SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47459 47490 chr2L 52564 52595 jockey 7 5105 8.0 2.5 5.2 1.1 5136 chr2L 47459 intron Cda5 - chr2L 50027 intron Cda5 - chr2L 52595 intron Cda5 - chr2L_7_50001 chr2L_50001 RAL-705 2 chr2L 263300 263330 chr2L 263446 263476 6 146 1.0 3.5 2.2 1.9 176 chr2L 263300 intron,3` UTR CG3645 -,CG17075 - chr2L 263388 intron,3` UTR CG3645 -,CG17075 - chr2L 263476 intron,3` UTR CG3645 -,CG17075 - chr2L_6_260001 chr2L_260001 RAL-705 3 chr2L 313476 313496 chr2L 313575 313595 9 99 0.0 2.5 1.2 4.1 119 chr2L 313476 intron Plc21C + chr2L 313536 intron Plc21C + chr2L 313595 intron Plc21C + chr2L_9_310001 chr2L_310001 RAL-705 4 chr2L 325134 325154 chr2L 325211 325231 6 77 1.5 1.5 1.5 2.4 97 chr2L 325134 intron Plc21C + chr2L 325182 intron Plc21C + chr2L 325231 intron Plc21C + chr2L_6_325001 chr2L_325001 RAL-705 5 chr2L 347887 347912 chr2L 355387 355410 blood 7 7500 3.0 2.0 2.5 2.0 7523 chr2L 347887 3` UTR Plc21C + chr2L 351648 intron Plc21C + chr2L 355410 3` UTR Plc21C + chr2L_7_350001 chr2L_350001 RAL-705 6 chr2L 458904 458924 chr2L 458981 459000 6 76 2.5 2.5 2.5 1.7 96 chr2L 458904 3` UTR CG4297 - chr2L 458952 3` UTR CG4297 - chr2L 459000 3` UTR CG4297 - chr2L_6_455001 chr2L_455001 RAL-705 7 chr2L 533930 533948 chr2L 534018 534036 9 89 2.0 2.5 2.2 2.8 106 chr2L 533930 intron ush + chr2L 533983 intron ush + chr2L 534036 intron ush + chr2L_9_530001 chr2L_530001 RAL-705 8 chr2L 630307 630323 chr2L 630399 630415 7 91 3.5 0.0 1.8 2.5 108 chr2L 630307 intergenic not near genes chr2L 630361 intergenic not near genes chr2L 630415 intergenic not near genes chr2L_7_630001 chr2L_630001 RAL-705 9 chr2L 666283 666302 chr2L 666359 666378 11 76 2.5 0.0 1.2 5.0 95 chr2L 666283 intron ds - chr2L 666330 intron ds - chr2L 666378 intron ds - chr2L_11_665001 chr2L_665001 RAL-705 10 chr2L 686921 686952 chr2L 695960 695992 roo 5 9039 0.5 3.5 2.0 1.7 9071 chr2L 686921 intron ds - chr2L 691456 intron ds - chr2L 695992 intron ds - chr2L_5_690001 chr2L_690001 RAL-705 11 chr2L 764566 764589 chr2L 764647 764670 5 81 0.5 2.5 1.5 2.0 104 chr2L 764566 intergenic not near genes chr2L 764618 intergenic not near genes chr2L 764670 intergenic not near genes chr2L_5_760001 chr2L_760001 RAL-705 12 chr2L 770473 770494 chr2L 772253 772275 Bari1 7 1780 3.0 4.0 3.5 1.6 1802 chr2L 770473 intergenic not near genes chr2L 771374 intergenic not near genes chr2L 772275 intergenic CR44614 + chr2L_7_770001 chr2L_770001 RAL-705 13 chr2L 877845 877863 chr2L 877926 877944 10 81 3.5 3.0 3.2 2.4 99 chr2L 877845 3` UTR,exon CG15824 -,ninaA + chr2L 877894 3` UTR,intron CG15824 -,ninaA + chr2L 877944 3` UTR,intron CG15824 -,ninaA + chr2L_10_875001 chr2L_875001 RAL-705 14 chr2L 976877 976906 chr2L 984513 984542 roo 5 7636 3.5 0.0 1.8 1.8 7665 chr2L 976877 intergenic not near genes chr2L 980710 intergenic not near genes chr2L 984542 intergenic not near genes chr2L_5_980001 chr2L_980001 RAL-705 15 chr2L 1035559 1035591 chr2L 1035636 1035668 8 77 2.5 3.0 2.8 2.1 109 chr2L 1035559 intron IA-2 - chr2L 1035614 intron IA-2 - chr2L 1035668 intron IA-2 - chr2L_8_1035001 chr2L_1035001 RAL-705 16 chr2L 1042604 1042615 chr2L 1042695 1042706 4 91 0.5 0.0 0.2 3.3 102 chr2L 1042604 intron IA-2 - chr2L 1042655 intron IA-2 - chr2L 1042706 intron IA-2 - chr2L_4_1040001 chr2L_1040001 RAL-705 17 chr2L 1083702 1083719 chr2L 1083778 1083795 6 76 3.5 2.0 2.8 1.6 93 chr2L 1083702 3` UTR,3` UTR Atg4a +,CG4629 - chr2L 1083748 3` UTR,3` UTR Atg4a +,CG4629 - chr2L 1083795 3` UTR,3` UTR Atg4a +,CG4629 - chr2L_6_1080001 chr2L_1080001 RAL-705 18 chr2L 1126671 1126696 chr2L 1126747 1126771 9 76 2.0 1.0 1.5 3.6 100 chr2L 1126671 intron Pino - chr2L 1126721 intron Pino - chr2L 1126771 intron Pino - chr2L_9_1125001 chr2L_1125001 RAL-705 19 chr2L 1218408 1218424 chr2L 1218498 1218514 9 90 2.5 0.0 1.2 4.1 106 chr2L 1218408 intergenic not near genes chr2L 1218461 intergenic not near genes chr2L 1218514 intergenic not near genes chr2L_9_1215001 chr2L_1215001 RAL-705 20 chr2L 1220133 1220162 chr2L 1227599 1227628 blood 12 7466 1.5 0.5 1.0 6.0 7495 chr2L 1220133 intron CG42329 + chr2L 1223880 intron CG42329 + chr2L 1227628 intron CG42329 + chr2L_12_1220001 chr2L_1220001 RAL-705 21 chr2L 1261135 1261252 chr2L 1261217 1261333 10 82 0.5 0.5 0.5 6.7 198 chr2L 1261135 intron robo3 + chr2L 1261234 intron robo3 + chr2L 1261333 intron robo3 + chr2L_10_1260001 chr2L_1260001 RAL-705 22 chr2L 1570705 1570721 chr2L 1573577 1573593 F-element 8 2872 1.5 4.5 3.0 2.0 2888 chr2L 1570705 intron haf + chr2L 1572149 intron haf + chr2L 1573593 intron haf + chr2L_8_1570001 chr2L_1570001 RAL-705 23 chr2L 1590960 1590987 chr2L 1591036 1591063 13 76 5.0 3.0 4.0 2.6 103 chr2L 1590960 intron haf + chr2L 1591012 intron haf + chr2L 1591063 intron haf + chr2L_13_1590001 chr2L_1590001 RAL-705 24 chr2L 1635396 1635413 chr2L 1635532 1635549 6 136 0.0 3.0 1.5 2.4 153 chr2L 1635396 intergenic not near genes chr2L 1635472 intergenic not near genes chr2L 1635549 intergenic not near genes chr2L_6_1635001 chr2L_1635001 RAL-705 25 chr2L 1655344 1655350 chr2L 1655434 1655440 6 90 4.0 1.5 2.8 1.6 96 chr2L 1655344 intron chinmo + chr2L 1655392 intron chinmo + chr2L 1655440 intron chinmo + chr2L_6_1655001 chr2L_1655001 RAL-705 26 chr2L 1678998 1679000 chr2L 1686463 1686465 blood 5 7465 0.0 12.0 6.0 0.7 7467 chr2L 1678998 intron chinmo + chr2L 1682732 intron chinmo + chr2L 1686465 intron chinmo + chr2L_5_1680001 chr2L_1680001 RAL-705 27 chr2L 1711355 1711386 chr2L 1711679 1711710 mdg3 9 323 1.0 3.5 2.2 2.8 355 chr2L 1711355 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711532 3` UTR frtz - chr2L 1711710 3` UTR frtz - chr2L_9_1710001 chr2L_1710001 RAL-705 28 chr2L 1721835 1721852 chr2L 1721919 1721936 5 84 0.0 2.5 1.2 2.3 101 chr2L 1721835 intron Rim2 - chr2L 1721886 intron Rim2 - chr2L 1721936 intron Rim2 - chr2L_5_1720001 chr2L_1720001 RAL-705 29 chr2L 1837819 1837832 chr2L 1838048 1838059 7 229 0.5 7.0 3.8 1.5 240 chr2L 1837819 intron wry + chr2L 1837939 intron wry + chr2L 1838059 intron wry + chr2L_7_1835001 chr2L_1835001 RAL-705 30 chr2L 1842292 1842316 chr2L 1842368 1842392 6 76 0.5 2.5 1.5 2.4 100 chr2L 1842292 intron wry + chr2L 1842342 intron wry + chr2L 1842392 intron wry + chr2L_6_1840001 chr2L_1840001 RAL-705 31 chr2L 1883433 1883443 chr2L 1884013 1884023 5 580 1.0 2.0 1.5 2.0 590 chr2L 1883433 intron CG15358 - chr2L 1883728 intron CG15358 - chr2L 1884023 exon CG15358 - chr2L_5_1880001 chr2L_1880001 RAL-705 32 chr2L 1946737 1946754 chr2L 1946813 1946830 10 76 3.0 0.5 1.8 3.6 93 chr2L 1946737 intergenic CG33673 - chr2L 1946784 intergenic CG33673 - chr2L 1946830 intergenic CG33673 - chr2L_10_1945001 chr2L_1945001 RAL-705 33 chr2L 2049226 2049235 chr2L 2049309 2049319 5 84 0.0 4.0 2.0 1.7 93 chr2L 2049226 intergenic not near genes chr2L 2049272 intergenic not near genes chr2L 2049319 intergenic not near genes chr2L_5_2045001 chr2L_2045001 RAL-705 34 chr2L 2090199 2090219 chr2L 2090275 2090295 6 76 2.0 2.0 2.0 2.0 96 chr2L 2090199 intron dpr3 - chr2L 2090247 intron dpr3 - chr2L 2090295 intron dpr3 - chr2L_6_2090001 chr2L_2090001 RAL-705 35 chr2L 2097284 2097311 chr2L 2097452 2097478 6 167 3.0 1.0 2.0 2.0 194 chr2L 2097284 intron dpr3 - chr2L 2097381 intron dpr3 - chr2L 2097478 intron dpr3 - chr2L_6_2095001 chr2L_2095001 RAL-705 36 chr2L 2100376 2100402 chr2L 2109526 2109553 roo 10 9151 3.0 2.5 2.8 2.6 9177 chr2L 2100376 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109553 intron dpr3 - chr2L_10_2100001 chr2L_2100001 RAL-705 37 chr2L 2112117 2112131 chr2L 2119779 2119793 opus 4 7662 4.5 2.0 3.2 1.0 7676 chr2L 2112117 intergenic not near genes chr2L 2115955 intergenic not near genes chr2L 2119793 intergenic not near genes chr2L_4_2115001 chr2L_2115001 RAL-705 38 chr2L 2129840 2129852 chr2L 2129973 2129985 4 133 20.5 22.5 21.5 0.2 145 chr2L 2129840 intergenic not near genes chr2L 2129912 intergenic not near genes chr2L 2129985 intergenic not near genes chr2L_4_2125001 chr2L_2125001 RAL-705 39 chr2L 2262308 2262336 chr2L 2262385 2262413 6 77 1.0 0.0 0.5 4.0 105 chr2L 2262308 intergenic not near genes chr2L 2262360 intergenic not near genes chr2L 2262413 intergenic not near genes chr2L_6_2260001 chr2L_2260001 RAL-705 40 chr2L 2310809 2310835 chr2L 2311079 2311103 8 269 3.0 2.0 2.5 2.3 294 chr2L 2310809 5` UTR CG9967 - chr2L 2310956 intron CG9967 - chr2L 2311103 intron CG9967 - chr2L_8_2310001 chr2L_2310001 RAL-705 41 chr2L 2372365 2372402 chr2L 2372451 2372482 5 85 0.0 1.5 0.8 2.8 117 chr2L 2372365 intergenic CG3609 - chr2L 2372424 intergenic CG3609 - chr2L 2372482 3` UTR CG3609 - chr2L_5_2370001 chr2L_2370001 RAL-705 42 chr2L 2396067 2396073 chr2L 2396169 2396171 4 100 8.0 1.0 4.5 0.7 104 chr2L 2396067 intron VGlut + chr2L 2396119 intron VGlut + chr2L 2396171 intron VGlut + chr2L_4_2395001 chr2L_2395001 RAL-705 43 chr2L 2427392 2427395 chr2L 2427478 2427481 4 86 4.0 2.0 3.0 1.0 89 chr2L 2427392 3` UTR CR44912 - chr2L 2427436 3` UTR CR44912 - chr2L 2427481 3` UTR CR44912 - chr2L_4_2425001 chr2L_2425001 RAL-705 44 chr2L 2481976 2482008 chr2L 2482056 2482088 8 80 4.0 4.0 4.0 1.6 112 chr2L 2481976 intergenic not near genes chr2L 2482032 intergenic not near genes chr2L 2482088 intergenic not near genes chr2L_8_2480001 chr2L_2480001 RAL-705 45 chr2L 2557201 2557208 chr2L 2557277 2557284 4 76 1.5 2.5 2.0 1.3 83 chr2L 2557201 intergenic not near genes chr2L 2557242 intergenic not near genes chr2L 2557284 intergenic not near genes chr2L_4_2555001 chr2L_2555001 RAL-705 46 chr2L 2587828 2587844 chr2L 2587906 2587923 5 79 1.5 2.5 2.0 1.7 95 chr2L 2587828 intergenic not near genes chr2L 2587876 intergenic not near genes chr2L 2587923 intergenic not near genes chr2L_5_2585001 chr2L_2585001 RAL-705 47 chr2L 2661210 2661234 chr2L 2663045 2663072 I-element 7 1837 0.5 1.0 0.8 3.9 1862 chr2L 2661210 intergenic not near genes chr2L 2662141 intergenic not near genes chr2L 2663072 intergenic not near genes chr2L_7_2660001 chr2L_2660001 RAL-705 48 chr2L 2667623 2667658 chr2L 2667702 2667736 11 79 2.5 3.5 3.0 2.8 113 chr2L 2667623 intergenic not near genes chr2L 2667680 intergenic not near genes chr2L 2667736 intergenic not near genes chr2L_11_2665001 chr2L_2665001 RAL-705 49 chr2L 2713522 2713549 chr2L 2713621 2713647 9 99 2.0 5.0 3.5 2.0 125 chr2L 2713522 intron CG31690 + chr2L 2713584 intron CG31690 + chr2L 2713647 intron CG31690 + chr2L_9_2710001 chr2L_2710001 RAL-705 50 chr2L 2793944 2793975 chr2L 2794024 2794054 7 80 1.0 1.0 1.0 3.5 110 chr2L 2793944 intron Syt1 - chr2L 2793999 intron Syt1 - chr2L 2794054 intron Syt1 - chr2L_7_2790001 chr2L_2790001 RAL-705 51 chr2L 2885381 2885396 chr2L 2885458 2885473 5 76 2.0 3.5 2.8 1.3 92 chr2L 2885381 intron NTPase - chr2L 2885427 intron NTPase - chr2L 2885473 intron NTPase - chr2L_5_2885001 chr2L_2885001 RAL-705 52 chr2L 2894350 2894360 chr2L 2895037 2895046 6 687 3.0 5.0 4.0 1.2 696 chr2L 2894350 intron lilli + chr2L 2894698 intron lilli + chr2L 2895046 intron lilli + chr2L_6_2890001 chr2L_2890001 RAL-705 53 chr2L 2933309 2933326 chr2L 2935486 2935503 pogo 5 2177 2.5 5.0 3.8 1.0 2194 chr2L 2933309 intron lilli + chr2L 2934406 intron lilli + chr2L 2935503 intron lilli + chr2L_5_2930001 chr2L_2930001 RAL-705 54 chr2L 2937418 2937449 chr2L 2937492 2937526 4 77 0.0 2.5 1.2 1.8 108 chr2L 2937418 intron lilli + chr2L 2937472 intron lilli + chr2L 2937526 intron lilli + chr2L_4_2935001 chr2L_2935001 RAL-705 55 chr2L 3026214 3026250 chr2L 3026870 3026906 16 656 26.0 18.5 22.2 0.7 692 chr2L 3026214 3` UTR CG3542 + chr2L 3026560 3` UTR CG3605 - chr2L 3026906 exon CG3605 - chr2L_16_3025001 chr2L_3025001 RAL-705 56 chr2L 3073033 3073060 chr2L 3078236 3078263 copia 9 5203 1.0 1.0 1.0 4.5 5230 chr2L 3073033 intron toc - chr2L 3075648 intron toc - chr2L 3078263 intron toc - chr2L_9_3075001 chr2L_3075001 RAL-705 57 chr2L 3108869 3108893 chr2L 3108946 3108970 11 77 1.0 0.0 0.5 7.3 101 chr2L 3108869 intron toc - chr2L 3108920 intron toc - chr2L 3108970 intron toc - chr2L_11_3105001 chr2L_3105001 RAL-705 58 chr2L 3114440 3114447 chr2L 3114543 3114552 4 104 2.0 5.0 3.5 0.9 112 chr2L 3114440 intron toc - chr2L 3114496 intron toc - chr2L 3114552 intron toc - chr2L_4_3110001 chr2L_3110001 RAL-705 59 chr2L 3192207 3192241 chr2L 3192318 3192351 6 111 2.0 6.0 4.0 1.2 144 chr2L 3192207 exon CG34393 - chr2L 3192279 intron CG34393 - chr2L 3192351 intron CG34393 - chr2L_6_3190001 chr2L_3190001 RAL-705 60 chr2L 3202737 3202771 chr2L 3210166 3210200 mdg1 8 7428 0.0 2.0 1.0 4.0 7463 chr2L 3202737 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210200 intergenic CR45336 + chr2L_8_3205001 chr2L_3205001 RAL-705 61 chr2L 3251494 3251527 chr2L 3259059 3259092 springer 7 7565 2.0 3.0 2.5 2.0 7598 chr2L 3251494 intergenic not near genes chr2L 3255293 intergenic not near genes chr2L 3259092 intergenic not near genes chr2L_7_3255001 chr2L_3255001 RAL-705 62 chr2L 3291241 3291269 chr2L 3291321 3291349 5 80 1.5 5.0 3.2 1.2 108 chr2L 3291241 intergenic CG9664 - chr2L 3291295 3` UTR CG9664 - chr2L 3291349 3` UTR CG9664 - chr2L_5_3290001 chr2L_3290001 RAL-705 63 chr2L 3312079 3312113 chr2L 3312184 3312217 9 105 0.0 1.0 0.5 6.0 138 chr2L 3312079 intron CG3277 + chr2L 3312148 intron CG3277 + chr2L 3312217 intron CG3277 + chr2L_9_3310001 chr2L_3310001 RAL-705 64 chr2L 3323258 3323284 chr2L 3323365 3323391 7 107 0.5 2.0 1.2 3.2 133 chr2L 3323258 intergenic CG8837 + chr2L 3323324 intergenic CG8837 + chr2L 3323391 intergenic CG8837 + chr2L_7_3320001 chr2L_3320001 RAL-705 65 chr2L 3388606 3388628 chr2L 3388847 3388869 pogo 4 241 2.0 1.0 1.5 1.6 263 chr2L 3388606 intergenic CG42460 - chr2L 3388738 intergenic CG42460 - chr2L 3388869 intergenic CG42460 -,CR44791 + chr2L_4_3385001 chr2L_3385001 RAL-705 66 chr2L 3393281 3393314 chr2L 3393379 3393412 6 97 2.0 2.5 2.2 1.9 131 chr2L 3393281 intergenic not near genes chr2L 3393346 intergenic not near genes chr2L 3393412 intergenic not near genes chr2L_6_3390001 chr2L_3390001 RAL-705 67 chr2L 3649792 3649821 chr2L 3654995 3655024 copia 5 5203 2.5 3.0 2.8 1.3 5232 chr2L 3649792 intron for - chr2L 3652408 intron for - chr2L 3655024 intron for - chr2L_5_3650001 chr2L_3650001 RAL-705 68 chr2L 3686028 3686057 chr2L 3686116 3686144 4 88 0.0 0.5 0.2 3.3 116 chr2L 3686028 intron CG34340 + chr2L 3686086 intron CG34340 + chr2L 3686144 intron CG34340 + chr2L_4_3685001 chr2L_3685001 RAL-705 69 chr2L 3850149 3850184 chr2L 3850235 3850270 13 86 3.5 3.0 3.2 3.1 121 chr2L 3850149 intergenic not near genes chr2L 3850210 intergenic not near genes chr2L 3850270 intergenic not near genes chr2L_13_3850001 chr2L_3850001 RAL-705 70 chr2L 3879283 3879302 chr2L 3879500 3879518 4 217 1.5 1.5 1.5 1.6 235 chr2L 3879283 intron capu - chr2L 3879400 intron capu - chr2L 3879518 intron capu - chr2L_4_3875001 chr2L_3875001 RAL-705 71 chr2L 3943802 3943825 chr2L 3943892 3943916 8 91 2.5 1.0 1.8 2.9 114 chr2L 3943802 intron fred - chr2L 3943859 intron fred - chr2L 3943916 intron fred - chr2L_8_3940001 chr2L_3940001 RAL-705 72 chr2L 3944959 3944990 chr2L 3945066 3945097 7 107 3.0 1.5 2.2 2.2 138 chr2L 3944959 intron fred - chr2L 3945028 intron fred - chr2L 3945097 intron fred - chr2L_7_3945001 chr2L_3945001 RAL-705 73 chr2L 3959174 3959202 chr2L 3959250 3959278 8 76 5.0 3.0 4.0 1.6 104 chr2L 3959174 intron fred - chr2L 3959226 intron fred - chr2L 3959278 intron fred - chr2L_8_3955001 chr2L_3955001 RAL-705 74 chr2L 4017313 4017330 chr2L 4017398 4017415 8 85 1.5 2.0 1.8 2.9 102 chr2L 4017313 intergenic not near genes chr2L 4017364 intergenic not near genes chr2L 4017415 intergenic not near genes chr2L_8_4015001 chr2L_4015001 RAL-705 75 chr2L 4062122 4062137 chr2L 4062202 4062218 7 81 1.5 0.5 1.0 3.5 96 chr2L 4062122 intron ed + chr2L 4062170 intron ed + chr2L 4062218 intron ed + chr2L_7_4060001 chr2L_4060001 RAL-705 76 chr2L 4066040 4066059 chr2L 4068864 4068884 Juan 4 2824 3.0 3.0 3.0 1.0 2844 chr2L 4066040 intron ed + chr2L 4067462 intron ed + chr2L 4068884 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-705 77 chr2L 4181294 4181304 chr2L 4183926 4183935 Burdock 8 2632 1.0 0.5 0.8 4.4 2641 chr2L 4181294 intergenic not near genes chr2L 4182614 intergenic not near genes chr2L 4183935 intergenic not near genes chr2L_8_4180001 chr2L_4180001 RAL-705 78 chr2L 4194557 4194572 chr2L 4194640 4194655 4 83 2.5 2.0 2.2 1.2 98 chr2L 4194557 intron CG3714 - chr2L 4194606 intron CG3714 - chr2L 4194655 intron CG3714 - chr2L_4_4190001 chr2L_4190001 RAL-705 79 chr2L 4224394 4224427 chr2L 4224473 4224505 10 79 0.0 1.5 0.8 5.6 111 chr2L 4224394 intergenic CG3702 - chr2L 4224450 intergenic CG3702 - chr2L 4224505 intergenic CG3702 - chr2L_10_4220001 chr2L_4220001 RAL-705 80 chr2L 4275079 4275104 chr2L 4275162 4275188 11 83 0.0 3.0 1.5 4.4 109 chr2L 4275079 intergenic not near genes chr2L 4275134 intergenic not near genes chr2L 4275188 intergenic not near genes chr2L_11_4275001 chr2L_4275001 RAL-705 81 chr2L 4424513 4424545 chr2L 4424624 4424656 6 111 0.5 1.0 0.8 3.3 143 chr2L 4424513 intron CG15431 - chr2L 4424584 intron CG15431 - chr2L 4424656 intron CG15431 - chr2L_6_4420001 chr2L_4420001 RAL-705 82 chr2L 4475957 4475990 chr2L 4476079 4476112 9 122 2.5 1.0 1.8 3.2 155 chr2L 4475957 intron ine - chr2L 4476034 intron ine - chr2L 4476112 intron ine - chr2L_9_4475001 chr2L_4475001 RAL-705 83 chr2L 4601708 4601731 chr2L 4609149 4609170 mdg1 9 7440 1.0 2.5 1.8 3.2 7462 chr2L 4601708 intron dp - chr2L 4605439 intron dp - chr2L 4609170 intron dp - chr2L_9_4605001 chr2L_4605001 RAL-705 84 chr2L 4658964 4658983 chr2L 4659223 4659242 9 259 3.0 7.0 5.0 1.5 278 chr2L 4658964 intergenic not near genes chr2L 4659103 intergenic not near genes chr2L 4659242 intergenic not near genes chr2L_9_4655001 chr2L_4655001 RAL-705 85 chr2L 4698781 4698811 chr2L 4699315 4699345 7 534 23.5 12.0 17.8 0.4 564 chr2L 4698781 intron CG34351 + chr2L 4699063 intron CG34351 + chr2L 4699345 intron CG34351 + chr2L_7_4695001 chr2L_4695001 RAL-705 86 chr2L 4741178 4741192 chr2L 4741264 4741276 5 86 1.0 2.0 1.5 2.0 98 chr2L 4741178 intron CG15630 - chr2L 4741227 intron CG15630 - chr2L 4741276 intron CG15630 - chr2L_5_4740001 chr2L_4740001 RAL-705 87 chr2L 4858464 4858482 chr2L 4858552 4858570 6 88 2.5 0.0 1.2 2.7 106 chr2L 4858464 intron pog + chr2L 4858517 intron pog + chr2L 4858570 intron pog + chr2L_6_4855001 chr2L_4855001 RAL-705 88 chr2L 4918177 4918197 chr2L 4923249 4923270 jockey 8 5073 4.5 4.5 4.5 1.5 5093 chr2L 4918177 intron hoe1 - chr2L 4920724 intron hoe1 - chr2L 4923270 intron hoe1 - chr2L_8_4920001 chr2L_4920001 RAL-705 89 chr2L 4953512 4953539 chr2L 4953753 4953780 pogo 8 241 4.0 0.5 2.2 2.5 268 chr2L 4953512 intergenic Jon25Bii - chr2L 4953646 intergenic not near genes chr2L 4953780 intergenic Jon25Bi - chr2L_8_4950001 chr2L_4950001 RAL-705 90 chr2L 4996090 4996116 chr2L 4996166 4996193 11 77 1.0 1.0 1.0 5.5 103 chr2L 4996090 intron Rtnl1 - chr2L 4996142 intron Rtnl1 - chr2L 4996193 intron Rtnl1 - chr2L_11_4995001 chr2L_4995001 RAL-705 91 chr2L 5000710 5000739 chr2L 5000783 5000815 6 76 3.0 3.0 3.0 1.5 105 chr2L 5000710 intron Rtnl1 - chr2L 5000762 intron Rtnl1 - chr2L 5000815 intron Rtnl1 - chr2L_6_5000001 chr2L_5000001 RAL-705 92 chr2L 5002785 5002809 chr2L 5002887 5002912 4 102 4.0 3.0 3.5 0.9 127 chr2L 5002785 intron Rtnl1 - chr2L 5002848 intron Rtnl1 - chr2L 5002912 intron Rtnl1 - chr2L_4_5000001 chr2L_5000001 RAL-705 93 chr2L 5022306 5022336 chr2L 5022503 5022533 7 197 19.0 21.0 20.0 0.3 227 chr2L 5022306 intron vkg - chr2L 5022420 intron vkg - chr2L 5022533 intron vkg - chr2L_7_5020001 chr2L_5020001 RAL-705 94 chr2L 5117299 5117325 chr2L 5117381 5117407 8 81 2.5 3.5 3.0 2.0 108 chr2L 5117299 intron Msp300 + chr2L 5117353 intron Msp300 + chr2L 5117407 intron Msp300 + chr2L_8_5115001 chr2L_5115001 RAL-705 95 chr2L 5147727 5147753 chr2L 5147957 5147985 11 232 2.5 2.0 2.2 3.4 258 chr2L 5147727 intron Msp300 + chr2L 5147856 intron Msp300 + chr2L 5147985 intron Msp300 + chr2L_11_5145001 chr2L_5145001 RAL-705 96 chr2L 5242935 5242937 chr2L 16217660 16217660 9 10974724 18.0 13.5 15.8 0.5 10974725 chr2L 5242935 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_9_10730001 chr2L_10730001 RAL-705 97 chr2L 5342771 5342798 chr2L 5345151 5345178 Doc 5 2380 3.0 5.0 4.0 1.0 2407 chr2L 5342771 intergenic not near genes chr2L 5343974 intergenic not near genes chr2L 5345178 intergenic not near genes chr2L_5_5340001 chr2L_5340001 RAL-705 98 chr2L 5398014 5398042 chr2L 5398094 5398120 7 79 1.0 1.5 1.2 3.2 106 chr2L 5398014 intergenic not near genes chr2L 5398067 intergenic not near genes chr2L 5398120 intergenic not near genes chr2L_7_5395001 chr2L_5395001 RAL-705 99 chr2L 5406030 5406042 chr2L 5406137 5406151 6 108 1.0 3.5 2.2 1.9 121 chr2L 5406030 intron H15 + chr2L 5406090 intron H15 + chr2L 5406151 intron H15 + chr2L_6_5405001 chr2L_5405001 RAL-705 100 chr2L 5622603 5622639 chr2L 5622680 5622713 8 76 3.5 4.5 4.0 1.6 110 chr2L 5622603 intron Cyp6a16 - chr2L 5622658 exon Cyp6a16 - chr2L 5622713 exon Cyp6a16 - chr2L_8_5620001 chr2L_5620001 RAL-705 101 chr2L 5743017 5743049 chr2L 5745195 5745227 5 2178 18.5 24.5 21.5 0.2 2210 chr2L 5743017 intron CG11030 + chr2L 5744122 intron CG11030 + chr2L 5745227 intron CG11030 + chr2L_5_5740001 chr2L_5740001 RAL-705 102 chr2L 5765544 5765578 chr2L 5765698 5765732 14 154 17.5 20.0 18.8 0.7 188 chr2L 5765544 intron obst-E - chr2L 5765638 intron obst-E - chr2L 5765732 intron obst-E - chr2L_14_5765001 chr2L_5765001 RAL-705 103 chr2L 5816185 5816217 chr2L 5816261 5816291 8 76 1.0 2.0 1.5 3.2 106 chr2L 5816185 intergenic not near genes chr2L 5816238 intergenic not near genes chr2L 5816291 intergenic not near genes chr2L_8_5815001 chr2L_5815001 RAL-705 104 chr2L 5827717 5827739 chr2L 5836725 5836747 roo 5 9008 2.5 4.5 3.5 1.1 9030 chr2L 5827717 intron TrissinR + chr2L 5832232 intron TrissinR + chr2L 5836747 intron TrissinR + chr2L_5_5830001 chr2L_5830001 RAL-705 105 chr2L 5870475 5870505 chr2L 5870552 5870582 7 77 2.5 1.5 2.0 2.3 107 chr2L 5870475 intron rau - chr2L 5870528 intron rau - chr2L 5870582 intron rau - chr2L_7_5870001 chr2L_5870001 RAL-705 106 chr2L 5904463 5904472 chr2L 5904543 5904552 6 80 1.5 0.0 0.8 3.3 89 chr2L 5904463 intron CG9021 - chr2L 5904508 intron CG9021 - chr2L 5904552 intron CG9021 - chr2L_6_5900001 chr2L_5900001 RAL-705 107 chr2L 5926506 5926519 chr2L 5926843 5926856 7 337 0.0 2.0 1.0 3.5 350 chr2L 5926506 intron dsf + chr2L 5926681 intron dsf + chr2L 5926856 intron dsf + chr2L_7_5925001 chr2L_5925001 RAL-705 108 chr2L 6050449 6050468 chr2L 6050553 6050572 10 104 2.5 2.0 2.2 3.1 123 chr2L 6050449 intergenic CG12393 +,CG9135 + chr2L 6050510 intergenic CG12393 +,CG9135 + chr2L 6050572 intergenic CG12393 +,CG9135 + chr2L_10_6050001 chr2L_6050001 RAL-705 109 chr2L 6185454 6185471 chr2L 6185532 6185549 5 78 3.0 2.5 2.8 1.3 95 chr2L 6185454 intron CG34380 + chr2L 6185502 intron CG34380 + chr2L 6185549 intron CG34380 + chr2L_5_6185001 chr2L_6185001 RAL-705 110 chr2L 6220125 6220137 chr2L 6220246 6220258 5 121 3.5 1.0 2.2 1.6 133 chr2L 6220125 intergenic not near genes chr2L 6220192 intergenic not near genes chr2L 6220258 intergenic not near genes chr2L_5_6220001 chr2L_6220001 RAL-705 111 chr2L 6279644 6279650 chr2L 6279723 6279729 INE-1 4 79 4.0 1.0 2.5 1.1 85 chr2L 6279644 intron Ddr + chr2L 6279686 intron Ddr + chr2L 6279729 intron Ddr + chr2L_4_6275001 chr2L_6275001 RAL-705 112 chr2L 6283942 6283980 chr2L 6284053 6284090 5 110 0.5 0.0 0.2 4.2 148 chr2L 6283942 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284090 intron Ddr + chr2L_5_6280001 chr2L_6280001 RAL-705 113 chr2L 6363149 6363163 chr2L 6366070 6366085 Burdock 6 2921 4.0 3.0 3.5 1.3 2936 chr2L 6363149 intergenic not near genes chr2L 6364617 intergenic not near genes chr2L 6366085 intergenic not near genes chr2L_6_6360001 chr2L_6360001 RAL-705 114 chr2L 6414986 6415015 chr2L 6415077 6415106 8 91 0.5 2.5 1.5 3.2 120 chr2L 6414986 3` UTR CG13982 + chr2L 6415046 3` UTR CG13982 + chr2L 6415106 3` UTR CG13982 + chr2L_8_6415001 chr2L_6415001 RAL-705 115 chr2L 6426861 6426887 chr2L 6445121 6445146 roo 10 18260 4.0 5.0 4.5 1.8 18285 chr2L 6426861 3` UTR CG9527 - chr2L 6436004 intron CG9527 - chr2L 6445146 exon CG9527 - chr2L_10_6435001 chr2L_6435001 RAL-705 116 chr2L 6544374 6544387 chr2L 6544466 6544479 4 92 0.0 1.0 0.5 2.7 105 chr2L 6544374 intron eya - chr2L 6544426 intron eya - chr2L 6544479 intron eya - chr2L_4_6540001 chr2L_6540001 RAL-705 117 chr2L 6598121 6598149 chr2L 6599078 6599106 8 957 1.0 4.0 2.5 2.3 985 chr2L 6598121 intron CG11319 - chr2L 6598614 intron CG11319 - chr2L 6599106 intron CG11319 - chr2L_8_6595001 chr2L_6595001 RAL-705 118 chr2L 6626886 6626919 chr2L 6626971 6627004 9 85 1.5 3.0 2.2 2.8 118 chr2L 6626886 intron Oatp26F - chr2L 6626945 intron Oatp26F - chr2L 6627004 intron Oatp26F - chr2L_9_6625001 chr2L_6625001 RAL-705 119 chr2L 6740743 6740756 chr2L 6740830 6740843 4 87 0.0 6.5 3.2 1.0 100 chr2L 6740743 intergenic not near genes chr2L 6740793 intergenic not near genes chr2L 6740843 intergenic not near genes chr2L_4_6740001 chr2L_6740001 RAL-705 120 chr2L 6771983 6772012 chr2L 6772070 6772097 6 86 5.5 3.5 4.5 1.1 114 chr2L 6771983 intron CG11321 - chr2L 6772040 intron CG11321 - chr2L 6772097 intron CG11321 - chr2L_6_6770001 chr2L_6770001 RAL-705 121 chr2L 6876775 6876806 chr2L 6882963 6882996 diver 7 6190 5.5 0.5 3.0 1.8 6221 chr2L 6876775 intron Nlg2 + chr2L 6879886 intron Nlg2 + chr2L 6882996 intron Nlg2 + chr2L_7_6875001 chr2L_6875001 RAL-705 122 chr2L 7005233 7005255 chr2L 7005329 7005351 6 96 0.5 2.0 1.2 2.7 118 chr2L 7005233 intron uif - chr2L 7005292 intron uif - chr2L 7005351 intron uif - chr2L_6_7005001 chr2L_7005001 RAL-705 123 chr2L 7042061 7042087 chr2L 7042150 7042176 4 89 3.5 3.5 3.5 0.9 115 chr2L 7042061 intron milt + chr2L 7042118 intron milt + chr2L 7042176 intron milt + chr2L_4_7040001 chr2L_7040001 RAL-705 124 chr2L 7126863 7126878 chr2L 7126942 7126957 7 79 0.5 0.0 0.2 5.8 94 chr2L 7126863 intron Pvf3 - chr2L 7126910 intron Pvf3 - chr2L 7126957 intron Pvf3 - chr2L_7_7125001 chr2L_7125001 RAL-705 125 chr2L 7217241 7217268 chr2L 7217346 7217373 8 105 1.5 5.5 3.5 1.8 132 chr2L 7217241 intron CG13784 - chr2L 7217307 intron CG13784 - chr2L 7217373 intron CG13784 - chr2L_8_7215001 chr2L_7215001 RAL-705 126 chr2L 7225246 7225270 chr2L 7225330 7225354 6 84 0.5 1.0 0.8 3.3 108 chr2L 7225246 intron Ndae1 - chr2L 7225300 intron Ndae1 - chr2L 7225354 intron Ndae1 - chr2L_6_7225001 chr2L_7225001 RAL-705 127 chr2L 7228113 7228144 chr2L 7228199 7228229 6 86 2.5 0.5 1.5 2.4 116 chr2L 7228113 intron,exon Ndae1 -,CG43799 + chr2L 7228171 intron,exon Ndae1 -,CG43799 + chr2L 7228229 intron,exon Ndae1 -,CG43799 + chr2L_6_7225001 chr2L_7225001 RAL-705 128 chr2L 7249619 7249648 chr2L 7249702 7249731 8 83 2.0 2.0 2.0 2.7 112 chr2L 7249619 intergenic Ndae1 - chr2L 7249675 intergenic Ndae1 - chr2L 7249731 intergenic Ndae1 - chr2L_8_7245001 chr2L_7245001 RAL-705 129 chr2L 7343330 7343359 chr2L 7350445 7350474 roo 4 7115 2.0 2.5 2.2 1.2 7144 chr2L 7343330 intron Wnt6 + chr2L 7346902 intron Wnt6 + chr2L 7350474 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-705 130 chr2L 7351056 7351081 chr2L 7351164 7351189 8 108 2.0 0.5 1.2 3.6 133 chr2L 7351056 intron Wnt6 + chr2L 7351122 intron Wnt6 + chr2L 7351189 exon Wnt6 + chr2L_8_7350001 chr2L_7350001 RAL-705 131 chr2L 7436196 7436213 chr2L 7436290 7436307 8 94 1.0 2.0 1.5 3.2 111 chr2L 7436196 intergenic not near genes chr2L 7436252 intergenic not near genes chr2L 7436307 intergenic not near genes chr2L_8_7435001 chr2L_7435001 RAL-705 132 chr2L 7449743 7449776 chr2L 7449820 7449853 8 77 2.5 3.0 2.8 2.1 110 chr2L 7449743 5` UTR santa-maria - chr2L 7449798 5` UTR santa-maria - chr2L 7449853 5` UTR santa-maria - chr2L_8_7445001 chr2L_7445001 RAL-705 133 chr2L 7515545 7515572 chr2L 7515788 7515815 5 243 1.0 0.0 0.5 3.3 270 chr2L 7515545 intron RapGAP1 - chr2L 7515680 intron RapGAP1 - chr2L 7515815 intron RapGAP1 - chr2L_5_7515001 chr2L_7515001 RAL-705 134 chr2L 7555222 7555234 chr2L 7555299 7555311 5 77 0.0 4.0 2.0 1.7 89 chr2L 7555222 intron RapGAP1 - chr2L 7555266 intron RapGAP1 - chr2L 7555311 intron RapGAP1 - chr2L_5_7555001 chr2L_7555001 RAL-705 135 chr2L 7557078 7557104 chr2L 7557441 7557467 8 363 0.5 0.5 0.5 5.3 389 chr2L 7557078 intron RapGAP1 - chr2L 7557272 intron RapGAP1 - chr2L 7557467 intron RapGAP1 - chr2L_8_7555001 chr2L_7555001 RAL-705 136 chr2L 7664046 7664066 chr2L 7664143 7664163 7 97 6.0 3.0 4.5 1.3 117 chr2L 7664046 intron Slob - chr2L 7664104 intron Slob - chr2L 7664163 intron Slob - chr2L_7_7660001 chr2L_7660001 RAL-705 137 chr2L 7759242 7759255 chr2L 7759323 7759336 4 81 0.5 0.5 0.5 2.7 94 chr2L 7759242 intron CG7196 + chr2L 7759289 intron CG7196 + chr2L 7759336 intron CG7196 + chr2L_4_7755001 chr2L_7755001 RAL-705 138 chr2L 7841285 7841313 chr2L 7841471 7841499 13 186 3.5 1.0 2.2 4.1 214 chr2L 7841285 intergenic CG14537 + chr2L 7841392 intergenic CG14537 + chr2L 7841499 intergenic CG14537 + chr2L_13_7840001 chr2L_7840001 RAL-705 139 chr2L 7922741 7922773 chr2L 7922822 7922854 5 81 2.0 4.0 3.0 1.2 113 chr2L 7922741 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922854 intron Snoo - chr2L_5_7920001 chr2L_7920001 RAL-705 140 chr2L 7959041 7959055 chr2L 7960452 7960465 pogo 6 1411 3.5 4.5 4.0 1.2 1424 chr2L 7959041 intron Snoo - chr2L 7959753 intron Snoo - chr2L 7960465 intron Snoo - chr2L_6_7955001 chr2L_7955001 RAL-705 141 chr2L 7997040 7997062 chr2L 7997140 7997162 5 100 0.5 1.5 1.0 2.5 122 chr2L 7997040 intron CG7227 - chr2L 7997101 intron CG7227 - chr2L 7997162 intron CG7227 - chr2L_5_7995001 chr2L_7995001 RAL-705 142 chr2L 8013616 8013634 chr2L 8018820 8018837 copia 5 5203 2.5 0.0 1.2 2.3 5221 chr2L 8013616 intron Tg + chr2L 8016226 intron Tg + chr2L 8018837 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-705 143 chr2L 8244733 8244749 chr2L 8244855 8244871 5 122 1.5 1.0 1.2 2.3 138 chr2L 8244733 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244871 intron CG8086 - chr2L_5_8240001 chr2L_8240001 RAL-705 144 chr2L 8258179 8258192 chr2L 8258276 8258289 6 97 4.5 5.0 4.8 1.0 110 chr2L 8258179 intergenic Btk29A -,mir-2b-1 - chr2L 8258234 intergenic Btk29A -,mir-2b-1 - chr2L 8258289 intergenic Btk29A -,mir-2b-1 - chr2L_6_8255001 chr2L_8255001 RAL-705 145 chr2L 8351564 8351588 chr2L 8351641 8351665 4 77 0.0 2.0 1.0 2.0 101 chr2L 8351564 intergenic CG7778 + chr2L 8351614 intergenic not near genes chr2L 8351665 intergenic not near genes chr2L_4_8350001 chr2L_8350001 RAL-705 146 chr2L 8452424 8452451 chr2L 8461595 8461622 roo 9 9171 2.5 4.5 3.5 2.0 9198 chr2L 8452424 intron fu12 - chr2L 8457023 intron fu12 - chr2L 8461622 intron fu12 - chr2L_9_8455001 chr2L_8455001 RAL-705 147 chr2L 8498205 8498238 chr2L 8498286 8498319 7 81 1.0 4.5 2.8 1.8 114 chr2L 8498205 intron Dh31 - chr2L 8498262 intron Dh31 - chr2L 8498319 intron Dh31 - chr2L_7_8495001 chr2L_8495001 RAL-705 148 chr2L 8508988 8509002 chr2L 8509090 8509104 4 102 0.0 2.5 1.2 1.8 116 chr2L 8508988 intergenic CG13096 - chr2L 8509046 intergenic CG13096 - chr2L 8509104 3` UTR CG13096 - chr2L_4_8505001 chr2L_8505001 RAL-705 149 chr2L 8538166 8538180 chr2L 8538242 8538256 7 76 3.0 0.0 1.5 2.8 90 chr2L 8538166 intron CG17834 + chr2L 8538211 intron CG17834 + chr2L 8538256 intron CG17834 + chr2L_7_8535001 chr2L_8535001 RAL-705 150 chr2L 8605962 8605998 chr2L 8606038 8606074 9 76 1.5 0.5 1.0 4.5 112 chr2L 8605962 intron Sema-1a + chr2L 8606018 intron Sema-1a + chr2L 8606074 intron Sema-1a + chr2L_9_8605001 chr2L_8605001 RAL-705 151 chr2L 8704946 8704972 chr2L 8705125 8705150 7 178 8.0 6.5 7.2 0.9 204 chr2L 8704946 intron,5` UTR Hnf4 -,CR44992 + chr2L 8705048 intron,5` UTR Hnf4 -,CR44992 + chr2L 8705150 intron,5` UTR Hnf4 -,CR44992 + chr2L_7_8705001 chr2L_8705001 RAL-705 152 chr2L 8723116 8723145 chr2L 8731493 8731521 Tirant 10 8377 0.5 0.0 0.2 8.3 8405 chr2L 8723116 intron raw - chr2L 8727318 intron raw - chr2L 8731521 intron raw - chr2L_10_8725001 chr2L_8725001 RAL-705 153 chr2L 8741892 8741904 chr2L 8741981 8741993 5 88 9.5 1.0 5.2 0.8 101 chr2L 8741892 intergenic not near genes chr2L 8741942 intergenic not near genes chr2L 8741993 intergenic not near genes chr2L_5_8740001 chr2L_8740001 RAL-705 154 chr2L 8799799 8799829 chr2L 8799915 8799945 9 115 1.0 2.0 1.5 3.6 146 chr2L 8799799 intergenic not near genes chr2L 8799872 intergenic not near genes chr2L 8799945 intergenic not near genes chr2L_9_8795001 chr2L_8795001 RAL-705 155 chr2L 8976223 8976256 chr2L 8976314 8976347 11 91 1.0 1.0 1.0 5.5 124 chr2L 8976223 intergenic not near genes chr2L 8976285 intergenic not near genes chr2L 8976347 intergenic not near genes chr2L_11_8975001 chr2L_8975001 RAL-705 156 chr2L 8997261 8997292 chr2L 8997625 8997656 9 364 13.5 24.0 18.8 0.5 395 chr2L 8997261 exon alien - chr2L 8997458 intergenic alien -,CG18661 + chr2L 8997656 5` UTR CG18661 + chr2L_9_8995001 chr2L_8995001 RAL-705 157 chr2L 9000281 9000309 chr2L 9007791 9007819 roo 11 7510 4.5 3.0 3.8 2.3 7538 chr2L 9000281 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007819 intergenic not near genes chr2L_11_9000001 chr2L_9000001 RAL-705 158 chr2L 9053408 9053429 chr2L 9053643 9053664 6 235 0.5 0.5 0.5 4.0 256 chr2L 9053408 exon CG31708 - chr2L 9053536 intron CG31708 - chr2L 9053664 intron CG31708 - chr2L_6_9050001 chr2L_9050001 RAL-705 159 chr2L 9068302 9068318 chr2L 9069146 9069162 4 844 10.0 9.5 9.8 0.4 860 chr2L 9068302 intron CG31708 - chr2L 9068732 intron CG31708 - chr2L 9069162 intron CG31708 - chr2L_4_9065001 chr2L_9065001 RAL-705 160 chr2L 9077034 9077063 chr2L 9077587 9077616 11 553 0.5 4.5 2.5 3.1 582 chr2L 9077034 intergenic CG12439 + chr2L 9077325 exon CG12439 + chr2L 9077616 exon CG12439 + chr2L_11_9075001 chr2L_9075001 RAL-705 161 chr2L 9084336 9084340 chr2L 16217660 16217660 19 7133321 11.0 13.5 12.2 1.4 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_19_12650001 chr2L_12650001 RAL-705 162 chr2L 9114094 9114126 chr2L 9114173 9114205 8 79 1.5 1.0 1.2 3.6 111 chr2L 9114094 intergenic not near genes chr2L 9114150 intergenic not near genes chr2L 9114205 intergenic not near genes chr2L_8_9110001 chr2L_9110001 RAL-705 163 chr2L 9173072 9173093 chr2L 9173149 9173170 4 77 0.5 1.5 1.0 2.0 98 chr2L 9173072 intron tai + chr2L 9173121 intron tai + chr2L 9173170 intron tai + chr2L_4_9170001 chr2L_9170001 RAL-705 164 chr2L 9180113 9180137 chr2L 9180193 9180222 5 84 2.5 4.0 3.2 1.2 109 chr2L 9180113 intron tai + chr2L 9180168 intron tai + chr2L 9180222 intron tai + chr2L_5_9180001 chr2L_9180001 RAL-705 165 chr2L 9251146 9251176 chr2L 9251243 9251271 4 96 2.0 3.5 2.8 1.1 125 chr2L 9251146 intergenic aust -,borr - chr2L 9251208 intergenic aust -,borr - chr2L 9251271 intergenic borr -,aust - chr2L_4_9250001 chr2L_9250001 RAL-705 166 chr2L 9262110 9262141 chr2L 9262215 9262246 8 105 2.0 2.5 2.2 2.5 136 chr2L 9262110 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262178 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262246 intron,intron Ggamma30A +,CR45262 - chr2L_8_9260001 chr2L_9260001 RAL-705 167 chr2L 9286954 9286986 chr2L 9287032 9287064 9 78 2.0 1.0 1.5 3.6 110 chr2L 9286954 intron Ggamma30A + chr2L 9287009 intron Ggamma30A + chr2L 9287064 intron Ggamma30A + chr2L_9_9285001 chr2L_9285001 RAL-705 168 chr2L 9297385 9297403 chr2L 9297462 9297480 7 77 2.5 5.0 3.8 1.5 95 chr2L 9297385 3` UTR Ggamma30A + chr2L 9297432 3` UTR Ggamma30A + chr2L 9297480 3` UTR Ggamma30A + chr2L_7_9295001 chr2L_9295001 RAL-705 169 chr2L 9303516 9303548 chr2L 9303596 9303628 11 79 2.5 4.5 3.5 2.4 112 chr2L 9303516 intergenic not near genes chr2L 9303572 intergenic not near genes chr2L 9303628 intergenic not near genes chr2L_11_9300001 chr2L_9300001 RAL-705 170 chr2L 9335012 9335034 chr2L 9335091 9335113 5 79 3.5 0.5 2.0 1.7 101 chr2L 9335012 intron Eaat1 + chr2L 9335062 intron Eaat1 + chr2L 9335113 intron Eaat1 + chr2L_5_9335001 chr2L_9335001 RAL-705 171 chr2L 9393505 9393528 chr2L 9396472 9396495 jockey 5 2967 1.5 0.5 1.0 2.5 2990 chr2L 9393505 intron Shawl - chr2L 9395000 intron Shawl - chr2L 9396495 intron Shawl - chr2L_5_9395001 chr2L_9395001 RAL-705 172 chr2L 9413503 9413529 chr2L 9413580 9413606 7 77 2.0 1.0 1.5 2.8 103 chr2L 9413503 intron Shawl - chr2L 9413554 intron Shawl - chr2L 9413606 intron Shawl - chr2L_7_9410001 chr2L_9410001 RAL-705 173 chr2L 9415807 9415823 chr2L 9415884 9415900 6 77 1.5 1.5 1.5 2.4 93 chr2L 9415807 intergenic not near genes chr2L 9415854 intergenic not near genes chr2L 9415900 intergenic not near genes chr2L_6_9415001 chr2L_9415001 RAL-705 174 chr2L 9441323 9441356 chr2L 9441427 9441460 8 104 0.5 1.5 1.0 4.0 137 chr2L 9441323 intron numb + chr2L 9441392 intron numb + chr2L 9441460 intron numb + chr2L_8_9440001 chr2L_9440001 RAL-705 175 chr2L 9456932 9456952 chr2L 9457013 9457033 5 81 1.0 2.0 1.5 2.0 101 chr2L 9456932 intron numb + chr2L 9456982 intron numb + chr2L 9457033 intron numb + chr2L_5_9455001 chr2L_9455001 RAL-705 176 chr2L 9488570 9488577 chr2L 9488658 9488659 6 87 9.0 11.0 10.0 0.5 89 chr2L 9488570 intergenic not near genes chr2L 9488614 intergenic not near genes chr2L 9488659 intergenic not near genes chr2L_6_9485001 chr2L_9485001 RAL-705 177 chr2L 9490529 9490552 chr2L 9490609 9490632 6 80 0.5 2.5 1.5 2.4 103 chr2L 9490529 intergenic not near genes chr2L 9490580 intergenic not near genes chr2L 9490632 intergenic not near genes chr2L_6_9490001 chr2L_9490001 RAL-705 178 chr2L 9543770 9543786 chr2L 9543847 9543863 5 77 1.5 1.0 1.2 2.3 93 chr2L 9543770 intergenic Cpr30B +,CG13113 + chr2L 9543816 intergenic Cpr30B +,CG13113 + chr2L 9543863 intergenic Cpr30B +,CG13113 + chr2L_5_9540001 chr2L_9540001 RAL-705 179 chr2L 9619498 9619522 chr2L 9619835 9619859 4 337 1.5 1.5 1.5 1.6 361 chr2L 9619498 intron GlcAT-S + chr2L 9619678 intron GlcAT-S + chr2L 9619859 intron GlcAT-S + chr2L_4_9615001 chr2L_9615001 RAL-705 180 chr2L 9770772 9770794 chr2L 9770869 9770891 1360 4 97 3.5 3.0 3.2 1.0 119 chr2L 9770772 intron ppk18 - chr2L 9770832 intron ppk18 - chr2L 9770891 exon ppk18 - chr2L_4_9770001 chr2L_9770001 RAL-705 181 chr2L 9829575 9829594 chr2L 9829777 9829796 7 202 1.0 2.0 1.5 2.8 221 chr2L 9829575 intron nAChRalpha6 - chr2L 9829686 intron nAChRalpha6 - chr2L 9829796 intron nAChRalpha6 - chr2L_7_9825001 chr2L_9825001 RAL-705 182 chr2L 9837433 9837438 chr2L 9837510 9837516 4 78 2.5 1.0 1.8 1.4 83 chr2L 9837433 intron nAChRalpha6 - chr2L 9837474 intron nAChRalpha6 - chr2L 9837516 intron nAChRalpha6 - chr2L_4_9835001 chr2L_9835001 RAL-705 183 chr2L 9973728 9973754 chr2L 9980847 9980873 HMS-Beagle 9 7119 2.0 5.0 3.5 2.0 7145 chr2L 9973728 intergenic not near genes chr2L 9977300 intergenic not near genes chr2L 9980873 intergenic not near genes chr2L_9_9975001 chr2L_9975001 RAL-705 184 chr2L 9986353 9986385 chr2L 9986446 9986479 7 94 1.0 2.0 1.5 2.8 126 chr2L 9986353 intron bib + chr2L 9986416 intron bib + chr2L 9986479 intron bib + chr2L_7_9985001 chr2L_9985001 RAL-705 185 chr2L 10051735 10051753 chr2L 10051820 10051837 7 85 5.0 6.5 5.8 1.0 102 chr2L 10051735 5` UTR CR44874 + chr2L 10051786 5` UTR CR44874 + chr2L 10051837 5` UTR CR44874 + chr2L_7_10050001 chr2L_10050001 RAL-705 186 chr2L 10095633 10095657 chr2L 10095713 10095737 7 80 2.5 1.5 2.0 2.3 104 chr2L 10095633 intron CG44153 - chr2L 10095685 intron CG44153 - chr2L 10095737 intron CG44153 - chr2L_7_10095001 chr2L_10095001 RAL-705 187 chr2L 10153203 10153234 chr2L 10153282 10153313 5 79 2.0 1.5 1.8 1.8 110 chr2L 10153203 intron,exon CG44153 -,CG4839 + chr2L 10153258 intron,intron CG44153 -,CG4839 + chr2L 10153313 intron,intron CG44153 -,CG4839 + chr2L_5_10150001 chr2L_10150001 RAL-705 188 chr2L 10156341 10156355 chr2L 10163811 10163825 blood 5 7470 2.5 3.0 2.8 1.3 7484 chr2L 10156341 intron,3` UTR CG44153 -,CG4839 + chr2L 10160083 intron CG44153 - chr2L 10163825 intron CG44153 - chr2L_5_10160001 chr2L_10160001 RAL-705 189 chr2L 10177903 10177929 chr2L 10177983 10178009 4 80 2.5 2.5 2.5 1.1 106 chr2L 10177903 intron CG44153 - chr2L 10177956 intron CG44153 - chr2L 10178009 intron CG44153 - chr2L_4_10175001 chr2L_10175001 RAL-705 190 chr2L 10209851 10209858 chr2L 10209928 10209935 5 77 2.5 0.0 1.2 2.3 84 chr2L 10209851 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209893 3` UTR CG5727 - chr2L 10209935 3` UTR CG5727 - chr2L_5_10205001 chr2L_10205001 RAL-705 191 chr2L 10397543 10397568 chr2L 10397623 10397648 7 80 1.5 2.5 2.0 2.3 105 chr2L 10397543 intron Cnot4 + chr2L 10397596 intron Cnot4 + chr2L 10397648 intron Cnot4 + chr2L_7_10395001 chr2L_10395001 RAL-705 192 chr2L 10490275 10490306 chr2L 10490357 10490388 13 82 3.5 2.0 2.8 3.4 113 chr2L 10490275 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490332 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490388 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_13_10490001 chr2L_10490001 RAL-705 193 chr2L 10540872 10540880 chr2L 10540950 10540957 4 78 0.0 2.5 1.2 1.8 85 chr2L 10540872 intergenic not near genes chr2L 10540914 intergenic not near genes chr2L 10540957 intergenic not near genes chr2L_4_10540001 chr2L_10540001 RAL-705 194 chr2L 10572699 10572731 chr2L 10572780 10572812 13 81 4.0 3.5 3.8 2.7 113 chr2L 10572699 intron Trim9 + chr2L 10572756 intron Trim9 + chr2L 10572812 intron Trim9 + chr2L_13_10570001 chr2L_10570001 RAL-705 195 chr2L 10580684 10580720 chr2L 10580760 10580796 11 75 1.0 1.0 1.0 5.5 112 chr2L 10580684 intron Trim9 + chr2L 10580740 intron Trim9 + chr2L 10580796 intron Trim9 + chr2L_11_10580001 chr2L_10580001 RAL-705 196 chr2L 10592850 10592863 chr2L 10600512 10600525 opus 4 7662 0.5 1.5 1.0 2.0 7675 chr2L 10592850 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600525 intron Trim9 + chr2L_4_10595001 chr2L_10595001 RAL-705 197 chr2L 10698144 10698157 chr2L 10698227 10698240 4 82 0.0 4.5 2.2 1.2 96 chr2L 10698144 5` UTR CR44181 + chr2L 10698192 5` UTR CR44181 + chr2L 10698240 intergenic CR44181 +,CG7300 - chr2L_4_10695001 chr2L_10695001 RAL-705 198 chr2L 10704919 10704929 chr2L 10705014 10705024 7 95 2.0 1.0 1.5 2.8 105 chr2L 10704919 intron,3` UTR Lip2 -,CG6415 + chr2L 10704972 intron Lip2 - chr2L 10705024 intron Lip2 - chr2L_7_10700001 chr2L_10700001 RAL-705 199 chr2L 10705454 10705481 chr2L 10705535 10705563 9 82 0.5 3.0 1.8 3.2 109 chr2L 10705454 exon Lip2 - chr2L 10705508 intron Lip2 - chr2L 10705563 intron Lip2 - chr2L_9_10705001 chr2L_10705001 RAL-705 200 chr2L 10721291 10721307 chr2L 10721370 10721386 4 79 1.5 1.0 1.2 1.8 95 chr2L 10721291 intergenic not near genes chr2L 10721338 intergenic not near genes chr2L 10721386 intergenic not near genes chr2L_4_10720001 chr2L_10720001 RAL-705 201 chr2L 10803793 10803806 chr2L 10803879 10803892 4 86 0.5 3.0 1.8 1.4 99 chr2L 10803793 intergenic Nos - chr2L 10803842 intergenic Nos - chr2L 10803892 intergenic Nos - chr2L_4_10800001 chr2L_10800001 RAL-705 202 chr2L 10862013 10862036 chr2L 10862114 10862137 4 101 2.0 1.0 1.5 1.6 124 chr2L 10862013 intergenic Stam +,CR43807 - chr2L 10862075 intergenic Stam +,CR43807 - chr2L 10862137 intergenic CR43807 -,Stam + chr2L_4_10860001 chr2L_10860001 RAL-705 203 chr2L 10862846 10862873 chr2L 10864460 10864487 Rt1c 6 1614 3.0 5.5 4.2 1.2 1641 chr2L 10862846 3` UTR CR43807 - chr2L 10863666 intron CR43807 - chr2L 10864487 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-705 204 chr2L 10946949 10946976 chr2L 10956164 10956191 roo 5 9215 4.0 7.0 5.5 0.8 9242 chr2L 10946949 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956191 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-705 205 chr2L 11174649 11174657 chr2L 11174726 11174734 4 77 0.0 5.0 2.5 1.1 85 chr2L 11174649 intron Ca-beta - chr2L 11174692 intron Ca-beta - chr2L 11174734 intron Ca-beta - chr2L_4_11170001 chr2L_11170001 RAL-705 206 chr2L 11183783 11183806 chr2L 11183879 11183902 10 96 2.0 1.5 1.8 3.6 119 chr2L 11183783 intron Ca-beta - chr2L 11183842 intron Ca-beta - chr2L 11183902 intron Ca-beta - chr2L_10_11180001 chr2L_11180001 RAL-705 207 chr2L 11357980 11358013 chr2L 11358058 11358091 4 78 0.0 1.0 0.5 2.7 111 chr2L 11357980 intergenic not near genes chr2L 11358036 intergenic not near genes chr2L 11358091 intergenic not near genes chr2L_4_11355001 chr2L_11355001 RAL-705 208 chr2L 11432974 11432998 chr2L 11433071 11433094 6 96 5.5 3.0 4.2 1.2 120 chr2L 11432974 intergenic not near genes chr2L 11433034 intergenic not near genes chr2L 11433094 intergenic not near genes chr2L_6_11430001 chr2L_11430001 RAL-705 209 chr2L 11496635 11496649 chr2L 11496713 11496727 4 78 1.0 1.0 1.0 2.0 92 chr2L 11496635 intergenic CG6488 - chr2L 11496681 intergenic CG6488 - chr2L 11496727 intergenic CG6488 - chr2L_4_11495001 chr2L_11495001 RAL-705 210 chr2L 11537987 11538001 chr2L 11538080 11538093 7 93 0.5 4.5 2.5 2.0 106 chr2L 11537987 intergenic not near genes chr2L 11538040 intergenic not near genes chr2L 11538093 intergenic not near genes chr2L_7_11535001 chr2L_11535001 RAL-705 211 chr2L 11540584 11540610 chr2L 11547986 11548012 Tabor 5 7402 0.5 1.5 1.0 2.5 7428 chr2L 11540584 intergenic not near genes chr2L 11544298 intergenic not near genes chr2L 11548012 intergenic not near genes chr2L_5_11540001 chr2L_11540001 RAL-705 212 chr2L 11559285 11559306 chr2L 11560071 11560092 7 786 15.5 17.0 16.2 0.4 807 chr2L 11559285 intergenic not near genes chr2L 11559688 intergenic not near genes chr2L 11560092 intergenic not near genes chr2L_7_11555001 chr2L_11555001 RAL-705 213 chr2L 11563641 11563659 chr2L 11568845 11568863 copia 7 5204 2.0 2.0 2.0 2.3 5222 chr2L 11563641 intergenic not near genes chr2L 11566252 intergenic not near genes chr2L 11568863 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-705 214 chr2L 11612665 11612693 chr2L 11612753 11612781 11 88 2.0 5.5 3.8 2.3 116 chr2L 11612665 intron kek2 + chr2L 11612723 intron kek2 + chr2L 11612781 intron kek2 + chr2L_11_11610001 chr2L_11610001 RAL-705 215 chr2L 11682971 11682997 chr2L 11683140 11683166 6 169 2.0 2.5 2.2 1.9 195 chr2L 11682971 intergenic not near genes chr2L 11683068 intergenic not near genes chr2L 11683166 intergenic not near genes chr2L_6_11680001 chr2L_11680001 RAL-705 216 chr2L 11688761 11688790 chr2L 11688838 11688866 8 77 1.5 1.0 1.2 3.6 105 chr2L 11688761 intergenic not near genes chr2L 11688814 intergenic not near genes chr2L 11688866 intergenic not near genes chr2L_8_11685001 chr2L_11685001 RAL-705 217 chr2L 11713510 11713540 chr2L 11720978 11721007 blood 5 7467 1.5 2.0 1.8 1.8 7497 chr2L 11713510 intergenic not near genes chr2L 11717258 intergenic not near genes chr2L 11721007 intergenic CR44143 + chr2L_5_11715001 chr2L_11715001 RAL-705 218 chr2L 11735491 11735511 chr2L 11735575 11735595 4 84 2.0 1.5 1.8 1.4 104 chr2L 11735491 intergenic not near genes chr2L 11735543 intergenic not near genes chr2L 11735595 intergenic not near genes chr2L_4_11735001 chr2L_11735001 RAL-705 219 chr2L 11738853 11738886 chr2L 11738944 11738977 8 91 0.5 1.5 1.0 4.0 124 chr2L 11738853 intergenic Vha100-5 + chr2L 11738915 intergenic Vha100-5 + chr2L 11738977 5` UTR Vha100-5 + chr2L_8_11735001 chr2L_11735001 RAL-705 220 chr2L 11752868 11752886 chr2L 11753158 11753176 7 289 1.5 1.0 1.2 3.2 308 chr2L 11752868 intergenic CG42470 - chr2L 11753022 3` UTR CG42470 - chr2L 11753176 3` UTR CG42470 - chr2L_7_11750001 chr2L_11750001 RAL-705 221 chr2L 11765268 11765294 chr2L 11765479 11765505 5 211 2.5 1.5 2.0 1.7 237 chr2L 11765268 intergenic not near genes chr2L 11765386 intergenic not near genes chr2L 11765505 intergenic not near genes chr2L_5_11765001 chr2L_11765001 RAL-705 222 chr2L 11769934 11769960 chr2L 11770010 11770036 7 76 3.5 2.0 2.8 1.8 102 chr2L 11769934 intergenic not near genes chr2L 11769985 intergenic not near genes chr2L 11770036 intergenic not near genes chr2L_7_11765001 chr2L_11765001 RAL-705 223 chr2L 11865519 11865536 chr2L 11865631 11865646 5 112 7.5 4.5 6.0 0.7 127 chr2L 11865519 intron Pde1c - chr2L 11865582 intron Pde1c - chr2L 11865646 intron Pde1c - chr2L_5_11865001 chr2L_11865001 RAL-705 224 chr2L 11869639 11869673 chr2L 11869718 11869754 15 81 0.5 2.0 1.2 6.8 115 chr2L 11869639 intron Pde1c - chr2L 11869696 intron Pde1c - chr2L 11869754 intron Pde1c - chr2L_15_11865001 chr2L_11865001 RAL-705 225 chr2L 11890865 11890895 chr2L 11890943 11890973 13 78 4.0 3.0 3.5 2.9 108 chr2L 11890865 intron Pde1c - chr2L 11890919 intron Pde1c - chr2L 11890973 intron Pde1c - chr2L_13_11890001 chr2L_11890001 RAL-705 226 chr2L 12031389 12031416 chr2L 12031466 12031497 8 80 1.5 0.0 0.8 4.4 108 chr2L 12031389 intron dmGlut + chr2L 12031443 intron dmGlut + chr2L 12031497 intron dmGlut + chr2L_8_12030001 chr2L_12030001 RAL-705 227 chr2L 12254031 12254054 chr2L 12254123 12254146 5 92 1.0 0.0 0.5 3.3 115 chr2L 12254031 intron aret + chr2L 12254088 intron aret + chr2L 12254146 intron aret + chr2L_5_12250001 chr2L_12250001 RAL-705 228 chr2L 12276426 12276447 chr2L 12276503 12276524 5 77 2.0 2.5 2.2 1.6 98 chr2L 12276426 intron aret + chr2L 12276475 intron aret + chr2L 12276524 intron aret + chr2L_5_12275001 chr2L_12275001 RAL-705 229 chr2L 12487885 12487918 chr2L 12487965 12487999 12 81 8.0 5.5 6.8 1.5 114 chr2L 12487885 intron bun - chr2L 12487942 intron bun - chr2L 12487999 intron bun - chr2L_12_12485001 chr2L_12485001 RAL-705 230 chr2L 12490086 12490099 chr2L 12490225 12490238 9 139 1.5 4.0 2.8 2.4 152 chr2L 12490086 intron bun - chr2L 12490162 intron bun - chr2L 12490238 intron bun - chr2L_9_12490001 chr2L_12490001 RAL-705 231 chr2L 12491496 12491509 chr2L 12491597 12491610 4 101 2.0 0.5 1.2 1.8 114 chr2L 12491496 intron bun - chr2L 12491553 intron bun - chr2L 12491610 intron bun - chr2L_4_12490001 chr2L_12490001 RAL-705 232 chr2L 12529277 12529446 chr2L 12529410 12529518 5 87 3.0 4.0 3.5 1.1 241 chr2L 12529277 intron bun - chr2L 12529398 intron bun - chr2L 12529518 intron bun - chr2L_5_12525001 chr2L_12525001 RAL-705 233 chr2L 12558325 12558343 chr2L 12565454 12565472 HMS-Beagle 7 7129 3.0 1.0 2.0 2.3 7147 chr2L 12558325 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565472 intergenic not near genes chr2L_7_12560001 chr2L_12560001 RAL-705 234 chr2L 12693838 12693872 chr2L 12693915 12693949 9 77 1.0 0.0 0.5 6.0 111 chr2L 12693838 exon CG6153 + chr2L 12693894 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693949 3` UTR CG5780 - chr2L_9_12690001 chr2L_12690001 RAL-705 235 chr2L 12731054 12731084 chr2L 12735821 12735851 F-element 10 4767 2.5 2.5 2.5 2.9 4797 chr2L 12731054 intron MRP + chr2L 12733452 intron MRP + chr2L 12735851 intron MRP + chr2L_10_12730001 chr2L_12730001 RAL-705 236 chr2L 12739176 12739202 chr2L 12743957 12743983 Doc 6 4781 2.0 2.0 2.0 2.0 4807 chr2L 12739176 exon MRP + chr2L 12741580 intron MRP + chr2L 12743983 exon MRP + chr2L_6_12740001 chr2L_12740001 RAL-705 237 chr2L 12766760 12766775 chr2L 12766838 12766853 6 78 1.0 1.0 1.0 3.0 93 chr2L 12766760 intergenic not near genes chr2L 12766806 intergenic not near genes chr2L 12766853 intergenic not near genes chr2L_6_12765001 chr2L_12765001 RAL-705 238 chr2L 12791602 12791633 chr2L 12795276 12795308 F-element 5 3675 2.5 2.5 2.5 1.4 3706 chr2L 12791602 intergenic not near genes chr2L 12793455 intergenic not near genes chr2L 12795308 intergenic not near genes chr2L_5_12790001 chr2L_12790001 RAL-705 239 chr2L 12826598 12826624 chr2L 12826687 12826713 5 89 0.5 4.0 2.2 1.6 115 chr2L 12826598 intergenic not near genes chr2L 12826656 intergenic not near genes chr2L 12826713 intergenic not near genes chr2L_5_12825001 chr2L_12825001 RAL-705 240 chr2L 12861696 12861722 chr2L 12863163 12863189 hobo 10 1466 2.0 2.5 2.2 3.1 1493 chr2L 12861696 intergenic not near genes chr2L 12862442 intergenic not near genes chr2L 12863189 intergenic not near genes chr2L_10_12860001 chr2L_12860001 RAL-705 241 chr2L 12894028 12894053 chr2L 12895495 12895519 hobo 6 1467 4.0 1.5 2.8 1.6 1491 chr2L 12894028 intergenic not near genes chr2L 12894774 intergenic not near genes chr2L 12895519 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-705 242 chr2L 12933850 12933875 chr2L 12941317 12941341 blood 11 7467 3.5 3.0 3.2 2.6 7491 chr2L 12933850 intergenic not near genes chr2L 12937596 intergenic not near genes chr2L 12941341 intergenic not near genes chr2L_11_12935001 chr2L_12935001 RAL-705 243 chr2L 12945990 12946003 chr2L 12946070 12946082 4 80 3.0 3.5 3.2 1.0 92 chr2L 12945990 intergenic not near genes chr2L 12946036 intergenic not near genes chr2L 12946082 intergenic not near genes chr2L_4_12945001 chr2L_12945001 RAL-705 244 chr2L 12965192 12965212 chr2L 12965272 12965291 6 80 1.0 4.0 2.5 1.7 99 chr2L 12965192 intergenic not near genes chr2L 12965242 intergenic not near genes chr2L 12965291 intergenic not near genes chr2L_6_12965001 chr2L_12965001 RAL-705 245 chr2L 13147759 13147777 chr2L 13147835 13147853 9 76 3.0 3.5 3.2 2.1 94 chr2L 13147759 intergenic not near genes chr2L 13147806 intergenic not near genes chr2L 13147853 intergenic not near genes chr2L_9_13145001 chr2L_13145001 RAL-705 246 chr2L 13152227 13152247 chr2L 13152305 13152324 6 77 1.5 1.5 1.5 2.4 97 chr2L 13152227 intergenic not near genes chr2L 13152276 intergenic not near genes chr2L 13152324 intergenic not near genes chr2L_6_13150001 chr2L_13150001 RAL-705 247 chr2L 13157192 13157227 chr2L 13158549 13158584 5 1357 3.0 1.0 2.0 1.7 1392 chr2L 13157192 intergenic not near genes chr2L 13157888 intergenic not near genes chr2L 13158584 intergenic Pk34A + chr2L_5_13155001 chr2L_13155001 RAL-705 248 chr2L 13185324 13185351 chr2L 13185403 13185430 4 79 0.5 2.0 1.2 1.8 106 chr2L 13185324 3` UTR CG16974 - chr2L 13185377 3` UTR CG16974 - chr2L 13185430 exon CG16974 - chr2L_4_13185001 chr2L_13185001 RAL-705 249 chr2L 13215393 13215413 chr2L 13215668 13215688 4 275 1.5 2.5 2.0 1.3 295 chr2L 13215393 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215540 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215688 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_4_13215001 chr2L_13215001 RAL-705 250 chr2L 13241958 13241972 chr2L 13244342 13244356 BS 4 2384 2.5 1.0 1.8 1.4 2398 chr2L 13241958 5` UTR CR45330 + chr2L 13243157 intron CR45330 + chr2L 13244356 5` UTR CR45330 + chr2L_4_13240001 chr2L_13240001 RAL-705 251 chr2L 13266395 13266412 chr2L 13266483 13266499 9 87 1.5 8.0 4.8 1.6 104 chr2L 13266395 intron CG44085 + chr2L 13266447 intron CG44085 + chr2L 13266499 intron CG44085 + chr2L_9_13265001 chr2L_13265001 RAL-705 252 chr2L 13405646 13405678 chr2L 13410443 13410475 Doc 14 4797 3.0 3.0 3.0 3.5 4829 chr2L 13405646 exon CG7110 + chr2L 13408060 intron CG7110 + chr2L 13410475 intron CG7110 + chr2L_14_13405001 chr2L_13405001 RAL-705 253 chr2L 13449462 13449492 chr2L 13456897 13456928 Quasimodo 6 7436 0.5 1.0 0.8 3.3 7466 chr2L 13449462 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453195 intron CG42784 + chr2L 13456928 intron CG42784 + chr2L_6_13450001 chr2L_13450001 RAL-705 254 chr2L 13481454 13481475 chr2L 13482061 13482082 jockey 8 607 4.0 7.0 5.5 1.2 628 chr2L 13481454 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482082 intron CG42784 + chr2L_8_13480001 chr2L_13480001 RAL-705 255 chr2L 13493329 13493358 chr2L 13493612 13493639 5 282 2.5 0.5 1.5 2.0 310 chr2L 13493329 intron CG42784 + chr2L 13493484 intron CG42784 + chr2L 13493639 intron CG42784 + chr2L_5_13490001 chr2L_13490001 RAL-705 256 chr2L 13522140 13522165 chr2L 13527658 13527683 Transpac 6 5518 1.0 3.0 2.0 2.0 5543 chr2L 13522140 intron B4 - chr2L 13524912 intron B4 - chr2L 13527683 intron B4 - chr2L_6_13520001 chr2L_13520001 RAL-705 257 chr2L 13537498 13537504 chr2L 13538024 13538029 4 526 2.5 2.5 2.5 1.1 531 chr2L 13537498 intron B4 - chr2L 13537764 intron B4 - chr2L 13538029 intron B4 - chr2L_4_13535001 chr2L_13535001 RAL-705 258 chr2L 13842132 13842162 chr2L 13842216 13842246 6 84 1.5 1.0 1.2 2.7 114 chr2L 13842132 intron CenG1A + chr2L 13842189 intron CenG1A + chr2L 13842246 intron CenG1A + chr2L_6_13840001 chr2L_13840001 RAL-705 259 chr2L 13853082 13853110 chr2L 13862232 13862260 roo 9 9149 3.5 2.5 3.0 2.2 9178 chr2L 13853082 intron CenG1A + chr2L 13857671 intron CenG1A + chr2L 13862260 intron CenG1A + chr2L_9_13855001 chr2L_13855001 RAL-705 260 chr2L 13944408 13944422 chr2L 13944528 13944542 7 120 0.0 1.0 0.5 4.7 134 chr2L 13944408 intron Ance-3 + chr2L 13944475 intron Ance-3 + chr2L 13944542 intron Ance-3 + chr2L_7_13940001 chr2L_13940001 RAL-705 261 chr2L 13981519 13981549 chr2L 13981610 13981640 12 91 1.5 1.5 1.5 4.8 121 chr2L 13981519 exon NimC2 + chr2L 13981580 intron NimC2 + chr2L 13981640 intron NimC2 + chr2L_12_13980001 chr2L_13980001 RAL-705 262 chr2L 14246293 14246306 chr2L 14246370 14246384 5 78 0.0 0.0 0.0 5.0 91 chr2L 14246293 intergenic not near genes chr2L 14246338 intergenic not near genes chr2L 14246384 intergenic not near genes chr2L_5_14245001 chr2L_14245001 RAL-705 263 chr2L 14557260 14557274 chr2L 14557356 14557370 7 96 2.5 4.0 3.2 1.7 110 chr2L 14557260 intergenic not near genes chr2L 14557315 intergenic not near genes chr2L 14557370 intergenic not near genes chr2L_7_14555001 chr2L_14555001 RAL-705 264 chr2L 14642570 14642602 chr2L 14651733 14651765 roo 9 9163 2.0 0.5 1.2 4.1 9195 chr2L 14642570 intron osp - chr2L 14647168 intron osp - chr2L 14651765 intron osp - chr2L_9_14645001 chr2L_14645001 RAL-705 265 chr2L 14658926 14658954 chr2L 14659009 14659037 8 82 0.0 1.0 0.5 5.3 111 chr2L 14658926 intron osp - chr2L 14658982 intron osp - chr2L 14659037 intron osp - chr2L_8_14655001 chr2L_14655001 RAL-705 266 chr2L 14707206 14707238 chr2L 14707325 14707357 15 119 2.5 3.0 2.8 3.9 151 chr2L 14707206 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707357 intergenic not near genes chr2L_15_14705001 chr2L_14705001 RAL-705 267 chr2L 14707589 14707620 chr2L 14708591 14708625 6 1004 6.5 13.0 9.8 0.6 1036 chr2L 14707589 intergenic not near genes chr2L 14708107 intergenic not near genes chr2L 14708625 intergenic not near genes chr2L_6_14705001 chr2L_14705001 RAL-705 268 chr2L 14706734 14706766 chr2L 14708996 14709028 12 2262 27.0 22.0 24.5 0.5 2294 chr2L 14706734 intergenic not near genes chr2L 14707881 intergenic not near genes chr2L 14709028 intergenic not near genes chr2L_12_14705001 chr2L_14705001 RAL-705 269 chr2L 14715539 14715563 chr2L 14715630 14715654 6 91 3.0 2.5 2.8 1.6 115 chr2L 14715539 intergenic not near genes chr2L 14715596 intergenic not near genes chr2L 14715654 intergenic not near genes chr2L_6_14715001 chr2L_14715001 RAL-705 270 chr2L 14720233 14720263 chr2L 14720412 14720440 7 179 5.0 1.5 3.2 1.7 207 chr2L 14720233 intergenic not near genes chr2L 14720336 intergenic not near genes chr2L 14720440 intergenic not near genes chr2L_7_14720001 chr2L_14720001 RAL-705 271 chr2L 14778814 14778840 chr2L 14779102 14779126 5 288 1.5 5.5 3.5 1.1 312 chr2L 14778814 intergenic not near genes chr2L 14778970 intergenic not near genes chr2L 14779126 intergenic not near genes chr2L_5_14775001 chr2L_14775001 RAL-705 272 chr2L 14840977 14841009 chr2L 14841064 14841096 10 87 0.0 1.0 0.5 6.7 119 chr2L 14840977 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841096 3` UTR CR43805 - chr2L_10_14840001 chr2L_14840001 RAL-705 273 chr2L 14889956 14889987 chr2L 14890381 14890412 jockey 11 425 2.5 1.0 1.8 3.9 456 chr2L 14889956 intergenic not near genes chr2L 14890184 intergenic not near genes chr2L 14890412 intergenic not near genes chr2L_11_14890001 chr2L_14890001 RAL-705 274 chr2L 14984384 14984394 chr2L 14991986 14991996 opus 7 7601 1.5 1.5 1.5 2.8 7612 chr2L 14984384 intron mol - chr2L 14988190 intron mol - chr2L 14991996 intron mol - chr2L_7_14985001 chr2L_14985001 RAL-705 275 chr2L 15021439 15021448 chr2L 15021515 15021523 4 76 7.0 2.0 4.5 0.7 84 chr2L 15021439 intron GABA-B-R1 + chr2L 15021481 intron GABA-B-R1 + chr2L 15021523 intron GABA-B-R1 + chr2L_4_15020001 chr2L_15020001 RAL-705 276 chr2L 15080900 15080934 chr2L 15080993 15081031 4 94 2.0 0.0 1.0 2.0 131 chr2L 15080900 intron CG15270 + chr2L 15080966 intron CG15270 + chr2L 15081031 intron CG15270 + chr2L_4_15080001 chr2L_15080001 RAL-705 277 chr2L 15125598 15125619 chr2L 15125678 15125699 4 80 2.0 3.0 2.5 1.1 101 chr2L 15125598 intergenic not near genes chr2L 15125648 intergenic not near genes chr2L 15125699 intergenic not near genes chr2L_4_15125001 chr2L_15125001 RAL-705 278 chr2L 15135264 15135288 chr2L 15135354 15135379 7 90 2.0 2.0 2.0 2.3 115 chr2L 15135264 intergenic not near genes chr2L 15135322 intergenic not near genes chr2L 15135379 intergenic not near genes chr2L_7_15135001 chr2L_15135001 RAL-705 279 chr2L 15226369 15226392 chr2L 15226444 15226468 4 75 2.5 2.5 2.5 1.1 99 chr2L 15226369 intergenic not near genes chr2L 15226418 intergenic not near genes chr2L 15226468 intergenic not near genes chr2L_4_15225001 chr2L_15225001 RAL-705 280 chr2L 15252983 15253008 chr2L 15253061 15253087 9 79 1.5 2.5 2.0 3.0 104 chr2L 15252983 intron dao + chr2L 15253035 intron dao + chr2L 15253087 intron dao + chr2L_9_15250001 chr2L_15250001 RAL-705 281 chr2L 15309361 15309381 chr2L 15309464 15309484 7 103 4.0 1.5 2.8 1.8 123 chr2L 15309361 intergenic not near genes chr2L 15309422 intergenic not near genes chr2L 15309484 intergenic not near genes chr2L_7_15305001 chr2L_15305001 RAL-705 282 chr2L 15576689 15576694 chr2L 15576769 15576774 5 80 5.0 3.0 4.0 1.0 85 chr2L 15576689 intron kek3 + chr2L 15576732 intron kek3 + chr2L 15576774 intron kek3 + chr2L_5_15575001 chr2L_15575001 RAL-705 283 chr2L 15586417 15586423 chr2L 15593469 15593475 297 4 7052 2.5 4.5 3.5 0.9 7058 chr2L 15586417 intergenic not near genes chr2L 15589946 intergenic not near genes chr2L 15593475 intergenic not near genes chr2L_4_15585001 chr2L_15585001 RAL-705 284 chr2L 15731232 15731265 chr2L 15731309 15731341 10 77 2.0 2.0 2.0 3.3 109 chr2L 15731232 intron CycE - chr2L 15731286 intron CycE - chr2L 15731341 intron CycE - chr2L_10_15730001 chr2L_15730001 RAL-705 285 chr2L 15736976 15737002 chr2L 15737058 15737087 10 84 1.0 1.0 1.0 5.0 111 chr2L 15736976 intron CycE - chr2L 15737032 intron CycE - chr2L 15737087 intron CycE - chr2L_10_15735001 chr2L_15735001 RAL-705 286 chr2L 15775867 15775892 chr2L 15776341 15776366 8 474 2.5 2.0 2.2 2.5 499 chr2L 15775867 intergenic not near genes chr2L 15776116 intergenic CG43760 - chr2L 15776366 intergenic CG43760 - chr2L_8_15775001 chr2L_15775001 RAL-705 287 chr2L 15776554 15776578 chr2L 15776992 15777016 5 438 14.5 15.5 15.0 0.3 462 chr2L 15776554 exon CG43760 - chr2L 15776785 5` UTR CG43760 - chr2L 15777016 intergenic CG43760 - chr2L_5_15775001 chr2L_15775001 RAL-705 288 chr2L 15956028 15956056 chr2L 15957495 15957523 hobo 5 1467 1.5 4.0 2.8 1.3 1495 chr2L 15956028 intron beat-Ib - chr2L 15956776 intron beat-Ib - chr2L 15957523 intron beat-Ib - chr2L_5_15955001 chr2L_15955001 RAL-705 289 chr2L 16001465 16001492 chr2L 16001553 16001580 6 88 0.0 2.0 1.0 3.0 115 chr2L 16001465 intron beat-Ic + chr2L 16001522 intron beat-Ic + chr2L 16001580 intron beat-Ic + chr2L_6_16000001 chr2L_16000001 RAL-705 290 chr2L 16027397 16027426 chr2L 16027472 16027501 4 76 2.5 1.5 2.0 1.3 104 chr2L 16027397 intron beat-Ic + chr2L 16027449 intron beat-Ic + chr2L 16027501 intron beat-Ic + chr2L_4_16025001 chr2L_16025001 RAL-705 291 chr2L 16058128 16058133 chr2L 16058269 16058274 4 141 2.5 1.0 1.8 1.4 146 chr2L 16058128 intron beat-Ia + chr2L 16058201 intron beat-Ia + chr2L 16058274 intron beat-Ia + chr2L_4_16055001 chr2L_16055001 RAL-705 292 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 13 145889 14.5 13.5 14.0 0.9 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_16140001 chr2L_16140001 RAL-705 293 chr2L 16115526 16115553 chr2L 16115602 16115629 4 76 3.5 2.5 3.0 1.0 103 chr2L 16115526 intergenic not near genes chr2L 16115578 intergenic not near genes chr2L 16115629 intergenic not near genes chr2L_4_16115001 chr2L_16115001 RAL-705 294 chr2L 16122153 16122176 chr2L 16122510 16122533 6 356 0.5 1.5 1.0 3.0 380 chr2L 16122153 intergenic not near genes chr2L 16122343 intergenic not near genes chr2L 16122533 intergenic not near genes chr2L_6_16120001 chr2L_16120001 RAL-705 295 chr2L 16141173 16141192 chr2L 16146380 16146399 copia 7 5207 3.5 4.5 4.0 1.4 5226 chr2L 16141173 intergenic not near genes chr2L 16143786 intergenic not near genes chr2L 16146399 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-705 296 chr2L 16147203 16147211 chr2L 16147281 16147289 6 78 0.0 5.0 2.5 1.7 86 chr2L 16147203 intergenic not near genes chr2L 16147246 intergenic not near genes chr2L 16147289 intergenic not near genes chr2L_6_16145001 chr2L_16145001 RAL-705 297 chr2L 9084336 9084340 chr2L 16217660 16217660 12 7133321 11.0 13.5 12.2 0.9 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_12_12650001 chr2L_12650001 RAL-705 298 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 14.5 13.5 14.0 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-705 299 chr2L 16217660 16217660 chr2L 18622718 18622719 7 2405059 12.5 14.5 13.5 0.5 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_7_17420001 chr2L_17420001 RAL-705 300 chr2L 16243693 16243857 chr2L 16243776 16243952 7 92 0.5 1.0 0.8 3.9 259 chr2L 16243693 exon CG42818 + chr2L 16243822 exon CG42818 + chr2L 16243952 exon CG42818 + chr2L_7_16240001 chr2L_16240001 RAL-705 301 chr2L 16280253 16280281 chr2L 16281423 16281452 1360 6 1170 1.0 1.5 1.2 2.7 1199 chr2L 16280253 intron crp - chr2L 16280852 intron crp - chr2L 16281452 intron crp - chr2L_6_16280001 chr2L_16280001 RAL-705 302 chr2L 16420569 16420595 chr2L 16420690 16420716 13 121 1.5 3.0 2.2 4.1 147 chr2L 16420569 intron CG5888 - chr2L 16420642 intron CG5888 - chr2L 16420716 intron CG5888 - chr2L_13_16420001 chr2L_16420001 RAL-705 303 chr2L 16600237 16600253 chr2L 16600358 16600375 6 121 1.5 3.5 2.5 1.7 138 chr2L 16600237 intron CG42389 + chr2L 16600306 intron CG42389 + chr2L 16600375 intron CG42389 + chr2L_6_16600001 chr2L_16600001 RAL-705 304 chr2L 16695128 16695146 chr2L 16695211 16695229 7 83 4.5 4.5 4.5 1.3 101 chr2L 16695128 intron grp + chr2L 16695178 intron grp + chr2L 16695229 intron grp + chr2L_7_16695001 chr2L_16695001 RAL-705 305 chr2L 16701453 16701485 chr2L 16701532 16701564 4 79 2.5 2.0 2.2 1.2 111 chr2L 16701453 intergenic not near genes chr2L 16701508 intergenic not near genes chr2L 16701564 intergenic not near genes chr2L_4_16700001 chr2L_16700001 RAL-705 306 chr2L 16703865 16703893 chr2L 16703948 16703976 9 83 2.0 1.0 1.5 3.6 111 chr2L 16703865 intergenic CG31808 - chr2L 16703920 intergenic CG31808 - chr2L 16703976 intergenic CG31808 - chr2L_9_16700001 chr2L_16700001 RAL-705 307 chr2L 16728924 16728955 chr2L 16729559 16729590 5 635 1.0 2.0 1.5 2.0 666 chr2L 16728924 intergenic not near genes chr2L 16729257 intergenic not near genes chr2L 16729590 intergenic CG31812 + chr2L_5_16725001 chr2L_16725001 RAL-705 308 chr2L 16939994 16940012 chr2L 16940072 16940090 7 78 0.0 3.5 1.8 2.5 96 chr2L 16939994 intergenic not near genes chr2L 16940042 intergenic not near genes chr2L 16940090 intergenic not near genes chr2L_7_16940001 chr2L_16940001 RAL-705 309 chr2L 16949615 16949639 chr2L 16949699 16949723 4 84 1.0 0.5 0.8 2.2 108 chr2L 16949615 intron CR44393 - chr2L 16949669 intron CR44393 - chr2L 16949723 intron CR44393 - chr2L_4_16945001 chr2L_16945001 RAL-705 310 chr2L 16958106 16958133 chr2L 16962894 16962921 Doc 6 4788 0.5 2.5 1.5 2.4 4815 chr2L 16958106 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962921 intergenic not near genes chr2L_6_16960001 chr2L_16960001 RAL-705 311 chr2L 16968243 16968267 chr2L 16968333 16968357 6 89 0.5 3.0 1.8 2.1 114 chr2L 16968243 intergenic not near genes chr2L 16968300 intergenic not near genes chr2L 16968357 intergenic not near genes chr2L_6_16965001 chr2L_16965001 RAL-705 312 chr2L 16987561 16987573 chr2L 16987637 16987649 4 76 1.5 1.5 1.5 1.6 88 chr2L 16987561 intron beat-IIIb + chr2L 16987605 intron beat-IIIb + chr2L 16987649 intron beat-IIIb + chr2L_4_16985001 chr2L_16985001 RAL-705 313 chr2L 17000121 17000148 chr2L 17000243 17000270 6 122 3.5 1.5 2.5 1.7 149 chr2L 17000121 intergenic not near genes chr2L 17000196 intergenic not near genes chr2L 17000270 intergenic not near genes chr2L_6_17000001 chr2L_17000001 RAL-705 314 chr2L 17018304 17018323 chr2L 17018393 17018412 13 89 3.0 3.0 3.0 3.2 108 chr2L 17018304 intergenic CR45462 - chr2L 17018358 intergenic CR45462 - chr2L 17018412 intergenic CR45462 - chr2L_13_17015001 chr2L_17015001 RAL-705 315 chr2L 17032501 17032516 chr2L 17032586 17032601 5 85 3.5 1.5 2.5 1.4 100 chr2L 17032501 intergenic not near genes chr2L 17032551 intergenic not near genes chr2L 17032601 intergenic not near genes chr2L_5_17030001 chr2L_17030001 RAL-705 316 chr2L 17056677 17056698 chr2L 17056777 17056798 5 100 2.0 1.5 1.8 1.8 121 chr2L 17056677 intergenic not near genes chr2L 17056738 intergenic not near genes chr2L 17056798 intergenic not near genes chr2L_5_17055001 chr2L_17055001 RAL-705 317 chr2L 17070212 17070217 chr2L 17070307 17070313 4 96 1.0 3.0 2.0 1.3 101 chr2L 17070212 intergenic not near genes chr2L 17070262 intergenic not near genes chr2L 17070313 intergenic not near genes chr2L_4_17070001 chr2L_17070001 RAL-705 318 chr2L 17111837 17111867 chr2L 17111935 17111965 6 98 2.0 1.0 1.5 2.4 128 chr2L 17111837 intergenic not near genes chr2L 17111901 intergenic not near genes chr2L 17111965 intergenic not near genes chr2L_6_17110001 chr2L_17110001 RAL-705 319 chr2L 17120841 17120875 chr2L 17120920 17120954 5 79 1.5 2.5 2.0 1.7 113 chr2L 17120841 intergenic not near genes chr2L 17120898 intergenic not near genes chr2L 17120954 intergenic not near genes chr2L_5_17120001 chr2L_17120001 RAL-705 320 chr2L 17158726 17158750 chr2L 17158829 17158853 4 103 0.5 1.5 1.0 2.0 127 chr2L 17158726 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158790 intron,intron CG34106 +,beat-IIIa + chr2L 17158853 intron,intron CG34106 +,beat-IIIa + chr2L_4_17155001 chr2L_17155001 RAL-705 321 chr2L 17173081 17173099 chr2L 17173164 17173183 6 84 1.0 2.5 1.8 2.1 102 chr2L 17173081 3` UTR,3` UTR CG34106 +,beat-IIIa + chr2L 17173132 intergenic CG34106 +,beat-IIIa +,CG34169 + chr2L 17173183 intergenic CG34106 +,beat-IIIa +,CG34169 + chr2L_6_17170001 chr2L_17170001 RAL-705 322 chr2L 17199156 17199188 chr2L 17200623 17200655 hobo 5 1467 0.5 1.0 0.8 2.8 1499 chr2L 17199156 intron beat-IIIc - chr2L 17199906 intron beat-IIIc - chr2L 17200655 intron beat-IIIc - chr2L_5_17195001 chr2L_17195001 RAL-705 323 chr2L 17204043 17204076 chr2L 17204120 17204153 4 76 1.0 1.5 1.2 1.8 110 chr2L 17204043 intron beat-IIIc - chr2L 17204098 intron beat-IIIc - chr2L 17204153 intron beat-IIIc - chr2L_4_17200001 chr2L_17200001 RAL-705 324 chr2L 17303438 17303462 chr2L 17303616 17303640 4 178 2.0 2.0 2.0 1.3 202 chr2L 17303438 intergenic not near genes chr2L 17303539 intergenic not near genes chr2L 17303640 intergenic not near genes chr2L_4_17300001 chr2L_17300001 RAL-705 325 chr2L 17360023 17360050 chr2L 17360201 17360228 7 178 2.5 0.0 1.2 3.2 205 chr2L 17360023 intergenic not near genes chr2L 17360126 intergenic not near genes chr2L 17360228 intergenic not near genes chr2L_7_17360001 chr2L_17360001 RAL-705 326 chr2L 17456809 17456831 chr2L 17456897 17456919 6 87 1.0 2.5 1.8 2.1 110 chr2L 17456809 intron,exon CG5050 +,CG18563 - chr2L 17456864 intron,exon CG5050 +,CG18563 - chr2L 17456919 intron,exon CG5050 +,CG18563 - chr2L_6_17455001 chr2L_17455001 RAL-705 327 chr2L 17466965 17466988 chr2L 17467385 17467408 5 420 2.0 4.5 3.2 1.2 443 chr2L 17466965 intron BicD - chr2L 17467186 intron BicD - chr2L 17467408 intron BicD - chr2L_5_17465001 chr2L_17465001 RAL-705 328 chr2L 17565378 17565410 chr2L 17565469 17565500 4 91 0.0 0.0 0.0 4.0 122 chr2L 17565378 intergenic not near genes chr2L 17565439 intergenic not near genes chr2L 17565500 intergenic not near genes chr2L_4_17565001 chr2L_17565001 RAL-705 329 chr2L 17592803 17592821 chr2L 17592895 17592913 4 92 1.0 3.0 2.0 1.3 110 chr2L 17592803 intron Sytalpha + chr2L 17592858 intron Sytalpha + chr2L 17592913 intron Sytalpha + chr2L_4_17590001 chr2L_17590001 RAL-705 330 chr2L 17703654 17703680 chr2L 17703741 17703771 12 90 3.5 0.5 2.0 4.0 117 chr2L 17703654 intron CadN - chr2L 17703712 intron CadN - chr2L 17703771 intron CadN - chr2L_12_17700001 chr2L_17700001 RAL-705 331 chr2L 17819926 17819951 chr2L 17825129 17825153 copia 6 5202 2.0 1.5 1.8 2.1 5227 chr2L 17819926 intron CadN2 - chr2L 17822540 intron CadN2 - chr2L 17825153 intron CadN2 - chr2L_6_17820001 chr2L_17820001 RAL-705 332 chr2L 17906756 17906776 chr2L 17906839 17906859 5 83 3.5 2.0 2.8 1.3 103 chr2L 17906756 intergenic not near genes chr2L 17906808 intergenic not near genes chr2L 17906859 intergenic not near genes chr2L_5_17905001 chr2L_17905001 RAL-705 333 chr2L 17911962 17911989 chr2L 17914139 17914167 pogo 5 2178 1.5 2.5 2.0 1.7 2205 chr2L 17911962 intergenic not near genes chr2L 17913064 intergenic not near genes chr2L 17914167 intergenic CG43271 - chr2L_5_17910001 chr2L_17910001 RAL-705 334 chr2L 17938856 17938877 chr2L 17938947 17938968 5 91 1.0 3.0 2.0 1.7 112 chr2L 17938856 intergenic CR44399 - chr2L 17938912 intergenic CR44399 - chr2L 17938968 intergenic CR44399 - chr2L_5_17935001 chr2L_17935001 RAL-705 335 chr2L 17951943 17951970 chr2L 17953410 17953437 hobo 15 1467 4.0 3.0 3.5 3.3 1494 chr2L 17951943 intergenic CR44398 -,CR44397 - chr2L 17952690 intergenic not near genes chr2L 17953437 intergenic not near genes chr2L_15_17950001 chr2L_17950001 RAL-705 336 chr2L 18047032 18047060 chr2L 18047114 18047142 8 82 1.0 1.5 1.2 3.6 110 chr2L 18047032 intron rdo + chr2L 18047087 intron rdo + chr2L 18047142 intron rdo + chr2L_8_18045001 chr2L_18045001 RAL-705 337 chr2L 18051877 18051909 chr2L 18061024 18061055 roo 7 9147 2.0 2.5 2.2 2.2 9178 chr2L 18051877 intron rdo + chr2L 18056466 intron rdo + chr2L 18061055 intron rdo + chr2L_7_18055001 chr2L_18055001 RAL-705 338 chr2L 18169900 18169919 chr2L 18169978 18169996 4 78 3.0 2.5 2.8 1.1 96 chr2L 18169900 intron CG42750 - chr2L 18169948 intron CG42750 - chr2L 18169996 intron CG42750 - chr2L_4_18165001 chr2L_18165001 RAL-705 339 chr2L 18201783 18201818 chr2L 18201874 18201907 9 91 1.0 1.0 1.0 4.5 124 chr2L 18201783 intron CG42750 - chr2L 18201845 intron CG42750 - chr2L 18201907 intron CG42750 - chr2L_9_18200001 chr2L_18200001 RAL-705 340 chr2L 18315255 18315282 chr2L 18315335 18315359 12 80 1.5 2.0 1.8 4.3 104 chr2L 18315255 intergenic not near genes chr2L 18315307 intergenic not near genes chr2L 18315359 intergenic not near genes chr2L_12_18315001 chr2L_18315001 RAL-705 341 chr2L 18393992 18394008 chr2L 18394072 18394088 5 80 3.5 4.5 4.0 1.0 96 chr2L 18393992 intergenic not near genes chr2L 18394040 intergenic not near genes chr2L 18394088 intergenic not near genes chr2L_5_18390001 chr2L_18390001 RAL-705 342 chr2L 18408027 18408032 chr2L 18412811 18412816 Doc 4 4783 6.5 0.0 3.2 1.0 4789 chr2L 18408027 intergenic not near genes chr2L 18410422 intergenic not near genes chr2L 18412816 intergenic not near genes chr2L_4_18410001 chr2L_18410001 RAL-705 343 chr2L 16217660 16217660 chr2L 18622718 18622719 13 2405058 12.5 14.5 13.5 0.9 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_13_17420001 chr2L_17420001 RAL-705 344 chr2L 18628086 18628110 chr2L 18628287 18628311 4 201 0.0 1.0 0.5 2.7 225 chr2L 18628086 intron MESR3 + chr2L 18628198 intron MESR3 + chr2L 18628311 intron MESR3 + chr2L_4_18625001 chr2L_18625001 RAL-705 345 chr2L 18811669 18811688 chr2L 18811878 18811897 7 209 4.0 3.5 3.8 1.5 228 chr2L 18811669 intergenic not near genes chr2L 18811783 intergenic not near genes chr2L 18811897 intergenic not near genes chr2L_7_18810001 chr2L_18810001 RAL-705 346 chr2L 18959358 18959389 chr2L 18959458 18959489 7 100 3.5 2.0 2.8 1.8 131 chr2L 18959358 exon Nak - chr2L 18959424 exon Nak - chr2L 18959489 exon Nak - chr2L_7_18955001 chr2L_18955001 RAL-705 347 chr2L 19159038 19159067 chr2L 19159160 19159189 8 122 2.5 3.5 3.0 2.0 151 chr2L 19159038 intron,3` UTR brat +,CR44977 - chr2L 19159114 intron,3` UTR brat +,CR44977 - chr2L 19159189 intron,3` UTR brat +,CR44977 - chr2L_8_19155001 chr2L_19155001 RAL-705 348 chr2L 19237305 19237333 chr2L 19237404 19237433 8 100 3.5 2.0 2.8 2.1 128 chr2L 19237305 intergenic not near genes chr2L 19237369 intergenic not near genes chr2L 19237433 intergenic not near genes chr2L_8_19235001 chr2L_19235001 RAL-705 349 chr2L 19266175 19266207 chr2L 19266338 19266374 16 166 2.0 2.5 2.2 5.0 199 chr2L 19266175 intergenic not near genes chr2L 19266274 intergenic not near genes chr2L 19266374 intergenic not near genes chr2L_16_19265001 chr2L_19265001 RAL-705 350 chr2L 19345014 19345046 chr2L 19357221 19357247 blood 8 12208 3.0 3.5 3.2 1.9 12233 chr2L 19345014 intron dnt - chr2L 19351130 intron dnt - chr2L 19357247 intron dnt - chr2L_8_19350001 chr2L_19350001 RAL-705 351 chr2L 19357547 19357559 chr2L 19357637 19357648 9 90 7.5 6.0 6.8 1.2 101 chr2L 19357547 intron dnt - chr2L 19357598 intron dnt - chr2L 19357648 intron dnt - chr2L_9_19355001 chr2L_19355001 RAL-705 352 chr2L 19364079 19364106 chr2L 19364159 19364184 7 80 0.5 1.5 1.0 3.5 105 chr2L 19364079 intergenic CG13086 + chr2L 19364132 intergenic CG13086 + chr2L 19364184 intergenic CG13086 + chr2L_7_19360001 chr2L_19360001 RAL-705 353 chr2L 19378341 19378366 chr2L 19378424 19378449 6 83 5.5 1.0 3.2 1.4 108 chr2L 19378341 intergenic not near genes chr2L 19378395 intergenic not near genes chr2L 19378449 intergenic not near genes chr2L_6_19375001 chr2L_19375001 RAL-705 354 chr2L 19405621 19405641 chr2L 19405710 19405731 7 90 0.5 2.0 1.2 3.2 110 chr2L 19405621 intron Pax - chr2L 19405676 intron Pax - chr2L 19405731 intron Pax - chr2L_7_19405001 chr2L_19405001 RAL-705 355 chr2L 19466833 19466848 chr2L 19466912 19466926 5 79 4.0 2.0 3.0 1.2 93 chr2L 19466833 3` UTR tj + chr2L 19466880 3` UTR tj + chr2L 19466926 3` UTR tj + chr2L_5_19465001 chr2L_19465001 RAL-705 356 chr2L 19518893 19518902 chr2L 19518971 19518982 5 80 1.5 3.5 2.5 1.4 89 chr2L 19518893 5` UTR CG10132 + chr2L 19518938 5` UTR CG10132 + chr2L 19518982 5` UTR CG10132 + chr2L_5_19515001 chr2L_19515001 RAL-705 357 chr2L 19543124 19543157 chr2L 19543208 19543241 10 84 3.5 1.0 2.2 3.1 117 chr2L 19543124 intron ref(2)P + chr2L 19543182 intron ref(2)P + chr2L 19543241 intron ref(2)P + chr2L_10_19540001 chr2L_19540001 RAL-705 358 chr2L 19560005 19560035 chr2L 19560258 19560287 4 252 2.5 2.5 2.5 1.1 282 chr2L 19560005 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560287 intron Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-705 359 chr2L 19560836 19560864 chr2L 19560916 19560944 10 80 2.0 0.0 1.0 5.0 108 chr2L 19560836 intron Tep5 + chr2L 19560890 exon Tep5 + chr2L 19560944 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-705 360 chr2L 19620093 19620131 chr2L 19621081 19621118 jockey 14 988 2.0 2.0 2.0 4.7 1025 chr2L 19620093 intron Lar + chr2L 19620606 intron Lar + chr2L 19621118 intron Lar + chr2L_14_19620001 chr2L_19620001 RAL-705 361 chr2L 19652570 19652588 chr2L 19674004 19674022 opus 4 21434 3.0 2.0 2.5 1.1 21452 chr2L 19652570 intron Lar + chr2L 19663296 intron Lar + chr2L 19674022 intron Lar + chr2L_4_19660001 chr2L_19660001 RAL-705 362 chr2L 19703538 19703569 chr2L 19712674 19712705 roo 12 9136 2.0 5.0 3.5 2.7 9167 chr2L 19703538 intron Lar + chr2L 19708122 intron Lar + chr2L 19712705 intron Lar + chr2L_12_19705001 chr2L_19705001 RAL-705 363 chr2L 19737351 19737383 chr2L 19740820 19740846 1360 6 3467 0.5 1.5 1.0 3.0 3495 chr2L 19737351 intergenic Nf-YB + chr2L 19739098 intergenic not near genes chr2L 19740846 intergenic not near genes chr2L_6_19735001 chr2L_19735001 RAL-705 364 chr2L 19762813 19762838 chr2L 19763055 19763080 pogo 6 242 1.0 1.5 1.2 2.7 267 chr2L 19762813 5` UTR fbp - chr2L 19762946 intron fbp - chr2L 19763080 intron fbp - chr2L_6_19760001 chr2L_19760001 RAL-705 365 chr2L 19837277 19837309 chr2L 19837357 19837388 11 80 1.5 3.0 2.2 3.4 111 chr2L 19837277 intron sick + chr2L 19837332 intron sick + chr2L 19837388 intron sick + chr2L_11_19835001 chr2L_19835001 RAL-705 366 chr2L 19846267 19846275 chr2L 19846348 19846356 5 81 0.0 4.5 2.2 1.6 89 chr2L 19846267 intron sick + chr2L 19846312 intron sick + chr2L 19846356 intron sick + chr2L_5_19845001 chr2L_19845001 RAL-705 367 chr2L 19901396 19901423 chr2L 19901587 19901615 6 192 1.0 1.5 1.2 2.7 219 chr2L 19901396 intron sick + chr2L 19901506 intron sick + chr2L 19901615 intron sick + chr2L_6_19900001 chr2L_19900001 RAL-705 368 chr2L 19911290 19911324 chr2L 19911378 19911412 7 88 0.5 2.5 1.5 2.8 122 chr2L 19911290 intron,3` UTR sick +,CR43097 - chr2L 19911351 intron,3` UTR sick +,CR43097 - chr2L 19911412 intron,3` UTR sick +,CR43097 - chr2L_7_19910001 chr2L_19910001 RAL-705 369 chr2L 20005874 20005905 chr2L 20010950 20010981 flea 4 5075 2.0 3.5 2.8 1.1 5107 chr2L 20005874 intron CG43861 - chr2L 20008428 intron CG43861 - chr2L 20010981 intron CG43861 - chr2L_4_20005001 chr2L_20005001 RAL-705 370 chr2L 20036534 20036560 chr2L 20036618 20036644 9 84 1.0 2.5 1.8 3.2 110 chr2L 20036534 intron sNPF + chr2L 20036589 intron sNPF + chr2L 20036644 intron sNPF + chr2L_9_20035001 chr2L_20035001 RAL-705 371 chr2L 20041429 20041463 chr2L 20041514 20041543 13 84 1.5 3.5 2.5 3.7 114 chr2L 20041429 intron sNPF + chr2L 20041486 intron sNPF + chr2L 20041543 intron sNPF + chr2L_13_20040001 chr2L_20040001 RAL-705 372 chr2L 20079514 20079548 chr2L 20079635 20079669 6 121 3.0 2.5 2.8 1.6 155 chr2L 20079514 intron,intron neb +,fok - chr2L 20079592 intron,intron neb +,fok - chr2L 20079669 intron,intron neb +,fok - chr2L_6_20075001 chr2L_20075001 RAL-705 373 chr2L 20098728 20098747 chr2L 20099011 20099031 6 284 3.0 3.0 3.0 1.5 303 chr2L 20098728 intron Kua + chr2L 20098880 intron Kua + chr2L 20099031 intron Kua + chr2L_6_20095001 chr2L_20095001 RAL-705 374 chr2L 20226260 20226288 chr2L 20226342 20226370 8 82 0.5 5.5 3.0 2.0 110 chr2L 20226260 intergenic not near genes chr2L 20226315 intergenic not near genes chr2L 20226370 intergenic not near genes chr2L_8_20225001 chr2L_20225001 RAL-705 375 chr2L 20236510 20236539 chr2L 20236585 20236615 5 76 1.0 2.5 1.8 1.8 105 chr2L 20236510 intergenic not near genes chr2L 20236562 intergenic not near genes chr2L 20236615 intergenic not near genes chr2L_5_20235001 chr2L_20235001 RAL-705 376 chr2L 20272119 20272145 chr2L 20282830 20282854 copia 6 10710 5.0 6.5 5.8 0.9 10735 chr2L 20272119 intergenic not near genes chr2L 20277486 intergenic not near genes chr2L 20282854 intergenic not near genes chr2L_6_20275001 chr2L_20275001 RAL-705 377 chr2L 20294302 20294333 chr2L 20294391 20294422 5 89 2.5 2.0 2.2 1.6 120 chr2L 20294302 intergenic CG12617 + chr2L 20294362 intergenic CG12617 + chr2L 20294422 intergenic CG12617 + chr2L_5_20290001 chr2L_20290001 RAL-705 378 chr2L 20296510 20296539 chr2L 20296591 20296620 5 81 1.0 2.5 1.8 1.8 110 chr2L 20296510 intergenic CR43414 - chr2L 20296565 intergenic CR43414 - chr2L 20296620 intergenic CR43414 - chr2L_5_20295001 chr2L_20295001 RAL-705 379 chr2L 20303162 20303183 chr2L 20310630 20310651 blood 4 7468 0.5 0.5 0.5 2.7 7489 chr2L 20303162 intergenic not near genes chr2L 20306906 intergenic not near genes chr2L 20310651 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-705 380 chr2L 20312729 20312759 chr2L 20313029 20313059 6 300 2.5 0.5 1.5 2.4 330 chr2L 20312729 intron spir + chr2L 20312894 intron spir + chr2L 20313059 intron spir + chr2L_6_20310001 chr2L_20310001 RAL-705 381 chr2L 20315709 20315735 chr2L 20315802 20315828 5 93 1.5 2.0 1.8 1.8 119 chr2L 20315709 intron spir + chr2L 20315768 intron spir + chr2L 20315828 intron spir + chr2L_5_20315001 chr2L_20315001 RAL-705 382 chr2L 20338711 20338737 chr2L 20338791 20338818 7 79 3.5 5.0 4.2 1.3 107 chr2L 20338711 intron spir + chr2L 20338764 intron spir + chr2L 20338818 intron spir + chr2L_7_20335001 chr2L_20335001 RAL-705 383 chr2L 20376189 20376216 chr2L 20377478 20377504 11 1288 17.5 13.5 15.5 0.7 1315 chr2L 20376189 intergenic not near genes chr2L 20376846 intergenic CG16798 - chr2L 20377504 exon CG16798 - chr2L_11_20375001 chr2L_20375001 RAL-705 384 chr2L 20395491 20395522 chr2L 20395671 20395702 10 180 3.0 0.0 1.5 4.0 211 chr2L 20395491 intron CG10947 - chr2L 20395596 intron CG10947 - chr2L 20395702 intron CG10947 - chr2L_10_20395001 chr2L_20395001 RAL-705 385 chr2L 20498028 20498053 chr2L 20498124 20498149 5 96 2.5 3.5 3.0 1.2 121 chr2L 20498028 intergenic not near genes chr2L 20498088 intergenic not near genes chr2L 20498149 intergenic not near genes chr2L_5_20495001 chr2L_20495001 RAL-705 386 chr2L 20498692 20498704 chr2L 20498790 20498803 5 99 3.5 3.0 3.2 1.2 111 chr2L 20498692 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498803 intergenic not near genes chr2L_5_20495001 chr2L_20495001 RAL-705 387 chr2L 20502965 20502990 chr2L 20508366 20508391 7 5401 16.0 12.0 14.0 0.5 5426 chr2L 20502965 intergenic not near genes chr2L 20505678 intergenic not near genes chr2L 20508391 intergenic not near genes chr2L_7_20505001 chr2L_20505001 RAL-705 388 chr2L 20524193 20524213 chr2L 20524275 20524295 5 82 3.5 0.0 1.8 1.8 102 chr2L 20524193 intergenic not near genes chr2L 20524244 intergenic not near genes chr2L 20524295 intergenic not near genes chr2L_5_20520001 chr2L_20520001 RAL-705 389 chr2L 20549133 20549155 chr2L 20549215 20549237 7 82 2.5 4.5 3.5 1.6 104 chr2L 20549133 intergenic not near genes chr2L 20549185 intergenic not near genes chr2L 20549237 intergenic not near genes chr2L_7_20545001 chr2L_20545001 RAL-705 390 chr2L 20553185 20553216 chr2L 20553261 20553292 5 75 3.0 4.0 3.5 1.1 107 chr2L 20553185 intergenic not near genes chr2L 20553238 intergenic not near genes chr2L 20553292 intergenic not near genes chr2L_5_20550001 chr2L_20550001 RAL-705 391 chr2L 20568665 20568684 chr2L 20569055 20569073 X-element 5 390 3.5 3.0 3.2 1.2 408 chr2L 20568665 intron CR45347 + chr2L 20568869 intron CR45347 + chr2L 20569073 intron CR45347 + chr2L_5_20565001 chr2L_20565001 RAL-705 392 chr2L 20576218 20576239 chr2L 20583687 20583707 blood 9 7468 4.0 0.5 2.2 2.8 7489 chr2L 20576218 intergenic CR45347 + chr2L 20579962 intergenic not near genes chr2L 20583707 3` UTR CR44909 - chr2L_9_20575001 chr2L_20575001 RAL-705 393 chr2L 20601785 20601802 chr2L 20601863 20601880 7 78 2.0 2.0 2.0 2.3 95 chr2L 20601785 intron CR44909 - chr2L 20601832 intron CR44909 - chr2L 20601880 intron CR44909 - chr2L_7_20600001 chr2L_20600001 RAL-705 394 chr2L 20602723 20602748 chr2L 20602810 20602836 5 88 1.0 1.0 1.0 2.5 113 chr2L 20602723 intron CR44909 - chr2L 20602780 intron CR44909 - chr2L 20602836 intron CR44909 - chr2L_5_20600001 chr2L_20600001 RAL-705 395 chr2L 20607645 20607671 chr2L 20607723 20607750 4 79 1.0 1.0 1.0 2.0 105 chr2L 20607645 intron,3` UTR CR44909 -,CR43608 - chr2L 20607698 intron,3` UTR CR44909 -,CR43608 - chr2L 20607750 intron,3` UTR CR44909 -,CR43608 - chr2L_4_20605001 chr2L_20605001 RAL-705 396 chr2L 20639525 20639531 chr2L 20639801 20639807 INE-1 4 276 1.5 5.0 3.2 1.0 282 chr2L 20639525 intergenic not near genes chr2L 20639666 intergenic CG31680 + chr2L 20639807 intergenic CG31680 + chr2L_4_20635001 chr2L_20635001 RAL-705 397 chr2L 20648180 20648185 chr2L 20648358 20648363 4 178 19.0 3.0 11.0 0.3 183 chr2L 20648180 intron Uhg3 + chr2L 20648272 5` UTR Uhg3 + chr2L 20648363 5` UTR Uhg3 + chr2L_4_20645001 chr2L_20645001 RAL-705 398 chr2L 20862584 20862594 chr2L 20862680 20862691 4 97 0.0 4.5 2.2 1.2 107 chr2L 20862584 intergenic not near genes chr2L 20862638 intergenic not near genes chr2L 20862691 intergenic not near genes chr2L_4_20860001 chr2L_20860001 RAL-705 399 chr2L 20934604 20934636 chr2L 20934799 20934830 13 195 2.5 3.0 2.8 3.4 226 chr2L 20934604 intergenic CG9270 - chr2L 20934717 intergenic not near genes chr2L 20934830 intergenic not near genes chr2L_13_20930001 chr2L_20930001 RAL-705 400 chr2L 20967087 20967106 chr2L 20967173 20967192 7 86 3.0 3.5 3.2 1.7 105 chr2L 20967087 3` UTR CG42238 - chr2L 20967140 3` UTR CG42238 - chr2L 20967192 3` UTR CG42238 - chr2L_7_20965001 chr2L_20965001 RAL-705 401 chr2L 20976641 20976675 chr2L 20981456 20981490 X-element 7 4815 1.0 3.5 2.2 2.2 4849 chr2L 20976641 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981490 intron CG42238 - chr2L_7_20975001 chr2L_20975001 RAL-705 402 chr2L 20982266 20982286 chr2L 20982359 20982379 7 93 4.5 3.5 4.0 1.4 113 chr2L 20982266 intron CG42238 - chr2L 20982322 intron CG42238 - chr2L 20982379 intron CG42238 - chr2L_7_20980001 chr2L_20980001 RAL-705 403 chr2L 21020271 21020303 chr2L 21023948 21023980 NOF 8 3677 1.5 3.5 2.5 2.3 3709 chr2L 21020271 intron CG42238 - chr2L 21022126 intron CG42238 - chr2L 21023980 intron CG42238 - chr2L_8_21020001 chr2L_21020001 RAL-705 404 chr2L 21041134 21041168 chr2L 21049395 21049429 Tirant 8 8261 1.5 2.5 2.0 2.7 8295 chr2L 21041134 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049429 intron CG42238 - chr2L_8_21045001 chr2L_21045001 RAL-705 405 chr2L 21074917 21074950 chr2L 21075008 21075041 6 91 1.5 1.0 1.2 2.7 124 chr2L 21074917 intergenic tadr + chr2L 21074979 intergenic tadr + chr2L 21075041 intergenic tadr + chr2L_6_21070001 chr2L_21070001 RAL-705 406 chr2L 21113694 21113713 chr2L 21113787 21113805 8 92 3.0 3.0 3.0 2.0 111 chr2L 21113694 intron Nhe2 + chr2L 21113750 intron Nhe2 + chr2L 21113805 intron Nhe2 + chr2L_8_21110001 chr2L_21110001 RAL-705 407 chr2L 21169843 21169874 chr2L 21169925 21169956 5 82 1.0 1.0 1.0 2.5 113 chr2L 21169843 intron Acon + chr2L 21169900 intron Acon + chr2L 21169956 intron Acon + chr2L_5_21165001 chr2L_21165001 RAL-705 408 chr2L 21286609 21286633 chr2L 21286687 21286711 7 78 2.0 3.0 2.5 2.0 102 chr2L 21286609 exon Mio - chr2L 21286660 intron Mio - chr2L 21286711 intron Mio - chr2L_7_21285001 chr2L_21285001 RAL-705 409 chr2L 21315797 21315820 chr2L 21315875 21315897 4 78 2.0 1.5 1.8 1.4 100 chr2L 21315797 intron crc + chr2L 21315847 intron crc + chr2L 21315897 intron crc + chr2L_4_21315001 chr2L_21315001 RAL-705 410 chr2L 21355612 21355634 chr2L 21355757 21355779 4 145 2.5 2.0 2.2 1.2 167 chr2L 21355612 intron Tsp39D + chr2L 21355696 intron Tsp39D + chr2L 21355779 intron Tsp39D + chr2L_4_21355001 chr2L_21355001 RAL-705 411 chr2L 21769950 21769986 chr2L 21770031 21770067 12 81 2.0 2.5 2.2 3.8 117 chr2L 21769950 intron CG31612 - chr2L 21770008 intron CG31612 - chr2L 21770067 intron CG31612 - chr2L_12_21770001 chr2L_21770001 RAL-705 412 chr2L 21819329 21819358 chr2L 21819417 21819446 8 88 3.0 3.5 3.2 1.9 117 chr2L 21819329 intergenic CR44786 + chr2L 21819388 intergenic CR44786 + chr2L 21819446 intergenic CR44786 + chr2L_8_21815001 chr2L_21815001 RAL-705 413 chr2L 21845194 21845224 chr2L 21845270 21845301 5 77 1.0 3.0 2.0 1.7 107 chr2L 21845194 intergenic not near genes chr2L 21845248 intergenic not near genes chr2L 21845301 intergenic not near genes chr2L_5_21845001 chr2L_21845001 RAL-705 414 chr2L 21981692 21981712 chr2L 21990857 21990877 roo 6 9165 2.5 2.5 2.5 1.7 9185 chr2L 21981692 exon CG2528 - chr2L 21986284 intron CG2528 - chr2L 21990877 exon CG2528 - chr2L_6_21985001 chr2L_21985001 RAL-705 415 chr2L 22148570 22148585 chr2L 22148647 22148662 6 77 2.0 1.5 1.8 2.1 92 chr2L 22148570 intron CG42748 + chr2L 22148616 intron CG42748 + chr2L 22148662 intron CG42748 + chr2L_6_22145001 chr2L_22145001 RAL-705 416 chr2L 22199015 22199048 chr2L 22199104 22199138 5 90 0.5 4.0 2.2 1.6 123 chr2L 22199015 intron Ir40a - chr2L 22199076 intron Ir40a - chr2L 22199138 intron Ir40a - chr2L_5_22195001 chr2L_22195001 RAL-705 417 chr2L 22212137 22212162 chr2L 22212684 22212709 6 547 1.5 2.5 2.0 2.0 572 chr2L 22212137 intron Ir40a - chr2L 22212423 intron Ir40a - chr2L 22212709 intron Ir40a - chr2L_6_22210001 chr2L_22210001 RAL-705 418 chr2L 22545981 22546005 chr2L 22546077 22546101 8 96 2.0 4.0 3.0 2.0 120 chr2L 22545981 intron CG17490 + chr2L 22546041 intron CG17490 + chr2L 22546101 intron CG17490 + chr2L_8_22545001 chr2L_22545001 RAL-705 419 chr2L 22548924 22548942 chr2L 22550148 22550167 1360 10 1225 0.0 5.0 2.5 2.9 1243 chr2L 22548924 intergenic CG17490 + chr2L 22549546 intergenic not near genes chr2L 22550167 intergenic CG17493 + chr2L_10_22545001 chr2L_22545001 RAL-705 420 chr2L 22581980 22581993 chr2L 22583769 22583782 S-element 5 1789 1.0 1.0 1.0 2.5 1802 chr2L 22581980 intron CG17494 + chr2L 22582881 intron CG17494 + chr2L 22583782 intron CG17494 + chr2L_5_22580001 chr2L_22580001 RAL-705 421 chr2L 22679801 22679832 chr2L 22684573 22684604 F-element 10 4772 1.0 3.5 2.2 3.1 4803 chr2L 22679801 intron CG40006 - chr2L 22682202 intron CG40006 - chr2L 22684604 intron CG40006 - chr2L_10_22680001 chr2L_22680001 RAL-705 422 chr2L 22693926 22693949 chr2L 22694012 22694034 8 86 1.0 4.5 2.8 2.1 108 chr2L 22693926 intron CG40006 - chr2L 22693980 intron CG40006 - chr2L 22694034 intron CG40006 - chr2L_8_22690001 chr2L_22690001 RAL-705 423 chr2L 22776425 22776447 chr2L 22778214 22778236 S-element 5 1789 1.0 1.5 1.2 2.3 1811 chr2L 22776425 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778236 intergenic not near genes chr2L_5_22775001 chr2L_22775001 RAL-705 424 chr2L 22983942 22983970 chr2L 22984017 22984045 8 76 1.5 2.0 1.8 2.9 103 chr2L 22983942 intron cta + chr2L 22983994 intron cta + chr2L 22984045 intron cta + chr2L_8_22980001 chr2L_22980001 RAL-705 425 chr2R 529327 529357 chr2R 537952 537980 Max-element 16 8625 5.5 4.0 4.8 2.8 8653 chr2R 529327 intron CG40378 + chr2R 533654 intron CG40378 + chr2R 537980 intron CG40378 + chr2R_16_530001 chr2R_530001 RAL-705 426 chr2R 552756 552781 chr2R 553974 553999 1360 6 1217 2.5 1.5 2.0 2.0 1243 chr2R 552756 intron CG40378 + chr2R 553378 intron CG40378 + chr2R 553999 intron CG40378 + chr2R_6_550001 chr2R_550001 RAL-705 427 chr2R 2015135 2015165 chr2R 2015212 2015242 8 77 0.5 1.5 1.0 4.0 107 chr2R 2015135 intron CG17684 - chr2R 2015188 intron CG17684 - chr2R 2015242 intron CG17684 - chr2R_8_2015001 chr2R_2015001 RAL-705 428 chr2R 2508314 2508329 chr2R 2508451 2508467 4 137 3.5 3.5 3.5 0.9 153 chr2R 2508314 intron MFS17 - chr2R 2508390 intron MFS17 - chr2R 2508467 intron MFS17 - chr2R_4_2505001 chr2R_2505001 RAL-705 429 chr2R 2793983 2794012 chr2R 2794107 2794135 11 124 2.0 3.0 2.5 3.1 152 chr2R 2793983 intron CG41378 - chr2R 2794059 intron CG41378 - chr2R 2794135 intron CG41378 - chr2R_11_2790001 chr2R_2790001 RAL-705 430 chr2R 3130231 3130259 chr2R 3130318 3130346 10 87 1.5 4.0 2.8 2.6 115 chr2R 3130231 intron CG42596 + chr2R 3130288 intron CG42596 + chr2R 3130346 intron CG42596 + chr2R_10_3130001 chr2R_3130001 RAL-705 431 chr2R 3293754 3293766 chr2R 3293832 3293844 4 78 3.0 1.0 2.0 1.3 90 chr2R 3293754 intergenic not near genes chr2R 3293799 intergenic not near genes chr2R 3293844 intergenic not near genes chr2R_4_3290001 chr2R_3290001 RAL-705 432 chr2R 3583059 3583091 chr2R 3583135 3583167 5 75 1.0 1.0 1.0 2.5 108 chr2R 3583059 intergenic not near genes chr2R 3583113 intergenic not near genes chr2R 3583167 intergenic not near genes chr2R_5_3580001 chr2R_3580001 RAL-705 433 chr2R 4015323 4015349 chr2R 4015496 4015522 6 173 0.5 1.0 0.8 3.3 199 chr2R 4015323 intron Haspin + chr2R 4015422 intron Haspin + chr2R 4015522 intron Haspin + chr2R_6_4015001 chr2R_4015001 RAL-705 434 chr2R 4387295 4387309 chr2R 4387446 4387459 4 151 3.0 0.0 1.5 1.6 164 chr2R 4387295 intron Gprk1 - chr2R 4387377 intron Gprk1 - chr2R 4387459 intron Gprk1 - chr2R_4_4385001 chr2R_4385001 RAL-705 435 chr2R 4621317 4621345 chr2R 4621857 4621885 8 540 0.5 2.5 1.5 3.2 568 chr2R 4621317 3` UTR CR44101 - chr2R 4621601 3` UTR CR44101 - chr2R 4621885 3` UTR CR44101 - chr2R_8_4620001 chr2R_4620001 RAL-705 436 chr2R 4622955 4622976 chr2R 4624112 4624134 1360 5 1158 2.0 1.5 1.8 1.8 1179 chr2R 4622955 intergenic CR44101 - chr2R 4623544 intergenic not near genes chr2R 4624134 intergenic not near genes chr2R_5_4620001 chr2R_4620001 RAL-705 437 chr2R 5062775 5062804 chr2R 5062869 5062896 11 94 5.0 6.0 5.5 1.7 121 chr2R 5062775 intergenic not near genes chr2R 5062836 intergenic not near genes chr2R 5062896 intergenic not near genes chr2R_11_5060001 chr2R_5060001 RAL-705 438 chr2R 5209781 5209812 chr2R 5210314 5210345 6 533 4.5 3.5 4.0 1.2 564 chr2R 5209781 intron Nipped-A - chr2R 5210063 intron Nipped-A - chr2R 5210345 intron Nipped-A - chr2R_6_5210001 chr2R_5210001 RAL-705 439 chr2R 5363493 5363518 chr2R 5363569 5363596 8 78 1.5 4.0 2.8 2.1 103 chr2R 5363493 5` UTR CR42646 + chr2R 5363544 intron CR42646 + chr2R 5363596 intron CR42646 + chr2R_8_5360001 chr2R_5360001 RAL-705 440 chr2R 5396262 5396282 chr2R 5396500 5396519 5 238 11.0 15.5 13.2 0.4 257 chr2R 5396262 intergenic not near genes chr2R 5396390 intergenic not near genes chr2R 5396519 intergenic not near genes chr2R_5_5395001 chr2R_5395001 RAL-705 441 chr2R 5417992 5418027 chr2R 5420624 5420659 Burdock 6 2632 2.0 1.0 1.5 2.4 2667 chr2R 5417992 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420659 intron laccase2 + chr2R_6_5415001 chr2R_5415001 RAL-705 442 chr2R 5472365 5472390 chr2R 5472459 5472484 9 94 1.5 1.5 1.5 3.6 119 chr2R 5472365 intron CG30440 - chr2R 5472424 intron CG30440 - chr2R 5472484 intron CG30440 - chr2R_9_5470001 chr2R_5470001 RAL-705 443 chr2R 5473366 5473397 chr2R 5473461 5473492 6 95 1.0 1.5 1.2 2.7 126 chr2R 5473366 intron CG30440 - chr2R 5473429 intron CG30440 - chr2R 5473492 intron CG30440 - chr2R_6_5470001 chr2R_5470001 RAL-705 444 chr2R 5581401 5581422 chr2R 5627610 5627631 4 46209 7.0 4.0 5.5 0.6 46230 chr2R 5581401 intergenic not near genes chr2R 5604516 exon Fis1 - chr2R 5627631 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-705 445 chr2R 5682662 5682690 chr2R 5682754 5682781 8 92 1.5 1.5 1.5 3.2 119 chr2R 5682662 intron scaf - chr2R 5682722 intron scaf - chr2R 5682781 intron scaf - chr2R_8_5680001 chr2R_5680001 RAL-705 446 chr2R 5701755 5701782 chr2R 5701835 5701861 4 80 1.5 1.5 1.5 1.6 106 chr2R 5701755 intergenic vlc + chr2R 5701808 intergenic vlc + chr2R 5701861 intergenic vlc + chr2R_4_5700001 chr2R_5700001 RAL-705 447 chr2R 5837277 5837285 chr2R 5837357 5837365 7 80 4.0 5.0 4.5 1.3 88 chr2R 5837277 intron dpr12 + chr2R 5837321 intron dpr12 + chr2R 5837365 intron dpr12 + chr2R_7_5835001 chr2R_5835001 RAL-705 448 chr2R 5848964 5848987 chr2R 5849065 5849088 5 101 0.5 2.0 1.2 2.3 124 chr2R 5848964 intron dpr12 + chr2R 5849026 intron dpr12 + chr2R 5849088 intron dpr12 + chr2R_5_5845001 chr2R_5845001 RAL-705 449 chr2R 5869287 5869309 chr2R 5874363 5874384 flea 9 5075 4.0 6.5 5.2 1.5 5097 chr2R 5869287 intergenic not near genes chr2R 5871836 intergenic not near genes chr2R 5874384 intergenic not near genes chr2R_9_5870001 chr2R_5870001 RAL-705 450 chr2R 5876867 5876894 chr2R 5876969 5876996 5 102 4.0 2.5 3.2 1.2 129 chr2R 5876867 intergenic not near genes chr2R 5876932 intergenic not near genes chr2R 5876996 intergenic not near genes chr2R_5_5875001 chr2R_5875001 RAL-705 451 chr2R 5878929 5878954 chr2R 5879009 5879034 9 80 2.0 1.0 1.5 3.6 105 chr2R 5878929 intergenic CG44438 - chr2R 5878982 intergenic CG44438 - chr2R 5879034 intergenic CG44438 - chr2R_9_5875001 chr2R_5875001 RAL-705 452 chr2R 5947940 5947965 chr2R 5948089 5948115 7 150 3.5 0.0 1.8 2.5 175 chr2R 5947940 intergenic not near genes chr2R 5948028 intergenic not near genes chr2R 5948115 intergenic not near genes chr2R_7_5945001 chr2R_5945001 RAL-705 453 chr2R 5978991 5979017 chr2R 5979207 5979233 8 216 1.5 2.0 1.8 2.9 242 chr2R 5978991 intron mle - chr2R 5979112 intron mle - chr2R 5979233 intron mle - chr2R_8_5975001 chr2R_5975001 RAL-705 454 chr2R 6037455 6037474 chr2R 6037540 6037559 4 85 3.5 2.0 2.8 1.1 104 chr2R 6037455 intron CG14591 - chr2R 6037507 intron CG14591 - chr2R 6037559 intron CG14591 - chr2R_4_6035001 chr2R_6035001 RAL-705 455 chr2R 6086456 6086486 chr2R 6087324 6087354 11 868 2.5 3.5 3.0 2.8 898 chr2R 6086456 intergenic not near genes chr2R 6086905 intergenic not near genes chr2R 6087354 intergenic not near genes chr2R_11_6085001 chr2R_6085001 RAL-705 456 chr2R 6096716 6096739 chr2R 6101913 6101936 BS 9 5197 3.0 4.5 3.8 1.9 5220 chr2R 6096716 intron EcR - chr2R 6099326 intron EcR - chr2R 6101936 intron EcR - chr2R_9_6095001 chr2R_6095001 RAL-705 457 chr2R 6144412 6144434 chr2R 6144494 6144515 4 83 6.0 3.0 4.5 0.7 103 chr2R 6144412 intron EcR - chr2R 6144464 intron EcR - chr2R 6144515 intron EcR - chr2R_4_6140001 chr2R_6140001 RAL-705 458 chr2R 6168205 6168227 chr2R 6168287 6168309 8 82 2.5 2.5 2.5 2.3 104 chr2R 6168205 intron EcR - chr2R 6168257 intron EcR - chr2R 6168309 intron EcR - chr2R_8_6165001 chr2R_6165001 RAL-705 459 chr2R 6541075 6541101 chr2R 6541151 6541177 7 76 2.5 1.0 1.8 2.5 102 chr2R 6541075 intron jing + chr2R 6541126 intron jing + chr2R 6541177 intron jing + chr2R_7_6540001 chr2R_6540001 RAL-705 460 chr2R 6579772 6579795 chr2R 6584858 6584881 flea 6 5086 2.0 3.0 2.5 1.7 5109 chr2R 6579772 intron jing + chr2R 6582326 intron jing + chr2R 6584881 intron jing + chr2R_6_6580001 chr2R_6580001 RAL-705 461 chr2R 6612129 6612160 chr2R 6612209 6612240 10 80 1.5 1.0 1.2 4.5 111 chr2R 6612129 intron jing + chr2R 6612184 intron jing + chr2R 6612240 intron jing + chr2R_10_6610001 chr2R_6610001 RAL-705 462 chr2R 6633204 6633232 chr2R 6633281 6633309 8 77 1.5 0.5 1.0 4.0 105 chr2R 6633204 intergenic Vha16-1 -,Trap1 - chr2R 6633256 intergenic Vha16-1 -,Trap1 - chr2R 6633309 intergenic Vha16-1 -,Trap1 - chr2R_8_6630001 chr2R_6630001 RAL-705 463 chr2R 6646801 6646828 chr2R 6647074 6647101 8 273 3.0 2.5 2.8 2.1 300 chr2R 6646801 intergenic not near genes chr2R 6646951 intergenic not near genes chr2R 6647101 intergenic not near genes chr2R_8_6645001 chr2R_6645001 RAL-705 464 chr2R 6699595 6699615 chr2R 6699680 6699700 7 85 3.0 1.5 2.2 2.2 105 chr2R 6699595 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699700 intergenic Rab2 + chr2R_7_6695001 chr2R_6695001 RAL-705 465 chr2R 6846296 6846319 chr2R 6846628 6846651 5 332 2.0 5.0 3.5 1.1 355 chr2R 6846296 intergenic not near genes chr2R 6846474 intergenic not near genes chr2R 6846651 intergenic not near genes chr2R_5_6845001 chr2R_6845001 RAL-705 466 chr2R 6857078 6857111 chr2R 6857198 6857231 10 120 1.0 1.5 1.2 4.5 153 chr2R 6857078 intergenic not near genes chr2R 6857154 intergenic not near genes chr2R 6857231 intergenic not near genes chr2R_10_6855001 chr2R_6855001 RAL-705 467 chr2R 6952169 6952182 chr2R 6959749 6959762 opus 4 7580 2.0 3.0 2.5 1.1 7593 chr2R 6952169 intron,intron mim -,CheB42c - chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959762 intron,intron mim -,CheB42c - chr2R_4_6955001 chr2R_6955001 RAL-705 468 chr2R 6962449 6962472 chr2R 6962806 6962829 11 357 3.5 3.0 3.2 2.6 380 chr2R 6962449 intron,intron mim -,CheB42c - chr2R 6962639 intron,intron mim -,CheB42c - chr2R 6962829 intron,intron mim -,CheB42c - chr2R_11_6960001 chr2R_6960001 RAL-705 469 chr2R 7196566 7196591 chr2R 7201340 7201366 F-element 7 4775 3.0 0.5 1.8 2.5 4800 chr2R 7196566 intron pk + chr2R 7198966 intron pk + chr2R 7201366 intron pk + chr2R_7_7195001 chr2R_7195001 RAL-705 470 chr2R 7235824 7235852 chr2R 7240916 7240944 jockey 14 5092 2.5 5.0 3.8 2.9 5120 chr2R 7235824 intergenic not near genes chr2R 7238384 intergenic not near genes chr2R 7240944 intergenic not near genes chr2R_14_7235001 chr2R_7235001 RAL-705 471 chr2R 7391375 7391405 chr2R 7391454 7391485 12 80 3.5 7.5 5.5 1.8 110 chr2R 7391375 exon Gr43a - chr2R 7391430 exon Gr43a - chr2R 7391485 exon Gr43a - chr2R_12_7390001 chr2R_7390001 RAL-705 472 chr2R 7434899 7434925 chr2R 7439200 7439224 Juan 6 4301 4.0 5.5 4.8 1.0 4325 chr2R 7434899 intergenic so + chr2R 7437062 intergenic not near genes chr2R 7439224 intergenic not near genes chr2R_6_7435001 chr2R_7435001 RAL-705 473 chr2R 7551684 7551717 chr2R 7551774 7551808 10 91 2.5 5.0 3.8 2.1 124 chr2R 7551684 intron Corin + chr2R 7551746 intron Corin + chr2R 7551808 intron Corin + chr2R_10_7550001 chr2R_7550001 RAL-705 474 chr2R 7608407 7608428 chr2R 7613609 7613631 I-element 5 5203 2.5 0.0 1.2 2.3 5224 chr2R 7608407 intron CG1358 - chr2R 7611019 intron CG1358 - chr2R 7613631 intron CG1358 - chr2R_5_7610001 chr2R_7610001 RAL-705 475 chr2R 7815680 7815704 chr2R 7822149 7822173 Burdock 7 6469 2.5 3.0 2.8 1.8 6493 chr2R 7815680 intergenic CG1882 + chr2R 7818926 intergenic not near genes chr2R 7822173 3` UTR cathD - chr2R_7_7815001 chr2R_7815001 RAL-705 476 chr2R 7851258 7851292 chr2R 7851344 7851378 10 86 1.0 1.0 1.0 5.0 120 chr2R 7851258 intron Dgk - chr2R 7851318 intron Dgk - chr2R 7851378 intron Dgk - chr2R_10_7850001 chr2R_7850001 RAL-705 477 chr2R 7869199 7869215 chr2R 7873984 7874001 Doc 6 4786 2.5 5.0 3.8 1.2 4802 chr2R 7869199 intron Dgk - chr2R 7871600 intron Dgk - chr2R 7874001 intron Dgk - chr2R_6_7870001 chr2R_7870001 RAL-705 478 chr2R 7897140 7897153 chr2R 7897229 7897242 4 89 0.0 6.0 3.0 1.0 102 chr2R 7897140 intron CG30377 + chr2R 7897191 intron CG30377 + chr2R 7897242 intron CG30377 + chr2R_4_7895001 chr2R_7895001 RAL-705 479 chr2R 7942184 7942201 chr2R 7942275 7942292 8 91 2.0 3.0 2.5 2.3 108 chr2R 7942184 3` UTR CG14764 - chr2R 7942238 3` UTR CG14764 - chr2R 7942292 3` UTR CG14764 - chr2R_8_7940001 chr2R_7940001 RAL-705 480 chr2R 8015647 8015680 chr2R 8017668 8017702 5 2022 1.5 3.5 2.5 1.4 2055 chr2R 8015647 intergenic mir-4981 + chr2R 8016674 intergenic not near genes chr2R 8017702 intergenic not near genes chr2R_5_8015001 chr2R_8015001 RAL-705 481 chr2R 8067071 8067096 chr2R 8067152 8067180 6 83 1.5 5.5 3.5 1.3 109 chr2R 8067071 intron CG17977 - chr2R 8067126 exon CG17977 - chr2R 8067180 exon CG17977 - chr2R_6_8065001 chr2R_8065001 RAL-705 482 chr2R 8076682 8076710 chr2R 8076762 8076790 13 80 2.5 1.0 1.8 4.6 108 chr2R 8076682 intron lig + chr2R 8076736 intron lig + chr2R 8076790 intron lig + chr2R_13_8075001 chr2R_8075001 RAL-705 483 chr2R 8089262 8089282 chr2R 8089348 8089368 4 86 3.0 4.0 3.5 0.9 106 chr2R 8089262 3` UTR sut2 + chr2R 8089315 intergenic sut2 +,sut3 + chr2R 8089368 intergenic sut2 +,sut3 + chr2R_4_8085001 chr2R_8085001 RAL-705 484 chr2R 8114046 8114060 chr2R 8114135 8114149 4 88 0.0 2.5 1.2 1.8 103 chr2R 8114046 intergenic Asap - chr2R 8114098 intergenic Asap - chr2R 8114149 intergenic Asap - chr2R_4_8110001 chr2R_8110001 RAL-705 485 chr2R 8155581 8155613 chr2R 8155670 8155702 14 89 3.0 2.0 2.5 4.0 121 chr2R 8155581 intron,intron Lpin -,kermit - chr2R 8155642 intron,intron Lpin -,kermit - chr2R 8155702 intron,intron Lpin -,kermit - chr2R_14_8155001 chr2R_8155001 RAL-705 486 chr2R 8160935 8160949 chr2R 8161025 8161038 1360 5 90 2.5 10.5 6.5 0.7 103 chr2R 8160935 intron CG8708 - chr2R 8160986 intron CG8708 - chr2R 8161038 intron CG8708 - chr2R_5_8160001 chr2R_8160001 RAL-705 487 chr2R 8166539 8166563 chr2R 8168728 8168756 13 2190 25.5 21.5 23.5 0.5 2217 chr2R 8166539 exon Rs1 + chr2R 8167648 exon Rs1 + chr2R 8168756 exon Gasz + chr2R_13_8165001 chr2R_8165001 RAL-705 488 chr2R 8249561 8249597 chr2R 8249643 8249677 6 82 1.0 2.0 1.5 2.4 116 chr2R 8249561 5` UTR CG44439 - chr2R 8249619 intergenic CG44439 - chr2R 8249677 intergenic CG44439 - chr2R_6_8245001 chr2R_8245001 RAL-705 489 chr2R 8330876 8330893 chr2R 8331362 8331379 roo 13 486 1.0 3.0 2.0 4.3 503 chr2R 8330876 intron pdm3 + chr2R 8331128 intron pdm3 + chr2R 8331379 intron pdm3 + chr2R_13_8330001 chr2R_8330001 RAL-705 490 chr2R 8333228 8333256 chr2R 8333346 8333374 8 118 1.5 0.5 1.0 4.0 146 chr2R 8333228 intron pdm3 + chr2R 8333301 intron pdm3 + chr2R 8333374 intron pdm3 + chr2R_8_8330001 chr2R_8330001 RAL-705 491 chr2R 8398211 8398227 chr2R 8402992 8403008 Doc 8 4781 1.5 2.0 1.8 2.9 4797 chr2R 8398211 intron CG2121 - chr2R 8400610 intron CG2121 - chr2R 8403008 intron CG2121 - chr2R_8_8400001 chr2R_8400001 RAL-705 492 chr2R 8468856 8468883 chr2R 8468971 8468998 9 115 4.0 2.0 3.0 2.2 142 chr2R 8468856 3` UTR Mal-A7 - chr2R 8468927 3` UTR Mal-A7 - chr2R 8468998 3` UTR Mal-A7 - chr2R_9_8465001 chr2R_8465001 RAL-705 493 chr2R 8483966 8483990 chr2R 8484041 8484066 5 76 0.5 2.0 1.2 2.3 100 chr2R 8483966 intron mtt - chr2R 8484016 intron mtt - chr2R 8484066 intron mtt - chr2R_5_8480001 chr2R_8480001 RAL-705 494 chr2R 8489739 8489758 chr2R 8489818 8489836 5 78 1.5 1.5 1.5 2.0 97 chr2R 8489739 intron mtt - chr2R 8489788 intron mtt - chr2R 8489836 intron mtt - chr2R_5_8485001 chr2R_8485001 RAL-705 495 chr2R 8566029 8566061 chr2R 8566981 8567013 1360 8 952 3.0 1.5 2.2 2.5 984 chr2R 8566029 5` UTR Cyp6a14 - chr2R 8566521 5` UTR Cyp6a14 - chr2R 8567013 5` UTR Cyp6a14 - chr2R_8_8565001 chr2R_8565001 RAL-705 496 chr2R 8595962 8595988 chr2R 8596040 8596066 8 78 2.5 2.5 2.5 2.3 104 chr2R 8595962 intergenic not near genes chr2R 8596014 intergenic not near genes chr2R 8596066 intergenic not near genes chr2R_8_8595001 chr2R_8595001 RAL-705 497 chr2R 8645640 8645669 chr2R 8645767 8645796 9 127 2.0 2.0 2.0 3.0 156 chr2R 8645640 intergenic not near genes chr2R 8645718 intergenic not near genes chr2R 8645796 intergenic not near genes chr2R_9_8645001 chr2R_8645001 RAL-705 498 chr2R 8714705 8714720 chr2R 8714791 8714807 7 87 0.0 3.0 1.5 2.8 102 chr2R 8714705 3` UTR PGRP-SC1b + chr2R 8714756 3` UTR PGRP-SC1b + chr2R 8714807 3` UTR PGRP-SC1b + chr2R_7_8710001 chr2R_8710001 RAL-705 499 chr2R 8722763 8722784 chr2R 8723004 8723025 pogo 11 241 3.0 2.5 2.8 2.9 262 chr2R 8722763 intron CG14767 - chr2R 8722894 intron CG14767 - chr2R 8723025 intron CG14767 - chr2R_11_8720001 chr2R_8720001 RAL-705 500 chr2R 8789467 8789494 chr2R 8789548 8789576 9 82 1.0 2.5 1.8 3.2 109 chr2R 8789467 intergenic not near genes chr2R 8789522 intergenic not near genes chr2R 8789576 intergenic not near genes chr2R_9_8785001 chr2R_8785001 RAL-705 501 chr2R 8801319 8801350 chr2R 8801409 8801440 8 90 2.5 1.5 2.0 2.7 121 chr2R 8801319 intron sns + chr2R 8801380 intron sns + chr2R 8801440 intron sns + chr2R_8_8800001 chr2R_8800001 RAL-705 502 chr2R 8844476 8844499 chr2R 8844599 8844622 6 123 2.5 0.0 1.2 2.7 146 chr2R 8844476 intron sns + chr2R 8844549 intron sns + chr2R 8844622 intron sns + chr2R_6_8840001 chr2R_8840001 RAL-705 503 chr2R 9206097 9206132 chr2R 9206179 9206213 21 82 3.0 7.0 5.0 3.5 116 chr2R 9206097 exon CG8027 - chr2R 9206155 exon CG8027 - chr2R 9206213 exon CG8027 - chr2R_21_9205001 chr2R_9205001 RAL-705 504 chr2R 9212701 9212719 chr2R 9213183 9213205 roo 5 485 4.5 3.0 3.8 1.0 504 chr2R 9212701 intergenic CR45309 + chr2R 9212953 intergenic CR45309 + chr2R 9213205 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-705 505 chr2R 9267985 9268002 chr2R 9268071 9268088 5 86 3.0 1.5 2.2 1.6 103 chr2R 9267985 intron Pkn - chr2R 9268036 intron Pkn - chr2R 9268088 intron Pkn - chr2R_5_9265001 chr2R_9265001 RAL-705 506 chr2R 9368126 9368152 chr2R 9368202 