35 RAL-774_125 459 chr3R 21807229 21807389 mdg3 5253 5483 25 160 '16-9 64.90 6.4 3.4 intron CASK - chr3R_25_21805001 chr3R_21805001 0.64 RAL-774_125 460 chr3R 22170965 22171090 Quasimodo 7362 25 11 125 '5-6 70.64 2.9 2.8 intron SKIP + chr3R_11_22170001 chr3R_22170001 0.45 RAL-774_125 461 chr3R 22468907 22469041 hopper 1402 20 18 134 '9-9 64.85 7.5 2.1 intergenic not near genes chr3R_18_22465001 chr3R_22465001 0.50 RAL-774_125 462 chr3R 22486346 22486489 copia 220 2 15 143 '2-13 70.93 4.7 2.6 3` UTR Nrx-1 + chr3R_15_22485001 chr3R_22485001 0.13 RAL-774_125 463 chr3R 22594159 22594315 FB 8 4 14 156 '6-8 61.83 2.7 3.8 intron Efa6 + chr3R_14_22590001 chr3R_22590001 0.43 RAL-774_125 464 chr3R 22895167 22895301 I-element 5320 2 19 134 '10-9 62.40 6.5 2.5 intergenic not near genes chr3R_19_22895001 chr3R_22895001 0.53 RAL-774_125 465 chr3R 22979324 22979427 Juan 4108 4182 9 103 '6-3 63.82 4.2 1.7 intergenic not near genes chr3R_9_22975001 chr3R_22975001 0.67 RAL-774_125 466 chr3R 23020789 23021011 INE-1 578 552 14 222 '4-10 51.94 2.8 3.7 intergenic lmd - chr3R_14_23020001 chr3R_23020001 0.29 RAL-774_125 467 chr3R 23860977 23861049 jockey 4915 4987 12 72 '7-5 64.34 8.7 1.2 3` UTR Pli - chr3R_12_23860001 chr3R_23860001 0.58 RAL-774_125 468 chr3R 24413438 24413493 I-element 5343 5288 10 55 '7-3 64.34 7.1 1.2 intron nAChRalpha1 - chr3R_10_24410001 chr3R_24410001 0.70 RAL-774_125 469 chr3R 24594966 24595119 roo 402 8685 11 153 '1-10 69.59 6.7 1.4 intron mld + chr3R_11_24590001 chr3R_24590001 0.09 RAL-774_125 470 chr3R 25085568 25085719 roo 389 8673 24 151 '11-13 64.94 6.0 3.4 intergenic not near genes chr3R_24_25085001 chr3R_25085001 0.46 RAL-774_125 471 chr3R 25458184 25458335 1360 22 3388 23 151 '10-13 66.75 4.6 4.1 intron Fur1 - chr3R_23_25455001 chr3R_25455001 0.43 RAL-774_125 472 chr3R 25467469 25467584 1360 3368 30 12 115 '7-5 64.93 4.3 2.3 intron Fur1 - chr3R_12_25465001 chr3R_25465001 0.58 RAL-774_125 473 chr3R 25473009 25473140 P-element 2872 8 24 131 '16-8 46.57 5.7 3.6 5` UTR Fur1 - chr3R_24_25470001 chr3R_25470001 0.67 RAL-774_125 474 chr3R 25555061 25555230 hopper 4 3 16 169 '5-11 71.94 4.7 2.8 intron msi + chr3R_16_25555001 chr3R_25555001 0.31 RAL-774_125 475 chr3R 25708456 25708596 hopper 1398 8 10 140 '3-7 68.63 4.8 1.7 intron LpR2 - chr3R_10_25705001 chr3R_25705001 0.30 RAL-774_125 476 chr3R 26180915 26180972 jockey 15 74 7 57 '4-3 67.49 5.9 1.0 intron CG31323 + chr3R_7_26180001 chr3R_26180001 0.57 RAL-774_125 477 chr3R 27112139 27112283 P-element 1 33 21 