SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47461	47492	chr2L	52565	52596	jockey	16	5105	3.5	4.0	3.8	3.3	5135	chr2L	47461	intron	Cda5 -	chr2L	50028	intron	Cda5 -	chr2L	52596	intron	Cda5 -	chr2L_16_50001	chr2L_50001	RAL-707
8	chr2L	347887	347911	chr2L	355386	355411	blood	10	7500	4.5	1.5	3.0	2.5	7524	chr2L	347887	3` UTR	Plc21C +	chr2L	351649	intron	Plc21C +	chr2L	355411	3` UTR	Plc21C +	chr2L_10_350001	chr2L_350001	RAL-707
13	chr2L	686926	686947	chr2L	695966	695987	roo	6	9040	2.5	3.5	3.0	1.5	9061	chr2L	686926	intron	ds -	chr2L	691456	intron	ds -	chr2L	695987	intron	ds -	chr2L_6_690001	chr2L_690001	RAL-707
15	chr2L	770464	770494	chr2L	772245	772275	Bari1	12	1781	2.0	3.5	2.8	3.2	1811	chr2L	770464	intergenic	not near genes	chr2L	771370	intergenic	not near genes	chr2L	772275	intergenic	CR44614 +	chr2L_12_770001	chr2L_770001	RAL-707
20	chr2L	1220131	1220158	chr2L	1227597	1227624	blood	5	7466	4.5	1.5	3.0	1.2	7493	chr2L	1220131	intron	CG42329 +	chr2L	1223878	intron	CG42329 +	chr2L	1227624	intron	CG42329 +	chr2L_5_1220001	chr2L_1220001	RAL-707
24	chr2L	1570689	1570717	chr2L	1573561	1573589	F-element	5	2872	3.0	2.5	2.8	1.3	2900	chr2L	1570689	intron	haf +	chr2L	1572139	intron	haf +	chr2L	1573589	intron	haf +	chr2L_5_1570001	chr2L_1570001	RAL-707
26	chr2L	1678957	1679004	chr2L	1686440	1686469	blood	5	7472	0.0	4.0	2.0	1.7	7512	chr2L	1678957	intron	chinmo +	chr2L	1682713	intron	chinmo +	chr2L	1686469	intron	chinmo +	chr2L_5_1680001	chr2L_1680001	RAL-707
28	chr2L	1711357	1711389	chr2L	1711681	1711713	mdg3	13	324	2.0	2.5	2.2	4.1	356	chr2L	1711357	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711535	3` UTR	frtz -	chr2L	1711713	3` UTR	frtz -	chr2L_13_1710001	chr2L_1710001	RAL-707
35	chr2L	2100384	2100404	chr2L	2109535	2109555	roo	8	9151	2.5	2.0	2.2	2.5	9171	chr2L	2100384	intron	dpr3 -	chr2L	2104970	intron	dpr3 -	chr2L	2109555	intron	dpr3 -	chr2L_8_2100001	chr2L_2100001	RAL-707
36	chr2L	2112121	2112144	chr2L	2119783	2119805	opus	7	7662	3.0	3.5	3.2	1.7	7684	chr2L	2112121	intergenic	not near genes	chr2L	2115963	intergenic	not near genes	chr2L	2119805	intergenic	not near genes	chr2L_7_2115001	chr2L_2115001	RAL-707
38	chr2L	2294042	2294075	chr2L	2299247	2299280	copia	6	5205	0.0	3.5	1.8	2.1	5238	chr2L	2294042	intergenic	not near genes	chr2L	2296661	intergenic	not near genes	chr2L	2299280	intergenic	not near genes	chr2L_6_2295001	chr2L_2295001	RAL-707
47	chr2L	2661201	2661233	chr2L	2663039	2663069	I-element	8	1837	0.5	2.0	1.2	3.6	1868	chr2L	2661201	intergenic	not near genes	chr2L	2662135	intergenic	not near genes	chr2L	2663069	intergenic	not near genes	chr2L_8_2660001	chr2L_2660001	RAL-707
55	chr2L	3073019	3073029	chr2L	3078241	3078252	copia	6	5223	0.5	3.0	1.8	2.1	5233	chr2L	3073019	intron	toc -	chr2L	3075636	intron	toc -	chr2L	3078252	intron	toc -	chr2L_6_3075001	chr2L_3075001	RAL-707
59	chr2L	3202741	3202770	chr2L	3210170	3210198	mdg1	8	7429	0.5	3.5	2.0	2.7	7457	chr2L	3202741	intergenic	not near genes	chr2L	3206470	intergenic	not near genes	chr2L	3210198	intergenic	CR45336 +	chr2L_8_3205001	chr2L_3205001	RAL-707
61	chr2L	3251498	3251526	chr2L	3259063	3259091	springer	4	7565	2.0	4.5	3.2	1.0	7593	chr2L	3251498	intergenic	not near genes	chr2L	3255294	intergenic	not near genes	chr2L	3259091	intergenic	not near genes	chr2L_4_3255001	chr2L_3255001	RAL-707
64	chr2L	3388600	3388627	chr2L	3388841	3388868	pogo	5	241	3.0	2.0	2.5	1.4	268	chr2L	3388600	intergenic	CG42460 -	chr2L	3388734	intergenic	CG42460 -	chr2L	3388868	intergenic	CG42460 -,CR44791 +	chr2L_5_3385001	chr2L_3385001	RAL-707
76	chr2L	4601708	4601736	chr2L	4609149	4609177	mdg1	8	7441	3.5	3.0	3.2	1.9	7469	chr2L	4601708	intron	dp -	chr2L	4605442	intron	dp -	chr2L	4609177	intron	dp -	chr2L_8_4605001	chr2L_4605001	RAL-707
97	chr2L	5827716	5827737	chr2L	5836724	5836745	roo	6	9007	4.5	4.5	4.5	1.1	9029	chr2L	5827716	intron	TrissinR +	chr2L	5832230	intron	TrissinR +	chr2L	5836745	intron	TrissinR +	chr2L_6_5830001	chr2L_5830001	RAL-707
111	chr2L	6363151	6363178	chr2L	6366071	6366100	Burdock	5	2921	4.0	0.5	2.2	1.6	2949	chr2L	6363151	intergenic	not near genes	chr2L	6364626	intergenic	not near genes	chr2L	6366100	intergenic	not near genes	chr2L_5_6360001	chr2L_6360001	RAL-707
112	chr2L	6426856	6426888	chr2L	6445116	6445148	roo	11	18260	7.0	3.5	5.2	1.8	18292	chr2L	6426856	3` UTR	CG9527 -	chr2L	6436002	intron	CG9527 -	chr2L	6445148	exon	CG9527 -	chr2L_11_6435001	chr2L_6435001	RAL-707
123	chr2L	6876785	6876805	chr2L	6882976	6882996	diver	5	6191	5.0	6.0	5.5	0.8	6211	chr2L	6876785	intron	Nlg2 +	chr2L	6879890	intron	Nlg2 +	chr2L	6882996	intron	Nlg2 +	chr2L_5_6875001	chr2L_6875001	RAL-707
127	chr2L	7343336	7343354	chr2L	7350452	7350470	roo	4	7115	4.0	5.5	4.8	0.7	7134	chr2L	7343336	intron	Wnt6 +	chr2L	7346903	intron	Wnt6 +	chr2L	7350470	intron	Wnt6 +	chr2L_4_7345001	chr2L_7345001	RAL-707
137	chr2L	7959041	7959066	chr2L	7960452	7960477	pogo	5	1411	3.0	0.5	1.8	1.8	1436	chr2L	7959041	intron	Snoo -	chr2L	7959759	intron	Snoo -	chr2L	7960477	intron	Snoo -	chr2L_5_7955001	chr2L_7955001	RAL-707
138	chr2L	8018826	8018834	chr2L	8023610	8023618	Doc	6	4784	0.0	5.5	2.8	1.6	4792	chr2L	8018826	intron	Tg +	chr2L	8021222	intron	Tg +	chr2L	8023618	intron	Tg +	chr2L_6_8020001	chr2L_8020001	RAL-707
143	chr2L	8452418	8452447	chr2L	8461589	8461618	roo	5	9171	3.5	1.0	2.2	1.6	9200	chr2L	8452418	intron	fu12 -	chr2L	8457018	intron	fu12 -	chr2L	8461618	intron	fu12 -	chr2L_5_8455001	chr2L_8455001	RAL-707
144	chr2L	8723115	8723144	chr2L	8731492	8731521	Tirant	11	8377	1.5	2.5	2.0	3.7	8406	chr2L	8723115	intron	raw -	chr2L	8727318	intron	raw -	chr2L	8731521	intron	raw -	chr2L_11_8725001	chr2L_8725001	RAL-707
148	chr2L	9000279	9000311	chr2L	9007789	9007821	roo	11	7510	6.0	1.5	3.8	2.3	7542	chr2L	9000279	intergenic	Try29F +	chr2L	9004050	intergenic	not near genes	chr2L	9007821	intergenic	not near genes	chr2L_11_9000001	chr2L_9000001	RAL-707
159	chr2L	9393509	9393525	chr2L	9396476	9396492	jockey	7	2967	5.5	4.0	4.8	1.2	2983	chr2L	9393509	intron	Shawl -	chr2L	9395000	intron	Shawl -	chr2L	9396492	intron	Shawl -	chr2L_7_9395001	chr2L_9395001	RAL-707
168	chr2L	9973731	9973756	chr2L	9980850	9980875	HMS-Beagle	10	7119	4.5	4.0	4.2	1.9	7144	chr2L	9973731	intergenic	not near genes	chr2L	9977303	intergenic	not near genes	chr2L	9980875	intergenic	not near genes	chr2L_10_9975001	chr2L_9975001	RAL-707
174	chr2L	10156322	10156355	chr2L	10163792	10163825	blood	9	7470	2.0	4.0	3.0	2.2	7503	chr2L	10156322	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160074	intron	CG44153 -	chr2L	10163825	intron	CG44153 -	chr2L_9_10160001	chr2L_10160001	RAL-707
181	chr2L	10592841	10592875	chr2L	10600503	10600536	opus	9	7662	3.5	2.0	2.8	2.4	7695	chr2L	10592841	intron	Trim9 +	chr2L	10596688	intron	Trim9 +	chr2L	10600536	intron	Trim9 +	chr2L_9_10595001	chr2L_10595001	RAL-707
185	chr2L	10862846	10862873	chr2L	10864460	10864485	Rt1c	6	1614	3.5	4.0	3.8	1.2	1639	chr2L	10862846	3` UTR	CR43807 -	chr2L	10863666	intron	CR43807 -	chr2L	10864485	3` UTR	CR43807 -	chr2L_6_10860001	chr2L_10860001	RAL-707
188	chr2L	10946961	10946974	chr2L	10956165	10956189	roo	5	9213	5.5	5.5	5.5	0.8	9228	chr2L	10946961	intron	dpr2 -	chr2L	10951575	intron	dpr2 -	chr2L	10956189	intron	dpr2 -	chr2L_5_10950001	chr2L_10950001	RAL-707
195	chr2L	11540586	11540614	chr2L	11547988	11548016	Tabor	6	7402	2.5	3.5	3.0	1.5	7430	chr2L	11540586	intergenic	not near genes	chr2L	11544301	intergenic	not near genes	chr2L	11548016	intergenic	not near genes	chr2L_6_11540001	chr2L_11540001	RAL-707
196	chr2L	11563639	11563661	chr2L	11568843	11568864	copia	4	5204	3.5	3.5	3.5	0.9	5225	chr2L	11563639	intergenic	not near genes	chr2L	11566252	intergenic	not near genes	chr2L	11568864	intergenic	not near genes	chr2L_4_11565001	chr2L_11565001	RAL-707
197	chr2L	11614066	11614077	chr2L	11615560	11615572	hopper2	6	1493	1.0	2.0	1.5	2.4	1506	chr2L	11614066	intron	kek2 +	chr2L	11614819	intron	kek2 +	chr2L	11615572	intron	kek2 +	chr2L_6_11610001	chr2L_11610001	RAL-707
199	chr2L	11713507	11713538	chr2L	11720975	11721006	blood	4	7468	2.0	3.0	2.5	1.1	7499	chr2L	11713507	intergenic	not near genes	chr2L	11717256	intergenic	not near genes	chr2L	11721006	intergenic	CR44143 +	chr2L_4_11715001	chr2L_11715001	RAL-707
215	chr2L	12558320	12558346	chr2L	12565449	12565475	HMS-Beagle	7	7129	4.0	2.0	3.0	1.8	7155	chr2L	12558320	intergenic	not near genes	chr2L	12561898	intergenic	not near genes	chr2L	12565475	intergenic	not near genes	chr2L_7_12560001	chr2L_12560001	RAL-707
217	chr2L	12728921	12728940	chr2L	12729161	12729182	pogo	4	241	4.5	3.5	4.0	0.8	261	chr2L	12728921	intron	MRP +	chr2L	12729052	intron	MRP +	chr2L	12729182	intron	MRP +	chr2L_4_12725001	chr2L_12725001	RAL-707
218	chr2L	12731054	12731084	chr2L	12735821	12735851	F-element	8	4767	2.0	3.0	2.5	2.3	4797	chr2L	12731054	intron	MRP +	chr2L	12733452	intron	MRP +	chr2L	12735851	intron	MRP +	chr2L_8_12730001	chr2L_12730001	RAL-707
219	chr2L	12739175	12739205	chr2L	12743956	12743986	Doc	7	4781	1.0	4.5	2.8	1.8	4811	chr2L	12739175	exon	MRP +	chr2L	12741580	intron	MRP +	chr2L	12743986	exon	MRP +	chr2L_7_12740001	chr2L_12740001	RAL-707
221	chr2L	12791601	12791627	chr2L	12795276	12795302	F-element	8	3675	5.5	3.0	4.2	1.5	3701	chr2L	12791601	intergenic	not near genes	chr2L	12793452	intergenic	not near genes	chr2L	12795302	intergenic	not near genes	chr2L_8_12790001	chr2L_12790001	RAL-707
223	chr2L	12861693	12861718	chr2L	12863160	12863182	hobo	8	1466	3.0	2.5	2.8	2.1	1489	chr2L	12861693	intergenic	not near genes	chr2L	12862438	intergenic	not near genes	chr2L	12863182	intergenic	not near genes	chr2L_8_12860001	chr2L_12860001	RAL-707
224	chr2L	12894030	12894054	chr2L	12895496	12895520	hobo	4	1466	4.5	5.5	5.0	0.7	1490	chr2L	12894030	intergenic	not near genes	chr2L	12894775	intergenic	not near genes	chr2L	12895520	intergenic	not near genes	chr2L_4_12890001	chr2L_12890001	RAL-707
225	chr2L	12933849	12933873	chr2L	12941316	12941339	blood	8	7467	6.5	2.5	4.5	1.5	7490	chr2L	12933849	intergenic	not near genes	chr2L	12937594	intergenic	not near genes	chr2L	12941339	intergenic	not near genes	chr2L_8_12935001	chr2L_12935001	RAL-707
228	chr2L	13405647	13405676	chr2L	13410444	13410473	Doc	15	4797	2.0	3.0	2.5	4.3	4826	chr2L	13405647	exon	CG7110 +	chr2L	13408060	intron	CG7110 +	chr2L	13410473	intron	CG7110 +	chr2L_15_13405001	chr2L_13405001	RAL-707
230	chr2L	13449464	13449494	chr2L	13456900	13456929	Quasimodo	6	7436	3.0	4.0	3.5	1.3	7465	chr2L	13449464	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453196	intron	CG42784 +	chr2L	13456929	intron	CG42784 +	chr2L_6_13450001	chr2L_13450001	RAL-707
231	chr2L	13481450	13481473	chr2L	13482057	13482080	jockey	5	607	5.0	7.5	6.2	0.7	630	chr2L	13481450	intron	CG42784 +	chr2L	13481765	intron	CG42784 +	chr2L	13482080	intron	CG42784 +	chr2L_5_13480001	chr2L_13480001	RAL-707
237	chr2L	13761807	13761821	chr2L	13762913	13762932	Doc	7	1110	5.5	2.5	4.0	1.4	1125	chr2L	13761807	intron	TM9SF4 +	chr2L	13762370	intron	TM9SF4 +	chr2L	13762932	intron	TM9SF4 +	chr2L_7_13760001	chr2L_13760001	RAL-707
239	chr2L	13853096	13853106	chr2L	13862247	13862257	roo	5	9151	6.5	4.0	5.2	0.8	9161	chr2L	13853096	intron	CenG1A +	chr2L	13857676	intron	CenG1A +	chr2L	13862257	intron	CenG1A +	chr2L_5_13855001	chr2L_13855001	RAL-707
248	chr2L	14642572	14642604	chr2L	14651735	14651767	roo	12	9163	1.0	2.5	1.8	4.3	9195	chr2L	14642572	intron	osp -	chr2L	14647170	intron	osp -	chr2L	14651767	intron	osp -	chr2L_12_14645001	chr2L_14645001	RAL-707
249	chr2L	14803883	14803910	chr2L	14809086	14809112	copia	7	5203	1.5	4.5	3.0	1.8	5229	chr2L	14803883	intergenic	not near genes	chr2L	14806498	intergenic	not near genes	chr2L	14809112	intergenic	not near genes	chr2L_7_14805001	chr2L_14805001	RAL-707
258	chr2L	15446050	15446078	chr2L	15453519	15453547	blood	6	7469	2.0	3.0	2.5	1.7	7497	chr2L	15446050	intergenic	not near genes	chr2L	15449798	intergenic	not near genes	chr2L	15453547	intergenic	not near genes	chr2L_6_15445001	chr2L_15445001	RAL-707
261	chr2L	15586411	15586441	chr2L	15593463	15593493	297	4	7052	2.5	3.0	2.8	1.1	7082	chr2L	15586411	intergenic	not near genes	chr2L	15589952	intergenic	not near genes	chr2L	15593493	intergenic	not near genes	chr2L_4_15585001	chr2L_15585001	RAL-707
267	chr2L	15956023	15956052	chr2L	15957490	15957519	hobo	10	1467	5.0	5.0	5.0	1.7	1496	chr2L	15956023	intron	beat-Ib -	chr2L	15956771	intron	beat-Ib -	chr2L	15957519	intron	beat-Ib -	chr2L_10_15955001	chr2L_15955001	RAL-707
272	chr2L	16071771	16071771	chr2L	16217659	16217660	copia	12	145889	14.5	11.5	13.0	0.9	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_12_16140001	chr2L_16140001	RAL-707
273	chr2L	16141171	16141191	chr2L	16146378	16146398	copia	9	5207	2.5	2.5	2.5	2.6	5227	chr2L	16141171	intergenic	not near genes	chr2L	16143784	intergenic	not near genes	chr2L	16146398	intergenic	not near genes	chr2L_9_16140001	chr2L_16140001	RAL-707
276	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	5	145889	14.5	11.5	13.0	0.4	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_5_16140001	chr2L_16140001	RAL-707