9368227 6 76 2.5 0.0 1.2 2.7 101 chr2R 9368126 intron CG13954 - chr2R 9368176 intron CG13954 - chr2R 9368227 intron CG13954 - chr2R_6_9365001 chr2R_9365001 RAL-705 507 chr2R 9412087 9412102 chr2R 9412189 9412212 4 108 5.0 1.0 3.0 1.0 125 chr2R 9412087 intron wun - chr2R 9412150 intron wun - chr2R 9412212 intron wun - chr2R_4_9410001 chr2R_9410001 RAL-705 508 chr2R 9480081 9480107 chr2R 9490611 9490638 roo 5 10531 1.5 2.0 1.8 1.8 10557 chr2R 9480081 intergenic not near genes chr2R 9485360 intergenic not near genes chr2R 9490638 intergenic not near genes chr2R_5_9485001 chr2R_9485001 RAL-705 509 chr2R 9510669 9510696 chr2R 9510785 9510812 9 115 1.5 1.5 1.5 3.6 143 chr2R 9510669 intron brp + chr2R 9510740 intron brp + chr2R 9510812 intron brp + chr2R_9_9510001 chr2R_9510001 RAL-705 510 chr2R 9653259 9653287 chr2R 9653343 9653371 13 83 2.5 2.5 2.5 3.7 112 chr2R 9653259 intron Mmp2 - chr2R 9653315 intron Mmp2 - chr2R 9653371 intron Mmp2 - chr2R_13_9650001 chr2R_9650001 RAL-705 511 chr2R 9687237 9687263 chr2R 9687319 9687345 8 82 4.5 3.5 4.0 1.6 108 chr2R 9687237 intergenic not near genes chr2R 9687291 intergenic not near genes chr2R 9687345 intergenic not near genes chr2R_8_9685001 chr2R_9685001 RAL-705 512 chr2R 9726615 9726635 chr2R 9734166 9734186 17.6 5 7551 2.5 1.5 2.0 1.7 7571 chr2R 9726615 intron sqa - chr2R 9730400 intron sqa - chr2R 9734186 intron sqa - chr2R_5_9730001 chr2R_9730001 RAL-705 513 chr2R 9862761 9862784 chr2R 9862837 9862859 12 75 4.0 4.5 4.2 2.3 98 chr2R 9862761 intergenic not near genes chr2R 9862810 intergenic not near genes chr2R 9862859 intergenic not near genes chr2R_12_9860001 chr2R_9860001 RAL-705 514 chr2R 9935025 9935056 chr2R 9935107 9935138 12 82 3.0 1.0 2.0 4.0 113 chr2R 9935025 intron Mef2 - chr2R 9935082 intron Mef2 - chr2R 9935138 intron Mef2 - chr2R_12_9935001 chr2R_9935001 RAL-705 515 chr2R 9966964 9966988 chr2R 9967065 9967089 8 101 3.5 3.0 3.2 1.9 125 chr2R 9966964 intergenic CG12133 + chr2R 9967026 intergenic CG12133 + chr2R 9967089 intergenic CG12133 + chr2R_8_9965001 chr2R_9965001 RAL-705 516 chr2R 10017645 10017676 chr2R 10017724 10017752 9 78 2.5 1.0 1.8 3.2 107 chr2R 10017645 intron Pka-R2 - chr2R 10017698 intron Pka-R2 - chr2R 10017752 intron Pka-R2 - chr2R_9_10015001 chr2R_10015001 RAL-705 517 chr2R 10313314 10313351 chr2R 10313402 10313439 10 88 0.5 2.0 1.2 4.5 125 chr2R 10313314 intergenic not near genes chr2R 10313376 intergenic not near genes chr2R 10313439 intergenic Ndg + chr2R_10_10310001 chr2R_10310001 RAL-705 518 chr2R 10352674 10352703 chr2R 10352751 10352779 8 77 2.5 1.0 1.8 2.9 105 chr2R 10352674 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352779 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_8_10350001 chr2R_10350001 RAL-705 519 chr2R 10387982 10388002 chr2R 10388079 10388099 5 97 0.0 2.5 1.2 2.3 117 chr2R 10387982 intron CG42732 - chr2R 10388040 intron CG42732 - chr2R 10388099 intron CG42732 - chr2R_5_10385001 chr2R_10385001 RAL-705 520 chr2R 10429019 10429051 chr2R 10429096 10429128 10 77 1.0 0.5 0.8 5.6 109 chr2R 10429019 intergenic not near genes chr2R 10429074 intergenic not near genes chr2R 10429128 intergenic not near genes chr2R_10_10425001 chr2R_10425001 RAL-705 521 chr2R 10454100 10454127 chr2R 10454176 10454204 7 77 0.5 3.5 2.0 2.3 104 chr2R 10454100 intron,intron Galphao +,Cyp49a1 - chr2R 10454152 intron,intron Galphao +,Cyp49a1 - chr2R 10454204 intron,intron Galphao +,Cyp49a1 - chr2R_7_10450001 chr2R_10450001 RAL-705 522 chr2R 10574631 10574647 chr2R 10574713 10574729 4 82 1.0 2.0 1.5 1.6 98 chr2R 10574631 intron psq + chr2R 10574680 intron psq + chr2R 10574729 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-705 523 chr2R 10585575 10585590 chr2R 10594158 10594173 Tirant 4 8583 1.0 2.0 1.5 1.6 8598 chr2R 10585575 intron psq + chr2R 10589874 intron psq + chr2R 10594173 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-705 524 chr2R 10621239 10621254 chr2R 10621354 10621369 5 114 3.0 1.5 2.2 1.6 130 chr2R 10621239 intron CG11883 + chr2R 10621304 intron CG11883 + chr2R 10621369 intron CG11883 + chr2R_5_10620001 chr2R_10620001 RAL-705 525 chr2R 10644064 10644088 chr2R 10644142 10644166 5 78 1.0 0.0 0.5 3.3 102 chr2R 10644064 intron Git - chr2R 10644115 intron Git - chr2R 10644166 intron Git - chr2R_5_10640001 chr2R_10640001 RAL-705 526 chr2R 10652226 10652258 chr2R 10652356 10652388 11 129 3.5 2.0 2.8 2.9 162 chr2R 10652226 intergenic not near genes chr2R 10652307 intergenic not near genes chr2R 10652388 intergenic not near genes chr2R_11_10650001 chr2R_10650001 RAL-705 527 chr2R 10791041 10791066 chr2R 10791124 10791149 7 83 1.5 1.5 1.5 2.8 108 chr2R 10791041 intron CG33144 - chr2R 10791095 intron CG33144 - chr2R 10791149 intron CG33144 - chr2R_7_10790001 chr2R_10790001 RAL-705 528 chr2R 10794911 10794926 chr2R 10794988 10795004 4 78 2.0 1.5 1.8 1.4 93 chr2R 10794911 intron CG33144 - chr2R 10794958 intron CG33144 - chr2R 10795004 intron CG33144 - chr2R_4_10790001 chr2R_10790001 RAL-705 529 chr2R 10827332 10827362 chr2R 10827419 10827450 9 88 1.0 3.0 2.0 3.0 118 chr2R 10827332 exon CG12325 + chr2R 10827391 3` UTR CG12325 + chr2R 10827450 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_9_10825001 chr2R_10825001 RAL-705 530 chr2R 10937799 10937827 chr2R 10937936 10937965 8 138 0.0 3.5 1.8 2.9 166 chr2R 10937799 intergenic not near genes chr2R 10937882 intergenic not near genes chr2R 10937965 intergenic Spn47C - chr2R_8_10935001 chr2R_10935001 RAL-705 531 chr2R 10946210 10946239 chr2R 10946565 10946594 5 354 2.5 5.5 4.0 1.0 384 chr2R 10946210 intergenic CR45228 + chr2R 10946402 5` UTR CR45228 + chr2R 10946594 5` UTR CR45228 + chr2R_5_10945001 chr2R_10945001 RAL-705 532 chr2R 10948027 10948061 chr2R 10955578 10955612 17.6 9 7550 0.5 4.5 2.5 2.6 7585 chr2R 10948027 intergenic not near genes chr2R 10951820 intergenic not near genes chr2R 10955612 intergenic not near genes chr2R_9_10950001 chr2R_10950001 RAL-705 533 chr2R 10979658 10979679 chr2R 10980130 10980150 297 7 472 2.0 0.0 1.0 3.5 492 chr2R 10979658 intergenic not near genes chr2R 10979904 intergenic not near genes chr2R 10980150 intergenic not near genes chr2R_7_10975001 chr2R_10975001 RAL-705 534 chr2R 11009814 11009848 chr2R 11018988 11019022 roo 10 9174 3.5 3.0 3.2 2.4 9208 chr2R 11009814 intron luna - chr2R 11014418 intron luna - chr2R 11019022 intron luna - chr2R_10_11010001 chr2R_11010001 RAL-705 535 chr2R 11034286 11034314 chr2R 11034494 11034522 7 208 3.0 3.0 3.0 1.8 236 chr2R 11034286 intron luna - chr2R 11034404 intron luna - chr2R 11034522 intron luna - chr2R_7_11030001 chr2R_11030001 RAL-705 536 chr2R 11147072 11147094 chr2R 11147160 11147182 8 88 2.0 4.0 3.0 2.0 110 chr2R 11147072 intron,3` UTR CG13229 -,CG13231 + chr2R 11147127 intron,3` UTR CG13229 -,CG13231 + chr2R 11147182 intron CG13229 - chr2R_8_11145001 chr2R_11145001 RAL-705 537 chr2R 11207825 11207844 chr2R 11208018 11208036 BS 4 193 4.5 3.5 4.0 0.8 211 chr2R 11207825 intron shn + chr2R 11207930 intron shn + chr2R 11208036 intron shn + chr2R_4_11205001 chr2R_11205001 RAL-705 538 chr2R 11276804 11276818 chr2R 11276972 11276986 5 168 2.0 1.0 1.5 2.0 182 chr2R 11276804 intergenic not near genes chr2R 11276895 intergenic not near genes chr2R 11276986 intergenic not near genes chr2R_5_11275001 chr2R_11275001 RAL-705 539 chr2R 11344145 11344158 chr2R 11344241 11344254 5 96 0.0 2.5 1.2 2.3 109 chr2R 11344145 intergenic alphaTry - chr2R 11344200 intergenic alphaTry - chr2R 11344254 intergenic alphaTry - chr2R_5_11340001 chr2R_11340001 RAL-705 540 chr2R 11415520 11415548 chr2R 11418669 11418697 opus 8 3149 3.5 5.5 4.5 1.5 3177 chr2R 11415520 intron Drip - chr2R 11417108 intron Drip - chr2R 11418697 intron Drip - chr2R_8_11415001 chr2R_11415001 RAL-705 541 chr2R 11472648 11472677 chr2R 11473845 11473874 pogo 8 1197 2.5 2.5 2.5 2.3 1226 chr2R 11472648 intergenic not near genes chr2R 11473261 intergenic not near genes chr2R 11473874 intergenic not near genes chr2R_8_11470001 chr2R_11470001 RAL-705 542 chr2R 11516799 11516825 chr2R 11516882 11516908 7 83 2.0 0.5 1.2 3.2 109 chr2R 11516799 intergenic not near genes chr2R 11516854 intergenic not near genes chr2R 11516908 intergenic not near genes chr2R_7_11515001 chr2R_11515001 RAL-705 543 chr2R 11561960 11561975 chr2R 11562038 11562052 9 78 2.0 8.5 5.2 1.5 92 chr2R 11561960 intergenic not near genes chr2R 11562006 intergenic not near genes chr2R 11562052 intergenic not near genes chr2R_9_11560001 chr2R_11560001 RAL-705 544 chr2R 11614634 11614799 chr2R 11614721 11614887 7 88 1.0 3.0 2.0 2.3 253 chr2R 11614634 intron tou - chr2R 11614760 intron tou - chr2R 11614887 intron tou - chr2R_7_11610001 chr2R_11610001 RAL-705 545 chr2R 11638690 11638717 chr2R 11638939 11638986 6 266 5.0 0.0 2.5 1.7 296 chr2R 11638690 intron CG9005 - chr2R 11638838 intron CG9005 - chr2R 11638986 intron CG9005 - chr2R_6_11635001 chr2R_11635001 RAL-705 546 chr2R 11677872 11677897 chr2R 11677950 11677975 9 78 1.0 0.5 0.8 5.0 103 chr2R 11677872 intron,exon Roc2 -,Tret1-2 + chr2R 11677924 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677975 intron,3` UTR Roc2 -,Tret1-2 + chr2R_9_11675001 chr2R_11675001 RAL-705 547 chr2R 11699692 11699727 chr2R 11699775 11699810 6 82 0.0 3.5 1.8 2.1 118 chr2R 11699692 intergenic not near genes chr2R 11699751 intergenic not near genes chr2R 11699810 intergenic not near genes chr2R_6_11695001 chr2R_11695001 RAL-705 548 chr2R 11724174 11724181 chr2R 11724259 11724266 4 85 2.5 2.0 2.2 1.2 92 chr2R 11724174 intron pyr + chr2R 11724220 intron pyr + chr2R 11724266 intron pyr + chr2R_4_11720001 chr2R_11720001 RAL-705 549 chr2R 11792507 11792514 chr2R 11792593 11792602 5 87 2.0 5.5 3.8 1.0 95 chr2R 11792507 intron ths + chr2R 11792554 intron ths + chr2R 11792602 intron ths + chr2R_5_11790001 chr2R_11790001 RAL-705 550 chr2R 11945485 11945502 chr2R 11945772 11945789 5 287 2.5 0.0 1.2 2.3 304 chr2R 11945485 intron CG13188 + chr2R 11945637 intron CG13188 + chr2R 11945789 intron CG13188 + chr2R_5_11945001 chr2R_11945001 RAL-705 551 chr2R 8518782 8518802 chr2R 12066176 12066196 7 3547394 7.5 9.0 8.2 0.8 3547414 chr2R 8518782 intron mtt - chr2R 10292489 intron CAP + chr2R 12066196 intron CG8888 - chr2R_7_10290001 chr2R_10290001 RAL-705 552 chr2R 12093962 12093975 chr2R 12094074 12094088 4 113 2.5 2.5 2.5 1.1 126 chr2R 12093962 intron jeb - chr2R 12094025 intron jeb - chr2R 12094088 intron jeb - chr2R_4_12090001 chr2R_12090001 RAL-705 553 chr2R 12146486 12146499 chr2R 12147608 12147621 6 1122 10.5 18.5 14.5 0.4 1135 chr2R 12146486 intron,3` UTR Hen1 +,CG8878 - chr2R 12147054 intron,exon Hen1 +,CG8878 - chr2R 12147621 intron,exon Hen1 +,CG8878 - chr2R_6_12145001 chr2R_12145001 RAL-705 554 chr2R 12145919 12145945 chr2R 12148613 12148639 8 2694 27.0 28.0 27.5 0.3 2720 chr2R 12145919 exon Hen1 + chr2R 12147279 intron,intron Hen1 +,CG8878 - chr2R 12148639 intron,exon Hen1 +,CG8878 - chr2R_8_12145001 chr2R_12145001 RAL-705 555 chr2R 12186001 12186032 chr2R 12186096 12186127 7 95 2.5 3.5 3.0 1.8 126 chr2R 12186001 intron Cyp6g1 + chr2R 12186064 intron Cyp6g1 + chr2R 12186127 intron Cyp6g1 + chr2R_7_12185001 chr2R_12185001 RAL-705 556 chr2R 12187471 12187507 chr2R 12190087 12190123 28 2617 64.0 42.0 53.0 0.5 2652 chr2R 12187471 exon Cyp6g1 + chr2R 12188797 exon Cyp6g2 - chr2R 12190123 exon Cyp6g2 - chr2R_28_12185001 chr2R_12185001 RAL-705 557 chr2R 12210131 12210164 chr2R 12210212 12210245 10 81 2.5 2.0 2.2 3.1 114 chr2R 12210131 exon Sr-CII - chr2R 12210188 intron Sr-CII - chr2R 12210245 intron Sr-CII - chr2R_10_12210001 chr2R_12210001 RAL-705 558 chr2R 12334881 12334895 chr2R 12334959 12334973 4 78 2.0 2.5 2.2 1.2 92 chr2R 12334881 intergenic CG8490 + chr2R 12334927 intergenic CG8490 + chr2R 12334973 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 RAL-705 559 chr2R 12492097 12492123 chr2R 12492182 12492209 10 85 4.0 0.5 2.2 3.1 112 chr2R 12492097 intron fdl - chr2R 12492153 intron fdl - chr2R 12492209 intron fdl - chr2R_10_12490001 chr2R_12490001 RAL-705 560 chr2R 12501708 12501725 chr2R 12503867 12503881 Rt1c 5 2159 1.0 2.0 1.5 2.0 2173 chr2R 12501708 intron fdl - chr2R 12502794 intron fdl - chr2R 12503881 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-705 561 chr2R 12593130 12593164 chr2R 12593212 12593246 9 82 1.0 1.5 1.2 4.1 116 chr2R 12593130 intergenic CR45279 -,Sin3A -,Amph + chr2R 12593188 intergenic CR45279 -,Sin3A -,Amph + chr2R 12593246 3` UTR CR45279 - chr2R_9_12590001 chr2R_12590001 RAL-705 562 chr2R 12597957 12597990 chr2R 12598057 12598088 7 99 1.0 2.0 1.5 2.8 131 chr2R 12597957 intron Amph + chr2R 12598022 intron Amph + chr2R 12598088 intron Amph + chr2R_7_12595001 chr2R_12595001 RAL-705 563 chr2R 12627488 12627504 chr2R 12627581 12627597 4 93 0.0 4.0 2.0 1.3 109 chr2R 12627488 intron CG17760 + chr2R 12627542 intron CG17760 + chr2R 12627597 exon CG17760 + chr2R_4_12625001 chr2R_12625001 RAL-705 564 chr2R 12659892 12659913 chr2R 12659983 12660002 4 90 2.5 3.0 2.8 1.1 110 chr2R 12659892 3` UTR nemy - chr2R 12659947 3` UTR nemy - chr2R 12660002 3` UTR nemy - chr2R_4_12655001 chr2R_12655001 RAL-705 565 chr2R 12707522 12707549 chr2R 12715888 12715915 roo 6 8365 1.5 2.5 2.0 2.0 8393 chr2R 12707522 intron CG42663 + chr2R 12711718 intron CG42663 + chr2R 12715915 intron CG42663 + chr2R_6_12710001 chr2R_12710001 RAL-705 566 chr2R 12748791 12748798 chr2R 12748879 12748885 4 88 1.0 3.0 2.0 1.3 94 chr2R 12748791 intron CG42663 + chr2R 12748838 intron CG42663 + chr2R 12748885 intron CG42663 + chr2R_4_12745001 chr2R_12745001 RAL-705 567 chr2R 12789295 12789325 chr2R 12797655 12797688 roo 7 8362 2.0 3.5 2.8 1.8 8393 chr2R 12789295 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797688 intron,3` UTR sca +,CR45137 - chr2R_7_12790001 chr2R_12790001 RAL-705 568 chr2R 12819456 12819475 chr2R 12824525 12824544 jockey 7 5069 3.0 2.0 2.5 2.0 5088 chr2R 12819456 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824544 intergenic not near genes chr2R_7_12820001 chr2R_12820001 RAL-705 569 chr2R 12897459 12897482 chr2R 12897550 12897573 5 91 1.5 1.5 1.5 2.0 114 chr2R 12897459 intron vg + chr2R 12897516 intron vg + chr2R 12897573 intron vg + chr2R_5_12895001 chr2R_12895001 RAL-705 570 chr2R 12908490 12908499 chr2R 12908569 12908578 4 79 2.0 6.0 4.0 0.8 88 chr2R 12908490 intergenic not near genes chr2R 12908534 intergenic not near genes chr2R 12908578 intergenic not near genes chr2R_4_12905001 chr2R_12905001 RAL-705 571 chr2R 13061348 13061374 chr2R 13061429 13061455 8 81 2.0 0.5 1.2 3.6 107 chr2R 13061348 intron Drl-2 - chr2R 13061402 intron Drl-2 - chr2R 13061455 intron Drl-2 - chr2R_8_13060001 chr2R_13060001 RAL-705 572 chr2R 13136843 13136860 chr2R 13141641 13141658 Doc 6 4798 2.5 2.5 2.5 1.7 4815 chr2R 13136843 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141658 intron Cap-G + chr2R_6_13135001 chr2R_13135001 RAL-705 573 chr2R 13376913 13376928 chr2R 13377664 13377679 4 750 2.5 3.5 3.0 1.0 766 chr2R 13376913 exon CG10814 - chr2R 13377296 exon CG10814 - chr2R 13377679 exon CG10814 - chr2R_4_13375001 chr2R_13375001 RAL-705 574 chr2R 13439108 13439226 chr2R 13439223 13439302 4 117 0.0 0.0 0.0 4.0 194 chr2R 13439108 intergenic CG42321 -,cnn - chr2R 13439205 intergenic cnn -,CG42321 - chr2R 13439302 intergenic cnn -,CG42321 - chr2R_4_13435001 chr2R_13435001 RAL-705 575 chr2R 13497256 13497289 chr2R 13497348 13497381 20 92 1.5 4.5 3.0 5.0 125 chr2R 13497256 intron drk - chr2R 13497318 intron drk - chr2R 13497381 exon drk - chr2R_20_13495001 chr2R_13495001 RAL-705 576 chr2R 13580496 13580517 chr2R 13580846 13580866 jockey 4 350 1.0 3.0 2.0 1.3 370 chr2R 13580496 3` UTR CG6191 - chr2R 13580681 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580866 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 RAL-705 577 chr2R 13652706 13652720 chr2R 13652785 13652796 7 78 4.0 0.5 2.2 2.2 90 chr2R 13652706 intron fas + chr2R 13652751 intron fas + chr2R 13652796 intron fas + chr2R_7_13650001 chr2R_13650001 RAL-705 578 chr2R 13768982 13769010 chr2R 13769081 13769109 8 98 0.5 3.0 1.8 2.9 127 chr2R 13768982 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769109 intergenic not near genes chr2R_8_13765001 chr2R_13765001 RAL-705 579 chr2R 13823029 13823065 chr2R 13823109 13823145 8 80 2.0 0.5 1.2 3.6 116 chr2R 13823029 intron fl(2)d - chr2R 13823087 intron fl(2)d - chr2R 13823145 intron fl(2)d - chr2R_8_13820001 chr2R_13820001 RAL-705 580 chr2R 13868897 13868920 chr2R 13868975 13868999 8 79 1.5 2.5 2.0 2.7 102 chr2R 13868897 intron shot - chr2R 13868948 intron shot - chr2R 13868999 intron shot - chr2R_8_13865001 chr2R_13865001 RAL-705 581 chr2R 13905602 13905629 chr2R 13907583 13907611 Rt1a 7 1982 3.0 1.5 2.2 2.2 2009 chr2R 13905602 intron shot - chr2R 13906606 intron shot - chr2R 13907611 intron shot - chr2R_7_13905001 chr2R_13905001 RAL-705 582 chr2R 13944226 13944268 chr2R 13944317 13944350 5 86 0.0 4.0 2.0 1.7 124 chr2R 13944226 3` UTR AGO1 - chr2R 13944288 3` UTR AGO1 - chr2R 13944350 3` UTR AGO1 - chr2R_5_13940001 chr2R_13940001 RAL-705 583 chr2R 13986881 13986908 chr2R 13986970 13986997 10 89 2.0 3.5 2.8 2.6 116 chr2R 13986881 intron RN-tre - chr2R 13986939 intron RN-tre - chr2R 13986997 intron RN-tre - chr2R_10_13985001 chr2R_13985001 RAL-705 584 chr2R 14018155 14018188 chr2R 14018239 14018272 11 84 1.5 1.5 1.5 4.4 117 chr2R 14018155 intron mam + chr2R 14018214 intron mam + chr2R 14018272 intron mam + chr2R_11_14015001 chr2R_14015001 RAL-705 585 chr2R 14087854 14087875 chr2R 14087939 14087960 4 85 2.5 4.0 3.2 1.0 106 chr2R 14087854 intron Prosap - chr2R 14087907 intron Prosap - chr2R 14087960 intron Prosap - chr2R_4_14085001 chr2R_14085001 RAL-705 586 chr2R 14266761 14266784 chr2R 14266837 14266860 5 76 1.0 3.0 2.0 1.7 99 chr2R 14266761 intron CG8547 - chr2R 14266810 intron CG8547 - chr2R 14266860 intron CG8547 - chr2R_5_14265001 chr2R_14265001 RAL-705 587 chr2R 14342229 14342240 chr2R 14342305 14342316 5 76 1.0 5.0 3.0 1.2 87 chr2R 14342229 intron Shroom + chr2R 14342272 intron Shroom + chr2R 14342316 intron Shroom + chr2R_5_14340001 chr2R_14340001 RAL-705 588 chr2R 14357555 14357564 chr2R 14357645 14357654 5 90 4.0 2.0 3.0 1.2 99 chr2R 14357555 intergenic CG8617 -,Arc1 - chr2R 14357604 intergenic Arc1 -,CG8617 - chr2R 14357654 intergenic Arc1 -,CG8617 - chr2R_5_14355001 chr2R_14355001 RAL-705 589 chr2R 14467309 14467326 chr2R 14476466 14476484 roo 5 9158 2.5 4.0 3.2 1.2 9175 chr2R 14467309 intergenic not near genes chr2R 14471896 intergenic not near genes chr2R 14476484 5` UTR CR44462 + chr2R_5_14470001 chr2R_14470001 RAL-705 590 chr2R 14565562 14565589 chr2R 14565639 14565666 7 77 4.5 2.5 3.5 1.6 104 chr2R 14565562 intron ttv + chr2R 14565614 intron ttv + chr2R 14565666 intron ttv + chr2R_7_14565001 chr2R_14565001 RAL-705 591 chr2R 14623877 14623901 chr2R 14623972 14623997 9 96 0.0 0.5 0.2 7.5 120 chr2R 14623877 intron Uhg5 + chr2R 14623937 5` UTR Uhg5 + chr2R 14623997 intron Uhg5 + chr2R_9_14620001 chr2R_14620001 RAL-705 592 chr2R 14797602 14797620 chr2R 14797697 14797715 4 94 0.0 0.0 0.0 4.0 113 chr2R 14797602 intron kn - chr2R 14797658 intron kn - chr2R 14797715 intron kn - chr2R_4_14795001 chr2R_14795001 RAL-705 593 chr2R 14889221 14889236 chr2R 14897829 14897844 Max-element 4 8608 4.0 0.0 2.0 1.3 8623 chr2R 14889221 intergenic Cyp6a8 - chr2R 14893532 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_4_14890001 chr2R_14890001 RAL-705 594 chr2R 14911704 14911725 chr2R 14911827 14911847 6 122 3.0 1.5 2.2 1.9 143 chr2R 14911704 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911847 intron CG10249 - chr2R_6_14910001 chr2R_14910001 RAL-705 595 chr2R 14968439 14968450 chr2R 14968521 14968526 5 80 5.0 1.5 3.2 1.2 87 chr2R 14968439 intron ckn + chr2R 14968482 intron ckn + chr2R 14968526 intron ckn + chr2R_5_14965001 chr2R_14965001 RAL-705 596 chr2R 14979765 14979793 chr2R 14979841 14979869 13 76 2.0 3.5 2.8 3.4 104 chr2R 14979765 3` UTR ckn + chr2R 14979817 3` UTR ckn + chr2R 14979869 3` UTR ckn + chr2R_13_14975001 chr2R_14975001 RAL-705 597 chr2R 15004725 15004760 chr2R 15005054 15005089 jockey 14 329 1.5 2.5 2.0 4.7 364 chr2R 15004725 intergenic not near genes chr2R 15004907 intergenic not near genes chr2R 15005089 intergenic not near genes chr2R_14_15000001 chr2R_15000001 RAL-705 598 chr2R 15015459 15015467 chr2R 15022883 15022891 mdg1 4 7424 5.0 0.0 2.5 1.1 7432 chr2R 15015459 intron hbs + chr2R 15019175 intron hbs + chr2R 15022891 intron hbs + chr2R_4_15015001 chr2R_15015001 RAL-705 599 chr2R 15051085 15051109 chr2R 15051167 15051191 13 82 2.0 4.5 3.2 3.1 106 chr2R 15051085 intergenic not near genes chr2R 15051138 intergenic not near genes chr2R 15051191 intergenic not near genes chr2R_13_15050001 chr2R_15050001 RAL-705 600 chr2R 15084977 15085007 chr2R 15092026 15092054 297 12 7048 2.5 1.5 2.0 4.0 7077 chr2R 15084977 intergenic not near genes chr2R 15088516 intergenic not near genes chr2R 15092054 5` UTR CR44457 + chr2R_12_15085001 chr2R_15085001 RAL-705 601 chr2R 15094884 15094915 chr2R 15094961 15094992 7 77 1.0 1.5 1.2 3.2 108 chr2R 15094884 intergenic not near genes chr2R 15094938 intergenic not near genes chr2R 15094992 intergenic not near genes chr2R_7_15090001 chr2R_15090001 RAL-705 602 chr2R 15119319 15119351 chr2R 15127800 15127832 Tirant 5 8481 1.0 4.0 2.5 1.4 8513 chr2R 15119319 intron chn + chr2R 15123576 intron chn + chr2R 15127832 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-705 603 chr2R 15137969 15137997 chr2R 15138049 15138079 6 81 3.5 0.0 1.8 2.1 110 chr2R 15137969 intron chn + chr2R 15138024 intron chn + chr2R 15138079 intron chn + chr2R_6_15135001 chr2R_15135001 RAL-705 604 chr2R 15191431 15191441 chr2R 15191522 15191531 5 90 0.0 3.0 1.5 2.0 100 chr2R 15191431 intergenic not near genes chr2R 15191481 intergenic not near genes chr2R 15191531 intergenic not near genes chr2R_5_15190001 chr2R_15190001 RAL-705 605 chr2R 15373614 15373623 chr2R 15373690 15373698 5 75 0.5 2.0 1.2 2.3 84 chr2R 15373614 intergenic not near genes chr2R 15373656 intergenic not near genes chr2R 15373698 intergenic not near genes chr2R_5_15370001 chr2R_15370001 RAL-705 606 chr2R 15655984 15656011 chr2R 15656064 15656091 7 80 1.5 1.5 1.5 2.8 107 chr2R 15655984 intron CG42524 + chr2R 15656038 intron CG42524 + chr2R 15656091 intron CG42524 + chr2R_7_15655001 chr2R_15655001 RAL-705 607 chr2R 15679112 15679122 chr2R 15679195 15679206 5 84 2.0 2.5 2.2 1.6 94 chr2R 15679112 intergenic CG8207 -,Vha14-1 - chr2R 15679159 intergenic CG8207 -,Vha14-1 - chr2R 15679206 intergenic Vha14-1 -,CG8207 - chr2R_5_15675001 chr2R_15675001 RAL-705 608 chr2R 15720311 15720333 chr2R 15720504 15720526 15 194 5.0 2.0 3.5 3.3 215 chr2R 15720311 intergenic not near genes chr2R 15720418 intergenic not near genes chr2R 15720526 intergenic not near genes chr2R_15_15720001 chr2R_15720001 RAL-705 609 chr2R 15794869 15794901 chr2R 15794959 15794990 5 89 0.5 0.0 0.2 4.2 121 chr2R 15794869 intron,5` UTR Zasp52 -,tun + chr2R 15794930 intron,5` UTR Zasp52 -,tun + chr2R 15794990 intron,intron Zasp52 -,tun + chr2R_5_15790001 chr2R_15790001 RAL-705 610 chr2R 15833523 15833544 chr2R 15833609 15833631 4 86 3.5 2.0 2.8 1.1 108 chr2R 15833523 intron,intron tun +,Poxn - chr2R 15833577 intron,intron tun +,Poxn - chr2R 15833631 intron,intron tun +,Poxn - chr2R_4_15830001 chr2R_15830001 RAL-705 611 chr2R 15898877 15898902 chr2R 15898975 15899000 4 98 4.0 1.0 2.5 1.1 123 chr2R 15898877 intron sli - chr2R 15898938 intron sli - chr2R 15899000 intron sli - chr2R_4_15895001 chr2R_15895001 RAL-705 612 chr2R 15911034 15911068 chr2R 15911607 15911641 9 573 0.5 1.5 1.0 4.5 607 chr2R 15911034 intron sli - chr2R 15911338 intron sli - chr2R 15911641 intron sli - chr2R_9_15910001 chr2R_15910001 RAL-705 613 chr2R 16056622 16056651 chr2R 16056731 16056761 14 110 3.0 3.0 3.0 3.5 139 chr2R 16056622 exon CG8405 + chr2R 16056692 intron CG8405 + chr2R 16056761 intron CG8405 + chr2R_14_16055001 chr2R_16055001 RAL-705 614 chr2R 16119888 16119915 chr2R 16120011 16120039 6 124 5.0 1.5 3.2 1.4 151 chr2R 16119888 5` UTR Jhe + chr2R 16119964 intron Jhe + chr2R 16120039 intron Jhe + chr2R_6_16115001 chr2R_16115001 RAL-705 615 chr2R 16218606 16218641 chr2R 16218684 16218719 4 78 0.5 2.0 1.2 1.8 113 chr2R 16218606 intron mrj - chr2R 16218662 intron mrj - chr2R 16218719 intron mrj - chr2R_4_16215001 chr2R_16215001 RAL-705 616 chr2R 16245632 16245661 chr2R 16245720 16245749 10 88 3.0 3.0 3.0 2.5 117 chr2R 16245632 intron CngA - chr2R 16245690 intron CngA - chr2R 16245749 intron CngA - chr2R_10_16245001 chr2R_16245001 RAL-705 617 chr2R 16380121 16380156 chr2R 16380218 16380253 12 97 1.5 1.5 1.5 4.8 132 chr2R 16380121 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380187 3` UTR CR45317 - chr2R 16380253 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_12_16380001 chr2R_16380001 RAL-705 618 chr2R 16414468 16414495 chr2R 16414557 16414585 12 90 2.5 3.0 2.8 3.2 117 chr2R 16414468 intron Sema-2b + chr2R 16414526 intron Sema-2b + chr2R 16414585 intron Sema-2b + chr2R_12_16410001 chr2R_16410001 RAL-705 619 chr2R 16435910 16435931 chr2R 16435988 16436000 9 77 1.5 2.0 1.8 3.2 90 chr2R 16435910 5` UTR CG7848 - chr2R 16435955 intergenic CG7848 - chr2R 16436000 intergenic CG7848 - chr2R_9_16435001 chr2R_16435001 RAL-705 620 chr2R 16518048 16518065 chr2R 16518124 16518141 9 76 2.5 2.0 2.2 2.8 93 chr2R 16518048 intron Sema-2a + chr2R 16518094 intron Sema-2a + chr2R 16518141 intron Sema-2a + chr2R_9_16515001 chr2R_16515001 RAL-705 621 chr2R 16520586 16520605 chr2R 16520737 16520755 9 151 2.0 0.0 1.0 4.5 169 chr2R 16520586 intron Sema-2a + chr2R 16520670 intron Sema-2a + chr2R 16520755 intron Sema-2a + chr2R_9_16520001 chr2R_16520001 RAL-705 622 chr2R 16544857 16544865 chr2R 16544941 16544950 4 85 0.0 0.0 0.0 4.0 93 chr2R 16544857 intergenic not near genes chr2R 16544904 intergenic not near genes chr2R 16544950 intergenic not near genes chr2R_4_16540001 chr2R_16540001 RAL-705 623 chr2R 16737135 16737164 chr2R 16737235 16737264 9 100 4.0 1.0 2.5 2.6 129 chr2R 16737135 3` UTR CG43104 - chr2R 16737200 3` UTR CG43104 - chr2R 16737264 exon CG43104 - chr2R_9_16735001 chr2R_16735001 RAL-705 624 chr2R 16740886 16740911 chr2R 16740980 16741005 12 93 1.0 2.0 1.5 4.8 119 chr2R 16740886 intergenic not near genes chr2R 16740946 intergenic not near genes chr2R 16741005 intergenic not near genes chr2R_12_16740001 chr2R_16740001 RAL-705 625 chr2R 16775659 16775669 chr2R 16775926 16775936 5 267 3.0 1.5 2.2 1.6 277 chr2R 16775659 3` UTR Arp53D + chr2R 16775798 intergenic Arp53D + chr2R 16775936 intergenic Arp53D + chr2R_5_16775001 chr2R_16775001 RAL-705 626 chr2R 16808028 16808048 chr2R 16808132 16808152 6 104 1.5 2.5 2.0 2.0 124 chr2R 16808028 intergenic not near genes chr2R 16808090 intergenic not near genes chr2R 16808152 intergenic not near genes chr2R_6_16805001 chr2R_16805001 RAL-705 627 chr2R 16828477 16828491 chr2R 16828556 16828570 4 79 0.0 1.5 0.8 2.2 93 chr2R 16828477 intergenic not near genes chr2R 16828524 intergenic not near genes chr2R 16828570 intergenic not near genes chr2R_4_16825001 chr2R_16825001 RAL-705 628 chr2R 16918233 16918253 chr2R 16918310 16918329 4 77 3.0 1.5 2.2 1.2 96 chr2R 16918233 intergenic not near genes chr2R 16918281 intergenic not near genes chr2R 16918329 intergenic not near genes chr2R_4_16915001 chr2R_16915001 RAL-705 629 chr2R 17098657 17098663 chr2R 17098746 17098752 4 89 4.0 4.0 4.0 0.8 95 chr2R 17098657 intergenic GstS1 - chr2R 17098704 intergenic GstS1 - chr2R 17098752 intergenic GstS1 - chr2R_4_17095001 chr2R_17095001 RAL-705 630 chr2R 17147253 17147276 chr2R 17152284 17152307 jockey 10 5031 1.5 5.5 3.5 2.2 5054 chr2R 17147253 intergenic not near genes chr2R 17149780 intergenic not near genes chr2R 17152307 intergenic not near genes chr2R_10_17145001 chr2R_17145001 RAL-705 631 chr2R 17176362 17176384 chr2R 17182552 17182573 diver 7 6190 0.5 2.0 1.2 3.2 6211 chr2R 17176362 intergenic not near genes chr2R 17179468 intergenic not near genes chr2R 17182573 intergenic not near genes chr2R_7_17175001 chr2R_17175001 RAL-705 632 chr2R 17389271 17389301 chr2R 17389361 17389392 9 91 0.5 4.0 2.2 2.8 121 chr2R 17389271 intergenic CR44344 - chr2R 17389332 intergenic CR44344 - chr2R 17389392 intergenic CR44344 - chr2R_9_17385001 chr2R_17385001 RAL-705 633 chr2R 17478835 17478865 chr2R 17478913 17478943 7 78 1.0 2.5 1.8 2.5 108 chr2R 17478835 3` UTR,intron CG43110 -,veil + chr2R 17478889 3` UTR,intron CG43110 -,veil + chr2R 17478943 3` UTR,intron CG43110 -,veil + chr2R_7_17475001 chr2R_17475001 RAL-705 634 chr2R 17485917 17485950 chr2R 17490687 17490720 F-element 10 4770 2.0 2.0 2.0 3.3 4803 chr2R 17485917 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488318 intron NT5E-2 + chr2R 17490720 intron NT5E-2 + chr2R_10_17485001 chr2R_17485001 RAL-705 635 chr2R 17616981 17617008 chr2R 17617059 17617086 8 78 2.0 2.5 2.2 2.5 105 chr2R 17616981 intron,3` UTR CG10936 -,CG44403 - chr2R 17617034 intron,3` UTR CG10936 -,CG44403 - chr2R 17617086 intron,3` UTR CG10936 -,CG44403 - chr2R_8_17615001 chr2R_17615001 RAL-705 636 chr2R 17644011 17644017 chr2R 17644087 17644093 5 76 0.5 0.0 0.2 4.2 82 chr2R 17644011 intergenic not near genes chr2R 17644052 intergenic not near genes chr2R 17644093 intergenic not near genes chr2R_5_17640001 chr2R_17640001 RAL-705 637 chr2R 17784025 17784057 chr2R 17784266 17784298 pogo 10 241 1.5 2.5 2.0 3.3 273 chr2R 17784025 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784298 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-705 638 chr2R 17918161 17918192 chr2R 17918238 17918269 5 77 3.5 2.0 2.8 1.3 108 chr2R 17918161 intron Elk + chr2R 17918215 intron Elk + chr2R 17918269 intron Elk + chr2R_5_17915001 chr2R_17915001 RAL-705 639 chr2R 17982932 17982951 chr2R 17983017 17983036 4 85 1.5 3.0 2.2 1.2 104 chr2R 17982932 intron dpr13 - chr2R 17982984 intron dpr13 - chr2R 17983036 intron dpr13 - chr2R_4_17980001 chr2R_17980001 RAL-705 640 chr2R 18032747 18032756 chr2R 18032830 18032839 4 83 2.0 3.0 2.5 1.1 92 chr2R 18032747 intergenic not near genes chr2R 18032793 intergenic not near genes chr2R 18032839 intergenic not near genes chr2R_4_18030001 chr2R_18030001 RAL-705 641 chr2R 18045667 18045700 chr2R 18046019 18046052 jockey 7 352 1.5 0.0 0.8 3.9 385 chr2R 18045667 intergenic not near genes chr2R 18045860 intergenic not near genes chr2R 18046052 intergenic CG5767 - chr2R_7_18045001 chr2R_18045001 RAL-705 642 chr2R 18050485 18050489 chr2R 18051069 18051072 4 584 6.5 10.5 8.5 0.4 587 chr2R 18050485 exon Muc55B - chr2R 18050778 exon Muc55B - chr2R 18051072 exon Muc55B - chr2R_4_18050001 chr2R_18050001 RAL-705 643 chr2R 18111691 18111705 chr2R 18115559 18115572 F-element 6 3868 0.0 1.0 0.5 4.0 3881 chr2R 18111691 intergenic not near genes chr2R 18113632 intergenic not near genes chr2R 18115572 intergenic not near genes chr2R_6_18110001 chr2R_18110001 RAL-705 644 chr2R 18142917 18142919 chr2R 18143154 18143158 4 238 24.0 12.5 18.2 0.2 241 chr2R 18142917 intron,5` UTR pAbp +,snoRNA:Psi18S-1347a + chr2R 18143038 intron,5` UTR pAbp +,snoRNA:Psi18S-1347b + chr2R 18143158 intron pAbp + chr2R_4_18140001 chr2R_18140001 RAL-705 645 chr2R 18188523 18188545 chr2R 18188640 18188662 8 117 2.0 2.5 2.2 2.5 139 chr2R 18188523 intron CG33958 - chr2R 18188592 intron CG33958 - chr2R 18188662 intron CG33958 - chr2R_8_18185001 chr2R_18185001 RAL-705 646 chr2R 18224599 18224607 chr2R 18224679 18224687 4 80 6.0 1.0 3.5 0.9 88 chr2R 18224599 intergenic not near genes chr2R 18224643 intergenic not near genes chr2R 18224687 intergenic not near genes chr2R_4_18220001 chr2R_18220001 RAL-705 647 chr2R 18255699 18255721 chr2R 18255913 18255934 4 214 0.0 1.5 0.8 2.2 235 chr2R 18255699 intergenic not near genes chr2R 18255816 intergenic not near genes chr2R 18255934 intergenic not near genes chr2R_4_18255001 chr2R_18255001 RAL-705 648 chr2R 18289446 18289463 chr2R 18289548 18289565 6 102 0.5 4.5 2.5 1.7 119 chr2R 18289446 intron,intron sbb -,CG14502 + chr2R 18289506 intron,intron sbb -,CG14502 + chr2R 18289565 exon,intron sbb -,CG14502 + chr2R_6_18285001 chr2R_18285001 RAL-705 649 chr2R 18358395 18358421 chr2R 18372607 18372633 roo 6 14212 1.5 2.0 1.8 2.1 14238 chr2R 18358395 intergenic not near genes chr2R 18365514 intergenic not near genes chr2R 18372633 intergenic not near genes chr2R_6_18365001 chr2R_18365001 RAL-705 650 chr2R 18390881 18390886 chr2R 18390969 18390974 4 88 1.0 1.0 1.0 2.0 93 chr2R 18390881 intergenic CG15068 - chr2R 18390928 intergenic CG15068 - chr2R 18390974 intergenic CG15068 - chr2R_4_18390001 chr2R_18390001 RAL-705 651 chr2R 18405760 18405777 chr2R 18405841 18405858 6 81 1.0 2.5 1.8 2.1 98 chr2R 18405760 intergenic GstE6 +,GstE5 + chr2R 18405809 intergenic GstE6 +,GstE5 + chr2R 18405858 intergenic GstE6 + chr2R_6_18405001 chr2R_18405001 RAL-705 652 chr2R 18408283 18408310 chr2R 18408404 18408431 7 120 4.5 2.5 3.5 1.6 148 chr2R 18408283 exon GstE8 + chr2R 18408357 exon GstE8 + chr2R 18408431 exon GstE8 + chr2R_7_18405001 chr2R_18405001 RAL-705 653 chr2R 18433528 18433561 chr2R 18433621 18433655 8 94 4.0 3.5 3.8 1.7 127 chr2R 18433528 intron CG30118 - chr2R 18433592 intron CG30118 - chr2R 18433655 intron CG30118 - chr2R_8_18430001 chr2R_18430001 RAL-705 654 chr2R 18455827 18455853 chr2R 18456118 18456144 6 291 4.5 3.5 4.0 1.2 317 chr2R 18455827 intergenic not near genes chr2R 18455986 intergenic not near genes chr2R 18456144 intergenic CG30116 - chr2R_6_18455001 chr2R_18455001 RAL-705 655 chr2R 18528204 18528220 chr2R 18528288 18528304 6 84 3.5 2.0 2.8 1.6 100 chr2R 18528204 intron CG10924 + chr2R 18528254 intron CG10924 + chr2R 18528304 intron CG10924 + chr2R_6_18525001 chr2R_18525001 RAL-705 656 chr2R 18553744 18553762 chr2R 18553896 18553914 6 152 9.0 16.0 12.5 0.4 170 chr2R 18553744 intergenic GEFmeso - chr2R 18553829 intergenic GEFmeso - chr2R 18553914 intergenic GEFmeso - chr2R_6_18550001 chr2R_18550001 RAL-705 657 chr2R 18575805 18575831 chr2R 18581993 18582019 3S18 9 6187 4.0 4.0 4.0 1.8 6214 chr2R 18575805 intron GEFmeso - chr2R 18578912 intron GEFmeso - chr2R 18582019 intron GEFmeso - chr2R_9_18575001 chr2R_18575001 RAL-705 658 chr2R 18590874 18590895 chr2R 18600024 18600047 roo 8 9151 0.5 3.0 1.8 2.9 9173 chr2R 18590874 intron GEFmeso - chr2R 18595460 intron GEFmeso - chr2R 18600047 intron GEFmeso - chr2R_8_18595001 chr2R_18595001 RAL-705 659 chr2R 18605139 18605161 chr2R 18605231 18605252 8 92 1.0 3.0 2.0 2.7 113 chr2R 18605139 intron GEFmeso - chr2R 18605196 intron GEFmeso - chr2R 18605252 intron GEFmeso - chr2R_8_18605001 chr2R_18605001 RAL-705 660 chr2R 18646418 18646434 chr2R 18646563 18646579 9 145 2.0 2.5 2.2 2.8 161 chr2R 18646418 intron SP2637 - chr2R 18646498 intron SP2637 - chr2R 18646579 intron SP2637 - chr2R_9_18645001 chr2R_18645001 RAL-705 661 chr2R 18652336 18652352 chr2R 18652417 18652433 6 81 0.0 0.0 0.0 6.0 97 chr2R 18652336 intron SP2637 - chr2R 18652384 intron SP2637 - chr2R 18652433 intron SP2637 - chr2R_6_18650001 chr2R_18650001 RAL-705 662 chr2R 18738215 18738238 chr2R 18738291 18738314 9 76 2.5 2.5 2.5 2.6 99 chr2R 18738215 intron Hs3st-A + chr2R 18738264 intron Hs3st-A + chr2R 18738314 intron Hs3st-A + chr2R_9_18735001 chr2R_18735001 RAL-705 663 chr2R 18768934 18768953 chr2R 18769056 18769075 7 122 1.5 2.0 1.8 2.5 141 chr2R 18768934 intron Mctp + chr2R 18769004 intron Mctp + chr2R 18769075 intron Mctp + chr2R_7_18765001 chr2R_18765001 RAL-705 664 chr2R 18769728 18769735 chr2R 18769935 18769942 4 207 0.0 5.0 2.5 1.1 214 chr2R 18769728 intron Mctp + chr2R 18769835 intron Mctp + chr2R 18769942 intron Mctp + chr2R_4_18765001 chr2R_18765001 RAL-705 665 chr2R 18885709 18885738 chr2R 18886184 18886213 7 475 2.0 3.5 2.8 1.8 504 chr2R 18885709 intron sano + chr2R 18885961 intron sano + chr2R 18886213 intron sano + chr2R_7_18885001 chr2R_18885001 RAL-705 666 chr2R 18930457 18930484 chr2R 18930550 18930576 7 93 1.0 4.5 2.8 1.8 119 chr2R 18930457 intron sano + chr2R 18930516 intron sano + chr2R 18930576 intron sano + chr2R_7_18930001 chr2R_18930001 RAL-705 667 chr2R 18953165 18953178 chr2R 18953252 18953265 4 87 3.5 1.0 2.2 1.2 100 chr2R 18953165 intron sano + chr2R 18953215 intron sano + chr2R 18953265 intron sano + chr2R_4_18950001 chr2R_18950001 RAL-705 668 chr2R 18964928 18964953 chr2R 18965004 18965029 6 76 0.5 2.5 1.5 2.4 101 chr2R 18964928 intergenic not near genes chr2R 18964978 intergenic not near genes chr2R 18965029 intergenic not near genes chr2R_6_18960001 chr2R_18960001 RAL-705 669 chr2R 19026046 19026059 chr2R 19026186 19026199 6 140 2.5 0.0 1.2 2.7 153 chr2R 19026046 intron 5-HT1B - chr2R 19026122 intron 5-HT1B - chr2R 19026199 intron 5-HT1B - chr2R_6_19025001 chr2R_19025001 RAL-705 670 chr2R 19067734 19067753 chr2R 19067808 19067829 5 76 1.5 1.0 1.2 2.3 95 chr2R 19067734 intron 5-HT1A + chr2R 19067782 intron 5-HT1A + chr2R 19067829 intron 5-HT1A + chr2R_5_19065001 chr2R_19065001 RAL-705 671 chr2R 19072113 19072134 chr2R 19072187 19072209 8 75 4.5 2.0 3.2 1.9 96 chr2R 19072113 intron 5-HT1A + chr2R 19072161 intron 5-HT1A + chr2R 19072209 intron 5-HT1A + chr2R_8_19070001 chr2R_19070001 RAL-705 672 chr2R 19171379 19171391 chr2R 19171582 19171594 6 203 1.5 1.0 1.2 2.7 215 chr2R 19171379 intron CG10737 + chr2R 19171486 intron CG10737 + chr2R 19171594 intron CG10737 + chr2R_6_19170001 chr2R_19170001 RAL-705 673 chr2R 19300960 19300995 chr2R 19301043 19301078 13 83 3.0 4.0 3.5 2.9 118 chr2R 19300960 intron Tab2 + chr2R 19301019 intron Tab2 + chr2R 19301078 intron Tab2 + chr2R_13_19300001 chr2R_19300001 RAL-705 674 chr2R 19774011 19774039 chr2R 19774124 19774152 7 112 2.5 0.0 1.2 3.2 141 chr2R 19774011 intergenic not near genes chr2R 19774082 intergenic not near genes chr2R 19774152 intergenic not near genes chr2R_7_19770001 chr2R_19770001 RAL-705 675 chr2R 19776592 19776630 chr2R 19779915 19779953 jockey 9 3323 1.0 1.5 1.2 4.1 3361 chr2R 19776592 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779953 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-705 676 chr2R 19821177 19821209 chr2R 19821268 19821300 11 91 2.0 2.5 2.2 3.4 123 chr2R 19821177 intergenic not near genes chr2R 19821238 intergenic not near genes chr2R 19821300 intergenic not near genes chr2R_11_19820001 chr2R_19820001 RAL-705 677 chr2R 19909474 19909503 chr2R 19909553 19909582 12 79 3.0 1.5 2.2 3.8 108 chr2R 19909474 intergenic CR44573 - chr2R 19909528 intergenic CR44573 - chr2R 19909582 intergenic CR44573 - chr2R_12_19905001 chr2R_19905001 RAL-705 678 chr2R 19957432 19957448 chr2R 19962634 19962650 copia 6 5202 4.5 1.0 2.8 1.6 5218 chr2R 19957432 intergenic CG44623 + chr2R 19960041 intergenic not near genes chr2R 19962650 intergenic not near genes chr2R_6_19960001 chr2R_19960001 RAL-705 679 chr2R 20008184 20008210 chr2R 20008273 20008299 8 89 1.5 4.0 2.8 2.1 115 chr2R 20008184 intergenic not near genes chr2R 20008242 intergenic not near genes chr2R 20008299 intergenic not near genes chr2R_8_20005001 chr2R_20005001 RAL-705 680 chr2R 20009496 20009528 chr2R 20009575 20009607 7 79 1.5 4.0 2.8 1.8 111 chr2R 20009496 intergenic not near genes chr2R 20009552 intergenic not near genes chr2R 20009607 intergenic not near genes chr2R_7_20005001 chr2R_20005001 RAL-705 681 chr2R 20079861 20079870 chr2R 20079943 20079952 5 82 0.0 2.5 1.2 2.3 91 chr2R 20079861 intergenic not near genes chr2R 20079906 intergenic not near genes chr2R 20079952 intergenic not near genes chr2R_5_20075001 chr2R_20075001 RAL-705 682 chr2R 20080602 20080616 chr2R 20080679 20080693 7 77 0.0 6.0 3.0 1.8 91 chr2R 20080602 intergenic not near genes chr2R 20080648 intergenic not near genes chr2R 20080693 intergenic not near genes chr2R_7_20080001 chr2R_20080001 RAL-705 683 chr2R 20098922 20098944 chr2R 20099191 20099213 5 269 4.0 2.0 3.0 1.2 291 chr2R 20098922 intergenic not near genes chr2R 20099068 intergenic not near genes chr2R 20099213 intergenic not near genes chr2R_5_20095001 chr2R_20095001 RAL-705 684 chr2R 20223948 20223976 chr2R 20224033 20224061 6 85 2.0 0.5 1.2 2.7 113 chr2R 20223948 intergenic not near genes chr2R 20224004 intergenic not near genes chr2R 20224061 intergenic not near genes chr2R_6_20220001 chr2R_20220001 RAL-705 685 chr2R 20409971 20409987 chr2R 20410093 20410109 5 122 2.0 3.0 2.5 1.4 138 chr2R 20409971 intergenic not near genes chr2R 20410040 intergenic not near genes chr2R 20410109 intergenic not near genes chr2R_5_20410001 chr2R_20410001 RAL-705 686 chr2R 20441055 20441078 chr2R 20441143 20441166 6 88 0.5 3.0 1.8 2.1 111 chr2R 20441055 intron CG12484 + chr2R 20441110 intron CG12484 + chr2R 20441166 intron CG12484 + chr2R_6_20440001 chr2R_20440001 RAL-705 687 chr2R 20447050 20447064 chr2R 20447195 20447209 4 145 2.0 1.5 1.8 1.4 159 chr2R 20447050 intron CG12484 + chr2R 20447130 intron CG12484 + chr2R 20447209 intron CG12484 + chr2R_4_20445001 chr2R_20445001 RAL-705 688 chr2R 20578660 20578677 chr2R 20578749 20578766 5 89 3.0 3.0 3.0 1.2 106 chr2R 20578660 intron qsm - chr2R 20578713 intron qsm - chr2R 20578766 intron qsm - chr2R_5_20575001 chr2R_20575001 RAL-705 689 chr2R 20601718 20601754 chr2R 20601803 20601839 16 85 0.0 2.5 1.2 7.3 121 chr2R 20601718 intron bl + chr2R 20601778 intron bl + chr2R 20601839 intron bl + chr2R_16_20600001 chr2R_20600001 RAL-705 690 chr2R 20783316 20783331 chr2R 20788088 20788103 F-element 7 4772 2.0 5.0 3.5 1.6 4787 chr2R 20783316 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788103 intergenic CG43666 - chr2R_7_20785001 chr2R_20785001 RAL-705 691 chr2R 20833029 20833061 chr2R 20833112 20833144 10 83 1.0 4.0 2.5 2.9 115 chr2R 20833029 intron,intron insc -,sktl - chr2R 20833086 intron,intron insc -,sktl - chr2R 20833144 intron,intron insc -,sktl - chr2R_10_20830001 chr2R_20830001 RAL-705 692 chr2R 20904181 20904198 chr2R 20904344 20904361 5 163 2.5 1.5 2.0 1.7 180 chr2R 20904181 intergenic not near genes chr2R 20904271 intergenic not near genes chr2R 20904361 intergenic not near genes chr2R_5_20900001 chr2R_20900001 RAL-705 693 chr2R 20962910 20962938 chr2R 20963008 20963036 9 98 3.0 5.5 4.2 1.7 126 chr2R 20962910 intergenic not near genes chr2R 20962973 intergenic not near genes chr2R 20963036 intergenic not near genes chr2R_9_20960001 chr2R_20960001 RAL-705 694 chr2R 21060643 21060671 chr2R 21060725 21060753 7 82 4.0 3.5 3.8 1.5 110 chr2R 21060643 intergenic CG15653 -,mRpL54 + chr2R 21060698 intergenic mRpL54 +,CG15653 - chr2R 21060753 intergenic mRpL54 +,CG15653 - chr2R_7_21060001 chr2R_21060001 RAL-705 695 chr2R 21136525 21136544 chr2R 21136608 21136627 4 83 4.5 5.0 4.8 0.7 102 chr2R 21136525 intron Magi - chr2R 21136576 intron Magi - chr2R 21136627 intron Magi - chr2R_4_21135001 chr2R_21135001 RAL-705 696 chr2R 21176215 21176217 chr2R 21176788 21176790 4 573 8.5 0.0 4.2 0.8 575 chr2R 21176215 intron Pu + chr2R 21176502 intron Pu + chr2R 21176790 intron Pu + chr2R_4_21175001 chr2R_21175001 RAL-705 697 chr2R 21232646 21232657 chr2R 21232816 21232827 6 170 7.0 0.0 3.5 1.3 181 chr2R 21232646 intron ASPP - chr2R 21232736 intron ASPP - chr2R 21232827 intron ASPP - chr2R_6_21230001 chr2R_21230001 RAL-705 698 chr2R 21240378 21240404 chr2R 21240488 21240514 5 110 0.0 1.0 0.5 3.3 136 chr2R 21240378 intron ASPP - chr2R 21240446 intron ASPP - chr2R 21240514 intron ASPP - chr2R_5_21240001 chr2R_21240001 RAL-705 699 chr2R 21243025 21243044 chr2R 21243117 21243136 11 92 1.5 2.5 2.0 3.7 111 chr2R 21243025 intron ASPP - chr2R 21243080 intron ASPP - chr2R 21243136 intron ASPP - chr2R_11_21240001 chr2R_21240001 RAL-705 700 chr2R 21344443 21344465 chr2R 21344529 21344551 7 86 3.0 2.5 2.8 1.8 108 chr2R 21344443 exon CG15666 + chr2R 21344497 intron CG15666 + chr2R 21344551 intron CG15666 + chr2R_7_21340001 chr2R_21340001 RAL-705 701 chr2R 21417279 21417282 chr2R 21417380 21417383 4 101 5.0 0.0 2.5 1.1 104 chr2R 21417279 intron Sdc - chr2R 21417331 intron Sdc - chr2R 21417383 intron Sdc - chr2R_4_21415001 chr2R_21415001 RAL-705 702 chr2R 21472315 21472338 chr2R 21472393 21472416 7 78 2.0 2.5 2.2 2.2 101 chr2R 21472315 intron Sdc - chr2R 21472366 intron Sdc - chr2R 21472416 intron Sdc - chr2R_7_21470001 chr2R_21470001 RAL-705 703 chr2R 21585226 21585241 chr2R 21585305 21585320 8 78 1.0 2.5 1.8 2.9 94 chr2R 21585226 3` UTR CG30222 + chr2R 21585273 3` UTR CG30222 + chr2R 21585320 3` UTR CG30222 + chr2R_8_21585001 chr2R_21585001 RAL-705 704 chr2R 21681175 21681181 chr2R 21681258 21681264 5 83 1.5 3.0 2.2 1.6 89 chr2R 21681175 intron CG30263 + chr2R 21681220 intron CG30263 + chr2R 21681264 intron CG30263 + chr2R_5_21680001 chr2R_21680001 RAL-705 705 chr2R 21700153 21700181 chr2R 21700239 21700267 7 86 2.5 2.0 2.2 2.2 114 chr2R 21700153 intron HmgZ - chr2R 21700210 intron HmgZ - chr2R 21700267 intron HmgZ - chr2R_7_21700001 chr2R_21700001 RAL-705 706 chr2R 21736284 21736311 chr2R 21736366 21736393 9 82 1.0 2.5 1.8 3.2 109 chr2R 21736284 intergenic not near genes chr2R 21736338 intergenic not near genes chr2R 21736393 intergenic not near genes chr2R_9_21735001 chr2R_21735001 RAL-705 707 chr2R 21738277 21738299 chr2R 21747437 21747458 roo 5 9159 1.5 3.5 2.5 1.4 9181 chr2R 21738277 intergenic not near genes chr2R 21742868 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_5_21740001 chr2R_21740001 RAL-705 708 chr2R 21753091 21753108 chr2R 21753575 21753593 roo 8 485 2.0 1.5 1.8 2.9 502 chr2R 21753091 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753593 intergenic not near genes chr2R_8_21750001 chr2R_21750001 RAL-705 709 chr2R 21759560 21759590 chr2R 21759647 21759677 10 87 2.5 1.0 1.8 3.6 117 chr2R 21759560 intergenic not near genes chr2R 21759618 intergenic not near genes chr2R 21759677 intergenic not near genes chr2R_10_21755001 chr2R_21755001 RAL-705 710 chr2R 21792791 21792819 chr2R 21792869 21792896 7 78 2.0 0.5 1.2 3.2 105 chr2R 21792791 intergenic not near genes chr2R 21792844 intergenic not near genes chr2R 21792896 intergenic not near genes chr2R_7_21790001 chr2R_21790001 RAL-705 711 chr2R 21795101 21795123 chr2R 21795206 21795228 7 105 4.0 3.0 3.5 1.6 127 chr2R 21795101 intergenic not near genes chr2R 21795164 intergenic not near genes chr2R 21795228 intergenic not near genes chr2R_7_21795001 chr2R_21795001 RAL-705 712 chr2R 21797871 21797894 chr2R 21797947 21797968 7 76 1.5 0.0 0.8 3.9 97 chr2R 21797871 intergenic CG18735 - chr2R 21797920 intergenic CG18735 - chr2R 21797968 intergenic CG18735 - chr2R_7_21795001 chr2R_21795001 RAL-705 713 chr2R 21803873 21803904 chr2R 21803955 21803986 10 82 0.0 1.5 0.8 5.6 113 chr2R 21803873 5` UTR CR9284 + chr2R 21803930 5` UTR CR9284 + chr2R 21803986 5` UTR CR9284 + chr2R_10_21800001 chr2R_21800001 RAL-705 714 chr2R 21809530 21809555 chr2R 21817769 21817795 roo 8 8240 2.0 3.0 2.5 2.3 8265 chr2R 21809530 intergenic not near genes chr2R 21813662 intergenic not near genes chr2R 21817795 intergenic not near genes chr2R_8_21810001 chr2R_21810001 RAL-705 715 chr2R 21832423 21832453 chr2R 21832829 21832859 6 406 4.0 1.5 2.8 1.6 436 chr2R 21832423 intergenic CG34040 - chr2R 21832641 exon CG34040 - chr2R 21832859 exon CG34040 - chr2R_6_21830001 chr2R_21830001 RAL-705 716 chr2R 21906294 21906303 chr2R 21906395 21906404 6 101 1.0 6.0 3.5 1.3 110 chr2R 21906294 intron Fili + chr2R 21906349 intron Fili + chr2R 21906404 intron Fili + chr2R_6_21905001 chr2R_21905001 RAL-705 717 chr2R 21932247 21932267 chr2R 21932325 21932342 10 77 6.5 2.5 4.5 1.8 95 chr2R 21932247 intron Fili + chr2R 21932294 intron Fili + chr2R 21932342 intron Fili + chr2R_10_21930001 chr2R_21930001 RAL-705 718 chr2R 22116669 22116687 chr2R 22116759 22116778 5 91 4.5 2.0 3.2 1.2 109 chr2R 22116669 intron Vrp1 - chr2R 22116724 intron Vrp1 - chr2R 22116778 intron Vrp1 - chr2R_5_22115001 chr2R_22115001 RAL-705 719 chr2R 22185675 22185699 chr2R 22185774 22185798 6 99 0.5 0.0 0.2 5.0 123 chr2R 22185675 3` UTR MED16 + chr2R 22185736 3` UTR MED16 + chr2R 22185798 3` UTR MED16 + chr2R_6_22185001 chr2R_22185001 RAL-705 720 chr2R 22189444 22189464 chr2R 22189571 22189591 5 127 2.5 4.5 3.5 1.1 147 chr2R 22189444 3` UTR Vps35 + chr2R 22189518 3` UTR Vps35 + chr2R 22189591 3` UTR Vps35 + chr2R_5_22185001 chr2R_22185001 RAL-705 721 chr2R 22290084 22290100 chr2R 22290168 22290184 5 84 2.5 1.5 2.0 1.7 100 chr2R 22290084 intergenic not near genes chr2R 22290134 intergenic not near genes chr2R 22290184 intergenic not near genes chr2R_5_22290001 chr2R_22290001 RAL-705 722 chr2R 22334480 22334505 chr2R 22334557 22334581 5 77 2.0 2.5 2.2 1.6 101 chr2R 22334480 exon Liprin-gamma - chr2R 22334530 exon Liprin-gamma - chr2R 22334581 exon Liprin-gamma - chr2R_5_22330001 chr2R_22330001 RAL-705 723 chr2R 22349693 22349719 chr2R 22351477 22351500 jockey 4 1783 2.0 0.5 1.2 1.8 1807 chr2R 22349693 intron Liprin-gamma - chr2R 22350596 intron Liprin-gamma - chr2R 22351500 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 RAL-705 724 chr2R 22360380 22360393 chr2R 22360813 22360826 jockey 6 433 2.0 2.5 2.2 1.9 446 chr2R 22360380 intron Liprin-gamma - chr2R 22360603 intron Liprin-gamma - chr2R 22360826 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-705 725 chr2R 22525751 22525772 chr2R 22529305 22529327 jockey 10 3555 5.5 4.0 4.8 1.7 3576 chr2R 22525751 intron px - chr2R 22527539 intron px - chr2R 22529327 intron px - chr2R_10_22525001 chr2R_22525001 RAL-705 726 chr2R 22579600 22579634 chr2R 22579686 22579720 7 86 2.0 1.5 1.8 2.5 120 chr2R 22579600 intron dnr1 - chr2R 22579660 intron dnr1 - chr2R 22579720 intron dnr1 - chr2R_7_22575001 chr2R_22575001 RAL-705 727 chr2R 22723237 22723266 chr2R 22723313 22723342 5 76 0.0 2.5 1.2 2.3 105 chr2R 22723237 intron jbug - chr2R 22723290 intron jbug - chr2R 22723342 intron jbug - chr2R_5_22720001 chr2R_22720001 RAL-705 728 chr2R 22767566 22767600 chr2R 22767651 22767685 9 85 3.0 2.5 2.8 2.4 119 chr2R 22767566 intron CG42260 - chr2R 22767626 intron CG42260 - chr2R 22767685 intron CG42260 - chr2R_9_22765001 chr2R_22765001 RAL-705 729 chr2R 22774959 22774985 chr2R 22775378 22775404 jockey 12 419 2.5 3.5 3.0 3.0 445 chr2R 22774959 intron CG42260 - chr2R 22775182 intron CG42260 - chr2R 22775404 intron CG42260 - chr2R_12_22775001 chr2R_22775001 RAL-705 730 chr2R 22785729 22785759 chr2R 22785806 22785837 8 78 0.5 1.0 0.8 4.4 108 chr2R 22785729 intron CG42260 - chr2R 22785783 intron CG42260 - chr2R 22785837 intron CG42260 - chr2R_8_22785001 chr2R_22785001 RAL-705 731 chr2R 22907402 22907430 chr2R 22907494 22907523 11 93 4.5 2.5 3.5 2.4 121 chr2R 22907402 intron nahoda + chr2R 22907462 intron nahoda + chr2R 22907523 intron nahoda + chr2R_11_22905001 chr2R_22905001 RAL-705 732 chr2R 22945059 22945080 chr2R 22945172 22945194 11 113 2.5 4.0 3.2 2.6 135 chr2R 22945059 exon CG42694 + chr2R 22945126 3` UTR CG42694 + chr2R 22945194 intergenic CG42694 + chr2R_11_22945001 chr2R_22945001 RAL-705 733 chr2R 23000148 23000175 chr2R 23000233 23000260 6 85 2.5 2.5 2.5 1.7 112 chr2R 23000148 intron twi + chr2R 23000204 intron twi + chr2R 23000260 intron twi + chr2R_6_23000001 chr2R_23000001 RAL-705 734 chr2R 23052658 23052686 chr2R 23052734 23052762 8 76 5.0 3.5 4.2 1.5 104 chr2R 23052658 intergenic not near genes chr2R 23052710 intergenic not near genes chr2R 23052762 intergenic not near genes chr2R_8_23050001 chr2R_23050001 RAL-705 735 chr2R 23155721 23155753 chr2R 23155846 23155879 15 126 2.0 2.5 2.2 4.7 158 chr2R 23155721 intron CG9899 + chr2R 23155800 intron CG9899 + chr2R 23155879 intron CG9899 + chr2R_15_23155001 chr2R_23155001 RAL-705 736 chr2R 23184268 23184295 chr2R 23184349 23184378 4 85 0.5 2.5 1.5 1.6 110 chr2R 23184268 intron,intron CG34371 -,CG13539 + chr2R 23184323 intron,intron CG34371 -,CG13539 + chr2R 23184378 intron,intron CG34371 -,CG13539 + chr2R_4_23180001 chr2R_23180001 RAL-705 737 chr2R 23186573 23186602 chr2R 23186651 23186680 11 78 1.0 2.0 1.5 4.4 107 chr2R 23186573 intron CG34371 - chr2R 23186626 intron CG34371 - chr2R 23186680 intron CG34371 - chr2R_11_23185001 chr2R_23185001 RAL-705 738 chr2R 23191756 23191775 chr2R 23192388 23192410 5 634 0.0 2.0 1.0 2.5 654 chr2R 23191756 intron CG34371 - chr2R 23192083 intron CG34371 - chr2R 23192410 intron CG34371 - chr2R_5_23190001 chr2R_23190001 RAL-705 739 chr2R 23236822 23236838 chr2R 23236914 23236930 4 92 0.0 0.0 0.0 4.0 108 chr2R 23236822 intergenic not near genes chr2R 23236876 intergenic not near genes chr2R 23236930 intergenic not near genes chr2R_4_23235001 chr2R_23235001 RAL-705 740 chr2R 23356274 23356301 chr2R 23356362 23356390 8 88 4.5 1.5 3.0 2.0 116 chr2R 23356274 3` UTR Rpi + chr2R 23356332 3` UTR Rpi + chr2R 23356390 3` UTR,3` UTR Rpi +,CG3500 - chr2R_8_23355001 chr2R_23355001 RAL-705 741 chr2R 23402612 23402636 chr2R 23407687 23407711 flea 7 5075 2.0 4.0 3.0 1.8 5099 chr2R 23402612 intergenic CG3520 - chr2R 23405162 intergenic not near genes chr2R 23407711 intergenic not near genes chr2R_7_23405001 chr2R_23405001 RAL-705 742 chr2R 23429211 23429240 chr2R 23429436 23429465 6 224 2.5 1.5 2.0 2.0 254 chr2R 23429211 intron CG9815 - chr2R 23429338 intron CG9815 - chr2R 23429465 intron CG9815 - chr2R_6_23425001 chr2R_23425001 RAL-705 743 chr2R 23437230 23437239 chr2R 23437307 23437316 8 77 3.5 3.5 3.5 1.8 86 chr2R 23437230 intergenic not near genes chr2R 23437273 intergenic not near genes chr2R 23437316 intergenic not near genes chr2R_8_23435001 chr2R_23435001 RAL-705 744 chr2R 23500361 23500375 chr2R 23500626 23500640 5 265 1.0 2.0 1.5 2.0 279 chr2R 23500361 3` UTR CG13558 + chr2R 23500500 3` UTR CG13558 + chr2R 23500640 3` UTR CG13558 + chr2R_5_23500001 chr2R_23500001 RAL-705 745 chr2R 23529577 23529605 chr2R 23537153 23537181 412 6 7576 2.5 2.5 2.5 1.7 7604 chr2R 23529577 intron bw - chr2R 23533379 intron bw - chr2R 23537181 exon bw - chr2R_6_23530001 chr2R_23530001 RAL-705 746 chr2R 23607035 23607192 chr2R 23607116 23607285 25 85 4.0 2.5 3.2 6.0 250 chr2R 23607035 intron CG17664 - chr2R 23607160 intron CG17664 - chr2R 23607285 intron CG17664 - chr2R_25_23605001 chr2R_23605001 RAL-705 747 chr2R 23662380 23662403 chr2R 23662462 23662483 5 82 1.5 3.5 2.5 1.4 103 chr2R 23662380 intron Pde8 + chr2R 23662432 intron Pde8 + chr2R 23662483 intron Pde8 + chr2R_5_23660001 chr2R_23660001 RAL-705 748 chr2R 23802303 23802311 chr2R 23802406 23802414 6 103 4.0 6.0 5.0 1.0 111 chr2R 23802303 3` UTR CG30177 + chr2R 23802358 3` UTR CG30177 + chr2R 23802414 3` UTR CG30177 + chr2R_6_23800001 chr2R_23800001 RAL-705 749 chr2R 23821934 23821958 chr2R 23822015 23822038 9 81 0.0 3.0 1.5 3.6 104 chr2R 23821934 intron CG5549 + chr2R 23821986 intron CG5549 + chr2R 23822038 intron CG5549 + chr2R_9_23820001 chr2R_23820001 RAL-705 750 chr2R 23914300 23914330 chr2R 23921923 23921951 412 9 7623 2.5 4.5 3.5 2.0 7651 chr2R 23914300 exon kcc + chr2R 23918126 intron kcc + chr2R 23921951 intron kcc + chr2R_9_23915001 chr2R_23915001 RAL-705 751 chr2R 24031391 24031413 chr2R 24031474 24031496 13 83 2.0 6.5 4.2 2.5 105 chr2R 24031391 5` UTR CG30172 - chr2R 24031444 intergenic CG30172 -,Chi - chr2R 24031496 intergenic Chi -,CG30172 - chr2R_13_24030001 chr2R_24030001 RAL-705 752 chr2R 24077937 24077955 chr2R 24078013 24078031 4 76 1.0 6.0 3.5 0.9 94 chr2R 24077937 3` UTR Mlp60A + chr2R 24077984 3` UTR Mlp60A + chr2R 24078031 3` UTR Mlp60A + chr2R_4_24075001 chr2R_24075001 RAL-705 753 chr2R 24147068 