SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	748197	748217	jockey	35	15	6	20	'4-2	59.16	8.7	0.6	intergenic	not near genes	chr2L_6_745001	chr2L_745001	0.67	RAL-646
2	chr2L	1088375	1088422	diver	32	225	6	47	'3-3	67.48	0.6	3.8	intron	CG4629 -	chr2L_6_1085001	chr2L_1085001	0.50	RAL-646
3	chr2L	1339532	1339604	mdg1	7039	7451	9	72	'5-4	65.34	1.7	3.3	intergenic	not near genes	chr2L_9_1335001	chr2L_1335001	0.56	RAL-646
4	chr2L	1489130	1489191	Burdock	234	6135	5	61	'2-3	72.31	2.7	1.4	intergenic	not near genes	chr2L_5_1485001	chr2L_1485001	0.40	RAL-646
5	chr2L	2178749	2178776	P-element	2884	32	5	27	'2-3	49.16	5.7	0.7	5` UTR	aop -	chr2L_5_2175001	chr2L_2175001	0.40	RAL-646
6	chr2L	2291439	2291509	roo	7	409	8	70	'4-4	66.42	3.4	1.8	intergenic	not near genes	chr2L_8_2290001	chr2L_2290001	0.50	RAL-646
7	chr2L	2909561	2909609	pogo	2097	7	4	48	'1-3	66.03	3.2	1.0	intron	lilli +	chr2L_4_2905001	chr2L_2905001	0.25	RAL-646
8	chr2L	3263883	3263952	blood	1	378	8	69	'5-3	59.25	2.9	2.1	intergenic	CR45706 -	chr2L_8_3260001	chr2L_3260001	0.62	RAL-646
9	chr2L	4106411	4106440	jockey	16	6	5	29	'2-3	64.09	1.4	2.1	intron	ed +	chr2L_5_4105001	chr2L_4105001	0.40	RAL-646
10	chr2L	4887113	4887132	roo	32	8677	4	19	'3-1	69.12	1.1	1.9	intergenic	not near genes	chr2L_4_4885001	chr2L_4885001	0.75	RAL-646
11	chr2L	5690700	5690768	mdg1	408	7038	4	68	'3-1	67.91	2.5	1.1	intron,3` UTR	CR44819 +,CR44820 -	chr2L_4_5690001	chr2L_5690001	0.75	RAL-646
12	chr2L	5724314	5724360	1360	3378	22	4	46	'2-2	64.27	0.0	4.0	intergenic	CG11030 +,sip1 +	chr2L_4_5720001	chr2L_5720001	0.50	RAL-646
13	chr2L	5749017	5749089	HMS-Beagle	5	242	7	72	'4-3	64.96	2.5	2.0	intron	CG11030 +	chr2L_7_5745001	chr2L_5745001	0.57	RAL-646
14	chr2L	5856009	5856081	opus	10	498	9	72	'1-8	64.13	3.6	2.0	intron	TrissinR +	chr2L_9_5855001	chr2L_5855001	0.11	RAL-646
15	chr2L	6311246	6311264	hopper	1414	7	4	18	'3-1	62.23	4.8	0.7	intron	Ddr +	chr2L_4_6310001	chr2L_6310001	0.75	RAL-646
16	chr2L	7023356	7023416	1360	3373	3387	20	60	'8-12	63.10	6.1	2.8	intron	ade3 -	chr2L_20_7020001	chr2L_7020001	0.40	RAL-646
17	chr2L	7284960	7284989	Doc	11	39	7	29	'1-6	67.99	3.2	1.7	intergenic	not near genes	chr2L_7_7280001	chr2L_7280001	0.14	RAL-646
18	chr2L	7362474	7362538	Burdock	244	6143	5	64	'4-1	59.17	3.8	1.0	intergenic	not near genes	chr2L_5_7360001	chr2L_7360001	0.80	RAL-646
19	chr2L	7420859	7420879	1360	3381	3378	10	20	'6-4	66.16	6.3	1.4	intron	chm +	chr2L_10_7420001	chr2L_7420001	0.60	RAL-646
20	chr2L	7420896	7420912	P-element	4	1	8	16	'4-4	40.86	7.3	1.0	intron	chm +	chr2L_8_7420001	chr2L_7420001	0.50	RAL-646
21	chr2L	8601910	8601945	jockey	16	4972	13	35	'4-9	63.14	4.4	2.4	intron	Sema-1a +	chr2L_13_8600001	chr2L_8600001	0.31	RAL-646
22	chr2L	9036182	9036199	jockey	4671	4693	4	17	'2-2	58.73	7.9	0.4	intergenic	not near genes	chr2L_4_9035001	chr2L_9035001	0.50	RAL-646
23	chr2L	9290611	9290679	hobo	2937	8	13	68	'5-8	65.93	5.4	2.0	intron	Ggamma30A +	chr2L_13_9290001	chr2L_9290001	0.38	RAL-646
24	chr2L	9746744	9746762	jockey	10	16	7	18	'4-3	53.98	8.0	0.8	intergenic	Nckx30C -	chr2L_7_9745001	chr2L_9745001	0.57	RAL-646
25	chr2L	9756240	9756315	opus	2	498	13	75	'3-10	68.21	3.1	3.2	intergenic	not near genes	chr2L_13_9755001	chr2L_9755001	0.23	RAL-646
26	chr2L	9800311	9800383	HMS-Beagle2	6882	7184	13	72	'12-1	64.45	2.1	4.2	intron	nAChRalpha6 -	chr2L_13_9800001	chr2L_9800001	0.92	RAL-646
27	chr2L	9882451	9882530	mdg3	5251	5495	11	79	'7-4	59.80	4.3	2.1	intron	nAChRalpha6 -	chr2L_11_9880001	chr2L_9880001	0.64	RAL-646
28	chr2L	9938134	9938157	jockey	4789	4787	4	23	'2-2	57.44	8.2	0.4	5` UTR,5` UTR	CG31712 -,CR45007 +	chr2L_4_9935001	chr2L_9935001	0.50	RAL-646
29	chr2L	10234557	10234611	opus	27	498	8	54	'1-7	67.52	2.3	2.4	intergenic	mthl15 -,eEF1delta +	chr2L_8_10230001	chr2L_10230001	0.12	RAL-646
30	chr2L	10585062	10585120	roo	23	411	17	58	'12-5	69.63	3.5	3.8	intron	Trim9 +	chr2L_17_10585001	chr2L_10585001	0.71	RAL-646
31	chr2L	11381663	11381736	blood	379	7	11	73	'9-2	62.56	2.2	3.4	intergenic	not near genes	chr2L_11_11380001	chr2L_11380001	0.82	RAL-646
32	chr2L	12511530	12511585	copia	4867	228	4	55	'2-2	69.22	1.7	1.5	intron	bun -	chr2L_4_12510001	chr2L_12510001	0.50	RAL-646
33	chr2L	12654289	12654357	297	6591	391	9	68	'4-5	73.24	2.3	2.7	intergenic	not near genes	chr2L_9_12650001	chr2L_12650001	0.44	RAL-646
34	chr2L	12748848	12748910	blood	7006	355	8	62	'4-4	67.18	2.3	2.4	intergenic	not near genes	chr2L_8_12745001	chr2L_12745001	0.50	RAL-646
35	chr2L	12858719	12858745	Transpac	4946	1	4	26	'2-2	64.19	2.1	1.3	intergenic	not near genes	chr2L_4_12855001	chr2L_12855001	0.50	RAL-646
36	chr2L	12956085	12956151	hobo	5	2934	18	66	'10-8	63.04	5.1	3.0	intergenic	not near genes	chr2L_18_12955001	chr2L_12955001	0.56	RAL-646
37	chr2L	13724251	13724311	blood	7021	7380	6	60	'4-2	62.62	4.5	1.1	intergenic	not near genes	chr2L_6_13720001	chr2L_13720001	0.67	RAL-646
38	chr2L	13887668	13887691	roo	8663	8683	6	23	'1-5	63.16	4.2	1.2	intron	CenG1A +	chr2L_6_13885001	chr2L_13885001	0.17	RAL-646
39	chr2L	14111604	14111680	Stalker2	7248	398	9	76	'3-6	58.49	3.3	2.1	intergenic	not near genes	chr2L_9_14110001	chr2L_14110001	0.33	RAL-646
40	chr2L	14140489	14140562	412	7545	5	16	73	'8-8	64.59	3.8	3.3	intron	CG17341 +	chr2L_16_14140001	chr2L_14140001	0.50	RAL-646
41	chr2L	14234130	14234182	P-element	17	2883	6	52	'4-2	44.16	5.8	0.9	intergenic	Dyrk2 -	chr2L_6_14230001	chr2L_14230001	0.67	RAL-646
42	chr2L	14713309	14713387	Max-element	2	300	6	78	'2-4	65.24	1.3	2.6	intergenic	CG15282 +,CG34165 +	chr2L_6_14710001	chr2L_14710001	0.33	RAL-646
43	chr2L	15142286	15142309	hopper	11	8	5	23	'2-3	63.22	3.9	1.0	intergenic	not near genes	chr2L_5_15140001	chr2L_15140001	0.40	RAL-646
44	chr2L	15595944	15595971	Burdock	226	6388	7	27	'2-5	64.27	1.8	2.5	intergenic	not near genes	chr2L_7_15595001	chr2L_15595001	0.29	RAL-646
45	chr2L	17156629	17156705	mdg3	5494	5253	9	76	'2-7	66.11	1.2	4.1	intron,intron	CG34106 +,beat-IIIa +	chr2L_9_17155001	chr2L_17155001	0.22	RAL-646
46	chr2L	17181003	17181077	roo	402	8664	11	74	'4-7	64.86	3.4	2.5	exon	Gr36c +	chr2L_11_17180001	chr2L_17180001	0.36	RAL-646
47	chr2L	17288651	17288732	Transpac	4918	308	9	81	'3-6	67.92	2.3	2.7	intergenic	not near genes	chr2L_9_17285001	chr2L_17285001	0.33	RAL-646
48	chr2L	17296586	17296662	hopper	1411	1414	13	76	'7-6	65.42	3.8	2.7	intergenic	not near genes	chr2L_13_17295001	chr2L_17295001	0.54	RAL-646
