SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46304 46374 chr2L 46431 46502 9 124 1.0 2.5 1.8 3.2 198 chr2L 46304 intron Cda5 - chr2L 46403 intron Cda5 - chr2L 46502 intron Cda5 - chr2L_9_45001 chr2L_45001 RAL-774_125 2 chr2L 47423 47433 chr2L 52578 52588 jockey 8 5155 13.0 6.0 9.5 0.8 5165 chr2L 47423 intron Cda5 - chr2L 50006 intron Cda5 - chr2L 52588 intron Cda5 - chr2L_8_50001 chr2L_50001 RAL-774_125 3 chr2L 47434 47480 chr2L 52577 52630 jockey 12 5151 7.0 6.0 6.5 1.6 5196 chr2L 47434 intron Cda5 - chr2L 50032 intron Cda5 - chr2L 52630 intron Cda5 - chr2L_12_50001 chr2L_50001 RAL-774_125 4 chr2L 62027 62101 chr2L 62245 62308 10 211 35.0 33.0 34.0 0.3 281 chr2L 62027 intron Cda5 - chr2L 62168 intron Cda5 - chr2L 62308 intron Cda5 - chr2L_10_60001 chr2L_60001 RAL-774_125 5 chr2L 79788 79852 chr2L 80182 80241 15 384 5.0 6.5 5.8 2.2 453 chr2L 79788 intergenic not near genes chr2L 80014 intergenic not near genes chr2L 80241 intergenic not near genes chr2L_15_80001 chr2L_80001 RAL-774_125 6 chr2L 89689 89726 chr2L 89803 89853 7 121 9.5 11.5 10.5 0.6 164 chr2L 89689 intergenic not near genes chr2L 89771 intergenic not near genes chr2L 89853 intergenic not near genes chr2L_7_85001 chr2L_85001 RAL-774_125 7 chr2L 172019 172081 chr2L 172150 172212 6 130 3.0 3.5 3.2 1.4 193 chr2L 172019 intron spen + chr2L 172116 intron spen + chr2L 172212 intron spen + chr2L_6_170001 chr2L_170001 RAL-774_125 8 chr2L 263272 263316 chr2L 263468 263512 5 196 2.0 5.5 3.8 1.0 240 chr2L 263272 intron,3` UTR CG3645 -,CG17075 - chr2L 263392 intron,3` UTR CG3645 -,CG17075 - chr2L 263512 intron,3` UTR CG3645 -,CG17075 - chr2L_5_260001 chr2L_260001 RAL-774_125 9 chr2L 297646 297716 chr2L 297796 297820 10 138 1.0 0.5 0.8 5.6 174 chr2L 297646 intergenic Hop +,Pi3K21B + chr2L 297733 intergenic Pi3K21B +,Hop + chr2L 297820 intergenic Pi3K21B +,Hop + chr2L_10_295001 chr2L_295001 RAL-774_125 10 chr2L 325112 325132 chr2L 325228 325259 6 119 8.0 4.5 6.2 0.8 147 chr2L 325112 intron Plc21C + chr2L 325186 intron Plc21C + chr2L 325259 intron Plc21C + chr2L_6_325001 chr2L_325001 RAL-774_125 11 chr2L 347856 347915 chr2L 355401 355446 blood 14 7545 3.0 2.5 2.8 3.7 7590 chr2L 347856 3` UTR Plc21C + chr2L 351651 intron Plc21C + chr2L 355446 3` UTR Plc21C + chr2L_14_350001 chr2L_350001 RAL-774_125 12 chr2L 371394 371431 chr2L 371523 371560 4 127 3.5 2.5 3.0 1.0 166 chr2L 371394 intergenic not near genes chr2L 371477 intergenic not near genes chr2L 371560 intergenic not near genes chr2L_4_370001 chr2L_370001 RAL-774_125 13 chr2L 407898 407965 chr2L 408029 408096 14 129 3.5 3.0 3.2 3.3 198 chr2L 407898 3` UTR RpI135 + chr2L 407997 intergenic RpI135 +,AP-2alpha - chr2L 408096 3` UTR AP-2alpha - chr2L_14_405001 chr2L_405001 RAL-774_125 14 chr2L 428056 428080 chr2L 428179 428193 7 115 10.0 8.0 9.0 0.7 137 chr2L 428056 intergenic not near genes chr2L 428124 intergenic not near genes chr2L 428193 intergenic not near genes chr2L_7_425001 chr2L_425001 RAL-774_125 15 chr2L 563933 563968 chr2L 564049 564093 11 127 7.0 6.5 6.8 1.4 160 chr2L 563933 intergenic CG11835 -,CG2794 + chr2L 564013 intergenic CG2794 +,CG11835 - chr2L 564093 intergenic CG2794 +,CG11835 - chr2L_11_560001 chr2L_560001 RAL-774_125 16 chr2L 590294 590589 chr2L 590436 590723 20 141 15.0 5.5 10.2 1.8 429 chr2L 590294 intron Gsc - chr2L 590508 intron Gsc - chr2L 590723 intron Gsc - chr2L_20_590001 chr2L_590001 RAL-774_125 17 chr2L 590610 590637 chr2L 590723 590783 9 130 5.0 5.0 5.0 1.5 173 chr2L 590610 intron Gsc - chr2L 590696 intron Gsc - chr2L 590783 intron Gsc - chr2L_9_590001 chr2L_590001 RAL-774_125 18 chr2L 609261 609316 chr2L 609417 609462 11 157 4.5 5.5 5.0 1.8 201 chr2L 609261 intergenic CR43649 - chr2L 609362 intergenic CR43649 - chr2L 609462 intergenic CR43649 - chr2L_11_605001 chr2L_605001 RAL-774_125 19 chr2L 686917 686941 chr2L 695990 696026 roo 8 9085 3.0 6.5 4.8 1.4 9109 chr2L 686917 intron ds - chr2L 691472 intron ds - chr2L 696026 intron ds - chr2L_8_690001 chr2L_690001 RAL-774_125 20 chr2L 736842 736902 chr2L 736997 737057 11 153 2.5 5.0 3.8 2.3 215 chr2L 736842 intergenic Eaat2 - chr2L 736950 intergenic Eaat2 - chr2L 737057 intergenic Eaat2 - chr2L_11_735001 chr2L_735001 RAL-774_125 21 chr2L 763573 763615 chr2L 763689 763736 9 113 3.0 3.5 3.2 2.1 163 chr2L 763573 intergenic not near genes chr2L 763654 intergenic not near genes chr2L 763736 intergenic not near genes chr2L_9_760001 chr2L_760001 RAL-774_125 22 chr2L 770431 770461 chr2L 772251 772287 Bari1 7 1821 8.0 5.5 6.8 0.9 1856 chr2L 770431 intergenic not near genes chr2L 771359 intergenic not near genes chr2L 772287 intergenic CR44614 + chr2L_7_770001 chr2L_770001 RAL-774_125 23 chr2L 849424 849474 chr2L 849565 849603 7 138 2.5 2.5 2.5 2.0 179 chr2L 849424 intron drongo - chr2L 849514 intron drongo - chr2L 849603 intron drongo - chr2L_7_845001 chr2L_845001 RAL-774_125 24 chr2L 877804 877874 chr2L 877930 877991 12 127 2.5 4.5 3.5 2.7 187 chr2L 877804 3` UTR,exon CG15824 -,ninaA + chr2L 877898 3` UTR,intron CG15824 -,ninaA + chr2L 877991 3` UTR,exon CG15824 -,ninaA + chr2L_12_875001 chr2L_875001 RAL-774_125 25 chr2L 922420 922487 chr2L 922551 922616 8 128 3.5 2.0 2.8 2.1 196 chr2L 922420 intergenic CG4341 + chr2L 922518 intergenic CG4341 + chr2L 922616 intergenic CG4341 + chr2L_8_920001 chr2L_920001 RAL-774_125 26 chr2L 931615 931662 chr2L 931736 931791 11 123 5.0 5.0 5.0 1.8 176 chr2L 931615 intron CG4341 + chr2L 931703 intron CG4341 + chr2L 931791 intron CG4341 + chr2L_11_930001 chr2L_930001 RAL-774_125 27 chr2L 971883 971940 chr2L 972006 972040 13 116 4.5 4.0 4.2 2.5 157 chr2L 971883 intergenic not near genes chr2L 971962 intergenic not near genes chr2L 972040 intergenic not near genes chr2L_13_970001 chr2L_970001 RAL-774_125 28 chr2L 976841 976913 chr2L 984527 984599 roo 7 7686 4.0 3.0 3.5 1.6 7758 chr2L 976841 intergenic not near genes chr2L 980720 intergenic not near genes chr2L 984599 intergenic not near genes chr2L_7_980001 chr2L_980001 RAL-774_125 29 chr2L 996679 996716 chr2L 1005823 1005861 roo 4 9145 2.5 1.5 2.0 1.3 9182 chr2L 996679 intergenic not near genes chr2L 1001270 intergenic not near genes chr2L 1005861 intergenic not near genes chr2L_4_1000001 chr2L_1000001 RAL-774_125 30 chr2L 1005859 1005936 chr2L 1005990 1006064 7 132 5.0 6.5 5.8 1.0 205 chr2L 1005859 intergenic not near genes chr2L 1005962 intergenic not near genes chr2L 1006064 intergenic not near genes chr2L_7_1005001 chr2L_1005001 RAL-774_125 31 chr2L 1035527 1035588 chr2L 1035644 1035715 20 125 4.0 2.5 3.2 4.8 188 chr2L 1035527 intron IA-2 - chr2L 1035621 intron IA-2 - chr2L 1035715 intron IA-2 - chr2L_20_1035001 chr2L_1035001 RAL-774_125 32 chr2L 1041058 1041106 chr2L 1041257 1041305 12 196 4.0 0.5 2.2 3.8 247 chr2L 1041058 intron IA-2 - chr2L 1041182 intron IA-2 - chr2L 1041305 intron IA-2 - chr2L_12_1040001 chr2L_1040001 RAL-774_125 33 chr2L 1066049 1066121 chr2L 1066180 1066236 17 127 7.5 5.5 6.5 2.3 187 chr2L 1066049 intron S - chr2L 1066142 intron S - chr2L 1066236 intron S - chr2L_17_1065001 chr2L_1065001 RAL-774_125 34 chr2L 1137612 1137682 chr2L 1137836 1137912 27 229 4.0 4.0 4.0 5.4 300 chr2L 1137612 intron CG4577 + chr2L 1137762 intron CG4577 + chr2L 1137912 intron CG4577 + chr2L_27_1135001 chr2L_1135001 RAL-774_125 35 chr2L 1156818 1156890 chr2L 1156973 1157035 16 153 2.5 7.5 5.0 2.7 217 chr2L 1156818 intron capt - chr2L 1156926 intron capt - chr2L 1157035 intron capt - chr2L_16_1155001 chr2L_1155001 RAL-774_125 36 chr2L 1220093 1220159 chr2L 1227602 1227635 blood 19 7512 7.0 3.0 5.0 3.2 7542 chr2L 1220093 intron CG42329 + chr2L 1223864 intron CG42329 + chr2L 1227635 intron CG42329 + chr2L_19_1220001 chr2L_1220001 RAL-774_125 37 chr2L 1261212 1261259 chr2L 1261343 1261389 5 124 0.0 2.5 1.2 2.3 177 chr2L 1261212 intron robo3 + chr2L 1261300 intron robo3 + chr2L 1261389 intron robo3 + chr2L_5_1260001 chr2L_1260001 RAL-774_125 38 chr2L 1282744 1282822 chr2L 1282890 1282968 11 143 3.5 4.0 3.8 2.3 224 chr2L 1282744 intron robo3 + chr2L 1282856 intron robo3 + chr2L 1282968 intron robo3 + chr2L_11_1280001 chr2L_1280001 RAL-774_125 39 chr2L 1316525 1316584 chr2L 1316656 1316712 12 129 4.0 2.0 3.0 3.0 187 chr2L 1316525 intergenic not near genes chr2L 1316618 intergenic not near genes chr2L 1316712 intergenic not near genes chr2L_12_1315001 chr2L_1315001 RAL-774_125 40 chr2L 1320245 1320301 chr2L 1320356 1320429 11 114 1.5 4.0 2.8 2.9 184 chr2L 1320245 intergenic not near genes chr2L 1320337 intergenic not near genes chr2L 1320429 intergenic not near genes chr2L_11_1320001 chr2L_1320001 RAL-774_125 41 chr2L 1321996 1322016 chr2L 1322135 1322155 4 138 8.0 3.0 5.5 0.6 159 chr2L 1321996 intergenic not near genes chr2L 1322076 intergenic not near genes chr2L 1322155 intergenic not near genes chr2L_4_1320001 chr2L_1320001 RAL-774_125 42 chr2L 1322017 1322042 chr2L 1322115 1322181 7 133 6.5 2.0 4.2 1.3 164 chr2L 1322017 intergenic not near genes chr2L 1322099 intergenic not near genes chr2L 1322181 intergenic not near genes chr2L_7_1320001 chr2L_1320001 RAL-774_125 43 chr2L 1332200 1332220 chr2L 1332302 1332333 5 107 7.5 6.0 6.8 0.6 133 chr2L 1332200 intergenic not near genes chr2L 1332266 intergenic not near genes chr2L 1332333 intergenic not near genes chr2L_5_1330001 chr2L_1330001 RAL-774_125 44 chr2L 1339336 1339379 chr2L 1339487 1339529 6 151 0.0 2.5 1.2 2.7 193 chr2L 1339336 intergenic not near genes chr2L 1339432 intergenic not near genes chr2L 1339529 intergenic not near genes chr2L_6_1335001 chr2L_1335001 RAL-774_125 45 chr2L 1399051 1399101 chr2L 1399204 1399254 10 153 3.0 4.5 3.8 2.1 203 chr2L 1399051 intron lea - chr2L 1399152 intron lea - chr2L 1399254 intron lea - chr2L_10_1395001 chr2L_1395001 RAL-774_125 46 chr2L 1444220 1444284 chr2L 1444399 1444441 5 173 0.0 9.0 4.5 0.9 221 chr2L 1444220 intergenic CG43402 + chr2L 1444330 intergenic CG43402 + chr2L 1444441 intergenic not near genes chr2L_5_1440001 chr2L_1440001 RAL-774_125 47 chr2L 1529063 1529073 chr2L 1529204 1529213 4 141 6.0 6.0 6.0 0.6 150 chr2L 1529063 intergenic not near genes chr2L 1529138 intergenic not near genes chr2L 1529213 intergenic not near genes chr2L_4_1525001 chr2L_1525001 RAL-774_125 48 chr2L 1536458 1536521 chr2L 1536635 1536703 7 179 0.5 3.0 1.8 2.5 245 chr2L 1536458 intergenic not near genes chr2L 1536580 intergenic not near genes chr2L 1536703 intergenic not near genes chr2L_7_1535001 chr2L_1535001 RAL-774_125 49 chr2L 1570652 1570716 chr2L 1573574 1573632 F-element 12 2921 4.0 4.0 4.0 2.4 2980 chr2L 1570652 intron haf + chr2L 1572142 intron haf + chr2L 1573632 intron haf + chr2L_12_1570001 chr2L_1570001 RAL-774_125 50 chr2L 1590916 1590980 chr2L 1591036 1591106 11 113 4.5 6.0 5.2 1.8 190 chr2L 1590916 intron haf + chr2L 1591011 intron haf + chr2L 1591106 intron haf + chr2L_11_1590001 chr2L_1590001 RAL-774_125 51 chr2L 1599927 1599934 chr2L 1600053 1600065 4 128 7.5 4.5 6.0 0.6 138 chr2L 1599927 intron,intron haf +,CG31935 - chr2L 1599996 intron,intron haf +,CG31935 - chr2L 1600065 intron,intron haf +,CG31935 - chr2L_4_1595001 chr2L_1595001 RAL-774_125 52 chr2L 1599937 1599996 chr2L 1600046 1600118 8 117 2.0 4.0 3.0 2.0 181 chr2L 1599937 intron,intron haf +,CG31935 - chr2L 1600028 intron,intron haf +,CG31935 - chr2L 1600118 intron,intron haf +,CG31935 - chr2L_8_1600001 chr2L_1600001 RAL-774_125 53 chr2L 1615339 1615403 chr2L 1615471 1615535 8 127 0.0 3.0 1.5 3.2 196 chr2L 1615339 intergenic not near genes chr2L 1615437 intergenic not near genes chr2L 1615535 intergenic not near genes chr2L_8_1615001 chr2L_1615001 RAL-774_125 54 chr2L 1620271 1620288 chr2L 1620391 1620414 4 123 0.0 10.5 5.2 0.6 143 chr2L 1620271 3` UTR CR44603 - chr2L 1620342 3` UTR CR44603 - chr2L 1620414 3` UTR CR44603 - chr2L_4_1620001 chr2L_1620001 RAL-774_125 55 chr2L 1634735 1634756 chr2L 1634864 1634898 5 138 5.0 3.0 4.0 1.0 163 chr2L 1634735 intergenic not near genes chr2L 1634816 intergenic not near genes chr2L 1634898 intergenic not near genes chr2L_5_1630001 chr2L_1630001 RAL-774_125 56 chr2L 1661977 1662033 chr2L 1662109 1662176 6 138 4.5 3.0 3.8 1.2 199 chr2L 1661977 intron chinmo + chr2L 1662076 intron chinmo + chr2L 1662176 intron chinmo + chr2L_6_1660001 chr2L_1660001 RAL-774_125 57 chr2L 1678911 1678999 chr2L 1686444 1686508 blood 9 7527 0.0 5.5 2.8 2.4 7597 chr2L 1678911 intron chinmo + chr2L 1682710 intron chinmo + chr2L 1686508 intron chinmo + chr2L_9_1680001 chr2L_1680001 RAL-774_125 58 chr2L 1711316 1711380 chr2L 1711685 1711713 mdg3 8 359 2.0 3.0 2.5 2.3 397 chr2L 1711316 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711514 3` UTR frtz - chr2L 1711713 3` UTR frtz - chr2L_8_1710001 chr2L_1710001 RAL-774_125 59 chr2L 1724785 1724824 chr2L 1724911 1724956 9 130 2.5 6.0 4.2 1.7 171 chr2L 1724785 3` UTR Eno - chr2L 1724870 3` UTR Eno - chr2L 1724956 3` UTR Eno - chr2L_9_1720001 chr2L_1720001 RAL-774_125 60 chr2L 1883375 1883445 chr2L 1884006 1884070 10 625 0.0 2.5 1.2 4.5 695 chr2L 1883375 intron CG15358 - chr2L 1883722 intron CG15358 - chr2L 1884070 intergenic CG15358 - chr2L_10_1880001 chr2L_1880001 RAL-774_125 61 chr2L 1993160 1993219 chr2L 1993283 1993355 10 126 2.0 3.0 2.5 2.9 195 chr2L 1993160 intergenic not near genes chr2L 1993258 intergenic not near genes chr2L 1993355 intergenic not near genes chr2L_10_1990001 chr2L_1990001 RAL-774_125 62 chr2L 2007833 2007856 chr2L 2007991 2008003 5 154 3.5 8.0 5.8 0.7 170 chr2L 2007833 intergenic CR45712 + chr2L 2007918 intergenic CR45712 +,Nplp4 + chr2L 2008003 intergenic CR45712 +,Nplp4 + chr2L_5_2005001 chr2L_2005001 RAL-774_125 63 chr2L 2047764 2047821 chr2L 2048009 2048060 6 241 4.5 0.0 2.2 1.9 296 chr2L 2047764 3` UTR Kebab + chr2L 2047912 3` UTR Kebab + chr2L 2048060 intergenic Kebab + chr2L_6_2045001 chr2L_2045001 RAL-774_125 64 chr2L 2075945 2076005 chr2L 2076159 2076227 6 220 5.0 4.5 4.8 1.0 282 chr2L 2075945 intron dpr3 - chr2L 2076086 intron dpr3 - chr2L 2076227 intron dpr3 - chr2L_6_2075001 chr2L_2075001 RAL-774_125 65 chr2L 2100378 2100403 chr2L 2109549 2109564 roo 5 9183 3.5 4.5 4.0 1.0 9186 chr2L 2100378 intron dpr3 - chr2L 2104971 intron dpr3 - chr2L 2109564 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-774_125 66 chr2L 2112117 2112140 chr2L 2119814 2119818 opus 4 7690 1.0 8.5 4.8 0.7 7701 chr2L 2112117 intergenic not near genes chr2L 2115968 intergenic not near genes chr2L 2119818 intergenic not near genes chr2L_4_2115001 chr2L_2115001 RAL-774_125 67 chr2L 2125543 2125554 chr2L 2125835 2125846 4 292 9.0 28.5 18.8 0.2 303 chr2L 2125543 intergenic not near genes chr2L 2125694 intergenic not near genes chr2L 2125846 intergenic not near genes chr2L_4_2125001 chr2L_2125001 RAL-774_125 68 chr2L 2125540 2125556 chr2L 2125848 2125863 5 299 9.5 27.5 18.5 0.3 323 chr2L 2125540 intergenic not near genes chr2L 2125702 intergenic not near genes chr2L 2125863 intergenic not near genes chr2L_5_2125001 chr2L_2125001 RAL-774_125 69 chr2L 2160569 2160612 chr2L 2160709 2160752 9 140 4.0 2.5 3.2 2.1 183 chr2L 2160569 5` UTR aop - chr2L 2160660 intron aop - chr2L 2160752 intron aop - chr2L_9_2160001 chr2L_2160001 RAL-774_125 70 chr2L 2186934 2186963 chr2L 2187057 2187076 5 124 4.0 2.5 3.2 1.2 142 chr2L 2186934 intergenic CR44066 - chr2L 2187005 3` UTR CR44066 - chr2L 2187076 3` UTR CR44066 - chr2L_5_2185001 chr2L_2185001 RAL-774_125 71 chr2L 2294027 2294070 chr2L 2299247 2299284 copia 7 5236 1.5 3.0 2.2 2.2 5257 chr2L 2294027 intergenic not near genes chr2L 2296656 intergenic not near genes chr2L 2299284 intergenic not near genes chr2L_7_2295001 chr2L_2295001 RAL-774_125 72 chr2L 2317073 2317111 chr2L 2317294 2317332 4 220 17.0 21.0 19.0 0.2 259 chr2L 2317073 intron,intron CG9967 -,eys + chr2L 2317202 intron,intron CG9967 -,eys + chr2L 2317332 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-774_125 73 chr2L 2372320 2372370 chr2L 2372456 2372506 11 135 5.0 5.5 5.2 1.8 186 chr2L 2372320 intergenic CG3609 - chr2L 2372413 intergenic CG3609 - chr2L 2372506 3` UTR CG3609 - chr2L_11_2370001 chr2L_2370001 RAL-774_125 74 chr2L 2497604 2497615 chr2L 2497730 2497731 4 122 6.0 7.5 6.8 0.5 127 chr2L 2497604 3` UTR oaf + chr2L 2497668 3` UTR oaf + chr2L 2497731 3` UTR oaf + chr2L_4_2495001 chr2L_2495001 RAL-774_125 75 chr2L 2498152 2498208 chr2L 2498270 2498333 4 125 2.5 4.0 3.2 1.0 181 chr2L 2498152 3` UTR oaf + chr2L 2498242 3` UTR oaf + chr2L 2498333 3` UTR oaf + chr2L_4_2495001 chr2L_2495001 RAL-774_125 76 chr2L 2499741 2499798 chr2L 2500367 2500408 6 616 2.5 1.0 1.8 2.1 667 chr2L 2499741 intergenic not near genes chr2L 2500074 intergenic not near genes chr2L 2500408 intergenic not near genes chr2L_6_2500001 chr2L_2500001 RAL-774_125 77 chr2L 2547976 2548026 chr2L 2549134 2549192 11 1162 1.5 28.0 14.8 0.7 1216 chr2L 2547976 intergenic not near genes chr2L 2548584 intergenic not near genes chr2L 2549192 intergenic not near genes chr2L_11_2545001 chr2L_2545001 RAL-774_125 78 chr2L 2565516 2565547 chr2L 2571638 2571670 297 7 6121 3.5 5.5 4.5 1.3 6154 chr2L 2565516 exon Cyp309a2 - chr2L 2568593 intron Cyp309a2 - chr2L 2571670 exon Cyp309a2 - chr2L_7_2565001 chr2L_2565001 RAL-774_125 79 chr2L 2587812 2587843 chr2L 2587897 2587963 5 116 5.0 3.0 4.0 1.0 151 chr2L 2587812 intergenic not near genes chr2L 2587888 intergenic not near genes chr2L 2587963 intergenic not near genes chr2L_5_2585001 chr2L_2585001 RAL-774_125 80 chr2L 2596995 2597054 chr2L 2597150 2597209 6 154 4.0 4.5 4.2 1.2 214 chr2L 2596995 intergenic not near genes chr2L 2597102 intergenic not near genes chr2L 2597209 intergenic not near genes chr2L_6_2595001 chr2L_2595001 RAL-774_125 81 chr2L 2661189 2661233 chr2L 2663036 2663066 I-element 12 1856 3.5 4.5 4.0 2.4 1877 chr2L 2661189 intergenic not near genes chr2L 2662128 intergenic not near genes chr2L 2663066 intergenic not near genes chr2L_12_2660001 chr2L_2660001 RAL-774_125 82 chr2L 2667586 2667656 chr2L 2667715 2667780 14 119 5.5 6.0 5.8 2.1 194 chr2L 2667586 intergenic not near genes chr2L 2667683 intergenic not near genes chr2L 2667780 intergenic not near genes chr2L_14_2665001 chr2L_2665001 RAL-774_125 83 chr2L 2669241 2669252 chr2L 2669413 2669424 6 171 8.0 1.0 4.5 1.1 183 chr2L 2669241 intergenic not near genes chr2L 2669332 intergenic Gr23a + chr2L 2669424 intergenic Gr23a + chr2L_6_2665001 chr2L_2665001 RAL-774_125 84 chr2L 2715664 2715686 chr2L 2715774 2715811 6 123 6.0 4.5 5.2 1.0 147 chr2L 2715664 intron CG31690 + chr2L 2715738 intron CG31690 + chr2L 2715811 intron CG31690 + chr2L_6_2715001 chr2L_2715001 RAL-774_125 85 chr2L 2725124 2725166 chr2L 2725254 2725296 11 128 4.5 6.0 5.2 1.8 172 chr2L 2725124 intergenic not near genes chr2L 2725210 intergenic CG31689 + chr2L 2725296 intergenic CG31689 + chr2L_11_2725001 chr2L_2725001 RAL-774_125 86 chr2L 2772580 2772619 chr2L 2779212 2779251 297 5 6631 1.5 7.0 4.2 1.0 6671 chr2L 2772580 3` UTR Syt1 - chr2L 2775916 intron Syt1 - chr2L 2779251 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RAL-774_125 87 chr2L 2782904 2782932 chr2L 2783028 2783050 7 124 3.0 4.5 3.8 1.5 146 chr2L 2782904 intron Syt1 - chr2L 2782977 intron Syt1 - chr2L 2783050 3` UTR Syt1 - chr2L_7_2780001 chr2L_2780001 RAL-774_125 88 chr2L 2793908 2793926 chr2L 2794032 2794056 6 126 5.0 5.0 5.0 1.0 148 chr2L 2793908 5` UTR Syt1 - chr2L 2793982 intron Syt1 - chr2L 2794056 intron Syt1 - chr2L_6_2790001 chr2L_2790001 RAL-774_125 89 chr2L 2800563 2800578 chr2L 2800690 2800711 6 131 6.0 0.5 3.2 1.4 148 chr2L 2800563 intergenic not near genes chr2L 2800637 intergenic not near genes chr2L 2800711 intergenic not near genes chr2L_6_2800001 chr2L_2800001 RAL-774_125 90 chr2L 2826491 2826576 chr2L 2826633 2826722 9 140 1.5 0.0 0.8 5.0 231 chr2L 2826491 intron Duox - chr2L 2826606 intron Duox - chr2L 2826722 intron Duox - chr2L_9_2825001 chr2L_2825001 RAL-774_125 91 chr2L 2830376 2830414 chr2L 2830551 2830594 6 172 2.5 2.5 2.5 1.7 218 chr2L 2830376 intergenic Duox - chr2L 2830485 intergenic Duox - chr2L 2830594 intergenic Duox - chr2L_6_2830001 chr2L_2830001 RAL-774_125 92 chr2L 2895645 2895712 chr2L 2895781 2895836 16 128 7.5 3.0 5.2 2.6 191 chr2L 2895645 intron lilli + chr2L 2895740 intron lilli + chr2L 2895836 intron lilli + chr2L_16_2895001 chr2L_2895001 RAL-774_125 93 chr2L 2937391 2937445 chr2L 2937504 2937572 11 125 4.5 3.5 4.0 2.2 181 chr2L 2937391 intron lilli + chr2L 2937482 intron lilli + chr2L 2937572 intron lilli + chr2L_11_2935001 chr2L_2935001 RAL-774_125 94 chr2L 3072780 3072821 chr2L 3072916 3072948 7 134 5.5 6.5 6.0 1.0 168 chr2L 3072780 intron toc - chr2L 3072864 intron toc - chr2L 3072948 intron toc - chr2L_7_3070001 chr2L_3070001 RAL-774_125 95 chr2L 3072987 3073056 chr2L 3078240 3078309 copia 20 5252 5.5 2.0 3.8 4.2 5322 chr2L 3072987 intron toc - chr2L 3075648 intron toc - chr2L 3078309 intron toc - chr2L_20_3075001 chr2L_3075001 RAL-774_125 96 chr2L 3103673 3103751 chr2L 3103806 3103852 6 124 0.5 2.5 1.5 2.4 179 chr2L 3103673 intron toc - chr2L 3103762 intron toc - chr2L 3103852 intron toc - chr2L_6_3100001 chr2L_3100001 RAL-774_125 97 chr2L 3108826 3108893 chr2L 3108947 3109020 19 122 5.0 5.5 5.2 3.1 194 chr2L 3108826 exon toc - chr2L 3108923 intron toc - chr2L 3109020 intron toc - chr2L_19_3105001 chr2L_3105001 RAL-774_125 98 chr2L 3134247 3134289 chr2L 3134373 3134408 6 124 4.5 8.5 6.5 0.8 161 chr2L 3134247 intron toc - chr2L 3134328 intron toc - chr2L 3134408 intron toc - chr2L_6_3130001 chr2L_3130001 RAL-774_125 99 chr2L 3134913 3134957 chr2L 3135040 3135084 12 124 4.5 6.5 5.5 1.8 171 chr2L 3134913 intron toc - chr2L 3134998 intron toc - chr2L 3135084 intron toc - chr2L_12_3130001 chr2L_3130001 RAL-774_125 100 chr2L 3186436 3186493 chr2L 3186556 3186629 10 127 4.5 5.0 4.8 1.7 193 chr2L 3186436 intron CG34393 - chr2L 3186532 intron CG34393 - chr2L 3186629 intron CG34393 - chr2L_10_3185001 chr2L_3185001 RAL-774_125 101 chr2L 3192172 3192232 chr2L 3192326 3192393 13 153 6.0 4.0 5.0 2.2 221 chr2L 3192172 exon CG34393 - chr2L 3192282 intron CG34393 - chr2L 3192393 intron CG34393 - chr2L_13_3190001 chr2L_3190001 RAL-774_125 102 chr2L 3232018 3232055 chr2L 3232132 3232189 5 128 11.0 1.5 6.2 0.7 171 chr2L 3232018 intergenic not near genes chr2L 3232104 intergenic not near genes chr2L 3232189 intergenic not near genes chr2L_5_3230001 chr2L_3230001 RAL-774_125 103 chr2L 3251467 3251519 chr2L 3259082 3259134 springer 7 7611 1.0 5.5 3.2 1.7 7667 chr2L 3251467 intergenic not near genes chr2L 3255300 intergenic not near genes chr2L 3259134 intergenic not near genes chr2L_7_3255001 chr2L_3255001 RAL-774_125 104 chr2L 3291215 3291265 chr2L 3291317 3291355 7 112 4.0 4.0 4.0 1.4 140 chr2L 3291215 intergenic CG9664 - chr2L 3291285 3` UTR CG9664 - chr2L 3291355 3` UTR CG9664 - chr2L_7_3290001 chr2L_3290001 RAL-774_125 105 chr2L 3294325 3294376 chr2L 3294472 3294517 12 145 4.5 5.5 5.0 2.0 192 chr2L 3294325 5` UTR CG9664 - chr2L 3294421 5` UTR CG9664 - chr2L 3294517 5` UTR CG9664 - chr2L_12_3290001 chr2L_3290001 RAL-774_125 106 chr2L 3386197 3386269 chr2L 3386349 3386406 13 150 3.5 4.5 4.0 2.6 209 chr2L 3386197 intergenic not near genes chr2L 3386302 intergenic not near genes chr2L 3386406 intergenic CR45301 - chr2L_13_3385001 chr2L_3385001 RAL-774_125 107 chr2L 3388572 3388620 chr2L 3388858 3388911 pogo 9 289 2.5 5.0 3.8 1.9 339 chr2L 3388572 intergenic CG42460 - chr2L 3388742 intergenic CG42460 - chr2L 3388911 intergenic CG42460 -,CR44791 + chr2L_9_3385001 chr2L_3385001 RAL-774_125 108 chr2L 3508310 3508366 chr2L 3508438 3508494 8 127 5.0 6.0 5.5 1.2 184 chr2L 3508310 intergenic tim -,CR45299 + chr2L 3508402 intergenic CR45299 +,tim - chr2L 3508494 intergenic CR45299 +,tim - chr2L_8_3505001 chr2L_3505001 RAL-774_125 109 chr2L 3569946 3569959 chr2L 3570103 3570116 6 155 4.5 2.5 3.5 1.3 170 chr2L 3569946 intergenic not near genes chr2L 3570031 intergenic not near genes chr2L 3570116 intergenic not near genes chr2L_6_3570001 chr2L_3570001 RAL-774_125 110 chr2L 3582834 3582850 chr2L 3582961 3582977 6 127 1.5 8.0 4.8 1.0 143 chr2L 3582834 intergenic not near genes chr2L 3582906 intergenic not near genes chr2L 3582977 intergenic not near genes chr2L_6_3580001 chr2L_3580001 RAL-774_125 111 chr2L 3649736 3649801 chr2L 3654988 3655053 copia 8 5254 2.0 2.0 2.0 2.7 5317 chr2L 3649736 intron for - chr2L 3652394 intron for - chr2L 3655053 intron for - chr2L_8_3650001 chr2L_3650001 RAL-774_125 112 chr2L 3701319 3701347 chr2L 3702696 3702712 6 1373 7.0 8.5 7.8 0.7 1393 chr2L 3701319 exon CG42467 + chr2L 3702016 exon CG43145 + chr2L 3702712 5` UTR CR44311 + chr2L_6_3700001 chr2L_3700001 RAL-774_125 113 chr2L 3701349 3701385 chr2L 3702691 3702762 10 1373 1.0 8.5 4.8 1.7 1413 chr2L 3701349 exon CG42467 + chr2L 3702056 exon CG43145 + chr2L 3702762 5` UTR CR44311 + chr2L_10_3700001 chr2L_3700001 RAL-774_125 114 chr2L 3787613 3787676 chr2L 3787777 3787840 12 164 3.0 5.5 4.2 2.3 227 chr2L 3787613 intron CG3921 + chr2L 3787726 intron CG3921 + chr2L 3787840 intron CG3921 + chr2L_12_3785001 chr2L_3785001 RAL-774_125 115 chr2L 3788362 3788390 chr2L 3788506 3788511 5 138 5.0 4.0 4.5 0.9 149 chr2L 3788362 intron CG3921 + chr2L 3788436 intron CG3921 + chr2L 3788511 intron CG3921 + chr2L_5_3785001 chr2L_3785001 RAL-774_125 116 chr2L 3898798 3898804 chr2L 3898932 3898938 4 134 5.0 2.5 3.8 0.8 140 chr2L 3898798 intron capu - chr2L 3898868 intron capu - chr2L 3898938 intron capu - chr2L_4_3895001 chr2L_3895001 RAL-774_125 117 chr2L 3905996 3906056 chr2L 3906192 3906252 10 185 5.0 2.5 3.8 2.1 256 chr2L 3905996 intron fred - chr2L 3906124 intron fred - chr2L 3906252 intron fred - chr2L_10_3905001 chr2L_3905001 RAL-774_125 118 chr2L 3907611 3907672 chr2L 3907736 3907788 11 120 2.5 1.5 2.0 3.7 177 chr2L 3907611 intron fred - chr2L 3907700 intron fred - chr2L 3907788 intron fred - chr2L_11_3905001 chr2L_3905001 RAL-774_125 119 chr2L 3936622 3936653 chr2L 3936743 3936772 8 124 3.0 7.0 5.0 1.3 150 chr2L 3936622 intron fred - chr2L 3936697 intron fred - chr2L 3936772 intron fred - chr2L_8_3935001 chr2L_3935001 RAL-774_125 120 chr2L 4017274 4017326 chr2L 4017409 4017461 8 132 6.5 8.5 7.5 0.9 187 chr2L 4017274 intergenic not near genes chr2L 4017368 intergenic not near genes chr2L 4017461 intergenic not near genes chr2L_8_4015001 chr2L_4015001 RAL-774_125 121 chr2L 4037756 4037802 chr2L 4037893 4037936 5 136 5.0 5.0 5.0 0.8 180 chr2L 4037756 intron ed + chr2L 4037846 intron ed + chr2L 4037936 intron ed + chr2L_5_4035001 chr2L_4035001 RAL-774_125 122 chr2L 4066021 4066033 chr2L 4068872 4068903 Juan 6 2864 5.5 6.5 6.0 0.9 2882 chr2L 4066021 intron ed + chr2L 4067462 intron ed + chr2L 4068903 intron ed + chr2L_6_4065001 chr2L_4065001 RAL-774_125 123 chr2L 4150575 4150657 chr2L 4150705 4150752 10 115 8.0 8.5 8.2 1.1 177 chr2L 4150575 exon CG2955 + chr2L 4150664 exon CG2955 + chr2L 4150752 exon CG2955 + chr2L_10_4150001 chr2L_4150001 RAL-774_125 124 chr2L 4159425 4159478 chr2L 4159560 4159613 8 133 5.0 5.5 5.2 1.3 188 chr2L 4159425 intergenic not near genes chr2L 4159519 intergenic not near genes chr2L 4159613 intergenic not near genes chr2L_8_4155001 chr2L_4155001 RAL-774_125 125 chr2L 4184433 4184499 chr2L 4184802 4184868 9 365 4.0 7.5 5.8 1.3 435 chr2L 4184433 intergenic not near genes chr2L 4184650 intergenic not near genes chr2L 4184868 intergenic not near genes chr2L_9_4180001 chr2L_4180001 RAL-774_125 126 chr2L 4196566 4196615 chr2L 4196697 4196735 17 132 10.5 12.0 11.2 1.4 169 chr2L 4196566 5` UTR CG3714 - chr2L 4196650 5` UTR CG3714 - chr2L 4196735 5` UTR CG3714 - chr2L_17_4195001 chr2L_4195001 RAL-774_125 127 chr2L 4265457 4265499 chr2L 4265582 4265635 7 133 3.5 5.0 4.2 1.3 178 chr2L 4265457 intergenic not near genes chr2L 4265546 intergenic not near genes chr2L 4265635 intergenic not near genes chr2L_7_4265001 chr2L_4265001 RAL-774_125 128 chr2L 4298864 4298895 chr2L 4298983 4299029 4 123 6.0 6.5 6.2 0.6 165 chr2L 4298864 intron tutl + chr2L 4298946 intron tutl + chr2L 4299029 intron tutl + chr2L_4_4295001 chr2L_4295001 RAL-774_125 129 chr2L 4317898 4317906 chr2L 4317986 4318028 4 104 5.5 11.0 8.2 0.4 130 chr2L 4317898 intron tutl + chr2L 4317963 intron tutl + chr2L 4318028 intron tutl + chr2L_4_4315001 chr2L_4315001 RAL-774_125 130 chr2L 4345452 4345518 chr2L 4345573 4345635 10 124 2.0 4.5 3.2 2.4 183 chr2L 4345452 3` UTR Atet + chr2L 4345544 3` UTR Atet + chr2L 4345635 3` UTR Atet + chr2L_10_4345001 chr2L_4345001 RAL-774_125 131 chr2L 4437176 4437240 chr2L 4437300 4437364 15 126 2.5 2.5 2.5 4.3 188 chr2L 4437176 intron CG15431 - chr2L 4437270 intron CG15431 - chr2L 4437364 intron CG15431 - chr2L_15_4435001 chr2L_4435001 RAL-774_125 132 chr2L 4552003 4552050 chr2L 4552141 4552188 14 137 3.0 8.0 5.5 2.2 185 chr2L 4552003 intron dp - chr2L 4552096 intron dp - chr2L 4552188 intron dp - chr2L_14_4550001 chr2L_4550001 RAL-774_125 133 chr2L 4601662 4601717 chr2L 4609153 4609208 mdg1 14 7488 5.5 1.5 3.5 3.1 7546 chr2L 4601662 intron dp - chr2L 4605435 intron dp - chr2L 4609208 intron dp - chr2L_14_4605001 chr2L_4605001 RAL-774_125 134 chr2L 4609558 4609610 chr2L 4609694 4609746 12 134 8.5 6.5 7.5 1.4 188 chr2L 4609558 intron dp - chr2L 4609652 intron dp - chr2L 4609746 intron dp - chr2L_12_4605001 chr2L_4605001 RAL-774_125 135 chr2L 4693358 4693412 chr2L 4693575 4693629 8 217 4.0 2.5 3.2 1.9 271 chr2L 4693358 intergenic not near genes chr2L 4693494 intergenic not near genes chr2L 4693629 intergenic not near genes chr2L_8_4690001 chr2L_4690001 RAL-774_125 136 chr2L 4708716 4708756 chr2L 4708812 4708881 11 103 4.5 6.5 5.5 1.7 165 chr2L 4708716 intron CG34351 + chr2L 4708798 intron CG34351 + chr2L 4708881 intron CG34351 + chr2L_11_4705001 chr2L_4705001 RAL-774_125 137 chr2L 4819452 4819516 chr2L 4819619 4819681 9 170 1.5 5.5 3.5 2.0 229 chr2L 4819452 intergenic not near genes chr2L 4819566 intergenic not near genes chr2L 4819681 intergenic not near genes chr2L_9_4815001 chr2L_4815001 RAL-774_125 138 chr2L 4841026 4841102 chr2L 4841152 4841223 15 118 8.0 8.5 8.2 1.6 197 chr2L 4841026 intron CG12194 + chr2L 4841124 intron CG12194 + chr2L 4841223 3` UTR CG12194 + chr2L_15_4840001 chr2L_4840001 RAL-774_125 139 chr2L 4918121 4918182 chr2L 4923244 4923343 jockey 7 5149 2.5 0.0 1.2 3.2 5222 chr2L 4918121 intron hoe1 - chr2L 4920732 intron hoe1 - chr2L 4923343 intron hoe1 - chr2L_7_4920001 chr2L_4920001 RAL-774_125 140 chr2L 4953468 4953507 chr2L 4953759 4953793 pogo 8 289 5.5 2.5 4.0 1.6 325 chr2L 4953468 intergenic Jon25Bii - chr2L 4953630 intergenic Jon25Bii - chr2L 4953793 intergenic Jon25Bi - chr2L_8_4950001 chr2L_4950001 RAL-774_125 141 chr2L 5025083 5025144 chr2L 5025209 5025270 11 126 4.5 4.5 4.5 2.0 187 chr2L 5025083 intron vkg - chr2L 5025176 intron vkg - chr2L 5025270 intron vkg - chr2L_11_5025001 chr2L_5025001 RAL-774_125 142 chr2L 5092365 5092437 chr2L 5092502 5092574 12 136 1.0 5.0 3.0 3.0 209 chr2L 5092365 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092574 intron pgant5 - chr2L_12_5090001 chr2L_5090001 RAL-774_125 143 chr2L 5120951 5120990 chr2L 5121089 5121134 11 142 6.5 3.5 5.0 1.8 183 chr2L 5120951 intron Msp300 + chr2L 5121042 intron Msp300 + chr2L 5121134 intron Msp300 + chr2L_11_5120001 chr2L_5120001 RAL-774_125 144 chr2L 5147677 5147755 chr2L 5147959 5148024 25 277 2.5 4.0 3.2 6.0 347 chr2L 5147677 intron Msp300 + chr2L 5147850 intron Msp300 + chr2L 5148024 intron Msp300 + chr2L_25_5145001 chr2L_5145001 RAL-774_125 145 chr2L 5200538 5200600 chr2L 5215748 5215813 6 15222 22.0 24.0 23.0 0.2 15275 chr2L 5200538 exon Msp300 + chr2L 5208176 exon Cyp28d2 + chr2L 5215813 exon CG14034 - chr2L_6_5205001 chr2L_5205001 RAL-774_125 146 chr2L 5265715 5265791 chr2L 5265908 5265984 9 191 2.5 4.5 3.5 2.0 269 chr2L 5265715 intron,exon tkv -,Cyp4ac1 + chr2L 5265850 intron,3` UTR tkv -,Cyp4ac1 + chr2L 5265984 intron tkv - chr2L_9_5265001 chr2L_5265001 RAL-774_125 147 chr2L 5269956 5270019 chr2L 5270072 5270136 12 121 3.5 4.5 4.0 2.4 180 chr2L 5269956 intron,exon tkv -,Cyp4ac3 + chr2L 5270046 intron,exon tkv -,Cyp4ac3 + chr2L 5270136 intron,exon tkv -,Cyp4ac3 + chr2L_12_5270001 chr2L_5270001 RAL-774_125 148 chr2L 5342747 5342780 chr2L 5345177 5345210 Doc 4 2430 1.5 0.0 0.8 2.2 2463 chr2L 5342747 intergenic not near genes chr2L 5343978 intergenic not near genes chr2L 5345210 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-774_125 149 chr2L 5434848 5434906 chr2L 5434988 5435056 18 146 6.5 6.5 6.5 2.4 208 chr2L 5434848 intergenic not near genes chr2L 5434952 intergenic not near genes chr2L 5435056 intergenic not near genes chr2L_18_5430001 chr2L_5430001 RAL-774_125 150 chr2L 5475112 5475162 chr2L 5475265 5475317 7 153 3.5 5.5 4.5 1.3 205 chr2L 5475112 intergenic not near genes chr2L 5475214 intergenic not near genes chr2L 5475317 intergenic not near genes chr2L_7_5475001 chr2L_5475001 RAL-774_125 151 chr2L 5500011 5500066 chr2L 5500147 5500202 9 133 2.0 5.5 3.8 1.9 191 chr2L 5500011 intergenic not near genes chr2L 5500106 intergenic not near genes chr2L 5500202 intergenic not near genes chr2L_9_5500001 chr2L_5500001 RAL-774_125 152 chr2L 5508482 5508559 chr2L 5508609 5508685 6 126 6.0 4.5 5.2 1.0 203 chr2L 5508482 intergenic not near genes chr2L 5508584 intergenic not near genes chr2L 5508685 intergenic not near genes chr2L_6_5505001 chr2L_5505001 RAL-774_125 153 chr2L 5511288 5511346 chr2L 5511410 5511479 8 129 4.0 2.5 3.2 1.9 191 chr2L 5511288 intergenic not near genes chr2L 5511384 intergenic not near genes chr2L 5511479 intergenic not near genes chr2L_8_5510001 chr2L_5510001 RAL-774_125 154 chr2L 5563644 5563693 chr2L 5563778 5563827 11 134 3.5 6.0 4.8 1.9 183 chr2L 5563644 intergenic GluRIIB + chr2L 5563736 intergenic GluRIIB + chr2L 5563827 intergenic GluRIIB + chr2L_11_5560001 chr2L_5560001 RAL-774_125 155 chr2L 5670616 5670678 chr2L 5670773 5670845 16 164 1.0 4.0 2.5 4.6 229 chr2L 5670616 exon Hsp60C + chr2L 5670730 3` UTR Hsp60C + chr2L 5670845 intergenic Hsp60C + chr2L_16_5670001 chr2L_5670001 RAL-774_125 156 chr2L 5686410 5686440 chr2L 5686542 5686572 6 132 6.0 8.5 7.2 0.7 162 chr2L 5686410 intergenic not near genes chr2L 5686491 intergenic not near genes chr2L 5686572 intergenic not near genes chr2L_6_5685001 chr2L_5685001 RAL-774_125 157 chr2L 5695818 5695857 chr2L 5695960 5695999 6 142 4.0 3.5 3.8 1.2 181 chr2L 5695818 intergenic not near genes chr2L 5695908 intergenic not near genes chr2L 5695999 intergenic not near genes chr2L_6_5695001 chr2L_5695001 RAL-774_125 158 chr2L 5720226 5720285 chr2L 5720355 5720422 12 131 9.5 7.5 8.5 1.3 196 chr2L 5720226 intron CG11149 - chr2L 5720324 intron CG11149 - chr2L 5720422 intron CG11149 - chr2L_12_5720001 chr2L_5720001 RAL-774_125 159 chr2L 5820343 5820418 chr2L 5820549 5820604 5 199 9.5 7.0 8.2 0.5 261 chr2L 5820343 intergenic not near genes chr2L 5820474 intergenic not near genes chr2L 5820604 intergenic not near genes chr2L_5_5820001 chr2L_5820001 RAL-774_125 160 chr2L 5827672 5827729 chr2L 5836730 5836758 roo 10 9054 6.5 0.5 3.5 2.2 9086 chr2L 5827672 intron TrissinR + chr2L 5832215 intron TrissinR + chr2L 5836758 intron TrissinR + chr2L_10_5830001 chr2L_5830001 RAL-774_125 161 chr2L 5866348 5866393 chr2L 5866486 5866512 7 137 4.0 1.0 2.5 2.0 164 chr2L 5866348 intron rau - chr2L 5866430 intron rau - chr2L 5866512 intron rau - chr2L_7_5865001 chr2L_5865001 RAL-774_125 162 chr2L 5926216 5926453 chr2L 5926346 5926601 10 172 0.0 0.0 0.0 10.0 385 chr2L 5926216 intron dsf + chr2L 5926408 intron dsf + chr2L 5926601 intron dsf + chr2L_10_5925001 chr2L_5925001 RAL-774_125 163 chr2L 5941986 5942013 chr2L 5942127 5942150 6 139 6.5 6.5 6.5 0.8 164 chr2L 5941986 intergenic CR45289 + chr2L 5942068 5` UTR CR45289 + chr2L 5942150 5` UTR CR45289 + chr2L_6_5940001 chr2L_5940001 RAL-774_125 164 chr2L 5942016 5942053 chr2L 5942119 5942149 12 120 2.5 6.0 4.2 2.3 133 chr2L 5942016 5` UTR CR45289 + chr2L 5942082 5` UTR CR45289 + chr2L 5942149 5` UTR CR45289 + chr2L_12_5940001 chr2L_5940001 RAL-774_125 165 chr2L 6007045 6007059 chr2L 6007171 6007185 5 126 7.5 1.5 4.5 0.9 140 chr2L 6007045 intergenic Gal -,CG9098 - chr2L 6007115 intergenic CG9098 -,Gal - chr2L 6007185 intergenic CG9098 -,Gal - chr2L_5_6005001 chr2L_6005001 RAL-774_125 166 chr2L 6021589 6021618 chr2L 6021697 6021714 5 105 5.5 2.0 3.8 1.0 125 chr2L 6021589 exon CG13996 + chr2L 6021652 exon CG13996 + chr2L 6021714 3` UTR CG13996 + chr2L_5_6020001 chr2L_6020001 RAL-774_125 167 chr2L 6026896 6026938 chr2L 6027030 6027072 9 133 6.0 7.5 6.8 1.2 176 chr2L 6026896 intron CG9109 - chr2L 6026984 intron CG9109 - chr2L 6027072 intron CG9109 - chr2L_9_6025001 chr2L_6025001 RAL-774_125 168 chr2L 6050398 6050452 chr2L 6050546 6050606 11 152 7.0 6.0 6.5 1.5 208 chr2L 6050398 3` UTR CG12393 + chr2L 6050502 intergenic CG12393 +,CG9135 + chr2L 6050606 intergenic CG12393 +,CG9135 + chr2L_11_6050001 chr2L_6050001 RAL-774_125 169 chr2L 6133531 6133612 chr2L 6133669 6133731 13 136 3.5 3.5 3.5 2.9 200 chr2L 6133531 3` UTR CR45719 - chr2L 6133631 3` UTR CR45719 - chr2L 6133731 intergenic CR45719 - chr2L_13_6130001 chr2L_6130001 RAL-774_125 170 chr2L 6136510 6136582 chr2L 6136657 6136730 8 144 1.5 5.0 3.2 1.9 220 chr2L 6136510 intergenic not near genes chr2L 6136620 intergenic not near genes chr2L 6136730 intergenic not near genes chr2L_8_6135001 chr2L_6135001 RAL-774_125 171 chr2L 6185420 6185454 chr2L 6185530 6185551 6 114 5.5 5.5 5.5 0.9 131 chr2L 6185420 intron CG34380 + chr2L 6185486 intron CG34380 + chr2L 6185551 intron CG34380 + chr2L_6_6185001 chr2L_6185001 RAL-774_125 172 chr2L 6242931 6242982 chr2L 6243079 6243130 7 147 6.5 3.0 4.8 1.2 199 chr2L 6242931 intergenic not near genes chr2L 6243030 intergenic not near genes chr2L 6243130 intergenic not near genes chr2L_7_6240001 chr2L_6240001 RAL-774_125 173 chr2L 6253572 6253633 chr2L 6253696 6253759 11 125 4.5 2.5 3.5 2.4 187 chr2L 6253572 intron Ddr + chr2L 6253666 intron Ddr + chr2L 6253759 intron Ddr + chr2L_11_6250001 chr2L_6250001 RAL-774_125 174 chr2L 6283904 6283935 chr2L 6284054 6284096 6 158 6.5 0.0 3.2 1.4 192 chr2L 6283904 intron Ddr + chr2L 6284000 intron Ddr + chr2L 6284096 intron Ddr + chr2L_6_6280001 chr2L_6280001 RAL-774_125 175 chr2L 6315250 6315319 chr2L 6315387 6315461 11 140 5.5 4.0 4.8 1.9 211 chr2L 6315250 intron Ddr + chr2L 6315356 intron Ddr + chr2L 6315461 intron Ddr + chr2L_11_6315001 chr2L_6315001 RAL-774_125 176 chr2L 6363124 6363174 chr2L 6366094 6366149 Burdock 15 2969 4.5 3.5 4.0 3.0 3025 chr2L 6363124 intergenic not near genes chr2L 6364636 intergenic not near genes chr2L 6366149 intergenic not near genes chr2L_15_6360001 chr2L_6360001 RAL-774_125 177 chr2L 6426832 6426876 chr2L 6445119 6445183 roo 12 18302 3.5 6.0 4.8 2.1 18351 chr2L 6426832 3` UTR CG9527 - chr2L 6436008 intron CG9527 - chr2L 6445183 exon CG9527 - chr2L_12_6435001 chr2L_6435001 RAL-774_125 178 chr2L 6499919 6499991 chr2L 6500067 6500139 17 146 4.0 4.0 4.0 3.4 220 chr2L 6499919 intron CG31637 + chr2L 6500029 intron CG31637 + chr2L 6500139 intron CG31637 + chr2L_17_6500001 chr2L_6500001 RAL-774_125 179 chr2L 6544332 6544338 chr2L 6544474 6544480 4 142 10.5 4.0 7.2 0.5 148 chr2L 6544332 intron eya - chr2L 6544406 intron eya - chr2L 6544480 intron eya - chr2L_4_6540001 chr2L_6540001 RAL-774_125 180 chr2L 6544340 6544395 chr2L 6544473 6544537 9 140 5.5 4.0 4.8 1.6 197 chr2L 6544340 intron eya - chr2L 6544438 intron eya - chr2L 6544537 intron eya - chr2L_9_6540001 chr2L_6540001 RAL-774_125 181 chr2L 6590070 6590211 chr2L 6590176 6590332 11 116 2.0 2.0 2.0 3.7 262 chr2L 6590070 intron CG11319 - chr2L 6590201 intron CG11319 - chr2L 6590332 intron CG11319 - chr2L_11_6590001 chr2L_6590001 RAL-774_125 182 chr2L 6598078 6598133 chr2L 6599080 6599140 13 998 4.0 3.5 3.8 2.7 1062 chr2L 6598078 intron CG11319 - chr2L 6598609 intron CG11319 - chr2L 6599140 intron CG11319 - chr2L_13_6595001 chr2L_6595001 RAL-774_125 183 chr2L 6724485 6724549 chr2L 6724618 6724682 11 132 3.0 6.5 4.8 1.9 197 chr2L 6724485 intron Liprin-alpha + chr2L 6724584 intron Liprin-alpha + chr2L 6724682 intron Liprin-alpha + chr2L_11_6720001 chr2L_6720001 RAL-774_125 184 chr2L 6746072 6746100 chr2L 6746186 6746211 6 120 4.0 6.5 5.2 1.0 139 chr2L 6746072 intron CG11221 + chr2L 6746142 intron CG11221 + chr2L 6746211 intron CG11221 + chr2L_6_6745001 chr2L_6745001 RAL-774_125 185 chr2L 6771360 6771563 chr2L 6771487 6771719 7 141 0.0 0.0 0.0 7.0 359 chr2L 6771360 intron CG11321 - chr2L 6771540 intron CG11321 - chr2L 6771719 intron CG11321 - chr2L_7_6770001 chr2L_6770001 RAL-774_125 186 chr2L 6771946 6772015 chr2L 6772083 6772112 9 116 3.5 2.5 3.0 2.2 166 chr2L 6771946 intron CG11321 - chr2L 6772029 intron CG11321 - chr2L 6772112 intron CG11321 - chr2L_9_6770001 chr2L_6770001 RAL-774_125 187 chr2L 6799499 6799569 chr2L 6799637 6799695 9 134 4.0 3.0 3.5 2.0 196 chr2L 6799499 5` UTR CR43610 + chr2L 6799597 5` UTR CR43610 + chr2L 6799695 intergenic CR43610 +,CG17376 - chr2L_9_6795001 chr2L_6795001 RAL-774_125 188 chr2L 6818078 6818142 chr2L 6818217 6818279 4 138 1.0 5.5 3.2 1.0 201 chr2L 6818078 intergenic not near genes chr2L 6818178 intergenic not near genes chr2L 6818279 intergenic not near genes chr2L_4_6815001 chr2L_6815001 RAL-774_125 189 chr2L 6824912 6824960 chr2L 6825317 6825358 6 401 3.5 2.5 3.0 1.5 446 chr2L 6824912 intron sens-2 + chr2L 6825135 intron sens-2 + chr2L 6825358 intron sens-2 + chr2L_6_6825001 chr2L_6825001 RAL-774_125 190 chr2L 6850333 6850407 chr2L 6850466 6850540 9 132 3.0 4.5 3.8 1.9 207 chr2L 6850333 intergenic not near genes chr2L 6850436 intergenic not near genes chr2L 6850540 intergenic not near genes chr2L_9_6850001 chr2L_6850001 RAL-774_125 191 chr2L 6876746 6876798 chr2L 6882982 6883023 diver 9 6233 9.0 6.0 7.5 1.1 6277 chr2L 6876746 intron Nlg2 + chr2L 6879884 intron Nlg2 + chr2L 6883023 intron Nlg2 + chr2L_9_6875001 chr2L_6875001 RAL-774_125 192 chr2L 6887505 6887527 chr2L 6887705 6887729 6 202 3.5 6.0 4.8 1.0 224 chr2L 6887505 intron Nlg2 + chr2L 6887617 intron Nlg2 + chr2L 6887729 intron Nlg2 + chr2L_6_6885001 chr2L_6885001 RAL-774_125 193 chr2L 6891396 6891463 chr2L 6891544 6891606 14 147 4.0 6.5 5.2 2.3 210 chr2L 6891396 intron Nlg2 + chr2L 6891501 intron Nlg2 + chr2L 6891606 intron Nlg2 + chr2L_14_6890001 chr2L_6890001 RAL-774_125 194 chr2L 6972224 6972262 chr2L 6972692 6972714 5 467 0.0 5.5 2.8 1.3 490 chr2L 6972224 intergenic snRNP-U1-70K - chr2L 6972469 intergenic uif - chr2L 6972714 intergenic uif - chr2L_5_6970001 chr2L_6970001 RAL-774_125 195 chr2L 7005193 7005253 chr2L 7005339 7005399 6 145 6.0 3.0 4.5 1.1 206 chr2L 7005193 intron uif - chr2L 7005296 intron uif - chr2L 7005399 intron uif - chr2L_6_7005001 chr2L_7005001 RAL-774_125 196 chr2L 7030053 7030107 chr2L 7030184 7030232 11 127 1.0 4.5 2.8 2.9 179 chr2L 7030053 intergenic Rab30 - chr2L 7030142 intergenic Rab30 - chr2L 7030232 intergenic Rab30 - chr2L_11_7030001 chr2L_7030001 RAL-774_125 197 chr2L 7051098 7051152 chr2L 7051239 7051271 6 134 0.0 1.0 0.5 4.0 173 chr2L 7051098 intron milt + chr2L 7051184 intron milt + chr2L 7051271 intron milt + chr2L_6_7050001 chr2L_7050001 RAL-774_125 198 chr2L 7123847 7123863 chr2L 7123973 7123989 4 126 5.0 11.5 8.2 0.4 142 chr2L 7123847 intron Pvf3 - chr2L 7123918 intron Pvf3 - chr2L 7123989 intron Pvf3 - chr2L_4_7120001 chr2L_7120001 RAL-774_125 199 chr2L 7149959 7150010 chr2L 7150091 7150135 12 144 3.5 0.0 1.8 4.3 176 chr2L 7149959 intron Pvf3 - chr2L 7150047 intron Pvf3 - chr2L 7150135 intron Pvf3 - chr2L_12_7150001 chr2L_7150001 RAL-774_125 200 chr2L 7179104 7179137 chr2L 7179212 7179266 10 127 2.5 6.0 4.2 1.9 162 chr2L 7179104 intergenic not near genes chr2L 7179185 intergenic not near genes chr2L 7179266 intergenic not near genes chr2L_10_7175001 chr2L_7175001 RAL-774_125 201 chr2L 7193624 7193694 chr2L 7193753 7193832 14 129 0.0 1.5 0.8 7.8 208 chr2L 7193624 intron CG4497 - chr2L 7193728 intron CG4497 - chr2L 7193832 intron CG4497 - chr2L_14_7190001 chr2L_7190001 RAL-774_125 202 chr2L 7216800 7216822 chr2L 7216926 7216948 7 125 7.5 6.5 7.0 0.9 148 chr2L 7216800 intron CG13784 - chr2L 7216874 intron CG13784 - chr2L 7216948 intron CG13784 - chr2L_7_7215001 chr2L_7215001 RAL-774_125 203 chr2L 7217208 7217262 chr2L 7217358 7217417 10 153 3.5 4.0 3.8 2.1 209 chr2L 7217208 intron CG13784 - chr2L 7217312 intron CG13784 - chr2L 7217417 intron CG13784 - chr2L_10_7215001 chr2L_7215001 RAL-774_125 204 chr2L 7244693 7244741 chr2L 7244868 7244916 6 175 6.0 1.0 3.5 1.3 223 chr2L 7244693 intron Ndae1 - chr2L 7244804 intron Ndae1 - chr2L 7244916 intron Ndae1 - chr2L_6_7240001 chr2L_7240001 RAL-774_125 205 chr2L 7295979 7296014 chr2L 7296161 7296197 8 187 3.0 4.0 3.5 1.8 218 chr2L 7295979 intergenic not near genes chr2L 7296088 intergenic not near genes chr2L 7296197 intergenic not near genes chr2L_8_7295001 chr2L_7295001 RAL-774_125 206 chr2L 7330221 7330288 chr2L 7330350 7330417 6 128 5.0 2.0 3.5 1.3 196 chr2L 7330221 intergenic not near genes chr2L 7330319 intergenic not near genes chr2L 7330417 intergenic not near genes chr2L_6_7330001 chr2L_7330001 RAL-774_125 207 chr2L 7343297 7343353 chr2L 7350454 7350504 roo 9 7155 6.0 4.5 5.2 1.5 7207 chr2L 7343297 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350504 intron Wnt6 + chr2L_9_7345001 chr2L_7345001 RAL-774_125 208 chr2L 7437142 7437208 chr2L 7437272 7437338 7 129 1.0 2.5 1.8 2.5 196 chr2L 7437142 intergenic CG5973 + chr2L 7437240 intergenic CG5973 + chr2L 7437338 intergenic CG5973 + chr2L_7_7435001 chr2L_7435001 RAL-774_125 209 chr2L 5904539 5904541 chr2L 7466148 7466150 10 1561609 1.5 21.5 11.5 0.8 1561611 chr2L 5904539 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466150 intergenic CG6055 + chr2L_10_6685001 chr2L_6685001 RAL-774_125 210 chr2L 7489657 7489714 chr2L 7489796 7489853 8 138 7.0 7.5 7.2 1.0 196 chr2L 7489657 intron Ziz - chr2L 7489755 intron Ziz - chr2L 7489853 intron Ziz - chr2L_8_7485001 chr2L_7485001 RAL-774_125 211 chr2L 7567448 7567513 chr2L 7567564 7567640 15 122 4.0 4.0 4.0 3.0 192 chr2L 7567448 intron RapGAP1 - chr2L 7567544 intron RapGAP1 - chr2L 7567640 intron RapGAP1 - chr2L_15_7565001 chr2L_7565001 RAL-774_125 212 chr2L 7630634 7630678 chr2L 7630766 7630810 9 130 6.5 4.0 5.2 1.5 176 chr2L 7630634 intergenic not near genes chr2L 7630722 intergenic not near genes chr2L 7630810 intergenic not near genes chr2L_9_7630001 chr2L_7630001 RAL-774_125 213 chr2L 7633412 7633465 chr2L 7633547 7633614 4 144 3.0 0.0 1.5 1.6 202 chr2L 7633412 intergenic not near genes chr2L 7633513 intergenic not near genes chr2L 7633614 intergenic not near genes chr2L_4_7630001 chr2L_7630001 RAL-774_125 214 chr2L 7636221 7636227 chr2L 7636621 7636627 4 400 11.0 4.5 7.8 0.5 406 chr2L 7636221 5` UTR CR44799 + chr2L 7636424 intron CR44799 + chr2L 7636627 intergenic CR44799 +,CR44800 + chr2L_4_7635001 chr2L_7635001 RAL-774_125 215 chr2L 7636229 7636295 chr2L 7636619 7636695 18 395 4.5 4.0 4.2 3.5 466 chr2L 7636229 5` UTR CR44799 + chr2L 7636462 5` UTR CR44799 + chr2L 7636695 intergenic CR44799 +,CR44800 + chr2L_18_7635001 chr2L_7635001 RAL-774_125 216 chr2L 7640371 7640416 chr2L 7640502 7640547 8 131 4.5 4.0 4.2 1.5 176 chr2L 7640371 intergenic not near genes chr2L 7640459 intergenic not near genes chr2L 7640547 intergenic not near genes chr2L_8_7640001 chr2L_7640001 RAL-774_125 217 chr2L 7652999 7653058 chr2L 7653143 7653186 11 141 7.0 1.0 4.0 2.2 187 chr2L 7652999 intron Slob - chr2L 7653092 intron Slob - chr2L 7653186 intron Slob - chr2L_11_7650001 chr2L_7650001 RAL-774_125 218 chr2L 7775602 7775664 chr2L 7775744 7775806 5 142 5.0 9.0 7.0 0.6 204 chr2L 7775602 intergenic CG7179 - chr2L 7775704 intergenic CG7179 - chr2L 7775806 3` UTR CG7179 - chr2L_5_7775001 chr2L_7775001 RAL-774_125 219 chr2L 7789400 7789477 chr2L 7789534 7789603 13 126 1.0 0.0 0.5 8.7 203 chr2L 7789400 intron CG7149 - chr2L 7789502 intron CG7149 - chr2L 7789603 intron CG7149 - chr2L_13_7785001 chr2L_7785001 RAL-774_125 220 chr2L 7829228 7829292 chr2L 7829376 7829440 9 148 0.0 6.0 3.0 2.2 212 chr2L 7829228 intron mts + chr2L 7829334 intron mts + chr2L 7829440 intron mts + chr2L_9_7825001 chr2L_7825001 RAL-774_125 221 chr2L 7855413 7855471 chr2L 7855553 7855592 5 135 6.0 3.5 4.8 0.9 179 chr2L 7855413 5` UTR CG14535 - chr2L 7855502 intergenic CG14535 - chr2L 7855592 intergenic CG14535 - chr2L_5_7855001 chr2L_7855001 RAL-774_125 222 chr2L 7867535 7867594 chr2L 7867673 7867728 14 139 3.5 2.0 2.8 3.7 193 chr2L 7867535 intron Proc - chr2L 7867632 intron Proc - chr2L 7867728 intron Proc - chr2L_14_7865001 chr2L_7865001 RAL-774_125 223 chr2L 7887667 7887677 chr2L 7887794 7887809 5 131 1.0 11.5 6.2 0.7 142 chr2L 7887667 intergenic Spn28Da -,CG7102 - chr2L 7887738 3` UTR Spn28Da - chr2L 7887809 exon Spn28Da - chr2L_5_7885001 chr2L_7885001 RAL-774_125 224 chr2L 7958998 7959063 chr2L 7960459 7960516 pogo 5 1460 6.0 3.0 4.5 0.9 1518 chr2L 7958998 intron Snoo - chr2L 7959757 intron Snoo - chr2L 7960516 intron Snoo - chr2L_5_7955001 chr2L_7955001 RAL-774_125 225 chr2L 7977046 7977105 chr2L 7984072 7984115 297 9 7022 1.5 3.0 2.2 2.8 7069 chr2L 7977046 intron Snoo - chr2L 7980580 intron Snoo - chr2L 7984115 intron,5` UTR Snoo -,CG7231 + chr2L_9_7980001 chr2L_7980001 RAL-774_125 226 chr2L 7986881 7986905 chr2L 7987017 7987035 4 134 3.0 4.5 3.8 0.8 154 chr2L 7986881 3` UTR pes - chr2L 7986958 3` UTR pes - chr2L 7987035 3` UTR pes - chr2L_4_7985001 chr2L_7985001 RAL-774_125 227 chr2L 8002980 8003052 chr2L 8003113 8003218 9 160 1.0 0.0 0.5 6.0 238 chr2L 8002980 intron Wwox - chr2L 8003099 intron Wwox - chr2L 8003218 intron Wwox - chr2L_9_8000001 chr2L_8000001 RAL-774_125 228 chr2L 8013618 8013647 chr2L 8023603 8023627 copia 7 9982 3.5 9.0 6.2 1.0 10009 chr2L 8013618 intron Tg + chr2L 8018622 intron Tg + chr2L 8023627 intron Tg + chr2L_7_8015001 chr2L_8015001 RAL-774_125 229 chr2L 8034570 8034580 chr2L 8034711 8034731 5 146 8.0 11.0 9.5 0.5 161 chr2L 8034570 intron,intron CG7367 -,Cka + chr2L 8034650 intron,intron CG7367 -,Cka + chr2L 8034731 intron,intron CG7367 -,Cka + chr2L_5_8030001 chr2L_8030001 RAL-774_125 230 chr2L 8108864 8108933 chr2L 8109010 8109079 12 145 1.5 1.5 1.5 4.8 215 chr2L 8108864 3` UTR Bsg + chr2L 8108972 3` UTR Bsg + chr2L 8109079 3` UTR Bsg + chr2L_12_8105001 chr2L_8105001 RAL-774_125 231 chr2L 8167109 8167166 chr2L 8167250 8167302 12 140 2.5 4.0 3.2 2.9 193 chr2L 8167109 intron Piezo + chr2L 8167206 intron Piezo + chr2L 8167302 intron Piezo + chr2L_12_8165001 chr2L_8165001 RAL-774_125 232 chr2L 8231943 8232022 chr2L 8232102 8232150 6 154 0.0 5.0 2.5 1.7 207 chr2L 8231943 intron Pvr - chr2L 8232046 intron Pvr - chr2L 8232150 intron Pvr - chr2L_6_8230001 chr2L_8230001 RAL-774_125 233 chr2L 8244689 8244748 chr2L 8244858 8244920 11 164 0.5 4.0 2.2 3.4 231 chr2L 8244689 intron CG8086 - chr2L 8244804 intron CG8086 - chr2L 8244920 intron CG8086 - chr2L_11_8240001 chr2L_8240001 RAL-774_125 234 chr2L 8286258 8286284 chr2L 8286387 8286415 8 135 8.0 3.0 5.5 1.2 157 chr2L 8286258 intron Btk29A - chr2L 8286336 intron Btk29A - chr2L 8286415 intron Btk29A - chr2L_8_8285001 chr2L_8285001 RAL-774_125 235 chr2L 8336937 8336962 chr2L 8337032 8337087 4 118 0.0 6.0 3.0 1.0 150 chr2L 8336937 intergenic not near genes chr2L 8337012 intergenic not near genes chr2L 8337087 intergenic not near genes chr2L_4_8335001 chr2L_8335001 RAL-774_125 236 chr2L 8350934 8350961 chr2L 8351207 8351234 8 272 0.0 0.5 0.2 6.7 300 chr2L 8350934 3` UTR CG7778 + chr2L 8351084 3` UTR CG7778 + chr2L 8351234 intergenic CG7778 + chr2L_8_8350001 chr2L_8350001 RAL-774_125 237 chr2L 8452380 8452437 chr2L 8461601 8461658 roo 11 9220 4.5 10.0 7.2 1.3 9278 chr2L 8452380 intron fu12 - chr2L 8457019 intron fu12 - chr2L 8461658 intron fu12 - chr2L_11_8455001 chr2L_8455001 RAL-774_125 238 chr2L 8538132 8538191 chr2L 8538243 8538327 6 126 3.0 0.0 1.5 2.4 195 chr2L 8538132 intron CG17834 + chr2L 8538230 intron CG17834 + chr2L 8538327 intron CG17834 + chr2L_6_8535001 chr2L_8535001 RAL-774_125 239 chr2L 8553438 8553490 chr2L 8553621 8553661 5 187 3.5 6.0 4.8 0.9 223 chr2L 8553438 intron Sema-1a + chr2L 8553550 intron Sema-1a + chr2L 8553661 intron Sema-1a + chr2L_5_8550001 chr2L_8550001 RAL-774_125 240 chr2L 8612819 8612868 chr2L 8612946 8612995 4 126 4.0 5.5 4.8 0.7 176 chr2L 8612819 intron Sema-1a + chr2L 8612907 intron Sema-1a + chr2L 8612995 intron Sema-1a + chr2L_4_8610001 chr2L_8610001 RAL-774_125 241 chr2L 8614202 8614268 chr2L 8614330 8614379 12 122 4.5 5.0 4.8 2.1 177 chr2L 8614202 intron Sema-1a + chr2L 8614290 intron Sema-1a + chr2L 8614379 intron Sema-1a + chr2L_12_8610001 chr2L_8610001 RAL-774_125 242 chr2L 8654193 8654240 chr2L 8654335 8654372 8 140 5.0 5.5 5.2 1.3 179 chr2L 8654193 exon Sema-1a + chr2L 8654282 intron Sema-1a + chr2L 8654372 intron Sema-1a + chr2L_8_8650001 chr2L_8650001 RAL-774_125 243 chr2L 8687046 8687093 chr2L 8687200 8687247 6 154 2.5 2.5 2.5 1.7 201 chr2L 8687046 3` UTR Trs23 + chr2L 8687146 intergenic Hnf4 -,Trs23 + chr2L 8687247 3` UTR Hnf4 - chr2L_6_8685001 chr2L_8685001 RAL-774_125 244 chr2L 8719164 8719218 chr2L 8719279 8719344 14 124 5.0 4.0 4.5 2.5 180 chr2L 8719164 intron raw - chr2L 8719254 intron raw - chr2L 8719344 intron raw - chr2L_14_8715001 chr2L_8715001 RAL-774_125 245 chr2L 8723075 8723138 chr2L 8731502 8731565 Tirant 12 8425 4.0 3.0 3.5 2.7 8490 chr2L 8723075 intron raw - chr2L 8727320 intron raw - chr2L 8731565 intron raw - chr2L_12_8725001 chr2L_8725001 RAL-774_125 246 chr2L 8736218 8736242 chr2L 8736348 8736372 5 129 0.5 3.5 2.0 1.7 154 chr2L 8736218 intron raw - chr2L 8736295 intron raw - chr2L 8736372 intron raw - chr2L_5_8735001 chr2L_8735001 RAL-774_125 247 chr2L 8750710 8750777 chr2L 8750841 8750908 8 132 3.0 7.0 5.0 1.3 198 chr2L 8750710 intergenic not near genes chr2L 8750809 intergenic not near genes chr2L 8750908 intergenic not near genes chr2L_8_8750001 chr2L_8750001 RAL-774_125 248 chr2L 8772740 8772803 chr2L 8772875 8772937 7 134 2.5 0.0 1.2 3.2 197 chr2L 8772740 intergenic CG9466 -,CG9465 - chr2L 8772838 intergenic CG9466 -,CG9465 - chr2L 8772937 intergenic CG9466 - chr2L_7_8770001 chr2L_8770001 RAL-774_125 249 chr2L 8789294 8789330 chr2L 8789387 8789410 8 103 4.5 7.0 5.8 1.2 116 chr2L 8789294 intergenic not near genes chr2L 8789352 intergenic not near genes chr2L 8789410 intergenic not near genes chr2L_8_8785001 chr2L_8785001 RAL-774_125 250 chr2L 8799793 8799830 chr2L 8799929 8799973 7 144 1.0 5.5 3.2 1.7 180 chr2L 8799793 intergenic not near genes chr2L 8799883 intergenic not near genes chr2L 8799973 intergenic not near genes chr2L_7_8795001 chr2L_8795001 RAL-774_125 251 chr2L 8815830 8815894 chr2L 8815947 8816029 6 135 1.5 0.5 1.0 3.0 199 chr2L 8815830 intergenic not near genes chr2L 8815930 intergenic not near genes chr2L 8816029 intergenic not near genes chr2L_6_8815001 chr2L_8815001 RAL-774_125 252 chr2L 8820903 8820927 chr2L 8821026 8821056 6 127 4.0 5.5 4.8 1.0 153 chr2L 8820903 intergenic not near genes chr2L 8820980 intergenic not near genes chr2L 8821056 intergenic not near genes chr2L_6_8820001 chr2L_8820001 RAL-774_125 253 chr2L 8883136 8883191 chr2L 8883241 8883318 7 118 5.5 6.0 5.8 1.0 182 chr2L 8883136 intergenic not near genes chr2L 8883227 intergenic not near genes chr2L 8883318 intergenic not near genes chr2L_7_8880001 chr2L_8880001 RAL-774_125 254 chr2L 8902418 8902475 chr2L 8902610 8902672 9 193 1.5 4.0 2.8 2.4 254 chr2L 8902418 intron CG34398 + chr2L 8902545 intron CG34398 + chr2L 8902672 intron CG34398 + chr2L_9_8900001 chr2L_8900001 RAL-774_125 255 chr2L 8904443 8904485 chr2L 8904578 8904620 6 135 4.5 1.5 3.0 1.5 177 chr2L 8904443 intron CG34398 + chr2L 8904532 intron CG34398 + chr2L 8904620 intron CG34398 + chr2L_6_8900001 chr2L_8900001 RAL-774_125 256 chr2L 8987937 8988012 chr2L 8988068 8988143 16 128 4.0 2.0 3.0 4.0 206 chr2L 8987937 intron rost - chr2L 8988040 intron rost - chr2L 8988143 intron rost - chr2L_16_8985001 chr2L_8985001 RAL-774_125 257 chr2L 8997551 8997576 chr2L 8997837 8997849 5 282 16.0 3.5 9.8 0.5 298 chr2L 8997551 intergenic CG18661 +,alien - chr2L 8997700 intron CG18661 + chr2L 8997849 exon CG18661 + chr2L_5_8995001 chr2L_8995001 RAL-774_125 258 chr2L 8997276 8997315 chr2L 8997619 8997648 7 321 22.0 9.5 15.8 0.4 372 chr2L 8997276 5` UTR alien - chr2L 8997462 intergenic alien -,CG18661 + chr2L 8997648 5` UTR CG18661 + chr2L_7_8995001 chr2L_8995001 RAL-774_125 259 chr2L 9107883 9107924 chr2L 9108048 9108099 5 168 0.0 8.0 4.0 1.0 216 chr2L 9107883 intergenic not near genes chr2L 9107991 intergenic not near genes chr2L 9108099 intergenic not near genes chr2L_5_9105001 chr2L_9105001 RAL-774_125 260 chr2L 9128523 9128600 chr2L 9128671 9128748 14 145 5.5 3.0 4.2 2.7 225 chr2L 9128523 intron CG32982 + chr2L 9128636 intron CG32982 + chr2L 9128748 intron CG32982 + chr2L_14_9125001 chr2L_9125001 RAL-774_125 261 chr2L 9139013 9139026 chr2L 9139082 9139152 6 102 7.5 5.5 6.5 0.8 139 chr2L 9139013 intron CG32982 + chr2L 9139082 intron CG32982 + chr2L 9139152 intron CG32982 + chr2L_6_9135001 chr2L_9135001 RAL-774_125 262 chr2L 9158746 9158820 chr2L 9158893 9158970 8 142 3.5 0.0 1.8 2.9 224 chr2L 9158746 intron CG32982 + chr2L 9158858 intron CG32982 + chr2L 9158970 intron CG32982 + chr2L_8_9155001 chr2L_9155001 RAL-774_125 263 chr2L 9173025 9173093 chr2L 9173152 9173202 12 124 2.5 4.5 3.5 2.7 177 chr2L 9173025 intron tai + chr2L 9173114 intron tai + chr2L 9173202 intron tai + chr2L_12_9170001 chr2L_9170001 RAL-774_125 264 chr2L 9202025 9202079 chr2L 9202136 9202186 16 110 5.5 5.5 5.5 2.5 161 chr2L 9202025 intron tai + chr2L 9202106 intron tai + chr2L 9202186 intron tai + chr2L_16_9200001 chr2L_9200001 RAL-774_125 265 chr2L 9217931 9218002 chr2L 9222767 9222778 Doc 23 4833 3.0 3.5 3.2 5.5 4847 chr2L 9217931 intron tai + chr2L 9220354 intron tai + chr2L 9222778 intron tai + chr2L_23_9220001 chr2L_9220001 RAL-774_125 266 chr2L 9225807 9225878 chr2L 9225947 9226018 9 139 7.0 3.0 5.0 1.5 211 chr2L 9225807 intron tai + chr2L 9225912 intron tai + chr2L 9226018 intron tai + chr2L_9_9225001 chr2L_9225001 RAL-774_125 267 chr2L 9251102 9251167 chr2L 9251249 9251314 18 143 4.0 7.5 5.8 2.6 212 chr2L 9251102 intergenic aust -,borr - chr2L 9251208 intergenic aust -,borr - chr2L 9251314 intergenic borr -,aust - chr2L_18_9250001 chr2L_9250001 RAL-774_125 268 chr2L 9279938 9280006 chr2L 9280082 9280150 6 144 2.5 2.0 2.2 1.9 212 chr2L 9279938 intron Ggamma30A + chr2L 9280044 intron Ggamma30A + chr2L 9280150 intron Ggamma30A + chr2L_6_9280001 chr2L_9280001 RAL-774_125 269 chr2L 9283155 9283177 chr2L 9283282 9283304 6 125 7.5 4.5 6.0 0.9 149 chr2L 9283155 intron Ggamma30A + chr2L 9283230 intron Ggamma30A + chr2L 9283304 intron Ggamma30A + chr2L_6_9280001 chr2L_9280001 RAL-774_125 270 chr2L 9297333 9297391 chr2L 9297460 9297509 8 124 6.0 4.5 5.2 1.3 176 chr2L 9297333 3` UTR Ggamma30A + chr2L 9297421 3` UTR Ggamma30A + chr2L 9297509 3` UTR Ggamma30A + chr2L_8_9295001 chr2L_9295001 RAL-774_125 271 chr2L 9303470 9303539 chr2L 9303600 9303664 14 128 3.0 2.0 2.5 4.0 194 chr2L 9303470 intergenic not near genes chr2L 9303567 intergenic not near genes chr2L 9303664 intergenic not near genes chr2L_14_9300001 chr2L_9300001 RAL-774_125 272 chr2L 9305336 9305405 chr2L 9305767 9305841 11 433 0.5 4.0 2.2 3.4 505 chr2L 9305336 intergenic CR42844 - chr2L 9305588 intergenic not near genes chr2L 9305841 intergenic not near genes chr2L_11_9305001 chr2L_9305001 RAL-774_125 273 chr2L 9380198 9380248 chr2L 9380338 9380394 6 142 9.5 3.0 6.2 0.8 196 chr2L 9380198 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380394 intron Shawl - chr2L_6_9380001 chr2L_9380001 RAL-774_125 274 chr2L 9391627 9391692 chr2L 9391764 9391829 14 136 1.5 7.5 4.5 2.5 202 chr2L 9391627 intron Shawl - chr2L 9391728 intron Shawl - chr2L 9391829 intron Shawl - chr2L_14_9390001 chr2L_9390001 RAL-774_125 275 chr2L 9393483 9393526 chr2L 9396477 9396533 jockey 13 3013 3.5 5.0 4.2 2.5 3050 chr2L 9393483 intron Shawl - chr2L 9395008 intron Shawl - chr2L 9396533 intron Shawl - chr2L_13_9395001 chr2L_9395001 RAL-774_125 276 chr2L 9441286 9441351 chr2L 9441437 9441500 15 151 6.0 6.0 6.0 2.1 214 chr2L 9441286 intron numb + chr2L 9441393 intron numb + chr2L 9441500 intron numb + chr2L_15_9440001 chr2L_9440001 RAL-774_125 277 chr2L 9451008 9451068 chr2L 9451158 9451211 6 148 2.5 6.5 4.5 1.1 203 chr2L 9451008 intron numb + chr2L 9451110 intron numb + chr2L 9451211 intron numb + chr2L_6_9450001 chr2L_9450001 RAL-774_125 278 chr2L 9454929 9455001 chr2L 9455081 9455153 17 149 6.5 5.0 5.8 2.5 224 chr2L 9454929 intron numb + chr2L 9455041 intron numb + chr2L 9455153 intron numb + chr2L_17_9455001 chr2L_9455001 RAL-774_125 279 chr2L 9474741 9474805 chr2L 9474885 9474949 5 144 1.5 4.5 3.0 1.2 208 chr2L 9474741 intergenic not near genes chr2L 9474845 intergenic not near genes chr2L 9474949 intergenic not near genes chr2L_5_9470001 chr2L_9470001 RAL-774_125 280 chr2L 9490483 9490519 chr2L 9490603 9490640 7 123 8.5 2.5 5.5 1.1 157 chr2L 9490483 intergenic not near genes chr2L 9490562 intergenic not near genes chr2L 9490640 intergenic not near genes chr2L_7_9490001 chr2L_9490001 RAL-774_125 281 chr2L 9490520 9490551 chr2L 9490600 9490681 7 119 2.0 2.5 2.2 2.2 161 chr2L 9490520 intergenic not near genes chr2L 9490600 intergenic not near genes chr2L 9490681 intergenic Gdi - chr2L_7_9490001 chr2L_9490001 RAL-774_125 282 chr2L 9506269 9506299 chr2L 9506452 9506482 4 183 3.5 4.5 4.0 0.8 213 chr2L 9506269 intron CG33298 + chr2L 9506376 intron CG33298 + chr2L 9506482 intron CG33298 + chr2L_4_9505001 chr2L_9505001 RAL-774_125 283 chr2L 9619461 9619497 chr2L 9619848 9619884 9 384 5.0 8.0 6.5 1.2 423 chr2L 9619461 intron GlcAT-S + chr2L 9619672 intron GlcAT-S + chr2L 9619884 intron GlcAT-S + chr2L_9_9615001 chr2L_9615001 RAL-774_125 284 chr2L 9632573 9632634 chr2L 9632825 9632898 13 261 6.5 7.0 6.8 1.7 325 chr2L 9632573 intergenic not near genes chr2L 9632736 intergenic not near genes chr2L 9632898 intergenic not near genes chr2L_13_9630001 chr2L_9630001 RAL-774_125 285 chr2L 9716410 9716440 chr2L 9716548 9716578 12 137 9.0 4.5 6.8 1.5 168 chr2L 9716410 3` UTR Nckx30C - chr2L 9716494 3` UTR Nckx30C - chr2L 9716578 3` UTR Nckx30C - chr2L_12_9715001 chr2L_9715001 RAL-774_125 286 chr2L 9730929 9731000 chr2L 9731062 9731133 12 132 4.0 5.0 4.5 2.2 204 chr2L 9730929 intron,3` UTR Nckx30C -,CG13116 + chr2L 9731031 intron Nckx30C - chr2L 9731133 intron Nckx30C - chr2L_12_9730001 chr2L_9730001 RAL-774_125 287 chr2L 9828236 9828258 chr2L 9828341 9828388 10 120 7.5 8.5 8.0 1.1 152 chr2L 9828236 intron nAChRalpha6 - chr2L 9828312 intron nAChRalpha6 - chr2L 9828388 intron nAChRalpha6 - chr2L_10_9825001 chr2L_9825001 RAL-774_125 288 chr2L 9829528 9829601 chr2L 9829780 9829853 15 249 4.5 4.5 4.5 2.7 325 chr2L 9829528 intron nAChRalpha6 - chr2L 9829690 intron nAChRalpha6 - chr2L 9829853 intron nAChRalpha6 - chr2L_15_9825001 chr2L_9825001 RAL-774_125 289 chr2L 9881003 9881026 chr2L 9881097 9881122 4 112 4.5 2.5 3.5 0.9 119 chr2L 9881003 intron nAChRalpha6 - chr2L 9881062 intron nAChRalpha6 - chr2L 9881122 intron nAChRalpha6 - chr2L_4_9880001 chr2L_9880001 RAL-774_125 290 chr2L 9892487 9892504 chr2L 9892613 9892630 6 126 4.5 4.5 4.5 1.1 143 chr2L 9892487 intron mtDNA-helicase - chr2L 9892558 intron mtDNA-helicase - chr2L 9892630 intron mtDNA-helicase - chr2L_6_9890001 chr2L_9890001 RAL-774_125 291 chr2L 9892505 9892527 chr2L 9892605 9892652 5 121 3.0 4.0 3.5 1.1 147 chr2L 9892505 intron mtDNA-helicase - chr2L 9892578 intron mtDNA-helicase - chr2L 9892652 exon mtDNA-helicase - chr2L_5_9890001 chr2L_9890001 RAL-774_125 292 chr2L 9973685 9973753 chr2L 9980854 9980897 HMS-Beagle 13 7162 5.0 6.0 5.5 2.0 7212 chr2L 9973685 intergenic not near genes chr2L 9977291 intergenic not near genes chr2L 9980897 intergenic not near genes chr2L_13_9975001 chr2L_9975001 RAL-774_125 293 chr2L 9986329 9986377 chr2L 9986455 9986522 7 135 2.5 5.5 4.0 1.4 193 chr2L 9986329 intron bib + chr2L 9986426 intron bib + chr2L 9986522 intron bib + chr2L_7_9985001 chr2L_9985001 RAL-774_125 294 chr2L 10045373 10045432 chr2L 10045495 10045554 14 120 4.5 4.0 4.2 2.7 181 chr2L 10045373 intergenic not near genes chr2L 10045464 intergenic not near genes chr2L 10045554 intergenic not near genes chr2L_14_10045001 chr2L_10045001 RAL-774_125 295 chr2L 10051730 10051752 chr2L 10051814 10051864 8 110 1.5 2.0 1.8 2.9 134 chr2L 10051730 5` UTR CR44874 + chr2L 10051797 5` UTR CR44874 + chr2L 10051864 5` UTR CR44874 + chr2L_8_10050001 chr2L_10050001 RAL-774_125 296 chr2L 10110135 10110160 chr2L 10110247 10110284 6 121 5.0 3.0 4.0 1.2 149 chr2L 10110135 intron,intron CG44153 -,CG34109 + chr2L 10110210 intron,intron CG44153 -,CG34109 + chr2L 10110284 intron,intron CG44153 -,CG34109 + chr2L_6_10110001 chr2L_10110001 RAL-774_125 297 chr2L 10138162 10138193 chr2L 10143443 10143489 Rt1c 6 5293 1.5 5.5 3.5 1.3 5327 chr2L 10138162 intron CG44153 - chr2L 10140826 intron CG44153 - chr2L 10143489 intron CG44153 - chr2L_6_10140001 chr2L_10140001 RAL-774_125 298 chr2L 10156293 10156347 chr2L 10163808 10163867 blood 15 7514 5.5 4.5 5.0 2.5 7574 chr2L 10156293 intron,3` UTR CG44153 -,CG4839 + chr2L 10160080 intron CG44153 - chr2L 10163867 intron CG44153 - chr2L_15_10160001 chr2L_10160001 RAL-774_125 299 chr2L 10171140 10171173 chr2L 10171274 10171321 4 134 6.0 1.0 3.5 0.9 181 chr2L 10171140 intron CG44153 - chr2L 10171230 intron CG44153 - chr2L 10171321 intron CG44153 - chr2L_4_10170001 chr2L_10170001 RAL-774_125 300 chr2L 10175602 10175643 chr2L 10175739 10175779 11 136 3.0 4.5 3.8 2.3 177 chr2L 10175602 intron CG44153 - chr2L 10175690 intron CG44153 - chr2L 10175779 intron CG44153 - chr2L_11_10175001 chr2L_10175001 RAL-774_125 301 chr2L 10185464 10185518 chr2L 10185607 10185661 9 142 3.0 2.0 2.5 2.6 197 chr2L 10185464 intron Sur - chr2L 10185562 intron Sur - chr2L 10185661 exon Sur - chr2L_9_10185001 chr2L_10185001 RAL-774_125 302 chr2L 10294127 10294191 chr2L 10294253 10294321 8 128 4.5 0.5 2.5 2.3 194 chr2L 10294127 intron Hand - chr2L 10294224 intron Hand - chr2L 10294321 intron Hand - chr2L_8_10290001 chr2L_10290001 RAL-774_125 303 chr2L 10348339 10348404 chr2L 10348472 10348537 4 132 2.0 0.0 1.0 2.0 198 chr2L 10348339 intron CG34367 - chr2L 10348438 intron CG34367 - chr2L 10348537 intron CG34367 - chr2L_4_10345001 chr2L_10345001 RAL-774_125 304 chr2L 10474357 10474409 chr2L 10474472 10474540 7 118 1.5 1.0 1.2 3.2 183 chr2L 10474357 intergenic RluA-1 - chr2L 10474448 intergenic RluA-1 - chr2L 10474540 intergenic RluA-1 - chr2L_7_10470001 chr2L_10470001 RAL-774_125 305 chr2L 10480268 10480333 chr2L 10480396 10480479 10 131 4.0 0.0 2.0 3.3 211 chr2L 10480268 intron RluA-2 + chr2L 10480374 intron RluA-2 + chr2L 10480479 intron RluA-2 + chr2L_10_10480001 chr2L_10480001 RAL-774_125 306 chr2L 10490230 10490301 chr2L 10490362 10490429 11 119 5.0 6.0 5.5 1.7 199 chr2L 10490230 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490330 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490429 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_11_10490001 chr2L_10490001 RAL-774_125 307 chr2L 10495299 10495323 chr2L 10495426 10495440 6 125 4.5 11.0 7.8 0.7 141 chr2L 10495299 intron Myo31DF - chr2L 10495370 intron Myo31DF - chr2L 10495440 intron Myo31DF - chr2L_6_10495001 chr2L_10495001 RAL-774_125 308 chr2L 10540835 10540878 chr2L 10540963 10540995 8 126 2.5 6.0 4.2 1.5 160 chr2L 10540835 intergenic not near genes chr2L 10540915 intergenic not near genes chr2L 10540995 intergenic not near genes chr2L_8_10540001 chr2L_10540001 RAL-774_125 309 chr2L 10563883 10563905 chr2L 10564026 10564038 4 139 3.0 2.5 2.8 1.1 155 chr2L 10563883 intron Trim9 + chr2L 10563960 intron Trim9 + chr2L 10564038 intron Trim9 + chr2L_4_10560001 chr2L_10560001 RAL-774_125 310 chr2L 10579020 10579044 chr2L 10579160 10579184 5 140 3.0 5.5 4.2 1.0 164 chr2L 10579020 intron Trim9 + chr2L 10579102 intron Trim9 + chr2L 10579184 intron Trim9 + chr2L_5_10575001 chr2L_10575001 RAL-774_125 311 chr2L 10580753 10580819 chr2L 10580877 10580950 15 124 3.5 3.0 3.2 3.6 197 chr2L 10580753 intron Trim9 + chr2L 10580852 intron Trim9 + chr2L 10580950 intron Trim9 + chr2L_15_10580001 chr2L_10580001 RAL-774_125 312 chr2L 10589035 10589073 chr2L 10589161 10589199 5 125 0.0 4.0 2.0 1.7 164 chr2L 10589035 intron Trim9 + chr2L 10589117 intron Trim9 + chr2L 10589199 intron Trim9 + chr2L_5_10585001 chr2L_10585001 RAL-774_125 313 chr2L 10592810 10592864 chr2L 10600521 10600571 opus 7 7705 3.5 4.0 3.8 1.5 7761 chr2L 10592810 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600571 intron Trim9 + chr2L_7_10595001 chr2L_10595001 RAL-774_125 314 chr2L 10631166 10631231 chr2L 10631348 10631419 6 184 3.0 0.0 1.5 2.4 253 chr2L 10631166 intron CG7329 - chr2L 10631292 intron CG7329 - chr2L 10631419 intron CG7329 - chr2L_6_10630001 chr2L_10630001 RAL-774_125 315 chr2L 10673709 10673765 chr2L 10673830 10673897 14 129 4.5 4.0 4.2 2.7 188 chr2L 10673709 intergenic not near genes chr2L 10673803 intergenic not near genes chr2L 10673897 intergenic not near genes chr2L_14_10670001 chr2L_10670001 RAL-774_125 316 chr2L 10679008 10679038 chr2L 10679144 10679153 5 129 6.0 5.0 5.5 0.8 145 chr2L 10679008 exon CG17104 + chr2L 10679080 exon CG17104 + chr2L 10679153 exon CG17104 + chr2L_5_10675001 chr2L_10675001 RAL-774_125 317 chr2L 10685561 10685609 chr2L 10685694 10685727 13 130 4.0 6.0 5.0 2.2 166 chr2L 10685561 intergenic not near genes chr2L 10685644 intergenic CG7296 - chr2L 10685727 intergenic CG7296 - chr2L_13_10685001 chr2L_10685001 RAL-774_125 318 chr2L 10770079 10770138 chr2L 10770255 10770319 6 180 2.0 3.0 2.5 1.7 240 chr2L 10770079 intergenic CG6724 - chr2L 10770199 intergenic CG6724 - chr2L 10770319 intergenic CG6724 - chr2L_6_10770001 chr2L_10770001 RAL-774_125 319 chr2L 10785027 10785087 chr2L 10785140 10785198 12 117 5.5 4.5 5.0 2.0 171 chr2L 10785027 intron CG31869 - chr2L 10785112 intron CG31869 - chr2L 10785198 intron CG31869 - chr2L_12_10785001 chr2L_10785001 RAL-774_125 320 chr2L 10813639 10813684 chr2L 10813836 10813886 9 201 4.0 5.0 4.5 1.6 247 chr2L 10813639 intron Nos - chr2L 10813762 intron Nos - chr2L 10813886 intron Nos - chr2L_9_10810001 chr2L_10810001 RAL-774_125 321 chr2L 10862823 10862875 chr2L 10864468 10864499 Rt1c 11 1645 3.0 7.0 5.0 1.8 1676 chr2L 10862823 3` UTR CR43807 - chr2L 10863661 intron CR43807 - chr2L 10864499 3` UTR CR43807 - chr2L_11_10860001 chr2L_10860001 RAL-774_125 322 chr2L 10873389 10873403 chr2L 10873609 10873623 4 220 2.0 1.5 1.8 1.4 234 chr2L 10873389 intergenic not near genes chr2L 10873506 intergenic not near genes chr2L 10873623 intergenic not near genes chr2L_4_10870001 chr2L_10870001 RAL-774_125 323 chr2L 10914757 10914828 chr2L 10914898 10914944 15 129 1.5 3.0 2.2 4.7 187 chr2L 10914757 intergenic not near genes chr2L 10914850 intergenic not near genes chr2L 10914944 intergenic not near genes chr2L_15_10910001 chr2L_10910001 RAL-774_125 324 chr2L 10935245 10935297 chr2L 10935356 10935416 11 122 3.5 7.0 5.2 1.8 171 chr2L 10935245 intron dpr2 - chr2L 10935330 intron dpr2 - chr2L 10935416 intron dpr2 - chr2L_11_10935001 chr2L_10935001 RAL-774_125 325 chr2L 10946938 10946947 chr2L 10956190 10956202 roo 4 9259 4.5 2.0 3.2 1.0 9264 chr2L 10946938 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956202 intron dpr2 - chr2L_4_10950001 chr2L_10950001 RAL-774_125 326 chr2L 10946955 10946964 chr2L 10956188 10956229 roo 4 9249 3.0 2.0 2.5 1.1 9274 chr2L 10946955 intron dpr2 - chr2L 10951592 intron dpr2 - chr2L 10956229 intron dpr2 - chr2L_4_10950001 chr2L_10950001 RAL-774_125 327 chr2L 11142466 11142543 chr2L 11142598 11142675 13 131 1.5 3.5 2.5 3.7 209 chr2L 11142466 intron Gyc32E - chr2L 11142570 intron Gyc32E - chr2L 11142675 intron Gyc32E - chr2L_13_11140001 chr2L_11140001 RAL-774_125 328 chr2L 11145665 11145729 chr2L 11145853 11145917 10 188 2.5 3.5 3.0 2.5 252 chr2L 11145665 intron Gyc32E - chr2L 11145791 intron Gyc32E - chr2L 11145917 intron Gyc32E - chr2L_10_11145001 chr2L_11145001 RAL-774_125 329 chr2L 11202357 11202408 chr2L 11202479 11202527 6 123 6.0 5.0 5.5 0.9 170 chr2L 11202357 intron Ca-beta - chr2L 11202442 intron Ca-beta - chr2L 11202527 intron Ca-beta - chr2L_6_11200001 chr2L_11200001 RAL-774_125 330 chr2L 11214794 11214810 chr2L 11215077 11215093 6 283 9.0 0.0 4.5 1.1 299 chr2L 11214794 intron ab + chr2L 11214944 intron ab + chr2L 11215093 intron ab + chr2L_6_11210001 chr2L_11210001 RAL-774_125 331 chr2L 11315219 11315253 chr2L 11317673 11317699 G2 4 2452 6.5 2.5 4.5 0.7 2480 chr2L 11315219 intergenic not near genes chr2L 11316459 intergenic not near genes chr2L 11317699 intergenic not near genes chr2L_4_11315001 chr2L_11315001 RAL-774_125 332 chr2L 11357945 11357999 chr2L 11358068 11358127 7 127 6.0 3.5 4.8 1.2 182 chr2L 11357945 intergenic not near genes chr2L 11358036 intergenic not near genes chr2L 11358127 intergenic not near genes chr2L_7_11355001 chr2L_11355001 RAL-774_125 333 chr2L 11380591 11380635 chr2L 11380693 11380762 10 120 2.0 2.5 2.2 3.1 171 chr2L 11380591 intergenic not near genes chr2L 11380676 intergenic not near genes chr2L 11380762 intergenic not near genes chr2L_10_11380001 chr2L_11380001 RAL-774_125 334 chr2L 11401492 11401559 chr2L 11401613 11401690 12 120 4.0 4.5 4.2 2.3 198 chr2L 11401492 intergenic not near genes chr2L 11401591 intergenic not near genes chr2L 11401690 intergenic not near genes chr2L_12_11400001 chr2L_11400001 RAL-774_125 335 chr2L 11413253 11413322 chr2L 11413417 11413490 18 171 2.5 2.0 2.2 5.6 237 chr2L 11413253 intergenic not near genes chr2L 11413372 intergenic not near genes chr2L 11413490 intergenic not near genes chr2L_18_11410001 chr2L_11410001 RAL-774_125 336 chr2L 11418615 11418672 chr2L 11418734 11418801 10 126 5.0 3.0 4.0 2.0 186 chr2L 11418615 intergenic not near genes chr2L 11418708 intergenic not near genes chr2L 11418801 intergenic not near genes chr2L_10_11415001 chr2L_11415001 RAL-774_125 337 chr2L 11458900 11458964 chr2L 11459066 11459130 12 164 4.5 2.5 3.5 2.7 230 chr2L 11458900 intergenic not near genes chr2L 11459015 intergenic not near genes chr2L 11459130 intergenic not near genes chr2L_12_11455001 chr2L_11455001 RAL-774_125 338 chr2L 11491100 11491159 chr2L 11491224 11491278 8 120 2.0 4.5 3.2 1.9 178 chr2L 11491100 intergenic not near genes chr2L 11491189 intergenic not near genes chr2L 11491278 intergenic not near genes chr2L_8_11490001 chr2L_11490001 RAL-774_125 339 chr2L 11499671 11499741 chr2L 11499814 11499884 13 140 4.5 1.0 2.8 3.4 213 chr2L 11499671 intergenic not near genes chr2L 11499778 intergenic not near genes chr2L 11499884 intergenic not near genes chr2L_13_11495001 chr2L_11495001 RAL-774_125 340 chr2L 11537143 11537172 chr2L 11537275 11537299 5 130 4.0 2.5 3.2 1.2 156 chr2L 11537143 intergenic CG43438 + chr2L 11537221 intergenic CG43438 + chr2L 11537299 intergenic CG43438 + chr2L_5_11535001 chr2L_11535001 RAL-774_125 341 chr2L 11540549 11540601 chr2L 11548001 11548053 Tabor 5 7452 5.0 3.0 4.0 1.0 7504 chr2L 11540549 intergenic not near genes chr2L 11544301 intergenic not near genes chr2L 11548053 intergenic not near genes chr2L_5_11540001 chr2L_11540001 RAL-774_125 342 chr2L 11563609 11563655 chr2L 11568853 11568909 copia 13 5251 4.0 5.0 4.5 2.4 5300 chr2L 11563609 intergenic not near genes chr2L 11566259 intergenic not near genes chr2L 11568909 intergenic not near genes chr2L_13_11565001 chr2L_11565001 RAL-774_125 343 chr2L 11608894 11608958 chr2L 11609026 11609090 11 130 1.5 2.0 1.8 3.9 196 chr2L 11608894 intron kek2 + chr2L 11608992 intron kek2 + chr2L 11609090 intron kek2 + chr2L_11_11605001 chr2L_11605001 RAL-774_125 344 chr2L 11614042 11614054 chr2L 11615562 11615578 hopper2 4 1523 8.5 4.0 6.2 0.6 1536 chr2L 11614042 intron kek2 + chr2L 11614810 intron kek2 + chr2L 11615578 intron kek2 + chr2L_4_11610001 chr2L_11610001 RAL-774_125 345 chr2L 11614057 11614081 chr2L 11615551 11615598 hopper2 7 1515 4.5 4.0 4.2 1.3 1541 chr2L 11614057 intron kek2 + chr2L 11614828 intron kek2 + chr2L 11615598 intron kek2 + chr2L_7_11610001 chr2L_11610001 RAL-774_125 346 chr2L 11637952 11638006 chr2L 11638071 11638132 7 117 6.0 5.0 5.5 1.1 180 chr2L 11637952 intergenic not near genes chr2L 11638042 intergenic not near genes chr2L 11638132 intergenic not near genes chr2L_7_11635001 chr2L_11635001 RAL-774_125 347 chr2L 11659257 11659328 chr2L 11659380 11659456 13 128 3.5 3.0 3.2 3.1 199 chr2L 11659257 intergenic not near genes chr2L 11659356 intergenic not near genes chr2L 11659456 intergenic not near genes chr2L_13_11655001 chr2L_11655001 RAL-774_125 348 chr2L 11663202 11663264 chr2L 11663329 11663401 13 128 9.0 4.5 6.8 1.7 199 chr2L 11663202 intergenic CG44477 + chr2L 11663302 5` UTR CG44477 + chr2L 11663401 exon CG44477 + chr2L_13_11660001 chr2L_11660001 RAL-774_125 349 chr2L 11713470 11713532 chr2L 11720976 11721050 blood 24 7508 3.5 1.5 2.5 6.9 7580 chr2L 11713470 intergenic not near genes chr2L 11717260 intergenic not near genes chr2L 11721050 intergenic CR44143 + chr2L_24_11715001 chr2L_11715001 RAL-774_125 350 chr2L 11756285 11756321 chr2L 11756418 11756465 9 136 5.5 2.0 3.8 1.9 180 chr2L 11756285 intergenic not near genes chr2L 11756375 intergenic not near genes chr2L 11756465 intergenic not near genes chr2L_9_11755001 chr2L_11755001 RAL-774_125 351 chr2L 11866970 11867002 chr2L 11867126 11867164 11 157 6.5 6.5 6.5 1.5 194 chr2L 11866970 intron Pde1c - chr2L 11867067 intron Pde1c - chr2L 11867164 intron Pde1c - chr2L_11_11865001 chr2L_11865001 RAL-774_125 352 chr2L 11879311 11879334 chr2L 11879512 11879558 7 219 9.5 5.0 7.2 0.9 247 chr2L 11879311 intron Pde1c - chr2L 11879434 intron Pde1c - chr2L 11879558 intron Pde1c - chr2L_7_11875001 chr2L_11875001 RAL-774_125 353 chr2L 11895838 11895882 chr2L 11895963 11896010 4 127 0.0 3.5 1.8 1.4 172 chr2L 11895838 intron Pde1c - chr2L 11895924 intron Pde1c - chr2L 11896010 intron Pde1c - chr2L_4_11895001 chr2L_11895001 RAL-774_125 354 chr2L 11946977 11947021 chr2L 11947127 11947168 7 150 5.5 7.0 6.2 1.0 191 chr2L 11946977 3` UTR Cry + chr2L 11947072 3` UTR Cry + chr2L 11947168 intergenic Cry + chr2L_7_11945001 chr2L_11945001 RAL-774_125 355 chr2L 11951969 11951987 chr2L 11952106 11952125 4 138 2.5 6.5 4.5 0.7 156 chr2L 11951969 intergenic CR43314 - chr2L 11952047 intergenic CR43314 - chr2L 11952125 intergenic CR43314 - chr2L_4_11950001 chr2L_11950001 RAL-774_125 356 chr2L 12067293 12067336 chr2L 12074394 12074438 297 8 7101 1.5 5.5 3.5 1.8 7145 chr2L 12067293 intergenic not near genes chr2L 12070866 intergenic not near genes chr2L 12074438 intergenic not near genes chr2L_8_12070001 chr2L_12070001 RAL-774_125 357 chr2L 12085620 12085645 chr2L 12085745 12085772 8 122 12.5 5.0 8.8 0.8 152 chr2L 12085620 5` UTR prd - chr2L 12085696 5` UTR,5` UTR prd -,CR44592 + chr2L 12085772 5` UTR,5` UTR prd -,CR44592 + chr2L_8_12085001 chr2L_12085001 RAL-774_125 358 chr2L 12085649 12085683 chr2L 12085741 12085783 9 111 8.5 4.0 6.2 1.2 134 chr2L 12085649 5` UTR,5` UTR prd -,CR44592 + chr2L 12085716 5` UTR,5` UTR prd -,CR44592 + chr2L 12085783 5` UTR,5` UTR prd -,CR44592 + chr2L_9_12085001 chr2L_12085001 RAL-774_125 359 chr2L 12153902 12153961 chr2L 12154022 12154088 16 124 5.5 2.5 4.0 3.2 186 chr2L 12153902 exon CG31760 + chr2L 12153995 intron CG31760 + chr2L 12154088 intron CG31760 + chr2L_16_12150001 chr2L_12150001 RAL-774_125 360 chr2L 12183900 12183950 chr2L 12184183 12184238 9 283 4.0 3.0 3.5 2.0 338 chr2L 12183900 intron aret + chr2L 12184069 intron aret + chr2L 12184238 intron aret + chr2L_9_12180001 chr2L_12180001 RAL-774_125 361 chr2L 12209997 12210041 chr2L 12210135 12210163 7 130 1.5 3.5 2.5 2.0 166 chr2L 12209997 intron,3` UTR aret +,CG31759 + chr2L 12210080 intron aret + chr2L 12210163 intron aret + chr2L_7_12210001 chr2L_12210001 RAL-774_125 362 chr2L 12214071 12214094 chr2L 12214222 12214245 5 151 3.0 0.0 1.5 2.0 174 chr2L 12214071 intron aret + chr2L 12214158 intron aret + chr2L 12214245 intron aret + chr2L_5_12210001 chr2L_12210001 RAL-774_125 363 chr2L 12269367 12269400 chr2L 12269489 12269528 7 127 7.0 3.0 5.0 1.2 161 chr2L 12269367 intron aret + chr2L 12269448 intron aret + chr2L 12269528 intron aret + chr2L_7_12265001 chr2L_12265001 RAL-774_125 364 chr2L 12275149 12275172 chr2L 12275286 12275309 6 137 5.5 2.5 4.0 1.2 160 chr2L 12275149 intron aret + chr2L 12275229 intron aret + chr2L 12275309 intron aret + chr2L_6_12275001 chr2L_12275001 RAL-774_125 365 chr2L 12286894 12286950 chr2L 12287025 12287081 12 130 4.0 0.0 2.0 4.0 187 chr2L 12286894 intron aret + chr2L 12286988 intron aret + chr2L 12287081 intron aret + chr2L_12_12285001 chr2L_12285001 RAL-774_125 366 chr2L 12294214 12294273 chr2L 12294346 12294405 11 131 4.0 1.0 2.5 3.1 191 chr2L 12294214 intron aret + chr2L 12294310 intron aret + chr2L 12294405 intron aret + chr2L_11_12290001 chr2L_12290001 RAL-774_125 367 chr2L 12305368 12305426 chr2L 12305504 12305564 17 136 9.0 4.5 6.8 2.2 196 chr2L 12305368 intron aret + chr2L 12305466 intron aret + chr2L 12305564 intron aret + chr2L_17_12305001 chr2L_12305001 RAL-774_125 368 chr2L 12398631 12398684 chr2L 12398760 12398786 8 122 5.5 7.0 6.2 1.1 155 chr2L 12398631 exon Pkd2 + chr2L 12398708 exon Pkd2 + chr2L 12398786 exon Pkd2 + chr2L_8_12395001 chr2L_12395001 RAL-774_125 369 chr2L 12454091 12454132 chr2L 12454220 12454261 12 127 5.0 8.0 6.5 1.6 170 chr2L 12454091 intergenic not near genes chr2L 12454176 intergenic not near genes chr2L 12454261 intergenic not near genes chr2L_12_12450001 chr2L_12450001 RAL-774_125 370 chr2L 12474903 12474958 chr2L 12475131 12475176 10 226 5.0 0.5 2.8 2.6 273 chr2L 12474903 intron bun - chr2L 12475040 intron bun - chr2L 12475176 intron bun - chr2L_10_12475001 chr2L_12475001 RAL-774_125 371 chr2L 12487853 12487915 chr2L 12487970 12488035 18 123 6.5 12.0 9.2 1.8 182 chr2L 12487853 intron bun - chr2L 12487944 intron bun - chr2L 12488035 intron bun - chr2L_18_12485001 chr2L_12485001 RAL-774_125 372 chr2L 12523281 12523330 chr2L 12523402 12523459 8 126 3.5 5.0 4.2 1.5 178 chr2L 12523281 intron bun - chr2L 12523370 intron bun - chr2L 12523459 intron bun - chr2L_8_12520001 chr2L_12520001 RAL-774_125 373 chr2L 12529225 12529382 chr2L 12529408 12529502 11 170 2.0 2.0 2.0 3.7 277 chr2L 12529225 intron bun - chr2L 12529364 intron bun - chr2L 12529502 intron bun - chr2L_11_12525001 chr2L_12525001 RAL-774_125 374 chr2L 12558278 12558348 chr2L 12565457 12565527 HMS-Beagle 9 7171 1.5 5.5 3.5 2.0 7249 chr2L 12558278 intergenic not near genes chr2L 12561902 intergenic not near genes chr2L 12565527 intergenic not near genes chr2L_9_12560001 chr2L_12560001 RAL-774_125 375 chr2L 12570305 12570356 chr2L 12570435 12570495 10 132 5.0 0.0 2.5 2.9 190 chr2L 12570305 intergenic CR44598 - chr2L 12570400 intergenic CR44598 - chr2L 12570495 intergenic CR44598 - chr2L_10_12570001 chr2L_12570001 RAL-774_125 376 chr2L 12598179 12598195 chr2L 12598301 12598322 10 125 1.5 5.5 3.5 2.2 143 chr2L 12598179 intron nub + chr2L 12598250 intron nub + chr2L 12598322 intron nub + chr2L_10_12595001 chr2L_12595001 RAL-774_125 377 chr2L 12598989 12598996 chr2L 12599082 12599128 4 122 0.5 8.5 4.5 0.7 139 chr2L 12598989 intron nub + chr2L 12599058 intron nub + chr2L 12599128 intron nub + chr2L_4_12595001 chr2L_12595001 RAL-774_125 378 chr2L 12652991 12653061 chr2L 12653113 12653188 19 121 5.0 5.0 5.0 3.2 197 chr2L 12652991 intergenic not near genes chr2L 12653090 intergenic not near genes chr2L 12653188 intergenic not near genes chr2L_19_12650001 chr2L_12650001 RAL-774_125 379 chr2L 12728894 12728946 chr2L 12729170 12729225 pogo 11 282 4.0 3.5 3.8 2.3 331 chr2L 12728894 intron MRP + chr2L 12729060 intron MRP + chr2L 12729225 exon MRP + chr2L_11_12725001 chr2L_12725001 RAL-774_125 380 chr2L 12731016 12731081 chr2L 12735830 12735898 F-element 16 4815 5.0 4.0 4.5 2.9 4882 chr2L 12731016 intron MRP + chr2L 12733457 intron MRP + chr2L 12735898 intron MRP + chr2L_16_12730001 chr2L_12730001 RAL-774_125 381 chr2L 12739141 12739196 chr2L 12743972 12744027 Doc 11 4830 5.5 5.5 5.5 1.7 4886 chr2L 12739141 exon MRP + chr2L 12741584 intron MRP + chr2L 12744027 exon MRP + chr2L_11_12740001 chr2L_12740001 RAL-774_125 382 chr2L 12751268 12751340 chr2L 12751401 12751473 14 126 4.0 1.5 2.8 3.7 205 chr2L 12751268 intergenic not near genes chr2L 12751370 intergenic not near genes chr2L 12751473 intergenic not near genes chr2L_14_12750001 chr2L_12750001 RAL-774_125 383 chr2L 12760198 12760232 chr2L 12760344 12760378 4 146 3.5 2.0 2.8 1.1 180 chr2L 12760198 intergenic CG15483 - chr2L 12760288 