SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	522868	522927	roo	8674	396	11	59	'4-7	63.19	0.5	7.3	intron	ush +	chr2L_11_520001	chr2L_520001	0.36	RAL-712
2	chr2L	1028146	1028209	I-element	2	5350	7	63	'6-1	62.32	3.8	1.5	intron	IA-2 -	chr2L_7_1025001	chr2L_1025001	0.86	RAL-712
3	chr2L	1369322	1369384	Quasimodo	7356	8	6	62	'2-4	58.80	1.1	2.9	intergenic	CG14346 +	chr2L_6_1365001	chr2L_1365001	0.33	RAL-712
4	chr2L	1786814	1786878	roo	8679	9070	13	64	'6-7	67.38	2.6	3.6	intergenic	not near genes	chr2L_13_1785001	chr2L_1785001	0.46	RAL-712
5	chr2L	1921460	1921491	mdg1	7073	406	8	31	'3-5	68.33	2.8	2.1	intron	CG7337 +	chr2L_8_1920001	chr2L_1920001	0.38	RAL-712
6	chr2L	1955804	1955872	mdg1	408	7038	11	68	'7-4	57.35	4.5	2.0	intron	erm -	chr2L_11_1955001	chr2L_1955001	0.64	RAL-712
7	chr2L	2086059	2086101	412	7086	487	4	42	'2-2	68.67	1.2	1.8	intron	dpr3 -	chr2L_4_2085001	chr2L_2085001	0.50	RAL-712
8	chr2L	2179021	2179058	Juan	4208	26	7	37	'5-2	62.19	2.8	1.8	intergenic	aop -	chr2L_7_2175001	chr2L_2175001	0.71	RAL-712
9	chr2L	2274479	2274554	blood	7387	7015	21	75	'9-12	63.69	3.2	5.0	intron	CR43753 -	chr2L_21_2270001	chr2L_2270001	0.43	RAL-712
10	chr2L	2621550	2621584	BS	5070	5036	6	34	'2-4	68.67	0.5	4.0	intergenic	not near genes	chr2L_6_2620001	chr2L_2620001	0.33	RAL-712
11	chr2L	4118512	4118540	X-element	34	6	8	28	'3-5	59.00	2.4	2.4	intergenic	not near genes	chr2L_8_4115001	chr2L_4115001	0.38	RAL-712
12	chr2L	4635512	4635567	pogo	8	2081	10	55	'5-5	67.02	1.0	5.0	intergenic	not near genes	chr2L_10_4635001	chr2L_4635001	0.50	RAL-712
13	chr2L	4896915	4896989	opus	5	7499	9	74	'2-7	61.88	2.2	2.8	intron	CG3036 +	chr2L_9_4895001	chr2L_4895001	0.22	RAL-712
14	chr2L	5350589	5350611	Juan	4212	4207	5	22	'2-3	59.46	4.3	0.9	intron	nompC +	chr2L_5_5350001	chr2L_5350001	0.40	RAL-712
15	chr2L	5598786	5598861	hobo	2937	1	12	75	'5-7	62.18	3.7	2.6	intergenic	CG18266 +	chr2L_12_5595001	chr2L_5595001	0.42	RAL-712
16	chr2L	5616795	5616875	Stalker2	7650	7248	14	80	'7-7	58.64	2.6	3.9	intron	CG14010 -	chr2L_14_5615001	chr2L_5615001	0.50	RAL-712
17	chr2L	5766735	5766807	1360	3	3	17	72	'8-9	68.20	3.6	3.7	intergenic	CG9171 -	chr2L_17_5765001	chr2L_5765001	0.47	RAL-712
18	chr2L	5805310	5805368	pogo	19	2094	7	58	'3-4	65.98	1.7	2.6	intergenic	CG11034 +	chr2L_7_5805001	chr2L_5805001	0.43	RAL-712
19	chr2L	7108672	7108733	opus	15	492	14	61	'2-12	67.21	4.6	2.5	intron	Pvf3 -	chr2L_14_7105001	chr2L_7105001	0.14	RAL-712
20	chr2L	8271434	8271463	jockey	37	10	7	29	'5-2	62.89	4.6	1.2	intron	Btk29A -	chr2L_7_8270001	chr2L_8270001	0.71	RAL-712
21	chr2L	8422338	8422409	roo	396	8661	15	71	'5-10	66.50	4.8	2.6	intron	Akap200 +	chr2L_15_8420001	chr2L_8420001	0.33	RAL-712
22	chr2L	8476740	8476762	Juan	4187	4209	4	22	'1-3	53.66	2.7	1.1	intron	d +	chr2L_4_8475001	chr2L_8475001	0.25	RAL-712
23	chr2L	9136726	9136793	roo	402	5	12	67	'7-5	61.77	4.7	2.1	intron	CG32982 +	chr2L_12_9135001	chr2L_9135001	0.58	RAL-712
24	chr2L	9310272	9310349	blood	7013	7387	25	77	'16-9	60.73	4.2	4.8	intergenic	not near genes	chr2L_25_9310001	chr2L_9310001	0.64	RAL-712
25	chr2L	9465632	9465657	jockey	33	8	8	25	'3-5	66.51	5.6	1.2	intergenic	not near genes	chr2L_8_9465001	chr2L_9465001	0.38	RAL-712
26	chr2L	9511698	9511760	412	7537	10	13	62	'6-7	63.77	3.5	2.9	intron	CG33298 +	chr2L_13_9510001	chr2L_9510001	0.46	RAL-712
27	chr2L	9521848	9521898	Quasimodo	27	7362	4	50	'1-3	70.33	2.5	1.1	intron	Oatp30B +	chr2L_4_9520001	chr2L_9520001	0.25	RAL-712
28	chr2L	10932342	10932368	jockey	4759	4785	8	26	'5-3	65.47	5.5	1.2	intron	dpr2 -	chr2L_8_10930001	chr2L_10930001	0.62	RAL-712
29	chr2L	11475153	11475186	jockey	4665	4698	17	33	'8-9	62.78	4.8	2.9	intergenic	not near genes	chr2L_17_11475001	chr2L_11475001	0.47	RAL-712
30	chr2L	11656865	11656937	1360	3386	2	13	72	'4-9	63.44	3.0	3.2	intergenic	not near genes	chr2L_13_11655001	chr2L_11655001	0.31	RAL-712
31	chr2L	11735769	11735784	jockey	18	34	5	15	'2-3	52.17	6.7	0.6	intergenic	not near genes	chr2L_5_11735001	chr2L_11735001	0.40	RAL-712
32	chr2L	11923566	11923645	HMS-Beagle	1	245	10	79	'9-1	65.12	1.8	3.6	intron	Pde1c -	chr2L_10_11920001	chr2L_11920001	0.90	RAL-712
33	chr2L	12045208	12045268	P-element	12	6	13	60	'6-7	44.91	3.6	2.8	intergenic	CG6785 -,CG6770 -	chr2L_13_12045001	chr2L_12045001	0.46	RAL-712
34	chr2L	12807240	12807297	Transpac	290	4923	7	57	'2-5	71.55	2.4	2.1	intergenic	CR43818 -	chr2L_7_12805001	chr2L_12805001	0.29	RAL-712
35	chr2L	12952022	12952094	hobo	1	2934	16	72	'12-4	61.81	3.0	4.0	intergenic	not near genes	chr2L_16_12950001	chr2L_12950001	0.75	RAL-712
36	chr2L	13328494	13328546	hobo	3	2916	9	52	'5-4	69.93	6.0	1.3	intron	CG43778 -	chr2L_9_13325001	chr2L_13325001	0.56	RAL-712
37	chr2L	14048855	14048931	roo	8667	407	4	76	'2-2	66.00	3.9	0.8	intron,3` UTR	nAChRalpha5 +,NimC4 +	chr2L_4_14045001	chr2L_14045001	0.50	RAL-712
38	chr2L	14389028	14389056	R1A1-element	5334	5309	6	28	'4-2	62.27	5.9	0.9	intergenic	not near genes	chr2L_6_14385001	chr2L_14385001	0.67	RAL-712
39	chr2L	14476259	14476316	pogo	2081	7	9	57	'2-7	64.20	1.9	3.1	intergenic	not near genes	chr2L_9_14475001	chr2L_14475001	0.22	RAL-712
40	chr2L	15182763	15182827	hobo	1	2926	16	64	'10-6	62.94	3.8	3.3	intron	CG4168 -	chr2L_16_15180001	chr2L_15180001	0.62	RAL-712
41	chr2L	15228771	15228831	mdg1	10	412	7	60	'3-4	60.79	2.0	2.3	3` UTR	ZnT35C -	chr2L_7_15225001	chr2L_15225001	0.43	RAL-712
42	chr2L	15359219	15359304	412	7	495	9	85	'6-3	61.38	2.4	2.6	intergenic	not near genes	chr2L_9_15355001	chr2L_15355001	0.67	RAL-712
43	chr2L	16067072	16067137	HMS-Beagle2	7191	12	12	65	'7-5	65.98	3.2	2.9	intron	beat-Ia +	chr2L_12_16065001	chr2L_16065001	0.58	RAL-712
44	chr2L	16109612	16109692	roo	407	8664	10	80	'6-4	59.53	2.5	2.9	intergenic	not near genes	chr2L_10_16105001	chr2L_16105001	0.60	RAL-712
45	chr2L	16410704	16410759	mdg3	5255	237	8	55	'4-4	56.37	0.4	5.7	intron	CG5888 -	chr2L_8_16410001	chr2L_16410001	0.50	RAL-712
46	chr2L	17008630	17008689	X-element	9	4711	6	59	'5-1	55.11	3.1	1.5	intergenic	not near genes	chr2L_6_17005001	chr2L_17005001	0.83	RAL-712
47	chr2L	17066083	17066128	flea	232	13	4	45	'2-2	68.56	1.8	1.4	intergenic	not near genes	chr2L_4_17065001	chr2L_17065001	0.50	RAL-712
48	chr2L	17456382	17456464	HMS-Beagle	246	6795	17	82	'3-14	64.05	0.4	12.1	intron	CG5050 +	chr2L_17_17455001	chr2L_17455001	0.18	RAL-712
49	chr2L	17525531	17525609	412	494	4	6	78	'3-3	69.71	2.7	1.6	intergenic	Dhc36C +,CG15144 -	chr2L_6_17525001	chr2L_17525001	0.50	RAL-712
50	chr2L	17549412	17549482	mdg1	7045	7455	12	70	'2-10	59.87	3.2	2.9	intergenic	not near genes	chr2L_12_17545001	chr2L_17545001	0.17	RAL-712
51	chr2L	18304614	18304690	pogo	1	2094	9	76	'5-4	67.88	2.4	2.6	intergenic	not near genes	chr2L_9_18300001	chr2L_18300001	0.56	RAL-712
52	chr2L	18341703	18341760	blood	7375	10	10	57	'5-5	65.71	3.6	2.2	intron	Fas3 +	chr2L_10_18340001	chr2L_18340001	0.50	RAL-712
53	chr2L	18375438	18375495	1360	3370	3	11	57	'1-10	64.68	3.9	2.2	intron	Fas3 +	chr2L_11_18375001	chr2L_18375001	0.09	RAL-712