144 '17-4 54.65 4.6 3.8 5` UTR gb - chr3R_21_27110001 chr3R_27110001 0.81 RAL-774_125 478 chr3R 27556212 27556325 Stalker2 65 416 15 113 '9-6 54.72 6.4 2.0 intron Klp98A - chr3R_15_27555001 chr3R_27555001 0.60 RAL-774_125 479 chr3R 27719669 27719824 Transpac 288 4924 29 155 '9-20 63.65 5.2 4.7 intergenic not near genes chr3R_29_27715001 chr3R_27715001 0.31 RAL-774_125 480 chr3R 27751070 27751215 hobo 2935 14 21 145 '8-13 62.57 6.0 3.0 intergenic not near genes chr3R_21_27750001 chr3R_27750001 0.38 RAL-774_125 481 chr3R 27843822 27843976 mdg3 5265 232 19 154 '15-4 70.00 7.2 2.3 intron CG34353 - chr3R_19_27840001 chr3R_27840001 0.79 RAL-774_125 482 chr3R 28195361 28195501 3S18 331 25 22 140 '10-12 63.03 4.3 4.2 intron CG34354 + chr3R_22_28195001 chr3R_28195001 0.45 RAL-774_125 483 chr3R 28386552 28386712 3S18 5772 6103 16 160 '3-13 67.44 5.9 2.3 intergenic not near genes chr3R_16_28385001 chr3R_28385001 0.19 RAL-774_125 484 chr3R 28397819 28397981 copia 250 4876 19 162 '7-12 67.40 4.5 3.5 intergenic not near genes chr3R_19_28395001 chr3R_28395001 0.37 RAL-774_125 485 chr3R 29073036 29073202 FB 5 6 22 166 '7-15 66.74 6.2 3.1 intron CG11873 + chr3R_22_29070001 chr3R_29070001 0.32 RAL-774_125 486 chr3R 29165207 29165351 1360 3377 8 22 144 '10-12 66.76 5.1 3.6 intergenic CG11897 +,CG11898 + chr3R_22_29165001 chr3R_29165001 0.45 RAL-774_125 487 chr3R 29362624 29362785 roo 407 8 26 161 '13-13 67.18 4.8 4.5 intergenic not near genes chr3R_26_29360001 chr3R_29360001 0.50 RAL-774_125 488 chr3R 29424278 29424338 pogo 2100 2040 4 60 '1-3 69.25 7.5 0.5 intron Ptp99A + chr3R_4_29420001 chr3R_29420001 0.25 RAL-774_125 489 chr3R 29759037 29759152 S-element 7 62 14 115 '10-4 68.57 1.1 6.7 3` UTR CR44953 - chr3R_14_29755001 chr3R_29755001 0.71 RAL-774_125 490 chr3R 30022023 30022150 P-element 2 2853 30 127 '13-17 44.89 4.2 5.8 5` UTR Mgat2 - chr3R_30_30020001 chr3R_30020001 0.43 RAL-774_125 491 chr3R 30074872 30074924 BS 5003 5055 7 52 '3-4 60.08 5.7 1.0 intron sima + chr3R_7_30070001 chr3R_30070001 0.43 RAL-774_125 492 chr3R 30898713 30898771 BS 4993 5039 8 58 '2-6 58.17 0.6 5.0 intron Cyp4c3 + chr3R_8_30895001 chr3R_30895001 0.25 RAL-774_125 493 chr3R 31040762 31040922 mdg1 12 412 20 160 '4-16 64.69 4.4 3.7 intron CanA1 + chr3R_20_31040001 chr3R_31040001 0.20 RAL-774_125 494 chr3R 31667922 31668031 hopper 1412 1414 8 109 '3-5 67.05 4.5 1.5 intergenic not near genes chr3R_8_31665001 chr3R_31665001 0.38 RAL-774_125 495 chr3R 31943090 31943185 I-element 31 5319 12 95 '7-5 66.03 3.8 