49	chr2L	18570488	18570555	FB	8	1	9	67	'2-7	65.04	2.0	3.0	intron	Pde11 -	chr2L_9_18570001	chr2L_18570001	0.22	RAL-646
50	chr2L	18729455	18729479	pogo	2073	2097	4	24	'2-2	64.32	1.6	1.5	intron	CG10348 -	chr2L_4_18725001	chr2L_18725001	0.50	RAL-646
51	chr2L	18907859	18907920	Transpac	310	20	15	61	'10-5	68.67	5.4	2.3	intergenic	not near genes	chr2L_15_18905001	chr2L_18905001	0.67	RAL-646
52	chr2L	18981196	18981251	pogo	2090	18	6	55	'3-3	61.87	1.3	2.6	intron	Swip-1 -	chr2L_6_18980001	chr2L_18980001	0.50	RAL-646
53	chr2L	19214977	19215022	roo	394	8685	8	45	'3-5	66.51	2.4	2.4	intergenic	not near genes	chr2L_8_19210001	chr2L_19210001	0.38	RAL-646
54	chr2L	19247874	19247954	roo	8664	409	14	80	'6-8	62.27	3.6	3.0	intergenic	not near genes	chr2L_14_19245001	chr2L_19245001	0.43	RAL-646
55	chr2L	19681026	19681059	hobo	28	2925	7	33	'5-2	69.75	2.4	2.1	intron	Lar +	chr2L_7_19680001	chr2L_19680001	0.71	RAL-646
56	chr2L	19859153	19859175	297	6587	6609	4	22	'1-3	77.34	6.3	0.5	intron	sick +	chr2L_4_19855001	chr2L_19855001	0.25	RAL-646
57	chr2L	20042453	20042473	roo	397	9040	6	20	'3-3	65.92	2.1	1.9	intron	sNPF +	chr2L_6_20040001	chr2L_20040001	0.50	RAL-646
58	chr2L	20165717	20165734	Helena	849	864	6	17	'3-3	56.13	4.5	1.1	intergenic	not near genes	chr2L_6_20165001	chr2L_20165001	0.50	RAL-646
59	chr2L	20169345	20169373	invader3	5184	16	5	28	'3-2	60.16	0.0	5.0	intergenic	not near genes	chr2L_5_20165001	chr2L_20165001	0.60	RAL-646
60	chr2L	20264335	20264404	pogo	2100	11	8	69	'4-4	66.88	2.1	2.6	5` UTR	CG17570 -	chr2L_8_20260001	chr2L_20260001	0.50	RAL-646
61	chr2L	20914172	20914241	roo	398	1	13	69	'5-8	63.36	1.5	5.2	intron,intron	CG43739 -,sky -	chr2L_13_20910001	chr2L_20910001	0.38	RAL-646
62	chr2L	21276719	21276770	1360	21	3383	5	51	'1-4	65.82	4.5	0.9	intron	CG8671 +	chr2L_5_21275001	chr2L_21275001	0.20	RAL-646
63	chr2L	22340317	22340388	HMS-Beagle2	6889	308	11	71	'8-3	60.98	2.2	3.4	intron	CG17018 +	chr2L_11_22340001	chr2L_22340001	0.73	RAL-646
64	chr2L	22718232	22718316	opus	110	497	14	84	'5-9	68.18	1.1	6.7	intron	CG40006 -	chr2L_14_22715001	chr2L_22715001	0.36	RAL-646
65	chr2L	23299982	23300000	invader4	3079	326	4	18	'3-1	55.63	2.2	1.2	intergenic	not near genes	chr2L_4_23295001	chr2L_23295001	0.75	RAL-646
66	chr2R	544799	544877	HMS-Beagle	6802	248	8	78	'5-3	62.72	3.3	1.9	intron	CG40378 +	chr2R_8_540001	chr2R_540001	0.62	RAL-646
67	chr2R	2184586	2184633	gypsy	7004	452	5	47	'2-3	66.50	1.7	1.9	intron	CG17684 -	chr2R_5_2180001	chr2R_2180001	0.40	RAL-646
68	chr2R	4976012	4976095	Transpac	310	1	6	83	'5-1	72.76	1.4	2.5	intron	Ir41a +	chr2R_6_4975001	chr2R_4975001	0.83	RAL-646
69	chr2R	5452851	5452923	copia	257	10	5	72	'3-2	61.33	2.7	1.4	intron	laccase2 +	chr2R_5_5450001	chr2R_5450001	0.60	RAL-646
70	chr2R	5485066	5485133	1360	4	7	8	67	'6-2	64.33	3.2	1.9	intron	CG30440 -	chr2R_8_5485001	chr2R_5485001	0.75	RAL-646
71	chr2R	5748897	5748962	roo	397	4	6	65	'3-3	66.01	2.6	1.7	intergenic	not near genes	chr2R_6_5745001	chr2R_5745001	0.50	RAL-646
72	chr2R	5850971	5850990	297	6584	28	4	19	'1-3	71.28	0.7	2.4	intron	dpr12 +	chr2R_4_5850001	chr2R_5850001	0.25	RAL-646
73	chr2R	6085591	6085660	P-element	6	2884	7	69	'3-4	55.06	2.8	1.8	5` UTR	Ars2 -	chr2R_7_6085001	chr2R_6085001	0.43	RAL-646
74	chr2R	6492904	6492980	copia	4866	248	7	76	'6-1	67.34	1.4	2.9	intergenic	not near genes	chr2R_7_6490001	chr2R_6490001	0.86	RAL-646
75	chr2R	6501738	6501800	P-element	2873	2886	16	62	'4-12	49.27	6.2	2.2	intergenic	jing +	chr2R_16_6500001	chr2R_6500001	0.25	RAL-646
76	chr2R	6779774	6779837	17.6	483	10	6	63	'2-4	67.70	2.3	1.8	intron,3` UTR	Epac -,Cyp6a2 -	chr2R_6_6775001	chr2R_6775001	0.33	RAL-646
77	chr2R	7153282	7153307	I-element	2	27	4	25	'1-3	60.85	1.6	1.5	intron,intron	pk +,Spn43Ab -	chr2R_4_7150001	chr2R_7150001	0.25	RAL-646
78	chr2R	7218266	7218309	mdg1	7428	7040	4	43	'2-2	67.45	3.4	0.9	intron	pk +	chr2R_4_7215001	chr2R_7215001	0.50	RAL-646
79	chr2R	7704993	7705038	mdg1	7041	409	4	45	'3-1	63.06	1.3	1.7	5` UTR	CG34216 -	chr2R_4_7700001	chr2R_7700001	0.75	RAL-646
80	chr2R	7887254	7887273	jockey	4703	4685	5	19	'4-1	55.70	2.5	1.4	intergenic	not near genes	chr2R_5_7885001	chr2R_7885001	0.80	RAL-646
81	chr2R	8086885	8086942	1360	1	6	9	57	'3-6	67.55	3.4	2.0	3` UTR	sut1 +	chr2R_9_8085001	chr2R_8085001	0.33	RAL-646
82	chr2R	8162214	8162288	pogo	2	2095	15	74	'12-3	68.32	3.7	3.2	exon	RagC-D -	chr2R_15_8160001	chr2R_8160001	0.80	RAL-646
83	chr2R	8240708	8240767	1360	3382	3376	16	59	'14-2	65.18	4.0	3.2	intergenic	pnut +	chr2R_16_8240001	chr2R_8240001	0.88	RAL-646
84	chr2R	8279986	8280064	roo	406	8663	9	78	'4-5	64.13	1.9	3.1	intergenic	not near genes	chr2R_9_8275001	chr2R_8275001	0.44	RAL-646
85	chr2R	8310859	8310914	pogo	2092	2	18	55	'4-14	63.87	4.4	3.3	3` UTR	CR44449 -	chr2R_18_8310001	chr2R_8310001	0.22	RAL-646
86	chr2R	8364770	8364843	roo	409	6	15	73	'10-5	66.14	3.6	3.3	intron,exon,5` UTR	pdm3 +,cola -,swif -	chr2R_15_8360001	chr2R_8360001	0.67	RAL-646
87	chr2R	9394534	9394595	roo	18	410	19	61	'8-11	70.89	3.9	3.9	exon	l(2)03659 +	chr2R_19_9390001	chr2R_9390001	0.42	RAL-646
88	chr2R	9440618	9440683	pogo	18	2100	12	65	'1-11	69.30	1.4	5.0	intron	ced-6 -	chr2R_12_9440001	chr2R_9440001	0.08	RAL-646
89	chr2R	9870951	9871034	roo	8662	410	6	83	'3-3	66.86	1.1	2.9	intron	cbx -	chr2R_6_9870001	chr2R_9870001	0.50	RAL-646
90	chr2R	10060520	10060579	412	487	7069	5	59	'1-4	60.72	2.6	1.4	intron	magu +	chr2R_5_10060001	chr2R_10060001	0.20	RAL-646
91	chr2R	10208675	10208709	jockey	4975	4762	5	34	'2-3	60.00	3.4	1.1	intron,intron	CG12912 -,Hr46 -	chr2R_5_10205001	chr2R_10205001	0.40	RAL-646
92	chr2R	10303890	10303962	pogo	4	2097	12	72	'8-4	68.63	2.7	3.2	intron	CAP +	chr2R_12_10300001	chr2R_10300001	0.67	RAL-646
93	chr2R	10540534	10540585	P-element	20	2882	6	51	'2-4	45.76	4.1	1.2	intron	lola -	chr2R_6_10540001	chr2R_10540001	0.33	RAL-646
94	chr2R	10542130	10542201	1360	2	6	13	71	'4-9	67.91	1.0	6.5	intron	lola -	chr2R_13_10540001	chr2R_10540001	0.31	RAL-646
95	chr2R	10764045	10764105	FB	9	6	10	60	'7-3	63.55	2.7	2.7	intron	CG33144 -	chr2R_10_10760001	chr2R_10760001	0.70	RAL-646
96	chr2R	11191042	11191105	17.6	7415	6941	7	63	'2-5	69.36	3.5	1.6	intron	shn +	chr2R_7_11190001	chr2R_11190001	0.29	RAL-646
97	chr2R	11224439	11224514	blood	1	7388	13	75	'6-7	63.11	2.4	3.8	intron	CG7737 +	chr2R_13_11220001	chr2R_11220001	0.46	RAL-646
98	chr2R	11435803	11435877	Tirant	5	394	12	74	'5-7	67.88	2.0	4.0	intergenic	CG7777 +	chr2R_12_11435001	chr2R_11435001	0.42	RAL-646
