SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	225433	225454	jockey	4968	4988	11	21	'6-5	58.35	9.9	1.0	intron	kis -	chr2L_11_225001	chr2L_225001	0.55	RAL-727
2	chr2L	260808	260865	hopper	16	7	23	57	'12-11	60.63	9.9	2.1	intron,3` UTR	CG3645 -,CG17075 -	chr2L_23_260001	chr2L_260001	0.52	RAL-727
3	chr2L	267472	267545	P-element	1	2884	20	73	'7-13	52.48	6.2	2.8	intron,5` UTR	CG3645 -,CG17075 -	chr2L_20_265001	chr2L_265001	0.35	RAL-727
4	chr2L	507740	507816	Quasimodo	5	7366	10	76	'1-9	65.63	8.0	1.1	intron	ush +	chr2L_10_505001	chr2L_505001	0.10	RAL-727
5	chr2L	909812	909890	roo	8670	412	25	78	'8-17	64.93	6.2	3.5	intergenic	not near genes	chr2L_25_905001	chr2L_905001	0.32	RAL-727
6	chr2L	1303835	1303904	3S18	6105	3	10	69	'7-3	58.53	4.9	1.7	intergenic	not near genes	chr2L_10_1300001	chr2L_1300001	0.70	RAL-727
7	chr2L	1533894	1533956	BS	5085	4792	22	62	'7-15	64.36	7.1	2.7	intergenic	not near genes	chr2L_22_1530001	chr2L_1530001	0.32	RAL-727
8	chr2L	1656030	1656103	pogo	8	2099	15	73	'4-11	64.26	8.8	1.5	intron	chinmo +	chr2L_15_1655001	chr2L_1655001	0.27	RAL-727
9	chr2L	1736388	1736471	roo	8663	410	40	83	'17-23	67.55	10.0	3.6	intron	CG17646 +	chr2L_40_1735001	chr2L_1735001	0.42	RAL-727
10	chr2L	1909558	1909654	pogo	3	2098	17	96	'10-7	66.86	5.0	2.8	intron	CG7337 +	chr2L_17_1905001	chr2L_1905001	0.59	RAL-727
11	chr2L	2176352	2176400	S-element	1708	5	7	48	'1-6	68.52	3.8	1.5	intron	aop -	chr2L_7_2175001	chr2L_2175001	0.14	RAL-727
12	chr2L	2561958	2561974	hobo	6	14	8	16	'7-1	58.06	12.3	0.6	intergenic	not near genes	chr2L_8_2560001	chr2L_2560001	0.88	RAL-727
13	chr2L	2864439	2864501	Stalker2	404	7268	23	62	'14-9	65.59	9.4	2.2	intron	CG2991 +	chr2L_23_2860001	chr2L_2860001	0.61	RAL-727
14	chr2L	3428904	3428969	mdg1	417	12	16	65	'11-5	65.12	7.3	1.9	intergenic	not near genes	chr2L_16_3425001	chr2L_3425001	0.69	RAL-727
15	chr2L	3775576	3775647	3S18	331	5765	25	71	'10-15	59.62	7.5	2.9	intron	bowl +	chr2L_25_3775001	chr2L_3775001	0.40	RAL-727
16	chr2L	3786719	3786749	jockey	4785	4759	14	30	'7-7	61.96	7.9	1.6	intergenic	CG31958 +,CG3921 +	chr2L_14_3785001	chr2L_3785001	0.50	RAL-727
17	chr2L	3923143	3923209	412	14	7545	13	66	'5-8	57.67	6.6	1.7	intron	fred -	chr2L_13_3920001	chr2L_3920001	0.38	RAL-727
18	chr2L	4009438	4009517	pogo	2100	4	11	79	'7-4	66.45	6.5	1.5	intergenic	CG43774 +	chr2L_11_4005001	chr2L_4005001	0.64	RAL-727
19	chr2L	4018990	4019008	jockey	23	11	6	18	'3-3	56.53	10.2	0.5	intergenic	not near genes	chr2L_6_4015001	chr2L_4015001	0.50	RAL-727
20	chr2L	4106408	4106441	jockey	32	6	13	33	'6-7	62.27	10.4	1.1	intron	ed +	chr2L_13_4105001	chr2L_4105001	0.46	RAL-727
21	chr2L	4245855	4245913	jockey	4987	6	19	58	'13-6	60.41	8.0	2.1	intergenic	CR44059 -	chr2L_19_4245001	chr2L_4245001	0.68	RAL-727
22	chr2L	4438362	4438395	jockey	4666	4684	11	33	'7-4	58.89	12.6	0.8	intron	CG15431 -	chr2L_11_4435001	chr2L_4435001	0.64	RAL-727
23	chr2L	5371260	5371325	3S18	327	5766	18	65	'7-11	60.74	3.2	4.3	intergenic	not near genes	chr2L_18_5370001	chr2L_5370001	0.39	RAL-727
24	chr2L	5385541	5385627	opus	498	108	21	86	'11-10	66.55	5.9	3.0	intergenic	not near genes	chr2L_21_5385001	chr2L_5385001	0.52	RAL-727
25	chr2L	5664430	5664510	roo	411	8666	27	80	'10-17	65.52	8.3	2.9	intron	Hsp60C +	chr2L_27_5660001	chr2L_5660001	0.37	RAL-727
26	chr2L	5749019	5749094	HMS-Beagle	6801	247	16	75	'7-9	66.64	5.1	2.6	intron	CG11030 +	chr2L_16_5745001	chr2L_5745001	0.44	RAL-727
27	chr2L	5805237	5805259	jockey	13	30	14	22	'5-9	55.56	1.0	7.0	intergenic	CG11034 +	chr2L_14_5805001	chr2L_5805001	0.36	RAL-727
28	chr2L	5862060	5862086	F-element	24	14	8	26	'6-2	64.71	7.0	1.0	intron	rau -	chr2L_8_5860001	chr2L_5860001	0.75	RAL-727
29	chr2L	6108270	6108334	roo	8664	397	17	64	'10-7	65.60	9.8	1.6	intron	stai +	chr2L_17_6105001	chr2L_6105001	0.59	RAL-727
30	chr2L	6519745	6519814	roo	8664	9061	29	69	'19-10	63.61	10.3	2.6	intron	CG31637 +	chr2L_29_6515001	chr2L_6515001	0.66	RAL-727
31	chr2L	6813259	6813296	roo	33	8661	13	37	'9-4	65.92	3.0	3.2	intergenic	CR44081 +	chr2L_13_6810001	chr2L_6810001	0.69	RAL-727
32	chr2L	7644826	7644905	roo	406	8663	31	79	'17-14	66.21	7.9	3.5	intron	Slob -	chr2L_31_7640001	chr2L_7640001	0.55	RAL-727
33	chr2L	7750431	7750497	pogo	2	2100	17	66	'8-9	67.50	7.4	2.0	intergenic	not near genes	chr2L_17_7750001	chr2L_7750001	0.47	RAL-727
34	chr2L	7797853	7797906	roo	8669	407	21	53	'4-17	69.40	6.3	2.9	intron	Herp -	chr2L_21_7795001	chr2L_7795001	0.19	RAL-727
35	chr2L	7928521	7928598	roo	406	8665	19	77	'6-13	62.26	11.2	1.6	intron	Snoo -	chr2L_19_7925001	chr2L_7925001	0.32	RAL-727
36	chr2L	8534522	8534545	jockey	4673	4680	5	23	'4-1	59.96	13.0	0.4	intron	CG17834 +	chr2L_5_8530001	chr2L_8530001	0.80	RAL-727
37	chr2L	8992510	8992697	pogo	88	2097	18	187	'1-17	68.23	5.0	3.0	intron	CG9555 +	chr2L_18_8990001	chr2L_8990001	0.06	RAL-727
38	chr2L	9018357	9018421	copia	13	251	23	64	'11-12	66.31	2.6	6.4	intergenic	not near genes	chr2L_23_9015001	chr2L_9015001	0.48	RAL-727
39	chr2L	9025155	9025208	hobo	14	2937	15	53	'11-4	63.04	6.1	2.1	exon	CG9582 -	chr2L_15_9025001	chr2L_9025001	0.73	RAL-727
40	chr2L	9059328	9059401	roo	8670	407	17	73	'7-10	66.05	5.9	2.5	intron	CG31708 -	chr2L_17_9055001	chr2L_9055001	0.41	RAL-727
41	chr2L	9113271	9113343	roo	11	410	17	72	'9-8	61.61	10.9	1.4	exon	Or30a +	chr2L_17_9110001	chr2L_9110001	0.53	RAL-727
42	chr2L	9204623	9204702	Transpac	308	1	37	79	'24-13	64.50	8.4	3.9	intron	tai +	chr2L_37_9200001	chr2L_9200001	0.65	RAL-727
43	chr2L	9361848	9361922	roo	8664	406	17	74	'8-9	65.36	5.3	2.7	intergenic	not near genes	chr2L_17_9360001	chr2L_9360001	0.47	RAL-727
44	chr2L	9705125	9705211	roo	8664	414	32	86	'15-17	65.34	12.5	2.4	intron,intron	pelo +,CG31710 -	chr2L_32_9705001	chr2L_9705001	0.47	RAL-727
45	chr2L	9749698	9749777	mdg3	5498	5254	27	79	'12-15	62.82	7.8	3.1	intron	Cyp4e3 -	chr2L_27_9745001	chr2L_9745001	0.44	RAL-727
46	chr2L	9887358	9887440	roo	8665	411	40	82	'20-20	70.55	6.3	5.5	5` UTR	CR44701 +	chr2L_40_9885001	chr2L_9885001	0.50	RAL-727
47	chr2L	10305053	10305133	copia	254	4868	8	80	'4-4	63.62	6.4	1.1	exon	CG5390 -	chr2L_8_10305001	chr2L_10305001	0.50	RAL-727
48	chr2L	10621192	10621270	roo	407	1	22	78	'12-10	70.15	9.1	2.2	intron	Trim9 +	chr2L_22_10620001	chr2L_10620001	0.55	RAL-727
49	chr2L	10850954	10851091	invader4	2673	2671	5	137	'2-3	80.80	3.9	1.0	intron	CG43129 +	chr2L_5_10850001	chr2L_10850001	0.40	RAL-727
50	chr2L	11534412	11534462	copia	236	11	16	50	'5-11	60.51	5.8	2.4	3` UTR	CR42743 -	chr2L_16_11530001	chr2L_11530001	0.31	RAL-727
51	chr2L	11580584	11580646	412	7542	15	15	62	'8-7	66.86	9.5	1.4	intergenic	not near genes	chr2L_15_11580001	chr2L_11580001	0.53	RAL-727
52	chr2L	12261027	12261049	BS	17	1	11	22	'6-5	54.69	5.7	1.6	intron	aret +	chr2L_11_12260001	chr2L_12260001	0.55	RAL-727
53	chr2L	12287896	12287953	Transpac	5204	4918	16	57	'3-13	64.56	5.1	2.6	intron	aret +	chr2L_16_12285001	chr2L_12285001	0.19	RAL-727
54	chr2L	12290981	12291062	roo	8663	408	26	81	'16-10	62.64	7.4	3.1	intron	aret +	chr2L_26_12290001	chr2L_12290001	0.62	RAL-727
55	chr2L	12478981	12479004	I-element	5327	5350	6	23	'3-3	65.42	2.3	1.8	intron	bun -	chr2L_6_12475001	chr2L_12475001	0.50	RAL-727
56	chr2L	13208567	13208633	roo	402	12	29	66	'11-18	62.90	16.9	1.6	intron	Pect +	chr2L_29_13205001	chr2L_13205001	0.38	RAL-727
57	chr2L	13317086	13317140	roo	403	16	11	54	'7-4	65.86	9.5	1.0	intron	CG43778 -	chr2L_11_13315001	chr2L_13315001	0.64	RAL-727
58	chr2L	13555205	13555280	copia	4871	252	28	75	'10-18	65.89	7.7	3.2	intron	kuz +	chr2L_28_13555001	chr2L_13555001	0.36	RAL-727
59	chr2L	13593157	13593237	roo	8663	9070	34	80	'21-13	64.40	7.6	4.0	intron	kuz +	chr2L_34_13590001	chr2L_13590001	0.62	RAL-727
60	chr2L	13696538	13696614	roo	408	8667	18	76	'10-8	62.76	8.9	1.8	intron	CG31814 -	chr2L_18_13695001	chr2L_13695001	0.56	RAL-727
61	chr2L	13887669	13887750	roo	8664	409	21	81	'12-9	67.78	8.7	2.2	intron	CenG1A +	chr2L_21_13885001	chr2L_13885001	0.57	RAL-727
62	chr2L	14501073	14501151	diver	5889	223	24	78	'12-12	57.58	4.8	4.1	intergenic	not near genes	chr2L_24_14500001	chr2L_14500001	0.50	RAL-727
63	chr2L	14675787	14675845	FB	1	12	29	58	'16-13	67.59	7.4	3.5	intron	osp -	chr2L_29_14675001	chr2L_14675001	0.55	RAL-727
64	chr2L	14874143	14874218	rover	6950	7291	18	75	'11-7	67.92	9.2	1.8	intergenic	CG15278 -	chr2L_18_14870001	chr2L_14870001	0.61	RAL-727
65	chr2L	14940415	14940485	hopper	2	9	10	70	'5-5	62.75	5.2	1.6	intron	CG42313 -	chr2L_10_14940001	chr2L_14940001	0.50	RAL-727
66	chr2L	14978190	14978219	Doc	9	37	14	29	'7-7	67.30	8.7	1.4	intron	mol -	chr2L_14_14975001	chr2L_14975001	0.50	RAL-727
67	chr2L	15055444	15055478	Tabor	486	7323	20	34	'11-9	59.78	17.1	1.1	intron	ck -	chr2L_20_15055001	chr2L_15055001	0.55	RAL-727
68	chr2L	15096915	15096965	jockey	4988	4758	5	50	'3-2	66.59	4.3	0.9	3` UTR	CG15270 +	chr2L_5_15095001	chr2L_15095001	0.60	RAL-727
69	chr2L	15142248	15142308	BS	4703	5081	18	60	'11-7	67.59	5.4	2.8	intergenic	not near genes	chr2L_18_15140001	chr2L_15140001	0.61	RAL-727
70	chr2L	15219827	15219854	hopper	5	20	4	27	'3-1	62.65	8.1	0.4	intergenic	not near genes	chr2L_4_15215001	chr2L_15215001	0.75	RAL-727
71	chr2L	15243620	15243685	412	12	7542	15	65	'9-6	65.13	3.4	3.4	intron	ZnT35C -	chr2L_15_15240001	chr2L_15240001	0.60	RAL-727
72	chr2L	15355229	15355256	Doc	5	3	7	27	'6-1	65.18	8.1	0.8	intergenic	not near genes	chr2L_7_15355001	chr2L_15355001	0.86	RAL-727
73	chr2L	15937335	15937401	hopper	1412	257	13	66	'12-1	67.43	6.2	1.8	intron	beat-Ib -	chr2L_13_15935001	chr2L_15935001	0.92	RAL-727
74	chr2L	15964136	15964199	Juan	4208	3	19	63	'10-9	59.30	8.2	2.1	intergenic	not near genes	chr2L_19_15960001	chr2L_15960001	0.53	RAL-727
75	chr2L	16153093	16153138	I-element	6	5334	13	45	'11-2	65.77	10.4	1.1	intergenic	not near genes	chr2L_13_16150001	chr2L_16150001	0.85	RAL-727