279	chr2L	16280250	16280285	chr2L	16281418	16281453	1360	12	1168	1.0	4.5	2.8	3.2	1203	chr2L	16280250	intron	crp -	chr2L	16280852	intron	crp -	chr2L	16281453	intron	crp -	chr2L_12_16280001	chr2L_16280001	RAL-707
284	chr2L	16511967	16511996	chr2L	16519081	16519110	HMS-Beagle	5	7114	0.5	0.0	0.2	4.2	7143	chr2L	16511967	intron	CG5953 -	chr2L	16515538	intron	CG5953 -	chr2L	16519110	intron	CG5953 -	chr2L_5_16515001	chr2L_16515001	RAL-707
295	chr2L	17167567	17167584	chr2L	17167808	17167825	pogo	4	240	2.5	4.0	3.2	1.0	258	chr2L	17167567	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167696	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167825	intron,intron	CG34106 +,beat-IIIa +	chr2L_4_17165001	chr2L_17165001	RAL-707
298	chr2L	17273192	17273223	chr2L	17277975	17278004	F-element	10	4782	3.5	2.5	3.0	2.5	4812	chr2L	17273192	intergenic	not near genes	chr2L	17275598	intergenic	not near genes	chr2L	17278004	intergenic	not near genes	chr2L_10_17275001	chr2L_17275001	RAL-707
302	chr2L	17432023	17432046	chr2L	17432130	17432153	1360	5	107	0.0	0.0	0.0	5.0	130	chr2L	17432023	intron	Dif -	chr2L	17432088	intron	Dif -	chr2L	17432153	intron	Dif -	chr2L_5_17430001	chr2L_17430001	RAL-707
306	chr2L	17819921	17819951	chr2L	17825124	17825152	copia	7	5202	1.0	3.0	2.0	2.3	5231	chr2L	17819921	intron	CadN2 -	chr2L	17822536	intron	CadN2 -	chr2L	17825152	intron	CadN2 -	chr2L_7_17820001	chr2L_17820001	RAL-707
308	chr2L	17911959	17911990	chr2L	17914137	17914168	pogo	7	2178	2.5	4.0	3.2	1.7	2209	chr2L	17911959	intergenic	not near genes	chr2L	17913064	intergenic	not near genes	chr2L	17914168	intergenic	CG43271 -	chr2L_7_17910001	chr2L_17910001	RAL-707
309	chr2L	17951945	17951978	chr2L	17953411	17953445	hobo	9	1467	3.5	1.0	2.2	2.8	1500	chr2L	17951945	intergenic	CR44398 -,CR44397 -	chr2L	17952695	intergenic	not near genes	chr2L	17953445	intergenic	not near genes	chr2L_9_17950001	chr2L_17950001	RAL-707
311	chr2L	18051876	18051909	chr2L	18061023	18061056	roo	7	9147	2.0	3.5	2.8	1.8	9180	chr2L	18051876	intron	rdo +	chr2L	18056466	intron	rdo +	chr2L	18061056	intron	rdo +	chr2L_7_18055001	chr2L_18055001	RAL-707
327	chr2L	19147369	19147401	chr2L	19154404	19154436	297	5	7034	2.0	1.5	1.8	1.8	7067	chr2L	19147369	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154436	intron	brat +	chr2L_5_19150001	chr2L_19150001	RAL-707
331	chr2L	19345014	19345046	chr2L	19357223	19357255	blood	7	12209	2.0	3.5	2.8	1.8	12241	chr2L	19345014	intron	dnt -	chr2L	19351134	intron	dnt -	chr2L	19357255	intron	dnt -	chr2L_7_19350001	chr2L_19350001	RAL-707
339	chr2L	19620092	19620129	chr2L	19621081	19621117	jockey	12	988	0.5	3.0	1.8	4.3	1025	chr2L	19620092	intron	Lar +	chr2L	19620604	intron	Lar +	chr2L	19621117	intron	Lar +	chr2L_12_19620001	chr2L_19620001	RAL-707
340	chr2L	19652572	19652602	chr2L	19674007	19674038	opus	6	21436	2.5	4.0	3.2	1.4	21466	chr2L	19652572	intron	Lar +	chr2L	19663305	intron	Lar +	chr2L	19674038	intron	Lar +	chr2L_6_19660001	chr2L_19660001	RAL-707
343	chr2L	19703535	19703569	chr2L	19712671	19712705	roo	10	9136	5.0	0.0	2.5	2.9	9170	chr2L	19703535	intron	Lar +	chr2L	19708120	intron	Lar +	chr2L	19712705	intron	Lar +	chr2L_10_19705001	chr2L_19705001	RAL-707
345	chr2L	19737364	19737388	chr2L	19740831	19740857	1360	5	3468	1.5	3.0	2.2	1.6	3493	chr2L	19737364	intergenic	Nf-YB +	chr2L	19739110	intergenic	not near genes	chr2L	19740857	intergenic	not near genes	chr2L_5_19735001	chr2L_19735001	RAL-707
346	chr2L	19762813	19762835	chr2L	19763051	19763077	pogo	6	241	1.5	1.0	1.2	2.7	264	chr2L	19762813	5` UTR	fbp -	chr2L	19762945	intron	fbp -	chr2L	19763077	intron	fbp -	chr2L_6_19760001	chr2L_19760001	RAL-707
353	chr2L	20005885	20005903	chr2L	20010961	20010979	flea	7	5076	1.0	3.5	2.2	2.2	5094	chr2L	20005885	intron	CG43861 -	chr2L	20008432	intron	CG43861 -	chr2L	20010979	intron	CG43861 -	chr2L_7_20005001	chr2L_20005001	RAL-707
360	chr2L	20272118	20272142	chr2L	20282829	20282853	copia	5	10711	1.5	8.0	4.8	0.9	10735	chr2L	20272118	intergenic	not near genes	chr2L	20277486	intergenic	not near genes	chr2L	20282853	intergenic	not near genes	chr2L_5_20275001	chr2L_20275001	RAL-707
363	chr2L	20303164	20303192	chr2L	20310632	20310660	blood	7	7468	0.5	3.0	1.8	2.5	7496	chr2L	20303164	intergenic	not near genes	chr2L	20306912	intergenic	not near genes	chr2L	20310660	intergenic	not near genes	chr2L_7_20305001	chr2L_20305001	RAL-707
366	chr2L	20372220	20372259	chr2L	20372470	20372500	pogo	4	246	0.0	3.5	1.8	1.4	280	chr2L	20372220	intergenic	Ugt37a1 -	chr2L	20372360	intergenic	Ugt37a1 -	chr2L	20372500	exon	Ugt37a1 -	chr2L_4_20370001	chr2L_20370001	RAL-707
368	chr2L	20568670	20568686	chr2L	20569059	20569076	X-element	5	389	3.0	1.5	2.2	1.6	406	chr2L	20568670	intron	CR45347 +	chr2L	20568873	intron	CR45347 +	chr2L	20569076	intron	CR45347 +	chr2L_5_20565001	chr2L_20565001	RAL-707
369	chr2L	20576219	20576251	chr2L	20583687	20583719	blood	6	7468	1.5	3.0	2.2	1.9	7500	chr2L	20576219	intergenic	CR45347 +	chr2L	20579969	intergenic	not near genes	chr2L	20583719	3` UTR	CR44909 -	chr2L_6_20575001	chr2L_20575001	RAL-707
376	chr2L	20835809	20835840	chr2L	20836526	20836557	Quasimodo	5	717	1.5	2.5	2.0	1.7	748	chr2L	20835809	5` UTR	Oseg5 -	chr2L	20836183	intergenic	Oseg5 -,Spn38F -	chr2L	20836557	intergenic	Spn38F -	chr2L_5_20835001	chr2L_20835001	RAL-707
377	chr2L	20901477	20901489	chr2L	20902641	20902653	1360	4	1164	0.5	0.5	0.5	2.7	1176	chr2L	20901477	intron,intron	CG43739 -,sky -	chr2L	20902065	intron,intron	CG43739 -,sky -	chr2L	20902653	intron,intron	CG43739 -,sky -	chr2L_4_20900001	chr2L_20900001	RAL-707
379	chr2L	20976641	20976667	chr2L	20981456	20981482	X-element	7	4815	1.5	4.0	2.8	1.8	4841	chr2L	20976641	intron	CG42238 -	chr2L	20979062	intron	CG42238 -	chr2L	20981482	intron	CG42238 -	chr2L_7_20975001	chr2L_20975001	RAL-707
383	chr2L	21020272	21020301	chr2L	21023948	21023977	NOF	5	3677	0.5	3.0	1.8	1.8	3705	chr2L	21020272	intron	CG42238 -	chr2L	21022124	intron	CG42238 -	chr2L	21023977	intron	CG42238 -	chr2L_5_21020001	chr2L_21020001	RAL-707
384	chr2L	21041133	21041168	chr2L	21049394	21049424	Tirant	11	8260	2.5	1.5	2.0	3.7	8291	chr2L	21041133	intron	CG42238 -	chr2L	21045278	intron	CG42238 -	chr2L	21049424	intron	CG42238 -	chr2L_11_21045001	chr2L_21045001	RAL-707
393	chr2L	21597031	21597057	chr2L	21604775	21604801	roo	6	7744	2.0	1.5	1.8	2.1	7770	chr2L	21597031	intergenic	not near genes	chr2L	21600916	intergenic	not near genes	chr2L	21604801	intergenic	not near genes	chr2L_6_21600001	chr2L_21600001	RAL-707
394	chr2L	21691835	21691852	chr2L	21698305	21698322	Burdock	5	6470	2.5	1.5	2.0	1.7	6487	chr2L	21691835	intron	CG31619 +	chr2L	21695078	intron	CG31619 +	chr2L	21698322	intron	CG31619 +	chr2L_5_21695001	chr2L_21695001	RAL-707
404	chr2L	21981682	21981715	chr2L	21990847	21990880	roo	10	9165	2.5	0.5	1.5	4.0	9198	chr2L	21981682	exon	CG2528 -	chr2L	21986281	intron	CG2528 -	chr2L	21990880	exon	CG2528 -	chr2L_10_21985001	chr2L_21985001	RAL-707
407	chr2L	22548921	22548942	chr2L	22550146	22550167	1360	6	1225	0.0	4.0	2.0	2.0	1246	chr2L	22548921	intergenic	CG17490 +	chr2L	22549544	intergenic	not near genes	chr2L	22550167	intergenic	CG17493 +	chr2L_6_22545001	chr2L_22545001	RAL-707
410	chr2L	22581977	22581996	chr2L	22583766	22583785	S-element	4	1789	2.0	2.0	2.0	1.3	1808	chr2L	22581977	intron	CG17494 +	chr2L	22582881	intron	CG17494 +	chr2L	22583785	intron	CG17494 +	chr2L_4_22580001	chr2L_22580001	RAL-707
411	chr2L	22719440	22719464	chr2L	22727563	22727587	gypsy2	8	8122	0.5	2.5	1.5	3.2	8147	chr2L	22719440	intron	CG40006 -	chr2L	22723514	intron	CG40006 -	chr2L	22727587	intron	CG40006 -	chr2L_8_22720001	chr2L_22720001	RAL-707
412	chr2L	22776422	22776452	chr2L	22778211	22778240	S-element	7	1789	0.5	1.5	1.0	3.5	1818	chr2L	22776422	intergenic	not near genes	chr2L	22777331	intergenic	not near genes	chr2L	22778240	intergenic	not near genes	chr2L_7_22775001	chr2L_22775001	RAL-707
414	chr2L	23006503	23006538	chr2L	23007179	23007213	Osvaldo	10	676	3.0	2.0	2.5	2.9	710	chr2L	23006503	intron	Cht3 -	chr2L	23006858	intron	Cht3 -	chr2L	23007213	intron	Cht3 -	chr2L_10_23005001	chr2L_23005001	RAL-707
415	chr2R	529336	529345	chr2R	537961	537970	Max-element	4	8624	3.0	1.5	2.2	1.2	8634	chr2R	529336	intron	CG40378 +	chr2R	533653	intron	CG40378 +	chr2R	537970	intron	CG40378 +	chr2R_4_530001	chr2R_530001	RAL-707
416	chr2R	1082370	1082383	chr2R	1087134	1087158	Doc	6	4774	2.5	4.0	3.2	1.4	4788	chr2R	1082370	intron	rl +	chr2R	1084764	intron	rl +	chr2R	1087158	intron	rl +	chr2R_6_1080001	chr2R_1080001	RAL-707
418	chr2R	2498982	2499014	chr2R	2508129	2508161	roo	10	9147	2.0	1.0	1.5	4.0	9179	chr2R	2498982	intron	MFS17 -	chr2R	2503572	intron	MFS17 -	chr2R	2508161	intron	MFS17 -	chr2R_10_2500001	chr2R_2500001	RAL-707
419	chr2R	2591544	2591559	chr2R	2594219	2594235	roo	4	2675	16.5	13.5	15.0	0.2	2691	chr2R	2591544	intergenic	not near genes	chr2R	2592890	intergenic	not near genes	chr2R	2594235	intergenic	not near genes	chr2R_4_2590001	chr2R_2590001	RAL-707
420	chr2R	3144092	3144107	chr2R	3393370	3393385	Doc	4	249278	15.5	2.5	9.0	0.4	249293	chr2R	3144092	intron	CG42596 +	chr2R	3268738	intergenic	not near genes	chr2R	3393385	intergenic	not near genes	chr2R_4_3265001	chr2R_3265001	RAL-707
424	chr2R	4622954	4622987	chr2R	4624112	4624146	1360	6	1159	6.5	1.5	4.0	1.2	1192	chr2R	4622954	intergenic	CR44101 -	chr2R	4623550	intergenic	not near genes	chr2R	4624146	intergenic	not near genes	chr2R_6_4620001	chr2R_4620001	RAL-707
427	chr2R	4838873	4838888	chr2R	4840395	4840411	transib2	8	1523	6.5	3.5	5.0	1.3	1538	chr2R	4838873	intergenic	not near genes	chr2R	4839642	intergenic	not near genes	chr2R	4840411	intergenic	not near genes	chr2R_8_4835001	chr2R_4835001	RAL-707
441	chr2R	5869274	5869309	chr2R	5874350	5874385	flea	8	5076	1.0	0.5	0.8	4.4	5111	chr2R	5869274	intergenic	not near genes	chr2R	5871830	intergenic	not near genes	chr2R	5874385	intergenic	not near genes	chr2R_8_5870001	chr2R_5870001	RAL-707
450	chr2R	6096718	6096751	chr2R	6101916	6101949	BS	10	5198	2.0	3.0	2.5	2.9	5231	chr2R	6096718	intron	EcR -	chr2R	6099334	intron	EcR -	chr2R	6101949	intron	EcR -	chr2R_10_6095001	chr2R_6095001	RAL-707
455	chr2R	6622143	6622176	chr2R	6622615	6622648	invader1	18	472	5.0	1.0	3.0	4.5	505	chr2R	6622143	intergenic	not near genes	chr2R	6622396	intergenic	not near genes	chr2R	6622648	intergenic	not near genes	chr2R_18_6620001	chr2R_6620001	RAL-707
457	chr2R	6664190	6664206	chr2R	6665991	6666007	S-element	7	1801	3.5	1.5	2.5	2.0	1817	chr2R	6664190	intron,3` UTR	Adf1 +,CR45128 -	chr2R	6665098	intron	Adf1 +	chr2R	6666007	intron	Adf1 +	chr2R_7_6665001	chr2R_6665001	RAL-707
470	chr2R	7196573	7196594	chr2R	7201346	7201369	F-element	7	4775	2.0	3.5	2.8	1.8	4796	chr2R	7196573	intron	pk +	chr2R	7198971	intron	pk +	chr2R	7201369	intron	pk +	chr2R_7_7195001	chr2R_7195001	RAL-707
472	chr2R	7209870	7209874	chr2R	7217630	7217635	roo	4	7761	0.0	1.5	0.8	2.2	7765	chr2R	7209870	intron	pk +	chr2R	7213752	intron	pk +	chr2R	7217635	intron	pk +	chr2R_4_7210001	chr2R_7210001	RAL-707
473	chr2R	7235828	7235850	chr2R	7240920	7240942	jockey	14	5092	3.5	4.0	3.8	2.9	5114	chr2R	7235828	intergenic	not near genes	chr2R	7238385	intergenic	not near genes	chr2R	7240942	intergenic	not near genes	chr2R_14_7235001	chr2R_7235001	RAL-707
480	chr2R	7434895	7434912	chr2R	7439196	7439213	Juan	4	4301	3.0	4.5	3.8	0.8	4318	chr2R	7434895	intergenic	so +	chr2R	7437054	intergenic	not near genes	chr2R	7439213	intergenic	not near genes	chr2R_4_7435001	chr2R_7435001	RAL-707
481	chr2R	7608408	7608435	chr2R	7613611	7613638	I-element	8	5203	2.5	0.0	1.2	3.6	5230	chr2R	7608408	intron	CG1358 -	chr2R	7611023	intron	CG1358 -	chr2R	7613638	intron	CG1358 -	chr2R_8_7610001	chr2R_7610001	RAL-707
482	chr2R	7815681	7815695	chr2R	7822150	7822164	Burdock	6	6469	6.0	1.5	3.8	1.2	6483	chr2R	7815681	intergenic	CG1882 +	chr2R	7818922	intergenic	not near genes	chr2R	7822164	3` UTR	cathD -	chr2R_6_7815001	chr2R_7815001	RAL-707
483	chr2R	7869190	7869221	chr2R	7873976	7874006	Doc	14	4786	3.0	7.0	5.0	2.3	4816	chr2R	7869190	intron	Dgk -	chr2R	7871598	intron	Dgk -	chr2R	7874006	intron	Dgk -	chr2R_14_7870001	chr2R_7870001	RAL-707
488	chr2R	8330868	8330893	chr2R	8331354	8331379	roo	9	486	2.0	3.5	2.8	2.4	511	chr2R	8330868	intron	pdm3 +	chr2R	8331124	intron	pdm3 +	chr2R	8331379	intron	pdm3 +	chr2R_9_8330001	chr2R_8330001	RAL-707
489	chr2R	8398206	8398240	chr2R	8402987	8403021	Doc	7	4780	4.5	1.0	2.8	1.8	4815	chr2R	8398206	intron	CG2121 -	chr2R	8400614	intron	CG2121 -	chr2R	8403021	intron	CG2121 -	chr2R_7_8400001	chr2R_8400001	RAL-707
497	chr2R	8722766	8722795	chr2R	8723007	8723036	pogo	9	240	3.5	6.0	4.8	1.6	270	chr2R	8722766	intron	CG14767 -	chr2R	8722901	intron	CG14767 -	chr2R	8723036	intron	CG14767 -	chr2R_9_8720001	chr2R_8720001	RAL-707
506	chr2R	9212702	9212721	chr2R	9213188	9213207	roo	7	485	4.0	4.0	4.0	1.4	505	chr2R	9212702	intergenic	CR45309 +	chr2R	9212954	intergenic	CR45309 +	chr2R	9213207	5` UTR	CR45309 +	chr2R_7_9210001	chr2R_9210001	RAL-707