99	chr2R	12185340	12185400	accord	7370	8	5	60	'2-3	61.12	4.0	1.0	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_5_12185001	chr2R_12185001	0.40	RAL-646
100	chr2R	12336603	12336655	pogo	2070	1	5	52	'3-2	72.47	3.0	1.2	intergenic	CG34021 +,CG8490 +	chr2R_5_12335001	chr2R_12335001	0.60	RAL-646
101	chr2R	12479052	12479104	FB	3	6	5	52	'3-2	68.09	1.2	2.3	intron	Dh44-R2 +	chr2R_5_12475001	chr2R_12475001	0.60	RAL-646
102	chr2R	12670186	12670246	P-element	1	12	13	60	'11-2	48.85	4.9	2.2	5` UTR	nemy -	chr2R_13_12670001	chr2R_12670001	0.85	RAL-646
103	chr2R	12834236	12834311	Burdock	6140	254	7	75	'4-3	60.75	1.7	2.6	intergenic	not near genes	chr2R_7_12830001	chr2R_12830001	0.57	RAL-646
104	chr2R	13042158	13042216	P-element	2870	2	16	58	'4-12	51.51	5.0	2.7	intergenic	not near genes	chr2R_16_13040001	chr2R_13040001	0.25	RAL-646
105	chr2R	13701806	13701833	hopper	3	1385	8	27	'3-5	66.26	3.9	1.6	intron	fas +	chr2R_8_13700001	chr2R_13700001	0.38	RAL-646
106	chr2R	13969869	13969939	roo	8663	9060	12	70	'5-7	63.84	3.4	2.7	3` UTR	Aats-phe +	chr2R_12_13965001	chr2R_13965001	0.42	RAL-646
107	chr2R	14713686	14713753	P-element	1	6	12	67	'10-2	51.37	3.2	2.9	intergenic	mspo -	chr2R_12_14710001	chr2R_14710001	0.83	RAL-646
108	chr2R	15301267	15301326	hopper	1402	1410	6	59	'3-3	59.87	2.2	1.9	intron	Trpm -	chr2R_6_15300001	chr2R_15300001	0.50	RAL-646
109	chr2R	15373918	15373987	opus	7498	4	9	69	'4-5	67.95	1.3	3.9	intergenic	not near genes	chr2R_9_15370001	chr2R_15370001	0.44	RAL-646
110	chr2R	15507111	15507188	Max-element	8531	8233	12	77	'3-9	59.13	1.9	4.1	exon	Ir52d +	chr2R_12_15505001	chr2R_15505001	0.25	RAL-646
111	chr2R	15613772	15613833	P-element	2881	2880	5	61	'3-2	54.00	3.9	1.0	intergenic	CG42524 +	chr2R_5_15610001	chr2R_15610001	0.60	RAL-646
112	chr2R	15637694	15637715	jockey	4680	4699	5	21	'3-2	61.60	6.1	0.7	intron	CG42524 +	chr2R_5_15635001	chr2R_15635001	0.60	RAL-646
113	chr2R	16138660	16138723	P-element	2886	13	12	63	'7-5	53.12	4.5	2.2	intron	Got1 +	chr2R_12_16135001	chr2R_16135001	0.58	RAL-646
114	chr2R	16521613	16521656	hopper	33	1410	5	43	'2-3	68.20	3.6	1.1	intron	Sema-2a +	chr2R_5_16520001	chr2R_16520001	0.40	RAL-646
115	chr2R	16594567	16594614	P-element	2885	2876	11	47	'6-5	46.90	6.0	1.6	5` UTR	CG8306 -	chr2R_11_16590001	chr2R_16590001	0.55	RAL-646
116	chr2R	16606631	16606710	mdg3	5497	5253	7	79	'3-4	61.56	1.2	3.2	intergenic	not near genes	chr2R_7_16605001	chr2R_16605001	0.43	RAL-646
117	chr2R	17986266	17986337	297	392	6589	8	71	'3-5	70.77	2.4	2.4	intron	dpr13 -	chr2R_8_17985001	chr2R_17985001	0.38	RAL-646
118	chr2R	18072229	18072265	I-element	5349	7	5	36	'3-2	59.52	3.3	1.2	intron	CG34386 +	chr2R_5_18070001	chr2R_18070001	0.60	RAL-646
119	chr2R	18261854	18261921	Tabor	3	7318	6	67	'3-3	61.71	4.3	1.1	intergenic	not near genes	chr2R_6_18260001	chr2R_18260001	0.50	RAL-646
120	chr2R	18350624	18350673	297	6947	6585	7	49	'2-5	70.74	0.6	4.4	intron	sbb -	chr2R_7_18350001	chr2R_18350001	0.29	RAL-646
121	chr2R	19061750	19061820	hopper	8	2	7	70	'4-3	60.53	3.7	1.5	intergenic	not near genes	chr2R_7_19060001	chr2R_19060001	0.57	RAL-646
122	chr2R	19143598	19143658	Juan	4203	4026	4	60	'3-1	63.20	3.4	0.9	intron	ena +	chr2R_4_19140001	chr2R_19140001	0.75	RAL-646
123	chr2R	19416191	19416262	roo	8666	9064	8	71	'5-3	65.22	2.1	2.6	intron	hts -	chr2R_8_19415001	chr2R_19415001	0.62	RAL-646
124	chr2R	19631979	19632043	P-element	2883	9	16	64	'11-5	50.70	5.3	2.5	intergenic	sm -	chr2R_16_19630001	chr2R_19630001	0.69	RAL-646
125	chr2R	19799559	19799631	Transpac	2	5222	7	72	'1-6	65.39	3.6	1.5	intergenic	not near genes	chr2R_7_19795001	chr2R_19795001	0.14	RAL-646
126	chr2R	20232565	20232628	flea	4760	240	11	63	'9-2	66.32	0.2	9.2	intron	CG11044 +	chr2R_11_20230001	chr2R_20230001	0.82	RAL-646
127	chr2R	20343556	20343637	opus	112	496	6	81	'2-4	63.87	1.7	2.2	intergenic	CG13870 +	chr2R_6_20340001	chr2R_20340001	0.33	RAL-646
128	chr2R	20446941	20446964	mdg1	7427	412	6	23	'3-3	62.38	1.6	2.3	intron	CG12484 +	chr2R_6_20445001	chr2R_20445001	0.50	RAL-646
129	chr2R	20536387	20536453	Tirant	401	1	7	66	'4-3	67.03	1.2	3.2	intergenic	CG13423 +	chr2R_7_20535001	chr2R_20535001	0.57	RAL-646
130	chr2R	20835990	20836056	P-element	1	2886	7	66	'5-2	48.72	8.1	0.8	5` UTR,5` UTR	insc -,sktl -	chr2R_7_20835001	chr2R_20835001	0.71	RAL-646
131	chr2R	21476898	21476974	Transpac	311	1	10	76	'6-4	68.02	3.6	2.2	intron	Sdc -	chr2R_10_21475001	chr2R_21475001	0.60	RAL-646
132	chr2R	21528853	21528912	roo	398	8663	8	59	'3-5	63.82	5.5	1.2	intron	Egfr +	chr2R_8_21525001	chr2R_21525001	0.38	RAL-646
133	chr2R	21884518	21884581	Burdock	10	257	4	63	'1-3	57.53	2.1	1.3	intron	Fili +	chr2R_4_21880001	chr2R_21880001	0.25	RAL-646
134	chr2R	22287420	22287454	jockey	6	12	6	34	'3-3	60.25	3.9	1.2	intergenic	not near genes	chr2R_6_22285001	chr2R_22285001	0.50	RAL-646
135	chr2R	22406906	22406980	pogo	2096	4	6	74	'2-4	69.40	2.0	2.0	intron	CG6044 +	chr2R_6_22405001	chr2R_22405001	0.33	RAL-646
136	chr2R	22790637	22790665	412	495	7529	11	28	'4-7	66.20	2.4	3.2	intron	CG42260 -	chr2R_11_22790001	chr2R_22790001	0.36	RAL-646
137	chr2R	23111078	23111122	copia	230	5	5	44	'2-3	68.66	3.6	1.1	3` UTR	CR44781 -	chr2R_5_23110001	chr2R_23110001	0.40	RAL-646
138	chr2R	23503916	23503989	hopper	1411	1	10	73	'6-4	64.39	3.1	2.4	intergenic	CG13559 +	chr2R_10_23500001	chr2R_23500001	0.60	RAL-646
139	chr2R	23542841	23542916	mdg1	4	419	18	75	'6-12	66.55	3.8	3.8	exon	Gr59f +	chr2R_18_23540001	chr2R_23540001	0.33	RAL-646
140	chr2R	23821612	23821691	roo	407	8662	8	79	'5-3	67.36	4.9	1.4	intron	CG5549 +	chr2R_8_23820001	chr2R_23820001	0.62	RAL-646
141	chr2R	23962068	23962145	297	6589	395	5	77	'2-3	62.53	3.1	1.2	exon	CG13566 -	chr2R_5_23960001	chr2R_23960001	0.40	RAL-646
142	chr2R	24021564	24021643	pogo	1	2097	10	79	'4-6	66.77	3.4	2.3	intron	CG3907 -	chr2R_10_24020001	chr2R_24020001	0.40	RAL-646
143	chr2R	24925288	24925357	3S18	5772	337	9	69	'5-4	63.26	4.1	1.8	intron	pain -	chr2R_9_24925001	chr2R_24925001	0.56	RAL-646
144	chr2R	25131756	25131821	mdg3	242	5263	4	65	'2-2	59.91	1.2	1.8	intron	lov -	chr2R_4_25130001	chr2R_25130001	0.50	RAL-646
145	chr3L	543399	543440	P-element	7	2884	13	41	'6-7	43.75	3.3	3.0	intergenic	Cypl -	chr3L_13_540001	chr3L_540001	0.46	RAL-646
146	chr3L	634372	634452	roo	409	1	8	80	'1-7	68.62	1.2	3.6	5` UTR	CR43334 +	chr3L_8_630001	chr3L_630001	0.12	RAL-646
