SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47460 47466 chr2L 52565 52571 jockey 4 5104 14.0 10.5 12.2 0.3 5111 chr2L 47460 intron Cda5 - chr2L 50016 intron Cda5 - chr2L 52571 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-757 2 chr2L 47473 47491 chr2L 52561 52586 jockey 4 5098 10.5 7.5 9.0 0.4 5113 chr2L 47473 intron Cda5 - chr2L 50030 intron Cda5 - chr2L 52586 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-757 3 chr2L 314286 314315 chr2L 314372 314401 10 79 7.0 3.0 5.0 1.7 115 chr2L 314286 intron Plc21C + chr2L 314344 intron Plc21C + chr2L 314401 intron Plc21C + chr2L_10_310001 chr2L_310001 RAL-757 4 chr2L 318289 318314 chr2L 318614 318619 8 320 5.5 3.0 4.2 1.5 330 chr2L 318289 intron Plc21C + chr2L 318454 intron,exon Plc21C +,CG11912 - chr2L 318619 intron,exon Plc21C +,CG11912 - chr2L_8_315001 chr2L_315001 RAL-757 5 chr2L 347886 347919 chr2L 355386 355419 blood 13 7493 7.5 6.0 6.8 1.7 7533 chr2L 347886 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355419 3` UTR Plc21C + chr2L_13_350001 chr2L_350001 RAL-757 6 chr2L 371445 371456 chr2L 371524 371535 7 79 3.0 5.0 4.0 1.4 90 chr2L 371445 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371535 intergenic not near genes chr2L_7_370001 chr2L_370001 RAL-757 7 chr2L 563950 563973 chr2L 564030 564051 11 77 4.5 10.0 7.2 1.3 101 chr2L 563950 intergenic CG11835 -,CG2794 + chr2L 564000 intergenic CG2794 +,CG11835 - chr2L 564051 intergenic CG2794 +,CG11835 - chr2L_11_560001 chr2L_560001 RAL-757 8 chr2L 666281 666290 chr2L 666356 666366 4 76 3.0 0.5 1.8 1.4 85 chr2L 666281 intron ds - chr2L 666324 intron ds - chr2L 666366 intron ds - chr2L_4_665001 chr2L_665001 RAL-757 9 chr2L 666293 666308 chr2L 666354 666384 6 71 0.5 0.5 0.5 4.0 91 chr2L 666293 intron ds - chr2L 666338 intron ds - chr2L 666384 intron ds - chr2L_6_665001 chr2L_665001 RAL-757 10 chr2L 686924 686948 chr2L 695964 695988 roo 4 9038 1.0 6.0 3.5 0.9 9064 chr2L 686924 intron ds - chr2L 691456 intron ds - chr2L 695988 intron ds - chr2L_4_690001 chr2L_690001 RAL-757 11 chr2L 736878 736902 chr2L 736983 737007 16 103 4.0 6.0 5.0 2.7 129 chr2L 736878 intergenic Eaat2 - chr2L 736942 intergenic Eaat2 - chr2L 737007 intergenic Eaat2 - chr2L_16_735001 chr2L_735001 RAL-757 12 chr2L 763595 763625 chr2L 763671 763701 5 75 2.0 3.0 2.5 1.4 106 chr2L 763595 intergenic not near genes chr2L 763648 intergenic not near genes chr2L 763701 intergenic not near genes chr2L_5_760001 chr2L_760001 RAL-757 13 chr2L 849477 849481 chr2L 849563 849572 4 88 7.0 6.0 6.5 0.5 95 chr2L 849477 intron drongo - chr2L 849524 intron drongo - chr2L 849572 intron drongo - chr2L_4_845001 chr2L_845001 RAL-757 14 chr2L 877844 877872 chr2L 877924 877926 12 76 4.5 3.0 3.8 2.5 82 chr2L 877844 3` UTR,exon CG15824 -,ninaA + chr2L 877885 3` UTR,intron CG15824 -,ninaA + chr2L 877926 3` UTR,intron CG15824 -,ninaA + chr2L_12_875001 chr2L_875001 RAL-757 15 chr2L 922472 922496 chr2L 922552 922577 7 77 5.5 5.5 5.5 1.1 105 chr2L 922472 intergenic CG4341 + chr2L 922524 intergenic CG4341 + chr2L 922577 intergenic CG4341 + chr2L_7_920001 chr2L_920001 RAL-757 16 chr2L 955988 955994 chr2L 956068 956090 5 92 0.0 3.0 1.5 2.0 102 chr2L 955988 intron CG4341 + chr2L 956039 intron CG4341 + chr2L 956090 intron CG4341 + chr2L_5_955001 chr2L_955001 RAL-757 17 chr2L 964554 964571 chr2L 964638 964655 6 83 6.5 5.0 5.8 0.9 101 chr2L 964554 intergenic not near genes chr2L 964604 intergenic not near genes chr2L 964655 intergenic not near genes chr2L_6_960001 chr2L_960001 RAL-757 18 chr2L 976877 976909 chr2L 984513 984545 roo 15 7635 6.0 9.0 7.5 1.8 7668 chr2L 976877 intergenic not near genes chr2L 980711 intergenic not near genes chr2L 984545 intergenic not near genes chr2L_15_980001 chr2L_980001 RAL-757 19 chr2L 1042618 1042625 chr2L 1042695 1042702 6 76 10.5 0.0 5.2 1.0 84 chr2L 1042618 intron IA-2 - chr2L 1042660 intron IA-2 - chr2L 1042702 intron IA-2 - chr2L_6_1040001 chr2L_1040001 RAL-757 20 chr2L 1126679 1126695 chr2L 1126755 1126755 7 71 7.0 3.0 5.0 1.2 76 chr2L 1126679 intron Pino - chr2L 1126717 intron Pino - chr2L 1126755 intron Pino - chr2L_7_1125001 chr2L_1125001 RAL-757 21 chr2L 1156865 1156875 chr2L 1156965 1156970 6 98 9.0 2.0 5.5 0.9 105 chr2L 1156865 intron capt - chr2L 1156918 intron capt - chr2L 1156970 intron capt - chr2L_6_1155001 chr2L_1155001 RAL-757 22 chr2L 1164245 1164282 chr2L 1164331 1164368 16 80 4.0 5.0 4.5 2.9 123 chr2L 1164245 intergenic IntS14 +,CG5080 - chr2L 1164306 intergenic IntS14 +,CG5080 - chr2L 1164368 intergenic IntS14 +,CG5080 - chr2L_16_1160001 chr2L_1160001 RAL-757 23 chr2L 1220134 1220162 chr2L 1227600 1227628 blood 7 7465 7.0 11.0 9.0 0.7 7494 chr2L 1220134 intron CG42329 + chr2L 1223881 intron CG42329 + chr2L 1227628 intron CG42329 + chr2L_7_1220001 chr2L_1220001 RAL-757 24 chr2L 1277429 1277448 chr2L 1277515 1277534 9 82 1.5 7.0 4.2 1.7 105 chr2L 1277429 intron robo3 + chr2L 1277482 intron robo3 + chr2L 1277534 intron robo3 + chr2L_9_1275001 chr2L_1275001 RAL-757 25 chr2L 1277450 1277457 chr2L 1277514 1277543 4 79 1.0 7.0 4.0 0.8 93 chr2L 1277450 intron robo3 + chr2L 1277496 intron robo3 + chr2L 1277543 intron robo3 + chr2L_4_1275001 chr2L_1275001 RAL-757 26 chr2L 1318846 1318869 chr2L 1318981 1319002 10 133 3.5 5.5 4.5 1.8 156 chr2L 1318846 intergenic not near genes chr2L 1318924 intergenic not near genes chr2L 1319002 intergenic not near genes chr2L_10_1315001 chr2L_1315001 RAL-757 27 chr2L 1482007 1482035 chr2L 1482087 1482114 17 78 6.0 7.5 6.8 2.2 107 chr2L 1482007 intergenic not near genes chr2L 1482060 intergenic not near genes chr2L 1482114 intergenic not near genes chr2L_17_1480001 chr2L_1480001 RAL-757 28 chr2L 1568828 1568833 chr2L 1568925 1568932 4 98 13.5 4.0 8.8 0.4 104 chr2L 1568828 intron haf + chr2L 1568880 intron haf + chr2L 1568932 intron haf + chr2L_4_1565001 chr2L_1565001 RAL-757 29 chr2L 1568837 1568854 chr2L 1568921 1568953 12 91 7.0 3.0 5.0 2.0 116 chr2L 1568837 intron haf + chr2L 1568895 intron haf + chr2L 1568953 intron haf + chr2L_12_1565001 chr2L_1565001 RAL-757 30 chr2L 1570683 1570715 chr2L 1573555 1573586 F-element 15 2872 4.0 6.0 5.0 2.5 2903 chr2L 1570683 intron haf + chr2L 1572134 intron haf + chr2L 1573586 intron haf + chr2L_15_1570001 chr2L_1570001 RAL-757 31 chr2L 1615385 1615414 chr2L 1615466 1615491 9 79 0.0 3.0 1.5 3.6 106 chr2L 1615385 intergenic not near genes chr2L 1615438 intergenic not near genes chr2L 1615491 intergenic not near genes chr2L_9_1615001 chr2L_1615001 RAL-757 32 chr2L 1620276 1620294 chr2L 1620352 1620370 11 75 0.5 8.5 4.5 2.0 94 chr2L 1620276 3` UTR CR44603 - chr2L 1620323 3` UTR CR44603 - chr2L 1620370 3` UTR CR44603 - chr2L_11_1620001 chr2L_1620001 RAL-757 33 chr2L 1635396 1635432 chr2L 1635532 1635565 13 133 0.0 8.0 4.0 2.6 169 chr2L 1635396 intergenic not near genes chr2L 1635480 intergenic not near genes chr2L 1635565 intergenic not near genes chr2L_13_1635001 chr2L_1635001 RAL-757 34 chr2L 1640323 1640355 chr2L 1640401 1640433 14 77 5.0 4.5 4.8 2.4 110 chr2L 1640323 intergenic not near genes chr2L 1640378 intergenic not near genes chr2L 1640433 intergenic not near genes chr2L_14_1640001 chr2L_1640001 RAL-757 35 chr2L 1678976 1679007 chr2L 1686441 1686467 blood 12 7463 4.0 8.5 6.2 1.7 7491 chr2L 1678976 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686467 intron chinmo + chr2L_12_1680001 chr2L_1680001 RAL-757 36 chr2L 1711354 1711372 chr2L 1711678 1711690 mdg3 6 323 6.0 4.5 5.2 1.0 336 chr2L 1711354 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711522 3` UTR frtz - chr2L 1711690 3` UTR frtz - chr2L_6_1710001 chr2L_1710001 RAL-757 37 chr2L 1721825 1721852 chr2L 1721906 1721919 8 78 0.5 1.0 0.8 4.4 94 chr2L 1721825 intron Rim2 - chr2L 1721872 intron Rim2 - chr2L 1721919 intron Rim2 - chr2L_8_1720001 chr2L_1720001 RAL-757 38 chr2L 1883417 1883445 chr2L 1883999 1884011 7 577 2.0 3.5 2.8 1.8 594 chr2L 1883417 intron CG15358 - chr2L 1883714 intron CG15358 - chr2L 1884011 exon CG15358 - chr2L_7_1880001 chr2L_1880001 RAL-757 39 chr2L 1925489 1925500 chr2L 1925566 1925576 8 76 4.5 3.5 4.0 1.6 87 chr2L 1925489 intron CG7337 + chr2L 1925532 intron CG7337 + chr2L 1925576 intron CG7337 + chr2L_8_1925001 chr2L_1925001 RAL-757 40 chr2L 2001786 2001817 chr2L 2001859 2001895 8 74 2.5 5.5 4.0 1.6 109 chr2L 2001786 intron,5` UTR CG33543 -,CR43464 + chr2L 2001840 intron,5` UTR CG33543 -,CR43464 + chr2L 2001895 intron,5` UTR CG33543 -,CR43464 + chr2L_8_2000001 chr2L_2000001 RAL-757 41 chr2L 2007856 2007868 chr2L 2007958 2007976 6 107 3.5 1.0 2.2 1.9 120 chr2L 2007856 intergenic CR45712 + chr2L 2007916 intergenic CR45712 +,Nplp4 + chr2L 2007976 intergenic CR45712 +,Nplp4 + chr2L_6_2005001 chr2L_2005001 RAL-757 42 chr2L 2053963 2053979 chr2L 2054098 2054110 5 134 2.5 2.5 2.5 1.4 147 chr2L 2053963 intergenic not near genes chr2L 2054036 intergenic not near genes chr2L 2054110 intergenic Or22c + chr2L_5_2050001 chr2L_2050001 RAL-757 43 chr2L 2100379 2100404 chr2L 2109527 2109549 roo 12 9148 8.5 2.0 5.2 1.9 9170 chr2L 2100379 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109549 intron dpr3 - chr2L_12_2100001 chr2L_2100001 RAL-757 44 chr2L 2125512 2125539 chr2L 2125854 2125889 22 346 10.0 44.0 27.0 0.8 377 chr2L 2125512 intergenic not near genes chr2L 2125700 intergenic not near genes chr2L 2125889 intergenic not near genes chr2L_22_2125001 chr2L_2125001 RAL-757 45 chr2L 2174084 2174113 chr2L 2174206 2174238 23 124 9.5 5.0 7.2 2.8 154 chr2L 2174084 intron aop - chr2L 2174161 intron aop - chr2L 2174238 intron aop - chr2L_23_2170001 chr2L_2170001 RAL-757 46 chr2L 2190119 2190124 chr2L 2190205 2190210 5 85 19.0 8.5 13.8 0.3 91 chr2L 2190119 3` UTR CG10874 - chr2L 2190164 3` UTR CG10874 - chr2L 2190210 3` UTR,5` UTR CG10874 -,CR44065 + chr2L_5_2190001 chr2L_2190001 RAL-757 47 chr2L 2190126 2190145 chr2L 2190204 2190215 4 78 10.5 8.0 9.2 0.4 89 chr2L 2190126 3` UTR CG10874 - chr2L 2190170 3` UTR CG10874 - chr2L 2190215 3` UTR,5` UTR CG10874 -,CR44065 + chr2L_4_2190001 chr2L_2190001 RAL-757 48 chr2L 2205950 2205953 chr2L 2208775 2208778 4 2825 26.5 8.5 17.5 0.2 2828 chr2L 2205950 exon CG31668 - chr2L 2207364 exon CG33124 - chr2L 2208778 intron CG33124 - chr2L_4_2205001 chr2L_2205001 RAL-757 49 chr2L 2302716 2302746 chr2L 2302814 2302830 11 94 8.5 1.5 5.0 1.8 114 chr2L 2302716 intergenic not near genes chr2L 2302773 intergenic not near genes chr2L 2302830 intergenic not near genes chr2L_11_2300001 chr2L_2300001 RAL-757 50 chr2L 2317127 2317132 chr2L 2317298 2317303 4 171 26.5 25.5 26.0 0.1 176 chr2L 2317127 intron,intron CG9967 -,eys + chr2L 2317215 intron,intron CG9967 -,eys + chr2L 2317303 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-757 51 chr2L 2372365 2372404 chr2L 2372451 2372484 8 80 0.0 1.5 0.8 4.4 119 chr2L 2372365 intergenic CG3609 - chr2L 2372424 intergenic CG3609 - chr2L 2372484 3` UTR CG3609 - chr2L_8_2370001 chr2L_2370001 RAL-757 52 chr2L 2475671 2475701 chr2L 2475756 2475783 5 84 3.0 2.0 2.5 1.4 112 chr2L 2475671 intergenic not near genes chr2L 2475727 intergenic not near genes chr2L 2475783 intergenic not near genes chr2L_5_2475001 chr2L_2475001 RAL-757 53 chr2L 2503731 2503742 chr2L 2504495 2504499 6 765 7.5 9.5 8.5 0.6 768 chr2L 2503731 intergenic not near genes chr2L 2504115 intergenic not near genes chr2L 2504499 intergenic not near genes chr2L_6_2500001 chr2L_2500001 RAL-757 54 chr2L 2557209 2557215 chr2L 2557285 2557291 4 76 2.0 7.0 4.5 0.7 82 chr2L 2557209 intergenic not near genes chr2L 2557250 intergenic not near genes chr2L 2557291 intergenic not near genes chr2L_4_2555001 chr2L_2555001 RAL-757 55 chr2L 2618035 2618067 chr2L 2618114 2618146 18 76 2.5 8.0 5.2 2.9 111 chr2L 2618035 intergenic not near genes chr2L 2618090 intergenic not near genes chr2L 2618146 intergenic not near genes chr2L_18_2615001 chr2L_2615001 RAL-757 56 chr2L 2660858 2660875 chr2L 2660983 2661000 5 125 3.5 9.5 6.5 0.7 142 chr2L 2660858 intergenic not near genes chr2L 2660929 intergenic not near genes chr2L 2661000 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-757 57 chr2L 2661197 2661234 chr2L 2663033 2663066 I-element 5 1827 2.0 4.0 3.0 1.2 1869 chr2L 2661197 intergenic not near genes chr2L 2662132 intergenic not near genes chr2L 2663066 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-757 58 chr2L 2698878 2698894 chr2L 2698965 2698981 8 87 2.0 4.5 3.2 1.9 103 chr2L 2698878 intron CG31690 + chr2L 2698930 intron CG31690 + chr2L 2698981 intron CG31690 + chr2L_8_2695001 chr2L_2695001 RAL-757 59 chr2L 2724412 2724428 chr2L 2724488 2724504 9 75 1.5 7.5 4.5 1.6 92 chr2L 2724412 intergenic not near genes chr2L 2724458 intergenic not near genes chr2L 2724504 intergenic not near genes chr2L_9_2720001 chr2L_2720001 RAL-757 60 chr2L 2724430 2724440 chr2L 2724486 2724516 10 68 1.5 7.0 4.2 1.9 86 chr2L 2724430 intergenic not near genes chr2L 2724473 intergenic not near genes chr2L 2724516 intergenic not near genes chr2L_10_2720001 chr2L_2720001 RAL-757 61 chr2L 2772615 2772630 chr2L 2779195 2779209 297 6 6580 2.5 9.5 6.0 0.9 6594 chr2L 2772615 3` UTR Syt1 - chr2L 2775912 intron Syt1 - chr2L 2779209 3` UTR Syt1 - chr2L_6_2775001 chr2L_2775001 RAL-757 62 chr2L 2873243 2873271 chr2L 2873600 2873629 15 353 6.5 5.0 5.8 2.2 386 chr2L 2873243 intron CG31694 - chr2L 2873436 intron CG31694 - chr2L 2873629 intron CG31694 - chr2L_15_2870001 chr2L_2870001 RAL-757 63 chr2L 2895686 2895718 chr2L 2895772 2895804 16 85 5.5 1.0 3.2 3.8 118 chr2L 2895686 intron lilli + chr2L 2895745 intron lilli + chr2L 2895804 intron lilli + chr2L_16_2895001 chr2L_2895001 RAL-757 64 chr2L 2925818 2925842 chr2L 2925912 2925936 9 91 7.5 8.0 7.8 1.0 118 chr2L 2925818 intron lilli + chr2L 2925877 intron lilli + chr2L 2925936 intron lilli + chr2L_9_2925001 chr2L_2925001 RAL-757 65 chr2L 2937422 2937428 chr2L 2937499 2937505 6 76 13.0 5.0 9.0 0.6 83 chr2L 2937422 intron lilli + chr2L 2937464 intron lilli + chr2L 2937505 intron lilli + chr2L_6_2935001 chr2L_2935001 RAL-757 66 chr2L 2937429 2937451 chr2L 2937496 2937528 10 75 6.5 4.5 5.5 1.5 99 chr2L 2937429 intron lilli + chr2L 2937478 intron lilli + chr2L 2937528 intron lilli + chr2L_10_2935001 chr2L_2935001 RAL-757 67 chr2L 3073030 3073062 chr2L 3078233 3078265 copia 16 5199 4.0 2.0 3.0 4.0 5235 chr2L 3073030 intron toc - chr2L 3075648 intron toc - chr2L 3078265 intron toc - chr2L_16_3075001 chr2L_3075001 RAL-757 68 chr2L 3108867 3108898 chr2L 3108944 3108975 13 73 2.5 3.5 3.0 3.2 108 chr2L 3108867 intron toc - chr2L 3108921 intron toc - chr2L 3108975 intron toc - chr2L_13_3105001 chr2L_3105001 RAL-757 69 chr2L 3112489 3112497 chr2L 3112557 3112577 4 76 8.5 5.0 6.8 0.5 88 chr2L 3112489 intron toc - chr2L 3112533 intron toc - chr2L 3112577 intron toc - chr2L_4_3110001 chr2L_3110001 RAL-757 70 chr2L 3202740 3202763 chr2L 3210165 3210192 mdg1 7 7428 3.0 5.5 4.2 1.3 7452 chr2L 3202740 intergenic not near genes chr2L 3206466 intergenic not near genes chr2L 3210192 intergenic CR45336 + chr2L_7_3205001 chr2L_3205001 RAL-757 71 chr2L 3210371 3210377 chr2L 3210507 3210507 4 136 5.5 2.5 4.0 0.8 136 chr2L 3210371 intergenic CR45336 + chr2L 3210439 intergenic CR45336 + chr2L 3210507 intergenic CR45336 + chr2L_4_3210001 chr2L_3210001 RAL-757 72 chr2L 3212906 3212927 chr2L 3213060 3213064 9 152 3.0 4.5 3.8 1.9 158 chr2L 3212906 intergenic not near genes chr2L 3212985 intergenic not near genes chr2L 3213064 intergenic not near genes chr2L_9_3210001 chr2L_3210001 RAL-757 73 chr2L 3251502 3251524 chr2L 3259067 3259087 springer 8 7565 6.5 8.0 7.2 1.0 7585 chr2L 3251502 intergenic not near genes chr2L 3255294 intergenic not near genes chr2L 3259087 intergenic not near genes chr2L_8_3255001 chr2L_3255001 RAL-757 74 chr2L 3291240 3291265 chr2L 3291316 3291324 8 74 3.5 3.5 3.5 1.8 84 chr2L 3291240 intergenic CG9664 - chr2L 3291282 3` UTR CG9664 - chr2L 3291324 3` UTR CG9664 - chr2L_8_3290001 chr2L_3290001 RAL-757 75 chr2L 3388599 3388631 chr2L 3388840 3388872 pogo 13 238 8.5 4.5 6.5 1.7 273 chr2L 3388599 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388872 intergenic CG42460 -,CR44791 + chr2L_13_3385001 chr2L_3385001 RAL-757 76 chr2L 3395410 3395426 chr2L 3395820 3395836 8 409 3.5 3.5 3.5 1.8 426 chr2L 3395410 intergenic not near genes chr2L 3395623 intergenic not near genes chr2L 3395836 intergenic not near genes chr2L_8_3395001 chr2L_3395001 RAL-757 77 chr2L 3396593 3396622 chr2L 3396790 3396819 14 194 2.5 4.0 3.2 3.3 226 chr2L 3396593 intergenic not near genes chr2L 3396706 intergenic not near genes chr2L 3396819 intergenic not near genes chr2L_14_3395001 chr2L_3395001 RAL-757 78 chr2L 3447655 3447689 chr2L 3447750 3447754 17 90 7.0 3.5 5.2 2.7 99 chr2L 3447655 intergenic CG2772 + chr2L 3447704 intergenic CG2772 + chr2L 3447754 intergenic CG2772 + chr2L_17_3445001 chr2L_3445001 RAL-757 79 chr2L 3493860 3493884 chr2L 3495459 3495482 8 1602 34.5 41.0 37.8 0.2 1622 chr2L 3493860 intergenic tim - chr2L 3494671 intron tim - chr2L 3495482 3` UTR tim - chr2L_8_3490001 chr2L_3490001 RAL-757 80 chr2L 3582880 3582884 chr2L 3582957 3582961 7 77 4.0 2.5 3.2 1.7 81 chr2L 3582880 intergenic not near genes chr2L 3582920 intergenic not near genes chr2L 3582961 intergenic not near genes chr2L_7_3580001 chr2L_3580001 RAL-757 81 chr2L 3582887 3582910 chr2L 3582955 3582987 15 75 3.0 2.5 2.8 3.9 100 chr2L 3582887 intergenic not near genes chr2L 3582937 intergenic not near genes chr2L 3582987 intergenic not near genes chr2L_15_3580001 chr2L_3580001 RAL-757 82 chr2L 3601089 3601118 chr2L 3601174 3601177 6 77 5.0 0.0 2.5 1.7 88 chr2L 3601089 intergenic not near genes chr2L 3601133 intergenic not near genes chr2L 3601177 intergenic not near genes chr2L_6_3600001 chr2L_3600001 RAL-757 83 chr2L 3785619 3785636 chr2L 3786373 3786378 4 749 5.0 19.5 12.2 0.3 759 chr2L 3785619 3` UTR CG31960 + chr2L 3785998 exon CG31958 + chr2L 3786378 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-757 84 chr2L 3814627 3814644 chr2L 3814692 3814724 7 75 4.5 6.5 5.5 1.1 97 chr2L 3814627 intergenic not near genes chr2L 3814676 intergenic not near genes chr2L 3814724 intergenic not near genes chr2L_7_3810001 chr2L_3810001 RAL-757 85 chr2L 3831859 3831864 chr2L 3831919 3831945 9 77 5.0 5.5 5.2 1.5 86 chr2L 3831859 intergenic not near genes chr2L 3831902 intergenic not near genes chr2L 3831945 intergenic not near genes chr2L_9_3830001 chr2L_3830001 RAL-757 86 chr2L 3910141 3910177 chr2L 3910299 3910321 16 153 4.0 2.0 3.0 4.0 180 chr2L 3910141 intron fred - chr2L 3910231 intron fred - chr2L 3910321 intron fred - chr2L_16_3910001 chr2L_3910001 RAL-757 87 chr2L 3950082 3950101 chr2L 3950158 3950167 13 74 4.5 6.0 5.2 2.1 85 chr2L 3950082 intron fred - chr2L 3950124 intron fred - chr2L 3950167 intron fred - chr2L_13_3950001 chr2L_3950001 RAL-757 88 chr2L 4036687 4036695 chr2L 4036774 4036782 4 87 10.0 6.5 8.2 0.4 95 chr2L 4036687 intron ed + chr2L 4036734 intron ed + chr2L 4036782 intron ed + chr2L_4_4035001 chr2L_4035001 RAL-757 89 chr2L 4036698 4036718 chr2L 4036771 4036805 17 78 3.0 6.0 4.5 3.1 107 chr2L 4036698 intron ed + chr2L 4036752 intron ed + chr2L 4036805 intron ed + chr2L_17_4035001 chr2L_4035001 RAL-757 90 chr2L 4037804 4037809 chr2L 4037891 4037896 4 87 5.5 2.5 4.0 0.8 92 chr2L 4037804 intron ed + chr2L 4037850 intron ed + chr2L 4037896 intron ed + chr2L_4_4035001 chr2L_4035001 RAL-757 91 chr2L 4060165 4060198 chr2L 4060241 4060274 6 70 0.5 2.5 1.5 2.4 109 chr2L 4060165 intron ed + chr2L 4060220 intron ed + chr2L 4060274 intron ed + chr2L_6_4060001 chr2L_4060001 RAL-757 92 chr2L 4066051 4066066 chr2L 4068862 4068883 Juan 11 2820 4.5 2.5 3.5 2.4 2832 chr2L 4066051 intron ed + chr2L 4067467 intron ed + chr2L 4068883 intron ed + chr2L_11_4065001 chr2L_4065001 RAL-757 93 chr2L 4092406 4092423 chr2L 4092487 4092492 7 84 6.5 5.0 5.8 1.0 86 chr2L 4092406 intron ed + chr2L 4092449 intron ed + chr2L 4092492 intron ed + chr2L_7_4090001 chr2L_4090001 RAL-757 94 chr2L 4126214 4126238 chr2L 4126291 4126316 14 75 5.5 7.0 6.2 1.9 102 chr2L 4126214 intergenic not near genes chr2L 4126265 intergenic not near genes chr2L 4126316 intergenic not near genes chr2L_14_4125001 chr2L_4125001 RAL-757 95 chr2L 4152252 4152253 chr2L 16217660 16217660 7 12065408 28.5 37.0 32.8 0.2 12065408 chr2L 4152252 intergenic not near genes chr2L 10184956 exon Sur - chr2L 16217660 intergenic not near genes chr2L_7_10180001 chr2L_10180001 RAL-757 96 chr2L 4159410 4159421 chr2L 4159610 4159621 6 199 5.0 1.0 3.0 1.5 211 chr2L 4159410 intergenic not near genes chr2L 4159516 intergenic not near genes chr2L 4159621 intergenic not near genes chr2L_6_4155001 chr2L_4155001 RAL-757 97 chr2L 4166377 4166408 chr2L 4166460 4166491 7 83 3.5 1.0 2.2 2.2 114 chr2L 4166377 intergenic Or24a - chr2L 4166434 intergenic Or24a - chr2L 4166491 intergenic Or24a - chr2L_7_4165001 chr2L_4165001 RAL-757 98 chr2L 4181293 4181303 chr2L 4183925 4183935 Burdock 4 2632 7.0 13.5 10.2 0.4 2642 chr2L 4181293 intergenic not near genes chr2L 4182614 intergenic not near genes chr2L 4183935 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-757 99 chr2L 4184496 4184507 chr2L 4184800 4184826 10 317 0.5 6.5 3.5 2.2 330 chr2L 4184496 intergenic not near genes chr2L 4184661 intergenic not near genes chr2L 4184826 intergenic not near genes chr2L_10_4180001 chr2L_4180001 RAL-757 100 chr2L 4243698 4243728 chr2L 4243789 4243817 11 86 4.0 6.5 5.2 1.8 119 chr2L 4243698 intergenic not near genes chr2L 4243758 intergenic not near genes chr2L 4243817 intergenic not near genes chr2L_11_4240001 chr2L_4240001 RAL-757 101 chr2L 4277718 4277737 chr2L 4277802 4277825 13 87 8.5 7.5 8.0 1.4 107 chr2L 4277718 3` UTR Art2 - chr2L 4277772 3` UTR Art2 - chr2L 4277825 3` UTR Art2 - chr2L_13_4275001 chr2L_4275001 RAL-757 102 chr2L 4351472 4351502 chr2L 4351548 4351578 18 69 4.5 1.5 3.0 4.5 106 chr2L 4351472 intergenic CR44700 + chr2L 4351525 intergenic CR44700 + chr2L 4351578 intergenic CR44700 + chr2L_18_4350001 chr2L_4350001 RAL-757 103 chr2L 4601703 4601737 chr2L 4609143 4609177 mdg1 22 7435 3.5 10.0 6.8 2.8 7474 chr2L 4601703 intron dp - chr2L 4605440 intron dp - chr2L 4609177 intron dp - chr2L_22_4605001 chr2L_4605001 RAL-757 104 chr2L 4661484 4661508 chr2L 4661565 4661572 5 77 3.0 8.0 5.5 0.8 88 chr2L 4661484 intergenic not near genes chr2L 4661528 intergenic not near genes chr2L 4661572 intergenic not near genes chr2L_5_4660001 chr2L_4660001 RAL-757 105 chr2L 4661852 4661858 chr2L 4669429 4669436 opus 4 7578 3.0 7.5 5.2 0.6 7584 chr2L 4661852 intergenic not near genes chr2L 4665644 intergenic not near genes chr2L 4669436 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-757 106 chr2L 4819496 4819518 chr2L 4819619 4819628 9 119 3.0 8.0 5.5 1.4 132 chr2L 4819496 intergenic not near genes chr2L 4819562 intergenic not near genes chr2L 4819628 intergenic not near genes chr2L_9_4815001 chr2L_4815001 RAL-757 107 chr2L 4825829 4825853 chr2L 4826128 4826149 9 298 2.0 3.0 2.5 2.6 320 chr2L 4825829 intron CG15628 + chr2L 4825989 intron CG15628 + chr2L 4826149 intron CG15628 + chr2L_9_4825001 chr2L_4825001 RAL-757 108 chr2L 4858468 4858483 chr2L 4858555 4858571 5 88 2.5 0.0 1.2 2.3 103 chr2L 4858468 intron pog + chr2L 4858520 intron pog + chr2L 4858571 intron pog + chr2L_5_4855001 chr2L_4855001 RAL-757 109 chr2L 4918169 4918194 chr2L 4923241 4923249 jockey 11 5070 8.0 1.0 4.5 2.0 5080 chr2L 4918169 intron hoe1 - chr2L 4920709 intron hoe1 - chr2L 4923249 intron hoe1 - chr2L_11_4920001 chr2L_4920001 RAL-757 110 chr2L 4923241 4923256 chr2L 4923322 4923346 13 89 0.0 1.0 0.5 8.7 105 chr2L 4923241 intron hoe1 - chr2L 4923294 intron hoe1 - chr2L 4923346 intron hoe1 - chr2L_13_4920001 chr2L_4920001 RAL-757 111 chr2L 4953529 4953535 chr2L 4953770 4953776 pogo 4 241 7.5 0.5 4.0 0.8 247 chr2L 4953529 intergenic Jon25Bii - chr2L 4953652 intergenic not near genes chr2L 4953776 intergenic not near genes chr2L_4_4950001 chr2L_4950001 RAL-757 112 chr2L 5027959 5027989 chr2L 5028043 5028073 14 80 5.5 8.5 7.0 1.8 114 chr2L 5027959 intron vkg - chr2L 5028016 intron vkg - chr2L 5028073 intron vkg - chr2L_14_5025001 chr2L_5025001 RAL-757 113 chr2L 5040685 5040716 chr2L 5040781 5040812 19 89 5.5 4.0 4.8 3.3 127 chr2L 5040685 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040748 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040812 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L_19_5040001 chr2L_5040001 RAL-757 114 chr2L 5117298 5117324 chr2L 5117380 5117406 9 81 5.5 2.5 4.0 1.8 108 chr2L 5117298 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117406 intron Msp300 + chr2L_9_5115001 chr2L_5115001 RAL-757 115 chr2L 5120973 5121006 chr2L 5121067 5121084 16 92 4.5 4.5 4.5 2.9 111 chr2L 5120973 intron Msp300 + chr2L 5121028 intron Msp300 + chr2L 5121084 intron Msp300 + chr2L_16_5120001 chr2L_5120001 RAL-757 116 chr2L 5276720 5276734 chr2L 5276804 5276818 5 84 2.0 3.5 2.8 1.3 98 chr2L 5276720 exon Bsg25D - chr2L 5276769 intron Bsg25D - chr2L 5276818 intron Bsg25D - chr2L_5_5275001 chr2L_5275001 RAL-757 117 chr2L 5342776 5342793 chr2L 5345152 5345173 Doc 10 2378 11.0 7.0 9.0 1.0 2397 chr2L 5342776 intergenic not near genes chr2L 5343974 intergenic not near genes chr2L 5345173 intergenic not near genes chr2L_10_5340001 chr2L_5340001 RAL-757 118 chr2L 5387877 5387908 chr2L 5387954 5387982 15 72 7.5 4.0 5.8 2.2 105 chr2L 5387877 5` UTR CR44745 + chr2L 5387930 5` UTR CR44745 + chr2L 5387982 5` UTR CR44745 + chr2L_15_5385001 chr2L_5385001 RAL-757 119 chr2L 5436110 5436119 chr2L 5436217 5436221 4 105 6.5 0.5 3.5 0.9 111 chr2L 5436110 3` UTR CR31647 - chr2L 5436166 3` UTR CR31647 - chr2L 5436221 3` UTR CR31647 - chr2L_4_5435001 chr2L_5435001 RAL-757 120 chr2L 5500060 5500080 chr2L 5500146 5500166 4 86 6.0 3.0 4.5 0.7 106 chr2L 5500060 intergenic not near genes chr2L 5500113 intergenic not near genes chr2L 5500166 intergenic not near genes chr2L_4_5500001 chr2L_5500001 RAL-757 121 chr2L 5563692 5563718 chr2L 5563776 5563802 4 84 4.5 4.5 4.5 0.7 110 chr2L 5563692 intergenic GluRIIB + chr2L 5563747 intergenic GluRIIB + chr2L 5563802 intergenic GluRIIB + chr2L_4_5560001 chr2L_5560001 RAL-757 122 chr2L 5726216 5726243 chr2L 5726295 5726322 12 79 4.0 1.0 2.5 3.4 106 chr2L 5726216 intron CG11030 + chr2L 5726269 intron CG11030 + chr2L 5726322 intron CG11030 + chr2L_12_5725001 chr2L_5725001 RAL-757 123 chr2L 5749898 5749923 chr2L 5749975 5749976 5 61 8.5 6.0 7.2 0.6 78 chr2L 5749898 intron CG11030 + chr2L 5749937 intron CG11030 + chr2L 5749976 intron CG11030 + chr2L_5_5745001 chr2L_5745001 RAL-757 124 chr2L 5827708 5827741 chr2L 5836713 5836749 roo 23 9002 7.5 3.0 5.2 3.7 9041 chr2L 5827708 intron TrissinR + chr2L 5832228 intron TrissinR + chr2L 5836749 intron TrissinR + chr2L_23_5830001 chr2L_5830001 RAL-757 125 chr2L 5839183 5839197 chr2L 5839252 5839286 6 76 1.0 5.0 3.0 1.5 103 chr2L 5839183 intron TrissinR + chr2L 5839234 intron TrissinR + chr2L 5839286 intron TrissinR + chr2L_6_5835001 chr2L_5835001 RAL-757 126 chr2L 5900264 5900294 chr2L 5900356 5900371 5 83 4.5 7.5 6.0 0.7 107 chr2L 5900264 3` UTR CR44579 - chr2L 5900318 3` UTR CR44579 - chr2L 5900371 3` UTR CR44579 - chr2L_5_5900001 chr2L_5900001 RAL-757 127 chr2L 5904461 5904466 chr2L 5904541 5904546 5 80 1.0 0.0 0.5 3.3 85 chr2L 5904461 intron CG9021 - chr2L 5904504 intron CG9021 - chr2L 5904546 intron CG9021 - chr2L_5_5900001 chr2L_5900001 RAL-757 128 chr2L 5904468 5904475 chr2L 5904540 5904555 6 79 0.0 0.0 0.0 6.0 87 chr2L 5904468 intron CG9021 - chr2L 5904512 intron CG9021 - chr2L 5904555 intron CG9021 - chr2L_6_5900001 chr2L_5900001 RAL-757 129 chr2L 5931318 5931332 chr2L 5931430 5931441 8 111 3.5 10.5 7.0 1.0 123 chr2L 5931318 intron dsf + chr2L 5931380 intron dsf + chr2L 5931441 intron dsf + chr2L_8_5930001 chr2L_5930001 RAL-757 130 chr2L 6020312 6020341 chr2L 6020728 6020747 10 411 3.0 5.0 4.0 2.0 435 chr2L 6020312 intergenic not near genes chr2L 6020530 intergenic CG13996 + chr2L 6020747 intergenic CG13996 + chr2L_10_6020001 chr2L_6020001 RAL-757 131 chr2L 6021627 6021650 chr2L 6021704 6021714 7 73 1.5 0.0 0.8 3.9 87 chr2L 6021627 exon CG13996 + chr2L 6021670 exon CG13996 + chr2L 6021714 3` UTR CG13996 + chr2L_7_6020001 chr2L_6020001 RAL-757 132 chr2L 6050441 6050467 chr2L 6050545 6050571 7 103 9.0 4.5 6.8 0.9 130 chr2L 6050441 intergenic CG12393 +,CG9135 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050571 intergenic CG12393 +,CG9135 + chr2L_7_6050001 chr2L_6050001 RAL-757 133 chr2L 6070899 6070905 chr2L 6070988 6070994 4 88 2.0 8.0 5.0 0.7 95 chr2L 6070899 intergenic Kr-h2 +,CG9154 - chr2L 6070946 intergenic Kr-h2 +,CG9154 - chr2L 6070994 5` UTR Kr-h2 + chr2L_4_6070001 chr2L_6070001 RAL-757 134 chr2L 6070909 6070926 chr2L 6070986 6071013 9 80 2.0 8.0 5.0 1.5 104 chr2L 6070909 intergenic Kr-h2 +,CG9154 - chr2L 6070961 intergenic Kr-h2 +,CG9154 - chr2L 6071013 5` UTR Kr-h2 + chr2L_9_6070001 chr2L_6070001 RAL-757 135 chr2L 6130773 6130791 chr2L 6130854 6130875 7 84 6.5 0.0 3.2 1.7 102 chr2L 6130773 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130824 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130875 intergenic CG9222 +,CG42730 -,tectonic - chr2L_7_6130001 chr2L_6130001 RAL-757 136 chr2L 6227723 6227726 chr2L 6227807 6227810 4 84 8.5 5.0 6.8 0.5 87 chr2L 6227723 intergenic not near genes chr2L 6227766 intergenic not near genes chr2L 6227810 intergenic not near genes chr2L_4_6225001 chr2L_6225001 RAL-757 137 chr2L 6283945 6283973 chr2L 6284056 6284084 5 111 2.0 1.5 1.8 1.8 139 chr2L 6283945 intron Ddr + chr2L 6284014 intron Ddr + chr2L 6284084 intron Ddr + chr2L_5_6280001 chr2L_6280001 RAL-757 138 chr2L 6299813 6299831 chr2L 6299980 6299982 4 164 3.5 1.0 2.2 1.2 169 chr2L 6299813 intron Ddr + chr2L 6299898 intron Ddr + chr2L 6299982 intron Ddr + chr2L_4_6295001 chr2L_6295001 RAL-757 139 chr2L 6363168 6363183 chr2L 6366070 6366105 Burdock 7 2915 4.5 2.5 3.5 1.6 2937 chr2L 6363168 intergenic not near genes chr2L 6364636 intergenic not near genes chr2L 6366105 intergenic not near genes chr2L_7_6360001 chr2L_6360001 RAL-757 140 chr2L 6397698 6397728 chr2L 6397949 6397979 15 248 2.0 6.0 4.0 3.0 281 chr2L 6397698 intron CG42368 - chr2L 6397838 intron CG42368 - chr2L 6397979 intron CG42368 - chr2L_15_6395001 chr2L_6395001 RAL-757 141 chr2L 6426855 6426888 chr2L 6445114 6445148 roo 15 18258 6.5 6.5 6.5 2.0 18293 chr2L 6426855 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445148 exon CG9527 - chr2L_15_6435001 chr2L_6435001 RAL-757 142 chr2L 6537147 6537165 chr2L 6537225 6537243 6 78 4.0 5.5 4.8 1.0 96 chr2L 6537147 intron eya - chr2L 6537195 intron eya - chr2L 6537243 intron eya - chr2L_6_6535001 chr2L_6535001 RAL-757 143 chr2L 6544370 6544392 chr2L 6544462 6544484 9 91 8.0 4.5 6.2 1.2 114 chr2L 6544370 intron eya - chr2L 6544427 intron eya - chr2L 6544484 intron eya - chr2L_9_6540001 chr2L_6540001 RAL-757 144 chr2L 6598118 6598152 chr2L 6599075 6599094 9 954 3.0 2.0 2.5 2.6 976 chr2L 6598118 intron CG11319 - chr2L 6598606 intron CG11319 - chr2L 6599094 intron CG11319 - chr2L_9_6595001 chr2L_6595001 RAL-757 145 chr2L 6677652 6677682 chr2L 6677734 6677765 13 78 2.0 2.5 2.2 4.1 113 chr2L 6677652 intergenic CG11329 -,Nhe3 - chr2L 6677708 intergenic CG11329 -,Nhe3 - chr2L 6677765 intergenic Nhe3 -,CG11329 - chr2L_13_6675001 chr2L_6675001 RAL-757 146 chr2L 6771427 6771442 chr2L 6771489 6771521 5 70 2.5 1.0 1.8 1.8 94 chr2L 6771427 intron CG11321 - chr2L 6771474 intron CG11321 - chr2L 6771521 intron CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-757 147 chr2L 6850384 6850413 chr2L 6850460 6850496 14 78 4.0 3.5 3.8 2.9 112 chr2L 6850384 intergenic not near genes chr2L 6850440 intergenic not near genes chr2L 6850496 intergenic not near genes chr2L_14_6850001 chr2L_6850001 RAL-757 148 chr2L 6876774 6876810 chr2L 6882965 6883001 diver 8 6184 7.5 5.5 6.5 1.1 6227 chr2L 6876774 intron Nlg2 + chr2L 6879888 intron Nlg2 + chr2L 6883001 intron Nlg2 + chr2L_8_6875001 chr2L_6875001 RAL-757 149 chr2L 7088892 7088900 chr2L 7089078 7089101 4 197 0.0 4.0 2.0 1.3 209 chr2L 7088892 intergenic not near genes chr2L 7088996 intergenic not near genes chr2L 7089101 intergenic not near genes chr2L_4_7085001 chr2L_7085001 RAL-757 150 chr2L 7111768 7111791 chr2L 7111843 7111876 7 83 0.0 0.0 0.0 7.0 108 chr2L 7111768 intron Pvf3 - chr2L 7111822 intron Pvf3 - chr2L 7111876 intron Pvf3 - chr2L_7_7110001 chr2L_7110001 RAL-757 151 chr2L 7113309 7113337 chr2L 7113385 7113413 13 73 5.5 4.5 5.0 2.2 104 chr2L 7113309 intron Pvf3 - chr2L 7113361 intron Pvf3 - chr2L 7113413 intron Pvf3 - chr2L_13_7110001 chr2L_7110001 RAL-757 152 chr2L 7125790 7125807 chr2L 7125906 7125922 5 116 2.5 2.5 2.5 1.4 132 chr2L 7125790 intron Pvf3 - chr2L 7125856 intron Pvf3 - chr2L 7125922 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RAL-757 153 chr2L 7126864 7126877 chr2L 7126943 7126956 8 77 0.0 1.0 0.5 5.3 92 chr2L 7126864 intron Pvf3 - chr2L 7126910 intron Pvf3 - chr2L 7126956 intron Pvf3 - chr2L_8_7125001 chr2L_7125001 RAL-757 154 chr2L 7162796 7162816 chr2L 7162980 7162998 6 181 6.5 3.0 4.8 1.0 202 chr2L 7162796 intergenic not near genes chr2L 7162897 intergenic not near genes chr2L 7162998 intergenic not near genes chr2L_6_7160001 chr2L_7160001 RAL-757 155 chr2L 7335201 7335229 chr2L 7335298 7335326 14 95 6.0 2.0 4.0 2.8 125 chr2L 7335201 intron Wnt6 + chr2L 7335264 intron Wnt6 + chr2L 7335326 intron Wnt6 + chr2L_14_7335001 chr2L_7335001 RAL-757 156 chr2L 7370799 7370810 chr2L 7370904 7370915 6 105 6.5 3.0 4.8 1.0 116 chr2L 7370799 intron Wnt10 + chr2L 7370857 intron Wnt10 + chr2L 7370915 intron Wnt10 + chr2L_6_7370001 chr2L_7370001 RAL-757 157 chr2L 7399305 7399333 chr2L 7399678 7399705 7 372 5.0 8.5 6.8 0.9 400 chr2L 7399305 intergenic not near genes chr2L 7399505 intergenic not near genes chr2L 7399705 intergenic not near genes chr2L_7_7395001 chr2L_7395001 RAL-757 158 chr2L 7436199 7436202 chr2L 7436293 7436296 4 94 4.0 6.0 5.0 0.7 97 chr2L 7436199 intergenic not near genes chr2L 7436248 intergenic not near genes chr2L 7436296 intergenic not near genes chr2L_4_7435001 chr2L_7435001 RAL-757 159 chr2L 7447790 7447821 chr2L 7447885 7447916 10 92 4.0 5.5 4.8 1.7 126 chr2L 7447790 5` UTR santa-maria - chr2L 7447853 5` UTR santa-maria - chr2L 7447916 5` UTR santa-maria - chr2L_10_7445001 chr2L_7445001 RAL-757 160 chr2L 7487306 7487325 chr2L 7487374 7487400 6 68 4.5 3.5 4.0 1.2 94 chr2L 7487306 intron Ziz - chr2L 7487353 intron Ziz - chr2L 7487400 intron Ziz - chr2L_6_7485001 chr2L_7485001 RAL-757 161 chr2L 7489699 7489729 chr2L 7489788 7489818 12 87 7.0 7.0 7.0 1.5 119 chr2L 7489699 intron Ziz - chr2L 7489758 intron Ziz - chr2L 7489818 intron Ziz - chr2L_12_7485001 chr2L_7485001 RAL-757 162 chr2L 7567932 7567956 chr2L 7568008 7568032 6 76 0.5 3.5 2.0 2.0 100 chr2L 7567932 intron RapGAP1 - chr2L 7567982 intron RapGAP1 - chr2L 7568032 intron RapGAP1 - chr2L_6_7565001 chr2L_7565001 RAL-757 163 chr2L 7579195 7579206 chr2L 7579386 7579397 BS 12 190 9.0 4.0 6.5 1.6 202 chr2L 7579195 intergenic RapGAP1 - chr2L 7579296 intergenic RapGAP1 - chr2L 7579397 intergenic RapGAP1 - chr2L_12_7575001 chr2L_7575001 RAL-757 164 chr2L 7579208 7579231 chr2L 7579383 7579405 BS 11 187 7.0 3.5 5.2 1.8 197 chr2L 7579208 intergenic RapGAP1 - chr2L 7579306 intergenic RapGAP1 - chr2L 7579405 intergenic RapGAP1 - chr2L_11_7575001 chr2L_7575001 RAL-757 165 chr2L 7609689 7609717 chr2L 7609763 7609793 6 76 3.0 4.5 3.8 1.2 104 chr2L 7609689 intron CG6739 + chr2L 7609741 intron CG6739 + chr2L 7609793 intron CG6739 + chr2L_6_7605001 chr2L_7605001 RAL-757 166 chr2L 7653047 7653075 chr2L 7653141 7653151 13 89 4.5 0.0 2.2 4.1 104 chr2L 7653047 intron Slob - chr2L 7653099 intron Slob - chr2L 7653151 intron Slob - chr2L_13_7650001 chr2L_7650001 RAL-757 167 chr2L 7655410 7655415 chr2L 7655499 7655505 4 90 5.0 9.0 7.0 0.5 95 chr2L 7655410 intron Slob - chr2L 7655458 intron Slob - chr2L 7655505 intron Slob - chr2L_4_7655001 chr2L_7655001 RAL-757 168 chr2L 7655418 7655425 chr2L 7655489 7655515 5 79 3.5 7.0 5.2 0.8 97 chr2L 7655418 intron Slob - chr2L 7655466 intron Slob - chr2L 7655515 intron Slob - chr2L_5_7655001 chr2L_7655001 RAL-757 169 chr2L 7664050 7664063 chr2L 7664145 7664158 4 94 5.0 7.5 6.2 0.6 108 chr2L 7664050 intron Slob - chr2L 7664104 intron Slob - chr2L 7664158 intron Slob - chr2L_4_7660001 chr2L_7660001 RAL-757 170 chr2L 7768848 7768879 chr2L 7768924 7768934 10 71 1.0 5.0 3.0 2.5 86 chr2L 7768848 intron CG7191 + chr2L 7768891 intron CG7191 + chr2L 7768934 intron CG7191 + chr2L_10_7765001 chr2L_7765001 RAL-757 171 chr2L 7835562 7835570 chr2L 7837116 7837141 5 1568 10.0 26.5 18.2 0.3 1579 chr2L 7835562 intergenic not near genes chr2L 7836352 intergenic not near genes chr2L 7837141 intergenic not near genes chr2L_5_7835001 chr2L_7835001 RAL-757 172 chr2L 7835379 7835387 chr2L 7837953 7837967 4 2578 36.0 11.5 23.8 0.2 2588 chr2L 7835379 intergenic not near genes chr2L 7836673 intergenic not near genes chr2L 7837967 intergenic not near genes chr2L_4_7835001 chr2L_7835001 RAL-757 173 chr2L 7867564 7867580 chr2L 7867658 7867674 6 92 7.0 6.5 6.8 0.8 110 chr2L 7867564 intron Proc - chr2L 7867619 intron Proc - chr2L 7867674 intron Proc - chr2L_6_7865001 chr2L_7865001 RAL-757 174 chr2L 7867583 7867604 chr2L 7867657 7867660 12 86 3.5 6.5 5.0 2.0 77 chr2L 7867583 intron Proc - chr2L 7867622 intron Proc - chr2L 7867660 intron Proc - chr2L_12_7865001 chr2L_7865001 RAL-757 175 chr2L 7955323 7955337 chr2L 7955406 7955420 7 81 14.0 4.0 9.0 0.7 97 chr2L 7955323 intron Snoo - chr2L 7955372 intron Snoo - chr2L 7955420 intron Snoo - chr2L_7_7955001 chr2L_7955001 RAL-757 176 chr2L 7955338 7955349 chr2L 7955405 7955420 4 71 8.0 4.0 6.0 0.6 82 chr2L 7955338 intron Snoo - chr2L 7955379 intron Snoo - chr2L 7955420 intron Snoo - chr2L_4_7955001 chr2L_7955001 RAL-757 177 chr2L 8013615 8013645 chr2L 8018819 8018834 copia 8 5199 5.5 0.5 3.0 2.0 5219 chr2L 8013615 intron Tg + chr2L 8016224 intron Tg + chr2L 8018834 intron Tg + chr2L_8_8015001 chr2L_8015001 RAL-757 178 chr2L 8018830 8018837 chr2L 8023614 8023621 Doc 6 4784 1.0 13.5 7.2 0.7 4791 chr2L 8018830 intron Tg + chr2L 8021226 intron Tg + chr2L 8023621 intron Tg + chr2L_6_8020001 chr2L_8020001 RAL-757 179 chr2L 8044111 8044121 chr2L 8044178 8044179 4 71 1.0 5.5 3.2 1.0 68 chr2L 8044111 intron CG7466 + chr2L 8044145 intron CG7466 + chr2L 8044179 intron CG7466 + chr2L_4_8040001 chr2L_8040001 RAL-757 180 chr2L 8044122 8044131 chr2L 8044175 8044210 5 68 1.0 5.5 3.2 1.2 88 chr2L 8044122 intron CG7466 + chr2L 8044166 intron CG7466 + chr2L 8044210 intron CG7466 + chr2L_5_8040001 chr2L_8040001 RAL-757 181 chr2L 8167145 8167181 chr2L 8167236 8167266 14 88 3.0 4.5 3.8 2.9 121 chr2L 8167145 intron Piezo + chr2L 8167206 intron Piezo + chr2L 8167266 intron Piezo + chr2L_14_8165001 chr2L_8165001 RAL-757 182 chr2L 8171282 8171299 chr2L 8171351 8171380 9 72 2.5 5.5 4.0 1.8 98 chr2L 8171282 intron Piezo + chr2L 8171331 intron Piezo + chr2L 8171380 intron Piezo + chr2L_9_8170001 chr2L_8170001 RAL-757 183 chr2L 8238914 8238916 chr2L 8238987 8239005 4 82 0.0 1.0 0.5 2.7 91 chr2L 8238914 intron Pvr - chr2L 8238960 intron Pvr - chr2L 8239005 intron Pvr - chr2L_4_8235001 chr2L_8235001 RAL-757 184 chr2L 8244732 8244748 chr2L 8244853 8244864 10 121 0.5 6.0 3.2 2.4 132 chr2L 8244732 intron CG8086 - chr2L 8244798 intron CG8086 - chr2L 8244864 intron CG8086 - chr2L_10_8240001 chr2L_8240001 RAL-757 185 chr2L 8286296 8286329 chr2L 8286383 8286404 6 84 2.5 8.0 5.2 1.0 108 chr2L 8286296 intron Btk29A - chr2L 8286350 intron Btk29A - chr2L 8286404 intron Btk29A - chr2L_6_8285001 chr2L_8285001 RAL-757 186 chr2L 8331553 8331559 chr2L 8331632 8331637 4 79 0.0 0.0 0.0 4.0 84 chr2L 8331553 intron CG14275 + chr2L 8331595 intron CG14275 + chr2L 8331637 intron CG14275 + chr2L_4_8330001 chr2L_8330001 RAL-757 187 chr2L 8336936 8336960 chr2L 8337013 8337019 6 75 0.0 3.5 1.8 2.1 83 chr2L 8336936 intergenic not near genes chr2L 8336978 intergenic not near genes chr2L 8337019 intergenic not near genes chr2L_6_8335001 chr2L_8335001 RAL-757 188 chr2L 8341845 8341876 chr2L 8341961 8341966 7 110 5.0 4.5 4.8 1.2 121 chr2L 8341845 3` UTR CG14274 + chr2L 8341906 3` UTR CG14274 + chr2L 8341966 3` UTR CG14274 + chr2L_7_8340001 chr2L_8340001 RAL-757 189 chr2L 8351573 8351586 chr2L 8351650 8351663 8 75 5.5 11.0 8.2 0.9 90 chr2L 8351573 intergenic CG7778 + chr2L 8351618 intergenic not near genes chr2L 8351663 intergenic not near genes chr2L_8_8350001 chr2L_8350001 RAL-757 190 chr2L 8452427 8452448 chr2L 8461590 8461619 roo 17 9166 7.0 7.0 7.0 2.1 9192 chr2L 8452427 intron fu12 - chr2L 8457023 intron fu12 - chr2L 8461619 intron fu12 - chr2L_17_8455001 chr2L_8455001 RAL-757 191 chr2L 8452450 8452453 chr2L 8461589 8461624 roo 6 9165 6.5 6.5 6.5 0.8 9174 chr2L 8452450 intron fu12 - chr2L 8457037 intron fu12 - chr2L 8461624 intron fu12 - chr2L_6_8455001 chr2L_8455001 RAL-757 192 chr2L 8461857 8461863 chr2L 8461937 8461944 5 81 2.5 4.0 3.2 1.2 87 chr2L 8461857 intron fu12 - chr2L 8461900 intron fu12 - chr2L 8461944 intron fu12 - chr2L_5_8460001 chr2L_8460001 RAL-757 193 chr2L 8461864 8461879 chr2L 8461922 8461939 9 75 0.5 2.0 1.2 4.1 75 chr2L 8461864 intron fu12 - chr2L 8461902 intron fu12 - chr2L 8461939 intron fu12 - chr2L_9_8460001 chr2L_8460001 RAL-757 194 chr2L 8508991 8509003 chr2L 8509093 8509105 7 100 0.0 5.0 2.5 2.0 114 chr2L 8508991 intergenic CG13096 - chr2L 8509048 intergenic CG13096 - chr2L 8509105 3` UTR CG13096 - chr2L_7_8505001 chr2L_8505001 RAL-757 195 chr2L 8538165 8538181 chr2L 8538241 8538248 11 73 10.0 0.0 5.0 1.8 83 chr2L 8538165 intron CG17834 + chr2L 8538206 intron CG17834 + chr2L 8538248 intron CG17834 + chr2L_11_8535001 chr2L_8535001 RAL-757 196 chr2L 8594483 8594498 chr2L 8601527 8601552 297 5 7049 4.0 4.5 4.2 1.0 7069 chr2L 8594483 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598018 intron Sema-1a + chr2L 8601552 intron Sema-1a + chr2L_5_8595001 chr2L_8595001 RAL-757 197 chr2L 8687091 8687096 chr2L 8687195 8687200 4 103 4.0 6.0 5.0 0.7 109 chr2L 8687091 intergenic Trs23 +,Hnf4 - chr2L 8687146 intergenic Hnf4 -,Trs23 + chr2L 8687200 intergenic Hnf4 -,Trs23 + chr2L_4_8685001 chr2L_8685001 RAL-757 198 chr2L 8723117 8723148 chr2L 8731494 8731525 Tirant 12 8375 4.5 7.5 6.0 1.7 8408 chr2L 8723117 intron raw - chr2L 8727321 intron raw - chr2L 8731525 intron raw - chr2L_12_8725001 chr2L_8725001 RAL-757 199 chr2L 8892030 8892052 chr2L 8892109 8892131 7 77 4.0 4.5 4.2 1.3 101 chr2L 8892030 3` UTR CG42713 + chr2L 8892080 3` UTR CG42713 + chr2L 8892131 3` UTR CG42713 + chr2L_7_8890001 chr2L_8890001 RAL-757 200 chr2L 8900382 8900407 chr2L 8900460 8900479 5 73 3.5 5.0 4.2 1.0 97 chr2L 8900382 intron CG34398 + chr2L 8900430 intron CG34398 + chr2L 8900479 intron CG34398 + chr2L_5_8900001 chr2L_8900001 RAL-757 201 chr2L 8939665 8939692 chr2L 8939745 8939772 13 78 4.0 7.0 5.5 2.0 107 chr2L 8939665 3` UTR Tsp29Fb + chr2L 8939718 3` UTR Tsp29Fb + chr2L 8939772 intergenic CG9510 -,Tsp29Fb + chr2L_13_8935001 chr2L_8935001 RAL-757 202 chr2L 8956226 8956243 chr2L 8956303 8956320 11 75 2.5 1.0 1.8 3.9 94 chr2L 8956226 intron CG31886 - chr2L 8956273 intron CG31886 - chr2L 8956320 intron CG31886 - chr2L_11_8955001 chr2L_8955001 RAL-757 203 chr2L 9000279 9000292 chr2L 9007789 9007802 roo 9 7508 13.0 8.0 10.5 0.8 7523 chr2L 9000279 intergenic Try29F + chr2L 9004040 intergenic not near genes chr2L 9007802 intergenic not near genes chr2L_9_9000001 chr2L_9000001 RAL-757 204 chr2L 9000294 9000313 chr2L 9007788 9007811 roo 16 7502 6.0 7.5 6.8 2.1 7517 chr2L 9000294 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007811 intergenic not near genes chr2L_16_9000001 chr2L_9000001 RAL-757 205 chr2L 9040889 9040894 chr2L 9040965 9040970 10 76 7.5 4.5 6.0 1.4 81 chr2L 9040889 intergenic not near genes chr2L 9040930 intergenic not near genes chr2L 9040970 intergenic not near genes chr2L_10_9040001 chr2L_9040001 RAL-757 206 chr2L 9040895 9040908 chr2L 9040960 9040975 10 68 4.5 4.0 4.2 1.9 80 chr2L 9040895 intergenic not near genes chr2L 9040935 intergenic not near genes chr2L 9040975 intergenic not near genes chr2L_10_9040001 chr2L_9040001 RAL-757 207 chr2L 9084338 9084340 chr2L 16217660 16217661 8 7133321 17.0 37.0 27.0 0.3 7133323 chr2L 9084338 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-757 208 chr2L 9113800 9113810 chr2L 9113910 9113920 4 108 4.0 3.5 3.8 0.8 120 chr2L 9113800 intergenic not near genes chr2L 9113860 intergenic not near genes chr2L 9113920 intergenic not near genes chr2L_4_9110001 chr2L_9110001 RAL-757 209 chr2L 9217973 9218003 chr2L 9222754 9222781 Doc 15 4780 9.0 9.0 9.0 1.5 4808 chr2L 9217973 intron tai + chr2L 9220377 intron tai + chr2L 9222781 intron tai + chr2L_15_9220001 chr2L_9220001 RAL-757 210 chr2L 9227239 9227246 chr2L 9227311 9227329 4 76 2.0 3.5 2.8 1.1 90 chr2L 9227239 intron tai + chr2L 9227284 intron tai + chr2L 9227329 intron tai + chr2L_4_9225001 chr2L_9225001 RAL-757 211 chr2L 9280006 9280024 chr2L 9280081 9280118 8 88 0.5 3.5 2.0 2.7 112 chr2L 9280006 intron Ggamma30A + chr2L 9280062 intron Ggamma30A + chr2L 9280118 intron Ggamma30A + chr2L_8_9280001 chr2L_9280001 RAL-757 212 chr2L 9287325 9287354 chr2L 9287421 9287444 14 94 0.5 7.0 3.8 2.9 119 chr2L 9287325 intron Ggamma30A + chr2L 9287384 intron Ggamma30A + chr2L 9287444 intron Ggamma30A + chr2L_14_9285001 chr2L_9285001 RAL-757 213 chr2L 9290791 9290799 chr2L 9290856 9290871 4 73 0.0 8.5 4.2 0.8 80 chr2L 9290791 intron Ggamma30A + chr2L 9290831 intron Ggamma30A + chr2L 9290871 intron Ggamma30A + chr2L_4_9290001 chr2L_9290001 RAL-757 214 chr2L 9297381 9297404 chr2L 9297456 9297471 13 75 4.0 4.5 4.2 2.5 90 chr2L 9297381 3` UTR Ggamma30A + chr2L 9297426 3` UTR Ggamma30A + chr2L 9297471 3` UTR Ggamma30A + chr2L_13_9295001 chr2L_9295001 RAL-757 215 chr2L 9364329 9364334 chr2L 9364398 9364421 5 82 0.0 4.5 2.2 1.6 92 chr2L 9364329 5` UTR CR43404 + chr2L 9364375 intron CR43404 + chr2L 9364421 intron CR43404 + chr2L_5_9360001 chr2L_9360001 RAL-757 216 chr2L 9368325 9368348 chr2L 9368461 9368484 4 140 15.0 38.5 26.8 0.1 159 chr2L 9368325 3` UTR CG34181 + chr2L 9368404 3` UTR CG34181 + chr2L 9368484 intergenic CG34181 + chr2L_4_9365001 chr2L_9365001 RAL-757 217 chr2L 9380291 9380320 chr2L 9380378 9380408 16 87 6.0 5.0 5.5 2.5 117 chr2L 9380291 intron Shawl - chr2L 9380350 intron Shawl - chr2L 9380408 intron Shawl - chr2L_16_9380001 chr2L_9380001 RAL-757 218 chr2L 9387264 9387278 chr2L 9387360 9387376 6 96 2.0 7.0 4.5 1.1 112 chr2L 9387264 intron Shawl - chr2L 9387320 intron Shawl - chr2L 9387376 intron Shawl - chr2L_6_9385001 chr2L_9385001 RAL-757 219 chr2L 9393498 9393531 chr2L 9396465 9396498 jockey 18 2965 5.5 8.5 7.0 2.2 3000 chr2L 9393498 intron Shawl - chr2L 9394998 intron Shawl - chr2L 9396498 intron Shawl - chr2L_18_9390001 chr2L_9390001 RAL-757 220 chr2L 9428513 9428533 chr2L 9428585 9428612 11 76 3.0 5.5 4.2 2.1 99 chr2L 9428513 3` UTR CG42847 + chr2L 9428562 3` UTR CG42847 + chr2L 9428612 3` UTR CG42847 + chr2L_11_9425001 chr2L_9425001 RAL-757 221 chr2L 9456935 9456951 chr2L 9457012 9457031 4 80 4.5 4.5 4.5 0.7 96 chr2L 9456935 intron numb + chr2L 9456983 intron numb + chr2L 9457031 intron numb + chr2L_4_9455001 chr2L_9455001 RAL-757 222 chr2L 9490522 9490549 chr2L 9490600 9490627 9 76 4.5 7.0 5.8 1.3 105 chr2L 9490522 intergenic not near genes chr2L 9490574 intergenic not near genes chr2L 9490627 intergenic not near genes chr2L_9_9490001 chr2L_9490001 RAL-757 223 chr2L 9506355 9506363 chr2L 9506443 9506451 5 87 8.5 0.0 4.2 1.0 96 chr2L 9506355 intron CG33298 + chr2L 9506403 intron CG33298 + chr2L 9506451 intron CG33298 + chr2L_5_9505001 chr2L_9505001 RAL-757 224 chr2L 9526848 9526865 chr2L 9526940 9526957 15 90 6.0 5.5 5.8 2.2 109 chr2L 9526848 intron Oatp30B + chr2L 9526902 intron Oatp30B + chr2L 9526957 intron Oatp30B + chr2L_15_9525001 chr2L_9525001 RAL-757 225 chr2L 9526866 9526873 chr2L 9526939 9526954 8 82 4.0 5.5 4.8 1.4 88 chr2L 9526866 intron Oatp30B + chr2L 9526910 intron Oatp30B + chr2L 9526954 intron Oatp30B + chr2L_8_9525001 chr2L_9525001 RAL-757 226 chr2L 9543759 9543780 chr2L 9543836 9543857 6 75 3.5 1.0 2.2 1.9 98 chr2L 9543759 intergenic Cpr30B +,CG13113 + chr2L 9543808 intergenic Cpr30B +,CG13113 + chr2L 9543857 intergenic Cpr30B +,CG13113 + chr2L_6_9540001 chr2L_9540001 RAL-757 227 chr2L 9581777 9581786 chr2L 9581845 9581856 4 77 1.0 1.0 1.0 2.0 79 chr2L 9581777 intergenic gcm - chr2L 9581816 intergenic gcm - chr2L 9581856 intergenic gcm - chr2L_4_9580001 chr2L_9580001 RAL-757 228 chr2L 9733568 9733591 chr2L 9733660 9733666 9 90 3.5 9.5 6.5 1.2 98 chr2L 9733568 intron Nckx30C - chr2L 9733617 intron Nckx30C - chr2L 9733666 intron Nckx30C - chr2L_9_9730001 chr2L_9730001 RAL-757 229 chr2L 9837432 9837445 chr2L 9837510 9837522 6 78 4.5 3.5 4.0 1.2 90 chr2L 9837432 intron nAChRalpha6 - chr2L 9837477 intron nAChRalpha6 - chr2L 9837522 intron nAChRalpha6 - chr2L_6_9835001 chr2L_9835001 RAL-757 230 chr2L 9873769 9873794 chr2L 9873857 9873889 15 91 7.0 4.0 5.5 2.3 120 chr2L 9873769 intron nAChRalpha6 - chr2L 9873829 intron nAChRalpha6 - chr2L 9873889 intron nAChRalpha6 - chr2L_15_9870001 chr2L_9870001 RAL-757 231 chr2L 9883160 9883169 chr2L 9883256 9883260 6 95 8.5 5.5 7.0 0.8 100 chr2L 9883160 intron nAChRalpha6 - chr2L 9883210 intron nAChRalpha6 - chr2L 9883260 intron nAChRalpha6 - chr2L_6_9880001 chr2L_9880001 RAL-757 232 chr2L 9944022 9944051 chr2L 9944198 9944204 16 171 13.5 1.0 7.2 2.0 182 chr2L 9944022 intron CG5853 - chr2L 9944113 intron CG5853 - chr2L 9944204 intron CG5853 - chr2L_16_9940001 chr2L_9940001 RAL-757 233 chr2L 9973730 9973751 chr2L 9980844 9980869 HMS-Beagle 9 7117 5.0 6.5 5.8 1.3 7139 chr2L 9973730 intergenic not near genes chr2L 9977300 intergenic not near genes chr2L 9980869 intergenic not near genes chr2L_9_9975001 chr2L_9975001 RAL-757 234 chr2L 9973754 9973759 chr2L 9980843 9980878 HMS-Beagle 10 7108 3.0 6.5 4.8 1.7 7124 chr2L 9973754 intergenic not near genes chr2L 9977316 intergenic not near genes chr2L 9980878 intergenic not near genes chr2L_10_9975001 chr2L_9975001 RAL-757 235 chr2L 9986356 9986380 chr2L 9986446 9986470 9 89 3.0 7.5 5.2 1.5 114 chr2L 9986356 intron bib + chr2L 9986413 intron bib + chr2L 9986470 intron bib + chr2L_9_9985001 chr2L_9985001 RAL-757 236 chr2L 10051729 10051752 chr2L 10051809 10051833 9 75 3.0 3.0 3.0 2.2 104 chr2L 10051729 5` UTR CR44874 + chr2L 10051781 5` UTR CR44874 + chr2L 10051833 5` UTR CR44874 + chr2L_9_10050001 chr2L_10050001 RAL-757 237 chr2L 10095633 10095664 chr2L 10095713 10095723 11 75 3.0 7.0 5.0 1.8 90 chr2L 10095633 intron CG44153 - chr2L 10095678 intron CG44153 - chr2L 10095723 intron CG44153 - chr2L_11_10095001 chr2L_10095001 RAL-757 238 chr2L 10129174 10129183 chr2L 10129266 10129277 4 93 1.5 7.5 4.5 0.7 103 chr2L 10129174 intron CG44153 - chr2L 10129226 intron CG44153 - chr2L 10129277 intron CG44153 - chr2L_4_10125001 chr2L_10125001 RAL-757 239 chr2L 10129187 10129201 chr2L 10129264 10129295 13 84 1.0 6.0 3.5 2.9 108 chr2L 10129187 intron CG44153 - chr2L 10129241 intron CG44153 - chr2L 10129295 intron CG44153 - chr2L_13_10125001 chr2L_10125001 RAL-757 240 chr2L 10156330 10156354 chr2L 10163793 10163799 blood 10 7463 6.5 5.0 5.8 1.5 7469 chr2L 10156330 intron,3` UTR CG44153 -,CG4839 + chr2L 10160064 intron CG44153 - chr2L 10163799 intron CG44153 - chr2L_10_10160001 chr2L_10160001 RAL-757 241 chr2L 10258436 10258437 chr2L 10258521 10258522 4 85 2.0 6.0 4.0 0.8 86 chr2L 10258436 intron Pten - chr2L 10258479 intron Pten - chr2L 10258522 intron Pten - chr2L_4_10255001 chr2L_10255001 RAL-757 242 chr2L 10294188 10294197 chr2L 10294259 10294273 6 75 2.5 3.5 3.0 1.5 85 chr2L 10294188 intron Hand - chr2L 10294230 intron Hand - chr2L 10294273 intron Hand - chr2L_6_10290001 chr2L_10290001 RAL-757 243 chr2L 10474400 10474413 chr2L 10474466 10474494 6 74 3.5 2.0 2.8 1.6 94 chr2L 10474400 intergenic RluA-1 - chr2L 10474447 intergenic RluA-1 - chr2L 10474494 intergenic RluA-1 - chr2L_6_10470001 chr2L_10470001 RAL-757 244 chr2L 10478540 10478543 chr2L 10478608 10478625 4 76 6.5 4.5 5.5 0.6 85 chr2L 10478540 intron RluA-2 + chr2L 10478582 intron RluA-2 + chr2L 10478625 intron RluA-2 + chr2L_4_10475001 chr2L_10475001 RAL-757 245 chr2L 10478545 10478551 chr2L 10478600 10478604 4 68 3.5 3.0 3.2 1.0 59 chr2L 10478545 intron RluA-2 + chr2L 10478574 intron RluA-2 + chr2L 10478604 intron RluA-2 + chr2L_4_10475001 chr2L_10475001 RAL-757 246 chr2L 10514024 10514037 chr2L 10514301 10514325 7 284 7.0 10.5 8.8 0.7 301 chr2L 10514024 intron,intron CG45083 -,Fatp - chr2L 10514174 intron,intron CG45083 -,Fatp - chr2L 10514325 intron,intron CG45083 -,Fatp - chr2L_7_10510001 chr2L_10510001 RAL-757 247 chr2L 10531612 10531645 chr2L 10531704 10531737 6 92 0.5 7.0 3.8 1.2 125 chr2L 10531612 3` UTR Lip4 + chr2L 10531674 3` UTR Lip4 + chr2L 10531737 3` UTR Lip4 + chr2L_6_10530001 chr2L_10530001 RAL-757 248 chr2L 10563930 10563946 chr2L 10564005 10564038 4 86 2.0 4.0 3.0 1.0 108 chr2L 10563930 intron Trim9 + chr2L 10563984 intron Trim9 + chr2L 10564038 intron Trim9 + chr2L_4_10560001 chr2L_10560001 RAL-757 249 chr2L 10592851 10592867 chr2L 10600513 10600529 opus 8 7659 2.5 5.5 4.0 1.6 7678 chr2L 10592851 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600529 intron Trim9 + chr2L_8_10595001 chr2L_10595001 RAL-757 250 chr2L 10592869 10592875 chr2L 10600511 10600534 opus 6 7658 1.5 5.0 3.2 1.4 7665 chr2L 10592869 intron Trim9 + chr2L 10596702 intron Trim9 + chr2L 10600534 intron Trim9 + chr2L_6_10595001 chr2L_10595001 RAL-757 251 chr2L 10612817 10612841 chr2L 10612894 10612918 6 74 4.0 5.5 4.8 1.0 101 chr2L 10612817 intron Trim9 + chr2L 10612868 intron Trim9 + chr2L 10612918 intron Trim9 + chr2L_6_10610001 chr2L_10610001 RAL-757 252 chr2L 10624919 10624947 chr2L 10625009 10625042 11 95 0.5 5.0 2.8 2.9 123 chr2L 10624919 intron Trim9 + chr2L 10624980 intron Trim9 + chr2L 10625042 intron Trim9 + chr2L_11_10620001 chr2L_10620001 RAL-757 253 chr2L 10631209 10631239 chr2L 10631341 10631371 9 128 4.5 0.5 2.5 2.6 162 chr2L 10631209 intron CG7329 - chr2L 10631290 intron CG7329 - chr2L 10631371 intron CG7329 - chr2L_9_10630001 chr2L_10630001 RAL-757 254 chr2L 10683455 10683477 chr2L 10683534 10683556 10 77 4.0 0.5 2.2 3.1 101 chr2L 10683455 3` UTR CG7299 - chr2L 10683506 3` UTR CG7299 - chr2L 10683556 3` UTR CG7299 - chr2L_10_10680001 chr2L_10680001 RAL-757 255 chr2L 10688545 10688567 chr2L 10688620 10688643 5 76 2.5 5.0 3.8 1.0 98 chr2L 10688545 intergenic CG7294 - chr2L 10688594 intergenic CG7294 - chr2L 10688643 intergenic CG7294 - chr2L_5_10685001 chr2L_10685001 RAL-757 256 chr2L 10702663 10702693 chr2L 10703421 10703451 8 755 26.5 29.5 28.0 0.3 788 chr2L 10702663 exon Lip2 - chr2L 10703057 intron Lip2 - chr2L 10703451 intron Lip2 - chr2L_8_10700001 chr2L_10700001 RAL-757 257 chr2L 10723539 10723548 chr2L 10723633 10723642 7 94 2.5 4.5 3.5 1.6 103 chr2L 10723539 intergenic not near genes chr2L 10723590 intergenic not near genes chr2L 10723642 intergenic not near genes chr2L_7_10720001 chr2L_10720001 RAL-757 258 chr2L 10740344 10740351 chr2L 10740421 10740438 4 79 5.0 4.5 4.8 0.7 94 chr2L 10740344 3` UTR CG12299 + chr2L 10740391 3` UTR CG12299 + chr2L 10740438 3` UTR CG12299 + chr2L_4_10740001 chr2L_10740001 RAL-757 259 chr2L 10787999 10788029 chr2L 10788075 10788099 4 71 0.0 0.5 0.2 3.3 100 chr2L 10787999 intron CG31869 - chr2L 10788049 intron CG31869 - chr2L 10788099 intron CG31869 - chr2L_4_10785001 chr2L_10785001 RAL-757 260 chr2L 10803776 10803804 chr2L 10803861 10803890 7 86 0.5 4.0 2.2 2.2 114 chr2L 10803776 intergenic Nos - chr2L 10803833 intergenic Nos - chr2L 10803890 intergenic Nos - chr2L_7_10800001 chr2L_10800001 RAL-757 261 chr2L 10849295 10849298 chr2L 10849455 10849458 4 160 1.5 6.5 4.0 0.8 163 chr2L 10849295 intron porin - chr2L 10849376 intron porin - chr2L 10849458 intron porin - chr2L_4_10845001 chr2L_10845001 RAL-757 262 chr2L 10862852 10862864 chr2L 10864466 10864478 Rt1c 4 1614 6.0 9.5 7.8 0.5 1626 chr2L 10862852 3` UTR CR43807 - chr2L 10863665 intron CR43807 - chr2L 10864478 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-757 263 chr2L 10862866 10862878 chr2L 10864459 10864477 Rt1c 4 1601 3.5 6.5 5.0 0.7 1611 chr2L 10862866 3` UTR CR43807 - chr2L 10863672 intron CR43807 - chr2L 10864477 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-757 264 chr2L 10946954 10946963 chr2L 10956169 10956178 roo 5 9215 6.0 9.0 7.5 0.6 9224 chr2L 10946954 intron dpr2 - chr2L 10951566 intron dpr2 - chr2L 10956178 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-757 265 chr2L 10946967 10946977 chr2L 10956157 10956192 roo 8 9204 5.0 6.5 5.8 1.2 9225 chr2L 10946967 intron dpr2 - chr2L 10951580 intron dpr2 - chr2L 10956192 intron dpr2 - chr2L_8_10950001 chr2L_10950001 RAL-757 266 chr2L 11146499 11146512 chr2L 11146577 11146580 5 74 8.0 0.0 4.0 1.0 81 chr2L 11146499 intron Gyc32E - chr2L 11146540 intron Gyc32E - chr2L 11146580 intron Gyc32E - chr2L_5_11145001 chr2L_11145001 RAL-757 267 chr2L 11195145 11195154 chr2L 11195209 11195237 6 74 1.5 0.0 0.8 3.3 92 chr2L 11195145 intron Ca-beta - chr2L 11195191 intron Ca-beta - chr2L 11195237 intron Ca-beta - chr2L_6_11195001 chr2L_11195001 RAL-757 268 chr2L 11224055 11224091 chr2L 11224166 11224199 21 110 3.5 3.0 3.2 5.0 144 chr2L 11224055 intron ab + chr2L 11224127 intron ab + chr2L 11224199 intron ab + chr2L_21_11220001 chr2L_11220001 RAL-757 269 chr2L 11292399 11292402 chr2L 11292470 11292484 4 76 8.0 13.5 10.8 0.3 85 chr2L 11292399 intergenic not near genes chr2L 11292442 intergenic not near genes chr2L 11292484 intergenic not near genes chr2L_4_11290001 chr2L_11290001 RAL-757 270 chr2L 11389029 11389063 chr2L 11389119 11389143 11 88 1.0 3.0 2.0 3.7 114 chr2L 11389029 3` UTR CR43681 - chr2L 11389086 3` UTR CR43681 - chr2L 11389143 3` UTR CR43681 - chr2L_11_11385001 chr2L_11385001 RAL-757 271 chr2L 11540600 11540603 chr2L 11547996 11548004 Tabor 4 7398 8.0 8.5 8.2 0.4 7404 chr2L 11540600 intergenic not near genes chr2L 11544302 intergenic not near genes chr2L 11548004 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-757 272 chr2L 11540607 11540614 chr2L 11547990 11548016 Tabor 4 7394 6.5 7.5 7.0 0.5 7409 chr2L 11540607 intergenic not near genes chr2L 11544312 intergenic not near genes chr2L 11548016 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-757 273 chr2L 11563635 11563669 chr2L 11568839 11568873 copia 16 5203 5.0 7.5 6.2 2.2 5238 chr2L 11563635 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568873 intergenic not near genes chr2L_16_11565001 chr2L_11565001 RAL-757 274 chr2L 11614051 11614085 chr2L 11615545 11615554 hopper2 5 1488 1.0 1.5 1.2 2.3 1503 chr2L 11614051 intron kek2 + chr2L 11614802 intron kek2 + chr2L 11615554 intron kek2 + chr2L_5_11610001 chr2L_11610001 RAL-757 275 chr2L 11633168 11633189 chr2L 11633270 11633291 4 102 4.5 4.0 4.2 0.8 123 chr2L 11633168 intergenic not near genes chr2L 11633230 intergenic not near genes chr2L 11633291 intergenic not near genes chr2L_4_11630001 chr2L_11630001 RAL-757 276 chr2L 11672138 11672166 chr2L 11672245 11672273 11 106 4.0 5.0 4.5 2.0 135 chr2L 11672138 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672273 intergenic not near genes chr2L_11_11670001 chr2L_11670001 RAL-757 277 chr2L 11713505 11713528 chr2L 11720973 11720994 blood 7 7466 8.5 7.0 7.8 0.8 7489 chr2L 11713505 intergenic not near genes chr2L 11717250 intergenic not near genes chr2L 11720994 intergenic CR44143 + chr2L_7_11715001 chr2L_11715001 RAL-757 278 chr2L 11729496 11729524 chr2L 11729580 11729612 12 86 2.5 6.5 4.5 2.2 116 chr2L 11729496 intergenic not near genes chr2L 11729554 intergenic not near genes chr2L 11729612 intergenic not near genes chr2L_12_11725001 chr2L_11725001 RAL-757 279 chr2L 11770604 11770631 chr2L 11770691 11770716 10 86 6.5 5.0 5.8 1.5 112 chr2L 11770604 intergenic not near genes chr2L 11770660 intergenic not near genes chr2L 11770716 intergenic not near genes chr2L_10_11770001 chr2L_11770001 RAL-757 280 chr2L 11841370 11841397 chr2L 11841446 11841474 8 76 3.0 1.5 2.2 2.5 104 chr2L 11841370 intron Pde1c - chr2L 11841422 intron Pde1c - chr2L 11841474 intron Pde1c - chr2L_8_11840001 chr2L_11840001 RAL-757 281 chr2L 11854705 11854723 chr2L 11854880 11854892 6 174 3.5 7.5 5.5 0.9 187 chr2L 11854705 intron Pde1c - chr2L 11854798 intron Pde1c - chr2L 11854892 intron Pde1c - chr2L_6_11850001 chr2L_11850001 RAL-757 282 chr2L 11896867 11897130 chr2L 11900043 11900307 X-element 4 3178 0.0 0.0 0.0 4.0 3440 chr2L 11896867 intron Pde1c - chr2L 11898587 intron Pde1c - chr2L 11900307 intron Pde1c - chr2L_4_11895001 chr2L_11895001 RAL-757 283 chr2L 12031388 12031418 chr2L 12031469 12031499 12 80 5.0 5.5 5.2 1.9 111 chr2L 12031388 intron dmGlut + chr2L 12031444 intron dmGlut + chr2L 12031499 intron dmGlut + chr2L_12_12030001 chr2L_12030001 RAL-757 284 chr2L 12067328 12067357 chr2L 12074380 12074409 297 15 7050 6.5 7.0 6.8 1.9 7081 chr2L 12067328 intergenic not near genes chr2L 12070868 intergenic not near genes chr2L 12074409 intergenic not near genes chr2L_15_12070001 chr2L_12070001 RAL-757 285 chr2L 12112035 12112046 chr2L 12112146 12112154 4 110 0.0 8.5 4.2 0.8 119 chr2L 12112035 3` UTR Phae2 + chr2L 12112094 3` UTR Phae2 + chr2L 12112154 3` UTR Phae2 + chr2L_4_12110001 chr2L_12110001 RAL-757 286 chr2L 12132729 12132751 chr2L 12132812 12132836 15 84 4.5 3.0 3.8 3.1 107 chr2L 12132729 intron rho-6 - chr2L 12132782 intron rho-6 - chr2L 12132836 intron rho-6 - chr2L_15_12130001 chr2L_12130001 RAL-757 287 chr2L 12147458 12147467 chr2L 12150338 12150355 11 2880 28.0 42.0 35.0 0.3 2897 chr2L 12147458 intron CG31760 + chr2L 12148906 intron CG31760 + chr2L 12150355 intron CG31760 + chr2L_11_12145001 chr2L_12145001 RAL-757 288 chr2L 12157612 12157634 chr2L 12157689 12157710 11 75 3.0 4.0 3.5 2.4 98 chr2L 12157612 intron CG31760 + chr2L 12157661 intron CG31760 + chr2L 12157710 intron CG31760 + chr2L_11_12155001 chr2L_12155001 RAL-757 289 chr2L 12169557 12169574 chr2L 12169637 12169654 9 80 5.0 2.5 3.8 1.9 97 chr2L 12169557 3` UTR CG31760 + chr2L 12169606 3` UTR CG31760 + chr2L 12169654 3` UTR CG31760 + chr2L_9_12165001 chr2L_12165001 RAL-757 290 chr2L 12188285 12188288 chr2L 12188842 12188844 4 567 4.5 3.0 3.8 0.8 559 chr2L 12188285 intron aret + chr2L 12188564 intron aret + chr2L 12188844 intron aret + chr2L_4_12185001 chr2L_12185001 RAL-757 291 chr2L 12234031 12234067 chr2L 12234126 12234162 9 92 3.0 6.5 4.8 1.6 131 chr2L 12234031 intron aret + chr2L 12234096 intron aret + chr2L 12234162 intron aret + chr2L_9_12230001 chr2L_12230001 RAL-757 292 chr2L 12254027 12254056 chr2L 12254119 12254138 13 91 5.0 0.0 2.5 3.7 111 chr2L 12254027 intron aret + chr2L 12254082 intron aret + chr2L 12254138 intron aret + chr2L_13_12250001 chr2L_12250001 RAL-757 293 chr2L 12272164 12272172 chr2L 12272240 12272248 8 75 2.5 3.0 2.8 2.1 84 chr2L 12272164 intron aret + chr2L 12272206 intron aret + chr2L 12272248 intron aret + chr2L_8_12270001 chr2L_12270001 RAL-757 294 chr2L 12272173 12272195 chr2L 12272239 12272271 11 72 2.5 3.0 2.8 2.9 98 chr2L 12272173 intron aret + chr2L 12272222 intron aret + chr2L 12272271 intron aret + chr2L_11_12270001 chr2L_12270001 RAL-757 295 chr2L 12411019 12411037 chr2L 12411085 12411116 9 75 3.5 4.0 3.8 1.9 97 chr2L 12411019 intron vir-1 - chr2L 12411068 intron vir-1 - chr2L 12411116 intron vir-1 - chr2L_9_12410001 chr2L_12410001 RAL-757 296 chr2L 12487886 12487917 chr2L 12487967 12487988 17 78 7.0 6.0 6.5 2.3 102 chr2L 12487886 intron bun - chr2L 12487937 intron bun - chr2L 12487988 intron bun - chr2L_17_12485001 chr2L_12485001 RAL-757 297 chr2L 12547490 12547499 chr2L 12547554 12547577 7 74 0.0 1.5 0.8 3.9 87 chr2L 12547490 intergenic not near genes chr2L 12547534 intergenic not near genes chr2L 12547577 intergenic not near genes chr2L_7_12545001 chr2L_12545001 RAL-757 298 chr2L 12558326 12558353 chr2L 12565449 12565482 HMS-Beagle 13 7125 3.0 5.5 4.2 2.5 7156 chr2L 12558326 intergenic not near genes chr2L 12561904 intergenic not near genes chr2L 12565482 intergenic not near genes chr2L_13_12560001 chr2L_12560001 RAL-757 299 chr2L 12643171 12643188 chr2L 12643247 12643262 7 76 2.0 2.0 2.0 2.3 91 chr2L 12643171 intron Ref2 - chr2L 12643216 intron Ref2 - chr2L 12643262 intron Ref2 - chr2L_7_12640001 chr2L_12640001 RAL-757 300 chr2L 12731055 12731085 chr2L 12735822 12735849 F-element 10 4767 5.0 5.0 5.0 1.7 4794 chr2L 12731055 intron MRP + chr2L 12733452 intron MRP + chr2L 12735849 intron MRP + chr2L_10_12730001 chr2L_12730001 RAL-757 301 chr2L 12739190 12739205 chr2L 12743968 12743986 Doc 8 4780 2.5 11.0 6.8 1.0 4796 chr2L 12739190 intron MRP + chr2L 12741588 intron MRP + chr2L 12743986 exon MRP + chr2L_8_12740001 chr2L_12740001 RAL-757 302 chr2L 12751309 12751340 chr2L 12751392 12751412 18 79 2.5 2.5 2.5 5.1 103 chr2L 12751309 intergenic not near genes chr2L 12751360 intergenic not near genes chr2L 12751412 intergenic not near genes chr2L_18_12750001 chr2L_12750001 RAL-757 303 chr2L 12760246 12760257 chr2L 12760342 12760343 6 94 6.5 3.0 4.8 1.0 97 chr2L 12760246 intergenic CG15483 - chr2L 12760294 intergenic CG15483 - chr2L 12760343 intergenic CG15483 - chr2L_6_12760001 chr2L_12760001 RAL-757 304 chr2L 12781799 12781808 chr2L 12789249 12789256 Quasimodo 4 7450 12.0 6.5 9.2 0.4 7457 chr2L 12781799 intergenic not near genes chr2L 12785528 intergenic not near genes chr2L 12789256 intergenic not near genes chr2L_4_12785001 chr2L_12785001 RAL-757 305 chr2L 12791608 12791637 chr2L 12795276 12795307 F-element 9 3669 3.0 6.5 4.8 1.6 3699 chr2L 12791608 intergenic not near genes chr2L 12793458 intergenic not near genes chr2L 12795307 intergenic not near genes chr2L_9_12790001 chr2L_12790001 RAL-757 306 chr2L 12848447 12848460 chr2L 12848535 12848536 4 85 0.5 9.0 4.8 0.7 89 chr2L 12848447 intergenic not near genes chr2L 12848492 intergenic not near genes chr2L 12848536 intergenic not near genes chr2L_4_12845001 chr2L_12845001 RAL-757 307 chr2L 12848464 12848466 chr2L 12848526 12848549 5 76 0.0 6.0 3.0 1.2 85 chr2L 12848464 intergenic not near genes chr2L 12848506 intergenic not near genes chr2L 12848549 intergenic not near genes chr2L_5_12845001 chr2L_12845001 RAL-757 308 chr2L 12861700 12861730 chr2L 12863160 12863173 hobo 13 1458 5.0 5.5 5.2 2.1 1473 chr2L 12861700 intergenic not near genes chr2L 12862436 intergenic not near genes chr2L 12863173 intergenic not near genes chr2L_13_12860001 chr2L_12860001 RAL-757 309 chr2L 12933849 12933883 chr2L 12941316 12941350 blood 4 7465 6.5 3.0 4.8 0.7 7501 chr2L 12933849 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941350 intergenic not near genes chr2L_4_12935001 chr2L_12935001 RAL-757 310 chr2L 12965211 12965218 chr2L 12965263 12965281 5 66 2.0 3.5 2.8 1.3 70 chr2L 12965211 intergenic not near genes chr2L 12965246 intergenic not near genes chr2L 12965281 intergenic not near genes chr2L_5_12965001 chr2L_12965001 RAL-757 311 chr2L 12989572 12989606 chr2L 12989653 12989687 16 80 2.5 4.5 3.5 3.6 115 chr2L 12989572 intergenic not near genes chr2L 12989630 intergenic not near genes chr2L 12989687 intergenic not near genes chr2L_16_12985001 chr2L_12985001 RAL-757 312 chr2L 13154115 13154123 chr2L 13154193 13154201 6 78 3.5 4.0 3.8 1.2 86 chr2L 13154115 intergenic not near genes chr2L 13154158 intergenic not near genes chr2L 13154201 intergenic not near genes chr2L_6_13150001 chr2L_13150001 RAL-757 313 chr2L 13204321 13204343 chr2L 13204415 13204416 7 87 5.5 3.5 4.5 1.3 95 chr2L 13204321 intron Pect + chr2L 13204368 intron Pect + chr2L 13204416 intron Pect + chr2L_7_13200001 chr2L_13200001 RAL-757 314 chr2L 13266379 13266412 chr2L 13266467 13266500 29 85 3.5 8.0 5.8 4.3 121 chr2L 13266379 intron CG44085 + chr2L 13266440 intron CG44085 + chr2L 13266500 intron CG44085 + chr2L_29_13265001 chr2L_13265001 RAL-757 315 chr2L 13346039 13346064 chr2L 13346122 13346131 5 79 9.0 4.0 6.5 0.7 92 chr2L 13346039 intergenic not near genes chr2L 13346085 intergenic not near genes chr2L 13346131 intergenic not near genes chr2L_5_13345001 chr2L_13345001 RAL-757 316 chr2L 13351819 13351850 chr2L 13351904 13351936 22 84 3.0 5.5 4.2 4.2 117 chr2L 13351819 exon CG9395 - chr2L 13351878 intron CG9395 - chr2L 13351936 exon CG9395 - chr2L_22_13350001 chr2L_13350001 RAL-757 317 chr2L 13405652 13405680 chr2L 13410443 13410460 Doc 11 4791 4.5 3.5 4.0 2.2 4808 chr2L 13405652 exon CG7110 + chr2L 13408056 intron CG7110 + chr2L 13410460 intron CG7110 + chr2L_11_13405001 chr2L_13405001 RAL-757 318 chr2L 13449464 13449482 chr2L 13456900 13456918 Quasimodo 4 7434 3.0 5.0 4.0 0.8 7454 chr2L 13449464 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453191 intron CG42784 + chr2L 13456918 intron CG42784 + chr2L_4_13450001 chr2L_13450001 RAL-757 319 chr2L 13449483 13449496 chr2L 13456896 13456932 Quasimodo 4 7430 1.5 4.0 2.8 1.1 7449 chr2L 13449483 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453208 intron CG42784 + chr2L 13456932 intron CG42784 + chr2L_4_13450001 chr2L_13450001 RAL-757 320 chr2L 13481449 13481477 chr2L 13482056 13482073 jockey 19 603 5.0 4.5 4.8 3.3 624 chr2L 13481449 intron CG42784 + chr2L 13481761 intron CG42784 + chr2L 13482073 intron CG42784 + chr2L_19_13480001 chr2L_13480001 RAL-757 321 chr2L 13501913 13501935 chr2L 13502115 13502130 12 201 4.5 5.5 5.0 2.0 217 chr2L 13501913 3` UTR B4 - chr2L 13502022 3` UTR B4 - chr2L 13502130 3` UTR B4 - chr2L_12_13500001 chr2L_13500001 RAL-757 322 chr2L 13522284 13522288 chr2L 13527590 13527593 Transpac 4 5306 5.5 6.5 6.0 0.6 5309 chr2L 13522284 intron B4 - chr2L 13524938 intron B4 - chr2L 13527593 intron B4 - chr2L_4_13520001 chr2L_13520001 RAL-757 323 chr2L 13590749 13590765 chr2L 13590857 13590872 7 107 1.5 10.5 6.0 1.0 123 chr2L 13590749 intron kuz + chr2L 13590810 intron kuz + chr2L 13590872 intron kuz + chr2L_7_13590001 chr2L_13590001 RAL-757 324 chr2L 13631760 13631791 chr2L 13631901 13631927 12 140 5.5 6.0 5.8 1.8 167 chr2L 13631760 intron kuz + chr2L 13631844 intron kuz + chr2L 13631927 intron kuz + chr2L_12_13630001 chr2L_13630001 RAL-757 325 chr2L 13670031 13670056 chr2L 13670113 13670140 13 83 4.5 7.0 5.8 1.9 109 chr2L 13670031 intron CG18507 + chr2L 13670086 intron CG18507 + chr2L 13670140 intron CG18507 + chr2L_13_13670001 chr2L_13670001 RAL-757 326 chr2L 13693008 13693031 chr2L 13693084 13693106 4 76 2.5 8.5 5.5 0.6 98 chr2L 13693008 intron CG31814 - chr2L 13693057 intron CG31814 - chr2L 13693106 intron CG31814 - chr2L_4_13690001 chr2L_13690001 RAL-757 327 chr2L 13713560 13713572 chr2L 13713636 13713648 6 74 4.0 8.0 6.0 0.9 88 chr2L 13713560 intron CG31814 - chr2L 13713604 intron CG31814 - chr2L 13713648 intron CG31814 - chr2L_6_13710001 chr2L_13710001 RAL-757 328 chr2L 13720243 13720268 chr2L 13720326 13720347 12 85 0.0 0.0 0.0 12.0 104 chr2L 13720243 intergenic not near genes chr2L 13720295 intergenic not near genes chr2L 13720347 intergenic not near genes chr2L_12_13720001 chr2L_13720001 RAL-757 329 chr2L 13794698 13794703 chr2L 13794797 13794797 4 98 9.5 6.5 8.0 0.4 99 chr2L 13794698 intron