516	chr2R	9945434	9945446	chr2R	9945630	9945642	BS	6	196	6.5	1.0	3.8	1.2	208	chr2R	9945434	intron	Mef2 -	chr2R	9945538	intron	Mef2 -	chr2R	9945642	intron	Mef2 -	chr2R_6_9945001	chr2R_9945001	RAL-707
518	chr2R	10005851	10005879	chr2R	10007016	10007044	1360	15	1164	4.0	5.0	4.5	2.7	1193	chr2R	10005851	intron	Pka-R2 -	chr2R	10006448	intron	Pka-R2 -	chr2R	10007044	intron	Pka-R2 -	chr2R_15_10005001	chr2R_10005001	RAL-707
522	chr2R	10176877	10176903	chr2R	10186044	10186070	roo	4	9167	3.5	1.0	2.2	1.2	9193	chr2R	10176877	intron	KCNQ -	chr2R	10181474	intron	KCNQ -	chr2R	10186070	intron	KCNQ -	chr2R_4_10180001	chr2R_10180001	RAL-707
537	chr2R	10585574	10585590	chr2R	10594156	10594173	Tirant	6	8583	3.0	4.0	3.5	1.3	8599	chr2R	10585574	intron	psq +	chr2R	10589874	intron	psq +	chr2R	10594173	intron	psq +	chr2R_6_10585001	chr2R_10585001	RAL-707
538	chr2R	10622351	10622365	chr2R	10637115	10637125	mdg1	8	14764	2.5	2.5	2.5	2.3	14774	chr2R	10622351	intron	CG11883 +	chr2R	10629738	intron	CG11883 +	chr2R	10637125	intron	CG11883 +	chr2R_8_10625001	chr2R_10625001	RAL-707
545	chr2R	10979656	10979681	chr2R	10980126	10980148	297	4	468	2.0	1.5	1.8	1.4	492	chr2R	10979656	intergenic	not near genes	chr2R	10979902	intergenic	not near genes	chr2R	10980148	intergenic	not near genes	chr2R_4_10975001	chr2R_10975001	RAL-707
546	chr2R	11009818	11009840	chr2R	11018990	11019014	roo	11	9174	0.5	3.0	1.8	3.9	9196	chr2R	11009818	intron	luna -	chr2R	11014416	intron	luna -	chr2R	11019014	intron	luna -	chr2R_11_11010001	chr2R_11010001	RAL-707
551	chr2R	11207813	11207845	chr2R	11208005	11208037	BS	9	192	1.5	2.5	2.0	3.0	224	chr2R	11207813	intron	shn +	chr2R	11207925	intron	shn +	chr2R	11208037	intron	shn +	chr2R_9_11205001	chr2R_11205001	RAL-707
556	chr2R	11415527	11415546	chr2R	11418675	11418695	opus	8	3149	1.5	4.0	2.8	2.1	3168	chr2R	11415527	intron	Drip -	chr2R	11417111	intron	Drip -	chr2R	11418695	intron	Drip -	chr2R_8_11415001	chr2R_11415001	RAL-707
558	chr2R	11472647	11472674	chr2R	11473844	11473871	pogo	10	1197	3.0	3.0	3.0	2.5	1224	chr2R	11472647	intergenic	not near genes	chr2R	11473259	intergenic	not near genes	chr2R	11473871	intergenic	not near genes	chr2R_10_11470001	chr2R_11470001	RAL-707
576	chr2R	12481141	12481168	chr2R	12482945	12482971	roo	7	1803	3.5	5.5	4.5	1.3	1830	chr2R	12481141	exon	Dh44-R2 +	chr2R	12482056	intron	Dh44-R2 +	chr2R	12482971	intron	Dh44-R2 +	chr2R_7_12480001	chr2R_12480001	RAL-707
578	chr2R	12501704	12501719	chr2R	12503866	12503881	Rt1c	4	2161	1.5	11.5	6.5	0.5	2177	chr2R	12501704	intron	fdl -	chr2R	12502792	intron	fdl -	chr2R	12503881	intron	fdl -	chr2R_4_12500001	chr2R_12500001	RAL-707
586	chr2R	12707529	12707541	chr2R	12715895	12715907	roo	6	8366	0.0	2.5	1.2	2.7	8378	chr2R	12707529	intron	CG42663 +	chr2R	12711718	intron	CG42663 +	chr2R	12715907	intron	CG42663 +	chr2R_6_12710001	chr2R_12710001	RAL-707
589	chr2R	12789295	12789327	chr2R	12797658	12797690	roo	12	8362	1.5	5.5	3.5	2.7	8395	chr2R	12789295	intron,3` UTR	sca +,CR45137 -	chr2R	12793492	intron,intron	sca +,CR45137 -	chr2R	12797690	intron,3` UTR	sca +,CR45137 -	chr2R_12_12790001	chr2R_12790001	RAL-707
590	chr2R	12819467	12819476	chr2R	12824536	12824545	jockey	5	5069	1.0	4.5	2.8	1.3	5078	chr2R	12819467	intergenic	not near genes	chr2R	12822006	intergenic	not near genes	chr2R	12824545	intergenic	not near genes	chr2R_5_12820001	chr2R_12820001	RAL-707
595	chr2R	13136845	13136869	chr2R	13141638	13141666	Doc	6	4797	4.0	7.0	5.5	0.9	4821	chr2R	13136845	exon	Cap-G +	chr2R	13139256	intron	Cap-G +	chr2R	13141666	intron	Cap-G +	chr2R_6_13135001	chr2R_13135001	RAL-707
604	chr2R	13580496	13580517	chr2R	13580846	13580867	jockey	9	350	0.5	2.5	1.5	3.6	371	chr2R	13580496	3` UTR	CG6191 -	chr2R	13580682	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580867	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_9_13580001	chr2R_13580001	RAL-707
611	chr2R	13905613	13905634	chr2R	13907595	13907616	Rt1a	7	1982	2.5	6.0	4.2	1.3	2003	chr2R	13905613	intron	shot -	chr2R	13906614	intron	shot -	chr2R	13907616	intron	shot -	chr2R_7_13905001	chr2R_13905001	RAL-707
620	chr2R	14467310	14467327	chr2R	14476468	14476485	roo	12	9158	3.0	5.5	4.2	2.3	9175	chr2R	14467310	intergenic	not near genes	chr2R	14471898	intergenic	not near genes	chr2R	14476485	5` UTR	CR44462 +	chr2R_12_14470001	chr2R_14470001	RAL-707
621	chr2R	14497395	14497419	chr2R	14498561	14498585	1360	5	1166	2.0	6.0	4.0	1.0	1190	chr2R	14497395	3` UTR	Cpsf160 -	chr2R	14497990	intron	Cpsf160 -	chr2R	14498585	3` UTR	Cpsf160 -	chr2R_5_14495001	chr2R_14495001	RAL-707
629	chr2R	14889208	14889237	chr2R	14897816	14897842	Max-element	8	8607	2.5	0.0	1.2	3.6	8634	chr2R	14889208	intergenic	Cyp6a8 -	chr2R	14893525	intergenic	not near genes	chr2R	14897842	intergenic	not near genes	chr2R_8_14890001	chr2R_14890001	RAL-707
631	chr2R	15004724	15004760	chr2R	15005053	15005089	jockey	13	329	1.5	0.5	1.0	6.5	365	chr2R	15004724	intergenic	not near genes	chr2R	15004906	intergenic	not near genes	chr2R	15005089	intergenic	not near genes	chr2R_13_15000001	chr2R_15000001	RAL-707
632	chr2R	15015454	15015489	chr2R	15022878	15022913	mdg1	9	7424	3.0	0.0	1.5	3.6	7459	chr2R	15015454	intron	hbs +	chr2R	15019184	intron	hbs +	chr2R	15022913	intron	hbs +	chr2R_9_15015001	chr2R_15015001	RAL-707
633	chr2R	15084980	15085005	chr2R	15092028	15092054	297	4	7049	0.5	4.5	2.5	1.1	7074	chr2R	15084980	intergenic	not near genes	chr2R	15088517	intergenic	not near genes	chr2R	15092054	5` UTR	CR44457 +	chr2R_4_15085001	chr2R_15085001	RAL-707
635	chr2R	15119316	15119348	chr2R	15127797	15127829	Tirant	12	8480	3.0	3.0	3.0	3.0	8513	chr2R	15119316	intron	chn +	chr2R	15123572	intron	chn +	chr2R	15127829	intron	chn +	chr2R_12_15120001	chr2R_15120001	RAL-707
661	chr2R	17147248	17147270	chr2R	17152279	17152301	jockey	5	5031	4.5	6.0	5.2	0.8	5053	chr2R	17147248	intergenic	not near genes	chr2R	17149774	intergenic	not near genes	chr2R	17152301	intergenic	not near genes	chr2R_5_17145001	chr2R_17145001	RAL-707
662	chr2R	17176353	17176385	chr2R	17182543	17182575	diver	6	6190	3.0	1.5	2.2	1.9	6222	chr2R	17176353	intergenic	not near genes	chr2R	17179464	intergenic	not near genes	chr2R	17182575	intergenic	not near genes	chr2R_6_17175001	chr2R_17175001	RAL-707
663	chr2R	17236507	17236541	chr2R	17241711	17241745	copia	10	5204	1.5	1.5	1.5	4.0	5238	chr2R	17236507	intron	mbl +	chr2R	17239126	intron	mbl +	chr2R	17241745	intron	mbl +	chr2R_10_17235001	chr2R_17235001	RAL-707
667	chr2R	17485916	17485932	chr2R	17490686	17490702	F-element	6	4770	1.5	1.0	1.2	2.7	4786	chr2R	17485916	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488309	intron	NT5E-2 +	chr2R	17490702	intron	NT5E-2 +	chr2R_6_17485001	chr2R_17485001	RAL-707
672	chr2R	17784029	17784049	chr2R	17784268	17784288	pogo	5	239	0.0	2.0	1.0	2.5	259	chr2R	17784029	intergenic	mir-31a -	chr2R	17784158	intergenic	mir-31a -	chr2R	17784288	intergenic	mir-31a -	chr2R_5_17780001	chr2R_17780001	RAL-707
682	chr2R	18111690	18111708	chr2R	18115557	18115576	F-element	5	3868	2.0	1.5	1.8	1.8	3886	chr2R	18111690	intergenic	not near genes	chr2R	18113633	intergenic	not near genes	chr2R	18115576	intergenic	not near genes	chr2R_5_18110001	chr2R_18110001	RAL-707
688	chr2R	18358391	18358421	chr2R	18372603	18372633	roo	7	14212	3.5	0.0	1.8	2.5	14242	chr2R	18358391	intergenic	not near genes	chr2R	18365512	intergenic	not near genes	chr2R	18372633	intergenic	not near genes	chr2R_7_18365001	chr2R_18365001	RAL-707
692	chr2R	18590865	18590898	chr2R	18600017	18600050	roo	10	9152	2.5	1.5	2.0	3.3	9185	chr2R	18590865	intron	GEFmeso -	chr2R	18595458	intron	GEFmeso -	chr2R	18600050	intron	GEFmeso -	chr2R_10_18595001	chr2R_18595001	RAL-707
715	chr2R	19914845	19914877	chr2R	19922257	19922289	mdg1	9	7412	3.5	2.5	3.0	2.2	7444	chr2R	19914845	intergenic	not near genes	chr2R	19918567	intergenic	not near genes	chr2R	19922289	intergenic	not near genes	chr2R_9_19915001	chr2R_19915001	RAL-707
716	chr2R	19957434	19957462	chr2R	19962635	19962664	copia	8	5201	1.5	1.5	1.5	3.2	5230	chr2R	19957434	intergenic	CG44623 +	chr2R	19960049	intergenic	not near genes	chr2R	19962664	intergenic	not near genes	chr2R_8_19960001	chr2R_19960001	RAL-707
723	chr2R	20739442	20739470	chr2R	20744210	20744238	F-element	5	4768	2.0	3.0	2.5	1.4	4796	chr2R	20739442	intron	dpr +	chr2R	20741840	intron	dpr +	chr2R	20744238	intron	dpr +	chr2R_5_20740001	chr2R_20740001	RAL-707
724	chr2R	20783312	20783333	chr2R	20788084	20788104	F-element	5	4772	2.5	2.5	2.5	1.4	4792	chr2R	20783312	intergenic	not near genes	chr2R	20785708	intergenic	not near genes	chr2R	20788104	intergenic	CG43666 -	chr2R_5_20785001	chr2R_20785001	RAL-707
733	chr2R	21738280	21738307	chr2R	21747440	21747467	roo	5	9158	2.5	0.5	1.5	2.0	9187	chr2R	21738280	intergenic	not near genes	chr2R	21742874	intergenic	not near genes	chr2R	21747467	intergenic	not near genes	chr2R_5_21740001	chr2R_21740001	RAL-707
738	chr2R	22349693	22349722	chr2R	22351472	22351506	jockey	10	1783	3.0	3.0	3.0	2.5	1813	chr2R	22349693	intron	Liprin-gamma -	chr2R	22350600	intron	Liprin-gamma -	chr2R	22351506	intron	Liprin-gamma -	chr2R_10_22350001	chr2R_22350001	RAL-707
739	chr2R	22360380	22360394	chr2R	22360813	22360826	jockey	4	432	5.0	2.0	3.5	0.9	446	chr2R	22360380	intron	Liprin-gamma -	chr2R	22360603	intron	Liprin-gamma -	chr2R	22360826	intron	Liprin-gamma -	chr2R_4_22360001	chr2R_22360001	RAL-707
742	chr2R	22525757	22525786	chr2R	22529312	22529341	jockey	4	3555	1.5	3.5	2.5	1.1	3584	chr2R	22525757	intron	px -	chr2R	22527549	intron	px -	chr2R	22529341	intron	px -	chr2R_4_22525001	chr2R_22525001	RAL-707
747	chr2R	22774968	22774997	chr2R	22775386	22775416	jockey	12	419	4.5	5.0	4.8	2.1	448	chr2R	22774968	intron	CG42260 -	chr2R	22775192	intron	CG42260 -	chr2R	22775416	intron	CG42260 -	chr2R_12_22775001	chr2R_22775001	RAL-707
761	chr2R	23529577	23529605	chr2R	23537153	23537180	412	11	7576	2.0	5.0	3.5	2.4	7603	chr2R	23529577	intron	bw -	chr2R	23533378	intron	bw -	chr2R	23537180	exon	bw -	chr2R_11_23530001	chr2R_23530001	RAL-707
765	chr2R	23914298	23914330	chr2R	23921921	23921954	412	11	7624	2.5	3.5	3.0	2.8	7656	chr2R	23914298	exon	kcc +	chr2R	23918126	intron	kcc +	chr2R	23921954	intron	kcc +	chr2R_11_23915001	chr2R_23915001	RAL-707
771	chr2R	24177234	24177268	chr2R	24184719	24184753	412	12	7485	3.0	2.5	2.8	3.2	7519	chr2R	24177234	3` UTR	Nop60B +	chr2R	24180994	intron	Nop60B +	chr2R	24184753	3` UTR	Nop60B +	chr2R_12_24180001	chr2R_24180001	RAL-707
781	chr2R	24727886	24727914	chr2R	24735393	24735422	mdg1	11	7508	5.5	7.5	6.5	1.5	7536	chr2R	24727886	intron	Mid1 -	chr2R	24731654	intron	Mid1 -	chr2R	24735422	intron	Mid1 -	chr2R_11_24730001	chr2R_24730001	RAL-707
782	chr2R	24763608	24763642	chr2R	24765584	24765618	G2	17	1976	5.0	3.5	4.2	3.3	2010	chr2R	24763608	exon	CG3894 +	chr2R	24764613	intron	CG3894 +	chr2R	24765618	exon	CG3894 +	chr2R_17_24760001	chr2R_24760001	RAL-707
791	chr2R	25141655	25141665	chr2R	25159345	25159355	roo	4	17690	3.5	2.0	2.8	1.1	17700	chr2R	25141655	intergenic	not near genes	chr2R	25150505	intergenic	not near genes	chr2R	25159355	intergenic	not near genes	chr2R_4_25150001	chr2R_25150001	RAL-707
796	chr3L	110219	110243	chr3L	119386	119409	roo	7	9167	1.5	2.0	1.8	2.5	9190	chr3L	110219	intergenic	not near genes	chr3L	114814	intergenic	not near genes	chr3L	119409	intergenic	not near genes	chr3L_7_110001	chr3L_110001	RAL-707
799	chr3L	402693	402718	chr3L	409746	409771	297	13	7053	4.0	11.0	7.5	1.5	7078	chr3L	402693	intergenic	not near genes	chr3L	406232	intergenic	not near genes	chr3L	409771	intergenic	not near genes	chr3L_13_405001	chr3L_405001	RAL-707
805	chr3L	789912	789945	chr3L	790397	790430	roo	11	485	3.0	0.5	1.8	3.9	518	chr3L	789912	intergenic	not near genes	chr3L	790171	intergenic	not near genes	chr3L	790430	intergenic	not near genes	chr3L_11_790001	chr3L_790001	RAL-707
806	chr3L	857999	858031	chr3L	866480	866512	Tirant	7	8481	1.5	2.5	2.0	2.3	8513	chr3L	857999	intergenic	not near genes	chr3L	862256	intergenic	not near genes	chr3L	866512	5` UTR	CG12502 +	chr3L_7_860001	chr3L_860001	RAL-707
808	chr3L	939771	939800	chr3L	940891	940921	jockey	10	1121	5.0	4.0	4.5	1.8	1150	chr3L	939771	intron	Glut1 +	chr3L	940346	intron	Glut1 +	chr3L	940921	intron	Glut1 +	chr3L_10_940001	chr3L_940001	RAL-707
814	chr3L	1047353	1047378	chr3L	1055165	1055187	412	6	7811	1.5	2.0	1.8	2.1	7834	chr3L	1047353	intron	bab1 -	chr3L	1051270	intron	bab1 -	chr3L	1055187	intron	bab1 -	chr3L_6_1050001	chr3L_1050001	RAL-707
816	chr3L	1154129	1154143	chr3L	1163279	1163293	roo	8	9149	4.0	0.5	2.2	2.5	9164	chr3L	1154129	intron	bab2 -	chr3L	1158711	intron	bab2 -	chr3L	1163293	intron	bab2 -	chr3L_8_1155001	chr3L_1155001	RAL-707
818	chr3L	1219594	1219625	chr3L	1227327	1227358	412	16	7733	2.0	3.0	2.5	4.6	7764	chr3L	1219594	intron	mwh +	chr3L	1223476	intron	mwh +	chr3L	1227358	intron	mwh +	chr3L_16_1220001	chr3L_1220001	RAL-707
825	chr3L	1485737	1485742	chr3L	1486908	1486912	1360	4	1170	4.5	8.0	6.2	0.6	1175	chr3L	1485737	intron	stet -	chr3L	1486324	intron	stet -	chr3L	1486912	intron	stet -	chr3L_4_1485001	chr3L_1485001	RAL-707