2.5 intron heph - chr3R_12_31940001 chr3R_31940001 0.58 RAL-774_125 496 chr4 311158 311216 1360 3384 3332 15 58 '7-8 68.89 5.9 2.2 3` UTR Zip102B - chr4_15_310001 chr4_310001 0.47 RAL-774_125 497 chr4 311571 311640 1360 56 2 18 69 '5-13 65.11 6.0 2.6 3` UTR Zip102B - chr4_18_310001 chr4_310001 0.28 RAL-774_125 498 chr4 975327 975490 S-element 1702 6 8 163 '5-3 62.97 5.0 1.3 intron,5` UTR fuss -,sphinx + chr4_8_975001 chr4_975001 0.62 RAL-774_125 499 chrX 657984 658106 S-element 1708 1662 6 122 '5-1 62.16 2.8 1.6 intergenic skpA + chrX_6_655001 chrX_655001 0.83 RAL-774_125 500 chrX 790052 790174 opus 19 7461 5 122 '3-2 65.64 8.4 0.5 5` UTR CG13360 - chrX_5_790001 chrX_790001 0.60 RAL-774_125 501 chrX 1209245 1209387 P-element 12 2873 24 142 '13-11 47.94 6.1 3.4 intergenic not near genes chrX_24_1205001 chrX_1205001 0.54 RAL-774_125 502 chrX 3043185 3043342 297 6 6965 6 157 '5-1 67.60 3.2 1.4 intron kirre + chrX_6_3040001 chrX_3040001 0.83 RAL-774_125 503 chrX 3228388 3228445 jockey 14 17 10 57 '7-3 64.89 2.8 2.6 intron dnc + chrX_10_3225001 chrX_3225001 0.70 RAL-774_125 504 chrX 3550645 3550797 roo 8643 18 22 152 '15-7 62.72 2.7 5.9 intron CG32791 - chrX_22_3550001 chrX_3550001 0.68 RAL-774_125 505 chrX 3692797 3692964 pogo 2090 6 23 167 '8-15 65.11 6.2 3.2 intron Mnt + chrX_23_3690001 chrX_3690001 0.35 RAL-774_125 506 chrX 4336043 4336141 Juan 4085 4181 11 98 '6-5 60.57 2.1 3.5 intron norpA + chrX_11_4335001 chrX_4335001 0.55 RAL-774_125 507 chrX 4350613 4350726 297 375 33 11 113 '6-5 64.22 3.5 2.4 intron norpA + chrX_11_4350001 chrX_4350001 0.55 RAL-774_125 508 chrX 5037851 5038003 1360 2 20 25 152 '14-11 69.47 6.1 3.5 intron CR44833 - chrX_25_5035001 chrX_5035001 0.56 RAL-774_125 509 chrX 5108518 5108677 pogo 22 2098 11 159 '5-6 65.33 3.6 2.4 intron,intron CG15465 +,rg + chrX_11_5105001 chrX_5105001 0.45 RAL-774_125 510 chrX 5113519 5113663 hobo 14 2919 15 144 '10-5 64.12 3.6 3.3 intron,intron CG15465 +,rg + chrX_15_5110001 chrX_5110001 0.67 RAL-774_125 511 chrX 5220723 5220849 297 6924 7 5 126 '3-2 72.00 5.5 0.8 intron,intron CG15465 +,rg + chrX_5_5220001 chrX_5220001 0.60 RAL-774_125 512 chrX 5244831 5244984 hobo 2931 12 11 153 '7-4 68.64 5.1 1.8 intron,intron CG15465 +,rg + chrX_11_5240001 chrX_5240001 0.64 RAL-774_125 513 chrX 5385354 5385447 flea 4960 34 7 93 '2-5 66.00 3.7 1.5 intron SK + chrX_7_5385001 chrX_5385001 0.29 RAL-774_125 514 chrX 6210844 6210988 17.6 3 457 5 144 '2-3 66.56 3.3 1.2 intergenic not near genes chrX_5_6210001 chrX_6210001 0.40 