54	chr2L	18568154	18568221	1360	3380	3	11	67	'4-7	62.09	4.0	2.2	intron	Pde11 -	chr2L_11_18565001	chr2L_18565001	0.36	RAL-712
55	chr2L	18828925	18828986	Stalker2	7639	7253	12	61	'7-5	63.54	4.1	2.4	3` UTR	CG17322 +	chr2L_12_18825001	chr2L_18825001	0.58	RAL-712
56	chr2L	19129324	19129393	FB	1	7	12	69	'8-4	60.85	4.6	2.1	3` UTR	l(2)37Cd +	chr2L_12_19125001	chr2L_19125001	0.67	RAL-712
57	chr2L	19242989	19243046	pogo	7	2085	9	57	'7-2	72.50	2.2	2.8	intergenic	not near genes	chr2L_9_19240001	chr2L_19240001	0.78	RAL-712
58	chr2L	19320467	19320516	Juan	4197	5	9	49	'3-6	63.26	4.0	1.8	intergenic	not near genes	chr2L_9_19320001	chr2L_19320001	0.33	RAL-712
59	chr2L	19437501	19437570	pogo	14	2100	10	69	'6-4	65.16	3.3	2.3	intron	CG10237 -	chr2L_10_19435001	chr2L_19435001	0.60	RAL-712
60	chr2L	19679752	19679780	Doc	50	15	7	28	'4-3	63.45	2.4	2.1	intron	Lar +	chr2L_7_19675001	chr2L_19675001	0.57	RAL-712
61	chr2L	19953175	19953245	roo	408	8674	12	70	'9-3	60.12	3.1	2.9	intron	sick +	chr2L_12_19950001	chr2L_19950001	0.75	RAL-712
62	chr2L	19998965	19999044	hobo	1	2709	20	79	'15-5	66.99	2.2	6.2	intron	CG43861 -	chr2L_20_19995001	chr2L_19995001	0.75	RAL-712
63	chr2L	20224409	20224489	297	395	3	13	80	'7-6	65.95	1.9	4.5	intergenic	not near genes	chr2L_13_20220001	chr2L_20220001	0.54	RAL-712
64	chr2L	21189985	21190069	roo	8661	409	21	84	'10-11	67.15	3.1	5.1	intron	Ret -	chr2L_21_21185001	chr2L_21185001	0.48	RAL-712
65	chr2L	21590833	21590863	opus	496	469	4	30	'2-2	65.74	2.8	1.1	intergenic	not near genes	chr2L_4_21590001	chr2L_21590001	0.50	RAL-712
66	chr2L	21898697	21898746	I-element	10	5344	6	49	'4-2	57.00	2.3	1.8	intergenic	CG11629 -	chr2L_6_21895001	chr2L_21895001	0.67	RAL-712
67	chr2L	22112994	22113024	pogo	23	2070	5	30	'3-2	78.13	3.7	1.1	intergenic	not near genes	chr2L_5_22110001	chr2L_22110001	0.60	RAL-712
68	chr2L	22685602	22685675	roo	8667	9067	12	73	'6-6	67.91	3.1	2.9	intron	CG40006 -	chr2L_12_22685001	chr2L_22685001	0.50	RAL-712
69	chr2L	23068852	23068929	1360	1	3388	21	77	'9-12	65.08	2.9	5.4	intergenic	CR43242 +,Spf45 -	chr2L_21_23065001	chr2L_23065001	0.43	RAL-712
70	chr2L	23295819	23295856	micropia	424	4967	6	37	'1-5	64.02	1.2	2.7	intergenic	not near genes	chr2L_6_23295001	chr2L_23295001	0.17	RAL-712
71	chr2R	557678	557755	gtwin	476	6	15	77	'8-7	61.71	5.1	2.5	intron	CG40378 +	chr2R_15_555001	chr2R_555001	0.53	RAL-712
72	chr2R	1478346	1478398	mdg1	7065	421	6	52	'2-4	65.33	1.8	2.1	intergenic	not near genes	chr2R_6_1475001	chr2R_1475001	0.33	RAL-712
73	chr2R	1592428	1592455	springer	33	7142	7	27	'4-3	59.84	5.1	1.1	intron	CG17691 +	chr2R_7_1590001	chr2R_1590001	0.57	RAL-712
74	chr2R	1596561	1596623	gypsy	444	6989	8	62	'1-7	63.73	3.4	1.8	intergenic	CG17691 +	chr2R_8_1595001	chr2R_1595001	0.12	RAL-712
75	chr2R	1655630	1655706	Bari1	6	1704	12	76	'5-7	66.58	2.0	4.0	intron	CG41520 +	chr2R_12_1655001	chr2R_1655001	0.42	RAL-712
76	chr2R	1683364	1683413	1731	4627	4343	7	49	'6-1	63.54	2.9	1.8	intron	CG41520 +	chr2R_7_1680001	chr2R_1680001	0.86	RAL-712
77	chr2R	3290813	3290888	roo	8661	400	12	75	'5-7	62.95	2.3	3.6	intergenic	not near genes	chr2R_12_3290001	chr2R_3290001	0.42	RAL-712
78	chr2R	4186973	4187043	1360	3386	6	8	70	'7-1	67.41	4.7	1.4	3` UTR	CG40127 -	chr2R_8_4185001	chr2R_4185001	0.88	RAL-712
79	chr2R	4747203	4747280	pogo	4	1	10	77	'5-5	68.20	3.8	2.1	intron	conu +	chr2R_10_4745001	chr2R_4745001	0.50	RAL-712
80	chr2R	4900373	4900395	jockey	7	29	4	22	'2-2	62.18	5.0	0.7	intron	CG44102 -	chr2R_4_4900001	chr2R_4900001	0.50	RAL-712
81	chr2R	4978463	4978545	297	6581	394	13	82	'8-5	68.79	3.7	2.8	intron	Ir41a +	chr2R_13_4975001	chr2R_4975001	0.62	RAL-712
82	chr2R	5421468	5421523	1360	20	3385	13	55	'4-9	66.38	3.5	2.9	intron	laccase2 +	chr2R_13_5420001	chr2R_5420001	0.31	RAL-712
83	chr2R	5607033	5607102	Transpac	299	2	11	69	'2-9	64.65	5.2	1.8	intergenic	not near genes	chr2R_11_5605001	chr2R_5605001	0.18	RAL-712
84	chr2R	5892512	5892593	blood	7012	378	25	81	'14-11	63.30	3.5	5.6	intergenic	not near genes	chr2R_25_5890001	chr2R_5890001	0.56	RAL-712
85	chr2R	6106422	6106499	Tabor	3	7323	14	77	'7-7	61.81	2.4	4.1	intron	EcR -	chr2R_14_6105001	chr2R_6105001	0.50	RAL-712
86	chr2R	6157442	6157461	I-element	5	24	6	19	'4-2	61.11	4.6	1.1	intron	EcR -	chr2R_6_6155001	chr2R_6155001	0.67	RAL-712
87	chr2R	6170459	6170524	roo	9062	5	7	65	'4-3	64.77	2.4	2.1	intergenic	not near genes	chr2R_7_6170001	chr2R_6170001	0.57	RAL-712
88	chr2R	6180336	6180357	Doc	31	9	10	21	'6-4	63.28	3.8	2.1	3` UTR	CG8343 +	chr2R_10_6180001	chr2R_6180001	0.60	RAL-712
89	chr2R	6492908	6492974	copia	1	242	12	66	'8-4	63.70	2.5	3.4	intergenic	not near genes	chr2R_12_6490001	chr2R_6490001	0.67	RAL-712
90	chr2R	6613145	6613216	P-element	3	4	16	71	'6-10	50.31	4.6	2.9	intron	jing +	chr2R_16_6610001	chr2R_6610001	0.38	RAL-712
91	chr2R	6759124	6759195	copia	250	4873	12	71	'3-9	66.67	2.7	3.2	intergenic	CG9436 -	chr2R_12_6755001	chr2R_6755001	0.25	RAL-712
92	chr2R	6968096	6968152	FB	9	12	6	56	'4-2	61.20	2.8	1.6	intron,intron	mim -,CheB42c -	chr2R_6_6965001	chr2R_6965001	0.67	RAL-712
93	chr2R	7208056	7208090	jockey	14	4968	4	34	'3-1	58.33	6.6	0.5	intron	pk +	chr2R_4_7205001	chr2R_7205001	0.75	RAL-712
94	chr2R	7248990	7249057	P-element	9	2885	9	67	'4-5	51.85	3.7	1.9	intergenic	Gadd45 +	chr2R_9_7245001	chr2R_7245001	0.44	RAL-712
95	chr2R	7488678	7488710	1360	1	35	16	32	'5-11	69.98	4.9	2.7	intron	wech -	chr2R_16_7485001	chr2R_7485001	0.31	RAL-712
96	chr2R	7600224	7600295	roo	8663	9062	16	71	'11-5	64.79	4.1	3.1	intron	CG1358 -	chr2R_16_7600001	chr2R_7600001	0.69	RAL-712
97	chr2R	7618087	7618117	jockey	4702	4672	7	30	'4-3	61.80	2.0	2.3	intron	CG1358 -	chr2R_7_7615001	chr2R_7615001	0.57	RAL-712
98	chr2R	7752724	7752743	roo	8681	8663	4	19	'2-2	63.38	3.6	0.9	intron,intron	CG30497 -,CG45093 -	chr2R_4_7750001	chr2R_7750001	0.50	RAL-712
99	chr2R	7759761	7759827	pogo	3	2086	4	66	'1-3	61.33	2.5	1.1	intron,intron	CG30497 -,CG45093 -	chr2R_4_7755001	chr2R_7755001	0.25	RAL-712
100	chr2R	8144389	8144464	roo	8671	411	10	75	'6-4	63.42	3.2	2.4	intron	Lpin -	chr2R_10_8140001	chr2R_8140001	0.60	RAL-712
101	chr2R	8768861	8768932	invader4	323	8	14	71	'10-4	65.25	4.1	2.7	intergenic	CR44278 -	chr2R_14_8765001	chr2R_8765001	0.71	RAL-712
102	chr2R	9060393	9060426	F-element	4639	4672	9	33	'7-2	70.67	1.1	4.3	intron	CG13743 -	chr2R_9_9060001	chr2R_9060001	0.78	RAL-712
103	chr2R	9343463	9343534	roo	397	8662	16	71	'4-12	70.13	3.8	3.3	intron,intron	CG13739 -,CG13954 -	chr2R_16_9340001	chr2R_9340001	0.25	RAL-712
104	chr2R	9408177	9408227	FB	4	23	11	50	'5-6	65.84	4.1	2.2	intron	wun -	chr2R_11_9405001	chr2R_9405001	0.45	RAL-712
105	chr2R	9870954	9871033	roo	8666	409	14	79	'5-9	64.41	4.1	2.7	intron	cbx -	chr2R_14_9870001	chr2R_9870001	0.36	RAL-712
106	chr2R	10022062	10022145	mdg3	5250	246	13	83	'7-6	64.31	2.3	3.9	intron	Pka-R2 -	chr2R_13_10020001	chr2R_10020001	0.54	RAL-712
107	chr2R	10404964	10405029	mdg1	413	8	8	65	'6-2	58.76	2.0	2.7	intron	CG42732 -	chr2R_8_10400001	chr2R_10400001	0.75	RAL-712
