SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47459	47490	chr2L	52564	52595	jockey	7	5105	8.0	2.5	5.2	1.1	5136	chr2L	47459	intron	Cda5 -	chr2L	50027	intron	Cda5 -	chr2L	52595	intron	Cda5 -	chr2L_7_50001	chr2L_50001	RAL-705
5	chr2L	347887	347912	chr2L	355387	355410	blood	7	7500	3.0	2.0	2.5	2.0	7523	chr2L	347887	3` UTR	Plc21C +	chr2L	351648	intron	Plc21C +	chr2L	355410	3` UTR	Plc21C +	chr2L_7_350001	chr2L_350001	RAL-705
10	chr2L	686921	686952	chr2L	695960	695992	roo	5	9039	0.5	3.5	2.0	1.7	9071	chr2L	686921	intron	ds -	chr2L	691456	intron	ds -	chr2L	695992	intron	ds -	chr2L_5_690001	chr2L_690001	RAL-705
12	chr2L	770473	770494	chr2L	772253	772275	Bari1	7	1780	3.0	4.0	3.5	1.6	1802	chr2L	770473	intergenic	not near genes	chr2L	771374	intergenic	not near genes	chr2L	772275	intergenic	CR44614 +	chr2L_7_770001	chr2L_770001	RAL-705
14	chr2L	976877	976906	chr2L	984513	984542	roo	5	7636	3.5	0.0	1.8	1.8	7665	chr2L	976877	intergenic	not near genes	chr2L	980710	intergenic	not near genes	chr2L	984542	intergenic	not near genes	chr2L_5_980001	chr2L_980001	RAL-705
20	chr2L	1220133	1220162	chr2L	1227599	1227628	blood	12	7466	1.5	0.5	1.0	6.0	7495	chr2L	1220133	intron	CG42329 +	chr2L	1223880	intron	CG42329 +	chr2L	1227628	intron	CG42329 +	chr2L_12_1220001	chr2L_1220001	RAL-705
22	chr2L	1570705	1570721	chr2L	1573577	1573593	F-element	8	2872	1.5	4.5	3.0	2.0	2888	chr2L	1570705	intron	haf +	chr2L	1572149	intron	haf +	chr2L	1573593	intron	haf +	chr2L_8_1570001	chr2L_1570001	RAL-705
26	chr2L	1678998	1679000	chr2L	1686463	1686465	blood	5	7465	0.0	12.0	6.0	0.7	7467	chr2L	1678998	intron	chinmo +	chr2L	1682732	intron	chinmo +	chr2L	1686465	intron	chinmo +	chr2L_5_1680001	chr2L_1680001	RAL-705
27	chr2L	1711355	1711386	chr2L	1711679	1711710	mdg3	9	323	1.0	3.5	2.2	2.8	355	chr2L	1711355	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711532	3` UTR	frtz -	chr2L	1711710	3` UTR	frtz -	chr2L_9_1710001	chr2L_1710001	RAL-705
36	chr2L	2100376	2100402	chr2L	2109526	2109553	roo	10	9151	3.0	2.5	2.8	2.6	9177	chr2L	2100376	intron	dpr3 -	chr2L	2104964	intron	dpr3 -	chr2L	2109553	intron	dpr3 -	chr2L_10_2100001	chr2L_2100001	RAL-705
37	chr2L	2112117	2112131	chr2L	2119779	2119793	opus	4	7662	4.5	2.0	3.2	1.0	7676	chr2L	2112117	intergenic	not near genes	chr2L	2115955	intergenic	not near genes	chr2L	2119793	intergenic	not near genes	chr2L_4_2115001	chr2L_2115001	RAL-705
47	chr2L	2661210	2661234	chr2L	2663045	2663072	I-element	7	1837	0.5	1.0	0.8	3.9	1862	chr2L	2661210	intergenic	not near genes	chr2L	2662141	intergenic	not near genes	chr2L	2663072	intergenic	not near genes	chr2L_7_2660001	chr2L_2660001	RAL-705
53	chr2L	2933309	2933326	chr2L	2935486	2935503	pogo	5	2177	2.5	5.0	3.8	1.0	2194	chr2L	2933309	intron	lilli +	chr2L	2934406	intron	lilli +	chr2L	2935503	intron	lilli +	chr2L_5_2930001	chr2L_2930001	RAL-705
56	chr2L	3073033	3073060	chr2L	3078236	3078263	copia	9	5203	1.0	1.0	1.0	4.5	5230	chr2L	3073033	intron	toc -	chr2L	3075648	intron	toc -	chr2L	3078263	intron	toc -	chr2L_9_3075001	chr2L_3075001	RAL-705
60	chr2L	3202737	3202771	chr2L	3210166	3210200	mdg1	8	7428	0.0	2.0	1.0	4.0	7463	chr2L	3202737	intergenic	not near genes	chr2L	3206468	intergenic	not near genes	chr2L	3210200	intergenic	CR45336 +	chr2L_8_3205001	chr2L_3205001	RAL-705
61	chr2L	3251494	3251527	chr2L	3259059	3259092	springer	7	7565	2.0	3.0	2.5	2.0	7598	chr2L	3251494	intergenic	not near genes	chr2L	3255293	intergenic	not near genes	chr2L	3259092	intergenic	not near genes	chr2L_7_3255001	chr2L_3255001	RAL-705
65	chr2L	3388606	3388628	chr2L	3388847	3388869	pogo	4	241	2.0	1.0	1.5	1.6	263	chr2L	3388606	intergenic	CG42460 -	chr2L	3388738	intergenic	CG42460 -	chr2L	3388869	intergenic	CG42460 -,CR44791 +	chr2L_4_3385001	chr2L_3385001	RAL-705
67	chr2L	3649792	3649821	chr2L	3654995	3655024	copia	5	5203	2.5	3.0	2.8	1.3	5232	chr2L	3649792	intron	for -	chr2L	3652408	intron	for -	chr2L	3655024	intron	for -	chr2L_5_3650001	chr2L_3650001	RAL-705
76	chr2L	4066040	4066059	chr2L	4068864	4068884	Juan	4	2824	3.0	3.0	3.0	1.0	2844	chr2L	4066040	intron	ed +	chr2L	4067462	intron	ed +	chr2L	4068884	intron	ed +	chr2L_4_4065001	chr2L_4065001	RAL-705
77	chr2L	4181294	4181304	chr2L	4183926	4183935	Burdock	8	2632	1.0	0.5	0.8	4.4	2641	chr2L	4181294	intergenic	not near genes	chr2L	4182614	intergenic	not near genes	chr2L	4183935	intergenic	not near genes	chr2L_8_4180001	chr2L_4180001	RAL-705
83	chr2L	4601708	4601731	chr2L	4609149	4609170	mdg1	9	7440	1.0	2.5	1.8	3.2	7462	chr2L	4601708	intron	dp -	chr2L	4605439	intron	dp -	chr2L	4609170	intron	dp -	chr2L_9_4605001	chr2L_4605001	RAL-705
88	chr2L	4918177	4918197	chr2L	4923249	4923270	jockey	8	5073	4.5	4.5	4.5	1.5	5093	chr2L	4918177	intron	hoe1 -	chr2L	4920724	intron	hoe1 -	chr2L	4923270	intron	hoe1 -	chr2L_8_4920001	chr2L_4920001	RAL-705
89	chr2L	4953512	4953539	chr2L	4953753	4953780	pogo	8	241	4.0	0.5	2.2	2.5	268	chr2L	4953512	intergenic	Jon25Bii -	chr2L	4953646	intergenic	not near genes	chr2L	4953780	intergenic	Jon25Bi -	chr2L_8_4950001	chr2L_4950001	RAL-705
97	chr2L	5342771	5342798	chr2L	5345151	5345178	Doc	5	2380	3.0	5.0	4.0	1.0	2407	chr2L	5342771	intergenic	not near genes	chr2L	5343974	intergenic	not near genes	chr2L	5345178	intergenic	not near genes	chr2L_5_5340001	chr2L_5340001	RAL-705
104	chr2L	5827717	5827739	chr2L	5836725	5836747	roo	5	9008	2.5	4.5	3.5	1.1	9030	chr2L	5827717	intron	TrissinR +	chr2L	5832232	intron	TrissinR +	chr2L	5836747	intron	TrissinR +	chr2L_5_5830001	chr2L_5830001	RAL-705
111	chr2L	6279644	6279650	chr2L	6279723	6279729	INE-1	4	79	4.0	1.0	2.5	1.1	85	chr2L	6279644	intron	Ddr +	chr2L	6279686	intron	Ddr +	chr2L	6279729	intron	Ddr +	chr2L_4_6275001	chr2L_6275001	RAL-705
113	chr2L	6363149	6363163	chr2L	6366070	6366085	Burdock	6	2921	4.0	3.0	3.5	1.3	2936	chr2L	6363149	intergenic	not near genes	chr2L	6364617	intergenic	not near genes	chr2L	6366085	intergenic	not near genes	chr2L_6_6360001	chr2L_6360001	RAL-705
115	chr2L	6426861	6426887	chr2L	6445121	6445146	roo	10	18260	4.0	5.0	4.5	1.8	18285	chr2L	6426861	3` UTR	CG9527 -	chr2L	6436004	intron	CG9527 -	chr2L	6445146	exon	CG9527 -	chr2L_10_6435001	chr2L_6435001	RAL-705
121	chr2L	6876775	6876806	chr2L	6882963	6882996	diver	7	6190	5.5	0.5	3.0	1.8	6221	chr2L	6876775	intron	Nlg2 +	chr2L	6879886	intron	Nlg2 +	chr2L	6882996	intron	Nlg2 +	chr2L_7_6875001	chr2L_6875001	RAL-705
129	chr2L	7343330	7343359	chr2L	7350445	7350474	roo	4	7115	2.0	2.5	2.2	1.2	7144	chr2L	7343330	intron	Wnt6 +	chr2L	7346902	intron	Wnt6 +	chr2L	7350474	intron	Wnt6 +	chr2L_4_7345001	chr2L_7345001	RAL-705
140	chr2L	7959041	7959055	chr2L	7960452	7960465	pogo	6	1411	3.5	4.5	4.0	1.2	1424	chr2L	7959041	intron	Snoo -	chr2L	7959753	intron	Snoo -	chr2L	7960465	intron	Snoo -	chr2L_6_7955001	chr2L_7955001	RAL-705
142	chr2L	8013616	8013634	chr2L	8018820	8018837	copia	5	5203	2.5	0.0	1.2	2.3	5221	chr2L	8013616	intron	Tg +	chr2L	8016226	intron	Tg +	chr2L	8018837	intron	Tg +	chr2L_5_8015001	chr2L_8015001	RAL-705
146	chr2L	8452424	8452451	chr2L	8461595	8461622	roo	9	9171	2.5	4.5	3.5	2.0	9198	chr2L	8452424	intron	fu12 -	chr2L	8457023	intron	fu12 -	chr2L	8461622	intron	fu12 -	chr2L_9_8455001	chr2L_8455001	RAL-705
152	chr2L	8723116	8723145	chr2L	8731493	8731521	Tirant	10	8377	0.5	0.0	0.2	8.3	8405	chr2L	8723116	intron	raw -	chr2L	8727318	intron	raw -	chr2L	8731521	intron	raw -	chr2L_10_8725001	chr2L_8725001	RAL-705
157	chr2L	9000281	9000309	chr2L	9007791	9007819	roo	11	7510	4.5	3.0	3.8	2.3	7538	chr2L	9000281	intergenic	Try29F +	chr2L	9004050	intergenic	not near genes	chr2L	9007819	intergenic	not near genes	chr2L_11_9000001	chr2L_9000001	RAL-705
171	chr2L	9393505	9393528	chr2L	9396472	9396495	jockey	5	2967	1.5	0.5	1.0	2.5	2990	chr2L	9393505	intron	Shawl -	chr2L	9395000	intron	Shawl -	chr2L	9396495	intron	Shawl -	chr2L_5_9395001	chr2L_9395001	RAL-705
180	chr2L	9770772	9770794	chr2L	9770869	9770891	1360	4	97	3.5	3.0	3.2	1.0	119	chr2L	9770772	intron	ppk18 -	chr2L	9770832	intron	ppk18 -	chr2L	9770891	exon	ppk18 -	chr2L_4_9770001	chr2L_9770001	RAL-705
183	chr2L	9973728	9973754	chr2L	9980847	9980873	HMS-Beagle	9	7119	2.0	5.0	3.5	2.0	7145	chr2L	9973728	intergenic	not near genes	chr2L	9977300	intergenic	not near genes	chr2L	9980873	intergenic	not near genes	chr2L_9_9975001	chr2L_9975001	RAL-705
188	chr2L	10156341	10156355	chr2L	10163811	10163825	blood	5	7470	2.5	3.0	2.8	1.3	7484	chr2L	10156341	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160083	intron	CG44153 -	chr2L	10163825	intron	CG44153 -	chr2L_5_10160001	chr2L_10160001	RAL-705
196	chr2L	10592850	10592863	chr2L	10600512	10600525	opus	4	7662	0.5	1.5	1.0	2.0	7675	chr2L	10592850	intron	Trim9 +	chr2L	10596688	intron	Trim9 +	chr2L	10600525	intron	Trim9 +	chr2L_4_10595001	chr2L_10595001	RAL-705
203	chr2L	10862846	10862873	chr2L	10864460	10864487	Rt1c	6	1614	3.0	5.5	4.2	1.2	1641	chr2L	10862846	3` UTR	CR43807 -	chr2L	10863666	intron	CR43807 -	chr2L	10864487	3` UTR	CR43807 -	chr2L_6_10860001	chr2L_10860001	RAL-705
204	chr2L	10946949	10946976	chr2L	10956164	10956191	roo	5	9215	4.0	7.0	5.5	0.8	9242	chr2L	10946949	intron	dpr2 -	chr2L	10951570	intron	dpr2 -	chr2L	10956191	intron	dpr2 -	chr2L_5_10950001	chr2L_10950001	RAL-705
211	chr2L	11540584	11540610	chr2L	11547986	11548012	Tabor	5	7402	0.5	1.5	1.0	2.5	7428	chr2L	11540584	intergenic	not near genes	chr2L	11544298	intergenic	not near genes	chr2L	11548012	intergenic	not near genes	chr2L_5_11540001	chr2L_11540001	RAL-705
213	chr2L	11563641	11563659	chr2L	11568845	11568863	copia	7	5204	2.0	2.0	2.0	2.3	5222	chr2L	11563641	intergenic	not near genes	chr2L	11566252	intergenic	not near genes	chr2L	11568863	intergenic	not near genes	chr2L_7_11565001	chr2L_11565001	RAL-705
217	chr2L	11713510	11713540	chr2L	11720978	11721007	blood	5	7467	1.5	2.0	1.8	1.8	7497	chr2L	11713510	intergenic	not near genes	chr2L	11717258	intergenic	not near genes	chr2L	11721007	intergenic	CR44143 +	chr2L_5_11715001	chr2L_11715001	RAL-705
233	chr2L	12558325	12558343	chr2L	12565454	12565472	HMS-Beagle	7	7129	3.0	1.0	2.0	2.3	7147	chr2L	12558325	intergenic	not near genes	chr2L	12561898	intergenic	not near genes	chr2L	12565472	intergenic	not near genes	chr2L_7_12560001	chr2L_12560001	RAL-705
235	chr2L	12731054	12731084	chr2L	12735821	12735851	F-element	10	4767	2.5	2.5	2.5	2.9	4797	chr2L	12731054	intron	MRP +	chr2L	12733452	intron	MRP +	chr2L	12735851	intron	MRP +	chr2L_10_12730001	chr2L_12730001	RAL-705
236	chr2L	12739176	12739202	chr2L	12743957	12743983	Doc	6	4781	2.0	2.0	2.0	2.0	4807	chr2L	12739176	exon	MRP +	chr2L	12741580	intron	MRP +	chr2L	12743983	exon	MRP +	chr2L_6_12740001	chr2L_12740001	RAL-705
238	chr2L	12791602	12791633	chr2L	12795276	12795308	F-element	5	3675	2.5	2.5	2.5	1.4	3706	chr2L	12791602	intergenic	not near genes	chr2L	12793455	intergenic	not near genes	chr2L	12795308	intergenic	not near genes	chr2L_5_12790001	chr2L_12790001	RAL-705
240	chr2L	12861696	12861722	chr2L	12863163	12863189	hobo	10	1466	2.0	2.5	2.2	3.1	1493	chr2L	12861696	intergenic	not near genes	chr2L	12862442	intergenic	not near genes	chr2L	12863189	intergenic	not near genes	chr2L_10_12860001	chr2L_12860001	RAL-705
241	chr2L	12894028	12894053	chr2L	12895495	12895519	hobo	6	1467	4.0	1.5	2.8	1.6	1491	chr2L	12894028	intergenic	not near genes	chr2L	12894774	intergenic	not near genes	chr2L	12895519	intergenic	not near genes	chr2L_6_12890001	chr2L_12890001	RAL-705
242	chr2L	12933850	12933875	chr2L	12941317	12941341	blood	11	7467	3.5	3.0	3.2	2.6	7491	chr2L	12933850	intergenic	not near genes	chr2L	12937596	intergenic	not near genes	chr2L	12941341	intergenic	not near genes	chr2L_11_12935001	chr2L_12935001	RAL-705
250	chr2L	13241958	13241972	chr2L	13244342	13244356	BS	4	2384	2.5	1.0	1.8	1.4	2398	chr2L	13241958	5` UTR	CR45330 +	chr2L	13243157	intron	CR45330 +	chr2L	13244356	5` UTR	CR45330 +	chr2L_4_13240001	chr2L_13240001	RAL-705
252	chr2L	13405646	13405678	chr2L	13410443	13410475	Doc	14	4797	3.0	3.0	3.0	3.5	4829	chr2L	13405646	exon	CG7110 +	chr2L	13408060	intron	CG7110 +	chr2L	13410475	intron	CG7110 +	chr2L_14_13405001	chr2L_13405001	RAL-705
253	chr2L	13449462	13449492	chr2L	13456897	13456928	Quasimodo	6	7436	0.5	1.0	0.8	3.3	7466	chr2L	13449462	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453195	intron	CG42784 +	chr2L	13456928	intron	CG42784 +	chr2L_6_13450001	chr2L_13450001	RAL-705
254	chr2L	13481454	13481475	chr2L	13482061	13482082	jockey	8	607	4.0	7.0	5.5	1.2	628	chr2L	13481454	intron	CG42784 +	chr2L	13481768	intron	CG42784 +	chr2L	13482082	intron	CG42784 +	chr2L_8_13480001	chr2L_13480001	RAL-705
256	chr2L	13522140	13522165	chr2L	13527658	13527683	Transpac	6	5518	1.0	3.0	2.0	2.0	5543	chr2L	13522140	intron	B4 -	chr2L	13524912	intron	B4 -	chr2L	13527683	intron	B4 -	chr2L_6_13520001	chr2L_13520001	RAL-705