intergenic CG15483 - chr2L 12760378 3` UTR CG15483 - chr2L_4_12760001 chr2L_12760001 RAL-774_125 384 chr2L 12763789 12763870 chr2L 12764049 12764131 BS 4 259 0.0 0.0 0.0 4.0 342 chr2L 12763789 intergenic not near genes chr2L 12763960 intergenic not near genes chr2L 12764131 intergenic not near genes chr2L_4_12760001 chr2L_12760001 RAL-774_125 385 chr2L 12781757 12781813 chr2L 12789250 12789306 Quasimodo 5 7493 3.0 3.5 3.2 1.2 7549 chr2L 12781757 intergenic not near genes chr2L 12785532 intergenic not near genes chr2L 12789306 intergenic not near genes chr2L_5_12785001 chr2L_12785001 RAL-774_125 386 chr2L 12791564 12791624 chr2L 12795283 12795333 F-element 15 3709 4.0 7.5 5.8 2.2 3769 chr2L 12791564 intergenic not near genes chr2L 12793448 intergenic not near genes chr2L 12795333 intergenic not near genes chr2L_15_12790001 chr2L_12790001 RAL-774_125 387 chr2L 12861660 12861680 chr2L 12863171 12863197 hobo 5 1516 6.0 3.0 4.5 0.9 1537 chr2L 12861660 intergenic not near genes chr2L 12862428 intergenic not near genes chr2L 12863197 intergenic not near genes chr2L_5_12860001 chr2L_12860001 RAL-774_125 388 chr2L 12861690 12861715 chr2L 12863167 12863227 hobo 8 1504 4.0 3.0 3.5 1.8 1537 chr2L 12861690 intergenic not near genes chr2L 12862458 intergenic not near genes chr2L 12863227 intergenic not near genes chr2L_8_12860001 chr2L_12860001 RAL-774_125 389 chr2L 12893982 12894042 chr2L 12895499 12895559 hobo 8 1509 4.5 5.5 5.0 1.3 1577 chr2L 12893982 intergenic not near genes chr2L 12894770 intergenic not near genes chr2L 12895559 intergenic not near genes chr2L_8_12890001 chr2L_12890001 RAL-774_125 390 chr2L 12905439 12905492 chr2L 12905561 12905621 6 131 2.5 3.0 2.8 1.6 182 chr2L 12905439 intergenic not near genes chr2L 12905530 intergenic not near genes chr2L 12905621 intergenic not near genes chr2L_6_12905001 chr2L_12905001 RAL-774_125 391 chr2L 12933818 12933882 chr2L 12941318 12941394 blood 13 7510 3.5 2.0 2.8 3.4 7576 chr2L 12933818 intergenic not near genes chr2L 12937606 intergenic not near genes chr2L 12941394 intergenic not near genes chr2L_13_12935001 chr2L_12935001 RAL-774_125 392 chr2L 12944889 12944964 chr2L 12945086 12945162 8 190 3.0 0.0 1.5 3.2 273 chr2L 12944889 intergenic not near genes chr2L 12945026 intergenic not near genes chr2L 12945162 intergenic not near genes chr2L_8_12945001 chr2L_12945001 RAL-774_125 393 chr2L 13048376 13048422 chr2L 13048517 13048563 5 147 18.5 19.0 18.8 0.3 187 chr2L 13048376 intron CG9932 - chr2L 13048470 intron CG9932 - chr2L 13048563 intron CG9932 - chr2L_5_13045001 chr2L_13045001 RAL-774_125 394 chr2L 13097242 13097255 chr2L 13097469 13097473 4 226 5.0 14.5 9.8 0.4 231 chr2L 13097242 5` UTR CR45447 + chr2L 13097358 intergenic CR45447 + chr2L 13097473 intergenic CR45447 + chr2L_4_13095001 chr2L_13095001 RAL-774_125 395 chr2L 13211118 13211158 chr2L 13211241 13211272 8 125 8.5 5.0 6.8 1.0 154 chr2L 13211118 exon CG15482 - chr2L 13211195 exon CG15482 - chr2L 13211272 exon CG15482 - chr2L_8_13210001 chr2L_13210001 RAL-774_125 396 chr2L 13231838 13231908 chr2L 13231999 13232069 22 159 5.0 3.0 4.0 4.4 231 chr2L 13231838 intergenic Prosalpha6T + chr2L 13231954 intergenic Prosalpha6T + chr2L 13232069 5` UTR Prosalpha6T + chr2L_22_13230001 chr2L_13230001 RAL-774_125 397 chr2L 13253847 13253852 chr2L 13253984 13253990 4 137 8.5 7.0 7.8 0.5 143 chr2L 13253847 intron CG31728 + chr2L 13253918 intron CG31728 + chr2L 13253990 intron CG31728 + chr2L_4_13250001 chr2L_13250001 RAL-774_125 398 chr2L 13253853 13253911 chr2L 13253981 13254049 7 136 4.5 6.5 5.5 1.1 196 chr2L 13253853 intron CG31728 + chr2L 13253951 intron CG31728 + chr2L 13254049 intron CG31728 + chr2L_7_13250001 chr2L_13250001 RAL-774_125 399 chr2L 13398674 13398730 chr2L 13398802 13398860 4 130 5.5 4.0 4.8 0.7 186 chr2L 13398674 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398767 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398860 3` UTR CR44600 - chr2L_4_13395001 chr2L_13395001 RAL-774_125 400 chr2L 13405613 13405664 chr2L 13410451 13410503 Doc 13 4843 3.0 2.5 2.8 3.4 4890 chr2L 13405613 exon CG7110 + chr2L 13408058 intron CG7110 + chr2L 13410503 intron CG7110 + chr2L_13_13405001 chr2L_13405001 RAL-774_125 401 chr2L 13449422 13449481 chr2L 13456908 13456967 Quasimodo 7 7486 3.5 9.5 6.5 0.9 7545 chr2L 13449422 intron,intron CG42784 +,Hsp60D - chr2L 13453194 intron CG42784 + chr2L 13456967 intron CG42784 + chr2L_7_13450001 chr2L_13450001 RAL-774_125 402 chr2L 13481413 13481463 chr2L 13482070 13482120 jockey 12 655 6.0 6.0 6.0 1.7 707 chr2L 13481413 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482120 intron CG42784 + chr2L_12_13480001 chr2L_13480001 RAL-774_125 403 chr2L 13540624 13540694 chr2L 13540752 13540823 14 125 4.5 6.5 5.5 2.2 199 chr2L 13540624 intron B4 - chr2L 13540724 intron B4 - chr2L 13540823 intron,exon B4 -,CG16852 + chr2L_14_13540001 chr2L_13540001 RAL-774_125 404 chr2L 13543940 13543969 chr2L 13544058 13544086 10 118 7.0 7.5 7.2 1.2 146 chr2L 13543940 intron B4 - chr2L 13544013 intron B4 - chr2L 13544086 intron B4 - chr2L_10_13540001 chr2L_13540001 RAL-774_125 405 chr2L 13604056 13604134 chr2L 13604256 13604335 11 198 2.0 2.5 2.2 3.4 279 chr2L 13604056 intron kuz + chr2L 13604196 intron kuz + chr2L 13604335 intron kuz + chr2L_11_13600001 chr2L_13600001 RAL-774_125 406 chr2L 13622099 13622140 chr2L 13622243 13622269 8 136 4.5 5.0 4.8 1.4 170 chr2L 13622099 intron kuz + chr2L 13622184 intron kuz + chr2L 13622269 intron kuz + chr2L_8_13620001 chr2L_13620001 RAL-774_125 407 chr2L 13640994 13641018 chr2L 13641135 13641165 6 140 4.0 7.0 5.5 0.9 171 chr2L 13640994 intron ics - chr2L 13641080 intron ics - chr2L 13641165 exon ics - chr2L_6_13640001 chr2L_13640001 RAL-774_125 408 chr2L 13692981 13693039 chr2L 13693087 13693144 14 115 7.5 6.5 7.0 1.8 163 chr2L 13692981 intron CG31814 - chr2L 13693062 intron CG31814 - chr2L 13693144 intron CG31814 - chr2L_14_13690001 chr2L_13690001 RAL-774_125 409 chr2L 13713522 13713573 chr2L 13713648 13713699 7 126 2.0 3.0 2.5 2.0 177 chr2L 13713522 intron CG31814 - chr2L 13713610 intron CG31814 - chr2L 13713699 intron CG31814 - chr2L_7_13710001 chr2L_13710001 RAL-774_125 410 chr2L 13725718 13725769 chr2L 13725855 13725904 8 137 3.0 9.0 6.0 1.1 186 chr2L 13725718 intergenic not near genes chr2L 13725811 intergenic not near genes chr2L 13725904 intergenic not near genes chr2L_8_13725001 chr2L_13725001 RAL-774_125 411 chr2L 13761781 13761823 chr2L 13762942 13762979 Doc 10 1159 3.5 9.5 6.5 1.3 1198 chr2L 13761781 intron TM9SF4 + chr2L 13762380 intron TM9SF4 + chr2L 13762979 intron TM9SF4 + chr2L_10_13760001 chr2L_13760001 RAL-774_125 412 chr2L 13842530 13842593 chr2L 13842657 13842720 12 127 7.0 5.5 6.2 1.7 190 chr2L 13842530 intron CenG1A + chr2L 13842625 intron CenG1A + chr2L 13842720 intron CenG1A + chr2L_12_13840001 chr2L_13840001 RAL-774_125 413 chr2L 13853066 13853106 chr2L 13862261 13862306 roo 8 9197 6.0 3.5 4.8 1.4 9240 chr2L 13853066 intron CenG1A + chr2L 13857686 intron CenG1A + chr2L 13862306 intron CenG1A + chr2L_8_13855001 chr2L_13855001 RAL-774_125 414 chr2L 13918774 13918841 chr2L 13918911 13918978 13 136 5.0 4.5 4.8 2.2 204 chr2L 13918774 intron Ance-3 + chr2L 13918876 intron Ance-3 + chr2L 13918978 intron Ance-3 + chr2L_13_13915001 chr2L_13915001 RAL-774_125 415 chr2L 13932696 13932744 chr2L 13932835 13932888 10 147 3.0 2.5 2.8 2.6 192 chr2L 13932696 intron,3` UTR Ance-3 +,CG16885 - chr2L 13932792 intron,3` UTR Ance-3 +,CG16885 - chr2L 13932888 intron,3` UTR Ance-3 +,CG16885 - chr2L_10_13930001 chr2L_13930001 RAL-774_125 416 chr2L 14010350 14010437 chr2L 14010480 14010559 9 122 5.5 4.0 4.8 1.6 209 chr2L 14010350 intergenic not near genes chr2L 14010454 intergenic not near genes chr2L 14010559 intergenic not near genes chr2L_9_14010001 chr2L_14010001 RAL-774_125 417 chr2L 14056762 14056833 chr2L 14056898 14056964 30 133 4.5 6.5 5.5 4.6 202 chr2L 14056762 intron nAChRalpha5 + chr2L 14056863 intron nAChRalpha5 + chr2L 14056964 intron nAChRalpha5 + chr2L_30_14055001 chr2L_14055001 RAL-774_125 418 chr2L 14126595 14126667 chr2L 14126721 14126768 11 107 3.5 3.5 3.5 2.4 173 chr2L 14126595 intergenic not near genes chr2L 14126682 intergenic not near genes chr2L 14126768 intergenic not near genes chr2L_11_14125001 chr2L_14125001 RAL-774_125 419 chr2L 14148638 14148695 chr2L 14148789 14148858 12 161 2.0 2.0 2.0 4.0 220 chr2L 14148638 intron CG17341 + chr2L 14148748 intron CG17341 + chr2L 14148858 intron CG17341 + chr2L_12_14145001 chr2L_14145001 RAL-774_125 420 chr2L 14180025 14180093 chr2L 14180146 14180219 13 124 4.5 5.5 5.0 2.2 194 chr2L 14180025 intron CG43333 - chr2L 14180122 intron CG43333 - chr2L 14180219 exon CG43333 - chr2L_13_14180001 chr2L_14180001 RAL-774_125 421 chr2L 14406179 14406217 chr2L 14406306 14406336 7 122 4.5 6.0 5.2 1.1 157 chr2L 14406179 intron elB - chr2L 14406258 intron elB - chr2L 14406336 intron elB - chr2L_7_14405001 chr2L_14405001 RAL-774_125 422 chr2L 14429392 14429446 chr2L 14429523 14429577 8 126 4.5 8.0 6.2 1.1 185 chr2L 14429392 3` UTR CR44732 - chr2L 14429484 3` UTR CR44732 - chr2L 14429577 3` UTR CR44732 - chr2L_8_14425001 chr2L_14425001 RAL-774_125 423 chr2L 14442210 14442263 chr2L 14442329 14442390 9 113 7.5 3.5 5.5 1.4 180 chr2L 14442210 intergenic not near genes chr2L 14442300 intergenic not near genes chr2L 14442390 intergenic not near genes chr2L_9_14440001 chr2L_14440001 RAL-774_125 424 chr2L 14503395 14503431 chr2L 14503524 14503560 7 129 5.5 2.5 4.0 1.4 165 chr2L 14503395 intergenic not near genes chr2L 14503478 intergenic not near genes chr2L 14503560 intergenic not near genes chr2L_7_14500001 chr2L_14500001 RAL-774_125 425 chr2L 14549112 14549168 chr2L 14549238 14549294 14 125 4.5 5.5 5.0 2.3 182 chr2L 14549112 intergenic CG4218 - chr2L 14549203 intergenic CG4218 - chr2L 14549294 intergenic CG4218 - chr2L_14_14545001 chr2L_14545001 RAL-774_125 426 chr2L 14552576 14552610 chr2L 14552678 14552746 5 117 5.0 5.5 5.2 0.8 170 chr2L 14552576 intergenic not near genes chr2L 14552661 intergenic not near genes chr2L 14552746 intergenic not near genes chr2L_5_14550001 chr2L_14550001 RAL-774_125 427 chr2L 14555107 14555145 chr2L 14555236 14555274 6 128 5.5 6.0 5.8 0.9 167 chr2L 14555107 intergenic not near genes chr2L 14555190 intergenic not near genes chr2L 14555274 intergenic not near genes chr2L_6_14555001 chr2L_14555001 RAL-774_125 428 chr2L 14588359 14588410 chr2L 14588550 14588609 7 194 0.5 7.5 4.0 1.4 250 chr2L 14588359 intergenic CG42680 - chr2L 14588484 intergenic CG42680 - chr2L 14588609 intergenic CG42680 - chr2L_7_14585001 chr2L_14585001 RAL-774_125 429 chr2L 14618868 14618886 chr2L 14619299 14619317 jockey 4 431 4.5 2.0 3.2 1.0 449 chr2L 14618868 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619092 intron osp - chr2L 14619317 intron osp - chr2L_4_14615001 chr2L_14615001 RAL-774_125 430 chr2L 14642528 14642580 chr2L 14651731 14651793 roo 6 9211 2.5 3.5 3.0 1.5 9265 chr2L 14642528 intron osp - chr2L 14647160 intron osp - chr2L 14651793 intron osp - chr2L_6_14645001 chr2L_14645001 RAL-774_125 431 chr2L 14700413 14700486 chr2L 14702753 14702815 12 2332 27.0 21.0 24.0 0.5 2402 chr2L 14700413 intergenic not near genes chr2L 14701614 intergenic not near genes chr2L 14702815 intergenic not near genes chr2L_12_14700001 chr2L_14700001 RAL-774_125 432 chr2L 14803842 14803899 chr2L 14809092 14809147 copia 10 5251 5.5 4.5 5.0 1.7 5305 chr2L 14803842 intergenic not near genes chr2L 14806494 intergenic not near genes chr2L 14809147 intergenic not near genes chr2L_10_14805001 chr2L_14805001 RAL-774_125 433 chr2L 14840933 14841003 chr2L 14841065 14841140 7 137 3.0 4.0 3.5 1.6 207 chr2L 14840933 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841140 3` UTR CR43805 - chr2L_7_14840001 chr2L_14840001 RAL-774_125 434 chr2L 14887651 14887682 chr2L 14887779 14887810 5 128 7.5 5.5 6.5 0.7 159 chr2L 14887651 intergenic not near genes chr2L 14887730 intergenic not near genes chr2L 14887810 intergenic not near genes chr2L_5_14885001 chr2L_14885001 RAL-774_125 435 chr2L 14889911 14889979 chr2L 14890381 14890449 jockey 12 473 0.0 1.5 0.8 6.7 538 chr2L 14889911 intergenic not near genes chr2L 14890180 intergenic not near genes chr2L 14890449 intergenic not near genes chr2L_12_14890001 chr2L_14890001 RAL-774_125 436 chr2L 14982089 14982285 chr2L 14982253 14982421 9 150 0.0 0.0 0.0 9.0 332 chr2L 14982089 intron mol - chr2L 14982255 intron mol - chr2L 14982421 intron mol - chr2L_9_14980001 chr2L_14980001 RAL-774_125 437 chr2L 14984343 14984374 chr2L 14991995 14992026 opus 5 7650 8.5 7.0 7.8 0.6 7683 chr2L 14984343 intron mol - chr2L 14988184 intron mol - chr2L 14992026 intron mol - chr2L_5_14985001 chr2L_14985001 RAL-774_125 438 chr2L 14984378 14984398 chr2L 14991989 14992050 opus 4 7642 7.5 5.5 6.5 0.5 7672 chr2L 14984378 intron mol - chr2L 14988214 intron mol - chr2L 14992050 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-774_125 439 chr2L 15045112 15045154 chr2L 15045326 15045363 5 213 4.5 5.0 4.8 0.9 251 chr2L 15045112 3` UTR ck - chr2L 15045238 3` UTR ck - chr2L 15045363 3` UTR ck - chr2L_5_15045001 chr2L_15045001 RAL-774_125 440 chr2L 15135263 15135272 chr2L 15135354 15135392 5 114 3.5 3.0 3.2 1.2 129 chr2L 15135263 intergenic not near genes chr2L 15135328 intergenic not near genes chr2L 15135392 intergenic not near genes chr2L_5_15135001 chr2L_15135001 RAL-774_125 441 chr2L 15138728 15138800 chr2L 15138861 15138926 12 128 1.0 3.5 2.2 3.8 198 chr2L 15138728 intergenic not near genes chr2L 15138827 intergenic not near genes chr2L 15138926 intergenic not near genes chr2L_12_15135001 chr2L_15135001 RAL-774_125 442 chr2L 15156311 15156331 chr2L 15156434 15156458 4 126 4.0 2.5 3.2 1.0 147 chr2L 15156311 intergenic not near genes chr2L 15156384 intergenic not near genes chr2L 15156458 intergenic not near genes chr2L_4_15155001 chr2L_15155001 RAL-774_125 443 chr2L 15226334 15226386 chr2L 15226458 15226512 6 125 2.0 3.5 2.8 1.6 178 chr2L 15226334 intergenic not near genes chr2L 15226423 intergenic not near genes chr2L 15226512 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-774_125 444 chr2L 15289658 15289708 chr2L 15289792 15289847 12 136 1.0 2.0 1.5 4.8 189 chr2L 15289658 intergenic not near genes chr2L 15289752 intergenic not near genes chr2L 15289847 intergenic not near genes chr2L_12_15285001 chr2L_15285001 RAL-774_125 445 chr2L 15324554 15324591 chr2L 15324675 15324707 7 120 8.5 7.0 7.8 0.8 153 chr2L 15324554 intergenic not near genes chr2L 15324630 intergenic not near genes chr2L 15324707 intergenic not near genes chr2L_7_15320001 chr2L_15320001 RAL-774_125 446 chr2L 15324597 15324619 chr2L 15324664 15324725 4 104 5.5 6.5 6.0 0.6 128 chr2L 15324597 intergenic not near genes chr2L 15324661 intergenic not near genes chr2L 15324725 intergenic not near genes chr2L_4_15320001 chr2L_15320001 RAL-774_125 447 chr2L 15342304 15342361 chr2L 15342436 15342493 9 129 3.0 2.5 2.8 2.4 189 chr2L 15342304 intergenic not near genes chr2L 15342398 intergenic not near genes chr2L 15342493 intergenic not near genes chr2L_9_15340001 chr2L_15340001 RAL-774_125 448 chr2L 15427284 15427363 chr2L 15427430 15427509 10 146 5.0 4.5 4.8 1.7 225 chr2L 15427284 intergenic not near genes chr2L 15427396 intergenic not near genes chr2L 15427509 intergenic not near genes chr2L_10_15425001 chr2L_15425001 RAL-774_125 449 chr2L 15439232 15439302 chr2L 15439370 15439440 14 136 2.0 1.0 1.5 5.6 208 chr2L 15439232 intergenic not near genes chr2L 15439336 intergenic not near genes chr2L 15439440 intergenic not near genes chr2L_14_15435001 chr2L_15435001 RAL-774_125 450 chr2L 15483235 15483311 chr2L 15483371 15483447 13 132 3.0 2.0 2.5 3.7 212 chr2L 15483235 intergenic not near genes chr2L 15483341 intergenic not near genes chr2L 15483447 intergenic not near genes chr2L_13_15480001 chr2L_15480001 RAL-774_125 451 chr2L 15499878 15499896 chr2L 15500016 15500027 6 137 5.5 5.0 5.2 1.0 149 chr2L 15499878 intron lace + chr2L 15499952 intron lace + chr2L 15500027 intron lace + chr2L_6_15495001 chr2L_15495001 RAL-774_125 452 chr2L 15521596 15521655 chr2L 15521729 15521788 13 133 5.5 4.5 5.0 2.2 192 chr2L 15521596 intergenic CR43761 + chr2L 15521692 intergenic CR43761 + chr2L 15521788 intergenic CR43761 + chr2L_13_15520001 chr2L_15520001 RAL-774_125 453 chr2L 15553322 15553346 chr2L 15553514 15553543 6 194 5.0 0.0 2.5 1.7 221 chr2L 15553322 intron kek3 + chr2L 15553432 intron kek3 + chr2L 15553543 intron kek3 + chr2L_6_15550001 chr2L_15550001 RAL-774_125 454 chr2L 15586367 15586429 chr2L 15593469 15593531 297 10 7096 3.5 6.5 5.0 1.7 7164 chr2L 15586367 intergenic not near genes chr2L 15589949 intergenic not near genes chr2L 15593531 intergenic not near genes chr2L_10_15585001 chr2L_15585001 RAL-774_125 455 chr2L 15598744 15598794 chr2L 15598873 15598923 5 126 3.5 0.0 1.8 1.8 179 chr2L 15598744 intergenic not near genes chr2L 15598834 intergenic not near genes chr2L 15598923 intergenic not near genes chr2L_5_15595001 chr2L_15595001 RAL-774_125 456 chr2L 15640813 15640865 chr2L 15641165 15641227 8 357 4.5 4.5 4.5 1.5 414 chr2L 15640813 intergenic not near genes chr2L 15641020 intergenic not near genes chr2L 15641227 intergenic not near genes chr2L_8_15640001 chr2L_15640001 RAL-774_125 457 chr2L 15730838 15730888 chr2L 15730973 15731018 7 134 3.0 3.0 3.0 1.8 180 chr2L 15730838 intron CycE - chr2L 15730928 intron CycE - chr2L 15731018 intron CycE - chr2L_7_15730001 chr2L_15730001 RAL-774_125 458 chr2L 15750016 15750267 chr2L 15750179 15750401 4 156 0.0 0.0 0.0 4.0 385 chr2L 15750016 intron l(2)35Di - chr2L 15750208 intron l(2)35Di - chr2L 15750401 intron l(2)35Di - chr2L_4_15750001 chr2L_15750001 RAL-774_125 459 chr2L 15823313 15823358 chr2L 15823429 15823477 8 123 1.5 3.5 2.5 2.3 164 chr2L 15823313 intergenic CR44601 - chr2L 15823395 intergenic CR44601 - chr2L 15823477 intergenic not near genes chr2L_8_15820001 chr2L_15820001 RAL-774_125 460 chr2L 15826854 15826860 chr2L 15829293 15829304 Tabor 5 2443 0.0 5.5 2.8 1.3 2450 chr2L 15826854 intergenic not near genes chr2L 15828079 intergenic not near genes chr2L 15829304 intergenic not near genes chr2L_5_15825001 chr2L_15825001 RAL-774_125 461 chr2L 15826867 15826893 chr2L 15829291 15829336 Tabor 8 2436 0.0 5.5 2.8 2.1 2469 chr2L 15826867 intergenic not near genes chr2L 15828102 intergenic not near genes chr2L 15829336 intergenic not near genes chr2L_8_15825001 chr2L_15825001 RAL-774_125 462 chr2L 15933537 15933595 chr2L 15936125 15936183 5 2587 13.5 14.0 13.8 0.3 2646 chr2L 15933537 intron beat-Ib - chr2L 15934860 intron beat-Ib - chr2L 15936183 intron beat-Ib - chr2L_5_15930001 chr2L_15930001 RAL-774_125 463 chr2L 15933222 15933294 chr2L 15936082 15936149 20 2858 34.0 12.0 23.0 0.8 2927 chr2L 15933222 intron beat-Ib - chr2L 15934686 intron beat-Ib - chr2L 15936149 intron beat-Ib - chr2L_20_15930001 chr2L_15930001 RAL-774_125 464 chr2L 15955992 15956059 chr2L 15957502 15957505 hobo 11 1508 7.0 7.5 7.2 1.3 1513 chr2L 15955992 intron beat-Ib - chr2L 15956748 intron beat-Ib - chr2L 15957505 intron beat-Ib - chr2L_11_15955001 chr2L_15955001 RAL-774_125 465 chr2L 16001453 16001476 chr2L 16001590 16001614 4 138 4.5 10.0 7.2 0.5 161 chr2L 16001453 intron beat-Ic + chr2L 16001534 intron beat-Ic + chr2L 16001614 intron beat-Ic + chr2L_4_16000001 chr2L_16000001 RAL-774_125 466 chr2L 16008665 16008700 chr2L 16008793 16008828 4 128 4.5 4.0 4.2 0.8 163 chr2L 16008665 intron beat-Ic + chr2L 16008746 intron beat-Ic + chr2L 16008828 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-774_125 467 chr2L 16059915 16059982 chr2L 16060063 16060123 7 147 4.0 7.0 5.5 1.1 208 chr2L 16059915 intron beat-Ia + chr2L 16060019 intron beat-Ia + chr2L 16060123 intron beat-Ia + chr2L_7_16060001 chr2L_16060001 RAL-774_125 468 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 6 145889 18.0 21.5 19.8 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-774_125 469 chr2L 16078744 16078798 chr2L 16078938 16078995 8 194 5.5 4.0 4.8 1.4 251 chr2L 16078744 intron beat-Ia + chr2L 16078870 intron beat-Ia + chr2L 16078995 intron beat-Ia + chr2L_8_16075001 chr2L_16075001 RAL-774_125 470 chr2L 16115483 16115540 chr2L 16115609 16115666 7 123 6.0 4.5 5.2 1.1 183 chr2L 16115483 intergenic not near genes chr2L 16115574 intergenic not near genes chr2L 16115666 intergenic not near genes chr2L_7_16115001 chr2L_16115001 RAL-774_125 471 chr2L 16141096 16141192 chr2L 16146367 16146444 copia 9 5265 0.0 2.5 1.2 4.1 5348 chr2L 16141096 intergenic not near genes chr2L 16143770 intergenic not near genes chr2L 16146444 intergenic not near genes chr2L_9_16140001 chr2L_16140001 RAL-774_125 472 chr2L 16153692 16153752 chr2L 16160810 16160852 297 18 7115 4.5 2.0 3.2 4.3 7160 chr2L 16153692 intergenic not near genes chr2L 16157272 intergenic not near genes chr2L 16160852 intergenic not near genes chr2L_18_16155001 chr2L_16155001 RAL-774_125 473 chr2L 9084337 9084340 chr2L 16217660 16217660 5 7133321 7.0 21.5 14.2 0.3 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-774_125 474 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 8 145889 18.0 21.5 19.8 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_16140001 chr2L_16140001 RAL-774_125 475 chr2L 16226138 16226207 chr2L 16226275 16226337 15 135 3.0 5.0 4.0 3.0 199 chr2L 16226138 intergenic not near genes chr2L 16226238 intergenic not near genes chr2L 16226337 intergenic not near genes chr2L_15_16225001 chr2L_16225001 RAL-774_125 476 chr2L 16242022 16242066 chr2L 16242164 16242202 10 138 6.0 0.0 3.0 2.5 180 chr2L 16242022 5` UTR CG42818 + chr2L 16242112 exon CG42818 + chr2L 16242202 exon CG42818 + chr2L_10_16240001 chr2L_16240001 RAL-774_125 477 chr2L 16243178 16243370 chr2L 16243305 16243500 20 126 1.5 2.0 1.8 7.1 322 chr2L 16243178 exon CG42818 + chr2L 16243339 exon CG42818 + chr2L 16243500 exon CG42818 + chr2L_20_16240001 chr2L_16240001 RAL-774_125 478 chr2L 16254842 16254916 chr2L 16255150 16255225 12 308 4.0 8.5 6.2 1.7 383 chr2L 16254842 intron PRL-1 - chr2L 16255034 intron PRL-1 - chr2L 16255225 intron PRL-1 - chr2L_12_16255001 chr2L_16255001 RAL-774_125 479 chr2L 16280251 16280284 chr2L 16281447 16281483 1360 11 1209 3.5 9.0 6.2 1.5 1232 chr2L 16280251 intron crp - chr2L 16280867 intron crp - chr2L 16281483 intron crp - chr2L_11_16280001 chr2L_16280001 RAL-774_125 480 chr2L 16354727 16354782 chr2L 16354868 16354918 10 138 2.5 5.0 3.8 2.1 191 chr2L 16354727 intergenic CaBP1 -,CG4455 + chr2L 16354822 intergenic CaBP1 -,CG4455 + chr2L 16354918 3` UTR CaBP1 - chr2L_10_16350001 chr2L_16350001 RAL-774_125 481 chr2L 16363919 16363972 chr2L 16364207 16364268 10 295 0.0 7.5 3.8 2.1 349 chr2L 16363919 intergenic not near genes chr2L 16364094 intergenic not near genes chr2L 16364268 intergenic not near genes chr2L_10_16360001 chr2L_16360001 RAL-774_125 482 chr2L 16374205 16374242 chr2L 16374423 16374460 9 218 3.0 3.0 3.0 2.2 255 chr2L 16374205 intergenic not near genes chr2L 16374332 intergenic not near genes chr2L 16374460 intergenic not near genes chr2L_9_16370001 chr2L_16370001 RAL-774_125 483 chr2L 16434068 16434129 chr2L 16434196 16434261 18 132 3.0 3.0 3.0 4.5 193 chr2L 16434068 intron CG5888 - chr2L 16434164 intron CG5888 - chr2L 16434261 intron CG5888 - chr2L_18_16430001 chr2L_16430001 RAL-774_125 484 chr2L 16458784 16458853 chr2L 16459028 16459100 4 245 1.0 2.0 1.5 1.6 316 chr2L 16458784 intergenic not near genes chr2L 16458942 intergenic not near genes chr2L 16459100 intergenic not near genes chr2L_4_16455001 chr2L_16455001 RAL-774_125 485 chr2L 16500086 16500105 chr2L 16500218 16500237 4 129 0.0 4.0 2.0 1.3 151 chr2L 16500086 intron Tpr2 + chr2L 16500162 intron Tpr2 + chr2L 16500237 intron Tpr2 + chr2L_4_16500001 chr2L_16500001 RAL-774_125 486 chr2L 16507894 16507961 chr2L 16508027 16508099 8 135 0.0 5.0 2.5 2.3 205 chr2L 16507894 intergenic CG5953 -,Tpr2 + chr2L 16507996 intergenic CG5953 -,Tpr2 + chr2L 16508099 3` UTR CG5953 - chr2L_8_16505001 chr2L_16505001 RAL-774_125 487 chr2L 16511919 16511979 chr2L 16519077 16519143 HMS-Beagle 5 7161 3.5 3.5 3.5 1.1 7224 chr2L 16511919 intron CG5953 - chr2L 16515531 intron CG5953 - chr2L 16519143 intron CG5953 - chr2L_5_16515001 chr2L_16515001 RAL-774_125 488 chr2L 16570827 16570867 chr2L 16570947 16570993 6 125 0.0 4.5 2.2 1.9 166 chr2L 16570827 intron CG42389 + chr2L 16570910 intron CG42389 + chr2L 16570993 intron CG42389 + chr2L_6_16570001 chr2L_16570001 RAL-774_125 489 chr2L 16582670 16582724 chr2L 16583082 16583128 10 410 4.0 3.0 3.5 2.2 458 chr2L 16582670 intron CG42389 + chr2L 16582899 intron CG42389 + chr2L 16583128 intron CG42389 + chr2L_10_16580001 chr2L_16580001 RAL-774_125 490 chr2L 16645199 16645222 chr2L 16645659 16645716 8 477 6.5 6.0 6.2 1.1 517 chr2L 16645199 intron CG42389 + chr2L 16645458 intron CG42389 + chr2L 16645716 intron CG42389 + chr2L_8_16645001 chr2L_16645001 RAL-774_125 491 chr2L 16693882 16693937 chr2L 16694013 16694066 12 129 3.5 5.5 4.5 2.2 184 chr2L 16693882 intron grp + chr2L 16693974 intron grp + chr2L 16694066 intron grp + chr2L_12_16690001 chr2L_16690001 RAL-774_125 492 chr2L 16697034 16697055 chr2L 16697277 16697298 4 243 5.5 1.0 3.2 1.0 264 chr2L 16697034 intron grp + chr2L 16697166 intron grp + chr2L 16697298 intron grp + chr2L_4_16695001 chr2L_16695001 RAL-774_125 493 chr2L 16709027 16709094 chr2L 16709161 16709228 8 133 2.5 6.0 4.2 1.5 201 chr2L 16709027 intron CG31808 - chr2L 16709128 intron CG31808 - chr2L 16709228 intron CG31808 - chr2L_8_16705001 chr2L_16705001 RAL-774_125 494 chr2L 16721421 16721462 chr2L 16721563 16721604 7 140 2.0 4.5 3.2 1.7 183 chr2L 16721421 intron Cyt-c-p + chr2L 16721512 intron Cyt-c-p + chr2L 16721604 intron Cyt-c-p + chr2L_7_16720001 chr2L_16720001 RAL-774_125 495 chr2L 16722539 16722580 chr2L 16722675 16722716 7 136 4.0 1.0 2.5 2.0 177 chr2L 16722539 3` UTR Cyt-c-p + chr2L 16722628 3` UTR Cyt-c-p + chr2L 16722716 intergenic Cyt-c-p +,VhaSFD - chr2L_7_16720001 chr2L_16720001 RAL-774_125 496 chr2L 16764954 16764985 chr2L 16765049 16765115 8 126 4.5 1.0 2.8 2.1 161 chr2L 16764954 intergenic not near genes chr2L 16765034 intergenic not near genes chr2L 16765115 intergenic not near genes chr2L_8_16765001 chr2L_16765001 RAL-774_125 497 chr2L 16952065 16952131 chr2L 16952204 16952267 5 138 0.0 4.5 2.2 1.6 202 chr2L 16952065 intergenic not near genes chr2L 16952166 intergenic not near genes chr2L 16952267 intergenic not near genes chr2L_5_16950001 chr2L_16950001 RAL-774_125 498 chr2L 16958072 16958122 chr2L 16962910 16962960 Doc 8 4837 2.0 2.0 2.0 2.7 4888 chr2L 16958072 intergenic not near genes chr2L 16960516 intergenic not near genes chr2L 16962960 intergenic not near genes chr2L_8_16960001 chr2L_16960001 RAL-774_125 499 chr2L 16991432 16991484 chr2L 16991587 16991632 9 152 2.0 0.5 1.2 4.1 200 chr2L 16991432 intron beat-IIIb + chr2L 16991532 intron beat-IIIb + chr2L 16991632 intron beat-IIIb + chr2L_9_16990001 chr2L_16990001 RAL-774_125 500 chr2L 17028631 17028695 chr2L 17028819 17028883 9 181 2.0 3.0 2.5 2.6 252 chr2L 17028631 intergenic not near genes chr2L 17028757 intergenic not near genes chr2L 17028883 intergenic not near genes chr2L_9_17025001 chr2L_17025001 RAL-774_125 501 chr2L 17032461 17032510 chr2L 17032591 17032645 6 133 3.5 4.5 4.0 1.2 184 chr2L 17032461 intergenic not near genes chr2L 17032553 intergenic not near genes chr2L 17032645 intergenic not near genes chr2L_6_17030001 chr2L_17030001 RAL-774_125 502 chr2L 17050028 17050044 chr2L 17050127 17050131 4 112 1.0 2.5 1.8 1.4 103 chr2L 17050028 intergenic not near genes chr2L 17050080 intergenic not near genes chr2L 17050131 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-774_125 503 chr2L 17052387 17052421 chr2L 17052549 17052583 4 162 1.0 5.5 3.2 1.0 196 chr2L 17052387 intergenic not near genes chr2L 17052485 intergenic not near genes chr2L 17052583 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-774_125 504 chr2L 17053236 17053305 chr2L 17053696 17053765 11 457 2.5 3.0 2.8 2.9 529 chr2L 17053236 intergenic not near genes chr2L 17053500 intergenic not near genes chr2L 17053765 intergenic not near genes chr2L_11_17050001 chr2L_17050001 RAL-774_125 505 chr2L 17101858 17101909 chr2L 17101985 17102036 7 124 3.0 4.5 3.8 1.5 178 chr2L 17101858 intergenic not near genes chr2L 17101947 intergenic not near genes chr2L 17102036 intergenic not near genes chr2L_7_17100001 chr2L_17100001 RAL-774_125 506 chr2L 17102969 17103021 chr2L 17103107 17103159 7 136 2.0 4.0 3.0 1.8 190 chr2L 17102969 intergenic not near genes chr2L 17103064 intergenic not near genes chr2L 17103159 intergenic not near genes chr2L_7_17100001 chr2L_17100001 RAL-774_125 507 chr2L 17129805 17129852 chr2L 17129960 17129986 7 150 3.5 2.5 3.0 1.8 181 chr2L 17129805 intergenic not near genes chr2L 17129896 intergenic not near genes chr2L 17129986 intergenic not near genes chr2L_7_17125001 chr2L_17125001 RAL-774_125 508 chr2L 17157803 17157855 chr2L 17157935 17157987 5 129 3.0 2.0 2.5 1.4 184 chr2L 17157803 intron,intron CG34106 +,beat-IIIa + chr2L 17157895 intron,intron CG34106 +,beat-IIIa + chr2L 17157987 intron,intron CG34106 +,beat-IIIa + chr2L_5_17155001 chr2L_17155001 RAL-774_125 509 chr2L 17159811 17159877 chr2L 17159944 17160004 6 126 3.5 1.5 2.5 1.7 193 chr2L 17159811 intron,intron CG34106 +,beat-IIIa + chr2L 17159908 intron,intron CG34106 +,beat-IIIa + chr2L 17160004 intron,intron CG34106 +,beat-IIIa + chr2L_6_17155001 chr2L_17155001 RAL-774_125 510 chr2L 17167527 17167588 chr2L 17167818 17167879 pogo 11 291 6.0 2.5 4.2 2.1 352 chr2L 17167527 intron,intron CG34106 +,beat-IIIa + chr2L 17167703 intron,intron CG34106 +,beat-IIIa + chr2L 17167879 intron,intron CG34106 +,beat-IIIa + chr2L_11_17165001 chr2L_17165001 RAL-774_125 511 chr2L 17199124 17199183 chr2L 17200641 17200700 hobo 10 1514 3.0 1.5 2.2 3.1 1576 chr2L 17199124 intron beat-IIIc - chr2L 17199912 intron beat-IIIc - chr2L 17200700 intron beat-IIIc - chr2L_10_17195001 chr2L_17195001 RAL-774_125 512 chr2L 17273147 17273203 chr2L 17277980 17278036 F-element 11 4831 1.5 4.5 3.0 2.8 4889 chr2L 17273147 intergenic not near genes chr2L 17275592 intergenic not near genes chr2L 17278036 intergenic not near genes chr2L_11_17275001 chr2L_17275001 RAL-774_125 513 chr2L 17327881 17327927 chr2L 17328006 17328063 6 131 5.5 7.0 6.2 0.8 182 chr2L 17327881 intergenic not near genes chr2L 17327972 intergenic not near genes chr2L 17328063 intergenic not near genes chr2L_6_17325001 chr2L_17325001 RAL-774_125 514 chr2L 17351906 17351938 chr2L 17352052 17352090 4 150 3.0 0.5 1.8 1.4 184 chr2L 17351906 intergenic not near genes chr2L 17351998 intergenic not near genes chr2L 17352090 intergenic not near genes chr2L_4_17350001 chr2L_17350001 RAL-774_125 515 chr2L 17359985 17360051 chr2L 17360207 17360279 6 227 3.0 3.0 3.0 1.5 294 chr2L 17359985 intergenic not near genes chr2L 17360132 intergenic not near genes chr2L 17360279 intergenic not near genes chr2L_6_17360001 chr2L_17360001 RAL-774_125 516 chr2L 17425732 17425765 chr2L 17425909 17425942 8 175 6.5 6.0 6.2 1.1 210 chr2L 17425732 intron Dif - chr2L 17425837 intron Dif - chr2L 17425942 intron Dif - chr2L_8_17425001 chr2L_17425001 RAL-774_125 517 chr2L 17515019 17515092 chr2L 17515158 17515221 14 136 4.5 2.0 3.2 3.3 202 chr2L 17515019 intron Dhc36C + chr2L 17515120 intron Dhc36C + chr2L 17515221 intron Dhc36C + chr2L_14_17515001 chr2L_17515001 RAL-774_125 518 chr2L 17545992 17546046 chr2L 17546477 17546531 9 483 2.5 2.5 2.5 2.6 539 chr2L 17545992 intergenic not near genes chr2L 17546262 intergenic not near genes chr2L 17546531 intergenic not near genes chr2L_9_17545001 chr2L_17545001 RAL-774_125 519 chr2L 17569290 17569355 chr2L 17569506 17569571 13 210 5.5 7.0 6.2 1.8 281 chr2L 17569290 intergenic not near genes chr2L 17569430 intergenic not near genes chr2L 17569571 intergenic not near genes chr2L_13_17565001 chr2L_17565001 RAL-774_125 520 chr2L 17579851 17579908 chr2L 17579979 17580036 5 126 5.5 4.5 5.0 0.8 185 chr2L 17579851 5` UTR CR45698 + chr2L 17579944 5` UTR CR45698 + chr2L 17580036 intergenic CR45698 + chr2L_5_17575001 chr2L_17575001 RAL-774_125 521 chr2L 17656925 17656980 chr2L 17657059 17657114 12 131 3.0 3.5 3.2 2.9 189 chr2L 17656925 intron CadN - chr2L 17657020 intron CadN - chr2L 17657114 exon CadN - chr2L_12_17655001 chr2L_17655001 RAL-774_125 522 chr2L 17669065 17669124 chr2L 17669192 17669251 8 123 8.0 6.5 7.2 1.0 186 chr2L 17669065 intron CadN - chr2L 17669158 intron CadN - chr2L 17669251 intron CadN - chr2L_8_17665001 chr2L_17665001 RAL-774_125 523 chr2L 17687471 17687510 chr2L 17692266 17692305 F-element 12 4794 3.0 1.5 2.2 3.8 4834 chr2L 17687471 intron CadN - chr2L 17689888 intron CadN - chr2L 17692305 intron CadN - chr2L_12_17685001 chr2L_17685001 RAL-774_125 524 chr2L 17727820 17727869 chr2L 17729337 17729380 hobo 13 1506 4.0 7.0 5.5 2.0 1560 chr2L 17727820 intron CadN - chr2L 17728600 intron CadN - chr2L 17729380 intron CadN - chr2L_13_17725001 chr2L_17725001 RAL-774_125 525 chr2L 17819881 17819948 chr2L 17825134 17825181 copia 13 5245 2.5 5.0 3.8 2.7 5300 chr2L 17819881 intron CadN2 - chr2L 17822531 intron CadN2 - chr2L 17825181 intron CadN2 - chr2L_13_17820001 chr2L_17820001 RAL-774_125 526 chr2L 17855453 17855480 chr2L 17855581 17855593 7 125 10.0 3.5 6.8 0.9 140 chr2L 17855453 intron CadN2 - chr2L 17855523 intron CadN2 - chr2L 17855593 intron CadN2 - chr2L_7_17855001 chr2L_17855001 RAL-774_125 527 chr2L 17879969 17880024 chr2L 17880106 17880160 11 135 3.0 4.0 3.5 2.4 191 chr2L 17879969 intergenic not near genes chr2L 17880064 intergenic not near genes chr2L 17880160 intergenic not near genes chr2L_11_17880001 chr2L_17880001 RAL-774_125 528 chr2L 17880551 17880613 chr2L 17880713 17880775 10 160 5.0 2.0 3.5 2.2 224 chr2L 17880551 intergenic not near genes chr2L 17880663 intergenic not near genes chr2L 17880775 intergenic not near genes chr2L_10_17880001 chr2L_17880001 RAL-774_125 529 chr2L 17900341 17900396 chr2L 17900469 17900522 9 124 5.0 3.0 4.0 1.8 181 chr2L 17900341 intergenic not near genes chr2L 17900432 intergenic not near genes chr2L 17900522 intergenic not near genes chr2L_9_17900001 chr2L_17900001 RAL-774_125 530 chr2L 17907082 17907156 chr2L 17907324 17907369 11 232 1.0 2.5 1.8 3.9 287 chr2L 17907082 intergenic not near genes chr2L 17907226 intergenic not near genes chr2L 17907369 intergenic not near genes chr2L_11_17905001 chr2L_17905001 RAL-774_125 531 chr2L 17911926 17911981 chr2L 17914151 17914217 pogo 11 2226 7.0 8.0 7.5 1.3 2291 chr2L 17911926 intergenic not near genes chr2L 17913072 intergenic not near genes chr2L 17914217 intergenic CG43271 - chr2L_11_17910001 chr2L_17910001 RAL-774_125 532 chr2L 17951905 17951929 chr2L 17953422 17953446 hobo 13 1517 9.5 4.5 7.0 1.6 1541 chr2L 17951905 intergenic CR44398 -,CR44397 - chr2L 17952676 intergenic not near genes chr2L 17953446 intergenic not near genes chr2L_13_17950001 chr2L_17950001 RAL-774_125 533 chr2L 17951930 17951965 chr2L 17953415 17953471 hobo 12 1512 7.5 4.0 5.8 1.8 1541 chr2L 17951930 intergenic CR44398 -,CR44397 - chr2L 17952700 intergenic not near genes chr2L 17953471 intergenic not near genes chr2L_12_17950001 chr2L_17950001 RAL-774_125 534 chr2L 17989956 17990008 chr2L 17990077 17990119 12 116 6.0 5.5 5.8 1.8 163 chr2L 17989956 intergenic Prosbeta5R2 + chr2L 17990038 intergenic Prosbeta5R2 + chr2L 17990119 intergenic Prosbeta5R2 + chr2L_12_17990001 chr2L_17990001 RAL-774_125 535 chr2L 17986768 17986817 chr2L 17991446 17991510 12 4683 28.0 24.5 26.2 0.4 4742 chr2L 17986768 exon CG5681 + chr2L 17989139 intergenic not near genes chr2L 17991510 3` UTR Prosbeta5R2 + chr2L_12_17985001 chr2L_17985001 RAL-774_125 536 chr2L 18040687 18040751 chr2L 18040826 18040890 12 135 5.0 3.0 4.0 2.4 203 chr2L 18040687 intron rdo + chr2L 18040788 intron rdo + chr2L 18040890 intron rdo + chr2L_12_18040001 chr2L_18040001 RAL-774_125 537 chr2L 18046988 18047056 chr2L 18047120 18047188 12 129 5.5 3.0 4.2 2.3 200 chr2L 18046988 intron rdo + chr2L 18047088 intron rdo + chr2L 18047188 intron rdo + chr2L_12_18045001 chr2L_18045001 RAL-774_125 538 chr2L 18051838 18051887 chr2L 18061035 18061068 roo 10 9187 4.5 7.5 6.0 1.4 9230 chr2L 18051838 intron rdo + chr2L 18056453 intron rdo + chr2L 18061068 intron rdo + chr2L_10_18055001 chr2L_18055001 RAL-774_125 539 chr2L 18084039 18084078 chr2L 18084159 18084227 9 141 3.0 2.5 2.8 2.4 188 chr2L 18084039 intergenic CG31741 +,ninaD + chr2L 18084133 intergenic CG31741 + chr2L 18084227 intergenic CG31741 + chr2L_9_18080001 chr2L_18080001 RAL-774_125 540 chr2L 18111199 18111211 chr2L 18111340 18111347 5 140 8.5 5.5 7.0 0.6 148 chr2L 18111199 intergenic not near genes chr2L 18111273 intergenic not near genes chr2L 18111347 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-774_125 541 chr2L 18136898 18136946 chr2L 18137020 18137078 12 130 5.5 5.0 5.2 1.9 180 chr2L 18136898 intron kel - chr2L 18136988 intron kel - chr2L 18137078 intron kel - chr2L_12_18135001 chr2L_18135001 RAL-774_125 542 chr2L 18154278 18154345 chr2L 18154405 18154475 18 132 2.5 3.0 2.8 4.7 197 chr2L 18154278 exon CG17681 + chr2L 18154376 exon CG17681 + chr2L 18154475 3` UTR CG17681 + chr2L_18_18150001 chr2L_18150001 RAL-774_125 543 chr2L 18248422 18248476 chr2L 18248545 18248604 12 122 7.5 2.5 5.0 2.0 182 chr2L 18248422 intron CG42750 - chr2L 18248513 intron CG42750 - chr2L 18248604 intron CG42750 - chr2L_12_18245001 chr2L_18245001 RAL-774_125 544 chr2L 18264011 18264083 chr2L 18264138 18264199 12 124 3.5 1.5 2.5 3.4 188 chr2L 18264011 intron CG42750 - chr2L 18264105 intron CG42750 - chr2L 18264199 intron CG42750 - chr2L_12_18260001 chr2L_18260001 RAL-774_125 545 chr2L 18298913 18298958 chr2L 18299025 18299059 5 110 3.5 6.0 4.8 0.9 146 chr2L 18298913 intergenic not near genes chr2L 18298986 intergenic not near genes chr2L 18299059 intergenic not near genes chr2L_5_18295001 chr2L_18295001 RAL-774_125 546 chr2L 18307864 18307917 chr2L 18307980 18308044 15 125 9.5 2.5 6.0 2.1 180 chr2L 18307864 intergenic CR43353 - chr2L 18307954 intergenic CR43353 - chr2L 18308044 intergenic CR43353 - chr2L_15_18305001 chr2L_18305001 RAL-774_125 547 chr2L 18407994 18408023 chr2L 18412817 18412857 Doc 5 4832 10.5 2.5 6.5 0.7 4863 chr2L 18407994 intergenic not near genes chr2L 18410426 intergenic not near genes chr2L 18412857 intergenic not near genes chr2L_5_18410001 chr2L_18410001 RAL-774_125 548 chr2L 18565553 18565599 chr2L 18565671 18565725 18 118 2.5 4.5 3.5 4.0 172 chr2L 18565553 intron Pde11 - chr2L 18565639 intron Pde11 - chr2L 18565725 intron Pde11 - chr2L_18_18565001 chr2L_18565001 RAL-774_125 549 chr2L 18777061 18777118 chr2L 18777191 18777248 15 125 5.5 6.0 5.8 2.2 187 chr2L 18777061 intron ham - chr2L 18777154 intron ham - chr2L 18777248 intron ham - chr2L_15_18775001 chr2L_18775001 RAL-774_125 550 chr2L 18811387 18811432 chr2L 18811519 18811564 8 131 3.5 1.0 2.2 2.5 177 chr2L 18811387 intergenic CG10570 -,CG42502 - chr2L 18811476 intergenic CG10570 -,CG42502 - chr2L 18811564 intergenic not near genes chr2L_8_18810001 chr2L_18810001 RAL-774_125 551 chr2L 18812451 18812572 chr2L 18812585 18812879 18 299 0.5 0.5 0.5 12.0 428 chr2L 18812451 intergenic CG17325 +,CG42305 + chr2L 18812665 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812879 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_18_18810001 chr2L_18810001 RAL-774_125 552 chr2L 18876813 18876882 chr2L 18876941 18877010 17 127 3.0 4.0 3.5 3.8 197 chr2L 18876813 intron tup - chr2L 18876912 intron tup - chr2L 18877010 intron tup - chr2L_17_18875001 chr2L_18875001 RAL-774_125 553 chr2L 18902574 18902605 chr2L 18902905 18902935 8 330 6.0 0.0 3.0 2.0 361 chr2L 18902574 intergenic not near genes chr2L 18902754 intergenic not near genes chr2L 18902935 intergenic not near genes chr2L_8_18900001 chr2L_18900001 RAL-774_125 554 chr2L 18962188 18962259 chr2L 18962327 18962398 9 142 0.0 3.0 1.5 3.6 210 chr2L 18962188 intron Nak - chr2L 18962293 intron Nak - chr2L 18962398 intron Nak - chr2L_9_18960001 chr2L_18960001 RAL-774_125 555 chr2L 19070239 19070300 chr2L 19070363 19070409 12 129 5.0 1.0 3.0 3.0 170 chr2L 19070239 intergenic CG10702 - chr2L 19070324 intergenic CG10702 - chr2L 19070409 intergenic not near genes chr2L_12_19070001 chr2L_19070001 RAL-774_125 556 chr2L 19089305 19089357 chr2L 19089410 19089456 14 116 3.0 4.5 3.8 2.9 151 chr2L 19089305 intron Lim3 - chr2L 19089380 intron Lim3 - chr2L 19089456 intron Lim3 - chr2L_14_19085001 chr2L_19085001 RAL-774_125 557 chr2L 19144892 19145168 chr2L 19145020 19145295 21 128 8.0 6.5 7.2 2.6 403 chr2L 19144892 intron brat + chr2L 19145094 intron brat + chr2L 19145295 intron brat + chr2L_21_19145001 chr2L_19145001 RAL-774_125 558 chr2L 19147335 19147392 chr2L 19154417 19154474 297 11 7080 4.5 7.5 6.0 1.6 7139 chr2L 19147335 intron brat + chr2L 19150904 intron brat + chr2L 19154474 intron brat + chr2L_11_19150001 chr2L_19150001 RAL-774_125 559 chr2L 19246056 19246103 chr2L 19246441 19246505 7 390 5.0 4.5 4.8 1.2 449 chr2L 19246056 intergenic not near genes chr2L 19246280 intergenic not near genes chr2L 19246505 intergenic not near genes chr2L_7_19245001 chr2L_19245001 RAL-774_125 560 chr2L 19246781 19246846 chr2L 19246910 19246966 8 127 5.0 3.5 4.2 1.5 185 chr2L 19246781 intergenic not near genes chr2L 19246874 intergenic not near genes chr2L 19246966 intergenic not near genes chr2L_8_19245001 chr2L_19245001 RAL-774_125 561 chr2L 19344983 19345035 chr2L 19357242 19357293 blood 11 12257 5.0 4.0 4.5 2.0 12310 chr2L 19344983 intron dnt - chr2L 19351138 intron dnt - chr2L 19357293 intron dnt - chr2L_11_19350001 chr2L_19350001 RAL-774_125 562 chr2L 19357506 19357565 chr2L 19357644 19357705 17 134 5.5 3.5 4.5 3.1 199 chr2L 19357506 intron dnt - chr2L 19357606 intron dnt - chr2L 19357705 intron dnt - chr2L_17_19355001 chr2L_19355001 RAL-774_125 563 chr2L 19361663 19361718 chr2L 19361800 19361853 6 137 5.0 3.0 4.0 1.2 190 chr2L 19361663 intron dnt - chr2L 19361758 intron dnt - chr2L 19361853 intron dnt - chr2L_6_19360001 chr2L_19360001 RAL-774_125 564 chr2L 19441018 19441087 chr2L 19441145 19441214 17 123 7.0 6.5 6.8 2.2 196 chr2L 19441018 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441214 5` UTR CG10237 - chr2L_17_19440001 chr2L_19440001 RAL-774_125 565 chr2L 19469125 19469199 chr2L 19469260 19469334 22 133 4.0 2.0 3.0 5.5 209 chr2L 19469125 5` UTR CR45722 + chr2L 19469230 5` UTR CR45722 + chr2L 19469334 5` UTR CR45722 + chr2L_22_19465001 chr2L_19465001 RAL-774_125 566 chr2L 19520139 19520193 chr2L 19520263 19520312 6 118 1.5 3.5 2.5 1.7 173 chr2L 19520139 intron CG10132 + chr2L 19520226 intron CG10132 + chr2L 19520312 intron CG10132 + chr2L_6_19520001 chr2L_19520001 RAL-774_125 567 chr2L 19543097 19543137 chr2L 19543231 19543265 7 132 7.5 1.0 4.2 1.3 168 chr2L 19543097 intron ref(2)P + chr2L 19543181 intron ref(2)P + chr2L 19543265 intron ref(2)P + chr2L_7_19540001 chr2L_19540001 RAL-774_125 568 chr2L 19559955 19560026 chr2L 19560258 19560320 11 299 7.0 2.0 4.5 2.0 365 chr2L 19559955 exon Tep5 + chr2L 19560138 exon Tep5 + chr2L 19560320 intron Tep5 + chr2L_11_19560001 chr2L_19560001 RAL-774_125 569 chr2L 19560803 19560865 chr2L 19560933 19561010 8 136 3.5 0.0 1.8 2.9 207 chr2L 19560803 exon Tep5 + chr2L 19560906 exon Tep5 + chr2L 19561010 exon Tep5 + chr2L_8_19560001 chr2L_19560001 RAL-774_125 570 chr2L 19561313 19561352 chr2L 19561505 19561543 6 190 3.5 6.5 5.0 1.0 230 chr2L 19561313 exon Tep5 + chr2L 19561428 exon Tep5 + chr2L 19561543 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-774_125 571 chr2L 19587758 19587819 chr2L 19587890 19587966 10 136 2.5 3.0 2.8 2.6 208 chr2L 19587758 intron Lar + chr2L 19587862 intron Lar + chr2L 19587966 intron Lar + chr2L_10_19585001 chr2L_19585001 RAL-774_125 572 chr2L 19601544 19601600 chr2L 19601666 19601721 9 125 3.5 5.0 4.2 1.7 177 chr2L 19601544 intron,intron Lar +,CR44978 - chr2L 19601632 intron,intron Lar +,CR44978 - chr2L 19601721 intron,intron Lar +,CR44978 - chr2L_9_19600001 chr2L_19600001 RAL-774_125 573 chr2L 19608579 19608606 chr2L 19608719 19608747 6 141 3.5 2.5 3.0 1.5 168 chr2L 19608579 intron Lar + chr2L 19608663 intron Lar + chr2L 19608747 intron Lar + chr2L_6_19605001 chr2L_19605001 RAL-774_125 574 chr2L 19620047 19620114 chr2L 19621086 19621138 jockey 12 1035 3.0 2.0 2.5 3.4 1091 chr2L 19620047 intron Lar + chr2L 19620592 intron Lar + chr2L 19621138 intron Lar + chr2L_12_19620001 chr2L_19620001 RAL-774_125 575 chr2L 19652539 19652590 chr2L 19674023 19674059 opus 7 21481 5.0 6.5 5.8 1.0 21520 chr2L 19652539 intron Lar + chr2L 19663299 intron Lar + chr2L 19674059 intron Lar + chr2L_7_19660001 chr2L_19660001 RAL-774_125 576 chr2L 19696354 19696415 chr2L 19696504 19696554 4 142 0.0 8.5 4.2 0.8 200 chr2L 19696354 intron Lar + chr2L 19696454 intron Lar + chr2L 19696554 intron Lar + chr2L_4_19695001 chr2L_19695001 RAL-774_125 577 chr2L 19703502 19703560 chr2L 19712688 19712746 roo 18 9182 4.5 6.0 5.2 2.9 9244 chr2L 19703502 intron Lar + chr2L 19708124 intron Lar + chr2L 19712746 intron Lar + chr2L_18_19705001 chr2L_19705001 RAL-774_125 578 chr2L 19718489 19718515 chr2L 19718620 19718626 7 128 7.5 12.5 10.0 0.6 137 chr2L 19718489 intron Lar + chr2L 19718558 intron Lar + chr2L 19718626 intron Lar + chr2L_7_19715001 chr2L_19715001 RAL-774_125 579 chr2L 19737311 19737369 chr2L 19740830 19740887 1360 8 3502 5.5 4.0 4.8 1.4 3576 chr2L 19737311 intergenic Nf-YB + chr2L 19739099 intergenic not near genes chr2L 19740887 intergenic not near genes chr2L_8_19735001 chr2L_19735001 RAL-774_125 580 chr2L 19762777 19762830 chr2L 19763049 19763111 pogo 11 282 3.5 1.5 2.5 3.1 334 chr2L 19762777 exon fbp - chr2L 19762944 intron fbp - chr2L 19763111 intron fbp - chr2L_11_19760001 chr2L_19760001 RAL-774_125 581 chr2L 19773124 19773184 chr2L 19773261 19773321 6 137 4.5 4.0 4.2 1.2 197 chr2L 19773124 intergenic not near genes chr2L 19773222 intergenic not near genes chr2L 19773321 intergenic not near genes chr2L_6_19770001 chr2L_19770001 RAL-774_125 582 chr2L 19776625 19776659 chr2L 19776745 19776789 4 126 10.5 5.5 8.0 0.4 164 chr2L 19776625 3` UTR CdGAPr - chr2L 19776707 3` UTR CdGAPr - chr2L 19776789 3` UTR CdGAPr - chr2L_4_19775001 chr2L_19775001 RAL-774_125 583 chr2L 19811931 19811947 chr2L 19812309 19812335 4 386 0.0 3.0 1.5 1.6 404 chr2L 19811931 intron sick + chr2L 19812133 intron sick + chr2L 19812335 intron sick + chr2L_4_19810001 chr2L_19810001 RAL-774_125 584 chr2L 19823243 19823294 chr2L 19823382 19823433 9 138 6.5 5.5 6.0 1.3 190 chr2L 19823243 intron sick + chr2L 19823338 intron sick + chr2L 19823433 intron sick + chr2L_9_19820001 chr2L_19820001 RAL-774_125 585 chr2L 19824381 19824420 chr2L 19824503 19824553 8 126 4.5 2.0 3.2 1.9 172 chr2L 19824381 intron sick + chr2L 19824467 intron sick + chr2L 19824553 intron sick + chr2L_8_19820001 chr2L_19820001 RAL-774_125 586 chr2L 19837242 19837308 chr2L 19837367 19837421 12 125 5.5 8.0 6.8 1.5 179 chr2L 19837242 intron sick + chr2L 19837332 intron sick + chr2L 19837421 intron sick + chr2L_12_19835001 chr2L_19835001 RAL-774_125 587 chr2L 20005848 20005891 chr2L 20010968 20011017 flea 12 5123 4.5 5.0 4.8 2.1 5169 chr2L 20005848 intron CG43861 - chr2L 20008432 intron CG43861 - chr2L 20011017 intron CG43861 - chr2L_12_20005001 chr2L_20005001 RAL-774_125 588 chr2L 20022040 20022102 chr2L 20022203 20022250 13 160 5.0 3.0 4.0 2.6 210 chr2L 20022040 intergenic not near genes chr2L 20022145 intergenic not near genes chr2L 20022250 intergenic not near genes chr2L_13_20020001 chr2L_20020001 RAL-774_125 589 chr2L 20034576 20034639 chr2L 20034704 20034770 5 130 0.0 2.5 1.2 2.3 194 chr2L 20034576 intron sNPF + chr2L 20034673 intron sNPF + chr2L 20034770 intron sNPF + chr2L_5_20030001 chr2L_20030001 RAL-774_125 590 chr2L 20041399 20041453 chr2L 20041523 20041566 14 123 5.5 8.0 6.8 1.8 167 chr2L 20041399 intron sNPF + chr2L 20041482 intron sNPF + chr2L 20041566 intron sNPF + chr2L_14_20040001 chr2L_20040001 RAL-774_125 591 chr2L 20069477 20069546 chr2L 20069607 20069671 18 119 5.5 3.5 4.5 3.3 194 chr2L 20069477 exon bwa + chr2L 20069574 intron bwa + chr2L 20069671 intron bwa + chr2L_18_20065001 chr2L_20065001 RAL-774_125 592 chr2L 20124301 20124350 chr2L 20124409 20124473 7 124 5.5 5.0 5.2 1.1 172 chr2L 20124301 intergenic not near genes chr2L 20124387 intergenic not near genes chr2L 20124473 intergenic not near genes chr2L_7_20120001 chr2L_20120001 RAL-774_125 593 chr2L 20272086 20272136 chr2L 20282835 20282897 copia 12 10757 2.5 7.5 5.0 2.0 10811 chr2L 20272086 intergenic not near genes chr2L 20277492 intergenic not near genes chr2L 20282897 intergenic not near genes chr2L_12_20275001 chr2L_20275001 RAL-774_125 594 chr2L 20291508 20291568 chr2L 20291634 20291696 6 126 3.5 4.5 4.0 1.2 188 chr2L 20291508 intergenic not near genes chr2L 20291602 intergenic not near genes chr2L 20291696 intergenic not near genes chr2L_6_20290001 chr2L_20290001 RAL-774_125 595 chr2L 20296463 20296536 chr2L 20296594 20296667 12 129 1.0 2.0 1.5 4.8 204 chr2L 20296463 intergenic CR43414 - chr2L 20296565 intergenic CR43414 - chr2L 20296667 3` UTR CR43414 - chr2L_12_20295001 chr2L_20295001 RAL-774_125 596 chr2L 20303128 20303165 chr2L 20310646 20310683 blood 8 7517 6.5 6.0 6.2 1.1 7555 chr2L 20303128 intergenic not near genes chr2L 20306906 intergenic not near genes chr2L 20310683 intergenic not near genes chr2L_8_20305001 chr2L_20305001 RAL-774_125 597 chr2L 20310839 20310892 chr2L 20310966 20311021 6 128 3.5 4.0 3.8 1.2 182 chr2L 20310839 intergenic spir + chr2L 20310930 intergenic spir + chr2L 20311021 intergenic spir + chr2L_6_20310001 chr2L_20310001 RAL-774_125 598 chr2L 20372175 20372223 chr2L 20372475 20372523 pogo 10 298 2.5 6.0 4.2 1.9 348 chr2L 20372175 intergenic Ugt37a1 - chr2L 20372349 intergenic Ugt37a1 - chr2L 20372523 exon Ugt37a1 - chr2L_10_20370001 chr2L_20370001 RAL-774_125 599 chr2L 20424012 20424068 chr2L 20424141 20424203 11 127 5.5 3.0 4.2 2.1 191 chr2L 20424012 intron CG15130 - chr2L 20424108 intron CG15130 - chr2L 20424203 intron CG15130 - chr2L_11_20420001 chr2L_20420001 RAL-774_125 600 chr2L 20468342 20468401 chr2L 20468483 20468556 INE-1 11 147 3.0 2.0 2.5 3.1 214 chr2L 20468342 intron CR44980 - chr2L 20468449 intron CR44980 - chr2L 20468556 intron CR44980 - chr2L_11_20465001 chr2L_20465001 RAL-774_125 601 chr2L 20498648 20498708 chr2L 20498797 20498851 16 147 3.0 9.0 6.0 2.3 203 chr2L 20498648 intergenic not near genes chr2L 20498750 intergenic not near genes chr2L 20498851 intergenic not near genes chr2L_16_20495001 chr2L_20495001 RAL-774_125 602 chr2L 20568611 20568686 chr2L 20569051 20569126 X-element 15 435 3.0 1.5 2.2 4.7 515 chr2L 20568611 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569126 intron CR45347 + chr2L_15_20565001 chr2L_20565001 RAL-774_125 603 chr2L 20576180 20576247 chr2L 20583693 20583755 blood 20 7515 2.0 5.5 3.8 4.2 7575 chr2L 20576180 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583755 3` UTR CR44909 - chr2L_20_20575001 chr2L_20575001 RAL-774_125 604 chr2L 20601749 20601812 chr2L 20601877 20601940 8 127 4.0 2.0 3.0 2.0 191 chr2L 20601749 intron CR44909 - chr2L 20601844 intron CR44909 - chr2L 20601940 intron CR44909 - chr2L_8_20600001 chr2L_20600001 RAL-774_125 605 chr2L 20602679 20602742 chr2L 20602817 20602880 7 138 0.0 4.0 2.0 2.3 201 chr2L 20602679 intron CR44909 - chr2L 20602780 intron CR44909 - chr2L 20602880 intron CR44909 - chr2L_7_20600001 chr2L_20600001 RAL-774_125 606 chr2L 20623878 20623943 chr2L 20624007 20624055 13 121 10.5 5.0 7.8 1.5 177 chr2L 20623878 intron CR44909 - chr2L 20623966 intron CR44909 - chr2L 20624055 intron CR44909 - chr2L_13_20620001 chr2L_20620001 RAL-774_125 607 chr2L 20715537 20715568 chr2L 20715665 20715696 4 128 7.5 2.5 5.0 0.7 159 chr2L 20715537 intergenic not near genes chr2L 20715616 intergenic not near genes chr2L 20715696 intergenic not near genes chr2L_4_20715001 chr2L_20715001 RAL-774_125 608 chr2L 20818478 20818539 chr2L 20818609 20818671 11 130 3.0 5.5 4.2 2.1 193 chr2L 20818478 exon CheB38a - chr2L 20818574 intergenic CheB38a - chr2L 20818671 intergenic CheB38a - chr2L_11_20815001 chr2L_20815001 RAL-774_125 609 chr2L 20835789 20835829 chr2L 20836556 20836590 Quasimodo 6 766 3.0 5.5 4.2 1.2 801 chr2L 20835789 5` UTR Oseg5 - chr2L 20836190 intergenic Oseg5 -,Spn38F - chr2L 20836590 intergenic Spn38F - chr2L_6_20835001 chr2L_20835001 RAL-774_125 610 chr2L 20891486 20891545 chr2L 20896637 20896696 jockey 7 5150 2.0 4.0 3.0 1.8 5210 chr2L 20891486 intron,intron CG43739 -,sky - chr2L 20894091 intron,intron CG43739 -,sky - chr2L 20896696 intron,intron CG43739 -,sky - chr2L_7_20890001 chr2L_20890001 RAL-774_125 611 chr2L 20946917 20946961 chr2L 20947039 20947078 6 126 3.0 4.5 3.8 1.2 161 chr2L 20946917 intergenic CR44606 - chr2L 20946998 intergenic CR44606 - chr2L 20947078 intergenic CR44606 - chr2L_6_20945001 chr2L_20945001 RAL-774_125 612 chr2L 20957998 20958070 chr2L 20958348 20958421 16 350 3.5 3.5 3.5 3.6 423 chr2L 20957998 intergenic not near genes chr2L 20958210 intergenic not near genes chr2L 20958421 intergenic not near genes chr2L_16_20955001 chr2L_20955001 RAL-774_125 613 chr2L 20958883 20958908 chr2L 20958995 20959037 8 128 4.5 4.5 4.5 1.5 154 chr2L 20958883 intergenic not near genes chr2L 20958960 intergenic not near genes chr2L 20959037 intergenic not near genes chr2L_8_20955001 chr2L_20955001 RAL-774_125 614 chr2L 20976612 20976661 chr2L 20981476 20981516 X-element 5 4860 4.5 4.0 4.2 1.0 4904 chr2L 20976612 intron CG42238 - chr2L 20979064 intron CG42238 - chr2L 20981516 intron CG42238 - chr2L_5_20975001 chr2L_20975001 RAL-774_125 615 chr2L 21020251 21020299 chr2L 21023972 21024023 NOF 5 3722 1.5 6.0 3.8 1.0 3772 chr2L 21020251 intron CG42238 - chr2L 21022137 intron CG42238 - chr2L 21024023 intron CG42238 - chr2L_5_21020001 chr2L_21020001 RAL-774_125 616 chr2L 21041108 21041158 chr2L 21049419 21049447 Tirant 7 8305 4.5 7.5 6.0 1.0 8339 chr2L 21041108 intron CG42238 - chr2L 21045278 intron CG42238 - chr2L 21049447 intron CG42238 - chr2L_7_21045001 chr2L_21045001 RAL-774_125 617 chr2L 21088888 21088940 chr2L 21089015 21089073 11 130 1.5 5.0 3.2 2.6 185 chr2L 21088888 intergenic ppk13 -,CG9259 + chr2L 21088980 intergenic ppk13 -,CG9259 + chr2L 21089073 intergenic CG9259 +,ppk13 - chr2L_11_21085001 chr2L_21085001 RAL-774_125 618 chr2L 21215624 21215671 chr2L 21215730 21215797 9 122 4.5 2.5 3.5 2.0 173 chr2L 21215624 intron Atg18b - chr2L 21215710 intron Atg18b - chr2L 21215797 intron Atg18b - chr2L_9_21215001 chr2L_21215001 RAL-774_125 619 chr2L 21246491 21246535 chr2L 21246606 21246680 14 131 6.0 2.5 4.2 2.7 189 chr2L 21246491 intron Hr39 + chr2L 21246586 intron Hr39 + chr2L 21246680 intron Hr39 + chr2L_14_21245001 chr2L_21245001 RAL-774_125 620 chr2L 21286566 21286627 chr2L 21286694 21286756 6 128 3.5 5.5 4.5 1.1 190 chr2L 21286566 exon Mio - chr2L 21286661 intron Mio - chr2L 21286756 intron Mio - chr2L_6_21285001 chr2L_21285001 RAL-774_125 621 chr2L 21347519 21347574 chr2L 21355040 21355094 blood 10 7520 3.5 0.5 2.0 3.3 7575 chr2L 21347519 intron Tsp39D + chr2L 21351306 intron Tsp39D + chr2L 21355094 intron Tsp39D + chr2L_10_21350001 chr2L_21350001 RAL-774_125 622 chr2L 21355562 21355604 chr2L 21355757 21355799 8 194 5.0 1.0 3.0 2.0 237 chr2L 21355562 exon Tsp39D + chr2L 21355680 intron Tsp39D + chr2L 21355799 intron Tsp39D + chr2L_8_21355001 chr2L_21355001 RAL-774_125 623 chr2L 21355608 21355620 chr2L 21355752 21355815 5 185 4.5 1.0 2.8 1.3 207 chr2L 21355608 intron Tsp39D + chr2L 21355712 intron Tsp39D + chr2L 21355815 intron Tsp39D + chr2L_5_21355001 chr2L_21355001 RAL-774_125 624 chr2L 21377437 21377491 chr2L 21378048 21378102 4 604 7.5 6.5 7.0 0.5 665 chr2L 21377437 3` UTR CG8665 + chr2L 21377770 3` UTR CG8665 + chr2L 21378102 intergenic CG8665 + chr2L_4_21375001 chr2L_21375001 RAL-774_125 625 chr2L 21394338 21394383 chr2L 21394460 21394491 4 118 10.5 1.0 5.8 0.6 153 chr2L 21394338 intergenic not near genes chr2L 21394414 intergenic not near genes chr2L 21394491 intergenic not near genes chr2L_4_21390001 chr2L_21390001 RAL-774_125 626 chr2L 21667473 21667524 chr2L 21667729 21667780 8 255 6.5 7.0 6.8 1.0 307 chr2L 21667473 intron CG2225 - chr2L 21667626 intron CG2225 - chr2L 21667780 intron CG2225 - chr2L_8_21665001 chr2L_21665001 RAL-774_125 627 chr2L 21691827 21691846 chr2L 21698343 21698367 Burdock 5 6520 5.0 11.5 8.2 0.5 6540 chr2L 21691827 intron CG31619 + chr2L 21695097 intron CG31619 + chr2L 21698367 intron CG31619 + chr2L_5_21695001 chr2L_21695001 RAL-774_125 628 chr2L 21744902 21744936 chr2L 21745061 21745063 5 151 8.0 11.0 9.5 0.5 161 chr2L 21744902 intron step - chr2L 21744982 intron step - chr2L 21745063 intron step - chr2L_5_21740001 chr2L_21740001 RAL-774_125 629 chr2L 21750044 21750106 chr2L 21750327 21750389 9 280 4.0 0.0 2.0 3.0 345 chr2L 21750044 intron step - chr2L 21750216 intron step - chr2L 21750389 intron step - chr2L_9_21750001 chr2L_21750001 RAL-774_125 630 chr2L 21754627 21754681 chr2L 21754758 21754812 9 131 3.5 3.0 3.2 2.1 185 chr2L 21754627 intron step - chr2L 21754720 intron step - chr2L 21754812 intron step - chr2L_9_21750001 chr2L_21750001 RAL-774_125 631 chr2L 21819286 21819343 chr2L 21819421 21819481 12 134 4.0 3.5 3.8 2.5 195 chr2L 21819286 intergenic CR44786 + chr2L 21819384 intergenic CR44786 + chr2L 21819481 intergenic CR44786 + chr2L_12_21815001 chr2L_21815001 RAL-774_125 632 chr2L 21882541 21882595 chr2L 21882668 21882721 11 127 7.0 4.5 5.8 1.6 180 chr2L 21882541 intergenic not near genes chr2L 21882631 intergenic not near genes chr2L 21882721 intergenic not near genes chr2L_11_21880001 chr2L_21880001 RAL-774_125 633 chr2L 21981647 21981708 chr2L 21990862 21990901 roo 15 9202 3.0 4.5 3.8 3.1 9254 chr2L 21981647 exon CG2528 - chr2L 21986274 intron CG2528 - chr2L 21990901 exon CG2528 - chr2L_15_21985001 chr2L_21985001 RAL-774_125 634 chr2L 22005718 22005767 chr2L 22005858 22005907 8 137 9.5 0.0 4.8 1.4 189 chr2L 22005718 intergenic not near genes chr2L 22005812 intergenic not near genes chr2L 22005907 intergenic not near genes chr2L_8_22005001 chr2L_22005001 RAL-774_125 635 chr2L 22037327 22037385 chr2L 22037679 22037737 INE-1 8 350 3.0 0.5 1.8 2.9 410 chr2L 22037327 intergenic not near genes chr2L 22037532 intergenic CG41434 + chr2L 22037737 intergenic CG41434 + chr2L_8_22035001 chr2L_22035001 RAL-774_125 636 chr2L 22047206 22047257 chr2L 22047381 22047427 8 170 1.0 3.5 2.2 2.5 221 chr2L 22047206 intergenic not near genes chr2L 22047316 intergenic not near genes chr2L 22047427 intergenic not near genes chr2L_8_22045001 chr2L_22045001 RAL-774_125 637 chr2L 22073016 22073024 chr2L 22073145 22073158 INE-1 5 132 7.5 2.0 4.8 0.9 142 chr2L 22073016 intergenic CG31702 + chr2L 22073087 intergenic CG31702 + chr2L 22073158 intergenic CG31702 + chr2L_5_22070001 chr2L_22070001 RAL-774_125 638 chr2L 22197846 22197906 chr2L 22198095 22198155 4 248 0.5 4.5 2.5 1.1 309 chr2L 22197846 intron Ir40a - chr2L 22198000 intron Ir40a - chr2L 22198155 intron Ir40a - chr2L_4_22195001 chr2L_22195001 RAL-774_125 639 chr2L 22212088 22212161 chr2L 22212685 22212753 10 593 2.0 1.5 1.8 3.6 665 chr2L 22212088 intron Ir40a - chr2L 22212420 intron Ir40a - chr2L 22212753 exon Ir40a - chr2L_10_22210001 chr2L_22210001 RAL-774_125 640 chr2L 22239386 22239455 chr2L 22239512 22239546 12 121 3.0 2.0 2.5 3.4 160 chr2L 22239386 intron CR43765 - chr2L 22239466 3` UTR CR43765 - chr2L 22239546 3` UTR CR43765 - chr2L_12_22235001 chr2L_22235001 RAL-774_125 641 chr2L 22258579 22258631 chr2L 22260743 22260791 G6 7 2169 1.5 3.0 2.2 2.2 2212 chr2L 22258579 intergenic Tif-IA + chr2L 22259685 intergenic not near genes chr2L 22260791 intergenic not near genes chr2L_7_22255001 chr2L_22255001 RAL-774_125 642 chr2L 22350227 22350284 chr2L 22350368 22350436 16 148 4.0 5.5 4.8 2.8 209 chr2L 22350227 intron CG17018 + chr2L 22350332 intron CG17018 + chr2L 22350436 intron CG17018 + chr2L_16_22350001 chr2L_22350001 RAL-774_125 643 chr2L 22510371 22510383 chr2L 22510630 22510642 4 258 9.0 4.0 6.5 0.5 271 chr2L 22510371 intergenic not near genes chr2L 22510506 intergenic not near genes chr2L 22510642 intergenic not near genes chr2L_4_22510001 chr2L_22510001 RAL-774_125 644 chr2L 22545934 22545981 chr2L 22546080 22546117 15 140 7.0 6.0 6.5 2.0 183 chr2L 22545934 intron CG17490 + chr2L 22546026 intron CG17490 + chr2L 22546117 intron CG17490 + chr2L_15_22545001 chr2L_22545001 RAL-774_125 645 chr2L 22548889 22548893 chr2L 22550137 22550141 1360 4 1248 2.0 5.0 3.5 0.9 1252 chr2L 22548889 intergenic CG17490 + chr2L 22549515 intergenic not near genes chr2L 22550141 intergenic CG17493 + chr2L_4_22545001 chr2L_22545001 RAL-774_125 646 chr2L 22548894 22548931 chr2L 22550132 22550200 1360 6 1263 0.0 4.5 2.2 1.9 1306 chr2L 22548894 intergenic CG17490 + chr2L 22549547 intergenic not near genes chr2L 22550200 intergenic CG17493 + chr2L_6_22545001 chr2L_22545001 RAL-774_125 647 chr2L 22581936 22582000 chr2L 22583775 22583840 S-element 7 1838 5.5 5.0 5.2 1.1 1904 chr2L 22581936 intron CG17494 + chr2L 22582888 intron CG17494 + chr2L 22583840 intron CG17494 + chr2L_7_22580001 chr2L_22580001 RAL-774_125 648 chr2L 22674024 22674046 chr2L 22674149 22674173 4 125 1.0 4.5 2.8 1.1 149 chr2L 22674024 intron CG40006 - chr2L 22674098 intron CG40006 - chr2L 22674173 intron CG40006 - chr2L_4_22670001 chr2L_22670001 RAL-774_125 649 chr2L 22676079 22676152 chr2L 22676367 22676440 17 287 2.5 2.0 2.2 5.3 361 chr2L 22676079 exon CG40006 - chr2L 22676260 intron CG40006 - chr2L 22676440 intron CG40006 - chr2L_17_22675001 chr2L_22675001 RAL-774_125 650 chr2L 22693849 22693945 chr2L 22694005 22694075 12 134 0.5 1.5 1.0 6.0 226 chr2L 22693849 intron CG40006 - chr2L 22693962 intron CG40006 - chr2L 22694075 intron CG40006 - chr2L_12_22690001 chr2L_22690001 RAL-774_125 651 chr2L 22776379 22776447 chr2L 22778218 22778286 S-element 10 1838 5.5 2.5 4.0 2.0 1907 chr2L 22776379 intergenic not near genes chr2L 22777332 intergenic not near genes chr2L 22778286 intergenic not near genes chr2L_10_22775001 chr2L_22775001 RAL-774_125 652 chr2L 22983902 22983966 chr2L 22984017 22984092 10 121 2.5 5.5 4.0 2.0 190 chr2L 22983902 intron cta + chr2L 22983997 intron cta + chr2L 22984092 intron cta + chr2L_10_22980001 chr2L_22980001 RAL-774_125 653 chr2L 23168814 23168878 chr2L 23168935 23168991 5 115 4.0 7.0 5.5 0.8 177 chr2L 23168814 intron CG12567 - chr2L 23168902 intron CG12567 - chr2L 23168991 intron CG12567 - chr2L_5_23165001 chr2L_23165001 RAL-774_125 654 chr2R 529321 529345 chr2R 537981 538010 Max-element 7 8661 8.0 7.5 7.8 0.8 8689 chr2R 529321 intron CG40378 + chr2R 533666 intron CG40378 + chr2R 538010 intron CG40378 + chr2R_7_530001 chr2R_530001 RAL-774_125 655 chr2R 552715 552787 chr2R 553981 554007 1360 5 1249 12.5 11.0 11.8 0.4 1292 chr2R 552715 intron CG40378 + chr2R 553361 intron CG40378 + chr2R 554007 intron CG40378 + chr2R_5_550001 chr2R_550001 RAL-774_125 656 chr2R 652209 652226 chr2R 652780 652812 4 580 17.5 15.0 16.2 0.2 603 chr2R 652209 intergenic not near genes chr2R 652510 intergenic not near genes chr2R 652812 intergenic not near genes chr2R_4_650001 chr2R_650001 RAL-774_125 657 chr2R 1516570 1516603 chr2R 1521342 1521381 1731 14 4776 10.5 12.5 11.5 1.1 4811 chr2R 1516570 exon Maf1 - chr2R 1518976 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_14_1515001 chr2R_1515001 RAL-774_125 658 chr2R 2015093 2015156 chr2R 2015215 2015283 12 125 3.0 2.0 2.5 3.4 190 chr2R 2015093 intron CG17684 - chr2R 2015188 intron CG17684 - chr2R 2015283 intron CG17684 - chr2R_12_2015001 chr2R_2015001 RAL-774_125 659 chr2R 2110463 2110497 chr2R 2118071 2118105 17.6 4 7608 4.5 5.0 4.8 0.7 7642 chr2R 2110463 intron CG17684 - chr2R 2114284 intron CG17684 - chr2R 2118105 intron CG17684 - chr2R_4_2110001 chr2R_2110001 RAL-774_125 660 chr2R 2498942 2499002 chr2R 2508139 2508194 roo 11 9195 4.0 2.5 3.2 2.6 9252 chr2R 2498942 intron MFS17 - chr2R 2503568 intron MFS17 - chr2R 2508194 intron MFS17 - chr2R_11_2500001 chr2R_2500001 RAL-774_125 661 chr2R 2591493 2591508 chr2R 2594212 2594234 roo 6 2725 22.5 14.0 18.2 0.3 2741 chr2R 2591493 intergenic not near genes chr2R 2592864 intergenic not near genes chr2R 2594234 intergenic not near genes chr2R_6_2590001 chr2R_2590001 RAL-774_125 662 chr2R 2875333 2875393 chr2R 2878898 2878958 HMS-Beagle 4 3565 15.5 12.0 13.8 0.3 3625 chr2R 2875333 intergenic not near genes chr2R 2877146 intergenic not near genes chr2R 2878958 intergenic not near genes chr2R_4_2875001 chr2R_2875001 RAL-774_125 663 chr2R 3144039 3144105 chr2R 3393367 3393433 Doc 4 249328 18.0 5.5 11.8 0.3 249394 chr2R 3144039 intron CG42596 + chr2R 3268736 intergenic not near genes chr2R 3393433 intergenic not near genes chr2R_4_3265001 chr2R_3265001 RAL-774_125 664 chr2R 3532580 3532616 chr2R 3536067 3536109 Doc 4 3492 0.0 2.0 1.0 2.0 3529 chr2R 3532580 intergenic not near genes chr2R 3534344 intergenic not near genes chr2R 3536109 intergenic not near genes chr2R_4_3530001 chr2R_3530001 RAL-774_125 665 chr2R 3702630 3702667 chr2R 3702765 3702790 7 123 10.0 6.0 8.0 0.8 160 chr2R 3702630 intergenic not near genes chr2R 3702710 intergenic not near genes chr2R 3702790 intergenic not near genes chr2R_7_3700001 chr2R_3700001 RAL-774_125 666 chr2R 3927660 3927686 chr2R 3927802 3927827 7 144 6.5 6.5 6.5 0.9 167 chr2R 3927660 intron uex - chr2R 3927744 intron uex - chr2R 3927827 intron uex - chr2R_7_3925001 chr2R_3925001 RAL-774_125 667 chr2R 3927688 3927714 chr2R 3927835 3927861 4 146 3.5 9.5 6.5 0.5 173 chr2R 3927688 intron uex - chr2R 3927774 intron uex - chr2R 3927861 intron uex - chr2R_4_3925001 chr2R_3925001 RAL-774_125 668 chr2R 4015272 4015342 chr2R 4015495 4015565 12 221 3.5 2.0 2.8 3.2 293 chr2R 4015272 intron Haspin + chr2R 4015418 intron Haspin + chr2R 4015565 intron Haspin + chr2R_12_4015001 chr2R_4015001 RAL-774_125 669 chr2R 4312881 4312979 chr2R 4313036 4313113 12 136 0.0 5.0 2.5 3.4 232 chr2R 4312881 intergenic not near genes chr2R 4312997 intergenic not near genes chr2R 4313113 intergenic not near genes chr2R_12_4310001 chr2R_4310001 RAL-774_125 670 chr2R 4329512 4329533 chr2R 4329648 4329662 6 132 7.5 1.5 4.5 1.1 150 chr2R 4329512 intron Gprk1 - chr2R 4329587 intron Gprk1 - chr2R 4329662 intron Gprk1 - chr2R_6_4325001 chr2R_4325001 RAL-774_125 671 chr2R 4350738 4350782 chr2R 4350850 4350901 8 124 6.0 3.5 4.8 1.4 163 chr2R 4350738 exon Gprk1 - chr2R 4350820 intron Gprk1 - chr2R 4350901 intron Gprk1 - chr2R_8_4350001 chr2R_4350001 RAL-774_125 672 chr2R 4605661 4605686 chr2R 4606099 4606133 6 441 6.0 6.0 6.0 0.9 472 chr2R 4605661 intron p120ctn + chr2R 4605897 intron p120ctn + chr2R 4606133 intron p120ctn + chr2R_6_4605001 chr2R_4605001 RAL-774_125 673 chr2R 4621271 4621343 chr2R 4621857 4621933 13 582 4.0 3.5 3.8 2.7 662 chr2R 4621271 3` UTR CR44101 - chr2R 4621602 3` UTR CR44101 - chr2R 4621933 3` UTR CR44101 - chr2R_13_4620001 chr2R_4620001 RAL-774_125 674 chr2R 4622920 4622981 chr2R 4624129 4624170 1360 13 1203 4.5 6.5 5.5 2.0 1250 chr2R 4622920 intergenic CR44101 - chr2R 4623545 intergenic not near genes chr2R 4624170 intergenic not near genes chr2R_13_4620001 chr2R_4620001 RAL-774_125 675 chr2R 4688098 4688130 chr2R 4688241 4688261 7 139 3.5 4.5 4.0 1.4 163 chr2R 4688098 intergenic not near genes chr2R 4688180 intergenic not near genes chr2R 4688261 intergenic not near genes chr2R_7_4685001 chr2R_4685001 RAL-774_125 676 chr2R 4704780 4704841 chr2R 4705140 4705207 15 357 7.0 4.0 5.5 2.3 427 chr2R 4704780 intron Nipped-B - chr2R 4704994 intron Nipped-B - chr2R 4705207 intron Nipped-B - chr2R_15_4700001 chr2R_4700001 RAL-774_125 677 chr2R 4746185 4746233 chr2R 4746861 4746909 13 674 6.5 6.0 6.2 1.8 724 chr2R 4746185 intron conu + chr2R 4746547 intron conu + chr2R 4746909 intron conu + chr2R_13_4745001 chr2R_4745001 RAL-774_125 678 chr2R 4838835 4838899 chr2R 4840407 4840439 transib2 8 1567 5.5 6.0 5.8 1.2 1604 chr2R 4838835 intergenic not near genes chr2R 4839637 intergenic not near genes chr2R 4840439 intergenic not near genes chr2R_8_4835001 chr2R_4835001 RAL-774_125 679 chr2R 4870699 4870742 chr2R 4871254 4871298 R1A1-element 13 555 4.0 5.0 4.5 2.4 599 chr2R 4870699 intergenic not near genes chr2R 4870998 intergenic not near genes chr2R 4871298 intergenic not near genes chr2R_13_4870001 chr2R_4870001 RAL-774_125 680 chr2R 4908869 4908907 chr2R 4909007 4909020 6 130 10.0 6.0 8.0 0.7 151 chr2R 4908869 intergenic not near genes chr2R 4908944 intergenic not near genes chr2R 4909020 intergenic not near genes chr2R_6_4905001 chr2R_4905001 RAL-774_125 681 chr2R 5096607 5096679 chr2R 5096738 5096785 26 122 2.5 2.5 2.5 7.4 178 chr2R 5096607 intergenic not near genes chr2R 5096696 intergenic not near genes chr2R 5096785 intergenic not near genes chr2R_26_5095001 chr2R_5095001 RAL-774_125 682 chr2R 5103019 5103061 chr2R 5103135 5103193 11 120 3.5 6.5 5.0 1.8 174 chr2R 5103019 intergenic not near genes chr2R 5103106 intergenic not near genes chr2R 5103193 intergenic not near genes chr2R_11_5100001 chr2R_5100001 RAL-774_125 683 chr2R 5125197 5125275 chr2R 5125565 5125633 12 366 2.5 4.0 3.2 2.9 436 chr2R 5125197 intron gus - chr2R 5125415 intron gus - chr2R 5125633 intron gus - chr2R_12_5125001 chr2R_5125001 RAL-774_125 684 chr2R 5150553 5150618 chr2R 5150685 5150749 12 125 5.0 5.5 5.2 1.9 196 chr2R 5150553 intron Atf6 + chr2R 5150651 intron Atf6 + chr2R 5150749 intron Atf6 + chr2R_12_5150001 chr2R_5150001 RAL-774_125 685 chr2R 5237303 5237345 chr2R 5237435 5237472 9 128 4.0 0.0 2.0 3.0 169 chr2R 5237303 intron Nipped-A - chr2R 5237388 intron Nipped-A - chr2R 5237472 intron Nipped-A - chr2R_9_5235001 chr2R_5235001 RAL-774_125 686 chr2R 5240207 5240230 chr2R 5240327 5240346 5 118 9.0 11.0 10.0 0.5 139 chr2R 5240207 intron Nipped-A - chr2R 5240276 intron Nipped-A - chr2R 5240346 intron Nipped-A - chr2R_5_5240001 chr2R_5240001 RAL-774_125 687 chr2R 5341321 5341374 chr2R 5341574 5341602 4 240 6.0 0.0 3.0 1.0 281 chr2R 5341321 intergenic CG10465 - chr2R 5341462 intergenic CG10465 - chr2R 5341602 intergenic not near genes chr2R_4_5340001 chr2R_5340001 RAL-774_125 688 chr2R 5363468 5363506 chr2R 5363581 5363634 4 124 8.0 5.5 6.8 0.5 166 chr2R 5363468 5` UTR CR42646 + chr2R 5363551 intron CR42646 + chr2R 5363634 intron CR42646 + chr2R_4_5360001 chr2R_5360001 RAL-774_125 689 chr2R 5396225 5396277 chr2R 5396507 5396565 6 285 6.0 4.5 5.2 1.0 340 chr2R 5396225 intergenic not near genes chr2R 5396395 intergenic not near genes chr2R 5396565 intergenic not near genes chr2R_6_5395001 chr2R_5395001 RAL-774_125 690 chr2R 5417962 5418017 chr2R 5420644 5420699 Burdock 10 2680 3.0 9.5 6.2 1.4 2737 chr2R 5417962 intron laccase2 + chr2R 5419330 intron laccase2 + chr2R 5420699 intron laccase2 + chr2R_10_5415001 chr2R_5415001 RAL-774_125 691 chr2R 5460491 5460518 chr2R 5460632 5460671 5 147 11.5 8.0 9.8 0.5 180 chr2R 5460491 intergenic not near genes chr2R 5460581 intergenic not near genes chr2R 5460671 intergenic not near genes chr2R_5_5460001 chr2R_5460001 RAL-774_125 692 chr2R 5460520 5460545 chr2R 5460629 5460684 8 136 10.0 7.5 8.8 0.8 164 chr2R 5460520 intergenic not near genes chr2R 5460602 intergenic not near genes chr2R 5460684 intergenic not near genes chr2R_8_5460001 chr2R_5460001 RAL-774_125 693 chr2R 5472323 5472388 chr2R 5472463 5472545 21 145 6.5 0.5 3.5 4.7 222 chr2R 5472323 intron CG30440 - chr2R 5472434 intron CG30440 - chr2R 5472545 intron CG30440 - chr2R_21_5470001 chr2R_5470001 RAL-774_125 694 chr2R 5476303 5476347 chr2R 5476897 5476931 12 590 9.0 4.5 6.8 1.5 628 chr2R 5476303 intron CG30440 - chr2R 5476617 intron CG30440 - chr2R 5476931 intron CG30440 - chr2R_12_5475001 chr2R_5475001 RAL-774_125 695 chr2R 5491652 5491687 chr2R 5491795 5491825 11 141 3.5 9.0 6.2 1.5 173 chr2R 5491652 intron CG30440 - chr2R 5491738 intron CG30440 - chr2R 5491825 intron CG30440 - chr2R_11_5490001 chr2R_5490001 RAL-774_125 696 chr2R 5509505 5509541 chr2R 5509646 5509687 4 143 2.5 4.0 3.2 1.0 182 chr2R 5509505 intron CG30438 + chr2R 5509596 intron CG30438 + chr2R 5509687 intron CG30438 + chr2R_4_5505001 chr2R_5505001 RAL-774_125 697 chr2R 5541896 5541950 chr2R 5542174 5542233 8 282 7.5 2.5 5.0 1.3 337 chr2R 5541896 intron CG30438 + chr2R 5542064 intron CG30438 + chr2R 5542233 intron CG30438 + chr2R_8_5540001 chr2R_5540001 RAL-774_125 698 chr2R 5621360 5621380 chr2R 5621485 5621504 4 126 7.0 9.5 8.2 0.4 144 chr2R 5621360 intergenic not near genes chr2R 5621432 intergenic not near genes chr2R 5621504 intergenic not near genes chr2R_4_5620001 chr2R_5620001 RAL-774_125 699 chr2R 5750433 5750453 chr2R 5750548 5750595 4 132 8.5 8.0 8.2 0.4 162 chr2R 5750433 intergenic not near genes chr2R 5750514 intergenic not near genes chr2R 5750595 intergenic not near genes chr2R_4_5750001 chr2R_5750001 RAL-774_125 700 chr2R 5772479 5772549 chr2R 5772623 5772693 9 143 2.0 2.5 2.2 2.8 214 chr2R 5772479 3` UTR Gp210 + chr2R 5772586 3` UTR Gp210 + chr2R 5772693 3` UTR Gp210 + chr2R_9_5770001 chr2R_5770001 RAL-774_125 701 chr2R 5772790 5772847 chr2R 5772921 5772979 9 132 1.0 2.5 1.8 3.2 189 chr2R 5772790 3` UTR Gp210 + chr2R 5772884 3` UTR Gp210 + chr2R 5772979 3` UTR Gp210 + chr2R_9_5770001 chr2R_5770001 RAL-774_125 702 chr2R 5790422 5790489 chr2R 5790557 5790624 7 134 2.5 3.5 3.0 1.8 202 chr2R 5790422 intergenic not near genes chr2R 5790523 intergenic not near genes chr2R 5790624 intergenic not near genes chr2R_7_5790001 chr2R_5790001 RAL-774_125 703 chr2R 5801988 5802031 chr2R 5802098 5802137 6 112 8.0 5.5 6.8 0.8 149 chr2R 5801988 intergenic not near genes chr2R 5802062 intergenic not near genes chr2R 5802137 intergenic not near genes chr2R_6_5800001 chr2R_5800001 RAL-774_125 704 chr2R 5837247 5837272 chr2R 5837359 5837402 6 121 6.5 6.5 6.5 0.8 155 chr2R 5837247 intron dpr12 + chr2R 5837324 intron dpr12 + chr2R 5837402 intron dpr12 + chr2R_6_5835001 chr2R_5835001 RAL-774_125 705 chr2R 5869235 5869299 chr2R 5874361 5874420 flea 19 5124 5.5 4.5 5.0 3.2 5185 chr2R 5869235 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874420 intergenic not near genes chr2R_19_5870001 chr2R_5870001 RAL-774_125 706 chr2R 5902119 5902181 chr2R 5909728 5909790 17.6 10 7609 1.5 4.5 3.0 2.5 7671 chr2R 5902119 5` UTR CG43366 + chr2R 5905954 intron CG43366 + chr2R 5909790 intron CG43366 + chr2R_10_5905001 chr2R_5905001 RAL-774_125 707 chr2R 5951164 5951179 chr2R 5951299 5951301 6 133 2.5 9.5 6.0 0.9 137 chr2R 5951164 intergenic not near genes chr2R 5951232 intergenic not near genes chr2R 5951301 intergenic not near genes chr2R_6_5950001 chr2R_5950001 RAL-774_125 708 chr2R 6033405 6033469 chr2R 6033534 6033599 14 130 4.0 8.5 6.2 1.9 194 chr2R 6033405 intron SCAP - chr2R 6033502 intron SCAP - chr2R 6033599 intron SCAP - chr2R_14_6030001 chr2R_6030001 RAL-774_125 709 chr2R 6096693 6096750 chr2R 6101921 6101950 BS 17 5233 2.0 4.5 3.2 4.0 5257 chr2R 6096693 intron EcR - chr2R 6099322 intron EcR - chr2R 6101950 intron EcR - chr2R_17_6095001 chr2R_6095001 RAL-774_125 710 chr2R 6178640 6178705 chr2R 6178771 6178835 15 135 3.5 5.5 4.5 2.7 195 chr2R 6178640 intergenic not near genes chr2R 6178738 intergenic not near genes chr2R 6178835 intergenic not near genes chr2R_15_6175001 chr2R_6175001 RAL-774_125 711 chr2R 6194654 6194691 chr2R 6194787 6194817 8 131 5.5 10.5 8.0 0.9 163 chr2R 6194654 intron Ptr - chr2R 6194736 intron Ptr - chr2R 6194817 intron Ptr - chr2R_8_6190001 chr2R_6190001 RAL-774_125 712 chr2R 6215350 6215417 chr2R 6215477 6215523 12 117 5.5 5.5 5.5 1.8 173 chr2R 6215350 intron bin3 + chr2R 6215436 intron bin3 + chr2R 6215523 intron bin3 + chr2R_12_6215001 chr2R_6215001 RAL-774_125 713 chr2R 6218062 6218106 chr2R 6218191 6218230 9 127 7.0 2.5 4.8 1.6 168 chr2R 6218062 intron,intron bin3 +,CR44161 - chr2R 6218146 intron,intron bin3 +,CR44161 - chr2R 6218230 intron,intron bin3 +,CR44161 - chr2R_9_6215001 chr2R_6215001 RAL-774_125 714 chr2R 6539806 6539839 chr2R 6539968 6540004 5 164 4.5 8.5 6.5 0.7 198 chr2R 6539806 intron jing + chr2R 6539905 intron jing + chr2R 6540004 intron jing + chr2R_5_6535001 chr2R_6535001 RAL-774_125 715 chr2R 6579744 6579782 chr2R 6584880 6584909 flea 6 5134 5.0 5.5 5.2 1.0 5165 chr2R 6579744 intron jing + chr2R 6582326 intron jing + chr2R 6584909 intron jing + chr2R_6_6580001 chr2R_6580001 RAL-774_125 716 chr2R 6607878 6607949 chr2R 6608030 6608101 15 150 3.5 4.0 3.8 3.1 223 chr2R 6607878 intron jing + chr2R 6607990 intron jing + chr2R 6608101 intron jing + chr2R_15_6605001 chr2R_6605001 RAL-774_125 717 chr2R 6613286 6613357 chr2R 6613430 6613501 10 144 2.5 2.0 2.2 3.1 215 chr2R 6613286 intron jing + chr2R 6613394 intron jing + chr2R 6613501 intron jing + chr2R_10_6610001 chr2R_6610001 RAL-774_125 718 chr2R 6664148 6664195 chr2R 6665982 6666019 S-element 6 1834 6.5 3.5 5.0 1.0 1871 chr2R 6664148 intron,intron Adf1 +,CR45128 - chr2R 6665084 intron Adf1 + chr2R 6666019 intron Adf1 + chr2R_6_6665001 chr2R_6665001 RAL-774_125 719 chr2R 6712558 6712595 chr2R 6712682 6712742 9 142 5.5 4.5 5.0 1.5 184 chr2R 6712558 intron,intron CG3409 -,CG45092 - chr2R 6712650 intron,intron CG3409 -,CG45092 - chr2R 6712742 intron,intron CG3409 -,CG45092 - chr2R_9_6710001 chr2R_6710001 RAL-774_125 720 chr2R 6819825 6819905 chr2R 6819955 6820005 21 123 3.5 3.0 3.2 5.0 180 chr2R 6819825 intergenic not near genes chr2R 6819915 intergenic not near genes chr2R 6820005 intergenic not near genes chr2R_21_6815001 chr2R_6815001 RAL-774_125 721 chr2R 6825439 6825457 chr2R 6825575 6825593 6 140 4.0 7.0 5.5 0.9 154 chr2R 6825439 intergenic not near genes chr2R 6825516 intergenic not near genes chr2R 6825593 intergenic not near genes chr2R_6_6825001 chr2R_6825001 RAL-774_125 722 chr2R 6915505 6915552 chr2R 6915649 6915697 9 140 5.0 7.0 6.0 1.3 192 chr2R 6915505 intron CG30158 + chr2R 6915601 intron CG30158 + chr2R 6915697 intron CG30158 + chr2R_9_6915001 chr2R_6915001 RAL-774_125 723 chr2R 6952122 6952176 chr2R 6959757 6959805 opus 6 7630 2.5 2.0 2.2 1.9 7683 chr2R 6952122 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955964 intron,intron mim -,CheB42c - chr2R 6959805 intron,intron mim -,CheB42c - chr2R_6_6955001 chr2R_6955001 RAL-774_125 724 chr2R 6978743 6978825 chr2R 6978947 6979007 12 191 0.0 7.5 3.8 2.5 264 chr2R 6978743 intron vimar - chr2R 6978875 intron vimar - chr2R 6979007 intron vimar - chr2R_12_6975001 chr2R_6975001 RAL-774_125 725 chr2R 7095923 7095963 chr2R 7096073 7096094 8 142 7.0 0.0 3.5 1.8 171 chr2R 7095923 intron esn + chr2R 7096008 intron esn + chr2R 7096094 intron esn + chr2R_8_7095001 chr2R_7095001 RAL-774_125 726 chr2R 7196534 7196583 chr2R 7201354 7201408 F-element 11 4824 5.5 4.5 5.0 1.8 4874 chr2R 7196534 intron pk + chr2R 7198971 intron pk + chr2R 7201408 intron pk + chr2R_11_7195001 chr2R_7195001 RAL-774_125 727 chr2R 7235799 7235842 chr2R 7240928 7240980 jockey 10 5132 4.5 2.5 3.5 2.2 5181 chr2R 7235799 intergenic not near genes chr2R 7238390 intergenic not near genes chr2R 7240980 intergenic not near genes chr2R_10_7235001 chr2R_7235001 RAL-774_125 728 chr2R 7262156 7262207 chr2R 7269260 7269291 297 4 7099 5.0 2.5 3.8 0.8 7135 chr2R 7262156 intergenic not near genes chr2R 7265724 intergenic not near genes chr2R 7269291 intergenic not near genes chr2R_4_7265001 chr2R_7265001 RAL-774_125 729 chr2R 7328077 7328138 chr2R 7328238 7328297 10 161 4.0 5.5 4.8 1.7 220 chr2R 7328077 intron,intron Dscam1 -,CR45129 + chr2R 7328187 intron,intron Dscam1 -,CR45129 + chr2R 7328297 intron,intron Dscam1 -,CR45129 + chr2R_10_7325001 chr2R_7325001 RAL-774_125 730 chr2R 7371701 7371758 chr2R 7371855 7371912 12 149 6.0 8.5 7.2 1.5 211 chr2R 7371701 intron Dscam1 - chr2R 7371806 intron Dscam1 - chr2R 7371912 intron Dscam1 - chr2R_12_7370001 chr2R_7370001 RAL-774_125 731 chr2R 7417860 7418149 chr2R 7417996 7418278 17 131 8.5 6.5 7.5 2.0 418 chr2R 7417860 intergenic not near genes chr2R 7418069 intergenic not near genes chr2R 7418278 intergenic not near genes chr2R_17_7415001 chr2R_7415001 RAL-774_125 732 chr2R 7608367 7608423 chr2R 7613620 7613675 I-element 7 5249 3.0 0.0 1.5 2.8 5308 chr2R 7608367 intron CG1358 - chr2R 7611021 intron CG1358 - chr2R 7613675 intron CG1358 - chr2R_7_7610001 chr2R_7610001 RAL-774_125 733 chr2R 7629042 7629050 chr2R 7629157 7629168 4 122 5.5 3.5 4.5 0.7 126 chr2R 7629042 intron CG43340 + chr2R 7629105 intron CG43340 + chr2R 7629168 intron CG43340 + chr2R_4_7625001 chr2R_7625001 RAL-774_125 734 chr2R 7629052 7629090 chr2R 7629150 7629217 5 120 3.0 3.0 3.0 1.2 165 chr2R 7629052 intron CG43340 + chr2R 7629134 intron CG43340 + chr2R 7629217 intron CG43340 + chr2R_5_7625001 chr2R_7625001 RAL-774_125 735 chr2R 7691979 7692027 chr2R 7692110 7692151 5 130 4.0 10.5 7.2 0.6 172 chr2R 7691979 intron CG1399 - chr2R 7692065 intron CG1399 - chr2R 7692151 intron CG1399 - chr2R_5_7690001 chr2R_7690001 RAL-774_125 736 chr2R 7815641 7815691 chr2R 7822144 7822210 Burdock 12 6516 5.5 5.0 5.2 1.9 6569 chr2R 7815641 intergenic CG1882 + chr2R 7818926 intergenic not near genes chr2R 7822210 3` UTR cathD - chr2R_12_7815001 chr2R_7815001 RAL-774_125 737 chr2R 7855235 7855301 chr2R 7855376 7855439 11 132 0.5 6.0 3.2 2.6 204 chr2R 7855235 intron Dgk - chr2R 7855337 intron Dgk - chr2R 7855439 intron Dgk - chr2R_11_7855001 chr2R_7855001 RAL-774_125 738 chr2R 7869149 7869209 chr2R 7873985 7874020 Doc 9 4829 4.5 3.5 4.0 1.8 4871 chr2R 7869149 intron Dgk - chr2R 7871584 intron Dgk - chr2R 7874020 intron Dgk - chr2R_9_7870001 chr2R_7870001 RAL-774_125 739 chr2R 7901649 7901703 chr2R 7901857 7901867 7 187 4.5 3.0 3.8 1.5 218 chr2R 7901649 intron CG30377 + chr2R 7901758 intron CG30377 + chr2R 7901867 intron CG30377 + chr2R_7_7900001 chr2R_7900001 RAL-774_125 740 chr2R 7997390 7997454 chr2R 7997546 7997610 13 155 4.5 4.5 4.5 2.4 220 chr2R 7997390 exon Hey - chr2R 7997500 intron Hey - chr2R 7997610 intron Hey - chr2R_13_7995001 chr2R_7995001 RAL-774_125 741 chr2R 8018095 8018147 chr2R 8018219 8018284 7 138 3.0 3.5 3.2 1.7 189 chr2R 8018095 intergenic not near genes chr2R 8018190 intergenic not near genes chr2R 8018284 intergenic not near genes chr2R_7_8015001 chr2R_8015001 RAL-774_125 742 chr2R 8026763 8026823 chr2R 8026889 8026949 5 126 3.5 1.5 2.5 1.4 186 chr2R 8026763 intergenic CR45267 + chr2R 8026856 intergenic CR45267 + chr2R 8026949 intergenic CR45267 + chr2R_5_8025001 chr2R_8025001 RAL-774_125 743 chr2R 8067021 8067063 chr2R 8067155 8067182 10 131 6.5 5.5 6.0 1.4 161 chr2R 8067021 intron CG17977 - chr2R 8067102 intron CG17977 - chr2R 8067182 exon CG17977 - chr2R_10_8065001 chr2R_8065001 RAL-774_125 744 chr2R 8089211 8089271 chr2R 8089347 8089407 10 134 2.5 3.5 3.0 2.5 196 chr2R 8089211 3` UTR sut2 + chr2R 8089309 intergenic sut2 +,sut3 + chr2R 8089407 intergenic sut3 +,sut2 + chr2R_10_8085001 chr2R_8085001 RAL-774_125 745 chr2R 8142351 8142389 chr2R 8142486 8142524 8 135 3.5 5.0 4.2 1.5 173 chr2R 8142351 intron Lpin - chr2R 8142438 intron Lpin - chr2R 8142524 intron Lpin - chr2R_8_8140001 chr2R_8140001 RAL-774_125 746 chr2R 8155540 8155613 chr2R 8155679 8155725 9 132 5.5 6.0 5.8 1.3 185 chr2R 8155540 intron,intron Lpin -,kermit - chr2R 8155632 intron,intron Lpin -,kermit - chr2R 8155725 intron,intron Lpin -,kermit - chr2R_9_8155001 chr2R_8155001 RAL-774_125 747 chr2R 8157850 8157911 chr2R 8157988 8158040 13 131 3.5 3.0 3.2 3.1 190 chr2R 8157850 5` UTR CR44068 + chr2R 8157945 5` UTR CR44068 + chr2R 8158040 5` UTR CR44068 + chr2R_13_8155001 chr2R_8155001 RAL-774_125 748 chr2R 8235990 8236021 chr2R 8236121 8236151 6 129 5.0 2.0 3.5 1.3 161 chr2R 8235990 intergenic not near genes chr2R 8236070 intergenic not near genes chr2R 8236151 intergenic not near genes chr2R_6_8235001 chr2R_8235001 RAL-774_125 749 chr2R 8249528 8249594 chr2R 8249660 8249721 12 130 2.5 4.5 3.5 2.7 193 chr2R 8249528 5` UTR CG44439 - chr2R 8249624 intergenic CG44439 - chr2R 8249721 intergenic CG44439 - chr2R_12_8245001 chr2R_8245001 RAL-774_125 750 chr2R 8252200 8252244 chr2R 8252330 8252372 6 128 3.5 1.0 2.2 1.9 172 chr2R 8252200 intergenic not near genes chr2R 8252286 intergenic not near genes chr2R 8252372 intergenic not near genes chr2R_6_8250001 chr2R_8250001 RAL-774_125 751 chr2R 8330856 8330884 chr2R 8331372 8331420 roo 7 532 5.5 9.0 7.2 0.9 564 chr2R 8330856 intron pdm3 + chr2R 8331138 intron pdm3 + chr2R 8331420 intron pdm3 + chr2R_7_8330001 chr2R_8330001 RAL-774_125 752 chr2R 8368144 8368207 chr2R 8368274 8368337 17 126 6.5 