147	chr3L	687617	687676	Transpac	311	4943	9	59	'7-2	67.16	0.7	5.3	intron	CG3344 -	chr3L_9_685001	chr3L_685001	0.78	RAL-646
148	chr3L	1098729	1098796	Tirant	8495	5	7	67	'5-2	62.22	4.0	1.4	intron	bab1 -	chr3L_7_1095001	chr3L_1095001	0.71	RAL-646
149	chr3L	1502823	1502846	blood	1	17	6	23	'4-2	51.95	5.2	1.0	intergenic	Psa +,pUf68 -,cue -	chr3L_6_1500001	chr3L_1500001	0.67	RAL-646
150	chr3L	1829571	1829618	Tabor	456	10	5	47	'1-4	60.53	3.0	1.2	intron	Cpr62Ba -	chr3L_5_1825001	chr3L_1825001	0.20	RAL-646
151	chr3L	2021982	2022040	I-element	6	5330	4	58	'2-2	63.96	2.2	1.2	intergenic	CG42357 -,CG42356 -	chr3L_4_2020001	chr3L_2020001	0.50	RAL-646
152	chr3L	2120182	2120201	roo	9040	396	4	19	'2-2	68.58	1.1	1.9	intron	zormin -	chr3L_4_2120001	chr3L_2120001	0.50	RAL-646
153	chr3L	2608938	2608965	hopper	1410	1399	5	27	'3-2	64.90	1.2	2.3	intron	Pxn -	chr3L_5_2605001	chr3L_2605001	0.60	RAL-646
154	chr3L	2617410	2617483	roo	5	407	12	73	'3-9	66.32	2.3	3.6	intron	Pxn -	chr3L_12_2615001	chr3L_2615001	0.25	RAL-646
155	chr3L	2744370	2744449	roo	8666	410	6	79	'3-3	70.81	1.6	2.3	intron	Mrtf -	chr3L_6_2740001	chr3L_2740001	0.50	RAL-646
156	chr3L	3001921	3002002	opus	499	1	7	81	'6-1	73.94	2.9	1.8	5` UTR	FMRFaR +	chr3L_7_3000001	chr3L_3000001	0.86	RAL-646
157	chr3L	3079517	3079591	Burdock	253	4	9	74	'4-5	63.65	2.0	3.0	intron	CG11486 +	chr3L_9_3075001	chr3L_3075001	0.44	RAL-646
158	chr3L	3240529	3240591	diver	207	1	11	62	'1-10	59.70	1.6	4.2	intergenic	not near genes	chr3L_11_3240001	chr3L_3240001	0.09	RAL-646
159	chr3L	3384695	3384723	jockey	4699	4671	6	28	'3-3	61.48	1.5	2.4	intergenic	not near genes	chr3L_6_3380001	chr3L_3380001	0.50	RAL-646
160	chr3L	4608724	4608797	FB	1	1	18	73	'11-7	68.33	2.8	4.7	intron	Src64B -	chr3L_18_4605001	chr3L_4605001	0.61	RAL-646
161	chr3L	4747332	4747404	297	6584	387	13	72	'9-4	66.38	3.2	3.1	intron	RhoGEF64C +	chr3L_13_4745001	chr3L_4745001	0.69	RAL-646
162	chr3L	5438795	5438810	hopper	1409	11	4	15	'3-1	62.33	4.7	0.7	intron	CG34391 +	chr3L_4_5435001	chr3L_5435001	0.75	RAL-646
163	chr3L	5847725	5847797	Burdock	249	6136	7	72	'5-2	68.70	3.0	1.8	intergenic	not near genes	chr3L_7_5845001	chr3L_5845001	0.71	RAL-646
164	chr3L	6502480	6502562	roo	408	8663	11	82	'3-8	70.44	1.4	4.6	intron	sfl +	chr3L_11_6500001	chr3L_6500001	0.27	RAL-646
165	chr3L	6607038	6607105	1360	6	3384	19	67	'8-11	67.57	4.8	3.3	exon	CG8368 +	chr3L_19_6605001	chr3L_6605001	0.42	RAL-646
166	chr3L	6964710	6964782	P-element	2882	2886	13	72	'8-5	56.27	2.7	3.5	5` UTR	sgl -	chr3L_13_6960001	chr3L_6960001	0.62	RAL-646
167	chr3L	7104113	7104186	roo	8674	411	10	73	'3-7	71.29	2.3	3.0	intron	form3 +	chr3L_10_7100001	chr3L_7100001	0.30	RAL-646
168	chr3L	7232579	7232658	pogo	4	2100	9	79	'4-5	66.93	3.1	2.2	intergenic	not near genes	chr3L_9_7230001	chr3L_7230001	0.44	RAL-646
169	chr3L	7808820	7808891	P-element	3	2884	17	71	'10-7	50.43	4.6	3.0	intron	CG32369 -	chr3L_17_7805001	chr3L_7805001	0.59	RAL-646
170	chr3L	7857715	7857795	Transpac	311	3	14	80	'11-3	69.37	3.9	2.9	intron	Pdp1 -	chr3L_14_7855001	chr3L_7855001	0.79	RAL-646
171	chr3L	7999473	7999543	Tabor	476	2	5	70	'2-3	62.98	1.9	1.7	intron	nmo +	chr3L_5_7995001	chr3L_7995001	0.40	RAL-646
172	chr3L	8053029	8053106	pogo	1	2095	6	77	'3-3	70.81	0.3	4.6	3` UTR	nmo +	chr3L_6_8050001	chr3L_8050001	0.50	RAL-646
173	chr3L	8217397	8217468	roo	407	8670	9	71	'6-3	62.89	4.0	1.8	intergenic	not near genes	chr3L_9_8215001	chr3L_8215001	0.67	RAL-646
174	chr3L	8585676	8585705	pogo	2073	2100	6	29	'4-2	68.66	2.3	1.8	intron	CG43078 +	chr3L_6_8585001	chr3L_8585001	0.67	RAL-646
175	chr3L	8695054	8695076	I-element	5326	5348	4	22	'2-2	58.33	1.7	1.5	intergenic	not near genes	chr3L_4_8695001	chr3L_8695001	0.50	RAL-646
176	chr3L	8807409	8807468	jockey	4986	18	5	59	'4-1	66.54	3.7	1.1	intergenic	CG32024 +,CG13312 -	chr3L_5_8805001	chr3L_8805001	0.80	RAL-646
177	chr3L	9267158	9267220	hobo	2937	9	9	62	'4-5	62.61	5.1	1.5	exon	GluRIB +	chr3L_9_9265001	chr3L_9265001	0.44	RAL-646
178	chr3L	9661300	9661355	1360	12	3377	7	55	'4-3	65.10	4.4	1.3	intron	fry -	chr3L_7_9660001	chr3L_9660001	0.57	RAL-646
179	chr3L	10049221	10049294	copia	4	260	11	73	'7-4	64.08	4.7	1.9	intron	dpr6 +	chr3L_11_10045001	chr3L_10045001	0.64	RAL-646
180	chr3L	10096169	10096193	Burdock	32	6144	8	24	'3-5	64.22	5.7	1.2	intron,exon	dpr6 +,CG42825 -	chr3L_8_10095001	chr3L_10095001	0.38	RAL-646
181	chr3L	10319730	10319802	P-element	2884	3	8	72	'6-2	50.89	3.5	1.8	intergenic	mir-276b +	chr3L_8_10315001	chr3L_10315001	0.75	RAL-646
182	chr3L	10476625	10476681	copia	232	4868	6	56	'2-4	65.65	1.3	2.6	intergenic	not near genes	chr3L_6_10475001	chr3L_10475001	0.33	RAL-646
183	chr3L	10572928	10572959	hobo	2917	2710	5	31	'1-4	63.72	3.9	1.0	intron	A2bp1 +	chr3L_5_10570001	chr3L_10570001	0.20	RAL-646
184	chr3L	10723114	10723193	hobo	2938	1	8	79	'5-3	60.59	5.0	1.3	intergenic	not near genes	chr3L_8_10720001	chr3L_10720001	0.62	RAL-646
185	chr3L	11576245	11576295	297	6948	7	5	50	'2-3	71.67	2.3	1.5	intron	CG33489 -	chr3L_5_11575001	chr3L_11575001	0.40	RAL-646
186	chr3L	12158499	12158517	297	8	6585	7	18	'3-4	65.70	2.2	2.2	intron	CG9760 -	chr3L_7_12155001	chr3L_12155001	0.43	RAL-646
187	chr3L	12699917	12699975	roo	395	9	4	58	'3-1	64.13	1.3	1.7	intron	mirr +	chr3L_4_12695001	chr3L_12695001	0.75	RAL-646
188	chr3L	12883897	12883969	297	6591	395	7	72	'2-5	66.16	1.6	2.7	intergenic	not near genes	chr3L_7_12880001	chr3L_12880001	0.29	RAL-646
189	chr3L	12950366	12950427	Tabor	3	468	4	61	'3-1	63.46	2.9	1.0	intergenic	not near genes	chr3L_4_12950001	chr3L_12950001	0.75	RAL-646
190	chr3L	13293775	13293851	mdg3	5259	246	7	76	'2-5	64.13	1.7	2.6	intergenic	not near genes	chr3L_7_13290001	chr3L_13290001	0.29	RAL-646
191	chr3L	13598674	13598742	hobo	2933	3	9	68	'2-7	62.01	3.0	2.2	intron	bru-3 -	chr3L_9_13595001	chr3L_13595001	0.22	RAL-646
192	chr3L	13714323	13714381	flea	4756	232	7	58	'6-1	66.47	5.6	1.1	intron	bru-3 -	chr3L_7_13710001	chr3L_13710001	0.86	RAL-646
193	chr3L	13773833	13773854	Doc	26	5	8	21	'2-6	58.01	3.8	1.7	intron	bru-3 -	chr3L_8_13770001	chr3L_13770001	0.25	RAL-646
194	chr3L	13920066	13920139	P-element	2886	3	16	73	'10-6	52.17	5.8	2.4	intron	Rgl -	chr3L_16_13920001	chr3L_13920001	0.62	RAL-646
195	chr3L	14177650	14177711	P-element	6	2	9	61	'3-6	47.13	7.5	1.1	5` UTR	D -	chr3L_9_14175001	chr3L_14175001	0.33	RAL-646
196	chr3L	14548212	14548279	FB	1	9	9	67	'3-6	65.86	3.5	2.0	intron	CG9238 -	chr3L_9_14545001	chr3L_14545001	0.33	RAL-646