259	chr2L	13853082	13853110	chr2L	13862232	13862260	roo	9	9149	3.5	2.5	3.0	2.2	9178	chr2L	13853082	intron	CenG1A +	chr2L	13857671	intron	CenG1A +	chr2L	13862260	intron	CenG1A +	chr2L_9_13855001	chr2L_13855001	RAL-705
264	chr2L	14642570	14642602	chr2L	14651733	14651765	roo	9	9163	2.0	0.5	1.2	4.1	9195	chr2L	14642570	intron	osp -	chr2L	14647168	intron	osp -	chr2L	14651765	intron	osp -	chr2L_9_14645001	chr2L_14645001	RAL-705
273	chr2L	14889956	14889987	chr2L	14890381	14890412	jockey	11	425	2.5	1.0	1.8	3.9	456	chr2L	14889956	intergenic	not near genes	chr2L	14890184	intergenic	not near genes	chr2L	14890412	intergenic	not near genes	chr2L_11_14890001	chr2L_14890001	RAL-705
274	chr2L	14984384	14984394	chr2L	14991986	14991996	opus	7	7601	1.5	1.5	1.5	2.8	7612	chr2L	14984384	intron	mol -	chr2L	14988190	intron	mol -	chr2L	14991996	intron	mol -	chr2L_7_14985001	chr2L_14985001	RAL-705
283	chr2L	15586417	15586423	chr2L	15593469	15593475	297	4	7052	2.5	4.5	3.5	0.9	7058	chr2L	15586417	intergenic	not near genes	chr2L	15589946	intergenic	not near genes	chr2L	15593475	intergenic	not near genes	chr2L_4_15585001	chr2L_15585001	RAL-705
288	chr2L	15956028	15956056	chr2L	15957495	15957523	hobo	5	1467	1.5	4.0	2.8	1.3	1495	chr2L	15956028	intron	beat-Ib -	chr2L	15956776	intron	beat-Ib -	chr2L	15957523	intron	beat-Ib -	chr2L_5_15955001	chr2L_15955001	RAL-705
292	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	13	145889	14.5	13.5	14.0	0.9	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_13_16140001	chr2L_16140001	RAL-705
295	chr2L	16141173	16141192	chr2L	16146380	16146399	copia	7	5207	3.5	4.5	4.0	1.4	5226	chr2L	16141173	intergenic	not near genes	chr2L	16143786	intergenic	not near genes	chr2L	16146399	intergenic	not near genes	chr2L_7_16140001	chr2L_16140001	RAL-705
298	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	5	145889	14.5	13.5	14.0	0.3	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_5_16140001	chr2L_16140001	RAL-705
301	chr2L	16280253	16280281	chr2L	16281423	16281452	1360	6	1170	1.0	1.5	1.2	2.7	1199	chr2L	16280253	intron	crp -	chr2L	16280852	intron	crp -	chr2L	16281452	intron	crp -	chr2L_6_16280001	chr2L_16280001	RAL-705
310	chr2L	16958106	16958133	chr2L	16962894	16962921	Doc	6	4788	0.5	2.5	1.5	2.4	4815	chr2L	16958106	intergenic	not near genes	chr2L	16960514	intergenic	not near genes	chr2L	16962921	intergenic	not near genes	chr2L_6_16960001	chr2L_16960001	RAL-705
322	chr2L	17199156	17199188	chr2L	17200623	17200655	hobo	5	1467	0.5	1.0	0.8	2.8	1499	chr2L	17199156	intron	beat-IIIc -	chr2L	17199906	intron	beat-IIIc -	chr2L	17200655	intron	beat-IIIc -	chr2L_5_17195001	chr2L_17195001	RAL-705
331	chr2L	17819926	17819951	chr2L	17825129	17825153	copia	6	5202	2.0	1.5	1.8	2.1	5227	chr2L	17819926	intron	CadN2 -	chr2L	17822540	intron	CadN2 -	chr2L	17825153	intron	CadN2 -	chr2L_6_17820001	chr2L_17820001	RAL-705
333	chr2L	17911962	17911989	chr2L	17914139	17914167	pogo	5	2178	1.5	2.5	2.0	1.7	2205	chr2L	17911962	intergenic	not near genes	chr2L	17913064	intergenic	not near genes	chr2L	17914167	intergenic	CG43271 -	chr2L_5_17910001	chr2L_17910001	RAL-705
335	chr2L	17951943	17951970	chr2L	17953410	17953437	hobo	15	1467	4.0	3.0	3.5	3.3	1494	chr2L	17951943	intergenic	CR44398 -,CR44397 -	chr2L	17952690	intergenic	not near genes	chr2L	17953437	intergenic	not near genes	chr2L_15_17950001	chr2L_17950001	RAL-705
337	chr2L	18051877	18051909	chr2L	18061024	18061055	roo	7	9147	2.0	2.5	2.2	2.2	9178	chr2L	18051877	intron	rdo +	chr2L	18056466	intron	rdo +	chr2L	18061055	intron	rdo +	chr2L_7_18055001	chr2L_18055001	RAL-705
342	chr2L	18408027	18408032	chr2L	18412811	18412816	Doc	4	4783	6.5	0.0	3.2	1.0	4789	chr2L	18408027	intergenic	not near genes	chr2L	18410422	intergenic	not near genes	chr2L	18412816	intergenic	not near genes	chr2L_4_18410001	chr2L_18410001	RAL-705
350	chr2L	19345014	19345046	chr2L	19357221	19357247	blood	8	12208	3.0	3.5	3.2	1.9	12233	chr2L	19345014	intron	dnt -	chr2L	19351130	intron	dnt -	chr2L	19357247	intron	dnt -	chr2L_8_19350001	chr2L_19350001	RAL-705
360	chr2L	19620093	19620131	chr2L	19621081	19621118	jockey	14	988	2.0	2.0	2.0	4.7	1025	chr2L	19620093	intron	Lar +	chr2L	19620606	intron	Lar +	chr2L	19621118	intron	Lar +	chr2L_14_19620001	chr2L_19620001	RAL-705
361	chr2L	19652570	19652588	chr2L	19674004	19674022	opus	4	21434	3.0	2.0	2.5	1.1	21452	chr2L	19652570	intron	Lar +	chr2L	19663296	intron	Lar +	chr2L	19674022	intron	Lar +	chr2L_4_19660001	chr2L_19660001	RAL-705
362	chr2L	19703538	19703569	chr2L	19712674	19712705	roo	12	9136	2.0	5.0	3.5	2.7	9167	chr2L	19703538	intron	Lar +	chr2L	19708122	intron	Lar +	chr2L	19712705	intron	Lar +	chr2L_12_19705001	chr2L_19705001	RAL-705
363	chr2L	19737351	19737383	chr2L	19740820	19740846	1360	6	3467	0.5	1.5	1.0	3.0	3495	chr2L	19737351	intergenic	Nf-YB +	chr2L	19739098	intergenic	not near genes	chr2L	19740846	intergenic	not near genes	chr2L_6_19735001	chr2L_19735001	RAL-705
364	chr2L	19762813	19762838	chr2L	19763055	19763080	pogo	6	242	1.0	1.5	1.2	2.7	267	chr2L	19762813	5` UTR	fbp -	chr2L	19762946	intron	fbp -	chr2L	19763080	intron	fbp -	chr2L_6_19760001	chr2L_19760001	RAL-705
369	chr2L	20005874	20005905	chr2L	20010950	20010981	flea	4	5075	2.0	3.5	2.8	1.1	5107	chr2L	20005874	intron	CG43861 -	chr2L	20008428	intron	CG43861 -	chr2L	20010981	intron	CG43861 -	chr2L_4_20005001	chr2L_20005001	RAL-705
376	chr2L	20272119	20272145	chr2L	20282830	20282854	copia	6	10710	5.0	6.5	5.8	0.9	10735	chr2L	20272119	intergenic	not near genes	chr2L	20277486	intergenic	not near genes	chr2L	20282854	intergenic	not near genes	chr2L_6_20275001	chr2L_20275001	RAL-705
379	chr2L	20303162	20303183	chr2L	20310630	20310651	blood	4	7468	0.5	0.5	0.5	2.7	7489	chr2L	20303162	intergenic	not near genes	chr2L	20306906	intergenic	not near genes	chr2L	20310651	intergenic	not near genes	chr2L_4_20305001	chr2L_20305001	RAL-705
391	chr2L	20568665	20568684	chr2L	20569055	20569073	X-element	5	390	3.5	3.0	3.2	1.2	408	chr2L	20568665	intron	CR45347 +	chr2L	20568869	intron	CR45347 +	chr2L	20569073	intron	CR45347 +	chr2L_5_20565001	chr2L_20565001	RAL-705
392	chr2L	20576218	20576239	chr2L	20583687	20583707	blood	9	7468	4.0	0.5	2.2	2.8	7489	chr2L	20576218	intergenic	CR45347 +	chr2L	20579962	intergenic	not near genes	chr2L	20583707	3` UTR	CR44909 -	chr2L_9_20575001	chr2L_20575001	RAL-705
396	chr2L	20639525	20639531	chr2L	20639801	20639807	INE-1	4	276	1.5	5.0	3.2	1.0	282	chr2L	20639525	intergenic	not near genes	chr2L	20639666	intergenic	CG31680 +	chr2L	20639807	intergenic	CG31680 +	chr2L_4_20635001	chr2L_20635001	RAL-705
401	chr2L	20976641	20976675	chr2L	20981456	20981490	X-element	7	4815	1.0	3.5	2.2	2.2	4849	chr2L	20976641	intron	CG42238 -	chr2L	20979066	intron	CG42238 -	chr2L	20981490	intron	CG42238 -	chr2L_7_20975001	chr2L_20975001	RAL-705
403	chr2L	21020271	21020303	chr2L	21023948	21023980	NOF	8	3677	1.5	3.5	2.5	2.3	3709	chr2L	21020271	intron	CG42238 -	chr2L	21022126	intron	CG42238 -	chr2L	21023980	intron	CG42238 -	chr2L_8_21020001	chr2L_21020001	RAL-705
404	chr2L	21041134	21041168	chr2L	21049395	21049429	Tirant	8	8261	1.5	2.5	2.0	2.7	8295	chr2L	21041134	intron	CG42238 -	chr2L	21045282	intron	CG42238 -	chr2L	21049429	intron	CG42238 -	chr2L_8_21045001	chr2L_21045001	RAL-705
414	chr2L	21981692	21981712	chr2L	21990857	21990877	roo	6	9165	2.5	2.5	2.5	1.7	9185	chr2L	21981692	exon	CG2528 -	chr2L	21986284	intron	CG2528 -	chr2L	21990877	exon	CG2528 -	chr2L_6_21985001	chr2L_21985001	RAL-705
419	chr2L	22548924	22548942	chr2L	22550148	22550167	1360	10	1225	0.0	5.0	2.5	2.9	1243	chr2L	22548924	intergenic	CG17490 +	chr2L	22549546	intergenic	not near genes	chr2L	22550167	intergenic	CG17493 +	chr2L_10_22545001	chr2L_22545001	RAL-705
420	chr2L	22581980	22581993	chr2L	22583769	22583782	S-element	5	1789	1.0	1.0	1.0	2.5	1802	chr2L	22581980	intron	CG17494 +	chr2L	22582881	intron	CG17494 +	chr2L	22583782	intron	CG17494 +	chr2L_5_22580001	chr2L_22580001	RAL-705
421	chr2L	22679801	22679832	chr2L	22684573	22684604	F-element	10	4772	1.0	3.5	2.2	3.1	4803	chr2L	22679801	intron	CG40006 -	chr2L	22682202	intron	CG40006 -	chr2L	22684604	intron	CG40006 -	chr2L_10_22680001	chr2L_22680001	RAL-705
423	chr2L	22776425	22776447	chr2L	22778214	22778236	S-element	5	1789	1.0	1.5	1.2	2.3	1811	chr2L	22776425	intergenic	not near genes	chr2L	22777330	intergenic	not near genes	chr2L	22778236	intergenic	not near genes	chr2L_5_22775001	chr2L_22775001	RAL-705
425	chr2R	529327	529357	chr2R	537952	537980	Max-element	16	8625	5.5	4.0	4.8	2.8	8653	chr2R	529327	intron	CG40378 +	chr2R	533654	intron	CG40378 +	chr2R	537980	intron	CG40378 +	chr2R_16_530001	chr2R_530001	RAL-705
426	chr2R	552756	552781	chr2R	553974	553999	1360	6	1217	2.5	1.5	2.0	2.0	1243	chr2R	552756	intron	CG40378 +	chr2R	553378	intron	CG40378 +	chr2R	553999	intron	CG40378 +	chr2R_6_550001	chr2R_550001	RAL-705
436	chr2R	4622955	4622976	chr2R	4624112	4624134	1360	5	1158	2.0	1.5	1.8	1.8	1179	chr2R	4622955	intergenic	CR44101 -	chr2R	4623544	intergenic	not near genes	chr2R	4624134	intergenic	not near genes	chr2R_5_4620001	chr2R_4620001	RAL-705
441	chr2R	5417992	5418027	chr2R	5420624	5420659	Burdock	6	2632	2.0	1.0	1.5	2.4	2667	chr2R	5417992	intron	laccase2 +	chr2R	5419326	intron	laccase2 +	chr2R	5420659	intron	laccase2 +	chr2R_6_5415001	chr2R_5415001	RAL-705
449	chr2R	5869287	5869309	chr2R	5874363	5874384	flea	9	5075	4.0	6.5	5.2	1.5	5097	chr2R	5869287	intergenic	not near genes	chr2R	5871836	intergenic	not near genes	chr2R	5874384	intergenic	not near genes	chr2R_9_5870001	chr2R_5870001	RAL-705
456	chr2R	6096716	6096739	chr2R	6101913	6101936	BS	9	5197	3.0	4.5	3.8	1.9	5220	chr2R	6096716	intron	EcR -	chr2R	6099326	intron	EcR -	chr2R	6101936	intron	EcR -	chr2R_9_6095001	chr2R_6095001	RAL-705
460	chr2R	6579772	6579795	chr2R	6584858	6584881	flea	6	5086	2.0	3.0	2.5	1.7	5109	chr2R	6579772	intron	jing +	chr2R	6582326	intron	jing +	chr2R	6584881	intron	jing +	chr2R_6_6580001	chr2R_6580001	RAL-705
467	chr2R	6952169	6952182	chr2R	6959749	6959762	opus	4	7580	2.0	3.0	2.5	1.1	7593	chr2R	6952169	intron,intron	mim -,CheB42c -	chr2R	6955966	intron,intron	mim -,CheB42c -	chr2R	6959762	intron,intron	mim -,CheB42c -	chr2R_4_6955001	chr2R_6955001	RAL-705
469	chr2R	7196566	7196591	chr2R	7201340	7201366	F-element	7	4775	3.0	0.5	1.8	2.5	4800	chr2R	7196566	intron	pk +	chr2R	7198966	intron	pk +	chr2R	7201366	intron	pk +	chr2R_7_7195001	chr2R_7195001	RAL-705
470	chr2R	7235824	7235852	chr2R	7240916	7240944	jockey	14	5092	2.5	5.0	3.8	2.9	5120	chr2R	7235824	intergenic	not near genes	chr2R	7238384	intergenic	not near genes	chr2R	7240944	intergenic	not near genes	chr2R_14_7235001	chr2R_7235001	RAL-705
472	chr2R	7434899	7434925	chr2R	7439200	7439224	Juan	6	4301	4.0	5.5	4.8	1.0	4325	chr2R	7434899	intergenic	so +	chr2R	7437062	intergenic	not near genes	chr2R	7439224	intergenic	not near genes	chr2R_6_7435001	chr2R_7435001	RAL-705
474	chr2R	7608407	7608428	chr2R	7613609	7613631	I-element	5	5203	2.5	0.0	1.2	2.3	5224	chr2R	7608407	intron	CG1358 -	chr2R	7611019	intron	CG1358 -	chr2R	7613631	intron	CG1358 -	chr2R_5_7610001	chr2R_7610001	RAL-705
475	chr2R	7815680	7815704	chr2R	7822149	7822173	Burdock	7	6469	2.5	3.0	2.8	1.8	6493	chr2R	7815680	intergenic	CG1882 +	chr2R	7818926	intergenic	not near genes	chr2R	7822173	3` UTR	cathD -	chr2R_7_7815001	chr2R_7815001	RAL-705
477	chr2R	7869199	7869215	chr2R	7873984	7874001	Doc	6	4786	2.5	5.0	3.8	1.2	4802	chr2R	7869199	intron	Dgk -	chr2R	7871600	intron	Dgk -	chr2R	7874001	intron	Dgk -	chr2R_6_7870001	chr2R_7870001	RAL-705
486	chr2R	8160935	8160949	chr2R	8161025	8161038	1360	5	90	2.5	10.5	6.5	0.7	103	chr2R	8160935	intron	CG8708 -	chr2R	8160986	intron	CG8708 -	chr2R	8161038	intron	CG8708 -	chr2R_5_8160001	chr2R_8160001	RAL-705
489	chr2R	8330876	8330893	chr2R	8331362	8331379	roo	13	486	1.0	3.0	2.0	4.3	503	chr2R	8330876	intron	pdm3 +	chr2R	8331128	intron	pdm3 +	chr2R	8331379	intron	pdm3 +	chr2R_13_8330001	chr2R_8330001	RAL-705
491	chr2R	8398211	8398227	chr2R	8402992	8403008	Doc	8	4781	1.5	2.0	1.8	2.9	4797	chr2R	8398211	intron	CG2121 -	chr2R	8400610	intron	CG2121 -	chr2R	8403008	intron	CG2121 -	chr2R_8_8400001	chr2R_8400001	RAL-705
495	chr2R	8566029	8566061	chr2R	8566981	8567013	1360	8	952	3.0	1.5	2.2	2.5	984	chr2R	8566029	5` UTR	Cyp6a14 -	chr2R	8566521	5` UTR	Cyp6a14 -	chr2R	8567013	5` UTR	Cyp6a14 -	chr2R_8_8565001	chr2R_8565001	RAL-705
499	chr2R	8722763	8722784	chr2R	8723004	8723025	pogo	11	241	3.0	2.5	2.8	2.9	262	chr2R	8722763	intron	CG14767 -	chr2R	8722894	intron	CG14767 -	chr2R	8723025	intron	CG14767 -	chr2R_11_8720001	chr2R_8720001	RAL-705
504	chr2R	9212701	9212719	chr2R	9213183	9213205	roo	5	485	4.5	3.0	3.8	1.0	504	chr2R	9212701	intergenic	CR45309 +	chr2R	9212953	intergenic	CR45309 +	chr2R	9213205	5` UTR	CR45309 +	chr2R_5_9210001	chr2R_9210001	RAL-705