2.0 4.2 3.3 193 chr2R 8368144 intron pdm3 + chr2R 8368240 intron pdm3 + chr2R 8368337 intron pdm3 + chr2R_17_8365001 chr2R_8365001 RAL-774_125 753 chr2R 8398178 8398228 chr2R 8403009 8403059 Doc 8 4826 3.0 4.5 3.8 1.7 4881 chr2R 8398178 intron CG2121 - chr2R 8400618 intron CG2121 - chr2R 8403059 intron CG2121 - chr2R_8_8400001 chr2R_8400001 RAL-774_125 754 chr2R 8424601 8424647 chr2R 8424774 8424824 4 173 2.5 3.5 3.0 1.0 223 chr2R 8424601 intron CSN7 + chr2R 8424712 intron CSN7 + chr2R 8424824 intron CSN7 + chr2R_4_8420001 chr2R_8420001 RAL-774_125 755 chr2R 8452866 8452916 chr2R 8452987 8453007 11 124 6.0 8.0 7.0 1.4 141 chr2R 8452866 intergenic not near genes chr2R 8452936 intergenic not near genes chr2R 8453007 intergenic not near genes chr2R_11_8450001 chr2R_8450001 RAL-774_125 756 chr2R 8453054 8453086 chr2R 8453520 8453547 6 463 7.0 5.0 6.0 0.9 493 chr2R 8453054 intergenic not near genes chr2R 8453300 intergenic Mal-A2 + chr2R 8453547 intergenic Mal-A2 + chr2R_6_8450001 chr2R_8450001 RAL-774_125 757 chr2R 8480927 8480952 chr2R 8481101 8481126 5 173 5.0 5.0 5.0 0.8 199 chr2R 8480927 intron mtt - chr2R 8481026 intron mtt - chr2R 8481126 intron mtt - chr2R_5_8480001 chr2R_8480001 RAL-774_125 758 chr2R 8483918 8483987 chr2R 8484044 8484108 19 123 3.0 4.0 3.5 4.2 190 chr2R 8483918 intron mtt - chr2R 8484013 intron mtt - chr2R 8484108 intron mtt - chr2R_19_8480001 chr2R_8480001 RAL-774_125 759 chr2R 8508741 8508789 chr2R 8508860 8508908 7 123 2.5 4.5 3.5 1.6 167 chr2R 8508741 intron mtt - chr2R 8508824 intron mtt - chr2R 8508908 intron mtt - chr2R_7_8505001 chr2R_8505001 RAL-774_125 760 chr2R 8554087 8554134 chr2R 8554211 8554247 13 128 5.5 4.5 5.0 2.2 160 chr2R 8554087 intergenic not near genes chr2R 8554167 intergenic not near genes chr2R 8554247 intergenic not near genes chr2R_13_8550001 chr2R_8550001 RAL-774_125 761 chr2R 8569149 8569193 chr2R 8569507 8569555 9 360 4.0 4.0 4.0 1.8 406 chr2R 8569149 intergenic not near genes chr2R 8569352 intergenic not near genes chr2R 8569555 intergenic not near genes chr2R_9_8565001 chr2R_8565001 RAL-774_125 762 chr2R 8658240 8658256 chr2R 8658315 8658351 4 84 0.0 1.0 0.5 2.7 111 chr2R 8658240 intron ptc + chr2R 8658296 intron ptc + chr2R 8658351 intron ptc + chr2R_4_8655001 chr2R_8655001 RAL-774_125 763 chr2R 8691082 8691147 chr2R 8691595 8691666 15 509 3.5 3.5 3.5 3.3 584 chr2R 8691082 intergenic Jon44E + chr2R 8691374 intergenic Jon44E + chr2R 8691666 exon Jon44E + chr2R_15_8690001 chr2R_8690001 RAL-774_125 764 chr2R 8722732 8722787 chr2R 8723006 8723067 pogo 15 282 2.0 5.0 3.5 3.3 335 chr2R 8722732 intron CG14767 - chr2R 8722900 intron CG14767 - chr2R 8723067 intron CG14767 - chr2R_15_8720001 chr2R_8720001 RAL-774_125 765 chr2R 8742646 8742677 chr2R 8742782 8742810 6 134 6.5 8.0 7.2 0.7 164 chr2R 8742646 intron CG8740 + chr2R 8742728 intron CG8740 + chr2R 8742810 intron CG8740 + chr2R_6_8740001 chr2R_8740001 RAL-774_125 766 chr2R 8777877 8777942 chr2R 8784131 8784196 diver 9 6247 2.0 3.0 2.5 2.6 6319 chr2R 8777877 intergenic not near genes chr2R 8781036 intergenic not near genes chr2R 8784196 intergenic not near genes chr2R_9_8780001 chr2R_8780001 RAL-774_125 767 chr2R 8817540 8817612 chr2R 8817676 8817722 13 113 3.0 4.5 3.8 2.7 182 chr2R 8817540 intron sns + chr2R 8817631 intron sns + chr2R 8817722 intron sns + chr2R_13_8815001 chr2R_8815001 RAL-774_125 768 chr2R 8849186 8849257 chr2R 8849314 8849374 17 126 3.5 2.0 2.8 4.5 188 chr2R 8849186 intron sns + chr2R 8849280 intron sns + chr2R 8849374 intron sns + chr2R_17_8845001 chr2R_8845001 RAL-774_125 769 chr2R 8966118 8966176 chr2R 8966258 8966316 15 138 9.5 10.5 10.0 1.4 198 chr2R 8966118 intron CG8216 - chr2R 8966217 intron CG8216 - chr2R 8966316 intron CG8216 - chr2R_15_8965001 chr2R_8965001 RAL-774_125 770 chr2R 9016934 9016971 chr2R 9017054 9017091 10 125 7.0 7.5 7.2 1.2 157 chr2R 9016934 5` UTR CG13744 - chr2R 9017012 5` UTR CG13744 - chr2R 9017091 5` UTR CG13744 - chr2R_10_9015001 chr2R_9015001 RAL-774_125 771 chr2R 9019835 9019878 chr2R 9019942 9019959 12 116 4.5 3.0 3.8 2.5 124 chr2R 9019835 exon CG8170 - chr2R 9019897 exon CG8170 - chr2R 9019959 intron CG8170 - chr2R_12_9015001 chr2R_9015001 RAL-774_125 772 chr2R 9151275 9151317 chr2R 9157780 9157837 Burdock 9 6516 3.0 0.0 1.5 3.6 6562 chr2R 9151275 exon CG30345 + chr2R 9154556 intergenic not near genes chr2R 9157837 intergenic CG8008 - chr2R_9_9150001 chr2R_9150001 RAL-774_125 773 chr2R 9230179 9230240 chr2R 9230309 9230355 8 119 7.0 4.5 5.8 1.2 176 chr2R 9230179 intron hig - chr2R 9230267 intron hig - chr2R 9230355 exon hig - chr2R_8_9230001 chr2R_9230001 RAL-774_125 774 chr2R 9236567 9236575 chr2R 9236704 9236712 5 137 7.5 2.5 5.0 0.8 145 chr2R 9236567 intron hig - chr2R 9236640 intron hig - chr2R 9236712 intron hig - chr2R_5_9235001 chr2R_9235001 RAL-774_125 775 chr2R 9236579 9236608 chr2R 9236696 9236745 12 135 6.0 1.5 3.8 2.5 166 chr2R 9236579 intron hig - chr2R 9236662 intron hig - chr2R 9236745 intron hig - chr2R_12_9235001 chr2R_9235001 RAL-774_125 776 chr2R 9368107 9368134 chr2R 9368208 9368235 4 106 3.0 0.0 1.5 1.6 128 chr2R 9368107 intron CG13954 - chr2R 9368171 intron CG13954 - chr2R 9368235 intron CG13954 - chr2R_4_9365001 chr2R_9365001 RAL-774_125 777 chr2R 9371760 9371831 chr2R 9371935 9372006 14 174 2.5 4.5 3.5 3.1 246 chr2R 9371760 intron CG13954 - chr2R 9371883 intron CG13954 - chr2R 9372006 intron CG13954 - chr2R_14_9370001 chr2R_9370001 RAL-774_125 778 chr2R 9389114 9389177 chr2R 9389241 9389309 9 126 3.5 6.5 5.0 1.5 195 chr2R 9389114 5` UTR CG13954 - chr2R 9389212 5` UTR CG13954 - chr2R 9389309 5` UTR CG13954 - chr2R_9_9385001 chr2R_9385001 RAL-774_125 779 chr2R 9429754 9429826 chr2R 9429909 9429976 19 151 4.5 9.0 6.8 2.4 222 chr2R 9429754 intron Pdk + chr2R 9429865 intron Pdk + chr2R 9429976 intron Pdk + chr2R_19_9425001 chr2R_9425001 RAL-774_125 780 chr2R 9461196 9461249 chr2R 9461329 9461375 14 134 6.5 9.5 8.0 1.6 179 chr2R 9461196 intron Camta + chr2R 9461286 intron Camta + chr2R 9461375 intron Camta + chr2R_14_9460001 chr2R_9460001 RAL-774_125 781 chr2R 9479529 9479598 chr2R 9479659 9479728 18 129 9.0 7.0 8.0 2.0 199 chr2R 9479529 intergenic not near genes chr2R 9479628 intergenic not near genes chr2R 9479728 intergenic not near genes chr2R_18_9475001 chr2R_9475001 RAL-774_125 782 chr2R 9480038 9480062 chr2R 9490619 9490643 roo 5 10581 9.0 1.0 5.0 0.8 10605 chr2R 9480038 intergenic not near genes chr2R 9485340 intergenic not near genes chr2R 9490643 intergenic not near genes chr2R_5_9485001 chr2R_9485001 RAL-774_125 783 chr2R 9510621 9510697 chr2R 9510787 9510858 7 165 5.0 3.0 4.0 1.4 237 chr2R 9510621 exon brp + chr2R 9510740 intron brp + chr2R 9510858 exon brp + chr2R_7_9510001 chr2R_9510001 RAL-774_125 784 chr2R 9541578 9541651 chr2R 9541705 9541773 13 124 2.5 6.5 4.5 2.4 195 chr2R 9541578 intergenic brp +,CG1888 - chr2R 9541676 intergenic brp +,CG1888 - chr2R 9541773 intergenic CG1888 -,brp + chr2R_13_9540001 chr2R_9540001 RAL-774_125 785 chr2R 9561803 9561848 chr2R 9561940 9561976 6 136 0.5 5.5 3.0 1.5 173 chr2R 9561803 3` UTR,intron CR45281 -,CG1809 + chr2R 9561890 3` UTR,intron CR45281 -,CG1809 + chr2R 9561976 3` UTR,intron CR45281 -,CG1809 + chr2R_6_9560001 chr2R_9560001 RAL-774_125 786 chr2R 9726586 9726633 chr2R 9734182 9734234 17.6 7 7600 3.0 6.5 4.8 1.2 7648 chr2R 9726586 intron sqa - chr2R 9730410 intron sqa - chr2R 9734234 intron sqa - chr2R_7_9730001 chr2R_9730001 RAL-774_125 787 chr2R 9862724 9862788 chr2R 9862845 9862914 21 120 4.5 4.0 4.2 4.0 190 chr2R 9862724 intergenic not near genes chr2R 9862819 intergenic not near genes chr2R 9862914 intergenic not near genes chr2R_21_9860001 chr2R_9860001 RAL-774_125 788 chr2R 9945411 9945457 chr2R 9945652 9945703 BS 8 242 3.0 4.0 3.5 1.8 292 chr2R 9945411 intron Mef2 - chr2R 9945557 intron Mef2 - chr2R 9945703 intron Mef2 - chr2R_8_9945001 chr2R_9945001 RAL-774_125 789 chr2R 9998021 9998088 chr2R 9998165 9998232 4 144 3.0 2.5 2.8 1.1 211 chr2R 9998021 intron Pka-R2 - chr2R 9998126 intron Pka-R2 - chr2R 9998232 intron Pka-R2 - chr2R_4_9995001 chr2R_9995001 RAL-774_125 790 chr2R 10005508 10005582 chr2R 10005655 10005729 13 145 1.0 2.5 1.8 4.6 221 chr2R 10005508 intron Pka-R2 - chr2R 10005618 intron Pka-R2 - chr2R 10005729 intron Pka-R2 - chr2R_13_10005001 chr2R_10005001 RAL-774_125 791 chr2R 10005817 10005871 chr2R 10007017 10007070 1360 8 1196 5.0 4.5 4.8 1.4 1253 chr2R 10005817 intron Pka-R2 - chr2R 10006444 intron Pka-R2 - chr2R 10007070 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-774_125 792 chr2R 10008574 10008600 chr2R 10008692 10008738 4 128 0.5 0.5 0.5 2.7 164 chr2R 10008574 intron Pka-R2 - chr2R 10008656 intron Pka-R2 - chr2R 10008738 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-774_125 793 chr2R 10044077 10044144 chr2R 10044381 10044448 15 299 5.0 6.0 5.5 2.3 371 chr2R 10044077 intron,5` UTR oys -,CR44295 + chr2R 10044262 intron,5` UTR oys -,CR44295 + chr2R 10044448 intron,5` UTR oys -,CR44295 + chr2R_15_10040001 chr2R_10040001 RAL-774_125 794 chr2R 10086874 10086933 chr2R 10087021 10087080 12 140 4.5 6.0 5.2 1.9 206 chr2R 10086874 intron,exon CG2269 +,sut4 - chr2R 10086977 intron,5` UTR CG2269 +,sut4 - chr2R 10087080 intron,5` UTR CG2269 +,sut4 - chr2R_12_10085001 chr2R_10085001 RAL-774_125 795 chr2R 10122691 10122734 chr2R 10122951 10122994 8 260 4.5 0.5 2.5 2.3 303 chr2R 10122691 intergenic Ccs - chr2R 10122842 intergenic Ccs - chr2R 10122994 intergenic Ccs - chr2R_8_10120001 chr2R_10120001 RAL-774_125 796 chr2R 10168311 10168347 chr2R 10168433 10168462 4 120 3.5 3.0 3.2 1.0 151 chr2R 10168311 intron KCNQ - chr2R 10168386 intron KCNQ - chr2R 10168462 intron KCNQ - chr2R_4_10165001 chr2R_10165001 RAL-774_125 797 chr2R 10171080 10171143 chr2R 10171206 10171236 8 126 1.0 6.5 3.8 1.7 156 chr2R 10171080 intron KCNQ - chr2R 10171158 intron KCNQ - chr2R 10171236 intron KCNQ - chr2R_8_10170001 chr2R_10170001 RAL-774_125 798 chr2R 10176078 10176152 chr2R 10176202 10176281 14 123 3.0 4.5 3.8 2.9 203 chr2R 10176078 intron KCNQ - chr2R 10176180 intron KCNQ - chr2R 10176281 intron KCNQ - chr2R_14_10175001 chr2R_10175001 RAL-774_125 799 chr2R 10176839 10176910 chr2R 10186056 10186127 roo 7 9217 4.0 1.0 2.5 2.0 9288 chr2R 10176839 intron KCNQ - chr2R 10181483 intron KCNQ - chr2R 10186127 intron KCNQ - chr2R_7_10180001 chr2R_10180001 RAL-774_125 800 chr2R 10203597 10203655 chr2R 10203732 10203790 10 135 3.0 3.0 3.0 2.5 193 chr2R 10203597 intergenic not near genes chr2R 10203694 intergenic not near genes chr2R 10203790 intergenic not near genes chr2R_10_10200001 chr2R_10200001 RAL-774_125 801 chr2R 10216151 10216216 chr2R 10216279 10216301 15 122 4.0 4.0 4.0 3.0 150 chr2R 10216151 intron,intron CG12912 -,Hr46 - chr2R 10216226 intron,intron CG12912 -,Hr46 - chr2R 10216301 intron,intron CG12912 -,Hr46 - chr2R_15_10215001 chr2R_10215001 RAL-774_125 802 chr2R 10225702 10225739 chr2R 10225819 10225871 6 128 4.0 3.5 3.8 1.2 169 chr2R 10225702 intron,intron CG12912 -,Hr46 - chr2R 10225786 intron,intron CG12912 -,Hr46 - chr2R 10225871 intron,intron CG12912 -,Hr46 - chr2R_6_10225001 chr2R_10225001 RAL-774_125 803 chr2R 10274771 10274805 chr2R 10274897 10274931 5 126 11.5 1.5 6.5 0.7 160 chr2R 10274771 intron CAP + chr2R 10274851 intron CAP + chr2R 10274931 intron CAP + chr2R_5_10270001 chr2R_10270001 RAL-774_125 804 chr2R 10313299 10313341 chr2R 10313437 10313459 7 134 0.5 1.0 0.8 3.9 160 chr2R 10313299 intergenic not near genes chr2R 10313379 intergenic not near genes chr2R 10313459 intergenic Ndg + chr2R_7_10310001 chr2R_10310001 RAL-774_125 805 chr2R 10322033 10322076 chr2R 10322165 10322208 4 132 2.5 7.5 5.0 0.7 175 chr2R 10322033 3` UTR Ndg + chr2R 10322120 intergenic Ndg + chr2R 10322208 intergenic Ndg + chr2R_4_10320001 chr2R_10320001 RAL-774_125 806 chr2R 10352632 10352695 chr2R 10352754 10352821 16 124 6.0 4.0 5.0 2.7 189 chr2R 10352632 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352821 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_16_10350001 chr2R_10350001 RAL-774_125 807 chr2R 10387982 10388000 chr2R 10388104 10388142 5 133 1.0 4.5 2.8 1.3 160 chr2R 10387982 intron CG42732 - chr2R 10388062 intron CG42732 - chr2R 10388142 intron CG42732 - chr2R_5_10385001 chr2R_10385001 RAL-774_125 808 chr2R 10411764 10411822 chr2R 10411896 10411954 7 131 4.0 8.0 6.0 1.0 190 chr2R 10411764 intron CG42732 - chr2R 10411859 intron CG42732 - chr2R 10411954 intron CG42732 - chr2R_7_10410001 chr2R_10410001 RAL-774_125 809 chr2R 10428978 10429041 chr2R 10429100 10429137 10 121 5.0 1.5 3.2 2.4 159 chr2R 10428978 intergenic not near genes chr2R 10429058 intergenic not near genes chr2R 10429137 intergenic not near genes chr2R_10_10425001 chr2R_10425001 RAL-774_125 810 chr2R 10468982 10469052 chr2R 10469148 10469213 12 166 1.0 2.0 1.5 4.8 231 chr2R 10468982 intron CG11777 + chr2R 10469098 intron CG11777 + chr2R 10469213 exon CG11777 + chr2R_12_10465001 chr2R_10465001 RAL-774_125 811 chr2R 10548122 10548131 chr2R 10548215 10548237 4 98 1.5 8.5 5.0 0.7 115 chr2R 10548122 intergenic not near genes chr2R 10548180 intergenic not near genes chr2R 10548237 intergenic not near genes chr2R_4_10545001 chr2R_10545001 RAL-774_125 812 chr2R 10577414 10577491 chr2R 10577549 10577626 7 133 1.5 4.5 3.0 1.8 212 chr2R 10577414 intron psq + chr2R 10577520 intron psq + chr2R 10577626 intron psq + chr2R_7_10575001 chr2R_10575001 RAL-774_125 813 chr2R 10621192 10621264 chr2R 10621357 10621413 14 161 2.5 6.0 4.2 2.7 221 chr2R 10621192 intron CG11883 + chr2R 10621302 intron CG11883 + chr2R 10621413 intron CG11883 + chr2R_14_10620001 chr2R_10620001 RAL-774_125 814 chr2R 10644019 10644055 chr2R 10644147 10644178 6 127 10.0 0.0 5.0 1.0 159 chr2R 10644019 intron Git - chr2R 10644098 intron Git - chr2R 10644178 intron Git - chr2R_6_10640001 chr2R_10640001 RAL-774_125 815 chr2R 10652214 10652249 chr2R 10652363 10652417 11 161 4.0 6.0 5.0 1.8 203 chr2R 10652214 intergenic not near genes chr2R 10652316 intergenic not near genes chr2R 10652417 intergenic not near genes chr2R_11_10650001 chr2R_10650001 RAL-774_125 816 chr2R 10675344 10675373 chr2R 10675475 10675504 5 131 5.5 3.0 4.2 1.0 160 chr2R 10675344 intron stan + chr2R 10675424 intron stan + chr2R 10675504 intron stan + chr2R_5_10675001 chr2R_10675001 RAL-774_125 817 chr2R 10770969 10771009 chr2R 10771100 10771119 5 123 4.0 6.5 5.2 0.8 150 chr2R 10770969 intron CG33144 - chr2R 10771044 intron CG33144 - chr2R 10771119 intron CG33144 - chr2R_5_10770001 chr2R_10770001 RAL-774_125 818 chr2R 10781368 10781427 chr2R 10781757 10781818 14 399 5.0 3.0 4.0 2.8 450 chr2R 10781368 intron CG33144 - chr2R 10781593 intron CG33144 - chr2R 10781818 intron CG33144 - chr2R_14_10780001 chr2R_10780001 RAL-774_125 819 chr2R 10790104 10790162 chr2R 10790237 10790290 13 135 8.0 7.0 7.5 1.5 186 chr2R 10790104 intron CG33144 - chr2R 10790197 intron CG33144 - chr2R 10790290 intron CG33144 - chr2R_13_10790001 chr2R_10790001 RAL-774_125 820 chr2R 10848272 10848316 chr2R 10848425 10848457 4 150 3.5 2.5 3.0 1.0 185 chr2R 10848272 intron CG30015 - chr2R 10848364 intron CG30015 - chr2R 10848457 exon CG30015 - chr2R_4_10845001 chr2R_10845001 RAL-774_125 821 chr2R 10860505 10860518 chr2R 10860631 10860641 7 125 3.5 1.0 2.2 2.2 136 chr2R 10860505 intron CG30015 - chr2R 10860573 intron CG30015 - chr2R 10860641 intron CG30015 - chr2R_7_10860001 chr2R_10860001 RAL-774_125 822 chr2R 10930914 10930934 chr2R 10931101 10931124 5 195 7.0 3.5 5.2 0.8 210 chr2R 10930914 intergenic not near genes chr2R 10931019 intergenic not near genes chr2R 10931124 intergenic not near genes chr2R_5_10930001 chr2R_10930001 RAL-774_125 823 chr2R 10930935 10930951 chr2R 10931096 10931172 5 176 6.0 3.5 4.8 0.9 237 chr2R 10930935 intergenic not near genes chr2R 10931054 intergenic not near genes chr2R 10931172 intergenic not near genes chr2R_5_10930001 chr2R_10930001 RAL-774_125 824 chr2R 10948016 10948052 chr2R 10955607 10955647 17.6 14 7595 0.5 6.5 3.5 3.1 7631 chr2R 10948016 intergenic not near genes chr2R 10951832 intergenic not near genes chr2R 10955647 intergenic not near genes chr2R_14_10950001 chr2R_10950001 RAL-774_125 825 chr2R 10959047 10959101 chr2R 10959176 10959223 7 126 0.0 5.0 2.5 2.0 176 chr2R 10959047 intergenic not near genes chr2R 10959135 intergenic not near genes chr2R 10959223 intergenic not near genes chr2R_7_10955001 chr2R_10955001 RAL-774_125 826 chr2R 11009774 11009847 chr2R 11018998 11019043 roo 10 9217 4.5 7.0 5.8 1.5 9269 chr2R 11009774 intron luna - chr2R 11014408 intron luna - chr2R 11019043 intron luna - chr2R_10_11010001 chr2R_11010001 RAL-774_125 827 chr2R 11019837 11019902 chr2R 11024953 11024995 jockey 11 5108 5.5 5.5 5.5 1.7 5158 chr2R 11019837 intron luna - chr2R 11022416 intron luna - chr2R 11024995 intron luna - chr2R_11_11020001 chr2R_11020001 RAL-774_125 828 chr2R 11055921 11055939 chr2R 11056266 11056302 5 357 4.0 5.0 4.5 0.9 381 chr2R 11055921 intron luna - chr2R 11056112 intron luna - chr2R 11056302 intron luna - chr2R_5_11055001 chr2R_11055001 RAL-774_125 829 chr2R 11154153 11154233 chr2R 11154322 11154403 9 168 2.0 4.0 3.0 2.2 250 chr2R 11154153 intron CG13229 - chr2R 11154278 intron CG13229 - chr2R 11154403 intron CG13229 - chr2R_9_11150001 chr2R_11150001 RAL-774_125 830 chr2R 11161613 11161655 chr2R 11161802 11161845 9 187 6.5 1.5 4.0 1.8 232 chr2R 11161613 intron,intron CG13229 -,shn + chr2R 11161729 intron,intron CG13229 -,shn + chr2R 11161845 intron,intron CG13229 -,shn + chr2R_9_11160001 chr2R_11160001 RAL-774_125 831 chr2R 11163620 11163679 chr2R 11163787 11163842 11 165 6.0 0.0 3.0 2.8 222 chr2R 11163620 intron,intron CG13229 -,shn + chr2R 11163731 intron,intron CG13229 -,shn + chr2R 11163842 intron,intron CG13229 -,shn + chr2R_11_11160001 chr2R_11160001 RAL-774_125 832 chr2R 11207783 11207838 chr2R 11208020 11208074 BS 11 235 8.5 4.5 6.5 1.5 291 chr2R 11207783 intron shn + chr2R 11207928 intron shn + chr2R 11208074 intron shn + chr2R_11_11205001 chr2R_11205001 RAL-774_125 833 chr2R 11344113 11344159 chr2R 11344254 11344301 4 144 0.0 2.0 1.0 2.0 188 chr2R 11344113 intergenic alphaTry - chr2R 11344207 intergenic alphaTry - chr2R 11344301 3` UTR alphaTry - chr2R_4_11340001 chr2R_11340001 RAL-774_125 834 chr2R 11367991 11368038 chr2R 11368117 11368164 5 126 4.5 1.5 3.0 1.2 173 chr2R 11367991 intron CG13204 + chr2R 11368078 intron CG13204 + chr2R 11368164 intron CG13204 + chr2R_5_11365001 chr2R_11365001 RAL-774_125 835 chr2R 11404758 11404798 chr2R 11404885 11404934 7 135 4.5 4.5 4.5 1.3 176 chr2R 11404758 intergenic not near genes chr2R 11404846 intergenic not near genes chr2R 11404934 intergenic not near genes chr2R_7_11400001 chr2R_11400001 RAL-774_125 836 chr2R 11415488 11415545 chr2R 11418687 11418744 opus 11 3191 1.0 9.5 5.2 1.8 3256 chr2R 11415488 intron Drip - chr2R 11417116 intron Drip - chr2R 11418744 intron Drip - chr2R_11_11415001 chr2R_11415001 RAL-774_125 837 chr2R 11425673 11425685 chr2R 11425779 11425815 5 123 0.5 8.0 4.2 1.0 142 chr2R 11425673 intron Drip - chr2R 11425744 intron Drip - chr2R 11425815 intron Drip - chr2R_5_11425001 chr2R_11425001 RAL-774_125 838 chr2R 11472614 11472668 chr2R 11473861 11473915 pogo 10 1246 7.5 7.0 7.2 1.2 1301 chr2R 11472614 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473915 intergenic not near genes chr2R_10_11470001 chr2R_11470001 RAL-774_125 839 chr2R 11494564 11494629 chr2R 11494703 11494739 13 133 2.5 6.0 4.2 2.5 175 chr2R 11494564 intron inv + chr2R 11494652 intron inv + chr2R 11494739 intron inv + chr2R_13_11490001 chr2R_11490001 RAL-774_125 840 chr2R 11612540 11612599 chr2R 11612668 11612727 14 126 13.0 8.0 10.5 1.2 187 chr2R 11612540 intron tou - chr2R 11612634 intron tou - chr2R 11612727 intron tou - chr2R_14_11610001 chr2R_11610001 RAL-774_125 841 chr2R 11614597 11614791 chr2R 11614735 11614924 13 136 2.0 2.0 2.0 4.3 327 chr2R 11614597 intron tou - chr2R 11614760 intron tou - chr2R 11614924 intron tou - chr2R_13_11610001 chr2R_11610001 RAL-774_125 842 chr2R 11632531 11632577 chr2R 11632626 11632634 13 102 2.5 4.5 3.5 2.9 103 chr2R 11632531 intron CG9005 - chr2R 11632582 intron CG9005 - chr2R 11632634 intron CG9005 - chr2R_13_11630001 chr2R_11630001 RAL-774_125 843 chr2R 11636377 11636437 chr2R 11636484 11636550 12 108 4.0 4.0 4.0 2.4 173 chr2R 11636377 intron CG9005 - chr2R 11636464 intron CG9005 - chr2R 11636550 intron CG9005 - chr2R_12_11635001 chr2R_11635001 RAL-774_125 844 chr2R 11660351 11660387 chr2R 11660518 11660548 10 163 1.0 4.5 2.8 2.6 197 chr2R 11660351 intron Roc2 - chr2R 11660450 intron Roc2 - chr2R 11660548 intron Roc2 - chr2R_10_11660001 chr2R_11660001 RAL-774_125 845 chr2R 11667339 11667398 chr2R 11667483 11667542 8 142 3.0 3.5 3.2 1.9 203 chr2R 11667339 intron,intron Roc2 -,Tret1-1 + chr2R 11667440 intron,intron Roc2 -,Tret1-1 + chr2R 11667542 intron,intron Roc2 -,Tret1-1 + chr2R_8_11665001 chr2R_11665001 RAL-774_125 846 chr2R 11724118 11724175 chr2R 11724247 11724313 5 134 4.0 3.5 3.8 1.0 195 chr2R 11724118 intron pyr + chr2R 11724216 intron pyr + chr2R 11724313 exon pyr + chr2R_5_11720001 chr2R_11720001 RAL-774_125 847 chr2R 11775904 11775961 chr2R 11776023 11776087 6 125 3.0 3.0 3.0 1.5 183 chr2R 11775904 intron ths + chr2R 11775996 intron ths + chr2R 11776087 intron ths + chr2R_6_11775001 chr2R_11775001 RAL-774_125 848 chr2R 11928642 11928707 chr2R 11928770 11928835 8 127 0.0 3.0 1.5 3.2 193 chr2R 11928642 intergenic not near genes chr2R 11928738 intergenic not near genes chr2R 11928835 intergenic CR44312 - chr2R_8_11925001 chr2R_11925001 RAL-774_125 849 chr2R 11945441 11945514 chr2R 11945777 11945806 8 306 3.0 3.0 3.0 2.0 365 chr2R 11945441 intron CG13188 + chr2R 11945624 intron CG13188 + chr2R 11945806 intron CG13188 + chr2R_8_11945001 chr2R_11945001 RAL-774_125 850 chr2R 12096796 12096816 chr2R 12097291 12097318 6 497 8.0 3.0 5.5 0.9 522 chr2R 12096796 intron jeb - chr2R 12097057 intron jeb - chr2R 12097318 intron jeb - chr2R_6_12095001 chr2R_12095001 RAL-774_125 851 chr2R 12096823 12096846 chr2R 12097289 12097338 5 492 5.0 3.0 4.0 1.0 515 chr2R 12096823 intron jeb - chr2R 12097080 intron jeb - chr2R 12097338 intron jeb - chr2R_5_12095001 chr2R_12095001 RAL-774_125 852 chr2R 12185962 12186037 chr2R 12186101 12186140 37 136 5.0 8.5 6.8 4.7 178 chr2R 12185962 intron Cyp6g1 + chr2R 12186051 intron Cyp6g1 + chr2R 12186140 intron Cyp6g1 + chr2R_37_12185001 chr2R_12185001 RAL-774_125 853 chr2R 12185223 12185263 chr2R 12188105 12188138 16 2878 26.0 130.5 78.2 0.2 2915 chr2R 12185223 3` UTR,exon CG13175 +,CG33964 + chr2R 12186680 exon Cyp6g1 + chr2R 12188138 3` UTR Cyp6g1 + chr2R_16_12185001 chr2R_12185001 RAL-774_125 854 chr2R 12187478 12187507 chr2R 12190060 12190121 43 2584 87.0 85.0 86.0 0.5 2643 chr2R 12187478 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190121 exon Cyp6g2 - chr2R_43_12185001 chr2R_12185001 RAL-774_125 855 chr2R 12217525 12217596 chr2R 12217656 12217727 11 125 2.5 6.5 4.5 2.0 202 chr2R 12217525 intergenic not near genes chr2R 12217626 intergenic not near genes chr2R 12217727 intergenic not near genes chr2R_11_12215001 chr2R_12215001 RAL-774_125 856 chr2R 12228354 12228358 chr2R 12228523 12228527 4 169 0.0 3.5 1.8 1.4 173 chr2R 12228354 intron CG8854 - chr2R 12228440 intron CG8854 - chr2R 12228527 intron CG8854 - chr2R_4_12225001 chr2R_12225001 RAL-774_125 857 chr2R 12228359 12228400 chr2R 12228520 12228569 5 167 0.0 3.0 1.5 2.0 210 chr2R 12228359 intron CG8854 - chr2R 12228464 intron CG8854 - chr2R 12228569 intron CG8854 - chr2R_5_12225001 chr2R_12225001 RAL-774_125 858 chr2R 12501649 12501673 chr2R 12503861 12503871 Rt1c 5 2206 6.5 6.0 6.2 0.7 2222 chr2R 12501649 intron fdl - chr2R 12502760 intron fdl - chr2R 12503871 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-774_125 859 chr2R 12501691 12501722 chr2R 12503851 12503898 Rt1c 4 2179 3.0 4.0 3.5 0.9 2207 chr2R 12501691 intron fdl - chr2R 12502794 intron fdl - chr2R 12503898 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-774_125 860 chr2R 12602817 12602830 chr2R 12602945 12602964 4 132 0.0 10.0 5.0 0.7 147 chr2R 12602817 intron Amph + chr2R 12602890 intron Amph + chr2R 12602964 intron Amph + chr2R_4_12600001 chr2R_12600001 RAL-774_125 861 chr2R 12665979 12666055 chr2R 12666117 12666193 9 136 4.5 4.5 4.5 1.6 214 chr2R 12665979 intron nemy - chr2R 12666086 intron nemy - chr2R 12666193 intron nemy - chr2R_9_12665001 chr2R_12665001 RAL-774_125 862 chr2R 12702275 12702349 chr2R 12702406 12702466 8 122 3.0 2.5 2.8 2.1 191 chr2R 12702275 intergenic not near genes chr2R 12702370 intergenic not near genes chr2R 12702466 intergenic not near genes chr2R_8_12700001 chr2R_12700001 RAL-774_125 863 chr2R 12707469 12707538 chr2R 12715885 12715954 roo 6 8416 5.5 2.0 3.8 1.2 8485 chr2R 12707469 intron CG42663 + chr2R 12711712 intron CG42663 + chr2R 12715954 intron CG42663 + chr2R_6_12710001 chr2R_12710001 RAL-774_125 864 chr2R 12726280 12726350 chr2R 12726422 12726482 20 140 5.0 7.5 6.2 2.8 202 chr2R 12726280 intron CG42663 + chr2R 12726381 intron CG42663 + chr2R 12726482 intron CG42663 + chr2R_20_12725001 chr2R_12725001 RAL-774_125 865 chr2R 12726569 12726622 chr2R 12726726 12726785 8 154 4.0 0.0 2.0 2.7 216 chr2R 12726569 intron CG42663 + chr2R 12726677 intron CG42663 + chr2R 12726785 intron CG42663 + chr2R_8_12725001 chr2R_12725001 RAL-774_125 866 chr2R 12747913 12747991 chr2R 12748040 12748111 13 120 1.5 4.0 2.8 3.4 198 chr2R 12747913 intron CG42663 + chr2R 12748012 intron CG42663 + chr2R 12748111 intron CG42663 + chr2R_13_12745001 chr2R_12745001 RAL-774_125 867 chr2R 12748736 12748794 chr2R 12748874 12748932 8 136 0.5 2.5 1.5 3.2 196 chr2R 12748736 intron CG42663 + chr2R 12748834 intron CG42663 + chr2R 12748932 exon CG42663 + chr2R_8_12745001 chr2R_12745001 RAL-774_125 868 chr2R 12789285 12789321 chr2R 12797668 12797713 roo 9 8401 3.0 5.0 4.0 1.8 8428 chr2R 12789285 intron,3` UTR sca +,CR45137 - chr2R 12793499 intron,intron sca +,CR45137 - chr2R 12797713 intron,3` UTR sca +,CR45137 - chr2R_9_12790001 chr2R_12790001 RAL-774_125 869 chr2R 12819403 12819468 chr2R 12824522 12824587 jockey 13 5116 3.5 4.0 3.8 2.7 5184 chr2R 12819403 intergenic not near genes chr2R 12821995 intergenic not near genes chr2R 12824587 intergenic not near genes chr2R_13_12820001 chr2R_12820001 RAL-774_125 870 chr2R 12855551 12855626 chr2R 12855680 12855755 16 126 6.0 3.0 4.5 2.9 204 chr2R 12855551 intron CG17574 - chr2R 12855653 intron CG17574 - chr2R 12855755 intron CG17574 - chr2R_16_12855001 chr2R_12855001 RAL-774_125 871 chr2R 12897413 12897474 chr2R 12897554 12897589 4 134 2.5 1.0 1.8 1.4 176 chr2R 12897413 intron vg + chr2R 12897501 intron vg + chr2R 12897589 intron vg + chr2R_4_12895001 chr2R_12895001 RAL-774_125 872 chr2R 12915779 12915843 chr2R 12915924 12915988 11 136 4.5 7.0 5.8 1.6 209 chr2R 12915779 intergenic NAT1 + chr2R 12915884 intergenic NAT1 + chr2R 12915988 intergenic NAT1 + chr2R_11_12915001 chr2R_12915001 RAL-774_125 873 chr2R 13089720 13089768 chr2R 13089864 13089923 13 149 4.0 2.5 3.2 3.1 203 chr2R 13089720 intergenic not near genes chr2R 13089822 intergenic not near genes chr2R 13089923 intergenic not near genes chr2R_13_13085001 chr2R_13085001 RAL-774_125 874 chr2R 13136798 13136853 chr2R 13141644 13141694 Doc 10 4843 3.0 3.0 3.0 2.5 4896 chr2R 13136798 exon Cap-G + chr2R 13139246 intron Cap-G + chr2R 13141694 intron Cap-G + chr2R_10_13135001 chr2R_13135001 RAL-774_125 875 chr2R 13167401 13167455 chr2R 13167540 13167605 7 144 4.0 0.0 2.0 2.3 204 chr2R 13167401 intron GLaz - chr2R 13167503 intron GLaz - chr2R 13167605 intron GLaz - chr2R_7_13165001 chr2R_13165001 RAL-774_125 876 chr2R 13194831 13194852 chr2R 13194946 13194946 4 112 5.5 3.5 4.5 0.7 115 chr2R 13194831 intergenic not near genes chr2R 13194888 intergenic not near genes chr2R 13194946 intergenic not near genes chr2R_4_13190001 chr2R_13190001 RAL-774_125 877 chr2R 13220488 13220547 chr2R 13220616 13220691 11 135 0.0 3.5 1.8 3.9 203 chr2R 13220488 intron CG17059 + chr2R 13220590 intron CG17059 + chr2R 13220691 intron CG17059 + chr2R_11_13220001 chr2R_13220001 RAL-774_125 878 chr2R 13241021 13241089 chr2R 13241167 13241220 11 128 1.0 7.0 4.0 2.2 199 chr2R 13241021 intergenic GstE14 + chr2R 13241120 intergenic GstE14 + chr2R 13241220 intergenic GstE14 + chr2R_11_13240001 chr2R_13240001 RAL-774_125 879 chr2R 13305453 13305508 chr2R 13305585 13305617 11 125 7.0 5.0 6.0 1.6 164 chr2R 13305453 intergenic not near genes chr2R 13305535 intergenic not near genes chr2R 13305617 intergenic not near genes chr2R_11_13305001 chr2R_13305001 RAL-774_125 880 chr2R 13342266 13342280 chr2R 13342384 13342431 4 143 1.5 2.5 2.0 1.3 165 chr2R 13342266 intron CR44206 - chr2R 13342348 intron CR44206 - chr2R 13342431 intron CR44206 - chr2R_4_13340001 chr2R_13340001 RAL-774_125 881 chr2R 13342281 13342293 chr2R 13342382 13342442 4 132 2.0 2.5 2.2 1.2 161 chr2R 13342281 intron CR44206 - chr2R 13342362 intron CR44206 - chr2R 13342442 intron CR44206 - chr2R_4_13340001 chr2R_13340001 RAL-774_125 882 chr2R 13348975 13349026 chr2R 13349122 13349178 6 148 5.5 3.0 4.2 1.2 203 chr2R 13348975 intron CR44206 - chr2R 13349076 intron CR44206 - chr2R 13349178 intron CR44206 - chr2R_6_13345001 chr2R_13345001 RAL-774_125 883 chr2R 13368741 13368782 chr2R 13368902 13368943 14 160 3.5 5.0 4.2 2.7 202 chr2R 13368741 intergenic not near genes chr2R 13368842 intergenic not near genes chr2R 13368943 intergenic not near genes chr2R_14_13365001 chr2R_13365001 RAL-774_125 884 chr2R 13376619 13376639 chr2R 13376776 13376795 5 158 1.0 1.0 1.0 2.5 176 chr2R 13376619 intron CG10814 - chr2R 13376707 intron CG10814 - chr2R 13376795 exon CG10814 - chr2R_5_13375001 chr2R_13375001 RAL-774_125 885 chr2R 13403880 13403918 chr2R 13404010 13404053 7 131 4.0 0.5 2.2 2.2 173 chr2R 13403880 intergenic not near genes chr2R 13403966 intergenic not near genes chr2R 13404053 intergenic not near genes chr2R_7_13400001 chr2R_13400001 RAL-774_125 886 chr2R 13431448 13431519 chr2R 13431577 13431648 11 127 3.0 2.5 2.8 2.9 200 chr2R 13431448 intron CG42321 - chr2R 13431548 intron CG42321 - chr2R 13431648 intron CG42321 - chr2R_11_13430001 chr2R_13430001 RAL-774_125 887 chr2R 13439082 13439135 chr2R 13439270 13439323 16 186 5.0 4.5 4.8 2.8 241 chr2R 13439082 intergenic CG42321 -,cnn - chr2R 13439202 intergenic cnn -,CG42321 - chr2R 13439323 3` UTR cnn - chr2R_16_13435001 chr2R_13435001 RAL-774_125 888 chr2R 13532474 13532539 chr2R 13532640 13532705 7 166 2.5 2.0 2.2 2.2 231 chr2R 13532474 intron Vmat - chr2R 13532590 intron Vmat - chr2R 13532705 intron Vmat - chr2R_7_13530001 chr2R_13530001 RAL-774_125 889 chr2R 13568131 13568190 chr2R 13568259 13568314 6 128 3.0 0.5 1.8 2.1 183 chr2R 13568131 intergenic not near genes chr2R 13568222 intergenic not near genes chr2R 13568314 intergenic not near genes chr2R_6_13565001 chr2R_13565001 RAL-774_125 890 chr2R 13580454 13580519 chr2R 13580854 13580919 jockey 17 397 7.5 5.0 6.2 2.4 465 chr2R 13580454 3` UTR CG6191 - chr2R 13580686 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580919 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_17_13580001 chr2R_13580001 RAL-774_125 891 chr2R 13622162 13622188 chr2R 13622290 13622316 4 128 1.5 6.5 4.0 0.8 154 chr2R 13622162 intergenic not near genes chr2R 13622239 intergenic not near genes chr2R 13622316 intergenic not near genes chr2R_4_13620001 chr2R_13620001 RAL-774_125 892 chr2R 13632278 13632296 chr2R 13632416 13632424 4 134 8.5 6.5 7.5 0.5 146 chr2R 13632278 intron fas + chr2R 13632351 intron fas + chr2R 13632424 intron fas + chr2R_4_13630001 chr2R_13630001 RAL-774_125 893 chr2R 13684236 13684245 chr2R 13684356 13684373 4 126 6.5 1.0 3.8 0.8 137 chr2R 13684236 intron fas + chr2R 13684304 intron fas + chr2R 13684373 intron fas + chr2R_4_13680001 chr2R_13680001 RAL-774_125 894 chr2R 13709572 13709815 chr2R 13709699 13709958 7 134 8.5 4.5 6.5 0.9 386 chr2R 13709572 intron fas + chr2R 13709765 intron fas + chr2R 13709958 intron fas + chr2R_7_13705001 chr2R_13705001 RAL-774_125 895 chr2R 13721171 13721227 chr2R 13721293 13721349 9 119 5.5 3.5 4.5 1.6 178 chr2R 13721171 intron fas + chr2R 13721260 intron fas + chr2R 13721349 intron fas + chr2R_9_13720001 chr2R_13720001 RAL-774_125 896 chr2R 13728087 13728139 chr2R 13735789 13735846 opus 4 7704 5.5 1.0 3.2 1.0 7759 chr2R 13728087 intron fas + chr2R 13731966 intron fas + chr2R 13735846 intron fas + chr2R_4_13730001 chr2R_13730001 RAL-774_125 897 chr2R 13738860 13738932 chr2R 13739001 13739073 8 140 1.5 0.5 1.0 4.0 213 chr2R 13738860 intron fas + chr2R 13738966 intron fas + chr2R 13739073 intron fas + chr2R_8_13735001 chr2R_13735001 RAL-774_125 898 chr2R 13768942 13769002 chr2R 13769091 13769151 6 147 3.5 3.5 3.5 1.3 209 chr2R 13768942 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769151 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-774_125 899 chr2R 13861389 13861432 chr2R 13861519 13861562 14 129 5.5 6.0 5.8 2.1 173 chr2R 13861389 intron CG16935 - chr2R 13861476 intron CG16935 - chr2R 13861562 intron CG16935 - chr2R_14_13860001 chr2R_13860001 RAL-774_125 900 chr2R 13868857 13868925 chr2R 13868981 13869024 5 120 2.0 5.0 3.5 1.1 167 chr2R 13868857 intron shot - chr2R 13868940 intron shot - chr2R 13869024 intron shot - chr2R_5_13865001 chr2R_13865001 RAL-774_125 901 chr2R 13905550 13905590 chr2R 13907582 13907616 Rt1a 11 2029 3.0 2.0 2.5 3.1 2066 chr2R 13905550 intron shot - chr2R 13906583 intron shot - chr2R 13907616 intron shot - chr2R_11_13905001 chr2R_13905001 RAL-774_125 902 chr2R 13925828 13925889 chr2R 13926032 13926093 9 204 3.0 4.0 3.5 2.0 265 chr2R 13925828 intron shot - chr2R 13925960 intron shot - chr2R 13926093 intron shot - chr2R_9_13925001 chr2R_13925001 RAL-774_125 903 chr2R 13933386 13933444 chr2R 13933518 13933576 12 129 5.0 3.0 4.0 2.4 190 chr2R 13933386 intron shot - chr2R 13933481 intron shot - chr2R 13933576 intron shot - chr2R_12_13930001 chr2R_13930001 RAL-774_125 904 chr2R 13995229 13995235 chr2R 13995366 13995367 4 136 0.0 14.5 7.2 0.5 138 chr2R 13995229 intron mam + chr2R 13995298 intron mam + chr2R 13995367 intron mam + chr2R_4_13995001 chr2R_13995001 RAL-774_125 905 chr2R 14014967 14014999 chr2R 14015811 14015843 7 844 3.0 4.0 3.5 1.6 876 chr2R 14014967 intron mam + chr2R 14015405 intron mam + chr2R 14015843 intron mam + chr2R_7_14015001 chr2R_14015001 RAL-774_125 906 chr2R 14018116 14018181 chr2R 14018250 14018304 11 131 2.5 3.5 3.0 2.8 188 chr2R 14018116 intron mam + chr2R 14018210 intron mam + chr2R 14018304 intron mam + chr2R_11_14015001 chr2R_14015001 RAL-774_125 907 chr2R 14115730 14115799 chr2R 14115860 14115893 15 124 3.0 2.0 2.5 4.3 163 chr2R 14115730 intron Prosap - chr2R 14115812 intron Prosap - chr2R 14115893 intron Prosap - chr2R_15_14115001 chr2R_14115001 RAL-774_125 908 chr2R 14141916 14141943 chr2R 14142071 14142098 6 151 6.0 8.0 7.0 0.8 182 chr2R 14141916 intergenic not near genes chr2R 14142007 intergenic not near genes chr2R 14142098 intergenic not near genes chr2R_6_14140001 chr2R_14140001 RAL-774_125 909 chr2R 14142397 14142472 chr2R 14142537 14142612 13 140 3.5 4.0 3.8 2.7 215 chr2R 14142397 intergenic not near genes chr2R 14142504 intergenic not near genes chr2R 14142612 intergenic not near genes chr2R_13_14140001 chr2R_14140001 RAL-774_125 910 chr2R 14168327 14168391 chr2R 14168466 14168529 9 139 3.0 4.5 3.8 1.9 202 chr2R 14168327 intergenic CG18327 +,CG18324 + chr2R 14168428 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168529 intergenic CG18324 +,CG18327 +,CR44368 - chr2R_9_14165001 chr2R_14165001 RAL-774_125 911 chr2R 14285033 14285050 chr2R 14285153 14285183 4 128 0.0 4.5 2.2 1.2 150 chr2R 14285033 intron Ih + chr2R 14285108 intron Ih + chr2R 14285183 intron Ih + chr2R_4_14285001 chr2R_14285001 RAL-774_125 912 chr2R 14294802 14294855 chr2R 14294930 14294985 4 119 21.0 25.0 23.0 0.2 183 chr2R 14294802 intron Ih + chr2R 14294894 intron Ih + chr2R 14294985 intron Ih + chr2R_4_14290001 chr2R_14290001 RAL-774_125 913 chr2R 14308821 14308838 chr2R 14308950 14308977 7 137 10.5 15.0 12.8 0.5 156 chr2R 14308821 intron Shroom + chr2R 14308899 intron Shroom + chr2R 14308977 intron Shroom + chr2R_7_14305001 chr2R_14305001 RAL-774_125 914 chr2R 14357505 14357544 chr2R 14357645 14357684 4 138 16.5 15.5 16.0 0.2 179 chr2R 14357505 intergenic CG8617 -,Arc1 - chr2R 14357594 intergenic CG8617 -,Arc1 - chr2R 14357684 intergenic Arc1 -,CG8617 - chr2R_4_14355001 chr2R_14355001 RAL-774_125 915 chr2R 14377322 14377357 chr2R 14377422 14377486 5 116 4.5 5.5 5.0 0.8 164 chr2R 14377322 intergenic not near genes chr2R 14377404 intergenic not near genes chr2R 14377486 intergenic not near genes chr2R_5_14375001 chr2R_14375001 RAL-774_125 916 chr2R 14388009 14388059 chr2R 14388138 14388188 12 125 6.5 12.5 9.5 1.1 179 chr2R 14388009 intergenic not near genes chr2R 14388098 intergenic not near genes chr2R 14388188 intergenic not near genes chr2R_12_14385001 chr2R_14385001 RAL-774_125 917 chr2R 14393837 14393896 chr2R 14393956 14394020 15 127 11.0 11.5 11.2 1.2 183 chr2R 14393837 intergenic not near genes chr2R 14393928 intergenic not near genes chr2R 14394020 intergenic not near genes chr2R_15_14390001 chr2R_14390001 RAL-774_125 918 chr2R 14425582 14425643 chr2R 14425762 14425784 11 179 4.0 3.0 3.5 2.4 202 chr2R 14425582 intergenic not near genes chr2R 14425683 intergenic not near genes chr2R 14425784 intergenic not near genes chr2R_11_14425001 chr2R_14425001 RAL-774_125 919 chr2R 14467273 14467326 chr2R 14476481 14476534 roo 7 9206 2.0 5.5 3.8 1.5 9261 chr2R 14467273 intergenic not near genes chr2R 14471904 intergenic not near genes chr2R 14476534 5` UTR CR44462 + chr2R_7_14470001 chr2R_14470001 RAL-774_125 920 chr2R 14514441 14514495 chr2R 14514584 14514638 5 143 3.5 3.5 3.5 1.1 197 chr2R 14514441 intron,exon Cpr51A -,CG30197 + chr2R 14514540 intron,intron Cpr51A -,CG30197 + chr2R 14514638 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 RAL-774_125 921 chr2R 14530330 14530373 chr2R 14530468 14530507 4 138 7.5 3.5 5.5 0.6 177 chr2R 14530330 intron ttv + chr2R 14530418 intron ttv + chr2R 14530507 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-774_125 922 chr2R 14565525 14565564 chr2R 14565652 14565691 4 127 12.5 7.5 10.0 0.4 166 chr2R 14565525 intron ttv + chr2R 14565608 intron ttv + chr2R 14565691 intron ttv + chr2R_4_14565001 chr2R_14565001 RAL-774_125 923 chr2R 14610201 14610254 chr2R 14610343 14610366 7 132 18.0 13.0 15.5 0.4 165 chr2R 14610201 exon Su(var)2-HP2 - chr2R 14610284 exon Su(var)2-HP2 - chr2R 14610366 exon Su(var)2-HP2 - chr2R_7_14610001 chr2R_14610001 RAL-774_125 924 chr2R 14679410 14679467 chr2R 14679653 14679710 6 243 10.0 5.0 7.5 0.7 300 chr2R 14679410 intron mspo - chr2R 14679560 intron mspo - chr2R 14679710 intron mspo - chr2R_6_14675001 chr2R_14675001 RAL-774_125 925 chr2R 14681858 14681917 chr2R 14681984 14682046 9 132 5.5 7.0 6.2 1.2 188 chr2R 14681858 intron mspo - chr2R 14681952 intron mspo - chr2R 14682046 intron mspo - chr2R_9_14680001 chr2R_14680001 RAL-774_125 926 chr2R 14702284 14702351 chr2R 14702416 14702477 5 128 3.5 3.5 3.5 1.1 193 chr2R 14702284 intron mspo - chr2R 14702380 intron mspo - chr2R 14702477 intron mspo - chr2R_5_14700001 chr2R_14700001 RAL-774_125 927 chr2R 14722262 14722297 chr2R 14722415 14722441 4 150 7.5 7.0 7.2 0.5 179 chr2R 14722262 intergenic not near genes chr2R 14722352 intergenic not near genes chr2R 14722441 intergenic not near genes chr2R_4_14720001 chr2R_14720001 RAL-774_125 928 chr2R 14728167 14728211 chr2R 14728300 14728344 7 131 13.5 12.5 13.0 0.5 177 chr2R 14728167 intergenic not near genes chr2R 14728256 intergenic not near genes chr2R 14728344 intergenic not near genes chr2R_7_14725001 chr2R_14725001 RAL-774_125 929 chr2R 14797550 14797612 chr2R 14797702 14797722 6 137 3.5 6.0 4.8 1.0 172 chr2R 14797550 intron kn - chr2R 14797636 intron kn - chr2R 14797722 intron kn - chr2R_6_14795001 chr2R_14795001 RAL-774_125 930 chr2R 14826353 14826384 chr2R 14826507 14826518 5 150 2.5 2.0 2.2 1.6 165 chr2R 14826353 intergenic not near genes chr2R 14826436 intergenic not near genes chr2R 14826518 intergenic not near genes chr2R_5_14825001 chr2R_14825001 RAL-774_125 931 chr2R 14842344 14842392 chr2R 14842490 14842537 8 145 6.0 2.0 4.0 1.6 193 chr2R 14842344 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842537 intergenic NaPi-T - chr2R_8_14840001 chr2R_14840001 RAL-774_125 932 chr2R 14870764 14870810 chr2R 14870899 14870945 8 134 11.0 15.0 13.0 0.6 181 chr2R 14870764 intron Inr-a - chr2R 14870854 intron Inr-a - chr2R 14870945 5` UTR Inr-a - chr2R_8_14870001 chr2R_14870001 RAL-774_125 933 chr2R 14889175 14889241 chr2R 14897828 14897888 Max-element 10 8650 6.0 0.0 3.0 2.5 8713 chr2R 14889175 intergenic Cyp6a8 - chr2R 14893532 intergenic not near genes chr2R 14897888 intergenic not near genes chr2R_10_14890001 chr2R_14890001 RAL-774_125 934 chr2R 14911651 14911722 chr2R 14911824 14911895 13 172 2.5 5.0 3.8 2.7 244 chr2R 14911651 intron CG10249 - chr2R 14911773 intron CG10249 - chr2R 14911895 intron CG10249 - chr2R_13_14910001 chr2R_14910001 RAL-774_125 935 chr2R 14919013 14919150 chr2R 14919136 14919309 6 143 1.5 3.5 2.5 1.7 296 chr2R 14919013 intron CG10249 - chr2R 14919161 intron CG10249 - chr2R 14919309 intron CG10249 - chr2R_6_14915001 chr2R_14915001 RAL-774_125 936 chr2R 14922099 14922171 chr2R 14922225 14922276 14 122 11.5 11.0 11.2 1.1 177 chr2R 14922099 intron CG10249 - chr2R 14922188 intron CG10249 - chr2R 14922276 intron CG10249 - chr2R_14_14920001 chr2R_14920001 RAL-774_125 937 chr2R 14979722 14979787 chr2R 14979848 14979903 17 123 10.5 5.5 8.0 1.9 181 chr2R 14979722 3` UTR ckn + chr2R 14979812 3` UTR ckn + chr2R 14979903 3` UTR ckn + chr2R_17_14975001 chr2R_14975001 RAL-774_125 938 chr2R 14987348 14987408 chr2R 14987542 14987602 14 192 5.5 5.5 5.5 2.2 254 chr2R 14987348 intron pcs + chr2R 14987475 intron pcs + chr2R 14987602 intron pcs + chr2R_14_14985001 chr2R_14985001 RAL-774_125 939 chr2R 14998479 14998537 chr2R 14998669 14998672 6 181 2.0 4.0 3.0 1.5 193 chr2R 14998479 intergenic not near genes chr2R 14998576 intergenic not near genes chr2R 14998672 intergenic not near genes chr2R_6_14995001 chr2R_14995001 RAL-774_125 940 chr2R 15004696 15004749 chr2R 15005078 15005128 jockey 5 378 4.0 2.5 3.2 1.2 432 chr2R 15004696 intergenic not near genes chr2R 15004912 intergenic not near genes chr2R 15005128 intergenic not near genes chr2R_5_15000001 chr2R_15000001 RAL-774_125 941 chr2R 15015424 15015476 chr2R 15022888 15022950 mdg1 8 7470 6.0 5.0 5.5 1.2 7526 chr2R 15015424 intron hbs + chr2R 15019187 intron hbs + chr2R 15022950 intron hbs + chr2R_8_15015001 chr2R_15015001 RAL-774_125 942 chr2R 15084936 15084993 chr2R 15092035 15092092 297 7 7096 3.5 5.0 4.2 1.3 7156 chr2R 15084936 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092092 5` UTR CR44457 + chr2R_7_15085001 chr2R_15085001 RAL-774_125 943 chr2R 15114043 15114119 chr2R 15114169 15114245 13 125 7.0 3.5 5.2 2.1 202 chr2R 15114043 intergenic not near genes chr2R 15114144 intergenic not near genes chr2R 15114245 intergenic not near genes chr2R_13_15110001 chr2R_15110001 RAL-774_125 944 chr2R 15119279 15119345 chr2R 15127810 15127860 Tirant 12 8524 4.0 4.5 4.2 2.3 8581 chr2R 15119279 intron chn + chr2R 15123570 intron chn + chr2R 15127860 intron chn + chr2R_12_15120001 chr2R_15120001 RAL-774_125 945 chr2R 15137922 15137981 chr2R 15138051 15138092 13 127 4.0 2.5 3.2 3.1 170 chr2R 15137922 intron chn + chr2R 15138007 intron chn + chr2R 15138092 intron chn + chr2R_13_15135001 chr2R_15135001 RAL-774_125 946 chr2R 15330168 15330237 chr2R 15330352 15330421 8 184 0.0 1.0 0.5 5.3 253 chr2R 15330168 intergenic CR44371 - chr2R 15330294 intergenic CR44371 - chr2R 15330421 3` UTR CR44371 - chr2R_8_15330001 chr2R_15330001 RAL-774_125 947 chr2R 15340653 15340664 chr2R 15349280 15349293 Tirant 4 8630 12.0 3.5 7.8 0.5 8640 chr2R 15340653 intron unc-5 + chr2R 15344973 intron unc-5 + chr2R 15349293 intron unc-5 + chr2R_4_15340001 chr2R_15340001 RAL-774_125 948 chr2R 15363627 15363678 chr2R 15363753 15363758 10 112 8.5 4.5 6.5 1.3 131 chr2R 15363627 intron unc-5 + chr2R 15363692 intron unc-5 + chr2R 15363758 intron unc-5 + chr2R_10_15360001 chr2R_15360001 RAL-774_125 949 chr2R 15434404 15434416 chr2R 15434901 15434923 4 504 7.0 4.0 5.5 0.6 519 chr2R 15434404 intron CG43729 + chr2R 15434664 intron CG43729 + chr2R 15434923 intron CG43729 + chr2R_4_15430001 chr2R_15430001 RAL-774_125 950 chr2R 15577744 15577777 chr2R 15577913 15577942 5 159 6.5 0.0 3.2 1.2 198 chr2R 15577744 intergenic not near genes chr2R 15577843 intergenic not near genes chr2R 15577942 intergenic not near genes chr2R_5_15575001 chr2R_15575001 RAL-774_125 951 chr2R 15653867 15653933 chr2R 15654002 15654068 14 132 7.0 5.5 6.2 1.9 201 chr2R 15653867 intron CG42524 + chr2R 15653968 intron CG42524 + chr2R 15654068 intron CG42524 + chr2R_14_15650001 chr2R_15650001 RAL-774_125 952 chr2R 15685348 15685389 chr2R 15685501 15685542 11 150 6.5 6.5 6.5 1.5 194 chr2R 15685348 intron,exon Ranbp11 +,CG30082 - chr2R 15685445 intron,intron Ranbp11 +,CG30082 - chr2R 15685542 intron,exon Ranbp11 +,CG30082 - chr2R_11_15685001 chr2R_15685001 RAL-774_125 953 chr2R 15704269 15704324 chr2R 15704724 15704779 16 448 6.5 5.0 5.8 2.4 510 chr2R 15704269 intergenic not near genes chr2R 15704524 intergenic not near genes chr2R 15704779 intergenic not near genes chr2R_16_15700001 chr2R_15700001 RAL-774_125 954 chr2R 15720721 15720749 chr2R 15720866 15720886 5 143 1.5 5.0 3.2 1.2 165 chr2R 15720721 intergenic not near genes chr2R 15720804 intergenic not near genes chr2R 15720886 intergenic not near genes chr2R_5_15720001 chr2R_15720001 RAL-774_125 955 chr2R 15733890 15733968 chr2R 15734095 15734180 23 202 5.0 2.5 3.8 4.8 290 chr2R 15733890 intron CG30089 + chr2R 15734035 intron CG30089 + chr2R 15734180 intron CG30089 + chr2R_23_15730001 chr2R_15730001 RAL-774_125 956 chr2R 15794827 15794897 chr2R 15794981 15795036 10 139 0.0 3.0 1.5 4.0 209 chr2R 15794827 intron,5` UTR Zasp52 -,tun + chr2R 15794932 intron,5` UTR Zasp52 -,tun + chr2R 15795036 intron,intron Zasp52 -,tun + chr2R_10_15790001 chr2R_15790001 RAL-774_125 957 chr2R 15812799 15812868 chr2R 15812920 15812993 11 124 4.0 6.5 5.2 1.8 194 chr2R 15812799 intron,intron Zasp52 -,tun + chr2R 15812896 intron,intron Zasp52 -,tun + chr2R 15812993 intron,intron Zasp52 -,tun + chr2R_11_15810001 chr2R_15810001 RAL-774_125 958 chr2R 15833492 15833540 chr2R 15833629 15833662 5 128 6.0 3.5 4.8 0.9 170 chr2R 15833492 intron,intron tun +,Poxn - chr2R 15833577 intron,intron tun +,Poxn - chr2R 15833662 intron,intron tun +,Poxn - chr2R_5_15830001 chr2R_15830001 RAL-774_125 959 chr2R 15849405 15849438 chr2R 15849501 15849559 6 113 3.5 2.0 2.8 1.6 154 chr2R 15849405 5` UTR tun + chr2R 15849482 5` UTR tun + chr2R 15849559 5` UTR tun + chr2R_6_15845001 chr2R_15845001 RAL-774_125 960 chr2R 15891779 15891834 chr2R 15891900 15891960 5 125 2.5 5.0 3.8 1.0 181 chr2R 15891779 intron sli - chr2R 15891870 intron sli - chr2R 15891960 intron sli - chr2R_5_15890001 chr2R_15890001 RAL-774_125 961 chr2R 15902855 15902906 chr2R 15902958 15903023 6 111 6.5 5.5 6.0 0.9 168 chr2R 15902855 intron sli - chr2R 15902939 intron sli - chr2R 15903023 intron sli - chr2R_6_15900001 chr2R_15900001 RAL-774_125 962 chr2R 15941646 15941681 chr2R 15941756 15941815 11 131 6.5 6.5 6.5 1.5 169 chr2R 15941646 intergenic CG8299 - chr2R 15941730 intergenic CG8299 - chr2R 15941815 intergenic CG8299 - chr2R_11_15940001 chr2R_15940001 RAL-774_125 963 chr2R 15998756 15998817 chr2R 15998901 15998955 7 158 6.0 0.0 3.0 1.8 199 chr2R 15998756 intron ATPCL - chr2R 15998856 intron ATPCL - chr2R 15998955 intron ATPCL - chr2R_7_15995001 chr2R_15995001 RAL-774_125 964 chr2R 16054918 16054962 chr2R 16055051 16055074 5 125 4.5 8.0 6.2 0.7 156 chr2R 16054918 intron CG8405 + chr2R 16054996 intron CG8405 + chr2R 16055074 intron CG8405 + chr2R_5_16055001 chr2R_16055001 RAL-774_125 965 chr2R 16061699 16061717 chr2R 16064372 16064400 Burdock 4 2679 5.0 7.5 6.2 0.6 2701 chr2R 16061699 intergenic not near genes chr2R 16063050 intergenic not near genes chr2R 16064400 intergenic not near genes chr2R_4_16060001 chr2R_16060001 RAL-774_125 966 chr2R 16217743 16217756 chr2R 16217866 16217882 4 123 13.5 6.5 10.0 0.4 139 chr2R 16217743 intron mrj - chr2R 16217812 intron mrj - chr2R 16217882 intron mrj - chr2R_4_16215001 chr2R_16215001 RAL-774_125 967 chr2R 16217759 16217783 chr2R 16217863 16217908 8 117 10.0 6.0 8.0 0.9 149 chr2R 16217759 intron mrj - chr2R 16217834 intron mrj - chr2R 16217908 intron mrj - chr2R_8_16215001 chr2R_16215001 RAL-774_125 968 chr2R 16245373 16245421 chr2R 16245517 16245560 12 141 4.5 4.0 4.2 2.3 187 chr2R 16245373 intron CngA - chr2R 16245466 intron CngA - chr2R 16245560 intron CngA - chr2R_12_16245001 chr2R_16245001 RAL-774_125 969 chr2R 16352821 16352864 chr2R 16352954 16352997 9 132 3.5 5.5 4.5 1.6 176 chr2R 16352821 intergenic not near genes chr2R 16352909 intergenic not near genes chr2R 16352997 intergenic not near genes chr2R_9_16350001 chr2R_16350001 RAL-774_125 970 chr2R 16483532 16483587 chr2R 16483662 16483719 5 128 0.0 7.5 3.8 1.0 187 chr2R 16483532 intergenic not near genes chr2R 16483626 intergenic not near genes chr2R 16483719 intergenic not near genes chr2R_5_16480001 chr2R_16480001 RAL-774_125 971 chr2R 16486826 16486857 chr2R 16486971 16486997 6 142 6.5 4.0 5.2 1.0 171 chr2R 16486826 exon CG33458 + chr2R 16486912 intron CG33458 + chr2R 16486997 intron CG33458 + chr2R_6_16485001 chr2R_16485001 RAL-774_125 972 chr2R 16539602 16539660 chr2R 16544859 16544949 copia 5 5264 4.0 0.0 2.0 1.7 5347 chr2R 16539602 intergenic not near genes chr2R 16542276 intergenic not near genes chr2R 16544949 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-774_125 973 chr2R 16544857 16544875 chr2R 16544992 16545005 5 132 0.0 1.0 0.5 3.3 148 chr2R 16544857 intergenic not near genes chr2R 16544931 intergenic not near genes chr2R 16545005 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-774_125 974 chr2R 16571830 16571901 chr2R 16571975 16572045 15 143 2.0 4.0 3.0 3.8 215 chr2R 16571830 intergenic CG4927 + chr2R 16571938 intergenic CG4927 + chr2R 16572045 intergenic CG4927 + chr2R_15_16570001 chr2R_16570001 RAL-774_125 975 chr2R 16617065 16617088 chr2R 16617195 16617218 6 130 2.0 9.5 5.8 0.9 153 chr2R 16617065 intron CG5065 + chr2R 16617142 intron CG5065 + chr2R 16617218 intron CG5065 + chr2R_6_16615001 chr2R_16615001 RAL-774_125 976 chr2R 16668898 16668956 chr2R 16669026 16669084 10 134 5.5 2.0 3.8 2.1 186 chr2R 16668898 intergenic not near genes chr2R 16668991 intergenic not near genes chr2R 16669084 intergenic not near genes chr2R_10_16665001 chr2R_16665001 RAL-774_125 977 chr2R 16723890 16723939 chr2R 16724014 16724069 5 127 5.0 4.0 4.5 0.9 179 chr2R 16723890 intron CG30463 - chr2R 16723980 intron CG30463 - chr2R 16724069 intron CG30463 - chr2R_5_16720001 chr2R_16720001 RAL-774_125 978 chr2R 16726632 16726689 chr2R 16726781 16726838 9 149 3.0 3.0 3.0 2.2 206 chr2R 16726632 intron CG30463 - chr2R 16726735 intron CG30463 - chr2R 16726838 intron CG30463 - chr2R_9_16725001 chr2R_16725001 RAL-774_125 979 chr2R 16766655 16766684 chr2R 16766788 16766817 8 131 1.5 4.5 3.0 2.0 162 chr2R 16766655 intron unc-104 - chr2R 16766736 intron unc-104 - chr2R 16766817 intron,5` UTR unc-104 -,CG5348 + chr2R_8_16765001 chr2R_16765001 RAL-774_125 980 chr2R 16775605 16775671 chr2R 16775922 16775981 9 313 2.0 4.0 3.0 2.2 376 chr2R 16775605 3` UTR Arp53D + chr2R 16775793 intergenic Arp53D + chr2R 16775981 intergenic Arp53D + chr2R_9_16775001 chr2R_16775001 RAL-774_125 981 chr2R 16981974 16981981 chr2R 16982162 16982169 5 188 3.5 2.5 3.0 1.2 195 chr2R 16981974 intron Cbp53E + chr2R 16982072 intron Cbp53E + chr2R 16982169 intron Cbp53E + chr2R_5_16980001 chr2R_16980001 RAL-774_125 982 chr2R 17079077 17079088 chr2R 17079209 17079225 4 134 3.0 10.5 6.8 0.5 148 chr2R 17079077 intron CG30460 - chr2R 17079151 intron CG30460 - chr2R 17079225 intron CG30460 - chr2R_4_17075001 chr2R_17075001 RAL-774_125 983 chr2R 17132817 17132857 chr2R 17132957 17133007 8 147 5.5 1.5 3.5 1.8 190 chr2R 17132817 intergenic not near genes chr2R 17132912 intergenic not near genes chr2R 17133007 intergenic Acp54A1 + chr2R_8_17130001 chr2R_17130001 RAL-774_125 984 chr2R 17147209 17147261 chr2R 17152290 17152342 jockey 9 5080 5.5 6.5 6.0 1.3 5133 chr2R 17147209 intergenic not near genes chr2R 17149776 intergenic not near genes chr2R 17152342 intergenic not near genes chr2R_9_17145001 chr2R_17145001 RAL-774_125 985 chr2R 17176353 17176374 chr2R 17182593 17182614 diver 4 6239 2.0 3.5 2.8 1.1 6261 chr2R 17176353 intergenic not near genes chr2R 17179484 intergenic not near genes chr2R 17182614 intergenic not near genes chr2R_4_17175001 chr2R_17175001 RAL-774_125 986 chr2R 17236466 17236501 chr2R 17241720 17241755 copia 11 5253 7.0 3.5 5.2 1.8 5289 chr2R 17236466 intron mbl + chr2R 17239110 intron mbl + chr2R 17241755 intron mbl + chr2R_11_17235001 chr2R_17235001 RAL-774_125 987 chr2R 17253753 17253795 chr2R 17253877 17253944 7 141 3.0 5.0 4.0 1.4 191 chr2R 17253753 intron mbl + chr2R 17253848 intron,3` UTR mbl +,CR43660 - chr2R 17253944 intron,3` UTR mbl +,CR43660 - chr2R_7_17250001 chr2R_17250001 RAL-774_125 988 chr2R 17263271 17263327 chr2R 17263392 17263457 7 129 2.5 2.5 2.5 2.0 186 chr2R 17263271 intron mbl + chr2R 17263364 intron mbl + chr2R 17263457 intron mbl + chr2R_7_17260001 chr2R_17260001 RAL-774_125 989 chr2R 17288791 17288826 chr2R 17289192 17289227 7 400 0.0 5.5 2.8 1.8 436 chr2R 17288791 intron mbl + chr2R 17289009 intron mbl + chr2R 17289227 intron mbl + chr2R_7_17285001 chr2R_17285001 RAL-774_125 990 chr2R 17329180 17329239 chr2R 17329298 17329355 5 120 6.0 5.5 5.8 0.7 175 chr2R 17329180 intron mbl + chr2R 17329268 intron mbl + chr2R 17329355 intron mbl + chr2R_5_17325001 chr2R_17325001 RAL-774_125 991 chr2R 17458971 17459026 chr2R 17459094 17459161 8 134 5.0 2.5 3.8 1.7 190 chr2R 17458971 intron CG14478 + chr2R 17459066 intron CG14478 + chr2R 17459161 intron CG14478 + chr2R_8_17455001 chr2R_17455001 RAL-774_125 992 chr2R 17478818 17478848 chr2R 17478910 17478976 7 110 6.5 1.5 4.0 1.4 158 chr2R 17478818 3` UTR,intron CG43110 -,veil + chr2R 17478897 3` UTR,intron CG43110 -,veil + chr2R 17478976 3` UTR,intron CG43110 -,veil + chr2R_7_17475001 chr2R_17475001 RAL-774_125 993 chr2R 17485877 17485937 chr2R 17490692 17490757 F-element 22 4816 7.5 6.0 6.8 2.8 4880 chr2R 17485877 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488317 intron NT5E-2 + chr2R 17490757 intron NT5E-2 + chr2R_22_17485001 chr2R_17485001 RAL-774_125 994 chr2R 17708349 17708401 chr2R 17708480 17708532 8 131 3.5 2.5 3.0 2.0 183 chr2R 17708349 intron CG6424 - chr2R 17708440 intron CG6424 - chr2R 17708532 intron CG6424 - chr2R_8_17705001 chr2R_17705001 RAL-774_125 995 chr2R 17760631 17760683 chr2R 17760808 17760860 8 177 4.5 6.5 5.5 1.2 229 chr2R 17760631 intergenic HLH54F +,CG5009 + chr2R 17760746 intergenic CG5009 +,HLH54F + chr2R 17760860 intergenic CG5009 +,HLH54F + chr2R_8_17760001 chr2R_17760001 RAL-774_125 996 chr2R 17782326 17782370 chr2R 17783579 17783623 pogo 4 1253 1.0 2.0 1.5 1.6 1297 chr2R 17782326 intergenic CG33981 -,fab1 - chr2R 17782974 intergenic not near genes chr2R 17783623 intergenic mir-31a - chr2R_4_17780001 chr2R_17780001 RAL-774_125 997 chr2R 17784003 17784054 chr2R 17784279 17784345 pogo 9 285 3.0 4.0 3.5 2.0 342 chr2R 17784003 intergenic mir-31a - chr2R 17784174 intergenic mir-31a - chr2R 17784345 intergenic mir-31a - chr2R_9_17780001 chr2R_17780001 RAL-774_125 998 chr2R 17821694 17821739 chr2R 17821821 17821855 5 126 2.0 4.0 3.0 1.2 161 chr2R 17821694 intron grh + chr2R 17821774 intron grh + chr2R 17821855 intron grh + chr2R_5_17820001 chr2R_17820001 RAL-774_125 999 chr2R 17834996 17835033 chr2R 17835135 17835145 6 135 5.0 2.5 3.8 1.2 149 chr2R 17834996 intron grh + chr2R 17835070 intron grh + chr2R 17835145 intron grh + chr2R_6_17835001 chr2R_17835001 RAL-774_125 1000 chr2R 17886598 17886656 chr2R 17886711 17886788 7 120 3.5 1.5 2.5 2.0 190 chr2R 17886598 intron Elk + chr2R 17886693 intron Elk + chr2R 17886788 intron Elk + chr2R_7_17885001 chr2R_17885001 RAL-774_125 1001 chr2R 17997124 17997189 chr2R 17997247 17997313 15 126 2.5 3.0 2.8 3.9 189 chr2R 17997124 intron dpr13 - chr2R 17997218 intron dpr13 - chr2R 17997313 intron dpr13 - chr2R_15_17995001 chr2R_17995001 RAL-774_125 1002 chr2R 17998013 17998021 chr2R 17998144 17998148 5 130 8.0 7.0 7.5 0.6 135 chr2R 17998013 intron dpr13 - chr2R 17998080 intron dpr13 - chr2R 17998148 intron dpr13 - chr2R_5_17995001 chr2R_17995001 RAL-774_125 1003 chr2R 18045634 18045675 chr2R 18046036 18046072 jockey 7 400 2.0 1.5 1.8 2.5 438 chr2R 18045634 intergenic not near genes chr2R 18045853 intergenic not near genes chr2R 18046072 intergenic CG5767 - chr2R_7_18045001 chr2R_18045001 RAL-774_125 1004 chr2R 18245624 18245655 chr2R 18245751 18245781 4 124 4.5 8.0 6.2 0.6 157 chr2R 18245624 intergenic not near genes chr2R 18245702 intergenic CR44420 - chr2R 18245781 intergenic CR44420 - chr2R_4_18245001 chr2R_18245001 RAL-774_125 1005 chr2R 18289376 18289443 chr2R 18289528 18289595 6 148 3.0 1.5 2.2 1.9 219 chr2R 18289376 intron,intron sbb -,CG14502 + chr2R 18289486 intron,intron sbb -,CG14502 + chr2R 18289595 5` UTR,intron sbb -,CG14502 + chr2R_6_18285001 chr2R_18285001 RAL-774_125 1006 chr2R 18358349 18358372 chr2R 18372611 18372628 roo 8 14260 8.5 3.0 5.8 1.2 14279 chr2R 18358349 intergenic not near genes chr2R 18365488 intergenic not near genes chr2R 18372628 intergenic not near genes chr2R_8_18365001 chr2R_18365001 RAL-774_125 1007 chr2R 18358374 18358421 chr2R 18372606 18372683 roo 5 14249 2.5 2.5 2.5 1.4 14309 chr2R 18358374 intergenic not near genes chr2R 18365528 intergenic not near genes chr2R 18372683 intergenic not near genes chr2R_5_18365001 chr2R_18365001 RAL-774_125 1008 chr2R 18402461 18402509 chr2R 18402589 18402642 18 132 6.5 3.5 5.0 3.0 181 chr2R 18402461 intergenic not near genes chr2R 18402552 intergenic not near genes chr2R 18402642 intergenic not near genes chr2R_18_18400001 chr2R_18400001 RAL-774_125 1009 chr2R 18405710 18405771 chr2R 18405841 18405902 10 131 6.5 3.0 4.8 1.7 192 chr2R 18405710 intergenic GstE6 +,GstE5 + chr2R 18405806 intergenic GstE6 +,GstE5 + chr2R 18405902 intergenic GstE6 + chr2R_10_18405001 chr2R_18405001 RAL-774_125 1010 chr2R 18485971 18486012 chr2R 18486087 18486107 4 116 5.0 5.0 5.0 0.7 136 chr2R 18485971 intron CG30116 - chr2R 18486039 intron CG30116 - chr2R 18486107 intron CG30116 - chr2R_4_18485001 chr2R_18485001 RAL-774_125 1011 chr2R 18487790 18487852 chr2R 18495291 18495362 blood 12 7499 1.0 3.0 2.0 4.0 7572 chr2R 18487790 intron CG30116 - chr2R 18491576 intron CG30116 - chr2R 18495362 intron CG30116 - chr2R_12_18490001 chr2R_18490001 RAL-774_125 1012 chr2R 18528145 18528219 chr2R 18528278 18528343 14 126 6.0 4.5 5.2 2.3 198 chr2R 18528145 intron CG10924 + chr2R 18528244 intron CG10924 + chr2R 18528343 intron CG10924 + chr2R_14_18525001 chr2R_18525001 RAL-774_125 1013 chr2R 18547593 18547644 chr2R 18547724 18547775 8 130 5.5 2.5 4.0 1.6 182 chr2R 18547593 3` UTR Rgk2 + chr2R 18547684 3` UTR Rgk2 + chr2R 18547775 3` UTR Rgk2 + chr2R_8_18545001 chr2R_18545001 RAL-774_125 1014 chr2R 18575811 18575824 chr2R 18581989 18582062 3S18 8 6215 0.0 0.5 0.2 6.7 6251 chr2R 18575811 intron GEFmeso - chr2R 18578936 intron GEFmeso - chr2R 18582062 intron GEFmeso - chr2R_8_18575001 chr2R_18575001 RAL-774_125 1015 chr2R 18590825 18590897 chr2R 18600022 18600088 roo 9 9196 1.5 4.0 2.8 2.4 9263 chr2R 18590825 intron GEFmeso - chr2R 18595456 intron GEFmeso - chr2R 18600088 intron GEFmeso - chr2R_9_18595001 chr2R_18595001 RAL-774_125 1016 chr2R 18646367 18646435 chr2R 18646562 18646625 11 189 7.5 6.0 6.8 1.4 258 chr2R 18646367 intron SP2637 - chr2R 18646496 intron SP2637 - chr2R 18646625 intron SP2637 - chr2R_11_18645001 chr2R_18645001 RAL-774_125 1017 chr2R 18692861 18692913 chr2R 18692998 18693042 5 134 4.5 1.0 2.8 1.3 181 chr2R 18692861 exon Sik3 + chr2R 18692952 intron Sik3 + chr2R 18693042 intron Sik3 + chr2R_5_18690001 chr2R_18690001 RAL-774_125 1018 chr2R 18768899 18768961 chr2R 18769061 18769133 11 168 3.5 3.0 3.2 2.6 234 chr2R 18768899 exon Mctp + chr2R 18769016 intron Mctp + chr2R 18769133 intron Mctp + chr2R_11_18765001 chr2R_18765001 RAL-774_125 1019 chr2R 18778563 18778578 chr2R 18778711 18778721 4 147 5.0 0.0 2.5 1.1 158 chr2R 18778563 intergenic not near genes chr2R 18778642 intergenic not near genes chr2R 18778721 intergenic not near genes chr2R_4_18775001 chr2R_18775001 RAL-774_125 1020 chr2R 18926469 18926512 chr2R 18926606 18926649 6 136 5.5 0.0 2.8 1.6 180 chr2R 18926469 intron sano + chr2R 18926559 intron sano + chr2R 18926649 intron sano + chr2R_6_18925001 chr2R_18925001 RAL-774_125 1021 chr2R 19012895 19012955 chr2R 19013039 19013099 15 140 4.0 9.0 6.5 2.0 204 chr2R 19012895 intergenic not near genes chr2R 19012997 intergenic not near genes chr2R 19013099 intergenic not near genes chr2R_15_19010001 chr2R_19010001 RAL-774_125 1022 chr2R 19026004 19026054 chr2R 19026155 19026205 5 151 5.0 2.5 3.8 1.0 201 chr2R 19026004 exon 5-HT1B - chr2R 19026104 intron 5-HT1B - chr2R 19026205 intron 5-HT1B - chr2R_5_19025001 chr2R_19025001 RAL-774_125 1023 chr2R 19072099 19072099 chr2R 19072192 19072221 4 106 7.0 3.0 5.0 0.7 122 chr2R 19072099 intron 5-HT1A + chr2R 19072160 intron 5-HT1A + chr2R 19072221 intron 5-HT1A + chr2R_4_19070001 chr2R_19070001 RAL-774_125 1024 chr2R 19078101 19078164 chr2R 19078231 19078302 16 131 3.0 6.5 4.8 2.8 201 chr2R 19078101 intron 5-HT1A + chr2R 19078202 intron 5-HT1A + chr2R 19078302 intron 5-HT1A + chr2R_16_19075001 chr2R_19075001 RAL-774_125 1025 chr2R 19078759 19078819 chr2R 19078894 19078954 6 139 0.5 4.0 2.2 1.9 195 chr2R 19078759 intron 5-HT1A + chr2R 19078856 intron 5-HT1A + chr2R 19078954 intron 5-HT1A + chr2R_6_19075001 chr2R_19075001 RAL-774_125 1026 chr2R 19103362 19103422 chr2R 19103502 19103554 4 133 3.5 1.0 2.2 1.2 192 chr2R 19103362 intron 5-HT1A + chr2R 19103458 intron 5-HT1A + chr2R 19103554 intron 5-HT1A + chr2R_4_19100001 chr2R_19100001 RAL-774_125 1027 chr2R 19104835 19104906 chr2R 19104990 19105052 12 154 2.0 2.5 2.2 3.8 217 chr2R 19104835 intron 5-HT1A + chr2R 19104944 intron 5-HT1A + chr2R 19105052 intron 5-HT1A + chr2R_12_19100001 chr2R_19100001 RAL-774_125 1028 chr2R 19274919 19274964 chr2R 19275040 19275090 6 120 5.0 6.5 5.8 0.9 171 chr2R 19274919 intron rib + chr2R 19275004 intron rib + chr2R 19275090 intron rib + chr2R_6_19275001 chr2R_19275001 RAL-774_125 1029 chr2R 19300917 19300981 chr2R 19301050 19301114 18 132 0.5 4.5 2.5 5.1 197 chr2R 19300917 intron Tab2 + chr2R 19301016 intron Tab2 + chr2R 19301114 intron Tab2 + chr2R_18_19300001 chr2R_19300001 RAL-774_125 1030 chr2R 19385234 19385311 chr2R 19385567 19385647 12 333 2.5 3.0 2.8 3.2 413 chr2R 19385234 intergenic CG10073 + chr2R 19385440 intergenic CG10073 +,CG10081 + chr2R 19385647 intergenic CG10081 + chr2R_12_19385001 chr2R_19385001 RAL-774_125 1031 chr2R 19536423 19536494 chr2R 19536550 19536626 11 129 2.5 3.5 3.0 2.8 203 chr2R 19536423 intron sm - chr2R 19536524 intron sm - chr2R 19536626 intron sm - chr2R_11_19535001 chr2R_19535001 RAL-774_125 1032 chr2R 19539831 19539883 chr2R 19539960 19540001 8 129 4.0 2.5 3.2 1.9 170 chr2R 19539831 intron sm - chr2R 19539916 intron sm - chr2R 19540001 intron sm - chr2R_8_19535001 chr2R_19535001 RAL-774_125 1033 chr2R 19583066 19583130 chr2R 19583195 19583257 9 127 1.0 6.5 3.8 1.9 191 chr2R 19583066 intron sm - chr2R 19583162 intron sm - chr2R 19583257 intron sm - chr2R_9_19580001 chr2R_19580001 RAL-774_125 1034 chr2R 19714700 19714724 chr2R 19714826 19714847 6 126 0.0 5.0 2.5 1.7 147 chr2R 19714700 3` UTR CG8517 + chr2R 19714774 3` UTR CG8517 + chr2R 19714847 3` UTR CG8517 + chr2R_6_19710001 chr2R_19710001 RAL-774_125 1035 chr2R 19715814 19715857 chr2R 19723333 19723366 blood 8 7513 6.5 5.0 5.8 1.2 7552 chr2R 19715814 intergenic not near genes chr2R 19719590 intergenic not near genes chr2R 19723366 intergenic not near genes chr2R_8_19715001 chr2R_19715001 RAL-774_125 1036 chr2R 19773971 19774031 chr2R 19774128 19774194 7 162 2.5 1.5 2.0 2.3 223 chr2R 19773971 intergenic not near genes chr2R 19774082 intergenic not near genes chr2R 19774194 intergenic not near genes chr2R_7_19770001 chr2R_19770001 RAL-774_125 1037 chr2R 19776569 19776615 chr2R 19779933 19779978 jockey 9 3370 4.0 2.5 3.2 2.1 3409 chr2R 19776569 intergenic not near genes chr2R 19778274 intergenic not near genes chr2R 19779978 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-774_125 1038 chr2R 19788694 19788758 chr2R 19789111 19789174 13 412 5.0 3.5 4.2 2.5 480 chr2R 19788694 5` UTR CR45231 + chr2R 19788934 5` UTR CR45231 + chr2R 19789174 5` UTR CR45231 + chr2R_13_19785001 chr2R_19785001 RAL-774_125 1039 chr2R 19797328 19797398 chr2R 19797479 19797499 12 143 3.5 6.5 5.0 2.0 171 chr2R 19797328 intergenic not near genes chr2R 19797414 intergenic not near genes chr2R 19797499 intergenic not near genes chr2R_12_19795001 chr2R_19795001 RAL-774_125 1040 chr2R 19914818 19914872 chr2R 19922270 19922329 mdg1 6 7460 3.5 3.0 3.2 1.4 7511 chr2R 19914818 intergenic not near genes chr2R 19918574 intergenic not near genes chr2R 19922329 intergenic not near genes chr2R_6_19915001 chr2R_19915001 RAL-774_125 1041 chr2R 19951913 19951996 chr2R 19952061 19952140 5 144 4.0 2.0 3.0 1.2 227 chr2R 19951913 3` UTR CG10822 + chr2R 19952026 intergenic CG10822 + chr2R 19952140 intergenic CG10822 + chr2R_5_19950001 chr2R_19950001 RAL-774_125 1042 chr2R 20069188 20069244 chr2R 20071876 20071932 opus 8 2685 0.0 1.5 0.8 4.4 2744 chr2R 20069188 intergenic not near genes chr2R 20070560 intergenic not near genes chr2R 20071932 intergenic not near genes chr2R_8_20070001 chr2R_20070001 RAL-774_125 1043 chr2R 20080601 20080625 chr2R 20080728 20080752 6 126 0.5 9.0 4.8 1.0 151 chr2R 20080601 intergenic not near genes chr2R 20080676 intergenic not near genes chr2R 20080752 intergenic not near genes chr2R_6_20080001 chr2R_20080001 RAL-774_125 1044 chr2R 20125732 20125749 chr2R 20125851 20125875 4 124 7.0 9.5 8.2 0.4 143 chr2R 20125732 intergenic not near genes chr2R 20125804 intergenic not near genes chr2R 20125875 intergenic not near genes chr2R_4_20125001 chr2R_20125001 RAL-774_125 1045 chr2R 20395016 20395051 chr2R 20395232 20395277 9 224 3.5 1.5 2.5 2.6 261 chr2R 20395016 intergenic not near genes chr2R 20395146 intergenic not near genes chr2R 20395277 intergenic not near genes chr2R_9_20395001 chr2R_20395001 RAL-774_125 1046 chr2R 20479846 20479859 chr2R 20479963 20479985 4 124 8.5 4.5 6.5 0.5 139 chr2R 20479846 intergenic not near genes chr2R 20479916 intergenic not near genes chr2R 20479985 intergenic not near genes chr2R_4_20475001 chr2R_20475001 RAL-774_125 1047 chr2R 20497807 20497879 chr2R 20498008 20498058 23 196 3.5 5.0 4.2 4.4 251 chr2R 20497807 intergenic not near genes chr2R 20497932 intergenic not near genes chr2R 20498058 intergenic not near genes chr2R_23_20495001 chr2R_20495001 RAL-774_125 1048 chr2R 20522998 20523066 chr2R 20523159 20523202 12 147 2.5 4.5 3.5 2.7 204 chr2R 20522998 intergenic not near genes chr2R 20523100 intergenic not near genes chr2R 20523202 intergenic not near genes chr2R_12_20520001 chr2R_20520001 RAL-774_125 1049 chr2R 20528726 20528771 chr2R 20528929 20528985 12 218 4.0 4.5 4.2 2.3 259 chr2R 20528726 exon CG30151 - chr2R 20528856 exon CG30151 - chr2R 20528985 exon CG30151 - chr2R_12_20525001 chr2R_20525001 RAL-774_125 1050 chr2R 20531709 20531759 chr2R 20531826 20531828 9 124 2.0 3.0 2.5 2.6 119 chr2R 20531709 intergenic CR44651 + chr2R 20531768 intergenic CR44651 + chr2R 20531828 intergenic CR44651 + chr2R_9_20530001 chr2R_20530001 RAL-774_125 1051 chr2R 20555289 20555333 chr2R 20555431 20555475 11 140 4.5 4.0 4.2 2.1 186 chr2R 20555289 intergenic not near genes chr2R 20555382 intergenic not near genes chr2R 20555475 intergenic not near genes chr2R_11_20555001 chr2R_20555001 RAL-774_125 1052 chr2R 20572536 20572587 chr2R 20572676 20572727 5 140 2.5 2.5 2.5 1.4 191 chr2R 20572536 intron qsm - chr2R 20572632 intron qsm - chr2R 20572727 intron qsm - chr2R_5_20570001 chr2R_20570001 RAL-774_125 1053 chr2R 20667320 20667336 chr2R 20667482 20667483 5 158 10.5 13.0 11.8 0.4 163 chr2R 20667320 intergenic Fem-1 -,exu - chr2R 20667402 intergenic exu -,Fem-1 - chr2R 20667483 3` UTR exu - chr2R_5_20665001 chr2R_20665001 RAL-774_125 1054 chr2R 20671164 20671233 chr2R 20671299 20671343 8 124 4.5 2.0 3.2 1.9 179 chr2R 20671164 intergenic CG30152 +,exu - chr2R 20671254 5` UTR CG30152 + chr2R 20671343 5` UTR CG30152 + chr2R_8_20670001 chr2R_20670001 RAL-774_125 1055 chr2R 20698050 20698115 chr2R 20698216 20698281 7 164 1.0 1.0 1.0 3.5 231 chr2R 20698050 intergenic dpr + chr2R 20698166 intergenic dpr + chr2R 20698281 intergenic dpr + chr2R_7_20695001 chr2R_20695001 RAL-774_125 1056 chr2R 20739404 20739437 chr2R 20744217 20744254 F-element 5 4811 6.5 4.0 5.2 0.8 4850 chr2R 20739404 intron dpr + chr2R 20741829 intron dpr + chr2R 20744254 intron dpr + chr2R_5_20740001 chr2R_20740001 RAL-774_125 1057 chr2R 20739438 20739469 chr2R 20744216 20744287 F-element 5 4809 3.5 3.5 3.5 1.1 4849 chr2R 20739438 intron dpr + chr2R 20741862 intron dpr + chr2R 20744287 intron dpr + chr2R_5_20740001 chr2R_20740001 RAL-774_125 1058 chr2R 20757438 20757457 chr2R 20757550 20757583 5 121 2.5 9.0 5.8 0.7 145 chr2R 20757438 intergenic not near genes chr2R 20757510 intergenic not near genes chr2R 20757583 intergenic not near genes chr2R_5_20755001 chr2R_20755001 RAL-774_125 1059 chr2R 20783271 20783319 chr2R 20788093 20788136 F-element 7 4821 4.0 4.0 4.0 1.4 4865 chr2R 20783271 intergenic not near genes chr2R 20785704 intergenic not near genes chr2R 20788136 intergenic CG43666 - chr2R_7_20785001 chr2R_20785001 RAL-774_125 1060 chr2R 20795998 20796064 chr2R 20796161 20796212 14 160 5.0 4.5 4.8 2.4 214 chr2R 20795998 intergenic not near genes chr2R 20796105 intergenic not near genes chr2R 20796212 intergenic not near genes chr2R_14_20795001 chr2R_20795001 RAL-774_125 1061 chr2R 20817478 20817504 chr2R 20818033 20818053 8 550 8.0 3.5 5.8 1.2 575 chr2R 20817478 intergenic not near genes chr2R 20817766 intergenic not near genes chr2R 20818053 intergenic not near genes chr2R_8_20815001 chr2R_20815001 RAL-774_125 1062 chr2R 20832996 20833040 chr2R 20833125 20833132 5 120 6.0 8.0 7.0 0.6 136 chr2R 20832996 intron,intron insc -,sktl - chr2R 20833064 intron,intron insc -,sktl - chr2R 20833132 intron,intron insc -,sktl - chr2R_5_20830001 chr2R_20830001 RAL-774_125 1063 chr2R 20833046 20833050 chr2R 20833110 20833183 5 106 3.0 7.0 5.0 0.8 137 chr2R 20833046 intron,intron insc -,sktl - chr2R 20833114 intron,intron insc -,sktl - chr2R 20833183 intron,intron insc -,sktl - chr2R_5_20830001 chr2R_20830001 RAL-774_125 1064 chr2R 20962873 20962920 chr2R 20963013 20963068 11 146 6.5 1.5 4.0 2.2 195 chr2R 20962873 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963068 intergenic not near genes chr2R_11_20960001 chr2R_20960001 RAL-774_125 1065 chr2R 21079934 21079983 chr2R 21080067 21080116 6 132 9.0 4.0 6.5 0.8 182 chr2R 21079934 intron Treh + chr2R 21080025 intron Treh + chr2R 21080116 intron Treh + chr2R_6_21080001 chr2R_21080001 RAL-774_125 1066 chr2R 21117422 21117487 chr2R 21117828 21117896 11 404 1.5 2.0 1.8 3.9 474 chr2R 21117422 intron ktub + chr2R 21117659 intron ktub + chr2R 21117896 intron ktub + chr2R_11_21115001 chr2R_21115001 RAL-774_125 1067 chr2R 21151102 21151146 chr2R 21153764 21153829 opus 8 2677 0.5 5.0 2.8 2.1 2727 chr2R 21151102 intron CG30389 - chr2R 21152466 intron CG30389 - chr2R 21153829 intron CG30389 - chr2R_8_21150001 chr2R_21150001 RAL-774_125 1068 chr2R 21188181 21188246 chr2R 21188312 21188377 10 128 1.5 4.5 3.0 2.5 196 chr2R 21188181 exon tud + chr2R 21188279 intron tud + chr2R 21188377 exon tud + chr2R_10_21185001 chr2R_21185001 RAL-774_125 1069 chr2R 21217276 21217282 chr2R 21217413 21217418 5 137 11.5 0.0 5.8 0.7 142 chr2R 21217276 exon CG15661 - chr2R 21217347 5` UTR CG15661 - chr2R 21217418 5` UTR CG15661 - chr2R_5_21215001 chr2R_21215001 RAL-774_125 1070 chr2R 21226033 21226073 chr2R 21226273 21226311 10 252 4.0 3.0 3.5 2.2 278 chr2R 21226033 intron ASPP - chr2R 21226172 intron ASPP - chr2R 21226311 intron ASPP - chr2R_10_21225001 chr2R_21225001 RAL-774_125 1071 chr2R 21285382 21285434 chr2R 21285509 21285556 19 123 7.0 6.0 6.5 2.5 174 chr2R 21285382 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285469 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285556 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_19_21285001 chr2R_21285001 RAL-774_125 1072 chr2R 21381472 21381533 chr2R 21381607 21381669 12 133 2.5 8.0 5.2 1.9 197 chr2R 21381472 intergenic not near genes chr2R 21381570 intergenic not near genes chr2R 21381669 intergenic not near genes chr2R_12_21380001 chr2R_21380001 RAL-774_125 1073 chr2R 21461422 21461449 chr2R 21461578 21461605 8 154 7.0 3.0 5.0 1.3 183 chr2R 21461422 intron Sdc - chr2R 21461514 intron Sdc - chr2R 21461605 intron Sdc - chr2R_8_21460001 chr2R_21460001 RAL-774_125 1074 chr2R 21474717 21474755 chr2R 21474889 21474922 6 170 1.5 1.5 1.5 2.4 205 chr2R 21474717 intron Sdc - chr2R 21474820 intron Sdc - chr2R 21474922 intron Sdc - chr2R_6_21470001 chr2R_21470001 RAL-774_125 1075 chr2R 21534427 21534485 chr2R 21534554 21534612 11 127 3.0 7.0 5.0 1.8 185 chr2R 21534427 intron Egfr + chr2R 21534520 intron Egfr + chr2R 21534612 intron Egfr + chr2R_11_21530001 chr2R_21530001 RAL-774_125 1076 chr2R 21563347 21563413 chr2R 21563720 21563777 9 363 5.0 0.5 2.8 2.4 430 chr2R 21563347 intron CG10440 - chr2R 21563562 intron CG10440 - chr2R 21563777 intron CG10440 - chr2R_9_21560001 chr2R_21560001 RAL-774_125 1077 chr2R 21592806 21592818 chr2R 21592939 21592951 5 132 6.0 6.0 6.0 0.7 145 chr2R 21592806 intergenic not near genes chr2R 21592878 intergenic not near genes chr2R 21592951 intergenic not near genes chr2R_5_21590001 chr2R_21590001 RAL-774_125 1078 chr2R 21592821 21592852 chr2R 21592930 21592951 4 106 4.0 5.5 4.8 0.7 130 chr2R 21592821 intergenic not near genes chr2R 21592886 intergenic not near genes chr2R 21592951 intergenic not near genes chr2R_4_21590001 chr2R_21590001 RAL-774_125 1079 chr2R 21710896 21710962 chr2R 21711043 21711109 14 146 3.0 4.0 3.5 3.1 213 chr2R 21710896 intron,intron HmgD +,CG30403 - chr2R 21711002 intron,intron HmgD +,CG30403 - chr2R 21711109 intron,intron HmgD +,CG30403 - chr2R_14_21710001 chr2R_21710001 RAL-774_125 1080 chr2R 21721539 21721611 chr2R 21721674 21721748 7 134 1.5 0.5 1.0 3.5 209 chr2R 21721539 intron LBR + chr2R 21721644 intron LBR + chr2R 21721748 intron LBR + chr2R_7_21720001 chr2R_21720001 RAL-774_125 1081 chr2R 21726667 21726676 chr2R 21726848 21726857 5 181 3.0 2.5 2.8 1.3 190 chr2R 21726667 intergenic not near genes chr2R 21726762 intergenic not near genes chr2R 21726857 intergenic not near genes chr2R_5_21725001 chr2R_21725001 RAL-774_125 1082 chr2R 21738251 21738283 chr2R 21747448 21747458 roo 4 9194 3.5 4.5 4.0 0.8 9207 chr2R 21738251 intergenic not near genes chr2R 21742854 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-774_125 1083 chr2R 21753046 21753109 chr2R 21753581 21753644 roo 20 532 3.0 6.5 4.8 3.4 598 chr2R 21753046 intergenic not near genes chr2R 21753345 intergenic not near genes chr2R 21753644 intergenic not near genes chr2R_20_21750001 chr2R_21750001 RAL-774_125 1084 chr2R 21759525 21759535 chr2R 21759660 21759666 4 133 7.0 3.0 5.0 0.7 141 chr2R 21759525 intergenic not near genes chr2R 21759596 intergenic not near genes chr2R 21759666 intergenic not near genes chr2R_4_21755001 chr2R_21755001 RAL-774_125 1085 chr2R 21759542 21759591 chr2R 21759649 21759722 12 124 4.0 3.0 3.5 2.7 180 chr2R 21759542 intergenic not near genes chr2R 21759632 intergenic not near genes chr2R 21759722 intergenic not near genes chr2R_12_21755001 chr2R_21755001 RAL-774_125 1086 chr2R 21777393 21777445 chr2R 21777526 21777578 12 133 4.0 3.0 3.5 2.7 185 chr2R 21777393 intergenic not near genes chr2R 21777486 intergenic not near genes chr2R 21777578 intergenic not near genes chr2R_12_21775001 chr2R_21775001 RAL-774_125 1087 chr2R 21802371 21802438 chr2R 21802500 21802562 10 128 3.5 3.5 3.5 2.2 191 chr2R 21802371 intergenic not near genes chr2R 21802466 intergenic not near genes chr2R 21802562 intergenic not near genes chr2R_10_21800001 chr2R_21800001 RAL-774_125 1088 chr2R 21809489 21809547 chr2R 21817779 21817831 roo 12 8286 5.5 6.5 6.0 1.7 8342 chr2R 21809489 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817831 intergenic not near genes chr2R_12_21810001 chr2R_21810001 RAL-774_125 1089 chr2R 21833475 21833539 chr2R 21833604 21833667 7 128 4.0 3.5 3.8 1.5 192 chr2R 21833475 exon CG34040 - chr2R 21833571 intergenic CG34040 - chr2R 21833667 intergenic CG34040 - chr2R_7_21830001 chr2R_21830001 RAL-774_125 1090 chr2R 21857299 21857371 chr2R 21857438 21857476 12 132 4.5 4.0 4.2 2.3 177 chr2R 21857299 intergenic not near genes chr2R 21857388 intergenic not near genes chr2R 21857476 intergenic not near genes chr2R_12_21855001 chr2R_21855001 RAL-774_125 1091 chr2R 21870908 21870964 chr2R 21871037 21871093 7 128 1.0 2.5 1.8 2.5 185 chr2R 21870908 intergenic not near genes chr2R 21871000 intergenic not near genes chr2R 21871093 intergenic not near genes chr2R_7_21870001 chr2R_21870001 RAL-774_125 1092 chr2R 21886093 21886164 chr2R 21886222 21886314 11 141 5.0 1.5 3.2 2.6 221 chr2R 21886093 intron Fili + chr2R 21886204 intron Fili + chr2R 21886314 intron Fili + chr2R_11_21885001 chr2R_21885001 RAL-774_125 1093 chr2R 21888298 21888323 chr2R 21888440 21888461 9 143 1.5 4.5 3.0 2.2 163 chr2R 21888298 intron Fili + chr2R 21888380 intron Fili + chr2R 21888461 intron Fili + chr2R_9_21885001 chr2R_21885001 RAL-774_125 1094 chr2R 21889556 21889591 chr2R 21889698 21889702 4 132 3.0 2.0 2.5 1.1 146 chr2R 21889556 intron Fili + chr2R 21889629 intron Fili + chr2R 21889702 intron Fili + chr2R_4_21885001 chr2R_21885001 RAL-774_125 1095 chr2R 21916077 21916109 chr2R 21916199 21916231 4 124 2.0 0.0 1.0 2.0 154 chr2R 21916077 intron Fili + chr2R 21916154 intron Fili + chr2R 21916231 intron Fili + chr2R_4_21915001 chr2R_21915001 RAL-774_125 1096 chr2R 21966500 21966530 chr2R 21966638 21966668 7 138 7.0 0.0 3.5 1.6 168 chr2R 21966500 intron ppk9 + chr2R 21966584 intron ppk9 + chr2R 21966668 intron ppk9 + chr2R_7_21965001 chr2R_21965001 RAL-774_125 1097 chr2R 21992389 21992427 chr2R 21992514 21992554 7 126 1.5 0.0 0.8 3.9 165 chr2R 21992389 intron CG34370 - chr2R 21992472 intron CG34370 - chr2R 21992554 intron CG34370 - chr2R_7_21990001 chr2R_21990001 RAL-774_125 1098 chr2R 22012958 22013001 chr2R 22013097 22013146 10 144 0.5 5.0 2.8 2.6 188 chr2R 22012958 intron CG34370 - chr2R 22013052 intron CG34370 - chr2R 22013146 intron CG34370 - chr2R_10_22010001 chr2R_22010001 RAL-774_125 1099 chr2R 22029430 22029506 chr2R 22029617 22029694 10 187 2.0 3.5 2.8 2.6 264 chr2R 22029430 intron CG34370 - chr2R 22029562 intron CG34370 - chr2R 22029694 intron CG34370 - chr2R_10_22025001 chr2R_22025001 RAL-774_125 1100 chr2R 22039007 22039065 chr2R 22039354 22039405 12 345 5.5 7.0 6.2 1.7 398 chr2R 22039007 intron CG34370 - chr2R 22039206 intron CG34370 - chr2R 22039405 5` UTR CG34370 - chr2R_12_22035001 chr2R_22035001 RAL-774_125 1101 chr2R 22040121 22040147 chr2R 22040235 22040278 4 122 5.5 2.5 4.0 0.8 157 chr2R 22040121 intergenic not near genes chr2R 22040200 intergenic not near genes chr2R 22040278 intergenic not near genes chr2R_4_22040001 chr2R_22040001 RAL-774_125 1102 chr2R 22072632 22072705 chr2R 22072767 22072803 8 128 2.5 3.0 2.8 2.1 171 chr2R 22072632 exon CG11474 - chr2R 22072718 intron CG11474 - chr2R 22072803 exon CG11474 - chr2R_8_22070001 chr2R_22070001 RAL-774_125 1103 chr2R 22132242 22132285 chr2R 22132372 22132415 5 128 3.0 3.5 3.2 1.2 173 chr2R 22132242 intergenic not near genes chr2R 22132328 intergenic not near genes chr2R 22132415 intergenic not near genes chr2R_5_22130001 chr2R_22130001 RAL-774_125 1104 chr2R 22135422 22135447 chr2R 22135569 22135589 6 148 6.0 7.0 6.5 0.8 167 chr2R 22135422 intergenic not near genes chr2R 22135506 intergenic not near genes chr2R 22135589 intergenic not near genes chr2R_6_22135001 chr2R_22135001 RAL-774_125 1105 chr2R 22178705 22178741 chr2R 22178837 22178878 10 136 3.5 2.5 3.0 2.5 173 chr2R 22178705 intron CG11170 - chr2R 22178792 intron CG11170 - chr2R 22178878 intron CG11170 - chr2R_10_22175001 chr2R_22175001 RAL-774_125 1106 chr2R 22185631 22185706 chr2R 22185780 22185855 4 149 1.5 0.0 0.8 2.2 224 chr2R 22185631 exon MED16 + chr2R 22185743 3` UTR MED16 + chr2R 22185855 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-774_125 1107 chr2R 22248816 22248869 chr2R 22248918 22248996 9 115 4.0 5.0 4.5 1.6 180 chr2R 22248816 intron dve + chr2R 22248906 intron dve + chr2R 22248996 intron dve + chr2R_9_22245001 chr2R_22245001 RAL-774_125 1108 chr2R 22349651 22349714 chr2R 22351485 22351548 jockey 13 1831 6.0 5.0 5.5 2.0 1897 chr2R 22349651 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351548 intron Liprin-gamma - chr2R_13_22350001 chr2R_22350001 RAL-774_125 1109 chr2R 22360340 22360350 chr2R 22360823 22360823 jockey 4 480 9.0 4.0 6.5 0.5 483 chr2R 22360340 intron Liprin-gamma - chr2R 22360582 intron Liprin-gamma - chr2R 22360823 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-774_125 1110 chr2R 22362619 22362685 chr2R 22362743 22362814 10 127 3.5 5.5 4.5 1.8 195 chr2R 22362619 intron Liprin-gamma - chr2R 22362716 intron Liprin-gamma - chr2R 22362814 intron Liprin-gamma - chr2R_10_22360001 chr2R_22360001 RAL-774_125 1111 chr2R 22370736 22370770 chr2R 22370868 22370896 4 130 4.0 1.5 2.8 1.1 160 chr2R 22370736 intron Liprin-gamma - chr2R 22370816 intron Liprin-gamma - chr2R 22370896 intron Liprin-gamma - chr2R_4_22370001 chr2R_22370001 RAL-774_125 1112 chr2R 22380322 22380389 chr2R 22380455 22380530 12 140 4.5 1.5 3.0 3.0 208 chr2R 22380322 intron wrapper + chr2R 22380426 intron wrapper + chr2R 22380530 intron wrapper + chr2R_12_22380001 chr2R_22380001 RAL-774_125 1113 chr2R 22460333 22460405 chr2R 22460462 22460534 13 129 3.5 4.0 3.8 2.7 201 chr2R 22460333 intron CG10384 + chr2R 22460434 intron CG10384 + chr2R 22460534 intron CG10384 + chr2R_13_22460001 chr2R_22460001 RAL-774_125 1114 chr2R 22465275 22465312 chr2R 22465517 22465555 BS 7 242 9.0 4.0 6.5 0.9 280 chr2R 22465275 intron CG10384 + chr2R 22465415 intron CG10384 + chr2R 22465555 intron CG10384 + chr2R_7_22465001 chr2R_22465001 RAL-774_125 1115 chr2R 22499795 22499880 chr2R 22499925 22500006 6 126 0.5 1.0 0.8 3.3 211 chr2R 22499795 intron px - chr2R 22499900 intron px - chr2R 22500006 intron px - chr2R_6_22495001 chr2R_22495001 RAL-774_125 1116 chr2R 22503818 22503884 chr2R 22503963 22504016 4 142 0.0 4.5 2.2 1.2 198 chr2R 22503818 intron px - chr2R 22503917 intron px - chr2R 22504016 intron px - chr2R_4_22500001 chr2R_22500001 RAL-774_125 1117 chr2R 22506667 22506735 chr2R 22506795 22506857 5 125 4.0 4.0 4.0 1.0 190 chr2R 22506667 intron px - chr2R 22506762 intron px - chr2R 22506857 intron px - chr2R_5_22505001 chr2R_22505001 RAL-774_125 1118 chr2R 22525720 22525785 chr2R 22529329 22529384 jockey 7 3602 4.5 2.5 3.5 1.6 3664 chr2R 22525720 intron px - chr2R 22527552 intron px - chr2R 22529384 intron px - chr2R_7_22525001 chr2R_22525001 RAL-774_125 1119 chr2R 22588123 22588157 chr2R 22588251 22588297 8 135 5.5 3.5 4.5 1.5 174 chr2R 22588123 intron dnr1 - chr2R 22588210 intron dnr1 - chr2R 22588297 intron dnr1 - chr2R_8_22585001 chr2R_22585001 RAL-774_125 1120 chr2R 22623411 22623479 chr2R 22623601 22623658 19 186 4.5 8.5 6.5 2.5 247 chr2R 22623411 intron CG33143 + chr2R 22623534 intron CG33143 + chr2R 22623658 intron CG33143 + chr2R_19_22620001 chr2R_22620001 RAL-774_125 1121 chr2R 22643891 22643943 chr2R 22644012 22644069 22 126 3.0 3.0 3.0 5.5 178 chr2R 22643891 5` UTR Ugt58Fa - chr2R 22643980 intergenic Ugt58Fa - chr2R 22644069 intergenic Ugt58Fa - chr2R_22_22640001 chr2R_22640001 RAL-774_125 1122 chr2R 22771143 22771214 chr2R 22771285 22771357 10 132 2.5 3.5 3.0 2.5 214 chr2R 22771143 intron CG42260 - chr2R 22771250 intron CG42260 - chr2R 22771357 intron CG42260 - chr2R_10_22770001 chr2R_22770001 RAL-774_125 1123 chr2R 22774922 