76	chr2L	16232796	16232812	roo	393	409	7	16	'2-5	47.32	5.8	1.0	intron	CG42817 +	chr2L_7_16230001	chr2L_16230001	0.29	RAL-727
77	chr2L	16351519	16351550	transib3	56	57	4	31	'1-3	64.22	10.6	0.3	intron,intron	CG42231 -,chif -	chr2L_4_16350001	chr2L_16350001	0.25	RAL-727
78	chr2L	16539575	16539654	copia	254	4869	21	79	'10-11	68.08	7.6	2.4	intergenic	not near genes	chr2L_21_16535001	chr2L_16535001	0.48	RAL-727
79	chr2L	17093707	17093771	copia	1	251	13	64	'4-9	65.02	6.0	1.9	intergenic	not near genes	chr2L_13_17090001	chr2L_17090001	0.31	RAL-727
80	chr2L	17106037	17106118	mdg1	7459	7038	18	81	'12-6	66.06	5.0	3.0	intergenic	CR45448 +	chr2L_18_17105001	chr2L_17105001	0.67	RAL-727
81	chr2L	17266281	17266373	HMS-Beagle	6795	246	10	92	'7-3	63.08	3.5	2.2	intergenic	not near genes	chr2L_10_17265001	chr2L_17265001	0.70	RAL-727
82	chr2L	17353156	17353185	297	6580	28	11	29	'8-3	68.20	8.7	1.1	intergenic	not near genes	chr2L_11_17350001	chr2L_17350001	0.73	RAL-727
83	chr2L	17353212	17353245	HMS-Beagle	227	246	11	33	'6-5	69.64	6.7	1.4	intergenic	not near genes	chr2L_11_17350001	chr2L_17350001	0.55	RAL-727
84	chr2L	17356697	17356767	flea	246	4756	8	70	'4-4	69.73	5.6	1.2	intergenic	not near genes	chr2L_8_17355001	chr2L_17355001	0.50	RAL-727
85	chr2L	17994446	17994467	F-element	202	196	9	21	'3-6	54.58	12.6	0.7	intergenic	CR44767 -	chr2L_9_17990001	chr2L_17990001	0.33	RAL-727
86	chr2L	18099211	18099293	roo	8663	409	23	82	'17-6	66.80	5.6	3.5	intergenic	not near genes	chr2L_23_18095001	chr2L_18095001	0.74	RAL-727
87	chr2L	18176492	18176576	Burdock	6135	256	32	84	'19-13	67.84	9.4	3.1	intron	CG42750 -	chr2L_32_18175001	chr2L_18175001	0.59	RAL-727
88	chr2L	18436194	18436255	Juan	4200	4066	29	61	'13-16	63.52	7.0	3.6	intergenic	not near genes	chr2L_29_18435001	chr2L_18435001	0.45	RAL-727
89	chr2L	18538468	18538500	roo	33	1	22	32	'13-9	68.16	1.1	10.5	intron	Pde11 -	chr2L_22_18535001	chr2L_18535001	0.59	RAL-727
90	chr2L	18652073	18652156	roo	8660	407	27	83	'17-10	64.05	7.5	3.2	intron,exon	MESR3 +,Cyp310a1 -	chr2L_27_18650001	chr2L_18650001	0.63	RAL-727
91	chr2L	18671632	18671712	mdg1	7038	420	20	80	'8-12	68.23	5.5	3.1	3` UTR	CG43339 -	chr2L_20_18670001	chr2L_18670001	0.40	RAL-727
92	chr2L	18729401	18729480	pogo	1	2098	18	79	'7-11	63.00	3.7	3.8	intron	CG10348 -	chr2L_18_18725001	chr2L_18725001	0.39	RAL-727
93	chr2L	18814530	18814556	Doc	6	32	14	26	'8-6	59.24	8.3	1.5	intergenic	not near genes	chr2L_14_18810001	chr2L_18810001	0.57	RAL-727
94	chr2L	18875977	18876029	HMS-Beagle	247	6804	15	52	'10-5	65.17	7.6	1.7	intron	tup -	chr2L_15_18875001	chr2L_18875001	0.67	RAL-727
95	chr2L	19198841	19198919	roo	8662	404	33	78	'23-10	67.51	6.8	4.2	intron	drl +	chr2L_33_19195001	chr2L_19195001	0.70	RAL-727
96	chr2L	19215889	19215976	roo	8662	413	36	87	'19-17	66.63	5.5	5.5	intergenic	not near genes	chr2L_36_19215001	chr2L_19215001	0.53	RAL-727
97	chr2L	19297103	19297168	mdg1	14	7458	16	65	'5-11	67.35	5.3	2.5	intergenic	not near genes	chr2L_16_19295001	chr2L_19295001	0.31	RAL-727
98	chr2L	19429121	19429200	roo	411	8668	11	79	'9-2	66.75	6.2	1.5	intron,3` UTR	CG13085 +,CG16771 +	chr2L_11_19425001	chr2L_19425001	0.82	RAL-727
99	chr2L	19635639	19635719	hobo	2707	2	29	80	'7-22	63.79	9.6	2.7	intron	Lar +	chr2L_29_19635001	chr2L_19635001	0.24	RAL-727
100	chr2L	19682016	19682082	hobo	3	2930	11	66	'8-3	60.67	5.4	1.7	intron	Lar +	chr2L_11_19680001	chr2L_19680001	0.73	RAL-727
101	chr2L	19811944	19811974	P-element	2885	32	13	30	'7-6	49.64	6.8	1.7	intron	sick +	chr2L_13_19810001	chr2L_19810001	0.54	RAL-727
102	chr2L	19859430	19859500	mdg3	5254	237	18	70	'15-3	61.83	7.6	2.1	intron	sick +	chr2L_18_19855001	chr2L_19855001	0.83	RAL-727
103	chr2L	19940125	19940178	HMS-Beagle	3	220	18	53	'13-5	67.66	3.4	4.1	intron	sick +	chr2L_18_19940001	chr2L_19940001	0.72	RAL-727
104	chr2L	20128682	20128733	I-element	2	5341	18	51	'12-6	59.31	8.3	1.9	intergenic	not near genes	chr2L_18_20125001	chr2L_20125001	0.67	RAL-727
105	chr2L	20143898	20143927	Doc	36	7	25	29	'14-11	62.82	9.5	2.4	intergenic	not near genes	chr2L_25_20140001	chr2L_20140001	0.56	RAL-727
106	chr2L	20213603	20213627	transib2	2817	2792	12	24	'8-4	58.38	12.8	0.9	intergenic	not near genes	chr2L_12_20210001	chr2L_20210001	0.67	RAL-727
107	chr2L	20264589	20264672	copia	4868	257	17	83	'12-5	63.00	5.7	2.5	intergenic	CG17570 -	chr2L_17_20260001	chr2L_20260001	0.71	RAL-727
108	chr2L	20529470	20529547	412	497	8	27	77	'14-13	63.95	4.8	4.7	intergenic	not near genes	chr2L_27_20525001	chr2L_20525001	0.52	RAL-727
109	chr2L	20606249	20606276	Doc	30	3	7	27	'5-2	62.15	6.0	1.0	intron	CR44909 -	chr2L_7_20605001	chr2L_20605001	0.71	RAL-727
110	chr2L	20986791	20986873	Transpac	1	311	42	82	'18-24	65.52	9.3	4.1	intron	CG42238 -	chr2L_42_20985001	chr2L_20985001	0.43	RAL-727
111	chr2L	21215329	21215363	jockey	4781	4758	9	34	'5-4	67.61	8.2	1.0	intron	Atg18b -	chr2L_9_21215001	chr2L_21215001	0.56	RAL-727
112	chr2L	21278734	21278810	roo	405	2	14	76	'3-11	67.17	8.0	1.6	intron	CG8671 +	chr2L_14_21275001	chr2L_21275001	0.21	RAL-727
113	chr2L	21319113	21319187	pogo	2	2094	19	74	'10-9	63.73	9.1	1.9	3` UTR	crc +	chr2L_19_21315001	chr2L_21315001	0.53	RAL-727
114	chr2L	21570226	21570255	Dm88	4375	4361	18	29	'9-9	66.92	4.0	3.6	intergenic	not near genes	chr2L_18_21570001	chr2L_21570001	0.50	RAL-727
115	chr2L	21928666	21928724	roo	8682	405	18	58	'7-11	69.59	5.0	3.0	intergenic	not near genes	chr2L_18_21925001	chr2L_21925001	0.39	RAL-727
116	chr2L	21957372	21957453	412	497	3	16	81	'10-6	61.38	8.4	1.7	intergenic	CR44217 +	chr2L_16_21955001	chr2L_21955001	0.62	RAL-727
117	chr2L	22077704	22077761	accord	7371	1	9	57	'3-6	67.20	6.6	1.2	intergenic	not near genes	chr2L_9_22075001	chr2L_22075001	0.33	RAL-727
118	chr2L	22092976	22092991	INE-1	531	546	7	15	'3-4	55.35	11.4	0.6	intergenic	not near genes	chr2L_7_22090001	chr2L_22090001	0.43	RAL-727
119	chr2L	22224542	22224559	Rt1c	5405	5422	6	17	'2-4	57.22	0.4	4.3	intergenic	not near genes	chr2L_6_22220001	chr2L_22220001	0.33	RAL-727
120	chr2L	22497768	22497833	Stalker4	406	6965	19	65	'7-12	62.85	2.6	5.3	intergenic	not near genes	chr2L_19_22495001	chr2L_22495001	0.37	RAL-727
121	chr2L	22497809	22497838	Stalker	30	6853	5	29	'4-1	68.03	4.3	0.9	intergenic	not near genes	chr2L_5_22495001	chr2L_22495001	0.80	RAL-727
122	chr2L	22507320	22507391	Tabor	487	12	7	71	'6-1	60.84	4.0	1.4	intergenic	not near genes	chr2L_7_22505001	chr2L_22505001	0.86	RAL-727
123	chr2L	22525800	22525816	springer	165	181	4	16	'3-1	51.96	4.2	0.8	intergenic	not near genes	chr2L_4_22525001	chr2L_22525001	0.75	RAL-727
124	chr2L	22758834	22758861	INE-1	97	7	4	27	'3-1	68.98	13.8	0.3	intergenic	not near genes	chr2L_4_22755001	chr2L_22755001	0.75	RAL-727
125	chr2L	22775547	22775566	pogo	2080	2099	6	19	'4-2	65.24	6.4	0.8	intergenic	not near genes	chr2L_6_22775001	chr2L_22775001	0.67	RAL-727
126	chr2L	23295842	23295861	micropia	4981	4962	5	19	'2-3	60.24	6.1	0.7	intergenic	not near genes	chr2L_5_23295001	chr2L_23295001	0.40	RAL-727
127	chr2R	330147	330208	HMS-Beagle2	7173	6881	12	61	'6-6	69.64	3.6	2.6	intergenic	not near genes	chr2R_12_330001	chr2R_330001	0.50	RAL-727
128	chr2R	657681	657735	opus	7500	7025	11	54	'10-1	70.39	4.5	2.0	intergenic	not near genes	chr2R_11_655001	chr2R_655001	0.91	RAL-727
129	chr2R	924848	924907	Transpac	290	1	14	59	'8-6	66.35	9.0	1.4	3` UTR	CG40498 -	chr2R_14_920001	chr2R_920001	0.57	RAL-727
130	chr2R	954204	954228	jockey	4836	4857	11	24	'5-6	60.61	8.0	1.2	intergenic	not near genes	chr2R_11_950001	chr2R_950001	0.45	RAL-727
131	chr2R	1522956	1523055	FB	795	893	6	99	'2-4	67.38	15.0	0.4	intron	Maf1 -	chr2R_6_1520001	chr2R_1520001	0.33	RAL-727
132	chr2R	2879430	2879464	Stalker	129	147	5	34	'3-2	64.67	18.4	0.3	intergenic	not near genes	chr2R_5_2875001	chr2R_2875001	0.60	RAL-727
133	chr2R	3068105	3068183	412	494	4	19	78	'3-16	63.79	4.5	3.5	intron	CG42596 +	chr2R_19_3065001	chr2R_3065001	0.16	RAL-727
134	chr2R	3146436	3146467	rover	7142	7070	6	31	'1-5	56.56	14.2	0.4	intron	CG42596 +	chr2R_6_3145001	chr2R_3145001	0.17	RAL-727
135	chr2R	3523842	3523873	Cr1a	4001	4008	8	31	'5-3	58.67	5.3	1.3	intergenic	not near genes	chr2R_8_3520001	chr2R_3520001	0.62	RAL-727
136	chr2R	3594174	3594218	pogo	2072	11	5	44	'1-4	72.11	8.1	0.5	intergenic	not near genes	chr2R_5_3590001	chr2R_3590001	0.20	RAL-727
137	chr2R	3919664	3919683	1360	6	24	7	19	'4-3	60.21	12.9	0.5	intron	uex -	chr2R_7_3915001	chr2R_3915001	0.57	RAL-727
138	chr2R	4188988	4189074	S-element	1706	1707	8	86	'6-2	60.48	5.5	1.2	intergenic	not near genes	chr2R_8_4185001	chr2R_4185001	0.75	RAL-727
139	chr2R	4261946	4262014	gypsy	6991	7439	26	68	'12-14	61.21	8.1	2.9	intergenic	not near genes	chr2R_26_4260001	chr2R_4260001	0.46	RAL-727
140	chr2R	4265352	4265431	flea	4757	253	33	79	'17-16	64.48	8.4	3.5	intergenic	not near genes	chr2R_33_4265001	chr2R_4265001	0.52	RAL-727
141	chr2R	4673578	4673653	Quasimodo	7363	7362	7	75	'4-3	64.00	7.0	0.9	3` UTR	CG17883 +	chr2R_7_4670001	chr2R_4670001	0.57	RAL-727
142	chr2R	4707045	4707060	pogo	2085	2099	4	15	'3-1	59.56	5.9	0.6	intron	Nipped-B -	chr2R_4_4705001	chr2R_4705001	0.75	RAL-727
143	chr2R	4736826	4736854	Doc2-element	4633	4643	12	28	'9-3	61.03	4.1	2.4	intergenic	not near genes	chr2R_12_4735001	chr2R_4735001	0.75	RAL-727
144	chr2R	4896021	4896104	Transpac	4918	311	37	83	'18-19	67.46	7.2	4.5	intron	CG44102 -	chr2R_37_4895001	chr2R_4895001	0.49	RAL-727
145	chr2R	5173180	5173211	Stalker4	379	410	14	31	'8-6	60.84	4.4	2.6	intergenic	not near genes	chr2R_14_5170001	chr2R_5170001	0.57	RAL-727
146	chr2R	5452850	5452934	copia	258	4868	17	84	'7-10	62.51	6.7	2.2	intron	laccase2 +	chr2R_17_5450001	chr2R_5450001	0.41	RAL-727
147	chr2R	5485062	5485138	1360	3388	2	25	76	'16-9	66.97	8.6	2.6	intron	CG30440 -	chr2R_25_5485001	chr2R_5485001	0.64	RAL-727
148	chr2R	5531165	5531184	1360	70	51	10	19	'6-4	54.42	6.8	1.3	intron	CG30438 +	chr2R_10_5530001	chr2R_5530001	0.60	RAL-727
