SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47461	47492	chr2L	52566	52597	jockey	6	5105	5.0	3.5	4.2	1.2	5136	chr2L	47461	intron	Cda5 -	chr2L	50029	intron	Cda5 -	chr2L	52597	intron	Cda5 -	chr2L_6_50001	chr2L_50001	RAL-642
9	chr2L	686923	686944	chr2L	695957	695984	roo	4	9038	1.5	4.5	3.0	1.0	9061	chr2L	686923	intron	ds -	chr2L	691454	intron	ds -	chr2L	695984	intron	ds -	chr2L_4_690001	chr2L_690001	RAL-642
10	chr2L	770470	770492	chr2L	772245	772273	Bari1	7	1779	3.0	4.0	3.5	1.6	1803	chr2L	770470	intergenic	not near genes	chr2L	771372	intergenic	not near genes	chr2L	772273	intergenic	CR44614 +	chr2L_7_770001	chr2L_770001	RAL-642
13	chr2L	976882	976911	chr2L	984517	984547	roo	5	7634	1.5	0.5	1.0	2.5	7665	chr2L	976882	intergenic	not near genes	chr2L	980714	intergenic	not near genes	chr2L	984547	intergenic	not near genes	chr2L_5_980001	chr2L_980001	RAL-642
14	chr2L	996732	996752	chr2L	1005827	1005847	roo	4	9095	0.0	1.0	0.5	2.7	9115	chr2L	996732	intergenic	not near genes	chr2L	1001290	intergenic	not near genes	chr2L	1005847	intergenic	not near genes	chr2L_4_1000001	chr2L_1000001	RAL-642
19	chr2L	1220129	1220162	chr2L	1227594	1227628	blood	12	7465	1.5	0.5	1.0	6.0	7499	chr2L	1220129	intron	CG42329 +	chr2L	1223878	intron	CG42329 +	chr2L	1227628	intron	CG42329 +	chr2L_12_1220001	chr2L_1220001	RAL-642
29	chr2L	1570687	1570714	chr2L	1573559	1573586	F-element	6	2872	2.5	1.5	2.0	2.0	2899	chr2L	1570687	intron	haf +	chr2L	1572136	intron	haf +	chr2L	1573586	intron	haf +	chr2L_6_1570001	chr2L_1570001	RAL-642
30	chr2L	1678981	1679009	chr2L	1686444	1686452	blood	4	7458	1.0	2.0	1.5	1.6	7471	chr2L	1678981	intron	chinmo +	chr2L	1682716	intron	chinmo +	chr2L	1686452	intron	chinmo +	chr2L_4_1680001	chr2L_1680001	RAL-642
33	chr2L	2100377	2100408	chr2L	2109525	2109558	roo	10	9148	2.5	2.0	2.2	3.1	9181	chr2L	2100377	intron	dpr3 -	chr2L	2104968	intron	dpr3 -	chr2L	2109558	intron	dpr3 -	chr2L_10_2100001	chr2L_2100001	RAL-642
34	chr2L	2112121	2112130	chr2L	2119773	2119792	opus	4	7658	2.0	2.0	2.0	1.3	7671	chr2L	2112121	intergenic	not near genes	chr2L	2115956	intergenic	not near genes	chr2L	2119792	intergenic	not near genes	chr2L_4_2115001	chr2L_2115001	RAL-642
44	chr2L	2661219	2661233	chr2L	2663034	2663040	I-element	4	1823	2.0	2.0	2.0	1.3	1821	chr2L	2661219	intergenic	not near genes	chr2L	2662130	intergenic	not near genes	chr2L	2663040	intergenic	not near genes	chr2L_4_2660001	chr2L_2660001	RAL-642
48	chr2L	2933300	2933321	chr2L	2935476	2935497	pogo	5	2175	4.5	1.5	3.0	1.2	2197	chr2L	2933300	intron	lilli +	chr2L	2934398	intron	lilli +	chr2L	2935497	intron	lilli +	chr2L_5_2930001	chr2L_2930001	RAL-642
50	chr2L	3073030	3073064	chr2L	3078233	3078267	copia	10	5203	3.0	4.0	3.5	2.2	5237	chr2L	3073030	intron	toc -	chr2L	3075648	intron	toc -	chr2L	3078267	intron	toc -	chr2L_10_3075001	chr2L_3075001	RAL-642
53	chr2L	3251497	3251517	chr2L	3259062	3259082	springer	5	7565	4.0	2.0	3.0	1.2	7585	chr2L	3251497	intergenic	not near genes	chr2L	3255290	intergenic	not near genes	chr2L	3259082	intergenic	not near genes	chr2L_5_3255001	chr2L_3255001	RAL-642
65	chr2L	4066041	4066065	chr2L	4068866	4068889	Juan	6	2824	2.5	3.0	2.8	1.6	2848	chr2L	4066041	intron	ed +	chr2L	4067465	intron	ed +	chr2L	4068889	intron	ed +	chr2L_6_4065001	chr2L_4065001	RAL-642
73	chr2L	4601706	4601736	chr2L	4609143	4609177	mdg1	6	7440	2.0	4.0	3.0	1.5	7471	chr2L	4601706	intron	dp -	chr2L	4605442	intron	dp -	chr2L	4609177	intron	dp -	chr2L_6_4605001	chr2L_4605001	RAL-642
77	chr2L	4918183	4918193	chr2L	4923256	4923266	jockey	5	5073	2.0	1.5	1.8	1.8	5083	chr2L	4918183	intron	hoe1 -	chr2L	4920724	intron	hoe1 -	chr2L	4923266	intron	hoe1 -	chr2L_5_4920001	chr2L_4920001	RAL-642
81	chr2L	5342785	5342793	chr2L	5345147	5345173	Doc	4	2376	3.5	2.5	3.0	1.0	2388	chr2L	5342785	intergenic	not near genes	chr2L	5343979	intergenic	not near genes	chr2L	5345173	intergenic	not near genes	chr2L_4_5340001	chr2L_5340001	RAL-642
85	chr2L	5827715	5827735	chr2L	5836723	5836743	roo	8	9005	7.0	4.0	5.5	1.2	9028	chr2L	5827715	intron	TrissinR +	chr2L	5832229	intron	TrissinR +	chr2L	5836743	intron	TrissinR +	chr2L_8_5830001	chr2L_5830001	RAL-642
95	chr2L	6363177	6363180	chr2L	6366088	6366102	Burdock	4	2919	2.5	4.0	3.2	1.0	2925	chr2L	6363177	intergenic	not near genes	chr2L	6364640	intergenic	not near genes	chr2L	6366102	intergenic	not near genes	chr2L_4_6360001	chr2L_6360001	RAL-642
96	chr2L	6426858	6426876	chr2L	6445115	6445136	roo	4	18259	3.0	3.5	3.2	1.0	18278	chr2L	6426858	3` UTR	CG9527 -	chr2L	6435997	intron	CG9527 -	chr2L	6445136	exon	CG9527 -	chr2L_4_6435001	chr2L_6435001	RAL-642
97	chr2L	6426879	6426884	chr2L	6445114	6445144	roo	4	18253	2.0	3.5	2.8	1.1	18265	chr2L	6426879	3` UTR	CG9527 -	chr2L	6436012	intron	CG9527 -	chr2L	6445144	exon	CG9527 -	chr2L_4_6435001	chr2L_6435001	RAL-642
114	chr2L	7959041	7959055	chr2L	7960452	7960466	pogo	7	1411	2.5	0.0	1.2	3.2	1425	chr2L	7959041	intron	Snoo -	chr2L	7959754	intron	Snoo -	chr2L	7960466	intron	Snoo -	chr2L_7_7955001	chr2L_7955001	RAL-642
115	chr2L	7977089	7977109	chr2L	7984064	7984084	297	11	6975	4.0	0.5	2.2	3.4	6995	chr2L	7977089	intron	Snoo -	chr2L	7980586	intron	Snoo -	chr2L	7984084	intron,5` UTR	Snoo -,CG7231 +	chr2L_11_7980001	chr2L_7980001	RAL-642
120	chr2L	8452431	8452454	chr2L	8461601	8461625	roo	6	9171	1.0	4.5	2.8	1.6	9194	chr2L	8452431	intron	fu12 -	chr2L	8457028	intron	fu12 -	chr2L	8461625	intron	fu12 -	chr2L_6_8455001	chr2L_8455001	RAL-642
121	chr2L	8723122	8723144	chr2L	8731490	8731521	Tirant	13	8376	1.0	1.0	1.0	6.5	8399	chr2L	8723122	intron	raw -	chr2L	8727322	intron	raw -	chr2L	8731521	intron	raw -	chr2L_13_8725001	chr2L_8725001	RAL-642
124	chr2L	9000286	9000310	chr2L	9007796	9007819	roo	7	7509	4.5	3.0	3.8	1.5	7533	chr2L	9000286	intergenic	Try29F +	chr2L	9004052	intergenic	not near genes	chr2L	9007819	intergenic	not near genes	chr2L_7_9000001	chr2L_9000001	RAL-642
134	chr2L	9973724	9973758	chr2L	9980843	9980875	HMS-Beagle	10	7113	3.0	3.0	3.0	2.5	7151	chr2L	9973724	intergenic	not near genes	chr2L	9977300	intergenic	not near genes	chr2L	9980875	intergenic	not near genes	chr2L_10_9975001	chr2L_9975001	RAL-642