22774983 chr2R 22775391 22775452 jockey 12 466 5.5 7.5 6.5 1.6 530 chr2R 22774922 intron CG42260 - chr2R 22775187 intron CG42260 - chr2R 22775452 intron CG42260 - chr2R_12_22775001 chr2R_22775001 RAL-774_125 1124 chr2R 22785687 22785751 chr2R 22785815 22785863 8 125 3.5 2.5 3.0 2.0 176 chr2R 22785687 intron CG42260 - chr2R 22785775 intron CG42260 - chr2R 22785863 intron CG42260 - chr2R_8_22785001 chr2R_22785001 RAL-774_125 1125 chr2R 22834751 22834793 chr2R 22834881 22834916 5 147 0.5 0.0 0.2 4.2 165 chr2R 22834751 intron CG12490 + chr2R 22834834 intron CG12490 + chr2R 22834916 intron CG12490 + chr2R_5_22830001 chr2R_22830001 RAL-774_125 1126 chr2R 22842990 22843038 chr2R 22845002 22845050 flea 5 2012 6.5 5.5 6.0 0.7 2060 chr2R 22842990 intergenic CG9826 + chr2R 22844020 intergenic not near genes chr2R 22845050 intergenic not near genes chr2R_5_22840001 chr2R_22840001 RAL-774_125 1127 chr2R 22953340 22953382 chr2R 22953484 22953519 5 141 4.0 4.0 4.0 1.0 179 chr2R 22953340 intron CR32835 - chr2R 22953430 3` UTR CR32835 - chr2R 22953519 3` UTR CR32835 - chr2R_5_22950001 chr2R_22950001 RAL-774_125 1128 chr2R 22970643 22970707 chr2R 22972133 22972183 9 1485 8.5 14.5 11.5 0.7 1540 chr2R 22970643 intergenic not near genes chr2R 22971413 intergenic not near genes chr2R 22972183 intergenic not near genes chr2R_9_22970001 chr2R_22970001 RAL-774_125 1129 chr2R 22970495 22970529 chr2R 22972683 22972722 7 2182 9.0 22.5 15.8 0.4 2227 chr2R 22970495 intergenic not near genes chr2R 22971608 intergenic not near genes chr2R 22972722 intergenic not near genes chr2R_7_22970001 chr2R_22970001 RAL-774_125 1130 chr2R 22972796 22972858 chr2R 22972930 22972980 12 135 1.5 7.0 4.2 2.3 184 chr2R 22972796 intergenic not near genes chr2R 22972888 intergenic not near genes chr2R 22972980 intergenic not near genes chr2R_12_22970001 chr2R_22970001 RAL-774_125 1131 chr2R 22988268 22988318 chr2R 22988398 22988444 13 124 5.5 4.5 5.0 2.2 176 chr2R 22988268 intron twi + chr2R 22988356 intron twi + chr2R 22988444 intron twi + chr2R_13_22985001 chr2R_22985001 RAL-774_125 1132 chr2R 22991581 22991658 chr2R 22991723 22991791 15 135 7.0 3.5 5.2 2.4 210 chr2R 22991581 intron twi + chr2R 22991686 intron twi + chr2R 22991791 intron twi + chr2R_15_22990001 chr2R_22990001 RAL-774_125 1133 chr2R 23134826 23134848 chr2R 23134929 23134943 6 112 2.5 7.0 4.8 1.0 117 chr2R 23134826 intergenic not near genes chr2R 23134884 intergenic not near genes chr2R 23134943 intergenic not near genes chr2R_6_23130001 chr2R_23130001 RAL-774_125 1134 chr2R 23158303 23158355 chr2R 23158430 23158482 8 121 7.0 5.0 6.0 1.1 179 chr2R 23158303 intron CG9899 + chr2R 23158392 intron CG9899 + chr2R 23158482 intron CG9899 + chr2R_8_23155001 chr2R_23155001 RAL-774_125 1135 chr2R 23174993 23175060 chr2R 23175120 23175174 16 118 4.5 2.0 3.2 3.8 181 chr2R 23174993 intron CG34371 - chr2R 23175084 intron CG34371 - chr2R 23175174 intron CG34371 - chr2R_16_23175001 chr2R_23175001 RAL-774_125 1136 chr2R 23186040 23186120 chr2R 23186235 23186242 16 188 2.0 5.0 3.5 3.6 202 chr2R 23186040 intron CG34371 - chr2R 23186141 intron CG34371 - chr2R 23186242 intron CG34371 - chr2R_16_23185001 chr2R_23185001 RAL-774_125 1137 chr2R 23189979 23190004 chr2R 23190109 23190119 5 125 4.5 0.5 2.5 1.4 140 chr2R 23189979 intron CG34371 - chr2R 23190049 intron CG34371 - chr2R 23190119 intron CG34371 - chr2R_5_23190001 chr2R_23190001 RAL-774_125 1138 chr2R 23236781 23236851 chr2R 23236929 23236995 10 143 1.5 4.0 2.8 2.6 214 chr2R 23236781 intergenic not near genes chr2R 23236888 intergenic not near genes chr2R 23236995 intergenic not near genes chr2R_10_23235001 chr2R_23235001 RAL-774_125 1139 chr2R 23400665 23400749 chr2R 23400800 23400808 8 102 6.5 4.5 5.5 1.2 143 chr2R 23400665 intron CG3520 - chr2R 23400736 intron CG3520 - chr2R 23400808 intron CG3520 - chr2R_8_23400001 chr2R_23400001 RAL-774_125 1140 chr2R 23402568 23402636 chr2R 23407694 23407757 flea 15 5126 1.0 3.5 2.2 4.7 5189 chr2R 23402568 intergenic CG3520 - chr2R 23405162 intergenic not near genes chr2R 23407757 intergenic not near genes chr2R_15_23405001 chr2R_23405001 RAL-774_125 1141 chr2R 23411010 23411079 chr2R 23411137 23411211 9 129 4.0 2.0 3.0 2.2 201 chr2R 23411010 intergenic not near genes chr2R 23411110 intergenic not near genes chr2R 23411211 intergenic not near genes chr2R_9_23410001 chr2R_23410001 RAL-774_125 1142 chr2R 23413540 23413560 chr2R 23413630 23413671 4 101 9.5 4.0 6.8 0.5 131 chr2R 23413540 intron CG9812 - chr2R 23413606 intron CG9812 - chr2R 23413671 intron CG9812 - chr2R_4_23410001 chr2R_23410001 RAL-774_125 1143 chr2R 23421043 23421092 chr2R 23421171 23421212 14 120 7.5 3.0 5.2 2.3 169 chr2R 23421043 intergenic CG9815 - chr2R 23421128 intergenic CG9815 - chr2R 23421212 intergenic CG9815 - chr2R_14_23420001 chr2R_23420001 RAL-774_125 1144 chr2R 23508872 23508943 chr2R 23509039 23509099 16 165 0.5 3.0 1.8 5.7 227 chr2R 23508872 intergenic not near genes chr2R 23508986 intergenic not near genes chr2R 23509099 intergenic not near genes chr2R_16_23505001 chr2R_23505001 RAL-774_125 1145 chr2R 23518163 23518211 chr2R 23518291 23518339 9 124 2.5 4.0 3.2 2.1 176 chr2R 23518163 intergenic not near genes chr2R 23518251 intergenic not near genes chr2R 23518339 intergenic not near genes chr2R_9_23515001 chr2R_23515001 RAL-774_125 1146 chr2R 23529532 23529601 chr2R 23537151 23537200 412 10 7614 3.0 2.5 2.8 2.6 7668 chr2R 23529532 exon bw - chr2R 23533366 intron bw - chr2R 23537200 exon bw - chr2R_10_23530001 chr2R_23530001 RAL-774_125 1147 chr2R 23607000 23607188 chr2R 23607126 23607326 23 134 0.0 0.0 0.0 23.0 326 chr2R 23607000 intron CG17664 - chr2R 23607163 intron CG17664 - chr2R 23607326 intron CG17664 - chr2R_23_23605001 chr2R_23605001 RAL-774_125 1148 chr2R 23674157 23674186 chr2R 23674278 23674316 8 125 5.0 6.0 5.5 1.2 159 chr2R 23674157 intron Pde8 + chr2R 23674236 intron Pde8 + chr2R 23674316 exon Pde8 + chr2R_8_23670001 chr2R_23670001 RAL-774_125 1149 chr2R 23722935 23723006 chr2R 23723056 23723119 18 122 2.5 3.5 3.0 4.5 184 chr2R 23722935 intron Sesn + chr2R 23723027 intron Sesn + chr2R 23723119 intron Sesn + chr2R_18_23720001 chr2R_23720001 RAL-774_125 1150 chr2R 23784437 23784499 chr2R 23784565 23784627 11 126 7.5 9.0 8.2 1.2 190 chr2R 23784437 intron CG9850 - chr2R 23784532 intron CG9850 - chr2R 23784627 intron CG9850 - chr2R_11_23780001 chr2R_23780001 RAL-774_125 1151 chr2R 23840150 23840179 chr2R 23844496 23844528 5 4347 22.0 39.5 30.8 0.2 4378 chr2R 23840150 intergenic snoRNA:Psi18S-176 -,CG5549 +,CR44805 + chr2R 23842339 exon shu - chr2R 23844528 exon Snap29 - chr2R_5_23840001 chr2R_23840001 RAL-774_125 1152 chr2R 23840143 23840205 chr2R 23844529 23844564 11 4361 24.0 37.0 30.5 0.3 4421 chr2R 23840143 intergenic snoRNA:Psi18S-176 -,CG5549 +,CR44805 + chr2R 23842354 exon shu - chr2R 23844564 exon Snap29 - chr2R_11_23840001 chr2R_23840001 RAL-774_125 1153 chr2R 23914261 23914310 chr2R 23921923 23921984 412 13 7669 9.5 2.0 5.8 1.9 7723 chr2R 23914261 exon kcc + chr2R 23918122 intron kcc + chr2R 23921984 exon kcc + chr2R_13_23915001 chr2R_23915001 RAL-774_125 1154 chr2R 23986484 23986539 chr2R 23986599 23986669 12 128 6.5 4.5 5.5 1.8 185 chr2R 23986484 intron Phm - chr2R 23986576 intron Phm - chr2R 23986669 intron,5` UTR Phm -,CG30178 + chr2R_12_23985001 chr2R_23985001 RAL-774_125 1155 chr2R 24031347 24031392 chr2R 24031471 24031526 10 132 8.0 3.5 5.8 1.5 179 chr2R 24031347 5` UTR CG30172 - chr2R 24031436 intergenic CG30172 -,Chi - chr2R 24031526 intergenic Chi -,CG30172 - chr2R_10_24030001 chr2R_24030001 RAL-774_125 1156 chr2R 24147028 24147061 chr2R 24154656 24154678 412 6 7625 6.0 2.5 4.2 1.2 7650 chr2R 24147028 intron Dat + chr2R 24150853 intron Dat + chr2R 24154678 intron Dat + chr2R_6_24150001 chr2R_24150001 RAL-774_125 1157 chr2R 24147065 24147090 chr2R 24154652 24154686 412 4 7604 2.5 2.5 2.5 1.1 7621 chr2R 24147065 intron Dat + chr2R 24150876 intron Dat + chr2R 24154686 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-774_125 1158 chr2R 24177193 24177261 chr2R 24184728 24184796 412 18 7534 4.0 7.0 5.5 2.8 7603 chr2R 24177193 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184796 intron Nop60B + chr2R_18_24180001 chr2R_24180001 RAL-774_125 1159 chr2R 24228352 24228399 chr2R 24228477 24228480 7 109 3.0 6.0 4.5 1.3 128 chr2R 24228352 intron CG30419 - chr2R 24228416 intron CG30419 - chr2R 24228480 intron CG30419 - chr2R_7_24225001 chr2R_24225001 RAL-774_125 1160 chr2R 24228404 24228422 chr2R 24228475 24228535 4 82 2.0 6.0 4.0 0.8 131 chr2R 24228404 intron CG30419 - chr2R 24228470 intron CG30419 - chr2R 24228535 intron CG30419 - chr2R_4_24225001 chr2R_24225001 RAL-774_125 1161 chr2R 24278285 24278330 chr2R 24278406 24278458 11 125 3.0 2.5 2.8 2.9 173 chr2R 24278285 intron nvy + chr2R 24278372 intron nvy + chr2R 24278458 intron nvy + chr2R_11_24275001 chr2R_24275001 RAL-774_125 1162 chr2R 24303845 24303882 chr2R 24303979 24304006 11 124 6.0 0.0 3.0 2.8 161 chr2R 24303845 intergenic not near genes chr2R 24303926 intergenic not near genes chr2R 24304006 intergenic not near genes chr2R_11_24300001 chr2R_24300001 RAL-774_125 1163 chr2R 24313341 24313402 chr2R 24313474 24313535 13 132 3.0 6.0 4.5 2.4 194 chr2R 24313341 intergenic betaTub60D + chr2R 24313438 intergenic betaTub60D + chr2R 24313535 intergenic betaTub60D + chr2R_13_24310001 chr2R_24310001 RAL-774_125 1164 chr2R 24336126 24336193 chr2R 24336263 24336330 7 137 5.0 5.5 5.2 1.1 204 chr2R 24336126 intergenic CR44282 - chr2R 24336228 intergenic CR44282 - chr2R 24336330 intergenic CR44282 - chr2R_7_24335001 chr2R_24335001 RAL-774_125 1165 chr2R 24353386 24353411 chr2R 24361798 24361823 roo 8 8409 8.0 6.0 7.0 1.0 8437 chr2R 24353386 intron,intron bs +,CR44811 - chr2R 24357604 intron,intron bs +,CR44811 - chr2R 24361823 intron,intron bs +,CR44811 - chr2R_8_24355001 chr2R_24355001 RAL-774_125 1166 chr2R 24383782 24383843 chr2R 24383912 24383974 11 129 2.5 6.0 4.2 2.1 192 chr2R 24383782 intron mAChR-A - chr2R 24383878 intron mAChR-A - chr2R 24383974 exon mAChR-A - chr2R_11_24380001 chr2R_24380001 RAL-774_125 1167 chr2R 24437134 24437193 chr2R 24437273 24437332 29 135 10.0 4.5 7.2 3.5 198 chr2R 24437134 intergenic not near genes chr2R 24437233 intergenic not near genes chr2R 24437332 intergenic not near genes chr2R_29_24435001 chr2R_24435001 RAL-774_125 1168 chr2R 24493039 24493088 chr2R 24493178 24493227 12 138 3.5 6.0 4.8 2.1 188 chr2R 24493039 intergenic CG13589 -,CG13590 - chr2R 24493133 intergenic CG13590 -,CG13589 - chr2R 24493227 intergenic CG13590 -,CG13589 - chr2R_12_24490001 chr2R_24490001 RAL-774_125 1169 chr2R 24542567 24542625 chr2R 24542704 24542767 10 144 3.5 5.0 4.2 1.9 200 chr2R 24542567 intron,intron CG4622 -,ITP + chr2R 24542667 intron,intron CG4622 -,ITP + chr2R 24542767 intron,intron CG4622 -,ITP + chr2R_10_24540001 chr2R_24540001 RAL-774_125 1170 chr2R 24647552 24647579 chr2R 24655159 24655173 412 8 7603 8.5 6.5 7.5 0.9 7621 chr2R 24647552 intergenic not near genes chr2R 24651362 intergenic not near genes chr2R 24655173 intergenic not near genes chr2R_8_24650001 chr2R_24650001 RAL-774_125 1171 chr2R 24647580 24647613 chr2R 24655155 24655220 412 10 7597 4.5 6.5 5.5 1.5 7640 chr2R 24647580 intergenic not near genes chr2R 24651400 intergenic not near genes chr2R 24655220 intergenic not near genes chr2R_10_24650001 chr2R_24650001 RAL-774_125 1172 chr2R 24727875 24727913 chr2R 24735402 24735466 mdg1 10 7546 1.5 3.5 2.5 2.9 7591 chr2R 24727875 intron Mid1 - chr2R 24731670 intron Mid1 - chr2R 24735466 intron Mid1 - chr2R_10_24730001 chr2R_24730001 RAL-774_125 1173 chr2R 24763574 24763632 chr2R 24765587 24765621 G2 8 2008 3.5 3.0 3.2 1.9 2047 chr2R 24763574 exon CG3894 + chr2R 24764598 intron CG3894 + chr2R 24765621 exon CG3894 + chr2R_8_24760001 chr2R_24760001 RAL-774_125 1174 chr2R 24859796 24859869 chr2R 24859932 24860005 7 130 5.5 0.5 3.0 1.8 209 chr2R 24859796 5` UTR CR44829 + chr2R 24859900 5` UTR CR44829 + chr2R 24860005 5` UTR CR44829 + chr2R_7_24855001 chr2R_24855001 RAL-774_125 1175 chr2R 24884005 24884075 chr2R 24884137 24884207 16 129 6.0 5.0 5.5 2.5 202 chr2R 24884005 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884207 intron NKAIN + chr2R_16_24880001 chr2R_24880001 RAL-774_125 1176 chr2R 25004850 25004922 chr2R 25004978 25005005 18 118 4.5 5.0 4.8 3.1 155 chr2R 25004850 intron zip - chr2R 25004928 intron zip - chr2R 25005005 intron zip - chr2R_18_25000001 chr2R_25000001 RAL-774_125 1177 chr2R 25014505 25014568 chr2R 25014630 25014645 12 114 7.5 10.5 9.0 1.2 140 chr2R 25014505 intron uzip + chr2R 25014575 intron uzip + chr2R 25014645 intron uzip + chr2R_12_25010001 chr2R_25010001 RAL-774_125 1178 chr2R 25018322 25018368 chr2R 25018452 25018493 14 142 5.5 6.0 5.8 2.1 171 chr2R 25018322 intron uzip + chr2R 25018408 intron uzip + chr2R 25018493 intron uzip + chr2R_14_25015001 chr2R_25015001 RAL-774_125 1179 chr2R 25022596 25022673 chr2R 25022730 25022807 23 133 4.0 9.5 6.8 2.9 211 chr2R 25022596 intron uzip + chr2R 25022702 intron uzip + chr2R 25022807 intron uzip + chr2R_23_25020001 chr2R_25020001 RAL-774_125 1180 chr2R 25101227 25101291 chr2R 25101379 25101443 16 149 4.5 6.5 5.5 2.5 216 chr2R 25101227 intron lov - chr2R 25101335 intron lov - chr2R 25101443 intron lov - chr2R_16_25100001 chr2R_25100001 RAL-774_125 1181 chr2R 25122925 25122978 chr2R 25123054 25123102 10 127 5.0 6.5 5.8 1.5 177 chr2R 25122925 intron lov - chr2R 25123014 intron lov - chr2R 25123102 intron lov - chr2R_10_25120001 chr2R_25120001 RAL-774_125 1182 chr2R 25141622 25141673 chr2R 25159356 25159407 roo 11 17734 8.0 8.0 8.0 1.2 17785 chr2R 25141622 intergenic not near genes chr2R 25150514 intergenic not near genes chr2R 25159407 intergenic not near genes chr2R_11_25150001 chr2R_25150001 RAL-774_125 1183 chr2R 25181057 25181118 chr2R 25181201 25181265 15 146 6.0 1.5 3.8 3.1 208 chr2R 25181057 intergenic not near genes chr2R 25181161 intergenic not near genes chr2R 25181265 intergenic not near genes chr2R_15_25180001 chr2R_25180001 RAL-774_125 1184 chr2R 25193303 25193370 chr2R 25193482 25193553 6 188 1.0 2.0 1.5 2.4 250 chr2R 25193303 intron CG9380 - chr2R 25193428 intron CG9380 - chr2R 25193553 intron CG9380 - chr2R_6_25190001 chr2R_25190001 RAL-774_125 1185 chr2R 25235994 25236037 chr2R 25236156 25236192 6 158 3.5 4.5 4.0 1.2 198 chr2R 25235994 intron CG9380 - chr2R 25236093 intron CG9380 - chr2R 25236192 intron CG9380 - chr2R_6_25235001 chr2R_25235001 RAL-774_125 1186 chr2R 25253421 25253461 chr2R 25253535 25253585 7 123 1.5 2.5 2.0 2.3 164 chr2R 25253421 intron,intron CG9380 -,CG30428 + chr2R 25253503 intron,intron CG9380 -,CG30428 + chr2R 25253585 intron,5` UTR CG9380 -,CG30428 + chr2R_7_25250001 chr2R_25250001 RAL-774_125 1187 chr3L 51353 51406 chr3L 51491 51554 12 144 10.5 6.0 8.2 1.3 201 chr3L 51353 intergenic not near genes chr3L 51454 intergenic not near genes chr3L 51554 intergenic not near genes chr3L_12_50001 chr3L_50001 RAL-774_125 1188 chr3L 110173 110242 chr3L 119390 119414 roo 13 9213 4.5 4.0 4.2 2.5 9241 chr3L 110173 intergenic not near genes chr3L 114794 intergenic not near genes chr3L 119414 intergenic not near genes chr3L_13_110001 chr3L_110001 RAL-774_125 1189 chr3L 274196 274260 chr3L 274331 274390 7 130 4.0 2.5 3.2 1.7 194 chr3L 274196 exon miple2 + chr3L 274293 intron miple2 + chr3L 274390 intron miple2 + chr3L_7_270001 chr3L_270001 RAL-774_125 1190 chr3L 343150 343176 chr3L 343323 343344 5 172 11.5 7.5 9.5 0.5 194 chr3L 343150 intron Ptpmeg + chr3L 343247 intron Ptpmeg + chr3L 343344 intron Ptpmeg + chr3L_5_340001 chr3L_340001 RAL-774_125 1191 chr3L 375203 375277 chr3L 375334 375400 11 130 3.0 5.0 4.0 2.2 197 chr3L 375203 intron trh - chr3L 375302 intron trh - chr3L 375400 intron trh - chr3L_11_375001 chr3L_375001 RAL-774_125 1192 chr3L 402658 402708 chr3L 409742 409800 297 13 7092 3.5 4.0 3.8 2.7 7142 chr3L 402658 intergenic not near genes chr3L 406229 intergenic not near genes chr3L 409800 intergenic not near genes chr3L_13_405001 chr3L_405001 RAL-774_125 1193 chr3L 421014 421075 chr3L 421160 421181 12 138 3.5 6.5 5.0 2.0 167 chr3L 421014 intergenic not near genes chr3L 421098 intergenic not near genes chr3L 421181 intergenic not near genes chr3L_12_420001 chr3L_420001 RAL-774_125 1194 chr3L 428149 428222 chr3L 428319 428359 5 157 2.0 0.0 1.0 2.5 210 chr3L 428149 intergenic not near genes chr3L 428254 intergenic not near genes chr3L 428359 intergenic not near genes chr3L_5_425001 chr3L_425001 RAL-774_125 1195 chr3L 445533 445578 chr3L 445659 445707 11 124 3.5 5.0 4.2 2.1 174 chr3L 445533 exon klar - chr3L 445620 intron klar - chr3L 445707 intron klar - chr3L_11_445001 chr3L_445001 RAL-774_125 1196 chr3L 456202 456232 chr3L 456299 456361 8 122 3.5 3.0 3.2 1.9 159 chr3L 456202 intron klar - chr3L 456282 intron klar - chr3L 456361 intron klar - chr3L_8_455001 chr3L_455001 RAL-774_125 1197 chr3L 477843 477876 chr3L 477976 478009 7 131 4.5 0.0 2.2 2.2 166 chr3L 477843 intron klar - chr3L 477926 intron klar - chr3L 478009 intron klar - chr3L_7_475001 chr3L_475001 RAL-774_125 1198 chr3L 642431 642486 chr3L 642572 642626 8 136 10.0 6.5 8.2 0.9 195 chr3L 642431 5` UTR CR43334 + chr3L 642528 5` UTR CR43334 + chr3L 642626 5` UTR CR43334 + chr3L_8_640001 chr3L_640001 RAL-774_125 1199 chr3L 646759 646798 chr3L 646887 646921 4 124 4.5 0.0 2.2 1.2 162 chr3L 646759 intergenic not near genes chr3L 646840 intergenic not near genes chr3L 646921 intergenic not near genes chr3L_4_645001 chr3L_645001 RAL-774_125 1200 chr3L 665818 665864 chr3L 665951 665994 7 128 4.5 3.5 4.0 1.4 176 chr3L 665818 intergenic not near genes chr3L 665906 intergenic not near genes chr3L 665994 intergenic not near genes chr3L_7_665001 chr3L_665001 RAL-774_125 1201 chr3L 732807 732847 chr3L 733064 733119 7 267 2.5 5.5 4.0 1.4 312 chr3L 732807 intergenic not near genes chr3L 732963 intergenic not near genes chr3L 733119 intergenic not near genes chr3L_7_730001 chr3L_730001 RAL-774_125 1202 chr3L 789429 789474 chr3L 789758 789803 5 334 3.0 0.5 1.8 1.8 374 chr3L 789429 intergenic not near genes chr3L 789616 intergenic not near genes chr3L 789803 intergenic not near genes chr3L_5_785001 chr3L_785001 RAL-774_125 1203 chr3L 789870 789944 chr3L 790405 790459 roo 4 529 1.0 0.5 0.8 2.2 589 chr3L 789870 intergenic not near genes chr3L 790164 intergenic not near genes chr3L 790459 intergenic not near genes chr3L_4_790001 chr3L_790001 RAL-774_125 1204 chr3L 821047 821080 chr3L 821174 821196 6 121 8.0 7.0 7.5 0.7 149 chr3L 821047 5` UTR CR43883 + chr3L 821122 5` UTR CR43883 + chr3L 821196 5` UTR CR43883 + chr3L_6_820001 chr3L_820001 RAL-774_125 1205 chr3L 824002 824044 chr3L 824124 824171 6 128 2.0 0.5 1.2 2.7 169 chr3L 824002 intergenic not near genes chr3L 824086 intergenic not near genes chr3L 824171 intergenic not near genes chr3L_6_820001 chr3L_820001 RAL-774_125 1206 chr3L 854148 854204 chr3L 854266 854332 10 124 3.5 1.5 2.5 2.9 184 chr3L 854148 intron dpr20 - chr3L 854240 intron dpr20 - chr3L 854332 exon dpr20 - chr3L_10_850001 chr3L_850001 RAL-774_125 1207 chr3L 857963 858023 chr3L 866484 866554 Tirant 5 8516 6.5 5.5 6.0 0.7 8591 chr3L 857963 intergenic not near genes chr3L 862258 intergenic not near genes chr3L 866554 5` UTR CG12502 + chr3L_5_860001 chr3L_860001 RAL-774_125 1208 chr3L 899996 900016 chr3L 900128 900143 8 132 0.5 12.5 6.5 1.1 147 chr3L 899996 intergenic not near genes chr3L 900070 intergenic not near genes chr3L 900143 intergenic not near genes chr3L_8_900001 chr3L_900001 RAL-774_125 1209 chr3L 922120 922175 chr3L 922247 922307 11 127 3.0 4.0 3.5 2.4 187 chr3L 922120 intron Glut1 + chr3L 922214 intron Glut1 + chr3L 922307 intron Glut1 + chr3L_11_920001 chr3L_920001 RAL-774_125 1210 chr3L 925134 925197 chr3L 932610 932673 mdg1 13 7475 6.5 2.0 4.2 2.5 7539 chr3L 925134 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932673 intron Glut1 + chr3L_13_925001 chr3L_925001 RAL-774_125 1211 chr3L 933871 933943 chr3L 934020 934086 14 149 3.5 5.0 4.2 2.7 215 chr3L 933871 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934086 intron Glut1 + chr3L_14_930001 chr3L_930001 RAL-774_125 1212 chr3L 939740 939789 chr3L 940906 940960 jockey 10 1169 3.5 7.5 5.5 1.5 1220 chr3L 939740 intron Glut1 + chr3L 940350 intron Glut1 + chr3L 940960 intron Glut1 + chr3L_10_940001 chr3L_940001 RAL-774_125 1213 chr3L 960990 961028 chr3L 961133 961171 10 143 2.0 3.5 2.8 2.6 181 chr3L 960990 intron Glut1 + chr3L 961080 intron Glut1 + chr3L 961171 intron Glut1 + chr3L_10_960001 chr3L_960001 RAL-774_125 1214 chr3L 1008467 1008499 chr3L 1008593 1008620 9 123 7.0 5.5 6.2 1.2 153 chr3L 1008467 intron trio - chr3L 1008544 intron trio - chr3L 1008620 intron trio - chr3L_9_1005001 chr3L_1005001 RAL-774_125 1215 chr3L 1008500 1008528 chr3L 1008580 1008654 16 120 2.0 5.5 3.8 3.3 154 chr3L 1008500 intron trio - chr3L 1008577 intron trio - chr3L 1008654 intron trio - chr3L_16_1005001 chr3L_1005001 RAL-774_125 1216 chr3L 1014983 1015051 chr3L 1015145 1015188 9 145 6.5 4.5 5.5 1.4 205 chr3L 1014983 intron trio - chr3L 1015086 intron trio - chr3L 1015188 intron trio - chr3L_9_1015001 chr3L_1015001 RAL-774_125 1217 chr3L 1031559 1031606 chr3L 1031652 1031715 9 112 2.5 2.5 2.5 2.6 156 chr3L 1031559 intron trio - chr3L 1031637 intron trio - chr3L 1031715 intron trio - chr3L_9_1030001 chr3L_1030001 RAL-774_125 1218 chr3L 1040504 1040569 chr3L 1040632 1040703 13 133 3.0 4.0 3.5 2.9 199 chr3L 1040504 intron bab1 - chr3L 1040604 intron bab1 - chr3L 1040703 intron bab1 - chr3L_13_1040001 chr3L_1040001 RAL-774_125 1219 chr3L 1047323 1047385 chr3L 1055164 1055219 412 9 7834 1.5 4.5 3.0 2.2 7896 chr3L 1047323 intron bab1 - chr3L 1051271 intron bab1 - chr3L 1055219 intron bab1 - chr3L_9_1050001 chr3L_1050001 RAL-774_125 1220 chr3L 1109597 1109658 chr3L 1109721 1109780 15 130 3.0 9.0 6.0 2.1 183 chr3L 1109597 intergenic not near genes chr3L 1109688 intergenic not near genes chr3L 1109780 intergenic not near genes chr3L_15_1105001 chr3L_1105001 RAL-774_125 1221 chr3L 1145190 1145268 chr3L 1145319 1145400 7 126 1.5 0.0 0.8 3.9 210 chr3L 1145190 intron bab2 - chr3L 1145295 intron bab2 - chr3L 1145400 intron bab2 - chr3L_7_1145001 chr3L_1145001 RAL-774_125 1222 chr3L 1154084 1154157 chr3L 1163284 1163347 roo 11 9196 4.5 1.5 3.0 2.8 9263 chr3L 1154084 intron bab2 - chr3L 1158716 intron bab2 - chr3L 1163347 intron bab2 - chr3L_11_1155001 chr3L_1155001 RAL-774_125 1223 chr3L 1219558 1219602 chr3L 1227335 1227375 412 12 7768 9.0 8.0 8.5 1.3 7817 chr3L 1219558 intron mwh + chr3L 1223466 intron mwh + chr3L 1227375 intron mwh + chr3L_12_1220001 chr3L_1220001 RAL-774_125 1224 chr3L 1310987 1311050 chr3L 1315799 1315866 9 4817 26.5 37.5 32.0 0.3 4879 chr3L 1310987 exon CG2469 + chr3L 1313426 intergenic CG9186 -,CG9153 + chr3L 1315866 exon CG9153 + chr3L_9_1310001 chr3L_1310001 RAL-774_125 1225 chr3L 1324609 1324649 chr3L 1324727 1324767 9 123 3.5 4.0 3.8 1.9 158 chr3L 1324609 intron Myo61F + chr3L 1324688 intron Myo61F + chr3L 1324767 intron Myo61F + chr3L_9_1320001 chr3L_1320001 RAL-774_125 1226 chr3L 1389952 1389997 chr3L 1390074 1390120 7 122 1.5 3.0 2.2 2.2 168 chr3L 1389952 intron Ptp61F - chr3L 1390036 intron Ptp61F - chr3L 1390120 intron Ptp61F - chr3L_7_1390001 chr3L_1390001 RAL-774_125 1227 chr3L 1396706 1396753 chr3L 1396836 1396854 14 124 6.5 6.5 6.5 1.9 148 chr3L 1396706 intron Ptp61F - chr3L 1396780 intron Ptp61F - chr3L 1396854 intron Ptp61F - chr3L_14_1395001 chr3L_1395001 RAL-774_125 1228 chr3L 1415710 1415759 chr3L 1415861 1415905 9 141 4.0 4.0 4.0 1.8 195 chr3L 1415710 intron Ptp61F - chr3L 1415808 intron Ptp61F - chr3L 1415905 intron Ptp61F - chr3L_9_1415001 chr3L_1415001 RAL-774_125 1229 chr3L 1424759 1424772 chr3L 1430023 1430066 Rt1a 6 5284 1.0 6.5 3.8 1.2 5307 chr3L 1424759 intron Ptp61F - chr3L 1427412 intron Ptp61F - chr3L 1430066 intron Ptp61F - chr3L_6_1425001 chr3L_1425001 RAL-774_125 1230 chr3L 1479932 1479977 chr3L 1480131 1480178 9 199 3.5 4.5 4.0 1.8 246 chr3L 1479932 intron stet - chr3L 1480055 intron stet - chr3L 1480178 intron stet - chr3L_9_1480001 chr3L_1480001 RAL-774_125 1231 chr3L 1485716 1485726 chr3L 1486931 1486943 1360 4 1215 4.0 8.5 6.2 0.6 1227 chr3L 1485716 intron stet - chr3L 1486330 intron stet - chr3L 1486943 intron stet - chr3L_4_1485001 chr3L_1485001 RAL-774_125 1232 chr3L 1505961 1506026 chr3L 1513608 1513653 17.6 13 7644 7.0 4.0 5.5 2.0 7692 chr3L 1505961 intron,intron Psa +,cue - chr3L 1509807 intron,intron Psa +,cue - chr3L 1513653 intron,intron Psa +,cue - chr3L_13_1505001 chr3L_1505001 RAL-774_125 1233 chr3L 1571453 1571495 chr3L 1571588 1571630 9 133 3.0 8.5 5.8 1.3 177 chr3L 1571453 intron CG12004 + chr3L 1571542 intron CG12004 + chr3L 1571630 intron CG12004 + chr3L_9_1570001 chr3L_1570001 RAL-774_125 1234 chr3L 1585881 1585926 chr3L 1586014 1586059 4 133 5.0 0.0 2.5 1.1 178 chr3L 1585881 intron CG13917 + chr3L 1585970 intron CG13917 + chr3L 1586059 intron CG13917 + chr3L_4_1585001 chr3L_1585001 RAL-774_125 1235 chr3L 1688200 1688244 chr3L 1688378 1688423 5 178 4.5 1.0 2.8 1.3 223 chr3L 1688200 intron CG7991 + chr3L 1688312 intron CG7991 + chr3L 1688423 intron CG7991 + chr3L_5_1685001 chr3L_1685001 RAL-774_125 1236 chr3L 1728478 1728547 chr3L 1728612 1728670 19 131 5.0 6.0 5.5 2.9 192 chr3L 1728478 intron drpr - chr3L 1728574 intron drpr - chr3L 1728670 intron drpr - chr3L_19_1725001 chr3L_1725001 RAL-774_125 1237 chr3L 1740831 1740874 chr3L 1741111 1741157 pogo 9 285 5.0 2.5 3.8 1.9 326 chr3L 1740831 intron Gk + chr3L 1740994 intron Gk + chr3L 1741157 intron Gk + chr3L_9_1740001 chr3L_1740001 RAL-774_125 1238 chr3L 1754646 1754718 chr3L 1754815 1754860 24 163 4.0 5.5 4.8 4.1 214 chr3L 1754646 intron Cht2 - chr3L 1754753 intron Cht2 - chr3L 1754860 intron Cht2 - chr3L_24_1750001 chr3L_1750001 RAL-774_125 1239 chr3L 1841536 1841582 chr3L 1841671 1841716 11 131 4.5 6.0 5.2 1.8 180 chr3L 1841536 intron Cpr62Bc - chr3L 1841626 intron Cpr62Bc - chr3L 1841716 intron Cpr62Bc - chr3L_11_1840001 chr3L_1840001 RAL-774_125 1240 chr3L 1853026 1853052 chr3L 1853153 1853179 5 127 2.5 8.0 5.2 0.8 153 chr3L 1853026 intron CG13936 - chr3L 1853102 intron CG13936 - chr3L 1853179 intron CG13936 - chr3L_5_1850001 chr3L_1850001 RAL-774_125 1241 chr3L 1879090 1879130 chr3L 1879218 1879248 8 126 3.5 0.0 1.8 2.9 158 chr3L 1879090 intron CG13937 - chr3L 1879169 intron CG13937 - chr3L 1879248 intron CG13937 - chr3L_8_1875001 chr3L_1875001 RAL-774_125 1242 chr3L 1885109 1885177 chr3L 1885235 1885307 9 125 0.0 5.5 2.8 2.4 198 chr3L 1885109 intergenic Aprt - chr3L 1885208 intergenic Aprt -,Tmhs + chr3L 1885307 intergenic Aprt -,Tmhs + chr3L_9_1885001 chr3L_1885001 RAL-774_125 1243 chr3L 1922406 1922452 chr3L 1922536 1922559 7 120 3.5 4.5 4.0 1.4 153 chr3L 1922406 intron Dbx + chr3L 1922482 intron Dbx + chr3L 1922559 intron Dbx + chr3L_7_1920001 chr3L_1920001 RAL-774_125 1244 chr3L 2108201 2108252 chr3L 2113455 2113506 copia 6 5252 5.5 4.5 5.0 1.0 5305 chr3L 2108201 intron sls - chr3L 2110854 intron sls - chr3L 2113506 intron sls - chr3L_6_2110001 chr3L_2110001 RAL-774_125 1245 chr3L 2139164 2139228 chr3L 2139295 2139349 19 129 4.0 3.5 3.8 4.0 185 chr3L 2139164 intron zormin - chr3L 2139256 intron zormin - chr3L 2139349 intron zormin - chr3L_19_2135001 chr3L_2135001 RAL-774_125 1246 chr3L 2163918 2163983 chr3L 2164065 2164225 8 166 2.5 1.0 1.8 2.9 307 chr3L 2163918 intergenic CG15822 - chr3L 2164072 intergenic CG15822 - chr3L 2164225 intergenic CG15822 - chr3L_8_2160001 chr3L_2160001 RAL-774_125 1247 chr3L 2168739 2168799 chr3L 2168880 2168934 17 139 2.0 4.5 3.2 4.0 195 chr3L 2168739 exon CG15879 - chr3L 2168836 intron CG15879 - chr3L 2168934 intron CG15879 - chr3L_17_2165001 chr3L_2165001 RAL-774_125 1248 chr3L 2199759 2199818 chr3L 2199885 2199944 12 122 5.5 3.5 4.5 2.2 185 chr3L 2199759 intergenic not near genes chr3L 2199852 intergenic not near genes chr3L 2199944 intergenic not near genes chr3L_12_2195001 chr3L_2195001 RAL-774_125 1249 chr3L 2287648 2287694 chr3L 2287812 2287858 11 158 1.5 12.0 6.8 1.4 210 chr3L 2287648 intron MsR2 + chr3L 2287753 intron MsR2 + chr3L 2287858 intron MsR2 + chr3L_11_2285001 chr3L_2285001 RAL-774_125 1250 chr3L 2307960 2308022 chr3L 2308115 2308177 5 153 4.0 3.0 3.5 1.1 217 chr3L 2307960 intergenic not near genes chr3L 2308068 intergenic not near genes chr3L 2308177 intergenic not near genes chr3L_5_2305001 chr3L_2305001 RAL-774_125 1251 chr3L 2321133 2321191 chr3L 2321260 2321283 10 120 6.0 5.5 5.8 1.5 150 chr3L 2321133 intergenic not near genes chr3L 2321208 intergenic not near genes chr3L 2321283 intergenic not near genes chr3L_10_2320001 chr3L_2320001 RAL-774_125 1252 chr3L 2331559 2331597 chr3L 2331686 2331724 15 123 5.0 13.0 9.0 1.5 165 chr3L 2331559 intron MsR1 + chr3L 2331642 intron MsR1 + chr3L 2331724 intron MsR1 + chr3L_15_2330001 chr3L_2330001 RAL-774_125 1253 chr3L 2357792 2357839 chr3L 2357918 2357960 10 123 6.0 4.0 5.0 1.7 168 chr3L 2357792 intergenic not near genes chr3L 2357876 intergenic not near genes chr3L 2357960 intergenic not near genes chr3L_10_2355001 chr3L_2355001 RAL-774_125 1254 chr3L 2382679 2382727 chr3L 2382789 2382859 6 121 6.0 6.0 6.0 0.9 180 chr3L 2382679 intergenic not near genes chr3L 2382769 intergenic not near genes chr3L 2382859 intergenic not near genes chr3L_6_2380001 chr3L_2380001 RAL-774_125 1255 chr3L 2447481 2447525 chr3L 2456672 2456726 roo 10 9195 5.0 6.5 5.8 1.5 9245 chr3L 2447481 intron CG45186 + chr3L 2452104 intron CG45186 + chr3L 2456726 intron CG45186 + chr3L_10_2450001 chr3L_2450001 RAL-774_125 1256 chr3L 2474537 2474611 chr3L 2474682 2474755 10 142 4.0 3.5 3.8 2.1 218 chr3L 2474537 intron CG45186 + chr3L 2474646 intron CG45186 + chr3L 2474755 intron,3` UTR CG45186 +,CG16762 - chr3L_10_2470001 chr3L_2470001 RAL-774_125 1257 chr3L 2493772 2493850 chr3L 2493900 2493988 12 132 4.0 0.0 2.0 4.0 216 chr3L 2493772 intron CG45186 + chr3L 2493880 intron CG45186 + chr3L 2493988 intron CG45186 + chr3L_12_2490001 chr3L_2490001 RAL-774_125 1258 chr3L 2515368 2515411 chr3L 2515505 2515542 6 136 3.5 7.0 5.2 1.0 174 chr3L 2515368 intron Spn - chr3L 2515455 intron Spn - chr3L 2515542 intron Spn - chr3L_6_2515001 chr3L_2515001 RAL-774_125 1259 chr3L 2533632 2533668 chr3L 2533740 2533795 9 113 6.0 8.0 7.0 1.1 163 chr3L 2533632 intron Spn - chr3L 2533714 intron Spn - chr3L 2533795 intron Spn - chr3L_9_2530001 chr3L_2530001 RAL-774_125 1260 chr3L 2546717 2546791 chr3L 2546856 2546930 9 138 2.0 2.0 2.0 3.0 213 chr3L 2546717 intron Spn - chr3L 2546824 intron Spn - chr3L 2546930 intron Spn - chr3L_9_2545001 chr3L_2545001 RAL-774_125 1261 chr3L 2581847 2581913 chr3L 2581991 2582057 14 141 4.5 2.5 3.5 3.1 210 chr3L 2581847 intron msn - chr3L 2581952 intron msn - chr3L 2582057 intron msn - chr3L_14_2580001 chr3L_2580001 RAL-774_125 1262 chr3L 2683909 2683975 chr3L 2684029 2684101 8 124 2.5 3.5 3.0 2.0 192 chr3L 2683909 intron Fife - chr3L 2684005 intron Fife - chr3L 2684101 intron Fife - chr3L_8_2680001 chr3L_2680001 RAL-774_125 1263 chr3L 2702008 2702081 chr3L 2702349 2702421 12 343 2.5 3.0 2.8 3.2 413 chr3L 2702008 intron Fife - chr3L 2702214 intron Fife - chr3L 2702421 intron Fife - chr3L_12_2700001 chr3L_2700001 RAL-774_125 1264 chr3L 2731475 2731543 chr3L 2731607 2731675 12 126 2.5 3.5 3.0 3.0 200 chr3L 2731475 intron Mrtf - chr3L 2731575 intron Mrtf - chr3L 2731675 intron Mrtf - chr3L_12_2730001 chr3L_2730001 RAL-774_125 1265 chr3L 2751419 2751449 chr3L 2755758 2755789 F-element 12 4344 2.5 6.5 4.5 2.2 4370 chr3L 2751419 intron Mrtf - chr3L 2753604 intron Mrtf - chr3L 2755789 intron Mrtf - chr3L_12_2750001 chr3L_2750001 RAL-774_125 1266 chr3L 2835847 2835870 chr3L 2835971 2835994 4 125 7.5 3.5 5.5 0.6 147 chr3L 2835847 intron CG43444 - chr3L 2835920 intron CG43444 - chr3L 2835994 intron CG43444 - chr3L_4_2835001 chr3L_2835001 RAL-774_125 1267 chr3L 2854469 2854504 chr3L 2854572 2854602 4 112 1.5 2.5 2.0 1.3 133 chr3L 2854469 intron CG43444 - chr3L 2854536 intron CG43444 - chr3L 2854602 intron CG43444 - chr3L_4_2850001 chr3L_2850001 RAL-774_125 1268 chr3L 2927822 2927865 chr3L 2936148 2936185 Tirant 12 8322 3.5 8.5 6.0 1.7 8363 chr3L 2927822 intron Shab + chr3L 2932004 intron Shab + chr3L 2936185 intron Shab + chr3L_12_2930001 chr3L_2930001 RAL-774_125 1269 chr3L 3021438 3021484 chr3L 3021584 3021633 7 145 1.0 5.5 3.2 1.7 195 chr3L 3021438 intergenic not near genes chr3L 3021536 intergenic not near genes chr3L 3021633 intergenic not near genes chr3L_7_3020001 chr3L_3020001 RAL-774_125 1270 chr3L 3050848 3050878 chr3L 3050985 3051015 4 137 4.0 4.5 4.2 0.8 167 chr3L 3050848 intron CG32485 + chr3L 3050932 intron CG32485 + chr3L 3051015 exon CG32485 + chr3L_4_3050001 chr3L_3050001 RAL-774_125 1271 chr3L 3051739 3051754 chr3L 3052034 3052049 pogo 6 295 3.5 7.5 5.5 0.9 310 chr3L 3051739 3` UTR CG32485 + chr3L 3051894 intergenic CG32485 + chr3L 3052049 intergenic CG32485 +,CG1271 + chr3L_6_3050001 chr3L_3050001 RAL-774_125 1272 chr3L 3057206 3057273 chr3L 3057400 3057467 14 193 2.0 6.0 4.0 2.8 261 chr3L 3057206 exon CG32486 - chr3L 3057336 intron CG32486 - chr3L 3057467 exon CG32486 - chr3L_14_3055001 chr3L_3055001 RAL-774_125 1273 chr3L 3061262 3061315 chr3L 3069871 3069912 Tirant 8 8618 2.5 3.5 3.0 2.0 8650 chr3L 3061262 intron CG32486 - chr3L 3065587 intron CG32486 - chr3L 3069912 intron CG32486 - chr3L_8_3065001 chr3L_3065001 RAL-774_125 1274 chr3L 3247579 3247606 chr3L 3247711 3247735 8 131 5.0 8.0 6.5 1.1 156 chr3L 3247579 intergenic CG43389 + chr3L 3247657 intergenic CG43389 + chr3L 3247735 intergenic CG43389 + chr3L_8_3245001 chr3L_3245001 RAL-774_125 1275 chr3L 3252307 3252357 chr3L 3252433 3252483 5 126 3.0 4.0 3.5 1.1 176 chr3L 3252307 5` UTR CR43626 + chr3L 3252395 5` UTR CR43626 + chr3L 3252483 5` UTR CR43626 + chr3L_5_3250001 chr3L_3250001 RAL-774_125 1276 chr3L 3281418 3281454 chr3L 3281939 3281957 Doc 7 532 7.0 8.5 7.8 0.8 539 chr3L 3281418 intron CG12017 + chr3L 3281688 intron CG12017 + chr3L 3281957 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-774_125 1277 chr3L 3317510 3317560 chr3L 3317639 3317689 15 126 1.0 8.5 4.8 2.6 179 chr3L 3317510 intergenic Drsl5 + chr3L 3317600 intergenic PIG-C -,Drsl5 + chr3L 3317689 intergenic PIG-C - chr3L_15_3315001 chr3L_3315001 RAL-774_125 1278 chr3L 3341222 3341295 chr3L 3341352 3341425 15 129 2.5 5.0 3.8 3.1 203 chr3L 3341222 intron kst + chr3L 3341324 intron kst + chr3L 3341425 intron kst + chr3L_15_3340001 chr3L_3340001 RAL-774_125 1279 chr3L 3449222 3449231 chr3L 3449350 3449359 4 128 8.5 2.0 5.2 0.6 137 chr3L 3449222 intron eIF5B - chr3L 3449290 intron eIF5B - chr3L 3449359 intron eIF5B - chr3L_4_3445001 chr3L_3445001 RAL-774_125 1280 chr3L 3470134 3470184 chr3L 3470253 3470310 7 124 1.0 3.5 2.2 2.2 176 chr3L 3470134 intron CG14971 - chr3L 3470222 intron CG14971 - chr3L 3470310 intron CG14971 - chr3L_7_3470001 chr3L_3470001 RAL-774_125 1281 chr3L 3475059 3475087 chr3L 3475524 3475547 jockey 5 475 5.0 4.0 4.5 0.9 488 chr3L 3475059 intron CG42324 + chr3L 3475303 intron CG42324 + chr3L 3475547 intron CG42324 + chr3L_5_3475001 chr3L_3475001 RAL-774_125 1282 chr3L 3494164 3494208 chr3L 3494291 3494335 7 126 0.0 7.0 3.5 1.6 171 chr3L 3494164 intron CG42324 + chr3L 3494250 intron CG42324 + chr3L 3494335 intron CG42324 + chr3L_7_3490001 chr3L_3490001 RAL-774_125 1283 chr3L 3512935 3512979 chr3L 3513049 3513109 8 126 6.0 7.0 6.5 1.1 174 chr3L 3512935 intergenic ImpE2 - chr3L 3513022 intergenic ImpE2 - chr3L 3513109 intergenic ImpE2 - chr3L_8_3510001 chr3L_3510001 RAL-774_125 1284 chr3L 3574757 3574834 chr3L 3575067 3575079 11 302 5.0 4.0 4.5 2.0 322 chr3L 3574757 intron Eip63E + chr3L 3574918 intron Eip63E + chr3L 3575079 intron Eip63E + chr3L_11_3570001 chr3L_3570001 RAL-774_125 1285 chr3L 3577699 3577757 chr3L 3577815 3577878 9 124 7.5 6.5 7.0 1.1 179 chr3L 3577699 intron Eip63E + chr3L 3577788 intron Eip63E + chr3L 3577878 intron Eip63E + chr3L_9_3575001 chr3L_3575001 RAL-774_125 1286 chr3L 3593850 3593876 chr3L 3593985 3594006 8 132 3.5 0.0 1.8 2.9 156 chr3L 3593850 intron,5` UTR Eip63E +,snRNA:U7 + chr3L 3593928 intron Eip63E + chr3L 3594006 intron Eip63E + chr3L_8_3590001 chr3L_3590001 RAL-774_125 1287 chr3L 3601263 3601323 chr3L 3606622 3606668 copia 20 5357 3.5 6.5 5.0 3.3 5405 chr3L 3601263 intron Eip63E + chr3L 3603966 intron Eip63E + chr3L 3606668 intron Eip63E + chr3L_20_3600001 chr3L_3600001 RAL-774_125 1288 chr3L 3691255 3691276 chr3L 3691403 3691419 6 147 2.5 0.0 1.2 2.7 164 chr3L 3691255 intergenic not near genes chr3L 3691337 intergenic not near genes chr3L 3691419 intergenic not near genes chr3L_6_3690001 chr3L_3690001 RAL-774_125 1289 chr3L 3766697 3766747 chr3L 3766833 3766883 7 132 6.0 0.5 3.2 1.7 186 chr3L 3766697 intron CG32264 - chr3L 3766790 intron CG32264 - chr3L 3766883 intron CG32264 - chr3L_7_3765001 chr3L_3765001 RAL-774_125 1290 chr3L 3771895 3771919 chr3L 3772023 3772037 5 124 3.0 8.5 5.8 0.7 142 chr3L 3771895 intron CG32264 - chr3L 3771966 intron CG32264 - chr3L 3772037 intron CG32264 - chr3L_5_3770001 chr3L_3770001 RAL-774_125 1291 chr3L 3795560 3795610 chr3L 3795678 3795737 7 123 5.5 5.0 5.2 1.1 177 chr3L 3795560 intron CG32264 - chr3L 3795648 intron CG32264 - chr3L 3795737 intron CG32264 - chr3L_7_3795001 chr3L_3795001 RAL-774_125 1292 chr3L 3797193 3797262 chr3L 3797326 3797390 15 132 0.0 5.0 2.5 4.3 197 chr3L 3797193 intron CG32264 - chr3L 3797292 intron CG32264 - chr3L 3797390 intron CG32264 - chr3L_15_3795001 chr3L_3795001 RAL-774_125 1293 chr3L 3798007 3798054 chr3L 3798126 3798131 16 121 7.0 6.5 6.8 2.1 124 chr3L 3798007 intron CG32264 - chr3L 3798069 intron CG32264 - chr3L 3798131 intron CG32264 - chr3L_16_3795001 chr3L_3795001 RAL-774_125 1294 chr3L 3815008 3815042 chr3L 3815138 3815169 7 130 9.5 7.5 8.5 0.7 161 chr3L 3815008 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815088 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815169 intron,intron Scsalpha +,CR43932 - chr3L_7_3815001 chr3L_3815001 RAL-774_125 1295 chr3L 3833703 3833764 chr3L 3833983 3834040 pogo 7 284 5.0 3.0 4.0 1.4 337 chr3L 3833703 intron enc + chr3L 3833872 intron enc + chr3L 3834040 intron enc + chr3L_7_3830001 chr3L_3830001 RAL-774_125 1296 chr3L 3877387 3877468 chr3L 3877562 3877641 7 171 0.5 1.0 0.8 3.9 254 chr3L 3877387 intergenic not near genes chr3L 3877514 intergenic not near genes chr3L 3877641 intergenic not near genes chr3L_7_3875001 chr3L_3875001 RAL-774_125 1297 chr3L 3889105 3889137 chr3L 3889228 3889270 11 132 4.0 5.0 4.5 2.0 165 chr3L 3889105 intergenic not near genes chr3L 3889188 intergenic not near genes chr3L 3889270 intergenic not near genes chr3L_11_3885001 chr3L_3885001 RAL-774_125 1298 chr3L 3912751 3912796 chr3L 3912888 3912938 5 140 3.5 0.5 2.0 1.7 187 chr3L 3912751 intron Eip63F-1 - chr3L 3912844 intron Eip63F-1 - chr3L 3912938 intron Eip63F-1 - chr3L_5_3910001 chr3L_3910001 RAL-774_125 1299 chr3L 3921344 3921415 chr3L 3921658 3921723 12 309 3.0 2.5 2.8 3.2 379 chr3L 3921344 intron Eip63F-1 - chr3L 3921534 intron Eip63F-1 - chr3L 3921723 intron Eip63F-1 - chr3L_12_3920001 chr3L_3920001 RAL-774_125 1300 chr3L 3935809 3935843 chr3L 3935937 3935971 8 127 0.0 0.5 0.2 6.7 162 chr3L 3935809 5` UTR Eip63F-2 + chr3L 3935890 5` UTR Eip63F-2 + chr3L 3935971 5` UTR Eip63F-2 + chr3L_8_3935001 chr3L_3935001 RAL-774_125 1301 chr3L 3967995 3968052 chr3L 3968124 3968181 11 128 3.0 3.0 3.0 2.8 186 chr3L 3967995 intergenic not near genes chr3L 3968088 intergenic not near genes chr3L 3968181 intergenic not near genes chr3L_11_3965001 chr3L_3965001 RAL-774_125 1302 chr3L 4238703 4238731 chr3L 4238848 4238876 5 148 2.0 0.0 1.0 2.5 173 chr3L 4238703 intergenic not near genes chr3L 4238790 intergenic not near genes chr3L 4238876 intergenic not near genes chr3L_5_4235001 chr3L_4235001 RAL-774_125 1303 chr3L 4328697 4328757 chr3L 4336241 4336300 412 8 7540 2.5 3.5 3.0 2.0 7603 chr3L 4328697 intron Cip4 - chr3L 4332498 intron Cip4 - chr3L 4336300 exon Cip4 - chr3L_8_4330001 chr3L_4330001 RAL-774_125 1304 chr3L 4341330 4341333 chr3L 21448026 21448027 4 17106695 17.5 17.0 17.2 0.2 17106697 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_4_12890001 chr3L_12890001 RAL-774_125 1305 chr3L 4342379 4342438 chr3L 4342491 4342552 15 112 5.0 6.5 5.8 2.2 173 chr3L 4342379 intron Cip4 - chr3L 4342466 intron Cip4 - chr3L 4342552 intron Cip4 - chr3L_15_4340001 chr3L_4340001 RAL-774_125 1306 chr3L 4344895 4344906 chr3L 4345040 4345051 4 145 2.5 0.0 1.2 1.8 156 chr3L 4344895 intron Cip4 - chr3L 4344973 intron Cip4 - chr3L 4345051 intron Cip4 - chr3L_4_4340001 chr3L_4340001 RAL-774_125 1307 chr3L 4385609 4385655 chr3L 4385752 4385788 6 137 5.0 9.5 7.2 0.7 179 chr3L 4385609 intron slow + chr3L 4385698 intron slow + chr3L 4385788 intron slow + chr3L_6_4385001 chr3L_4385001 RAL-774_125 1308 chr3L 4422298 4422367 chr3L 4422424 4422493 7 125 2.0 3.0 2.5 2.0 195 chr3L 4422298 5` UTR CG15020 + chr3L 4422396 intron CG15020 + chr3L 4422493 intron CG15020 + chr3L_7_4420001 chr3L_4420001 RAL-774_125 1309 chr3L 4441800 4441820 chr3L 4441928 4441928 4 121 10.0 8.5 9.2 0.4 128 chr3L 4441800 intergenic not near genes chr3L 4441864 intergenic not near genes chr3L 4441928 intergenic not near genes chr3L_4_4440001 chr3L_4440001 RAL-774_125 1310 chr3L 4441825 4441851 chr3L 4441953 4441969 7 125 6.0 11.0 8.5 0.7 144 chr3L 4441825 intergenic not near genes chr3L 4441897 intergenic not near genes chr3L 4441969 intergenic not near genes chr3L_7_4440001 chr3L_4440001 RAL-774_125 1311 chr3L 4477590 4477621 chr3L 4478116 4478177 10 536 24.5 30.5 27.5 0.4 587 chr3L 4477590 intergenic not near genes chr3L 4477884 intergenic not near genes chr3L 4478177 intergenic not near genes chr3L_10_4475001 chr3L_4475001 RAL-774_125 1312 chr3L 4519387 4519443 chr3L 4519514 4519542 8 120 5.0 0.0 2.5 2.3 155 chr3L 4519387 intron Tie - chr3L 4519464 intron Tie - chr3L 4519542 intron Tie - chr3L_8_4515001 chr3L_4515001 RAL-774_125 1313 chr3L 4597182 4597226 chr3L 4597306 4597358 6 124 4.5 8.5 6.5 0.8 176 chr3L 4597182 intron Src64B - chr3L 4597270 intron Src64B - chr3L 4597358 intron Src64B - chr3L_6_4595001 chr3L_4595001 RAL-774_125 1314 chr3L 4607728 4607799 chr3L 4607857 4607928 17 124 4.0 3.5 3.8 3.5 200 chr3L 4607728 intron Src64B - chr3L 4607828 intron Src64B - chr3L 4607928 intron Src64B - chr3L_17_4605001 chr3L_4605001 RAL-774_125 1315 chr3L 4652531 4652594 chr3L 4652653 4652728 10 131 2.5 2.5 2.5 2.9 197 chr3L 4652531 intron axo - chr3L 4652630 intron axo - chr3L 4652728 intron axo - chr3L_10_4650001 chr3L_4650001 RAL-774_125 1316 chr3L 4837853 4837912 chr3L 4837982 4838039 13 128 5.5 6.5 6.0 1.9 186 chr3L 4837853 3` UTR CG13707 - chr3L 4837946 3` UTR CG13707 - chr3L 4838039 3` UTR CG13707 - chr3L_13_4835001 chr3L_4835001 RAL-774_125 1317 chr3L 4839080 4839130 chr3L 4839214 4839269 11 145 1.0 1.0 1.0 5.5 189 chr3L 4839080 intron CG13707 - chr3L 4839174 intron CG13707 - chr3L 4839269 intron CG13707 - chr3L_11_4835001 chr3L_4835001 RAL-774_125 1318 chr3L 4844896 4844966 chr3L 4845120 4845188 7 227 0.0 6.0 3.0 1.8 292 chr3L 4844896 intergenic not near genes chr3L 4845042 intergenic not near genes chr3L 4845188 intergenic not near genes chr3L_7_4845001 chr3L_4845001 RAL-774_125 1319 chr3L 4858264 4858290 chr3L 4858404 4858425 8 136 9.0 4.5 6.8 1.0 161 chr3L 4858264 intergenic not near genes chr3L 4858344 intergenic not near genes chr3L 4858425 intergenic not near genes chr3L_8_4855001 chr3L_4855001 RAL-774_125 1320 chr3L 4858293 4858330 chr3L 4858393 4858458 11 125 5.0 2.5 3.8 2.3 165 chr3L 4858293 intergenic not near genes chr3L 4858376 intergenic not near genes chr3L 4858458 intergenic not near genes chr3L_11_4855001 chr3L_4855001 RAL-774_125 1321 chr3L 4864411 4864453 chr3L 4864697 4864728 11 282 7.5 3.0 5.2 1.8 317 chr3L 4864411 intron CG17150 + chr3L 4864570 intron CG17150 + chr3L 4864728 intron CG17150 + chr3L_11_4860001 chr3L_4860001 RAL-774_125 1322 chr3L 4901092 4901135 chr3L 4907332 4907375 diver 5 6238 2.0 4.5 3.2 1.2 6283 chr3L 4901092 intergenic CG13704 + chr3L 4904234 intergenic not near genes chr3L 4907375 intergenic not near genes chr3L_5_4900001 chr3L_4900001 RAL-774_125 1323 chr3L 5014238 5014296 chr3L 5014372 5014424 7 129 2.5 4.5 3.5 1.6 186 chr3L 5014238 intron Con - chr3L 5014331 intron Con - chr3L 5014424 intron Con - chr3L_7_5010001 chr3L_5010001 RAL-774_125 1324 chr3L 5015616 5015652 chr3L 5015739 5015777 4 127 5.5 2.5 4.0 0.8 161 chr3L 5015616 intron Con - chr3L 5015696 intron Con - chr3L 5015777 intron Con - chr3L_4_5015001 chr3L_5015001 RAL-774_125 1325 chr3L 5101189 5101228 chr3L 5101318 5101358 7 128 3.0 6.0 4.5 1.3 169 chr3L 5101189 intergenic not near genes chr3L 5101274 intergenic not near genes chr3L 5101358 intergenic not near genes chr3L_7_5100001 chr3L_5100001 RAL-774_125 1326 chr3L 5104442 5104503 chr3L 5124626 5124687 6 20183 4.0 3.0 3.5 1.3 20245 chr3L 5104442 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124687 intergenic not near genes chr3L_6_5110001 chr3L_5110001 RAL-774_125 1327 chr3L 5159266 5159341 chr3L 5159407 5159482 12 135 6.0 4.5 5.2 1.9 216 chr3L 5159266 3` UTR shep - chr3L 5159374 3` UTR shep - chr3L 5159482 3` UTR shep - chr3L_12_5155001 chr3L_5155001 RAL-774_125 1328 chr3L 5160170 5160207 chr3L 5160515 5160554 14 346 3.5 6.5 5.0 2.3 384 chr3L 5160170 3` UTR shep - chr3L 5160362 3` UTR shep - chr3L 5160554 3` UTR shep - chr3L_14_5160001 chr3L_5160001 RAL-774_125 1329 chr3L 5164607 5164666 chr3L 5164713 5164792 11 122 8.0 8.5 8.2 1.2 185 chr3L 5164607 intron shep - chr3L 5164700 intron shep - chr3L 5164792 intron shep - chr3L_11_5160001 chr3L_5160001 RAL-774_125 1330 chr3L 5166436 5166481 chr3L 5166576 5166614 10 138 2.0 6.0 4.0 2.0 178 chr3L 5166436 intron shep - chr3L 5166525 intron shep - chr3L 5166614 intron shep - chr3L_10_5165001 chr3L_5165001 RAL-774_125 1331 chr3L 5212190 5212261 chr3L 5212323 5212387 13 127 2.5 3.5 3.0 3.2 197 chr3L 5212190 intron shep - chr3L 5212288 intron shep - chr3L 5212387 intron shep - chr3L_13_5210001 chr3L_5210001 RAL-774_125 1332 chr3L 5226489 5226520 chr3L 5226621 5226672 6 149 5.5 1.5 3.5 1.3 183 chr3L 5226489 intron shep - chr3L 5226580 intron shep - chr3L 5226672 intron shep - chr3L_6_5225001 chr3L_5225001 RAL-774_125 1333 chr3L 5251810 5251863 chr3L 5251939 5251992 4 128 3.0 3.0 3.0 1.0 182 chr3L 5251810 intron shep - chr3L 5251901 intron shep - chr3L 5251992 intron shep - chr3L_4_5250001 chr3L_5250001 RAL-774_125 1334 chr3L 5257612 5257656 chr3L 5257934 5257994 13 334 7.0 6.0 6.5 1.7 382 chr3L 5257612 intron shep - chr3L 5257803 intron shep - chr3L 5257994 intron shep - chr3L_13_5255001 chr3L_5255001 RAL-774_125 1335 chr3L 5261165 5261176 chr3L 5261289 5261292 4 124 5.5 4.0 4.8 0.7 127 chr3L 5261165 intron shep - chr3L 5261228 intron shep - chr3L 5261292 intron shep - chr3L_4_5260001 chr3L_5260001 RAL-774_125 1336 chr3L 5339779 5339841 chr3L 5340068 5340135 14 292 4.5 1.5 3.0 3.5 356 chr3L 5339779 intergenic not near genes chr3L 5339957 intergenic not near genes chr3L 5340135 intergenic not near genes chr3L_14_5335001 chr3L_5335001 RAL-774_125 1337 chr3L 5351064 5351129 chr3L 5351199 5351264 8 134 2.5 3.0 2.8 2.1 200 chr3L 5351064 intron lama - chr3L 5351164 intron lama - chr3L 5351264 intron lama - chr3L_8_5350001 chr3L_5350001 RAL-774_125 1338 chr3L 5388155 5388225 chr3L 5388529 5388597 18 369 5.0 3.0 4.0 3.6 442 chr3L 5388155 intergenic not near genes chr3L 5388376 intergenic not near genes chr3L 5388597 intergenic not near genes chr3L_18_5385001 chr3L_5385001 RAL-774_125 1339 chr3L 5401472 5401513 chr3L 5401712 5401753 6 240 2.5 2.5 2.5 1.7 281 chr3L 5401472 intergenic not near genes chr3L 5401612 intergenic not near genes chr3L 5401753 intergenic not near genes chr3L_6_5400001 chr3L_5400001 RAL-774_125 1340 chr3L 5428627 5428657 chr3L 5428758 5428788 7 130 3.0 0.0 1.5 2.8 161 chr3L 5428627 intron CG34391 + chr3L 5428708 intron CG34391 + chr3L 5428788 intron CG34391 + chr3L_7_5425001 chr3L_5425001 RAL-774_125 1341 chr3L 5504519 5504557 chr3L 5504647 5504677 7 124 5.5 2.0 3.8 1.5 158 chr3L 5504519 intron CG34342 - chr3L 5504598 intron CG34342 - chr3L 5504677 intron CG34342 - chr3L_7_5500001 chr3L_5500001 RAL-774_125 1342 chr3L 5516371 5516440 chr3L 5516506 5516585 13 136 3.5 3.0 3.2 3.1 214 chr3L 5516371 intron Lkr - chr3L 5516478 intron Lkr - chr3L 5516585 intron Lkr - chr3L_13_5515001 chr3L_5515001 RAL-774_125 1343 chr3L 5531570 5531634 chr3L 5532258 5532322 15 686 5.0 3.0 4.0 3.0 752 chr3L 5531570 intergenic not near genes chr3L 5531946 intergenic not near genes chr3L 5532322 intergenic not near genes chr3L_15_5530001 chr3L_5530001 RAL-774_125 1344 chr3L 5537683 5537721 chr3L 5538075 5538106 jockey 7 390 3.5 3.0 3.2 1.7 423 chr3L 5537683 intergenic not near genes chr3L 5537894 intergenic not near genes chr3L 5538106 intergenic CG10625 - chr3L_7_5535001 chr3L_5535001 RAL-774_125 1345 chr3L 5537731 5537746 chr3L 5538072 5538138 jockey 5 381 1.5 2.5 2.0 1.7 407 chr3L 5537731 intergenic not near genes chr3L 5537934 intergenic CG10625 - chr3L 5538138 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 RAL-774_125 1346 chr3L 5581437 5581470 chr3L 5581568 5581606 6 132 8.5 5.5 7.0 0.8 169 chr3L 5581437 intergenic not near genes chr3L 5581522 intergenic not near genes chr3L 5581606 intergenic not near genes chr3L_6_5580001 chr3L_5580001 RAL-774_125 1347 chr3L 5613443 5613483 chr3L 5613620 5613655 4 173 2.5 3.5 3.0 1.0 212 chr3L 5613443 intergenic not near genes chr3L 5613549 intergenic not near genes chr3L 5613655 intergenic not near genes chr3L_4_5610001 chr3L_5610001 RAL-774_125 1348 chr3L 5677149 5677205 chr3L 5677275 5677326 5 125 1.5 9.0 5.2 0.8 177 chr3L 5677149 intron sif + chr3L 5677238 intron sif + chr3L 5677326 intron sif + chr3L_5_5675001 chr3L_5675001 RAL-774_125 1349 chr3L 5909991 5910048 chr3L 5910282 5910339 pogo 12 290 4.5 3.5 4.0 2.4 348 chr3L 5909991 intron CG13288 + chr3L 5910165 intron CG13288 + chr3L 5910339 intron CG13288 + chr3L_12_5910001 chr3L_5910001 RAL-774_125 1350 chr3L 5926281 5926303 chr3L 5926511 5926528 7 233 12.0 5.5 8.8 0.7 247 chr3L 5926281 intron Vap-33B + chr3L 5926404 intron Vap-33B + chr3L 5926528 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 RAL-774_125 1351 chr3L 5926304 5926339 chr3L 5926510 5926569 BS 6 227 6.5 5.5 6.0 0.9 265 chr3L 5926304 intron Vap-33B + chr3L 5926436 intron Vap-33B + chr3L 5926569 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-774_125 1352 chr3L 5986995 5987028 chr3L 5987126 5987159 7 129 4.5 4.0 4.2 1.3 164 chr3L 5986995 intergenic not near genes chr3L 5987077 intergenic not near genes chr3L 5987159 intergenic not near genes chr3L_7_5985001 chr3L_5985001 RAL-774_125 1353 chr3L 6001638 6001703 chr3L 6004388 6004453 jockey 8 2749 4.5 0.0 2.2 2.5 2815 chr3L 6001638 intron PVRAP + chr3L 6003046 intron PVRAP + chr3L 6004453 intron PVRAP + chr3L_8_6000001 chr3L_6000001 RAL-774_125 1354 chr3L 6022197 6022247 chr3L 6022331 6022366 10 125 4.0 1.0 2.5 2.9 169 chr3L 6022197 intron PVRAP + chr3L 6022282 intron PVRAP + chr3L 6022366 intron PVRAP + chr3L_10_6020001 chr3L_6020001 RAL-774_125 1355 chr3L 6040249 6040261 chr3L 6040374 6040390 4 127 6.0 0.0 3.0 1.0 141 chr3L 6040249 intergenic Jon65Aiv + chr3L 6040320 intergenic Jon65Aiv + chr3L 6040390 intergenic Jon65Aiv + chr3L_4_6040001 chr3L_6040001 RAL-774_125 1356 chr3L 6040290 6040352 chr3L 6042723 6042740 Doc 6 2426 0.0 4.0 2.0 2.0 2450 chr3L 6040290 intergenic Jon65Aiv + chr3L 6041515 intergenic not near genes chr3L 6042740 intergenic not near genes chr3L_6_6040001 chr3L_6040001 RAL-774_125 1357 chr3L 6052620 6052653 chr3L 6052753 6052777 7 122 9.0 7.0 8.0 0.8 157 chr3L 6052620 exon Jon65Aii + chr3L 6052698 intron Jon65Aii + chr3L 6052777 exon Jon65Aii + chr3L_7_6050001 chr3L_6050001 RAL-774_125 1358 chr3L 6064973 6065031 chr3L 6065095 6065158 6 125 4.0 0.5 2.2 1.9 185 chr3L 6064973 intergenic not near genes chr3L 6065066 intergenic not near genes chr3L 6065158 intergenic not near genes chr3L_6_6065001 chr3L_6065001 RAL-774_125 1359 chr3L 6119130 6119172 chr3L 6119257 6119299 12 126 2.0 1.5 1.8 4.3 169 chr3L 6119130 exon Ets65A + chr3L 6119214 intron Ets65A + chr3L 6119299 intron Ets65A + chr3L_12_6115001 chr3L_6115001 RAL-774_125 1360 chr3L 6124355 6124370 chr3L 6124502 6124508 4 142 0.5 10.5 5.5 0.6 153 chr3L 6124355 exon l(3)mbn - chr3L 6124432 exon l(3)mbn - chr3L 6124508 exon l(3)mbn - chr3L_4_6120001 chr3L_6120001 RAL-774_125 1361 chr3L 6155687 6155700 chr3L 6155806 6155836 6 133 4.5 0.0 2.2 1.9 149 chr3L 6155687 intergenic CR45421 - chr3L 6155762 intergenic not near genes chr3L 6155836 intergenic not near genes chr3L_6_6155001 chr3L_6155001 RAL-774_125 1362 chr3L 6159858 6159888 chr3L 6159988 6160028 10 135 1.5 3.0 2.2 3.1 170 chr3L 6159858 intergenic not near genes chr3L 6159943 intergenic not near genes chr3L 6160028 intergenic not near genes chr3L_10_6155001 chr3L_6155001 RAL-774_125 1363 chr3L 6169085 6169119 chr3L 6169211 6169250 7 129 10.0 4.5 7.2 0.9 165 chr3L 6169085 3` UTR CG10289 - chr3L 6169168 3` UTR CG10289 - chr3L 6169250 3` UTR CG10289 - chr3L_7_6165001 chr3L_6165001 RAL-774_125 1364 chr3L 6220886 6220941 chr3L 6230069 6230143 roo 15 9196 6.5 3.0 4.8 2.6 9257 chr3L 6220886 5` UTR pncr008:3L + chr3L 6225514 intergenic not near genes chr3L 6230143 intergenic not near genes chr3L_15_6225001 chr3L_6225001 RAL-774_125 1365 chr3L 6267272 6267341 chr3L 6267405 6267479 17 134 4.0 4.5 4.2 3.3 207 chr3L 6267272 intergenic not near genes chr3L 6267376 intergenic not near genes chr3L 6267479 intergenic not near genes chr3L_17_6265001 chr3L_6265001 RAL-774_125 1366 chr3L 6334981 6335031 chr3L 6335501 6335552 297 8 519 5.5 6.0 5.8 1.2 571 chr3L 6334981 intron CG13300 - chr3L 6335266 intron CG13300 - chr3L 6335552 intron CG13300 - chr3L_8_6335001 chr3L_6335001 RAL-774_125 1367 chr3L 6512223 6512277 chr3L 6512358 6512398 9 127 3.0 3.0 3.0 2.2 175 chr3L 6512223 intron sfl + chr3L 6512310 intron sfl + chr3L 6512398 intron sfl + chr3L_9_6510001 chr3L_6510001 RAL-774_125 1368 chr3L 6620587 6620597 chr3L 6621061 6621073 Rt1c 6 475 4.0 8.0 6.0 0.9 486 chr3L 6620587 intergenic not near genes chr3L 6620830 intergenic not near genes chr3L 6621073 intergenic not near genes chr3L_6_6620001 chr3L_6620001 RAL-774_125 1369 chr3L 6621695 6621750 chr3L 6621927 6621983 11 232 1.5 5.5 3.5 2.4 288 chr3L 6621695 intergenic not near genes chr3L 6621839 intergenic not near genes chr3L 6621983 intergenic not near genes chr3L_11_6620001 chr3L_6620001 RAL-774_125 1370 chr3L 6623444 6623503 chr3L 6623575 6623639 10 132 6.0 4.0 5.0 1.7 195 chr3L 6623444 intergenic not near genes chr3L 6623542 intergenic GluRIA + chr3L 6623639 intergenic GluRIA + chr3L_10_6620001 chr3L_6620001 RAL-774_125 1371 chr3L 6652046 6652109 chr3L 6652157 6652228 16 119 4.5 4.5 4.5 2.9 182 chr3L 6652046 intergenic not near genes chr3L 6652137 intergenic not near genes chr3L 6652228 intergenic not near genes chr3L_16_6650001 chr3L_6650001 RAL-774_125 1372 chr3L 6668923 6668981 chr3L 6669054 6669091 7 126 3.0 0.0 1.5 2.8 168 chr3L 6668923 intergenic not near genes chr3L 6669007 intergenic not near genes chr3L 6669091 intergenic not near genes chr3L_7_6665001 chr3L_6665001 RAL-774_125 1373 chr3L 6781076 6781149 chr3L 6783139 6783209 Doc 11 2060 4.5 0.0 2.2 3.4 2133 chr3L 6781076 intergenic not near genes chr3L 6782142 intergenic not near genes chr3L 6783209 intergenic not near genes chr3L_11_6780001 chr3L_6780001 RAL-774_125 1374 chr3L 6835889 6835924 chr3L 6836015 6836052 9 126 2.0 3.5 2.8 2.4 163 chr3L 6835889 intergenic not near genes chr3L 6835970 intergenic not near genes chr3L 6836052 intergenic not near genes chr3L_9_6835001 chr3L_6835001 RAL-774_125 1375 chr3L 6887496 6887538 chr3L 6895027 6895075 roo 9 7537 4.0 5.5 4.8 1.6 7579 chr3L 6887496 intergenic not near genes chr3L 6891286 intergenic not near genes chr3L 6895075 intergenic not near genes chr3L_9_6890001 chr3L_6890001 RAL-774_125 1376 chr3L 6907971 6908040 chr3L 6908106 6908168 5 128 1.5 2.0 1.8 1.8 197 chr3L 6907971 intergenic not near genes chr3L 6908070 intergenic not near genes chr3L 6908168 intergenic not near genes chr3L_5_6905001 chr3L_6905001 RAL-774_125 1377 chr3L 6934288 6934350 chr3L 6934527 6934592 14 249 3.0 2.0 2.5 4.0 304 chr3L 6934288 exon CG14820 + chr3L 6934440 intron CG14820 + chr3L 6934592 exon CG14820 + chr3L_14_6930001 chr3L_6930001 RAL-774_125 1378 chr3L 6974506 6974517 chr3L 6974592 6974665 4 134 2.0 4.5 3.2 1.0 159 chr3L 6974506 intron Galphai - chr3L 6974586 intron Galphai - chr3L 6974665 intron Galphai - chr3L_4_6970001 chr3L_6970001 RAL-774_125 1379 chr3L 7001946 7001965 chr3L 7002117 7002130 9 169 6.5 3.5 5.0 1.5 184 chr3L 7001946 intron Mp + chr3L 7002038 intron Mp + chr3L 7002130 intron Mp + chr3L_9_7000001 chr3L_7000001 RAL-774_125 1380 chr3L 7006223 7006230 chr3L 7006345 7006354 4 122 12.5 3.0 7.8 0.5 131 chr3L 7006223 intron Mp + chr3L 7006288 intron Mp + chr3L 7006354 intron Mp + chr3L_4_7005001 chr3L_7005001 RAL-774_125 1381 chr3L 7006233 7006263 chr3L 7006332 7006365 4 106 7.0 3.0 5.0 0.7 132 chr3L 7006233 intron Mp + chr3L 7006299 intron Mp + chr3L 7006365 intron Mp + chr3L_4_7005001 chr3L_7005001 RAL-774_125 1382 chr3L 7033138 7033200 chr3L 7033259 7033317 6 119 4.5 4.5 4.5 1.1 179 chr3L 7033138 intron Mp + chr3L 7033228 intron Mp + chr3L 7033317 intron Mp + chr3L_6_7030001 chr3L_7030001 RAL-774_125 1383 chr3L 7055368 7055429 chr3L 7055759 7055831 7 398 3.0 3.0 3.0 1.8 463 chr3L 7055368 intergenic not near genes chr3L 7055600 intergenic not near genes chr3L 7055831 intergenic not near genes chr3L_7_7055001 chr3L_7055001 RAL-774_125 1384 chr3L 7061365 7061405 chr3L 7061501 7061534 10 134 4.5 5.0 4.8 1.7 169 chr3L 7061365 intron CG8641 - chr3L 7061450 intron CG8641 - chr3L 7061534 intron CG8641 - chr3L_10_7060001 chr3L_7060001 RAL-774_125 1385 chr3L 7090876 7090943 chr3L 7091009 7091074 11 133 2.0 6.0 4.0 2.2 198 chr3L 7090876 intergenic not near genes chr3L 7090975 intergenic not near genes chr3L 7091074 intergenic not near genes chr3L_11_7090001 chr3L_7090001 RAL-774_125 1386 chr3L 7129917 7129948 chr3L 7130159 7130185 BS 5 240 0.0 1.5 0.8 2.8 268 chr3L 7129917 intergenic CG15829 + chr3L 7130051 intergenic CG15829 + chr3L 7130185 intergenic not near genes chr3L_5_7130001 chr3L_7130001 RAL-774_125 1387 chr3L 7244913 7244958 chr3L 7245022 7245070 9 121 3.5 2.5 3.0 2.2 157 chr3L 7244913 exon mei-P22 + chr3L 7244992 exon mei-P22 + chr3L 7245070 exon mei-P22 + chr3L_9_7240001 chr3L_7240001 RAL-774_125 1388 chr3L 7285424 7285439 chr3L 7285551 7285561 5 123 2.0 2.5 2.2 1.6 137 chr3L 7285424 intron unc-13-4A - chr3L 7285492 intron unc-13-4A - chr3L 7285561 intron unc-13-4A - chr3L_5_7285001 chr3L_7285001 RAL-774_125 1389 chr3L 7285440 7285462 chr3L 7285545 7285589 5 118 2.0 2.5 2.2 1.6 149 chr3L 7285440 intron unc-13-4A - chr3L 7285514 intron unc-13-4A - chr3L 7285589 intron unc-13-4A - chr3L_5_7285001 chr3L_7285001 RAL-774_125 1390 chr3L 7358276 7358324 chr3L 7359590 7359646 12 1319 18.0 19.5 18.8 0.6 1370 chr3L 7358276 exon pst - chr3L 7358961 exon pst - chr3L 7359646 intron pst - chr3L_12_7355001 chr3L_7355001 RAL-774_125 1391 chr3L 7357187 7357210 chr3L 7360263 7360280 7 3073 31.0 16.5 23.8 0.3 3093 chr3L 7357187 intergenic pst -,CTCF - chr3L 7358734 exon pst - chr3L 7360280 intergenic pst -,Sec63 + chr3L_7_7355001 chr3L_7355001 RAL-774_125 1392 chr3L 7377273 7377340 chr3L 7380428 7380495 297 15 3153 3.0 5.0 4.0 3.0 3222 chr3L 7377273 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380495 intron SMSr - chr3L_15_7375001 chr3L_7375001 RAL-774_125 1393 chr3L 7403569 7403591 chr3L 7403697 7403709 4 123 6.0 1.5 3.8 0.8 140 chr3L 7403569 exon CG8560 - chr3L 7403639 intron CG8560 - chr3L 7403709 intron CG8560 - chr3L_4_7400001 chr3L_7400001 RAL-774_125 1394 chr3L 7443979 7444005 chr3L 7444127 7444153 7 144 10.0 0.0 5.0 1.2 174 chr3L 7443979 intron CG42458 + chr3L 7444066 intron CG42458 + chr3L 7444153 intron CG42458 + chr3L_7_7440001 chr3L_7440001 RAL-774_125 1395 chr3L 7498727 7498733 chr3L 7503554 7503560 F-element 5 4827 9.5 2.5 6.0 0.7 4833 chr3L 7498727 5` UTR CG8539 - chr3L 7501144 intergenic not near genes chr3L 7503560 intergenic not near genes chr3L_5_7500001 chr3L_7500001 RAL-774_125 1396 chr3L 7498745 7498766 chr3L 7503541 7503593 F-element 4 4819 6.0 1.5 3.8 0.8 4848 chr3L 7498745 5` UTR CG8539 - chr3L 7501169 intergenic not near genes chr3L 7503593 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-774_125 1397 chr3L 7505389 7505432 chr3L 7505515 7505558 6 125 3.0 5.5 4.2 1.2 169 chr3L 7505389 intergenic CG7548 - chr3L 7505474 intergenic CG7548 - chr3L 7505558 3` UTR CG7548 - chr3L_6_7505001 chr3L_7505001 RAL-774_125 1398 chr3L 7576166 7576241 chr3L 7576304 7576368 11 136 6.5 4.0 5.2 1.8 202 chr3L 7576166 intergenic not near genes chr3L 7576267 intergenic not near genes chr3L 7576368 intergenic not near genes chr3L_11_7575001 chr3L_7575001 RAL-774_125 1399 chr3L 7591117 7591159 chr3L 7591246 7591300 7 125 6.0 5.0 5.5 1.1 183 chr3L 7591117 intergenic CG7716 - chr3L 7591208 intergenic CG7716 - chr3L 7591300 intergenic CG7716 - chr3L_7_7590001 chr3L_7590001 RAL-774_125 1400 chr3L 7711954 7711978 chr3L 7712087 7712115 5 134 8.5 0.0 4.2 1.0 161 chr3L 7711954 intron,intron CG32373 +,Ank2 - chr3L 7712034 intron,intron CG32373 +,Ank2 - chr3L 7712115 intron,intron CG32373 +,Ank2 - chr3L_5_7710001 chr3L_7710001 RAL-774_125 1401 chr3L 7752133 7752164 chr3L 7752263 7752321 11 149 4.0 4.5 4.2 2.1 188 chr3L 7752133 intron CG32373 + chr3L 7752227 intron CG32373 + chr3L 7752321 intron CG32373 + chr3L_11_7750001 chr3L_7750001 RAL-774_125 1402 chr3L 7767514 7767534 chr3L 7767695 7767709 4 178 15.0 9.0 12.0 0.3 195 chr3L 7767514 intron,exon Clk -,CG32371 - chr3L 7767612 intron,exon Clk -,CG32371 - chr3L 7767709 intron,exon Clk -,CG32371 - chr3L_4_7765001 chr3L_7765001 RAL-774_125 1403 chr3L 7767536 7767549 chr3L 7767691 7767724 4 171 13.5 9.0 11.2 0.3 188 chr3L 7767536 intron,exon Clk -,CG32371 - chr3L 7767630 intron,exon Clk -,CG32371 - chr3L 7767724 intron,exon Clk -,CG32371 - chr3L_4_7765001 chr3L_7765001 RAL-774_125 1404 chr3L 7793674 7793734 chr3L 7800776 7800836 297 12 7101 7.0 5.5 6.2 1.7 7162 chr3L 7793674 intron CG32369 - chr3L 7797255 intron CG32369 - chr3L 7800836 intron CG32369 - chr3L_12_7795001 chr3L_7795001 RAL-774_125 1405 chr3L 7843131 7843154 chr3L 7843273 7843296 7 142 1.5 7.5 4.5 1.3 165 chr3L 7843131 intron Pdp1 - chr3L 7843214 intron Pdp1 - chr3L 7843296 intron Pdp1 - chr3L_7_7840001 chr3L_7840001 RAL-774_125 1406 chr3L 7876076 7876096 chr3L 7876181 7876225 4 123 3.5 1.0 2.2 1.2 149 chr3L 7876076 intron CG32365 + chr3L 7876150 intron CG32365 + chr3L 7876225 intron CG32365 + chr3L_4_7875001 chr3L_7875001 RAL-774_125 1407 chr3L 7886479 7886530 chr3L 7889039 7889097 Stalker4 5 2563 2.5 3.5 3.0 1.2 2618 chr3L 7886479 intron CG32365 + chr3L 7887788 intron CG32365 + chr3L 7889097 intron CG32365 + chr3L_5_7885001 chr3L_7885001 RAL-774_125 1408 chr3L 7902382 7902453 chr3L 7902507 7902597 12 129 4.5 1.0 2.8 3.2 215 chr3L 7902382 intron pbl - chr3L 7902490 intron pbl - chr3L 7902597 intron pbl - chr3L_12_7900001 chr3L_7900001 RAL-774_125 1409 chr3L 7916803 7916846 chr3L 7926024 7926062 roo 10 9219 5.5 6.0 5.8 1.5 9259 chr3L 7916803 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926062 3` UTR syd - chr3L_10_7920001 chr3L_7920001 RAL-774_125 1410 chr3L 7985351 7985384 chr3L 7987713 7987762 NOF 5 2375 4.0 6.5 5.2 0.8 2411 chr3L 7985351 intron nmo + chr3L 7986556 intron nmo + chr3L 7987762 intron nmo + chr3L_5_7985001 chr3L_7985001 RAL-774_125 1411 chr3L 8003578 8003588 chr3L 8003718 8003728 5 140 3.5 5.0 4.2 1.0 150 chr3L 8003578 intron nmo + chr3L 8003653 intron nmo + chr3L 8003728 intron nmo + chr3L_5_8000001 chr3L_8000001 RAL-774_125 1412 chr3L 8019664 8019716 chr3L 8024120 8024148 NOF 8 4450 3.5 4.5 4.0 1.6 4484 chr3L 8019664 intron nmo + chr3L 8021906 intron nmo + chr3L 8024148 intron nmo + chr3L_8_8020001 chr3L_8020001 RAL-774_125 1413 chr3L 8046251 8046327 chr3L 8046382 8046459 13 128 1.5 3.5 2.5 3.7 208 chr3L 8046251 intron nmo + chr3L 8046355 intron nmo + chr3L 8046459 intron nmo + chr3L_13_8045001 chr3L_8045001 RAL-774_125 1414 chr3L 8081228 8081249 chr3L 8081381 8081399 4 152 4.5 3.0 3.8 0.8 171 chr3L 8081228 intron Ect4 + chr3L 8081314 intron Ect4 + chr3L 8081399 intron Ect4 + chr3L_4_8080001 chr3L_8080001 RAL-774_125 1415 chr3L 8081913 8081945 chr3L 8083194 8083226 5 1281 29.0 13.0 21.0 0.2 1313 chr3L 8081913 intron Ect4 + chr3L 8082570 intron,3` UTR Ect4 +,CR43974 - chr3L 8083226 intron Ect4 + chr3L_5_8080001 chr3L_8080001 RAL-774_125 1416 chr3L 8149711 8149756 chr3L 8149867 8149907 4 155 3.5 5.0 4.2 0.8 196 chr3L 8149711 intron CG13676 - chr3L 8149809 intron CG13676 - chr3L 8149907 intron CG13676 - chr3L_4_8145001 chr3L_8145001 RAL-774_125 1417 chr3L 8164837 8164886 chr3L 8165078 8165127 13 240 7.0 4.0 5.5 2.0 290 chr3L 8164837 intron CG13675 - chr3L 8164982 intron CG13675 - chr3L 8165127 intron CG13675 - chr3L_13_8160001 chr3L_8160001 RAL-774_125 1418 chr3L 8210755 8210806 chr3L 8210920 8210971 7 165 2.0 3.0 2.5 2.0 216 chr3L 8210755 intergenic CG32364 - chr3L 8210863 intergenic CG32364 - chr3L 8210971 intergenic CG32364 - chr3L_7_8210001 chr3L_8210001 RAL-774_125 1419 chr3L 8233542 8233576 chr3L 8238854 8238888 Rt1a 9 5307 4.5 4.5 4.5 1.6 5346 chr3L 8233542 intron CG7213 - chr3L 8236215 intron CG7213 - chr3L 8238888 intron,intron CG7213 -,Dscam4 + chr3L_9_8235001 chr3L_8235001 RAL-774_125 1420 chr3L 8295749 8295812 chr3L 8295957 8296020 14 206 6.5 3.0 4.8 2.4 271 chr3L 8295749 intergenic CG7201 - chr3L 8295884 intergenic not near genes chr3L 8296020 intergenic not near genes chr3L_14_8295001 chr3L_8295001 RAL-774_125 1421 chr3L 8364488 8364503 chr3L 8364613 8364639 4 136 4.5 1.5 3.0 1.0 151 chr3L 8364488 intergenic not near genes chr3L 8364564 intergenic not near genes chr3L 8364639 intergenic not near genes chr3L_4_8360001 chr3L_8360001 RAL-774_125 1422 chr3L 8373412 8373412 chr3L 8373523 8373549 4 122 12.0 3.5 7.8 0.5 137 chr3L 8373412 intron ImpE1 + chr3L 8373480 intron ImpE1 + chr3L 8373549 intron ImpE1 + chr3L_4_8370001 chr3L_8370001 RAL-774_125 1423 chr3L 8443543 8443581 chr3L 8443675 8443713 5 129 4.0 6.0 5.0 0.8 170 chr3L 8443543 3` UTR CG6983 - chr3L 8443628 3` UTR CG6983 - chr3L 8443713 3` UTR CG6983 - chr3L_5_8440001 chr3L_8440001 RAL-774_125 1424 chr3L 8481750 8481794 chr3L 8490937 8490973 roo 8 9189 7.5 3.0 5.2 1.3 9223 chr3L 8481750 intron CG43163 - chr3L 8486362 intron CG43163 - chr3L 8490973 intron CG43163 - chr3L_8_8485001 chr3L_8485001 RAL-774_125 1425 chr3L 8498269 8498311 chr3L 8505786 8505828 blood 9 7515 3.5 2.0 2.8 2.4 7559 chr3L 8498269 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505828 intron CG43163 - chr3L_9_8500001 chr3L_8500001 RAL-774_125 1426 chr3L 8523557 8523624 chr3L 8523821 8523888 8 259 4.0 6.0 5.0 1.3 331 chr3L 8523557 intergenic GstO2 -,GstO1 - chr3L 8523722 intergenic GstO1 -,GstO2 - chr3L 8523888 exon GstO1 - chr3L_8_8520001 chr3L_8520001 RAL-774_125 1427 chr3L 8558619 8558682 chr3L 8558755 8558798 11 136 6.5 4.0 5.2 1.8 179 chr3L 8558619 intron rhea + chr3L 8558708 intron rhea + chr3L 8558798 intron rhea + chr3L_11_8555001 chr3L_8555001 RAL-774_125 1428 chr3L 8663430 8663508 chr3L 8663624 8663701 6 194 1.5 1.5 1.5 2.4 271 chr3L 8663430 intergenic not near genes chr3L 8663566 intergenic not near genes chr3L 8663701 intergenic not near genes chr3L_6_8660001 chr3L_8660001 RAL-774_125 1429 chr3L 8721161 8721210 chr3L 8721309 8721361 9 147 8.0 3.0 5.5 1.4 200 chr3L 8721161 5` UTR CG32022 - chr3L 8721261 5` UTR CG32022 - chr3L 8721361 5` UTR CG6511 + chr3L_9_8720001 chr3L_8720001 RAL-774_125 1430 chr3L 8782095 8782152 chr3L 8782271 8782328 5 176 1.0 1.0 1.0 2.5 233 chr3L 8782095 intron Fhos + chr3L 8782212 intron Fhos + chr3L 8782328 intron Fhos + chr3L_5_8780001 chr3L_8780001 RAL-774_125 1431 chr3L 8784809 8784842 chr3L 8784942 8784975 7 133 3.0 3.0 3.0 1.8 166 chr3L 8784809 intron Fhos + chr3L 8784892 intron Fhos + chr3L 8784975 intron Fhos + chr3L_7_8780001 chr3L_8780001 RAL-774_125 1432 chr3L 8839685 8839746 chr3L 8839808 8839876 12 127 8.0 5.5 6.8 1.5 191 chr3L 8839685 intron dally + chr3L 8839780 intron dally + chr3L 8839876 intron dally + chr3L_12_8835001 chr3L_8835001 RAL-774_125 1433 chr3L 8839349 8839402 chr3L 8848135 8848189 5 8790 36.5 39.5 38.0 0.1 8840 chr3L 8839349 intron dally + chr3L 8843769 intron dally + chr3L 8848189 intron dally + chr3L_5_8840001 chr3L_8840001 RAL-774_125 1434 chr3L 8862743 8862802 chr3L 8862864 8862929 10 123 4.5 3.5 4.0 2.0 186 chr3L 8862743 intron dally + chr3L 8862836 intron dally + chr3L 8862929 intron dally + chr3L_10_8860001 chr3L_8860001 RAL-774_125 1435 chr3L 8875154 8875216 chr3L 8875289 8875352 11 140 3.0 1.5 2.2 3.4 198 chr3L 8875154 intron dally + chr3L 8875253 intron dally + chr3L 8875352 intron dally + chr3L_11_8875001 chr3L_8875001 RAL-774_125 1436 chr3L 8890133 8890190 chr3L 8890291 8890353 10 159 3.5 5.5 4.5 1.8 220 chr3L 8890133 3` UTR dally + chr3L 8890243 3` UTR dally + chr3L 8890353 3` UTR dally + chr3L_10_8890001 chr3L_8890001 RAL-774_125 1437 chr3L 9003900 9003972 chr3L 9004030 9004107 7 133 2.0 2.5 2.2 2.2 207 chr3L 9003900 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004107 intergenic not near genes chr3L_7_9000001 chr3L_9000001 RAL-774_125 1438 chr3L 9030402 9030454 chr3L 9030531 9030583 8 129 3.0 3.5 3.2 1.9 181 chr3L 9030402 intergenic not near genes chr3L 9030492 intergenic not near genes chr3L 9030583 intergenic not near genes chr3L_8_9030001 chr3L_9030001 RAL-774_125 1439 chr3L 9047091 9047110 chr3L 9047228 9047242 6 136 0.0 8.0 4.0 1.2 151 chr3L 9047091 intergenic CG5144 + chr3L 9047166 intergenic CG5144 + chr3L 9047242 intergenic CG5144 + chr3L_6_9045001 chr3L_9045001 RAL-774_125 1440 chr3L 9076896 9076960 chr3L 9084505 9084515 412 14 7602 2.5 4.5 3.5 3.1 7619 chr3L 9076896 exon Tequila + chr3L 9080706 intron Tequila + chr3L 9084515 exon Tequila + chr3L_14_9080001 chr3L_9080001 RAL-774_125 1441 chr3L 9086880 9086909 chr3L 9087005 9087042 7 128 8.0 8.0 8.0 0.8 162 chr3L 9086880 exon Tequila + chr3L 9086961 exon Tequila + chr3L 9087042 exon Tequila + chr3L_7_9085001 chr3L_9085001 RAL-774_125 1442 chr3L 9118334 9118347 chr3L 9118428 9118477 5 113 6.0 5.0 5.5 0.8 143 chr3L 9118334 intron bol - chr3L 9118406 intron bol - chr3L 9118477 intron bol - chr3L_5_9115001 chr3L_9115001 RAL-774_125 1443 chr3L 9130520 9130537 chr3L 9134326 9134348 412 4 3807 11.0 5.0 8.0 0.4 3828 chr3L 9130520 intergenic bol - chr3L 9132434 intergenic not near genes chr3L 9134348 intergenic Dhpr + chr3L_4_9130001 chr3L_9130001 RAL-774_125 1444 chr3L 9130538 9130578 chr3L 9134319 9134326 412 5 3790 6.5 5.0 5.8 0.7 3788 chr3L 9130538 intergenic bol - chr3L 9132432 intergenic not near genes chr3L 9134326 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 RAL-774_125 1445 chr3L 9164661 9164685 chr3L 9166173 9166186 hobo 5 1512 6.5 0.0 3.2 1.2 1525 chr3L 9164661 intron Rdl - chr3L 9165424 intron Rdl - chr3L 9166186 intron Rdl - chr3L_5_9165001 chr3L_9165001 RAL-774_125 1446 chr3L 9191855 9191904 chr3L 9191968 9192034 5 129 3.0 6.0 4.5 0.9 179 chr3L 9191855 intergenic not near genes chr3L 9191944 intergenic not near genes chr3L 9192034 intergenic not near genes chr3L_5_9190001 chr3L_9190001 RAL-774_125 1447 chr3L 9219208 9219261 chr3L 9219920 9219980 jockey 16 708 6.0 6.0 6.0 2.3 772 chr3L 9219208 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219980 intergenic not near genes chr3L_16_9215001 chr3L_9215001 RAL-774_125 1448 chr3L 9270577 9270640 chr3L 9278382 9278400 roo 8 7792 1.5 4.0 2.8 2.1 7823 chr3L 9270577 intron GluRIB + chr3L 9274488 intron GluRIB + chr3L 9278400 exon GluRIB + chr3L_8_9270001 chr3L_9270001 RAL-774_125 1449 chr3L 9307795 9307796 chr3L 22908066 22908066 4 13600270 20.0 18.0 19.0 0.2 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-774_125 1450 chr3L 9312693 9312731 chr3L 9312806 9312859 8 123 9.0 3.5 6.2 1.1 166 chr3L 9312693 intergenic not near genes chr3L 9312776 intergenic not near genes chr3L 9312859 intergenic not near genes chr3L_8_9310001 chr3L_9310001 RAL-774_125 1451 chr3L 9320370 9320413 chr3L 9320496 9320529 8 125 5.0 5.5 5.2 1.3 159 chr3L 9320370 intergenic not near genes chr3L 9320450 intergenic not near genes chr3L 9320529 intergenic not near genes chr3L_8_9320001 chr3L_9320001 RAL-774_125 1452 chr3L 9359545 9359601 chr3L 9359686 9359742 6 141 1.5 5.5 3.5 1.3 197 chr3L 9359545 3` UTR CG32039 + chr3L 9359644 3` UTR CG32039 + chr3L 9359742 3` UTR CG32039 + chr3L_6_9355001 chr3L_9355001 RAL-774_125 1453 chr3L 9391877 9391903 chr3L 9391961 9391997 5 107 5.0 8.0 6.5 0.7 120 chr3L 9391877 intron CG4080 - chr3L 9391937 intron CG4080 - chr3L 9391997 intron CG4080 - chr3L_5_9390001 chr3L_9390001 RAL-774_125 1454 chr3L 9429467 9429539 chr3L 9429601 9429659 9 130 4.0 4.0 4.0 1.8 192 chr3L 9429467 intron,3` UTR RpS17 -,snoRNA:Psi28S-612 - chr3L 9429563 intron RpS17 - chr3L 9429659 intron RpS17 - chr3L_9_9425001 chr3L_9425001 RAL-774_125 1455 chr3L 9443502 9443528 chr3L 9445330 9445365 S-element 12 1835 2.5 14.0 8.2 1.3 1863 chr3L 9443502 intron CG33926 + chr3L 9444434 intron CG33926 + chr3L 9445365 intron CG33926 + chr3L_12_9440001 chr3L_9440001 RAL-774_125 1456 chr3L 9501674 9501728 chr3L 9502210 9502264 roo 9 535 2.0 7.5 4.8 1.6 590 chr3L 9501674 intron path - chr3L 9501969 intron path - chr3L 9502264 intron path - chr3L_9_9500001 chr3L_9500001 RAL-774_125 1457 chr3L 9513738 9513769 chr3L 9513874 9513905 6 130 5.0 8.0 6.5 0.8 167 chr3L 9513738 intergenic CG33702 -,CG33700 - chr3L 9513822 intergenic CG33700 -,CG33702 - chr3L 9513905 intergenic CG33700 -,CG33702 - chr3L_6_9510001 chr3L_9510001 RAL-774_125 1458 chr3L 9533731 9533778 chr3L 9541322 9541387 412 6 7586 9.0 7.0 8.0 0.7 7656 chr3L 9533731 intergenic not near genes chr3L 9537559 intergenic not near genes chr3L 9541387 intergenic not near genes chr3L_6_9535001 chr3L_9535001 RAL-774_125 1459 chr3L 9571864 9571933 chr3L 9572262 9572268 jockey 10 391 4.5 5.0 4.8 1.7 404 chr3L 9571864 intron CG42673 + chr3L 9572066 intron CG42673 + chr3L 9572268 intron CG42673 + chr3L_10_9570001 chr3L_9570001 RAL-774_125 1460 chr3L 9575871 9575935 chr3L 9580999 9581038 jockey 16 5117 3.0 6.5 4.8 2.8 5167 chr3L 9575871 intron CG42673 + chr3L 9578454 intron CG42673 + chr3L 9581038 intron CG42673 + chr3L_16_9575001 chr3L_9575001 RAL-774_125 1461 chr3L 9637810 9637865 chr3L 9637942 9637997 13 129 4.5 5.5 5.0 2.2 187 chr3L 9637810 exon fry - chr3L 9637904 intron fry - chr3L 9637997 intron fry - chr3L_13_9635001 chr3L_9635001 RAL-774_125 1462 chr3L 9638975 9639043 chr3L 9639114 9639178 9 136 0.0 6.5 3.2 2.1 203 chr3L 9638975 intron,3` UTR fry -,CG8329 + chr3L 9639076 intron fry - chr3L 9639178 intron fry - chr3L_9_9635001 chr3L_9635001 RAL-774_125 1463 chr3L 9775338 9775406 chr3L 9775483 9775552 6 145 0.0 3.5 1.8 2.1 214 chr3L 9775338 intron CG8177 + chr3L 9775445 intron CG8177 + chr3L 9775552 intron CG8177 + chr3L_6_9775001 chr3L_9775001 RAL-774_125 1464 chr3L 9835463 9835499 chr3L 9835634 9835670 7 169 3.0 9.5 6.2 1.0 207 chr3L 9835463 intron I-2 - chr3L 9835566 intron I-2 - chr3L 9835670 intron I-2 - chr3L_7_9835001 chr3L_9835001 RAL-774_125 1465 chr3L 9848480 9848522 chr3L 9848601 9848621 6 111 4.0 1.0 2.5 1.7 141 chr3L 9848480 intron RasGAP1 - chr3L 9848550 intron RasGAP1 - chr3L 9848621 intron RasGAP1 - chr3L_6_9845001 chr3L_9845001 RAL-774_125 1466 chr3L 9871152 9871222 chr3L 9871291 9871335 12 136 0.5 0.5 0.5 8.0 183 chr3L 9871152 intergenic CG8108 + chr3L 9871244 intergenic not near genes chr3L 9871335 intergenic not near genes chr3L_12_9870001 chr3L_9870001 RAL-774_125 1467 chr3L 9904942 9904996 chr3L 9905068 9905096 8 119 4.5 3.5 4.0 1.6 154 chr3L 9904942 intergenic not near genes chr3L 9905019 intergenic not near genes chr3L 9905096 intergenic not near genes chr3L_8_9905001 chr3L_9905001 RAL-774_125 1468 chr3L 9929642 9929698 chr3L 9938453 9938529 roo 8 8828 3.5 3.0 3.2 1.9 8887 chr3L 9929642 intron CG34356 + chr3L 9934086 intron CG34356 + chr3L 9938529 intron CG34356 + chr3L_8_9930001 chr3L_9930001 RAL-774_125 1469 chr3L 9940120 9940164 chr3L 9940241 9940262 6 118 3.5 6.5 5.0 1.0 142 chr3L 9940120 intron CG34356 + chr3L 9940191 intron CG34356 + chr3L 9940262 intron CG34356 + chr3L_6_9940001 chr3L_9940001 RAL-774_125 1470 chr3L 9942351 9942417 chr3L 9942482 9942548 8 129 3.5 4.0 3.8 1.7 197 chr3L 9942351 intron CG34356 + chr3L 9942450 intron CG34356 + chr3L 9942548 intron CG34356 + chr3L_8_9940001 chr3L_9940001 RAL-774_125 1471 chr3L 9989060 9989133 chr3L 9989405 9989477 8 343 2.5 1.5 2.0 2.7 417 chr3L 9989060 intron dpr6 + chr3L 9989268 intron dpr6 + chr3L 9989477 intron dpr6 + chr3L_8_9985001 chr3L_9985001 RAL-774_125 1472 chr3L 10003116 10003178 chr3L 10003263 10003309 15 143 3.0 6.5 4.8 2.6 193 chr3L 10003116 intron dpr6 + chr3L 10003212 intron dpr6 + chr3L 10003309 intron dpr6 + chr3L_15_10000001 chr3L_10000001 RAL-774_125 1473 chr3L 10004054 10004114 chr3L 10004167 10004244 8 126 0.5 2.0 1.2 3.6 190 chr3L 10004054 exon dpr6 + chr3L 10004149 intron dpr6 + chr3L 10004244 intron dpr6 + chr3L_8_10000001 chr3L_10000001 RAL-774_125 1474 chr3L 10007174 10007203 chr3L 10007327 10007356 7 153 4.5 9.0 6.8 0.9 182 chr3L 10007174 intron dpr6 + chr3L 10007265 intron dpr6 + chr3L 10007356 intron dpr6 + chr3L_7_10005001 chr3L_10005001 RAL-774_125 1475 chr3L 10060084 10060113 chr3L 10067706 10067740 17.6 5 7626 6.5 5.5 6.0 0.7 7656 chr3L 10060084 intron dpr6 + chr3L 10063912 intron dpr6 + chr3L 10067740 intron dpr6 + chr3L_5_10060001 chr3L_10060001 RAL-774_125 1476 chr3L 10230065 10230135 chr3L 10230228 10230265 9 158 4.5 3.0 3.8 1.9 200 chr3L 10230065 intergenic not near genes chr3L 10230165 intergenic not near genes chr3L 10230265 intergenic not near genes chr3L_9_10230001 chr3L_10230001 RAL-774_125 1477 chr3L 10296999 10297072 chr3L 10297195 10297258 8 184 3.5 4.0 3.8 1.7 259 chr3L 10296999 intergenic not near genes chr3L 10297128 intergenic not near genes chr3L 10297258 intergenic not near genes chr3L_8_10295001 chr3L_10295001 RAL-774_125 1478 chr3L 10300002 10300062 chr3L 10300144 10300199 9 141 1.5 0.5 1.0 4.5 197 chr3L 10300002 intergenic not near genes chr3L 10300100 intergenic not near genes chr3L 10300199 intergenic not near genes chr3L_9_10300001 chr3L_10300001 RAL-774_125 1479 chr3L 10308705 10308762 chr3L 10308832 10308889 11 124 0.5 5.5 3.0 2.8 184 chr3L 10308705 intergenic not near genes chr3L 10308797 intergenic not near genes chr3L 10308889 intergenic not near genes chr3L_11_10305001 chr3L_10305001 RAL-774_125 1480 chr3L 10314086 10314146 chr3L 10314222 10314271 9 133 2.0 6.5 4.2 1.7 185 chr3L 10314086 intergenic not near genes chr3L 10314178 intergenic not near genes chr3L 10314271 intergenic not near genes chr3L_9_10310001 chr3L_10310001 RAL-774_125 1481 chr3L 10314436 10314507 chr3L 10314566 10314626 7 125 1.5 2.5 2.0 2.3 190 chr3L 10314436 intergenic not near genes chr3L 10314531 intergenic not near genes chr3L 10314626 intergenic not near genes chr3L_7_10310001 chr3L_10310001 RAL-774_125 1482 chr3L 10328065 10328117 chr3L 10328227 10328279 15 161 5.0 5.5 5.2 2.4 214 chr3L 10328065 intergenic not near genes chr3L 10328172 intergenic not near genes chr3L 10328279 intergenic not near genes chr3L_15_10325001 chr3L_10325001 RAL-774_125 1483 chr3L 10348604 10348658 chr3L 10348771 10348805 9 162 6.0 1.5 3.8 1.9 201 chr3L 10348604 intron CR44327 + chr3L 10348704 intron CR44327 + chr3L 10348805 intron CR44327 + chr3L_9_10345001 chr3L_10345001 RAL-774_125 1484 chr3L 10386343 10386418 chr3L 10386470 10386545 15 123 4.5 2.5 3.5 3.3 202 chr3L 10386343 intergenic CR45245 + chr3L 10386444 intergenic CR45245 + chr3L 10386545 5` UTR CR45245 + chr3L_15_10385001 chr3L_10385001 RAL-774_125 1485 chr3L 10414893 10414968 chr3L 10417313 10417377 Doc 10 2418 3.5 4.5 4.0 2.0 2484 chr3L 10414893 intergenic CG12362 + chr3L 10416135 intergenic not near genes chr3L 10417377 intergenic not near genes chr3L_10_10415001 chr3L_10415001 RAL-774_125 1486 chr3L 10417548 10417594 chr3L 10417662 10417721 9 110 9.0 6.0 7.5 1.1 173 chr3L 10417548 intergenic not near genes chr3L 10417634 intergenic not near genes chr3L 10417721 intergenic not near genes chr3L_9_10415001 chr3L_10415001 RAL-774_125 1487 chr3L 10440164 10440214 chr3L 10440296 10440341 13 130 6.0 4.5 5.2 2.1 177 chr3L 10440164 intergenic not near genes chr3L 10440252 intergenic not near genes chr3L 10440341 intergenic not near genes chr3L_13_10440001 chr3L_10440001 RAL-774_125 1488 chr3L 10469893 10469935 chr3L 10470019 10470056 9 124 8.5 1.5 5.0 1.5 163 chr3L 10469893 intergenic not near genes chr3L 10469974 intergenic not near genes chr3L 10470056 intergenic not near genes chr3L_9_10465001 chr3L_10465001 RAL-774_125 1489 chr3L 10529460 10529502 chr3L 10529586 10529628 7 119 5.0 2.5 3.8 1.5 168 chr3L 10529460 intron A2bp1 + chr3L 10529544 intron A2bp1 + chr3L 10529628 intron A2bp1 + chr3L_7_10525001 chr3L_10525001 RAL-774_125 1490 chr3L 10542256 10542282 chr3L 10543055 10543081 7 797 8.0 0.0 4.0 1.4 825 chr3L 10542256 intron A2bp1 + chr3L 10542668 intron A2bp1 + chr3L 10543081 intron A2bp1 + chr3L_7_10540001 chr3L_10540001 RAL-774_125 1491 chr3L 10584230 10584292 chr3L 10584367 10584386 9 131 6.5 3.5 5.0 1.5 156 chr3L 10584230 intron A2bp1 + chr3L 10584308 intron A2bp1 + chr3L 10584386 intron A2bp1 + chr3L_9_10580001 chr3L_10580001 RAL-774_125 1492 chr3L 10600435 10600469 chr3L 10600544 10600601 8 129 2.5 1.5 2.0 2.7 166 chr3L 10600435 intergenic not near genes chr3L 10600518 intergenic not near genes chr3L 10600601 intergenic not near genes chr3L_8_10600001 chr3L_10600001 RAL-774_125 1493 chr3L 10601161 10601190 chr3L 10601299 10601318 6 137 8.5 4.0 6.2 0.8 157 chr3L 10601161 intergenic not near genes chr3L 10601240 intergenic not near genes chr3L 10601318 intergenic not near genes chr3L_6_10600001 chr3L_10600001 RAL-774_125 1494 chr3L 10613128 10613156 chr3L 10613473 10613501 4 345 10.5 5.0 7.8 0.5 373 chr3L 10613128 intergenic not near genes chr3L 10613314 intergenic not near genes chr3L 10613501 intergenic not near genes chr3L_4_10610001 chr3L_10610001 RAL-774_125 1495 chr3L 10621817 10621872 chr3L 10621954 10621996 9 129 1.0 3.0 2.0 3.0 179 chr3L 10621817 intergenic not near genes chr3L 10621906 intergenic not near genes chr3L 10621996 intergenic not near genes chr3L_9_10620001 chr3L_10620001 RAL-774_125 1496 chr3L 10658073 10658196 chr3L 10658190 10658358 12 161 0.0 0.0 0.0 12.0 285 chr3L 10658073 intron CG32066 - chr3L 10658216 intron CG32066 - chr3L 10658358 intron CG32066 - chr3L_12_10655001 chr3L_10655001 RAL-774_125 1497 chr3L 10694872 10694916 chr3L 10695014 10695058 6 140 0.0 3.0 1.5 2.4 186 chr3L 10694872 intron NijA - chr3L 10694965 intron NijA - chr3L 10695058 exon NijA - chr3L_6_10690001 chr3L_10690001 RAL-774_125 1498 chr3L 10721393 10721413 chr3L 10721546 10721566 4 153 4.0 7.5 5.8 0.6 173 chr3L 10721393 intergenic not near genes chr3L 10721480 intergenic not near genes chr3L 10721566 intergenic not near genes chr3L_4_10720001 chr3L_10720001 RAL-774_125 1499 chr3L 10762811 10762859 chr3L 10762928 10762945 6 118 3.5 6.0 4.8 1.0 134 chr3L 10762811 intergenic not near genes chr3L 10762878 intergenic not near genes chr3L 10762945 intergenic not near genes chr3L_6_10760001 chr3L_10760001 RAL-774_125 1500 chr3L 10770475 10770500 chr3L 10770601 10770631 4 130 0.5 0.5 0.5 2.7 156 chr3L 10770475 intergenic not near genes chr3L 10770553 intergenic not near genes chr3L 10770631 intergenic not near genes chr3L_4_10770001 chr3L_10770001 RAL-774_125 1501 chr3L 10778772 10778832 chr3L 10778898 10778951 8 122 1.0 6.0 3.5 1.8 179 chr3L 10778772 intergenic not near genes chr3L 10778862 intergenic not near genes chr3L 10778951 intergenic not near genes chr3L_8_10775001 chr3L_10775001 RAL-774_125 1502 chr3L 10783640 10783663 chr3L 10783774 10783797 6 132 16.0 7.5 11.8 0.5 157 chr3L 10783640 intergenic not near genes chr3L 10783718 intergenic not near genes chr3L 10783797 intergenic not near genes chr3L_6_10780001 chr3L_10780001 RAL-774_125 1503 chr3L 10783664 10783681 chr3L 10783763 10783805 9 125 12.0 7.5 9.8 0.8 141 chr3L 10783664 intergenic not near genes chr3L 10783734 intergenic not near genes chr3L 10783805 intergenic not near genes