149	chr2R	5674651	5674729	S-element	1712	6	12	78	'1-11	67.37	5.3	1.9	intergenic	not near genes	chr2R_12_5670001	chr2R_5670001	0.08	RAL-727
150	chr2R	5712604	5712686	Quasimodo	7366	1	16	82	'2-14	62.14	7.1	2.0	intron	ap -	chr2R_16_5710001	chr2R_5710001	0.12	RAL-727
151	chr2R	5840638	5840695	Ivk	5369	1	19	57	'6-13	61.42	7.5	2.2	intron	dpr12 +	chr2R_19_5840001	chr2R_5840001	0.32	RAL-727
152	chr2R	5842362	5842421	I-element	2	5345	13	59	'8-5	58.75	8.8	1.3	intron	dpr12 +	chr2R_13_5840001	chr2R_5840001	0.62	RAL-727
153	chr2R	5950692	5950761	mdg1	7046	7459	20	69	'5-15	64.10	5.7	3.0	intergenic	not near genes	chr2R_20_5950001	chr2R_5950001	0.25	RAL-727
154	chr2R	5953088	5953165	pogo	3	2097	9	77	'7-2	62.61	5.2	1.5	intergenic	not near genes	chr2R_9_5950001	chr2R_5950001	0.78	RAL-727
155	chr2R	6223278	6223299	S-element	6	1691	5	21	'3-2	65.51	5.1	0.8	intron	bin3 +	chr2R_5_6220001	chr2R_6220001	0.60	RAL-727
156	chr2R	6234327	6234424	INE-1	84	85	5	97	'2-3	62.93	5.4	0.8	intron	bin3 +	chr2R_5_6230001	chr2R_6230001	0.40	RAL-727
157	chr2R	6565258	6565289	F-element	11	43	7	31	'5-2	60.60	8.3	0.8	intron	jing +	chr2R_7_6565001	chr2R_6565001	0.71	RAL-727
158	chr2R	6779770	6779839	17.6	7414	8	24	69	'18-6	66.56	9.1	2.4	intron,3` UTR	Epac -,Cyp6a2 -	chr2R_24_6775001	chr2R_6775001	0.75	RAL-727
159	chr2R	6861377	6861445	412	7536	2	20	68	'5-15	67.92	7.4	2.4	intergenic	not near genes	chr2R_20_6860001	chr2R_6860001	0.25	RAL-727
160	chr2R	6861883	6861965	blood	7010	7389	18	82	'7-11	64.99	6.6	2.4	intergenic	coro -	chr2R_18_6860001	chr2R_6860001	0.39	RAL-727
161	chr2R	6894620	6894658	roo	22	8659	10	38	'5-5	68.70	5.7	1.5	intron	CG30158 +	chr2R_10_6890001	chr2R_6890001	0.50	RAL-727
162	chr2R	7413228	7413278	I-element	5346	6	11	50	'4-7	58.79	7.2	1.3	intergenic	not near genes	chr2R_11_7410001	chr2R_7410001	0.36	RAL-727
163	chr2R	7514004	7514060	Tc3	316	309	7	56	'2-5	64.11	8.7	0.7	3` UTR	CG1603 -	chr2R_7_7510001	chr2R_7510001	0.29	RAL-727
164	chr2R	7568260	7568286	F-element	11	41	10	26	'6-4	57.99	7.7	1.1	intron	Vps13 +	chr2R_10_7565001	chr2R_7565001	0.60	RAL-727
165	chr2R	7749748	7749821	roo	8664	402	27	73	'14-13	67.42	10.3	2.4	intron,intron	CG30497 -,CG45093 -	chr2R_27_7745001	chr2R_7745001	0.52	RAL-727
166	chr2R	7858778	7858859	roo	4	413	31	81	'16-15	63.31	8.5	3.3	intron	Dgk -	chr2R_31_7855001	chr2R_7855001	0.52	RAL-727
167	chr2R	8058394	8058463	412	2	493	19	69	'12-7	64.02	6.7	2.5	intron	CG12769 -	chr2R_19_8055001	chr2R_8055001	0.63	RAL-727
168	chr2R	8159103	8159130	mdg1	7060	1	7	27	'4-3	65.24	9.0	0.7	intergenic	CG8708 -	chr2R_7_8155001	chr2R_8155001	0.57	RAL-727
169	chr2R	8175710	8175796	Tirant	8104	402	28	86	'9-19	65.69	7.2	3.4	intron	LRP1 +	chr2R_28_8175001	chr2R_8175001	0.32	RAL-727
170	chr2R	8186777	8186845	FB	2	4	23	68	'8-15	64.37	4.9	3.9	intron	LRP1 +	chr2R_23_8185001	chr2R_8185001	0.35	RAL-727
171	chr2R	8328006	8328083	S-element	3	4	12	77	'8-4	64.91	5.4	1.9	5` UTR	pdm3 +	chr2R_12_8325001	chr2R_8325001	0.67	RAL-727
172	chr2R	8615715	8615735	G6	27	6	4	20	'2-2	59.66	12.6	0.3	intron	Cirl +	chr2R_4_8615001	chr2R_8615001	0.50	RAL-727
173	chr2R	8786285	8786361	HMS-Beagle	6794	239	24	76	'19-5	64.29	6.1	3.4	intergenic	not near genes	chr2R_24_8785001	chr2R_8785001	0.79	RAL-727
174	chr2R	9408180	9408230	FB	2	20	15	50	'7-8	63.66	9.7	1.4	intron	wun -	chr2R_15_9405001	chr2R_9405001	0.47	RAL-727
175	chr2R	9870972	9871056	roo	411	8663	25	84	'15-10	67.41	7.6	2.9	intron	cbx -	chr2R_25_9870001	chr2R_9870001	0.60	RAL-727
176	chr2R	10383254	10383375	mdg1	7075	37	5	121	'3-2	72.14	6.6	0.7	intron	CG42732 -	chr2R_5_10380001	chr2R_10380001	0.60	RAL-727
177	chr2R	10413088	10413154	FB	5	1	19	66	'11-8	67.40	3.4	4.3	intron	CG42732 -	chr2R_19_10410001	chr2R_10410001	0.58	RAL-727
178	chr2R	10657365	10657426	roo	14	405	23	61	'9-14	61.36	6.6	3.0	3` UTR	CR44452 -	chr2R_23_10655001	chr2R_10655001	0.39	RAL-727
179	chr2R	10945021	10945101	297	3	395	17	80	'4-13	71.22	7.0	2.1	intergenic	not near genes	chr2R_17_10945001	chr2R_10945001	0.24	RAL-727
180	chr2R	11034109	11034178	1360	8	1	14	69	'9-5	65.45	5.5	2.2	intron	luna -	chr2R_14_11030001	chr2R_11030001	0.64	RAL-727
181	chr2R	11187907	11187984	Juan	404	4211	21	77	'11-10	61.33	7.3	2.5	intron	shn +	chr2R_21_11185001	chr2R_11185001	0.52	RAL-727
182	chr2R	11398055	11398126	P-element	2886	2882	26	71	'14-12	50.43	11.2	2.1	intergenic	not near genes	chr2R_26_11395001	chr2R_11395001	0.54	RAL-727
183	chr2R	11438487	11438573	Juan	4076	4205	28	86	'18-10	61.38	9.4	2.7	intron	CG7777 +	chr2R_28_11435001	chr2R_11435001	0.64	RAL-727
184	chr2R	11501564	11501594	Tirant	8111	8137	7	30	'4-3	65.19	2.8	1.8	intron	inv +	chr2R_7_11500001	chr2R_11500001	0.57	RAL-727
185	chr2R	11575032	11575173	INE-1	148	133	15	141	'5-10	57.80	1.4	6.2	intergenic	not near genes	chr2R_15_11575001	chr2R_11575001	0.33	RAL-727
186	chr2R	11606591	11606665	FB	1	1	23	74	'14-9	62.95	8.4	2.4	intron	tou -	chr2R_23_11605001	chr2R_11605001	0.61	RAL-727
187	chr2R	11659059	11659132	1360	1	1	44	73	'30-14	66.03	14.8	2.8	intron	Roc2 -	chr2R_44_11655001	chr2R_11655001	0.68	RAL-727
188	chr2R	11945278	11945336	mdg1	7440	6	4	58	'1-3	58.00	3.0	1.0	intron	CG13188 +	chr2R_4_11945001	chr2R_11945001	0.25	RAL-727
189	chr2R	12058941	12059023	roo	411	8665	28	82	'15-13	65.38	11.7	2.2	intron	Drep-3 +	chr2R_28_12055001	chr2R_12055001	0.54	RAL-727
190	chr2R	12081274	12081353	roo	8667	410	11	79	'9-2	69.33	6.5	1.5	intergenic	CG13186 +	chr2R_11_12080001	chr2R_12080001	0.82	RAL-727
191	chr2R	12185330	12185407	accord	7381	1	22	77	'12-10	63.79	21.1	1.0	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_22_12185001	chr2R_12185001	0.55	RAL-727
192	chr2R	12322800	12322854	I-element	5343	2	17	54	'6-11	63.48	6.2	2.4	3` UTR	CG8841 -	chr2R_17_12320001	chr2R_12320001	0.35	RAL-727
193	chr2R	12336604	12336655	pogo	2100	1	8	51	'1-7	63.70	7.1	1.0	intergenic	CG34021 +,CG8490 +	chr2R_8_12335001	chr2R_12335001	0.12	RAL-727
194	chr2R	12369658	12369686	mdg1	7065	7076	6	28	'5-1	72.77	13.8	0.4	exon	CG33012 +	chr2R_6_12365001	chr2R_12365001	0.83	RAL-727
195	chr2R	12369671	12369689	I-element	5347	5329	7	18	'4-3	60.00	15.4	0.4	exon	CG33012 +	chr2R_7_12365001	chr2R_12365001	0.57	RAL-727
196	chr2R	12416864	12416934	pogo	2091	4	10	70	'4-6	63.94	6.8	1.3	exon	CG13157 +	chr2R_10_12415001	chr2R_12415001	0.40	RAL-727
197	chr2R	13148892	13148943	FB	14	9	21	51	'6-15	63.36	8.3	2.3	intron	Ack-like -	chr2R_21_13145001	chr2R_13145001	0.29	RAL-727
198	chr2R	13699428	13699491	hobo	2932	7	11	63	'4-7	58.62	6.1	1.5	intron	fas +	chr2R_11_13695001	chr2R_13695001	0.36	RAL-727
199	chr2R	13775117	13775197	roo	8664	408	28	80	'12-16	68.81	7.9	3.1	exon	Cpr50Ca +	chr2R_28_13775001	chr2R_13775001	0.43	RAL-727
200	chr2R	14004072	14004152	pogo	2099	2	15	80	'5-10	66.36	5.0	2.5	intron	mam +	chr2R_15_14000001	chr2R_14000001	0.33	RAL-727
201	chr2R	14638544	14638626	17.6	493	1	20	82	'11-9	65.85	4.4	3.7	5` UTR	CG43236 +	chr2R_20_14635001	chr2R_14635001	0.55	RAL-727
202	chr2R	14848979	14849017	flea	4710	4688	10	38	'6-4	64.81	17.2	0.5	exon	SMC2 -	chr2R_10_14845001	chr2R_14845001	0.60	RAL-727
203	chr2R	15105719	15105789	blood	7023	378	10	70	'4-6	54.80	7.6	1.2	intergenic	not near genes	chr2R_10_15105001	chr2R_15105001	0.40	RAL-727
204	chr2R	15304259	15304329	FB	3	4	24	70	'10-14	63.57	7.1	3.0	intron	Trpm -	chr2R_24_15300001	chr2R_15300001	0.42	RAL-727
205	chr2R	16385869	16385938	Quasimodo	5	3	16	69	'14-2	68.35	7.2	2.0	intergenic	CG43187 +	chr2R_16_16385001	chr2R_16385001	0.88	RAL-727
206	chr2R	16386476	16386548	P-element	1	2883	17	72	'5-12	47.78	7.3	2.0	intergenic	Sema-2b +	chr2R_17_16385001	chr2R_16385001	0.29	RAL-727
207	chr2R	16442708	16442778	hobo	2710	7	16	70	'4-12	65.62	5.0	2.7	intergenic	not near genes	chr2R_16_16440001	chr2R_16440001	0.25	RAL-727
208	chr2R	16731927	16731980	HMS-Beagle	245	16	4	53	'3-1	64.60	3.6	0.9	5` UTR	CG30463 -	chr2R_4_16730001	chr2R_16730001	0.75	RAL-727
209	chr2R	16736524	16736603	opus	113	495	23	79	'10-13	67.85	8.5	2.4	intergenic	CG43104 -	chr2R_23_16735001	chr2R_16735001	0.43	RAL-727
210	chr2R	16977859	16977935	hopper	1	3	17	76	'13-4	63.62	7.1	2.1	intron	Cbp53E +	chr2R_17_16975001	chr2R_16975001	0.76	RAL-727
211	chr2R	17263609	17263692	opus	7116	499	27	83	'16-11	67.42	7.6	3.1	intron	mbl +	chr2R_27_17260001	chr2R_17260001	0.59	RAL-727
212	chr2R	17268765	17268817	FB	7	1	16	52	'9-7	53.68	7.2	2.0	intron	mbl +	chr2R_16_17265001	chr2R_17265001	0.56	RAL-727
213	chr2R	17469280	17469540	pogo	12	2099	19	260	'9-10	67.95	1.9	6.6	intergenic	Tes -,qkr54B +	chr2R_19_17465001	chr2R_17465001	0.47	RAL-727
214	chr2R	17562491	17562568	mdg3	5253	5496	29	77	'16-13	68.48	8.5	3.1	exon	Klp54D +	chr2R_29_17560001	chr2R_17560001	0.55	RAL-727
215	chr2R	17734526	17734551	Stalker4	400	421	20	25	'11-9	61.89	38.1	0.5	3` UTR	CG6406 -	chr2R_20_17730001	chr2R_17730001	0.55	RAL-727
216	chr2R	18293227	18293308	Tirant	403	8107	15	81	'11-4	66.92	8.7	1.5	intron,intron	sbb -,CG14502 +	chr2R_15_18290001	chr2R_18290001	0.73	RAL-727
217	chr2R	18616685	18616744	copia	4889	254	7	59	'4-3	70.18	14.6	0.4	3` UTR	CG5327 +	chr2R_7_18615001	chr2R_18615001	0.57	RAL-727
218	chr2R	18652283	18652357	P-element	3	2886	32	74	'15-17	51.18	9.7	3.0	intron	SP2637 -	chr2R_32_18650001	chr2R_18650001	0.47	RAL-727
219	chr2R	18671667	18671737	412	1	7539	12	70	'8-4	62.97	6.3	1.6	intron	edl -	chr2R_12_18670001	chr2R_18670001	0.67	RAL-727
220	chr2R	18719270	18719350	mdg3	248	5255	16	80	'3-13	60.65	9.8	1.5	intron	Hs3st-A +	chr2R_16_18715001	chr2R_18715001	0.19	RAL-727
221	chr2R	18807870	18807891	BS	5062	5083	7	21	'3-4	69.14	4.1	1.4	intergenic	CG15096 -	chr2R_7_18805001	chr2R_18805001	0.43	RAL-727
222	chr2R	19857355	19857397	297	6967	29	4	42	'2-2	72.00	5.5	0.6	intergenic	not near genes	chr2R_4_19855001	chr2R_19855001	0.50	RAL-727
223	chr2R	19942604	19942628	pogo	2100	2095	6	24	'4-2	66.25	4.8	1.0	intergenic	not near genes	chr2R_6_19940001	chr2R_19940001	0.67	RAL-727