137	chr2L	10156330	10156355	chr2L	10163800	10163823	blood	9	7468	2.5	3.0	2.8	2.4	7493	chr2L	10156330	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160076	intron	CG44153 -	chr2L	10163823	intron	CG44153 -	chr2L_9_10160001	chr2L_10160001	RAL-642
142	chr2L	10946952	10946973	chr2L	10956167	10956188	roo	9	9215	5.0	5.0	5.0	1.5	9236	chr2L	10946952	intron	dpr2 -	chr2L	10951570	intron	dpr2 -	chr2L	10956188	intron	dpr2 -	chr2L_9_10950001	chr2L_10950001	RAL-642
150	chr2L	11563645	11563667	chr2L	11568838	11568871	copia	5	5202	5.0	1.5	3.2	1.2	5226	chr2L	11563645	intergenic	not near genes	chr2L	11566258	intergenic	not near genes	chr2L	11568871	intergenic	not near genes	chr2L_5_11565001	chr2L_11565001	RAL-642
154	chr2L	11713508	11713536	chr2L	11720975	11721004	blood	12	7467	3.5	2.0	2.8	3.2	7496	chr2L	11713508	intergenic	not near genes	chr2L	11717256	intergenic	not near genes	chr2L	11721004	intergenic	CR44143 +	chr2L_12_11715001	chr2L_11715001	RAL-642
162	chr2L	12728937	12728945	chr2L	12729177	12729185	pogo	5	240	1.5	7.5	4.5	0.9	248	chr2L	12728937	intron	MRP +	chr2L	12729061	intron	MRP +	chr2L	12729185	exon	MRP +	chr2L_5_12725001	chr2L_12725001	RAL-642
163	chr2L	12739173	12739201	chr2L	12743954	12743982	Doc	6	4780	3.0	3.0	3.0	1.5	4809	chr2L	12739173	exon	MRP +	chr2L	12741578	intron	MRP +	chr2L	12743982	exon	MRP +	chr2L_6_12740001	chr2L_12740001	RAL-642
164	chr2L	12861695	12861728	chr2L	12863162	12863195	hobo	10	1466	5.0	2.5	3.8	2.1	1500	chr2L	12861695	intergenic	not near genes	chr2L	12862445	intergenic	not near genes	chr2L	12863195	intergenic	not near genes	chr2L_10_12860001	chr2L_12860001	RAL-642
166	chr2L	12933849	12933876	chr2L	12941315	12941343	blood	7	7467	3.5	2.0	2.8	1.8	7494	chr2L	12933849	intergenic	not near genes	chr2L	12937596	intergenic	not near genes	chr2L	12941343	intergenic	not near genes	chr2L_7_12935001	chr2L_12935001	RAL-642
167	chr2L	13036242	13036252	chr2L	13036482	13036494	X-element	5	242	2.0	1.5	1.8	1.8	252	chr2L	13036242	intron	CG9932 -	chr2L	13036368	intron	CG9932 -	chr2L	13036494	intron	CG9932 -	chr2L_5_13035001	chr2L_13035001	RAL-642
169	chr2L	13241950	13241963	chr2L	13244342	13244355	BS	6	2392	1.5	2.0	1.8	2.1	2405	chr2L	13241950	5` UTR	CR45330 +	chr2L	13243152	intron	CR45330 +	chr2L	13244355	5` UTR	CR45330 +	chr2L_6_13240001	chr2L_13240001	RAL-642
171	chr2L	13405647	13405679	chr2L	13410444	13410474	Doc	12	4796	1.5	3.0	2.2	3.8	4827	chr2L	13405647	exon	CG7110 +	chr2L	13408060	intron	CG7110 +	chr2L	13410474	intron	CG7110 +	chr2L_12_13405001	chr2L_13405001	RAL-642
174	chr2L	13761829	13761835	chr2L	13762913	13762946	Doc	4	1104	3.5	4.5	4.0	0.8	1117	chr2L	13761829	intron	TM9SF4 +	chr2L	13762388	intron	TM9SF4 +	chr2L	13762946	intron	TM9SF4 +	chr2L_4_13760001	chr2L_13760001	RAL-642
175	chr2L	13853089	13853115	chr2L	13862239	13862265	roo	8	9150	4.0	0.5	2.2	2.5	9176	chr2L	13853089	intron	CenG1A +	chr2L	13857677	intron	CenG1A +	chr2L	13862265	intron	CenG1A +	chr2L_8_13855001	chr2L_13855001	RAL-642
189	chr2L	14803899	14803913	chr2L	14809101	14809113	copia	5	5199	2.5	5.0	3.8	1.0	5214	chr2L	14803899	intergenic	not near genes	chr2L	14806506	intergenic	not near genes	chr2L	14809113	intergenic	not near genes	chr2L_5_14805001	chr2L_14805001	RAL-642
193	chr2L	14889951	14889988	chr2L	14890376	14890409	jockey	14	425	3.5	4.5	4.0	2.8	458	chr2L	14889951	intergenic	not near genes	chr2L	14890180	intergenic	not near genes	chr2L	14890409	intergenic	not near genes	chr2L_14_14890001	chr2L_14890001	RAL-642
203	chr2L	15586413	15586440	chr2L	15593465	15593492	297	5	7052	0.5	2.5	1.5	2.0	7079	chr2L	15586413	intergenic	not near genes	chr2L	15589952	intergenic	not near genes	chr2L	15593492	intergenic	not near genes	chr2L_5_15585001	chr2L_15585001	RAL-642
205	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	9	145889	15.5	23.0	19.2	0.4	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_9_16140001	chr2L_16140001	RAL-642
208	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	9	145889	15.5	23.0	19.2	0.4	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_9_16140001	chr2L_16140001	RAL-642
209	chr2L	16280251	16280287	chr2L	16281419	16281449	1360	16	1166	3.0	8.5	5.8	2.4	1198	chr2L	16280251	intron	crp -	chr2L	16280850	intron	crp -	chr2L	16281449	intron	crp -	chr2L_16_16280001	chr2L_16280001	RAL-642
212	chr2L	16958106	16958131	chr2L	16962894	16962918	Doc	4	4788	2.0	2.0	2.0	1.3	4812	chr2L	16958106	intergenic	not near genes	chr2L	16960512	intergenic	not near genes	chr2L	16962918	intergenic	not near genes	chr2L_4_16960001	chr2L_16960001	RAL-642
215	chr2L	17273195	17273226	chr2L	17277976	17278009	F-element	11	4781	4.0	4.0	4.0	2.2	4814	chr2L	17273195	intergenic	not near genes	chr2L	17275602	intergenic	not near genes	chr2L	17278009	intergenic	not near genes	chr2L_11_17275001	chr2L_17275001	RAL-642
220	chr2L	17819927	17819953	chr2L	17825124	17825156	copia	4	5202	0.5	1.0	0.8	2.2	5229	chr2L	17819927	intron	CadN2 -	chr2L	17822542	intron	CadN2 -	chr2L	17825156	intron	CadN2 -	chr2L_4_17820001	chr2L_17820001	RAL-642
221	chr2L	17951943	17951979	chr2L	17953410	17953445	hobo	7	1465	3.0	3.0	3.0	1.8	1502	chr2L	17951943	intergenic	CR44398 -,CR44397 -	chr2L	17952694	intergenic	not near genes	chr2L	17953445	intergenic	not near genes	chr2L_7_17950001	chr2L_17950001	RAL-642
223	chr2L	18051877	18051906	chr2L	18061024	18061053	roo	11	9146	3.5	1.5	2.5	3.1	9176	chr2L	18051877	intron	rdo +	chr2L	18056465	intron	rdo +	chr2L	18061053	intron	rdo +	chr2L_11_18055001	chr2L_18055001	RAL-642
229	chr2L	18408030	18408053	chr2L	18412814	18412837	Doc	4	4784	2.0	0.0	1.0	2.0	4807	chr2L	18408030	intergenic	not near genes	chr2L	18410434	intergenic	not near genes	chr2L	18412837	intergenic	not near genes	chr2L_4_18410001	chr2L_18410001	RAL-642
242	chr2L	19147372	19147402	chr2L	19154407	19154437	297	4	7035	2.0	2.0	2.0	1.3	7065	chr2L	19147372	intron	brat +	chr2L	19150904	intron	brat +	chr2L	19154437	intron	brat +	chr2L_4_19150001	chr2L_19150001	RAL-642