RAL-774_125 515 chrX 6387709 6387866 I-element 4 5344 12 157 '7-5 65.72 2.8 3.2 intergenic not near genes chrX_12_6385001 chrX_6385001 0.58 RAL-774_125 516 chrX 6424292 6424406 roo 8725 403 12 114 '3-9 62.46 2.6 3.3 intron CG42340 - chrX_12_6420001 chrX_6420001 0.25 RAL-774_125 517 chrX 6932633 6932781 I-element 5347 13 15 148 '6-9 64.06 3.4 3.4 intron CG14431 + chrX_15_6930001 chrX_6930001 0.40 RAL-774_125 518 chrX 7031805 7031865 hobo 32 2905 10 60 '7-3 68.73 3.9 2.0 intron CG12541 - chrX_10_7030001 chrX_7030001 0.70 RAL-774_125 519 chrX 7066854 7066969 3S18 6101 49 6 115 '2-4 65.34 3.1 1.5 intergenic not near genes chrX_6_7065001 chrX_7065001 0.33 RAL-774_125 520 chrX 7682650 7682803 HMS-Beagle 10 228 13 153 '8-5 68.54 3.3 3.0 3` UTR CHES-1-like - chrX_13_7680001 chrX_7680001 0.62 RAL-774_125 521 chrX 7944342 7944436 P-element 2882 57 15 94 '6-9 41.47 4.5 2.7 intron,intron CG42593 +,l(1)G0193 - chrX_15_7940001 chrX_7940001 0.40 RAL-774_125 522 chrX 8027387 8027491 Juan 4205 37 11 104 '6-5 56.16 4.3 2.1 3` UTR Tbh + chrX_11_8025001 chrX_8025001 0.55 RAL-774_125 523 chrX 8203837 8203992 pogo 2090 17 30 155 '12-18 61.74 4.6 5.4 intron sdt + chrX_30_8200001 chrX_8200001 0.40 RAL-774_125 524 chrX 8810422 8810585 pogo 2095 15 17 163 '9-8 65.42 5.5 2.6 intergenic not near genes chrX_17_8810001 chrX_8810001 0.53 RAL-774_125 525 chrX 8936741 8936877 FB 30 1 11 136 '4-7 66.52 3.0 2.8 intron rdgA + chrX_11_8935001 chrX_8935001 0.36 RAL-774_125 526 chrX 9432781 9432943 roo 8671 397 20 162 '11-9 67.57 2.3 6.1 intron mgl - chrX_20_9430001 chrX_9430001 0.55 RAL-774_125 527 chrX 9514093 9514228 McClintock 5961 6396 9 135 '6-3 67.21 1.7 3.3 intron CG32700 - chrX_9_9510001 chrX_9510001 0.67 RAL-774_125 528 chrX 9523516 9523582 jockey 4739 4673 10 66 '6-4 64.87 4.8 1.7 intron CG32700 - chrX_10_9520001 chrX_9520001 0.60 RAL-774_125 529 chrX 9788829 9788970 mdg1 416 6 12 141 '9-3 62.35 4.0 2.4 intron CG32698 + chrX_12_9785001 chrX_9785001 0.75 RAL-774_125 530 chrX 10119541 10119674 FB 1 5 6 133 '2-4 64.35 4.0 1.2 intron,intron RhoU +,CR44894 - chrX_6_10115001 chrX_10115001 0.33 RAL-774_125 531 chrX 10720391 10720554 297 6585 6960 12 163 '9-3 68.11 4.2 2.3 intron CG32676 - chrX_12_10720001 chrX_10720001 0.75 RAL-774_125 532 chrX 10823893 10823958 jockey 16 73 6 65 '4-2 74.01 6.0 0.9 intergenic CR45624 + chrX_6_10820001 chrX_10820001 0.67 RAL-774_125 533 chrX 11035973 11036035 roo 72 8673 13 62 '8-5 64.75 5.9 1.9 intron CG42339 - chrX_13_11035001 chrX_11035001 0.62 RAL-774_125 534 