832	chr3L	1740855	1740880	chr3L	1741095	1741121	pogo	7	241	2.5	1.0	1.8	2.5	266	chr3L	1740855	intron	Gk +	chr3L	1740988	intron	Gk +	chr3L	1741121	intron	Gk +	chr3L_7_1740001	chr3L_1740001	RAL-707
845	chr3L	2447503	2447537	chr3L	2456658	2456693	roo	12	9155	3.5	1.5	2.5	3.4	9190	chr3L	2447503	intron	CG45186 +	chr3L	2452098	intron	CG45186 +	chr3L	2456693	intron	CG45186 +	chr3L_12_2450001	chr3L_2450001	RAL-707
857	chr3L	3040331	3040356	chr3L	3042120	3042145	S-element	8	1789	2.5	1.0	1.8	2.9	1814	chr3L	3040331	3` UTR	CG2162 +	chr3L	3041238	intergenic	not near genes	chr3L	3042145	intergenic	Jafrac2 +	chr3L_8_3040001	chr3L_3040001	RAL-707
858	chr3L	3281440	3281473	chr3L	3281936	3281969	Doc	16	495	2.0	4.5	3.2	3.8	529	chr3L	3281440	intron	CG12017 +	chr3L	3281704	intron	CG12017 +	chr3L	3281969	intron	CG12017 +	chr3L_16_3280001	chr3L_3280001	RAL-707
861	chr3L	3475072	3475107	chr3L	3475516	3475550	jockey	11	443	0.5	4.5	2.5	3.1	478	chr3L	3475072	intron	CG42324 +	chr3L	3475311	intron	CG42324 +	chr3L	3475550	intron	CG42324 +	chr3L_11_3475001	chr3L_3475001	RAL-707
862	chr3L	3601302	3601320	chr3L	3606613	3606631	copia	5	5311	5.5	1.5	3.5	1.1	5329	chr3L	3601302	intron	Eip63E +	chr3L	3603966	intron	Eip63E +	chr3L	3606631	intron	Eip63E +	chr3L_5_3600001	chr3L_3600001	RAL-707
868	chr3L	3833749	3833770	chr3L	3833990	3834011	pogo	6	240	0.0	2.5	1.2	2.7	262	chr3L	3833749	intron	enc +	chr3L	3833880	intron	enc +	chr3L	3834011	intron	enc +	chr3L_6_3830001	chr3L_3830001	RAL-707
880	chr3L	4901126	4901157	chr3L	4907316	4907347	diver	11	6190	3.5	0.0	1.8	3.9	6221	chr3L	4901126	intergenic	CG13704 +	chr3L	4904236	intergenic	not near genes	chr3L	4907347	intergenic	not near genes	chr3L_11_4900001	chr3L_4900001	RAL-707
883	chr3L	5045457	5045468	chr3L	5050238	5050249	Doc	4	4781	4.5	2.5	3.5	0.9	4792	chr3L	5045457	intron	Con -	chr3L	5047853	intron	Con -	chr3L	5050249	intron	Con -	chr3L_4_5045001	chr3L_5045001	RAL-707
898	chr3L	5537723	5537744	chr3L	5538065	5538085	jockey	4	340	1.5	2.5	2.0	1.3	362	chr3L	5537723	intergenic	not near genes	chr3L	5537904	intergenic	not near genes	chr3L	5538085	intergenic	CG10625 -	chr3L_4_5535001	chr3L_5535001	RAL-707
901	chr3L	5926316	5926351	chr3L	5926506	5926540	BS	14	189	1.5	4.5	3.0	3.5	224	chr3L	5926316	intron	Vap-33B +	chr3L	5926428	intron	Vap-33B +	chr3L	5926540	intron	Vap-33B +	chr3L_14_5925001	chr3L_5925001	RAL-707
902	chr3L	6001683	6001693	chr3L	6004383	6004393	jockey	4	2700	2.0	0.5	1.2	1.8	2710	chr3L	6001683	intron	PVRAP +	chr3L	6003038	intron	PVRAP +	chr3L	6004393	intron	PVRAP +	chr3L_4_6000001	chr3L_6000001	RAL-707
903	chr3L	6040377	6040394	chr3L	6042733	6042750	Doc	5	2356	2.0	3.0	2.5	1.4	2373	chr3L	6040377	intergenic	Jon65Aiv +	chr3L	6041564	intergenic	not near genes	chr3L	6042750	intergenic	not near genes	chr3L_5_6040001	chr3L_6040001	RAL-707
907	chr3L	6220914	6220948	chr3L	6230066	6230100	roo	13	9152	3.0	5.5	4.2	2.5	9186	chr3L	6220914	5` UTR	pncr008:3L +	chr3L	6225507	intergenic	not near genes	chr3L	6230100	intergenic	not near genes	chr3L_13_6225001	chr3L_6225001	RAL-707
910	chr3L	6335010	6335036	chr3L	6335481	6335507	297	6	470	1.5	4.0	2.8	1.6	497	chr3L	6335010	intron	CG13300 -	chr3L	6335258	intron	CG13300 -	chr3L	6335507	intron	CG13300 -	chr3L_6_6335001	chr3L_6335001	RAL-707
911	chr3L	6405673	6405690	chr3L	6432137	6432154	roo	4	26463	0.0	2.0	1.0	2.0	26481	chr3L	6405673	intron	CG42747 +	chr3L	6418914	intron	CG42747 +	chr3L	6432154	intron	CG42747 +	chr3L_4_6415001	chr3L_6415001	RAL-707
916	chr3L	6781120	6781155	chr3L	6783133	6783168	Doc	8	2013	2.0	2.0	2.0	2.7	2048	chr3L	6781120	intergenic	not near genes	chr3L	6782144	intergenic	not near genes	chr3L	6783168	intergenic	not near genes	chr3L_8_6780001	chr3L_6780001	RAL-707
917	chr3L	6855932	6855950	chr3L	6860716	6860733	Doc	4	4784	0.5	2.0	1.2	1.8	4801	chr3L	6855932	intergenic	not near genes	chr3L	6858332	intergenic	not near genes	chr3L	6860733	intergenic	not near genes	chr3L_4_6855001	chr3L_6855001	RAL-707
918	chr3L	6887517	6887551	chr3L	6895009	6895043	roo	5	7492	2.5	1.5	2.0	1.7	7526	chr3L	6887517	intergenic	not near genes	chr3L	6891280	intergenic	not near genes	chr3L	6895043	intergenic	not near genes	chr3L_5_6890001	chr3L_6890001	RAL-707
923	chr3L	7377315	7377347	chr3L	7380420	7380452	297	5	3105	3.0	2.5	2.8	1.3	3137	chr3L	7377315	intron	SMSr -	chr3L	7378884	intron	SMSr -	chr3L	7380452	intron	SMSr -	chr3L_5_7375001	chr3L_7375001	RAL-707
925	chr3L	7498766	7498790	chr3L	7503542	7503567	F-element	7	4776	1.0	3.0	2.0	2.3	4801	chr3L	7498766	5` UTR	CG8539 -	chr3L	7501166	intergenic	not near genes	chr3L	7503567	intergenic	not near genes	chr3L_7_7500001	chr3L_7500001	RAL-707
933	chr3L	7793717	7793733	chr3L	7800767	7800785	297	4	7052	3.0	4.0	3.5	0.9	7068	chr3L	7793717	intron	CG32369 -	chr3L	7797251	intron	CG32369 -	chr3L	7800785	intron	CG32369 -	chr3L_4_7795001	chr3L_7795001	RAL-707
936	chr3L	7886515	7886546	chr3L	7889033	7889064	Stalker4	13	2518	2.0	3.5	2.8	3.4	2549	chr3L	7886515	intron	CG32365 +	chr3L	7887790	intron	CG32365 +	chr3L	7889064	intron	CG32365 +	chr3L_13_7885001	chr3L_7885001	RAL-707
938	chr3L	7916830	7916862	chr3L	7926001	7926033	roo	9	9171	0.0	0.5	0.2	7.5	9203	chr3L	7916830	3` UTR	syd -	chr3L	7921432	intron	syd -	chr3L	7926033	3` UTR	syd -	chr3L_9_7920001	chr3L_7920001	RAL-707
939	chr3L	7985375	7985397	chr3L	7987702	7987725	NOF	5	2328	0.5	3.5	2.0	1.7	2350	chr3L	7985375	intron	nmo +	chr3L	7986550	intron	nmo +	chr3L	7987725	intron	nmo +	chr3L_5_7985001	chr3L_7985001	RAL-707
944	chr3L	8481783	8481806	chr3L	8490942	8490965	roo	4	9159	2.0	8.0	5.0	0.7	9182	chr3L	8481783	intron	CG43163 -	chr3L	8486374	intron	CG43163 -	chr3L	8490965	intron	CG43163 -	chr3L_4_8485001	chr3L_8485001	RAL-707
945	chr3L	8498295	8498327	chr3L	8505762	8505794	blood	6	7467	1.0	3.0	2.0	2.0	7499	chr3L	8498295	intron	CG43163 -	chr3L	8502044	intron	CG43163 -	chr3L	8505794	intron	CG43163 -	chr3L_6_8500001	chr3L_8500001	RAL-707
948	chr3L	9076926	9076960	chr3L	9084486	9084520	412	11	7560	3.5	1.5	2.5	3.1	7594	chr3L	9076926	exon	Tequila +	chr3L	9080723	intron	Tequila +	chr3L	9084520	exon	Tequila +	chr3L_11_9080001	chr3L_9080001	RAL-707
949	chr3L	9130557	9130570	chr3L	9134318	9134330	412	9	3761	6.0	2.5	4.2	1.7	3773	chr3L	9130557	intergenic	bol -	chr3L	9132444	intergenic	not near genes	chr3L	9134330	intergenic	Dhpr +	chr3L_9_9130001	chr3L_9130001	RAL-707
950	chr3L	9164695	9164725	chr3L	9166162	9166192	hobo	7	1467	1.0	1.5	1.2	3.2	1497	chr3L	9164695	intron	Rdl -	chr3L	9165444	intron	Rdl -	chr3L	9166192	intron	Rdl -	chr3L_7_9165001	chr3L_9165001	RAL-707
952	chr3L	9219244	9219270	chr3L	9219916	9219942	jockey	7	671	5.5	2.5	4.0	1.4	698	chr3L	9219244	intergenic	not near genes	chr3L	9219593	intergenic	not near genes	chr3L	9219942	intergenic	not near genes	chr3L_7_9215001	chr3L_9215001	RAL-707
953	chr3L	9270617	9270649	chr3L	9278372	9278402	roo	16	7754	3.0	0.5	1.8	5.7	7785	chr3L	9270617	intron	GluRIB +	chr3L	9274510	intron	GluRIB +	chr3L	9278402	exon	GluRIB +	chr3L_16_9270001	chr3L_9270001	RAL-707
954	chr3L	9443512	9443543	chr3L	9445299	9445330	S-element	9	1787	3.0	1.5	2.2	2.8	1818	chr3L	9443512	intron	CG33926 +	chr3L	9444421	intron	CG33926 +	chr3L	9445330	intron	CG33926 +	chr3L_9_9440001	chr3L_9440001	RAL-707
959	chr3L	9526484	9526514	chr3L	9528164	9528194	Doc	7	1680	1.0	2.5	1.8	2.5	1710	chr3L	9526484	intergenic	not near genes	chr3L	9527339	intergenic	not near genes	chr3L	9528194	intergenic	not near genes	chr3L_7_9525001	chr3L_9525001	RAL-707
960	chr3L	9533752	9533782	chr3L	9541311	9541342	412	7	7559	1.0	5.0	3.0	1.8	7590	chr3L	9533752	intergenic	not near genes	chr3L	9537547	intergenic	not near genes	chr3L	9541342	intergenic	not near genes	chr3L_7_9535001	chr3L_9535001	RAL-707
961	chr3L	9571901	9571932	chr3L	9572249	9572280	jockey	10	348	3.0	2.5	2.8	2.6	379	chr3L	9571901	intron	CG42673 +	chr3L	9572090	intron	CG42673 +	chr3L	9572280	intron	CG42673 +	chr3L_10_9570001	chr3L_9570001	RAL-707
962	chr3L	9575907	9575929	chr3L	9580985	9581006	jockey	8	5078	4.0	2.5	3.2	1.9	5099	chr3L	9575907	intron	CG42673 +	chr3L	9578456	intron	CG42673 +	chr3L	9581006	intron	CG42673 +	chr3L_8_9575001	chr3L_9575001	RAL-707
980	chr3L	10414941	10414975	chr3L	10417313	10417347	Doc	14	2372	1.5	3.5	2.5	4.0	2406	chr3L	10414941	intergenic	CG12362 +	chr3L	10416144	intergenic	not near genes	chr3L	10417347	intergenic	not near genes	chr3L_14_10415001	chr3L_10415001	RAL-707
990	chr3L	11087077	11087088	chr3L	11088863	11088874	S-element	4	1788	0.5	7.0	3.8	0.8	1797	chr3L	11087077	intron	JIL-1 -	chr3L	11087976	intron	JIL-1 -	chr3L	11088874	intron	JIL-1 -	chr3L_4_11085001	chr3L_11085001	RAL-707
991	chr3L	11105291	11105322	chr3L	11107002	11107033	X-element	10	1711	2.5	1.5	2.0	3.3	1742	chr3L	11105291	intergenic	not near genes	chr3L	11106162	intergenic	not near genes	chr3L	11107033	exon	CG32073 -	chr3L_10_11105001	chr3L_11105001	RAL-707
995	chr3L	11264462	11264497	chr3L	11271414	11271447	17.6	7	6952	2.5	1.5	2.0	2.3	6985	chr3L	11264462	intergenic	not near genes	chr3L	11267954	intergenic	not near genes	chr3L	11271447	intergenic	not near genes	chr3L_7_11265001	chr3L_11265001	RAL-707
996	chr3L	11277463	11277476	chr3L	11278457	11278471	Rt1a	9	995	0.0	3.0	1.5	3.6	1008	chr3L	11277463	intergenic	not near genes	chr3L	11277967	intergenic	not near genes	chr3L	11278471	intergenic	not near genes	chr3L_9_11275001	chr3L_11275001	RAL-707
1002	chr3L	11564790	11564811	chr3L	11572414	11572436	412	5	7625	2.5	3.5	3.0	1.2	7646	chr3L	11564790	exon	CG33267 +	chr3L	11568613	intron	CG33267 +	chr3L	11572436	exon	CG33267 +	chr3L_5_11565001	chr3L_11565001	RAL-707
1004	chr3L	11723082	11723115	chr3L	11727877	11727910	Doc	12	4795	0.5	4.5	2.5	3.4	4828	chr3L	11723082	3` UTR	Bmcp +	chr3L	11725496	intron	Bmcp +	chr3L	11727910	3` UTR	Bmcp +	chr3L_12_11725001	chr3L_11725001	RAL-707
1007	chr3L	11864552	11864575	chr3L	11865847	11865870	pogo	8	1295	7.0	3.0	5.0	1.3	1318	chr3L	11864552	intron	CG44837 -	chr3L	11865211	intron	CG44837 -	chr3L	11865870	intron	CG44837 -	chr3L_8_11865001	chr3L_11865001	RAL-707
1038	chr3L	12874937	12874957	chr3L	12877229	12877249	jockey	6	2292	1.0	2.5	1.8	2.1	2312	chr3L	12874937	intergenic	not near genes	chr3L	12876093	intergenic	not near genes	chr3L	12877249	intergenic	not near genes	chr3L_6_12875001	chr3L_12875001	RAL-707
1040	chr3L	12919277	12919292	chr3L	12924761	12924776	Rt1c	6	5484	3.5	1.5	2.5	1.7	5499	chr3L	12919277	intergenic	not near genes	chr3L	12922026	intergenic	not near genes	chr3L	12924776	intergenic	not near genes	chr3L_6_12920001	chr3L_12920001	RAL-707
1041	chr3L	12957800	12957815	chr3L	12962282	12962297	copia	6	4482	2.5	5.0	3.8	1.2	4497	chr3L	12957800	intergenic	not near genes	chr3L	12960048	intergenic	not near genes	chr3L	12962297	intergenic	not near genes	chr3L_6_12960001	chr3L_12960001	RAL-707
1053	chr3L	13525155	13525185	chr3L	13532951	13532981	roo	9	7795	5.5	2.5	4.0	1.8	7826	chr3L	13525155	intergenic	not near genes	chr3L	13529068	intergenic	not near genes	chr3L	13532981	intergenic	not near genes	chr3L_9_13525001	chr3L_13525001	RAL-707
1064	chr3L	13804543	13804563	chr3L	13822829	13822849	roo	4	18286	4.0	3.5	3.8	0.8	18306	chr3L	13804543	intergenic	not near genes	chr3L	13813696	intergenic	not near genes	chr3L	13822849	intergenic	not near genes	chr3L_4_13810001	chr3L_13810001	RAL-707
1069	chr3L	14245570	14245589	chr3L	14245664	14245683	1360	7	94	2.0	2.0	2.0	2.3	113	chr3L	14245570	3` UTR	CR44561 -	chr3L	14245626	3` UTR	CR44561 -	chr3L	14245683	3` UTR	CR44561 -	chr3L_7_14245001	chr3L_14245001	RAL-707
1070	chr3L	14267373	14267395	chr3L	14271813	14271835	F-element	7	4440	2.5	3.5	3.0	1.8	4462	chr3L	14267373	intergenic	not near genes	chr3L	14269604	intergenic	not near genes	chr3L	14271835	intergenic	not near genes	chr3L_7_14265001	chr3L_14265001	RAL-707
1072	chr3L	14295982	14296012	chr3L	14296467	14296498	roo	11	485	6.0	3.0	4.5	2.0	516	chr3L	14295982	intron	fz +	chr3L	14296240	intron	fz +	chr3L	14296498	intron	fz +	chr3L_11_14295001	chr3L_14295001	RAL-707
1073	chr3L	14312023	14312058	chr3L	14316836	14316872	X-element	5	4814	1.5	3.5	2.5	1.4	4849	chr3L	14312023	exon	fz +	chr3L	14314448	intron	fz +	chr3L	14316872	intron	fz +	chr3L_5_14310001	chr3L_14310001	RAL-707
1077	chr3L	14468454	14468477	chr3L	14473660	14473681	copia	5	5206	1.5	4.5	3.0	1.2	5227	chr3L	14468454	intron	bbg -	chr3L	14471068	intron	bbg -	chr3L	14473681	intron	bbg -	chr3L_5_14470001	chr3L_14470001	RAL-707
1078	chr3L	14514694	14514696	chr3L	22908066	22908066	Stalker2	7	8393372	10.0	16.0	13.0	0.5	8393372	chr3L	14514694	intron	bbg -	chr3L	18711380	intergenic	not near genes	chr3L	22908066	intergenic	not near genes	chr3L_7_18710001	chr3L_18710001	RAL-707
1083	chr3L	14721181	14721210	chr3L	14723024	14723053	Rt1c	14	1842	3.0	4.5	3.8	2.9	1872	chr3L	14721181	intron	ome +	chr3L	14722117	intron	ome +	chr3L	14723053	intron	ome +	chr3L_14_14720001	chr3L_14720001	RAL-707
1088	chr3L	14954371	14954395	chr3L	14956040	14956060	transib2	4	1668	1.5	2.0	1.8	1.4	1689	chr3L	14954371	intergenic	not near genes	chr3L	14955216	intergenic	not near genes	chr3L	14956060	intergenic	not near genes	chr3L_4_14955001	chr3L_14955001	RAL-707