197	chr3L	14567820	14567885	412	1	487	14	65	'7-7	60.46	5.8	2.1	exon	CG42758 +	chr3L_14_14565001	chr3L_14565001	0.50	RAL-646
198	chr3L	15048947	15048965	springer	381	7521	5	18	'2-3	63.42	2.6	1.4	intron	Sytbeta -	chr3L_5_15045001	chr3L_15045001	0.40	RAL-646
199	chr3L	15194409	15194493	HMS-Beagle	246	6794	15	84	'3-12	67.82	5.5	2.3	intergenic	not near genes	chr3L_15_15190001	chr3L_15190001	0.20	RAL-646
200	chr3L	15252786	15252834	I-element	5104	5344	6	48	'5-1	54.81	0.2	5.0	intergenic	not near genes	chr3L_6_15250001	chr3L_15250001	0.83	RAL-646
201	chr3L	15363783	15363843	diver	219	15	4	60	'2-2	59.67	2.2	1.2	intergenic	not near genes	chr3L_4_15360001	chr3L_15360001	0.50	RAL-646
202	chr3L	16151211	16151285	mdg3	5497	5252	8	74	'2-6	63.23	0.8	4.4	intron	CG5151 -	chr3L_8_16150001	chr3L_16150001	0.25	RAL-646
203	chr3L	16161384	16161463	Burdock	6135	6389	8	79	'4-4	65.36	2.5	2.3	intron	CG5151 -	chr3L_8_16160001	chr3L_16160001	0.50	RAL-646
204	chr3L	16662670	16662699	jockey	9	9	10	29	'2-8	60.34	4.9	1.7	3` UTR	Galphaf -	chr3L_10_16660001	chr3L_16660001	0.20	RAL-646
205	chr3L	16683177	16683221	roo	23	395	4	44	'3-1	70.78	2.7	1.1	intron,intron	Lasp -,CG43954 -	chr3L_4_16680001	chr3L_16680001	0.75	RAL-646
206	chr3L	16779252	16779319	P-element	1	10	8	67	'3-5	53.89	5.3	1.3	exon	CG13025 -	chr3L_8_16775001	chr3L_16775001	0.38	RAL-646
207	chr3L	16807705	16807775	P-element	2883	2884	10	70	'7-3	46.88	4.2	1.9	5` UTR,intron	CG9674 -,nudC +	chr3L_10_16805001	chr3L_16805001	0.70	RAL-646
208	chr3L	16910325	16910385	roo	8685	8642	7	60	'1-6	59.94	1.6	2.7	intron	Lmpt +	chr3L_7_16910001	chr3L_16910001	0.14	RAL-646
209	chr3L	17247655	17247705	412	480	17	5	50	'3-2	63.31	1.6	1.9	intron	CR43870 +	chr3L_5_17245001	chr3L_17245001	0.60	RAL-646
210	chr3L	17430075	17430140	1360	3378	3387	10	65	'4-6	67.94	2.9	2.6	intron,intron	CG32174 -,frc -	chr3L_10_17430001	chr3L_17430001	0.40	RAL-646
211	chr3L	17570642	17570726	Transpac	4917	311	12	84	'5-7	68.69	1.7	4.4	intron	Eip74EF -	chr3L_12_17570001	chr3L_17570001	0.42	RAL-646
212	chr3L	17696998	17697029	Doc	24	3	10	31	'5-5	70.85	3.3	2.3	intron	Ccn +	chr3L_10_17695001	chr3L_17695001	0.50	RAL-646
213	chr3L	17904083	17904160	297	6581	6970	9	77	'5-4	67.58	2.9	2.3	intron	Prestin -	chr3L_9_17900001	chr3L_17900001	0.56	RAL-646
214	chr3L	18184014	18184061	FB	18	2	9	47	'5-4	63.38	1.3	3.9	intron	W -	chr3L_9_18180001	chr3L_18180001	0.56	RAL-646
215	chr3L	18235115	18235145	jockey	4754	4786	7	30	'4-3	65.74	2.8	1.8	intergenic	not near genes	chr3L_7_18235001	chr3L_18235001	0.57	RAL-646
216	chr3L	18429313	18429382	roo	399	2	4	69	'2-2	66.59	0.8	2.2	intergenic	not near genes	chr3L_4_18425001	chr3L_18425001	0.50	RAL-646
217	chr3L	18653602	18653655	roo	7	393	6	53	'1-5	67.30	1.2	2.7	intron	MYPT-75D +	chr3L_6_18650001	chr3L_18650001	0.17	RAL-646
218	chr3L	19009253	19009271	jockey	4976	4988	6	18	'3-3	56.53	6.6	0.8	intron	nkd -	chr3L_6_19005001	chr3L_19005001	0.50	RAL-646
219	chr3L	19055654	19055723	1360	3	6	21	69	'13-8	67.06	4.1	4.1	intergenic	not near genes	chr3L_21_19055001	chr3L_19055001	0.62	RAL-646
220	chr3L	19429912	19429965	BS	4989	5077	8	53	'6-2	60.40	2.8	2.1	intergenic	not near genes	chr3L_8_19425001	chr3L_19425001	0.75	RAL-646
221	chr3L	19529853	19529898	roo	8676	9055	5	45	'1-4	64.62	1.3	2.2	intergenic	not near genes	chr3L_5_19525001	chr3L_19525001	0.20	RAL-646
222	chr3L	19903616	19903673	Tirant	8116	8488	5	57	'3-2	65.90	1.5	2.0	intron,intron	Mi-2 -,Su(Tpl) -	chr3L_5_19900001	chr3L_19900001	0.60	RAL-646
223	chr3L	20829306	20829350	roo	402	8693	6	44	'4-2	67.85	4.0	1.2	intron	Pka-R1 +	chr3L_6_20825001	chr3L_20825001	0.67	RAL-646
224	chr3L	21584933	21585013	Tirant	6	401	14	80	'7-7	66.41	3.9	2.9	intergenic	not near genes	chr3L_14_21580001	chr3L_21580001	0.50	RAL-646
225	chr3L	21852871	21852893	jockey	28	4	6	22	'3-3	62.34	2.0	2.0	intron	mub +	chr3L_6_21850001	chr3L_21850001	0.50	RAL-646
226	chr3L	22628510	22628561	jockey	13	4973	5	51	'3-2	61.43	4.5	0.9	intron	CG14459 -	chr3L_5_22625001	chr3L_22625001	0.60	RAL-646
227	chr3L	23884114	23884133	copia	4868	4888	4	19	'3-1	67.24	1.8	1.4	intron	CG40470 -	chr3L_4_23880001	chr3L_23880001	0.75	RAL-646
228	chr3L	24787828	24787859	3S18	27	5763	5	31	'3-2	64.76	2.5	1.4	intergenic	not near genes	chr3L_5_24785001	chr3L_24785001	0.60	RAL-646
229	chr3R	4190907	4190982	pogo	3	2096	9	75	'6-3	68.55	1.4	3.8	intergenic	not near genes	chr3R_9_4190001	chr3R_4190001	0.67	RAL-646
230	chr3R	4490045	4490120	flea	5010	4757	7	75	'1-6	65.69	2.4	2.1	intergenic	not near genes	chr3R_7_4490001	chr3R_4490001	0.14	RAL-646
231	chr3R	4547321	4547337	Tc3	316	316	4	16	'2-2	54.82	7.3	0.5	intron	CG34357 -	chr3R_4_4545001	chr3R_4545001	0.50	RAL-646
232	chr3R	4609448	4609473	R1A1-element	5303	5328	19	25	'13-6	65.71	5.0	3.2	intergenic	not near genes	chr3R_19_4605001	chr3R_4605001	0.68	RAL-646
233	chr3R	5172530	5172577	roo	9045	7	4	47	'1-3	64.00	0.9	2.1	3` UTR	cno -	chr3R_4_5170001	chr3R_5170001	0.25	RAL-646
234	chr3R	5245582	5245654	1360	3386	3	12	72	'7-5	64.92	3.5	2.7	intron	CG12163 -	chr3R_12_5245001	chr3R_5245001	0.58	RAL-646
235	chr3R	5246550	5246606	Tirant	8497	8124	12	56	'4-8	61.94	2.1	3.9	intron	CG12163 -	chr3R_12_5245001	chr3R_5245001	0.33	RAL-646
236	chr3R	5698435	5698517	copia	4869	257	9	82	'3-6	69.90	2.6	2.5	intron	plx +	chr3R_9_5695001	chr3R_5695001	0.33	RAL-646
237	chr3R	6859377	6859458	Tirant	401	8107	10	81	'5-5	68.41	3.6	2.2	intergenic	not near genes	chr3R_10_6855001	chr3R_6855001	0.50	RAL-646
238	chr3R	7029651	7029708	1360	14	3382	14	57	'6-8	62.46	4.3	2.6	intergenic	not near genes	chr3R_14_7025001	chr3R_7025001	0.43	RAL-646
239	chr3R	7577822	7577896	hopper	1414	1411	6	74	'2-4	64.30	1.4	2.5	intron	CG34127 -	chr3R_6_7575001	chr3R_7575001	0.33	RAL-646
240	chr3R	7778262	7778339	transib2	2822	2	9	77	'8-1	67.38	2.4	2.6	intergenic	not near genes	chr3R_9_7775001	chr3R_7775001	0.89	RAL-646
241	chr3R	8329188	8329262	3S18	1	335	7	74	'4-3	67.79	1.2	3.2	intron	Poxm -	chr3R_7_8325001	chr3R_8325001	0.57	RAL-646
242	chr3R	8423202	8423225	jockey	9	20	5	23	'4-1	59.26	2.0	1.7	intron	CG45263 -	chr3R_5_8420001	chr3R_8420001	0.80	RAL-646
243	chr3R	8451022	8451062	412	7077	7532	7	40	'3-4	56.70	1.7	2.6	intron	CG45263 -	chr3R_7_8450001	chr3R_8450001	0.43	RAL-646
244	chr3R	8742368	8742449	opus	7498	7113	7	81	'2-5	70.16	3.8	1.5	intron	CG9801 -	chr3R_7_8740001	chr3R_8740001	0.29	RAL-646