Sec71 + chr2L 13794748 intron Sec71 + chr2L 13794797 intron Sec71 + chr2L_4_13790001 chr2L_13790001 RAL-757 330 chr2L 13794704 13794726 chr2L 13794796 13794826 9 96 4.5 6.5 5.5 1.4 122 chr2L 13794704 intron Sec71 + chr2L 13794765 intron Sec71 + chr2L 13794826 intron Sec71 + chr2L_9_13790001 chr2L_13790001 RAL-757 331 chr2L 13800176 13800203 chr2L 13800280 13800307 17 103 5.5 7.0 6.2 2.4 131 chr2L 13800176 intergenic not near genes chr2L 13800242 intergenic not near genes chr2L 13800307 intergenic not near genes chr2L_17_13800001 chr2L_13800001 RAL-757 332 chr2L 13853086 13853111 chr2L 13862236 13862258 roo 6 9150 8.0 7.0 7.5 0.7 9172 chr2L 13853086 intron CenG1A + chr2L 13857672 intron CenG1A + chr2L 13862258 intron CenG1A + chr2L_6_13855001 chr2L_13855001 RAL-757 333 chr2L 13904576 13904609 chr2L 13904657 13904674 18 76 2.0 1.5 1.8 6.4 98 chr2L 13904576 intergenic Smg5 - chr2L 13904625 intergenic Smg5 - chr2L 13904674 intergenic Smg5 - chr2L_18_13900001 chr2L_13900001 RAL-757 334 chr2L 13944409 13944431 chr2L 13944529 13944551 11 119 0.0 4.0 2.0 3.7 142 chr2L 13944409 intron Ance-3 + chr2L 13944480 intron Ance-3 + chr2L 13944551 intron Ance-3 + chr2L_11_13940001 chr2L_13940001 RAL-757 335 chr2L 13981523 13981550 chr2L 13981608 13981640 10 87 3.5 5.0 4.2 1.9 117 chr2L 13981523 exon NimC2 + chr2L 13981582 intron NimC2 + chr2L 13981640 intron NimC2 + chr2L_10_13980001 chr2L_13980001 RAL-757 336 chr2L 14046187 14046211 chr2L 14046270 14046283 8 80 7.5 1.5 4.5 1.5 96 chr2L 14046187 intron nAChRalpha5 + chr2L 14046235 intron nAChRalpha5 + chr2L 14046283 intron nAChRalpha5 + chr2L_8_14045001 chr2L_14045001 RAL-757 337 chr2L 14109514 14109541 chr2L 14109601 14109632 11 88 4.0 6.5 5.2 1.8 118 chr2L 14109514 intergenic CG15293 -,CG31769 - chr2L 14109573 intergenic CG31769 -,CG15293 - chr2L 14109632 3` UTR CG31769 - chr2L_11_14105001 chr2L_14105001 RAL-757 338 chr2L 14118662 14118691 chr2L 14118761 14118782 14 94 4.5 7.5 6.0 2.0 120 chr2L 14118662 intergenic not near genes chr2L 14118722 intergenic not near genes chr2L 14118782 intergenic not near genes chr2L_14_14115001 chr2L_14115001 RAL-757 339 chr2L 14160695 14160719 chr2L 14160771 14160802 10 79 2.0 3.0 2.5 2.9 107 chr2L 14160695 intergenic CG17341 +,CG43332 - chr2L 14160748 intergenic CG17341 +,CG43332 - chr2L 14160802 intergenic CG17341 +,CG43332 - chr2L_10_14160001 chr2L_14160001 RAL-757 340 chr2L 14246285 14246306 chr2L 14246363 14246384 10 76 0.5 0.0 0.2 8.3 99 chr2L 14246285 intergenic not near genes chr2L 14246334 intergenic not near genes chr2L 14246384 intergenic not near genes chr2L_10_14245001 chr2L_14245001 RAL-757 341 chr2L 14276998 14277017 chr2L 14277403 14277421 12 403 6.0 0.0 3.0 3.0 423 chr2L 14276998 intron,intron wb +,CG32971 + chr2L 14277210 intron,intron wb +,CG32971 + chr2L 14277421 intron,5` UTR wb +,CG32971 + chr2L_12_14275001 chr2L_14275001 RAL-757 342 chr2L 14278549 14278549 chr2L 14278626 14278632 4 81 3.5 3.5 3.5 0.9 83 chr2L 14278549 exon wb + chr2L 14278590 intron wb + chr2L 14278632 intron wb + chr2L_4_14275001 chr2L_14275001 RAL-757 343 chr2L 14278555 14278563 chr2L 14278622 14278646 4 76 3.0 3.0 3.0 1.0 91 chr2L 14278555 exon wb + chr2L 14278600 intron wb + chr2L 14278646 intron wb + chr2L_4_14275001 chr2L_14275001 RAL-757 344 chr2L 14301760 14301788 chr2L 14301844 14301860 16 81 7.0 0.5 3.8 3.3 100 chr2L 14301760 intron wb + chr2L 14301810 intron wb + chr2L 14301860 intron wb + chr2L_16_14300001 chr2L_14300001 RAL-757 345 chr2L 14309794 14309826 chr2L 14313787 14313815 12 3992 41.5 42.5 42.0 0.3 4021 chr2L 14309794 intron wb + chr2L 14311804 intron wb + chr2L 14313815 intron wb + chr2L_12_14310001 chr2L_14310001 RAL-757 346 chr2L 14340553 14340561 chr2L 14340621 14340637 5 74 0.0 8.5 4.2 1.0 84 chr2L 14340553 intron CG33090 + chr2L 14340595 intron CG33090 + chr2L 14340637 intron CG33090 + chr2L_5_14340001 chr2L_14340001 RAL-757 347 chr2L 14378648 14378681 chr2L 14378727 14378757 18 75 6.5 1.0 3.8 3.8 109 chr2L 14378648 3` UTR ppk - chr2L 14378702 3` UTR ppk - chr2L 14378757 3` UTR ppk - chr2L_18_14375001 chr2L_14375001 RAL-757 348 chr2L 14410043 14410056 chr2L 14410137 14410151 5 94 3.5 7.5 5.5 0.8 108 chr2L 14410043 5` UTR CR44733 + chr2L 14410097 intergenic CR44733 + chr2L 14410151 intergenic CR44733 + chr2L_5_14410001 chr2L_14410001 RAL-757 349 chr2L 14429434 14429453 chr2L 14429515 14429534 11 79 7.0 6.5 6.8 1.4 100 chr2L 14429434 3` UTR CR44732 - chr2L 14429484 3` UTR CR44732 - chr2L 14429534 3` UTR CR44732 - chr2L_11_14425001 chr2L_14425001 RAL-757 350 chr2L 14462729 14462734 chr2L 14462816 14462821 4 87 5.0 0.0 2.5 1.1 92 chr2L 14462729 intergenic not near genes chr2L 14462775 intergenic not near genes chr2L 14462821 intergenic not near genes chr2L_4_14460001 chr2L_14460001 RAL-757 351 chr2L 14564197 14564209 chr2L 14564272 14564284 4 73 5.5 1.5 3.5 0.9 87 chr2L 14564197 intergenic CG3473 - chr2L 14564240 intergenic not near genes chr2L 14564284 intergenic not near genes chr2L_4_14560001 chr2L_14560001 RAL-757 352 chr2L 14564218 14564231 chr2L 14564271 14564271 11 58 1.0 1.5 1.2 5.0 53 chr2L 14564218 intergenic CG3473 - chr2L 14564244 intergenic not near genes chr2L 14564271 intergenic not near genes chr2L_11_14560001 chr2L_14560001 RAL-757 353 chr2L 14574980 14575013 chr2L 14575100 14575134 28 120 4.5 4.0 4.2 5.4 154 chr2L 14574980 intergenic not near genes chr2L 14575057 intergenic not near genes chr2L 14575134 intergenic not near genes chr2L_28_14575001 chr2L_14575001 RAL-757 354 chr2L 14588384 14588420 chr2L 14588538 14588553 19 148 4.0 6.0 5.0 3.2 169 chr2L 14588384 intergenic CG42680 - chr2L 14588468 intergenic CG42680 - chr2L 14588553 intergenic CG42680 - chr2L_19_14585001 chr2L_14585001 RAL-757 355 chr2L 14642579 14642602 chr2L 14651742 14651765 roo 20 9161 1.0 8.5 4.8 3.4 9186 chr2L 14642579 intron osp - chr2L 14647172 intron osp - chr2L 14651765 intron osp - chr2L_20_14645001 chr2L_14645001 RAL-757 356 chr2L 14707211 14707234 chr2L 14707330 14707353 8 119 5.5 3.5 4.5 1.5 142 chr2L 14707211 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707353 intergenic not near genes chr2L_8_14705001 chr2L_14705001 RAL-757 357 chr2L 14778810 14778839 chr2L 14779098 14779127 8 285 2.0 5.0 3.5 1.8 317 chr2L 14778810 intergenic not near genes chr2L 14778968 intergenic not near genes chr2L 14779127 intergenic not near genes chr2L_8_14775001 chr2L_14775001 RAL-757 358 chr2L 14803882 14803908 chr2L 14809085 14809111 copia 8 5201 8.0 7.5 7.8 0.9 5229 chr2L 14803882 intergenic not near genes chr2L 14806496 intergenic not near genes chr2L 14809111 intergenic not near genes chr2L_8_14805001 chr2L_14805001 RAL-757 359 chr2L 14839752 14839779 chr2L 14839824 14839855 17 72 7.5 2.0 4.8 2.9 103 chr2L 14839752 intergenic not near genes chr2L 14839804 intergenic not near genes chr2L 14839855 intergenic not near genes chr2L_17_14835001 chr2L_14835001 RAL-757 360 chr2L 14840977 14841010 chr2L 14841064 14841097 10 87 1.5 4.0 2.8 2.6 120 chr2L 14840977 3` UTR CR43805 - chr2L 14841037 3` UTR CR43805 - chr2L 14841097 3` UTR CR43805 - chr2L_10_14840001 chr2L_14840001 RAL-757 361 chr2L 14885416 14885426 chr2L 14885576 14885587 4 160 6.5 1.0 3.8 0.8 171 chr2L 14885416 intergenic CR45302 + chr2L 14885502 intergenic CR45302 + chr2L 14885587 intergenic CR45302 + chr2L_4_14885001 chr2L_14885001 RAL-757 362 chr2L 14889953 14889986 chr2L 14890378 14890411 jockey 11 424 3.0 3.0 3.0 2.8 458 chr2L 14889953 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890411 intergenic not near genes chr2L_11_14890001 chr2L_14890001 RAL-757 363 chr2L 14905743 14905761 chr2L 14905840 14905858 11 96 3.0 4.5 3.8 2.3 115 chr2L 14905743 intergenic not near genes chr2L 14905800 intergenic not near genes chr2L 14905858 intergenic not near genes chr2L_11_14905001 chr2L_14905001 RAL-757 364 chr2L 14984380 14984404 chr2L 14991980 14992000 opus 11 7596 5.5 4.0 4.8 1.9 7620 chr2L 14984380 intron mol - chr2L 14988190 intron mol - chr2L 14992000 intron mol - chr2L_11_14985001 chr2L_14985001 RAL-757 365 chr2L 15003546 15003567 chr2L 15003630 15003651 9 81 6.5 7.0 6.8 1.2 105 chr2L 15003546 intergenic not near genes chr2L 15003598 intergenic not near genes chr2L 15003651 intergenic not near genes chr2L_9_15000001 chr2L_15000001 RAL-757 366 chr2L 15021439 15021468 chr2L 15021515 15021544 14 75 5.5 4.0 4.8 2.4 105 chr2L 15021439 intron GABA-B-R1 + chr2L 15021492 intron GABA-B-R1 + chr2L 15021544 intron GABA-B-R1 + chr2L_14_15020001 chr2L_15020001 RAL-757 367 chr2L 15026019 15026049 chr2L 15026100 15026130 13 80 5.0 7.0 6.0 1.9 111 chr2L 15026019 exon GABA-B-R1 + chr2L 15026074 intron GABA-B-R1 + chr2L 15026130 intron GABA-B-R1 + chr2L_13_15025001 chr2L_15025001 RAL-757 368 chr2L 15044712 15044729 chr2L 15044787 15044793 7 71 7.5 2.0 4.8 1.2 81 chr2L 15044712 intergenic ck - chr2L 15044752 intergenic ck - chr2L 15044793 intergenic ck - chr2L_7_15040001 chr2L_15040001 RAL-757 369 chr2L 15044732 15044740 chr2L 15044785 15044806 7 65 4.5 2.0 3.2 1.7 74 chr2L 15044732 intergenic ck - chr2L 15044769 intergenic ck - chr2L 15044806 intergenic ck - chr2L_7_15040001 chr2L_15040001 RAL-757 370 chr2L 15103856 15103873 chr2L 15103953 15103970 8 96 7.0 9.0 8.0 0.9 114 chr2L 15103856 intergenic not near genes chr2L 15103913 intergenic not near genes chr2L 15103970 intergenic not near genes chr2L_8_15100001 chr2L_15100001 RAL-757 371 chr2L 15161255 15161269 chr2L 15161391 15161405 6 134 3.0 3.5 3.2 1.4 150 chr2L 15161255 intergenic CR44770 + chr2L 15161330 intergenic CR44770 + chr2L 15161405 intergenic CR44770 +,CG4168 - chr2L_6_15160001 chr2L_15160001 RAL-757 372 chr2L 15226369 15226395 chr2L 15226443 15226443 6 59 2.0 4.0 3.0 1.5 74 chr2L 15226369 intergenic not near genes chr2L 15226406 intergenic not near genes chr2L 15226443 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-757 373 chr2L 15239484 15239504 chr2L 15239564 15239584 6 80 5.0 5.0 5.0 1.0 100 chr2L 15239484 intron ZnT35C - chr2L 15239534 intron ZnT35C - chr2L 15239584 intron ZnT35C - chr2L_6_15235001 chr2L_15235001 RAL-757 374 chr2L 15239506 15239515 chr2L 15239561 15239594 5 72 2.5 4.0 3.2 1.2 88 chr2L 15239506 intron ZnT35C - chr2L 15239550 intron ZnT35C - chr2L 15239594 intron ZnT35C - chr2L_5_15235001 chr2L_15235001 RAL-757 375 chr2L 15309352 15309382 chr2L 15309455 15309458 14 100 3.5 4.5 4.0 2.8 106 chr2L 15309352 intergenic not near genes chr2L 15309405 intergenic not near genes chr2L 15309458 intergenic not near genes chr2L_14_15305001 chr2L_15305001 RAL-757 376 chr2L 15363655 15363674 chr2L 15363735 15363752 7 80 1.0 5.0 3.0 1.8 97 chr2L 15363655 intergenic not near genes chr2L 15363704 intergenic not near genes chr2L 15363752 intergenic not near genes chr2L_7_15360001 chr2L_15360001 RAL-757 377 chr2L 15394178 15394200 chr2L 15394268 15394284 6 89 1.5 0.0 0.8 3.3 106 chr2L 15394178 intergenic not near genes chr2L 15394231 intergenic not near genes chr2L 15394284 intergenic not near genes chr2L_6_15390001 chr2L_15390001 RAL-757 378 chr2L 15401253 15401290 chr2L 15401331 15401362 18 72 4.5 4.0 4.2 3.5 109 chr2L 15401253 intergenic not near genes chr2L 15401308 intergenic not near genes chr2L 15401362 intergenic not near genes chr2L_18_15400001 chr2L_15400001 RAL-757 379 chr2L 15446049 15446083 chr2L 15453518 15453529 blood 11 7465 3.0 2.5 2.8 2.9 7480 chr2L 15446049 intergenic not near genes chr2L 15449789 intergenic not near genes chr2L 15453529 intergenic not near genes chr2L_11_15445001 chr2L_15445001 RAL-757 380 chr2L 15482593 15482602 chr2L 15482718 15482737 6 133 5.5 1.5 3.5 1.3 144 chr2L 15482593 intergenic not near genes chr2L 15482665 intergenic not near genes chr2L 15482737 intergenic not near genes chr2L_6_15480001 chr2L_15480001 RAL-757 381 chr2L 15514319 15514330 chr2L 15514403 15514408 5 83 11.0 7.0 9.0 0.5 89 chr2L 15514319 intergenic not near genes chr2L 15514364 intergenic not near genes chr2L 15514408 intergenic not near genes chr2L_5_15510001 chr2L_15510001 RAL-757 382 chr2L 15556551 15556577 chr2L 15556647 15556679 12 100 4.5 3.5 4.0 2.4 128 chr2L 15556551 intron kek3 + chr2L 15556615 intron kek3 + chr2L 15556679 intron kek3 + chr2L_12_15555001 chr2L_15555001 RAL-757 383 chr2L 15586408 15586426 chr2L 15593460 15593467 297 6 7048 9.0 0.0 4.5 1.1 7059 chr2L 15586408 intergenic not near genes chr2L 15589938 intergenic not near genes chr2L 15593467 intergenic not near genes chr2L_6_15585001 chr2L_15585001 RAL-757 384 chr2L 15732518 15732539 chr2L 15732608 15732620 10 92 3.5 2.5 3.0 2.5 102 chr2L 15732518 intron CycE - chr2L 15732569 intron CycE - chr2L 15732620 intron CycE - chr2L_10_15730001 chr2L_15730001 RAL-757 385 chr2L 15734294 15734325 chr2L 15734372 15734403 21 76 1.0 6.5 3.8 4.4 109 chr2L 15734294 intron CycE - chr2L 15734348 intron CycE - chr2L 15734403 intron CycE - chr2L_21_15730001 chr2L_15730001 RAL-757 386 chr2L 15740679 15740694 chr2L 15740767 15740780 9 87 1.5 2.5 2.0 3.0 101 chr2L 15740679 intron CycE - chr2L 15740730 intron CycE - chr2L 15740780 exon CycE - chr2L_9_15740001 chr2L_15740001 RAL-757 387 chr2L 15740695 15740706 chr2L 15740765 15740794 8 81 1.5 2.5 2.0 2.7 99 chr2L 15740695 intron CycE - chr2L 15740744 intron CycE - chr2L 15740794 5` UTR CycE - chr2L_8_15740001 chr2L_15740001 RAL-757 388 chr2L 15761098 15761105 chr2L 15761178 15761185 5 80 0.0 4.0 2.0 1.7 87 chr2L 15761098 intron Gli - chr2L 15761142 intron Gli - chr2L 15761185 intron Gli - chr2L_5_15760001 chr2L_15760001 RAL-757 389 chr2L 15894338 15894355 chr2L 15894665 15894676 6 327 2.5 8.0 5.2 1.0 338 chr2L 15894338 intergenic not near genes chr2L 15894507 intergenic not near genes chr2L 15894676 intergenic not near genes chr2L_6_15890001 chr2L_15890001 RAL-757 390 chr2L 15915675 15915685 chr2L 15915732 15915762 6 70 6.5 5.5 6.0 0.9 87 chr2L 15915675 intron beat-Ib - chr2L 15915718 intron beat-Ib - chr2L 15915762 intron beat-Ib - chr2L_6_15915001 chr2L_15915001 RAL-757 391 chr2L 15944137 15944156 chr2L 15944278 15944297 6 138 7.5 3.0 5.2 1.0 160 chr2L 15944137 intron beat-Ib - chr2L 15944217 intron beat-Ib - chr2L 15944297 intron beat-Ib - chr2L_6_15940001 chr2L_15940001 RAL-757 392 chr2L 15944157 15944172 chr2L 15944277 15944313 10 134 3.5 3.0 3.2 2.4 156 chr2L 15944157 intron beat-Ib - chr2L 15944235 intron beat-Ib - chr2L 15944313 intron beat-Ib - chr2L_10_15940001 chr2L_15940001 RAL-757 393 chr2L 15956022 15956059 chr2L 15957489 15957520 hobo 17 1463 3.5 7.0 5.2 2.7 1498 chr2L 15956022 intron beat-Ib - chr2L 15956771 intron beat-Ib - chr2L 15957520 intron beat-Ib - chr2L_17_15955001 chr2L_15955001 RAL-757 394 chr2L 16008691 16008722 chr2L 16008769 16008800 4 71 1.0 3.0 2.0 1.3 109 chr2L 16008691 intron beat-Ic + chr2L 16008746 intron beat-Ic + chr2L 16008800 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-757 395 chr2L 16012127 16012140 chr2L 16012207 16012210 4 78 3.0 4.0 3.5 0.9 83 chr2L 16012127 intron beat-Ic + chr2L 16012168 intron beat-Ic + chr2L 16012210 intron beat-Ic + chr2L_4_16010001 chr2L_16010001 RAL-757 396 chr2L 16058124 16058144 chr2L 16058265 16058285 10 140 6.0 3.0 4.5 1.8 161 chr2L 16058124 intron beat-Ia + chr2L 16058204 intron beat-Ia + chr2L 16058285 intron beat-Ia + chr2L_10_16055001 chr2L_16055001 RAL-757 397 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 7 145889 18.0 37.0 27.5 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-757 398 chr2L 16141148 16141184 chr2L 16146369 16146391 copia 5 5210 0.5 4.0 2.2 1.6 5243 chr2L 16141148 intergenic not near genes chr2L 16143770 intergenic not near genes chr2L 16146391 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-757 399 chr2L 9084336 9084340 chr2L 16217660 16217660 10 7133322 17.0 37.0 27.0 0.4 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-757 400 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 18.0 37.0 27.5 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-757 401 chr2L 16391805 16391829 chr2L 16391880 16391904 6 76 2.5 2.5 2.5 1.7 99 chr2L 16391805 intergenic not near genes chr2L 16391854 intergenic not near genes chr2L 16391904 intergenic not near genes chr2L_6_16390001 chr2L_16390001 RAL-757 402 chr2L 16498158 16498192 chr2L 16498337 16498373 23 177 1.0 5.0 3.0 5.8 215 chr2L 16498158 intron Tpr2 + chr2L 16498266 intron Tpr2 + chr2L 16498373 intron Tpr2 + chr2L_23_16495001 chr2L_16495001 RAL-757 403 chr2L 16511971 16511995 chr2L 16519085 16519109 HMS-Beagle 12 7112 2.5 4.0 3.2 2.9 7138 chr2L 16511971 intron CG5953 - chr2L 16515540 intron CG5953 - chr2L 16519109 intron CG5953 - chr2L_12_16515001 chr2L_16515001 RAL-757 404 chr2L 16583092 16583128 chr2L 16583180 16583216 18 85 4.5 4.5 4.5 3.3 124 chr2L 16583092 intron CG42389 + chr2L 16583154 intron CG42389 + chr2L 16583216 intron CG42389 + chr2L_18_16580001 chr2L_16580001 RAL-757 405 chr2L 16583550 16583581 chr2L 16583684 16583686 14 127 2.5 3.5 3.0 3.5 136 chr2L 16583550 intron CG42389 + chr2L 16583618 intron CG42389 + chr2L 16583686 intron CG42389 + chr2L_14_16580001 chr2L_16580001 RAL-757 406 chr2L 16589818 16589824 chr2L 16589908 16589913 4 90 3.0 9.5 6.2 0.6 95 chr2L 16589818 intron CG42389 + chr2L 16589866 intron CG42389 + chr2L 16589913 intron CG42389 + chr2L_4_16585001 chr2L_16585001 RAL-757 407 chr2L 16670429 16670446 chr2L 16670497 16670520 7 74 4.5 7.5 6.0 1.0 91 chr2L 16670429 intron Trpgamma - chr2L 16670474 intron Trpgamma - chr2L 16670520 intron Trpgamma - chr2L_7_16670001 chr2L_16670001 RAL-757 408 chr2L 16694131 16694149 chr2L 16694217 16694226 7 84 8.0 4.0 6.0 1.0 95 chr2L 16694131 intron grp + chr2L 16694178 intron grp + chr2L 16694226 intron grp + chr2L_7_16690001 chr2L_16690001 RAL-757 409 chr2L 16695260 16695275 chr2L 16695344 16695359 7 81 4.0 6.0 5.0 1.2 99 chr2L 16695260 intron grp + chr2L 16695310 intron grp + chr2L 16695359 intron grp + chr2L_7_16695001 chr2L_16695001 RAL-757 410 chr2L 16695276 16695292 chr2L 16695343 16695375 6 76 1.5 6.0 3.8 1.2 99 chr2L 16695276 intron grp + chr2L 16695326 intron grp + chr2L 16695375 intron grp + chr2L_6_16695001 chr2L_16695001 RAL-757 411 chr2L 16697068 16697084 chr2L 16697261 16697277 8 193 4.5 3.0 3.8 1.7 209 chr2L 16697068 intron grp + chr2L 16697172 intron grp + chr2L 16697277 intron grp + chr2L_8_16695001 chr2L_16695001 RAL-757 412 chr2L 16764969 16764999 chr2L 16765049 16765079 13 79 2.5 4.0 3.2 3.1 110 chr2L 16764969 intergenic not near genes chr2L 16765024 intergenic not near genes chr2L 16765079 intergenic not near genes chr2L_13_16765001 chr2L_16765001 RAL-757 413 chr2L 16818833 16818860 chr2L 16818909 16818936 17 72 5.5 0.5 3.0 4.2 103 chr2L 16818833 intron,intron CG13280 -,mdy + chr2L 16818884 intron,intron CG13280 -,mdy + chr2L 16818936 intron,intron CG13280 -,mdy + chr2L_17_16815001 chr2L_16815001 RAL-757 414 chr2L 16841014 16841044 chr2L 16841090 16841120 14 74 3.5 3.0 3.2 3.3 106 chr2L 16841014 intron,intron SclA +,SclB + chr2L 16841067 intron,intron SclA +,SclB + chr2L 16841120 intron,intron SclA +,SclB + chr2L_14_16840001 chr2L_16840001 RAL-757 415 chr2L 16850551 16850581 chr2L 16850641 16850672 8 92 2.5 3.5 3.0 2.0 121 chr2L 16850551 intron CG31810 - chr2L 16850612 intron CG31810 - chr2L 16850672 intron CG31810 - chr2L_8_16850001 chr2L_16850001 RAL-757 416 chr2L 16870109 16870142 chr2L 16870508 16870535 15 397 4.5 9.5 7.0 1.9 426 chr2L 16870109 5` UTR CR31781 + chr2L 16870322 5` UTR CR31781 + chr2L 16870535 5` UTR CR31781 + chr2L_15_16870001 chr2L_16870001 RAL-757 417 chr2L 16958108 16958140 chr2L 16962896 16962928 Doc 10 4786 3.0 12.0 7.5 1.2 4820 chr2L 16958108 intergenic not near genes chr2L 16960518 intergenic not near genes chr2L 16962928 intergenic not near genes chr2L_10_16960001 chr2L_16960001 RAL-757 418 chr2L 16968260 16968267 chr2L 16968338 16968356 5 86 2.5 6.0 4.2 1.0 96 chr2L 16968260 intergenic not near genes chr2L 16968308 intergenic not near genes chr2L 16968356 intergenic not near genes chr2L_5_16965001 chr2L_16965001 RAL-757 419 chr2L 15761197 15761208 chr2L 17030490 17030493 5 1269287 13.0 26.0 19.5 0.2 1269296 chr2L 15761197 intron Gli - chr2L 16395845 intergenic not near genes chr2L 17030493 intergenic not near genes chr2L_5_16395001 chr2L_16395001 RAL-757 420 chr2L 17032502 17032523 chr2L 17032587 17032608 10 80 3.5 5.0 4.2 1.9 106 chr2L 17032502 intergenic not near genes chr2L 17032555 intergenic not near genes chr2L 17032608 intergenic not near genes chr2L_10_17030001 chr2L_17030001 RAL-757 421 chr2L 17033915 17033933 chr2L 17034001 17034019 7 86 10.0 5.5 7.8 0.8 104 chr2L 17033915 intergenic not near genes chr2L 17033967 intergenic not near genes chr2L 17034019 intergenic not near genes chr2L_7_17030001 chr2L_17030001 RAL-757 422 chr2L 17054282 17054321 chr2L 17054374 17054397 4 86 3.5 0.0 1.8 1.4 115 chr2L 17054282 intergenic not near genes chr2L 17054340 intergenic not near genes chr2L 17054397 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-757 423 chr2L 17066386 17066421 chr2L 17066465 17066499 10 76 4.5 5.0 4.8 1.7 113 chr2L 17066386 intergenic not near genes chr2L 17066442 intergenic not near genes chr2L 17066499 intergenic not near genes chr2L_10_17065001 chr2L_17065001 RAL-757 424 chr2L 17070200 17070215 chr2L 17070296 17070311 8 96 5.0 5.0 5.0 1.3 111 chr2L 17070200 intergenic not near genes chr2L 17070256 intergenic not near genes chr2L 17070311 intergenic not near genes chr2L_8_17070001 chr2L_17070001 RAL-757 425 chr2L 17158735 17158764 chr2L 17158834 17158864 8 101 0.5 4.5 2.5 2.3 129 chr2L 17158735 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158800 intron,intron CG34106 +,beat-IIIa + chr2L 17158864 intron,intron CG34106 +,beat-IIIa + chr2L_8_17155001 chr2L_17155001 RAL-757 426 chr2L 17167567 17167592 chr2L 17167808 17167832 pogo 6 240 2.5 4.0 3.2 1.4 265 chr2L 17167567 intron,intron CG34106 +,beat-IIIa + chr2L 17167700 intron,intron CG34106 +,beat-IIIa + chr2L 17167832 intron,intron CG34106 +,beat-IIIa + chr2L_6_17165001 chr2L_17165001 RAL-757 427 chr2L 17169067 17169100 chr2L 17169153 17169185 12 80 6.0 3.0 4.5 2.2 118 chr2L 17169067 intron,intron CG34106 +,beat-IIIa + chr2L 17169126 intron,intron CG34106 +,beat-IIIa + chr2L 17169185 intron,intron CG34106 +,beat-IIIa + chr2L_12_17165001 chr2L_17165001 RAL-757 428 chr2L 17187442 17187473 chr2L 17187612 17187644 18 170 3.5 5.0 4.2 3.5 202 chr2L 17187442 intergenic beat-IIIc - chr2L 17187543 intergenic beat-IIIc - chr2L 17187644 3` UTR beat-IIIc - chr2L_18_17185001 chr2L_17185001 RAL-757 429 chr2L 17199166 17199194 chr2L 17200631 17200661 hobo 12 1462 6.0 6.0 6.0 1.7 1495 chr2L 17199166 intron beat-IIIc - chr2L 17199914 intron beat-IIIc - chr2L 17200661 intron beat-IIIc - chr2L_12_17195001 chr2L_17195001 RAL-757 430 chr2L 17242614 17242649 chr2L 17242697 17242732 7 81 5.0 6.0 5.5 1.1 118 chr2L 17242614 intron beat-IIIc - chr2L 17242673 intron beat-IIIc - chr2L 17242732 intron beat-IIIc - chr2L_7_17240001 chr2L_17240001 RAL-757 431 chr2L 17249738 17249746 chr2L 17249816 17249823 4 78 7.0 5.0 6.0 0.6 85 chr2L 17249738 intron beat-IIIc - chr2L 17249780 intron beat-IIIc - chr2L 17249823 intron beat-IIIc - chr2L_4_17245001 chr2L_17245001 RAL-757 432 chr2L 17261217 17261246 chr2L 17261308 17261323 4 86 0.0 6.5 3.2 1.0 106 chr2L 17261217 intergenic beat-IIIc - chr2L 17261270 intergenic not near genes chr2L 17261323 intergenic not near genes chr2L_4_17260001 chr2L_17260001 RAL-757 433 chr2L 17273195 17273218 chr2L 17277971 17278001 F-element 6 4778 5.0 3.0 4.0 1.2 4806 chr2L 17273195 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278001 intergenic not near genes chr2L_6_17275001 chr2L_17275001 RAL-757 434 chr2L 17289235 17289264 chr2L 17289314 17289343 6 79 2.0 3.5 2.8 1.6 108 chr2L 17289235 intergenic not near genes chr2L 17289289 intergenic not near genes chr2L 17289343 intergenic not near genes chr2L_6_17285001 chr2L_17285001 RAL-757 435 chr2L 17304982 17305012 chr2L 17305160 17305189 4 172 5.5 1.0 3.2 1.0 207 chr2L 17304982 intergenic not near genes chr2L 17305086 intergenic not near genes chr2L 17305189 intergenic not near genes chr2L_4_17305001 chr2L_17305001 RAL-757 436 chr2L 17310370 17310403 chr2L 17310464 17310494 10 92 1.0 0.0 0.5 6.7 124 chr2L 17310370 intergenic not near genes chr2L 17310432 intergenic not near genes chr2L 17310494 intergenic not near genes chr2L_10_17310001 chr2L_17310001 RAL-757 437 chr2L 17339128 17339151 chr2L 17339205 17339228 10 77 10.0 4.5 7.2 1.2 100 chr2L 17339128 intergenic not near genes chr2L 17339178 intergenic not near genes chr2L 17339228 intergenic not near genes chr2L_10_17335001 chr2L_17335001 RAL-757 438 chr2L 17339154 17339157 chr2L 17339203 17339225 4 64 7.5 4.0 5.8 0.6 71 chr2L 17339154 intergenic not near genes chr2L 17339190 intergenic not near genes chr2L 17339225 intergenic not near genes chr2L_4_17335001 chr2L_17335001 RAL-757 439 chr2L 17372345 17372368 chr2L 17372425 17372434 6 78 2.5 6.0 4.2 1.2 89 chr2L 17372345 intron Lrch - chr2L 17372390 intron Lrch - chr2L 17372434 intron Lrch - chr2L_6_17370001 chr2L_17370001 RAL-757 440 chr2L 17405677 17405689 chr2L 17406119 17406135 4 443 8.5 3.0 5.8 0.6 458 chr2L 17405677 exon CLIP-190 + chr2L 17405906 exon CLIP-190 + chr2L 17406135 exon CLIP-190 + chr2L_4_17405001 chr2L_17405001 RAL-757 441 chr2L 17425772 17425796 chr2L 17425895 17425917 13 124 4.5 2.5 3.5 2.9 145 chr2L 17425772 intron Dif - chr2L 17425844 intron Dif - chr2L 17425917 intron Dif - chr2L_13_17425001 chr2L_17425001 RAL-757 442 chr2L 17432019 17432049 chr2L 17432120 17432156 1360 11 101 0.0 1.5 0.8 6.1 137 chr2L 17432019 intron Dif - chr2L 17432088 intron Dif - chr2L 17432156 intron Dif - chr2L_11_17430001 chr2L_17430001 RAL-757 443 chr2L 17456410 17456427 chr2L 17456492 17456503 6 82 4.5 0.5 2.5 1.7 93 chr2L 17456410 intron CG5050 + chr2L 17456456 intron CG5050 + chr2L 17456503 intron CG5050 + chr2L_6_17455001 chr2L_17455001 RAL-757 444 chr2L 17637167 17637200 chr2L 17637252 17637285 9 83 4.0 5.0 4.5 1.6 118 chr2L 17637167 intergenic not near genes chr2L 17637226 intergenic not near genes chr2L 17637285 intergenic not near genes chr2L_9_17635001 chr2L_17635001 RAL-757 445 chr2L 17702398 17702401 chr2L 17702489 17702492 4 91 1.5 1.0 1.2 1.8 94 chr2L 17702398 intron CadN - chr2L 17702445 intron CadN - chr2L 17702492 intron CadN - chr2L_4_17700001 chr2L_17700001 RAL-757 446 chr2L 17723794 17723800 chr2L 17723887 17723892 4 93 5.0 4.0 4.5 0.7 98 chr2L 17723794 intron CadN - chr2L 17723843 intron CadN - chr2L 17723892 intron CadN - chr2L_4_17720001 chr2L_17720001 RAL-757 447 chr2L 17819920 17819953 chr2L 17825123 17825153 copia 8 5201 2.5 3.5 3.0 2.0 5233 chr2L 17819920 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825153 intron CadN2 - chr2L_8_17820001 chr2L_17820001 RAL-757 448 chr2L 17880001 17880022 chr2L 17880087 17880109 4 86 6.0 3.0 4.5 0.7 108 chr2L 17880001 intergenic not near genes chr2L 17880055 intergenic not near genes chr2L 17880109 intergenic not near genes chr2L_4_17880001 chr2L_17880001 RAL-757 449 chr2L 17938032 17938056 chr2L 17938228 17938252 11 196 7.0 3.5 5.2 1.8 220 chr2L 17938032 intergenic not near genes chr2L 17938142 intergenic not near genes chr2L 17938252 intergenic not near genes chr2L_11_17935001 chr2L_17935001 RAL-757 450 chr2L 17940714 17940743 chr2L 17940799 17940828 10 80 2.5 2.0 2.2 3.1 114 chr2L 17940714 intergenic not near genes chr2L 17940771 intergenic not near genes chr2L 17940828 intergenic not near genes chr2L_10_17940001 chr2L_17940001 RAL-757 451 chr2L 17951953 17951980 chr2L 17953420 17953447 hobo 13 1463 2.5 3.5 3.0 3.2 1494 chr2L 17951953 intergenic CR44398 -,CR44397 - chr2L 17952700 intergenic not near genes chr2L 17953447 intergenic not near genes chr2L_13_17950001 chr2L_17950001 RAL-757 452 chr2L 18051887 18051906 chr2L 18061023 18061032 roo 7 9137 6.0 4.5 5.2 1.1 9145 chr2L 18051887 intron rdo + chr2L 18056460 intron rdo + chr2L 18061032 intron rdo + chr2L_7_18055001 chr2L_18055001 RAL-757 453 chr2L 18078279 18078304 chr2L 18078365 18078390 10 81 5.5 9.5 7.5 1.2 111 chr2L 18078279 5` UTR Arr1 + chr2L 18078334 5` UTR Arr1 + chr2L 18078390 exon Arr1 + chr2L_10_18075001 chr2L_18075001 RAL-757 454 chr2L 18079815 18079837 chr2L 18079901 18079921 12 85 6.0 6.0 6.0 1.7 106 chr2L 18079815 intron Arr1 + chr2L 18079868 intron Arr1 + chr2L 18079921 intron Arr1 + chr2L_12_18075001 chr2L_18075001 RAL-757 455 chr2L 18107789 18107812 chr2L 18107873 18107896 4 79 3.5 8.5 6.0 0.6 107 chr2L 18107789 intergenic not near genes chr2L 18107842 intergenic not near genes chr2L 18107896 intergenic not near genes chr2L_4_18105001 chr2L_18105001 RAL-757 456 chr2L 18264065 18264094 chr2L 18264142 18264155 14 74 2.0 3.0 2.5 4.0 90 chr2L 18264065 intron CG42750 - chr2L 18264110 intron CG42750 - chr2L 18264155 intron CG42750 - chr2L_14_18260001 chr2L_18260001 RAL-757 457 chr2L 18311021 18311031 chr2L 18311347 18311365 5 330 2.0 2.5 2.2 1.6 344 chr2L 18311021 5` UTR CR45721 + chr2L 18311193 5` UTR CR45721 + chr2L 18311365 intergenic CR45721 + chr2L_5_18310001 chr2L_18310001 RAL-757 458 chr2L 18408032 18408046 chr2L 18412809 18412830 Doc 7 4783 7.5 1.0 4.2 1.3 4798 chr2L 18408032 intergenic not near genes chr2L 18410431 intergenic not near genes chr2L 18412830 intergenic not near genes chr2L_7_18410001 chr2L_18410001 RAL-757 459 chr2L 18423853 18423872 chr2L 18423944 18423963 10 91 6.5 3.5 5.0 1.7 110 chr2L 18423853 intergenic not near genes chr2L 18423908 intergenic not near genes chr2L 18423963 intergenic not near genes chr2L_10_18420001 chr2L_18420001 RAL-757 460 chr2L 18525502 18525519 chr2L 18525698 18525715 8 195 5.5 5.5 5.5 1.2 213 chr2L 18525502 intron CG10211 + chr2L 18525608 intron CG10211 + chr2L 18525715 intron CG10211 + chr2L_8_18525001 chr2L_18525001 RAL-757 461 chr2L 18525521 18525528 chr2L 18525697 18525724 5 191 4.5 5.0 4.8 0.9 203 chr2L 18525521 intron CG10211 + chr2L 18525622 intron CG10211 + chr2L 18525724 intron CG10211 + chr2L_5_18525001 chr2L_18525001 RAL-757 462 chr2L 18541735 18541756 chr2L 18541811 18541832 10 71 1.5 3.5 2.5 2.9 97 chr2L 18541735 intron Pde11 - chr2L 18541784 intron Pde11 - chr2L 18541832 intron Pde11 - chr2L_10_18540001 chr2L_18540001 RAL-757 463 chr2L 16217660 16217660 chr2L 18622718 18622719 6 2405058 37.0 22.5 29.8 0.2 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_6_17420001 chr2L_17420001 RAL-757 464 chr2L 18629369 18629395 chr2L 18629454 18629480 6 85 5.5 2.5 4.0 1.2 111 chr2L 18629369 intron MESR3 + chr2L 18629424 intron MESR3 + chr2L 18629480 intron MESR3 + chr2L_6_18625001 chr2L_18625001 RAL-757 465 chr2L 18847674 18847700 chr2L 18847749 18847754 8 72 5.5 2.5 4.0 1.6 80 chr2L 18847674 intron CG17321 + chr2L 18847714 intron CG17321 + chr2L 18847754 intron CG17321 + chr2L_8_18845001 chr2L_18845001 RAL-757 466 chr2L 18876865 18876880 chr2L 18876943 18876958 6 78 5.5 7.0 6.2 0.8 93 chr2L 18876865 intron tup - chr2L 18876912 intron tup - chr2L 18876958 intron tup - chr2L_6_18875001 chr2L_18875001 RAL-757 467 chr2L 18883852 18883878 chr2L 18883934 18883960 5 81 6.5 4.5 5.5 0.8 108 chr2L 18883852 intergenic not near genes chr2L 18883906 intergenic not near genes chr2L 18883960 intergenic not near genes chr2L_5_18880001 chr2L_18880001 RAL-757 468 chr2L 18902637 18902655 chr2L 18902905 18902933 6 276 3.5 3.0 3.2 1.4 296 chr2L 18902637 intergenic not near genes chr2L 18902785 intergenic not near genes chr2L 18902933 intergenic not near genes chr2L_6_18900001 chr2L_18900001 RAL-757 469 chr2L 18926579 18926591 chr2L 18926686 18926698 6 107 3.0 2.0 2.5 1.7 119 chr2L 18926579 intron ssp3 - chr2L 18926638 intron ssp3 - chr2L 18926698 intron ssp3 - chr2L_6_18925001 chr2L_18925001 RAL-757 470 chr2L 19147378 19147401 chr2L 19154404 19154436 297 11 7029 4.0 10.0 7.0 1.4 7058 chr2L 19147378 intron brat + chr2L 19150907 intron brat + chr2L 19154436 intron brat + chr2L_11_19150001 chr2L_19150001 RAL-757 471 chr2L 19189978 19190003 chr2L 19190121 19190142 10 144 3.5 4.5 4.0 2.0 164 chr2L 19189978 intergenic pigeon +,drl + chr2L 19190060 intergenic pigeon +,drl + chr2L 19190142 intergenic drl +,pigeon + chr2L_10_19190001 chr2L_19190001 RAL-757 472 chr2L 19191544 19191556 chr2L 19191655 19191678 5 117 7.5 2.0 4.8 0.9 134 chr2L 19191544 intron drl + chr2L 19191611 intron drl + chr2L 19191678 intron drl + chr2L_5_19190001 chr2L_19190001 RAL-757 473 chr2L 19237303 19237332 chr2L 19237403 19237413 4 93 3.5 7.5 5.5 0.6 110 chr2L 19237303 intergenic not near genes chr2L 19237358 intergenic not near genes chr2L 19237413 intergenic not near genes chr2L_4_19235001 chr2L_19235001 RAL-757 474 chr2L 19345014 19345026 chr2L 19357222 19357225 blood 6 12205 6.0 1.5 3.8 1.2 12211 chr2L 19345014 intron dnt - chr2L 19351120 intron dnt - chr2L 19357225 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-757 475 chr2L 19345029 19345045 chr2L 19357220 19357254 blood 8 12198 3.5 1.5 2.5 2.3 12225 chr2L 19345029 intron dnt - chr2L 19351142 intron dnt - chr2L 19357254 intron dnt - chr2L_8_19350001 chr2L_19350001 RAL-757 476 chr2L 19357549 19357557 chr2L 19357638 19357647 4 90 11.5 8.0 9.8 0.4 98 chr2L 19357549 intron dnt - chr2L 19357598 intron dnt - chr2L 19357647 intron dnt - chr2L_4_19355001 chr2L_19355001 RAL-757 477 chr2L 19357558 19357567 chr2L 19357636 19357657 5 86 8.5 7.5 8.0 0.6 99 chr2L 19357558 intron dnt - chr2L 19357608 intron dnt - chr2L 19357657 intron dnt - chr2L_5_19355001 chr2L_19355001 RAL-757 478 chr2L 19374493 19374505 chr2L 19374602 19374604 5 107 6.5 3.0 4.8 0.9 111 chr2L 19374493 intergenic not near genes chr2L 19374548 intergenic not near genes chr2L 19374604 intergenic not near genes chr2L_5_19370001 chr2L_19370001 RAL-757 479 chr2L 19405621 19405640 chr2L 19405709 19405730 6 88 5.0 3.5 4.2 1.2 109 chr2L 19405621 intron Pax - chr2L 19405676 intron Pax - chr2L 19405730 intron Pax - chr2L_6_19405001 chr2L_19405001 RAL-757 480 chr2L 19420802 19420836 chr2L 19421280 19421313 17 471 4.0 6.0 5.0 2.8 511 chr2L 19420802 intron Pax - chr2L 19421058 intron Pax - chr2L 19421313 intron Pax - chr2L_17_19420001 chr2L_19420001 RAL-757 481 chr2L 19441069 19441089 chr2L 19441146 19441166 13 77 4.5 8.0 6.2 1.8 97 chr2L 19441069 intron CG10237 - chr2L 19441118 intron CG10237 - chr2L 19441166 5` UTR CG10237 - chr2L_13_19440001 chr2L_19440001 RAL-757 482 chr2L 19560003 19560036 chr2L 19560256 19560288 11 247 4.5 7.5 6.0 1.6 285 chr2L 19560003 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560288 intron Tep5 + chr2L_11_19560001 chr2L_19560001 RAL-757 483 chr2L 19560834 19560862 chr2L 19560913 19560942 18 78 5.5 1.5 3.5 4.0 108 chr2L 19560834 intron Tep5 + chr2L 19560888 exon Tep5 + chr2L 19560942 exon Tep5 + chr2L_18_19560001 chr2L_19560001 RAL-757 484 chr2L 19561343 19561365 chr2L 19561484 19561506 11 139 3.5 5.5 4.5 2.0 163 chr2L 19561343 exon Tep5 + chr2L 19561424 exon Tep5 + chr2L 19561506 exon Tep5 + chr2L_11_19560001 chr2L_19560001 RAL-757 485 chr2L 19562062 19562082 chr2L 19562147 19562151 10 80 6.0 6.0 6.0 1.4 89 chr2L 19562062 intron Tep5 + chr2L 19562106 intron Tep5 + chr2L 19562151 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-757 486 chr2L 19601578 19601581 chr2L 19601649 19601658 4 74 9.0 4.5 6.8 0.5 80 chr2L 19601578 intron,intron Lar +,CR44978 - chr2L 19601618 intron,intron Lar +,CR44978 - chr2L 19601658 intron,intron Lar +,CR44978 - chr2L_4_19600001 chr2L_19600001 RAL-757 487 chr2L 19601583 19601600 chr2L 19601648 19601667 5 69 4.5 3.5 4.0 1.0 84 chr2L 19601583 intron,intron Lar +,CR44978 - chr2L 19601625 intron,intron Lar +,CR44978 - chr2L 19601667 intron,intron Lar +,CR44978 - chr2L_5_19600001 chr2L_19600001 RAL-757 488 chr2L 19620095 19620106 chr2L 19621083 19621095 jockey 6 987 7.0 4.0 5.5 0.9 1000 chr2L 19620095 intron Lar + chr2L 19620595 intron Lar + chr2L 19621095 intron Lar + chr2L_6_19620001 chr2L_19620001 RAL-757 489 chr2L 19620109 19620130 chr2L 19621081 19621118 jockey 7 986 4.0 3.0 3.5 1.6 1009 chr2L 19620109 intron Lar + chr2L 19620614 intron Lar + chr2L 19621118 intron Lar + chr2L_7_19620001 chr2L_19620001 RAL-757 490 chr2L 19638533 19638573 chr2L 19638621 19638661 16 86 5.0 5.5 5.2 2.6 128 chr2L 19638533 intron Lar + chr2L 19638597 intron Lar + chr2L 19638661 intron Lar + chr2L_16_19635001 chr2L_19635001 RAL-757 491 chr2L 19652569 19652601 chr2L 19674005 19674037 opus 11 21434 6.5 3.5 5.0 1.8 21468 chr2L 19652569 intron Lar + chr2L 19663303 intron Lar + chr2L 19674037 intron Lar + chr2L_11_19660001 chr2L_19660001 RAL-757 492 chr2L 19703535 19703568 chr2L 19712671 19712701 roo 23 9133 7.5 6.5 7.0 2.9 9166 chr2L 19703535 intron Lar + chr2L 19708118 intron Lar + chr2L 19712701 intron Lar + chr2L_23_19705001 chr2L_19705001 RAL-757 493 chr2L 19713568 19713598 chr2L 19713701 19713730 6 131 3.0 5.0 4.0 1.2 162 chr2L 19713568 intron Lar + chr2L 19713649 intron Lar + chr2L 19713730 intron Lar + chr2L_6_19710001 chr2L_19710001 RAL-757 494 chr2L 19737376 19737383 chr2L 19740827 19740841 1360 6 3458 2.5 9.0 5.8 0.9 3465 chr2L 19737376 intergenic Nf-YB + chr2L 19739108 intergenic not near genes chr2L 19740841 intergenic not near genes chr2L_6_19735001 chr2L_19735001 RAL-757 495 chr2L 19762816 19762837 chr2L 19763053 19763079 pogo 13 240 5.0 3.0 4.0 2.6 263 chr2L 19762816 intron fbp - chr2L 19762948 intron fbp - chr2L 19763079 intron fbp - chr2L_13_19760001 chr2L_19760001 RAL-757 496 chr2L 19773166 19773193 chr2L 19773248 19773280 12 85 4.5 4.5 4.5 2.2 114 chr2L 19773166 intergenic not near genes chr2L 19773223 intergenic not near genes chr2L 19773280 intergenic not near genes chr2L_12_19770001 chr2L_19770001 RAL-757 497 chr2L 19824419 19824435 chr2L 19824502 19824518 5 83 2.0 4.5 3.2 1.2 99 chr2L 19824419 intron sick + chr2L 19824468 intron sick + chr2L 19824518 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-757 498 chr2L 19837287 19837310 chr2L 19837355 19837390 10 76 3.5 1.0 2.2 3.1 103 chr2L 19837287 intron sick + chr2L 19837338 intron sick + chr2L 19837390 intron sick + chr2L_10_19835001 chr2L_19835001 RAL-757 499 chr2L 19846249 19846276 chr2L 19846330 19846357 8 79 0.5 4.5 2.5 2.3 108 chr2L 19846249 intron sick + chr2L 19846303 intron sick + chr2L 19846357 intron sick + chr2L_8_19845001 chr2L_19845001 RAL-757 500 chr2L 19901497 19901520 chr2L 19901595 19901622 6 102 4.0 4.5 4.2 1.2 125 chr2L 19901497 intron sick + chr2L 19901560 intron sick + chr2L 19901622 intron sick + chr2L_6_19900001 chr2L_19900001 RAL-757 501 chr2L 19911292 19911325 chr2L 19911379 19911400 11 85 4.5 3.5 4.0 2.2 108 chr2L 19911292 intron,3` UTR sick +,CR43097 - chr2L 19911346 intron,3` UTR sick +,CR43097 - chr2L 19911400 intron,3` UTR sick +,CR43097 - chr2L_11_19910001 chr2L_19910001 RAL-757 502 chr2L 19912057 19912071 chr2L 19912149 19912164 5 92 2.0 5.0 3.5 1.1 107 chr2L 19912057 intron,exon sick +,TotF - chr2L 19912110 intron,exon sick +,TotF - chr2L 19912164 intron,exon sick +,TotF - chr2L_5_19910001 chr2L_19910001 RAL-757 503 chr2L 19977448 19977466 chr2L 19983190 19983203 9 5731 39.5 45.0 42.2 0.2 5755 chr2L 19977448 intron CG43861 - chr2L 19980326 intron CG43861 - chr2L 19983203 intron CG43861 - chr2L_9_19980001 chr2L_19980001 RAL-757 504 chr2L 20005874 20005904 chr2L 20010948 20010980 flea 13 5073 5.0 9.5 7.2 1.6 5106 chr2L 20005874 intron CG43861 - chr2L 20008427 intron CG43861 - chr2L 20010980 intron CG43861 - chr2L_13_20005001 chr2L_20005001 RAL-757 505 chr2L 20011732 20011760 chr2L 20011814 20011843 8 81 0.0 2.5 1.2 3.6 111 chr2L 20011732 intron CG43861 - chr2L 20011788 intron CG43861 - chr2L 20011843 intron CG43861 - chr2L_8_20010001 chr2L_20010001 RAL-757 506 chr2L 20022089 20022093 chr2L 20022202 20022205 4 112 11.0 3.0 7.0 0.5 116 chr2L 20022089 intergenic not near genes chr2L 20022147 intergenic not near genes chr2L 20022205 intergenic not near genes chr2L_4_20020001 chr2L_20020001 RAL-757 507 chr2L 20272115 20272145 chr2L 20282826 20282846 copia 14 10708 6.0 4.0 5.0 2.3 10731 chr2L 20272115 intergenic not near genes chr2L 20277480 intergenic not near genes chr2L 20282846 intergenic not near genes chr2L_14_20275001 chr2L_20275001 RAL-757 508 chr2L 20296523 20296534 chr2L 20296603 20296614 4 80 3.5 4.5 4.0 0.8 91 chr2L 20296523 intergenic CR43414 - chr2L 20296568 intergenic CR43414 - chr2L 20296614 intergenic CR43414 - chr2L_4_20295001 chr2L_20295001 RAL-757 509 chr2L 20299416 20299439 chr2L 20299536 20299559 7 119 3.0 5.0 4.0 1.4 143 chr2L 20299416 intergenic not near genes chr2L 20299488 intergenic not near genes chr2L 20299559 intergenic not near genes chr2L_7_20295001 chr2L_20295001 RAL-757 510 chr2L 20303161 20303190 chr2L 20310629 20310658 blood 20 7466 2.0 5.5 3.8 4.2 7497 chr2L 20303161 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310658 intergenic not near genes chr2L_20_20305001 chr2L_20305001 RAL-757 511 chr2L 20310883 20310919 chr2L 20310961 20310998 12 79 1.0 5.5 3.2 2.9 115 chr2L 20310883 intergenic spir + chr2L 20310940 intergenic spir + chr2L 20310998 intergenic spir + chr2L_12_20310001 chr2L_20310001 RAL-757 512 chr2L 20336077 20336080 chr2L 20336162 20336165 4 85 9.5 4.5 7.0 0.5 88 chr2L 20336077 intron spir + chr2L 20336121 intron spir + chr2L 20336165 intron spir + chr2L_4_20335001 chr2L_20335001 RAL-757 513 chr2L 20336081 20336100 chr2L 20336159 20336169 4 78 5.5 3.0 4.2 0.8 88 chr2L 20336081 intron spir + chr2L 20336125 intron spir + chr2L 20336169 intron spir + chr2L_4_20335001 chr2L_20335001 RAL-757 514 chr2L 20420125 20420147 chr2L 20420195 20420223 6 71 8.5 5.0 6.8 0.8 98 chr2L 20420125 intron Arpc2 + chr2L 20420174 intron Arpc2 + chr2L 20420223 intron Arpc2 + chr2L_6_20420001 chr2L_20420001 RAL-757 515 chr2L 20429684 20429703 chr2L 20429788 20429797 6 97 6.0 5.5 5.8 0.9 113 chr2L 20429684 intron CG31688 + chr2L 20429740 intron CG31688 + chr2L 20429797 intron CG31688 + chr2L_6_20425001 chr2L_20425001 RAL-757 516 chr2L 20480547 20480552 chr2L 20480670 20480675 4 123 9.0 5.0 7.0 0.5 128 chr2L 20480547 intron CR44980 - chr2L 20480611 intron CR44980 - chr2L 20480675 intron CR44980 - chr2L_4_20480001 chr2L_20480001 RAL-757 517 chr2L 20498689 20498702 chr2L 20498788 20498792 8 96 5.5 10.5 8.0 0.9 103 chr2L 20498689 intergenic not near genes chr2L 20498740 intergenic not near genes chr2L 20498792 intergenic not near genes chr2L_8_20495001 chr2L_20495001 RAL-757 518 chr2L 20568662 20568687 chr2L 20569052 20569077 X-element 9 387 4.5 3.0 3.8 1.9 415 chr2L 20568662 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569077 intron CR45347 + chr2L_9_20565001 chr2L_20565001 RAL-757 519 chr2L 20601791 20601814 chr2L 20601869 20601891 11 77 6.0 3.5 4.8 1.9 100 chr2L 20601791 intron CR44909 - chr2L 20601841 intron CR44909 - chr2L 20601891 intron CR44909 - chr2L_11_20600001 chr2L_20600001 RAL-757 520 chr2L 20602717 20602749 chr2L 20602805 20602837 11 87 1.0 2.5 1.8 3.9 120 chr2L 20602717 intron CR44909 - chr2L 20602777 intron CR44909 - chr2L 20602837 intron CR44909 - chr2L_11_20600001 chr2L_20600001 RAL-757 521 chr2L 20639512 20639526 chr2L 20639780 20639793 INE-1 7 272 5.0 10.0 7.5 0.8 281 chr2L 20639512 intergenic not near genes chr2L 20639652 intergenic CG31680 + chr2L 20639793 intergenic CG31680 + chr2L_7_20635001 chr2L_20635001 RAL-757 522 chr2L 20668690 20668718 chr2L 20668763 20668794 11 72 5.5 7.5 6.5 1.5 104 chr2L 20668690 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668794 intron CG31678 - chr2L_11_20665001 chr2L_20665001 RAL-757 523 chr2L 20695796 20695828 chr2L 20695884 20695916 15 85 3.5 3.0 3.2 3.6 120 chr2L 20695796 intron Hr38 - chr2L 20695856 intron Hr38 - chr2L 20695916 intron Hr38 - chr2L_15_20695001 chr2L_20695001 RAL-757 524 chr2L 20801675 20801689 chr2L 20801739 20801768 7 77 6.5 0.0 3.2 1.7 93 chr2L 20801675 intron CG9328 + chr2L 20801722 intron CG9328 + chr2L 20801768 intron CG9328 + chr2L_7_20800001 chr2L_20800001 RAL-757 525 chr2L 20826516 20826545 chr2L 20826596 20826623 9 79 8.0 6.5 7.2 1.1 107 chr2L 20826516 intron CG9331 + chr2L 20826570 intron CG9331 + chr2L 20826623 intron CG9331 + chr2L_9_20825001 chr2L_20825001 RAL-757 526 chr2L 20835806 20835840 chr2L 20836523 20836551 Quasimodo 22 716 5.5 3.0 4.2 4.2 745 chr2L 20835806 5` UTR Oseg5 - chr2L 20836178 intergenic Oseg5 -,Spn38F - chr2L 20836551 intergenic Spn38F - chr2L_22_20835001 chr2L_20835001 RAL-757 527 chr2L 20840028 20840059 chr2L 20840237 20840271 18 207 1.0 5.5 3.2 4.3 243 chr2L 20840028 intergenic not near genes chr2L 20840150 intergenic not near genes chr2L 20840271 intergenic CG31676 + chr2L_18_20840001 chr2L_20840001 RAL-757 528 chr2L 20846759 20846795 chr2L 20846843 20846843 15 78 6.5 3.5 5.0 2.5 84 chr2L 20846759 intron CG31676 + chr2L 20846801 intron CG31676 + chr2L 20846843 intron CG31676 + chr2L_15_20845001 chr2L_20845001 RAL-757 529 chr2L 20862583 20862596 chr2L 20862663 20862693 5 94 0.0 6.5 3.2 1.2 110 chr2L 20862583 intergenic not near genes chr2L 20862638 intergenic not near genes chr2L 20862693 intergenic not near genes chr2L_5_20860001 chr2L_20860001 RAL-757 530 chr2L 20901474 20901487 chr2L 20902621 20902651 1360 4 1153 1.0 4.5 2.8 1.1 1177 chr2L 20901474 intron,intron CG43739 -,sky - chr2L 20902062 intron,intron CG43739 -,sky - chr2L 20902651 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-757 531 chr2L 20911034 20911060 chr2L 20911108 20911136 17 72 10.0 7.5 8.8 1.7 102 chr2L 20911034 intron,intron CG43739 -,sky - chr2L 20911085 intron,intron CG43739 -,sky - chr2L 20911136 intron,intron CG43739 -,sky - chr2L_17_20910001 chr2L_20910001 RAL-757 532 chr2L 20946946 20946962 chr2L 20947032 20947049 6 84 4.5 3.5 4.0 1.2 103 chr2L 20946946 intergenic CR44606 - chr2L 20946998 intergenic CR44606 - chr2L 20947049 intergenic CR44606 - chr2L_6_20945001 chr2L_20945001 RAL-757 533 chr2L 20967082 20967108 chr2L 20967168 20967194 11 84 2.5 3.0 2.8 2.9 112 chr2L 20967082 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967194 3` UTR CG42238 - chr2L_11_20965001 chr2L_20965001 RAL-757 534 chr2L 20976643 20976681 chr2L 20981458 20981491 X-element 16 4813 3.0 10.5 6.8 2.1 4848 chr2L 20976643 intron CG42238 - chr2L 20979067 intron CG42238 - chr2L 20981491 intron CG42238 - chr2L_16_20975001 chr2L_20975001 RAL-757 535 chr2L 20991037 20991049 chr2L 20991115 20991127 4 78 11.0 2.0 6.5 0.5 90 chr2L 20991037 intron CG42238 - chr2L 20991082 intron CG42238 - chr2L 20991127 intron CG42238 - chr2L_4_20990001 chr2L_20990001 RAL-757 536 chr2L 20991053 20991068 chr2L 20991113 20991146 12 70 5.5 1.5 3.5 2.7 93 chr2L 20991053 intron CG42238 - chr2L 20991100 intron CG42238 - chr2L 20991146 intron CG42238 - chr2L_12_20990001 chr2L_20990001 RAL-757 537 chr2L 21020283 21020309 chr2L 21023950 21023986 NOF 13 3670 4.0 4.5 4.2 2.5 3703 chr2L 21020283 intron CG42238 - chr2L 21022134 intron CG42238 - chr2L 21023986 intron CG42238 - chr2L_13_21020001 chr2L_21020001 RAL-757 538 chr2L 21041141 21041168 chr2L 21049396 21049429 Tirant 8 8257 4.5 4.5 4.5 1.5 8288 chr2L 21041141 intron CG42238 - chr2L 21045285 intron CG42238 - chr2L 21049429 intron CG42238 - chr2L_8_21045001 chr2L_21045001 RAL-757 539 chr2L 21074921 21074950 chr2L 21075010 21075041 11 89 2.5 2.5 2.5 3.1 120 chr2L 21074921 intergenic tadr + chr2L 21074981 intergenic tadr + chr2L 21075041 intergenic tadr + chr2L_11_21070001 chr2L_21070001 RAL-757 540 chr2L 21086428 21086450 chr2L 21086543 21086560 11 113 11.0 5.5 8.2 1.2 132 chr2L 21086428 5` UTR CG33509 - chr2L 21086494 5` UTR CG33509 - chr2L 21086560 intergenic CG33509 -,ppk13 - chr2L_11_21085001 chr2L_21085001 RAL-757 541 chr2L 21088934 21088949 chr2L 21089002 21089032 5 69 5.0 8.0 6.5 0.7 98 chr2L 21088934 intergenic ppk13 -,CG9259 + chr2L 21088983 intergenic ppk13 -,CG9259 + chr2L 21089032 intergenic ppk13 -,CG9259 + chr2L_5_21085001 chr2L_21085001 RAL-757 542 chr2L 21158876 21158911 chr2L 21158953 21158955 8 72 5.5 7.0 6.2 1.1 79 chr2L 21158876 intergenic CG9248 +,CG9249 - chr2L 21158916 5` UTR CG9248 + chr2L 21158955 5` UTR CG9248 + chr2L_8_21155001 chr2L_21155001 RAL-757 543 chr2L 21286604 21286635 chr2L 21286682 21286698 12 74 4.5 5.5 5.0 2.0 94 chr2L 21286604 exon Mio - chr2L 21286651 intron Mio - chr2L 21286698 intron Mio - chr2L_12_21285001 chr2L_21285001 RAL-757 544 chr2L 21307472 21307499 chr2L 21307552 21307562 12 72 2.0 4.0 3.0 3.0 90 chr2L 21307472 intron Mio - chr2L 21307517 intron Mio - chr2L 21307562 intron Mio - chr2L_12_21305001 chr2L_21305001 RAL-757 545 chr2L 21347575 21347582 chr2L 21355021 21355054 blood 7 7464 1.5 6.0 3.8 1.5 7479 chr2L 21347575 intron Tsp39D + chr2L 21351314 intron Tsp39D + chr2L 21355054 intron Tsp39D + chr2L_7_21350001 chr2L_21350001 RAL-757 546 chr2L 21597027 21597058 chr2L 21604771 21604790 roo 14 7738 5.5 4.5 5.0 2.3 7763 chr2L 21597027 intergenic not near genes chr2L 21600908 intergenic not near genes chr2L 21604790 intergenic not near genes chr2L_14_21600001 chr2L_21600001 RAL-757 547 chr2L 21653196 21653225 chr2L 21656496 21656520 invader4 8 3300 4.5 6.5 5.5 1.2 3324 chr2L 21653196 intergenic not near genes chr2L 21654858 intergenic not near genes chr2L 21656520 intergenic not near genes chr2L_8_21650001 chr2L_21650001 RAL-757 548 chr2L 21754657 21754689 chr2L 21754738 21754770 21 78 4.5 5.5 5.0 3.5 113 chr2L 21754657 intron step - chr2L 21754714 intron step - chr2L 21754770 intron step - chr2L_21_21750001 chr2L_21750001 RAL-757 549 chr2L 21755500 21755524 chr2L 21755624 21755641 9 120 1.5 8.0 4.8 1.6 141 chr2L 21755500 intron step - chr2L 21755570 intron step - chr2L 21755641 intron step - chr2L_9_21755001 chr2L_21755001 RAL-757 550 chr2L 21757574 21757596 chr2L 21757655 21757675 8 79 6.5 7.0 6.8 1.0 101 chr2L 21757574 intergenic step -,CG1416 + chr2L 21757624 intergenic step -,CG1416 + chr2L 21757675 intergenic step -,CG1416 + chr2L_8_21755001 chr2L_21755001 RAL-757 551 chr2L 21836404 21836424 chr2L 21836482 21836509 6 81 3.5 2.5 3.0 1.5 105 chr2L 21836404 3` UTR tsh + chr2L 21836456 3` UTR tsh + chr2L 21836509 3` UTR tsh + chr2L_6_21835001 chr2L_21835001 RAL-757 552 chr2L 21855474 21855510 chr2L 21855560 21855597 12 85 1.5 2.0 1.8 4.3 123 chr2L 21855474 intron CR44917 + chr2L 21855536 intron CR44917 + chr2L 21855597 intron CR44917 + chr2L_12_21855001 chr2L_21855001 RAL-757 553 chr2L 21859319 21859351 chr2L 21859397 21859419 18 72 6.0 2.5 4.2 3.5 100 chr2L 21859319 intron CR44917 + chr2L 21859369 intron CR44917 + chr2L 21859419 intron CR44917 + chr2L_18_21855001 chr2L_21855001 RAL-757 554 chr2L 21953797 21953799 chr2L 21954698 21954700 4 901 33.5 43.0 38.2 0.1 903 chr2L 21953797 intergenic not near genes chr2L 21954248 intergenic not near genes chr2L 21954700 intergenic not near genes chr2L_4_21950001 chr2L_21950001 RAL-757 555 chr2L 21953796 21953817 chr2L 21954704 21954725 12 904 38.5 41.5 40.0 0.3 929 chr2L 21953796 intergenic not near genes chr2L 21954260 intergenic not near genes chr2L 21954725 intergenic not near genes chr2L_12_21950001 chr2L_21950001 RAL-757 556 chr2L 21981685 21981713 chr2L 21990850 21990878 roo 14 9162 4.0 8.5 6.2 1.9 9193 chr2L 21981685 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990878 exon CG2528 - chr2L_14_21985001 chr2L_21985001 RAL-757 557 chr2L 21994615 21994651 chr2L 21994691 21994726 21 68 5.5 7.5 6.5 2.8 111 chr2L 21994615 intergenic not near genes chr2L 21994670 intergenic not near genes chr2L 21994726 intergenic not near genes chr2L_21_21990001 chr2L_21990001 RAL-757 558 chr2L 22148582 22148602 chr2L 22148649 22148679 14 74 2.5 5.0 3.8 2.9 97 chr2L 22148582 intron CG42748 + chr2L 22148630 intron CG42748 + chr2L 22148679 intron CG42748 + chr2L_14_22145001 chr2L_22145001 RAL-757 559 chr2L 22178051 22178070 chr2L 22178126 22178132 7 71 3.0 4.5 3.8 1.5 81 chr2L 22178051 intron CG3635 + chr2L 22178092 intron CG3635 + chr2L 22178132 intron CG3635 + chr2L_7_22175001 chr2L_22175001 RAL-757 560 chr2L 22192024 22192046 chr2L 22192113 22192135 6 87 14.5 4.0 9.2 0.6 111 chr2L 22192024 intron Ir40a - chr2L 22192080 intron Ir40a - chr2L 22192135 intron Ir40a - chr2L_6_22190001 chr2L_22190001 RAL-757 561 chr2L 22199015 22199043 chr2L 22199105 22199133 4 90 6.5 4.0 5.2 0.6 118 chr2L 22199015 intron Ir40a - chr2L 22199074 intron Ir40a - chr2L 22199133 intron Ir40a - chr2L_4_22195001 chr2L_22195001 RAL-757 562 chr2L 22214533 22214545 chr2L 22214624 22214630 7 89 3.0 5.5 4.2 1.3 97 chr2L 22214533 intergenic Ir40a - chr2L 22214582 intergenic Ir40a - chr2L 22214630 intergenic Ir40a - chr2L_7_22210001 chr2L_22210001 RAL-757 563 chr2L 22545978 22546008 chr2L 22546074 22546103 15 91 2.5 3.0 2.8 3.9 125 chr2L 22545978 intron CG17490 + chr2L 22546040 intron CG17490 + chr2L 22546103 intron CG17490 + chr2L_15_22545001 chr2L_22545001 RAL-757 564 chr2L 22548927 22548945 chr2L 22550135 22550170 1360 11 1218 2.0 4.0 3.0 2.8 1243 chr2L 22548927 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550170 intergenic CG17493 + chr2L_11_22545001 chr2L_22545001 RAL-757 565 chr2L 22581970 22582001 chr2L 22583759 22583790 S-element 15 1786 5.5 3.0 4.2 2.9 1820 chr2L 22581970 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583790 intron CG17494 + chr2L_15_22580001 chr2L_22580001 RAL-757 566 chr2L 22676131 22676153 chr2L 22676369 22676391 12 236 3.5 3.0 3.2 2.9 260 chr2L 22676131 intron CG40006 - chr2L 22676261 intron CG40006 - chr2L 22676391 intron CG40006 - chr2L_12_22675001 chr2L_22675001 RAL-757 567 chr2L 22679806 22679811 chr2L 22684568 22684583 F-element 5 4767 9.5 8.5 9.0 0.5 4777 chr2L 22679806 intron CG40006 - chr2L 22682194 intron CG40006 - chr2L 22684583 intron CG40006 - chr2L_5_22680001 chr2L_22680001 RAL-757 568 chr2L 22679814 22679828 chr2L 22684566 22684581 F-element 10 4763 6.5 8.0 7.2 1.2 4767 chr2L 22679814 intron CG40006 - chr2L 22682198 intron CG40006 - chr2L 22684581 intron CG40006 - chr2L_10_22680001 chr2L_22680001 RAL-757 569 chr2L 22693924 22693949 chr2L 22694010 22694019 6 82 1.0 7.0 4.0 1.2 95 chr2L 22693924 intron CG40006 - chr2L 22693972 intron CG40006 - chr2L 22694019 intron CG40006 - chr2L_6_22690001 chr2L_22690001 RAL-757 570 chr2L 22724033 22724038 chr2L 22724118 22724129 8 89 2.0 1.0 1.5 3.2 96 chr2L 22724033 intron CG40006 - chr2L 22724081 intron CG40006 - chr2L 22724129 intron CG40006 - chr2L_8_22720001 chr2L_22720001 RAL-757 571 chr2L 22776424 22776451 chr2L 22778208 22778239 S-element 20 1786 3.5 3.5 3.5 4.4 1815 chr2L 22776424 intergenic not near genes chr2L 22777332 intergenic not near genes chr2L 22778239 intergenic not near genes chr2L_20_22775001 chr2L_22775001 RAL-757 572 chr2L 23168857 23168880 chr2L 23168933 23168935 4 71 6.5 4.5 5.5 0.6 78 chr2L 23168857 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168896 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168935 intron CG12567 - chr2L_4_23165001 chr2L_23165001 RAL-757 573 chr2R 330686 330705 chr2R 331999 332019 5 1310 3.5 0.5 2.0 1.7 1333 chr2R 330686 intergenic not near genes chr2R 331352 intergenic not near genes chr2R 332019 intergenic not near genes chr2R_5_330001 chr2R_330001 RAL-757 574 chr2R 529338 529348 chr2R 537948 537973 Max-element 6 8616 9.5 10.5 10.0 0.5 8635 chr2R 529338 intron CG40378 + chr2R 533656 intron CG40378 + chr2R 537973 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-757 575 chr2R 529349 529356 chr2R 537946 537963 Max-element 6 8608 6.5 10.0 8.2 0.7 8614 chr2R 529349 intron CG40378 + chr2R 533656 intron CG40378 + chr2R 537963 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-757 576 chr2R 552767 552779 chr2R 553970 553987 1360 4 1209 1.5 3.5 2.5 1.1 1220 chr2R 552767 intron CG40378 + chr2R 553377 intron CG40378 + chr2R 553987 intron CG40378 + chr2R_4_550001 chr2R_550001 RAL-757 577 chr2R 1072743 1072765 chr2R 1075089 1075110 Cr1a 8 2347 30.0 8.0 19.0 0.4 2367 chr2R 1072743 intron rl + chr2R 1073926 intron rl + chr2R 1075110 intron rl + chr2R_8_1070001 chr2R_1070001 RAL-757 578 chr2R 1082366 1082385 chr2R 1087127 1087146 Doc 13 4765 8.5 5.5 7.0 1.6 4780 chr2R 1082366 intron rl + chr2R 1084756 intron rl + chr2R 1087146 intron rl + chr2R_13_1080001 chr2R_1080001 RAL-757 579 chr2R 1340064 1340086 chr2R 1340153 1340159 6 87 12.5 17.5 15.0 0.4 95 chr2R 1340064 intergenic not near genes chr2R 1340112 intergenic not near genes chr2R 1340159 intergenic not near genes chr2R_6_1340001 chr2R_1340001 RAL-757 580 chr2R 2015132 2015164 chr2R 2015209 2015241 9 73 3.0 3.5 3.2 2.1 109 chr2R 2015132 intron CG17684 - chr2R 2015186 intron CG17684 - chr2R 2015241 intron CG17684 - chr2R_9_2015001 chr2R_2015001 RAL-757 581 chr2R 2498983 2499008 chr2R 2508130 2508155 roo 6 9142 8.5 6.0 7.2 0.7 9172 chr2R 2498983 intron MFS17 - chr2R 2503569 intron MFS17 - chr2R 2508155 intron MFS17 - chr2R_6_2500001 chr2R_2500001 RAL-757 582 chr2R 2508312 2508339 chr2R 2508450 2508477 5 138 4.5 6.5 5.5 0.8 165 chr2R 2508312 intron MFS17 - chr2R 2508394 intron MFS17 - chr2R 2508477 intron MFS17 - chr2R_5_2505001 chr2R_2505001 RAL-757 583 chr2R 2591548 2591567 chr2R 2594211 2594222 roo 11 2670 34.0 19.5 26.8 0.4 2674 chr2R 2591548 intergenic not near genes chr2R 2592885 intergenic not near genes chr2R 2594222 intergenic not near genes chr2R_11_2590001 chr2R_2590001 RAL-757 584 chr2R 3130230 3130255 chr2R 3130312 3130313 8 82 5.0 3.5 4.2 1.5 83 chr2R 3130230 intron CG42596 + chr2R 3130272 intron CG42596 + chr2R 3130313 intron CG42596 + chr2R_8_3130001 chr2R_3130001 RAL-757 585 chr2R 3532630 3532635 chr2R 3536068 3536078 Doc 4 3442 3.0 7.0 5.0 0.7 3448 chr2R 3532630 intergenic not near genes chr2R 3534354 intergenic not near genes chr2R 3536078 intergenic not near genes chr2R_4_3530001 chr2R_3530001 RAL-757 586 chr2R 3583059 3583082 chr2R 3583134 3583158 7 75 9.5 3.5 6.5 0.9 99 chr2R 3583059 intergenic not near genes chr2R 3583108 intergenic not near genes chr2R 3583158 intergenic not near genes chr2R_7_3580001 chr2R_3580001 RAL-757 587 chr2R 4015311 4015348 chr2R 4015484 4015521 17 170 1.5 4.0 2.8 4.5 210 chr2R 4015311 intron Haspin + chr2R 4015416 intron Haspin + chr2R 4015521 intron Haspin + chr2R_17_4015001 chr2R_4015001 RAL-757 588 chr2R 4387295 4387308 chr2R 4387435 4387441 8 143 6.5 0.0 3.2 1.9 146 chr2R 4387295 intron Gprk1 - chr2R 4387368 intron Gprk1 - chr2R 4387441 intron Gprk1 - chr2R_8_4385001 chr2R_4385001 RAL-757 589 chr2R 4621318 4621345 chr2R 4621857 4621883 11 534 4.5 4.0 4.2 2.1 565 chr2R 4621318 3` UTR CR44101 - chr2R 4621600 3` UTR CR44101 - chr2R 4621883 3` UTR CR44101 - chr2R_11_4620001 chr2R_4620001 RAL-757 590 chr2R 4622956 4622987 chr2R 4624110 4624137 1360 10 1151 4.5 5.5 5.0 1.7 1181 chr2R 4622956 intergenic CR44101 - chr2R 4623546 intergenic not near genes chr2R 4624137 intergenic not near genes chr2R_10_4620001 chr2R_4620001 RAL-757 591 chr2R 4751713 4751730 chr2R 4751807 4751813 9 92 3.0 2.0 2.5 2.6 100 chr2R 4751713 intron conu + chr2R 4751763 intron conu + chr2R 4751813 intron conu + chr2R_9_4750001 chr2R_4750001 RAL-757 592 chr2R 5237366 5237372 chr2R 5237447 5237454 4 82 1.5 3.5 2.5 1.1 88 chr2R 5237366 intron Nipped-A - chr2R 5237410 intron Nipped-A - chr2R 5237454 intron Nipped-A - chr2R_4_5235001 chr2R_5235001 RAL-757 593 chr2R 5245703 5245732 chr2R 5245790 5245819 7 81 7.0 7.0 7.0 0.9 116 chr2R 5245703 intron Nipped-A - chr2R 5245761 intron Nipped-A - chr2R 5245819 intron Nipped-A - chr2R_7_5245001 chr2R_5245001 RAL-757 594 chr2R 5256760 5256767 chr2R 5256848 5256855 6 88 24.5 12.5 18.5 0.3 95 chr2R 5256760 intergenic not near genes chr2R 5256808 intergenic not near genes chr2R 5256855 intergenic not near genes chr2R_6_5255001 chr2R_5255001 RAL-757 595 chr2R 5256769 5256778 chr2R 5256846 5256866 13 85 16.5 11.5 14.0 0.9 97 chr2R 5256769 intergenic not near genes chr2R 5256818 intergenic not near genes chr2R 5256866 intergenic not near genes chr2R_13_5255001 chr2R_5255001 RAL-757 596 chr2R 5256779 5256790 chr2R 5256845 5256878 15 80 8.5 11.5 10.0 1.4 99 chr2R 5256779 intergenic not near genes chr2R 5256828 intergenic not near genes chr2R 5256878 intergenic not near genes chr2R_15_5255001 chr2R_5255001 RAL-757 597 chr2R 5418002 5418027 chr2R 5420626 5420642 Burdock 15 2623 7.0 7.5 7.2 1.8 2640 chr2R 5418002 intron laccase2 + chr2R 5419322 intron laccase2 + chr2R 5420642 intron laccase2 + chr2R_15_5415001 chr2R_5415001 RAL-757 598 chr2R 5421528 5421550 chr2R 5421610 5421644 12 88 32.5 33.0 32.8 0.4 116 chr2R 5421528 intron laccase2 + chr2R 5421586 intron laccase2 + chr2R 5421644 intron laccase2 + chr2R_12_5420001 chr2R_5420001 RAL-757 599 chr2R 5491664 5491698 chr2R 5491757 5491784 21 90 5.5 7.0 6.2 2.9 120 chr2R 5491664 intron CG30440 - chr2R 5491724 intron CG30440 - chr2R 5491784 intron CG30440 - chr2R_21_5490001 chr2R_5490001 RAL-757 600 chr2R 5509516 5509545 chr2R 5509612 5509641 24 94 6.0 3.0 4.5 4.4 125 chr2R 5509516 intron CG30438 + chr2R 5509578 intron CG30438 + chr2R 5509641 intron CG30438 + chr2R_24_5505001 chr2R_5505001 RAL-757 601 chr2R 5541939 5541965 chr2R 5542170 5542183 12 230 1.0 6.0 3.5 2.7 244 chr2R 5541939 intron CG30438 + chr2R 5542061 intron CG30438 + chr2R 5542183 intron CG30438 + chr2R_12_5540001 chr2R_5540001 RAL-757 602 chr2R 5543197 5543223 chr2R 5547278 5547307 invader1 10 4080 0.0 5.5 2.8 2.6 4110 chr2R 5543197 intron CG30438 + chr2R 5545252 intron CG30438 + chr2R 5547307 intron CG30438 + chr2R_10_5545001 chr2R_5545001 RAL-757 603 chr2R 5581404 5581423 chr2R 5627613 5627632 4 46209 22.0 10.5 16.2 0.2 46228 chr2R 5581404 intergenic not near genes chr2R 5604518 intron Fis1 - chr2R 5627632 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-757 604 chr2R 5655793 5655801 chr2R 5655878 5655884 5 84 7.5 0.5 4.0 1.0 91 chr2R 5655793 exon CG1344 + chr2R 5655838 3` UTR CG1344 + chr2R 5655884 3` UTR CG1344 + chr2R_5_5655001 chr2R_5655001 RAL-757 605 chr2R 5655806 5655826 chr2R 5655875 5655889 15 80 2.0 0.5 1.2 6.8 83 chr2R 5655806 exon CG1344 + chr2R 5655848 3` UTR CG1344 + chr2R 5655889 3` UTR CG1344 + chr2R_15_5655001 chr2R_5655001 RAL-757 606 chr2R 5660209 5660239 chr2R 5660293 5660323 12 83 4.0 6.0 5.0 2.0 114 chr2R 5660209 intron Not3 - chr2R 5660266 intron Not3 - chr2R 5660323 intron Not3 - chr2R_12_5660001 chr2R_5660001 RAL-757 607 chr2R 5712313 5712326 chr2R 5712390 5712403 4 77 12.5 6.5 9.5 0.4 90 chr2R 5712313 intron ap - chr2R 5712358 intron ap - chr2R 5712403 intron ap - chr2R_4_5710001 chr2R_5710001 RAL-757 608 chr2R 5712327 5712338 chr2R 5712389 5712410 4 69 10.0 5.5 7.8 0.5 83 chr2R 5712327 intron ap - chr2R 5712368 intron ap - chr2R 5712410 intron ap - chr2R_4_5710001 chr2R_5710001 RAL-757 609 chr2R 5869293 5869306 chr2R 5874354 5874360 flea 6 5061 6.0 10.0 8.0 0.7 5067 chr2R 5869293 intergenic not near genes chr2R 5871826 intergenic not near genes chr2R 5874360 intergenic not near genes chr2R_6_5870001 chr2R_5870001 RAL-757 610 chr2R 5876872 5876902 chr2R 5876973 5876988 11 97 4.5 2.5 3.5 2.4 116 chr2R 5876872 intergenic not near genes chr2R 5876930 intergenic not near genes chr2R 5876988 intergenic not near genes chr2R_11_5875001 chr2R_5875001 RAL-757 611 chr2R 5878930 5878940 chr2R 5879009 5879020 6 79 6.0 8.5 7.2 0.7 90 chr2R 5878930 intergenic CG44438 - chr2R 5878975 intergenic CG44438 - chr2R 5879020 intergenic CG44438 - chr2R_6_5875001 chr2R_5875001 RAL-757 612 chr2R 5878941 5878959 chr2R 5879007 5879036 9 72 2.0 8.5 5.2 1.5 95 chr2R 5878941 intergenic CG44438 - chr2R 5878988 intergenic CG44438 - chr2R 5879036 intergenic CG44438 - chr2R_9_5875001 chr2R_5875001 RAL-757 613 chr2R 5885369 5885377 chr2R 5885494 5885506 7 128 3.5 2.0 2.8 1.8 137 chr2R 5885369 5` UTR CR44125 + chr2R 5885438 5` UTR CR44125 + chr2R 5885506 5` UTR CR44125 + chr2R_7_5885001 chr2R_5885001 RAL-757 614 chr2R 5902156 5902187 chr2R 5909715 5909746 17.6 13 7555 2.5 3.5 3.0 3.2 7590 chr2R 5902156 intron CG43366 + chr2R 5905951 intron CG43366 + chr2R 5909746 intron CG43366 + chr2R_13_5905001 chr2R_5905001 RAL-757 615 chr2R 5953083 5953095 chr2R 5953161 5953173 5 78 6.0 0.0 3.0 1.2 90 chr2R 5953083 intergenic not near genes chr2R 5953128 intergenic not near genes chr2R 5953173 intergenic not near genes chr2R_5_5950001 chr2R_5950001 RAL-757 616 chr2R 5991931 5991964 chr2R 5992019 5992052 19 83 3.0 3.5 3.2 4.5 121 chr2R 5991931 intron Src42A + chr2R 5991992 intron Src42A + chr2R 5992052 intron Src42A + chr2R_19_5990001 chr2R_5990001 RAL-757 617 chr2R 6025186 6025192 chr2R 6025387 6025399 4 205 2.5 6.5 4.5 0.7 213 chr2R 6025186 intergenic not near genes chr2R 6025292 intergenic not near genes chr2R 6025399 intergenic not near genes chr2R_4_6025001 chr2R_6025001 RAL-757 618 chr2R 6033442 6033475 chr2R 6033526 6033555 12 83 4.5 4.0 4.2 2.3 113 chr2R 6033442 intron SCAP - chr2R 6033498 intron SCAP - chr2R 6033555 intron SCAP - chr2R_12_6030001 chr2R_6030001 RAL-757 619 chr2R 6037455 6037479 chr2R 6037540 6037559 9 84 3.5 2.0 2.8 2.4 104 chr2R 6037455 intron CG14591 - chr2R 6037507 intron CG14591 - chr2R 6037559 intron CG14591 - chr2R_9_6035001 chr2R_6035001 RAL-757 620 chr2R 6088371 6088387 chr2R 6088464 6088480 7 90 9.5 6.5 8.0 0.8 109 chr2R 6088371 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088480 intergenic not near genes chr2R_7_6085001 chr2R_6085001 RAL-757 621 chr2R 6096723 6096732 chr2R 6101914 6101915 BS 4 5190 13.5 5.5 9.5 0.4 5192 chr2R 6096723 intron EcR - chr2R 6099319 intron EcR - chr2R 6101915 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-757 622 chr2R 6129346 6129358 chr2R 6129403 6129428 11 68 4.0 5.5 4.8 1.9 82 chr2R 6129346 intron EcR - chr2R 6129387 intron EcR - chr2R 6129428 intron EcR - chr2R_11_6125001 chr2R_6125001 RAL-757 623 chr2R 6168194 6168229 chr2R 6168275 6168311 20 80 5.5 3.5 4.5 3.6 117 chr2R 6168194 intron EcR - chr2R 6168252 intron EcR - chr2R 6168311 intron EcR - chr2R_20_6165001 chr2R_6165001 RAL-757 624 chr2R 6178128 6178143 chr2R 6178246 6178269 7 123 4.0 5.0 4.5 1.3 141 chr2R 6178128 intergenic not near genes chr2R 6178198 intergenic not near genes chr2R 6178269 intergenic not near genes chr2R_7_6175001 chr2R_6175001 RAL-757 625 chr2R 6194696 6194704 chr2R 6194769 6194787 6 80 5.0 7.5 6.2 0.8 91 chr2R 6194696 intron Ptr - chr2R 6194742 intron Ptr - chr2R 6194787 intron Ptr - chr2R_6_6190001 chr2R_6190001 RAL-757 626 chr2R 6494540 6494552 chr2R 6499291 6499314 F-element 8 4760 4.0 1.5 2.8 2.1 4774 chr2R 6494540 intergenic not near genes chr2R 6496927 intergenic not near genes chr2R 6499314 intergenic not near genes chr2R_8_6495001 chr2R_6495001 RAL-757 627 chr2R 6539823 6539832 chr2R 6539946 6539954 6 123 5.0 7.0 6.0 0.9 131 chr2R 6539823 intron jing + chr2R 6539888 intron jing + chr2R 6539954 intron jing + chr2R_6_6535001 chr2R_6535001 RAL-757 628 chr2R 6539838 6539856 chr2R 6539944 6539979 9 121 3.0 5.0 4.0 1.8 141 chr2R 6539838 intron jing + chr2R 6539908 intron jing + chr2R 6539979 intron jing + chr2R_9_6535001 chr2R_6535001 RAL-757 629 chr2R 6541251 6541276 chr2R 6541355 6541370 6 98 2.5 2.0 2.2 1.9 119 chr2R 6541251 intron jing + chr2R 6541310 intron jing + chr2R 6541370 intron jing + chr2R_6_6540001 chr2R_6540001 RAL-757 630 chr2R 6546718 6546750 chr2R 6546819 6546834 20 98 6.0 5.0 5.5 3.1 116 chr2R 6546718 intron jing + chr2R 6546776 intron jing + chr2R 6546834 intron jing + chr2R_20_6545001 chr2R_6545001 RAL-757 631 chr2R 6559104 6559135 chr2R 6559187 6559210 7 78 3.0 7.5 5.2 1.1 106 chr2R 6559104 intron jing + chr2R 6559157 intron jing + chr2R 6559210 intron jing + chr2R_7_6555001 chr2R_6555001 RAL-757 632 chr2R 6579799 6579804 chr2R 6584886 6584891 flea 4 5087 1.5 4.0 2.8 1.1 5092 chr2R 6579799 intron jing + chr2R 6582345 intron jing + chr2R 6584891 intron jing + chr2R_4_6580001 chr2R_6580001 RAL-757 633 chr2R 6607944 6607948 chr2R 6608045 6608050 4 102 8.5 13.5 11.0 0.3 106 chr2R 6607944 intron jing + chr2R 6607997 intron jing + chr2R 6608050 intron jing + chr2R_4_6605001 chr2R_6605001 RAL-757 634 chr2R 6691124 6691158 chr2R 6691203 6691237 19 76 5.0 5.0 5.0 3.2 113 chr2R 6691124 intron CG9422 + chr2R 6691180 intron CG9422 + chr2R 6691237 intron CG9422 + chr2R_19_6690001 chr2R_6690001 RAL-757 635 chr2R 6696607 6696642 chr2R 6696690 6696701 14 76 2.5 6.0 4.2 2.7 94 chr2R 6696607 5` UTR Mob4 - chr2R 6696654 5` UTR Mob4 - chr2R 6696701 intergenic Rab2 +,Mob4 - chr2R_14_6695001 chr2R_6695001 RAL-757 636 chr2R 6699593 6699624 chr2R 6699675 6699702 17 83 5.0 4.0 4.5 3.1 109 chr2R 6699593 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699702 intergenic Rab2 + chr2R_17_6695001 chr2R_6695001 RAL-757 637 chr2R 6712585 6712600 chr2R 6712682 6712697 6 96 9.0 15.0 12.0 0.5 112 chr2R 6712585 intron,intron CG3409 -,CG45092 - chr2R 6712641 intron,intron CG3409 -,CG45092 - chr2R 6712697 intron,intron CG3409 -,CG45092 - chr2R_6_6710001 chr2R_6710001 RAL-757 638 chr2R 6876224 6876252 chr2R 6876306 6876334 10 80 8.5 5.0 6.8 1.3 110 chr2R 6876224 intron,intron CR44169 +,Spn42Da - chr2R 6876279 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876334 5` UTR,intron CR44169 +,Spn42Da - chr2R_10_6875001 chr2R_6875001 RAL-757 639 chr2R 6895414 6895417 chr2R 6895490 6895495 4 76 4.5 4.0 4.2 0.8 81 chr2R 6895414 intron CG30158 + chr2R 6895454 intron CG30158 + chr2R 6895495 intron CG30158 + chr2R_4_6895001 chr2R_6895001 RAL-757 640 chr2R 6895423 6895437 chr2R 6895486 6895509 6 67 1.5 3.5 2.5 1.7 86 chr2R 6895423 intron CG30158 + chr2R 6895466 intron CG30158 + chr2R 6895509 intron CG30158 + chr2R_6_6895001 chr2R_6895001 RAL-757 641 chr2R 6936234 6936269 chr2R 6936316 6936341 13 76 5.0 3.5 4.2 2.5 107 chr2R 6936234 intron mim - chr2R 6936288 intron mim - chr2R 6936341 intron mim - chr2R_13_6935001 chr2R_6935001 RAL-757 642 chr2R 6948083 6948109 chr2R 6948159 6948183 12 76 6.0 4.5 5.2 1.9 100 chr2R 6948083 intron,intron mim -,CheB42c - chr2R 6948133 intron,intron mim -,CheB42c - chr2R 6948183 intron,intron mim -,CheB42c - chr2R_12_6945001 chr2R_6945001 RAL-757 643 chr2R 7091213 7091244 chr2R 7091295 7091326 20 82 4.5 8.0 6.2 2.8 113 chr2R 7091213 intron esn + chr2R 7091270 intron esn + chr2R 7091326 intron esn + chr2R_20_7090001 chr2R_7090001 RAL-757 644 chr2R 7139944 7139948 chr2R 7141420 7141426 hopper2 4 1484 7.0 7.0 7.0 0.5 1482 chr2R 7139944 intergenic not near genes chr2R 7140685 intergenic not near genes chr2R 7141426 intergenic not near genes chr2R_4_7140001 chr2R_7140001 RAL-757 645 chr2R 7196564 7196593 chr2R 7201339 7201363 F-element 13 4773 4.5 5.5 5.0 2.2 4799 chr2R 7196564 intron pk + chr2R 7198964 intron pk + chr2R 7201363 intron pk + chr2R_13_7195001 chr2R_7195001 RAL-757 646 chr2R 6562326 6562336 chr2R 7231857 7231860 4 669531 17.0 18.5 17.8 0.2 669534 chr2R 6562326 intron jing + chr2R 6897093 intron CG30158 + chr2R 7231860 intergenic not near genes chr2R_4_6895001 chr2R_6895001 RAL-757 647 chr2R 7235822 7235851 chr2R 7240909 7240912 jockey 6 5079 4.5 3.0 3.8 1.2 5090 chr2R 7235822 intergenic not near genes chr2R 7238367 intergenic not near genes chr2R 7240912 intergenic not near genes chr2R_6_7235001 chr2R_7235001 RAL-757 648 chr2R 7243075 7243100 chr2R 7243177 7243200 9 98 1.5 7.0 4.2 1.7 125 chr2R 7243075 3` UTR Ady43A - chr2R 7243138 3` UTR Ady43A - chr2R 7243200 3` UTR Ady43A - chr2R_9_7240001 chr2R_7240001 RAL-757 649 chr2R 7418139 7418165 chr2R 7418218 7418243 12 73 5.5 6.0 5.8 1.8 104 chr2R 7418139 intergenic not near genes chr2R 7418191 intergenic not near genes