1097	chr3L	15423772	15423784	chr3L	15426616	15426628	opus	4	2844	2.5	2.5	2.5	1.1	2856	chr3L	15423772	intergenic	not near genes	chr3L	15425200	intergenic	not near genes	chr3L	15426628	intergenic	not near genes	chr3L_4_15425001	chr3L_15425001	RAL-707
1109	chr3L	15899228	15899260	chr3L	15899790	15899827	jockey	8	566	1.5	3.5	2.5	2.3	599	chr3L	15899228	intergenic	pHCl -	chr3L	15899528	intergenic	pHCl -	chr3L	15899827	intergenic	sff -	chr3L_8_15895001	chr3L_15895001	RAL-707
1113	chr3L	16184110	16184140	chr3L	16188929	16188959	X-element	7	4819	4.0	1.0	2.5	2.0	4849	chr3L	16184110	intergenic	not near genes	chr3L	16186534	intergenic	not near genes	chr3L	16188959	intergenic	not near genes	chr3L_7_16185001	chr3L_16185001	RAL-707
1119	chr3L	16443849	16443877	chr3L	16446189	16446217	Doc	12	2340	2.0	2.0	2.0	4.0	2368	chr3L	16443849	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445033	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446217	intron,intron	CG33158 +,dsx-c73A -	chr3L_12_16445001	chr3L_16445001	RAL-707
1122	chr3L	16493979	16493991	chr3L	16494496	16494508	jockey	5	517	7.5	4.0	5.8	0.7	529	chr3L	16493979	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494244	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494508	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_5_16490001	chr3L_16490001	RAL-707
1126	chr3L	16616511	16616540	chr3L	16621839	16621868	297	8	5328	2.0	2.0	2.0	2.7	5357	chr3L	16616511	3` UTR	Abl -	chr3L	16619190	3` UTR	Abl -	chr3L	16621868	3` UTR	Abl -	chr3L_8_16615001	chr3L_16615001	RAL-707
1135	chr3L	16945726	16945761	chr3L	16954878	16954914	roo	13	9153	3.5	0.0	1.8	4.6	9188	chr3L	16945726	exon	Obp73a +	chr3L	16950320	intergenic	not near genes	chr3L	16954914	5` UTR	Nc73EF +	chr3L_13_16950001	chr3L_16950001	RAL-707
1142	chr3L	17516979	17517013	chr3L	17524537	17524568	412	7	7557	4.0	3.0	3.5	1.6	7589	chr3L	17516979	intron	CG7564 +	chr3L	17520774	intron	CG7564 +	chr3L	17524568	3` UTR	CG7564 +	chr3L_7_17520001	chr3L_17520001	RAL-707
1145	chr3L	17730854	17730882	chr3L	17738184	17738212	mdg1	7	7330	2.0	0.0	1.0	3.5	7358	chr3L	17730854	intron	Ccn +	chr3L	17734533	intron	Ccn +	chr3L	17738212	intron	Ccn +	chr3L_7_17730001	chr3L_17730001	RAL-707
1147	chr3L	17799812	17799838	chr3L	17801598	17801625	S-element	4	1787	3.0	0.5	1.8	1.4	1813	chr3L	17799812	intron	NUCB1 -	chr3L	17800718	intron	NUCB1 -	chr3L	17801625	intron	NUCB1 -	chr3L_4_17800001	chr3L_17800001	RAL-707
1157	chr3L	18506137	18506161	chr3L	18509600	18509624	F-element	4	3463	1.5	3.5	2.5	1.1	3487	chr3L	18506137	intergenic	not near genes	chr3L	18507880	intergenic	not near genes	chr3L	18509624	intergenic	not near genes	chr3L_4_18505001	chr3L_18505001	RAL-707
1158	chr3L	18528626	18528657	chr3L	18537787	18537818	roo	7	9160	2.5	3.0	2.8	1.8	9192	chr3L	18528626	intergenic	not near genes	chr3L	18533222	intergenic	not near genes	chr3L	18537818	intergenic	not near genes	chr3L_7_18530001	chr3L_18530001	RAL-707
1160	chr3L	18593955	18593969	chr3L	18595935	18595949	Doc	4	1980	2.5	0.0	1.2	1.8	1994	chr3L	18593955	intergenic	term -	chr3L	18594952	intergenic	not near genes	chr3L	18595949	intergenic	CR45389 +	chr3L_4_18590001	chr3L_18590001	RAL-707
1166	chr3L	18710761	18710791	chr3L	18718713	18718743	Stalker2	5	7952	2.0	1.5	1.8	1.8	7982	chr3L	18710761	intergenic	not near genes	chr3L	18714752	intergenic	not near genes	chr3L	18718743	intergenic	not near genes	chr3L_5_18710001	chr3L_18710001	RAL-707
1169	chr3L	18772408	18772431	chr3L	18781089	18781112	roo	8	8681	0.5	2.5	1.5	3.2	8704	chr3L	18772408	intron	ftz-f1 -	chr3L	18776760	intron	ftz-f1 -	chr3L	18781112	intron	ftz-f1 -	chr3L_8_18775001	chr3L_18775001	RAL-707
1176	chr3L	19008856	19008872	chr3L	19009192	19009210	jockey	6	338	1.5	3.0	2.2	1.9	354	chr3L	19008856	intron	nkd -	chr3L	19009033	intron	nkd -	chr3L	19009210	intron	nkd -	chr3L_6_19005001	chr3L_19005001	RAL-707
1178	chr3L	19115648	19115669	chr3L	19115825	19115847	BS	4	177	2.5	3.0	2.8	1.1	199	chr3L	19115648	intron	CG14082 -	chr3L	19115748	intron	CG14082 -	chr3L	19115847	intron	CG14082 -	chr3L_4_19115001	chr3L_19115001	RAL-707
1179	chr3L	19117045	19117073	chr3L	19124492	19124519	mdg1	9	7447	4.0	5.0	4.5	1.6	7474	chr3L	19117045	intron	CG14082 -	chr3L	19120782	intron	CG14082 -	chr3L	19124519	intron	CG14082 -	chr3L_9_19120001	chr3L_19120001	RAL-707
1182	chr3L	19208060	19208091	chr3L	19209432	19209465	Doc	6	1374	2.0	1.5	1.8	2.1	1405	chr3L	19208060	intron	fz2 -	chr3L	19208762	intron	fz2 -	chr3L	19209465	intron	fz2 -	chr3L_6_19205001	chr3L_19205001	RAL-707
1192	chr3L	19848505	19848535	chr3L	19857695	19857725	roo	7	9190	3.5	3.5	3.5	1.6	9220	chr3L	19848505	intron	Papss +	chr3L	19853115	intron	Papss +	chr3L	19857725	intron	Papss +	chr3L_7_19850001	chr3L_19850001	RAL-707
1196	chr3L	20113657	20113689	chr3L	20122914	20122946	roo	4	9257	3.5	3.0	3.2	1.0	9289	chr3L	20113657	intergenic	not near genes	chr3L	20118302	intergenic	not near genes	chr3L	20122946	intergenic	not near genes	chr3L_4_20115001	chr3L_20115001	RAL-707
1199	chr3L	20257334	20257362	chr3L	20258453	20258482	pogo	19	1120	1.0	3.5	2.2	5.9	1148	chr3L	20257334	intron	rdgC +	chr3L	20257908	intron	rdgC +	chr3L	20258482	intron	rdgC +	chr3L_19_20255001	chr3L_20255001	RAL-707
1200	chr3L	20476753	20476769	chr3L	20484352	20484368	springer	6	7599	4.5	2.0	3.2	1.4	7615	chr3L	20476753	3` UTR	isoQC +	chr3L	20480560	intergenic	not near genes	chr3L	20484368	3` UTR	ZnT77C -	chr3L_6_20480001	chr3L_20480001	RAL-707
1201	chr3L	20590071	20590097	chr3L	20590610	20590635	412	4	537	3.5	2.5	3.0	1.0	564	chr3L	20590071	intergenic	not near genes	chr3L	20590353	intergenic	not near genes	chr3L	20590635	intergenic	not near genes	chr3L_4_20590001	chr3L_20590001	RAL-707
1204	chr3L	20821291	20821309	chr3L	20824902	20824920	NOF	4	3611	1.5	4.0	2.8	1.1	3629	chr3L	20821291	intron	Pka-R1 +	chr3L	20823106	intron	Pka-R1 +	chr3L	20824920	intron	Pka-R1 +	chr3L_4_20820001	chr3L_20820001	RAL-707
1211	chr3L	21014915	21014947	chr3L	21023396	21023428	Tirant	6	8480	3.5	3.0	3.2	1.4	8513	chr3L	21014915	intron	skd -	chr3L	21019172	intron	skd -	chr3L	21023428	intron	skd -	chr3L_6_21015001	chr3L_21015001	RAL-707
1215	chr3L	21151867	21151887	chr3L	21156951	21156971	flea	6	5084	4.5	2.5	3.5	1.3	5104	chr3L	21151867	intron	Ac78C -	chr3L	21154419	intron	Ac78C -	chr3L	21156971	intron	Ac78C -	chr3L_6_21150001	chr3L_21150001	RAL-707
1216	chr3L	21243749	21243757	chr3L	21251311	21251320	412	6	7562	4.5	2.5	3.5	1.3	7571	chr3L	21243749	intron	Eip78C +	chr3L	21247534	intron	Eip78C +	chr3L	21251320	intron	Eip78C +	chr3L_6_21245001	chr3L_21245001	RAL-707
1217	chr3L	21306151	21306178	chr3L	21315310	21315337	roo	9	9159	1.0	2.5	1.8	3.2	9186	chr3L	21306151	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310744	intron	Pc -	chr3L	21315337	3` UTR	Pc -	chr3L_9_21310001	chr3L_21310001	RAL-707
1220	chr3L	21498839	21498870	chr3L	21500473	21500506	1360	8	1636	3.0	5.0	4.0	1.6	1667	chr3L	21498839	intron	Glg1 -	chr3L	21499672	intron	Glg1 -	chr3L	21500506	intron	Glg1 -	chr3L_8_21495001	chr3L_21495001	RAL-707
1223	chr3L	21749319	21749345	chr3L	21754479	21754505	Doc	8	5160	1.5	3.5	2.5	2.3	5186	chr3L	21749319	intron	Syn1 -	chr3L	21751912	intron	Syn1 -	chr3L	21754505	intron	Syn1 -	chr3L_8_21750001	chr3L_21750001	RAL-707
1234	chr3L	22099678	22099709	chr3L	22105864	22105895	3S18	7	6186	3.5	4.0	3.8	1.5	6217	chr3L	22099678	intergenic	not near genes	chr3L	22102786	intergenic	not near genes	chr3L	22105895	intergenic	not near genes	chr3L_7_22100001	chr3L_22100001	RAL-707
1244	chr3L	22555775	22555793	chr3L	22563243	22563263	blood	4	7469	2.0	1.0	1.5	1.6	7488	chr3L	22555775	intergenic	not near genes	chr3L	22559519	intergenic	not near genes	chr3L	22563263	intergenic	not near genes	chr3L_4_22555001	chr3L_22555001	RAL-707
1245	chr3L	22577614	22577644	chr3L	22582402	22582432	Doc	9	4788	2.0	6.5	4.2	1.7	4818	chr3L	22577614	intergenic	not near genes	chr3L	22580023	intergenic	not near genes	chr3L	22582432	3` UTR	CG14459 -	chr3L_9_22580001	chr3L_22580001	RAL-707
1247	chr3L	22617188	22617223	chr3L	22624640	22624675	blood	14	7452	2.5	1.5	2.0	4.7	7487	chr3L	22617188	intron	CG14459 -	chr3L	22620932	intron	CG14459 -	chr3L	22624675	intron	CG14459 -	chr3L_14_22620001	chr3L_22620001	RAL-707
1249	chr3L	22761385	22761419	chr3L	22766819	22766853	Ivk	13	5434	3.0	1.0	2.0	4.3	5468	chr3L	22761385	intron	SPoCk +	chr3L	22764119	intron	SPoCk +	chr3L	22766853	intron	SPoCk +	chr3L_13_22760001	chr3L_22760001	RAL-707
1255	chr3L	22989862	22989887	chr3L	22996835	22996861	297	7	6974	2.0	2.5	2.2	2.2	6999	chr3L	22989862	intergenic	not near genes	chr3L	22993362	intergenic	not near genes	chr3L	22996861	intergenic	not near genes	chr3L_7_22990001	chr3L_22990001	RAL-707
1258	chr3L	23536254	23536259	chr3L	23797106	23797110	gypsy8	4	260852	19.0	10.0	14.5	0.3	260856	chr3L	23536254	intergenic	not near genes	chr3L	23666682	intron	AGO3 +	chr3L	23797110	intergenic	not near genes	chr3L_4_23665001	chr3L_23665001	RAL-707
1263	chr3L	24012411	24012431	chr3L	24020752	24020772	roo	5	8341	3.5	0.5	2.0	1.7	8361	chr3L	24012411	intergenic	not near genes	chr3L	24016592	intergenic	not near genes	chr3L	24020772	intergenic	not near genes	chr3L_5_24015001	chr3L_24015001	RAL-707
1264	chr3L	24168791	24168804	chr3L	24176119	24176129	ZAM	7	7327	5.0	2.0	3.5	1.6	7338	chr3L	24168791	intron	Snap25 +	chr3L	24172460	intron	Snap25 +	chr3L	24176129	intron	Snap25 +	chr3L_7_24170001	chr3L_24170001	RAL-707
1265	chr3L	24791902	24791925	chr3L	24796681	24796704	Doc	4	4779	0.0	1.5	0.8	2.2	4802	chr3L	24791902	intergenic	not near genes	chr3L	24794303	intergenic	not near genes	chr3L	24796704	intergenic	not near genes	chr3L_4_24790001	chr3L_24790001	RAL-707
1271	chr3L	25628501	25628528	chr3L	25633272	25633299	F-element	9	4771	2.0	3.5	2.8	2.4	4798	chr3L	25628501	intron	CG41343 -	chr3L	25630900	intron	CG41343 -	chr3L	25633299	intron	CG41343 -	chr3L_9_25630001	chr3L_25630001	RAL-707
1274	chr3L	24566080	24566085	chr3L	25889009	25889016	micropia	4	1322930	2.5	12.0	7.2	0.5	1322936	chr3L	24566080	intergenic	not near genes	chr3L	25227548	intergenic	not near genes	chr3L	25889016	intron	CG40178 -	chr3L_4_25225001	chr3L_25225001	RAL-707
1276	chr3L	22908067	22908067	chr3L	26014451	26014452	Porto1	4	3106384	15.5	4.5	10.0	0.4	3106385	chr3L	22908067	intergenic	not near genes	chr3L	24461260	intergenic	not near genes	chr3L	26014452	intergenic	CG40178 -	chr3L_4_24460001	chr3L_24460001	RAL-707
1280	chr3L	22908066	22908067	chr3L	27698695	27698695	micropia	5	4790628	15.5	2.5	9.0	0.5	4790629	chr3L	22908066	intergenic	not near genes	chr3L	25303380	intron	CG40467 -	chr3L	27698695	intergenic	not near genes	chr3L_5_25300001	chr3L_25300001	RAL-707
1281	chr3L	27980726	27980728	chr3L	27985524	27985526	Doc	5	4798	0.0	5.0	2.5	1.4	4800	chr3L	27980726	intron	CG17514 -	chr3L	27983126	intron	CG17514 -	chr3L	27985526	intron	CG17514 -	chr3L_5_27980001	chr3L_27980001	RAL-707
1285	chr3R	1511854	1511859	chr3R	2516774	2516781	297	5	1004921	5.0	11.5	8.2	0.5	1004927	chr3R	1511854	intergenic	not near genes	chr3R	2014318	intergenic	not near genes	chr3R	2516781	intergenic	not near genes	chr3R_5_2010001	chr3R_2010001	RAL-707
1288	chr3R	4206071	4206100	chr3R	4211644	4211675	mdg3	7	5575	2.0	1.0	1.5	2.8	5604	chr3R	4206071	intron	CG14636 -	chr3R	4208873	intron	CG14636 -	chr3R	4211675	intron	CG14636 -	chr3R_7_4205001	chr3R_4205001	RAL-707
1289	chr3R	4366756	4366781	chr3R	4375139	4375162	roo	7	8383	3.5	0.5	2.0	2.3	8406	chr3R	4366756	3` UTR	CG1090 +	chr3R	4370959	intergenic	not near genes	chr3R	4375162	5` UTR	CR44922 +	chr3R_7_4370001	chr3R_4370001	RAL-707
1290	chr3R	4408413	4408439	chr3R	4412717	4412743	Juan	6	4304	4.0	1.0	2.5	1.7	4330	chr3R	4408413	intron	CG32944 -	chr3R	4410578	intron	CG32944 -	chr3R	4412743	intron	CG32944 -	chr3R_6_4410001	chr3R_4410001	RAL-707
1294	chr3R	4753241	4753271	chr3R	4757544	4757574	F-element	13	4303	5.5	4.0	4.8	2.2	4333	chr3R	4753241	intron,intron	atms +,CG44098 -	chr3R	4755408	intron,intron	atms +,CG44098 -	chr3R	4757574	intron,exon	atms +,CG44098 -	chr3R_13_4755001	chr3R_4755001	RAL-707
1296	chr3R	4887479	4887509	chr3R	4894856	4894886	rover	8	7376	2.0	2.0	2.0	2.7	7407	chr3R	4887479	intergenic	not near genes	chr3R	4891182	intergenic	not near genes	chr3R	4894886	intergenic	not near genes	chr3R_8_4890001	chr3R_4890001	RAL-707
1302	chr3R	5045846	5045872	chr3R	5052948	5052974	HMS-Beagle	4	7102	3.0	1.0	2.0	1.3	7128	chr3R	5045846	intron	CR43635 -	chr3R	5049410	intergenic	not near genes	chr3R	5052974	intergenic	CR45588 -	chr3R_4_5045001	chr3R_5045001	RAL-707
1304	chr3R	5067980	5068012	chr3R	5073497	5073529	mdg3	15	5517	1.5	2.0	1.8	5.4	5549	chr3R	5067980	intergenic	not near genes	chr3R	5070754	intergenic	not near genes	chr3R	5073529	intergenic	not near genes	chr3R_15_5070001	chr3R_5070001	RAL-707
1309	chr3R	5338396	5338428	chr3R	5343573	5343604	Rt1c	14	5176	4.0	6.0	5.0	2.3	5208	chr3R	5338396	intron	mtd -	chr3R	5341000	intron	mtd -	chr3R	5343604	intron	mtd -	chr3R_14_5340001	chr3R_5340001	RAL-707