24147098 chr2R 24154644 24154676 412 11 7577 3.0 1.5 2.2 3.4 7608 chr2R 24147068 intron Dat + chr2R 24150872 intron Dat + chr2R 24154676 intron Dat + chr2R_11_24150001 chr2R_24150001 RAL-705 754 chr2R 24177236 24177263 chr2R 24184721 24184748 412 12 7485 2.5 2.5 2.5 3.4 7512 chr2R 24177236 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184748 3` UTR Nop60B + chr2R_12_24180001 chr2R_24180001 RAL-705 755 chr2R 24313391 24313403 chr2R 24313474 24313486 8 83 3.0 5.0 4.0 1.6 95 chr2R 24313391 intergenic betaTub60D + chr2R 24313438 intergenic betaTub60D + chr2R 24313486 intergenic betaTub60D + chr2R_8_24310001 chr2R_24310001 RAL-705 756 chr2R 24353429 24353457 chr2R 24361791 24361819 roo 7 8362 2.0 4.0 3.0 1.8 8390 chr2R 24353429 intron,intron bs +,CR44811 - chr2R 24357624 intron,intron bs +,CR44811 - chr2R 24361819 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 RAL-705 757 chr2R 24430922 24430939 chr2R 24431009 24431027 5 87 0.0 2.5 1.2 2.3 105 chr2R 24430922 intergenic CG15873 -,Pgam5-2 - chr2R 24430974 intergenic CG15873 -,Pgam5-2 - chr2R 24431027 intergenic Pgam5-2 -,CG15873 - chr2R_5_24430001 chr2R_24430001 RAL-705 758 chr2R 24590112 24590144 chr2R 24590204 24590235 11 92 1.5 3.0 2.2 3.4 123 chr2R 24590112 intron pio + chr2R 24590174 intron pio + chr2R 24590235 intron pio + chr2R_11_24590001 chr2R_24590001 RAL-705 759 chr2R 24632892 24632920 chr2R 24633129 24633157 9 236 0.5 2.0 1.2 4.1 265 chr2R 24632892 intron,3` UTR,3` UTR CG13594 -,CR43787 -,Cyp9c1 + chr2R 24633024 intron CG13594 - chr2R 24633157 intron CG13594 - chr2R_9_24630001 chr2R_24630001 RAL-705 760 chr2R 24633765 24633794 chr2R 24633903 24633932 13 139 35.5 29.0 32.2 0.4 167 chr2R 24633765 intron CG13594 - chr2R 24633848 intron CG13594 - chr2R 24633932 intron CG13594 - chr2R_13_24630001 chr2R_24630001 RAL-705 761 chr2R 24660348 24660370 chr2R 24660464 24660486 7 116 2.5 2.0 2.2 2.2 138 chr2R 24660348 intergenic not near genes chr2R 24660417 intergenic not near genes chr2R 24660486 intergenic not near genes chr2R_7_24660001 chr2R_24660001 RAL-705 762 chr2R 24719799 24719819 chr2R 24719911 24719931 8 111 4.0 6.5 5.2 1.3 132 chr2R 24719799 intron Mid1 - chr2R 24719865 intron Mid1 - chr2R 24719931 intron Mid1 - chr2R_8_24715001 chr2R_24715001 RAL-705 763 chr2R 24727883 24727918 chr2R 24735391 24735424 mdg1 14 7507 1.5 3.0 2.2 4.4 7541 chr2R 24727883 intron Mid1 - chr2R 24731654 intron Mid1 - chr2R 24735424 intron Mid1 - chr2R_14_24730001 chr2R_24730001 RAL-705 764 chr2R 24763611 24763643 chr2R 24765584 24765619 G2 10 1976 4.0 2.0 3.0 2.5 2008 chr2R 24763611 exon CG3894 + chr2R 24764615 intron CG3894 + chr2R 24765619 exon CG3894 + chr2R_10_24760001 chr2R_24760001 RAL-705 765 chr2R 25061337 25061364 chr2R 25061420 25061447 9 82 1.0 0.5 0.8 5.0 110 chr2R 25061337 intergenic not near genes chr2R 25061392 intergenic not near genes chr2R 25061447 intergenic not near genes chr2R_9_25060001 chr2R_25060001 RAL-705 766 chr2R 25081734 25081763 chr2R 25081882 25081911 7 148 2.0 1.5 1.8 2.5 177 chr2R 25081734 intron gol - chr2R 25081822 intron gol - chr2R 25081911 intron gol - chr2R_7_25080001 chr2R_25080001 RAL-705 767 chr2R 25101275 25101302 chr2R 25101377 25101404 9 102 4.5 2.5 3.5 2.0 129 chr2R 25101275 intron lov - chr2R 25101340 intron lov - chr2R 25101404 intron lov - chr2R_9_25100001 chr2R_25100001 RAL-705 768 chr2R 25102521 25102549 chr2R 25102690 25102718 7 169 2.5 1.5 2.0 2.3 197 chr2R 25102521 intron lov - chr2R 25102620 intron lov - chr2R 25102718 intron lov - chr2R_7_25100001 chr2R_25100001 RAL-705 769 chr2R 25104794 25104809 chr2R 25104919 25104934 6 125 2.0 3.0 2.5 1.7 140 chr2R 25104794 intron lov - chr2R 25104864 intron lov - chr2R 25104934 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-705 770 chr2R 25131028 25131039 chr2R 25131105 25131116 5 77 2.5 3.0 2.8 1.3 88 chr2R 25131028 intron lov - chr2R 25131072 intron lov - chr2R 25131116 intron lov - chr2R_5_25130001 chr2R_25130001 RAL-705 771 chr2R 25141648 25141665 chr2R 25159338 25159355 roo 8 17689 2.5 4.0 3.2 1.9 17707 chr2R 25141648 intergenic not near genes chr2R 25150502 intergenic not near genes chr2R 25159355 intergenic not near genes chr2R_8_25150001 chr2R_25150001 RAL-705 772 chr2R 25171496 25171515 chr2R 25171573 25171592 4 77 1.0 1.0 1.0 2.0 96 chr2R 25171496 intergenic not near genes chr2R 25171544 intergenic not near genes chr2R 25171592 intergenic not near genes chr2R_4_25170001 chr2R_25170001 RAL-705 773 chr2R 25193342 25193358 chr2R 25193484 25193500 6 142 2.0 1.0 1.5 2.4 158 chr2R 25193342 intron CG9380 - chr2R 25193421 intron CG9380 - chr2R 25193500 intron CG9380 - chr2R_6_25190001 chr2R_25190001 RAL-705 774 chr2R 25243977 25244001 chr2R 25244052 25244079 7 78 1.5 1.5 1.5 2.8 102 chr2R 25243977 intron CG9380 - chr2R 25244028 intron CG9380 - chr2R 25244079 intron CG9380 - chr2R_7_25240001 chr2R_25240001 RAL-705 775 chr3L 33177 33457 chr3L 33388 33556 8 127 1.5 3.5 2.5 2.3 379 chr3L 33177 intergenic not near genes chr3L 33366 intergenic not near genes chr3L 33556 intergenic not near genes chr3L_8_30001 chr3L_30001 RAL-705 776 chr3L 46353 46361 chr3L 46800 46808 6 447 2.0 4.5 3.2 1.4 455 chr3L 46353 intergenic not near genes chr3L 46580 intergenic not near genes chr3L 46808 intergenic not near genes chr3L_6_45001 chr3L_45001 RAL-705 777 chr3L 71933 71959 chr3L 72014 72042 5 82 2.0 1.5 1.8 1.8 109 chr3L 71933 intergenic CR43988 - chr3L 71988 intergenic CR43988 - chr3L 72042 intergenic CR43988 - chr3L_5_70001 chr3L_70001 RAL-705 778 chr3L 110210 110235 chr3L 119376 119402 roo 8 9167 4.0 1.5 2.8 2.1 9192 chr3L 110210 intergenic not near genes chr3L 114806 intergenic not near genes chr3L 119402 intergenic not near genes chr3L_8_110001 chr3L_110001 RAL-705 779 chr3L 180497 180523 chr3L 180746 180772 6 249 3.0 3.0 3.0 1.5 275 chr3L 180497 intron CG13875 + chr3L 180634 intron CG13875 + chr3L 180772 5` UTR CG13875 + chr3L_6_180001 chr3L_180001 RAL-705 780 chr3L 361889 361912 chr3L 361969 361992 7 80 3.0 2.5 2.8 1.8 103 chr3L 361889 exon CG1233 + chr3L 361940 exon CG1233 + chr3L 361992 exon CG1233 + chr3L_7_360001 chr3L_360001 RAL-705 781 chr3L 375268 375278 chr3L 375349 375362 5 83 0.0 3.5 1.8 1.8 94 chr3L 375268 intron trh - chr3L 375315 intron trh - chr3L 375362 intron trh - chr3L_5_375001 chr3L_375001 RAL-705 782 chr3L 402688 402715 chr3L 409740 409768 297 9 7052 1.0 2.5 1.8 3.2 7080 chr3L 402688 intergenic not near genes chr3L 406228 intergenic not near genes chr3L 409768 intergenic not near genes chr3L_9_405001 chr3L_405001 RAL-705 783 chr3L 416144 416159 chr3L 416232 416247 6 88 5.5 3.5 4.5 1.1 103 chr3L 416144 intergenic not near genes chr3L 416196 intergenic not near genes chr3L 416247 intergenic not near genes chr3L_6_415001 chr3L_415001 RAL-705 784 chr3L 456208 456235 chr3L 456287 456314 11 79 0.0 1.0 0.5 7.3 106 chr3L 456208 intron klar - chr3L 456261 intron klar - chr3L 456314 intron klar - chr3L_11_455001 chr3L_455001 RAL-705 785 chr3L 459988 460008 chr3L 460064 460085 12 77 0.5 4.0 2.2 3.8 97 chr3L 459988 intron klar - chr3L 460036 intron klar - chr3L 460085 intron klar - chr3L_12_460001 chr3L_460001 RAL-705 786 chr3L 514281 514306 chr3L 514358 514380 8 76 1.0 4.5 2.8 2.1 99 chr3L 514281 intron klar - chr3L 514330 intron klar - chr3L 514380 intron klar - chr3L_8_510001 chr3L_510001 RAL-705 787 chr3L 563971 563995 chr3L 564150 564173 4 179 3.0 2.5 2.8 1.1 202 chr3L 563971 intron hipk + chr3L 564072 intron hipk + chr3L 564173 intron hipk + chr3L_4_560001 chr3L_560001 RAL-705 788 chr3L 642483 642500 chr3L 642574 642590 5 91 3.5 2.5 3.0 1.2 107 chr3L 642483 5` UTR CR43334 + chr3L 642536 5` UTR CR43334 + chr3L 642590 5` UTR CR43334 + chr3L_5_640001 chr3L_640001 RAL-705 789 chr3L 651387 651424 chr3L 651475 651512 14 88 1.5 4.0 2.8 3.7 125 chr3L 651387 intergenic Gale +,CG3402 - chr3L 651450 intergenic CG3402 -,Gale + chr3L 651512 intergenic CG3402 -,Gale + chr3L_14_650001 chr3L_650001 RAL-705 790 chr3L 671733 671740 chr3L 671824 671831 4 91 1.5 1.0 1.2 1.8 98 chr3L 671733 intergenic not near genes chr3L 671782 intergenic not near genes chr3L 671831 intergenic not near genes chr3L_4_670001 chr3L_670001 RAL-705 791 chr3L 705903 705920 chr3L 705999 706016 6 96 3.0 3.0 3.0 1.5 113 chr3L 705903 intergenic CG13895 -,CR44514 + chr3L 705960 3` UTR CG13895 - chr3L 706016 3` UTR CG13895 - chr3L_6_705001 chr3L_705001 RAL-705 792 chr3L 712474 712488 chr3L 712717 712733 4 245 2.0 2.5 2.2 1.2 259 chr3L 712474 intergenic not near genes chr3L 712604 intergenic not near genes chr3L 712733 intergenic not near genes chr3L_4_710001 chr3L_710001 RAL-705 793 chr3L 713071 713082 chr3L 713159 713172 4 89 2.0 2.5 2.2 1.2 101 chr3L 713071 intergenic not near genes chr3L 713122 intergenic not near genes chr3L 713172 intergenic not near genes chr3L_4_710001 chr3L_710001 RAL-705 794 chr3L 813910 813925 chr3L 814020 814037 6 111 2.0 1.0 1.5 2.4 127 chr3L 813910 5` UTR CR44537 + chr3L 813974 5` UTR CR44537 + chr3L 814037 5` UTR CR44537 + chr3L_6_810001 chr3L_810001 RAL-705 795 chr3L 857999 858021 chr3L 866480 866502 Tirant 5 8481 0.5 2.0 1.2 2.3 8503 chr3L 857999 intergenic not near genes chr3L 862250 intergenic not near genes chr3L 866502 5` UTR CG12502 + chr3L_5_860001 chr3L_860001 RAL-705 796 chr3L 899996 900011 chr3L 900080 900095 4 84 0.0 4.5 2.2 1.2 99 chr3L 899996 intergenic not near genes chr3L 900046 intergenic not near genes chr3L 900095 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-705 797 chr3L 922175 922180 chr3L 922252 922257 4 76 7.5 1.0 4.2 0.8 82 chr3L 922175 intron Glut1 + chr3L 922216 intron Glut1 + chr3L 922257 intron Glut1 + chr3L_4_920001 chr3L_920001 RAL-705 798 chr3L 925174 925206 chr3L 932600 932632 mdg1 12 7426 1.0 1.0 1.0 6.0 7458 chr3L 925174 intron Glut1 + chr3L 928903 intron Glut1 + chr3L 932632 intron Glut1 + chr3L_12_925001 chr3L_925001 RAL-705 799 chr3L 939770 939802 chr3L 940891 940923 jockey 14 1121 2.0 2.5 2.2 4.4 1153 chr3L 939770 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940923 intron Glut1 + chr3L_14_940001 chr3L_940001 RAL-705 800 chr3L 961034 961044 chr3L 961127 961137 4 93 3.0 2.5 2.8 1.1 103 chr3L 961034 intron Glut1 + chr3L 961086 intron Glut1 + chr3L 961137 intron Glut1 + chr3L_4_960001 chr3L_960001 RAL-705 801 chr3L 1015028 1015054 chr3L 1015140 1015166 8 112 2.0 2.5 2.2 2.5 138 chr3L 1015028 intron trio - chr3L 1015097 intron trio - chr3L 1015166 intron trio - chr3L_8_1015001 chr3L_1015001 RAL-705 802 chr3L 1021375 1021406 chr3L 1021455 1021486 10 80 1.0 2.5 1.8 3.6 111 chr3L 1021375 intron trio - chr3L 1021430 intron trio - chr3L 1021486 intron trio - chr3L_10_1020001 chr3L_1020001 RAL-705 803 chr3L 1031577 1031614 chr3L 1031653 1031689 7 75 4.0 3.5 3.8 1.5 112 chr3L 1031577 intron trio - chr3L 1031633 intron trio - chr3L 1031689 intron trio - chr3L_7_1030001 chr3L_1030001 RAL-705 804 chr3L 1055804 1055824 chr3L 1056202 1056223 6 399 1.5 3.5 2.5 1.7 419 chr3L 1055804 intron bab1 - chr3L 1056014 intron bab1 - chr3L 1056223 intron bab1 - chr3L_6_1055001 chr3L_1055001 RAL-705 805 chr3L 1103992 1104011 chr3L 1104183 1104201 5 191 2.0 3.0 2.5 1.4 209 chr3L 1103992 intergenic not near genes chr3L 1104096 intergenic not near genes chr3L 1104201 intergenic not near genes chr3L_5_1100001 chr3L_1100001 RAL-705 806 chr3L 1109632 1109662 chr3L 1109720 1109749 9 88 2.5 1.5 2.0 3.0 117 chr3L 1109632 intergenic not near genes chr3L 1109690 intergenic not near genes chr3L 1109749 intergenic not near genes chr3L_9_1105001 chr3L_1105001 RAL-705 807 chr3L 1154130 1154162 chr3L 1163280 1163312 roo 9 9150 1.0 2.0 1.5 3.6 9182 chr3L 1154130 intron bab2 - chr3L 1158721 intron bab2 - chr3L 1163312 intron bab2 - chr3L_9_1155001 chr3L_1155001 RAL-705 808 chr3L 1219599 1219623 chr3L 1227332 1227356 412 5 7733 2.0 4.0 3.0 1.2 7757 chr3L 1219599 intron mwh + chr3L 1223478 intron mwh + chr3L 1227356 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-705 809 chr3L 1415776 1415808 chr3L 1415858 1415890 11 81 2.0 2.0 2.0 3.7 114 chr3L 1415776 intron Ptp61F - chr3L 1415833 intron Ptp61F - chr3L 1415890 intron Ptp61F - chr3L_11_1415001 chr3L_1415001 RAL-705 810 chr3L 1505995 1506029 chr3L 1513592 1513624 17.6 12 7596 1.5 2.5 2.0 4.0 7629 chr3L 1505995 intron,intron Psa +,cue - chr3L 1509810 intron,intron Psa +,cue - chr3L 1513624 intron,intron Psa +,cue - chr3L_12_1505001 chr3L_1505001 RAL-705 811 chr3L 1600185 1600187 chr3L 11777678 11777678 4 10177492 4.0 8.0 6.0 0.6 10177493 chr3L 1600185 3` UTR CG13917 + chr3L 6688932 intergenic SP1173 - chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_6685001 chr3L_6685001 RAL-705 812 chr3L 1639225 1639240 chr3L 1639406 1639421 10 181 3.0 4.0 3.5 2.2 196 chr3L 1639225 5` UTR metl - chr3L 1639323 intergenic metl -,Bgb + chr3L 1639421 intergenic metl -,Bgb + chr3L_10_1635001 chr3L_1635001 RAL-705 813 chr3L 1740862 1740875 chr3L 1741105 1741118 pogo 4 243 4.0 2.5 3.2 1.0 256 chr3L 1740862 intron Gk + chr3L 1740990 intron Gk + chr3L 1741118 intron Gk + chr3L_4_1740001 chr3L_1740001 RAL-705 814 chr3L 1754695 1754721 chr3L 1754814 1754839 10 118 2.0 2.0 2.0 3.3 144 chr3L 1754695 intron Cht2 - chr3L 1754767 intron Cht2 - chr3L 1754839 intron Cht2 - chr3L_10_1750001 chr3L_1750001 RAL-705 815 chr3L 1805700 1805710 chr3L 1805874 1805884 4 174 3.5 1.0 2.2 1.2 184 chr3L 1805700 exon CG42676 + chr3L 1805792 intron CG42676 + chr3L 1805884 intron CG42676 + chr3L_4_1805001 chr3L_1805001 RAL-705 816 chr3L 1922453 1922465 chr3L 1922531 1922543 6 77 4.0 5.5 4.8 1.0 90 chr3L 1922453 intron Dbx + chr3L 1922498 intron Dbx + chr3L 1922543 intron Dbx + chr3L_6_1920001 chr3L_1920001 RAL-705 817 chr3L 1924963 1924977 chr3L 1925101 1925115 5 138 1.5 2.0 1.8 1.8 152 chr3L 1924963 exon Dbx + chr3L 1925039 intron Dbx + chr3L 1925115 intron Dbx + chr3L_5_1925001 chr3L_1925001 RAL-705 818 chr3L 2108251 2108279 chr3L 2113455 2113483 copia 5 5204 2.5 1.0 1.8 1.8 5232 chr3L 2108251 intron sls - chr3L 2110867 intron sls - chr3L 2113483 intron sls - chr3L_5_2110001 chr3L_2110001 RAL-705 819 chr3L 2139207 2139228 chr3L 2139288 2139309 11 81 0.5 3.0 1.8 3.9 102 chr3L 2139207 intron zormin - chr3L 2139258 intron zormin - chr3L 2139309 intron zormin - chr3L_11_2135001 chr3L_2135001 RAL-705 820 chr3L 2168775 2168793 chr3L 2168866 2168884 7 91 2.0 2.0 2.0 2.3 109 chr3L 2168775 exon CG15879 - chr3L 2168830 intron CG15879 - chr3L 2168884 intron CG15879 - chr3L_7_2165001 chr3L_2165001 RAL-705 821 chr3L 2308005 2308031 chr3L 2308111 2308137 6 106 2.5 3.0 2.8 1.6 132 chr3L 2308005 intergenic not near genes chr3L 2308071 intergenic not near genes chr3L 2308137 intergenic not near genes chr3L_6_2305001 chr3L_2305001 RAL-705 822 chr3L 2447504 2447538 chr3L 2456660 2456694 roo 9 9156 2.5 3.5 3.0 2.2 9190 chr3L 2447504 intron CG45186 + chr3L 2452099 intron CG45186 + chr3L 2456694 intron CG45186 + chr3L_9_2450001 chr3L_2450001 RAL-705 823 chr3L 2533654 2533680 chr3L 2533733 2533760 6 81 5.0 2.0 3.5 1.3 106 chr3L 2533654 intron Spn - chr3L 2533707 intron Spn - chr3L 2533760 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-705 824 chr3L 2554056 2554081 chr3L 2554134 2554159 8 78 3.0 0.0 1.5 3.2 103 chr3L 2554056 intron Spn - chr3L 2554108 5` UTR Spn - chr3L 2554159 5` UTR Spn - chr3L_8_2550001 chr3L_2550001 RAL-705 825 chr3L 2561528 2561560 chr3L 2561605 2561637 8 77 2.0 0.5 1.2 3.6 109 chr3L 2561528 intron msn - chr3L 2561582 intron msn - chr3L 2561637 intron msn - chr3L_8_2560001 chr3L_2560001 RAL-705 826 chr3L 2581897 2581911 chr3L 2581991 2582005 4 94 0.5 1.0 0.8 2.2 108 chr3L 2581897 intron msn - chr3L 2581951 intron msn - chr3L 2582005 intron msn - chr3L_4_2580001 chr3L_2580001 RAL-705 827 chr3L 2626090 2626100 chr3L 2626191 2626197 5 100 5.5 5.0 5.2 0.8 107 chr3L 2626090 intron Pxn - chr3L 2626144 intron Pxn - chr3L 2626197 intron Pxn - chr3L_5_2625001 chr3L_2625001 RAL-705 828 chr3L 2683007 2683021 chr3L 2683085 2683099 4 78 1.0 1.0 1.0 2.0 92 chr3L 2683007 intron Fife - chr3L 2683053 intron Fife - chr3L 2683099 intron Fife - chr3L_4_2680001 chr3L_2680001 RAL-705 829 chr3L 2683944 2683972 chr3L 2684020 2684048 5 76 4.0 2.0 3.0 1.2 104 chr3L 2683944 intron Fife - chr3L 2683996 intron Fife - chr3L 2684048 intron Fife - chr3L_5_2680001 chr3L_2680001 RAL-705 830 chr3L 2685746 2685769 chr3L 2685866 2685889 7 119 1.5 4.0 2.8 1.8 143 chr3L 2685746 intron Fife - chr3L 2685818 intron Fife - chr3L 2685889 intron Fife - chr3L_7_2685001 chr3L_2685001 RAL-705 831 chr3L 2719537 2719559 chr3L 2719637 2719661 6 102 2.5 2.5 2.5 1.7 124 chr3L 2719537 3` UTR Mrtf - chr3L 2719599 3` UTR Mrtf - chr3L 2719661 3` UTR Mrtf - chr3L_6_2715001 chr3L_2715001 RAL-705 832 chr3L 2747394 2747396 chr3L 22908066 22908067 5 20160672 8.0 13.0 10.5 0.4 20160673 chr3L 2747394 intron Mrtf - chr3L 12827730 intron CG10960 - chr3L 22908067 intergenic not near genes chr3L_5_12825001 chr3L_12825001 RAL-705 833 chr3L 2751447 2751465 chr3L 2755742 2755760 F-element 4 4295 2.0 4.0 3.0 1.0 4313 chr3L 2751447 intron Mrtf - chr3L 2753604 intron Mrtf - chr3L 2755760 intron Mrtf - chr3L_4_2750001 chr3L_2750001 RAL-705 834 chr3L 2762888 2762913 chr3L 2763018 2763043 4 130 16.0 14.0 15.0 0.2 155 chr3L 2762888 intron Mrtf - chr3L 2762966 intron Mrtf - chr3L 2763043 intron Mrtf - chr3L_4_2760001 chr3L_2760001 RAL-705 835 chr3L 2766749 2766766 chr3L 2766844 2766863 5 96 1.5 4.0 2.8 1.3 114 chr3L 2766749 intergenic Non2 +,Mrtf - chr3L 2766806 intergenic Non2 +,Mrtf - chr3L 2766863 intergenic Non2 +,Mrtf - chr3L_5_2765001 chr3L_2765001 RAL-705 836 chr3L 3057256 3057278 chr3L 3057400 3057422 8 144 2.5 6.0 4.2 1.5 166 chr3L 3057256 exon CG32486 - chr3L 3057339 intron CG32486 - chr3L 3057422 intron CG32486 - chr3L_8_3055001 chr3L_3055001 RAL-705 837 chr3L 3178727 3178742 chr3L 3178810 3178825 9 83 5.0 0.0 2.5 2.6 98 chr3L 3178727 intergenic CG14964 -,Girdin + chr3L 3178776 intergenic Girdin +,CG14964 - chr3L 3178825 intergenic Girdin +,CG14964 - chr3L_9_3175001 chr3L_3175001 RAL-705 838 chr3L 3281457 3281471 chr3L 3281953 3281967 Doc 8 496 3.5 8.0 5.8 1.2 510 chr3L 3281457 intron CG12017 + chr3L 3281712 intron CG12017 + chr3L 3281967 intron CG12017 + chr3L_8_3280001 chr3L_3280001 RAL-705 839 chr3L 3317531 3317553 chr3L 3317610 3317631 9 78 2.0 2.5 2.2 2.8 100 chr3L 3317531 intergenic Drsl5 +,PIG-C - chr3L 3317581 intergenic Drsl5 +,PIG-C - chr3L 3317631 intergenic PIG-C -,Drsl5 + chr3L_9_3315001 chr3L_3315001 RAL-705 840 chr3L 3436295 3436315 chr3L 3436374 3436394 5 79 1.0 1.0 1.0 2.5 99 chr3L 3436295 intron eIF5B - chr3L 3436344 intron eIF5B - chr3L 3436394 intron eIF5B - chr3L_5_3435001 chr3L_3435001 RAL-705 841 chr3L 3475075 3475113 chr3L 3475519 3475555 jockey 9 444 2.0 4.0 3.0 2.2 480 chr3L 3475075 intron CG42324 + chr3L 3475315 intron CG42324 + chr3L 3475555 intron CG42324 + chr3L_9_3475001 chr3L_3475001 RAL-705 842 chr3L 3494196 3494209 chr3L 3494273 3494286 6 77 2.5 2.0 2.2 1.9 90 chr3L 3494196 intron CG42324 + chr3L 3494241 intron CG42324 + chr3L 3494286 intron CG42324 + chr3L_6_3490001 chr3L_3490001 RAL-705 843 chr3L 3601299 3601332 chr3L 3606610 3606643 copia 5 5311 2.5 1.0 1.8 1.8 5344 chr3L 3601299 intron Eip63E + chr3L 3603971 intron Eip63E + chr3L 3606643 intron Eip63E + chr3L_5_3600001 chr3L_3600001 RAL-705 844 chr3L 3627241 3627258 chr3L 3627346 3627363 5 105 2.0 4.5 3.2 1.2 122 chr3L 3627241 intron dar1 + chr3L 3627302 intron dar1 + chr3L 3627363 intron dar1 + chr3L_5_3625001 chr3L_3625001 RAL-705 845 chr3L 3763756 3763779 chr3L 3763837 3763859 4 80 3.5 1.5 2.5 1.1 103 chr3L 3763756 intron CG32264 - chr3L 3763808 intron CG32264 - chr3L 3763859 intron CG32264 - chr3L_4_3760001 chr3L_3760001 RAL-705 846 chr3L 3777066 3777068 chr3L 22908066 22908067 8 19131000 5.0 13.0 9.0 0.8 19131001 chr3L 3777066 intron CG32264 - chr3L 13342566 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_8_13340001 chr3L_13340001 RAL-705 847 chr3L 3793036 3793057 chr3L 3793176 3793196 7 140 2.5 0.5 1.5 2.8 160 chr3L 3793036 intron CG32264 - chr3L 3793116 intron CG32264 - chr3L 3793196 intron CG32264 - chr3L_7_3790001 chr3L_3790001 RAL-705 848 chr3L 3795595 3795624 chr3L 3795672 3795701 4 77 0.0 2.0 1.0 2.0 106 chr3L 3795595 intron CG32264 - chr3L 3795648 intron CG32264 - chr3L 3795701 intron CG32264 - chr3L_4_3795001 chr3L_3795001 RAL-705 849 chr3L 3797239 3797266 chr3L 3797322 3797349 4 83 1.5 3.0 2.2 1.2 110 chr3L 3797239 intron CG32264 - chr3L 3797294 intron CG32264 - chr3L 3797349 intron CG32264 - chr3L_4_3795001 chr3L_3795001 RAL-705 850 chr3L 3815052 3815082 chr3L 3815132 3815162 11 81 2.5 2.5 2.5 3.1 110 chr3L 3815052 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815107 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815162 intron,intron Scsalpha +,CR43932 - chr3L_11_3815001 chr3L_3815001 RAL-705 851 chr3L 3890964 3890990 chr3L 3891042 3891071 10 81 1.5 0.0 0.8 5.6 107 chr3L 3890964 intergenic not near genes chr3L 3891018 intergenic not near genes chr3L 3891071 intergenic not near genes chr3L_10_3890001 chr3L_3890001 RAL-705 852 chr3L 3935828 3935840 chr3L 3935906 3935918 5 78 1.5 3.5 2.5 1.4 90 chr3L 3935828 5` UTR Eip63F-2 + chr3L 3935873 5` UTR Eip63F-2 + chr3L 3935918 5` UTR Eip63F-2 + chr3L_5_3935001 chr3L_3935001 RAL-705 853 chr3L 3976873 3976897 chr3L 3976992 3977015 16 119 2.5 2.5 2.5 4.6 142 chr3L 3976873 intergenic not near genes chr3L 3976944 intergenic not near genes chr3L 3977015 intergenic not near genes chr3L_16_3975001 chr3L_3975001 RAL-705 854 chr3L 3981758 3981777 chr3L 3981840 3981860 6 82 1.5 3.0 2.2 1.9 102 chr3L 3981758 intergenic not near genes chr3L 3981809 intergenic not near genes chr3L 3981860 intergenic not near genes chr3L_6_3980001 chr3L_3980001 RAL-705 855 chr3L 4146811 4146841 chr3L 4146893 4146923 7 82 0.0 1.5 0.8 3.9 112 chr3L 4146811 intergenic not near genes chr3L 4146867 intergenic not near genes chr3L 4146923 intergenic not near genes chr3L_7_4145001 chr3L_4145001 RAL-705 856 chr3L 4311793 4311817 chr3L 4311895 4311920 9 103 2.0 1.0 1.5 3.6 127 chr3L 4311793 intergenic not near genes chr3L 4311856 intergenic not near genes chr3L 4311920 intergenic not near genes chr3L_9_4310001 chr3L_4310001 RAL-705 857 chr3L 4328742 4328765 chr3L 4336240 4336263 412 5 7498 1.5 4.0 2.8 1.3 7521 chr3L 4328742 intron Cip4 - chr3L 4332502 intron Cip4 - chr3L 4336263 intron Cip4 - chr3L_5_4330001 chr3L_4330001 RAL-705 858 chr3L 4364205 4364225 chr3L 4364294 4364314 4 89 0.0 1.0 0.5 2.7 109 chr3L 4364205 intergenic Cip4 -,mRpS6 + chr3L 4364260 intergenic Cip4 -,mRpS6 + chr3L 4364314 intergenic Cip4 -,mRpS6 + chr3L_4_4360001 chr3L_4360001 RAL-705 859 chr3L 4472029 4472044 chr3L 4472149 4472163 7 121 3.5 0.0 1.8 2.5 134 chr3L 4472029 exon CG32248 + chr3L 4472096 exon CG32248 + chr3L 4472163 exon CG32248 + chr3L_7_4470001 chr3L_4470001 RAL-705 860 chr3L 4607278 4607292 chr3L 4607368 4607383 4 90 1.0 4.5 2.8 1.1 105 chr3L 4607278 intron Src64B - chr3L 4607330 intron Src64B - chr3L 4607383 intron Src64B - chr3L_4_4605001 chr3L_4605001 RAL-705 861 chr3L 4748703 4748732 chr3L 4748792 4748823 12 91 1.5 1.0 1.2 5.5 120 chr3L 4748703 intron RhoGEF64C + chr3L 4748763 intron RhoGEF64C + chr3L 4748823 intron RhoGEF64C + chr3L_12_4745001 chr3L_4745001 RAL-705 862 chr3L 4901139 4901156 chr3L 4907329 4907346 diver 7 6190 1.5 0.0 0.8 3.9 6207 chr3L 4901139 intergenic CG13704 + chr3L 4904242 intergenic not near genes chr3L 4907346 intergenic not near genes chr3L_7_4900001 chr3L_4900001 RAL-705 863 chr3L 4930689 4930713 chr3L 4930785 4930809 9 95 0.5 2.0 1.2 4.1 120 chr3L 4930689 intron CR43627 - chr3L 4930749 intron CR43627 - chr3L 4930809 intron CR43627 - chr3L_9_4930001 chr3L_4930001 RAL-705 864 chr3L 5034159 5034185 chr3L 5043308 5043336 roo 4 9151 2.5 1.5 2.0 1.3 9177 chr3L 5034159 intron Con - chr3L 5038748 intron Con - chr3L 5043336 intron Con - chr3L_4_5035001 chr3L_5035001 RAL-705 865 chr3L 5066301 5066324 chr3L 5066400 5066423 5 99 0.5 2.5 1.5 2.0 122 chr3L 5066301 intron Con - chr3L 5066362 intron Con - chr3L 5066423 intron Con - chr3L_5_5065001 chr3L_5065001 RAL-705 866 chr3L 5104484 5104505 chr3L 5124617 5124639 8 20134 0.5 2.0 1.2 3.6 20155 chr3L 5104484 intergenic not near genes chr3L 5114562 intergenic not near genes chr3L 5124639 intergenic not near genes chr3L_8_5110001 chr3L_5110001 RAL-705 867 chr3L 5294617 5294629 chr3L 5295155 5295166 4 538 0.0 1.5 0.8 2.2 549 chr3L 5294617 intergenic not near genes chr3L 5294892 intergenic not near genes chr3L 5295166 intergenic not near genes chr3L_4_5290001 chr3L_5290001 RAL-705 868 chr3L 5294125 5294156 chr3L 5298158 5298188 6 4032 39.0 19.5 29.2 0.2 4063 chr3L 5294125 intergenic not near genes chr3L 5296156 intergenic not near genes chr3L 5298188 intergenic not near genes chr3L_6_5295001 chr3L_5295001 RAL-705 869 chr3L 5321086 5321095 chr3L 5321162 5321171 4 76 3.5 2.5 3.0 1.0 85 chr3L 5321086 intergenic not near genes chr3L 5321128 intergenic not near genes chr3L 5321171 intergenic not near genes chr3L_4_5320001 chr3L_5320001 RAL-705 870 chr3L 5354107 5354130 chr3L 5354201 5354224 8 94 0.0 0.0 0.0 8.0 117 chr3L 5354107 intron lama - chr3L 5354166 intron lama - chr3L 5354224 intron lama - chr3L_8_5350001 chr3L_5350001 RAL-705 871 chr3L 5376270 5376300 chr3L 5376349 5376379 10 79 5.5 3.0 4.2 1.9 109 chr3L 5376270 intergenic not near genes chr3L 5376324 intergenic not near genes chr3L 5376379 intergenic not near genes chr3L_10_5375001 chr3L_5375001 RAL-705 872 chr3L 5493801 5493828 chr3L 5493881 5493909 8 81 1.0 2.5 1.8 2.9 108 chr3L 5493801 3` UTR CR44520 - chr3L 5493855 3` UTR CR44520 - chr3L 5493909 3` UTR CR44520 - chr3L_8_5490001 chr3L_5490001 RAL-705 873 chr3L 5527610 5527628 chr3L 5527762 5527780 9 153 19.0 22.0 20.5 0.4 170 chr3L 5527610 intron Lkr - chr3L 5527695 intron Lkr - chr3L 5527780 intron Lkr - chr3L_9_5525001 chr3L_5525001 RAL-705 874 chr3L 5855570 5855570 chr3L 22908067 22908067 7 17052497 2.5 13.0 7.8 0.8 17052497 chr3L 5855570 intergenic not near genes chr3L 14381818 intergenic CG43120 + chr3L 22908067 intergenic not near genes chr3L_7_14380001 chr3L_14380001 RAL-705 875 chr3L 5855571 5855571 chr3L 22908066 22908067 6 17052495 2.5 13.0 7.8 0.7 17052496 chr3L 5855571 intergenic not near genes chr3L 14381819 intergenic CG43120 + chr3L 22908067 intergenic not near genes chr3L_6_14380001 chr3L_14380001 RAL-705 876 chr3L 5910033 5910064 chr3L 5910274 5910305 pogo 9 241 2.0 3.5 2.8 2.4 272 chr3L 5910033 intron CG13288 + chr3L 5910169 intron CG13288 + chr3L 5910305 intron CG13288 + chr3L_9_5910001 chr3L_5910001 RAL-705 877 chr3L 5926314 5926347 chr3L 5926504 5926537 BS 7 188 3.5 5.0 4.2 1.3 223 chr3L 5926314 intron Vap-33B + chr3L 5926426 intron Vap-33B + chr3L 5926537 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 RAL-705 878 chr3L 6001680 6001717 chr3L 6004380 6004417 jockey 7 2700 3.5 1.5 2.5 2.0 2737 chr3L 6001680 intron PVRAP + chr3L 6003048 intron PVRAP + chr3L 6004417 intron PVRAP + chr3L_7_6000001 chr3L_6000001 RAL-705 879 chr3L 6040371 6040388 chr3L 6042727 6042744 Doc 5 2356 1.5 4.5 3.0 1.2 2373 chr3L 6040371 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042744 intergenic not near genes chr3L_5_6040001 chr3L_6040001 RAL-705 880 chr3L 6052136 6052151 chr3L 6052222 6052237 5 86 0.0 1.0 0.5 3.3 101 chr3L 6052136 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052186 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052237 intergenic Jon65Aii + chr3L_5_6050001 chr3L_6050001 RAL-705 881 chr3L 6052650 6052669 chr3L 6052733 6052751 9 84 3.0 4.5 3.8 1.9 101 chr3L 6052650 exon Jon65Aii + chr3L 6052700 intron Jon65Aii + chr3L 6052751 exon Jon65Aii + chr3L_9_6050001 chr3L_6050001 RAL-705 882 chr3L 6116700 6116721 chr3L 6116784 6116805 7 84 3.5 3.0 3.2 1.7 105 chr3L 6116700 intron Ets65A + chr3L 6116752 intron Ets65A + chr3L 6116805 intron Ets65A + chr3L_7_6115001 chr3L_6115001 RAL-705 883 chr3L 6142412 6142440 chr3L 6142557 6142585 6 145 2.5 2.5 2.5 1.7 173 chr3L 6142412 5` UTR Cpr65Aw - chr3L 6142498 intergenic Cpr65Aw - chr3L 6142585 intergenic Cpr65Aw - chr3L_6_6140001 chr3L_6140001 RAL-705 884 chr3L 6220914 6220948 chr3L 6230066 6230100 roo 11 9152 2.0 3.5 2.8 2.9 9186 chr3L 6220914 5` UTR pncr008:3L + chr3L 6225507 intergenic not near genes chr3L 6230100 intergenic not near genes chr3L_11_6225001 chr3L_6225001 RAL-705 885 chr3L 6315014 6315034 chr3L 6315110 6315130 4 96 1.5 0.0 0.8 2.2 116 chr3L 6315014 intergenic not near genes chr3L 6315072 intergenic not near genes chr3L 6315130 intergenic not near genes chr3L_4_6315001 chr3L_6315001 RAL-705 886 chr3L 6335008 6335035 chr3L 6335479 6335505 297 7 471 4.0 3.0 3.5 1.6 497 chr3L 6335008 intron CG13300 - chr3L 6335256 intron CG13300 - chr3L 6335505 intron CG13300 - chr3L_7_6335001 chr3L_6335001 RAL-705 887 chr3L 6401279 6401308 chr3L 6401357 6401387 7 78 1.5 4.0 2.8 1.8 108 chr3L 6401279 intron CG42747 + chr3L 6401333 intron CG42747 + chr3L 6401387 intron CG42747 + chr3L_7_6400001 chr3L_6400001 RAL-705 888 chr3L 6530286 6530303 chr3L 6530366 6530383 7 80 1.5 2.0 1.8 2.5 97 chr3L 6530286 intron sfl + chr3L 6530334 intron sfl + chr3L 6530383 intron sfl + chr3L_7_6530001 chr3L_6530001 RAL-705 889 chr3L 6668969 6668998 chr3L 6669050 6669079 15 81 1.5 0.0 0.8 8.3 110 chr3L 6668969 intergenic not near genes chr3L 6669024 intergenic not near genes chr3L 6669079 intergenic not near genes chr3L_15_6665001 chr3L_6665001 RAL-705 890 chr3L 6723710 6723734 chr3L 6723807 6723831 5 97 1.0 1.5 1.2 2.3 121 chr3L 6723710 intergenic not near genes chr3L 6723770 intergenic not near genes chr3L 6723831 intergenic not near genes chr3L_5_6720001 chr3L_6720001 RAL-705 891 chr3L 6781125 6781137 chr3L 6783138 6783150 Doc 5 2013 3.5 0.0 1.8 1.8 2025 chr3L 6781125 intergenic not near genes chr3L 6782138 intergenic not near genes chr3L 6783150 intergenic not near genes chr3L_5_6780001 chr3L_6780001 RAL-705 892 chr3L 6887517 6887542 chr3L 6895009 6895034 roo 5 7492 2.0 1.5 1.8 1.8 7517 chr3L 6887517 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895034 intergenic not near genes chr3L_5_6890001 chr3L_6890001 RAL-705 893 chr3L 7033070 7033086 chr3L 7033168 7033184 4 98 1.0 3.5 2.2 1.2 114 chr3L 7033070 intron Mp + chr3L 7033127 intron Mp + chr3L 7033184 intron Mp + chr3L_4_7030001 chr3L_7030001 RAL-705 894 chr3L 7063162 7063179 chr3L 7063494 7063511 7 332 1.5 4.5 3.0 1.8 349 chr3L 7063162 intron CG8641 - chr3L 7063336 intron CG8641 - chr3L 7063511 intron CG8641 - chr3L_7_7060001 chr3L_7060001 RAL-705 895 chr3L 7112597 7112612 chr3L 7112684 7112699 4 87 1.0 2.5 1.8 1.4 102 chr3L 7112597 intron form3 + chr3L 7112648 intron form3 + chr3L 7112699 intron form3 + chr3L_4_7110001 chr3L_7110001 RAL-705 896 chr3L 7129419 7129446 chr3L 7129662 7129689 7 243 1.0 0.5 0.8 3.9 270 chr3L 7129419 3` UTR CG15829 + chr3L 7129554 3` UTR CG15829 + chr3L 7129689 intergenic CG15829 + chr3L_7_7125001 chr3L_7125001 RAL-705 897 chr3L 7244930 7244960 chr3L 7245021 7245052 8 92 1.0 0.5 0.8 4.4 122 chr3L 7244930 exon mei-P22 + chr3L 7244991 exon mei-P22 + chr3L 7245052 exon mei-P22 + chr3L_8_7240001 chr3L_7240001 RAL-705 898 chr3L 7277108 7277134 chr3L 7277210 7277235 4 102 2.5 3.0 2.8 1.1 127 chr3L 7277108 exon unc-13-4A - chr3L 7277172 intron unc-13-4A - chr3L 7277235 intron unc-13-4A - chr3L_4_7275001 chr3L_7275001 RAL-705 899 chr3L 7285339 7285348 chr3L 7285451 7285460 4 112 3.5 2.0 2.8 1.1 121 chr3L 7285339 intron unc-13-4A - chr3L 7285400 intron unc-13-4A - chr3L 7285460 intron unc-13-4A - chr3L_4_7285001 chr3L_7285001 RAL-705 900 chr3L 7377328 7377347 chr3L 7380431 7380451 297 4 3104 1.5 5.0 3.2 1.0 3123 chr3L 7377328 intron SMSr - chr3L 7378890 intron SMSr - chr3L 7380451 intron SMSr - chr3L_4_7375001 chr3L_7375001 RAL-705 901 chr3L 7462937 7462951 chr3L 7463045 7463058 4 108 0.0 4.0 2.0 1.3 121 chr3L 7462937 intergenic not near genes chr3L 7462998 intergenic not near genes chr3L 7463058 intergenic not near genes chr3L_4_7460001 chr3L_7460001 RAL-705 902 chr3L 7480056 7480073 chr3L 7480145 7480161 4 89 1.0 2.5 1.8 1.4 105 chr3L 7480056 intergenic not near genes chr3L 7480108 intergenic not near genes chr3L 7480161 intergenic not near genes chr3L_4_7480001 chr3L_7480001 RAL-705 903 chr3L 7498761 7498789 chr3L 7503538 7503566 F-element 4 4777 1.0 2.5 1.8 1.4 4805 chr3L 7498761 5` UTR CG8539 - chr3L 7501164 intergenic not near genes chr3L 7503566 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-705 904 chr3L 7581623 7581654 chr3L 7581707 7581738 9 84 3.5 0.5 2.0 3.0 115 chr3L 7581623 intergenic not near genes chr3L 7581680 intergenic not near genes chr3L 7581738 intergenic not near genes chr3L_9_7580001 chr3L_7580001 RAL-705 905 chr3L 7591151 7591181 chr3L 7591242 7591271 5 91 2.0 5.5 3.8 1.0 120 chr3L 7591151 intergenic CG7716 - chr3L 7591211 intergenic CG7716 - chr3L 7591271 intergenic CG7716 - chr3L_5_7590001 chr3L_7590001 RAL-705 906 chr3L 7691835 7691863 chr3L 7691927 7691955 14 92 2.0 0.5 1.2 6.4 120 chr3L 7691835 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691895 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691955 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L_14_7690001 chr3L_7690001 RAL-705 907 chr3L 7749470 7749472 chr3L 11777678 11777678 6 4028207 8.0 8.0 8.0 0.7 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_9760001 chr3L_9760001 RAL-705 908 chr3L 7793710 7793735 chr3L 7800762 7800787 297 9 7052 2.0 1.0 1.5 3.6 7077 chr3L 7793710 intron CG32369 - chr3L 7797248 intron CG32369 - chr3L 7800787 intron CG32369 - chr3L_9_7795001 chr3L_7795001 RAL-705 909 chr3L 7844657 7844674 chr3L 7844740 7844757 5 83 1.0 2.0 1.5 2.0 100 chr3L 7844657 intron Pdp1 - chr3L 7844707 intron Pdp1 - chr3L 7844757 intron Pdp1 - chr3L_5_7840001 chr3L_7840001 RAL-705 910 chr3L 7857348 7857373 chr3L 7857426 7857451 4 78 0.0 1.0 0.5 2.7 103 chr3L 7857348 intron Pdp1 - chr3L 7857400 intron Pdp1 - chr3L 7857451 intron Pdp1 - chr3L_4_7855001 chr3L_7855001 RAL-705 911 chr3L 7869667 7869673 chr3L 7869744 7869749 4 76 7.5 6.5 7.0 0.5 82 chr3L 7869667 exon CG32365 + chr3L 7869708 exon CG32365 + chr3L 7869749 exon CG32365 + chr3L_4_7865001 chr3L_7865001 RAL-705 912 chr3L 7886533 7886538 chr3L 7889050 7889056 Stalker4 6 2518 1.0 8.0 4.5 1.1 2523 chr3L 7886533 intron CG32365 + chr3L 7887794 intron CG32365 + chr3L 7889056 intron CG32365 + chr3L_6_7885001 chr3L_7885001 RAL-705 913 chr3L 7916830 7916862 chr3L 7926001 7926033 roo 9 9171 3.5 2.0 2.8 2.4 9203 chr3L 7916830 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926033 3` UTR syd - chr3L_9_7920001 chr3L_7920001 RAL-705 914 chr3L 7930835 7930856 chr3L 7931063 7931085 6 229 1.0 2.5 1.8 2.1 250 chr3L 7930835 intron syd - chr3L 7930960 intron syd - chr3L 7931085 intron syd - chr3L_6_7930001 chr3L_7930001 RAL-705 915 chr3L 7985376 7985394 chr3L 7987703 7987722 NOF 9 2328 2.5 6.5 4.5 1.6 2346 chr3L 7985376 intron nmo + chr3L 7986549 intron nmo + chr3L 7987722 intron nmo + chr3L_9_7985001 chr3L_7985001 RAL-705 916 chr3L 8055570 8055597 chr3L 8055653 8055681 8 84 2.0 1.0 1.5 3.2 111 chr3L 8055570 intron bip1 - chr3L 8055626 intron bip1 - chr3L 8055681 intron bip1 - chr3L_8_8055001 chr3L_8055001 RAL-705 917 chr3L 8062852 8062960 chr3L 8062930 8063096 9 104 1.0 1.0 1.0 4.5 244 chr3L 8062852 intergenic not near genes chr3L 8062974 intergenic not near genes chr3L 8063096 intergenic not near genes chr3L_9_8060001 chr3L_8060001 RAL-705 918 chr3L 8075377 8075390 chr3L 8075463 8075476 5 86 0.5 2.5 1.5 2.0 99 chr3L 8075377 intron Ect4 + chr3L 8075426 intron Ect4 + chr3L 8075476 intron Ect4 + chr3L_5_8075001 chr3L_8075001 RAL-705 919 chr3L 8157485 8157514 chr3L 8157630 8157659 5 145 3.0 0.5 1.8 1.8 174 chr3L 8157485 intron CG42445 - chr3L 8157572 intron CG42445 - chr3L 8157659 intron CG42445 - chr3L_5_8155001 chr3L_8155001 RAL-705 920 chr3L 8203540 8203564 chr3L 8203617 8203641 5 77 1.0 1.0 1.0 2.5 101 chr3L 8203540 intergenic CG13679 + chr3L 8203590 intergenic CG13679 + chr3L 8203641 intergenic CG13679 + chr3L_5_8200001 chr3L_8200001 RAL-705 921 chr3L 8273056 8273062 chr3L 8273154 8273161 4 99 6.0 6.0 6.0 0.6 105 chr3L 8273056 intron Dscam4 + chr3L 8273108 intron Dscam4 + chr3L 8273161 intron Dscam4 + chr3L_4_8270001 chr3L_8270001 RAL-705 922 chr3L 8295793 8295824 chr3L 8295951 8295982 8 158 2.0 3.0 2.5 2.3 189 chr3L 8295793 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8295982 intergenic not near genes chr3L_8_8295001 chr3L_8295001 RAL-705 923 chr3L 8317592 8317596 chr3L 22908066 22908067 9 14590471 0.5 13.0 6.8 1.2 14590475 chr3L 8317592 intergenic not near genes chr3L 15612830 intergenic CG13449 -,comm3 - chr3L 22908067 intergenic not near genes chr3L_9_15610001 chr3L_15610001 RAL-705 924 chr3L 8498305 8498324 chr3L 8505772 8505791 blood 4 7467 3.5 2.5 3.0 1.0 7486 chr3L 8498305 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505791 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-705 925 chr3L 8540709 8540741 chr3L 8540786 8540818 7 77 1.0 2.0 1.5 2.8 109 chr3L 8540709 intergenic not near genes chr3L 8540764 intergenic not near genes chr3L 8540818 intergenic not near genes chr3L_7_8540001 chr3L_8540001 RAL-705 926 chr3L 8736590 8736623 chr3L 8736792 8736825 15 202 0.5 4.5 2.5 4.3 235 chr3L 8736590 intron Prm - chr3L 8736708 intron Prm - chr3L 8736825 intron Prm - chr3L_15_8735001 chr3L_8735001 RAL-705 927 chr3L 8738234 8738258 chr3L 8738339 8738363 9 105 5.0 0.0 2.5 2.6 129 chr3L 8738234 intron Prm - chr3L 8738298 intron Prm - chr3L 8738363 intron Prm - chr3L_9_8735001 chr3L_8735001 RAL-705 928 chr3L 8779561 8779590 chr3L 8779649 8779678 6 88 1.5 0.5 1.0 3.0 117 chr3L 8779561 intron Fhos + chr3L 8779620 intron Fhos + chr3L 8779678 intron Fhos + chr3L_6_8775001 chr3L_8775001 RAL-705 929 chr3L 8791286 8791300 chr3L 8796706 8796720 I-element 7 5420 4.0 5.0 4.5 1.3 5434 chr3L 8791286 exon Fhos + chr3L 8794003 intron Fhos + chr3L 8796720 intron Fhos + chr3L_7_8790001 chr3L_8790001 RAL-705 930 chr3L 8832410 8832433 chr3L 8832504 8832525 9 93 6.0 7.5 6.8 1.2 115 chr3L 8832410 intron dally + chr3L 8832468 intron dally + chr3L 8832525 intron dally + chr3L_9_8830001 chr3L_8830001 RAL-705 931 chr3L 8839740 8839747 chr3L 8839820 8839826 4 80 1.5 2.0 1.8 1.4 86 chr3L 8839740 intron dally + chr3L 8839783 intron dally + chr3L 8839826 intron dally + chr3L_4_8835001 chr3L_8835001 RAL-705 932 chr3L 8861527 8861552 chr3L 8861616 8861642 4 90 1.0 1.0 1.0 2.0 115 chr3L 8861527 intron dally + chr3L 8861584 intron dally + chr3L 8861642 intron dally + chr3L_4_8860001 chr3L_8860001 RAL-705 933 chr3L 8890173 8890202 chr3L 8890286 8890315 8 113 0.5 2.0 1.2 3.6 142 chr3L 8890173 3` UTR dally + chr3L 8890244 3` UTR dally + chr3L 8890315 3` UTR dally + chr3L_8_8890001 chr3L_8890001 RAL-705 934 chr3L 8959397 8959400 chr3L 8959558 8959561 4 161 3.5 1.0 2.2 1.2 164 chr3L 8959397 intron CG13313 + chr3L 8959479 intron CG13313 + chr3L 8959561 intron CG13313 + chr3L_4_8955001 chr3L_8955001 RAL-705 935 chr3L 9003947 9003976 chr3L 9004032 9004061 10 84 4.0 3.0 3.5 2.2 114 chr3L 9003947 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004061 intergenic not near genes chr3L_10_9000001 chr3L_9000001 RAL-705 936 chr3L 9061130 9061157 chr3L 9061237 9061265 8 108 2.0 2.5 2.2 2.5 135 chr3L 9061130 intron Argk - chr3L 9061198 intron Argk - chr3L 9061265 intron Argk - chr3L_8_9060001 chr3L_9060001 RAL-705 937 chr3L 9076926 9076951 chr3L 9084486 9084511 412 8 7560 4.0 1.5 2.8 2.1 7585 chr3L 9076926 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084511 exon Tequila + chr3L_8_9080001 chr3L_9080001 RAL-705 938 chr3L 9130556 9130577 chr3L 9134317 9134338 412 4 3761 5.0 1.0 3.0 1.0 3782 chr3L 9130556 intergenic bol - chr3L 9132447 intergenic not near genes chr3L 9134338 intergenic Dhpr + chr3L_4_9130001 chr3L_9130001 RAL-705 939 chr3L 9164701 9164731 chr3L 9166168 9166198 hobo 10 1467 2.0 1.0 1.5 4.0 1497 chr3L 9164701 intron Rdl - chr3L 9165450 intron Rdl - chr3L 9166198 intron Rdl - chr3L_10_9165001 chr3L_9165001 RAL-705 940 chr3L 9219243 9219282 chr3L 9219915 9219941 jockey 8 670 1.5 2.5 2.0 2.7 698 chr3L 9219243 intergenic not near genes chr3L 9219592 intergenic not near genes chr3L 9219941 intergenic not near genes chr3L_8_9215001 chr3L_9215001 RAL-705 941 chr3L 9226753 9226753 chr3L 22908066 22908067 6 13681314 12.0 13.0 12.5 0.4 13681314 chr3L 9226753 intergenic not near genes chr3L 16067410 intron Mbs + chr3L 22908067 intergenic not near genes chr3L_6_16065001 chr3L_16065001 RAL-705 942 chr3L 9290050 9290064 chr3L 9290126 9290140 4 76 0.0 0.0 0.0 4.0 90 chr3L 9290050 intergenic not near genes chr3L 9290095 intergenic not near genes chr3L 9290140 intergenic not near genes chr3L_4_9290001 chr3L_9290001 RAL-705 943 chr3L 9344202 9344223 chr3L 9344275 9344301 6 77 0.0 3.0 1.5 2.4 99 chr3L 9344202 intron PGRP-LC + chr3L 9344252 intron PGRP-LC + chr3L 9344301 intron PGRP-LC + chr3L_6_9340001 chr3L_9340001 RAL-705 944 chr3L 9347400 9347416 chr3L 9347477 9347493 5 77 0.0 1.0 0.5 3.3 93 chr3L 9347400 intron PGRP-LC + chr3L 9347446 intron PGRP-LC + chr3L 9347493 intron PGRP-LC + chr3L_5_9345001 chr3L_9345001 RAL-705 945 chr3L 9348474 9348485 chr3L 9348974 9348987 4 501 0.0 0.0 0.0 4.0 513 chr3L 9348474 intergenic PGRP-LC + chr3L 9348730 intergenic PGRP-LC + chr3L 9348987 intergenic not near genes chr3L_4_9345001 chr3L_9345001 RAL-705 946 chr3L 9359587 9359614 chr3L 9359678 9359705 6 91 1.5 2.0 1.8 2.1 118 chr3L 9359587 3` UTR CG32039 + chr3L 9359646 3` UTR CG32039 + chr3L 9359705 3` UTR CG32039 + chr3L_6_9355001 chr3L_9355001 RAL-705 947 chr3L 9501709 9501730 chr3L 9502195 9502216 roo 7 486 2.0 3.0 2.5 2.0 507 chr3L 9501709 intron path - chr3L 9501962 intron path - chr3L 9502216 intron path - chr3L_7_9500001 chr3L_9500001 RAL-705 948 chr3L 9510914 9510958 chr3L 9511007 9511037 5 82 0.0 3.0 1.5 2.0 123 chr3L 9510914 intron RpS9 - chr3L 9510976 intron RpS9 - chr3L 9511037 intron RpS9 - chr3L_5_9510001 chr3L_9510001 RAL-705 949 chr3L 9513447 9513467 chr3L 9513534 9513554 6 86 0.5 3.0 1.8 2.1 107 chr3L 9513447 intergenic CG33702 - chr3L 9513500 intergenic CG33702 - chr3L 9513554 intergenic CG33702 - chr3L_6_9510001 chr3L_9510001 RAL-705 950 chr3L 9526488 9526513 chr3L 9528168 9528193 Doc 6 1680 1.0 1.5 1.2 2.7 1705 chr3L 9526488 intergenic not near genes chr3L 9527340 intergenic not near genes chr3L 9528193 intergenic not near genes chr3L_6_9525001 chr3L_9525001 RAL-705 951 chr3L 9571918 9571928 chr3L 9572266 9572276 jockey 5 348 2.0 1.5 1.8 1.8 358 chr3L 9571918 intron CG42673 + chr3L 9572097 intron CG42673 + chr3L 9572276 intron CG42673 + chr3L_5_9570001 chr3L_9570001 RAL-705 952 chr3L 9575904 9575939 chr3L 9580984 9581017 jockey 5 5079 2.5 1.5 2.0 1.7 5113 chr3L 9575904 intron CG42673 + chr3L 9578460 intron CG42673 + chr3L 9581017 intron CG42673 + chr3L_5_9575001 chr3L_9575001 RAL-705 953 chr3L 9629737 9629767 chr3L 9629813 9629843 12 76 1.5 2.5 2.0 4.0 106 chr3L 9629737 intron CG8336 + chr3L 9629790 intron CG8336 + chr3L 9629843 intron CG8336 + chr3L_12_9625001 chr3L_9625001 RAL-705 954 chr3L 9624823 9624848 chr3L 9631061 9631085 10 6237 23.0 27.0 25.0 0.4 6262 chr3L 9624823 exon CG3335 + chr3L 9627954 exon Or67b - chr3L 9631085 exon CG8336 + chr3L_10_9625001 chr3L_9625001 RAL-705 955 chr3L 9741623 9741653 chr3L 9741715 9741745 6 92 0.0 1.0 0.5 4.0 122 chr3L 9741623 intron,intron CG42268 -,CR44348 + chr3L 9741684 intron,intron CG42268 -,CR44348 + chr3L 9741745 intron,intron CG42268 -,CR44348 + chr3L_6_9740001 chr3L_9740001 RAL-705 956 chr3L 9929675 9929698 chr3L 9938456 9938479 roo 8 8781 2.0 1.5 1.8 2.9 8804 chr3L 9929675 intron CG34356 + chr3L 9934077 intron CG34356 + chr3L 9938479 intron CG34356 + chr3L_8_9930001 chr3L_9930001 RAL-705 957 chr3L 9998276 9998299 chr3L 9998567 9998590 11 291 2.5 3.5 3.0 2.8 314 chr3L 9998276 intron dpr6 + chr3L 9998433 intron dpr6 + chr3L 9998590 intron dpr6 + chr3L_11_9995001 chr3L_9995001 RAL-705 958 chr3L 10011588 10011620 chr3L 10011670 10011701 8 82 3.5 2.5 3.0 2.0 113 chr3L 10011588 intron dpr6 + chr3L 10011644 intron dpr6 + chr3L 10011701 intron dpr6 + chr3L_8_10010001 chr3L_10010001 RAL-705 959 chr3L 10052909 10052923 chr3L 10053011 10053026 6 102 2.0 6.0 4.0 1.2 117 chr3L 10052909 intron dpr6 + chr3L 10052968 intron dpr6 + chr3L 10053026 intron dpr6 + chr3L_6_10050001 chr3L_10050001 RAL-705 960 chr3L 10127743 10127769 chr3L 10127820 10127846 8 77 1.5 0.0 0.8 4.4 103 chr3L 10127743 intron dpr6 + chr3L 10127794 intron dpr6 + chr3L 10127846 intron dpr6 + chr3L_8_10125001 chr3L_10125001 RAL-705 961 chr3L 10148411 10148432 chr3L 10148496 10148518 4 86 2.0 3.0 2.5 1.1 107 chr3L 10148411 3` UTR dpr10 - chr3L 10148464 3` UTR dpr10 - chr3L 10148518 3` UTR dpr10 - chr3L_4_10145001 chr3L_10145001 RAL-705 962 chr3L 10298675 10298699 chr3L 10298762 10298786 6 87 1.5 1.0 1.2 2.7 111 chr3L 10298675 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298786 intergenic not near genes chr3L_6_10295001 chr3L_10295001 RAL-705 963 chr3L 10300053 10300072 chr3L 10300145 10300164 4 92 1.0 1.5 1.2 1.8 111 chr3L 10300053 intergenic not near genes chr3L 10300108 intergenic not near genes chr3L 10300164 intergenic not near genes chr3L_4_10300001 chr3L_10300001 RAL-705 964 chr3L 10308753 10308774 chr3L 10308830 10308851 9 77 2.0 3.5 2.8 2.4 98 chr3L 10308753 intergenic not near genes chr3L 10308802 intergenic not near genes chr3L 10308851 intergenic not near genes chr3L_9_10305001 chr3L_10305001 RAL-705 965 chr3L 10310350 10310380 chr3L 10310447 10310477 13 97 1.0 2.5 1.8 4.6 127 chr3L 10310350 intergenic not near genes chr3L 10310414 intergenic not near genes chr3L 10310477 intergenic not near genes chr3L_13_10310001 chr3L_10310001 RAL-705 966 chr3L 10414940 10414967 chr3L 10417312 10417338 Doc 12 2371 2.0 3.5 2.8 3.2 2398 chr3L 10414940 intergenic CG12362 + chr3L 10416139 intergenic not near genes chr3L 10417338 intergenic not near genes chr3L_12_10415001 chr3L_10415001 RAL-705 967 chr3L 10417569 10417606 chr3L 10417646 10417683 12 77 4.5 4.5 4.5 2.2 114 chr3L 10417569 intergenic not near genes chr3L 10417626 intergenic not near genes chr3L 10417683 intergenic not near genes chr3L_12_10415001 chr3L_10415001 RAL-705 968 chr3L 10459713 10459738 chr3L 10459797 10459822 5 84 3.0 1.5 2.2 1.6 109 chr3L 10459713 3` UTR Gem3 - chr3L 10459768 3` UTR Gem3 - chr3L 10459822 3` UTR Gem3 - chr3L_5_10455001 chr3L_10455001 RAL-705 969 chr3L 10526634 10526649 chr3L 10526715 10526730 5 81 2.0 1.5 1.8 1.8 96 chr3L 10526634 intron A2bp1 + chr3L 10526682 intron A2bp1 + chr3L 10526730 intron A2bp1 + chr3L_5_10525001 chr3L_10525001 RAL-705 970 chr3L 10658076 10658207 chr3L 10658153 10658334 10 102 1.0 1.0 1.0 5.0 258 chr3L 10658076 intron CG32066 - chr3L 10658205 intron CG32066 - chr3L 10658334 intron CG32066 - chr3L_10_10655001 chr3L_10655001 RAL-705 971 chr3L 10868805 10868823 chr3L 10868887 10868905 5 82 0.0 4.5 2.2 1.6 100 chr3L 10868805 intron tna + chr3L 10868855 intron tna + chr3L 10868905 intron tna + chr3L_5_10865001 chr3L_10865001 RAL-705 972 chr3L 10889231 10889255 chr3L 10889311 10889335 8 79 1.5 6.0 3.8 1.7 104 chr3L 10889231 intergenic not near genes chr3L 10889283 intergenic not near genes chr3L 10889335 intergenic not near genes chr3L_8_10885001 chr3L_10885001 RAL-705 973 chr3L 11042121 11042142 chr3L 11042260 11042281 5 139 2.0 0.0 1.0 2.5 160 chr3L 11042121 intron CG43693 - chr3L 11042201 intron CG43693 - chr3L 11042281 intron CG43693 - chr3L_5_11040001 chr3L_11040001 RAL-705 974 chr3L 11085688 11085703 chr3L 11085771 11085786 7 83 1.5 5.5 3.5 1.6 98 chr3L 11085688 exon JIL-1 - chr3L 11085737 intron JIL-1 - chr3L 11085786 intron JIL-1 - chr3L_7_11085001 chr3L_11085001 RAL-705 975 chr3L 11087060 11087090 chr3L 11088849 11088877 S-element 6 1789 1.0 2.0 1.5 2.4 1817 chr3L 11087060 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088877 intron JIL-1 - chr3L_6_11085001 chr3L_11085001 RAL-705 976 chr3L 11105295 11105329 chr3L 11107006 11107040 X-element 10 1710 1.0 3.0 2.0 3.3 1745 chr3L 11105295 intergenic not near genes chr3L 11106168 intergenic not near genes chr3L 11107040 exon CG32073 - chr3L_10_11105001 chr3L_11105001 RAL-705 977 chr3L 11135528 11135800 chr3L 11135758 11135885 7 105 0.5 0.5 0.5 4.7 357 chr3L 11135528 intergenic CG14143 + chr3L 11135706 intergenic CG14143 +,CG32082 + chr3L 11135885 intergenic CG32082 +,CG14143 + chr3L_7_11135001 chr3L_11135001 RAL-705 978 chr3L 11158161 11158404 chr3L 11158341 11158536 9 163 17.0 11.5 14.2 0.6 375 chr3L 11158161 exon CG32082 + chr3L 11158348 exon CG32082 + chr3L 11158536 exon CG32082 + chr3L_9_11155001 chr3L_11155001 RAL-705 979 chr3L 11158514 11158777 chr3L 11158628 11158923 14 119 20.0 24.0 22.0 0.6 409 chr3L 11158514 exon CG32082 + chr3L 11158718 exon CG32082 + chr3L 11158923 exon CG32082 + chr3L_14_11155001 chr3L_11155001 RAL-705 980 chr3L 11264464 11264497 chr3L 11271416 11271449 17.6 8 6952 2.0 2.0 2.0 2.7 6985 chr3L 11264464 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271449 intergenic not near genes chr3L_8_11265001 chr3L_11265001 RAL-705 981 chr3L 11304619 11304640 chr3L 11304714 11304735 6 96 1.0 1.5 1.2 2.7 116 chr3L 11304619 intergenic not near genes chr3L 11304677 intergenic not near genes chr3L 11304735 intergenic not near genes chr3L_6_11300001 chr3L_11300001 RAL-705 982 chr3L 11305796 11305808 chr3L 22908066 22908067 14 11602262 2.0 13.0 7.5 1.6 11602271 chr3L 11305796 intergenic not near genes chr3L 17106932 intron Rbp6 - chr3L 22908067 intergenic not near genes chr3L_14_17105001 chr3L_17105001 RAL-705 983 chr3L 11329694 11329708 chr3L 11332896 11332911 jockey 8 3203 5.0 1.0 3.0 2.0 3217 chr3L 11329694 intergenic not near genes chr3L 11331302 intergenic not near genes chr3L 11332911 intergenic not near genes chr3L_8_11330001 chr3L_11330001 RAL-705 984 chr3L 11383965 11383992 chr3L 11384041 11384071 4 78 2.0 1.0 1.5 1.6 106 chr3L 11383965 3` UTR CR42755 - chr3L 11384018 3` UTR CR42755 - chr3L 11384071 3` UTR CR42755 - chr3L_4_11380001 chr3L_11380001 RAL-705 985 chr3L 11432907 11432936 chr3L 11432986 11433015 4 79 0.5 2.0 1.2 1.8 108 chr3L 11432907 intergenic not near genes chr3L 11432961 intergenic not near genes chr3L 11433015 intergenic not near genes chr3L_4_11430001 chr3L_11430001 RAL-705 986 chr3L 11528231 11528258 chr3L 11528312 11528338 7 81 2.5 3.0 2.8 1.8 107 chr3L 11528231 intron Mob2 - chr3L 11528284 intron Mob2 - chr3L 11528338 intron Mob2 - chr3L_7_11525001 chr3L_11525001 RAL-705 987 chr3L 11529210 11529215 chr3L 11529383 11529388 5 173 16.0 4.0 10.0 0.5 178 chr3L 11529210 intron Mob2 - chr3L 11529299 intron Mob2 - chr3L 11529388 intron Mob2 - chr3L_5_11525001 chr3L_11525001 RAL-705 988 chr3L 11558806 11558830 chr3L 11558931 11558955 14 125 2.5 3.5 3.0 3.5 149 chr3L 11558806 intron Mob2 - chr3L 11558880 intron Mob2 - chr3L 11558955 intron Mob2 - chr3L_14_11555001 chr3L_11555001 RAL-705 989 chr3L 11579557 11579583 chr3L 11579663 11579688 5 106 1.0 2.5 1.8 1.8 131 chr3L 11579557 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579688 intergenic CG43390 - chr3L_5_11575001 chr3L_11575001 RAL-705 990 chr3L 11588743 11588755 chr3L 11588899 11588911 6 155 0.5 6.0 3.2 1.4 168 chr3L 11588743 intergenic not near genes chr3L 11588827 intergenic not near genes chr3L 11588911 intergenic not near genes chr3L_6_11585001 chr3L_11585001 RAL-705 991 chr3L 11678095 11678123 chr3L 11678182 11678210 5 87 2.0 1.5 1.8 1.8 115 chr3L 11678095 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678210 intron CG32085 - chr3L_5_11675001 chr3L_11675001 RAL-705 992 chr3L 11723089 11723114 chr3L 11727878 11727904 Doc 5 4793 1.5 2.0 1.8 1.8 4815 chr3L 11723089 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727904 3` UTR Bmcp + chr3L_5_11725001 chr3L_11725001 RAL-705 993 chr3L 11740130 11740146 chr3L 11740228 11740243 4 98 9.5 4.0 6.8 0.5 113 chr3L 11740130 intron CG6024 - chr3L 11740186 intron CG6024 - chr3L 11740243 intron CG6024 - chr3L_4_11740001 chr3L_11740001 RAL-705 994 chr3L 11744013 11744042 chr3L 11744119 11744149 13 108 1.0 0.0 0.5 8.7 136 chr3L 11744013 exon CG6024 - chr3L 11744081 intron CG6024 - chr3L 11744149 intron CG6024 - chr3L_13_11740001 chr3L_11740001 RAL-705 995 chr3L 11796587 11796595 chr3L 11796666 11796672 6 78 5.0 0.0 2.5 1.7 85 chr3L 11796587 exon Klp68D + chr3L 11796630 intron Klp68D + chr3L 11796672 intron Klp68D + chr3L_6_11795001 chr3L_11795001 RAL-705 996 chr3L 11811455 11811460 chr3L 11811533 11811538 4 78 4.0 2.5 3.2 1.0 83 chr3L 11811455 intron CG42255 - chr3L 11811496 intron CG42255 - chr3L 11811538 intron CG42255 - chr3L_4_11810001 chr3L_11810001 RAL-705 997 chr3L 11846404 11846420 chr3L 11846510 11846528 7 108 0.0 3.0 1.5 2.8 124 chr3L 11846404 intergenic not near genes chr3L 11846466 intergenic not near genes chr3L 11846528 intergenic not near genes chr3L_7_11845001 chr3L_11845001 RAL-705 998 chr3L 11849332 11849357 chr3L 11849431 11849457 7 100 5.0 2.0 3.5 1.6 125 chr3L 11849332 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849457 intergenic not near genes chr3L_7_11845001 chr3L_11845001 RAL-705 999 chr3L 11854863 11854870 chr3L 11854964 11854971 4 101 3.5 1.5 2.5 1.1 108 chr3L 11854863 exon CG44837 - chr3L 11854917 intron CG44837 - chr3L 11854971 intron CG44837 - chr3L_4_11850001 chr3L_11850001 RAL-705 1000 chr3L 11864553 11864584 chr3L 11865847 11865879 pogo 6 1294 4.0 6.5 5.2 1.0 1326 chr3L 11864553 intron CG44837 - chr3L 11865216 intron CG44837 - chr3L 11865879 intron CG44837 - chr3L_6_11865001 chr3L_11865001 RAL-705 1001 chr3L 11868165 11868195 chr3L 11868238 11868271 13 76 3.0 0.0 1.5 5.2 106 chr3L 11868165 intron CG44837 - chr3L 11868218 intron CG44837 - chr3L 11868271 intron CG44837 - chr3L_13_11865001 chr3L_11865001 RAL-705 1002 chr3L 11920789 11920814 chr3L 11920967 11920993 9 179 1.0 2.5 1.8 3.2 204 chr3L 11920789 intron CG44837 - chr3L 11920891 intron CG44837 - chr3L 11920993 intron CG44837 - chr3L_9_11920001 chr3L_11920001 RAL-705 1003 chr3L 12013913 12013937 chr3L 12014004 12014027 12 91 3.0 3.0 3.0 3.0 114 chr3L 12013913 intron rols - chr3L 12013970 intron rols - chr3L 12014027 intron rols - chr3L_12_12010001 chr3L_12010001 RAL-705 1004 chr3L 12046080 12046114 chr3L 12046158 12046191 15 78 2.0 4.0 3.0 3.8 111 chr3L 12046080 intron rols - chr3L 12046136 intron rols - chr3L 12046191 intron rols - chr3L_15_12045001 chr3L_12045001 RAL-705 1005 chr3L 12052712 12052733 chr3L 12052801 12052822 7 89 3.5 2.0 2.8 1.8 110 chr3L 12052712 intron rols - chr3L 12052767 intron rols - chr3L 12052822 intron rols - chr3L_7_12050001 chr3L_12050001 RAL-705 1006 chr3L 12089100 12089108 chr3L 12089180 12089188 4 80 3.5 2.5 3.0 1.0 88 chr3L 12089100 3` UTR CG17154 + chr3L 12089144 3` UTR CG17154 + chr3L 12089188 3` UTR CG17154 + chr3L_4_12085001 chr3L_12085001 RAL-705 1007 chr3L 12170792 12170823 chr3L 12170874 12170905 6 82 3.0 1.5 2.2 1.9 113 chr3L 12170792 intron Rh7 - chr3L 12170848 intron Rh7 - chr3L 12170905 intron Rh7 - chr3L_6_12170001 chr3L_12170001 RAL-705 1008 chr3L 12312484 12312508 chr3L 12312562 12312586 9 78 1.5 3.0 2.2 2.8 102 chr3L 12312484 intergenic not near genes chr3L 12312535 intergenic not near genes chr3L 12312586 intergenic not near genes chr3L_9_12310001 chr3L_12310001 RAL-705 1009 chr3L 12394531 12394533 chr3L 22908066 22908066 4 10513534 14.0 13.0 13.5 0.3 10513535 chr3L 12394531 