224	chr2R	20337420	20337474	roo	8682	400	20	54	'9-11	68.68	8.0	2.2	intergenic	not near genes	chr2R_20_20335001	chr2R_20335001	0.45	RAL-727
225	chr2R	20346253	20346336	blood	7010	378	28	83	'18-10	62.03	7.1	3.5	intergenic	CG13870 +	chr2R_28_20345001	chr2R_20345001	0.64	RAL-727
226	chr2R	20523556	20523582	I-element	5324	5350	6	26	'4-2	65.55	9.2	0.6	intergenic	not near genes	chr2R_6_20520001	chr2R_20520001	0.67	RAL-727
227	chr2R	20812933	20812962	jockey	4671	4700	12	29	'8-4	58.33	12.1	0.9	intergenic	not near genes	chr2R_12_20810001	chr2R_20810001	0.67	RAL-727
228	chr2R	20838649	20838733	mdg3	249	5251	33	84	'14-19	61.87	12.1	2.5	5` UTR	CR44667 +	chr2R_33_20835001	chr2R_20835001	0.42	RAL-727
229	chr2R	21158874	21159051	Juan	4213	4213	4	177	'2-2	74.34	4.4	0.7	intron	CG30389 -	chr2R_4_21155001	chr2R_21155001	0.50	RAL-727
230	chr2R	21362029	21362083	hopper	23	1411	13	54	'4-9	63.47	4.1	2.5	intron	cv-2 -	chr2R_13_21360001	chr2R_21360001	0.31	RAL-727
231	chr2R	21422976	21423052	roo	410	3	14	76	'13-1	66.92	0.2	11.7	intron	Sdc -	chr2R_14_21420001	chr2R_21420001	0.93	RAL-727
232	chr2R	21475391	21475452	P-element	3	2	20	61	'14-6	52.34	13.2	1.4	intron	Sdc -	chr2R_20_21475001	chr2R_21475001	0.70	RAL-727
233	chr2R	21835697	21835760	412	8	7536	12	63	'6-6	64.85	6.8	1.5	exon	CG4377 -	chr2R_12_21835001	chr2R_21835001	0.50	RAL-727
234	chr2R	22090643	22090663	Idefix	1	16	9	20	'5-4	64.06	13.6	0.6	exon	CG43393 -	chr2R_9_22090001	chr2R_22090001	0.56	RAL-727
235	chr2R	22613977	22614056	roo	408	8663	24	79	'14-10	65.90	6.3	3.3	intergenic	CG33143 +	chr2R_24_22610001	chr2R_22610001	0.58	RAL-727
236	chr2R	22778078	22778147	412	1	493	13	69	'1-12	62.09	5.1	2.1	intron	CG42260 -	chr2R_13_22775001	chr2R_22775001	0.08	RAL-727
237	chr2R	22791556	22791577	jockey	17	17	6	21	'5-1	55.41	11.2	0.5	intron	CG42260 -	chr2R_6_22790001	chr2R_22790001	0.83	RAL-727
238	chr2R	22798180	22798247	1360	3	3380	30	67	'15-15	65.10	7.7	3.4	5` UTR	CG42260 -	chr2R_30_22795001	chr2R_22795001	0.50	RAL-727
239	chr2R	23065600	23065686	blood	7007	378	12	86	'4-8	64.19	3.6	2.6	exon	PPO3 +	chr2R_12_23065001	chr2R_23065001	0.33	RAL-727
240	chr2R	23120045	23120117	copia	2	250	20	72	'9-11	61.34	6.0	2.9	intergenic	not near genes	chr2R_20_23120001	chr2R_23120001	0.45	RAL-727
241	chr2R	23157567	23157604	I-element	16	5332	8	37	'5-3	61.18	0.2	6.7	intron	CG9899 +	chr2R_8_23155001	chr2R_23155001	0.62	RAL-727
242	chr2R	24300560	24300624	hopper	8	6	14	64	'8-6	63.47	6.0	2.0	intergenic	not near genes	chr2R_14_24300001	chr2R_24300001	0.57	RAL-727
243	chr2R	24504427	24504507	opus	499	3	19	80	'11-8	68.19	8.7	2.0	intergenic	not near genes	chr2R_19_24500001	chr2R_24500001	0.58	RAL-727
244	chr2R	24664355	24664410	pogo	2094	11	14	55	'5-9	66.80	12.7	1.0	5` UTR	CG30161 -	chr2R_14_24660001	chr2R_24660001	0.36	RAL-727
245	chr2R	25074182	25074261	roo	8667	410	33	79	'22-11	65.06	6.6	4.3	intron	gol -	chr2R_33_25070001	chr2R_25070001	0.67	RAL-727
246	chr3L	27609	27626	INE-1	577	560	8	17	'5-3	56.42	9.0	0.8	intergenic	not near genes	chr3L_8_25001	chr3L_25001	0.62	RAL-727
247	chr3L	166580	166654	roo	403	1	23	74	'9-14	67.06	9.7	2.1	intron	p130CAS +	chr3L_23_165001	chr3L_165001	0.39	RAL-727
248	chr3L	742495	742577	Tirant	8110	401	22	82	'6-16	63.96	6.3	3.0	intron	hng3 -	chr3L_22_740001	chr3L_740001	0.27	RAL-727
249	chr3L	777561	777615	FB	8	7	21	54	'8-13	65.28	13.8	1.4	intergenic	not near genes	chr3L_21_775001	chr3L_775001	0.38	RAL-727
250	chr3L	901235	901313	297	6585	395	24	78	'11-13	68.92	7.4	2.9	intergenic	not near genes	chr3L_24_900001	chr3L_900001	0.46	RAL-727
251	chr3L	938473	938537	297	6602	3	10	64	'2-8	67.18	5.3	1.6	intron	Glut1 +	chr3L_10_935001	chr3L_935001	0.20	RAL-727
252	chr3L	1353489	1353561	Transpac	307	4923	21	72	'6-15	69.02	8.7	2.2	intron	Ptp61F -	chr3L_21_1350001	chr3L_1350001	0.29	RAL-727
253	chr3L	1586550	1586603	P-element	1	2575	17	53	'12-5	45.65	8.1	1.9	intron	CG13917 +	chr3L_17_1585001	chr3L_1585001	0.71	RAL-727
254	chr3L	1697741	1697780	springer	7138	376	8	39	'1-7	65.09	1.0	4.0	intron	CG7991 +	chr3L_8_1695001	chr3L_1695001	0.12	RAL-727
255	chr3L	1979591	1979674	diver	226	5887	37	83	'23-14	62.52	8.1	4.1	intergenic	not near genes	chr3L_37_1975001	chr3L_1975001	0.62	RAL-727
256	chr3L	2326439	2326465	jockey	4801	4776	7	26	'3-4	66.07	6.1	1.0	intron	MsR1 +	chr3L_7_2325001	chr3L_2325001	0.43	RAL-727
257	chr3L	3107948	3108012	Ivk	5369	5296	13	64	'4-9	64.12	5.5	2.0	intergenic	not near genes	chr3L_13_3105001	chr3L_3105001	0.31	RAL-727
258	chr3L	3540128	3540208	mdg3	247	5254	35	80	'12-23	61.33	10.8	3.0	intron	Eip63E +	chr3L_35_3540001	chr3L_3540001	0.34	RAL-727
259	chr3L	3778686	3778763	FB	1	3	10	77	'4-6	50.77	3.0	2.5	intron	CG32264 -	chr3L_10_3775001	chr3L_3775001	0.40	RAL-727
260	chr3L	4392312	4392375	I-element	5347	4886	8	63	'4-4	63.28	4.0	1.6	intron	slow +	chr3L_8_4390001	chr3L_4390001	0.50	RAL-727
261	chr3L	4712272	4712351	297	393	6581	9	79	'3-6	62.90	5.4	1.4	intron	RhoGEF64C +	chr3L_9_4710001	chr3L_4710001	0.33	RAL-727
262	chr3L	4784657	4784739	Burdock	255	6136	18	82	'9-9	64.80	5.7	2.7	intron	RhoGEF64C +	chr3L_18_4780001	chr3L_4780001	0.50	RAL-727
263	chr3L	5087795	5087818	jockey	5	28	8	23	'4-4	58.60	15.0	0.5	intergenic	not near genes	chr3L_8_5085001	chr3L_5085001	0.50	RAL-727
264	chr3L	5244287	5244361	hobo	2938	3	16	74	'2-14	67.07	5.4	2.5	intron	shep -	chr3L_16_5240001	chr3L_5240001	0.12	RAL-727
265	chr3L	5316143	5316235	flea	4758	256	24	92	'8-16	60.40	1.6	9.2	intergenic	CR45741 -	chr3L_24_5315001	chr3L_5315001	0.33	RAL-727
266	chr3L	5498336	5498423	Doc2-element	253	249	6	87	'2-4	58.85	6.7	0.8	exon	blanks -	chr3L_6_5495001	chr3L_5495001	0.33	RAL-727
267	chr3L	5557225	5557253	jockey	35	14	14	28	'8-6	63.07	10.0	1.3	intergenic	not near genes	chr3L_14_5555001	chr3L_5555001	0.57	RAL-727
268	chr3L	6001282	6001317	copia	4868	34	22	35	'11-11	64.35	9.3	2.1	intron	PVRAP +	chr3L_22_6000001	chr3L_6000001	0.50	RAL-727
269	chr3L	6025983	6026015	Doc	3	35	8	32	'3-5	66.74	8.7	0.8	3` UTR	PVRAP +	chr3L_8_6025001	chr3L_6025001	0.38	RAL-727
270	chr3L	6084801	6084862	Tirant	400	10	13	61	'11-2	61.86	7.7	1.5	intron	CG13293 +	chr3L_13_6080001	chr3L_6080001	0.85	RAL-727
271	chr3L	6543385	6543444	roo	9049	8662	21	59	'11-10	68.11	5.7	3.1	intron	sfl +	chr3L_21_6540001	chr3L_6540001	0.52	RAL-727
272	chr3L	6547004	6547026	X-element	12	35	8	22	'4-4	57.10	9.0	0.8	intron	sfl +	chr3L_8_6545001	chr3L_6545001	0.50	RAL-727
273	chr3L	7613200	7613219	297	6957	395	8	19	'5-3	70.95	5.7	1.2	intron	CG33275 +	chr3L_8_7610001	chr3L_7610001	0.62	RAL-727
274	chr3L	7752469	7752548	flea	4756	5011	17	79	'7-10	68.75	7.6	2.0	intron	CG32373 +	chr3L_17_7750001	chr3L_7750001	0.41	RAL-727
275	chr3L	8214517	8214565	pogo	21	2090	9	48	'5-4	70.26	4.4	1.7	intergenic	not near genes	chr3L_9_8210001	chr3L_8210001	0.56	RAL-727
276	chr3L	8654469	8654542	roo	8666	407	19	73	'11-8	61.92	5.3	3.0	intergenic	not near genes	chr3L_19_8650001	chr3L_8650001	0.58	RAL-727
277	chr3L	8766409	8766462	P-element	6	1	19	53	'9-10	47.34	14.0	1.3	intron	Fhos +	chr3L_19_8765001	chr3L_8765001	0.47	RAL-727
278	chr3L	8872827	8872908	copia	260	1	25	81	'10-15	63.59	3.6	5.4	intron	dally +	chr3L_25_8870001	chr3L_8870001	0.40	RAL-727
279	chr3L	8878670	8878743	copia	4869	249	27	73	'17-10	66.69	9.7	2.5	intron	dally +	chr3L_27_8875001	chr3L_8875001	0.63	RAL-727
280	chr3L	9532126	9532200	copia	249	4869	30	74	'16-14	68.56	9.3	2.9	intergenic	not near genes	chr3L_30_9530001	chr3L_9530001	0.53	RAL-727
281	chr3L	9907322	9907340	BS	5015	5004	11	18	'6-5	61.07	3.7	2.3	intergenic	not near genes	chr3L_11_9905001	chr3L_9905001	0.55	RAL-727
282	chr3L	10140094	10140166	copia	4870	253	16	72	'7-9	66.51	8.8	1.6	intergenic	not near genes	chr3L_16_10140001	chr3L_10140001	0.44	RAL-727
283	chr3L	10213199	10213263	mdg1	7039	405	14	64	'7-7	69.37	2.1	4.5	intergenic	not near genes	chr3L_14_10210001	chr3L_10210001	0.50	RAL-727
284	chr3L	10292712	10292814	mdg1	37	41	7	102	'2-5	75.81	5.3	1.1	intergenic	not near genes	chr3L_7_10290001	chr3L_10290001	0.29	RAL-727
285	chr3L	11140055	11140127	blood	10	379	20	72	'9-11	63.78	5.4	3.1	intron	CG32082 +	chr3L_20_11140001	chr3L_11140001	0.45	RAL-727
286	chr3L	11257353	11257398	1360	27	7	6	45	'2-4	63.46	6.4	0.8	intergenic	not near genes	chr3L_6_11255001	chr3L_11255001	0.33	RAL-727
287	chr3L	11257375	11257410	Tc3	238	237	5	35	'3-2	70.18	7.8	0.6	intergenic	not near genes	chr3L_5_11255001	chr3L_11255001	0.60	RAL-727
288	chr3L	11492384	11492470	Tirant	8108	402	27	86	'11-16	68.01	6.6	3.6	intron	chrb +	chr3L_27_11490001	chr3L_11490001	0.41	RAL-727
289	chr3L	11705259	11705324	FB	7	5	26	65	'14-12	61.85	10.6	2.2	intron	CG11658 -	chr3L_26_11705001	chr3L_11705001	0.54	RAL-727
290	chr3L	11711818	11711840	Doc	4242	4249	7	22	'2-5	49.45	0.0	7.0	intergenic	CG14132 -,crim -	chr3L_7_11710001	chr3L_11710001	0.29	RAL-727
291	chr3L	11839071	11839150	pogo	3	2099	11	79	'4-7	70.73	9.1	1.1	intergenic	not near genes	chr3L_11_11835001	chr3L_11835001	0.36	RAL-727
292	chr3L	11863922	11863953	Doc	31	2	19	31	'10-9	59.00	5.8	2.8	intron	CG44837 -	chr3L_19_11860001	chr3L_11860001	0.53	RAL-727
293	chr3L	12147815	12147892	412	494	5	33	77	'20-13	61.57	9.6	3.1	intron	Nrx-IV +	chr3L_33_12145001	chr3L_12145001	0.61	RAL-727
294	chr3L	12301197	12301265	hopper	11	2	20	68	'10-10	59.74	6.9	2.5	5` UTR	CR44550 +	chr3L_20_12300001	chr3L_12300001	0.50	RAL-727
295	chr3L	12721717	12721758	hopper	18	1393	9	41	'5-4	66.11	4.2	1.7	intergenic	not near genes	chr3L_9_12720001	chr3L_12720001	0.56	RAL-727
296	chr3L	12998861	12998922	Quasimodo	14	7366	10	61	'4-6	71.42	4.5	1.8	intergenic	not near genes	chr3L_10_12995001	chr3L_12995001	0.40	RAL-727
297	chr3L	13057875	13057960	Bari1	1706	451	17	85	'5-12	60.55	4.2	3.3	intergenic	not near genes	chr3L_17_13055001	chr3L_13055001	0.29	RAL-727