chr2R 7418243 intergenic not near genes chr2R_12_7415001 chr2R_7415001 RAL-757 650 chr2R 7608409 7608425 chr2R 7613607 7613627 I-element 6 5200 13.5 12.5 13.0 0.4 5218 chr2R 7608409 intron CG1358 - chr2R 7611018 intron CG1358 - chr2R 7613627 intron CG1358 - chr2R_6_7610001 chr2R_7610001 RAL-757 651 chr2R 7608429 7608440 chr2R 7613605 7613620 I-element 7 5190 6.5 11.5 9.0 0.7 5191 chr2R 7608429 intron CG1358 - chr2R 7611024 intron CG1358 - chr2R 7613620 intron CG1358 - chr2R_7_7610001 chr2R_7610001 RAL-757 652 chr2R 7714105 7714115 chr2R 7714154 7714190 7 69 5.0 1.0 3.0 1.8 85 chr2R 7714105 exon CG1942 + chr2R 7714148 3` UTR CG1942 + chr2R 7714190 intergenic CG1942 + chr2R_7_7710001 chr2R_7710001 RAL-757 653 chr2R 7787085 7787115 chr2R 7787167 7787197 9 81 2.5 2.5 2.5 2.6 112 chr2R 7787085 intron CanB2 + chr2R 7787141 intron CanB2 + chr2R 7787197 intron CanB2 + chr2R_9_7785001 chr2R_7785001 RAL-757 654 chr2R 7815671 7815696 chr2R 7822140 7822154 Burdock 8 6466 10.0 5.5 7.8 0.9 6483 chr2R 7815671 intergenic CG1882 + chr2R 7818912 intergenic not near genes chr2R 7822154 3` UTR cathD - chr2R_8_7815001 chr2R_7815001 RAL-757 655 chr2R 7869191 7869217 chr2R 7873976 7873993 Doc 8 4784 4.0 6.5 5.2 1.3 4802 chr2R 7869191 intron Dgk - chr2R 7871592 intron Dgk - chr2R 7873993 intron Dgk - chr2R_8_7870001 chr2R_7870001 RAL-757 656 chr2R 7897136 7897143 chr2R 7897224 7897224 8 87 0.0 9.5 4.8 1.4 88 chr2R 7897136 intron CG30377 + chr2R 7897180 intron CG30377 + chr2R 7897224 intron CG30377 + chr2R_8_7895001 chr2R_7895001 RAL-757 657 chr2R 7897146 7897153 chr2R 7897218 7897242 6 86 0.0 7.5 3.8 1.2 96 chr2R 7897146 intron CG30377 + chr2R 7897194 intron CG30377 + chr2R 7897242 intron CG30377 + chr2R_6_7895001 chr2R_7895001 RAL-757 658 chr2R 7899532 7899550 chr2R 10066494 10066498 7 2166957 5.5 21.0 13.2 0.5 2166966 chr2R 7899532 intron CG30377 + chr2R 8983015 intron CG8213 - chr2R 10066498 5` UTR CG2292 - chr2R_7_8980001 chr2R_8980001 RAL-757 659 chr2R 7916423 7916454 chr2R 7916508 7916536 13 83 3.5 8.5 6.0 1.9 113 chr2R 7916423 5` UTR CG12159 - chr2R 7916480 intergenic CG12159 -,Cul1 + chr2R 7916536 intergenic CG12159 -,Cul1 + chr2R_13_7915001 chr2R_7915001 RAL-757 660 chr2R 7936846 7936863 chr2R 7936910 7936933 10 70 3.0 1.0 2.0 3.3 87 chr2R 7936846 intergenic drosha +,CG8728 - chr2R 7936890 3` UTR CG8728 - chr2R 7936933 3` UTR CG8728 - chr2R_10_7935001 chr2R_7935001 RAL-757 661 chr2R 7942951 7942961 chr2R 7943186 7943192 5 240 4.0 5.5 4.8 0.9 241 chr2R 7942951 intron CG14764 - chr2R 7943072 intron CG14764 - chr2R 7943192 intron CG14764 - chr2R_5_7940001 chr2R_7940001 RAL-757 662 chr2R 8014446 8014450 chr2R 8014526 8014535 4 84 4.0 7.0 5.5 0.6 89 chr2R 8014446 intergenic not near genes chr2R 8014490 intergenic not near genes chr2R 8014535 intergenic not near genes chr2R_4_8010001 chr2R_8010001 RAL-757 663 chr2R 8015660 8015682 chr2R 8017681 8017691 8 2016 2.0 8.5 5.2 1.3 2031 chr2R 8015660 intergenic mir-4981 + chr2R 8016676 intergenic not near genes chr2R 8017691 intergenic not near genes chr2R_8_8015001 chr2R_8015001 RAL-757 664 chr2R 8026814 8026837 chr2R 8026888 8026913 7 76 6.5 5.0 5.8 1.0 99 chr2R 8026814 intergenic CR45267 + chr2R 8026864 intergenic CR45267 + chr2R 8026913 intergenic CR45267 + chr2R_7_8025001 chr2R_8025001 RAL-757 665 chr2R 8068824 8068855 chr2R 8068922 8068952 8 96 3.5 5.5 4.5 1.5 128 chr2R 8068824 intron lig + chr2R 8068888 intron lig + chr2R 8068952 intron lig + chr2R_8_8065001 chr2R_8065001 RAL-757 666 chr2R 8297968 8298000 chr2R 8298048 8298081 17 78 2.5 4.5 3.5 3.8 113 chr2R 8297968 intergenic mir-280 + chr2R 8298024 intergenic mir-280 + chr2R 8298081 intergenic mir-280 + chr2R_17_8295001 chr2R_8295001 RAL-757 667 chr2R 8330860 8330893 chr2R 8331346 8331367 roo 15 483 6.0 5.0 5.5 2.3 507 chr2R 8330860 intron pdm3 + chr2R 8331114 intron pdm3 + chr2R 8331367 intron pdm3 + chr2R_15_8330001 chr2R_8330001 RAL-757 668 chr2R 8338642 8338659 chr2R 8338724 8338741 9 80 2.5 5.5 4.0 1.8 99 chr2R 8338642 intron pdm3 + chr2R 8338692 intron pdm3 + chr2R 8338741 intron pdm3 + chr2R_9_8335001 chr2R_8335001 RAL-757 669 chr2R 8524946 8524977 chr2R 8525085 8525116 6 135 4.0 5.5 4.8 1.0 170 chr2R 8524946 intron mtt - chr2R 8525031 intron mtt - chr2R 8525116 intron mtt - chr2R_6_8525001 chr2R_8525001 RAL-757 670 chr2R 8572331 8572348 chr2R 8572431 8572448 7 102 5.5 5.5 5.5 1.1 117 chr2R 8572331 intergenic Cyp6a13 + chr2R 8572390 intergenic Cyp6a13 + chr2R 8572448 intergenic Cyp6a13 + chr2R_7_8570001 chr2R_8570001 RAL-757 671 chr2R 8635908 8635933 chr2R 8635986 8636011 6 78 0.0 4.0 2.0 2.0 103 chr2R 8635908 intergenic not near genes chr2R 8635960 intergenic not near genes chr2R 8636011 intergenic not near genes chr2R_6_8635001 chr2R_8635001 RAL-757 672 chr2R 8714707 8714723 chr2R 8714794 8714800 6 85 0.0 10.0 5.0 1.0 93 chr2R 8714707 3` UTR PGRP-SC1b + chr2R 8714754 3` UTR PGRP-SC1b + chr2R 8714800 3` UTR PGRP-SC1b + chr2R_6_8710001 chr2R_8710001 RAL-757 673 chr2R 8722771 8722780 chr2R 8723007 8723013 pogo 4 237 10.0 3.0 6.5 0.5 242 chr2R 8722771 intron CG14767 - chr2R 8722892 intron CG14767 - chr2R 8723013 intron CG14767 - chr2R_4_8720001 chr2R_8720001 RAL-757 674 chr2R 8722786 8722793 chr2R 8723003 8723016 pogo 4 220 6.5 3.0 4.8 0.7 230 chr2R 8722786 intron CG14767 - chr2R 8722901 intron CG14767 - chr2R 8723016 intron CG14767 - chr2R_4_8720001 chr2R_8720001 RAL-757 675 chr2R 8777917 8777926 chr2R 8784108 8784111 diver 7 6189 6.5 10.5 8.5 0.7 6194 chr2R 8777917 intergenic not near genes chr2R 8781014 intergenic not near genes chr2R 8784111 intergenic not near genes chr2R_7_8780001 chr2R_8780001 RAL-757 676 chr2R 8777928 8777943 chr2R 8784107 8784134 diver 12 6185 4.0 9.0 6.5 1.6 6206 chr2R 8777928 intergenic not near genes chr2R 8781031 intergenic not near genes chr2R 8784134 intergenic not near genes chr2R_12_8780001 chr2R_8780001 RAL-757 677 chr2R 9076142 9076153 chr2R 9076218 9076229 5 76 3.0 8.0 5.5 0.8 87 chr2R 9076142 intron ana + chr2R 9076186 intron ana + chr2R 9076229 intron ana + chr2R_5_9075001 chr2R_9075001 RAL-757 678 chr2R 9076155 9076163 chr2R 9076217 9076238 4 70 2.0 8.0 5.0 0.7 83 chr2R 9076155 intron ana + chr2R 9076196 intron ana + chr2R 9076238 intron ana + chr2R_4_9075001 chr2R_9075001 RAL-757 679 chr2R 9091822 9091846 chr2R 9091916 9091951 12 100 7.0 2.5 4.8 2.1 129 chr2R 9091822 intron CG8080 - chr2R 9091886 intron CG8080 - chr2R 9091951 intron CG8080 - chr2R_12_9090001 chr2R_9090001 RAL-757 680 chr2R 9151317 9151335 chr2R 9157776 9157795 Burdock 10 6467 7.0 7.5 7.2 1.2 6478 chr2R 9151317 3` UTR CG30345 + chr2R 9154556 intergenic not near genes chr2R 9157795 intergenic CG8008 - chr2R_10_9150001 chr2R_9150001 RAL-757 681 chr2R 9212700 9212714 chr2R 9213180 9213199 roo 4 482 8.0 5.0 6.5 0.5 499 chr2R 9212700 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213199 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-757 682 chr2R 9322388 9322394 chr2R 9322448 9322471 4 72 4.5 2.5 3.5 0.9 83 chr2R 9322388 intron,intron CG13739 -,CG13954 - chr2R 9322430 intron,intron CG13739 -,CG13954 - chr2R 9322471 intron,intron CG13739 -,CG13954 - chr2R_4_9320001 chr2R_9320001 RAL-757 683 chr2R 9322395 9322405 chr2R 9322443 9322481 4 62 3.0 2.5 2.8 1.1 86 chr2R 9322395 intron,intron CG13739 -,CG13954 - chr2R 9322438 intron,intron CG13739 -,CG13954 - chr2R 9322481 intron,intron CG13739 -,CG13954 - chr2R_4_9320001 chr2R_9320001 RAL-757 684 chr2R 9331328 9331342 chr2R 9331392 9331421 9 78 1.5 4.5 3.0 2.2 93 chr2R 9331328 intron,intron CG13739 -,CG13954 - chr2R 9331374 intron,intron CG13739 -,CG13954 - chr2R 9331421 intron,intron CG13739 -,CG13954 - chr2R_9_9330001 chr2R_9330001 RAL-757 685 chr2R 9368132 9368155 chr2R 9368207 9368211 8 70 2.5 1.0 1.8 2.9 79 chr2R 9368132 intron CG13954 - chr2R 9368172 intron CG13954 - chr2R 9368211 intron CG13954 - chr2R_8_9365001 chr2R_9365001 RAL-757 686 chr2R 9480074 9480109 chr2R 9490605 9490637 roo 9 10527 6.0 7.5 6.8 1.2 10563 chr2R 9480074 intergenic not near genes chr2R 9485356 intergenic not near genes chr2R 9490637 intergenic not near genes chr2R_9_9485001 chr2R_9485001 RAL-757 687 chr2R 9551225 9551248 chr2R 9551311 9551330 11 88 3.5 1.5 2.5 3.1 105 chr2R 9551225 intergenic not near genes chr2R 9551278 intergenic not near genes chr2R 9551330 intergenic not near genes chr2R_11_9550001 chr2R_9550001 RAL-757 688 chr2R 9617785 9617805 chr2R 9618037 9618063 15 256 5.5 4.0 4.8 2.6 278 chr2R 9617785 intron Mmp2 - chr2R 9617924 intron Mmp2 - chr2R 9618063 intron Mmp2 - chr2R_15_9615001 chr2R_9615001 RAL-757 689 chr2R 9642420 9642430 chr2R 9642491 9642516 5 75 7.5 5.0 6.2 0.7 96 chr2R 9642420 intron Mmp2 - chr2R 9642468 intron Mmp2 - chr2R 9642516 intron Mmp2 - chr2R_5_9640001 chr2R_9640001 RAL-757 690 chr2R 9642431 9642435 chr2R 9642489 9642521 4 79 5.5 5.0 5.2 0.6 90 chr2R 9642431 intron Mmp2 - chr2R 9642476 intron Mmp2 - chr2R 9642521 intron Mmp2 - chr2R_4_9640001 chr2R_9640001 RAL-757 691 chr2R 9653256 9653288 chr2R 9653340 9653372 19 81 2.5 3.5 3.0 4.8 116 chr2R 9653256 intron Mmp2 - chr2R 9653314 intron Mmp2 - chr2R 9653372 intron Mmp2 - chr2R_19_9650001 chr2R_9650001 RAL-757 692 chr2R 9726612 9726643 chr2R 9734163 9734194 17.6 22 7550 5.0 6.0 5.5 3.4 7582 chr2R 9726612 intron sqa - chr2R 9730403 intron sqa - chr2R 9734194 intron sqa - chr2R_22_9730001 chr2R_9730001 RAL-757 693 chr2R 9790080 9790111 chr2R 9790153 9790177 16 75 6.0 4.5 5.2 2.6 97 chr2R 9790080 intron,5` UTR CG1688 -,CR44208 + chr2R 9790128 intron,5` UTR CG1688 -,CR44208 + chr2R 9790177 intron,5` UTR CG1688 -,CR44208 + chr2R_16_9790001 chr2R_9790001 RAL-757 694 chr2R 9871053 9871073 chr2R 9871527 9871559 roo 6 484 3.5 7.5 5.5 0.9 506 chr2R 9871053 intron cbx - chr2R 9871306 intron cbx - chr2R 9871559 intron,5` UTR cbx -,CG18446 + chr2R_6_9870001 chr2R_9870001 RAL-757 695 chr2R 9950311 9950327 chr2R 9950373 9950390 8 66 5.5 4.5 5.0 1.3 79 chr2R 9950311 intron Mef2 - chr2R 9950350 intron Mef2 - chr2R 9950390 intron Mef2 - chr2R_8_9950001 chr2R_9950001 RAL-757 696 chr2R 9975923 9975933 chr2R 9976038 9976048 5 115 9.0 1.5 5.2 0.8 125 chr2R 9975923 intergenic not near genes chr2R 9975986 intergenic not near genes chr2R 9976048 intergenic not near genes chr2R_5_9975001 chr2R_9975001 RAL-757 697 chr2R 9975936 9975946 chr2R 9976031 9976059 6 107 4.5 1.5 3.0 1.5 123 chr2R 9975936 intergenic not near genes chr2R 9975998 intergenic not near genes chr2R 9976059 intergenic not near genes chr2R_6_9975001 chr2R_9975001 RAL-757 698 chr2R 10017651 10017663 chr2R 10017730 10017741 4 78 9.5 8.5 9.0 0.4 90 chr2R 10017651 intron Pka-R2 - chr2R 10017696 intron Pka-R2 - chr2R 10017741 intron Pka-R2 - chr2R_4_10015001 chr2R_10015001 RAL-757 699 chr2R 10047812 10047843 chr2R 10047895 10047926 15 80 8.0 5.5 6.8 1.9 114 chr2R 10047812 intron oys - chr2R 10047869 intron oys - chr2R 10047926 intron oys - chr2R_15_10045001 chr2R_10045001 RAL-757 700 chr2R 10132213 10132218 chr2R 10132278 10132297 4 76 3.5 5.5 4.5 0.7 84 chr2R 10132213 intron gem + chr2R 10132255 intron gem + chr2R 10132297 intron gem + chr2R_4_10130001 chr2R_10130001 RAL-757 701 chr2R 10147644 10147674 chr2R 10147725 10147757 16 80 7.0 5.0 6.0 2.3 113 chr2R 10147644 intron KCNQ - chr2R 10147700 intron KCNQ - chr2R 10147757 intron KCNQ - chr2R_16_10145001 chr2R_10145001 RAL-757 702 chr2R 10176895 10176908 chr2R 10186044 10186044 roo 11 9161 5.5 5.5 5.5 1.7 9149 chr2R 10176895 intron KCNQ - chr2R 10181470 intron KCNQ - chr2R 10186044 intron KCNQ - chr2R_11_10180001 chr2R_10180001 RAL-757 703 chr2R 10257167 10257190 chr2R 10257258 10257267 12 86 4.5 3.5 4.0 2.4 100 chr2R 10257167 intron CG12911 + chr2R 10257217 intron CG12911 + chr2R 10257267 intron CG12911 + chr2R_12_10255001 chr2R_10255001 RAL-757 704 chr2R 10269569 10269597 chr2R 10269663 10269691 11 91 6.0 5.0 5.5 1.7 122 chr2R 10269569 intron CAP + chr2R 10269630 intron CAP + chr2R 10269691 intron CAP + chr2R_11_10265001 chr2R_10265001 RAL-757 705 chr2R 10303538 10303561 chr2R 10303631 10303660 15 97 4.0 3.5 3.8 3.1 122 chr2R 10303538 intron CAP + chr2R 10303599 intron CAP + chr2R 10303660 intron CAP + chr2R_15_10300001 chr2R_10300001 RAL-757 706 chr2R 10352679 10352693 chr2R 10352755 10352759 5 73 6.0 5.5 5.8 0.7 80 chr2R 10352679 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352719 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352759 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_5_10350001 chr2R_10350001 RAL-757 707 chr2R 10352696 10352704 chr2R 10352748 10352779 6 61 2.5 3.5 3.0 1.5 83 chr2R 10352696 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352738 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352779 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_6_10350001 chr2R_10350001 RAL-757 708 chr2R 10363862 10363899 chr2R 10363941 10363978 20 78 3.0 6.0 4.5 3.6 116 chr2R 10363862 intron CG42732 - chr2R 10363920 intron CG42732 - chr2R 10363978 intron CG42732 - chr2R_20_10360001 chr2R_10360001 RAL-757 709 chr2R 10385229 10385256 chr2R 10385339 10385366 7 108 0.0 2.5 1.2 3.2 137 chr2R 10385229 intron CG42732 - chr2R 10385298 intron CG42732 - chr2R 10385366 intron CG42732 - chr2R_7_10385001 chr2R_10385001 RAL-757 710 chr2R 10411828 10411836 chr2R 10411905 10411918 5 81 0.0 7.5 3.8 1.0 90 chr2R 10411828 intron CG42732 - chr2R 10411873 intron CG42732 - chr2R 10411918 intron CG42732 - chr2R_5_10410001 chr2R_10410001 RAL-757 711 chr2R 10417411 10417434 chr2R 10417535 10417558 7 126 36.0 41.5 38.8 0.2 147 chr2R 10417411 intergenic CG42732 - chr2R 10417484 intergenic CG42732 - chr2R 10417558 intergenic not near genes chr2R_7_10415001 chr2R_10415001 RAL-757 712 chr2R 10454097 10454119 chr2R 10454174 10454196 12 75 8.5 7.0 7.8 1.4 99 chr2R 10454097 intron,intron Galphao +,Cyp49a1 - chr2R 10454146 intron,intron Galphao +,Cyp49a1 - chr2R 10454196 intron,intron Galphao +,Cyp49a1 - chr2R_12_10450001 chr2R_10450001 RAL-757 713 chr2R 10454122 10454130 chr2R 10454173 10454184 5 67 5.5 6.5 6.0 0.7 62 chr2R 10454122 intron,intron Galphao +,Cyp49a1 - chr2R 10454153 intron,intron Galphao +,Cyp49a1 - chr2R 10454184 intron,intron Galphao +,Cyp49a1 - chr2R_5_10450001 chr2R_10450001 RAL-757 714 chr2R 10469032 10469053 chr2R 10469147 10469169 8 115 4.0 6.5 5.2 1.3 137 chr2R 10469032 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469169 intron CG11777 + chr2R_8_10465001 chr2R_10465001 RAL-757 715 chr2R 10574640 10574645 chr2R 10574702 10574727 4 77 4.5 6.5 5.5 0.6 87 chr2R 10574640 intron psq + chr2R 10574684 intron psq + chr2R 10574727 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-757 716 chr2R 10582120 10582146 chr2R 10582210 10582240 13 94 2.5 1.5 2.0 4.3 120 chr2R 10582120 intron psq + chr2R 10582180 intron psq + chr2R 10582240 intron psq + chr2R_13_10580001 chr2R_10580001 RAL-757 717 chr2R 10585574 10585589 chr2R 10594151 10594172 Tirant 10 8578 3.5 9.0 6.2 1.4 8598 chr2R 10585574 intron psq + chr2R 10589873 intron psq + chr2R 10594172 intron psq + chr2R_10_10585001 chr2R_10585001 RAL-757 718 chr2R 10622353 10622386 chr2R 10637117 10637140 mdg1 11 14761 2.0 10.5 6.2 1.5 14787 chr2R 10622353 intron CG11883 + chr2R 10629746 intron CG11883 + chr2R 10637140 intron CG11883 + chr2R_11_10625001 chr2R_10625001 RAL-757 719 chr2R 10743432 10743451 chr2R 10743515 10743534 8 80 3.5 9.0 6.2 1.1 102 chr2R 10743432 intron CG33144 - chr2R 10743483 intron CG33144 - chr2R 10743534 intron CG33144 - chr2R_8_10740001 chr2R_10740001 RAL-757 720 chr2R 10761557 10761585 chr2R 10761711 10761728 16 152 3.5 4.5 4.0 3.2 171 chr2R 10761557 intron,5` UTR CG33144 -,CR43605 + chr2R 10761642 intron,5` UTR CG33144 -,CR43605 + chr2R 10761728 intron CG33144 - chr2R_16_10760001 chr2R_10760001 RAL-757 721 chr2R 10768160 10768169 chr2R 10768231 10768235 4 78 4.0 7.5 5.8 0.6 75 chr2R 10768160 intron CG33144 - chr2R 10768198 intron CG33144 - chr2R 10768235 intron CG33144 - chr2R_4_10765001 chr2R_10765001 RAL-757 722 chr2R 10768170 10768173 chr2R 10768229 10768240 4 70 2.5 6.5 4.5 0.7 70 chr2R 10768170 intron CG33144 - chr2R 10768205 intron CG33144 - chr2R 10768240 intron CG33144 - chr2R_4_10765001 chr2R_10765001 RAL-757 723 chr2R 10830664 10830693 chr2R 10830737 10830770 13 69 2.0 3.0 2.5 3.7 106 chr2R 10830664 intron CG12344 - chr2R 10830717 intron CG12344 - chr2R 10830770 intron CG12344 - chr2R_13_10830001 chr2R_10830001 RAL-757 724 chr2R 10862575 10862578 chr2R 10862684 10862689 6 110 8.0 7.0 7.5 0.7 114 chr2R 10862575 intron CG30015 - chr2R 10862632 intron CG30015 - chr2R 10862689 intron CG30015 - chr2R_6_10860001 chr2R_10860001 RAL-757 725 chr2R 10862579 10862601 chr2R 10862680 10862711 12 109 3.0 5.5 4.2 2.3 132 chr2R 10862579 intron CG30015 - chr2R 10862645 intron CG30015 - chr2R 10862711 intron CG30015 - chr2R_12_10860001 chr2R_10860001 RAL-757 726 chr2R 10865637 10865653 chr2R 15097653 15097655 5 4232012 15.5 15.0 15.2 0.3 4232018 chr2R 10865637 intron CG30015 - chr2R 12981646 intergenic not near genes chr2R 15097655 intergenic not near genes chr2R_5_12980001 chr2R_12980001 RAL-757 727 chr2R 10922785 10922790 chr2R 10922858 10922872 4 82 0.5 7.5 4.0 0.8 87 chr2R 10922785 intergenic not near genes chr2R 10922828 intergenic not near genes chr2R 10922872 intergenic not near genes chr2R_4_10920001 chr2R_10920001 RAL-757 728 chr2R 10937809 10937832 chr2R 10937935 10937970 15 134 1.0 4.5 2.8 3.9 161 chr2R 10937809 intergenic not near genes chr2R 10937890 intergenic not near genes chr2R 10937970 intergenic Spn47C - chr2R_15_10935001 chr2R_10935001 RAL-757 729 chr2R 10947092 10947100 chr2R 10947179 10947187 7 86 9.5 0.0 4.8 1.2 95 chr2R 10947092 5` UTR CR45228 + chr2R 10947140 intergenic CR45228 + chr2R 10947187 intergenic CR45228 + chr2R_7_10945001 chr2R_10945001 RAL-757 730 chr2R 10948051 10948061 chr2R 10955576 10955612 17.6 4 7538 4.5 1.0 2.8 1.1 7561 chr2R 10948051 intergenic not near genes chr2R 10951832 intergenic not near genes chr2R 10955612 intergenic not near genes chr2R_4_10950001 chr2R_10950001 RAL-757 731 chr2R 10967391 10967404 chr2R 10967562 10967571 6 170 3.0 3.5 3.2 1.4 180 chr2R 10967391 intergenic not near genes chr2R 10967481 intergenic not near genes chr2R 10967571 intergenic not near genes chr2R_6_10965001 chr2R_10965001 RAL-757 732 chr2R 11009816 11009847 chr2R 11018986 11019015 roo 12 9164 3.5 4.0 3.8 2.5 9199 chr2R 11009816 intron luna - chr2R 11014416 intron luna - chr2R 11019015 intron luna - chr2R_12_11010001 chr2R_11010001 RAL-757 733 chr2R 11019890 11019908 chr2R 11024939 11024974 jockey 8 5058 3.0 3.5 3.2 1.9 5084 chr2R 11019890 intron luna - chr2R 11022432 intron luna - chr2R 11024974 intron luna - chr2R_8_11020001 chr2R_11020001 RAL-757 734 chr2R 11039724 11039759 chr2R 11039808 11039828 7 79 1.0 0.0 0.5 4.7 104 chr2R 11039724 intron luna - chr2R 11039776 intron luna - chr2R 11039828 intron luna - chr2R_7_11035001 chr2R_11035001 RAL-757 735 chr2R 11118173 11118177 chr2R 11118245 11118251 4 75 0.0 7.5 3.8 0.8 78 chr2R 11118173 3` UTR Cyp12d1-p - chr2R 11118212 3` UTR Cyp12d1-p - chr2R 11118251 3` UTR Cyp12d1-p - chr2R_4_11115001 chr2R_11115001 RAL-757 736 chr2R 11144297 11144313 chr2R 11144388 11144407 9 97 4.0 0.5 2.2 2.8 110 chr2R 11144297 intron CG13229 - chr2R 11144352 intron CG13229 - chr2R 11144407 intron CG13229 - chr2R_9_11140001 chr2R_11140001 RAL-757 737 chr2R 11150186 11150195 chr2R 11150262 11150271 7 75 6.0 4.5 5.2 1.1 85 chr2R 11150186 intron CG13229 - chr2R 11150228 intron CG13229 - chr2R 11150271 intron CG13229 - chr2R_7_11150001 chr2R_11150001 RAL-757 738 chr2R 11171530 11171560 chr2R 11171687 11171717 8 155 5.0 3.5 4.2 1.5 187 chr2R 11171530 intron,intron CG13229 -,shn + chr2R 11171624 intron,intron CG13229 -,shn + chr2R 11171717 intron,intron CG13229 -,shn + chr2R_8_11170001 chr2R_11170001 RAL-757 739 chr2R 11179270 11179299 chr2R 11179355 11179357 10 80 8.5 14.0 11.2 0.8 87 chr2R 11179270 intron shn + chr2R 11179314 intron shn + chr2R 11179357 intron shn + chr2R_10_11175001 chr2R_11175001 RAL-757 740 chr2R 11207823 11207840 chr2R 11208012 11208026 BS 10 189 8.5 10.0 9.2 1.0 203 chr2R 11207823 intron shn + chr2R 11207924 intron shn + chr2R 11208026 intron shn + chr2R_10_11205001 chr2R_11205001 RAL-757 741 chr2R 11207841 11207846 chr2R 11208007 11208036 BS 5 180 7.5 9.5 8.5 0.5 195 chr2R 11207841 intron shn + chr2R 11207938 intron shn + chr2R 11208036 intron shn + chr2R_5_11205001 chr2R_11205001 RAL-757 742 chr2R 11265724 11265742 chr2R 11265806 11265824 4 82 5.0 0.0 2.5 1.1 100 chr2R 11265724 exon Cpr47Ee + chr2R 11265774 intron Cpr47Ee + chr2R 11265824 intron Cpr47Ee + chr2R_4_11265001 chr2R_11265001 RAL-757 743 chr2R 11292974 11292985 chr2R 11293047 11293064 6 74 5.5 1.5 3.5 1.3 90 chr2R 11292974 exon,3` UTR dare -,CG30033 + chr2R 11293019 5` UTR,3` UTR dare -,CG30033 + chr2R 11293064 5` UTR,3` UTR dare -,CG30033 + chr2R_6_11290001 chr2R_11290001 RAL-757 744 chr2R 11292987 11292999 chr2R 11293046 11293059 10 64 4.5 1.5 3.0 2.5 72 chr2R 11292987 exon,3` UTR dare -,CG30033 + chr2R 11293023 5` UTR,3` UTR dare -,CG30033 + chr2R 11293059 5` UTR,3` UTR dare -,CG30033 + chr2R_10_11290001 chr2R_11290001 RAL-757 745 chr2R 11297623 11297645 chr2R 11301944 11301958 flea 11 4320 7.0 6.0 6.5 1.5 4335 chr2R 11297623 intergenic CG42336 - chr2R 11299790 intergenic not near genes chr2R 11301958 5` UTR CG7741 + chr2R_11_11295001 chr2R_11295001 RAL-757 746 chr2R 11344148 11344181 chr2R 11344244 11344273 5 94 0.0 4.5 2.2 1.6 125 chr2R 11344148 intergenic alphaTry - chr2R 11344210 intergenic alphaTry - chr2R 11344273 3` UTR alphaTry - chr2R_5_11340001 chr2R_11340001 RAL-757 747 chr2R 11472649 11472664 chr2R 11473846 11473860 pogo 7 1196 12.0 5.0 8.5 0.7 1211 chr2R 11472649 intergenic not near genes chr2R 11473254 intergenic not near genes chr2R 11473860 intergenic not near genes chr2R_7_11470001 chr2R_11470001 RAL-757 748 chr2R 11472669 11472679 chr2R 11473845 11473876 pogo 4 1184 5.0 4.5 4.8 0.7 1207 chr2R 11472669 intergenic not near genes chr2R 11473272 intergenic not near genes chr2R 11473876 intergenic not near genes chr2R_4_11470001 chr2R_11470001 RAL-757 749 chr2R 11485118 11485147 chr2R 11485200 11485221 6 77 2.5 7.0 4.8 1.0 103 chr2R 11485118 intron inv + chr2R 11485170 intron inv + chr2R 11485221 intron inv + chr2R_6_11485001 chr2R_11485001 RAL-757 750 chr2R 11487039 11487054 chr2R 11487364 11487381 4 325 4.5 3.5 4.0 0.8 342 chr2R 11487039 intron inv + chr2R 11487210 intron inv + chr2R 11487381 intron inv + chr2R_4_11485001 chr2R_11485001 RAL-757 751 chr2R 11630479 11630507 chr2R 11630895 11630915 20 413 4.5 4.0 4.2 3.8 436 chr2R 11630479 intron CG9005 - chr2R 11630697 intron CG9005 - chr2R 11630915 intron CG9005 - chr2R_20_11630001 chr2R_11630001 RAL-757 752 chr2R 11677875 11677897 chr2R 11677953 11677975 4 75 2.5 2.5 2.5 1.1 100 chr2R 11677875 intron,exon Roc2 -,Tret1-2 + chr2R 11677925 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677975 intron,3` UTR Roc2 -,Tret1-2 + chr2R_4_11675001 chr2R_11675001 RAL-757 753 chr2R 11724178 11724190 chr2R 11724246 11724273 10 79 0.0 3.5 1.8 3.6 95 chr2R 11724178 intron pyr + chr2R 11724226 intron pyr + chr2R 11724273 intron pyr + chr2R_10_11720001 chr2R_11720001 RAL-757 754 chr2R 11922743 11922770 chr2R 11922822 11922849 10 77 3.5 5.0 4.2 1.9 106 chr2R 11922743 intergenic not near genes chr2R 11922796 intergenic not near genes chr2R 11922849 intergenic not near genes chr2R_10_11920001 chr2R_11920001 RAL-757 755 chr2R 11928700 11928703 chr2R 11928768 11928781 4 76 0.0 4.0 2.0 1.3 81 chr2R 11928700 intergenic not near genes chr2R 11928740 intergenic not near genes chr2R 11928781 intergenic CR44312 - chr2R_4_11925001 chr2R_11925001 RAL-757 756 chr2R 11932322 11932330 chr2R 11932417 11932426 4 96 6.5 1.5 4.0 0.8 104 chr2R 11932322 intergenic not near genes chr2R 11932374 intergenic not near genes chr2R 11932426 intergenic not near genes chr2R_4_11930001 chr2R_11930001 RAL-757 757 chr2R 12073395 12073428 chr2R 12073484 12073513 13 83 3.0 2.5 2.8 3.4 118 chr2R 12073395 intron CG8888 - chr2R 12073454 intron CG8888 - chr2R 12073513 intron CG8888 - chr2R_13_12070001 chr2R_12070001 RAL-757 758 chr2R 12186001 12186036 chr2R 12186095 12186115 17 86 8.0 9.0 8.5 1.8 114 chr2R 12186001 intron Cyp6g1 + chr2R 12186058 intron Cyp6g1 + chr2R 12186115 intron Cyp6g1 + chr2R_17_12185001 chr2R_12185001 RAL-757 759 chr2R 12187473 12187494 chr2R 12190091 12190124 20 2624 88.0 64.5 76.2 0.3 2651 chr2R 12187473 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_20_12185001 chr2R_12185001 RAL-757 760 chr2R 12217577 12217602 chr2R 12217658 12217683 6 78 1.0 5.5 3.2 1.4 106 chr2R 12217577 intergenic not near genes chr2R 12217630 intergenic not near genes chr2R 12217683 intergenic not near genes chr2R_6_12215001 chr2R_12215001 RAL-757 761 chr2R 12228374 12228381 chr2R 12228493 12228498 4 118 1.5 7.0 4.2 0.8 124 chr2R 12228374 intron CG8854 - chr2R 12228436 intron CG8854 - chr2R 12228498 intron CG8854 - chr2R_4_12225001 chr2R_12225001 RAL-757 762 chr2R 12228383 12228405 chr2R 12228492 12228507 17 116 1.0 6.5 3.8 3.5 124 chr2R 12228383 intron CG8854 - chr2R 12228445 intron CG8854 - chr2R 12228507 intron CG8854 - chr2R_17_12225001 chr2R_12225001 RAL-757 763 chr2R 12285396 12285410 chr2R 12285488 12285507 14 96 3.0 1.5 2.2 4.4 111 chr2R 12285396 intron CG42700 + chr2R 12285452 intron CG42700 + chr2R 12285507 intron CG42700 + chr2R_14_12285001 chr2R_12285001 RAL-757 764 chr2R 12334887 12334907 chr2R 12334960 12334969 8 73 7.0 8.0 7.5 0.9 82 chr2R 12334887 intergenic CG8490 + chr2R 12334928 intergenic CG8490 + chr2R 12334969 intergenic CG8490 + chr2R_8_12330001 chr2R_12330001 RAL-757 765 chr2R 12548530 12548552 chr2R 12548601 12548629 11 73 0.0 9.5 4.8 1.9 99 chr2R 12548530 intron fra + chr2R 12548580 intron fra + chr2R 12548629 intron fra + chr2R_11_12545001 chr2R_12545001 RAL-757 766 chr2R 12565565 12565576 chr2R 12565943 12565954 7 377 1.5 1.5 1.5 2.8 389 chr2R 12565565 intergenic not near genes chr2R 12565760 intergenic Cyp301a1 + chr2R 12565954 intergenic Cyp301a1 + chr2R_7_12565001 chr2R_12565001 RAL-757 767 chr2R 12593133 12593141 chr2R 12593215 12593223 6 81 8.0 4.0 6.0 0.9 90 chr2R 12593133 intergenic CR45279 -,Sin3A -,Amph + chr2R 12593178 intergenic CR45279 -,Sin3A -,Amph + chr2R 12593223 3` UTR CR45279 - chr2R_6_12590001 chr2R_12590001 RAL-757 768 chr2R 12593144 12593163 chr2R 12593213 12593245 18 78 3.0 3.5 3.2 4.3 101 chr2R 12593144 intergenic CR45279 -,Sin3A -,Amph + chr2R 12593194 3` UTR CR45279 - chr2R 12593245 3` UTR CR45279 - chr2R_18_12590001 chr2R_12590001 RAL-757 769 chr2R 12695242 12695268 chr2R 12695328 12695354 10 83 3.0 0.5 1.8 3.6 112 chr2R 12695242 intergenic not near genes chr2R 12695298 intergenic not near genes chr2R 12695354 intergenic not near genes chr2R_10_12695001 chr2R_12695001 RAL-757 770 chr2R 12706418 12706446 chr2R 12706510 12706527 8 86 4.0 2.5 3.2 1.9 109 chr2R 12706418 intron CG42663 + chr2R 12706472 intron CG42663 + chr2R 12706527 intron CG42663 + chr2R_8_12705001 chr2R_12705001 RAL-757 771 chr2R 12707524 12707526 chr2R 12715890 12715892 roo 4 8366 9.5 2.0 5.8 0.6 8368 chr2R 12707524 intron CG42663 + chr2R 12711708 intron CG42663 + chr2R 12715892 intron CG42663 + chr2R_4_12710001 chr2R_12710001 RAL-757 772 chr2R 12707533 12707546 chr2R 12715889 12715912 roo 4 8364 2.0 2.0 2.0 1.3 8379 chr2R 12707533 intron CG42663 + chr2R 12711722 intron CG42663 + chr2R 12715912 intron CG42663 + chr2R_4_12710001 chr2R_12710001 RAL-757 773 chr2R 12726327 12726353 chr2R 12726418 12726432 11 90 4.0 5.5 4.8 1.9 105 chr2R 12726327 intron CG42663 + chr2R 12726380 intron CG42663 + chr2R 12726432 intron CG42663 + chr2R_11_12725001 chr2R_12725001 RAL-757 774 chr2R 12728888 12728906 chr2R 12728988 12729008 4 101 0.0 4.0 2.0 1.3 120 chr2R 12728888 intron CG42663 + chr2R 12728948 intron CG42663 + chr2R 12729008 intron CG42663 + chr2R_4_12725001 chr2R_12725001 RAL-757 775 chr2R 12789294 12789326 chr2R 12797657 12797680 roo 4 8361 3.0 4.0 3.5 0.9 8386 chr2R 12789294 intron,3` UTR sca +,CR45137 - chr2R 12793487 intron,intron sca +,CR45137 - chr2R 12797680 intron,3` UTR sca +,CR45137 - chr2R_4_12790001 chr2R_12790001 RAL-757 776 chr2R 12836391 12836417 chr2R 12836477 12836498 9 82 3.0 5.0 4.0 1.8 107 chr2R 12836391 intergenic not near genes chr2R 12836444 intergenic not near genes chr2R 12836498 intergenic not near genes chr2R_9_12835001 chr2R_12835001 RAL-757 777 chr2R 12897463 12897482 chr2R 12897553 12897573 7 90 3.0 0.5 1.8 2.5 110 chr2R 12897463 intron vg + chr2R 12897518 intron vg + chr2R 12897573 intron vg + chr2R_7_12895001 chr2R_12895001 RAL-757 778 chr2R 13043062 13043064 chr2R 13043139 13043143 5 79 0.0 4.0 2.0 1.7 81 chr2R 13043062 intergenic not near genes chr2R 13043102 intergenic not near genes chr2R 13043143 intergenic not near genes chr2R_5_13040001 chr2R_13040001 RAL-757 779 chr2R 13136843 13136870 chr2R 13141632 13141659 Doc 7 4787 3.0 3.5 3.2 1.7 4816 chr2R 13136843 exon Cap-G + chr2R 13139251 intron Cap-G + chr2R 13141659 intron Cap-G + chr2R_7_13135001 chr2R_13135001 RAL-757 780 chr2R 13170719 13170751 chr2R 13170807 13170827 14 86 9.0 11.0 10.0 1.3 108 chr2R 13170719 3` UTR,3` UTR Spt-I +,CR45142 - chr2R 13170773 intergenic CR45142 -,Spt-I + chr2R 13170827 intergenic CR45142 -,Spt-I + chr2R_14_13170001 chr2R_13170001 RAL-757 781 chr2R 13218307 13218398 chr2R 13218387 13218474 11 80 0.0 0.0 0.0 11.0 167 chr2R 13218307 intron CG4630 - chr2R 13218390 intron CG4630 - chr2R 13218474 intron CG4630 - chr2R_11_13215001 chr2R_13215001 RAL-757 782 chr2R 13302583 13302585 chr2R 13302661 13302663 4 78 6.5 2.5 4.5 0.7 80 chr2R 13302583 intergenic not near genes chr2R 13302623 intergenic not near genes chr2R 13302663 intergenic not near genes chr2R_4_13300001 chr2R_13300001 RAL-757 783 chr2R 13302587 13302601 chr2R 13302655 13302673 8 72 5.0 2.5 3.8 1.7 86 chr2R 13302587 intergenic not near genes chr2R 13302630 intergenic not near genes chr2R 13302673 intergenic not near genes chr2R_8_13300001 chr2R_13300001 RAL-757 784 chr2R 13372662 13372676 chr2R 13372743 13372757 6 81 5.0 1.5 3.2 1.4 95 chr2R 13372662 intergenic not near genes chr2R 13372710 intergenic not near genes chr2R 13372757 intergenic not near genes chr2R_6_13370001 chr2R_13370001 RAL-757 785 chr2R 13403921 13403936 chr2R 13404006 13404021 9 82 2.0 4.5 3.2 2.1 100 chr2R 13403921 intergenic not near genes chr2R 13403971 intergenic not near genes chr2R 13404021 intergenic not near genes chr2R_9_13400001 chr2R_13400001 RAL-757 786 chr2R 13439110 13439228 chr2R 13439224 13439304 12 113 0.0 0.0 0.0 12.0 194 chr2R 13439110 intergenic CG42321 -,cnn - chr2R 13439207 intergenic cnn -,CG42321 - chr2R 13439304 intergenic cnn -,CG42321 - chr2R_12_13435001 chr2R_13435001 RAL-757 787 chr2R 13532517 13532543 chr2R 13532633 13532659 12 116 2.5 2.5 2.5 3.4 142 chr2R 13532517 intron Vmat - chr2R 13532588 intron Vmat - chr2R 13532659 intron Vmat - chr2R_12_13530001 chr2R_13530001 RAL-757 788 chr2R 13547082 13547109 chr2R 13547276 13547304 11 195 3.0 5.0 4.0 2.2 222 chr2R 13547082 intron CG6145 - chr2R 13547193 intron CG6145 - chr2R 13547304 intron CG6145 - chr2R_11_13545001 chr2R_13545001 RAL-757 789 chr2R 13554765 13554770 chr2R 13554842 13554855 4 80 0.0 7.5 3.8 0.8 90 chr2R 13554765 intron Roe1 + chr2R 13554810 intron Roe1 + chr2R 13554855 intron Roe1 + chr2R_4_13550001 chr2R_13550001 RAL-757 790 chr2R 13557267 13557301 chr2R 13557353 13557387 22 85 6.5 5.0 5.8 3.2 120 chr2R 13557267 3` UTR link + chr2R 13557327 3` UTR link + chr2R 13557387 intergenic link +,snoRNA:Psi28S-1153 -,snoRNA:2R:9445205 - chr2R_22_13555001 chr2R_13555001 RAL-757 791 chr2R 13580512 13580524 chr2R 13580844 13580874 jockey 4 345 4.5 6.5 5.5 0.6 362 chr2R 13580512 3` UTR CG6191 - chr2R 13580693 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580874 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 RAL-757 792 chr2R 13649997 13650028 chr2R 13650092 13650123 5 89 4.0 0.0 2.0 1.7 126 chr2R 13649997 intron fas + chr2R 13650060 intron fas + chr2R 13650123 intron fas + chr2R_5_13650001 chr2R_13650001 RAL-757 793 chr2R 13728136 13728166 chr2R 13735791 13735811 opus 15 7655 6.0 4.5 5.2 2.4 7675 chr2R 13728136 intron fas + chr2R 13731974 intron fas + chr2R 13735811 intron fas + chr2R_15_13730001 chr2R_13730001 RAL-757 794 chr2R 13768988 13769005 chr2R 13769087 13769104 6 97 6.5 5.5 6.0 0.9 116 chr2R 13768988 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769104 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-757 795 chr2R 13798928 13798961 chr2R 13799010 13799043 15 80 5.0 5.0 5.0 2.5 115 chr2R 13798928 intron Cpr50Cb + chr2R 13798986 intron Cpr50Cb + chr2R 13799043 intron Cpr50Cb + chr2R_15_13795001 chr2R_13795001 RAL-757 796 chr2R 13868893 13868928 chr2R 13868972 13869007 23 77 4.5 5.5 5.0 3.8 114 chr2R 13868893 intron shot - chr2R 13868950 intron shot - chr2R 13869007 intron shot - chr2R_23_13865001 chr2R_13865001 RAL-757 797 chr2R 13905600 13905637 chr2R 13907582 13907602 Rt1a 11 1976 6.0 3.5 4.8 1.9 2002 chr2R 13905600 intron shot - chr2R 13906601 intron shot - chr2R 13907602 intron shot - chr2R_11_13905001 chr2R_13905001 RAL-757 798 chr2R 13914282 13914302 chr2R 13914360 13914368 15 83 3.0 6.0 4.5 2.7 86 chr2R 13914282 intron shot - chr2R 13914325 intron shot - chr2R 13914368 intron shot - chr2R_15_13910001 chr2R_13910001 RAL-757 799 chr2R 13924234 13924269 chr2R 13924334 13924337 9 94 2.5 0.5 1.5 3.6 103 chr2R 13924234 intron shot - chr2R 13924286 intron shot - chr2R 13924337 intron shot - chr2R_9_13920001 chr2R_13920001 RAL-757 800 chr2R 13925848 13925866 chr2R 13926024 13926030 13 174 8.5 7.0 7.8 1.5 182 chr2R 13925848 intron shot - chr2R 13925939 intron shot - chr2R 13926030 intron shot - chr2R_13_13925001 chr2R_13925001 RAL-757 801 chr2R 14018163 14018190 chr2R 14018237 14018269 18 80 4.0 0.5 2.2 5.6 106 chr2R 14018163 intron mam + chr2R 14018216 intron mam + chr2R 14018269 intron mam + chr2R_18_14015001 chr2R_14015001 RAL-757 802 chr2R 14021899 14021936 chr2R 14021988 14022020 17 87 3.0 1.5 2.2 5.3 121 chr2R 14021899 intron mam + chr2R 14021960 intron mam + chr2R 14022020 intron mam + chr2R_17_14020001 chr2R_14020001 RAL-757 803 chr2R 14037271 14037298 chr2R 14037354 14037374 5 79 0.0 5.5 2.8 1.3 103 chr2R 14037271 intron mam + chr2R 14037322 intron mam + chr2R 14037374 intron mam + chr2R_5_14035001 chr2R_14035001 RAL-757 804 chr2R 14141953 14141972 chr2R 14142058 14142062 5 102 9.0 8.0 8.5 0.5 109 chr2R 14141953 intergenic not near genes chr2R 14142008 intergenic not near genes chr2R 14142062 intergenic not near genes chr2R_5_14140001 chr2R_14140001 RAL-757 805 chr2R 14168374 14168393 chr2R 14168463 14168482 7 88 4.5 3.5 4.0 1.4 108 chr2R 14168374 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168428 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168482 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_7_14165001 chr2R_14165001 RAL-757 806 chr2R 14171473 14171498 chr2R 14171563 14171588 11 90 6.0 4.5 5.2 1.8 115 chr2R 14171473 intron CG8331 + chr2R 14171530 intron CG8331 + chr2R 14171588 intron CG8331 + chr2R_11_14170001 chr2R_14170001 RAL-757 807 chr2R 14266765 14266787 chr2R 14266841 14266859 7 72 7.0 3.0 5.0 1.2 94 chr2R 14266765 intron CG8547 - chr2R 14266812 intron CG8547 - chr2R 14266859 intron CG8547 - chr2R_7_14265001 chr2R_14265001 RAL-757 808 chr2R 14342222 14342244 chr2R 14342298 14342319 9 74 5.0 6.5 5.8 1.3 97 chr2R 14342222 intron Shroom + chr2R 14342270 intron Shroom + chr2R 14342319 intron Shroom + chr2R_9_14340001 chr2R_14340001 RAL-757 809 chr2R 14393866 14393898 chr2R 14393950 14393975 16 79 8.5 2.5 5.5 2.5 109 chr2R 14393866 intergenic not near genes chr2R 14393920 intergenic not near genes chr2R 14393975 intergenic not near genes chr2R_16_14390001 chr2R_14390001 RAL-757 810 chr2R 14394236 14394250 chr2R 14399022 14399037 Doc 9 4787 7.0 11.0 9.0 0.9 4801 chr2R 14394236 intergenic not near genes chr2R 14396636 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_9_14395001 chr2R_14395001 RAL-757 811 chr2R 14400533 14400542 chr2R 14400612 14400621 5 78 7.0 8.0 7.5 0.6 88 chr2R 14400533 intergenic not near genes chr2R 14400577 intergenic not near genes chr2R 14400621 intergenic not near genes chr2R_5_14400001 chr2R_14400001 RAL-757 812 chr2R 14400543 14400551 chr2R 14400603 14400611 5 70 5.5 7.0 6.2 0.7 68 chr2R 14400543 intergenic not near genes chr2R 14400577 intergenic not near genes chr2R 14400611 intergenic not near genes chr2R_5_14400001 chr2R_14400001 RAL-757 813 chr2R 14467308 14467327 chr2R 14476466 14476470 roo 4 9153 5.0 5.0 5.0 0.7 9162 chr2R 14467308 intergenic not near genes chr2R 14471889 intergenic not near genes chr2R 14476470 5` UTR CR44462 + chr2R_4_14470001 chr2R_14470001 RAL-757 814 chr2R 14521707 14521732 chr2R 14522054 14522076 4 342 6.5 8.5 7.5 0.5 369 chr2R 14521707 intergenic not near genes chr2R 14521892 intergenic not near genes chr2R 14522076 intergenic not near genes chr2R_4_14520001 chr2R_14520001 RAL-757 815 chr2R 14538969 14538991 chr2R 14539044 14539067 6 76 2.5 3.5 3.0 1.5 98 chr2R 14538969 intron ttv + chr2R 14539018 intron ttv + chr2R 14539067 intron ttv + chr2R_6_14535001 chr2R_14535001 RAL-757 816 chr2R 14623883 14623890 chr2R 14623969 14623986 6 90 1.0 0.5 0.8 3.3 103 chr2R 14623883 intron Uhg5 + chr2R 14623934 5` UTR Uhg5 + chr2R 14623986 intron Uhg5 + chr2R_6_14620001 chr2R_14620001 RAL-757 817 chr2R 14698059 14698069 chr2R 14698161 14698162 4 100 8.5 5.0 6.8 0.5 103 chr2R 14698059 intron mspo - chr2R 14698110 intron mspo - chr2R 14698162 intron mspo - chr2R_4_14695001 chr2R_14695001 RAL-757 818 chr2R 14698071 14698080 chr2R 14698159 14698183 6 99 7.0 5.0 6.0 0.9 112 chr2R 14698071 intron mspo - chr2R 14698127 intron mspo - chr2R 14698183 intron mspo - chr2R_6_14695001 chr2R_14695001 RAL-757 819 chr2R 14728191 14728211 chr2R 14728267 14728283 9 76 2.5 6.5 4.5 1.6 92 chr2R 14728191 intergenic not near genes chr2R 14728237 intergenic not near genes chr2R 14728283 intergenic not near genes chr2R_9_14725001 chr2R_14725001 RAL-757 820 chr2R 14799866 14799897 chr2R 14799942 14799967 13 72 2.5 8.5 5.5 2.0 101 chr2R 14799866 intron kn - chr2R 14799916 intron kn - chr2R 14799967 intron kn - chr2R_13_14795001 chr2R_14795001 RAL-757 821 chr2R 14889207 14889241 chr2R 14897815 14897828 Max-element 23 8601 9.5 0.5 5.0 3.8 8621 chr2R 14889207 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897828 intergenic not near genes chr2R_23_14890001 chr2R_14890001 RAL-757 822 chr2R 14911700 14911726 chr2R 14911823 14911849 17 121 7.0 6.5 6.8 2.2 149 chr2R 14911700 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911849 intron CG10249 - chr2R_17_14910001 chr2R_14910001 RAL-757 823 chr2R 14919046 14919177 chr2R 14919126 14919286 13 85 1.5 3.0 2.2 4.1 240 chr2R 14919046 intron CG10249 - chr2R 14919166 intron CG10249 - chr2R 14919286 intron CG10249 - chr2R_13_14915001 chr2R_14915001 RAL-757 824 chr2R 14922153 14922157 chr2R 14922218 14922233 9 74 14.5 4.0 9.2 0.9 80 chr2R 14922153 intron CG10249 - chr2R 14922193 intron CG10249 - chr2R 14922233 intron CG10249 - chr2R_9_14920001 chr2R_14920001 RAL-757 825 chr2R 14922158 14922174 chr2R 14922217 14922235 14 69 6.5 3.5 5.0 2.3 77 chr2R 14922158 intron CG10249 - chr2R 14922196 intron CG10249 - chr2R 14922235 intron CG10249 - chr2R_14_14920001 chr2R_14920001 RAL-757 826 chr2R 14934456 14934479 chr2R 14934544 14934551 6 85 2.5 0.0 1.2 2.7 95 chr2R 14934456 intron CG10253 - chr2R 14934504 intron CG10253 - chr2R 14934551 intron CG10253 - chr2R_6_14930001 chr2R_14930001 RAL-757 827 chr2R 14955197 14955230 chr2R 14955347 14955380 13 146 3.0 7.0 5.0 2.2 183 chr2R 14955197 intron aPKC - chr2R 14955288 intron aPKC - chr2R 14955380 intron aPKC - chr2R_13_14955001 chr2R_14955001 RAL-757 828 chr2R 14955671 14955702 chr2R 14955753 14955791 14 86 2.5 0.0 1.2 6.4 120 chr2R 14955671 intron aPKC - chr2R 14955731 intron aPKC - chr2R 14955791 intron aPKC - chr2R_14_14955001 chr2R_14955001 RAL-757 829 chr2R 14979762 14979792 chr2R 14979838 14979868 8 75 5.5 6.5 6.0 1.1 106 chr2R 14979762 3` UTR ckn + chr2R 14979815 3` UTR ckn + chr2R 14979868 3` UTR ckn + chr2R_8_14975001 chr2R_14975001 RAL-757 830 chr2R 15004726 15004734 chr2R 15005055 15005058 jockey 5 328 10.0 8.0 9.0 0.5 332 chr2R 15004726 intergenic not near genes chr2R 15004892 intergenic not near genes chr2R 15005058 intergenic not near genes chr2R_5_15000001 chr2R_15000001 RAL-757 831 chr2R 15004736 15004757 chr2R 15005054 15005086 jockey 11 326 4.0 8.0 6.0 1.6 350 chr2R 15004736 intergenic not near genes chr2R 15004911 intergenic not near genes chr2R 15005086 intergenic not near genes chr2R_11_15000001 chr2R_15000001 RAL-757 832 chr2R 15015454 15015490 chr2R 15022878 15022906 mdg1 24 7421 2.5 3.5 3.0 6.0 7452 chr2R 15015454 intron hbs + chr2R 15019180 intron hbs + chr2R 15022906 intron hbs + chr2R_24_15015001 chr2R_15015001 RAL-757 833 chr2R 15119335 15119351 chr2R 15127798 15127810 Tirant 5 8469 3.0 5.0 4.0 1.0 8475 chr2R 15119335 intron chn + chr2R 15123572 intron chn + chr2R 15127810 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-757 834 chr2R 15133491 15133503 chr2R 15133561 15133574 8 74 1.0 2.0 1.5 3.2 83 chr2R 15133491 intron chn + chr2R 15133532 intron chn + chr2R 15133574 intron chn + chr2R_8_15130001 chr2R_15130001 RAL-757 835 chr2R 15137972 15138000 chr2R 15138047 15138048 11 72 5.5 0.5 3.0 2.8 76 chr2R 15137972 intron chn + chr2R 15138010 intron chn + chr2R 15138048 intron chn + chr2R_11_15135001 chr2R_15135001 RAL-757 836 chr2R 15375352 15375361 chr2R 15376169 15376178 4 817 4.0 5.5 4.8 0.7 826 chr2R 15375352 intergenic not near genes chr2R 15375765 intergenic not near genes chr2R 15376178 intergenic dup - chr2R_4_15375001 chr2R_15375001 RAL-757 837 chr2R 15498165 15498194 chr2R 15498246 15498275 4 80 2.0 0.0 1.0 2.0 110 chr2R 15498165 intergenic not near genes chr2R 15498220 intergenic not near genes chr2R 15498275 intergenic not near genes chr2R_4_15495001 chr2R_15495001 RAL-757 838 chr2R 15534681 15534698 chr2R 15534757 15534777 8 78 2.5 8.0 5.2 1.3 96 chr2R 15534681 intron CG30471 + chr2R 15534729 intron CG30471 + chr2R 15534777 intron CG30471 + chr2R_8_15530001 chr2R_15530001 RAL-757 839 chr2R 15655984 15656014 chr2R 15656064 15656084 18 77 4.0 8.5 6.2 2.5 100 chr2R 15655984 intron CG42524 + chr2R 15656034 intron CG42524 + chr2R 15656084 intron CG42524 + chr2R_18_15655001 chr2R_15655001 RAL-757 840 chr2R 15679108 15679130 chr2R 15679192 15679214 11 82 6.0 6.0 6.0 1.6 106 chr2R 15679108 intergenic CG8207 -,Vha14-1 - chr2R 15679161 intergenic CG8207 -,Vha14-1 - chr2R 15679214 intergenic Vha14-1 -,CG8207 - chr2R_11_15675001 chr2R_15675001 RAL-757 841 chr2R 15697891 15697926 chr2R 15697971 15698007 18 79 1.0 1.5 1.2 8.2 116 chr2R 15697891 exon CG33462 + chr2R 15697949 3` UTR CG33462 + chr2R 15698007 3` UTR CG33462 + chr2R_18_15695001 chr2R_15695001 RAL-757 842 chr2R 15794869 15794900 chr2R 15794959 15794990 4 90 3.0 0.0 1.5 1.6 121 chr2R 15794869 intron,5` UTR Zasp52 -,tun + chr2R 15794930 intron,5` UTR Zasp52 -,tun + chr2R 15794990 intron,intron Zasp52 -,tun + chr2R_4_15790001 chr2R_15790001 RAL-757 843 chr2R 15891828 15891836 chr2R 15891901 15891906 6 74 3.0 6.5 4.8 1.0 78 chr2R 15891828 intron sli - chr2R 15891867 intron sli - chr2R 15891906 intron sli - chr2R_6_15890001 chr2R_15890001 RAL-757 844 chr2R 15987949 15987982 chr2R 15988028 15988051 12 78 3.5 1.5 2.5 3.4 102 chr2R 15987949 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988000 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988051 intron,5` UTR Strn-Mlck -,CR45021 + chr2R_12_15985001 chr2R_15985001 RAL-757 845 chr2R 16218605 16218641 chr2R 16218682 16218719 5 77 0.5 2.0 1.2 2.3 114 chr2R 16218605 intron mrj - chr2R 16218662 intron mrj - chr2R 16218719 intron mrj - chr2R_5_16215001 chr2R_16215001 RAL-757 846 chr2R 16245423 16245431 chr2R 16245507 16245525 7 93 4.0 3.0 3.5 1.6 102 chr2R 16245423 intron CngA - chr2R 16245474 intron CngA - chr2R 16245525 intron CngA - chr2R_7_16245001 chr2R_16245001 RAL-757 847 chr2R 16380781 16380806 chr2R 16380849 16380884 15 69 1.0 4.0 2.5 4.3 103 chr2R 16380781 intron CG43187 + chr2R 16380832 intron CG43187 + chr2R 16380884 exon CG43187 + chr2R_15_16380001 chr2R_16380001 RAL-757 848 chr2R 16387525 16387542 chr2R 16387994 16388005 5 474 1.5 3.0 2.2 1.6 480 chr2R 16387525 intron Sema-2b + chr2R 16387765 intron Sema-2b + chr2R 16388005 intron Sema-2b + chr2R_5_16385001 chr2R_16385001 RAL-757 849 chr2R 16486868 16486886 chr2R 16486962 16486975 8 93 6.5 10.0 8.2 0.9 107 chr2R 16486868 exon CG33458 + chr2R 16486922 intron CG33458 + chr2R 16486975 intron CG33458 + chr2R_8_16485001 chr2R_16485001 RAL-757 850 chr2R 16518045 16518067 chr2R 16518121 16518143 11 73 8.5 3.5 6.0 1.6 98 chr2R 16518045 intron Sema-2a + chr2R 16518094 intron Sema-2a + chr2R 16518143 intron Sema-2a + chr2R_11_16515001 chr2R_16515001 RAL-757 851 chr2R 16547014 16547020 chr2R 16547079 16547100 9 72 2.5 0.5 1.5 3.6 86 chr2R 16547014 intergenic not near genes chr2R 16547057 intergenic not near genes chr2R 16547100 intergenic not near genes chr2R_9_16545001 chr2R_16545001 RAL-757 852 chr2R 16571872 16571906 chr2R 16571967 16571986 21 93 5.0 10.0 7.5 2.5 114 chr2R 16571872 intergenic CG4927 + chr2R 16571929 intergenic CG4927 + chr2R 16571986 intergenic CG4927 + chr2R_21_16570001 chr2R_16570001 RAL-757 853 chr2R 16601528 16601548 chr2R 16601634 16601647 14 107 8.0 2.5 5.2 2.3 119 chr2R 16601528 intron CG8303 - chr2R 16601588 intron CG8303 - chr2R 16601647 intron CG8303 - chr2R_14_16600001 chr2R_16600001 RAL-757 854 chr2R 16617062 16617087 chr2R 16617140 16617166 18 78 4.0 3.5 3.8 3.8 104 chr2R 16617062 intron CG5065 + chr2R 16617114 intron CG5065 + chr2R 16617166 intron CG5065 + chr2R_18_16615001 chr2R_16615001 RAL-757 855 chr2R 16618723 16618737 chr2R 16618787 16618813 4 73 1.5 6.0 3.8 0.8 90 chr2R 16618723 intron CG5065 + chr2R 16618768 intron CG5065 + chr2R 16618813 5` UTR CG5065 + chr2R_4_16615001 chr2R_16615001 RAL-757 856 chr2R 16665136 16665151 chr2R 16665220 16665235 6 84 3.5 10.5 7.0 0.8 99 chr2R 16665136 intron Picot - chr2R 16665186 intron Picot - chr2R 16665235 intron Picot - chr2R_6_16665001 chr2R_16665001 RAL-757 857 chr2R 16708994 16709014 chr2R 16709089 16709110 11 93 7.0 6.5 6.8 1.4 116 chr2R 16708994 intron CG30463 - chr2R 16709052 intron CG30463 - chr2R 16709110 intron CG30463 - chr2R_11_16705001 chr2R_16705001 RAL-757 858 chr2R 16709016 16709023 chr2R 16709086 16709118 5 84 6.0 6.0 6.0 0.7 102 chr2R 16709016 intron CG30463 - chr2R 16709067 intron CG30463 - chr2R 16709118 intron CG30463 - chr2R_5_16705001 chr2R_16705001 RAL-757 859 chr2R 16775658 16775672 chr2R 16775925 16775939 4 267 5.5 9.5 7.5 0.5 281 chr2R 16775658 3` UTR Arp53D + chr2R 16775798 intergenic Arp53D + chr2R 16775939 intergenic Arp53D + chr2R_4_16775001 chr2R_16775001 RAL-757 860 chr2R 16893775 16893805 chr2R 16893858 16893883 9 81 5.5 5.0 5.2 1.5 108 chr2R 16893775 intron CG8910 - chr2R 16893829 intron CG8910 - chr2R 16893883 intron CG8910 - chr2R_9_16890001 chr2R_16890001 RAL-757 861 chr2R 16918107 16918123 chr2R 16918575 16918590 6 468 8.0 1.0 4.5 1.1 483 chr2R 16918107 intergenic not near genes chr2R 16918348 intergenic not near genes chr2R 16918590 intergenic not near genes chr2R_6_16915001 chr2R_16915001 RAL-757 862 chr2R 16975204 16975221 chr2R 16975281 16975292 9 76 6.0 4.5 5.2 1.5 88 chr2R 16975204 intron Cbp53E + chr2R 16975248 intron Cbp53E + chr2R 16975292 intron Cbp53E + chr2R_9_16975001 chr2R_16975001 RAL-757 863 chr2R 16981960 16982084 chr2R 16982073 16982162 9 96 0.0 0.0 0.0 9.0 202 chr2R 16981960 intron Cbp53E + chr2R 16982061 intron Cbp53E + chr2R 16982162 intron Cbp53E + chr2R_9_16980001 chr2R_16980001 RAL-757 864 chr2R 17079052 17079089 chr2R 17079134 17079164 13 78 4.0 7.5 5.8 1.9 112 chr2R 17079052 intron CG30460 - chr2R 17079108 intron CG30460 - chr2R 17079164 intron CG30460 - chr2R_13_17075001 chr2R_17075001 RAL-757 865 chr2R 17090735 17090742 chr2R 17090824 17090831 5 89 8.5 7.5 8.0 0.6 96 chr2R 17090735 intron Sply - chr2R 17090783 intron Sply - chr2R 17090831 intron Sply - chr2R_5_17090001 chr2R_17090001 RAL-757 866 chr2R 17147243 17147276 chr2R 17152274 17152282 jockey 11 5028 3.5 8.0 5.8 1.6 5039 chr2R 17147243 intergenic not near genes chr2R 17149762 intergenic not near genes chr2R 17152282 intergenic not near genes chr2R_11_17145001 chr2R_17145001 RAL-757 867 chr2R 17176353 17176389 chr2R 17182543 17182577 diver 14 6188 3.5 7.5 5.5 2.2 6224 chr2R 17176353 intergenic not near genes chr2R 17179465 intergenic not near genes chr2R 17182577 intergenic not near genes chr2R_14_17175001 chr2R_17175001 RAL-757 868 chr2R 17194249 17194254 chr2R 17195052 17195058 5 803 10.5 7.0 8.8 0.5 809 chr2R 17194249 intergenic not near genes chr2R 17194654 intergenic not near genes chr2R 17195058 intergenic CG10950 + chr2R_5_17190001 chr2R_17190001 RAL-757 869 chr2R 17194260 17194276 chr2R 17195049 17195075 8 798 3.5 7.0 5.2 1.3 815 chr2R 17194260 intergenic not near genes chr2R 17194668 intergenic not near genes chr2R 17195075 intergenic CG10950 + chr2R_8_17190001 chr2R_17190001 RAL-757 870 chr2R 17236511 17236542 chr2R 17241715 17241737 copia 9 5201 3.5 9.5 6.5 1.2 5226 chr2R 17236511 intron mbl + chr2R 17239124 intron mbl + chr2R 17241737 intron mbl + chr2R_9_17235001 chr2R_17235001 RAL-757 871 chr2R 17339599 17339601 chr2R 17339691 17339693 4 92 0.0 7.0 3.5 0.9 94 chr2R 17339599 intron mbl + chr2R 17339646 intron mbl + chr2R 17339693 intron mbl + chr2R_4_17335001 chr2R_17335001 RAL-757 872 chr2R 17345470 17345503 chr2R 17345552 17345586 16 79 7.0 2.0 4.5 2.9 116 chr2R 17345470 intron mbl + chr2R 17345528 intron mbl + chr2R 17345586 intron mbl + chr2R_16_17345001 chr2R_17345001 RAL-757 873 chr2R 17459006 17459038 chr2R 17459091 17459123 21 83 6.0 7.5 6.8 2.7 117 chr2R 17459006 intron CG14478 + chr2R 17459064 intron CG14478 + chr2R 17459123 intron CG14478 + chr2R_21_17455001 chr2R_17455001 RAL-757 874 chr2R 17485914 17485947 chr2R 17490675 17490683 F-element 10 4757 7.5 1.0 4.2 1.9 4769 chr2R 17485914 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488298 intron NT5E-2 + chr2R 17490683 intron NT5E-2 + chr2R_10_17485001 chr2R_17485001 RAL-757 875 chr2R 17500680 17500694 chr2R 17500746 17500765 13 71 0.5 13.0 6.8 1.7 85 chr2R 17500680 intergenic not near genes chr2R 17500722 intergenic not near genes chr2R 17500765 intergenic not near genes chr2R_13_17500001 chr2R_17500001 RAL-757 876 chr2R 17640128 17640136 chr2R 17640344 17640365 5 223 2.0 3.5 2.8 1.3 237 chr2R 17640128 intergenic not near genes chr2R 17640246 intergenic not near genes chr2R 17640365 intergenic not near genes chr2R_5_17640001 chr2R_17640001 RAL-757 877 chr2R 17709984 17710013 chr2R 17710075 17710102 8 86 2.5 2.5 2.5 2.3 118 chr2R 17709984 intron CG6424 - chr2R 17710043 intron CG6424 - chr2R 17710102 intron CG6424 - chr2R_8_17710001 chr2R_17710001 RAL-757 878 chr2R 17782365 17782393 chr2R 17783568 17783596 pogo 10 1201 3.0 2.5 2.8 2.6 1231 chr2R 17782365 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783596 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-757 879 chr2R 17784027 17784054 chr2R 17784267 17784272 pogo 8 236 0.5 3.0 1.8 2.9 245 chr2R 17784027 intergenic mir-31a - chr2R 17784150 intergenic mir-31a - chr2R 17784272 intergenic mir-31a - chr2R_8_17780001 chr2R_17780001 RAL-757 880 chr2R 17852924 17852957 chr2R 17853013 17853043 14 88 8.0 6.5 7.2 1.7 119 chr2R 17852924 intron olf186-F + chr2R 17852984 intron olf186-F + chr2R 17853043 intron olf186-F + chr2R_14_17850001 chr2R_17850001 RAL-757 881 chr2R 17860173 17860205 chr2R 17860255 17860287 21 79 2.0 4.5 3.2 5.0 114 chr2R 17860173 3` UTR olf186-F + chr2R 17860230 3` UTR olf186-F + chr2R 17860287 3` UTR olf186-F + chr2R_21_17860001 chr2R_17860001 RAL-757 882 chr2R 17869702 17869736 chr2R 17869797 17869831 9 94 5.0 5.0 5.0 1.5 129 chr2R 17869702 intron,5` UTR Mapmodulin -,CR44417 + chr2R 17869766 intron,5` UTR Mapmodulin -,CR44417 + chr2R 17869831 intron,5` UTR Mapmodulin -,CR44417 + chr2R_9_17865001 chr2R_17865001 RAL-757 883 chr2R 17918163 17918189 chr2R 17918240 17918248 9 72 4.5 8.0 6.2 1.2 85 chr2R 17918163 intron Elk + chr2R 17918206 intron Elk + chr2R 17918248 intron Elk + chr2R_9_17915001 chr2R_17915001 RAL-757 884 chr2R 17937527 17937552 chr2R 17937599 17937631 9 76 4.0 6.5 5.2 1.5 104 chr2R 17937527 intergenic not near genes chr2R 17937579 intergenic not near genes chr2R 17937631 intergenic not near genes chr2R_9_17935001 chr2R_17935001 RAL-757 885 chr2R 17982924 17982952 chr2R 17983009 17983012 17 82 4.5 4.5 4.5 3.1 88 chr2R 17982924 intron dpr13 - chr2R 17982968 intron dpr13 - chr2R 17983012 intron dpr13 - chr2R_17_17980001 chr2R_17980001 RAL-757 886 chr2R 17990773 17990800 chr2R 17990921 17990949 12 146 3.0 4.5 3.8 2.5 176 chr2R 17990773 intron dpr13 - chr2R 17990861 intron dpr13 - chr2R 17990949 intron dpr13 - chr2R_12_17990001 chr2R_17990001 RAL-757 887 chr2R 18045671 18045704 chr2R 18046023 18046056 jockey 10 352 4.5 5.5 5.0 1.7 385 chr2R 18045671 intergenic not near genes chr2R 18045864 intergenic not near genes chr2R 18046056 intergenic CG5767 - chr2R_10_18045001 chr2R_18045001 RAL-757 888 chr2R 18076033 18076062 chr2R 18076136 18076151 6 96 4.0 3.5 3.8 1.2 118 chr2R 18076033 intron CG34386 + chr2R 18076092 intron CG34386 + chr2R 18076151 intron CG34386 + chr2R_6_18075001 chr2R_18075001 RAL-757 889 chr2R 18111686 18111716 chr2R 18115554 18115584 F-element 17 3865 5.0 8.5 6.8 2.2 3898 chr2R 18111686 intergenic not near genes chr2R 18113635 intergenic not near genes chr2R 18115584 intergenic not near genes chr2R_17_18110001 chr2R_18110001 RAL-757 890 chr2R 18289445 18289448 chr2R 18289541 18289550 4 100 4.5 5.0 4.8 0.7 105 chr2R 18289445 intron,intron sbb -,CG14502 + chr2R 18289498 intron,intron sbb -,CG14502 + chr2R 18289550 exon,intron sbb -,CG14502 + chr2R_4_18285001 chr2R_18285001 RAL-757 891 chr2R 18289450 18289454 chr2R 18289537 18289555 5 96 4.0 4.0 4.0 1.0 105 chr2R 18289450 intron,intron sbb -,CG14502 + chr2R 18289502 intron,intron sbb -,CG14502 + chr2R 18289555 exon,intron sbb -,CG14502 + chr2R_5_18285001 chr2R_18285001 RAL-757 892 chr2R 18358387 18358421 chr2R 18372599 18372626 roo 23 14209 4.0 8.5 6.2 3.2 14239 chr2R 18358387 intergenic not near genes chr2R 18365506 intergenic not near genes chr2R 18372626 intergenic not near genes chr2R_23_18365001 chr2R_18365001 RAL-757 893 chr2R 18398158 18398186 chr2R 18398253 18398279 12 94 6.0 1.5 3.8 2.5 121 chr2R 18398158 intron GstE10 - chr2R 18398218 intron GstE10 - chr2R 18398279 intron GstE10 - chr2R_12_18395001 chr2R_18395001 RAL-757 894 chr2R 18405757 18405788 chr2R 18405830 18405868 7 75 3.0 0.0 1.5 2.8 111 chr2R 18405757 intergenic GstE6 +,GstE5 + chr2R 18405812 intergenic GstE6 +,GstE5 + chr2R 18405868 intergenic GstE6 + chr2R_7_18405001 chr2R_18405001 RAL-757 895 chr2R 18471916 18471923 chr2R 18471992 18471995 4 75 2.5 2.5 2.5 1.1 79 chr2R 18471916 intron CG30116 - chr2R 18471956 intron CG30116 - chr2R 18471995 intron CG30116 - chr2R_4_18470001 chr2R_18470001 RAL-757 896 chr2R 18486844 18486880 chr2R 18487106 18487112 20 255 3.5 5.0 4.2 3.8 268 chr2R 18486844 intron CG30116 - chr2R 18486978 intron CG30116 - chr2R 18487112 intron CG30116 - chr2R_20_18485001 chr2R_18485001 RAL-757 897 chr2R 18575815 18575831 chr2R 18581984 18582019 3S18 7 6172 1.5 8.0 4.8 1.2 6204 chr2R 18575815 intron GEFmeso - chr2R 18578917 intron GEFmeso - chr2R 18582019 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-757 898 chr2R 18590865 18590895 chr2R 18600017 18600046 roo 7 9151 3.0 4.0 3.5 1.6 9181 chr2R 18590865 intron GEFmeso - chr2R 18595456 intron GEFmeso - chr2R 18600046 intron GEFmeso - chr2R_7_18595001 chr2R_18595001 RAL-757 899 chr2R 18605131 18605162 chr2R 18605223 18605251 13 91 3.5 7.5 5.5 2.0 120 chr2R 18605131 intron GEFmeso - chr2R 18605191 intron GEFmeso - chr2R 18605251 intron GEFmeso - chr2R_13_18605001 chr2R_18605001 RAL-757 900 chr2R 18692903 18692921 chr2R 18692990 18693008 8 85 2.5 5.0 3.8 1.7 105 chr2R 18692903 intron Sik3 + chr2R 18692956 intron Sik3 + chr2R 18693008 intron Sik3 + chr2R_8_18690001 chr2R_18690001 RAL-757 901 chr2R 18713241 18713270 chr2R 18713318 18713347 14 75 6.5 4.0 5.2 2.3 106 chr2R 18713241 intergenic not near genes chr2R 18713294 intergenic not near genes chr2R 18713347 intergenic not near genes chr2R_14_18710001 chr2R_18710001 RAL-757 902 chr2R 18738206 18738240 chr2R 18738282 18738311 16 73 6.0 3.5 4.8 2.8 105 chr2R 18738206 intron Hs3st-A + chr2R 18738258 intron Hs3st-A + chr2R 18738311 intron Hs3st-A + chr2R_16_18735001 chr2R_18735001 RAL-757 903 chr2R 18785934 18785941 chr2R 18786013 18786020 4 79 3.5 8.0 5.8 0.6 86 chr2R 18785934 intron CG15080 + chr2R 18785977 intron CG15080 + chr2R 18786020 intron CG15080 + chr2R_4_18785001 chr2R_18785001 RAL-757 904 chr2R 18785942 18785949 chr2R 18786002 18786027 6 67 1.5 5.5 3.5 1.3 85 chr2R 18785942 intron CG15080 + chr2R 18785984 intron CG15080 + chr2R 18786027 intron CG15080 + chr2R_6_18785001 chr2R_18785001 RAL-757 905 chr2R 18835905 18835908 chr2R 18835982 18835990 6 81 8.0 0.5 4.2 1.2 85 chr2R 18835905 intron CG15083 + chr2R 18835948 intron CG15083 + chr2R 18835990 intron CG15083 + chr2R_6_18835001 chr2R_18835001 RAL-757 906 chr2R 18863317 18863344 chr2R 18863399 18863426 7 82 8.0 3.5 5.8 1.0 109 chr2R 18863317 intergenic CG43069 + chr2R 18863372 intergenic CG43069 + chr2R 18863426 intergenic CG43069 +,CG43070 + chr2R_7_18860001 chr2R_18860001 RAL-757 907 chr2R 18953160 18953174 chr2R 18953247 18953261 5 87 6.0 3.5 4.8 0.9 101 chr2R 18953160 intron sano + chr2R 18953210 intron sano + chr2R 18953261 intron sano + chr2R_5_18950001 chr2R_18950001 RAL-757 908 chr2R 18953175 18953187 chr2R 18953246 18953274 8 80 2.5 3.5 3.0 2.0 99 chr2R 18953175 intron sano + chr2R 18953224 intron sano + chr2R 18953274 intron sano + chr2R_8_18950001 chr2R_18950001 RAL-757 909 chr2R 18964920 18964953 chr2R 18964996 18965029 16 75 3.5 5.5 4.5 2.9 109 chr2R 18964920 intergenic not near genes chr2R 18964974 intergenic not near genes chr2R 18965029 intergenic not near genes chr2R_16_18960001 chr2R_18960001 RAL-757 910 chr2R 18992030 18992047 chr2R 18992161 18992188 9 136 4.5 4.5 4.5 1.6 158 chr2R 18992030 intron tn + chr2R 18992109 intron tn + chr2R 18992188 intron tn + chr2R_9_18990001 chr2R_18990001 RAL-757 911 chr2R 19025308 19025326 chr2R 19025542 19025550 6 232 2.5 2.5 2.5 1.7 242 chr2R 19025308 intron 5-HT1B - chr2R 19025429 intron 5-HT1B - chr2R 19025550 intron 5-HT1B - chr2R_6_19025001 chr2R_19025001 RAL-757 912 chr2R 19026052 19026061 chr2R 19026153 19026162 5 101 12.5 0.0 6.2 0.7 110 chr2R 19026052 intron 5-HT1B - chr2R 19026107 intron 5-HT1B - chr2R 19026162 intron 5-HT1B - chr2R_5_19025001 chr2R_19025001 RAL-757 913 chr2R 19363193 19363204 chr2R 19363269 19363274 6 75 0.5 0.0 0.2 5.0 81 chr2R 19363193 intergenic CG10051 + chr2R 19363234 intergenic CG10051 + chr2R 19363274 intergenic CG10051 + chr2R_6_19360001 chr2R_19360001 RAL-757 914 chr2R 19420005 19420035 chr2R 19420080 19420101 21 74 2.5 5.5 4.0 4.2 96 chr2R 19420005 intron hts - chr2R 19420053 intron hts - chr2R 19420101 intron hts - chr2R_21_19420001 chr2R_19420001 RAL-757 915 chr2R 19498497 19498504 chr2R 19498573 19498581 7 77 0.0 9.0 4.5 1.3 84 chr2R 19498497 intron CG15120 + chr2R 19498539 intron CG15120 + chr2R 19498581 intron CG15120 + chr2R_7_19495001 chr2R_19495001 RAL-757 916 chr2R 19604007 19604007 chr2R 19604060 19604070 4 59 3.0 6.5 4.8 0.7 63 chr2R 19604007 intron sm - chr2R 19604038 intron sm - chr2R 19604070 intron sm - chr2R_4_19600001 chr2R_19600001 RAL-757 917 chr2R 19641782 19641804 chr2R 19641887 19641909 4 105 5.5 5.5 5.5 0.6 127 chr2R 19641782 intergenic not near genes chr2R 19641846 intergenic not near genes chr2R 19641909 intergenic not near genes chr2R_4_19640001 chr2R_19640001 RAL-757 918 chr2R 19776593 19776628 chr2R 19779916 19779951 jockey 13 3319 7.0 5.0 6.0 1.9 3358 chr2R 19776593 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779951 intergenic not near genes chr2R_13_19775001 chr2R_19775001 RAL-757 919 chr2R 19807674 19807702 chr2R 19807754 19807783 9 79 3.0 5.0 4.0 1.8 109 chr2R 19807674 intergenic not near genes chr2R 19807728 intergenic not near genes chr2R 19807783 intergenic not near genes chr2R_9_19805001 chr2R_19805001 RAL-757 920 chr2R 19821175 19821209 chr2R 19821266 19821285 8 85 2.5 5.0 3.8 1.7 110 chr2R 19821175 intergenic not near genes chr2R 19821230 intergenic not near genes chr2R 19821285 intergenic not near genes chr2R_8_19820001 chr2R_19820001 RAL-757 921 chr2R 19914844 19914872 chr2R 19922256 19922284 mdg1 14 7409 7.0 3.5 5.2 2.3 7440 chr2R 19914844 intergenic not near genes chr2R 19918564 intergenic not near genes chr2R 19922284 intergenic not near genes chr2R_14_19915001 chr2R_19915001 RAL-757 922 chr2R 19943271 19943291 chr2R 19943380 19943401 7 109 3.5 5.0 4.2 1.3 130 chr2R 19943271 intergenic not near genes chr2R 19943336 intergenic not near genes chr2R 19943401 intergenic not near genes chr2R_7_19940001 chr2R_19940001 RAL-757 923 chr2R 20080600 20080623 chr2R 20080677 20080700 10 76 0.0 10.0 5.0 1.7 100 chr2R 20080600 intergenic not near genes chr2R 20080650 intergenic not near genes chr2R 20080700 intergenic not near genes chr2R_10_20080001 chr2R_20080001 RAL-757 924 chr2R 20118880 20118898 chr2R 20118966 20118986 5 88 2.5 5.0 3.8 1.0 106 chr2R 20118880 intergenic not near genes chr2R 20118933 intergenic not near genes chr2R 20118986 intergenic not near genes chr2R_5_20115001 chr2R_20115001 RAL-757 925 chr2R 20125734 20125746 chr2R 20125810 20125821 6 76 0.5 13.0 6.8 0.8 87 chr2R 20125734 intergenic not near genes chr2R 20125778 intergenic not near genes chr2R 20125821 intergenic not near genes chr2R_6_20125001 chr2R_20125001 RAL-757 926 chr2R 20226163 20226176 chr2R 20226252 20226260 4 88 7.5 0.5 4.0 0.8 97 chr2R 20226163 intergenic not near genes chr2R 20226212 intergenic not near genes chr2R 20226260 intergenic not near genes chr2R_4_20225001 chr2R_20225001 RAL-757 927 chr2R 20405934 20405964 chr2R 20406037 20406044 6 98 5.5 1.5 3.5 1.3 110 chr2R 20405934 intergenic not near genes chr2R 20405989 intergenic not near genes chr2R 20406044 intergenic not near genes chr2R_6_20405001 chr2R_20405001 RAL-757 928 chr2R 20483913 20483946 chr2R 20484286 20484309 16 367 1.5 7.5 4.5 2.9 396 chr2R 20483913 intergenic not near genes chr2R 20484111 intergenic not near genes chr2R 20484309 intergenic not near genes chr2R_16_20480001 chr2R_20480001 RAL-757 929 chr2R 20506223 20506241 chr2R 20506315 20506328 6 95 1.5 1.5 1.5 2.4 105 chr2R 20506223 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506276 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506328 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_6_20505001 chr2R_20505001 RAL-757 930 chr2R 20508628 20508660 chr2R 20508765 20508797 8 137 2.0 6.0 4.0 1.6 169 chr2R 20508628 5` UTR CR44646 + chr2R 20508712 5` UTR CR44646 + chr2R 20508797 intergenic CR44646 + chr2R_8_20505001 chr2R_20505001 RAL-757 931 chr2R 20572573 20572585 chr2R 20572663 20572675 8 88 5.5 6.5 6.0 1.1 102 chr2R 20572573 intron qsm - chr2R 20572624 intron qsm - chr2R 20572675 intron qsm - chr2R_8_20570001 chr2R_20570001 RAL-757 932 chr2R 20601720 20601755 chr2R 20601805 20601840 20 84 1.0 4.0 2.5 5.7 120 chr2R 20601720 intron bl + chr2R 20601780 intron bl + chr2R 20601840 intron bl + chr2R_20_20600001 chr2R_20600001 RAL-757 933 chr2R 20651598 20651624 chr2R 20651682 20651707 7 83 5.0 6.5 5.8 1.0 109 chr2R 20651598 intron Lrt + chr2R 20651652 intron Lrt + chr2R 20651707 intron Lrt + chr2R_7_20650001 chr2R_20650001 RAL-757 934 chr2R 20702543 20702576 chr2R 20702852 20702870 9 304 3.5 0.0 1.8 3.2 327 chr2R 20702543 intron dpr + chr2R 20702706 intron dpr + chr2R 20702870 intron dpr + chr2R_9_20700001 chr2R_20700001 RAL-757 935 chr2R 20739443 20739478 chr2R 20744211 20744238 F-element 7 4764 3.0 2.5 2.8 1.8 4795 chr2R 20739443 intron dpr + chr2R 20741840 intron dpr + chr2R 20744238 intron dpr + chr2R_7_20740001 chr2R_20740001 RAL-757 936 chr2R 20783316 20783333 chr2R 20788084 20788105 F-element 7 4768 5.5 9.0 7.2 0.9 4789 chr2R 20783316 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788105 intergenic CG43666 - chr2R_7_20785001 chr2R_20785001 RAL-757 937 chr2R 20800518 20800538 chr2R 20800643 20800665 4 124 6.0 2.0 4.0 0.8 147 chr2R 20800518 intergenic not near genes chr2R 20800592 intergenic not near genes chr2R 20800665 intergenic not near genes chr2R_4_20800001 chr2R_20800001 RAL-757 938 chr2R 20814534 20814560 chr2R 20814640 20814650 13 101 4.0 6.5 5.2 2.1 116 chr2R 20814534 intergenic not near genes chr2R 20814592 intergenic not near genes chr2R 20814650 intergenic not near genes chr2R_13_20810001 chr2R_20810001 RAL-757 939 chr2R 20833034 20833060 chr2R 20833117 20833131 10 79 2.0 7.0 4.5 1.8 97 chr2R 20833034 intron,intron insc -,sktl - chr2R 20833082 intron,intron insc -,sktl - chr2R 20833131 intron,intron insc -,sktl - chr2R_10_20830001 chr2R_20830001 RAL-757 940 chr2R 7488818 7488818 chr2R 20889272 20889276 4 13400456 24.0 19.5 21.8 0.2 13400458 chr2R 7488818 intron wech - chr2R 14189047 exon CG30069 + chr2R 20889276 intron otp - chr2R_4_14185001 chr2R_14185001 RAL-757 941 chr2R 20962905 20962939 chr2R 20963003 20963035 9 92 3.0 9.5 6.2 1.2 130 chr2R 20962905 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963035 intergenic not near genes chr2R_9_20960001 chr2R_20960001 RAL-757 942 chr2R 20967025 20967049 chr2R 20967102 20967103 6 73 6.0 0.0 3.0 1.5 78 chr2R 20967025 intergenic not near genes chr2R 20967064 intergenic not near genes chr2R 20967103 intergenic not near genes chr2R_6_20965001 chr2R_20965001 RAL-757 943 chr2R 20980097 20980127 chr2R 20980192 20980226 15 96 5.5 5.5 5.5 2.3 129 chr2R 20980097 intron CG9313 + chr2R 20980162 intron CG9313 + chr2R 20980226 intron CG9313 + chr2R_15_20980001 chr2R_20980001 RAL-757 944 chr2R 21136904 21136918 chr2R 21136988 21137001 7 83 2.5 9.0 5.8 1.0 97 chr2R 21136904 intron Magi - chr2R 21136952 intron Magi - chr2R 21137001 intron Magi - chr2R_7_21135001 chr2R_21135001 RAL-757 945 chr2R 21141117 21141149 chr2R 21141213 21141245 13 93 3.5 6.5 5.0 2.2 128 chr2R 21141117 intron Magi - chr2R 21141181 intron Magi - chr2R 21141245 intron Magi - chr2R_13_21140001 chr2R_21140001 RAL-757 946 chr2R 21151124 21151146 chr2R 21153751 21153765 opus 7 2630 9.0 8.5 8.8 0.7 2641 chr2R 21151124 intron CG30389 - chr2R 21152444 intron CG30389 - chr2R 21153765 intron CG30389 - chr2R_7_21150001 chr2R_21150001 RAL-757 947 chr2R 21363136 21363178 chr2R 21363234 21363242 6 75 0.0 0.0 0.0 6.0 106 chr2R 21363136 intron cv-2 - chr2R 21363189 intron cv-2 - chr2R 21363242 intron cv-2 - chr2R_6_21360001 chr2R_21360001 RAL-757 948 chr2R 21364698 21364703 chr2R 21364829 21364851 4 142 8.5 0.0 4.2 0.8 153 chr2R 21364698 intron cv-2 - chr2R 21364774 intron cv-2 - chr2R 21364851 intron cv-2 - chr2R_4_21360001 chr2R_21360001 RAL-757 949 chr2R 21370520 21370539 chr2R 21370627 21370646 11 106 8.5 8.5 8.5 1.2 126 chr2R 21370520 intron cv-2 - chr2R 21370583 intron cv-2 - chr2R 21370646 intron cv-2 - chr2R_11_21370001 chr2R_21370001 RAL-757 950 chr2R 21414192 21414208 chr2R 21414340 21414366 8 155 0.0 3.5 1.8 2.9 174 chr2R 21414192 intron Sdc - chr2R 21414279 intron Sdc - chr2R 21414366 intron Sdc - chr2R_8_21410001 chr2R_21410001 RAL-757 951 chr2R 21476799 21476823 chr2R 21476976 21476988 9 177 7.5 5.0 6.2 1.2 189 chr2R 21476799 intron Sdc - chr2R 21476894 intron Sdc - chr2R 21476988 intron Sdc - chr2R_9_21475001 chr2R_21475001 RAL-757 952 chr2R 21571126 21571155 chr2R 21571202 21571213 10 70 4.0 12.0 8.0 1.1 87 chr2R 21571126 intron CG10440 - chr2R 21571170 intron CG10440 - chr2R 21571213 intron CG10440 - chr2R_10_21570001 chr2R_21570001 RAL-757 953 chr2R 21700166 21700186 chr2R 21700240 21700249 11 79 2.5 2.5 2.5 3.1 83 chr2R 21700166 intron HmgZ - chr2R 21700208 intron HmgZ - chr2R 21700249 intron HmgZ - chr2R_11_21700001 chr2R_21700001 RAL-757 954 chr2R 21721382 21721410 chr2R 21721816 21721849 9 437 1.0 2.0 1.5 3.6 467 chr2R 21721382 intron LBR + chr2R 21721616 intron LBR + chr2R 21721849 intron LBR + chr2R_9_21720001 chr2R_21720001 RAL-757 955 chr2R 21753097 21753117 chr2R 21753567 21753601 roo 14 480 5.0 5.0 5.0 2.3 504 chr2R 21753097 intergenic not near genes chr2R 21753349 intergenic not near genes chr2R 21753601 intergenic not near genes chr2R_14_21750001 chr2R_21750001 RAL-757 956 chr2R 21758344 21758362 chr2R 21758646 21758659 9 304 7.0 5.5 6.2 1.2 315 chr2R 21758344 intergenic Grx-1 + chr2R 21758502 intergenic not near genes chr2R 21758659 intergenic not near genes chr2R_9_21755001 chr2R_21755001 RAL-757 957 chr2R 21785256 21785263 chr2R 21785633 21785640 4 376 4.0 5.5 4.8 0.7 384 chr2R 21785256 intergenic not near genes chr2R 21785448 intergenic not near genes chr2R 21785640 intergenic not near genes chr2R_4_21785001 chr2R_21785001 RAL-757 958 chr2R 21785270 21785283 chr2R 21785632 21785636 4 367 2.0 5.0 3.5 0.9 366 chr2R 21785270 intergenic not near genes chr2R 21785453 intergenic not near genes chr2R 21785636 intergenic not near genes chr2R_4_21785001 chr2R_21785001 RAL-757 959 chr2R 21857360 21857363 chr2R 21857445 21857454 4 90 7.5 4.0 5.8 0.6 94 chr2R 21857360 intergenic not near genes chr2R 21857407 intergenic not near genes chr2R 21857454 intergenic not near genes chr2R_4_21855001 chr2R_21855001 RAL-757 960 chr2R 21863510 21863517 chr2R 21863601 21863605 4 91 0.5 7.5 4.0 0.8 95 chr2R 21863510 intergenic not near genes chr2R 21863558 intergenic not near genes chr2R 21863605 intergenic not near genes chr2R_4_21860001 chr2R_21860001 RAL-757 961 chr2R 21886130 21886162 chr2R 21886208 21886239 9 75 6.5 0.5 3.5 2.0 109 chr2R 21886130 intron Fili + chr2R 21886184 intron Fili + chr2R 21886239 intron Fili + chr2R_9_21885001 chr2R_21885001 RAL-757 962 chr2R 21905229 21905265 chr2R 21905374 21905410 20 143 4.0 3.5 3.8 4.2 181 chr2R 21905229 intron Fili + chr2R 21905320 intron Fili + chr2R 21905410 intron Fili + chr2R_20_21905001 chr2R_21905001 RAL-757 963 chr2R 22029490 22029504 chr2R 22029624 22029641 5 137 3.0 4.0 3.5 1.1 151 chr2R 22029490 intron CG34370 - chr2R 22029566 intron CG34370 - chr2R 22029641 intron CG34370 - chr2R_5_22025001 chr2R_22025001 RAL-757 964 chr2R 22072682 22072716 chr2R 22072767 22072783 24 81 3.5 3.5 3.5 5.3 101 chr2R 22072682 intron CG11474 - chr2R 22072732 intron CG11474 - chr2R 22072783 intron CG11474 - chr2R_24_22070001 chr2R_22070001 RAL-757 965 chr2R 22095964 22095987 chr2R 22096047 22096069 9 82 3.5 6.0 4.8 1.6 105 chr2R 22095964 intron CG11073 - chr2R 22096016 intron CG11073 - chr2R 22096069 intron CG11073 - chr2R_9_22095001 chr2R_22095001 RAL-757 966 chr2R 22102115 22102159 chr2R 22102203 22102207 8 83 0.0 2.0 1.0 4.0 92 chr2R 22102115 intergenic not near genes chr2R 22102161 intergenic not near genes chr2R 22102207 intergenic not near genes chr2R_8_22100001 chr2R_22100001 RAL-757 967 chr2R 22148063 22148095 