247	chr2L	19620107	19620130	chr2L	19621079	19621114	jockey	7	986	4.0	4.5	4.2	1.3	1007	chr2L	19620107	intron	Lar +	chr2L	19620610	intron	Lar +	chr2L	19621114	intron	Lar +	chr2L_7_19620001	chr2L_19620001	RAL-642
249	chr2L	19652569	19652601	chr2L	19674005	19674037	opus	10	21434	3.0	4.0	3.5	2.2	21468	chr2L	19652569	intron	Lar +	chr2L	19663303	intron	Lar +	chr2L	19674037	intron	Lar +	chr2L_10_19660001	chr2L_19660001	RAL-642
250	chr2L	19703538	19703570	chr2L	19712672	19712676	roo	6	9130	3.0	2.5	2.8	1.6	9138	chr2L	19703538	intron	Lar +	chr2L	19708107	intron	Lar +	chr2L	19712676	intron	Lar +	chr2L_6_19705001	chr2L_19705001	RAL-642
265	chr2L	20568663	20568683	chr2L	20569053	20569070	X-element	5	389	2.0	2.5	2.2	1.6	407	chr2L	20568663	intron	CR45347 +	chr2L	20568866	intron	CR45347 +	chr2L	20569070	intron	CR45347 +	chr2L_5_20565001	chr2L_20565001	RAL-642
266	chr2L	20576226	20576248	chr2L	20583694	20583712	blood	5	7467	3.0	1.5	2.2	1.6	7486	chr2L	20576226	intergenic	not near genes	chr2L	20579969	intergenic	not near genes	chr2L	20583712	3` UTR	CR44909 -	chr2L_5_20575001	chr2L_20575001	RAL-642
273	chr2L	20901480	20901489	chr2L	20902634	20902643	1360	4	1156	0.0	2.0	1.0	2.0	1163	chr2L	20901480	intron,intron	CG43739 -,sky -	chr2L	20902062	intron,intron	CG43739 -,sky -	chr2L	20902643	intron,intron	CG43739 -,sky -	chr2L_4_20900001	chr2L_20900001	RAL-642
275	chr2L	20976640	20976667	chr2L	20981455	20981481	X-element	5	4815	3.0	2.0	2.5	1.4	4841	chr2L	20976640	intron	CG42238 -	chr2L	20979060	intron	CG42238 -	chr2L	20981481	intron	CG42238 -	chr2L_5_20975001	chr2L_20975001	RAL-642
279	chr2L	21020288	21020309	chr2L	21023961	21023986	NOF	9	3674	1.5	5.5	3.5	2.0	3698	chr2L	21020288	intron	CG42238 -	chr2L	21022137	intron	CG42238 -	chr2L	21023986	intron	CG42238 -	chr2L_9_21020001	chr2L_21020001	RAL-642
280	chr2L	21041140	21041160	chr2L	21049401	21049417	Tirant	6	8260	2.5	4.0	3.2	1.4	8277	chr2L	21041140	intron	CG42238 -	chr2L	21045278	intron	CG42238 -	chr2L	21049417	intron	CG42238 -	chr2L_6_21045001	chr2L_21045001	RAL-642
288	chr2L	21981686	21981714	chr2L	21990850	21990879	roo	7	9164	3.0	4.5	3.8	1.5	9193	chr2L	21981686	exon	CG2528 -	chr2L	21986282	intron	CG2528 -	chr2L	21990879	exon	CG2528 -	chr2L_7_21985001	chr2L_21985001	RAL-642
291	chr2R	529349	529356	chr2R	537965	537976	Max-element	4	8621	0.5	2.0	1.2	1.8	8627	chr2R	529349	intron	CG40378 +	chr2R	533662	intron	CG40378 +	chr2R	537976	intron	CG40378 +	chr2R_4_530001	chr2R_530001	RAL-642
292	chr2R	552778	552788	chr2R	553975	553997	1360	4	1210	1.0	3.0	2.0	1.3	1219	chr2R	552778	intron	CG40378 +	chr2R	553388	intron	CG40378 +	chr2R	553997	intron	CG40378 +	chr2R_4_550001	chr2R_550001	RAL-642
293	chr2R	1082366	1082384	chr2R	1087129	1087160	Doc	6	4773	4.5	4.5	4.5	1.1	4794	chr2R	1082366	intron	rl +	chr2R	1084763	intron	rl +	chr2R	1087160	intron	rl +	chr2R_6_1080001	chr2R_1080001	RAL-642
294	chr2R	2498990	2499018	chr2R	2508136	2508163	roo	4	9146	3.5	0.5	2.0	1.3	9173	chr2R	2498990	intron	MFS17 -	chr2R	2503576	intron	MFS17 -	chr2R	2508163	intron	MFS17 -	chr2R_4_2500001	chr2R_2500001	RAL-642
297	chr2R	4624642	4624672	chr2R	4626547	4626577	Bica	8	1905	5.0	1.5	3.2	1.9	1935	chr2R	4624642	intergenic	not near genes	chr2R	4625610	intergenic	not near genes	chr2R	4626577	intergenic	not near genes	chr2R_8_4625001	chr2R_4625001	RAL-642
302	chr2R	4838878	4838893	chr2R	4840401	4840410	transib2	9	1522	1.5	4.5	3.0	2.2	1532	chr2R	4838878	intergenic	not near genes	chr2R	4839644	intergenic	not near genes	chr2R	4840410	intergenic	not near genes	chr2R_9_4835001	chr2R_4835001	RAL-642
316	chr2R	5869284	5869307	chr2R	5874358	5874376	flea	6	5073	1.5	1.0	1.2	2.7	5092	chr2R	5869284	intergenic	not near genes	chr2R	5871830	intergenic	not near genes	chr2R	5874376	intergenic	not near genes	chr2R_6_5870001	chr2R_5870001	RAL-642
321	chr2R	6096725	6096750	chr2R	6101917	6101918	BS	10	5191	3.5	6.5	5.0	1.7	5193	chr2R	6096725	intron	EcR -	chr2R	6099322	intron	EcR -	chr2R	6101918	intron	EcR -	chr2R_10_6095001	chr2R_6095001	RAL-642
329	chr2R	7139946	7139951	chr2R	7141436	7141443	hopper2	4	1492	4.5	10.5	7.5	0.5	1497	chr2R	7139946	intergenic	not near genes	chr2R	7140694	intergenic	not near genes	chr2R	7141443	intergenic	not near genes	chr2R_4_7140001	chr2R_7140001	RAL-642
332	chr2R	7235820	7235848	chr2R	7240911	7240930	jockey	9	5089	6.5	3.5	5.0	1.5	5110	chr2R	7235820	intergenic	not near genes	chr2R	7238375	intergenic	not near genes	chr2R	7240930	intergenic	not near genes	chr2R_9_7235001	chr2R_7235001	RAL-642
336	chr2R	7869188	7869211	chr2R	7873974	7873997	Doc	7	4785	2.5	2.5	2.5	2.0	4809	chr2R	7869188	intron	Dgk -	chr2R	7871592	intron	Dgk -	chr2R	7873997	intron	Dgk -	chr2R_7_7870001	chr2R_7870001	RAL-642
343	chr2R	8330864	8330884	chr2R	8331350	8331370	roo	4	486	5.0	3.0	4.0	0.8	506	chr2R	8330864	intron	pdm3 +	chr2R	8331117	intron	pdm3 +	chr2R	8331370	intron	pdm3 +	chr2R_4_8330001	chr2R_8330001	RAL-642
344	chr2R	8398221	8398240	chr2R	8402987	8403021	Doc	5	4769	3.5	1.5	2.5	1.4	4800	chr2R	8398221	intron	CG2121 -	chr2R	8400621	intron	CG2121 -	chr2R	8403021	intron	CG2121 -	chr2R_5_8400001	chr2R_8400001	RAL-642
345	chr2R	8722768	8722793	chr2R	8723009	8723034	pogo	6	240	2.5	2.5	2.5	1.7	266	chr2R	8722768	intron	CG14767 -	chr2R	8722901	intron	CG14767 -	chr2R	8723034	intron	CG14767 -	chr2R_6_8720001	chr2R_8720001	RAL-642
350	chr2R	9151309	9151317	chr2R	9157776	9157787	Burdock	5	6469	5.5	0.5	3.0	1.2	6478	chr2R	9151309	3` UTR	CG30345 +	chr2R	9154548	intergenic	not near genes	chr2R	9157787	intergenic	CG8008 -	chr2R_5_9150001	chr2R_9150001	RAL-642
351	chr2R	9212716	9212726	chr2R	9213178	9213202	roo	7	469	4.5	6.0	5.2	1.1	486	chr2R	9212716	intergenic	CR45309 +	chr2R	9212959	intergenic	CR45309 +	chr2R	9213202	5` UTR	CR45309 +	chr2R_7_9210001	chr2R_9210001	RAL-642
358	chr2R	9945440	9945474	chr2R	9945625	9945644	BS	5	188	3.0	1.0	2.0	1.7	204	chr2R	9945440	intron	Mef2 -	chr2R	9945542	intron	Mef2 -	chr2R	9945644	intron	Mef2 -	chr2R_5_9945001	chr2R_9945001	RAL-642