1311	chr3R	5445964	5445984	chr3R	5452424	5452444	Burdock	7	6460	3.0	3.0	3.0	1.8	6480	chr3R	5445964	intron	CG14669 +	chr3R	5449204	intron	CG14669 +	chr3R	5452444	intron	CG14669 +	chr3R_7_5445001	chr3R_5445001	RAL-707
1314	chr3R	5746013	5746045	chr3R	5746254	5746286	pogo	6	241	3.5	4.5	4.0	1.2	273	chr3R	5746013	3` UTR	Madm +	chr3R	5746150	3` UTR	Madm +	chr3R	5746286	3` UTR	Madm +	chr3R_6_5745001	chr3R_5745001	RAL-707
1315	chr3R	5747010	5747046	chr3R	5753201	5753237	diver	5	6191	1.0	1.5	1.2	2.3	6227	chr3R	5747010	intergenic	Madm +	chr3R	5750124	intergenic	not near genes	chr3R	5753237	intergenic	CG2091 -	chr3R_5_5750001	chr3R_5750001	RAL-707
1320	chr3R	5809119	5809141	chr3R	5809360	5809380	pogo	6	241	3.0	2.5	2.8	1.6	261	chr3R	5809119	3` UTR	CG11000 +	chr3R	5809250	3` UTR	CG11000 +	chr3R	5809380	3` UTR	CG11000 +	chr3R_6_5805001	chr3R_5805001	RAL-707
1321	chr3R	5822383	5822412	chr3R	5823550	5823578	1360	7	1167	3.5	4.5	4.0	1.4	1195	chr3R	5822383	3` UTR	CG2023 -	chr3R	5822980	3` UTR	CG2023 -	chr3R	5823578	3` UTR	CG2023 -	chr3R_7_5820001	chr3R_5820001	RAL-707
1322	chr3R	5927561	5927587	chr3R	5927800	5927827	pogo	11	240	3.5	2.5	3.0	2.8	266	chr3R	5927561	intron	CG34113 -	chr3R	5927694	intron	CG34113 -	chr3R	5927827	intron	CG34113 -	chr3R_11_5925001	chr3R_5925001	RAL-707
1327	chr3R	6015971	6015987	chr3R	6024470	6024488	Tirant	8	8501	4.0	0.0	2.0	2.7	8517	chr3R	6015971	intergenic	not near genes	chr3R	6020230	intergenic	not near genes	chr3R	6024488	intergenic	not near genes	chr3R_8_6020001	chr3R_6020001	RAL-707
1330	chr3R	6121174	6121185	chr3R	6121392	6121403	BS	5	218	0.0	2.5	1.2	2.3	229	chr3R	6121174	intergenic	not near genes	chr3R	6121288	intergenic	not near genes	chr3R	6121403	intergenic	not near genes	chr3R_5_6120001	chr3R_6120001	RAL-707
1331	chr3R	6158513	6158536	chr3R	6167095	6167118	Tirant	10	8582	2.5	6.5	4.5	1.8	8605	chr3R	6158513	intergenic	not near genes	chr3R	6162816	intergenic	not near genes	chr3R	6167118	intergenic	CG1077 +	chr3R_10_6160001	chr3R_6160001	RAL-707
1333	chr3R	6175173	6175199	chr3R	6182445	6182470	HMS-Beagle2	7	7272	3.0	1.0	2.0	2.3	7297	chr3R	6175173	intergenic	Osi1 +	chr3R	6178822	intron	CR45194 +	chr3R	6182470	intergenic	CR45194 +	chr3R_7_6175001	chr3R_6175001	RAL-707
1336	chr3R	6510031	6510053	chr3R	6515112	6515134	jockey	5	5081	1.5	1.5	1.5	2.0	5103	chr3R	6510031	intergenic	not near genes	chr3R	6512582	intergenic	not near genes	chr3R	6515134	intergenic	not near genes	chr3R_5_6510001	chr3R_6510001	RAL-707
1338	chr3R	6737504	6737529	chr3R	6739291	6739314	Doc	12	1787	1.0	4.0	2.5	3.4	1810	chr3R	6737504	intron	pb -	chr3R	6738409	intron	pb -	chr3R	6739314	intron	pb -	chr3R_12_6735001	chr3R_6735001	RAL-707
1359	chr3R	7694575	7694610	chr3R	7713636	7713671	invader3	5	19061	2.5	1.0	1.8	1.8	19096	chr3R	7694575	3` UTR	Nlg1 +	chr3R	7704123	intergenic	not near genes	chr3R	7713671	intergenic	not near genes	chr3R_5_7700001	chr3R_7700001	RAL-707
1360	chr3R	7729472	7729497	chr3R	7737410	7737435	Stalker2	10	7938	2.0	2.5	2.2	3.1	7963	chr3R	7729472	intergenic	not near genes	chr3R	7733454	intergenic	not near genes	chr3R	7737435	intergenic	not near genes	chr3R_10_7730001	chr3R_7730001	RAL-707
1363	chr3R	7973321	7973344	chr3R	7974383	7974406	1360	5	1062	0.5	6.5	3.5	1.1	1085	chr3R	7973321	intergenic	not near genes	chr3R	7973864	intergenic	not near genes	chr3R	7974406	intergenic	CD98hc -	chr3R_5_7970001	chr3R_7970001	RAL-707
1366	chr3R	8101764	8101790	chr3R	8104848	8104874	G2	7	3084	3.5	2.0	2.8	1.8	3110	chr3R	8101764	exon	CG7900 +	chr3R	8103319	intron	CG7900 +	chr3R	8104874	3` UTR	CG7900 +	chr3R_7_8100001	chr3R_8100001	RAL-707
1368	chr3R	8207569	8207582	chr3R	8208413	8208426	F-element	6	844	4.5	7.0	5.8	0.9	857	chr3R	8207569	intergenic	not near genes	chr3R	8207998	intergenic	not near genes	chr3R	8208426	intergenic	not near genes	chr3R_6_8205001	chr3R_8205001	RAL-707
1371	chr3R	8403009	8403035	chr3R	8412175	8412201	roo	11	9165	4.0	6.5	5.2	1.8	9192	chr3R	8403009	intron	CG45263 -	chr3R	8407605	intron	CG45263 -	chr3R	8412201	intron	CG45263 -	chr3R_11_8405001	chr3R_8405001	RAL-707
1374	chr3R	8570476	8570509	chr3R	8575112	8575144	HMS-Beagle	7	4636	2.0	4.5	3.2	1.7	4668	chr3R	8570476	intergenic	not near genes	chr3R	8572810	intergenic	not near genes	chr3R	8575144	intergenic	not near genes	chr3R_7_8570001	chr3R_8570001	RAL-707
1375	chr3R	8601770	8601798	chr3R	8610922	8610950	roo	6	9153	2.5	4.5	3.5	1.3	9180	chr3R	8601770	intron	5-HT2B +	chr3R	8606360	intron	5-HT2B +	chr3R	8610950	intron	5-HT2B +	chr3R_6_8605001	chr3R_8605001	RAL-707
1377	chr3R	8707362	8707384	chr3R	8709803	8709825	jockey	6	2441	4.0	5.5	4.8	1.0	2463	chr3R	8707362	intergenic	not near genes	chr3R	8708594	intergenic	not near genes	chr3R	8709825	intergenic	not near genes	chr3R_6_8705001	chr3R_8705001	RAL-707
1380	chr3R	8894870	8894906	chr3R	8896026	8896062	1360	7	1156	3.5	1.5	2.5	2.0	1192	chr3R	8894870	intron	pyd -	chr3R	8895466	intron	pyd -	chr3R	8896062	intron	pyd -	chr3R_7_8895001	chr3R_8895001	RAL-707
1388	chr3R	9319572	9319605	chr3R	9320007	9320040	jockey	10	434	3.5	3.5	3.5	2.2	468	chr3R	9319572	intron	CG8861 -	chr3R	9319806	intron	CG8861 -	chr3R	9320040	intron	CG8861 -	chr3R_10_9315001	chr3R_9315001	RAL-707
1389	chr3R	9361815	9361828	chr3R	9362056	9362069	pogo	6	241	1.5	1.0	1.2	2.7	254	chr3R	9361815	3` UTR	CG45050 +	chr3R	9361942	3` UTR	CG45050 +	chr3R	9362069	3` UTR	CG45050 +	chr3R_6_9360001	chr3R_9360001	RAL-707
1395	chr3R	9699978	9700000	chr3R	9700067	9700089	1360	5	89	3.5	4.5	4.0	1.0	111	chr3R	9699978	intron	Unc-115a -	chr3R	9700034	intron	Unc-115a -	chr3R	9700089	intron	Unc-115a -	chr3R_5_9700001	chr3R_9700001	RAL-707
1413	chr3R	10957870	10957880	chr3R	10963259	10963267	Rt1c	4	5388	4.5	4.5	4.5	0.7	5397	chr3R	10957870	intergenic	not near genes	chr3R	10960568	intergenic	not near genes	chr3R	10963267	intergenic	not near genes	chr3R_4_10960001	chr3R_10960001	RAL-707
1422	chr3R	11379239	11379269	chr3R	11388394	11388424	roo	10	9155	2.0	2.5	2.2	3.1	9185	chr3R	11379239	intron	pros +	chr3R	11383832	intron	pros +	chr3R	11388424	intron	pros +	chr3R_10_11380001	chr3R_11380001	RAL-707
1429	chr3R	11841064	11841095	chr3R	11846255	11846286	BS	12	5191	1.5	2.0	1.8	4.3	5222	chr3R	11841064	intron	CG6959 -	chr3R	11843675	intron	CG6959 -	chr3R	11846286	intron	CG6959 -	chr3R_12_11840001	chr3R_11840001	RAL-707
1433	chr3R	12022887	12022910	chr3R	12025063	12025087	pogo	8	2177	3.5	3.5	3.5	1.8	2200	chr3R	12022887	intergenic	not near genes	chr3R	12023987	intergenic	not near genes	chr3R	12025087	intergenic	not near genes	chr3R_8_12020001	chr3R_12020001	RAL-707
1444	chr3R	12920151	12920186	chr3R	12925354	12925389	copia	9	5203	2.5	2.0	2.2	2.8	5238	chr3R	12920151	intron	beat-Vb +	chr3R	12922770	intron	beat-Vb +	chr3R	12925389	intron	beat-Vb +	chr3R_9_12920001	chr3R_12920001	RAL-707
1449	chr3R	13143039	13143066	chr3R	13148615	13148642	mdg3	8	5576	4.5	4.5	4.5	1.5	5603	chr3R	13143039	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145840	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148642	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_8_13145001	chr3R_13145001	RAL-707
1458	chr3R	13314093	13314123	chr3R	13318880	13318911	Doc	12	4788	2.0	1.0	1.5	4.8	4818	chr3R	13314093	intergenic	not near genes	chr3R	13316502	intergenic	not near genes	chr3R	13318911	intergenic	CG45080 -	chr3R_12_13315001	chr3R_13315001	RAL-707
1485	chr3R	14180811	14180828	chr3R	14185576	14185593	F-element	7	4764	5.0	0.0	2.5	2.0	4782	chr3R	14180811	intron	Dop1R1 -	chr3R	14183202	intron	Dop1R1 -	chr3R	14185593	intron	Dop1R1 -	chr3R_7_14180001	chr3R_14180001	RAL-707
1488	chr3R	14246400	14246415	chr3R	14247896	14247911	jockey	6	1495	0.5	3.5	2.0	2.0	1511	chr3R	14246400	intergenic	not near genes	chr3R	14247156	intergenic	not near genes	chr3R	14247911	intergenic	not near genes	chr3R_6_14245001	chr3R_14245001	RAL-707
1502	chr3R	15041429	15041459	chr3R	15045197	15045226	Doc	7	3768	1.0	1.0	1.0	3.5	3797	chr3R	15041429	intergenic	not near genes	chr3R	15043328	intergenic	not near genes	chr3R	15045226	intergenic	not near genes	chr3R_7_15040001	chr3R_15040001	RAL-707
1504	chr3R	15079806	15079837	chr3R	15080047	15080078	pogo	6	241	1.5	2.5	2.0	2.0	272	chr3R	15079806	3` UTR	CG6966 -	chr3R	15079942	3` UTR	CG6966 -	chr3R	15080078	3` UTR	CG6966 -	chr3R_6_15075001	chr3R_15075001	RAL-707
1505	chr3R	15162552	15162579	chr3R	15167319	15167346	F-element	8	4766	3.0	4.5	3.8	1.7	4794	chr3R	15162552	intron	Gyc88E +	chr3R	15164949	intron	Gyc88E +	chr3R	15167346	intron	Gyc88E +	chr3R_8_15160001	chr3R_15160001	RAL-707
1511	chr3R	15601165	15601194	chr3R	15608687	15608716	412	11	7522	3.0	2.5	2.8	2.9	7551	chr3R	15601165	intergenic	not near genes	chr3R	15604940	intergenic	not near genes	chr3R	15608716	intergenic	not near genes	chr3R_11_15600001	chr3R_15600001	RAL-707
1512	chr3R	15618737	15618756	chr3R	15626210	15626230	blood	6	7474	1.5	3.0	2.2	1.9	7493	chr3R	15618737	intergenic	not near genes	chr3R	15622484	intergenic	not near genes	chr3R	15626230	intergenic	not near genes	chr3R_6_15620001	chr3R_15620001	RAL-707
1523	chr3R	16756319	16756352	chr3R	16762510	16762543	diver	7	6191	1.0	2.0	1.5	2.8	6224	chr3R	16756319	intron	bxd -	chr3R	16759431	intron	bxd -	chr3R	16762543	intron	bxd -	chr3R_7_16755001	chr3R_16755001	RAL-707
1528	chr3R	17346696	17346718	chr3R	17348259	17348279	F-element	4	1562	0.5	6.5	3.5	0.9	1583	chr3R	17346696	intron	beat-IIa -	chr3R	17347488	intron	beat-IIa -	chr3R	17348279	intron	beat-IIa -	chr3R_4_17345001	chr3R_17345001	RAL-707
1537	chr3R	17591293	17591319	chr3R	17591729	17591755	F-element	8	434	1.5	2.0	1.8	2.9	462	chr3R	17591293	intergenic	not near genes	chr3R	17591524	intergenic	not near genes	chr3R	17591755	intergenic	not near genes	chr3R_8_17590001	chr3R_17590001	RAL-707
1538	chr3R	17638323	17638350	chr3R	17638809	17638834	roo	5	485	0.0	2.0	1.0	2.5	511	chr3R	17638323	intron	CG43175 +	chr3R	17638578	intron	CG43175 +	chr3R	17638834	intron,intron	CG43175 +,CR45222 +	chr3R_5_17635001	chr3R_17635001	RAL-707
1543	chr3R	17925857	17925886	chr3R	17927324	17927353	hobo	10	1467	4.5	6.5	5.5	1.5	1496	chr3R	17925857	intron	cpo +	chr3R	17926605	intron	cpo +	chr3R	17927353	intron	cpo +	chr3R_10_17925001	chr3R_17925001	RAL-707
1546	chr3R	18061581	18061612	chr3R	18063149	18063180	F-element	6	1568	1.5	1.0	1.2	2.7	1599	chr3R	18061581	intergenic	not near genes	chr3R	18062380	intergenic	not near genes	chr3R	18063180	intergenic	not near genes	chr3R_6_18060001	chr3R_18060001	RAL-707
1556	chr3R	18606503	18606531	chr3R	18610735	18610763	F-element	6	4232	1.0	2.0	1.5	2.4	4260	chr3R	18606503	intron,intron	qin +,CG14304 -	chr3R	18608633	intron,intron	qin +,CG14304 -	chr3R	18610763	intron,intron	qin +,CG14304 -	chr3R_6_18605001	chr3R_18605001	RAL-707
1592	chr3R	20156698	20156720	chr3R	20165868	20165890	roo	7	9170	3.0	3.0	3.0	1.8	9192	chr3R	20156698	intergenic	not near genes	chr3R	20161294	intergenic	not near genes	chr3R	20165890	intergenic	not near genes	chr3R_7_20160001	chr3R_20160001	RAL-707
1596	chr3R	20266517	20266536	chr3R	20272987	20273007	Burdock	5	6471	4.5	2.5	3.5	1.1	6490	chr3R	20266517	intron	cic +	chr3R	20269762	intron	cic +	chr3R	20273007	intron	cic +	chr3R_5_20265001	chr3R_20265001	RAL-707
1599	chr3R	20331002	20331019	chr3R	20331488	20331505	roo	7	486	3.5	4.0	3.8	1.5	503	chr3R	20331002	intergenic	Sirt2 +	chr3R	20331254	intergenic	Sirt2 +	chr3R	20331505	intergenic	not near genes	chr3R_7_20330001	chr3R_20330001	RAL-707
1632	chr3R	21609005	21609027	chr3R	21611638	21611655	NOF	6	2632	5.0	3.0	4.0	1.2	2650	chr3R	21609005	intron	InR -	chr3R	21610330	intron	InR -	chr3R	21611655	intron	InR -	chr3R_6_21610001	chr3R_21610001	RAL-707
1636	chr3R	21761124	21761154	chr3R	21768516	21768544	mdg1	12	7391	4.0	5.0	4.5	2.2	7420	chr3R	21761124	exon	CG42335 +	chr3R	21764834	intron	CG42335 +	chr3R	21768544	exon	CG42335 +	chr3R_12_21760001	chr3R_21760001	RAL-707
1654	chr3R	22239491	22239519	chr3R	22248551	22248579	roo	5	9060	2.0	3.5	2.8	1.3	9088	chr3R	22239491	intron	SKIP +	chr3R	22244035	intron	SKIP +	chr3R	22248579	intron	SKIP +	chr3R_5_22240001	chr3R_22240001	RAL-707
1657	chr3R	22450547	22450574	chr3R	22453187	22453214	NOF	10	2640	2.5	2.5	2.5	2.9	2667	chr3R	22450547	intron	CG34376 +	chr3R	22451880	intron	CG34376 +	chr3R	22453214	intron	CG34376 +	chr3R_10_22450001	chr3R_22450001	RAL-707
1678	chr3R	23558400	23558424	chr3R	23560181	23560205	Bari1	11	1781	1.0	4.0	2.5	3.1	1805	chr3R	23558400	intron	beat-IV +	chr3R	23559302	intron	beat-IV +	chr3R	23560205	intron	beat-IV +	chr3R_11_23555001	chr3R_23555001	RAL-707
1681	chr3R	23684696	23684722	chr3R	23685182	23685208	roo	8	485	3.5	3.5	3.5	1.8	512	chr3R	23684696	exon	CG18754 +	chr3R	23684952	intron	CG18754 +	chr3R	23685208	exon	CG18754 +	chr3R_8_23680001	chr3R_23680001	RAL-707
1685	chr3R	23835405	23835424	chr3R	23844555	23844574	roo	7	9150	4.5	3.0	3.8	1.5	9169	chr3R	23835405	intron	CG34355 +	chr3R	23839990	intron	CG34355 +	chr3R	23844574	intron	CG34355 +	chr3R_7_23835001	chr3R_23835001	RAL-707