chr2R 22148161 22148192 17 97 3.5 5.0 4.2 3.3 129 chr2R 22148063 intron a + chr2R 22148128 intron a + chr2R 22148192 intron a + chr2R_17_22145001 chr2R_22145001 RAL-757 968 chr2R 22173234 22173248 chr2R 22173310 22173337 6 87 4.5 8.0 6.2 0.8 103 chr2R 22173234 exon CG3045 - chr2R 22173286 exon CG3045 - chr2R 22173337 exon CG3045 - chr2R_6_22170001 chr2R_22170001 RAL-757 969 chr2R 22185673 22185709 chr2R 22185772 22185807 12 97 1.0 0.5 0.8 6.7 134 chr2R 22185673 3` UTR MED16 + chr2R 22185740 3` UTR MED16 + chr2R 22185807 3` UTR MED16 + chr2R_12_22185001 chr2R_22185001 RAL-757 970 chr2R 22290081 22290104 chr2R 22290165 22290184 5 83 3.0 4.5 3.8 1.0 103 chr2R 22290081 intergenic not near genes chr2R 22290132 intergenic not near genes chr2R 22290184 intergenic not near genes chr2R_5_22290001 chr2R_22290001 RAL-757 971 chr2R 22297720 22297738 chr2R 22297780 22297811 7 67 1.5 3.5 2.5 2.0 91 chr2R 22297720 intergenic wdp - chr2R 22297766 intergenic wdp - chr2R 22297811 intergenic wdp - chr2R_7_22295001 chr2R_22295001 RAL-757 972 chr2R 22349706 22349725 chr2R 22351479 22351509 jockey 8 1778 5.5 8.0 6.8 1.0 1803 chr2R 22349706 intron Liprin-gamma - chr2R 22350608 intron Liprin-gamma - chr2R 22351509 intron Liprin-gamma - chr2R_8_22350001 chr2R_22350001 RAL-757 973 chr2R 22360380 22360404 chr2R 22360813 22360824 jockey 12 430 6.0 4.0 5.0 2.0 444 chr2R 22360380 intron Liprin-gamma - chr2R 22360602 intron Liprin-gamma - chr2R 22360824 intron Liprin-gamma - chr2R_12_22360001 chr2R_22360001 RAL-757 974 chr2R 22362660 22362686 chr2R 22362739 22362765 9 78 3.5 7.5 5.5 1.4 105 chr2R 22362660 intron Liprin-gamma - chr2R 22362712 intron Liprin-gamma - chr2R 22362765 intron Liprin-gamma - chr2R_9_22360001 chr2R_22360001 RAL-757 975 chr2R 22380370 22380392 chr2R 22380456 22380483 8 88 4.5 0.0 2.2 2.5 113 chr2R 22380370 intron wrapper + chr2R 22380426 intron wrapper + chr2R 22380483 intron wrapper + chr2R_8_22380001 chr2R_22380001 RAL-757 976 chr2R 22411495 22411529 chr2R 22411568 22411587 14 75 7.5 5.5 6.5 1.9 92 chr2R 22411495 5` UTR qkr58E-3 - chr2R 22411541 5` UTR qkr58E-3 - chr2R 22411587 intergenic qkr58E-3 -,Mes4 + chr2R_14_22410001 chr2R_22410001 RAL-757 977 chr2R 22460380 22460384 chr2R 22460459 22460463 4 79 8.0 3.5 5.8 0.6 83 chr2R 22460380 intron CG10384 + chr2R 22460422 intron CG10384 + chr2R 22460463 intron CG10384 + chr2R_4_22460001 chr2R_22460001 RAL-757 978 chr2R 22460385 22460406 chr2R 22460458 22460469 13 72 3.0 3.5 3.2 3.1 84 chr2R 22460385 intron CG10384 + chr2R 22460427 intron CG10384 + chr2R 22460469 intron CG10384 + chr2R_13_22460001 chr2R_22460001 RAL-757 979 chr2R 22525746 22525775 chr2R 22529300 22529330 jockey 11 3552 6.0 7.5 6.8 1.4 3584 chr2R 22525746 intron px - chr2R 22527538 intron px - chr2R 22529330 intron px - chr2R_11_22525001 chr2R_22525001 RAL-757 980 chr2R 22540939 22540970 chr2R 22541017 22541049 9 75 1.5 1.5 1.5 3.6 110 chr2R 22540939 exon px - chr2R 22540994 intron px - chr2R 22541049 intron px - chr2R_9_22540001 chr2R_22540001 RAL-757 981 chr2R 22620831 22620859 chr2R 22620931 22620959 10 98 1.5 4.0 2.8 2.6 128 chr2R 22620831 5` UTR CG33143 + chr2R 22620895 5` UTR CG33143 + chr2R 22620959 5` UTR CG33143 + chr2R_10_22620001 chr2R_22620001 RAL-757 982 chr2R 22623453 22623464 chr2R 22623593 22623603 4 140 10.0 5.5 7.8 0.5 150 chr2R 22623453 intron CG33143 + chr2R 22623528 intron CG33143 + chr2R 22623603 intron CG33143 + chr2R_4_22620001 chr2R_22620001 RAL-757 983 chr2R 22623466 22623486 chr2R 22623591 22623626 8 129 5.0 5.0 5.0 1.3 160 chr2R 22623466 intron CG33143 + chr2R 22623546 intron CG33143 + chr2R 22623626 intron CG33143 + chr2R_8_22620001 chr2R_22620001 RAL-757 984 chr2R 22641706 22641719 chr2R 22641796 22641797 4 87 5.5 6.0 5.8 0.6 91 chr2R 22641706 intergenic Ugt58Fa -,RpS24 - chr2R 22641752 intergenic Ugt58Fa -,RpS24 - chr2R 22641797 3` UTR Ugt58Fa - chr2R_4_22640001 chr2R_22640001 RAL-757 985 chr2R 22774961 22775001 chr2R 22775380 22775411 jockey 20 416 6.0 7.5 6.8 2.6 450 chr2R 22774961 intron CG42260 - chr2R 22775186 intron CG42260 - chr2R 22775411 intron CG42260 - chr2R_20_22775001 chr2R_22775001 RAL-757 986 chr2R 22781954 22781989 chr2R 22782138 22782170 5 177 4.5 3.5 4.0 1.0 216 chr2R 22781954 intron CG42260 - chr2R 22782062 intron CG42260 - chr2R 22782170 intron CG42260 - chr2R_5_22780001 chr2R_22780001 RAL-757 987 chr2R 22834667 22834920 chr2R 22837415 22837685 4 2756 12.0 18.5 15.2 0.2 3018 chr2R 22834667 5` UTR CG12490 + chr2R 22836176 exon CG12490 + chr2R 22837685 intron CG9825 + chr2R_4_22835001 chr2R_22835001 RAL-757 988 chr2R 22835369 22835398 chr2R 22835444 22835472 7 66 2.5 4.5 3.5 1.6 103 chr2R 22835369 exon CG12490 + chr2R 22835420 exon CG12490 + chr2R 22835472 exon CG12490 + chr2R_7_22835001 chr2R_22835001 RAL-757 989 chr2R 22843025 22843034 chr2R 22844987 22844995 flea 4 1962 16.0 7.5 11.8 0.3 1970 chr2R 22843025 intergenic CG9826 + chr2R 22844010 intergenic not near genes chr2R 22844995 intergenic not near genes chr2R_4_22840001 chr2R_22840001 RAL-757 990 chr2R 22843035 22843053 chr2R 22844986 22845015 flea 11 1959 8.5 7.5 8.0 1.2 1980 chr2R 22843035 intergenic CG9826 + chr2R 22844025 intergenic not near genes chr2R 22845015 intergenic not near genes chr2R_11_22840001 chr2R_22840001 RAL-757 991 chr2R 23052653 23052669 chr2R 23052729 23052743 6 73 11.5 4.0 7.8 0.7 90 chr2R 23052653 intergenic not near genes chr2R 23052698 intergenic not near genes chr2R 23052743 intergenic not near genes chr2R_6_23050001 chr2R_23050001 RAL-757 992 chr2R 23052670 23052688 chr2R 23052726 23052764 9 72 5.0 3.0 4.0 1.8 94 chr2R 23052670 intergenic not near genes chr2R 23052717 intergenic not near genes chr2R 23052764 intergenic not near genes chr2R_9_23050001 chr2R_23050001 RAL-757 993 chr2R 23061772 23061789 chr2R 23061866 23061883 4 92 4.5 7.5 6.0 0.6 111 chr2R 23061772 3` UTR l(2)06496 - chr2R 23061828 3` UTR l(2)06496 - chr2R 23061883 3` UTR l(2)06496 - chr2R_4_23060001 chr2R_23060001 RAL-757 994 chr2R 23070416 23070443 chr2R 23070504 23070539 15 91 4.0 4.0 4.0 3.0 123 chr2R 23070416 intron l(2)k09913 + chr2R 23070478 intron l(2)k09913 + chr2R 23070539 intron l(2)k09913 + chr2R_15_23070001 chr2R_23070001 RAL-757 995 chr2R 23138447 23138476 chr2R 23138532 23138558 5 84 4.5 2.5 3.5 1.1 111 chr2R 23138447 intergenic CG30192 + chr2R 23138502 intergenic CG30192 + chr2R 23138558 intergenic CG30192 + chr2R_5_23135001 chr2R_23135001 RAL-757 996 chr2R 23186102 23186121 chr2R 23186242 23186266 10 143 1.0 4.5 2.8 2.6 164 chr2R 23186102 intron CG34371 - chr2R 23186184 intron CG34371 - chr2R 23186266 intron CG34371 - chr2R_10_23185001 chr2R_23185001 RAL-757 997 chr2R 23219006 23219024 chr2R 23219245 23219261 10 236 5.0 1.0 3.0 2.5 255 chr2R 23219006 intergenic not near genes chr2R 23219134 intergenic not near genes chr2R 23219261 intergenic not near genes chr2R_10_23215001 chr2R_23215001 RAL-757 998 chr2R 23222402 23222431 chr2R 23223172 23223174 14 769 2.0 1.0 1.5 5.6 772 chr2R 23222402 intergenic not near genes chr2R 23222788 intergenic not near genes chr2R 23223174 intergenic not near genes chr2R_14_23220001 chr2R_23220001 RAL-757 999 chr2R 23228296 23228323 chr2R 23228399 23228411 7 100 2.5 6.0 4.2 1.3 115 chr2R 23228296 intergenic not near genes chr2R 23228354 intergenic not near genes chr2R 23228411 intergenic not near genes chr2R_7_23225001 chr2R_23225001 RAL-757 1000 chr2R 23265915 23265934 chr2R 23266357 23266361 6 437 9.5 2.5 6.0 0.9 446 chr2R 23265915 intergenic CG12782 - chr2R 23266138 intergenic not near genes chr2R 23266361 intergenic not near genes chr2R_6_23265001 chr2R_23265001 RAL-757 1001 chr2R 23356273 23356309 chr2R 23356362 23356388 16 82 6.0 4.0 5.0 2.7 115 chr2R 23356273 3` UTR Rpi + chr2R 23356330 3` UTR Rpi + chr2R 23356388 3` UTR,3` UTR Rpi +,CG3500 - chr2R_16_23355001 chr2R_23355001 RAL-757 1002 chr2R 23422649 23422677 chr2R 23422727 23422757 14 76 2.0 3.0 2.5 4.0 108 chr2R 23422649 intron CG9815 - chr2R 23422703 intron CG9815 - chr2R 23422757 intron CG9815 - chr2R_14_23420001 chr2R_23420001 RAL-757 1003 chr2R 23429215 23429238 chr2R 23429440 23429463 13 220 5.0 2.5 3.8 2.7 248 chr2R 23429215 intron CG9815 - chr2R 23429339 intron CG9815 - chr2R 23429463 intron CG9815 - chr2R_13_23425001 chr2R_23425001 RAL-757 1004 chr2R 23450829 23450859 chr2R 23450912 23450942 12 82 2.5 4.5 3.5 2.7 113 chr2R 23450829 intron CG43795 + chr2R 23450886 intron CG43795 + chr2R 23450942 intron CG43795 + chr2R_12_23450001 chr2R_23450001 RAL-757 1005 chr2R 23570169 23570198 chr2R 23570311 23570315 8 129 1.5 0.5 1.0 4.0 146 chr2R 23570169 intron apt + chr2R 23570242 intron apt + chr2R 23570315 intron apt + chr2R_8_23570001 chr2R_23570001 RAL-757 1006 chr2R 23653970 23654003 chr2R 23654047 23654080 6 66 5.0 3.0 4.0 1.2 110 chr2R 23653970 3` UTR retn + chr2R 23654025 3` UTR retn + chr2R 23654080 3` UTR retn + chr2R_6_23650001 chr2R_23650001 RAL-757 1007 chr2R 23739186 23739206 chr2R 23739264 23739282 11 76 9.5 10.0 9.8 1.0 96 chr2R 23739186 intron egl - chr2R 23739234 intron egl - chr2R 23739282 intron egl - chr2R_11_23735001 chr2R_23735001 RAL-757 1008 chr2R 23739207 23739216 chr2R 23739261 23739290 8 71 5.5 8.5 7.0 1.0 83 chr2R 23739207 intron egl - chr2R 23739248 intron egl - chr2R 23739290 intron egl - chr2R_8_23735001 chr2R_23735001 RAL-757 1009 chr2R 23747070 23747089 chr2R 23747616 23747637 5 547 2.0 3.0 2.5 1.4 567 chr2R 23747070 intergenic egl -,CG13560 + chr2R 23747354 intergenic CG13560 + chr2R 23747637 exon CG13560 + chr2R_5_23745001 chr2R_23745001 RAL-757 1010 chr2R 23865826 23865858 chr2R 23865908 23865930 17 78 2.5 2.5 2.5 4.9 104 chr2R 23865826 intron CG5569 + chr2R 23865878 intron CG5569 + chr2R 23865930 intron CG5569 + chr2R_17_23865001 chr2R_23865001 RAL-757 1011 chr2R 24008412 24008443 chr2R 24008497 24008529 17 80 9.5 6.0 7.8 1.9 117 chr2R 24008412 intron Unc-89 - chr2R 24008470 intron Unc-89 - chr2R 24008529 intron Unc-89 - chr2R_17_24005001 chr2R_24005001 RAL-757 1012 chr2R 24031380 24031412 chr2R 24031464 24031496 20 80 4.0 3.0 3.5 4.4 116 chr2R 24031380 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031496 intergenic Chi -,CG30172 - chr2R_20_24030001 chr2R_24030001 RAL-757 1013 chr2R 24147077 24147090 chr2R 24154655 24154668 412 5 7577 4.0 3.5 3.8 1.0 7591 chr2R 24147077 intron Dat + chr2R 24150872 intron Dat + chr2R 24154668 intron Dat + chr2R_5_24150001 chr2R_24150001 RAL-757 1014 chr2R 24164389 24164408 chr2R 24164492 24164503 16 104 1.5 6.5 4.0 3.2 114 chr2R 24164389 intron CG3328 + chr2R 24164446 intron CG3328 + chr2R 24164503 intron CG3328 + chr2R_16_24160001 chr2R_24160001 RAL-757 1015 chr2R 24177234 24177267 chr2R 24184719 24184752 412 22 7483 13.5 7.5 10.5 1.9 7518 chr2R 24177234 3` UTR Nop60B + chr2R 24180993 intron Nop60B + chr2R 24184752 3` UTR Nop60B + chr2R_22_24180001 chr2R_24180001 RAL-757 1016 chr2R 24202504 24202531 chr2R 24202590 24202618 7 82 2.5 2.0 2.2 2.2 114 chr2R 24202504 exon CG11406 - chr2R 24202561 exon CG11406 - chr2R 24202618 intron CG11406 - chr2R_7_24200001 chr2R_24200001 RAL-757 1017 chr2R 24278319 24278358 chr2R 24278403 24278436 9 80 0.0 4.5 2.2 2.8 117 chr2R 24278319 intron nvy + chr2R 24278378 intron nvy + chr2R 24278436 intron nvy + chr2R_9_24275001 chr2R_24275001 RAL-757 1018 chr2R 24353426 24353454 chr2R 24361788 24361800 roo 12 8357 6.5 7.0 6.8 1.5 8374 chr2R 24353426 intron,intron bs +,CR44811 - chr2R 24357613 intron,intron bs +,CR44811 - chr2R 24361800 intron,intron bs +,CR44811 - chr2R_12_24355001 chr2R_24355001 RAL-757 1019 chr2R 24430920 24430930 chr2R 24431007 24431018 4 86 0.0 4.5 2.2 1.2 98 chr2R 24430920 intergenic CG15873 -,Pgam5-2 - chr2R 24430969 intergenic CG15873 -,Pgam5-2 - chr2R 24431018 intergenic CG15873 -,Pgam5-2 - chr2R_4_24430001 chr2R_24430001 RAL-757 1020 chr2R 24430931 24430949 chr2R 24431006 24431030 12 77 0.0 4.0 2.0 4.0 99 chr2R 24430931 intergenic CG15873 -,Pgam5-2 - chr2R 24430980 intergenic CG15873 -,Pgam5-2 - chr2R 24431030 intergenic Pgam5-2 -,CG15873 - chr2R_12_24430001 chr2R_24430001 RAL-757 1021 chr2R 24636903 24636931 chr2R 24636989 24637017 13 85 3.0 0.0 1.5 5.2 114 chr2R 24636903 intron CG13594 - chr2R 24636960 intron CG13594 - chr2R 24637017 intron CG13594 - chr2R_13_24635001 chr2R_24635001 RAL-757 1022 chr2R 24647591 24647618 chr2R 24655148 24655166 412 5 7553 8.0 3.5 5.8 0.7 7575 chr2R 24647591 intergenic not near genes chr2R 24651378 intergenic not near genes chr2R 24655166 intergenic not near genes chr2R_5_24650001 chr2R_24650001 RAL-757 1023 chr2R 24688976 24688992 chr2R 24689042 24689066 9 73 1.5 2.5 2.0 3.0 90 chr2R 24688976 intergenic not near genes chr2R 24689021 intergenic not near genes chr2R 24689066 intergenic not near genes chr2R_9_24685001 chr2R_24685001 RAL-757 1024 chr2R 24727882 24727918 chr2R 24735390 24735418 mdg1 12 7502 1.5 4.0 2.8 3.2 7536 chr2R 24727882 intron Mid1 - chr2R 24731650 intron Mid1 - chr2R 24735418 intron Mid1 - chr2R_12_24730001 chr2R_24730001 RAL-757 1025 chr2R 24763618 24763642 chr2R 24765589 24765616 G2 6 1970 4.5 4.0 4.2 1.2 1998 chr2R 24763618 exon CG3894 + chr2R 24764617 intron CG3894 + chr2R 24765616 exon CG3894 + chr2R_6_24760001 chr2R_24760001 RAL-757 1026 chr2R 24861719 24861755 chr2R 24861805 24861837 7 83 2.0 6.5 4.2 1.3 118 chr2R 24861719 intergenic not near genes chr2R 24861778 intergenic not near genes chr2R 24861837 intergenic not near genes chr2R_7_24860001 chr2R_24860001 RAL-757 1027 chr2R 24880748 24880783 chr2R 24880829 24880845 16 77 5.5 3.5 4.5 2.9 97 chr2R 24880748 3` UTR CG44247 + chr2R 24880796 3` UTR CG44247 + chr2R 24880845 3` UTR CG44247 + chr2R_16_24880001 chr2R_24880001 RAL-757 1028 chr2R 24927845 24927872 chr2R 24927928 24927955 17 80 6.5 5.5 6.0 2.4 110 chr2R 24927845 intron pain - chr2R 24927900 intron pain - chr2R 24927955 intron pain - chr2R_17_24925001 chr2R_24925001 RAL-757 1029 chr2R 25022642 25022673 chr2R 25022725 25022757 18 78 3.0 8.0 5.5 2.8 115 chr2R 25022642 intron uzip + chr2R 25022700 intron uzip + chr2R 25022757 intron uzip + chr2R_18_25020001 chr2R_25020001 RAL-757 1030 chr2R 25097859 25097886 chr2R 25097957 25097974 4 91 1.5 5.0 3.2 1.0 115 chr2R 25097859 intron lov - chr2R 25097916 intron lov - chr2R 25097974 intron lov - chr2R_4_25095001 chr2R_25095001 RAL-757 1031 chr2R 25141655 25141669 chr2R 25159345 25159358 roo 7 17688 8.0 9.0 8.5 0.7 17703 chr2R 25141655 intergenic not near genes chr2R 25150506 intergenic not near genes chr2R 25159358 intergenic not near genes chr2R_7_25150001 chr2R_25150001 RAL-757 1032 chr2R 25193341 25193361 chr2R 25193483 25193502 5 142 8.0 0.5 4.2 1.0 161 chr2R 25193341 intron CG9380 - chr2R 25193422 intron CG9380 - chr2R 25193502 intron CG9380 - chr2R_5_25190001 chr2R_25190001 RAL-757 1033 chr2R 25234765 25234799 chr2R 25234845 25234879 7 74 6.0 4.0 5.0 1.2 114 chr2R 25234765 intron CG9380 - chr2R 25234822 intron CG9380 - chr2R 25234879 intron CG9380 - chr2R_7_25230001 chr2R_25230001 RAL-757 1034 chr2R 25253443 25253473 chr2R 25253519 25253549 8 74 4.5 6.5 5.5 1.2 106 chr2R 25253443 intron,intron CG9380 -,CG30428 + chr2R 25253496 intron,intron CG9380 -,CG30428 + chr2R 25253549 intron,intron CG9380 -,CG30428 + chr2R_8_25250001 chr2R_25250001 RAL-757 1035 chr2R 25253474 25253475 chr2R 25253518 25253551 4 63 4.5 6.0 5.2 0.6 77 chr2R 25253474 intron,intron CG9380 -,CG30428 + chr2R 25253512 intron,intron CG9380 -,CG30428 + chr2R 25253551 intron,intron CG9380 -,CG30428 + chr2R_4_25250001 chr2R_25250001 RAL-757 1036 chr3L 68981 69014 chr3L 69068 69076 14 81 2.0 8.5 5.2 2.3 95 chr3L 68981 3` UTR Lsp1gamma + chr3L 69028 intergenic Lsp1gamma +,CR44510 + chr3L 69076 intergenic CR44510 +,Lsp1gamma + chr3L_14_65001 chr3L_65001 RAL-757 1037 chr3L 93789 93812 chr3L 93869 93882 5 76 8.5 4.5 6.5 0.7 93 chr3L 93789 intergenic not near genes chr3L 93836 intergenic not near genes chr3L 93882 intergenic not near genes chr3L_5_90001 chr3L_90001 RAL-757 1038 chr3L 106000 106026 chr3L 106129 106155 19 126 7.0 4.0 5.5 2.9 155 chr3L 106000 intergenic not near genes chr3L 106078 intergenic not near genes chr3L 106155 intergenic not near genes chr3L_19_105001 chr3L_105001 RAL-757 1039 chr3L 110211 110228 chr3L 119378 119394 roo 8 9165 13.0 4.0 8.5 0.8 9183 chr3L 110211 intergenic not near genes chr3L 114802 intergenic not near genes chr3L 119394 intergenic not near genes chr3L_8_110001 chr3L_110001 RAL-757 1040 chr3L 110229 110242 chr3L 119377 119409 roo 8 9161 7.5 4.0 5.8 1.2 9180 chr3L 110229 intergenic not near genes chr3L 114819 intergenic not near genes chr3L 119409 intergenic not near genes chr3L_8_110001 chr3L_110001 RAL-757 1041 chr3L 161710 161719 chr3L 162534 162545 6 824 3.0 4.5 3.8 1.2 835 chr3L 161710 intron p130CAS + chr3L 162128 intron p130CAS + chr3L 162545 intron p130CAS + chr3L_6_160001 chr3L_160001 RAL-757 1042 chr3L 165680 165711 chr3L 165817 165837 15 133 3.5 8.0 5.8 2.2 157 chr3L 165680 intron p130CAS + chr3L 165758 intron p130CAS + chr3L 165837 intron p130CAS + chr3L_15_165001 chr3L_165001 RAL-757 1043 chr3L 375272 375274 chr3L 375337 375343 5 67 0.0 7.0 3.5 1.1 71 chr3L 375272 intron trh - chr3L 375308 intron trh - chr3L 375343 intron trh - chr3L_5_375001 chr3L_375001 RAL-757 1044 chr3L 376122 376155 chr3L 376201 376232 15 78 2.5 3.5 3.0 3.8 110 chr3L 376122 intron trh - chr3L 376177 intron trh - chr3L 376232 intron trh - chr3L_15_375001 chr3L_375001 RAL-757 1045 chr3L 402690 402718 chr3L 409740 409771 297 11 7047 4.5 3.0 3.8 2.3 7081 chr3L 402690 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409771 intergenic not near genes chr3L_11_405001 chr3L_405001 RAL-757 1046 chr3L 445574 445581 chr3L 445650 445656 6 76 2.5 2.0 2.2 1.9 82 chr3L 445574 intron klar - chr3L 445615 intron klar - chr3L 445656 intron klar - chr3L_6_445001 chr3L_445001 RAL-757 1047 chr3L 457036 457046 chr3L 457114 457124 8 76 3.5 2.0 2.8 2.1 88 chr3L 457036 intron klar - chr3L 457080 intron klar - chr3L 457124 intron klar - chr3L_8_455001 chr3L_455001 RAL-757 1048 chr3L 459969 460007 chr3L 460046 460084 18 73 4.0 8.5 6.2 2.5 115 chr3L 459969 intron klar - chr3L 460026 intron klar - chr3L 460084 intron klar - chr3L_18_460001 chr3L_460001 RAL-757 1049 chr3L 467461 467625 chr3L 467536 467678 7 73 8.0 11.5 9.8 0.6 217 chr3L 467461 intron klar - chr3L 467570 intron klar - chr3L 467678 intron klar - chr3L_7_465001 chr3L_465001 RAL-757 1050 chr3L 502782 502801 chr3L 502865 502884 5 83 5.0 4.0 4.5 0.9 102 chr3L 502782 intron klar - chr3L 502833 intron klar - chr3L 502884 intron klar - chr3L_5_500001 chr3L_500001 RAL-757 1051 chr3L 514288 514304 chr3L 514354 514381 12 75 6.0 7.0 6.5 1.6 93 chr3L 514288 intron klar - chr3L 514334 intron klar - chr3L 514381 intron klar - chr3L_12_510001 chr3L_510001 RAL-757 1052 chr3L 535044 535079 chr3L 535126 535161 14 75 3.0 11.5 7.2 1.7 117 chr3L 535044 intron klar - chr3L 535102 intron klar - chr3L 535161 intron klar - chr3L_14_535001 chr3L_535001 RAL-757 1053 chr3L 642473 642500 chr3L 642558 642591 6 84 4.0 4.0 4.0 1.2 118 chr3L 642473 5` UTR CR43334 + chr3L 642532 5` UTR CR43334 + chr3L 642591 5` UTR CR43334 + chr3L_6_640001 chr3L_640001 RAL-757 1054 chr3L 651388 651424 chr3L 651474 651512 32 86 2.5 6.0 4.2 6.2 124 chr3L 651388 intergenic Gale +,CG3402 - chr3L 651450 intergenic CG3402 -,Gale + chr3L 651512 intergenic CG3402 -,Gale + chr3L_32_650001 chr3L_650001 RAL-757 1055 chr3L 705245 705262 chr3L 705321 705337 15 74 6.0 3.5 4.8 2.6 92 chr3L 705245 intergenic CR44514 + chr3L 705291 intergenic CR44514 + chr3L 705337 5` UTR CR44514 + chr3L_15_705001 chr3L_705001 RAL-757 1056 chr3L 705901 705916 chr3L 705997 706012 11 95 12.5 7.0 9.8 1.0 111 chr3L 705901 intergenic CG13895 -,CR44514 + chr3L 705956 3` UTR CG13895 - chr3L 706012 3` UTR CG13895 - chr3L_11_705001 chr3L_705001 RAL-757 1057 chr3L 717905 717914 chr3L 717980 718003 7 82 0.0 5.0 2.5 2.0 98 chr3L 717905 intergenic not near genes chr3L 717954 intergenic not near genes chr3L 718003 intergenic not near genes chr3L_7_715001 chr3L_715001 RAL-757 1058 chr3L 756787 756792 chr3L 756837 756867 4 68 4.5 2.5 3.5 0.9 80 chr3L 756787 intergenic not near genes chr3L 756827 intergenic not near genes chr3L 756867 intergenic not near genes chr3L_4_755001 chr3L_755001 RAL-757 1059 chr3L 789923 789933 chr3L 790401 790411 roo 6 478 2.5 0.5 1.5 2.4 488 chr3L 789923 intergenic not near genes chr3L 790167 intergenic not near genes chr3L 790411 intergenic not near genes chr3L_6_790001 chr3L_790001 RAL-757 1060 chr3L 925174 925209 chr3L 932600 932602 mdg1 25 7423 6.5 5.5 6.0 3.6 7428 chr3L 925174 intron Glut1 + chr3L 928888 intron Glut1 + chr3L 932602 intron Glut1 + chr3L_25_925001 chr3L_925001 RAL-757 1061 chr3L 933872 933905 chr3L 933998 934015 7 124 2.0 2.5 2.2 2.2 143 chr3L 933872 intron Glut1 + chr3L 933944 intron Glut1 + chr3L 934015 intron Glut1 + chr3L_7_930001 chr3L_930001 RAL-757 1062 chr3L 939770 939795 chr3L 940891 940907 jockey 15 1118 8.0 6.5 7.2 1.8 1137 chr3L 939770 intron Glut1 + chr3L 940338 intron Glut1 + chr3L 940907 intron Glut1 + chr3L_15_940001 chr3L_940001 RAL-757 1063 chr3L 939797 939806 chr3L 940889 940918 jockey 8 1114 6.0 6.0 6.0 1.1 1121 chr3L 939797 intron Glut1 + chr3L 940358 intron Glut1 + chr3L 940918 intron Glut1 + chr3L_8_940001 chr3L_940001 RAL-757 1064 chr3L 1003053 1003080 chr3L 1003129 1003156 10 75 2.5 7.5 5.0 1.7 103 chr3L 1003053 intron trio - chr3L 1003104 intron trio - chr3L 1003156 intron trio - chr3L_10_1000001 chr3L_1000001 RAL-757 1065 chr3L 1011001 1011020 chr3L 1011082 1011101 6 81 2.0 8.5 5.2 1.0 100 chr3L 1011001 intron trio - chr3L 1011051 intron trio - chr3L 1011101 intron trio - chr3L_6_1010001 chr3L_1010001 RAL-757 1066 chr3L 1011022 1011026 chr3L 1011077 1011106 5 75 1.0 7.5 4.2 1.0 84 chr3L 1011022 intron trio - chr3L 1011064 intron trio - chr3L 1011106 intron trio - chr3L_5_1010001 chr3L_1010001 RAL-757 1067 chr3L 1015035 1015052 chr3L 1015141 1015157 5 108 5.5 4.0 4.8 0.9 122 chr3L 1015035 intron trio - chr3L 1015096 intron trio - chr3L 1015157 intron trio - chr3L_5_1015001 chr3L_1015001 RAL-757 1068 chr3L 1033329 1033337 chr3L 1033435 1033443 4 106 1.0 0.0 0.5 2.7 114 chr3L 1033329 intron trio - chr3L 1033386 intron trio - chr3L 1033443 intron trio - chr3L_4_1030001 chr3L_1030001 RAL-757 1069 chr3L 1040548 1040580 chr3L 1040632 1040649 17 81 7.5 3.5 5.5 2.6 101 chr3L 1040548 intron bab1 - chr3L 1040598 intron bab1 - chr3L 1040649 intron bab1 - chr3L_17_1040001 chr3L_1040001 RAL-757 1070 chr3L 1109638 1109666 chr3L 1109720 1109724 13 81 3.5 5.5 4.5 2.4 86 chr3L 1109638 intergenic not near genes chr3L 1109681 intergenic not near genes chr3L 1109724 intergenic not near genes chr3L_13_1105001 chr3L_1105001 RAL-757 1071 chr3L 1154132 1154160 chr3L 1163282 1163290 roo 9 9147 4.5 4.0 4.2 1.7 9158 chr3L 1154132 intron bab2 - chr3L 1158711 intron bab2 - chr3L 1163290 intron bab2 - chr3L_9_1155001 chr3L_1155001 RAL-757 1072 chr3L 1177654 1177668 chr3L 1177732 1177746 7 77 3.0 3.0 3.0 1.8 92 chr3L 1177654 intergenic bab2 - chr3L 1177700 intergenic bab2 - chr3L 1177746 intergenic bab2 - chr3L_7_1175001 chr3L_1175001 RAL-757 1073 chr3L 1219594 1219625 chr3L 1227327 1227358 412 10 7729 1.0 6.0 3.5 2.2 7764 chr3L 1219594 intron mwh + chr3L 1223476 intron mwh + chr3L 1227358 intron mwh + chr3L_10_1220001 chr3L_1220001 RAL-757 1074 chr3L 1260142 1260163 chr3L 1260222 1260243 11 80 2.0 2.5 2.2 3.4 101 chr3L 1260142 intron CG9134 + chr3L 1260192 intron CG9134 + chr3L 1260243 intron CG9134 + chr3L_11_1260001 chr3L_1260001 RAL-757 1075 chr3L 1374433 1374469 chr3L 1374506 1374516 8 65 7.5 4.5 6.0 1.1 83 chr3L 1374433 intron,intron Ptp61F -,ru + chr3L 1374474 intron,intron Ptp61F -,ru + chr3L 1374516 intron,intron Ptp61F -,ru + chr3L_8_1370001 chr3L_1370001 RAL-757 1076 chr3L 1396745 1396758 chr3L 1396822 1396827 7 80 23.5 23.5 23.5 0.3 82 chr3L 1396745 intron Ptp61F - chr3L 1396786 intron Ptp61F - chr3L 1396827 intron Ptp61F - chr3L_7_1395001 chr3L_1395001 RAL-757 1077 chr3L 1463418 1463432 chr3L 1463497 1463513 5 81 12.0 3.5 7.8 0.6 95 chr3L 1463418 intron Ptp61F - chr3L 1463466 intron Ptp61F - chr3L 1463513 intron Ptp61F - chr3L_5_1460001 chr3L_1460001 RAL-757 1078 chr3L 1477393 1477417 chr3L 1477483 1477507 7 90 3.0 0.5 1.8 2.5 114 chr3L 1477393 intron stet - chr3L 1477450 intron stet - chr3L 1477507 intron stet - chr3L_7_1475001 chr3L_1475001 RAL-757 1079 chr3L 1505996 1506033 chr3L 1513592 1513619 17.6 17 7587 4.5 7.5 6.0 2.4 7623 chr3L 1505996 intron,intron Psa +,cue - chr3L 1509808 intron,intron Psa +,cue - chr3L 1513619 intron,intron Psa +,cue - chr3L_17_1505001 chr3L_1505001 RAL-757 1080 chr3L 1536876 1536886 chr3L 1536942 1536970 4 80 4.5 5.0 4.8 0.7 94 chr3L 1536876 intergenic CG12091 -,CG7852 + chr3L 1536923 intergenic CG12091 -,CG7852 + chr3L 1536970 intergenic CG12091 -,CG7852 + chr3L_4_1535001 chr3L_1535001 RAL-757 1081 chr3L 1662899 1662924 chr3L 1662975 1662985 15 73 5.5 1.5 3.5 3.3 86 chr3L 1662899 intron CG7971 - chr3L 1662942 intron CG7971 - chr3L 1662985 intron CG7971 - chr3L_15_1660001 chr3L_1660001 RAL-757 1082 chr3L 1729188 1729215 chr3L 1729277 1729277 8 86 8.0 6.0 7.0 1.0 89 chr3L 1729188 intron drpr - chr3L 1729232 intron drpr - chr3L 1729277 intron drpr - chr3L_8_1725001 chr3L_1725001 RAL-757 1083 chr3L 1740859 1740885 chr3L 1741096 1741128 pogo 9 240 5.5 12.5 9.0 0.9 269 chr3L 1740859 intron Gk + chr3L 1740994 intron Gk + chr3L 1741128 intron Gk + chr3L_9_1740001 chr3L_1740001 RAL-757 1084 chr3L 1923006 1923042 chr3L 1923096 1923131 10 83 2.5 3.0 2.8 2.6 125 chr3L 1923006 intron Dbx + chr3L 1923068 intron Dbx + chr3L 1923131 intron Dbx + chr3L_10_1920001 chr3L_1920001 RAL-757 1085 chr3L 1993077 1993103 chr3L 1993155 1993186 11 81 3.0 3.0 3.0 2.8 109 chr3L 1993077 intergenic not near genes chr3L 1993132 intergenic not near genes chr3L 1993186 intergenic not near genes chr3L_11_1990001 chr3L_1990001 RAL-757 1086 chr3L 2108256 2108284 chr3L 2113454 2113488 copia 16 5201 4.5 4.5 4.5 2.9 5232 chr3L 2108256 intron sls - chr3L 2110872 intron sls - chr3L 2113488 intron sls - chr3L_16_2110001 chr3L_2110001 RAL-757 1087 chr3L 2168776 2168807 chr3L 2168861 2168862 13 85 2.5 1.5 2.0 4.3 86 chr3L 2168776 exon CG15879 - chr3L 2168819 intron CG15879 - chr3L 2168862 intron CG15879 - chr3L_13_2165001 chr3L_2165001 RAL-757 1088 chr3L 2279049 2279068 chr3L 2279188 2279214 9 141 0.0 8.5 4.2 1.7 165 chr3L 2279049 intergenic not near genes chr3L 2279132 intergenic not near genes chr3L 2279214 intergenic not near genes chr3L_9_2275001 chr3L_2275001 RAL-757 1089 chr3L 2282996 2283023 chr3L 2283072 2283098 5 74 4.0 4.5 4.2 1.0 102 chr3L 2282996 5` UTR MsR2 + chr3L 2283047 5` UTR MsR2 + chr3L 2283098 5` UTR MsR2 + chr3L_5_2280001 chr3L_2280001 RAL-757 1090 chr3L 2293404 2293425 chr3L 2293469 2293481 12 75 4.0 2.5 3.2 2.9 77 chr3L 2293404 intron MsR2 + chr3L 2293442 intron MsR2 + chr3L 2293481 intron MsR2 + chr3L_12_2290001 chr3L_2290001 RAL-757 1091 chr3L 2308004 2308034 chr3L 2308110 2308114 11 101 6.0 4.5 5.2 1.8 110 chr3L 2308004 intergenic not near genes chr3L 2308059 intergenic not near genes chr3L 2308114 intergenic not near genes chr3L_11_2305001 chr3L_2305001 RAL-757 1092 chr3L 2331581 2331609 chr3L 2331658 2331686 6 76 8.0 7.0 7.5 0.7 105 chr3L 2331581 intron MsR1 + chr3L 2331634 intron MsR1 + chr3L 2331686 intron MsR1 + chr3L_6_2330001 chr3L_2330001 RAL-757 1093 chr3L 2411336 2411344 chr3L 2411416 2411420 5 78 1.5 0.5 1.0 2.5 84 chr3L 2411336 intron CG45186 + chr3L 2411378 intron CG45186 + chr3L 2411420 intron CG45186 + chr3L_5_2410001 chr3L_2410001 RAL-757 1094 chr3L 2447503 2447536 chr3L 2456659 2456692 roo 8 9153 3.0 10.0 6.5 1.1 9189 chr3L 2447503 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456692 intron CG45186 + chr3L_8_2450001 chr3L_2450001 RAL-757 1095 chr3L 2459153 2459162 chr3L 2459313 2459320 4 160 4.0 10.5 7.2 0.5 167 chr3L 2459153 intron CG45186 + chr3L 2459236 intron CG45186 + chr3L 2459320 intron CG45186 + chr3L_4_2455001 chr3L_2455001 RAL-757 1096 chr3L 2479474 2479479 chr3L 2479560 2479572 4 89 0.0 10.5 5.2 0.6 98 chr3L 2479474 intron CG45186 + chr3L 2479523 intron CG45186 + chr3L 2479572 intron CG45186 + chr3L_4_2475001 chr3L_2475001 RAL-757 1097 chr3L 2492316 2492328 chr3L 2492407 2492419 6 90 3.0 8.0 5.5 0.9 103 chr3L 2492316 intron,3` UTR CG45186 +,CG1146 + chr3L 2492368 intron,3` UTR CG45186 +,CG1146 + chr3L 2492419 intron,3` UTR CG45186 +,CG1146 + chr3L_6_2490001 chr3L_2490001 RAL-757 1098 chr3L 2493827 2493849 chr3L 2493901 2493921 11 76 2.5 5.0 3.8 2.3 94 chr3L 2493827 intron CG45186 + chr3L 2493874 intron CG45186 + chr3L 2493921 intron CG45186 + chr3L_11_2490001 chr3L_2490001 RAL-757 1099 chr3L 2533672 2533680 chr3L 2533728 2533762 6 69 6.0 5.0 5.5 0.9 90 chr3L 2533672 intron Spn - chr3L 2533717 intron Spn - chr3L 2533762 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-757 1100 chr3L 2548303 2548336 chr3L 2548387 2548398 13 78 6.0 8.0 7.0 1.6 95 chr3L 2548303 intron Spn - chr3L 2548350 intron Spn - chr3L 2548398 intron Spn - chr3L_13_2545001 chr3L_2545001 RAL-757 1101 chr3L 2683949 2683976 chr3L 2684019 2684046 10 72 8.5 0.0 4.2 1.9 97 chr3L 2683949 intron Fife - chr3L 2683998 intron Fife - chr3L 2684046 intron Fife - chr3L_10_2680001 chr3L_2680001 RAL-757 1102 chr3L 2719539 2719558 chr3L 2719637 2719650 9 99 6.5 2.5 4.5 1.6 111 chr3L 2719539 3` UTR Mrtf - chr3L 2719594 3` UTR Mrtf - chr3L 2719650 3` UTR Mrtf - chr3L_9_2715001 chr3L_2715001 RAL-757 1103 chr3L 2795724 2795749 chr3L 2795847 2795872 7 122 3.5 4.0 3.8 1.5 148 chr3L 2795724 intron CG43444 - chr3L 2795798 intron CG43444 - chr3L 2795872 intron CG43444 - chr3L_7_2795001 chr3L_2795001 RAL-757 1104 chr3L 2854486 2854500 chr3L 2854558 2854577 7 77 4.5 2.5 3.5 1.6 91 chr3L 2854486 intron CG43444 - chr3L 2854532 intron CG43444 - chr3L 2854577 intron CG43444 - chr3L_7_2850001 chr3L_2850001 RAL-757 1105 chr3L 2899579 2899607 chr3L 2899689 2899713 13 111 6.5 3.5 5.0 2.2 134 chr3L 2899579 intron Shab + chr3L 2899646 intron Shab + chr3L 2899713 intron Shab + chr3L_13_2895001 chr3L_2895001 RAL-757 1106 chr3L 2904457 2904486 chr3L 2904541 2904564 9 83 4.5 3.5 4.0 1.8 107 chr3L 2904457 intron Shab + chr3L 2904510 intron Shab + chr3L 2904564 intron Shab + chr3L_9_2900001 chr3L_2900001 RAL-757 1107 chr3L 2927853 2927859 chr3L 2936116 2936136 Tirant 4 8271 8.5 3.5 6.0 0.6 8283 chr3L 2927853 intron Shab + chr3L 2931994 intron Shab + chr3L 2936136 intron Shab + chr3L_4_2930001 chr3L_2930001 RAL-757 1108 chr3L 2966191 2966196 chr3L 2966286 2966291 4 95 9.0 2.5 5.8 0.6 100 chr3L 2966191 intergenic not near genes chr3L 2966241 intergenic not near genes chr3L 2966291 intergenic not near genes chr3L_4_2965001 chr3L_2965001 RAL-757 1109 chr3L 2966197 2966218 chr3L 2966284 2966293 11 90 2.5 2.5 2.5 3.1 96 chr3L 2966197 intergenic not near genes chr3L 2966245 intergenic not near genes chr3L 2966293 intergenic not near genes chr3L_11_2965001 chr3L_2965001 RAL-757 1110 chr3L 2966722 2966731 chr3L 2974145 2974155 mdg1 7 7424 10.5 2.5 6.5 0.9 7433 chr3L 2966722 intergenic not near genes chr3L 2970438 intergenic not near genes chr3L 2974155 intergenic not near genes chr3L_7_2970001 chr3L_2970001 RAL-757 1111 chr3L 2983296 2983324 chr3L 2983378 2983392 10 77 4.5 1.5 3.0 2.5 96 chr3L 2983296 exon CG2107 + chr3L 2983344 3` UTR CG2107 + chr3L 2983392 3` UTR CG2107 + chr3L_10_2980001 chr3L_2980001 RAL-757 1112 chr3L 2987725 2987729 chr3L 2987790 2987811 4 78 3.5 1.5 2.5 1.1 86 chr3L 2987725 intergenic not near genes chr3L 2987768 intergenic not near genes chr3L 2987811 intergenic not near genes chr3L_4_2985001 chr3L_2985001 RAL-757 1113 chr3L 3040323 3040351 chr3L 3042112 3042139 S-element 5 1788 5.5 0.5 3.0 1.2 1816 chr3L 3040323 3` UTR CG2162 + chr3L 3041231 intergenic not near genes chr3L 3042139 intergenic Jafrac2 + chr3L_5_3040001 chr3L_3040001 RAL-757 1114 chr3L 3050902 3050928 chr3L 3050988 3051000 14 86 5.5 1.5 3.5 3.1 98 chr3L 3050902 intron CG32485 + chr3L 3050951 intron CG32485 + chr3L 3051000 intron CG32485 + chr3L_14_3050001 chr3L_3050001 RAL-757 1115 chr3L 3051744 3051754 chr3L 3051985 3051996 pogo 7 241 16.5 3.0 9.8 0.6 252 chr3L 3051744 3` UTR CG32485 + chr3L 3051870 intergenic CG32485 + chr3L 3051996 intergenic CG32485 + chr3L_7_3050001 chr3L_3050001 RAL-757 1116 chr3L 3102817 3102846 chr3L 3102903 3102931 7 85 5.0 4.0 4.5 1.3 114 chr3L 3102817 intron Cht7 - chr3L 3102874 intron Cht7 - chr3L 3102931 intron Cht7 - chr3L_7_3100001 chr3L_3100001 RAL-757 1117 chr3L 3252370 3252415 chr3L 3252488 3252507 5 121 0.0 3.5 1.8 1.8 137 chr3L 3252370 5` UTR CR43626 + chr3L 3252438 5` UTR CR43626 + chr3L 3252507 5` UTR CR43626 + chr3L_5_3250001 chr3L_3250001 RAL-757 1118 chr3L 3281462 3281471 chr3L 3281953 3281967 Doc 5 493 2.0 16.0 9.0 0.5 505 chr3L 3281462 intron CG12017 + chr3L 3281714 intron CG12017 + chr3L 3281967 intron CG12017 + chr3L_5_3280001 chr3L_3280001 RAL-757 1119 chr3L 3310298 3310325 chr3L 3310371 3310395 17 75 4.0 5.5 4.8 2.9 97 chr3L 3310298 intron ZnT63C + chr3L 3310346 intron ZnT63C + chr3L 3310395 intron ZnT63C + chr3L_17_3310001 chr3L_3310001 RAL-757 1120 chr3L 3475079 3475108 chr3L 3475521 3475550 jockey 8 440 4.5 2.0 3.2 1.9 471 chr3L 3475079 intron CG42324 + chr3L 3475314 intron CG42324 + chr3L 3475550 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-757 1121 chr3L 3484422 3484441 chr3L 3484491 3484518 4 69 9.5 2.5 6.0 0.6 96 chr3L 3484422 intron,intron CG42324 +,CG43074 - chr3L 3484470 intron,exon CG42324 +,CG43074 - chr3L 3484518 intron,intron CG42324 +,CG43074 - chr3L_4_3480001 chr3L_3480001 RAL-757 1122 chr3L 3494197 3494209 chr3L 3494274 3494286 4 77 6.5 1.5 4.0 0.8 89 chr3L 3494197 intron CG42324 + chr3L 3494242 intron CG42324 + chr3L 3494286 intron CG42324 + chr3L_4_3490001 chr3L_3490001 RAL-757 1123 chr3L 3512959 3512969 chr3L 3513039 3513049 5 80 12.5 8.5 10.5 0.4 90 chr3L 3512959 intergenic ImpE2 - chr3L 3513004 intergenic ImpE2 - chr3L 3513049 intergenic ImpE2 - chr3L_5_3510001 chr3L_3510001 RAL-757 1124 chr3L 3573169 3573190 chr3L 3573251 3573273 9 83 4.5 4.5 4.5 1.6 104 chr3L 3573169 intron Eip63E + chr3L 3573221 intron Eip63E + chr3L 3573273 intron Eip63E + chr3L_9_3570001 chr3L_3570001 RAL-757 1125 chr3L 3601297 3601328 chr3L 3606607 3606639 copia 13 5309 5.0 4.5 4.8 2.2 5342 chr3L 3601297 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606639 intron Eip63E + chr3L_13_3600001 chr3L_3600001 RAL-757 1126 chr3L 3672992 3673029 chr3L 3673099 3673136 12 103 2.0 4.0 3.0 3.0 144 chr3L 3672992 intergenic not near genes chr3L 3673064 intergenic not near genes chr3L 3673136 intergenic not near genes chr3L_12_3670001 chr3L_3670001 RAL-757 1127 chr3L 3709459 3709466 chr3L 3709539 3709548 6 81 1.0 1.0 1.0 3.0 89 chr3L 3709459 intergenic CR45675 + chr3L 3709504 intergenic not near genes chr3L 3709548 intergenic not near genes chr3L_6_3705001 chr3L_3705001 RAL-757 1128 chr3L 3720964 3720977 chr3L 3721046 3721059 5 80 14.5 4.5 9.5 0.5 95 chr3L 3720964 intron CG32264 - chr3L 3721012 intron CG32264 - chr3L 3721059 intron CG32264 - chr3L_5_3720001 chr3L_3720001 RAL-757 1129 chr3L 3763758 3763779 chr3L 3763838 3763844 8 75 4.0 1.0 2.5 2.3 86 chr3L 3763758 intron CG32264 - chr3L 3763801 intron CG32264 - chr3L 3763844 intron CG32264 - chr3L_8_3760001 chr3L_3760001 RAL-757 1130 chr3L 3797240 3797262 chr3L 3797321 3797345 10 80 6.0 6.5 6.2 1.4 105 chr3L 3797240 intron CG32264 - chr3L 3797292 intron CG32264 - chr3L 3797345 intron CG32264 - chr3L_10_3795001 chr3L_3795001 RAL-757 1131 chr3L 3815060 3815063 chr3L 3815134 3815144 7 79 10.5 3.5 7.0 0.9 84 chr3L 3815060 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815102 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815144 intron,intron Scsalpha +,CR43932 - chr3L_7_3815001 chr3L_3815001 RAL-757 1132 chr3L 3815066 3815078 chr3L 3815132 3815159 10 75 6.0 3.5 4.8 1.7 93 chr3L 3815066 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815112 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815159 intron,intron Scsalpha +,CR43932 - chr3L_10_3815001 chr3L_3815001 RAL-757 1133 chr3L 3826338 3826345 chr3L 3826425 3826432 4 87 8.0 2.0 5.0 0.7 94 chr3L 3826338 intron,intron enc +,Rdh + chr3L 3826385 intron,intron enc +,Rdh + chr3L 3826432 intron,intron enc +,Rdh + chr3L_4_3825001 chr3L_3825001 RAL-757 1134 chr3L 3833737 3833766 chr3L 3833978 3834007 pogo 10 240 1.5 3.0 2.2 3.1 270 chr3L 3833737 intron enc + chr3L 3833872 intron enc + chr3L 3834007 intron enc + chr3L_10_3830001 chr3L_3830001 RAL-757 1135 chr3L 3889133 3889146 chr3L 3889216 3889229 10 81 3.0 3.0 3.0 2.5 96 chr3L 3889133 intergenic not near genes chr3L 3889181 intergenic not near genes chr3L 3889229 intergenic not near genes chr3L_10_3885001 chr3L_3885001 RAL-757 1136 chr3L 3939891 3939906 chr3L 3940395 3940401 9 504 6.5 4.0 5.2 1.5 510 chr3L 3939891 intron CG12766 - chr3L 3940146 intergenic CG12766 -,CR43916 + chr3L 3940401 intergenic CR43916 +,CG12766 - chr3L_9_3940001 chr3L_3940001 RAL-757 1137 chr3L 3995001 3995009 chr3L 3995095 3995101 5 94 1.5 2.0 1.8 1.8 100 chr3L 3995001 intergenic not near genes chr3L 3995051 intergenic not near genes chr3L 3995101 intergenic not near genes chr3L_5_3995001 chr3L_3995001 RAL-757 1138 chr3L 4015735 4015762 chr3L 4015818 4015845 9 80 2.0 3.0 2.5 2.6 110 chr3L 4015735 intergenic not near genes chr3L 4015790 intergenic not near genes chr3L 4015845 intergenic not near genes chr3L_9_4015001 chr3L_4015001 RAL-757 1139 chr3L 4064260 4064277 chr3L 4064323 4064355 10 73 3.0 11.0 7.0 1.2 95 chr3L 4064260 3` UTR,3` UTR dib +,wit - chr3L 4064308 3` UTR,3` UTR dib +,wit - chr3L 4064355 3` UTR,3` UTR dib +,wit - chr3L_10_4060001 chr3L_4060001 RAL-757 1140 chr3L 4099385 4099448 chr3L 4099452 4099526 8 93 0.5 0.5 0.5 5.3 141 chr3L 4099385 intron CG14995 - chr3L 4099456 intron CG14995 - chr3L 4099526 intron CG14995 - chr3L_8_4095001 chr3L_4095001 RAL-757 1141 chr3L 4132959 4132973 chr3L 4133057 4133071 10 98 2.0 11.5 6.8 1.3 112 chr3L 4132959 intron ens - chr3L 4133015 intron ens - chr3L 4133071 intron ens - chr3L_10_4130001 chr3L_4130001 RAL-757 1142 chr3L 4146818 4146840 chr3L 4146895 4146917 12 76 0.0 3.5 1.8 4.3 99 chr3L 4146818 intergenic not near genes chr3L 4146868 intergenic not near genes chr3L 4146917 intergenic not near genes chr3L_12_4145001 chr3L_4145001 RAL-757 1143 chr3L 4209833 4209852 chr3L 4209910 4209930 9 78 2.5 1.5 2.0 3.0 97 chr3L 4209833 intron CG43367 + chr3L 4209882 intron CG43367 + chr3L 4209930 intron CG43367 + chr3L_9_4205001 chr3L_4205001 RAL-757 1144 chr3L 4328740 4328765 chr3L 4336238 4336263 412 19 7496 5.5 9.0 7.2 2.3 7523 chr3L 4328740 intron Cip4 - chr3L 4332502 intron Cip4 - chr3L 4336263 intron Cip4 - chr3L_19_4330001 chr3L_4330001 RAL-757 1145 chr3L 4342411 4342437 chr3L 4342490 4342491 9 73 6.5 2.0 4.2 1.7 80 chr3L 4342411 intron Cip4 - chr3L 4342451 intron Cip4 - chr3L 4342491 intron Cip4 - chr3L_9_4340001 chr3L_4340001 RAL-757 1146 chr3L 4364203 4364234 chr3L 4364291 4364323 8 89 1.0 3.0 2.0 2.7 120 chr3L 4364203 intergenic Cip4 -,mRpS6 + chr3L 4364263 intergenic Cip4 -,mRpS6 + chr3L 4364323 intergenic Cip4 -,mRpS6 + chr3L_8_4360001 chr3L_4360001 RAL-757 1147 chr3L 4484723 4484749 chr3L 4484801 4484826 13 77 3.0 8.5 5.8 1.9 103 chr3L 4484723 intergenic CG11350 +,CG13722 - chr3L 4484774 intergenic CG13722 -,CG11350 + chr3L 4484826 intergenic CG13722 -,CG11350 + chr3L_13_4480001 chr3L_4480001 RAL-757 1148 chr3L 4491898 4491907 chr3L 4491977 4491991 4 83 6.0 8.0 7.0 0.5 93 chr3L 4491898 intergenic not near genes chr3L 4491944 intergenic not near genes chr3L 4491991 intergenic not near genes chr3L_4_4490001 chr3L_4490001 RAL-757 1149 chr3L 4629628 4629641 chr3L 4629782 4629806 6 166 0.0 3.5 1.8 2.1 178 chr3L 4629628 3` UTR axo - chr3L 4629717 3` UTR axo - chr3L 4629806 3` UTR axo - chr3L_6_4625001 chr3L_4625001 RAL-757 1150 chr3L 4858316 4858336 chr3L 4858391 4858400 8 74 3.0 4.5 3.8 1.7 84 chr3L 4858316 intergenic not near genes chr3L 4858358 intergenic not near genes chr3L 4858400 intergenic not near genes chr3L_8_4855001 chr3L_4855001 RAL-757 1151 chr3L 3733330 3733339 chr3L 4877408 4877410 4 1144074 5.5 10.5 8.0 0.4 1144080 chr3L 3733330 intron CG32264 - chr3L 4305370 intron dyl - chr3L 4877410 intron CG17150 + chr3L_4_4305001 chr3L_4305001 RAL-757 1152 chr3L 4901130 4901161 chr3L 4907315 4907346 diver 12 6187 3.5 3.0 3.2 2.9 6216 chr3L 4901130 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907346 intergenic not near genes chr3L_12_4900001 chr3L_4900001 RAL-757 1153 chr3L 4907979 4907986 chr3L 4908055 4908062 4 76 3.0 2.0 2.5 1.1 83 chr3L 4907979 intergenic not near genes chr3L 4908020 intergenic not near genes chr3L 4908062 intergenic not near genes chr3L_4_4905001 chr3L_4905001 RAL-757 1154 chr3L 5034183 5034191 chr3L 5043316 5043341 roo 4 9144 3.0 4.5 3.8 0.8 9158 chr3L 5034183 intron Con - chr3L 5038762 intron Con - chr3L 5043341 intron Con - chr3L_4_5035001 chr3L_5035001 RAL-757 1155 chr3L 5045462 5045489 chr3L 5050235 5050242 Doc 14 4775 5.5 3.0 4.2 2.7 4780 chr3L 5045462 intron Con - chr3L 5047852 intron Con - chr3L 5050242 intron Con - chr3L_14_5045001 chr3L_5045001 RAL-757 1156 chr3L 5104484 5104491 chr3L 5124618 5124625 7 20133 10.0 8.0 9.0 0.7 20141 chr3L 5104484 intergenic not near genes chr3L 5114554 intergenic not near genes chr3L 5124625 intergenic not near genes chr3L_7_5110001 chr3L_5110001 RAL-757 1157 chr3L 5104494 5104510 chr3L 5124617 5124644 6 20132 3.5 8.0 5.8 0.9 20150 chr3L 5104494 intergenic not near genes chr3L 5114569 intergenic not near genes chr3L 5124644 intergenic not near genes chr3L_6_5110001 chr3L_5110001 RAL-757 1158 chr3L 5250076 5250114 chr3L 5250154 5250175 22 76 0.5 5.5 3.0 5.5 99 chr3L 5250076 intron shep - chr3L 5250126 intron shep - chr3L 5250175 intron shep - chr3L_22_5250001 chr3L_5250001 RAL-757 1159 chr3L 5271166 5271201 chr3L 5271244 5271279 4 78 0.5 0.0 0.2 3.3 113 chr3L 5271166 intron shep - chr3L 5271222 intron shep - chr3L 5271279 intron shep - chr3L_4_5270001 chr3L_5270001 RAL-757 1160 chr3L 5299156 5299184 chr3L 5306592 5306620 Quasimodo 11 7435 6.0 4.5 5.2 1.8 7464 chr3L 5299156 intergenic not near genes chr3L 5302888 intergenic not near genes chr3L 5306620 intergenic not near genes chr3L_11_5300001 chr3L_5300001 RAL-757 1161 chr3L 5310361 5310390 chr3L 5310482 5310516 8 125 2.0 4.5 3.2 1.9 155 chr3L 5310361 intergenic not near genes chr3L 5310438 intergenic not near genes chr3L 5310516 intergenic not near genes chr3L_8_5310001 chr3L_5310001 RAL-757 1162 chr3L 5327470 5327478 chr3L 5327555 5327555 4 83 7.0 7.0 7.0 0.5 85 chr3L 5327470 intergenic not near genes chr3L 5327512 intergenic not near genes chr3L 5327555 intergenic not near genes chr3L_4_5325001 chr3L_5325001 RAL-757 1163 chr3L 5339828 5339849 chr3L 5340072 5340093 7 243 3.5 6.0 4.8 1.2 265 chr3L 5339828 intergenic not near genes chr3L 5339960 intergenic not near genes chr3L 5340093 intergenic not near genes chr3L_7_5335001 chr3L_5335001 RAL-757 1164 chr3L 5387670 5387695 chr3L 5387922 5387951 5 253 2.0 5.5 3.8 1.0 281 chr3L 5387670 intergenic not near genes chr3L 5387810 intergenic not near genes chr3L 5387951 intergenic not near genes chr3L_5_5385001 chr3L_5385001 RAL-757 1165 chr3L 5396491 5396499 chr3L 5396558 5396586 6 80 0.0 3.5 1.8 2.1 95 chr3L 5396491 intergenic not near genes chr3L 5396538 intergenic not near genes chr3L 5396586 intergenic not near genes chr3L_6_5395001 chr3L_5395001 RAL-757 1166 chr3L 5445003 5445026 chr3L 5445326 5445350 15 325 3.5 5.0 4.2 2.9 347 chr3L 5445003 intergenic not near genes chr3L 5445176 intergenic not near genes chr3L 5445350 intergenic not near genes chr3L_15_5445001 chr3L_5445001 RAL-757 1167 chr3L 5490392 5490412 chr3L 5490532 5490552 14 144 2.0 2.0 2.0 4.7 160 chr3L 5490392 intergenic not near genes chr3L 5490472 intergenic not near genes chr3L 5490552 intergenic not near genes chr3L_14_5490001 chr3L_5490001 RAL-757 1168 chr3L 5504560 5504569 chr3L 5504638 5504642 6 76 3.5 1.0 2.2 1.9 82 chr3L 5504560 intron CG34342 - chr3L 5504601 intron CG34342 - chr3L 5504642 intron CG34342 - chr3L_6_5500001 chr3L_5500001 RAL-757 1169 chr3L 5537721 5537742 chr3L 5538063 5538077 jockey 5 337 9.0 6.0 7.5 0.6 356 chr3L 5537721 intergenic not near genes chr3L 5537899 intergenic not near genes chr3L 5538077 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 RAL-757 1170 chr3L 5537744 5537758 chr3L 5538061 5538088 jockey 7 333 3.5 5.5 4.5 1.3 344 chr3L 5537744 intergenic not near genes chr3L 5537916 intergenic CG10625 - chr3L 5538088 intergenic CG10625 - chr3L_7_5535001 chr3L_5535001 RAL-757 1171 chr3L 5633674 5633706 chr3L 5635260 5635292 18 1584 1.5 6.0 3.8 3.8 1618 chr3L 5633674 intron Blimp-1 + chr3L 5634483 intron Blimp-1 + chr3L 5635292 intron Blimp-1 + chr3L_18_5630001 chr3L_5630001 RAL-757 1172 chr3L 5872880 5872914 chr3L 5873149 5873179 14 266 3.5 7.0 5.2 2.3 299 chr3L 5872880 exon CG5568 + chr3L 5873030 exon CG5568 + chr3L 5873179 exon CG5568 + chr3L_14_5870001 chr3L_5870001 RAL-757 1173 chr3L 5910034 5910055 chr3L 5910275 5910296 pogo 13 239 9.5 10.0 9.8 1.2 262 chr3L 5910034 intron CG13288 + chr3L 5910165 intron CG13288 + chr3L 5910296 intron CG13288 + chr3L_13_5910001 chr3L_5910001 RAL-757 1174 chr3L 5926319 5926337 chr3L 5926504 5926510 BS 8 179 5.0 5.5 5.2 1.3 191 chr3L 5926319 intron Vap-33B + chr3L 5926414 intron Vap-33B + chr3L 5926510 intron Vap-33B + chr3L_8_5925001 chr3L_5925001 RAL-757 1175 chr3L 6001688 6001716 chr3L 6004383 6004416 jockey 11 2698 5.5 1.0 3.2 2.6 2728 chr3L 6001688 intron PVRAP + chr3L 6003052 intron PVRAP + chr3L 6004416 intron PVRAP + chr3L_11_6000001 chr3L_6000001 RAL-757 1176 chr3L 6040376 6040391 chr3L 6042727 6042747 Doc 13 2353 5.5 6.0 5.8 1.9 2371 chr3L 6040376 intergenic Jon65Aiv + chr3L 6041562 intergenic not near genes chr3L 6042747 intergenic not near genes chr3L_13_6040001 chr3L_6040001 RAL-757 1177 chr3L 6102954 6102964 chr3L 6103037 6103047 10 82 2.5 6.5 4.5 1.8 93 chr3L 6102954 intron Ets65A + chr3L 6103000 intron Ets65A + chr3L 6103047 intron Ets65A + chr3L_10_6100001 chr3L_6100001 RAL-757 1178 chr3L 6116699 6116724 chr3L 6116779 6116808 14 81 4.5 4.0 4.2 2.7 109 chr3L 6116699 intron Ets65A + chr3L 6116754 intron Ets65A + chr3L 6116808 intron Ets65A + chr3L_14_6115001 chr3L_6115001 RAL-757 1179 chr3L 6119142 6119172 chr3L 6119219 6119227 9 73 2.5 0.5 1.5 3.6 85 chr3L 6119142 exon Ets65A + chr3L 6119184 intron Ets65A + chr3L 6119227 intron Ets65A + chr3L_9_6115001 chr3L_6115001 RAL-757 1180 chr3L 6220913 6220946 chr3L 6230065 6230093 roo 10 9145 8.0 12.5 10.2 0.9 9180 chr3L 6220913 5` UTR pncr008:3L + chr3L 6225503 intergenic not near genes chr3L 6230093 intergenic not near genes chr3L_10_6225001 chr3L_6225001 RAL-757 1181 chr3L 6233313 6233342 chr3L 6233430 6233442 10 113 2.5 6.0 4.2 1.9 129 chr3L 6233313 5` UTR BG642312 - chr3L 6233378 5` UTR BG642312 - chr3L 6233442 intergenic CG42714 -,BG642312 - chr3L_10_6230001 chr3L_6230001 RAL-757 1182 chr3L 6266403 6266408 chr3L 6266459 6266484 6 70 1.5 6.0 3.8 1.2 81 chr3L 6266403 intergenic not near genes chr3L 6266444 intergenic not near genes chr3L 6266484 intergenic not near genes chr3L_6_6265001 chr3L_6265001 RAL-757 1183 chr3L 6267628 6267641 chr3L 6267705 6267724 4 82 4.0 12.5 8.2 0.4 96 chr3L 6267628 intergenic not near genes chr3L 6267676 intergenic not near genes chr3L 6267724 intergenic not near genes chr3L_4_6265001 chr3L_6265001 RAL-757 1184 chr3L 6325906 6325918 chr3L 6326205 6326225 12 300 47.5 17.5 32.5 0.4 319 chr3L 6325906 exon Or65b + chr3L 6326066 exon Or65b + chr3L 6326225 exon Or65b + chr3L_12_6325001 chr3L_6325001 RAL-757 1185 chr3L 6335018 6335032 chr3L 6335482 6335503 297 4 468 4.5 6.5 5.5 0.6 485 chr3L 6335018 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335503 intron CG13300 - chr3L_4_6335001 chr3L_6335001 RAL-757 1186 chr3L 6405657 6405666 chr3L 6432121 6432130 roo 4 26464 14.0 4.0 9.0 0.4 26473 chr3L 6405657 intron CG42747 + chr3L 6418894 intron CG42747 + chr3L 6432130 intron CG42747 + chr3L_4_6415001 chr3L_6415001 RAL-757 1187 chr3L 6405667 6405688 chr3L 6432120 6432152 roo 10 26463 8.0 4.0 6.0 1.4 26485 chr3L 6405667 intron CG42747 + chr3L 6418910 intron CG42747 + chr3L 6432152 intron CG42747 + chr3L_10_6415001 chr3L_6415001 RAL-757 1188 chr3L 6582487 6582494 chr3L 6582568 6582570 5 89 3.0 3.0 3.0 1.2 83 chr3L 6582487 intron,intron CG18769 +,jv - chr3L 6582528 intron,intron CG18769 +,jv - chr3L 6582570 intron,intron CG18769 +,jv - chr3L_5_6580001 chr3L_6580001 RAL-757 1189 chr3L 6604288 6604301 chr3L 6604350 6604378 9 74 1.0 3.5 2.2 2.8 90 chr3L 6604288 intron CG8368 + chr3L 6604333 intron CG8368 + chr3L 6604378 intron,3` UTR CG8368 +,zpg - chr3L_9_6600001 chr3L_6600001 RAL-757 1190 chr3L 6652080 6652110 chr3L 6652163 6652193 10 81 4.5 5.0 4.8 1.7 113 chr3L 6652080 intergenic not near genes chr3L 6652136 intergenic not near genes chr3L 6652193 intergenic not near genes chr3L_10_6650001 chr3L_6650001 RAL-757 1191 chr3L 6729295 6729321 chr3L 6729375 6729398 11 77 7.0 4.5 5.8 1.6 103 chr3L 6729295 3` UTR dikar - chr3L 6729346 3` UTR dikar - chr3L 6729398 3` UTR dikar - chr3L_11_6725001 chr3L_6725001 RAL-757 1192 chr3L 6768432 6768434 chr3L 9357113 9357113 5 2588680 15.0 6.0 10.5 0.4 2588681 chr3L 6768432 intergenic not near genes chr3L 8062772 intergenic not near genes chr3L 9357113 intron UGP - chr3L_5_8060001 chr3L_8060001 RAL-757 1193 chr3L 6781132 6781140 chr3L 6783140 6783153 Doc 5 2010 11.5 0.0 5.8 0.7 2021 chr3L 6781132 intergenic not near genes chr3L 6782142 intergenic not near genes chr3L 6783153 intergenic not near genes chr3L_5_6780001 chr3L_6780001 RAL-757 1194 chr3L 6820627 6820642 chr3L 6820711 6820726 5 82 8.0 10.0 9.0 0.5 99 chr3L 6820627 intergenic not near genes chr3L 6820676 intergenic not near genes chr3L 6820726 intergenic not near genes chr3L_5_6820001 chr3L_6820001 RAL-757 1195 chr3L 6855920 6855945 chr3L 6860703 6860727 Doc 5 4783 4.5 1.0 2.8 1.3 4807 chr3L 6855920 intergenic not near genes chr3L 6858324 intergenic not near genes chr3L 6860727 intergenic not near genes chr3L_5_6855001 chr3L_6855001 RAL-757 1196 chr3L 6887522 6887550 chr3L 6895014 6895042 roo 11 7488 4.0 6.0 5.0 1.8 7520 chr3L 6887522 intergenic not near genes chr3L 6891282 intergenic not near genes chr3L 6895042 intergenic not near genes chr3L_11_6890001 chr3L_6890001 RAL-757 1197 chr3L 6974502 6974513 chr3L 6974593 6974614 8 98 0.0 7.0 3.5 1.8 112 chr3L 6974502 intron Galphai - chr3L 6974558 intron Galphai - chr3L 6974614 intron Galphai - chr3L_8_6970001 chr3L_6970001 RAL-757 1198 chr3L 6974514 6974525 chr3L 6974592 6974626 8 96 0.0 7.0 3.5 1.8 112 chr3L 6974514 intron Galphai - chr3L 6974570 intron Galphai - chr3L 6974626 intron Galphai - chr3L_8_6970001 chr3L_6970001 RAL-757 1199 chr3L 6990724 6990745 chr3L 6990804 6990825 10 78 0.5 3.0 1.8 3.6 101 chr3L 6990724 5` UTR bin + chr3L 6990774 5` UTR bin + chr3L 6990825 5` UTR bin + chr3L_10_6990001 chr3L_6990001 RAL-757 1200 chr3L 6994887 6994916 chr3L 6995498 6995526 BS 4 608 0.5 1.5 1.0 2.0 639 chr3L 6994887 intergenic bin + chr3L 6995206 intergenic not near genes chr3L 6995526 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-757 1201 chr3L 7112591 7112611 chr3L 7112678 7112694 9 86 7.0 8.5 7.8 1.0 103 chr3L 7112591 intron form3 + chr3L 7112642 intron form3 + chr3L 7112694 intron form3 + chr3L_9_7110001 chr3L_7110001 RAL-757 1202 chr3L 7175040 7175053 chr3L 7175270 7175283 9 228 7.0 5.0 6.0 1.3 243 chr3L 7175040 intron Dscam2 - chr3L 7175162 intron Dscam2 - chr3L 7175283 intron Dscam2 - chr3L_9_7175001 chr3L_7175001 RAL-757 1203 chr3L 7175054 7175060 chr3L 7175269 7175290 6 227 5.5 5.0 5.2 1.0 236 chr3L 7175054 intron Dscam2 - chr3L 7175172 intron Dscam2 - chr3L 7175290 intron Dscam2 - chr3L_6_7175001 chr3L_7175001 RAL-757 1204 chr3L 7218092 7218110 chr3L 7218169 7218188 5 78 3.0 4.0 3.5 1.1 96 chr3L 7218092 intergenic not near genes chr3L 7218140 intergenic not near genes chr3L 7218188 intergenic not near genes chr3L_5_7215001 chr3L_7215001 RAL-757 1205 chr3L 7244934 7244950 chr3L 7245024 7245042 4 91 6.5 1.0 3.8 0.8 108 chr3L 7244934 exon mei-P22 + chr3L 7244988 exon mei-P22 + chr3L 7245042 exon mei-P22 + chr3L_4_7240001 chr3L_7240001 RAL-757 1206 chr3L 7288383 7288404 chr3L 7288468 7288489 5 85 1.5 7.0 4.2 1.0 106 chr3L 7288383 intron unc-13-4A - chr3L 7288436 intron unc-13-4A - chr3L 7288489 intron unc-13-4A - chr3L_5_7285001 chr3L_7285001 RAL-757 1207 chr3L 7377318 7377332 chr3L 7380423 7380429 297 6 3102 8.5 6.0 7.2 0.7 3111 chr3L 7377318 intron SMSr - chr3L 7378874 intron SMSr - chr3L 7380429 intron SMSr - chr3L_6_7375001 chr3L_7375001 RAL-757 1208 chr3L 7377333 7377347 chr3L 7380421 7380441 297 9 3100 7.0 5.0 6.0 1.3 3108 chr3L 7377333 intron SMSr - chr3L 7378887 intron SMSr - chr3L 7380441 intron SMSr - chr3L_9_7375001 chr3L_7375001 RAL-757 1209 chr3L 7426654 7426673 chr3L 7426786 7426801 9 130 3.5 6.5 5.0 1.5 147 chr3L 7426654 intron CG42458 + chr3L 7426728 intron CG42458 + chr3L 7426801 intron CG42458 + chr3L_9_7425001 chr3L_7425001 RAL-757 1210 chr3L 7450687 7450717 chr3L 7450770 7450790 6 78 3.5 2.0 2.8 1.6 103 chr3L 7450687 intron CG42458 + chr3L 7450738 intron CG42458 + chr3L 7450790 intron CG42458 + chr3L_6_7450001 chr3L_7450001 RAL-757 1211 chr3L 7498757 7498770 chr3L 7503534 7503547 F-element 4 4777 10.0 7.5 8.8 0.4 4790 chr3L 7498757 5` UTR CG8539 - chr3L 7501152 intergenic not near genes chr3L 7503547 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-757 1212 chr3L 7498772 7498790 chr3L 7503532 7503533 F-element 8 4771 4.5 7.0 5.8 1.2 4761 chr3L 7498772 5` UTR CG8539 - chr3L 7501152 intergenic not near genes chr3L 7503533 intergenic not near genes chr3L_8_7500001 chr3L_7500001 RAL-757 1213 chr3L 7711854 7711856 chr3L 7711905 7711931 4 62 1.0 6.0 3.5 0.9 77 chr3L 7711854 intron,intron CG32373 +,Ank2 - chr3L 7711892 intron,intron CG32373 +,Ank2 - chr3L 7711931 intron,intron CG32373 +,Ank2 - chr3L_4_7710001 chr3L_7710001 RAL-757 1214 chr3L 7790628 7790649 chr3L 7791072 7791103 15 450 4.5 5.5 5.0 2.5 475 chr3L 7790628 intron CG32369 - chr3L 7790866 intron CG32369 - chr3L 7791103 intron CG32369 - chr3L_15_7790001 chr3L_7790001 RAL-757 1215 chr3L 7793716 7793745 chr3L 7800764 7800789 297 13 7049 4.5 7.5 6.0 1.9 7073 chr3L 7793716 intron CG32369 - chr3L 7797252 intron CG32369 - chr3L 7800789 intron CG32369 - chr3L_13_7795001 chr3L_7795001 RAL-757 1216 chr3L 7860656 7860689 chr3L 7860748 7860781 10 83 4.5 1.5 3.0 2.5 125 chr3L 7860656 intron Pdp1 - chr3L 7860718 intron Pdp1 - chr3L 7860781 intron Pdp1 - chr3L_10_7860001 chr3L_7860001 RAL-757 1217 chr3L 7866226 7866234 chr3L 7866806 7866821 7 583 1.5 6.0 3.8 1.5 595 chr3L 7866226 intron Pdp1 - chr3L 7866524 intron Pdp1 - chr3L 7866821 intron Pdp1 - chr3L_7_7865001 chr3L_7865001 RAL-757 1218 chr3L 7886528 7886540 chr3L 7889035 7889058 Stalker4 11 2512 3.0 6.0 4.5 2.0 2530 chr3L 7886528 intron CG32365 + chr3L 7887793 intron CG32365 + chr3L 7889058 intron CG32365 + chr3L_11_7885001 chr3L_7885001 RAL-757 1219 chr3L 7916840 7916860 chr3L 7926001 7926031 roo 10 9168 6.0 5.0 5.5 1.5 9191 chr3L 7916840 3` UTR syd - chr3L 7921436 intron syd - chr3L 7926031 3` UTR syd - chr3L_10_7920001 chr3L_7920001 RAL-757 1220 chr3L 7985362 7985391 chr3L 7987690 7987719 NOF 10 2327 6.5 6.0 6.2 1.4 2357 chr3L 7985362 intron nmo + chr3L 7986540 intron nmo + chr3L 7987719 intron nmo + chr3L_10_7985001 chr3L_7985001 RAL-757 1221 chr3L 8004933 8004954 chr3L 8005122 8005123 6 188 5.0 9.5 7.2 0.7 190 chr3L 8004933 intron nmo + chr3L 8005028 intron nmo + chr3L 8005123 intron nmo + chr3L_6_8005001 chr3L_8005001 RAL-757 1222 chr3L 8019704 8019736 chr3L 8024115 8024152 NOF 5 4409 0.0 3.0 1.5 2.0 4448 chr3L 8019704 intron nmo + chr3L 8021928 intron nmo + chr3L 8024152 intron nmo + chr3L_5_8020001 chr3L_8020001 RAL-757 1223 chr3L 8028314 8028323 chr3L 8028415 8028424 10 101 9.0 8.0 8.5 1.1 110 chr3L 8028314 intron nmo + chr3L 8028369 intron nmo + chr3L 8028424 intron nmo + chr3L_10_8025001 chr3L_8025001 RAL-757 1224 chr3L 8035703 8035737 chr3L 8035913 8035914 13 202 4.5 6.0 5.2 2.1 211 chr3L 8035703 intron nmo + chr3L 8035808 intron nmo + chr3L 8035914 intron nmo + chr3L_13_8035001 chr3L_8035001 RAL-757 1225 chr3L 8043976 8043993 chr3L 8048005 8048022 4 4029 20.0 24.5 22.2 0.2 4046 chr3L 8043976 intron nmo + chr3L 8045999 intron nmo + chr3L 8048022 intron nmo + chr3L_4_8045001 chr3L_8045001 RAL-757 1226 chr3L 8081282 8081305 chr3L 8081385 8081408 18 101 1.0 3.0 2.0 6.0 126 chr3L 8081282 intron Ect4 + chr3L 8081345 intron Ect4 + chr3L 8081408 intron Ect4 + chr3L_18_8080001 chr3L_8080001 RAL-757 1227 chr3L 8158326 8158331 chr3L 8158411 8158416 8 85 0.0 0.0 0.0 8.0 90 chr3L 8158326 intron CG42445 - chr3L 8158371 intron CG42445 - chr3L 8158416 intron CG42445 - chr3L_8_8155001 chr3L_8155001 RAL-757 1228 chr3L 8165969 8165994 chr3L 8166050 8166078 13 80 4.0 5.5 4.8 2.2 109 chr3L 8165969 intergenic CG13675 - chr3L 8166024 intergenic not near genes chr3L 8166078 intergenic not near genes chr3L_13_8165001 chr3L_8165001 RAL-757 1229 chr3L 8178518 8178532 chr3L 8178595 8178609 11 75 2.0 0.0 1.0 5.5 91 chr3L 8178518 intergenic Nmt -,mthl7 - chr3L 8178564 intergenic mthl7 -,Nmt - chr3L 8178609 intergenic mthl7 -,Nmt - chr3L_11_8175001 chr3L_8175001 RAL-757 1230 chr3L 8178883 8178914 chr3L 8179769 8179770 7 881 6.0 0.0 3.0 1.8 887 chr3L 8178883 intron mthl7 - chr3L 8179326 exon mthl7 - chr3L 8179770 intron mthl7 - chr3L_7_8175001 chr3L_8175001 RAL-757 1231 chr3L 8208130 8208157 chr3L 8208262 8208275 9 129 2.0 7.0 4.5 1.6 145 chr3L 8208130 intergenic not near genes chr3L 8208202 intergenic not near genes chr3L 8208275 intergenic not near genes chr3L_9_8205001 chr3L_8205001 RAL-757 1232 chr3L 8216860 8216888 chr3L 8216936 8216962 8 73 5.5 5.0 5.2 1.3 102 chr3L 8216860 intergenic not near genes chr3L 8216911 intergenic not near genes chr3L 8216962 intergenic not near genes chr3L_8_8215001 chr3L_8215001 RAL-757 1233 chr3L 8295791 8295826 chr3L 8295948 8295978 11 154 5.5 5.0 5.2 1.8 187 chr3L 8295791 intergenic CG7201 - chr3L 8295884 intergenic not near genes chr3L 8295978 intergenic not near genes chr3L_11_8295001 chr3L_8295001 RAL-757 1234 chr3L 8619509 8619543 chr3L 8619596 8619630 16 85 5.0 5.5 5.2 2.6 121 chr3L 8619509 intergenic S-Lap1 +,S-Lap2 + chr3L 8619570 intergenic S-Lap1 +,S-Lap2 + chr3L 8619630 intergenic S-Lap1 +,S-Lap2 + chr3L_16_8615001 chr3L_8615001 RAL-757 1235 chr3L 8634912 8634925 chr3L 12063636 12063638 4 3428721 6.0 8.5 7.2 0.5 3428726 chr3L 8634912 intron Zasp66 + chr3L 10349275 intron CR44327 + chr3L 12063638 intron rols - chr3L_4_10345001 chr3L_10345001 RAL-757 1236 chr3L 8643577 8643606 chr3L 8643653 8643677 10 74 3.0 6.5 4.8 1.7 100 chr3L 8643577 3` UTR Cpr66D + chr3L 8643627 intergenic Cpr66D + chr3L 8643677 intergenic Cpr66D + chr3L_10_8640001 chr3L_8640001 RAL-757 1237 chr3L 8791280 8791306 chr3L 8796691 8796694 I-element 10 5412 5.5 0.0 2.8 2.6 5414 chr3L 8791280 exon Fhos + chr3L 8793987 intron Fhos + chr3L 8796694 intron Fhos + chr3L_10_8790001 chr3L_8790001 RAL-757 1238 chr3L 8824578 8824604 chr3L 8824666 8824676 8 84 3.5 5.5 4.5 1.5 98 chr3L 8824578 intergenic not near genes chr3L 8824627 intergenic not near genes chr3L 8824676 intergenic not near genes chr3L_8_8820001 chr3L_8820001 RAL-757 1239 chr3L 8840494 8840520 chr3L 8840582 8840615 6 90 3.5 1.0 2.2 1.9 121 chr3L 8840494 intron dally + chr3L 8840554 intron dally + chr3L 8840615 intron dally + chr3L_6_8840001 chr3L_8840001 RAL-757 1240 chr3L 8849213 8849238 chr3L 8849293 8849313 4 79 4.5 2.0 3.2 1.0 100 chr3L 8849213 intron dally + chr3L 8849263 intron dally + chr3L 8849313 intron dally + chr3L_4_8845001 chr3L_8845001 RAL-757 1241 chr3L 8862781 8862931 chr3L 8862858 8863042 13 90 12.0 5.0 8.5 1.4 261 chr3L 8862781 intron dally + chr3L 8862912 intron dally + chr3L 8863042 intron dally + chr3L_13_8860001 chr3L_8860001 RAL-757 1242 chr3L 8928273 8928280 chr3L 8928348 8928356 9 75 8.0 5.0 6.5 1.2 83 chr3L 8928273 intron Tsp66E + chr3L 8928314 intron Tsp66E + chr3L 8928356 intron Tsp66E + chr3L_9_8925001 chr3L_8925001 RAL-757 1243 chr3L 9003944 9003976 chr3L 9004029 9004060 12 82 6.0 5.0 5.5 1.8 116 chr3L 9003944 intergenic not near genes chr3L 9004002 intergenic not near genes chr3L 9004060 intergenic not near genes chr3L_12_9000001 chr3L_9000001 RAL-757 1244 chr3L 9024502 9024536 chr3L 9024582 9024616 20 76 4.0 4.0 4.0 4.0 114 chr3L 9024502 intergenic not near genes chr3L 9024559 intergenic not near genes chr3L 9024616 intergenic not near genes chr3L_20_9020001 chr3L_9020001 RAL-757 1245 chr3L 9076938 9076960 chr3L 9084491 9084497 412 7 7552 4.5 6.5 5.5 1.1 7559 chr3L 9076938 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084497 exon Tequila + chr3L_7_9080001 chr3L_9080001 RAL-757 1246 chr3L 9113530 9113565 chr3L 9113607 9113623 7 73 5.5 4.0 4.8 1.2 93 chr3L 9113530 intron bol - chr3L 9113576 intron bol - chr3L 9113623 intron bol - chr3L_7_9110001 chr3L_9110001 RAL-757 1247 chr3L 9130569 9130579 chr3L 9134319 9134339 412 6 3756 6.5 3.5 5.0 1.0 3770 chr3L 9130569 intergenic bol - chr3L 9132454 intergenic not near genes chr3L 9134339 intergenic Dhpr + chr3L_6_9130001 chr3L_9130001 RAL-757 1248 chr3L 9164695 9164732 chr3L 9166162 9166190 hobo 20 1465 3.0 5.5 4.2 3.8 1495 chr3L 9164695 intron Rdl - chr3L 9165442 intron Rdl - chr3L 9166190 intron Rdl - chr3L_20_9165001 chr3L_9165001 RAL-757 1249 chr3L 9219245 9219279 chr3L 9219912 9219920 jockey 13 658 6.5 2.0 4.2 2.5 675 chr3L 9219245 intergenic not near genes chr3L 9219582 intergenic not near genes chr3L 9219920 intergenic not near genes chr3L_13_9215001 chr3L_9215001 RAL-757 1250 chr3L 9290054 9290073 chr3L 9290130 9290137 8 74 2.5 0.5 1.5 3.2 83 chr3L 9290054 intergenic not near genes chr3L 9290096 intergenic not near genes chr3L 9290137 intergenic not near genes chr3L_8_9290001 chr3L_9290001 RAL-757 1251 chr3L 9314051 9314063 chr3L 9314129 9314141 4 78 0.0 2.0 1.0 2.0 90 chr3L 9314051 intergenic not near genes chr3L 9314096 intergenic not near genes chr3L 9314141 intergenic not near genes chr3L_4_9310001 chr3L_9310001 RAL-757 1252 chr3L 9359589 9359619 chr3L 9359680 9359710 11 89 6.0 3.0 4.5 2.0 121 chr3L 9359589 3` UTR CG32039 + chr3L 9359650 3` UTR CG32039 + chr3L 9359710 3` UTR CG32039 + chr3L_11_9355001 chr3L_9355001 RAL-757 1253 chr3L 9401345 9401377 chr3L 9401444 9401477 14 96 2.0 6.0 4.0 2.8 132 chr3L 9401345 5` UTR eIF-4E - chr3L 9401411 5` UTR eIF-4E - chr3L 9401477 5` UTR eIF-4E - chr3L_14_9400001 chr3L_9400001 RAL-757 1254 chr3L 9443512 9443539 chr3L 9445303 9445305 S-element 9 1786 9.0 11.0 10.0 0.8 1793 chr3L 9443512 intron CG33926 + chr3L 9444408 intron CG33926 + chr3L 9445305 intron CG33926 + chr3L_9_9440001 chr3L_9440001 RAL-757 1255 chr3L 9501700 9501733 chr3L 9502186 9502219 roo 17 484 3.0 7.5 5.2 2.7 519 chr3L 9501700 intron path - chr3L 9501960 intron path - chr3L 9502219 intron path - chr3L_17_9500001 chr3L_9500001 RAL-757 1256 chr3L 9502623 9502630 chr3L 9502703 9502710 5 79 3.5 7.5 5.5 0.8 87 chr3L 9502623 intron path - chr3L 9502666 intron path - chr3L 9502710 intron path - chr3L_5_9500001 chr3L_9500001 RAL-757 1257 chr3L 9525854 9525861 chr3L 9525924 9525943 4 78 4.0 11.5 7.8 0.5 89 chr3L 9525854 intergenic CG33700 - chr3L 9525898 intergenic CG33700 - chr3L 9525943 intergenic CG33700 - chr3L_4_9525001 chr3L_9525001 RAL-757 1258 chr3L 9575908 9575935 chr3L 9580986 9581013 jockey 5 5074 10.5 5.0 7.8 0.6 5105 chr3L 9575908 intron CG42673 + chr3L 9578460 intron CG42673 + chr3L 9581013 intron CG42673 + chr3L_5_9575001 chr3L_9575001 RAL-757 1259 chr3L 9629751 9629768 chr3L 9629821 9629836 7 73 1.5 7.5 4.5 1.3 85 chr3L 9629751 intron CG8336 + chr3L 9629794 intron CG8336 + chr3L 9629836 intron CG8336 + chr3L_7_9625001 chr3L_9625001 RAL-757 1260 chr3L 9637853 9637887 chr3L 9637935 9637969 18 80 5.5 3.0 4.2 3.5 116 chr3L 9637853 intron fry - chr3L 9637911 intron fry - chr3L 9637969 intron fry - chr3L_18_9635001 chr3L_9635001 RAL-757 1261 chr3L 9639035 9639060 chr3L 9639120 9639145 7 85 0.0 6.5 3.2 1.7 110 chr3L 9639035 intron fry - chr3L 9639090 intron fry - chr3L 9639145 intron fry - chr3L_7_9635001 chr3L_9635001 RAL-757 1262 chr3L 9781695 9781960 chr3L 9781796 9782095 10 130 4.5 1.0 2.8 2.6 400 chr3L 9781695 intron CG8177 + chr3L 9781895 intron CG8177 + chr3L 9782095 intron CG8177 + chr3L_10_9780001 chr3L_9780001 RAL-757 1263 chr3L 9831711 9831724 chr3L 9831789 9831805 9 80 5.0 7.5 6.2 1.2 94 chr3L 9831711 intron CG43897 + chr3L 9831758 intron CG43897 + chr3L 9831805 intron CG43897 + chr3L_9_9830001 chr3L_9830001 RAL-757 1264 chr3L 9918880 9918907 chr3L 9918974 9918994 9 89 5.5 4.0 4.8 1.6 114 chr3L 9918880 intron CG34356 + chr3L 9918937 intron CG34356 + chr3L 9918994 intron CG34356 + chr3L_9_9915001 chr3L_9915001 RAL-757 1265 chr3L 9929672 9929700 chr3L 9938453 9938480 roo 6 8775 2.0 7.0 4.5 1.1 8808 chr3L 9929672 intron CG34356 + chr3L 9934076 intron CG34356 + chr3L 9938480 intron CG34356 + chr3L_6_9930001 chr3L_9930001 RAL-757 1266 chr3L 9992711 9992734 chr3L 9992786 9992808 7 75 1.5 1.5 1.5 2.8 97 chr3L 9992711 intron dpr6 + chr3L 9992760 intron dpr6 + chr3L 9992808 intron dpr6 + chr3L_7_9990001 chr3L_9990001 RAL-757 1267 chr3L 10003154 10003180 chr3L 10003251 10003277 18 96 4.5 4.0 4.2 3.5 123 chr3L 10003154 intron dpr6 + chr3L 10003216 intron dpr6 + chr3L 10003277 intron dpr6 + chr3L_18_10000001 chr3L_10000001 RAL-757 1268 chr3L 10049547 10049575 chr3L 10049627 10049655 11 77 3.0 7.0 5.0 1.8 108 chr3L 10049547 intron dpr6 + chr3L 10049601 intron dpr6 + chr3L 10049655 intron dpr6 + chr3L_11_10045001 chr3L_10045001 RAL-757 1269 chr3L 10107948 10107981 chr3L 10109160 10109182 6 1212 35.0 40.5 37.8 0.2 1234 chr3L 10107948 intron dpr6 + chr3L 10108565 intron dpr6 + chr3L 10109182 intron dpr6 + chr3L_6_10105001 chr3L_10105001 RAL-757 1270 chr3L 10191292 10191313 chr3L 10191401 10191424 18 110 3.5 9.5 6.5 2.4 132 chr3L 10191292 intron ect - chr3L 10191358 intron ect - chr3L 10191424 intron ect - chr3L_18_10190001 chr3L_10190001 RAL-757 1271 chr3L 10214730 10214829 chr3L 10214817 10214930 12 92 0.0 0.0 0.0 12.0 200 chr3L 10214730 intergenic not near genes chr3L 10214830 intergenic not near genes chr3L 10214930 intergenic not near genes chr3L_12_10210001 chr3L_10210001 RAL-757 1272 chr3L 10222740 10222775 chr3L 10222820 10222829 12 76 0.5 3.0 1.8 4.3 89 chr3L 10222740 intron scramb1 - chr3L 10222784 intron scramb1 - chr3L 10222829 intron scramb1 - chr3L_12_10220001 chr3L_10220001 RAL-757 1273 chr3L 10298670 10298696 chr3L 10298757 10298783 19 85 3.5 6.5 5.0 3.2 113 chr3L 10298670 intergenic not near genes chr3L 10298726 intergenic not near genes chr3L 10298783 intergenic not near genes chr3L_19_10295001 chr3L_10295001 RAL-757 1274 chr3L 10300060 10300070 chr3L 10300151 10300162 4 92 4.0 2.5 3.2 1.0 102 chr3L 10300060 intergenic not near genes chr3L 10300111 intergenic not near genes chr3L 10300162 intergenic not near genes chr3L_4_10300001 chr3L_10300001 RAL-757 1275 chr3L 10308754 10308776 chr3L 10308830 10308853 8 77 7.0 5.5 6.2 1.1 99 chr3L 10308754 intergenic not near genes chr3L 10308804 intergenic not near genes chr3L 10308853 intergenic not near genes chr3L_8_10305001 chr3L_10305001 RAL-757 1276 chr3L 10314491 10314505 chr3L 10314560 10314574 10 76 3.5 3.0 3.2 2.4 83 chr3L 10314491 intergenic not near genes chr3L 10314532 intergenic not near genes chr3L 10314574 intergenic not near genes chr3L_10_10310001 chr3L_10310001 RAL-757 1277 chr3L 10328115 10328129 chr3L 10328227 10328240 7 111 7.0 13.5 10.2 0.6 125 chr3L 10328115 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328240 intergenic not near genes chr3L_7_10325001 chr3L_10325001 RAL-757 1278 chr3L 10367512 10367521 chr3L 10367589 10367598 4 77 4.5 6.0 5.2 0.6 86 chr3L 10367512 intergenic CR44327 + chr3L 10367555 intergenic CR44327 + chr3L 10367598 intergenic CR44327 + chr3L_4_10365001 chr3L_10365001 RAL-757 1279 chr3L 10381319 10381343 chr3L 10381398 10381422 11 76 3.0 0.5 1.8 3.9 103 chr3L 10381319 intergenic not near genes chr3L 10381370 intergenic not near genes chr3L 10381422 intergenic not near genes chr3L_11_10380001 chr3L_10380001 RAL-757 1280 chr3L 10414965 10414979 chr3L 10417312 10417340 Doc 11 2359 2.0 4.5 3.2 2.6 2375 chr3L 10414965 intergenic CG12362 + chr3L 10416152 intergenic not near genes chr3L 10417340 intergenic not near genes chr3L_11_10415001 chr3L_10415001 RAL-757 1281 chr3L 10417574 10417604 chr3L 10417651 10417656 12 72 4.5 6.0 5.2 1.9 82 chr3L 10417574 intergenic not near genes chr3L 10417615 intergenic not near genes chr3L 10417656 intergenic not near genes chr3L_12_10415001 chr3L_10415001 RAL-757 1282 chr3L 10456015 10456033 chr3L 10456203 10456226 9 189 4.5 3.5 4.0 1.8 211 chr3L 10456015 intergenic not near genes chr3L 10456120 intergenic not near genes chr3L 10456226 intergenic not near genes chr3L_9_10455001 chr3L_10455001 RAL-757 1283 chr3L 10456742 10456767 chr3L 10456833 10456858 6 90 2.0 2.0 2.0 2.0 116 chr3L 10456742 intergenic not near genes chr3L 10456800 intergenic not near genes chr3L 10456858 intergenic not near genes chr3L_6_10455001 chr3L_10455001 RAL-757 1284 chr3L 10469929 10469965 chr3L 10470005 10470041 16 73 2.5 5.5 4.0 3.2 112 chr3L 10469929 intergenic not near genes chr3L 10469985 intergenic not near genes chr3L 10470041 intergenic not near genes chr3L_16_10465001 chr3L_10465001 RAL-757 1285 chr3L 10534194 10534221 chr3L 10534319 10534341 14 122 2.0 7.0 4.5 2.5 147 chr3L 10534194 intron A2bp1 + chr3L 10534268 intron A2bp1 + chr3L 10534341 intron A2bp1 + chr3L_14_10530001 chr3L_10530001 RAL-757 1286 chr3L 10553111 10553129 chr3L 10553181 10553208 9 76 3.5 2.5 3.0 2.2 97 chr3L 10553111 intron A2bp1 + chr3L 10553160 intron A2bp1 + chr3L 10553208 intron A2bp1 + chr3L_9_10550001 chr3L_10550001 RAL-757 1287 chr3L 10600455 10600469 chr3L 10600537 10600550 7 80 4.0 4.0 4.0 1.4 95 chr3L 10600455 intergenic not near genes chr3L 10600502 intergenic not near genes chr3L 10600550 intergenic not near genes chr3L_7_10600001 chr3L_10600001 RAL-757 1288 chr3L 10614786 10614798 chr3L 10614855 10614877 6 77 0.0 4.5 2.2 1.9 91 chr3L 10614786 intergenic not near genes chr3L 10614832 intergenic not near genes chr3L 10614877 intergenic not near genes chr3L_6_10610001 chr3L_10610001 RAL-757 1289 chr3L 10617281 10617315 chr3L 10617706 10617740 15 423 1.0 3.0 2.0 5.0 459 chr3L 10617281 intergenic not near genes chr3L 10617510 intergenic not near genes chr3L 10617740 intergenic not near genes chr3L_15_10615001 chr3L_10615001 RAL-757 1290 chr3L 10658082 10658212 chr3L 10658159 10658339 23 100 2.0 2.5 2.2 7.2 257 chr3L 10658082 intron CG32066 - chr3L 10658210 intron CG32066 - chr3L 10658339 intron CG32066 - chr3L_23_10655001 chr3L_10655001 RAL-757 1291 chr3L 10694924 10694932 chr3L 10695015 10695018 6 90 5.0 4.0 4.5 1.1 94 chr3L 10694924 intron NijA - chr3L 10694971 intron NijA - chr3L 10695018 intron NijA - chr3L_6_10690001 chr3L_10690001 RAL-757 1292 chr3L 10762841 10762851 chr3L 10762915 10762928 5 78 7.5 2.5 5.0 0.8 