chrX 11233438 11233531 jockey 4935 13 9 93 '4-5 69.25 7.3 1.1 intron CG44422 - chrX_9_11230001 chrX_11230001 0.44 RAL-774_125 535 chrX 11278014 11278183 3S18 6102 5766 28 169 '17-11 63.37 4.3 5.3 intron CG44422 - chrX_28_11275001 chrX_11275001 0.61 RAL-774_125 536 chrX 11411724 11411847 roo 42 393 17 123 '9-8 66.85 4.8 2.9 intergenic CG15196 +,Gr10b - chrX_17_11410001 chrX_11410001 0.53 RAL-774_125 537 chrX 11450316 11450455 FB 27 11 18 139 '5-13 65.16 3.1 4.4 intron Evi5 - chrX_18_11450001 chrX_11450001 0.28 RAL-774_125 538 chrX 11476173 11476216 jockey 4832 4789 4 43 '2-2 66.00 7.6 0.5 3` UTR CG43155 + chrX_4_11475001 chrX_11475001 0.50 RAL-774_125 539 chrX 11652377 11652530 blood 8 364 19 153 '13-6 66.69 5.3 3.0 intron Ptp10D + chrX_19_11650001 chrX_11650001 0.68 RAL-774_125 540 chrX 11773629 11773779 roo 399 8685 19 150 '14-5 67.39 3.5 4.2 intron dy - chrX_19_11770001 chrX_11770001 0.74 RAL-774_125 541 chrX 11791604 11791758 Tirant 8122 8505 12 154 '4-8 62.27 3.5 2.7 exon,3` UTR Karl +,CR44962 - chrX_12_11790001 chrX_11790001 0.33 RAL-774_125 542 chrX 11873674 11873816 412 7073 476 17 142 '5-12 65.21 3.0 4.2 intron CG15739 + chrX_17_11870001 chrX_11870001 0.29 RAL-774_125 543 chrX 12098738 12098869 Quasimodo 7327 11 8 131 '2-6 65.17 2.9 2.1 intron,intron CR43960 +,Ten-a + chrX_8_12095001 chrX_12095001 0.25 RAL-774_125 544 chrX 12133185 12133336 17.6 478 6944 6 151 '4-2 68.61 2.9 1.5 intron Ten-a + chrX_6_12130001 chrX_12130001 0.67 RAL-774_125 545 chrX 12157700 12157850 Tirant 11 376 17 150 '9-8 66.10 2.6 4.7 intron Ten-a + chrX_17_12155001 chrX_12155001 0.53 RAL-774_125 546 chrX 12163243 12163390 412 33 7546 8 147 '5-3 68.02 1.9 2.8 intron Ten-a + chrX_8_12160001 chrX_12160001 0.62 RAL-774_125 547 chrX 12568741 12568795 jockey 4683 4709 7 54 '2-5 65.28 6.2 1.0 intergenic CG43921 -,CG11138 - chrX_7_12565001 chrX_12565001 0.29 RAL-774_125 548 chrX 12805738 12805842 412 40 456 12 104 '5-7 60.72 2.8 3.2 intron Pde9 - chrX_12_12805001 chrX_12805001 0.42 RAL-774_125 549 chrX 12893309 12893478 Bari1 1697 5 30 169 '21-9 65.53 5.3 4.8 intron Pde9 - chrX_30_12890001 chrX_12890001 0.70 RAL-774_125 550 chrX 14115560 14115717 roo 9069 21 25 157 '14-11 63.78 3.6 5.4 5` UTR CR44657 + chrX_25_14115001 chrX_14115001 0.56 RAL-774_125 551 chrX 14523581 14523731 Tabor 6860 477 12 150 '6-6 60.77 3.5 2.7 intergenic not near genes chrX_12_14520001 chrX_14520001 0.50 RAL-774_125 552 chrX 14576785 14576941 copia 4882 244 11 156 '4-7 62.88 2.2 3.4 intergenic not near genes chrX_11_14575001 