245	chr3R	8965734	8965805	3S18	332	5765	8	71	'2-6	67.05	3.4	1.8	intergenic	not near genes	chr3R_8_8965001	chr3R_8965001	0.25	RAL-646
246	chr3R	9529302	9529341	FB	14	12	4	39	'2-2	61.26	2.4	1.2	3` UTR	by -	chr3R_4_9525001	chr3R_9525001	0.50	RAL-646
247	chr3R	9858588	9858636	roo	24	402	5	48	'1-4	69.34	1.1	2.4	intron	Teh1 -	chr3R_5_9855001	chr3R_9855001	0.20	RAL-646
248	chr3R	10026237	10026301	FB	6	5	12	64	'1-11	60.98	3.4	2.7	intron	Mical -	chr3R_12_10025001	chr3R_10025001	0.08	RAL-646
249	chr3R	10029631	10029708	blood	7017	379	11	77	'5-6	61.14	3.1	2.7	intron	Mical -	chr3R_11_10025001	chr3R_10025001	0.45	RAL-646
250	chr3R	10030719	10030773	BS	5082	5003	7	54	'2-5	58.55	0.8	3.9	intron	Mical -	chr3R_7_10030001	chr3R_10030001	0.29	RAL-646
251	chr3R	10038281	10038346	FB	3	9	10	65	'5-5	63.80	3.2	2.4	intron	Mical -	chr3R_10_10035001	chr3R_10035001	0.50	RAL-646
252	chr3R	10741091	10741119	1360	2	3378	5	28	'2-3	68.05	2.6	1.4	intron	TkR86C -	chr3R_5_10740001	chr3R_10740001	0.40	RAL-646
253	chr3R	11151826	11151898	mdg3	237	5251	6	72	'3-3	64.27	2.5	1.7	3` UTR	Ugt86Di -	chr3R_6_11150001	chr3R_11150001	0.50	RAL-646
254	chr3R	11355306	11355361	I-element	5344	8	12	55	'5-7	61.14	2.3	3.6	intron	pros +	chr3R_12_11355001	chr3R_11355001	0.42	RAL-646
255	chr3R	11564008	11564043	jockey	4773	4973	4	35	'2-2	63.87	1.3	1.7	intron,intron	fabp -,sea -	chr3R_4_11560001	chr3R_11560001	0.50	RAL-646
256	chr3R	11750198	11750260	Tabor	470	2	6	62	'4-2	61.78	3.4	1.4	intergenic	CG43062 +,CG6923 -	chr3R_6_11750001	chr3R_11750001	0.67	RAL-646
257	chr3R	11925139	11925200	pogo	3	2088	4	61	'1-3	61.08	0.4	2.9	intron	Cad87A -	chr3R_4_11925001	chr3R_11925001	0.25	RAL-646
258	chr3R	12235521	12235588	roo	404	8673	20	67	'8-12	64.72	3.0	5.0	exon	Cyp313a2 -	chr3R_20_12235001	chr3R_12235001	0.40	RAL-646
259	chr3R	12609428	12609522	I-element	5343	9	4	94	'1-3	61.33	1.2	1.8	intergenic	not near genes	chr3R_4_12605001	chr3R_12605001	0.25	RAL-646
260	chr3R	12749181	12749232	diver	5887	208	5	51	'2-3	63.50	2.0	1.7	intron	beat-Vc -	chr3R_5_12745001	chr3R_12745001	0.40	RAL-646
261	chr3R	12938057	12938131	1360	3387	3	12	74	'4-8	66.38	1.7	4.4	intergenic	not near genes	chr3R_12_12935001	chr3R_12935001	0.33	RAL-646
262	chr3R	13375867	13375919	hopper	24	1410	7	52	'3-4	69.46	2.2	2.2	intron	CG9813 -	chr3R_7_13375001	chr3R_13375001	0.43	RAL-646
263	chr3R	13438539	13438608	1360	8	3388	12	69	'7-5	64.56	2.1	3.9	intergenic	CR42756 -	chr3R_12_13435001	chr3R_13435001	0.58	RAL-646
264	chr3R	14244475	14244542	mdg1	7450	2	5	67	'3-2	65.40	0.8	2.8	exon	CG43291 -	chr3R_5_14240001	chr3R_14240001	0.60	RAL-646
265	chr3R	14281507	14281554	FB	24	6	14	47	'8-6	64.08	3.0	3.5	intron	trx -	chr3R_14_14280001	chr3R_14280001	0.57	RAL-646
266	chr3R	14406600	14406680	opus	495	7115	17	80	'9-8	68.44	4.5	3.1	intron	cv-c -	chr3R_17_14405001	chr3R_14405001	0.53	RAL-646
267	chr3R	14563621	14563646	opus	498	473	8	25	'2-6	62.91	8.4	0.9	intergenic	not near genes	chr3R_8_14560001	chr3R_14560001	0.25	RAL-646
268	chr3R	14590631	14590700	opus	12	499	16	69	'7-9	68.02	4.1	3.1	intron	stumps +	chr3R_16_14590001	chr3R_14590001	0.44	RAL-646
269	chr3R	14963632	14963665	jockey	4759	4767	6	33	'4-2	65.98	4.6	1.1	intergenic	not near genes	chr3R_6_14960001	chr3R_14960001	0.67	RAL-646
270	chr3R	14972980	14973002	G2	2819	2841	6	22	'4-2	58.13	4.3	1.1	intergenic	not near genes	chr3R_6_14970001	chr3R_14970001	0.67	RAL-646
271	chr3R	15666038	15666135	P-element	2878	2878	5	97	'4-1	55.52	3.0	1.2	intergenic	pxb +	chr3R_5_15665001	chr3R_15665001	0.80	RAL-646
272	chr3R	15810523	15810565	P-element	10	2863	5	42	'2-3	46.70	2.1	1.6	intron	alpha-Man-IIb +	chr3R_5_15810001	chr3R_15810001	0.40	RAL-646
273	chr3R	16301466	16301524	1360	3375	3382	7	58	'3-4	71.07	3.1	1.7	intron	gish +	chr3R_7_16300001	chr3R_16300001	0.43	RAL-646
274	chr3R	16984808	16984865	hopper	1413	8	7	57	'5-2	63.76	4.1	1.4	intron	CG18622 -	chr3R_7_16980001	chr3R_16980001	0.71	RAL-646
275	chr3R	17553913	17554001	Tirant	404	1	11	88	'3-8	65.19	3.4	2.5	intergenic	not near genes	chr3R_11_17550001	chr3R_17550001	0.27	RAL-646
276	chr3R	17673586	17673827	FB	20	5	14	241	'1-13	66.35	5.6	2.1	exon	ald +	chr3R_14_17670001	chr3R_17670001	0.07	RAL-646
277	chr3R	17838192	17838255	hopper	12	1409	9	63	'6-3	61.05	3.1	2.2	intron	tinc +	chr3R_9_17835001	chr3R_17835001	0.67	RAL-646
278	chr3R	17982670	17982742	hobo	2708	5	4	72	'3-1	64.66	4.6	0.7	intron	cpo +	chr3R_4_17980001	chr3R_17980001	0.75	RAL-646
279	chr3R	18640565	18640614	flea	4758	245	8	49	'6-2	67.29	0.8	4.4	intron,intron	qin +,CG14301 -	chr3R_8_18640001	chr3R_18640001	0.75	RAL-646
280	chr3R	18708760	18708834	Tabor	487	8	13	74	'7-6	61.78	3.9	2.7	intron,intron	Cha +,VAChT +	chr3R_13_18705001	chr3R_18705001	0.54	RAL-646
281	chr3R	19197836	19197851	jockey	4698	4681	5	15	'2-3	59.65	2.4	1.5	intron	CG31475 +	chr3R_5_19195001	chr3R_19195001	0.40	RAL-646
282	chr3R	19589925	19589943	BS	4997	5014	6	18	'4-2	57.68	3.3	1.4	intron	Dys +	chr3R_6_19585001	chr3R_19585001	0.67	RAL-646
283	chr3R	20313904	20313964	hopper	1404	1406	8	60	'6-2	61.27	1.4	3.3	intron	CG42668 +	chr3R_8_20310001	chr3R_20310001	0.75	RAL-646
284	chr3R	20425837	20425864	hobo	28	2	5	27	'4-1	64.35	2.1	1.6	intron	Gfrl -	chr3R_5_20425001	chr3R_20425001	0.80	RAL-646
285	chr3R	20533447	20533739	roo	404	8677	10	292	'9-1	67.80	4.5	1.8	intergenic	not near genes	chr3R_10_20530001	chr3R_20530001	0.90	RAL-646
286	chr3R	20789867	20789941	hobo	5	2710	16	74	'10-6	72.04	3.2	3.8	intron	Syp +	chr3R_16_20785001	chr3R_20785001	0.62	RAL-646
287	chr3R	20969247	20969268	pogo	2072	2096	4	21	'2-2	78.30	0.3	3.1	intron	Atpalpha +	chr3R_4_20965001	chr3R_20965001	0.50	RAL-646
288	chr3R	21296494	21296532	P-element	2876	3	10	38	'3-7	36.45	6.1	1.4	intergenic	Hsromega +	chr3R_10_21295001	chr3R_21295001	0.30	RAL-646
289	chr3R	21456719	21456776	hopper	19	5	5	57	'2-3	65.05	5.6	0.8	intergenic	not near genes	chr3R_5_21455001	chr3R_21455001	0.40	RAL-646
290	chr3R	22151167	22151239	diver	7	223	12	72	'9-3	65.42	2.4	3.5	intron	SKIP +	chr3R_12_22150001	chr3R_22150001	0.75	RAL-646
291	chr3R	22238746	22238791	jockey	4965	1	12	45	'6-6	64.27	3.3	2.8	intron	SKIP +	chr3R_12_22235001	chr3R_22235001	0.50	RAL-646
292	chr3R	22632289	22632351	Tirant	400	3	5	62	'3-2	62.87	1.4	2.1	intron	loco -	chr3R_5_22630001	chr3R_22630001	0.60	RAL-646
293	chr3R	22968908	22968973	hopper	1409	1405	8	65	'4-4	63.10	3.8	1.7	intergenic	not near genes	chr3R_8_22965001	chr3R_22965001	0.50	RAL-646