359	chr2R	10005847	10005882	chr2R	10007012	10007038	1360	14	1160	5.5	2.5	4.0	2.8	1191	chr2R	10005847	intron	Pka-R2 -	chr2R	10006442	intron	Pka-R2 -	chr2R	10007038	intron	Pka-R2 -	chr2R_14_10005001	chr2R_10005001	RAL-642
361	chr2R	10176885	10176908	chr2R	10186044	10186075	roo	4	9164	1.0	0.0	0.5	2.7	9190	chr2R	10176885	intron	KCNQ -	chr2R	10181480	intron	KCNQ -	chr2R	10186075	intron	KCNQ -	chr2R_4_10180001	chr2R_10180001	RAL-642
368	chr2R	10585574	10585591	chr2R	10594152	10594163	Tirant	5	8579	3.5	2.5	3.0	1.2	8589	chr2R	10585574	intron	psq +	chr2R	10589868	intron	psq +	chr2R	10594163	intron	psq +	chr2R_5_10585001	chr2R_10585001	RAL-642
373	chr2R	11009816	11009836	chr2R	11018990	11019010	roo	6	9171	2.0	2.5	2.2	1.9	9194	chr2R	11009816	intron	luna -	chr2R	11014413	intron	luna -	chr2R	11019010	intron	luna -	chr2R_6_11010001	chr2R_11010001	RAL-642
374	chr2R	11019887	11019909	chr2R	11024939	11024968	jockey	4	5052	4.0	2.0	3.0	1.0	5081	chr2R	11019887	intron	luna -	chr2R	11022428	intron	luna -	chr2R	11024968	intron	luna -	chr2R_4_11020001	chr2R_11020001	RAL-642
376	chr2R	11207813	11207846	chr2R	11208005	11208014	BS	12	186	5.5	0.5	3.0	3.0	201	chr2R	11207813	intron	shn +	chr2R	11207914	intron	shn +	chr2R	11208014	intron	shn +	chr2R_12_11205001	chr2R_11205001	RAL-642
379	chr2R	11472648	11472674	chr2R	11473844	11473871	pogo	7	1197	2.5	1.5	2.0	2.3	1223	chr2R	11472648	intergenic	not near genes	chr2R	11473260	intergenic	not near genes	chr2R	11473871	intergenic	not near genes	chr2R_7_11470001	chr2R_11470001	RAL-642
387	chr2R	12481153	12481165	chr2R	12482941	12482969	roo	4	1792	2.5	3.5	3.0	1.0	1816	chr2R	12481153	exon	Dh44-R2 +	chr2R	12482061	intron	Dh44-R2 +	chr2R	12482969	intron	Dh44-R2 +	chr2R_4_12480001	chr2R_12480001	RAL-642
390	chr2R	12819443	12819466	chr2R	12824520	12824543	jockey	4	5076	3.5	4.5	4.0	0.8	5100	chr2R	12819443	intergenic	not near genes	chr2R	12821993	intergenic	not near genes	chr2R	12824543	intergenic	not near genes	chr2R_4_12820001	chr2R_12820001	RAL-642
393	chr2R	13136843	13136870	chr2R	13141633	13141668	Doc	8	4796	2.0	5.0	3.5	1.8	4825	chr2R	13136843	exon	Cap-G +	chr2R	13139256	intron	Cap-G +	chr2R	13141668	intron	Cap-G +	chr2R_8_13135001	chr2R_13135001	RAL-642
405	chr2R	13905617	13905634	chr2R	13907599	13907599	Rt1a	5	1977	1.5	3.5	2.5	1.4	1982	chr2R	13905617	intron	shot -	chr2R	13906608	intron	shot -	chr2R	13907599	intron	shot -	chr2R_5_13905001	chr2R_13905001	RAL-642
413	chr2R	14467301	14467323	chr2R	14476453	14476475	roo	8	9151	2.0	6.0	4.0	1.6	9174	chr2R	14467301	intergenic	not near genes	chr2R	14471888	intergenic	not near genes	chr2R	14476475	5` UTR	CR44462 +	chr2R_8_14470001	chr2R_14470001	RAL-642
416	chr2R	14889213	14889230	chr2R	14897821	14897838	Max-element	6	8607	3.0	1.0	2.0	2.0	8625	chr2R	14889213	intergenic	Cyp6a8 -	chr2R	14893526	intergenic	not near genes	chr2R	14897838	intergenic	not near genes	chr2R_6_14890001	chr2R_14890001	RAL-642
419	chr2R	15015456	15015480	chr2R	15022880	15022903	mdg1	8	7424	2.5	1.5	2.0	2.7	7447	chr2R	15015456	intron	hbs +	chr2R	15019180	intron	hbs +	chr2R	15022903	intron	hbs +	chr2R_8_15015001	chr2R_15015001	RAL-642
423	chr2R	15119317	15119346	chr2R	15127798	15127826	Tirant	5	8480	3.5	1.5	2.5	1.4	8509	chr2R	15119317	intron	chn +	chr2R	15123572	intron	chn +	chr2R	15127826	intron	chn +	chr2R_5_15120001	chr2R_15120001	RAL-642
437	chr2R	17147245	17147266	chr2R	17152276	17152297	jockey	10	5031	4.0	6.0	5.0	1.7	5052	chr2R	17147245	intergenic	not near genes	chr2R	17149771	intergenic	not near genes	chr2R	17152297	intergenic	not near genes	chr2R_10_17145001	chr2R_17145001	RAL-642
442	chr2R	17236509	17236536	chr2R	17241713	17241719	copia	9	5202	1.0	2.0	1.5	3.6	5210	chr2R	17236509	intron	mbl +	chr2R	17239114	intron	mbl +	chr2R	17241719	intron	mbl +	chr2R_9_17235001	chr2R_17235001	RAL-642
450	chr2R	17784048	17784057	chr2R	17784287	17784298	pogo	4	240	2.5	9.0	5.8	0.6	250	chr2R	17784048	intergenic	mir-31a -	chr2R	17784173	intergenic	mir-31a -	chr2R	17784298	intergenic	mir-31a -	chr2R_4_17780001	chr2R_17780001	RAL-642
460	chr2R	18358396	18358407	chr2R	18372608	18372619	roo	5	14211	1.5	1.5	1.5	2.0	14223	chr2R	18358396	intergenic	not near genes	chr2R	18365508	intergenic	not near genes	chr2R	18372619	intergenic	not near genes	chr2R_5_18365001	chr2R_18365001	RAL-642
466	chr2R	18590889	18590901	chr2R	18600041	18600053	roo	4	9152	2.0	7.5	4.8	0.7	9164	chr2R	18590889	intron	GEFmeso -	chr2R	18595471	intron	GEFmeso -	chr2R	18600053	intron	GEFmeso -	chr2R_4_18595001	chr2R_18595001	RAL-642
483	chr2R	19776620	19776630	chr2R	19779935	19779953	jockey	5	3321	2.0	6.0	4.0	1.0	3333	chr2R	19776620	intergenic	not near genes	chr2R	19778286	intergenic	not near genes	chr2R	19779953	intergenic	not near genes	chr2R_5_19775001	chr2R_19775001	RAL-642
484	chr2R	19914857	19914873	chr2R	19922269	19922280	mdg1	6	7411	2.0	1.5	1.8	2.1	7423	chr2R	19914857	intergenic	not near genes	chr2R	19918568	intergenic	not near genes	chr2R	19922280	intergenic	not near genes	chr2R_6_19915001	chr2R_19915001	RAL-642
485	chr2R	19957429	19957456	chr2R	19962630	19962658	copia	4	5202	5.0	4.0	4.5	0.7	5229	chr2R	19957429	intergenic	CG44623 +	chr2R	19960044	intergenic	not near genes	chr2R	19962658	intergenic	not near genes	chr2R_4_19960001	chr2R_19960001	RAL-642
502	chr2R	20739442	20739474	chr2R	20744209	20744242	F-element	7	4766	3.5	6.0	4.8	1.2	4800	chr2R	20739442	intron	dpr +	chr2R	20741842	intron	dpr +	chr2R	20744242	intron	dpr +	chr2R_7_20740001	chr2R_20740001	RAL-642
510	chr2R	21753089	21753111	chr2R	21753574	21753596	roo	5	485	5.5	3.0	4.2	1.0	507	chr2R	21753089	intergenic	not near genes	chr2R	21753342	intergenic	not near genes	chr2R	21753596	intergenic	not near genes	chr2R_5_21750001	chr2R_21750001	RAL-642
519	chr2R	22465317	22465343	chr2R	22465516	22465542	BS	4	199	1.5	0.5	1.0	2.0	225	chr2R	22465317	intron	CG10384 +	chr2R	22465430	intron	CG10384 +	chr2R	22465542	intron	CG10384 +	chr2R_4_22465001	chr2R_22465001	RAL-642