108	chr2R	10529095	10529176	297	2	395	12	81	'7-5	70.61	2.9	3.1	intron	lola -	chr2R_12_10525001	chr2R_10525001	0.58	RAL-712
109	chr2R	10761098	10761166	hobo	5	2934	16	68	'9-7	63.73	2.8	4.2	intron,intron	CG33144 -,CR43605 +	chr2R_16_10760001	chr2R_10760001	0.56	RAL-712
110	chr2R	10992783	10992819	BS	4869	4831	14	36	'9-5	63.82	6.4	1.9	intron	luna -	chr2R_14_10990001	chr2R_10990001	0.64	RAL-712
111	chr2R	11171884	11171912	jockey	36	8	10	28	'8-2	59.22	3.2	2.4	intron,intron	CG13229 -,shn +	chr2R_10_11170001	chr2R_11170001	0.80	RAL-712
112	chr2R	11204598	11204628	P-element	2855	3	12	30	'8-4	45.82	4.8	2.1	intron	shn +	chr2R_12_11200001	chr2R_11200001	0.67	RAL-712
113	chr2R	11276803	11276885	Transpac	4918	310	15	82	'9-6	69.02	3.4	3.4	intergenic	not near genes	chr2R_15_11275001	chr2R_11275001	0.60	RAL-712
114	chr2R	11659065	11659135	1360	7	3388	16	70	'15-1	65.58	5.6	2.4	intron	Roc2 -	chr2R_16_11655001	chr2R_11655001	0.94	RAL-712
115	chr2R	11700237	11700322	opus	7113	498	12	85	'8-4	71.25	3.5	2.7	intergenic	Ir48b -	chr2R_12_11700001	chr2R_11700001	0.67	RAL-712
116	chr2R	11702326	11702405	blood	379	4	11	79	'7-4	65.47	2.5	3.1	exon	Ir48b -	chr2R_11_11700001	chr2R_11700001	0.64	RAL-712
117	chr2R	12108174	12108253	297	3	394	8	79	'4-4	68.25	4.1	1.6	intron	jeb -	chr2R_8_12105001	chr2R_12105001	0.50	RAL-712
118	chr2R	12185331	12185400	accord	7383	8	9	69	'5-4	64.30	5.9	1.3	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_9_12185001	chr2R_12185001	0.56	RAL-712
119	chr2R	12452227	12452304	pogo	2100	4	13	77	'7-6	67.30	3.0	3.2	3` UTR	Dyb +	chr2R_13_12450001	chr2R_12450001	0.54	RAL-712
120	chr2R	12479050	12479124	FB	1	2	7	74	'6-1	66.59	1.1	3.3	intron	Dh44-R2 +	chr2R_7_12475001	chr2R_12475001	0.86	RAL-712
121	chr2R	12597295	12597355	roo	11	9062	12	60	'8-4	67.33	5.1	2.0	intron	Amph +	chr2R_12_12595001	chr2R_12595001	0.67	RAL-712
122	chr2R	12718709	12718741	G2	186	218	14	32	'9-5	61.95	4.4	2.6	intron	CG42663 +	chr2R_14_12715001	chr2R_12715001	0.64	RAL-712
123	chr2R	12728911	12728934	Doc	3	23	5	23	'3-2	63.42	4.9	0.8	intron	CG42663 +	chr2R_5_12725001	chr2R_12725001	0.60	RAL-712
124	chr2R	12802152	12802226	flea	4758	255	4	74	'3-1	60.28	4.2	0.8	intergenic	sca +	chr2R_4_12800001	chr2R_12800001	0.75	RAL-712
125	chr2R	13080910	13080942	HMS-Beagle	6826	6794	12	32	'6-6	63.84	4.1	2.4	intergenic	not near genes	chr2R_12_13080001	chr2R_13080001	0.50	RAL-712
126	chr2R	13269877	13269923	blood	7040	371	11	46	'1-10	63.12	3.3	2.6	intron	Dh31-R -	chr2R_11_13265001	chr2R_13265001	0.09	RAL-712
127	chr2R	13430191	13430253	Tc3	307	312	9	62	'7-2	55.12	4.2	1.7	intron	CG42321 -	chr2R_9_13430001	chr2R_13430001	0.78	RAL-712
128	chr2R	13624844	13624908	hopper	1410	1405	7	64	'5-2	59.55	5.2	1.1	intron	fas +	chr2R_7_13620001	chr2R_13620001	0.71	RAL-712
129	chr2R	13780289	13780313	I-element	29	4	5	24	'3-2	61.62	2.6	1.4	intron	Cpr50Ca +	chr2R_5_13780001	chr2R_13780001	0.60	RAL-712
130	chr2R	14035584	14035642	I-element	4	5346	10	58	'9-1	61.86	3.1	2.4	intron	mam +	chr2R_10_14035001	chr2R_14035001	0.90	RAL-712
131	chr2R	14078340	14078402	hopper	6	1402	8	62	'3-5	65.77	1.9	2.8	intron	Prosap -	chr2R_8_14075001	chr2R_14075001	0.38	RAL-712
132	chr2R	15295295	15295397	roo	8666	9040	4	102	'3-1	66.42	2.2	1.2	intron	Trpm -	chr2R_4_15295001	chr2R_15295001	0.75	RAL-712
133	chr2R	15392565	15392648	flea	4753	253	14	83	'8-6	69.27	4.5	2.5	intergenic	not near genes	chr2R_14_15390001	chr2R_15390001	0.57	RAL-712
134	chr2R	15568963	15569066	accord	7031	7029	4	103	'2-2	75.56	4.4	0.7	intron,5` UTR	Flo1 -,CG30466 +	chr2R_4_15565001	chr2R_15565001	0.50	RAL-712
135	chr2R	16401415	16401443	hobo	4	32	7	28	'3-4	64.13	6.5	0.9	intron	Sema-2b +	chr2R_7_16400001	chr2R_16400001	0.43	RAL-712
136	chr2R	16432007	16432061	blood	1	351	17	54	'13-4	65.15	4.1	3.3	intergenic	CG4398 +,Sema-2b +	chr2R_17_16430001	chr2R_16430001	0.76	RAL-712
137	chr2R	16849870	16849936	Max-element	3	292	9	66	'6-3	59.90	3.2	2.1	5` UTR	CR44467 +	chr2R_9_16845001	chr2R_16845001	0.67	RAL-712
138	chr2R	17232192	17232264	roo	1	401	16	72	'8-8	68.23	2.5	4.6	intron	mbl +	chr2R_16_17230001	chr2R_17230001	0.50	RAL-712
139	chr2R	17893023	17893056	Doc	36	3	7	33	'1-6	69.09	3.8	1.5	intron	Elk +	chr2R_7_17890001	chr2R_17890001	0.14	RAL-712
140	chr2R	18171368	18171562	P-element	2701	2886	11	194	'1-10	46.02	6.1	1.5	intron	Dgp-1 -	chr2R_11_18170001	chr2R_18170001	0.09	RAL-712
141	chr2R	18358264	18358286	jockey	4767	4787	5	22	'3-2	59.32	4.3	0.9	intergenic	not near genes	chr2R_5_18355001	chr2R_18355001	0.60	RAL-712
142	chr2R	19030759	19030834	blood	7023	370	10	75	'8-2	58.33	2.3	3.0	intron	5-HT1B -	chr2R_10_19030001	chr2R_19030001	0.80	RAL-712
143	chr2R	19354738	19354822	Transpac	4918	311	24	84	'13-11	67.66	4.6	4.3	intron	Rgk1 -	chr2R_24_19350001	chr2R_19350001	0.54	RAL-712
144	chr2R	19376329	19376403	pogo	2092	4	12	74	'6-6	68.05	1.5	4.8	intron	CG10062 +	chr2R_12_19375001	chr2R_19375001	0.50	RAL-712
145	chr2R	20228497	20228562	roo	8662	9055	12	65	'7-5	68.49	2.7	3.2	intergenic	not near genes	chr2R_12_20225001	chr2R_20225001	0.58	RAL-712
146	chr2R	21454190	21454274	opus	110	7500	9	84	'7-2	72.41	3.6	2.0	intron	Sdc -	chr2R_9_21450001	chr2R_21450001	0.78	RAL-712
147	chr2R	21503624	21503682	1360	3385	3325	12	58	'7-5	59.51	1.7	4.4	intron	MESK2 +	chr2R_12_21500001	chr2R_21500001	0.58	RAL-712
148	chr2R	22016587	22016663	297	6585	392	10	76	'3-7	69.60	1.5	4.0	intron	CG34370 -	chr2R_10_22015001	chr2R_22015001	0.30	RAL-712
149	chr2R	22208485	22208509	I-element	32	9	6	24	'1-5	65.30	3.8	1.2	3` UTR	CG3264 -	chr2R_6_22205001	chr2R_22205001	0.17	RAL-712
150	chr2R	22406924	22406979	pogo	2077	5	13	55	'3-10	63.33	3.5	2.9	intron	CG6044 +	chr2R_13_22405001	chr2R_22405001	0.23	RAL-712
151	chr2R	22907739	22907818	roo	8664	409	6	79	'3-3	69.81	1.9	2.1	intron	nahoda +	chr2R_6_22905001	chr2R_22905001	0.50	RAL-712
152	chr2R	24202276	24202332	mdg1	7436	7040	5	56	'4-1	68.80	2.1	1.6	exon	CG11406 -	chr2R_5_24200001	chr2R_24200001	0.80	RAL-712
153	chr2R	24487280	24487336	I-element	5344	2	12	56	'2-10	60.85	4.2	2.3	intron	CG13579 +	chr2R_12_24485001	chr2R_24485001	0.17	RAL-712
154	chr2R	24689987	24690064	roo	8662	403	9	77	'6-3	67.26	3.1	2.2	intergenic	not near genes	chr2R_9_24685001	chr2R_24685001	0.67	RAL-712
155	chr2R	24976395	24976459	297	10	6967	5	64	'2-3	63.47	3.3	1.2	intergenic	emp -	chr2R_5_24975001	chr2R_24975001	0.40	RAL-712
156	chr3L	61971	62048	roo	8664	405	15	77	'4-11	66.70	2.9	3.8	intergenic	not near genes	chr3L_15_60001	chr3L_60001	0.27	RAL-712
157	chr3L	80704	80727	opus	498	7478	6	23	'3-3	64.36	3.6	1.3	intergenic	not near genes	chr3L_6_80001	chr3L_80001	0.50	RAL-712
158	chr3L	159084	159155	roo	11	410	13	71	'9-4	62.89	2.2	4.1	intron	p130CAS +	chr3L_13_155001	chr3L_155001	0.69	RAL-712
159	chr3L	548698	548772	FB	1	2	11	74	'4-7	62.21	3.2	2.6	intron	hipk +	chr3L_11_545001	chr3L_545001	0.36	RAL-712
160	chr3L	905428	905450	hobo	25	3	11	22	'7-4	56.81	5.7	1.6	intergenic	not near genes	chr3L_11_905001	chr3L_905001	0.64	RAL-712
161	chr3L	1073849	1073903	412	3	470	9	54	'6-3	64.99	3.9	1.8	intron	bab1 -	chr3L_9_1070001	chr3L_1070001	0.67	RAL-712