chr3L_9_10780001 chr3L_10780001 RAL-774_125 1504 chr3L 10868788 10868801 chr3L 10868920 10868933 6 132 0.5 6.0 3.2 1.4 145 chr3L 10868788 intron tna + chr3L 10868860 intron tna + chr3L 10868933 intron tna + chr3L_6_10865001 chr3L_10865001 RAL-774_125 1505 chr3L 10916070 10916118 chr3L 10916199 10916247 7 129 3.5 2.0 2.8 1.8 177 chr3L 10916070 intergenic not near genes chr3L 10916158 intergenic not near genes chr3L 10916247 intergenic not near genes chr3L_7_10915001 chr3L_10915001 RAL-774_125 1506 chr3L 10937228 10937254 chr3L 10937360 10937375 5 129 1.0 0.0 0.5 3.3 147 chr3L 10937228 intergenic not near genes chr3L 10937302 intergenic not near genes chr3L 10937375 intergenic not near genes chr3L_5_10935001 chr3L_10935001 RAL-774_125 1507 chr3L 10941320 10941384 chr3L 10941469 10941533 7 149 1.5 0.0 0.8 3.9 213 chr3L 10941320 intergenic not near genes chr3L 10941426 intergenic not near genes chr3L 10941533 intergenic not near genes chr3L_7_10940001 chr3L_10940001 RAL-774_125 1508 chr3L 10942045 10942073 chr3L 10942145 10942156 5 107 6.0 5.0 5.5 0.8 111 chr3L 10942045 intergenic not near genes chr3L 10942100 intergenic not near genes chr3L 10942156 intergenic not near genes chr3L_5_10940001 chr3L_10940001 RAL-774_125 1509 chr3L 10951254 10951291 chr3L 10951380 10951412 4 125 0.0 2.0 1.0 2.0 158 chr3L 10951254 intergenic not near genes chr3L 10951333 intergenic not near genes chr3L 10951412 intergenic not near genes chr3L_4_10950001 chr3L_10950001 RAL-774_125 1510 chr3L 10956954 10957024 chr3L 10957080 10957150 18 124 4.5 5.5 5.0 3.0 196 chr3L 10956954 intergenic not near genes chr3L 10957052 intergenic not near genes chr3L 10957150 intergenic not near genes chr3L_18_10955001 chr3L_10955001 RAL-774_125 1511 chr3L 11042071 11042133 chr3L 11042260 11042322 5 189 6.5 0.0 3.2 1.2 251 chr3L 11042071 intron CG43693 - chr3L 11042196 intron CG43693 - chr3L 11042322 intron CG43693 - chr3L_5_11040001 chr3L_11040001 RAL-774_125 1512 chr3L 11053610 11053643 chr3L 11053749 11053778 11 137 2.0 0.0 1.0 5.5 168 chr3L 11053610 intergenic CG7888 + chr3L 11053694 intergenic CG7888 + chr3L 11053778 intergenic CG7888 + chr3L_11_11050001 chr3L_11050001 RAL-774_125 1513 chr3L 11087030 11087088 chr3L 11088857 11088927 S-element 5 1834 3.0 2.0 2.5 1.4 1897 chr3L 11087030 intron JIL-1 - chr3L 11087978 intron JIL-1 - chr3L 11088927 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-774_125 1514 chr3L 11131760 11131773 chr3L 11132074 11132081 4 311 5.5 2.5 4.0 0.8 321 chr3L 11131760 intron CG42575 + chr3L 11131920 intron,3` UTR CG42575 +,CG32074 - chr3L 11132081 intron,exon CG42575 +,CG32074 - chr3L_4_11130001 chr3L_11130001 RAL-774_125 1515 chr3L 11135484 11135783 chr3L 11135764 11135913 9 214 0.0 0.0 0.0 9.0 429 chr3L 11135484 intergenic CG14143 + chr3L 11135698 intergenic CG14143 +,CG32082 + chr3L 11135913 intergenic CG32082 +,CG14143 + chr3L_9_11135001 chr3L_11135001 RAL-774_125 1516 chr3L 11135789 11135800 chr3L 11135920 11135929 4 130 0.0 7.0 3.5 0.9 140 chr3L 11135789 intergenic CG32082 +,CG14143 + chr3L 11135859 intergenic CG32082 +,CG14143 + chr3L 11135929 intergenic CG32082 +,CG14143 + chr3L_4_11135001 chr3L_11135001 RAL-774_125 1517 chr3L 11141411 11141460 chr3L 11141556 11141605 13 144 5.5 0.0 2.8 3.4 194 chr3L 11141411 intron CG32082 + chr3L 11141508 intron CG32082 + chr3L 11141605 intron CG32082 + chr3L_13_11140001 chr3L_11140001 RAL-774_125 1518 chr3L 11224541 11224548 chr3L 11224712 11224714 4 169 0.0 6.5 3.2 1.0 173 chr3L 11224541 intron CG42671 + chr3L 11224628 intron CG42671 + chr3L 11224714 intron CG42671 + chr3L_4_11220001 chr3L_11220001 RAL-774_125 1519 chr3L 11229965 11230015 chr3L 11230085 11230162 9 141 5.0 1.5 3.2 2.1 197 chr3L 11229965 intergenic CG42671 + chr3L 11230064 intergenic CG42671 + chr3L 11230162 intergenic not near genes chr3L_9_11230001 chr3L_11230001 RAL-774_125 1520 chr3L 11264428 11264477 chr3L 11271427 11271479 17.6 7 7001 6.5 3.5 5.0 1.2 7051 chr3L 11264428 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271479 intergenic not near genes chr3L_7_11265001 chr3L_11265001 RAL-774_125 1521 chr3L 11277417 11277464 chr3L 11278458 11278503 Rt1a 7 1035 2.5 5.5 4.0 1.4 1086 chr3L 11277417 intergenic not near genes chr3L 11277960 intergenic not near genes chr3L 11278503 intergenic not near genes chr3L_7_11275001 chr3L_11275001 RAL-774_125 1522 chr3L 11279707 11279746 chr3L 11279808 11279871 7 115 5.5 4.5 5.0 1.2 164 chr3L 11279707 intergenic not near genes chr3L 11279789 intergenic not near genes chr3L 11279871 intergenic not near genes chr3L_7_11275001 chr3L_11275001 RAL-774_125 1523 chr3L 11300521 11300584 chr3L 11300653 11300692 10 128 4.0 3.0 3.5 2.2 171 chr3L 11300521 intergenic not near genes chr3L 11300606 intergenic not near genes chr3L 11300692 intergenic not near genes chr3L_10_11300001 chr3L_11300001 RAL-774_125 1524 chr3L 11329653 11329713 chr3L 11332902 11332968 jockey 6 3249 6.0 6.0 6.0 0.9 3315 chr3L 11329653 intergenic not near genes chr3L 11331310 intergenic not near genes chr3L 11332968 intergenic not near genes chr3L_6_11330001 chr3L_11330001 RAL-774_125 1525 chr3L 11348968 11349044 chr3L 11349112 11349188 9 139 4.0 4.5 4.2 1.7 220 chr3L 11348968 intergenic CR45251 - chr3L 11349078 intergenic CR45251 - chr3L 11349188 intergenic CR45251 - chr3L_9_11345001 chr3L_11345001 RAL-774_125 1526 chr3L 11456861 11456904 chr3L 11457010 11457053 4 146 8.0 6.0 7.0 0.5 192 chr3L 11456861 intergenic CG12289 - chr3L 11456957 intergenic CG12289 - chr3L 11457053 intergenic CG12289 - chr3L_4_11455001 chr3L_11455001 RAL-774_125 1527 chr3L 11548527 11548585 chr3L 11548657 11548715 18 129 4.5 5.0 4.8 3.1 188 chr3L 11548527 intron Mob2 - chr3L 11548621 intron Mob2 - chr3L 11548715 intron Mob2 - chr3L_18_11545001 chr3L_11545001 RAL-774_125 1528 chr3L 11553680 11553728 chr3L 11553831 11553880 14 149 5.5 4.5 5.0 2.3 200 chr3L 11553680 intron Mob2 - chr3L 11553780 intron Mob2 - chr3L 11553880 intron Mob2 - chr3L_14_11550001 chr3L_11550001 RAL-774_125 1529 chr3L 11580614 11580654 chr3L 11580752 11580787 6 137 0.0 4.0 2.0 2.0 173 chr3L 11580614 intergenic CG43391 - chr3L 11580700 intergenic CG43391 - chr3L 11580787 intergenic CG43391 - chr3L_6_11580001 chr3L_11580001 RAL-774_125 1530 chr3L 11622112 11622167 chr3L 11622265 11622325 17 154 8.5 7.5 8.0 1.9 213 chr3L 11622112 exon CG6084 - chr3L 11622218 intron CG6084 - chr3L 11622325 intron CG6084 - chr3L_17_11620001 chr3L_11620001 RAL-774_125 1531 chr3L 11663701 11663751 chr3L 11663876 11663919 9 171 4.5 0.0 2.2 2.8 218 chr3L 11663701 intron CG32085 - chr3L 11663810 intron CG32085 - chr3L 11663919 intron CG32085 - chr3L_9_11660001 chr3L_11660001 RAL-774_125 1532 chr3L 11673925 11673942 chr3L 11674051 11674068 4 124 6.5 0.0 3.2 1.0 143 chr3L 11673925 intron CG32085 - chr3L 11673996 intron CG32085 - chr3L 11674068 intron CG32085 - chr3L_4_11670001 chr3L_11670001 RAL-774_125 1533 chr3L 11678053 11678114 chr3L 11678189 11678251 8 137 4.0 6.0 5.0 1.3 198 chr3L 11678053 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678251 intron CG32085 - chr3L_8_11675001 chr3L_11675001 RAL-774_125 1534 chr3L 11711712 11711724 chr3L 11711851 11711858 6 140 4.5 6.5 5.5 0.9 146 chr3L 11711712 intergenic crim - chr3L 11711785 intergenic crim -,CG14132 - chr3L 11711858 intergenic CG14132 -,crim - chr3L_6_11710001 chr3L_11710001 RAL-774_125 1535 chr3L 11723047 11723109 chr3L 11727892 11727954 Doc 15 4844 4.0 5.5 4.8 2.6 4907 chr3L 11723047 3` UTR Bmcp + chr3L 11725500 intron Bmcp + chr3L 11727954 3` UTR Bmcp + chr3L_15_11725001 chr3L_11725001 RAL-774_125 1536 chr3L 11743978 11744040 chr3L 11744136 11744188 8 156 4.0 1.0 2.5 2.3 210 chr3L 11743978 exon CG6024 - chr3L 11744083 intron CG6024 - chr3L 11744188 intron CG6024 - chr3L_8_11740001 chr3L_11740001 RAL-774_125 1537 chr3L 11822280 11822301 chr3L 11822413 11822434 8 130 4.0 0.0 2.0 2.7 154 chr3L 11822280 intergenic CG5946 -,CG11597 - chr3L 11822357 intergenic CG5946 -,CG11597 -,RpL10Ab + chr3L 11822434 intergenic CG5946 -,CG11597 -,RpL10Ab + chr3L_8_11820001 chr3L_11820001 RAL-774_125 1538 chr3L 11826529 11826552 chr3L 11826687 11826705 6 155 4.0 4.5 4.2 1.2 176 chr3L 11826529 intergenic CycA - chr3L 11826617 intergenic CycA - chr3L 11826705 intergenic CycA - chr3L_6_11825001 chr3L_11825001 RAL-774_125 1539 chr3L 11826560 11826580 chr3L 11826662 11826738 4 143 2.5 2.5 2.5 1.1 178 chr3L 11826560 intergenic CycA - chr3L 11826649 intergenic CycA - chr3L 11826738 3` UTR CycA - chr3L_4_11825001 chr3L_11825001 RAL-774_125 1540 chr3L 11864509 11864582 chr3L 11865854 11865922 pogo 11 1342 5.5 5.5 5.5 1.7 1413 chr3L 11864509 intron CG44837 - chr3L 11865216 intron CG44837 - chr3L 11865922 intron CG44837 - chr3L_11_11865001 chr3L_11865001 RAL-774_125 1541 chr3L 11887217 11887255 chr3L 11887359 11887392 7 143 6.0 0.0 3.0 1.8 175 chr3L 11887217 intron CG44837 - chr3L 11887304 intron,3` UTR CG44837 -,CG5897 - chr3L 11887392 intron,3` UTR CG44837 -,CG5897 - chr3L_7_11885001 chr3L_11885001 RAL-774_125 1542 chr3L 11902085 11902135 chr3L 11902357 11902407 9 272 21.5 26.0 23.8 0.4 322 chr3L 11902085 intron CG44837 - chr3L 11902246 intron CG44837 - chr3L 11902407 intron CG44837 - chr3L_9_11900001 chr3L_11900001 RAL-774_125 1543 chr3L 11943447 11943514 chr3L 11943598 11943665 14 147 4.0 3.0 3.5 3.1 218 chr3L 11943447 3` UTR Rpt4R + chr3L 11943556 intergenic Rpt4R +,CG5883 - chr3L 11943665 3` UTR CG5883 - chr3L_14_11940001 chr3L_11940001 RAL-774_125 1544 chr3L 11984529 11984591 chr3L 11984665 11984716 7 135 3.5 1.5 2.5 2.0 187 chr3L 11984529 intergenic CG6938 + chr3L 11984622 intergenic CG6938 + chr3L 11984716 intergenic CG6938 + chr3L_7_11980001 chr3L_11980001 RAL-774_125 1545 chr3L 12013863 12013938 chr3L 12014004 12014078 17 136 3.5 3.5 3.5 3.8 215 chr3L 12013863 intron rols - chr3L 12013970 intron rols - chr3L 12014078 intron rols - chr3L_17_12010001 chr3L_12010001 RAL-774_125 1546 chr3L 12052675 12052708 chr3L 12052809 12052847 10 137 10.0 9.0 9.5 1.0 172 chr3L 12052675 intron rols - chr3L 12052761 intron rols - chr3L 12052847 intron rols - chr3L_10_12050001 chr3L_12050001 RAL-774_125 1547 chr3L 12052710 12052730 chr3L 12052799 12052869 8 131 6.0 7.5 6.8 1.0 159 chr3L 12052710 intron rols - chr3L 12052790 intron rols - chr3L 12052869 intron rols - chr3L_8_12050001 chr3L_12050001 RAL-774_125 1548 chr3L 12106652 12106725 chr3L 12106891 12106951 11 235 2.0 2.5 2.2 3.4 299 chr3L 12106652 intergenic not near genes chr3L 12106802 intergenic not near genes chr3L 12106951 intergenic not near genes chr3L_11_12105001 chr3L_12105001 RAL-774_125 1549 chr3L 12170745 12170817 chr3L 12170877 12170949 13 131 2.0 2.0 2.0 4.3 204 chr3L 12170745 intron Rh7 - chr3L 12170847 intron Rh7 - chr3L 12170949 intron Rh7 - chr3L_13_12170001 chr3L_12170001 RAL-774_125 1550 chr3L 12204340 12204410 chr3L 12204481 12204551 16 139 2.5 6.0 4.2 3.1 211 chr3L 12204340 3` UTR CG5626 - chr3L 12204446 intron CG5626 - chr3L 12204551 intron CG5626 - chr3L_16_12200001 chr3L_12200001 RAL-774_125 1551 chr3L 12249996 12250008 chr3L 12250146 12250150 4 164 1.0 3.5 2.2 1.2 154 chr3L 12249996 intron app - chr3L 12250073 intron app - chr3L 12250150 intron app - chr3L_4_12250001 chr3L_12250001 RAL-774_125 1552 chr3L 12313979 12314017 chr3L 12314109 12314147 9 126 1.0 3.5 2.2 2.8 168 chr3L 12313979 intergenic not near genes chr3L 12314063 intergenic not near genes chr3L 12314147 intergenic not near genes chr3L_9_12310001 chr3L_12310001 RAL-774_125 1553 chr3L 12369488 12369556 chr3L 12369628 12369696 14 139 1.0 7.0 4.0 2.8 208 chr3L 12369488 intron Ncc69 - chr3L 12369592 intron Ncc69 - chr3L 12369696 intron Ncc69 - chr3L_14_12365001 chr3L_12365001 RAL-774_125 1554 chr3L 12381506 12381550 chr3L 12381634 12381678 5 127 1.0 3.0 2.0 1.7 172 chr3L 12381506 intron Ncc69 - chr3L 12381592 intron Ncc69 - chr3L 12381678 intron Ncc69 - chr3L_5_12380001 chr3L_12380001 RAL-774_125 1555 chr3L 12412882 12412925 chr3L 12413014 12413057 8 132 4.5 6.0 5.2 1.3 175 chr3L 12412882 intron CG32103 - chr3L 12412970 intron CG32103 - chr3L 12413057 intron CG32103 - chr3L_8_12410001 chr3L_12410001 RAL-774_125 1556 chr3L 12476253 12476315 chr3L 12476375 12476428 12 124 0.5 3.5 2.0 4.0 175 chr3L 12476253 intron CG10663 - chr3L 12476340 intron CG10663 - chr3L 12476428 intron CG10663 - chr3L_12_12475001 chr3L_12475001 RAL-774_125 1557 chr3L 12563958 12564017 chr3L 12564219 12564283 10 263 3.5 4.0 3.8 2.1 325 chr3L 12563958 intron sowah - chr3L 12564120 intron sowah - chr3L 12564283 intron sowah - chr3L_10_12560001 chr3L_12560001 RAL-774_125 1558 chr3L 12614559 12614584 chr3L 12614747 12614768 7 187 0.0 4.5 2.2 2.2 209 chr3L 12614559 intron caup + chr3L 12614664 intron caup + chr3L 12614768 intron caup + chr3L_7_12610001 chr3L_12610001 RAL-774_125 1559 chr3L 12620933 12620968 chr3L 12621080 12621109 5 141 5.0 5.0 5.0 0.8 176 chr3L 12620933 3` UTR caup + chr3L 12621021 3` UTR caup + chr3L 12621109 3` UTR caup + chr3L_5_12620001 chr3L_12620001 RAL-774_125 1560 chr3L 12626111 12626156 chr3L 12626270 12626315 10 158 3.5 4.5 4.0 2.0 204 chr3L 12626111 intergenic not near genes chr3L 12626213 intergenic not near genes chr3L 12626315 intergenic not near genes chr3L_10_12625001 chr3L_12625001 RAL-774_125 1561 chr3L 12689623 12689666 chr3L 12689754 12689797 4 127 0.5 2.0 1.2 1.8 174 chr3L 12689623 intergenic not near genes chr3L 12689710 intergenic not near genes chr3L 12689797 intergenic not near genes chr3L_4_12685001 chr3L_12685001 RAL-774_125 1562 chr3L 12722257 12722310 chr3L 12722389 12722414 4 120 1.0 6.5 3.8 0.8 157 chr3L 12722257 intergenic not near genes chr3L 12722336 intergenic not near genes chr3L 12722414 intergenic not near genes chr3L_4_12720001 chr3L_12720001 RAL-774_125 1563 chr3L 12727987 12728017 chr3L 12728121 12728151 8 134 6.0 6.5 6.2 1.1 164 chr3L 12727987 intergenic not near genes chr3L 12728069 intergenic not near genes chr3L 12728151 intergenic not near genes chr3L_8_12725001 chr3L_12725001 RAL-774_125 1564 chr3L 12801932 12802010 chr3L 12802058 12802136 10 124 3.5 5.0 4.2 1.9 204 chr3L 12801932 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802136 intron Atg1 - chr3L_10_12800001 chr3L_12800001 RAL-774_125 1565 chr3L 12838981 12838989 chr3L 12839108 12839116 4 127 5.5 6.5 6.0 0.6 135 chr3L 12838981 intron CG10960 - chr3L 12839048 intron CG10960 - chr3L 12839116 intron CG10960 - chr3L_4_12835001 chr3L_12835001 RAL-774_125 1566 chr3L 12874885 12874947 chr3L 12877222 12877289 jockey 8 2341 3.5 4.5 4.0 1.6 2404 chr3L 12874885 intergenic not near genes chr3L 12876087 intergenic not near genes chr3L 12877289 intergenic not near genes chr3L_8_12875001 chr3L_12875001 RAL-774_125 1567 chr3L 12892880 12892904 chr3L 12893035 12893050 4 150 4.5 3.5 4.0 0.8 170 chr3L 12892880 intron CG14118 + chr3L 12892965 intron CG14118 + chr3L 12893050 intron CG14118 + chr3L_4_12890001 chr3L_12890001 RAL-774_125 1568 chr3L 12894767 12894809 chr3L 12894890 12894937 6 126 6.0 6.0 6.0 0.9 170 chr3L 12894767 intergenic CG14118 + chr3L 12894852 intergenic CG14118 + chr3L 12894937 intergenic CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-774_125 1569 chr3L 12915680 12915739 chr3L 12916096 12916166 7 424 1.5 1.5 1.5 2.8 486 chr3L 12915680 intergenic not near genes chr3L 12915923 intergenic not near genes chr3L 12916166 intergenic not near genes chr3L_7_12915001 chr3L_12915001 RAL-774_125 1570 chr3L 12919236 12919254 chr3L 12924759 12924775 Rt1c 4 5520 8.0 2.5 5.2 0.6 5539 chr3L 12919236 intergenic not near genes chr3L 12922006 intergenic not near genes chr3L 12924775 intergenic not near genes chr3L_4_12920001 chr3L_12920001 RAL-774_125 1571 chr3L 12919257 12919304 chr3L 12924749 12924831 Rt1c 4 5508 3.0 1.0 2.0 1.3 5574 chr3L 12919257 intergenic not near genes chr3L 12922044 intergenic not near genes chr3L 12924831 intergenic not near genes chr3L_4_12920001 chr3L_12920001 RAL-774_125 1572 chr3L 12942157 12942194 chr3L 12942308 12942345 7 150 2.0 7.5 4.8 1.2 188 chr3L 12942157 intergenic not near genes chr3L 12942251 intergenic not near genes chr3L 12942345 intergenic not near genes chr3L_7_12940001 chr3L_12940001 RAL-774_125 1573 chr3L 12955414 12955454 chr3L 12955545 12955594 15 134 3.0 6.0 4.5 2.7 180 chr3L 12955414 intergenic not near genes chr3L 12955504 intergenic not near genes chr3L 12955594 intergenic not near genes chr3L_15_12955001 chr3L_12955001 RAL-774_125 1574 chr3L 12957749 12957801 chr3L 12962271 12962333 copia 11 4525 5.0 3.5 4.2 2.1 4584 chr3L 12957749 intergenic not near genes chr3L 12960041 intergenic not near genes chr3L 12962333 intergenic not near genes chr3L_11_12960001 chr3L_12960001 RAL-774_125 1575 chr3L 12978469 12978731 chr3L 12978601 12978860 17 128 11.5 5.0 8.2 1.8 391 chr3L 12978469 intergenic not near genes chr3L 12978664 intergenic not near genes chr3L 12978860 intergenic not near genes chr3L_17_12975001 chr3L_12975001 RAL-774_125 1576 chr3L 12981123 12981178 chr3L 12981255 12981316 10 133 2.0 3.0 2.5 2.9 193 chr3L 12981123 intergenic not near genes chr3L 12981220 intergenic not near genes chr3L 12981316 intergenic not near genes chr3L_10_12980001 chr3L_12980001 RAL-774_125 1577 chr3L 13007664 13007724 chr3L 13007781 13007859 8 120 3.5 4.0 3.8 1.7 195 chr3L 13007664 exon CG11263 + chr3L 13007762 3` UTR CG11263 + chr3L 13007859 3` UTR CG11263 + chr3L_8_13005001 chr3L_13005001 RAL-774_125 1578 chr3L 13050529 13050581 chr3L 13050658 13050710 7 127 5.5 2.5 4.0 1.4 181 chr3L 13050529 intergenic not near genes chr3L 13050620 intergenic not near genes chr3L 13050710 intergenic not near genes chr3L_7_13050001 chr3L_13050001 RAL-774_125 1579 chr3L 13055800 13056007 chr3L 13055939 13056064 10 123 4.5 14.5 9.5 1.0 264 chr3L 13055800 intergenic not near genes chr3L 13055932 intergenic not near genes chr3L 13056064 intergenic not near genes chr3L_10_13055001 chr3L_13055001 RAL-774_125 1580 chr3L 13206189 13206259 chr3L 13206321 13206389 12 129 2.5 6.0 4.2 2.3 200 chr3L 13206189 intergenic not near genes chr3L 13206289 intergenic not near genes chr3L 13206389 intergenic not near genes chr3L_12_13205001 chr3L_13205001 RAL-774_125 1581 chr3L 13245049 13245097 chr3L 13245231 13245237 8 174 8.5 4.0 6.2 1.1 188 chr3L 13245049 intron caps + chr3L 13245143 intron caps + chr3L 13245237 intron caps + chr3L_8_13245001 chr3L_13245001 RAL-774_125 1582 chr3L 13267241 13267287 chr3L 13267404 13267450 7 161 4.0 0.0 2.0 2.3 209 chr3L 13267241 intron caps + chr3L 13267346 intron caps + chr3L 13267450 intron caps + chr3L_7_13265001 chr3L_13265001 RAL-774_125 1583 chr3L 13269247 13269301 chr3L 13269383 13269437 9 133 6.0 6.5 6.2 1.2 190 chr3L 13269247 intron caps + chr3L 13269342 intron caps + chr3L 13269437 intron caps + chr3L_9_13265001 chr3L_13265001 RAL-774_125 1584 chr3L 13315817 13315857 chr3L 13315954 13315974 5 133 4.0 1.0 2.5 1.4 157 chr3L 13315817 intergenic not near genes chr3L 13315896 intergenic not near genes chr3L 13315974 intergenic not near genes chr3L_5_13315001 chr3L_13315001 RAL-774_125 1585 chr3L 13375862 13375909 chr3L 13375992 13376018 14 126 9.0 5.0 7.0 1.8 156 chr3L 13375862 intergenic not near genes chr3L 13375940 intergenic not near genes chr3L 13376018 intergenic not near genes chr3L_14_13375001 chr3L_13375001 RAL-774_125 1586 chr3L 13379649 13379684 chr3L 13379869 13379904 4 220 3.5 5.0 4.2 0.8 255 chr3L 13379649 intron CG14111 + chr3L 13379776 intron CG14111 + chr3L 13379904 intron CG14111 + chr3L_4_13375001 chr3L_13375001 RAL-774_125 1587 chr3L 13392718 13392745 chr3L 13392851 13392878 4 133 6.0 0.0 3.0 1.0 160 chr3L 13392718 intergenic not near genes chr3L 13392798 intergenic not near genes chr3L 13392878 intergenic not near genes chr3L_4_13390001 chr3L_13390001 RAL-774_125 1588 chr3L 13400479 13400539 chr3L 13400605 13400665 4 126 3.0 4.0 3.5 0.9 186 chr3L 13400479 intron sens - chr3L 13400572 intron sens - chr3L 13400665 intron sens - chr3L_4_13400001 chr3L_13400001 RAL-774_125 1589 chr3L 13525114 13525175 chr3L 13532960 13533000 roo 28 7839 5.0 4.5 4.8 4.8 7886 chr3L 13525114 intergenic not near genes chr3L 13529057 intergenic not near genes chr3L 13533000 intergenic not near genes chr3L_28_13525001 chr3L_13525001 RAL-774_125 1590 chr3L 13574578 13574620 chr3L 13580138 13580160 Rt1c 6 5551 4.5 4.5 4.5 1.1 5582 chr3L 13574578 intron bru-3 - chr3L 13577369 intron bru-3 - chr3L 13580160 intron bru-3 - chr3L_6_13575001 chr3L_13575001 RAL-774_125 1591 chr3L 13677482 13677552 chr3L 13677609 13677674 13 125 6.5 3.5 5.0 2.2 192 chr3L 13677482 intron bru-3 - chr3L 13677578 intron bru-3 - chr3L 13677674 intron bru-3 - chr3L_13_13675001 chr3L_13675001 RAL-774_125 1592 chr3L 13804511 13804560 chr3L 13822837 13822896 roo 11 18332 6.0 6.5 6.2 1.5 18385 chr3L 13804511 intergenic not near genes chr3L 13813704 intergenic not near genes chr3L 13822896 intergenic not near genes chr3L_11_13810001 chr3L_13810001 RAL-774_125 1593 chr3L 13841105 13841159 chr3L 13841242 13841296 8 136 3.0 2.5 2.8 2.1 191 chr3L 13841105 3` UTR CG8757 - chr3L 13841200 3` UTR CG8757 - chr3L 13841296 exon CG8757 - chr3L_8_13840001 chr3L_13840001 RAL-774_125 1594 chr3L 13865587 13865662 chr3L 13865717 13865791 15 123 3.0 3.5 3.2 3.6 204 chr3L 13865587 intron CG8745 - chr3L 13865689 intron CG8745 - chr3L 13865791 intron CG8745 - chr3L_15_13865001 chr3L_13865001 RAL-774_125 1595 chr3L 13931288 13931369 chr3L 13931441 13931523 11 153 1.5 2.5 2.0 3.7 235 chr3L 13931288 intron Gl + chr3L 13931406 intron Gl + chr3L 13931523 intron Gl + chr3L_11_13930001 chr3L_13930001 RAL-774_125 1596 chr3L 13957861 13957903 chr3L 13958078 13958124 11 231 4.5 6.0 5.2 1.8 263 chr3L 13957861 intron CG32137 + chr3L 13957992 intron CG32137 + chr3L 13958124 intron CG32137 + chr3L_11_13955001 chr3L_13955001 RAL-774_125 1597 chr3L 13993974 13994008 chr3L 13994094 13994134 4 127 1.0 3.0 2.0 1.3 160 chr3L 13993974 intergenic 26-29-p + chr3L 13994054 intergenic 26-29-p + chr3L 13994134 intergenic 26-29-p + chr3L_4_13990001 chr3L_13990001 RAL-774_125 1598 chr3L 14061623 14061672 chr3L 14061758 14061808 4 136 4.5 3.5 4.0 0.8 185 chr3L 14061623 intron CG32138 + chr3L 14061716 intron CG32138 + chr3L 14061808 intron CG32138 + chr3L_4_14060001 chr3L_14060001 RAL-774_125 1599 chr3L 14165146 14165211 chr3L 14165274 14165339 7 123 6.0 4.0 5.0 1.2 193 chr3L 14165146 intergenic not near genes chr3L 14165242 intergenic not near genes chr3L 14165339 intergenic not near genes chr3L_7_14165001 chr3L_14165001 RAL-774_125 1600 chr3L 14194672 14194728 chr3L 14194798 14194854 7 126 4.0 0.0 2.0 2.3 182 chr3L 14194672 intron nuf + chr3L 14194763 intron nuf + chr3L 14194854 intron nuf + chr3L_7_14190001 chr3L_14190001 RAL-774_125 1601 chr3L 14196373 14196443 chr3L 14196508 14196568 9 127 2.0 3.0 2.5 2.6 195 chr3L 14196373 intron nuf + chr3L 14196470 intron nuf + chr3L 14196568 intron nuf + chr3L_9_14195001 chr3L_14195001 RAL-774_125 1602 chr3L 14235831 14235898 chr3L 14235967 14236029 20 134 5.5 3.0 4.2 3.8 198 chr3L 14235831 5` UTR CG34244 - chr3L 14235930 5` UTR CG34244 - chr3L 14236029 intergenic CG34244 - chr3L_20_14235001 chr3L_14235001 RAL-774_125 1603 chr3L 14247372 14247385 chr3L 14247759 14247772 5 387 15.0 9.5 12.2 0.4 400 chr3L 14247372 intergenic CR44560 + chr3L 14247572 intergenic not near genes chr3L 14247772 intergenic not near genes chr3L_5_14245001 chr3L_14245001 RAL-774_125 1604 chr3L 14247386 14247445 chr3L 14247757 14247784 23 379 7.0 9.0 8.0 2.6 398 chr3L 14247386 intergenic CR44560 + chr3L 14247585 intergenic not near genes chr3L 14247784 intergenic not near genes chr3L_23_14245001 chr3L_14245001 RAL-774_125 1605 chr3L 14267339 14267387 chr3L 14271818 14271861 F-element 11 4483 5.5 2.5 4.0 2.2 4522 chr3L 14267339 intergenic not near genes chr3L 14269600 intergenic not near genes chr3L 14271861 intergenic not near genes chr3L_11_14265001 chr3L_14265001 RAL-774_125 1606 chr3L 14282537 14282605 chr3L 14282667 14282727 14 124 5.5 9.0 7.2 1.7 190 chr3L 14282537 intron fz + chr3L 14282632 intron fz + chr3L 14282727 intron fz + chr3L_14_14280001 chr3L_14280001 RAL-774_125 1607 chr3L 14286620 14286675 chr3L 14286750 14286802 5 125 1.5 3.5 2.5 1.4 182 chr3L 14286620 intron fz + chr3L 14286711 intron fz + chr3L 14286802 intron fz + chr3L_5_14285001 chr3L_14285001 RAL-774_125 1608 chr3L 14295940 14295995 chr3L 14296473 14296526 roo 11 532 2.0 2.5 2.2 3.4 586 chr3L 14295940 intron fz + chr3L 14296233 intron fz + chr3L 14296526 intron fz + chr3L_11_14295001 chr3L_14295001 RAL-774_125 1609 chr3L 14312027 14312042 chr3L 14316850 14316876 X-element 6 4837 2.0 2.5 2.2 1.9 4849 chr3L 14312027 exon fz + chr3L 14314452 intron fz + chr3L 14316876 intron fz + chr3L_6_14310001 chr3L_14310001 RAL-774_125 1610 chr3L 14341404 14341437 chr3L 14341587 14341616 5 182 0.0 3.5 1.8 1.8 212 chr3L 14341404 intron fz + chr3L 14341510 intron fz + chr3L 14341616 intron fz + chr3L_5_14340001 chr3L_14340001 RAL-774_125 1611 chr3L 14356478 14356545 chr3L 14356606 14356675 12 124 4.5 4.0 4.2 2.3 197 chr3L 14356478 intron fz + chr3L 14356576 intron fz + chr3L 14356675 intron fz + chr3L_12_14355001 chr3L_14355001 RAL-774_125 1612 chr3L 14370002 14370043 chr3L 14370107 14370173 12 119 8.5 4.5 6.5 1.6 171 chr3L 14370002 intergenic CG13481 - chr3L 14370088 intergenic CG13481 - chr3L 14370173 intergenic CG13481 - chr3L_12_14370001 chr3L_14370001 RAL-774_125 1613 chr3L 14441579 14441623 chr3L 14441751 14441787 7 185 4.0 3.5 3.8 1.5 208 chr3L 14441579 intron bbg - chr3L 14441683 intron bbg - chr3L 14441787 intron bbg - chr3L_7_14440001 chr3L_14440001 RAL-774_125 1614 chr3L 14444674 14444745 chr3L 14444899 14444970 14 219 5.5 5.5 5.5 2.2 296 chr3L 14444674 intron bbg - chr3L 14444822 intron bbg - chr3L 14444970 intron bbg - chr3L_14_14440001 chr3L_14440001 RAL-774_125 1615 chr3L 14462877 14462906 chr3L 14463015 14463044 10 137 2.5 4.5 3.5 2.2 167 chr3L 14462877 intron bbg - chr3L 14462960 intron bbg - chr3L 14463044 intron bbg - chr3L_10_14460001 chr3L_14460001 RAL-774_125 1616 chr3L 14468431 14468458 chr3L 14473681 14473714 copia 5 5255 0.0 4.5 2.2 1.6 5283 chr3L 14468431 intron bbg - chr3L 14471072 intron bbg - chr3L 14473714 intron bbg - chr3L_5_14470001 chr3L_14470001 RAL-774_125 1617 chr3L 14502300 14502340 chr3L 14502490 14502494 5 182 3.0 3.0 3.0 1.2 194 chr3L 14502300 intron bbg - chr3L 14502397 intron bbg - chr3L 14502494 intron bbg - chr3L_5_14500001 chr3L_14500001 RAL-774_125 1618 chr3L 14534711 14534749 chr3L 14534838 14534862 12 125 1.5 0.0 0.8 6.7 151 chr3L 14534711 intron bbg - chr3L 14534786 intron bbg - chr3L 14534862 intron bbg - chr3L_12_14530001 chr3L_14530001 RAL-774_125 1619 chr3L 14546572 14546812 chr3L 14546698 14546942 13 129 1.0 1.0 1.0 6.5 370 chr3L 14546572 intron CG9238 - chr3L 14546757 intron CG9238 - chr3L 14546942 intron CG9238 - chr3L_13_14545001 chr3L_14545001 RAL-774_125 1620 chr3L 14566018 14566038 chr3L 14566183 14566198 5 164 1.0 8.5 4.8 0.9 180 chr3L 14566018 intergenic not near genes chr3L 14566108 intergenic not near genes chr3L 14566198 intergenic not near genes chr3L_5_14565001 chr3L_14565001 RAL-774_125 1621 chr3L 14635661 14635726 chr3L 14635790 14635850 16 123 1.5 3.0 2.2 5.0 189 chr3L 14635661 intron dlp + chr3L 14635756 intron dlp + chr3L 14635850 intron dlp + chr3L_16_14635001 chr3L_14635001 RAL-774_125 1622 chr3L 14652599 14652664 chr3L 14652728 14652776 14 123 3.5 3.5 3.5 3.1 177 chr3L 14652599 intron dlp + chr3L 14652688 intron dlp + chr3L 14652776 intron dlp + chr3L_14_14650001 chr3L_14650001 RAL-774_125 1623 chr3L 14721143 14721207 chr3L 14723031 14723040 Rt1c 13 1875 2.0 4.5 3.2 3.1 1897 chr3L 14721143 intron ome + chr3L 14722092 intron ome + chr3L 14723040 intron ome + chr3L_13_14720001 chr3L_14720001 RAL-774_125 1624 chr3L 14725556 14725610 chr3L 14728600 14728654 Doc 4 3044 2.5 6.5 4.5 0.7 3098 chr3L 14725556 intron ome + chr3L 14727105 intron ome + chr3L 14728654 intron ome + chr3L_4_14725001 chr3L_14725001 RAL-774_125 1625 chr3L 14741103 14741167 chr3L 14741226 14741295 16 125 3.5 5.0 4.2 3.1 192 chr3L 14741103 intron ome + chr3L 14741199 intron ome + chr3L 14741295 intron ome + chr3L_16_14740001 chr3L_14740001 RAL-774_125 1626 chr3L 14789793 14789850 chr3L 14789921 14789964 11 126 2.5 5.0 3.8 2.3 171 chr3L 14789793 intergenic Tdrd3 +,CG9425 + chr3L 14789878 intergenic CG9425 +,Tdrd3 + chr3L 14789964 5` UTR CG9425 + chr3L_11_14785001 chr3L_14785001 RAL-774_125 1627 chr3L 14885875 14885926 chr3L 14886004 14886067 18 137 2.0 4.5 3.2 4.3 192 chr3L 14885875 5` UTR CR44702 + chr3L 14885971 5` UTR CR44702 + chr3L 14886067 5` UTR CR44702 + chr3L_18_14885001 chr3L_14885001 RAL-774_125 1628 chr3L 14959945 14960015 chr3L 14960079 14960149 10 132 4.5 5.5 5.0 1.7 204 chr3L 14959945 intergenic not near genes chr3L 14960047 intergenic not near genes chr3L 14960149 intergenic not near genes chr3L_10_14960001 chr3L_14960001 RAL-774_125 1629 chr3L 14973599 14973642 chr3L 14973729 14973757 7 128 6.0 3.5 4.8 1.2 158 chr3L 14973599 intergenic Brd + chr3L 14973678 intergenic Brd + chr3L 14973757 intergenic not near genes chr3L_7_14970001 chr3L_14970001 RAL-774_125 1630 chr3L 15048124 15048185 chr3L 15048438 15048502 9 314 19.5 24.0 21.8 0.4 378 chr3L 15048124 intron Sytbeta - chr3L 15048313 intron Sytbeta - chr3L 15048502 intron Sytbeta - chr3L_9_15045001 chr3L_15045001 RAL-774_125 1631 chr3L 15053375 15053439 chr3L 15053757 15053823 10 386 3.5 3.5 3.5 2.2 448 chr3L 15053375 intron Sytbeta - chr3L 15053599 intron,3` UTR Sytbeta -,CG18649 - chr3L 15053823 intron,3` UTR Sytbeta -,CG18649 - chr3L_10_15050001 chr3L_15050001 RAL-774_125 1632 chr3L 15070070 15070118 chr3L 15070327 15070392 7 263 19.0 21.5 20.2 0.3 322 chr3L 15070070 exon cp309 - chr3L 15070231 exon cp309 - chr3L 15070392 exon cp309 - chr3L_7_15070001 chr3L_15070001 RAL-774_125 1633 chr3L 15085005 15085082 chr3L 15086221 15086263 1360 15 1209 3.5 6.0 4.8 2.6 1258 chr3L 15085005 intron cp309 - chr3L 15085634 intron cp309 - chr3L 15086263 intron cp309 - chr3L_15_15085001 chr3L_15085001 RAL-774_125 1634 chr3L 15094927 15094948 chr3L 15095071 15095094 5 146 3.0 4.0 3.5 1.1 167 chr3L 15094927 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095010 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095094 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_5_15095001 chr3L_15095001 RAL-774_125 1635 chr3L 15100395 15100435 chr3L 15100539 15100572 4 136 9.0 4.0 6.5 0.5 177 chr3L 15100395 intron,3` UTR CTPsyn +,CR43972 - chr3L 15100484 intron,3` UTR CTPsyn +,CR43972 - chr3L 15100572 intron,3` UTR CTPsyn +,CR43972 - chr3L_4_15100001 chr3L_15100001 RAL-774_125 1636 chr3L 15164974 15165034 chr3L 15165122 15165183 7 147 0.5 1.5 1.0 3.5 209 chr3L 15164974 intergenic not near genes chr3L 15165078 intergenic not near genes chr3L 15165183 intergenic not near genes chr3L_7_15165001 chr3L_15165001 RAL-774_125 1637 chr3L 15209026 15209089 chr3L 15209162 15209225 5 136 1.0 1.5 1.2 2.3 199 chr3L 15209026 intergenic CG6888 + chr3L 15209126 intergenic not near genes chr3L 15209225 intergenic not near genes chr3L_5_15205001 chr3L_15205001 RAL-774_125 1638 chr3L 15219696 15219765 chr3L 15219828 15219897 7 131 5.0 3.5 4.2 1.3 201 chr3L 15219696 intergenic not near genes chr3L 15219796 intergenic not near genes chr3L 15219897 intergenic not near genes chr3L_7_15215001 chr3L_15215001 RAL-774_125 1639 chr3L 15261840 15261914 chr3L 15261989 15262035 12 143 1.0 1.5 1.2 5.5 195 chr3L 15261840 intergenic not near genes chr3L 15261938 intergenic not near genes chr3L 15262035 intergenic not near genes chr3L_12_15260001 chr3L_15260001 RAL-774_125 1640 chr3L 15273133 15273188 chr3L 15273399 15273447 12 258 2.0 2.5 2.2 3.8 314 chr3L 15273133 intergenic not near genes chr3L 15273290 intergenic not near genes chr3L 15273447 intergenic not near genes chr3L_12_15270001 chr3L_15270001 RAL-774_125 1641 chr3L 15290458 15290508 chr3L 15290570 15290629 9 116 1.5 5.5 3.5 2.0 171 chr3L 15290458 intergenic not near genes chr3L 15290544 intergenic not near genes chr3L 15290629 intergenic not near genes chr3L_9_15290001 chr3L_15290001 RAL-774_125 1642 chr3L 15295727 15295756 chr3L 15298620 15298649 gypsy5 6 2892 7.5 4.5 6.0 0.9 2922 chr3L 15295727 intergenic not near genes chr3L 15297188 intergenic not near genes chr3L 15298649 intergenic Best4 + chr3L_6_15295001 chr3L_15295001 RAL-774_125 1643 chr3L 15333130 15333167 chr3L 15333241 15333289 4 116 2.0 7.5 4.8 0.7 159 chr3L 15333130 intergenic CR43247 + chr3L 15333210 intergenic CR43247 + chr3L 15333289 intergenic CR43247 + chr3L_4_15330001 chr3L_15330001 RAL-774_125 1644 chr3L 15384914 15384973 chr3L 15385092 15385149 15 168 5.0 3.5 4.2 2.9 235 chr3L 15384914 intergenic not near genes chr3L 15385032 intergenic not near genes chr3L 15385149 intergenic not near genes chr3L_15_15385001 chr3L_15385001 RAL-774_125 1645 chr3L 15405977 15406020 chr3L 15406108 15406145 4 129 3.5 4.5 4.0 0.8 168 chr3L 15405977 intergenic not near genes chr3L 15406061 intergenic not near genes chr3L 15406145 intergenic not near genes chr3L_4_15405001 chr3L_15405001 RAL-774_125 1646 chr3L 15418003 15418063 chr3L 15418123 15418182 11 125 5.5 5.5 5.5 1.7 179 chr3L 15418003 intergenic not near genes chr3L 15418092 intergenic not near genes chr3L 15418182 intergenic not near genes chr3L_11_15415001 chr3L_15415001 RAL-774_125 1647 chr3L 15423734 15423774 chr3L 15426628 15426668 opus 7 2893 2.5 1.5 2.0 2.3 2934 chr3L 15423734 intergenic not near genes chr3L 15425201 intergenic not near genes chr3L 15426668 intergenic not near genes chr3L_7_15425001 chr3L_15425001 RAL-774_125 1648 chr3L 15444605 15444660 chr3L 15444749 15444804 14 140 1.5 2.5 2.0 4.7 199 chr3L 15444605 intergenic not near genes chr3L 15444704 intergenic not near genes chr3L 15444804 intergenic not near genes chr3L_14_15440001 chr3L_15440001 RAL-774_125 1649 chr3L 15465993 15466125 chr3L 15466120 15466271 9 145 0.0 0.0 0.0 9.0 278 chr3L 15465993 intergenic not near genes chr3L 15466132 intergenic not near genes chr3L 15466271 intergenic not near genes chr3L_9_15465001 chr3L_15465001 RAL-774_125 1650 chr3L 15482558 15482622 chr3L 15482689 15482753 17 130 6.5 3.5 5.0 2.8 195 chr3L 15482558 intergenic not near genes chr3L 15482656 intergenic not near genes chr3L 15482753 intergenic not near genes chr3L_17_15480001 chr3L_15480001 RAL-774_125 1651 chr3L 15493264 15493332 chr3L 15493409 15493477 7 143 5.5 0.0 2.8 1.8 213 chr3L 15493264 exon CG12355 - chr3L 15493370 intron CG12355 - chr3L 15493477 5` UTR CG12355 - chr3L_7_15490001 chr3L_15490001 RAL-774_125 1652 chr3L 15600119 15600196 chr3L 15600253 15600347 12 149 5.5 0.0 2.8 3.2 228 chr3L 15600119 intron RhoGAP71E + chr3L 15600233 intron RhoGAP71E + chr3L 15600347 intron RhoGAP71E + chr3L_12_15600001 chr3L_15600001 RAL-774_125 1653 chr3L 15615907 15615938 chr3L 15616052 15616058 6 142 8.5 6.0 7.2 0.7 151 chr3L 15615907 intron comm3 - chr3L 15615982 intron comm3 - chr3L 15616058 intron comm3 - chr3L_6_15615001 chr3L_15615001 RAL-774_125 1654 chr3L 15641736 15641811 chr3L 15641871 15641946 5 134 0.0 2.5 1.2 2.3 210 chr3L 15641736 intron comm3 - chr3L 15641841 intron comm3 - chr3L 15641946 intron comm3 - chr3L_5_15640001 chr3L_15640001 RAL-774_125 1655 chr3L 15691379 15691437 chr3L 15691501 15691569 7 120 1.5 1.0 1.2 3.2 190 chr3L 15691379 intron CG34451 - chr3L 15691474 intron CG34451 - chr3L 15691569 intron CG34451 - chr3L_7_15690001 chr3L_15690001 RAL-774_125 1656 chr3L 15742913 15742947 chr3L 15743124 15743147 5 203 10.5 0.0 5.2 0.8 234 chr3L 15742913 intergenic not near genes chr3L 15743030 intergenic not near genes chr3L 15743147 intergenic not near genes chr3L_5_15740001 chr3L_15740001 RAL-774_125 1657 chr3L 15778542 15778592 chr3L 15778674 15778724 7 130 1.5 3.0 2.2 2.2 182 chr3L 15778542 intergenic not near genes chr3L 15778633 intergenic not near genes chr3L 15778724 intergenic not near genes chr3L_7_15775001 chr3L_15775001 RAL-774_125 1658 chr3L 15836199 15836273 chr3L 15836335 15836348 17 126 4.0 7.5 5.8 2.5 149 chr3L 15836199 exon CG15715 - chr3L 15836274 intron CG15715 - chr3L 15836348 intron CG15715 - chr3L_17_15835001 chr3L_15835001 RAL-774_125 1659 chr3L 15840389 15840464 chr3L 15840522 15840568 8 129 2.0 1.0 1.5 3.2 179 chr3L 15840389 intron CG32150 - chr3L 15840478 intron CG32150 - chr3L 15840568 intron CG32150 - chr3L_8_15840001 chr3L_15840001 RAL-774_125 1660 chr3L 15883146 15883216 chr3L 15883489 15883550 18 336 4.5 3.0 3.8 3.8 404 chr3L 15883146 intron pHCl - chr3L 15883348 intron pHCl - chr3L 15883550 intron pHCl - chr3L_18_15880001 chr3L_15880001 RAL-774_125 1661 chr3L 15899216 15899246 chr3L 15899791 15899858 jockey 5 594 4.0 2.0 3.0 1.2 642 chr3L 15899216 intergenic pHCl - chr3L 15899537 intergenic not near genes chr3L 15899858 intergenic sff - chr3L_5_15895001 chr3L_15895001 RAL-774_125 1662 chr3L 15920738 15920789 chr3L 15920880 15920936 11 145 3.5 5.5 4.5 2.0 198 chr3L 15920738 intron sff - chr3L 15920837 intron sff - chr3L 15920936 intron sff - chr3L_11_15920001 chr3L_15920001 RAL-774_125 1663 chr3L 15929148 15929159 chr3L 15938341 15938341 roo 4 9190 8.0 5.5 6.8 0.5 9193 chr3L 15929148 intron Pka-C3 - chr3L 15933744 intron Pka-C3 - chr3L 15938341 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 RAL-774_125 1664 chr3L 15989187 15989224 chr3L 15989319 15989357 7 133 6.0 4.0 5.0 1.2 170 chr3L 15989187 exon Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989357 intron Hip14 + chr3L_7_15985001 chr3L_15985001 RAL-774_125 1665 chr3L 16070691 16070746 chr3L 16070818 16070855 5 123 6.5 7.0 6.8 0.6 164 chr3L 16070691 intron Mbs + chr3L 16070773 intron Mbs + chr3L 16070855 exon Mbs + chr3L_5_16070001 chr3L_16070001 RAL-774_125 1666 chr3L 16102230 16102293 chr3L 16102365 16102424 11 130 7.5 3.0 5.2 1.8 194 chr3L 16102230 exon CG5414 + chr3L 16102327 intron CG5414 + chr3L 16102424 exon CG5414 + chr3L_11_16100001 chr3L_16100001 RAL-774_125 1667 chr3L 16162589 16162610 chr3L 16162682 16162744 4 122 2.5 2.0 2.2 1.2 155 chr3L 16162589 intron CG5151 - chr3L 16162666 intron CG5151 - chr3L 16162744 intron CG5151 - chr3L_4_16160001 chr3L_16160001 RAL-774_125 1668 chr3L 16179238 16179245 chr3L 16179330 16179377 6 123 1.0 1.5 1.2 2.7 139 chr3L 16179238 intergenic not near genes chr3L 16179308 intergenic not near genes chr3L 16179377 intergenic not near genes chr3L_6_16175001 chr3L_16175001 RAL-774_125 1669 chr3L 16184054 16184112 chr3L 16188948 16188998 X-element 18 4891 3.5 2.0 2.8 4.7 4944 chr3L 16184054 intergenic not near genes chr3L 16186526 intergenic not near genes chr3L 16188998 intergenic not near genes chr3L_18_16185001 chr3L_16185001 RAL-774_125 1670 chr3L 16194317 16194355 chr3L 16194435 16194479 7 126 2.5 4.0 3.2 1.7 162 chr3L 16194317 intergenic not near genes chr3L 16194398 intergenic not near genes chr3L 16194479 intergenic not near genes chr3L_7_16190001 chr3L_16190001 RAL-774_125 1671 chr3L 16212766 16212809 chr3L 16212905 16212950 6 139 8.5 0.0 4.2 1.2 184 chr3L 16212766 intergenic CG13073 - chr3L 16212858 intergenic CG13073 - chr3L 16212950 intergenic CG13073 - chr3L_6_16210001 chr3L_16210001 RAL-774_125 1672 chr3L 16220100 16220167 chr3L 16220264 16220334 7 166 1.0 1.0 1.0 3.5 234 chr3L 16220100 intergenic not near genes chr3L 16220217 intergenic not near genes chr3L 16220334 intergenic not near genes chr3L_7_16220001 chr3L_16220001 RAL-774_125 1673 chr3L 16240711 16240779 chr3L 16240893 16240958 7 181 0.0 1.5 0.8 3.9 247 chr3L 16240711 intergenic not near genes chr3L 16240834 intergenic not near genes chr3L 16240958 intergenic not near genes chr3L_7_16240001 chr3L_16240001 RAL-774_125 1674 chr3L 16279038 16279090 chr3L 16279168 16279221 8 129 4.5 3.0 3.8 1.7 183 chr3L 16279038 exon CG13050 - chr3L 16279130 intron CG13050 - chr3L 16279221 5` UTR CG13050 - chr3L_8_16275001 chr3L_16275001 RAL-774_125 1675 chr3L 16322777 16322846 chr3L 16322917 16322986 11 139 3.0 3.0 3.0 2.8 209 chr3L 16322777 intergenic not near genes chr3L 16322882 intergenic not near genes chr3L 16322986 intergenic not near genes chr3L_11_16320001 chr3L_16320001 RAL-774_125 1676 chr3L 16387970 16388014 chr3L 16388070 16388132 10 111 6.0 2.5 4.2 1.9 162 chr3L 16387970 exon RAF2 + chr3L 16388051 exon RAF2 + chr3L 16388132 exon RAF2 + chr3L_10_16385001 chr3L_16385001 RAL-774_125 1677 chr3L 16435593 16435610 chr3L 16435704 16435746 7 128 4.0 3.0 3.5 1.6 153 chr3L 16435593 intron,intron CG33158 +,dsx-c73A - chr3L 16435670 intron,intron CG33158 +,dsx-c73A - chr3L 16435746 intron,intron CG33158 +,dsx-c73A - chr3L_7_16435001 chr3L_16435001 RAL-774_125 1678 chr3L 16443798 16443876 chr3L 16446188 16446266 Doc 11 2389 3.0 6.0 4.5 2.0 2468 chr3L 16443798 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446266 intron,intron CG33158 +,dsx-c73A - chr3L_11_16445001 chr3L_16445001 RAL-774_125 1679 chr3L 16450002 16450048 chr3L 16450131 16450183 6 134 2.5 5.5 4.0 1.2 181 chr3L 16450002 intron,intron CG33158 +,dsx-c73A - chr3L 16450092 intron,intron CG33158 +,dsx-c73A - chr3L 16450183 intron,exon CG33158 +,dsx-c73A - chr3L_6_16450001 chr3L_16450001 RAL-774_125 1680 chr3L 16457483 16457546 chr3L 16457629 16457686 5 143 4.0 2.0 3.0 1.2 203 chr3L 16457483 intron CG33158 + chr3L 16457584 intron CG33158 + chr3L 16457686 intron CG33158 + chr3L_5_16455001 chr3L_16455001 RAL-774_125 1681 chr3L 16493965 16493994 chr3L 16494532 16494560 jockey 5 564 2.5 3.5 3.0 1.2 595 chr3L 16493965 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494262 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494560 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_5_16490001 chr3L_16490001 RAL-774_125 1682 chr3L 16533530 16533586 chr3L 16533691 16533744 6 159 2.0 5.0 3.5 1.3 214 chr3L 16533530 intron CG43373 - chr3L 16533637 intron CG43373 - chr3L 16533744 intron CG43373 - chr3L_6_16530001 chr3L_16530001 RAL-774_125 1683 chr3L 16540008 16540072 chr3L 16540146 16540203 10 136 6.5 3.5 5.0 1.7 195 chr3L 16540008 intron CG43373 - chr3L 16540106 intron CG43373 - chr3L 16540203 intron CG43373 - chr3L_10_16540001 chr3L_16540001 RAL-774_125 1684 chr3L 16610653 16610706 chr3L 16610788 16610834 4 131 3.5 5.0 4.2 0.8 181 chr3L 16610653 intergenic Su(P) -,Prosbeta6 - chr3L 16610744 exon Su(P) - chr3L 16610834 intron Su(P) - chr3L_4_16610001 chr3L_16610001 RAL-774_125 1685 chr3L 16616476 16616540 chr3L 16621844 16621885 297 9 5370 4.0 5.5 4.8 1.6 5409 chr3L 16616476 3` UTR Abl - chr3L 16619180 3` UTR Abl - chr3L 16621885 3` UTR Abl - chr3L_9_16615001 chr3L_16615001 RAL-774_125 1686 chr3L 16632188 16632261 chr3L 16632414 16632505 8 232 4.0 0.5 2.2 2.5 317 chr3L 16632188 intron Abl - chr3L 16632346 intron Abl - chr3L 16632505 intron Abl - chr3L_8_16630001 chr3L_16630001 RAL-774_125 1687 chr3L 16659071 16659127 chr3L 16659188 16659255 18 124 5.5 4.0 4.8 3.1 184 chr3L 16659071 intron Baldspot - chr3L 16659163 intron Baldspot - chr3L 16659255 exon Baldspot - chr3L_18_16655001 chr3L_16655001 RAL-774_125 1688 chr3L 16683989 16684031 chr3L 16689270 16689312 copia 10 5279 2.0 5.0 3.5 2.2 5323 chr3L 16683989 intron,intron Lasp -,CG43954 - chr3L 16686650 intron,intron Lasp -,CG43954 - chr3L 16689312 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_10_16685001 chr3L_16685001 RAL-774_125 1689 chr3L 16691558 16691617 chr3L 16691711 16691736 10 149 0.5 9.0 4.8 1.7 178 chr3L 16691558 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16691647 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16691736 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_10_16690001 chr3L_16690001 RAL-774_125 1690 chr3L 16699976 16700011 chr3L 16700121 16700139 5 140 7.5 1.0 4.2 1.0 163 chr3L 16699976 intron,intron Lasp -,CG43954 - chr3L 16700058 intron,intron Lasp -,CG43954 - chr3L 16700139 intron,intron Lasp -,CG43954 - chr3L_5_16700001 chr3L_16700001 RAL-774_125 1691 chr3L 16772453 16772507 chr3L 16772588 16772647 9 138 6.5 3.0 4.8 1.6 194 chr3L 16772453 intron Nrt + chr3L 16772550 intron Nrt + chr3L 16772647 intron Nrt + chr3L_9_16770001 chr3L_16770001 RAL-774_125 1692 chr3L 16817831 16817901 chr3L 16818021 16818069 14 184 2.5 3.5 3.0 3.5 238 chr3L 16817831 intron,intron nudC +,CG13024 - chr3L 16817950 intron,intron nudC +,CG13024 - chr3L 16818069 intron,intron nudC +,CG13024 - chr3L_14_16815001 chr3L_16815001 RAL-774_125 1693 chr3L 16844976 16845044 chr3L 16845139 16845199 13 161 3.0 5.0 4.0 2.6 223 chr3L 16844976 5` UTR CG9669 - chr3L 16845088 intergenic CG9669 -,CG9715 + chr3L 16845199 intergenic CG9715 +,CG9669 - chr3L_13_16845001 chr3L_16845001 RAL-774_125 1694 chr3L 16869558 16869600 chr3L 16869676 16869733 7 129 6.0 6.0 6.0 1.0 175 chr3L 16869558 intron Lmpt + chr3L 16869646 intron Lmpt + chr3L 16869733 intron Lmpt + chr3L_7_16865001 chr3L_16865001 RAL-774_125 1695 chr3L 16945693 16945729 chr3L 16954893 16954893 roo 12 9190 6.5 4.5 5.5 1.8 9200 chr3L 16945693 exon Obp73a + chr3L 16950293 intergenic not near genes chr3L 16954893 5` UTR Nc73EF + chr3L_12_16950001 chr3L_16950001 RAL-774_125 1696 chr3L 16969391 16969441 chr3L 16969661 16969716 12 274 2.0 4.0 3.0 3.0 325 chr3L 16969391 intergenic not near genes chr3L 16969554 intergenic Exn + chr3L 16969716 intergenic Exn + chr3L_12_16965001 chr3L_16965001 RAL-774_125 1697 chr3L 16979982 16980040 chr3L 16980234 16980292 10 252 5.5 4.0 4.8 1.7 310 chr3L 16979982 intron Exn + chr3L 16980137 intron Exn + chr3L 16980292 intron Exn + chr3L_10_16980001 chr3L_16980001 RAL-774_125 1698 chr3L 17026752 17026816 chr3L 17026877 17026942 17 124 9.5 3.5 6.5 2.3 190 chr3L 17026752 exon Fit2 + chr3L 17026847 3` UTR Fit2 + chr3L 17026942 3` UTR Fit2 + chr3L_17_17025001 chr3L_17025001 RAL-774_125 1699 chr3L 17027130 17027189 chr3L 17027272 17027331 9 139 4.0 2.5 3.2 2.1 201 chr3L 17027130 intergenic Fit2 +,CG7730 + chr3L 17027230 intergenic Fit2 +,CG7730 + chr3L 17027331 intergenic CG7730 +,Fit2 + chr3L_9_17025001 chr3L_17025001 RAL-774_125 1700 chr3L 17034889 17034953 chr3L 17035122 17035191 G2 9 235 3.0 4.0 3.5 2.0 302 chr3L 17034889 intergenic not near genes chr3L 17035040 intergenic not near genes chr3L 17035191 intergenic beg + chr3L_9_17035001 chr3L_17035001 RAL-774_125 1701 chr3L 17117066 17117121 chr3L 17117198 17117256 12 126 3.0 3.0 3.0 3.0 190 chr3L 17117066 intron Rbp6 - chr3L 17117161 intron Rbp6 - chr3L 17117256 intron Rbp6 - chr3L_12_17115001 chr3L_17115001 RAL-774_125 1702 chr3L 17222421 17222469 chr3L 17222644 17222696 6 223 6.5 1.0 3.8 1.2 275 chr3L 17222421 intron Rbp6 - chr3L 17222558 intron Rbp6 - chr3L 17222696 intron Rbp6 - chr3L_6_17220001 chr3L_17220001 RAL-774_125 1703 chr3L 17296893 17296971 chr3L 17297052 17297131 9 157 2.5 3.5 3.0 2.2 238 chr3L 17296893 intergenic not near genes chr3L 17297012 intergenic not near genes chr3L 17297131 intergenic not near genes chr3L_9_17295001 chr3L_17295001 RAL-774_125 1704 chr3L 17408871 17408926 chr3L 17408992 17409047 10 124 6.5 3.0 4.8 1.7 176 chr3L 17408871 intron blot - chr3L 17408959 intron blot - chr3L 17409047 intron blot - chr3L_10_17405001 chr3L_17405001 RAL-774_125 1705 chr3L 17461970 17461995 chr3L 17462165 17462190 4 194 5.0 3.5 4.2 0.8 220 chr3L 17461970 intergenic not near genes chr3L 17462080 intergenic not near genes chr3L 17462190 intergenic not near genes chr3L_4_17460001 chr3L_17460001 RAL-774_125 1706 chr3L 17510701 17510755 chr3L 17510830 17510889 15 128 5.0 7.5 6.2 2.1 188 chr3L 17510701 exon Oatp74D + chr3L 17510795 intron Oatp74D + chr3L 17510889 intron Oatp74D + chr3L_15_17510001 chr3L_17510001 RAL-774_125 1707 chr3L 17516939 17517003 chr3L 17524547 17524596 412 12 7603 2.5 6.5 4.5 2.2 7657 chr3L 17516939 intron CG7564 + chr3L 17520768 intron CG7564 + chr3L 17524596 3` UTR CG7564 + chr3L_12_17520001 chr3L_17520001 RAL-774_125 1708 chr3L 17580536 17580589 chr3L 17580762 17580784 10 219 12.0 0.0 6.0 1.4 248 chr3L 17580536 intron Eip74EF - chr3L 17580660 intron Eip74EF - chr3L 17580784 intron Eip74EF - chr3L_10_17580001 chr3L_17580001 RAL-774_125 1709 chr3L 17592774 17592811 chr3L 17592900 17592949 7 137 0.0 6.0 3.0 1.8 175 chr3L 17592774 intron Eip74EF - chr3L 17592862 intron Eip74EF - chr3L 17592949 intron Eip74EF - chr3L_7_17590001 chr3L_17590001 RAL-774_125 1710 chr3L 17646813 17646845 chr3L 17646935 17646972 6 126 5.0 1.0 3.0 1.5 159 chr3L 17646813 intergenic CG43085 - chr3L 17646892 intergenic CG43085 - chr3L 17646972 intergenic CG43085 -,Ndfip - chr3L_6_17645001 chr3L_17645001 RAL-774_125 1711 chr3L 17701141 17701174 chr3L 17701265 17701305 6 125 6.0 4.5 5.2 1.0 164 chr3L 17701141 intron Ccn + chr3L 17701223 intron Ccn + chr3L 17701305 intron Ccn + chr3L_6_17700001 chr3L_17700001 RAL-774_125 1712 chr3L 17730807 17730868 chr3L 17738187 17738248 mdg1 9 7380 5.5 4.0 4.8 1.6 7441 chr3L 17730807 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738248 intron Ccn + chr3L_9_17730001 chr3L_17730001 RAL-774_125 1713 chr3L 17753302 17753358 chr3L 17753438 17753494 10 134 5.0 5.0 5.0 1.7 192 chr3L 17753302 exon Adgf-A - chr3L 17753398 intron Adgf-A - chr3L 17753494 exon Adgf-A - chr3L_10_17750001 chr3L_17750001 RAL-774_125 1714 chr3L 17789809 17789869 chr3L 17789928 17789978 9 122 2.5 3.0 2.8 2.4 169 chr3L 17789809 intergenic not near genes chr3L 17789894 intergenic not near genes chr3L 17789978 intergenic not near genes chr3L_9_17785001 chr3L_17785001 RAL-774_125 1715 chr3L 17790578 17790622 chr3L 17790868 17790937 10 308 2.5 1.0 1.8 3.6 359 chr3L 17790578 intergenic CG42815 - chr3L 17790758 intergenic CG42815 - chr3L 17790937 intergenic CG42815 - chr3L_10_17790001 chr3L_17790001 RAL-774_125 1716 chr3L 17791896 17791916 chr3L 17792023 17792035 8 126 4.0 2.0 3.0 2.0 139 chr3L 17791896 intergenic CG42816 -,CG42815 - chr3L 17791966 intergenic CG42816 -,CG42815 - chr3L 17792035 intergenic CG42816 - chr3L_8_17790001 chr3L_17790001 RAL-774_125 1717 chr3L 17799784 17799835 chr3L 17801616 17801672 S-element 7 1836 2.5 3.0 2.8 1.8 1888 chr3L 17799784 intron NUCB1 - chr3L 17800728 intron NUCB1 - chr3L 17801672 intron NUCB1 - chr3L_7_17800001 chr3L_17800001 RAL-774_125 1718 chr3L 17884662 17884702 chr3L 17884807 17884851 4 147 2.0 0.5 1.2 1.8 189 chr3L 17884662 intergenic CG5506 - chr3L 17884756 intergenic CG5506 - chr3L 17884851 intergenic CG5506 - chr3L_4_17880001 chr3L_17880001 RAL-774_125 1719 chr3L 17918335 17918352 chr3L 17921183 17921205 opus 4 2852 8.5 3.5 6.0 0.6 2870 chr3L 17918335 intergenic not near genes chr3L 17919770 intergenic not near genes chr3L 17921205 intergenic not near genes chr3L_4_17915001 chr3L_17915001 RAL-774_125 1720 chr3L 17939042 17939071 chr3L 17939185 17939221 6 149 6.0 5.5 5.8 0.9 179 chr3L 17939042 intron CG43174 + chr3L 17939132 intron CG43174 + chr3L 17939221 intron CG43174 + chr3L_6_17935001 chr3L_17935001 RAL-774_125 1721 chr3L 17991535 17991580 chr3L 17991663 17991708 5 128 6.5 6.0 6.2 0.7 173 chr3L 17991535 intron Eip75B - chr3L 17991622 intron Eip75B - chr3L 17991708 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-774_125 1722 chr3L 18047683 18047727 chr3L 18056783 18056834 roo 6 9104 1.5 5.5 3.5 1.3 9151 chr3L 18047683 intron Eip75B - chr3L 18052258 intron Eip75B - chr3L 18056834 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RAL-774_125 1723 chr3L 18092133 18092144 chr3L 18092265 18092276 4 131 0.0 5.0 2.5 1.1 143 chr3L 18092133 intron CG13698 - chr3L 18092204 intron CG13698 - chr3L 18092276 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-774_125 1724 chr3L 18118174 18118235 chr3L 18118302 18118363 13 126 3.0 1.0 2.0 4.3 189 chr3L 18118174 3` UTR,intron CG32195 +,CG7341 + chr3L 18118268 3` UTR,intron CG32195 +,CG7341 + chr3L 18118363 3` UTR,intron CG32195 +,CG7341 + chr3L_13_18115001 chr3L_18115001 RAL-774_125 1725 chr3L 18124381 18124427 chr3L 18124510 18124561 7 133 2.5 4.5 3.5 1.6 180 chr3L 18124381 intergenic not near genes chr3L 18124471 intergenic not near genes chr3L 18124561 intergenic not near genes chr3L_7_18120001 chr3L_18120001 RAL-774_125 1726 chr3L 18150272 18150329 chr3L 18150416 18150470 15 146 4.5 1.5 3.0 3.8 198 chr3L 18150272 intron CG7330 + chr3L 18150371 intron CG7330 + chr3L 18150470 intron CG7330 + chr3L_15_18150001 chr3L_18150001 RAL-774_125 1727 chr3L 18172643 18172698 chr3L 18172769 18172824 11 126 5.5 1.5 3.5 2.4 181 chr3L 18172643 intron W - chr3L 18172734 intron W - chr3L 18172824 intron W - chr3L_11_18170001 chr3L_18170001 RAL-774_125 1728 chr3L 18189557 18189585 chr3L 18190198 18190218 S-element 6 642 4.5 3.5 4.0 1.2 661 chr3L 18189557 intergenic not near genes chr3L 18189888 intergenic not near genes chr3L 18190218 intergenic not near genes chr3L_6_18185001 chr3L_18185001 RAL-774_125 1729 chr3L 18198930 18198931 chr3L 24821493 24821494 4 6622563 2.0 10.5 6.2 0.6 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-774_125 1730 chr3L 18203549 18203604 chr3L 18203694 18203737 4 136 2.5 0.0 1.2 1.8 188 chr3L 18203549 exon CG7320 + chr3L 18203643 intergenic CG7320 + chr3L 18203737 intergenic CG7320 + chr3L_4_18200001 chr3L_18200001 RAL-774_125 1731 chr3L 18207865 18207889 chr3L 18208000 18208024 4 135 5.0 1.0 3.0 1.0 159 chr3L 18207865 intergenic not near genes chr3L 18207944 intergenic not near genes chr3L 18208024 intergenic not near genes chr3L_4_18205001 chr3L_18205001 RAL-774_125 1732 chr3L 18208598 18208613 chr3L 18208709 18208749 4 123 0.0 1.0 0.5 2.7 151 chr3L 18208598 intergenic not near genes chr3L 18208674 intergenic not near genes chr3L 18208749 intergenic not near genes chr3L_4_18205001 chr3L_18205001 RAL-774_125 1733 chr3L 18210717 18210746 chr3L 18210847 18210880 12 131 3.0 1.0 2.0 4.0 163 chr3L 18210717 intergenic not near genes chr3L 18210798 intergenic not near genes chr3L 18210880 intergenic not near genes chr3L_12_18210001 chr3L_18210001 RAL-774_125 1734 chr3L 18223118 18223182 chr3L 18223254 18223326 5 142 1.0 0.0 0.5 3.3 208 chr3L 18223118 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223326 intergenic not near genes chr3L_5_18220001 chr3L_18220001 RAL-774_125 1735 chr3L 18253650 18253700 chr3L 18253909 18253960 6 259 2.0 4.0 3.0 1.5 310 chr3L 18253650 intergenic not near genes chr3L 18253805 intergenic not near genes chr3L 18253960 intergenic not near genes chr3L_6_18250001 chr3L_18250001 RAL-774_125 1736 chr3L 18262431 18262479 chr3L 18262564 18262607 11 132 5.0 3.0 4.0 2.2 176 chr3L 18262431 intergenic not near genes chr3L 18262519 intergenic not near genes chr3L 18262607 intergenic not near genes chr3L_11_18260001 chr3L_18260001 RAL-774_125 1737 chr3L 18301309 18301371 chr3L 18301442 18301510 5 133 0.0 0.5 0.2 4.2 201 chr3L 18301309 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301510 intergenic CG13700 - chr3L_5_18300001 chr3L_18300001 RAL-774_125 1738 chr3L 18376043 18376095 chr3L 18376176 18376229 6 137 2.0 1.0 1.5 2.4 186 chr3L 18376043 intergenic not near genes chr3L 18376136 intergenic not near genes chr3L 18376229 intergenic not near genes chr3L_6_18375001 chr3L_18375001 RAL-774_125 1739 chr3L 18406098 18406148 chr3L 18406224 18406274 6 122 2.0 3.0 2.5 1.7 176 chr3L 18406098 intergenic not near genes chr3L 18406186 intergenic not near genes chr3L 18406274 intergenic not near genes chr3L_6_18405001 chr3L_18405001 RAL-774_125 1740 chr3L 18408689 18408748 chr3L 18408825 18408884 13 135 5.5 5.0 5.2 2.1 195 chr3L 18408689 intergenic not near genes chr3L 18408786 intergenic not near genes chr3L 18408884 intergenic not near genes chr3L_13_18405001 chr3L_18405001 RAL-774_125 1741 chr3L 18437232 18437281 chr3L 18437380 18437429 7 148 3.0 3.0 3.0 1.8 197 chr3L 18437232 intergenic not near genes chr3L 18437330 intergenic not near genes chr3L 18437429 intergenic not near genes chr3L_7_18435001 chr3L_18435001 RAL-774_125 1742 chr3L 18448571 18448614 chr3L 18448713 18448755 7 142 5.0 3.0 4.0 1.4 184 chr3L 18448571 intergenic not near genes chr3L 18448663 intergenic not near genes chr3L 18448755 intergenic not near genes chr3L_7_18445001 chr3L_18445001 RAL-774_125 1743 chr3L 18456232 18456303 chr3L 18456367 18456438 10 130 5.0 5.5 5.2 1.6 206 chr3L 18456232 intergenic CR44670 - chr3L 18456335 intergenic CR44670 - chr3L 18456438 3` UTR CR44670 - chr3L_10_18455001 chr3L_18455001 RAL-774_125 1744 chr3L 18464450 18464514 chr3L 18464574 18464629 15 125 4.0 3.0 3.5 3.3 179 chr3L 18464450 intergenic not near genes chr3L 18464540 intergenic not near genes chr3L 18464629 intergenic not near genes chr3L_15_18460001 chr3L_18460001 RAL-774_125 1745 chr3L 18479061 18479094 chr3L 18479190 18479241 7 137 0.5 5.5 3.0 1.8 180 chr3L 18479061 5` UTR CR44673 + chr3L 18479151 5` UTR CR44673 + chr3L 18479241 intergenic CR44673 + chr3L_7_18475001 chr3L_18475001 RAL-774_125 1746 chr3L 18506096 18506143 chr3L 18509609 18509656 F-element 5 3513 7.0 3.0 5.0 0.8 3560 chr3L 18506096 intergenic not near genes chr3L 18507876 intergenic not near genes chr3L 18509656 intergenic not near genes chr3L_5_18505001 chr3L_18505001 RAL-774_125 1747 chr3L 18514872 18514919 chr3L 18520113 18520155 BS 14 5240 7.0 5.0 6.0 2.0 5283 chr3L 18514872 intergenic not near genes chr3L 18517514 intergenic not near genes chr3L 18520155 intergenic not near genes chr3L_14_18515001 chr3L_18515001 RAL-774_125 1748 chr3L 18528590 18528649 chr3L 18537796 18537860 roo 11 9210 4.5 3.5 4.0 2.2 9270 chr3L 18528590 intergenic not near genes chr3L 18533225 intergenic not near genes chr3L 18537860 intergenic not near genes chr3L_11_18530001 chr3L_18530001 RAL-774_125 1749 chr3L 18546242 18546304 chr3L 18546371 18546399 14 125 4.0 3.5 3.8 2.9 157 chr3L 18546242 intergenic not near genes chr3L 18546320 intergenic not near genes chr3L 18546399 intergenic not near genes chr3L_14_18545001 chr3L_18545001 RAL-774_125 1750 chr3L 18548906 18548979 chr3L 18549034 18549108 5 128 3.0 1.0 2.0 1.7 202 chr3L 18548906 intergenic not near genes chr3L 18549007 intergenic not near genes chr3L 18549108 intergenic not near genes chr3L_5_18545001 chr3L_18545001 RAL-774_125 1751 chr3L 18549786 18549828 chr3L 18549927 18549981 4 150 0.0 0.0 0.0 4.0 195 chr3L 18549786 intergenic not near genes chr3L 18549884 intergenic not near genes chr3L 18549981 intergenic not near genes chr3L_4_18545001 chr3L_18545001 RAL-774_125 1752 chr3L 18566984 18567044 chr3L 18567119 18567180 9 135 3.0 4.5 3.8 1.9 196 chr3L 18566984 intron AstC-R1 + chr3L 18567082 intron AstC-R1 + chr3L 18567180 intron AstC-R1 + chr3L_9_18565001 chr3L_18565001 RAL-774_125 1753 chr3L 18593904 18593973 chr3L 18595934 18596006 Doc 13 2029 3.5 1.0 2.2 4.1 2102 chr3L 18593904 intergenic term - chr3L 18594955 intergenic not near genes chr3L 18596006 intergenic CR45389 + chr3L_13_18590001 chr3L_18590001 RAL-774_125 1754 chr3L 18638536 18638595 chr3L 18638680 18638739 7 143 3.0 3.0 3.0 1.8 203 chr3L 18638536 intron MYPT-75D + chr3L 18638638 intron MYPT-75D + chr3L 18638739 intron MYPT-75D + chr3L_7_18635001 chr3L_18635001 RAL-774_125 1755 chr3L 18705375 18705430 chr3L 18705508 18705562 8 136 4.5 3.0 3.8 1.7 187 chr3L 18705375 intergenic not near genes chr3L 18705468 intergenic not near genes chr3L 18705562 intergenic not near genes chr3L_8_18705001 chr3L_18705001 RAL-774_125 1756 chr3L 18710723 18710778 chr3L 18718725 18718778 Stalker2 15 8000 3.5 4.0 3.8 3.1 8055 chr3L 18710723 intergenic not near genes chr3L 18714750 intergenic not near genes chr3L 18718778 intergenic not near genes chr3L_15_18710001 chr3L_18710001 RAL-774_125 1757 chr3L 18753507 18753547 chr3L 18753639 18753679 6 131 2.0 3.0 2.5 1.7 172 chr3L 18753507 intron ftz-f1 - chr3L 18753593 intron ftz-f1 - chr3L 18753679 intron ftz-f1 - chr3L_6_18750001 chr3L_18750001 RAL-774_125 1758 chr3L 18770609 18770666 chr3L 18770744 18770801 7 135 2.5 2.0 2.2 2.2 192 chr3L 18770609 intron ftz-f1 - chr3L 18770705 intron ftz-f1 - chr3L 18770801 intron ftz-f1 - chr3L_7_18770001 chr3L_18770001 RAL-774_125 1759 chr3L 18772373 18772426 chr3L 18781101 18781141 roo 16 8728 4.0 7.5 5.8 2.4 8768 chr3L 18772373 intron ftz-f1 - chr3L 18776757 intron ftz-f1 - chr3L 18781141 intron ftz-f1 - chr3L_16_18775001 chr3L_18775001 RAL-774_125 1760 chr3L 18792526 18792600 chr3L 18792658 18792732 13 132 2.0 4.0 3.0 3.2 206 chr3L 18792526 intron ftz-f1 - chr3L 18792629 intron ftz-f1 - chr3L 18792732 intron ftz-f1 - chr3L_13_18790001 chr3L_18790001 RAL-774_125 1761 chr3L 18810103 18810137 chr3L 18810230 18810258 7 124 10.5 9.5 10.0 0.6 155 chr3L 18810103 intron CG14073 - chr3L 18810180 intron CG14073 - chr3L 18810258 intron CG14073 - chr3L_7_18810001 chr3L_18810001 RAL-774_125 1762 chr3L 18810138 18810152 chr3L 18810229 18810279 4 118 9.5 9.5 9.5 0.4 141 chr3L 18810138 intron CG14073 - chr3L 18810208 intron CG14073 - chr3L 18810279 intron CG14073 - chr3L_4_18810001 chr3L_18810001 RAL-774_125 1763 chr3L 18832572 18832633 chr3L 18832700 18832761 9 125 4.5 8.5 6.5 1.2 189 chr3L 18832572 intron Indy - chr3L 18832666 intron Indy - chr3L 18832761 intron Indy - chr3L_9_18830001 chr3L_18830001 RAL-774_125 1764 chr3L 18833752 18833792 chr3L 18834961 18835006 1360 6 1213 5.5 6.0 5.8 0.9 1254 chr3L 18833752 intron Indy - chr3L 18834379 intron Indy - chr3L 18835006 intron Indy - chr3L_6_18830001 chr3L_18830001 RAL-774_125 1765 chr3L 18838474 18838539 chr3L 18838604 18838656 9 127 3.5 2.0 2.8 2.4 182 chr3L 18838474 intron Indy - chr3L 18838565 intron Indy - chr3L 18838656 intron Indy - chr3L_9_18835001 chr3L_18835001 RAL-774_125 1766 chr3L 18839692 18839765 chr3L 18839825 18839898 19 130 3.5 8.0 5.8 2.8 206 chr3L 18839692 intron Indy - chr3L 18839795 intron Indy - chr3L 18839898 intron Indy - chr3L_19_18835001 chr3L_18835001 RAL-774_125 1767 chr3L 18840843 18840893 chr3L 18841034 18841084 8 190 1.5 4.5 3.0 2.0 241 chr3L 18840843 intron Indy - chr3L 18840964 intron Indy - chr3L 18841084 intron Indy - chr3L_8_18840001 chr3L_18840001 RAL-774_125 1768 chr3L 18842352 18842410 chr3L 18842490 18842548 10 136 5.0 5.5 5.2 1.6 196 chr3L 18842352 intron,5` UTR Indy -,CR32027 + chr3L 18842450 intron,5` UTR Indy -,CR32027 + chr3L 18842548 intron,5` UTR Indy -,CR32027 + chr3L_10_18840001 chr3L_18840001 RAL-774_125 1769 chr3L 18860245 18860286 chr3L 18860396 18860437 9 150 2.0 5.0 3.5 2.0 192 chr3L 18860245 intergenic not near genes chr3L 18860341 intergenic not near genes chr3L 18860437 intergenic not near genes chr3L_9_18860001 chr3L_18860001 RAL-774_125 1770 chr3L 18866855 18866908 chr3L 18867634 18867703 13 790 17.0 20.0 18.5 0.7 848 chr3L 18866855 exon CG14074 + chr3L 18867279 exon CG14074 + chr3L 18867703 intergenic Dysb +,CG14074 + chr3L_13_18865001 chr3L_18865001 RAL-774_125 1771 chr3L 18924441 18924506 chr3L 18924567 18924632 9 126 3.5 2.5 3.0 2.2 191 chr3L 18924441 intron CG32204 - chr3L 18924536 intron CG32204 - chr3L 18924632 intron CG32204 - chr3L_9_18920001 chr3L_18920001 RAL-774_125 1772 chr3L 18933591 18933647 chr3L 18933730 18933790 13 143 2.5 6.5 4.5 2.4 199 chr3L 18933591 intron CG32204 - chr3L 18933690 intron CG32204 - chr3L 18933790 intron CG32204 - chr3L_13_18930001 chr3L_18930001 RAL-774_125 1773 chr3L 18935812 18935828 chr3L 18935951 18935967 4 139 7.5 3.5 5.5 0.6 155 chr3L 18935812 intron CG32204 - chr3L 18935890 intron CG32204 - chr3L 18935967 intron CG32204 - chr3L_4_18935001 chr3L_18935001 RAL-774_125 1774 chr3L 18969500 18969503 chr3L 18969626 18969628 4 126 16.5 6.5 11.5 0.3 128 chr3L 18969500 intergenic not near genes chr3L 18969564 intergenic not near genes chr3L 18969628 intergenic not near genes chr3L_4_18965001 chr3L_18965001 RAL-774_125 1775 chr3L 18969504 18969560 chr3L 18969625 18969686 15 125 7.0 6.0 6.5 2.0 182 chr3L 18969504 intergenic not near genes chr3L 18969595 intergenic not near genes chr3L 18969686 intergenic not near genes chr3L_15_18965001 chr3L_18965001 RAL-774_125 1776 chr3L 19008806 19008840 chr3L 19009194 19009228 jockey 8 385 4.5 5.0 4.8 1.4 422 chr3L 19008806 intron nkd - chr3L 19009017 intron nkd - chr3L 19009228 intron nkd - chr3L_8_19005001 chr3L_19005001 RAL-774_125 1777 chr3L 19008842 19008864 chr3L 19009185 19009251 jockey 6 379 4.0 4.5 4.2 1.2 409 chr3L 19008842 intron nkd - chr3L 19009046 intron nkd - chr3L 19009251 intron nkd - chr3L_6_19005001 chr3L_19005001 RAL-774_125 1778 chr3L 19015161 19015211 chr3L 19015295 19015341 8 132 0.5 6.0 3.2 1.9 180 chr3L 19015161 intron nkd - chr3L 19015251 intron nkd - chr3L 19015341 intron nkd - chr3L_8_19015001 chr3L_19015001 RAL-774_125 1779 chr3L 19025896 19025945 chr3L 19026030 19026080 8 132 8.0 0.5 4.2 1.5 184 chr3L 19025896 intron nkd - chr3L 19025988 intron nkd - chr3L 19026080 intron nkd - chr3L_8_19025001 chr3L_19025001 RAL-774_125 1780 chr3L 19084087 19084147 chr3L 19084228 19084256 10 131 4.5 3.0 3.8 2.1 169 chr3L 19084087 intron Mkp3 - chr3L 19084172 intron Mkp3 - chr3L 19084256 intron Mkp3 - chr3L_10_19080001 chr3L_19080001 RAL-774_125 1781 chr3L 19097548 19097586 chr3L 19098068 19098112 6 520 24.5 31.5 28.0 0.2 564 chr3L 19097548 exon CG10424 - chr3L 19097830 intergenic CG10424 -,CG14079 + chr3L 19098112 5` UTR CG14079 + chr3L_6_19095001 chr3L_19095001 RAL-774_125 1782 chr3L 19115594 19115654 chr3L 19115824 19115884 BS 13 225 7.0 3.0 5.0 2.2 290 chr3L 19115594 intron CG14082 - chr3L 19115739 intron CG14082 - chr3L 19115884 intron CG14082 - chr3L_13_19115001 chr3L_19115001 RAL-774_125 1783 chr3L 19117015 19117069 chr3L 19124493 19124566 mdg1 7 7488 4.0 5.5 4.8 1.2 7551 chr3L 19117015 intron CG14082 - chr3L 19120790 intron CG14082 - chr3L 19124566 intron CG14082 - chr3L_7_19120001 chr3L_19120001 RAL-774_125 1784 chr3L 19173710 19173739 chr3L 19173911 19173920 5 194 3.0 8.0 5.5 0.8 210 chr3L 19173710 intron fz2 - chr3L 19173815 intron fz2 - chr3L 19173920 intron fz2 - chr3L_5_19170001 chr3L_19170001 RAL-774_125 1785 chr3L 19182341 19182410 chr3L 19182473 19182541 7 131 2.5 1.0 1.8 2.5 200 chr3L 19182341 intron fz2 - chr3L 19182441 intron fz2 - chr3L 19182541 intron fz2 - chr3L_7_19180001 chr3L_19180001 RAL-774_125 1786 chr3L 19207093 19207122 chr3L 19207192 19207225 5 123 1.5 2.5 2.0 1.7 132 chr3L 19207093 intron fz2 - chr3L 19207159 intron fz2 - chr3L 19207225 intron fz2 - chr3L_5_19205001 chr3L_19205001 RAL-774_125 1787 chr3L 19208042 19208069 chr3L 19209435 19209486 Doc 4 1411 7.5 2.5 5.0 0.7 1444 chr3L 19208042 intron fz2 - chr3L 19208764 intron fz2 - chr3L 19209486 intron fz2 - chr3L_4_19205001 chr3L_19205001 RAL-774_125 1788 chr3L 19210111 19210135 chr3L 19210227 19210280 6 137 0.0 4.0 2.0 2.0 169 chr3L 19210111 intron fz2 - chr3L 19210196 intron fz2 - chr3L 19210280 intron fz2 - chr3L_6_19210001 chr3L_19210001 RAL-774_125 1789 chr3L 19220634 19220634 chr3L 22908066 22908067 6 3687432 23.0 18.0 20.5 0.3 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-774_125 1790 chr3L 19222360 19222394 chr3L 19222496 19222565 9 166 3.0 2.5 2.8 2.4 205 chr3L 19222360 intron fz2 - chr3L 19222462 intron fz2 - chr3L 19222565 intron fz2 - chr3L_9_19220001 chr3L_19220001 RAL-774_125 1791 chr3L 19248833 19248865 chr3L 19248973 19249006 6 141 4.0 3.5 3.8 1.2 173 chr3L 19248833 intergenic not near genes chr3L 19248920 intergenic not near genes chr3L 19249006 intergenic not near genes chr3L_6_19245001 chr3L_19245001 RAL-774_125 1792 chr3L 19279670 19279702 chr3L 19279768 19279828 5 119 2.0 2.5 2.2 1.6 158 chr3L 19279670 intron CG14086 + chr3L 19279749 exon CG14086 + chr3L 19279828 3` UTR CG14086 + chr3L_5_19275001 chr3L_19275001 RAL-774_125 1793 chr3L 19390685 19390757 chr3L 19390827 19390903 12 146 2.0 5.5 3.8 2.5 218 chr3L 19390685 intron CG32206 - chr3L 19390794 intron CG32206 - chr3L 19390903 intron CG32206 - chr3L_12_19390001 chr3L_19390001 RAL-774_125 1794 chr3L 19437008 19437025 chr3L 19437137 19437151 6 131 0.5 9.0 4.8 1.0 143 chr3L 19437008 intergenic not near genes chr3L 19437080 intergenic not near genes chr3L 19437151 intergenic not near genes chr3L_6_19435001 chr3L_19435001 RAL-774_125 1795 chr3L 19453987 19454021 chr3L 19454153 19454176 5 158 9.0 6.5 7.8 0.6 189 chr3L 19453987 intergenic not near genes chr3L 19454082 intergenic not near genes chr3L 19454176 intergenic not near genes chr3L_5_19450001 chr3L_19450001 RAL-774_125 1796 chr3L 19454026 19454048 chr3L 19454152 19454205 7 150 5.0 6.5 5.8 1.0 179 chr3L 19454026 intergenic not near genes chr3L 19454116 intergenic not near genes chr3L 19454205 intergenic not near genes chr3L_7_19450001 chr3L_19450001 RAL-774_125 1797 chr3L 19493858 19493930 chr3L 19494261 19494328 10 406 4.0 6.0 5.0 1.7 470 chr3L 19493858 intron CG9449 - chr3L 19494093 intron CG9449 - chr3L 19494328 intron CG9449 - chr3L_10_19490001 chr3L_19490001 RAL-774_125 1798 chr3L 19600344 19600375 chr3L 19601340 19601415 18 1006 20.0 33.0 26.5 0.7 1071 chr3L 19600344 exon Taf6 + chr3L 19600880 intron Taf6 + chr3L 19601415 intergenic Taf6 +,CG9368 + chr3L_18_19600001 chr3L_19600001 RAL-774_125 1799 chr3L 19695397 19695433 chr3L 19695519 19695558 9 124 4.0 5.0 4.5 1.6 161 chr3L 19695397 intergenic verm - chr3L 19695478 intergenic verm - chr3L 19695558 intergenic verm - chr3L_9_19695001 chr3L_19695001 RAL-774_125 1800 chr3L 19792334 19792361 chr3L 19792479 19792506 7 143 8.0 4.5 6.2 1.0 172 chr3L 19792334 intron,intron CG42637 -,Gyc76C - chr3L 19792420 intron,intron CG42637 -,Gyc76C - chr3L 19792506 intron,intron CG42637 -,Gyc76C - chr3L_7_19790001 chr3L_19790001 RAL-774_125 1801 chr3L 19820254 19820313 chr3L 19827854 19827912 412 7 7599 4.5 5.5 5.0 1.2 7658 chr3L 19820254 intron Deaf1 + chr3L 19824083 intron Deaf1 + chr3L 19827912 intron Deaf1 + chr3L_7_19820001 chr3L_19820001 RAL-774_125 1802 chr3L 19846578 19846627 chr3L 19846726 19846775 8 147 5.5 5.5 5.5 1.2 197 chr3L 19846578 intron Papss + chr3L 19846676 intron Papss + chr3L 19846775 intron Papss + chr3L_8_19845001 chr3L_19845001 RAL-774_125 1803 chr3L 19848471 19848518 chr3L 19857711 19857758 roo 17 9237 5.0 6.0 5.5 2.6 9287 chr3L 19848471 intron Papss + chr3L 19853114 intron Papss + chr3L 19857758 intron Papss + chr3L_17_19850001 chr3L_19850001 RAL-774_125 1804 chr3L 19861777 19861848 chr3L 19863615 19863684 S-element 12 1835 4.0 2.0 3.0 3.0 1907 chr3L 19861777 5` UTR CR45433 + chr3L 19862730 intergenic not near genes chr3L 19863684 intergenic not near genes chr3L_12_19860001 chr3L_19860001 RAL-774_125 1805 chr3L 19905042 19905114 chr3L 19905187 19905259 22 143 4.0 3.5 3.8 4.6 217 chr3L 19905042 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905150 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905259 intron,intron Mi-2 -,Su(Tpl) - chr3L_22_19905001 chr3L_19905001 RAL-774_125 1806 chr3L 19981163 19981224 chr3L 19981293 19981354 10 130 5.5 5.5 5.5 1.5 191 chr3L 19981163 intergenic not near genes chr3L 19981258 intergenic CG17732 + chr3L 19981354 intergenic CG17732 + chr3L_10_19980001 chr3L_19980001 RAL-774_125 1807 chr3L 20038967 20039021 chr3L 20039115 20039172 10 149 4.5 6.0 5.2 1.6 205 chr3L 20038967 intergenic not near genes chr3L 20039070 intergenic not near genes chr3L 20039172 intergenic not near genes chr3L_10_20035001 chr3L_20035001 RAL-774_125 1808 chr3L 20113613 20113658 chr3L 20122920 20122965 roo 8 9307 4.5 1.0 2.8 2.1 9352 chr3L 20113613 intergenic not near genes chr3L 20118289 intergenic not near genes chr3L 20122965 intergenic not near genes chr3L_8_20115001 chr3L_20115001 RAL-774_125 1809 chr3L 20212570 20212586 chr3L 20218196 20218213 mdg3 6 5626 8.0 3.0 5.5 0.9 5643 chr3L 20212570 intergenic CG7017 - chr3L 20215392 intergenic not near genes chr3L 20218213 intergenic CG6933 - chr3L_6_20215001 chr3L_20215001 RAL-774_125 1810 chr3L 20257288 20257354 chr3L 20258458 20258519 pogo 12 1169 2.0 5.0 3.5 2.7 1231 chr3L 20257288 intron rdgC + chr3L 20257904 intron rdgC + chr3L 20258519 intron rdgC + chr3L_12_20255001 chr3L_20255001 RAL-774_125 1811 chr3L 20315629 20315680 chr3L 20315758 20315810 12 128 3.0 4.0 3.5 2.7 181 chr3L 20315629 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315720 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315810 3` UTR,intron alphaSnap +,CR43875 - chr3L_12_20315001 chr3L_20315001 RAL-774_125 1812 chr3L 20406283 20406345 chr3L 20409819 20409881 21 3537 29.5 26.0 27.8 0.7 3598 chr3L 20406283 intergenic not near genes chr3L 20408082 exon CG13248 - chr3L 20409881 intron CG13248 - chr3L_21_20405001 chr3L_20405001 RAL-774_125 1813 chr3L 20444086 20444136 chr3L 20444213 20444268 11 136 8.0 7.5 7.8 1.2 182 chr3L 20444086 intron CG5910 + chr3L 20444177 intron CG5910 + chr3L 20444268 intron CG5910 + chr3L_11_20440001 chr3L_20440001 RAL-774_125 1814 chr3L 20462544 20462597 chr3L 20462675 20462727 13 131 3.0 6.0 4.5 2.4 183 chr3L 20462544 intron atk - chr3L 20462636 intron atk - chr3L 20462727 intron atk - chr3L_13_20460001 chr3L_20460001 RAL-774_125 1815 chr3L 20476712 20476777 chr3L 20484357 20484413 springer 22 7646 6.0 5.5 5.8 3.2 7701 chr3L 20476712 3` UTR isoQC + chr3L 20480562 intergenic not near genes chr3L 20484413 3` UTR ZnT77C - chr3L_22_20480001 chr3L_20480001 RAL-774_125 1816 chr3L 20487621 20487668 chr3L 20488122 20488163 INE-1 10 499 5.0 5.0 5.0 1.7 542 chr3L 20487621 intron ZnT77C - chr3L 20487892 intron ZnT77C - chr3L 20488163 exon ZnT77C - chr3L_10_20485001 chr3L_20485001 RAL-774_125 1817 chr3L 20525228 20525230 chr3L 22908066 22908067 6 2382838 10.0 18.0 14.0 0.4 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-774_125 1818 chr3L 20563747 20563817 chr3L 20563882 20563905 12 126 6.5 4.0 5.2 1.9 158 chr3L 20563747 intergenic not near genes chr3L 20563826 intergenic not near genes chr3L 20563905 intergenic not near genes chr3L_12_20560001 chr3L_20560001 RAL-774_125 1819 chr3L 20590037 20590090 chr3L 20590611 20590668 412 5 573 3.0 3.0 3.0 1.2 631 chr3L 20590037 intergenic not near genes chr3L 20590352 intergenic not near genes chr3L 20590668 intergenic not near genes chr3L_5_20590001 chr3L_20590001 RAL-774_125 1820 chr3L 20721410 20721458 chr3L 20721553 20721616 6 159 5.0 6.0 5.5 0.9 206 chr3L 20721410 intergenic not near genes chr3L 20721513 intergenic not near genes chr3L 20721616 intergenic not near genes chr3L_6_20720001 chr3L_20720001 RAL-774_125 1821 chr3L 20821273 20821287 chr3L 20824766 20824806 NOF 4 3510 3.5 6.5 5.0 0.7 3533 chr3L 20821273 intron Pka-R1 + chr3L 20823040 intron Pka-R1 + chr3L 20824806 intron Pka-R1 + chr3L_4_20820001 chr3L_20820001 RAL-774_125 1822 chr3L 20826336 20826377 chr3L 20826562 20826616 7 230 5.5 5.0 5.2 1.1 280 chr3L 20826336 intron Pka-R1 + chr3L 20826476 intron Pka-R1 + chr3L 20826616 intron Pka-R1 + chr3L_7_20825001 chr3L_20825001 RAL-774_125 1823 chr3L 20849233 20849291 chr3L 20849362 20849420 8 127 3.5 3.5 3.5 1.8 187 chr3L 20849233 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849420 intron CG32432 - chr3L_8_20845001 chr3L_20845001 RAL-774_125 1824 chr3L 20913714 20913760 chr3L 20913835 20913883 7 122 5.5 3.5 4.5 1.3 169 chr3L 20913714 intergenic CR43930 - chr3L 20913798 intergenic CR43930 - chr3L 20913883 intergenic CR43930 - chr3L_7_20910001 chr3L_20910001 RAL-774_125 1825 chr3L 21010329 21010390 chr3L 21010483 21010548 10 156 4.5 1.0 2.8 2.6 219 chr3L 21010329 intron skd - chr3L 21010438 intron skd - chr3L 21010548 intron skd - chr3L_10_21010001 chr3L_21010001 RAL-774_125 1826 chr3L 21014878 21014940 chr3L 21023401 21023470 Tirant 7 8516 4.0 7.0 5.5 1.1 8592 chr3L 21014878 intron skd - chr3L 21019174 intron skd - chr3L 21023470 intron skd - chr3L_7_21015001 chr3L_21015001 RAL-774_125 1827 chr3L 21038598 21038671 chr3L 21038729 21038761 17 125 6.5 6.0 6.2 2.4 163 chr3L 21038598 intron siz + chr3L 21038680 intron siz + chr3L 21038761 intron siz + chr3L_17_21035001 chr3L_21035001 RAL-774_125 1828 chr3L 21082170 21082235 chr3L 21082298 21082356 5 125 1.5 4.0 2.8 1.3 186 chr3L 21082170 intron ko - chr3L 21082263 intron ko - chr3L 21082356 intron ko - chr3L_5_21080001 chr3L_21080001 RAL-774_125 1829 chr3L 21151826 21151888 chr3L 21156960 21157016 flea 14 5134 4.5 2.5 3.5 3.1 5190 chr3L 21151826 intron Ac78C - chr3L 21154421 intron Ac78C - chr3L 21157016 intron Ac78C - chr3L_14_21150001 chr3L_21150001 RAL-774_125 1830 chr3L 21172831 21172869 chr3L 21172959 21173017 9 142 3.5 4.0 3.8 1.9 186 chr3L 21172831 intergenic chb +,asparagine-synthetase + chr3L 21172924 5` UTR chb + chr3L 21173017 5` UTR chb + chr3L_9_21170001 chr3L_21170001 RAL-774_125 1831 chr3L 21186045 21186079 chr3L 21186149 21186179 6 99 5.5 4.5 5.0 1.0 134 chr3L 21186045 intron CG42337 - chr3L 21186112 intron CG42337 - chr3L 21186179 intron CG42337 - chr3L_6_21185001 chr3L_21185001 RAL-774_125 1832 chr3L 21253201 21253271 chr3L 21255191 21255200 15 1981 19.5 20.5 20.0 0.7 1999 chr3L 21253201 intron Eip78C + chr3L 21254200 intron Eip78C + chr3L 21255200 intron Eip78C + chr3L_15_21250001 chr3L_21250001 RAL-774_125 1833 chr3L 21253050 21253111 chr3L 21255200 21255250 12 2142 24.5 18.5 21.5 0.5 2200 chr3L 21253050 intron Eip78C + chr3L 21254150 intron Eip78C + chr3L 21255250 intron Eip78C + chr3L_12_21250001 chr3L_21250001 RAL-774_125 1834 chr3L 21276896 21276919 chr3L 21277024 21277052 5 131 12.5 1.5 7.0 0.6 156 chr3L 21276896 intron AcCoAS - chr3L 21276974 intron AcCoAS - chr3L 21277052 intron AcCoAS - chr3L_5_21275001 chr3L_21275001 RAL-774_125 1835 chr3L 21306104 21306172 chr3L 21315313 21315381 roo 10 9208 7.5 4.5 6.0 1.4 9277 chr3L 21306104 3` UTR CG7632 + chr3L 21310742 intron Pc - chr3L 21315381 3` UTR Pc - chr3L_10_21310001 chr3L_21310001 RAL-774_125 1836 chr3L 21395107 21395149 chr3L 21395239 21395267 6 134 6.0 6.5 6.2 0.8 160 chr3L 21395107 intron rgn + chr3L 21395187 intron rgn + chr3L 21395267 intron rgn + chr3L_6_21395001 chr3L_21395001 RAL-774_125 1837 chr3L 21415092 21415161 chr3L 21415220 21415294 13 130 1.0 6.5 3.8 2.7 202 chr3L 21415092 intron rgn + chr3L 21415193 intron rgn + chr3L 21415294 intron rgn + chr3L_13_21415001 chr3L_21415001 RAL-774_125 1838 chr3L 21498833 21498851 chr3L 21500517 21500521 1360 6 1681 4.0 4.5 4.2 1.2 1688 chr3L 21498833 intron Glg1 - chr3L 21499677 intron Glg1 - chr3L 21500521 intron Glg1 - chr3L_6_21495001 chr3L_21495001 RAL-774_125 1839 chr3L 21501126 21501161 chr3L 21501270 21501305 1360 9 143 3.0 8.0 5.5 1.4 179 chr3L 21501126 intron Glg1 - chr3L 21501216 intron Glg1 - chr3L 21501305 intron Glg1 - chr3L_9_21500001 chr3L_21500001 RAL-774_125 1840 chr3L 21769009 21769070 chr3L 21769145 21769207 10 136 5.5 5.0 5.2 1.6 198 chr3L 21769009 intron,intron Syn1 -,CG42689 + chr3L 21769108 intron,intron Syn1 -,CG42689 + chr3L 21769207 intron,intron Syn1 -,CG42689 + chr3L_10_21765001 chr3L_21765001 RAL-774_125 1841 chr3L 21770001 21770024 chr3L 21770131 21770161 5 133 3.0 4.0 3.5 1.1 160 chr3L 21770001 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770081 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770161 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_5_21770001 chr3L_21770001 RAL-774_125 1842 chr3L 21849450 21849532 chr3L 21849582 21849664 12 132 2.0 3.0 2.5 3.4 214 chr3L 21849450 intron mub + chr3L 21849557 intron mub + chr3L 21849664 intron mub + chr3L_12_21845001 chr3L_21845001 RAL-774_125 1843 chr3L 21905296 21905343 chr3L 21905421 21905448 13 113 8.5 6.5 7.5 1.5 152 chr3L 21905296 intron mub + chr3L 21905372 intron mub + chr3L 21905448 intron mub + chr3L_13_21905001 chr3L_21905001 RAL-774_125 1844 chr3L 22016336 22016396 chr3L 22016492 22016552 12 160 4.5 5.0 4.8 2.1 216 chr3L 22016336 intergenic not near genes chr3L 22016444 intergenic not near genes chr3L 22016552 intergenic not near genes chr3L_12_22015001 chr3L_22015001 RAL-774_125 1845 chr3L 22033646 22033718 chr3L 22033774 22033846 14 121 7.5 7.0 7.2 1.7 200 chr3L 22033646 intergenic not near genes chr3L 22033746 intergenic not near genes chr3L 22033846 intergenic not near genes chr3L_14_22030001 chr3L_22030001 RAL-774_125 1846 chr3L 22046162 22046201 chr3L 22046315 22046354 12 149 5.0 5.0 5.0 2.0 192 chr3L 22046162 intron Oct-TyrR + chr3L 22046258 intron Oct-TyrR + chr3L 22046354 intron Oct-TyrR + chr3L_12_22045001 chr3L_22045001 RAL-774_125 1847 chr3L 22099632 22099690 chr3L 22105868 22105925 3S18 7 6232 4.5 3.5 4.0 1.4 6293 chr3L 22099632 intergenic not near genes chr3L 22102778 intergenic not near genes chr3L 22105925 intergenic not near genes chr3L_7_22100001 chr3L_22100001 RAL-774_125 1848 chr3L 22124907 22124970 chr3L 22125113 22125176 13 200 3.0 4.5 3.8 2.7 269 chr3L 22124907 intergenic not near genes chr3L 22125042 intergenic not near genes chr3L 22125176 intergenic not near genes chr3L_13_22125001 chr3L_22125001 RAL-774_125 1849 chr3L 22130482 22130517 chr3L 22130678 22130713 6 195 2.0 5.0 3.5 1.3 231 chr3L 22130482 intergenic not near genes chr3L 22130598 intergenic not near genes chr3L 22130713 intergenic not near genes chr3L_6_22130001 chr3L_22130001 RAL-774_125 1850 chr3L 22152133 22152201 chr3L 22152260 22152319 8 120 4.5 4.0 4.2 1.5 186 chr3L 22152133 intron olf413 + chr3L 22152226 intron olf413 + chr3L 22152319 intron olf413 + chr3L_8_22150001 chr3L_22150001 RAL-774_125 1851 chr3L 22166397 22166466 chr3L 22166525 22166544 9 122 4.5 1.0 2.8 2.4 147 chr3L 22166397 intron olf413 + chr3L 22166470 intron olf413 + chr3L 22166544 intron olf413 + chr3L_9_22165001 chr3L_22165001 RAL-774_125 1852 chr3L 22194282 22194318 chr3L 22194409 22194422 11 119 6.0 7.5 6.8 1.4 140 chr3L 22194282 intron olf413 + chr3L 22194352 intron olf413 + chr3L 22194422 intron olf413 + chr3L_11_22190001 chr3L_22190001 RAL-774_125 1853 chr3L 22447156 22447218 chr3L 22447290 22447354 14 139 5.0 4.5 4.8 2.4 198 chr3L 22447156 intergenic not near genes chr3L 22447255 intergenic not near genes chr3L 22447354 intergenic not near genes chr3L_14_22445001 chr3L_22445001 RAL-774_125 1854 chr3L 22477030 22477079 chr3L 22477171 22477203 6 136 1.5 4.5 3.0 1.5 173 chr3L 22477030 intergenic not near genes chr3L 22477116 intergenic not near genes chr3L 22477203 intergenic not near genes chr3L_6_22475001 chr3L_22475001 RAL-774_125 1855 chr3L 22507104 22507152 chr3L 22507219 22507228 10 104 4.0 3.5 3.8 2.1 124 chr3L 22507104 intergenic not near genes chr3L 22507166 intergenic not near genes chr3L 22507228 intergenic not near genes chr3L_10_22505001 chr3L_22505001 RAL-774_125 1856 chr3L 22554393 22554447 chr3L 22554509 22554564 11 122 3.0 4.0 3.5 2.4 171 chr3L 22554393 intergenic not near genes chr3L 22554478 intergenic not near genes chr3L 22554564 intergenic not near genes chr3L_11_22550001 chr3L_22550001 RAL-774_125 1857 chr3L 22555752 22555790 chr3L 22563247 22563279 blood 10 7508 3.0 2.0 2.5 2.9 7527 chr3L 22555752 intergenic not near genes chr3L 22559516 intergenic not near genes chr3L 22563279 intergenic not near genes chr3L_10_22555001 chr3L_22555001 RAL-774_125 1858 chr3L 22617151 22617214 chr3L 22624653 22624716 blood 11 7500 4.0 8.0 6.0 1.6 7565 chr3L 22617151 intron CG14459 - chr3L 22620934 intron CG14459 - chr3L 22624716 intron CG14459 - chr3L_11_22620001 chr3L_22620001 RAL-774_125 1859 chr3L 22705817 22705839 chr3L 22706019 22706053 6 207 7.5 8.0 7.8 0.7 236 chr3L 22705817 intergenic not near genes chr3L 22705935 intergenic not near genes chr3L 22706053 intergenic not near genes chr3L_6_22705001 chr3L_22705001 RAL-774_125 1860 chr3L 22705845 22705873 chr3L 22706009 22706072 7 199 4.0 6.5 5.2 1.1 227 chr3L 22705845 intergenic not near genes chr3L 22705958 intergenic not near genes chr3L 22706072 intergenic not near genes chr3L_7_22705001 chr3L_22705001 RAL-774_125 1861 chr3L 22736322 22736384 chr3L 22738070 22738132 12 1747 2.5 5.0 3.8 2.5 1810 chr3L 22736322 intron CG11241 - chr3L 22737227 intron CG11241 - chr3L 22738132 intron CG11241 - chr3L_12_22735001 chr3L_22735001 RAL-774_125 1862 chr3L 22853422 22853713 chr3L 22853559 22853849 25 132 4.0 6.5 5.2 4.0 427 chr3L 22853422 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853636 5` UTR CR43426 + chr3L 22853849 5` UTR CR43426 + chr3L_25_22850001 chr3L_22850001 RAL-774_125 1863 chr3L 22865942 22866007 chr3L 22867125 22867172 Doc 14 1181 5.5 5.5 5.5 2.2 1230 chr3L 22865942 exon CG33170 + chr3L 22866557 intron CG33170 + chr3L 22867172 intron CG33170 + chr3L_14_22865001 chr3L_22865001 RAL-774_125 1864 chr3L 9102774 9102814 chr3L 22908066 22908066 5 13805276 20.0 18.0 19.0 0.2 13805292 chr3L 9102774 exon bol - chr3L 16005420 exon mRpS31 + chr3L 22908066 intergenic not near genes chr3L_5_16005001 chr3L_16005001 RAL-774_125 1865 chr3L 19220633 19220637 chr3L 22908066 22908066 11 3687431 22.0 18.0 20.0 0.5 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_11_21060001 chr3L_21060001 RAL-774_125 1866 chr3L 20525228 20525229 chr3L 22908066 22908066 4 2382838 10.0 18.0 14.0 0.3 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-774_125 1867 chr3L 19220633 19220637 chr3L 22908067 22908067 12 3687432 22.0 18.0 20.0 0.6 