521	chr2R	22525755	22525782	chr2R	22529310	22529310	jockey	8	3552	0.5	3.0	1.8	2.9	3555	chr2R	22525755	intron	px -	chr2R	22527532	intron	px -	chr2R	22529310	intron	px -	chr2R_8_22525001	chr2R_22525001	RAL-642
537	chr2R	23529585	23529604	chr2R	23537148	23537156	412	6	7566	3.5	3.5	3.5	1.3	7571	chr2R	23529585	intron	bw -	chr2R	23533370	intron	bw -	chr2R	23537156	exon	bw -	chr2R_6_23530001	chr2R_23530001	RAL-642
541	chr2R	23914317	23914332	chr2R	23921933	23921956	412	6	7619	1.0	7.0	4.0	1.2	7639	chr2R	23914317	exon	kcc +	chr2R	23918136	intron	kcc +	chr2R	23921956	intron	kcc +	chr2R_6_23915001	chr2R_23915001	RAL-642
544	chr2R	24353428	24353456	chr2R	24361789	24361818	roo	11	8361	2.5	1.5	2.0	3.7	8390	chr2R	24353428	intron,intron	bs +,CR44811 -	chr2R	24357623	intron,intron	bs +,CR44811 -	chr2R	24361818	intron,intron	bs +,CR44811 -	chr2R_11_24355001	chr2R_24355001	RAL-642
547	chr2R	24727884	24727917	chr2R	24735392	24735396	mdg1	7	7503	2.0	4.5	3.2	1.7	7512	chr2R	24727884	intron	Mid1 -	chr2R	24731640	intron	Mid1 -	chr2R	24735396	intron	Mid1 -	chr2R_7_24730001	chr2R_24730001	RAL-642
548	chr2R	24763616	24763641	chr2R	24765584	24765605	G2	10	1971	5.0	4.0	4.5	1.8	1989	chr2R	24763616	exon	CG3894 +	chr2R	24764610	intron	CG3894 +	chr2R	24765605	exon	CG3894 +	chr2R_10_24760001	chr2R_24760001	RAL-642
555	chr3L	402690	402718	chr3L	409742	409758	297	9	7048	4.5	1.5	3.0	2.2	7068	chr3L	402690	intergenic	not near genes	chr3L	406224	intergenic	not near genes	chr3L	409758	intergenic	not near genes	chr3L_9_405001	chr3L_405001	RAL-642
558	chr3L	858005	858019	chr3L	866478	866495	Tirant	6	8475	4.0	3.5	3.8	1.2	8490	chr3L	858005	intergenic	not near genes	chr3L	862250	intergenic	not near genes	chr3L	866495	intergenic	CG12502 +	chr3L_6_860001	chr3L_860001	RAL-642
559	chr3L	925175	925201	chr3L	932601	932623	mdg1	12	7425	3.5	2.5	3.0	3.0	7448	chr3L	925175	intron	Glut1 +	chr3L	928899	intron	Glut1 +	chr3L	932623	intron	Glut1 +	chr3L_12_925001	chr3L_925001	RAL-642
561	chr3L	939787	939802	chr3L	940896	940918	jockey	5	1118	3.5	3.5	3.5	1.1	1131	chr3L	939787	intron	Glut1 +	chr3L	940352	intron	Glut1 +	chr3L	940918	intron	Glut1 +	chr3L_5_940001	chr3L_940001	RAL-642
567	chr3L	1219595	1219619	chr3L	1227328	1227328	412	6	7728	4.5	3.0	3.8	1.2	7733	chr3L	1219595	intron	mwh +	chr3L	1223462	intron	mwh +	chr3L	1227328	intron	mwh +	chr3L_6_1220001	chr3L_1220001	RAL-642
572	chr3L	1505999	1506030	chr3L	1513596	1513627	17.6	4	7596	2.5	3.5	3.0	1.0	7628	chr3L	1505999	intron,intron	Psa +,cue -	chr3L	1509813	intron,intron	Psa +,cue -	chr3L	1513627	intron,intron	Psa +,cue -	chr3L_4_1505001	chr3L_1505001	RAL-642
584	chr3L	2447528	2447536	chr3L	2456659	2456692	roo	7	9146	1.5	3.5	2.5	2.0	9164	chr3L	2447528	intron	CG45186 +	chr3L	2452110	intron	CG45186 +	chr3L	2456692	intron	CG45186 +	chr3L_7_2450001	chr3L_2450001	RAL-642
594	chr3L	2927838	2927862	chr3L	2936114	2936136	Tirant	6	8276	1.5	1.0	1.2	2.7	8298	chr3L	2927838	intron	Shab +	chr3L	2931987	intron	Shab +	chr3L	2936136	intron	Shab +	chr3L_6_2930001	chr3L_2930001	RAL-642
597	chr3L	3281438	3281458	chr3L	3281934	3281935	Doc	5	492	3.0	6.0	4.5	0.9	497	chr3L	3281438	intron	CG12017 +	chr3L	3281686	intron	CG12017 +	chr3L	3281935	intron	CG12017 +	chr3L_5_3280001	chr3L_3280001	RAL-642
598	chr3L	3281459	3281475	chr3L	3281933	3281970	Doc	9	493	1.5	5.5	3.5	2.0	511	chr3L	3281459	intron	CG12017 +	chr3L	3281714	intron	CG12017 +	chr3L	3281970	intron	CG12017 +	chr3L_9_3280001	chr3L_3280001	RAL-642
601	chr3L	3475075	3475095	chr3L	3475518	3475538	jockey	11	443	2.5	4.5	3.5	2.4	463	chr3L	3475075	intron	CG42324 +	chr3L	3475306	intron	CG42324 +	chr3L	3475538	intron	CG42324 +	chr3L_11_3475001	chr3L_3475001	RAL-642
603	chr3L	3601297	3601321	chr3L	3606607	3606632	copia	4	5310	4.5	1.5	3.0	1.0	5335	chr3L	3601297	intron	Eip63E +	chr3L	3603964	intron	Eip63E +	chr3L	3606632	intron	Eip63E +	chr3L_4_3600001	chr3L_3600001	RAL-642
613	chr3L	4901125	4901150	chr3L	4907315	4907340	diver	4	6188	5.0	2.0	3.5	0.9	6215	chr3L	4901125	intergenic	CG13704 +	chr3L	4904232	intergenic	not near genes	chr3L	4907340	intergenic	not near genes	chr3L_4_4900001	chr3L_4900001	RAL-642
619	chr3L	5926323	5926350	chr3L	5926505	5926516	BS	9	181	4.5	6.0	5.2	1.5	193	chr3L	5926323	intron	Vap-33B +	chr3L	5926420	intron	Vap-33B +	chr3L	5926516	intron	Vap-33B +	chr3L_9_5925001	chr3L_5925001	RAL-642
624	chr3L	6220917	6220948	chr3L	6230069	6230099	roo	6	9151	5.0	5.5	5.2	1.0	9182	chr3L	6220917	5` UTR	pncr008:3L +	chr3L	6225508	intergenic	not near genes	chr3L	6230099	intergenic	not near genes	chr3L_6_6225001	chr3L_6225001	RAL-642
625	chr3L	6335024	6335038	chr3L	6335495	6335509	297	5	469	2.0	6.0	4.0	1.0	485	chr3L	6335024	intron	CG13300 -	chr3L	6335266	intron	CG13300 -	chr3L	6335509	intron	CG13300 -	chr3L_5_6335001	chr3L_6335001	RAL-642
630	chr3L	6887519	6887550	chr3L	6895011	6895042	roo	4	7492	2.5	1.5	2.0	1.3	7523	chr3L	6887519	intergenic	not near genes	chr3L	6891280	intergenic	not near genes	chr3L	6895042	intergenic	not near genes	chr3L_4_6890001	chr3L_6890001	RAL-642
641	chr3L	7793729	7793745	chr3L	7800781	7800797	297	6	7052	1.0	2.0	1.5	2.4	7068	chr3L	7793729	intron	CG32369 -	chr3L	7797263	intron	CG32369 -	chr3L	7800797	intron	CG32369 -	chr3L_6_7795001	chr3L_7795001	RAL-642
643	chr3L	7886529	7886547	chr3L	7889047	7889065	Stalker4	4	2518	0.0	2.0	1.0	2.0	2536	chr3L	7886529	intron	CG32365 +	chr3L	7887797	intron	CG32365 +	chr3L	7889065	intron	CG32365 +	chr3L_4_7885001	chr3L_7885001	RAL-642
644	chr3L	7985361	7985397	chr3L	7987689	7987725	NOF	7	2328	1.5	1.5	1.5	2.8	2364	chr3L	7985361	intron	nmo +	chr3L	7986543	intron	nmo +	chr3L	7987725	intron	nmo +	chr3L_7_7985001	chr3L_7985001	RAL-642
646	chr3L	8481794	8481802	chr3L	8490943	8490959	roo	4	9156	5.5	6.0	5.8	0.6	9165	chr3L	8481794	intron	CG43163 -	chr3L	8486376	intron	CG43163 -	chr3L	8490959	intron	CG43163 -	chr3L_4_8485001	chr3L_8485001	RAL-642
647	chr3L	8791275	8791289	chr3L	8796691	8796709	I-element	5	5418	4.5	0.5	2.5	1.4	5434	chr3L	8791275	exon	Fhos +	chr3L	8793992	intron	Fhos +	chr3L	8796709	intron	Fhos +	chr3L_5_8790001	chr3L_8790001	RAL-642