intron CG32104 - chr3L 17651298 intron,intron Ndfip -,Krn - chr3L 22908066 intergenic not near genes chr3L_4_17650001 chr3L_17650001 RAL-705 1010 chr3L 12435573 12435606 chr3L 12435649 12435682 7 75 4.5 3.0 3.8 1.5 109 chr3L 12435573 intergenic not near genes chr3L 12435628 intergenic not near genes chr3L 12435682 intergenic not near genes chr3L_7_12435001 chr3L_12435001 RAL-705 1011 chr3L 12446276 12446293 chr3L 12446351 12446371 4 77 3.0 3.5 3.2 1.0 95 chr3L 12446276 intergenic not near genes chr3L 12446324 intergenic not near genes chr3L 12446371 intergenic not near genes chr3L_4_12445001 chr3L_12445001 RAL-705 1012 chr3L 12578784 12578788 chr3L 22908066 22908066 4 10329280 12.0 13.0 12.5 0.3 10329282 chr3L 12578784 intergenic not near genes chr3L 17743425 intron Ccn + chr3L 22908066 intergenic not near genes chr3L_4_17740001 chr3L_17740001 RAL-705 1013 chr3L 12647953 12647968 chr3L 12648029 12648044 7 76 2.5 2.0 2.2 2.2 91 chr3L 12647953 5` UTR CR32111 + chr3L 12647998 5` UTR CR32111 + chr3L 12648044 5` UTR CR32111 + chr3L_7_12645001 chr3L_12645001 RAL-705 1014 chr3L 12797319 12797340 chr3L 12797404 12797425 5 85 1.5 0.0 0.8 2.8 106 chr3L 12797319 intron Atg1 - chr3L 12797372 intron Atg1 - chr3L 12797425 intron Atg1 - chr3L_5_12795001 chr3L_12795001 RAL-705 1015 chr3L 12874932 12874961 chr3L 12877224 12877253 jockey 9 2292 1.5 3.5 2.5 2.6 2321 chr3L 12874932 intergenic not near genes chr3L 12876092 intergenic not near genes chr3L 12877253 intergenic not near genes chr3L_9_12875001 chr3L_12875001 RAL-705 1016 chr3L 12894810 12894820 chr3L 12894886 12894898 5 77 3.0 7.0 5.0 0.8 88 chr3L 12894810 intergenic CG14118 + chr3L 12894854 intergenic CG14118 + chr3L 12894898 intergenic CG14118 + chr3L_5_12890001 chr3L_12890001 RAL-705 1017 chr3L 12898890 12898910 chr3L 12898966 12898986 7 75 0.0 2.5 1.2 3.2 96 chr3L 12898890 intergenic not near genes chr3L 12898938 intergenic not near genes chr3L 12898986 intergenic not near genes chr3L_7_12895001 chr3L_12895001 RAL-705 1018 chr3L 12919074 12919097 chr3L 12919191 12919213 8 117 4.0 3.5 3.8 1.7 139 chr3L 12919074 intergenic not near genes chr3L 12919144 intergenic not near genes chr3L 12919213 intergenic not near genes chr3L_8_12915001 chr3L_12915001 RAL-705 1019 chr3L 12919279 12919293 chr3L 12924763 12924775 Rt1c 5 5483 1.5 0.0 0.8 2.8 5496 chr3L 12919279 intergenic not near genes chr3L 12922027 intergenic not near genes chr3L 12924775 intergenic not near genes chr3L_5_12920001 chr3L_12920001 RAL-705 1020 chr3L 12957786 12957819 chr3L 12962268 12962301 copia 8 4482 3.0 3.0 3.0 2.0 4515 chr3L 12957786 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962301 intergenic not near genes chr3L_8_12960001 chr3L_12960001 RAL-705 1021 chr3L 13007702 13007726 chr3L 13007781 13007805 5 79 0.0 0.5 0.2 4.2 103 chr3L 13007702 exon CG11263 + chr3L 13007754 3` UTR CG11263 + chr3L 13007805 3` UTR CG11263 + chr3L_5_13005001 chr3L_13005001 RAL-705 1022 chr3L 13009862 13009862 chr3L 22908066 22908068 9 9898204 8.0 13.0 10.5 0.8 9898206 chr3L 13009862 intron CG11261 - chr3L 17958965 intron Eip75B - chr3L 22908068 intergenic not near genes chr3L_9_17955001 chr3L_17955001 RAL-705 1023 chr3L 13015726 13015745 chr3L 13015808 13015827 7 82 1.0 4.5 2.8 1.8 101 chr3L 13015726 intergenic CG11267 +,MICAL-like - chr3L 13015776 intergenic CG11267 +,MICAL-like - chr3L 13015827 intergenic CG11267 +,MICAL-like - chr3L_7_13015001 chr3L_13015001 RAL-705 1024 chr3L 13067544 13067564 chr3L 13067620 13067640 6 76 2.5 0.5 1.5 2.4 96 chr3L 13067544 intergenic not near genes chr3L 13067592 intergenic not near genes chr3L 13067640 intergenic not near genes chr3L_6_13065001 chr3L_13065001 RAL-705 1025 chr3L 13147382 13147405 chr3L 13147458 13147482 4 76 0.0 2.0 1.0 2.0 100 chr3L 13147382 intergenic not near genes chr3L 13147432 intergenic not near genes chr3L 13147482 intergenic not near genes chr3L_4_13145001 chr3L_13145001 RAL-705 1026 chr3L 13223216 13223239 chr3L 13223293 13223314 8 76 0.0 5.0 2.5 2.3 98 chr3L 13223216 intergenic not near genes chr3L 13223265 intergenic not near genes chr3L 13223314 intergenic not near genes chr3L_8_13220001 chr3L_13220001 RAL-705 1027 chr3L 13267285 13267298 chr3L 13267398 13267411 4 113 4.5 3.0 3.8 0.8 126 chr3L 13267285 intron caps + chr3L 13267348 intron caps + chr3L 13267411 intron caps + chr3L_4_13265001 chr3L_13265001 RAL-705 1028 chr3L 13296521 13296541 chr3L 13296612 13296632 5 91 2.5 0.5 1.5 2.0 111 chr3L 13296521 intergenic Sfp70A4 -,CR45253 + chr3L 13296576 3` UTR Sfp70A4 - chr3L 13296632 3` UTR Sfp70A4 - chr3L_5_13295001 chr3L_13295001 RAL-705 1029 chr3L 13301248 13301265 chr3L 13301330 13301347 5 82 0.0 0.0 0.0 5.0 99 chr3L 13301248 intergenic SP + chr3L 13301298 intergenic SP + chr3L 13301347 intergenic SP + chr3L_5_13300001 chr3L_13300001 RAL-705 1030 chr3L 13377393 13377425 chr3L 13377469 13377500 9 76 1.0 1.0 1.0 4.5 107 chr3L 13377393 intergenic not near genes chr3L 13377446 intergenic not near genes chr3L 13377500 intergenic CG14111 + chr3L_9_13375001 chr3L_13375001 RAL-705 1031 chr3L 13525154 13525190 chr3L 13532950 13532986 roo 15 7796 3.0 4.0 3.5 3.3 7832 chr3L 13525154 intergenic not near genes chr3L 13529070 intergenic not near genes chr3L 13532986 intergenic not near genes chr3L_15_13525001 chr3L_13525001 RAL-705 1032 chr3L 13677529 13677562 chr3L 13677606 13677639 5 77 2.5 3.0 2.8 1.3 110 chr3L 13677529 intron bru-3 - chr3L 13677584 intron bru-3 - chr3L 13677639 intron bru-3 - chr3L_5_13675001 chr3L_13675001 RAL-705 1033 chr3L 13774639 13774664 chr3L 13774725 13774750 5 86 0.5 0.5 0.5 3.3 111 chr3L 13774639 intron bru-3 - chr3L 13774694 intron bru-3 - chr3L 13774750 intron bru-3 - chr3L_5_13770001 chr3L_13770001 RAL-705 1034 chr3L 13804547 13804570 chr3L 13822832 13822855 roo 9 18286 5.0 2.5 3.8 1.9 18308 chr3L 13804547 intergenic not near genes chr3L 13813701 intergenic not near genes chr3L 13822855 intergenic not near genes chr3L_9_13810001 chr3L_13810001 RAL-705 1035 chr3L 13901571 13901597 chr3L 13901648 13901674 5 77 2.0 2.5 2.2 1.6 103 chr3L 13901571 intron dysc - chr3L 13901622 intron dysc - chr3L 13901674 intron dysc - chr3L_5_13900001 chr3L_13900001 RAL-705 1036 chr3L 13957886 13957905 chr3L 13958079 13958098 11 193 3.5 4.0 3.8 2.3 212 chr3L 13957886 intron CG32137 + chr3L 13957992 intron CG32137 + chr3L 13958098 intron CG32137 + chr3L_11_13955001 chr3L_13955001 RAL-705 1037 chr3L 13988478 13988493 chr3L 13988599 13988614 4 121 3.0 1.5 2.2 1.2 136 chr3L 13988478 intron,3` UTR CG17364 -,CG9040 + chr3L 13988546 intron,3` UTR CG17364 -,CG9040 + chr3L 13988614 intron,3` UTR CG17364 -,CG9040 + chr3L_4_13985001 chr3L_13985001 RAL-705 1038 chr3L 14029654 14029681 chr3L 14029746 14029773 5 92 2.0 2.0 2.0 1.7 119 chr3L 14029654 3` UTR endos - chr3L 14029714 3` UTR endos - chr3L 14029773 3` UTR endos - chr3L_5_14025001 chr3L_14025001 RAL-705 1039 chr3L 14117455 14117471 chr3L 14117542 14117558 7 87 1.0 0.0 0.5 4.7 103 chr3L 14117455 intron Sox21b - chr3L 14117506 intron Sox21b - chr3L 14117558 intron Sox21b - chr3L_7_14115001 chr3L_14115001 RAL-705 1040 chr3L 14185159 14185178 chr3L 14185235 14185254 7 76 3.0 2.0 2.5 2.0 95 chr3L 14185159 intergenic not near genes chr3L 14185206 intergenic not near genes chr3L 14185254 intergenic not near genes chr3L_7_14185001 chr3L_14185001 RAL-705 1041 chr3L 14245574 14245587 chr3L 14245667 14245680 1360 4 94 2.5 0.0 1.2 1.8 106 chr3L 14245574 3` UTR CR44561 - chr3L 14245627 3` UTR CR44561 - chr3L 14245680 3` UTR CR44561 - chr3L_4_14245001 chr3L_14245001 RAL-705 1042 chr3L 14282588 14282605 chr3L 14282668 14282685 5 80 3.5 5.0 4.2 1.0 97 chr3L 14282588 intron fz + chr3L 14282636 intron fz + chr3L 14282685 intron fz + chr3L_5_14280001 chr3L_14280001 RAL-705 1043 chr3L 14295980 14296014 chr3L 14296466 14296500 roo 9 486 0.5 1.0 0.8 5.0 520 chr3L 14295980 intron fz + chr3L 14296240 intron fz + chr3L 14296500 intron fz + chr3L_9_14295001 chr3L_14295001 RAL-705 1044 chr3L 14312030 14312051 chr3L 14316844 14316865 X-element 4 4814 1.5 2.5 2.0 1.3 4835 chr3L 14312030 exon fz + chr3L 14314448 intron fz + chr3L 14316865 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-705 1045 chr3L 14411864 14411897 chr3L 14411943 14411976 4 78 1.5 1.0 1.2 1.8 112 chr3L 14411864 intron CG3919 + chr3L 14411920 intron CG3919 + chr3L 14411976 intron CG3919 + chr3L_4_14410001 chr3L_14410001 RAL-705 1046 chr3L 14468449 14468477 chr3L 14473653 14473683 copia 6 5206 2.0 2.0 2.0 2.0 5234 chr3L 14468449 intron bbg - chr3L 14471066 intron bbg - chr3L 14473683 intron bbg - chr3L_6_14470001 chr3L_14470001 RAL-705 1047 chr3L 14486025 14486048 chr3L 14486103 14486127 4 80 2.0 0.5 1.2 1.8 102 chr3L 14486025 intron bbg - chr3L 14486076 intron bbg - chr3L 14486127 intron bbg - chr3L_4_14485001 chr3L_14485001 RAL-705 1048 chr3L 14514693 14514694 chr3L 22908067 22908067 Stalker2 7 8393374 12.0 13.0 12.5 0.5 8393374 chr3L 14514693 intron bbg - chr3L 18711380 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_7_18710001 chr3L_18710001 RAL-705 1049 chr3L 14584158 14584182 chr3L 14584245 14584269 6 87 0.5 1.5 1.0 3.0 111 chr3L 14584158 intron HGTX - chr3L 14584214 intron HGTX - chr3L 14584269 intron HGTX - chr3L_6_14580001 chr3L_14580001 RAL-705 1050 chr3L 14721183 14721192 chr3L 14723026 14723035 Rt1c 6 1843 5.0 3.0 4.0 1.2 1852 chr3L 14721183 intron ome + chr3L 14722109 intron ome + chr3L 14723035 intron ome + chr3L_6_14720001 chr3L_14720001 RAL-705 1051 chr3L 14725610 14725624 chr3L 14728604 14728618 Doc 4 2994 2.0 5.5 3.8 0.8 3008 chr3L 14725610 intron ome + chr3L 14727114 intron ome + chr3L 14728618 intron ome + chr3L_4_14725001 chr3L_14725001 RAL-705 1052 chr3L 14801091 14801092 chr3L 22908066 22908068 6 8106975 3.5 13.0 8.2 0.7 8106977 chr3L 14801091 intergenic CG9425 +,NHP2 - chr3L 18854580 5` UTR CR45387 + chr3L 22908068 intergenic not near genes chr3L_6_18850001 chr3L_18850001 RAL-705 1053 chr3L 14809190 14809215 chr3L 14809271 14809296 4 81 1.5 2.0 1.8 1.4 106 chr3L 14809190 intron CG17839 + chr3L 14809243 intron CG17839 + chr3L 14809296 intron CG17839 + chr3L_4_14805001 chr3L_14805001 RAL-705 1054 chr3L 14863914 14863946 chr3L 14864030 14864062 7 116 1.5 3.5 2.5 2.0 148 chr3L 14863914 intron CG17839 + chr3L 14863988 intron CG17839 + chr3L 14864062 intron CG17839 + chr3L_7_14860001 chr3L_14860001 RAL-705 1055 chr3L 14893617 14893635 chr3L 14893704 14893722 4 87 0.5 4.5 2.5 1.1 105 chr3L 14893617 intergenic CG34245 - chr3L 14893670 intergenic CG34245 - chr3L 14893722 intergenic CG34245 - chr3L_4_14890001 chr3L_14890001 RAL-705 1056 chr3L 14895908 14895930 chr3L 14896004 14896026 4 96 0.0 2.0 1.0 2.0 118 chr3L 14895908 intergenic not near genes chr3L 14895967 intergenic not near genes chr3L 14896026 intergenic not near genes chr3L_4_14895001 chr3L_14895001 RAL-705 1057 chr3L 14911040 14911066 chr3L 14911118 14911144 6 78 1.5 1.0 1.2 2.7 104 chr3L 14911040 intron DCX-EMAP + chr3L 14911092 intron DCX-EMAP + chr3L 14911144 intron DCX-EMAP + chr3L_6_14910001 chr3L_14910001 RAL-705 1058 chr3L 14948414 14948433 chr3L 14948508 14948527 6 94 2.5 2.5 2.5 1.7 113 chr3L 14948414 intergenic not near genes chr3L 14948470 intergenic not near genes chr3L 14948527 intergenic not near genes chr3L_6_14945001 chr3L_14945001 RAL-705 1059 chr3L 14964102 14964134 chr3L 14964189 14964221 7 85 3.5 2.5 3.0 1.8 119 chr3L 14964102 intergenic not near genes chr3L 14964162 intergenic not near genes chr3L 14964221 intergenic not near genes chr3L_7_14960001 chr3L_14960001 RAL-705 1060 chr3L 15063699 15063703 chr3L 22908066 22908066 8 7844364 13.0 13.0 13.0 0.6 7844367 chr3L 15063699 intron Sytbeta - chr3L 18985882 intergenic CG11619 -,CG14075 + chr3L 22908066 intergenic not near genes chr3L_8_18985001 chr3L_18985001 RAL-705 1061 chr3L 15261722 15261725 chr3L 22908066 22908066 16 7646343 4.0 13.0 8.5 1.7 7646344 chr3L 15261722 intergenic not near genes chr3L 19084894 intron Mkp3 - chr3L 22908066 intergenic not near genes chr3L_16_19080001 chr3L_19080001 RAL-705 1062 chr3L 15284565 15284599 chr3L 15284644 15284678 8 79 3.0 3.0 3.0 2.0 113 chr3L 15284565 intergenic not near genes chr3L 15284622 intergenic not near genes chr3L 15284678 intergenic not near genes chr3L_8_15280001 chr3L_15280001 RAL-705 1063 chr3L 15354525 15354554 chr3L 15354629 15354653 10 103 1.5 0.5 1.0 5.0 128 chr3L 15354525 intergenic not near genes chr3L 15354589 intergenic not near genes chr3L 15354653 intergenic not near genes chr3L_10_15350001 chr3L_15350001 RAL-705 1064 chr3L 15361142 15361166 chr3L 15361218 15361242 10 76 3.5 1.5 2.5 2.9 100 chr3L 15361142 intergenic not near genes chr3L 15361192 intergenic not near genes chr3L 15361242 intergenic not near genes chr3L_10_15360001 chr3L_15360001 RAL-705 1065 chr3L 15466039 15466132 chr3L 15466121 15466228 12 86 0.0 0.0 0.0 12.0 189 chr3L 15466039 intergenic not near genes chr3L 15466134 intergenic not near genes chr3L 15466228 intergenic not near genes chr3L_12_15465001 chr3L_15465001 RAL-705 1066 chr3L 15541616 15541648 chr3L 15541707 15541738 5 91 3.0 2.5 2.8 1.3 122 chr3L 15541616 intron CrebA + chr3L 15541677 intron CrebA + chr3L 15541738 intron CrebA + chr3L_5_15540001 chr3L_15540001 RAL-705 1067 chr3L 15546007 15546032 chr3L 15546083 15546108 6 76 2.0 1.5 1.8 2.1 101 chr3L 15546007 intron CrebA + chr3L 15546058 intron CrebA + chr3L 15546108 intron CrebA + chr3L_6_15545001 chr3L_15545001 RAL-705 1068 chr3L 15554921 15554952 chr3L 15556708 15556739 S-element 6 1787 1.0 1.0 1.0 3.0 1818 chr3L 15554921 intron AGO2 + chr3L 15555830 intron AGO2 + chr3L 15556739 intron AGO2 + chr3L_6_15555001 chr3L_15555001 RAL-705 1069 chr3L 15594628 15594645 chr3L 15594704 15594721 4 76 1.0 2.5 1.8 1.4 93 chr3L 15594628 intron RhoGAP71E + chr3L 15594674 intron RhoGAP71E + chr3L 15594721 intron RhoGAP71E + chr3L_4_15590001 chr3L_15590001 RAL-705 1070 chr3L 15695975 15696005 chr3L 15696053 15696082 9 78 1.5 0.5 1.0 4.5 107 chr3L 15695975 intergenic not near genes chr3L 15696028 intergenic not near genes chr3L 15696082 intergenic not near genes chr3L_9_15695001 chr3L_15695001 RAL-705 1071 chr3L 15710583 15710606 chr3L 15710667 15710689 8 84 0.5 1.0 0.8 4.4 106 chr3L 15710583 intergenic not near genes chr3L 15710636 intergenic not near genes chr3L 15710689 intergenic not near genes chr3L_8_15710001 chr3L_15710001 RAL-705 1072 chr3L 15732127 15732137 chr3L 15732208 15732218 4 81 3.0 0.0 1.5 1.6 91 chr3L 15732127 intergenic not near genes chr3L 15732172 intergenic not near genes chr3L 15732218 intergenic not near genes chr3L_4_15730001 chr3L_15730001 RAL-705 1073 chr3L 15733753 15733784 chr3L 15733850 15733878 5 96 0.0 0.5 0.2 4.2 125 chr3L 15733753 intergenic not near genes chr3L 15733816 intergenic not near genes chr3L 15733878 intergenic not near genes chr3L_5_15730001 chr3L_15730001 RAL-705 1074 chr3L 15756880 15756910 chr3L 15756963 15756993 10 83 3.0 0.0 1.5 4.0 113 chr3L 15756880 intergenic not near genes chr3L 15756936 intergenic not near genes chr3L 15756993 intergenic not near genes chr3L_10_15755001 chr3L_15755001 RAL-705 1075 chr3L 15768994 15769009 chr3L 15769106 15769121 4 112 3.0 0.0 1.5 1.6 127 chr3L 15768994 intergenic not near genes chr3L 15769058 intergenic not near genes chr3L 15769121 intergenic not near genes chr3L_4_15765001 chr3L_15765001 RAL-705 1076 chr3L 15775842 15775863 chr3L 15775919 15775939 4 76 0.5 5.0 2.8 1.1 97 chr3L 15775842 intergenic not near genes chr3L 15775890 intergenic not near genes chr3L 15775939 intergenic not near genes chr3L_4_15775001 chr3L_15775001 RAL-705 1077 chr3L 15784575 15784595 chr3L 15784670 15784692 5 97 1.5 1.0 1.2 2.3 117 chr3L 15784575 intergenic not near genes chr3L 15784634 intergenic not near genes chr3L 15784692 intergenic not near genes chr3L_5_15780001 chr3L_15780001 RAL-705 1078 chr3L 15878680 15878706 chr3L 15878761 15878787 6 80 2.0 4.0 3.0 1.5 107 chr3L 15878680 intron pHCl - chr3L 15878734 intron pHCl - chr3L 15878787 intron pHCl - chr3L_6_15875001 chr3L_15875001 RAL-705 1079 chr3L 15899232 15899261 chr3L 15899799 15899827 jockey 9 567 2.0 5.5 3.8 1.9 595 chr3L 15899232 intergenic pHCl - chr3L 15899530 intergenic not near genes chr3L 15899827 intergenic sff - chr3L_9_15895001 chr3L_15895001 RAL-705 1080 chr3L 15916854 15916862 chr3L 15916931 15916939 4 77 4.5 0.5 2.5 1.1 85 chr3L 15916854 intron sff - chr3L 15916896 intron sff - chr3L 15916939 intron sff - chr3L_4_15915001 chr3L_15915001 RAL-705 1081 chr3L 16019811 16019841 chr3L 16020000 16020033 9 191 2.5 2.0 2.2 2.8 222 chr3L 16019811 intergenic not near genes chr3L 16019922 intergenic CR43949 - chr3L 16020033 intergenic CR43949 - chr3L_9_16015001 chr3L_16015001 RAL-705 1082 chr3L 16069296 16069303 chr3L 16069385 16069392 5 89 2.5 2.0 2.2 1.6 96 chr3L 16069296 intron Mbs + chr3L 16069344 intron Mbs + chr3L 16069392 intron Mbs + chr3L_5_16065001 chr3L_16065001 RAL-705 1083 chr3L 16074611 16074628 chr3L 16074804 16074819 5 192 3.5 4.0 3.8 1.0 208 chr3L 16074611 intron Mbs + chr3L 16074715 intron Mbs + chr3L 16074819 intron Mbs + chr3L_5_16070001 chr3L_16070001 RAL-705 1084 chr3L 16184105 16184137 chr3L 16188924 16188954 X-element 13 4819 1.0 1.0 1.0 6.5 4849 chr3L 16184105 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188954 intergenic not near genes chr3L_13_16185001 chr3L_16185001 RAL-705 1085 chr3L 16194340 16194359 chr3L 16194429 16194448 7 89 1.0 2.0 1.5 2.8 108 chr3L 16194340 intergenic not near genes chr3L 16194394 intergenic not near genes chr3L 16194448 intergenic not near genes chr3L_7_16190001 chr3L_16190001 RAL-705 1086 chr3L 16198387 16198410 chr3L 16198472 16198495 8 85 2.0 4.0 3.0 2.0 108 chr3L 16198387 intron CG33687 + chr3L 16198441 exon CG33687 + chr3L 16198495 exon CG33687 + chr3L_8_16195001 chr3L_16195001 RAL-705 1087 chr3L 16212815 16212842 chr3L 16212906 16212933 13 91 3.0 0.0 1.5 5.2 118 chr3L 16212815 intergenic CG13073 - chr3L 16212874 intergenic CG13073 - chr3L 16212933 intergenic CG13073 - chr3L_13_16210001 chr3L_16210001 RAL-705 1088 chr3L 16334194 16334224 chr3L 16334277 16334307 8 83 0.0 3.0 1.5 3.2 113 chr3L 16334194 intergenic CG13056 + chr3L 16334250 intergenic CG13056 + chr3L 16334307 intergenic not near genes chr3L_8_16330001 chr3L_16330001 RAL-705 1089 chr3L 16340263 16340283 chr3L 16340387 16340407 4 124 3.5 0.5 2.0 1.3 144 chr3L 16340263 intron CG4998 + chr3L 16340335 intron CG4998 + chr3L 16340407 intron CG4998 + chr3L_4_16340001 chr3L_16340001 RAL-705 1090 chr3L 16406031 16406042 chr3L 22908066 22908067 4 6502032 12.5 13.0 12.8 0.3 6502036 chr3L 16406031 intron fax - chr3L 19657049 intron tey - chr3L 22908067 intergenic not near genes chr3L_4_19655001 chr3L_19655001 RAL-705 1091 chr3L 16443851 16443870 chr3L 16446191 16446210 Doc 5 2340 3.0 4.5 3.8 1.0 2359 chr3L 16443851 intron,intron CG33158 +,dsx-c73A - chr3L 16445030 intron,intron CG33158 +,dsx-c73A - chr3L 16446210 intron,intron CG33158 +,dsx-c73A - chr3L_5_16445001 chr3L_16445001 RAL-705 1092 chr3L 16493989 16494013 chr3L 16494506 16494530 jockey 7 516 5.0 5.0 5.0 1.2 541 chr3L 16493989 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494260 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494530 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_7_16490001 chr3L_16490001 RAL-705 1093 chr3L 16533571 16533586 chr3L 16533682 16533697 6 111 0.5 2.5 1.5 2.4 126 chr3L 16533571 intron CG43373 - chr3L 16533634 intron CG43373 - chr3L 16533697 intron CG43373 - chr3L_6_16530001 chr3L_16530001 RAL-705 1094 chr3L 16537848 16537880 chr3L 16537935 16537967 14 87 2.5 1.5 2.0 4.7 119 chr3L 16537848 intron CG43373 - chr3L 16537908 intron CG43373 - chr3L 16537967 intron CG43373 - chr3L_14_16535001 chr3L_16535001 RAL-705 1095 chr3L 16540054 16540085 chr3L 16540142 16540172 8 88 1.5 1.0 1.2 3.6 118 chr3L 16540054 intron CG43373 - chr3L 16540113 intron CG43373 - chr3L 16540172 intron CG43373 - chr3L_8_16540001 chr3L_16540001 RAL-705 1096 chr3L 16571541 16571566 chr3L 16571746 16571771 4 205 2.5 3.0 2.8 1.1 230 chr3L 16571541 intron Mipp1 - chr3L 16571656 intron Mipp1 - chr3L 16571771 intron Mipp1 - chr3L_4_16570001 chr3L_16570001 RAL-705 1097 chr3L 16610686 16610714 chr3L 16610771 16610799 10 85 1.5 2.5 2.0 3.3 113 chr3L 16610686 3` UTR Su(P) - chr3L 16610742 exon Su(P) - chr3L 16610799 exon Su(P) - chr3L_10_16610001 chr3L_16610001 RAL-705 1098 chr3L 16616513 16616538 chr3L 16621841 16621866 297 6 5328 3.5 1.0 2.2 1.9 5353 chr3L 16616513 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621866 3` UTR Abl - chr3L_6_16615001 chr3L_16615001 RAL-705 1099 chr3L 16818755 16818772 chr3L 16818831 16818848 5 76 5.5 3.0 4.2 1.0 93 chr3L 16818755 intron,intron nudC +,CG13024 - chr3L 16818802 intron,intron nudC +,CG13024 - chr3L 16818848 intron,intron nudC +,CG13024 - chr3L_5_16815001 chr3L_16815001 RAL-705 1100 chr3L 16866210 16866237 chr3L 16866301 16866328 8 91 0.5 0.5 0.5 5.3 118 chr3L 16866210 intron Lmpt + chr3L 16866269 intron Lmpt + chr3L 16866328 intron Lmpt + chr3L_8_16865001 chr3L_16865001 RAL-705 1101 chr3L 16941403 16941421 chr3L 16941504 16941522 9 101 4.5 0.0 2.2 2.8 119 chr3L 16941403 intron Cpr73D - chr3L 16941462 intron Cpr73D - chr3L 16941522 intron Cpr73D - chr3L_9_16940001 chr3L_16940001 RAL-705 1102 chr3L 16945727 16945761 chr3L 16954880 16954913 roo 14 9152 5.5 0.0 2.8 3.7 9186 chr3L 16945727 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954913 5` UTR Nc73EF + chr3L_14_16950001 chr3L_16950001 RAL-705 1103 chr3L 17026791 17026819 chr3L 17026872 17026900 11 81 2.5 3.5 3.0 2.8 109 chr3L 17026791 exon Fit2 + chr3L 17026846 3` UTR Fit2 + chr3L 17026900 3` UTR Fit2 + chr3L_11_17025001 chr3L_17025001 RAL-705 1104 chr3L 17113883 17113896 chr3L 17113968 17113979 4 84 1.5 4.5 3.0 1.0 96 chr3L 17113883 intron Rbp6 - chr3L 17113931 intron Rbp6 - chr3L 17113979 intron Rbp6 - chr3L_4_17110001 chr3L_17110001 RAL-705 1105 chr3L 17149166 17149185 chr3L 17149247 17149265 5 81 6.5 0.0 3.2 1.2 99 chr3L 17149166 intron Rbp6 - chr3L 17149216 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_5_17145001 chr3L_17145001 RAL-705 1106 chr3L 17399998 17400024 chr3L 17400293 17400319 13 295 3.5 1.5 2.5 3.7 321 chr3L 17399998 intron blot - chr3L 17400158 intron blot - chr3L 17400319 intron blot - chr3L_13_17400001 chr3L_17400001 RAL-705 1107 chr3L 17412648 17412675 chr3L 17412735 17412759 7 86 2.5 2.0 2.2 2.2 111 chr3L 17412648 intron blot - chr3L 17412704 intron blot - chr3L 17412759 intron blot - chr3L_7_17410001 chr3L_17410001 RAL-705 1108 chr3L 17646017 17646046 chr3L 17646182 17646213 6 165 17.0 28.0 22.5 0.3 196 chr3L 17646017 exon CG43085 - chr3L 17646115 exon CG43085 - chr3L 17646213 exon CG43085 - chr3L_6_17645001 chr3L_17645001 RAL-705 1109 chr3L 17789851 17789869 chr3L 17789927 17789945 5 76 1.0 2.0 1.5 2.0 94 chr3L 17789851 intergenic not near genes chr3L 17789898 intergenic not near genes chr3L 17789945 intergenic not near genes chr3L_5_17785001 chr3L_17785001 RAL-705 1110 chr3L 17799817 17799842 chr3L 17801604 17801629 S-element 4 1786 0.5 3.0 1.8 1.4 1812 chr3L 17799817 intron NUCB1 - chr3L 17800723 intron NUCB1 - chr3L 17801629 intron NUCB1 - chr3L_4_17800001 chr3L_17800001 RAL-705 1111 chr3L 17884700 17884710 chr3L 17884800 17884810 4 100 0.0 2.0 1.0 2.0 110 chr3L 17884700 intergenic CG5506 - chr3L 17884755 intergenic CG5506 - chr3L 17884810 intergenic CG5506 - chr3L_4_17880001 chr3L_17880001 RAL-705 1112 chr3L 17896615 17896638 chr3L 17896692 17896714 10 77 3.5 3.5 3.5 2.2 99 chr3L 17896615 intergenic not near genes chr3L 17896664 intergenic not near genes chr3L 17896714 intergenic not near genes chr3L_10_17895001 chr3L_17895001 RAL-705 1113 chr3L 17991569 17991584 chr3L 17991647 17991662 4 78 1.5 2.0 1.8 1.4 93 chr3L 17991569 intron Eip75B - chr3L 17991616 intron Eip75B - chr3L 17991662 intron Eip75B - chr3L_4_17990001 chr3L_17990001 RAL-705 1114 chr3L 18006229 18006255 chr3L 18006353 18006379 6 124 1.5 3.5 2.5 1.7 150 chr3L 18006229 intron Eip75B - chr3L 18006304 intron Eip75B - chr3L 18006379 intron Eip75B - chr3L_6_18005001 chr3L_18005001 RAL-705 1115 chr3L 18013975 18013998 chr3L 18014064 18014084 4 88 0.5 0.0 0.2 3.3 109 chr3L 18013975 intron Eip75B - chr3L 18014030 intron Eip75B - chr3L 18014084 intron Eip75B - chr3L_4_18010001 chr3L_18010001 RAL-705 1116 chr3L 18029958 18029972 chr3L 18030035 18030049 4 77 1.5 0.0 0.8 2.2 91 chr3L 18029958 intron Eip75B - chr3L 18030004 intron Eip75B - chr3L 18030049 intron Eip75B - chr3L_4_18030001 chr3L_18030001 RAL-705 1117 chr3L 18045019 18045046 chr3L 18045095 18045122 8 76 1.0 3.0 2.0 2.7 103 chr3L 18045019 intron Eip75B - chr3L 18045070 intron Eip75B - chr3L 18045122 intron Eip75B - chr3L_8_18045001 chr3L_18045001 RAL-705 1118 chr3L 18047718 18047734 chr3L 18056775 18056791 roo 6 9057 1.0 3.0 2.0 2.0 9073 chr3L 18047718 intron Eip75B - chr3L 18052254 intron Eip75B - chr3L 18056791 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RAL-705 1119 chr3L 18092782 18092801 chr3L 18092896 18092916 8 115 3.0 0.0 1.5 3.2 134 chr3L 18092782 intron CG13698 - chr3L 18092849 intron CG13698 - chr3L 18092916 intron CG13698 - chr3L_8_18090001 chr3L_18090001 RAL-705 1120 chr3L 18119659 18119673 chr3L 18119757 18119771 4 98 0.0 2.5 1.2 1.8 112 chr3L 18119659 intron CG7341 + chr3L 18119715 intron CG7341 + chr3L 18119771 intron CG7341 + chr3L_4_18115001 chr3L_18115001 RAL-705 1121 chr3L 18198930 18198931 chr3L 24821492 24821494 4 6622563 0.0 8.0 4.0 0.8 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-705 1122 chr3L 18221097 18221119 chr3L 18221178 18221200 7 81 0.0 0.0 0.0 7.0 103 chr3L 18221097 intergenic not near genes chr3L 18221148 intergenic not near genes chr3L 18221200 intergenic not near genes chr3L_7_18220001 chr3L_18220001 RAL-705 1123 chr3L 18239875 18239887 chr3L 18239951 18239963 5 76 5.0 3.5 4.2 1.0 88 chr3L 18239875 intergenic not near genes chr3L 18239919 intergenic not near genes chr3L 18239963 intergenic not near genes chr3L_5_18235001 chr3L_18235001 RAL-705 1124 chr3L 18262471 18262487 chr3L 18262554 18262570 4 82 1.0 2.0 1.5 1.6 99 chr3L 18262471 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262570 intergenic not near genes chr3L_4_18260001 chr3L_18260001 RAL-705 1125 chr3L 18383445 18383476 chr3L 18383532 18383563 4 87 2.0 1.0 1.5 1.6 118 chr3L 18383445 intergenic not near genes chr3L 18383504 intergenic not near genes chr3L 18383563 intergenic not near genes chr3L_4_18380001 chr3L_18380001 RAL-705 1126 chr3L 18408732 18408755 chr3L 18408818 18408841 4 86 1.5 2.0 1.8 1.4 109 chr3L 18408732 intergenic not near genes chr3L 18408786 intergenic not near genes chr3L 18408841 intergenic not near genes chr3L_4_18405001 chr3L_18405001 RAL-705 1127 chr3L 18445248 18445282 chr3L 18445326 18445360 7 78 0.5 1.5 1.0 3.5 112 chr3L 18445248 intergenic not near genes chr3L 18445304 intergenic not near genes chr3L 18445360 intergenic not near genes chr3L_7_18445001 chr3L_18445001 RAL-705 1128 chr3L 18456272 18456298 chr3L 18456360 18456386 8 88 2.5 1.0 1.8 2.9 114 chr3L 18456272 intergenic CR44670 - chr3L 18456329 intergenic CR44670 - chr3L 18456386 intergenic CR44670 - chr3L_8_18455001 chr3L_18455001 RAL-705 1129 chr3L 18506129 18506155 chr3L 18509591 18509618 F-element 8 3462 3.5 3.5 3.5 1.8 3489 chr3L 18506129 intergenic not near genes chr3L 18507874 intergenic not near genes chr3L 18509618 intergenic not near genes chr3L_8_18505001 chr3L_18505001 RAL-705 1130 chr3L 18528631 18528661 chr3L 18537792 18537822 roo 4 9161 2.5 2.0 2.2 1.2 9191 chr3L 18528631 intergenic not near genes chr3L 18533226 intergenic not near genes chr3L 18537822 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-705 1131 chr3L 18538632 18538652 chr3L 18539125 18539145 4 493 4.5 2.0 3.2 1.0 513 chr3L 18538632 intergenic not near genes chr3L 18538888 intergenic not near genes chr3L 18539145 intergenic not near genes chr3L_4_18535001 chr3L_18535001 RAL-705 1132 chr3L 18593954 18593979 chr3L 18595934 18595959 Doc 8 1980 0.5 0.0 0.2 6.7 2005 chr3L 18593954 intergenic term - chr3L 18594956 intergenic not near genes chr3L 18595959 intergenic CR45389 + chr3L_8_18590001 chr3L_18590001 RAL-705 1133 chr3L 18606756 18606779 chr3L 18606954 18606977 6 197 3.5 3.0 3.2 1.4 221 chr3L 18606756 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606866 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606977 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_6_18605001 chr3L_18605001 RAL-705 1134 chr3L 18638575 18638604 chr3L 18638669 18638698 4 94 1.0 1.0 1.0 2.0 123 chr3L 18638575 intron MYPT-75D + chr3L 18638636 intron MYPT-75D + chr3L 18638698 intron MYPT-75D + chr3L_4_18635001 chr3L_18635001 RAL-705 1135 chr3L 18721778 18721792 chr3L 18721868 18721882 5 91 3.5 3.0 3.2 1.2 104 chr3L 18721778 intergenic CG12477 - chr3L 18721830 intergenic CG12477 - chr3L 18721882 intergenic CG12477 - chr3L_5_18720001 chr3L_18720001 RAL-705 1136 chr3L 18772420 18772436 chr3L 18781101 18781117 roo 5 8681 3.5 1.5 2.5 1.4 8697 chr3L 18772420 intron ftz-f1 - chr3L 18776768 intron ftz-f1 - chr3L 18781117 intron ftz-f1 - chr3L_5_18775001 chr3L_18775001 RAL-705 1137 chr3L 18820884 18820895 chr3L 18821063 18821074 4 179 2.5 0.0 1.2 1.8 190 chr3L 18820884 intergenic CG14073 -,HipHop + chr3L 18820979 intergenic HipHop +,CG14073 - chr3L 18821074 intergenic HipHop +,CG14073 - chr3L_4_18820001 chr3L_18820001 RAL-705 1138 chr3L 18832617 18832645 chr3L 18832695 18832723 7 78 0.0 4.5 2.2 2.2 106 chr3L 18832617 intron Indy - chr3L 18832670 intron Indy - chr3L 18832723 intron Indy - chr3L_7_18830001 chr3L_18830001 RAL-705 1139 chr3L 18833779 18833805 chr3L 18834943 18834969 1360 5 1162 4.0 2.0 3.0 1.2 1190 chr3L 18833779 intron Indy - chr3L 18834374 intron Indy - chr3L 18834969 intron Indy - chr3L_5_18830001 chr3L_18830001 RAL-705 1140 chr3L 18839736 18839765 chr3L 18839819 18839848 6 83 1.0 2.5 1.8 2.1 112 chr3L 18839736 intron Indy - chr3L 18839792 intron Indy - chr3L 18839848 intron Indy - chr3L_6_18835001 chr3L_18835001 RAL-705 1141 chr3L 18935838 18935850 chr3L 18935927 18935939 5 89 3.5 2.5 3.0 1.2 101 chr3L 18935838 intron CG32204 - chr3L 18935888 intron CG32204 - chr3L 18935939 intron CG32204 - chr3L_5_18935001 chr3L_18935001 RAL-705 1142 chr3L 19008845 19008869 chr3L 19009183 19009207 jockey 10 338 3.5 3.0 3.2 2.4 362 chr3L 19008845 intron nkd - chr3L 19009026 intron nkd - chr3L 19009207 intron nkd - chr3L_10_19005001 chr3L_19005001 RAL-705 1143 chr3L 19009979 19010001 chr3L 19010110 19010134 6 132 2.0 2.0 2.0 2.0 155 chr3L 19009979 intron nkd - chr3L 19010056 intron nkd - chr3L 19010134 intron nkd - chr3L_6_19010001 chr3L_19010001 RAL-705 1144 chr3L 19015182 19015216 chr3L 19015266 19015296 5 82 0.0 1.5 0.8 2.8 114 chr3L 19015182 intron nkd - chr3L 19015239 intron nkd - chr3L 19015296 intron nkd - chr3L_5_19015001 chr3L_19015001 RAL-705 1145 chr3L 19025935 19025963 chr3L 19026019 19026047 5 84 4.0 2.0 3.0 1.2 112 chr3L 19025935 intron nkd - chr3L 19025991 intron nkd - chr3L 19026047 intron nkd - chr3L_5_19025001 chr3L_19025001 RAL-705 1146 chr3L 19115635 19115665 chr3L 19115815 19115845 BS 9 180 2.5 2.0 2.2 2.8 210 chr3L 19115635 intron CG14082 - chr3L 19115740 intron CG14082 - chr3L 19115845 intron CG14082 - chr3L_9_19115001 chr3L_19115001 RAL-705 1147 chr3L 19117052 19117062 chr3L 19124498 19124509 mdg1 8 7446 5.5 3.0 4.2 1.5 7457 chr3L 19117052 intron CG14082 - chr3L 19120780 intron CG14082 - chr3L 19124509 intron CG14082 - chr3L_8_19120001 chr3L_19120001 RAL-705 1148 chr3L 19182392 19182409 chr3L 19182473 19182490 6 81 1.5 2.5 2.0 2.0 98 chr3L 19182392 intron fz2 - chr3L 19182441 intron fz2 - chr3L 19182490 intron fz2 - chr3L_6_19180001 chr3L_19180001 RAL-705 1149 chr3L 19208056 19208082 chr3L 19209430 19209456 Doc 11 1374 4.5 1.5 3.0 2.8 1400 chr3L 19208056 intron fz2 - chr3L 19208756 intron fz2 - chr3L 19209456 intron fz2 - chr3L_11_19205001 chr3L_19205001 RAL-705 1150 chr3L 19243332 19243363 chr3L 19243407 19243439 10 75 2.5 5.0 3.8 2.1 107 chr3L 19243332 intergenic not near genes chr3L 19243386 intergenic not near genes chr3L 19243439 intergenic not near genes chr3L_10_19240001 chr3L_19240001 RAL-705 1151 chr3L 19244653 19244684 chr3L 19244736 19244765 6 83 1.5 1.5 1.5 2.4 112 chr3L 19244653 intergenic not near genes chr3L 19244709 intergenic not near genes chr3L 19244765 intergenic not near genes chr3L_6_19240001 chr3L_19240001 RAL-705 1152 chr3L 19253817 19253842 chr3L 19253894 19253919 5 77 1.0 3.5 2.2 1.6 102 chr3L 19253817 3` UTR mRpL21 - chr3L 19253868 3` UTR mRpL21 - chr3L 19253919 3` UTR mRpL21 - chr3L_5_19250001 chr3L_19250001 RAL-705 1153 chr3L 19302343 19302377 chr3L 19302892 19302926 16 549 1.5 4.0 2.8 4.2 583 chr3L 19302343 intron pip - chr3L 19302634 intron pip - chr3L 19302926 intron pip - chr3L_16_19300001 chr3L_19300001 RAL-705 1154 chr3L 19373929 19373964 chr3L 19374076 19374111 5 147 1.0 2.5 1.8 1.8 182 chr3L 19373929 intron CG32206 - chr3L 19374020 intron CG32206 - chr3L 19374111 intron CG32206 - chr3L_5_19370001 chr3L_19370001 RAL-705 1155 chr3L 19377808 19377830 chr3L 19378494 19378516 5 685 1.0 5.0 3.0 1.2 708 chr3L 19377808 intron CG32206 - chr3L 19378162 intron CG32206 - chr3L 19378516 intron CG32206 - chr3L_5_19375001 chr3L_19375001 RAL-705 1156 chr3L 19404977 19405004 chr3L 19405053 19405081 5 77 5.0 3.5 4.2 1.0 104 chr3L 19404977 intron CG32206 - chr3L 19405029 intron CG32206 - chr3L 19405081 intron CG32206 - chr3L_5_19405001 chr3L_19405001 RAL-705 1157 chr3L 19426752 19426774 chr3L 19426829 19426852 6 78 2.5 4.5 3.5 1.3 100 chr3L 19426752 intergenic not near genes chr3L 19426802 intergenic not near genes chr3L 19426852 intergenic not near genes chr3L_6_19425001 chr3L_19425001 RAL-705 1158 chr3L 19430401 19430433 chr3L 19430478 19430511 8 78 2.5 4.0 3.2 1.9 110 chr3L 19430401 intergenic not near genes chr3L 19430456 intergenic not near genes chr3L 19430511 intergenic not near genes chr3L_8_19430001 chr3L_19430001 RAL-705 1159 chr3L 19527924 19527954 chr3L 19528003 19528033 6 79 2.5 4.0 3.2 1.4 109 chr3L 19527924 intergenic not near genes chr3L 19527978 intergenic not near genes chr3L 19528033 intergenic not near genes chr3L_6_19525001 chr3L_19525001 RAL-705 1160 chr3L 19848509 19848535 chr3L 19857692 19857725 roo 9 9189 1.5 3.5 2.5 2.6 9216 chr3L 19848509 intron Papss + chr3L 19853117 intron Papss + chr3L 19857725 intron Papss + chr3L_9_19850001 chr3L_19850001 RAL-705 1161 chr3L 19928605 19928638 chr3L 19928683 19928716 6 77 0.5 1.5 1.0 3.0 111 chr3L 19928605 intergenic CG8004 -,RhoGDI + chr3L 19928660 intergenic RhoGDI +,CG8004 - chr3L 19928716 intergenic RhoGDI +,CG8004 - chr3L_6_19925001 chr3L_19925001 RAL-705 1162 chr3L 19933537 19933554 chr3L 19934359 19934376 6 822 4.0 1.5 2.8 1.6 839 chr3L 19933537 intergenic CR45678 + chr3L 19933956 5` UTR CR45678 + chr3L 19934376 intergenic CR45678 + chr3L_6_19930001 chr3L_19930001 RAL-705 1163 chr3L 19981214 19981230 chr3L 19981294 19981310 6 80 2.5 3.0 2.8 1.6 96 chr3L 19981214 intergenic CG17732 + chr3L 19981262 intergenic CG17732 + chr3L 19981310 intergenic CG17732 + chr3L_6_19980001 chr3L_19980001 RAL-705 1164 chr3L 20081744 20081766 chr3L 20081827 20081849 7 83 3.5 1.5 2.5 2.0 105 chr3L 20081744 intron sNPF-R - chr3L 20081796 intron sNPF-R - chr3L 20081849 intron sNPF-R - chr3L_7_20080001 chr3L_20080001 RAL-705 1165 chr3L 20086789 20086806 chr3L 20086867 20086883 5 78 3.0 0.0 1.5 2.0 94 chr3L 20086789 intron sNPF-R - chr3L 20086836 intron sNPF-R - chr3L 20086883 intron sNPF-R - chr3L_5_20085001 chr3L_20085001 RAL-705 1166 chr3L 20113478 20113512 chr3L 20113573 20113607 10 95 1.0 1.5 1.2 4.5 129 chr3L 20113478 intergenic not near genes chr3L 20113542 intergenic not near genes chr3L 20113607 intergenic not near genes chr3L_10_20110001 chr3L_20110001 RAL-705 1167 chr3L 20113658 20113681 chr3L 20122915 20122938 roo 5 9257 2.0 2.0 2.0 1.7 9280 chr3L 20113658 intergenic not near genes chr3L 20118298 intergenic not near genes chr3L 20122938 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RAL-705 1168 chr3L 20187465 20187486 chr3L 20187544 20187564 5 79 14.0 17.0 15.5 0.3 99 chr3L 20187465 intron CG42674 - chr3L 20187514 intron CG42674 - chr3L 20187564 intron CG42674 - chr3L_5_20185001 chr3L_20185001 RAL-705 1169 chr3L 20257339 20257359 chr3L 20258459 20258479 pogo 5 1119 1.5 6.0 3.8 1.0 1140 chr3L 20257339 intron rdgC + chr3L 20257909 intron rdgC + chr3L 20258479 intron rdgC + chr3L_5_20255001 chr3L_20255001 RAL-705 1170 chr3L 20315657 20315683 chr3L 20315737 20315763 8 79 1.0 2.0 1.5 3.2 106 chr3L 20315657 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315710 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315763 3` UTR,intron alphaSnap +,CR43875 - chr3L_8_20315001 chr3L_20315001 RAL-705 1171 chr3L 20386940 20386971 chr3L 20387042 20387073 7 102 2.5 2.5 2.5 2.0 133 chr3L 20386940 intron fbl + chr3L 20387006 intron fbl + chr3L 20387073 intron fbl + chr3L_7_20385001 chr3L_20385001 RAL-705 1172 chr3L 20463557 20463587 chr3L 20463642 20463672 5 84 2.5 3.5 3.0 1.2 115 chr3L 20463557 intron atk - chr3L 20463614 intron atk - chr3L 20463672 intron atk - chr3L_5_20460001 chr3L_20460001 RAL-705 1173 chr3L 20476758 20476776 chr3L 20484357 20484374 springer 4 7598 3.5 7.5 5.5 0.6 7616 chr3L 20476758 3` UTR isoQC + chr3L 20480566 intergenic not near genes chr3L 20484374 3` UTR ZnT77C - chr3L_4_20480001 chr3L_20480001 RAL-705 1174 chr3L 20590064 20590090 chr3L 20590603 20590629 412 5 538 1.5 3.0 2.2 1.6 565 chr3L 20590064 intergenic not near genes chr3L 20590346 intergenic not near genes chr3L 20590629 intergenic not near genes chr3L_5_20590001 chr3L_20590001 RAL-705 1175 chr3L 20710765 20710788 chr3L 20710841 20710865 4 77 0.5 1.5 1.0 2.0 100 chr3L 20710765 intergenic not near genes chr3L 20710815 intergenic not near genes chr3L 20710865 intergenic not near genes chr3L_4_20710001 chr3L_20710001 RAL-705 1176 chr3L 20771563 20771567 chr3L 22908066 22908066 4 2136500 11.0 13.0 12.0 0.3 2136503 chr3L 20771563 5` UTR Pitslre + chr3L 21839814 5` UTR P5CDh1 - chr3L 22908066 intergenic not near genes chr3L_4_21835001 chr3L_21835001 RAL-705 1177 chr3L 20821296 20821308 chr3L 20824764 20824777 NOF 4 3468 3.0 2.5 2.8 1.1 3481 chr3L 20821296 intron Pka-R1 + chr3L 20823036 intron Pka-R1 + chr3L 20824777 intron Pka-R1 + chr3L_4_20820001 chr3L_20820001 RAL-705 1178 chr3L 20849278 20849296 chr3L 20849357 20849375 8 79 1.0 2.5 1.8 2.9 97 chr3L 20849278 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849375 intron CG32432 - chr3L_8_20845001 chr3L_20845001 RAL-705 1179 chr3L 20849722 20849748 chr3L 20850071 20850096 5 349 0.5 2.5 1.5 2.0 374 chr3L 20849722 intron CG32432 - chr3L 20849909 intron CG32432 - chr3L 20850096 intron CG32432 - chr3L_5_20845001 chr3L_20845001 RAL-705 1180 chr3L 20913749 20913780 chr3L 20913829 20913862 7 81 0.0 2.5 1.2 3.2 113 chr3L 20913749 intergenic CR43930 - chr3L 20913806 intergenic CR43930 - chr3L 20913862 intergenic CR43930 - chr3L_7_20910001 chr3L_20910001 RAL-705 1181 chr3L 21014919 21014944 chr3L 21023399 21023424 Tirant 7 8480 1.5 4.0 2.8 1.8 8505 chr3L 21014919 intron skd - chr3L 21019172 intron skd - chr3L 21023424 intron skd - chr3L_7_21015001 chr3L_21015001 RAL-705 1182 chr3L 21151863 21151889 chr3L 21156947 21156973 flea 8 5084 3.5 2.0 2.8 2.1 5110 chr3L 21151863 intron Ac78C - chr3L 21154418 intron Ac78C - chr3L 21156973 intron Ac78C - chr3L_8_21150001 chr3L_21150001 RAL-705 1183 chr3L 21160963 21160995 chr3L 21161059 21161091 5 96 3.5 3.5 3.5 1.1 128 chr3L 21160963 5` UTR Ac78C - chr3L 21161027 intron Ac78C - chr3L 21161091 intron Ac78C - chr3L_5_21160001 chr3L_21160001 RAL-705 1184 chr3L 21161429 21161456 chr3L 21161508 21161535 4 79 0.5 1.5 1.0 2.0 106 chr3L 21161429 intron Ac78C - chr3L 21161482 intron Ac78C - chr3L 21161535 intron Ac78C - chr3L_4_21160001 chr3L_21160001 RAL-705 1185 chr3L 21243747 21243768 chr3L 21251310 21251331 412 4 7563 2.5 1.5 2.0 1.3 7584 chr3L 21243747 intron Eip78C + chr3L 21247539 intron Eip78C + chr3L 21251331 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-705 1186 chr3L 21306148 21306178 chr3L 21315307 21315337 roo 5 9159 2.5 2.5 2.5 1.4 9189 chr3L 21306148 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310742 intron Pc - chr3L 21315337 3` UTR Pc - chr3L_5_21310001 chr3L_21310001 RAL-705 1187 chr3L 21498854 21498862 chr3L 21500490 21500498 1360 5 1636 2.0 9.0 5.5 0.8 1644 chr3L 21498854 intron Glg1 - chr3L 21499676 intron Glg1 - chr3L 21500498 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-705 1188 chr3L 21563387 21563417 chr3L 21563737 21563767 10 350 1.0 3.0 2.0 3.3 380 chr3L 21563387 intergenic not near genes chr3L 21563577 intergenic not near genes chr3L 21563767 intergenic not near genes chr3L_10_21560001 chr3L_21560001 RAL-705 1189 chr3L 21639199 21639227 chr3L 21639278 21639306 7 79 1.0 3.5 2.2 2.2 107 chr3L 21639199 intergenic CG32444 +,CG32445 + chr3L 21639252 intergenic CG32445 +,CG32444 + chr3L 21639306 intergenic CG32445 +,CG32444 + chr3L_7_21635001 chr3L_21635001 RAL-705 1190 chr3L 21656995 21657020 chr3L 21657088 21657113 11 93 2.0 2.0 2.0 3.7 118 chr3L 21656995 intron CG43980 + chr3L 21657054 intron CG43980 + chr3L 21657113 intron CG43980 + chr3L_11_21655001 chr3L_21655001 RAL-705 1191 chr3L 21736346 21736365 chr3L 21736547 21736566 4 201 0.0 1.5 0.8 2.2 220 chr3L 21736346 intergenic CR43888 + chr3L 21736456 intergenic CR43888 + chr3L 21736566 intergenic CR43888 + chr3L_4_21735001 chr3L_21735001 RAL-705 1192 chr3L 21769053 21769082 chr3L 21769139 21769169 7 87 1.0 1.5 1.2 3.2 116 chr3L 21769053 intron,intron Syn1 -,CG42689 + chr3L 21769111 intron,intron Syn1 -,CG42689 + chr3L 21769169 intron,intron Syn1 -,CG42689 + chr3L_7_21765001 chr3L_21765001 RAL-705 1193 chr3L 21836727 21836760 chr3L 21836813 21836846 8 86 1.5 3.0 2.2 2.5 119 chr3L 21836727 3` UTR P5CDh1 - chr3L 21836786 3` UTR P5CDh1 - chr3L 21836846 3` UTR P5CDh1 - chr3L_8_21835001 chr3L_21835001 RAL-705 1194 chr3L 21849499 21849529 chr3L 21849581 21849610 11 82 2.0 0.5 1.2 5.0 111 chr3L 21849499 intron mub + chr3L 21849554 intron mub + chr3L 21849610 intron mub + chr3L_11_21845001 chr3L_21845001 RAL-705 1195 chr3L 21874997 21875026 chr3L 21875154 21875183 5 157 2.0 2.0 2.0 1.7 186 chr3L 21874997 intron mub + chr3L 21875090 intron mub + chr3L 21875183 intron mub + chr3L_5_21875001 chr3L_21875001 RAL-705 1196 chr3L 21901024 21901045 chr3L 21901117 21901138 8 93 3.5 5.0 4.2 1.5 114 chr3L 21901024 intron mub + chr3L 21901081 intron mub + chr3L 21901138 intron mub + chr3L_8_21900001 chr3L_21900001 RAL-705 1197 chr3L 21952453 21952483 chr3L 21953196 21953225 transib1 8 743 0.5 1.0 0.8 4.4 772 chr3L 21952453 intergenic not near genes chr3L 21952839 intergenic not near genes chr3L 21953225 intergenic not near genes chr3L_8_21950001 chr3L_21950001 RAL-705 1198 chr3L 22016366 22016401 chr3L 22016482 22016517 9 116 3.5 3.0 3.2 2.1 151 chr3L 22016366 intergenic not near genes chr3L 22016442 intergenic not near genes chr3L 22016517 intergenic not near genes chr3L_9_22015001 chr3L_22015001 RAL-705 1199 chr3L 22033692 22033722 chr3L 22033770 22033800 6 78 2.0 1.5 1.8 2.1 108 chr3L 22033692 intergenic not near genes chr3L 22033746 intergenic not near genes chr3L 22033800 intergenic not near genes chr3L_6_22030001 chr3L_22030001 RAL-705 1200 chr3L 22046183 22046215 chr3L 22046286 22046318 9 103 1.5 1.5 1.5 3.6 135 chr3L 22046183 intron Oct-TyrR + chr3L 22046250 intron Oct-TyrR + chr3L 22046318 intron Oct-TyrR + chr3L_9_22045001 chr3L_22045001 RAL-705 1201 chr3L 22099674 22099704 chr3L 22105860 22105890 3S18 7 6186 4.5 2.5 3.5 1.6 6216 chr3L 22099674 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105890 intergenic not near genes chr3L_7_22100001 chr3L_22100001 RAL-705 1202 chr3L 22124798 22124840 chr3L 22124892 22124923 6 90 0.0 2.5 1.2 2.7 125 chr3L 22124798 intergenic not near genes chr3L 22124860 intergenic not near genes chr3L 22124923 intergenic not near genes chr3L_6_22120001 chr3L_22120001 RAL-705 1203 chr3L 22137523 22137556 chr3L 22137600 22137633 11 77 1.5 2.5 2.0 3.7 110 chr3L 22137523 intron olf413 + chr3L 22137578 intron olf413 + chr3L 22137633 intron olf413 + chr3L_11_22135001 chr3L_22135001 RAL-705 1204 chr3L 22166446 22166467 chr3L 22166524 22166545 7 78 2.5 1.0 1.8 2.5 99 chr3L 22166446 intron olf413 + chr3L 22166496 intron olf413 + chr3L 22166545 intron olf413 + chr3L_7_22165001 chr3L_22165001 RAL-705 1205 chr3L 22169466 22169483 chr3L 22169559 22169576 9 92 2.0 4.0 3.0 2.2 110 chr3L 22169466 intron olf413 + chr3L 22169521 intron olf413 + chr3L 22169576 intron olf413 + chr3L_9_22165001 chr3L_22165001 RAL-705 1206 chr3L 22179093 22179115 chr3L 22179179 22179201 5 85 1.0 4.0 2.5 1.4 108 chr3L 22179093 intron olf413 + chr3L 22179147 intron olf413 + chr3L 22179201 intron olf413 + chr3L_5_22175001 chr3L_22175001 RAL-705 1207 chr3L 22411371 22411398 chr3L 22411448 22411475 6 76 2.5 2.5 2.5 1.7 104 chr3L 22411371 intergenic not near genes chr3L 22411423 intergenic not near genes chr3L 22411475 intergenic not near genes chr3L_6_22410001 chr3L_22410001 RAL-705 1208 chr3L 22435583 22435609 chr3L 22435659 22435682 8 75 2.5 1.0 1.8 2.9 99 chr3L 22435583 intergenic not near genes chr3L 22435632 intergenic not near genes chr3L 22435682 intergenic not near genes chr3L_8_22435001 chr3L_22435001 RAL-705 1209 chr3L 22447194 22447234 chr3L 22447285 22447324 12 91 2.0 2.0 2.0 4.0 130 chr3L 22447194 intergenic not near genes chr3L 22447259 intergenic not near genes chr3L 22447324 intergenic not near genes chr3L_12_22445001 chr3L_22445001 RAL-705 1210 chr3L 22543074 22543108 chr3L 22543151 22543185 8 77 4.0 3.0 3.5 1.8 111 chr3L 22543074 intergenic not near genes chr3L 22543130 intergenic not near genes chr3L 22543185 intergenic not near genes chr3L_8_22540001 chr3L_22540001 RAL-705 1211 chr3L 22555772 22555791 chr3L 22563239 22563261 blood 6 7467 2.5 1.0 1.8 2.1 7489 chr3L 22555772 intergenic not near genes chr3L 22559516 intergenic not near genes chr3L 22563261 intergenic not near genes chr3L_6_22555001 chr3L_22555001 RAL-705 1212 chr3L 22570425 22570455 chr3L 22570568 22570599 13 144 3.0 3.0 3.0 3.2 174 chr3L 22570425 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570599 intergenic not near genes chr3L_13_22570001 chr3L_22570001 RAL-705 1213 chr3L 22577621 22577649 chr3L 22582409 22582431 Doc 13 4787 2.5 5.0 3.8 2.7 4810 chr3L 22577621 intergenic not near genes chr3L 22580026 intergenic not near genes chr3L 22582431 3` UTR CG14459 - chr3L_13_22580001 chr3L_22580001 RAL-705 1214 chr3L 22617188 22617218 chr3L 22624640 22624670 blood 11 7452 3.5 1.5 2.5 3.1 7482 chr3L 22617188 intron CG14459 - chr3L 22620929 intron CG14459 - chr3L 22624670 intron CG14459 - chr3L_11_22620001 chr3L_22620001 RAL-705 1215 chr3L 22630740 22630771 chr3L 22630819 22630850 10 79 3.5 4.0 3.8 2.1 110 chr3L 22630740 intron CG14459 - chr3L 22630795 intron CG14459 - chr3L 22630850 intron CG14459 - chr3L_10_22630001 chr3L_22630001 RAL-705 1216 chr3L 22652320 22652353 chr3L 22652458 22652491 15 138 1.0 2.5 1.8 5.4 171 chr3L 22652320 exon CG33772 - chr3L 22652406 intron CG33772 - chr3L 22652491 exon CG33772 - chr3L_15_22650001 chr3L_22650001 RAL-705 1217 chr3L 22761393 22761418 chr3L 22766827 22766852 Ivk 9 5434 5.0 6.0 5.5 1.4 5459 chr3L 22761393 intron SPoCk + chr3L 22764122 intron SPoCk + chr3L 22766852 intron SPoCk + chr3L_9_22760001 chr3L_22760001 RAL-705 1218 chr3L 22865982 22866011 chr3L 22867115 22867144 Doc 11 1133 2.0 2.0 2.0 3.7 1162 chr3L 22865982 intron CG33170 + chr3L 22866563 intron CG33170 + chr3L 22867144 intron CG33170 + chr3L_11_22865001 chr3L_22865001 RAL-705 1219 chr3L 19220633 19220637 chr3L 22908066 22908066 9 3687432 14.0 13.0 13.5 0.6 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_9_21060001 chr3L_21060001 RAL-705 1220 chr3L 19220634 19220637 chr3L 22908067 22908067 4 3687431 14.0 13.0 13.5 0.3 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-705 1221 chr3L 22909016 22909049 chr3L 22909107 22909140 9 91 3.0 2.0 2.5 2.6 124 chr3L 22909016 intergenic CR45661 + chr3L 22909078 intergenic CR45661 + chr3L 22909140 intergenic CR45661 + chr3L_9_22905001 chr3L_22905001 RAL-705 1222 chr3L 22980575 22980595 chr3L 22980660 22980680 9 85 3.5 3.5 3.5 2.0 105 chr3L 22980575 intergenic not near genes chr3L 22980628 intergenic not near genes chr3L 22980680 intergenic not near genes chr3L_9_22980001 chr3L_22980001 RAL-705 1223 chr3L 22989864 22989889 chr3L 22996838 22996863 297 4 6974 1.5 1.5 1.5 1.6 6999 chr3L 22989864 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996863 intergenic not near genes chr3L_4_22990001 chr3L_22990001 RAL-705 1224 chr3L 22997085 22997098 chr3L 22997170 22997183 4 85 1.0 2.0 1.5 1.6 98 chr3L 22997085 intergenic not near genes chr3L 22997134 intergenic not near genes chr3L 22997183 intergenic not near genes chr3L_4_22995001 chr3L_22995001 RAL-705 1225 chr3L 23042229 23042258 chr3L 23048978 23049008 gypsy6 6 6752 3.5 2.0 2.8 1.6 6779 chr3L 23042229 intergenic not near genes chr3L 23045618 intergenic not near genes chr3L 23049008 intergenic not near genes chr3L_6_23045001 chr3L_23045001 RAL-705 1226 chr3L 23062894 23062900 chr3L 25074004 25074010 Tirant 4 2011110 9.0 16.0 12.5 0.3 2011116 chr3L 23062894 intergenic not near genes chr3L 24068452 intergenic not near genes chr3L 25074010 intergenic not near genes chr3L_4_24065001 chr3L_24065001 RAL-705 1227 chr3L 23182262 23182294 chr3L 23182376 23182408 13 113 2.5 1.0 1.8 4.6 146 chr3L 23182262 intron CG34031 + chr3L 23182335 intron CG34031 + chr3L 23182408 intron CG34031 + chr3L_13_23180001 chr3L_23180001 RAL-705 1228 chr3L 22908066 22908067 chr3L 23657063 23657066 10 748999 13.5 5.5 9.5 1.0 749000 chr3L 22908066 intergenic not near genes chr3L 23282566 intron nAChRalpha4 + chr3L 23657066 intron AGO3 + chr3L_10_23280001 chr3L_23280001 RAL-705 1229 chr3L 23875535 23875547 chr3L 23875614 23875628 4 80 4.5 5.0 4.8 0.7 93 chr3L 23875535 intron CG40470 - chr3L 23875582 intron CG40470 - chr3L 23875628 intron CG40470 - chr3L_4_23875001 chr3L_23875001 RAL-705 1230 chr3L 24012419 24012437 chr3L 24020760 24020778 roo 4 8341 0.5 2.0 1.2 1.8 8359 chr3L 24012419 intergenic not near genes chr3L 24016598 intergenic not near genes chr3L 24020778 intergenic not near genes chr3L_4_24015001 chr3L_24015001 RAL-705 1231 chr3L 24084496 24084509 chr3L 24084576 24084596 4 84 2.0 1.5 1.8 1.4 100 chr3L 24084496 intron Snap25 + chr3L 24084546 intron Snap25 + chr3L 24084596 intron Snap25 + chr3L_4_24080001 chr3L_24080001 RAL-705 1232 chr3L 24168788 24168820 chr3L 24176114 24176148 ZAM 11 7327 3.5 3.5 3.5 2.4 7360 chr3L 24168788 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176148 intron Snap25 + chr3L_11_24170001 chr3L_24170001 RAL-705 1233 chr3L 24206084 24206110 chr3L 24206398 24206423 flea 5 313 1.0 5.0 3.0 1.2 339 chr3L 24206084 intron Snap25 + chr3L 24206254 intron Snap25 + chr3L 24206423 intron Snap25 + chr3L_5_24205001 chr3L_24205001 RAL-705 1234 chr3L 24791899 24791921 chr3L 24796678 24796700 Doc 7 4779 2.0 2.0 2.0 2.3 4801 chr3L 24791899 intergenic not near genes chr3L 24794300 intergenic not near genes chr3L 24796700 intergenic not near genes chr3L_7_24790001 chr3L_24790001 RAL-705 1235 chr3L 18198930 18198931 chr3L 24821492 24821494 4 6622562 0.0 8.0 4.0 0.8 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-705 1236 chr3L 25464021 25464093 chr3L 25464108 25464191 14 92 6.5 4.0 5.2 2.3 170 chr3L 25464021 intergenic not near genes chr3L 25464106 intergenic not near genes chr3L 25464191 intergenic not near genes chr3L_14_25460001 chr3L_25460001 RAL-705 1237 chr3L 25512804 25512809 chr3L 25512880 25512887 4 78 2.0 3.5 2.8 1.1 83 chr3L 25512804 intron CG41343 - chr3L 25512846 intron CG41343 - chr3L 25512887 intron CG41343 - chr3L_4_25510001 chr3L_25510001 RAL-705 1238 chr3L 25513577 25513606 chr3L 25513656 25513683 4 78 2.0 1.0 1.5 1.6 106 chr3L 25513577 intron CG41343 - chr3L 25513630 intron CG41343 - chr3L 25513683 intron CG41343 - chr3L_4_25510001 chr3L_25510001 RAL-705 1239 chr3L 25514873 25514901 chr3L 25514965 25514993 4 92 2.0 2.0 2.0 1.3 120 chr3L 25514873 intron CG41343 - chr3L 25514933 intron CG41343 - chr3L 25514993 intron CG41343 - chr3L_4_25510001 chr3L_25510001 RAL-705 1240 chr3L 25628504 25628528 chr3L 25633275 25633299 F-element 7 4771 1.5 3.5 2.5 2.0 4795 chr3L 25628504 intron CG41343 - chr3L 25630902 intron CG41343 - chr3L 25633299 intron CG41343 - chr3L_7_25630001 chr3L_25630001 RAL-705 1241 chr3L 25709269 25709278 chr3L 25709403 25709413 6 135 2.0 0.0 1.0 3.0 144 chr3L 25709269 intergenic CR45180 + chr3L 25709341 intergenic CR45180 + chr3L 25709413 intergenic CR45180 + chr3L_6_25705001 chr3L_25705001 RAL-705 1242 chr3L 25842486 25842497 chr3L 25842572 25842583 6 86 3.0 1.5 2.2 1.9 97 chr3L 25842486 intron CG40178 - chr3L 25842534 intron CG40178 - chr3L 25842583 intron CG40178 - chr3L_6_25840001 chr3L_25840001 RAL-705 1243 chr3L 26009433 26009443 chr3L 26009524 26009531 4 90 2.0 2.0 2.0 1.3 98 chr3L 26009433 intron CG40178 - chr3L 26009482 intron CG40178 - chr3L 26009531 intron CG40178 - chr3L_4_26005001 chr3L_26005001 RAL-705 1244 chr3L 22908066 22908066 chr3L 26014451 26014453 Porto1 5 3106386 13.5 5.0 9.2 0.5 3106387 chr3L 22908066 intergenic not near genes chr3L 24461260 intergenic not near genes chr3L 26014453 intergenic CG40178 - chr3L_5_24460001 chr3L_24460001 RAL-705 1245 chr3L 23535677 23535682 chr3L 26026748 26026749 Max-element 4 2491068 10.0 14.5 12.2 0.3 2491072 chr3L 23535677 intergenic not near genes chr3L 24781213 intergenic not near genes chr3L 26026749 intergenic not near genes chr3L_4_24780001 chr3L_24780001 RAL-705 1246 chr3L 26694929 26694952 chr3L 26695007 26695032 6 80 1.0 0.5 0.8 3.3 103 chr3L 26694929 intergenic not near genes chr3L 26694980 intergenic not near genes chr3L 26695032 intergenic not near genes chr3L_6_26690001 chr3L_26690001 RAL-705 1247 chr3L 27368880 27368900 chr3L 27369425 27369444 5 545 0.5 2.0 1.2 2.3 564 chr3L 27368880 intron Dbp80 + chr3L 27369162 intron Dbp80 + chr3L 27369444 intron Dbp80 + chr3L_5_27365001 chr3L_27365001 RAL-705 1248 chr3L 22908066 22908067 chr3L 27698695 27698695 micropia 5 4790628 13.5 2.5 8.0 0.6 4790629 chr3L 22908066 intergenic not near genes chr3L 25303380 intron CG40467 - chr3L 27698695 intergenic not near genes chr3L_5_25300001 chr3L_25300001 RAL-705 1249 chr3L 27980696 27980730 chr3L 27985494 27985528 Doc 9 4798 0.0 1.0 0.5 6.0 4832 chr3L 27980696 intron CG17514 - chr3L 27983112 intron CG17514 - chr3L 27985528 intron CG17514 - chr3L_9_27980001 chr3L_27980001 RAL-705 1250 chr3R 1939052 1939084 chr3R 1939146 1939178 6 94 1.0 2.5 1.8 2.1 126 chr3R 1939052 intergenic not near genes chr3R 1939115 intergenic not near genes chr3R 1939178 intergenic not near genes chr3R_6_1935001 chr3R_1935001 RAL-705 1251 chr3R 2534155 2534167 chr3R 2541702 2541736 6 7564 6.5 10.5 8.5 0.6 7581 chr3R 2534155 intergenic not near genes chr3R 2537946 intergenic not near genes chr3R 2541736 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-705 1252 chr3R 4012498 4012527 chr3R 4012587 4012616 4 89 1.5 1.0 1.2 1.8 118 chr3R 4012498 intergenic not near genes chr3R 4012557 intergenic not near genes chr3R 4012616 intergenic not near genes chr3R_4_4010001 