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_12_21060001 chr3L_21060001 RAL-774_125 1868 chr3L 22908989 22909044 chr3L 22909120 22909177 20 132 3.5 2.5 3.0 5.0 188 chr3L 22908989 intergenic CR45661 + chr3L 22909083 intergenic CR45661 + chr3L 22909177 intergenic CR45661 + chr3L_20_22905001 chr3L_22905001 RAL-774_125 1869 chr3L 22989816 22989877 chr3L 22996840 22996901 297 10 7021 3.5 3.5 3.5 2.2 7085 chr3L 22989816 intergenic not near genes chr3L 22993358 intergenic not near genes chr3L 22996901 intergenic not near genes chr3L_10_22990001 chr3L_22990001 RAL-774_125 1870 chr3L 23402270 23402308 chr3L 23402382 23402431 7 123 6.0 4.0 5.0 1.2 161 chr3L 23402270 intergenic not near genes chr3L 23402350 intergenic not near genes chr3L 23402431 intergenic not near genes chr3L_7_23400001 chr3L_23400001 RAL-774_125 1871 chr3L 23875491 23875541 chr3L 23875616 23875672 5 124 4.0 4.0 4.0 1.0 181 chr3L 23875491 intron CG40470 - chr3L 23875582 intron CG40470 - chr3L 23875672 intron CG40470 - chr3L_5_23875001 chr3L_23875001 RAL-774_125 1872 chr3L 24012374 24012425 chr3L 24020765 24020806 roo 9 8387 3.5 4.0 3.8 1.9 8432 chr3L 24012374 intergenic not near genes chr3L 24016590 intergenic not near genes chr3L 24020806 intergenic not near genes chr3L_9_24015001 chr3L_24015001 RAL-774_125 1873 chr3L 24168768 24168802 chr3L 24176123 24176167 ZAM 10 7360 3.5 2.5 3.0 2.5 7399 chr3L 24168768 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176167 intron Snap25 + chr3L_10_24170001 chr3L_24170001 RAL-774_125 1874 chr3L 25354011 25354068 chr3L 25354241 25354279 8 221 4.5 3.0 3.8 1.7 268 chr3L 25354011 intergenic not near genes chr3L 25354145 intergenic not near genes chr3L 25354279 intergenic not near genes chr3L_8_25350001 chr3L_25350001 RAL-774_125 1875 chr3L 27390642 27390712 chr3L 27390771 27390841 10 123 18.5 25.5 22.0 0.4 199 chr3L 27390642 intron Dbp80 + chr3L 27390742 intron Dbp80 + chr3L 27390841 intron Dbp80 + chr3L_10_27390001 chr3L_27390001 RAL-774_125 1876 chr3L 28005532 28005586 chr3L 28005659 28005712 7 123 6.5 2.5 4.5 1.3 180 chr3L 28005532 intron CG17514 - chr3L 28005622 intron CG17514 - chr3L 28005712 intron CG17514 - chr3L_7_28005001 chr3L_28005001 RAL-774_125 1877 chr3R 1521166 1521180 chr3R 1521244 1521248 11 118 12.5 13.0 12.8 0.8 82 chr3R 1521166 intergenic not near genes chr3R 1521207 intergenic not near genes chr3R 1521248 intergenic not near genes chr3R_11_1520001 chr3R_1520001 RAL-774_125 1878 chr3R 2534097 2534143 chr3R 2541713 2541732 6 7603 9.5 12.5 11.0 0.5 7635 chr3R 2534097 intergenic not near genes chr3R 2537914 intergenic not near genes chr3R 2541732 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-774_125 1879 chr3R 2556880 2556951 chr3R 2557570 2557634 8 686 15.5 15.5 15.5 0.5 754 chr3R 2556880 intron CG41056 - chr3R 2557257 intron CG41056 - chr3R 2557634 intron CG41056 - chr3R_8_2555001 chr3R_2555001 RAL-774_125 1880 chr3R 4132853 4132886 chr3R 4133057 4133084 6 202 4.0 1.5 2.8 1.6 231 chr3R 4132853 intron Gfat1 + chr3R 4132968 intron Gfat1 + chr3R 4133084 intron Gfat1 + chr3R_6_4130001 chr3R_4130001 RAL-774_125 1881 chr3R 4206041 4206093 chr3R 4211656 4211718 mdg3 11 5622 3.5 1.5 2.5 3.1 5677 chr3R 4206041 intron CG14636 - chr3R 4208880 intron CG14636 - chr3R 4211718 intron CG14636 - chr3R_11_4205001 chr3R_4205001 RAL-774_125 1882 chr3R 4366735 4366775 chr3R 4375160 4375208 roo 9 8430 5.5 7.0 6.2 1.2 8473 chr3R 4366735 3` UTR CG1090 + chr3R 4370972 intergenic not near genes chr3R 4375208 5` UTR CR44922 + chr3R_9_4370001 chr3R_4370001 RAL-774_125 1883 chr3R 4408371 4408428 chr3R 4412725 4412782 Juan 13 4351 6.0 5.0 5.5 2.0 4411 chr3R 4408371 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412782 intron CG32944 - chr3R_13_4410001 chr3R_4410001 RAL-774_125 1884 chr3R 4609512 4609555 chr3R 4610726 4610737 1360 9 1209 5.0 4.5 4.8 1.6 1225 chr3R 4609512 intergenic not near genes chr3R 4610124 intergenic not near genes chr3R 4610737 intergenic not near genes chr3R_9_4610001 chr3R_4610001 RAL-774_125 1885 chr3R 4657230 4657274 chr3R 4657584 4657613 6 348 3.0 6.0 4.5 1.1 383 chr3R 4657230 intron spartin + chr3R 4657422 intron spartin + chr3R 4657613 exon spartin + chr3R_6_4655001 chr3R_4655001 RAL-774_125 1886 chr3R 4680679 4680740 chr3R 4680808 4680852 14 123 10.0 10.0 10.0 1.3 173 chr3R 4680679 intron CG43427 + chr3R 4680766 intron CG43427 + chr3R 4680852 intron CG43427 + chr3R_14_4680001 chr3R_4680001 RAL-774_125 1887 chr3R 4745550 4745611 chr3R 4745677 4745715 6 125 5.0 0.0 2.5 1.7 165 chr3R 4745550 intron tacc - chr3R 4745632 intron tacc - chr3R 4745715 intron tacc - chr3R_6_4745001 chr3R_4745001 RAL-774_125 1888 chr3R 4753202 4753217 chr3R 4757555 4757570 F-element 5 4353 12.5 8.0 10.2 0.4 4368 chr3R 4753202 intron,intron atms +,CG44098 - chr3R 4755386 intron,intron atms +,CG44098 - chr3R 4757570 intron,exon atms +,CG44098 - chr3R_5_4755001 chr3R_4755001 RAL-774_125 1889 chr3R 4753226 4753259 chr3R 4757553 4757590 F-element 11 4344 7.0 7.5 7.2 1.3 4364 chr3R 4753226 intron,intron atms +,CG44098 - chr3R 4755408 intron,intron atms +,CG44098 - chr3R 4757590 intron,exon atms +,CG44098 - chr3R_11_4755001 chr3R_4755001 RAL-774_125 1890 chr3R 4769116 4769138 chr3R 4769244 4769266 6 122 5.0 3.0 4.0 1.2 150 chr3R 4769116 intron,intron atms +,CG44098 - chr3R 4769191 intron,intron atms +,CG44098 - chr3R 4769266 intron,intron atms +,CG44098 - chr3R_6_4765001 chr3R_4765001 RAL-774_125 1891 chr3R 4769140 4769156 chr3R 4769240 4769283 7 119 4.5 3.0 3.8 1.5 143 chr3R 4769140 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769283 intron,intron atms +,CG44098 - chr3R_7_4765001 chr3R_4765001 RAL-774_125 1892 chr3R 4861531 4861597 chr3R 4861657 4861706 14 119 6.0 6.0 6.0 2.0 175 chr3R 4861531 intron opa + chr3R 4861618 intron opa + chr3R 4861706 intron opa + chr3R_14_4860001 chr3R_4860001 RAL-774_125 1893 chr3R 4887432 4887505 chr3R 4894858 4894922 rover 8 7420 3.0 4.5 3.8 1.7 7490 chr3R 4887432 intergenic not near genes chr3R 4891177 intergenic not near genes chr3R 4894922 intergenic not near genes chr3R_8_4890001 chr3R_4890001 RAL-774_125 1894 chr3R 4922297 4922347 chr3R 4922421 4922441 11 122 5.0 4.0 4.5 2.0 144 chr3R 4922297 intron Cdep + chr3R 4922369 intron Cdep + chr3R 4922441 intron Cdep + chr3R_11_4920001 chr3R_4920001 RAL-774_125 1895 chr3R 4948340 4948392 chr3R 4949010 4949064 11 671 18.5 20.0 19.2 0.5 724 chr3R 4948340 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948702 intergenic UbcD6 - chr3R 4949064 3` UTR UbcD6 - chr3R_11_4945001 chr3R_4945001 RAL-774_125 1896 chr3R 4965973 4966033 chr3R 4966110 4966155 11 139 1.0 4.5 2.8 2.9 182 chr3R 4965973 intron CG1124 + chr3R 4966064 intron CG1124 + chr3R 4966155 intron CG1124 + chr3R_11_4965001 chr3R_4965001 RAL-774_125 1897 chr3R 4981402 4981434 chr3R 4981514 4981525 5 108 7.0 12.5 9.8 0.5 123 chr3R 4981402 intergenic not near genes chr3R 4981464 intergenic not near genes chr3R 4981525 intergenic CG14662 - chr3R_5_4980001 chr3R_4980001 RAL-774_125 1898 chr3R 5045803 5045869 chr3R 5052954 5053021 HMS-Beagle 9 7152 5.5 6.5 6.0 1.3 7218 chr3R 5045803 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5053021 intergenic CR45588 - chr3R_9_5045001 chr3R_5045001 RAL-774_125 1899 chr3R 5067936 5068013 chr3R 5073503 5073573 mdg3 18 5565 3.5 4.0 3.8 3.8 5637 chr3R 5067936 intergenic not near genes chr3R 5070754 intergenic not near genes chr3R 5073573 intergenic not near genes chr3R_18_5070001 chr3R_5070001 RAL-774_125 1900 chr3R 5081063 5081125 chr3R 5081218 5081282 5 149 2.5 4.0 3.2 1.2 219 chr3R 5081063 3` UTR corto - chr3R 5081172 3` UTR corto - chr3R 5081282 3` UTR corto - chr3R_5_5080001 chr3R_5080001 RAL-774_125 1901 chr3R 5158098 5158164 chr3R 5158241 5158307 12 140 6.5 4.5 5.5 1.8 209 chr3R 5158098 intron dpr16 + chr3R 5158202 intron dpr16 + chr3R 5158307 intron dpr16 + chr3R_12_5155001 chr3R_5155001 RAL-774_125 1902 chr3R 5191366 5191446 chr3R 5191602 5191672 20 238 27.5 32.0 29.8 0.6 306 chr3R 5191366 intron cno - chr3R 5191519 intron cno - chr3R 5191672 intron cno - chr3R_20_5190001 chr3R_5190001 RAL-774_125 1903 chr3R 5205097 5205136 chr3R 5205239 5205277 13 137 4.5 5.0 4.8 2.2 180 chr3R 5205097 intron cno - chr3R 5205187 intron cno - chr3R 5205277 intron cno - chr3R_13_5205001 chr3R_5205001 RAL-774_125 1904 chr3R 5338374 5338414 chr3R 5343587 5343640 Rt1c 8 5224 5.5 6.5 6.0 1.1 5266 chr3R 5338374 intron mtd - chr3R 5341007 intron mtd - chr3R 5343640 intron mtd - chr3R_8_5340001 chr3R_5340001 RAL-774_125 1905 chr3R 5397278 5397333 chr3R 5397407 5397462 8 129 1.0 1.0 1.0 4.0 184 chr3R 5397278 3` UTR CG1172 + chr3R 5397370 3` UTR CG1172 + chr3R 5397462 3` UTR CG1172 + chr3R_8_5395001 chr3R_5395001 RAL-774_125 1906 chr3R 5445940 5445976 chr3R 5452445 5452481 Burdock 7 6508 5.5 5.5 5.5 1.1 6541 chr3R 5445940 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452481 intron CG14669 + chr3R_7_5445001 chr3R_5445001 RAL-774_125 1907 chr3R 5506796 5506869 chr3R 5506978 5507046 12 180 3.0 4.0 3.5 2.7 250 chr3R 5506796 intergenic not near genes chr3R 5506921 intergenic not near genes chr3R 5507046 intergenic not near genes chr3R_12_5505001 chr3R_5505001 RAL-774_125 1908 chr3R 5526550 5526566 chr3R 5526682 5526698 4 132 10.5 5.5 8.0 0.4 148 chr3R 5526550 intron Itp-r83A + chr3R 5526624 intron Itp-r83A + chr3R 5526698 intron Itp-r83A + chr3R_4_5525001 chr3R_5525001 RAL-774_125 1909 chr3R 5578745 5578814 chr3R 5578872 5578920 13 121 4.5 6.0 5.2 2.1 175 chr3R 5578745 3` UTR CRMP + chr3R 5578832 3` UTR CRMP + chr3R 5578920 3` UTR CRMP + chr3R_13_5575001 chr3R_5575001 RAL-774_125 1910 chr3R 5712048 5712100 chr3R 5712170 5712238 9 135 4.5 6.0 5.2 1.5 190 chr3R 5712048 3` UTR plx + chr3R 5712143 3` UTR plx + chr3R 5712238 3` UTR plx + chr3R_9_5710001 chr3R_5710001 RAL-774_125 1911 chr3R 5745996 5746034 chr3R 5746262 5746323 pogo 10 287 3.5 6.0 4.8 1.7 327 chr3R 5745996 3` UTR Madm + chr3R 5746160 3` UTR Madm + chr3R 5746323 3` UTR Madm + chr3R_10_5745001 chr3R_5745001 RAL-774_125 1912 chr3R 5746989 5747034 chr3R 5753230 5753275 diver 7 6240 4.5 4.0 4.2 1.3 6286 chr3R 5746989 intergenic Madm + chr3R 5750132 intergenic not near genes chr3R 5753275 intergenic CG2091 - chr3R_7_5750001 chr3R_5750001 RAL-774_125 1913 chr3R 5772328 5772405 chr3R 5772536 5772593 12 204 3.5 5.5 4.5 2.2 265 chr3R 5772328 intron CG2082 - chr3R 5772460 intron CG2082 - chr3R 5772593 intron CG2082 - chr3R_12_5770001 chr3R_5770001 RAL-774_125 1914 chr3R 5809084 5809133 chr3R 5809354 5809424 pogo 12 286 2.0 4.0 3.0 3.0 340 chr3R 5809084 3` UTR CG11000 + chr3R 5809254 3` UTR CG11000 + chr3R 5809424 3` UTR CG11000 + chr3R_12_5805001 chr3R_5805001 RAL-774_125 1915 chr3R 5822345 5822401 chr3R 5823561 5823618 1360 9 1216 2.5 4.0 3.2 2.1 1273 chr3R 5822345 3` UTR CG2023 - chr3R 5822982 3` UTR CG2023 - chr3R 5823618 3` UTR CG2023 - chr3R_9_5820001 chr3R_5820001 RAL-774_125 1916 chr3R 5846844 5846884 chr3R 5846970 5847010 6 123 4.5 3.5 4.0 1.2 166 chr3R 5846844 intergenic CG1213 +,CG14676 + chr3R 5846927 intergenic CG14676 +,CG1213 + chr3R 5847010 intergenic CG14676 +,CG1213 + chr3R_6_5845001 chr3R_5845001 RAL-774_125 1917 chr3R 5895916 5895963 chr3R 5896171 5896226 10 260 1.0 4.0 2.5 2.9 310 chr3R 5895916 intron CG34113 - chr3R 5896071 intron CG34113 - chr3R 5896226 intron CG34113 - chr3R_10_5895001 chr3R_5895001 RAL-774_125 1918 chr3R 5927518 5927573 chr3R 5927800 5927863 pogo 7 278 5.0 3.0 4.0 1.4 345 chr3R 5927518 intron CG34113 - chr3R 5927690 intron CG34113 - chr3R 5927863 intron CG34113 - chr3R_7_5925001 chr3R_5925001 RAL-774_125 1919 chr3R 5935319 5935380 chr3R 5935445 5935506 10 125 1.5 1.5 1.5 4.0 187 chr3R 5935319 intron CG34113 - chr3R 5935412 intron CG34113 - chr3R 5935506 intron CG34113 - chr3R_10_5935001 chr3R_5935001 RAL-774_125 1920 chr3R 5943355 5943415 chr3R 5943484 5943529 13 125 1.0 2.0 1.5 5.2 174 chr3R 5943355 intron CG34113 - chr3R 5943442 intron CG34113 - chr3R 5943529 intron CG34113 - chr3R_13_5940001 chr3R_5940001 RAL-774_125 1921 chr3R 6006282 6006307 chr3R 6006417 6006441 6 133 8.5 3.5 6.0 0.9 159 chr3R 6006282 intron Rm62 - chr3R 6006362 intron Rm62 - chr3R 6006441 intron Rm62 - chr3R_6_6005001 chr3R_6005001 RAL-774_125 1922 chr3R 6006313 6006347 chr3R 6006415 6006482 11 130 3.5 3.5 3.5 2.4 169 chr3R 6006313 intron Rm62 - chr3R 6006398 intron Rm62 - chr3R 6006482 intron Rm62 - chr3R_11_6005001 chr3R_6005001 RAL-774_125 1923 chr3R 6015929 6015970 chr3R 6024450 6024501 Tirant 5 8523 3.5 4.0 3.8 1.0 8572 chr3R 6015929 intergenic not near genes chr3R 6020215 intergenic not near genes chr3R 6024501 intergenic not near genes chr3R_5_6020001 chr3R_6020001 RAL-774_125 1924 chr3R 6043617 6043658 chr3R 6043884 6043917 4 262 2.5 5.5 4.0 0.8 300 chr3R 6043617 intergenic not near genes chr3R 6043767 intergenic not near genes chr3R 6043917 intergenic not near genes chr3R_4_6040001 chr3R_6040001 RAL-774_125 1925 chr3R 6048407 6048453 chr3R 6048532 6048586 5 129 7.5 4.5 6.0 0.7 179 chr3R 6048407 intergenic not near genes chr3R 6048496 intergenic not near genes chr3R 6048586 intergenic not near genes chr3R_5_6045001 chr3R_6045001 RAL-774_125 1926 chr3R 6121136 6121176 chr3R 6121371 6121444 BS 9 253 0.5 0.5 0.5 6.0 308 chr3R 6121136 intergenic not near genes chr3R 6121290 intergenic not near genes chr3R 6121444 intergenic not near genes chr3R_9_6120001 chr3R_6120001 RAL-774_125 1927 chr3R 6158477 6158530 chr3R 6167110 6167137 Tirant 4 8614 5.0 5.0 5.0 0.7 8660 chr3R 6158477 intergenic not near genes chr3R 6162807 intergenic not near genes chr3R 6167137 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-774_125 1928 chr3R 6175150 6175188 chr3R 6182452 6182500 HMS-Beagle2 7 7309 2.5 4.5 3.5 1.6 7350 chr3R 6175150 intergenic Osi1 + chr3R 6178825 intron CR45194 + chr3R 6182500 intergenic CR45194 + chr3R_7_6175001 chr3R_6175001 RAL-774_125 1929 chr3R 6191130 6191186 chr3R 6191254 6191311 9 128 7.5 5.0 6.2 1.2 181 chr3R 6191130 intron NPFR + chr3R 6191220 intron NPFR + chr3R 6191311 intron NPFR + chr3R_9_6190001 chr3R_6190001 RAL-774_125 1930 chr3R 6330753 6330801 chr3R 6330918 6330966 13 163 4.5 5.0 4.8 2.2 213 chr3R 6330753 exon Osi18 + chr3R 6330860 intron Osi18 + chr3R 6330966 intron Osi18 + chr3R_13_6330001 chr3R_6330001 RAL-774_125 1931 chr3R 6461554 6461602 chr3R 6461684 6461727 4 129 3.0 5.5 4.2 0.8 173 chr3R 6461554 intergenic not near genes chr3R 6461640 intergenic not near genes chr3R 6461727 intergenic not near genes chr3R_4_6460001 chr3R_6460001 RAL-774_125 1932 chr3R 6484020 6484080 chr3R 6484163 6484223 10 142 4.5 6.0 5.2 1.6 203 chr3R 6484020 intron CG15186 + chr3R 6484122 intron CG15186 + chr3R 6484223 intron CG15186 + chr3R_10_6480001 chr3R_6480001 RAL-774_125 1933 chr3R 6496614 6496686 chr3R 6496752 6496819 25 130 2.5 3.0 2.8 6.6 205 chr3R 6496614 intergenic not near genes chr3R 6496716 intergenic not near genes chr3R 6496819 intergenic not near genes chr3R_25_6495001 chr3R_6495001 RAL-774_125 1934 chr3R 6509990 6510046 chr3R 6515121 6515177 jockey 10 5127 3.5 6.0 4.8 1.7 5187 chr3R 6509990 intergenic not near genes chr3R 6512584 intergenic not near genes chr3R 6515177 intergenic not near genes chr3R_10_6510001 chr3R_6510001 RAL-774_125 1935 chr3R 6519078 6519143 chr3R 6519236 6519282 10 157 2.5 5.5 4.0 2.0 204 chr3R 6519078 intergenic not near genes chr3R 6519180 intergenic not near genes chr3R 6519282 intergenic not near genes chr3R_10_6515001 chr3R_6515001 RAL-774_125 1936 chr3R 6610036 6610076 chr3R 6610197 6610278 5 194 2.0 1.5 1.8 1.8 242 chr3R 6610036 intergenic not near genes chr3R 6610157 intergenic not near genes chr3R 6610278 intergenic not near genes chr3R_5_6610001 chr3R_6610001 RAL-774_125 1937 chr3R 6621831 6621885 chr3R 6621973 6622019 17 143 5.0 6.5 5.8 2.5 188 chr3R 6621831 intergenic not near genes chr3R 6621925 intergenic not near genes chr3R 6622019 intergenic not near genes chr3R_17_6620001 chr3R_6620001 RAL-774_125 1938 chr3R 6624222 6624269 chr3R 6624348 6624401 9 130 6.0 4.5 5.2 1.5 179 chr3R 6624222 intergenic not near genes chr3R 6624312 intergenic not near genes chr3R 6624401 intergenic not near genes chr3R_9_6620001 chr3R_6620001 RAL-774_125 1939 chr3R 6639868 6639932 chr3R 6639991 6640064 15 126 2.5 4.5 3.5 3.3 196 chr3R 6639868 intergenic not near genes chr3R 6639966 intergenic not near genes chr3R 6640064 intergenic not near genes chr3R_15_6635001 chr3R_6635001 RAL-774_125 1940 chr3R 6655723 6655782 chr3R 6656040 6656104 10 321 6.0 4.0 5.0 1.7 381 chr3R 6655723 exon Taf1 + chr3R 6655914 3` UTR Taf1 + chr3R 6656104 intergenic Taf1 +,CG1307 - chr3R_10_6655001 chr3R_6655001 RAL-774_125 1941 chr3R 6663566 6663629 chr3R 6663696 6663704 15 123 7.0 5.0 6.0 2.1 138 chr3R 6663566 intron lab - chr3R 6663635 intron lab - chr3R 6663704 intron lab - chr3R_15_6660001 chr3R_6660001 RAL-774_125 1942 chr3R 6670539 6670588 chr3R 6670683 6670743 5 151 4.5 3.5 4.0 1.0 204 chr3R 6670539 intron lab - chr3R 6670641 intron lab - chr3R 6670743 intron lab - chr3R_5_6670001 chr3R_6670001 RAL-774_125 1943 chr3R 6737464 6737524 chr3R 6739293 6739350 Doc 15 1827 1.0 8.5 4.8 2.6 1886 chr3R 6737464 intron pb - chr3R 6738407 intron pb - chr3R 6739350 intron pb - chr3R_15_6735001 chr3R_6735001 RAL-774_125 1944 chr3R 6740975 6741030 chr3R 6741088 6741163 17 130 3.5 3.5 3.5 3.8 188 chr3R 6740975 intron pb - chr3R 6741069 intron pb - chr3R 6741163 intron pb - chr3R_17_6740001 chr3R_6740001 RAL-774_125 1945 chr3R 6780410 6780457 chr3R 6780538 6780590 9 130 5.0 5.0 5.0 1.5 180 chr3R 6780410 intergenic not near genes chr3R 6780500 intergenic not near genes chr3R 6780590 intergenic not near genes chr3R_9_6780001 chr3R_6780001 RAL-774_125 1946 chr3R 6819608 6819651 chr3R 6819742 6819785 7 133 1.0 3.5 2.2 2.2 177 chr3R 6819608 intergenic not near genes chr3R 6819696 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819785 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R_7_6815001 chr3R_6815001 RAL-774_125 1947 chr3R 6827975 6828033 chr3R 6828101 6828159 7 125 1.5 5.5 3.5 1.6 184 chr3R 6827975 intron Scr - chr3R 6828067 intron Scr - chr3R 6828159 intron Scr - chr3R_7_6825001 chr3R_6825001 RAL-774_125 1948 chr3R 6914715 6914764 chr3R 6914845 6914900 14 141 3.0 2.0 2.5 4.0 185 chr3R 6914715 intron Antp - chr3R 6914808 intron Antp - chr3R 6914900 intron Antp - chr3R_14_6910001 chr3R_6910001 RAL-774_125 1949 chr3R 6958881 6958952 chr3R 6959137 6959213 25 254 1.5 2.5 2.0 8.3 332 chr3R 6958881 intron Antp - chr3R 6959047 intron Antp - chr3R 6959213 intron Antp - chr3R_25_6955001 chr3R_6955001 RAL-774_125 1950 chr3R 7036754 7036780 chr3R 7036873 7036909 7 128 4.0 8.0 6.0 1.0 155 chr3R 7036754 intergenic not near genes chr3R 7036832 intergenic not near genes chr3R 7036909 intergenic not near genes chr3R_7_7035001 chr3R_7035001 RAL-774_125 1951 chr3R 7060211 7060231 chr3R 7060342 7060361 5 131 8.0 3.5 5.8 0.7 150 chr3R 7060211 3` UTR dj + chr3R 7060286 3` UTR dj + chr3R 7060361 3` UTR dj + chr3R_5_7060001 chr3R_7060001 RAL-774_125 1952 chr3R 7092741 7092764 chr3R 7093355 7093370 5 609 15.0 4.5 9.8 0.5 629 chr3R 7092741 3` UTR CR43685 - chr3R 7093056 intron CR43685 - chr3R 7093370 3` UTR CR43685 - chr3R_5_7090001 chr3R_7090001 RAL-774_125 1953 chr3R 7092774 7092817 chr3R 7093348 7093398 10 606 5.0 3.5 4.2 1.9 624 chr3R 7092774 3` UTR CR43685 - chr3R 7093086 intron CR43685 - chr3R 7093398 3` UTR CR43685 - chr3R_10_7090001 chr3R_7090001 RAL-774_125 1954 chr3R 7103279 7103304 chr3R 7103395 7103415 5 115 3.5 9.0 6.2 0.7 136 chr3R 7103279 intron Alh - chr3R 7103347 intron Alh - chr3R 7103415 intron Alh - chr3R_5_7100001 chr3R_7100001 RAL-774_125 1955 chr3R 7126474 7126528 chr3R 7126619 7126673 11 143 2.0 3.5 2.8 2.9 199 chr3R 7126474 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126574 3` UTR CG10068 - chr3R 7126673 3` UTR CG10068 - chr3R_11_7125001 chr3R_7125001 RAL-774_125 1956 chr3R 7173642 7173701 chr3R 7173772 7173831 9 128 5.5 2.5 4.0 1.8 189 chr3R 7173642 intron sas + chr3R 7173736 intron sas + chr3R 7173831 intron sas + chr3R_9_7170001 chr3R_7170001 RAL-774_125 1957 chr3R 7187690 7187738 chr3R 7187828 7187870 8 137 4.5 6.5 5.5 1.2 180 chr3R 7187690 intron lap + chr3R 7187780 intron lap + chr3R 7187870 intron lap + chr3R_8_7185001 chr3R_7185001 RAL-774_125 1958 chr3R 7210554 7210612 chr3R 7210675 7210743 6 130 0.0 2.5 1.2 2.7 189 chr3R 7210554 intergenic not near genes chr3R 7210648 intergenic not near genes chr3R 7210743 intergenic not near genes chr3R_6_7210001 chr3R_7210001 RAL-774_125 1959 chr3R 7319761 7319786 chr3R 7319881 7319893 5 120 7.0 5.0 6.0 0.7 132 chr3R 7319761 intergenic not near genes chr3R 7319827 intergenic not near genes chr3R 7319893 intergenic not near genes chr3R_5_7315001 chr3R_7315001 RAL-774_125 1960 chr3R 7621487 7621552 chr3R 7621625 7621692 7 138 2.5 3.5 3.0 1.8 205 chr3R 7621487 intron CG34127 - chr3R 7621590 intron CG34127 - chr3R 7621692 intron CG34127 - chr3R_7_7620001 chr3R_7620001 RAL-774_125 1961 chr3R 7639742 7639811 chr3R 7639933 7640002 10 177 5.0 4.0 4.5 1.8 260 chr3R 7639742 intergenic CG34127 - chr3R 7639872 intergenic CG34127 - chr3R 7640002 intergenic not near genes chr3R_10_7635001 chr3R_7635001 RAL-774_125 1962 chr3R 7660751 7660811 chr3R 7660892 7660945 12 132 4.0 1.5 2.8 3.2 194 chr3R 7660751 intron Nlg1 + chr3R 7660848 intron Nlg1 + chr3R 7660945 intron Nlg1 + chr3R_12_7660001 chr3R_7660001 RAL-774_125 1963 chr3R 7694534 7694602 chr3R 7713645 7713713 invader3 10 19110 1.0 4.0 2.5 2.9 19179 chr3R 7694534 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713713 intergenic not near genes chr3R_10_7700001 chr3R_7700001 RAL-774_125 1964 chr3R 7729420 7729488 chr3R 7737408 7737476 Stalker2 11 7986 6.0 4.5 5.2 1.8 8056 chr3R 7729420 intergenic not near genes chr3R 7733448 intergenic not near genes chr3R 7737476 intergenic not near genes chr3R_11_7730001 chr3R_7730001 RAL-774_125 1965 chr3R 7809894 7809941 chr3R 7809999 7810069 9 114 4.5 1.0 2.8 2.4 175 chr3R 7809894 5` UTR CG2993 - chr3R 7809982 5` UTR CG2993 - chr3R 7810069 intergenic CG2993 -,CG31472 + chr3R_9_7805001 chr3R_7805001 RAL-774_125 1966 chr3R 8073623 8073681 chr3R 8073771 8073836 12 152 5.0 3.0 4.0 2.4 213 chr3R 8073623 intron mAChR-B + chr3R 8073730 intron mAChR-B + chr3R 8073836 intron mAChR-B + chr3R_12_8070001 chr3R_8070001 RAL-774_125 1967 chr3R 8090234 8090284 chr3R 8090451 8090511 13 225 4.0 7.0 5.5 2.0 277 chr3R 8090234 5` UTR CR44330 + chr3R 8090372 intergenic CR44330 + chr3R 8090511 intergenic CR44330 + chr3R_13_8090001 chr3R_8090001 RAL-774_125 1968 chr3R 8090520 8090568 chr3R 8094045 8094070 297 8 3512 5.0 11.0 8.0 0.9 3550 chr3R 8090520 intergenic CR44330 + chr3R 8092295 intergenic not near genes chr3R 8094070 intergenic CG7900 + chr3R_8_8090001 chr3R_8090001 RAL-774_125 1969 chr3R 8094373 8094419 chr3R 8099728 8099774 Transpac 7 5355 6.5 2.0 4.2 1.3 5401 chr3R 8094373 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099774 intron CG7900 + chr3R_7_8095001 chr3R_8095001 RAL-774_125 1970 chr3R 8101738 8101782 chr3R 8104872 8104911 G2 6 3127 5.5 3.5 4.5 1.1 3173 chr3R 8101738 exon CG7900 + chr3R 8103324 intron CG7900 + chr3R 8104911 3` UTR CG7900 + chr3R_6_8100001 chr3R_8100001 RAL-774_125 1971 chr3R 8207517 8207577 chr3R 8208401 8208472 F-element 17 881 2.5 1.5 2.0 5.7 955 chr3R 8207517 intergenic not near genes chr3R 8207994 intergenic not near genes chr3R 8208472 intergenic not near genes chr3R_17_8205001 chr3R_8205001 RAL-774_125 1972 chr3R 8339246 8339247 chr3R 21907534 21907536 8 13568288 16.5 22.0 19.2 0.4 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_8_15120001 chr3R_15120001 RAL-774_125 1973 chr3R 8402977 8403020 chr3R 8412191 8412216 roo 6 9206 5.5 4.5 5.0 1.0 9239 chr3R 8402977 intron CG45263 - chr3R 8407596 intron CG45263 - chr3R 8412216 intron CG45263 - chr3R_6_8405001 chr3R_8405001 RAL-774_125 1974 chr3R 8478033 8478105 chr3R 8478163 8478235 10 124 4.5 6.5 5.5 1.5 202 chr3R 8478033 intergenic CG45263 - chr3R 8478134 intergenic not near genes chr3R 8478235 intergenic not near genes chr3R_10_8475001 chr3R_8475001 RAL-774_125 1975 chr3R 8539956 8540020 chr3R 8540117 8540181 21 157 7.0 5.0 6.0 3.0 225 chr3R 8539956 intergenic not near genes chr3R 8540068 intergenic not near genes chr3R 8540181 intergenic not near genes chr3R_21_8540001 chr3R_8540001 RAL-774_125 1976 chr3R 8570451 8570501 chr3R 8575132 8575172 HMS-Beagle 12 4672 4.5 5.5 5.0 2.0 4721 chr3R 8570451 intergenic not near genes chr3R 8572812 intergenic not near genes chr3R 8575172 intergenic not near genes chr3R_12_8570001 chr3R_8570001 RAL-774_125 1977 chr3R 8598816 8598881 chr3R 8598935 8598977 13 119 5.0 2.0 3.5 2.9 161 chr3R 8598816 intron 5-HT2B + chr3R 8598896 intron 5-HT2B + chr3R 8598977 intron 5-HT2B + chr3R_13_8595001 chr3R_8595001 RAL-774_125 1978 chr3R 8601729 8601786 chr3R 8610931 8610958 roo 12 9192 3.5 4.0 3.8 2.5 9229 chr3R 8601729 intron 5-HT2B + chr3R 8606344 intron 5-HT2B + chr3R 8610958 intron 5-HT2B + chr3R_12_8605001 chr3R_8605001 RAL-774_125 1979 chr3R 8636910 8636958 chr3R 8637263 8637311 12 352 3.0 8.0 5.5 1.8 401 chr3R 8636910 intergenic not near genes chr3R 8637110 intergenic not near genes chr3R 8637311 intergenic not near genes chr3R_12_8635001 chr3R_8635001 RAL-774_125 1980 chr3R 8685267 8685315 chr3R 8685411 8685465 6 148 4.0 5.5 4.8 1.0 198 chr3R 8685267 intron CR44937 - chr3R 8685366 intron CR44937 - chr3R 8685465 intron CR44937 - chr3R_6_8685001 chr3R_8685001 RAL-774_125 1981 chr3R 8707316 8707380 chr3R 8709802 8709849 jockey 6 2484 3.0 1.5 2.2 1.9 2533 chr3R 8707316 intergenic not near genes chr3R 8708582 intergenic not near genes chr3R 8709849 intergenic not near genes chr3R_6_8705001 chr3R_8705001 RAL-774_125 1982 chr3R 8740199 8740243 chr3R 8740332 8740348 7 123 2.0 8.5 5.2 1.1 149 chr3R 8740199 intron CG9801 - chr3R 8740274 intron CG9801 - chr3R 8740348 intron CG9801 - chr3R_7_8740001 chr3R_8740001 RAL-774_125 1983 chr3R 8798602 8798675 chr3R 8798736 8798808 12 128 5.0 7.0 6.0 1.7 206 chr3R 8798602 intron,intron Pif1A -,Pif1B - chr3R 8798705 intron,intron Pif1A -,Pif1B - chr3R 8798808 intron,intron Pif1A -,Pif1B - chr3R_12_8795001 chr3R_8795001 RAL-774_125 1984 chr3R 8875516 8875563 chr3R 8875619 8875690 8 117 5.0 1.5 3.2 1.9 174 chr3R 8875516 intron pyd - chr3R 8875603 intron pyd - chr3R 8875690 intron pyd - chr3R_8_8875001 chr3R_8875001 RAL-774_125 1985 chr3R 8877129 8877186 chr3R 8877260 8877317 14 128 3.0 4.0 3.5 3.1 188 chr3R 8877129 intron pyd - chr3R 8877223 intron pyd - chr3R 8877317 intron pyd - chr3R_14_8875001 chr3R_8875001 RAL-774_125 1986 chr3R 8898188 8898206 chr3R 8913818 8913836 297 8 15629 15.5 7.0 11.2 0.7 15648 chr3R 8898188 intron pyd - chr3R 8906012 intron pyd - chr3R 8913836 intron pyd - chr3R_8_8905001 chr3R_8905001 RAL-774_125 1987 chr3R 8917854 8917869 chr3R 8917984 8917989 7 126 9.5 3.5 6.5 0.9 135 chr3R 8917854 intron pyd - chr3R 8917922 intron pyd - chr3R 8917989 intron pyd - chr3R_7_8915001 chr3R_8915001 RAL-774_125 1988 chr3R 8917873 8917903 chr3R 8917981 8918033 10 125 4.5 3.5 4.0 2.0 160 chr3R 8917873 intron pyd - chr3R 8917953 intron pyd - chr3R 8918033 intron pyd - chr3R_10_8915001 chr3R_8915001 RAL-774_125 1989 chr3R 9007929 9008002 chr3R 9008068 9008141 9 138 3.0 3.5 3.2 2.1 212 chr3R 9007929 3` UTR CG11982 + chr3R 9008035 intergenic CG11982 +,CG11983 + chr3R 9008141 intergenic CG11982 +,CG11983 + chr3R_9_9005001 chr3R_9005001 RAL-774_125 1990 chr3R 9036670 9036730 chr3R 9036816 9036869 9 144 5.5 5.0 5.2 1.5 199 chr3R 9036670 intron neur - chr3R 9036770 intron neur - chr3R 9036869 intron neur - chr3R_9_9035001 chr3R_9035001 RAL-774_125 1991 chr3R 9067390 9067452 chr3R 9067520 9067582 9 129 7.0 5.0 6.0 1.3 192 chr3R 9067390 3` UTR pum - chr3R 9067486 3` UTR pum - chr3R 9067582 3` UTR pum - chr3R_9_9065001 chr3R_9065001 RAL-774_125 1992 chr3R 9081997 9082030 chr3R 9082140 9082162 4 136 13.0 4.0 8.5 0.4 165 chr3R 9081997 intron pum - chr3R 9082080 intron pum - chr3R 9082162 intron pum - chr3R_4_9080001 chr3R_9080001 RAL-774_125 1993 chr3R 9082032 9082072 chr3R 9082138 9082197 8 133 5.5 4.0 4.8 1.4 165 chr3R 9082032 intron pum - chr3R 9082114 intron pum - chr3R 9082197 intron pum - chr3R_8_9080001 chr3R_9080001 RAL-774_125 1994 chr3R 9101806 9101863 chr3R 9101954 9102011 9 146 1.0 4.5 2.8 2.4 205 chr3R 9101806 intron pum - chr3R 9101908 intron pum - chr3R 9102011 intron pum - chr3R_9_9100001 chr3R_9100001 RAL-774_125 1995 chr3R 9108816 9108884 chr3R 9108942 9109010 16 124 3.5 1.0 2.2 5.0 194 chr3R 9108816 intron pum - chr3R 9108913 intron pum - chr3R 9109010 intron pum - chr3R_16_9105001 chr3R_9105001 RAL-774_125 1996 chr3R 9192014 9192049 chr3R 9192148 9192172 7 133 3.0 5.5 4.2 1.3 158 chr3R 9192014 intron pum - chr3R 9192093 intron pum - chr3R 9192172 intron pum - chr3R_7_9190001 chr3R_9190001 RAL-774_125 1997 chr3R 9204219 9204278 chr3R 9204341 9204399 14 128 4.5 4.0 4.2 2.7 180 chr3R 9204219 intron pum - chr3R 9204309 intron pum - chr3R 9204399 intron pum - chr3R_14_9200001 chr3R_9200001 RAL-774_125 1998 chr3R 9251402 9251450 chr3R 9251532 9251569 15 128 4.0 2.5 3.2 3.6 167 chr3R 9251402 3` UTR CG8420 + chr3R 9251486 intergenic CG8420 +,St2 + chr3R 9251569 intergenic CG8420 +,St2 + chr3R_15_9250001 chr3R_9250001 RAL-774_125 1999 chr3R 9319536 9319596 chr3R 9320021 9320081 jockey 15 483 3.5 3.5 3.5 3.3 545 chr3R 9319536 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320081 intron CG8861 - chr3R_15_9315001 chr3R_9315001 RAL-774_125 2000 chr3R 9382775 9382779 chr3R 9382950 9382954 4 175 7.5 6.0 6.8 0.5 179 chr3R 9382775 intron FER - chr3R 9382864 intron FER - chr3R 9382954 intron FER - chr3R_4_9380001 chr3R_9380001 RAL-774_125 2001 chr3R 9382792 9382838 chr3R 9382942 9383013 7 166 2.5 5.5 4.0 1.4 221 chr3R 9382792 intron FER - chr3R 9382902 intron FER - chr3R 9383013 intron FER - chr3R_7_9380001 chr3R_9380001 RAL-774_125 2002 chr3R 9447441 9447458 chr3R 9447569 9447606 5 148 2.5 4.5 3.5 1.1 165 chr3R 9447441 intron ps + chr3R 9447524 intron ps + chr3R 9447606 intron ps + chr3R_5_9445001 chr3R_9445001 RAL-774_125 2003 chr3R 9611853 9611863 chr3R 9611960 9611995 5 126 5.0 0.0 2.5 1.4 142 chr3R 9611853 intron CG8312 + chr3R 9611924 intron CG8312 + chr3R 9611995 intron CG8312 + chr3R_5_9610001 chr3R_9610001 RAL-774_125 2004 chr3R 9668638 9668698 chr3R 9668761 9668826 11 125 2.0 4.5 3.2 2.6 188 chr3R 9668638 intron CG9492 - chr3R 9668732 intron CG9492 - chr3R 9668826 intron CG9492 - chr3R_11_9665001 chr3R_9665001 RAL-774_125 2005 chr3R 9699957 9699998 chr3R 9700091 9700136 1360 11 135 6.5 6.0 6.2 1.5 179 chr3R 9699957 intron Unc-115a - chr3R 9700046 intron Unc-115a - chr3R 9700136 intron Unc-115a - chr3R_11_9700001 chr3R_9700001 RAL-774_125 2006 chr3R 9836857 9836893 chr3R 9836965 9837031 8 122 6.0 7.0 6.5 1.1 174 chr3R 9836857 intron Teh1 - chr3R 9836944 intron Teh1 - chr3R 9837031 intron Teh1 - chr3R_8_9835001 chr3R_9835001 RAL-774_125 2007 chr3R 9874124 9874196 chr3R 9874252 9874324 11 121 3.5 6.0 4.8 1.9 200 chr3R 9874124 intergenic not near genes chr3R 9874224 intergenic Glut4EF + chr3R 9874324 intergenic Glut4EF + chr3R_11_9870001 chr3R_9870001 RAL-774_125 2008 chr3R 9898739 9898805 chr3R 9898881 9898942 18 140 6.0 5.0 5.5 2.8 203 chr3R 9898739 intron Glut4EF + chr3R 9898840 intron Glut4EF + chr3R 9898942 intron Glut4EF + chr3R_18_9895001 chr3R_9895001 RAL-774_125 2009 chr3R 10090543 10090599 chr3R 10090693 10090749 15 149 5.5 5.5 5.5 2.3 206 chr3R 10090543 intergenic CR45054 + chr3R 10090646 intergenic CR45054 +,mir-317 + chr3R 10090749 intergenic CR45054 +,mir-317 + chr3R_15_10090001 chr3R_10090001 RAL-774_125 2010 chr3R 10178222 10178232 chr3R 10178344 10178350 4 123 7.5 6.5 7.0 0.5 128 chr3R 10178222 intron CG12814 - chr3R 10178286 intron CG12814 - chr3R 10178350 intron CG12814 - chr3R_4_10175001 chr3R_10175001 RAL-774_125 2011 chr3R 10183054 10183100 chr3R 10183181 10183207 10 122 4.5 3.0 3.8 2.1 153 chr3R 10183054 intron CG12814 - chr3R 10183130 intron CG12814 - chr3R 10183207 intron CG12814 - chr3R_10_10180001 chr3R_10180001 RAL-774_125 2012 chr3R 10231766 10231805 chr3R 10237358 10237432 mdg3 10 5618 2.5 3.5 3.0 2.5 5666 chr3R 10231766 intron CG42795 + chr3R 10234599 intron CG42795 + chr3R 10237432 intron CG42795 + chr3R_10_10230001 chr3R_10230001 RAL-774_125 2013 chr3R 10255341 10255379 chr3R 10260825 10260852 I-element 10 5485 5.0 5.0 5.0 1.7 5511 chr3R 10255341 intergenic Sirt6 -,CG3999 + chr3R 10258096 intron Sirt6 - chr3R 10260852 exon Sirt6 - chr3R_10_10255001 chr3R_10255001 RAL-774_125 2014 chr3R 10420645 10420653 chr3R 10420771 10420779 4 126 3.0 7.5 5.2 0.6 134 chr3R 10420645 intergenic not near genes chr3R 10420712 intergenic not near genes chr3R 10420779 intergenic not near genes chr3R_4_10420001 chr3R_10420001 RAL-774_125 2015 chr3R 10474727 10474780 chr3R 10474863 10474933 16 145 3.5 1.5 2.5 4.6 206 chr3R 10474727 intergenic not near genes chr3R 10474830 intergenic not near genes chr3R 10474933 intergenic not near genes chr3R_16_10470001 chr3R_10470001 RAL-774_125 2016 chr3R 10492599 10492673 chr3R 10492729 10492808 17 127 2.0 1.5 1.8 6.1 209 chr3R 10492599 intergenic not near genes chr3R 10492704 intergenic not near genes chr3R 10492808 intergenic not near genes chr3R_17_10490001 chr3R_10490001 RAL-774_125 2017 chr3R 10531844 10531870 chr3R 10531948 10532001 5 120 4.5 1.5 3.0 1.2 157 chr3R 10531844 intron hth - chr3R 10531922 intron hth - chr3R 10532001 intron hth - chr3R_5_10530001 chr3R_10530001 RAL-774_125 2018 chr3R 10561756 10561820 chr3R 10561896 10561960 14 124 7.0 3.5 5.2 2.3 204 chr3R 10561756 intron hth - chr3R 10561858 intron hth - chr3R 10561960 exon hth - chr3R_14_10560001 chr3R_10560001 RAL-774_125 2019 chr3R 10594556 10594602 chr3R 10594685 10594737 9 130 6.0 3.5 4.8 1.6 181 chr3R 10594556 intron hth - chr3R 10594646 intron hth - chr3R 10594737 intron hth - chr3R_9_10590001 chr3R_10590001 RAL-774_125 2020 chr3R 10724692 10724697 chr3R 10724889 10724889 5 199 2.0 8.5 5.2 0.8 197 chr3R 10724692 intergenic not near genes chr3R 10724790 intergenic not near genes chr3R 10724889 intergenic not near genes chr3R_5_10720001 chr3R_10720001 RAL-774_125 2021 chr3R 10777840 10777897 chr3R 10777972 10778027 14 131 7.0 3.5 5.2 2.3 187 chr3R 10777840 intergenic CG45076 -,fau -,CG45078 - chr3R 10777934 intergenic not near genes chr3R 10778027 intergenic not near genes chr3R_14_10775001 chr3R_10775001 RAL-774_125 2022 chr3R 10785769 10785827 chr3R 10785898 10785956 11 127 3.5 5.0 4.2 2.1 187 chr3R 10785769 intron Rbp1 + chr3R 10785862 intron Rbp1 + chr3R 10785956 intron Rbp1 + chr3R_11_10785001 chr3R_10785001 RAL-774_125 2023 chr3R 10804144 10804180 chr3R 10811726 10811762 17.6 5 7581 1.0 4.5 2.8 1.3 7618 chr3R 10804144 intergenic CG14692 - chr3R 10807953 intergenic not near genes chr3R 10811762 3` UTR CG14693 - chr3R_5_10805001 chr3R_10805001 RAL-774_125 2024 chr3R 10862847 10862905 chr3R 10862972 10863036 8 128 5.5 3.0 4.2 1.5 189 chr3R 10862847 5` UTR CG6574 - chr3R 10862942 5` UTR CG6574 - chr3R 10863036 intergenic CG6574 -,SelR - chr3R_8_10860001 chr3R_10860001 RAL-774_125 2025 chr3R 10868583 10868621 chr3R 10868671 10868711 7 88 5.0 6.5 5.8 1.0 128 chr3R 10868583 5` UTR SelR - chr3R 10868647 intergenic SelR -,Tsp86D + chr3R 10868711 5` UTR Tsp86D + chr3R_7_10865001 chr3R_10865001 RAL-774_125 2026 chr3R 10919658 10919718 chr3R 10919781 10919841 14 125 4.5 6.5 5.5 2.2 183 chr3R 10919658 intergenic not near genes chr3R 10919750 intergenic not near genes chr3R 10919841 intergenic not near genes chr3R_14_10915001 chr3R_10915001 RAL-774_125 2027 chr3R 10920017 10920064 chr3R 10920140 10920182 7 122 2.5 4.0 3.2 1.7 165 chr3R 10920017 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920182 intergenic not near genes chr3R_7_10920001 chr3R_10920001 RAL-774_125 2028 chr3R 10924701 10924774 chr3R 10924842 10924910 14 138 3.0 3.5 3.2 3.3 209 chr3R 10924701 intergenic not near genes chr3R 10924806 intergenic not near genes chr3R 10924910 intergenic not near genes chr3R_14_10920001 chr3R_10920001 RAL-774_125 2029 chr3R 10957840 10957884 chr3R 10963264 10963276 Rt1c 9 5412 4.5 1.5 3.0 2.2 5436 chr3R 10957840 intergenic not near genes chr3R 10960558 intergenic not near genes chr3R 10963276 intergenic not near genes chr3R_9_10960001 chr3R_10960001 RAL-774_125 2030 chr3R 11220279 11220296 chr3R 11220443 11220460 4 166 18.0 17.0 17.5 0.2 181 chr3R 11220279 3` UTR CG6693 - chr3R 11220370 3` UTR CG6693 - chr3R 11220460 3` UTR CG6693 - chr3R_4_11220001 chr3R_11220001 RAL-774_125 2031 chr3R 11265898 11265918 chr3R 11266015 11266044 5 121 1.5 4.5 3.0 1.2 146 chr3R 11265898 intergenic not near genes chr3R 11265971 intergenic not near genes chr3R 11266044 intergenic not near genes chr3R_5_11265001 chr3R_11265001 RAL-774_125 2032 chr3R 11294421 11294490 chr3R 11294782 11294840 18 358 3.5 6.5 5.0 3.0 419 chr3R 11294421 intron CR31386 - chr3R 11294630 intron CR31386 - chr3R 11294840 intron CR31386 - chr3R_18_11290001 chr3R_11290001 RAL-774_125 2033 chr3R 11307169 11307209 chr3R 11307286 11307346 4 122 3.0 3.5 3.2 1.0 177 chr3R 11307169 intergenic not near genes chr3R 11307258 intergenic not near genes chr3R 11307346 intergenic not near genes chr3R_4_11305001 chr3R_11305001 RAL-774_125 2034 chr3R 11545841 11545905 chr3R 11546008 11546072 12 166 1.0 2.0 1.5 4.8 231 chr3R 11545841 intergenic not near genes chr3R 11545956 intergenic not near genes chr3R 11546072 intergenic not near genes chr3R_12_11545001 chr3R_11545001 RAL-774_125 2035 chr3R 11684325 11684394 chr3R 11684567 11684642 19 242 6.0 0.0 3.0 4.8 317 chr3R 11684325 5` UTR CG6830 - chr3R 11684484 intergenic CG6830 -,CG6834 - chr3R 11684642 intergenic CG6834 -,CG6830 - chr3R_19_11680001 chr3R_11680001 RAL-774_125 2036 chr3R 11684590 11684607 chr3R 11687765 11687782 4 3171 0.0 4.0 2.0 1.3 3192 chr3R 11684590 intergenic CG6834 -,CG6830 - chr3R 11686186 exon CG6834 - chr3R 11687782 exon CG6834 - chr3R_4_11685001 chr3R_11685001 RAL-774_125 2037 chr3R 11684611 11684667 chr3R 11687763 11687809 8 3158 0.0 4.0 2.0 2.7 3198 chr3R 11684611 intergenic CG6834 -,CG6830 - chr3R 11686210 exon CG6834 - chr3R 11687809 exon CG6834 - chr3R_8_11685001 chr3R_11685001 RAL-774_125 2038 chr3R 11698097 11698171 chr3R 11698224 11698285 19 124 4.5 5.0 4.8 3.3 188 chr3R 11698097 3` UTR CG14717 + chr3R 11698191 3` UTR CG14717 + chr3R 11698285 3` UTR CG14717 + chr3R_19_11695001 chr3R_11695001 RAL-774_125 2039 chr3R 11710176 11710228 chr3R 11710299 11710336 14 123 4.0 4.0 4.0 2.8 160 chr3R 11710176 intergenic not near genes chr3R 11710256 intergenic not near genes chr3R 11710336 intergenic not near genes chr3R_14_11710001 chr3R_11710001 RAL-774_125 2040 chr3R 11734140 11734178 chr3R 11734284 11734311 7 151 2.0 2.0 2.0 2.3 171 chr3R 11734140 intergenic not near genes chr3R 11734226 intergenic not near genes chr3R 11734311 intergenic not near genes chr3R_7_11730001 chr3R_11730001 RAL-774_125 2041 chr3R 11830306 11830339 chr3R 11830439 11830473 5 133 4.5 2.5 3.5 1.1 167 chr3R 11830306 intron CG6959 - chr3R 11830390 intron CG6959 - chr3R 11830473 intron CG6959 - chr3R_5_11830001 chr3R_11830001 RAL-774_125 2042 chr3R 11841032 11841086 chr3R 11846256 11846327 BS 16 5234 8.0 5.0 6.5 2.1 5295 chr3R 11841032 intron CG6959 - chr3R 11843680 intron CG6959 - chr3R 11846327 intron CG6959 - chr3R_16_11840001 chr3R_11840001 RAL-774_125 2043 chr3R 11853409 11853464 chr3R 11853600 11853661 12 197 2.0 8.5 5.2 1.9 252 chr3R 11853409 intron CG6959 - chr3R 11853535 intron CG6959 - chr3R 11853661 intron CG6959 - chr3R_12_11850001 chr3R_11850001 RAL-774_125 2044 chr3R 11853727 11853791 chr3R 11853881 11853946 17 153 4.5 8.0 6.2 2.4 219 chr3R 11853727 intron CG6959 - chr3R 11853836 intron CG6959 - chr3R 11853946 intron CG6959 - chr3R_17_11850001 chr3R_11850001 RAL-774_125 2045 chr3R 11865272 11865324 chr3R 11865385 11865430 7 120 4.5 6.0 5.2 1.1 158 chr3R 11865272 intron CG6959 - chr3R 11865351 intron CG6959 - chr3R 11865430 intron CG6959 - chr3R_7_11865001 chr3R_11865001 RAL-774_125 2046 chr3R 11869895 11869975 chr3R 11870024 11870038 18 122 6.0 5.5 5.8 2.6 143 chr3R 11869895 intergenic CG6959 - chr3R 11869966 intergenic not near genes chr3R 11870038 intergenic not near genes chr3R_18_11865001 chr3R_11865001 RAL-774_125 2047 chr3R 12058644 12058704 chr3R 12059127 12059198 7 492 2.5 1.0 1.8 2.5 554 chr3R 12058644 intergenic not near genes chr3R 12058921 intergenic not near genes chr3R 12059198 intergenic not near genes chr3R_7_12055001 chr3R_12055001 RAL-774_125 2048 chr3R 12066055 12066099 chr3R 12066186 12066230 8 131 5.5 7.5 6.5 1.1 175 chr3R 12066055 intergenic not near genes chr3R 12066142 intergenic not near genes chr3R 12066230 intergenic not near genes chr3R_8_12065001 chr3R_12065001 RAL-774_125 2049 chr3R 12073905 12073976 chr3R 12074043 12074105 11 136 0.5 2.0 1.2 5.0 200 chr3R 12073905 intron CG14741 - chr3R 12074005 intron CG14741 - chr3R 12074105 intron CG14741 - chr3R_11_12070001 chr3R_12070001 RAL-774_125 2050 chr3R 12088043 12088307 chr3R 12088175 12088441 17 135 2.5 1.0 1.8 6.1 398 chr3R 12088043 intron CG14741 - chr3R 12088242 intron CG14741 - chr3R 12088441 intron CG14741 - chr3R_17_12085001 chr3R_12085001 RAL-774_125 2051 chr3R 12102847 12102869 chr3R 12102973 12103020 5 134 3.5 6.0 4.8 0.9 173 chr3R 12102847 intron dpr17 + chr3R 12102934 intron dpr17 + chr3R 12103020 intron dpr17 + chr3R_5_12100001 chr3R_12100001 RAL-774_125 2052 chr3R 12143521 12143575 chr3R 12143648 12143715 10 137 2.5 3.5 3.0 2.5 194 chr3R 12143521 exon dpr15 - chr3R 12143618 intron dpr15 - chr3R 12143715 intron dpr15 - chr3R_10_12140001 chr3R_12140001 RAL-774_125 2053 chr3R 12165824 12165892 chr3R 12165952 12166019 9 127 3.0 4.0 3.5 2.0 195 chr3R 12165824 intron Cpn - chr3R 12165922 intron Cpn - chr3R 12166019 intron Cpn - chr3R_9_12165001 chr3R_12165001 RAL-774_125 2054 chr3R 12169188 12169216 chr3R 12169316 12169339 5 125 7.0 2.5 4.8 0.9 151 chr3R 12169188 intergenic not near genes chr3R 12169264 intergenic not near genes chr3R 12169339 intergenic not near genes chr3R_5_12165001 chr3R_12165001 RAL-774_125 2055 chr3R 12175434 12175482 chr3R 12175562 12175611 9 125 3.0 5.0 4.0 1.8 177 chr3R 12175434 intergenic not near genes chr3R 12175522 intergenic not near genes chr3R 12175611 intergenic not near genes chr3R_9_12175001 chr3R_12175001 RAL-774_125 2056 chr3R 12267812 12267881 chr3R 12267942 12268011 12 130 4.0 4.5 4.2 2.3 199 chr3R 12267812 intron svp + chr3R 12267912 intron svp + chr3R 12268011 intron svp + chr3R_12_12265001 chr3R_12265001 RAL-774_125 2057 chr3R 12344110 12344141 chr3R 12344222 12344266 4 121 6.0 9.0 7.5 0.5 156 chr3R 12344110 intergenic not near genes chr3R 12344188 intergenic not near genes chr3R 12344266 intergenic not near genes chr3R_4_12340001 chr3R_12340001 RAL-774_125 2058 chr3R 12392844 12392895 chr3R 12392994 12393039 13 147 3.5 3.0 3.2 3.1 195 chr3R 12392844 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392942 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393039 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_13_12390001 chr3R_12390001 RAL-774_125 2059 chr3R 12546418 12546473 chr3R 12546546 12546583 10 129 4.5 2.5 3.5 2.2 165 chr3R 12546418 intron Octbeta3R - chr3R 12546500 intron Octbeta3R - chr3R 12546583 intron Octbeta3R - chr3R_10_12545001 chr3R_12545001 RAL-774_125 2060 chr3R 12602369 12602416 chr3R 12602497 12602534 8 122 5.0 5.5 5.2 1.3 165 chr3R 12602369 intergenic not near genes chr3R 12602452 intergenic not near genes chr3R 12602534 intergenic not near genes chr3R_8_12600001 chr3R_12600001 RAL-774_125 2061 chr3R 12644718 12644770 chr3R 12644823 12644897 12 124 7.5 6.5 7.0 1.5 179 chr3R 12644718 intergenic not near genes chr3R 12644808 intergenic not near genes chr3R 12644897 intergenic not near genes chr3R_12_12640001 chr3R_12640001 RAL-774_125 2062 chr3R 12735131 12735177 chr3R 12735431 12735475 9 299 3.0 3.0 3.0 2.2 344 chr3R 12735131 intergenic not near genes chr3R 12735303 intergenic not near genes chr3R 12735475 intergenic not near genes chr3R_9_12735001 chr3R_12735001 RAL-774_125 2063 chr3R 12805827 12805872 chr3R 12805947 12806008 11 131 2.5 3.5 3.0 2.8 181 chr3R 12805827 intergenic not near genes chr3R 12805918 intergenic not near genes chr3R 12806008 intergenic not near genes chr3R_11_12805001 chr3R_12805001 RAL-774_125 2064 chr3R 12818982 12819046 chr3R 12819109 12819180 8 131 1.5 2.0 1.8 2.9 198 chr3R 12818982 intergenic not near genes chr3R 12819081 intergenic not near genes chr3R 12819180 intergenic not near genes chr3R_8_12815001 chr3R_12815001 RAL-774_125 2065 chr3R 12825787 12825848 chr3R 12825910 12825958 10 125 5.0 5.5 5.2 1.6 171 chr3R 12825787 intergenic not near genes chr3R 12825872 intergenic not near genes chr3R 12825958 intergenic not near genes chr3R_10_12825001 chr3R_12825001 RAL-774_125 2066 chr3R 12876936 12876972 chr3R 12877069 12877105 6 133 3.0 3.5 3.2 1.4 169 chr3R 12876936 intergenic not near genes chr3R 12877020 intergenic not near genes chr3R 12877105 intergenic not near genes chr3R_6_12875001 chr3R_12875001 RAL-774_125 2067 chr3R 12920123 12920176 chr3R 12925366 12925416 copia 12 5245 3.5 2.5 3.0 3.0 5293 chr3R 12920123 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925416 intron beat-Vb + chr3R_12_12920001 chr3R_12920001 RAL-774_125 2068 chr3R 13059916 13059964 chr3R 13060161 13060209 9 245 4.0 3.5 3.8 1.9 293 chr3R 13059916 intron sim + chr3R 13060062 intron sim + chr3R 13060209 intron sim + chr3R_9_13060001 chr3R_13060001 RAL-774_125 2069 chr3R 13061837 13061887 chr3R 13061982 13062032 8 144 7.5 4.0 5.8 1.2 195 chr3R 13061837 intron sim + chr3R 13061934 intron sim + chr3R 13062032 intron sim + chr3R_8_13060001 chr3R_13060001 RAL-774_125 2070 chr3R 13066987 13067006 chr3R 13067124 13067137 6 136 5.5 6.0 5.8 0.9 150 chr3R 13066987 intron sim + chr3R 13067062 intron sim + chr3R 13067137 intron sim + chr3R_6_13065001 chr3R_13065001 RAL-774_125 2071 chr3R 13075319 13075371 chr3R 13075450 13075502 5 128 2.5 3.5 3.0 1.2 183 chr3R 13075319 intron sim + chr3R 13075410 intron sim + chr3R 13075502 intron sim + chr3R_5_13075001 chr3R_13075001 RAL-774_125 2072 chr3R 13120742 13120794 chr3R 13120852 13120921 13 117 6.0 4.5 5.2 2.1 179 chr3R 13120742 intron timeout + chr3R 13120832 intron timeout + chr3R 13120921 intron timeout + chr3R_13_13120001 chr3R_13120001 RAL-774_125 2073 chr3R 13135800 13135826 chr3R 13138015 13138051 pogo 5 2222 7.0 1.0 4.0 1.0 2251 chr3R 13135800 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136926 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138051 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13135001 chr3R_13135001 RAL-774_125 2074 chr3R 13142999 13143063 chr3R 13148619 13148678 mdg3 13 5614 5.5 4.5 5.0 2.2 5679 chr3R 13142999 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145838 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148678 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_13_13145001 chr3R_13145001 RAL-774_125 2075 chr3R 13194154 13194214 chr3R 13195031 13195070 12 868 3.5 3.5 3.5 2.7 916 chr3R 13194154 intergenic not near genes chr3R 13194612 intergenic not near genes chr3R 13195070 intergenic not near genes chr3R_12_13190001 chr3R_13190001 RAL-774_125 2076 chr3R 13195929 13195970 chr3R 13196073 13196114 7 137 7.0 3.0 5.0 1.2 185 chr3R 13195929 intergenic not near genes chr3R 13196022 intergenic not near genes chr3R 13196114 intergenic not near genes chr3R_7_13195001 chr3R_13195001 RAL-774_125 2077 chr3R 13241346 13241412 chr3R 13241550 13241616 9 201 3.5 3.5 3.5 2.0 270 chr3R 13241346 intron Ace - chr3R 13241481 intron Ace - chr3R 13241616 intron Ace - chr3R_9_13240001 chr3R_13240001 RAL-774_125 2078 chr3R 13249565 13249585 chr3R 13249729 13249749 5 164 3.0 0.5 1.8 1.8 184 chr3R 13249565 intron Ace - chr3R 13249657 intron Ace - chr3R 13249749 intron Ace - chr3R_5_13245001 chr3R_13245001 RAL-774_125 2079 chr3R 13311551 13311588 chr3R 13318883 13318909 Doc 6 7330 14.5 0.5 7.5 0.7 7358 chr3R 13311551 exon CG32473 + chr3R 13315230 intergenic not near genes chr3R 13318909 intergenic CG45080 - chr3R_6_13315001 chr3R_13315001 RAL-774_125 2080 chr3R 13328467 13328480 chr3R 13328579 13328630 5 131 1.5 7.0 4.2 1.0 163 chr3R 13328467 intergenic not near genes chr3R 13328548 intergenic not near genes chr3R 13328630 intergenic PK2-R2 - chr3R_5_13325001 chr3R_13325001 RAL-774_125 2081 chr3R 13378810 13378862 chr3R 13378950 13379003 11 137 2.0 2.5 2.2 3.4 193 chr3R 13378810 intron CG9813 - chr3R 13378906 intron CG9813 - chr3R 13379003 exon CG9813 - chr3R_11_13375001 chr3R_13375001 RAL-774_125 2082 chr3R 13413703 13413776 chr3R 13413851 13413920 7 146 3.0 1.0 2.0 2.3 217 chr3R 13413703 intron yellow-e - chr3R 13413812 intron yellow-e - chr3R 13413920 intron yellow-e - chr3R_7_13410001 chr3R_13410001 RAL-774_125 2083 chr3R 13435347 13435410 chr3R 13435567 13435635 13 221 1.5 5.0 3.2 3.1 288 chr3R 13435347 intergenic yrt - chr3R 13435491 intergenic not near genes chr3R 13435635 intergenic not near genes chr3R_13_13435001 chr3R_13435001 RAL-774_125 2084 chr3R 13439542 13439595 chr3R 13439673 13439720 9 128 1.5 3.0 2.2 2.8 178 chr3R 13439542 intergenic CR42756 - chr3R 13439631 intergenic CR42756 - chr3R 13439720 intergenic not near genes chr3R_9_13435001 chr3R_13435001 RAL-774_125 2085 chr3R 13456353 13456382 chr3R 13456492 13456521 8 138 6.5 6.5 6.5 1.1 168 chr3R 13456353 intron,intron CG14372 +,CR17025 - chr3R 13456437 intron,intron CG14372 +,CR17025 - chr3R 13456521 intron,intron CG14372 +,CR17025 - chr3R_8_13455001 chr3R_13455001 RAL-774_125 2086 chr3R 13470806 13470878 chr3R 13471185 13471257 7 372 1.5 0.5 1.0 3.5 451 chr3R 13470806 intergenic not near genes chr3R 13471032 intergenic not near genes chr3R 13471257 intergenic not near genes chr3R_7_13470001 chr3R_13470001 RAL-774_125 2087 chr3R 13505849 13505866 chr3R 13505935 13505980 6 114 4.5 3.0 3.8 1.2 131 chr3R 13505849 intergenic not near genes chr3R 13505914 intergenic not near genes chr3R 13505980 intergenic not near genes chr3R_6_13505001 chr3R_13505001 RAL-774_125 2088 chr3R 13580820 13580826 chr3R 13580937 13580953 6 124 8.0 10.0 9.0 0.6 133 chr3R 13580820 intergenic not near genes chr3R 13580886 intergenic not near genes chr3R 13580953 intergenic not near genes chr3R_6_13580001 chr3R_13580001 RAL-774_125 2089 chr3R 13598036 13598115 chr3R 13598164 13598208 13 120 7.5 4.5 6.0 1.9 172 chr3R 13598036 intergenic not near genes chr3R 13598122 intergenic not near genes chr3R 13598208 intergenic not near genes chr3R_13_13595001 chr3R_13595001 RAL-774_125 2090 chr3R 13603026 13603075 chr3R 13603167 13603211 13 139 5.0 3.5 4.2 2.5 185 chr3R 13603026 intergenic not near genes chr3R 13603118 intergenic not near genes chr3R 13603211 intergenic not near genes chr3R_13_13600001 chr3R_13600001 RAL-774_125 2091 chr3R 13672909 13672967 chr3R 13673021 13673095 14 126 3.5 5.0 4.2 2.7 186 chr3R 13672909 intron Task6 - chr3R 13673002 intron Task6 - chr3R 13673095 intron Task6 - chr3R_14_13670001 chr3R_13670001 RAL-774_125 2092 chr3R 13693028 13693028 chr3R 21907534 21907536 8 8214507 12.5 22.0 17.2 0.4 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_8_17800001 chr3R_17800001 RAL-774_125 2093 chr3R 13719439 13719482 chr3R 13719992 13720035 9 551 4.5 3.5 4.0 1.8 596 chr3R 13719439 intron CG34383 + chr3R 13719737 intron CG34383 + chr3R 13720035 intron CG34383 + chr3R_9_13715001 chr3R_13715001 RAL-774_125 2094 chr3R 13782032 13782056 chr3R 13782158 13782164 5 119 1.0 2.0 1.5 2.0 132 chr3R 13782032 exon CG9286 + chr3R 13782098 intergenic CG9286 +,Dip-B + chr3R 13782164 intergenic CG9286 +,Dip-B + chr3R_5_13780001 chr3R_13780001 RAL-774_125 2095 chr3R 13863644 13863699 chr3R 13863782 13863831 10 134 4.5 7.5 6.0 1.4 187 chr3R 13863644 intergenic not near genes chr3R 13863738 intergenic not near genes chr3R 13863831 intergenic not near genes chr3R_10_13860001 chr3R_13860001 RAL-774_125 2096 chr3R 13880497 13880561 chr3R 13880667 13880727 14 159 1.0 2.5 1.8 5.0 230 chr3R 13880497 intergenic not near genes chr3R 13880612 intergenic not near genes chr3R 13880727 intergenic not near genes chr3R_14_13880001 chr3R_13880001 RAL-774_125 2097 chr3R 13974475 13974488 chr3R 13974596 13974615 4 125 2.5 5.5 4.0 0.8 140 chr3R 13974475 intron,5` UTR rdx -,CR43460 + chr3R 13974545 intron,5` UTR rdx -,CR43460 + chr3R 13974615 intron,5` UTR rdx -,CR43460 + chr3R_4_13970001 chr3R_13970001 RAL-774_125 2098 chr3R 14021611 14021668 chr3R 14023478 14023532 S-element 11 1865 6.0 4.0 5.0 1.8 1921 chr3R 14021611 intron rdx - chr3R 14022572 intron rdx - chr3R 14023532 intron rdx - chr3R_11_14020001 chr3R_14020001 RAL-774_125 2099 chr3R 14037539 14037586 chr3R 14037665 14037708 12 121 5.0 6.5 5.8 1.8 169 chr3R 14037539 intergenic not near genes chr3R 14037624 intergenic not near genes chr3R 14037708 intergenic not near genes chr3R_12_14035001 chr3R_14035001 RAL-774_125 2100 chr3R 14067092 14067148 chr3R 14067221 14067272 9 127 3.0 1.5 2.2 2.8 180 chr3R 14067092 exon foxo + chr3R 14067182 intron foxo + chr3R 14067272 intron foxo + chr3R_9_14065001 chr3R_14065001 RAL-774_125 2101 chr3R 14099327 14099381 chr3R 14099475 14099520 6 144 6.0 4.5 5.2 1.0 193 chr3R 14099327 intergenic not near genes chr3R 14099424 intergenic PK1-R - chr3R 14099520 intergenic PK1-R - chr3R_6_14095001 chr3R_14095001 RAL-774_125 2102 chr3R 14180769 14180841 chr3R 14185584 14185656 F-element 8 4814 5.0 2.5 3.8 1.7 4887 chr3R 14180769 intron Dop1R1 - chr3R 14183212 intron Dop1R1 - chr3R 14185656 intron Dop1R1 - chr3R_8_14180001 chr3R_14180001 RAL-774_125 2103 chr3R 14194386 14194451 chr3R 14203585 14203650 roo 16 9196 5.0 6.0 5.5 2.5 9264 chr3R 14194386 intron Dop1R1 - chr3R 14199018 intron Dop1R1 - chr3R 14203650 intron Dop1R1 - chr3R_16_14195001 chr3R_14195001 RAL-774_125 2104 chr3R 14246355 14246411 chr3R 14247901 14247956 jockey 13 1531 4.0 3.5 3.8 2.7 1601 chr3R 14246355 intergenic not near genes chr3R 14247156 intergenic not near genes chr3R 14247956 intergenic not near genes chr3R_13_14245001 chr3R_14245001 RAL-774_125 2105 chr3R 14256243 14256316 chr3R 14256391 14256464 14 141 4.0 4.5 4.2 2.7 221 chr3R 14256243 intron,exon Aats-met -,CG43179 + chr3R 14256354 intron,intron Aats-met -,CG43179 + chr3R 14256464 intron,exon Aats-met -,CG43179 + chr3R_14_14255001 chr3R_14255001 RAL-774_125 2106 chr3R 14256737 14256755 chr3R 14256867 14256880 6 133 6.5 8.5 7.5 0.7 143 chr3R 14256737 intron,3` UTR Aats-met -,CG43179 + chr3R 14256808 intron,3` UTR Aats-met -,CG43179 + chr3R 14256880 intron,3` UTR Aats-met -,CG43179 + chr3R_6_14255001 chr3R_14255001 RAL-774_125 2107 chr3R 14382451 14382493 chr3R 14382577 14382620 8 122 7.0 2.5 4.8 1.4 169 chr3R 14382451 intergenic not near genes chr3R 14382536 intergenic not near genes chr3R 14382620 intergenic not near genes chr3R_8_14380001 chr3R_14380001 RAL-774_125 2108 chr3R 14454394 14454465 chr3R 14454531 14454602 15 134 3.0 6.0 4.5 2.7 208 chr3R 14454394 intron cv-c - chr3R 14454498 intron cv-c - chr3R 14454602 intron cv-c - chr3R_15_14450001 chr3R_14450001 RAL-774_125 2109 chr3R 14527363 14527415 chr3R 14527485 14527542 11 116 8.5 4.0 6.2 1.5 179 chr3R 14527363 intron Pde6 - chr3R 14527452 intron Pde6 - chr3R 14527542 intron Pde6 - chr3R_11_14525001 chr3R_14525001 RAL-774_125 2110 chr3R 14535724 14535791 chr3R 14535850 14535882 17 116 4.0 3.5 3.8 3.5 158 chr3R 14535724 intron Pde6 - chr3R 14535803 intron Pde6 - chr3R 14535882 intron Pde6 - chr3R_17_14535001 chr3R_14535001 RAL-774_125 2111 chr3R 14579718 14579736 chr3R 14579849 14579873 5 133 7.5 5.5 6.5 0.7 155 chr3R 14579718 intron stumps + chr3R 14579796 intron stumps + chr3R 14579873 intron stumps + chr3R_5_14575001 chr3R_14575001 RAL-774_125 2112 chr3R 14608445 14608476 chr3R 14608582 14608618 6 141 3.0 7.0 5.0 1.0 173 chr3R 14608445 intergenic stumps + chr3R 14608532 intergenic stumps + chr3R 14608618 intergenic not near genes chr3R_6_14605001 chr3R_14605001 RAL-774_125 2113 chr3R 14704343 14704410 chr3R 14704470 14704513 16 122 8.0 4.5 6.2 2.2 170 chr3R 14704343 intron kibra - chr3R 14704428 intron kibra - chr3R 14704513 intron kibra - chr3R_16_14700001 chr3R_14700001 RAL-774_125 2114 chr3R 14745804 14745829 chr3R 14745923 14745950 6 120 2.5 0.0 1.2 2.7 146 chr3R 14745804 intron jvl + chr3R 14745877 intron jvl + chr3R 14745950 intron jvl + chr3R_6_14745001 chr3R_14745001 RAL-774_125 2115 chr3R 14756473 14756551 chr3R 14756601 14756688 15 130 2.5 0.0 1.2 6.8 215 chr3R 14756473 intron jvl + chr3R 14756580 intron jvl + chr3R 14756688 intron jvl + chr3R_15_14755001 chr3R_14755001 RAL-774_125 2116 chr3R 14779037 14779085 chr3R 14779168 14779203 12 126 1.5 3.5 2.5 3.4 166 chr3R 14779037 intron jvl + chr3R 14779120 intron jvl + chr3R 14779203 intron jvl + chr3R_12_14775001 chr3R_14775001 RAL-774_125 2117 chr3R 14802424 14802461 chr3R 14802559 14802596 6 134 5.0 5.0 5.0 1.0 172 chr3R 14802424 exon CG14857 + chr3R 14802510 intron CG14857 + chr3R 14802596 intron CG14857 + chr3R_6_14800001 chr3R_14800001 RAL-774_125 2118 chr3R 14812202 14812234 chr3R 14812309 14812348 5 123 5.5 4.5 5.0 0.8 146 chr3R 14812202 intron btsz - chr3R 14812275 intron btsz - chr3R 14812348 intron btsz - chr3R_5_14810001 chr3R_14810001 RAL-774_125 2119 chr3R 14821589 14821628 chr3R 14821788 14821822 5 197 6.0 4.0 5.0 0.8 233 chr3R 14821589 intron btsz - chr3R 14821706 intron btsz - chr3R 14821822 intron btsz - chr3R_5_14820001 chr3R_14820001 RAL-774_125 2120 chr3R 14950287 14950354 chr3R 14950424 14950489 6 135 1.0 0.0 0.5 4.0 202 chr3R 14950287 intergenic not near genes chr3R 14950388 intergenic not near genes chr3R 14950489 intergenic not near genes chr3R_6_14950001 chr3R_14950001 RAL-774_125 2121 chr3R 15031546 15031611 chr3R 15031671 15031728 10 123 3.0 5.0 4.0 2.0 182 chr3R 15031546 intergenic not near genes chr3R 15031637 intergenic not near genes chr3R 15031728 intergenic not near genes chr3R_10_15030001 chr3R_15030001 RAL-774_125 2122 chr3R 15041350 15041361 chr3R 15045184 15045192 Doc 5 3833 3.0 2.0 2.5 1.4 3842 chr3R 15041350 intergenic not near genes chr3R 15043271 intergenic not near genes chr3R 15045192 intergenic not near genes chr3R_5_15040001 chr3R_15040001 RAL-774_125 2123 chr3R 15076616 15076679 chr3R 15076741 15076789 4 120 1.0 4.0 2.5 1.1 173 chr3R 15076616 intron dpr9 - chr3R 15076702 intron dpr9 - chr3R 15076789 intron dpr9 - chr3R_4_15075001 chr3R_15075001 RAL-774_125 2124 chr3R 15079770 15079827 chr3R 15080056 15080105 pogo 9 287 6.5 5.0 5.8 1.3 335 chr3R 15079770 3` UTR CG6966 - chr3R 15079938 3` UTR CG6966 - chr3R 15080105 3` UTR CG6966 - chr3R_9_15075001 chr3R_15075001 RAL-774_125 2125 chr3R 15084101 15084171 chr3R 15084283 15084353 13 181 2.0 4.0 3.0 3.2 252 chr3R 15084101 intron CG6966 - chr3R 15084227 intron CG6966 - chr3R 15084353 intron CG6966 - chr3R_13_15080001 chr3R_15080001 RAL-774_125 2126 chr3R 15088047 15088104 chr3R 15088195 15088245 9 145 4.0 5.5 4.8 1.6 198 chr3R 15088047 intron CG6966 - chr3R 15088146 intron CG6966 - chr3R 15088245 intron CG6966 - chr3R_9_15085001 chr3R_15085001 RAL-774_125 2127 chr3R 15102475 15102517 chr3R 15109779 15109821 412 10 7304 5.0 3.5 4.2 1.9 7346 chr3R 15102475 intron CG42788 - chr3R 15106148 intron CG42788 - chr3R 15109821 intron CG42788 - chr3R_10_15105001 chr3R_15105001 RAL-774_125 2128 chr3R 15114870 15114905 chr3R 15114996 15115021 8 122 8.0 3.0 5.5 1.2 151 chr3R 15114870 intron CG42788 - chr3R 15114946 intron CG42788 - chr3R 15115021 intron CG42788 - chr3R_8_15110001 chr3R_15110001 RAL-774_125 2129 chr3R 15132029 15132067 chr3R 15135139 15135177 Juan 23 3107 7.5 11.5 9.5 2.2 3148 chr3R 15132029 intergenic CG42788 - chr3R 15133603 intergenic not near genes chr3R 15135177 3` UTR CG6912 - chr3R_23_15130001 chr3R_15130001 RAL-774_125 2130 chr3R 15130873 15130898 chr3R 15141213 15141226 7 10327 22.5 21.0 21.8 0.3 10353 chr3R 15130873 intron CG42788 - chr3R 15136050 exon CG6912 - chr3R 15141226 exon CG3987 + chr3R_7_15135001 chr3R_15135001 RAL-774_125 2131 chr3R 15143876 15143947 chr3R 15144109 15144180 7 232 2.5 3.0 2.8 1.8 304 chr3R 15143876 intron GlyS - chr3R 15144028 intron GlyS - chr3R 15144180 intron GlyS - chr3R_7_15140001 chr3R_15140001 RAL-774_125 2132 chr3R 15162514 15162537 chr3R 15167329 15167348 F-element 7 4816 6.5 5.5 6.0 1.0 4834 chr3R 15162514 intron Gyc88E + chr3R 15164931 intron Gyc88E + chr3R 15167348 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 RAL-774_125 2133 chr3R 15162539 15162563 chr3R 15167322 15167380 F-element 7 4811 3.5 4.5 4.0 1.4 4841 chr3R 15162539 intron Gyc88E + chr3R 15164960 intron Gyc88E + chr3R 15167380 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 RAL-774_125 2134 chr3R 15265374 15265419 chr3R 15265509 15265554 4 135 0.5 6.0 3.2 1.0 180 chr3R 15265374 intergenic Set +,Oscp + chr3R 15265464 intergenic Oscp +,Set + chr3R 15265554 intergenic Oscp +,Set + chr3R_4_15265001 chr3R_15265001 RAL-774_125 2135 chr3R 15416217 15416268 chr3R 15416347 15416392 11 123 5.5 9.0 7.2 1.3 175 chr3R 15416217 3` UTR Atx2 + chr3R 15416304 3` UTR Atx2 + chr3R 15416392 3` UTR Atx2 + chr3R_11_15415001 chr3R_15415001 RAL-774_125 2136 chr3R 15585259 15585327 chr3R 15585403 15585411 10 135 2.0 1.5 1.8 3.6 152 chr3R 15585259 intergenic not near genes chr3R 15585335 intergenic not near genes chr3R 15585411 intergenic not near genes chr3R_10_15585001 chr3R_15585001 RAL-774_125 2137 chr3R 15601125 15601190 chr3R 15608697 15608737 412 11 7568 4.5 7.5 6.0 1.6 7612 chr3R 15601125 intergenic not near genes chr3R 15604931 intergenic not near genes chr3R 15608737 intergenic not near genes chr3R_11_15600001 chr3R_15600001 RAL-774_125 2138 chr3R 15618710 15618749 chr3R 15626219 15626271 blood 12 7514 7.0 2.5 4.8 2.1 7561 chr3R 15618710 intergenic not near genes chr3R 15622490 intergenic not near genes chr3R 15626271 intergenic not near genes chr3R_12_15620001 chr3R_15620001 RAL-774_125 2139 chr3R 15635160 15635231 chr3R 15635331 15635393 11 169 0.0 5.0 2.5 3.1 233 chr3R 15635160 intergenic CG43335 + chr3R 15635276 intergenic CG43335 + chr3R 15635393 intergenic CG43335 + chr3R_11_15635001 chr3R_15635001 RAL-774_125 2140 chr3R 15646785 15646798 chr3R 15646881 15646931 6 122 2.0 3.5 2.8 1.6 146 chr3R 15646785 intergenic not near genes chr3R 15646858 intergenic not near genes chr3R 15646931 intergenic not near genes chr3R_6_15645001 chr3R_15645001 RAL-774_125 2141 chr3R 15790089 15790156 chr3R 15790242 15790379 9 161 18.0 11.5 14.8 0.6 290 chr3R 15790089 exon c(3)G - chr3R 15790234 intron c(3)G - chr3R 15790379 exon c(3)G - chr3R_9_15790001 chr3R_15790001 RAL-774_125 2142 chr3R 15790256 15790388 chr3R 15790577 15790644 10 282 15.5 23.5 19.5 0.5 388 chr3R 15790256 exon c(3)G - chr3R 15790450 exon c(3)G - chr3R 15790644 exon c(3)G - chr3R_10_15790001 chr3R_15790001 RAL-774_125 2143 chr3R 15790794 15790862 chr3R 15790960 15791028 8 162 23.0 22.5 22.8 0.3 234 chr3R 15790794 exon c(3)G - chr3R 15790911 intron c(3)G - chr3R 15791028 exon c(3)G - chr3R_8_15790001 chr3R_15790001 RAL-774_125 2144 chr3R 15841065 15841106 chr3R 15845360 15845422 9 4303 25.0 23.5 24.2 0.4 4357 chr3R 15841065 exon spn-E + chr3R 15843244 exon spn-E + chr3R 15845422 intron cv-d - chr3R_9_15840001 chr3R_15840001 RAL-774_125 2145 chr3R 15891647 15891687 chr3R 15892084 15892088 6 428 5.0 7.5 6.2 0.8 441 chr3R 15891647 intron CG14877 - chr3R 15891868 intron CG14877 - chr3R 15892088 intron CG14877 - chr3R_6_15890001 chr3R_15890001 RAL-774_125 2146 chr3R 16048813 16048880 chr3R 16048947 16049020 13 129 4.0 3.0 3.5 2.9 207 chr3R 16048813 intron ird5 - chr3R 16048916 intron ird5 - chr3R 16049020 intron ird5 - chr3R_13_16045001 chr3R_16045001 RAL-774_125 2147 chr3R 16073391 16073469 chr3R 16073545 16073623 11 153 1.5 2.5 2.0 3.7 232 chr3R 16073391 exon Mhcl - chr3R 16073507 intron Mhcl - chr3R 16073623 intron Mhcl - chr3R_11_16070001 chr3R_16070001 RAL-774_125 2148 chr3R 16167775 16167832 chr3R 16167920 16167977 10 144 3.5 5.5 4.5 1.8 202 chr3R 16167775 intron CG6006 + chr3R 16167876 intron CG6006 + chr3R 16167977 exon CG6006 + chr3R_10_16165001 chr3R_16165001 RAL-774_125 2149 chr3R 16189362 16189442 chr3R 16189815 16189889 invader4 8 450 3.5 3.0 3.2 1.9 527 chr3R 16189362 intron sra + chr3R 16189626 intron sra + chr3R 16189889 intron sra + chr3R_8_16185001 chr3R_16185001 RAL-774_125 2150 chr3R 16374261 16374323 chr3R 16374428 16374490 11 166 3.0 4.0 3.5 2.4 229 chr3R 16374261 intergenic ss - chr3R 16374376 intergenic ss - chr3R 16374490 3` UTR ss - chr3R_11_16370001 chr3R_16370001 RAL-774_125 2151 chr3R 16521167 16521233 chr3R 16521292 16521358 16 132 4.0 2.5 3.2 3.8 191 chr3R 16521167 intron CG42342 + chr3R 16521262 intron CG42342 + chr3R 16521358 intron CG42342 + chr3R_16_16520001 chr3R_16520001 RAL-774_125 2152 chr3R 16582869 16582903 chr3R 16582998 16583019 5 123 5.0 5.5 5.2 0.8 150 chr3R 16582869 intron Scp2 - chr3R 16582944 intron Scp2 - chr3R 16583019 intron Scp2 - chr3R_5_16580001 chr3R_16580001 RAL-774_125 2153 chr3R 16583461 16583488 chr3R 16583590 16583615 6 127 11.0 4.5 7.8 0.7 154 chr3R 16583461 intron Scp2 - chr3R 16583538 intron Scp2 - chr3R 16583615 5` UTR Scp2 - chr3R_6_16580001 chr3R_16580001 RAL-774_125 2154 chr3R 16621507 16621548 chr3R 16621598 16621657 11 108 5.0 6.0 5.5 1.7 150 chr3R 16621507 exon CG14893 + chr3R 16621582 exon CG14893 + chr3R 16621657 exon CG14893 + chr3R_11_16620001 chr3R_16620001 RAL-774_125 2155 chr3R 16756305 16756354 chr3R 16762515 16762530 diver 9 6221 0.5 0.5 0.5 6.0 6225 chr3R 16756305 intron bxd - chr3R 16759418 intron bxd - chr3R 16762530 intron bxd - chr3R_9_16755001 chr3R_16755001 RAL-774_125 2156 chr3R 16860396 16860422 chr3R 16860524 16860539 6 126 4.0 3.0 3.5 1.3 143 chr3R 16860396 intron iab-8 - chr3R 16860468 intron iab-8 - chr3R 16860539 intron iab-8 - chr3R_6_16860001 chr3R_16860001 RAL-774_125 2157 chr3R 16910438 16910486 chr3R 16910634 16910695 9 184 4.0 4.0 4.0 1.8 257 chr3R 16910438 intron iab-8 - chr3R 16910566 intron iab-8 - chr3R 16910695 intron iab-8 - chr3R_9_16910001 chr3R_16910001 RAL-774_125 2158 chr3R 17066749 17066812 chr3R 17066882 17066938 7 133 5.0 4.5 4.8 1.2 189 chr3R 17066749 intron Dad + chr3R 17066844 intron Dad + chr3R 17066938 intron Dad + chr3R_7_17065001 chr3R_17065001 RAL-774_125 2159 chr3R 17099532 17099546 chr3R 17099658 17099672 4 123 8.5 5.5 7.0 0.5 140 chr3R 17099532 intron cher - chr3R 17099602 intron cher - chr3R 17099672 intron cher - chr3R_4_17095001 chr3R_17095001 RAL-774_125 2160 chr3R 17184687 17184729 chr3R 17184813 17184848 5 125 3.0 4.5 3.8 1.0 161 chr3R 17184687 intron Mur89F - chr3R 17184768 intron Mur89F - chr3R 17184848 intron Mur89F - chr3R_5_17180001 chr3R_17180001 RAL-774_125 2161 chr3R 17209664 17209685 chr3R 17209802 17209823 4 137 6.5 6.5 6.5 0.5 159 chr3R 17209664 intergenic not near genes chr3R 17209744 intergenic not near genes chr3R 17209823 intergenic not near genes chr3R_4_17205001 chr3R_17205001 RAL-774_125 2162 chr3R 17268626 17268698 chr3R 17268798 17268870 9 169 3.5 5.5 4.5 1.6 244 chr3R 17268626 intergenic not near genes chr3R 17268748 intergenic not near genes chr3R 17268870 intergenic not near genes chr3R_9_17265001 chr3R_17265001 RAL-774_125 2163 chr3R 17290402 17290470 chr3R 17290538 17290606 9 135 2.0 4.5 3.2 2.1 204 chr3R 17290402 intergenic not near genes chr3R 17290504 intergenic not near genes chr3R 17290606 intergenic not near genes chr3R_9_17290001 chr3R_17290001 RAL-774_125 2164 chr3R 17294644 17294681 chr3R 17295122 17295159 BS 5 478 3.0 6.0 4.5 0.9 515 chr3R 17294644 intergenic not near genes chr3R 17294902 intergenic not near genes chr3R 17295159 intergenic not near genes chr3R_5_17290001 chr3R_17290001 RAL-774_125 2165 chr3R 17312785 17312830 chr3R 17312909 17312918 9 121 4.0 3.0 3.5 2.0 133 chr3R 17312785 intergenic not near genes chr3R 17312852 intergenic not near genes chr3R 17312918 intergenic not near genes chr3R_9_17310001 chr3R_17310001 RAL-774_125 2166 chr3R 17346655 17346706 chr3R 17348268 17348319 F-element 12 1613 4.5 5.5 5.0 2.0 1664 chr3R 17346655 intron beat-IIa - chr3R 17347487 intron beat-IIa - chr3R 17348319 intron beat-IIa - chr3R_12_17345001 chr3R_17345001 RAL-774_125 2167 chr3R 17355447 17355520 chr3R 17355571 17355628 17 118 6.0 4.0 5.0 2.8 181 chr3R 17355447 intron beat-IIa - chr3R 17355538 intron beat-IIa - chr3R 17355628 intron beat-IIa - chr3R_17_17355001 chr3R_17355001 RAL-774_125 2168 chr3R 17461157 17461224 chr3R 17461286 17461351 7 131 5.5 3.0 4.2 1.3 194 chr3R 17461157 intergenic not near genes chr3R 17461254 intergenic not near genes chr3R 17461351 intergenic not near genes chr3R_7_17460001 chr3R_17460001 RAL-774_125 2169 chr3R 17497919 17497985 chr3R 17498055 17498121 10 135 2.5 3.5 3.0 2.5 202 chr3R 17497919 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498121 intron Dscam3 - chr3R_10_17495001 chr3R_17495001 RAL-774_125 2170 chr3R 17498849 17498866 chr3R 17499041 17499053 7 190 6.5 8.5 7.5 0.8 204 chr3R 17498849 intron Dscam3 - chr3R 17498951 intron Dscam3 - chr3R 17499053 intron Dscam3 - chr3R_7_17495001 chr3R_17495001 RAL-774_125 2171 chr3R 17509217 17509239 chr3R 17516815 17516817 412 5 7592 2.5 5.5 4.0 1.0 7600 chr3R 17509217 intergenic not near genes chr3R 17513017 intergenic not near genes chr3R 17516817 intergenic not near genes chr3R_5_17510001 chr3R_17510001 RAL-774_125 2172 chr3R 17524864 17524926 chr3R 17524987 17525056 5 122 0.0 2.5 1.2 2.3 192 chr3R 17524864 intergenic not near genes chr3R 17524960 intergenic not near genes chr3R 17525056 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-774_125 2173 chr3R 17554315 17554373 chr3R 17554642 17554688 11 320 4.5 3.5 4.0 2.2 373 chr3R 17554315 intergenic not near genes chr3R 17554502 intergenic not near genes chr3R 17554688 intergenic not near genes chr3R_11_17550001 chr3R_17550001 RAL-774_125 2174 chr3R 17591273 17591302 chr3R 17591727 17591788 F-element 8 470 4.0 2.5 3.2 1.9 515 chr3R 17591273 intergenic not near genes chr3R 17591530 intergenic not near genes chr3R 17591788 intergenic not near genes chr3R_8_17590001 chr3R_17590001 RAL-774_125 2175 chr3R 17638277 17638324 chr3R 17638808 17638860 roo 9 535 5.0 4.0 4.5 1.6 583 chr3R 17638277 intron CG43175 + chr3R 17638568 intron CG43175 + chr3R 17638860 intron,intron CG43175 +,CR45222 + chr3R_9_17635001 chr3R_17635001 RAL-774_125 2176 chr3R 17647202 17647264 chr3R 17647346 17647402 10 145 6.0 3.0 4.5 1.8 200 chr3R 17647202 intergenic CG14322 + chr3R 17647302 intergenic CG14322 + chr3R 17647402 intergenic CG14322 + chr3R_10_17645001 chr3R_17645001 RAL-774_125 2177 chr3R 17702140 17702195 chr3R 17702257 17702294 11 113 5.0 4.0 4.5 2.0 154 chr3R 17702140 intron osa - chr3R 17702217 intron osa - chr3R 17702294 intron osa - chr3R_11_17700001 chr3R_17700001 RAL-774_125 2178 chr3R 17773353 17773389 chr3R 17773483 17773509 8 128 6.5 5.5 6.0 1.1 156 chr3R 17773353 exon CG43102 - chr3R 17773431 intron CG43102 - chr3R 17773509 exon CG43102 - chr3R_8_17770001 chr3R_17770001 RAL-774_125 2179 chr3R 17823163 17823229 chr3R 17823298 17823364 14 134 2.5 5.0 3.8 2.9 201 chr3R 17823163 intron tinc + chr3R 17823264 intron tinc + chr3R 17823364 intron tinc + chr3R_14_17820001 chr3R_17820001 RAL-774_125 2180 chr3R 17898340 17898352 chr3R 17898457 17898471 4 124 5.5 10.0 7.8 0.5 131 chr3R 17898340 intron Rim - chr3R 17898406 intron Rim - chr3R 17898471 intron Rim - chr3R_4_17895001 chr3R_17895001 RAL-774_125 2181 chr3R 17899046 17899062 chr3R 17899174 17899184 5 127 5.0 4.0 4.5 0.9 138 chr3R 17899046 intron Rim - chr3R 17899115 intron Rim - chr3R 17899184 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-774_125 2182 chr3R 17923109 17923164 chr3R 17923241 17923281 15 131 5.0 3.0 4.0 3.0 172 chr3R 17923109 intron cpo + chr3R 17923195 intron cpo + chr3R 17923281 intron cpo + chr3R_15_17920001 chr3R_17920001 RAL-774_125 2183 chr3R 17925813 17925866 chr3R 17927330 17927358 hobo 6 1513 6.5 4.5 5.5 0.9 1545 chr3R 17925813 intron cpo + chr3R 17926586 intron cpo + chr3R 17927358 intron cpo + chr3R_6_17925001 chr3R_17925001 RAL-774_125 2184 chr3R 18032742 18032807 chr3R 18040460 18040525 opus 5 7718 1.0 2.5 1.8 1.8 7783 chr3R 18032742 intergenic not near genes chr3R 18036634 intergenic not near genes chr3R 18040525 intergenic not near genes chr3R_5_18035001 chr3R_18035001 RAL-774_125 2185 chr3R 18061394 18061443 chr3R 18061536 18061585 6 141 6.5 0.0 3.2 1.4 191 chr3R 18061394 intergenic not near genes chr3R 18061490 intergenic not near genes chr3R 18061585 intergenic not near genes chr3R_6_18060001 chr3R_18060001 RAL-774_125 2186 chr3R 18061562 18061577 chr3R 18063186 18063201 F-element 4 1624 0.0 0.0 0.0 4.0 1639 chr3R 18061562 intergenic not near genes chr3R 18062382 intergenic not near genes chr3R 18063201 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-774_125 2187 chr3R 18088344 18088398 chr3R 18088471 18088525 11 128 6.0 4.0 5.0 1.8 181 chr3R 18088344 intergenic not near genes chr3R 18088434 intergenic not near genes chr3R 18088525 intergenic not near genes chr3R_11_18085001 chr3R_18085001 RAL-774_125 2188 chr3R 18119701 18119750 chr3R 18119823 18119877 7 125 0.5 1.0 0.8 3.9 176 chr3R 18119701 intron sr + chr3R 18119789 intron sr + chr3R 18119877 intron sr + chr3R_7_18115001 chr3R_18115001 RAL-774_125 2189 chr3R 18122847 18122911 chr3R 18122975 18123038 4 127 2.0 3.5 2.8 1.1 191 chr3R 18122847 intron sr + chr3R 18122942 intron sr + chr3R 18123038 intron sr + chr3R_4_18120001 chr3R_18120001 RAL-774_125 2190 chr3R 18128496 18128538 chr3R 18128650 18128692 12 150 3.5 2.5 3.0 3.0 196 chr3R 18128496 intron sr + chr3R 18128594 intron sr + chr3R 18128692 intron sr + chr3R_12_18125001 chr3R_18125001 RAL-774_125 2191 chr3R 18136157 18136183 chr3R 18136350 18136371 5 192 3.5 2.5 3.0 1.2 214 chr3R 18136157 intergenic not near genes chr3R 18136264 intergenic not near genes chr3R 18136371 intergenic not near genes chr3R_5_18135001 chr3R_18135001 RAL-774_125 2192 chr3R 18143446 18143508 chr3R 18143583 18143646 8 138 5.5 0.0 2.8 2.1 200 chr3R 18143446 intergenic not near genes chr3R 18143546 intergenic not near genes chr3R 18143646 intergenic not near genes chr3R_8_18140001 chr3R_18140001 RAL-774_125 2193 chr3R 18179516 18179543 chr3R 18179642 18179669 7 126 0.0 2.0 1.0 3.5 153 chr3R 18179516 3` UTR,3` UTR PP2A-B' +,cdm - chr3R 18179592 3` UTR,3` UTR PP2A-B' +,cdm - chr3R 18179669 3` UTR,3` UTR PP2A-B' +,cdm - chr3R_7_18175001 chr3R_18175001 RAL-774_125 2194 chr3R 18472233 18472299 chr3R 18472384 18472450 14 150 3.0 2.0 2.5 4.0 217 chr3R 18472233 intron fru - chr3R 18472342 intron fru - chr3R 18472450 intron fru - chr3R_14_18470001 chr3R_18470001 RAL-774_125 2195 chr3R 18485292 18485353 chr3R 18485442 18485503 4 146 1.5 2.0 1.8 1.4 211 chr3R 18485292 intron fru - chr3R 18485398 intron fru - chr3R 18485503 intron fru - chr3R_4_18485001 chr3R_18485001 RAL-774_125 2196 chr3R 18500698 18500735 chr3R 18500869 18500900 7 169 2.5 7.0 4.8 1.2 202 chr3R 18500698 intron fru - chr3R 18500799 intron fru - chr3R 18500900 intron fru - chr3R_7_18500001 chr3R_18500001 RAL-774_125 2197 chr3R 18501556 18501612 chr3R 18501687 18501743 11 131 4.5 3.0 3.8 2.3 187 chr3R 18501556 intron fru - chr3R 18501650 intron fru - chr3R 18501743 intron fru - chr3R_11_18500001 chr3R_18500001 RAL-774_125 2198 chr3R 18502552 18502559 chr3R 18502656 18502656 4 108 7.0 9.5 8.2 0.4 104 chr3R 18502552 intron fru - chr3R 18502604 intron fru - chr3R 18502656 intron fru - chr3R_4_18500001 chr3R_18500001 RAL-774_125 2199 chr3R 18561323 18561352 chr3R 18561447 18561447 7 107 3.5 4.0 3.8 1.5 124 chr3R 18561323 3` UTR CG7691 + chr3R 18561385 intergenic CG7691 + chr3R 18561447 intergenic CG7691 + chr3R_7_18560001 chr3R_18560001 RAL-774_125 2200 chr3R 18562521 18562585 chr3R 18562690 18562755 8 168 4.0 3.0 3.5 1.8 234 chr3R 18562521 intergenic not near genes chr3R 18562638 intergenic not near genes chr3R 18562755 intergenic not near genes chr3R_8_18560001 chr3R_18560001 RAL-774_125 2201 chr3R 18575527 18575598 chr3R 18575661 18575732 15 123 4.0 4.0 4.0 3.0 205 chr3R 18575527 intron,intron CG7694 +,fray + chr3R 18575630 intron,intron CG7694 +,fray + chr3R 18575732 intron,intron CG7694 +,fray + chr3R_15_18575001 chr3R_18575001 RAL-774_125 2202 chr3R 18606467 18606522 chr3R 18610749 18610798 F-element 13 4277 3.5 3.5 3.5 2.9 4331 chr3R 18606467 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610798 intron,intron qin +,CG14304 - chr3R_13_18605001 chr3R_18605001 RAL-774_125 2203 chr3R 18720287 18720335 chr3R 18720412 18720476 9 142 2.5 4.0 3.2 2.1 189 chr3R 18720287 intron Cha + chr3R 18720382 intron Cha + chr3R 18720476 intron Cha + chr3R_9_18720001 chr3R_18720001 RAL-774_125 2204 chr3R 18729985 18730016 chr3R 18730111 18730122 5 122 3.0 5.0 4.0 1.0 137 chr3R 18729985 exon Cha + chr3R 18730054 intron Cha + chr3R 18730122 exon Cha + chr3R_5_18730001 chr3R_18730001 RAL-774_125 2205 chr3R 18766743 18766806 chr3R 18766860 18766875 16 122 2.0 2.0 2.0 5.3 132 chr3R 18766743 intron CG7720 - chr3R 18766809 intron CG7720 - chr3R 18766875 intron CG7720 - chr3R_16_18765001 chr3R_18765001 RAL-774_125 2206 chr3R 18781659 18781720 chr3R 18781778 18781846 8 118 4.5 1.0 2.8 2.1 187 chr3R 18781659 intron CG7720 - chr3R 18781752 intron CG7720 - chr3R 18781846 intron CG7720 - chr3R_8_18780001 chr3R_18780001 RAL-774_125 2207 chr3R 18782713 18782770 chr3R 18782857 18782914 9 140 3.5 4.0 3.8 1.9 201 chr3R 18782713 intron CG7720 - chr3R 18782814 intron CG7720 - chr3R 18782914 intron CG7720 - chr3R_9_18780001 chr3R_18780001 RAL-774_125 2208 chr3R 18785833 18785894 chr3R 18785959 18786016 13 126 4.5 0.0 2.2 4.1 183 chr3R 18785833 intron CG7720 - chr3R 18785924 intron CG7720 - chr3R 18786016 intron CG7720 - chr3R_13_18785001 chr3R_18785001 RAL-774_125 2209 chr3R 18791480 18791511 chr3R 18791588 18791599 7 111 4.5 2.5 3.5 1.6 119 chr3R 18791480 intron CG7720 - chr3R 18791540 intron CG7720 - chr3R 18791599 intron CG7720 - chr3R_7_18790001 chr3R_18790001 RAL-774_125 2210 chr3R 18792795 18792828 chr3R 18792928 18792956 6 131 0.0 0.0 0.0 6.0 161 chr3R 18792795 intron CG7720 - chr3R 18792876 intron CG7720 - chr3R 18792956 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-774_125 2211 chr3R 18812029 18812098 chr3R 18812157 18812226 9 127 4.0 8.5 6.2 1.2 197 chr3R 18812029 intron CG18208 - chr3R 18812128 intron CG18208 - chr3R 18812226 intron CG18208 - chr3R_9_18810001 chr3R_18810001 RAL-774_125 2212 chr3R 18863111 18863181 chr3R 18863248 18863317 8 136 1.5 4.5 3.0 2.0 206 chr3R 18863111 intergenic not near genes chr3R 18863214 intergenic not near genes chr3R 18863317 intergenic not near genes chr3R_8_18860001 chr3R_18860001 RAL-774_125 2213 chr3R 18887553 18887598 chr3R 18887684 18887729 10 124 5.0 5.5 5.2 1.6 176 chr3R 18887553 intergenic not near genes chr3R 18887641 intergenic not near genes chr3R 18887729 intergenic not near genes chr3R_10_18885001 chr3R_18885001 RAL-774_125 2214 chr3R 18933776 18933797 chr3R 18933882 18933914 6 112 9.5 5.0 7.2 0.7 138 chr3R 18933776 intron CG42613 + chr3R 18933845 intron CG42613 + chr3R 18933914 intron CG42613 + chr3R_6_18930001 chr3R_18930001 RAL-774_125 2215 chr3R 18988510 18988552 chr3R 18988792 18988858 9 302 3.5 3.5 3.5 2.0 348 chr3R 18988510 intron gukh + chr3R 18988684 intron gukh + chr3R 18988858 intron gukh + chr3R_9_18985001 chr3R_18985001 RAL-774_125 2216 chr3R 18991349 18991412 chr3R 18991476 18991507 13 115 4.5 5.0 4.8 2.2 158 chr3R 18991349 intron gukh + chr3R 18991428 intron gukh + chr3R 18991507 intron gukh + chr3R_13_18990001 chr3R_18990001 RAL-774_125 2217 chr3R 19078070 19078121 chr3R 19078211 19078252 16 130 6.0 3.5 4.8 2.8 182 chr3R 19078070 intron cdi - chr3R 19078161 intron cdi - chr3R 19078252 intron cdi - chr3R_16_19075001 chr3R_19075001 RAL-774_125 2218 chr3R 19117014 19117045 chr3R 19117208 19117209 4 184 10.5 0.0 5.2 0.6 195 chr3R 19117014 intron CG6040 + chr3R 19117112 intron CG6040 + chr3R 19117209 intron CG6040 + chr3R_4_19115001 chr3R_19115001 RAL-774_125 2219 chr3R 19139732 19139796 chr3R 19139877 19139941 10 140 7.5 3.5 5.5 1.5 209 chr3R 19139732 3` UTR Ppcs - chr3R 19139836 3` UTR Ppcs - chr3R 19139941 3` UTR Ppcs - chr3R_10_19135001 chr3R_19135001 RAL-774_125 2220 chr3R 19159926 19159950 chr3R 19160061 19160080 4 134 5.0 3.5 4.2 0.8 154 chr3R 19159926 3` UTR nos + chr3R 19160003 3` UTR nos + chr3R 19160080 3` UTR nos + chr3R_4_19160001 chr3R_19160001 RAL-774_125 2221 chr3R 19271407 19271445 chr3R 19271512 19271575 10 109 5.0 8.0 6.5 1.3 168 chr3R 19271407 intergenic not near genes chr3R 19271491 intergenic not near genes chr3R 19271575 intergenic not near genes chr3R_10_19270001 chr3R_19270001 RAL-774_125 2222 chr3R 19276881 19276910 chr3R 19277011 19277040 6 126 7.0 0.5 3.8 1.2 159 chr3R 19276881 intergenic not near genes chr3R 19276960 intergenic not near genes chr3R 19277040 intergenic not near genes chr3R_6_19275001 chr3R_19275001 RAL-774_125 2223 chr3R 19340352 19340422 chr3R 19340479 19340549 15 124 4.0 4.0 4.0 3.0 197 chr3R 19340352 intergenic not near genes chr3R 19340450 intergenic not near genes chr3R 19340549 intergenic not near genes chr3R_15_19340001 chr3R_19340001 RAL-774_125 2224 chr3R 19494367 19494413 chr3R 19494497 19494538 4 128 3.5 4.0 3.8 0.8 171 chr3R 19494367 intron Dys + chr3R 19494452 intron Dys + chr3R 19494538 intron Dys + chr3R_4_19490001 chr3R_19490001 RAL-774_125 2225 chr3R 19502950 19502954 chr3R 19503082 19503086 4 132 5.0 0.0 2.5 1.1 136 chr3R 19502950 intron Dys + chr3R 19503018 intron Dys + chr3R 19503086 intron Dys + chr3R_4_19500001 chr3R_19500001 RAL-774_125 2226 chr3R 19505898 19505965 chr3R 19506046 19506064 19 145 4.5 8.5 6.5 2.5 166 chr3R 19505898 exon Dys + chr3R 19505981 intron Dys + chr3R 19506064 intron Dys + chr3R_19_19505001 chr3R_19505001 RAL-774_125 2227 chr3R 19563675 19563732 chr3R 19563803 19563860 15 127 9.0 4.5 6.8 1.9 185 chr3R 19563675 intron Dys + chr3R 19563768 intron Dys + chr3R 19563860 intron Dys + chr3R_15_19560001 chr3R_19560001 RAL-774_125 2228 chr3R 19602528 19602595 chr3R 19602658 19602725 11 123 4.5 3.5 4.0 2.2 197 chr3R 19602528 exon CG7333 + chr3R 19602626 3` UTR CG7333 + chr3R 19602725 intergenic CG7333 + chr3R_11_19600001 chr3R_19600001 RAL-774_125 2229 chr3R 19611999 19612047 chr3R 19615982 19616048 13 3990 19.0 24.0 21.5 0.6 4049 chr3R 19611999 exon CG17752 + chr3R 19614024 exon CG16727 + chr3R 19616048 3` UTR CG6231 - chr3R_13_19610001 chr3R_19610001 RAL-774_125 2230 chr3R 19830849 19830883 chr3R 19830976 19831010 4 127 0.0 2.0 1.0 2.0 161 chr3R 19830849 intron bnl - chr3R 19830930 intron bnl - chr3R 19831010 intron bnl - chr3R_4_19830001 chr3R_19830001 RAL-774_125 2231 chr3R 19839500 19839551 chr3R 19839782 19839826 10 278 2.5 5.0 3.8 2.1 326 chr3R 19839500 intergenic not near genes chr3R 19839663 intergenic not near genes chr3R 19839826 intergenic not near genes chr3R_10_19835001 chr3R_19835001 RAL-774_125 2232 chr3R 19846917 19846951 chr3R 19847127 19847162 11 204 6.0 2.5 4.2 2.1 245 chr3R 19846917 intergenic CG4662 + chr3R 19847040 intergenic CG4662 + chr3R 19847162 intergenic CG4662 + chr3R_11_19845001 chr3R_19845001 RAL-774_125 2233 chr3R 19908221 19908303 chr3R 19908355 19908413 9 129 0.0 4.0 2.0 3.0 192 chr3R 19908221 intron RhoGAP92B + chr3R 19908317 intron RhoGAP92B + chr3R 19908413 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_9_19905001 chr3R_19905001 RAL-774_125 2234 chr3R 19912183 19912226 chr3R 19912304 19912353 5 123 5.5 5.0 5.2 0.8 170 chr3R 19912183 intron RhoGAP92B + chr3R 19912268 intron RhoGAP92B + chr3R 19912353 exon RhoGAP92B + chr3R_5_19910001 chr3R_19910001 RAL-774_125 2235 chr3R 19930969 19931030 chr3R 19931088 19931160 20 129 5.0 1.5 3.2 4.8 191 chr3R 19930969 intron Hs6st - chr3R 19931064 intron Hs6st - chr3R 19931160 intron Hs6st - chr3R_20_19930001 chr3R_19930001 RAL-774_125 2236 chr3R 19939727 19939787 chr3R 19939946 19939991 10 223 4.0 7.0 5.5 1.5 264 chr3R 19939727 intron Hs6st - chr3R 19939859 intron Hs6st - chr3R 19939991 intron Hs6st - chr3R_10_19935001 chr3R_19935001 RAL-774_125 2237 chr3R 19963591 19963651 chr3R 19963727 19963787 7 135 3.5 4.0 3.8 1.5 196 chr3R 19963591 intron Hs6st - chr3R 19963689 intron Hs6st - chr3R 19963787 intron Hs6st - chr3R_7_19960001 chr3R_19960001 RAL-774_125 2238 chr3R 19981433 19981446 chr3R 19981544 19981575 5 125 3.5 1.5 2.5 1.4 142 chr3R 19981433 intron Hs6st - chr3R 19981504 intron Hs6st - chr3R 19981575 intron Hs6st - chr3R_5_19980001 chr3R_19980001 RAL-774_125 2239 chr3R 20041075 20041144 