651	chr3L	9076931	9076960	chr3L	9084491	9084513	412	14	7559	3.5	1.5	2.5	4.0	7582	chr3L	9076931	exon	Tequila +	chr3L	9080722	intron	Tequila +	chr3L	9084513	exon	Tequila +	chr3L_14_9080001	chr3L_9080001	RAL-642
652	chr3L	9130566	9130582	chr3L	9134325	9134343	412	5	3760	5.0	4.5	4.8	0.9	3777	chr3L	9130566	intergenic	bol -	chr3L	9132454	intergenic	not near genes	chr3L	9134343	intergenic	Dhpr +	chr3L_5_9130001	chr3L_9130001	RAL-642
653	chr3L	9219240	9219274	chr3L	9219912	9219946	jockey	10	667	6.0	3.5	4.8	1.7	706	chr3L	9219240	intergenic	not near genes	chr3L	9219593	intergenic	not near genes	chr3L	9219946	intergenic	not near genes	chr3L_10_9215001	chr3L_9215001	RAL-642
654	chr3L	9270619	9270651	chr3L	9278372	9278388	roo	9	7751	3.0	1.0	2.0	3.0	7769	chr3L	9270619	intron	GluRIB +	chr3L	9274504	intron	GluRIB +	chr3L	9278388	exon	GluRIB +	chr3L_9_9270001	chr3L_9270001	RAL-642
656	chr3L	9575911	9575938	chr3L	9580989	9581015	jockey	9	5077	8.5	2.0	5.2	1.5	5104	chr3L	9575911	intron	CG42673 +	chr3L	9578463	intron	CG42673 +	chr3L	9581015	intron	CG42673 +	chr3L_9_9575001	chr3L_9575001	RAL-642
668	chr3L	10414967	10414978	chr3L	10417310	10417334	Doc	6	2355	0.0	1.5	0.8	3.3	2367	chr3L	10414967	intergenic	CG12362 +	chr3L	10416150	intergenic	not near genes	chr3L	10417334	intergenic	not near genes	chr3L_6_10415001	chr3L_10415001	RAL-642
675	chr3L	11087078	11087089	chr3L	11088867	11088874	S-element	8	1788	1.5	4.0	2.8	2.1	1796	chr3L	11087078	intron	JIL-1 -	chr3L	11087976	intron	JIL-1 -	chr3L	11088874	intron	JIL-1 -	chr3L_8_11085001	chr3L_11085001	RAL-642
676	chr3L	11105291	11105327	chr3L	11107001	11107037	X-element	6	1710	2.0	1.0	1.5	2.4	1746	chr3L	11105291	intergenic	not near genes	chr3L	11106164	intergenic	not near genes	chr3L	11107037	exon	CG32073 -	chr3L_6_11105001	chr3L_11105001	RAL-642
678	chr3L	11264462	11264496	chr3L	11271414	11271446	17.6	4	6951	3.5	1.5	2.5	1.1	6984	chr3L	11264462	intergenic	not near genes	chr3L	11267954	intergenic	not near genes	chr3L	11271446	intergenic	not near genes	chr3L_4_11265001	chr3L_11265001	RAL-642
679	chr3L	11329687	11329726	chr3L	11332892	11332929	jockey	4	3204	4.5	2.0	3.2	1.0	3242	chr3L	11329687	intergenic	not near genes	chr3L	11331308	intergenic	not near genes	chr3L	11332929	intergenic	not near genes	chr3L_4_11330001	chr3L_11330001	RAL-642
681	chr3L	11564788	11564813	chr3L	11572413	11572438	412	7	7621	2.0	3.0	2.5	2.0	7650	chr3L	11564788	exon	CG33267 +	chr3L	11568613	intron	CG33267 +	chr3L	11572438	exon	CG33267 +	chr3L_7_11565001	chr3L_11565001	RAL-642
685	chr3L	11723092	11723116	chr3L	11727887	11727909	Doc	6	4794	0.0	1.5	0.8	3.3	4817	chr3L	11723092	3` UTR	Bmcp +	chr3L	11725500	intron	Bmcp +	chr3L	11727909	3` UTR	Bmcp +	chr3L_6_11725001	chr3L_11725001	RAL-642
689	chr3L	11864557	11864583	chr3L	11865850	11865858	pogo	8	1292	3.0	2.0	2.5	2.3	1301	chr3L	11864557	intron	CG44837 -	chr3L	11865208	intron	CG44837 -	chr3L	11865858	intron	CG44837 -	chr3L_8_11865001	chr3L_11865001	RAL-642
700	chr3L	12874925	12874950	chr3L	12877217	12877242	jockey	7	2290	2.0	0.5	1.2	3.2	2317	chr3L	12874925	intergenic	not near genes	chr3L	12876084	intergenic	not near genes	chr3L	12877242	intergenic	not near genes	chr3L_7_12875001	chr3L_12875001	RAL-642
702	chr3L	12957787	12957813	chr3L	12962269	12962295	copia	4	4482	3.5	3.0	3.2	1.0	4508	chr3L	12957787	intergenic	not near genes	chr3L	12960041	intergenic	not near genes	chr3L	12962295	intergenic	not near genes	chr3L_4_12960001	chr3L_12960001	RAL-642
707	chr3L	13525161	13525167	chr3L	13532957	13532963	roo	5	7796	2.0	4.5	3.2	1.2	7802	chr3L	13525161	intergenic	not near genes	chr3L	13529062	intergenic	not near genes	chr3L	13532963	intergenic	not near genes	chr3L_5_13525001	chr3L_13525001	RAL-642
708	chr3L	13525168	13525182	chr3L	13532954	13532977	roo	7	7792	2.0	4.0	3.0	1.8	7809	chr3L	13525168	intergenic	not near genes	chr3L	13529072	intergenic	not near genes	chr3L	13532977	intergenic	not near genes	chr3L_7_13525001	chr3L_13525001	RAL-642
711	chr3L	13804544	13804575	chr3L	13822830	13822833	roo	6	18278	2.5	2.0	2.2	1.9	18289	chr3L	13804544	intergenic	not near genes	chr3L	13813688	intergenic	not near genes	chr3L	13822833	intergenic	not near genes	chr3L_6_13810001	chr3L_13810001	RAL-642
719	chr3L	14245567	14245592	chr3L	14245661	14245684	1360	12	91	3.5	2.5	3.0	3.0	117	chr3L	14245567	3` UTR	CR44561 -	chr3L	14245626	3` UTR	CR44561 -	chr3L	14245684	3` UTR	CR44561 -	chr3L_12_14245001	chr3L_14245001	RAL-642
726	chr3L	14721186	14721205	chr3L	14723029	14723048	Rt1c	7	1841	5.5	3.5	4.5	1.3	1862	chr3L	14721186	intron	ome +	chr3L	14722117	intron	ome +	chr3L	14723048	intron	ome +	chr3L_7_14720001	chr3L_14720001	RAL-642
732	chr3L	15085057	15085085	chr3L	15086215	15086248	1360	4	1162	0.0	2.0	1.0	2.0	1191	chr3L	15085057	intron	cp309 -	chr3L	15085652	intron	cp309 -	chr3L	15086248	intron	cp309 -	chr3L_4_15085001	chr3L_15085001	RAL-642
740	chr3L	15899231	15899258	chr3L	15899792	15899810	jockey	6	555	1.5	2.5	2.0	2.0	579	chr3L	15899231	intergenic	pHCl -	chr3L	15899520	intergenic	pHCl -	chr3L	15899810	intergenic	sff -	chr3L_6_15895001	chr3L_15895001	RAL-642
742	chr3L	16184116	16184139	chr3L	16188931	16188957	X-element	5	4818	0.5	3.0	1.8	1.8	4841	chr3L	16184116	intergenic	not near genes	chr3L	16186536	intergenic	not near genes	chr3L	16188957	intergenic	not near genes	chr3L_5_16185001	chr3L_16185001	RAL-642
746	chr3L	16493991	16494013	chr3L	16494508	16494530	jockey	7	516	7.0	6.0	6.5	0.9	539	chr3L	16493991	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494260	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494530	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_7_16490001	chr3L_16490001	RAL-642
752	chr3L	16945729	16945759	chr3L	16954879	16954885	roo	8	9142	2.5	2.5	2.5	2.3	9156	chr3L	16945729	exon	Obp73a +	chr3L	16950307	intergenic	not near genes	chr3L	16954885	5` UTR	Nc73EF +	chr3L_8_16950001	chr3L_16950001	RAL-642
761	chr3L	17516988	17517005	chr3L	17524544	17524560	412	8	7555	4.0	4.5	4.2	1.5	7572	chr3L	17516988	intron	CG7564 +	chr3L	17520774	intron	CG7564 +	chr3L	17524560	3` UTR	CG7564 +	chr3L_8_17520001	chr3L_17520001	RAL-642