chr3R_4010001 RAL-705 1253 chr3R 4206077 4206103 chr3R 4211652 4211678 mdg3 6 5575 2.0 3.5 2.8 1.6 5601 chr3R 4206077 intron CG14636 - chr3R 4208878 intron CG14636 - chr3R 4211678 intron CG14636 - chr3R_6_4205001 chr3R_4205001 RAL-705 1254 chr3R 4366760 4366781 chr3R 4375143 4375164 roo 6 8383 3.0 4.0 3.5 1.3 8404 chr3R 4366760 3` UTR CG1090 + chr3R 4370962 intergenic not near genes chr3R 4375164 5` UTR CR44922 + chr3R_6_4370001 chr3R_4370001 RAL-705 1255 chr3R 4420577 4420653 chr3R 4420653 4420764 6 111 0.0 0.0 0.0 6.0 187 chr3R 4420577 intergenic not near genes chr3R 4420670 intergenic not near genes chr3R 4420764 intergenic not near genes chr3R_6_4420001 chr3R_4420001 RAL-705 1256 chr3R 4604979 4604995 chr3R 4605340 4605357 4 362 2.0 2.5 2.2 1.2 378 chr3R 4604979 intergenic not near genes chr3R 4605168 intergenic not near genes chr3R 4605357 intergenic not near genes chr3R_4_4605001 chr3R_4605001 RAL-705 1257 chr3R 4609545 4609582 chr3R 4610709 4610744 1360 9 1163 2.5 2.5 2.5 2.6 1199 chr3R 4609545 intergenic not near genes chr3R 4610144 intergenic not near genes chr3R 4610744 intergenic not near genes chr3R_9_4610001 chr3R_4610001 RAL-705 1258 chr3R 4621639 4621665 chr3R 4621728 4621755 8 88 0.5 2.5 1.5 3.2 116 chr3R 4621639 intron 5-HT2A + chr3R 4621697 intron 5-HT2A + chr3R 4621755 intron 5-HT2A + chr3R_8_4620001 chr3R_4620001 RAL-705 1259 chr3R 4628366 4628390 chr3R 4628492 4628515 4 125 14.0 10.5 12.2 0.3 149 chr3R 4628366 intron 5-HT2A + chr3R 4628440 intron 5-HT2A + chr3R 4628515 intron 5-HT2A + chr3R_4_4625001 chr3R_4625001 RAL-705 1260 chr3R 4683185 4683209 chr3R 4684943 4684968 S-element 6 1759 2.5 1.5 2.0 2.0 1783 chr3R 4683185 intron CG43427 + chr3R 4684076 intron CG43427 + chr3R 4684968 intron CG43427 + chr3R_6_4680001 chr3R_4680001 RAL-705 1261 chr3R 4753242 4753268 chr3R 4757545 4757571 F-element 7 4303 2.5 5.0 3.8 1.5 4329 chr3R 4753242 intron,intron atms +,CG44098 - chr3R 4755406 intron,intron atms +,CG44098 - chr3R 4757571 intron,exon atms +,CG44098 - chr3R_7_4755001 chr3R_4755001 RAL-705 1262 chr3R 4759723 4759754 chr3R 4761219 4761251 hopper2 9 1497 1.5 5.0 3.2 2.1 1528 chr3R 4759723 intron,intron atms +,CG44098 - chr3R 4760487 intron,intron atms +,CG44098 - chr3R 4761251 intron,intron atms +,CG44098 - chr3R_9_4760001 chr3R_4760001 RAL-705 1263 chr3R 4769160 4769184 chr3R 4769236 4769262 11 78 2.0 2.5 2.2 3.4 102 chr3R 4769160 intron,intron atms +,CG44098 - chr3R 4769211 intron,intron atms +,CG44098 - chr3R 4769262 intron,intron atms +,CG44098 - chr3R_11_4765001 chr3R_4765001 RAL-705 1264 chr3R 4861571 4861595 chr3R 4861652 4861676 10 80 3.0 4.0 3.5 2.2 105 chr3R 4861571 intron opa + chr3R 4861624 intron opa + chr3R 4861676 intron opa + chr3R_10_4860001 chr3R_4860001 RAL-705 1265 chr3R 4896293 4896314 chr3R 4896386 4896407 4 93 2.5 0.5 1.5 1.6 114 chr3R 4896293 intergenic CR45580 + chr3R 4896350 intergenic CR45580 + chr3R 4896407 intergenic CR45580 + chr3R_4_4895001 chr3R_4895001 RAL-705 1266 chr3R 5045844 5045859 chr3R 5052946 5052961 HMS-Beagle 7 7102 6.0 1.0 3.5 1.6 7117 chr3R 5045844 intron CR43635 - chr3R 5049402 intergenic not near genes chr3R 5052961 intergenic CR45588 - chr3R_7_5045001 chr3R_5045001 RAL-705 1267 chr3R 5067982 5068012 chr3R 5073499 5073529 mdg3 6 5517 3.0 4.0 3.5 1.3 5547 chr3R 5067982 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073529 intergenic not near genes chr3R_6_5070001 chr3R_5070001 RAL-705 1268 chr3R 5105556 5105579 chr3R 5105638 5105662 5 82 1.0 3.5 2.2 1.6 106 chr3R 5105556 intergenic not near genes chr3R 5105609 intergenic not near genes chr3R 5105662 intergenic not near genes chr3R_5_5105001 chr3R_5105001 RAL-705 1269 chr3R 5236222 5236242 chr3R 5236350 5236370 7 128 2.0 3.5 2.8 1.8 148 chr3R 5236222 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236296 3` UTR rtp - chr3R 5236370 3` UTR rtp - chr3R_7_5235001 chr3R_5235001 RAL-705 1270 chr3R 5250882 5250914 chr3R 5250994 5251024 4 110 2.0 2.0 2.0 1.3 142 chr3R 5250882 intron CG12163 - chr3R 5250953 intron CG12163 - chr3R 5251024 intron CG12163 - chr3R_4_5250001 chr3R_5250001 RAL-705 1271 chr3R 5278092 5278120 chr3R 5278171 5278201 10 81 2.5 3.5 3.0 2.5 109 chr3R 5278092 intron mtd - chr3R 5278146 intron mtd - chr3R 5278201 intron mtd - chr3R_10_5275001 chr3R_5275001 RAL-705 1272 chr3R 5338396 5338429 chr3R 5343573 5343606 Rt1c 21 5177 6.5 4.0 5.2 3.4 5210 chr3R 5338396 intron mtd - chr3R 5341001 intron mtd - chr3R 5343606 intron mtd - chr3R_21_5340001 chr3R_5340001 RAL-705 1273 chr3R 5400506 5400538 chr3R 5400589 5400621 7 83 2.0 2.5 2.2 2.2 115 chr3R 5400506 intergenic CG2663 - chr3R 5400564 intergenic CG2663 - chr3R 5400621 3` UTR CG2663 - chr3R_7_5400001 chr3R_5400001 RAL-705 1274 chr3R 5427960 5427976 chr3R 5431902 5431917 4 3942 2.5 4.5 3.5 0.9 3957 chr3R 5427960 intron CG14669 + chr3R 5429938 intron CG14669 + chr3R 5431917 intron CG14669 + chr3R_4_5425001 chr3R_5425001 RAL-705 1275 chr3R 5436921 5436954 chr3R 5437006 5437039 7 85 3.5 3.0 3.2 1.7 118 chr3R 5436921 intron CG14669 + chr3R 5436980 intron CG14669 + chr3R 5437039 intron CG14669 + chr3R_7_5435001 chr3R_5435001 RAL-705 1276 chr3R 5445967 5445992 chr3R 5452427 5452452 Burdock 10 6460 2.0 3.5 2.8 2.6 6485 chr3R 5445967 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452452 intron CG14669 + chr3R_10_5445001 chr3R_5445001 RAL-705 1277 chr3R 5622880 5622898 chr3R 5623074 5623093 6 195 2.5 3.5 3.0 1.5 213 chr3R 5622880 intron,intron Spec2 -,CG2911 - chr3R 5622986 intron,intron Spec2 -,CG2911 - chr3R 5623093 intron,intron Spec2 -,CG2911 - chr3R_6_5620001 chr3R_5620001 RAL-705 1278 chr3R 5746013 5746039 chr3R 5746254 5746280 pogo 6 241 3.0 3.0 3.0 1.5 267 chr3R 5746013 3` UTR Madm + chr3R 5746146 3` UTR Madm + chr3R 5746280 3` UTR Madm + chr3R_6_5745001 chr3R_5745001 RAL-705 1279 chr3R 5747011 5747032 chr3R 5753202 5753223 diver 4 6191 1.5 1.0 1.2 1.8 6212 chr3R 5747011 intergenic Madm + chr3R 5750117 intergenic not near genes chr3R 5753223 intergenic CG2091 - chr3R_4_5750001 chr3R_5750001 RAL-705 1280 chr3R 5786071 5786097 chr3R 5786201 5786229 6 131 4.0 4.0 4.0 1.2 158 chr3R 5786071 intron kat-60L1 + chr3R 5786150 intron kat-60L1 + chr3R 5786229 intron kat-60L1 + chr3R_6_5785001 chr3R_5785001 RAL-705 1281 chr3R 5809114 5809135 chr3R 5809355 5809376 pogo 7 241 4.0 5.0 4.5 1.3 262 chr3R 5809114 3` UTR CG11000 + chr3R 5809245 3` UTR CG11000 + chr3R 5809376 3` UTR CG11000 + chr3R_7_5805001 chr3R_5805001 RAL-705 1282 chr3R 5822389 5822412 chr3R 5823555 5823579 1360 7 1166 1.5 3.5 2.5 2.0 1190 chr3R 5822389 3` UTR CG2023 - chr3R 5822984 3` UTR CG2023 - chr3R 5823579 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 RAL-705 1283 chr3R 5913769 5913783 chr3R 5913847 5913861 5 78 2.5 4.0 3.2 1.2 92 chr3R 5913769 intron CG34113 - chr3R 5913815 intron CG34113 - chr3R 5913861 intron CG34113 - chr3R_5_5910001 chr3R_5910001 RAL-705 1284 chr3R 5927559 5927586 chr3R 5927799 5927826 pogo 8 240 0.5 2.5 1.5 3.2 267 chr3R 5927559 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927826 intron CG34113 - chr3R_8_5925001 chr3R_5925001 RAL-705 1285 chr3R 5942479 5942500 chr3R 5942577 5942598 6 98 1.5 3.0 2.2 1.9 119 chr3R 5942479 intron CG34113 - chr3R 5942538 intron CG34113 - chr3R 5942598 intron CG34113 - chr3R_6_5940001 chr3R_5940001 RAL-705 1286 chr3R 5989344 5989368 chr3R 5989427 5989451 4 83 3.0 0.5 1.8 1.4 107 chr3R 5989344 5` UTR CR44927 + chr3R 5989398 5` UTR CR44927 + chr3R 5989451 5` UTR CR44927 + chr3R_4_5985001 chr3R_5985001 RAL-705 1287 chr3R 6015970 6015993 chr3R 6024470 6024494 Tirant 4 8501 1.0 0.5 0.8 2.2 8524 chr3R 6015970 intergenic not near genes chr3R 6020232 intergenic not near genes chr3R 6024494 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-705 1288 chr3R 6110446 6110474 chr3R 6110630 6110658 5 184 3.0 1.0 2.0 1.7 212 chr3R 6110446 exon Obp83ef - chr3R 6110552 intron Obp83ef - chr3R 6110658 intron Obp83ef - chr3R_5_6110001 chr3R_6110001 RAL-705 1289 chr3R 6133137 6133168 chr3R 6133223 6133256 7 87 2.5 4.5 3.5 1.6 119 chr3R 6133137 intergenic not near genes chr3R 6133196 intergenic not near genes chr3R 6133256 intergenic not near genes chr3R_7_6130001 chr3R_6130001 RAL-705 1290 chr3R 6158521 6158539 chr3R 6167104 6167122 Tirant 8 8582 3.5 3.5 3.5 1.8 8601 chr3R 6158521 intergenic not near genes chr3R 6162822 intergenic not near genes chr3R 6167122 intergenic CG1077 + chr3R_8_6160001 chr3R_6160001 RAL-705 1291 chr3R 6175171 6175195 chr3R 6182443 6182467 HMS-Beagle2 8 7271 0.0 0.0 0.0 8.0 7296 chr3R 6175171 intergenic Osi1 + chr3R 6178819 intron CR45194 + chr3R 6182467 intergenic CR45194 + chr3R_8_6175001 chr3R_6175001 RAL-705 1292 chr3R 6428808 6428825 chr3R 6428910 6428922 6 100 1.5 2.0 1.8 2.1 114 chr3R 6428808 intron gpp + chr3R 6428865 intron gpp + chr3R 6428922 intron gpp + chr3R_6_6425001 chr3R_6425001 RAL-705 1293 chr3R 6510025 6510039 chr3R 6515105 6515120 jockey 7 5081 2.5 1.5 2.0 2.3 5095 chr3R 6510025 intergenic not near genes chr3R 6512572 intergenic not near genes chr3R 6515120 intergenic not near genes chr3R_7_6510001 chr3R_6510001 RAL-705 1294 chr3R 6689341 6689371 chr3R 6689422 6689453 7 82 2.0 3.5 2.8 1.8 112 chr3R 6689341 intergenic Ccp84Af - chr3R 6689397 intergenic Ccp84Af - chr3R 6689453 intergenic Ccp84Af - chr3R_7_6685001 chr3R_6685001 RAL-705 1295 chr3R 6705700 6705721 chr3R 6705924 6705945 5 224 1.5 1.5 1.5 2.0 245 chr3R 6705700 intergenic not near genes chr3R 6705822 intergenic not near genes chr3R 6705945 intergenic not near genes chr3R_5_6705001 chr3R_6705001 RAL-705 1296 chr3R 6737509 6737531 chr3R 6739295 6739318 Doc 6 1786 3.0 2.5 2.8 1.6 1809 chr3R 6737509 intron pb - chr3R 6738414 intron pb - chr3R 6739318 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-705 1297 chr3R 6856384 6856390 chr3R 6856501 6856507 4 117 2.5 1.0 1.8 1.4 123 chr3R 6856384 intergenic not near genes chr3R 6856446 intergenic not near genes chr3R 6856507 intergenic not near genes chr3R_4_6855001 chr3R_6855001 RAL-705 1298 chr3R 6862222 6862253 chr3R 6862309 6862340 9 87 3.0 1.5 2.2 2.8 118 chr3R 6862222 intergenic not near genes chr3R 6862281 intergenic not near genes chr3R 6862340 intergenic not near genes chr3R_9_6860001 chr3R_6860001 RAL-705 1299 chr3R 6910185 6910211 chr3R 6910282 6910308 10 97 2.5 3.5 3.0 2.5 123 chr3R 6910185 intron Antp - chr3R 6910246 5` UTR Antp - chr3R 6910308 5` UTR Antp - chr3R_10_6910001 chr3R_6910001 RAL-705 1300 chr3R 6958933 6958954 chr3R 6959144 6959165 7 211 3.0 6.0 4.5 1.3 232 chr3R 6958933 intron Antp - chr3R 6959049 intron Antp - chr3R 6959165 intron Antp - chr3R_7_6955001 chr3R_6955001 RAL-705 1301 chr3R 7103286 7103310 chr3R 7103361 7103386 8 75 2.5 2.5 2.5 2.3 100 chr3R 7103286 intron Alh - chr3R 7103336 intron Alh - chr3R 7103386 intron Alh - chr3R_8_7100001 chr3R_7100001 RAL-705 1302 chr3R 7173682 7173706 chr3R 7173762 7173786 7 80 3.5 4.5 4.0 1.4 104 chr3R 7173682 intron sas + chr3R 7173734 intron sas + chr3R 7173786 intron sas + chr3R_7_7170001 chr3R_7170001 RAL-705 1303 chr3R 7281047 7281075 chr3R 7281139 7281167 6 92 2.0 4.0 3.0 1.5 120 chr3R 7281047 intron rn - chr3R 7281107 intron rn - chr3R 7281167 intron rn - chr3R_6_7280001 chr3R_7280001 RAL-705 1304 chr3R 7306324 7306353 chr3R 7309760 7309789 10 3436 17.0 18.0 17.5 0.5 3465 chr3R 7306324 intron rn - chr3R 7308056 exon rn - chr3R 7309789 intergenic rn - chr3R_10_7305001 chr3R_7305001 RAL-705 1305 chr3R 7356216 7356241 chr3R 7356308 7356334 15 93 4.0 1.5 2.8 3.9 118 chr3R 7356216 intergenic not near genes chr3R 7356275 intergenic not near genes chr3R 7356334 intergenic not near genes chr3R_15_7355001 chr3R_7355001 RAL-705 1306 chr3R 7358166 7358192 chr3R 7358261 7358289 5 97 1.0 2.5 1.8 1.8 123 chr3R 7358166 intergenic not near genes chr3R 7358228 intergenic not near genes chr3R 7358289 intergenic not near genes chr3R_5_7355001 chr3R_7355001 RAL-705 1307 chr3R 7412100 7412114 chr3R 7412204 7412219 7 105 2.5 1.0 1.8 2.5 119 chr3R 7412100 intergenic not near genes chr3R 7412160 intergenic not near genes chr3R 7412219 intergenic not near genes chr3R_7_7410001 chr3R_7410001 RAL-705 1308 chr3R 7447389 7447408 chr3R 7447712 7447731 8 323 1.0 4.0 2.5 2.3 342 chr3R 7447389 intergenic not near genes chr3R 7447560 intergenic not near genes chr3R 7447731 intergenic not near genes chr3R_8_7445001 chr3R_7445001 RAL-705 1309 chr3R 7533023 7533055 chr3R 7533280 7533312 16 257 1.5 3.5 2.5 4.6 289 chr3R 7533023 intergenic alphaTub84D +,alpha-Est5 - chr3R 7533168 intergenic alpha-Est5 -,alphaTub84D + chr3R 7533312 intergenic alpha-Est5 - chr3R_16_7530001 chr3R_7530001 RAL-705 1310 chr3R 7551357 7551388 chr3R 7551449 7551483 5 94 1.0 1.0 1.0 2.5 126 chr3R 7551357 intergenic not near genes chr3R 7551420 intergenic not near genes chr3R 7551483 intergenic not near genes chr3R_5_7550001 chr3R_7550001 RAL-705 1311 chr3R 7582554 7582580 chr3R 7582637 7582661 5 83 0.0 1.0 0.5 3.3 107 chr3R 7582554 intron CG34127 - chr3R 7582608 intron CG34127 - chr3R 7582661 intron CG34127 - chr3R_5_7580001 chr3R_7580001 RAL-705 1312 chr3R 7617997 7618016 chr3R 7618089 7618108 6 92 1.0 4.0 2.5 1.7 111 chr3R 7617997 intron CG34127 - chr3R 7618052 intron CG34127 - chr3R 7618108 intron CG34127 - chr3R_6_7615001 chr3R_7615001 RAL-705 1313 chr3R 7621553 7621563 chr3R 7621642 7621653 5 89 1.0 3.5 2.2 1.6 100 chr3R 7621553 intron CG34127 - chr3R 7621603 intron CG34127 - chr3R 7621653 intron CG34127 - chr3R_5_7620001 chr3R_7620001 RAL-705 1314 chr3R 7677913 7677939 chr3R 7678026 7678052 7 112 1.5 0.0 0.8 3.9 139 chr3R 7677913 intron Nlg1 + chr3R 7677982 intron Nlg1 + chr3R 7678052 intron Nlg1 + chr3R_7_7675001 chr3R_7675001 RAL-705 1315 chr3R 7694576 7694598 chr3R 7713637 7713659 invader3 5 19061 4.0 1.5 2.8 1.3 19083 chr3R 7694576 3` UTR Nlg1 + chr3R 7704118 intergenic not near genes chr3R 7713659 intergenic not near genes chr3R_5_7700001 chr3R_7700001 RAL-705 1316 chr3R 7729466 7729496 chr3R 7737404 7737434 Stalker2 8 7938 4.0 3.5 3.8 1.7 7968 chr3R 7729466 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737434 intergenic not near genes chr3R_8_7730001 chr3R_7730001 RAL-705 1317 chr3R 7751381 7751406 chr3R 7751456 7751482 10 75 2.5 5.5 4.0 2.0 101 chr3R 7751381 intergenic not near genes chr3R 7751432 intergenic not near genes chr3R 7751482 intergenic not near genes chr3R_10_7750001 chr3R_7750001 RAL-705 1318 chr3R 7770413 7770439 chr3R 7770508 7770535 5 96 3.0 2.5 2.8 1.3 122 chr3R 7770413 intergenic CG11286 - chr3R 7770474 intergenic CG11286 - chr3R 7770535 intergenic CG11286 - chr3R_5_7770001 chr3R_7770001 RAL-705 1319 chr3R 7822376 7822415 chr3R 7822452 7822487 16 76 1.5 1.5 1.5 6.4 111 chr3R 7822376 intron CG34384 + chr3R 7822432 intron CG34384 + chr3R 7822487 intron CG34384 + chr3R_16_7820001 chr3R_7820001 RAL-705 1320 chr3R 8060307 8060336 chr3R 8060396 8060425 4 89 1.0 1.5 1.2 1.8 118 chr3R 8060307 intron mAChR-B + chr3R 8060366 intron mAChR-B + chr3R 8060425 intron mAChR-B + chr3R_4_8060001 chr3R_8060001 RAL-705 1321 chr3R 8068875 8068900 chr3R 8069026 8069047 8 150 1.5 2.5 2.0 2.7 172 chr3R 8068875 intron mAChR-B + chr3R 8068961 intron mAChR-B + chr3R 8069047 intron mAChR-B + chr3R_8_8065001 chr3R_8065001 RAL-705 1322 chr3R 8070909 8070929 chr3R 8070990 8071010 8 81 3.5 2.5 3.0 2.0 101 chr3R 8070909 intron mAChR-B + chr3R 8070960 intron mAChR-B + chr3R 8071010 intron mAChR-B + chr3R_8_8070001 chr3R_8070001 RAL-705 1323 chr3R 8090272 8090302 chr3R 8090449 8090477 10 177 1.0 2.0 1.5 4.0 205 chr3R 8090272 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090477 intergenic CR44330 + chr3R_10_8090001 chr3R_8090001 RAL-705 1324 chr3R 8094406 8094433 chr3R 8099711 8099738 Transpac 6 5305 3.5 1.0 2.2 1.9 5332 chr3R 8094406 intron CG7900 + chr3R 8097072 intron CG7900 + chr3R 8099738 intron CG7900 + chr3R_6_8095001 chr3R_8095001 RAL-705 1325 chr3R 8145859 8145884 chr3R 8145969 8145994 10 110 4.0 3.5 3.8 2.1 135 chr3R 8145859 intergenic not near genes chr3R 8145926 intergenic not near genes chr3R 8145994 intergenic not near genes chr3R_10_8145001 chr3R_8145001 RAL-705 1326 chr3R 8162689 8162712 chr3R 8162811 8162831 7 121 5.5 2.5 4.0 1.4 142 chr3R 8162689 intron grn - chr3R 8162760 intron grn - chr3R 8162831 intron grn - chr3R_7_8160001 chr3R_8160001 RAL-705 1327 chr3R 8207559 8207588 chr3R 8208404 8208433 F-element 6 845 1.5 3.0 2.2 1.9 874 chr3R 8207559 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208433 intergenic not near genes chr3R_6_8205001 chr3R_8205001 RAL-705 1328 chr3R 8339241 8339246 chr3R 21907534 21907536 19 13568290 14.0 21.5 17.8 1.0 13568295 chr3R 8339241 intergenic not near genes chr3R 15123388 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_19_15120001 chr3R_15120001 RAL-705 1329 chr3R 8339247 8339247 chr3R 21907534 21907536 13 13568288 14.0 21.5 17.8 0.7 13568289 chr3R 8339247 intergenic not near genes chr3R 15123392 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_13_15120001 chr3R_15120001 RAL-705 1330 chr3R 8403005 8403036 chr3R 8412171 8412201 roo 14 9166 4.0 4.0 4.0 2.8 9196 chr3R 8403005 intron CG45263 - chr3R 8407603 intron CG45263 - chr3R 8412201 intron CG45263 - chr3R_14_8405001 chr3R_8405001 RAL-705 1331 chr3R 8463800 8463822 chr3R 8463886 8463908 10 86 4.0 3.5 3.8 2.1 108 chr3R 8463800 intron CG45263 - chr3R 8463854 intron CG45263 - chr3R 8463908 intron CG45263 - chr3R_10_8460001 chr3R_8460001 RAL-705 1332 chr3R 8506732 8506765 chr3R 8506996 8507027 7 264 1.5 3.0 2.2 2.2 295 chr3R 8506732 intergenic not near genes chr3R 8506880 intergenic not near genes chr3R 8507027 intergenic not near genes chr3R_7_8505001 chr3R_8505001 RAL-705 1333 chr3R 8537181 8537202 chr3R 8537489 8537513 6 310 2.5 3.0 2.8 1.6 332 chr3R 8537181 intergenic not near genes chr3R 8537347 intergenic not near genes chr3R 8537513 intergenic not near genes chr3R_6_8535001 chr3R_8535001 RAL-705 1334 chr3R 8552367 8552400 chr3R 8552446 8552480 9 80 3.0 2.5 2.8 2.4 113 chr3R 8552367 intergenic Or85d + chr3R 8552424 intergenic Or85d + chr3R 8552480 intergenic Or85d + chr3R_9_8550001 chr3R_8550001 RAL-705 1335 chr3R 8570477 8570496 chr3R 8575113 8575132 HMS-Beagle 4 4636 4.5 3.0 3.8 0.8 4655 chr3R 8570477 intergenic not near genes chr3R 8572804 intergenic not near genes chr3R 8575132 intergenic not near genes chr3R_4_8570001 chr3R_8570001 RAL-705 1336 chr3R 8587603 8587624 chr3R 8587839 8587860 7 235 2.5 3.5 3.0 1.8 257 chr3R 8587603 intron 5-HT2B + chr3R 8587732 intron 5-HT2B + chr3R 8587860 intron 5-HT2B + chr3R_7_8585001 chr3R_8585001 RAL-705 1337 chr3R 8601766 8601790 chr3R 8610919 8610943 roo 4 9153 5.0 5.0 5.0 0.7 9177 chr3R 8601766 intron 5-HT2B + chr3R 8606354 intron 5-HT2B + chr3R 8610943 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-705 1338 chr3R 8621540 8621549 chr3R 8621617 8621625 4 76 5.5 5.5 5.5 0.6 85 chr3R 8621540 intron 5-HT2B + chr3R 8621582 intron 5-HT2B + chr3R 8621625 intron 5-HT2B + chr3R_4_8620001 chr3R_8620001 RAL-705 1339 chr3R 8642431 8642442 chr3R 8642508 8642519 5 77 0.5 4.0 2.2 1.6 88 chr3R 8642431 intergenic not near genes chr3R 8642475 intergenic not near genes chr3R 8642519 intergenic not near genes chr3R_5_8640001 chr3R_8640001 RAL-705 1340 chr3R 8671103 8671136 chr3R 8671179 8671210 11 75 2.5 3.0 2.8 2.9 107 chr3R 8671103 intron CG8036 + chr3R 8671156 intron CG8036 + chr3R 8671210 intron CG8036 + chr3R_11_8670001 chr3R_8670001 RAL-705 1341 chr3R 8685300 8685315 chr3R 8685400 8685415 4 100 1.5 2.0 1.8 1.4 115 chr3R 8685300 intron CR44937 - chr3R 8685358 intron CR44937 - chr3R 8685415 intron CR44937 - chr3R_4_8685001 chr3R_8685001 RAL-705 1342 chr3R 8707354 8707382 chr3R 8709795 8709822 jockey 6 2440 2.5 2.0 2.2 1.9 2468 chr3R 8707354 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709822 intergenic not near genes chr3R_6_8705001 chr3R_8705001 RAL-705 1343 chr3R 8875538 8875573 chr3R 8875615 8875647 10 76 0.5 1.5 1.0 5.0 109 chr3R 8875538 intron pyd - chr3R 8875592 intron pyd - chr3R 8875647 intron pyd - chr3R_10_8875001 chr3R_8875001 RAL-705 1344 chr3R 8894872 8894905 chr3R 8896028 8896061 1360 9 1156 4.0 1.0 2.5 2.6 1189 chr3R 8894872 intron pyd - chr3R 8895466 intron pyd - chr3R 8896061 intron pyd - chr3R_9_8895001 chr3R_8895001 RAL-705 1345 chr3R 8917892 8917908 chr3R 8917972 8917988 4 80 3.0 3.0 3.0 1.0 96 chr3R 8917892 intron pyd - chr3R 8917940 intron pyd - chr3R 8917988 intron pyd - chr3R_4_8915001 chr3R_8915001 RAL-705 1346 chr3R 8940125 8940155 chr3R 8940215 8940245 6 90 3.0 3.0 3.0 1.5 120 chr3R 8940125 intron skap + chr3R 8940185 intron skap + chr3R 8940245 intron skap + chr3R_6_8940001 chr3R_8940001 RAL-705 1347 chr3R 9073744 9073777 chr3R 9074012 9074048 12 271 3.0 1.0 2.0 4.0 304 chr3R 9073744 intron pum - chr3R 9073896 intron pum - chr3R 9074048 intron pum - chr3R_12_9070001 chr3R_9070001 RAL-705 1348 chr3R 9101839 9101867 chr3R 9101937 9101965 9 98 1.0 2.5 1.8 3.2 126 chr3R 9101839 intron pum - chr3R 9101902 intron pum - chr3R 9101965 intron pum - chr3R_9_9100001 chr3R_9100001 RAL-705 1349 chr3R 9141144 9141168 chr3R 9141227 9141252 11 84 1.5 1.0 1.2 5.0 108 chr3R 9141144 intron pum - chr3R 9141198 intron pum - chr3R 9141252 intron pum - chr3R_11_9140001 chr3R_9140001 RAL-705 1350 chr3R 9227934 9227965 chr3R 9228048 9228079 8 114 1.5 1.5 1.5 3.2 145 chr3R 9227934 intron pum - chr3R 9228006 intron pum - chr3R 9228079 intron pum - chr3R_8_9225001 chr3R_9225001 RAL-705 1351 chr3R 9319575 9319604 chr3R 9320008 9320036 jockey 7 434 4.5 3.0 3.8 1.5 461 chr3R 9319575 intron CG8861 - chr3R 9319806 intron CG8861 - chr3R 9320036 intron CG8861 - chr3R_7_9315001 chr3R_9315001 RAL-705 1352 chr3R 9361824 9361844 chr3R 9362065 9362085 pogo 6 241 1.5 2.5 2.0 2.0 261 chr3R 9361824 3` UTR CG45050 + chr3R 9361954 3` UTR CG45050 + chr3R 9362085 3` UTR CG45050 + chr3R_6_9360001 chr3R_9360001 RAL-705 1353 chr3R 9382819 9382846 chr3R 9382944 9382971 9 125 1.5 0.5 1.0 4.5 152 chr3R 9382819 intron FER - chr3R 9382895 intron FER - chr3R 9382971 intron FER - chr3R_9_9380001 chr3R_9380001 RAL-705 1354 chr3R 9601465 9601484 chr3R 9601583 9601602 4 118 2.0 3.5 2.8 1.1 137 chr3R 9601465 intron CG8312 + chr3R 9601534 intron CG8312 + chr3R 9601602 intron CG8312 + chr3R_4_9600001 chr3R_9600001 RAL-705 1355 chr3R 9620954 9620956 chr3R 21907534 21907536 9 12286580 5.0 21.5 13.2 0.6 12286582 chr3R 9620954 intron CG8312 + chr3R 15764245 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_9_15760001 chr3R_15760001 RAL-705 1356 chr3R 10068974 10069000 chr3R 10069083 10069107 8 109 1.0 5.0 3.0 2.0 133 chr3R 10068974 intergenic CG33784 + chr3R 10069040 intergenic CG33784 + chr3R 10069107 intergenic not near genes chr3R_8_10065001 chr3R_10065001 RAL-705 1357 chr3R 10073770 10073791 chr3R 10073879 10073900 7 109 2.5 3.0 2.8 1.8 130 chr3R 10073770 intergenic nerfin-2 +,CG5361 - chr3R 10073835 3` UTR CG5361 - chr3R 10073900 exon CG5361 - chr3R_7_10070001 chr3R_10070001 RAL-705 1358 chr3R 10231803 10231815 chr3R 10237380 10237392 mdg3 4 5577 0.0 4.5 2.2 1.2 5589 chr3R 10231803 intron CG42795 + chr3R 10234598 intron CG42795 + chr3R 10237392 intron CG42795 + chr3R_4_10230001 chr3R_10230001 RAL-705 1359 chr3R 10646103 10646130 chr3R 10646254 10646281 6 151 2.0 0.5 1.2 2.7 178 chr3R 10646103 intergenic CR44018 + chr3R 10646192 intergenic CR44018 + chr3R 10646281 intergenic not near genes chr3R_6_10645001 chr3R_10645001 RAL-705 1360 chr3R 10724671 10724695 chr3R 10724824 10724848 7 153 2.0 2.5 2.2 2.2 177 chr3R 10724671 intergenic not near genes chr3R 10724760 intergenic not near genes chr3R 10724848 intergenic not near genes chr3R_7_10720001 chr3R_10720001 RAL-705 1361 chr3R 10727642 10727676 chr3R 10727722 10727755 9 79 4.5 2.5 3.5 2.0 113 chr3R 10727642 intergenic not near genes chr3R 10727698 intergenic not near genes chr3R 10727755 intergenic not near genes chr3R_9_10725001 chr3R_10725001 RAL-705 1362 chr3R 10804170 10804199 chr3R 10811702 10811731 17.6 12 7531 3.5 1.5 2.5 3.4 7561 chr3R 10804170 intergenic CG14692 - chr3R 10807950 intergenic not near genes chr3R 10811731 3` UTR CG14693 - chr3R_12_10805001 chr3R_10805001 RAL-705 1363 chr3R 10904912 10904930 chr3R 10905114 10905134 7 204 0.5 1.0 0.8 3.9 222 chr3R 10904912 intergenic not near genes chr3R 10905023 intergenic not near genes chr3R 10905134 intergenic not near genes chr3R_7_10905001 chr3R_10905001 RAL-705 1364 chr3R 10906838 10906853 chr3R 10906914 10906929 5 75 1.5 3.5 2.5 1.4 91 chr3R 10906838 intergenic not near genes chr3R 10906884 intergenic not near genes chr3R 10906929 intergenic not near genes chr3R_5_10905001 chr3R_10905001 RAL-705 1365 chr3R 10919686 10919714 chr3R 10919762 10919792 10 78 5.0 4.5 4.8 1.7 106 chr3R 10919686 intergenic not near genes chr3R 10919739 intergenic not near genes chr3R 10919792 intergenic not near genes chr3R_10_10915001 chr3R_10915001 RAL-705 1366 chr3R 10920053 10920079 chr3R 10920131 10920157 6 78 2.5 4.5 3.5 1.3 104 chr3R 10920053 intergenic not near genes chr3R 10920105 intergenic not near genes chr3R 10920157 intergenic not near genes chr3R_6_10920001 chr3R_10920001 RAL-705 1367 chr3R 11048590 11048605 chr3R 11048674 11048689 4 84 1.0 0.5 0.8 2.2 99 chr3R 11048590 3` UTR CG34114 + chr3R 11048640 3` UTR CG34114 + chr3R 11048689 3` UTR CG34114 + chr3R_4_11045001 chr3R_11045001 RAL-705 1368 chr3R 11056894 11056909 chr3R 11056972 11056987 4 78 1.0 0.0 0.5 2.7 93 chr3R 11056894 intergenic not near genes chr3R 11056940 intergenic not near genes chr3R 11056987 intergenic not near genes chr3R_4_11055001 chr3R_11055001 RAL-705 1369 chr3R 11085459 11085486 chr3R 11085536 11085563 7 77 0.0 1.5 0.8 3.9 104 chr3R 11085459 3` UTR CR44940 - chr3R 11085511 intergenic CR44940 - chr3R 11085563 intergenic CR44940 - chr3R_7_11085001 chr3R_11085001 RAL-705 1370 chr3R 11102322 11102355 chr3R 11102403 11102433 15 81 3.5 2.5 3.0 3.8 111 chr3R 11102322 intergenic not near genes chr3R 11102378 intergenic not near genes chr3R 11102433 intergenic not near genes chr3R_15_11100001 chr3R_11100001 RAL-705 1371 chr3R 11261230 11261251 chr3R 11261326 11261347 6 96 5.5 0.5 3.0 1.5 117 chr3R 11261230 intergenic not near genes chr3R 11261288 intergenic not near genes chr3R 11261347 intergenic not near genes chr3R_6_11260001 chr3R_11260001 RAL-705 1372 chr3R 11379235 11379263 chr3R 11388390 11388418 roo 11 9155 1.5 2.0 1.8 3.9 9183 chr3R 11379235 intron pros + chr3R 11383826 intron pros + chr3R 11388418 intron pros + chr3R_11_11380001 chr3R_11380001 RAL-705 1373 chr3R 11513846 11513876 chr3R 11513928 11513956 10 82 4.0 2.0 3.0 2.5 110 chr3R 11513846 intergenic not near genes chr3R 11513901 intergenic not near genes chr3R 11513956 intergenic not near genes chr3R_10_11510001 chr3R_11510001 RAL-705 1374 chr3R 11518811 11518846 chr3R 11518902 11518936 7 91 3.5 3.5 3.5 1.6 125 chr3R 11518811 intergenic not near genes chr3R 11518874 intergenic not near genes chr3R 11518936 intergenic not near genes chr3R_7_11515001 chr3R_11515001 RAL-705 1375 chr3R 11664791 11664816 chr3R 11664883 11664908 7 91 3.5 0.5 2.0 2.3 117 chr3R 11664791 intron CG42327 + chr3R 11664850 intron CG42327 + chr3R 11664908 intron CG42327 + chr3R_7_11660001 chr3R_11660001 RAL-705 1376 chr3R 11694723 11694752 chr3R 11694816 11694845 6 92 2.5 3.0 2.8 1.6 122 chr3R 11694723 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694845 intergenic not near genes chr3R_6_11690001 chr3R_11690001 RAL-705 1377 chr3R 11841061 11841094 chr3R 11846252 11846285 BS 11 5190 3.0 1.0 2.0 3.7 5224 chr3R 11841061 intron CG6959 - chr3R 11843673 intron CG6959 - chr3R 11846285 intron CG6959 - chr3R_11_11840001 chr3R_11840001 RAL-705 1378 chr3R 11853614 11853642 chr3R 11853980 11854008 10 366 1.5 2.5 2.0 3.3 394 chr3R 11853614 intron CG6959 - chr3R 11853811 intron CG6959 - chr3R 11854008 intron CG6959 - chr3R_10_11850001 chr3R_11850001 RAL-705 1379 chr3R 11909368 11909391 chr3R 11909446 11909471 5 79 3.0 5.5 4.2 1.0 103 chr3R 11909368 intron Cad87A - chr3R 11909420 intron Cad87A - chr3R 11909471 intron Cad87A - chr3R_5_11905001 chr3R_11905001 RAL-705 1380 chr3R 12022885 12022915 chr3R 12025062 12025092 pogo 9 2177 1.5 4.0 2.8 2.4 2207 chr3R 12022885 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025092 intergenic not near genes chr3R_9_12020001 chr3R_12020001 RAL-705 1381 chr3R 12086365 12086392 chr3R 12086446 12086473 5 81 1.0 1.0 1.0 2.5 108 chr3R 12086365 intron CG14741 - chr3R 12086419 intron CG14741 - chr3R 12086473 intron CG14741 - chr3R_5_12085001 chr3R_12085001 RAL-705 1382 chr3R 12102873 12102884 chr3R 12102973 12102985 4 100 4.0 4.0 4.0 0.8 112 chr3R 12102873 intron dpr17 + chr3R 12102929 intron dpr17 + chr3R 12102985 intron dpr17 + chr3R_4_12100001 chr3R_12100001 RAL-705 1383 chr3R 12267861 12267889 chr3R 12267941 12267968 6 80 1.5 1.5 1.5 2.4 107 chr3R 12267861 intron svp + chr3R 12267914 intron svp + chr3R 12267968 intron svp + chr3R_6_12265001 chr3R_12265001 RAL-705 1384 chr3R 12380112 12380148 chr3R 12380599 12380636 11 488 2.0 4.5 3.2 2.6 524 chr3R 12380112 exon GstD8 + chr3R 12380374 exon GstD8 + chr3R 12380636 exon GstD8 + chr3R_11_12380001 chr3R_12380001 RAL-705 1385 chr3R 12546455 12546470 chr3R 12546538 12546552 6 83 4.0 2.0 3.0 1.5 97 chr3R 12546455 intron Octbeta3R - chr3R 12546504 intron Octbeta3R - chr3R 12546552 intron Octbeta3R - chr3R_6_12545001 chr3R_12545001 RAL-705 1386 chr3R 12720726 12720761 chr3R 12720896 12720931 11 169 0.5 1.5 1.0 5.5 205 chr3R 12720726 intron Men - chr3R 12720828 intron Men - chr3R 12720931 intron Men - chr3R_11_12720001 chr3R_12720001 RAL-705 1387 chr3R 12735804 12735829 chr3R 12735902 12735927 7 98 1.5 1.0 1.2 3.2 123 chr3R 12735804 intergenic not near genes chr3R 12735866 intergenic not near genes chr3R 12735927 intergenic not near genes chr3R_7_12735001 chr3R_12735001 RAL-705 1388 chr3R 12819037 12819052 chr3R 12819120 12819135 6 83 3.0 3.0 3.0 1.5 98 chr3R 12819037 intergenic not near genes chr3R 12819086 intergenic not near genes chr3R 12819135 intergenic not near genes chr3R_6_12815001 chr3R_12815001 RAL-705 1389 chr3R 12825834 12825851 chr3R 12825913 12825931 9 79 1.0 5.0 3.0 2.2 97 chr3R 12825834 intergenic not near genes chr3R 12825882 intergenic not near genes chr3R 12825931 intergenic not near genes chr3R_9_12825001 chr3R_12825001 RAL-705 1390 chr3R 12866492 12866513 chr3R 12866643 12866664 7 151 2.0 1.0 1.5 2.8 172 chr3R 12866492 intergenic not near genes chr3R 12866578 intergenic not near genes chr3R 12866664 intergenic not near genes chr3R_7_12865001 chr3R_12865001 RAL-705 1391 chr3R 12883796 12883822 chr3R 12883915 12883941 6 119 1.5 2.5 2.0 2.0 145 chr3R 12883796 intergenic not near genes chr3R 12883868 intergenic not near genes chr3R 12883941 intergenic not near genes chr3R_6_12880001 chr3R_12880001 RAL-705 1392 chr3R 12894600 12894608 chr3R 12894713 12894721 5 113 0.0 0.0 0.0 5.0 121 chr3R 12894600 intergenic not near genes chr3R 12894660 intergenic not near genes chr3R 12894721 intergenic not near genes chr3R_5_12890001 chr3R_12890001 RAL-705 1393 chr3R 12935359 12935365 chr3R 12935463 12935469 4 104 1.0 0.0 0.5 2.7 110 chr3R 12935359 intergenic not near genes chr3R 12935414 intergenic not near genes chr3R 12935469 intergenic not near genes chr3R_4_12935001 chr3R_12935001 RAL-705 1394 chr3R 12947292 12947312 chr3R 12947454 12947474 5 162 3.0 4.0 3.5 1.1 182 chr3R 12947292 intergenic not near genes chr3R 12947383 intergenic not near genes chr3R 12947474 intergenic not near genes chr3R_5_12945001 chr3R_12945001 RAL-705 1395 chr3R 12972555 12972573 chr3R 12972694 12972712 4 139 2.5 2.0 2.2 1.2 157 chr3R 12972555 intron CG7381 - chr3R 12972634 intron CG7381 - chr3R 12972712 intron CG7381 - chr3R_4_12970001 chr3R_12970001 RAL-705 1396 chr3R 13059967 13059976 chr3R 13060162 13060171 4 195 2.0 1.5 1.8 1.4 204 chr3R 13059967 intron sim + chr3R 13060069 intron sim + chr3R 13060171 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-705 1397 chr3R 13064785 13064786 chr3R 13064884 13064885 4 99 1.5 0.0 0.8 2.2 100 chr3R 13064785 intron sim + chr3R 13064835 intron sim + chr3R 13064885 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-705 1398 chr3R 13067839 13067871 chr3R 13067918 13067951 5 79 2.0 4.0 3.0 1.2 112 chr3R 13067839 intron sim + chr3R 13067895 intron sim + chr3R 13067951 intron sim + chr3R_5_13065001 chr3R_13065001 RAL-705 1399 chr3R 13075359 13075387 chr3R 13075440 13075468 10 81 1.5 0.0 0.8 5.6 109 chr3R 13075359 intron sim + chr3R 13075414 intron sim + chr3R 13075468 intron sim + chr3R_10_13075001 chr3R_13075001 RAL-705 1400 chr3R 13104420 13104420 chr3R 21907534 21907536 4 8803114 19.5 21.5 20.5 0.2 8803116 chr3R 13104420 intron timeout + chr3R 17505978 intergenic Dscam3 - chr3R 21907536 intergenic CG6678 + chr3R_4_17505001 chr3R_17505001 RAL-705 1401 chr3R 13138321 13138352 chr3R 13138409 13138440 7 88 0.0 1.0 0.5 4.7 119 chr3R 13138321 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138380 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138440 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_7_13135001 chr3R_13135001 RAL-705 1402 chr3R 13143044 13143055 chr3R 13148619 13148631 mdg3 4 5575 2.0 2.0 2.0 1.3 5587 chr3R 13143044 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145838 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148631 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-705 1403 chr3R 13379133 13379160 chr3R 13379219 13379246 13 86 2.5 4.5 3.5 2.9 113 chr3R 13379133 intron CG9813 - chr3R 13379190 intron CG9813 - chr3R 13379246 intron CG9813 - chr3R_13_13375001 chr3R_13375001 RAL-705 1404 chr3R 13418665 13418684 chr3R 13418740 13418759 5 76 3.5 1.5 2.5 1.4 94 chr3R 13418665 intergenic not near genes chr3R 13418712 intergenic not near genes chr3R 13418759 intergenic not near genes chr3R_5_13415001 chr3R_13415001 RAL-705 1405 chr3R 13424143 13424168 chr3R 13424235 13424260 9 92 19.5 15.5 17.5 0.5 117 chr3R 13424143 intergenic not near genes chr3R 13424202 intergenic not near genes chr3R 13424260 intergenic not near genes chr3R_9_13420001 chr3R_13420001 RAL-705 1406 chr3R 13525180 13525200 chr3R 13525282 13525302 7 101 4.0 3.0 3.5 1.6 122 chr3R 13525180 intergenic not near genes chr3R 13525241 intergenic not near genes chr3R 13525302 intergenic not near genes chr3R_7_13525001 chr3R_13525001 RAL-705 1407 chr3R 13562615 13562649 chr3R 13562722 13562756 8 107 0.5 1.5 1.0 4.0 141 chr3R 13562615 intergenic not near genes chr3R 13562686 intergenic not near genes chr3R 13562756 intergenic not near genes chr3R_8_13560001 chr3R_13560001 RAL-705 1408 chr3R 13603054 13603073 chr3R 13603145 13603164 8 91 4.0 2.0 3.0 2.0 110 chr3R 13603054 intergenic not near genes chr3R 13603109 intergenic not near genes chr3R 13603164 intergenic not near genes chr3R_8_13600001 chr3R_13600001 RAL-705 1409 chr3R 13693028 13693028 chr3R 21907534 21907536 17 8214507 8.5 21.5 15.0 1.1 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_17_17800001 chr3R_17800001 RAL-705 1410 chr3R 13791701 13791732 chr3R 13791793 13791827 12 95 1.5 2.0 1.8 4.3 126 chr3R 13791701 intergenic not near genes chr3R 13791764 intergenic not near genes chr3R 13791827 intergenic not near genes chr3R_12_13790001 chr3R_13790001 RAL-705 1411 chr3R 13863678 13863713 chr3R 13863766 13863801 13 88 2.0 2.5 2.2 4.1 123 chr3R 13863678 intergenic not near genes chr3R 13863740 intergenic not near genes chr3R 13863801 intergenic not near genes chr3R_13_13860001 chr3R_13860001 RAL-705 1412 chr3R 13880548 13880571 chr3R 13880669 13880692 8 121 0.5 1.5 1.0 4.0 144 chr3R 13880548 intergenic not near genes chr3R 13880620 intergenic not near genes chr3R 13880692 intergenic not near genes chr3R_8_13880001 chr3R_13880001 RAL-705 1413 chr3R 13975380 13975403 chr3R 13975459 13975483 9 80 3.5 4.0 3.8 1.9 103 chr3R 13975380 intron rdx - chr3R 13975432 intron rdx - chr3R 13975483 intron rdx - chr3R_9_13975001 chr3R_13975001 RAL-705 1414 chr3R 14021648 14021663 chr3R 14023465 14023480 S-element 4 1817 4.0 1.5 2.8 1.1 1832 chr3R 14021648 intron rdx - chr3R 14022564 intron rdx - chr3R 14023480 intron rdx - chr3R_4_14020001 chr3R_14020001 RAL-705 1415 chr3R 14136522 14136545 chr3R 14136891 14136914 7 369 1.0 4.0 2.5 2.0 392 chr3R 14136522 intergenic not near genes chr3R 14136718 intergenic not near genes chr3R 14136914 intergenic not near genes chr3R_7_14135001 chr3R_14135001 RAL-705 1416 chr3R 14180811 14180835 chr3R 14185576 14185600 F-element 5 4765 1.0 0.0 0.5 3.3 4789 chr3R 14180811 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185600 intron Dop1R1 - chr3R_5_14180001 chr3R_14180001 RAL-705 1417 chr3R 14194426 14194459 chr3R 14203575 14203608 roo 7 9149 3.0 3.0 3.0 1.8 9182 chr3R 14194426 intron Dop1R1 - chr3R 14199017 intron Dop1R1 - chr3R 14203608 intron Dop1R1 - chr3R_7_14195001 chr3R_14195001 RAL-705 1418 chr3R 14246399 14246413 chr3R 14247892 14247909 jockey 5 1495 3.0 1.5 2.2 1.6 1510 chr3R 14246399 intergenic not near genes chr3R 14247154 intergenic not near genes chr3R 14247909 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-705 1419 chr3R 14253703 14253716 chr3R 14253782 14253794 4 79 1.0 1.5 1.2 1.8 91 chr3R 14253703 intron Aats-met - chr3R 14253748 intron Aats-met - chr3R 14253794 intron Aats-met - chr3R_4_14250001 chr3R_14250001 RAL-705 1420 chr3R 14473219 14473245 chr3R 14473307 14473333 9 88 1.5 2.5 2.0 3.0 114 chr3R 14473219 intron cv-c - chr3R 14473276 intron cv-c - chr3R 14473333 intron cv-c - chr3R_9_14470001 chr3R_14470001 RAL-705 1421 chr3R 14590776 14590781 chr3R 14590856 14590861 5 80 7.0 4.5 5.8 0.7 85 chr3R 14590776 intron stumps + chr3R 14590818 intron stumps + chr3R 14590861 intron stumps + chr3R_5_14590001 chr3R_14590001 RAL-705 1422 chr3R 14664877 14664909 chr3R 14664954 14664986 12 77 0.5 3.5 2.0 4.0 109 chr3R 14664877 intergenic Meltrin -,BigH1 + chr3R 14664932 3` UTR Meltrin - chr3R 14664986 3` UTR Meltrin - chr3R_12_14660001 chr3R_14660001 RAL-705 1423 chr3R 14675791 14675802 chr3R 14675892 14675901 6 100 4.0 1.0 2.5 1.7 110 chr3R 14675791 intron Meltrin - chr3R 14675846 intron Meltrin - chr3R 14675901 intron Meltrin - chr3R_6_14675001 chr3R_14675001 RAL-705 1424 chr3R 14704383 14704409 chr3R 14704459 14704485 10 77 2.5 3.0 2.8 2.6 102 chr3R 14704383 intron kibra - chr3R 14704434 intron kibra - chr3R 14704485 intron kibra - chr3R_10_14700001 chr3R_14700001 RAL-705 1425 chr3R 14804784 14804795 chr3R 14804877 14804888 4 93 3.0 5.0 4.0 0.8 104 chr3R 14804784 3` UTR btsz - chr3R 14804836 3` UTR btsz - chr3R 14804888 3` UTR btsz - chr3R_4_14800001 chr3R_14800001 RAL-705 1426 chr3R 14812213 14812240 chr3R 14812305 14812332 8 92 3.0 7.0 5.0 1.3 119 chr3R 14812213 intron btsz - chr3R 14812272 intron btsz - chr3R 14812332 intron btsz - chr3R_8_14810001 chr3R_14810001 RAL-705 1427 chr3R 14838028 14838057 chr3R 14838118 14838147 10 90 1.0 3.0 2.0 3.3 119 chr3R 14838028 intron btsz - chr3R 14838088 intron btsz - chr3R 14838147 intron btsz - chr3R_10_14835001 chr3R_14835001 RAL-705 1428 chr3R 14898479 14898487 chr3R 14898599 14898607 4 120 2.0 2.5 2.2 1.2 128 chr3R 14898479 intergenic Nup93-2 -,CG3817 + chr3R 14898543 intergenic Nup93-2 -,CG3817 + chr3R 14898607 intergenic CG3817 +,Nup93-2 - chr3R_4_14895001 chr3R_14895001 RAL-705 1429 chr3R 14954809 14954831 chr3R 14955021 14955043 4 212 2.0 1.5 1.8 1.4 234 chr3R 14954809 intergenic not near genes chr3R 14954926 intergenic not near genes chr3R 14955043 intergenic not near genes chr3R_4_14950001 chr3R_14950001 RAL-705 1430 chr3R 15036549 15036575 chr3R 15036628 15036654 8 78 3.5 1.5 2.5 2.3 105 chr3R 15036549 intergenic not near genes chr3R 15036602 intergenic not near genes chr3R 15036654 intergenic not near genes chr3R_8_15035001 chr3R_15035001 RAL-705 1431 chr3R 15041434 15041457 chr3R 15045202 15045225 Doc 6 3768 1.0 3.5 2.2 1.9 3791 chr3R 15041434 intergenic not near genes chr3R 15043330 intergenic not near genes chr3R 15045225 intergenic not near genes chr3R_6_15040001 chr3R_15040001 RAL-705 1432 chr3R 15049468 15049488 chr3R 15049592 15049614 6 125 1.5 5.5 3.5 1.3 146 chr3R 15049468 intergenic not near genes chr3R 15049541 intergenic not near genes chr3R 15049614 intergenic not near genes chr3R_6_15045001 chr3R_15045001 RAL-705 1433 chr3R 15078342 15078375 chr3R 15078422 15078455 17 80 0.0 2.5 1.2 7.7 113 chr3R 15078342 intergenic CG6974 - chr3R 15078398 intergenic CG6974 - chr3R 15078455 intergenic CG6974 - chr3R_17_15075001 chr3R_15075001 RAL-705 1434 chr3R 15079807 15079832 chr3R 15080047 15080073 pogo 10 241 2.0 0.5 1.2 4.5 266 chr3R 15079807 3` UTR CG6966 - chr3R 15079940 3` UTR CG6966 - chr3R 15080073 3` UTR CG6966 - chr3R_10_15075001 chr3R_15075001 RAL-705 1435 chr3R 15102514 15102531 chr3R 15109769 15109786 412 7 7255 2.5 3.5 3.0 1.8 7272 chr3R 15102514 intron CG42788 - chr3R 15106150 intron CG42788 - chr3R 15109786 intron CG42788 - chr3R_7_15105001 chr3R_15105001 RAL-705 1436 chr3R 15143921 15143953 chr3R 15144104 15144136 6 183 0.5 1.0 0.8 3.3 215 chr3R 15143921 intron GlyS - chr3R 15144028 intron GlyS - chr3R 15144136 intron GlyS - chr3R_6_15140001 chr3R_15140001 RAL-705 1437 chr3R 15162540 15162559 chr3R 15167308 15167327 F-element 6 4767 3.5 0.0 1.8 2.1 4787 chr3R 15162540 intron Gyc88E + chr3R 15164934 intron Gyc88E + chr3R 15167327 intron Gyc88E + chr3R_6_15160001 chr3R_15160001 RAL-705 1438 chr3R 15416246 15416280 chr3R 15416326 15416359 8 80 1.0 1.5 1.2 3.6 113 chr3R 15416246 3` UTR Atx2 + chr3R 15416302 3` UTR Atx2 + chr3R 15416359 3` UTR Atx2 + chr3R_8_15415001 chr3R_15415001 RAL-705 1439 chr3R 15570143 15570171 chr3R 15570233 15570259 9 90 1.0 0.0 0.5 6.0 116 chr3R 15570143 intergenic not near genes chr3R 15570201 intergenic not near genes chr3R 15570259 intergenic not near genes chr3R_9_15570001 chr3R_15570001 RAL-705 1440 chr3R 15618734 15618762 chr3R 15626208 15626234 blood 7 7473 3.5 3.0 3.2 1.7 7500 chr3R 15618734 intergenic not near genes chr3R 15622484 intergenic not near genes chr3R 15626234 intergenic not near genes chr3R_7_15620001 chr3R_15620001 RAL-705 1441 chr3R 15631456 15631472 chr3R 15631985 15632001 4 529 2.5 5.0 3.8 0.8 545 chr3R 15631456 intergenic not near genes chr3R 15631728 intergenic not near genes chr3R 15632001 intergenic not near genes chr3R_4_15630001 chr3R_15630001 RAL-705 1442 chr3R 15667478 15667504 chr3R 15667564 15667590 9 86 1.5 2.0 1.8 3.2 112 chr3R 15667478 intron pxb + chr3R 15667534 intron pxb + chr3R 15667590 intron pxb + chr3R_9_15665001 chr3R_15665001 RAL-705 1443 chr3R 15749006 15749038 chr3R 15749086 15749125 5 84 4.0 0.0 2.0 1.7 119 chr3R 15749006 intergenic not near genes chr3R 15749066 intergenic not near genes chr3R 15749125 intergenic not near genes chr3R_5_15745001 chr3R_15745001 RAL-705 1444 chr3R 16073439 16073471 chr3R 16073543 16073575 4 104 2.5 0.0 1.2 1.8 136 chr3R 16073439 intron Mhcl - chr3R 16073507 intron Mhcl - chr3R 16073575 intron Mhcl - chr3R_4_16070001 chr3R_16070001 RAL-705 1445 chr3R 16128439 16128469 chr3R 16128522 16128554 6 84 4.5 2.5 3.5 1.3 115 chr3R 16128439 intron Sb + chr3R 16128496 intron Sb + chr3R 16128554 intron Sb + chr3R_6_16125001 chr3R_16125001 RAL-705 1446 chr3R 16246523 16246557 chr3R 16246599 16246633 5 76 0.0 2.0 1.0 2.5 110 chr3R 16246523 intron tara + chr3R 16246578 intron tara + chr3R 16246633 intron tara + chr3R_5_16245001 chr3R_16245001 RAL-705 1447 chr3R 16374305 16374323 chr3R 16374422 16374439 6 117 1.5 1.5 1.5 2.4 134 chr3R 16374305 intergenic ss - chr3R 16374372 intergenic ss - chr3R 16374439 3` UTR ss - chr3R_6_16370001 chr3R_16370001 RAL-705 1448 chr3R 16582910 16582919 chr3R 16582989 16582998 4 79 4.0 2.0 3.0 1.0 88 chr3R 16582910 intron Scp2 - chr3R 16582954 intron Scp2 - chr3R 16582998 intron Scp2 - chr3R_4_16580001 chr3R_16580001 RAL-705 1449 chr3R 16664186 16664207 chr3R 16664269 16664290 7 83 2.5 1.0 1.8 2.5 104 chr3R 16664186 intron Ubx - chr3R 16664238 intron Ubx - chr3R 16664290 intron Ubx - chr3R_7_16660001 chr3R_16660001 RAL-705 1450 chr3R 16725784 16725813 chr3R 16725865 16725894 11 81 2.5 3.0 2.8 2.9 110 chr3R 16725784 intron Ubx - chr3R 16725839 intron Ubx - chr3R 16725894 intron Ubx - chr3R_11_16725001 chr3R_16725001 RAL-705 1451 chr3R 16732147 16732174 chr3R 16732243 16732269 4 96 1.0 2.5 1.8 1.4 122 chr3R 16732147 intron Ubx - chr3R 16732208 intron Ubx - chr3R 16732269 intron Ubx - chr3R_4_16730001 chr3R_16730001 RAL-705 1452 chr3R 16756328 16756347 chr3R 16762519 16762538 diver 7 6191 2.5 1.5 2.0 2.3 6210 chr3R 16756328 intron bxd - chr3R 16759433 intron bxd - chr3R 16762538 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-705 1453 chr3R 16771613 16771642 chr3R 16771689 16771718 7 76 2.5 1.5 2.0 2.3 105 chr3R 16771613 intron bxd - chr3R 16771666 intron bxd - chr3R 16771718 intron bxd - chr3R_7_16770001 chr3R_16770001 RAL-705 1454 chr3R 16860334 16860364 chr3R 16860412 16860442 8 78 0.5 0.5 0.5 5.3 108 chr3R 16860334 intron iab-8 - chr3R 16860388 intron iab-8 - chr3R 16860442 intron iab-8 - chr3R_8_16860001 chr3R_16860001 RAL-705 1455 chr3R 16874846 16874873 chr3R 16878593 16878620 9 3747 9.0 20.0 14.5 0.6 3774 chr3R 16874846 intron iab-8 - chr3R 16876733 intron iab-8 - chr3R 16878620 intron iab-8 - chr3R_9_16875001 chr3R_16875001 RAL-705 1456 chr3R 17067508 17067536 chr3R 17067591 17067619 5 82 3.0 0.0 1.5 2.0 111 chr3R 17067508 intron Dad + chr3R 17067564 intron Dad + chr3R 17067619 intron Dad + chr3R_5_17065001 chr3R_17065001 RAL-705 1457 chr3R 17184587 17184755 chr3R 17184685 17184831 9 86 0.0 2.0 1.0 4.5 244 chr3R 17184587 intron Mur89F - chr3R 17184709 intron Mur89F - chr3R 17184831 intron Mur89F - chr3R_9_17180001 chr3R_17180001 RAL-705 1458 chr3R 17214026 17214053 chr3R 17214101 17214129 5 76 1.0 1.5 1.2 2.3 103 chr3R 17214026 intergenic not near genes chr3R 17214078 intergenic not near genes chr3R 17214129 intergenic not near genes chr3R_5_17210001 chr3R_17210001 RAL-705 1459 chr3R 17268679 17268700 chr3R 17268801 17268822 6 122 3.0 3.0 3.0 1.5 143 chr3R 17268679 intergenic not near genes chr3R 17268750 intergenic not near genes chr3R 17268822 intergenic not near genes chr3R_6_17265001 chr3R_17265001 RAL-705 1460 chr3R 17294671 17294699 chr3R 17295099 17295127 BS 7 428 3.5 2.5 3.0 1.8 456 chr3R 17294671 intergenic not near genes chr3R 17294899 intergenic not near genes chr3R 17295127 intergenic not near genes chr3R_7_17290001 chr3R_17290001 RAL-705 1461 chr3R 17461201 17461231 chr3R 17461283 17461313 6 82 2.0 1.0 1.5 2.4 112 chr3R 17461201 intergenic not near genes chr3R 17461257 intergenic not near genes chr3R 17461313 intergenic not near genes chr3R_6_17460001 chr3R_17460001 RAL-705 1462 chr3R 17522212 17522230 chr3R 17522305 17522323 5 93 2.5 0.0 1.2 2.3 111 chr3R 17522212 intergenic not near genes chr3R 17522268 intergenic not near genes chr3R 17522323 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-705 1463 chr3R 17554356 17554374 chr3R 17554633 17554651 11 277 7.5 2.0 4.8 1.9 295 chr3R 17554356 intergenic not near genes chr3R 17554504 intergenic not near genes chr3R 17554651 intergenic not near genes chr3R_11_17550001 chr3R_17550001 RAL-705 1464 chr3R 17591287 17591320 chr3R 17591723 17591754 F-element 4 435 2.0 0.5 1.2 1.8 467 chr3R 17591287 intergenic not near genes chr3R 17591520 intergenic not near genes chr3R 17591754 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-705 1465 chr3R 17609207 17609236 chr3R 17609295 17609324 7 87 2.0 1.5 1.8 2.5 117 chr3R 17609207 intergenic CG14329 + chr3R 17609266 intergenic CG14329 + chr3R 17609324 intergenic CG14329 + chr3R_7_17605001 chr3R_17605001 RAL-705 1466 chr3R 17739184 17739212 chr3R 17739265 17739294 4 82 3.5 1.5 2.5 1.1 110 chr3R 17739184 intron TyrRII + chr3R 17739239 intron TyrRII + chr3R 17739294 intron TyrRII + chr3R_4_17735001 chr3R_17735001 RAL-705 1467 chr3R 17899092 17899107 chr3R 17899170 17899185 6 78 2.5 2.0 2.2 1.9 93 chr3R 17899092 intron Rim - chr3R 17899138 intron Rim - chr3R 17899185 intron Rim - chr3R_6_17895001 chr3R_17895001 RAL-705 1468 chr3R 17900190 17900222 chr3R 17900294 17900326 7 104 0.0 3.0 1.5 2.8 136 chr3R 17900190 intron Rim - chr3R 17900258 intron Rim - chr3R 17900326 intron Rim - chr3R_7_17900001 chr3R_17900001 RAL-705 1469 chr3R 17925850 17925889 chr3R 17927317 17927356 hobo 7 1467 3.5 5.5 4.5 1.3 1506 chr3R 17925850 intron cpo + chr3R 17926603 intron cpo + chr3R 17927356 intron cpo + chr3R_7_17925001 chr3R_17925001 RAL-705 1470 chr3R 18060322 18060343 chr3R 18060416 18060433 6 93 0.5 5.5 3.0 1.5 111 chr3R 18060322 intergenic not near genes chr3R 18060378 intergenic not near genes chr3R 18060433 intergenic not near genes chr3R_6_18060001 chr3R_18060001 RAL-705 1471 chr3R 18078156 18078179 chr3R 18078235 18078258 7 79 2.5 0.0 1.2 3.2 102 chr3R 18078156 intergenic not near genes chr3R 18078207 intergenic not near genes chr3R 18078258 intergenic not near genes chr3R_7_18075001 chr3R_18075001 RAL-705 1472 chr3R 18089076 18089107 chr3R 18089161 18089192 8 85 2.5 1.5 2.0 2.7 116 chr3R 18089076 intergenic not near genes chr3R 18089134 intergenic not near genes chr3R 18089192 intergenic not near genes chr3R_8_18085001 chr3R_18085001 RAL-705 1473 chr3R 18143561 18143589 chr3R 18143649 18143674 4 88 3.0 2.5 2.8 1.1 113 chr3R 18143561 intergenic not near genes chr3R 18143618 intergenic not near genes chr3R 18143674 intergenic not near genes chr3R_4_18140001 chr3R_18140001 RAL-705 1474 chr3R 18501589 18501629 chr3R 18501670 18501710 14 81 1.0 1.5 1.2 6.4 121 chr3R 18501589 intron fru - chr3R 18501650 intron fru - chr3R 18501710 intron fru - chr3R_14_18500001 chr3R_18500001 RAL-705 1475 chr3R 18528383 18528395 chr3R 18528470 18528481 4 87 1.5 4.0 2.8 1.1 98 chr3R 18528383 intron fru - chr3R 18528432 intron fru - chr3R 18528481 intron fru - chr3R_4_18525001 chr3R_18525001 RAL-705 1476 chr3R 18606503 18606530 chr3R 18610735 18610762 F-element 6 4232 2.5 1.5 2.0 2.0 4259 chr3R 18606503 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610762 intron,intron qin +,CG14304 - chr3R_6_18605001 chr3R_18605001 RAL-705 1477 chr3R 18781695 18781712 chr3R 18781771 18781788 6 76 4.0 2.5 3.2 1.4 93 chr3R 18781695 intron CG7720 - chr3R 18781742 intron CG7720 - chr3R 18781788 intron CG7720 - chr3R_6_18780001 chr3R_18780001 RAL-705 1478 chr3R 18808474 18808505 chr3R 18808551 18808582 5 77 1.0 1.5 1.2 2.3 108 chr3R 18808474 intron CG18208 - chr3R 18808528 intron CG18208 - chr3R 18808582 intron CG18208 - chr3R_5_18805001 chr3R_18805001 RAL-705 1479 chr3R 18812075 18812107 chr3R 18812153 18812185 8 78 2.5 3.0 2.8 2.1 110 chr3R 18812075 intron CG18208 - chr3R 18812130 intron CG18208 - chr3R 18812185 intron CG18208 - chr3R_8_18810001 chr3R_18810001 RAL-705 1480 chr3R 18816891 18816903 chr3R 18817426 18817438 7 535 2.0 3.0 2.5 2.0 547 chr3R 18816891 intron CG18208 - chr3R 18817164 intron CG18208 - chr3R 18817438 intron CG18208 - chr3R_7_18815001 chr3R_18815001 RAL-705 1481 chr3R 18862600 18862610 chr3R 18862685 18862695 4 85 0.0 2.5 1.2 1.8 95 chr3R 18862600 intergenic not near genes chr3R 18862648 intergenic not near genes chr3R 18862695 intergenic not near genes chr3R_4_18860001 chr3R_18860001 RAL-705 1482 chr3R 18888830 18888863 chr3R 18889165 18889198 13 335 3.0 2.5 2.8 3.4 368 chr3R 18888830 intergenic not near genes chr3R 18889014 intergenic not near genes chr3R 18889198 intergenic not near genes chr3R_13_18885001 chr3R_18885001 RAL-705 1483 chr3R 18891262 18891288 chr3R 18891388 18891414 9 125 5.0 4.5 4.8 1.6 152 chr3R 18891262 intergenic not near genes chr3R 18891338 intergenic not near genes chr3R 18891414 intergenic not near genes chr3R_9_18890001 chr3R_18890001 RAL-705 1484 chr3R 19136406 19136423 chr3R 19139792 19139809 Bari1 5 3386 37.0 16.5 26.8 0.2 3403 chr3R 19136406 exon Cyp12a4 + chr3R 19138108 intergenic not near genes chr3R 19139809 3` UTR Ppcs - chr3R_5_19135001 chr3R_19135001 RAL-705 1485 chr3R 19140268 19140301 chr3R 19140716 19140749 12 448 2.0 3.0 2.5 3.4 481 chr3R 19140268 3` UTR Ppcs - chr3R 19140508 3` UTR Ppcs - chr3R 19140749 3` UTR Ppcs - chr3R_12_19140001 chr3R_19140001 RAL-705 1486 chr3R 19204270 19204301 chr3R 19204478 19204510 17 209 4.5 5.5 5.0 2.8 240 chr3R 19204270 intergenic not near genes chr3R 19204390 intergenic not near genes chr3R 19204510 intergenic not near genes chr3R_17_19200001 chr3R_19200001 RAL-705 1487 chr3R 19248876 19248891 chr3R 19248956 19248971 4 80 2.5 0.0 1.2 1.8 95 chr3R 19248876 intergenic not near genes chr3R 19248924 intergenic not near genes chr3R 19248971 intergenic not near genes chr3R_4_19245001 chr3R_19245001 RAL-705 1488 chr3R 19396361 19396391 chr3R 19396447 19396477 7 86 1.0 2.0 1.5 2.8 116 chr3R 19396361 intron Ino80 - chr3R 19396419 intron Ino80 - chr3R 19396477 intron Ino80 - chr3R_7_19395001 chr3R_19395001 RAL-705 1489 chr3R 19414597 19414616 chr3R 19414674 19414693 6 77 1.5 1.0 1.2 2.7 96 chr3R 19414597 intron CG31221 + chr3R 19414645 intron CG31221 + chr3R 19414693 intron CG31221 + chr3R_6_19410001 chr3R_19410001 RAL-705 1490 chr3R 19517932 19517956 chr3R 19518093 19518117 8 161 3.0 3.0 3.0 2.0 185 chr3R 19517932 intron Dys + chr3R 19518024 intron Dys + chr3R 19518117 intron Dys + chr3R_8_19515001 chr3R_19515001 RAL-705 1491 chr3R 19604683 19604710 chr3R 19604816 19604843 12 133 1.5 2.5 2.0 4.0 160 chr3R 19604683 exon CG7342 + chr3R 19604763 intron CG7342 + chr3R 19604843 intron CG7342 + chr3R_12_19600001 chr3R_19600001 RAL-705 1492 chr3R 19611992 19612014 chr3R 19616025 19616047 7 4033 12.5 14.5 13.5 0.5 4055 chr3R 19611992 exon CG17752 + chr3R 19614020 exon CG16727 + chr3R 19616047 3` UTR CG6231 - chr3R_7_19610001 chr3R_19610001 RAL-705 1493 chr3R 19668001 19668016 chr3R 19668084 19668099 4 83 0.0 2.5 1.2 1.8 98 chr3R 19668001 intron CG7432 + chr3R 19668050 intron CG7432 + chr3R 19668099 intron CG7432 + chr3R_4_19665001 chr3R_19665001 RAL-705 1494 chr3R 19681603 19681631 chr3R 19681694 19681721 9 91 1.0 0.5 0.8 5.0 118 chr3R 19681603 intron Naam + chr3R 19681662 intron Naam + chr3R 19681721 intron Naam + chr3R_9_19680001 chr3R_19680001 RAL-705 1495 chr3R 19683252 19683272 chr3R 19683404 19683425 8 152 2.5 1.5 2.0 2.7 173 chr3R 19683252 intron Naam + chr3R 19683338 intron Naam + chr3R 19683425 intron Naam + chr3R_8_19680001 chr3R_19680001 RAL-705 1496 chr3R 19702322 19702351 chr3R 19702404 19702433 5 81 1.0 1.5 1.2 2.3 111 chr3R 19702322 intergenic not near genes chr3R 19702378 intergenic not near genes chr3R 19702433 intergenic not near genes chr3R_5_19700001 chr3R_19700001 RAL-705 1497 chr3R 19839528 19839558 chr3R 19839760 19839789 8 232 3.5 2.5 3.0 2.0 261 chr3R 19839528 intergenic not near genes chr3R 19839658 intergenic not near genes chr3R 19839789 intergenic not near genes chr3R_8_19835001 chr3R_19835001 RAL-705 1498 chr3R 20008826 20008850 chr3R 20008906 20008931 7 81 3.5 2.0 2.8 1.8 105 chr3R 20008826 intergenic MED25 +,Hs6st - chr3R 20008878 intergenic MED25 +,Hs6st - chr3R 20008931 intergenic MED25 +,Hs6st - chr3R_7_20005001 chr3R_20005001 RAL-705 1499 chr3R 20066115 20066139 chr3R 20066305 20066329 12 190 2.0 2.0 2.0 4.0 214 chr3R 20066115 intergenic not near genes chr3R 20066222 intergenic not near genes chr3R 20066329 intergenic not near genes chr3R_12_20065001 chr3R_20065001 RAL-705 1500 chr3R 20066561 20066584 chr3R 20066797 20066820 5 236 0.5 2.5 1.5 2.0 259 chr3R 20066561 intergenic not near genes chr3R 