508	chr2R	9480081	9480107	chr2R	9490611	9490638	roo	5	10531	1.5	2.0	1.8	1.8	10557	chr2R	9480081	intergenic	not near genes	chr2R	9485360	intergenic	not near genes	chr2R	9490638	intergenic	not near genes	chr2R_5_9485001	chr2R_9485001	RAL-705
512	chr2R	9726615	9726635	chr2R	9734166	9734186	17.6	5	7551	2.5	1.5	2.0	1.7	7571	chr2R	9726615	intron	sqa -	chr2R	9730400	intron	sqa -	chr2R	9734186	intron	sqa -	chr2R_5_9730001	chr2R_9730001	RAL-705
523	chr2R	10585575	10585590	chr2R	10594158	10594173	Tirant	4	8583	1.0	2.0	1.5	1.6	8598	chr2R	10585575	intron	psq +	chr2R	10589874	intron	psq +	chr2R	10594173	intron	psq +	chr2R_4_10585001	chr2R_10585001	RAL-705
532	chr2R	10948027	10948061	chr2R	10955578	10955612	17.6	9	7550	0.5	4.5	2.5	2.6	7585	chr2R	10948027	intergenic	not near genes	chr2R	10951820	intergenic	not near genes	chr2R	10955612	intergenic	not near genes	chr2R_9_10950001	chr2R_10950001	RAL-705
533	chr2R	10979658	10979679	chr2R	10980130	10980150	297	7	472	2.0	0.0	1.0	3.5	492	chr2R	10979658	intergenic	not near genes	chr2R	10979904	intergenic	not near genes	chr2R	10980150	intergenic	not near genes	chr2R_7_10975001	chr2R_10975001	RAL-705
534	chr2R	11009814	11009848	chr2R	11018988	11019022	roo	10	9174	3.5	3.0	3.2	2.4	9208	chr2R	11009814	intron	luna -	chr2R	11014418	intron	luna -	chr2R	11019022	intron	luna -	chr2R_10_11010001	chr2R_11010001	RAL-705
537	chr2R	11207825	11207844	chr2R	11208018	11208036	BS	4	193	4.5	3.5	4.0	0.8	211	chr2R	11207825	intron	shn +	chr2R	11207930	intron	shn +	chr2R	11208036	intron	shn +	chr2R_4_11205001	chr2R_11205001	RAL-705
540	chr2R	11415520	11415548	chr2R	11418669	11418697	opus	8	3149	3.5	5.5	4.5	1.5	3177	chr2R	11415520	intron	Drip -	chr2R	11417108	intron	Drip -	chr2R	11418697	intron	Drip -	chr2R_8_11415001	chr2R_11415001	RAL-705
541	chr2R	11472648	11472677	chr2R	11473845	11473874	pogo	8	1197	2.5	2.5	2.5	2.3	1226	chr2R	11472648	intergenic	not near genes	chr2R	11473261	intergenic	not near genes	chr2R	11473874	intergenic	not near genes	chr2R_8_11470001	chr2R_11470001	RAL-705
560	chr2R	12501708	12501725	chr2R	12503867	12503881	Rt1c	5	2159	1.0	2.0	1.5	2.0	2173	chr2R	12501708	intron	fdl -	chr2R	12502794	intron	fdl -	chr2R	12503881	intron	fdl -	chr2R_5_12500001	chr2R_12500001	RAL-705
565	chr2R	12707522	12707549	chr2R	12715888	12715915	roo	6	8365	1.5	2.5	2.0	2.0	8393	chr2R	12707522	intron	CG42663 +	chr2R	12711718	intron	CG42663 +	chr2R	12715915	intron	CG42663 +	chr2R_6_12710001	chr2R_12710001	RAL-705
567	chr2R	12789295	12789325	chr2R	12797655	12797688	roo	7	8362	2.0	3.5	2.8	1.8	8393	chr2R	12789295	intron,3` UTR	sca +,CR45137 -	chr2R	12793492	intron,intron	sca +,CR45137 -	chr2R	12797688	intron,3` UTR	sca +,CR45137 -	chr2R_7_12790001	chr2R_12790001	RAL-705
568	chr2R	12819456	12819475	chr2R	12824525	12824544	jockey	7	5069	3.0	2.0	2.5	2.0	5088	chr2R	12819456	intergenic	not near genes	chr2R	12822000	intergenic	not near genes	chr2R	12824544	intergenic	not near genes	chr2R_7_12820001	chr2R_12820001	RAL-705
572	chr2R	13136843	13136860	chr2R	13141641	13141658	Doc	6	4798	2.5	2.5	2.5	1.7	4815	chr2R	13136843	exon	Cap-G +	chr2R	13139250	intron	Cap-G +	chr2R	13141658	intron	Cap-G +	chr2R_6_13135001	chr2R_13135001	RAL-705
576	chr2R	13580496	13580517	chr2R	13580846	13580866	jockey	4	350	1.0	3.0	2.0	1.3	370	chr2R	13580496	3` UTR	CG6191 -	chr2R	13580681	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580866	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_4_13580001	chr2R_13580001	RAL-705
581	chr2R	13905602	13905629	chr2R	13907583	13907611	Rt1a	7	1982	3.0	1.5	2.2	2.2	2009	chr2R	13905602	intron	shot -	chr2R	13906606	intron	shot -	chr2R	13907611	intron	shot -	chr2R_7_13905001	chr2R_13905001	RAL-705
589	chr2R	14467309	14467326	chr2R	14476466	14476484	roo	5	9158	2.5	4.0	3.2	1.2	9175	chr2R	14467309	intergenic	not near genes	chr2R	14471896	intergenic	not near genes	chr2R	14476484	5` UTR	CR44462 +	chr2R_5_14470001	chr2R_14470001	RAL-705
593	chr2R	14889221	14889236	chr2R	14897829	14897844	Max-element	4	8608	4.0	0.0	2.0	1.3	8623	chr2R	14889221	intergenic	Cyp6a8 -	chr2R	14893532	intergenic	not near genes	chr2R	14897844	intergenic	not near genes	chr2R_4_14890001	chr2R_14890001	RAL-705
597	chr2R	15004725	15004760	chr2R	15005054	15005089	jockey	14	329	1.5	2.5	2.0	4.7	364	chr2R	15004725	intergenic	not near genes	chr2R	15004907	intergenic	not near genes	chr2R	15005089	intergenic	not near genes	chr2R_14_15000001	chr2R_15000001	RAL-705
598	chr2R	15015459	15015467	chr2R	15022883	15022891	mdg1	4	7424	5.0	0.0	2.5	1.1	7432	chr2R	15015459	intron	hbs +	chr2R	15019175	intron	hbs +	chr2R	15022891	intron	hbs +	chr2R_4_15015001	chr2R_15015001	RAL-705
600	chr2R	15084977	15085007	chr2R	15092026	15092054	297	12	7048	2.5	1.5	2.0	4.0	7077	chr2R	15084977	intergenic	not near genes	chr2R	15088516	intergenic	not near genes	chr2R	15092054	5` UTR	CR44457 +	chr2R_12_15085001	chr2R_15085001	RAL-705
602	chr2R	15119319	15119351	chr2R	15127800	15127832	Tirant	5	8481	1.0	4.0	2.5	1.4	8513	chr2R	15119319	intron	chn +	chr2R	15123576	intron	chn +	chr2R	15127832	intron	chn +	chr2R_5_15120001	chr2R_15120001	RAL-705
630	chr2R	17147253	17147276	chr2R	17152284	17152307	jockey	10	5031	1.5	5.5	3.5	2.2	5054	chr2R	17147253	intergenic	not near genes	chr2R	17149780	intergenic	not near genes	chr2R	17152307	intergenic	not near genes	chr2R_10_17145001	chr2R_17145001	RAL-705
631	chr2R	17176362	17176384	chr2R	17182552	17182573	diver	7	6190	0.5	2.0	1.2	3.2	6211	chr2R	17176362	intergenic	not near genes	chr2R	17179468	intergenic	not near genes	chr2R	17182573	intergenic	not near genes	chr2R_7_17175001	chr2R_17175001	RAL-705
634	chr2R	17485917	17485950	chr2R	17490687	17490720	F-element	10	4770	2.0	2.0	2.0	3.3	4803	chr2R	17485917	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488318	intron	NT5E-2 +	chr2R	17490720	intron	NT5E-2 +	chr2R_10_17485001	chr2R_17485001	RAL-705
637	chr2R	17784025	17784057	chr2R	17784266	17784298	pogo	10	241	1.5	2.5	2.0	3.3	273	chr2R	17784025	intergenic	mir-31a -	chr2R	17784162	intergenic	mir-31a -	chr2R	17784298	intergenic	mir-31a -	chr2R_10_17780001	chr2R_17780001	RAL-705
641	chr2R	18045667	18045700	chr2R	18046019	18046052	jockey	7	352	1.5	0.0	0.8	3.9	385	chr2R	18045667	intergenic	not near genes	chr2R	18045860	intergenic	not near genes	chr2R	18046052	intergenic	CG5767 -	chr2R_7_18045001	chr2R_18045001	RAL-705
643	chr2R	18111691	18111705	chr2R	18115559	18115572	F-element	6	3868	0.0	1.0	0.5	4.0	3881	chr2R	18111691	intergenic	not near genes	chr2R	18113632	intergenic	not near genes	chr2R	18115572	intergenic	not near genes	chr2R_6_18110001	chr2R_18110001	RAL-705
649	chr2R	18358395	18358421	chr2R	18372607	18372633	roo	6	14212	1.5	2.0	1.8	2.1	14238	chr2R	18358395	intergenic	not near genes	chr2R	18365514	intergenic	not near genes	chr2R	18372633	intergenic	not near genes	chr2R_6_18365001	chr2R_18365001	RAL-705
657	chr2R	18575805	18575831	chr2R	18581993	18582019	3S18	9	6187	4.0	4.0	4.0	1.8	6214	chr2R	18575805	intron	GEFmeso -	chr2R	18578912	intron	GEFmeso -	chr2R	18582019	intron	GEFmeso -	chr2R_9_18575001	chr2R_18575001	RAL-705
658	chr2R	18590874	18590895	chr2R	18600024	18600047	roo	8	9151	0.5	3.0	1.8	2.9	9173	chr2R	18590874	intron	GEFmeso -	chr2R	18595460	intron	GEFmeso -	chr2R	18600047	intron	GEFmeso -	chr2R_8_18595001	chr2R_18595001	RAL-705
675	chr2R	19776592	19776630	chr2R	19779915	19779953	jockey	9	3323	1.0	1.5	1.2	4.1	3361	chr2R	19776592	intergenic	not near genes	chr2R	19778272	intergenic	not near genes	chr2R	19779953	intergenic	not near genes	chr2R_9_19775001	chr2R_19775001	RAL-705
678	chr2R	19957432	19957448	chr2R	19962634	19962650	copia	6	5202	4.5	1.0	2.8	1.6	5218	chr2R	19957432	intergenic	CG44623 +	chr2R	19960041	intergenic	not near genes	chr2R	19962650	intergenic	not near genes	chr2R_6_19960001	chr2R_19960001	RAL-705
690	chr2R	20783316	20783331	chr2R	20788088	20788103	F-element	7	4772	2.0	5.0	3.5	1.6	4787	chr2R	20783316	intergenic	not near genes	chr2R	20785710	intergenic	not near genes	chr2R	20788103	intergenic	CG43666 -	chr2R_7_20785001	chr2R_20785001	RAL-705
707	chr2R	21738277	21738299	chr2R	21747437	21747458	roo	5	9159	1.5	3.5	2.5	1.4	9181	chr2R	21738277	intergenic	not near genes	chr2R	21742868	intergenic	not near genes	chr2R	21747458	intergenic	not near genes	chr2R_5_21740001	chr2R_21740001	RAL-705
708	chr2R	21753091	21753108	chr2R	21753575	21753593	roo	8	485	2.0	1.5	1.8	2.9	502	chr2R	21753091	intergenic	not near genes	chr2R	21753342	intergenic	not near genes	chr2R	21753593	intergenic	not near genes	chr2R_8_21750001	chr2R_21750001	RAL-705
714	chr2R	21809530	21809555	chr2R	21817769	21817795	roo	8	8240	2.0	3.0	2.5	2.3	8265	chr2R	21809530	intergenic	not near genes	chr2R	21813662	intergenic	not near genes	chr2R	21817795	intergenic	not near genes	chr2R_8_21810001	chr2R_21810001	RAL-705
723	chr2R	22349693	22349719	chr2R	22351477	22351500	jockey	4	1783	2.0	0.5	1.2	1.8	1807	chr2R	22349693	intron	Liprin-gamma -	chr2R	22350596	intron	Liprin-gamma -	chr2R	22351500	intron	Liprin-gamma -	chr2R_4_22350001	chr2R_22350001	RAL-705
724	chr2R	22360380	22360393	chr2R	22360813	22360826	jockey	6	433	2.0	2.5	2.2	1.9	446	chr2R	22360380	intron	Liprin-gamma -	chr2R	22360603	intron	Liprin-gamma -	chr2R	22360826	intron	Liprin-gamma -	chr2R_6_22360001	chr2R_22360001	RAL-705
725	chr2R	22525751	22525772	chr2R	22529305	22529327	jockey	10	3555	5.5	4.0	4.8	1.7	3576	chr2R	22525751	intron	px -	chr2R	22527539	intron	px -	chr2R	22529327	intron	px -	chr2R_10_22525001	chr2R_22525001	RAL-705
729	chr2R	22774959	22774985	chr2R	22775378	22775404	jockey	12	419	2.5	3.5	3.0	3.0	445	chr2R	22774959	intron	CG42260 -	chr2R	22775182	intron	CG42260 -	chr2R	22775404	intron	CG42260 -	chr2R_12_22775001	chr2R_22775001	RAL-705
741	chr2R	23402612	23402636	chr2R	23407687	23407711	flea	7	5075	2.0	4.0	3.0	1.8	5099	chr2R	23402612	intergenic	CG3520 -	chr2R	23405162	intergenic	not near genes	chr2R	23407711	intergenic	not near genes	chr2R_7_23405001	chr2R_23405001	RAL-705
745	chr2R	23529577	23529605	chr2R	23537153	23537181	412	6	7576	2.5	2.5	2.5	1.7	7604	chr2R	23529577	intron	bw -	chr2R	23533379	intron	bw -	chr2R	23537181	exon	bw -	chr2R_6_23530001	chr2R_23530001	RAL-705
750	chr2R	23914300	23914330	chr2R	23921923	23921951	412	9	7623	2.5	4.5	3.5	2.0	7651	chr2R	23914300	exon	kcc +	chr2R	23918126	intron	kcc +	chr2R	23921951	intron	kcc +	chr2R_9_23915001	chr2R_23915001	RAL-705
753	chr2R	24147068	24147098	chr2R	24154644	24154676	412	11	7577	3.0	1.5	2.2	3.4	7608	chr2R	24147068	intron	Dat +	chr2R	24150872	intron	Dat +	chr2R	24154676	intron	Dat +	chr2R_11_24150001	chr2R_24150001	RAL-705
754	chr2R	24177236	24177263	chr2R	24184721	24184748	412	12	7485	2.5	2.5	2.5	3.4	7512	chr2R	24177236	3` UTR	Nop60B +	chr2R	24180992	intron	Nop60B +	chr2R	24184748	3` UTR	Nop60B +	chr2R_12_24180001	chr2R_24180001	RAL-705
756	chr2R	24353429	24353457	chr2R	24361791	24361819	roo	7	8362	2.0	4.0	3.0	1.8	8390	chr2R	24353429	intron,intron	bs +,CR44811 -	chr2R	24357624	intron,intron	bs +,CR44811 -	chr2R	24361819	intron,intron	bs +,CR44811 -	chr2R_7_24355001	chr2R_24355001	RAL-705
763	chr2R	24727883	24727918	chr2R	24735391	24735424	mdg1	14	7507	1.5	3.0	2.2	4.4	7541	chr2R	24727883	intron	Mid1 -	chr2R	24731654	intron	Mid1 -	chr2R	24735424	intron	Mid1 -	chr2R_14_24730001	chr2R_24730001	RAL-705
764	chr2R	24763611	24763643	chr2R	24765584	24765619	G2	10	1976	4.0	2.0	3.0	2.5	2008	chr2R	24763611	exon	CG3894 +	chr2R	24764615	intron	CG3894 +	chr2R	24765619	exon	CG3894 +	chr2R_10_24760001	chr2R_24760001	RAL-705
771	chr2R	25141648	25141665	chr2R	25159338	25159355	roo	8	17689	2.5	4.0	3.2	1.9	17707	chr2R	25141648	intergenic	not near genes	chr2R	25150502	intergenic	not near genes	chr2R	25159355	intergenic	not near genes	chr2R_8_25150001	chr2R_25150001	RAL-705
778	chr3L	110210	110235	chr3L	119376	119402	roo	8	9167	4.0	1.5	2.8	2.1	9192	chr3L	110210	intergenic	not near genes	chr3L	114806	intergenic	not near genes	chr3L	119402	intergenic	not near genes	chr3L_8_110001	chr3L_110001	RAL-705
782	chr3L	402688	402715	chr3L	409740	409768	297	9	7052	1.0	2.5	1.8	3.2	7080	chr3L	402688	intergenic	not near genes	chr3L	406228	intergenic	not near genes	chr3L	409768	intergenic	not near genes	chr3L_9_405001	chr3L_405001	RAL-705
795	chr3L	857999	858021	chr3L	866480	866502	Tirant	5	8481	0.5	2.0	1.2	2.3	8503	chr3L	857999	intergenic	not near genes	chr3L	862250	intergenic	not near genes	chr3L	866502	5` UTR	CG12502 +	chr3L_5_860001	chr3L_860001	RAL-705
798	chr3L	925174	925206	chr3L	932600	932632	mdg1	12	7426	1.0	1.0	1.0	6.0	7458	chr3L	925174	intron	Glut1 +	chr3L	928903	intron	Glut1 +	chr3L	932632	intron	Glut1 +	chr3L_12_925001	chr3L_925001	RAL-705
799	chr3L	939770	939802	chr3L	940891	940923	jockey	14	1121	2.0	2.5	2.2	4.4	1153	chr3L	939770	intron	Glut1 +	chr3L	940346	intron	Glut1 +	chr3L	940923	intron	Glut1 +	chr3L_14_940001	chr3L_940001	RAL-705