298	chr3L	13234858	13234875	Tc3	86	81	4	17	'1-3	72.00	6.8	0.5	intron	caps +	chr3L_4_13230001	chr3L_13230001	0.25	RAL-727
299	chr3L	13345500	13345531	copia	222	254	9	31	'4-5	67.32	4.7	1.6	intergenic	not near genes	chr3L_9_13345001	chr3L_13345001	0.44	RAL-727
300	chr3L	13407068	13407120	I-element	5342	8	11	52	'1-10	55.20	2.8	2.9	intergenic	not near genes	chr3L_11_13405001	chr3L_13405001	0.09	RAL-727
301	chr3L	13570007	13570028	hobo	26	4	9	21	'4-5	63.47	5.1	1.5	intron	bru-3 -	chr3L_9_13570001	chr3L_13570001	0.44	RAL-727
302	chr3L	13612596	13612628	copia	1	4902	13	32	'6-7	63.58	8.5	1.4	intron	bru-3 -	chr3L_13_13610001	chr3L_13610001	0.46	RAL-727
303	chr3L	13704758	13704836	Stalker	388	6846	26	78	'16-10	63.24	7.1	3.2	intron	bru-3 -	chr3L_26_13700001	chr3L_13700001	0.62	RAL-727
304	chr3L	13704783	13704829	Stalker4	7319	6967	9	46	'6-3	67.82	8.7	0.9	intron	bru-3 -	chr3L_9_13700001	chr3L_13700001	0.67	RAL-727
305	chr3L	13897406	13897474	copia	254	11	27	68	'10-17	65.02	9.7	2.5	intron	dysc -	chr3L_27_13895001	chr3L_13895001	0.37	RAL-727
306	chr3L	13901186	13901266	Burdock	6138	255	23	80	'5-18	62.33	6.4	3.1	intron	dysc -	chr3L_23_13900001	chr3L_13900001	0.22	RAL-727
307	chr3L	13983581	13983663	Burdock	6134	6389	21	82	'9-12	64.62	9.3	2.0	exon	CG17364 -	chr3L_21_13980001	chr3L_13980001	0.43	RAL-727
308	chr3L	14190822	14190880	P-element	17	2885	17	58	'6-11	44.66	5.7	2.5	intergenic	nuf +	chr3L_17_14190001	chr3L_14190001	0.35	RAL-727
309	chr3L	15099576	15099621	G4	3817	3804	9	45	'8-1	67.80	8.8	0.9	intron	CTPsyn +	chr3L_9_15095001	chr3L_15095001	0.89	RAL-727
310	chr3L	15415155	15415218	copia	250	4881	17	63	'13-4	67.30	6.5	2.3	intergenic	not near genes	chr3L_17_15415001	chr3L_15415001	0.76	RAL-727
311	chr3L	15516580	15516606	jockey	4985	4959	14	26	'6-8	62.82	10.4	1.2	3` UTR	CG13454 -	chr3L_14_15515001	chr3L_15515001	0.43	RAL-727
312	chr3L	15723916	15723942	jockey	4787	4761	8	26	'6-2	63.91	10.4	0.7	intron	comm -	chr3L_8_15720001	chr3L_15720001	0.75	RAL-727
313	chr3L	15855355	15855433	roo	406	8664	23	78	'9-14	65.95	10.8	1.9	intron	pHCl -	chr3L_23_15855001	chr3L_15855001	0.39	RAL-727
314	chr3L	16214892	16214966	blood	376	6	21	74	'14-7	62.38	6.6	2.8	intron	CG13073 -	chr3L_21_16210001	chr3L_16210001	0.67	RAL-727
315	chr3L	16416213	16416295	pogo	1	2100	22	82	'11-11	62.68	6.3	3.0	exon	CG4573 -	chr3L_22_16415001	chr3L_16415001	0.50	RAL-727
316	chr3L	16521401	16521487	HMS-Beagle2	6883	7199	17	86	'9-8	63.11	7.7	2.0	intron	CG43373 -	chr3L_17_16520001	chr3L_16520001	0.53	RAL-727
317	chr3L	16530295	16530376	roo	8664	409	18	81	'7-11	67.98	2.9	4.6	intron	CG43373 -	chr3L_18_16530001	chr3L_16530001	0.39	RAL-727
318	chr3L	17007050	17007127	roo	407	2	29	77	'10-19	64.06	6.9	3.7	intron	CG3764 -	chr3L_29_17005001	chr3L_17005001	0.34	RAL-727
319	chr3L	17710270	17710305	Doc	24	2	17	35	'8-9	66.28	9.3	1.7	intron	Ccn +	chr3L_17_17710001	chr3L_17710001	0.47	RAL-727
320	chr3L	17904182	17904248	FB	2	8	21	66	'10-11	63.60	9.3	2.0	intron	Prestin -	chr3L_21_17900001	chr3L_17900001	0.48	RAL-727
321	chr3L	17905613	17905679	Quasimodo	7354	2	19	66	'8-11	68.72	7.8	2.2	intron	Prestin -	chr3L_19_17905001	chr3L_17905001	0.42	RAL-727
322	chr3L	18082667	18082750	3S18	342	5764	23	83	'4-19	59.37	5.4	3.6	intron	CR43253 -	chr3L_23_18080001	chr3L_18080001	0.17	RAL-727
323	chr3L	18321347	18321418	412	490	7	20	71	'12-8	65.02	8.5	2.1	intergenic	not near genes	chr3L_20_18320001	chr3L_18320001	0.60	RAL-727
324	chr3L	18351687	18351769	roo	1	411	19	82	'13-6	64.19	6.0	2.7	intergenic	not near genes	chr3L_19_18350001	chr3L_18350001	0.68	RAL-727
325	chr3L	18597729	18597803	gtwin	6919	7385	16	74	'7-9	59.37	6.8	2.1	intergenic	CR45390 +	chr3L_16_18595001	chr3L_18595001	0.44	RAL-727
326	chr3L	18599879	18599941	hobo	1	2709	17	62	'13-4	65.39	8.1	1.9	intergenic	CG13380 -,CG4174 -	chr3L_17_18595001	chr3L_18595001	0.76	RAL-727
327	chr3L	18647276	18647550	FB	1	135	19	274	'12-7	58.48	1.9	6.6	intron	MYPT-75D +	chr3L_19_18645001	chr3L_18645001	0.63	RAL-727
328	chr3L	18706870	18706940	hobo	2933	2	19	70	'4-15	65.05	10.2	1.7	intergenic	not near genes	chr3L_19_18705001	chr3L_18705001	0.21	RAL-727
329	chr3L	18815331	18815391	pogo	2	2081	8	60	'5-3	62.26	4.3	1.5	intron	CG14073 -	chr3L_8_18815001	chr3L_18815001	0.62	RAL-727
330	chr3L	18839602	18839684	diver	5888	226	36	82	'20-16	63.54	14.0	2.4	intron	Indy -	chr3L_36_18835001	chr3L_18835001	0.56	RAL-727
331	chr3L	18843067	18843141	Juan	3942	4205	27	74	'17-10	62.00	25.7	1.0	intron	Indy -	chr3L_27_18840001	chr3L_18840001	0.63	RAL-727
332	chr3L	19115993	19116023	jockey	4669	4698	14	30	'7-7	64.06	13.3	1.0	intron	CG14082 -	chr3L_14_19115001	chr3L_19115001	0.50	RAL-727
333	chr3L	19250999	19251019	flea	235	255	11	20	'6-5	62.74	7.3	1.3	intergenic	not near genes	chr3L_11_19250001	chr3L_19250001	0.55	RAL-727
334	chr3L	19259850	19259926	transib2	4	2823	19	76	'7-12	64.47	6.1	2.7	intron	nes -	chr3L_19_19255001	chr3L_19255001	0.37	RAL-727
335	chr3L	19274805	19274879	transib2	5	2823	18	74	'10-8	64.34	6.6	2.4	intergenic	not near genes	chr3L_18_19270001	chr3L_19270001	0.56	RAL-727
336	chr3L	19339395	19339428	Tc1	29	1	12	33	'6-6	65.97	2.7	3.2	intergenic	not near genes	chr3L_12_19335001	chr3L_19335001	0.50	RAL-727
337	chr3L	19382286	19382360	mdg3	5253	247	33	74	'17-16	61.67	11.3	2.7	intron	CG32206 -	chr3L_33_19380001	chr3L_19380001	0.52	RAL-727
338	chr3L	19432911	19432991	micropia	5440	1	14	80	'4-10	66.94	8.7	1.4	intergenic	not near genes	chr3L_14_19430001	chr3L_19430001	0.29	RAL-727
339	chr3L	19946019	19946042	I-element	5324	5344	5	23	'1-4	56.76	11.7	0.4	intron	Ac76E +	chr3L_5_19945001	chr3L_19945001	0.20	RAL-727
340	chr3L	19951195	19951258	Ivk	1	5369	24	63	'13-11	63.02	7.8	2.7	intron	Ac76E +	chr3L_24_19950001	chr3L_19950001	0.54	RAL-727
341	chr3L	20065279	20065339	pogo	2100	3	12	60	'6-6	68.77	5.4	1.9	intron	sNPF-R -	chr3L_12_20065001	chr3L_20065001	0.50	RAL-727
342	chr3L	20072734	20072749	X-element	4598	4583	9	15	'4-5	52.27	4.7	1.6	intron	sNPF-R -	chr3L_9_20070001	chr3L_20070001	0.44	RAL-727
343	chr3L	20224145	20224225	Chimpo	186	1	19	80	'12-7	64.45	9.2	1.9	intron	CG17147 +	chr3L_19_20220001	chr3L_20220001	0.63	RAL-727
344	chr3L	21108663	21108696	diver	27	5887	24	33	'7-17	64.59	4.8	4.1	intron	ko -	chr3L_24_21105001	chr3L_21105001	0.29	RAL-727
345	chr3L	21234274	21234289	F-element	22	14	4	15	'3-1	60.39	8.3	0.4	intron	Eip78C +	chr3L_4_21230001	chr3L_21230001	0.75	RAL-727
346	chr3L	21363650	21363673	INE-1	138	142	6	23	'2-4	54.75	5.5	0.9	intergenic	not near genes	chr3L_6_21360001	chr3L_21360001	0.33	RAL-727
347	chr3L	22065741	22065757	X-element	23	23	7	16	'3-4	50.76	13.5	0.5	intergenic	CG14561 +,Oct-TyrR +	chr3L_7_22065001	chr3L_22065001	0.43	RAL-727
348	chr3L	22163937	22164017	roo	407	8663	24	80	'12-12	69.75	9.2	2.4	intron	olf413 +	chr3L_24_22160001	chr3L_22160001	0.50	RAL-727
349	chr3L	22194153	22194235	blood	7009	7388	22	82	'13-9	65.39	9.3	2.1	intron	olf413 +	chr3L_22_22190001	chr3L_22190001	0.59	RAL-727
350	chr3L	22497812	22497877	hobo	14	2709	9	65	'5-4	66.96	5.8	1.3	intergenic	CR45431 +	chr3L_9_22495001	chr3L_22495001	0.56	RAL-727
351	chr3L	22552222	22552297	mdg1	418	3	15	75	'10-5	63.90	6.0	2.1	intergenic	Trxr-2 +	chr3L_15_22550001	chr3L_22550001	0.67	RAL-727
352	chr3L	22554042	22554074	F-element	225	250	13	32	'6-7	59.76	5.5	2.0	intergenic	not near genes	chr3L_13_22550001	chr3L_22550001	0.46	RAL-727
353	chr3L	22744680	22744700	FB	25	15	6	20	'2-4	70.39	6.6	0.8	intron	CG7369 +	chr3L_6_22740001	chr3L_22740001	0.33	RAL-727
354	chr3L	22913142	22913226	roo	412	8664	40	84	'19-21	62.93	9.3	3.9	intron	CG12768 +	chr3L_40_22910001	chr3L_22910001	0.47	RAL-727
355	chr3L	22982209	22982237	jockey	4553	4581	16	28	'11-5	56.60	8.8	1.6	intergenic	not near genes	chr3L_16_22980001	chr3L_22980001	0.69	RAL-727
356	chr3L	23839694	23839709	McClintock	17	3	8	15	'3-5	60.54	3.6	1.7	intergenic	CG40470 -	chr3L_8_23835001	chr3L_23835001	0.38	RAL-727
357	chr3L	24120329	24120412	G5A	2440	2441	6	83	'2-4	72.32	9.2	0.6	intron	Snap25 +	chr3L_6_24120001	chr3L_24120001	0.33	RAL-727
358	chr3L	24231067	24231096	Doc	15	1	9	29	'5-4	60.22	5.2	1.5	intron	Snap25 +	chr3L_9_24230001	chr3L_24230001	0.56	RAL-727
359	chr3L	24272105	24272123	gypsy11	47	4041	9	18	'5-4	75.49	9.5	0.9	intron	Snap25 +	chr3L_9_24270001	chr3L_24270001	0.56	RAL-727
360	chr3L	24729580	24729604	pogo	2074	2098	5	24	'4-1	69.60	9.3	0.5	intron	scro +	chr3L_5_24725001	chr3L_24725001	0.80	RAL-727
361	chr3L	24940214	24940294	mdg1	38	7076	4	80	'2-2	74.00	3.1	1.0	intergenic	not near genes	chr3L_4_24940001	chr3L_24940001	0.50	RAL-727
362	chr3L	25162587	25162643	1360	3388	3380	5	56	'4-1	57.76	17.3	0.3	intergenic	not near genes	chr3L_5_25160001	chr3L_25160001	0.80	RAL-727
363	chr3L	25272542	25272559	1360	6	23	8	17	'2-6	61.67	12.4	0.6	intron	CG40467 -	chr3L_8_25270001	chr3L_25270001	0.25	RAL-727
364	chr3L	27174921	27174990	pogo	2088	6	21	69	'5-16	63.86	4.7	3.7	intergenic	not near genes	chr3L_21_27170001	chr3L_27170001	0.24	RAL-727
365	chr3R	1282784	1282817	F-element	9	25	13	33	'8-5	61.96	4.3	2.5	intergenic	not near genes	chr3R_13_1280001	chr3R_1280001	0.62	RAL-727
366	chr3R	1446822	1446897	1360	2	3388	34	75	'10-24	63.06	4.0	6.8	intron	CG40155 +	chr3R_34_1445001	chr3R_1445001	0.29	RAL-727
367	chr3R	1561451	1561533	copia	255	4867	17	82	'5-12	63.77	2.6	4.7	intergenic	not near genes	chr3R_17_1560001	chr3R_1560001	0.29	RAL-727
368	chr3R	3179358	3179375	S-element	1325	1335	6	17	'1-5	64.80	13.1	0.4	intron	CG42617 -	chr3R_6_3175001	chr3R_3175001	0.17	RAL-727
369	chr3R	4079992	4080062	roo	7	410	14	70	'5-9	69.51	4.7	2.5	intron	CG42402 +	chr3R_14_4075001	chr3R_4075001	0.36	RAL-727
370	chr3R	4553269	4553398	Juan	22	3	28	129	'10-18	61.64	4.9	4.7	intron	CG34357 -	chr3R_28_4550001	chr3R_4550001	0.36	RAL-727
371	chr3R	4554308	4554387	Bari1	1703	2	29	79	'14-15	66.55	7.9	3.3	intron	CG34357 -	chr3R_29_4550001	chr3R_4550001	0.48	RAL-727