1689	chr3R	24072087	24072122	chr3R	24072523	24072560	jockey	9	437	2.0	7.0	4.5	1.6	473	chr3R	24072087	intron	4EHP -	chr3R	24072324	intron	4EHP -	chr3R	24072560	intron	4EHP -	chr3R_9_24070001	chr3R_24070001	RAL-707
1690	chr3R	24076918	24076948	chr3R	24078385	24078415	hobo	8	1467	4.5	3.5	4.0	1.6	1497	chr3R	24076918	intron	4EHP -	chr3R	24077666	intron	4EHP -	chr3R	24078415	intron	4EHP -	chr3R_8_24075001	chr3R_24075001	RAL-707
1693	chr3R	24207228	24207245	chr3R	24212304	24212321	flea	4	5076	4.0	8.0	6.0	0.6	5093	chr3R	24207228	intron	twin -	chr3R	24209774	intron	twin -	chr3R	24212321	intron	twin -	chr3R_4_24205001	chr3R_24205001	RAL-707
1696	chr3R	24493274	24493310	chr3R	24493503	24493539	BS	10	229	2.0	3.5	2.8	2.6	265	chr3R	24493274	intergenic	not near genes	chr3R	24493406	intergenic	not near genes	chr3R	24493539	intergenic	not near genes	chr3R_10_24490001	chr3R_24490001	RAL-707
1701	chr3R	24730093	24730118	chr3R	24732471	24732496	Doc	7	2377	3.0	0.0	1.5	2.8	2403	chr3R	24730093	intron	tok +	chr3R	24731294	intron	tok +	chr3R	24732496	intron	tok +	chr3R_7_24730001	chr3R_24730001	RAL-707
1705	chr3R	24927123	24927157	chr3R	24931914	24931948	Doc	7	4791	4.0	2.0	3.0	1.8	4825	chr3R	24927123	intergenic	Trf4-2 +	chr3R	24929536	intergenic	not near genes	chr3R	24931948	intergenic	CG11771 +	chr3R_7_24925001	chr3R_24925001	RAL-707
1719	chr3R	25725831	25725860	chr3R	25734987	25735020	roo	5	9159	3.5	2.5	3.0	1.2	9189	chr3R	25725831	intron	LpR2 -	chr3R	25730426	intron	LpR2 -	chr3R	25735020	intron	LpR2 -	chr3R_5_25730001	chr3R_25730001	RAL-707
1724	chr3R	25832695	25832724	chr3R	25841875	25841906	roo	11	9182	4.0	6.0	5.0	1.8	9211	chr3R	25832695	exon	alpha4GT2 +	chr3R	25837300	intron	alpha4GT2 +	chr3R	25841906	exon	alpha4GT2 +	chr3R_11_25835001	chr3R_25835001	RAL-707
1731	chr3R	26108828	26108840	chr3R	26117410	26117423	Tirant	4	8583	2.0	0.5	1.2	1.8	8595	chr3R	26108828	5` UTR	CG31324 +	chr3R	26113126	intron	CG31324 +	chr3R	26117423	intron	CG31324 +	chr3R_4_26110001	chr3R_26110001	RAL-707
1742	chr3R	26376324	26376356	chr3R	26385484	26385514	roo	10	9160	2.5	0.0	1.2	4.5	9190	chr3R	26376324	intergenic	not near genes	chr3R	26380919	intergenic	not near genes	chr3R	26385514	intergenic	not near genes	chr3R_10_26380001	chr3R_26380001	RAL-707
1743	chr3R	26510522	26510533	chr3R	26519577	26519588	roo	4	9055	3.5	1.5	2.5	1.1	9066	chr3R	26510522	intron	plum -	chr3R	26515055	intron	plum -	chr3R	26519588	intron,5` UTR	plum -,CR45226 +	chr3R_4_26515001	chr3R_26515001	RAL-707
1745	chr3R	26558328	26558360	chr3R	26565640	26565672	Stalker4	11	7312	3.5	3.5	3.5	2.4	7344	chr3R	26558328	intron	scrib +	chr3R	26562000	intron	scrib +	chr3R	26565672	intron	scrib +	chr3R_11_26560001	chr3R_26560001	RAL-707
1748	chr3R	26642728	26642761	chr3R	26643121	26643155	jockey	6	394	3.5	3.5	3.5	1.3	427	chr3R	26642728	intergenic	not near genes	chr3R	26642942	intergenic	not near genes	chr3R	26643155	intergenic	not near genes	chr3R_6_26640001	chr3R_26640001	RAL-707
1754	chr3R	26810553	26810585	chr3R	26811038	26811070	roo	9	485	2.0	3.0	2.5	2.6	517	chr3R	26810553	intron	Tl +	chr3R	26810812	intron	Tl +	chr3R	26811070	intron	Tl +	chr3R_9_26810001	chr3R_26810001	RAL-707
1755	chr3R	27007411	27007430	chr3R	27016546	27016565	roo	9	9135	3.0	3.5	3.2	2.1	9154	chr3R	27007411	intron	RYa-R +	chr3R	27011988	intron	RYa-R +	chr3R	27016565	intron	RYa-R +	chr3R_9_27010001	chr3R_27010001	RAL-707
1756	chr3R	27140518	27140547	chr3R	27148128	27148157	412	14	7610	5.0	5.5	5.2	2.3	7639	chr3R	27140518	intron	CG6051 -	chr3R	27144338	intron	CG6051 -	chr3R	27148157	intron	CG6051 -	chr3R_14_27140001	chr3R_27140001	RAL-707
1759	chr3R	27342796	27342824	chr3R	27351376	27351405	Tirant	12	8581	3.5	2.0	2.8	3.2	8609	chr3R	27342796	intron	CG42534 +	chr3R	27347100	intron	CG42534 +	chr3R	27351405	intron	CG42534 +	chr3R_12_27345001	chr3R_27345001	RAL-707
1768	chr3R	27856759	27856791	chr3R	27858242	27858271	hopper2	9	1482	1.5	4.5	3.0	2.2	1512	chr3R	27856759	intron	CG34353 -	chr3R	27857515	intron	CG34353 -	chr3R	27858271	intron	CG34353 -	chr3R_9_27855001	chr3R_27855001	RAL-707
1769	chr3R	27875703	27875733	chr3R	27882756	27882788	297	9	7055	2.5	2.0	2.2	2.8	7085	chr3R	27875703	intron	CG34353 -	chr3R	27879246	intron	CG34353 -	chr3R	27882788	intron	CG34353 -	chr3R_9_27875001	chr3R_27875001	RAL-707
1772	chr3R	28068493	28068527	chr3R	28073935	28073969	I-element	7	5442	1.0	2.5	1.8	2.5	5476	chr3R	28068493	intron	CG34362 +	chr3R	28071231	intron	CG34362 +	chr3R	28073969	intron	CG34362 +	chr3R_7_28070001	chr3R_28070001	RAL-707
1778	chr3R	28173670	28173702	chr3R	28181099	28181132	mdg1	4	7430	3.5	1.0	2.2	1.2	7462	chr3R	28173670	intron	CG34354 +	chr3R	28177401	intron	CG34354 +	chr3R	28181132	intron	CG34354 +	chr3R_4_28175001	chr3R_28175001	RAL-707
1782	chr3R	28253341	28253372	chr3R	28255851	28255882	jockey	7	2510	4.0	3.0	3.5	1.6	2541	chr3R	28253341	intergenic	not near genes	chr3R	28254612	intergenic	not near genes	chr3R	28255882	intergenic	not near genes	chr3R_7_28250001	chr3R_28250001	RAL-707
1789	chr3R	28758288	28758303	chr3R	28763905	28763919	roo	5	5617	3.0	0.0	1.5	2.0	5631	chr3R	28758288	intergenic	aqrs -	chr3R	28761104	intergenic	not near genes	chr3R	28763919	intergenic	not near genes	chr3R_5_28760001	chr3R_28760001	RAL-707
1790	chr3R	28792869	28792897	chr3R	28797964	28797991	jockey	5	5094	0.5	1.5	1.0	2.5	5122	chr3R	28792869	intergenic	not near genes	chr3R	28795430	intergenic	not near genes	chr3R	28797991	intergenic	not near genes	chr3R_5_28795001	chr3R_28795001	RAL-707
1799	chr3R	29079378	29079410	chr3R	29080750	29080782	NOF	13	1372	2.0	3.0	2.5	3.7	1404	chr3R	29079378	intron	CG11873 +	chr3R	29080080	intron	CG11873 +	chr3R	29080782	intron	CG11873 +	chr3R_13_29080001	chr3R_29080001	RAL-707
1804	chr3R	29319823	29319844	chr3R	29320142	29320163	jockey	6	319	1.5	1.5	1.5	2.4	340	chr3R	29319823	intergenic	Cnx99A -	chr3R	29319993	intergenic	Cnx99A -	chr3R	29320163	intergenic	not near genes	chr3R_6_29315001	chr3R_29315001	RAL-707
1807	chr3R	29406616	29406649	chr3R	29407902	29407935	jockey	7	1286	2.5	2.5	2.5	2.0	1319	chr3R	29406616	intron	Ptp99A +	chr3R	29407276	intron	Ptp99A +	chr3R	29407935	intron	Ptp99A +	chr3R_7_29405001	chr3R_29405001	RAL-707
1816	chr3R	29738273	29738297	chr3R	29739740	29739763	hobo	5	1466	1.5	4.5	3.0	1.2	1490	chr3R	29738273	intergenic	CG1969 +,CG7598 +	chr3R	29739018	intron	CG1969 +	chr3R	29739763	5` UTR	CG1969 +	chr3R_5_29735001	chr3R_29735001	RAL-707
1819	chr3R	29882025	29882051	chr3R	29891182	29891208	roo	12	9157	2.5	5.5	4.0	2.4	9183	chr3R	29882025	intron	CG31038 +	chr3R	29886616	intron	CG31038 +	chr3R	29891208	intron	CG31038 +	chr3R_12_29885001	chr3R_29885001	RAL-707
1825	chr3R	30084853	30084886	chr3R	30086319	30086353	hobo	7	1467	0.0	2.5	1.2	3.2	1500	chr3R	30084853	intron	sima +	chr3R	30085603	intron	sima +	chr3R	30086353	intron	sima +	chr3R_7_30085001	chr3R_30085001	RAL-707
1830	chr3R	30238762	30238796	chr3R	30239926	30239960	1360	6	1163	2.0	1.0	1.5	2.4	1198	chr3R	30238762	intergenic	not near genes	chr3R	30239361	intergenic	not near genes	chr3R	30239960	intergenic	not near genes	chr3R_6_30235001	chr3R_30235001	RAL-707
1833	chr3R	30375555	30375571	chr3R	30383180	30383196	412	4	7625	2.0	5.5	3.8	0.8	7641	chr3R	30375555	intergenic	not near genes	chr3R	30379376	intergenic	not near genes	chr3R	30383196	intergenic	not near genes	chr3R_4_30375001	chr3R_30375001	RAL-707
1834	chr3R	30396215	30396245	chr3R	30404481	30404510	roo	9	8266	1.5	2.0	1.8	3.2	8295	chr3R	30396215	intergenic	not near genes	chr3R	30400362	intergenic	not near genes	chr3R	30404510	5` UTR	CR45570 +	chr3R_9_30400001	chr3R_30400001	RAL-707
1839	chr3R	30480473	30480507	chr3R	30482941	30482975	jockey	14	2468	5.5	1.5	3.5	3.1	2502	chr3R	30480473	intron	PH4alphaEFB +	chr3R	30481724	intron	PH4alphaEFB +	chr3R	30482975	intron	PH4alphaEFB +	chr3R_14_30480001	chr3R_30480001	RAL-707
1846	chr3R	30679517	30679538	chr3R	30686986	30687007	blood	7	7469	3.5	1.5	2.5	2.0	7490	chr3R	30679517	intergenic	not near genes	chr3R	30683262	intergenic	not near genes	chr3R	30687007	intergenic	not near genes	chr3R_7_30680001	chr3R_30680001	RAL-707
1851	chr3R	31074234	31074262	chr3R	31081831	31081860	springer	8	7598	2.0	2.0	2.0	2.7	7626	chr3R	31074234	intron	Sox100B +	chr3R	31078047	intron	Sox100B +	chr3R	31081860	intron	Sox100B +	chr3R_8_31075001	chr3R_31075001	RAL-707
1855	chr3R	31279379	31279408	chr3R	31285570	31285598	diver	6	6190	2.0	3.5	2.8	1.6	6219	chr3R	31279379	intergenic	not near genes	chr3R	31282488	intergenic	not near genes	chr3R	31285598	intergenic	not near genes	chr3R_6_31280001	chr3R_31280001	RAL-707
1858	chr3R	31413087	31413118	chr3R	31418287	31418318	copia	12	5200	4.5	0.0	2.2	3.8	5231	chr3R	31413087	intron	Gprk2 +	chr3R	31415702	intron	Gprk2 +	chr3R	31418318	intron	Gprk2 +	chr3R_12_31415001	chr3R_31415001	RAL-707
1862	chr3R	31691533	31691560	chr3R	31696299	31696326	Doc	9	4766	5.5	7.5	6.5	1.2	4793	chr3R	31691533	intergenic	not near genes	chr3R	31693930	intergenic	not near genes	chr3R	31696326	intergenic	not near genes	chr3R_9_31690001	chr3R_31690001	RAL-707
1870	chr3R	31997995	31998025	chr3R	32005465	32005495	blood	12	7470	2.5	2.0	2.2	3.8	7500	chr3R	31997995	intron	heph -	chr3R	32001745	intron	heph -	chr3R	32005495	intron	heph -	chr3R_12_32000001	chr3R_32000001	RAL-707
1876	chr4	671603	671636	chr4	680186	680219	Tirant	12	8583	6.0	7.5	6.8	1.5	8616	chr4	671603	intron	CG11360 +	chr4	675911	intron	CG11360 +	chr4	680219	intron	CG11360 +	chr4_12_675001	chr4_675001	RAL-707
1878	chrX	295859	295866	chrX	303479	303486	412	4	7620	1.5	1.5	1.5	1.6	7627	chrX	295859	intron	CG3777 +	chrX	299672	intron	CG3777 +	chrX	303486	intron	CG3777 +	chrX_4_295001	chrX_295001	RAL-707
1879	chrX	318471	318491	chrX	323557	323577	flea	5	5086	3.5	2.5	3.0	1.2	5106	chrX	318471	intron,intron	CG3777 +,CG32816 -	chrX	321024	intron,intron	CG3777 +,CG32816 -	chrX	323577	intron,intron	CG3777 +,CG32816 -	chrX_5_320001	chrX_320001	RAL-707
1880	chrX	428419	428451	chrX	434604	434636	3S18	14	6185	2.0	1.5	1.8	5.0	6217	chrX	428419	intron	CG32816 -	chrX	431528	intron	CG32816 -	chrX	434636	intron	CG32816 -	chrX_14_430001	chrX_430001	RAL-707
1881	chrX	551427	551450	chrX	558989	559012	412	9	7561	2.5	1.0	1.8	3.2	7585	chrX	551427	intron	Appl +	chrX	555220	intron	Appl +	chrX	559012	intron	Appl +	chrX_9_555001	chrX_555001	RAL-707
1891	chrX	827602	827634	chrX	835393	835425	roo	9	7792	3.0	1.5	2.2	2.8	7823	chrX	827602	intron	CG43867 -	chrX	831514	intron	CG43867 -	chrX	835425	intron	CG43867 -	chrX_9_830001	chrX_830001	RAL-707
1893	chrX	906703	906720	chrX	908492	908509	S-element	5	1789	2.5	5.0	3.8	1.0	1806	chrX	906703	intron	CG43867 -	chrX	907606	intron	CG43867 -	chrX	908509	intron	CG43867 -	chrX_5_905001	chrX_905001	RAL-707
1898	chrX	1357774	1357800	chrX	1367941	1367970	Doc	8	10170	2.5	1.0	1.8	2.9	10196	chrX	1357774	intergenic	png -	chrX	1362872	intergenic	not near genes	chrX	1367970	intergenic	not near genes	chrX_8_1360001	chrX_1360001	RAL-707
1899	chrX	1518042	1518071	chrX	1523444	1523473	jockey	8	5401	2.0	1.5	1.8	2.9	5431	chrX	1518042	intergenic	inc +	chrX	1520758	intergenic	not near genes	chrX	1523473	intergenic	not near genes	chrX_8_1520001	chrX_1520001	RAL-707
1901	chrX	1930546	1930566	chrX	1938117	1938136	opus	4	7570	1.5	1.0	1.2	1.8	7590	chrX	1930546	intergenic	CG11596 +	chrX	1934341	intergenic	not near genes	chrX	1938136	3` UTR	CG3857 -	chrX_4_1930001	chrX_1930001	RAL-707
1905	chrX	2399836	2399867	chrX	2408188	2408220	roo	6	8353	3.0	3.5	3.2	1.4	8384	chrX	2399836	intergenic	not near genes	chrX	2404028	intergenic	not near genes	chrX	2408220	intergenic	not near genes	chrX_6_2400001	chrX_2400001	RAL-707
1907	chrX	2610383	2610390	chrX	2617500	2617507	HMS-Beagle	4	7117	2.5	0.5	1.5	1.6	7124	chrX	2610383	intergenic	CG8636 -	chrX	2613945	intergenic	not near genes	chrX	2617507	intergenic	Tsp3A -	chrX_4_2610001	chrX_2610001	RAL-707
1909	chrX	2664397	2664415	chrX	2665543	2665561	1360	4	1146	2.0	3.0	2.5	1.1	1164	chrX	2664397	intron	sgg +	chrX	2664979	intron	sgg +	chrX	2665561	intron	sgg +	chrX_4_2660001	chrX_2660001	RAL-707
1914	chrX	3493089	3493124	chrX	3502248	3502283	roo	6	9159	3.0	0.0	1.5	2.4	9194	chrX	3493089	intron,intron	CR44999 +,Gas8 -	chrX	3497686	intron,intron	CR44999 +,Gas8 -	chrX	3502283	intron,intron	CR44999 +,Gas8 -	chrX_6_3495001	chrX_3495001	RAL-707
1924	chrX	3986861	3986892	chrX	3994494	3994524	412	9	7632	3.5	1.5	2.5	2.6	7663	chrX	3986861	intergenic	not near genes	chrX	3990692	intergenic	not near genes	chrX	3994524	intergenic	not near genes	chrX_9_3990001	chrX_3990001	RAL-707
1927	chrX	4157903	4157925	chrX	4164938	4164960	297	6	7034	1.5	3.0	2.2	1.9	7057	chrX	4157903	intron	Fas2 -	chrX	4161432	intron	Fas2 -	chrX	4164960	intron	Fas2 -	chrX_6_4160001	chrX_4160001	RAL-707
1933	chrX	4763252	4763284	chrX	4763739	4763772	Stalker4	7	487	1.0	0.5	0.8	3.9	520	chrX	4763252	intergenic	not near genes	chrX	4763512	intergenic	not near genes	chrX	4763772	intergenic	not near genes	chrX_7_4760001	chrX_4760001	RAL-707