807	chr3L	1154130	1154162	chr3L	1163280	1163312	roo	9	9150	1.0	2.0	1.5	3.6	9182	chr3L	1154130	intron	bab2 -	chr3L	1158721	intron	bab2 -	chr3L	1163312	intron	bab2 -	chr3L_9_1155001	chr3L_1155001	RAL-705
808	chr3L	1219599	1219623	chr3L	1227332	1227356	412	5	7733	2.0	4.0	3.0	1.2	7757	chr3L	1219599	intron	mwh +	chr3L	1223478	intron	mwh +	chr3L	1227356	intron	mwh +	chr3L_5_1220001	chr3L_1220001	RAL-705
810	chr3L	1505995	1506029	chr3L	1513592	1513624	17.6	12	7596	1.5	2.5	2.0	4.0	7629	chr3L	1505995	intron,intron	Psa +,cue -	chr3L	1509810	intron,intron	Psa +,cue -	chr3L	1513624	intron,intron	Psa +,cue -	chr3L_12_1505001	chr3L_1505001	RAL-705
813	chr3L	1740862	1740875	chr3L	1741105	1741118	pogo	4	243	4.0	2.5	3.2	1.0	256	chr3L	1740862	intron	Gk +	chr3L	1740990	intron	Gk +	chr3L	1741118	intron	Gk +	chr3L_4_1740001	chr3L_1740001	RAL-705
818	chr3L	2108251	2108279	chr3L	2113455	2113483	copia	5	5204	2.5	1.0	1.8	1.8	5232	chr3L	2108251	intron	sls -	chr3L	2110867	intron	sls -	chr3L	2113483	intron	sls -	chr3L_5_2110001	chr3L_2110001	RAL-705
822	chr3L	2447504	2447538	chr3L	2456660	2456694	roo	9	9156	2.5	3.5	3.0	2.2	9190	chr3L	2447504	intron	CG45186 +	chr3L	2452099	intron	CG45186 +	chr3L	2456694	intron	CG45186 +	chr3L_9_2450001	chr3L_2450001	RAL-705
833	chr3L	2751447	2751465	chr3L	2755742	2755760	F-element	4	4295	2.0	4.0	3.0	1.0	4313	chr3L	2751447	intron	Mrtf -	chr3L	2753604	intron	Mrtf -	chr3L	2755760	intron	Mrtf -	chr3L_4_2750001	chr3L_2750001	RAL-705
838	chr3L	3281457	3281471	chr3L	3281953	3281967	Doc	8	496	3.5	8.0	5.8	1.2	510	chr3L	3281457	intron	CG12017 +	chr3L	3281712	intron	CG12017 +	chr3L	3281967	intron	CG12017 +	chr3L_8_3280001	chr3L_3280001	RAL-705
841	chr3L	3475075	3475113	chr3L	3475519	3475555	jockey	9	444	2.0	4.0	3.0	2.2	480	chr3L	3475075	intron	CG42324 +	chr3L	3475315	intron	CG42324 +	chr3L	3475555	intron	CG42324 +	chr3L_9_3475001	chr3L_3475001	RAL-705
843	chr3L	3601299	3601332	chr3L	3606610	3606643	copia	5	5311	2.5	1.0	1.8	1.8	5344	chr3L	3601299	intron	Eip63E +	chr3L	3603971	intron	Eip63E +	chr3L	3606643	intron	Eip63E +	chr3L_5_3600001	chr3L_3600001	RAL-705
857	chr3L	4328742	4328765	chr3L	4336240	4336263	412	5	7498	1.5	4.0	2.8	1.3	7521	chr3L	4328742	intron	Cip4 -	chr3L	4332502	intron	Cip4 -	chr3L	4336263	intron	Cip4 -	chr3L_5_4330001	chr3L_4330001	RAL-705
862	chr3L	4901139	4901156	chr3L	4907329	4907346	diver	7	6190	1.5	0.0	0.8	3.9	6207	chr3L	4901139	intergenic	CG13704 +	chr3L	4904242	intergenic	not near genes	chr3L	4907346	intergenic	not near genes	chr3L_7_4900001	chr3L_4900001	RAL-705
864	chr3L	5034159	5034185	chr3L	5043308	5043336	roo	4	9151	2.5	1.5	2.0	1.3	9177	chr3L	5034159	intron	Con -	chr3L	5038748	intron	Con -	chr3L	5043336	intron	Con -	chr3L_4_5035001	chr3L_5035001	RAL-705
876	chr3L	5910033	5910064	chr3L	5910274	5910305	pogo	9	241	2.0	3.5	2.8	2.4	272	chr3L	5910033	intron	CG13288 +	chr3L	5910169	intron	CG13288 +	chr3L	5910305	intron	CG13288 +	chr3L_9_5910001	chr3L_5910001	RAL-705
877	chr3L	5926314	5926347	chr3L	5926504	5926537	BS	7	188	3.5	5.0	4.2	1.3	223	chr3L	5926314	intron	Vap-33B +	chr3L	5926426	intron	Vap-33B +	chr3L	5926537	intron	Vap-33B +	chr3L_7_5925001	chr3L_5925001	RAL-705
878	chr3L	6001680	6001717	chr3L	6004380	6004417	jockey	7	2700	3.5	1.5	2.5	2.0	2737	chr3L	6001680	intron	PVRAP +	chr3L	6003048	intron	PVRAP +	chr3L	6004417	intron	PVRAP +	chr3L_7_6000001	chr3L_6000001	RAL-705
879	chr3L	6040371	6040388	chr3L	6042727	6042744	Doc	5	2356	1.5	4.5	3.0	1.2	2373	chr3L	6040371	intergenic	Jon65Aiv +	chr3L	6041558	intergenic	not near genes	chr3L	6042744	intergenic	not near genes	chr3L_5_6040001	chr3L_6040001	RAL-705
884	chr3L	6220914	6220948	chr3L	6230066	6230100	roo	11	9152	2.0	3.5	2.8	2.9	9186	chr3L	6220914	5` UTR	pncr008:3L +	chr3L	6225507	intergenic	not near genes	chr3L	6230100	intergenic	not near genes	chr3L_11_6225001	chr3L_6225001	RAL-705
886	chr3L	6335008	6335035	chr3L	6335479	6335505	297	7	471	4.0	3.0	3.5	1.6	497	chr3L	6335008	intron	CG13300 -	chr3L	6335256	intron	CG13300 -	chr3L	6335505	intron	CG13300 -	chr3L_7_6335001	chr3L_6335001	RAL-705
891	chr3L	6781125	6781137	chr3L	6783138	6783150	Doc	5	2013	3.5	0.0	1.8	1.8	2025	chr3L	6781125	intergenic	not near genes	chr3L	6782138	intergenic	not near genes	chr3L	6783150	intergenic	not near genes	chr3L_5_6780001	chr3L_6780001	RAL-705
892	chr3L	6887517	6887542	chr3L	6895009	6895034	roo	5	7492	2.0	1.5	1.8	1.8	7517	chr3L	6887517	intergenic	not near genes	chr3L	6891276	intergenic	not near genes	chr3L	6895034	intergenic	not near genes	chr3L_5_6890001	chr3L_6890001	RAL-705
900	chr3L	7377328	7377347	chr3L	7380431	7380451	297	4	3104	1.5	5.0	3.2	1.0	3123	chr3L	7377328	intron	SMSr -	chr3L	7378890	intron	SMSr -	chr3L	7380451	intron	SMSr -	chr3L_4_7375001	chr3L_7375001	RAL-705
903	chr3L	7498761	7498789	chr3L	7503538	7503566	F-element	4	4777	1.0	2.5	1.8	1.4	4805	chr3L	7498761	5` UTR	CG8539 -	chr3L	7501164	intergenic	not near genes	chr3L	7503566	intergenic	not near genes	chr3L_4_7500001	chr3L_7500001	RAL-705
908	chr3L	7793710	7793735	chr3L	7800762	7800787	297	9	7052	2.0	1.0	1.5	3.6	7077	chr3L	7793710	intron	CG32369 -	chr3L	7797248	intron	CG32369 -	chr3L	7800787	intron	CG32369 -	chr3L_9_7795001	chr3L_7795001	RAL-705
912	chr3L	7886533	7886538	chr3L	7889050	7889056	Stalker4	6	2518	1.0	8.0	4.5	1.1	2523	chr3L	7886533	intron	CG32365 +	chr3L	7887794	intron	CG32365 +	chr3L	7889056	intron	CG32365 +	chr3L_6_7885001	chr3L_7885001	RAL-705
913	chr3L	7916830	7916862	chr3L	7926001	7926033	roo	9	9171	3.5	2.0	2.8	2.4	9203	chr3L	7916830	3` UTR	syd -	chr3L	7921432	intron	syd -	chr3L	7926033	3` UTR	syd -	chr3L_9_7920001	chr3L_7920001	RAL-705
915	chr3L	7985376	7985394	chr3L	7987703	7987722	NOF	9	2328	2.5	6.5	4.5	1.6	2346	chr3L	7985376	intron	nmo +	chr3L	7986549	intron	nmo +	chr3L	7987722	intron	nmo +	chr3L_9_7985001	chr3L_7985001	RAL-705
924	chr3L	8498305	8498324	chr3L	8505772	8505791	blood	4	7467	3.5	2.5	3.0	1.0	7486	chr3L	8498305	intron	CG43163 -	chr3L	8502048	intron	CG43163 -	chr3L	8505791	intron	CG43163 -	chr3L_4_8500001	chr3L_8500001	RAL-705
929	chr3L	8791286	8791300	chr3L	8796706	8796720	I-element	7	5420	4.0	5.0	4.5	1.3	5434	chr3L	8791286	exon	Fhos +	chr3L	8794003	intron	Fhos +	chr3L	8796720	intron	Fhos +	chr3L_7_8790001	chr3L_8790001	RAL-705
937	chr3L	9076926	9076951	chr3L	9084486	9084511	412	8	7560	4.0	1.5	2.8	2.1	7585	chr3L	9076926	exon	Tequila +	chr3L	9080718	intron	Tequila +	chr3L	9084511	exon	Tequila +	chr3L_8_9080001	chr3L_9080001	RAL-705
938	chr3L	9130556	9130577	chr3L	9134317	9134338	412	4	3761	5.0	1.0	3.0	1.0	3782	chr3L	9130556	intergenic	bol -	chr3L	9132447	intergenic	not near genes	chr3L	9134338	intergenic	Dhpr +	chr3L_4_9130001	chr3L_9130001	RAL-705
939	chr3L	9164701	9164731	chr3L	9166168	9166198	hobo	10	1467	2.0	1.0	1.5	4.0	1497	chr3L	9164701	intron	Rdl -	chr3L	9165450	intron	Rdl -	chr3L	9166198	intron	Rdl -	chr3L_10_9165001	chr3L_9165001	RAL-705
940	chr3L	9219243	9219282	chr3L	9219915	9219941	jockey	8	670	1.5	2.5	2.0	2.7	698	chr3L	9219243	intergenic	not near genes	chr3L	9219592	intergenic	not near genes	chr3L	9219941	intergenic	not near genes	chr3L_8_9215001	chr3L_9215001	RAL-705
947	chr3L	9501709	9501730	chr3L	9502195	9502216	roo	7	486	2.0	3.0	2.5	2.0	507	chr3L	9501709	intron	path -	chr3L	9501962	intron	path -	chr3L	9502216	intron	path -	chr3L_7_9500001	chr3L_9500001	RAL-705
950	chr3L	9526488	9526513	chr3L	9528168	9528193	Doc	6	1680	1.0	1.5	1.2	2.7	1705	chr3L	9526488	intergenic	not near genes	chr3L	9527340	intergenic	not near genes	chr3L	9528193	intergenic	not near genes	chr3L_6_9525001	chr3L_9525001	RAL-705
951	chr3L	9571918	9571928	chr3L	9572266	9572276	jockey	5	348	2.0	1.5	1.8	1.8	358	chr3L	9571918	intron	CG42673 +	chr3L	9572097	intron	CG42673 +	chr3L	9572276	intron	CG42673 +	chr3L_5_9570001	chr3L_9570001	RAL-705
952	chr3L	9575904	9575939	chr3L	9580984	9581017	jockey	5	5079	2.5	1.5	2.0	1.7	5113	chr3L	9575904	intron	CG42673 +	chr3L	9578460	intron	CG42673 +	chr3L	9581017	intron	CG42673 +	chr3L_5_9575001	chr3L_9575001	RAL-705
956	chr3L	9929675	9929698	chr3L	9938456	9938479	roo	8	8781	2.0	1.5	1.8	2.9	8804	chr3L	9929675	intron	CG34356 +	chr3L	9934077	intron	CG34356 +	chr3L	9938479	intron	CG34356 +	chr3L_8_9930001	chr3L_9930001	RAL-705
966	chr3L	10414940	10414967	chr3L	10417312	10417338	Doc	12	2371	2.0	3.5	2.8	3.2	2398	chr3L	10414940	intergenic	CG12362 +	chr3L	10416139	intergenic	not near genes	chr3L	10417338	intergenic	not near genes	chr3L_12_10415001	chr3L_10415001	RAL-705
975	chr3L	11087060	11087090	chr3L	11088849	11088877	S-element	6	1789	1.0	2.0	1.5	2.4	1817	chr3L	11087060	intron	JIL-1 -	chr3L	11087968	intron	JIL-1 -	chr3L	11088877	intron	JIL-1 -	chr3L_6_11085001	chr3L_11085001	RAL-705
976	chr3L	11105295	11105329	chr3L	11107006	11107040	X-element	10	1710	1.0	3.0	2.0	3.3	1745	chr3L	11105295	intergenic	not near genes	chr3L	11106168	intergenic	not near genes	chr3L	11107040	exon	CG32073 -	chr3L_10_11105001	chr3L_11105001	RAL-705
980	chr3L	11264464	11264497	chr3L	11271416	11271449	17.6	8	6952	2.0	2.0	2.0	2.7	6985	chr3L	11264464	intergenic	not near genes	chr3L	11267956	intergenic	not near genes	chr3L	11271449	intergenic	not near genes	chr3L_8_11265001	chr3L_11265001	RAL-705
983	chr3L	11329694	11329708	chr3L	11332896	11332911	jockey	8	3203	5.0	1.0	3.0	2.0	3217	chr3L	11329694	intergenic	not near genes	chr3L	11331302	intergenic	not near genes	chr3L	11332911	intergenic	not near genes	chr3L_8_11330001	chr3L_11330001	RAL-705
992	chr3L	11723089	11723114	chr3L	11727878	11727904	Doc	5	4793	1.5	2.0	1.8	1.8	4815	chr3L	11723089	3` UTR	Bmcp +	chr3L	11725496	intron	Bmcp +	chr3L	11727904	3` UTR	Bmcp +	chr3L_5_11725001	chr3L_11725001	RAL-705
1000	chr3L	11864553	11864584	chr3L	11865847	11865879	pogo	6	1294	4.0	6.5	5.2	1.0	1326	chr3L	11864553	intron	CG44837 -	chr3L	11865216	intron	CG44837 -	chr3L	11865879	intron	CG44837 -	chr3L_6_11865001	chr3L_11865001	RAL-705
1015	chr3L	12874932	12874961	chr3L	12877224	12877253	jockey	9	2292	1.5	3.5	2.5	2.6	2321	chr3L	12874932	intergenic	not near genes	chr3L	12876092	intergenic	not near genes	chr3L	12877253	intergenic	not near genes	chr3L_9_12875001	chr3L_12875001	RAL-705
1019	chr3L	12919279	12919293	chr3L	12924763	12924775	Rt1c	5	5483	1.5	0.0	0.8	2.8	5496	chr3L	12919279	intergenic	not near genes	chr3L	12922027	intergenic	not near genes	chr3L	12924775	intergenic	not near genes	chr3L_5_12920001	chr3L_12920001	RAL-705
1020	chr3L	12957786	12957819	chr3L	12962268	12962301	copia	8	4482	3.0	3.0	3.0	2.0	4515	chr3L	12957786	intergenic	not near genes	chr3L	12960044	intergenic	not near genes	chr3L	12962301	intergenic	not near genes	chr3L_8_12960001	chr3L_12960001	RAL-705
1031	chr3L	13525154	13525190	chr3L	13532950	13532986	roo	15	7796	3.0	4.0	3.5	3.3	7832	chr3L	13525154	intergenic	not near genes	chr3L	13529070	intergenic	not near genes	chr3L	13532986	intergenic	not near genes	chr3L_15_13525001	chr3L_13525001	RAL-705
1034	chr3L	13804547	13804570	chr3L	13822832	13822855	roo	9	18286	5.0	2.5	3.8	1.9	18308	chr3L	13804547	intergenic	not near genes	chr3L	13813701	intergenic	not near genes	chr3L	13822855	intergenic	not near genes	chr3L_9_13810001	chr3L_13810001	RAL-705
1041	chr3L	14245574	14245587	chr3L	14245667	14245680	1360	4	94	2.5	0.0	1.2	1.8	106	chr3L	14245574	3` UTR	CR44561 -	chr3L	14245627	3` UTR	CR44561 -	chr3L	14245680	3` UTR	CR44561 -	chr3L_4_14245001	chr3L_14245001	RAL-705
1043	chr3L	14295980	14296014	chr3L	14296466	14296500	roo	9	486	0.5	1.0	0.8	5.0	520	chr3L	14295980	intron	fz +	chr3L	14296240	intron	fz +	chr3L	14296500	intron	fz +	chr3L_9_14295001	chr3L_14295001	RAL-705
1044	chr3L	14312030	14312051	chr3L	14316844	14316865	X-element	4	4814	1.5	2.5	2.0	1.3	4835	chr3L	14312030	exon	fz +	chr3L	14314448	intron	fz +	chr3L	14316865	intron	fz +	chr3L_4_14310001	chr3L_14310001	RAL-705
1046	chr3L	14468449	14468477	chr3L	14473653	14473683	copia	6	5206	2.0	2.0	2.0	2.0	5234	chr3L	14468449	intron	bbg -	chr3L	14471066	intron	bbg -	chr3L	14473683	intron	bbg -	chr3L_6_14470001	chr3L_14470001	RAL-705
1048	chr3L	14514693	14514694	chr3L	22908067	22908067	Stalker2	7	8393374	12.0	13.0	12.5	0.5	8393374	chr3L	14514693	intron	bbg -	chr3L	18711380	intergenic	not near genes	chr3L	22908067	intergenic	not near genes	chr3L_7_18710001	chr3L_18710001	RAL-705
1050	chr3L	14721183	14721192	chr3L	14723026	14723035	Rt1c	6	1843	5.0	3.0	4.0	1.2	1852	chr3L	14721183	intron	ome +	chr3L	14722109	intron	ome +	chr3L	14723035	intron	ome +	chr3L_6_14720001	chr3L_14720001	RAL-705
1051	chr3L	14725610	14725624	chr3L	14728604	14728618	Doc	4	2994	2.0	5.5	3.8	0.8	3008	chr3L	14725610	intron	ome +	chr3L	14727114	intron	ome +	chr3L	14728618	intron	ome +	chr3L_4_14725001	chr3L_14725001	RAL-705
1068	chr3L	15554921	15554952	chr3L	15556708	15556739	S-element	6	1787	1.0	1.0	1.0	3.0	1818	chr3L	15554921	intron	AGO2 +	chr3L	15555830	intron	AGO2 +	chr3L	15556739	intron	AGO2 +	chr3L_6_15555001	chr3L_15555001	RAL-705