372	chr3R	4565290	4565309	1360	3377	3376	7	19	'3-4	69.78	18.6	0.4	intergenic	not near genes	chr3R_7_4565001	chr3R_4565001	0.43	RAL-727
373	chr3R	4679461	4679491	hopper	1	1384	8	30	'4-4	66.33	9.9	0.7	intron	CG43427 +	chr3R_8_4675001	chr3R_4675001	0.50	RAL-727
374	chr3R	5130162	5130234	412	8	7545	16	72	'8-8	65.82	9.9	1.5	intergenic	CG12007 +	chr3R_16_5130001	chr3R_5130001	0.50	RAL-727
375	chr3R	5216408	5216491	Tirant	8108	400	28	83	'7-21	68.29	7.4	3.3	intron	cno -	chr3R_28_5215001	chr3R_5215001	0.25	RAL-727
376	chr3R	5245573	5245661	Tc3	317	238	7	88	'3-4	76.37	10.9	0.6	intron	CG12163 -	chr3R_7_5245001	chr3R_5245001	0.43	RAL-727
377	chr3R	5245581	5245652	1360	1	6	42	71	'22-20	64.34	12.0	3.2	intron	CG12163 -	chr3R_42_5245001	chr3R_5245001	0.52	RAL-727
378	chr3R	5327716	5327749	G2	2971	2961	9	33	'3-6	63.93	4.3	1.7	intron	mtd -	chr3R_9_5325001	chr3R_5325001	0.33	RAL-727
379	chr3R	5424495	5424591	roo	406	8640	9	96	'4-5	67.95	6.6	1.2	intron	CG14669 +	chr3R_9_5420001	chr3R_5420001	0.44	RAL-727
380	chr3R	5438286	5438361	hopper	1	1411	15	75	'9-6	64.92	6.6	2.0	intron	CG14669 +	chr3R_15_5435001	chr3R_5435001	0.60	RAL-727
381	chr3R	5493481	5493560	flea	4756	252	19	79	'8-11	71.58	7.8	2.2	exon	CG31547 -	chr3R_19_5490001	chr3R_5490001	0.42	RAL-727
382	chr3R	5671388	5671464	1360	1	3388	53	76	'30-23	65.58	12.0	4.1	intron	Atg17 +	chr3R_53_5670001	chr3R_5670001	0.57	RAL-727
383	chr3R	6088543	6088619	transib2	2	2821	14	76	'10-4	65.28	8.5	1.5	intergenic	Gasp -	chr3R_14_6085001	chr3R_6085001	0.71	RAL-727
384	chr3R	6141869	6141939	412	7	495	21	70	'10-11	63.69	3.7	4.5	intergenic	not near genes	chr3R_21_6140001	chr3R_6140001	0.48	RAL-727
385	chr3R	6816644	6816715	blood	10	378	13	71	'6-7	67.51	6.9	1.6	intergenic	CR42651 -	chr3R_13_6815001	chr3R_6815001	0.46	RAL-727
386	chr3R	7477449	7477481	BS	5023	4991	11	32	'7-4	62.15	4.1	2.2	intergenic	not near genes	chr3R_11_7475001	chr3R_7475001	0.64	RAL-727
387	chr3R	7591025	7591052	roo	379	406	10	27	'4-6	66.84	4.5	1.8	intron	CG34127 -	chr3R_10_7590001	chr3R_7590001	0.40	RAL-727
388	chr3R	7649801	7649866	Quasimodo	7351	1	4	65	'2-2	65.21	7.2	0.5	intergenic	not near genes	chr3R_4_7645001	chr3R_7645001	0.50	RAL-727
389	chr3R	7885606	7885636	jockey	4758	4788	12	30	'7-5	59.60	8.5	1.3	intron	CG17816 -	chr3R_12_7885001	chr3R_7885001	0.58	RAL-727
390	chr3R	8134897	8134914	297	375	6973	7	17	'4-3	68.76	11.2	0.6	intergenic	not near genes	chr3R_7_8130001	chr3R_8130001	0.57	RAL-727
391	chr3R	8347533	8347615	opus	1	499	27	82	'11-16	69.08	7.3	3.3	intergenic	CG7352 +,DppIII +	chr3R_27_8345001	chr3R_8345001	0.41	RAL-727
392	chr3R	8359958	8359982	F-element	35	13	6	24	'4-2	58.21	13.4	0.4	3` UTR,3` UTR	stck +,CG9684 -	chr3R_6_8355001	chr3R_8355001	0.67	RAL-727
393	chr3R	8478007	8478087	297	394	6583	17	80	'11-6	68.27	6.4	2.3	intergenic	CG45263 -	chr3R_17_8475001	chr3R_8475001	0.65	RAL-727
394	chr3R	9052438	9052510	P-element	4	1	18	72	'13-5	45.25	9.5	1.7	intergenic	Kdm2 +,Mst85C +	chr3R_18_9050001	chr3R_9050001	0.72	RAL-727
395	chr3R	9344782	9344857	P-element	2886	2885	24	75	'13-11	47.59	4.6	4.3	intron	CG45050 +	chr3R_24_9340001	chr3R_9340001	0.54	RAL-727
396	chr3R	9345635	9345705	FB	1	5	38	70	'21-17	65.16	10.3	3.4	intron	CG45050 +	chr3R_38_9345001	chr3R_9345001	0.55	RAL-727
397	chr3R	10087186	10087208	jockey	4989	4967	18	22	'7-11	54.54	16.3	1.0	intron	CR45054 +	chr3R_18_10085001	chr3R_10085001	0.39	RAL-727
398	chr3R	10206766	10206848	roo	408	8663	18	82	'3-15	63.89	7.1	2.2	intron,intron	Syn +,Timp -	chr3R_18_10205001	chr3R_10205001	0.17	RAL-727
399	chr3R	10460443	10460473	BS	5022	4992	9	30	'4-5	61.48	2.0	3.0	intergenic	not near genes	chr3R_9_10460001	chr3R_10460001	0.44	RAL-727
400	chr3R	11030218	11030295	roo	409	8663	16	77	'9-7	65.35	7.5	1.9	intron	CG34114 +	chr3R_16_11030001	chr3R_11030001	0.56	RAL-727
401	chr3R	11050985	11051063	Doc3-element	77	77	4	78	'2-2	66.52	6.7	0.5	intergenic	not near genes	chr3R_4_11050001	chr3R_11050001	0.50	RAL-727
402	chr3R	11142197	11142275	Max-element	8234	8533	24	78	'8-16	61.62	7.1	3.0	intergenic	not near genes	chr3R_24_11140001	chr3R_11140001	0.33	RAL-727
403	chr3R	11143440	11143470	I-element	32	2	12	30	'9-3	67.81	4.8	2.1	intergenic	not near genes	chr3R_12_11140001	chr3R_11140001	0.75	RAL-727
404	chr3R	11144152	11144189	Doc	1	16	8	37	'3-5	63.99	8.5	0.8	intergenic	CheA86a -	chr3R_8_11140001	chr3R_11140001	0.38	RAL-727
405	chr3R	11321014	11321058	hobo	6	2937	9	44	'8-1	61.89	2.5	2.6	intergenic	not near genes	chr3R_9_11320001	chr3R_11320001	0.89	RAL-727
406	chr3R	11457315	11457385	Quasimodo	7359	6	7	70	'3-4	66.27	3.4	1.6	intron,intron	CG17230 +,PGRP-LB -	chr3R_7_11455001	chr3R_11455001	0.43	RAL-727
407	chr3R	11534092	11534171	pogo	2100	4	16	79	'6-10	63.68	5.6	2.4	3` UTR	dpr4 -	chr3R_16_11530001	chr3R_11530001	0.38	RAL-727
408	chr3R	11553655	11553708	hopper	1413	25	11	53	'9-2	65.55	13.6	0.8	intergenic	CG14708 +	chr3R_11_11550001	chr3R_11550001	0.82	RAL-727
409	chr3R	11657109	11657181	copia	250	3	6	72	'5-1	61.73	11.4	0.5	intron	CG42327 +	chr3R_6_11655001	chr3R_11655001	0.83	RAL-727
410	chr3R	11773671	11773738	P-element	1	2882	32	67	'20-12	47.47	8.3	3.4	intron	l(3)neo38 -	chr3R_32_11770001	chr3R_11770001	0.62	RAL-727
411	chr3R	11913070	11913100	Juan	4	34	14	30	'6-8	59.59	27.2	0.5	intron	Cad87A -	chr3R_14_11910001	chr3R_11910001	0.43	RAL-727
412	chr3R	12539018	12539303	mdg1	7455	21	14	285	'13-1	62.45	5.4	2.2	intron	Octbeta3R -	chr3R_14_12535001	chr3R_12535001	0.93	RAL-727
413	chr3R	12557377	12557453	412	4	495	17	76	'10-7	62.42	4.8	2.9	intron	Octbeta2R -	chr3R_17_12555001	chr3R_12555001	0.59	RAL-727
414	chr3R	12576915	12576994	roo	8665	409	14	79	'5-9	65.50	8.1	1.5	intron	Octbeta2R -	chr3R_14_12575001	chr3R_12575001	0.36	RAL-727
415	chr3R	12853670	12853752	blood	379	7010	14	82	'8-6	64.44	12.0	1.1	intergenic	not near genes	chr3R_14_12850001	chr3R_12850001	0.57	RAL-727
416	chr3R	13180307	13180393	ZAM	456	7961	26	86	'13-13	64.17	5.9	3.8	intergenic	not near genes	chr3R_26_13180001	chr3R_13180001	0.50	RAL-727
417	chr3R	13770096	13770124	jockey	4792	4764	8	28	'3-5	65.11	11.2	0.7	intron	Cht5 +	chr3R_8_13770001	chr3R_13770001	0.38	RAL-727
418	chr3R	13988541	13988603	FB	11	1	19	62	'8-11	61.02	1.4	7.9	intron	rdx -	chr3R_19_13985001	chr3R_13985001	0.42	RAL-727
419	chr3R	14020305	14020384	pogo	2	2098	24	79	'9-15	66.41	7.1	3.0	intron	rdx -	chr3R_24_14020001	chr3R_14020001	0.38	RAL-727
420	chr3R	14051440	14051523	mdg3	247	5251	32	83	'10-22	65.35	8.5	3.4	intergenic	not near genes	chr3R_32_14050001	chr3R_14050001	0.31	RAL-727
421	chr3R	14096163	14096192	jockey	34	5	14	29	'9-5	57.98	10.7	1.2	intron	CCHa1 -	chr3R_14_14095001	chr3R_14095001	0.64	RAL-727
422	chr3R	14103589	14103668	mdg3	245	5253	19	79	'6-13	65.42	7.2	2.3	intergenic	PK1-R -	chr3R_19_14100001	chr3R_14100001	0.32	RAL-727
423	chr3R	14331142	14331171	Transpac	4924	4951	13	29	'8-5	74.07	1.2	5.9	intron	NK7.1 -	chr3R_13_14330001	chr3R_14330001	0.62	RAL-727
424	chr3R	14743169	14743199	FB	32	2	6	30	'3-3	67.34	4.2	1.2	intron	jvl +	chr3R_6_14740001	chr3R_14740001	0.50	RAL-727
425	chr3R	14970198	14970232	Doc	112	78	18	34	'9-9	62.51	6.1	2.5	intergenic	not near genes	chr3R_18_14970001	chr3R_14970001	0.50	RAL-727
426	chr3R	15047379	15047403	F-element	11	9	9	24	'4-5	60.00	3.8	1.9	intergenic	not near genes	chr3R_9_15045001	chr3R_15045001	0.44	RAL-727
427	chr3R	15574768	15574849	Transpac	4919	5228	38	81	'19-19	65.25	3.6	8.3	intergenic	not near genes	chr3R_38_15570001	chr3R_15570001	0.50	RAL-727
428	chr3R	15699160	15699188	Doc	327	299	11	28	'6-5	56.10	7.1	1.4	intergenic	not near genes	chr3R_11_15695001	chr3R_15695001	0.55	RAL-727
429	chr3R	15714337	15714363	jockey	4694	4673	13	26	'9-4	60.81	10.4	1.1	intergenic	not near genes	chr3R_13_15710001	chr3R_15710001	0.69	RAL-727
430	chr3R	16068372	16068399	jockey	32	5	5	27	'4-1	58.67	8.4	0.5	intergenic	Mhcl -	chr3R_5_16065001	chr3R_16065001	0.80	RAL-727
431	chr3R	16556885	16556956	pogo	2092	4	12	71	'4-8	62.81	7.7	1.4	intron	CG42342 +	chr3R_12_16555001	chr3R_16555001	0.33	RAL-727
432	chr3R	16899088	16899154	P-element	4	2882	12	66	'3-9	49.28	9.6	1.1	intron	iab-8 -	chr3R_12_16895001	chr3R_16895001	0.25	RAL-727
433	chr3R	17414441	17414518	Stalker2	7245	7644	24	77	'17-7	61.21	5.2	3.9	3` UTR	CG42822 +	chr3R_24_17410001	chr3R_17410001	0.71	RAL-727
434	chr3R	17471191	17471275	3S18	5764	344	30	84	'20-10	61.83	8.4	3.2	intergenic	not near genes	chr3R_30_17470001	chr3R_17470001	0.67	RAL-727
435	chr3R	17709285	17709337	copia	4881	239	5	52	'3-2	68.00	13.6	0.3	intron	osa -	chr3R_5_17705001	chr3R_17705001	0.60	RAL-727
436	chr3R	17733261	17733354	INE-1	559	557	12	93	'10-2	68.61	3.6	2.6	intergenic	Lgr1 +,CG14321 +	chr3R_12_17730001	chr3R_17730001	0.83	RAL-727
437	chr3R	17992038	17992119	McClintock	480	5952	16	81	'3-13	65.42	12.5	1.2	intron	cpo +	chr3R_16_17990001	chr3R_17990001	0.19	RAL-727
438	chr3R	18000467	18000544	412	7546	3	16	77	'9-7	66.30	7.8	1.8	intron	cpo +	chr3R_16_18000001	chr3R_18000001	0.56	RAL-727
439	chr3R	18008240	18008271	Doc	4	13	10	31	'4-6	64.71	2.5	2.9	intron	cpo +	chr3R_10_18005001	chr3R_18005001	0.40	RAL-727
440	chr3R	18157042	18157066	S-element	1691	1715	13	24	'7-6	65.84	7.7	1.5	intergenic	not near genes	chr3R_13_18155001	chr3R_18155001	0.54	RAL-727
441	chr3R	18203210	18203246	hopper	21	1390	6	36	'5-1	62.58	2.5	1.7	intron	CG7985 +	chr3R_6_18200001	chr3R_18200001	0.83	RAL-727
442	chr3R	18590447	18590520	mdg1	8	7459	12	73	'6-6	64.20	4.2	2.3	intron	CG7694 +	chr3R_12_18590001	chr3R_18590001	0.50	RAL-727
443	chr3R	18901244	18901315	blood	371	4	26	71	'8-18	59.33	5.3	4.1	intergenic	Rh2 +,CG14294 -	chr3R_26_18900001	chr3R_18900001	0.31	RAL-727
444	chr3R	19322154	19322181	P-element	2883	2876	10	27	'4-6	49.79	8.7	1.0	intron	Dl -	chr3R_10_19320001	chr3R_19320001	0.40	RAL-727
445	chr3R	19493476	19493534	I-element	5344	1	17	58	'3-14	60.09	7.4	2.0	intron	Dys +	chr3R_17_19490001	chr3R_19490001	0.18	RAL-727