294	chr3R	23393783	23393813	roo	8698	9055	5	30	'1-4	68.69	1.4	2.1	intergenic	not near genes	chr3R_5_23390001	chr3R_23390001	0.20	RAL-646
295	chr3R	23547716	23547752	jockey	4685	4671	6	36	'5-1	62.99	3.3	1.4	intergenic	not near genes	chr3R_6_23545001	chr3R_23545001	0.83	RAL-646
296	chr3R	23617853	23617922	roo	398	1	7	69	'2-5	70.04	1.6	2.7	intron	CG31145 -	chr3R_7_23615001	chr3R_23615001	0.29	RAL-646
297	chr3R	24260168	24260249	297	1	394	7	81	'4-3	72.56	1.3	3.0	intron	jar -	chr3R_7_24260001	chr3R_24260001	0.57	RAL-646
298	chr3R	24470821	24470836	flea	4761	19	4	15	'1-3	63.75	4.7	0.7	intergenic	not near genes	chr3R_4_24470001	chr3R_24470001	0.25	RAL-646
299	chr3R	24719994	24720065	P-element	2884	3	16	71	'9-7	51.68	4.8	2.8	intron	tok +	chr3R_16_24715001	chr3R_24715001	0.56	RAL-646
300	chr3R	24825697	24825766	invader4	3084	2760	11	69	'8-3	67.64	3.1	2.7	intergenic	niki -,CG43166 -	chr3R_11_24825001	chr3R_24825001	0.73	RAL-646
301	chr3R	25366343	25366422	mdg3	5251	243	18	79	'14-4	65.21	4.1	3.5	intron	Fur1 -	chr3R_18_25365001	chr3R_25365001	0.78	RAL-646
302	chr3R	25401762	25401825	roo	398	7	10	63	'7-3	61.96	3.3	2.3	intron	Fur1 -	chr3R_10_25400001	chr3R_25400001	0.70	RAL-646
303	chr3R	25409219	25409244	BS	4734	4710	8	25	'5-3	56.87	0.9	4.2	intron	Fur1 -	chr3R_8_25405001	chr3R_25405001	0.62	RAL-646
304	chr3R	25724934	25725007	blood	369	7011	8	73	'2-6	60.37	3.8	1.7	intron	LpR2 -	chr3R_8_25720001	chr3R_25720001	0.25	RAL-646
305	chr3R	25807663	25807726	Max-element	302	8238	7	63	'5-2	62.48	2.3	2.1	intergenic	CR45652 +	chr3R_7_25805001	chr3R_25805001	0.71	RAL-646
306	chr3R	26299277	26299321	hobo	5	2913	8	44	'6-2	63.47	3.4	1.8	intergenic	not near genes	chr3R_8_26295001	chr3R_26295001	0.75	RAL-646
307	chr3R	26434703	26434753	Tabor	461	6846	8	50	'2-6	64.78	2.7	2.2	intergenic	not near genes	chr3R_8_26430001	chr3R_26430001	0.25	RAL-646
308	chr3R	26798945	26799013	P-element	9	1	8	68	'5-3	58.19	4.3	1.5	intergenic	Tl +	chr3R_8_26795001	chr3R_26795001	0.62	RAL-646
309	chr3R	27859187	27859257	hopper	5	1409	4	70	'3-1	61.77	2.3	1.2	intron	CG34353 -	chr3R_4_27855001	chr3R_27855001	0.75	RAL-646
310	chr3R	27925080	27925151	P-element	2885	2883	11	71	'6-5	55.88	2.7	3.0	3` UTR	CR45566 -	chr3R_11_27925001	chr3R_27925001	0.55	RAL-646
311	chr3R	28002125	28002182	mdg1	415	14	4	57	'3-1	63.86	4.9	0.7	intergenic	not near genes	chr3R_4_28000001	chr3R_28000001	0.75	RAL-646
312	chr3R	28443702	28443765	Burdock	8	244	10	63	'5-5	69.23	2.6	2.8	intron	beat-VI +	chr3R_10_28440001	chr3R_28440001	0.50	RAL-646
313	chr3R	28698775	28698805	1360	1	31	10	30	'6-4	63.85	8.8	1.0	intron	htt +	chr3R_10_28695001	chr3R_28695001	0.60	RAL-646
314	chr3R	29349857	29349926	hobo	2932	2	8	69	'4-4	61.37	4.1	1.6	intergenic	not near genes	chr3R_8_29345001	chr3R_29345001	0.50	RAL-646
315	chr3R	29376561	29376609	hopper	1384	2	4	48	'3-1	69.17	0.0	4.0	intergenic	not near genes	chr3R_4_29375001	chr3R_29375001	0.75	RAL-646
316	chr3R	29391366	29391436	roo	2	403	12	70	'6-6	69.74	1.9	4.1	intron	Ptp99A +	chr3R_12_29390001	chr3R_29390001	0.50	RAL-646
317	chr3R	30440084	30440162	412	5	495	12	78	'6-6	62.23	3.4	2.7	intron	CG15537 -	chr3R_12_30440001	chr3R_30440001	0.50	RAL-646
318	chr3R	30539663	30539727	flea	242	4761	11	64	'4-7	62.69	2.6	3.1	intron	tmod +	chr3R_11_30535001	chr3R_30535001	0.36	RAL-646
319	chr3R	31018526	31018558	jockey	3	35	10	32	'6-4	67.92	6.5	1.3	intergenic	not near genes	chr3R_10_31015001	chr3R_31015001	0.60	RAL-646
320	chr3R	31266248	31266301	roo	401	8684	6	53	'4-2	64.13	2.8	1.6	exon	ppk24 +	chr3R_6_31265001	chr3R_31265001	0.67	RAL-646
321	chr3R	31458418	31458478	jockey	4986	5	14	60	'4-10	63.01	2.2	4.4	3` UTR	lox -	chr3R_14_31455001	chr3R_31455001	0.29	RAL-646
322	chr3R	31507444	31507524	blood	378	7013	12	80	'6-6	62.80	3.9	2.4	intergenic	mey +	chr3R_12_31505001	chr3R_31505001	0.50	RAL-646
323	chr3R	31528111	31528182	roo	10	410	12	71	'4-8	66.36	3.2	2.9	intergenic	not near genes	chr3R_12_31525001	chr3R_31525001	0.33	RAL-646
324	chr3R	31689515	31689575	hopper	1	1411	11	60	'6-5	60.93	4.5	2.0	3` UTR	CR45565 -	chr3R_11_31685001	chr3R_31685001	0.55	RAL-646
325	chr3R	31775024	31775047	jockey	22	18	4	23	'3-1	58.17	3.9	0.8	3` UTR	sip3 +	chr3R_4_31775001	chr3R_31775001	0.75	RAL-646
326	chr3R	31911776	31911824	roo	405	8693	4	48	'2-2	66.57	1.1	1.9	intron	heph -	chr3R_4_31910001	chr3R_31910001	0.50	RAL-646
327	chr4	260102	260166	gypsy	7445	7001	6	64	'4-2	58.67	1.4	2.5	intron	RhoGAP102A +	chr4_6_260001	chr4_260001	0.67	RAL-646
328	chr4	580090	580146	opus	486	12	6	56	'2-4	59.96	1.3	2.6	3` UTR	Ephrin +	chr4_6_580001	chr4_580001	0.33	RAL-646
329	chrX	265605	265677	HMS-Beagle	238	6798	8	72	'2-6	63.39	0.9	4.2	intron	CR43906 +	chrX_8_265001	chrX_265001	0.25	RAL-646
330	chrX	380262	380343	flea	5012	4754	11	81	'3-8	67.51	0.7	6.5	intron	CG32816 -	chrX_11_380001	chrX_380001	0.27	RAL-646
331	chrX	1104452	1104522	opus	495	9	13	70	'10-3	63.54	2.6	3.6	intron	CG3655 -	chrX_13_1100001	chrX_1100001	0.77	RAL-646
332	chrX	1208305	1208380	S-element	4	1711	5	75	'2-3	62.98	1.8	1.8	intergenic	not near genes	chrX_5_1205001	chrX_1205001	0.40	RAL-646
333	chrX	1316324	1316347	jockey	4965	4987	4	23	'2-2	63.50	3.6	0.9	intron	DAAM -	chrX_4_1315001	chrX_1315001	0.50	RAL-646
334	chrX	1333884	1333910	Transpac	282	308	14	26	'8-6	60.21	2.4	4.1	intron	CG11409 -	chrX_14_1330001	chrX_1330001	0.57	RAL-646
335	chrX	1626513	1626569	hopper	1407	1398	5	56	'3-2	58.22	2.8	1.3	intron,intron	Mur2B -,br +	chrX_5_1625001	chrX_1625001	0.60	RAL-646
336	chrX	2755782	2755852	blood	7381	7013	8	70	'2-6	65.25	3.9	1.6	intron	kirre +	chrX_8_2755001	chrX_2755001	0.25	RAL-646
337	chrX	2843544	2843618	roo	399	8661	11	74	'4-7	65.26	3.4	2.5	intron	kirre +	chrX_11_2840001	chrX_2840001	0.36	RAL-646
338	chrX	3262020	3262078	hobo	12	2931	10	58	'6-4	62.19	5.0	1.7	intron	dnc +	chrX_10_3260001	chrX_3260001	0.60	RAL-646
339	chrX	3316653	3316708	roo	400	17	5	55	'4-1	65.60	1.7	1.9	intron,intron	dnc +,CR44886 -	chrX_5_3315001	chrX_3315001	0.80	RAL-646
340	chrX	4257194	4257254	roo	409	21	6	60	'4-2	69.75	1.1	2.9	intergenic	not near genes	chrX_6_4255001	chrX_4255001	0.67	RAL-646
341	chrX	4268044	4268068	roo	8682	7	9	24	'3-6	60.04	3.5	2.0	intergenic	not near genes	chrX_9_4265001	chrX_4265001	0.33	RAL-646
342	chrX	4282262	4282328	Transpac	4923	299	5	66	'4-1	66.85	2.9	1.3	intergenic	not near genes	chrX_5_4280001	chrX_4280001	0.80	RAL-646
343	chrX	4506720	4506794	412	2	488	9	74	'5-4	60.01	1.5	3.6	intron	CR32773 -	chrX_9_4505001	chrX_4505001	0.56	RAL-646