1079	chr3L	15899232	15899261	chr3L	15899799	15899827	jockey	9	567	2.0	5.5	3.8	1.9	595	chr3L	15899232	intergenic	pHCl -	chr3L	15899530	intergenic	not near genes	chr3L	15899827	intergenic	sff -	chr3L_9_15895001	chr3L_15895001	RAL-705
1084	chr3L	16184105	16184137	chr3L	16188924	16188954	X-element	13	4819	1.0	1.0	1.0	6.5	4849	chr3L	16184105	intergenic	not near genes	chr3L	16186530	intergenic	not near genes	chr3L	16188954	intergenic	not near genes	chr3L_13_16185001	chr3L_16185001	RAL-705
1091	chr3L	16443851	16443870	chr3L	16446191	16446210	Doc	5	2340	3.0	4.5	3.8	1.0	2359	chr3L	16443851	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445030	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446210	intron,intron	CG33158 +,dsx-c73A -	chr3L_5_16445001	chr3L_16445001	RAL-705
1092	chr3L	16493989	16494013	chr3L	16494506	16494530	jockey	7	516	5.0	5.0	5.0	1.2	541	chr3L	16493989	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494260	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494530	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_7_16490001	chr3L_16490001	RAL-705
1098	chr3L	16616513	16616538	chr3L	16621841	16621866	297	6	5328	3.5	1.0	2.2	1.9	5353	chr3L	16616513	3` UTR	Abl -	chr3L	16619190	3` UTR	Abl -	chr3L	16621866	3` UTR	Abl -	chr3L_6_16615001	chr3L_16615001	RAL-705
1102	chr3L	16945727	16945761	chr3L	16954880	16954913	roo	14	9152	5.5	0.0	2.8	3.7	9186	chr3L	16945727	exon	Obp73a +	chr3L	16950320	intergenic	not near genes	chr3L	16954913	5` UTR	Nc73EF +	chr3L_14_16950001	chr3L_16950001	RAL-705
1110	chr3L	17799817	17799842	chr3L	17801604	17801629	S-element	4	1786	0.5	3.0	1.8	1.4	1812	chr3L	17799817	intron	NUCB1 -	chr3L	17800723	intron	NUCB1 -	chr3L	17801629	intron	NUCB1 -	chr3L_4_17800001	chr3L_17800001	RAL-705
1118	chr3L	18047718	18047734	chr3L	18056775	18056791	roo	6	9057	1.0	3.0	2.0	2.0	9073	chr3L	18047718	intron	Eip75B -	chr3L	18052254	intron	Eip75B -	chr3L	18056791	intron	Eip75B -	chr3L_6_18050001	chr3L_18050001	RAL-705
1129	chr3L	18506129	18506155	chr3L	18509591	18509618	F-element	8	3462	3.5	3.5	3.5	1.8	3489	chr3L	18506129	intergenic	not near genes	chr3L	18507874	intergenic	not near genes	chr3L	18509618	intergenic	not near genes	chr3L_8_18505001	chr3L_18505001	RAL-705
1130	chr3L	18528631	18528661	chr3L	18537792	18537822	roo	4	9161	2.5	2.0	2.2	1.2	9191	chr3L	18528631	intergenic	not near genes	chr3L	18533226	intergenic	not near genes	chr3L	18537822	intergenic	not near genes	chr3L_4_18530001	chr3L_18530001	RAL-705
1132	chr3L	18593954	18593979	chr3L	18595934	18595959	Doc	8	1980	0.5	0.0	0.2	6.7	2005	chr3L	18593954	intergenic	term -	chr3L	18594956	intergenic	not near genes	chr3L	18595959	intergenic	CR45389 +	chr3L_8_18590001	chr3L_18590001	RAL-705
1136	chr3L	18772420	18772436	chr3L	18781101	18781117	roo	5	8681	3.5	1.5	2.5	1.4	8697	chr3L	18772420	intron	ftz-f1 -	chr3L	18776768	intron	ftz-f1 -	chr3L	18781117	intron	ftz-f1 -	chr3L_5_18775001	chr3L_18775001	RAL-705
1139	chr3L	18833779	18833805	chr3L	18834943	18834969	1360	5	1162	4.0	2.0	3.0	1.2	1190	chr3L	18833779	intron	Indy -	chr3L	18834374	intron	Indy -	chr3L	18834969	intron	Indy -	chr3L_5_18830001	chr3L_18830001	RAL-705
1142	chr3L	19008845	19008869	chr3L	19009183	19009207	jockey	10	338	3.5	3.0	3.2	2.4	362	chr3L	19008845	intron	nkd -	chr3L	19009026	intron	nkd -	chr3L	19009207	intron	nkd -	chr3L_10_19005001	chr3L_19005001	RAL-705
1146	chr3L	19115635	19115665	chr3L	19115815	19115845	BS	9	180	2.5	2.0	2.2	2.8	210	chr3L	19115635	intron	CG14082 -	chr3L	19115740	intron	CG14082 -	chr3L	19115845	intron	CG14082 -	chr3L_9_19115001	chr3L_19115001	RAL-705
1147	chr3L	19117052	19117062	chr3L	19124498	19124509	mdg1	8	7446	5.5	3.0	4.2	1.5	7457	chr3L	19117052	intron	CG14082 -	chr3L	19120780	intron	CG14082 -	chr3L	19124509	intron	CG14082 -	chr3L_8_19120001	chr3L_19120001	RAL-705
1149	chr3L	19208056	19208082	chr3L	19209430	19209456	Doc	11	1374	4.5	1.5	3.0	2.8	1400	chr3L	19208056	intron	fz2 -	chr3L	19208756	intron	fz2 -	chr3L	19209456	intron	fz2 -	chr3L_11_19205001	chr3L_19205001	RAL-705
1160	chr3L	19848509	19848535	chr3L	19857692	19857725	roo	9	9189	1.5	3.5	2.5	2.6	9216	chr3L	19848509	intron	Papss +	chr3L	19853117	intron	Papss +	chr3L	19857725	intron	Papss +	chr3L_9_19850001	chr3L_19850001	RAL-705
1167	chr3L	20113658	20113681	chr3L	20122915	20122938	roo	5	9257	2.0	2.0	2.0	1.7	9280	chr3L	20113658	intergenic	not near genes	chr3L	20118298	intergenic	not near genes	chr3L	20122938	intergenic	not near genes	chr3L_5_20115001	chr3L_20115001	RAL-705
1169	chr3L	20257339	20257359	chr3L	20258459	20258479	pogo	5	1119	1.5	6.0	3.8	1.0	1140	chr3L	20257339	intron	rdgC +	chr3L	20257909	intron	rdgC +	chr3L	20258479	intron	rdgC +	chr3L_5_20255001	chr3L_20255001	RAL-705
1173	chr3L	20476758	20476776	chr3L	20484357	20484374	springer	4	7598	3.5	7.5	5.5	0.6	7616	chr3L	20476758	3` UTR	isoQC +	chr3L	20480566	intergenic	not near genes	chr3L	20484374	3` UTR	ZnT77C -	chr3L_4_20480001	chr3L_20480001	RAL-705
1174	chr3L	20590064	20590090	chr3L	20590603	20590629	412	5	538	1.5	3.0	2.2	1.6	565	chr3L	20590064	intergenic	not near genes	chr3L	20590346	intergenic	not near genes	chr3L	20590629	intergenic	not near genes	chr3L_5_20590001	chr3L_20590001	RAL-705
1177	chr3L	20821296	20821308	chr3L	20824764	20824777	NOF	4	3468	3.0	2.5	2.8	1.1	3481	chr3L	20821296	intron	Pka-R1 +	chr3L	20823036	intron	Pka-R1 +	chr3L	20824777	intron	Pka-R1 +	chr3L_4_20820001	chr3L_20820001	RAL-705
1181	chr3L	21014919	21014944	chr3L	21023399	21023424	Tirant	7	8480	1.5	4.0	2.8	1.8	8505	chr3L	21014919	intron	skd -	chr3L	21019172	intron	skd -	chr3L	21023424	intron	skd -	chr3L_7_21015001	chr3L_21015001	RAL-705
1182	chr3L	21151863	21151889	chr3L	21156947	21156973	flea	8	5084	3.5	2.0	2.8	2.1	5110	chr3L	21151863	intron	Ac78C -	chr3L	21154418	intron	Ac78C -	chr3L	21156973	intron	Ac78C -	chr3L_8_21150001	chr3L_21150001	RAL-705
1185	chr3L	21243747	21243768	chr3L	21251310	21251331	412	4	7563	2.5	1.5	2.0	1.3	7584	chr3L	21243747	intron	Eip78C +	chr3L	21247539	intron	Eip78C +	chr3L	21251331	intron	Eip78C +	chr3L_4_21245001	chr3L_21245001	RAL-705
1186	chr3L	21306148	21306178	chr3L	21315307	21315337	roo	5	9159	2.5	2.5	2.5	1.4	9189	chr3L	21306148	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310742	intron	Pc -	chr3L	21315337	3` UTR	Pc -	chr3L_5_21310001	chr3L_21310001	RAL-705
1187	chr3L	21498854	21498862	chr3L	21500490	21500498	1360	5	1636	2.0	9.0	5.5	0.8	1644	chr3L	21498854	intron	Glg1 -	chr3L	21499676	intron	Glg1 -	chr3L	21500498	intron	Glg1 -	chr3L_5_21495001	chr3L_21495001	RAL-705
1197	chr3L	21952453	21952483	chr3L	21953196	21953225	transib1	8	743	0.5	1.0	0.8	4.4	772	chr3L	21952453	intergenic	not near genes	chr3L	21952839	intergenic	not near genes	chr3L	21953225	intergenic	not near genes	chr3L_8_21950001	chr3L_21950001	RAL-705
1201	chr3L	22099674	22099704	chr3L	22105860	22105890	3S18	7	6186	4.5	2.5	3.5	1.6	6216	chr3L	22099674	intergenic	not near genes	chr3L	22102782	intergenic	not near genes	chr3L	22105890	intergenic	not near genes	chr3L_7_22100001	chr3L_22100001	RAL-705
1211	chr3L	22555772	22555791	chr3L	22563239	22563261	blood	6	7467	2.5	1.0	1.8	2.1	7489	chr3L	22555772	intergenic	not near genes	chr3L	22559516	intergenic	not near genes	chr3L	22563261	intergenic	not near genes	chr3L_6_22555001	chr3L_22555001	RAL-705
1213	chr3L	22577621	22577649	chr3L	22582409	22582431	Doc	13	4787	2.5	5.0	3.8	2.7	4810	chr3L	22577621	intergenic	not near genes	chr3L	22580026	intergenic	not near genes	chr3L	22582431	3` UTR	CG14459 -	chr3L_13_22580001	chr3L_22580001	RAL-705
1214	chr3L	22617188	22617218	chr3L	22624640	22624670	blood	11	7452	3.5	1.5	2.5	3.1	7482	chr3L	22617188	intron	CG14459 -	chr3L	22620929	intron	CG14459 -	chr3L	22624670	intron	CG14459 -	chr3L_11_22620001	chr3L_22620001	RAL-705
1217	chr3L	22761393	22761418	chr3L	22766827	22766852	Ivk	9	5434	5.0	6.0	5.5	1.4	5459	chr3L	22761393	intron	SPoCk +	chr3L	22764122	intron	SPoCk +	chr3L	22766852	intron	SPoCk +	chr3L_9_22760001	chr3L_22760001	RAL-705
1218	chr3L	22865982	22866011	chr3L	22867115	22867144	Doc	11	1133	2.0	2.0	2.0	3.7	1162	chr3L	22865982	intron	CG33170 +	chr3L	22866563	intron	CG33170 +	chr3L	22867144	intron	CG33170 +	chr3L_11_22865001	chr3L_22865001	RAL-705
1223	chr3L	22989864	22989889	chr3L	22996838	22996863	297	4	6974	1.5	1.5	1.5	1.6	6999	chr3L	22989864	intergenic	not near genes	chr3L	22993364	intergenic	not near genes	chr3L	22996863	intergenic	not near genes	chr3L_4_22990001	chr3L_22990001	RAL-705
1225	chr3L	23042229	23042258	chr3L	23048978	23049008	gypsy6	6	6752	3.5	2.0	2.8	1.6	6779	chr3L	23042229	intergenic	not near genes	chr3L	23045618	intergenic	not near genes	chr3L	23049008	intergenic	not near genes	chr3L_6_23045001	chr3L_23045001	RAL-705
1226	chr3L	23062894	23062900	chr3L	25074004	25074010	Tirant	4	2011110	9.0	16.0	12.5	0.3	2011116	chr3L	23062894	intergenic	not near genes	chr3L	24068452	intergenic	not near genes	chr3L	25074010	intergenic	not near genes	chr3L_4_24065001	chr3L_24065001	RAL-705
1230	chr3L	24012419	24012437	chr3L	24020760	24020778	roo	4	8341	0.5	2.0	1.2	1.8	8359	chr3L	24012419	intergenic	not near genes	chr3L	24016598	intergenic	not near genes	chr3L	24020778	intergenic	not near genes	chr3L_4_24015001	chr3L_24015001	RAL-705
1232	chr3L	24168788	24168820	chr3L	24176114	24176148	ZAM	11	7327	3.5	3.5	3.5	2.4	7360	chr3L	24168788	intron	Snap25 +	chr3L	24172468	intron	Snap25 +	chr3L	24176148	intron	Snap25 +	chr3L_11_24170001	chr3L_24170001	RAL-705
1233	chr3L	24206084	24206110	chr3L	24206398	24206423	flea	5	313	1.0	5.0	3.0	1.2	339	chr3L	24206084	intron	Snap25 +	chr3L	24206254	intron	Snap25 +	chr3L	24206423	intron	Snap25 +	chr3L_5_24205001	chr3L_24205001	RAL-705
1234	chr3L	24791899	24791921	chr3L	24796678	24796700	Doc	7	4779	2.0	2.0	2.0	2.3	4801	chr3L	24791899	intergenic	not near genes	chr3L	24794300	intergenic	not near genes	chr3L	24796700	intergenic	not near genes	chr3L_7_24790001	chr3L_24790001	RAL-705
1240	chr3L	25628504	25628528	chr3L	25633275	25633299	F-element	7	4771	1.5	3.5	2.5	2.0	4795	chr3L	25628504	intron	CG41343 -	chr3L	25630902	intron	CG41343 -	chr3L	25633299	intron	CG41343 -	chr3L_7_25630001	chr3L_25630001	RAL-705
1244	chr3L	22908066	22908066	chr3L	26014451	26014453	Porto1	5	3106386	13.5	5.0	9.2	0.5	3106387	chr3L	22908066	intergenic	not near genes	chr3L	24461260	intergenic	not near genes	chr3L	26014453	intergenic	CG40178 -	chr3L_5_24460001	chr3L_24460001	RAL-705
1245	chr3L	23535677	23535682	chr3L	26026748	26026749	Max-element	4	2491068	10.0	14.5	12.2	0.3	2491072	chr3L	23535677	intergenic	not near genes	chr3L	24781213	intergenic	not near genes	chr3L	26026749	intergenic	not near genes	chr3L_4_24780001	chr3L_24780001	RAL-705
1248	chr3L	22908066	22908067	chr3L	27698695	27698695	micropia	5	4790628	13.5	2.5	8.0	0.6	4790629	chr3L	22908066	intergenic	not near genes	chr3L	25303380	intron	CG40467 -	chr3L	27698695	intergenic	not near genes	chr3L_5_25300001	chr3L_25300001	RAL-705
1249	chr3L	27980696	27980730	chr3L	27985494	27985528	Doc	9	4798	0.0	1.0	0.5	6.0	4832	chr3L	27980696	intron	CG17514 -	chr3L	27983112	intron	CG17514 -	chr3L	27985528	intron	CG17514 -	chr3L_9_27980001	chr3L_27980001	RAL-705
1253	chr3R	4206077	4206103	chr3R	4211652	4211678	mdg3	6	5575	2.0	3.5	2.8	1.6	5601	chr3R	4206077	intron	CG14636 -	chr3R	4208878	intron	CG14636 -	chr3R	4211678	intron	CG14636 -	chr3R_6_4205001	chr3R_4205001	RAL-705
1254	chr3R	4366760	4366781	chr3R	4375143	4375164	roo	6	8383	3.0	4.0	3.5	1.3	8404	chr3R	4366760	3` UTR	CG1090 +	chr3R	4370962	intergenic	not near genes	chr3R	4375164	5` UTR	CR44922 +	chr3R_6_4370001	chr3R_4370001	RAL-705
1257	chr3R	4609545	4609582	chr3R	4610709	4610744	1360	9	1163	2.5	2.5	2.5	2.6	1199	chr3R	4609545	intergenic	not near genes	chr3R	4610144	intergenic	not near genes	chr3R	4610744	intergenic	not near genes	chr3R_9_4610001	chr3R_4610001	RAL-705
1260	chr3R	4683185	4683209	chr3R	4684943	4684968	S-element	6	1759	2.5	1.5	2.0	2.0	1783	chr3R	4683185	intron	CG43427 +	chr3R	4684076	intron	CG43427 +	chr3R	4684968	intron	CG43427 +	chr3R_6_4680001	chr3R_4680001	RAL-705
1261	chr3R	4753242	4753268	chr3R	4757545	4757571	F-element	7	4303	2.5	5.0	3.8	1.5	4329	chr3R	4753242	intron,intron	atms +,CG44098 -	chr3R	4755406	intron,intron	atms +,CG44098 -	chr3R	4757571	intron,exon	atms +,CG44098 -	chr3R_7_4755001	chr3R_4755001	RAL-705
1262	chr3R	4759723	4759754	chr3R	4761219	4761251	hopper2	9	1497	1.5	5.0	3.2	2.1	1528	chr3R	4759723	intron,intron	atms +,CG44098 -	chr3R	4760487	intron,intron	atms +,CG44098 -	chr3R	4761251	intron,intron	atms +,CG44098 -	chr3R_9_4760001	chr3R_4760001	RAL-705
1266	chr3R	5045844	5045859	chr3R	5052946	5052961	HMS-Beagle	7	7102	6.0	1.0	3.5	1.6	7117	chr3R	5045844	intron	CR43635 -	chr3R	5049402	intergenic	not near genes	chr3R	5052961	intergenic	CR45588 -	chr3R_7_5045001	chr3R_5045001	RAL-705