87 chr3L 10762841 intergenic not near genes chr3L 10762884 intergenic not near genes chr3L 10762928 intergenic not near genes chr3L_5_10760001 chr3L_10760001 RAL-757 1293 chr3L 10910862 10910883 chr3L 10910954 10910975 10 92 3.5 5.0 4.2 1.9 113 chr3L 10910862 intergenic not near genes chr3L 10910918 intergenic not near genes chr3L 10910975 intergenic not near genes chr3L_10_10910001 chr3L_10910001 RAL-757 1294 chr3L 10956451 10956466 chr3L 10956569 10956584 5 118 3.5 4.5 4.0 1.0 133 chr3L 10956451 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956584 intergenic not near genes chr3L_5_10955001 chr3L_10955001 RAL-757 1295 chr3L 10957014 10957031 chr3L 10957082 10957100 9 72 1.5 0.5 1.0 4.5 86 chr3L 10957014 intergenic not near genes chr3L 10957057 intergenic not near genes chr3L 10957100 intergenic not near genes chr3L_9_10955001 chr3L_10955001 RAL-757 1296 chr3L 10957033 10957034 chr3L 10957080 10957110 4 62 1.5 0.5 1.0 2.0 77 chr3L 10957033 intergenic not near genes chr3L 10957072 intergenic not near genes chr3L 10957110 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-757 1297 chr3L 10958218 10958240 chr3L 10958290 10958316 9 74 1.0 3.5 2.2 2.8 98 chr3L 10958218 intergenic not near genes chr3L 10958267 intergenic not near genes chr3L 10958316 intergenic not near genes chr3L_9_10955001 chr3L_10955001 RAL-757 1298 chr3L 11087060 11087088 chr3L 11088846 11088877 S-element 5 1787 2.5 2.5 2.5 1.4 1817 chr3L 11087060 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088877 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-757 1299 chr3L 11105290 11105325 chr3L 11107001 11107035 X-element 14 1708 4.5 7.0 5.8 2.1 1745 chr3L 11105290 intergenic not near genes chr3L 11106162 intergenic not near genes chr3L 11107035 exon CG32073 - chr3L_14_11105001 chr3L_11105001 RAL-757 1300 chr3L 11112864 11112871 chr3L 11112947 11112947 4 82 6.5 4.0 5.2 0.6 83 chr3L 11112864 intron Sod - chr3L 11112906 intron Sod - chr3L 11112947 intron Sod - chr3L_4_11110001 chr3L_11110001 RAL-757 1301 chr3L 11112874 11112888 chr3L 11112945 11112972 12 76 4.5 4.0 4.2 2.3 98 chr3L 11112874 intron Sod - chr3L 11112923 intron Sod - chr3L 11112972 intron Sod - chr3L_12_11110001 chr3L_11110001 RAL-757 1302 chr3L 11115598 11115630 chr3L 11115675 11115697 18 77 4.5 2.5 3.5 4.0 99 chr3L 11115598 intron fd68A - chr3L 11115648 intron fd68A - chr3L 11115697 intron fd68A - chr3L_18_11115001 chr3L_11115001 RAL-757 1303 chr3L 11135529 11135532 chr3L 11135759 11135762 5 230 1.5 1.0 1.2 2.3 233 chr3L 11135529 intergenic CG14143 + chr3L 11135646 intergenic CG14143 +,CG32082 + chr3L 11135762 intergenic CG14143 +,CG32082 + chr3L_5_11135001 chr3L_11135001 RAL-757 1304 chr3L 11151755 11151780 chr3L 11151832 11151844 10 72 3.0 4.0 3.5 2.2 89 chr3L 11151755 intron CG32082 + chr3L 11151800 intron CG32082 + chr3L 11151844 intron CG32082 + chr3L_10_11150001 chr3L_11150001 RAL-757 1305 chr3L 11224546 11224573 chr3L 11224668 11224690 19 121 4.0 2.0 3.0 4.8 144 chr3L 11224546 intron CG42671 + chr3L 11224618 intron CG42671 + chr3L 11224690 intron CG42671 + chr3L_19_11220001 chr3L_11220001 RAL-757 1306 chr3L 11249863 11249892 chr3L 11249945 11249975 17 80 5.5 5.0 5.2 2.7 112 chr3L 11249863 5` UTR CR44717 + chr3L 11249919 5` UTR CR44717 + chr3L 11249975 5` UTR CR44717 + chr3L_17_11245001 chr3L_11245001 RAL-757 1307 chr3L 11262461 11262469 chr3L 11262596 11262612 4 138 2.5 2.5 2.5 1.1 151 chr3L 11262461 intergenic not near genes chr3L 11262536 intergenic not near genes chr3L 11262612 intergenic not near genes chr3L_4_11260001 chr3L_11260001 RAL-757 1308 chr3L 11264468 11264497 chr3L 11271420 11271449 17.6 8 6950 6.0 3.0 4.5 1.5 6981 chr3L 11264468 intergenic not near genes chr3L 11267958 intergenic not near genes chr3L 11271449 intergenic not near genes chr3L_8_11265001 chr3L_11265001 RAL-757 1309 chr3L 11285216 11285223 chr3L 11285367 11285372 4 150 8.5 0.0 4.2 0.8 156 chr3L 11285216 intergenic CR45404 + chr3L 11285294 intergenic CR45404 + chr3L 11285372 intergenic CR45404 + chr3L_4_11285001 chr3L_11285001 RAL-757 1310 chr3L 11303048 11303053 chr3L 11303134 11303139 4 86 1.0 0.0 0.5 2.7 91 chr3L 11303048 intergenic not near genes chr3L 11303094 intergenic not near genes chr3L 11303139 intergenic not near genes chr3L_4_11300001 chr3L_11300001 RAL-757 1311 chr3L 11329687 11329722 chr3L 11332892 11332915 jockey 5 3196 7.5 3.5 5.5 0.8 3228 chr3L 11329687 intergenic not near genes chr3L 11331301 intergenic not near genes chr3L 11332915 intergenic not near genes chr3L_5_11330001 chr3L_11330001 RAL-757 1312 chr3L 11376544 11376563 chr3L 11378599 11378618 4 2060 26.5 20.5 23.5 0.2 2074 chr3L 11376544 intergenic not near genes chr3L 11377581 intergenic not near genes chr3L 11378618 intergenic not near genes chr3L_4_11375001 chr3L_11375001 RAL-757 1313 chr3L 11428199 11428219 chr3L 11428511 11428511 7 309 0.5 8.5 4.5 1.3 312 chr3L 11428199 intergenic not near genes chr3L 11428355 intergenic not near genes chr3L 11428511 intergenic not near genes chr3L_7_11425001 chr3L_11425001 RAL-757 1314 chr3L 11474621 11474651 chr3L 11474710 11474740 7 86 3.5 3.5 3.5 1.6 119 chr3L 11474621 intergenic Vha16-2 + chr3L 11474680 intergenic Vha16-2 + chr3L 11474740 intergenic Vha16-2 + chr3L_7_11470001 chr3L_11470001 RAL-757 1315 chr3L 11579556 11579585 chr3L 11579662 11579669 19 104 4.0 2.0 3.0 4.8 113 chr3L 11579556 intergenic CG43390 - chr3L 11579612 intergenic CG43390 - chr3L 11579669 intergenic CG43390 - chr3L_19_11575001 chr3L_11575001 RAL-757 1316 chr3L 11588751 11588758 chr3L 11588892 11588904 7 150 3.5 6.5 5.0 1.2 153 chr3L 11588751 intergenic not near genes chr3L 11588828 intergenic not near genes chr3L 11588904 intergenic not near genes chr3L_7_11585001 chr3L_11585001 RAL-757 1317 chr3L 11590268 11590271 chr3L 11590358 11590361 4 90 0.5 2.5 1.5 1.6 93 chr3L 11590268 intergenic CG7377 + chr3L 11590314 intergenic CG7377 + chr3L 11590361 intergenic CG7377 + chr3L_4_11590001 chr3L_11590001 RAL-757 1318 chr3L 11672218 11672222 chr3L 11672301 11672307 5 87 0.0 8.5 4.2 1.0 89 chr3L 11672218 intron CG32085 - chr3L 11672262 intron CG32085 - chr3L 11672307 intron CG32085 - chr3L_5_11670001 chr3L_11670001 RAL-757 1319 chr3L 11678096 11678123 chr3L 11678183 11678210 8 86 5.5 6.5 6.0 1.1 114 chr3L 11678096 intron CG32085 - chr3L 11678153 intron CG32085 - chr3L 11678210 intron CG32085 - chr3L_8_11675001 chr3L_11675001 RAL-757 1320 chr3L 11702380 11702399 chr3L 11702777 11702796 7 395 7.5 6.0 6.8 0.9 416 chr3L 11702380 intron CG11658 - chr3L 11702588 intron CG11658 - chr3L 11702796 intron CG11658 - chr3L_7_11700001 chr3L_11700001 RAL-757 1321 chr3L 11723080 11723115 chr3L 11727875 11727910 Doc 20 4795 3.5 6.5 5.0 3.3 4830 chr3L 11723080 3` UTR Bmcp + chr3L 11725495 intron Bmcp + chr3L 11727910 3` UTR Bmcp + chr3L_20_11725001 chr3L_11725001 RAL-757 1322 chr3L 11740132 11740151 chr3L 11740228 11740249 5 97 9.0 3.5 6.2 0.7 117 chr3L 11740132 intron CG6024 - chr3L 11740190 intron CG6024 - chr3L 11740249 intron CG6024 - chr3L_5_11740001 chr3L_11740001 RAL-757 1323 chr3L 11744014 11744027 chr3L 11744122 11744132 7 108 8.0 1.0 4.5 1.3 118 chr3L 11744014 exon CG6024 - chr3L 11744073 intron CG6024 - chr3L 11744132 intron CG6024 - chr3L_7_11740001 chr3L_11740001 RAL-757 1324 chr3L 11744030 11744044 chr3L 11744120 11744137 8 99 6.0 1.0 3.5 1.8 107 chr3L 11744030 intron CG6024 - chr3L 11744084 intron CG6024 - chr3L 11744137 intron CG6024 - chr3L_8_11740001 chr3L_11740001 RAL-757 1325 chr3L 11757916 11757935 chr3L 11758013 11758027 9 95 8.0 0.0 4.0 1.8 111 chr3L 11757916 intron CG6024 - chr3L 11757972 intron CG6024 - chr3L 11758027 intron CG6024 - chr3L_9_11755001 chr3L_11755001 RAL-757 1326 chr3L 7749470 7749471 chr3L 11777678 11777678 5 4028207 15.0 12.5 13.8 0.3 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_9760001 chr3L_9760001 RAL-757 1327 chr3L 11777678 11777678 chr3L 12163304 12163305 4 385627 12.5 12.0 12.2 0.3 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_4_11970001 chr3L_11970001 RAL-757 1328 chr3L 11816795 11816817 chr3L 11816895 11816913 13 96 5.5 12.0 8.8 1.3 118 chr3L 11816795 3` UTR CG5946 - chr3L 11816854 3` UTR CG5946 - chr3L 11816913 3` UTR CG5946 - chr3L_13_11815001 chr3L_11815001 RAL-757 1329 chr3L 11833732 11833745 chr3L 11833836 11833849 5 104 2.0 11.5 6.8 0.6 117 chr3L 11833732 intergenic CycA - chr3L 11833790 intergenic CycA - chr3L 11833849 intergenic CycA - chr3L_5_11830001 chr3L_11830001 RAL-757 1330 chr3L 11849332 11849356 chr3L 11849432 11849456 13 100 3.0 7.0 5.0 2.2 124 chr3L 11849332 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849456 intergenic not near genes chr3L_13_11845001 chr3L_11845001 RAL-757 1331 chr3L 11850144 11850169 chr3L 11850234 11850261 9 89 3.0 4.0 3.5 2.0 117 chr3L 11850144 intergenic not near genes chr3L 11850202 intergenic CG44837 - chr3L 11850261 intergenic CG44837 - chr3L_9_11850001 chr3L_11850001 RAL-757 1332 chr3L 11864552 11864581 chr3L 11865847 11865876 pogo 10 1288 6.0 7.0 6.5 1.3 1324 chr3L 11864552 intron CG44837 - chr3L 11865214 intron CG44837 - chr3L 11865876 intron CG44837 - chr3L_10_11865001 chr3L_11865001 RAL-757 1333 chr3L 11887260 11887289 chr3L 11887356 11887356 7 92 0.0 0.0 0.0 7.0 96 chr3L 11887260 intron,3` UTR CG44837 -,CG5897 - chr3L 11887308 intron,3` UTR CG44837 -,CG5897 - chr3L 11887356 intron,3` UTR CG44837 -,CG5897 - chr3L_7_11885001 chr3L_11885001 RAL-757 1334 chr3L 11905122 11905142 chr3L 11905204 11905224 11 81 4.0 5.5 4.8 1.9 102 chr3L 11905122 intron CG44837 - chr3L 11905173 intron CG44837 - chr3L 11905224 intron CG44837 - chr3L_11_11905001 chr3L_11905001 RAL-757 1335 chr3L 11938879 11938899 chr3L 11938961 11938988 7 83 5.0 5.0 5.0 1.2 109 chr3L 11938879 intergenic CG44837 - chr3L 11938934 intergenic CG44837 - chr3L 11938988 intergenic CG44837 - chr3L_7_11935001 chr3L_11935001 RAL-757 1336 chr3L 11943494 11943518 chr3L 11943595 11943619 7 99 6.0 7.0 6.5 0.9 125 chr3L 11943494 intergenic Rpt4R +,CG5883 - chr3L 11943556 intergenic Rpt4R +,CG5883 - chr3L 11943619 intergenic CG5883 -,Rpt4R + chr3L_7_11940001 chr3L_11940001 RAL-757 1337 chr3L 11984570 11984583 chr3L 11984661 11984670 4 90 9.0 1.0 5.0 0.7 100 chr3L 11984570 intergenic CG6938 + chr3L 11984620 intergenic CG6938 + chr3L 11984670 intergenic CG6938 + chr3L_4_11980001 chr3L_11980001 RAL-757 1338 chr3L 12013915 12013934 chr3L 12014005 12014014 11 87 4.5 4.5 4.5 2.0 99 chr3L 12013915 intron rols - chr3L 12013964 intron rols - chr3L 12014014 intron rols - chr3L_11_12010001 chr3L_12010001 RAL-757 1339 chr3L 12034889 12034920 chr3L 12034966 12034997 14 76 3.0 2.5 2.8 3.7 108 chr3L 12034889 intron rols - chr3L 12034943 intron rols - chr3L 12034997 intron rols - chr3L_14_12030001 chr3L_12030001 RAL-757 1340 chr3L 12083920 12083954 chr3L 12084115 12084138 8 192 35.5 3.0 19.2 0.4 218 chr3L 12083920 intergenic not near genes chr3L 12084029 intergenic not near genes chr3L 12084138 intergenic not near genes chr3L_8_12080001 chr3L_12080001 RAL-757 1341 chr3L 12092396 12092406 chr3L 12092473 12092483 8 77 1.0 6.0 3.5 1.8 87 chr3L 12092396 intergenic not near genes chr3L 12092440 intergenic not near genes chr3L 12092483 intergenic not near genes chr3L_8_12090001 chr3L_12090001 RAL-757 1342 chr3L 12119760 12119787 chr3L 12119857 12119878 12 92 5.0 7.0 6.0 1.7 118 chr3L 12119760 3` UTR ssp + chr3L 12119819 intergenic ssp +,CG11560 + chr3L 12119878 intergenic ssp +,CG11560 + chr3L_12_12115001 chr3L_12115001 RAL-757 1343 chr3L 12170792 12170824 chr3L 12170874 12170906 7 77 2.0 7.0 4.5 1.3 114 chr3L 12170792 intron Rh7 - chr3L 12170849 intron Rh7 - chr3L 12170906 intron Rh7 - chr3L_7_12170001 chr3L_12170001 RAL-757 1344 chr3L 12304092 12304118 chr3L 12304167 12304190 7 73 4.0 10.0 7.0 0.9 98 chr3L 12304092 intergenic not near genes chr3L 12304141 intergenic not near genes chr3L 12304190 intergenic not near genes chr3L_7_12300001 chr3L_12300001 RAL-757 1345 chr3L 12319894 12319919 chr3L 12320166 12320181 8 269 2.5 2.5 2.5 2.3 287 chr3L 12319894 intergenic not near genes chr3L 12320038 intergenic not near genes chr3L 12320181 intergenic not near genes chr3L_8_12320001 chr3L_12320001 RAL-757 1346 chr3L 12335387 12335417 chr3L 12335465 12335476 5 69 3.0 2.5 2.8 1.3 89 chr3L 12335387 exon CG32105 + chr3L 12335432 3` UTR CG32105 + chr3L 12335476 3` UTR CG32105 + chr3L_5_12335001 chr3L_12335001 RAL-757 1347 chr3L 12353933 12353948 chr3L 12354010 12354026 7 84 0.0 2.0 1.0 3.5 93 chr3L 12353933 intergenic not near genes chr3L 12353980 intergenic not near genes chr3L 12354026 intergenic not near genes chr3L_7_12350001 chr3L_12350001 RAL-757 1348 chr3L 12369535 12369552 chr3L 12369625 12369635 6 89 10.5 6.0 8.2 0.7 100 chr3L 12369535 intron Ncc69 - chr3L 12369585 intron Ncc69 - chr3L 12369635 intron Ncc69 - chr3L_6_12365001 chr3L_12365001 RAL-757 1349 chr3L 12369554 12369569 chr3L 12369624 12369659 8 87 5.0 6.0 5.5 1.2 105 chr3L 12369554 intron Ncc69 - chr3L 12369606 intron Ncc69 - chr3L 12369659 intron Ncc69 - chr3L_8_12365001 chr3L_12365001 RAL-757 1350 chr3L 12458484 12458487 chr3L 12458582 12458585 4 98 11.0 3.5 7.2 0.5 101 chr3L 12458484 intergenic not near genes chr3L 12458534 intergenic not near genes chr3L 12458585 intergenic not near genes chr3L_4_12455001 chr3L_12455001 RAL-757 1351 chr3L 12458492 12458501 chr3L 12458579 12458599 4 92 7.0 3.0 5.0 0.7 107 chr3L 12458492 intergenic not near genes chr3L 12458546 intergenic not near genes chr3L 12458599 intergenic not near genes chr3L_4_12455001 chr3L_12455001 RAL-757 1352 chr3L 12467252 12467284 chr3L 12467337 12467364 11 80 0.5 5.0 2.8 2.9 112 chr3L 12467252 intron eyg - chr3L 12467308 intron eyg - chr3L 12467364 intron eyg - chr3L_11_12465001 chr3L_12465001 RAL-757 1353 chr3L 12491704 12491711 chr3L 12491787 12491794 4 83 0.5 3.0 1.8 1.4 90 chr3L 12491704 intergenic CG10657 -,CR45682 + chr3L 12491749 intergenic CG10657 -,CR45682 + chr3L 12491794 intergenic CG10657 -,CR45682 + chr3L_4_12490001 chr3L_12490001 RAL-757 1354 chr3L 12504111 12504141 chr3L 12504195 12504212 10 79 0.0 4.5 2.2 3.1 101 chr3L 12504111 intergenic vih +,CG10646 - chr3L 12504162 intergenic vih +,CG10646 - chr3L 12504212 intergenic vih +,CG10646 - chr3L_10_12500001 chr3L_12500001 RAL-757 1355 chr3L 12578049 12578067 chr3L 12578137 12578155 5 88 2.5 3.0 2.8 1.3 106 chr3L 12578049 intergenic not near genes chr3L 12578102 intergenic not near genes chr3L 12578155 intergenic not near genes chr3L_5_12575001 chr3L_12575001 RAL-757 1356 chr3L 12626152 12626166 chr3L 12626261 12626275 10 109 1.0 3.0 2.0 3.3 123 chr3L 12626152 intergenic not near genes chr3L 12626214 intergenic not near genes chr3L 12626275 intergenic not near genes chr3L_10_12625001 chr3L_12625001 RAL-757 1357 chr3L 12647962 12647978 chr3L 12648033 12648054 7 75 1.5 3.0 2.2 2.2 92 chr3L 12647962 5` UTR CR32111 + chr3L 12648008 5` UTR CR32111 + chr3L 12648054 5` UTR CR32111 + chr3L_7_12645001 chr3L_12645001 RAL-757 1358 chr3L 12857997 12858005 chr3L 12858092 12858095 4 94 5.0 5.5 5.2 0.6 98 chr3L 12857997 3` UTR CG32107 - chr3L 12858046 3` UTR CG32107 - chr3L 12858095 3` UTR CG32107 - chr3L_4_12855001 chr3L_12855001 RAL-757 1359 chr3L 12874925 12874962 chr3L 12877217 12877251 jockey 21 2290 3.5 5.0 4.2 4.0 2326 chr3L 12874925 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877251 intergenic not near genes chr3L_21_12875001 chr3L_12875001 RAL-757 1360 chr3L 12894802 12894820 chr3L 12894878 12894882 6 72 14.5 6.0 10.2 0.5 80 chr3L 12894802 intergenic CG14118 + chr3L 12894842 intergenic CG14118 + chr3L 12894882 intergenic CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-757 1361 chr3L 12919286 12919308 chr3L 12924760 12924772 Rt1c 7 5474 4.5 4.0 4.2 1.3 5486 chr3L 12919286 intergenic not near genes chr3L 12922029 intergenic not near genes chr3L 12924772 intergenic not near genes chr3L_7_12920001 chr3L_12920001 RAL-757 1362 chr3L 12955139 12955163 chr3L 12955208 12955235 14 71 5.5 4.0 4.8 2.4 96 chr3L 12955139 intergenic CG10752 - chr3L 12955187 intergenic not near genes chr3L 12955235 intergenic not near genes chr3L_14_12955001 chr3L_12955001 RAL-757 1363 chr3L 12957797 12957805 chr3L 12962272 12962287 copia 5 4478 7.5 8.5 8.0 0.6 4490 chr3L 12957797 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962287 intergenic not near genes chr3L_5_12960001 chr3L_12960001 RAL-757 1364 chr3L 12979912 12979925 chr3L 12979980 12979995 4 69 7.5 7.0 7.2 0.5 83 chr3L 12979912 intergenic not near genes chr3L 12979954 intergenic not near genes chr3L 12979995 intergenic not near genes chr3L_4_12975001 chr3L_12975001 RAL-757 1365 chr3L 13008816 13008826 chr3L 13008952 13008978 8 149 2.5 4.0 3.2 1.9 162 chr3L 13008816 exon CG14117 + chr3L 13008897 intron CG14117 + chr3L 13008978 exon CG14117 + chr3L_8_13005001 chr3L_13005001 RAL-757 1366 chr3L 13026562 13026576 chr3L 13026653 13026667 5 91 4.5 11.0 7.8 0.6 105 chr3L 13026562 intergenic Zmynd10 - chr3L 13026614 intergenic Zmynd10 - chr3L 13026667 intergenic Zmynd10 - chr3L_5_13025001 chr3L_13025001 RAL-757 1367 chr3L 13051276 13051290 chr3L 13051396 13051415 7 125 3.5 4.5 4.0 1.4 139 chr3L 13051276 intergenic not near genes chr3L 13051346 intergenic not near genes chr3L 13051415 intergenic not near genes chr3L_7_13050001 chr3L_13050001 RAL-757 1368 chr3L 13069561 13069589 chr3L 13069640 13069668 19 77 4.5 6.5 5.5 2.9 107 chr3L 13069561 intergenic not near genes chr3L 13069614 intergenic not near genes chr3L 13069668 intergenic not near genes chr3L_19_13065001 chr3L_13065001 RAL-757 1369 chr3L 13144115 13144143 chr3L 13144192 13144209 11 74 5.0 3.5 4.2 2.1 94 chr3L 13144115 intergenic not near genes chr3L 13144162 intergenic not near genes chr3L 13144209 intergenic not near genes chr3L_11_13140001 chr3L_13140001 RAL-757 1370 chr3L 13148665 13148696 chr3L 13148741 13148772 12 72 2.5 4.0 3.2 2.9 107 chr3L 13148665 intergenic not near genes chr3L 13148718 intergenic not near genes chr3L 13148772 intergenic not near genes chr3L_12_13145001 chr3L_13145001 RAL-757 1371 chr3L 13169968 13169997 chr3L 13170051 13170081 10 84 6.0 3.0 4.5 1.8 113 chr3L 13169968 intergenic not near genes chr3L 13170024 intergenic not near genes chr3L 13170081 intergenic not near genes chr3L_10_13170001 chr3L_13170001 RAL-757 1372 chr3L 13197110 13197115 chr3L 13197227 13197232 4 117 0.0 10.5 5.2 0.6 122 chr3L 13197110 intergenic not near genes chr3L 13197171 intergenic not near genes chr3L 13197232 intergenic not near genes chr3L_4_13195001 chr3L_13195001 RAL-757 1373 chr3L 13205239 13205275 chr3L 13205325 13205325 23 83 4.0 11.0 7.5 2.7 86 chr3L 13205239 intergenic not near genes chr3L 13205282 intergenic not near genes chr3L 13205325 intergenic not near genes chr3L_23_13205001 chr3L_13205001 RAL-757 1374 chr3L 13267288 13267307 chr3L 13267401 13267415 8 110 7.5 3.5 5.5 1.2 127 chr3L 13267288 intron caps + chr3L 13267352 intron caps + chr3L 13267415 intron caps + chr3L_8_13265001 chr3L_13265001 RAL-757 1375 chr3L 13314606 13314609 chr3L 13314685 13314691 5 81 6.0 2.0 4.0 1.0 85 chr3L 13314606 intergenic not near genes chr3L 13314648 intergenic not near genes chr3L 13314691 intergenic not near genes chr3L_5_13310001 chr3L_13310001 RAL-757 1376 chr3L 13365046 13365070 chr3L 13365124 13365148 7 78 3.5 0.0 1.8 2.5 102 chr3L 13365046 intergenic not near genes chr3L 13365097 intergenic not near genes chr3L 13365148 intergenic not near genes chr3L_7_13365001 chr3L_13365001 RAL-757 1377 chr3L 13374246 13374253 chr3L 13374335 13374342 4 88 6.5 7.0 6.8 0.5 96 chr3L 13374246 intergenic not near genes chr3L 13374294 intergenic not near genes chr3L 13374342 intergenic not near genes chr3L_4_13370001 chr3L_13370001 RAL-757 1378 chr3L 13374255 13374499 chr3L 13374333 13374600 25 95 4.5 7.0 5.8 3.7 345 chr3L 13374255 intergenic not near genes chr3L 13374428 intergenic not near genes chr3L 13374600 intergenic not near genes chr3L_25_13370001 chr3L_13370001 RAL-757 1379 chr3L 13458467 13458499 chr3L 13458804 13458810 11 329 2.5 7.5 5.0 1.8 343 chr3L 13458467 intron CG10738 + chr3L 13458638 intron CG10738 + chr3L 13458810 intron CG10738 + chr3L_11_13455001 chr3L_13455001 RAL-757 1380 chr3L 13477018 13477032 chr3L 13477095 13477109 5 77 0.0 6.5 3.2 1.2 91 chr3L 13477018 intergenic not near genes chr3L 13477064 intergenic stv + chr3L 13477109 intergenic stv + chr3L_5_13475001 chr3L_13475001 RAL-757 1381 chr3L 13525155 13525186 chr3L 13532951 13532982 roo 12 7792 14.0 11.0 12.5 0.9 7827 chr3L 13525155 intergenic not near genes chr3L 13529068 intergenic not near genes chr3L 13532982 intergenic not near genes chr3L_12_13525001 chr3L_13525001 RAL-757 1382 chr3L 13629529 13629549 chr3L 13629639 13629660 8 108 4.0 9.5 6.8 1.0 131 chr3L 13629529 intron bru-3 - chr3L 13629594 intron bru-3 - chr3L 13629660 intron bru-3 - chr3L_8_13625001 chr3L_13625001 RAL-757 1383 chr3L 13674339 13674343 chr3L 13674550 13674574 4 219 4.0 1.0 2.5 1.1 235 chr3L 13674339 intron bru-3 - chr3L 13674456 intron bru-3 - chr3L 13674574 intron bru-3 - chr3L_4_13670001 chr3L_13670001 RAL-757 1384 chr3L 13703647 13703674 chr3L 13703724 13703751 9 66 2.5 2.0 2.2 2.8 104 chr3L 13703647 intron bru-3 - chr3L 13703699 intron bru-3 - chr3L 13703751 intron bru-3 - chr3L_9_13700001 chr3L_13700001 RAL-757 1385 chr3L 13711980 13711987 chr3L 13712070 13712075 4 89 5.0 4.5 4.8 0.7 95 chr3L 13711980 intron bru-3 - chr3L 13712028 intron bru-3 - chr3L 13712075 intron bru-3 - chr3L_4_13710001 chr3L_13710001 RAL-757 1386 chr3L 13776133 13776156 chr3L 13776224 13776249 6 86 2.5 4.5 3.5 1.3 116 chr3L 13776133 intron bru-3 - chr3L 13776191 intron bru-3 - chr3L 13776249 intron bru-3 - chr3L_6_13775001 chr3L_13775001 RAL-757 1387 chr3L 13804549 13804578 chr3L 13822830 13822843 roo 8 18277 5.5 3.5 4.5 1.5 18294 chr3L 13804549 intergenic not near genes chr3L 13813696 intergenic not near genes chr3L 13822843 intergenic not near genes chr3L_8_13810001 chr3L_13810001 RAL-757 1388 chr3L 13893742 13893773 chr3L 13893826 13893857 11 77 7.5 3.5 5.5 1.7 115 chr3L 13893742 intron dysc - chr3L 13893800 intron dysc - chr3L 13893857 intron dysc - chr3L_11_13890001 chr3L_13890001 RAL-757 1389 chr3L 13901574 13901601 chr3L 13901651 13901663 16 73 3.0 2.5 2.8 4.2 89 chr3L 13901574 intron dysc - chr3L 13901618 intron dysc - chr3L 13901663 intron dysc - chr3L_16_13900001 chr3L_13900001 RAL-757 1390 chr3L 13920419 13920434 chr3L 13920499 13920514 8 77 2.0 6.5 4.2 1.5 95 chr3L 13920419 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920514 intron Rgl - chr3L_8_13920001 chr3L_13920001 RAL-757 1391 chr3L 13990901 13990926 chr3L 13990975 13991002 13 72 9.0 4.5 6.8 1.7 101 chr3L 13990901 intron CG17364 - chr3L 13990952 intron CG17364 - chr3L 13991002 intron CG17364 - chr3L_13_13990001 chr3L_13990001 RAL-757 1392 chr3L 14076073 14076105 chr3L 14076152 14076183 25 78 2.5 6.5 4.5 4.5 110 chr3L 14076073 3` UTR,intron Pex1 +,btl + chr3L 14076128 intron btl + chr3L 14076183 intron btl + chr3L_25_14075001 chr3L_14075001 RAL-757 1393 chr3L 14092744 14092756 chr3L 14092827 14092837 6 82 2.5 1.0 1.8 2.1 93 chr3L 14092744 intergenic not near genes chr3L 14092790 intergenic not near genes chr3L 14092837 intergenic not near genes chr3L_6_14090001 chr3L_14090001 RAL-757 1394 chr3L 14175354 14175382 chr3L 14175502 14175530 13 143 2.0 2.0 2.0 4.3 176 chr3L 14175354 intergenic D - chr3L 14175442 intergenic D - chr3L 14175530 intergenic D - chr3L_13_14175001 chr3L_14175001 RAL-757 1395 chr3L 14194724 14194741 chr3L 14194800 14194817 5 75 6.0 7.0 6.5 0.7 93 chr3L 14194724 intron nuf + chr3L 14194770 intron nuf + chr3L 14194817 intron nuf + chr3L_5_14190001 chr3L_14190001 RAL-757 1396 chr3L 14214860 14214864 chr3L 14214945 14214949 4 84 0.0 10.0 5.0 0.7 89 chr3L 14214860 intron nuf + chr3L 14214904 intron nuf + chr3L 14214949 intron nuf + chr3L_4_14210001 chr3L_14210001 RAL-757 1397 chr3L 14239988 14240007 chr3L 14240085 14240103 4 92 0.5 4.0 2.2 1.2 115 chr3L 14239988 intergenic not near genes chr3L 14240046 intergenic not near genes chr3L 14240103 intergenic not near genes chr3L_4_14240001 chr3L_14240001 RAL-757 1398 chr3L 14245574 14245593 chr3L 14245663 14245682 1360 10 89 2.0 3.5 2.8 2.6 108 chr3L 14245574 3` UTR CR44561 - chr3L 14245628 3` UTR CR44561 - chr3L 14245682 3` UTR CR44561 - chr3L_10_14245001 chr3L_14245001 RAL-757 1399 chr3L 14295984 14296014 chr3L 14296470 14296495 roo 13 480 3.0 6.0 4.5 2.4 511 chr3L 14295984 intron fz + chr3L 14296240 intron fz + chr3L 14296495 intron fz + chr3L_13_14295001 chr3L_14295001 RAL-757 1400 chr3L 14312047 14312056 chr3L 14316841 14316856 X-element 4 4802 2.0 4.5 3.2 1.0 4809 chr3L 14312047 exon fz + chr3L 14314452 intron fz + chr3L 14316856 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-757 1401 chr3L 14331477 14331490 chr3L 14331545 14331558 7 74 2.0 3.0 2.5 2.0 81 chr3L 14331477 intron fz + chr3L 14331518 intron fz + chr3L 14331558 intron fz + chr3L_7_14330001 chr3L_14330001 RAL-757 1402 chr3L 14338297 14338330 chr3L 14338393 14338426 11 90 2.0 3.0 2.5 3.1 129 chr3L 14338297 intron fz + chr3L 14338362 intron fz + chr3L 14338426 intron fz + chr3L_11_14335001 chr3L_14335001 RAL-757 1403 chr3L 14341413 14341431 chr3L 14341548 14341551 4 128 0.5 0.0 0.2 3.3 138 chr3L 14341413 intron fz + chr3L 14341482 intron fz + chr3L 14341551 intron fz + chr3L_4_14340001 chr3L_14340001 RAL-757 1404 chr3L 14356518 14356551 chr3L 14356598 14356631 18 78 5.0 4.5 4.8 3.1 113 chr3L 14356518 intron fz + chr3L 14356574 intron fz + chr3L 14356631 intron fz + chr3L_18_14355001 chr3L_14355001 RAL-757 1405 chr3L 14358692 14358703 chr3L 14358771 14358782 8 78 7.0 2.5 4.8 1.4 90 chr3L 14358692 intron fz + chr3L 14358737 intron fz + chr3L 14358782 intron fz + chr3L_8_14355001 chr3L_14355001 RAL-757 1406 chr3L 14359549 14359586 chr3L 14359629 14359666 12 73 3.5 4.0 3.8 2.5 117 chr3L 14359549 intron fz + chr3L 14359608 intron fz + chr3L 14359666 intron fz + chr3L_12_14355001 chr3L_14355001 RAL-757 1407 chr3L 14399184 14399205 chr3L 14399265 14399274 10 83 4.0 0.0 2.0 3.3 90 chr3L 14399184 intergenic not near genes chr3L 14399229 intergenic not near genes chr3L 14399274 intergenic not near genes chr3L_10_14395001 chr3L_14395001 RAL-757 1408 chr3L 14444723 14444739 chr3L 14444898 14444914 4 175 6.0 7.5 6.8 0.5 191 chr3L 14444723 intron bbg - chr3L 14444818 intron bbg - chr3L 14444914 intron bbg - chr3L_4_14440001 chr3L_14440001 RAL-757 1409 chr3L 14468449 14468475 chr3L 14473648 14473681 copia 16 5204 4.0 5.5 4.8 2.8 5232 chr3L 14468449 intron bbg - chr3L 14471065 intron bbg - chr3L 14473681 intron bbg - chr3L_16_14470001 chr3L_14470001 RAL-757 1410 chr3L 14486020 14486047 chr3L 14486101 14486128 7 77 4.5 6.5 5.5 1.1 108 chr3L 14486020 intron bbg - chr3L 14486074 intron bbg - chr3L 14486128 intron bbg - chr3L_7_14485001 chr3L_14485001 RAL-757 1411 chr3L 14531220 14531238 chr3L 14531333 14531351 10 112 6.0 5.5 5.8 1.5 131 chr3L 14531220 intron bbg - chr3L 14531286 intron bbg - chr3L 14531351 intron bbg - chr3L_10_14530001 chr3L_14530001 RAL-757 1412 chr3L 14541724 14541737 chr3L 14541814 14541814 6 86 5.0 5.5 5.2 1.0 90 chr3L 14541724 3` UTR CG9238 - chr3L 14541769 3` UTR CG9238 - chr3L 14541814 3` UTR CG9238 - chr3L_6_14540001 chr3L_14540001 RAL-757 1413 chr3L 14635710 14635734 chr3L 14635788 14635793 5 71 5.5 4.0 4.8 0.9 83 chr3L 14635710 intron dlp + chr3L 14635752 intron dlp + chr3L 14635793 intron dlp + chr3L_5_14635001 chr3L_14635001 RAL-757 1414 chr3L 14914077 14914106 chr3L 14914223 14914252 14 145 3.0 6.5 4.8 2.4 175 chr3L 14914077 intron DCX-EMAP + chr3L 14914164 intron DCX-EMAP + chr3L 14914252 intron DCX-EMAP + chr3L_14_14910001 chr3L_14910001 RAL-757 1415 chr3L 14948413 14948432 chr3L 14948506 14948526 5 90 7.5 0.5 4.0 1.0 113 chr3L 14948413 intergenic not near genes chr3L 14948470 intergenic not near genes chr3L 14948526 intergenic not near genes chr3L_5_14945001 chr3L_14945001 RAL-757 1416 chr3L 14954375 14954389 chr3L 14956039 14956058 transib2 5 1667 7.5 5.5 6.5 0.7 1683 chr3L 14954375 intergenic not near genes chr3L 14955216 intergenic not near genes chr3L 14956058 intergenic not near genes chr3L_5_14955001 chr3L_14955001 RAL-757 1417 chr3L 15037420 15037450 chr3L 15037506 15037533 11 85 7.0 0.0 3.5 2.4 113 chr3L 15037420 intron Sytbeta - chr3L 15037476 intron Sytbeta - chr3L 15037533 intron Sytbeta - chr3L_11_15035001 chr3L_15035001 RAL-757 1418 chr3L 15062168 15062204 chr3L 15062262 15062275 12 90 4.5 14.5 9.5 1.1 107 chr3L 15062168 intron Sytbeta - chr3L 15062222 intron,3` UTR Sytbeta -,CR43684 - chr3L 15062275 intron,3` UTR Sytbeta -,CR43684 - chr3L_12_15060001 chr3L_15060001 RAL-757 1419 chr3L 15177346 15177379 chr3L 15177431 15177454 15 80 3.5 4.0 3.8 3.1 108 chr3L 15177346 intergenic not near genes chr3L 15177400 intergenic not near genes chr3L 15177454 intergenic not near genes chr3L_15_15175001 chr3L_15175001 RAL-757 1420 chr3L 15193695 15193725 chr3L 15193864 15193894 7 166 3.0 4.5 3.8 1.5 199 chr3L 15193695 intergenic not near genes chr3L 15193794 intergenic not near genes chr3L 15193894 intergenic not near genes chr3L_7_15190001 chr3L_15190001 RAL-757 1421 chr3L 15233549 15233585 chr3L 15233630 15233666 14 79 4.5 6.5 5.5 2.2 117 chr3L 15233549 intergenic not near genes chr3L 15233608 intergenic not near genes chr3L 15233666 intergenic not near genes chr3L_14_15230001 chr3L_15230001 RAL-757 1422 chr3L 15257433 15257449 chr3L 15257644 15257662 5 213 4.0 3.5 3.8 1.0 229 chr3L 15257433 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257662 intergenic not near genes chr3L_5_15255001 chr3L_15255001 RAL-757 1423 chr3L 15295771 15295799 chr3L 15298614 15298642 gypsy5 9 2838 8.0 8.0 8.0 1.0 2871 chr3L 15295771 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298642 intergenic Best4 + chr3L_9_15295001 chr3L_15295001 RAL-757 1424 chr3L 15333141 15333170 chr3L 15333221 15333252 7 79 3.0 4.5 3.8 1.5 111 chr3L 15333141 intergenic CR43247 + chr3L 15333196 intergenic CR43247 + chr3L 15333252 intergenic CR43247 + chr3L_7_15330001 chr3L_15330001 RAL-757 1425 chr3L 15384957 15384990 chr3L 15385085 15385118 22 123 3.0 2.0 2.5 6.3 161 chr3L 15384957 intergenic not near genes chr3L 15385038 intergenic not near genes chr3L 15385118 intergenic not near genes chr3L_22_15385001 chr3L_15385001 RAL-757 1426 chr3L 15423764 15423783 chr3L 15426604 15426627 opus 7 2839 11.0 5.0 8.0 0.8 2863 chr3L 15423764 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426627 intergenic not near genes chr3L_7_15425001 chr3L_15425001 RAL-757 1427 chr3L 15444671 15444680 chr3L 15444748 15444749 4 83 7.5 4.0 5.8 0.6 78 chr3L 15444671 intergenic not near genes chr3L 15444710 intergenic not near genes chr3L 15444749 intergenic not near genes chr3L_4_15440001 chr3L_15440001 RAL-757 1428 chr3L 15466037 15466128 chr3L 15466119 15466224 7 90 0.0 0.0 0.0 7.0 187 chr3L 15466037 intergenic not near genes chr3L 15466130 intergenic not near genes chr3L 15466224 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-757 1429 chr3L 15511977 15512004 chr3L 15512055 15512076 12 75 7.5 3.5 5.5 1.8 99 chr3L 15511977 intron Eip71CD + chr3L 15512026 intron Eip71CD + chr3L 15512076 intron Eip71CD + chr3L_12_15510001 chr3L_15510001 RAL-757 1430 chr3L 15536619 15536652 chr3L 15536694 15536733 18 76 9.0 8.0 8.5 1.9 114 chr3L 15536619 intron CrebA + chr3L 15536676 intron CrebA + chr3L 15536733 intron CrebA + chr3L_18_15535001 chr3L_15535001 RAL-757 1431 chr3L 15541616 15541652 chr3L 15541707 15541743 13 91 4.5 5.5 5.0 2.2 127 chr3L 15541616 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541743 intron CrebA + chr3L_13_15540001 chr3L_15540001 RAL-757 1432 chr3L 15541964 15541984 chr3L 15542058 15542078 12 93 3.0 8.0 5.5 1.8 114 chr3L 15541964 intron CrebA + chr3L 15542021 intron CrebA + chr3L 15542078 intron CrebA + chr3L_12_15540001 chr3L_15540001 RAL-757 1433 chr3L 15600168 15600188 chr3L 15600253 15600255 5 78 11.5 0.0 5.8 0.7 87 chr3L 15600168 intron RhoGAP71E + chr3L 15600212 intron RhoGAP71E + chr3L 15600255 intron RhoGAP71E + chr3L_5_15600001 chr3L_15600001 RAL-757 1434 chr3L 15691413 15691445 chr3L 15691495 15691527 18 78 7.0 3.5 5.2 2.9 114 chr3L 15691413 intron CG34451 - chr3L 15691470 intron CG34451 - chr3L 15691527 intron CG34451 - chr3L_18_15690001 chr3L_15690001 RAL-757 1435 chr3L 15742960 15742990 chr3L 15743121 15743121 6 148 3.0 0.0 1.5 2.4 161 chr3L 15742960 intergenic not near genes chr3L 15743040 intergenic not near genes chr3L 15743121 intergenic not near genes chr3L_6_15740001 chr3L_15740001 RAL-757 1436 chr3L 15754381 15754395 chr3L 15754476 15754490 7 95 6.5 1.5 4.0 1.4 109 chr3L 15754381 intergenic not near genes chr3L 15754436 intergenic not near genes chr3L 15754490 intergenic not near genes chr3L_7_15750001 chr3L_15750001 RAL-757 1437 chr3L 15756878 15756907 chr3L 15756961 15756990 10 78 4.0 2.0 3.0 2.5 112 chr3L 15756878 intergenic not near genes chr3L 15756934 intergenic not near genes chr3L 15756990 intergenic not near genes chr3L_10_15755001 chr3L_15755001 RAL-757 1438 chr3L 15760846 15760847 chr3L 24821493 24821494 4 9060647 14.5 14.5 14.5 0.3 9060648 chr3L 15760846 intergenic not near genes chr3L 20291170 intron gogo - chr3L 24821494 intergenic not near genes chr3L_4_20290001 chr3L_20290001 RAL-757 1439 chr3L 15871600 15871614 chr3L 15871681 15871698 10 84 1.0 0.5 0.8 5.6 98 chr3L 15871600 intron pHCl - chr3L 15871649 intron pHCl - chr3L 15871698 intron pHCl - chr3L_10_15870001 chr3L_15870001 RAL-757 1440 chr3L 15883191 15883225 chr3L 15883482 15883518 17 286 4.0 3.5 3.8 3.5 327 chr3L 15883191 intron pHCl - chr3L 15883354 intron pHCl - chr3L 15883518 intron pHCl - chr3L_17_15880001 chr3L_15880001 RAL-757 1441 chr3L 15929219 15929229 chr3L 15938360 15938376 roo 6 9146 0.0 7.5 3.8 1.2 9157 chr3L 15929219 intron Pka-C3 - chr3L 15933798 intron Pka-C3 - chr3L 15938376 intron Pka-C3 - chr3L_6_15930001 chr3L_15930001 RAL-757 1442 chr3L 15981676 15981683 chr3L 15981762 15981769 4 86 12.5 6.5 9.5 0.4 93 chr3L 15981676 intron,3` UTR brm -,CG17027 + chr3L 15981722 intron,3` UTR brm -,CG17027 + chr3L 15981769 intron,3` UTR brm -,CG17027 + chr3L_4_15980001 chr3L_15980001 RAL-757 1443 chr3L 16070741 16070753 chr3L 16070818 16070829 7 77 4.5 4.5 4.5 1.3 88 chr3L 16070741 intron Mbs + chr3L 16070785 intron Mbs + chr3L 16070829 intron Mbs + chr3L_7_16070001 chr3L_16070001 RAL-757 1444 chr3L 16102270 16102295 chr3L 16102355 16102370 14 80 10.0 3.5 6.8 1.8 100 chr3L 16102270 exon CG5414 + chr3L 16102320 intron CG5414 + chr3L 16102370 intron CG5414 + chr3L_14_16100001 chr3L_16100001 RAL-757 1445 chr3L 16102297 16102300 chr3L 16102351 16102383 4 74 8.5 3.5 6.0 0.6 86 chr3L 16102297 exon CG5414 + chr3L 16102340 intron CG5414 + chr3L 16102383 intron CG5414 + chr3L_4_16100001 chr3L_16100001 RAL-757 1446 chr3L 16184086 16184122 chr3L 16188930 16188946 X-element 17 4840 9.5 3.0 6.2 2.4 4860 chr3L 16184086 intergenic not near genes chr3L 16186516 intergenic not near genes chr3L 16188946 intergenic not near genes chr3L_17_16185001 chr3L_16185001 RAL-757 1447 chr3L 16212810 16212844 chr3L 16212901 16212931 8 86 5.0 2.0 3.5 1.8 121 chr3L 16212810 intergenic CG13073 - chr3L 16212870 intergenic CG13073 - chr3L 16212931 intergenic CG13073 - chr3L_8_16210001 chr3L_16210001 RAL-757 1448 chr3L 16220161 16220170 chr3L 16220264 16220287 7 110 1.0 6.0 3.5 1.6 126 chr3L 16220161 intergenic not near genes chr3L 16220224 intergenic not near genes chr3L 16220287 intergenic not near genes chr3L_7_16220001 chr3L_16220001 RAL-757 1449 chr3L 16240769 16240772 chr3L 16240900 16240903 4 130 0.0 11.5 5.8 0.6 134 chr3L 16240769 intergenic not near genes chr3L 16240836 intergenic not near genes chr3L 16240903 intergenic not near genes chr3L_4_16240001 chr3L_16240001 RAL-757 1450 chr3L 16279085 16279103 chr3L 16279166 16279184 6 81 1.5 1.5 1.5 2.4 99 chr3L 16279085 intron CG13050 - chr3L 16279134 intron CG13050 - chr3L 16279184 intron CG13050 - chr3L_6_16275001 chr3L_16275001 RAL-757 1451 chr3L 16322829 16322851 chr3L 16322919 16322941 15 89 9.5 9.5 9.5 1.4 112 chr3L 16322829 intergenic not near genes chr3L 16322885 intergenic not near genes chr3L 16322941 intergenic not near genes chr3L_15_16320001 chr3L_16320001 RAL-757 1452 chr3L 16388009 16388022 chr3L 16388074 16388108 4 81 4.5 1.0 2.8 1.1 99 chr3L 16388009 exon RAF2 + chr3L 16388058 exon RAF2 + chr3L 16388108 exon RAF2 + chr3L_4_16385001 chr3L_16385001 RAL-757 1453 chr3L 16437066 16437098 chr3L 16437145 16437183 10 83 7.0 0.5 3.8 2.1 117 chr3L 16437066 intron,intron CG33158 +,dsx-c73A - chr3L 16437124 intron,intron CG33158 +,dsx-c73A - chr3L 16437183 intron,intron CG33158 +,dsx-c73A - chr3L_10_16435001 chr3L_16435001 RAL-757 1454 chr3L 16443849 16443878 chr3L 16446187 16446216 Doc 14 2333 4.0 6.0 5.0 2.3 2367 chr3L 16443849 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446216 intron,intron CG33158 +,dsx-c73A - chr3L_14_16445001 chr3L_16445001 RAL-757 1455 chr3L 16457529 16457558 chr3L 16457624 16457653 7 94 2.5 6.5 4.5 1.3 124 chr3L 16457529 intron CG33158 + chr3L 16457591 intron CG33158 + chr3L 16457653 intron CG33158 + chr3L_7_16455001 chr3L_16455001 RAL-757 1456 chr3L 16493975 16494011 chr3L 16494492 16494528 jockey 10 513 10.0 10.0 10.0 0.9 553 chr3L 16493975 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494252 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494528 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_10_16490001 chr3L_16490001 RAL-757 1457 chr3L 16533570 16533584 chr3L 16533681 16533685 6 108 2.0 5.5 3.8 1.2 115 chr3L 16533570 intron CG43373 - chr3L 16533628 intron CG43373 - chr3L 16533685 intron CG43373 - chr3L_6_16530001 chr3L_16530001 RAL-757 1458 chr3L 16540054 16540087 chr3L 16540142 16540154 13 86 5.5 4.0 4.8 2.2 100 chr3L 16540054 intron CG43373 - chr3L 16540104 intron CG43373 - chr3L 16540154 intron CG43373 - chr3L_13_16540001 chr3L_16540001 RAL-757 1459 chr3L 16610695 16610718 chr3L 16610774 16610774 7 78 5.0 4.5 4.8 1.2 79 chr3L 16610695 3` UTR Su(P) - chr3L 16610734 3` UTR Su(P) - chr3L 16610774 exon Su(P) - chr3L_7_16610001 chr3L_16610001 RAL-757 1460 chr3L 16616514 16616535 chr3L 16621837 16621863 297 4 5323 7.0 3.0 5.0 0.7 5349 chr3L 16616514 3` UTR Abl - chr3L 16619188 3` UTR Abl - chr3L 16621863 3` UTR Abl - chr3L_4_16615001 chr3L_16615001 RAL-757 1461 chr3L 16684022 16684052 chr3L 16689243 16689273 copia 13 5219 3.0 6.5 4.8 2.2 5251 chr3L 16684022 intron,intron Lasp -,CG43954 - chr3L 16686648 intron,intron Lasp -,CG43954 - chr3L 16689273 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_13_16685001 chr3L_16685001 RAL-757 1462 chr3L 16739383 16739405 chr3L 16739588 16739612 10 205 4.0 4.0 4.0 2.0 229 chr3L 16739383 intergenic CG9701 + chr3L 16739498 intergenic CG9701 + chr3L 16739612 intergenic CG9701 + chr3L_10_16735001 chr3L_16735001 RAL-757 1463 chr3L 16772492 16772513 chr3L 16772582 16772602 13 89 8.5 7.0 7.8 1.5 110 chr3L 16772492 intron Nrt + chr3L 16772547 intron Nrt + chr3L 16772602 intron Nrt + chr3L_13_16770001 chr3L_16770001 RAL-757 1464 chr3L 16808046 16808071 chr3L 16808117 16808147 14 74 6.5 0.0 3.2 3.3 101 chr3L 16808046 intron nudC + chr3L 16808096 intron nudC + chr3L 16808147 intron nudC + chr3L_14_16805001 chr3L_16805001 RAL-757 1465 chr3L 16815851 16815892 chr3L 16815937 16815955 4 74 0.0 6.0 3.0 1.0 104 chr3L 16815851 intron,intron nudC +,CG13024 - chr3L 16815903 intron,intron nudC +,CG13024 - chr3L 16815955 intron,intron nudC +,CG13024 - chr3L_4_16815001 chr3L_16815001 RAL-757 1466 chr3L 16818754 16818778 chr3L 16818822 16818839 15 69 4.0 6.0 5.0 2.5 85 chr3L 16818754 intron,intron nudC +,CG13024 - chr3L 16818796 intron,intron nudC +,CG13024 - chr3L 16818839 intron,intron nudC +,CG13024 - chr3L_15_16815001 chr3L_16815001 RAL-757 1467 chr3L 16861029 16861049 chr3L 16861129 16861151 16 100 5.5 4.0 4.8 2.8 122 chr3L 16861029 intron,exon Rh4 -,CG13029 + chr3L 16861090 intron,intron Rh4 -,CG13029 + chr3L 16861151 intron,intron Rh4 -,CG13029 + chr3L_16_16860001 chr3L_16860001 RAL-757 1468 chr3L 16873339 16873371 chr3L 16873441 16873472 13 101 7.0 4.5 5.8 1.9 133 chr3L 16873339 intron Lmpt + chr3L 16873406 intron Lmpt + chr3L 16873472 intron Lmpt + chr3L_13_16870001 chr3L_16870001 RAL-757 1469 chr3L 16876452 16876468 chr3L 16876537 16876549 8 84 7.0 4.0 5.5 1.2 97 chr3L 16876452 intron Lmpt + chr3L 16876500 intron Lmpt + chr3L 16876549 intron Lmpt + chr3L_8_16875001 chr3L_16875001 RAL-757 1470 chr3L 16945729 16945760 chr3L 16954882 16954913 roo 8 9145 6.0 3.5 4.8 1.4 9184 chr3L 16945729 exon Obp73a + chr3L 16950321 intergenic not near genes chr3L 16954913 5` UTR Nc73EF + chr3L_8_16950001 chr3L_16950001 RAL-757 1471 chr3L 17026788 17026815 chr3L 17026869 17026879 13 74 13.5 4.5 9.0 1.3 91 chr3L 17026788 exon Fit2 + chr3L 17026834 3` UTR Fit2 + chr3L 17026879 3` UTR Fit2 + chr3L_13_17025001 chr3L_17025001 RAL-757 1472 chr3L 17027170 17027183 chr3L 17027261 17027274 5 92 1.5 4.0 2.8 1.3 104 chr3L 17027170 intergenic Fit2 +,CG7730 + chr3L 17027222 intergenic Fit2 +,CG7730 + chr3L 17027274 intergenic Fit2 +,CG7730 + chr3L_5_17025001 chr3L_17025001 RAL-757 1473 chr3L 17034937 17034940 chr3L 17035122 17035128 G2 5 187 6.0 3.0 4.5 0.9 191 chr3L 17034937 intergenic not near genes chr3L 17035032 intergenic not near genes chr3L 17035128 intergenic not near genes chr3L_5_17035001 chr3L_17035001 RAL-757 1474 chr3L 17034953 17034968 chr3L 17035120 17035156 G2 6 184 2.5 3.0 2.8 1.6 203 chr3L 17034953 intergenic not near genes chr3L 17035054 intergenic not near genes chr3L 17035156 intergenic not near genes chr3L_6_17035001 chr3L_17035001 RAL-757 1475 chr3L 17085005 17085035 chr3L 17094154 17094184 roo 20 9148 6.0 6.5 6.2 2.8 9179 chr3L 17085005 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094184 intron Rbp6 - chr3L_20_17085001 chr3L_17085001 RAL-757 1476 chr3L 17120652 17120685 chr3L 17120728 17120756 21 74 3.5 6.5 5.0 3.5 104 chr3L 17120652 intron Rbp6 - chr3L 17120704 intron Rbp6 - chr3L 17120756 intron Rbp6 - chr3L_21_17120001 chr3L_17120001 RAL-757 1477 chr3L 17149163 17149180 chr3L 17149244 17149261 9 78 8.0 0.0 4.0 1.8 98 chr3L 17149163 intron Rbp6 - chr3L 17149212 intron Rbp6 - chr3L 17149261 intron Rbp6 - chr3L_9_17145001 chr3L_17145001 RAL-757 1478 chr3L 17202467 17202494 chr3L 17202629 17202656 13 161 6.0 2.5 4.2 2.5 189 chr3L 17202467 intron Rbp6 - chr3L 17202562 intron Rbp6 - chr3L 17202656 intron Rbp6 - chr3L_13_17200001 chr3L_17200001 RAL-757 1479 chr3L 17202898 17202930 chr3L 17202986 17202986 7 81 3.5 2.0 2.8 1.8 88 chr3L 17202898 intron Rbp6 - chr3L 17202942 intron Rbp6 - chr3L 17202986 intron Rbp6 - chr3L_7_17200001 chr3L_17200001 RAL-757 1480 chr3L 17272255 17272266 chr3L 17272382 17272399 4 132 1.0 4.5 2.8 1.1 144 chr3L 17272255 intergenic not near genes chr3L 17272327 intergenic not near genes chr3L 17272399 intergenic not near genes chr3L_4_17270001 chr3L_17270001 RAL-757 1481 chr3L 17510760 17510765 chr3L 17510828 17510846 4 79 1.5 3.5 2.5 1.1 86 chr3L 17510760 exon Oatp74D + chr3L 17510803 intron Oatp74D + chr3L 17510846 intron Oatp74D + chr3L_4_17510001 chr3L_17510001 RAL-757 1482 chr3L 17516986 17517003 chr3L 17524536 17524561 412 8 7552 11.0 6.0 8.5 0.8 7575 chr3L 17516986 intron CG7564 + chr3L 17520774 intron CG7564 + chr3L 17524561 3` UTR CG7564 + chr3L_8_17520001 chr3L_17520001 RAL-757 1483 chr3L 17578543 17578569 chr3L 17578644 17578655 10 98 2.5 0.0 1.2 4.5 112 chr3L 17578543 intron Eip74EF - chr3L 17578599 intron Eip74EF - chr3L 17578655 intron Eip74EF - chr3L_10_17575001 chr3L_17575001 RAL-757 1484 chr3L 17583536 17583544 chr3L 17583615 17583637 4 89 5.0 11.0 8.0 0.4 101 chr3L 17583536 intron Eip74EF - chr3L 17583586 intron Eip74EF - chr3L 17583637 intron Eip74EF - chr3L_4_17580001 chr3L_17580001 RAL-757 1485 chr3L 17586965 17587001 chr3L 17587099 17587135 14 133 4.5 4.0 4.2 2.7 170 chr3L 17586965 intron Eip74EF - chr3L 17587050 intron Eip74EF - chr3L 17587135 intron Eip74EF - chr3L_14_17585001 chr3L_17585001 RAL-757 1486 chr3L 17592787 17592818 chr3L 17592878 17592902 11 87 2.5 4.0 3.2 2.6 115 chr3L 17592787 intron Eip74EF - chr3L 17592844 intron Eip74EF - chr3L 17592902 intron Eip74EF - chr3L_11_17590001 chr3L_17590001 RAL-757 1487 chr3L 17594245 17594253 chr3L 17594326 17594333 4 80 7.0 6.5 6.8 0.5 88 chr3L 17594245 intron Eip74EF - chr3L 17594289 intron Eip74EF - chr3L 17594333 intron Eip74EF - chr3L_4_17590001 chr3L_17590001 RAL-757 1488 chr3L 17594254 17594274 chr3L 17594323 17594350 12 76 2.5 6.5 4.5 2.2 96 chr3L 17594254 intron Eip74EF - chr3L 17594302 intron Eip74EF - chr3L 17594350 intron Eip74EF - chr3L_12_17590001 chr3L_17590001 RAL-757 1489 chr3L 17789844 17789876 chr3L 17789919 17789952 14 74 2.0 9.0 5.5 2.2 108 chr3L 17789844 intergenic not near genes chr3L 17789898 intergenic not near genes chr3L 17789952 intergenic not near genes chr3L_14_17785001 chr3L_17785001 RAL-757 1490 chr3L 17799821 17799841 chr3L 17801608 17801628 S-element 7 1786 4.5 7.0 5.8 1.0 1807 chr3L 17799821 intron NUCB1 - chr3L 17800724 intron NUCB1 - chr3L 17801628 intron NUCB1 - chr3L_7_17800001 chr3L_17800001 RAL-757 1491 chr3L 17884694 17884712 chr3L 17884794 17884812 11 99 1.5 6.0 3.8 2.3 118 chr3L 17884694 intergenic CG5506 - chr3L 17884753 intergenic CG5506 - chr3L 17884812 intergenic CG5506 - chr3L_11_17880001 chr3L_17880001 RAL-757 1492 chr3L 17918372 17918403 chr3L 17921175 17921206 opus 10 2803 3.0 4.0 3.5 2.2 2834 chr3L 17918372 intergenic not near genes chr3L 17919789 intergenic not near genes chr3L 17921206 intergenic not near genes chr3L_10_17915001 chr3L_17915001 RAL-757 1493 chr3L 17986876 17986892 chr3L 17986959 17986965 7 81 12.5 3.5 8.0 0.8 89 chr3L 17986876 intron Eip75B - chr3L 17986920 intron Eip75B - chr3L 17986965 intron Eip75B - chr3L_7_17985001 chr3L_17985001 RAL-757 1494 chr3L 17991569 17991589 chr3L 17991647 17991667 10 77 8.5 4.0 6.2 1.4 98 chr3L 17991569 intron Eip75B - chr3L 17991618 intron Eip75B - chr3L 17991667 intron Eip75B - chr3L_10_17990001 chr3L_17990001 RAL-757 1495 chr3L 18013978 18014005 chr3L 18014066 18014079 9 87 5.0 0.0 2.5 2.6 101 chr3L 18013978 intron Eip75B - chr3L 18014028 intron Eip75B - chr3L 18014079 intron Eip75B - chr3L_9_18010001 chr3L_18010001 RAL-757 1496 chr3L 18029967 18029986 chr3L 18030034 18030062 12 75 6.0 0.0 3.0 3.0 95 chr3L 18029967 intron Eip75B - chr3L 18030014 intron Eip75B - chr3L 18030062 intron Eip75B - chr3L_12_18030001 chr3L_18030001 RAL-757 1497 chr3L 18045039 18045047 chr3L 18045092 18045117 8 66 2.5 3.5 3.0 2.0 78 chr3L 18045039 intron Eip75B - chr3L 18045078 intron Eip75B - chr3L 18045117 intron Eip75B - chr3L_8_18045001 chr3L_18045001 RAL-757 1498 chr3L 18047705 18047737 chr3L 18056762 18056794 roo 10 9056 2.5 2.0 2.2 3.1 9089 chr3L 18047705 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056794 intron Eip75B - chr3L_10_18050001 chr3L_18050001 RAL-757 1499 chr3L 18092134 18092144 chr3L 18092216 18092226 10 81 0.0 2.5 1.2 4.5 92 chr3L 18092134 intron CG13698 - chr3L 18092180 intron CG13698 - chr3L 18092226 intron CG13698 - chr3L_10_18090001 chr3L_18090001 RAL-757 1500 chr3L 18119671 18119679 chr3L 18119765 18119777 8 96 0.5 11.5 6.0 1.1 106 chr3L 18119671 intron CG7341 + chr3L 18119724 intron CG7341 + chr3L 18119777 intron CG7341 + chr3L_8_18115001 chr3L_18115001 RAL-757 1501 chr3L 18133025 18133047 chr3L 18133115 18133137 9 90 7.0 2.0 4.5 1.6 112 chr3L 18133025 intergenic Cyp312a1 - chr3L 18133081 intergenic Cyp312a1 - chr3L 18133137 intergenic Cyp312a1 - chr3L_9_18130001 chr3L_18130001 RAL-757 1502 chr3L 18135697 18135706 chr3L 18135788 18135796 4 91 5.0 0.5 2.8 1.1 99 chr3L 18135697 intergenic CR44669 - chr3L 18135746 intergenic CR44669 - chr3L 18135796 3` UTR CR44669 - chr3L_4_18135001 chr3L_18135001 RAL-757 1503 chr3L 18171864 18171889 chr3L 18171955 18171957 11 88 6.0 0.5 3.2 2.6 93 chr3L 18171864 intron W - chr3L 18171910 intron W - chr3L 18171957 intron W - chr3L_11_18170001 chr3L_18170001 RAL-757 1504 chr3L 18172694 18172704 chr3L 18172770 18172780 6 74 6.0 4.0 5.0 1.0 86 chr3L 18172694 intron W - chr3L 18172737 intron W - chr3L 18172780 intron W - chr3L_6_18170001 chr3L_18170001 RAL-757 1505 chr3L 18198929 18198931 chr3L 24821492 24821494 13 6622563 0.0 14.5 7.2 1.6 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_13_21510001 chr3L_21510001 RAL-757 1506 chr3L 18203600 18203607 chr3L 18203687 18203702 8 94 12.0 0.0 6.0 1.1 102 chr3L 18203600 3` UTR CG7320 + chr3L 18203651 intergenic CG7320 + chr3L 18203702 intergenic CG7320 + chr3L_8_18200001 chr3L_18200001 RAL-757 1507 chr3L 18223164 18223186 chr3L 18223247 18223269 7 81 5.0 0.5 2.8 1.8 105 chr3L 18223164 intergenic not near genes chr3L 18223216 intergenic not near genes chr3L 18223269 intergenic not near genes chr3L_7_18220001 chr3L_18220001 RAL-757 1508 chr3L 18262470 18262489 chr3L 18262553 18262571 12 80 3.0 3.0 3.0 3.0 101 chr3L 18262470 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262571 intergenic not near genes chr3L_12_18260001 chr3L_18260001 RAL-757 1509 chr3L 18277869 18277883 chr3L 18278177 18278185 6 308 5.0 9.0 7.0 0.8 316 chr3L 18277869 intergenic not near genes chr3L 18278027 intergenic not near genes chr3L 18278185 intergenic not near genes chr3L_6_18275001 chr3L_18275001 RAL-757 1510 chr3L 18301349 18301380 chr3L 18301438 18301469 20 88 0.5 4.0 2.2 6.2 120 chr3L 18301349 intergenic CG13700 - chr3L 18301409 intergenic CG13700 - chr3L 18301469 intergenic CG13700 - chr3L_20_18300001 chr3L_18300001 RAL-757 1511 chr3L 18376098 18376113 chr3L 18376169 18376202 6 82 4.0 1.0 2.5 1.7 104 chr3L 18376098 intergenic not near genes chr3L 18376150 intergenic not near genes chr3L 18376202 intergenic not near genes chr3L_6_18375001 chr3L_18375001 RAL-757 1512 chr3L 18408732 18408761 chr3L 18408818 18408847 10 84 5.5 3.5 4.5 1.8 115 chr3L 18408732 intergenic not near genes chr3L 18408790 intergenic not near genes chr3L 18408847 intergenic not near genes chr3L_10_18405001 chr3L_18405001 RAL-757 1513 chr3L 18438288 18438325 chr3L 18438364 18438399 19 72 3.5 6.0 4.8 3.3 111 chr3L 18438288 intergenic skl - chr3L 18438344 intergenic skl - chr3L 18438399 intergenic skl - chr3L_19_18435001 chr3L_18435001 RAL-757 1514 chr3L 18445253 18445271 chr3L 18445331 18445349 4 78 5.0 2.5 3.8 0.8 96 chr3L 18445253 intergenic not near genes chr3L 18445301 intergenic not near genes chr3L 18445349 intergenic not near genes chr3L_4_18445001 chr3L_18445001 RAL-757 1515 chr3L 18456274 18456292 chr3L 18456361 18456376 7 86 7.5 6.5 7.0 0.9 102 chr3L 18456274 intergenic CR44670 - chr3L 18456325 intergenic CR44670 - chr3L 18456376 intergenic CR44670 - chr3L_7_18455001 chr3L_18455001 RAL-757 1516 chr3L 18456297 18456301 chr3L 18456360 18456389 4 82 5.5 6.0 5.8 0.6 92 chr3L 18456297 intergenic CR44670 - chr3L 18456343 intergenic CR44670 - chr3L 18456389 intergenic CR44670 - chr3L_4_18455001 chr3L_18455001 RAL-757 1517 chr3L 18479073 18479094 chr3L 18479163 18479175 6 86 2.0 1.0 1.5 2.4 102 chr3L 18479073 5` UTR CR44673 + chr3L 18479124 5` UTR CR44673 + chr3L 18479175 5` UTR CR44673 + chr3L_6_18475001 chr3L_18475001 RAL-757 1518 chr3L 18494920 18494949 chr3L 18495112 18495136 11 189 1.5 8.0 4.8 1.9 216 chr3L 18494920 intron AstC-R2 - chr3L 18495028 intron AstC-R2 - chr3L 18495136 intron AstC-R2 - chr3L_11_18495001 chr3L_18495001 RAL-757 1519 chr3L 18528625 18528661 chr3L 18537786 18537822 roo 17 9160 1.0 6.0 3.5 3.8 9197 chr3L 18528625 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537822 intergenic not near genes chr3L_17_18530001 chr3L_18530001 RAL-757 1520 chr3L 18546704 18546726 chr3L 18546798 18546820 8 94 2.5 4.5 3.5 1.8 116 chr3L 18546704 intergenic not near genes chr3L 18546762 intergenic not near genes chr3L 18546820 intergenic not near genes chr3L_8_18545001 chr3L_18545001 RAL-757 1521 chr3L 18593950 18593962 chr3L 18595930 18595941 Doc 8 1980 12.5 4.0 8.2 0.9 1991 chr3L 18593950 intergenic term - chr3L 18594946 intergenic not near genes chr3L 18595941 intergenic CR45389 + chr3L_8_18590001 chr3L_18590001 RAL-757 1522 chr3L 18593963 18593966 chr3L 18595926 18595946 Doc 6 1975 10.5 3.0 6.8 0.8 1983 chr3L 18593963 intergenic term - chr3L 18594954 intergenic not near genes chr3L 18595946 intergenic CR45389 + chr3L_6_18590001 chr3L_18590001 RAL-757 1523 chr3L 18593969 18593982 chr3L 18595936 18595957 Doc 8 1975 8.0 4.0 6.0 1.1 1988 chr3L 18593969 intergenic term - chr3L 18594963 intergenic not near genes chr3L 18595957 intergenic CR45389 + chr3L_8_18590001 chr3L_18590001 RAL-757 1524 chr3L 18606747 18606781 chr3L 18606945 18606979 15 192 4.0 5.0 4.5 2.7 232 chr3L 18606747 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606863 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606979 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_15_18605001 chr3L_18605001 RAL-757 1525 chr3L 18656186 18656220 chr3L 18656267 18656286 19 79 4.0 3.5 3.8 4.0 100 chr3L 18656186 intron MYPT-75D + chr3L 18656236 intron MYPT-75D + chr3L 18656286 intron MYPT-75D + chr3L_19_18655001 chr3L_18655001 RAL-757 1526 chr3L 18701132 18701164 chr3L 18701220 18701252 13 87 4.5 4.0 4.2 2.5 120 chr3L 18701132 intergenic not near genes chr3L 18701192 intergenic not near genes chr3L 18701252 intergenic not near genes chr3L_13_18700001 chr3L_18700001 RAL-757 1527 chr3L 18710757 18710791 chr3L 18718709 18718743 Stalker2 15 7946 5.0 6.5 5.8 2.2 7986 chr3L 18710757 intergenic not near genes chr3L 18714750 intergenic not near genes chr3L 18718743 intergenic not near genes chr3L_15_18710001 chr3L_18710001 RAL-757 1528 chr3L 18753549 18753564 chr3L 18753631 18753646 11 82 2.0 5.5 3.8 2.3 97 chr3L 18753549 intron ftz-f1 - chr3L 18753598 intron ftz-f1 - chr3L 18753646 intron ftz-f1 - chr3L_11_18750001 chr3L_18750001 RAL-757 1529 chr3L 18772411 18772442 chr3L 18781087 18781122 roo 13 8676 3.5 6.5 5.0 2.2 8711 chr3L 18772411 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781122 intron ftz-f1 - chr3L_13_18775001 chr3L_18775001 RAL-757 1530 chr3L 18969549 18969576 chr3L 18969625 18969629 11 68 5.5 4.0 4.8 1.9 80 chr3L 18969549 intergenic not near genes chr3L 18969589 intergenic not near genes chr3L 18969629 intergenic not near genes chr3L_11_18965001 chr3L_18965001 RAL-757 1531 chr3L 19008854 19008873 chr3L 19009176 19009184 jockey 11 330 5.5 5.0 5.2 1.8 330 chr3L 19008854 intron nkd - chr3L 19009019 intron nkd - chr3L 19009184 intron nkd - chr3L_11_19005001 chr3L_19005001 RAL-757 1532 chr3L 19115636 19115669 chr3L 19115816 19115825 BS 10 177 11.0 3.0 7.0 1.2 189 chr3L 19115636 intron CG14082 - chr3L 19115730 intron CG14082 - chr3L 19115825 intron CG14082 - chr3L_10_19115001 chr3L_19115001 RAL-757 1533 chr3L 19117046 19117076 chr3L 19124489 19124523 mdg1 8 7445 8.5 5.0 6.8 1.0 7477 chr3L 19117046 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124523 intron CG14082 - chr3L_8_19120001 chr3L_19120001 RAL-757 1534 chr3L 19182384 19182414 chr3L 19182465 19182480 10 74 4.5 2.0 3.2 2.4 96 chr3L 19182384 intron fz2 - chr3L 19182432 intron fz2 - chr3L 19182480 intron fz2 - chr3L_10_19180001 chr3L_19180001 RAL-757 1535 chr3L 19208067 19208090 chr3L 19209432 19209461 Doc 5 1369 3.0 1.5 2.2 1.6 1394 chr3L 19208067 intron fz2 - chr3L 19208764 intron fz2 - chr3L 19209461 intron fz2 - chr3L_5_19205001 chr3L_19205001 RAL-757 1536 chr3L 19210118 19210142 chr3L 19210214 19210238 4 96 1.5 4.0 2.8 1.1 120 chr3L 19210118 intron fz2 - chr3L 19210178 intron fz2 - chr3L 19210238 intron fz2 - chr3L_4_19210001 chr3L_19210001 RAL-757 1537 chr3L 19275943 19275961 chr3L 19276019 19276021 6 73 1.5 9.0 5.2 1.0 78 chr3L 19275943 5` UTR CG14086 + chr3L 19275982 5` UTR CG14086 + chr3L 19276021 5` UTR CG14086 + chr3L_6_19275001 chr3L_19275001 RAL-757 1538 chr3L 19365918 19365924 chr3L 19366015 19366021 4 97 0.0 10.5 5.2 0.6 103 chr3L 19365918 intron CG32206 - chr3L 19365970 intron CG32206 - chr3L 19366021 intron CG32206 - chr3L_4_19365001 chr3L_19365001 RAL-757 1539 chr3L 19390723 19390760 chr3L 19390821 19390857 5 95 3.0 5.0 4.0 1.0 134 chr3L 19390723 intron CG32206 - chr3L 19390790 intron CG32206 - chr3L 19390857 intron CG32206 - chr3L_5_19390001 chr3L_19390001 RAL-757 1540 chr3L 19498429 19498456 chr3L 19503656 19503682 9 5227 42.0 24.0 33.0 0.3 5253 chr3L 19498429 3` UTR CG9451 - chr3L 19501056 3` UTR CG9452 - chr3L 19503682 5` UTR CG9452 - chr3L_9_19500001 chr3L_19500001 RAL-757 1541 chr3L 19527924 19527956 chr3L 19528003 19528035 10 74 5.0 2.5 3.8 2.1 111 chr3L 19527924 intergenic not near genes chr3L 19527980 intergenic not near genes chr3L 19528035 intergenic not near genes chr3L_10_19525001 chr3L_19525001 RAL-757 1542 chr3L 19544241 19544269 chr3L 19544311 19544345 12 73 4.5 4.0 4.2 2.3 104 chr3L 19544241 intergenic CG9279 -,l(3)76BDr - chr3L 19544293 intergenic l(3)76BDr -,CG9279 - chr3L 19544345 3` UTR l(3)76BDr - chr3L_12_19540001 chr3L_19540001 RAL-757 1543 chr3L 19820298 19820319 chr3L 19827847 19827862 412 7 7546 3.5 3.0 3.2 1.7 7564 chr3L 19820298 intron Deaf1 + chr3L 19824080 intron Deaf1 + chr3L 19827862 intron Deaf1 + chr3L_7_19820001 chr3L_19820001 RAL-757 1544 chr3L 19848504 19848533 chr3L 19857694 19857697 roo 12 9183 6.5 7.5 7.0 1.5 9193 chr3L 19848504 intron Papss + chr3L 19853100 intron Papss + chr3L 19857697 intron Papss + chr3L_12_19850001 chr3L_19850001 RAL-757 1545 chr3L 19861821 19861852 chr3L 19863609 19863640 S-element 11 1787 11.5 3.5 7.5 1.3 1819 chr3L 19861821 5` UTR CR45433 + chr3L 19862730 intergenic not near genes chr3L 19863640 intergenic not near genes chr3L_11_19860001 chr3L_19860001 RAL-757 1546 chr3L 19935201 19935221 chr3L 19935665 19935685 11 461 3.5 9.0 6.2 1.5 484 chr3L 19935201 intergenic not near genes chr3L 19935443 intergenic not near genes chr3L 19935685 intergenic not near genes chr3L_11_19935001 chr3L_19935001 RAL-757 1547 chr3L 19961280 19961308 chr3L 19961491 19961519 6 211 4.0 2.5 3.2 1.4 239 chr3L 19961280 intron Ac76E + chr3L 19961400 intron Ac76E + chr3L 19961519 intron Ac76E + chr3L_6_19960001 chr3L_19960001 RAL-757 1548 chr3L 19981207 19981232 chr3L 19981286 19981311 12 77 3.5 6.5 5.0 2.0 104 chr3L 19981207 intergenic CG17732 + chr3L 19981259 intergenic CG17732 + chr3L 19981311 intergenic CG17732 + chr3L_12_19980001 chr3L_19980001 RAL-757 1549 chr3L 20086788 20086794 chr3L 20086866 20086872 8 78 8.0 0.5 4.2 1.5 84 chr3L 20086788 intron sNPF-R - chr3L 20086830 intron sNPF-R - chr3L 20086872 intron sNPF-R - chr3L_8_20085001 chr3L_20085001 RAL-757 1550 chr3L 20086795 20086816 chr3L 20086862 20086894 14 75 3.5 0.5 2.0 4.7 99 chr3L 20086795 intron sNPF-R - chr3L 20086844 intron sNPF-R - chr3L 20086894 intron sNPF-R - chr3L_14_20085001 chr3L_20085001 RAL-757 1551 chr3L 20113474 20113507 chr3L 20113569 20113602 21 93 7.5 2.5 5.0 3.5 128 chr3L 20113474 intergenic not near genes chr3L 20113538 intergenic not near genes chr3L 20113602 intergenic not near genes chr3L_21_20110001 chr3L_20110001 RAL-757 1552 chr3L 20113662 20113686 chr3L 20122919 20122943 roo 8 9254 6.5 6.0 6.2 1.1 9281 chr3L 20113662 intergenic not near genes chr3L 20118302 intergenic not near genes chr3L 20122943 intergenic not near genes chr3L_8_20115001 chr3L_20115001 RAL-757 1553 chr3L 20148284 20148313 chr3L 20148374 20148403 9 89 6.0 4.5 5.2 1.5 119 chr3L 20148284 intergenic not near genes chr3L 20148344 intergenic not near genes chr3L 20148403 intergenic not near genes chr3L_9_20145001 chr3L_20145001 RAL-757 1554 chr3L 20257337 20257363 chr3L 20258457 20258483 pogo 11 1119 1.5 5.0 3.2 2.6 1146 chr3L 20257337 intron rdgC + chr3L 20257910 intron rdgC + chr3L 20258483 intron rdgC + chr3L_11_20255001 chr3L_20255001 RAL-757 1555 chr3L 20386938 20386958 chr3L 20387040 20387060 9 102 6.5 3.0 4.8 1.6 122 chr3L 20386938 intron fbl + chr3L 20386999 intron fbl + chr3L 20387060 intron fbl + chr3L_9_20385001 chr3L_20385001 RAL-757 1556 chr3L 20426200 20426230 chr3L 20426368 20426398 15 167 8.0 9.0 8.5 1.6 198 chr3L 20426200 3` UTR CG5274 - chr3L 20426299 3` UTR CG5274 - chr3L 20426398 exon CG5274 - chr3L_15_20425001 chr3L_20425001 RAL-757 1557 chr3L 20476757 20476786 chr3L 20484351 20484385 springer 15 7597 5.5 6.5 6.0 2.1 7628 chr3L 20476757 3` UTR isoQC + chr3L 20480571 intergenic not near genes chr3L 20484385 3` UTR ZnT77C - chr3L_15_20480001 chr3L_20480001 RAL-757 1558 chr3L 20490751 20490774 chr3L 20490896 20490919 6 145 5.0 5.0 5.0 1.0 168 chr3L 20490751 intron ZnT77C - chr3L 20490835 intron ZnT77C - chr3L 20490919 intron ZnT77C - chr3L_6_20490001 chr3L_20490001 RAL-757 1559 chr3L 20525229 20525229 chr3L 22908066 22908067 4 2382837 7.5 40.5 24.0 0.2 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-757 1560 chr3L 20525230 20525230 chr3L 24821493 24821494 4 4296264 7.5 14.5 11.0 0.3 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-757 1561 chr3L 20590069 20590095 chr3L 20590606 20590623 412 4 530 4.0 3.0 3.5 0.9 554 chr3L 20590069 intergenic not near genes chr3L 20590346 intergenic not near genes chr3L 20590623 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-757 1562 chr3L 20710762 20710792 chr3L 20710839 20710859 11 74 2.0 4.0 3.0 2.8 97 chr3L 20710762 intergenic not near genes chr3L 20710810 intergenic not near genes chr3L 20710859 intergenic not near genes chr3L_11_20710001 chr3L_20710001 RAL-757 1563 chr3L 20821282 20821311 chr3L 20824740 20824779 NOF 7 3463 1.5 4.5 3.0 1.8 3497 chr3L 20821282 intron Pka-R1 + chr3L 20823030 intron Pka-R1 + chr3L 20824779 intron Pka-R1 + chr3L_7_20820001 chr3L_20820001 RAL-757 1564 chr3L 20849276 20849302 chr3L 20849353 20849356 15 76 6.0 6.5 6.2 2.1 80 chr3L 20849276 intron CG32432 - chr3L 20849316 intron CG32432 - chr3L 20849356 intron CG32432 - chr3L_15_20845001 chr3L_20845001 RAL-757 1565 chr3L 21082220 21082230 chr3L 21082298 21082302 7 77 7.0 9.0 8.0 0.8 82 chr3L 21082220 intron ko - chr3L 21082261 intron ko - chr3L 21082302 intron ko - chr3L_7_21080001 chr3L_21080001 RAL-757 1566 chr3L 21082234 21082238 chr3L 21082297 21082316 5 74 5.5 8.5 7.0 0.6 82 chr3L 21082234 intron ko - chr3L 21082275 intron ko - chr3L 21082316 intron ko - chr3L_5_21080001 chr3L_21080001 RAL-757 1567 chr3L 21151862 21151897 chr3L 21156946 21156981 flea 15 5083 7.0 8.0 7.5 1.8 5119 chr3L 21151862 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21156981 intron Ac78C - chr3L_15_21150001 chr3L_21150001 RAL-757 1568 chr3L 21161664 21161690 chr3L 21161737 21161745 11 72 2.0 6.5 4.2 2.1 81 chr3L 21161664 intron Ac78C - chr3L 21161704 intron Ac78C - chr3L 21161745 intron Ac78C - chr3L_11_21160001 chr3L_21160001 RAL-757 1569 chr3L 21172836 21172871 chr3L 21172936 21172974 7 102 3.5 3.0 3.2 1.7 138 chr3L 21172836 intergenic chb +,asparagine-synthetase + chr3L 21172905 5` UTR chb + chr3L 21172974 5` UTR chb + chr3L_7_21170001 chr3L_21170001 RAL-757 1570 chr3L 21186053 21186087 chr3L 21186129 21186140 4 66 3.5 5.0 4.2 0.8 87 chr3L 21186053 intron CG42337 - chr3L 21186096 intron CG42337 - chr3L 21186140 intron CG42337 - chr3L_4_21185001 chr3L_21185001 RAL-757 1571 chr3L 21306145 21306180 chr3L 21315304 21315339 roo 20 9153 4.0 4.5 4.2 3.8 9194 chr3L 21306145 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310742 intron Pc - chr3L 21315339 3` UTR Pc - chr3L_20_21310001 chr3L_21310001 RAL-757 1572 chr3L 21319528 21319557 chr3L 21319618 21319639 9 86 8.5 8.5 8.5 0.9 111 chr3L 21319528 5` UTR Rab26 + chr3L 21319584 5` UTR Rab26 + chr3L 21319639 5` UTR Rab26 + chr3L_9_21315001 chr3L_21315001 RAL-757 1573 chr3L 21407010 21407027 chr3L 21407072 21407095 4 71 6.5 3.5 5.0 0.7 85 chr3L 21407010 intron rgn + chr3L 21407052 intron rgn + chr3L 21407095 intron rgn + chr3L_4_21405001 chr3L_21405001 RAL-757 1574 chr3L 21458341 21458358 chr3L 21458436 21458448 INE-1 12 92 9.0 3.5 6.2 1.7 107 chr3L 21458341 intergenic not near genes chr3L 21458394 intergenic not near genes chr3L 21458448 intergenic not near genes chr3L_12_21455001 chr3L_21455001 RAL-757 1575 chr3L 21498852 21498869 chr3L 21500469 21500505 1360 5 1623 4.5 4.5 4.5 0.9 1653 chr3L 21498852 intron Glg1 - chr3L 21499678 intron Glg1 - chr3L 21500505 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-757 1576 chr3L 21749327 21749339 chr3L 21754487 21754499 Doc 6 5160 8.5 7.0 7.8 0.7 5172 chr3L 21749327 intron Syn1 - chr3L 21751913 intron Syn1 - chr3L 21754499 intron Syn1 - chr3L_6_21750001 chr3L_21750001 RAL-757 1577 chr3L 21776675 21776703 chr3L 21776762 21776790 8 86 0.5 2.0 1.2 3.6 115 chr3L 21776675 intron,intron CG42689 +,CG42552 + chr3L 21776732 intron,intron CG42689 +,CG42552 + chr3L 21776790 intron,intron CG42689 +,CG42552 + chr3L_8_21775001 chr3L_21775001 RAL-757 1578 chr3L 21794276 21794307 chr3L 21794393 21794417 12 113 6.0 6.0 6.0 1.7 141 chr3L 21794276 intergenic not near genes chr3L 21794346 intergenic not near genes chr3L 21794417 intergenic not near genes chr3L_12_21790001 chr3L_21790001 RAL-757 1579 chr3L 21799936 21799970 chr3L 21800021 21800047 19 81 4.0 5.5 4.8 3.3 111 chr3L 21799936 intergenic not near genes chr3L 21799992 intergenic not near genes chr3L 21800047 intergenic not near genes chr3L_19_21795001 chr3L_21795001 RAL-757 1580 chr3L 21824504 21824528 chr3L 21824595 21824606 7 90 5.5 3.0 4.2 1.3 102 chr3L 21824504 3` UTR CG7407 + chr3L 21824555 3` UTR CG7407 + chr3L 21824606 intergenic CG7407 +,CG7414 + chr3L_7_21820001 chr3L_21820001 RAL-757 1581 chr3L 21836734 21836761 chr3L 21836810 21836847 15 81 3.5 5.5 4.5 2.7 113 chr3L 21836734 3` UTR P5CDh1 - chr3L 21836790 3` UTR P5CDh1 - chr3L 21836847 3` UTR P5CDh1 - chr3L_15_21835001 chr3L_21835001 RAL-757 1582 chr3L 21849502 21849529 chr3L 21849584 21849611 13 78 3.5 4.5 4.0 2.6 109 chr3L 21849502 intron mub + chr3L 21849556 intron mub + chr3L 21849611 intron mub + chr3L_13_21845001 chr3L_21845001 RAL-757 1583 chr3L 21872497 21872525 chr3L 21872726 21872727 16 223 6.5 6.5 6.5 2.1 230 chr3L 21872497 intron mub + chr3L 21872612 intron mub + chr3L 21872727 intron mub + chr3L_16_21870001 chr3L_21870001 RAL-757 1584 chr3L 21876937 21876964 chr3L 21877030 21877056 12 91 2.0 5.0 3.5 2.7 119 chr3L 21876937 intron mub + chr3L 21876996 intron mub + chr3L 21877056 intron mub + chr3L_12_21875001 chr3L_21875001 RAL-757 1585 chr3L 21891148 21891178 chr3L 21891257 21891286 19 108 3.0 6.0 4.5 3.5 138 chr3L 21891148 intron mub + chr3L 21891217 intron mub + chr3L 21891286 intron mub + chr3L_19_21890001 chr3L_21890001 RAL-757 1586 chr3L 21905485 21905513 chr3L 21905587 21905614 5 101 4.5 1.0 2.8 1.3 129 chr3L 21905485 intron mub + chr3L 21905550 intron mub + chr3L 21905614 intron mub + chr3L_5_21905001 chr3L_21905001 RAL-757 1587 chr3L 21994438 21994465 chr3L 21994519 21994536 12 80 5.0 7.0 6.0 1.7 98 chr3L 21994438 intergenic not near genes chr3L 21994487 intergenic not near genes chr3L 21994536 intergenic not near genes chr3L_12_21990001 chr3L_21990001 RAL-757 1588 chr3L 22033691 22033695 chr3L 22033769 22033773 5 78 12.0 7.5 9.8 0.5 82 chr3L 22033691 intergenic not near genes chr3L 22033732 intergenic not near genes chr3L 22033773 intergenic not near genes chr3L_5_22030001 chr3L_22030001 RAL-757 1589 chr3L 22033701 22033723 chr3L 22033768 22033791 14 75 4.5 7.0 5.8 2.1 90 chr3L 22033701 intergenic not near genes chr3L 22033746 intergenic not near genes chr3L 22033791 intergenic not near genes chr3L_14_22030001 chr3L_22030001 RAL-757 1590 chr3L 22046184 22046207 chr3L 22046287 22046309 14 101 11.5 9.0 10.2 1.2 125 chr3L 22046184 intron Oct-TyrR + chr3L 22046246 intron Oct-TyrR + chr3L 22046309 intron Oct-TyrR + chr3L_14_22045001 chr3L_22045001 RAL-757 1591 chr3L 22099684 22099708 chr3L 22105859 22105894 3S18 8 6182 3.5 5.0 4.2 1.5 6210 chr3L 22099684 intergenic not near genes chr3L 22102789 intergenic not near genes chr3L 22105894 intergenic not near genes chr3L_8_22100001 chr3L_22100001 RAL-757 1592 chr3L 22130502 22130521 chr3L 22130648 22130648 6 143 1.0 7.5 4.2 1.2 146 chr3L 22130502 intergenic not near genes chr3L 22130575 intergenic not near genes chr3L 22130648 intergenic not near genes chr3L_6_22130001 chr3L_22130001 RAL-757 1593 chr3L 22137663 22137690 chr3L 22137750 22137774 11 84 5.5 3.0 4.2 2.1 111 chr3L 22137663 intron olf413 + chr3L 22137718 intron olf413 + chr3L 22137774 intron olf413 + chr3L_11_22135001 chr3L_22135001 RAL-757 1594 chr3L 22328065 22328086 chr3L 22328163 22328165 6 94 5.0 0.0 2.5 1.7 100 chr3L 22328065 intron Ten-m - chr3L 22328115 intron Ten-m - chr3L 22328165 intron Ten-m - chr3L_6_22325001 chr3L_22325001 RAL-757 1595 chr3L 22447201 22447234 chr3L 22447287 22447325 23 87 3.5 5.0 4.2 4.4 124 chr3L 22447201 intergenic not near genes chr3L 22447263 intergenic not near genes chr3L 22447325 intergenic not near genes chr3L_23_22445001 chr3L_22445001 RAL-757 1596 chr3L 22555774 22555802 chr3L 22563239 22563241 blood 11 7453 6.5 2.0 4.2 2.1 7467 chr3L 22555774 intergenic not near genes chr3L 22559508 intergenic not near genes chr3L 22563241 intergenic not near genes chr3L_11_22555001 chr3L_22555001 RAL-757 1597 chr3L 22570424 22570456 chr3L 22570568 22570586 14 138 5.5 2.0 3.8 2.9 162 chr3L 22570424 intergenic not near genes chr3L 22570505 intergenic not near genes chr3L 22570586 intergenic not near genes chr3L_14_22570001 chr3L_22570001 RAL-757 1598 chr3L 22577622 22577650 chr3L 22582409 22582438 Doc 10 4783 1.5 5.0 3.2 2.4 4816 chr3L 22577622 intergenic not near genes chr3L 22580030 intergenic not near genes chr3L 22582438 3` UTR CG14459 - chr3L_10_22580001 chr3L_22580001 RAL-757 1599 chr3L 22617189 22617222 chr3L 22624641 22624672 blood 15 7447 5.5 3.0 4.2 2.9 7483 chr3L 22617189 intron CG14459 - chr3L 22620930 intron CG14459 - chr3L 22624672 intron CG14459 - chr3L_15_22620001 chr3L_22620001 RAL-757 1600 chr3L 22648472 22648499 chr3L 22649505 22649522 10 1029 4.5 3.5 4.0 2.0 1050 chr3L 22648472 exon CG33769 + chr3L 22648997 exon CG33770 + chr3L 22649522 intron CG33771 + chr3L_10_22645001 chr3L_22645001 RAL-757 1601 chr3L 22674444 22674465 chr3L 22674511 22674527 4 67 5.5 3.0 4.2 0.8 83 chr3L 22674444 intron CG14457 + chr3L 22674486 intron CG14457 + chr3L 22674527 intron CG14457 + chr3L_4_22670001 chr3L_22670001 RAL-757 1602 chr3L 22761387 22761416 chr3L 22766818 22766842 Ivk 19 5430 8.5 5.5 7.0 2.4 5455 chr3L 22761387 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766842 intron SPoCk + chr3L_19_22760001 chr3L_22760001 RAL-757 1603 chr3L 22761419 22761424 chr3L 22766817 22766822 Ivk 6 5413 6.5 5.5 6.0 0.9 5403 chr3L 22761419 intron SPoCk + chr3L 22764120 intron SPoCk + chr3L 22766822 intron SPoCk + chr3L_6_22760001 chr3L_22760001 RAL-757 1604 chr3L 22821946 22821958 chr3L 22822014 22822039 6 75 6.0 8.5 7.2 0.7 93 chr3L 22821946 intron jim - chr3L 22821992 intron jim - chr3L 22822039 intron jim - chr3L_6_22820001 chr3L_22820001 RAL-757 1605 chr3L 22853462 22853709 chr3L 22853549 22853795 16 85 4.0 7.0 5.5 2.5 333 chr3L 22853462 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853628 5` UTR CR43426 + chr3L 22853795 5` UTR CR43426 + chr3L_16_22850001 chr3L_22850001 RAL-757 1606 chr3L 22865994 22866016 chr3L 22867119 22867139 Doc 9 1129 4.5 9.5 7.0 1.1 1145 chr3L 22865994 intron CG33170 + chr3L 22866566 intron CG33170 + chr3L 