766	chr3L	18047715	18047738	chr3L	18056772	18056794	roo	6	9056	0.5	1.0	0.8	3.3	9079	chr3L	18047715	intron	Eip75B -	chr3L	18052254	intron	Eip75B -	chr3L	18056794	intron	Eip75B -	chr3L_6_18050001	chr3L_18050001	RAL-642
781	chr3L	18772407	18772439	chr3L	18781088	18781120	roo	11	8679	2.5	4.0	3.2	2.6	8713	chr3L	18772407	intron	ftz-f1 -	chr3L	18776764	intron	ftz-f1 -	chr3L	18781120	intron	ftz-f1 -	chr3L_11_18775001	chr3L_18775001	RAL-642
786	chr3L	19008840	19008870	chr3L	19009176	19009208	jockey	4	337	1.0	2.5	1.8	1.4	368	chr3L	19008840	intron	nkd -	chr3L	19009024	intron	nkd -	chr3L	19009208	intron	nkd -	chr3L_4_19005001	chr3L_19005001	RAL-642
788	chr3L	19115637	19115674	chr3L	19115815	19115850	BS	4	177	5.0	2.0	3.5	0.9	213	chr3L	19115637	intron	CG14082 -	chr3L	19115744	intron	CG14082 -	chr3L	19115850	intron	CG14082 -	chr3L_4_19115001	chr3L_19115001	RAL-642
789	chr3L	19117045	19117070	chr3L	19124492	19124517	mdg1	6	7446	6.5	3.0	4.8	1.0	7472	chr3L	19117045	intron	CG14082 -	chr3L	19120781	intron	CG14082 -	chr3L	19124517	intron	CG14082 -	chr3L_6_19120001	chr3L_19120001	RAL-642
792	chr3L	19208058	19208089	chr3L	19209432	19209457	Doc	8	1372	2.5	3.0	2.8	2.1	1399	chr3L	19208058	intron	fz2 -	chr3L	19208758	intron	fz2 -	chr3L	19209457	intron	fz2 -	chr3L_8_19205001	chr3L_19205001	RAL-642
798	chr3L	19848527	19848534	chr3L	19857698	19857724	roo	4	9184	2.0	3.5	2.8	1.1	9197	chr3L	19848527	intron	Papss +	chr3L	19853126	intron	Papss +	chr3L	19857724	intron	Papss +	chr3L_4_19850001	chr3L_19850001	RAL-642
799	chr3L	19861823	19861853	chr3L	19863611	19863641	S-element	4	1788	2.5	1.5	2.0	1.3	1818	chr3L	19861823	5` UTR	CR45433 +	chr3L	19862732	intergenic	not near genes	chr3L	19863641	intergenic	not near genes	chr3L_4_19860001	chr3L_19860001	RAL-642
803	chr3L	20257337	20257363	chr3L	20258457	20258483	pogo	7	1120	0.5	2.0	1.2	3.2	1146	chr3L	20257337	intron	rdgC +	chr3L	20257910	intron	rdgC +	chr3L	20258483	intron	rdgC +	chr3L_7_20255001	chr3L_20255001	RAL-642
805	chr3L	20476753	20476760	chr3L	20484352	20484359	springer	4	7599	2.0	2.0	2.0	1.3	7606	chr3L	20476753	3` UTR	isoQC +	chr3L	20480556	intergenic	not near genes	chr3L	20484359	3` UTR	ZnT77C -	chr3L_4_20480001	chr3L_20480001	RAL-642
806	chr3L	20852956	20852970	chr3L	20853258	20853271	INE-1	4	302	1.5	0.5	1.0	2.0	315	chr3L	20852956	intron	CG32432 -	chr3L	20853114	intron	CG32432 -	chr3L	20853271	intron	CG32432 -	chr3L_4_20850001	chr3L_20850001	RAL-642
807	chr3L	21014932	21014947	chr3L	21023395	21023427	Tirant	5	8471	3.5	1.0	2.2	1.6	8495	chr3L	21014932	intron	skd -	chr3L	21019180	intron	skd -	chr3L	21023427	intron	skd -	chr3L_5_21015001	chr3L_21015001	RAL-642
809	chr3L	21151870	21151896	chr3L	21156954	21156980	flea	5	5084	1.5	1.5	1.5	2.0	5110	chr3L	21151870	intron	Ac78C -	chr3L	21154425	intron	Ac78C -	chr3L	21156980	intron	Ac78C -	chr3L_5_21150001	chr3L_21150001	RAL-642
811	chr3L	21243748	21243767	chr3L	21251311	21251330	412	5	7563	1.0	4.0	2.5	1.4	7582	chr3L	21243748	intron	Eip78C +	chr3L	21247539	intron	Eip78C +	chr3L	21251330	intron	Eip78C +	chr3L_5_21245001	chr3L_21245001	RAL-642
817	chr3L	21498845	21498869	chr3L	21500470	21500505	1360	6	1631	2.5	3.0	2.8	1.6	1660	chr3L	21498845	intron	Glg1 -	chr3L	21499675	intron	Glg1 -	chr3L	21500505	intron	Glg1 -	chr3L_6_21495001	chr3L_21495001	RAL-642
821	chr3L	21749320	21749347	chr3L	21754480	21754499	Doc	7	5157	2.0	2.5	2.2	2.2	5179	chr3L	21749320	intron	Syn1 -	chr3L	21751910	intron	Syn1 -	chr3L	21754499	intron	Syn1 -	chr3L_7_21750001	chr3L_21750001	RAL-642
833	chr3L	22577628	22577642	chr3L	22582416	22582430	Doc	8	4787	6.0	5.5	5.8	1.2	4802	chr3L	22577628	intergenic	not near genes	chr3L	22580029	intergenic	not near genes	chr3L	22582430	3` UTR	CG14459 -	chr3L_8_22580001	chr3L_22580001	RAL-642
838	chr3L	24168794	24168803	chr3L	24176119	24176120	ZAM	4	7324	5.5	2.5	4.0	0.8	7326	chr3L	24168794	intron	Snap25 +	chr3L	24172457	intron	Snap25 +	chr3L	24176120	intron	Snap25 +	chr3L_4_24170001	chr3L_24170001	RAL-642
844	chr3R	4408411	4408442	chr3R	4412715	4412746	Juan	9	4301	1.5	2.0	1.8	3.2	4335	chr3R	4408411	intron	CG32944 -	chr3R	4410578	intron	CG32944 -	chr3R	4412746	intron	CG32944 -	chr3R_9_4410001	chr3R_4410001	RAL-642
845	chr3R	4609545	4609579	chr3R	4610709	4610743	1360	12	1164	2.5	1.0	1.8	4.3	1198	chr3R	4609545	intergenic	not near genes	chr3R	4610144	intergenic	not near genes	chr3R	4610743	intergenic	not near genes	chr3R_12_4610001	chr3R_4610001	RAL-642
848	chr3R	4759731	4759744	chr3R	4761224	4761241	hopper2	5	1496	4.0	6.0	5.0	0.8	1510	chr3R	4759731	intron,intron	atms +,CG44098 -	chr3R	4760486	intron,intron	atms +,CG44098 -	chr3R	4761241	intron,intron	atms +,CG44098 -	chr3R_5_4760001	chr3R_4760001	RAL-642
850	chr3R	4887485	4887503	chr3R	4894862	4894880	rover	6	7376	5.0	7.5	6.2	0.8	7395	chr3R	4887485	intergenic	not near genes	chr3R	4891182	intergenic	not near genes	chr3R	4894880	intergenic	not near genes	chr3R_6_4890001	chr3R_4890001	RAL-642
851	chr3R	5067980	5068014	chr3R	5073497	5073531	mdg3	5	5516	3.0	3.0	3.0	1.2	5551	chr3R	5067980	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073531	intergenic	not near genes	chr3R_5_5070001	chr3R_5070001	RAL-642
852	chr3R	5338395	5338421	chr3R	5343571	5343598	Rt1c	4	5177	2.5	4.5	3.5	0.9	5203	chr3R	5338395	intron	mtd -	chr3R	5340996	intron	mtd -	chr3R	5343598	intron	mtd -	chr3R_4_5340001	chr3R_5340001	RAL-642
854	chr3R	5445970	5445983	chr3R	5452430	5452443	Burdock	4	6460	1.0	1.5	1.2	1.8	6473	chr3R	5445970	intron	CG14669 +	chr3R	5449206	intron	CG14669 +	chr3R	5452443	intron	CG14669 +	chr3R_4_5445001	chr3R_5445001	RAL-642
857	chr3R	5746030	5746046	chr3R	5746261	5746287	pogo	6	238	3.5	5.0	4.2	1.2	257	chr3R	5746030	3` UTR	Madm +	chr3R	5746158	3` UTR	Madm +	chr3R	5746287	3` UTR	Madm +	chr3R_6_5745001	chr3R_5745001	RAL-642
859	chr3R	5809116	5809145	chr3R	5809357	5809386	pogo	4	240	2.5	1.0	1.8	1.4	270	chr3R	5809116	3` UTR	CG11000 +	chr3R	5809251	3` UTR	CG11000 +	chr3R	5809386	3` UTR	CG11000 +	chr3R_4_5805001	chr3R_5805001	RAL-642