1267	chr3R	5067982	5068012	chr3R	5073499	5073529	mdg3	6	5517	3.0	4.0	3.5	1.3	5547	chr3R	5067982	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073529	intergenic	not near genes	chr3R_6_5070001	chr3R_5070001	RAL-705
1272	chr3R	5338396	5338429	chr3R	5343573	5343606	Rt1c	21	5177	6.5	4.0	5.2	3.4	5210	chr3R	5338396	intron	mtd -	chr3R	5341001	intron	mtd -	chr3R	5343606	intron	mtd -	chr3R_21_5340001	chr3R_5340001	RAL-705
1276	chr3R	5445967	5445992	chr3R	5452427	5452452	Burdock	10	6460	2.0	3.5	2.8	2.6	6485	chr3R	5445967	intron	CG14669 +	chr3R	5449210	intron	CG14669 +	chr3R	5452452	intron	CG14669 +	chr3R_10_5445001	chr3R_5445001	RAL-705
1278	chr3R	5746013	5746039	chr3R	5746254	5746280	pogo	6	241	3.0	3.0	3.0	1.5	267	chr3R	5746013	3` UTR	Madm +	chr3R	5746146	3` UTR	Madm +	chr3R	5746280	3` UTR	Madm +	chr3R_6_5745001	chr3R_5745001	RAL-705
1279	chr3R	5747011	5747032	chr3R	5753202	5753223	diver	4	6191	1.5	1.0	1.2	1.8	6212	chr3R	5747011	intergenic	Madm +	chr3R	5750117	intergenic	not near genes	chr3R	5753223	intergenic	CG2091 -	chr3R_4_5750001	chr3R_5750001	RAL-705
1281	chr3R	5809114	5809135	chr3R	5809355	5809376	pogo	7	241	4.0	5.0	4.5	1.3	262	chr3R	5809114	3` UTR	CG11000 +	chr3R	5809245	3` UTR	CG11000 +	chr3R	5809376	3` UTR	CG11000 +	chr3R_7_5805001	chr3R_5805001	RAL-705
1282	chr3R	5822389	5822412	chr3R	5823555	5823579	1360	7	1166	1.5	3.5	2.5	2.0	1190	chr3R	5822389	3` UTR	CG2023 -	chr3R	5822984	3` UTR	CG2023 -	chr3R	5823579	3` UTR	CG2023 -	chr3R_7_5820001	chr3R_5820001	RAL-705
1284	chr3R	5927559	5927586	chr3R	5927799	5927826	pogo	8	240	0.5	2.5	1.5	3.2	267	chr3R	5927559	intron	CG34113 -	chr3R	5927692	intron	CG34113 -	chr3R	5927826	intron	CG34113 -	chr3R_8_5925001	chr3R_5925001	RAL-705
1287	chr3R	6015970	6015993	chr3R	6024470	6024494	Tirant	4	8501	1.0	0.5	0.8	2.2	8524	chr3R	6015970	intergenic	not near genes	chr3R	6020232	intergenic	not near genes	chr3R	6024494	intergenic	not near genes	chr3R_4_6020001	chr3R_6020001	RAL-705
1290	chr3R	6158521	6158539	chr3R	6167104	6167122	Tirant	8	8582	3.5	3.5	3.5	1.8	8601	chr3R	6158521	intergenic	not near genes	chr3R	6162822	intergenic	not near genes	chr3R	6167122	intergenic	CG1077 +	chr3R_8_6160001	chr3R_6160001	RAL-705
1291	chr3R	6175171	6175195	chr3R	6182443	6182467	HMS-Beagle2	8	7271	0.0	0.0	0.0	8.0	7296	chr3R	6175171	intergenic	Osi1 +	chr3R	6178819	intron	CR45194 +	chr3R	6182467	intergenic	CR45194 +	chr3R_8_6175001	chr3R_6175001	RAL-705
1293	chr3R	6510025	6510039	chr3R	6515105	6515120	jockey	7	5081	2.5	1.5	2.0	2.3	5095	chr3R	6510025	intergenic	not near genes	chr3R	6512572	intergenic	not near genes	chr3R	6515120	intergenic	not near genes	chr3R_7_6510001	chr3R_6510001	RAL-705
1296	chr3R	6737509	6737531	chr3R	6739295	6739318	Doc	6	1786	3.0	2.5	2.8	1.6	1809	chr3R	6737509	intron	pb -	chr3R	6738414	intron	pb -	chr3R	6739318	intron	pb -	chr3R_6_6735001	chr3R_6735001	RAL-705
1315	chr3R	7694576	7694598	chr3R	7713637	7713659	invader3	5	19061	4.0	1.5	2.8	1.3	19083	chr3R	7694576	3` UTR	Nlg1 +	chr3R	7704118	intergenic	not near genes	chr3R	7713659	intergenic	not near genes	chr3R_5_7700001	chr3R_7700001	RAL-705
1316	chr3R	7729466	7729496	chr3R	7737404	7737434	Stalker2	8	7938	4.0	3.5	3.8	1.7	7968	chr3R	7729466	intergenic	not near genes	chr3R	7733450	intergenic	not near genes	chr3R	7737434	intergenic	not near genes	chr3R_8_7730001	chr3R_7730001	RAL-705
1324	chr3R	8094406	8094433	chr3R	8099711	8099738	Transpac	6	5305	3.5	1.0	2.2	1.9	5332	chr3R	8094406	intron	CG7900 +	chr3R	8097072	intron	CG7900 +	chr3R	8099738	intron	CG7900 +	chr3R_6_8095001	chr3R_8095001	RAL-705
1327	chr3R	8207559	8207588	chr3R	8208404	8208433	F-element	6	845	1.5	3.0	2.2	1.9	874	chr3R	8207559	intergenic	not near genes	chr3R	8207996	intergenic	not near genes	chr3R	8208433	intergenic	not near genes	chr3R_6_8205001	chr3R_8205001	RAL-705
1330	chr3R	8403005	8403036	chr3R	8412171	8412201	roo	14	9166	4.0	4.0	4.0	2.8	9196	chr3R	8403005	intron	CG45263 -	chr3R	8407603	intron	CG45263 -	chr3R	8412201	intron	CG45263 -	chr3R_14_8405001	chr3R_8405001	RAL-705
1335	chr3R	8570477	8570496	chr3R	8575113	8575132	HMS-Beagle	4	4636	4.5	3.0	3.8	0.8	4655	chr3R	8570477	intergenic	not near genes	chr3R	8572804	intergenic	not near genes	chr3R	8575132	intergenic	not near genes	chr3R_4_8570001	chr3R_8570001	RAL-705
1337	chr3R	8601766	8601790	chr3R	8610919	8610943	roo	4	9153	5.0	5.0	5.0	0.7	9177	chr3R	8601766	intron	5-HT2B +	chr3R	8606354	intron	5-HT2B +	chr3R	8610943	intron	5-HT2B +	chr3R_4_8605001	chr3R_8605001	RAL-705
1342	chr3R	8707354	8707382	chr3R	8709795	8709822	jockey	6	2440	2.5	2.0	2.2	1.9	2468	chr3R	8707354	intergenic	not near genes	chr3R	8708588	intergenic	not near genes	chr3R	8709822	intergenic	not near genes	chr3R_6_8705001	chr3R_8705001	RAL-705
1344	chr3R	8894872	8894905	chr3R	8896028	8896061	1360	9	1156	4.0	1.0	2.5	2.6	1189	chr3R	8894872	intron	pyd -	chr3R	8895466	intron	pyd -	chr3R	8896061	intron	pyd -	chr3R_9_8895001	chr3R_8895001	RAL-705
1351	chr3R	9319575	9319604	chr3R	9320008	9320036	jockey	7	434	4.5	3.0	3.8	1.5	461	chr3R	9319575	intron	CG8861 -	chr3R	9319806	intron	CG8861 -	chr3R	9320036	intron	CG8861 -	chr3R_7_9315001	chr3R_9315001	RAL-705
1352	chr3R	9361824	9361844	chr3R	9362065	9362085	pogo	6	241	1.5	2.5	2.0	2.0	261	chr3R	9361824	3` UTR	CG45050 +	chr3R	9361954	3` UTR	CG45050 +	chr3R	9362085	3` UTR	CG45050 +	chr3R_6_9360001	chr3R_9360001	RAL-705
1358	chr3R	10231803	10231815	chr3R	10237380	10237392	mdg3	4	5577	0.0	4.5	2.2	1.2	5589	chr3R	10231803	intron	CG42795 +	chr3R	10234598	intron	CG42795 +	chr3R	10237392	intron	CG42795 +	chr3R_4_10230001	chr3R_10230001	RAL-705
1362	chr3R	10804170	10804199	chr3R	10811702	10811731	17.6	12	7531	3.5	1.5	2.5	3.4	7561	chr3R	10804170	intergenic	CG14692 -	chr3R	10807950	intergenic	not near genes	chr3R	10811731	3` UTR	CG14693 -	chr3R_12_10805001	chr3R_10805001	RAL-705
1372	chr3R	11379235	11379263	chr3R	11388390	11388418	roo	11	9155	1.5	2.0	1.8	3.9	9183	chr3R	11379235	intron	pros +	chr3R	11383826	intron	pros +	chr3R	11388418	intron	pros +	chr3R_11_11380001	chr3R_11380001	RAL-705
1377	chr3R	11841061	11841094	chr3R	11846252	11846285	BS	11	5190	3.0	1.0	2.0	3.7	5224	chr3R	11841061	intron	CG6959 -	chr3R	11843673	intron	CG6959 -	chr3R	11846285	intron	CG6959 -	chr3R_11_11840001	chr3R_11840001	RAL-705
1380	chr3R	12022885	12022915	chr3R	12025062	12025092	pogo	9	2177	1.5	4.0	2.8	2.4	2207	chr3R	12022885	intergenic	not near genes	chr3R	12023988	intergenic	not near genes	chr3R	12025092	intergenic	not near genes	chr3R_9_12020001	chr3R_12020001	RAL-705
1402	chr3R	13143044	13143055	chr3R	13148619	13148631	mdg3	4	5575	2.0	2.0	2.0	1.3	5587	chr3R	13143044	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145838	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148631	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_4_13145001	chr3R_13145001	RAL-705
1414	chr3R	14021648	14021663	chr3R	14023465	14023480	S-element	4	1817	4.0	1.5	2.8	1.1	1832	chr3R	14021648	intron	rdx -	chr3R	14022564	intron	rdx -	chr3R	14023480	intron	rdx -	chr3R_4_14020001	chr3R_14020001	RAL-705
1416	chr3R	14180811	14180835	chr3R	14185576	14185600	F-element	5	4765	1.0	0.0	0.5	3.3	4789	chr3R	14180811	intron	Dop1R1 -	chr3R	14183206	intron	Dop1R1 -	chr3R	14185600	intron	Dop1R1 -	chr3R_5_14180001	chr3R_14180001	RAL-705
1417	chr3R	14194426	14194459	chr3R	14203575	14203608	roo	7	9149	3.0	3.0	3.0	1.8	9182	chr3R	14194426	intron	Dop1R1 -	chr3R	14199017	intron	Dop1R1 -	chr3R	14203608	intron	Dop1R1 -	chr3R_7_14195001	chr3R_14195001	RAL-705
1418	chr3R	14246399	14246413	chr3R	14247892	14247909	jockey	5	1495	3.0	1.5	2.2	1.6	1510	chr3R	14246399	intergenic	not near genes	chr3R	14247154	intergenic	not near genes	chr3R	14247909	intergenic	not near genes	chr3R_5_14245001	chr3R_14245001	RAL-705
1431	chr3R	15041434	15041457	chr3R	15045202	15045225	Doc	6	3768	1.0	3.5	2.2	1.9	3791	chr3R	15041434	intergenic	not near genes	chr3R	15043330	intergenic	not near genes	chr3R	15045225	intergenic	not near genes	chr3R_6_15040001	chr3R_15040001	RAL-705
1434	chr3R	15079807	15079832	chr3R	15080047	15080073	pogo	10	241	2.0	0.5	1.2	4.5	266	chr3R	15079807	3` UTR	CG6966 -	chr3R	15079940	3` UTR	CG6966 -	chr3R	15080073	3` UTR	CG6966 -	chr3R_10_15075001	chr3R_15075001	RAL-705
1435	chr3R	15102514	15102531	chr3R	15109769	15109786	412	7	7255	2.5	3.5	3.0	1.8	7272	chr3R	15102514	intron	CG42788 -	chr3R	15106150	intron	CG42788 -	chr3R	15109786	intron	CG42788 -	chr3R_7_15105001	chr3R_15105001	RAL-705
1437	chr3R	15162540	15162559	chr3R	15167308	15167327	F-element	6	4767	3.5	0.0	1.8	2.1	4787	chr3R	15162540	intron	Gyc88E +	chr3R	15164934	intron	Gyc88E +	chr3R	15167327	intron	Gyc88E +	chr3R_6_15160001	chr3R_15160001	RAL-705
1440	chr3R	15618734	15618762	chr3R	15626208	15626234	blood	7	7473	3.5	3.0	3.2	1.7	7500	chr3R	15618734	intergenic	not near genes	chr3R	15622484	intergenic	not near genes	chr3R	15626234	intergenic	not near genes	chr3R_7_15620001	chr3R_15620001	RAL-705
1452	chr3R	16756328	16756347	chr3R	16762519	16762538	diver	7	6191	2.5	1.5	2.0	2.3	6210	chr3R	16756328	intron	bxd -	chr3R	16759433	intron	bxd -	chr3R	16762538	intron	bxd -	chr3R_7_16755001	chr3R_16755001	RAL-705
1460	chr3R	17294671	17294699	chr3R	17295099	17295127	BS	7	428	3.5	2.5	3.0	1.8	456	chr3R	17294671	intergenic	not near genes	chr3R	17294899	intergenic	not near genes	chr3R	17295127	intergenic	not near genes	chr3R_7_17290001	chr3R_17290001	RAL-705
1464	chr3R	17591287	17591320	chr3R	17591723	17591754	F-element	4	435	2.0	0.5	1.2	1.8	467	chr3R	17591287	intergenic	not near genes	chr3R	17591520	intergenic	not near genes	chr3R	17591754	intergenic	not near genes	chr3R_4_17590001	chr3R_17590001	RAL-705
1469	chr3R	17925850	17925889	chr3R	17927317	17927356	hobo	7	1467	3.5	5.5	4.5	1.3	1506	chr3R	17925850	intron	cpo +	chr3R	17926603	intron	cpo +	chr3R	17927356	intron	cpo +	chr3R_7_17925001	chr3R_17925001	RAL-705
1476	chr3R	18606503	18606530	chr3R	18610735	18610762	F-element	6	4232	2.5	1.5	2.0	2.0	4259	chr3R	18606503	intron,intron	qin +,CG14304 -	chr3R	18608632	intron,intron	qin +,CG14304 -	chr3R	18610762	intron,intron	qin +,CG14304 -	chr3R_6_18605001	chr3R_18605001	RAL-705
1484	chr3R	19136406	19136423	chr3R	19139792	19139809	Bari1	5	3386	37.0	16.5	26.8	0.2	3403	chr3R	19136406	exon	Cyp12a4 +	chr3R	19138108	intergenic	not near genes	chr3R	19139809	3` UTR	Ppcs -	chr3R_5_19135001	chr3R_19135001	RAL-705
1502	chr3R	20109535	20109565	chr3R	20114741	20114771	copia	5	5206	3.0	2.5	2.8	1.3	5236	chr3R	20109535	intergenic	not near genes	chr3R	20112153	intergenic	not near genes	chr3R	20114771	intergenic	CG10887 +	chr3R_5_20110001	chr3R_20110001	RAL-705
1504	chr3R	20156688	20156720	chr3R	20165858	20165889	roo	6	9169	2.5	5.0	3.8	1.2	9201	chr3R	20156688	intergenic	not near genes	chr3R	20161288	intergenic	not near genes	chr3R	20165889	intergenic	not near genes	chr3R_6_20160001	chr3R_20160001	RAL-705
1509	chr3R	20266516	20266543	chr3R	20272986	20273014	Burdock	11	6471	2.5	2.0	2.2	3.4	6498	chr3R	20266516	intron	cic +	chr3R	20269765	intron	cic +	chr3R	20273014	intron	cic +	chr3R_11_20265001	chr3R_20265001	RAL-705
1513	chr3R	20330997	20331030	chr3R	20331483	20331516	roo	10	486	0.5	3.0	1.8	3.6	519	chr3R	20330997	intergenic	Sirt2 +	chr3R	20331256	intergenic	Sirt2 +	chr3R	20331516	intergenic	not near genes	chr3R_10_20330001	chr3R_20330001	RAL-705
1530	chr3R	21141675	21141700	chr3R	21150154	21150181	Tirant	9	8480	3.0	1.5	2.2	2.8	8506	chr3R	21141675	intron	SNF4Agamma +	chr3R	21145928	intron	SNF4Agamma +	chr3R	21150181	intron	SNF4Agamma +	chr3R_9_21145001	chr3R_21145001	RAL-705
1542	chr3R	21609003	21609040	chr3R	21611637	21611673	NOF	9	2633	2.0	3.5	2.8	2.4	2670	chr3R	21609003	intron	InR -	chr3R	21610338	intron	InR -	chr3R	21611673	intron	InR -	chr3R_9_21610001	chr3R_21610001	RAL-705
1543	chr3R	21761121	21761154	chr3R	21768512	21768545	mdg1	11	7390	1.5	2.0	1.8	3.9	7424	chr3R	21761121	exon	CG42335 +	chr3R	21764833	intron	CG42335 +	chr3R	21768545	exon	CG42335 +	chr3R_11_21760001	chr3R_21760001	RAL-705
1555	chr3R	22234690	22234715	chr3R	22236009	22236034	pogo	9	1319	2.0	0.5	1.2	4.1	1344	chr3R	22234690	intron	SKIP +	chr3R	22235362	intron	SKIP +	chr3R	22236034	intron	SKIP +	chr3R_9_22235001	chr3R_22235001	RAL-705
1556	chr3R	22239493	22239501	chr3R	22248552	22248561	roo	5	9060	7.0	0.0	3.5	1.1	9068	chr3R	22239493	intron	SKIP +	chr3R	22244027	intron	SKIP +	chr3R	22248561	intron	SKIP +	chr3R_5_22240001	chr3R_22240001	RAL-705
1559	chr3R	22450541	22450556	chr3R	22453181	22453188	NOF	6	2639	4.0	2.0	3.0	1.5	2647	chr3R	22450541	intron	CG34376 +	chr3R	22451864	intron	CG34376 +	chr3R	22453188	intron	CG34376 +	chr3R_6_22450001	chr3R_22450001	RAL-705