22867139 intron CG33170 + chr3L_9_22865001 chr3L_22865001 RAL-757 1607 chr3L 22897204 22897226 chr3L 22897280 22897294 9 77 5.0 2.0 3.5 2.0 90 chr3L 22897204 intergenic not near genes chr3L 22897249 intergenic not near genes chr3L 22897294 intergenic not near genes chr3L_9_22895001 chr3L_22895001 RAL-757 1608 chr3L 22908066 22908066 chr3L 24821492 24821494 7 1913427 41.0 14.5 27.8 0.2 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_7_23860001 chr3L_23860001 RAL-757 1609 chr3L 20525229 20525230 chr3L 22908067 22908067 5 2382837 7.5 41.0 24.2 0.2 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_5_21715001 chr3L_21715001 RAL-757 1610 chr3L 22908067 22908067 chr3L 24821492 24821494 7 1913426 41.0 14.5 27.8 0.2 1913427 chr3L 22908067 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_7_23860001 chr3L_23860001 RAL-757 1611 chr3L 22989864 22989895 chr3L 22996838 22996869 297 8 6969 5.0 9.5 7.2 1.0 7005 chr3L 22989864 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996869 intergenic not near genes chr3L_8_22990001 chr3L_22990001 RAL-757 1612 chr3L 23042228 23042253 chr3L 23048978 23048988 gypsy6 6 6747 6.5 6.0 6.2 0.8 6760 chr3L 23042228 intergenic not near genes chr3L 23045608 intergenic not near genes chr3L 23048988 intergenic not near genes chr3L_6_23045001 chr3L_23045001 RAL-757 1613 chr3L 23088292 23088296 chr3L 23088374 23088378 4 82 3.5 6.5 5.0 0.7 86 chr3L 23088292 intergenic not near genes chr3L 23088335 intergenic not near genes chr3L 23088378 intergenic not near genes chr3L_4_23085001 chr3L_23085001 RAL-757 1614 chr3L 23088299 23088313 chr3L 23088372 23088392 8 78 2.0 6.5 4.2 1.5 93 chr3L 23088299 intergenic not near genes chr3L 23088346 intergenic not near genes chr3L 23088392 intergenic not near genes chr3L_8_23085001 chr3L_23085001 RAL-757 1615 chr3L 23182274 23182289 chr3L 23182373 23182401 12 108 7.5 4.5 6.0 1.7 127 chr3L 23182274 intron CG34031 + chr3L 23182338 intron CG34031 + chr3L 23182401 intron CG34031 + chr3L_12_23180001 chr3L_23180001 RAL-757 1616 chr3L 23875526 23875558 chr3L 23875607 23875622 7 77 4.5 12.0 8.2 0.8 96 chr3L 23875526 intron CG40470 - chr3L 23875574 intron CG40470 - chr3L 23875622 intron CG40470 - chr3L_7_23875001 chr3L_23875001 RAL-757 1617 chr3L 24012417 24012427 chr3L 24020751 24020765 roo 6 8339 6.0 4.0 5.0 1.0 8348 chr3L 24012417 intergenic not near genes chr3L 24016591 intergenic not near genes chr3L 24020765 intergenic not near genes chr3L_6_24015001 chr3L_24015001 RAL-757 1618 chr3L 24168644 24168653 chr3L 24176405 24176413 ZAM 4 7760 3.5 8.0 5.8 0.6 7769 chr3L 24168644 intron Snap25 + chr3L 24172528 intron Snap25 + chr3L 24176413 intron Snap25 + chr3L_4_24170001 chr3L_24170001 RAL-757 1619 chr3L 18198930 18198930 chr3L 24821492 24821492 6 6622562 0.0 14.5 7.2 0.7 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-757 1620 chr3L 20525229 20525230 chr3L 24821492 24821492 5 4296263 7.5 14.5 11.0 0.4 4296263 chr3L 20525229 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-757 1621 chr3L 18198931 18198931 chr3L 24821493 24821493 7 6622562 0.0 14.5 7.2 0.9 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-757 1622 chr3L 20525229 20525230 chr3L 24821493 24821493 7 4296263 7.5 14.5 11.0 0.6 4296264 chr3L 20525229 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_7_22670001 chr3L_22670001 RAL-757 1623 chr3L 18198930 18198931 chr3L 24821494 24821494 4 6622563 0.0 14.5 7.2 0.5 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-757 1624 chr3L 20525228 20525231 chr3L 24821494 24821494 5 4296265 7.5 14.5 11.0 0.4 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-757 1625 chr3L 25635711 25635746 chr3L 25635983 25636003 17 268 5.0 6.0 5.5 2.6 292 chr3L 25635711 intron CG41343 - chr3L 25635857 intron CG41343 - chr3L 25636003 intron CG41343 - chr3L_17_25635001 chr3L_25635001 RAL-757 1626 chr3L 23289004 23289018 chr3L 25843685 25843699 10 2554683 36.0 30.0 33.0 0.3 2554695 chr3L 23289004 intergenic not near genes chr3L 24566352 intergenic not near genes chr3L 25843699 intron CG40178 - chr3L_10_24565001 chr3L_24565001 RAL-757 1627 chr3L 25975451 25975466 chr3L 25975536 25975538 4 81 6.0 8.0 7.0 0.5 87 chr3L 25975451 intron CG40178 - chr3L 25975494 intron CG40178 - chr3L 25975538 intron CG40178 - chr3L_4_25975001 chr3L_25975001 RAL-757 1628 chr3L 26008763 26008794 chr3L 26008910 26008934 15 141 6.5 3.5 5.0 2.5 171 chr3L 26008763 intron CG40178 - chr3L 26008848 intron CG40178 - chr3L 26008934 intron CG40178 - chr3L_15_26005001 chr3L_26005001 RAL-757 1629 chr3L 26029458 26029465 chr3L 26030176 26030183 G3 4 718 0.0 0.0 0.0 4.0 725 chr3L 26029458 intergenic not near genes chr3L 26029820 intergenic not near genes chr3L 26030183 intergenic not near genes chr3L_4_26025001 chr3L_26025001 RAL-757 1630 chr3L 26717671 26717690 chr3L 26717747 26717766 5 76 3.5 3.5 3.5 1.1 95 chr3L 26717671 intergenic not near genes chr3L 26717718 intergenic not near genes chr3L 26717766 intergenic not near genes chr3L_5_26715001 chr3L_26715001 RAL-757 1631 chr3L 27660772 27660791 chr3L 27660853 27660871 7 78 10.0 13.5 11.8 0.5 99 chr3L 27660772 intergenic not near genes chr3L 27660822 intergenic not near genes chr3L 27660871 intergenic not near genes chr3L_7_27660001 chr3L_27660001 RAL-757 1632 chr3L 27660794 27660798 chr3L 27660849 27660878 5 74 9.0 11.0 10.0 0.5 84 chr3L 27660794 intergenic not near genes chr3L 27660836 intergenic not near genes chr3L 27660878 intergenic not near genes chr3L_5_27660001 chr3L_27660001 RAL-757 1633 chr3R 1446691 1446703 chr3R 2999472 2999478 invader2 4 1552779 11.0 10.5 10.8 0.3 1552787 chr3R 1446691 intron CG40155 + chr3R 2223084 intergenic not near genes chr3R 2999478 intron CG42618 - chr3R_4_2220001 chr3R_2220001 RAL-757 1634 chr3R 1938333 1938366 chr3R 1938415 1938431 5 78 0.0 2.5 1.2 2.3 98 chr3R 1938333 intergenic CG42623 + chr3R 1938382 intergenic CG42623 + chr3R 1938431 intergenic CG42623 + chr3R_5_1935001 chr3R_1935001 RAL-757 1635 chr3R 2446797 2446815 chr3R 2449046 2449066 1360 4 2250 31.0 68.5 49.8 0.1 2269 chr3R 2446797 intergenic not near genes chr3R 2447932 intergenic not near genes chr3R 2449066 intergenic not near genes chr3R_4_2445001 chr3R_2445001 RAL-757 1636 chr3R 2534158 2534162 chr3R 2541700 2541731 4 7549 15.0 14.0 14.5 0.3 7573 chr3R 2534158 intergenic not near genes chr3R 2537944 intergenic not near genes chr3R 2541731 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-757 1637 chr3R 2556880 2556906 chr3R 2557613 2557639 9 736 35.0 24.0 29.5 0.3 759 chr3R 2556880 intron CG41056 - chr3R 2557260 intron CG41056 - chr3R 2557639 intron CG41056 - chr3R_9_2555001 chr3R_2555001 RAL-757 1638 chr3R 4063814 4063834 chr3R 4069091 4069102 5 5276 8.0 13.0 10.5 0.4 5288 chr3R 4063814 intergenic not near genes chr3R 4066458 intergenic not near genes chr3R 4069102 intergenic not near genes chr3R_5_4065001 chr3R_4065001 RAL-757 1639 chr3R 4105037 4105069 chr3R 4110241 4110273 copia 6 5204 3.5 3.0 3.2 1.4 5236 chr3R 4105037 intergenic not near genes chr3R 4107655 intergenic not near genes chr3R 4110273 intergenic not near genes chr3R_6_4105001 chr3R_4105001 RAL-757 1640 chr3R 4132901 4132931 chr3R 4133055 4133076 18 151 3.0 2.0 2.5 5.1 175 chr3R 4132901 5` UTR Gfat1 + chr3R 4132988 intron Gfat1 + chr3R 4133076 intron Gfat1 + chr3R_18_4130001 chr3R_4130001 RAL-757 1641 chr3R 4160229 4160231 chr3R 14983775 14983777 9 10823546 21.5 26.0 23.8 0.4 10823548 chr3R 4160229 intergenic CG40198 - chr3R 9572003 3` UTR CG9399 - chr3R 14983777 intergenic not near genes chr3R_9_9570001 chr3R_9570001 RAL-757 1642 chr3R 4206075 4206104 chr3R 4211644 4211654 mdg3 15 5567 4.0 4.0 4.0 3.0 5579 chr3R 4206075 intron CG14636 - chr3R 4208864 intron CG14636 - chr3R 4211654 intron CG14636 - chr3R_15_4205001 chr3R_4205001 RAL-757 1643 chr3R 4366760 4366791 chr3R 4375138 4375174 roo 19 8378 5.0 2.0 3.5 4.2 8414 chr3R 4366760 3` UTR CG1090 + chr3R 4370967 intergenic not near genes chr3R 4375174 5` UTR CR44922 + chr3R_19_4370001 chr3R_4370001 RAL-757 1644 chr3R 4408411 4408443 chr3R 4412715 4412740 Juan 16 4299 15.0 11.5 13.2 1.1 4329 chr3R 4408411 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412740 intron CG32944 - chr3R_16_4410001 chr3R_4410001 RAL-757 1645 chr3R 4599300 4599327 chr3R 4599384 4599411 7 84 2.0 7.5 4.8 1.2 111 chr3R 4599300 intron CR44317 - chr3R 4599356 intron CR44317 - chr3R 4599411 intron CR44317 - chr3R_7_4595001 chr3R_4595001 RAL-757 1646 chr3R 4604269 4604291 chr3R 4604419 4604426 14 150 2.0 6.5 4.2 2.7 157 chr3R 4604269 intergenic not near genes chr3R 4604348 intergenic not near genes chr3R 4604426 intergenic not near genes chr3R_14_4600001 chr3R_4600001 RAL-757 1647 chr3R 4730035 4730069 chr3R 4730133 4730136 12 95 3.0 7.5 5.2 1.9 101 chr3R 4730035 intron Nep2 - chr3R 4730086 intron Nep2 - chr3R 4730136 intron Nep2 - chr3R_12_4730001 chr3R_4730001 RAL-757 1648 chr3R 4769161 4769191 chr3R 4769238 4769250 12 76 5.0 6.0 5.5 1.8 89 chr3R 4769161 intron,intron atms +,CG44098 - chr3R 4769206 intron,intron atms +,CG44098 - chr3R 4769250 intron,intron atms +,CG44098 - chr3R_12_4765001 chr3R_4765001 RAL-757 1649 chr3R 4785633 4785664 chr3R 4785708 4785739 7 68 4.5 3.0 3.8 1.5 106 chr3R 4785633 intergenic not near genes chr3R 4785686 intergenic not near genes chr3R 4785739 intergenic not near genes chr3R_7_4785001 chr3R_4785001 RAL-757 1650 chr3R 4861573 4861593 chr3R 4861647 4861673 4 73 5.0 3.5 4.2 0.8 100 chr3R 4861573 intron opa + chr3R 4861623 intron opa + chr3R 4861673 intron opa + chr3R_4_4860001 chr3R_4860001 RAL-757 1651 chr3R 4887487 4887506 chr3R 4894864 4894881 rover 4 7376 3.5 5.0 4.2 0.8 7394 chr3R 4887487 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894881 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-757 1652 chr3R 4922341 4922363 chr3R 4922420 4922441 9 77 4.5 2.0 3.2 2.1 100 chr3R 4922341 intron Cdep + chr3R 4922391 intron Cdep + chr3R 4922441 intron Cdep + chr3R_9_4920001 chr3R_4920001 RAL-757 1653 chr3R 4966007 4966037 chr3R 4966099 4966118 14 90 5.0 1.0 3.0 3.5 111 chr3R 4966007 intron CG1124 + chr3R 4966062 intron CG1124 + chr3R 4966118 intron CG1124 + chr3R_14_4965001 chr3R_4965001 RAL-757 1654 chr3R 5018193 5018215 chr3R 5018269 5018283 9 74 4.0 4.5 4.2 1.7 90 chr3R 5018193 intron CR45585 + chr3R 5018238 intron CR45585 + chr3R 5018283 intron CR45585 + chr3R_9_5015001 chr3R_5015001 RAL-757 1655 chr3R 5045843 5045873 chr3R 5052945 5052974 HMS-Beagle 10 7100 7.5 7.0 7.2 1.2 7131 chr3R 5045843 intron CR43635 - chr3R 5049408 intergenic not near genes chr3R 5052974 intergenic CR45588 - chr3R_10_5045001 chr3R_5045001 RAL-757 1656 chr3R 5067981 5067995 chr3R 5073498 5073512 mdg3 8 5514 12.5 8.0 10.2 0.7 5531 chr3R 5067981 intergenic not near genes chr3R 5070746 intergenic not near genes chr3R 5073512 intergenic not near genes chr3R_8_5070001 chr3R_5070001 RAL-757 1657 chr3R 5068002 5068013 chr3R 5073497 5073530 mdg3 6 5508 6.5 7.5 7.0 0.8 5528 chr3R 5068002 intergenic not near genes chr3R 5070766 intergenic not near genes chr3R 5073530 intergenic not near genes chr3R_6_5070001 chr3R_5070001 RAL-757 1658 chr3R 5158143 5158174 chr3R 5158236 5158267 13 92 3.5 2.5 3.0 3.2 124 chr3R 5158143 intron dpr16 + chr3R 5158205 intron dpr16 + chr3R 5158267 intron dpr16 + chr3R_13_5155001 chr3R_5155001 RAL-757 1659 chr3R 5162946 5162968 chr3R 5163089 5163119 6 148 4.0 7.0 5.5 0.9 173 chr3R 5162946 intron dpr16 + chr3R 5163032 intron dpr16 + chr3R 5163119 intron dpr16 + chr3R_6_5160001 chr3R_5160001 RAL-757 1660 chr3R 5338404 5338422 chr3R 5343574 5343594 Rt1c 9 5170 7.0 6.5 6.8 1.2 5190 chr3R 5338404 intron mtd - chr3R 5340999 intron mtd - chr3R 5343594 intron mtd - chr3R_9_5340001 chr3R_5340001 RAL-757 1661 chr3R 5338426 5338429 chr3R 5343572 5343605 Rt1c 5 5168 5.5 6.0 5.8 0.7 5179 chr3R 5338426 intron mtd - chr3R 5341016 intron mtd - chr3R 5343605 intron mtd - chr3R_5_5340001 chr3R_5340001 RAL-757 1662 chr3R 5351903 5351914 chr3R 5352905 5352930 11 1001 33.5 36.5 35.0 0.3 1027 chr3R 5351903 intergenic not near genes chr3R 5352416 intergenic not near genes chr3R 5352930 intergenic not near genes chr3R_11_5350001 chr3R_5350001 RAL-757 1663 chr3R 5385977 5386005 chr3R 5386145 5386167 12 170 1.0 5.5 3.2 2.9 190 chr3R 5385977 intron kkv - chr3R 5386072 intron kkv - chr3R 5386167 intron kkv - chr3R_12_5385001 chr3R_5385001 RAL-757 1664 chr3R 5445959 5445993 chr3R 5452419 5452453 Burdock 10 6458 5.0 6.0 5.5 1.5 6494 chr3R 5445959 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452453 intron CG14669 + chr3R_10_5445001 chr3R_5445001 RAL-757 1665 chr3R 5627147 5627181 chr3R 5627558 5627592 10 406 1.5 5.5 3.5 2.2 445 chr3R 5627147 intergenic not near genes chr3R 5627370 intergenic CG31551 + chr3R 5627592 intergenic CG31551 + chr3R_10_5625001 chr3R_5625001 RAL-757 1666 chr3R 5696131 5696145 chr3R 5696227 5696241 6 95 2.5 5.0 3.8 1.2 110 chr3R 5696131 intron plx + chr3R 5696186 intron plx + chr3R 5696241 intron plx + chr3R_6_5695001 chr3R_5695001 RAL-757 1667 chr3R 5734648 5734683 chr3R 5734737 5734772 14 88 5.5 4.0 4.8 2.4 124 chr3R 5734648 exon CG1239 + chr3R 5734710 3` UTR CG2100 - chr3R 5734772 exon CG2100 - chr3R_14_5730001 chr3R_5730001 RAL-757 1668 chr3R 5746013 5746044 chr3R 5746254 5746285 pogo 12 238 5.0 2.5 3.8 2.5 272 chr3R 5746013 3` UTR Madm + chr3R 5746149 3` UTR Madm + chr3R 5746285 3` UTR Madm + chr3R_12_5745001 chr3R_5745001 RAL-757 1669 chr3R 5747010 5747049 chr3R 5753201 5753233 diver 26 6184 3.5 4.0 3.8 5.4 6223 chr3R 5747010 intergenic Madm + chr3R 5750122 intergenic not near genes chr3R 5753233 intergenic CG2091 - chr3R_26_5750001 chr3R_5750001 RAL-757 1670 chr3R 5809119 5809144 chr3R 5809353 5809385 pogo 10 238 5.5 6.5 6.0 1.4 266 chr3R 5809119 3` UTR CG11000 + chr3R 5809252 3` UTR CG11000 + chr3R 5809385 3` UTR CG11000 + chr3R_10_5805001 chr3R_5805001 RAL-757 1671 chr3R 5927565 5927591 chr3R 5927800 5927823 pogo 13 235 10.0 5.5 7.8 1.5 258 chr3R 5927565 intron CG34113 - chr3R 5927694 intron CG34113 - chr3R 5927823 intron CG34113 - chr3R_13_5925001 chr3R_5925001 RAL-757 1672 chr3R 5931860 5931882 chr3R 5931928 5931958 5 72 4.5 4.0 4.2 1.0 98 chr3R 5931860 intron CG34113 - chr3R 5931909 intron CG34113 - chr3R 5931958 intron CG34113 - chr3R_5_5930001 chr3R_5930001 RAL-757 1673 chr3R 5989336 5989368 chr3R 5989417 5989451 6 79 2.0 3.5 2.8 1.6 115 chr3R 5989336 5` UTR CR44927 + chr3R 5989394 5` UTR CR44927 + chr3R 5989451 5` UTR CR44927 + chr3R_6_5985001 chr3R_5985001 RAL-757 1674 chr3R 6014434 6014457 chr3R 6014520 6014543 14 80 4.0 4.5 4.2 2.7 109 chr3R 6014434 intergenic not near genes chr3R 6014488 intergenic not near genes chr3R 6014543 intergenic not near genes chr3R_14_6010001 chr3R_6010001 RAL-757 1675 chr3R 6015964 6015994 chr3R 6024444 6024455 Tirant 7 8474 2.0 8.0 5.0 1.2 8491 chr3R 6015964 intergenic not near genes chr3R 6020210 intergenic not near genes chr3R 6024455 intergenic not near genes chr3R_7_6020001 chr3R_6020001 RAL-757 1676 chr3R 6029971 6029985 chr3R 6030167 6030186 9 200 3.0 6.0 4.5 1.6 215 chr3R 6029971 intergenic not near genes chr3R 6030078 intergenic not near genes chr3R 6030186 intergenic not near genes chr3R_9_6030001 chr3R_6030001 RAL-757 1677 chr3R 6117416 6117440 chr3R 6117533 6117541 6 112 3.5 9.0 6.2 0.8 125 chr3R 6117416 intergenic not near genes chr3R 6117478 intergenic not near genes chr3R 6117541 intergenic not near genes chr3R_6_6115001 chr3R_6115001 RAL-757 1678 chr3R 6121164 6121186 chr3R 6121382 6121404 BS 8 216 0.0 6.0 3.0 2.0 240 chr3R 6121164 intergenic not near genes chr3R 6121284 intergenic not near genes chr3R 6121404 intergenic not near genes chr3R_8_6120001 chr3R_6120001 RAL-757 1679 chr3R 6158082 6158092 chr3R 6158289 6158303 7 212 4.0 3.5 3.8 1.5 221 chr3R 6158082 intergenic not near genes chr3R 6158192 intergenic not near genes chr3R 6158303 intergenic not near genes chr3R_7_6155001 chr3R_6155001 RAL-757 1680 chr3R 6158095 6158105 chr3R 6158287 6158298 7 205 2.5 3.5 3.0 1.8 203 chr3R 6158095 intergenic not near genes chr3R 6158196 intergenic not near genes chr3R 6158298 intergenic not near genes chr3R_7_6155001 chr3R_6155001 RAL-757 1681 chr3R 6175176 6175206 chr3R 6182447 6182468 HMS-Beagle2 16 7268 7.0 3.5 5.2 2.6 7292 chr3R 6175176 intergenic Osi1 + chr3R 6178822 intron CR45194 + chr3R 6182468 intergenic CR45194 + chr3R_16_6175001 chr3R_6175001 RAL-757 1682 chr3R 6191194 6191200 chr3R 6191251 6191280 5 69 2.5 2.5 2.5 1.4 86 chr3R 6191194 intron NPFR + chr3R 6191237 intron NPFR + chr3R 6191280 intron NPFR + chr3R_5_6190001 chr3R_6190001 RAL-757 1683 chr3R 6197640 6197669 chr3R 6198188 6198211 9 543 3.5 6.0 4.8 1.6 571 chr3R 6197640 intergenic not near genes chr3R 6197926 intergenic not near genes chr3R 6198211 intergenic not near genes chr3R_9_6195001 chr3R_6195001 RAL-757 1684 chr3R 6206280 6206317 chr3R 6206497 6206532 BS 15 212 5.5 5.0 5.2 2.4 252 chr3R 6206280 exon Osi24 + chr3R 6206406 intron Osi24 + chr3R 6206532 intron Osi24 + chr3R_15_6205001 chr3R_6205001 RAL-757 1685 chr3R 6428814 6428845 chr3R 6428910 6428947 16 99 4.5 7.0 5.8 2.4 133 chr3R 6428814 intron gpp + chr3R 6428880 intron gpp + chr3R 6428947 intron gpp + chr3R_16_6425001 chr3R_6425001 RAL-757 1686 chr3R 6461596 6461611 chr3R 6461660 6461691 6 76 2.0 3.5 2.8 1.6 95 chr3R 6461596 intergenic not near genes chr3R 6461644 intergenic not near genes chr3R 6461691 intergenic not near genes chr3R_6_6460001 chr3R_6460001 RAL-757 1687 chr3R 6473414 6473442 chr3R 6473492 6473522 10 76 8.5 6.5 7.5 1.2 108 chr3R 6473414 intergenic not near genes chr3R 6473468 intergenic not near genes chr3R 6473522 intergenic not near genes chr3R_10_6470001 chr3R_6470001 RAL-757 1688 chr3R 6510023 6510059 chr3R 6515103 6515115 jockey 16 5076 5.5 6.5 6.0 2.3 5092 chr3R 6510023 intergenic not near genes chr3R 6512569 intergenic not near genes chr3R 6515115 intergenic not near genes chr3R_16_6510001 chr3R_6510001 RAL-757 1689 chr3R 6598323 6598357 chr3R 6598406 6598440 21 81 2.0 5.5 3.8 4.4 117 chr3R 6598323 intergenic CG1138 - chr3R 6598382 intergenic CG1138 - chr3R 6598440 intergenic CG1138 - chr3R_21_6595001 chr3R_6595001 RAL-757 1690 chr3R 6624265 6624275 chr3R 6624347 6624357 6 82 6.0 6.5 6.2 0.8 92 chr3R 6624265 intergenic not near genes chr3R 6624311 intergenic not near genes chr3R 6624357 intergenic not near genes chr3R_6_6620001 chr3R_6620001 RAL-757 1691 chr3R 6639911 6639933 chr3R 6639989 6639990 8 72 9.0 0.0 4.5 1.5 79 chr3R 6639911 intergenic not near genes chr3R 6639950 intergenic not near genes chr3R 6639990 intergenic not near genes chr3R_8_6635001 chr3R_6635001 RAL-757 1692 chr3R 6705685 6705719 chr3R 6705908 6705943 14 223 3.0 3.5 3.2 3.3 258 chr3R 6705685 intergenic not near genes chr3R 6705814 intergenic not near genes chr3R 6705943 intergenic not near genes chr3R_14_6705001 chr3R_6705001 RAL-757 1693 chr3R 6737504 6737529 chr3R 6739284 6739314 Doc 11 1784 4.0 5.5 4.8 1.9 1810 chr3R 6737504 intron pb - chr3R 6738409 intron pb - chr3R 6739314 intron pb - chr3R_11_6735001 chr3R_6735001 RAL-757 1694 chr3R 6842785 6842810 chr3R 6842858 6842875 12 77 4.0 1.0 2.5 3.4 90 chr3R 6842785 intron Scr - chr3R 6842830 intron Scr - chr3R 6842875 intron Scr - chr3R_12_6840001 chr3R_6840001 RAL-757 1695 chr3R 6856384 6856398 chr3R 6856501 6856515 5 115 2.0 3.5 2.8 1.3 131 chr3R 6856384 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856515 intergenic not near genes chr3R_5_6855001 chr3R_6855001 RAL-757 1696 chr3R 6918060 6918090 chr3R 6918138 6918168 7 78 2.0 2.0 2.0 2.3 108 chr3R 6918060 intron Antp - chr3R 6918114 intron Antp - chr3R 6918168 intron Antp - chr3R_7_6915001 chr3R_6915001 RAL-757 1697 chr3R 6988814 6988844 chr3R 6988934 6988955 12 119 2.5 7.5 5.0 2.0 141 chr3R 6988814 intron Antp - chr3R 6988884 intron Antp - chr3R 6988955 intron Antp - chr3R_12_6985001 chr3R_6985001 RAL-757 1698 chr3R 7103295 7103308 chr3R 7103371 7103382 7 75 9.0 14.0 11.5 0.6 87 chr3R 7103295 intron Alh - chr3R 7103338 intron Alh - chr3R 7103382 intron Alh - chr3R_7_7100001 chr3R_7100001 RAL-757 1699 chr3R 7103313 7103319 chr3R 7103366 7103391 4 67 6.0 11.0 8.5 0.4 78 chr3R 7103313 intron Alh - chr3R 7103352 intron Alh - chr3R 7103391 intron Alh - chr3R_4_7100001 chr3R_7100001 RAL-757 1700 chr3R 7126504 7126533 chr3R 7126599 7126628 23 93 4.5 6.0 5.2 3.7 124 chr3R 7126504 3` UTR CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126628 3` UTR CG10068 - chr3R_23_7125001 chr3R_7125001 RAL-757 1701 chr3R 7173687 7173710 chr3R 7173767 7173790 5 75 4.0 8.0 6.0 0.7 103 chr3R 7173687 intron sas + chr3R 7173738 intron sas + chr3R 7173790 intron sas + chr3R_5_7170001 chr3R_7170001 RAL-757 1702 chr3R 7447991 7448012 chr3R 7448068 7448090 14 76 5.5 8.0 6.8 1.8 99 chr3R 7447991 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448090 intergenic not near genes chr3R_14_7445001 chr3R_7445001 RAL-757 1703 chr3R 7639789 7639803 chr3R 7639930 7639934 7 138 6.0 8.5 7.2 0.9 145 chr3R 7639789 intergenic CG34127 - chr3R 7639862 intergenic CG34127 - chr3R 7639934 intergenic CG34127 - chr3R_7_7635001 chr3R_7635001 RAL-757 1704 chr3R 7639808 7639819 chr3R 7639925 7639935 8 124 1.5 7.0 4.2 1.5 127 chr3R 7639808 intergenic CG34127 - chr3R 7639872 intergenic CG34127 - chr3R 7639935 intergenic not near genes chr3R_8_7635001 chr3R_7635001 RAL-757 1705 chr3R 7677927 7677940 chr3R 7678033 7678033 9 108 2.5 6.0 4.2 1.7 106 chr3R 7677927 intron Nlg1 + chr3R 7677980 intron Nlg1 + chr3R 7678033 intron Nlg1 + chr3R_9_7675001 chr3R_7675001 RAL-757 1706 chr3R 7694575 7694610 chr3R 7713636 7713671 invader3 14 19059 4.5 7.5 6.0 2.0 19096 chr3R 7694575 3` UTR Nlg1 + chr3R 7704123 intergenic not near genes chr3R 7713671 intergenic not near genes chr3R_14_7700001 chr3R_7700001 RAL-757 1707 chr3R 7726154 7726190 chr3R 7726231 7726267 11 74 4.0 3.5 3.8 2.3 113 chr3R 7726154 intergenic not near genes chr3R 7726210 intergenic not near genes chr3R 7726267 intergenic not near genes chr3R_11_7725001 chr3R_7725001 RAL-757 1708 chr3R 7729467 7729486 chr3R 7737405 7737422 Stalker2 7 7937 9.0 8.0 8.5 0.7 7955 chr3R 7729467 intergenic not near genes chr3R 7733444 intergenic not near genes chr3R 7737422 intergenic not near genes chr3R_7_7730001 chr3R_7730001 RAL-757 1709 chr3R 7884679 7884693 chr3R 7884751 7884756 4 68 7.5 2.5 5.0 0.7 77 chr3R 7884679 intron CG17816 - chr3R 7884718 intron CG17816 - chr3R 7884756 intron CG17816 - chr3R_4_7880001 chr3R_7880001 RAL-757 1710 chr3R 7973318 7973345 chr3R 7974374 7974405 1360 18 1060 7.0 9.0 8.0 2.0 1087 chr3R 7973318 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974405 intergenic CD98hc - chr3R_18_7970001 chr3R_7970001 RAL-757 1711 chr3R 8049052 8049055 chr3R 8049625 8049628 4 573 14.0 5.0 9.5 0.4 576 chr3R 8049052 intron CG43060 + chr3R 8049340 intron,intron CG43060 +,CG43618 + chr3R 8049628 intron CG43060 + chr3R_4_8045001 chr3R_8045001 RAL-757 1712 chr3R 8049057 8049061 chr3R 8049623 8049635 4 572 12.5 4.5 8.5 0.4 578 chr3R 8049057 intron CG43060 + chr3R 8049346 intron,intron CG43060 +,CG43618 + chr3R 8049635 intron CG43060 + chr3R_4_8045001 chr3R_8045001 RAL-757 1713 chr3R 8090270 8090295 chr3R 8090447 8090472 16 174 6.5 6.0 6.2 2.2 202 chr3R 8090270 5` UTR CR44330 + chr3R 8090371 intergenic CR44330 + chr3R 8090472 intergenic CR44330 + chr3R_16_8090001 chr3R_8090001 RAL-757 1714 chr3R 8094407 8094424 chr3R 8099712 8099729 Transpac 11 5304 9.5 5.0 7.2 1.3 5322 chr3R 8094407 intron CG7900 + chr3R 8097068 intron CG7900 + chr3R 8099729 intron CG7900 + chr3R_11_8095001 chr3R_8095001 RAL-757 1715 chr3R 8094426 8094433 chr3R 8099711 8099738 Transpac 9 5299 8.0 5.0 6.5 1.2 5312 chr3R 8094426 intron CG7900 + chr3R 8097082 intron CG7900 + chr3R 8099738 intron CG7900 + chr3R_9_8095001 chr3R_8095001 RAL-757 1716 chr3R 8101763 8101793 chr3R 8104847 8104873 G2 7 3082 4.5 7.0 5.8 1.0 3110 chr3R 8101763 exon CG7900 + chr3R 8103318 intron CG7900 + chr3R 8104873 3` UTR CG7900 + chr3R_7_8100001 chr3R_8100001 RAL-757 1717 chr3R 8107395 8107420 chr3R 8107523 8107536 12 129 5.0 7.0 6.0 1.7 141 chr3R 8107395 intron puc + chr3R 8107466 intron puc + chr3R 8107536 intron puc + chr3R_12_8105001 chr3R_8105001 RAL-757 1718 chr3R 8207561 8207589 chr3R 8208402 8208407 F-element 6 836 3.5 7.0 5.2 1.0 846 chr3R 8207561 intergenic not near genes chr3R 8207984 intergenic not near genes chr3R 8208407 intergenic not near genes chr3R_6_8205001 chr3R_8205001 RAL-757 1719 chr3R 8339246 8339247 chr3R 21907534 21907536 11 13568288 32.0 29.5 30.8 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_11_15120001 chr3R_15120001 RAL-757 1720 chr3R 8403008 8403041 chr3R 8412174 8412189 roo 8 9163 1.0 2.5 1.8 2.9 9181 chr3R 8403008 intron CG45263 - chr3R 8407598 intron CG45263 - chr3R 8412189 intron CG45263 - chr3R_8_8405001 chr3R_8405001 RAL-757 1721 chr3R 8432490 8432495 chr3R 8432896 8432901 4 406 6.5 4.0 5.2 0.6 411 chr3R 8432490 intron CG45263 - chr3R 8432696 intron CG45263 - chr3R 8432901 intron CG45263 - chr3R_4_8430001 chr3R_8430001 RAL-757 1722 chr3R 8570478 8570509 chr3R 8575114 8575142 HMS-Beagle 14 4633 4.5 7.0 5.8 2.1 4664 chr3R 8570478 intergenic not near genes chr3R 8572810 intergenic not near genes chr3R 8575142 intergenic not near genes chr3R_14_8570001 chr3R_8570001 RAL-757 1723 chr3R 8581720 8581752 chr3R 8581976 8581998 16 251 7.0 4.5 5.8 2.4 278 chr3R 8581720 intron 5-HT2B + chr3R 8581859 intron 5-HT2B + chr3R 8581998 intron 5-HT2B + chr3R_16_8580001 chr3R_8580001 RAL-757 1724 chr3R 8601766 8601800 chr3R 8610919 8610923 roo 13 9145 6.0 5.0 5.5 2.0 9157 chr3R 8601766 intron 5-HT2B + chr3R 8606344 intron 5-HT2B + chr3R 8610923 intron 5-HT2B + chr3R_13_8605001 chr3R_8605001 RAL-757 1725 chr3R 8707364 8707382 chr3R 8709796 8709822 jockey 9 2438 5.0 8.5 6.8 1.2 2458 chr3R 8707364 intergenic not near genes chr3R 8708593 intergenic not near genes chr3R 8709822 intergenic not near genes chr3R_9_8705001 chr3R_8705001 RAL-757 1726 chr3R 8798653 8798669 chr3R 8798735 8798738 4 79 4.0 5.5 4.8 0.7 85 chr3R 8798653 intron,intron Pif1A -,Pif1B - chr3R 8798696 intron,intron Pif1A -,Pif1B - chr3R 8798738 intron,intron Pif1A -,Pif1B - chr3R_4_8795001 chr3R_8795001 RAL-757 1727 chr3R 8798671 8798686 chr3R 8798732 8798769 8 76 1.0 4.0 2.5 2.3 98 chr3R 8798671 intron,intron Pif1A -,Pif1B - chr3R 8798720 intron,intron Pif1A -,Pif1B - chr3R 8798769 intron,intron Pif1A -,Pif1B - chr3R_8_8795001 chr3R_8795001 RAL-757 1728 chr3R 9025658 9025691 chr3R 9025745 9025768 9 84 2.0 3.0 2.5 2.6 110 chr3R 9025658 intron neur - chr3R 9025713 intron neur - chr3R 9025768 intron neur - chr3R_9_9025001 chr3R_9025001 RAL-757 1729 chr3R 9036711 9036746 chr3R 9036807 9036827 14 94 0.0 5.0 2.5 4.0 116 chr3R 9036711 intron neur - chr3R 9036769 intron neur - chr3R 9036827 intron neur - chr3R_14_9035001 chr3R_9035001 RAL-757 1730 chr3R 9095288 9095320 chr3R 9095375 9095407 17 87 6.0 6.5 6.2 2.4 119 chr3R 9095288 intron pum - chr3R 9095348 intron pum - chr3R 9095407 intron pum - chr3R_17_9095001 chr3R_9095001 RAL-757 1731 chr3R 9108870 9108882 chr3R 9108946 9108952 7 73 7.5 0.0 3.8 1.5 82 chr3R 9108870 intron pum - chr3R 9108911 intron pum - chr3R 9108952 intron pum - chr3R_7_9105001 chr3R_9105001 RAL-757 1732 chr3R 9141168 9141186 chr3R 9141257 9141271 7 88 9.5 8.5 9.0 0.7 103 chr3R 9141168 intron pum - chr3R 9141220 intron pum - chr3R 9141271 intron pum - chr3R_7_9140001 chr3R_9140001 RAL-757 1733 chr3R 9156797 9156826 chr3R 9156890 9156916 19 92 4.5 5.0 4.8 3.3 119 chr3R 9156797 intron pum - chr3R 9156856 intron pum - chr3R 9156916 intron pum - chr3R_19_9155001 chr3R_9155001 RAL-757 1734 chr3R 9278778 9278807 chr3R 9284038 9284067 Rt1a 15 5259 8.5 5.0 6.8 1.9 5289 chr3R 9278778 intergenic not near genes chr3R 9281422 intergenic not near genes chr3R 9284067 intergenic not near genes chr3R_15_9280001 chr3R_9280001 RAL-757 1735 chr3R 9284875 9284913 chr3R 9284957 9284996 14 81 2.5 4.5 3.5 3.1 121 chr3R 9284875 intergenic not near genes chr3R 9284936 intergenic not near genes chr3R 9284996 intergenic not near genes chr3R_14_9280001 chr3R_9280001 RAL-757 1736 chr3R 9319586 9319609 chr3R 9320007 9320044 jockey 18 426 4.5 4.0 4.2 3.5 458 chr3R 9319586 intron CG8861 - chr3R 9319815 intron CG8861 - chr3R 9320044 intron CG8861 - chr3R_18_9315001 chr3R_9315001 RAL-757 1737 chr3R 9324369 9324391 chr3R 9324672 9324684 4 300 6.0 2.5 4.2 0.8 315 chr3R 9324369 intron CG8861 - chr3R 9324526 intron CG8861 - chr3R 9324684 intron CG8861 - chr3R_4_9320001 chr3R_9320001 RAL-757 1738 chr3R 9361814 9361847 chr3R 9362055 9362088 pogo 11 241 9.0 5.5 7.2 1.3 274 chr3R 9361814 3` UTR CG45050 + chr3R 9361951 3` UTR CG45050 + chr3R 9362088 3` UTR CG45050 + chr3R_11_9360001 chr3R_9360001 RAL-757 1739 chr3R 9447455 9447461 chr3R 9447546 9447565 4 98 8.0 7.0 7.5 0.5 110 chr3R 9447455 intron ps + chr3R 9447510 intron ps + chr3R 9447565 intron ps + chr3R_4_9445001 chr3R_9445001 RAL-757 1740 chr3R 9451542 9451570 chr3R 9451620 9451642 8 73 2.0 3.5 2.8 2.1 100 chr3R 9451542 3` UTR ps + chr3R 9451592 3` UTR ps + chr3R 9451642 3` UTR ps + chr3R_8_9450001 chr3R_9450001 RAL-757 1741 chr3R 9586692 9586724 chr3R 9586782 9586816 14 92 5.0 1.5 3.2 3.3 124 chr3R 9586692 intergenic CG8301 +,P58IPK + chr3R 9586754 intergenic CG8301 +,P58IPK + chr3R 9586816 intergenic P58IPK +,CG8301 + chr3R_14_9585001 chr3R_9585001 RAL-757 1742 chr3R 9592486 9592517 chr3R 9592839 9592870 21 350 4.5 8.0 6.2 2.9 384 chr3R 9592486 intron CG8312 + chr3R 9592678 intron CG8312 + chr3R 9592870 intron CG8312 + chr3R_21_9590001 chr3R_9590001 RAL-757 1743 chr3R 9601474 9601493 chr3R 9601592 9601610 9 117 5.0 5.5 5.2 1.5 136 chr3R 9601474 intron CG8312 + chr3R 9601542 intron CG8312 + chr3R 9601610 intron CG8312 + chr3R_9_9600001 chr3R_9600001 RAL-757 1744 chr3R 9608662 9608689 chr3R 9608928 9608946 7 263 5.5 6.0 5.8 1.0 284 chr3R 9608662 intron CG8312 + chr3R 9608804 intron CG8312 + chr3R 9608946 intron CG8312 + chr3R_7_9605001 chr3R_9605001 RAL-757 1745 chr3R 9699972 9700004 chr3R 9700061 9700093 1360 21 85 5.0 8.5 6.8 2.7 121 chr3R 9699972 intron Unc-115a - chr3R 9700032 intron Unc-115a - chr3R 9700093 intron Unc-115a - chr3R_21_9700001 chr3R_9700001 RAL-757 1746 chr3R 9765926 9765943 chr3R 9766001 9766019 8 74 1.5 9.0 5.2 1.3 93 chr3R 9765926 3` UTR CG8478 + chr3R 9765972 3` UTR CG8478 + chr3R 9766019 3` UTR CG8478 + chr3R_8_9765001 chr3R_9765001 RAL-757 1747 chr3R 9836872 9836900 chr3R 9836960 9836988 17 87 4.5 5.0 4.8 2.9 116 chr3R 9836872 intron Teh1 - chr3R 9836930 intron Teh1 - chr3R 9836988 intron Teh1 - chr3R_17_9835001 chr3R_9835001 RAL-757 1748 chr3R 9859998 9860004 chr3R 9860112 9860118 5 114 1.5 2.5 2.0 1.7 120 chr3R 9859998 intron Teh1 - chr3R 9860058 intron Teh1 - chr3R 9860118 intron Teh1 - chr3R_5_9860001 chr3R_9860001 RAL-757 1749 chr3R 9880170 9880199 chr3R 9883261 9883290 10 3091 41.5 46.0 43.8 0.2 3120 chr3R 9880170 intron Glut4EF + chr3R 9881730 intron Glut4EF + chr3R 9883290 intron Glut4EF + chr3R_10_9880001 chr3R_9880001 RAL-757 1750 chr3R 9891474 9891478 chr3R 9891603 9891618 4 135 2.5 0.5 1.5 1.6 144 chr3R 9891474 intron Glut4EF + chr3R 9891546 intron Glut4EF + chr3R 9891618 intron Glut4EF + chr3R_4_9890001 chr3R_9890001 RAL-757 1751 chr3R 10107755 10107769 chr3R 10107964 10107972 4 209 7.5 6.0 6.8 0.5 217 chr3R 10107755 intron Fmr1 - chr3R 10107864 intron Fmr1 - chr3R 10107972 intron Fmr1 - chr3R_4_10105001 chr3R_10105001 RAL-757 1752 chr3R 10151085 10151115 chr3R 10151161 10151163 13 74 5.0 4.0 4.5 2.4 78 chr3R 10151085 intron Invadolysin + chr3R 10151124 intron Invadolysin + chr3R 10151163 intron,exon Invadolysin +,CG34303 - chr3R_13_10150001 chr3R_10150001 RAL-757 1753 chr3R 10231798 10231814 chr3R 10237359 10237389 mdg3 5 5561 7.0 7.0 7.0 0.6 5591 chr3R 10231798 intron CG42795 + chr3R 10234594 intron CG42795 + chr3R 10237389 intron CG42795 + chr3R_5_10230001 chr3R_10230001 RAL-757 1754 chr3R 10255380 10255387 chr3R 10260818 10260827 I-element 6 5440 15.0 6.0 10.5 0.5 5447 chr3R 10255380 exon Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260827 exon Sirt6 - chr3R_6_10255001 chr3R_10255001 RAL-757 1755 chr3R 10275556 10275585 chr3R 10275633 10275657 12 74 4.5 6.5 5.5 1.8 101 chr3R 10275556 intron CG43143 + chr3R 10275606 intron CG43143 + chr3R 10275657 intron CG43143 + chr3R_12_10275001 chr3R_10275001 RAL-757 1756 chr3R 10455574 10455581 chr3R 10455661 10455693 4 102 4.0 3.5 3.8 0.8 119 chr3R 10455574 intergenic not near genes chr3R 10455634 intergenic not near genes chr3R 10455693 intergenic not near genes chr3R_4_10455001 chr3R_10455001 RAL-757 1757 chr3R 10531871 10531883 chr3R 10531952 10531964 5 81 11.5 1.5 6.5 0.7 93 chr3R 10531871 intron hth - chr3R 10531918 intron hth - chr3R 10531964 intron hth - chr3R_5_10530001 chr3R_10530001 RAL-757 1758 chr3R 10531887 10531898 chr3R 10531951 10531979 8 72 7.0 1.5 4.2 1.5 92 chr3R 10531887 intron hth - chr3R 10531933 intron hth - chr3R 10531979 intron hth - chr3R_8_10530001 chr3R_10530001 RAL-757 1759 chr3R 10596626 10596649 chr3R 10596702 10596709 6 68 2.5 3.5 3.0 1.5 83 chr3R 10596626 intron hth - chr3R 10596668 intron hth - chr3R 10596709 intron hth - chr3R_6_10595001 chr3R_10595001 RAL-757 1760 chr3R 10641590 10641622 chr3R 10641670 10641701 11 76 6.5 2.0 4.2 2.1 111 chr3R 10641590 5` UTR CR44018 + chr3R 10641646 5` UTR CR44018 + chr3R 10641701 5` UTR CR44018 + chr3R_11_10640001 chr3R_10640001 RAL-757 1761 chr3R 10734019 10734035 chr3R 10734081 10734092 4 62 3.0 4.0 3.5 0.9 73 chr3R 10734019 intergenic not near genes chr3R 10734056 intergenic not near genes chr3R 10734092 intergenic not near genes chr3R_4_10730001 chr3R_10730001 RAL-757 1762 chr3R 10868590 10868609 chr3R 10868668 10868682 4 75 7.0 2.0 4.5 0.7 92 chr3R 10868590 5` UTR SelR - chr3R 10868636 5` UTR SelR - chr3R 10868682 intergenic Tsp86D +,SelR - chr3R_4_10865001 chr3R_10865001 RAL-757 1763 chr3R 10919693 10919709 chr3R 10919761 10919785 13 73 10.0 7.0 8.5 1.4 92 chr3R 10919693 intergenic not near genes chr3R 10919739 intergenic not near genes chr3R 10919785 intergenic not near genes chr3R_13_10915001 chr3R_10915001 RAL-757 1764 chr3R 10920044 10920078 chr3R 10920122 10920156 19 77 3.5 2.5 3.0 4.8 112 chr3R 10920044 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920156 intergenic not near genes chr3R_19_10920001 chr3R_10920001 RAL-757 1765 chr3R 10935747 10935778 chr3R 10935828 10935861 7 77 5.0 2.0 3.5 1.6 114 chr3R 10935747 intergenic not near genes chr3R 10935804 intergenic not near genes chr3R 10935861 intergenic not near genes chr3R_7_10935001 chr3R_10935001 RAL-757 1766 chr3R 10963606 10963623 chr3R 10963674 10963701 10 76 6.0 4.5 5.2 1.6 95 chr3R 10963606 intergenic not near genes chr3R 10963654 intergenic not near genes chr3R 10963701 intergenic not near genes chr3R_10_10960001 chr3R_10960001 RAL-757 1767 chr3R 10977863 10977896 chr3R 10977942 10977975 21 78 6.0 2.0 4.0 4.2 112 chr3R 10977863 intron CG34114 + chr3R 10977919 intron CG34114 + chr3R 10977975 intron CG34114 + chr3R_21_10975001 chr3R_10975001 RAL-757 1768 chr3R 10987928 10987951 chr3R 10988019 10988042 9 90 3.0 4.5 3.8 1.9 114 chr3R 10987928 intron CG34114 + chr3R 10987985 intron CG34114 + chr3R 10988042 intron CG34114 + chr3R_9_10985001 chr3R_10985001 RAL-757 1769 chr3R 11010754 11010766 chr3R 11010848 11010861 8 94 6.0 0.0 3.0 2.0 107 chr3R 11010754 intron CG34114 + chr3R 11010808 intron CG34114 + chr3R 11010861 intron CG34114 + chr3R_8_11010001 chr3R_11010001 RAL-757 1770 chr3R 11075803 11075811 chr3R 11075875 11075888 5 75 8.5 3.0 5.8 0.7 85 chr3R 11075803 intergenic not near genes chr3R 11075846 intergenic not near genes chr3R 11075888 intergenic not near genes chr3R_5_11075001 chr3R_11075001 RAL-757 1771 chr3R 11075812 11075826 chr3R 11075873 11075901 6 72 4.5 3.0 3.8 1.2 89 chr3R 11075812 intergenic not near genes chr3R 11075856 intergenic not near genes chr3R 11075901 intergenic not near genes chr3R_6_11075001 chr3R_11075001 RAL-757 1772 chr3R 11078950 11078979 chr3R 11079027 11079058 12 74 4.0 3.0 3.5 2.7 108 chr3R 11078950 intergenic not near genes chr3R 11079004 intergenic not near genes chr3R 11079058 intergenic not near genes chr3R_12_11075001 chr3R_11075001 RAL-757 1773 chr3R 11085466 11085491 chr3R 11085536 11085568 7 75 0.0 3.0 1.5 2.8 102 chr3R 11085466 3` UTR CR44940 - chr3R 11085517 intergenic CR44940 - chr3R 11085568 intergenic CR44940 - chr3R_7_11085001 chr3R_11085001 RAL-757 1774 chr3R 11099660 11099671 chr3R 11099792 11099803 4 132 6.0 6.0 6.0 0.6 143 chr3R 11099660 intergenic not near genes chr3R 11099732 intergenic not near genes chr3R 11099803 intergenic not near genes chr3R_4_11095001 chr3R_11095001 RAL-757 1775 chr3R 11102330 11102355 chr3R 11102411 11102425 4 78 4.5 3.5 4.0 0.8 95 chr3R 11102330 intergenic not near genes chr3R 11102378 intergenic not near genes chr3R 11102425 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-757 1776 chr3R 11103173 11103181 chr3R 11103255 11103263 7 82 1.5 0.5 1.0 3.5 90 chr3R 11103173 intergenic not near genes chr3R 11103218 intergenic not near genes chr3R 11103263 intergenic not near genes chr3R_7_11100001 chr3R_11100001 RAL-757 1777 chr3R 11104271 11104279 chr3R 11104350 11104354 4 78 1.5 0.5 1.0 2.0 83 chr3R 11104271 intergenic not near genes chr3R 11104312 intergenic not near genes chr3R 11104354 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-757 1778 chr3R 11140891 11140908 chr3R 11140973 11140990 7 82 4.0 12.0 8.0 0.8 99 chr3R 11140891 intergenic not near genes chr3R 11140940 intergenic not near genes chr3R 11140990 intergenic not near genes chr3R_7_11140001 chr3R_11140001 RAL-757 1779 chr3R 11142525 11142547 chr3R 11142640 11142661 5 114 3.0 1.5 2.2 1.6 136 chr3R 11142525 intergenic not near genes chr3R 11142593 intergenic not near genes chr3R 11142661 intergenic not near genes chr3R_5_11140001 chr3R_11140001 RAL-757 1780 chr3R 11155046 11155069 chr3R 11155124 11155142 12 75 2.5 5.0 3.8 2.5 96 chr3R 11155046 intron Ugt86Dc + chr3R 11155094 intron Ugt86Dc + chr3R 11155142 intron Ugt86Dc + chr3R_12_11155001 chr3R_11155001 RAL-757 1781 chr3R 11197992 11198011 chr3R 11198086 11198110 7 97 9.5 2.0 5.8 1.0 118 chr3R 11197992 intron cu + chr3R 11198051 intron cu + chr3R 11198110 intron cu + chr3R_7_11195001 chr3R_11195001 RAL-757 1782 chr3R 11342541 11342573 chr3R 11342617 11342643 11 73 6.0 1.0 3.5 2.4 102 chr3R 11342541 intron pros + chr3R 11342592 intron pros + chr3R 11342643 intron pros + chr3R_11_11340001 chr3R_11340001 RAL-757 1783 chr3R 11345645 11345670 chr3R 11345737 11345742 8 92 3.5 5.0 4.2 1.5 97 chr3R 11345645 intron pros + chr3R 11345694 intron pros + chr3R 11345742 intron pros + chr3R_8_11345001 chr3R_11345001 RAL-757 1784 chr3R 11379237 11379268 chr3R 11388392 11388412 roo 9 9150 3.5 3.5 3.5 2.0 9175 chr3R 11379237 intron pros + chr3R 11383824 intron pros + chr3R 11388412 intron pros + chr3R_9_11380001 chr3R_11380001 RAL-757 1785 chr3R 11476951 11476972 chr3R 11477053 11477074 18 100 7.5 6.0 6.8 2.3 123 chr3R 11476951 intergenic not near genes chr3R 11477012 intergenic not near genes chr3R 11477074 intergenic not near genes chr3R_18_11475001 chr3R_11475001 RAL-757 1786 chr3R 11535281 11535293 chr3R 11535522 11535530 6 239 2.0 3.5 2.8 1.6 249 chr3R 11535281 intron dpr4 - chr3R 11535406 intron dpr4 - chr3R 11535530 intron,5` UTR dpr4 -,CR45056 + chr3R_6_11535001 chr3R_11535001 RAL-757 1787 chr3R 11708630 11708663 chr3R 11708838 11708871 20 204 1.5 5.0 3.2 4.8 241 chr3R 11708630 intergenic not near genes chr3R 11708750 intergenic not near genes chr3R 11708871 intergenic not near genes chr3R_20_11705001 chr3R_11705001 RAL-757 1788 chr3R 11830351 11830357 chr3R 11830435 11830437 6 83 3.5 5.0 4.2 1.2 86 chr3R 11830351 intron CG6959 - chr3R 11830394 intron CG6959 - chr3R 11830437 intron CG6959 - chr3R_6_11830001 chr3R_11830001 RAL-757 1789 chr3R 11840055 11840081 chr3R 11840152 11840169 8 91 12.5 0.5 6.5 1.1 114 chr3R 11840055 intron CG6959 - chr3R 11840112 intron CG6959 - chr3R 11840169 intron CG6959 - chr3R_8_11840001 chr3R_11840001 RAL-757 1790 chr3R 11841062 11841100 chr3R 11846253 11846275 BS 11 5183 3.0 5.5 4.2 2.1 5213 chr3R 11841062 intron CG6959 - chr3R 11843668 intron CG6959 - chr3R 11846275 intron CG6959 - chr3R_11_11840001 chr3R_11840001 RAL-757 1791 chr3R 11909682 11909695 chr3R 11909746 11909775 4 69 2.5 4.0 3.2 1.0 93 chr3R 11909682 intron Cad87A - chr3R 11909728 intron Cad87A - chr3R 11909775 intron Cad87A - chr3R_4_11905001 chr3R_11905001 RAL-757 1792 chr3R 12022893 12022914 chr3R 12025069 12025071 pogo 9 2170 6.0 9.5 7.8 1.0 2178 chr3R 12022893 intergenic not near genes chr3R 12023982 intergenic not near genes chr3R 12025071 intergenic not near genes chr3R_9_12020001 chr3R_12020001 RAL-757 1793 chr3R 12045184 12045198 chr3R 12045253 12045271 5 74 4.5 3.0 3.8 1.0 87 chr3R 12045184 intergenic not near genes chr3R 12045228 intergenic not near genes chr3R 12045271 intergenic not near genes chr3R_5_12045001 chr3R_12045001 RAL-757 1794 chr3R 12055392 12055415 chr3R 12055809 12055830 5 416 6.0 6.0 6.0 0.7 438 chr3R 12055392 intergenic not near genes chr3R 12055611 intergenic not near genes chr3R 12055830 intergenic not near genes chr3R_5_12055001 chr3R_12055001 RAL-757 1795 chr3R 12344131 12344157 chr3R 12344208 12344234 9 72 4.0 5.5 4.8 1.6 103 chr3R 12344131 intergenic not near genes chr3R 12344182 intergenic not near genes chr3R 12344234 intergenic not near genes chr3R_9_12340001 chr3R_12340001 RAL-757 1796 chr3R 12344938 12344968 chr3R 12345114 12345144 22 174 5.0 2.5 3.8 4.6 206 chr3R 12344938 intergenic not near genes chr3R 12345041 intergenic not near genes chr3R 12345144 intergenic not near genes chr3R_22_12345001 chr3R_12345001 RAL-757 1797 chr3R 12538205 12538211 chr3R 12538263 12538289 4 73 2.0 5.0 3.5 0.9 84 chr3R 12538205 intron Octbeta3R - chr3R 12538247 intron Octbeta3R - chr3R 12538289 intron Octbeta3R - chr3R_4_12535001 chr3R_12535001 RAL-757 1798 chr3R 12819030 12819048 chr3R 12819113 12819125 6 82 4.5 5.0 4.8 1.0 95 chr3R 12819030 intergenic not near genes chr3R 12819078 intergenic not near genes chr3R 12819125 intergenic not near genes chr3R_6_12815001 chr3R_12815001 RAL-757 1799 chr3R 12872748 12872774 chr3R 12872842 12872872 9 92 3.0 2.0 2.5 2.6 124 chr3R 12872748 intergenic not near genes chr3R 12872810 intergenic not near genes chr3R 12872872 intergenic not near genes chr3R_9_12870001 chr3R_12870001 RAL-757 1800 chr3R 12876954 12876987 chr3R 12877037 12877070 12 80 4.0 3.5 3.8 2.5 116 chr3R 12876954 intergenic not near genes chr3R 12877012 intergenic not near genes chr3R 12877070 intergenic not near genes chr3R_12_12875001 chr3R_12875001 RAL-757 1801 chr3R 12880902 12880934 chr3R 12880980 12881013 12 75 0.0 4.0 2.0 4.0 111 chr3R 12880902 intergenic not near genes chr3R 12880958 intergenic not near genes chr3R 12881013 intergenic not near genes chr3R_12_12880001 chr3R_12880001 RAL-757 1802 chr3R 12914727 12914745 chr3R 12914872 12914890 7 140 6.5 3.0 4.8 1.2 163 chr3R 12914727 intergenic not near genes chr3R 12914808 intergenic not near genes chr3R 12914890 intergenic not near genes chr3R_7_12910001 chr3R_12910001 RAL-757 1803 chr3R 12914746 12914754 chr3R 12914871 12914889 5 136 3.5 3.0 3.2 1.2 143 chr3R 12914746 intergenic not near genes chr3R 12914818 intergenic not near genes chr3R 12914889 intergenic not near genes chr3R_5_12910001 chr3R_12910001 RAL-757 1804 chr3R 12920160 12920184 chr3R 12925359 12925374 copia 6 5199 2.0 5.0 3.5 1.3 5214 chr3R 12920160 intron beat-Vb + chr3R 12922767 intron beat-Vb + chr3R 12925374 intron beat-Vb + chr3R_6_12920001 chr3R_12920001 RAL-757 1805 chr3R 12933194 12933228 chr3R 12933282 12933316 13 86 2.0 3.0 2.5 3.7 122 chr3R 12933194 intron beat-Vb + chr3R 12933255 intron beat-Vb + chr3R 12933316 intron beat-Vb + chr3R_13_12930001 chr3R_12930001 RAL-757 1806 chr3R 12960556 12960578 chr3R 12960636 12960646 10 77 4.0 5.5 4.8 1.7 90 chr3R 12960556 intron grsm - chr3R 12960601 intron grsm - chr3R 12960646 intron grsm - chr3R_10_12960001 chr3R_12960001 RAL-757 1807 chr3R 12972555 12972582 chr3R 12972694 12972721 11 138 6.0 3.0 4.5 2.0 166 chr3R 12972555 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972721 intron CG7381 - chr3R_11_12970001 chr3R_12970001 RAL-757 1808 chr3R 12974704 12974724 chr3R 12974857 12974872 6 151 11.0 2.0 6.5 0.8 168 chr3R 12974704 intron CG7381 - chr3R 12974788 intron CG7381 - chr3R 12974872 intron CG7381 - chr3R_6_12970001 chr3R_12970001 RAL-757 1809 chr3R 12974725 12974741 chr3R 12974856 12974894 6 140 4.5 2.0 3.2 1.4 169 chr3R 12974725 intron CG7381 - chr3R 12974810 intron CG7381 - chr3R 12974894 intron CG7381 - chr3R_6_12970001 chr3R_12970001 RAL-757 1810 chr3R 12993134 12993321 chr3R 12993199 12993382 22 72 5.0 1.5 3.2 5.2 248 chr3R 12993134 exon yellow-f - chr3R 12993258 intergenic yellow-f -,yellow-f2 - chr3R 12993382 intergenic yellow-f2 -,yellow-f - chr3R_22_12990001 chr3R_12990001 RAL-757 1811 chr3R 13059965 13059977 chr3R 13060159 13060172 7 194 2.5 4.5 3.5 1.6 207 chr3R 13059965 intron sim + chr3R 13060068 intron sim + chr3R 13060172 intron sim + chr3R_7_13060001 chr3R_13060001 RAL-757 1812 chr3R 13104419 13104420 chr3R 21907534 21907536 27 8803115 24.5 29.5 27.0 1.0 8803117 chr3R 13104419 intron timeout + chr3R 17505978 intergenic Dscam3 - chr3R 21907536 intergenic CG6678 + chr3R_27_17505001 chr3R_17505001 RAL-757 1813 chr3R 13120771 13120796 chr3R 13120847 13120847 7 69 4.0 6.5 5.2 1.1 76 chr3R 13120771 intron timeout + chr3R 13120809 intron timeout + chr3R 13120847 intron timeout + chr3R_7_13120001 chr3R_13120001 RAL-757 1814 chr3R 13135827 13135858 chr3R 13138002 13138031 pogo 9 2173 6.0 6.5 6.2 1.2 2204 chr3R 13135827 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136929 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138031 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13135001 chr3R_13135001 RAL-757 1815 chr3R 13139930 13139939 chr3R 13140155 13140160 6 223 5.0 4.5 4.8 1.0 230 chr3R 13139930 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13140045 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13140160 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_6_13140001 chr3R_13140001 RAL-757 1816 chr3R 13143040 13143063 chr3R 13148616 13148624 mdg3 8 5569 3.5 6.5 5.0 1.3 5584 chr3R 13143040 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145832 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148624 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13145001 chr3R_13145001 RAL-757 1817 chr3R 13195960 13195983 chr3R 13196046 13196076 6 92 5.0 3.0 4.0 1.2 116 chr3R 13195960 intergenic not near genes chr3R 13196018 intergenic not near genes chr3R 13196076 intergenic not near genes chr3R_6_13195001 chr3R_13195001 RAL-757 1818 chr3R 13218853 13218867 chr3R 13219132 13219146 8 276 5.5 2.5 4.0 1.6 293 chr3R 13218853 intergenic not near genes chr3R 13219000 intergenic not near genes chr3R 13219146 intergenic CG8476 - chr3R_8_13215001 chr3R_13215001 RAL-757 1819 chr3R 13218868 13218886 chr3R 13219131 13219150 12 270 3.0 2.5 2.8 3.2 282 chr3R 13218868 intergenic not near genes chr3R 13219009 intergenic not near genes chr3R 13219150 intergenic CG8476 - chr3R_12_13215001 chr3R_13215001 RAL-757 1820 chr3R 13248650 13248681 chr3R 13248749 13248777 14 98 9.0 3.5 6.2 1.9 127 chr3R 13248650 intron Ace - chr3R 13248714 intron Ace - chr3R 13248777 intron Ace - chr3R_14_13245001 chr3R_13245001 RAL-757 1821 chr3R 13274210 13274248 chr3R 13274289 13274307 17 71 5.5 3.5 4.5 3.1 97 chr3R 13274210 intergenic not near genes chr3R 13274258 intergenic not near genes chr3R 13274307 intergenic not near genes chr3R_17_13270001 chr3R_13270001 RAL-757 1822 chr3R 13294010 13294040 chr3R 13294174 13294197 17 161 5.5 5.0 5.2 2.7 187 chr3R 13294010 intergenic not near genes chr3R 13294104 intergenic not near genes chr3R 13294197 intergenic not near genes chr3R_17_13290001 chr3R_13290001 RAL-757 1823 chr3R 13420972 13420990 chr3R 13421064 13421079 5 93 8.5 7.0 7.8 0.6 107 chr3R 13420972 exon Ir87a + chr3R 13421026 exon Ir87a + chr3R 13421079 exon Ir87a + chr3R_5_13420001 chr3R_13420001 RAL-757 1824 chr3R 13435228 13435420 chr3R 13435361 13435595 23 161 1.5 2.0 1.8 8.2 367 chr3R 13435228 intergenic yrt - chr3R 13435412 intergenic yrt - chr3R 13435595 intergenic not near genes chr3R_23_13435001 chr3R_13435001 RAL-757 1825 chr3R 13439583 13439588 chr3R 13439663 13439670 4 82 4.0 7.5 5.8 0.6 87 chr3R 13439583 intergenic CR42756 - chr3R 13439626 intergenic CR42756 - chr3R 13439670 intergenic CR42756 - chr3R_4_13435001 chr3R_13435001 RAL-757 1826 chr3R 13450078 13450102 chr3R 13450229 13450245 7 148 4.0 7.0 5.5 1.1 167 chr3R 13450078 intergenic not near genes chr3R 13450162 intergenic CG14372 + chr3R 13450245 intergenic CG14372 + chr3R_7_13450001 chr3R_13450001 RAL-757 1827 chr3R 13517226 13517253 chr3R 13520043 13520070 jockey 10 2817 5.0 5.0 5.0 1.7 2844 chr3R 13517226 intergenic not near genes chr3R 13518648 intergenic not near genes chr3R 13520070 intergenic not near genes chr3R_10_13515001 chr3R_13515001 RAL-757 1828 chr3R 13517254 13517256 chr3R 13520035 13520066 jockey 4 2792 5.0 5.0 5.0 0.7 2812 chr3R 13517254 intergenic not near genes chr3R 13518660 intergenic not near genes chr3R 13520066 intergenic not near genes chr3R_4_13515001 chr3R_13515001 RAL-757 1829 chr3R 13554169 13554174 chr3R 13554224 13554224 4 58 9.0 5.0 7.0 0.5 55 chr3R 13554169 intergenic not near genes chr3R 13554196 intergenic not near genes chr3R 13554224 intergenic not near genes chr3R_4_13550001 chr3R_13550001 RAL-757 1830 chr3R 13603072 13603074 chr3R 13603152 13603159 4 87 3.0 5.0 4.0 0.8 87 chr3R 13603072 intergenic not near genes chr3R 13603116 intergenic not near genes chr3R 13603159 intergenic not near genes chr3R_4_13600001 chr3R_13600001 RAL-757 1831 chr3R 13609560 13609579 chr3R 13609648 13609673 6 90 0.0 2.0 1.0 3.0 113 chr3R 13609560 intergenic CG9759 - chr3R 13609616 intergenic CG9759 - chr3R 13609673 intergenic CG9759 - chr3R_6_13605001 chr3R_13605001 RAL-757 1832 chr3R 13617680 13617710 chr3R 13617781 13617817 12 106 6.5 3.5 5.0 2.0 137 chr3R 13617680 intergenic CR45680 - chr3R 13617748 intergenic CR45680 - chr3R 13617817 3` UTR CR45680 - chr3R_12_13615001 chr3R_13615001 RAL-757 1833 chr3R 13659719 13659847 chr3R 13659825 13659936 23 101 0.0 0.0 0.0 23.0 217 chr3R 13659719 intron Hrb87F - chr3R 13659828 intron Hrb87F - chr3R 13659936 intron Hrb87F - chr3R_23_13655001 chr3R_13655001 RAL-757 1834 chr3R 13693027 13693028 chr3R 21907534 21907536 8 8214507 26.5 29.5 28.0 0.3 8214509 chr3R 13693027 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_8_17800001 chr3R_17800001 RAL-757 1835 chr3R 13714519 13714550 chr3R 13714658 13714689 16 138 4.5 7.0 5.8 2.4 170 chr3R 13714519 intergenic CR34044 - chr3R 13714604 intergenic CR34044 - chr3R 13714689 intergenic CR34044 - chr3R_16_13710001 chr3R_13710001 RAL-757 1836 chr3R 13736073 13736087 chr3R 13736144 13736177 11 80 0.5 5.5 3.0 2.8 104 chr3R 13736073 intron CG34383 + chr3R 13736125 intron CG34383 + chr3R 13736177 intron CG34383 + chr3R_11_13735001 chr3R_13735001 RAL-757 1837 chr3R 13782055 13782079 chr3R 13782136 13782137 7 77 6.0 3.0 4.5 1.3 82 chr3R 13782055 exon CG9286 + chr3R 13782096 intergenic CG9286 +,Dip-B + chr3R 13782137 intergenic CG9286 +,Dip-B + chr3R_7_13780001 chr3R_13780001 RAL-757 1838 chr3R 13900355 13900381 chr3R 13900723 13900737 8 359 2.5 2.5 2.5 2.3 382 chr3R 13900355 intergenic not near genes chr3R 13900546 intergenic not near genes chr3R 13900737 intergenic not near genes chr3R_8_13900001 chr3R_13900001 RAL-757 1839 chr3R 13925986 13926019 chr3R 13926063 13926092 8 73 6.5 2.0 4.2 1.5 106 chr3R 13925986 intergenic not near genes chr3R 13926039 intergenic not near genes chr3R 13926092 intergenic not near genes chr3R_8_13925001 chr3R_13925001 RAL-757 1840 chr3R 13975374 13975407 chr3R 13975450 13975480 12 77 4.0 2.5 3.2 2.9 106 chr3R 13975374 intron rdx - chr3R 13975427 intron rdx - chr3R 13975480 intron rdx - chr3R_12_13975001 chr3R_13975001 RAL-757 1841 chr3R 14014278 14014306 chr3R 14014410 14014438 4 130 1.0 0.5 0.8 2.2 160 chr3R 14014278 intron rdx - chr3R 14014358 intron rdx - chr3R 14014438 intron rdx - chr3R_4_14010001 chr3R_14010001 RAL-757 1842 chr3R 14021641 14021650 chr3R 14023466 14023475 S-element 4 1825 9.5 2.0 5.8 0.6 1834 chr3R 14021641 intron rdx - chr3R 14022558 intron rdx - chr3R 14023475 intron rdx - chr3R_4_14020001 chr3R_14020001 RAL-757 1843 chr3R 14079830 14079855 chr3R 14079906 14079911 13 76 2.0 0.5 1.2 5.9 81 chr3R 14079830 intron foxo + chr3R 14079870 intron foxo + chr3R 14079911 intron foxo + chr3R_13_14075001 chr3R_14075001 RAL-757 1844 chr3R 14083412 14083436 chr3R 14083507 14083537 18 100 2.5 0.5 1.5 7.2 125 chr3R 14083412 intron foxo + chr3R 14083474 intron foxo + chr3R 14083537 intron foxo + chr3R_18_14080001 chr3R_14080001 RAL-757 1845 chr3R 14109084 14109113 chr3R 14109165 14109194 14 80 3.5 5.5 4.5 2.5 110 chr3R 14109084 intergenic CR44237 -,Or88a + chr3R 14109139 intergenic CR44237 -,Or88a + chr3R 14109194 intergenic CR44237 -,Or88a + chr3R_14_14105001 chr3R_14105001 RAL-757 1846 chr3R 14117439 14117473 chr3R 14117515 14117549 21 73 6.0 10.5 8.2 2.3 110 chr3R 14117439 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117549 intron Kif19A - chr3R_21_14115001 chr3R_14115001 RAL-757 1847 chr3R 14168461 14168469 chr3R 14168549 14168557 4 86 0.0 11.0 5.5 0.6 96 chr3R 14168461 3` UTR Dop1R1 - chr3R 14168509 3` UTR Dop1R1 - chr3R 14168557 3` UTR Dop1R1 - chr3R_4_14165001 chr3R_14165001 RAL-757 1848 chr3R 14170152 14170175 chr3R 14170242 14170265 5 89 4.0 4.0 4.0 1.0 113 chr3R 14170152 3` UTR Dop1R1 - chr3R 14170208 3` UTR Dop1R1 - chr3R 14170265 3` UTR Dop1R1 - chr3R_5_14170001 chr3R_14170001 RAL-757 1849 chr3R 14180810 14180840 chr3R 14185575 14185578 F-element 8 4755 6.0 6.5 6.2 1.1 4768 chr3R 14180810 intron Dop1R1 - chr3R 14183194 intron Dop1R1 - chr3R 14185578 intron Dop1R1 - chr3R_8_14180001 chr3R_14180001 RAL-757 1850 chr3R 14193731 14193764 chr3R 14193809 14193842 13 75 2.0 4.0 3.0 3.2 111 chr3R 14193731 intron Dop1R1 - chr3R 14193786 intron Dop1R1 - chr3R 14193842 intron Dop1R1 - chr3R_13_14190001 chr3R_14190001 RAL-757 1851 chr3R 14295531 14295557 chr3R 14295610 14295640 9 81 0.5 10.0 5.2 1.5 109 chr3R 14295531 intron CG12207 + chr3R 14295586 intron CG12207 + chr3R 14295640 intron CG12207 + chr3R_9_14295001 chr3R_14295001 RAL-757 1852 chr3R 14354819 14354840 chr3R 14354910 14354931 8 90 0.0 2.5 1.2 3.6 112 chr3R 14354819 intron NK7.1 - chr3R 14354875 intron NK7.1 - chr3R 14354931 intron NK7.1 - chr3R_8_14350001 chr3R_14350001 RAL-757 1853 chr3R 14384622 14384643 chr3R 14384709 14384733 9 88 0.0 1.0 0.5 6.0 111 chr3R 14384622 intergenic not near genes chr3R 14384678 intergenic not near genes chr3R 14384733 intergenic not near genes chr3R_9_14380001 chr3R_14380001 RAL-757 1854 chr3R 14656825 14656849 chr3R 14656909 14656933 10 83 6.0 5.0 5.5 1.5 108 chr3R 14656825 intergenic not near genes chr3R 14656879 intergenic not near genes chr3R 14656933 intergenic not near genes chr3R_10_14655001 chr3R_14655001 RAL-757 1855 chr3R 14795675 14795694 chr3R 14795743 14795759 10 75 3.5 5.0 4.2 1.9 84 chr3R 14795675 3` UTR jvl + chr3R 14795717 3` UTR jvl + chr3R 14795759 3` UTR jvl + chr3R_10_14795001 chr3R_14795001 RAL-757 1856 chr3R 14796315 14796326 chr3R 14796447 14796475 5 143 3.0 4.5 3.8 1.0 160 chr3R 14796315 5` UTR CG14855 + chr3R 14796395 5` UTR CG14855 + chr3R 14796475 5` UTR CG14855 + chr3R_5_14795001 chr3R_14795001 RAL-757 1857 chr3R 14898475 14898505 chr3R 14898595 14898625 11 119 4.5 4.0 4.2 2.1 150 chr3R 14898475 intergenic Nup93-2 -,CG3817 + chr3R 14898550 intergenic Nup93-2 -,CG3817 + chr3R 14898625 intergenic CG3817 +,Nup93-2 - chr3R_11_14895001 chr3R_14895001 RAL-757 1858 chr3R 15026331 15026345 chr3R 15026417 15026431 9 85 2.5 3.0 2.8 2.4 100 chr3R 15026331 intergenic not near genes chr3R 15026381 intergenic not near genes chr3R 15026431 intergenic not near genes chr3R_9_15025001 chr3R_15025001 RAL-757 1859 chr3R 15041420 15041459 chr3R 15045187 15045227 Doc 12 3766 2.5 4.5 3.5 2.7 3807 chr3R 15041420 intergenic not near genes chr3R 15043324 intergenic not near genes chr3R 15045227 intergenic not near genes chr3R_12_15040001 chr3R_15040001 RAL-757 1860 chr3R 15079809 15079838 chr3R 15080047 15080050 pogo 11 233 7.5 1.5 4.5 2.0 241 chr3R 15079809 3` UTR CG6966 - chr3R 15079930 3` UTR CG6966 - chr3R 15080050 3` UTR CG6966 - chr3R_11_15075001 chr3R_15075001 RAL-757 1861 chr3R 15102501 15102530 chr3R 15109752 15109785 412 11 7255 6.0 6.0 6.0 1.6 7284 chr3R 15102501 intron CG42788 - chr3R 15106143 intron CG42788 - chr3R 15109785 intron CG42788 - chr3R_11_15105001 chr3R_15105001 RAL-757 1862 chr3R 15127786 15127798 chr3R 15127866 15127877 9 80 9.5 5.0 7.2 1.1 91 chr3R 15127786 intron CG42788 - chr3R 15127832 intron CG42788 - chr3R 15127877 intron CG42788 - chr3R_9_15125001 chr3R_15125001 RAL-757 1863 chr3R 15127800 15127810 chr3R 15127864 15127890 4 75 6.0 4.0 5.0 0.7 90 chr3R 15127800 intron CG42788 - chr3R 15127845 intron CG42788 - chr3R 15127890 intron CG42788 - chr3R_4_15125001 chr3R_15125001 RAL-757 1864 chr3R 15132059 15132069 chr3R 15135119 15135129 Juan 5 3060 19.0 13.0 16.0 0.3 3070 chr3R 15132059 intergenic CG42788 - chr3R 15133594 intergenic not near genes chr3R 15135129 intergenic CG6912 - chr3R_5_15130001 chr3R_15130001 RAL-757 1865 chr3R 15132073 15132088 chr3R 15135113 15135138 Juan 9 3046 12.5 11.0 11.8 0.7 3065 chr3R 15132073 intergenic CG42788 - chr3R 15133606 intergenic not near genes chr3R 15135138 3` UTR CG6912 - chr3R_9_15130001 chr3R_15130001 RAL-757 1866 chr3R 15160565 15160590 chr3R 15160663 15160688 10 98 6.0 5.5 5.8 1.5 123 chr3R 15160565 intron Gyc88E + chr3R 15160626 intron Gyc88E + chr3R 15160688 intron Gyc88E + chr3R_10_15160001 chr3R_15160001 RAL-757 1867 chr3R 15302237 15302254 chr3R 15302314 15302325 9 76 8.0 2.5 5.2 1.5 88 chr3R 15302237 intron Tm1 + chr3R 15302281 intron Tm1 + chr3R 15302325 intron Tm1 + chr3R_9_15300001 chr3R_15300001 RAL-757 1868 chr3R 15416265 15416285 chr3R 15416345 15416350 7 75 2.0 11.5 6.8 0.9 85 chr3R 15416265 3` UTR Atx2 + chr3R 15416308 3` UTR Atx2 + chr3R 15416350 3` UTR Atx2 + chr3R_7_15415001 chr3R_15415001 RAL-757 1869 chr3R 15566415 15566446 chr3R 15566499 15566523 7 82 1.0 4.0 2.5 2.0 108 chr3R 15566415 intergenic not near genes chr3R 15566469 intergenic not near genes chr3R 15566523 intergenic not near genes chr3R_7_15565001 chr3R_15565001 RAL-757 1870 chr3R 15594654 15594676 chr3R 15594736 15594759 8 81 0.0 7.5 3.8 1.7 105 chr3R 15594654 intergenic not near genes chr3R 15594706 intergenic not near genes chr3R 15594759 intergenic not near genes chr3R_8_15590001 chr3R_15590001 RAL-757 1871 chr3R 15601163 15601196 chr3R 15608685 15608714 412 18 7518 8.0 6.0 7.0 2.2 7551 chr3R 15601163 intergenic not near genes chr3R 15604938 intergenic not near genes chr3R 15608714 intergenic not near genes chr3R_18_15600001 chr3R_15600001 RAL-757 1872 chr3R 15608804 15608814 chr3R 15609020 15609041 7 226 10.5 4.0 7.2 0.9 237 chr3R 15608804 intergenic not near genes chr3R 15608922 intergenic not near genes chr3R 15609041 intergenic not near genes chr3R_7_15605001 chr3R_15605001 RAL-757 1873 chr3R 15691186 15691325 chr3R 15691291 15691402 10 86 2.5 3.0 2.8 2.6 216 chr3R 15691186 intergenic not near genes chr3R 15691294 intergenic not near genes chr3R 15691402 intergenic not near genes chr3R_10_15690001 chr3R_15690001 RAL-757 1874 chr3R 15692647 15692678 chr3R 15692740 15692771 10 88 6.0 4.0 5.0 1.7 124 chr3R 15692647 intergenic CG31446 + chr3R 15692709 intergenic CG31446 + chr3R 15692771 intergenic CG31446 + chr3R_10_15690001 chr3R_15690001 RAL-757 1875 chr3R 15752281 15752308 chr3R 15752369 15752396 4 88 4.5 1.0 2.8 1.1 115 chr3R 15752281 intergenic not near genes chr3R 15752338 intergenic not near genes chr3R 15752396 intergenic not near genes chr3R_4_15750001 chr3R_15750001 RAL-757 1876 chr3R 15816038 15816061 chr3R 15816307 15816330 6 266 6.5 6.5 6.5 0.8 292 chr3R 15816038 intron alpha-Man-IIb + chr3R 15816184 intron alpha-Man-IIb + chr3R 15816330 intron alpha-Man-IIb + chr3R_6_15815001 chr3R_15815001 RAL-757 1877 chr3R 16033418 16033440 chr3R 16033492 16033521 6 79 2.0 6.5 4.2 1.2 103 chr3R 16033418 intron pnr + chr3R 16033470 intron pnr + chr3R 16033521 intron pnr + chr3R_6_16030001 chr3R_16030001 RAL-757 1878 chr3R 16225090 16225118 chr3R 16225175 16225201 14 82 6.5 1.0 3.8 2.9 111 chr3R 16225090 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225201 intergenic tara + chr3R_14_16225001 chr3R_16225001 RAL-757 1879 chr3R 16260841 16260843 chr3R 16260918 16260923 4 79 0.0 8.5 4.2 0.8 82 chr3R 16260841 intergenic not near genes chr3R 16260882 intergenic bor - chr3R 16260923 intergenic bor - chr3R_4_16260001 chr3R_16260001 RAL-757 1880 chr3R 16275583 16275607 chr3R 16275898 16275922 7 311 4.0 6.0 5.0 1.2 339 chr3R 16275583 intron gish + chr3R 16275752 intron gish + chr3R 16275922 intron gish + chr3R_7_16275001 chr3R_16275001 RAL-757 1881 chr3R 16374311 16374329 chr3R 16374414 16374437 10 109 4.0 3.0 3.5 2.2 126 chr3R 16374311 intergenic ss - chr3R 16374374 intergenic ss - chr3R 16374437 3` UTR ss - chr3R_10_16370001 chr3R_16370001 RAL-757 1882 chr3R 16472580 16472592 chr3R 16472655 16472666 7 75 8.5 7.0 7.8 0.8 86 chr3R 16472580 intergenic Gyc-89Da + chr3R 16472623 5` UTR Gyc-89Da + chr3R 16472666 5` UTR Gyc-89Da + chr3R_7_16470001 chr3R_16470001 RAL-757 1883 chr3R 16671508 16671518 chr3R 16671588 16671603 4 82 10.0 2.0 6.0 0.6 95 chr3R 16671508 intron Ubx - chr3R 16671556 intron Ubx - chr3R 16671603 intron Ubx - chr3R_4_16670001 chr3R_16670001 RAL-757 1884 chr3R 16748339 16748340 chr3R 16748425 16748444 4 90 27.5 35.5 31.5 0.1 105 chr3R 16748339 intron bxd - chr3R 16748392 intron bxd - chr3R 16748444 intron bxd - chr3R_4_16745001 chr3R_16745001 RAL-757 1885 chr3R 16756328 16756350 chr3R 16762508 16762513 diver 9 6181 3.0 2.5 2.8 2.4 6185 chr3R 16756328 intron bxd - chr3R 16759420 intron bxd - chr3R 16762513 intron bxd - chr3R_9_16755001 chr3R_16755001 RAL-757 1886 chr3R 16941012 16941036 chr3R 16941171 16941205 10 166 5.5 4.0 4.8 1.7 193 chr3R 16941012 intron Abd-B - chr3R 16941108 intron Abd-B - chr3R 16941205 intron Abd-B - chr3R_10_16940001 chr3R_16940001 RAL-757 1887 chr3R 17065564 17065598 chr3R 17065838 17065871 12 268 3.0 4.5 3.8 2.5 307 chr3R 17065564 intron Dad + chr3R 17065718 intron Dad + chr3R 17065871 intron Dad + chr3R_12_17065001 chr3R_17065001 RAL-757 1888 chr3R 17121524 17121555 chr3R 17121719 17121750 13 191 3.5 3.0 3.2 3.1 226 chr3R 17121524 intron cher - chr3R 17121637 intron,exon cher -,CG42779 + chr3R 17121750 intron,exon cher -,CG42779 + chr3R_13_17120001 chr3R_17120001 RAL-757 1889 chr3R 17184736 17184757 chr3R 17184812 17184833 12 72 3.5 5.5 4.5 2.2 97 chr3R 17184736 intron Mur89F - chr3R 17184784 intron Mur89F - chr3R 17184833 intron Mur89F - chr3R_12_17180001 chr3R_17180001 RAL-757 1890 chr3R 17209703 17209712 chr3R 17209791 17209800 4 88 11.0 9.0 10.0 0.4 97 chr3R 17209703 intergenic not near genes chr3R 17209752 intergenic not near genes chr3R 17209800 intergenic not near genes chr3R_4_17205001 chr3R_17205001 RAL-757 1891 chr3R 17290443 17290472 chr3R 17290529 17290554 20 83 3.5 4.0 3.8 4.2 111 chr3R 17290443 intergenic not near genes chr3R 17290498 intergenic not near genes chr3R 17290554 intergenic not near genes chr3R_20_17290001 chr3R_17290001 RAL-757 1892 chr3R 17294670 17294676 chr3R 17295097 17295104 BS 4 426 5.5 7.5 6.5 0.5 434 chr3R 17294670 intergenic not near genes chr3R 17294887 intergenic not near genes chr3R 17295104 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-757 1893 chr3R 17294679 17294703 chr3R 17295088 17295125 BS 10 423 1.5 5.0 3.2 2.4 446 chr3R 17294679 intergenic not near genes chr3R 17294902 intergenic not near genes chr3R 17295125 intergenic not near genes chr3R_10_17290001 chr3R_17290001 RAL-757 1894 chr3R 17312831 17312848 chr3R 17312902 17312933 8 78 3.5 1.0 2.2 2.5 102 chr3R 17312831 intergenic not near genes chr3R 17312882 intergenic not near genes chr3R 17312933 intergenic not near genes chr3R_8_17310001 chr3R_17310001 RAL-757 1895 chr3R 17316047 17316069 chr3R 17316361 17316381 8 312 7.5 2.5 5.0 1.3 334 chr3R 17316047 intergenic not near genes chr3R 17316214 intergenic not near genes chr3R 17316381 intergenic not near genes chr3R_8_17315001 chr3R_17315001 RAL-757 1896 chr3R 17342894 17342924 chr3R 17342978 17343007 11 78 3.0 12.0 7.5 1.3 113 chr3R 17342894 intron beat-IIa - chr3R 17342950 intron beat-IIa - chr3R 17343007 intron beat-IIa - chr3R_11_17340001 chr3R_17340001 RAL-757 1897 chr3R 17346688 17346722 chr3R 17348251 17348261 F-element 10 1559 5.5 9.5 7.5 1.2 1573 chr3R 17346688 intron beat-IIa - chr3R 17347474 intron beat-IIa - chr3R 17348261 intron beat-IIa - chr3R_10_17345001 chr3R_17345001 RAL-757 1898 chr3R 17461204 17461232 chr3R 17461282 17461314 10 82 2.5 3.5 3.0 2.5 110 chr3R 17461204 intergenic not near genes chr3R 17461259 intergenic not near genes chr3R 17461314 intergenic not near genes chr3R_10_17460001 chr3R_17460001 RAL-757 1899 chr3R 17521580 17521590 chr3R 17521716 17521748 8 153 0.5 5.5 3.0 2.0 168 chr3R 17521580 intergenic not near genes chr3R 17521664 intergenic not near genes chr3R 17521748 intergenic not near genes chr3R_8_17520001 chr3R_17520001 RAL-757 1900 chr3R 17522215 17522243 chr3R 17522306 17522320 6 87 1.5 0.0 0.8 3.3 105 chr3R 17522215 intergenic not near genes chr3R 17522268 intergenic not near genes chr3R 17522320 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-757 1901 chr3R 17524922 17524928 chr3R 17524996 17525008 4 78 0.0 15.0 7.5 0.5 86 chr3R 17524922 intergenic not near genes chr3R 17524965 intergenic not near genes chr3R 17525008 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-757 1902 chr3R 17531220 17531233 chr3R 17531309 17531317 10 102 4.0 3.5 3.8 2.1 97 chr3R 17531220 intergenic not near genes chr3R 17531268 intergenic not near genes chr3R 17531317 intergenic not near genes chr3R_10_17530001 chr3R_17530001 RAL-757 1903 chr3R 17531907 17531914 chr3R 17531963 17531991 4 64 2.0 8.0 5.0 0.7 84 chr3R 17531907 intergenic CG5823 - chr3R 17531949 intergenic CG5823 - chr3R 17531991 intergenic CG5823 - chr3R_4_17530001 chr3R_17530001 RAL-757 1904 chr3R 17591291 17591327 chr3R 17591727 17591730 F-element 8 424 5.5 6.5 6.0 1.1 439 chr3R 17591291 intergenic not near genes chr3R 17591510 intergenic not near genes chr3R 17591730 intergenic not near genes chr3R_8_17590001 chr3R_17590001 RAL-757 1905 chr3R 17625200 17625216 chr3R 17625585 17625599 5 383 3.0 3.5 3.2 1.2 399 chr3R 17625200 intergenic AttD + chr3R 17625400 exon AttD + chr3R 17625599 exon AttD + chr3R_5_17625001 chr3R_17625001 RAL-757 1906 chr3R 17638315 17638351 chr3R 17638801 17638836 roo 21 484 4.5 7.5 6.0 3.0 521 chr3R 17638315 intron CG43175 + chr3R 17638576 intron CG43175 + chr3R 17638836 intron,intron CG43175 +,CR45222 + chr3R_21_17635001 chr3R_17635001 RAL-757 1907 chr3R 17647251 17647273 chr3R 17647348 17647370 7 95 6.0 7.0 6.5 0.9 119 chr3R 17647251 intergenic CG14322 + chr3R 17647310 intergenic CG14322 + chr3R 17647370 intergenic CG14322 + chr3R_7_17645001 chr3R_17645001 RAL-757 1908 chr3R 17734842 17734854 chr3R 17734956 17734967 6 113 7.5 3.5 5.5 0.9 125 chr3R 17734842 intergenic CG14321 + chr3R 17734904 intergenic not near genes chr3R 17734967 intergenic not near genes chr3R_6_17730001 chr3R_17730001 RAL-757 1909 chr3R 17814765 17814798 chr3R 17814850 17814875 12 80 3.0 6.0 4.5 2.2 110 chr3R 17814765 intron tinc + chr3R 17814820 intron tinc + chr3R 17814875 intron tinc + chr3R_12_17810001 chr3R_17810001 RAL-757 1910 chr3R 17823212 17823234 chr3R 17823297 17823319 10 82 6.0 7.0 6.5 1.3 107 chr3R 17823212 intron tinc + chr3R 17823266 intron tinc + chr3R 17823319 intron tinc + chr3R_10_17820001 chr3R_17820001 RAL-757 1911 chr3R 17899088 17899119 chr3R 17899166 17899175 10 75 6.0 4.0 5.0 1.7 87 chr3R 17899088 intron Rim - chr3R 17899132 intron Rim - chr3R 17899175 intron Rim - chr3R_10_17895001 chr3R_17895001 RAL-757 1912 chr3R 17923850 17923860 chr3R 17923937 17923947 5 86 5.0 4.5 4.8 0.9 97 chr3R 17923850 intron cpo + chr3R 17923898 intron cpo + chr3R 17923947 intron cpo + chr3R_5_17920001 chr3R_17920001 RAL-757 1913 chr3R 17925869 17925888 chr3R 17927317 17927355 hobo 9 1457 7.5 11.0 9.2 0.9 1486 chr3R 17925869 intron cpo + chr3R 17926612 intron cpo + chr3R 17927355 intron cpo + chr3R_9_17925001 chr3R_17925001 RAL-757 1914 chr3R 18041771 18041774 chr3R 18041830 18041836 4 60 0.0 6.0 3.0 1.0 65 chr3R 18041771 intergenic not near genes chr3R 18041804 intergenic not near genes chr3R 18041836 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-757 1915 chr3R 18122894 18122911 chr3R 18122971 18122972 5 74 4.0 3.0 3.5 1.1 78 chr3R 18122894 intron sr + chr3R 18122933 intron sr + chr3R 18122972 intron sr + chr3R_5_18120001 chr3R_18120001 RAL-757 1916 chr3R 18143496 18143509 chr3R 18143581 18143586 7 84 4.0 0.0 2.0 2.3 90 chr3R 18143496 intergenic not near genes chr3R 18143541 intergenic not near genes chr3R 18143586 intergenic not near genes chr3R_7_18140001 chr3R_18140001 RAL-757 1917 chr3R 18235211 18235244 chr3R 18235387 18235420 17 171 7.0 9.0 8.0 1.9 209 chr3R 18235211 intergenic not near genes chr3R 18235316 intergenic not near genes chr3R 18235420 intergenic not near genes chr3R_17_18235001 chr3R_18235001 RAL-757 1918 chr3R 18328570 18328589 chr3R 18328664 18328683 5 94 3.5 5.0 4.2 1.0 113 chr3R 18328570 intron CG31235 - chr3R 18328626 intron CG31235 - chr3R 18328683 intron CG31235 - chr3R_5_18325001 chr3R_18325001 RAL-757 1919 chr3R 18331781 18331800 chr3R 18333275 18333285 hopper2 5 1487 8.0 8.0 8.0 0.6 1504 chr3R 18331781 3` UTR CG15803 - chr3R 18332533 intron CG15803 - chr3R 18333285 3` UTR CG15803 - chr3R_5_18330001 chr3R_18330001 RAL-757 1920 chr3R 18501592 18501629 chr3R 18501673 18501710 24 78 3.0 8.5 5.8 3.5 118 chr3R 18501592 intron fru - chr3R 18501651 intron fru - chr3R 18501710 intron fru - chr3R_24_18500001 chr3R_18500001 RAL-757 1921 chr3R 18559509 18559519 chr3R 18559657 18559667 5 147 1.0 6.5 3.8 1.0 158 chr3R 18559509 intergenic CG7691 + chr3R 18559588 intergenic CG7691 + chr3R 18559667 intergenic CG7691 + chr3R_5_18555001 chr3R_18555001 RAL-757 1922 chr3R 18606503 18606534 chr3R 18610735 18610765 F-element 16 4230 5.5 8.0 6.8 2.1 4262 chr3R 18606503 intron,intron qin +,CG14304 - chr3R 18608634 intron,intron qin +,CG14304 - chr3R 18610765 intron,intron qin +,CG14304 - chr3R_16_18605001 chr3R_18605001 RAL-757 1923 chr3R 18617714 18617741 chr3R 18617794 18617821 9 80 6.0 4.0 5.0 1.5 107 chr3R 18617714 intron,intron qin +,CG14304 - chr3R 18617768 intron,intron qin +,CG14304 - chr3R 18617821 intron,intron qin +,CG14304 - chr3R_9_18615001 chr3R_18615001 RAL-757 1924 chr3R 18670380 18670409 chr3R 18670473 18670502 17 89 5.0 7.0 6.0 2.4 122 chr3R 18670380 intron CG7702 + chr3R 18670441 intron CG7702 + chr3R 18670502 intron CG7702 + chr3R_17_18670001 chr3R_18670001 RAL-757 1925 chr3R 