chrX_14575001 0.36 RAL-774_125 553 chrX 14662378 14662537 Bari1 1694 13 36 159 '21-15 65.54 5.1 5.9 intergenic not near genes chrX_36_14660001 chrX_14660001 0.58 RAL-774_125 554 chrX 14858838 14858998 HMS-Beagle 6810 7037 18 160 '5-13 65.88 5.2 2.9 intron Flo2 + chrX_18_14855001 chrX_14855001 0.28 RAL-774_125 555 chrX 15025976 15026114 FB 8 22 21 138 '7-14 61.93 2.6 5.8 intron,intron hiw -,be + chrX_21_15025001 chrX_15025001 0.33 RAL-774_125 556 chrX 15391821 15391878 roo 8673 8736 8 57 '4-4 67.80 7.8 0.9 intron Cngl - chrX_8_15390001 chrX_15390001 0.50 RAL-774_125 557 chrX 15409306 15409468 hopper 1410 9 7 162 '6-1 63.23 3.2 1.7 intron Cngl - chrX_7_15405001 chrX_15405001 0.86 RAL-774_125 558 chrX 15841113 15841163 INE-1 150 145 7 50 '5-2 68.62 5.8 1.0 3` UTR CG8565 + chrX_7_15840001 chrX_15840001 0.71 RAL-774_125 559 chrX 16739008 16739134 flea 4758 4965 7 126 '6-1 66.68 3.0 1.8 intron CG9634 - chrX_7_16735001 chrX_16735001 0.86 RAL-774_125 560 chrX 16954200 16954341 roo 406 8693 17 141 '10-7 69.02 4.7 3.0 intron RhoGAP15B + chrX_17_16950001 chrX_16950001 0.59 RAL-774_125 561 chrX 17284779 17284926 pogo 36 2100 9 147 '3-6 65.97 4.4 1.7 intron CG5445 + chrX_9_17280001 chrX_17280001 0.33 RAL-774_125 562 chrX 17497424 17497596 roo 8676 407 27 172 '14-13 66.88 3.8 5.6 intron CG43658 - chrX_27_17495001 chrX_17495001 0.52 RAL-774_125 563 chrX 17587549 17587675 pogo 31 2074 13 126 '7-6 65.20 3.5 2.9 intron CG12991 + chrX_13_17585001 chrX_17585001 0.54 RAL-774_125 564 chrX 17980468 17980622 hobo 2933 6 18 154 '15-3 64.20 3.2 4.3 intron Sh - chrX_18_17980001 chrX_17980001 0.83 RAL-774_125 565 chrX 18239022 18239086 jockey 4567 4626 9 64 '6-3 63.01 4.3 1.7 intergenic not near genes chrX_9_18235001 chrX_18235001 0.67 RAL-774_125 566 chrX 18239435 18239482 jockey 4941 4988 5 47 '3-2 63.20 3.2 1.2 intergenic not near genes chrX_5_18235001 chrX_18235001 0.60 RAL-774_125 567 chrX 18697296 18697460 roo 401 8674 15 164 '5-10 67.13 4.7 2.6 intergenic not near genes chrX_15_18695001 chrX_18695001 0.33 RAL-774_125 568 chrX 18813233 18813325 P-element 46 2872 14 92 '5-9 42.14 6.1 2.0 intergenic CG42450 + chrX_14_18810001 chrX_18810001 0.36 RAL-774_125 569 chrX 18918268 18918403 Tirant 8141 400 14 135 '6-8 68.25 3.5 3.1 intergenic not near genes chrX_14_18915001 chrX_18915001 0.43 RAL-774_125 570 chrX 18982967 18983091 pogo 35 2076 18 124 '8-10 67.75 3.2 4.3 intron CG43759 + chrX_18_18980001 chrX_18980001 0.44 RAL-774_125 571 chrX 19093985 19094052 roo 403 335 11 67 '6-5 