1562	chr3R	22881191	22881214	chr3R	22884897	22884920	Doc	4	3706	1.0	1.0	1.0	2.0	3729	chr3R	22881191	intergenic	not near genes	chr3R	22883056	intergenic	not near genes	chr3R	22884920	intergenic	not near genes	chr3R_4_22880001	chr3R_22880001	RAL-705
1570	chr3R	23558401	23558422	chr3R	23560182	23560203	Bari1	6	1781	1.5	3.5	2.5	1.7	1802	chr3R	23558401	intron	beat-IV +	chr3R	23559302	intron	beat-IV +	chr3R	23560203	intron	beat-IV +	chr3R_6_23555001	chr3R_23555001	RAL-705
1573	chr3R	23684715	23684724	chr3R	23685197	23685208	roo	4	484	1.5	4.0	2.8	1.1	493	chr3R	23684715	intron	CG18754 +	chr3R	23684962	intron	CG18754 +	chr3R	23685208	exon	CG18754 +	chr3R_4_23680001	chr3R_23680001	RAL-705
1579	chr3R	24076914	24076944	chr3R	24078381	24078411	hobo	9	1467	3.0	3.5	3.2	2.1	1497	chr3R	24076914	intron	4EHP -	chr3R	24077662	intron	4EHP -	chr3R	24078411	intron	4EHP -	chr3R_9_24075001	chr3R_24075001	RAL-705
1582	chr3R	24207218	24207246	chr3R	24212294	24212322	flea	5	5075	1.0	2.0	1.5	2.0	5104	chr3R	24207218	intron	twin -	chr3R	24209770	intron	twin -	chr3R	24212322	intron	twin -	chr3R_5_24205001	chr3R_24205001	RAL-705
1586	chr3R	24493301	24493310	chr3R	24493529	24493538	BS	6	228	0.5	6.0	3.2	1.4	237	chr3R	24493301	intergenic	not near genes	chr3R	24493420	intergenic	not near genes	chr3R	24493538	intergenic	not near genes	chr3R_6_24490001	chr3R_24490001	RAL-705
1590	chr3R	24730092	24730118	chr3R	24732470	24732496	Doc	8	2378	3.0	1.0	2.0	2.7	2404	chr3R	24730092	intron	tok +	chr3R	24731294	intron	tok +	chr3R	24732496	intron	tok +	chr3R_8_24730001	chr3R_24730001	RAL-705
1593	chr3R	24927126	24927151	chr3R	24931917	24931942	Doc	11	4791	5.5	2.0	3.8	2.3	4816	chr3R	24927126	intergenic	Trf4-2 +	chr3R	24929534	intergenic	not near genes	chr3R	24931942	intergenic	CG11771 +	chr3R_11_24925001	chr3R_24925001	RAL-705
1603	chr3R	25725837	25725861	chr3R	25734997	25735021	roo	8	9160	3.0	2.5	2.8	2.1	9184	chr3R	25725837	intron	LpR2 -	chr3R	25730429	intron	LpR2 -	chr3R	25735021	intron	LpR2 -	chr3R_8_25730001	chr3R_25730001	RAL-705
1608	chr3R	25832692	25832723	chr3R	25841871	25841905	roo	9	9181	2.0	3.5	2.8	2.4	9213	chr3R	25832692	exon	alpha4GT2 +	chr3R	25837298	intron	alpha4GT2 +	chr3R	25841905	exon	alpha4GT2 +	chr3R_9_25835001	chr3R_25835001	RAL-705
1616	chr3R	26376324	26376356	chr3R	26385482	26385516	roo	13	9160	3.5	0.5	2.0	4.3	9192	chr3R	26376324	intergenic	not near genes	chr3R	26380920	intergenic	not near genes	chr3R	26385516	intergenic	not near genes	chr3R_13_26380001	chr3R_26380001	RAL-705
1617	chr3R	26510502	26510535	chr3R	26519563	26519596	roo	6	9061	1.0	4.0	2.5	1.7	9094	chr3R	26510502	intron	plum -	chr3R	26515049	intron	plum -	chr3R	26519596	intron,5` UTR	plum -,CR45226 +	chr3R_6_26515001	chr3R_26515001	RAL-705
1622	chr3R	26642732	26642757	chr3R	26643125	26643151	jockey	4	394	4.5	2.5	3.5	0.9	419	chr3R	26642732	intergenic	not near genes	chr3R	26642942	intergenic	not near genes	chr3R	26643151	intergenic	not near genes	chr3R_4_26640001	chr3R_26640001	RAL-705
1632	chr3R	27140515	27140548	chr3R	27148125	27148158	412	12	7610	3.5	3.5	3.5	2.7	7643	chr3R	27140515	intron	CG6051 -	chr3R	27144336	intron	CG6051 -	chr3R	27148158	intron	CG6051 -	chr3R_12_27140001	chr3R_27140001	RAL-705
1635	chr3R	27342792	27342824	chr3R	27351373	27351405	Tirant	9	8581	2.0	2.0	2.0	3.0	8613	chr3R	27342792	intron	CG42534 +	chr3R	27347098	intron	CG42534 +	chr3R	27351405	intron	CG42534 +	chr3R_9_27345001	chr3R_27345001	RAL-705
1639	chr3R	27521159	27521180	chr3R	27530368	27530389	roo	7	9209	1.0	2.0	1.5	2.8	9230	chr3R	27521159	intron	CG12885 +	chr3R	27525774	intron	CG12885 +	chr3R	27530389	intron	CG12885 +	chr3R_7_27525001	chr3R_27525001	RAL-705
1646	chr3R	27856759	27856786	chr3R	27858242	27858269	hopper2	10	1483	2.0	3.0	2.5	2.9	1510	chr3R	27856759	intron	CG34353 -	chr3R	27857514	intron	CG34353 -	chr3R	27858269	intron	CG34353 -	chr3R_10_27855001	chr3R_27855001	RAL-705
1647	chr3R	27875709	27875730	chr3R	27882764	27882785	297	9	7055	2.0	4.5	3.2	2.1	7076	chr3R	27875709	intron	CG34353 -	chr3R	27879247	intron	CG34353 -	chr3R	27882785	intron	CG34353 -	chr3R_9_27875001	chr3R_27875001	RAL-705
1649	chr3R	28068493	28068525	chr3R	28073935	28073967	I-element	4	5442	0.5	2.0	1.2	1.8	5474	chr3R	28068493	intron	CG34362 +	chr3R	28071230	intron	CG34362 +	chr3R	28073967	intron	CG34362 +	chr3R_4_28070001	chr3R_28070001	RAL-705
1651	chr3R	28173683	28173700	chr3R	28181113	28181130	mdg1	6	7430	2.0	2.5	2.2	1.9	7447	chr3R	28173683	intron	CG34354 +	chr3R	28177406	intron	CG34354 +	chr3R	28181130	intron	CG34354 +	chr3R_6_28175001	chr3R_28175001	RAL-705
1654	chr3R	28253350	28253365	chr3R	28255853	28255875	jockey	8	2509	1.5	1.0	1.2	3.6	2525	chr3R	28253350	intergenic	not near genes	chr3R	28254612	intergenic	not near genes	chr3R	28255875	intergenic	not near genes	chr3R_8_28250001	chr3R_28250001	RAL-705
1655	chr3R	28302106	28302130	chr3R	28302543	28302569	jockey	8	439	2.5	4.5	3.5	1.8	463	chr3R	28302106	intergenic	not near genes	chr3R	28302338	intergenic	not near genes	chr3R	28302569	intergenic	not near genes	chr3R_8_28300001	chr3R_28300001	RAL-705
1664	chr3R	28758286	28758303	chr3R	28763903	28763920	roo	4	5617	2.5	0.0	1.2	1.8	5634	chr3R	28758286	intergenic	aqrs -	chr3R	28761103	intergenic	not near genes	chr3R	28763920	intergenic	not near genes	chr3R_4_28760001	chr3R_28760001	RAL-705
1666	chr3R	28792880	28792900	chr3R	28797975	28797995	jockey	4	5095	1.0	3.5	2.2	1.2	5115	chr3R	28792880	intergenic	not near genes	chr3R	28795438	intergenic	not near genes	chr3R	28797995	intergenic	not near genes	chr3R_4_28795001	chr3R_28795001	RAL-705
1673	chr3R	29079383	29079410	chr3R	29080753	29080782	NOF	6	1372	1.5	4.5	3.0	1.5	1399	chr3R	29079383	intron	CG11873 +	chr3R	29080082	intron	CG11873 +	chr3R	29080782	intron	CG11873 +	chr3R_6_29080001	chr3R_29080001	RAL-705
1678	chr3R	29319822	29319858	chr3R	29320141	29320177	jockey	7	319	1.5	3.0	2.2	2.2	355	chr3R	29319822	intergenic	Cnx99A -	chr3R	29320000	intergenic	Cnx99A -	chr3R	29320177	intergenic	not near genes	chr3R_7_29315001	chr3R_29315001	RAL-705
1679	chr3R	29406620	29406645	chr3R	29407904	29407931	jockey	10	1285	2.0	3.0	2.5	2.9	1311	chr3R	29406620	intron	Ptp99A +	chr3R	29407276	intron	Ptp99A +	chr3R	29407931	intron	Ptp99A +	chr3R_10_29405001	chr3R_29405001	RAL-705
1688	chr3R	29738270	29738298	chr3R	29739736	29739765	hobo	6	1464	2.5	2.5	2.5	1.7	1495	chr3R	29738270	intergenic	CG1969 +,CG7598 +	chr3R	29739018	intron	CG1969 +	chr3R	29739765	5` UTR	CG1969 +	chr3R_6_29735001	chr3R_29735001	RAL-705
1690	chr3R	29882030	29882050	chr3R	29891187	29891207	roo	6	9156	4.5	2.0	3.2	1.4	9177	chr3R	29882030	intron	CG31038 +	chr3R	29886618	intron	CG31038 +	chr3R	29891207	intron	CG31038 +	chr3R_6_29885001	chr3R_29885001	RAL-705
1692	chr3R	30084860	30084881	chr3R	30086326	30086348	hobo	5	1467	3.0	4.0	3.5	1.1	1488	chr3R	30084860	intron	sima +	chr3R	30085604	intron	sima +	chr3R	30086348	intron	sima +	chr3R_5_30085001	chr3R_30085001	RAL-705
1697	chr3R	30238779	30238795	chr3R	30239943	30239959	1360	5	1164	2.0	4.5	3.2	1.2	1180	chr3R	30238779	intergenic	not near genes	chr3R	30239369	intergenic	not near genes	chr3R	30239959	intergenic	not near genes	chr3R_5_30235001	chr3R_30235001	RAL-705
1699	chr3R	30317328	30317349	chr3R	30324920	30324940	roo	5	7592	0.0	1.0	0.5	3.3	7612	chr3R	30317328	intron	hdc +	chr3R	30321134	intron	hdc +	chr3R	30324940	intron	hdc +	chr3R_5_30320001	chr3R_30320001	RAL-705
1702	chr3R	30396222	30396246	chr3R	30404488	30404512	roo	10	8266	2.0	4.5	3.2	2.4	8290	chr3R	30396222	intergenic	not near genes	chr3R	30400367	intergenic	not near genes	chr3R	30404512	5` UTR	CR45570 +	chr3R_10_30400001	chr3R_30400001	RAL-705
1706	chr3R	30480483	30480512	chr3R	30482949	30482980	jockey	10	2468	2.5	3.5	3.0	2.5	2497	chr3R	30480483	intron	PH4alphaEFB +	chr3R	30481732	intron	PH4alphaEFB +	chr3R	30482980	intron	PH4alphaEFB +	chr3R_10_30480001	chr3R_30480001	RAL-705
1708	chr3R	30679529	30679552	chr3R	30686998	30687021	blood	6	7469	2.0	4.5	3.2	1.4	7492	chr3R	30679529	intergenic	not near genes	chr3R	30683275	intergenic	not near genes	chr3R	30687021	intergenic	not near genes	chr3R_6_30680001	chr3R_30680001	RAL-705
1720	chr3R	31279374	31279409	chr3R	31285563	31285600	diver	11	6190	3.0	1.0	2.0	3.7	6226	chr3R	31279374	intergenic	not near genes	chr3R	31282487	intergenic	not near genes	chr3R	31285600	intergenic	not near genes	chr3R_11_31280001	chr3R_31280001	RAL-705
1727	chr3R	31691531	31691559	chr3R	31696297	31696325	Doc	6	4764	4.5	4.5	4.5	1.1	4794	chr3R	31691531	intergenic	not near genes	chr3R	31693928	intergenic	not near genes	chr3R	31696325	intergenic	not near genes	chr3R_6_31690001	chr3R_31690001	RAL-705
1736	chr3R	31997995	31998021	chr3R	32005465	32005491	blood	8	7470	1.0	2.0	1.5	3.2	7496	chr3R	31997995	intron	heph -	chr3R	32001743	intron	heph -	chr3R	32005491	intron	heph -	chr3R_8_32000001	chr3R_32000001	RAL-705
1737	chr4	662192	662206	chr4	662837	662849	INE-1	7	645	1.0	0.5	0.8	3.9	657	chr4	662192	intron	gw -	chr4	662520	intron	gw -	chr4	662849	5` UTR	gw -	chr4_7_660001	chr4_660001	RAL-705
1738	chr4	671608	671634	chr4	680191	680216	Tirant	4	8583	2.0	5.0	3.5	0.9	8608	chr4	671608	intron	CG11360 +	chr4	675912	intron	CG11360 +	chr4	680216	intron	CG11360 +	chr4_4_675001	chr4_675001	RAL-705
1742	chrX	295858	295881	chrX	303478	303501	412	9	7620	0.5	0.5	0.5	6.0	7643	chrX	295858	intron	CG3777 +	chrX	299680	intron	CG3777 +	chrX	303501	intron	CG3777 +	chrX_9_295001	chrX_295001	RAL-705
1743	chrX	428417	428451	chrX	434602	434636	3S18	8	6185	7.0	3.0	5.0	1.3	6219	chrX	428417	intron	CG32816 -	chrX	431526	intron	CG32816 -	chrX	434636	intron	CG32816 -	chrX_8_430001	chrX_430001	RAL-705
1744	chrX	551420	551455	chrX	558982	559017	412	6	7562	4.5	2.5	3.5	1.3	7597	chrX	551420	intron	Appl +	chrX	555218	intron	Appl +	chrX	559017	intron	Appl +	chrX_6_555001	chrX_555001	RAL-705
1752	chrX	827600	827634	chrX	835392	835426	roo	11	7792	2.0	2.5	2.2	3.4	7826	chrX	827600	intron	CG43867 -	chrX	831513	intron	CG43867 -	chrX	835426	intron	CG43867 -	chrX_11_830001	chrX_830001	RAL-705
1754	chrX	906719	906734	chrX	908508	908523	S-element	9	1789	2.0	6.5	4.2	1.7	1804	chrX	906719	intron	CG43867 -	chrX	907621	intron	CG43867 -	chrX	908523	intron	CG43867 -	chrX_9_905001	chrX_905001	RAL-705
1757	chrX	1357782	1357806	chrX	1367952	1367976	Doc	5	10170	5.5	2.0	3.8	1.0	10194	chrX	1357782	intergenic	png -	chrX	1362879	intergenic	not near genes	chrX	1367976	intergenic	not near genes	chrX_5_1360001	chrX_1360001	RAL-705
1758	chrX	1518035	1518069	chrX	1523437	1523471	jockey	11	5401	4.0	1.0	2.5	3.1	5436	chrX	1518035	intergenic	inc +	chrX	1520753	intergenic	not near genes	chrX	1523471	intergenic	not near genes	chrX_11_1520001	chrX_1520001	RAL-705
1759	chrX	1627979	1628002	chrX	1635445	1635470	gtwin	11	7468	4.0	2.5	3.2	2.6	7491	chrX	1627979	intron,intron	Mur2B -,br +	chrX	1631724	intron,intron	Mur2B -,br +	chrX	1635470	intron,intron	Mur2B -,br +	chrX_11_1630001	chrX_1630001	RAL-705
1763	chrX	1930538	1930564	chrX	1938108	1938135	opus	5	7570	2.0	2.5	2.2	1.6	7597	chrX	1930538	intergenic	CG11596 +	chrX	1934336	intergenic	not near genes	chrX	1938135	3` UTR	CG3857 -	chrX_5_1930001	chrX_1930001	RAL-705
1764	chrX	1954889	1954919	chrX	1962829	1962859	Stalker2	8	7939	1.0	2.0	1.5	3.2	7970	chrX	1954889	intron	Hr4 +	chrX	1958874	intron	Hr4 +	chrX	1962859	intron	Hr4 +	chrX_8_1955001	chrX_1955001	RAL-705
1766	chrX	2399835	2399862	chrX	2408188	2408215	roo	7	8352	2.5	0.0	1.2	3.2	8380	chrX	2399835	intergenic	not near genes	chrX	2404025	intergenic	not near genes	chrX	2408215	intergenic	not near genes	chrX_7_2400001	chrX_2400001	RAL-705
1768	chrX	2610385	2610396	chrX	2617502	2617513	HMS-Beagle	4	7117	5.5	1.5	3.5	0.9	7128	chrX	2610385	intergenic	CG8636 -	chrX	2613949	intergenic	not near genes	chrX	2617513	intergenic	Tsp3A -	chrX_4_2610001	chrX_2610001	RAL-705
1769	chrX	2664385	2664420	chrX	2665531	2665564	1360	11	1146	1.5	3.5	2.5	3.1	1179	chrX	2664385	intron	sgg +	chrX	2664974	intron	sgg +	chrX	2665564	intron	sgg +	chrX_11_2660001	chrX_2660001	RAL-705
1771	chrX	2844912	2844926	chrX	2852322	2852336	mdg1	5	7410	1.5	3.5	2.5	1.4	7424	chrX	2844912	intron	kirre +	chrX	2848624	intron	kirre +	chrX	2852336	intron	kirre +	chrX_5_2845001	chrX_2845001	RAL-705
1775	chrX	3058020	3058048	chrX	3058261	3058288	pogo	4	240	0.5	1.0	0.8	2.2	268	chrX	3058020	intron	kirre +	chrX	3058154	intron	kirre +	chrX	3058288	intron	kirre +	chrX_4_3055001	chrX_3055001	RAL-705
1776	chrX	3075636	3075658	chrX	3080942	3080964	Transpac	9	5305	2.5	4.0	3.2	2.1	5328	chrX	3075636	intron	kirre +	chrX	3078300	intron	kirre +	chrX	3080964	intron	kirre +	chrX_9_3075001	chrX_3075001	RAL-705
1781	chrX	3415019	3415050	chrX	3421204	3421235	3S18	10	6185	0.5	1.5	1.0	5.0	6216	chrX	3415019	intron,intron	CR44999 +,CG12535 -	chrX	3418127	intron,intron	CR44999 +,CG12535 -	chrX	3421235	intron,intron	CR44999 +,CG12535 -	chrX_10_3415001	chrX_3415001	RAL-705