162	chr3L	1630094	1630118	jockey	31	8	8	24	'3-5	58.20	2.2	2.5	intergenic	nSyb -	chr3L_8_1630001	chr3L_1630001	0.38	RAL-712
163	chr3L	1979190	1979259	roo	409	8664	12	69	'9-3	66.19	1.1	5.7	intergenic	not near genes	chr3L_12_1975001	chr3L_1975001	0.75	RAL-712
164	chr3L	2172278	2172349	Tabor	7323	5	15	71	'9-6	59.05	3.4	3.4	intergenic	not near genes	chr3L_15_2170001	chr3L_2170001	0.60	RAL-712
165	chr3L	2312725	2312796	HMS-Beagle	6800	239	13	71	'11-2	67.90	2.2	4.1	intergenic	not near genes	chr3L_13_2310001	chr3L_2310001	0.85	RAL-712
166	chr3L	2339327	2339394	297	6586	6965	10	67	'9-1	64.72	3.5	2.2	intron	MsR1 +	chr3L_10_2335001	chr3L_2335001	0.90	RAL-712
167	chr3L	2430475	2430553	Stalker2	402	2	16	78	'9-7	59.72	3.0	4.0	intron	CG45186 +	chr3L_16_2430001	chr3L_2430001	0.56	RAL-712
168	chr3L	2805057	2805079	Doc	3	25	6	22	'3-3	58.45	4.0	1.2	intron	CG43444 -	chr3L_6_2805001	chr3L_2805001	0.50	RAL-712
169	chr3L	3249253	3249315	P-element	6	2880	6	62	'5-1	50.14	6.0	0.9	intergenic	CG43389 +,CR43626 +	chr3L_6_3245001	chr3L_3245001	0.83	RAL-712
170	chr3L	3662896	3662979	opus	111	497	7	83	'3-4	66.79	2.7	1.9	intergenic	not near genes	chr3L_7_3660001	chr3L_3660001	0.43	RAL-712
171	chr3L	3694218	3694294	412	7	495	16	76	'7-9	63.45	6.1	2.3	3` UTR	CR43485 -	chr3L_16_3690001	chr3L_3690001	0.44	RAL-712
172	chr3L	3729091	3729142	hopper	5	25	9	51	'6-3	65.41	2.6	2.5	intron	CG32264 -	chr3L_9_3725001	chr3L_3725001	0.67	RAL-712
173	chr3L	3925878	3925933	P-element	4	2868	9	55	'6-3	48.10	3.3	2.1	intron	Eip63F-1 -	chr3L_9_3925001	chr3L_3925001	0.67	RAL-712
174	chr3L	4082931	4082998	412	7068	7546	6	67	'3-3	69.11	3.3	1.4	intron	Gad1 -	chr3L_6_4080001	chr3L_4080001	0.50	RAL-712
175	chr3L	4350622	4350700	invader4	321	2758	17	78	'10-7	65.61	2.8	4.5	intron	Cip4 -	chr3L_17_4350001	chr3L_4350001	0.59	RAL-712
176	chr3L	4740134	4740206	roo	8664	400	17	72	'14-3	66.62	4.3	3.2	intron	RhoGEF64C +	chr3L_17_4740001	chr3L_4740001	0.82	RAL-712
177	chr3L	4741782	4741843	roo	8671	398	11	61	'5-6	65.56	2.7	3.0	intron	RhoGEF64C +	chr3L_11_4740001	chr3L_4740001	0.45	RAL-712
178	chr3L	5063693	5063769	mdg3	5493	5252	9	76	'1-8	63.80	3.8	1.9	intron	Con -	chr3L_9_5060001	chr3L_5060001	0.11	RAL-712
179	chr3L	5089056	5089110	roo	8670	387	11	54	'7-4	67.09	3.9	2.2	intergenic	not near genes	chr3L_11_5085001	chr3L_5085001	0.64	RAL-712
180	chr3L	5266962	5267018	roo	8677	398	8	56	'5-3	60.83	2.5	2.3	intron	shep -	chr3L_8_5265001	chr3L_5265001	0.62	RAL-712
181	chr3L	5406689	5406756	Max-element	8520	8233	11	67	'4-7	60.57	3.7	2.3	intergenic	not near genes	chr3L_11_5405001	chr3L_5405001	0.36	RAL-712
182	chr3L	5663961	5664012	hobo	2937	24	9	51	'5-4	67.34	4.5	1.6	intron	sif +	chr3L_9_5660001	chr3L_5660001	0.56	RAL-712
183	chr3L	5974945	5974973	jockey	4702	4721	8	28	'5-3	58.63	6.2	1.1	intron	CG10479 -	chr3L_8_5970001	chr3L_5970001	0.62	RAL-712
184	chr3L	6501012	6501077	pogo	4	15	6	65	'3-3	67.34	2.2	1.9	intron	sfl +	chr3L_6_6500001	chr3L_6500001	0.50	RAL-712
185	chr3L	6549369	6549445	hopper	3	1	18	76	'5-13	63.38	3.5	4.0	3` UTR	sfl +	chr3L_18_6545001	chr3L_6545001	0.28	RAL-712
186	chr3L	7962922	7962995	pogo	8	2099	18	73	'7-11	64.93	3.3	4.2	intergenic	not near genes	chr3L_18_7960001	chr3L_7960001	0.39	RAL-712
187	chr3L	8320417	8320471	HMS-Beagle	242	24	10	54	'5-5	73.56	2.7	2.7	intergenic	CG13670 +	chr3L_10_8320001	chr3L_8320001	0.50	RAL-712
188	chr3L	9590153	9590235	Burdock	6390	6137	9	82	'6-3	63.85	2.0	3.0	intron	CG42673 +	chr3L_9_9590001	chr3L_9590001	0.67	RAL-712
189	chr3L	9760784	9760853	roo	8664	398	13	69	'8-5	63.59	3.4	3.0	intergenic	CR45407 +,CG42268 -	chr3L_13_9760001	chr3L_9760001	0.62	RAL-712
190	chr3L	9925789	9925854	HMS-Beagle2	7182	6887	17	65	'4-13	60.89	1.9	5.9	intron	CG34356 +	chr3L_17_9925001	chr3L_9925001	0.24	RAL-712
191	chr3L	10564593	10564666	roo	8669	406	11	73	'6-5	63.23	3.1	2.7	intron	A2bp1 +	chr3L_11_10560001	chr3L_10560001	0.55	RAL-712
192	chr3L	10923059	10923144	Burdock	256	6134	15	85	'6-9	68.70	2.5	4.3	intergenic	not near genes	chr3L_15_10920001	chr3L_10920001	0.40	RAL-712
193	chr3L	12865306	12865376	hopper	6	1411	11	70	'6-5	58.40	1.6	4.2	intergenic	not near genes	chr3L_11_12865001	chr3L_12865001	0.55	RAL-712
194	chr3L	13223668	13223692	Tirant	9	8140	5	24	'3-2	61.33	2.9	1.3	intergenic	not near genes	chr3L_5_13220001	chr3L_13220001	0.60	RAL-712
195	chr3L	13322645	13322723	Tabor	487	5	13	78	'8-5	56.66	3.6	2.8	intergenic	not near genes	chr3L_13_13320001	chr3L_13320001	0.62	RAL-712
196	chr3L	13457831	13457916	blood	7009	379	26	85	'18-8	64.98	4.4	4.8	intron	CG10738 +	chr3L_26_13455001	chr3L_13455001	0.69	RAL-712
197	chr3L	13471658	13471688	jockey	4696	4667	8	30	'3-5	62.14	1.7	3.0	intron	CG10089 -	chr3L_8_13470001	chr3L_13470001	0.38	RAL-712
198	chr3L	13644342	13644409	hobo	7	2935	11	67	'7-4	63.84	3.7	2.3	intron	bru-3 -	chr3L_11_13640001	chr3L_13640001	0.64	RAL-712
199	chr3L	13688734	13688801	Stalker4	3	398	8	67	'5-3	63.55	3.2	1.9	intron	bru-3 -	chr3L_8_13685001	chr3L_13685001	0.62	RAL-712
200	chr3L	14641615	14641659	mdg1	24	7446	4	44	'1-3	63.33	4.0	0.8	intron	dlp +	chr3L_4_14640001	chr3L_14640001	0.25	RAL-712
201	chr3L	15010856	15010932	Transpac	4918	5221	11	76	'4-7	63.97	3.0	2.8	intron	Reck -	chr3L_11_15010001	chr3L_15010001	0.36	RAL-712
202	chr3L	15035143	15035205	pogo	2085	4	13	62	'3-10	69.15	3.9	2.7	intron	Sytbeta -	chr3L_13_15035001	chr3L_15035001	0.23	RAL-712
203	chr3L	15514403	15514468	HMS-Beagle	240	7	12	65	'7-5	60.40	3.1	2.9	intergenic	not near genes	chr3L_12_15510001	chr3L_15510001	0.58	RAL-712
204	chr3L	16559727	16559804	copia	255	4871	8	77	'4-4	64.95	2.7	2.2	intergenic	not near genes	chr3L_8_16555001	chr3L_16555001	0.50	RAL-712
205	chr3L	16744184	16744257	hobo	1	2935	20	73	'13-7	64.99	4.2	3.8	intergenic	not near genes	chr3L_20_16740001	chr3L_16740001	0.65	RAL-712
206	chr3L	16837235	16837289	Juan	5	4205	8	54	'6-2	59.67	3.3	1.9	intergenic	not near genes	chr3L_8_16835001	chr3L_16835001	0.75	RAL-712
207	chr3L	17152547	17152620	412	5	490	14	73	'11-3	61.64	4.4	2.6	intron	Rbp6 -	chr3L_14_17150001	chr3L_17150001	0.79	RAL-712
208	chr3L	17705339	17705397	Juan	5	4204	14	58	'9-5	67.39	2.8	3.7	intron	Ccn +	chr3L_14_17705001	chr3L_17705001	0.64	RAL-712
209	chr3L	18694012	18694095	roo	397	8669	6	83	'1-5	58.80	0.0	6.0	intergenic	CR43987 -,CG6893 +	chr3L_6_18690001	chr3L_18690001	0.17	RAL-712
210	chr3L	18815330	18815348	pogo	1	19	4	18	'1-3	61.67	6.2	0.6	intron	CG14073 -	chr3L_4_18815001	chr3L_18815001	0.25	RAL-712
211	chr3L	18968722	18968762	jockey	4691	4980	5	40	'3-2	57.00	3.6	1.1	intergenic	not near genes	chr3L_5_18965001	chr3L_18965001	0.60	RAL-712
212	chr3L	19349620	19349637	jockey	10	26	5	17	'3-2	65.50	3.8	1.0	intron	CG32206 -	chr3L_5_19345001	chr3L_19345001	0.60	RAL-712
213	chr3L	19951195	19951220	Ivk	1	26	4	25	'1-3	64.00	5.3	0.6	intron	Ac76E +	chr3L_4_19950001	chr3L_19950001	0.25	RAL-712
214	chr3L	20139035	20139113	roo	411	8669	18	78	'12-6	68.50	3.3	4.2	intergenic	gig +,CG7328 -	chr3L_18_20135001	chr3L_20135001	0.67	RAL-712