67.61 2.5 3.1 intergenic not near genes chrX_11_19090001 chrX_19090001 0.55 RAL-774_125 572 chrX 19249665 19249736 jockey 4713 4679 8 71 '3-5 64.81 13.3 0.6 intron Hs3st-B + chrX_8_19245001 chrX_19245001 0.38 RAL-774_125 573 chrX 19382140 19382298 FB 4 5 24 158 '12-12 64.13 4.4 4.4 intron kek5 + chrX_24_19380001 chrX_19380001 0.50 RAL-774_125 574 chrX 19458548 19458659 roo 9047 40 15 111 '9-6 65.92 1.3 6.5 intron kek5 + chrX_15_19455001 chrX_19455001 0.60 RAL-774_125 575 chrX 19745646 19745703 Max-element 308 8514 7 57 '2-5 61.23 8.8 0.7 3` UTR,3` UTR CG33932 +,Rpp20 + chrX_7_19745001 chrX_19745001 0.29 RAL-774_125 576 chrX 19849473 19849610 pogo 20 2076 9 137 '5-4 67.06 3.8 1.9 intron pico - chrX_9_19845001 chrX_19845001 0.56 RAL-774_125 577 chrX 20083425 20083584 hopper 16 6 9 159 '2-7 67.85 3.2 2.1 intergenic not near genes chrX_9_20080001 chrX_20080001 0.22 RAL-774_125 578 chrX 20956361 20956409 Burdock 6151 6204 5 48 '2-3 67.43 4.6 0.9 intergenic not near genes chrX_5_20955001 chrX_20955001 0.40 RAL-774_125 579 chrX 20996645 20996691 INE-1 104 99 5 46 '2-3 55.82 4.7 0.9 intergenic not near genes chrX_5_20995001 chrX_20995001 0.40 RAL-774_125 580 chrX 20999552 20999609 BS 8 18 6 57 '2-4 62.91 4.7 1.1 intergenic not near genes chrX_6_20995001 chrX_20995001 0.33 RAL-774_125 581 chrX 21058122 21058281 297 6967 6595 15 159 '7-8 64.55 3.8 3.1 intron bves + chrX_15_21055001 chrX_21055001 0.47 RAL-774_125 582 chrX 21087542 21087680 mdg3 5263 5497 9 138 '8-1 65.87 0.2 7.5 intergenic not near genes chrX_9_21085001 chrX_21085001 0.89 RAL-774_125 583 chrX 21508522 21508673 pogo 4 2079 14 151 '8-6 66.74 6.5 1.9 intron CR45082 - chrX_14_21505001 chrX_21505001 0.57 RAL-774_125 584 chrX 21511440 21511567 gypsy5 385 6969 18 127 '10-8 63.02 4.7 3.2 intron CR45082 - chrX_18_21510001 chrX_21510001 0.56 RAL-774_125 585 chrX 21585264 21585429 mariner2 269 270 5 165 '3-2 58.48 1.2 2.3 intergenic not near genes chrX_5_21585001 chrX_21585001 0.60 RAL-774_125 586 chrX 21668517 21668723 mdg1 7433 409 7 206 '5-2 67.77 1.2 3.2 intergenic not near genes chrX_7_21665001 chrX_21665001 0.71 RAL-774_125 587 chrX 23009907 23010052 Stalker2 384 7260 16 145 '8-8 60.40 3.3 3.7 exon FucTC - chrX_16_23005001 chrX_23005001 0.50 RAL-774_125 588 chrY 311341 311462 1360 38 25 6 121 '5-1 62.49 0.5 4.0 intergenic not near genes chrY_6_310001 chrY_310001 0.83 RAL-774_125 589 chrY 2971679 2971727 HeT-A 6006 6060 5 48 '2-3 67.94 0.0 5.0 intergenic not near genes chrY_5_2970001 chrY_2970001 0.40 RAL-774_125