1782	chrX	3493089	3493123	chrX	3502248	3502282	roo	7	9159	1.5	1.0	1.2	3.2	9193	chrX	3493089	intron,intron	CR44999 +,Gas8 -	chrX	3497686	intron,intron	CR44999 +,Gas8 -	chrX	3502282	intron,intron	CR44999 +,Gas8 -	chrX_7_3495001	chrX_3495001	RAL-705
1783	chrX	3597549	3597577	chrX	3619717	3619745	roo	12	22168	4.0	3.5	3.8	2.5	22196	chrX	3597549	intron	AstA-R1 +	chrX	3608647	intron	AstA-R1 +	chrX	3619745	intron	AstA-R1 +	chrX_12_3605001	chrX_3605001	RAL-705
1790	chrX	3986863	3986891	chrX	3994496	3994524	412	10	7633	3.0	2.0	2.5	2.9	7661	chrX	3986863	intergenic	not near genes	chrX	3990694	intergenic	not near genes	chrX	3994524	intergenic	not near genes	chrX_10_3990001	chrX_3990001	RAL-705
1792	chrX	4157890	4157918	chrX	4164925	4164953	297	10	7035	3.5	3.0	3.2	2.4	7063	chrX	4157890	intron	Fas2 -	chrX	4161422	intron	Fas2 -	chrX	4164953	intron	Fas2 -	chrX_10_4160001	chrX_4160001	RAL-705
1798	chrX	4700394	4700422	chrX	4700737	4700765	jockey	11	343	1.5	3.5	2.5	3.1	371	chrX	4700394	3` UTR	ctp +	chrX	4700580	3` UTR	ctp +	chrX	4700765	3` UTR	ctp +	chrX_11_4700001	chrX_4700001	RAL-705
1800	chrX	4763255	4763285	chrX	4763743	4763773	Stalker4	7	487	2.0	3.5	2.8	1.8	518	chrX	4763255	intergenic	not near genes	chrX	4763514	intergenic	not near genes	chrX	4763773	intergenic	not near genes	chrX_7_4760001	chrX_4760001	RAL-705
1801	chrX	4792381	4792402	chrX	4792814	4792835	jockey	6	433	2.0	3.0	2.5	1.7	454	chrX	4792381	intergenic	not near genes	chrX	4792608	intergenic	not near genes	chrX	4792835	intergenic	not near genes	chrX_6_4790001	chrX_4790001	RAL-705
1802	chrX	4827976	4827995	chrX	4835347	4835363	Stalker4	4	7370	2.5	1.5	2.0	1.3	7387	chrX	4827976	intergenic	not near genes	chrX	4831670	intergenic	not near genes	chrX	4835363	intergenic	not near genes	chrX_4_4830001	chrX_4830001	RAL-705
1806	chrX	4990045	4990065	chrX	4997259	4997279	roo	4	7214	2.0	0.0	1.0	2.0	7234	chrX	4990045	intron	CR44833 -	chrX	4993662	intron	CR44833 -	chrX	4997279	intron	CR44833 -	chrX_4_4990001	chrX_4990001	RAL-705
1807	chrX	5096273	5096301	chrX	5103838	5103866	springer	6	7565	1.5	1.0	1.2	2.7	7593	chrX	5096273	intron,intron	CG15465 +,rg +	chrX	5100070	intron,intron	CG15465 +,rg +	chrX	5103866	intron,intron	CG15465 +,rg +	chrX_6_5100001	chrX_5100001	RAL-705
1813	chrX	5883809	5883837	chrX	5884050	5884078	pogo	6	241	4.0	1.0	2.5	1.7	269	chrX	5883809	intron	CR45668 -	chrX	5883944	intron	CR45668 -	chrX	5884078	intron	CR45668 -	chrX_6_5880001	chrX_5880001	RAL-705
1814	chrX	5884169	5884190	chrX	5884410	5884430	pogo	12	241	3.5	1.5	2.5	3.4	261	chrX	5884169	intron	CR45668 -	chrX	5884300	intron	CR45668 -	chrX	5884430	intron	CR45668 -	chrX_12_5880001	chrX_5880001	RAL-705
1817	chrX	6171585	6171615	chrX	6179018	6179048	Quasimodo	7	7433	1.0	3.5	2.2	2.2	7463	chrX	6171585	intron	Ca-alpha1T -	chrX	6175316	intron	Ca-alpha1T -	chrX	6179048	intron	Ca-alpha1T -	chrX_7_6175001	chrX_6175001	RAL-705
1823	chrX	6392868	6392898	chrX	6397633	6397662	Doc	9	4765	1.5	3.5	2.5	2.6	4794	chrX	6392868	intergenic	not near genes	chrX	6395265	intergenic	not near genes	chrX	6397662	intergenic	not near genes	chrX_9_6395001	chrX_6395001	RAL-705
1824	chrX	6562817	6562850	chrX	6571299	6571348	Tirant	6	8484	2.0	0.0	1.0	3.0	8531	chrX	6562817	intron	CG34417 +	chrX	6567082	intron	CG34417 +	chrX	6571348	intron	CG34417 +	chrX_6_6565001	chrX_6565001	RAL-705
1825	chrX	6605477	6605505	chrX	6608499	6608527	Burdock	8	3022	4.0	2.0	3.0	2.0	3050	chrX	6605477	intron	pigs +	chrX	6607002	intron	pigs +	chrX	6608527	intron	pigs +	chrX_8_6605001	chrX_6605001	RAL-705
1829	chrX	7023608	7023634	chrX	7030998	7031024	Tabor	9	7390	3.5	5.5	4.5	1.6	7416	chrX	7023608	intron	CG12541 -	chrX	7027316	intron	CG12541 -	chrX	7031024	intron	CG12541 -	chrX_9_7025001	chrX_7025001	RAL-705
1830	chrX	7125246	7125278	chrX	7134405	7134437	roo	7	9159	2.0	3.0	2.5	2.0	9191	chrX	7125246	intergenic	not near genes	chrX	7129842	intergenic	not near genes	chrX	7134437	intergenic	not near genes	chrX_7_7125001	chrX_7125001	RAL-705
1833	chrX	7702909	7702919	chrX	7703348	7703358	jockey	6	439	4.0	3.5	3.8	1.2	449	chrX	7702909	intron	CHES-1-like -	chrX	7703134	intron	CHES-1-like -	chrX	7703358	intron	CHES-1-like -	chrX_6_7700001	chrX_7700001	RAL-705
1837	chrX	7845726	7845757	chrX	7847217	7847248	hopper2	4	1491	1.5	2.0	1.8	1.4	1522	chrX	7845726	intergenic	not near genes	chrX	7846487	intergenic	not near genes	chrX	7847248	intergenic	not near genes	chrX_4_7845001	chrX_7845001	RAL-705
1843	chrX	8948759	8948792	chrX	8956269	8956301	roo	8	7510	0.5	3.5	2.0	2.7	7542	chrX	8948759	intron	rdgA +	chrX	8952530	intron	rdgA +	chrX	8956301	intron	rdgA +	chrX_8_8950001	chrX_8950001	RAL-705
1847	chrX	9508135	9508167	chrX	9509653	9509685	jockey	12	1518	1.0	2.0	1.5	4.8	1550	chrX	9508135	intron	CG32700 -	chrX	9508910	intron	CG32700 -	chrX	9509685	intron	CG32700 -	chrX_12_9505001	chrX_9505001	RAL-705
1848	chrX	9575790	9575817	chrX	9576113	9576141	mdg3	16	324	3.5	3.0	3.2	3.8	351	chrX	9575790	intron,exon	CG32699 -,CG42395 -	chrX	9575966	intron,intron	CG32699 -,CG42395 -	chrX	9576141	intron,5` UTR	CG32699 -,CG42395 -	chrX_16_9575001	chrX_9575001	RAL-705
1855	chrX	10138219	10138248	chrX	10145723	10145752	412	5	7504	3.0	2.5	2.8	1.3	7533	chrX	10138219	intron,intron	RhoU +,CR44894 -	chrX	10141986	intron,intron	RhoU +,CR44894 -	chrX	10145752	intron,intron	RhoU +,CR44894 -	chrX_5_10140001	chrX_10140001	RAL-705
1862	chrX	10550855	10550887	chrX	10552320	10552354	hobo	6	1467	1.5	2.0	1.8	2.1	1499	chrX	10550855	intron	spri -	chrX	10551604	intron	spri -	chrX	10552354	intron	spri -	chrX_6_10550001	chrX_10550001	RAL-705
1863	chrX	10686049	10686080	chrX	10691186	10691217	roo	4	5137	2.0	1.5	1.8	1.4	5168	chrX	10686049	intron	X11Lbeta +	chrX	10688633	intron	X11Lbeta +	chrX	10691217	intron	X11Lbeta +	chrX_4_10685001	chrX_10685001	RAL-705
1869	chrX	11184246	11184280	chrX	11189325	11189356	flea	4	5078	0.0	1.5	0.8	2.2	5110	chrX	11184246	intergenic	not near genes	chrX	11186801	intergenic	not near genes	chrX	11189356	intergenic	not near genes	chrX_4_11185001	chrX_11185001	RAL-705
1874	chrX	11312063	11312082	chrX	11319416	11319435	Stalker2	5	7353	2.5	1.5	2.0	1.7	7372	chrX	11312063	intergenic	not near genes	chrX	11315749	intergenic	not near genes	chrX	11319435	intergenic	not near genes	chrX_5_11315001	chrX_11315001	RAL-705
1876	chrX	11633420	11633435	chrX	11640473	11640489	297	4	7054	2.0	1.5	1.8	1.4	7069	chrX	11633420	intron	Ptp10D +	chrX	11636954	intron	Ptp10D +	chrX	11640489	intron	Ptp10D +	chrX_4_11635001	chrX_11635001	RAL-705
1889	chrX	13429462	13429497	chrX	13430609	13430646	jockey	14	1149	3.0	4.0	3.5	3.1	1184	chrX	13429462	intergenic	not near genes	chrX	13430054	intergenic	not near genes	chrX	13430646	intergenic	not near genes	chrX_14_13430001	chrX_13430001	RAL-705
1894	chrX	13937985	13938000	chrX	13941256	13941271	I-element	4	3271	4.5	4.5	4.5	0.7	3286	chrX	13937985	intron	mamo -	chrX	13939628	intron	mamo -	chrX	13941271	intron	mamo -	chrX_4_13935001	chrX_13935001	RAL-705
1897	chrX	14105021	14105054	chrX	14114171	14114205	roo	8	9151	1.0	2.0	1.5	3.2	9184	chrX	14105021	intergenic	not near genes	chrX	14109613	intergenic	not near genes	chrX	14114205	5` UTR	CR44657 +	chrX_8_14105001	chrX_14105001	RAL-705
1912	chrX	14636462	14636476	chrX	14641903	14641917	I-element	10	5441	3.5	2.5	3.0	2.5	5455	chrX	14636462	intron	NetA -	chrX	14639190	intron	NetA -	chrX	14641917	intron	NetA -	chrX_10_14635001	chrX_14635001	RAL-705
1915	chrX	14778026	14778061	chrX	14782823	14782858	Doc	6	4797	2.5	1.5	2.0	2.0	4832	chrX	14778026	intergenic	CG5347 +	chrX	14780442	intergenic	not near genes	chrX	14782858	intergenic	Ag5r2 -	chrX_6_14780001	chrX_14780001	RAL-705
1919	chrX	14936857	14936888	chrX	14946114	14946145	roo	10	9257	1.5	4.5	3.0	2.5	9288	chrX	14936857	intron	pdgy -	chrX	14941501	intron	pdgy -	chrX	14946145	intron	pdgy -	chrX_10_14940001	chrX_14940001	RAL-705
1922	chrX	15413048	15413083	chrX	15417350	15417385	Juan	8	4302	4.0	0.0	2.0	2.7	4337	chrX	15413048	intron	Cngl -	chrX	15415216	intron	Cngl -	chrX	15417385	intron	Cngl -	chrX_8_15415001	chrX_15415001	RAL-705
1923	chrX	15421920	15421952	chrX	15423431	15423463	pogo	8	1511	1.5	2.0	1.8	2.9	1543	chrX	15421920	intron	Cngl -	chrX	15422692	intron	Cngl -	chrX	15423463	intron	Cngl -	chrX_8_15420001	chrX_15420001	RAL-705
1924	chrX	15435698	15435704	chrX	15436130	15436137	rover	5	433	2.5	5.5	4.0	1.0	439	chrX	15435698	intron	Cngl -	chrX	15435918	intron	Cngl -	chrX	15436137	intron	Cngl -	chrX_5_15435001	chrX_15435001	RAL-705
1931	chrX	16492648	16492678	chrX	16498225	16498255	mdg3	8	5577	2.5	2.5	2.5	2.3	5607	chrX	16492648	intron	para -	chrX	16495452	intron	para -	chrX	16498255	intron	para -	chrX_8_16495001	chrX_16495001	RAL-705
1934	chrX	16936007	16936037	chrX	16936424	16936455	jockey	5	418	2.0	2.0	2.0	1.7	448	chrX	16936007	intron	CG4928 +	chrX	16936231	intron	CG4928 +	chrX	16936455	intron	CG4928 +	chrX_5_16935001	chrX_16935001	RAL-705
1940	chrX	17195206	17195231	chrX	17200292	17200317	flea	5	5086	1.5	0.5	1.0	2.5	5111	chrX	17195206	3` UTR	baz +	chrX	17197762	3` UTR	baz +	chrX	17200317	3` UTR	baz +	chrX_5_17195001	chrX_17195001	RAL-705
1947	chrX	17792956	17792977	chrX	17796254	17796275	flea	4	3298	5.0	0.5	2.8	1.1	3319	chrX	17792956	intron	OdsH +	chrX	17794616	intron	OdsH +	chrX	17796275	intron	OdsH +	chrX_4_17790001	chrX_17790001	RAL-705
1951	chrX	18194065	18194091	chrX	18194600	18194626	BS	10	535	4.0	4.5	4.2	1.9	561	chrX	18194065	intron	Frq2 +	chrX	18194346	intron	Frq2 +	chrX	18194626	intron	Frq2 +	chrX_10_18190001	chrX_18190001	RAL-705
1954	chrX	18429497	18429519	chrX	18434807	18434830	Transpac	4	5310	1.0	1.5	1.2	1.8	5333	chrX	18429497	intergenic	not near genes	chrX	18432164	intergenic	not near genes	chrX	18434830	intergenic	not near genes	chrX_4_18430001	chrX_18430001	RAL-705
1956	chrX	18555395	18555412	chrX	18556915	18556933	transib2	5	1521	0.0	4.5	2.2	1.6	1538	chrX	18555395	intron	Bx +	chrX	18556164	intron	Bx +	chrX	18556933	intron	Bx +	chrX_5_18555001	chrX_18555001	RAL-705
1963	chrX	19136554	19136584	chrX	19143474	19143503	412	5	6920	1.5	2.5	2.0	1.7	6949	chrX	19136554	intergenic	not near genes	chrX	19140028	intergenic	not near genes	chrX	19143503	3` UTR	RhoGAP18B -	chrX_5_19140001	chrX_19140001	RAL-705
1966	chrX	19380158	19380182	chrX	19380399	19380423	pogo	6	241	3.5	1.0	2.2	1.9	265	chrX	19380158	intron	kek5 +	chrX	19380290	intron	kek5 +	chrX	19380423	intron	kek5 +	chrX_6_19380001	chrX_19380001	RAL-705
1969	chrX	19472122	19472151	chrX	19472692	19472721	jockey	5	570	1.5	1.5	1.5	2.0	599	chrX	19472122	intergenic	kek5 +	chrX	19472422	intergenic	not near genes	chrX	19472721	intergenic	not near genes	chrX_5_19470001	chrX_19470001	RAL-705
1980	chrX	20377326	20377351	chrX	20378793	20378818	hobo	8	1467	1.5	4.0	2.8	2.1	1492	chrX	20377326	intergenic	not near genes	chrX	20378072	intergenic	not near genes	chrX	20378818	intergenic	not near genes	chrX_8_20375001	chrX_20375001	RAL-705
1987	chrX	20836746	20836754	chrX	20844343	20844356	roo	4	7600	2.0	3.5	2.8	1.1	7610	chrX	20836746	intron	shakB -	chrX	20840551	intron	shakB -	chrX	20844356	intron	shakB -	chrX_4_20840001	chrX_20840001	RAL-705
1988	chrX	20940720	20940751	chrX	20942188	20942220	hobo	12	1469	4.5	4.0	4.2	2.3	1500	chrX	20940720	intergenic	not near genes	chrX	20941470	intergenic	not near genes	chrX	20942220	intergenic	not near genes	chrX_12_20940001	chrX_20940001	RAL-705
1993	chrX	21086132	21086161	chrX	21087161	21087190	jockey	6	1028	1.0	0.5	0.8	3.3	1058	chrX	21086132	intergenic	not near genes	chrX	21086661	intergenic	not near genes	chrX	21087190	intergenic	not near genes	chrX_6_21085001	chrX_21085001	RAL-705
1995	chrX	21254654	21254667	chrX	21255570	21255583	hopper2	6	916	3.5	0.0	1.8	2.1	929	chrX	21254654	intron	CG32521 -	chrX	21255118	intron	CG32521 -	chrX	21255583	intron	CG32521 -	chrX_6_21255001	chrX_21255001	RAL-705
1998	chrX	21458693	21458727	chrX	21464129	21464163	Ivk	9	5436	5.5	0.5	3.0	2.2	5470	chrX	21458693	intergenic	not near genes	chrX	21461428	intergenic	not near genes	chrX	21464163	intergenic	not near genes	chrX_9_21460001	chrX_21460001	RAL-705
2002	chrX	22697499	22697524	chrX	22701794	22701821	Juan	7	4297	3.0	1.0	2.0	2.3	4322	chrX	22697499	intron	CR44997 +	chrX	22699660	intron	CR44997 +	chrX	22701821	intron	CR44997 +	chrX_7_22695001	chrX_22695001	RAL-705
2006	chrX	22996310	22996338	chrX	23003544	23003572	roo	8	7234	2.5	2.5	2.5	2.3	7262	chrX	22996310	intron,intron	stnA -,stnB -	chrX	22999941	intron,intron	stnA -,stnB -	chrX	23003572	intron,intron	stnA -,stnB -	chrX_8_22995001	chrX_22995001	RAL-705
2008	chrY	1419916	1419929	chrY	1420170	1420183	invader2	5	254	3.5	7.0	5.2	0.8	267	chrY	1419916	intergenic	not near genes	chrY	1420050	intergenic	not near genes	chrY	1420183	intergenic	not near genes	chrY_5_1420001	chrY_1420001	RAL-705