215	chr3L	20224152	20224225	Chimpo	179	1	12	73	'5-7	64.91	3.4	2.7	intron	CG17147 +	chr3L_12_20220001	chr3L_20220001	0.42	RAL-712
216	chr3L	20361691	20361769	pogo	2097	7	16	78	'9-7	63.09	3.3	3.7	intergenic	DNApol-alpha60 -,Toll-9 -	chr3L_16_20360001	chr3L_20360001	0.56	RAL-712
217	chr3L	20656483	20656523	I-element	5339	19	9	40	'2-7	60.69	1.7	3.3	intergenic	not near genes	chr3L_9_20655001	chr3L_20655001	0.22	RAL-712
218	chr3L	21165432	21165504	flea	251	4762	8	72	'5-3	64.17	2.4	2.4	intron	Ac78C -	chr3L_8_21165001	chr3L_21165001	0.62	RAL-712
219	chr3L	21215836	21215916	Bari1	1	1704	20	80	'8-12	63.93	3.6	4.3	3` UTR	CG10508 +	chr3L_20_21215001	chr3L_21215001	0.40	RAL-712
220	chr3L	21821423	21821509	Tc3	312	317	4	86	'3-1	63.66	2.8	1.1	intergenic	not near genes	chr3L_4_21820001	chr3L_21820001	0.75	RAL-712
221	chr3L	21864794	21864868	pogo	2098	7	9	74	'5-4	66.80	2.8	2.4	intron	mub +	chr3L_9_21860001	chr3L_21860001	0.56	RAL-712
222	chr3L	21869746	21869805	412	17	7541	10	59	'5-5	60.62	4.6	1.8	intron	mub +	chr3L_10_21865001	chr3L_21865001	0.50	RAL-712
223	chr3L	21974417	21974452	GATE	31	8267	8	35	'5-3	70.11	4.7	1.4	intron	CG7470 +	chr3L_8_21970001	chr3L_21970001	0.62	RAL-712
224	chr3L	22338810	22338843	jockey	4669	4702	9	33	'3-6	64.20	6.2	1.2	intron	Ten-m -	chr3L_9_22335001	chr3L_22335001	0.33	RAL-712
225	chr3L	22635699	22635760	hopper	1403	1411	9	61	'2-7	61.37	1.8	3.2	intron	CG14459 -	chr3L_9_22635001	chr3L_22635001	0.22	RAL-712
226	chr3L	22706849	22706897	mdg1	7459	7071	11	48	'9-2	60.82	4.4	2.0	intergenic	not near genes	chr3L_11_22705001	chr3L_22705001	0.82	RAL-712
227	chr3L	23146484	23146522	1360	3	40	8	38	'3-5	70.97	6.4	1.1	intergenic	not near genes	chr3L_8_23145001	chr3L_23145001	0.38	RAL-712
228	chr3L	23227607	23227675	412	493	13	13	68	'7-6	69.95	3.1	3.2	intron	nAChRalpha4 +	chr3L_13_23225001	chr3L_23225001	0.54	RAL-712
229	chr3L	23237454	23237509	412	23	490	8	55	'2-6	62.16	3.1	2.0	intron	nAChRalpha4 +	chr3L_8_23235001	chr3L_23235001	0.25	RAL-712
230	chr3L	25272541	25272560	1360	3386	24	4	19	'2-2	66.16	3.2	1.0	intron	CG40467 -	chr3L_4_25270001	chr3L_25270001	0.50	RAL-712
231	chr3L	25752311	25752385	P-element	2	1	11	74	'7-4	48.71	3.2	2.6	intergenic	not near genes	chr3L_11_25750001	chr3L_25750001	0.64	RAL-712
232	chr3L	26015752	26015770	Quasimodo	7359	7341	4	18	'2-2	65.86	4.0	0.8	intergenic	not near genes	chr3L_4_26015001	chr3L_26015001	0.50	RAL-712
233	chr3L	27415236	27415304	transib2	2812	1	5	68	'1-4	65.50	3.3	1.2	intron	Dbp80 +	chr3L_5_27415001	chr3L_27415001	0.20	RAL-712
234	chr3R	433124	433141	1731	297	314	8	17	'4-4	60.50	5.6	1.2	intergenic	not near genes	chr3R_8_430001	chr3R_430001	0.50	RAL-712
235	chr3R	2393042	2393062	diver2	233	4783	7	20	'4-3	58.25	0.0	7.0	intergenic	not near genes	chr3R_7_2390001	chr3R_2390001	0.57	RAL-712
236	chr3R	3379580	3379610	pogo	21	2068	4	30	'3-1	74.67	2.3	1.2	intergenic	not near genes	chr3R_4_3375001	chr3R_3375001	0.75	RAL-712
237	chr3R	4873775	4873851	roo	406	8666	21	76	'14-7	63.96	3.6	4.6	intergenic	not near genes	chr3R_21_4870001	chr3R_4870001	0.67	RAL-712
238	chr3R	5984914	5984948	F-element	4585	4619	6	34	'3-3	64.67	3.7	1.3	intergenic	not near genes	chr3R_6_5980001	chr3R_5980001	0.50	RAL-712
239	chr3R	5997362	5997444	flea	4755	5013	13	82	'8-5	65.35	4.1	2.5	intergenic	not near genes	chr3R_13_5995001	chr3R_5995001	0.62	RAL-712
240	chr3R	6012985	6013052	copia	245	4872	8	67	'3-5	61.84	4.3	1.5	intergenic	not near genes	chr3R_8_6010001	chr3R_6010001	0.38	RAL-712
241	chr3R	6474599	6474624	jockey	4557	4582	9	25	'6-3	61.70	5.9	1.3	intergenic	not near genes	chr3R_9_6470001	chr3R_6470001	0.67	RAL-712
242	chr3R	6740285	6740468	3S18	314	332	4	183	'1-3	58.67	0.8	2.2	intron	pb -	chr3R_4_6740001	chr3R_6740001	0.25	RAL-712
243	chr3R	6966484	6966506	pogo	27	7	7	22	'4-3	65.06	2.0	2.3	intron	Antp -	chr3R_7_6965001	chr3R_6965001	0.57	RAL-712
244	chr3R	7116385	7116460	pogo	2097	3	15	75	'8-7	63.65	4.1	2.9	intron,intron	Alh -,Mlp84B -	chr3R_15_7115001	chr3R_7115001	0.53	RAL-712
245	chr3R	7296802	7296866	hopper	1406	8	12	64	'8-4	61.60	4.0	2.4	intron	rn -	chr3R_12_7295001	chr3R_7295001	0.67	RAL-712
246	chr3R	7477456	7477480	BS	5016	4992	4	24	'1-3	67.00	4.1	0.8	intergenic	not near genes	chr3R_4_7475001	chr3R_7475001	0.25	RAL-712
247	chr3R	7513636	7513685	I-element	5337	6	6	49	'5-1	60.44	2.1	1.9	intron	alpha-Est8 -	chr3R_6_7510001	chr3R_7510001	0.83	RAL-712
248	chr3R	8621710	8621738	jockey	37	10	14	28	'4-10	56.70	4.4	2.6	intron	5-HT2B +	chr3R_14_8620001	chr3R_8620001	0.29	RAL-712
249	chr3R	8743195	8743263	hobo	2932	2	12	68	'4-8	64.09	9.1	1.2	intron	CG9801 -	chr3R_12_8740001	chr3R_8740001	0.33	RAL-712
250	chr3R	9106180	9106250	1360	3388	8	16	70	'6-10	67.96	5.5	2.5	intron	pum -	chr3R_16_9105001	chr3R_9105001	0.38	RAL-712
251	chr3R	9182171	9182231	roo	8665	9052	10	60	'8-2	69.27	4.0	2.0	intron	pum -	chr3R_10_9180001	chr3R_9180001	0.80	RAL-712
252	chr3R	9229919	9229991	S-element	2	1706	4	72	'2-2	64.08	0.5	2.7	intron,intron	pum -,CR45196 +	chr3R_4_9225001	chr3R_9225001	0.50	RAL-712
253	chr3R	9855867	9855895	Doc	10	36	6	28	'2-4	68.35	3.5	1.3	intron	Teh1 -	chr3R_6_9855001	chr3R_9855001	0.33	RAL-712
254	chr3R	9905251	9905267	Doc	32	16	5	16	'4-1	65.07	3.1	1.2	intron	Glut4EF +	chr3R_5_9905001	chr3R_9905001	0.80	RAL-712
255	chr3R	10078227	10078303	Tirant	5	8503	17	76	'7-10	64.51	2.4	5.0	intergenic	not near genes	chr3R_17_10075001	chr3R_10075001	0.41	RAL-712
256	chr3R	10434525	10434541	Juan	4206	4190	5	16	'2-3	64.80	4.2	1.0	intergenic	Cyp12e1 +	chr3R_5_10430001	chr3R_10430001	0.40	RAL-712
257	chr3R	10437243	10437263	jockey	15	35	6	20	'3-3	61.45	4.5	1.1	intergenic	not near genes	chr3R_6_10435001	chr3R_10435001	0.50	RAL-712
258	chr3R	10515710	10515785	hopper	1414	5	12	75	'4-8	62.43	2.9	3.1	intron	hth -	chr3R_12_10515001	chr3R_10515001	0.33	RAL-712
259	chr3R	10669280	10669363	roo	410	8663	14	83	'6-8	68.67	3.8	2.9	intergenic	not near genes	chr3R_14_10665001	chr3R_10665001	0.43	RAL-712
260	chr3R	11163025	11163087	mdg1	7459	19	12	62	'10-2	63.82	2.8	3.2	exon	CG4757 +	chr3R_12_11160001	chr3R_11160001	0.83	RAL-712
261	chr3R	11370764	11370841	hopper	1413	1413	16	77	'8-8	67.40	4.5	2.9	intron	pros +	chr3R_16_11370001	chr3R_11370001	0.50	RAL-712
262	chr3R	11526777	11526835	pogo	2100	25	8	58	'3-5	69.08	1.7	3.0	intergenic	not near genes	chr3R_8_11525001	chr3R_11525001	0.38	RAL-712
263	chr3R	11544137	11544215	hobo	2	2709	20	78	'9-11	62.97	6.4	2.7	intergenic	not near genes	chr3R_20_11540001	chr3R_11540001	0.45	RAL-712
264	chr3R	11553657	11553710	hopper	1411	22	10	53	'6-4	66.00	3.6	2.2	intergenic	CG14708 +	chr3R_10_11550001	chr3R_11550001	0.60	RAL-712
265	chr3R	11926168	11926249	blood	377	7011	14	81	'8-6	61.11	3.0	3.5	intron	Cad87A -	chr3R_14_11925001	chr3R_11925001	0.57	RAL-712
266	chr3R	12166393	12166460	hopper	1405	1411	11	67	'3-8	60.16	3.5	2.4	intergenic	Cpn -	chr3R_11_12165001	chr3R_12165001	0.27	RAL-712
267	chr3R	12794828	12794855	I-element	28	1	9	27	'4-5	57.58	5.7	1.3	intergenic	not near genes	chr3R_9_12790001	chr3R_12790001	0.44	RAL-712