1934	chrX	4792384	4792409	chrX	4792817	4792842	jockey	6	432	2.5	6.0	4.2	1.2	458	chrX	4792384	intergenic	not near genes	chrX	4792613	intergenic	not near genes	chrX	4792842	intergenic	not near genes	chrX_6_4790001	chrX_4790001	RAL-707
1935	chrX	4827975	4827995	chrX	4835345	4835366	Stalker4	5	7369	2.0	3.5	2.8	1.3	7391	chrX	4827975	intergenic	not near genes	chrX	4831670	intergenic	not near genes	chrX	4835366	intergenic	not near genes	chrX_5_4830001	chrX_4830001	RAL-707
1938	chrX	4990053	4990076	chrX	4997266	4997290	roo	6	7214	1.5	1.5	1.5	2.4	7237	chrX	4990053	intron	CR44833 -	chrX	4993672	intron	CR44833 -	chrX	4997290	intron	CR44833 -	chrX_6_4990001	chrX_4990001	RAL-707
1940	chrX	5096297	5096304	chrX	5103862	5103869	springer	5	7565	0.5	2.0	1.2	2.3	7572	chrX	5096297	intron,intron	CG15465 +,rg +	chrX	5100083	intron,intron	CG15465 +,rg +	chrX	5103869	intron,intron	CG15465 +,rg +	chrX_5_5100001	chrX_5100001	RAL-707
1943	chrX	5338712	5338737	chrX	5339965	5339988	jockey	6	1253	0.0	3.0	1.5	2.4	1276	chrX	5338712	intergenic	not near genes	chrX	5339350	intergenic	not near genes	chrX	5339988	intergenic	SK +	chrX_6_5335001	chrX_5335001	RAL-707
1946	chrX	5481066	5481091	chrX	5485034	5485059	I-element	8	3968	0.0	1.5	0.8	4.4	3993	chrX	5481066	intron	SPR +	chrX	5483062	intron	SPR +	chrX	5485059	intron	SPR +	chrX_8_5480001	chrX_5480001	RAL-707
1947	chrX	5524850	5524867	chrX	5528713	5528730	412	6	3863	2.5	0.0	1.2	2.7	3880	chrX	5524850	intergenic	snoRNA:Psi28S-3342 -	chrX	5526790	intergenic	not near genes	chrX	5528730	intergenic	Vsx2 -	chrX_6_5525001	chrX_5525001	RAL-707
1948	chrX	5884167	5884184	chrX	5884406	5884425	pogo	6	241	6.0	2.0	4.0	1.2	258	chrX	5884167	intron	CR45668 -	chrX	5884296	intron	CR45668 -	chrX	5884425	intron	CR45668 -	chrX_6_5880001	chrX_5880001	RAL-707
1950	chrX	6171592	6171616	chrX	6179025	6179049	Quasimodo	6	7433	1.0	2.5	1.8	2.1	7457	chrX	6171592	intron	Ca-alpha1T -	chrX	6175320	intron	Ca-alpha1T -	chrX	6179049	intron	Ca-alpha1T -	chrX_6_6175001	chrX_6175001	RAL-707
1951	chrX	6335216	6335244	chrX	6337725	6337754	Tirant	5	2509	0.0	1.5	0.8	2.8	2538	chrX	6335216	intergenic	not near genes	chrX	6336485	intergenic	not near genes	chrX	6337754	intergenic	CG3842 +	chrX_5_6335001	chrX_6335001	RAL-707
1953	chrX	6392864	6392898	chrX	6397628	6397663	Doc	8	4765	1.0	0.5	0.8	4.4	4799	chrX	6392864	intergenic	not near genes	chrX	6395264	intergenic	not near genes	chrX	6397663	intergenic	not near genes	chrX_8_6395001	chrX_6395001	RAL-707
1954	chrX	6562817	6562847	chrX	6571298	6571324	Tirant	12	8480	5.5	3.0	4.2	2.3	8507	chrX	6562817	intron	CG34417 +	chrX	6567070	intron	CG34417 +	chrX	6571324	intron	CG34417 +	chrX_12_6565001	chrX_6565001	RAL-707
1955	chrX	6605479	6605506	chrX	6608501	6608528	Burdock	6	3020	1.5	2.0	1.8	2.1	3049	chrX	6605479	intron	pigs +	chrX	6607004	intron	pigs +	chrX	6608528	intron	pigs +	chrX_6_6605001	chrX_6605001	RAL-707
1960	chrX	7023609	7023631	chrX	7030999	7031019	Tabor	6	7390	3.0	1.5	2.2	1.9	7410	chrX	7023609	intron	CG12541 -	chrX	7027314	intron	CG12541 -	chrX	7031019	intron	CG12541 -	chrX_6_7025001	chrX_7025001	RAL-707
1964	chrX	7702909	7702928	chrX	7703346	7703367	jockey	4	438	3.0	1.5	2.2	1.2	458	chrX	7702909	intron	CHES-1-like -	chrX	7703138	intron	CHES-1-like -	chrX	7703367	intron	CHES-1-like -	chrX_4_7700001	chrX_7700001	RAL-707
1967	chrX	7845723	7845739	chrX	7847214	7847230	hopper2	6	1491	3.0	2.5	2.8	1.6	1507	chrX	7845723	intergenic	not near genes	chrX	7846476	intergenic	not near genes	chrX	7847230	intergenic	not near genes	chrX_6_7845001	chrX_7845001	RAL-707
1971	chrX	8364834	8364866	chrX	8365238	8365270	BS	5	404	1.5	2.5	2.0	1.7	436	chrX	8364834	intron	nAChRalpha3 -	chrX	8365052	intron	nAChRalpha3 -	chrX	8365270	intron	nAChRalpha3 -	chrX_5_8365001	chrX_8365001	RAL-707
1977	chrX	8922331	8922361	chrX	8922765	8922795	jockey	8	433	1.0	3.5	2.2	2.5	464	chrX	8922331	intron	rdgA +	chrX	8922563	intron	rdgA +	chrX	8922795	intron	rdgA +	chrX_8_8920001	chrX_8920001	RAL-707
1978	chrX	8927591	8927615	chrX	8929860	8929885	NOF	5	2270	2.0	3.0	2.5	1.4	2294	chrX	8927591	intron	rdgA +	chrX	8928738	intron	rdgA +	chrX	8929885	intron	rdgA +	chrX_5_8925001	chrX_8925001	RAL-707
1980	chrX	8948764	8948789	chrX	8956274	8956299	roo	4	7510	0.0	2.5	1.2	1.8	7535	chrX	8948764	intron	rdgA +	chrX	8952532	intron	rdgA +	chrX	8956299	intron	rdgA +	chrX_4_8950001	chrX_8950001	RAL-707
1984	chrX	9508134	9508166	chrX	9509652	9509684	jockey	8	1518	3.0	2.0	2.5	2.3	1550	chrX	9508134	intron	CG32700 -	chrX	9508909	intron	CG32700 -	chrX	9509684	intron	CG32700 -	chrX_8_9505001	chrX_9505001	RAL-707
1986	chrX	9575789	9575813	chrX	9576113	9576137	mdg3	10	324	5.0	3.0	4.0	2.0	348	chrX	9575789	intron,exon	CG32699 -,CG42395 -	chrX	9575963	intron,intron	CG32699 -,CG42395 -	chrX	9576137	intron,5` UTR	CG32699 -,CG42395 -	chrX_10_9575001	chrX_9575001	RAL-707
1991	chrX	10348808	10348829	chrX	10356373	10356394	springer	4	7565	4.0	1.5	2.8	1.1	7586	chrX	10348808	intergenic	snoRNA:U3:9B +	chrX	10352601	intergenic	not near genes	chrX	10356394	intergenic	l(1)G0289 -	chrX_4_10350001	chrX_10350001	RAL-707
1994	chrX	10550863	10550886	chrX	10552330	10552353	hobo	7	1467	1.5	1.5	1.5	2.8	1490	chrX	10550863	intron	spri -	chrX	10551608	intron	spri -	chrX	10552353	intron	spri -	chrX_7_10550001	chrX_10550001	RAL-707
1995	chrX	10686051	10686082	chrX	10691188	10691217	roo	11	5137	3.0	3.0	3.0	2.8	5166	chrX	10686051	intron	X11Lbeta +	chrX	10688634	intron	X11Lbeta +	chrX	10691217	intron	X11Lbeta +	chrX_11_10685001	chrX_10685001	RAL-707
1997	chrX	10772679	10772695	chrX	10772762	10772778	Tirant	4	82	3.0	1.0	2.0	1.3	99	chrX	10772679	intron	CG15211 +	chrX	10772728	intron	CG15211 +	chrX	10772778	intron	CG15211 +	chrX_4_10770001	chrX_10770001	RAL-707
1999	chrX	11194449	11194462	chrX	11201870	11201883	gypsy5	5	7421	2.0	5.0	3.5	1.1	7434	chrX	11194449	intergenic	not near genes	chrX	11198166	intergenic	not near genes	chrX	11201883	intergenic	CG11106 +	chrX_5_11195001	chrX_11195001	RAL-707
2001	chrX	11268560	11268593	chrX	11270053	11270086	hopper2	8	1492	2.0	3.5	2.8	2.1	1526	chrX	11268560	intron	CG44422 -	chrX	11269323	intron	CG44422 -	chrX	11270086	intron	CG44422 -	chrX_8_11265001	chrX_11265001	RAL-707
2002	chrX	11312070	11312092	chrX	11319419	11319443	Stalker2	4	7350	1.5	7.0	4.2	0.8	7373	chrX	11312070	intergenic	not near genes	chrX	11315756	intergenic	not near genes	chrX	11319443	intergenic	not near genes	chrX_4_11315001	chrX_11315001	RAL-707
2005	chrX	11633424	11633447	chrX	11640478	11640501	297	10	7054	2.0	4.0	3.0	2.5	7077	chrX	11633424	intron	Ptp10D +	chrX	11636962	intron	Ptp10D +	chrX	11640501	intron	Ptp10D +	chrX_10_11635001	chrX_11635001	RAL-707
2011	chrX	12168142	12168166	chrX	12173584	12173608	I-element	4	5442	1.5	2.5	2.0	1.3	5466	chrX	12168142	intron	Ten-a +	chrX	12170875	intron	Ten-a +	chrX	12173608	intron	Ten-a +	chrX_4_12170001	chrX_12170001	RAL-707
2014	chrX	12301954	12301981	chrX	12303260	12303287	X-element	5	1306	2.0	1.5	1.8	1.8	1333	chrX	12301954	intron	Ten-a +	chrX	12302620	intron	Ten-a +	chrX	12303287	intron	Ten-a +	chrX_5_12300001	chrX_12300001	RAL-707
2025	chrX	13429463	13429488	chrX	13430612	13430637	jockey	5	1149	2.0	0.5	1.2	2.3	1174	chrX	13429463	intergenic	not near genes	chrX	13430050	intergenic	not near genes	chrX	13430637	intergenic	not near genes	chrX_5_13430001	chrX_13430001	RAL-707
2032	chrX	14105039	14105055	chrX	14114190	14114204	roo	5	9150	1.5	3.0	2.2	1.6	9165	chrX	14105039	intergenic	not near genes	chrX	14109622	intergenic	not near genes	chrX	14114204	5` UTR	CR44657 +	chrX_5_14105001	chrX_14105001	RAL-707
2035	chrX	14157593	14157607	chrX	14163250	14163264	297	6	5657	1.0	0.5	0.8	3.3	5671	chrX	14157593	intergenic	not near genes	chrX	14160428	intergenic	not near genes	chrX	14163264	intergenic	not near genes	chrX_6_14160001	chrX_14160001	RAL-707
2043	chrX	14636465	14636483	chrX	14641906	14641924	I-element	7	5441	1.0	4.5	2.8	1.8	5459	chrX	14636465	intron	NetA -	chrX	14639194	intron	NetA -	chrX	14641924	intron	NetA -	chrX_7_14635001	chrX_14635001	RAL-707
2045	chrX	14778035	14778058	chrX	14782832	14782854	Doc	6	4797	1.0	2.0	1.5	2.4	4819	chrX	14778035	intergenic	CG5347 +	chrX	14780444	intergenic	not near genes	chrX	14782854	intergenic	Ag5r2 -	chrX_6_14780001	chrX_14780001	RAL-707
2046	chrX	14818774	14818796	chrX	14823978	14824000	copia	5	5204	0.5	1.0	0.8	2.8	5226	chrX	14818774	intron	rut -	chrX	14821387	intron	rut -	chrX	14824000	intron	rut -	chrX_5_14820001	chrX_14820001	RAL-707
2049	chrX	15273702	15273725	chrX	15274868	15274891	1360	5	1166	7.0	3.5	5.2	0.8	1189	chrX	15273702	intergenic	not near genes	chrX	15274296	intergenic	not near genes	chrX	15274891	intergenic	not near genes	chrX_5_15270001	chrX_15270001	RAL-707
2051	chrX	15413055	15413082	chrX	15417357	15417383	Juan	7	4302	4.5	3.0	3.8	1.5	4328	chrX	15413055	intron	Cngl -	chrX	15415219	intron	Cngl -	chrX	15417383	intron	Cngl -	chrX_7_15415001	chrX_15415001	RAL-707
2069	chrX	17792964	17792981	chrX	17796260	17796277	flea	7	3296	0.5	0.5	0.5	4.7	3313	chrX	17792964	intron	OdsH +	chrX	17794620	intron	OdsH +	chrX	17796277	intron	OdsH +	chrX_7_17790001	chrX_17790001	RAL-707
2075	chrX	18429497	18429525	chrX	18434807	18434836	Transpac	8	5311	0.5	1.0	0.8	4.4	5339	chrX	18429497	intergenic	not near genes	chrX	18432166	intergenic	not near genes	chrX	18434836	intergenic	not near genes	chrX_8_18430001	chrX_18430001	RAL-707
2085	chrX	19060412	19060436	chrX	19065196	19065220	Doc	4	4784	0.5	1.5	1.0	2.0	4808	chrX	19060412	intron	CG14190 +	chrX	19062816	intron	CG14190 +	chrX	19065220	intron	CG14190 +	chrX_4_19060001	chrX_19060001	RAL-707
2088	chrX	19136553	19136582	chrX	19143473	19143501	412	4	6920	2.0	0.5	1.2	1.8	6948	chrX	19136553	intergenic	not near genes	chrX	19140027	intergenic	not near genes	chrX	19143501	3` UTR	RhoGAP18B -	chrX_4_19140001	chrX_19140001	RAL-707
2094	chrX	19356995	19357009	chrX	19358436	19358450	NOF	5	1441	2.0	0.0	1.0	2.5	1455	chrX	19356995	intron	kek5 +	chrX	19357722	intron	kek5 +	chrX	19358450	intron	kek5 +	chrX_5_19355001	chrX_19355001	RAL-707
2095	chrX	19472137	19472156	chrX	19472707	19472726	jockey	4	570	1.0	4.0	2.5	1.1	589	chrX	19472137	intergenic	kek5 +	chrX	19472432	intergenic	not near genes	chrX	19472726	intergenic	not near genes	chrX_4_19470001	chrX_19470001	RAL-707
2096	chrX	19710071	19710098	chrX	19711857	19711881	S-element	9	1785	2.0	2.0	2.0	3.0	1810	chrX	19710071	intron	meso18E -	chrX	19710976	intron	meso18E -	chrX	19711881	intron	meso18E -	chrX_9_19710001	chrX_19710001	RAL-707
2104	chrX	20377330	20377348	chrX	20378797	20378814	hobo	4	1467	3.5	3.5	3.5	0.9	1484	chrX	20377330	intergenic	not near genes	chrX	20378072	intergenic	not near genes	chrX	20378814	intergenic	not near genes	chrX_4_20375001	chrX_20375001	RAL-707
2110	chrX	20504132	20504153	chrX	20505653	20505672	transib2	7	1520	2.5	2.5	2.5	2.0	1540	chrX	20504132	intron	RhoGAP19D -	chrX	20504902	intron	RhoGAP19D -	chrX	20505672	intron	RhoGAP19D -	chrX_7_20500001	chrX_20500001	RAL-707
2115	chrX	20940736	20940756	chrX	20942203	20942225	hobo	6	1468	3.5	3.5	3.5	1.3	1489	chrX	20940736	intergenic	not near genes	chrX	20941480	intergenic	not near genes	chrX	20942225	intergenic	not near genes	chrX_6_20940001	chrX_20940001	RAL-707
2117	chrX	21086137	21086159	chrX	21087166	21087188	jockey	5	1029	3.0	2.5	2.8	1.3	1051	chrX	21086137	intergenic	not near genes	chrX	21086662	intergenic	not near genes	chrX	21087188	intergenic	not near genes	chrX_5_21085001	chrX_21085001	RAL-707
2122	chrX	21458691	21458729	chrX	21464127	21464165	Ivk	7	5436	0.0	2.0	1.0	3.5	5474	chrX	21458691	intergenic	not near genes	chrX	21461428	intergenic	not near genes	chrX	21464165	intergenic	not near genes	chrX_7_21460001	chrX_21460001	RAL-707
2130	chrX	22564571	22564578	chrX	22575145	22575150	jockey	4	10573	12.5	5.0	8.8	0.4	10579	chrX	22564571	intergenic	not near genes	chrX	22569860	intergenic	not near genes	chrX	22575150	intergenic	not near genes	chrX_4_22565001	chrX_22565001	RAL-707
2133	chrX	22697500	22697513	chrX	22701797	22701810	Juan	5	4297	3.0	4.0	3.5	1.1	4310	chrX	22697500	intron	CR44997 +	chrX	22699655	intron	CR44997 +	chrX	22701810	intron	CR44997 +	chrX_5_22695001	chrX_22695001	RAL-707
2134	chrX	22771508	22771533	chrX	22774798	22774824	297	6	3291	2.5	1.0	1.8	2.1	3316	chrX	22771508	intron	CR44997 +	chrX	22773166	intron	CR44997 +	chrX	22774824	intron	CR44997 +	chrX_6_22770001	chrX_22770001	RAL-707
2136	chrX	22987104	22987134	chrX	22989763	22989793	Burdock	5	2659	1.0	1.0	1.0	2.5	2689	chrX	22987104	intron,intron	stnA -,stnB -	chrX	22988448	intron,intron	stnA -,stnB -	chrX	22989793	intron,intron	stnA -,stnB -	chrX_5_22985001	chrX_22985001	RAL-707
2137	chrX	22996309	22996338	chrX	23003543	23003572	roo	7	7234	2.5	2.5	2.5	2.0	7263	chrX	22996309	intron,intron	stnA -,stnB -	chrX	22999940	intron,intron	stnA -,stnB -	chrX	23003572	intron,intron	stnA -,stnB -	chrX_7_22995001	chrX_22995001	RAL-707
2139	chrY	1431368	1431373	chrY	1447404	1447409	Doc	4	16036	1.5	2.5	2.0	1.3	16041	chrY	1431368	intergenic	not near genes	chrY	1439388	intergenic	not near genes	chrY	1447409	intergenic	not near genes	chrY_4_1435001	chrY_1435001	RAL-707