chr3R 20041227 20041269 16 140 4.5 5.5 5.0 2.7 194 chr3R 20041075 intron CG17193 - chr3R 20041172 intron CG17193 - chr3R 20041269 intron CG17193 - chr3R_16_20040001 chr3R_20040001 RAL-774_125 2240 chr3R 20087134 20087161 chr3R 20087278 20087295 4 140 3.0 0.0 1.5 1.6 161 chr3R 20087134 intergenic not near genes chr3R 20087214 intergenic not near genes chr3R 20087295 intergenic not near genes chr3R_4_20085001 chr3R_20085001 RAL-774_125 2241 chr3R 20109500 20109558 chr3R 20114756 20114814 copia 11 5255 2.0 4.0 3.0 2.8 5314 chr3R 20109500 intergenic not near genes chr3R 20112157 intergenic not near genes chr3R 20114814 intergenic CG10887 + chr3R_11_20110001 chr3R_20110001 RAL-774_125 2242 chr3R 20156652 20156665 chr3R 20165872 20165885 roo 4 9220 13.0 5.0 9.0 0.4 9233 chr3R 20156652 intergenic not near genes chr3R 20161268 intergenic not near genes chr3R 20165885 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-774_125 2243 chr3R 20156666 20156715 chr3R 20165868 20165935 roo 11 9217 6.0 4.5 5.2 1.8 9269 chr3R 20156666 intergenic not near genes chr3R 20161300 intergenic not near genes chr3R 20165935 intergenic not near genes chr3R_11_20160001 chr3R_20160001 RAL-774_125 2244 chr3R 20205527 20205579 chr3R 20205699 20205750 13 172 4.0 3.0 3.5 2.9 223 chr3R 20205527 intron Nlg4 + chr3R 20205638 intron Nlg4 + chr3R 20205750 intron Nlg4 + chr3R_13_20205001 chr3R_20205001 RAL-774_125 2245 chr3R 20209758 20209816 chr3R 20209894 20209952 10 134 7.0 4.5 5.8 1.5 194 chr3R 20209758 intron,5` UTR Nlg4 +,CG17199 - chr3R 20209855 intron Nlg4 + chr3R 20209952 intron Nlg4 + chr3R_10_20205001 chr3R_20205001 RAL-774_125 2246 chr3R 20222516 20222578 chr3R 20222782 20222792 12 254 2.0 3.5 2.8 3.2 276 chr3R 20222516 intron Nlg4 + chr3R 20222654 intron Nlg4 + chr3R 20222792 intron Nlg4 + chr3R_12_20220001 chr3R_20220001 RAL-774_125 2247 chr3R 20266483 20266539 chr3R 20273004 20273052 Burdock 9 6518 2.5 4.5 3.5 2.0 6569 chr3R 20266483 intron cic + chr3R 20269768 intron cic + chr3R 20273052 intron cic + chr3R_9_20265001 chr3R_20265001 RAL-774_125 2248 chr3R 20330965 20331016 chr3R 20331501 20331552 roo 8 535 3.0 4.0 3.5 1.8 587 chr3R 20330965 intergenic Sirt2 + chr3R 20331258 intergenic Sirt2 + chr3R 20331552 intergenic not near genes chr3R_8_20330001 chr3R_20330001 RAL-774_125 2249 chr3R 20450068 20450144 chr3R 20450198 20450279 9 131 0.0 0.0 0.0 9.0 211 chr3R 20450068 intron Gfrl - chr3R 20450174 intron Gfrl - chr3R 20450279 intron Gfrl - chr3R_9_20450001 chr3R_20450001 RAL-774_125 2250 chr3R 20467088 20467102 chr3R 20467159 20467213 5 98 3.5 3.5 3.5 1.1 125 chr3R 20467088 intron Gfrl - chr3R 20467150 intron Gfrl - chr3R 20467213 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-774_125 2251 chr3R 20469242 20469302 chr3R 20469384 20469438 9 144 3.5 1.0 2.2 2.8 196 chr3R 20469242 intron Gfrl - chr3R 20469340 intron Gfrl - chr3R 20469438 intron Gfrl - chr3R_9_20465001 chr3R_20465001 RAL-774_125 2252 chr3R 20498445 20498477 chr3R 20498577 20498609 6 130 4.5 2.5 3.5 1.3 164 chr3R 20498445 intergenic not near genes chr3R 20498527 intergenic not near genes chr3R 20498609 intergenic not near genes chr3R_6_20495001 chr3R_20495001 RAL-774_125 2253 chr3R 20506567 20506578 chr3R 20507420 20507431 BS 4 853 0.0 7.5 3.8 0.8 864 chr3R 20506567 intergenic Or92a + chr3R 20506999 intergenic CG4288 - chr3R 20507431 3` UTR CG4288 - chr3R_4_20505001 chr3R_20505001 RAL-774_125 2254 chr3R 20506581 20506602 chr3R 20507415 20507455 BS 5 848 0.0 6.5 3.2 1.2 874 chr3R 20506581 intergenic Or92a + chr3R 20507018 intergenic CG4288 - chr3R 20507455 3` UTR CG4288 - chr3R_5_20505001 chr3R_20505001 RAL-774_125 2255 chr3R 20513000 20513025 chr3R 20515753 20515773 opus 4 2751 3.0 2.5 2.8 1.1 2773 chr3R 20513000 intergenic not near genes chr3R 20514386 intergenic not near genes chr3R 20515773 intergenic not near genes chr3R_4_20510001 chr3R_20510001 RAL-774_125 2256 chr3R 20516490 20516572 chr3R 20516896 20516968 23 404 3.0 3.5 3.2 5.5 478 chr3R 20516490 intergenic not near genes chr3R 20516729 intergenic not near genes chr3R 20516968 intergenic not near genes chr3R_23_20515001 chr3R_20515001 RAL-774_125 2257 chr3R 20553433 20553479 chr3R 20553572 20553602 5 130 1.5 6.0 3.8 1.0 169 chr3R 20553433 intron,intron att-ORFA -,att-ORFB - chr3R 20553518 intron,intron att-ORFA -,att-ORFB - chr3R 20553602 exon,exon att-ORFA -,att-ORFB - chr3R_5_20550001 chr3R_20550001 RAL-774_125 2258 chr3R 20684179 20684221 chr3R 20684313 20684355 13 134 6.5 5.5 6.0 1.9 176 chr3R 20684179 intergenic not near genes chr3R 20684267 intergenic not near genes chr3R 20684355 intergenic not near genes chr3R_13_20680001 chr3R_20680001 RAL-774_125 2259 chr3R 20722816 20722875 chr3R 20722983 20723046 13 168 2.5 2.5 2.5 3.7 230 chr3R 20722816 intergenic not near genes chr3R 20722931 intergenic not near genes chr3R 20723046 intergenic not near genes chr3R_13_20720001 chr3R_20720001 RAL-774_125 2260 chr3R 20730895 20730954 chr3R 20731036 20731112 5 144 5.5 0.0 2.8 1.3 217 chr3R 20730895 intergenic not near genes chr3R 20731004 intergenic not near genes chr3R 20731112 intergenic not near genes chr3R_5_20730001 chr3R_20730001 RAL-774_125 2261 chr3R 20787403 20787420 chr3R 20787544 20787561 4 141 5.5 4.5 5.0 0.7 158 chr3R 20787403 intron Syp + chr3R 20787482 intron Syp + chr3R 20787561 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-774_125 2262 chr3R 20787425 20787458 chr3R 20787530 20787593 7 131 4.0 2.0 3.0 1.8 168 chr3R 20787425 intron Syp + chr3R 20787509 intron Syp + chr3R 20787593 intron Syp + chr3R_7_20785001 chr3R_20785001 RAL-774_125 2263 chr3R 20826779 20826818 chr3R 20826905 20826955 10 133 4.0 3.0 3.5 2.2 176 chr3R 20826779 intron AdSS - chr3R 20826867 intron AdSS - chr3R 20826955 intron AdSS - chr3R_10_20825001 chr3R_20825001 RAL-774_125 2264 chr3R 20848313 20848357 chr3R 20848453 20848497 4 140 0.0 3.5 1.8 1.4 184 chr3R 20848313 intergenic not near genes chr3R 20848405 intergenic not near genes chr3R 20848497 intergenic not near genes chr3R_4_20845001 chr3R_20845001 RAL-774_125 2265 chr3R 20850049 20850108 chr3R 20850178 20850243 9 134 0.5 3.5 2.0 3.0 194 chr3R 20850049 intergenic RpS30 + chr3R 20850146 intergenic RpS30 + chr3R 20850243 intergenic RpS30 + chr3R_9_20850001 chr3R_20850001 RAL-774_125 2266 chr3R 20854469 20854510 chr3R 20859279 20859320 Doc 13 4824 2.0 4.5 3.2 3.1 4851 chr3R 20854469 intron Ir93a - chr3R 20856894 intron Ir93a - chr3R 20859320 exon Ir93a - chr3R_13_20855001 chr3R_20855001 RAL-774_125 2267 chr3R 20899883 20899937 chr3R 20900029 20900083 6 145 0.5 3.5 2.0 2.0 200 chr3R 20899883 intergenic not near genes chr3R 20899983 intergenic not near genes chr3R 20900083 intergenic not near genes chr3R_6_20895001 chr3R_20895001 RAL-774_125 2268 chr3R 20921157 20921204 chr3R 20921282 20921334 17 135 8.0 6.0 7.0 2.1 177 chr3R 20921157 intron,intron CG31191 -,hdly + chr3R 20921246 intron,intron CG31191 -,hdly + chr3R 20921334 intron,intron CG31191 -,hdly + chr3R_17_20920001 chr3R_20920001 RAL-774_125 2269 chr3R 20936040 20936098 chr3R 20936167 20936225 9 126 2.0 3.0 2.5 2.6 185 chr3R 20936040 intron CG31191 - chr3R 20936132 intron CG31191 - chr3R 20936225 intron CG31191 - chr3R_9_20935001 chr3R_20935001 RAL-774_125 2270 chr3R 20995745 20995752 chr3R 20995907 20995914 4 162 0.5 0.0 0.2 3.3 169 chr3R 20995745 intron Calx + chr3R 20995830 intron Calx + chr3R 20995914 intron Calx + chr3R_4_20995001 chr3R_20995001 RAL-774_125 2271 chr3R 21046292 21046365 chr3R 21046454 21046527 7 158 4.0 3.5 3.8 1.5 235 chr3R 21046292 intron CG31207 - chr3R 21046410 exon CG31207 - chr3R 21046527 exon CG31207 - chr3R_7_21045001 chr3R_21045001 RAL-774_125 2272 chr3R 21108016 21108054 chr3R 21108327 21108360 5 304 3.0 4.0 3.5 1.1 344 chr3R 21108016 intergenic Sec15 -,rtet + chr3R 21108188 intergenic Sec15 -,rtet + chr3R 21108360 intergenic rtet +,Sec15 - chr3R_5_21105001 chr3R_21105001 RAL-774_125 2273 chr3R 21141630 21141706 chr3R 21150160 21150211 Tirant 7 8519 6.5 3.0 4.8 1.2 8581 chr3R 21141630 intron SNF4Agamma + chr3R 21145920 intron SNF4Agamma + chr3R 21150211 intron SNF4Agamma + chr3R_7_21145001 chr3R_21145001 RAL-774_125 2274 chr3R 21203685 21203728 chr3R 21203790 21203853 14 126 5.5 6.5 6.0 2.0 168 chr3R 21203685 intron SNF4Agamma + chr3R 21203769 intron SNF4Agamma + chr3R 21203853 intron SNF4Agamma + chr3R_14_21200001 chr3R_21200001 RAL-774_125 2275 chr3R 21236422 21236498 chr3R 21236549 21236601 13 122 6.0 7.5 6.8 1.7 179 chr3R 21236422 intron e - chr3R 21236512 intron e - chr3R 21236601 intron e - chr3R_13_21235001 chr3R_21235001 RAL-774_125 2276 chr3R 21322927 21323006 chr3R 21323056 21323138 8 123 2.5 1.5 2.0 2.7 211 chr3R 21322927 exon CG16791 - chr3R 21323032 intron CG16791 - chr3R 21323138 intron CG16791 - chr3R_8_21320001 chr3R_21320001 RAL-774_125 2277 chr3R 21383280 21383301 chr3R 21383408 21383431 7 129 1.5 2.5 2.0 2.3 151 chr3R 21383280 intergenic not near genes chr3R 21383356 intergenic not near genes chr3R 21383431 intergenic not near genes chr3R_7_21380001 chr3R_21380001 RAL-774_125 2278 chr3R 21385653 21385946 chr3R 21385780 21386073 18 123 2.5 0.5 1.5 7.2 420 chr3R 21385653 intergenic not near genes chr3R 21385863 intergenic not near genes chr3R 21386073 intergenic not near genes chr3R_18_21385001 chr3R_21385001 RAL-774_125 2279 chr3R 21393406 21393485 chr3R 21393578 21393638 4 158 4.0 0.0 2.0 1.3 232 chr3R 21393406 intergenic not near genes chr3R 21393522 intergenic not near genes chr3R 21393638 intergenic not near genes chr3R_4_21390001 chr3R_21390001 RAL-774_125 2280 chr3R 21408816 21408874 chr3R 21408945 21408991 6 127 1.0 6.0 3.5 1.3 175 chr3R 21408816 intergenic CheB93b +,CheB93a + chr3R 21408904 intergenic CheB93b + chr3R 21408991 intergenic CheB93b + chr3R_6_21405001 chr3R_21405001 RAL-774_125 2281 chr3R 21464404 21464425 chr3R 21464538 21464559 5 134 1.5 2.5 2.0 1.7 155 chr3R 21464404 intergenic not near genes chr3R 21464482 intergenic not near genes chr3R 21464559 intergenic not near genes chr3R_5_21460001 chr3R_21460001 RAL-774_125 2282 chr3R 21471986 21472027 chr3R 21472101 21472158 15 127 7.0 6.5 6.8 1.9 172 chr3R 21471986 intergenic not near genes chr3R 21472072 intergenic not near genes chr3R 21472158 intergenic not near genes chr3R_15_21470001 chr3R_21470001 RAL-774_125 2283 chr3R 21517980 21518269 chr3R 21518159 21518403 10 146 0.0 0.0 0.0 10.0 423 chr3R 21517980 intergenic not near genes chr3R 21518192 intergenic not near genes chr3R 21518403 intergenic not near genes chr3R_10_21515001 chr3R_21515001 RAL-774_125 2284 chr3R 21519970 21520124 chr3R 21520088 21520268 12 150 0.0 0.0 0.0 12.0 298 chr3R 21519970 intergenic not near genes chr3R 21520119 intergenic not near genes chr3R 21520268 intergenic not near genes chr3R_12_21520001 chr3R_21520001 RAL-774_125 2285 chr3R 21535311 21535367 chr3R 21535477 21535532 9 164 6.0 0.5 3.2 2.1 221 chr3R 21535311 5` UTR CR44033 + chr3R 21535422 intergenic CR44033 + chr3R 21535532 intergenic CR44033 + chr3R_9_21535001 chr3R_21535001 RAL-774_125 2286 chr3R 21600486 21600543 chr3R 21600973 21601033 16 491 7.5 5.5 6.5 2.1 547 chr3R 21600486 intron InR - chr3R 21600760 intron InR - chr3R 21601033 intron InR - chr3R_16_21600001 chr3R_21600001 RAL-774_125 2287 chr3R 21624062 21624116 chr3R 21624206 21624255 9 142 3.0 4.0 3.5 2.0 193 chr3R 21624062 exon E2f - chr3R 21624158 intron E2f - chr3R 21624255 intron E2f - chr3R_9_21620001 chr3R_21620001 RAL-774_125 2288 chr3R 21751144 21751211 chr3R 21753890 21753957 11 2754 34.0 30.0 32.0 0.3 2813 chr3R 21751144 exon CG31233 + chr3R 21752550 exon CG31233 + chr3R 21753957 intergenic CG31198 + chr3R_11_21750001 chr3R_21750001 RAL-774_125 2289 chr3R 21761116 21761141 chr3R 21768543 21768573 mdg1 8 7427 4.0 4.0 4.0 1.6 7457 chr3R 21761116 exon CG42335 + chr3R 21764844 intron CG42335 + chr3R 21768573 exon CG42335 + chr3R_8_21760001 chr3R_21760001 RAL-774_125 2290 chr3R 21815069 21815096 chr3R 21815176 21815218 10 120 1.5 5.5 3.5 2.2 149 chr3R 21815069 intron CASK - chr3R 21815144 intron CASK - chr3R 21815218 intron CASK - chr3R_10_21815001 chr3R_21815001 RAL-774_125 2291 chr3R 21883929 21883986 chr3R 21884052 21884113 13 125 1.5 1.5 1.5 5.2 184 chr3R 21883929 intron,3` UTR,3` UTR CR45046 -,CG31465 +,fit - chr3R 21884021 intron,3` UTR CR45046 -,fit - chr3R 21884113 exon fit - chr3R_13_21880001 chr3R_21880001 RAL-774_125 2292 chr3R 21903493 21903635 chr3R 21903623 21903782 5 140 0.0 0.0 0.0 5.0 289 chr3R 21903493 intron CG6678 + chr3R 21903638 intron CG6678 + chr3R 21903782 intron CG6678 + chr3R_5_21900001 chr3R_21900001 RAL-774_125 2293 chr3R 21907534 21907534 chr3R 28831801 28831802 22 6924268 21.5 19.0 20.2 1.0 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_22_25365001 chr3R_25365001 RAL-774_125 2294 chr3R 8339246 8339247 chr3R 21907535 21907535 4 13568288 16.5 22.0 19.2 0.2 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-774_125 2295 chr3R 21907535 21907535 chr3R 28831801 28831802 14 6924267 21.5 19.0 20.2 0.7 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_14_25365001 chr3R_25365001 RAL-774_125 2296 chr3R 21907536 21907536 chr3R 28831801 28831802 23 6924266 21.5 19.0 20.2 1.1 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_23_25365001 chr3R_25365001 RAL-774_125 2297 chr3R 21944376 21944399 chr3R 21944482 21944523 7 121 4.5 3.5 4.0 1.4 147 chr3R 21944376 intergenic not near genes chr3R 21944450 intergenic not near genes chr3R 21944523 intergenic not near genes chr3R_7_21940001 chr3R_21940001 RAL-774_125 2298 chr3R 22055517 22055589 chr3R 22055747 22055828 14 233 2.5 3.0 2.8 3.7 311 chr3R 22055517 intron how + chr3R 22055672 intron how + chr3R 22055828 intron how + chr3R_14_22055001 chr3R_22055001 RAL-774_125 2299 chr3R 22081509 22081558 chr3R 22081630 22081680 6 124 4.0 5.0 4.5 1.1 171 chr3R 22081509 intron CG13408 + chr3R 22081594 intron CG13408 + chr3R 22081680 intron CG13408 + chr3R_6_22080001 chr3R_22080001 RAL-774_125 2300 chr3R 22117376 22117441 chr3R 22117502 22117567 18 124 8.0 7.0 7.5 2.1 191 chr3R 22117376 intergenic Ir94b -,Ir94c - chr3R 22117472 intergenic Ir94c -,Ir94b - chr3R 22117567 intergenic Ir94c -,Ir94b - chr3R_18_22115001 chr3R_22115001 RAL-774_125 2301 chr3R 22142177 22142221 chr3R 22142300 22142342 7 124 1.5 4.5 3.0 1.8 165 chr3R 22142177 5` UTR SKIP + chr3R 22142260 intron SKIP + chr3R 22142342 intron SKIP + chr3R_7_22140001 chr3R_22140001 RAL-774_125 2302 chr3R 22239494 22239515 chr3R 22248592 22248612 roo 4 9098 2.0 3.0 2.5 1.1 9118 chr3R 22239494 intron SKIP + chr3R 22244053 intron SKIP + chr3R 22248612 intron SKIP + chr3R_4_22240001 chr3R_22240001 RAL-774_125 2303 chr3R 22258383 22258393 chr3R 22258536 22258546 4 152 9.0 5.0 7.0 0.5 163 chr3R 22258383 intron SKIP + chr3R 22258464 intron SKIP + chr3R 22258546 intron SKIP + chr3R_4_22255001 chr3R_22255001 RAL-774_125 2304 chr3R 22272314 22272360 chr3R 22272446 22272492 7 130 3.5 3.0 3.2 1.7 178 chr3R 22272314 intron SKIP + chr3R 22272403 intron SKIP + chr3R 22272492 intron SKIP + chr3R_7_22270001 chr3R_22270001 RAL-774_125 2305 chr3R 22328897 22328943 chr3R 22331546 22331592 8 2650 28.5 29.5 29.0 0.3 2695 chr3R 22328897 intergenic CG7080 + chr3R 22330244 exon CG7080 + chr3R 22331592 intron CG33721 + chr3R_8_22330001 chr3R_22330001 RAL-774_125 2306 chr3R 22336889 22336921 chr3R 22337021 22337053 5 132 6.5 6.0 6.2 0.7 164 chr3R 22336889 intron CG5388 - chr3R 22336971 intron CG5388 - chr3R 22337053 intron CG5388 - chr3R_5_22335001 chr3R_22335001 RAL-774_125 2307 chr3R 22348920 22348984 chr3R 22349316 22349385 15 403 2.0 2.0 2.0 5.0 465 chr3R 22348920 intergenic not near genes chr3R 22349152 intergenic not near genes chr3R 22349385 intergenic not near genes chr3R_15_22345001 chr3R_22345001 RAL-774_125 2308 chr3R 22433059 22433087 chr3R 22433197 22433237 5 146 8.0 4.5 6.2 0.7 178 chr3R 22433059 intron CG13847 - chr3R 22433148 intron CG13847 - chr3R 22433237 intron CG13847 - chr3R_5_22430001 chr3R_22430001 RAL-774_125 2309 chr3R 22450500 22450570 chr3R 22453190 22453255 NOF 16 2684 3.0 5.0 4.0 3.2 2755 chr3R 22450500 intron CG34376 + chr3R 22451878 intron CG34376 + chr3R 22453255 intron CG34376 + chr3R_16_22450001 chr3R_22450001 RAL-774_125 2310 chr3R 22672259 22672316 chr3R 22672397 22672459 4 142 4.5 4.5 4.5 0.7 200 chr3R 22672259 intron wake + chr3R 22672359 intron wake + chr3R 22672459 intron wake + chr3R_4_22670001 chr3R_22670001 RAL-774_125 2311 chr3R 22684178 22684226 chr3R 22684285 22684327 10 118 4.0 4.0 4.0 2.0 149 chr3R 22684178 intergenic not near genes chr3R 22684252 intergenic not near genes chr3R 22684327 intergenic not near genes chr3R_10_22680001 chr3R_22680001 RAL-774_125 2312 chr3R 22797714 22797926 chr3R 22797850 22798072 20 137 0.0 0.0 0.0 20.0 358 chr3R 22797714 intergenic not near genes chr3R 22797893 intergenic not near genes chr3R 22798072 intergenic not near genes chr3R_20_22795001 chr3R_22795001 RAL-774_125 2313 chr3R 22853243 22853296 chr3R 22853370 22853423 7 123 5.5 5.0 5.2 1.1 180 chr3R 22853243 intergenic not near genes chr3R 22853333 intergenic not near genes chr3R 22853423 intergenic not near genes chr3R_7_22850001 chr3R_22850001 RAL-774_125 2314 chr3R 22860106 22860176 chr3R 22860248 22860304 10 139 1.5 3.0 2.2 3.1 198 chr3R 22860106 intergenic not near genes chr3R 22860205 intergenic not near genes chr3R 22860304 intergenic not near genes chr3R_10_22860001 chr3R_22860001 RAL-774_125 2315 chr3R 22881183 22881207 chr3R 22884939 22884963 Doc 6 3754 1.5 9.5 5.5 0.9 3780 chr3R 22881183 intergenic not near genes chr3R 22883073 intergenic not near genes chr3R 22884963 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-774_125 2316 chr3R 22893510 22893561 chr3R 22893654 22893677 12 138 4.0 4.0 4.0 2.4 167 chr3R 22893510 intergenic not near genes chr3R 22893594 intergenic not near genes chr3R 22893677 intergenic not near genes chr3R_12_22890001 chr3R_22890001 RAL-774_125 2317 chr3R 22974264 22974308 chr3R 22974387 22974436 7 124 1.0 3.5 2.2 2.2 172 chr3R 22974264 intergenic not near genes chr3R 22974350 intergenic not near genes chr3R 22974436 intergenic not near genes chr3R_7_22970001 chr3R_22970001 RAL-774_125 2318 chr3R 22993461 22993502 chr3R 22993645 22993650 8 179 3.0 5.0 4.0 1.6 189 chr3R 22993461 intron Nha2 - chr3R 22993556 intron Nha2 - chr3R 22993650 intron Nha2 - chr3R_8_22990001 chr3R_22990001 RAL-774_125 2319 chr3R 23011339 23011357 chr3R 23011478 23011503 5 142 13.0 7.0 10.0 0.5 164 chr3R 23011339 intergenic not near genes chr3R 23011421 intergenic CR44225 - chr3R 23011503 intergenic CR44225 - chr3R_5_23010001 chr3R_23010001 RAL-774_125 2320 chr3R 23070631 23070664 chr3R 23070768 23070802 5 138 3.0 3.5 3.2 1.2 171 chr3R 23070631 3` UTR CG13830 - chr3R 23070716 3` UTR CG13830 - chr3R 23070802 3` UTR CG13830 - chr3R_5_23070001 chr3R_23070001 RAL-774_125 2321 chr3R 23073627 23073685 chr3R 23073751 23073789 9 124 2.0 1.5 1.8 3.2 162 chr3R 23073627 intron CG13830 - chr3R 23073708 intron CG13830 - chr3R 23073789 intron CG13830 - chr3R_9_23070001 chr3R_23070001 RAL-774_125 2322 chr3R 23101351 23101410 chr3R 23101484 23101529 13 127 3.5 2.5 3.0 3.2 178 chr3R 23101351 intron CG13830 - chr3R 23101440 intron CG13830 - chr3R 23101529 intron CG13830 - chr3R_13_23100001 chr3R_23100001 RAL-774_125 2323 chr3R 23110830 23110900 chr3R 23111047 23111117 12 213 4.5 3.0 3.8 2.5 287 chr3R 23110830 intron CG13830 - chr3R 23110974 intron CG13830 - chr3R 23111117 intron CG13830 - chr3R_12_23110001 chr3R_23110001 RAL-774_125 2324 chr3R 23197913 23197982 chr3R 23198042 23198111 14 128 1.5 4.0 2.8 3.7 198 chr3R 23197913 exon cnc - chr3R 23198012 intron cnc - chr3R 23198111 intron cnc - chr3R_14_23195001 chr3R_23195001 RAL-774_125 2325 chr3R 23210612 23210652 chr3R 23210746 23210772 7 132 7.5 3.0 5.2 1.1 160 chr3R 23210612 intron cnc - chr3R 23210692 intron cnc - chr3R 23210772 intron cnc - chr3R_7_23210001 chr3R_23210001 RAL-774_125 2326 chr3R 23291221 23291246 chr3R 23291324 23291377 10 117 2.5 3.5 3.0 2.5 156 chr3R 23291221 3` UTR pnt - chr3R 23291299 3` UTR pnt - chr3R 23291377 exon pnt - chr3R_10_23290001 chr3R_23290001 RAL-774_125 2327 chr3R 23319660 23319674 chr3R 23319789 23319799 6 128 0.0 4.0 2.0 2.0 139 chr3R 23319660 intron pnt - chr3R 23319730 intron pnt - chr3R 23319799 intron pnt - chr3R_6_23315001 chr3R_23315001 RAL-774_125 2328 chr3R 23335406 23335466 chr3R 23335523 23335582 13 117 2.5 2.5 2.5 3.7 176 chr3R 23335406 intron pnt - chr3R 23335494 intron pnt - chr3R 23335582 intron pnt - chr3R_13_23335001 chr3R_23335001 RAL-774_125 2329 chr3R 23356965 23356984 chr3R 23357101 23357120 4 136 7.5 3.5 5.5 0.6 155 chr3R 23356965 intron Sec13 + chr3R 23357042 intron Sec13 + chr3R 23357120 intron Sec13 + chr3R_4_23355001 chr3R_23355001 RAL-774_125 2330 chr3R 23390922 23390933 chr3R 23391054 23391054 5 129 6.0 0.0 3.0 1.2 132 chr3R 23390922 intergenic CR43387 + chr3R 23390988 intergenic CR43387 + chr3R 23391054 intergenic CR43387 + chr3R_5_23390001 chr3R_23390001 RAL-774_125 2331 chr3R 23497905 23497974 chr3R 23498035 23498062 4 118 3.0 6.0 4.5 0.7 157 chr3R 23497905 intergenic not near genes chr3R 23497984 intergenic not near genes chr3R 23498062 intergenic not near genes chr3R_4_23495001 chr3R_23495001 RAL-774_125 2332 chr3R 23558354 23558357 chr3R 23560185 23560188 Bari1 4 1831 11.0 2.0 6.5 0.5 1834 chr3R 23558354 intron beat-IV + chr3R 23559271 intron beat-IV + chr3R 23560188 intron beat-IV + chr3R_4_23555001 chr3R_23555001 RAL-774_125 2333 chr3R 23558358 23558418 chr3R 23560184 23560243 Bari1 15 1828 4.0 2.0 3.0 3.8 1885 chr3R 23558358 intron beat-IV + chr3R 23559300 intron beat-IV + chr3R 23560243 intron beat-IV + chr3R_15_23555001 chr3R_23555001 RAL-774_125 2334 chr3R 23598560 23598629 chr3R 23598742 23598804 18 179 4.0 7.5 5.8 2.6 244 chr3R 23598560 exon CG10183 - chr3R 23598682 exon CG10183 - chr3R 23598804 exon CG10183 - chr3R_18_23595001 chr3R_23595001 RAL-774_125 2335 chr3R 23668755 23668818 chr3R 23668884 23668920 13 124 6.0 4.5 5.2 2.1 165 chr3R 23668755 intron CG31145 - chr3R 23668838 intron CG31145 - chr3R 23668920 intron CG31145 - chr3R_13_23665001 chr3R_23665001 RAL-774_125 2336 chr3R 23684669 23684720 chr3R 23685180 23685240 roo 5 518 1.0 2.0 1.5 2.0 571 chr3R 23684669 exon CG18754 + chr3R 23684954 intron CG18754 + chr3R 23685240 exon CG18754 + chr3R_5_23680001 chr3R_23680001 RAL-774_125 2337 chr3R 23835368 23835407 chr3R 23844568 23844607 roo 8 9198 9.0 2.5 5.8 1.2 9239 chr3R 23835368 intron CG34355 + chr3R 23839988 intron CG34355 + chr3R 23844607 intron CG34355 + chr3R_8_23835001 chr3R_23835001 RAL-774_125 2338 chr3R 23851042 23851067 chr3R 23858759 23858784 opus 8 7717 0.0 3.5 1.8 2.9 7742 chr3R 23851042 3` UTR CG34355 + chr3R 23854913 intergenic not near genes chr3R 23858784 intergenic not near genes chr3R_8_23850001 chr3R_23850001 RAL-774_125 2339 chr3R 23864996 23865053 chr3R 23865125 23865192 16 138 6.0 5.0 5.5 2.5 196 chr3R 23864996 intron Pli - chr3R 23865094 intron Pli - chr3R 23865192 intron Pli - chr3R_16_23865001 chr3R_23865001 RAL-774_125 2340 chr3R 23888045 23888104 chr3R 23888180 23888235 11 130 6.5 3.0 4.8 1.9 190 chr3R 23888045 intron Pli - chr3R 23888140 intron Pli - chr3R 23888235 intron Pli - chr3R_11_23885001 chr3R_23885001 RAL-774_125 2341 chr3R 23944860 23944936 chr3R 23944995 23945061 10 131 2.0 4.0 3.0 2.5 201 chr3R 23944860 intron CG12268 - chr3R 23944960 intron CG12268 - chr3R 23945061 exon CG12268 - chr3R_10_23940001 chr3R_23940001 RAL-774_125 2342 chr3R 23959904 23959910 chr3R 23960201 23960202 4 296 9.5 4.0 6.8 0.5 298 chr3R 23959904 intron AP-1sigma + chr3R 23960053 intron AP-1sigma + chr3R 23960202 intron AP-1sigma + chr3R_4_23960001 chr3R_23960001 RAL-774_125 2343 chr3R 23959913 23959961 chr3R 23960198 23960258 11 294 5.0 4.0 4.5 2.0 345 chr3R 23959913 intron AP-1sigma + chr3R 23960086 intron AP-1sigma + chr3R 23960258 intron AP-1sigma + chr3R_11_23960001 chr3R_23960001 RAL-774_125 2344 chr3R 24011621 24011672 chr3R 24011754 24011805 9 132 3.5 3.0 3.2 2.1 184 chr3R 24011621 intron KrT95D - chr3R 24011713 intron KrT95D - chr3R 24011805 intron KrT95D - chr3R_9_24010001 chr3R_24010001 RAL-774_125 2345 chr3R 24072061 24072102 chr3R 24072528 24072580 jockey 14 476 5.5 4.5 5.0 2.3 519 chr3R 24072061 intron 4EHP - chr3R 24072320 intron 4EHP - chr3R 24072580 intron 4EHP - chr3R_14_24070001 chr3R_24070001 RAL-774_125 2346 chr3R 24076891 24076937 chr3R 24078402 24078454 hobo 15 1511 4.5 4.0 4.2 2.9 1563 chr3R 24076891 intron 4EHP - chr3R 24077672 intron 4EHP - chr3R 24078454 intron 4EHP - chr3R_15_24075001 chr3R_24075001 RAL-774_125 2347 chr3R 24199693 24199763 chr3R 24199823 24199887 7 127 2.5 4.5 3.5 1.6 194 chr3R 24199693 intron twin - chr3R 24199790 intron twin - chr3R 24199887 exon twin - chr3R_7_24195001 chr3R_24195001 RAL-774_125 2348 chr3R 24207188 24207233 chr3R 24212307 24212359 flea 4 5117 7.0 6.5 6.8 0.5 5171 chr3R 24207188 intron twin - chr3R 24209774 intron twin - chr3R 24212359 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-774_125 2349 chr3R 24431555 24431616 chr3R 24431679 24431736 13 125 3.0 0.0 1.5 5.2 181 chr3R 24431555 intron nAChRalpha1 - chr3R 24431646 intron nAChRalpha1 - chr3R 24431736 intron nAChRalpha1 - chr3R_13_24430001 chr3R_24430001 RAL-774_125 2350 chr3R 24433428 24433504 chr3R 24433557 24433633 14 125 1.5 6.5 4.0 2.8 205 chr3R 24433428 intron nAChRalpha1 - chr3R 24433530 intron nAChRalpha1 - chr3R 24433633 intron nAChRalpha1 - chr3R_14_24430001 chr3R_24430001 RAL-774_125 2351 chr3R 24464215 24464270 chr3R 24464521 24464580 4 312 5.5 3.5 4.5 0.7 365 chr3R 24464215 intergenic CR45649 - chr3R 24464398 intergenic CR45649 - chr3R 24464580 intergenic not near genes chr3R_4_24460001 chr3R_24460001 RAL-774_125 2352 chr3R 24493243 24493296 chr3R 24493517 24493575 BS 10 275 4.5 3.0 3.8 2.1 332 chr3R 24493243 intergenic not near genes chr3R 24493409 intergenic not near genes chr3R 24493575 intergenic not near genes chr3R_10_24490001 chr3R_24490001 RAL-774_125 2353 chr3R 24525755 24525828 chr3R 24525885 24525948 12 126 10.5 7.0 8.8 1.2 193 chr3R 24525755 intron CG13618 + chr3R 24525852 intron CG13618 + chr3R 24525948 intron CG13618 + chr3R_12_24525001 chr3R_24525001 RAL-774_125 2354 chr3R 24527771 24527822 chr3R 24527912 24527963 6 138 3.0 1.0 2.0 2.0 192 chr3R 24527771 intergenic CG13618 +,CG6607 + chr3R 24527867 intergenic CG6607 +,CG13618 + chr3R 24527963 intergenic CG6607 +,CG13618 + chr3R_6_24525001 chr3R_24525001 RAL-774_125 2355 chr3R 24594634 24594665 chr3R 24594924 24594955 pogo 6 284 5.0 8.5 6.8 0.8 321 chr3R 24594634 intron mld + chr3R 24594794 intron mld + chr3R 24594955 intron mld + chr3R_6_24590001 chr3R_24590001 RAL-774_125 2356 chr3R 24605509 24605557 chr3R 24605650 24605672 11 135 7.0 6.0 6.5 1.5 163 chr3R 24605509 intron mld + chr3R 24605590 intron mld + chr3R 24605672 intron mld + chr3R_11_24605001 chr3R_24605001 RAL-774_125 2357 chr3R 24667564 24667609 chr3R 24667691 24667710 5 122 3.0 0.0 1.5 2.0 146 chr3R 24667564 intron slo + chr3R 24667637 intron slo + chr3R 24667710 intron slo + chr3R_5_24665001 chr3R_24665001 RAL-774_125 2358 chr3R 24670008 24670162 chr3R 24670167 24670297 9 167 0.0 0.0 0.0 9.0 289 chr3R 24670008 intron slo + chr3R 24670152 intron slo + chr3R 24670297 intron slo + chr3R_9_24670001 chr3R_24670001 RAL-774_125 2359 chr3R 24671184 24671253 chr3R 24671299 24671365 13 114 3.0 8.5 5.8 1.9 181 chr3R 24671184 intron slo + chr3R 24671274 intron slo + chr3R 24671365 intron slo + chr3R_13_24670001 chr3R_24670001 RAL-774_125 2360 chr3R 24730065 24730115 chr3R 24732480 24732550 Doc 6 2420 2.0 0.0 1.0 3.0 2485 chr3R 24730065 intron tok + chr3R 24731308 intron tok + chr3R 24732550 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-774_125 2361 chr3R 24742994 24743057 chr3R 24743129 24743187 8 134 1.5 6.5 4.0 1.6 193 chr3R 24742994 intron tok + chr3R 24743090 intron tok + chr3R 24743187 exon tok + chr3R_8_24740001 chr3R_24740001 RAL-774_125 2362 chr3R 24789933 24790004 chr3R 24790128 24790193 15 188 2.5 3.0 2.8 3.9 260 chr3R 24789933 intron,5` UTR Ets96B +,CG13634 - chr3R 24790063 intron,5` UTR Ets96B +,CG13634 - chr3R 24790193 intron Ets96B + chr3R_15_24790001 chr3R_24790001 RAL-774_125 2363 chr3R 24854255 24854321 chr3R 24854390 24854462 13 138 8.0 4.0 6.0 1.9 207 chr3R 24854255 3` UTR nct + chr3R 24854358 3` UTR nct + chr3R 24854462 3` UTR nct + chr3R_13_24850001 chr3R_24850001 RAL-774_125 2364 chr3R 24927085 24927139 chr3R 24931926 24931946 Doc 11 4836 5.0 3.5 4.2 2.1 4861 chr3R 24927085 3` UTR Trf4-2 + chr3R 24929516 intergenic not near genes chr3R 24931946 intergenic CG11771 + chr3R_11_24925001 chr3R_24925001 RAL-774_125 2365 chr3R 25004858 25004905 chr3R 25004991 25005038 6 132 2.0 4.0 3.0 1.5 180 chr3R 25004858 intron tnc + chr3R 25004948 intron tnc + chr3R 25005038 intron tnc + chr3R_6_25000001 chr3R_25000001 RAL-774_125 2366 chr3R 25053073 25053156 chr3R 25053216 25053290 14 144 1.0 6.5 3.8 2.9 217 chr3R 25053073 3` UTR CG11791 + chr3R 25053182 intergenic CG11791 +,CG31109 - chr3R 25053290 intergenic CG31109 -,CG11791 + chr3R_14_25050001 chr3R_25050001 RAL-774_125 2367 chr3R 25125994 25126049 chr3R 25126638 25126682 4 641 23.0 24.5 23.8 0.2 688 chr3R 25125994 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126338 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126682 3` UTR,exon CG42503 -,Mocs2 - chr3R_4_25125001 chr3R_25125001 RAL-774_125 2368 chr3R 25136361 25136425 chr3R 25136486 25136555 6 128 4.0 2.5 3.2 1.4 194 chr3R 25136361 3` UTR Bili + chr3R 25136458 3` UTR Bili + chr3R 25136555 3` UTR Bili + chr3R_6_25135001 chr3R_25135001 RAL-774_125 2369 chr3R 25235780 25235841 chr3R 25235910 25235971 10 129 1.5 4.0 2.8 2.6 191 chr3R 25235780 intergenic CG10420 - chr3R 25235876 intergenic CG10420 - chr3R 25235971 intergenic CG10420 - chr3R_10_25235001 chr3R_25235001 RAL-774_125 2370 chr3R 25247595 25247667 chr3R 25247765 25247832 14 169 4.5 8.0 6.2 1.9 237 chr3R 25247595 intergenic Nup37 +,RpS27 - chr3R 25247714 5` UTR Nup37 + chr3R 25247832 intron Nup37 + chr3R_14_25245001 chr3R_25245001 RAL-774_125 2371 chr3R 25360502 25360555 chr3R 25360744 25360797 8 240 7.0 2.5 4.8 1.4 295 chr3R 25360502 intron Fur1 - chr3R 25360650 intron Fur1 - chr3R 25360797 intron Fur1 - chr3R_8_25360001 chr3R_25360001 RAL-774_125 2372 chr3R 25368433 25368505 chr3R 25368601 25368677 8 170 3.5 0.0 1.8 2.9 244 chr3R 25368433 intron Fur1 - chr3R 25368555 intron Fur1 - chr3R 25368677 intron Fur1 - chr3R_8_25365001 chr3R_25365001 RAL-774_125 2373 chr3R 25405383 25405390 chr3R 25405494 25405515 5 119 9.5 8.0 8.8 0.5 132 chr3R 25405383 intron Fur1 - chr3R 25405449 intron Fur1 - chr3R 25405515 intron Fur1 - chr3R_5_25405001 chr3R_25405001 RAL-774_125 2374 chr3R 25422028 25422093 chr3R 25422147 25422242 12 134 4.0 1.0 2.5 3.4 214 chr3R 25422028 intron Fur1 - chr3R 25422135 intron Fur1 - chr3R 25422242 intron Fur1 - chr3R_12_25420001 chr3R_25420001 RAL-774_125 2375 chr3R 25431381 25431434 chr3R 25431515 25431548 6 132 5.0 4.5 4.8 1.0 167 chr3R 25431381 intron Fur1 - chr3R 25431464 intron Fur1 - chr3R 25431548 intron Fur1 - chr3R_6_25430001 chr3R_25430001 RAL-774_125 2376 chr3R 25441806 25441871 chr3R 25442100 25442155 12 290 5.0 6.5 5.8 1.8 349 chr3R 25441806 intron Fur1 - chr3R 25441980 intron Fur1 - chr3R 25442155 intron Fur1 - chr3R_12_25440001 chr3R_25440001 RAL-774_125 2377 chr3R 25520949 25520982 chr3R 25521098 25521131 7 148 5.0 7.0 6.0 1.0 182 chr3R 25520949 intron msi + chr3R 25521040 intron msi + chr3R 25521131 intron msi + chr3R_7_25520001 chr3R_25520001 RAL-774_125 2378 chr3R 25551773 25551830 chr3R 25551900 25551957 8 125 4.0 6.0 5.0 1.3 184 chr3R 25551773 intron msi + chr3R 25551865 intron msi + chr3R 25551957 intron msi + chr3R_8_25550001 chr3R_25550001 RAL-774_125 2379 chr3R 25571851 25571866 chr3R 25571984 25572004 5 135 6.5 7.5 7.0 0.6 153 chr3R 25571851 intron msi + chr3R 25571928 intron msi + chr3R 25572004 intron msi + chr3R_5_25570001 chr3R_25570001 RAL-774_125 2380 chr3R 25604754 25604800 chr3R 25604889 25604942 14 137 6.5 4.5 5.5 2.2 188 chr3R 25604754 3` UTR,intron msi +,ymp - chr3R 25604848 3` UTR,intron msi +,ymp - chr3R 25604942 3` UTR,intron msi +,ymp - chr3R_14_25600001 chr3R_25600001 RAL-774_125 2381 chr3R 25720775 25720831 chr3R 25720912 25720961 10 136 1.0 5.0 3.0 2.5 186 chr3R 25720775 intron LpR2 - chr3R 25720868 intron LpR2 - chr3R 25720961 intron LpR2 - chr3R_10_25720001 chr3R_25720001 RAL-774_125 2382 chr3R 25725803 25725848 chr3R 25735013 25735058 roo 8 9209 5.0 5.0 5.0 1.3 9255 chr3R 25725803 intron LpR2 - chr3R 25730430 intron LpR2 - chr3R 25735058 intron LpR2 - chr3R_8_25730001 chr3R_25730001 RAL-774_125 2383 chr3R 25765831 25765845 chr3R 25765960 25765974 5 129 10.5 2.0 6.2 0.7 143 chr3R 25765831 intergenic not near genes chr3R 25765902 intergenic not near genes chr3R 25765974 intergenic not near genes chr3R_5_25765001 chr3R_25765001 RAL-774_125 2384 chr3R 25765847 25765908 chr3R 25765956 25766002 15 116 4.0 1.5 2.8 3.9 155 chr3R 25765847 intergenic not near genes chr3R 25765924 intergenic not near genes chr3R 25766002 intergenic not near genes chr3R_15_25765001 chr3R_25765001 RAL-774_125 2385 chr3R 25801220 25801290 chr3R 25802249 25802324 14 1030 4.5 4.0 4.2 2.7 1104 chr3R 25801220 intergenic not near genes chr3R 25801772 intergenic not near genes chr3R 25802324 intergenic not near genes chr3R_14_25800001 chr3R_25800001 RAL-774_125 2386 chr3R 25832668 25832722 chr3R 25841884 25841942 roo 9 9227 4.0 8.5 6.2 1.2 9274 chr3R 25832668 exon alpha4GT2 + chr3R 25837305 intron alpha4GT2 + chr3R 25841942 exon alpha4GT2 + chr3R_9_25835001 chr3R_25835001 RAL-774_125 2387 chr3R 25905859 25905932 chr3R 25906104 25906157 14 240 5.5 6.5 6.0 2.0 298 chr3R 25905859 intron CR43259 - chr3R 25906008 intron CR43259 - chr3R 25906157 3` UTR CR43259 - chr3R_14_25905001 chr3R_25905001 RAL-774_125 2388 chr3R 25927478 25927531 chr3R 25927610 25927663 14 131 3.0 3.0 3.0 3.5 185 chr3R 25927478 intron CCAP-R - chr3R 25927570 intron CCAP-R - chr3R 25927663 intron CCAP-R - chr3R_14_25925001 chr3R_25925001 RAL-774_125 2389 chr3R 26166141 26166201 chr3R 26166272 26166337 12 134 5.5 7.5 6.5 1.6 196 chr3R 26166141 intergenic not near genes chr3R 26166239 intergenic not near genes chr3R 26166337 intergenic not near genes chr3R_12_26165001 chr3R_26165001 RAL-774_125 2390 chr3R 26235455 26235517 chr3R 26235574 26235639 9 123 1.0 4.0 2.5 2.6 184 chr3R 26235455 5` UTR CR42745 + chr3R 26235547 5` UTR CR42745 + chr3R 26235639 intron CR42745 + chr3R_9_26235001 chr3R_26235001 RAL-774_125 2391 chr3R 26241210 26241274 chr3R 26241351 26241405 17 138 3.5 6.0 4.8 2.9 195 chr3R 26241210 intron CR42745 + chr3R 26241308 intron CR42745 + chr3R 26241405 intron CR42745 + chr3R_17_26240001 chr3R_26240001 RAL-774_125 2392 chr3R 26263695 26263757 chr3R 26263877 26263911 10 174 5.0 5.0 5.0 1.7 216 chr3R 26263695 intron CG6154 + chr3R 26263803 intron CG6154 + chr3R 26263911 intron CG6154 + chr3R_10_26260001 chr3R_26260001 RAL-774_125 2393 chr3R 26294675 26294735 chr3R 26294803 26294863 11 125 4.5 6.5 5.5 1.7 188 chr3R 26294675 intergenic not near genes chr3R 26294769 intergenic not near genes chr3R 26294863 intergenic not near genes chr3R_11_26290001 chr3R_26290001 RAL-774_125 2394 chr3R 26296021 26296035 chr3R 26296139 26296149 4 120 4.5 3.5 4.0 0.8 128 chr3R 26296021 intergenic not near genes chr3R 26296085 intergenic not near genes chr3R 26296149 intergenic not near genes chr3R_4_26295001 chr3R_26295001 RAL-774_125 2395 chr3R 26307083 26307090 chr3R 26307249 26307261 4 170 7.5 2.0 4.8 0.7 178 chr3R 26307083 intergenic not near genes chr3R 26307172 intergenic not near genes chr3R 26307261 intergenic not near genes chr3R_4_26305001 chr3R_26305001 RAL-774_125 2396 chr3R 26314616 26314677 chr3R 26314811 26314871 11 190 1.0 3.5 2.2 3.4 255 chr3R 26314616 intergenic not near genes chr3R 26314744 intergenic not near genes chr3R 26314871 intergenic not near genes chr3R_11_26310001 chr3R_26310001 RAL-774_125 2397 chr3R 26376282 26376322 chr3R 26385492 26385527 roo 11 9207 9.0 0.5 4.8 1.9 9245 chr3R 26376282 intergenic not near genes chr3R 26380904 intergenic not near genes chr3R 26385527 intergenic not near genes chr3R_11_26380001 chr3R_26380001 RAL-774_125 2398 chr3R 26405873 26405929 chr3R 26405999 26406050 6 124 0.0 0.0 0.0 6.0 177 chr3R 26405873 intergenic not near genes chr3R 26405962 intergenic not near genes chr3R 26406050 intergenic not near genes chr3R_6_26405001 chr3R_26405001 RAL-774_125 2399 chr3R 26490815 26490872 chr3R 26490959 26491016 10 144 3.5 1.5 2.5 2.9 201 chr3R 26490815 intron plum - chr3R 26490916 intron plum - chr3R 26491016 intron plum - chr3R_10_26490001 chr3R_26490001 RAL-774_125 2400 chr3R 26510479 26510535 chr3R 26519584 26519627 roo 11 9103 3.5 5.5 4.5 2.0 9148 chr3R 26510479 intron plum - chr3R 26515053 intron plum - chr3R 26519627 intron,5` UTR plum -,CR45226 + chr3R_11_26515001 chr3R_26515001 RAL-774_125 2401 chr3R 26540963 26541023 chr3R 26541083 26541152 7 125 1.5 3.5 2.5 2.0 189 chr3R 26540963 intron scrib + chr3R 26541058 intron scrib + chr3R 26541152 intron scrib + chr3R_7_26540001 chr3R_26540001 RAL-774_125 2402 chr3R 26542004 26542075 chr3R 26542145 26542201 15 130 3.5 4.0 3.8 3.1 197 chr3R 26542004 intron scrib + chr3R 26542102 intron scrib + chr3R 26542201 intron scrib + chr3R_15_26540001 chr3R_26540001 RAL-774_125 2403 chr3R 26558294 26558323 chr3R 26565646 26565678 Stalker4 5 7355 8.5 2.5 5.5 0.8 7384 chr3R 26558294 intron scrib + chr3R 26561986 intron scrib + chr3R 26565678 intron scrib + chr3R_5_26560001 chr3R_26560001 RAL-774_125 2404 chr3R 26568071 26568089 chr3R 26568162 26568220 4 118 0.5 9.0 4.8 0.7 149 chr3R 26568071 intron scrib + chr3R 26568146 intron scrib + chr3R 26568220 intron scrib + chr3R_4_26565001 chr3R_26565001 RAL-774_125 2405 chr3R 26574965 26575038 chr3R 26575088 26575161 16 125 1.5 2.0 1.8 5.7 196 chr3R 26574965 exon scrib + chr3R 26575063 intron scrib + chr3R 26575161 intron scrib + chr3R_16_26575001 chr3R_26575001 RAL-774_125 2406 chr3R 26611300 26611373 chr3R 26611426 26611487 19 122 4.0 4.0 4.0 3.8 187 chr3R 26611300 intergenic not near genes chr3R 26611394 intergenic not near genes chr3R 26611487 intergenic not near genes chr3R_19_26610001 chr3R_26610001 RAL-774_125 2407 chr3R 26641590 26641607 chr3R 26641727 26641734 5 135 9.5 6.0 7.8 0.6 144 chr3R 26641590 intergenic not near genes chr3R 26641662 intergenic not near genes chr3R 26641734 intergenic not near genes chr3R_5_26640001 chr3R_26640001 RAL-774_125 2408 chr3R 26641612 26641661 chr3R 26641723 26641773 10 126 4.0 6.0 5.0 1.7 161 chr3R 26641612 intergenic not near genes chr3R 26641692 intergenic not near genes chr3R 26641773 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-774_125 2409 chr3R 26642694 26642749 chr3R 26643136 26643180 jockey 12 440 9.5 6.0 7.8 1.4 486 chr3R 26642694 intergenic not near genes chr3R 26642937 intergenic not near genes chr3R 26643180 intergenic not near genes chr3R_12_26640001 chr3R_26640001 RAL-774_125 2410 chr3R 26668590 26668648 chr3R 26668704 26668765 16 116 6.0 3.5 4.8 2.8 175 chr3R 26668590 intron beat-VII - chr3R 26668678 intron beat-VII - chr3R 26668765 intron beat-VII - chr3R_16_26665001 chr3R_26665001 RAL-774_125 2411 chr3R 26685827 26685846 chr3R 26686051 26686069 7 227 8.0 6.0 7.0 0.9 242 chr3R 26685827 intergenic not near genes chr3R 26685948 intergenic not near genes chr3R 26686069 intergenic not near genes chr3R_7_26685001 chr3R_26685001 RAL-774_125 2412 chr3R 26685849 26685887 chr3R 26686046 26686082 11 219 4.0 5.5 4.8 1.9 233 chr3R 26685849 intergenic not near genes chr3R 26685966 intergenic not near genes chr3R 26686082 intergenic not near genes chr3R_11_26685001 chr3R_26685001 RAL-774_125 2413 chr3R 26740256 26740312 chr3R 26740376 26740432 4 120 3.5 4.0 3.8 0.8 176 chr3R 26740256 intergenic not near genes chr3R 26740344 intergenic not near genes chr3R 26740432 intergenic not near genes chr3R_4_26740001 chr3R_26740001 RAL-774_125 2414 chr3R 26743726 26743764 chr3R 26743858 26743870 9 133 9.0 1.0 5.0 1.5 144 chr3R 26743726 intergenic not near genes chr3R 26743798 intergenic not near genes chr3R 26743870 intergenic not near genes chr3R_9_26740001 chr3R_26740001 RAL-774_125 2415 chr3R 26755673 26755691 chr3R 26755794 26755797 4 118 3.5 2.5 3.0 1.0 124 chr3R 26755673 intergenic not near genes chr3R 26755735 intergenic not near genes chr3R 26755797 intergenic not near genes chr3R_4_26755001 chr3R_26755001 RAL-774_125 2416 chr3R 26755695 26755727 chr3R 26755789 26755848 8 113 2.5 2.5 2.5 2.3 153 chr3R 26755695 intergenic not near genes chr3R 26755772 intergenic not near genes chr3R 26755848 intergenic not near genes chr3R_8_26755001 chr3R_26755001 RAL-774_125 2417 chr3R 26759229 26759293 chr3R 26759575 26759634 5 339 6.5 4.0 5.2 0.8 405 chr3R 26759229 intergenic not near genes chr3R 26759432 intergenic not near genes chr3R 26759634 intergenic not near genes chr3R_5_26755001 chr3R_26755001 RAL-774_125 2418 chr3R 26810506 26810568 chr3R 26811041 26811076 roo 16 532 4.0 3.0 3.5 3.6 570 chr3R 26810506 intron Tl + chr3R 26810791 intron Tl + chr3R 26811076 intron Tl + chr3R_16_26810001 chr3R_26810001 RAL-774_125 2419 chr3R 26845537 26845597 chr3R 26845660 26845727 9 128 5.5 6.5 6.0 1.3 190 chr3R 26845537 intron Lerp - chr3R 26845632 intron Lerp - chr3R 26845727 intron Lerp - chr3R_9_26845001 chr3R_26845001 RAL-774_125 2420 chr3R 26898607 26898642 chr3R 26899031 26899066 5 419 1.0 4.0 2.5 1.4 459 chr3R 26898607 intron T48 + chr3R 26898836 intron T48 + chr3R 26899066 intron T48 + chr3R_5_26895001 chr3R_26895001 RAL-774_125 2421 chr3R 26927358 26927419 chr3R 26927564 26927628 14 204 4.5 5.5 5.0 2.3 270 chr3R 26927358 intron sda + chr3R 26927493 intron sda + chr3R 26927628 intron sda + chr3R_14_26925001 chr3R_26925001 RAL-774_125 2422 chr3R 27007365 27007428 chr3R 27016550 27016598 roo 10 9182 8.0 2.0 5.0 1.7 9233 chr3R 27007365 intron RYa-R + chr3R 27011982 intron RYa-R + chr3R 27016598 intron RYa-R + chr3R_10_27010001 chr3R_27010001 RAL-774_125 2423 chr3R 27028684 27028738 chr3R 27028807 27028862 10 125 1.5 3.0 2.2 3.1 178 chr3R 27028684 intron RYa-R + chr3R 27028773 intron RYa-R + chr3R 27028862 intron RYa-R + chr3R_10_27025001 chr3R_27025001 RAL-774_125 2424 chr3R 27030177 27030250 chr3R 27030356 27030421 15 175 2.0 0.0 1.0 7.5 244 chr3R 27030177 intron RYa-R + chr3R 27030299 intron RYa-R + chr3R 27030421 intron RYa-R + chr3R_15_27030001 chr3R_27030001 RAL-774_125 2425 chr3R 27101505 27101562 chr3R 27101661 27101718 17 155 2.5 6.5 4.5 3.1 213 chr3R 27101505 exon CG17189 + chr3R 27101612 intron CG17189 + chr3R 27101718 exon CG17189 + chr3R_17_27100001 chr3R_27100001 RAL-774_125 2426 chr3R 27107118 27107127 chr3R 27107392 27107401 5 273 12.0 11.0 11.5 0.4 283 chr3R 27107118 intergenic not near genes chr3R 27107260 intergenic not near genes chr3R 27107401 intergenic not near genes chr3R_5_27105001 chr3R_27105001 RAL-774_125 2427 chr3R 27107136 27107184 chr3R 27107385 27107448 14 267 4.5 9.5 7.0 1.8 312 chr3R 27107136 intergenic not near genes chr3R 27107292 intergenic not near genes chr3R 27107448 intergenic not near genes chr3R_14_27105001 chr3R_27105001 RAL-774_125 2428 chr3R 27140481 27140528 chr3R 27148129 27148182 412 11 7657 6.0 7.0 6.5 1.5 7701 chr3R 27140481 intron CG6051 - chr3R 27144332 intron CG6051 - chr3R 27148182 intron CG6051 - chr3R_11_27140001 chr3R_27140001 RAL-774_125 2429 chr3R 27153460 27153493 chr3R 27153588 27153621 5 128 3.5 4.0 3.8 1.0 161 chr3R 27153460 intron Men-b + chr3R 27153540 intron Men-b + chr3R 27153621 intron Men-b + chr3R_5_27150001 chr3R_27150001 RAL-774_125 2430 chr3R 27300488 27300531 chr3R 27300618 27300661 6 129 0.0 6.0 3.0 1.5 173 chr3R 27300488 intron CG3339 - chr3R 27300574 intron CG3339 - chr3R 27300661 intron CG3339 - chr3R_6_27300001 chr3R_27300001 RAL-774_125 2431 chr3R 27300814 27300851 chr3R 27300954 27300993 6 140 6.5 2.0 4.2 1.2 179 chr3R 27300814 intron CG3339 - chr3R 27300904 intron CG3339 - chr3R 27300993 intron CG3339 - chr3R_6_27300001 chr3R_27300001 RAL-774_125 2432 chr3R 27315945 27316005 chr3R 27316071 27316120 8 121 2.0 4.5 3.2 1.9 175 chr3R 27315945 intron CG3339 - chr3R 27316032 intron CG3339 - chr3R 27316120 exon CG3339 - chr3R_8_27315001 chr3R_27315001 RAL-774_125 2433 chr3R 27329448 27329493 chr3R 27329575 27329620 4 127 4.5 5.0 4.8 0.7 172 chr3R 27329448 intergenic CG3330 - chr3R 27329534 intergenic CG3330 - chr3R 27329620 intergenic CG3330 - chr3R_4_27325001 chr3R_27325001 RAL-774_125 2434 chr3R 27342768 27342820 chr3R 27351389 27351439 Tirant 11 8622 8.0 6.0 7.0 1.4 8671 chr3R 27342768 intron CG42534 + chr3R 27347104 intron CG42534 + chr3R 27351439 intron CG42534 + chr3R_11_27345001 chr3R_27345001 RAL-774_125 2435 chr3R 27377429 27377498 chr3R 27377567 27377636 12 130 2.5 3.5 3.0 3.0 207 chr3R 27377429 3` UTR side - chr3R 27377532 3` UTR side - chr3R 27377636 3` UTR side - chr3R_12_27375001 chr3R_27375001 RAL-774_125 2436 chr3R 27492342 27492410 chr3R 27492479 27492542 11 128 1.0 0.0 0.5 7.3 200 chr3R 27492342 intergenic not near genes chr3R 27492442 intergenic not near genes chr3R 27492542 intergenic not near genes chr3R_11_27490001 chr3R_27490001 RAL-774_125 2437 chr3R 27506249 27506283 chr3R 27506381 27506415 6 131 2.0 7.0 4.5 1.1 166 chr3R 27506249 intergenic not near genes chr3R 27506332 intergenic not near genes chr3R 27506415 intergenic not near genes chr3R_6_27505001 chr3R_27505001 RAL-774_125 2438 chr3R 27521122 27521177 chr3R 27530375 27530436 roo 11 9258 7.5 4.5 6.0 1.6 9314 chr3R 27521122 intron CG12885 + chr3R 27525779 intron CG12885 + chr3R 27530436 intron CG12885 + chr3R_11_27525001 chr3R_27525001 RAL-774_125 2439 chr3R 27578441 27578513 chr3R 27578575 27578618 10 126 6.0 2.5 4.2 1.9 177 chr3R 27578441 intron wdb - chr3R 27578530 intron wdb - chr3R 27578618 intron wdb - chr3R_10_27575001 chr3R_27575001 RAL-774_125 2440 chr3R 27619676 27619726 chr3R 27619820 27619900 11 145 4.0 1.0 2.5 3.1 224 chr3R 27619676 intron Tusp + chr3R 27619788 intron Tusp + chr3R 27619900 intron Tusp + chr3R_11_27615001 chr3R_27615001 RAL-774_125 2441 chr3R 27628547 27628596 chr3R 27628659 27628736 8 136 3.0 3.5 3.2 1.9 189 chr3R 27628547 intron Tusp + chr3R 27628642 intron Tusp + chr3R 27628736 intron Tusp + chr3R_8_27625001 chr3R_27625001 RAL-774_125 2442 chr3R 27660665 27660738 chr3R 27660793 27660864 8 124 4.0 7.0 5.5 1.2 199 chr3R 27660665 intergenic Mlc1 - chr3R 27660764 intergenic not near genes chr3R 27660864 intergenic not near genes chr3R_8_27660001 chr3R_27660001 RAL-774_125 2443 chr3R 27686761 27686824 chr3R 27686895 27686964 13 136 3.5 5.0 4.2 2.5 203 chr3R 27686761 intron,intron CG31055 -,CG12880 + chr3R 27686862 intron,intron CG31055 -,CG12880 + chr3R 27686964 exon,intron CG31055 -,CG12880 + chr3R_13_27685001 chr3R_27685001 RAL-774_125 2444 chr3R 27706736 27706792 chr3R 27706863 27706919 8 125 7.0 5.0 6.0 1.1 183 chr3R 27706736 5` UTR CG12428 - chr3R 27706828 intergenic CG12428 -,CG12877 + chr3R 27706919 intergenic CG12428 -,CG12877 + chr3R_8_27705001 chr3R_27705001 RAL-774_125 2445 chr3R 27725538 27725575 chr3R 27731030 27731067 I-element 4 5492 5.0 7.0 6.0 0.6 5529 chr3R 27725538 intergenic not near genes chr3R 27728302 intergenic not near genes chr3R 27731067 intergenic not near genes chr3R_4_27725001 chr3R_27725001 RAL-774_125 2446 chr3R 27799889 27799957 chr3R 27800021 27800089 13 126 3.0 4.0 3.5 2.9 200 chr3R 27799889 intron CG34353 - chr3R 27799989 intron CG34353 - chr3R 27800089 intron CG34353 - chr3R_13_27795001 chr3R_27795001 RAL-774_125 2447 chr3R 27806942 27806968 chr3R 27807759 27807804 4 823 5.5 3.0 4.2 0.8 862 chr3R 27806942 intron CG34353 - chr3R 27807373 intron CG34353 - chr3R 27807804 intron CG34353 - chr3R_4_27805001 chr3R_27805001 RAL-774_125 2448 chr3R 27823636 27823692 chr3R 27823757 27823827 6 131 5.0 2.5 3.8 1.2 191 chr3R 27823636 intron CG34353 - chr3R 27823732 intron CG34353 - chr3R 27823827 intron CG34353 - chr3R_6_27820001 chr3R_27820001 RAL-774_125 2449 chr3R 27856722 27856780 chr3R 27858255 27858313 hopper2 13 1527 4.5 7.5 6.0 1.9 1591 chr3R 27856722 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858313 intron CG34353 - chr3R_13_27855001 chr3R_27855001 RAL-774_125 2450 chr3R 27862930 27862984 chr3R 27868271 27868308 Transpac 11 5344 4.0 3.5 3.8 2.3 5378 chr3R 27862930 intron CG34353 - chr3R 27865619 intron CG34353 - chr3R 27868308 intron CG34353 - chr3R_11_27865001 chr3R_27865001 RAL-774_125 2451 chr3R 27875663 27875711 chr3R 27882762 27882816 297 11 7103 7.5 2.0 4.8 1.9 7153 chr3R 27875663 intron CG34353 - chr3R 27879240 intron CG34353 - chr3R 27882816 intron CG34353 - chr3R_11_27875001 chr3R_27875001 RAL-774_125 2452 chr3R 27973807 27973871 chr3R 27973938 27974002 15 130 4.5 8.5 6.5 2.0 195 chr3R 27973807 intron betaTub97EF - chr3R 27973904 intron betaTub97EF - chr3R 27974002 intron betaTub97EF - chr3R_15_27970001 chr3R_27970001 RAL-774_125 2453 chr3R 28017919 28017955 chr3R 28018048 28018071 6 125 3.5 3.5 3.5 1.3 152 chr3R 28017919 intergenic not near genes chr3R 28017995 intergenic not near genes chr3R 28018071 intergenic not near genes chr3R_6_28015001 chr3R_28015001 RAL-774_125 2454 chr3R 28017961 28017979 chr3R 28018042 28018114 4 120 2.0 2.5 2.2 1.2 153 chr3R 28017961 intergenic not near genes chr3R 28018038 intergenic not near genes chr3R 28018114 intergenic not near genes chr3R_4_28015001 chr3R_28015001 RAL-774_125 2455 chr3R 28068444 28068493 chr3R 28073936 28073979 I-element 4 5490 0.0 3.0 1.5 1.6 5535 chr3R 28068444 intron CG34362 + chr3R 28071212 intron CG34362 + chr3R 28073979 intron CG34362 + chr3R_4_28070001 chr3R_28070001 RAL-774_125 2456 chr3R 28152302 28152357 chr3R 28152427 28152484 12 124 6.5 4.0 5.2 1.9 182 chr3R 28152302 intron CG34354 + chr3R 28152393 intron CG34354 + chr3R 28152484 intron CG34354 + chr3R_12_28150001 chr3R_28150001 RAL-774_125 2457 chr3R 28173628 28173689 chr3R 28181102 28181169 mdg1 6 7477 3.5 1.5 2.5 1.7 7541 chr3R 28173628 intron CG34354 + chr3R 28177398 intron CG34354 + chr3R 28181169 intron CG34354 + chr3R_6_28175001 chr3R_28175001 RAL-774_125 2458 chr3R 28183100 28183139 chr3R 28183224 28183266 7 126 1.5 2.0 1.8 2.5 166 chr3R 28183100 intron CG34354 + chr3R 28183183 intron CG34354 + chr3R 28183266 intron CG34354 + chr3R_7_28180001 chr3R_28180001 RAL-774_125 2459 chr3R 28201859 28201914 chr3R 28201975 28202018 12 116 3.5 3.5 3.5 2.7 159 chr3R 28201859 intron CG34354 + chr3R 28201938 intron CG34354 + chr3R 28202018 intron CG34354 + chr3R_12_28200001 chr3R_28200001 RAL-774_125 2460 chr3R 28253341 28253357 chr3R 28255892 28255917 jockey 6 2558 6.0 8.5 7.2 0.7 2576 chr3R 28253341 intergenic not near genes chr3R 28254629 intergenic not near genes chr3R 28255917 intergenic not near genes chr3R_6_28250001 chr3R_28250001 RAL-774_125 2461 chr3R 28262626 28262682 chr3R 28262752 28262791 12 121 3.0 5.5 4.2 2.3 165 chr3R 28262626 intergenic CG43125 - chr3R 28262708 intergenic CG43125 - chr3R 28262791 exon CG43125 - chr3R_12_28260001 chr3R_28260001 RAL-774_125 2462 chr3R 28287031 28287088 chr3R 28287589 28287645 7 565 2.5 5.0 3.8 1.5 614 chr3R 28287031 intergenic not near genes chr3R 28287338 intergenic not near genes chr3R 28287645 intergenic not near genes chr3R_7_28285001 chr3R_28285001 RAL-774_125 2463 chr3R 28302068 28302116 chr3R 28302557 28302605 jockey 10 488 3.5 4.0 3.8 2.1 537 chr3R 28302068 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302605 intergenic not near genes chr3R_10_28300001 chr3R_28300001 RAL-774_125 2464 chr3R 28368953 28369007 chr3R 28369082 28369141 10 131 6.5 5.5 6.0 1.4 188 chr3R 28368953 intergenic not near genes chr3R 28369047 intergenic not near genes chr3R 28369141 intergenic not near genes chr3R_10_28365001 chr3R_28365001 RAL-774_125 2465 chr3R 28393654 28393723 chr3R 28393804 28393873 21 148 4.0 4.5 4.2 4.0 219 chr3R 28393654 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393873 intergenic not near genes chr3R_21_28390001 chr3R_28390001 RAL-774_125 2466 chr3R 28394020 28394097 chr3R 28394160 28394209 10 133 0.0 4.5 2.2 3.1 189 chr3R 28394020 intergenic not near genes chr3R 28394114 intergenic not near genes chr3R 28394209 intergenic not near genes chr3R_10_28390001 chr3R_28390001 RAL-774_125 2467 chr3R 28411073 28411140 chr3R 28411199 28411249 8 124 2.0 3.5 2.8 2.1 176 chr3R 28411073 intergenic not near genes chr3R 28411161 intergenic not near genes chr3R 28411249 intergenic not near genes chr3R_8_28410001 chr3R_28410001 RAL-774_125 2468 chr3R 28594097 28594122 chr3R 28594185 28594251 5 110 4.5 3.0 3.8 1.0 154 chr3R 28594097 5` UTR CR43440 + chr3R 28594174 5` UTR CR43440 + chr3R 28594251 5` UTR CR43440 + chr3R_5_28590001 chr3R_28590001 RAL-774_125 2469 chr3R 28616429 28616501 chr3R 28616572 28616645 18 143 6.0 5.0 5.5 2.8 216 chr3R 28616429 intron CG10011 - chr3R 28616537 intron CG10011 - chr3R 28616645 intron CG10011 - chr3R_18_28615001 chr3R_28615001 RAL-774_125 2470 chr3R 28712859 28712914 chr3R 28712993 28713049 9 140 4.5 0.0 2.2 2.8 190 chr3R 28712859 intron htt + chr3R 28712954 intron htt + chr3R 28713049 intron htt + chr3R_9_28710001 chr3R_28710001 RAL-774_125 2471 chr3R 28758272 28758310 chr3R 28771329 28771366 Stalker4 10 13057 5.0 1.5 3.2 2.4 13094 chr3R 28758272 intergenic aqrs - chr3R 28764819 intergenic not near genes chr3R 28771366 intergenic not near genes chr3R_10_28760001 chr3R_28760001 RAL-774_125 2472 chr3R 28792830 28792842 chr3R 28797968 28797974 jockey 4 5138 8.0 5.5 6.8 0.5 5144 chr3R 28792830 intergenic not near genes chr3R 28795402 intergenic not near genes chr3R 28797974 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-774_125 2473 chr3R 28792857 28792898 chr3R 28797966 28798038 jockey 18 5120 3.0 5.5 4.2 3.5 5181 chr3R 28792857 intergenic not near genes chr3R 28795448 intergenic not near genes chr3R 28798038 intergenic not near genes chr3R_18_28795001 chr3R_28795001 RAL-774_125 2474 chr3R 28823067 28823084 chr3R 28823186 28823211 6 124 10.0 7.0 8.5 0.6 144 chr3R 28823067 exon CG1647 + chr3R 28823139 exon CG1647 + chr3R 28823211 exon CG1647 + chr3R_6_28820001 chr3R_28820001 RAL-774_125 2475 chr3R 28823089 28823134 chr3R 28823184 28823225 12 101 4.0 6.5 5.2 1.9 136 chr3R 28823089 exon CG1647 + chr3R 28823157 exon CG1647 + chr3R 28823225 exon CG1647 + chr3R_12_28820001 chr3R_28820001 RAL-774_125 2476 chr3R 21907534 21907536 chr3R 28831801 28831802 52 6924266 21.5 19.0 20.2 2.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_52_25365001 chr3R_25365001 RAL-774_125 2477 chr3R 28922717 28922772 chr3R 28922843 28922898 6 126 3.0 0.0 1.5 2.4 181 chr3R 28922717 3` UTR Doa + chr3R 28922808 intergenic Doa +,CG11828 + chr3R 28922898 intergenic Doa +,CG11828 + chr3R_6_28920001 chr3R_28920001 RAL-774_125 2478 chr3R 28932759 28932811 chr3R 28933116 28933157 8 352 11.5 2.5 7.0 1.0 398 chr3R 28932759 intron CG14521 - chr3R 28932958 intron CG14521 - chr3R 28933157 intron CG14521 - chr3R_8_28930001 chr3R_28930001 RAL-774_125 2479 chr3R 28988988 28989011 chr3R 28989112 28989140 5 128 0.5 2.0 1.2 2.3 152 chr3R 28988988 intergenic not near genes chr3R 28989064 intergenic not near genes chr3R 28989140 intergenic not near genes chr3R_5_28985001 chr3R_28985001 RAL-774_125 2480 chr3R 29023860 29023921 chr3R 29023978 29024054 5 126 4.5 3.5 4.0 1.0 194 chr3R 29023860 5` UTR CR45567 + chr3R 29023957 5` UTR CR45567 + chr3R 29024054 5` UTR CR45567 + chr3R_5_29020001 chr3R_29020001 RAL-774_125 2481 chr3R 29079338 29079399 chr3R 29080760 29080821 NOF 14 1420 5.0 6.5 5.8 2.1 1483 chr3R 29079338 intron CG11873 + chr3R 29080080 intron CG11873 + chr3R 29080821 intron CG11873 + chr3R_14_29080001 chr3R_29080001 RAL-774_125 2482 chr3R 29096769 29096829 chr3R 29096895 29096908 8 115 3.0 1.0 2.0 2.7 139 chr3R 29096769 intron CG11873 + chr3R 29096838 intron CG11873 + chr3R 29096908 intron CG11873 + chr3R_8_29095001 chr3R_29095001 RAL-774_125 2483 chr3R 29213023 29213088 chr3R 29213155 29213221 13 133 5.0 5.5 5.2 2.1 198 chr3R 29213023 intergenic not near genes chr3R 29213122 intergenic not near genes chr3R 29213221 intergenic not near genes chr3R_13_29210001 chr3R_29210001 RAL-774_125 2484 chr3R 29237282 29237532 chr3R 29239327 29239475 4 1964 16.5 6.5 11.5 0.3 2193 chr3R 29237282 exon CG11951 - chr3R 29238378 intron CG11951 - chr3R 29239475 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-774_125 2485 chr3R 29239201 29239244 chr3R 29245526 29245585 4 6328 3.5 17.0 10.2 0.4 6384 chr3R 29239201 exon CG31427 - chr3R 29242393 exon CG31445 - chr3R 29245585 exon SP1029 - chr3R_4_29240001 chr3R_29240001 RAL-774_125 2486 chr3R 29240294 29240324 chr3R 29240418 29240449 5 128 4.0 1.5 2.8 1.3 155 chr3R 29240294 intron CG31427 - chr3R 29240372 intergenic CG31427 -,CG31445 - chr3R 29240449 intergenic CG31427 -,CG31445 - chr3R_5_29240001 chr3R_29240001 RAL-774_125 2487 chr3R 29249586 29249651 chr3R 29249711 29249773 8 129 1.5 2.0 1.8 2.9 187 chr3R 29249586 intron SP1029 - chr3R 29249680 intron SP1029 - chr3R 29249773 intron SP1029 - chr3R_8_29245001 chr3R_29245001 RAL-774_125 2488 chr3R 29249873 29249907 chr3R 29250012 29250039 4 137 3.0 6.5 4.8 0.7 166 chr3R 29249873 intron SP1029 - chr3R 29249956 intron SP1029 - chr3R 29250039 intron SP1029 - chr3R_4_29245001 chr3R_29245001 RAL-774_125 2489 chr3R 29265670 29265724 chr3R 29265824 29265872 15 150 3.0 2.5 2.8 3.9 202 chr3R 29265670 intergenic not near genes chr3R 29265771 intergenic not near genes chr3R 29265872 intergenic not near genes chr3R_15_29265001 chr3R_29265001 RAL-774_125 2490 chr3R 29319819 29319847 chr3R 29320188 29320211 jockey 7 368 2.0 7.5 4.8 1.2 392 chr3R 29319819 intergenic Cnx99A - chr3R 29320015 intergenic Cnx99A - chr3R 29320211 intergenic not near genes chr3R_7_29320001 chr3R_29320001 RAL-774_125 2491 chr3R 29376314 29376364 chr3R 29376452 29376502 10 136 3.0 0.0 1.5 4.0 188 chr3R 29376314 intergenic not near genes chr3R 29376408 intergenic not near genes chr3R 29376502 intergenic not near genes chr3R_10_29375001 chr3R_29375001 RAL-774_125 2492 chr3R 29384144 29384190 chr3R 29384261 29384300 11 116 6.0 3.0 4.5 2.0 156 chr3R 29384144 intron Ptp99A + chr3R 29384222 intron Ptp99A + chr3R 29384300 intron Ptp99A + chr3R_11_29380001 chr3R_29380001 RAL-774_125 2493 chr3R 29402946 29402995 chr3R 29403091 29403134 16 143 5.0 5.5 5.2 2.6 188 chr3R 29402946 intron Ptp99A + chr3R 29403040 intron Ptp99A + chr3R 29403134 intron Ptp99A + chr3R_16_29400001 chr3R_29400001 RAL-774_125 2494 chr3R 29406583 29406635 chr3R 29407919 29407926 jockey 7 1320 6.5 9.5 8.0 0.8 1343 chr3R 29406583 intron Ptp99A + chr3R 29407254 intron Ptp99A + chr3R 29407926 intron Ptp99A + chr3R_7_29405001 chr3R_29405001 RAL-774_125 2495 chr3R 29429741 29429802 chr3R 29429866 29429929 10 122 1.5 3.0 2.2 3.1 188 chr3R 29429741 intron Ptp99A + chr3R 29429835 intron Ptp99A + chr3R 29429929 intron Ptp99A + chr3R_10_29425001 chr3R_29425001 RAL-774_125 2496 chr3R 29471976 29472033 chr3R 29472102 29472176 7 136 4.0 1.5 2.8 1.8 200 chr3R 29471976 intron Ptp99A + chr3R 29472076 intron Ptp99A + chr3R 29472176 intron Ptp99A + chr3R_7_29470001 chr3R_29470001 RAL-774_125 2497 chr3R 29505849 29505915 chr3R 29505975 29506042 16 120 3.0 8.0 5.5 2.5 193 chr3R 29505849 intergenic not near genes chr3R 29505946 intergenic not near genes chr3R 29506042 intergenic not near genes chr3R_16_29505001 chr3R_29505001 RAL-774_125 2498 chr3R 29590343 29590395 chr3R 29590486 29590520 11 138 3.5 4.0 3.8 2.3 177 chr3R 29590343 exon CG31041 - chr3R 29590432 intron CG31041 - chr3R 29590520 exon CG31041 - chr3R_11_29590001 chr3R_29590001 RAL-774_125 2499 chr3R 29627556 29627703 chr3R 29627661 29627859 10 145 0.0 0.0 0.0 10.0 303 chr3R 29627556 intergenic not near genes chr3R 29627708 intergenic not near genes chr3R 29627859 intergenic not near genes chr3R_10_29625001 chr3R_29625001 RAL-774_125 2500 chr3R 29639145 29639188 chr3R 29639285 29639338 13 148 3.5 4.5 4.0 2.6 193 chr3R 29639145 intron Dop1R2 - chr3R 29639242 intron Dop1R2 - chr3R 29639338 intron Dop1R2 - chr3R_13_29635001 chr3R_29635001 RAL-774_125 2501 chr3R 29648967 29649010 chr3R 29649107 29649150 6 138 2.5 1.5 2.0 2.0 183 chr3R 29648967 intron Dop1R2 - chr3R 29649058 intron Dop1R2 - chr3R 29649150 intron Dop1R2 - chr3R_6_29645001 chr3R_29645001 RAL-774_125 2502 chr3R 29702103 29702157 chr3R 29702234 29702290 6 132 5.0 0.5 2.8 1.6 187 chr3R 29702103 intergenic not near genes chr3R 29702196 intergenic not near genes chr3R 29702290 intergenic not near genes chr3R_6_29700001 chr3R_29700001 RAL-774_125 2503 chr3R 29718129 29718164 chr3R 29718223 29718285 7 114 7.0 4.0 5.5 1.1 156 chr3R 29718129 intergenic not near genes chr3R 29718207 intergenic CG15506 + chr3R 29718285 intergenic CG15506 + chr3R_7_29715001 chr3R_29715001 RAL-774_125 2504 chr3R 29738219 29738292 chr3R 29739736 29739809 hobo 15 1517 3.5 9.0 6.2 2.1 1590 chr3R 29738219 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739809 5` UTR CG1969 + chr3R_15_29735001 chr3R_29735001 RAL-774_125 2505 chr3R 29754936 29754987 chr3R 29755049 29755114 6 124 0.0 3.0 1.5 2.4 178 chr3R 29754936 intergenic CR44953 -,yata + chr3R 29755025 intergenic CR44953 -,yata + chr3R 29755114 intergenic CR44953 - chr3R_6_29755001 chr3R_29755001 RAL-774_125 2506 chr3R 29758901 29758963 chr3R 29759019 29759091 13 121 7.0 3.0 5.0 2.2 190 chr3R 29758901 3` UTR CR44953 - chr3R 29758996 3` UTR CR44953 - chr3R 29759091 intergenic CR44953 - chr3R_13_29755001 chr3R_29755001 RAL-774_125 2507 chr3R 29760324 29760366 chr3R 29761570 29761612 pogo 8 1248 6.5 5.0 5.8 1.2 1288 chr3R 29760324 intergenic not near genes chr3R 29760968 intergenic not near genes chr3R 29761612 intergenic not near genes chr3R_8_29760001 chr3R_29760001 RAL-774_125 2508 chr3R 29831768 29831799 chr3R 29831903 29831928 8 132 9.0 5.5 7.2 1.0 160 chr3R 29831768 exon Atg16 - chr3R 29831848 intron Atg16 - chr3R 29831928 exon Atg16 - chr3R_8_29830001 chr3R_29830001 RAL-774_125 2509 chr3R 29831802 29831821 chr3R 29831900 29831950 9 125 7.5 5.0 6.2 1.2 148 chr3R 29831802 exon Atg16 - chr3R 29831876 intron Atg16 - chr3R 29831950 exon Atg16 - chr3R_9_29830001 chr3R_29830001 RAL-774_125 2510 chr3R 29854785 29854853 chr3R 29854915 29854983 10 129 6.5 6.0 6.2 1.4 198 chr3R 29854785 3` UTR dgt1 - chr3R 29854884 exon dgt1 - chr3R 29854983 exon dgt1 - chr3R_10_29850001 chr3R_29850001 RAL-774_125 2511 chr3R 29881982 29882046 chr3R 29891189 29891250 roo 15 9207 5.0 4.0 4.5 2.7 9268 chr3R 29881982 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891250 intron CG31038 + chr3R_15_29885001 chr3R_29885001 RAL-774_125 2512 chr3R 29905042 29905086 chr3R 29905172 29905216 9 129 4.5 2.5 3.5 2.0 174 chr3R 29905042 intergenic CG15515 + chr3R 29905129 intergenic CG15515 + chr3R 29905216 intergenic CG15515 + chr3R_9_29905001 chr3R_29905001 RAL-774_125 2513 chr3R 29950526 29950595 chr3R 29950652 29950721 17 119 1.5 4.5 3.0 4.2 195 chr3R 29950526 intergenic TkR99D - chr3R 29950624 intergenic TkR99D - chr3R 29950721 intergenic TkR99D - chr3R_17_29950001 chr3R_29950001 RAL-774_125 2514 chr3R 29963440 29963494 chr3R 29963584 29963646 6 148 2.5 1.0 1.8 2.1 206 chr3R 29963440 intron TkR99D - chr3R 29963543 intron TkR99D - chr3R 29963646 intron TkR99D - chr3R_6_29960001 chr3R_29960001 RAL-774_125 2515 chr3R 29966027 29966068 chr3R 29966142 29966195 8 122 3.5 6.0 4.8 1.4 168 chr3R 29966027 intron TkR99D - chr3R 29966111 intron TkR99D - chr3R 29966195 intron TkR99D - chr3R_8_29965001 chr3R_29965001 RAL-774_125 2516 chr3R 30001702 30001760 chr3R 30001814 30001881 14 106 5.5 5.0 5.2 2.3 179 chr3R 30001702 3` UTR Tace + chr3R 30001792 intron Tace + chr3R 30001881 intron Tace + chr3R_14_30000001 chr3R_30000001 RAL-774_125 2517 chr3R 30059347 30059418 chr3R 30059483 30059553 14 132 4.5 1.0 2.8 3.7 206 chr3R 30059347 intron sima + chr3R 30059450 intron sima + chr3R 30059553 intron sima + chr3R_14_30055001 chr3R_30055001 RAL-774_125 2518 chr3R 30081821 30081866 chr3R 30081943 30081967 6 107 2.0 4.5 3.2 1.4 146 chr3R 30081821 intron sima + chr3R 30081894 intron sima + chr3R 30081967 intron sima + chr3R_6_30080001 chr3R_30080001 RAL-774_125 2519 chr3R 30175651 30175718 chr3R 30175787 30175854 14 133 4.0 5.5 4.8 2.4 203 chr3R 30175651 intergenic CG1983 - chr3R 30175752 intergenic CG1983 - chr3R 30175854 3` UTR CG1983 - chr3R_14_30175001 chr3R_30175001 RAL-774_125 2520 chr3R 30210592 30210671 chr3R 30210755 30210791 5 139 0.0 4.5 2.2 1.6 199 chr3R 30210592 intergenic Anp +,CecA1 + chr3R 30210692 intergenic CecA1 +,Anp + chr3R 30210791 intergenic CecA1 +,Anp + chr3R_5_30210001 chr3R_30210001 RAL-774_125 2521 chr3R 30224605 30224672 chr3R 30224731 30224800 14 126 2.0 3.5 2.8 3.7 195 chr3R 30224605 intergenic not near genes chr3R 30224702 intergenic not near genes chr3R 30224800 intergenic not near genes chr3R_14_30220001 chr3R_30220001 RAL-774_125 2522 chr3R 30238721 30238783 chr3R 30239935 30239997 1360 10 1212 2.0 5.0 3.5 2.2 1276 chr3R 30238721 intergenic not near genes chr3R 30239359 intergenic not near genes chr3R 30239997 intergenic not near genes chr3R_10_30235001 chr3R_30235001 RAL-774_125 2523 chr3R 30260323 30260388 chr3R 30260449 30260514 15 125 3.0 4.0 3.5 3.3 191 chr3R 30260323 intergenic not near genes chr3R 30260418 intergenic not near genes chr3R 30260514 intergenic not near genes chr3R_15_30260001 chr3R_30260001 RAL-774_125 2524 chr3R 30268205 30268439 chr3R 30268328 30268564 19 120 4.5 4.5 4.5 3.5 359 chr3R 30268205 intergenic not near genes chr3R 30268384 intergenic not near genes chr3R 30268564 intergenic not near genes chr3R_19_30265001 chr3R_30265001 RAL-774_125 2525 chr3R 30269654 30269672 chr3R 30269780 30269799 4 126 0.5 0.0 0.2 3.3 145 chr3R 30269654 intergenic not near genes chr3R 30269726 intergenic not near genes chr3R 30269799 intergenic not near genes chr3R_4_30265001 chr3R_30265001 RAL-774_125 2526 chr3R 30287722 30287772 chr3R 30287855 30287896 5 129 6.5 3.0 4.8 0.9 174 chr3R 30287722 intron hdc + chr3R 30287809 intron hdc + chr3R 30287896 intron hdc + chr3R_5_30285001 chr3R_30285001 RAL-774_125 2527 chr3R 30307077 30307146 chr3R 30307198 30307277 7 119 2.0 6.5 4.2 1.3 200 chr3R 30307077 intron hdc + chr3R 30307177 intron hdc + chr3R 30307277 intron hdc + chr3R_7_30305001 chr3R_30305001 RAL-774_125 2528 chr3R 30315595 30315623 chr3R 30315718 30315733 12 125 6.0 7.0 6.5 1.6 138 chr3R 30315595 intron hdc + chr3R 30315664 intron hdc + chr3R 30315733 intron hdc + chr3R_12_30315001 chr3R_30315001 RAL-774_125 2529 chr3R 30317284 30317357 chr3R 30324915 30324991 roo 6 7637 1.5 2.5 2.0 2.0 7707 chr3R 30317284 intron hdc + chr3R 30321138 intron hdc + chr3R 30324991 intron hdc + chr3R_6_30320001 chr3R_30320001 RAL-774_125 2530 chr3R 30331989 30332049 chr3R 30332113 30332178 10 126 5.5 6.0 5.8 1.5 189 chr3R 30331989 intron hdc + chr3R 30332084 intron hdc + chr3R 30332178 intron hdc + chr3R_10_30330001 chr3R_30330001 RAL-774_125 2531 chr3R 30338359 30338390 chr3R 30338491 30338522 8 131 2.5 3.0 2.8 2.1 163 chr3R 30338359 intron hdc + chr3R 30338440 intron hdc + chr3R 30338522 intron hdc + chr3R_8_30335001 chr3R_30335001 RAL-774_125 2532 chr3R 30347006 30347010 chr3R 30347123 30347126 4 121 8.5 6.5 7.5 0.5 120 chr3R 30347006 intron hdc + chr3R 30347066 intron hdc + chr3R 30347126 intron hdc + chr3R_4_30345001 chr3R_30345001 RAL-774_125 2533 chr3R 30347026 30347032 chr3R 30347119 30347145 4 112 7.0 6.0 6.5 0.5 119 chr3R 30347026 intron hdc + chr3R 30347086 intron hdc + chr3R 30347145 intron hdc + chr3R_4_30345001 chr3R_30345001 RAL-774_125 2534 chr3R 30375512 30375565 chr3R 30383185 30383233 412 5 7672 1.0 2.5 1.8 1.8 7721 chr3R 30375512 intergenic not near genes chr3R 30379372 intergenic not near genes chr3R 30383233 intergenic not near genes chr3R_5_30375001 chr3R_30375001 RAL-774_125 2535 chr3R 30396175 30396236 chr3R 30404490 30404552 roo 14 8314 4.0 6.0 5.0 2.3 8377 chr3R 30396175 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404552 5` UTR CR45570 + chr3R_14_30400001 chr3R_30400001 RAL-774_125 2536 chr3R 30413013 30413092 chr3R 30413140 30413212 10 125 6.0 3.5 4.8 1.7 199 chr3R 30413013 intergenic not near genes chr3R 30413112 intergenic not near genes chr3R 30413212 intergenic not near genes chr3R_10_30410001 chr3R_30410001 RAL-774_125 2537 chr3R 30480427 30480501 chr3R 30482945 30483014 jockey 9 2515 2.5 0.5 1.5 3.6 2587 chr3R 30480427 intron PH4alphaEFB + chr3R 30481720 intron PH4alphaEFB + chr3R 30483014 intron PH4alphaEFB + chr3R_9_30480001 chr3R_30480001 RAL-774_125 2538 chr3R 30488073 30488089 chr3R 30488202 30488218 5 129 7.0 0.0 3.5 1.1 145 chr3R 30488073 intergenic Jon99Fii - chr3R 30488146 intergenic Jon99Fii - chr3R 30488218 intergenic Jon99Fii - chr3R_5_30485001 chr3R_30485001 RAL-774_125 2539 chr3R 30548976 30549038 chr3R 30549112 30549171 11 139 4.0 3.5 3.8 2.3 195 chr3R 30548976 intron tmod + chr3R 30549074 intron tmod + chr3R 30549171 intron tmod + chr3R_11_30545001 chr3R_30545001 RAL-774_125 2540 chr3R 30571664 30571726 chr3R 30571794 30571856 5 121 1.5 4.0 2.8 1.3 192 chr3R 30571664 intron tmod + chr3R 30571760 intron tmod + chr3R 30571856 exon tmod + chr3R_5_30570001 chr3R_30570001 RAL-774_125 2541 chr3R 30591252 30591336 chr3R 30591396 30591463 9 142 0.0 2.0 1.0 4.5 211 chr3R 30591252 intergenic not near genes chr3R 30591358 intergenic not near genes chr3R 30591463 intergenic not near genes chr3R_9_30590001 chr3R_30590001 RAL-774_125 2542 chr3R 30627570 30627630 chr3R 30627700 30627760 11 123 5.0 4.5 4.8 1.9 190 chr3R 30627570 3` UTR CG2267 - chr3R 30627665 exon CG2267 - chr3R 30627760 exon CG2267 - chr3R_11_30625001 chr3R_30625001 RAL-774_125 2543 chr3R 30679476 30679548 chr3R 30686995 30687067 blood 16 7515 3.5 1.0 2.2 5.0 7591 chr3R 30679476 intergenic not near genes chr3R 30683272 intergenic not near genes chr3R 30687067 intergenic not near genes chr3R_16_30680001 chr3R_30680001 RAL-774_125 2544 chr3R 30818777 30818829 chr3R 30820392 30820437 1360 10 1613 5.0 6.5 5.8 1.5 1660 chr3R 30818777 intron cindr + chr3R 30819607 intron cindr + chr3R 30820437 intron cindr + chr3R_10_30815001 chr3R_30815001 RAL-774_125 2545 chr3R 30831677 30831695 chr3R 30831803 30831821 4 123 5.5 9.5 7.5 0.5 144 chr3R 30831677 intron CG15544 + chr3R 30831749 intron CG15544 + chr3R 30831821 intron CG15544 + chr3R_4_30830001 chr3R_30830001 RAL-774_125 2546 chr3R 30862394 30862439 chr3R 30862533 30862597 9 151 7.0 5.5 6.2 1.2 203 chr3R 30862394 intergenic not near genes chr3R 30862496 intergenic not near genes chr3R 30862597 intergenic not near genes chr3R_9_30860001 chr3R_30860001 RAL-774_125 2547 chr3R 30933133 30933175 chr3R 30933249 30933292 4 114 5.5 3.5 4.5 0.7 159 chr3R 30933133 intergenic not near genes chr3R 30933212 intergenic not near genes chr3R 30933292 intergenic not near genes chr3R_4_30930001 chr3R_30930001 RAL-774_125 2548 chr3R 30934723 30934785 chr3R 30934844 30934907 16 131 6.0 8.5 7.2 2.0 184 chr3R 30934723 intergenic not near genes chr3R 30934815 intergenic not near genes chr3R 30934907 intergenic CG15549 - chr3R_16_30930001 chr3R_30930001 RAL-774_125 2549 chr3R 30946382 30946392 chr3R 30946515 30946517 4 132 7.5 4.5 6.0 0.6 135 chr3R 30946382 intergenic not near genes chr3R 30946450 intergenic not near genes chr3R 30946517 intergenic not near genes chr3R_4_30945001 chr3R_30945001 RAL-774_125 2550 chr3R 30946399 30946416 chr3R 30946513 30946533 5 121 6.5 4.5 5.5 0.8 134 chr3R 30946399 intergenic not near genes chr3R 30946466 intergenic not near genes chr3R 30946533 intergenic not near genes chr3R_5_30945001 chr3R_30945001 RAL-774_125 2551 chr3R 30973084 30973130 chr3R 30973295 30973330 6 208 1.5 2.0 1.8 2.1 246 chr3R 30973084 intron 5-HT7 - chr3R 30973207 intron 5-HT7 - chr3R 30973330 intron 5-HT7 - chr3R_6_30970001 chr3R_30970001 RAL-774_125 2552 chr3R 30973131 30973166 chr3R 30973294 30973369 5 197 1.0 2.0 1.5 2.0 238 chr3R 30973131 intron 5-HT7 - chr3R 30973250 intron 5-HT7 - chr3R 30973369 intron 5-HT7 - chr3R_5_30970001 chr3R_30970001 RAL-774_125 2553 chr3R 31042077 31042143 chr3R 31042214 31042280 15 137 2.5 2.0 2.2 4.7 203 chr3R 31042077 intron CanA1 + chr3R 31042178 intron CanA1 + chr3R 31042280 exon CanA1 + chr3R_15_31040001 chr3R_31040001 RAL-774_125 2554 chr3R 31074195 31074252 chr3R 31081843 31081900 springer 7 7647 5.0 7.5 6.2 1.0 7705 chr3R 31074195 intron Sox100B + chr3R 31078048 intron Sox100B + chr3R 31081900 exon Sox100B + chr3R_7_31075001 chr3R_31075001 RAL-774_125 2555 chr3R 31087634 31087694 chr3R 31087866 31087898 10 229 8.0 7.5 7.8 1.1 264 chr3R 31087634 intergenic not near genes chr3R 31087766 intergenic not near genes chr3R 31087898 intergenic not near genes chr3R_10_31085001 chr3R_31085001 RAL-774_125 2556 chr3R 31224119 31224175 chr3R 31224243 31224310 16 129 5.5 5.5 5.5 2.5 191 chr3R 31224119 intron CG12054 + chr3R 31224214 intron CG12054 + chr3R 31224310 intron CG12054 + chr3R_16_31220001 chr3R_31220001 RAL-774_125 2557 chr3R 31279335 31279403 chr3R 31285571 31285626 diver 12 6231 6.5 7.0 6.8 1.5 6291 chr3R 31279335 intergenic not near genes chr3R 31282480 intergenic not near genes chr3R 31285626 intergenic not near genes chr3R_12_31280001 chr3R_31280001 RAL-774_125 2558 chr3R 31320118 31320187 chr3R 31320256 31320327 13 142 2.0 7.0 4.5 2.4 209 chr3R 31320118 intron CG34347 + chr3R 31320222 intron CG34347 + chr3R 31320327 intron CG34347 + chr3R_13_31320001 chr3R_31320001 RAL-774_125 2559 chr3R 31330401 31330410 chr3R 31335636 31335670 copia 5 5250 7.0 1.5 4.2 1.0 5269 chr3R 31330401 intron CG34347 + chr3R 31333036 intron CG34347 + chr3R 31335670 intron CG34347 + chr3R_5_31330001 chr3R_31330001 RAL-774_125 2560 chr3R 31412662 31412721 chr3R 31412804 31412859 7 142 2.0 3.5 2.8 1.8 197 chr3R 31412662 intron Gprk2 + chr3R 31412760 intron Gprk2 + chr3R 31412859 intron Gprk2 + chr3R_7_31410001 chr3R_31410001 RAL-774_125 2561 chr3R 31426842 31426898 chr3R 31426984 31427034 12 139 4.5 5.0 4.8 2.1 192 chr3R 31426842 intron Gprk2 + chr3R 31426938 intron Gprk2 + chr3R 31427034 intron Gprk2 + chr3R_12_31425001 chr3R_31425001 RAL-774_125 2562 chr3R 31435318 31435356 chr3R 31435520 31435542 6 198 5.5 1.5 3.5 1.3 224 chr3R 31435318 intron Gprk2 + chr3R 31435430 intron Gprk2 + chr3R 31435542 intron Gprk2 + chr3R_6_31435001 chr3R_31435001 RAL-774_125 2563 chr3R 31435358 31435390 chr3R 31435519 31435581 17 197 2.0 1.0 1.5 6.8 223 chr3R 31435358 intron Gprk2 + chr3R 31435470 intron Gprk2 + chr3R 31435581 intron Gprk2 + chr3R_17_31435001 chr3R_31435001 RAL-774_125 2564 chr3R 31442226 31442294 chr3R 31442356 31442406 14 130 3.5 3.5 3.5 3.1 180 chr3R 31442226 intron Gprk2 + chr3R 31442316 intron Gprk2 + chr3R 31442406 intron Gprk2 + chr3R_14_31440001 chr3R_31440001 RAL-774_125 2565 chr3R 31446066 31446071 chr3R 31446201 31446211 6 138 7.5 7.5 7.5 0.7 145 chr3R 31446066 intron Gprk2 + chr3R 31446138 intron Gprk2 + chr3R 31446211 intron Gprk2 + chr3R_6_31445001 chr3R_31445001 RAL-774_125 2566 chr3R 31448588 31448629 chr3R 31448689 31448750 6 114 6.0 6.5 6.2 0.8 162 chr3R 31448588 intron Gprk2 + chr3R 31448669 intron Gprk2 + chr3R 31448750 intron Gprk2 + chr3R_6_31445001 chr3R_31445001 RAL-774_125 2567 chr3R 31539812 31539885 chr3R 31539947 31540015 13 129 4.0 1.0 2.5 3.7 203 chr3R 31539812 intergenic not near genes chr3R 31539914 intergenic not near genes chr3R 31540015 intergenic not near genes chr3R_13_31535001 chr3R_31535001 RAL-774_125 2568 chr3R 31548858 31548892 chr3R 31548993 31549019 7 126 5.0 9.0 7.0 0.9 161 chr3R 31548858 intron nyo + chr3R 31548938 intron nyo + chr3R 31549019 intron nyo + chr3R_7_31545001 chr3R_31545001 RAL-774_125 2569 chr3R 31691494 31691560 chr3R 31696305 31696361 Doc 11 4810 3.5 4.0 3.8 2.3 4867 chr3R 31691494 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696361 intergenic not near genes chr3R_11_31690001 chr3R_31690001 RAL-774_125 2570 chr3R 31699681 31699745 chr3R 31699813 31699853 8 113 4.0 4.0 4.0 1.6 172 chr3R 31699681 intergenic not near genes chr3R 31699767 intergenic not near genes chr3R 31699853 intergenic not near genes chr3R_8_31695001 chr3R_31695001 RAL-774_125 2571 chr3R 31829337 31829397 chr3R 31829457 31829516 8 113 4.5 6.0 5.2 1.3 179 chr3R 31829337 intron RhoGAP100F + chr3R 31829426 intron RhoGAP100F + chr3R 31829516 intron RhoGAP100F + chr3R_8_31825001 chr3R_31825001 RAL-774_125 2572 chr3R 31858744 31858780 chr3R 31858864 31858900 7 122 7.5 5.5 6.5 0.9 156 chr3R 31858744 intron heph - chr3R 31858822 intron heph - chr3R 31858900 intron heph - chr3R_7_31855001 chr3R_31855001 RAL-774_125 2573 chr3R 31874822 31874875 chr3R 31874938 31874991 5 117 6.5 4.5 5.5 0.8 169 chr3R 31874822 intron heph - chr3R 31874906 intron heph - chr3R 31874991 intron heph - chr3R_5_31870001 chr3R_31870001 RAL-774_125 2574 chr3R 31885635 31885684 chr3R 31885762 31885811 6 125 7.0 4.5 5.8 0.9 176 chr3R 31885635 intron heph - chr3R 31885723 intron heph - chr3R 31885811 intron heph - chr3R_6_31885001 chr3R_31885001 RAL-774_125 2575 chr3R 31930833 31930900 chr3R 31930983 31931048 7 147 2.0 2.5 2.2 2.2 215 chr3R 31930833 intron heph - chr3R 31930940 intron heph - chr3R 31931048 intron heph - chr3R_7_31930001 chr3R_31930001 RAL-774_125 2576 chr3R 31931145 31931215 chr3R 31931278 31931343 12 132 1.5 1.0 1.2 5.5 198 chr3R 31931145 intron heph - chr3R 31931244 intron heph - chr3R 31931343 intron heph - chr3R_12_31930001 chr3R_31930001 RAL-774_125 2577 chr3R 31997954 31998015 chr3R 32005464 32005519 blood 10 7516 1.5 1.5 1.5 4.0 7565 chr3R 31997954 intron heph - chr3R 32001736 intron heph - chr3R 32005519 intron heph - chr3R_10_32000001 chr3R_32000001 RAL-774_125 2578 chr4 76461 76503 chr4 81949 81996 I-element 5 5491 4.0 4.5 4.2 1.0 5535 chr4 76461 intron pan + chr4 79228 intron pan + chr4 81996 intron pan + chr4_5_75001 chr4_75001 RAL-774_125 2579 chr4 257366 257423 chr4 257581 257633 13 219 5.5 4.5 5.0 2.2 267 chr4 257366 exon RhoGAP102A + chr4 257500 intron RhoGAP102A + chr4 257633 intron RhoGAP102A + chr4_13_255001 chr4_255001 RAL-774_125 2580 chr4 319962 319990 chr4 328183 328215 Stalker2 4 8224 3.5 3.0 3.2 1.0 8253 chr4 319962 3` UTR CG32850 + chr4 324088 intron CG32850 + chr4 328215 3` UTR,3` UTR CG32850 +,PMCA - chr4_4_320001 chr4_320001 RAL-774_125 2581 chr4 671577 671627 chr4 680196 680209 Tirant 11 8624 1.5 7.0 4.2 2.1 8632 chr4 671577 intron CG11360 + chr4 675893 intron CG11360 + chr4 680209 intron CG11360 + chr4_11_675001 chr4_675001 RAL-774_125 2582 chr4 694868 694935 chr4 694999 695066 13 129 3.5 5.5 4.5 2.4 198 chr4 694868 intron myo - chr4 694967 intron myo - chr4 695066 intron myo - chr4_13_690001 chr4_690001 RAL-774_125 2583 chr4 769761 769774 chr4 769937 769950 INE-1 4 176 7.5 5.0 6.2 0.6 189 chr4 769761 intron bt + chr4 769856 intron bt + chr4 769950 intron bt + chr4_4_765001 chr4_765001 RAL-774_125 2584 chr4 959587 959648 chr4 959811 959877 12 227 2.0 6.5 4.2 2.3 290 chr4 959587 intergenic CR44030 +,CR45201 - chr4 959732 5` UTR CR44030 + chr4 959877 5` UTR CR44030 + chr4_12_955001 chr4_955001 RAL-774_125 2585 chrX 295816 295867 chrX 303486 303535 412 14 7668 4.0 6.5 5.2 2.3 7719 chrX 295816 intron CG3777 + chrX 299676 intron CG3777 + chrX 303535 intron CG3777 + chrX_14_295001 chrX_295001 RAL-774_125 2586 chrX 318427 318492 chrX 323563 323618 flea 14 5133 4.5 5.0 4.8 2.4 5191 chrX 318427 intron,intron CG3777 +,CG32816 - chrX 321022 intron,intron CG3777 +,CG32816 - chrX 323618 intron,intron CG3777 +,CG32816 - chrX_14_320001 chrX_320001 RAL-774_125 2587 chrX 325588 325647 chrX 325717 325782 11 129 3.5 4.0 3.8 2.3 194 chrX 325588 intron,intron CG3777 +,CG32816 - chrX 325685 intron,intron CG3777 +,CG32816 - chrX 325782 intron,intron CG3777 +,CG32816 - chrX_11_325001 chrX_325001 RAL-774_125 2588 chrX 428378 428437 chrX 434613 434662 3S18 12 6229 4.5 2.0 3.2 2.9 6284 chrX 428378 intron CG32816 - chrX 431520 intron CG32816 - chrX 434662 intron CG32816 - chrX_12_430001 chrX_430001 RAL-774_125 2589 chrX 440381 440438 chrX 440618 440620 8 224 5.0 2.0 3.5 1.8 239 chrX 440381 intron CG32816 - chrX 440500 intron CG32816 - chrX 440620 intron CG32816 - chrX_8_440001 chrX_440001 RAL-774_125 2590 chrX 440441 440448 chrX 440613 440630 9 195 5.0 1.0 3.0 2.2 189 chrX 440441 intron CG32816 - chrX 440536 intron CG32816 - chrX 440630 intron CG32816 - chrX_9_440001 chrX_440001 RAL-774_125 2591 chrX 440964 441019 chrX 441092 441135 8 125 3.5 4.5 4.0 1.6 171 chrX 440964 intron CG32816 - chrX 441050 intron CG32816 - chrX 441135 intron CG32816 - chrX_8_440001 chrX_440001 RAL-774_125 2592 chrX 450325 450392 chrX 450453 450520 6 127 5.5 4.0 4.8 1.0 195 chrX 450325 intron CG32816 - chrX 450422 intron CG32816 - chrX 450520 intron CG32816 - chrX_6_450001 chrX_450001 RAL-774_125 2593 chrX 494581 494620 chrX 494712 494757 10 140 6.0 5.5 5.8 1.5 176 chrX 494581 intergenic CG17778 + chrX 494669 5` UTR CG17778 + chrX 494757 intron CG17778 + chrX_10_490001 chrX_490001 RAL-774_125 2594 chrX 547614 547660 chrX 547877 547954 19 289 4.0 3.5 3.8 4.0 340 chrX 547614 intron Appl + chrX 547784 intron Appl + chrX 547954 intron Appl + chrX_19_545001 chrX_545001 RAL-774_125 2595 chrX 551383 551451 chrX 558995 559063 412 8 7599 5.0 7.5 6.2 1.1 7680 chrX 551383 intron Appl + chrX 555223 intron Appl + chrX 559063 intron Appl + chrX_8_555001 chrX_555001 RAL-774_125 2596 chrX 667618 667669 chrX 667749 667802 7 131 3.5 0.0 1.8 2.5 184 chrX 667618 intergenic not near genes chrX 667710 intergenic not near genes chrX 667802 intergenic not near genes chrX_7_665001 chrX_665001 RAL-774_125 2597 chrX 670208 670283 chrX 670350 670390 10 124 0.0 1.0 0.5 6.7 182 chrX 670208 intergenic not near genes chrX 670299 intergenic not near genes chrX 670390 intergenic not near genes chrX_10_670001 chrX_670001 RAL-774_125 2598 chrX 680787 680865 chrX 680920 680988 14 128 5.0 1.5 3.2 3.3 201 chrX 680787 intergenic not near genes chrX 680888 intergenic not near genes chrX 680988 intergenic not near genes chrX_14_680001 chrX_680001 RAL-774_125 2599 chrX 706743 706829 chrX 707164 707175 10 411 0.0 5.0 2.5 2.9 432 chrX 706743 intron sdk + chrX 706959 intron sdk + chrX 707175 intron sdk + chrX_10_705001 chrX_705001 RAL-774_125 2600 chrX 802244 802266 chrX 802371 802384 4 119 5.5 3.0 4.2 0.8 140 chrX 802244 exon CG13359 - chrX 802314 exon CG13359 - chrX 802384 exon CG13359 - chrX_4_800001 chrX_800001 RAL-774_125 2601 chrX 802285 802320 chrX 802364 802411 6 98 3.0 2.5 2.8 1.6 126 chrX 802285 exon CG13359 - chrX 802348 exon CG13359 - chrX 802411 exon CG13359 - chrX_6_800001 chrX_800001 RAL-774_125 2602 chrX 812232 812296 chrX 817904 817947 297 6 5674 4.5 5.5 5.0 1.0 5715 chrX 812232 intron CG43867 - chrX 815090 intron CG43867 - chrX 817947 intron CG43867 - chrX_6_815001 chrX_815001 RAL-774_125 2603 chrX 827578 827606 chrX 835414 835448 roo 9 7838 7.5 8.5 8.0 1.0 7870 chrX 827578 intron CG43867 - chrX 831513 intron CG43867 - chrX 835448 intron CG43867 - chrX_9_830001 chrX_830001 RAL-774_125 2604 chrX 906674 906697 chrX 908498 908536 S-element 9 1835 7.0 4.0 5.5 1.4 1862 chrX 906674 intron CG43867 - chrX 907605 intron CG43867 - chrX 908536 intron CG43867 - chrX_9_905001 chrX_905001 RAL-774_125 2605 chrX 1051035 1051079 chrX 1051163 1051207 11 125 5.5 7.5 6.5 1.5 172 chrX 1051035 intron CR44779 + chrX 1051121 intron CR44779 + chrX 1051207 intron CR44779 + chrX_11_1050001 chrX_1050001 RAL-774_125 2606 chrX 1163269 1163320 chrX 1163376 1163448 20 120 4.0 1.0 2.5 5.7 179 chrX 1163269 intergenic CG34320 - chrX 1163358 intergenic CG34320 - chrX 1163448 intergenic CG34320 - chrX_20_1160001 chrX_1160001 RAL-774_125 2607 chrX 1185518 1185591 chrX 1185646 1185694 9 123 5.5 4.0 4.8 1.6 176 chrX 1185518 intron CG14626 + chrX 1185606 intron CG14626 + chrX 1185694 intron CG14626 + chrX_9_1185001 chrX_1185001 RAL-774_125 2608 chrX 1357734 1357786 chrX 1367954 1368006 Doc 7 10219 4.5 8.0 6.2 1.0 10272 chrX 1357734 intergenic png - chrX 1362870 intergenic not near genes chrX 1368006 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-774_125 2609 chrX 1517996 1518048 chrX 1523448 1523463 jockey 7 5443 3.5 5.5 4.5 1.3 5467 chrX 1517996 intergenic inc + chrX 1520730 intergenic not near genes chrX 1523463 intergenic not near genes chrX_7_1520001 chrX_1520001 RAL-774_125 2610 chrX 1554478 1554537 chrX 1554673 1554711 11 185 12.5 23.0 17.8 0.6 233 chrX 1554478 exon Mur2B - chrX 1554594 intron Mur2B - chrX 1554711 exon Mur2B - chrX_11_1550001 chrX_1550001 RAL-774_125 2611 chrX 1555562 1555586 chrX 1555722 1555746 4 