268	chr3R	12949440	12949511	hobo	5	2937	16	71	'9-7	62.16	4.1	3.1	intergenic	not near genes	chr3R_16_12945001	chr3R_12945001	0.56	RAL-712
269	chr3R	13119018	13119060	jockey	4679	4979	6	42	'3-3	60.00	4.6	1.1	intron	timeout +	chr3R_6_13115001	chr3R_13115001	0.50	RAL-712
270	chr3R	13508881	13508957	mdg1	7039	417	8	76	'2-6	65.33	1.4	3.3	intergenic	not near genes	chr3R_8_13505001	chr3R_13505001	0.25	RAL-712
271	chr3R	13543903	13543949	1360	32	3388	12	46	'8-4	69.77	1.5	4.8	intergenic	CG31337 -	chr3R_12_13540001	chr3R_13540001	0.67	RAL-712
272	chr3R	13566708	13566768	412	14	7543	9	60	'6-3	59.95	3.4	2.0	intergenic	not near genes	chr3R_9_13565001	chr3R_13565001	0.67	RAL-712
273	chr3R	13620988	13621067	diver	1	224	10	79	'4-6	65.20	1.8	3.6	intergenic	not near genes	chr3R_10_13620001	chr3R_13620001	0.40	RAL-712
274	chr3R	13739093	13739168	blood	3	7386	5	75	'1-4	53.60	2.6	1.4	intron	CG34383 +	chr3R_5_13735001	chr3R_13735001	0.20	RAL-712
275	chr3R	13851412	13851489	pogo	6	2100	15	77	'8-7	64.38	3.0	3.8	intergenic	not near genes	chr3R_15_13850001	chr3R_13850001	0.53	RAL-712
276	chr3R	14049342	14049413	transib2	1	2815	7	71	'4-3	65.33	3.8	1.5	intergenic	not near genes	chr3R_7_14045001	chr3R_14045001	0.57	RAL-712
277	chr3R	14147270	14147323	blood	7040	379	6	53	'4-2	67.21	1.6	2.3	intergenic	not near genes	chr3R_6_14145001	chr3R_14145001	0.67	RAL-712
278	chr3R	14281192	14281270	roo	5	411	14	78	'8-6	70.52	4.8	2.4	intron	trx -	chr3R_14_14280001	chr3R_14280001	0.57	RAL-712
279	chr3R	14338524	14338591	roo	398	8667	11	67	'3-8	64.25	1.2	5.0	intron	NK7.1 -	chr3R_11_14335001	chr3R_14335001	0.27	RAL-712
280	chr3R	14688242	14688322	pogo	2098	1	7	80	'3-4	54.96	1.0	3.5	intron	Meltrin -	chr3R_7_14685001	chr3R_14685001	0.43	RAL-712
281	chr3R	15542750	15542809	Juan	4209	4026	12	59	'4-8	66.74	2.7	3.2	3` UTR	CG6045 -	chr3R_12_15540001	chr3R_15540001	0.33	RAL-712
282	chr3R	16229934	16230003	S-element	1711	1707	10	69	'5-5	65.68	2.1	3.2	intron	tara +	chr3R_10_16225001	chr3R_16225001	0.50	RAL-712
283	chr3R	16322348	16322365	1360	3386	19	7	17	'4-3	62.72	9.8	0.6	intron	Sulf1 -	chr3R_7_16320001	chr3R_16320001	0.57	RAL-712
284	chr3R	17063718	17063793	diver	225	5894	8	75	'5-3	64.17	3.2	1.9	intron	Dad +	chr3R_8_17060001	chr3R_17060001	0.62	RAL-712
285	chr3R	17243128	17243154	hopper	3	32	5	26	'3-2	62.63	4.3	0.9	intron	beat-IIb -	chr3R_5_17240001	chr3R_17240001	0.60	RAL-712
286	chr3R	17733256	17733273	INE-1	566	547	4	17	'1-3	67.61	7.5	0.5	intergenic	Lgr1 +,CG14321 +	chr3R_4_17730001	chr3R_17730001	0.25	RAL-712
287	chr3R	17944031	17944098	P-element	7	4	17	67	'9-8	47.32	3.5	3.8	intron	cpo +	chr3R_17_17940001	chr3R_17940001	0.53	RAL-712
288	chr3R	17992097	17992120	McClintock	5974	5951	10	23	'4-6	64.93	2.6	2.8	intron	cpo +	chr3R_10_17990001	chr3R_17990001	0.40	RAL-712
289	chr3R	18264598	18264656	flea	4757	4991	14	58	'13-1	60.35	1.9	4.8	intergenic	not near genes	chr3R_14_18260001	chr3R_18260001	0.93	RAL-712
290	chr3R	18272119	18272142	1360	1	24	7	23	'2-5	64.95	7.8	0.8	exon	Vps39 -	chr3R_7_18270001	chr3R_18270001	0.29	RAL-712
291	chr3R	18342708	18342787	roo	8667	410	9	79	'2-7	66.03	2.9	2.3	intron	CG15803 -	chr3R_9_18340001	chr3R_18340001	0.22	RAL-712
292	chr3R	18344858	18344913	HMS-Beagle	233	14	8	55	'1-7	62.40	2.7	2.2	intron	CG15803 -	chr3R_8_18340001	chr3R_18340001	0.12	RAL-712
293	chr3R	18809736	18809804	Tabor	7319	6847	10	68	'5-5	60.53	1.8	3.6	intron	CG18208 -	chr3R_10_18805001	chr3R_18805001	0.50	RAL-712
294	chr3R	18831140	18831226	mdg3	5250	249	17	86	'14-3	64.44	2.9	4.4	intron	CG18208 -	chr3R_17_18830001	chr3R_18830001	0.82	RAL-712
295	chr3R	18917829	18917858	S2	1683	1712	6	29	'3-3	77.51	0.9	3.2	intron	Xrp1 +	chr3R_6_18915001	chr3R_18915001	0.50	RAL-712
296	chr3R	19390465	19390546	HMS-Beagle	247	6798	17	81	'8-9	63.27	4.2	3.3	intron,exon	Ino80 -,CG18493 +	chr3R_17_19390001	chr3R_19390001	0.47	RAL-712
297	chr3R	19643203	19643279	Max-element	5	302	12	76	'5-7	61.67	5.6	1.8	3` UTR	Vha13 -	chr3R_12_19640001	chr3R_19640001	0.42	RAL-712
298	chr3R	19650438	19650497	P-element	2872	4	16	59	'9-7	44.11	7.3	1.9	exon	CG31220 +	chr3R_16_19650001	chr3R_19650001	0.56	RAL-712
299	chr3R	20125015	20125042	jockey	35	8	9	27	'5-4	58.31	3.9	1.8	intergenic	not near genes	chr3R_9_20125001	chr3R_20125001	0.56	RAL-712
300	chr3R	20151383	20151464	copia	255	4868	10	81	'5-5	63.29	7.4	1.2	intergenic	not near genes	chr3R_10_20150001	chr3R_20150001	0.50	RAL-712
301	chr3R	20239614	20239688	flea	5007	4756	14	74	'2-12	66.56	3.4	3.2	intron	Nlg4 +	chr3R_14_20235001	chr3R_20235001	0.14	RAL-712
302	chr3R	20376505	20376568	FB	12	1	8	63	'5-3	63.72	2.4	2.4	intergenic	not near genes	chr3R_8_20375001	chr3R_20375001	0.62	RAL-712
303	chr3R	21092898	21092945	mdg1	7458	7071	9	47	'4-5	69.92	4.5	1.6	intron,intron	RhoGAP93B -,CR44178 +	chr3R_9_21090001	chr3R_21090001	0.44	RAL-712
304	chr3R	21271190	21271268	pogo	2095	4	17	78	'8-9	68.78	3.3	4.0	3` UTR,3` UTR	CG5919 +,CG3308 -	chr3R_17_21270001	chr3R_21270001	0.47	RAL-712
305	chr3R	21600877	21600913	roo	8689	9055	7	36	'2-5	70.51	5.6	1.1	intron	InR -	chr3R_7_21600001	chr3R_21600001	0.29	RAL-712
306	chr3R	21701636	21701701	1731	4319	312	7	65	'1-6	61.84	2.9	1.8	intron	CG31176 -	chr3R_7_21700001	chr3R_21700001	0.14	RAL-712
307	chr3R	21894146	21894229	roo	8664	411	11	83	'9-2	67.24	4.1	2.2	intron	CG6678 +	chr3R_11_21890001	chr3R_21890001	0.82	RAL-712
308	chr3R	22220060	22220133	mdg1	415	2	6	73	'5-1	68.44	1.6	2.3	intron	SKIP +	chr3R_6_22220001	chr3R_22220001	0.83	RAL-712
309	chr3R	22753220	22753296	copia	254	3	9	76	'1-8	64.80	3.5	2.0	intron,intron	CG7029 +,Usp12-46 +	chr3R_9_22750001	chr3R_22750001	0.11	RAL-712
310	chr3R	22872489	22872565	hobo	1	2938	16	76	'10-6	67.83	5.5	2.5	intergenic	not near genes	chr3R_16_22870001	chr3R_22870001	0.62	RAL-712
311	chr3R	23457389	23457413	I-element	9	33	9	24	'5-4	62.02	12.1	0.7	intron	CG4374 -	chr3R_9_23455001	chr3R_23455001	0.56	RAL-712
312	chr3R	23576925	23576990	opus	495	13	17	65	'13-4	68.21	4.8	2.9	intron	beat-IV +	chr3R_17_23575001	chr3R_23575001	0.76	RAL-712
313	chr3R	23724096	23724175	Transpac	311	4921	20	79	'12-8	68.13	4.1	3.9	intron	CG10365 +	chr3R_20_23720001	chr3R_23720001	0.60	RAL-712
314	chr3R	23904851	23904923	roo	402	8666	15	72	'7-8	64.92	2.8	3.9	intron	sba -	chr3R_15_23900001	chr3R_23900001	0.47	RAL-712
315	chr3R	23943077	23943141	P-element	5	6	9	64	'5-4	53.32	3.3	2.1	5` UTR	Gdh -	chr3R_9_23940001	chr3R_23940001	0.56	RAL-712
316	chr3R	24002626	24002658	roo	9041	409	7	32	'4-3	67.33	4.4	1.3	intron	KrT95D -	chr3R_7_24000001	chr3R_24000001	0.57	RAL-712
317	chr3R	24073803	24073858	Stalker4	6966	395	10	55	'6-4	62.01	3.3	2.3	intron	4EHP -	chr3R_10_24070001	chr3R_24070001	0.60	RAL-712
318	chr3R	24084768	24084830	roo	8682	410	5	62	'2-3	62.83	3.9	1.0	intron	4EHP -	chr3R_5_24080001	chr3R_24080001	0.40	RAL-712
319	chr3R	24414372	24414402	roo	408	9042	10	30	'6-4	63.45	4.5	1.8	intron	nAChRalpha1 -	chr3R_10_24410001	chr3R_24410001	0.60	RAL-712