344	chrX	5479142	5479215	springer	388	7150	13	73	'10-3	67.00	3.3	3.0	exon	SPR +	chrX_13_5475001	chrX_5475001	0.77	RAL-646
345	chrX	5689568	5689624	springer	7161	383	4	56	'2-2	72.91	2.5	1.1	intergenic	CG3160 -,CR45525 -,cv +	chrX_4_5685001	chrX_5685001	0.50	RAL-646
346	chrX	6016422	6016500	roo	408	8665	6	78	'4-2	69.49	4.2	1.2	intergenic	not near genes	chrX_6_6015001	chrX_6015001	0.67	RAL-646
347	chrX	6279387	6279430	P-element	2857	3	7	43	'1-6	52.69	4.3	1.3	5` UTR	Ubi-p5E -	chrX_7_6275001	chrX_6275001	0.14	RAL-646
348	chrX	6514227	6514273	FB	6	22	6	46	'1-5	57.95	1.3	2.6	intron	CG42340 -	chrX_6_6510001	chrX_6510001	0.17	RAL-646
349	chrX	6598636	6598717	Tirant	399	8110	18	81	'13-5	66.64	3.9	3.7	intron	APC7 +	chrX_18_6595001	chrX_6595001	0.72	RAL-646
350	chrX	6853422	6853446	jockey	4701	4675	5	24	'3-2	58.97	1.9	1.7	intron	CG14434 -	chrX_5_6850001	chrX_6850001	0.60	RAL-646
351	chrX	8281094	8281160	hopper	14	1414	6	66	'2-4	63.69	1.5	2.4	3` UTR	nAChRalpha3 -	chrX_6_8280001	chrX_8280001	0.33	RAL-646
352	chrX	8936766	8936819	FB	5	8	7	53	'1-6	65.25	1.4	2.9	intron	rdgA +	chrX_7_8935001	chrX_8935001	0.14	RAL-646
353	chrX	8946999	8947028	I-element	148	176	6	29	'2-4	55.03	1.7	2.2	intron	rdgA +	chrX_6_8945001	chrX_8945001	0.33	RAL-646
354	chrX	9514137	9514208	McClintock	4	6424	10	71	'7-3	67.71	3.4	2.3	intron	CG32700 -	chrX_10_9510001	chrX_9510001	0.70	RAL-646
355	chrX	9759478	9759559	Burdock	6134	6388	4	81	'2-2	70.24	1.3	1.7	intergenic	not near genes	chrX_4_9755001	chrX_9755001	0.50	RAL-646
356	chrX	9889408	9889485	hobo	4	2708	12	77	'6-6	66.17	2.9	3.1	intron	CG15249 -	chrX_12_9885001	chrX_9885001	0.50	RAL-646
357	chrX	10119568	10119629	FB	24	6	10	61	'7-3	57.16	2.1	3.2	intron,intron	RhoU +,CR44894 -	chrX_10_10115001	chrX_10115001	0.70	RAL-646
358	chrX	12003928	12003946	P-element	2884	14	4	18	'2-2	61.01	7.7	0.5	intergenic	fw -	chrX_4_12000001	chrX_12000001	0.50	RAL-646
359	chrX	12203596	12203741	P-element	2879	3	15	145	'10-5	48.97	1.9	5.2	intron	Ten-a +	chrX_15_12200001	chrX_12200001	0.67	RAL-646
360	chrX	13276964	13277034	1360	1	8	7	70	'4-3	62.06	2.6	1.9	intron	HDAC4 -	chrX_7_13275001	chrX_13275001	0.57	RAL-646
361	chrX	13554629	13554686	mdg3	5257	5493	5	57	'2-3	63.15	0.6	3.1	intron	CG11816 -	chrX_5_13550001	chrX_13550001	0.40	RAL-646
362	chrX	14067835	14067888	opus	7022	488	7	53	'3-4	67.24	1.0	3.5	intergenic	not near genes	chrX_7_14065001	chrX_14065001	0.43	RAL-646
363	chrX	14429725	14429770	Tabor	463	14	6	45	'2-4	61.78	1.1	2.9	intron	dpr8 +	chrX_6_14425001	chrX_14425001	0.33	RAL-646
364	chrX	14523618	14523682	Tabor	6849	7317	5	64	'2-3	57.27	1.9	1.7	intergenic	not near genes	chrX_5_14520001	chrX_14520001	0.40	RAL-646
365	chrX	15063445	15063482	P-element	14	2861	6	37	'4-2	42.71	4.5	1.1	intergenic	hiw -,CG5548 +	chrX_6_15060001	chrX_15060001	0.67	RAL-646
366	chrX	16090780	16090855	P-element	1	2885	5	75	'3-2	58.05	2.4	1.5	intron	Tob -	chrX_5_16090001	chrX_16090001	0.60	RAL-646
367	chrX	16857067	16857119	pogo	1	2071	4	52	'3-1	63.47	4.0	0.8	intron	CG13003 -	chrX_4_16855001	chrX_16855001	0.75	RAL-646
368	chrX	17022227	17022277	mdg3	5481	5264	4	50	'2-2	62.02	2.7	1.1	intron	CG45002 -	chrX_4_17020001	chrX_17020001	0.50	RAL-646
369	chrX	17051168	17051235	1360	3387	8	20	67	'14-6	66.30	3.0	5.0	intron	CG45002 -	chrX_20_17050001	chrX_17050001	0.70	RAL-646
370	chrX	17090082	17090132	roo	397	18	7	50	'4-3	69.46	1.0	3.5	intergenic	not near genes	chrX_7_17090001	chrX_17090001	0.57	RAL-646
371	chrX	17392335	17392399	hobo	2933	8	15	64	'10-5	65.34	2.9	3.8	intergenic	not near genes	chrX_15_17390001	chrX_17390001	0.67	RAL-646
372	chrX	17743557	17743624	Tirant	8110	387	10	67	'8-2	67.33	2.3	3.0	intron	CG42684 +	chrX_10_17740001	chrX_17740001	0.80	RAL-646
373	chrX	17837964	17838036	S-element	1715	4	4	72	'2-2	62.89	3.2	1.0	intron	CG6398 +	chrX_4_17835001	chrX_17835001	0.50	RAL-646
374	chrX	17911411	17911490	P-element	2882	1	11	79	'5-6	53.09	2.5	3.1	intergenic	CG6847 +,Vps4 +	chrX_11_17910001	chrX_17910001	0.45	RAL-646
375	chrX	18020842	18020868	F-element	173	199	4	26	'2-2	66.67	2.1	1.3	intron	Sh -	chrX_4_18020001	chrX_18020001	0.50	RAL-646
376	chrX	18357639	18357665	jockey	4600	4979	5	26	'3-2	61.34	1.8	1.8	intergenic	not near genes	chrX_5_18355001	chrX_18355001	0.60	RAL-646
377	chrX	18392284	18392358	roo	8671	409	11	74	'3-8	64.97	2.8	2.9	intron	CG32549 -	chrX_11_18390001	chrX_18390001	0.27	RAL-646
378	chrX	18409476	18409494	BS	5009	4999	4	18	'3-1	54.84	1.8	1.4	intron	CG32549 -	chrX_4_18405001	chrX_18405001	0.75	RAL-646
379	chrX	19010339	19010371	mdg3	5467	247	7	32	'4-3	66.75	1.4	2.9	intron	CG43759 +	chrX_7_19010001	chrX_19010001	0.57	RAL-646
380	chrX	19976126	19976178	roo	9053	8663	9	52	'2-7	63.50	1.0	4.5	intergenic	not near genes	chrX_9_19975001	chrX_19975001	0.22	RAL-646
381	chrX	20003069	20003128	roo	19	407	12	59	'5-7	63.50	2.4	3.5	intergenic	not near genes	chrX_12_20000001	chrX_20000001	0.42	RAL-646
382	chrX	20079475	20079551	roo	407	8667	10	76	'6-4	71.82	2.1	3.2	intergenic	not near genes	chrX_10_20075001	chrX_20075001	0.60	RAL-646
383	chrX	20354964	20355031	roo	8663	393	5	67	'4-1	60.61	1.3	2.2	intergenic	not near genes	chrX_5_20350001	chrX_20350001	0.80	RAL-646
384	chrX	20366404	20366466	HMS-Beagle	242	2	14	62	'8-6	67.36	2.1	4.5	intergenic	not near genes	chrX_14_20365001	chrX_20365001	0.57	RAL-646
385	chrX	20593649	20593670	Doc	35	13	6	21	'3-3	64.79	2.7	1.6	intron	RunxA -	chrX_6_20590001	chrX_20590001	0.50	RAL-646
386	chrX	20833224	20833280	jockey	8	4988	6	56	'5-1	61.25	0.9	3.2	intron	shakB -	chrX_6_20830001	chrX_20830001	0.83	RAL-646
387	chrX	20928120	20928187	Transpac	5213	4918	5	67	'2-3	63.07	1.0	2.5	intergenic	not near genes	chrX_5_20925001	chrX_20925001	0.40	RAL-646
388	chrX	21007074	21007145	opus	113	490	11	71	'4-7	72.91	3.2	2.6	intergenic	not near genes	chrX_11_21005001	chrX_21005001	0.36	RAL-646
389	chrX	21580642	21580698	blood	376	16	6	56	'1-5	61.36	0.9	3.2	intergenic	not near genes	chrX_6_21580001	chrX_21580001	0.17	RAL-646
390	chrX	22426809	22426828	Max-element	8240	3	4	19	'2-2	60.28	1.8	1.4	intergenic	not near genes	chrX_4_22425001	chrX_22425001	0.50	RAL-646
391	chrX	22807887	22807931	Burdock	6159	6376	5	44	'2-3	73.60	0.7	2.9	intergenic	CR45464 -	chrX_5_22805001	chrX_22805001	0.40	RAL-646
392	chrX	23010818	23010892	297	393	6587	6	74	'3-3	71.70	2.3	1.8	5` UTR	FucTC -	chrX_6_23010001	chrX_23010001	0.50	RAL-646