169 21.0 6.5 13.8 0.3 184 chrX 1555562 exon Mur2B - chrX 1555654 exon Mur2B - chrX 1555746 exon Mur2B - chrX_4_1555001 chrX_1555001 RAL-774_125 2612 chrX 1930502 1930556 chrX 1938117 1938177 opus 6 7619 3.0 3.0 3.0 1.5 7675 chrX 1930502 3` UTR CG11596 + chrX 1934340 intergenic not near genes chrX 1938177 3` UTR CG3857 - chrX_6_1930001 chrX_1930001 RAL-774_125 2613 chrX 1954850 1954892 chrX 1962829 1962847 Stalker2 6 7969 2.5 4.0 3.2 1.4 7997 chrX 1954850 intron Hr4 + chrX 1958848 intron Hr4 + chrX 1962847 intron Hr4 + chrX_6_1955001 chrX_1955001 RAL-774_125 2614 chrX 2023917 2023964 chrX 2024086 2024109 9 166 16.0 23.0 19.5 0.4 192 chrX 2023917 3` UTR,3` UTR east +,Actn - chrX 2024013 3` UTR,3` UTR east +,Actn - chrX 2024109 3` UTR,3` UTR east +,Actn - chrX_9_2020001 chrX_2020001 RAL-774_125 2615 chrX 2020893 2020938 chrX 2025589 2025610 5 4690 16.5 11.5 14.0 0.3 4717 chrX 2020893 exon east + chrX 2023252 3` UTR east + chrX 2025610 exon Actn - chrX_5_2020001 chrX_2020001 RAL-774_125 2616 chrX 2205406 2205480 chrX 2205688 2205762 21 279 2.0 5.5 3.8 4.4 356 chrX 2205406 intergenic Mct1 +,msta - chrX 2205584 intergenic Mct1 +,msta - chrX 2205762 intergenic msta -,Mct1 + chrX_21_2205001 chrX_2205001 RAL-774_125 2617 chrX 2429612 2429666 chrX 2429737 2429797 6 127 0.0 1.5 0.8 3.3 185 chrX 2429612 intergenic not near genes chrX 2429704 intergenic not near genes chrX 2429797 intergenic not near genes chrX_6_2425001 chrX_2425001 RAL-774_125 2618 chrX 2578779 2578827 chrX 2578915 2578969 7 140 3.5 3.5 3.5 1.6 190 chrX 2578779 intergenic Pdfr +,Vha36-3 - chrX 2578874 intergenic Vha36-3 -,Pdfr + chrX 2578969 intergenic Vha36-3 -,Pdfr + chrX_7_2575001 chrX_2575001 RAL-774_125 2619 chrX 2610344 2610353 chrX 2617511 2617512 HMS-Beagle 4 7165 8.5 5.0 6.8 0.5 7168 chrX 2610344 intergenic CG8636 - chrX 2613928 intergenic not near genes chrX 2617512 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-774_125 2620 chrX 2635331 2635399 chrX 2635490 2635558 21 156 0.5 6.0 3.2 5.0 227 chrX 2635331 intron sgg + chrX 2635444 intron sgg + chrX 2635558 intron sgg + chrX_21_2635001 chrX_2635001 RAL-774_125 2621 chrX 2656851 2656904 chrX 2657006 2657064 17 162 4.0 3.0 3.5 3.8 213 chrX 2656851 intron sgg + chrX 2656958 intron sgg + chrX 2657064 intron sgg + chrX_17_2655001 chrX_2655001 RAL-774_125 2622 chrX 2664338 2664399 chrX 2665535 2665594 1360 6 1196 3.0 3.0 3.0 1.5 1256 chrX 2664338 intron sgg + chrX 2664966 intron sgg + chrX 2665594 intron sgg + chrX_6_2660001 chrX_2660001 RAL-774_125 2623 chrX 2753352 2753392 chrX 2753590 2753638 4 251 5.5 6.0 5.8 0.6 286 chrX 2753352 intron kirre + chrX 2753495 intron kirre + chrX 2753638 intron kirre + chrX_4_2750001 chrX_2750001 RAL-774_125 2624 chrX 2823761 2823775 chrX 2832347 2832363 roo 5 8594 10.0 5.0 7.5 0.6 8602 chrX 2823761 intron kirre + chrX 2828062 intron kirre + chrX 2832363 intron kirre + chrX_5_2825001 chrX_2825001 RAL-774_125 2625 chrX 2834525 2834583 chrX 2834663 2834721 12 137 5.0 5.0 5.0 2.0 196 chrX 2834525 intron kirre + chrX 2834623 intron kirre + chrX 2834721 intron kirre + chrX_12_2830001 chrX_2830001 RAL-774_125 2626 chrX 2840298 2840345 chrX 2840423 2840478 10 130 5.5 5.5 5.5 1.5 180 chrX 2840298 intron kirre + chrX 2840388 intron kirre + chrX 2840478 intron kirre + chrX_10_2840001 chrX_2840001 RAL-774_125 2627 chrX 2844866 2844911 chrX 2852326 2852344 mdg1 6 7456 6.0 3.0 4.5 1.1 7478 chrX 2844866 intron kirre + chrX 2848605 intron kirre + chrX 2852344 intron kirre + chrX_6_2845001 chrX_2845001 RAL-774_125 2628 chrX 2903499 2903524 chrX 2903742 2903792 6 268 2.5 1.5 2.0 2.0 293 chrX 2903499 intron kirre + chrX 2903646 intron kirre + chrX 2903792 intron kirre + chrX_6_2900001 chrX_2900001 RAL-774_125 2629 chrX 3057982 3058041 chrX 3058273 3058322 pogo 9 287 4.0 2.0 3.0 2.2 340 chrX 3057982 intron kirre + chrX 3058152 intron kirre + chrX 3058322 intron kirre + chrX_9_3055001 chrX_3055001 RAL-774_125 2630 chrX 3075582 3075595 chrX 3080943 3080949 Transpac 6 5359 12.0 0.0 6.0 0.9 5367 chrX 3075582 intron kirre + chrX 3078266 intron kirre + chrX 3080949 intron kirre + chrX_6_3075001 chrX_3075001 RAL-774_125 2631 chrX 3082561 3082606 chrX 3082673 3082709 5 95 5.0 3.5 4.2 1.0 148 chrX 3082561 intron kirre + chrX 3082635 intron kirre + chrX 3082709 intron kirre + chrX_5_3080001 chrX_3080001 RAL-774_125 2632 chrX 3109412 3109476 chrX 3109539 3109583 9 124 1.5 2.0 1.8 3.2 171 chrX 3109412 intron kirre + chrX 3109498 intron kirre + chrX 3109583 intron kirre + chrX_9_3105001 chrX_3105001 RAL-774_125 2633 chrX 3243612 3243635 chrX 3243752 3243775 6 140 5.0 3.5 4.2 1.2 163 chrX 3243612 intron dnc + chrX 3243694 intron dnc + chrX 3243775 intron dnc + chrX_6_3240001 chrX_3240001 RAL-774_125 2634 chrX 3306059 3306355 chrX 3306195 3306487 8 136 2.5 6.5 4.5 1.5 428 chrX 3306059 intron dnc + chrX 3306273 intron dnc + chrX 3306487 intron dnc + chrX_8_3305001 chrX_3305001 RAL-774_125 2635 chrX 3351797 3351807 chrX 3351889 3351943 4 105 5.0 6.5 5.8 0.6 146 chrX 3351797 intergenic not near genes chrX 3351870 intergenic not near genes chrX 3351943 intergenic not near genes chrX_4_3350001 chrX_3350001 RAL-774_125 2636 chrX 3352725 3352743 chrX 3352864 3352882 4 138 6.5 3.0 4.8 0.7 157 chrX 3352725 intergenic not near genes chrX 3352804 intergenic not near genes chrX 3352882 intergenic not near genes chrX_4_3350001 chrX_3350001 RAL-774_125 2637 chrX 3398099 3398377 chrX 3398224 3398505 16 125 1.5 4.0 2.8 4.2 406 chrX 3398099 intron,intron CR44999 +,CG12535 - chrX 3398302 intron,intron CR44999 +,CG12535 - chrX 3398505 intron,intron CR44999 +,CG12535 - chrX_16_3395001 chrX_3395001 RAL-774_125 2638 chrX 3415005 3415045 chrX 3421202 3421252 3S18 10 6226 2.0 2.5 2.2 3.1 6247 chrX 3415005 intron,intron CR44999 +,CG12535 - chrX 3418128 intron,intron CR44999 +,CG12535 - chrX 3421252 intron,intron CR44999 +,CG12535 - chrX_10_3415001 chrX_3415001 RAL-774_125 2639 chrX 3459938 3459989 chrX 3460065 3460116 16 125 5.0 5.0 5.0 2.7 178 chrX 3459938 intron,5` UTR CR44999 +,CG16782 - chrX 3460027 intron,5` UTR CR44999 +,CG16782 - chrX 3460116 intron,5` UTR CR44999 +,CG16782 - chrX_16_3460001 chrX_3460001 RAL-774_125 2640 chrX 3567271 3567292 chrX 3567406 3567427 5 135 0.0 3.5 1.8 1.8 156 chrX 3567271 intron,intron CG32791 -,ppk8 + chrX 3567349 intron,intron CG32791 -,ppk8 + chrX 3567427 intron,intron CG32791 -,ppk8 + chrX_5_3565001 chrX_3565001 RAL-774_125 2641 chrX 3597082 3597126 chrX 3597220 3597264 5 137 1.5 4.5 3.0 1.2 182 chrX 3597082 intron AstA-R1 + chrX 3597173 intron AstA-R1 + chrX 3597264 intron AstA-R1 + chrX_5_3595001 chrX_3595001 RAL-774_125 2642 chrX 3597545 3597578 chrX 3619749 3619793 roo 6 22211 7.5 5.5 6.5 0.8 22248 chrX 3597545 intron AstA-R1 + chrX 3608669 intron AstA-R1 + chrX 3619793 intron AstA-R1 + chrX_6_3605001 chrX_3605001 RAL-774_125 2643 chrX 3630500 3630571 chrX 3630626 3630692 12 124 2.5 0.0 1.2 5.5 192 chrX 3630500 intron AstA-R1 + chrX 3630596 intron AstA-R1 + chrX 3630692 intron AstA-R1 + chrX_12_3630001 chrX_3630001 RAL-774_125 2644 chrX 3713059 3713123 chrX 3713216 3713270 12 157 6.5 4.0 5.2 1.9 211 chrX 3713059 intron Rala - chrX 3713164 intron Rala - chrX 3713270 intron Rala - chrX_12_3710001 chrX_3710001 RAL-774_125 2645 chrX 3866068 3866117 chrX 3866184 3866192 9 116 1.0 4.0 2.5 2.6 124 chrX 3866068 intron yin - chrX 3866130 intron yin - chrX 3866192 intron yin - chrX_9_3865001 chrX_3865001 RAL-774_125 2646 chrX 3880464 3880478 chrX 3880600 3880614 9 136 1.0 6.5 3.8 1.9 150 chrX 3880464 intergenic VhaAC39-1 + chrX 3880539 intergenic VhaAC39-1 + chrX 3880614 intergenic VhaAC39-1 + chrX_9_3880001 chrX_3880001 RAL-774_125 2647 chrX 3881230 3881290 chrX 3881419 3881469 12 183 4.0 2.5 3.2 2.9 239 chrX 3881230 intron VhaAC39-1 + chrX 3881350 intron VhaAC39-1 + chrX 3881469 exon VhaAC39-1 + chrX_12_3880001 chrX_3880001 RAL-774_125 2648 chrX 3929996 3930061 chrX 3930127 3930192 15 130 4.5 4.5 4.5 2.7 196 chrX 3929996 5` UTR CG42541 - chrX 3930094 5` UTR CG42541 - chrX 3930192 5` UTR CG42541 - chrX_15_3930001 chrX_3930001 RAL-774_125 2649 chrX 3986845 3986888 chrX 3994503 3994571 412 14 7675 2.0 2.5 2.2 4.4 7726 chrX 3986845 intergenic not near genes chrX 3990708 intergenic not near genes chrX 3994571 intergenic not near genes chrX_14_3990001 chrX_3990001 RAL-774_125 2650 chrX 4048454 4048520 chrX 4048580 4048631 13 124 2.5 2.5 2.5 3.7 177 chrX 4048454 3` UTR CR45482 - chrX 4048542 3` UTR CR45482 - chrX 4048631 3` UTR CR45482 - chrX_13_4045001 chrX_4045001 RAL-774_125 2651 chrX 4157858 4157916 chrX 4164956 4165018 297 9 7100 3.5 5.0 4.2 1.7 7160 chrX 4157858 intron Fas2 - chrX 4161438 intron Fas2 - chrX 4165018 intron Fas2 - chrX_9_4160001 chrX_4160001 RAL-774_125 2652 chrX 4216299 4216338 chrX 4216422 4216467 8 128 3.5 6.5 5.0 1.3 168 chrX 4216299 intergenic not near genes chrX 4216383 intergenic CG15571 - chrX 4216467 intergenic CG15571 - chrX_8_4215001 chrX_4215001 RAL-774_125 2653 chrX 4262723 4262782 chrX 4262856 4262931 17 143 0.0 2.5 1.2 7.7 208 chrX 4262723 intergenic not near genes chrX 4262827 intergenic not near genes chrX 4262931 intergenic not near genes chrX_17_4260001 chrX_4260001 RAL-774_125 2654 chrX 4276439 4276510 chrX 4276568 4276628 8 124 3.0 2.0 2.5 2.3 189 chrX 4276439 intergenic CG15577 -,CR45483 - chrX 4276534 3` UTR CG15577 - chrX 4276628 exon CG15577 - chrX_8_4275001 chrX_4275001 RAL-774_125 2655 chrX 4387607 4387654 chrX 4387754 4387777 8 149 4.0 6.5 5.2 1.3 170 chrX 4387607 intergenic CR32773 - chrX 4387692 3` UTR CR32773 - chrX 4387777 3` UTR CR32773 - chrX_8_4385001 chrX_4385001 RAL-774_125 2656 chrX 4411427 4411469 chrX 4411553 4411590 10 125 4.5 6.5 5.5 1.5 163 chrX 4411427 intron CR32773 - chrX 4411508 intron CR32773 - chrX 4411590 intron CR32773 - chrX_10_4410001 chrX_4410001 RAL-774_125 2657 chrX 4700371 4700399 chrX 4700764 4700790 jockey 4 392 5.0 6.0 5.5 0.6 419 chrX 4700371 3` UTR ctp + chrX 4700580 3` UTR ctp + chrX 4700790 3` UTR ctp + chrX_4_4700001 chrX_4700001 RAL-774_125 2658 chrX 4755357 4755428 chrX 4755484 4755555 9 126 3.5 1.5 2.5 2.6 198 chrX 4755357 intergenic not near genes chrX 4755456 intergenic not near genes chrX 4755555 intergenic not near genes chrX_9_4755001 chrX_4755001 RAL-774_125 2659 chrX 4763213 4763271 chrX 4763751 4763802 Stalker4 8 530 3.5 2.5 3.0 2.0 589 chrX 4763213 intergenic not near genes chrX 4763508 intergenic not near genes chrX 4763802 intergenic not near genes chrX_8_4760001 chrX_4760001 RAL-774_125 2660 chrX 4816481 4816514 chrX 4817321 4817340 8 837 2.5 1.0 1.8 2.9 859 chrX 4816481 intergenic not near genes chrX 4816910 intergenic not near genes chrX 4817340 intergenic not near genes chrX_8_4815001 chrX_4815001 RAL-774_125 2661 chrX 4827947 4827995 chrX 4835348 4835396 Stalker4 7 7407 5.5 5.0 5.2 1.1 7449 chrX 4827947 intergenic not near genes chrX 4831672 intergenic not near genes chrX 4835396 intergenic not near genes chrX_7_4830001 chrX_4830001 RAL-774_125 2662 chrX 4871169 4871227 chrX 4871319 4871377 9 148 2.0 1.0 1.5 3.6 208 chrX 4871169 intron CG42594 + chrX 4871273 intron CG42594 + chrX 4871377 intron CG42594 + chrX_9_4870001 chrX_4870001 RAL-774_125 2663 chrX 4990003 4990063 chrX 4997267 4997327 roo 8 7263 3.0 5.5 4.2 1.5 7324 chrX 4990003 intron CR44833 - chrX 4993665 intron CR44833 - chrX 4997327 intron CR44833 - chrX_8_4990001 chrX_4990001 RAL-774_125 2664 chrX 5092783 5092799 chrX 5092881 5092895 6 98 3.5 10.5 7.0 0.8 112 chrX 5092783 intron,intron CG15465 +,rg + chrX 5092839 intron,intron CG15465 +,rg + chrX 5092895 intron,intron CG15465 +,rg + chrX_6_5090001 chrX_5090001 RAL-774_125 2665 chrX 5122769 5122839 chrX 5123048 5123117 5 278 0.5 0.0 0.2 4.2 348 chrX 5122769 intron,intron CG15465 +,rg + chrX 5122943 intron,intron CG15465 +,rg + chrX 5123117 intron,intron CG15465 +,rg + chrX_5_5120001 chrX_5120001 RAL-774_125 2666 chrX 5220339 5220367 chrX 5220630 5220654 4 290 5.5 2.5 4.0 0.8 315 chrX 5220339 intron,intron CG15465 +,rg + chrX 5220496 intron,intron CG15465 +,rg + chrX 5220654 intron,intron CG15465 +,rg + chrX_4_5220001 chrX_5220001 RAL-774_125 2667 chrX 5338664 5338735 chrX 5339962 5340023 jockey 10 1290 1.5 1.5 1.5 4.0 1359 chrX 5338664 intergenic not near genes chrX 5339344 intergenic not near genes chrX 5340023 intergenic SK + chrX_10_5335001 chrX_5335001 RAL-774_125 2668 chrX 5473544 5473615 chrX 5473670 5473741 11 118 3.0 3.0 3.0 2.8 197 chrX 5473544 intron SPR + chrX 5473642 intron SPR + chrX 5473741 intron SPR + chrX_11_5470001 chrX_5470001 RAL-774_125 2669 chrX 5524798 5524829 chrX 5528711 5528742 412 4 3913 2.5 0.5 1.5 1.6 3944 chrX 5524798 intergenic snoRNA:Psi28S-3342 - chrX 5526770 intergenic not near genes chrX 5528742 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-774_125 2670 chrX 5684433 5684450 chrX 5684578 5684595 5 144 0.5 5.0 2.8 1.3 162 chrX 5684433 3` UTR CG42449 + chrX 5684514 intergenic CG42449 + chrX 5684595 intergenic CG42449 + chrX_5_5680001 chrX_5680001 RAL-774_125 2671 chrX 5724984 5725059 chrX 5725137 5725212 11 151 5.0 7.0 6.0 1.6 228 chrX 5724984 intron CG32758 - chrX 5725098 intron CG32758 - chrX 5725212 intron CG32758 - chrX_11_5725001 chrX_5725001 RAL-774_125 2672 chrX 5727380 5727406 chrX 5732169 5732195 Doc 10 4788 6.5 6.5 6.5 1.3 4815 chrX 5727380 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732195 intron CG32758 - chrX_10_5725001 chrX_5725001 RAL-774_125 2673 chrX 5786546 5786605 chrX 5786657 5786738 10 123 2.0 1.0 1.5 4.0 192 chrX 5786546 intron CG42699 + chrX 5786642 intron CG42699 + chrX 5786738 intron CG42699 + chrX_10_5785001 chrX_5785001 RAL-774_125 2674 chrX 5883764 5883831 chrX 5884055 5884122 pogo 15 290 2.0 3.5 2.8 3.9 358 chrX 5883764 intron CR45668 - chrX 5883943 intron CR45668 - chrX 5884122 intron CR45668 - chrX_15_5880001 chrX_5880001 RAL-774_125 2675 chrX 5884130 5884185 chrX 5884416 5884476 pogo 16 288 3.5 3.0 3.2 3.8 346 chrX 5884130 intron CR45668 - chrX 5884303 intron CR45668 - chrX 5884476 intron CR45668 - chrX_16_5880001 chrX_5880001 RAL-774_125 2676 chrX 5953738 5953772 chrX 5953908 5953947 4 166 4.5 4.0 4.2 0.8 209 chrX 5953738 exon CG6048 + chrX 5953842 exon CG6048 + chrX 5953947 exon CG6048 + chrX_4_5950001 chrX_5950001 RAL-774_125 2677 chrX 6021186 6021259 chrX 6021323 6021386 9 127 0.5 4.0 2.2 2.8 200 chrX 6021186 intergenic not near genes chrX 6021286 intergenic not near genes chrX 6021386 intergenic not near genes chrX_9_6020001 chrX_6020001 RAL-774_125 2678 chrX 6071408 6071437 chrX 6071541 6071575 8 132 3.0 6.0 4.5 1.5 167 chrX 6071408 intron Tsp5D - chrX 6071492 intron Tsp5D - chrX 6071575 intron Tsp5D - chrX_8_6070001 chrX_6070001 RAL-774_125 2679 chrX 6171544 6171605 chrX 6179027 6179088 Quasimodo 6 7474 2.5 4.5 3.5 1.3 7544 chrX 6171544 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179088 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-774_125 2680 chrX 6198764 6198797 chrX 6198903 6198936 4 139 5.0 5.5 5.2 0.6 172 chrX 6198764 intergenic CG32751 -,CG43090 - chrX 6198850 intergenic CG32751 -,CG43090 - chrX 6198936 intergenic CG43090 -,CG32751 - chrX_4_6195001 chrX_6195001 RAL-774_125 2681 chrX 6215340 6215368 chrX 6215463 6215486 8 125 1.0 3.5 2.2 2.5 146 chrX 6215340 intergenic not near genes chrX 6215413 intergenic not near genes chrX 6215486 intergenic not near genes chrX_8_6215001 chrX_6215001 RAL-774_125 2682 chrX 6263796 6263846 chrX 6263927 6263942 9 123 4.0 2.0 3.0 2.2 146 chrX 6263796 intron schlank - chrX 6263869 intron schlank - chrX 6263942 intron schlank - chrX_9_6260001 chrX_6260001 RAL-774_125 2683 chrX 6306508 6306547 chrX 6306630 6306668 5 123 5.5 0.0 2.8 1.3 160 chrX 6306508 3` UTR CG3823 + chrX 6306588 3` UTR CG3823 + chrX 6306668 3` UTR CG3823 + chrX_5_6305001 chrX_6305001 RAL-774_125 2684 chrX 6335222 6335234 chrX 6337782 6337794 Tirant 4 2560 0.5 5.5 3.0 1.0 2572 chrX 6335222 intergenic not near genes chrX 6336508 intergenic not near genes chrX 6337794 5` UTR CG3842 + chrX_4_6335001 chrX_6335001 RAL-774_125 2685 chrX 6375190 6375260 chrX 6375446 6375518 10 253 3.0 2.5 2.8 2.6 328 chrX 6375190 intergenic not near genes chrX 6375354 intergenic not near genes chrX 6375518 intergenic not near genes chrX_10_6375001 chrX_6375001 RAL-774_125 2686 chrX 6392843 6392894 chrX 6397643 6397708 Doc 12 4808 3.0 8.0 5.5 1.8 4865 chrX 6392843 intergenic not near genes chrX 6395276 intergenic not near genes chrX 6397708 intergenic not near genes chrX_12_6395001 chrX_6395001 RAL-774_125 2687 chrX 6429959 6429992 chrX 6435480 6435502 Rt1c 10 5518 7.0 6.5 6.8 1.3 5543 chrX 6429959 intron CG42340 - chrX 6432730 intron CG42340 - chrX 6435502 intron CG42340 - chrX_10_6430001 chrX_6430001 RAL-774_125 2688 chrX 6445264 6445325 chrX 6451072 6451128 297 4 5806 2.5 3.0 2.8 1.1 5864 chrX 6445264 intron CG42340 - chrX 6448196 intron CG42340 - chrX 6451128 intron CG42340 - chrX_4_6445001 chrX_6445001 RAL-774_125 2689 chrX 6469832 6469896 chrX 6470196 6470239 11 356 3.0 3.5 3.2 2.6 407 chrX 6469832 intron CG42340 - chrX 6470036 intron CG42340 - chrX 6470239 intron CG42340 - chrX_11_6470001 chrX_6470001 RAL-774_125 2690 chrX 6562784 6562832 chrX 6571307 6571364 Tirant 18 8522 3.5 5.5 4.5 3.3 8580 chrX 6562784 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571364 intron CG34417 + chrX_18_6565001 chrX_6565001 RAL-774_125 2691 chrX 6591843 6591854 chrX 6591942 6591989 4 125 2.0 0.0 1.0 2.0 146 chrX 6591843 intron Pat1 + chrX 6591916 intron Pat1 + chrX 6591989 intron Pat1 + chrX_4_6590001 chrX_6590001 RAL-774_125 2692 chrX 6605447 6605489 chrX 6608518 6608561 Burdock 4 3070 2.5 9.0 5.8 0.6 3114 chrX 6605447 intron pigs + chrX 6607004 intron pigs + chrX 6608561 intron pigs + chrX_4_6605001 chrX_6605001 RAL-774_125 2693 chrX 6733632 6733670 chrX 6733773 6733824 6 145 5.0 5.5 5.2 1.0 192 chrX 6733632 intron,intron CG3168 -,CR43461 + chrX 6733728 intron,intron CG3168 -,CR43461 + chrX 6733824 intron,intron CG3168 -,CR43461 + chrX_6_6730001 chrX_6730001 RAL-774_125 2694 chrX 6752927 6752963 chrX 6753039 6753101 4 125 4.5 0.0 2.2 1.2 174 chrX 6752927 intron CG14439 + chrX 6753014 intron CG14439 + chrX 6753101 intron CG14439 + chrX_4_6750001 chrX_6750001 RAL-774_125 2695 chrX 6792055 6792088 chrX 6792190 6792224 5 131 2.0 7.5 4.8 0.9 169 chrX 6792055 intron C3G - chrX 6792140 intron C3G - chrX 6792224 intron C3G - chrX_5_6790001 chrX_6790001 RAL-774_125 2696 chrX 6865767 6865780 chrX 6865901 6865914 4 134 3.5 2.0 2.8 1.1 147 chrX 6865767 intron CG14434 - chrX 6865840 intron CG14434 - chrX 6865914 intron CG14434 - chrX_4_6865001 chrX_6865001 RAL-774_125 2697 chrX 6895840 6895860 chrX 6896193 6896213 5 353 4.0 3.0 3.5 1.1 373 chrX 6895840 intergenic not near genes chrX 6896026 intergenic not near genes chrX 6896213 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-774_125 2698 chrX 6897583 6897707 chrX 6897711 6897858 14 153 0.0 0.0 0.0 14.0 275 chrX 6897583 intergenic not near genes chrX 6897720 intergenic not near genes chrX 6897858 intergenic not near genes chrX_14_6895001 chrX_6895001 RAL-774_125 2699 chrX 6901339 6901376 chrX 6901465 6901494 9 120 6.5 7.0 6.8 1.2 155 chrX 6901339 intergenic not near genes chrX 6901416 intergenic not near genes chrX 6901494 intergenic not near genes chrX_9_6900001 chrX_6900001 RAL-774_125 2700 chrX 6989487 6989527 chrX 6989624 6989664 5 137 2.5 9.5 6.0 0.7 177 chrX 6989487 intron ogre - chrX 6989576 intron ogre - chrX 6989664 intron ogre - chrX_5_6985001 chrX_6985001 RAL-774_125 2701 chrX 7023564 7023600 chrX 7031004 7031038 Tabor 10 7435 3.5 3.0 3.2 2.4 7474 chrX 7023564 intron CG12541 - chrX 7027301 intron CG12541 - chrX 7031038 intron CG12541 - chrX_10_7025001 chrX_7025001 RAL-774_125 2702 chrX 7125224 7125251 chrX 7134433 7134460 roo 7 9209 0.0 8.5 4.2 1.3 9236 chrX 7125224 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134460 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-774_125 2703 chrX 7570604 7570663 chrX 7570771 7570841 6 176 0.0 3.0 1.5 2.4 237 chrX 7570604 intergenic not near genes chrX 7570722 intergenic not near genes chrX 7570841 intergenic not near genes chrX_6_7570001 chrX_7570001 RAL-774_125 2704 chrX 7702451 7702521 chrX 7702602 7702650 9 139 0.0 4.5 2.2 2.8 199 chrX 7702451 intron CHES-1-like - chrX 7702550 intron CHES-1-like - chrX 7702650 intron CHES-1-like - chrX_9_7700001 chrX_7700001 RAL-774_125 2705 chrX 7702863 7702917 chrX 7703349 7703406 jockey 20 486 6.5 4.5 5.5 3.1 543 chrX 7702863 intron CHES-1-like - chrX 7703134 intron CHES-1-like - chrX 7703406 intron CHES-1-like - chrX_20_7700001 chrX_7700001 RAL-774_125 2706 chrX 7737109 7737185 chrX 7737241 7737327 5 129 3.5 0.0 1.8 1.8 218 chrX 7737109 5` UTR Tom40 + chrX 7737218 intron Tom40 + chrX 7737327 5` UTR Tom40 + chrX_5_7735001 chrX_7735001 RAL-774_125 2707 chrX 7832419 7832461 chrX 7832532 7832600 7 130 0.0 1.0 0.5 4.7 181 chrX 7832419 intron CG1402 + chrX 7832510 intron CG1402 + chrX 7832600 intron CG1402 + chrX_7_7830001 chrX_7830001 RAL-774_125 2708 chrX 7845692 7845747 chrX 7847221 7847288 hopper2 12 1533 4.5 1.5 3.0 3.0 1596 chrX 7845692 intergenic not near genes chrX 7846490 intergenic not near genes chrX 7847288 intergenic not near genes chrX_12_7845001 chrX_7845001 RAL-774_125 2709 chrX 7881808 7881873 chrX 7881942 7882005 4 131 1.0 5.5 3.2 1.0 197 chrX 7881808 intergenic Ir7e -,Ir7f - chrX 7881906 intergenic Ir7f -,Ir7e - chrX 7882005 3` UTR Ir7f - chrX_4_7880001 chrX_7880001 RAL-774_125 2710 chrX 7999419 7999468 chrX 7999539 7999583 6 119 4.0 2.5 3.2 1.4 164 chrX 7999419 exon Tbh + chrX 7999501 exon Tbh + chrX 7999583 exon Tbh + chrX_6_7995001 chrX_7995001 RAL-774_125 2711 chrX 8031402 8031448 chrX 8035761 8035797 Juan 8 4353 2.0 4.0 3.0 2.0 4395 chrX 8031402 intergenic not near genes chrX 8033600 intergenic not near genes chrX 8035797 3` UTR CG2233 - chrX_8_8030001 chrX_8030001 RAL-774_125 2712 chrX 8085536 8085600 chrX 8085672 8085736 11 136 1.5 4.5 3.0 2.8 200 chrX 8085536 intron,5` UTR CG2256 -,CR45535 + chrX 8085636 intron,5` UTR CG2256 -,CR45535 + chrX 8085736 intron,5` UTR CG2256 -,CR45535 + chrX_11_8085001 chrX_8085001 RAL-774_125 2713 chrX 8263767 8263788 chrX 8263895 8263924 5 128 0.0 9.0 4.5 0.9 157 chrX 8263767 intron CG1632 + chrX 8263846 intron CG1632 + chrX 8263924 intron CG1632 + chrX_5_8260001 chrX_8260001 RAL-774_125 2714 chrX 8305150 8305223 chrX 8305277 8305322 7 119 5.5 2.0 3.8 1.5 172 chrX 8305150 intron nAChRalpha3 - chrX 8305236 intron nAChRalpha3 - chrX 8305322 intron nAChRalpha3 - chrX_7_8305001 chrX_8305001 RAL-774_125 2715 chrX 8364808 8364866 chrX 8365255 8365310 BS 11 444 2.5 4.0 3.2 2.6 502 chrX 8364808 intron nAChRalpha3 - chrX 8365059 intron nAChRalpha3 - chrX 8365310 intron nAChRalpha3 - chrX_11_8365001 chrX_8365001 RAL-774_125 2716 chrX 8505991 8506033 chrX 8506119 8506161 6 126 6.0 5.5 5.8 0.9 170 chrX 8505991 intron CG33181 + chrX 8506076 intron CG33181 + chrX 8506161 intron CG33181 + chrX_6_8505001 chrX_8505001 RAL-774_125 2717 chrX 8506488 8506559 chrX 8506746 8506816 12 256 1.5 1.0 1.2 5.5 328 chrX 8506488 intron CG33181 + chrX 8506652 intron CG33181 + chrX 8506816 intron CG33181 + chrX_12_8505001 chrX_8505001 RAL-774_125 2718 chrX 8509073 8509148 chrX 8509200 8509275 12 127 0.5 1.5 1.0 6.0 202 chrX 8509073 intron CG33181 + chrX 8509174 intron CG33181 + chrX 8509275 intron CG33181 + chrX_12_8505001 chrX_8505001 RAL-774_125 2719 chrX 8544108 8544157 chrX 8544237 8544286 4 127 1.0 1.0 1.0 2.0 178 chrX 8544108 intron Nrg + chrX 8544197 intron Nrg + chrX 8544286 intron Nrg + chrX_4_8540001 chrX_8540001 RAL-774_125 2720 chrX 8747971 8748009 chrX 8748098 8748133 8 120 12.0 3.0 7.5 0.9 162 chrX 8747971 intergenic not near genes chrX 8748052 intergenic not near genes chrX 8748133 intergenic not near genes chrX_8_8745001 chrX_8745001 RAL-774_125 2721 chrX 8772205 8772250 chrX 8772334 8772344 8 122 3.5 6.0 4.8 1.4 139 chrX 8772205 intron Lim1 - chrX 8772274 intron Lim1 - chrX 8772344 intron Lim1 - chrX_8_8770001 chrX_8770001 RAL-774_125 2722 chrX 8843470 8843516 chrX 8844012 8844058 6 538 3.0 2.0 2.5 1.7 588 chrX 8843470 intron CG12075 + chrX 8843764 intron CG12075 + chrX 8844058 intron CG12075 + chrX_6_8840001 chrX_8840001 RAL-774_125 2723 chrX 8856558 8856571 chrX 8856680 8856720 7 135 9.0 3.0 6.0 1.0 162 chrX 8856558 intron CG12075 + chrX 8856639 intron CG12075 + chrX 8856720 intron CG12075 + chrX_7_8855001 chrX_8855001 RAL-774_125 2724 chrX 8888599 8888654 chrX 8888725 8888781 9 127 3.0 3.0 3.0 2.2 182 chrX 8888599 intron Moe - chrX 8888690 intron Moe - chrX 8888781 intron Moe - chrX_9_8885001 chrX_8885001 RAL-774_125 2725 chrX 8894054 8894129 chrX 8894205 8894273 9 148 6.0 6.0 6.0 1.3 219 chrX 8894054 intron Moe - chrX 8894164 intron Moe - chrX 8894273 intron Moe - chrX_9_8890001 chrX_8890001 RAL-774_125 2726 chrX 8922286 8922354 chrX 8922768 8922817 jockey 5 475 5.5 2.5 4.0 1.0 531 chrX 8922286 intron rdgA + chrX 8922552 intron rdgA + chrX 8922817 intron rdgA + chrX_5_8920001 chrX_8920001 RAL-774_125 2727 chrX 8948722 8948779 chrX 8956282 8956339 roo 14 7558 0.0 4.0 2.0 4.7 7617 chrX 8948722 intron rdgA + chrX 8952530 intron rdgA + chrX 8956339 intron rdgA + chrX_14_8950001 chrX_8950001 RAL-774_125 2728 chrX 9062688 9062743 chrX 9062816 9062856 6 125 1.5 0.0 0.8 3.3 168 chrX 9062688 intron CG15365 - chrX 9062772 intron CG15365 - chrX 9062856 intron CG15365 - chrX_6_9060001 chrX_9060001 RAL-774_125 2729 chrX 9202654 9202691 chrX 9202780 9202811 6 123 4.5 2.0 3.2 1.4 157 chrX 9202654 intergenic not near genes chrX 9202732 intergenic not near genes chrX 9202811 intergenic not near genes chrX_6_9200001 chrX_9200001 RAL-774_125 2730 chrX 9218038 9218085 chrX 9218179 9218226 5 140 1.5 0.0 0.8 2.8 188 chrX 9218038 3` UTR t - chrX 9218132 3` UTR t - chrX 9218226 3` UTR t - chrX_5_9215001 chrX_9215001 RAL-774_125 2731 chrX 9337901 9337968 chrX 9338036 9338108 9 139 4.0 3.5 3.8 1.9 207 chrX 9337901 intron CG34449 - chrX 9338004 intron CG34449 - chrX 9338108 exon CG34449 - chrX_9_9335001 chrX_9335001 RAL-774_125 2732 chrX 9503211 9503211 chrX 22383082 22383377 8 12880127 12.5 120.0 66.2 0.1 12880166 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383377 intergenic not near genes chrX_8_15940001 chrX_15940001 RAL-774_125 2733 chrX 9508102 9508154 chrX 9509670 9509717 jockey 12 1564 5.0 3.5 4.2 2.3 1615 chrX 9508102 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509717 intron CG32700 - chrX_12_9505001 chrX_9505001 RAL-774_125 2734 chrX 9531610 9531667 chrX 9531740 9531777 10 124 6.5 0.5 3.5 2.2 167 chrX 9531610 intron CG32700 - chrX 9531694 intron CG32700 - chrX 9531777 intron CG32700 - chrX_10_9530001 chrX_9530001 RAL-774_125 2735 chrX 9537060 9537129 chrX 9537367 9537436 6 306 4.0 3.0 3.5 1.3 376 chrX 9537060 intron CG32700 - chrX 9537248 intron CG32700 - chrX 9537436 intron CG32700 - chrX_6_9535001 chrX_9535001 RAL-774_125 2736 chrX 9575763 9575782 chrX 9576137 9576156 mdg3 4 374 7.5 7.0 7.2 0.5 393 chrX 9575763 intron,exon CG32699 -,CG42395 - chrX 9575960 intron,intron CG32699 -,CG42395 - chrX 9576156 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-774_125 2737 chrX 9575787 9575810 chrX 9576136 9576184 mdg3 10 370 5.5 7.0 6.2 1.4 397 chrX 9575787 intron,exon CG32699 -,CG42395 - chrX 9575986 intron,intron CG32699 -,CG42395 - chrX 9576184 intron,5` UTR CG32699 -,CG42395 - chrX_10_9575001 chrX_9575001 RAL-774_125 2738 chrX 9716515 9716565 chrX 9716654 9716738 5 145 1.5 0.0 0.8 2.8 223 chrX 9716515 intergenic not near genes chrX 9716626 intergenic not near genes chrX 9716738 intergenic not near genes chrX_5_9715001 chrX_9715001 RAL-774_125 2739 chrX 9758005 9758052 chrX 9758139 9758187 6 132 3.0 1.0 2.0 2.0 182 chrX 9758005 intergenic not near genes chrX 9758096 intergenic not near genes chrX 9758187 intergenic not near genes chrX_6_9755001 chrX_9755001 RAL-774_125 2740 chrX 9791814 9791888 chrX 9791963 9792035 13 140 2.5 3.0 2.8 3.4 221 chrX 9791814 intron CG32698 + chrX 9791924 intron CG32698 + chrX 9792035 intron CG32698 + chrX_13_9790001 chrX_9790001 RAL-774_125 2741 chrX 9794746 9794786 chrX 9794863 9794908 6 124 4.5 4.0 4.2 1.2 162 chrX 9794746 intron CG32698 + chrX 9794827 intron CG32698 + chrX 9794908 intron CG32698 + chrX_6_9790001 chrX_9790001 RAL-774_125 2742 chrX 9839313 9839329 chrX 9839446 9839456 6 130 2.5 4.0 3.2 1.4 143 chrX 9839313 intron CG32698 + chrX 9839384 intron CG32698 + chrX 9839456 intron CG32698 + chrX_6_9835001 chrX_9835001 RAL-774_125 2743 chrX 9861149 9861213 chrX 9861271 9861343 11 114 4.5 4.0 4.2 2.1 194 chrX 9861149 intergenic not near genes chrX 9861246 intergenic not near genes chrX 9861343 intergenic not near genes chrX_11_9860001 chrX_9860001 RAL-774_125 2744 chrX 9961045 9961100 chrX 9961180 9961235 12 134 5.0 6.0 5.5 1.8 190 chrX 9961045 intergenic not near genes chrX 9961140 intergenic not near genes chrX 9961235 intergenic not near genes chrX_12_9960001 chrX_9960001 RAL-774_125 2745 chrX 10111610 10111643 chrX 10111738 10111781 4 136 4.5 0.0 2.2 1.2 171 chrX 10111610 intron RhoU + chrX 10111696 intron RhoU + chrX 10111781 intron RhoU + chrX_4_10110001 chrX_10110001 RAL-774_125 2746 chrX 10138199 10138238 chrX 10145748 10145792 412 9 7551 7.0 6.5 6.8 1.2 7593 chrX 10138199 intron,intron RhoU +,CR44894 - chrX 10141996 intron,intron RhoU +,CR44894 - chrX 10145792 intron,intron RhoU +,CR44894 - chrX_9_10140001 chrX_10140001 RAL-774_125 2747 chrX 10152606 10152662 chrX 10152729 10152791 6 125 0.5 1.0 0.8 3.3 185 chrX 10152606 intron CR44894 - chrX 10152698 intron CR44894 - chrX 10152791 intron CR44894 - chrX_6_10150001 chrX_10150001 RAL-774_125 2748 chrX 10154239 10154307 chrX 10154360 10154423 14 120 5.5 2.0 3.8 2.9 184 chrX 10154239 intron,intron CR44894 -,CG12645 + chrX 10154331 intron,intron CR44894 -,CG12645 + chrX 10154423 intron,exon CR44894 -,CG12645 + chrX_14_10150001 chrX_10150001 RAL-774_125 2749 chrX 10216832 10216849 chrX 10216943 10216980 4 126 9.0 3.0 6.0 0.6 148 chrX 10216832 3` UTR l(1)G0230 + chrX 10216906 3` UTR l(1)G0230 + chrX 10216980 3` UTR l(1)G0230 + chrX_4_10215001 chrX_10215001 RAL-774_125 2750 chrX 10285845 10285888 chrX 10286225 10286274 7 384 4.0 2.0 3.0 1.8 429 chrX 10285845 intron alpha-Man-I - chrX 10286060 intron alpha-Man-I - chrX 10286274 intron alpha-Man-I - chrX_7_10285001 chrX_10285001 RAL-774_125 2751 chrX 10317531 10317577 chrX 10317641 10317705 9 125 0.0 3.0 1.5 3.6 174 chrX 10317531 intron alpha-Man-I - chrX 10317618 intron alpha-Man-I - chrX 10317705 intron alpha-Man-I - chrX_9_10315001 chrX_10315001 RAL-774_125 2752 chrX 10322571 10322624 chrX 10322709 10322767 16 140 7.5 4.5 6.0 2.3 196 chrX 10322571 intron alpha-Man-I - chrX 10322669 intron alpha-Man-I - chrX 10322767 intron alpha-Man-I - chrX_16_10320001 chrX_10320001 RAL-774_125 2753 chrX 10440661 10440712 chrX 10440790 10440817 13 122 6.0 8.0 7.0 1.6 156 chrX 10440661 intron CG32683 - chrX 10440739 intron CG32683 - chrX 10440817 intron CG32683 - chrX_13_10440001 chrX_10440001 RAL-774_125 2754 chrX 10487315 10487353 chrX 10487428 10487483 6 130 5.0 4.0 4.5 1.1 168 chrX 10487315 intergenic CG32687 - chrX 10487399 intergenic CG32687 - chrX 10487483 intergenic CG32687 - chrX_6_10485001 chrX_10485001 RAL-774_125 2755 chrX 10550817 10550871 chrX 10552334 10552383 hobo 5 1512 3.5 5.0 4.2 1.0 1566 chrX 10550817 intron spri - chrX 10551600 intron spri - chrX 10552383 intron spri - chrX_5_10550001 chrX_10550001 RAL-774_125 2756 chrX 10584488 10584518 chrX 10584682 10584707 7 194 2.5 6.0 4.2 1.3 219 chrX 10584488 intron spri - chrX 10584598 intron spri - chrX 10584707 intron spri - chrX_7_10580001 chrX_10580001 RAL-774_125 2757 chrX 10686022 10686077 chrX 10691209 10691258 roo 10 5184 2.5 0.0 1.2 4.5 5236 chrX 10686022 intron X11Lbeta + chrX 10688640 intron X11Lbeta + chrX 10691258 intron X11Lbeta + chrX_10_10685001 chrX_10685001 RAL-774_125 2758 chrX 10772679 10772694 chrX 10772758 10772795 Tirant 5 106 6.0 1.5 3.8 1.0 116 chrX 10772679 intron CG15211 + chrX 10772737 intron CG15211 + chrX 10772795 intron CG15211 + chrX_5_10770001 chrX_10770001 RAL-774_125 2759 chrX 10802988 10803041 chrX 10803123 10803123 11 127 4.0 5.0 4.5 2.0 135 chrX 10802988 intron Imp - chrX 10803056 intron Imp - chrX 10803123 intron Imp - chrX_11_10800001 chrX_10800001 RAL-774_125 2760 chrX 11007512 11007553 chrX 11007646 11007693 10 139 5.0 2.0 3.5 2.2 181 chrX 11007512 intron CG42339 - chrX 11007602 intron CG42339 - chrX 11007693 intron CG42339 - chrX_10_11005001 chrX_11005001 RAL-774_125 2761 chrX 11062410 11062469 chrX 11062543 11062614 10 138 5.5 1.5 3.5 2.2 204 chrX 11062410 exon CG1537 - chrX 11062512 intron CG1537 - chrX 11062614 intron CG1537 - chrX_10_11060001 chrX_11060001 RAL-774_125 2762 chrX 11095957 11096016 chrX 11103109 11103168 HMS-Beagle 7 7151 5.0 3.0 4.0 1.4 7211 chrX 11095957 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103168 intron CG42249 + chrX_7_11095001 chrX_11095001 RAL-774_125 2763 chrX 11184207 11184257 chrX 11189333 11189380 flea 5 5120 3.0 4.0 3.5 1.1 5173 chrX 11184207 intergenic not near genes chrX 11186794 intergenic not near genes chrX 11189380 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-774_125 2764 chrX 11212824 11212889 chrX 11212967 11213019 8 137 2.5 4.5 3.5 1.8 195 chrX 11212824 intergenic not near genes chrX 11212922 intergenic not near genes chrX 11213019 intergenic not near genes chrX_8_11210001 chrX_11210001 RAL-774_125 2765 chrX 11284796 11284856 chrX 11284926 11284981 10 126 7.0 6.0 6.5 1.3 185 chrX 11284796 intron CG44422 - chrX 11284888 intron CG44422 - chrX 11284981 intron CG44422 - chrX_10_11280001 chrX_11280001 RAL-774_125 2766 chrX 11535010 11535045 chrX 11541530 11541564 Burdock 8 6517 6.0 7.5 6.8 1.0 6554 chrX 11535010 intron Drak + chrX 11538287 intron Drak + chrX 11541564 intron Drak + chrX_8_11535001 chrX_11535001 RAL-774_125 2767 chrX 11571421 11571483 chrX 11571708 11571770 pogo 17 286 5.5 5.0 5.2 2.7 349 chrX 11571421 3` UTR Kmn1 - chrX 11571596 3` UTR Kmn1 - chrX 11571770 3` UTR Kmn1 - chrX_17_11570001 chrX_11570001 RAL-774_125 2768 chrX 11633375 11633423 chrX 11640479 11640527 297 9 7103 4.0 5.0 4.5 1.6 7152 chrX 11633375 intron Ptp10D + chrX 11636951 intron Ptp10D + chrX 11640527 intron Ptp10D + chrX_9_11635001 chrX_11635001 RAL-774_125 2769 chrX 11645074 11645130 chrX 11648288 11648345 NOF 6 3218 1.5 1.0 1.2 2.7 3271 chrX 11645074 intron Ptp10D + chrX 11646710 intron Ptp10D + chrX 11648345 intron Ptp10D + chrX_6_11645001 chrX_11645001 RAL-774_125 2770 chrX 11798985 11799026 chrX 11799121 11799160 5 136 3.5 3.5 3.5 1.1 175 chrX 11798985 intron CkIIbeta + chrX 11799072 intron CkIIbeta + chrX 11799160 intron CkIIbeta + chrX_5_11795001 chrX_11795001 RAL-774_125 2771 chrX 11804661 11804671 chrX 11804815 11804825 4 154 4.5 7.5 6.0 0.6 164 chrX 11804661 intron Hsc70-3 - chrX 11804743 intron Hsc70-3 - chrX 11804825 intron Hsc70-3 - chrX_4_11800001 chrX_11800001 RAL-774_125 2772 chrX 11822167 11822209 chrX 11822356 11822393 4 187 2.5 3.5 3.0 1.0 226 chrX 11822167 intron rudhira + chrX 11822280 intron rudhira + chrX 11822393 intron rudhira + chrX_4_11820001 chrX_11820001 RAL-774_125 2773 chrX 11922320 11922382 chrX 11922497 11922565 15 181 2.0 5.0 3.5 3.3 245 chrX 11922320 exon Sclp - chrX 11922442 intron Sclp - chrX 11922565 intron Sclp - chrX_15_11920001 chrX_11920001 RAL-774_125 2774 chrX 11945034 11945084 chrX 11945187 11945231 4 150 1.0 4.0 2.5 1.1 197 chrX 11945034 intron cac - chrX 11945132 intron cac - chrX 11945231 intron cac - chrX_4_11945001 chrX_11945001 RAL-774_125 2775 chrX 12041143 12041204 chrX 12041615 12041676 13 478 2.5 2.5 2.5 3.7 533 chrX 12041143 intergenic not near genes chrX 12041410 intergenic not near genes chrX 12041676 intergenic not near genes chrX_13_12040001 chrX_12040001 RAL-774_125 2776 chrX 12043801 12043850 chrX 12043940 12043980 8 136 5.0 8.0 6.5 1.1 179 chrX 12043801 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043890 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043980 5` UTR,5` UTR CR43960 +,Ten-a + chrX_8_12040001 chrX_12040001 RAL-774_125 2777 chrX 12053499 12053552 chrX 12054077 12054118 13 571 1.0 5.0 3.0 3.2 619 chrX 12053499 intron,intron CR43960 +,Ten-a + chrX 12053808 intron,intron CR43960 +,Ten-a + chrX 12054118 intron,intron CR43960 +,Ten-a + chrX_13_12050001 chrX_12050001 RAL-774_125 2778 chrX 12136418 12136493 chrX 12136546 12136619 4 129 0.0 1.5 0.8 2.2 201 chrX 12136418 intron Ten-a + chrX 12136518 intron Ten-a + chrX 12136619 intron Ten-a + chrX_4_12135001 chrX_12135001 RAL-774_125 2779 chrX 12176723 12176762 chrX 12176833 12176873 10 120 0.0 6.0 3.0 2.5 150 chrX 12176723 intron,3` UTR Ten-a +,CG1924 - chrX 12176798 intron,3` UTR Ten-a +,CG1924 - chrX 12176873 intron,3` UTR Ten-a +,CG1924 - chrX_10_12175001 chrX_12175001 RAL-774_125 2780 chrX 12202727 12202792 chrX 12202861 12202912 8 130 2.0 1.5 1.8 2.9 185 chrX 12202727 intron Ten-a + chrX 12202820 intron Ten-a + chrX 12202912 intron Ten-a + chrX_8_12200001 chrX_12200001 RAL-774_125 2781 chrX 12277145 12277210 chrX 12277281 12277352 11 139 4.0 6.5 5.2 1.8 207 chrX 12277145 intron Ten-a + chrX 12277248 intron Ten-a + chrX 12277352 intron Ten-a + chrX_11_12275001 chrX_12275001 RAL-774_125 2782 chrX 12352574 12352627 chrX 12352706 12352754 6 129 2.5 2.0 2.2 1.9 180 chrX 12352574 intergenic not near genes chrX 12352664 intergenic not near genes chrX 12352754 intergenic not near genes chrX_6_12350001 chrX_12350001 RAL-774_125 2783 chrX 12375447 12375504 chrX 12375595 12375650 9 143 4.5 2.0 3.2 2.1 203 chrX 12375447 intergenic Ir11a - chrX 12375548 intergenic Ir11a - chrX 12375650 exon Ir11a - chrX_9_12375001 chrX_12375001 RAL-774_125 2784 chrX 12381814 12381895 chrX 12385777 12385847 flea 7 3960 1.5 4.0 2.8 1.8 4033 chrX 12381814 intergenic not near genes chrX 12383830 intergenic not near genes chrX 12385847 intergenic not near genes chrX_7_12380001 chrX_12380001 RAL-774_125 2785 chrX 12393347 12393366 chrX 12393436 12393456 4 100 0.5 0.5 0.5 2.7 109 chrX 12393347 intergenic not near genes chrX 12393402 intergenic not near genes chrX 12393456 intergenic not near genes chrX_4_12390001 chrX_12390001 RAL-774_125 2786 chrX 12421200 12421229 chrX 12421335 12421364 5 135 3.0 2.0 2.5 1.4 164 chrX 12421200 intergenic not near genes chrX 12421282 intergenic not near genes chrX 12421364 intergenic not near genes chrX_5_12420001 chrX_12420001 RAL-774_125 2787 chrX 12511276 12511340 chrX 12511406 12511473 6 129 0.0 4.0 2.0 2.0 197 chrX 12511276 intron CG2556 + chrX 12511374 intron CG2556 + chrX 12511473 intron CG2556 + chrX_6_12510001 chrX_12510001 RAL-774_125 2788 chrX 12528819 12528884 chrX 12528945 12529000 4 124 2.5 0.5 1.5 1.6 181 chrX 12528819 intron CG43921 - chrX 12528910 intron CG43921 - chrX 12529000 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-774_125 2789 chrX 12532600 12532670 chrX 12532796 12532841 6 180 2.0 0.5 1.2 2.7 241 chrX 12532600 intron CG43921 - chrX 12532720 intron CG43921 - chrX 12532841 intron CG43921 - chrX_6_12530001 chrX_12530001 RAL-774_125 2790 chrX 12694151 12694187 chrX 12694282 12694312 5 129 5.0 6.0 5.5 0.8 161 chrX 12694151 intron Smr - chrX 12694232 intron Smr - chrX 12694312 intron Smr - chrX_5_12690001 chrX_12690001 RAL-774_125 2791 chrX 12752237 12752301 chrX 12752374 12752438 6 134 4.5 5.0 4.8 1.0 201 chrX 12752237 5` UTR CR44619 + chrX 12752338 5` UTR CR44619 + chrX 12752438 intron CR44619 + chrX_6_12750001 chrX_12750001 RAL-774_125 2792 chrX 12754662 12754669 chrX 12754894 12754907 4 234 7.5 11.0 9.2 0.4 245 chrX 12754662 intergenic CR44619 + chrX 12754784 intergenic CR44619 + chrX 12754907 intergenic CR44619 + chrX_4_12750001 chrX_12750001 RAL-774_125 2793 chrX 12930557 12930587 chrX 12937721 12937751 HMS-Beagle 5 7164 5.5 8.0 6.8 0.6 7194 chrX 12930557 intron fne + chrX 12934154 intron fne + chrX 12937751 intron fne + chrX_5_12930001 chrX_12930001 RAL-774_125 2794 chrX 12971645 12971711 chrX 12971771 12971788 8 117 3.5 4.0 3.8 1.7 143 chrX 12971645 intron,exon CR43636 -,CG15721 + chrX 12971716 intron,exon CR43636 -,CG15721 + chrX 12971788 intron,exon CR43636 -,CG15721 + chrX_8_12970001 chrX_12970001 RAL-774_125 2795 chrX 13058410 13058433 chrX 13058597 13058613 4 184 8.0 3.5 5.8 0.6 203 chrX 13058410 intron rad + chrX 13058512 intron rad + chrX 13058613 intron rad + chrX_4_13055001 chrX_13055001 RAL-774_125 2796 chrX 13061325 13061361 chrX 13061476 13061513 5 155 6.0 3.0 4.5 0.9 188 chrX 13061325 intron rad + chrX 13061419 intron rad + chrX 13061513 intron rad + chrX_5_13060001 chrX_13060001 RAL-774_125 2797 chrX 13106218 13106273 chrX 13106353 13106393 7 123 3.5 4.5 4.0 1.4 175 chrX 13106218 intron CG43313 - chrX 13106306 intron CG43313 - chrX 13106393 intron CG43313 - chrX_7_13105001 chrX_13105001 RAL-774_125 2798 chrX 13146570 13146625 chrX 13146708 13146763 7 138 2.0 5.5 3.8 1.5 193 chrX 13146570 intron CG32645 + chrX 13146666 intron CG32645 + chrX 13146763 intron CG32645 + chrX_7_13145001 chrX_13145001 RAL-774_125 2799 chrX 13168520 13168570 chrX 13168671 13168714 7 149 5.0 6.0 5.5 1.1 194 chrX 13168520 intron CG34411 - chrX 13168617 intron CG34411 - chrX 13168714 intron CG34411 - chrX_7_13165001 chrX_13165001 RAL-774_125 2800 chrX 13262638 13262697 chrX 13262773 13262832 6 133 1.5 2.0 1.8 2.1 194 chrX 13262638 intergenic HDAC4 -,comt + chrX 13262735 3` UTR HDAC4 - chrX 13262832 3` UTR HDAC4 - chrX_6_13260001 chrX_13260001 RAL-774_125 2801 chrX 13272130 13272180 chrX 13272257 13272299 11 122 5.5 6.5 6.0 1.6 169 chrX 13272130 intron HDAC4 - chrX 13272214 intron HDAC4 - chrX 13272299 intron HDAC4 - chrX_11_13270001 chrX_13270001 RAL-774_125 2802 chrX 13401461 13401502 chrX 13401863 13401904 jockey 4 398 1.5 2.0 1.8 1.4 443 chrX 13401461 intergenic CG1673 +,CG12725 - chrX 13401682 intergenic CG12725 -,CG1673 + chrX 13401904 3` UTR CG12725 - chrX_4_13400001 chrX_13400001 RAL-774_125 2803 chrX 13429413 13429483 chrX 13430612 13430682 jockey 7 1193 0.0 3.5 1.8 2.5 1269 chrX 13429413 intergenic not near genes chrX 13430048 intergenic not near genes chrX 13430682 intergenic not near genes chrX_7_13430001 chrX_13430001 RAL-774_125 2804 chrX 13463608 13463668 chrX 13469229 13469280 mdg3 11 5624 3.0 4.0 3.5 2.4 5672 chrX 13463608 intron Neto + chrX 13466444 intron Neto + chrX 13469280 intron Neto + chrX_11_13465001 chrX_13465001 RAL-774_125 2805 chrX 13471311 13471391 chrX 13471440 13471514 7 128 3.5 1.5 2.5 2.0 203 chrX 13471311 intron Neto + chrX 13471412 intron Neto + chrX 13471514 intron Neto + chrX_7_13470001 chrX_13470001 RAL-774_125 2806 chrX 13734047 13734111 chrX 13734192 13734249 11 136 1.0 5.5 3.2 2.6 202 chrX 13734047 intron g - chrX 13734148 intron g - chrX 13734249 intron g - chrX_11_13730001 chrX_13730001 RAL-774_125 2807 chrX 13821434 13821474 chrX 13821553 13821596 14 119 1.5 4.5 3.0 3.5 162 chrX 13821434 intron Clic - chrX 13821515 intron Clic - chrX 13821596 intron Clic - chrX_14_13820001 chrX_13820001 RAL-774_125 2808 chrX 13843355 13843395 chrX 13843543 13843592 11 191 4.0 7.5 5.8 1.6 237 chrX 13843355 intron AMPdeam - chrX 13843474 intron AMPdeam - chrX 13843592 intron AMPdeam - chrX_11_13840001 chrX_13840001 RAL-774_125 2809 chrX 13934251 13934310 chrX 13934385 13934438 5 126 5.0 5.0 5.0 0.8 187 chrX 13934251 intron mamo - chrX 13934344 intron mamo - chrX 13934438 intron mamo - chrX_5_13930001 chrX_13930001 RAL-774_125 2810 chrX 14104993 14105049 chrX 14114186 14114228 roo 7 9189 3.5 6.5 5.0 1.2 9235 chrX 14104993 intergenic not near genes chrX 14109610 intergenic not near genes chrX 14114228 5` UTR CR44657 + chrX_7_14105001 chrX_14105001 RAL-774_125 2811 chrX 14203598 14203649 chrX 14203725 14203778 9 134 1.0 4.0 2.5 2.6 180 chrX 14203598 exon l(1)G0007 + chrX 14203688 intron l(1)G0007 + chrX 14203778 intron l(1)G0007 + chrX_9_14200001 chrX_14200001 RAL-774_125 2812 chrX 14209418 14209485 chrX 14209559 14209624 12 138 5.0 2.5 3.8 2.5 206 chrX 14209418 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209521 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209624 intron,intron l(1)G0007 +,l(1)G0469 - chrX_12_14205001 chrX_14205001 RAL-774_125 2813 chrX 14300759 14300830 chrX 14300887 14300951 15 119 3.0 3.0 3.0 3.8 192 chrX 14300759 intergenic not near genes chrX 14300855 intergenic not near genes chrX 14300951 intergenic not near genes chrX_15_14300001 chrX_14300001 RAL-774_125 2814 chrX 14327566 14327627 chrX 14327703 14327759 12 131 5.5 9.0 7.2 1.5 193 chrX 14327566 intron dpr8 + chrX 14327662 intron dpr8 + chrX 14327759 intron dpr8 + chrX_12_14325001 chrX_14325001 RAL-774_125 2815 chrX 14331720 14331793 chrX 14332100 14332155 9 379 1.5 2.5 2.0 3.0 435 chrX 14331720 intron dpr8 + chrX 14331938 intron dpr8 + chrX 14332155 intron dpr8 + chrX_9_14330001 chrX_14330001 RAL-774_125 2816 chrX 14333257 14333315 chrX 14333368 14333409 9 116 1.0 4.0 2.5 2.6 152 chrX 14333257 intron dpr8 + chrX 14333333 intron dpr8 + chrX 14333409 intron dpr8 + chrX_9_14330001 chrX_14330001 RAL-774_125 2817 chrX 14353408 14353464 chrX 14353534 14353546 9 118 2.0 2.5 2.2 2.8 138 chrX 14353408 intron dpr8 + chrX 14353477 intron dpr8 + chrX 14353546 intron dpr8 + chrX_9_14350001 chrX_14350001 RAL-774_125 2818 chrX 14381366 14381383 chrX 14381570 14381587 4 204 2.0 0.5 1.2 1.8 221 chrX 14381366 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381476 intron dpr8 + chrX 14381587 intron dpr8 + chrX_4_14380001 chrX_14380001 RAL-774_125 2819 chrX 14383925 14383943 chrX 14384054 14384062 4 124 5.0 7.5 6.2 0.6 137 chrX 14383925 intron dpr8 + chrX 14383994 intron dpr8 + chrX 14384062 intron dpr8 + chrX_4_14380001 chrX_14380001 RAL-774_125 2820 chrX 14404984 14405014 chrX 14405107 14405142 5 126 2.5 1.5 2.0 1.7 158 chrX 14404984 intron dpr8 + chrX 14405063 intron dpr8 + chrX 14405142 intron dpr8 + chrX_5_14405001 chrX_14405001 RAL-774_125 2821 chrX 14416269 14416315 chrX 14421086 14421132 F-element 9 4814 3.5 3.0 3.2 2.1 4863 chrX 14416269 intron dpr8 + chrX 14418700 intron dpr8 + chrX 14421132 intron dpr8 + chrX_9_14415001 chrX_14415001 RAL-774_125 2822 chrX 14484942 14484996 chrX 14485081 14485120 6 136 0.0 5.5 2.8 1.6 178 chrX 14484942 intergenic not near genes chrX 14485031 intergenic not near genes chrX 14485120 intergenic not near genes chrX_6_14485001 chrX_14485001 RAL-774_125 2823 chrX 14500235 14500294 chrX 14500363 14500422 6 128 4.0 3.5 3.8 1.2 187 chrX 14500235 intergenic not near genes chrX 14500328 intergenic not near genes chrX 14500422 intergenic not near genes chrX_6_14500001 chrX_14500001 RAL-774_125 2824 chrX 14570028 14570105 chrX 14570160 14570231 5 131 3.0 0.0 1.5 2.0 203 chrX 14570028 intergenic not near genes chrX 14570130 intergenic not near genes chrX 14570231 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-774_125 2825 chrX 14593761 14593824 chrX 14593883 14593956 6 130 1.5 1.5 1.5 2.4 195 chrX 14593761 intron CG9413 - chrX 14593858 intron CG9413 - chrX 14593956 intron CG9413 - chrX_6_14590001 chrX_14590001 RAL-774_125 2826 chrX 14628146 14628212 chrX 14628280 14628342 12 134 4.0 3.5 3.8 2.5 196 chrX 14628146 intron NetA - chrX 14628244 intron NetA - chrX 14628342 intron NetA - chrX_12_14625001 chrX_14625001 RAL-774_125 2827 chrX 14636419 14636477 chrX 14641910 14641968 I-element 8 5486 4.5 5.5 5.0 1.3 5549 chrX 14636419 intron NetA - chrX 14639194 intron NetA - chrX 14641968 intron NetA - chrX_8_14635001 chrX_14635001 RAL-774_125 2828 chrX 14774941 14775012 chrX 14775062 14775139 6 126 3.5 2.5 3.0 1.5 198 chrX 14774941 intergenic CG5334 + chrX 14775040 intergenic CG5334 + chrX 14775139 intergenic CG5334 + chrX_6_14775001 chrX_14775001 RAL-774_125 2829 chrX 14777998 14778043 chrX 14782835 14782890 Doc 5 4845 3.5 4.5 4.0 1.0 4892 chrX 14777998 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782890 intergenic Ag5r2 - chrX_5_14780001 chrX_14780001 RAL-774_125 2830 chrX 14808309 14808318 chrX 14808426 14808440 4 124 4.5 1.0 2.8 1.1 131 chrX 14808309 intron rut - chrX 14808374 intron rut - chrX 14808440 intron rut - chrX_4_14805001 chrX_14805001 RAL-774_125 2831 chrX 14810564 14810579 chrX 14810692 14810707 4 126 5.0 2.0 3.5 0.9 143 chrX 14810564 intron rut - chrX 14810636 intron rut - chrX 14810707 intron rut - chrX_4_14810001 chrX_14810001 RAL-774_125 2832 chrX 14818718 14818792 chrX 14823967 14824039 copia 12 5249 2.0 0.5 1.2 5.5 5321 chrX 14818718 intron rut - chrX 14821378 intron rut - chrX 14824039 intron rut - chrX_12_14820001 chrX_14820001 RAL-774_125 2833 chrX 14825345 14825376 chrX 14825445 14825488 6 110 4.5 3.5 4.0 1.2 143 chrX 14825345 intron rut - chrX 14825416 intron rut - chrX 14825488 intron rut - chrX_6_14825001 chrX_14825001 RAL-774_125 2834 chrX 14861937 14861989 chrX 14862101 14862158 11 168 26.0 23.5 24.8 0.4 221 chrX 14861937 intron Flo2 + chrX 14862048 intron Flo2 + chrX 14862158 intron Flo2 + chrX_11_14860001 chrX_14860001 RAL-774_125 2835 chrX 14888904 14888966 chrX 14889040 14889097 8 134 1.5 2.5 2.0 2.7 193 chrX 14888904 intron,intron Flo2 +,CG9514 - chrX 14889000 intron,intron Flo2 +,CG9514 - chrX 14889097 intron,intron Flo2 +,CG9514 - chrX_8_14885001 chrX_14885001 RAL-774_125 2836 chrX 14900800 14900871 chrX 14901042 14901083 16 239 3.0 5.0 4.0 3.2 283 chrX 14900800 intron Flo2 + chrX 14900942 intron Flo2 + chrX 14901083 intron Flo2 + chrX_16_14900001 chrX_14900001 RAL-774_125 2837 chrX 14936824 14936893 chrX 14946131 14946157 roo 6 9300 4.5 2.5 3.5 1.3 9333 chrX 14936824 intron pdgy - chrX 14941490 intron pdgy - chrX 14946157 intron pdgy - chrX_6_14940001 chrX_14940001 RAL-774_125 2838 chrX 14960357 14960418 chrX 14960543 14960609 10 189 1.0 4.0 2.5 2.9 252 chrX 14960357 intron eag + chrX 14960483 intron eag + chrX 14960609 intron eag + chrX_10_14960001 chrX_14960001 RAL-774_125 2839 chrX 14981685 14981732 chrX 14981809 14981861 5 127 2.5 3.5 3.0 1.2 176 chrX 14981685 intron eag + chrX 14981773 intron eag + chrX 14981861 intron eag + chrX_5_14980001 chrX_14980001 RAL-774_125 2840 chrX 15019094 15019135 chrX 15019242 15019283 6 148 2.5 0.0 1.2 2.7 189 chrX 15019094 intron hiw - chrX 15019188 intron hiw - chrX 15019283 intron hiw - chrX_6_15015001 chrX_15015001 RAL-774_125 2841 chrX 15107622 15107662 chrX 15107785 15107795 12 172 4.0 5.5 4.8 2.1 173 chrX 15107622 intron Rab3-GEF + chrX 15107708 intron Rab3-GEF + chrX 15107795 intron Rab3-GEF + chrX_12_15105001 chrX_15105001 RAL-774_125 2842 chrX 15153397 15153457 chrX 15153587 15153660 8 199 1.0 2.5 1.8 2.9 263 chrX 15153397 intron CG9095 - chrX 15153528 intron CG9095 - chrX 15153660 intron CG9095 - chrX_8_15150001 chrX_15150001 RAL-774_125 2843 chrX 15234322 15234382 chrX 15234450 15234515 10 132 3.5 1.0 2.2 3.1 193 chrX 15234322 intergenic not near genes chrX 15234418 intergenic not near genes chrX 15234515 intergenic not near genes chrX_10_15230001 chrX_15230001 RAL-774_125 2844 chrX 15256477 15256527 chrX 15256690 15256754 14 223 4.0 7.0 5.5 2.2 277 chrX 15256477 intergenic not near genes chrX 15256616 intergenic not near genes chrX 15256754 intergenic not near genes chrX_14_15255001 chrX_15255001 RAL-774_125 2845 chrX 15273701 15273729 chrX 15274897 15274939 1360 4 1206 6.0 6.0 6.0 0.6 1238 chrX 15273701 intergenic not near genes chrX 15274320 intergenic not near genes chrX 15274939 intergenic not near genes chrX_4_15270001 chrX_15270001 RAL-774_125 2846 chrX 15326685 15326713 chrX 15326933 15326961 I-element 5 247 0.5 1.5 1.0 2.5 276 chrX 15326685 3` UTR Top1 + chrX 15326823 3` UTR Top1 + chrX 15326961 3` UTR Top1 + chrX_5_15325001 chrX_15325001 RAL-774_125 2847 chrX 15413042 15413072 chrX 15417372 15417424 Juan 5 4340 2.0 5.0 3.5 1.1 4382 chrX 15413042 intron Cngl - chrX 15415233 intron Cngl - chrX 15417424 intron Cngl - chrX_5_15415001 chrX_15415001 RAL-774_125 2848 chrX 15526243 15526314 chrX 15526506 15526577 11 260 0.5 5.5 3.0 2.8 334 chrX 15526243 intron Ac13E - chrX 15526410 intron Ac13E - chrX 15526577 intron Ac13E - chrX_11_15525001 chrX_15525001 RAL-774_125 2849 chrX 15536628 15536701 chrX 15536787 15536847 18 155 3.0 6.5 4.8 3.1 219 chrX 15536628 intron Ac13E - chrX 15536738 intron Ac13E - chrX 15536847 intron Ac13E - chrX_18_15535001 chrX_15535001 RAL-774_125 2850 chrX 15565597 15565663 chrX 15565733 15565799 5 136 3.5 2.0 2.8 1.3 202 chrX 15565597 intergenic not near genes chrX 15565698 intergenic not near genes chrX 15565799 intergenic not near genes chrX_5_15565001 chrX_15565001 RAL-774_125 2851 chrX 15589417 15589451 chrX 15589646 15589670 6 224 5.5 7.0 6.2 0.8 253 chrX 15589417 intron CG9220 - chrX 15589544 intron CG9220 - chrX 15589670 exon CG9220 - chrX_6_15585001 chrX_15585001 RAL-774_125 2852 chrX 15596097 15596115 chrX 15596281 15596299 6 181 0.5 4.0 2.2 1.9 202 chrX 15596097 intergenic not near genes chrX 15596198 intergenic not near genes chrX 15596299 intergenic not near genes chrX_6_15595001 chrX_15595001 RAL-774_125 2853 chrX 15623460 15623470 chrX 15623581 15623601 5 127 14.5 5.0 9.8 0.5 141 chrX 15623460 intron sog - chrX 15623530 intron sog - chrX 15623601 intron sog - chrX_5_15620001 chrX_15620001 RAL-774_125 2854 chrX 15678697 15678712 chrX 15678804 15678839 4 122 1.5 5.5 3.5 0.9 142 chrX 15678697 intergenic not near genes chrX 15678768 intergenic not near genes chrX 15678839 intergenic not near genes chrX_4_15675001 chrX_15675001 RAL-774_125 2855 chrX 15759466 15759529 chrX 15759592 15759655 6 123 4.0 3.5 3.8 1.2 189 chrX 15759466 intron Graf - chrX 15759560 intron Graf - chrX 15759655 intron Graf - chrX_6_15755001 chrX_15755001 RAL-774_125 2856 chrX 15939222 15939294 chrX 15939357 15939429 7 135 3.0 3.0 3.0 1.8 207 chrX 15939222 5` UTR Stim - chrX 15939326 intron Stim - chrX 15939429 intron Stim - chrX_7_15935001 chrX_15935001 RAL-774_125 2857 chrX 16100555 16100573 chrX 16100644 16100697 8 122 3.5 4.0 3.8 1.7 142 chrX 16100555 intron,intron CG42353 -,CG42354 - chrX 16100626 intron,intron CG42353 -,CG42354 - chrX 16100697 intron,intron CG42353 -,CG42354 - chrX_8_16100001 chrX_16100001 RAL-774_125 2858 chrX 16222748 16222795 chrX 16231143 16231195 roo 9 8398 0.0 3.0 1.5 3.6 8447 chrX 16222748 intergenic not near genes chrX 16226972 intergenic not near genes chrX 16231195 intergenic not near genes chrX_9_16225001 chrX_16225001 RAL-774_125 2859 chrX 16295483 16295548 chrX 16295617 16295676 7 132 1.0 0.0 0.5 4.7 193 chrX 16295483 intron CG9911 - chrX 16295580 intron CG9911 - chrX 16295676 intron CG9911 - chrX_7_16295001 chrX_16295001 RAL-774_125 2860 chrX 16340619 16340653 chrX 16349824 16349858 roo 5 9201 4.0 3.5 3.8 1.0 9239 chrX 16340619 3` UTR Dsp1 + chrX 16345238 intergenic not near genes chrX 16349858 intergenic sl + chrX_5_16345001 chrX_16345001 RAL-774_125 2861 chrX 16407143 16407216 chrX 16407270 16407326 16 124 3.0 1.5 2.2 5.0 183 chrX 16407143 intron CG4301 + chrX 16407234 intron CG4301 + chrX 16407326 intron CG4301 + chrX_16_16405001 chrX_16405001 RAL-774_125 2862 chrX 16492609 16492671 chrX 16498231 16498298 mdg3 17 5624 5.5 3.5 4.5 3.1 5689 chrX 16492609 intron para - chrX 16495454 intron para - chrX 16498298 exon para - chrX_17_16495001 chrX_16495001 RAL-774_125 2863 chrX 16529357 16529432 chrX 16529520 16529593 11 161 1.0 4.5 2.8 2.9 236 chrX 16529357 intron para - chrX 16529475 intron para - chrX 16529593 intron para - chrX_11_16525001 chrX_16525001 RAL-774_125 2864 chrX 16674709 16674783 chrX 16674872 16674938 8 162 4.0 1.5 2.8 2.1 229 chrX 16674709 intron CG13012 - chrX 16674824 intron CG13012 - chrX 16674938 intron CG13012 - chrX_8_16670001 chrX_16670001 RAL-774_125 2865 chrX 16689584 16689640 chrX 16689720 16689741 10 128 5.5 3.0 4.2 1.9 157 chrX 16689584 intron Sep4 - chrX 16689662 intron Sep4 - chrX 16689741 intron Sep4 - chrX_10_16685001 chrX_16685001 RAL-774_125 2866 chrX 16821187 16821256 chrX 16821317 16821386 6 130 3.5 0.0 1.8 2.1 199 chrX 16821187 intron CG4829 + chrX 16821286 intron CG4829 + chrX 16821386 intron CG4829 + chrX_6_16820001 chrX_16820001 RAL-774_125 2867 chrX 16867754 16867774 chrX 16867882 16867902 5 128 4.0 5.0 4.5 0.9 148 chrX 16867754 intron CG13003 - chrX 16867828 intron CG13003 - chrX 16867902 intron CG13003 - chrX_5_16865001 chrX_16865001 RAL-774_125 2868 chrX 16898053 16898112 chrX 16898183 16898241 9 124 6.0 3.0 4.5 1.6 188 chrX 16898053 intergenic not near genes chrX 16898147 intergenic not near genes chrX 16898241 intergenic not near genes chrX_9_16895001 chrX_16895001 RAL-774_125 2869 chrX 16951299 16951309 chrX 16951408 16951435 5 113 7.5 6.0 6.8 0.6 136 chrX 16951299 exon RhoGAP15B + chrX 16951367 exon RhoGAP15B + chrX 16951435 exon RhoGAP15B + chrX_5_16950001 chrX_16950001 RAL-774_125 2870 chrX 16951311 16951352 chrX 16951404 16951468 12 106 4.0 6.0 5.0 2.0 157 chrX 16951311 exon RhoGAP15B + chrX 16951390 exon RhoGAP15B + chrX 16951468 exon RhoGAP15B + chrX_12_16950001 chrX_16950001 RAL-774_125 2871 chrX 17011961 17011992 chrX 17012064 17012112 4 121 4.0 4.0 4.0 0.8 151 chrX 17011961 intron CG45002 - chrX 17012036 intron CG45002 - chrX 17012112 intron CG45002 - chrX_4_17010001 chrX_17010001 RAL-774_125 2872 chrX 17063146 17063204 chrX 17063277 17063341 9 134 3.0 4.5 3.8 1.9 195 chrX 17063146 intron CG45002 - chrX 17063244 intron CG45002 - chrX 17063341 intron CG45002 - chrX_9_17060001 chrX_17060001 RAL-774_125 2873 chrX 17088136 17088199 chrX 17088779 17088842 5 643 2.0 3.0 2.5 1.4 706 chrX 17088136 intergenic CG8945 - chrX 17088489 intergenic not near genes chrX 17088842 intergenic not near genes chrX_5_17085001 chrX_17085001 RAL-774_125 2874 chrX 17195220 17195229 chrX 17200304 17200358 flea 7 5127 4.0 3.5 3.8 1.5 5138 chrX 17195220 3` UTR baz + chrX 17197789 3` UTR baz + chrX 17200358 3` UTR baz + chrX_7_17195001 chrX_17195001 RAL-774_125 2875 chrX 17205799 17205855 chrX 17205939 17205995 8 140 3.0 4.0 3.5 1.8 196 chrX 17205799 intergenic not near genes chrX 17205897 intergenic not near genes chrX 17205995 intergenic CG32564 + chrX_8_17205001 chrX_17205001 RAL-774_125 2876 chrX 17234243 17234292 chrX 17234354 17234439 6 137 3.5 0.0 1.8 2.1 196 chrX 17234243 intron f + chrX 17234341 intron f + chrX 17234439 intron f + chrX_6_17230001 chrX_17230001 RAL-774_125 2877 chrX 17335676 17335701 chrX 17335815 17335843 5 138 6.0 3.0 4.5 0.9 167 chrX 17335676 intergenic not near genes chrX 17335760 intergenic not near genes chrX 17335843 intergenic not near genes chrX_5_17335001 chrX_17335001 RAL-774_125 2878 chrX 17352556 17352616 chrX 17352700 17352769 8 147 0.0 5.5 2.8 2.1 213 chrX 17352556 intergenic not near genes chrX 17352662 intergenic not near genes chrX 17352769 intergenic not near genes chrX_8_17350001 chrX_17350001 RAL-774_125 2879 chrX 17357488 17357525 chrX 17357632 17357654 4 140 4.0 2.5 3.2 1.0 166 chrX 17357488 intergenic not near genes chrX 17357571 intergenic not near genes chrX 17357654 intergenic not near genes chrX_4_17355001 chrX_17355001 RAL-774_125 2880 chrX 17362444 17362484 chrX 17362585 17362626 5 140 3.0 4.0 3.5 1.1 182 chrX 17362444 intergenic not near genes chrX 17362535 intergenic not near genes chrX 17362626 intergenic not near genes chrX_5_17360001 chrX_17360001 RAL-774_125 2881 chrX 17431314 17431335 chrX 17431705 17431713 jockey 6 388 6.0 3.0 4.5 1.1 399 chrX 17431314 intron CG12994 - chrX 17431514 intron CG12994 - chrX 17431713 intron CG12994 - chrX_6_17430001 chrX_17430001 RAL-774_125 2882 chrX 17502304 17502372 chrX 17502434 17502484 12 128 3.0 4.5 3.8 2.5 180 chrX 17502304 intron CG43658 - chrX 17502394 intron CG43658 - chrX 17502484 intron CG43658 - chrX_12_17500001 chrX_17500001 RAL-774_125 2883 chrX 17546926 17546995 chrX 17547109 17547172 11 182 0.0 3.5 1.8 3.9 246 chrX 17546926 intron CG43658 - chrX 17547049 intron CG43658 - chrX 17547172 intron CG43658 - chrX_11_17545001 chrX_17545001 RAL-774_125 2884 chrX 17680895 17680921 chrX 17681022 17681042 9 125 3.5 8.0 5.8 1.3 147 chrX 17680895 intron chas - chrX 17680968 intron chas - chrX 17681042 intron chas - chrX_9_17680001 chrX_17680001 RAL-774_125 2885 chrX 17685409 17685471 chrX 17685542 17685604 8 132 1.5 3.0 2.2 2.5 195 chrX 17685409 intron chas - chrX 17685506 intron chas - chrX 17685604 intron chas - chrX_8_17685001 chrX_17685001 RAL-774_125 2886 chrX 17708783 17708853 chrX 17708910 17708994 4 129 5.5 0.0 2.8 1.1 211 chrX 17708783 intron CG8173 - chrX 17708888 intron CG8173 - chrX 17708994 intron CG8173 - chrX_4_17705001 chrX_17705001 RAL-774_125 2887 chrX 17730535 17730580 chrX 17730701 17730730 5 162 5.5 1.0 3.2 1.2 195 chrX 17730535 intron CG42684 + chrX 17730632 intron CG42684 + chrX 17730730 intron CG42684 + chrX_5_17730001 chrX_17730001 RAL-774_125 2888 chrX 17766342 17766368 chrX 17766460 17766512 5 140 3.5 1.0 2.2 1.6 170 chrX 17766342 intergenic not near genes chrX 17766427 intergenic not near genes chrX 17766512 intergenic not near genes chrX_5_17765001 chrX_17765001 RAL-774_125 2889 chrX 17911811 17911871 chrX 17911947 17912009 4 135 1.5 1.0 1.2 1.8 198 chrX 17911811 intron CG6847 + chrX 17911910 intron CG6847 + chrX 17912009 intron CG6847 + chrX_4_17910001 chrX_17910001 RAL-774_125 2890 chrX 17965704 17965719 chrX 17965804 17965846 4 120 2.0 1.0 1.5 1.6 142 chrX 17965704 intron Sh - chrX 17965775 intron Sh - chrX 17965846 intron Sh - chrX_4_17965001 chrX_17965001 RAL-774_125 2891 chrX 17968858 17968908 chrX 17969027 17969076 7 168 3.5 3.0 3.2 1.7 218 chrX 17968858 intron Sh - chrX 17968967 intron Sh - chrX 17969076 intron Sh - chrX_7_17965001 chrX_17965001 RAL-774_125 2892 chrX 17972160 17972213 chrX 17972575 17972588 10 407 5.0 2.0 3.5 2.2 428 chrX 17972160 intron Sh - chrX 17972374 intron Sh - chrX 17972588 intron Sh - chrX_10_17970001 chrX_17970001 RAL-774_125 2893 chrX 18122784 18122836 chrX 18122900 18122962 9 123 5.0 2.0 3.5 2.0 178 chrX 18122784 5` UTR CR45606 + chrX 18122873 5` UTR CR45606 + chrX 18122962 intergenic CR45606 + chrX_9_18120001 chrX_18120001 RAL-774_125 2894 chrX 18126559 18126837 chrX 18126727 18126964 14 155 4.0 2.5 3.2 3.3 405 chrX 18126559 intron CG32553 - chrX 18126762 intron CG32553 - chrX 18126964 5` UTR CG32553 - chrX_14_18125001 chrX_18125001 RAL-774_125 2895 chrX 18429448 18429514 chrX 18434809 18434875 Transpac 11 5359 6.0 3.0 4.5 2.0 5427 chrX 18429448 intergenic not near genes chrX 18432162 intergenic not near genes chrX 18434875 intergenic not near genes chrX_11_18430001 chrX_18430001 RAL-774_125 2896 chrX 18486085 18486138 chrX 18486198 18486262 13 129 4.0 5.0 4.5 2.4 177 chrX 18486085 exon psh - chrX 18486174 intron psh - chrX 18486262 intron psh - chrX_13_18485001 chrX_18485001 RAL-774_125 2897 chrX 18490038 18490048 chrX 18490209 18490253 6 195 2.5 3.5 3.0 1.5 215 chrX 18490038 intergenic CG15046 - chrX 18490146 intergenic not near genes chrX 18490253 intergenic not near genes chrX_6_18490001 chrX_18490001 RAL-774_125 2898 chrX 18645006 18645046 chrX 18645141 18645194 10 144 4.5 5.0 4.8 1.7 188 chrX 18645006 intron Rip11 - chrX 18645100 intron Rip11 - chrX 18645194 intron Rip11 - chrX_10_18645001 chrX_18645001 RAL-774_125 2899 chrX 18698805 18698874 chrX 18698972 18699039 7 166 1.0 4.0 2.5 2.0 234 chrX 18698805 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699039 intergenic not near genes chrX_7_18695001 chrX_18695001 RAL-774_125 2900 chrX 18737128 18737180 chrX 18737260 18737295 15 128 2.5 5.5 4.0 3.0 167 chrX 18737128 intergenic not near genes chrX 18737212 intergenic not near genes chrX 18737295 intergenic not near genes chrX_15_18735001 chrX_18735001 RAL-774_125 2901 chrX 18774411 18774471 chrX 18774537 18774604 8 128 4.0 1.5 2.8 2.1 193 chrX 18774411 intergenic CCKLR-17D3 - chrX 18774508 intergenic CCKLR-17D3 - chrX 18774604 intergenic not near genes chrX_8_18770001 chrX_18770001 RAL-774_125 2902 chrX 18896470 18896542 chrX 18896631 18896703 7 159 2.0 4.0 3.0 1.8 233 chrX 18896470 3` UTR CG7349 + chrX 18896586 intergenic CG7349 + chrX 18896703 intergenic CG7349 + chrX_7_18895001 chrX_18895001 RAL-774_125 2903 chrX 18923661 18923668 chrX 18923787 18923793 4 125 1.5 7.0 4.2 0.8 132 chrX 18923661 intergenic not near genes chrX 18923727 intergenic not near genes chrX 18923793 intergenic not near genes chrX_4_18920001 chrX_18920001 RAL-774_125 2904 chrX 18924425 18924441 chrX 18924541 18924548 4 114 9.5 8.0 8.8 0.4 123 chrX 18924425 intergenic not near genes chrX 18924486 intergenic not near genes chrX 18924548 intergenic not near genes chrX_4_18920001 chrX_18920001 RAL-774_125 2905 chrX 18924449 18924474 chrX 18924538 18924570 6 104 7.0 8.0 7.5 0.7 121 chrX 18924449 intergenic not near genes chrX 18924510 intergenic not near genes chrX 18924570 intergenic not near genes chrX_6_18920001 chrX_18920001 RAL-774_125 2906 chrX 18947467 18947533 chrX 18947604 18947654 17 137 2.5 4.5 3.5 3.8 187 chrX 18947467 intron CG43759 + chrX 18947560 intron CG43759 + chrX 18947654 intron CG43759 + chrX_17_18945001 chrX_18945001 RAL-774_125 2907 chrX 18957044 18957090 chrX 18965741 18965798 roo 6 8709 2.0 4.0 3.0 1.5 8754 chrX 18957044 intron CG43759 + chrX 18961421 intron CG43759 + chrX 18965798 intron CG43759 + chrX_6_18960001 chrX_18960001 RAL-774_125 2908 chrX 18988303 18988549 chrX 18988511 18988678 6 172 0.0 0.0 0.0 6.0 375 chrX 18988303 intron CG43759 + chrX 18988490 intron CG43759 + chrX 18988678 intron CG43759 + chrX_6_18985001 chrX_18985001 RAL-774_125 2909 chrX 19060365 19060426 chrX 19065199 19065253 Doc 10 4832 4.5 6.0 5.2 1.6 4888 chrX 19060365 intron CG14190 + chrX 19062809 intron CG14190 + chrX 19065253 intron CG14190 + chrX_10_19060001 chrX_19060001 RAL-774_125 2910 chrX 19073659 19073693 chrX 19073791 19073830 6 136 6.5 9.0 7.8 0.7 171 chrX 19073659 intergenic not near genes chrX 19073744 intergenic not near genes chrX 19073830 intergenic not near genes chrX_6_19070001 chrX_19070001 RAL-774_125 2911 chrX 19098711 19098756 chrX 19098838 19098883 7 126 0.0 1.0 0.5 4.7 172 chrX 19098711 intergenic not near genes chrX 19098797 intergenic not near genes chrX 19098883 intergenic not near genes chrX_7_19095001 chrX_19095001 RAL-774_125 2912 chrX 19119653 19119693 chrX 19119789 19119823 6 134 3.0 0.0 1.5 2.4 170 chrX 19119653 intergenic not near genes chrX 19119738 intergenic not near genes chrX 19119823 intergenic not near genes chrX_6_19115001 chrX_19115001 RAL-774_125 2913 chrX 19125656 19125708 chrX 19125823 19125887 12 176 5.0 5.5 5.2 1.9 231 chrX 19125656 intron tgy - chrX 19125772 intron tgy - chrX 19125887 intron tgy - chrX_12_19125001 chrX_19125001 RAL-774_125 2914 chrX 19136514 19136580 chrX 19143484 19143490 412 10 6952 3.5 3.0 3.2 2.4 6976 chrX 19136514 intergenic not near genes chrX 19140002 intergenic not near genes chrX 19143490 3` UTR RhoGAP18B - chrX_10_19140001 chrX_19140001 RAL-774_125 2915 chrX 19212573 19212634 chrX 19212953 19212979 9 375 2.5 2.5 2.5 2.6 406 chrX 19212573 intergenic CG14195 - chrX 19212776 intergenic Mur18B + chrX 19212979 intergenic Mur18B + chrX_9_19210001 chrX_19210001 RAL-774_125 2916 chrX 19249629 19249648 chrX 19256354 19256380 5 6728 18.0 14.0 16.0 0.3 6751 chrX 19249629 intron Hs3st-B + chrX 19253004 exon rictor - chrX 19256380 exon rictor - chrX_5_19250001 chrX_19250001 RAL-774_125 2917 chrX 19320180 19320245 chrX 19320318 19320383 15 135 10.0 5.0 7.5 1.8 203 chrX 19320180 intron out - chrX 19320282 intron out - chrX 19320383 intron out - chrX_15_19320001 chrX_19320001 RAL-774_125 2918 chrX 19353160 19353209 chrX 19353321 19353375 8 158 1.5 0.5 1.0 4.0 215 chrX 19353160 intergenic kek5 + chrX 19353268 5` UTR kek5 + chrX 19353375 5` UTR kek5 + chrX_8_19350001 chrX_19350001 RAL-774_125 2919 chrX 19356960 19357020 chrX 19358451 19358529 NOF 10 1504 4.0 0.0 2.0 3.3 1569 chrX 19356960 intron kek5 + chrX 19357744 intron kek5 + chrX 19358529 intron kek5 + chrX_10_19355001 chrX_19355001 RAL-774_125 2920 chrX 19380117 19380178 chrX 19380408 19380469 pogo 10 288 6.0 1.5 3.8 2.1 352 chrX 19380117 intron kek5 + chrX 19380293 intron kek5 + chrX 19380469 intron kek5 + chrX_10_19380001 chrX_19380001 RAL-774_125 2921 chrX 19420866 19420908 chrX 19420992 19421020 8 123 2.0 2.0 2.0 2.7 154 chrX 19420866 intron kek5 + chrX 19420943 intron kek5 + chrX 19421020 intron kek5 + chrX_8_19420001 chrX_19420001 RAL-774_125 2922 chrX 19472100 19472152 chrX 19472705 19472750 jockey 8 610 1.5 7.0 4.2 1.5 650 chrX 19472100 intergenic kek5 + chrX 19472425 intergenic not near genes chrX 19472750 intergenic not near genes chrX_8_19470001 chrX_19470001 RAL-774_125 2923 chrX 19500528 19500744 chrX 19500655 19500881 13 131 2.0 2.0 2.0 4.3 353 chrX 19500528 intron,intron CG14200 +,Pfrx + chrX 19500704 intron,intron CG14200 +,Pfrx + chrX 19500881 intron,intron CG14200 +,Pfrx + chrX_13_19500001 chrX_19500001 RAL-774_125 2924 chrX 19560646 19560675 chrX 19560795 19560824 6 148 4.0 6.5 5.2 1.0 178 chrX 19560646 3` UTR Grip84 - chrX 19560735 3` UTR Grip84 - chrX 19560824 3` UTR Grip84 - chrX_6_19560001 chrX_19560001 RAL-774_125 2925 chrX 19593909 19593964 chrX 19594039 19594099 12 132 6.0 3.5 4.8 2.1 190 chrX 19593909 exon CG14205 + chrX 19594004 intron CG14205 + chrX 19594099 exon CG14205 + chrX_12_19590001 chrX_19590001 RAL-774_125 2926 chrX 19595692 19595742 chrX 19595831 19595881 11 139 2.0 0.0 1.0 5.5 189 chrX 19595692 intergenic CG14205 + chrX 19595786 intergenic CG14205 + chrX 19595881 intergenic CG14205 + chrX_11_19595001 chrX_19595001 RAL-774_125 2927 chrX 19710033 19710092 chrX 19711864 19711928 S-element 13 1830 4.0 2.5 3.2 3.1 1895 chrX 19710033 intron meso18E - chrX 19710980 intron meso18E - chrX 19711928 intron meso18E - chrX_13_19710001 chrX_19710001 RAL-774_125 2928 chrX 19756085 19756102 chrX 19756220 19756238 6 134 6.0 2.0 4.0 1.2 153 chrX 19756085 intron Pmp70 + chrX 19756162 intron Pmp70 + chrX 19756238 intron Pmp70 + chrX_6_19755001 chrX_19755001 RAL-774_125 2929 chrX 19769347 19769415 chrX 19769474 19769509 12 129 3.0 5.0 4.0 2.4 162 chrX 19769347 3` UTR vfl - chrX 19769428 3` UTR vfl - chrX 19769509 intron vfl - chrX_12_19765001 chrX_19765001 RAL-774_125 2930 chrX 19797306 19797339 chrX 19804668 19804702 Stalker4 4 7363 10.0 3.0 6.5 0.5 7396 chrX 19797306 intergenic not near genes chrX 19801004 intergenic not near genes chrX 19804702 intergenic not near genes chrX_4_19800001 chrX_19800001 RAL-774_125 2931 chrX 19881420 19881474 chrX 19881551 19881605 11 129 1.0 4.5 2.8 2.9 185 chrX 19881420 intron Hers + chrX 19881512 intron Hers + chrX 19881605 intron Hers + chrX_11_19880001 chrX_19880001 RAL-774_125 2932 chrX 19884081 19884101 chrX 19884177 19884224 4 108 2.5 6.0 4.2 0.8 143 chrX 19884081 intron Hers + chrX 19884152 intron Hers + chrX 19884224 intron Hers + chrX_4_19880001 chrX_19880001 RAL-774_125 2933 chrX 19971784 19971826 chrX 19971905 19971948 8 122 4.5 5.0 4.8 1.4 164 chrX 19971784 intergenic not near genes chrX 19971866 intergenic not near genes chrX 19971948 intergenic not near genes chrX_8_19970001 chrX_19970001 RAL-774_125 2934 chrX 19992368 19992410 chrX 19992494 19992514 4 118 5.5 6.5 6.0 0.6 146 chrX 19992368 intergenic not near genes chrX 19992441 intergenic not near genes chrX 19992514 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-774_125 2935 chrX 20125360 20125379 chrX 20125492 20125511 4 132 0.0 2.5 1.2 1.8 151 chrX 20125360 intergenic CG34331 + chrX 20125436 intergenic CG34331 + chrX 20125511 intergenic CG34331 + chrX_4_20125001 chrX_20125001 RAL-774_125 2936 chrX 20271455 20271492 chrX 20271597 20271634 10 141 8.0 0.0 4.0 2.0 179 chrX 20271455 intergenic not near genes chrX 20271544 intergenic not near genes chrX 20271634 intergenic not near genes chrX_10_20270001 chrX_20270001 RAL-774_125 2937 chrX 20279739 20279776 chrX 20279860 20279907 8 130 3.5 3.5 3.5 1.8 168 chrX 20279739 intergenic not near genes chrX 20279823 intergenic not near genes chrX 20279907 intergenic not near genes chrX_8_20275001 chrX_20275001 RAL-774_125 2938 chrX 20312849 20312910 chrX 20312977 20313038 11 126 5.0 3.0 4.0 2.2 189 chrX 20312849 intron CG1504 - chrX 20312944 intron CG1504 - chrX 20313038 intron CG1504 - chrX_11_20310001 chrX_20310001 RAL-774_125 2939 chrX 20320270 20320298 chrX 20320387 20320425 6 120 2.5 1.0 1.8 2.1 155 chrX 20320270 intron CG1504 - chrX 20320348 intron CG1504 - chrX 20320425 intron CG1504 - chrX_6_20320001 chrX_20320001 RAL-774_125 2940 chrX 20325915 20325965 chrX 20326503 20326559 13 591 2.5 3.5 3.0 3.2 644 chrX 20325915 intron CG1504 - chrX 20326237 intron CG1504 - chrX 20326559 intron CG1504 - chrX_13_20325001 chrX_20325001 RAL-774_125 2941 chrX 20374062 20374128 chrX 20374172 20374244 6 118 2.5 4.5 3.5 1.3 182 chrX 20374062 intergenic not near genes chrX 20374153 intergenic not near genes chrX 20374244 intergenic not near genes chrX_6_20370001 chrX_20370001 RAL-774_125 2942 chrX 20443175 20443202 chrX 20443298 20443328 5 124 3.0 4.5 3.8 1.0 153 chrX 20443175 exon CG1695 + chrX 20443252 intron CG1695 + chrX 20443328 intron CG1695 + chrX_5_20440001 chrX_20440001 RAL-774_125 2943 chrX 20448390 20448437 chrX 20448520 20448571 7 132 5.5 0.5 3.0 1.8 181 chrX 20448390 intergenic not near genes chrX 20448480 intergenic not near genes chrX 20448571 intergenic not near genes chrX_7_20445001 chrX_20445001 RAL-774_125 2944 chrX 20467978 20468016 chrX 20468117 20468133 6 133 4.0 0.0 2.0 2.0 155 chrX 20467978 intron GstT3 + chrX 20468056 intron GstT3 + chrX 20468133 intron GstT3 + chrX_6_20465001 chrX_20465001 RAL-774_125 2945 chrX 20504086 20504148 chrX 20505657 20505705 transib2 7 1565 5.5 4.0 4.8 1.2 1619 chrX 20504086 intron RhoGAP19D - chrX 20504896 intron RhoGAP19D - chrX 20505705 intron RhoGAP19D - chrX_7_20500001 chrX_20500001 RAL-774_125 2946 chrX 20518739 20518797 chrX 20518867 20518926 10 126 2.5 4.0 3.2 2.4 187 chrX 20518739 intron Tak1 - chrX 20518832 intron Tak1 - chrX 20518926 intron Tak1 - chrX_10_20515001 chrX_20515001 RAL-774_125 2947 chrX 20528568 20528621 chrX 20528962 20529019 10 396 3.0 7.5 5.2 1.6 451 chrX 20528568 intergenic not near genes chrX 20528794 intergenic not near genes chrX 20529019 intergenic not near genes chrX_10_20525001 chrX_20525001 RAL-774_125 2948 chrX 20531741 20531781 chrX 20531890 20531930 6 148 0.0 6.0 3.0 1.5 189 chrX 20531741 intergenic not near genes chrX 20531836 intergenic not near genes chrX 20531930 intergenic not near genes chrX_6_20530001 chrX_20530001 RAL-774_125 2949 chrX 20546540 20546557 chrX 20546741 20546758 5 204 3.0 2.5 2.8 1.3 218 chrX 20546540 intron RunxB + chrX 20546649 intron RunxB + chrX 20546758 intron RunxB + chrX_5_20545001 chrX_20545001 RAL-774_125 2950 chrX 20560219 20560270 chrX 20560369 20560412 6 148 2.5 2.0 2.2 1.9 193 chrX 20560219 intron RunxB + chrX 20560316 intron RunxB + chrX 20560412 intron RunxB + chrX_6_20560001 chrX_20560001 RAL-774_125 2951 chrX 20575116 20575161 chrX 20575233 20575289 12 124 3.5 1.5 2.5 3.4 173 chrX 20575116 intergenic CG42580 + chrX 20575202 intergenic not near genes chrX 20575289 intergenic not near genes chrX_12_20575001 chrX_20575001 RAL-774_125 2952 chrX 20635389 20635445 chrX 20635605 20635661 12 214 1.5 4.0 2.8 3.2 272 chrX 20635389 intergenic not near genes chrX 20635525 intergenic not near genes chrX 20635661 intergenic not near genes chrX_12_20635001 chrX_20635001 RAL-774_125 2953 chrX 20708353 20708380 chrX 20708468 20708506 4 119 4.0 3.5 3.8 0.8 153 chrX 20708353 intergenic not near genes chrX 20708430 intergenic not near genes chrX 20708506 intergenic not near genes chrX_4_20705001 chrX_20705001 RAL-774_125 2954 chrX 20710371 20710414 chrX 20710497 20710542 4 126 2.5 0.0 1.2 1.8 171 chrX 20710371 intergenic not near genes chrX 20710456 intergenic not near genes chrX 20710542 intergenic not near genes chrX_4_20710001 chrX_20710001 RAL-774_125 2955 chrX 20713869 20713916 chrX 20714002 20714049 4 132 1.0 3.0 2.0 1.3 180 chrX 20713869 intergenic not near genes chrX 20713959 intergenic not near genes chrX 20714049 intergenic not near genes chrX_4_20710001 chrX_20710001 RAL-774_125 2956 chrX 20741541 20741558 chrX 20741666 20741684 5 126 6.5 0.0 3.2 1.2 143 chrX 20741541 intergenic not near genes chrX 20741612 intergenic not near genes chrX 20741684 intergenic not near genes chrX_5_20740001 chrX_20740001 RAL-774_125 2957 chrX 20814098 20814136 chrX 20814213 20814264 4 127 5.0 4.0 4.5 0.7 166 chrX 20814098 intron shakB - chrX 20814181 intron shakB - chrX 20814264 intron shakB - chrX_4_20810001 chrX_20810001 RAL-774_125 2958 chrX 20824048 20824092 chrX 20824202 20824246 7 151 2.0 3.5 2.8 1.8 198 chrX 20824048 intron,intron shakB -,CG15450 + chrX 20824147 intron,intron shakB -,CG15450 + chrX 20824246 intron,intron shakB -,CG15450 + chrX_7_20820001 chrX_20820001 RAL-774_125 2959 chrX 20940684 20940725 chrX 20942197 20942232 hobo 9 1513 3.5 2.0 2.8 2.4 1548 chrX 20940684 intergenic not near genes chrX 20941458 intergenic not near genes chrX 20942232 intergenic not near genes chrX_9_20940001 chrX_20940001 RAL-774_125 2960 chrX 20948210 20948280 chrX 20948349 20948419 5 138 0.0 1.0 0.5 3.3 209 chrX 20948210 intergenic not near genes chrX 20948314 intergenic not near genes chrX 20948419 intergenic not near genes chrX_5_20945001 chrX_20945001 RAL-774_125 2961 chrX 20980984 20981053 chrX 20981137 20981206 7 153 3.5 3.0 3.2 1.7 222 chrX 20980984 intergenic not near genes chrX 20981095 intergenic not near genes chrX 20981206 intergenic not near genes chrX_7_20980001 chrX_20980001 RAL-774_125 2962 chrX 21029788 21029802 chrX 21029963 21029978 4 183 1.0 1.5 1.2 1.8 190 chrX 21029788 3` UTR CG1529 - chrX 21029883 3` UTR CG1529 - chrX 21029978 3` UTR CG1529 - chrX_4_21025001 chrX_21025001 RAL-774_125 2963 chrX 21058627 21058673 chrX 21058769 21058821 6 146 0.5 5.0 2.8 1.6 194 chrX 21058627 intron bves + chrX 21058724 intron bves + chrX 21058821 intron bves + chrX_6_21055001 chrX_21055001 RAL-774_125 2964 chrX 21061830 21061894 chrX 21062364 21062421 roo 4 532 2.5 3.0 2.8 1.1 591 chrX 21061830 intron bves + chrX 21062126 intron bves + chrX 21062421 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 RAL-774_125 2965 chrX 21076286 21076330 chrX 21076415 21076459 7 125 3.5 0.0 1.8 2.5 173 chrX 21076286 intron bves + chrX 21076372 intron bves + chrX 21076459 intron bves + chrX_7_21075001 chrX_21075001 RAL-774_125 2966 chrX 21086094 21086153 chrX 21087173 21087202 jockey 8 1074 3.5 7.5 5.5 1.2 1108 chrX 21086094 intergenic not near genes chrX 21086648 intergenic not near genes chrX 21087202 intergenic not near genes chrX_8_21085001 chrX_21085001 RAL-774_125 2967 chrX 21088012 21088041 chrX 21088193 21088223 5 179 5.0 2.5 3.8 1.0 211 chrX 21088012 intergenic not near genes chrX 21088118 intergenic not near genes chrX 21088223 intergenic not near genes chrX_5_21085001 chrX_21085001 RAL-774_125 2968 chrX 21222024 21222101 chrX 21222153 21222220 7 131 2.0 0.5 1.2 3.2 196 chrX 21222024 intron CG32521 - chrX 21222122 intron CG32521 - chrX 21222220 intron CG32521 - chrX_7_21220001 chrX_21220001 RAL-774_125 2969 chrX 21264687 21264753 chrX 21264807 21264879 13 124 3.0 4.5 3.8 2.7 192 chrX 21264687 intron CG32521 - chrX 21264783 intron CG32521 - chrX 21264879 intron CG32521 - chrX_13_21260001 chrX_21260001 RAL-774_125 2970 chrX 21275128 21275185 chrX 21275256 21275313 15 126 3.0 3.0 3.0 3.8 185 chrX 21275128 intron CG32521 - chrX 21275220 intron CG32521 - chrX 21275313 intron CG32521 - chrX_15_21275001 chrX_21275001 RAL-774_125 2971 chrX 21308832 21308866 chrX 21308978 21309042 6 170 2.0 0.0 1.0 3.0 210 chrX 21308832 exon CG1801 - chrX 21308937 intron CG1801 - chrX 21309042 intron CG1801 - chrX_6_21305001 chrX_21305001 RAL-774_125 2972 chrX 21328079 21328147 chrX 21328240 21328295 8 158 2.0 3.5 2.8 2.1 216 chrX 21328079 3` UTR CG1486 + chrX 21328187 intergenic CG1486 +,tty - chrX 21328295 intergenic CG1486 +,tty - chrX_8_21325001 chrX_21325001 RAL-774_125 2973 chrX 21379019 21379068 chrX 21379135 21379199 10 127 2.0 3.5 2.8 2.6 180 chrX 21379019 intron slgA + chrX 21379109 intron slgA + chrX 21379199 intron slgA + chrX_10_21375001 chrX_21375001 RAL-774_125 2974 chrX 21419684 21419719 chrX 21419798 21419840 5 130 8.5 3.0 5.8 0.7 156 chrX 21419684 intergenic not near genes chrX 21419762 intergenic not near genes chrX 21419840 intergenic not near genes chrX_5_21415001 chrX_21415001 RAL-774_125 2975 chrX 21455175 21455245 chrX 21455399 21455482 6 233 3.0 0.5 1.8 2.1 307 chrX 21455175 intron CG42343 - chrX 21455328 intron CG42343 - chrX 21455482 intron CG42343 - chrX_6_21455001 chrX_21455001 RAL-774_125 2976 chrX 21458639 21458725 chrX 21464125 21464211 Ivk 6 5485 3.5 0.5 2.0 2.0 5572 chrX 21458639 intergenic not near genes chrX 21461425 intergenic not near genes chrX 21464211 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-774_125 2977 chrX 21516953 21517014 chrX 21517073 21517143 11 121 8.0 2.5 5.2 1.8 190 chrX 21516953 intron CR45082 - chrX 21517048 intron CR45082 - chrX 21517143 intron CR45082 - chrX_11_21515001 chrX_21515001 RAL-774_125 2978 chrX 21576400 21576447 chrX 21576757 21576819 10 370 4.0 4.5 4.2 1.9 419 chrX 21576400 intergenic not near genes chrX 21576610 intergenic not near genes chrX 21576819 intergenic not near genes chrX_10_21575001 chrX_21575001 RAL-774_125 2979 chrX 22448237 22448295 chrX 22448421 22448477 5 185 0.0 4.5 2.2 1.6 240 chrX 22448237 intron CG14615 - chrX 22448357 intron CG14615 - chrX 22448477 intron CG14615 - chrX_5_22445001 chrX_22445001 RAL-774_125 2980 chrX 22660540 22660602 chrX 22660659 22660736 4 128 2.5 2.5 2.5 1.1 196 chrX 22660540 intron CR44997 + chrX 22660638 intron CR44997 + chrX 22660736 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-774_125 2981 chrX 22697454 22697512 chrX 22701801 22701859 Juan 14 4343 5.0 6.5 5.8 2.1 4405 chrX 22697454 intron CR44997 + chrX 22699656 intron CR44997 + chrX 22701859 intron CR44997 + chrX_14_22695001 chrX_22695001 RAL-774_125 2982 chrX 22771471 22771529 chrX 22774812 22774860 297 11 3337 1.5 3.0 2.2 3.4 3389 chrX 22771471 intron CR44997 + chrX 22773166 intron CR44997 + chrX 22774860 intron CR44997 + chrX_11_22770001 chrX_22770001 RAL-774_125 2983 chrX 22798731 22798787 chrX 22798898 22798954 8 163 3.0 2.0 2.5 2.3 223 chrX 22798731 intergenic not near genes chrX 22798842 intergenic not near genes chrX 22798954 intergenic not near genes chrX_8_22795001 chrX_22795001 RAL-774_125 2984 chrX 22811961 22811999 chrX 22816784 22816809 F-element 8 4820 3.5 4.0 3.8 1.7 4848 chrX 22811961 intergenic CG12446 - chrX 22814385 intergenic not near genes chrX 22816809 intergenic not near genes chrX_8_22810001 chrX_22810001 RAL-774_125 2985 chrX 22820947 22820987 chrX 22821178 22821225 5 237 2.0 2.0 2.0 1.7 278 chrX 22820947 intergenic not near genes chrX 22821086 intergenic not near genes chrX 22821225 intergenic not near genes chrX_5_22820001 chrX_22820001 RAL-774_125 2986 chrX 22824229 22824406 chrX 22824399 22824588 10 180 0.0 0.0 0.0 10.0 359 chrX 22824229 intergenic fog - chrX 22824408 3` UTR fog - chrX 22824588 3` UTR fog - chrX_10_22820001 chrX_22820001 RAL-774_125 2987 chrX 22844495 22844519 chrX 22844632 22844656 4 137 6.0 2.0 4.0 0.8 161 chrX 22844495 intron,intron fog -,CG42346 + chrX 22844576 intron,intron fog -,CG42346 + chrX 22844656 intron,intron fog -,CG42346 + chrX_4_22840001 chrX_22840001 RAL-774_125 2988 chrX 22869149 22869165 chrX 22869261 22869273 5 114 1.5 2.0 1.8 1.8 124 chrX 22869149 intron CG42346 + chrX 22869211 intron CG42346 + chrX 22869273 intron CG42346 + chrX_5_22865001 chrX_22865001 RAL-774_125 2989 chrX 22987080 22987121 chrX 22989789 22989824 Burdock 7 2706 3.5 3.0 3.2 1.7 2744 chrX 22987080 intron,intron stnA -,stnB - chrX 22988452 intron,intron stnA -,stnB - chrX 22989824 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RAL-774_125 2990 chrX 22992352 22992423 chrX 22992533 22992604 7 178 5.0 3.5 4.2 1.3 252 chrX 22992352 intron,intron stnA -,stnB - chrX 22992478 intron,intron stnA -,stnB - chrX 22992604 3` UTR,exon stnA -,stnB - chrX_7_22990001 chrX_22990001 RAL-774_125 2991 chrX 22996276 22996325 chrX 23003560 23003609 roo 14 7282 2.0 2.5 2.2 4.4 7333 chrX 22996276 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003609 intron,intron stnA -,stnB - chrX_14_22995001 chrX_22995001 RAL-774_125 2992 chrY 1445412 1445436 chrY 1447400 1447416 4 1981 10.5 12.5 11.5 0.3 2004 chrY 1445412 intergenic not near genes chrY 1446414 intergenic not near genes chrY 1447416 intergenic not near genes chrY_4_1445001 chrY_1445001 RAL-774_125 2993 chrY 3664554 3664600 chrY 3664705 3664728 4 146 1.5 0.5 1.0 2.0 174 chrY 3664554 exon CG40948 + chrY 3664641 intergenic CG40948 + chrY 3664728 intergenic CG40948 + chrY_4_3660001 chrY_3660001 RAL-774_125