320	chr3R	24811647	24811693	FB	24	6	12	46	'6-6	64.84	3.0	3.0	intron	CG5807 -	chr3R_12_24810001	chr3R_24810001	0.50	RAL-712
321	chr3R	25976165	25976229	roo	8664	9055	18	64	'11-7	69.65	5.0	3.0	intron	CG42261 +	chr3R_18_25975001	chr3R_25975001	0.61	RAL-712
322	chr3R	26159426	26159483	mdg1	400	7040	11	57	'5-6	63.83	2.8	2.9	intergenic	not near genes	chr3R_11_26155001	chr3R_26155001	0.45	RAL-712
323	chr3R	26300537	26300617	springer	7518	7136	13	80	'5-8	68.00	3.1	3.2	intergenic	not near genes	chr3R_13_26300001	chr3R_26300001	0.38	RAL-712
324	chr3R	26314873	26314944	copia	5	251	10	71	'5-5	61.44	3.8	2.1	intergenic	not near genes	chr3R_10_26310001	chr3R_26310001	0.50	RAL-712
325	chr3R	26465748	26465814	roo	393	8663	13	66	'4-9	64.16	2.7	3.5	intron	CG5455 +	chr3R_13_26465001	chr3R_26465001	0.31	RAL-712
326	chr3R	26581794	26581863	hopper	9	1412	5	69	'2-3	66.16	1.8	1.8	intron	scrib +	chr3R_5_26580001	chr3R_26580001	0.40	RAL-712
327	chr3R	26733209	26733240	jockey	6	35	12	31	'5-7	62.91	6.7	1.6	intergenic	not near genes	chr3R_12_26730001	chr3R_26730001	0.42	RAL-712
328	chr3R	26769162	26769184	jockey	4760	4784	5	22	'1-4	59.02	5.7	0.7	5` UTR	CR45563 +	chr3R_5_26765001	chr3R_26765001	0.20	RAL-712
329	chr3R	26769985	26770053	mdg1	7048	7456	9	68	'4-5	63.71	1.3	3.9	intergenic	CR45563 +	chr3R_9_26765001	chr3R_26765001	0.44	RAL-712
330	chr3R	26828722	26828801	Burdock	254	6138	6	79	'3-3	63.56	2.5	1.7	intron	Tl +	chr3R_6_26825001	chr3R_26825001	0.50	RAL-712
331	chr3R	26846583	26846657	hobo	2937	2	12	74	'6-6	63.30	3.6	2.6	intron	Lerp -	chr3R_12_26845001	chr3R_26845001	0.50	RAL-712
332	chr3R	26968404	26968453	FB	26	1	7	49	'3-4	63.43	1.0	3.5	intron	CG5521 +	chr3R_7_26965001	chr3R_26965001	0.43	RAL-712
333	chr3R	27076867	27076946	flea	257	4761	7	79	'6-1	68.76	3.2	1.7	intron	CG14257 +	chr3R_7_27075001	chr3R_27075001	0.86	RAL-712
334	chr3R	27116729	27116794	P-element	5	2879	11	65	'5-6	48.46	3.4	2.5	intergenic	CG5880 +,CG6066 -	chr3R_11_27115001	chr3R_27115001	0.45	RAL-712
335	chr3R	27402597	27402614	jockey	4971	4988	5	17	'2-3	57.20	2.2	1.6	intron	side -	chr3R_5_27400001	chr3R_27400001	0.40	RAL-712
336	chr3R	27412313	27412394	roo	8661	9069	24	81	'13-11	67.54	4.2	4.6	intron	side -	chr3R_24_27410001	chr3R_27410001	0.54	RAL-712
337	chr3R	27472829	27472857	Juan	4187	17	4	28	'2-2	65.39	5.0	0.7	intergenic	not near genes	chr3R_4_27470001	chr3R_27470001	0.50	RAL-712
338	chr3R	27535056	27535123	mdg1	7447	2	8	67	'2-6	66.33	3.8	1.7	intergenic	not near genes	chr3R_8_27535001	chr3R_27535001	0.25	RAL-712
339	chr3R	27558575	27558630	P-element	14	2878	12	55	'4-8	43.13	3.1	2.9	5` UTR	Klp98A -	chr3R_12_27555001	chr3R_27555001	0.33	RAL-712
340	chr3R	27854289	27854366	Quasimodo	7364	2	7	77	'2-5	71.58	2.2	2.2	intron	CG34353 -	chr3R_7_27850001	chr3R_27850001	0.29	RAL-712
341	chr3R	27966532	27966547	Juan	4053	4038	7	15	'4-3	58.29	5.1	1.1	intron	CG4849 +	chr3R_7_27965001	chr3R_27965001	0.57	RAL-712
342	chr3R	27992476	27992544	mdg1	7455	7047	9	68	'7-2	63.26	1.5	3.6	intergenic	not near genes	chr3R_9_27990001	chr3R_27990001	0.78	RAL-712
343	chr3R	28289390	28289411	opus	7	7031	8	21	'3-5	65.90	3.8	1.7	intergenic	not near genes	chr3R_8_28285001	chr3R_28285001	0.38	RAL-712
344	chr3R	28387029	28387100	roo	400	8666	9	71	'5-4	67.47	1.6	3.5	intergenic	not near genes	chr3R_9_28385001	chr3R_28385001	0.56	RAL-712
345	chr3R	28804946	28804968	jockey	4673	4695	4	22	'3-1	55.67	4.7	0.7	intergenic	not near genes	chr3R_4_28800001	chr3R_28800001	0.75	RAL-712
346	chr3R	29293483	29293539	Ivk	7	5375	6	56	'3-3	66.47	3.2	1.4	intergenic	CG14506 -	chr3R_6_29290001	chr3R_29290001	0.50	RAL-712
347	chr3R	29354112	29354150	hobo	15	2915	10	38	'6-4	65.28	3.9	2.0	intergenic	not near genes	chr3R_10_29350001	chr3R_29350001	0.60	RAL-712
348	chr3R	29475709	29475757	hobo	7	2930	8	48	'7-1	55.38	2.5	2.3	intron	Ptp99A +	chr3R_8_29475001	chr3R_29475001	0.88	RAL-712
349	chr3R	29926708	29926769	opus	21	498	10	61	'3-7	68.08	2.7	2.7	intergenic	not near genes	chr3R_10_29925001	chr3R_29925001	0.30	RAL-712
350	chr3R	29952694	29952779	invader4	2758	322	10	85	'9-1	59.33	4.4	1.9	intron	TkR99D -	chr3R_10_29950001	chr3R_29950001	0.90	RAL-712
351	chr3R	30144360	30144434	flea	4761	253	10	74	'3-7	58.58	0.3	7.7	intron	AdoR -	chr3R_10_30140001	chr3R_30140001	0.30	RAL-712
352	chr3R	30245359	30245437	roo	8667	409	18	78	'8-10	66.30	2.7	4.9	intron	CG9733 -	chr3R_18_30245001	chr3R_30245001	0.44	RAL-712
353	chr3R	30571651	30571732	Burdock	253	6135	10	81	'4-6	68.00	3.2	2.4	intron	tmod +	chr3R_10_30570001	chr3R_30570001	0.40	RAL-712
354	chr3R	30958465	30958550	Max-element	157	302	13	85	'11-2	64.14	2.2	4.1	intergenic	not near genes	chr3R_13_30955001	chr3R_30955001	0.85	RAL-712
355	chr3R	31159631	31159708	hobo	1	2710	17	77	'10-7	63.01	2.7	4.6	intron,intron	Gycbeta100B +,stops -	chr3R_17_31155001	chr3R_31155001	0.59	RAL-712
356	chr3R	31196699	31196729	jockey	36	6	10	30	'3-7	63.52	3.4	2.3	intergenic	CG1544 +	chr3R_10_31195001	chr3R_31195001	0.30	RAL-712
357	chr3R	31605443	31605524	Tirant	4	400	17	81	'5-12	66.63	3.0	4.2	intron	CycG -	chr3R_17_31605001	chr3R_31605001	0.29	RAL-712
358	chr3R	31815957	31816007	gypsy	431	6988	7	50	'3-4	69.91	3.7	1.5	intron	RhoGAP100F +	chr3R_7_31815001	chr3R_31815001	0.43	RAL-712
359	chrX	292436	292457	G3	4557	4536	4	21	'1-3	63.39	3.1	1.0	intron,intron	CG3777 +,CG13375 -	chrX_4_290001	chrX_290001	0.25	RAL-712
360	chrX	544356	544432	roo	404	8663	18	76	'7-11	65.89	3.3	4.2	intron	Appl +	chrX_18_540001	chrX_540001	0.39	RAL-712
361	chrX	670675	670699	jockey	10	34	6	24	'4-2	62.04	3.2	1.4	intergenic	not near genes	chrX_6_670001	chrX_670001	0.67	RAL-712
362	chrX	771922	771989	1360	7	5	20	67	'3-17	67.10	4.8	3.4	intron	fz3 +	chrX_20_770001	chrX_770001	0.15	RAL-712
363	chrX	1019065	1019142	hopper	1414	1412	6	77	'4-2	65.70	3.6	1.3	intron,intron	su(w[a]) +,CG11638 -	chrX_6_1015001	chrX_1015001	0.67	RAL-712
364	chrX	1288910	1288927	jockey	4980	4963	5	17	'3-2	58.40	6.0	0.7	3` UTR	CG32812 +	chrX_5_1285001	chrX_1285001	0.60	RAL-712
365	chrX	2961139	2961206	3S18	5777	340	6	67	'4-2	66.79	3.3	1.4	intron,intron	kirre +,rst -	chrX_6_2960001	chrX_2960001	0.67	RAL-712
366	chrX	3274888	3274949	roo	15	9067	8	61	'3-5	65.87	2.9	2.1	intron	dnc +	chrX_8_3270001	chrX_3270001	0.38	RAL-712
367	chrX	3841641	3841665	jockey	14	32	4	24	'1-3	67.69	4.1	0.8	intron	ec +	chrX_4_3840001	chrX_3840001	0.25	RAL-712
368	chrX	4216067	4216083	hopper	4	1395	7	16	'5-2	61.63	4.6	1.2	intergenic	not near genes	chrX_7_4215001	chrX_4215001	0.71	RAL-712
369	chrX	4267233	4267296	297	16	391	6	63	'2-4	68.40	3.5	1.3	intergenic	not near genes	chrX_6_4265001	chrX_4265001	0.33	RAL-712
370	chrX	4297417	4297502	rover	6950	347	13	85	'8-5	70.53	2.2	4.1	intergenic	not near genes	chrX_13_4295001	chrX_4295001	0.62	RAL-712
371	chrX	6041293	6041319	jockey	4548	4523	7	26	'4-3	65.29	4.6	1.2	intron	CG5937 +	chrX_7_6040001	chrX_6040001	0.57	RAL-712
372	chrX	6212421	6212489	rover	7292	6957	13	68	'7-6	64.76	3.3	3.0	intergenic	not near genes	chrX_13_6210001	chrX_6210001	0.54	RAL-712