20066690 intergenic not near genes chr3R 20066820 intergenic not near genes chr3R_5_20065001 chr3R_20065001 RAL-705 1501 chr3R 20077047 20077062 chr3R 20077133 20077148 5 85 2.5 1.0 1.8 1.8 101 chr3R 20077047 intergenic not near genes chr3R 20077098 intergenic not near genes chr3R 20077148 intergenic not near genes chr3R_5_20075001 chr3R_20075001 RAL-705 1502 chr3R 20109535 20109565 chr3R 20114741 20114771 copia 5 5206 3.0 2.5 2.8 1.3 5236 chr3R 20109535 intergenic not near genes chr3R 20112153 intergenic not near genes chr3R 20114771 intergenic CG10887 + chr3R_5_20110001 chr3R_20110001 RAL-705 1503 chr3R 20124569 20124589 chr3R 20124656 20124676 5 87 3.5 2.5 3.0 1.2 107 chr3R 20124569 intergenic not near genes chr3R 20124622 intergenic not near genes chr3R 20124676 intergenic not near genes chr3R_5_20120001 chr3R_20120001 RAL-705 1504 chr3R 20156688 20156720 chr3R 20165858 20165889 roo 6 9169 2.5 5.0 3.8 1.2 9201 chr3R 20156688 intergenic not near genes chr3R 20161288 intergenic not near genes chr3R 20165889 intergenic not near genes chr3R_6_20160001 chr3R_20160001 RAL-705 1505 chr3R 20190568 20190587 chr3R 20190657 20190672 4 88 1.5 3.0 2.2 1.2 104 chr3R 20190568 intergenic not near genes chr3R 20190620 intergenic not near genes chr3R 20190672 intergenic not near genes chr3R_4_20190001 chr3R_20190001 RAL-705 1506 chr3R 20205564 20205590 chr3R 20205686 20205712 4 122 1.0 1.0 1.0 2.0 148 chr3R 20205564 intron Nlg4 + chr3R 20205638 intron Nlg4 + chr3R 20205712 intron Nlg4 + chr3R_4_20205001 chr3R_20205001 RAL-705 1507 chr3R 20252225 20252242 chr3R 20252303 20252320 6 78 0.0 0.0 0.0 6.0 95 chr3R 20252225 intergenic not near genes chr3R 20252272 intergenic cic + chr3R 20252320 intergenic cic + chr3R_6_20250001 chr3R_20250001 RAL-705 1508 chr3R 20256844 20256869 chr3R 20256922 20256947 5 78 0.0 2.5 1.2 2.3 103 chr3R 20256844 intron cic + chr3R 20256896 intron cic + chr3R 20256947 intron cic + chr3R_5_20255001 chr3R_20255001 RAL-705 1509 chr3R 20266516 20266543 chr3R 20272986 20273014 Burdock 11 6471 2.5 2.0 2.2 3.4 6498 chr3R 20266516 intron cic + chr3R 20269765 intron cic + chr3R 20273014 intron cic + chr3R_11_20265001 chr3R_20265001 RAL-705 1510 chr3R 20282280 20282309 chr3R 20282356 20282383 6 76 0.5 3.0 1.8 2.1 103 chr3R 20282280 intron cic + chr3R 20282332 intron cic + chr3R 20282383 intron cic + chr3R_6_20280001 chr3R_20280001 RAL-705 1511 chr3R 20308194 20308206 chr3R 20308282 20308292 4 88 4.0 0.0 2.0 1.3 98 chr3R 20308194 intergenic not near genes chr3R 20308243 intergenic not near genes chr3R 20308292 intergenic not near genes chr3R_4_20305001 chr3R_20305001 RAL-705 1512 chr3R 20312859 20312875 chr3R 20312945 20312961 5 86 1.5 0.5 1.0 2.5 102 chr3R 20312859 intron CG42668 + chr3R 20312910 intron CG42668 + chr3R 20312961 intron CG42668 + chr3R_5_20310001 chr3R_20310001 RAL-705 1513 chr3R 20330997 20331030 chr3R 20331483 20331516 roo 10 486 0.5 3.0 1.8 3.6 519 chr3R 20330997 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331516 intergenic not near genes chr3R_10_20330001 chr3R_20330001 RAL-705 1514 chr3R 20467077 20467107 chr3R 20467152 20467183 9 74 3.0 1.5 2.2 2.8 106 chr3R 20467077 intron Gfrl - chr3R 20467130 intron Gfrl - chr3R 20467183 intron Gfrl - chr3R_9_20465001 chr3R_20465001 RAL-705 1515 chr3R 20684221 20684240 chr3R 20684305 20684324 5 84 2.0 3.0 2.5 1.4 103 chr3R 20684221 intergenic not near genes chr3R 20684272 intergenic not near genes chr3R 20684324 intergenic not near genes chr3R_5_20680001 chr3R_20680001 RAL-705 1516 chr3R 20703485 20703515 chr3R 20703879 20703907 6 394 0.5 2.0 1.2 2.7 422 chr3R 20703485 intron Oamb - chr3R 20703696 intron Oamb - chr3R 20703907 intron Oamb - chr3R_6_20700001 chr3R_20700001 RAL-705 1517 chr3R 20722851 20722886 chr3R 20722978 20723013 14 126 3.0 2.5 2.8 3.7 162 chr3R 20722851 intergenic not near genes chr3R 20722932 intergenic not near genes chr3R 20723013 intergenic not near genes chr3R_14_20720001 chr3R_20720001 RAL-705 1518 chr3R 20730937 20731056 chr3R 20731037 20731144 8 94 0.0 0.0 0.0 8.0 207 chr3R 20730937 intergenic not near genes chr3R 20731040 intergenic not near genes chr3R 20731144 intergenic CG31205 + chr3R_8_20730001 chr3R_20730001 RAL-705 1519 chr3R 20733760 20733795 chr3R 20733852 20733884 10 91 3.0 0.5 1.8 3.6 124 chr3R 20733760 intergenic not near genes chr3R 20733822 intergenic not near genes chr3R 20733884 intergenic not near genes chr3R_10_20730001 chr3R_20730001 RAL-705 1520 chr3R 20764410 20764430 chr3R 20764505 20764526 4 96 5.5 4.0 4.8 0.7 116 chr3R 20764410 intron Syp + chr3R 20764468 intron Syp + chr3R 20764526 intron Syp + chr3R_4_20760001 chr3R_20760001 RAL-705 1521 chr3R 20767509 20767539 chr3R 20767603 20767635 5 95 0.5 1.5 1.0 2.5 126 chr3R 20767509 intron Syp + chr3R 20767572 intron Syp + chr3R 20767635 intron Syp + chr3R_5_20765001 chr3R_20765001 RAL-705 1522 chr3R 20771707 20771722 chr3R 20771788 20771801 5 80 0.0 1.0 0.5 3.3 94 chr3R 20771707 intron,intron Syp +,Takl1 - chr3R 20771754 intron,intron Syp +,Takl1 - chr3R 20771801 intron,exon Syp +,Takl1 - chr3R_5_20770001 chr3R_20770001 RAL-705 1523 chr3R 20787440 20787456 chr3R 20787531 20787547 7 91 2.5 1.0 1.8 2.5 107 chr3R 20787440 intron Syp + chr3R 20787494 intron Syp + chr3R 20787547 intron Syp + chr3R_7_20785001 chr3R_20785001 RAL-705 1524 chr3R 20867767 20867802 chr3R 20867854 20867890 13 88 2.0 3.5 2.8 3.4 123 chr3R 20867767 intergenic not near genes chr3R 20867828 intergenic not near genes chr3R 20867890 intergenic not near genes chr3R_13_20865001 chr3R_20865001 RAL-705 1525 chr3R 20870255 20870283 chr3R 20870340 20870368 10 84 3.0 2.0 2.5 2.9 113 chr3R 20870255 intergenic not near genes chr3R 20870312 intergenic not near genes chr3R 20870368 intergenic not near genes chr3R_10_20870001 chr3R_20870001 RAL-705 1526 chr3R 20938921 20938940 chr3R 20939008 20939027 8 87 1.5 4.0 2.8 2.1 106 chr3R 20938921 intron CG31191 - chr3R 20938974 intron CG31191 - chr3R 20939027 intron CG31191 - chr3R_8_20935001 chr3R_20935001 RAL-705 1527 chr3R 21020399 21020419 chr3R 21020475 21020495 9 76 4.5 2.5 3.5 2.0 96 chr3R 21020399 3` UTR Rlip + chr3R 21020447 3` UTR Rlip + chr3R 21020495 3` UTR Rlip + chr3R_9_21020001 chr3R_21020001 RAL-705 1528 chr3R 21041106 21041126 chr3R 21041259 21041279 8 153 5.0 1.0 3.0 2.0 173 chr3R 21041106 exon Dhc93AB - chr3R 21041192 intron Dhc93AB - chr3R 21041279 intron Dhc93AB - chr3R_8_21040001 chr3R_21040001 RAL-705 1529 chr3R 21074813 21074830 chr3R 21075033 21075051 4 221 0.0 4.0 2.0 1.3 238 chr3R 21074813 intron dmrt93B + chr3R 21074932 intron dmrt93B + chr3R 21075051 intron dmrt93B + chr3R_4_21070001 chr3R_21070001 RAL-705 1530 chr3R 21141675 21141700 chr3R 21150154 21150181 Tirant 9 8480 3.0 1.5 2.2 2.8 8506 chr3R 21141675 intron SNF4Agamma + chr3R 21145928 intron SNF4Agamma + chr3R 21150181 intron SNF4Agamma + chr3R_9_21145001 chr3R_21145001 RAL-705 1531 chr3R 21236475 21236503 chr3R 21236552 21236579 11 76 1.0 1.5 1.2 5.0 104 chr3R 21236475 intron e - chr3R 21236527 intron e - chr3R 21236579 intron e - chr3R_11_21235001 chr3R_21235001 RAL-705 1532 chr3R 21383272 21383294 chr3R 21383352 21383374 7 80 0.0 0.5 0.2 5.8 102 chr3R 21383272 intergenic not near genes chr3R 21383323 intergenic not near genes chr3R 21383374 intergenic not near genes chr3R_7_21380001 chr3R_21380001 RAL-705 1533 chr3R 21385693 21385963 chr3R 21385774 21386040 13 78 2.0 0.0 1.0 6.5 347 chr3R 21385693 intergenic not near genes chr3R 21385866 intergenic not near genes chr3R 21386040 intergenic not near genes chr3R_13_21385001 chr3R_21385001 RAL-705 1534 chr3R 21408856 21408876 chr3R 21408935 21408955 8 79 2.0 3.0 2.5 2.3 99 chr3R 21408856 intergenic CheB93b + chr3R 21408906 intergenic CheB93b + chr3R 21408955 intergenic CheB93b + chr3R_8_21405001 chr3R_21405001 RAL-705 1535 chr3R 21491176 21491196 chr3R 21491299 21491319 8 123 5.0 2.0 3.5 1.8 143 chr3R 21491176 intergenic not near genes chr3R 21491248 intergenic not near genes chr3R 21491319 intergenic not near genes chr3R_8_21490001 chr3R_21490001 RAL-705 1536 chr3R 21518253 21518270 chr3R 21518337 21518354 5 84 0.0 3.5 1.8 1.8 101 chr3R 21518253 intergenic not near genes chr3R 21518304 intergenic not near genes chr3R 21518354 intergenic not near genes chr3R_5_21515001 chr3R_21515001 RAL-705 1537 chr3R 21519985 21520144 chr3R 21520086 21520238 12 99 1.5 1.5 1.5 4.8 253 chr3R 21519985 intergenic not near genes chr3R 21520112 intergenic not near genes chr3R 21520238 intergenic not near genes chr3R_12_21520001 chr3R_21520001 RAL-705 1538 chr3R 21560072 21560100 chr3R 21560163 21560191 8 91 3.5 2.5 3.0 2.0 119 chr3R 21560072 intergenic not near genes chr3R 21560132 intergenic not near genes chr3R 21560191 intergenic not near genes chr3R_8_21560001 chr3R_21560001 RAL-705 1539 chr3R 21582999 21583016 chr3R 21583099 21583117 5 101 1.0 2.5 1.8 1.8 118 chr3R 21582999 intron InR - chr3R 21583058 intron InR - chr3R 21583117 intron InR - chr3R_5_21580001 chr3R_21580001 RAL-705 1540 chr3R 21586419 21586449 chr3R 21586501 21586533 12 83 2.5 2.0 2.2 3.8 114 chr3R 21586419 intron InR - chr3R 21586476 intron InR - chr3R 21586533 intron InR - chr3R_12_21585001 chr3R_21585001 RAL-705 1541 chr3R 21600252 21600274 chr3R 21600330 21600352 9 78 0.0 3.5 1.8 3.2 100 chr3R 21600252 intron InR - chr3R 21600302 intron InR - chr3R 21600352 intron InR - chr3R_9_21600001 chr3R_21600001 RAL-705 1542 chr3R 21609003 21609040 chr3R 21611637 21611673 NOF 9 2633 2.0 3.5 2.8 2.4 2670 chr3R 21609003 intron InR - chr3R 21610338 intron InR - chr3R 21611673 intron InR - chr3R_9_21610001 chr3R_21610001 RAL-705 1543 chr3R 21761121 21761154 chr3R 21768512 21768545 mdg1 11 7390 1.5 2.0 1.8 3.9 7424 chr3R 21761121 exon CG42335 + chr3R 21764833 intron CG42335 + chr3R 21768545 exon CG42335 + chr3R_11_21760001 chr3R_21760001 RAL-705 1544 chr3R 8339240 8339246 chr3R 21907534 21907534 7 13568289 14.0 21.5 17.8 0.4 13568294 chr3R 8339240 intergenic not near genes chr3R 15123387 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 RAL-705 1545 chr3R 17389054 17389054 chr3R 21907534 21907534 5 4518480 3.5 21.5 12.5 0.4 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_5_19645001 chr3R_19645001 RAL-705 1546 chr3R 21907534 21907534 chr3R 28831799 28831805 35 6924268 20.5 10.0 15.2 2.2 6924271 chr3R 21907534 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831805 intron WASp - chr3R_35_25365001 chr3R_25365001 RAL-705 1547 chr3R 8339246 8339247 chr3R 21907535 21907535 10 13568288 14.0 21.5 17.8 0.5 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_10_15120001 chr3R_15120001 RAL-705 1548 chr3R 9620954 9620956 chr3R 21907535 21907535 9 12286579 5.0 21.5 13.2 0.6 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_9_15760001 chr3R_15760001 RAL-705 1549 chr3R 17389054 17389054 chr3R 21907535 21907535 5 4518481 3.5 21.5 12.5 0.4 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_5_19645001 chr3R_19645001 RAL-705 1550 chr3R 21907535 21907535 chr3R 28831796 28831803 103 6924266 19.5 10.0 14.8 6.5 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_103_25365001 chr3R_25365001 RAL-705 1551 chr3R 9620956 9620956 chr3R 21907536 21907536 5 12286580 5.0 21.5 13.2 0.4 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-705 1552 chr3R 21907536 21907536 chr3R 28831801 28831802 91 6924266 19.0 9.5 14.2 6.0 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_91_25365001 chr3R_25365001 RAL-705 1553 chr3R 21938061 21938078 chr3R 21938219 21938236 5 158 0.5 1.0 0.8 2.8 175 chr3R 21938061 intergenic not near genes chr3R 21938148 intergenic not near genes chr3R 21938236 intergenic not near genes chr3R_5_21935001 chr3R_21935001 RAL-705 1554 chr3R 21996836 21996856 chr3R 21997266 21997287 9 430 2.5 3.0 2.8 2.4 451 chr3R 21996836 intron Eip93F + chr3R 21997062 intron Eip93F + chr3R 21997287 intron Eip93F + chr3R_9_21995001 chr3R_21995001 RAL-705 1555 chr3R 22234690 22234715 chr3R 22236009 22236034 pogo 9 1319 2.0 0.5 1.2 4.1 1344 chr3R 22234690 intron SKIP + chr3R 22235362 intron SKIP + chr3R 22236034 intron SKIP + chr3R_9_22235001 chr3R_22235001 RAL-705 1556 chr3R 22239493 22239501 chr3R 22248552 22248561 roo 5 9060 7.0 0.0 3.5 1.1 9068 chr3R 22239493 intron SKIP + chr3R 22244027 intron SKIP + chr3R 22248561 intron SKIP + chr3R_5_22240001 chr3R_22240001 RAL-705 1557 chr3R 22348507 22348527 chr3R 22349251 22349271 4 744 2.0 0.0 1.0 2.0 764 chr3R 22348507 intergenic not near genes chr3R 22348889 intergenic not near genes chr3R 22349271 intergenic not near genes chr3R_4_22345001 chr3R_22345001 RAL-705 1558 chr3R 22434411 22434423 chr3R 22434555 22434567 4 144 2.0 3.5 2.8 1.1 156 chr3R 22434411 intron CG13847 - chr3R 22434489 intron CG13847 - chr3R 22434567 intron CG13847 - chr3R_4_22430001 chr3R_22430001 RAL-705 1559 chr3R 22450541 22450556 chr3R 22453181 22453188 NOF 6 2639 4.0 2.0 3.0 1.5 2647 chr3R 22450541 intron CG34376 + chr3R 22451864 intron CG34376 + chr3R 22453188 intron CG34376 + chr3R_6_22450001 chr3R_22450001 RAL-705 1560 chr3R 22769093 22769120 chr3R 22769170 22769197 10 76 4.5 3.5 4.0 2.0 104 chr3R 22769093 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769145 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769197 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_10_22765001 chr3R_22765001 RAL-705 1561 chr3R 22794521 22794550 chr3R 22794596 22794626 5 76 1.5 3.5 2.5 1.4 105 chr3R 22794521 intergenic CG7029 + chr3R 22794574 intergenic not near genes chr3R 22794626 intergenic not near genes chr3R_5_22790001 chr3R_22790001 RAL-705 1562 chr3R 22881191 22881214 chr3R 22884897 22884920 Doc 4 3706 1.0 1.0 1.0 2.0 3729 chr3R 22881191 intergenic not near genes chr3R 22883056 intergenic not near genes chr3R 22884920 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-705 1563 chr3R 22913216 22913242 chr3R 22913289 22913318 14 76 2.5 1.5 2.0 4.7 102 chr3R 22913216 intron klg + chr3R 22913267 intron klg + chr3R 22913318 intron klg + chr3R_14_22910001 chr3R_22910001 RAL-705 1564 chr3R 23073654 23073675 chr3R 23073743 23073764 4 89 3.0 2.5 2.8 1.1 110 chr3R 23073654 intron CG13830 - chr3R 23073709 intron CG13830 - chr3R 23073764 intron CG13830 - chr3R_4_23070001 chr3R_23070001 RAL-705 1565 chr3R 23101389 23101411 chr3R 23101481 23101501 7 91 1.0 2.5 1.8 2.5 112 chr3R 23101389 intron CG13830 - chr3R 23101445 intron CG13830 - chr3R 23101501 intron CG13830 - chr3R_7_23100001 chr3R_23100001 RAL-705 1566 chr3R 23223206 23223223 chr3R 23223352 23223371 6 146 18.0 17.0 17.5 0.3 165 chr3R 23223206 intron cnc - chr3R 23223288 intron cnc - chr3R 23223371 intron cnc - chr3R_6_23220001 chr3R_23220001 RAL-705 1567 chr3R 23291248 23291279 chr3R 23291334 23291365 9 85 2.5 2.0 2.2 2.8 117 chr3R 23291248 3` UTR pnt - chr3R 23291306 3` UTR pnt - chr3R 23291365 exon pnt - chr3R_9_23290001 chr3R_23290001 RAL-705 1568 chr3R 23311688 23311705 chr3R 23311782 23311799 5 94 1.5 2.5 2.0 1.7 111 chr3R 23311688 intron pnt - chr3R 23311744 intron pnt - chr3R 23311799 intron pnt - chr3R_5_23310001 chr3R_23310001 RAL-705 1569 chr3R 23453681 23453710 chr3R 23453760 23453788 12 79 2.5 1.5 2.0 4.0 107 chr3R 23453681 intron CG4374 - chr3R 23453734 intron CG4374 - chr3R 23453788 intron CG4374 - chr3R_12_23450001 chr3R_23450001 RAL-705 1570 chr3R 23558401 23558422 chr3R 23560182 23560203 Bari1 6 1781 1.5 3.5 2.5 1.7 1802 chr3R 23558401 intron beat-IV + chr3R 23559302 intron beat-IV + chr3R 23560203 intron beat-IV + chr3R_6_23555001 chr3R_23555001 RAL-705 1571 chr3R 23564442 23564472 chr3R 23564585 23564616 4 144 1.5 1.0 1.2 1.8 174 chr3R 23564442 intron beat-IV + chr3R 23564529 intron beat-IV + chr3R 23564616 intron beat-IV + chr3R_4_23560001 chr3R_23560001 RAL-705 1572 chr3R 23623984 23624009 chr3R 23624489 23624515 8 505 1.0 3.5 2.2 2.5 531 chr3R 23623984 intron CG31145 - chr3R 23624250 intron CG31145 - chr3R 23624515 intron CG31145 - chr3R_8_23620001 chr3R_23620001 RAL-705 1573 chr3R 23684715 23684724 chr3R 23685197 23685208 roo 4 484 1.5 4.0 2.8 1.1 493 chr3R 23684715 intron CG18754 + chr3R 23684962 intron CG18754 + chr3R 23685208 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-705 1574 chr3R 23724891 23724914 chr3R 23724974 23724998 8 84 1.0 0.0 0.5 5.3 107 chr3R 23724891 intron CG10365 + chr3R 23724944 intron CG10365 + chr3R 23724998 intron CG10365 + chr3R_8_23720001 chr3R_23720001 RAL-705 1575 chr3R 23888081 23888114 chr3R 23888167 23888200 10 86 1.5 0.0 0.8 5.6 119 chr3R 23888081 intron Pli - chr3R 23888140 intron Pli - chr3R 23888200 intron Pli - chr3R_10_23885001 chr3R_23885001 RAL-705 1576 chr3R 23944914 23944935 chr3R 23944999 23945020 9 85 1.5 1.5 1.5 3.6 106 chr3R 23944914 intron CG12268 - chr3R 23944967 intron CG12268 - chr3R 23945020 exon CG12268 - chr3R_9_23940001 chr3R_23940001 RAL-705 1577 chr3R 24025576 24025595 chr3R 24025655 24025674 7 79 1.0 2.5 1.8 2.5 98 chr3R 24025576 intron KrT95D - chr3R 24025625 intron KrT95D - chr3R 24025674 intron KrT95D - chr3R_7_24025001 chr3R_24025001 RAL-705 1578 chr3R 24054918 24054941 chr3R 24054994 24055017 8 76 2.5 0.5 1.5 3.2 99 chr3R 24054918 exon,5` UTR CG6000 +,CR44097 + chr3R 24054968 3` UTR,5` UTR CG6000 +,CR44097 + chr3R 24055017 3` UTR,5` UTR CG6000 +,CR44097 + chr3R_8_24050001 chr3R_24050001 RAL-705 1579 chr3R 24076914 24076944 chr3R 24078381 24078411 hobo 9 1467 3.0 3.5 3.2 2.1 1497 chr3R 24076914 intron 4EHP - chr3R 24077662 intron 4EHP - chr3R 24078411 intron 4EHP - chr3R_9_24075001 chr3R_24075001 RAL-705 1580 chr3R 24100642 24100661 chr3R 24100732 24100751 6 90 0.5 2.5 1.5 2.4 109 chr3R 24100642 intron 4EHP - chr3R 24100696 intron 4EHP - chr3R 24100751 intron 4EHP - chr3R_6_24100001 chr3R_24100001 RAL-705 1581 chr3R 24199740 24199773 chr3R 24199820 24199852 4 80 1.0 0.5 0.8 2.2 112 chr3R 24199740 intron twin - chr3R 24199796 intron twin - chr3R 24199852 intron twin - chr3R_4_24195001 chr3R_24195001 RAL-705 1582 chr3R 24207218 24207246 chr3R 24212294 24212322 flea 5 5075 1.0 2.0 1.5 2.0 5104 chr3R 24207218 intron twin - chr3R 24209770 intron twin - chr3R 24212322 intron twin - chr3R_5_24205001 chr3R_24205001 RAL-705 1583 chr3R 24431604 24431622 chr3R 24431683 24431700 9 79 2.0 2.0 2.0 3.0 96 chr3R 24431604 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431700 intron nAChRalpha1 - chr3R_9_24430001 chr3R_24430001 RAL-705 1584 chr3R 24442963 24442992 chr3R 24443174 24443205 4 212 0.5 1.5 1.0 2.0 242 chr3R 24442963 intron nAChRalpha1 - chr3R 24443084 intron nAChRalpha1 - chr3R 24443205 intron nAChRalpha1 - chr3R_4_24440001 chr3R_24440001 RAL-705 1585 chr3R 24493063 24493084 chr3R 24493148 24493170 6 86 2.0 0.5 1.2 2.7 107 chr3R 24493063 intergenic not near genes chr3R 24493116 intergenic not near genes chr3R 24493170 intergenic not near genes chr3R_6_24490001 chr3R_24490001 RAL-705 1586 chr3R 24493301 24493310 chr3R 24493529 24493538 BS 6 228 0.5 6.0 3.2 1.4 237 chr3R 24493301 intergenic not near genes chr3R 24493420 intergenic not near genes chr3R 24493538 intergenic not near genes chr3R_6_24490001 chr3R_24490001 RAL-705 1587 chr3R 24527804 24527833 chr3R 24527893 24527924 5 91 0.0 0.5 0.2 4.2 120 chr3R 24527804 intergenic CG6607 +,CG13618 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527924 intergenic CG6607 +,CG13618 + chr3R_5_24525001 chr3R_24525001 RAL-705 1588 chr3R 24667610 24667631 chr3R 24667687 24667708 6 77 1.5 0.0 0.8 3.3 98 chr3R 24667610 intron slo + chr3R 24667659 intron slo + chr3R 24667708 intron slo + chr3R_6_24665001 chr3R_24665001 RAL-705 1589 chr3R 24670055 24670192 chr3R 24670165 24670277 8 101 0.0 0.0 0.0 8.0 222 chr3R 24670055 intron slo + chr3R 24670166 intron slo + chr3R 24670277 intron slo + chr3R_8_24670001 chr3R_24670001 RAL-705 1590 chr3R 24730092 24730118 chr3R 24732470 24732496 Doc 8 2378 3.0 1.0 2.0 2.7 2404 chr3R 24730092 intron tok + chr3R 24731294 intron tok + chr3R 24732496 intron tok + chr3R_8_24730001 chr3R_24730001 RAL-705 1591 chr3R 24790683 24790715 chr3R 24790765 24790796 9 81 2.5 1.5 2.0 3.0 113 chr3R 24790683 intron Ets96B + chr3R 24790740 intron Ets96B + chr3R 24790796 intron Ets96B + chr3R_9_24790001 chr3R_24790001 RAL-705 1592 chr3R 24912479 24912495 chr3R 24912561 24912577 5 82 1.5 1.0 1.2 2.3 98 chr3R 24912479 intergenic not near genes chr3R 24912528 intergenic CR44267 + chr3R 24912577 intergenic CR44267 + chr3R_5_24910001 chr3R_24910001 RAL-705 1593 chr3R 24927126 24927151 chr3R 24931917 24931942 Doc 11 4791 5.5 2.0 3.8 2.3 4816 chr3R 24927126 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931942 intergenic CG11771 + chr3R_11_24925001 chr3R_24925001 RAL-705 1594 chr3R 25004900 25004915 chr3R 25004983 25004998 5 83 0.0 2.0 1.0 2.5 98 chr3R 25004900 intron tnc + chr3R 25004949 intron tnc + chr3R 25004998 intron tnc + chr3R_5_25000001 chr3R_25000001 RAL-705 1595 chr3R 25027542 25027565 chr3R 25027755 25027777 6 213 0.5 2.0 1.2 2.7 235 chr3R 25027542 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027777 intron Hr96 + chr3R_6_25025001 chr3R_25025001 RAL-705 1596 chr3R 25136398 25136419 chr3R 25136478 25136499 4 80 2.0 1.0 1.5 1.6 101 chr3R 25136398 3` UTR Bili + chr3R 25136448 3` UTR Bili + chr3R 25136499 3` UTR Bili + chr3R_4_25135001 chr3R_25135001 RAL-705 1597 chr3R 25166361 25166393 chr3R 25166437 25166469 4 76 0.0 1.0 0.5 2.7 108 chr3R 25166361 intergenic not near genes chr3R 25166415 intergenic not near genes chr3R 25166469 intergenic not near genes chr3R_4_25165001 chr3R_25165001 RAL-705 1598 chr3R 25268061 25268066 chr3R 25272650 25272655 4 4589 11.0 21.0 16.0 0.2 4594 chr3R 25268061 intron CR45214 - chr3R 25270358 exon,5` UTR CG11889 +,CG11891 + chr3R 25272655 3` UTR,exon CG11889 +,CG11891 + chr3R_4_25270001 chr3R_25270001 RAL-705 1599 chr3R 25411061 25411085 chr3R 25411139 25411163 4 78 3.0 2.5 2.8 1.1 102 chr3R 25411061 intron Fur1 - chr3R 25411112 intron Fur1 - chr3R 25411163 intron Fur1 - chr3R_4_25410001 chr3R_25410001 RAL-705 1600 chr3R 25422063 25422098 chr3R 25422143 25422179 8 81 2.0 0.0 1.0 4.0 116 chr3R 25422063 intron Fur1 - chr3R 25422121 intron Fur1 - chr3R 25422179 intron Fur1 - chr3R_8_25420001 chr3R_25420001 RAL-705 1601 chr3R 25512393 25512424 chr3R 25512472 25512503 10 79 0.5 3.0 1.8 3.6 110 chr3R 25512393 intergenic not near genes chr3R 25512448 intergenic not near genes chr3R 25512503 intergenic not near genes chr3R_10_25510001 chr3R_25510001 RAL-705 1602 chr3R 25612842 25612859 chr3R 25612949 25612966 5 106 0.0 4.0 2.0 1.7 124 chr3R 25612842 intron Npl4 - chr3R 25612904 intron Npl4 - chr3R 25612966 intron Npl4 - chr3R_5_25610001 chr3R_25610001 RAL-705 1603 chr3R 25725837 25725861 chr3R 25734997 25735021 roo 8 9160 3.0 2.5 2.8 2.1 9184 chr3R 25725837 intron LpR2 - chr3R 25730429 intron LpR2 - chr3R 25735021 intron LpR2 - chr3R_8_25730001 chr3R_25730001 RAL-705 1604 chr3R 25765877 25765909 chr3R 25765956 25765988 11 79 2.0 1.0 1.5 4.4 111 chr3R 25765877 intergenic not near genes chr3R 25765932 intergenic not near genes chr3R 25765988 intergenic not near genes chr3R_11_25765001 chr3R_25765001 RAL-705 1605 chr3R 25766480 25766502 chr3R 25766629 25766651 8 149 1.5 2.5 2.0 2.7 171 chr3R 25766480 intergenic not near genes chr3R 25766566 intergenic not near genes chr3R 25766651 intergenic not near genes chr3R_8_25765001 chr3R_25765001 RAL-705 1606 chr3R 25782018 25782049 chr3R 25782094 25782125 13 76 2.0 3.5 2.8 3.4 107 chr3R 25782018 intergenic not near genes chr3R 25782072 intergenic not near genes chr3R 25782125 intergenic not near genes chr3R_13_25780001 chr3R_25780001 RAL-705 1607 chr3R 25812034 25812054 chr3R 25812111 25812131 4 77 0.5 4.5 2.5 1.1 97 chr3R 25812034 5` UTR,exon Acam +,CG17770 + chr3R 25812082 5` UTR,exon Acam +,CG17770 + chr3R 25812131 5` UTR,exon Acam +,CG17770 + chr3R_4_25810001 chr3R_25810001 RAL-705 1608 chr3R 25832692 25832723 chr3R 25841871 25841905 roo 9 9181 2.0 3.5 2.8 2.4 9213 chr3R 25832692 exon alpha4GT2 + chr3R 25837298 intron alpha4GT2 + chr3R 25841905 exon alpha4GT2 + chr3R_9_25835001 chr3R_25835001 RAL-705 1609 chr3R 26075428 26075446 chr3R 26075511 26075530 6 84 2.0 1.0 1.5 2.4 102 chr3R 26075428 intergenic not near genes chr3R 26075479 intergenic not near genes chr3R 26075530 intergenic not near genes chr3R_6_26075001 chr3R_26075001 RAL-705 1610 chr3R 26142035 26142064 chr3R 26142112 26142141 6 77 1.0 1.5 1.2 2.7 106 chr3R 26142035 intergenic not near genes chr3R 26142088 intergenic not near genes chr3R 26142141 intergenic not near genes chr3R_6_26140001 chr3R_26140001 RAL-705 1611 chr3R 26148693 26148724 chr3R 26148773 26148804 8 80 0.5 1.5 1.0 4.0 111 chr3R 26148693 intergenic not near genes chr3R 26148748 intergenic not near genes chr3R 26148804 intergenic not near genes chr3R_8_26145001 chr3R_26145001 RAL-705 1612 chr3R 26235490 26235519 chr3R 26235572 26235598 8 81 0.0 1.5 0.8 4.4 108 chr3R 26235490 5` UTR CR42745 + chr3R 26235544 5` UTR CR42745 + chr3R 26235598 5` UTR CR42745 + chr3R_8_26235001 chr3R_26235001 RAL-705 1613 chr3R 26292108 26292136 chr3R 26292188 26292216 8 80 1.0 1.0 1.0 4.0 108 chr3R 26292108 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292216 intergenic not near genes chr3R_8_26290001 chr3R_26290001 RAL-705 1614 chr3R 26294717 26294748 chr3R 26294794 26294826 9 78 1.5 5.0 3.2 2.1 109 chr3R 26294717 intergenic not near genes chr3R 26294772 intergenic not near genes chr3R 26294826 intergenic not near genes chr3R_9_26290001 chr3R_26290001 RAL-705 1615 chr3R 26374840 26374854 chr3R 26374942 26374956 4 102 3.0 4.0 3.5 0.9 116 chr3R 26374840 intergenic not near genes chr3R 26374898 intergenic not near genes chr3R 26374956 intergenic not near genes chr3R_4_26370001 chr3R_26370001 RAL-705 1616 chr3R 26376324 26376356 chr3R 26385482 26385516 roo 13 9160 3.5 0.5 2.0 4.3 9192 chr3R 26376324 intergenic not near genes chr3R 26380920 intergenic not near genes chr3R 26385516 intergenic not near genes chr3R_13_26380001 chr3R_26380001 RAL-705 1617 chr3R 26510502 26510535 chr3R 26519563 26519596 roo 6 9061 1.0 4.0 2.5 1.7 9094 chr3R 26510502 intron plum - chr3R 26515049 intron plum - chr3R 26519596 intron,5` UTR plum -,CR45226 + chr3R_6_26515001 chr3R_26515001 RAL-705 1618 chr3R 26542044 26542065 chr3R 26542135 26542156 9 91 5.5 2.0 3.8 1.9 112 chr3R 26542044 intron scrib + chr3R 26542100 intron scrib + chr3R 26542156 intron scrib + chr3R_9_26540001 chr3R_26540001 RAL-705 1619 chr3R 26611342 26611368 chr3R 26611418 26611443 6 76 6.5 2.5 4.5 1.1 101 chr3R 26611342 intergenic not near genes chr3R 26611392 intergenic not near genes chr3R 26611443 intergenic not near genes chr3R_6_26610001 chr3R_26610001 RAL-705 1620 chr3R 26623661 26623673 chr3R 26623744 26623757 5 84 0.0 1.5 0.8 2.8 96 chr3R 26623661 intergenic TwdlB - chr3R 26623709 intergenic TwdlB - chr3R 26623757 intergenic TwdlB - chr3R_5_26620001 chr3R_26620001 RAL-705 1621 chr3R 26641637 26641663 chr3R 26641723 26641749 7 86 3.0 2.5 2.8 1.8 112 chr3R 26641637 intergenic not near genes chr3R 26641693 intergenic not near genes chr3R 26641749 intergenic not near genes chr3R_7_26640001 chr3R_26640001 RAL-705 1622 chr3R 26642732 26642757 chr3R 26643125 26643151 jockey 4 394 4.5 2.5 3.5 0.9 419 chr3R 26642732 intergenic not near genes chr3R 26642942 intergenic not near genes chr3R 26643151 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-705 1623 chr3R 26669665 26669677 chr3R 26669747 26669758 4 82 2.5 2.0 2.2 1.2 93 chr3R 26669665 intron beat-VII - chr3R 26669712 intron beat-VII - chr3R 26669758 intron beat-VII - chr3R_4_26665001 chr3R_26665001 RAL-705 1624 chr3R 26710833 26710851 chr3R 26710917 26710935 5 84 6.0 5.0 5.5 0.8 102 chr3R 26710833 intron amon - chr3R 26710884 intron amon - chr3R 26710935 intron amon - chr3R_5_26710001 chr3R_26710001 RAL-705 1625 chr3R 26740307 26740321 chr3R 26740383 26740397 7 76 0.0 3.5 1.8 2.5 90 chr3R 26740307 intergenic not near genes chr3R 26740352 intergenic not near genes chr3R 26740397 intergenic not near genes chr3R_7_26740001 chr3R_26740001 RAL-705 1626 chr3R 26770242 26770273 chr3R 26770319 26770350 9 77 0.5 1.5 1.0 4.5 108 chr3R 26770242 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770350 intergenic not near genes chr3R_9_26770001 chr3R_26770001 RAL-705 1627 chr3R 26806136 26806170 chr3R 26806240 26806274 7 104 1.0 1.5 1.2 3.2 138 chr3R 26806136 intron Tl + chr3R 26806205 intron Tl + chr3R 26806274 intron Tl + chr3R_7_26805001 chr3R_26805001 RAL-705 1628 chr3R 26908039 26908062 chr3R 26908136 26908159 7 97 0.5 2.0 1.2 3.2 120 chr3R 26908039 intron T48 + chr3R 26908099 intron T48 + chr3R 26908159 intron T48 + chr3R_7_26905001 chr3R_26905001 RAL-705 1629 chr3R 26990886 26990920 chr3R 26990970 26991004 16 84 1.5 5.0 3.2 3.8 118 chr3R 26990886 intergenic not near genes chr3R 26990945 intergenic not near genes chr3R 26991004 intergenic not near genes chr3R_16_26990001 chr3R_26990001 RAL-705 1630 chr3R 27028729 27028745 chr3R 27028808 27028824 7 79 4.5 2.0 3.2 1.7 95 chr3R 27028729 intron RYa-R + chr3R 27028776 intron RYa-R + chr3R 27028824 intron RYa-R + chr3R_7_27025001 chr3R_27025001 RAL-705 1631 chr3R 27041815 27041841 chr3R 27041905 27041931 5 90 2.0 2.5 2.2 1.6 116 chr3R 27041815 intron RYa-R + chr3R 27041873 intron RYa-R + chr3R 27041931 intron RYa-R + chr3R_5_27040001 chr3R_27040001 RAL-705 1632 chr3R 27140515 27140548 chr3R 27148125 27148158 412 12 7610 3.5 3.5 3.5 2.7 7643 chr3R 27140515 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148158 intron CG6051 - chr3R_12_27140001 chr3R_27140001 RAL-705 1633 chr3R 27245591 27245615 chr3R 27245681 27245705 14 90 4.5 2.5 3.5 3.1 114 chr3R 27245591 intergenic CG18766 - chr3R 27245648 intergenic CG18766 - chr3R 27245705 intergenic CG18766 - chr3R_14_27245001 chr3R_27245001 RAL-705 1634 chr3R 27315992 27316008 chr3R 27316068 27316084 11 76 2.5 2.0 2.2 3.4 92 chr3R 27315992 intron CG3339 - chr3R 27316038 intron CG3339 - chr3R 27316084 exon CG3339 - chr3R_11_27315001 chr3R_27315001 RAL-705 1635 chr3R 27342792 27342824 chr3R 27351373 27351405 Tirant 9 8581 2.0 2.0 2.0 3.0 8613 chr3R 27342792 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351405 intron CG42534 + chr3R_9_27345001 chr3R_27345001 RAL-705 1636 chr3R 27448815 27448848 chr3R 27448919 27448952 7 104 2.5 2.0 2.2 2.2 137 chr3R 27448815 intergenic not near genes chr3R 27448884 intergenic not near genes chr3R 27448952 intergenic not near genes chr3R_7_27445001 chr3R_27445001 RAL-705 1637 chr3R 27470882 27470902 chr3R 27470995 27471015 6 113 1.0 2.0 1.5 2.4 133 chr3R 27470882 intergenic not near genes chr3R 27470948 intergenic not near genes chr3R 27471015 intergenic not near genes chr3R_6_27470001 chr3R_27470001 RAL-705 1638 chr3R 27494330 27494345 chr3R 27494449 27494464 4 119 2.0 1.0 1.5 1.6 134 chr3R 27494330 intergenic not near genes chr3R 27494397 intergenic not near genes chr3R 27494464 intergenic not near genes chr3R_4_27490001 chr3R_27490001 RAL-705 1639 chr3R 27521159 27521180 chr3R 27530368 27530389 roo 7 9209 1.0 2.0 1.5 2.8 9230 chr3R 27521159 intron CG12885 + chr3R 27525774 intron CG12885 + chr3R 27530389 intron CG12885 + chr3R_7_27525001 chr3R_27525001 RAL-705 1640 chr3R 27555133 27555147 chr3R 27555310 27555324 7 176 1.5 3.5 2.5 2.0 191 chr3R 27555133 intron Klp98A - chr3R 27555228 intron Klp98A - chr3R 27555324 intron Klp98A - chr3R_7_27555001 chr3R_27555001 RAL-705 1641 chr3R 27648593 27648869 chr3R 27648676 27648946 12 79 5.0 0.0 2.5 3.4 353 chr3R 27648593 intron tau - chr3R 27648770 intron tau - chr3R 27648946 intron tau - chr3R_12_27645001 chr3R_27645001 RAL-705 1642 chr3R 27705358 27705367 chr3R 27705438 27705447 4 80 4.5 3.0 3.8 0.8 89 chr3R 27705358 exon CG12428 - chr3R 27705402 intron CG12428 - chr3R 27705447 intron CG12428 - chr3R_4_27705001 chr3R_27705001 RAL-705 1643 chr3R 27718577 27718598 chr3R 27718656 27718677 6 78 3.0 2.5 2.8 1.6 100 chr3R 27718577 intergenic not near genes chr3R 27718627 intergenic not near genes chr3R 27718677 intergenic not near genes chr3R_6_27715001 chr3R_27715001 RAL-705 1644 chr3R 27779269 27779286 chr3R 27779349 27779366 11 80 4.0 5.0 4.5 2.0 97 chr3R 27779269 exon CG34353 - chr3R 27779318 intron CG34353 - chr3R 27779366 intron CG34353 - chr3R_11_27775001 chr3R_27775001 RAL-705 1645 chr3R 27789079 27789109 chr3R 27789156 27789186 12 76 1.0 1.0 1.0 6.0 107 chr3R 27789079 exon CG34353 - chr3R 27789132 intron CG34353 - chr3R 27789186 intron CG34353 - chr3R_12_27785001 chr3R_27785001 RAL-705 1646 chr3R 27856759 27856786 chr3R 27858242 27858269 hopper2 10 1483 2.0 3.0 2.5 2.9 1510 chr3R 27856759 intron CG34353 - chr3R 27857514 intron CG34353 - chr3R 27858269 intron CG34353 - chr3R_10_27855001 chr3R_27855001 RAL-705 1647 chr3R 27875709 27875730 chr3R 27882764 27882785 297 9 7055 2.0 4.5 3.2 2.1 7076 chr3R 27875709 intron CG34353 - chr3R 27879247 intron CG34353 - chr3R 27882785 intron CG34353 - chr3R_9_27875001 chr3R_27875001 RAL-705 1648 chr3R 28035490 28035515 chr3R 28035566 28035592 5 77 0.0 1.0 0.5 3.3 102 chr3R 28035490 intron CG34362 + chr3R 28035541 intron CG34362 + chr3R 28035592 intron CG34362 + chr3R_5_28035001 chr3R_28035001 RAL-705 1649 chr3R 28068493 28068525 chr3R 28073935 28073967 I-element 4 5442 0.5 2.0 1.2 1.8 5474 chr3R 28068493 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073967 intron CG34362 + chr3R_4_28070001 chr3R_28070001 RAL-705 1650 chr3R 28156014 28156048 chr3R 28156352 28156384 13 338 1.0 2.5 1.8 4.6 370 chr3R 28156014 intron CG34354 + chr3R 28156199 intron CG34354 + chr3R 28156384 intron CG34354 + chr3R_13_28155001 chr3R_28155001 RAL-705 1651 chr3R 28173683 28173700 chr3R 28181113 28181130 mdg1 6 7430 2.0 2.5 2.2 1.9 7447 chr3R 28173683 intron CG34354 + chr3R 28177406 intron CG34354 + chr3R 28181130 intron CG34354 + chr3R_6_28175001 chr3R_28175001 RAL-705 1652 chr3R 28219223 28219229 chr3R 28219312 28219318 5 88 4.5 2.0 3.2 1.2 95 chr3R 28219223 intron CG34354 + chr3R 28219270 intron CG34354 + chr3R 28219318 intron CG34354 + chr3R_5_28215001 chr3R_28215001 RAL-705 1653 chr3R 28227642 28227658 chr3R 28227750 28227767 4 109 2.5 3.0 2.8 1.1 125 chr3R 28227642 intron CG34354 + chr3R 28227704 intron CG34354 + chr3R 28227767 intron CG34354 + chr3R_4_28225001 chr3R_28225001 RAL-705 1654 chr3R 28253350 28253365 chr3R 28255853 28255875 jockey 8 2509 1.5 1.0 1.2 3.6 2525 chr3R 28253350 intergenic not near genes chr3R 28254612 intergenic not near genes chr3R 28255875 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-705 1655 chr3R 28302106 28302130 chr3R 28302543 28302569 jockey 8 439 2.5 4.5 3.5 1.8 463 chr3R 28302106 intergenic not near genes chr3R 28302338 intergenic not near genes chr3R 28302569 intergenic not near genes chr3R_8_28300001 chr3R_28300001 RAL-705 1656 chr3R 28344063 28344091 chr3R 28344140 28344168 6 76 1.0 2.0 1.5 2.4 105 chr3R 28344063 exon Moca-cyp + chr3R 28344116 exon Moca-cyp + chr3R 28344168 exon Moca-cyp + chr3R_6_28340001 chr3R_28340001 RAL-705 1657 chr3R 28352512 28352545 chr3R 28352852 28352885 18 340 3.5 3.0 3.2 4.3 373 chr3R 28352512 exon Or98b + chr3R 28352698 exon Or98b + chr3R 28352885 exon Or98b + chr3R_18_28350001 chr3R_28350001 RAL-705 1658 chr3R 28424246 28424283 chr3R 28424324 28424362 15 79 0.5 1.5 1.0 7.5 116 chr3R 28424246 intron beat-VI + chr3R 28424304 intron beat-VI + chr3R 28424362 intron beat-VI + chr3R_15_28420001 chr3R_28420001 RAL-705 1659 chr3R 28425252 28425258 chr3R 28425331 28425337 6 79 7.0 5.5 6.2 0.8 85 chr3R 28425252 intron beat-VI + chr3R 28425294 intron beat-VI + chr3R 28425337 intron beat-VI + chr3R_6_28425001 chr3R_28425001 RAL-705 1660 chr3R 28478496 28478524 chr3R 28478572 28478600 11 76 1.0 0.5 0.8 6.1 104 chr3R 28478496 intergenic not near genes chr3R 28478548 intergenic not near genes chr3R 28478600 intergenic not near genes chr3R_11_28475001 chr3R_28475001 RAL-705 1661 chr3R 28599373 28599404 chr3R 28599520 28599551 10 147 2.0 1.5 1.8 3.6 178 chr3R 28599373 intergenic Noa36 - chr3R 28599462 intergenic Noa36 - chr3R 28599551 intergenic Noa36 - chr3R_10_28595001 chr3R_28595001 RAL-705 1662 chr3R 28626193 28626223 chr3R 28626293 28626323 11 100 0.0 0.5 0.2 9.2 130 chr3R 28626193 intron CG10011 - chr3R 28626258 intron CG10011 - chr3R 28626323 intron CG10011 - chr3R_11_28625001 chr3R_28625001 RAL-705 1663 chr3R 28742489 28742513 chr3R 28742565 28742589 5 76 2.0 1.5 1.8 1.8 100 chr3R 28742489 intron AstA-R2 - chr3R 28742539 intron AstA-R2 - chr3R 28742589 intron AstA-R2 - chr3R_5_28740001 chr3R_28740001 RAL-705 1664 chr3R 28758286 28758303 chr3R 28763903 28763920 roo 4 5617 2.5 0.0 1.2 1.8 5634 chr3R 28758286 intergenic aqrs - chr3R 28761103 intergenic not near genes chr3R 28763920 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-705 1665 chr3R 28775023 28775050 chr3R 28775162 28775189 7 139 1.5 1.0 1.2 3.2 166 chr3R 28775023 intergenic not near genes chr3R 28775106 intergenic not near genes chr3R 28775189 intergenic not near genes chr3R_7_28775001 chr3R_28775001 RAL-705 1666 chr3R 28792880 28792900 chr3R 28797975 28797995 jockey 4 5095 1.0 3.5 2.2 1.2 5115 chr3R 28792880 intergenic not near genes chr3R 28795438 intergenic not near genes chr3R 28797995 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-705 1667 chr3R 28811573 28811586 chr3R 28811716 28811729 4 143 4.0 1.0 2.5 1.1 156 chr3R 28811573 intergenic wdn - chr3R 28811651 intergenic wdn -,CG1646 + chr3R 28811729 intergenic CG1646 +,wdn - chr3R_4_28810001 chr3R_28810001 RAL-705 1668 chr3R 21907535 21907536 chr3R 28831797 28831798 12 6924262 19.0 10.0 14.5 0.8 6924263 chr3R 21907535 intergenic CG6678 + chr3R 25369666 intron Fur1 - chr3R 28831798 intron WASp - chr3R_12_25365001 chr3R_25365001 RAL-705 1669 chr3R 21907534 21907536 chr3R 28831799 28831802 118 6924266 19.0 10.0 14.5 7.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_118_25365001 chr3R_25365001 RAL-705 1670 chr3R 28989903 28989919 chr3R 28990078 28990092 7 174 3.5 3.5 3.5 1.6 189 chr3R 28989903 intergenic not near genes chr3R 28989998 intergenic not near genes chr3R 28990092 intergenic not near genes chr3R_7_28985001 chr3R_28985001 RAL-705 1671 chr3R 21907534 21907535 chr3R 29013337 29013340 15 7105805 19.5 19.0 19.2 0.7 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_15_25460001 chr3R_25460001 RAL-705 1672 chr3R 29032743 29032776 chr3R 29032820 29032853 7 76 1.5 0.0 0.8 3.9 110 chr3R 29032743 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032798 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032853 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_7_29030001 chr3R_29030001 RAL-705 1673 chr3R 29079383 29079410 chr3R 29080753 29080782 NOF 6 1372 1.5 4.5 3.0 1.5 1399 chr3R 29079383 intron CG11873 + chr3R 29080082 intron CG11873 + chr3R 29080782 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RAL-705 1674 chr3R 29237253 29237283 chr3R 29239274 29239304 6 2021 7.0 4.0 5.5 0.9 2051 chr3R 29237253 exon CG11951 - chr3R 29238278 intron CG11951 - chr3R 29239304 exon CG31427 - chr3R_6_29235001 chr3R_29235001 RAL-705 1675 chr3R 29239224 29239249 chr3R 29245515 29245539 7 6291 3.5 14.5 9.0 0.7 6315 chr3R 29239224 exon CG31427 - chr3R 29242382 exon CG31445 - chr3R 29245539 exon SP1029 - chr3R_7_29240001 chr3R_29240001 RAL-705 1676 chr3R 29240313 29240338 chr3R 29240397 29240422 9 84 3.0 2.0 2.5 2.6 109 chr3R 29240313 5` UTR CG31427 - chr3R 29240368 intergenic CG31427 -,CG31445 - chr3R 29240422 intergenic CG31427 -,CG31445 - chr3R_9_29240001 chr3R_29240001 RAL-705 1677 chr3R 29257574 29257581 chr3R 29257827 29257834 4 253 2.5 0.0 1.2 1.8 260 chr3R 29257574 intergenic CG45544 + chr3R 29257704 intergenic CG45544 + chr3R 29257834 intergenic CG45544 + chr3R_4_29255001 chr3R_29255001 RAL-705 1678 chr3R 29319822 29319858 chr3R 29320141 29320177 jockey 7 319 1.5 3.0 2.2 2.2 355 chr3R 29319822 intergenic Cnx99A - chr3R 29320000 intergenic Cnx99A - chr3R 29320177 intergenic not near genes chr3R_7_29315001 chr3R_29315001 RAL-705 1679 chr3R 29406620 29406645 chr3R 29407904 29407931 jockey 10 1285 2.0 3.0 2.5 2.9 1311 chr3R 29406620 intron Ptp99A + chr3R 29407276 intron Ptp99A + chr3R 29407931 intron Ptp99A + chr3R_10_29405001 chr3R_29405001 RAL-705 1680 chr3R 29429788 29429806 chr3R 29429865 29429884 7 77 3.5 1.5 2.5 2.0 96 chr3R 29429788 intron Ptp99A + chr3R 29429836 intron Ptp99A + chr3R 29429884 intron Ptp99A + chr3R_7_29425001 chr3R_29425001 RAL-705 1681 chr3R 29447818 29447839 chr3R 29447925 29447946 7 107 3.0 1.5 2.2 2.2 128 chr3R 29447818 intron Ptp99A + chr3R 29447882 intron Ptp99A + chr3R 29447946 intron Ptp99A + chr3R_7_29445001 chr3R_29445001 RAL-705 1682 chr3R 29449360 29449390 chr3R 29449438 29449468 10 78 2.0 2.5 2.2 3.1 108 chr3R 29449360 intron Ptp99A + chr3R 29449414 intron Ptp99A + chr3R 29449468 intron Ptp99A + chr3R_10_29445001 chr3R_29445001 RAL-705 1683 chr3R 29471922 29472040 chr3R 29472001 29472131 20 85 0.0 0.0 0.0 20.0 209 chr3R 29471922 intron Ptp99A + chr3R 29472026 intron Ptp99A + chr3R 29472131 intron Ptp99A + chr3R_20_29470001 chr3R_29470001 RAL-705 1684 chr3R 29498909 29498923 chr3R 29499039 29499053 5 130 4.0 2.0 3.0 1.2 144 chr3R 29498909 3` UTR CG2010 + chr3R 29498981 intergenic Trc8 -,CG2010 + chr3R 29499053 3` UTR Trc8 - chr3R_5_29495001 chr3R_29495001 RAL-705 1685 chr3R 29505892 29505926 chr3R 29505969 29506003 4 77 0.5 6.5 3.5 0.9 111 chr3R 29505892 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506003 intergenic not near genes chr3R_4_29505001 chr3R_29505001 RAL-705 1686 chr3R 29570823 29570842 chr3R 29570916 29570931 8 92 3.5 3.0 3.2 1.9 108 chr3R 29570823 intergenic not near genes chr3R 29570877 intergenic not near genes chr3R 29570931 intergenic not near genes chr3R_8_29570001 chr3R_29570001 RAL-705 1687 chr3R 29627295 29627311 chr3R 29627707 29627723 7 411 0.5 2.0 1.2 3.2 428 chr3R 29627295 intergenic not near genes chr3R 29627509 intergenic not near genes chr3R 29627723 intergenic not near genes chr3R_7_29625001 chr3R_29625001 RAL-705 1688 chr3R 29738270 29738298 chr3R 29739736 29739765 hobo 6 1464 2.5 2.5 2.5 1.7 1495 chr3R 29738270 intergenic CG1969 +,CG7598 + chr3R 29739018 intron CG1969 + chr3R 29739765 5` UTR CG1969 + chr3R_6_29735001 chr3R_29735001 RAL-705 1689 chr3R 29831824 29831843 chr3R 29831909 29831928 10 84 2.0 4.0 3.0 2.5 104 chr3R 29831824 exon Atg16 - chr3R 29831876 intron Atg16 - chr3R 29831928 exon Atg16 - chr3R_10_29830001 chr3R_29830001 RAL-705 1690 chr3R 29882030 29882050 chr3R 29891187 29891207 roo 6 9156 4.5 2.0 3.2 1.4 9177 chr3R 29882030 intron CG31038 + chr3R 29886618 intron CG31038 + chr3R 29891207 intron CG31038 + chr3R_6_29885001 chr3R_29885001 RAL-705 1691 chr3R 30032162 30032177 chr3R 30032241 30032254 4 78 4.5 0.5 2.5 1.1 92 chr3R 30032162 intron Axn + chr3R 30032208 intron Axn + chr3R 30032254 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-705 1692 chr3R 30084860 30084881 chr3R 30086326 30086348 hobo 5 1467 3.0 4.0 3.5 1.1 1488 chr3R 30084860 intron sima + chr3R 30085604 intron sima + chr3R 30086348 intron sima + chr3R_5_30085001 chr3R_30085001 RAL-705 1693 chr3R 30112606 30112634 chr3R 30112967 30112995 9 361 1.0 2.0 1.5 3.6 389 chr3R 30112606 intron sima + chr3R 30112800 intron sima + chr3R 30112995 intron sima + chr3R_9_30110001 chr3R_30110001 RAL-705 1694 chr3R 30124965 30124974 chr3R 30125042 30125051 4 77 1.5 3.0 2.2 1.2 86 chr3R 30124965 intergenic CG45073 - chr3R 30125008 intergenic CG45073 - chr3R 30125051 intergenic CG45073 - chr3R_4_30125001 chr3R_30125001 RAL-705 1695 chr3R 30182755 30182788 chr3R 30182894 30182927 5 139 2.0 1.5 1.8 1.8 172 chr3R 30182755 intergenic not near genes chr3R 30182841 intergenic not near genes chr3R 30182927 intergenic not near genes chr3R_5_30180001 chr3R_30180001 RAL-705 1696 chr3R 30210663 30210668 chr3R 30210743 30210748 4 80 0.0 2.5 1.2 1.8 85 chr3R 30210663 intergenic CecA1 +,Anp + chr3R 30210706 intergenic CecA1 +,Anp + chr3R 30210748 intergenic CecA1 +,Anp + chr3R_4_30210001 chr3R_30210001 RAL-705 1697 chr3R 30238779 30238795 chr3R 30239943 30239959 1360 5 1164 2.0 4.5 3.2 1.2 1180 chr3R 30238779 intergenic not near genes chr3R 30239369 intergenic not near genes chr3R 30239959 intergenic not near genes chr3R_5_30235001 chr3R_30235001 RAL-705 1698 chr3R 30268244 30268448 chr3R 30268323 30268527 12 80 4.0 1.0 2.5 3.4 283 chr3R 30268244 intergenic not near genes chr3R 30268386 intergenic not near genes chr3R 30268527 intergenic not near genes chr3R_12_30265001 chr3R_30265001 RAL-705 1699 chr3R 30317328 30317349 chr3R 30324920 30324940 roo 5 7592 0.0 1.0 0.5 3.3 7612 chr3R 30317328 intron hdc + chr3R 30321134 intron hdc + chr3R 30324940 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-705 1700 chr3R 30330495 30330525 chr3R 30330575 30330605 10 79 0.5 1.5 1.0 5.0 110 chr3R 30330495 intron hdc + chr3R 30330550 intron hdc + chr3R 30330605 intron hdc + chr3R_10_30330001 chr3R_30330001 RAL-705 1701 chr3R 30359364 30359385 chr3R 30359496 30359517 5 131 1.5 1.5 1.5 2.0 153 chr3R 30359364 intron hdc + chr3R 30359440 intron hdc + chr3R 30359517 intron hdc + chr3R_5_30355001 chr3R_30355001 RAL-705 1702 chr3R 30396222 30396246 chr3R 30404488 30404512 roo 10 8266 2.0 4.5 3.2 2.4 8290 chr3R 30396222 intergenic not near genes chr3R 30400367 intergenic not near genes chr3R 30404512 5` UTR CR45570 + chr3R_10_30400001 chr3R_30400001 RAL-705 1703 chr3R 30445508 30445532 chr3R 30445600 30445624 5 92 3.5 1.0 2.2 1.6 116 chr3R 30445508 intergenic aralar1 -,Osi23 - chr3R 30445566 intergenic aralar1 - chr3R 30445624 intergenic aralar1 - chr3R_5_30445001 chr3R_30445001 RAL-705 1704 chr3R 30456408 30456423 chr3R 30456489 30456504 5 81 2.5 2.5 2.5 1.4 96 chr3R 30456408 intergenic CG2224 - chr3R 30456456 3` UTR CG2224 - chr3R 30456504 3` UTR CG2224 - chr3R_5_30455001 chr3R_30455001 RAL-705 1705 chr3R 30458013 30458043 chr3R 30458093 30458123 10 80 3.0 0.0 1.5 4.0 110 chr3R 30458013 intron CG2224 - chr3R 30458068 intron CG2224 - chr3R 30458123 intron CG2224 - chr3R_10_30455001 chr3R_30455001 RAL-705 1706 chr3R 30480483 30480512 chr3R 30482949 30482980 jockey 10 2468 2.5 3.5 3.0 2.5 2497 chr3R 30480483 intron PH4alphaEFB + chr3R 30481732 intron PH4alphaEFB + chr3R 30482980 intron PH4alphaEFB + chr3R_10_30480001 chr3R_30480001 RAL-705 1707 chr3R 30627601 30627627 chr3R 30627681 30627707 9 80 4.0 3.0 3.5 2.0 106 chr3R 30627601 3` UTR CG2267 - chr3R 30627654 exon CG2267 - chr3R 30627707 exon CG2267 - chr3R_9_30625001 chr3R_30625001 RAL-705 1708 chr3R 30679529 30679552 chr3R 30686998 30687021 blood 6 7469 2.0 4.5 3.2 1.4 7492 chr3R 30679529 intergenic not near genes chr3R 30683275 intergenic not near genes chr3R 30687021 intergenic not near genes chr3R_6_30680001 chr3R_30680001 RAL-705 1709 chr3R 30690160 30690189 chr3R 30690244 30690273 12 84 2.5 4.0 3.2 2.9 113 chr3R 30690160 intergenic Spn100A + chr3R 30690216 intergenic Spn100A + chr3R 30690273 intergenic Spn100A + chr3R_12_30690001 chr3R_30690001 RAL-705 1710 chr3R 30791907 30791945 chr3R 30792023 30792061 20 116 7.0 6.5 6.8 2.6 154 chr3R 30791907 exon wts - chr3R 30791984 intron wts - chr3R 30792061 exon wts - chr3R_20_30790001 chr3R_30790001 RAL-705 1711 chr3R 30848438 30848472 chr3R 30848544 30848578 8 106 3.5 1.5 2.5 2.3 140 chr3R 30848438 intergenic not near genes chr3R 30848508 intergenic not near genes chr3R 30848578 intergenic not near genes chr3R_8_30845001 chr3R_30845001 RAL-705 1712 chr3R 30928187 30928199 chr3R 30928262 30928275 5 76 2.5 5.0 3.8 1.0 88 chr3R 30928187 intron Ptx1 + chr3R 30928231 intron Ptx1 + chr3R 30928275 intron Ptx1 + chr3R_5_30925001 chr3R_30925001 RAL-705 1713 chr3R 30948088 30948109 chr3R 30948279 30948300 8 191 2.5 6.5 4.5 1.5 212 chr3R 30948088 intergenic not near genes chr3R 30948194 intergenic not near genes chr3R 30948300 intergenic not near genes chr3R_8_30945001 chr3R_30945001 RAL-705 1714 chr3R 30973132 30973164 chr3R 30973293 30973325 5 161 0.0 1.0 0.5 3.3 193 chr3R 30973132 intron 5-HT7 - chr3R 30973228 intron 5-HT7 - chr3R 30973325 intron 5-HT7 - chr3R_5_30970001 chr3R_30970001 RAL-705 1715 chr3R 30982597 30982628 chr3R 30982689 30982720 7 90 0.0 1.5 0.8 3.9 123 chr3R 30982597 intron 5-HT7 - chr3R 30982658 intron 5-HT7 - chr3R 30982720 intron 5-HT7 - chr3R_7_30980001 chr3R_30980001 RAL-705 1716 chr3R 30996634 30996669 chr3R 30996858 30996893 7 224 3.0 2.0 2.5 2.0 259 chr3R 30996634 intron 5-HT7 - chr3R 30996764 intron 5-HT7 - chr3R 30996893 intron 5-HT7 - chr3R_7_30995001 chr3R_30995001 RAL-705 1717 chr3R 31069654 31069677 chr3R 31069749 31069772 7 95 1.5 5.0 3.2 1.7 118 chr3R 31069654 intron Sox100B + chr3R 31069713 intron Sox100B + chr3R 31069772 intron Sox100B + chr3R_7_31065001 chr3R_31065001 RAL-705 1718 chr3R 31137162 31137181 chr3R 31137241 31137260 4 80 3.0 2.5 2.8 1.1 98 chr3R 31137162 intron Gycbeta100B + chr3R 31137211 intron Gycbeta100B + chr3R 31137260 intron Gycbeta100B + chr3R_4_31135001 chr3R_31135001 RAL-705 1719 chr3R 31146751 31146779 chr3R 31146829 31146857 6 78 1.5 2.0 1.8 2.1 106 chr3R 31146751 intron Gycbeta100B + chr3R 31146804 intron Gycbeta100B + chr3R 31146857 intron Gycbeta100B + chr3R_6_31145001 chr3R_31145001 RAL-705 1720 chr3R 31279374 31279409 chr3R 31285563 31285600 diver 11 6190 3.0 1.0 2.0 3.7 6226 chr3R 31279374 intergenic not near genes chr3R 31282487 intergenic not near genes chr3R 31285600 intergenic not near genes chr3R_11_31280001 chr3R_31280001 RAL-705 1721 chr3R 31426885 31426912 chr3R 31426977 31427004 5 92 2.5 2.5 2.5 1.4 119 chr3R 31426885 intron Gprk2 + chr3R 31426944 intron Gprk2 + chr3R 31427004 intron Gprk2 + chr3R_5_31425001 chr3R_31425001 RAL-705 1722 chr3R 31435361 31435390 chr3R 31435513 31435542 15 152 2.0 2.5 2.2 4.7 181 chr3R 31435361 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435542 intron Gprk2 + chr3R_15_31435001 chr3R_31435001 RAL-705 1723 chr3R 31530827 31530845 chr3R 31531152 31531172 9 326 1.5 4.0 2.8 2.4 345 chr3R 31530827 intergenic not near genes chr3R 31531000 intergenic not near genes chr3R 31531172 intergenic not near genes chr3R_9_31530001 chr3R_31530001 RAL-705 1724 chr3R 31538485 31538520 chr3R 31538563 31538598 8 78 1.5 2.0 1.8 2.9 113 chr3R 31538485 intergenic not near genes chr3R 31538542 intergenic not near genes chr3R 31538598 intergenic not near genes chr3R_8_31535001 chr3R_31535001 RAL-705 1725 chr3R 31610118 31610139 chr3R 31610204 31610225 4 86 0.5 3.0 1.8 1.4 107 chr3R 31610118 intron CycG - chr3R 31610172 intron CycG - chr3R 31610225 intron CycG - chr3R_4_31610001 chr3R_31610001 RAL-705 1726 chr3R 31649125 31649149 chr3R 31649324 31649349 7 199 1.5 6.0 3.8 1.5 224 chr3R 31649125 intron kek6 + chr3R 31649237 intron kek6 + chr3R 31649349 intron kek6 + chr3R_7_31645001 chr3R_31645001 RAL-705 1727 chr3R 31691531 31691559 chr3R 31696297 31696325 Doc 6 4764 4.5 4.5 4.5 1.1 4794 chr3R 31691531 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696325 intergenic not near genes chr3R_6_31690001 chr3R_31690001 RAL-705 1728 chr3R 31743105 31743133 chr3R 31743181 31743209 9 77 21.0 19.5 20.2 0.4 104 chr3R 31743105 3` UTR Ef1alpha100E + chr3R 31743157 3` UTR Ef1alpha100E + chr3R 31743209 3` UTR Ef1alpha100E + chr3R_9_31740001 chr3R_31740001 RAL-705 1729 chr3R 31829384 31829404 chr3R 31829459 31829480 6 76 3.5 4.0 3.8 1.2 96 chr3R 31829384 intron RhoGAP100F + chr3R 31829432 intron RhoGAP100F + chr3R 31829480 intron RhoGAP100F + chr3R_6_31825001 chr3R_31825001 RAL-705 1730 chr3R 31877086 31877112 chr3R 31877161 31877189 8 77 3.0 3.0 3.0 2.0 103 chr3R 31877086 intron heph - chr3R 31877138 intron heph - chr3R 31877189 intron heph - chr3R_8_31875001 chr3R_31875001 RAL-705 1731 chr3R 31911682 31911708 chr3R 31911768 31911794 5 86 0.5 1.5 1.0 2.5 112 chr3R 31911682 intron heph - chr3R 31911738 intron heph - chr3R 31911794 intron heph - chr3R_5_31910001 chr3R_31910001 RAL-705 1732 chr3R 31926546 31926572 chr3R 31926631 31926657 5 85 3.0 1.0 2.0 1.7 111 chr3R 31926546 intron heph - chr3R 31926602 intron heph - chr3R 31926657 intron heph - chr3R_5_31925001 chr3R_31925001 RAL-705 1733 chr3R 31931197 31931214 chr3R 31931280 31931297 4 83 4.0 2.5 3.2 1.0 100 chr3R 31931197 intron heph - chr3R 31931247 intron heph - chr3R 31931297 intron heph - chr3R_4_31930001 chr3R_31930001 RAL-705 1734 chr3R 31946022 31946055 chr3R 31946111 31946143 8 88 1.0 2.0 1.5 3.2 121 chr3R 31946022 intron heph - chr3R 31946082 intron heph - chr3R 31946143 intron heph - chr3R_8_31945001 chr3R_31945001 RAL-705 1735 chr3R 31954425 31954450 chr3R 31954509 31954537 8 86 3.0 2.0 2.5 2.3 112 chr3R 31954425 intron heph - chr3R 31954481 intron heph - chr3R 31954537 intron heph - chr3R_8_31950001 chr3R_31950001 RAL-705 1736 chr3R 31997995 31998021 chr3R 32005465 32005491 blood 8 7470 1.0 2.0 1.5 3.2 7496 chr3R 31997995 intron heph - chr3R 32001743 intron heph - chr3R 32005491 intron heph - chr3R_8_32000001 chr3R_32000001 RAL-705 1737 chr4 662192 662206 chr4 662837 662849 INE-1 7 645 1.0 0.5 0.8 3.9 657 chr4 662192 intron gw - chr4 662520 intron gw - chr4 662849 5` UTR gw - chr4_7_660001 chr4_660001 RAL-705 1738 chr4 671608 671634 chr4 680191 680216 Tirant 4 8583 2.0 5.0 3.5 0.9 8608 chr4 671608 intron CG11360 + chr4 675912 intron CG11360 + chr4 680216 intron CG11360 + chr4_4_675001 chr4_675001 RAL-705 1739 chr4 852905 852923 chr4 853269 853287 12 363 1.5 4.0 2.8 3.2 382 chr4 852905 intergenic not near genes chr4 853096 intergenic not near genes chr4 853287 intergenic CG11148 - chr4_12_850001 chr4_850001 RAL-705 1740 chr4 853297 853321 chr4 853645 853668 6 348 16.5 13.0 14.8 0.4 371 chr4 853297 intergenic CG11148 - chr4 853482 intergenic CG11148 - chr4 853668 intergenic CG11148 - chr4_6_850001 chr4_850001 RAL-705 1741 chrX 188411 188433 chrX 188486 188509 4 75 2.5 2.5 2.5 1.1 98 chrX 188411 intron tyn + chrX 188460 intron tyn + chrX 188509 intron tyn + chrX_4_185001 chrX_185001 RAL-705 1742 chrX 295858 295881 chrX 303478 303501 412 9 7620 0.5 0.5 0.5 6.0 7643 chrX 295858 intron CG3777 + chrX 299680 intron CG3777 + chrX 303501 intron CG3777 + chrX_9_295001 chrX_295001 RAL-705 1743 chrX 428417 428451 chrX 434602 434636 3S18 8 6185 7.0 3.0 5.0 1.3 6219 chrX 428417 intron CG32816 - chrX 431526 intron CG32816 - chrX 434636 intron CG32816 - chrX_8_430001 chrX_430001 RAL-705 1744 chrX 551420 551455 chrX 558982 559017 412 6 7562 4.5 2.5 3.5 1.3 7597 chrX 551420 intron Appl + chrX 555218 intron Appl + chrX 559017 intron Appl + chrX_6_555001 chrX_555001 RAL-705 1745 chrX 611141 611163 chrX 611228 611252 6 89 2.0 4.5 3.2 1.4 111 chrX 611141 intron CG13366 - chrX 611196 intron CG13366 - chrX 611252 intron CG13366 - chrX_6_610001 chrX_610001 RAL-705 1746 chrX 667648 667681 chrX 667732 667765 10 84 2.5 2.0 2.2 3.1 117 chrX 667648 intergenic not near genes chrX 667706 intergenic not near genes chrX 667765 intergenic not near genes chrX_10_665001 chrX_665001 RAL-705 1747 chrX 670270 670294 chrX 670350 670370 8 79 0.0 0.5 0.2 6.7 100 chrX 670270 intergenic not near genes chrX 670320 intergenic not near genes chrX 670370 intergenic not near genes chrX_8_670001 chrX_670001 RAL-705 1748 chrX 680847 680867 chrX 680930 680950 5 83 2.0 4.0 3.0 1.2 103 chrX 680847 intergenic not near genes chrX 680898 intergenic not near genes chrX 680950 intergenic not near genes chrX_5_680001 chrX_680001 RAL-705 1749 chrX 695302 695317 chrX 695376 695392 4 76 2.0 3.0 2.5 1.1 90 chrX 695302 intron sdk + chrX 695347 intron sdk + chrX 695392 