18716898 18716927 chr3R 18717048 18717077 15 147 4.0 3.0 3.5 3.3 179 chr3R 18716898 intron,3` UTR Cha +,VAChT + chr3R 18716988 intron,3` UTR Cha +,VAChT + chr3R 18717077 intron,3` UTR Cha +,VAChT + chr3R_15_18715001 chr3R_18715001 RAL-757 1926 chr3R 18730025 18730037 chr3R 18730101 18730103 4 71 3.5 3.0 3.2 1.0 78 chr3R 18730025 intron Cha + chr3R 18730064 intron Cha + chr3R 18730103 intron Cha + chr3R_4_18730001 chr3R_18730001 RAL-757 1927 chr3R 18766775 18766808 chr3R 18766853 18766883 17 76 5.5 6.5 6.0 2.4 108 chr3R 18766775 intron CG7720 - chr3R 18766829 intron CG7720 - chr3R 18766883 intron CG7720 - chr3R_17_18765001 chr3R_18765001 RAL-757 1928 chr3R 18770300 18770320 chr3R 18770374 18770402 6 78 3.0 5.0 4.0 1.2 102 chr3R 18770300 intron CG7720 - chr3R 18770351 intron CG7720 - chr3R 18770402 intron CG7720 - chr3R_6_18770001 chr3R_18770001 RAL-757 1929 chr3R 18784912 18784944 chr3R 18785006 18785038 12 92 4.0 2.5 3.2 2.9 126 chr3R 18784912 intron CG7720 - chr3R 18784975 intron CG7720 - chr3R 18785038 intron CG7720 - chr3R_12_18780001 chr3R_18780001 RAL-757 1930 chr3R 18791511 18791526 chr3R 18791574 18791575 6 60 1.0 1.5 1.2 2.7 64 chr3R 18791511 intron CG7720 - chr3R 18791543 intron CG7720 - chr3R 18791575 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-757 1931 chr3R 18792803 18792827 chr3R 18792886 18792900 6 81 6.0 0.0 3.0 1.5 97 chr3R 18792803 intron CG7720 - chr3R 18792852 intron CG7720 - chr3R 18792900 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-757 1932 chr3R 18812078 18812100 chr3R 18812156 18812178 17 76 4.5 6.5 5.5 2.6 100 chr3R 18812078 intron CG18208 - chr3R 18812128 intron CG18208 - chr3R 18812178 intron CG18208 - chr3R_17_18810001 chr3R_18810001 RAL-757 1933 chr3R 18812102 18812108 chr3R 18812153 18812186 6 73 4.0 6.5 5.2 1.0 84 chr3R 18812102 intron CG18208 - chr3R 18812144 intron CG18208 - chr3R 18812186 intron CG18208 - chr3R_6_18810001 chr3R_18810001 RAL-757 1934 chr3R 18817506 18817535 chr3R 18817604 18817619 16 96 4.5 3.0 3.8 3.3 113 chr3R 18817506 intron CG18208 - chr3R 18817562 intron CG18208 - chr3R 18817619 intron CG18208 - chr3R_16_18815001 chr3R_18815001 RAL-757 1935 chr3R 18827883 18827915 chr3R 18827958 18827986 4 78 3.0 1.5 2.2 1.2 103 chr3R 18827883 intron CG18208 - chr3R 18827934 intron CG18208 - chr3R 18827986 intron CG18208 - chr3R_4_18825001 chr3R_18825001 RAL-757 1936 chr3R 18848809 18848831 chr3R 18848889 18848911 6 78 3.5 4.0 3.8 1.2 102 chr3R 18848809 5` UTR CG18208 - chr3R 18848860 5` UTR CG18208 - chr3R 18848911 5` UTR CG18208 - chr3R_6_18845001 chr3R_18845001 RAL-757 1937 chr3R 18870826 18870858 chr3R 18870913 18870942 9 85 6.0 4.5 5.2 1.5 116 chr3R 18870826 intergenic not near genes chr3R 18870884 intergenic not near genes chr3R 18870942 intergenic not near genes chr3R_9_18870001 chr3R_18870001 RAL-757 1938 chr3R 18873891 18873921 chr3R 18874009 18874037 5 118 2.5 4.5 3.5 1.1 146 chr3R 18873891 intergenic not near genes chr3R 18873964 intergenic not near genes chr3R 18874037 intergenic not near genes chr3R_5_18870001 chr3R_18870001 RAL-757 1939 chr3R 18879918 18879926 chr3R 18879992 18880002 5 76 0.5 0.0 0.2 4.2 84 chr3R 18879918 intergenic not near genes chr3R 18879960 intergenic not near genes chr3R 18880002 intergenic not near genes chr3R_5_18875001 chr3R_18875001 RAL-757 1940 chr3R 18888102 18888128 chr3R 18888187 18888211 11 84 6.5 3.5 5.0 1.8 109 chr3R 18888102 intergenic not near genes chr3R 18888156 intergenic not near genes chr3R 18888211 intergenic not near genes chr3R_11_18885001 chr3R_18885001 RAL-757 1941 chr3R 19106824 19106852 chr3R 19106914 19106920 5 83 5.5 0.5 3.0 1.2 96 chr3R 19106824 intron CG6040 + chr3R 19106872 intron CG6040 + chr3R 19106920 intron CG6040 + chr3R_5_19105001 chr3R_19105001 RAL-757 1942 chr3R 19139777 19139808 chr3R 19139872 19139902 11 94 4.0 4.5 4.2 2.1 125 chr3R 19139777 3` UTR Ppcs - chr3R 19139840 3` UTR Ppcs - chr3R 19139902 3` UTR Ppcs - chr3R_11_19135001 chr3R_19135001 RAL-757 1943 chr3R 19222863 19222889 chr3R 19223220 19223246 5 355 7.0 5.0 6.0 0.7 383 chr3R 19222863 intron vib - chr3R 19223054 intron vib - chr3R 19223246 intron vib - chr3R_5_19220001 chr3R_19220001 RAL-757 1944 chr3R 19271432 19271445 chr3R 19271517 19271530 5 84 6.5 8.5 7.5 0.6 98 chr3R 19271432 intergenic not near genes chr3R 19271481 intergenic not near genes chr3R 19271530 intergenic not near genes chr3R_5_19270001 chr3R_19270001 RAL-757 1945 chr3R 19276931 19276946 chr3R 19277011 19277026 10 80 6.0 2.5 4.2 1.9 95 chr3R 19276931 intergenic not near genes chr3R 19276978 intergenic not near genes chr3R 19277026 intergenic not near genes chr3R_10_19275001 chr3R_19275001 RAL-757 1946 chr3R 19344685 19344699 chr3R 19344809 19344834 8 134 4.5 5.0 4.8 1.4 149 chr3R 19344685 intergenic not near genes chr3R 19344760 intergenic not near genes chr3R 19344834 intergenic not near genes chr3R_8_19340001 chr3R_19340001 RAL-757 1947 chr3R 19389298 19389332 chr3R 19389443 19389447 13 140 3.0 7.0 5.0 2.2 149 chr3R 19389298 intron,intron Ino80 -,CG3734 + chr3R 19389372 intron,exon Ino80 -,CG3734 + chr3R 19389447 intron,exon Ino80 -,CG3734 + chr3R_13_19385001 chr3R_19385001 RAL-757 1948 chr3R 19602766 19602793 chr3R 19602833 19602871 14 70 7.0 3.0 5.0 2.3 105 chr3R 19602766 intergenic CG7333 + chr3R 19602818 intergenic CG7333 + chr3R 19602871 intergenic CG7333 + chr3R_14_19600001 chr3R_19600001 RAL-757 1949 chr3R 19629595 19629737 chr3R 19629683 19629804 11 85 0.0 0.0 0.0 11.0 209 chr3R 19629595 intron CG6231 - chr3R 19629700 intron CG6231 - chr3R 19629804 intron CG6231 - chr3R_11_19625001 chr3R_19625001 RAL-757 1950 chr3R 19702321 19702354 chr3R 19702402 19702433 10 73 7.5 3.5 5.5 1.5 112 chr3R 19702321 intergenic not near genes chr3R 19702377 intergenic not near genes chr3R 19702433 intergenic not near genes chr3R_10_19700001 chr3R_19700001 RAL-757 1951 chr3R 19735724 19735739 chr3R 19735820 19735842 8 101 1.0 8.0 4.5 1.5 118 chr3R 19735724 intron GluClalpha + chr3R 19735783 intron GluClalpha + chr3R 19735842 intron GluClalpha + chr3R_8_19735001 chr3R_19735001 RAL-757 1952 chr3R 19874987 19875010 chr3R 19875060 19875084 8 72 3.0 8.0 5.5 1.2 97 chr3R 19874987 intron CG4562 - chr3R 19875036 intron CG4562 - chr3R 19875084 intron CG4562 - chr3R_8_19875001 chr3R_19875001 RAL-757 1953 chr3R 19952411 19952444 chr3R 19954209 19954242 13 1804 34.5 31.5 33.0 0.4 1831 chr3R 19952411 intron Hs6st - chr3R 19953326 intron Hs6st - chr3R 19954242 intron Hs6st - chr3R_13_19950001 chr3R_19950001 RAL-757 1954 chr3R 19977797 19977827 chr3R 19977877 19977907 4 80 3.0 5.5 4.2 0.8 110 chr3R 19977797 intron,exon Hs6st -,CG31213 + chr3R 19977852 intron,exon Hs6st -,CG31213 + chr3R 19977907 intron,exon Hs6st -,CG31213 + chr3R_4_19975001 chr3R_19975001 RAL-757 1955 chr3R 20041130 20041137 chr3R 20041213 20041228 5 96 5.0 4.0 4.5 0.9 98 chr3R 20041130 intron CG17193 - chr3R 20041179 intron CG17193 - chr3R 20041228 intron CG17193 - chr3R_5_20040001 chr3R_20040001 RAL-757 1956 chr3R 20041138 20041148 chr3R 20041212 20041250 6 95 2.5 4.0 3.2 1.4 112 chr3R 20041138 intron CG17193 - chr3R 20041194 intron CG17193 - chr3R 20041250 intron CG17193 - chr3R_6_20040001 chr3R_20040001 RAL-757 1957 chr3R 20077035 20077068 chr3R 20077121 20077154 10 85 3.5 4.0 3.8 2.1 119 chr3R 20077035 intergenic not near genes chr3R 20077094 intergenic not near genes chr3R 20077154 intergenic not near genes chr3R_10_20075001 chr3R_20075001 RAL-757 1958 chr3R 20109552 20109569 chr3R 20114748 20114748 copia 8 5199 2.5 5.5 4.0 1.6 5196 chr3R 20109552 intergenic not near genes chr3R 20112150 intergenic not near genes chr3R 20114748 intergenic CG10887 + chr3R_8_20110001 chr3R_20110001 RAL-757 1959 chr3R 20156704 20156708 chr3R 20165861 20165878 roo 5 9163 8.5 5.5 7.0 0.6 9174 chr3R 20156704 intergenic not near genes chr3R 20161291 intergenic not near genes chr3R 20165878 intergenic not near genes chr3R_5_20160001 chr3R_20160001 RAL-757 1960 chr3R 20156709 20156723 chr3R 20165860 20165893 roo 11 9163 4.5 5.0 4.8 1.9 9184 chr3R 20156709 intergenic not near genes chr3R 20161301 intergenic not near genes chr3R 20165893 intergenic not near genes chr3R_11_20160001 chr3R_20160001 RAL-757 1961 chr3R 20195238 20195251 chr3R 20195317 20195322 6 79 6.0 7.0 6.5 0.8 84 chr3R 20195238 intergenic not near genes chr3R 20195280 intergenic not near genes chr3R 20195322 intergenic not near genes chr3R_6_20195001 chr3R_20195001 RAL-757 1962 chr3R 20197114 20197150 chr3R 20197190 20197227 21 71 1.0 3.0 2.0 7.0 113 chr3R 20197114 intergenic not near genes chr3R 20197170 intergenic not near genes chr3R 20197227 intergenic not near genes chr3R_21_20195001 chr3R_20195001 RAL-757 1963 chr3R 20205563 20205587 chr3R 20205685 20205709 10 122 9.0 4.5 6.8 1.3 146 chr3R 20205563 intron Nlg4 + chr3R 20205636 intron Nlg4 + chr3R 20205709 intron Nlg4 + chr3R_10_20205001 chr3R_20205001 RAL-757 1964 chr3R 20245289 20245306 chr3R 20248887 20248911 F-element 9 3606 5.0 1.5 3.2 2.1 3622 chr3R 20245289 3` UTR Nlg4 + chr3R 20247100 intergenic not near genes chr3R 20248911 intergenic not near genes chr3R_9_20245001 chr3R_20245001 RAL-757 1965 chr3R 20266521 20266549 chr3R 20272986 20273008 Burdock 13 6467 1.0 6.0 3.5 2.9 6487 chr3R 20266521 intron cic + chr3R 20269764 intron cic + chr3R 20273008 intron cic + chr3R_13_20265001 chr3R_20265001 RAL-757 1966 chr3R 20282275 20282309 chr3R 20282351 20282385 11 75 1.0 6.0 3.5 2.4 110 chr3R 20282275 intron cic + chr3R 20282330 intron cic + chr3R 20282385 intron cic + chr3R_11_20280001 chr3R_20280001 RAL-757 1967 chr3R 20330999 20331011 chr3R 20331485 20331487 roo 4 482 10.5 8.5 9.5 0.4 488 chr3R 20330999 intergenic Sirt2 + chr3R 20331243 intergenic Sirt2 + chr3R 20331487 intergenic not near genes chr3R_4_20330001 chr3R_20330001 RAL-757 1968 chr3R 20331012 20331026 chr3R 20331483 20331512 roo 10 481 7.0 8.0 7.5 1.2 500 chr3R 20331012 intergenic Sirt2 + chr3R 20331262 intergenic Sirt2 + chr3R 20331512 intergenic not near genes chr3R_10_20330001 chr3R_20330001 RAL-757 1969 chr3R 20345394 20345400 chr3R 20345473 20345489 4 86 0.0 0.5 0.2 3.3 95 chr3R 20345394 intergenic not near genes chr3R 20345442 intergenic not near genes chr3R 20345489 intergenic not near genes chr3R_4_20345001 chr3R_20345001 RAL-757 1970 chr3R 20434846 20434857 chr3R 20435031 20435042 6 185 3.0 2.5 2.8 1.6 196 chr3R 20434846 intron Gfrl - chr3R 20434944 intron Gfrl - chr3R 20435042 intron Gfrl - chr3R_6_20430001 chr3R_20430001 RAL-757 1971 chr3R 20499824 20499839 chr3R 20499893 20499893 8 75 6.5 3.0 4.8 1.4 69 chr3R 20499824 intergenic Dic2 - chr3R 20499858 intergenic Dic2 - chr3R 20499893 intergenic Dic2 - chr3R_8_20495001 chr3R_20495001 RAL-757 1972 chr3R 20513002 20513033 chr3R 20515705 20515736 opus 14 2702 7.0 5.0 6.0 2.0 2734 chr3R 20513002 intergenic not near genes chr3R 20514369 intergenic not near genes chr3R 20515736 intergenic not near genes chr3R_14_20510001 chr3R_20510001 RAL-757 1973 chr3R 20594482 20594513 chr3R 20594572 20594603 13 90 4.0 0.0 2.0 4.3 121 chr3R 20594482 intron bon + chr3R 20594542 intron bon + chr3R 20594603 intron bon + chr3R_13_20590001 chr3R_20590001 RAL-757 1974 chr3R 20705188 20705218 chr3R 20705600 20705630 16 410 4.5 5.5 5.0 2.7 442 chr3R 20705188 intron Oamb - chr3R 20705409 intron Oamb - chr3R 20705630 intron Oamb - chr3R_16_20705001 chr3R_20705001 RAL-757 1975 chr3R 20722857 20722884 chr3R 20722984 20723009 4 126 2.5 0.0 1.2 1.8 152 chr3R 20722857 intergenic not near genes chr3R 20722933 intergenic not near genes chr3R 20723009 intergenic not near genes chr3R_4_20720001 chr3R_20720001 RAL-757 1976 chr3R 20771707 20771731 chr3R 20771781 20771811 16 79 0.0 8.5 4.2 3.1 104 chr3R 20771707 intron,intron Syp +,Takl1 - chr3R 20771759 intron,intron Syp +,Takl1 - chr3R 20771811 intron,exon Syp +,Takl1 - chr3R_16_20770001 chr3R_20770001 RAL-757 1977 chr3R 20854496 20854519 chr3R 20859285 20859304 Doc 4 4786 14.5 4.0 9.2 0.4 4808 chr3R 20854496 intron Ir93a - chr3R 20856900 intron Ir93a - chr3R 20859304 exon Ir93a - chr3R_4_20855001 chr3R_20855001 RAL-757 1978 chr3R 20870260 20870282 chr3R 20870334 20870345 12 72 3.5 5.0 4.2 2.3 85 chr3R 20870260 intergenic not near genes chr3R 20870302 intergenic not near genes chr3R 20870345 intergenic not near genes chr3R_12_20870001 chr3R_20870001 RAL-757 1979 chr3R 20899914 20899942 chr3R 20900009 20900038 7 95 4.0 3.5 3.8 1.5 124 chr3R 20899914 intergenic not near genes chr3R 20899976 intergenic not near genes chr3R 20900038 intergenic not near genes chr3R_7_20895001 chr3R_20895001 RAL-757 1980 chr3R 20901655 20901684 chr3R 20901757 20901763 15 100 4.5 5.0 4.8 2.6 108 chr3R 20901655 intergenic CG5621 + chr3R 20901709 intergenic CG5621 + chr3R 20901763 intergenic CG5621 + chr3R_15_20900001 chr3R_20900001 RAL-757 1981 chr3R 20937123 20937156 chr3R 20937384 20937414 13 256 1.5 6.5 4.0 2.6 291 chr3R 20937123 intron CG31191 - chr3R 20937268 intron CG31191 - chr3R 20937414 intron CG31191 - chr3R_13_20935001 chr3R_20935001 RAL-757 1982 chr3R 21074806 21074829 chr3R 21075023 21075043 7 217 4.0 6.0 5.0 1.2 237 chr3R 21074806 intron dmrt93B + chr3R 21074924 intron dmrt93B + chr3R 21075043 intron dmrt93B + chr3R_7_21070001 chr3R_21070001 RAL-757 1983 chr3R 21132632 21132636 chr3R 21132715 21132719 5 83 6.0 0.0 3.0 1.2 87 chr3R 21132632 3` UTR Ice2 + chr3R 21132676 3` UTR Ice2 + chr3R 21132719 3` UTR Ice2 + chr3R_5_21130001 chr3R_21130001 RAL-757 1984 chr3R 21141695 21141706 chr3R 21150161 21150173 Tirant 4 8465 0.5 9.0 4.8 0.7 8478 chr3R 21141695 intron SNF4Agamma + chr3R 21145934 intron SNF4Agamma + chr3R 21150173 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-757 1985 chr3R 21154549 21154586 chr3R 21154754 21154801 10 210 5.0 0.0 2.5 2.9 252 chr3R 21154549 intron SNF4Agamma + chr3R 21154675 intron SNF4Agamma + chr3R 21154801 intron SNF4Agamma + chr3R_10_21150001 chr3R_21150001 RAL-757 1986 chr3R 21163249 21163277 chr3R 21163327 21163355 11 74 7.0 7.0 7.0 1.4 106 chr3R 21163249 intron SNF4Agamma + chr3R 21163302 intron SNF4Agamma + chr3R 21163355 intron SNF4Agamma + chr3R_11_21160001 chr3R_21160001 RAL-757 1987 chr3R 21169837 21169840 chr3R 21169912 21169927 6 86 13.5 8.5 11.0 0.5 90 chr3R 21169837 intron SNF4Agamma + chr3R 21169882 intron SNF4Agamma + chr3R 21169927 intron SNF4Agamma + chr3R_6_21165001 chr3R_21165001 RAL-757 1988 chr3R 21176824 21176841 chr3R 21176890 21176924 8 72 2.5 6.0 4.2 1.5 100 chr3R 21176824 intron SNF4Agamma + chr3R 21176874 intron SNF4Agamma + chr3R 21176924 intron SNF4Agamma + chr3R_8_21175001 chr3R_21175001 RAL-757 1989 chr3R 21214744 21214765 chr3R 21214916 21214937 10 171 2.5 2.0 2.2 3.1 193 chr3R 21214744 intergenic CG5862 + chr3R 21214840 intergenic CG5862 + chr3R 21214937 intergenic CG5862 + chr3R_10_21210001 chr3R_21210001 RAL-757 1990 chr3R 21321496 21321530 chr3R 21321592 21321626 17 94 4.0 1.0 2.5 4.9 130 chr3R 21321496 intron CG16791 - chr3R 21321561 intron CG16791 - chr3R 21321626 intron CG16791 - chr3R_17_21320001 chr3R_21320001 RAL-757 1991 chr3R 21330870 21330880 chr3R 21330961 21330963 6 89 9.5 2.0 5.8 0.9 93 chr3R 21330870 intron CG16791 - chr3R 21330916 intron CG16791 - chr3R 21330963 intron CG16791 - chr3R_6_21330001 chr3R_21330001 RAL-757 1992 chr3R 21330883 21330899 chr3R 21330959 21330990 7 82 4.5 2.0 3.2 1.7 107 chr3R 21330883 intron CG16791 - chr3R 21330936 intron CG16791 - chr3R 21330990 intron CG16791 - chr3R_7_21330001 chr3R_21330001 RAL-757 1993 chr3R 21383273 21383299 chr3R 21383353 21383373 8 78 0.5 1.0 0.8 4.4 100 chr3R 21383273 intergenic not near genes chr3R 21383323 intergenic not near genes chr3R 21383373 intergenic not near genes chr3R_8_21380001 chr3R_21380001 RAL-757 1994 chr3R 21408855 21408879 chr3R 21408922 21408958 10 75 1.0 5.5 3.2 2.4 103 chr3R 21408855 intergenic CheB93b + chr3R 21408906 intergenic CheB93b + chr3R 21408958 intergenic CheB93b + chr3R_10_21405001 chr3R_21405001 RAL-757 1995 chr3R 21464405 21464425 chr3R 21464490 21464509 7 85 4.5 1.0 2.8 1.8 104 chr3R 21464405 intergenic not near genes chr3R 21464457 intergenic not near genes chr3R 21464509 intergenic not near genes chr3R_7_21460001 chr3R_21460001 RAL-757 1996 chr3R 21472026 21472034 chr3R 21472107 21472115 6 80 2.5 7.5 5.0 1.0 89 chr3R 21472026 intergenic not near genes chr3R 21472070 intergenic not near genes chr3R 21472115 intergenic not near genes chr3R_6_21470001 chr3R_21470001 RAL-757 1997 chr3R 21481389 21481402 chr3R 21481480 21481485 4 87 8.5 0.5 4.5 0.7 96 chr3R 21481389 intergenic not near genes chr3R 21481437 intergenic not near genes chr3R 21481485 intergenic not near genes chr3R_4_21480001 chr3R_21480001 RAL-757 1998 chr3R 21518256 21518266 chr3R 21518340 21518350 6 82 0.0 6.0 3.0 1.5 94 chr3R 21518256 intergenic not near genes chr3R 21518303 intergenic not near genes chr3R 21518350 intergenic not near genes chr3R_6_21515001 chr3R_21515001 RAL-757 1999 chr3R 21519987 21520005 chr3R 21520088 21520104 9 99 4.0 3.0 3.5 2.0 117 chr3R 21519987 intergenic not near genes chr3R 21520046 intergenic not near genes chr3R 21520104 intergenic not near genes chr3R_9_21520001 chr3R_21520001 RAL-757 2000 chr3R 21520006 21520137 chr3R 21520087 21520231 8 96 4.5 3.0 3.8 1.7 225 chr3R 21520006 intergenic not near genes chr3R 21520118 intergenic not near genes chr3R 21520231 intergenic not near genes chr3R_8_21520001 chr3R_21520001 RAL-757 2001 chr3R 21761149 21761155 chr3R 21768526 21768527 mdg1 4 7383 5.0 10.5 7.8 0.5 7378 chr3R 21761149 exon CG42335 + chr3R 21764838 intron CG42335 + chr3R 21768527 exon CG42335 + chr3R_4_21760001 chr3R_21760001 RAL-757 2002 chr3R 21845706 21845712 chr3R 21845766 21845782 8 74 0.0 12.0 6.0 1.1 76 chr3R 21845706 5` UTR,exon CR44087 +,Gr93d - chr3R 21845744 5` UTR,exon CR44087 +,Gr93d - chr3R 21845782 5` UTR,exon CR44087 +,Gr93d - chr3R_8_21845001 chr3R_21845001 RAL-757 2003 chr3R 21337427 21337429 chr3R 21907534 21907534 6 570105 6.0 29.5 17.8 0.3 570107 chr3R 21337427 intron CG16791 - chr3R 21622480 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_6_21620001 chr3R_21620001 RAL-757 2004 chr3R 21907534 21907534 chr3R 28831801 28831804 24 6924268 34.0 21.0 27.5 0.8 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_24_25365001 chr3R_25365001 RAL-757 2005 chr3R 21907535 21907535 chr3R 28831801 28831803 57 6924266 34.0 21.0 27.5 2.0 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_57_25365001 chr3R_25365001 RAL-757 2006 chr3R 17389054 17389056 chr3R 21907536 21907536 4 4518482 12.5 30.0 21.2 0.2 4518482 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648295 5` UTR CG6195 - chr3R 21907536 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-757 2007 chr3R 21907536 21907536 chr3R 28831801 28831804 50 6924266 34.0 21.0 27.5 1.8 6924268 chr3R 21907536 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831804 intron WASp - chr3R_50_25365001 chr3R_25365001 RAL-757 2008 chr3R 21907536 21907536 chr3R 29013339 29013340 5 7105804 34.0 20.0 27.0 0.2 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_5_25460001 chr3R_25460001 RAL-757 2009 chr3R 21918997 21919017 chr3R 21919077 21919097 14 79 0.5 5.0 2.8 3.7 100 chr3R 21918997 intergenic not near genes chr3R 21919047 intergenic not near genes chr3R 21919097 intergenic not near genes chr3R_14_21915001 chr3R_21915001 RAL-757 2010 chr3R 21937229 21937234 chr3R 21937306 21937311 7 76 3.5 5.0 4.2 1.3 82 chr3R 21937229 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937311 intergenic not near genes chr3R_7_21935001 chr3R_21935001 RAL-757 2011 chr3R 21952133 21952167 chr3R 21952218 21952252 27 83 5.0 2.5 3.8 5.6 119 chr3R 21952133 intron Eip93F + chr3R 21952192 intron Eip93F + chr3R 21952252 intron Eip93F + chr3R_27_21950001 chr3R_21950001 RAL-757 2012 chr3R 21985248 21985257 chr3R 21985353 21985362 4 104 3.5 5.0 4.2 0.8 114 chr3R 21985248 intron Eip93F + chr3R 21985305 intron Eip93F + chr3R 21985362 intron Eip93F + chr3R_4_21985001 chr3R_21985001 RAL-757 2013 chr3R 22057520 22057536 chr3R 22057598 22057614 14 77 7.5 9.0 8.2 1.5 94 chr3R 22057520 intron how + chr3R 22057567 intron how + chr3R 22057614 intron how + chr3R_14_22055001 chr3R_22055001 RAL-757 2014 chr3R 22117422 22117448 chr3R 22117493 22117524 12 75 4.5 4.5 4.5 2.2 102 chr3R 22117422 intergenic Ir94b -,Ir94c - chr3R 22117473 intergenic Ir94c -,Ir94b - chr3R 22117524 intergenic Ir94c -,Ir94b - chr3R_12_22115001 chr3R_22115001 RAL-757 2015 chr3R 22157515 22157551 chr3R 22157615 22157626 9 91 2.5 6.0 4.2 1.7 111 chr3R 22157515 intron SKIP + chr3R 22157570 intron SKIP + chr3R 22157626 intron SKIP + chr3R_9_22155001 chr3R_22155001 RAL-757 2016 chr3R 22234687 22234715 chr3R 22236006 22236034 pogo 15 1314 5.0 7.5 6.2 2.1 1347 chr3R 22234687 intron SKIP + chr3R 22235360 intron SKIP + chr3R 22236034 intron SKIP + chr3R_15_22235001 chr3R_22235001 RAL-757 2017 chr3R 22239491 22239505 chr3R 22248551 22248559 roo 9 9058 9.0 0.0 4.5 1.6 9068 chr3R 22239491 intron SKIP + chr3R 22244025 intron SKIP + chr3R 22248559 intron SKIP + chr3R_9_22240001 chr3R_22240001 RAL-757 2018 chr3R 22450543 22450578 chr3R 22453183 22453203 NOF 7 2633 4.0 7.0 5.5 1.1 2660 chr3R 22450543 intron CG34376 + chr3R 22451873 intron CG34376 + chr3R 22453203 intron CG34376 + chr3R_7_22450001 chr3R_22450001 RAL-757 2019 chr3R 22507789 22507813 chr3R 22507873 22507897 5 78 2.5 4.5 3.5 1.1 108 chr3R 22507789 intron Octbeta1R + chr3R 22507843 intron Octbeta1R + chr3R 22507897 intron Octbeta1R + chr3R_5_22505001 chr3R_22505001 RAL-757 2020 chr3R 22507814 22507820 chr3R 22507872 22507887 5 70 1.5 4.0 2.8 1.3 73 chr3R 22507814 intron Octbeta1R + chr3R 22507850 intron Octbeta1R + chr3R 22507887 intron Octbeta1R + chr3R_5_22505001 chr3R_22505001 RAL-757 2021 chr3R 22582469 22582479 chr3R 22583448 22583466 4 978 17.0 16.0 16.5 0.2 997 chr3R 22582469 exon Dph5 - chr3R 22582968 intron Dph5 - chr3R 22583466 3` UTR CG33107 - chr3R_4_22580001 chr3R_22580001 RAL-757 2022 chr3R 22582483 22582489 chr3R 22583443 22583476 5 975 16.5 17.5 17.0 0.3 993 chr3R 22582483 exon Dph5 - chr3R 22582980 intron Dph5 - chr3R 22583476 exon CG33107 - chr3R_5_22580001 chr3R_22580001 RAL-757 2023 chr3R 22582428 22582453 chr3R 22583408 22583449 14 984 16.0 17.0 16.5 0.8 1021 chr3R 22582428 exon Dph5 - chr3R 22582938 intron Dph5 - chr3R 22583449 3` UTR CG33107 - chr3R_14_22580001 chr3R_22580001 RAL-757 2024 chr3R 22597377 22597406 chr3R 22597454 22597455 7 67 3.5 1.0 2.2 2.2 78 chr3R 22597377 intron Efa6 + chr3R 22597416 intron Efa6 + chr3R 22597455 intron Efa6 + chr3R_7_22595001 chr3R_22595001 RAL-757 2025 chr3R 22640369 22640404 chr3R 22640451 22640462 14 76 2.0 2.0 2.0 4.7 93 chr3R 22640369 intron wake + chr3R 22640416 intron wake + chr3R 22640462 intron wake + chr3R_14_22640001 chr3R_22640001 RAL-757 2026 chr3R 22657710 22657746 chr3R 22657795 22657831 7 85 0.0 0.0 0.0 7.0 121 chr3R 22657710 intron wake + chr3R 22657770 intron wake + chr3R 22657831 intron wake + chr3R_7_22655001 chr3R_22655001 RAL-757 2027 chr3R 22672321 22672334 chr3R 22672403 22672427 7 87 0.5 7.0 3.8 1.5 106 chr3R 22672321 intron wake + chr3R 22672374 intron wake + chr3R 22672427 intron wake + chr3R_7_22670001 chr3R_22670001 RAL-757 2028 chr3R 22769097 22769102 chr3R 22769170 22769179 4 76 11.0 5.0 8.0 0.4 82 chr3R 22769097 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769138 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769179 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_4_22765001 chr3R_22765001 RAL-757 2029 chr3R 22769103 22769125 chr3R 22769168 22769183 12 65 5.5 5.0 5.2 1.9 80 chr3R 22769103 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769143 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769183 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_12_22765001 chr3R_22765001 RAL-757 2030 chr3R 22797759 22797935 chr3R 22797845 22798028 21 88 0.5 1.0 0.8 11.7 269 chr3R 22797759 intergenic not near genes chr3R 22797894 intergenic not near genes chr3R 22798028 intergenic not near genes chr3R_21_22795001 chr3R_22795001 RAL-757 2031 chr3R 22802905 22802932 chr3R 22802985 22803007 16 75 1.0 10.0 5.5 2.5 102 chr3R 22802905 intergenic not near genes chr3R 22802956 intergenic not near genes chr3R 22803007 intergenic not near genes chr3R_16_22800001 chr3R_22800001 RAL-757 2032 chr3R 22825519 22825534 chr3R 22825589 22825591 5 75 1.5 4.5 3.0 1.2 72 chr3R 22825519 3` UTR CR44350 - chr3R 22825555 3` UTR CR44350 - chr3R 22825591 3` UTR CR44350 - chr3R_5_22825001 chr3R_22825001 RAL-757 2033 chr3R 22835604 22835633 chr3R 22838445 22838475 14 2845 33.0 11.0 22.0 0.6 2871 chr3R 22835604 intergenic not near genes chr3R 22837040 intergenic not near genes chr3R 22838475 intergenic not near genes chr3R_14_22835001 chr3R_22835001 RAL-757 2034 chr3R 23020747 23020757 chr3R 23020816 23020840 8 78 3.0 5.0 4.0 1.6 93 chr3R 23020747 intergenic lmd - chr3R 23020794 intergenic lmd - chr3R 23020840 intergenic lmd - chr3R_8_23020001 chr3R_23020001 RAL-757 2035 chr3R 23073659 23073683 chr3R 23073744 23073771 12 84 7.0 3.0 5.0 2.0 112 chr3R 23073659 intron CG13830 - chr3R 23073715 intron CG13830 - chr3R 23073771 intron CG13830 - chr3R_12_23070001 chr3R_23070001 RAL-757 2036 chr3R 23079060 23079085 chr3R 23079173 23079205 14 116 8.0 4.0 6.0 2.0 145 chr3R 23079060 intron CG13830 - chr3R 23079132 intron CG13830 - chr3R 23079205 intron CG13830 - chr3R_14_23075001 chr3R_23075001 RAL-757 2037 chr3R 23101267 23101292 chr3R 23101550 23101573 5 281 7.0 4.0 5.5 0.8 306 chr3R 23101267 intron CG13830 - chr3R 23101420 intron CG13830 - chr3R 23101573 intron CG13830 - chr3R_5_23100001 chr3R_23100001 RAL-757 2038 chr3R 23363672 23363700 chr3R 23363757 23363786 20 83 12.0 4.0 8.0 2.2 114 chr3R 23363672 intergenic CG4408 - chr3R 23363729 intergenic CG4408 - chr3R 23363786 intergenic CG4408 - chr3R_20_23360001 chr3R_23360001 RAL-757 2039 chr3R 23558399 23558426 chr3R 23560179 23560207 Bari1 16 1780 8.5 4.5 6.5 2.1 1808 chr3R 23558399 intron beat-IV + chr3R 23559303 intron beat-IV + chr3R 23560207 intron beat-IV + chr3R_16_23555001 chr3R_23555001 RAL-757 2040 chr3R 23572756 23572778 chr3R 23572875 23572888 4 117 1.5 5.0 3.2 1.0 132 chr3R 23572756 intron beat-IV + chr3R 23572822 intron beat-IV + chr3R 23572888 intron beat-IV + chr3R_4_23570001 chr3R_23570001 RAL-757 2041 chr3R 23752869 23752902 chr3R 23752947 23752980 10 74 2.5 8.0 5.2 1.6 111 chr3R 23752869 intergenic Rpt5 +,RanBP3 - chr3R 23752924 5` UTR Rpt5 + chr3R 23752980 5` UTR Rpt5 + chr3R_10_23750001 chr3R_23750001 RAL-757 2042 chr3R 23835407 23835436 chr3R 23844557 23844585 roo 15 9147 6.5 6.5 6.5 2.0 9178 chr3R 23835407 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844585 intron CG34355 + chr3R_15_23835001 chr3R_23835001 RAL-757 2043 chr3R 23888083 23888115 chr3R 23888167 23888199 18 84 8.0 2.0 5.0 3.0 116 chr3R 23888083 intron Pli - chr3R 23888141 intron Pli - chr3R 23888199 intron Pli - chr3R_18_23885001 chr3R_23885001 RAL-757 2044 chr3R 23944911 23944926 chr3R 23944996 23945011 8 85 10.0 8.0 9.0 0.8 100 chr3R 23944911 intron CG12268 - chr3R 23944961 intron CG12268 - chr3R 23945011 intron CG12268 - chr3R_8_23940001 chr3R_23940001 RAL-757 2045 chr3R 23949041 23949069 chr3R 23949118 23949146 10 72 4.0 9.0 6.5 1.3 105 chr3R 23949041 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949146 intergenic not near genes chr3R_10_23945001 chr3R_23945001 RAL-757 2046 chr3R 24072084 24072115 chr3R 24072522 24072532 jockey 7 431 2.5 6.5 4.5 1.3 448 chr3R 24072084 intron 4EHP - chr3R 24072308 intron 4EHP - chr3R 24072532 intron 4EHP - chr3R_7_24070001 chr3R_24070001 RAL-757 2047 chr3R 24076919 24076946 chr3R 24078386 24078411 hobo 6 1464 4.0 5.5 4.8 1.0 1492 chr3R 24076919 intron 4EHP - chr3R 24077665 intron 4EHP - chr3R 24078411 intron 4EHP - chr3R_6_24075001 chr3R_24075001 RAL-757 2048 chr3R 24207217 24207246 chr3R 24212293 24212322 flea 14 5074 10.5 8.5 9.5 1.3 5105 chr3R 24207217 intron twin - chr3R 24209770 intron twin - chr3R 24212322 intron twin - chr3R_14_24205001 chr3R_24205001 RAL-757 2049 chr3R 24214590 24214626 chr3R 24214676 24214712 20 84 3.5 3.0 3.2 4.8 122 chr3R 24214590 intron twin - chr3R 24214651 intron,3` UTR twin -,CG17786 - chr3R 24214712 intron,3` UTR twin -,CG17786 - chr3R_20_24210001 chr3R_24210001 RAL-757 2050 chr3R 24284830 24284839 chr3R 24285038 24285049 10 210 1.0 8.5 4.8 1.7 219 chr3R 24284830 exon CG6356 + chr3R 24284940 intron CG6356 + chr3R 24285049 intron CG6356 + chr3R_10_24280001 chr3R_24280001 RAL-757 2051 chr3R 24295962 24295975 chr3R 24296079 24296091 5 116 14.0 6.5 10.2 0.4 129 chr3R 24295962 intron crb + chr3R 24296026 intron crb + chr3R 24296091 intron crb + chr3R_5_24295001 chr3R_24295001 RAL-757 2052 chr3R 24295976 24295996 chr3R 24296078 24296113 15 111 5.5 6.5 6.0 2.1 137 chr3R 24295976 intron crb + chr3R 24296044 intron crb + chr3R 24296113 intron crb + chr3R_15_24295001 chr3R_24295001 RAL-757 2053 chr3R 24304005 24304039 chr3R 24304085 24304119 19 79 4.5 3.0 3.8 4.0 114 chr3R 24304005 intron crb + chr3R 24304062 intron crb + chr3R 24304119 intron crb + chr3R_19_24300001 chr3R_24300001 RAL-757 2054 chr3R 24493275 24493514 chr3R 24493503 24493588 BS 13 136 0.5 0.5 0.5 8.7 313 chr3R 24493275 intergenic not near genes chr3R 24493432 intergenic not near genes chr3R 24493588 intergenic not near genes chr3R_13_24490001 chr3R_24490001 RAL-757 2055 chr3R 24527802 24527818 chr3R 24527893 24527909 9 91 8.5 4.0 6.2 1.2 107 chr3R 24527802 intergenic CG6607 +,CG13618 + chr3R 24527856 intergenic CG6607 +,CG13618 + chr3R 24527909 intergenic CG6607 +,CG13618 + chr3R_9_24525001 chr3R_24525001 RAL-757 2056 chr3R 24667605 24667633 chr3R 24667682 24667710 15 75 1.5 0.0 0.8 8.3 105 chr3R 24667605 intron slo + chr3R 24667658 intron slo + chr3R 24667710 intron slo + chr3R_15_24665001 chr3R_24665001 RAL-757 2057 chr3R 24670057 24670198 chr3R 24670167 24670283 23 102 0.5 0.0 0.2 19.2 226 chr3R 24670057 intron slo + chr3R 24670170 intron slo + chr3R 24670283 intron slo + chr3R_23_24670001 chr3R_24670001 RAL-757 2058 chr3R 24730115 24730120 chr3R 24732467 24732498 Doc 4 2366 3.5 3.0 3.2 1.0 2383 chr3R 24730115 intron tok + chr3R 24731306 intron tok + chr3R 24732498 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-757 2059 chr3R 24787549 24787561 chr3R 24787625 24787636 4 76 4.5 3.0 3.8 0.8 87 chr3R 24787549 intergenic CG5805 - chr3R 24787592 intergenic CG5805 -,Ets96B + chr3R 24787636 intergenic CG5805 -,Ets96B + chr3R_4_24785001 chr3R_24785001 RAL-757 2060 chr3R 24927131 24927155 chr3R 24931913 24931946 Doc 13 4787 6.0 3.5 4.8 2.2 4815 chr3R 24927131 intergenic Trf4-2 + chr3R 24929538 intergenic not near genes chr3R 24931946 intergenic CG11771 + chr3R_13_24925001 chr3R_24925001 RAL-757 2061 chr3R 24974913 24974936 chr3R 24974991 24975015 14 76 4.0 10.0 7.0 1.8 102 chr3R 24974913 intergenic not near genes chr3R 24974964 intergenic not near genes chr3R 24975015 intergenic not near genes chr3R_14_24970001 chr3R_24970001 RAL-757 2062 chr3R 25004900 25004920 chr3R 25004983 25005003 13 83 6.5 3.0 4.8 2.2 103 chr3R 25004900 intron tnc + chr3R 25004952 intron tnc + chr3R 25005003 intron tnc + chr3R_13_25000001 chr3R_25000001 RAL-757 2063 chr3R 25027542 25027568 chr3R 25027749 25027766 16 208 5.0 4.5 4.8 2.8 224 chr3R 25027542 intron Hr96 + chr3R 25027654 intron Hr96 + chr3R 25027766 intron Hr96 + chr3R_16_25025001 chr3R_25025001 RAL-757 2064 chr3R 25208901 25208924 chr3R 25208972 25209003 7 78 6.0 2.5 4.2 1.3 102 chr3R 25208901 intron CG13654 + chr3R 25208952 intron CG13654 + chr3R 25209003 intron CG13654 + chr3R_7_25205001 chr3R_25205001 RAL-757 2065 chr3R 25209596 25209628 chr3R 25209678 25209682 21 79 7.0 3.0 5.0 3.5 86 chr3R 25209596 intron CG13654 + chr3R 25209639 intron CG13654 + chr3R 25209682 intron CG13654 + chr3R_21_25205001 chr3R_25205001 RAL-757 2066 chr3R 25296171 25296196 chr3R 25296251 25296256 11 76 7.5 10.0 8.8 1.1 85 chr3R 25296171 3` UTR CG31097 - chr3R 25296214 3` UTR CG31097 - chr3R 25296256 3` UTR CG31097 - chr3R_11_25295001 chr3R_25295001 RAL-757 2067 chr3R 25545109 25545141 chr3R 25545197 25545216 14 85 5.0 4.5 4.8 2.4 107 chr3R 25545109 intron msi + chr3R 25545162 intron msi + chr3R 25545216 intron msi + chr3R_14_25545001 chr3R_25545001 RAL-757 2068 chr3R 25551820 25551833 chr3R 25551887 25551904 10 73 3.0 8.5 5.8 1.5 84 chr3R 25551820 intron msi + chr3R 25551862 intron msi + chr3R 25551904 intron msi + chr3R_10_25550001 chr3R_25550001 RAL-757 2069 chr3R 25551834 25551836 chr3R 25551884 25551888 4 60 1.0 7.0 4.0 0.8 54 chr3R 25551834 intron msi + chr3R 25551861 intron msi + chr3R 25551888 intron msi + chr3R_4_25550001 chr3R_25550001 RAL-757 2070 chr3R 25588081 25588091 chr3R 25588159 25588169 5 78 7.0 5.5 6.2 0.7 88 chr3R 25588081 intron msi + chr3R 25588125 intron msi + chr3R 25588169 intron msi + chr3R_5_25585001 chr3R_25585001 RAL-757 2071 chr3R 25588092 25588104 chr3R 25588155 25588182 7 67 3.5 5.0 4.2 1.3 90 chr3R 25588092 intron msi + chr3R 25588137 intron msi + chr3R 25588182 intron msi + chr3R_7_25585001 chr3R_25585001 RAL-757 2072 chr3R 25652324 25652349 chr3R 25652393 25652426 10 74 5.0 4.0 4.5 1.8 102 chr3R 25652324 intergenic not near genes chr3R 25652375 intergenic not near genes chr3R 25652426 intergenic not near genes chr3R_10_25650001 chr3R_25650001 RAL-757 2073 chr3R 25725827 25725862 chr3R 25734987 25735022 roo 11 9155 3.0 3.0 3.0 2.8 9195 chr3R 25725827 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735022 intron LpR2 - chr3R_11_25730001 chr3R_25730001 RAL-757 2074 chr3R 25738639 25738665 chr3R 25738720 25738753 16 82 3.5 4.0 3.8 3.3 114 chr3R 25738639 intron LpR2 - chr3R 25738696 intron LpR2 - chr3R 25738753 intron LpR2 - chr3R_16_25735001 chr3R_25735001 RAL-757 2075 chr3R 25759586 25759619 chr3R 25759742 25759775 4 156 2.5 2.5 2.5 1.1 189 chr3R 25759586 intron LpR1 - chr3R 25759680 intron LpR1 - chr3R 25759775 intron LpR1 - chr3R_4_25755001 chr3R_25755001 RAL-757 2076 chr3R 25765881 25765911 chr3R 25765958 25765962 8 71 5.5 4.0 4.8 1.4 81 chr3R 25765881 intergenic not near genes chr3R 25765922 intergenic not near genes chr3R 25765962 intergenic not near genes chr3R_8_25765001 chr3R_25765001 RAL-757 2077 chr3R 25801271 25801293 chr3R 25802255 25802277 12 982 3.0 6.0 4.5 2.2 1006 chr3R 25801271 intergenic not near genes chr3R 25801774 intergenic not near genes chr3R 25802277 intergenic not near genes chr3R_12_25800001 chr3R_25800001 RAL-757 2078 chr3R 25823981 25824019 chr3R 25824165 25824177 17 178 3.0 6.5 4.8 2.9 196 chr3R 25823981 3` UTR CR44949 - chr3R 25824079 3` UTR CR44949 - chr3R 25824177 3` UTR CR44949 - chr3R_17_25820001 chr3R_25820001 RAL-757 2079 chr3R 25843635 25843665 chr3R 25843765 25843795 18 129 1.5 7.5 4.5 3.3 160 chr3R 25843635 intergenic CR45653 + chr3R 25843715 intergenic CR45653 + chr3R 25843795 intergenic CR45653 + chr3R_18_25840001 chr3R_25840001 RAL-757 2080 chr3R 25927510 25927539 chr3R 25927586 25927616 21 79 4.0 1.5 2.8 5.5 106 chr3R 25927510 intron CCAP-R - chr3R 25927563 intron CCAP-R - chr3R 25927616 intron CCAP-R - chr3R_21_25925001 chr3R_25925001 RAL-757 2081 chr3R 26038967 26038996 chr3R 26039104 26039131 12 136 8.5 2.5 5.5 1.8 164 chr3R 26038967 intergenic not near genes chr3R 26039049 intergenic not near genes chr3R 26039131 intergenic not near genes chr3R_12_26035001 chr3R_26035001 RAL-757 2082 chr3R 26061736 26061762 chr3R 26061833 26061859 12 97 2.5 7.0 4.8 2.1 123 chr3R 26061736 intron CG14551 - chr3R 26061798 intron CG14551 - chr3R 26061859 intron CG14551 - chr3R_12_26060001 chr3R_26060001 RAL-757 2083 chr3R 26126561 26126569 chr3R 26126645 26126655 4 85 5.0 11.5 8.2 0.4 94 chr3R 26126561 intron CG31324 + chr3R 26126608 intron CG31324 + chr3R 26126655 intron CG31324 + chr3R_4_26125001 chr3R_26125001 RAL-757 2084 chr3R 26165330 26165363 chr3R 26165431 26165465 12 95 4.5 5.0 4.8 2.1 135 chr3R 26165330 intergenic not near genes chr3R 26165398 intergenic not near genes chr3R 26165465 intergenic not near genes chr3R_12_26165001 chr3R_26165001 RAL-757 2085 chr3R 26166182 26166209 chr3R 26166258 26166289 12 75 4.5 6.0 5.2 1.9 107 chr3R 26166182 intergenic not near genes chr3R 26166236 intergenic not near genes chr3R 26166289 intergenic not near genes chr3R_12_26165001 chr3R_26165001 RAL-757 2086 chr3R 26234885 26234913 chr3R 26235161 26235189 14 274 5.0 4.5 4.8 2.4 304 chr3R 26234885 intergenic CG12290 +,CR42745 + chr3R 26235037 intergenic CR42745 +,CG12290 + chr3R 26235189 intergenic CR42745 +,CG12290 + chr3R_14_26235001 chr3R_26235001 RAL-757 2087 chr3R 26292107 26292116 chr3R 26292187 26292196 6 80 5.5 9.0 7.2 0.7 89 chr3R 26292107 intergenic not near genes chr3R 26292152 intergenic not near genes chr3R 26292196 intergenic not near genes chr3R_6_26290001 chr3R_26290001 RAL-757 2088 chr3R 26292118 26292141 chr3R 26292186 26292210 12 77 2.0 9.0 5.5 1.8 92 chr3R 26292118 intergenic not near genes chr3R 26292164 intergenic not near genes chr3R 26292210 intergenic not near genes chr3R_12_26290001 chr3R_26290001 RAL-757 2089 chr3R 26294728 26294748 chr3R 26294795 26294807 8 70 4.5 1.5 3.0 2.0 79 chr3R 26294728 intergenic not near genes chr3R 26294768 intergenic not near genes chr3R 26294807 intergenic not near genes chr3R_8_26290001 chr3R_26290001 RAL-757 2090 chr3R 26376324 26376355 chr3R 26385484 26385514 roo 9 9158 5.0 4.0 4.5 1.6 9190 chr3R 26376324 intergenic not near genes chr3R 26380919 intergenic not near genes chr3R 26385514 intergenic not near genes chr3R_9_26380001 chr3R_26380001 RAL-757 2091 chr3R 26405927 26405937 chr3R 26406003 26406013 4 74 2.0 2.0 2.0 1.3 86 chr3R 26405927 intergenic not near genes chr3R 26405970 intergenic not near genes chr3R 26406013 intergenic not near genes chr3R_4_26405001 chr3R_26405001 RAL-757 2092 chr3R 26442397 26442429 chr3R 26442517 26442539 7 115 1.0 3.0 2.0 2.3 142 chr3R 26442397 intron tx + chr3R 26442468 intron tx + chr3R 26442539 intron tx + chr3R_7_26440001 chr3R_26440001 RAL-757 2093 chr3R 26444351 26444376 chr3R 26444429 26444454 9 77 8.5 6.5 7.5 1.1 103 chr3R 26444351 intron tx + chr3R 26444402 intron tx + chr3R 26444454 intron tx + chr3R_9_26440001 chr3R_26440001 RAL-757 2094 chr3R 26482356 26482389 chr3R 26482434 26482448 10 74 9.5 6.5 8.0 1.1 92 chr3R 26482356 intron plum - chr3R 26482402 intron plum - chr3R 26482448 intron plum - chr3R_10_26480001 chr3R_26480001 RAL-757 2095 chr3R 26533109 26533139 chr3R 26533236 26533238 8 122 2.5 5.0 3.8 1.7 129 chr3R 26533109 intron plum - chr3R 26533174 intron plum - chr3R 26533238 intron plum - chr3R_8_26530001 chr3R_26530001 RAL-757 2096 chr3R 26541010 26541032 chr3R 26541078 26541103 13 75 1.5 5.0 3.2 3.1 93 chr3R 26541010 intron scrib + chr3R 26541056 intron scrib + chr3R 26541103 intron scrib + chr3R_13_26540001 chr3R_26540001 RAL-757 2097 chr3R 26542046 26542079 chr3R 26542135 26542170 5 83 1.5 2.0 1.8 1.8 124 chr3R 26542046 intron scrib + chr3R 26542108 intron scrib + chr3R 26542170 intron scrib + chr3R_5_26540001 chr3R_26540001 RAL-757 2098 chr3R 26558336 26558349 chr3R 26565640 26565661 Stalker4 7 7308 6.0 3.0 4.5 1.3 7325 chr3R 26558336 intron scrib + chr3R 26561998 intron scrib + chr3R 26565661 intron scrib + chr3R_7_26560001 chr3R_26560001 RAL-757 2099 chr3R 26558350 26558352 chr3R 26565638 26565664 Stalker4 4 7304 6.0 3.0 4.5 0.7 7314 chr3R 26558350 intron scrib + chr3R 26562007 intron scrib + chr3R 26565664 intron scrib + chr3R_4_26560001 chr3R_26560001 RAL-757 2100 chr3R 26611357 26611372 chr3R 26611417 26611448 4 70 1.5 3.5 2.5 1.1 91 chr3R 26611357 intergenic not near genes chr3R 26611402 intergenic not near genes chr3R 26611448 intergenic not near genes chr3R_4_26610001 chr3R_26610001 RAL-757 2101 chr3R 26642729 26642761 chr3R 26643122 26643151 jockey 18 388 8.5 5.0 6.8 2.3 422 chr3R 26642729 intergenic not near genes chr3R 26642940 intergenic not near genes chr3R 26643151 intergenic not near genes chr3R_18_26640001 chr3R_26640001 RAL-757 2102 chr3R 26698848 26698868 chr3R 26698916 26698946 10 74 2.0 5.0 3.5 2.2 98 chr3R 26698848 3` UTR amon - chr3R 26698897 3` UTR amon - chr3R 26698946 3` UTR amon - chr3R_10_26695001 chr3R_26695001 RAL-757 2103 chr3R 26740306 26740321 chr3R 26740366 26740393 14 70 1.5 2.5 2.0 4.7 87 chr3R 26740306 intergenic not near genes chr3R 26740350 intergenic not near genes chr3R 26740393 intergenic not near genes chr3R_14_26740001 chr3R_26740001 RAL-757 2104 chr3R 26810553 26810586 chr3R 26811038 26811071 roo 13 483 6.5 5.0 5.8 1.9 518 chr3R 26810553 intron Tl + chr3R 26810812 intron Tl + chr3R 26811071 intron Tl + chr3R_13_26810001 chr3R_26810001 RAL-757 2105 chr3R 26814657 26814685 chr3R 26814733 26814740 12 70 4.5 6.0 5.2 1.9 83 chr3R 26814657 intron Tl + chr3R 26814698 intron Tl + chr3R 26814740 intron Tl + chr3R_12_26810001 chr3R_26810001 RAL-757 2106 chr3R 26845584 26845606 chr3R 26845656 26845684 5 77 2.5 5.5 4.0 1.0 100 chr3R 26845584 intron Lerp - chr3R 26845634 intron Lerp - chr3R 26845684 intron Lerp - chr3R_5_26845001 chr3R_26845001 RAL-757 2107 chr3R 27007405 27007438 chr3R 27016540 27016559 roo 18 9131 3.5 13.0 8.2 2.0 9154 chr3R 27007405 intron RYa-R + chr3R 27011982 intron RYa-R + chr3R 27016559 intron RYa-R + chr3R_18_27010001 chr3R_27010001 RAL-757 2108 chr3R 27027688 27027720 chr3R 27027764 27027779 5 73 4.0 2.5 3.2 1.2 91 chr3R 27027688 intron RYa-R + chr3R 27027734 intron RYa-R + chr3R 27027779 intron RYa-R + chr3R_5_27025001 chr3R_27025001 RAL-757 2109 chr3R 27028723 27028755 chr3R 27028802 27028828 17 76 4.5 5.0 4.8 2.9 105 chr3R 27028723 intron RYa-R + chr3R 27028776 intron RYa-R + chr3R 27028828 intron RYa-R + chr3R_17_27025001 chr3R_27025001 RAL-757 2110 chr3R 27140517 27140547 chr3R 27148124 27148157 412 12 7606 2.0 5.0 3.5 2.7 7640 chr3R 27140517 intron CG6051 - chr3R 27144337 intron CG6051 - chr3R 27148157 intron CG6051 - chr3R_12_27140001 chr3R_27140001 RAL-757 2111 chr3R 27301274 27301307 chr3R 27301360 27301394 29 85 6.5 5.5 6.0 4.1 120 chr3R 27301274 intron CG3339 - chr3R 27301334 intron CG3339 - chr3R 27301394 intron CG3339 - chr3R_29_27300001 chr3R_27300001 RAL-757 2112 chr3R 27329475 27329496 chr3R 27329550 27329568 5 76 6.0 1.5 3.8 1.0 93 chr3R 27329475 intergenic CG3330 - chr3R 27329522 intergenic CG3330 - chr3R 27329568 intergenic CG3330 - chr3R_5_27325001 chr3R_27325001 RAL-757 2113 chr3R 27342791 27342825 chr3R 27351372 27351406 Tirant 18 8580 6.0 7.5 6.8 2.3 8615 chr3R 27342791 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351406 intron CG42534 + chr3R_18_27345001 chr3R_27345001 RAL-757 2114 chr3R 27385690 27385719 chr3R 27385960 27385988 4 265 2.5 5.5 4.0 0.8 298 chr3R 27385690 intron side - chr3R 27385839 intron side - chr3R 27385988 intron side - chr3R_4_27385001 chr3R_27385001 RAL-757 2115 chr3R 27492377 27492408 chr3R 27492464 27492493 9 85 2.5 1.0 1.8 3.2 116 chr3R 27492377 intergenic not near genes chr3R 27492435 intergenic not near genes chr3R 27492493 intergenic not near genes chr3R_9_27490001 chr3R_27490001 RAL-757 2116 chr3R 27520169 27520194 chr3R 27520245 27520272 6 76 4.0 8.5 6.2 0.8 103 chr3R 27520169 intergenic not near genes chr3R 27520220 intergenic not near genes chr3R 27520272 intergenic not near genes chr3R_6_27520001 chr3R_27520001 RAL-757 2117 chr3R 27521163 27521180 chr3R 27530366 27530389 roo 6 9207 4.5 6.0 5.2 1.0 9226 chr3R 27521163 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530389 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-757 2118 chr3R 27546385 27546393 chr3R 27546657 27546683 5 284 4.5 5.0 4.8 0.9 298 chr3R 27546385 exon Gr98d + chr3R 27546534 exon Gr98d + chr3R 27546683 exon Gr98d + chr3R_5_27545001 chr3R_27545001 RAL-757 2119 chr3R 27577413 27577438 chr3R 27577492 27577516 10 78 4.5 8.5 6.5 1.3 103 chr3R 27577413 intron wdb - chr3R 27577464 intron wdb - chr3R 27577516 intron wdb - chr3R_10_27575001 chr3R_27575001 RAL-757 2120 chr3R 27627090 27627105 chr3R 27627191 27627206 5 101 8.0 7.5 7.8 0.6 116 chr3R 27627090 intron Tusp + chr3R 27627148 intron Tusp + chr3R 27627206 intron Tusp + chr3R_5_27625001 chr3R_27625001 RAL-757 2121 chr3R 27627115 27627120 chr3R 27627188 27627222 4 92 3.0 6.5 4.8 0.7 107 chr3R 27627115 intron Tusp + chr3R 27627168 intron Tusp + chr3R 27627222 intron Tusp + chr3R_4_27625001 chr3R_27625001 RAL-757 2122 chr3R 27705359 27705386 chr3R 27705438 27705445 5 72 5.5 1.5 3.5 1.1 86 chr3R 27705359 exon CG12428 - chr3R 27705402 intron CG12428 - chr3R 27705445 intron CG12428 - chr3R_5_27705001 chr3R_27705001 RAL-757 2123 chr3R 27725568 27725595 chr3R 27731010 27731019 I-element 13 5440 7.5 7.5 7.5 1.5 5451 chr3R 27725568 intergenic not near genes chr3R 27728294 intergenic not near genes chr3R 27731019 intergenic not near genes chr3R_13_27725001 chr3R_27725001 RAL-757 2124 chr3R 27765922 27765954 chr3R 27766128 27766160 4 199 4.5 3.0 3.8 0.8 238 chr3R 27765922 intergenic not near genes chr3R 27766041 intergenic not near genes chr3R 27766160 intergenic not near genes chr3R_4_27765001 chr3R_27765001 RAL-757 2125 chr3R 27789084 27789115 chr3R 27789156 27789167 7 68 1.0 2.0 1.5 2.8 83 chr3R 27789084 exon CG34353 - chr3R 27789126 intron CG34353 - chr3R 27789167 intron CG34353 - chr3R_7_27785001 chr3R_27785001 RAL-757 2126 chr3R 27799942 27799964 chr3R 27800023 27800046 9 80 5.0 5.5 5.2 1.5 104 chr3R 27799942 intron CG34353 - chr3R 27799994 intron CG34353 - chr3R 27800046 intron CG34353 - chr3R_9_27795001 chr3R_27795001 RAL-757 2127 chr3R 27820033 27820053 chr3R 27820119 27820139 8 86 2.0 1.0 1.5 3.2 106 chr3R 27820033 intron CG34353 - chr3R 27820086 intron CG34353 - chr3R 27820139 intron CG34353 - chr3R_8_27820001 chr3R_27820001 RAL-757 2128 chr3R 27856759 27856771 chr3R 27858242 27858253 hopper2 4 1482 14.0 4.5 9.2 0.4 1494 chr3R 27856759 intron CG34353 - chr3R 27857506 intron CG34353 - chr3R 27858253 intron CG34353 - chr3R_4_27855001 chr3R_27855001 RAL-757 2129 chr3R 27856779 27856787 chr3R 27858241 27858255 hopper2 5 1475 8.0 4.5 6.2 0.7 1476 chr3R 27856779 intron CG34353 - chr3R 27857517 intron CG34353 - chr3R 27858255 intron CG34353 - chr3R_5_27855001 chr3R_27855001 RAL-757 2130 chr3R 27862954 27862986 chr3R 27868258 27868291 Transpac 9 5303 8.0 3.0 5.5 1.4 5337 chr3R 27862954 intron CG34353 - chr3R 27865622 intron CG34353 - chr3R 27868291 intron CG34353 - chr3R_9_27865001 chr3R_27865001 RAL-757 2131 chr3R 27875700 27875733 chr3R 27882755 27882776 297 24 7052 4.5 6.5 5.5 3.7 7076 chr3R 27875700 intron CG34353 - chr3R 27879238 intron CG34353 - chr3R 27882776 intron CG34353 - chr3R_24_27875001 chr3R_27875001 RAL-757 2132 chr3R 27904620 27904630 chr3R 27904697 27904710 5 80 11.5 2.5 7.0 0.6 90 chr3R 27904620 intron CG34353 - chr3R 27904665 intron CG34353 - chr3R 27904710 intron CG34353 - chr3R_5_27900001 chr3R_27900001 RAL-757 2133 chr3R 27942701 27942717 chr3R 27942842 27942869 9 143 46.0 35.0 40.5 0.2 168 chr3R 27942701 exon CG5514 + chr3R 27942785 intergenic CG5514 +,mfrn - chr3R 27942869 3` UTR mfrn - chr3R_9_27940001 chr3R_27940001 RAL-757 2134 chr3R 27973853 27973876 chr3R 27973934 27973957 12 81 5.0 4.5 4.8 2.1 104 chr3R 27973853 intron betaTub97EF - chr3R 27973905 intron betaTub97EF - chr3R 27973957 intron betaTub97EF - chr3R_12_27970001 chr3R_27970001 RAL-757 2135 chr3R 28017946 28017982 chr3R 28018037 28018073 4 88 1.0 1.5 1.2 1.8 127 chr3R 28017946 intergenic not near genes chr3R 28018010 intergenic not near genes chr3R 28018073 intergenic not near genes chr3R_4_28015001 chr3R_28015001 RAL-757 2136 chr3R 28068496 28068506 chr3R 28073937 28073944 I-element 5 5441 8.0 6.0 7.0 0.6 5448 chr3R 28068496 intron CG34362 + chr3R 28071220 intron CG34362 + chr3R 28073944 intron CG34362 + chr3R_5_28070001 chr3R_28070001 RAL-757 2137 chr3R 28068507 28068519 chr3R 28073936 28073960 I-element 5 5437 7.5 6.0 6.8 0.6 5453 chr3R 28068507 intron CG34362 + chr3R 28071234 intron CG34362 + chr3R 28073960 intron CG34362 + chr3R_5_28070001 chr3R_28070001 RAL-757 2138 chr3R 28068520 28068532 chr3R 28073930 28073954 I-element 6 5432 6.0 4.5 5.2 1.0 5434 chr3R 28068520 intron CG34362 + chr3R 28071237 intron CG34362 + chr3R 28073954 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-757 2139 chr3R 28131428 28131459 chr3R 28131610 28131641 13 177 4.0 2.5 3.2 3.1 213 chr3R 28131428 intergenic not near genes chr3R 28131534 intergenic not near genes chr3R 28131641 intergenic not near genes chr3R_13_28130001 chr3R_28130001 RAL-757 2140 chr3R 28173673 28173702 chr3R 28181103 28181131 mdg1 4 7430 1.0 5.5 3.2 1.0 7458 chr3R 28173673 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181131 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-757 2141 chr3R 28253339 28253372 chr3R 28255841 28255877 jockey 15 2503 3.5 4.0 3.8 3.1 2538 chr3R 28253339 intergenic not near genes chr3R 28254608 intergenic not near genes chr3R 28255877 intergenic not near genes chr3R_15_28250001 chr3R_28250001 RAL-757 2142 chr3R 28283001 28283006 chr3R 28283624 28283635 5 627 13.5 9.0 11.2 0.4 634 chr3R 28283001 exon CG34436 + chr3R 28283318 exon CG34436 + chr3R 28283635 intergenic CG34437 +,CG34436 + chr3R_5_28280001 chr3R_28280001 RAL-757 2143 chr3R 28283008 28283019 chr3R 28283615 28283647 6 625 9.0 3.0 6.0 0.9 639 chr3R 28283008 exon CG34436 + chr3R 28283328 exon CG34436 + chr3R 28283647 intergenic CG34437 +,CG34436 + chr3R_6_28280001 chr3R_28280001 RAL-757 2144 chr3R 28302103 28302138 chr3R 28302541 28302549 jockey 13 435 11.0 7.5 9.2 1.3 446 chr3R 28302103 intergenic not near genes chr3R 28302326 intergenic not near genes chr3R 28302549 intergenic not near genes chr3R_13_28300001 chr3R_28300001 RAL-757 2145 chr3R 28331505 28331529 chr3R 28331584 28331608 9 79 3.0 1.0 2.0 3.0 103 chr3R 28331505 intron larp - chr3R 28331556 intron larp - chr3R 28331608 intron larp - chr3R_9_28330001 chr3R_28330001 RAL-757 2146 chr3R 28345648 28345671 chr3R 28345724 28345735 12 72 7.0 4.5 5.8 1.8 87 chr3R 28345648 intergenic Moca-cyp + chr3R 28345692 intergenic not near genes chr3R 28345735 intergenic not near genes chr3R_12_28345001 chr3R_28345001 RAL-757 2147 chr3R 28410986 28411004 chr3R 28411077 28411096 4 92 9.0 1.5 5.2 0.6 110 chr3R 28410986 intergenic not near genes chr3R 28411041 intergenic not near genes chr3R 28411096 intergenic not near genes chr3R_4_28410001 chr3R_28410001 RAL-757 2148 chr3R 28424172 28424201 chr3R 28424261 28424284 16 87 3.0 2.5 2.8 4.2 112 chr3R 28424172 intron beat-VI + chr3R 28424228 intron beat-VI + chr3R 28424284 intron beat-VI + chr3R_16_28420001 chr3R_28420001 RAL-757 2149 chr3R 28441985 28442017 chr3R 28442078 28442099 8 91 21.5 14.0 17.8 0.4 114 chr3R 28441985 intron beat-VI + chr3R 28442042 intron beat-VI + chr3R 28442099 intron beat-VI + chr3R_8_28440001 chr3R_28440001 RAL-757 2150 chr3R 28484353 28484372 chr3R 28486270 28486292 66 1920 135.0 164.5 149.8 0.4 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_66_28485001 chr3R_28485001 RAL-757 2151 chr3R 28594120 28594129 chr3R 28594189 28594207 7 71 1.5 8.5 5.0 1.2 87 chr3R 28594120 5` UTR CR43440 + chr3R 28594164 5` UTR CR43440 + chr3R 28594207 5` UTR CR43440 + chr3R_7_28590001 chr3R_28590001 RAL-757 2152 chr3R 28616474 28616499 chr3R 28616568 28616570 14 89 5.0 3.5 4.2 2.7 96 chr3R 28616474 intron CG10011 - chr3R 28616522 intron CG10011 - chr3R 28616570 intron CG10011 - chr3R_14_28615001 chr3R_28615001 RAL-757 2153 chr3R 28633191 28633221 chr3R 28633271 28633290 14 77 7.0 4.5 5.8 2.1 99 chr3R 28633191 intron CG10011 - chr3R 28633240 intron CG10011 - chr3R 28633290 intron CG10011 - chr3R_14_28630001 chr3R_28630001 RAL-757 2154 chr3R 28662368 28662402 chr3R 28662523 28662555 18 152 2.0 5.5 3.8 3.8 187 chr3R 28662368 intergenic not near genes chr3R 28662462 intergenic not near genes chr3R 28662555 intergenic not near genes chr3R_18_28660001 chr3R_28660001 RAL-757 2155 chr3R 28686736 28686764 chr3R 28686816 28686846 9 81 7.0 7.5 7.2 1.1 110 chr3R 28686736 intron CG9990 + chr3R 28686791 intron CG9990 + chr3R 28686846 intron CG9990 + chr3R_9_28685001 chr3R_28685001 RAL-757 2156 chr3R 28763907 28763922 chr3R 28771348 28771365 Stalker4 6 7443 0.0 3.5 1.8 2.1 7458 chr3R 28763907 intergenic not near genes chr3R 28767636 intergenic not near genes chr3R 28771365 intergenic not near genes chr3R_6_28765001 chr3R_28765001 RAL-757 2157 chr3R 28792883 28792902 chr3R 28797967 28797973 jockey 10 5085 3.5 4.5 4.0 2.0 5090 chr3R 28792883 intergenic not near genes chr3R 28795428 intergenic not near genes chr3R 28797973 intergenic not near genes chr3R_10_28795001 chr3R_28795001 RAL-757 2158 chr3R 28811573 28811591 chr3R 28811716 28811734 8 142 4.0 6.5 5.2 1.3 161 chr3R 28811573 intergenic wdn - chr3R 28811654 intergenic wdn -,CG1646 + chr3R 28811734 intergenic CG1646 +,wdn - chr3R_8_28810001 chr3R_28810001 RAL-757 2159 chr3R 21907535 21907536 chr3R 28831798 28831798 7 6924263 34.0 20.5 27.2 0.2 6924263 chr3R 21907535 intergenic CG6678 + chr3R 25369666 intron Fur1 - chr3R 28831798 intron WASp - chr3R_7_25365001 chr3R_25365001 RAL-757 2160 chr3R 21907534 21907536 chr3R 28831799 28831804 119 6924266 34.0 21.0 27.5 4.2 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_119_25365001 chr3R_25365001 RAL-757 2161 chr3R 21907534 21907536 chr3R 29013340 29013340 7 7105806 34.0 20.0 27.0 0.2 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_7_25460001 chr3R_25460001 RAL-757 2162 chr3R 29079379 29079411 chr3R 29080751 29080783 NOF 21 1370 5.0 4.5 4.8 3.6 1404 chr3R 29079379 intron CG11873 + chr3R 29080081 intron CG11873 + chr3R 29080783 intron CG11873 + chr3R_21_29080001 chr3R_29080001 RAL-757 2163 chr3R 29090759 29090782 chr3R 29090875 29090875 7 111 5.0 5.5 5.2 1.1 116 chr3R 29090759 intron CG11873 + chr3R 29090817 intron CG11873 + chr3R 29090875 intron CG11873 + chr3R_7_29090001 chr3R_29090001 RAL-757 2164 chr3R 29168494 29168507 chr3R 29168582 29168595 9 86 6.0 5.5 5.8 1.3 101 chr3R 29168494 intron CG11898 + chr3R 29168544 intron CG11898 + chr3R 29168595 intron CG11898 + chr3R_9_29165001 chr3R_29165001 RAL-757 2165 chr3R 29213059 29213091 chr3R 29213142 29213173 18 81 7.5 5.5 6.5 2.4 114 chr3R 29213059 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213173 intergenic not near genes chr3R_18_29210001 chr3R_29210001 RAL-757 2166 chr3R 29237282 29237285 chr3R 29239279 29239306 5 2006 27.0 7.0 17.0 0.3 2024 chr3R 29237282 exon CG11951 - chr3R 29238294 intron CG11951 - chr3R 29239306 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-757 2167 chr3R 29238776 29238790 chr3R 29238890 29238904 4 114 3.0 9.0 6.0 0.6 128 chr3R 29238776 intergenic CG31427 -,CG11951 - chr3R 29238840 3` UTR CG31427 - chr3R 29238904 3` UTR CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-757 2168 chr3R 29240475 29240498 chr3R 29240558 29240582 16 83 2.5 4.0 3.2 3.8 107 chr3R 29240475 intergenic CG31445 -,CG31427 - chr3R 29240528 intergenic CG31445 -,CG31427 - chr3R 29240582 3` UTR CG31445 - chr3R_16_29240001 chr3R_29240001 RAL-757 2169 chr3R 29256265 29256300 chr3R 29256345 29256380 10 77 6.0 5.0 5.5 1.5 115 chr3R 29256265 intergenic CG45544 +,stg - chr3R 29256322 intergenic CG45544 + chr3R 29256380 intergenic CG45544 + chr3R_10_29255001 chr3R_29255001 RAL-757 2170 chr3R 29319827 29319860 chr3R 29320140 29320169 jockey 17 314 4.0 5.5 4.8 2.9 342 chr3R 29319827 intergenic Cnx99A - chr3R 29319998 intergenic Cnx99A - chr3R 29320169 intergenic not near genes chr3R_17_29315001 chr3R_29315001 RAL-757 2171 chr3R 29335389 29335418 chr3R 29335529 29335545 11 134 2.5 4.0 3.2 2.6 156 chr3R 29335389 intergenic not near genes chr3R 29335467 intergenic not near genes chr3R 29335545 intergenic not near genes chr3R_11_29335001 chr3R_29335001 RAL-757 2172 chr3R 29355955 29355990 chr3R 29356034 29356040 9 72 3.5 4.0 3.8 1.9 85 chr3R 29355955 intergenic CR45547 - chr3R 29355998 intergenic CR45547 - chr3R 29356040 intergenic CR45547 - chr3R_9_29355001 chr3R_29355001 RAL-757 2173 chr3R 29406624 29406643 chr3R 29407904 29407928 jockey 12 1279 2.5 6.0 4.2 2.3 1304 chr3R 29406624 intron Ptp99A + chr3R 29407276 intron Ptp99A + chr3R 29407928 intron Ptp99A + chr3R_12_29405001 chr3R_29405001 RAL-757 2174 chr3R 29447829 29447849 chr3R 29447929 29447956 4 104 2.0 6.0 4.0 0.8 127 chr3R 29447829 intron Ptp99A + chr3R 29447892 intron Ptp99A + chr3R 29447956 intron Ptp99A + chr3R_4_29445001 chr3R_29445001 RAL-757 2175 chr3R 29453753 29453786 chr3R 29453829 29453861 10 75 0.5 6.0 3.2 2.4 108 chr3R 29453753 intron Ptp99A + chr3R 29453807 intron Ptp99A + chr3R 29453861 intron Ptp99A + chr3R_10_29450001 chr3R_29450001 RAL-757 2176 chr3R 29472011 29472020 chr3R 29472103 29472108 5 91 4.5 5.5 5.0 0.8 97 chr3R 29472011 intron Ptp99A + chr3R 29472060 intron Ptp99A + chr3R 29472108 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-757 2177 chr3R 29474427 29474464 chr3R 29474514 29474551 15 86 2.0 4.0 3.0 3.8 124 chr3R 29474427 intron Ptp99A + chr3R 29474489 intron Ptp99A + chr3R 29474551 intron Ptp99A + chr3R_15_29470001 chr3R_29470001 RAL-757 2178 chr3R 29505894 29505925 chr3R 29505971 29505987 9 74 5.5 2.5 4.0 1.8 93 chr3R 29505894 intergenic not near genes chr3R 29505940 intergenic not near genes chr3R 29505987 intergenic not near genes chr3R_9_29505001 chr3R_29505001 RAL-757 2179 chr3R 29539430 29539457 chr3R 29539506 29539533 6 74 6.5 0.0 3.2 1.4 103 chr3R 29539430 intergenic not near genes chr3R 29539482 intergenic not near genes chr3R 29539533 intergenic not near genes chr3R_6_29535001 chr3R_29535001 RAL-757 2180 chr3R 29624959 29624989 chr3R 29625035 29625065 15 74 6.5 2.5 4.5 2.7 106 chr3R 29624959 intergenic not near genes chr3R 29625012 intergenic not near genes chr3R 29625065 intergenic not near genes chr3R_15_29625001 chr3R_29625001 RAL-757 2181 chr3R 29631533 29631563 chr3R 29631615 29631630 10 77 4.5 9.5 7.0 1.2 97 chr3R 29631533 3` UTR Dop1R2 - chr3R 29631582 3` UTR Dop1R2 - chr3R 29631630 3` UTR Dop1R2 - chr3R_10_29630001 chr3R_29630001 RAL-757 2182 chr3R 29738267 29738300 chr3R 29739729 29739760 hobo 17 1460 2.0 7.0 4.5 3.1 1493 chr3R 29738267 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739760 5` UTR CG1969 + chr3R_17_29735001 chr3R_29735001 RAL-757 2183 chr3R 29754984 29754990 chr3R 29755058 29755067 4 76 0.0 9.0 4.5 0.7 83 chr3R 29754984 intergenic CR44953 -,yata + chr3R 29755026 intergenic CR44953 -,yata + chr3R 29755067 intergenic CR44953 - chr3R_4_29755001 chr3R_29755001 RAL-757 2184 chr3R 29758937 29758970 chr3R 29759015 29759046 12 75 6.5 10.5 8.5 1.3 109 chr3R 29758937 3` UTR CR44953 - chr3R 29758992 3` UTR CR44953 - chr3R 29759046 intergenic CR44953 - chr3R_12_29755001 chr3R_29755001 RAL-757 2185 chr3R 29760366 29760392 chr3R 29761561 29761593 pogo 12 1199 9.0 10.5 9.8 1.1 1227 chr3R 29760366 intergenic not near genes chr3R 29760980 intergenic not near genes chr3R 29761593 intergenic not near genes chr3R_12_29760001 chr3R_29760001 RAL-757 2186 chr3R 29881014 29881029 chr3R 29881100 29881115 9 86 4.0 6.0 5.0 1.5 101 chr3R 29881014 intron CG31038 + chr3R 29881064 intron CG31038 + chr3R 29881115 intron CG31038 + chr3R_9_29880001 chr3R_29880001 RAL-757 2187 chr3R 29881030 29881038 chr3R 29881094 29881124 6 82 1.5 5.0 3.2 1.4 94 chr3R 29881030 intron CG31038 + chr3R 29881077 intron CG31038 + chr3R 29881124 intron CG31038 + chr3R_6_29880001 chr3R_29880001 RAL-757 2188 chr3R 29882021 29882053 chr3R 29891178 29891210 roo 18 9155 11.0 5.5 8.2 2.0 9189 chr3R 29882021 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891210 intron CG31038 + chr3R_18_29885001 chr3R_29885001 RAL-757 2189 chr3R 29963475 29963509 chr3R 29963577 29963591 6 94 2.5 5.0 3.8 1.2 116 chr3R 29963475 intron TkR99D - chr3R 29963533 intron TkR99D - chr3R 29963591 intron TkR99D - chr3R_6_29960001 chr3R_29960001 RAL-757 2190 chr3R 29966067 29966075 chr3R 29966143 29966144 7 75 6.5 13.5 10.0 0.6 77 chr3R 29966067 intron TkR99D - chr3R 29966106 intron TkR99D - chr3R 29966144 intron TkR99D - chr3R_7_29965001 chr3R_29965001 RAL-757 2191 chr3R 30032163 30032182 chr3R 30032242 30032251 8 75 5.0 6.0 5.5 1.2 88 chr3R 30032163 intron Axn + chr3R 30032207 intron Axn + chr3R 30032251 intron Axn + chr3R_8_30030001 chr3R_30030001 RAL-757 2192 chr3R 30075567 30075588 chr3R 30075654 30075677 8 88 2.5 3.0 2.8 2.1 110 chr3R 30075567 intron sima + chr3R 30075622 intron sima + chr3R 30075677 intron sima + chr3R_8_30075001 chr3R_30075001 RAL-757 2193 chr3R 30080464 30080481 chr3R 30080537 30080560 9 78 2.5 2.5 2.5 2.6 96 chr3R 30080464 intron sima + chr3R 30080512 intron sima + chr3R 30080560 intron sima + chr3R_9_30080001 chr3R_30080001 RAL-757 2194 chr3R 30084870 30084885 chr3R 30086329 30086334 hobo 8 1459 0.0 5.5 2.8 2.1 1464 chr3R 30084870 intron sima + chr3R 30085602 intron sima + chr3R 30086334 intron sima + chr3R_8_30085001 chr3R_30085001 RAL-757 2195 chr3R 30238766 30238796 chr3R 30239923 30239960 1360 16 1160 7.0 5.0 6.0 2.3 1194 chr3R 30238766 intergenic not near genes chr3R 30239363 intergenic not near genes chr3R 30239960 intergenic not near genes chr3R_16_30235001 chr3R_30235001 RAL-757 2196 chr3R 30268245 30268448 chr3R 30268324 30268521 10 77 5.0 2.0 3.5 2.2 276 chr3R 30268245 intergenic not near genes chr3R 30268383 intergenic not near genes chr3R 30268521 intergenic not near genes chr3R_10_30265001 chr3R_30265001 RAL-757 2197 chr3R 30298549 30298572 chr3R 30298640 30298654 10 87 0.5 5.0 2.8 2.6 105 chr3R 30298549 intron hdc + chr3R 30298602 intron hdc + chr3R 30298654 intron hdc + chr3R_10_30295001 chr3R_30295001 RAL-757 2198 chr3R 30307139 30307153 chr3R 30307217 30307234 6 80 1.5 8.5 5.0 1.0 95 chr3R 30307139 intron hdc + chr3R 30307186 intron hdc + chr3R 30307234 intron hdc + chr3R_6_30305001 chr3R_30305001 RAL-757 2199 chr3R 30317331 30317346 chr3R 30324923 30324938 roo 4 7590 1.5 3.5 2.5 1.1 7607 chr3R 30317331 intron hdc + chr3R 30321134 intron hdc + chr3R 30324938 intron hdc + chr3R_4_30320001 chr3R_30320001 RAL-757 2200 chr3R 30317348 30317359 chr3R 30324917 30324951 roo 4 7578 0.5 2.5 1.5 1.6 7603 chr3R 30317348 intron hdc + chr3R 30321150 intron hdc + chr3R 30324951 intron hdc + chr3R_4_30320001 chr3R_30320001 RAL-757 2201 chr3R 30332040 30332060 chr3R 30332113 30332116 4 72 4.5 6.0 5.2 0.6 76 chr3R 30332040 intron hdc + chr3R 30332078 intron hdc + chr3R 30332116 intron hdc + chr3R_4_30330001 chr3R_30330001 RAL-757 2202 chr3R 30359366 30359373 chr3R 30359495 30359505 4 131 0.5 4.5 2.5 1.1 139 chr3R 30359366 intron hdc + chr3R 30359436 intron hdc + chr3R 30359505 intron hdc + chr3R_4_30355001 chr3R_30355001 RAL-757 2203 chr3R 30359374 30359386 chr3R 30359494 30359498 7 125 0.0 4.5 2.2 2.2 124 chr3R 30359374 intron hdc + chr3R 30359436 intron hdc + chr3R 30359498 intron hdc + chr3R_7_30355001 chr3R_30355001 RAL-757 2204 chr3R 30375539 30375571 chr3R 30383164 30383196 412 16 7622 7.0 4.0 5.5 2.5 7657 chr3R 30375539 intergenic not near genes chr3R 30379368 intergenic not near genes chr3R 30383196 intergenic not near genes chr3R_16_30375001 chr3R_30375001 RAL-757 2205 chr3R 30396230 30396246 chr3R 30404484 30404512 roo 8 8259 7.5 9.0 8.2 0.9 8282 chr3R 30396230 intergenic not near genes chr3R 30400371 intergenic not near genes chr3R 30404512 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 RAL-757 2206 chr3R 30456394 30456421 chr3R 30456474 30456500 8 76 3.5 7.5 5.5 1.2 106 chr3R 30456394 intergenic CG2224 - chr3R 30456447 3` UTR CG2224 - chr3R 30456500 3` UTR CG2224 - chr3R_8_30455001 chr3R_30455001 RAL-757 2207 chr3R 30458011 30458048 chr3R 30458091 30458125 22 78 4.0 5.5 4.8 3.8 114 chr3R 30458011 intron CG2224 - chr3R 30458068 intron CG2224 - chr3R 30458125 intron CG2224 - chr3R_22_30455001 chr3R_30455001 RAL-757 2208 chr3R 30480475 30480509 chr3R 30482943 30482977 jockey 7 2466 3.0 9.0 6.0 1.0 2502 chr3R 30480475 intron PH4alphaEFB + chr3R 30481726 intron PH4alphaEFB + chr3R 30482977 intron PH4alphaEFB + chr3R_7_30480001 chr3R_30480001 RAL-757 2209 chr3R 30485058 30485067 chr3R 30485134 30485139 4 74 5.0 7.5 6.2 0.6 81 chr3R 30485058 intron PH4alphaEFB + chr3R 30485098 intron PH4alphaEFB + chr3R 30485139 intron PH4alphaEFB + chr3R_4_30485001 chr3R_30485001 RAL-757 2210 chr3R 30528310 30528315 chr3R 30528478 30528483 4 168 0.5 15.0 7.8 0.5 173 chr3R 30528310 3` UTR CR45552 - chr3R 30528396 3` UTR CR45552 - chr3R 30528483 3` UTR CR45552 - chr3R_4_30525001 chr3R_30525001 RAL-757 2211 chr3R 30548321 30548337 chr3R 30548399 30548415 5 78 4.0 8.5 6.2 0.7 94 chr3R 30548321 intron tmod + chr3R 30548368 intron tmod + chr3R 30548415 intron tmod + chr3R_5_30545001 chr3R_30545001 RAL-757 2212 chr3R 30627618 30627638 chr3R 30627683 30627707 8 62 3.0 5.0 4.0 1.6 89 chr3R 30627618 exon CG2267 - chr3R 30627662 exon CG2267 - chr3R 30627707 exon CG2267 - chr3R_8_30625001 chr3R_30625001 RAL-757 2213 chr3R 30679522 30679551 chr3R 30686986 30687020 blood 8 7463 6.0 4.5 5.2 1.3 7498 chr3R 30679522 intergenic not near genes chr3R 30683271 intergenic not near genes chr3R 30687020 intergenic not near genes chr3R_8_30680001 chr3R_30680001 RAL-757 2214 chr3R 30690175 30690192 chr3R 30690254 30690261 4 79 1.0 9.5 5.2 0.6 86 chr3R 30690175 intergenic Spn100A + chr3R 30690218 intergenic Spn100A + chr3R 30690261 intergenic Spn100A + chr3R_4_30690001 chr3R_30690001 RAL-757 2215 chr3R 30818820 30818844 chr3R 30820373 30820409 1360 12 1562 8.0 7.0 7.5 1.4 1589 chr3R 30818820 intron cindr + chr3R 30819614 intron cindr + chr3R 30820409 intron cindr + chr3R_12_30815001 chr3R_30815001 RAL-757 2216 chr3R 30850241 30850265 chr3R 30850333 30850357 6 92 4.5 2.5 3.5 1.3 116 chr3R 30850241 intergenic not near genes chr3R 30850299 intergenic not near genes chr3R 30850357 intergenic not near genes chr3R_6_30850001 chr3R_30850001 RAL-757 2217 chr3R 30948074 30948107 chr3R 30948265 30948298 9 190 2.5 2.0 2.2 2.8 224 chr3R 30948074 intergenic not near genes chr3R 30948186 intergenic not near genes chr3R 30948298 intergenic not near genes chr3R_9_30945001 chr3R_30945001 RAL-757 2218 chr3R 30973989 30974020 chr3R 30974102 30974133 9 109 5.0 3.0 4.0 1.8 144 chr3R 30973989 intron 5-HT7 - chr3R 30974061 intron 5-HT7 - chr3R 30974133 intron 5-HT7 - chr3R_9_30970001 chr3R_30970001 RAL-757 2219 chr3R 30985687 30985715 chr3R 30985772 30985800 7 84 2.5 3.0 2.8 1.8 113 chr3R 30985687 intron 5-HT7 - chr3R 30985744 intron 5-HT7 - chr3R 30985800 intron 5-HT7 - chr3R_7_30985001 chr3R_30985001 RAL-757 2220 chr3R 31010684 31010694 chr3R 31010754 31010755 4 73 2.5 4.5 3.5 0.9 71 chr3R 31010684 intron 5-HT7 - chr3R 31010720 intron 5-HT7 - chr3R 31010755 intron 5-HT7 - chr3R_4_31010001 chr3R_31010001 RAL-757 2221 chr3R 31042109 31042143 chr3R 31042196 31042203 13 84 5.5 3.5 4.5 2.4 94 chr3R 31042109 intron CanA1 + chr3R 31042156 intron CanA1 + chr3R 31042203 intron CanA1 + chr3R_13_31040001 chr3R_31040001 RAL-757 2222 chr3R 31074232 31074259 chr3R 31081830 31081857 springer 9 7597 4.5 7.5 6.0 1.3 7625 chr3R 31074232 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081857 intron Sox100B + chr3R_9_31075001 chr3R_31075001 RAL-757 2223 chr3R 31137167 31137186 chr3R 31137245 31137256 5 77 3.0 6.5 4.8 0.9 89 chr3R 31137167 intron Gycbeta100B + chr3R 31137212 intron Gycbeta100B + chr3R 31137256 intron Gycbeta100B + chr3R_5_31135001 chr3R_31135001 RAL-757 2224 chr3R 31265242 31265251 chr3R 31265323 31265332 4 80 11.5 6.5 9.0 0.4 90 chr3R 31265242 intergenic ppk24 + chr3R 31265287 intergenic ppk24 + chr3R 31265332 intergenic ppk24 + chr3R_4_31265001 chr3R_31265001 RAL-757 2225 chr3R 31265252 31265271 chr3R 31265319 31265350 12 76 8.0 5.5 6.8 1.5 98 chr3R 31265252 intergenic ppk24 + chr3R 31265301 intergenic ppk24 + chr3R 31265350 intergenic ppk24 + chr3R_12_31265001 chr3R_31265001 RAL-757 2226 chr3R 31279391 31279405 chr3R 31285563 31285573 diver 4 6179 8.5 1.5 5.0 0.7 6182 chr3R 31279391 intergenic not near genes chr3R 31282482 intergenic not near genes chr3R 31285573 intergenic not near genes chr3R_4_31280001 chr3R_31280001 RAL-757 2227 chr3R 31413095 31413118 chr3R 31418291 31418311 copia 12 5196 2.5 2.5 2.5 3.4 5216 chr3R 31413095 intron Gprk2 + chr3R 31415703 intron Gprk2 + chr3R 31418311 intron Gprk2 + chr3R_12_31415001 chr3R_31415001 RAL-757 2228 chr3R 31426888 31426912 chr3R 31426969 31427004 14 84 4.0 5.5 4.8 2.4 116 chr3R 31426888 intron Gprk2 + chr3R 31426946 intron Gprk2 + chr3R 31427004 intron Gprk2 + chr3R_14_31425001 chr3R_31425001 RAL-757 2229 chr3R 31431112 31431118 chr3R 31431195 31431204 6 84 4.0 8.5 6.2 0.8 92 chr3R 31431112 intron Gprk2 + chr3R 31431158 intron Gprk2 + chr3R 31431204 intron Gprk2 + chr3R_6_31430001 chr3R_31430001 RAL-757 2230 chr3R 31431121 31431134 chr3R 31431192 31431199 4 77 2.0 7.5 4.8 0.7 78 chr3R 31431121 intron Gprk2 + chr3R 31431160 intron Gprk2 + chr3R 31431199 intron Gprk2 + chr3R_4_31430001 chr3R_31430001 RAL-757 2231 chr3R 31539344 31539352 chr3R 31539429 31539437 5 85 4.0 4.5 4.2 1.0 93 chr3R 31539344 intergenic not near genes chr3R 31539390 intergenic not near genes chr3R 31539437 intergenic not near genes chr3R_5_31535001 chr3R_31535001 RAL-757 2232 chr3R 31539867 31539872 chr3R 31539951 31539952 4 84 6.5 7.0 6.8 0.5 85 chr3R 31539867 intergenic not near genes chr3R 31539910 intergenic not near genes chr3R 31539952 intergenic not near genes chr3R_4_31535001 chr3R_31535001 RAL-757 2233 chr3R 31691531 31691561 chr3R 31696297 31696311 Doc 9 4761 8.5 7.0 7.8 1.0 4780 chr3R 31691531 intergenic not near genes chr3R 31693921 intergenic not near genes chr3R 31696311 intergenic not near genes chr3R_9_31690001 chr3R_31690001 RAL-757 2234 chr3R 31887578 31887608 chr3R 31887659 31887669 11 75 6.0 8.5 7.2 1.3 91 chr3R 31887578 intron heph - chr3R 31887624 intron heph - chr3R 31887669 intron heph - chr3R_11_31885001 chr3R_31885001 RAL-757 2235 chr3R 31930899 31931198 chr3R 31931010 31931281 4 90 6.5 6.0 6.2 0.6 382 chr3R 31930899 intron heph - chr3R 31931090 intron heph - chr3R 31931281 intron heph - chr3R_4_31930001 chr3R_31930001 RAL-757 2236 chr3R 31931199 31931214 chr3R 31931278 31931297 8 82 4.5 4.0 4.2 1.5 98 chr3R 31931199 intron heph - chr3R 31931248 intron heph - chr3R 31931297 intron heph - chr3R_8_31930001 chr3R_31930001 RAL-757 2237 chr3R 31998000 31998025 chr3R 32005461 32005495 blood 14 7465 4.0 7.5 5.8 2.1 7495 chr3R 31998000 intron heph - chr3R 32001748 intron heph - chr3R 32005495 intron heph - chr3R_14_32000001 chr3R_32000001 RAL-757 2238 chr3R 32009983 32010005 chr3R 32010108 32010110 5 119 5.0 10.5 7.8 0.6 127 chr3R 32009983 intron heph - chr3R 32010046 intron heph - chr3R 32010110 intron heph - chr3R_5_32010001 chr3R_32010001 RAL-757 2239 chr4 76491 76520 chr4 81932 81950 I-element 5 5440 9.0 5.0 7.0 0.6 5459 chr4 76491 intron pan + chr4 79220 intron pan + chr4 81950 intron pan + chr4_5_75001 chr4_75001 RAL-757 2240 chr4 319992 320021 chr4 328163 328197 Stalker2 13 8175 7.0 5.0 6.0 1.9 8205 chr4 319992 3` UTR CG32850 + chr4 324094 intron CG32850 + chr4 328197 3` UTR,3` UTR CG32850 +,PMCA - chr4_13_320001 chr4_320001 RAL-757 2241 chr4 671625 671635 chr4 680189 680218 Tirant 5 8573 7.0 8.0 7.5 0.6 8593 chr4 671625 intron CG11360 + chr4 675922 intron CG11360 + chr4 680218 intron CG11360 + chr4_5_675001 chr4_675001 RAL-757 2242 chr4 959623 959633 chr4 