373	chrX	6698694	6698769	pogo	6	2099	8	75	'2-6	67.69	1.5	3.2	intergenic	CG14440 -	chrX_8_6695001	chrX_6695001	0.25	RAL-712
374	chrX	6755735	6755757	transib4	157	179	6	22	'4-2	76.89	4.7	1.1	3` UTR	CG14439 +	chrX_6_6755001	chrX_6755001	0.67	RAL-712
375	chrX	7506059	7506144	roo	8661	410	13	85	'4-9	66.36	2.6	3.6	intergenic	not near genes	chrX_13_7505001	chrX_7505001	0.31	RAL-712
376	chrX	7835319	7835397	copia	254	4870	11	78	'5-6	61.71	3.6	2.4	intron	CG1402 +	chrX_11_7835001	chrX_7835001	0.45	RAL-712
377	chrX	8384089	8384171	roo	411	8665	8	82	'5-3	65.54	1.4	3.3	intergenic	not near genes	chrX_8_8380001	chrX_8380001	0.62	RAL-712
378	chrX	8659827	8659896	3S18	338	5772	6	69	'2-4	60.84	2.6	1.7	intergenic	not near genes	chrX_6_8655001	chrX_8655001	0.33	RAL-712
379	chrX	8739734	8739801	Stalker2	7639	1	11	67	'4-7	61.73	2.0	3.7	intergenic	not near genes	chrX_11_8735001	chrX_8735001	0.36	RAL-712
380	chrX	8894044	8894111	P-element	2882	6	14	67	'7-7	46.41	1.8	5.0	intron	Moe -	chrX_14_8890001	chrX_8890001	0.50	RAL-712
381	chrX	9525690	9525765	copia	258	4877	10	75	'5-5	63.79	1.4	4.2	intron	CG32700 -	chrX_10_9525001	chrX_9525001	0.50	RAL-712
382	chrX	9868697	9868713	roo	8663	8679	4	16	'2-2	64.67	1.9	1.4	intergenic	CG45060 -	chrX_4_9865001	chrX_9865001	0.50	RAL-712
383	chrX	10119609	10119626	FB	26	9	6	17	'4-2	60.58	0.8	3.3	intron,intron	RhoU +,CR44894 -	chrX_6_10115001	chrX_10115001	0.67	RAL-712
384	chrX	10176257	10176340	roo	409	8664	5	83	'2-3	64.54	1.4	2.1	intron,intron	CR44894 -,CG43902 +	chrX_5_10175001	chrX_10175001	0.40	RAL-712
385	chrX	10425731	10425787	297	6592	379	4	56	'1-3	77.96	2.1	1.3	intron	CG32683 -	chrX_4_10425001	chrX_10425001	0.25	RAL-712
386	chrX	10651756	10651783	hobo	33	6	5	27	'4-1	68.00	1.5	2.0	intron	X11Lbeta +	chrX_5_10650001	chrX_10650001	0.80	RAL-712
387	chrX	10682909	10682961	pogo	22	2091	4	52	'1-3	68.26	2.2	1.2	intron	X11Lbeta +	chrX_4_10680001	chrX_10680001	0.25	RAL-712
388	chrX	11011075	11011128	roo	8691	408	5	53	'1-4	65.87	1.6	1.9	intron	CG42339 -	chrX_5_11010001	chrX_11010001	0.20	RAL-712
389	chrX	11641877	11641954	mdg3	247	5255	17	77	'9-8	64.21	0.6	10.6	intron	Ptp10D +	chrX_17_11640001	chrX_11640001	0.53	RAL-712
390	chrX	12257285	12257366	copia	4869	256	12	81	'8-4	68.60	3.3	2.8	intron	Ten-a +	chrX_12_12255001	chrX_12255001	0.67	RAL-712
391	chrX	12664411	12664478	hobo	7	2935	9	67	'5-4	61.08	3.3	2.1	intron	Tis11 +	chrX_9_12660001	chrX_12660001	0.56	RAL-712
392	chrX	13574205	13574289	Tirant	8106	400	11	84	'10-1	65.07	2.1	3.5	intron	Tango13 +	chrX_11_13570001	chrX_13570001	0.91	RAL-712
393	chrX	13669647	13669709	P-element	6	2883	17	62	'6-11	45.23	3.5	3.8	intergenic	CG15760 +,CG11164 +	chrX_17_13665001	chrX_13665001	0.35	RAL-712
394	chrX	14345962	14346014	hobo	2927	12	10	52	'4-6	58.77	2.8	2.6	intron	dpr8 +	chrX_10_14345001	chrX_14345001	0.40	RAL-712
395	chrX	14665567	14665632	pogo	6	2088	7	65	'3-4	58.20	2.4	2.1	intergenic	not near genes	chrX_7_14665001	chrX_14665001	0.43	RAL-712
396	chrX	15509195	15509234	roo	9039	8673	8	39	'3-5	65.94	2.9	2.1	intron	Gmap +	chrX_8_15505001	chrX_15505001	0.38	RAL-712
397	chrX	15841153	15841180	INE-1	140	167	8	27	'3-5	59.85	1.8	2.9	3` UTR	CG8565 +	chrX_8_15840001	chrX_15840001	0.38	RAL-712
398	chrX	16090791	16090851	P-element	2875	2881	14	60	'5-9	45.97	2.7	3.8	intron	Tob -	chrX_14_16090001	chrX_16090001	0.36	RAL-712
399	chrX	16809263	16809282	HMS-Beagle	6821	6802	5	19	'2-3	61.33	1.4	2.1	intergenic	CR44053 -	chrX_5_16805001	chrX_16805001	0.40	RAL-712
400	chrX	17558132	17558211	HMS-Beagle	6794	242	9	79	'5-4	66.92	3.5	2.0	intron	CG43658 -	chrX_9_17555001	chrX_17555001	0.56	RAL-712
401	chrX	17566361	17566389	jockey	35	6	9	28	'5-4	64.16	3.8	1.9	intergenic	ppk23 -	chrX_9_17565001	chrX_17565001	0.56	RAL-712
402	chrX	18193726	18193751	hopper	1408	1385	7	25	'4-3	68.20	4.7	1.2	intron	Frq2 +	chrX_7_18190001	chrX_18190001	0.57	RAL-712
403	chrX	18239063	18239092	jockey	4558	4587	4	29	'3-1	64.67	4.3	0.8	intergenic	not near genes	chrX_4_18235001	chrX_18235001	0.75	RAL-712
404	chrX	18397587	18397970	pogo	8	5	17	383	'7-10	64.14	1.7	6.3	intron	CG32549 -	chrX_17_18395001	chrX_18395001	0.41	RAL-712
405	chrX	18632885	18632960	mdg3	5491	5251	20	75	'6-14	64.42	4.3	3.8	intron	wgn -	chrX_20_18630001	chrX_18630001	0.30	RAL-712
406	chrX	18753600	18753660	mdg1	7453	7053	7	60	'5-2	63.43	0.7	4.1	intergenic	not near genes	chrX_7_18750001	chrX_18750001	0.71	RAL-712
407	chrX	19421522	19421602	HMS-Beagle	246	6798	20	80	'12-8	64.30	2.6	5.6	intron	kek5 +	chrX_20_19420001	chrX_19420001	0.60	RAL-712
408	chrX	19887081	19887151	P-element	5	2886	16	70	'11-5	46.78	3.5	3.6	intron,exon	Hers +,amn -	chrX_16_19885001	chrX_19885001	0.69	RAL-712
409	chrX	20081062	20081106	mdg3	219	5262	4	44	'1-3	63.77	1.8	1.4	intergenic	not near genes	chrX_4_20080001	chrX_20080001	0.25	RAL-712
410	chrX	20106324	20106346	hopper	1414	1392	5	22	'2-3	59.08	2.7	1.4	intergenic	not near genes	chrX_5_20105001	chrX_20105001	0.40	RAL-712
411	chrX	20852674	20852751	mdg3	5258	250	4	77	'1-3	69.95	1.8	1.4	intron	shakB -	chrX_4_20850001	chrX_20850001	0.25	RAL-712
412	chrX	20852780	20852847	17.6	481	4	5	67	'1-4	66.13	1.8	1.8	intron	shakB -	chrX_5_20850001	chrX_20850001	0.20	RAL-712
413	chrX	20860978	20861016	BS	5073	7	4	38	'1-3	58.87	0.5	2.7	intron	shakB -	chrX_4_20860001	chrX_20860001	0.25	RAL-712
414	chrX	20999537	20999568	BS	5072	9	5	31	'3-2	67.67	2.8	1.3	intergenic	not near genes	chrX_5_20995001	chrX_20995001	0.60	RAL-712
415	chrX	21131845	21131889	FB	12	21	4	44	'2-2	60.66	0.2	3.3	intron	CG34120 +	chrX_4_21130001	chrX_21130001	0.50	RAL-712
416	chrX	21399401	21399469	pogo	4	2090	8	68	'5-3	63.86	2.5	2.3	intergenic	not near genes	chrX_8_21395001	chrX_21395001	0.62	RAL-712
417	chrX	21401400	21401430	roo	408	9041	7	30	'4-3	65.27	1.7	2.6	intergenic	not near genes	chrX_7_21400001	chrX_21400001	0.57	RAL-712
418	chrX	21499253	21499319	Quasimodo	7	7358	6	66	'2-4	68.37	2.2	1.9	intron	CR45082 -	chrX_6_21495001	chrX_21495001	0.33	RAL-712
419	chrX	21582864	21582945	roo	8666	411	10	81	'6-4	64.15	2.3	3.0	intergenic	not near genes	chrX_10_21580001	chrX_21580001	0.60	RAL-712
420	chrX	21667905	21667930	gypsy2	29	5	5	25	'1-4	68.46	5.9	0.7	intergenic	not near genes	chrX_5_21665001	chrX_21665001	0.20	RAL-712
421	chrX	22719021	22719099	roo	8669	411	17	78	'9-8	70.06	5.0	2.8	intron	CR44997 +	chrX_17_22715001	chrX_22715001	0.53	RAL-712
422	chrX	22806728	22806750	Burdock	230	255	6	22	'3-3	62.05	2.0	2.0	3` UTR	CR45464 -	chrX_6_22805001	chrX_22805001	0.50	RAL-712
423	chrX	23009999	23010017	Stalker2	7266	7248	4	18	'3-1	57.08	4.4	0.7	exon	FucTC -	chrX_4_23005001	chrX_23005001	0.75	RAL-712
424	chrX	23065000	23065086	Burdock	6134	257	13	86	'6-7	68.92	3.0	3.2	intergenic	not near genes	chrX_13_23065001	chrX_23065001	0.46	RAL-712
425	chrY	864905	864954	accord	17	7368	4	49	'3-1	63.33	4.2	0.8	intergenic	not near genes	chrY_4_860001	chrY_860001	0.75	RAL-712
426	chrY	975839	975904	1360	3380	5	4	65	'2-2	64.28	71.1	0.1	intergenic	not near genes	chrY_4_975001	chrY_975001	0.50	RAL-712