intron sdk + chrX_4_695001 chrX_695001 RAL-705 1750 chrX 715283 715310 chrX 715358 715386 8 75 3.0 2.0 2.5 2.3 103 chrX 715283 intron sdk + chrX 715334 intron sdk + chrX 715386 intron sdk + chrX_8_715001 chrX_715001 RAL-705 1751 chrX 802300 802320 chrX 802376 802396 4 76 2.0 2.0 2.0 1.3 96 chrX 802300 exon CG13359 - chrX 802348 exon CG13359 - chrX 802396 exon CG13359 - chrX_4_800001 chrX_800001 RAL-705 1752 chrX 827600 827634 chrX 835392 835426 roo 11 7792 2.0 2.5 2.2 3.4 7826 chrX 827600 intron CG43867 - chrX 831513 intron CG43867 - chrX 835426 intron CG43867 - chrX_11_830001 chrX_830001 RAL-705 1753 chrX 846391 846405 chrX 851470 851484 5 5079 22.5 6.5 14.5 0.3 5093 chrX 846391 intron,3` UTR CG43867 -,CG3713 - chrX 848938 intron CG43867 - chrX 851484 intron CG43867 - chrX_5_845001 chrX_845001 RAL-705 1754 chrX 906719 906734 chrX 908508 908523 S-element 9 1789 2.0 6.5 4.2 1.7 1804 chrX 906719 intron CG43867 - chrX 907621 intron CG43867 - chrX 908523 intron CG43867 - chrX_9_905001 chrX_905001 RAL-705 1755 chrX 1053117 1053120 chrX 16983076 16983077 8 15929958 9.0 11.5 10.2 0.7 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_8_9015001 chrX_9015001 RAL-705 1756 chrX 1253730 1253761 chrX 1253812 1253843 8 82 2.0 3.0 2.5 2.3 113 chrX 1253730 intron Atf3 - chrX 1253786 intron Atf3 - chrX 1253843 intron Atf3 - chrX_8_1250001 chrX_1250001 RAL-705 1757 chrX 1357782 1357806 chrX 1367952 1367976 Doc 5 10170 5.5 2.0 3.8 1.0 10194 chrX 1357782 intergenic png - chrX 1362879 intergenic not near genes chrX 1367976 intergenic not near genes chrX_5_1360001 chrX_1360001 RAL-705 1758 chrX 1518035 1518069 chrX 1523437 1523471 jockey 11 5401 4.0 1.0 2.5 3.1 5436 chrX 1518035 intergenic inc + chrX 1520753 intergenic not near genes chrX 1523471 intergenic not near genes chrX_11_1520001 chrX_1520001 RAL-705 1759 chrX 1627979 1628002 chrX 1635445 1635470 gtwin 11 7468 4.0 2.5 3.2 2.6 7491 chrX 1627979 intron,intron Mur2B -,br + chrX 1631724 intron,intron Mur2B -,br + chrX 1635470 intron,intron Mur2B -,br + chrX_11_1630001 chrX_1630001 RAL-705 1760 chrX 1750628 1750661 chrX 1750726 1750759 5 98 4.0 3.0 3.5 1.1 131 chrX 1750628 intron Scgdelta - chrX 1750694 intron Scgdelta - chrX 1750759 intron Scgdelta - chrX_5_1750001 chrX_1750001 RAL-705 1761 chrX 1753138 1753166 chrX 1753215 1753244 10 77 2.5 0.5 1.5 4.0 106 chrX 1753138 intron Scgdelta - chrX 1753191 intron Scgdelta - chrX 1753244 intron Scgdelta - chrX_10_1750001 chrX_1750001 RAL-705 1762 chrX 1903271 1903288 chrX 1903351 1903369 8 81 5.5 2.5 4.0 1.6 98 chrX 1903271 5` UTR CR43864 + chrX 1903320 5` UTR CR43864 + chrX 1903369 5` UTR CR43864 + chrX_8_1900001 chrX_1900001 RAL-705 1763 chrX 1930538 1930564 chrX 1938108 1938135 opus 5 7570 2.0 2.5 2.2 1.6 7597 chrX 1930538 intergenic CG11596 + chrX 1934336 intergenic not near genes chrX 1938135 3` UTR CG3857 - chrX_5_1930001 chrX_1930001 RAL-705 1764 chrX 1954889 1954919 chrX 1962829 1962859 Stalker2 8 7939 1.0 2.0 1.5 3.2 7970 chrX 1954889 intron Hr4 + chrX 1958874 intron Hr4 + chrX 1962859 intron Hr4 + chrX_8_1955001 chrX_1955001 RAL-705 1765 chrX 2146653 2146686 chrX 2146745 2146779 7 92 1.5 3.5 2.5 2.0 126 chrX 2146653 intron Pgd + chrX 2146716 intron Pgd + chrX 2146779 intron Pgd + chrX_7_2145001 chrX_2145001 RAL-705 1766 chrX 2399835 2399862 chrX 2408188 2408215 roo 7 8352 2.5 0.0 1.2 3.2 8380 chrX 2399835 intergenic not near genes chrX 2404025 intergenic not near genes chrX 2408215 intergenic not near genes chrX_7_2400001 chrX_2400001 RAL-705 1767 chrX 2578823 2578843 chrX 2578924 2578947 6 104 1.0 3.5 2.2 1.9 124 chrX 2578823 intergenic Pdfr +,Vha36-3 - chrX 2578885 intergenic Vha36-3 -,Pdfr + chrX 2578947 intergenic Vha36-3 -,Pdfr + chrX_6_2575001 chrX_2575001 RAL-705 1768 chrX 2610385 2610396 chrX 2617502 2617513 HMS-Beagle 4 7117 5.5 1.5 3.5 0.9 7128 chrX 2610385 intergenic CG8636 - chrX 2613949 intergenic not near genes chrX 2617513 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-705 1769 chrX 2664385 2664420 chrX 2665531 2665564 1360 11 1146 1.5 3.5 2.5 3.1 1179 chrX 2664385 intron sgg + chrX 2664974 intron sgg + chrX 2665564 intron sgg + chrX_11_2660001 chrX_2660001 RAL-705 1770 chrX 2803498 2803513 chrX 2803640 2803655 6 142 4.0 2.5 3.2 1.4 157 chrX 2803498 intron kirre + chrX 2803576 intron kirre + chrX 2803655 intron kirre + chrX_6_2800001 chrX_2800001 RAL-705 1771 chrX 2844912 2844926 chrX 2852322 2852336 mdg1 5 7410 1.5 3.5 2.5 1.4 7424 chrX 2844912 intron kirre + chrX 2848624 intron kirre + chrX 2852336 intron kirre + chrX_5_2845001 chrX_2845001 RAL-705 1772 chrX 2870654 2870677 chrX 2870740 2870763 5 86 3.0 1.5 2.2 1.6 109 chrX 2870654 intron kirre + chrX 2870708 intron kirre + chrX 2870763 intron kirre + chrX_5_2870001 chrX_2870001 RAL-705 1773 chrX 2888116 2888144 chrX 2888194 2888222 6 78 2.0 2.5 2.2 1.9 106 chrX 2888116 intron kirre + chrX 2888169 intron kirre + chrX 2888222 intron kirre + chrX_6_2885001 chrX_2885001 RAL-705 1774 chrX 2917422 2917442 chrX 2917577 2917599 9 157 3.0 2.0 2.5 2.6 177 chrX 2917422 intron kirre + chrX 2917510 intron kirre + chrX 2917599 intron kirre + chrX_9_2915001 chrX_2915001 RAL-705 1775 chrX 3058020 3058048 chrX 3058261 3058288 pogo 4 240 0.5 1.0 0.8 2.2 268 chrX 3058020 intron kirre + chrX 3058154 intron kirre + chrX 3058288 intron kirre + chrX_4_3055001 chrX_3055001 RAL-705 1776 chrX 3075636 3075658 chrX 3080942 3080964 Transpac 9 5305 2.5 4.0 3.2 2.1 5328 chrX 3075636 intron kirre + chrX 3078300 intron kirre + chrX 3080964 intron kirre + chrX_9_3075001 chrX_3075001 RAL-705 1777 chrX 3109462 3109473 chrX 3109539 3109549 4 77 1.5 3.0 2.2 1.2 87 chrX 3109462 intron kirre + chrX 3109506 intron kirre + chrX 3109549 intron kirre + chrX_4_3105001 chrX_3105001 RAL-705 1778 chrX 3243640 3243649 chrX 3243730 3243739 4 90 2.5 3.5 3.0 1.0 99 chrX 3243640 intron dnc + chrX 3243690 intron dnc + chrX 3243739 intron dnc + chrX_4_3240001 chrX_3240001 RAL-705 1779 chrX 3306343 3306372 chrX 3306425 3306454 5 82 3.5 0.0 1.8 1.8 111 chrX 3306343 intron dnc + chrX 3306398 intron dnc + chrX 3306454 intron dnc + chrX_5_3305001 chrX_3305001 RAL-705 1780 chrX 3346006 3346023 chrX 3346095 3346112 11 89 5.5 4.0 4.8 1.9 106 chrX 3346006 intron CR44886 - chrX 3346059 intron CR44886 - chrX 3346112 intron CR44886 - chrX_11_3345001 chrX_3345001 RAL-705 1781 chrX 3415019 3415050 chrX 3421204 3421235 3S18 10 6185 0.5 1.5 1.0 5.0 6216 chrX 3415019 intron,intron CR44999 +,CG12535 - chrX 3418127 intron,intron CR44999 +,CG12535 - chrX 3421235 intron,intron CR44999 +,CG12535 - chrX_10_3415001 chrX_3415001 RAL-705 1782 chrX 3493089 3493123 chrX 3502248 3502282 roo 7 9159 1.5 1.0 1.2 3.2 9193 chrX 3493089 intron,intron CR44999 +,Gas8 - chrX 3497686 intron,intron CR44999 +,Gas8 - chrX 3502282 intron,intron CR44999 +,Gas8 - chrX_7_3495001 chrX_3495001 RAL-705 1783 chrX 3597549 3597577 chrX 3619717 3619745 roo 12 22168 4.0 3.5 3.8 2.5 22196 chrX 3597549 intron AstA-R1 + chrX 3608647 intron AstA-R1 + chrX 3619745 intron AstA-R1 + chrX_12_3605001 chrX_3605001 RAL-705 1784 chrX 3630560 3630572 chrX 3630635 3630647 4 74 2.5 3.0 2.8 1.1 87 chrX 3630560 intron AstA-R1 + chrX 3630604 intron AstA-R1 + chrX 3630647 intron AstA-R1 + chrX_4_3630001 chrX_3630001 RAL-705 1785 chrX 3713125 3713136 chrX 3713234 3713245 5 109 2.0 3.0 2.5 1.4 120 chrX 3713125 intron Rala - chrX 3713185 intron Rala - chrX 3713245 intron Rala - chrX_5_3710001 chrX_3710001 RAL-705 1786 chrX 3866105 3866134 chrX 3866183 3866212 9 77 0.5 0.5 0.5 6.0 107 chrX 3866105 intron yin - chrX 3866158 intron yin - chrX 3866212 intron yin - chrX_9_3865001 chrX_3865001 RAL-705 1787 chrX 3881272 3881302 chrX 3881411 3881441 7 139 2.5 2.5 2.5 2.0 169 chrX 3881272 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881441 intron VhaAC39-1 + chrX_7_3880001 chrX_3880001 RAL-705 1788 chrX 3907473 3907486 chrX 3908201 3908215 4 729 2.0 1.5 1.8 1.4 742 chrX 3907473 intron CG42541 - chrX 3907844 intron CG42541 - chrX 3908215 intron CG42541 - chrX_4_3905001 chrX_3905001 RAL-705 1789 chrX 3915520 3915553 chrX 3915607 3915640 4 87 0.5 1.5 1.0 2.0 120 chrX 3915520 intron CG42541 - chrX 3915580 intron CG42541 - chrX 3915640 intron CG42541 - chrX_4_3915001 chrX_3915001 RAL-705 1790 chrX 3986863 3986891 chrX 3994496 3994524 412 10 7633 3.0 2.0 2.5 2.9 7661 chrX 3986863 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994524 intergenic not near genes chrX_10_3990001 chrX_3990001 RAL-705 1791 chrX 4101886 4101896 chrX 4101966 4101976 9 80 1.0 8.0 4.5 1.6 90 chrX 4101886 exon CG15375 + chrX 4101931 exon CG15375 + chrX 4101976 exon CG15375 + chrX_9_4100001 chrX_4100001 RAL-705 1792 chrX 4157890 4157918 chrX 4164925 4164953 297 10 7035 3.5 3.0 3.2 2.4 7063 chrX 4157890 intron Fas2 - chrX 4161422 intron Fas2 - chrX 4164953 intron Fas2 - chrX_10_4160001 chrX_4160001 RAL-705 1793 chrX 4204353 4204365 chrX 4204461 4204473 5 108 2.0 1.5 1.8 1.8 120 chrX 4204353 intron Fas2 - chrX 4204413 intron Fas2 - chrX 4204473 intron Fas2 - chrX_5_4200001 chrX_4200001 RAL-705 1794 chrX 4263613 4263630 chrX 4263697 4263717 4 86 1.5 3.0 2.2 1.2 104 chrX 4263613 intergenic not near genes chrX 4263665 intergenic not near genes chrX 4263717 intergenic not near genes chrX_4_4260001 chrX_4260001 RAL-705 1795 chrX 4293144 4293157 chrX 4293335 4293349 6 191 0.0 1.5 0.8 3.3 205 chrX 4293144 intergenic not near genes chrX 4293246 intergenic not near genes chrX 4293349 intergenic not near genes chrX_6_4290001 chrX_4290001 RAL-705 1796 chrX 4515835 4515851 chrX 4515913 4515929 6 78 2.0 2.5 2.2 1.9 94 chrX 4515835 intron CR32773 - chrX 4515882 intron CR32773 - chrX 4515929 intron CR32773 - chrX_6_4515001 chrX_4515001 RAL-705 1797 chrX 4525754 4525766 chrX 4525846 4525858 4 92 4.0 1.5 2.8 1.1 104 chrX 4525754 intron CR32773 - chrX 4525806 intron CR32773 - chrX 4525858 intron CR32773 - chrX_4_4525001 chrX_4525001 RAL-705 1798 chrX 4700394 4700422 chrX 4700737 4700765 jockey 11 343 1.5 3.5 2.5 3.1 371 chrX 4700394 3` UTR ctp + chrX 4700580 3` UTR ctp + chrX 4700765 3` UTR ctp + chrX_11_4700001 chrX_4700001 RAL-705 1799 chrX 4744799 4744809 chrX 4744884 4744894 7 85 3.5 1.5 2.5 2.0 95 chrX 4744799 intergenic not near genes chrX 4744846 intergenic not near genes chrX 4744894 intergenic not near genes chrX_7_4740001 chrX_4740001 RAL-705 1800 chrX 4763255 4763285 chrX 4763743 4763773 Stalker4 7 487 2.0 3.5 2.8 1.8 518 chrX 4763255 intergenic not near genes chrX 4763514 intergenic not near genes chrX 4763773 intergenic not near genes chrX_7_4760001 chrX_4760001 RAL-705 1801 chrX 4792381 4792402 chrX 4792814 4792835 jockey 6 433 2.0 3.0 2.5 1.7 454 chrX 4792381 intergenic not near genes chrX 4792608 intergenic not near genes chrX 4792835 intergenic not near genes chrX_6_4790001 chrX_4790001 RAL-705 1802 chrX 4827976 4827995 chrX 4835347 4835363 Stalker4 4 7370 2.5 1.5 2.0 1.3 7387 chrX 4827976 intergenic not near genes chrX 4831670 intergenic not near genes chrX 4835363 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-705 1803 chrX 4878892 4878909 chrX 4879001 4879017 5 109 1.0 0.5 0.8 2.8 125 chrX 4878892 intron CG42594 + chrX 4878954 intron CG42594 + chrX 4879017 intron CG42594 + chrX_5_4875001 chrX_4875001 RAL-705 1804 chrX 4894518 4894543 chrX 4894676 4894701 8 158 18.0 18.5 18.2 0.4 183 chrX 4894518 intron CG42594 + chrX 4894610 intron CG42594 + chrX 4894701 exon CG42594 + chrX_8_4890001 chrX_4890001 RAL-705 1805 chrX 4975584 4975611 chrX 4975761 4975788 5 177 1.0 1.0 1.0 2.5 204 chrX 4975584 intron CR44833 - chrX 4975686 intron CR44833 - chrX 4975788 intron CR44833 - chrX_5_4975001 chrX_4975001 RAL-705 1806 chrX 4990045 4990065 chrX 4997259 4997279 roo 4 7214 2.0 0.0 1.0 2.0 7234 chrX 4990045 intron CR44833 - chrX 4993662 intron CR44833 - chrX 4997279 intron CR44833 - chrX_4_4990001 chrX_4990001 RAL-705 1807 chrX 5096273 5096301 chrX 5103838 5103866 springer 6 7565 1.5 1.0 1.2 2.7 7593 chrX 5096273 intron,intron CG15465 +,rg + chrX 5100070 intron,intron CG15465 +,rg + chrX 5103866 intron,intron CG15465 +,rg + chrX_6_5100001 chrX_5100001 RAL-705 1808 chrX 5110675 5110686 chrX 5110760 5110771 5 85 2.0 2.0 2.0 1.7 96 chrX 5110675 intron,intron CG15465 +,rg + chrX 5110723 intron,intron CG15465 +,rg + chrX 5110771 intron,intron CG15465 +,rg + chrX_5_5110001 chrX_5110001 RAL-705 1809 chrX 5345040 5345057 chrX 5345226 5345243 5 186 3.0 4.5 3.8 1.0 203 chrX 5345040 intron SK + chrX 5345142 intron SK + chrX 5345243 intron SK + chrX_5_5345001 chrX_5345001 RAL-705 1810 chrX 5473594 5473619 chrX 5473670 5473695 7 76 1.0 3.0 2.0 2.3 101 chrX 5473594 intron SPR + chrX 5473644 intron SPR + chrX 5473695 intron SPR + chrX_7_5470001 chrX_5470001 RAL-705 1811 chrX 5487160 5487176 chrX 5487240 5487256 4 80 1.0 2.5 1.8 1.4 96 chrX 5487160 intron SPR + chrX 5487208 intron SPR + chrX 5487256 intron SPR + chrX_4_5485001 chrX_5485001 RAL-705 1812 chrX 5798865 5798892 chrX 5799027 5799053 8 161 0.0 2.5 1.2 3.6 188 chrX 5798865 intergenic not near genes chrX 5798959 intergenic not near genes chrX 5799053 intergenic not near genes chrX_8_5795001 chrX_5795001 RAL-705 1813 chrX 5883809 5883837 chrX 5884050 5884078 pogo 6 241 4.0 1.0 2.5 1.7 269 chrX 5883809 intron CR45668 - chrX 5883944 intron CR45668 - chrX 5884078 intron CR45668 - chrX_6_5880001 chrX_5880001 RAL-705 1814 chrX 5884169 5884190 chrX 5884410 5884430 pogo 12 241 3.5 1.5 2.5 3.4 261 chrX 5884169 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884430 intron CR45668 - chrX_12_5880001 chrX_5880001 RAL-705 1815 chrX 5917501 5917521 chrX 5917580 5917601 7 80 1.5 2.0 1.8 2.5 100 chrX 5917501 5` UTR CG3726 + chrX 5917551 5` UTR CG3726 + chrX 5917601 5` UTR CG3726 + chrX_7_5915001 chrX_5915001 RAL-705 1816 chrX 6118704 6118730 chrX 6118786 6118812 11 82 3.0 5.0 4.0 2.2 108 chrX 6118704 intron Ca-alpha1T - chrX 6118758 intron Ca-alpha1T - chrX 6118812 intron Ca-alpha1T - chrX_11_6115001 chrX_6115001 RAL-705 1817 chrX 6171585 6171615 chrX 6179018 6179048 Quasimodo 7 7433 1.0 3.5 2.2 2.2 7463 chrX 6171585 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179048 intron Ca-alpha1T - chrX_7_6175001 chrX_6175001 RAL-705 1818 chrX 6215351 6215367 chrX 6215434 6215450 4 82 0.0 6.0 3.0 1.0 99 chrX 6215351 intergenic not near genes chrX 6215400 intergenic not near genes chrX 6215450 intergenic not near genes chrX_4_6215001 chrX_6215001 RAL-705 1819 chrX 6306555 6306581 chrX 6306632 6306658 5 77 2.5 2.0 2.2 1.6 103 chrX 6306555 3` UTR CG3823 + chrX 6306606 3` UTR CG3823 + chrX 6306658 3` UTR CG3823 + chrX_5_6305001 chrX_6305001 RAL-705 1820 chrX 6312189 6312224 chrX 6312272 6312307 8 83 2.5 2.0 2.2 2.5 118 chrX 6312189 intron CG15894 + chrX 6312248 intron CG15894 + chrX 6312307 intron CG15894 + chrX_8_6310001 chrX_6310001 RAL-705 1821 chrX 6315180 6315210 chrX 6315258 6315288 7 78 1.5 1.5 1.5 2.8 108 chrX 6315180 intron CG15894 + chrX 6315234 intron CG15894 + chrX 6315288 intron CG15894 + chrX_7_6315001 chrX_6315001 RAL-705 1822 chrX 6388675 6388691 chrX 6388751 6388767 6 76 2.0 4.5 3.2 1.4 92 chrX 6388675 intergenic not near genes chrX 6388721 intergenic not near genes chrX 6388767 intergenic not near genes chrX_6_6385001 chrX_6385001 RAL-705 1823 chrX 6392868 6392898 chrX 6397633 6397662 Doc 9 4765 1.5 3.5 2.5 2.6 4794 chrX 6392868 intergenic not near genes chrX 6395265 intergenic not near genes chrX 6397662 intergenic not near genes chrX_9_6395001 chrX_6395001 RAL-705 1824 chrX 6562817 6562850 chrX 6571299 6571348 Tirant 6 8484 2.0 0.0 1.0 3.0 8531 chrX 6562817 intron CG34417 + chrX 6567082 intron CG34417 + chrX 6571348 intron CG34417 + chrX_6_6565001 chrX_6565001 RAL-705 1825 chrX 6605477 6605505 chrX 6608499 6608527 Burdock 8 3022 4.0 2.0 3.0 2.0 3050 chrX 6605477 intron pigs + chrX 6607002 intron pigs + chrX 6608527 intron pigs + chrX_8_6605001 chrX_6605001 RAL-705 1826 chrX 6618465 6618475 chrX 6618542 6618553 4 78 5.0 6.5 5.8 0.6 88 chrX 6618465 intron pigs + chrX 6618509 intron pigs + chrX 6618553 intron pigs + chrX_4_6615001 chrX_6615001 RAL-705 1827 chrX 6897591 6897711 chrX 6897669 6897819 7 105 1.5 1.5 1.5 2.8 228 chrX 6897591 intergenic not near genes chrX 6897705 intergenic not near genes chrX 6897819 intergenic not near genes chrX_7_6895001 chrX_6895001 RAL-705 1828 chrX 6989504 6989534 chrX 6989590 6989621 9 86 1.0 1.5 1.2 4.1 117 chrX 6989504 intron ogre - chrX 6989562 intron ogre - chrX 6989621 intron ogre - chrX_9_6985001 chrX_6985001 RAL-705 1829 chrX 7023608 7023634 chrX 7030998 7031024 Tabor 9 7390 3.5 5.5 4.5 1.6 7416 chrX 7023608 intron CG12541 - chrX 7027316 intron CG12541 - chrX 7031024 intron CG12541 - chrX_9_7025001 chrX_7025001 RAL-705 1830 chrX 7125246 7125278 chrX 7134405 7134437 roo 7 9159 2.0 3.0 2.5 2.0 9191 chrX 7125246 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134437 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-705 1831 chrX 7298207 7298215 chrX 7298301 7298309 4 94 2.0 2.0 2.0 1.3 102 chrX 7298207 intron,intron CR44357 -,CG1677 - chrX 7298258 intron,intron CR44357 -,CG1677 - chrX 7298309 intron,intron CR44357 -,CG1677 - chrX_4_7295001 chrX_7295001 RAL-705 1832 chrX 7570636 7570667 chrX 7570770 7570801 5 134 1.0 0.5 0.8 2.8 165 chrX 7570636 intergenic not near genes chrX 7570718 intergenic not near genes chrX 7570801 intergenic not near genes chrX_5_7570001 chrX_7570001 RAL-705 1833 chrX 7702909 7702919 chrX 7703348 7703358 jockey 6 439 4.0 3.5 3.8 1.2 449 chrX 7702909 intron CHES-1-like - chrX 7703134 intron CHES-1-like - chrX 7703358 intron CHES-1-like - chrX_6_7700001 chrX_7700001 RAL-705 1834 chrX 7752925 7752955 chrX 7753002 7753032 11 77 1.5 0.5 1.0 5.5 107 chrX 7752925 intergenic not near genes chrX 7752978 intergenic not near genes chrX 7753032 intergenic not near genes chrX_11_7750001 chrX_7750001 RAL-705 1835 chrX 7809989 7810009 chrX 7810089 7810115 8 104 1.5 2.0 1.8 2.9 126 chrX 7809989 intergenic not near genes chrX 7810052 intergenic not near genes chrX 7810115 intergenic not near genes chrX_8_7810001 chrX_7810001 RAL-705 1836 chrX 7832441 7832460 chrX 7832527 7832549 6 88 2.0 4.5 3.2 1.4 108 chrX 7832441 intron CG1402 + chrX 7832495 intron CG1402 + chrX 7832549 intron CG1402 + chrX_6_7830001 chrX_7830001 RAL-705 1837 chrX 7845726 7845757 chrX 7847217 7847248 hopper2 4 1491 1.5 2.0 1.8 1.4 1522 chrX 7845726 intergenic not near genes chrX 7846487 intergenic not near genes chrX 7847248 intergenic not near genes chrX_4_7845001 chrX_7845001 RAL-705 1838 chrX 7881860 7881880 chrX 7881942 7881962 4 82 0.5 2.0 1.2 1.8 102 chrX 7881860 intergenic Ir7f -,Ir7e - chrX 7881911 intergenic Ir7f -,Ir7e - chrX 7881962 3` UTR Ir7f - chrX_4_7880001 chrX_7880001 RAL-705 1839 chrX 7931595 7931607 chrX 7931680 7931692 4 85 0.5 2.0 1.2 1.8 97 chrX 7931595 intergenic CG10778 -,CG10777 - chrX 7931644 intergenic CG10778 -,CG10777 - chrX 7931692 intergenic CG10778 -,CG10777 - chrX_4_7930001 chrX_7930001 RAL-705 1840 chrX 8305189 8305221 chrX 8305270 8305302 8 80 1.5 1.5 1.5 3.2 113 chrX 8305189 intron nAChRalpha3 - chrX 8305246 intron nAChRalpha3 - chrX 8305302 intron nAChRalpha3 - chrX_8_8305001 chrX_8305001 RAL-705 1841 chrX 8421466 8421492 chrX 8421558 8421577 11 91 3.5 3.0 3.2 2.6 111 chrX 8421466 intron Trf2 + chrX 8421522 intron Trf2 + chrX 8421577 intron Trf2 + chrX_11_8420001 chrX_8420001 RAL-705 1842 chrX 8845035 8845050 chrX 8845157 8845172 4 122 1.0 1.0 1.0 2.0 137 chrX 8845035 intron CG12075 + chrX 8845104 intron CG12075 + chrX 8845172 intron CG12075 + chrX_4_8845001 chrX_8845001 RAL-705 1843 chrX 8948759 8948792 chrX 8956269 8956301 roo 8 7510 0.5 3.5 2.0 2.7 7542 chrX 8948759 intron rdgA + chrX 8952530 intron rdgA + chrX 8956301 intron rdgA + chrX_8_8950001 chrX_8950001 RAL-705 1844 chrX 9218076 9218086 chrX 9218165 9218177 4 90 2.5 2.5 2.5 1.1 101 chrX 9218076 3` UTR t - chrX 9218126 3` UTR t - chrX 9218177 3` UTR t - chrX_4_9215001 chrX_9215001 RAL-705 1845 chrX 9231241 9231272 chrX 9231323 9231355 6 82 1.5 2.5 2.0 2.0 114 chrX 9231241 exon CG12121 - chrX 9231298 exon CG12121 - chrX 9231355 exon CG12121 - chrX_6_9230001 chrX_9230001 RAL-705 1846 chrX 9439433 9439457 chrX 9439510 9439534 10 76 1.5 2.0 1.8 3.6 101 chrX 9439433 intron mgl - chrX 9439484 intron mgl - chrX 9439534 intron mgl - chrX_10_9435001 chrX_9435001 RAL-705 1847 chrX 9508135 9508167 chrX 9509653 9509685 jockey 12 1518 1.0 2.0 1.5 4.8 1550 chrX 9508135 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509685 intron CG32700 - chrX_12_9505001 chrX_9505001 RAL-705 1848 chrX 9575790 9575817 chrX 9576113 9576141 mdg3 16 324 3.5 3.0 3.2 3.8 351 chrX 9575790 intron,exon CG32699 -,CG42395 - chrX 9575966 intron,intron CG32699 -,CG42395 - chrX 9576141 intron,5` UTR CG32699 -,CG42395 - chrX_16_9575001 chrX_9575001 RAL-705 1849 chrX 9595353 9595384 chrX 9595435 9595469 12 84 2.5 1.0 1.8 4.3 116 chrX 9595353 5` UTR CR45543 + chrX 9595411 5` UTR CR45543 + chrX 9595469 intergenic CR45543 + chrX_12_9595001 chrX_9595001 RAL-705 1850 chrX 9664065 9664091 chrX 9664144 9664170 8 79 6.5 4.0 5.2 1.3 105 chrX 9664065 intergenic not near genes chrX 9664118 intergenic not near genes chrX 9664170 intergenic not near genes chrX_8_9660001 chrX_9660001 RAL-705 1851 chrX 9749170 9749187 chrX 9749318 9749335 6 148 0.5 1.0 0.8 3.3 165 chrX 9749170 intron Sp1 + chrX 9749252 intron Sp1 + chrX 9749335 intron Sp1 + chrX_6_9745001 chrX_9745001 RAL-705 1852 chrX 9791861 9791896 chrX 9791958 9791993 10 97 0.5 2.5 1.5 4.0 132 chrX 9791861 intron CG32698 + chrX 9791927 intron CG32698 + chrX 9791993 intron CG32698 + chrX_10_9790001 chrX_9790001 RAL-705 1853 chrX 9839369 9839374 chrX 9839451 9839456 4 82 0.0 4.5 2.2 1.2 87 chrX 9839369 intron CG32698 + chrX 9839412 intron CG32698 + chrX 9839456 intron CG32698 + chrX_4_9835001 chrX_9835001 RAL-705 1854 chrX 10087651 10087670 chrX 10087736 10087755 5 85 3.5 2.0 2.8 1.3 104 chrX 10087651 intron RhoU + chrX 10087703 intron RhoU + chrX 10087755 intron RhoU + chrX_5_10085001 chrX_10085001 RAL-705 1855 chrX 10138219 10138248 chrX 10145723 10145752 412 5 7504 3.0 2.5 2.8 1.3 7533 chrX 10138219 intron,intron RhoU +,CR44894 - chrX 10141986 intron,intron RhoU +,CR44894 - chrX 10145752 intron,intron RhoU +,CR44894 - chrX_5_10140001 chrX_10140001 RAL-705 1856 chrX 10151924 10151930 chrX 10152001 10152007 6 77 2.5 1.5 2.0 2.0 83 chrX 10151924 intron CR44894 - chrX 10151966 intron CR44894 - chrX 10152007 intron CR44894 - chrX_6_10150001 chrX_10150001 RAL-705 1857 chrX 10154285 10154311 chrX 10154361 10154387 9 76 0.5 1.0 0.8 5.0 102 chrX 10154285 intron,intron CR44894 -,CG12645 + chrX 10154336 intron,intron CR44894 -,CG12645 + chrX 10154387 intron,exon CR44894 -,CG12645 + chrX_9_10150001 chrX_10150001 RAL-705 1858 chrX 10216845 10216852 chrX 10216926 10216933 5 81 6.5 8.0 7.2 0.6 88 chrX 10216845 3` UTR l(1)G0230 + chrX 10216889 3` UTR l(1)G0230 + chrX 10216933 3` UTR l(1)G0230 + chrX_5_10215001 chrX_10215001 RAL-705 1859 chrX 10369108 10369126 chrX 10369275 10369292 7 166 3.0 2.5 2.8 1.8 184 chrX 10369108 intron CG17841 + chrX 10369200 intron CG17841 + chrX 10369292 intron CG17841 + chrX_7_10365001 chrX_10365001 RAL-705 1860 chrX 10506502 10506526 chrX 10506588 10506611 6 86 3.0 1.0 2.0 2.0 109 chrX 10506502 intron spri - chrX 10506556 intron spri - chrX 10506611 intron spri - chrX_6_10505001 chrX_10505001 RAL-705 1861 chrX 10550337 10550364 chrX 10550415 10550442 6 78 2.5 2.5 2.5 1.7 105 chrX 10550337 intron spri - chrX 10550390 intron spri - chrX 10550442 intron spri - chrX_6_10550001 chrX_10550001 RAL-705 1862 chrX 10550855 10550887 chrX 10552320 10552354 hobo 6 1467 1.5 2.0 1.8 2.1 1499 chrX 10550855 intron spri - chrX 10551604 intron spri - chrX 10552354 intron spri - chrX_6_10550001 chrX_10550001 RAL-705 1863 chrX 10686049 10686080 chrX 10691186 10691217 roo 4 5137 2.0 1.5 1.8 1.4 5168 chrX 10686049 intron X11Lbeta + chrX 10688633 intron X11Lbeta + chrX 10691217 intron X11Lbeta + chrX_4_10685001 chrX_10685001 RAL-705 1864 chrX 10719125 10719151 chrX 10719209 10719235 5 84 0.0 1.5 0.8 2.8 110 chrX 10719125 intron CG32676 - chrX 10719180 intron CG32676 - chrX 10719235 intron CG32676 - chrX_5_10715001 chrX_10715001 RAL-705 1865 chrX 10811864 10811896 chrX 10811956 10811988 10 92 1.5 0.0 0.8 5.6 124 chrX 10811864 intron Imp - chrX 10811926 intron Imp - chrX 10811988 intron Imp - chrX_10_10810001 chrX_10810001 RAL-705 1866 chrX 10939407 10939429 chrX 10939512 10939533 9 105 2.0 1.5 1.8 3.2 126 chrX 10939407 intron Myo10A + chrX 10939470 intron Myo10A + chrX 10939533 intron Myo10A + chrX_9_10935001 chrX_10935001 RAL-705 1867 chrX 11062444 11062478 chrX 11062539 11062573 6 95 2.0 1.5 1.8 2.1 129 chrX 11062444 exon CG1537 - chrX 11062508 intron CG1537 - chrX 11062573 intron CG1537 - chrX_6_11060001 chrX_11060001 RAL-705 1868 chrX 11133935 11133949 chrX 11134519 11134533 5 584 31.0 18.5 24.8 0.2 598 chrX 11133935 intron Klp10A - chrX 11134234 intron Klp10A - chrX 11134533 intron Klp10A - chrX_5_11130001 chrX_11130001 RAL-705 1869 chrX 11184246 11184280 chrX 11189325 11189356 flea 4 5078 0.0 1.5 0.8 2.2 5110 chrX 11184246 intergenic not near genes chrX 11186801 intergenic not near genes chrX 11189356 intergenic not near genes chrX_4_11185001 chrX_11185001 RAL-705 1870 chrX 11205293 11205324 chrX 11205369 11205400 13 76 3.5 2.5 3.0 3.2 107 chrX 11205293 intergenic not near genes chrX 11205346 intergenic not near genes chrX 11205400 intergenic not near genes chrX_13_11205001 chrX_11205001 RAL-705 1871 chrX 11256086 11256114 chrX 11256669 11256696 13 583 1.5 2.0 1.8 4.6 610 chrX 11256086 intron CG44422 - chrX 11256391 intron CG44422 - chrX 11256696 intron CG44422 - chrX_13_11255001 chrX_11255001 RAL-705 1872 chrX 11287171 11287198 chrX 11287257 11287284 5 86 0.0 1.0 0.5 3.3 113 chrX 11287171 intron CG44422 - chrX 11287228 intron CG44422 - chrX 11287284 intron CG44422 - chrX_5_11285001 chrX_11285001 RAL-705 1873 chrX 11291686 11291717 chrX 11291768 11291799 5 82 0.0 3.5 1.8 1.8 113 chrX 11291686 intron CG44422 - chrX 11291742 intron CG44422 - chrX 11291799 intron CG44422 - chrX_5_11290001 chrX_11290001 RAL-705 1874 chrX 11312063 11312082 chrX 11319416 11319435 Stalker2 5 7353 2.5 1.5 2.0 1.7 7372 chrX 11312063 intergenic not near genes chrX 11315749 intergenic not near genes chrX 11319435 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-705 1875 chrX 11499108 11499142 chrX 11499185 11499220 6 78 0.5 1.5 1.0 3.0 112 chrX 11499108 intron Drak + chrX 11499164 intron Drak + chrX 11499220 intron Drak + chrX_6_11495001 chrX_11495001 RAL-705 1876 chrX 11633420 11633435 chrX 11640473 11640489 297 4 7054 2.0 1.5 1.8 1.4 7069 chrX 11633420 intron Ptp10D + chrX 11636954 intron Ptp10D + chrX 11640489 intron Ptp10D + chrX_4_11635001 chrX_11635001 RAL-705 1877 chrX 11762232 11762235 chrX 11762318 11762321 4 86 0.0 0.0 0.0 4.0 89 chrX 11762232 intron m + chrX 11762276 intron m + chrX 11762321 intron m + chrX_4_11760001 chrX_11760001 RAL-705 1878 chrX 11836195 11836226 chrX 11836276 11836307 4 81 0.5 3.0 1.8 1.4 112 chrX 11836195 3` UTR rudhira + chrX 11836251 3` UTR rudhira + chrX 11836307 3` UTR rudhira + chrX_4_11835001 chrX_11835001 RAL-705 1879 chrX 12248757 12248763 chrX 12248849 12248855 5 92 4.5 3.5 4.0 1.0 98 chrX 12248757 intron Ten-a + chrX 12248806 intron Ten-a + chrX 12248855 intron Ten-a + chrX_5_12245001 chrX_12245001 RAL-705 1880 chrX 12350772 12350803 chrX 12350853 12350883 5 81 3.0 0.0 1.5 2.0 111 chrX 12350772 intergenic not near genes chrX 12350828 intergenic not near genes chrX 12350883 intergenic not near genes chrX_5_12350001 chrX_12350001 RAL-705 1881 chrX 12356861 12356877 chrX 12356971 12356988 13 112 1.0 4.5 2.8 3.4 127 chrX 12356861 intergenic not near genes chrX 12356924 intergenic not near genes chrX 12356988 intergenic not near genes chrX_13_12355001 chrX_12355001 RAL-705 1882 chrX 12442089 12442118 chrX 12442171 12442200 7 82 1.0 0.0 0.5 4.7 111 chrX 12442089 intron Pkcdelta + chrX 12442144 intron Pkcdelta + chrX 12442200 intron Pkcdelta + chrX_7_12440001 chrX_12440001 RAL-705 1883 chrX 12533812 12533824 chrX 12533888 12533900 5 76 0.0 2.5 1.2 2.3 88 chrX 12533812 intron CG43921 - chrX 12533856 intron CG43921 - chrX 12533900 intron CG43921 - chrX_5_12530001 chrX_12530001 RAL-705 1884 chrX 12726060 12726084 chrX 12726743 12726772 5 686 2.5 1.0 1.8 1.8 712 chrX 12726060 intron,intron Smr -,CR43963 - chrX 12726416 intron,intron Smr -,CR43963 - chrX 12726772 intron,intron Smr -,CR43963 - chrX_5_12725001 chrX_12725001 RAL-705 1885 chrX 12785434 12785463 chrX 12785511 12785540 5 77 1.5 2.5 2.0 1.7 106 chrX 12785434 intergenic Pde9 -,CG32647 - chrX 12785487 intergenic Pde9 - chrX 12785540 intergenic Pde9 - chrX_5_12785001 chrX_12785001 RAL-705 1886 chrX 13146612 13146624 chrX 13146700 13146711 4 88 1.5 5.0 3.2 1.0 99 chrX 13146612 intron CG32645 + chrX 13146662 intron CG32645 + chrX 13146711 intron CG32645 + chrX_4_13145001 chrX_13145001 RAL-705 1887 chrX 13172352 13172378 chrX 13172428 13172454 6 76 4.0 3.0 3.5 1.3 102 chrX 13172352 exon CG34411 - chrX 13172403 intron CG34411 - chrX 13172454 intron CG34411 - chrX_6_13170001 chrX_13170001 RAL-705 1888 chrX 13278150 13278177 chrX 13278233 13278260 4 83 2.5 0.0 1.2 1.8 110 chrX 13278150 intron HDAC4 - chrX 13278205 intron HDAC4 - chrX 13278260 intron HDAC4 - chrX_4_13275001 chrX_13275001 RAL-705 1889 chrX 13429462 13429497 chrX 13430609 13430646 jockey 14 1149 3.0 4.0 3.5 3.1 1184 chrX 13429462 intergenic not near genes chrX 13430054 intergenic not near genes chrX 13430646 intergenic not near genes chrX_14_13430001 chrX_13430001 RAL-705 1890 chrX 13443411 13443420 chrX 13443488 13443496 4 77 3.0 5.5 4.2 0.8 85 chrX 13443411 intergenic not near genes chrX 13443454 intergenic not near genes chrX 13443496 intergenic not near genes chrX_4_13440001 chrX_13440001 RAL-705 1891 chrX 13482058 13482090 chrX 13482315 13482347 10 256 1.0 1.5 1.2 4.5 289 chrX 13482058 intron Neto + chrX 13482202 intron Neto + chrX 13482347 intron Neto + chrX_10_13480001 chrX_13480001 RAL-705 1892 chrX 13546995 13547016 chrX 13547087 13547110 7 93 1.5 1.5 1.5 2.8 115 chrX 13546995 intergenic not near genes chrX 13547052 intergenic not near genes chrX 13547110 intergenic not near genes chrX_7_13545001 chrX_13545001 RAL-705 1893 chrX 13935517 13935526 chrX 13935600 13935608 4 82 2.5 3.5 3.0 1.0 91 chrX 13935517 intron mamo - chrX 13935562 intron mamo - chrX 13935608 intron mamo - chrX_4_13935001 chrX_13935001 RAL-705 1894 chrX 13937985 13938000 chrX 13941256 13941271 I-element 4 3271 4.5 4.5 4.5 0.7 3286 chrX 13937985 intron mamo - chrX 13939628 intron mamo - chrX 13941271 intron mamo - chrX_4_13935001 chrX_13935001 RAL-705 1895 chrX 13943279 13943289 chrX 13943370 13943380 4 91 0.0 2.0 1.0 2.0 101 chrX 13943279 intron mamo - chrX 13943330 intron mamo - chrX 13943380 intron mamo - chrX_4_13940001 chrX_13940001 RAL-705 1896 chrX 13975873 13975905 chrX 13975950 13975982 11 77 0.0 3.5 1.8 3.9 109 chrX 13975873 intron mamo - chrX 13975928 intron mamo - chrX 13975982 intron mamo - chrX_11_13975001 chrX_13975001 RAL-705 1897 chrX 14105021 14105054 chrX 14114171 14114205 roo 8 9151 1.0 2.0 1.5 3.2 9184 chrX 14105021 intergenic not near genes chrX 14109613 intergenic not near genes chrX 14114205 5` UTR CR44657 + chrX_8_14105001 chrX_14105001 RAL-705 1898 chrX 14131486 14131522 chrX 14131567 14131603 13 81 1.0 1.5 1.2 5.9 117 chrX 14131486 intergenic not near genes chrX 14131544 intergenic not near genes chrX 14131603 intergenic not near genes chrX_13_14130001 chrX_14130001 RAL-705 1899 chrX 14300814 14300832 chrX 14300892 14300910 6 78 6.0 3.5 4.8 1.0 96 chrX 14300814 intergenic not near genes chrX 14300862 intergenic not near genes chrX 14300910 intergenic not near genes chrX_6_14300001 chrX_14300001 RAL-705 1900 chrX 14301346 14301368 chrX 14301439 14301462 4 94 1.0 1.0 1.0 2.0 116 chrX 14301346 intergenic not near genes chrX 14301404 intergenic not near genes chrX 14301462 intergenic not near genes chrX_4_14300001 chrX_14300001 RAL-705 1901 chrX 14312774 14312804 chrX 14312855 14312885 8 81 2.0 0.0 1.0 4.0 111 chrX 14312774 intergenic not near genes chrX 14312830 intergenic not near genes chrX 14312885 intergenic not near genes chrX_8_14310001 chrX_14310001 RAL-705 1902 chrX 14331769 14331793 chrX 14332102 14332127 4 332 1.0 2.0 1.5 1.6 358 chrX 14331769 intron dpr8 + chrX 14331948 intron dpr8 + chrX 14332127 intron dpr8 + chrX_4_14330001 chrX_14330001 RAL-705 1903 chrX 14353437 14353468 chrX 14353519 14353551 8 83 1.0 1.0 1.0 4.0 114 chrX 14353437 intron dpr8 + chrX 14353494 intron dpr8 + chrX 14353551 intron dpr8 + chrX_8_14350001 chrX_14350001 RAL-705 1904 chrX 14405017 14405022 chrX 14405094 14405100 4 78 4.0 0.5 2.2 1.2 83 chrX 14405017 intron dpr8 + chrX 14405058 intron dpr8 + chrX 14405100 intron dpr8 + chrX_4_14405001 chrX_14405001 RAL-705 1905 chrX 14405276 14405293 chrX 14406047 14406064 5 771 0.5 3.0 1.8 1.8 788 chrX 14405276 intron dpr8 + chrX 14405670 intron dpr8 + chrX 14406064 intron dpr8 + chrX_5_14405001 chrX_14405001 RAL-705 1906 chrX 14467130 14467142 chrX 14467226 14467238 4 94 1.0 1.5 1.2 1.8 108 chrX 14467130 intergenic not near genes chrX 14467184 intergenic not near genes chrX 14467238 intergenic not near genes chrX_4_14465001 chrX_14465001 RAL-705 1907 chrX 14500512 14500524 chrX 14500613 14500625 4 101 0.5 2.5 1.5 1.6 113 chrX 14500512 intergenic not near genes chrX 14500568 intergenic not near genes chrX 14500625 intergenic not near genes chrX_4_14500001 chrX_14500001 RAL-705 1908 chrX 14531357 14531383 chrX 14531446 14531466 6 87 3.0 0.0 1.5 2.4 109 chrX 14531357 intergenic not near genes chrX 14531412 intergenic not near genes chrX 14531466 intergenic not near genes chrX_6_14530001 chrX_14530001 RAL-705 1909 chrX 14588925 14588935 chrX 14589053 14589063 4 128 1.0 4.5 2.8 1.1 138 chrX 14588925 intron CG9413 - chrX 14588994 intron CG9413 - chrX 14589063 intron CG9413 - chrX_4_14585001 chrX_14585001 RAL-705 1910 chrX 14593804 14593812 chrX 14593886 14593894 4 82 2.5 2.0 2.2 1.2 90 chrX 14593804 intron CG9413 - chrX 14593849 intron CG9413 - chrX 14593894 intron CG9413 - chrX_4_14590001 chrX_14590001 RAL-705 1911 chrX 14601289 14601316 chrX 14601373 14601400 4 84 3.0 2.5 2.8 1.1 111 chrX 14601289 intron CG9413 - chrX 14601344 intron CG9413 - chrX 14601400 intron CG9413 - chrX_4_14600001 chrX_14600001 RAL-705 1912 chrX 14636462 14636476 chrX 14641903 14641917 I-element 10 5441 3.5 2.5 3.0 2.5 5455 chrX 14636462 intron NetA - chrX 14639190 intron NetA - chrX 14641917 intron NetA - chrX_10_14635001 chrX_14635001 RAL-705 1913 chrX 14649329 14649340 chrX 14649403 14649416 7 75 0.5 6.5 3.5 1.6 87 chrX 14649329 intron NetA - chrX 14649372 intron NetA - chrX 14649416 intron NetA - chrX_7_14645001 chrX_14645001 RAL-705 1914 chrX 14774984 14775012 chrX 14775061 14775088 4 76 1.5 1.5 1.5 1.6 104 chrX 14774984 intergenic CG5334 + chrX 14775036 intergenic CG5334 + chrX 14775088 intergenic CG5334 + chrX_4_14775001 chrX_14775001 RAL-705 1915 chrX 14778026 14778061 chrX 14782823 14782858 Doc 6 4797 2.5 1.5 2.0 2.0 4832 chrX 14778026 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782858 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-705 1916 chrX 14806758 14806789 chrX 14806846 14806877 4 88 0.5 0.0 0.2 3.3 119 chrX 14806758 intron rut - chrX 14806818 intron rut - chrX 14806877 intron rut - chrX_4_14805001 chrX_14805001 RAL-705 1917 chrX 14861931 14861956 chrX 14862145 14862170 6 214 11.0 14.0 12.5 0.4 239 chrX 14861931 intron Flo2 + chrX 14862050 intron Flo2 + chrX 14862170 intron Flo2 + chrX_6_14860001 chrX_14860001 RAL-705 1918 chrX 14903325 14903349 chrX 14903405 14903430 10 81 1.0 3.5 2.2 3.1 105 chrX 14903325 intron,intron Flo2 +,CG9512 - chrX 14903378 intron,intron Flo2 +,CG9512 - chrX 14903430 intron,intron Flo2 +,CG9512 - chrX_10_14900001 chrX_14900001 RAL-705 1919 chrX 14936857 14936888 chrX 14946114 14946145 roo 10 9257 1.5 4.5 3.0 2.5 9288 chrX 14936857 intron pdgy - chrX 14941501 intron pdgy - chrX 14946145 intron pdgy - chrX_10_14940001 chrX_14940001 RAL-705 1920 chrX 15116901 15116925 chrX 15117018 15117042 7 117 3.0 2.0 2.5 2.0 141 chrX 15116901 intergenic Cyp4s3 - chrX 15116972 intergenic Cyp4s3 - chrX 15117042 intergenic Cyp4s3 - chrX_7_15115001 chrX_15115001 RAL-705 1921 chrX 15202067 15202094 chrX 15202173 15202200 7 106 1.5 2.5 2.0 2.3 133 chrX 15202067 intergenic not near genes chrX 15202134 intergenic not near genes chrX 15202200 intergenic not near genes chrX_7_15200001 chrX_15200001 RAL-705 1922 chrX 15413048 15413083 chrX 15417350 15417385 Juan 8 4302 4.0 0.0 2.0 2.7 4337 chrX 15413048 intron Cngl - chrX 15415216 intron Cngl - chrX 15417385 intron Cngl - chrX_8_15415001 chrX_15415001 RAL-705 1923 chrX 15421920 15421952 chrX 15423431 15423463 pogo 8 1511 1.5 2.0 1.8 2.9 1543 chrX 15421920 intron Cngl - chrX 15422692 intron Cngl - chrX 15423463 intron Cngl - chrX_8_15420001 chrX_15420001 RAL-705 1924 chrX 15435698 15435704 chrX 15436130 15436137 rover 5 433 2.5 5.5 4.0 1.0 439 chrX 15435698 intron Cngl - chrX 15435918 intron Cngl - chrX 15436137 intron Cngl - chrX_5_15435001 chrX_15435001 RAL-705 1925 chrX 15543269 15543293 chrX 15543350 15543374 7 81 3.5 2.0 2.8 1.8 105 chrX 15543269 intron Ac13E - chrX 15543322 intron Ac13E - chrX 15543374 intron Ac13E - chrX_7_15540001 chrX_15540001 RAL-705 1926 chrX 15585736 15585765 chrX 15585820 15585847 9 84 2.5 2.5 2.5 2.6 111 chrX 15585736 3` UTR CG9220 - chrX 15585792 3` UTR CG9220 - chrX 15585847 3` UTR CG9220 - chrX_9_15585001 chrX_15585001 RAL-705 1927 chrX 15678050 15678067 chrX 15678127 15678144 5 77 0.5 1.0 0.8 2.8 94 chrX 15678050 intergenic CG12708 + chrX 15678097 intergenic CG12708 + chrX 15678144 intergenic CG12708 + chrX_5_15675001 chrX_15675001 RAL-705 1928 chrX 15681395 15681424 chrX 15681477 15681506 5 82 4.0 1.0 2.5 1.4 111 chrX 15681395 intergenic not near genes chrX 15681450 intergenic not near genes chrX 15681506 intergenic not near genes chrX_5_15680001 chrX_15680001 RAL-705 1929 chrX 15740891 15740913 chrX 15741137 15741158 6 246 1.5 1.5 1.5 2.4 267 chrX 15740891 intergenic CG8944 -,CG8206 + chrX 15741024 intergenic CG8944 - chrX 15741158 intergenic CG8944 - chrX_6_15740001 chrX_15740001 RAL-705 1930 chrX 16329437 16329445 chrX 16329519 16329528 4 82 0.0 6.0 3.0 1.0 91 chrX 16329437 intron CG9919 - chrX 16329482 intron CG9919 - chrX 16329528 exon CG9919 - chrX_4_16325001 chrX_16325001 RAL-705 1931 chrX 16492648 16492678 chrX 16498225 16498255 mdg3 8 5577 2.5 2.5 2.5 2.3 5607 chrX 16492648 intron para - chrX 16495452 intron para - chrX 16498255 intron para - chrX_8_16495001 chrX_16495001 RAL-705 1932 chrX 16570899 16570904 chrX 16570977 16570984 4 80 2.0 2.0 2.0 1.3 85 chrX 16570899 intron CanA-14F - chrX 16570942 intron CanA-14F - chrX 16570984 intron CanA-14F - chrX_4_16570001 chrX_16570001 RAL-705 1933 chrX 16906647 16906673 chrX 16906734 16906760 6 87 2.5 1.5 2.0 2.0 113 chrX 16906647 intron CR44754 - chrX 16906704 intron CR44754 - chrX 16906760 intron CR44754 - chrX_6_16905001 chrX_16905001 RAL-705 1934 chrX 16936007 16936037 chrX 16936424 16936455 jockey 5 418 2.0 2.0 2.0 1.7 448 chrX 16936007 intron CG4928 + chrX 16936231 intron CG4928 + chrX 16936455 intron CG4928 + chrX_5_16935001 chrX_16935001 RAL-705 1935 chrX 16951323 16951350 chrX 16951402 16951430 6 80 1.5 2.0 1.8 2.1 107 chrX 16951323 exon RhoGAP15B + chrX 16951376 exon RhoGAP15B + chrX 16951430 exon RhoGAP15B + chrX_6_16950001 chrX_16950001 RAL-705 1936 chrX 16983076 16983076 chrX 19404963 19404965 4 2421888 12.0 12.0 12.0 0.3 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-705 1937 chrX 17006357 17006389 chrX 17006746 17006778 5 389 0.5 0.5 0.5 3.3 421 chrX 17006357 intron CG45002 - chrX 17006568 intron CG45002 - chrX 17006778 intron CG45002 - chrX_5_17005001 chrX_17005001 RAL-705 1938 chrX 17011966 17011997 chrX 17012049 17012080 7 83 3.0 3.0 3.0 1.8 114 chrX 17011966 intron CG45002 - chrX 17012023 intron CG45002 - chrX 17012080 intron CG45002 - chrX_7_17010001 chrX_17010001 RAL-705 1939 chrX 17089601 17089632 chrX 17089727 17089758 11 126 2.0 1.5 1.8 3.9 157 chrX 17089601 intergenic not near genes chrX 17089680 intergenic not near genes chrX 17089758 intergenic not near genes chrX_11_17085001 chrX_17085001 RAL-705 1940 chrX 17195206 17195231 chrX 17200292 17200317 flea 5 5086 1.5 0.5 1.0 2.5 5111 chrX 17195206 3` UTR baz + chrX 17197762 3` UTR baz + chrX 17200317 3` UTR baz + chrX_5_17195001 chrX_17195001 RAL-705 1941 chrX 17290065 17290096 chrX 17290141 17290172 5 76 1.0 2.0 1.5 2.0 107 chrX 17290065 intron,intron CG5445 +,Fim - chrX 17290118 intron,intron CG5445 +,Fim - chrX 17290172 intron,intron CG5445 +,Fim - chrX_5_17290001 chrX_17290001 RAL-705 1942 chrX 17316378 17316394 chrX 17316462 17316478 5 84 2.5 0.0 1.2 2.3 100 chrX 17316378 intron B-H2 + chrX 17316428 intron B-H2 + chrX 17316478 intron B-H2 + chrX_5_17315001 chrX_17315001 RAL-705 1943 chrX 17352595 17352620 chrX 17352698 17352723 10 103 0.0 3.5 1.8 3.6 128 chrX 17352595 intergenic not near genes chrX 17352659 intergenic not near genes chrX 17352723 intergenic not near genes chrX_10_17350001 chrX_17350001 RAL-705 1944 chrX 17502353 17502367 chrX 17502433 17502447 4 80 3.5 2.0 2.8 1.1 94 chrX 17502353 intron CG43658 - chrX 17502400 intron CG43658 - chrX 17502447 intron CG43658 - chrX_4_17500001 chrX_17500001 RAL-705 1945 chrX 17545002 17545038 chrX 17545084 17545120 6 82 2.0 0.5 1.2 2.7 118 chrX 17545002 intron CG43658 - chrX 17545061 intron CG43658 - chrX 17545120 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-705 1946 chrX 17680888 17680922 chrX 17680965 17680998 15 77 2.0 3.5 2.8 3.9 110 chrX 17680888 intron chas - chrX 17680943 intron chas - chrX 17680998 intron chas - chrX_15_17680001 chrX_17680001 RAL-705 1947 chrX 17792956 17792977 chrX 17796254 17796275 flea 4 3298 5.0 0.5 2.8 1.1 3319 chrX 17792956 intron OdsH + chrX 17794616 intron OdsH + chrX 17796275 intron OdsH + chrX_4_17790001 chrX_17790001 RAL-705 1948 chrX 17911866 17911878 chrX 17911954 17911966 6 88 0.0 2.0 1.0 3.0 100 chrX 17911866 intron CG6847 + chrX 17911916 intron CG6847 + chrX 17911966 intron CG6847 + chrX_6_17910001 chrX_17910001 RAL-705 1949 chrX 17968904 17968926 chrX 17969022 17969044 4 118 0.5 3.0 1.8 1.4 140 chrX 17968904 intron Sh - chrX 17968974 intron Sh - chrX 17969044 intron Sh - chrX_4_17965001 chrX_17965001 RAL-705 1950 chrX 18093662 18093669 chrX 18093869 18093876 7 207 3.0 4.5 3.8 1.5 214 chrX 18093662 5` UTR RhoGAP16F + chrX 18093769 5` UTR RhoGAP16F + chrX 18093876 5` UTR RhoGAP16F + chrX_7_18090001 chrX_18090001 RAL-705 1951 chrX 18194065 18194091 chrX 18194600 18194626 BS 10 535 4.0 4.5 4.2 1.9 561 chrX 18194065 intron Frq2 + chrX 18194346 intron Frq2 + chrX 18194626 intron Frq2 + chrX_10_18190001 chrX_18190001 RAL-705 1952 chrX 18281552 18281571 chrX 18281634 18281653 5 82 2.0 0.5 1.2 2.3 101 chrX 18281552 intron upd3 + chrX 18281602 intron upd3 + chrX 18281653 intron upd3 + chrX_5_18280001 chrX_18280001 RAL-705 1953 chrX 18332761 18332767 chrX 18332835 18332849 4 80 1.5 5.5 3.5 0.9 88 chrX 18332761 intron CG6123 - chrX 18332805 intron CG6123 - chrX 18332849 intron CG6123 - chrX_4_18330001 chrX_18330001 RAL-705 1954 chrX 18429497 18429519 chrX 18434807 18434830 Transpac 4 5310 1.0 1.5 1.2 1.8 5333 chrX 18429497 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434830 intergenic not near genes chrX_4_18430001 chrX_18430001 RAL-705 1955 chrX 18483759 18483792 chrX 18483848 18483881 4 89 2.5 1.0 1.8 1.4 122 chrX 18483759 5` UTR Hayan - chrX 18483820 intergenic Hayan - chrX 18483881 intergenic Hayan - chrX_4_18480001 chrX_18480001 RAL-705 1956 chrX 18555395 18555412 chrX 18556915 18556933 transib2 5 1521 0.0 4.5 2.2 1.6 1538 chrX 18555395 intron Bx + chrX 18556164 intron Bx + chrX 18556933 intron Bx + chrX_5_18555001 chrX_18555001 RAL-705 1957 chrX 18574794 18574825 chrX 18574874 18574905 7 80 1.5 1.0 1.2 3.2 111 chrX 18574794 intergenic not near genes chrX 18574850 intergenic not near genes chrX 18574905 intergenic not near genes chrX_7_18570001 chrX_18570001 RAL-705 1958 chrX 18645016 18645046 chrX 18645114 18645144 9 98 2.0 3.0 2.5 2.6 128 chrX 18645016 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645144 intron Rip11 - chrX_9_18645001 chrX_18645001 RAL-705 1959 chrX 18698847 18698878 chrX 18698964 18698995 5 117 3.0 2.0 2.5 1.4 148 chrX 18698847 intergenic not near genes chrX 18698921 intergenic not near genes chrX 18698995 intergenic not near genes chrX_5_18695001 chrX_18695001 RAL-705 1960 chrX 18717545 18717569 chrX 18717898 18717922 9 353 3.5 2.5 3.0 2.2 377 chrX 18717545 intron CCKLR-17D1 - chrX 18717734 intron CCKLR-17D1 - chrX 18717922 intron CCKLR-17D1 - chrX_9_18715001 chrX_18715001 RAL-705 1961 chrX 19014361 19014393 chrX 19014437 19014472 7 78 2.0 2.5 2.2 2.2 111 chrX 19014361 intron CG43759 + chrX 19014416 intron CG43759 + chrX 19014472 intron CG43759 + chrX_7_19010001 chrX_19010001 RAL-705 1962 chrX 19020593 19020602 chrX 19020671 19020680 5 78 3.5 3.5 3.5 1.1 87 chrX 19020593 intron CG43759 + chrX 19020636 intron CG43759 + chrX 19020680 intron CG43759 + chrX_5_19020001 chrX_19020001 RAL-705 1963 chrX 19136554 19136584 chrX 19143474 19143503 412 5 6920 1.5 2.5 2.0 1.7 6949 chrX 19136554 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143503 3` UTR RhoGAP18B - chrX_5_19140001 chrX_19140001 RAL-705 1964 chrX 19176215 19176237 chrX 19176299 19176320 4 84 4.5 6.0 5.2 0.6 105 chrX 19176215 3` UTR CG7556 - chrX 19176268 3` UTR CG7556 - chrX 19176320 3` UTR CG7556 - chrX_4_19175001 chrX_19175001 RAL-705 1965 chrX 13057298 13057300 chrX 19242812 19242814 16 6185514 10.5 4.5 7.5 1.9 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_16_16150001 chrX_16150001 RAL-705 1966 chrX 19380158 19380182 chrX 19380399 19380423 pogo 6 241 3.5 1.0 2.2 1.9 265 chrX 19380158 intron kek5 + chrX 19380290 intron kek5 + chrX 19380423 intron kek5 + chrX_6_19380001 chrX_19380001 RAL-705 1967 chrX 19417020 19417056 chrX 19417342 19417379 5 322 1.0 3.0 2.0 1.7 359 chrX 19417020 intron kek5 + chrX 19417200 intron kek5 + chrX 19417379 intron kek5 + chrX_5_19415001 chrX_19415001 RAL-705 1968 chrX 19447092 19447107 chrX 19447351 19447366 5 259 3.0 1.0 2.0 1.7 274 chrX 19447092 intron kek5 + chrX 19447229 intron kek5 + chrX 19447366 intron kek5 + chrX_5_19445001 chrX_19445001 RAL-705 1969 chrX 19472122 19472151 chrX 19472692 19472721 jockey 5 570 1.5 1.5 1.5 2.0 599 chrX 19472122 intergenic kek5 + chrX 19472422 intergenic not near genes chrX 19472721 intergenic not near genes chrX_5_19470001 chrX_19470001 RAL-705 1970 chrX 19662034 19662052 chrX 19662257 19662275 5 223 4.0 1.0 2.5 1.4 241 chrX 19662034 intron CG14223 - chrX 19662154 intron CG14223 - chrX 19662275 intron CG14223 - chrX_5_19660001 chrX_19660001 RAL-705 1971 chrX 19840215 19840222 chrX 19840309 19840316 5 94 2.0 2.0 2.0 1.7 101 chrX 19840215 intron pico - chrX 19840266 intron pico - chrX 19840316 intron pico - chrX_5_19840001 chrX_19840001 RAL-705 1972 chrX 19897379 19897408 chrX 19897456 19897485 12 77 3.5 1.5 2.5 3.4 106 chrX 19897379 intron Hers + chrX 19897432 intron Hers + chrX 19897485 intron Hers + chrX_12_19895001 chrX_19895001 RAL-705 1973 chrX 19983863 19983897 chrX 19983943 19983976 6 80 0.5 0.0 0.2 5.0 113 chrX 19983863 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983976 intergenic not near genes chrX_6_19980001 chrX_19980001 RAL-705 1974 chrX 19992419 19992433 chrX 19992495 19992509 4 76 4.0 5.0 4.5 0.7 90 chrX 19992419 intergenic not near genes chrX 19992464 intergenic not near genes chrX 19992509 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-705 1975 chrX 20041534 20041567 chrX 20041614 20041647 5 80 2.0 2.0 2.0 1.7 113 chrX 20041534 intron Dop2R - chrX 20041590 intron Dop2R - chrX 20041647 intron Dop2R - chrX_5_20040001 chrX_20040001 RAL-705 1976 chrX 20126888 20126906 chrX 20126967 20126984 4 79 3.0 2.0 2.5 1.1 96 chrX 20126888 intergenic not near genes chrX 20126936 intergenic not near genes chrX 20126984 intergenic not near genes chrX_4_20125001 chrX_20125001 RAL-705 1977 chrX 20144294 20144315 chrX 20144374 20144394 7 80 0.0 5.0 2.5 2.0 100 chrX 20144294 intergenic not near genes chrX 20144344 intergenic not near genes chrX 20144394 intergenic not near genes chrX_7_20140001 chrX_20140001 RAL-705 1978 chrX 20312882 20312910 chrX 20312959 20312986 5 77 1.5 1.5 1.5 2.0 104 chrX 20312882 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20312986 intron CG1504 - chrX_5_20310001 chrX_20310001 RAL-705 1979 chrX 20374105 20374125 chrX 20374181 20374201 4 76 0.5 3.5 2.0 1.3 96 chrX 20374105 intergenic not near genes chrX 20374153 intergenic not near genes chrX 20374201 intergenic not near genes chrX_4_20370001 chrX_20370001 RAL-705 1980 chrX 20377326 20377351 chrX 20378793 20378818 hobo 8 1467 1.5 4.0 2.8 2.1 1492 chrX 20377326 intergenic not near genes chrX 20378072 intergenic not near genes chrX 20378818 intergenic not near genes chrX_8_20375001 chrX_20375001 RAL-705 1981 chrX 20385622 20385626 chrX 20385882 20385886 4 260 1.5 0.0 0.8 2.2 264 chrX 20385622 intergenic not near genes chrX 20385754 intergenic not near genes chrX 20385886 intergenic not near genes chrX_4_20385001 chrX_20385001 RAL-705 1982 chrX 20426181 20426212 chrX 20428375 20428406 7 2194 36.0 32.0 34.0 0.2 2225 chrX 20426181 exon cactin + chrX 20427294 intergenic CG11710 -,CG15456 - chrX 20428406 exon CG11710 - chrX_7_20425001 chrX_20425001 RAL-705 1983 chrX 20518786 20518796 chrX 20518865 20518875 4 79 0.5 3.5 2.0 1.3 89 chrX 20518786 intron Tak1 - chrX 20518830 intron Tak1 - chrX 20518875 intron Tak1 - chrX_4_20515001 chrX_20515001 RAL-705 1984 chrX 20665060 20665089 chrX 20665146 20665174 12 86 1.5 2.0 1.8 4.3 114 chrX 20665060 intron CG1835 + chrX 20665117 intron CG1835 + chrX 20665174 intron CG1835 + chrX_12_20665001 chrX_20665001 RAL-705 1985 chrX 20780230 20780237 chrX 20780454 20780462 4 225 1.5 0.5 1.0 2.0 232 chrX 20780230 intron,3` UTR shakB -,CG32507 - chrX 20780346 intron,3` UTR shakB -,CG32507 - chrX 20780462 intron,3` UTR shakB -,CG32507 - chrX_4_20780001 chrX_20780001 RAL-705 1986 chrX 20791557 20791572 chrX 20791657 20791672 10 100 1.5 0.5 1.0 5.0 115 chrX 20791557 intron shakB - chrX 20791614 intron shakB - chrX 20791672 intron shakB - chrX_10_20790001 chrX_20790001 RAL-705 1987 chrX 20836746 20836754 chrX 20844343 20844356 roo 4 7600 2.0 3.5 2.8 1.1 7610 chrX 20836746 intron shakB - chrX 20840551 intron shakB - chrX 20844356 intron shakB - chrX_4_20840001 chrX_20840001 RAL-705 1988 chrX 20940720 20940751 chrX 20942188 20942220 hobo 12 1469 4.5 4.0 4.2 2.3 1500 chrX 20940720 intergenic not near genes chrX 20941470 intergenic not near genes chrX 20942220 intergenic not near genes chrX_12_20940001 chrX_20940001 RAL-705 1989 chrX 21022258 21022278 chrX 21022340 21022360 7 82 12.0 8.5 10.2 0.6 102 chrX 21022258 intergenic not near genes chrX 21022309 intergenic not near genes chrX 21022360 intergenic not near genes chrX_7_21020001 chrX_21020001 RAL-705 1990 chrX 21029163 21029180 chrX 21029377 21029395 5 216 0.0 2.5 1.2 2.3 232 chrX 21029163 3` UTR CG1529 - chrX 21029279 3` UTR CG1529 - chrX 21029395 3` UTR CG1529 - chrX_5_21025001 chrX_21025001 RAL-705 1991 chrX 21055690 21055724 chrX 21055766 21055800 7 76 1.0 1.0 1.0 3.5 110 chrX 21055690 intron bves + chrX 21055745 intron bves + chrX 21055800 intron bves + chrX_7_21055001 chrX_21055001 RAL-705 1992 chrX 21076331 21076352 chrX 21076407 21076431 5 78 1.5 1.0 1.2 2.3 100 chrX 21076331 intron bves + chrX 21076381 intron bves + chrX 21076431 intron bves + chrX_5_21075001 chrX_21075001 RAL-705 1993 chrX 21086132 21086161 chrX 21087161 21087190 jockey 6 1028 1.0 0.5 0.8 3.3 1058 chrX 21086132 intergenic not near genes chrX 21086661 intergenic not near genes chrX 21087190 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-705 1994 chrX 21088041 21088072 chrX 21088173 21088203 6 131 2.0 1.0 1.5 2.4 162 chrX 21088041 intergenic not near genes chrX 21088122 intergenic not near genes chrX 21088203 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-705 1995 chrX 21254654 21254667 chrX 21255570 21255583 hopper2 6 916 3.5 0.0 1.8 2.1 929 chrX 21254654 intron CG32521 - chrX 21255118 intron CG32521 - chrX 21255583 intron CG32521 - chrX_6_21255001 chrX_21255001 RAL-705 1996 chrX 21328120 21328137 chrX 21328231 21328248 4 111 2.5 0.0 1.2 1.8 128 chrX 21328120 3` UTR CG1486 + chrX 21328184 intergenic CG1486 +,tty - chrX 21328248 intergenic CG1486 +,tty - chrX_4_21325001 chrX_21325001 RAL-705 1997 chrX 21419702 21419734 chrX 21419791 21419816 7 88 1.0 3.5 2.2 2.2 114 chrX 21419702 intergenic not near genes chrX 21419759 intergenic not near genes chrX 21419816 intergenic not near genes chrX_7_21415001 chrX_21415001 RAL-705 1998 chrX 21458693 21458727 chrX 21464129 21464163 Ivk 9 5436 5.5 0.5 3.0 2.2 5470 chrX 21458693 intergenic not near genes chrX 21461428 intergenic not near genes chrX 21464163 intergenic not near genes chrX_9_21460001 chrX_21460001 RAL-705 1999 chrX 21576437 21576449 chrX 21576758 21576770 7 322 2.5 3.0 2.8 1.8 333 chrX 21576437 intergenic not near genes chrX 21576604 intergenic not near genes chrX 21576770 intergenic not near genes chrX_7_21575001 chrX_21575001 RAL-705 2000 chrX 22448274 22448279 chrX 22448413 22448417 5 139 2.0 2.0 2.0 1.7 143 chrX 22448274 intron CG14615 - chrX 22448346 intron CG14615 - chrX 22448417 intron CG14615 - chrX_5_22445001 chrX_22445001 RAL-705 2001 chrX 22677292 22677328 chrX 22677501 22677537 9 209 0.0 0.0 0.0 9.0 245 chrX 22677292 intron CR44997 + chrX 22677414 intron CR44997 + chrX 22677537 intron CR44997 + chrX_9_22675001 chrX_22675001 RAL-705 2002 chrX 22697499 22697524 chrX 22701794 22701821 Juan 7 4297 3.0 1.0 2.0 2.3 4322 chrX 22697499 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701821 intron CR44997 + chrX_7_22695001 chrX_22695001 RAL-705 2003 chrX 22785611 22785642 chrX 22785702 22785733 8 90 1.0 4.0 2.5 2.3 122 chrX 22785611 intron CR44997 + chrX 22785672 intron CR44997 + chrX 22785733 intron CR44997 + chrX_8_22785001 chrX_22785001 RAL-705 2004 chrX 22820970 22820976 chrX 22821157 22821164 4 188 5.0 3.5 4.2 0.8 194 chrX 22820970 intergenic not near genes chrX 22821067 intergenic not near genes chrX 22821164 intergenic not near genes chrX_4_22820001 chrX_22820001 RAL-705 2005 chrX 22867979 22868006 chrX 22868093 22868120 10 113 1.5 0.0 0.8 5.6 141 chrX 22867979 exon CG42346 + chrX 22868050 intron CG42346 + chrX 22868120 intron CG42346 + chrX_10_22865001 chrX_22865001 RAL-705 2006 chrX 22996310 22996338 chrX 23003544 23003572 roo 8 7234 2.5 2.5 2.5 2.3 7262 chrX 22996310 intron,intron stnA -,stnB - chrX 22999941 intron,intron stnA -,stnB - chrX 23003572 intron,intron stnA -,stnB - chrX_8_22995001 chrX_22995001 RAL-705 2007 chrY 975597 975805 chrY 975713 975884 4 131 51.0 45.5 48.2 0.1 287 chrY 975597 intergenic not near genes chrY 975740 intergenic not near genes chrY 975884 intergenic not near genes chrY_4_975001 chrY_975001 RAL-705 2008 chrY 1419916 1419929 chrY 1420170 1420183 invader2 5 254 3.5 7.0 5.2 0.8 267 chrY 1419916 intergenic not near genes chrY 1420050 intergenic not near genes chrY 1420183 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-705