446	chr3R	19527562	19527589	hobo	3	30	10	27	'5-5	62.99	4.5	1.8	intron	Dys +	chr3R_10_19525001	chr3R_19525001	0.50	RAL-727
447	chr3R	19541300	19541350	hobo	2922	5	9	50	'2-7	59.47	4.5	1.6	intron	Dys +	chr3R_9_19540001	chr3R_19540001	0.22	RAL-727
448	chr3R	19675244	19675317	Stalker4	401	6952	13	73	'5-8	63.62	9.8	1.2	intron	Naam +	chr3R_13_19675001	chr3R_19675001	0.38	RAL-727
449	chr3R	19675284	19675311	Stalker	6879	3	7	27	'4-3	63.23	9.3	0.7	intron	Naam +	chr3R_7_19675001	chr3R_19675001	0.57	RAL-727
450	chr3R	20088542	20088610	roo	8667	400	25	68	'13-12	65.54	7.4	3.0	intergenic	not near genes	chr3R_25_20085001	chr3R_20085001	0.52	RAL-727
451	chr3R	20215194	20215277	opus	111	7500	18	83	'8-10	65.54	6.8	2.3	intron	Nlg4 +	chr3R_18_20215001	chr3R_20215001	0.44	RAL-727
452	chr3R	20666273	20666350	412	1	491	19	77	'9-10	62.97	10.2	1.7	intergenic	not near genes	chr3R_19_20665001	chr3R_20665001	0.47	RAL-727
453	chr3R	20729015	20729089	mdg1	7457	7038	18	74	'11-7	62.50	8.0	2.0	intergenic	not near genes	chr3R_18_20725001	chr3R_20725001	0.61	RAL-727
454	chr3R	20740302	20740361	1360	3382	13	17	59	'8-9	66.85	8.2	1.8	5` UTR	CG42322 +	chr3R_17_20740001	chr3R_20740001	0.47	RAL-727
455	chr3R	21047221	21047240	I-element	5350	5331	8	19	'4-4	60.50	1.1	3.8	intergenic	CG31207 -,CG7079 -	chr3R_8_21045001	chr3R_21045001	0.50	RAL-727
456	chr3R	21059310	21059390	pogo	2098	3	36	80	'16-20	67.52	12.2	2.7	intron	Mvl -	chr3R_36_21055001	chr3R_21055001	0.44	RAL-727
457	chr3R	21214067	21214106	blood	31	7378	5	39	'2-3	65.11	9.7	0.5	intergenic	not near genes	chr3R_5_21210001	chr3R_21210001	0.40	RAL-727
458	chr3R	21257794	21257824	jockey	8	15	11	30	'7-4	60.20	10.8	0.9	intron	ETHR +	chr3R_11_21255001	chr3R_21255001	0.64	RAL-727
459	chr3R	21296457	21296533	P-element	2886	2886	43	76	'17-26	54.20	16.5	2.5	intergenic	Hsromega +	chr3R_43_21295001	chr3R_21295001	0.40	RAL-727
460	chr3R	21441231	21441256	Doc	4	29	8	25	'3-5	62.45	5.6	1.2	intergenic	lbe -	chr3R_8_21440001	chr3R_21440001	0.38	RAL-727
461	chr3R	21582253	21582334	S-element	1	2	15	81	'9-6	66.09	5.0	2.5	intron	InR -	chr3R_15_21580001	chr3R_21580001	0.60	RAL-727
462	chr3R	21633659	21633776	P-element	2884	2	13	117	'8-5	50.07	3.2	3.1	intron	E2f -	chr3R_13_21630001	chr3R_21630001	0.62	RAL-727
463	chr3R	21799274	21799354	copia	4868	254	28	80	'16-12	67.88	8.2	3.0	intron	CASK -	chr3R_28_21795001	chr3R_21795001	0.57	RAL-727
464	chr3R	22339839	22339861	hobo	1	23	13	22	'8-5	61.02	12.0	1.0	intron	CG5388 -	chr3R_13_22335001	chr3R_22335001	0.62	RAL-727
465	chr3R	22668462	22668508	FB	22	5	14	46	'7-7	66.69	10.7	1.2	intron	wake +	chr3R_14_22665001	chr3R_22665001	0.50	RAL-727
466	chr3R	22836381	22836459	Max-element	298	8234	9	78	'2-7	60.96	6.7	1.2	intergenic	not near genes	chr3R_9_22835001	chr3R_22835001	0.22	RAL-727
467	chr3R	24280230	24280311	297	395	6583	27	81	'12-15	67.57	8.1	3.0	exon	CG13611 +	chr3R_27_24280001	chr3R_24280001	0.44	RAL-727
468	chr3R	24298454	24298479	F-element	13	11	7	25	'3-4	52.76	22.8	0.3	intron	crb +	chr3R_7_24295001	chr3R_24295001	0.43	RAL-727
469	chr3R	24395346	24395366	F-element	68	93	9	20	'7-2	57.13	10.8	0.8	3` UTR	nAChRalpha1 -	chr3R_9_24395001	chr3R_24395001	0.78	RAL-727
470	chr3R	24493552	24493580	jockey	58	86	11	28	'4-7	55.28	7.4	1.3	intergenic	not near genes	chr3R_11_24490001	chr3R_24490001	0.36	RAL-727
471	chr3R	25293020	25293101	297	6582	395	9	81	'7-2	65.86	9.8	0.8	intergenic	CG31098 -,CG31102 -	chr3R_9_25290001	chr3R_25290001	0.78	RAL-727
472	chr3R	25316251	25316283	297	395	365	14	32	'8-6	66.81	3.0	3.5	intergenic	CG10559 -,CG10553 -	chr3R_14_25315001	chr3R_25315001	0.57	RAL-727
473	chr3R	25424096	25424178	copia	257	4869	17	82	'13-4	68.19	5.6	2.6	intron	Fur1 -	chr3R_17_25420001	chr3R_25420001	0.76	RAL-727
474	chr3R	25433834	25433913	copia	2	256	22	79	'8-14	64.66	9.1	2.2	intron	Fur1 -	chr3R_22_25430001	chr3R_25430001	0.36	RAL-727
475	chr3R	25698456	25698513	jockey	4986	11	29	57	'12-17	59.70	11.2	2.4	intergenic	LpR2 -	chr3R_29_25695001	chr3R_25695001	0.41	RAL-727
476	chr3R	25821781	25821854	pogo	4	2099	18	73	'11-7	64.17	7.8	2.0	intergenic	not near genes	chr3R_18_25820001	chr3R_25820001	0.61	RAL-727
477	chr3R	25926576	25926656	Transpac	5228	4919	25	80	'9-16	61.59	9.0	2.5	intron	CCAP-R -	chr3R_25_25925001	chr3R_25925001	0.36	RAL-727
478	chr3R	25996603	25996687	copia	5116	5117	4	84	'3-1	56.33	0.1	3.6	intron	CG43116 -	chr3R_4_25995001	chr3R_25995001	0.75	RAL-727
479	chr3R	26312269	26312486	297	6974	55	21	217	'20-1	67.36	6.8	2.7	intergenic	not near genes	chr3R_21_26310001	chr3R_26310001	0.95	RAL-727
480	chr3R	26544233	26544308	FB	1	1	20	75	'12-8	66.13	9.2	2.0	intron	scrib +	chr3R_20_26540001	chr3R_26540001	0.60	RAL-727
481	chr3R	26827608	26827678	Tabor	2	7322	26	70	'14-12	63.58	9.5	2.5	intron	Tl +	chr3R_26_26825001	chr3R_26825001	0.54	RAL-727
482	chr3R	26856928	26856998	roo	412	8673	21	70	'8-13	69.04	6.0	3.0	intron	Lerp -	chr3R_21_26855001	chr3R_26855001	0.38	RAL-727
483	chr3R	27441583	27441664	Stalker2	403	7248	39	81	'24-15	60.75	10.0	3.5	intergenic	not near genes	chr3R_39_27440001	chr3R_27440001	0.62	RAL-727
484	chr3R	27835703	27835732	hobo	29	1	9	29	'5-4	60.63	7.2	1.1	intron	CG34353 -	chr3R_9_27835001	chr3R_27835001	0.56	RAL-727
485	chr3R	27948272	27948293	Juan	4185	4206	7	21	'4-3	62.29	4.1	1.4	intergenic	mfrn -,Gp93 +	chr3R_7_27945001	chr3R_27945001	0.57	RAL-727
486	chr3R	27974677	27974710	jockey	4672	4705	13	33	'5-8	69.42	6.2	1.8	intron	betaTub97EF -	chr3R_13_27970001	chr3R_27970001	0.38	RAL-727
487	chr3R	28240381	28240445	hopper	1401	1412	17	64	'12-5	62.85	6.9	2.2	3` UTR	CG34354 +	chr3R_17_28240001	chr3R_28240001	0.71	RAL-727
488	chr3R	28512785	28512854	Tc3	315	312	6	69	'5-1	70.22	9.1	0.6	intron	Dhc98D +	chr3R_6_28510001	chr3R_28510001	0.83	RAL-727
489	chr3R	28625262	28625334	blood	378	7017	37	72	'23-14	60.53	10.7	3.2	intron	CG10011 -	chr3R_37_28625001	chr3R_28625001	0.62	RAL-727
490	chr3R	28752858	28752889	jockey	29	6	8	31	'3-5	62.16	5.6	1.2	intergenic	not near genes	chr3R_8_28750001	chr3R_28750001	0.38	RAL-727
491	chr3R	29330128	29330201	roo	8673	411	22	73	'14-8	66.34	6.7	2.9	intergenic	not near genes	chr3R_22_29330001	chr3R_29330001	0.64	RAL-727
492	chr3R	29411609	29411670	I-element	5346	1	23	61	'8-15	62.81	3.9	4.7	intron	Ptp99A +	chr3R_23_29410001	chr3R_29410001	0.35	RAL-727
493	chr3R	29702262	29702287	I-element	6	28	9	25	'3-6	61.27	0.6	5.6	intergenic	not near genes	chr3R_9_29700001	chr3R_29700001	0.33	RAL-727
494	chr3R	29999652	29999728	297	6581	390	21	76	'12-9	69.81	7.1	2.6	3` UTR	CG11504 +	chr3R_21_29995001	chr3R_29995001	0.57	RAL-727
495	chr3R	30347274	30347351	roo	9069	8664	27	77	'16-11	68.53	6.8	3.5	intron	hdc +	chr3R_27_30345001	chr3R_30345001	0.59	RAL-727
496	chr3R	30626323	30626404	412	494	1	34	81	'16-18	62.59	5.9	4.9	intergenic	not near genes	chr3R_34_30625001	chr3R_30625001	0.47	RAL-727
497	chr3R	30695639	30695661	F-element	26	22	6	22	'4-2	62.10	7.3	0.7	3` UTR	Pka-C2 -	chr3R_6_30695001	chr3R_30695001	0.67	RAL-727
498	chr3R	31163334	31163395	roo	3	392	11	61	'7-4	66.46	7.3	1.3	intron,intron	Gycbeta100B +,stops -	chr3R_11_31160001	chr3R_31160001	0.64	RAL-727
499	chr3R	31457936	31457967	jockey	4	34	17	31	'8-9	61.91	13.9	1.1	intergenic	Gprk2 +,lox -	chr3R_17_31455001	chr3R_31455001	0.47	RAL-727
500	chr3R	31963001	31963061	hobo	14	2936	11	60	'6-5	60.99	5.6	1.7	intron	heph -	chr3R_11_31960001	chr3R_31960001	0.55	RAL-727
501	chr4	1038454	1038517	pogo	2090	10	6	63	'2-4	60.97	5.6	0.9	exon	CaMKII -	chr4_6_1035001	chr4_1035001	0.33	RAL-727
502	chr4	1230638	1230711	P-element	2883	1	25	73	'11-14	48.49	10.3	2.2	5` UTR	Dyrk3 -	chr4_25_1230001	chr4_1230001	0.44	RAL-727
503	chrX	281048	281065	Doc	15	10	14	17	'9-5	60.83	7.9	1.6	intron	CG3777 +	chrX_14_280001	chrX_280001	0.64	RAL-727
504	chrX	674918	674994	copia	5	256	20	76	'9-11	65.96	6.8	2.6	intergenic	not near genes	chrX_20_670001	chrX_670001	0.45	RAL-727
505	chrX	913082	913210	roo	411	8682	29	128	'21-8	68.63	9.1	2.9	intron	CG43867 -	chrX_29_910001	chrX_910001	0.72	RAL-727
506	chrX	2318955	2318971	Transpac	4936	1	9	16	'6-3	53.23	4.2	1.7	intron	phl +	chrX_9_2315001	chrX_2315001	0.67	RAL-727
507	chrX	2781220	2781291	FB	1	5	19	71	'10-9	64.37	4.3	3.6	intron	kirre +	chrX_19_2780001	chrX_2780001	0.53	RAL-727
508	chrX	2895194	2895270	roo	402	8661	22	76	'8-14	66.30	4.4	4.1	intron	kirre +	chrX_22_2895001	chrX_2895001	0.36	RAL-727
509	chrX	3244613	3244628	Gypsy6A_LTR	373	388	6	15	'3-3	64.83	5.5	0.9	intron	dnc +	chrX_6_3240001	chrX_3240001	0.50	RAL-727
510	chrX	3394139	3394209	1360	3386	6	31	70	'21-10	66.40	5.8	4.6	intron,intron	CR44999 +,CG12535 -	chrX_31_3390001	chrX_3390001	0.68	RAL-727
511	chrX	3563022	3563077	opus	7	497	15	55	'2-13	67.45	6.5	2.0	intron,intron	CG32791 -,ppk8 +	chrX_15_3560001	chrX_3560001	0.13	RAL-727
512	chrX	3673504	3673581	S-element	1713	1712	14	77	'7-7	69.10	3.8	2.9	intron	Mnt +	chrX_14_3670001	chrX_3670001	0.50	RAL-727
513	chrX	3736517	3736554	Tirant	8474	404	7	37	'5-2	68.78	4.0	1.4	intron	tlk +	chrX_7_3735001	chrX_3735001	0.71	RAL-727
514	chrX	3985518	3985546	Transpac	4918	27	10	28	'8-2	66.89	7.6	1.2	intergenic	not near genes	chrX_10_3985001	chrX_3985001	0.80	RAL-727
515	chrX	4267274	4267300	297	6962	395	9	26	'5-4	71.99	9.2	0.9	intergenic	not near genes	chrX_9_4265001	chrX_4265001	0.56	RAL-727
516	chrX	4459549	4459623	copia	4869	259	14	74	'2-12	68.98	5.4	2.2	intron,intron	CR32773 -,bi +	chrX_14_4455001	chrX_4455001	0.14	RAL-727
517	chrX	4717144	4717160	jockey	4683	4678	8	16	'3-5	53.62	6.2	1.1	intron	Proc-R +	chrX_8_4715001	chrX_4715001	0.38	RAL-727
518	chrX	4807722	4807748	mdg1	395	7459	12	26	'7-5	61.37	11.0	1.0	intergenic	not near genes	chrX_12_4805001	chrX_4805001	0.58	RAL-727
519	chrX	5037894	5037967	roo	9071	11	25	73	'10-15	66.84	5.9	3.6	intron	CR44833 -	chrX_25_5035001	chrX_5035001	0.40	RAL-727