959802 959812 6 178 8.5 9.0 8.8 0.6 189 chr4 959623 intergenic CR44030 +,CR45201 - chr4 959718 5` UTR CR44030 + chr4 959812 5` UTR CR44030 + chr4_6_955001 chr4_955001 RAL-757 2243 chr4 959636 959654 chr4 959800 959821 18 173 5.0 8.5 6.8 2.3 185 chr4 959636 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959821 5` UTR CR44030 + chr4_18_955001 chr4_955001 RAL-757 2244 chr4 972495 972527 chr4 972577 972602 14 79 1.0 3.5 2.2 4.4 107 chr4 972495 intron fuss - chr4 972548 intron fuss - chr4 972602 intron fuss - chr4_14_970001 chr4_970001 RAL-757 2245 chrX 295862 295882 chrX 303482 303485 412 7 7615 3.5 4.0 3.8 1.5 7623 chrX 295862 intron CG3777 + chrX 299674 intron CG3777 + chrX 303485 intron CG3777 + chrX_7_295001 chrX_295001 RAL-757 2246 chrX 318472 318501 chrX 323558 323587 flea 17 5082 2.5 4.5 3.5 3.8 5115 chrX 318472 intron,intron CG3777 +,CG32816 - chrX 321030 intron,intron CG3777 +,CG32816 - chrX 323587 intron,intron CG3777 +,CG32816 - chrX_17_320001 chrX_320001 RAL-757 2247 chrX 325640 325648 chrX 325725 325726 6 83 3.0 7.0 5.0 1.0 86 chrX 325640 intron,intron CG3777 +,CG32816 - chrX 325683 intron,intron CG3777 +,CG32816 - chrX 325726 intron,intron CG3777 +,CG32816 - chrX_6_325001 chrX_325001 RAL-757 2248 chrX 428428 428436 chrX 434605 434621 3S18 5 6182 11.5 4.5 8.0 0.6 6193 chrX 428428 intron CG32816 - chrX 431524 intron CG32816 - chrX 434621 intron CG32816 - chrX_5_430001 chrX_430001 RAL-757 2249 chrX 428443 428452 chrX 434603 434637 3S18 4 6172 6.0 4.0 5.0 0.7 6194 chrX 428443 intron CG32816 - chrX 431540 intron CG32816 - chrX 434637 intron CG32816 - chrX_4_430001 chrX_430001 RAL-757 2250 chrX 440995 441025 chrX 441073 441103 13 77 5.5 4.0 4.8 2.2 108 chrX 440995 intron CG32816 - chrX 441049 intron CG32816 - chrX 441103 intron CG32816 - chrX_13_440001 chrX_440001 RAL-757 2251 chrX 450371 450374 chrX 450449 450452 5 78 6.0 4.5 5.2 0.8 81 chrX 450371 intron CG32816 - chrX 450412 intron CG32816 - chrX 450452 intron CG32816 - chrX_5_450001 chrX_450001 RAL-757 2252 chrX 450378 450390 chrX 450448 450468 5 76 3.0 4.5 3.8 1.0 90 chrX 450378 intron CG32816 - chrX 450423 intron CG32816 - chrX 450468 intron CG32816 - chrX_5_450001 chrX_450001 RAL-757 2253 chrX 494607 494638 chrX 494688 494705 12 88 1.5 5.5 3.5 2.7 98 chrX 494607 intergenic CG17778 + chrX 494656 5` UTR CG17778 + chrX 494705 5` UTR CG17778 + chrX_12_490001 chrX_490001 RAL-757 2254 chrX 547634 547663 chrX 547878 547898 17 242 3.0 7.5 5.2 2.7 264 chrX 547634 intron Appl + chrX 547766 intron Appl + chrX 547898 intron Appl + chrX_17_545001 chrX_545001 RAL-757 2255 chrX 551424 551454 chrX 558986 559014 412 5 7561 3.5 1.5 2.5 1.4 7590 chrX 551424 intron Appl + chrX 555219 intron Appl + chrX 559014 intron Appl + chrX_5_555001 chrX_555001 RAL-757 2256 chrX 667647 667680 chrX 667731 667764 11 83 4.5 1.0 2.8 2.9 117 chrX 667647 intergenic not near genes chrX 667706 intergenic not near genes chrX 667764 intergenic not near genes chrX_11_665001 chrX_665001 RAL-757 2257 chrX 670269 670297 chrX 670349 670377 9 75 1.0 1.5 1.2 4.1 108 chrX 670269 intergenic not near genes chrX 670323 intergenic not near genes chrX 670377 intergenic not near genes chrX_9_670001 chrX_670001 RAL-757 2258 chrX 680844 680856 chrX 680925 680939 5 83 5.5 3.0 4.2 1.0 95 chrX 680844 intergenic not near genes chrX 680892 intergenic not near genes chrX 680939 intergenic not near genes chrX_5_680001 chrX_680001 RAL-757 2259 chrX 692444 692471 chrX 693350 693387 25 908 30.5 32.5 31.5 0.8 943 chrX 692444 intron sdk + chrX 692916 intron sdk + chrX 693387 intron sdk + chrX_25_690001 chrX_690001 RAL-757 2260 chrX 706817 706829 chrX 707161 707193 9 357 0.5 6.0 3.2 2.1 376 chrX 706817 intron sdk + chrX 707005 intron sdk + chrX 707193 intron sdk + chrX_9_705001 chrX_705001 RAL-757 2261 chrX 718339 718355 chrX 718418 718425 7 76 3.5 3.5 3.5 1.6 86 chrX 718339 intron sdk + chrX 718382 intron sdk + chrX 718425 intron sdk + chrX_7_715001 chrX_715001 RAL-757 2262 chrX 778131 778159 chrX 778220 778247 6 87 3.5 0.0 1.8 2.1 116 chrX 778131 intron fz3 + chrX 778189 intron fz3 + chrX 778247 intron fz3 + chrX_6_775001 chrX_775001 RAL-757 2263 chrX 799032 799066 chrX 799134 799167 12 99 4.5 3.5 4.0 2.4 135 chrX 799032 intron Rbf - chrX 799100 intron Rbf - chrX 799167 intron Rbf - chrX_12_795001 chrX_795001 RAL-757 2264 chrX 806810 806816 chrX 806878 806886 4 82 3.0 2.0 2.5 1.1 76 chrX 806810 intron Sec22 + chrX 806848 intron Sec22 + chrX 806886 intron Sec22 + chrX_4_805001 chrX_805001 RAL-757 2265 chrX 812273 812300 chrX 817900 817907 297 9 5623 2.0 2.0 2.0 3.0 5634 chrX 812273 intron CG43867 - chrX 815090 intron CG43867 - chrX 817907 intron CG43867 - chrX_9_815001 chrX_815001 RAL-757 2266 chrX 827602 827631 chrX 835394 835401 roo 10 7784 3.0 0.5 1.8 3.6 7799 chrX 827602 intron CG43867 - chrX 831502 intron CG43867 - chrX 835401 intron CG43867 - chrX_10_830001 chrX_830001 RAL-757 2267 chrX 868506 868514 chrX 868583 868589 4 76 0.5 9.5 5.0 0.7 83 chrX 868506 intron CG43867 - chrX 868548 intron CG43867 - chrX 868589 intron CG43867 - chrX_4_865001 chrX_865001 RAL-757 2268 chrX 906703 906732 chrX 908492 908515 S-element 14 1785 4.5 14.0 9.2 1.4 1812 chrX 906703 intron CG43867 - chrX 907609 intron CG43867 - chrX 908515 intron CG43867 - chrX_14_905001 chrX_905001 RAL-757 2269 chrX 1218481 1218487 chrX 1218559 1218581 5 89 4.5 5.0 4.8 0.9 100 chrX 1218481 3` UTR CG3638 - chrX 1218531 3` UTR CG3638 - chrX 1218581 3` UTR CG3638 - chrX_5_1215001 chrX_1215001 RAL-757 2270 chrX 1357772 1357813 chrX 1367942 1367978 Doc 13 10164 2.5 6.0 4.2 2.5 10206 chrX 1357772 intergenic png - chrX 1362875 intergenic not near genes chrX 1367978 intergenic not near genes chrX_13_1360001 chrX_1360001 RAL-757 2271 chrX 1430694 1430707 chrX 1431000 1431014 5 307 5.5 4.5 5.0 0.8 320 chrX 1430694 intron futsch + chrX 1430854 intron futsch + chrX 1431014 intron futsch + chrX_5_1430001 chrX_1430001 RAL-757 2272 chrX 1497327 1497354 chrX 1497400 1497412 4 60 3.0 3.0 3.0 1.0 85 chrX 1497327 intron,intron inc +,Nmdar2 - chrX 1497370 intron,intron inc +,Nmdar2 - chrX 1497412 intron,intron inc +,Nmdar2 - chrX_4_1495001 chrX_1495001 RAL-757 2273 chrX 1499990 1500022 chrX 1500078 1500100 5 81 5.5 2.0 3.8 1.0 110 chrX 1499990 intron,intron inc +,Nmdar2 - chrX 1500045 intron,intron inc +,Nmdar2 - chrX 1500100 intron,intron inc +,Nmdar2 - chrX_5_1500001 chrX_1500001 RAL-757 2274 chrX 1518036 1518045 chrX 1523437 1523439 jockey 7 5400 9.5 7.0 8.2 0.8 5403 chrX 1518036 intergenic inc + chrX 1520738 intergenic not near genes chrX 1523439 intergenic not near genes chrX_7_1520001 chrX_1520001 RAL-757 2275 chrX 1518049 1518076 chrX 1523436 1523465 jockey 12 5395 2.5 7.0 4.8 2.1 5416 chrX 1518049 intergenic inc + chrX 1520757 intergenic not near genes chrX 1523465 intergenic not near genes chrX_12_1520001 chrX_1520001 RAL-757 2276 chrX 1627974 1628000 chrX 1635440 1635448 gtwin 4 7457 6.0 2.0 4.0 0.8 7474 chrX 1627974 intron,intron Mur2B -,br + chrX 1631711 intron,intron Mur2B -,br + chrX 1635448 intron,intron Mur2B -,br + chrX_4_1630001 chrX_1630001 RAL-757 2277 chrX 1930542 1930569 chrX 1938108 1938140 opus 6 7565 2.0 4.5 3.2 1.4 7598 chrX 1930542 intergenic CG11596 + chrX 1934341 intergenic not near genes chrX 1938140 3` UTR CG3857 - chrX_6_1930001 chrX_1930001 RAL-757 2278 chrX 2023954 2023988 chrX 2024077 2024081 12 115 24.0 30.5 27.2 0.4 127 chrX 2023954 3` UTR,3` UTR east +,Actn - chrX 2024018 3` UTR,3` UTR east +,Actn - chrX 2024081 3` UTR,3` UTR east +,Actn - chrX_12_2020001 chrX_2020001 RAL-757 2279 chrX 2454486 2454494 chrX 2454552 2454571 5 74 1.0 4.0 2.5 1.4 85 chrX 2454486 intron boi - chrX 2454528 intron boi - chrX 2454571 intron boi - chrX_5_2450001 chrX_2450001 RAL-757 2280 chrX 2578821 2578845 chrX 2578925 2578925 5 99 3.0 5.0 4.0 1.0 104 chrX 2578821 intergenic Pdfr +,Vha36-3 - chrX 2578873 intergenic Vha36-3 -,Pdfr + chrX 2578925 intergenic Vha36-3 -,Pdfr + chrX_5_2575001 chrX_2575001 RAL-757 2281 chrX 2610384 2610405 chrX 2617501 2617505 HMS-Beagle 5 7110 5.5 6.5 6.0 0.7 7121 chrX 2610384 intergenic CG8636 - chrX 2613944 intergenic not near genes chrX 2617505 intergenic Tsp3A - chrX_5_2610001 chrX_2610001 RAL-757 2282 chrX 2635373 2635402 chrX 2635481 2635506 7 106 3.5 4.0 3.8 1.5 133 chrX 2635373 intron sgg + chrX 2635440 intron sgg + chrX 2635506 intron sgg + chrX_7_2635001 chrX_2635001 RAL-757 2283 chrX 2677752 2677783 chrX 2677842 2677863 5 87 2.5 4.0 3.2 1.2 111 chrX 2677752 3` UTR sgg + chrX 2677808 3` UTR sgg + chrX 2677863 intergenic sgg + chrX_5_2675001 chrX_2675001 RAL-757 2284 chrX 2834568 2834586 chrX 2834652 2834674 10 84 3.0 7.5 5.2 1.6 106 chrX 2834568 intron kirre + chrX 2834621 intron kirre + chrX 2834674 intron kirre + chrX_10_2830001 chrX_2830001 RAL-757 2285 chrX 2840338 2840351 chrX 2840412 2840427 6 80 2.5 5.0 3.8 1.2 89 chrX 2840338 intron kirre + chrX 2840382 intron kirre + chrX 2840427 intron kirre + chrX_6_2840001 chrX_2840001 RAL-757 2286 chrX 2844897 2844930 chrX 2852307 2852340 mdg1 7 7409 3.0 2.5 2.8 1.8 7443 chrX 2844897 intron kirre + chrX 2848618 intron kirre + chrX 2852340 intron kirre + chrX_7_2845001 chrX_2845001 RAL-757 2287 chrX 2888127 2888147 chrX 2888205 2888207 8 75 3.0 3.5 3.2 1.9 80 chrX 2888127 intron kirre + chrX 2888167 intron kirre + chrX 2888207 intron kirre + chrX_8_2885001 chrX_2885001 RAL-757 2288 chrX 2903494 2903523 chrX 2903738 2903753 7 240 2.0 1.5 1.8 2.5 259 chrX 2903494 intron kirre + chrX 2903624 intron kirre + chrX 2903753 intron kirre + chrX_7_2900001 chrX_2900001 RAL-757 2289 chrX 3058021 3058050 chrX 3058262 3058291 pogo 6 239 5.0 3.5 4.2 1.2 270 chrX 3058021 intron kirre + chrX 3058156 intron kirre + chrX 3058291 intron kirre + chrX_6_3055001 chrX_3055001 RAL-757 2290 chrX 3075636 3075650 chrX 3080943 3080953 Transpac 7 5305 2.0 1.0 1.5 2.8 5317 chrX 3075636 intron kirre + chrX 3078294 intron kirre + chrX 3080953 intron kirre + chrX_7_3075001 chrX_3075001 RAL-757 2291 chrX 3110696 3110728 chrX 3110966 3110998 19 266 1.5 2.0 1.8 6.8 302 chrX 3110696 intron kirre + chrX 3110847 intron kirre + chrX 3110998 intron kirre + chrX_19_3110001 chrX_3110001 RAL-757 2292 chrX 3203469 3203492 chrX 3203664 3203691 9 196 2.0 4.0 3.0 2.2 222 chrX 3203469 intron dnc + chrX 3203580 intron dnc + chrX 3203691 intron dnc + chrX_9_3200001 chrX_3200001 RAL-757 2293 chrX 3243627 3243664 chrX 3243717 3243741 10 85 3.0 2.5 2.8 2.6 114 chrX 3243627 intron dnc + chrX 3243684 intron dnc + chrX 3243741 intron dnc + chrX_10_3240001 chrX_3240001 RAL-757 2294 chrX 3306349 3306367 chrX 3306431 3306445 7 81 6.5 0.0 3.2 1.7 96 chrX 3306349 intron dnc + chrX 3306397 intron dnc + chrX 3306445 intron dnc + chrX_7_3305001 chrX_3305001 RAL-757 2295 chrX 3415015 3415050 chrX 3421200 3421235 3S18 6 6184 3.0 4.5 3.8 1.2 6220 chrX 3415015 intron,intron CR44999 +,CG12535 - chrX 3418125 intron,intron CR44999 +,CG12535 - chrX 3421235 intron,intron CR44999 +,CG12535 - chrX_6_3415001 chrX_3415001 RAL-757 2296 chrX 3493092 3493119 chrX 3502248 3502272 roo 6 9157 1.0 0.0 0.5 4.0 9180 chrX 3493092 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502272 intron,intron CR44999 +,Gas8 - chrX_6_3495001 chrX_3495001 RAL-757 2297 chrX 3516781 3516813 chrX 3516874 3516882 7 82 3.0 3.5 3.2 1.7 101 chrX 3516781 intron,intron CR44999 +,CG32791 - chrX 3516832 intron,intron CR44999 +,CG32791 - chrX 3516882 intron,intron CR44999 +,CG32791 - chrX_7_3515001 chrX_3515001 RAL-757 2298 chrX 3535409 3535429 chrX 3535500 3535520 8 91 2.5 7.5 5.0 1.3 111 chrX 3535409 intron CG32791 - chrX 3535464 intron CG32791 - chrX 3535520 intron CG32791 - chrX_8_3535001 chrX_3535001 RAL-757 2299 chrX 3595027 3595045 chrX 3595103 3595116 4 75 1.5 10.5 6.0 0.6 89 chrX 3595027 intron AstA-R1 + chrX 3595072 intron AstA-R1 + chrX 3595116 intron AstA-R1 + chrX_4_3595001 chrX_3595001 RAL-757 2300 chrX 3595046 3595052 chrX 3595094 3595111 7 57 2.5 9.0 5.8 1.0 65 chrX 3595046 intron AstA-R1 + chrX 3595078 intron AstA-R1 + chrX 3595111 intron AstA-R1 + chrX_7_3595001 chrX_3595001 RAL-757 2301 chrX 3597117 3597126 chrX 3597205 3597212 4 86 1.0 6.0 3.5 0.9 95 chrX 3597117 intron AstA-R1 + chrX 3597164 intron AstA-R1 + chrX 3597212 intron AstA-R1 + chrX_4_3595001 chrX_3595001 RAL-757 2302 chrX 3597549 3597581 chrX 3619717 3619744 roo 14 22162 5.5 2.0 3.8 2.9 22195 chrX 3597549 intron AstA-R1 + chrX 3608646 intron AstA-R1 + chrX 3619744 intron AstA-R1 + chrX_14_3605001 chrX_3605001 RAL-757 2303 chrX 3662482 3662498 chrX 3662564 3662568 5 80 11.0 4.5 7.8 0.6 86 chrX 3662482 intron AstA-R1 + chrX 3662525 intron AstA-R1 + chrX 3662568 intron AstA-R1 + chrX_5_3660001 chrX_3660001 RAL-757 2304 chrX 3713100 3713135 chrX 3713208 3713244 7 109 3.5 1.5 2.5 2.0 144 chrX 3713100 intron Rala - chrX 3713172 intron Rala - chrX 3713244 intron Rala - chrX_7_3710001 chrX_3710001 RAL-757 2305 chrX 3752399 3752408 chrX 3764743 3764757 17.6 4 12346 20.0 6.0 13.0 0.3 12358 chrX 3752399 intron tlk + chrX 3758578 intron tlk + chrX 3764757 intron tlk + chrX_4_3755001 chrX_3755001 RAL-757 2306 chrX 3881270 3881293 chrX 3881409 3881428 9 136 8.5 2.0 5.2 1.5 158 chrX 3881270 intron VhaAC39-1 + chrX 3881349 intron VhaAC39-1 + chrX 3881428 intron VhaAC39-1 + chrX_9_3880001 chrX_3880001 RAL-757 2307 chrX 3916143 3916155 chrX 3916218 3916243 7 84 2.0 6.5 4.2 1.3 100 chrX 3916143 intron CG42541 - chrX 3916193 intron CG42541 - chrX 3916243 intron CG42541 - chrX_7_3915001 chrX_3915001 RAL-757 2308 chrX 3986862 3986894 chrX 3994495 3994527 412 13 7628 2.5 3.5 3.0 3.2 7665 chrX 3986862 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994527 intergenic not near genes chrX_13_3990001 chrX_3990001 RAL-757 2309 chrX 4028010 4028030 chrX 4028481 4028489 4 467 2.5 5.0 3.8 0.8 479 chrX 4028010 intergenic not near genes chrX 4028250 intergenic not near genes chrX 4028489 intergenic not near genes chrX_4_4025001 chrX_4025001 RAL-757 2310 chrX 4048501 4048527 chrX 4048575 4048603 13 75 2.0 3.5 2.8 3.4 102 chrX 4048501 3` UTR CR45482 - chrX 4048552 3` UTR CR45482 - chrX 4048603 3` UTR CR45482 - chrX_13_4045001 chrX_4045001 RAL-757 2311 chrX 4065858 4065883 chrX 4065943 4065960 12 83 3.5 0.5 2.0 4.0 102 chrX 4065858 intergenic not near genes chrX 4065909 intergenic not near genes chrX 4065960 intergenic not near genes chrX_12_4065001 chrX_4065001 RAL-757 2312 chrX 4157890 4157923 chrX 4164925 4164932 297 11 7029 5.0 5.5 5.2 1.8 7042 chrX 4157890 intron Fas2 - chrX 4161411 intron Fas2 - chrX 4164932 intron Fas2 - chrX_11_4160001 chrX_4160001 RAL-757 2313 chrX 4343887 4343897 chrX 4344001 4344011 5 114 1.5 4.0 2.8 1.3 124 chrX 4343887 intron norpA + chrX 4343949 intron norpA + chrX 4344011 intron norpA + chrX_5_4340001 chrX_4340001 RAL-757 2314 chrX 4398822 4398851 chrX 4398906 4398940 6 88 2.5 3.0 2.8 1.6 118 chrX 4398822 intron CR32773 - chrX 4398881 intron CR32773 - chrX 4398940 intron CR32773 - chrX_6_4395001 chrX_4395001 RAL-757 2315 chrX 4525756 4525769 chrX 4525848 4525861 7 92 3.5 5.5 4.5 1.3 105 chrX 4525756 intron CR32773 - chrX 4525808 intron CR32773 - chrX 4525861 intron CR32773 - chrX_7_4525001 chrX_4525001 RAL-757 2316 chrX 4700392 4700428 chrX 4700734 4700771 jockey 6 339 2.5 3.0 2.8 1.6 379 chrX 4700392 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700771 3` UTR ctp + chrX_6_4700001 chrX_4700001 RAL-757 2317 chrX 4731816 4731847 chrX 4736907 4736921 jockey 10 5086 3.0 3.0 3.0 2.5 5105 chrX 4731816 intergenic not near genes chrX 4734368 intergenic not near genes chrX 4736921 intergenic not near genes chrX_10_4730001 chrX_4730001 RAL-757 2318 chrX 4763255 4763285 chrX 4763738 4763761 Stalker4 12 483 1.5 5.5 3.5 2.7 506 chrX 4763255 intergenic not near genes chrX 4763508 intergenic not near genes chrX 4763761 intergenic not near genes chrX_12_4760001 chrX_4760001 RAL-757 2319 chrX 4792385 4792404 chrX 4792818 4792837 jockey 8 433 3.0 4.5 3.8 1.7 452 chrX 4792385 intergenic not near genes chrX 4792611 intergenic not near genes chrX 4792837 intergenic not near genes chrX_8_4790001 chrX_4790001 RAL-757 2320 chrX 4827982 4827994 chrX 4835347 4835365 Stalker4 5 7366 5.0 6.0 5.5 0.8 7383 chrX 4827982 intergenic not near genes chrX 4831674 intergenic not near genes chrX 4835365 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-757 2321 chrX 4827996 4827999 chrX 4835337 4835370 Stalker4 4 7355 4.5 4.5 4.5 0.7 7374 chrX 4827996 intergenic not near genes chrX 4831683 intergenic not near genes chrX 4835370 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-757 2322 chrX 4990043 4990075 chrX 4997257 4997280 roo 17 7210 2.0 5.5 3.8 3.5 7237 chrX 4990043 intron CR44833 - chrX 4993662 intron CR44833 - chrX 4997280 intron CR44833 - chrX_17_4990001 chrX_4990001 RAL-757 2323 chrX 5020885 5020912 chrX 5020978 5020984 13 90 4.0 4.0 4.0 2.6 99 chrX 5020885 intron CR44833 - chrX 5020934 intron CR44833 - chrX 5020984 intron CR44833 - chrX_13_5020001 chrX_5020001 RAL-757 2324 chrX 5096277 5096304 chrX 5103841 5103869 springer 9 7565 2.0 4.5 3.2 2.1 7592 chrX 5096277 intron,intron CG15465 +,rg + chrX 5100073 intron,intron CG15465 +,rg + chrX 5103869 intron,intron CG15465 +,rg + chrX_9_5100001 chrX_5100001 RAL-757 2325 chrX 5272819 5272852 chrX 5272906 5272932 7 76 1.5 3.5 2.5 2.0 113 chrX 5272819 intergenic not near genes chrX 5272876 intergenic not near genes chrX 5272932 intergenic not near genes chrX_7_5270001 chrX_5270001 RAL-757 2326 chrX 5524848 5524866 chrX 5528711 5528727 412 7 3863 2.5 3.5 3.0 1.8 3879 chrX 5524848 intergenic snoRNA:Psi28S-3342 - chrX 5526788 intergenic not near genes chrX 5528727 intergenic Vsx2 - chrX_7_5525001 chrX_5525001 RAL-757 2327 chrX 5798864 5798892 chrX 5799026 5799054 10 156 1.5 2.0 1.8 3.6 190 chrX 5798864 intergenic not near genes chrX 5798959 intergenic not near genes chrX 5799054 intergenic not near genes chrX_10_5795001 chrX_5795001 RAL-757 2328 chrX 5883825 5883839 chrX 5884053 5884080 pogo 5 234 2.5 6.0 4.2 1.0 255 chrX 5883825 intron CR45668 - chrX 5883952 intron CR45668 - chrX 5884080 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-757 2329 chrX 5884161 5884186 chrX 5884402 5884427 pogo 13 239 4.0 2.0 3.0 3.2 266 chrX 5884161 intron CR45668 - chrX 5884294 intron CR45668 - chrX 5884427 intron CR45668 - chrX_13_5880001 chrX_5880001 RAL-757 2330 chrX 5922107 5922122 chrX 5922211 5922233 7 108 4.0 6.5 5.2 1.1 126 chrX 5922107 intron CG3726 + chrX 5922170 intron CG3726 + chrX 5922233 intron CG3726 + chrX_7_5920001 chrX_5920001 RAL-757 2331 chrX 6171585 6171617 chrX 6179018 6179045 Quasimodo 10 7429 3.0 4.5 3.8 2.1 7460 chrX 6171585 intron Ca-alpha1T - chrX 6175315 intron Ca-alpha1T - chrX 6179045 intron Ca-alpha1T - chrX_10_6175001 chrX_6175001 RAL-757 2332 chrX 6216326 6216341 chrX 6216424 6216439 6 97 1.5 6.5 4.0 1.2 113 chrX 6216326 intergenic not near genes chrX 6216382 intergenic not near genes chrX 6216439 intergenic not near genes chrX_6_6215001 chrX_6215001 RAL-757 2333 chrX 6312189 6312224 chrX 6312272 6312307 8 82 5.0 2.5 3.8 1.7 118 chrX 6312189 intron CG15894 + chrX 6312248 intron CG15894 + chrX 6312307 intron CG15894 + chrX_8_6310001 chrX_6310001 RAL-757 2334 chrX 6335222 6335243 chrX 6337732 6337751 Tirant 7 2506 0.5 6.0 3.2 1.7 2529 chrX 6335222 intergenic not near genes chrX 6336486 intergenic not near genes chrX 6337751 intergenic CG3842 + chrX_7_6335001 chrX_6335001 RAL-757 2335 chrX 6370545 6370568 chrX 6370643 6370665 5 96 7.5 1.0 4.2 1.0 120 chrX 6370545 3` UTR Marf + chrX 6370605 3` UTR,3` UTR Marf +,CR44816 - chrX 6370665 3` UTR,3` UTR Marf +,CR44816 - chrX_5_6370001 chrX_6370001 RAL-757 2336 chrX 6392878 6392903 chrX 6397632 6397660 Doc 14 4758 4.0 4.5 4.2 2.7 4782 chrX 6392878 intergenic not near genes chrX 6395269 intergenic not near genes chrX 6397660 intergenic not near genes chrX_14_6395001 chrX_6395001 RAL-757 2337 chrX 6404845 6404865 chrX 6404972 6404988 4 125 2.0 4.0 3.0 1.0 143 chrX 6404845 intergenic not near genes chrX 6404916 intergenic not near genes chrX 6404988 intergenic not near genes chrX_4_6400001 chrX_6400001 RAL-757 2338 chrX 6413538 6413567 chrX 6413972 6413976 10 428 3.5 1.5 2.5 2.9 438 chrX 6413538 intergenic not near genes chrX 6413757 intergenic not near genes chrX 6413976 intergenic not near genes chrX_10_6410001 chrX_6410001 RAL-757 2339 chrX 6445327 6445331 chrX 6451064 6451089 297 5 5750 3.0 3.0 3.0 1.2 5762 chrX 6445327 intron CG42340 - chrX 6448208 intron CG42340 - chrX 6451089 intron CG42340 - chrX_5_6445001 chrX_6445001 RAL-757 2340 chrX 6562820 6562849 chrX 6571298 6571331 Tirant 7 8476 4.5 1.0 2.8 1.8 8511 chrX 6562820 intron CG34417 + chrX 6567076 intron CG34417 + chrX 6571331 intron CG34417 + chrX_7_6565001 chrX_6565001 RAL-757 2341 chrX 6605478 6605509 chrX 6608500 6608531 Burdock 15 3019 3.5 8.0 5.8 2.2 3053 chrX 6605478 intron pigs + chrX 6607004 intron pigs + chrX 6608531 intron pigs + chrX_15_6605001 chrX_6605001 RAL-757 2342 chrX 6737520 6737545 chrX 6737600 6737623 8 78 4.5 3.5 4.0 1.6 103 chrX 6737520 intron CG3168 - chrX 6737572 intron CG3168 - chrX 6737623 intron CG3168 - chrX_8_6735001 chrX_6735001 RAL-757 2343 chrX 6897592 6897709 chrX 6897665 6897818 9 97 0.5 0.5 0.5 6.0 226 chrX 6897592 intergenic not near genes chrX 6897705 intergenic not near genes chrX 6897818 intergenic not near genes chrX_9_6895001 chrX_6895001 RAL-757 2344 chrX 6988190 6988205 chrX 6988261 6988281 5 72 3.5 3.0 3.2 1.2 91 chrX 6988190 intron ogre - chrX 6988236 intron ogre - chrX 6988281 intron ogre - chrX_5_6985001 chrX_6985001 RAL-757 2345 chrX 6989501 6989512 chrX 6989588 6989599 4 87 13.0 2.5 7.8 0.5 98 chrX 6989501 intron ogre - chrX 6989550 intron ogre - chrX 6989599 intron ogre - chrX_4_6985001 chrX_6985001 RAL-757 2346 chrX 7023603 7023628 chrX 7030993 7031016 Tabor 6 7388 7.5 5.5 6.5 0.8 7413 chrX 7023603 intron CG12541 - chrX 7027310 intron CG12541 - chrX 7031016 intron CG12541 - chrX_6_7025001 chrX_7025001 RAL-757 2347 chrX 7048632 7048661 chrX 7048709 7048716 6 69 7.5 2.0 4.8 1.0 84 chrX 7048632 intron CG12541 - chrX 7048674 intron CG12541 - chrX 7048716 intron CG12541 - chrX_6_7045001 chrX_7045001 RAL-757 2348 chrX 7125247 7125275 chrX 7134403 7134434 roo 7 9159 3.5 4.0 3.8 1.5 9187 chrX 7125247 intergenic not near genes chrX 7129840 intergenic not near genes chrX 7134434 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-757 2349 chrX 7570633 7570658 chrX 7570767 7570773 4 129 5.5 2.5 4.0 0.8 140 chrX 7570633 intergenic not near genes chrX 7570703 intergenic not near genes chrX 7570773 intergenic not near genes chrX_4_7570001 chrX_7570001 RAL-757 2350 chrX 7702912 7702934 chrX 7703338 7703352 jockey 17 432 9.5 9.0 9.2 1.7 440 chrX 7702912 intron CHES-1-like - chrX 7703132 intron CHES-1-like - chrX 7703352 intron CHES-1-like - chrX_17_7700001 chrX_7700001 RAL-757 2351 chrX 7784235 7784243 chrX 7784537 7784545 jockey 4 300 4.5 5.5 5.0 0.7 310 chrX 7784235 intergenic not near genes chrX 7784390 intergenic not near genes chrX 7784545 intergenic not near genes chrX_4_7780001 chrX_7780001 RAL-757 2352 chrX 7832433 7832462 chrX 7832522 7832551 11 85 4.0 1.5 2.8 2.9 118 chrX 7832433 intron CG1402 + chrX 7832492 intron CG1402 + chrX 7832551 intron CG1402 + chrX_11_7830001 chrX_7830001 RAL-757 2353 chrX 7881851 7881877 chrX 7881933 7881959 10 82 1.5 3.0 2.2 3.1 108 chrX 7881851 intergenic Ir7f -,Ir7e - chrX 7881905 intergenic Ir7f -,Ir7e - chrX 7881959 3` UTR Ir7f - chrX_10_7880001 chrX_7880001 RAL-757 2354 chrX 7960891 7960904 chrX 7960974 7960993 7 84 7.0 5.0 6.0 1.0 102 chrX 7960891 intron,5` UTR sws -,CR45620 + chrX 7960942 intron sws - chrX 7960993 intron sws - chrX_7_7960001 chrX_7960001 RAL-757 2355 chrX 8066576 8066601 chrX 8066658 8066690 6 83 1.5 0.0 0.8 3.3 114 chrX 8066576 intron mys + chrX 8066633 intron mys + chrX 8066690 intron mys + chrX_6_8065001 chrX_8065001 RAL-757 2356 chrX 8085576 8085601 chrX 8085661 8085687 11 86 3.5 4.0 3.8 2.3 111 chrX 8085576 intron,5` UTR CG2256 -,CR45535 + chrX 8085632 intron,5` UTR CG2256 -,CR45535 + chrX 8085687 intron,5` UTR CG2256 -,CR45535 + chrX_11_8085001 chrX_8085001 RAL-757 2357 chrX 8092295 8092320 chrX 8092370 8092405 15 81 6.0 3.5 4.8 2.6 110 chrX 8092295 intron Ubc-E2H - chrX 8092350 intron Ubc-E2H - chrX 8092405 intron Ubc-E2H - chrX_15_8090001 chrX_8090001 RAL-757 2358 chrX 8260017 8260035 chrX 8260108 8260111 4 87 5.5 3.5 4.5 0.7 94 chrX 8260017 intron CG1632 + chrX 8260064 intron CG1632 + chrX 8260111 intron CG1632 + chrX_4_8260001 chrX_8260001 RAL-757 2359 chrX 8263779 8263793 chrX 8263863 8263877 5 84 1.0 3.5 2.2 1.6 98 chrX 8263779 intron CG1632 + chrX 8263828 intron CG1632 + chrX 8263877 intron CG1632 + chrX_5_8260001 chrX_8260001 RAL-757 2360 chrX 8364855 8364879 chrX 8365242 8365276 BS 8 394 4.5 5.0 4.8 1.4 421 chrX 8364855 intron nAChRalpha3 - chrX 8365066 intron nAChRalpha3 - chrX 8365276 intron nAChRalpha3 - chrX_8_8365001 chrX_8365001 RAL-757 2361 chrX 8421465 8421493 chrX 8421555 8421585 9 91 1.5 3.0 2.2 2.8 120 chrX 8421465 intron Trf2 + chrX 8421525 intron Trf2 + chrX 8421585 intron Trf2 + chrX_9_8420001 chrX_8420001 RAL-757 2362 chrX 8500928 8500958 chrX 8501092 8501122 13 161 3.5 0.0 1.8 4.6 194 chrX 8500928 intron CG33181 + chrX 8501025 intron CG33181 + chrX 8501122 intron CG33181 + chrX_13_8500001 chrX_8500001 RAL-757 2363 chrX 8506026 8506057 chrX 8506104 8506135 8 76 5.0 2.5 3.8 1.7 109 chrX 8506026 intron CG33181 + chrX 8506080 intron CG33181 + chrX 8506135 intron CG33181 + chrX_8_8505001 chrX_8505001 RAL-757 2364 chrX 8506529 8506558 chrX 8506737 8506743 13 205 4.0 2.0 3.0 3.2 214 chrX 8506529 intron CG33181 + chrX 8506636 intron CG33181 + chrX 8506743 intron CG33181 + chrX_13_8505001 chrX_8505001 RAL-757 2365 chrX 8922326 8922346 chrX 8922760 8922780 jockey 7 433 7.5 5.0 6.2 1.0 454 chrX 8922326 intron rdgA + chrX 8922553 intron rdgA + chrX 8922780 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-757 2366 chrX 8922348 8922362 chrX 8922758 8922761 jockey 8 419 5.5 4.5 5.0 1.3 413 chrX 8922348 intron rdgA + chrX 8922554 intron rdgA + chrX 8922761 intron rdgA + chrX_8_8920001 chrX_8920001 RAL-757 2367 chrX 8948757 8948786 chrX 8956267 8956272 roo 13 7506 4.5 5.0 4.8 2.2 7515 chrX 8948757 intron rdgA + chrX 8952514 intron rdgA + chrX 8956272 intron rdgA + chrX_13_8950001 chrX_8950001 RAL-757 2368 chrX 9218083 9218089 chrX 9218169 9218170 4 87 8.5 1.0 4.8 0.7 87 chrX 9218083 3` UTR t - chrX 9218126 3` UTR t - chrX 9218170 3` UTR t - chrX_4_9215001 chrX_9215001 RAL-757 2369 chrX 9508134 9508168 chrX 9509652 9509675 jockey 15 1514 4.0 5.5 4.8 2.6 1541 chrX 9508134 intron CG32700 - chrX 9508904 intron CG32700 - chrX 9509675 intron CG32700 - chrX_15_9505001 chrX_9505001 RAL-757 2370 chrX 9575798 9575817 chrX 9576117 9576127 mdg3 13 319 3.5 7.0 5.2 2.1 329 chrX 9575798 intron,exon CG32699 -,CG42395 - chrX 9575962 intron,intron CG32699 -,CG42395 - chrX 9576127 intron,exon CG32699 -,CG42395 - chrX_13_9575001 chrX_9575001 RAL-757 2371 chrX 9599176 9599182 chrX 9599254 9599254 4 76 4.5 5.0 4.8 0.7 78 chrX 9599176 intergenic not near genes chrX 9599215 intergenic not near genes chrX 9599254 intergenic not near genes chrX_4_9595001 chrX_9595001 RAL-757 2372 chrX 9599185 9599201 chrX 9599250 9599254 7 71 2.0 4.5 3.2 1.7 69 chrX 9599185 intergenic not near genes chrX 9599220 intergenic not near genes chrX 9599254 intergenic not near genes chrX_7_9595001 chrX_9595001 RAL-757 2373 chrX 10138222 10138245 chrX 10145726 10145748 412 8 7501 4.5 6.0 5.2 1.3 7526 chrX 10138222 intron,intron RhoU +,CR44894 - chrX 10141985 intron,intron RhoU +,CR44894 - chrX 10145748 intron,intron RhoU +,CR44894 - chrX_8_10140001 chrX_10140001 RAL-757 2374 chrX 10154285 10154295 chrX 10154361 10154367 6 75 4.5 2.0 3.2 1.4 82 chrX 10154285 intron,intron CR44894 -,CG12645 + chrX 10154326 intron,intron CR44894 -,CG12645 + chrX 10154367 intron,intron CR44894 -,CG12645 + chrX_6_10150001 chrX_10150001 RAL-757 2375 chrX 10154303 10154312 chrX 10154360 10154388 6 73 2.5 2.0 2.2 1.9 85 chrX 10154303 intron,intron CR44894 -,CG12645 + chrX 10154346 intron,intron CR44894 -,CG12645 + chrX 10154388 intron,exon CR44894 -,CG12645 + chrX_6_10150001 chrX_10150001 RAL-757 2376 chrX 10267314 10267329 chrX 10276464 10276479 roo 4 9150 3.0 4.5 3.8 0.8 9165 chrX 10267314 3` UTR alpha-Man-I - chrX 10271896 intron alpha-Man-I - chrX 10276479 3` UTR alpha-Man-I - chrX_4_10270001 chrX_10270001 RAL-757 2377 chrX 10317570 10317577 chrX 10317636 10317655 4 72 3.0 0.5 1.8 1.4 85 chrX 10317570 intron alpha-Man-I - chrX 10317612 intron alpha-Man-I - chrX 10317655 intron alpha-Man-I - chrX_4_10315001 chrX_10315001 RAL-757 2378 chrX 10348810 10348831 chrX 10356375 10356396 springer 10 7561 5.5 5.5 5.5 1.5 7586 chrX 10348810 intergenic snoRNA:U3:9B + chrX 10352603 intergenic not near genes chrX 10356396 intergenic l(1)G0289 - chrX_10_10350001 chrX_10350001 RAL-757 2379 chrX 10369116 10369121 chrX 10369277 10369288 5 165 7.5 5.0 6.2 0.7 172 chrX 10369116 intron CG17841 + chrX 10369202 intron CG17841 + chrX 10369288 intron CG17841 + chrX_5_10365001 chrX_10365001 RAL-757 2380 chrX 10550342 10550360 chrX 10550420 10550438 4 78 6.5 1.5 4.0 0.8 96 chrX 10550342 intron spri - chrX 10550390 intron spri - chrX 10550438 intron spri - chrX_4_10550001 chrX_10550001 RAL-757 2381 chrX 10550850 10550884 chrX 10552317 10552327 hobo 10 1464 3.5 3.0 3.2 2.4 1477 chrX 10550850 intron spri - chrX 10551588 intron spri - chrX 10552327 intron spri - chrX_10_10550001 chrX_10550001 RAL-757 2382 chrX 10686048 10686084 chrX 10691185 10691221 roo 10 5136 2.5 5.0 3.8 2.1 5173 chrX 10686048 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691221 intron X11Lbeta + chrX_10_10685001 chrX_10685001 RAL-757 2383 chrX 10694159 10694181 chrX 10694237 10694250 7 77 2.5 5.5 4.0 1.4 91 chrX 10694159 intron X11Lbeta + chrX 10694204 intron X11Lbeta + chrX 10694250 intron X11Lbeta + chrX_7_10690001 chrX_10690001 RAL-757 2384 chrX 10719125 10719148 chrX 10719209 10719214 11 81 0.0 2.0 1.0 5.5 89 chrX 10719125 intron CG32676 - chrX 10719170 intron CG32676 - chrX 10719214 intron CG32676 - chrX_11_10715001 chrX_10715001 RAL-757 2385 chrX 10933921 10933940 chrX 10934007 10934028 6 88 0.5 2.5 1.5 2.4 107 chrX 10933921 intron Myo10A + chrX 10933974 intron Myo10A + chrX 10934028 intron Myo10A + chrX_6_10930001 chrX_10930001 RAL-757 2386 chrX 11095998 11096031 chrX 11103098 11103133 HMS-Beagle 6 7098 2.0 4.0 3.0 1.5 7135 chrX 11095998 intergenic not near genes chrX 11099566 intergenic not near genes chrX 11103133 intron CG42249 + chrX_6_11095001 chrX_11095001 RAL-757 2387 chrX 11184247 11184281 chrX 11189326 11189357 flea 4 5077 2.0 4.5 3.2 1.0 5110 chrX 11184247 intergenic not near genes chrX 11186802 intergenic not near genes chrX 11189357 intergenic not near genes chrX_4_11185001 chrX_11185001 RAL-757 2388 chrX 11379772 11379791 chrX 11379917 11379936 10 142 6.0 5.0 5.5 1.5 164 chrX 11379772 intron dlg1 + chrX 11379854 intron dlg1 + chrX 11379936 intron dlg1 + chrX_10_11375001 chrX_11375001 RAL-757 2389 chrX 11425012 11425033 chrX 11425087 11425120 17 83 3.5 5.0 4.2 3.3 108 chrX 11425012 intron Gs2 + chrX 11425066 intron Gs2 + chrX 11425120 intron Gs2 + chrX_17_11425001 chrX_11425001 RAL-757 2390 chrX 11442879 11442912 chrX 11443075 11443108 9 196 5.5 3.5 4.5 1.6 229 chrX 11442879 intron,intron Evi5 -,Sk1 + chrX 11442994 intron,intron Evi5 -,Sk1 + chrX 11443108 intron,intron Evi5 -,Sk1 + chrX_9_11440001 chrX_11440001 RAL-757 2391 chrX 11554860 11554868 chrX 11555276 11555305 10 422 16.0 38.5 27.2 0.4 445 chrX 11554860 3` UTR Drak + chrX 11555082 3` UTR CG1572 - chrX 11555305 3` UTR CG1572 - chrX_10_11555001 chrX_11555001 RAL-757 2392 chrX 11558287 11558302 chrX 11558359 11558376 7 77 6.0 3.0 4.5 1.3 89 chrX 11558287 intron CG1572 - chrX 11558332 intron CG1572 - chrX 11558376 intron CG1572 - chrX_7_11555001 chrX_11555001 RAL-757 2393 chrX 11572545 11572568 chrX 11572694 11572720 7 154 19.0 41.0 30.0 0.2 175 chrX 11572545 intergenic Kmn1 -,CG11697 + chrX 11572632 intergenic CG11697 +,Kmn1 - chrX 11572720 5` UTR CG11697 + chrX_7_11570001 chrX_11570001 RAL-757 2394 chrX 11633415 11633447 chrX 11640469 11640501 297 12 7052 7.5 1.0 4.2 2.3 7086 chrX 11633415 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640501 intron Ptp10D + chrX_12_11635001 chrX_11635001 RAL-757 2395 chrX 11657902 11657932 chrX 11657993 11658007 11 87 0.5 5.0 2.8 2.9 105 chrX 11657902 intron Ptp10D + chrX 11657954 intron Ptp10D + chrX 11658007 intron Ptp10D + chrX_11_11655001 chrX_11655001 RAL-757 2396 chrX 11715543 11715555 chrX 11715762 11715776 6 220 5.0 2.5 3.8 1.2 233 chrX 11715543 intergenic not near genes chrX 11715660 intergenic CR45618 - chrX 11715776 intergenic CR45618 - chrX_6_11715001 chrX_11715001 RAL-757 2397 chrX 11715558 11715573 chrX 11715760 11715798 5 220 3.0 2.5 2.8 1.3 240 chrX 11715558 intergenic not near genes chrX 11715678 intergenic CR45618 - chrX 11715798 intergenic CR45618 - chrX_5_11715001 chrX_11715001 RAL-757 2398 chrX 11804683 11804687 chrX 11804781 11804791 4 102 7.0 4.0 5.5 0.6 108 chrX 11804683 intron Hsc70-3 - chrX 11804737 intron Hsc70-3 - chrX 11804791 intron Hsc70-3 - chrX_4_11800001 chrX_11800001 RAL-757 2399 chrX 11922369 11922383 chrX 11922502 11922516 7 133 1.0 7.5 4.2 1.3 147 chrX 11922369 exon Sclp - chrX 11922442 intron Sclp - chrX 11922516 intron Sclp - chrX_7_11920001 chrX_11920001 RAL-757 2400 chrX 12041179 12041199 chrX 12041615 12041633 5 436 3.5 2.0 2.8 1.3 454 chrX 12041179 intergenic not near genes chrX 12041406 intergenic not near genes chrX 12041633 intergenic not near genes chrX_5_12040001 chrX_12040001 RAL-757 2401 chrX 12168138 12168153 chrX 12173580 12173580 I-element 6 5438 2.0 5.0 3.5 1.3 5442 chrX 12168138 intron Ten-a + chrX 12170859 intron Ten-a + chrX 12173580 intron Ten-a + chrX_6_12170001 chrX_12170001 RAL-757 2402 chrX 12272846 12272869 chrX 12272925 12272945 8 78 3.5 3.0 3.2 1.9 99 chrX 12272846 intron Ten-a + chrX 12272896 intron Ten-a + chrX 12272945 intron Ten-a + chrX_8_12270001 chrX_12270001 RAL-757 2403 chrX 12350793 12350805 chrX 12350854 12350885 5 72 2.5 1.0 1.8 1.8 92 chrX 12350793 intergenic not near genes chrX 12350839 intergenic not near genes chrX 12350885 intergenic not near genes chrX_5_12350001 chrX_12350001 RAL-757 2404 chrX 12442084 12442104 chrX 12442166 12442181 6 80 5.0 2.0 3.5 1.3 97 chrX 12442084 intron Pkcdelta + chrX 12442132 intron Pkcdelta + chrX 12442181 intron Pkcdelta + chrX_6_12440001 chrX_12440001 RAL-757 2405 chrX 12785424 12785461 chrX 12785501 12785538 8 72 3.0 4.5 3.8 1.7 114 chrX 12785424 intergenic Pde9 -,CG32647 - chrX 12785481 intergenic Pde9 - chrX 12785538 intergenic Pde9 - chrX_8_12785001 chrX_12785001 RAL-757 2406 chrX 12953906 12953927 chrX 12954038 12954064 8 136 0.0 3.0 1.5 3.2 158 chrX 12953906 intron hec - chrX 12953985 intron hec - chrX 12954064 intron hec - chrX_8_12950001 chrX_12950001 RAL-757 2407 chrX 13146596 13146628 chrX 13146684 13146711 24 86 6.0 3.0 4.5 4.4 115 chrX 13146596 intron CG32645 + chrX 13146654 intron CG32645 + chrX 13146711 intron CG32645 + chrX_24_13145001 chrX_13145001 RAL-757 2408 chrX 13161693 13161716 chrX 13161770 13161791 8 77 6.0 4.0 5.0 1.3 98 chrX 13161693 3` UTR CG12096 + chrX 13161742 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161791 3` UTR,3` UTR CG12096 +,CG34411 - chrX_8_13160001 chrX_13160001 RAL-757 2409 chrX 13278150 13278184 chrX 13278233 13278267 7 82 4.5 0.0 2.2 2.2 117 chrX 13278150 intron HDAC4 - chrX 13278208 intron HDAC4 - chrX 13278267 intron HDAC4 - chrX_7_13275001 chrX_13275001 RAL-757 2410 chrX 13401495 13401519 chrX 13401844 13401871 jockey 8 350 4.5 5.0 4.8 1.4 376 chrX 13401495 intergenic CG1673 +,CG12725 - chrX 13401683 intergenic CG12725 -,CG1673 + chrX 13401871 3` UTR CG12725 - chrX_8_13400001 chrX_13400001 RAL-757 2411 chrX 13403021 13403037 chrX 13403148 13403164 X-element 8 126 12.0 4.5 8.2 0.9 143 chrX 13403021 intergenic CG12725 - chrX 13403092 intergenic CG12725 - chrX 13403164 intergenic CG12725 - chrX_8_13400001 chrX_13400001 RAL-757 2412 chrX 13429470 13429495 chrX 13430609 13430620 jockey 7 1139 1.5 6.0 3.8 1.5 1150 chrX 13429470 intergenic not near genes chrX 13430045 intergenic not near genes chrX 13430620 intergenic not near genes chrX_7_13430001 chrX_13430001 RAL-757 2413 chrX 13463644 13463670 chrX 13469221 13469233 mdg3 14 5572 6.0 8.5 7.2 1.7 5589 chrX 13463644 intron Neto + chrX 13466438 intron Neto + chrX 13469233 intron Neto + chrX_14_13465001 chrX_13465001 RAL-757 2414 chrX 13563420 13563450 chrX 13563500 13563530 12 76 1.0 1.0 1.0 6.0 110 chrX 13563420 intergenic CG32633 +,Tango13 + chrX 13563475 intergenic CG32633 +,Tango13 + chrX 13563530 intergenic CG32633 +,Tango13 + chrX_12_13560001 chrX_13560001 RAL-757 2415 chrX 13628439 13628473 chrX 13628523 13628551 10 80 2.0 3.0 2.5 2.9 112 chrX 13628439 intron NFAT + chrX 13628495 intron NFAT + chrX 13628551 intron NFAT + chrX_10_13625001 chrX_13625001 RAL-757 2416 chrX 13843367 13843399 chrX 13843442 13843476 5 76 4.5 1.0 2.8 1.3 109 chrX 13843367 intron AMPdeam - chrX 13843422 intron AMPdeam - chrX 13843476 intron AMPdeam - chrX_5_13840001 chrX_13840001 RAL-757 2417 chrX 13915430 13915449 chrX 13915562 13915581 5 132 4.5 0.5 2.5 1.4 151 chrX 13915430 intron mamo - chrX 13915506 intron mamo - chrX 13915581 intron mamo - chrX_5_13915001 chrX_13915001 RAL-757 2418 chrX 13937979 13938006 chrX 13941250 13941277 I-element 6 3270 3.5 2.0 2.8 1.6 3298 chrX 13937979 intron mamo - chrX 13939628 intron mamo - chrX 13941277 intron mamo - chrX_6_13935001 chrX_13935001 RAL-757 2419 chrX 14021767 14021770 chrX 14022227 14022234 4 462 7.0 4.5 5.8 0.6 467 chrX 14021767 intergenic not near genes chrX 14022000 intergenic not near genes chrX 14022234 intergenic not near genes chrX_4_14020001 chrX_14020001 RAL-757 2420 chrX 14105030 14105049 chrX 14114180 14114200 roo 4 9144 4.5 6.0 5.2 0.6 9170 chrX 14105030 intergenic not near genes chrX 14109615 intergenic not near genes chrX 14114200 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-757 2421 chrX 14157592 14157616 chrX 14163249 14163267 297 8 5655 4.0 2.0 3.0 2.0 5675 chrX 14157592 intergenic not near genes chrX 14160430 intergenic not near genes chrX 14163267 intergenic not near genes chrX_8_14160001 chrX_14160001 RAL-757 2422 chrX 14188072 14188108 chrX 14188155 14188191 20 82 3.0 2.0 2.5 5.7 119 chrX 14188072 intergenic CG12481 + chrX 14188132 intergenic CG12481 + chrX 14188191 intergenic CG12481 + chrX_20_14185001 chrX_14185001 RAL-757 2423 chrX 14190766 14190780 chrX 14191014 14191018 4 250 1.5 3.5 2.5 1.1 252 chrX 14190766 intergenic CG11585 +,CG13403 - chrX 14190892 intergenic CG11585 +,CG13403 - chrX 14191018 intergenic CG13403 -,CG11585 + chrX_4_14190001 chrX_14190001 RAL-757 2424 chrX 14209463 14209490 chrX 14209554 14209581 6 86 4.0 6.0 5.0 1.0 118 chrX 14209463 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209522 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209581 intron,intron l(1)G0007 +,l(1)G0469 - chrX_6_14205001 chrX_14205001 RAL-757 2425 chrX 14339577 14339591 chrX 14339667 14339673 6 88 3.5 1.5 2.5 1.7 96 chrX 14339577 intron dpr8 + chrX 14339625 intron dpr8 + chrX 14339673 intron dpr8 + chrX_6_14335001 chrX_14335001 RAL-757 2426 chrX 14416306 14416320 chrX 14421074 14421083 F-element 7 4767 2.5 1.5 2.0 2.3 4777 chrX 14416306 intron dpr8 + chrX 14418694 intron dpr8 + chrX 14421083 intron dpr8 + chrX_7_14415001 chrX_14415001 RAL-757 2427 chrX 14484981 14484984 chrX 14485070 14485072 4 89 0.0 5.5 2.8 1.1 91 chrX 14484981 intergenic not near genes chrX 14485026 intergenic not near genes chrX 14485072 intergenic not near genes chrX_4_14485001 chrX_14485001 RAL-757 2428 chrX 14500513 14500537 chrX 14500604 14500620 7 91 2.5 3.5 3.0 1.8 107 chrX 14500513 intergenic not near genes chrX 14500566 intergenic not near genes chrX 14500620 intergenic not near genes chrX_7_14500001 chrX_14500001 RAL-757 2429 chrX 14531358 14531386 chrX 14531446 14531475 9 87 5.0 6.5 5.8 1.3 117 chrX 14531358 intergenic not near genes chrX 14531416 intergenic not near genes chrX 14531475 intergenic not near genes chrX_9_14530001 chrX_14530001 RAL-757 2430 chrX 14636465 14636477 chrX 14641906 14641918 I-element 4 5440 4.0 3.5 3.8 0.8 5453 chrX 14636465 intron NetA - chrX 14639192 intron NetA - chrX 14641918 intron NetA - chrX_4_14635001 chrX_14635001 RAL-757 2431 chrX 14636479 14636487 chrX 14641905 14641928 I-element 4 5431 3.0 3.5 3.2 1.0 5449 chrX 14636479 intron NetA - chrX 14639204 intron NetA - chrX 14641928 intron NetA - chrX_4_14635001 chrX_14635001 RAL-757 2432 chrX 14636488 14636497 chrX 14641904 14641910 I-element 5 5419 1.5 3.5 2.5 1.4 5422 chrX 14636488 intron NetA - chrX 14639199 intron NetA - chrX 14641910 intron NetA - chrX_5_14635001 chrX_14635001 RAL-757 2433 chrX 14714047 14714065 chrX 14714129 14714130 4 76 3.0 6.0 4.5 0.7 83 chrX 14714047 intron NetB - chrX 14714088 intron NetB - chrX 14714130 intron NetB - chrX_4_14710001 chrX_14710001 RAL-757 2434 chrX 14778027 14778060 chrX 14782824 14782857 Doc 15 4793 5.0 6.5 5.8 2.2 4830 chrX 14778027 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782857 intergenic Ag5r2 - chrX_15_14780001 chrX_14780001 RAL-757 2435 chrX 14806762 14806788 chrX 14806850 14806876 9 87 0.5 2.0 1.2 4.1 114 chrX 14806762 intron rut - chrX 14806819 intron rut - chrX 14806876 intron rut - chrX_9_14805001 chrX_14805001 RAL-757 2436 chrX 14818774 14818798 chrX 14823968 14824001 copia 7 5199 2.5 2.0 2.2 2.2 5227 chrX 14818774 intron rut - chrX 14821388 intron rut - chrX 14824001 intron rut - chrX_7_14820001 chrX_14820001 RAL-757 2437 chrX 14936857 14936889 chrX 14946114 14946146 roo 13 9253 7.0 6.5 6.8 1.7 9289 chrX 14936857 intron pdgy - chrX 14941502 intron pdgy - chrX 14946146 intron pdgy - chrX_13_14940001 chrX_14940001 RAL-757 2438 chrX 14952435 14952466 chrX 14952603 14952626 16 161 6.5 2.5 4.5 2.9 191 chrX 14952435 intron,3` UTR pdgy -,CR44831 - chrX 14952530 intron,3` UTR pdgy -,CR44831 - chrX 14952626 intron,3` UTR pdgy -,CR44831 - chrX_16_14950001 chrX_14950001 RAL-757 2439 chrX 15116900 15116937 chrX 15117017 15117050 14 114 3.5 3.5 3.5 3.1 150 chrX 15116900 intergenic Cyp4s3 - chrX 15116975 intergenic Cyp4s3 - chrX 15117050 intergenic not near genes chrX_14_15115001 chrX_15115001 RAL-757 2440 chrX 15243163 15243192 chrX 15243389 15243416 7 223 2.0 3.5 2.8 1.8 253 chrX 15243163 intergenic not near genes chrX 15243290 intergenic not near genes chrX 15243416 intergenic PPYR1 - chrX_7_15240001 chrX_15240001 RAL-757 2441 chrX 15277636 15277669 chrX 15277720 15277748 9 83 3.0 4.0 3.5 2.0 112 chrX 15277636 intergenic not near genes chrX 15277692 intergenic not near genes chrX 15277748 intergenic not near genes chrX_9_15275001 chrX_15275001 RAL-757 2442 chrX 15358311 15358341 chrX 15358394 15358426 18 86 3.0 2.0 2.5 5.1 115 chrX 15358311 intron acj6 - chrX 15358368 intron acj6 - chrX 15358426 intron acj6 - chrX_18_15355001 chrX_15355001 RAL-757 2443 chrX 15369847 15369859 chrX 15369925 15369942 9 81 4.0 10.0 7.0 1.1 95 chrX 15369847 intron acj6 - chrX 15369894 intron acj6 - chrX 15369942 intron acj6 - chrX_9_15365001 chrX_15365001 RAL-757 2444 chrX 15413052 15413084 chrX 15417354 15417376 Juan 11 4296 4.0 6.0 5.0 1.8 4324 chrX 15413052 intron Cngl - chrX 15415214 intron Cngl - chrX 15417376 intron Cngl - chrX_11_15415001 chrX_15415001 RAL-757 2445 chrX 15435697 15435702 chrX 15436115 15436135 rover 4 429 1.0 7.0 4.0 0.8 438 chrX 15435697 intron Cngl - chrX 15435916 intron Cngl - chrX 15436135 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-757 2446 chrX 15497595 15497613 chrX 15497685 15497703 4 88 3.5 2.0 2.8 1.1 108 chrX 15497595 intron,3` UTR Gmap +,CR44888 - chrX 15497649 intron,3` UTR Gmap +,CR44888 - chrX 15497703 intron,3` UTR Gmap +,CR44888 - chrX_4_15495001 chrX_15495001 RAL-757 2447 chrX 15497614 15497617 chrX 15497684 15497691 4 78 3.5 1.5 2.5 1.1 77 chrX 15497614 intron,3` UTR Gmap +,CR44888 - chrX 15497652 intron,3` UTR Gmap +,CR44888 - chrX 15497691 intron,3` UTR Gmap +,CR44888 - chrX_4_15495001 chrX_15495001 RAL-757 2448 chrX 15558059 15558073 chrX 15559187 15559196 5 1128 5.0 5.0 5.0 0.8 1137 chrX 15558059 intergenic not near genes chrX 15558628 intergenic not near genes chrX 15559196 intergenic not near genes chrX_5_15555001 chrX_15555001 RAL-757 2449 chrX 15671204 15671210 chrX 15671289 15671297 4 86 4.0 0.0 2.0 1.3 93 chrX 15671204 intergenic CG15646 - chrX 15671250 intergenic CG15646 - chrX 15671297 intergenic CG15646 - chrX_4_15670001 chrX_15670001 RAL-757 2450 chrX 15681396 15681404 chrX 15681478 15681486 4 82 5.5 3.0 4.2 0.8 90 chrX 15681396 intergenic not near genes chrX 15681441 intergenic not near genes chrX 15681486 intergenic not near genes chrX_4_15680001 chrX_15680001 RAL-757 2451 chrX 15681405 15681424 chrX 15681476 15681506 6 78 3.0 3.0 3.0 1.5 101 chrX 15681405 intergenic not near genes chrX 15681456 intergenic not near genes chrX 15681506 intergenic not near genes chrX_6_15680001 chrX_15680001 RAL-757 2452 chrX 15726428 15726438 chrX 15726487 15726518 6 72 3.5 2.5 3.0 1.5 90 chrX 15726428 exon CG8184 + chrX 15726473 intron CG8184 + chrX 15726518 intron CG8184 + chrX_6_15725001 chrX_15725001 RAL-757 2453 chrX 15749656 15749683 chrX 15749758 15749786 9 103 1.5 3.0 2.2 2.8 130 chrX 15749656 intron CG8239 + chrX 15749721 intron CG8239 + chrX 15749786 intron CG8239 + chrX_9_15745001 chrX_15745001 RAL-757 2454 chrX 15902701 15902712 chrX 15902794 15902805 4 91 9.0 7.5 8.2 0.4 104 chrX 15902701 intron shi + chrX 15902753 intron shi + chrX 15902805 intron shi + chrX_4_15900001 chrX_15900001 RAL-757 2455 chrX 16222796 16222810 chrX 16231130 16231148 roo 7 8344 2.0 5.0 3.5 1.6 8352 chrX 16222796 intergenic not near genes chrX 16226972 intergenic not near genes chrX 16231148 intergenic not near genes chrX_7_16225001 chrX_16225001 RAL-757 2456 chrX 16340693 16340696 chrX 16349834 16349853 roo 5 9150 1.0 7.5 4.2 1.0 9160 chrX 16340693 intergenic Dsp1 + chrX 16345273 intergenic not near genes chrX 16349853 intergenic sl + chrX_5_16345001 chrX_16345001 RAL-757 2457 chrX 16492655 16492662 chrX 16498232 16498239 mdg3 4 5577 7.5 6.0 6.8 0.5 5584 chrX 16492655 intron para - chrX 16495447 intron para - chrX 16498239 intron para - chrX_4_16495001 chrX_16495001 RAL-757 2458 chrX 16492663 16492679 chrX 16498222 16498256 mdg3 11 5573 5.0 4.0 4.5 2.0 5593 chrX 16492663 intron para - chrX 16495460 intron para - chrX 16498256 intron para - chrX_11_16495001 chrX_16495001 RAL-757 2459 chrX 16529429 16529441 chrX 16529540 16529546 7 110 0.0 7.5 3.8 1.5 117 chrX 16529429 intron para - chrX 16529488 intron para - chrX 16529546 intron para - chrX_7_16525001 chrX_16525001 RAL-757 2460 chrX 16951339 16951355 chrX 16951403 16951431 5 73 2.0 3.0 2.5 1.4 92 chrX 16951339 exon RhoGAP15B + chrX 16951385 exon RhoGAP15B + chrX 16951431 exon RhoGAP15B + chrX_5_16950001 chrX_16950001 RAL-757 2461 chrX 17057936 17057965 chrX 17058177 17058196 pogo 8 239 4.0 5.0 4.5 1.5 260 chrX 17057936 intron CG45002 - chrX 17058066 intron CG45002 - chrX 17058196 intron CG45002 - chrX_8_17055001 chrX_17055001 RAL-757 2462 chrX 17110308 17110335 chrX 17110429 17110457 13 121 0.0 5.5 2.8 3.4 149 chrX 17110308 intron CG5004 + chrX 17110382 intron CG5004 + chrX 17110457 intron CG5004 + chrX_13_17110001 chrX_17110001 RAL-757 2463 chrX 17195216 17195237 chrX 17200295 17200322 flea 7 5079 4.0 4.5 4.2 1.3 5106 chrX 17195216 3` UTR baz + chrX 17197769 3` UTR baz + chrX 17200322 3` UTR baz + chrX_7_17195001 chrX_17195001 RAL-757 2464 chrX 17205848 17205858 chrX 17205938 17205946 5 90 3.0 6.5 4.8 0.9 98 chrX 17205848 intergenic not near genes chrX 17205897 intergenic not near genes chrX 17205946 intergenic CG32564 + chrX_5_17205001 chrX_17205001 RAL-757 2465 chrX 17258613 17258634 chrX 17258766 17258787 8 153 4.5 8.0 6.2 1.1 174 chrX 17258613 intron f + chrX 17258700 intron f + chrX 17258787 intron f + chrX_8_17255001 chrX_17255001 RAL-757 2466 chrX 17290063 17290093 chrX 17290139 17290169 17 75 2.0 3.0 2.5 4.9 106 chrX 17290063 intron,intron CG5445 +,Fim - chrX 17290116 intron,intron CG5445 +,Fim - chrX 17290169 intron,intron CG5445 +,Fim - chrX_17_17290001 chrX_17290001 RAL-757 2467 chrX 17316370 17316396 chrX 17316454 17316479 10 82 5.0 0.5 2.8 2.6 109 chrX 17316370 intron B-H2 + chrX 17316424 intron B-H2 + chrX 17316479 intron B-H2 + chrX_10_17315001 chrX_17315001 RAL-757 2468 chrX 17352594 17352624 chrX 17352693 17352727 19 99 0.5 5.0 2.8 5.0 133 chrX 17352594 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352727 intergenic not near genes chrX_19_17350001 chrX_17350001 RAL-757 2469 chrX 17429357 17429364 chrX 17429456 17429464 4 100 2.0 4.5 3.2 1.0 107 chrX 17429357 intron CG12994 - chrX 17429410 intron CG12994 - chrX 17429464 intron CG12994 - chrX_4_17425001 chrX_17425001 RAL-757 2470 chrX 17434428 17434445 chrX 17434521 17434538 8 91 4.0 2.0 3.0 2.0 110 chrX 17434428 intron CG12994 - chrX 17434483 intron CG12994 - chrX 17434538 intron CG12994 - chrX_8_17430001 chrX_17430001 RAL-757 2471 chrX 17502350 17502372 chrX 17502430 17502449 10 79 7.0 3.5 5.2 1.6 99 chrX 17502350 intron CG43658 - chrX 17502400 intron CG43658 - chrX 17502449 intron CG43658 - chrX_10_17500001 chrX_17500001 RAL-757 2472 chrX 17657098 17657117 chrX 17657170 17657196 11 74 5.5 2.0 3.8 2.3 98 chrX 17657098 intergenic beta-Spec +,IntS2 - chrX 17657147 intergenic beta-Spec +,IntS2 - chrX 17657196 intergenic beta-Spec +,IntS2 - chrX_11_17655001 chrX_17655001 RAL-757 2473 chrX 17680909 17680924 chrX 17680965 17680995 5 71 2.0 6.5 4.2 1.0 86 chrX 17680909 intron chas - chrX 17680952 intron chas - chrX 17680995 intron chas - chrX_5_17680001 chrX_17680001 RAL-757 2474 chrX 17708844 17708859 chrX 17708923 17708938 8 78 0.0 8.0 4.0 1.6 94 chrX 17708844 intron CG8173 - chrX 17708891 intron CG8173 - chrX 17708938 intron CG8173 - chrX_8_17705001 chrX_17705001 RAL-757 2475 chrX 18009897 18009915 chrX 18009975 18009990 12 77 3.5 5.0 4.2 2.3 93 chrX 18009897 intron Sh - chrX 18009944 intron Sh - chrX 18009990 intron Sh - chrX_12_18005001 chrX_18005001 RAL-757 2476 chrX 18040430 18040450 chrX 18040518 18040530 7 87 2.5 8.5 5.5 1.1 100 chrX 18040430 intron Sh - chrX 18040480 intron Sh - chrX 18040530 intron Sh - chrX_7_18040001 chrX_18040001 RAL-757 2477 chrX 18126599 18126825 chrX 18126722 18126902 13 114 4.5 4.0 4.2 2.5 303 chrX 18126599 intron CG32553 - chrX 18126750 intron CG32553 - chrX 18126902 intron CG32553 - chrX_13_18125001 chrX_18125001 RAL-757 2478 chrX 18337426 18337456 chrX 18337521 18337546 8 93 2.5 1.5 2.0 2.7 120 chrX 18337426 intron CG6123 - chrX 18337486 intron CG6123 - chrX 18337546 intron CG6123 - chrX_8_18335001 chrX_18335001 RAL-757 2479 chrX 18427380 18427408 chrX 18427791 18427813 13 409 2.0 3.5 2.8 3.4 433 chrX 18427380 intergenic CG42323 + chrX 18427596 intergenic not near genes chrX 18427813 intergenic not near genes chrX_13_18425001 chrX_18425001 RAL-757 2480 chrX 18429499 18429525 chrX 18434807 18434836 Transpac 5 5309 5.0 5.0 5.0 0.8 5337 chrX 18429499 intergenic not near genes chrX 18432168 intergenic not near genes chrX 18434836 intergenic not near genes chrX_5_18430001 chrX_18430001 RAL-757 2481 chrX 18476723 18476750 chrX 18476809 18476816 5 79 4.0 4.5 4.2 1.0 93 chrX 18476723 intron CG32547 - chrX 18476770 intron CG32547 - chrX 18476816 intron CG32547 - chrX_5_18475001 chrX_18475001 RAL-757 2482 chrX 18486127 18486139 chrX 18486206 18486215 11 85 3.0 7.5 5.2 1.8 88 chrX 18486127 exon psh - chrX 18486171 intron psh - chrX 18486215 intron psh - chrX_11_18485001 chrX_18485001 RAL-757 2483 chrX 18524361 18524373 chrX 18524435 18524440 7 76 5.5 3.5 4.5 1.3 79 chrX 18524361 intron Bx + chrX 18524400 intron Bx + chrX 18524440 intron Bx + chrX_7_18520001 chrX_18520001 RAL-757 2484 chrX 18645014 18645049 chrX 18645111 18645147 9 98 3.5 4.5 4.0 1.8 133 chrX 18645014 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645147 intron Rip11 - chrX_9_18645001 chrX_18645001 RAL-757 2485 chrX 18698855 18698877 chrX 18698972 18698974 6 114 5.0 8.0 6.5 0.8 119 chrX 18698855 intergenic not near genes chrX 18698914 intergenic not near genes chrX 18698974 intergenic not near genes chrX_6_18695001 chrX_18695001 RAL-757 2486 chrX 18774452 18774472 chrX 18774537 18774547 7 81 2.0 0.5 1.2 3.2 95 chrX 18774452 intergenic CCKLR-17D3 - chrX 18774500 intergenic CCKLR-17D3 - chrX 18774547 intergenic not near genes chrX_7_18770001 chrX_18770001 RAL-757 2487 chrX 18912454 18912478 chrX 18912550 18912570 10 94 1.0 4.5 2.8 2.6 116 chrX 18912454 5` UTR CR44708 + chrX 18912512 intron CR44708 + chrX 18912570 intron CR44708 + chrX_10_18910001 chrX_18910001 RAL-757 2488 chrX 18947501 18947535 chrX 18947594 18947628 8 91 4.5 6.0 5.2 1.3 127 chrX 18947501 intron CG43759 + chrX 18947564 intron CG43759 + chrX 18947628 intron CG43759 + chrX_8_18945001 chrX_18945001 RAL-757 2489 chrX 18957068 18957100 chrX 18965730 18965743 roo 10 8661 1.5 2.5 2.0 3.3 8675 chrX 18957068 intron CG43759 + chrX 18961406 intron CG43759 + chrX 18965743 intron CG43759 + chrX_10_18960001 chrX_18960001 RAL-757 2490 chrX 19020598 19020621 chrX 19020676 19020699 16 76 0.0 5.5 2.8 4.2 101 chrX 19020598 intron CG43759 + chrX 19020648 intron CG43759 + chrX 19020699 intron CG43759 + chrX_16_19020001 chrX_19020001 RAL-757 2491 chrX 19060408 19060427 chrX 19065191 19065211 Doc 9 4784 5.5 3.5 4.5 1.6 4803 chrX 19060408 intron CG14190 + chrX 19062810 intron CG14190 + chrX 19065211 intron CG14190 + chrX_9_19060001 chrX_19060001 RAL-757 2492 chrX 19076386 19076410 chrX 19076526 19076540 10 140 2.0 3.5 2.8 2.6 154 chrX 19076386 intergenic not near genes chrX 19076463 intergenic not near genes chrX 19076540 intergenic not near genes chrX_10_19075001 chrX_19075001 RAL-757 2493 chrX 19080328 19080341 chrX 19080434 19080447 5 104 9.5 3.0 6.2 0.7 119 chrX 19080328 intergenic not near genes chrX 19080388 intergenic not near genes chrX 19080447 intergenic not near genes chrX_5_19080001 chrX_19080001 RAL-757 2494 chrX 19080342 19080358 chrX 19080431 19080438 8 99 4.0 2.5 3.2 1.9 96 chrX 19080342 intergenic not near genes chrX 19080390 intergenic not near genes chrX 19080438 intergenic not near genes chrX_8_19080001 chrX_19080001 RAL-757 2495 chrX 19084114 19084123 chrX 19084215 19084242 7 115 0.5 0.5 0.5 4.7 128 chrX 19084114 intergenic CR45503 + chrX 19084178 intergenic CR45503 + chrX 19084242 intergenic CR45503 + chrX_7_19080001 chrX_19080001 RAL-757 2496 chrX 19106830 19106850 chrX 19106900 19106905 9 69 4.5 0.5 2.5 2.6 75 chrX 19106830 intergenic not near genes chrX 19106868 intergenic not near genes chrX 19106905 intergenic not near genes chrX_9_19105001 chrX_19105001 RAL-757 2497 chrX 19119701 19119715 chrX 19119786 19119796 5 85 3.0 0.5 1.8 1.8 95 chrX 19119701 intergenic not near genes chrX 19119748 intergenic not near genes chrX 19119796 intergenic not near genes chrX_5_19115001 chrX_19115001 RAL-757 2498 chrX 19136559 19136584 chrX 19143472 19143498 412 7 6915 2.5 5.0 3.8 1.5 6939 chrX 19136559 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143498 3` UTR RhoGAP18B - chrX_7_19140001 chrX_19140001 RAL-757 2499 chrX 13057298 13057300 chrX 19242812 19242814 21 6185514 21.0 17.5 19.2 1.0 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_21_16150001 chrX_16150001 RAL-757 2500 chrX 19281000 19281030 chrX 19281129 19281157 12 128 0.5 3.5 2.0 4.0 157 chrX 19281000 intergenic CG8034 - chrX 19281078 intergenic CG8034 - chrX 19281157 intergenic CG8034 - chrX_12_19280001 chrX_19280001 RAL-757 2501 chrX 19356993 19357020 chrX 19358432 19358447 NOF 10 1439 6.0 1.0 3.5 2.2 1454 chrX 19356993 intron kek5 + chrX 19357720 intron kek5 + chrX 19358447 intron kek5 + chrX_10_19355001 chrX_19355001 RAL-757 2502 chrX 19380159 19380187 chrX 19380400 19380427 pogo 7 237 8.5 6.5 7.5 0.8 268 chrX 19380159 intron kek5 + chrX 19380293 intron kek5 + chrX 19380427 intron kek5 + chrX_7_19380001 chrX_19380001 RAL-757 2503 chrX 19404630 19404647 chrX 19404726 19404745 4 97 3.0 1.5 2.2 1.2 115 chrX 19404630 intron kek5 + chrX 19404688 intron kek5 + chrX 19404745 intron kek5 + chrX_4_19400001 chrX_19400001 RAL-757 2504 chrX 19460143 19460179 chrX 19460224 19460261 11 78 2.0 6.5 4.2 2.1 118 chrX 19460143 intron kek5 + chrX 19460202 intron kek5 + chrX 19460261 intron kek5 + chrX_11_19460001 chrX_19460001 RAL-757 2505 chrX 19462462 19462487 chrX 19462700 19462725 12 235 1.0 2.0 1.5 4.8 263 chrX 19462462 intron kek5 + chrX 19462594 intron kek5 + chrX 19462725 intron kek5 + chrX_12_19460001 chrX_19460001 RAL-757 2506 chrX 19472150 19472161 chrX 19472690 19472708 jockey 4 550 4.0 3.0 3.5 0.9 558 chrX 19472150 intergenic kek5 + chrX 19472429 intergenic not near genes chrX 19472708 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-757 2507 chrX 19593947 19593977 chrX 19594032 19594055 9 83 1.5 6.0 3.8 1.9 108 chrX 19593947 exon CG14205 + chrX 19594001 intron CG14205 + chrX 19594055 intron CG14205 + chrX_9_19590001 chrX_19590001 RAL-757 2508 chrX 19689416 19689438 chrX 19689488 19689516 9 74 4.5 4.5 4.5 1.6 100 chrX 19689416 intergenic Mer -,CG14227 - chrX 19689466 intergenic Mer - chrX 19689516 intergenic Mer - chrX_9_19685001 chrX_19685001 RAL-757 2509 chrX 19710092 19710101 chrX 19711859 19711876 S-element 4 1774 3.5 5.0 4.2 0.8 1784 chrX 19710092 intron meso18E - chrX 19710984 intron meso18E - chrX 19711876 intron meso18E - chrX_4_19710001 chrX_19710001 RAL-757 2510 chrX 19791261 19791286 chrX 19791354 19791380 13 93 7.0 0.5 3.8 2.7 119 chrX 19791261 intergenic not near genes chrX 19791320 intergenic not near genes chrX 19791380 intergenic not near genes chrX_13_19790001 chrX_19790001 RAL-757 2511 chrX 19822834 19822850 chrX 19823001 19823016 6 167 3.0 4.5 3.8 1.2 182 chrX 19822834 intergenic not near genes chrX 19822925 intergenic skpE - chrX 19823016 intergenic skpE - chrX_6_19820001 chrX_19820001 RAL-757 2512 chrX 19881453 19881485 chrX 19881534 19881566 6 76 2.0 3.0 2.5 1.7 113 chrX 19881453 intron Hers + chrX 19881510 intron Hers + chrX 19881566 intron Hers + chrX_6_19880001 chrX_19880001 RAL-757 2513 chrX 19983862 19983899 chrX 19983942 19983979 9 76 2.0 2.0 2.0 3.0 117 chrX 19983862 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983979 intergenic not near genes chrX_9_19980001 chrX_19980001 RAL-757 2514 chrX 20041534 20041564 chrX 20041614 20041642 16 77 2.0 5.5 3.8 3.3 108 chrX 20041534 intron Dop2R - chrX 20041588 intron Dop2R - chrX 20041642 intron Dop2R - chrX_16_20040001 chrX_20040001 RAL-757 2515 chrX 20069267 20069291 chrX 20069399 20069424 12 131 2.5 2.0 2.2 3.8 157 chrX 20069267 intergenic not near genes chrX 20069346 intergenic not near genes chrX 20069424 intergenic not near genes chrX_12_20065001 chrX_20065001 RAL-757 2516 chrX 20105208 20105225 chrX 20105313 20105328 5 104 31.5 20.5 26.0 0.2 120 chrX 20105208 intergenic not near genes chrX 20105268 intergenic not near genes chrX 20105328 intergenic not near genes chrX_5_20105001 chrX_20105001 RAL-757 2517 chrX 20279751 20279776 chrX 20279832 20279857 9 81 3.5 3.0 3.2 2.1 106 chrX 20279751 intergenic not near genes chrX 20279804 intergenic not near genes chrX 20279857 intergenic not near genes chrX_9_20275001 chrX_20275001 RAL-757 2518 chrX 20312885 20312909 chrX 20312963 20312987 4 78 6.0 3.5 4.8 0.7 102 chrX 20312885 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20312987 intron CG1504 - chrX_4_20310001 chrX_20310001 RAL-757 2519 chrX 20377332 20377347 chrX 20378799 20378814 hobo 7 1465 3.0 4.5 3.8 1.5 1482 chrX 20377332 intergenic not near genes chrX 20378073 intergenic not near genes chrX 20378814 intergenic not near genes chrX_7_20375001 chrX_20375001 RAL-757 2520 chrX 20384966 20384989 chrX 20385451 20385457 5 480 0.0 5.0 2.5 1.4 491 chrX 20384966 intergenic not near genes chrX 20385212 intergenic not near genes chrX 20385457 intergenic not near genes chrX_5_20385001 chrX_20385001 RAL-757 2521 chrX 20435472 20435481 chrX 20435545 20435569 5 81 3.5 7.0 5.2 0.8 97 chrX 20435472 intron CG1695 + chrX 20435520 intron CG1695 + chrX 20435569 intron CG1695 + chrX_5_20435001 chrX_20435001 RAL-757 2522 chrX 20443173 20443184 chrX 20443249 20443260 7 76 8.0 1.5 4.8 1.2 87 chrX 20443173 exon CG1695 + chrX 20443216 intron CG1695 + chrX 20443260 intron CG1695 + chrX_7_20440001 chrX_20440001 RAL-757 2523 chrX 20484388 20484406 chrX 20484493 20484511 4 104 2.5 5.0 3.8 0.8 123 chrX 20484388 intron RhoGAP19D - chrX 20484450 intron RhoGAP19D - chrX 20484511 intron RhoGAP19D - chrX_4_20480001 chrX_20480001 RAL-757 2524 chrX 20493912 20493930 chrX 20494070 20494091 8 156 0.0 3.0 1.5 3.2 179 chrX 20493912 intron RhoGAP19D - chrX 20494002 intron RhoGAP19D - chrX 20494091 intron RhoGAP19D - chrX_8_20490001 chrX_20490001 RAL-757 2525 chrX 20560258 20560283 chrX 20560354 20560369 5 92 2.0 4.5 3.2 1.2 111 chrX 20560258 intron RunxB + chrX 20560314 intron RunxB + chrX 20560369 intron RunxB + chrX_5_20560001 chrX_20560001 RAL-757 2526 chrX 20662319 20662332 chrX 20662401 20662414 8 80 6.5 0.0 3.2 1.9 95 chrX 20662319 intron CG1835 + chrX 20662366 intron CG1835 + chrX 20662414 intron CG1835 + chrX_8_20660001 chrX_20660001 RAL-757 2527 chrX 20710412 20710441 chrX 20710489 20710518 11 76 0.0 3.5 1.8 3.9 106 chrX 20710412 intergenic not near genes chrX 20710465 intergenic not near genes chrX 20710518 intergenic not near genes chrX_11_20710001 chrX_20710001 RAL-757 2528 chrX 20915042 20915075 chrX 20915213 20915216 8 165 3.5 1.5 2.5 2.3 174 chrX 20915042 intron shakB - chrX 20915129 intron shakB - chrX 20915216 intron shakB - chrX_8_20915001 chrX_20915001 RAL-757 2529 chrX 20940720 20940755 chrX 20942189 20942222 hobo 14 1468 5.0 3.5 4.2 2.7 1502 chrX 20940720 intergenic not near genes chrX 20941471 intergenic not near genes chrX 20942222 intergenic not near genes chrX_14_20940001 chrX_20940001 RAL-757 2530 chrX 20981025 20981060 chrX 20981128 20981163 13 99 2.5 3.5 3.0 3.2 138 chrX 20981025 intergenic not near genes chrX 20981094 intergenic not near genes chrX 20981163 intergenic not near genes chrX_13_20980001 chrX_20980001 RAL-757 2531 chrX 21009857 21009882 chrX 21009936 21009967 8 82 0.0 3.0 1.5 3.2 110 chrX 21009857 intergenic not near genes chrX 21009912 intergenic not near genes chrX 21009967 intergenic not near genes chrX_8_21005001 chrX_21005001 RAL-757 2532 chrX 21086131 21086144 chrX 21087158 21087172 jockey 10 1028 11.0 2.5 6.8 1.3 1041 chrX 21086131 intergenic not near genes chrX 21086652 intergenic not near genes chrX 21087172 intergenic not near genes chrX_10_21085001 chrX_21085001 RAL-757 2533 chrX 21086146 21086164 chrX 21087157 21087193 jockey 10 1020 7.0 2.5 4.8 1.7 1047 chrX 21086146 intergenic not near genes chrX 21086670 intergenic not near genes chrX 21087193 intergenic not near genes chrX_10_21085001 chrX_21085001 RAL-757 2534 chrX 21088043 21088059 chrX 21088175 21088190 4 130 7.5 2.0 4.8 0.7 147 chrX 21088043 intergenic not near genes chrX 21088116 intergenic not near genes chrX 21088190 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-757 2535 chrX 21089157 21089175 chrX 21089238 21089269 7 88 5.5 4.5 5.0 1.2 112 chrX 21089157 intergenic not near genes chrX 21089213 intergenic not near genes chrX 21089269 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-757 2536 chrX 21275157 21275195 chrX 21275235 21275273 19 76 1.0 1.5 1.2 8.6 116 chrX 21275157 intron CG32521 - chrX 21275215 intron CG32521 - chrX 21275273 intron CG32521 - chrX_19_21275001 chrX_21275001 RAL-757 2537 chrX 21308894 21308905 chrX 21308977 21308984 4 82 7.0 0.0 3.5 0.9 90 chrX 21308894 intron CG1801 - chrX 21308939 intron CG1801 - chrX 21308984 intron CG1801 - chrX_4_21305001 chrX_21305001 RAL-757 2538 chrX 21328118 21328146 chrX 21328229 21328247 11 108 5.5 0.5 3.0 2.8 129 chrX 21328118 3` UTR CG1486 + chrX 21328182 intergenic CG1486 +,tty - chrX 21328247 intergenic CG1486 +,tty - chrX_11_21325001 chrX_21325001 RAL-757 2539 chrX 21419710 21419737 chrX 21419796 21419826 8 81 2.5 4.0 3.2 1.9 116 chrX 21419710 intergenic not near genes chrX 21419768 intergenic not near genes chrX 21419826 intergenic not near genes chrX_8_21415001 chrX_21415001 RAL-757 2540 chrX 21453329 21453345 chrX 21453449 21453465 4 116 5.5 3.5 4.5 0.7 136 chrX 21453329 intron CG42343 - chrX 21453397 intron CG42343 - chrX 21453465 intron CG42343 - chrX_4_21450001 chrX_21450001 RAL-757 2541 chrX 21458693 21458732 chrX 21464129 21464163 Ivk 12 5435 2.0 0.5 1.2 5.5 5470 chrX 21458693 intergenic not near genes chrX 21461428 intergenic not near genes chrX 21464163 intergenic not near genes chrX_12_21460001 chrX_21460001 RAL-757 2542 chrX 21464949 21464960 chrX 21465027 21465037 5 78 3.5 3.5 3.5 1.1 88 chrX 21464949 intergenic not near genes chrX 21464993 intergenic not near genes chrX 21465037 intergenic not near genes chrX_5_21460001 chrX_21460001 RAL-757 2543 chrX 21467018 21467044 chrX 21467102 21467116 6 81 4.5 3.0 3.8 1.2 98 chrX 21467018 intergenic CR45507 - chrX 21467067 intergenic CR45507 - chrX 21467116 intergenic CR45507 - chrX_6_21465001 chrX_21465001 RAL-757 2544 chrX 21474402 21474435 chrX 21474768 21474801 1731 16 359 3.0 3.0 3.0 4.0 399 chrX 21474402 intergenic not near genes chrX 21474602 intergenic not near genes chrX 21474801 intergenic not near genes chrX_16_21470001 chrX_21470001 RAL-757 2545 chrX 21517010 21517015 chrX 21517084 21517094 5 77 6.0 11.0 8.5 0.5 84 chrX 21517010 intron CR45082 - chrX 21517052 intron CR45082 - chrX 21517094 intron CR45082 - chrX_5_21515001 chrX_21515001 RAL-757 2546 chrX 21581564 21581570 chrX 21581640 21581651 6 79 1.5 2.0 1.8 2.1 87 chrX 21581564 intergenic not near genes chrX 21581608 intergenic not near genes chrX 21581651 intergenic not near genes chrX_6_21580001 chrX_21580001 RAL-757 2547 chrX 21668270 21668289 chrX 21668340 21668358 5 76 4.5 1.0 2.8 1.3 88 chrX 21668270 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668358 intergenic not near genes chrX_5_21665001 chrX_21665001 RAL-757 2548 chrX 22478888 22478891 chrX 22479021 22479024 4 133 0.5 9.0 4.8 0.7 136 chrX 22478888 intron CG12576 - chrX 22478956 intron CG12576 - chrX 22479024 intron CG12576 - chrX_4_22475001 chrX_22475001 RAL-757 2549 chrX 22478892 22478898 chrX 22479018 22479031 6 131 0.5 7.0 3.8 1.2 139 chrX 22478892 intron CG12576 - chrX 22478962 intron CG12576 - chrX 22479031 intron CG12576 - chrX_6_22475001 chrX_22475001 RAL-757 2550 chrX 22522650 22522660 chrX 22525442 22525464 NOF 5 2810 7.5 0.0 3.8 1.0 2814 chrX 22522650 intron CG17600 + chrX 22524057 intron CG17600 + chrX 22525464 intron CG17600 + chrX_5_22520001 chrX_22520001 RAL-757 2551 chrX 22574818 22574830 chrX 22575043 22575046 5 229 2.5 2.5 2.5 1.4 228 chrX 22574818 intergenic not near genes chrX 22574932 intergenic not near genes chrX 22575046 intergenic not near genes chrX_5_22570001 chrX_22570001 RAL-757 2552 chrX 22643128 22643143 chrX 22644044 22644049 5 911 2.0 3.5 2.8 1.3 921 chrX 22643128 intergenic not near genes chrX 22643588 intergenic not near genes chrX 22644049 intergenic not near genes chrX_5_22640001 chrX_22640001 RAL-757 2553 chrX 22661985 22662005 chrX 22662084 22662102 5 98 0.5 4.0 2.2 1.6 117 chrX 22661985 intron CR44997 + chrX 22662044 intron CR44997 + chrX 22662102 intron CR44997 + chrX_5_22660001 chrX_22660001 RAL-757 2554 chrX 22697501 22697522 chrX 22701791 22701817 Juan 8 4296 7.5 5.0 6.2 1.1 4316 chrX 22697501 intron CR44997 + chrX 22699659 intron CR44997 + chrX 22701817 intron CR44997 + chrX_8_22695001 chrX_22695001 RAL-757 2555 chrX 22764377 22764400 chrX 22764473 22764496 12 94 4.5 4.5 4.5 2.2 119 chrX 22764377 intron CR44997 + chrX 22764436 intron CR44997 + chrX 22764496 intron CR44997 + chrX_12_22760001 chrX_22760001 RAL-757 2556 chrX 22771507 22771538 chrX 22774798 22774828 297 7 3285 2.0 5.5 3.8 1.5 3321 chrX 22771507 intron CR44997 + chrX 22773168 intron CR44997 + chrX 22774828 intron CR44997 + chrX_7_22770001 chrX_22770001 RAL-757 2557 chrX 22798790 22798801 chrX 22798891 22798900 5 104 2.0 0.0 1.0 2.5 110 chrX 22798790 intergenic not near genes chrX 22798845 intergenic not near genes chrX 22798900 intergenic not near genes chrX_5_22795001 chrX_22795001 RAL-757 2558 chrX 22811991 22812003 chrX 22816763 22816775 F-element 4 4772 8.5 6.0 7.2 0.5 4784 chrX 22811991 intergenic CG12446 - chrX 22814383 intergenic not near genes chrX 22816775 intergenic not near genes chrX_4_22810001 chrX_22810001 RAL-757 2559 chrX 22894405 22894409 chrX 22895109 22895114 4 705 5.0 2.0 3.5 0.9 709 chrX 22894405 intergenic not near genes chrX 22894760 intergenic not near genes chrX 22895114 intergenic not near genes chrX_4_22890001 chrX_22890001 RAL-757 2560 chrX 22898857 22898874 chrX 22899254 22899265 5 396 2.0 0.0 1.0 2.5 408 chrX 22898857 intergenic not near genes chrX 22899061 intergenic not near genes chrX 22899265 intergenic not near genes chrX_5_22895001 chrX_22895001 RAL-757 2561 chrX 22916185 22916208 chrX 22916311 22916344 4 134 0.5 3.5 2.0 1.3 159 chrX 22916185 intergenic not near genes chrX 22916264 intergenic not near genes chrX 22916344 intergenic not near genes chrX_4_22915001 chrX_22915001 RAL-757 2562 chrX 22922526 22922543 chrX 22922605 22922610 4 76 5.5 5.0 5.2 0.6 84 chrX 22922526 intergenic not near genes chrX 22922568 intergenic not near genes chrX 22922610 intergenic not near genes chrX_4_22920001 chrX_22920001 RAL-757 2563 chrX 22967390 22967524 chrX 23154541 23154689 diver 6 187152 5.5 19.5 12.5 0.4 187299 chrX 22967390 intergenic not near genes chrX 23061040 intergenic not near genes chrX 23154689 intergenic not near genes chrX_6_23060001 chrX_23060001 RAL-757 2564 chrX 22992399 22992429 chrX 22992528 22992560 12 129 5.0 2.5 3.8 2.5 161 chrX 22992399 intron,intron stnA -,stnB - chrX 22992480 intron,intron stnA -,stnB - chrX 22992560 intron,intron stnA -,stnB - chrX_12_22990001 chrX_22990001 RAL-757 2565 chrX 22996314 22996340 chrX 23003546 23003572 roo 13 7231 3.5 6.0 4.8 2.2 7258 chrX 22996314 intron,intron stnA -,stnB - chrX 22999943 intron,intron stnA -,stnB - chrX 23003572 intron,intron stnA -,stnB - chrX_13_22995001 chrX_22995001 RAL-757 2566 chrX 22892369 22892375 chrX 23039013 23039019 4 146644 3.5 13.0 8.2 0.4 146650 chrX 22892369 intergenic not near genes chrX 22965694 intergenic not near genes chrX 23039019 intron CG12061 + chrX_4_22965001 chrX_22965001 RAL-757 2567 chrY 975797 975818 chrY 975876 975966 6 110 157.0 174.0 165.5 0.0 169 chrY 975797 intergenic not near genes chrY 975882 intergenic not near genes chrY 975966 intergenic not near genes chrY_6_975001 chrY_975001 RAL-757 2568 chrY 1419913 1419932 chrY 1420162 1420186 invader2 8 252 11.0 14.5 12.8 0.6 273 chrY 1419913 intergenic not near genes chrY 1420050 intergenic not near genes chrY 1420186 intergenic not near genes chrY_8_1420001 chrY_1420001 RAL-757 2569 chrY 1420639 1420647 chrY 1420785 1420793 4 146 4.0 14.0 9.0 0.4 154 chrY 1420639 intergenic not near genes chrY 1420716 intergenic not near genes chrY 1420793 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-757