520	chrX	5645689	5645765	diver	5888	220	32	76	'19-13	64.98	9.5	3.0	intron	CG42492 -	chrX_32_5645001	chrX_5645001	0.59	RAL-727
521	chrX	5859359	5859398	BS	43	4	6	39	'3-3	68.18	7.7	0.7	intergenic	not near genes	chrX_6_5855001	chrX_5855001	0.50	RAL-727
522	chrX	5951565	5951644	roo	408	1	28	79	'16-12	68.09	5.9	4.1	3` UTR	CG32755 +	chrX_28_5950001	chrX_5950001	0.57	RAL-727
523	chrX	6317690	6317767	hopper	2	2	10	77	'9-1	61.41	6.1	1.4	intron	CG15894 +	chrX_10_6315001	chrX_6315001	0.90	RAL-727
524	chrX	6410268	6410339	hobo	2933	1	16	71	'4-12	65.85	5.1	2.6	intergenic	not near genes	chrX_16_6410001	chrX_6410001	0.25	RAL-727
525	chrX	6507610	6507646	X-element	4688	11	6	36	'2-4	63.23	5.3	1.0	intron	CG42340 -	chrX_6_6505001	chrX_6505001	0.33	RAL-727
526	chrX	6755734	6755756	transib4	156	177	8	22	'3-5	77.62	13.0	0.6	3` UTR	CG14439 +	chrX_8_6755001	chrX_6755001	0.38	RAL-727
527	chrX	7270390	7270466	roo	8669	410	20	76	'4-16	66.28	5.3	3.2	intron	CR44357 -	chrX_20_7270001	chrX_7270001	0.20	RAL-727
528	chrX	7471473	7471556	roo	8913	407	20	83	'10-10	65.11	5.8	2.9	intergenic	not near genes	chrX_20_7470001	chrX_7470001	0.50	RAL-727
529	chrX	7782634	7782667	Doc	5	2	8	33	'1-7	63.66	7.0	1.0	intergenic	not near genes	chrX_8_7780001	chrX_7780001	0.12	RAL-727
530	chrX	7912964	7913042	S-element	1714	4	10	78	'6-4	67.88	5.8	1.5	exon	snz +	chrX_10_7910001	chrX_7910001	0.60	RAL-727
531	chrX	8004285	8004360	mdg1	420	5	21	75	'14-7	67.91	5.8	3.1	intron	Tbh +	chrX_21_8000001	chrX_8000001	0.67	RAL-727
532	chrX	8027452	8027498	Juan	4191	1	10	46	'5-5	59.37	5.2	1.6	intergenic	Tbh +	chrX_10_8025001	chrX_8025001	0.50	RAL-727
533	chrX	8038769	8038791	297	23	6582	5	22	'1-4	66.40	6.0	0.7	3` UTR	fs(1)h -	chrX_5_8035001	chrX_8035001	0.20	RAL-727
534	chrX	8364678	8364703	jockey	10	33	13	25	'3-10	59.78	12.8	0.9	intron	nAChRalpha3 -	chrX_13_8360001	chrX_8360001	0.23	RAL-727
535	chrX	8544725	8544800	roo	409	8666	12	75	'3-9	54.39	3.2	2.9	intron	Nrg +	chrX_12_8540001	chrX_8540001	0.25	RAL-727
536	chrX	8920755	8920776	opus	495	474	13	21	'5-8	64.50	11.2	1.1	intron	rdgA +	chrX_13_8920001	chrX_8920001	0.38	RAL-727
537	chrX	9428351	9428396	hobo	2910	3	6	45	'3-3	64.72	4.0	1.2	intron	mgl -	chrX_6_9425001	chrX_9425001	0.50	RAL-727
538	chrX	9434926	9434944	297	6956	393	5	18	'4-1	69.60	5.5	0.8	intron	mgl -	chrX_5_9430001	chrX_9430001	0.80	RAL-727
539	chrX	9949516	9949580	jockey	10	4989	16	64	'9-7	60.27	6.2	2.2	intergenic	not near genes	chrX_16_9945001	chrX_9945001	0.56	RAL-727
540	chrX	10217555	10217635	297	392	6581	18	80	'6-12	68.61	5.5	2.8	intergenic	l(1)G0230 +,CG15308 -,CR45629 +	chrX_18_10215001	chrX_10215001	0.33	RAL-727
541	chrX	10776082	10776197	17.6	294	4	27	115	'11-16	68.61	7.7	3.1	intron	CG15211 +	chrX_27_10775001	chrX_10775001	0.41	RAL-727
542	chrX	10903199	10903216	HMS-Beagle	226	241	10	17	'7-3	66.86	4.9	1.7	intergenic	not near genes	chrX_10_10900001	chrX_10900001	0.70	RAL-727
543	chrX	11029184	11029253	roo	13	410	28	69	'13-15	65.84	3.7	6.0	intron	CG42339 -	chrX_28_11025001	chrX_11025001	0.46	RAL-727
544	chrX	11221699	11221756	pogo	9	2083	16	57	'7-9	66.05	4.1	3.1	intergenic	not near genes	chrX_16_11220001	chrX_11220001	0.44	RAL-727
545	chrX	11451991	11452063	S-element	1708	1714	8	72	'5-3	64.29	5.4	1.2	intron	Evi5 -	chrX_8_11450001	chrX_11450001	0.62	RAL-727
546	chrX	11516818	11516900	roo	8664	412	20	82	'11-9	65.18	9.0	2.0	intron	Drak +	chrX_20_11515001	chrX_11515001	0.55	RAL-727
547	chrX	11858338	11858400	1360	7	3379	33	62	'10-23	64.22	4.6	5.9	intron	ATP7 +	chrX_33_11855001	chrX_11855001	0.30	RAL-727
548	chrX	12132397	12132469	hobo	4	2937	10	72	'7-3	64.76	4.6	1.8	intron	Ten-a +	chrX_10_12130001	chrX_12130001	0.70	RAL-727
549	chrX	12785009	12785057	hopper	1392	1412	12	48	'5-7	65.91	3.6	2.6	intergenic	CG32647 -	chrX_12_12785001	chrX_12785001	0.42	RAL-727
550	chrX	12825312	12825355	hobo	2912	7	15	43	'4-11	67.06	5.2	2.4	intron	Pde9 -	chrX_15_12825001	chrX_12825001	0.27	RAL-727
551	chrX	13053265	13053283	hopper2	1499	1476	7	18	'4-3	67.36	1.5	2.8	intron,3` UTR	rad +,CG12715 -	chrX_7_13050001	chrX_13050001	0.57	RAL-727
552	chrX	13059631	13059705	hopper	2	5	30	74	'24-6	67.84	11.1	2.5	intron	rad +	chrX_30_13055001	chrX_13055001	0.80	RAL-727
553	chrX	13346749	13346832	blood	7009	380	22	83	'9-13	63.59	5.8	3.2	intergenic	not near genes	chrX_22_13345001	chrX_13345001	0.41	RAL-727
554	chrX	13682413	13682621	copia	1	5064	15	208	'14-1	68.47	3.6	3.3	intergenic	not near genes	chrX_15_13680001	chrX_13680001	0.93	RAL-727
555	chrX	13800942	13801008	roo	9054	8662	14	66	'8-6	68.00	3.0	3.5	intron	inaE +	chrX_14_13800001	chrX_13800001	0.57	RAL-727
556	chrX	13833586	13833657	S-element	1708	5	12	71	'6-6	65.84	5.4	1.9	3` UTR	AMPdeam -	chrX_12_13830001	chrX_13830001	0.50	RAL-727
557	chrX	14392842	14392866	Transpac	286	310	7	24	'4-3	63.96	7.3	0.8	intron	dpr8 +	chrX_7_14390001	chrX_14390001	0.57	RAL-727
558	chrX	14567543	14567566	Doc	11	8	6	23	'4-2	60.00	5.2	1.0	intergenic	not near genes	chrX_6_14565001	chrX_14565001	0.67	RAL-727
559	chrX	14759781	14759809	jockey	4790	4762	7	28	'4-3	70.02	5.0	1.2	intron	CG15890 -	chrX_7_14755001	chrX_14755001	0.57	RAL-727
560	chrX	14965187	14965242	FB	21	1	13	55	'4-9	64.08	3.1	3.2	intron	eag +	chrX_13_14965001	chrX_14965001	0.31	RAL-727
561	chrX	15302357	15302434	S-element	6	1715	17	77	'7-10	61.86	3.6	3.7	intron	gce +	chrX_17_15300001	chrX_15300001	0.41	RAL-727
562	chrX	15376150	15376204	Ivk	12	5369	14	54	'9-5	67.46	2.7	3.8	intron	acj6 -	chrX_14_15375001	chrX_15375001	0.64	RAL-727
563	chrX	15841154	15841177	INE-1	141	164	8	23	'5-3	61.60	13.0	0.6	3` UTR	CG8565 +	chrX_8_15840001	chrX_15840001	0.62	RAL-727
564	chrX	15903310	15903348	INE-1	549	151	7	38	'1-6	66.23	3.9	1.4	intron	shi +	chrX_7_15900001	chrX_15900001	0.14	RAL-727
565	chrX	16091477	16091535	P-element	2	2875	22	58	'14-8	49.83	8.5	2.3	5` UTR	Tob -	chrX_22_16090001	chrX_16090001	0.64	RAL-727
566	chrX	17058795	17058874	flea	5012	4757	22	79	'11-11	68.81	5.4	3.4	intron	CG45002 -	chrX_22_17055001	chrX_17055001	0.50	RAL-727
567	chrX	17441333	17441386	jockey	4676	4987	10	53	'3-7	63.07	7.5	1.2	intron	CG12994 -	chrX_10_17440001	chrX_17440001	0.30	RAL-727
568	chrX	17717460	17717520	copia	4888	254	11	60	'3-8	71.01	3.8	2.3	intron	CG42684 +	chrX_11_17715001	chrX_17715001	0.27	RAL-727
569	chrX	17837965	17838040	S-element	1715	7	13	75	'8-5	61.40	9.8	1.2	intron	CG6398 +	chrX_13_17835001	chrX_17835001	0.62	RAL-727
570	chrX	17969240	17969321	Stalker2	7248	7651	26	81	'12-14	64.14	3.6	5.7	intron	Sh -	chrX_26_17965001	chrX_17965001	0.46	RAL-727
571	chrX	18193687	18193717	hobo	32	2	13	30	'11-2	64.33	6.2	1.8	intron	Frq2 +	chrX_13_18190001	chrX_18190001	0.85	RAL-727
572	chrX	18218874	18218901	jockey	4528	4535	7	27	'4-3	58.57	7.8	0.8	intron	CG33639 -	chrX_7_18215001	chrX_18215001	0.57	RAL-727
573	chrX	18977313	18977375	pogo	9	2089	15	62	'7-8	65.89	6.7	1.9	intron	CG43759 +	chrX_15_18975001	chrX_18975001	0.47	RAL-727
574	chrX	19164956	19165032	1360	1	3387	29	76	'15-14	65.32	7.4	3.5	intron	RhoGAP18B -	chrX_29_19160001	chrX_19160001	0.52	RAL-727
575	chrX	19421420	19421444	Doc	3	27	9	24	'4-5	55.42	8.6	0.9	intron	kek5 +	chrX_9_19420001	chrX_19420001	0.44	RAL-727
576	chrX	19887071	19887140	P-element	2	5	17	69	'11-6	52.53	7.3	2.0	intron,exon	Hers +,amn -	chrX_17_19885001	chrX_19885001	0.65	RAL-727
577	chrX	19986915	19986984	Stalker2	7251	404	20	69	'4-16	63.71	6.7	2.6	intergenic	not near genes	chrX_20_19985001	chrX_19985001	0.20	RAL-727
578	chrX	20024348	20024373	jockey	4784	4809	5	25	'3-2	59.47	9.4	0.5	intron	Dop2R -	chrX_5_20020001	chrX_20020001	0.60	RAL-727
579	chrX	20351513	20351572	I-element	5349	4877	13	59	'6-7	61.13	3.8	2.7	intergenic	not near genes	chrX_13_20350001	chrX_20350001	0.46	RAL-727
580	chrX	20596631	20596711	297	395	3	25	80	'16-9	68.59	6.7	3.2	intron	RunxA -	chrX_25_20595001	chrX_20595001	0.64	RAL-727
581	chrX	21087581	21087634	mdg3	5252	5489	19	53	'13-6	61.87	2.6	5.3	intergenic	not near genes	chrX_19_21085001	chrX_21085001	0.68	RAL-727
582	chrX	21109614	21109685	Quasimodo	7361	5	8	71	'7-1	66.33	7.0	1.0	intron,intron	CG11566 +,stg1 +	chrX_8_21105001	chrX_21105001	0.88	RAL-727
583	chrX	21257092	21257170	roo	8668	410	26	78	'9-17	65.22	6.7	3.4	intron	CG32521 -	chrX_26_21255001	chrX_21255001	0.35	RAL-727
584	chrX	21270795	21270812	flea	240	257	5	17	'2-3	66.67	4.1	1.0	intron	CG32521 -	chrX_5_21270001	chrX_21270001	0.40	RAL-727
585	chrX	21322769	21322825	Juan	4206	4021	12	56	'6-6	65.65	4.6	2.1	intron	Dd -	chrX_12_21320001	chrX_21320001	0.50	RAL-727
586	chrX	21508565	21508645	pogo	3	2100	11	80	'7-4	67.53	7.1	1.4	intron	CR45082 -	chrX_11_21505001	chrX_21505001	0.64	RAL-727
587	chrX	21511470	21511538	gypsy5	405	6948	16	68	'11-5	60.83	5.9	2.3	intron	CR45082 -	chrX_16_21510001	chrX_21510001	0.69	RAL-727
588	chrX	21667900	21667927	gypsy2	6510	6496	9	27	'4-5	59.43	0.0	9.0	intergenic	not near genes	chrX_9_21665001	chrX_21665001	0.44	RAL-727
589	chrX	22252764	22252844	flea	4758	255	4	80	'2-2	69.67	3.3	0.9	intergenic	not near genes	chrX_4_22250001	chrX_22250001	0.50	RAL-727
590	chrX	22535243	22535320	pogo	1	2095	13	77	'8-5	65.55	6.0	1.9	intron,3` UTR,3` UTR	CG17600 +,S6kII +,CG17598 -	chrX_13_22535001	chrX_22535001	0.62	RAL-727
591	chrX	22689388	22689410	mariner2	36	29	9	22	'3-6	56.12	2.0	3.0	intron	CR44997 +	chrX_9_22685001	chrX_22685001	0.33	RAL-727
592	chrX	22920389	22920427	jockey	4979	4941	13	38	'4-9	60.32	7.4	1.5	intergenic	not near genes	chrX_13_22920001	chrX_22920001	0.31	RAL-727
593	chrX	23009952	23010010	Stalker2	7637	8	14	58	'10-4	53.82	8.5	1.5	exon	FucTC -	chrX_14_23005001	chrX_23005001	0.71	RAL-727
594	chrX	23065002	23065084	Burdock	6136	255	29	82	'11-18	63.32	9.0	2.9	intergenic	not near genes	chrX_29_23065001	chrX_23065001	0.38	RAL-727
595	chrY	2720334	2720354	Quasimodo	25	5	7	20	'3-4	69.41	3.1	1.7	intergenic	not near genes	chrY_7_2720001	chrY_2720001	0.43	RAL-727