860	chr3R	5927566	5927588	chr3R	5927802	5927827	pogo	8	238	0.5	1.5	1.0	4.0	261	chr3R	5927566	intron	CG34113 -	chr3R	5927696	intron	CG34113 -	chr3R	5927827	intron	CG34113 -	chr3R_8_5925001	chr3R_5925001	RAL-642
862	chr3R	6015963	6015990	chr3R	6024442	6024470	Tirant	8	8480	2.5	2.0	2.2	2.5	8507	chr3R	6015963	intergenic	not near genes	chr3R	6020216	intergenic	not near genes	chr3R	6024470	intergenic	not near genes	chr3R_8_6020001	chr3R_6020001	RAL-642
864	chr3R	6158510	6158540	chr3R	6167093	6167123	Tirant	6	8583	3.5	2.5	3.0	1.5	8613	chr3R	6158510	intergenic	not near genes	chr3R	6162816	intergenic	not near genes	chr3R	6167123	intergenic	CG1077 +	chr3R_6_6160001	chr3R_6160001	RAL-642
865	chr3R	6206286	6206318	chr3R	6206502	6206535	BS	8	214	2.5	2.0	2.2	2.5	249	chr3R	6206286	exon	Osi24 +	chr3R	6206410	intron	Osi24 +	chr3R	6206535	intron	Osi24 +	chr3R_8_6205001	chr3R_6205001	RAL-642
870	chr3R	6737498	6737523	chr3R	6739285	6739310	Doc	5	1785	3.5	0.5	2.0	1.7	1812	chr3R	6737498	intron	pb -	chr3R	6738404	intron	pb -	chr3R	6739310	intron	pb -	chr3R_5_6735001	chr3R_6735001	RAL-642
886	chr3R	7849646	7849671	chr3R	7850813	7850835	1360	7	1167	1.0	4.0	2.5	2.0	1189	chr3R	7849646	intron	CG34384 +	chr3R	7850240	intron	CG34384 +	chr3R	7850835	intron	CG34384 +	chr3R_7_7850001	chr3R_7850001	RAL-642
889	chr3R	7973312	7973347	chr3R	7974374	7974411	1360	5	1063	1.0	1.5	1.2	2.3	1099	chr3R	7973312	intergenic	not near genes	chr3R	7973862	intergenic	not near genes	chr3R	7974411	3` UTR	CD98hc -	chr3R_5_7970001	chr3R_7970001	RAL-642
891	chr3R	8094422	8094440	chr3R	8099727	8099744	Transpac	5	5305	1.0	1.5	1.2	2.3	5322	chr3R	8094422	intron	CG7900 +	chr3R	8097083	intron	CG7900 +	chr3R	8099744	intron	CG7900 +	chr3R_5_8095001	chr3R_8095001	RAL-642
892	chr3R	8101770	8101774	chr3R	8104852	8104858	G2	6	3083	5.0	3.5	4.2	1.2	3088	chr3R	8101770	exon	CG7900 +	chr3R	8103314	intron	CG7900 +	chr3R	8104858	3` UTR	CG7900 +	chr3R_6_8100001	chr3R_8100001	RAL-642
893	chr3R	8101775	8101781	chr3R	8104846	8104865	G2	4	3079	4.0	3.5	3.8	0.8	3090	chr3R	8101775	exon	CG7900 +	chr3R	8103320	intron	CG7900 +	chr3R	8104865	3` UTR	CG7900 +	chr3R_4_8100001	chr3R_8100001	RAL-642
899	chr3R	8403009	8403040	chr3R	8412171	8412206	roo	12	9164	2.5	5.5	4.0	2.4	9197	chr3R	8403009	intron	CG45263 -	chr3R	8407608	intron	CG45263 -	chr3R	8412206	intron	CG45263 -	chr3R_12_8405001	chr3R_8405001	RAL-642
902	chr3R	8570480	8570509	chr3R	8575116	8575145	HMS-Beagle	11	4636	4.0	3.5	3.8	2.3	4665	chr3R	8570480	intergenic	not near genes	chr3R	8572812	intergenic	not near genes	chr3R	8575145	intergenic	not near genes	chr3R_11_8570001	chr3R_8570001	RAL-642
904	chr3R	8601775	8601799	chr3R	8610928	8610951	roo	5	9147	1.5	1.5	1.5	2.0	9176	chr3R	8601775	intron	5-HT2B +	chr3R	8606363	intron	5-HT2B +	chr3R	8610951	intron	5-HT2B +	chr3R_5_8605001	chr3R_8605001	RAL-642
906	chr3R	8707364	8707380	chr3R	8709805	8709821	jockey	9	2439	0.5	3.5	2.0	3.0	2457	chr3R	8707364	intergenic	not near genes	chr3R	8708592	intergenic	not near genes	chr3R	8709821	intergenic	not near genes	chr3R_9_8705001	chr3R_8705001	RAL-642
915	chr3R	9319586	9319605	chr3R	9320020	9320038	jockey	5	434	0.5	5.0	2.8	1.3	452	chr3R	9319586	intron	CG8861 -	chr3R	9319812	intron	CG8861 -	chr3R	9320038	intron	CG8861 -	chr3R_5_9315001	chr3R_9315001	RAL-642
926	chr3R	10231789	10231814	chr3R	10237366	10237391	mdg3	5	5577	0.5	2.0	1.2	2.3	5602	chr3R	10231789	intron	CG42795 +	chr3R	10234590	intron	CG42795 +	chr3R	10237391	intron	CG42795 +	chr3R_5_10230001	chr3R_10230001	RAL-642
944	chr3R	11841062	11841096	chr3R	11846250	11846287	BS	6	5190	1.5	2.5	2.0	2.0	5225	chr3R	11841062	intron	CG6959 -	chr3R	11843674	intron	CG6959 -	chr3R	11846287	intron	CG6959 -	chr3R_6_11840001	chr3R_11840001	RAL-642
957	chr3R	12920151	12920180	chr3R	12925354	12925383	copia	8	5202	1.5	2.5	2.0	2.7	5232	chr3R	12920151	intron	beat-Vb +	chr3R	12922767	intron	beat-Vb +	chr3R	12925383	intron	beat-Vb +	chr3R_8_12920001	chr3R_12920001	RAL-642
960	chr3R	13143055	13143066	chr3R	13148617	13148642	mdg3	5	5568	3.5	2.5	3.0	1.2	5587	chr3R	13143055	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145848	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148642	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_5_13145001	chr3R_13145001	RAL-642
976	chr3R	14246413	14246418	chr3R	14247893	14247906	jockey	4	1484	4.0	2.0	3.0	1.0	1493	chr3R	14246413	intergenic	not near genes	chr3R	14247160	intergenic	not near genes	chr3R	14247906	intergenic	not near genes	chr3R_4_14245001	chr3R_14245001	RAL-642
993	chr3R	15601164	15601196	chr3R	15608685	15608718	412	12	7519	3.5	1.0	2.2	3.8	7554	chr3R	15601164	intergenic	not near genes	chr3R	15604941	intergenic	not near genes	chr3R	15608718	intergenic	not near genes	chr3R_12_15600001	chr3R_15600001	RAL-642
994	chr3R	15618731	15618764	chr3R	15626205	15626237	blood	9	7473	0.0	3.0	1.5	3.6	7506	chr3R	15618731	intergenic	not near genes	chr3R	15622484	intergenic	not near genes	chr3R	15626237	intergenic	not near genes	chr3R_9_15620001	chr3R_15620001	RAL-642
1004	chr3R	16756327	16756346	chr3R	16762517	16762537	diver	6	6190	1.5	2.0	1.8	2.1	6210	chr3R	16756327	intron	bxd -	chr3R	16759432	intron	bxd -	chr3R	16762537	intron	bxd -	chr3R_6_16755001	chr3R_16755001	RAL-642
1009	chr3R	17294675	17294698	chr3R	17295102	17295125	BS	7	428	2.0	4.0	3.0	1.8	450	chr3R	17294675	intergenic	not near genes	chr3R	17294900	intergenic	not near genes	chr3R	17295125	intergenic	not near genes	chr3R_7_17290001	chr3R_17290001	RAL-642
1016	chr3R	17925855	17925886	chr3R	17927322	17927353	hobo	9	1466	2.0	8.0	5.0	1.5	1498	chr3R	17925855	intron	cpo +	chr3R	17926604	intron	cpo +	chr3R	17927353	intron	cpo +	chr3R_9_17925001	chr3R_17925001	RAL-642
1026	chr3R	18606513	18606532	chr3R	18610745	18610763	F-element	4	4232	2.0	1.5	1.8	1.4	4250	chr3R	18606513	intron,intron	qin +,CG14304 -	chr3R	18608638	intron,intron	qin +,CG14304 -	chr3R	18610763	intron,intron	qin +,CG14304 -	chr3R_4_18605001	chr3R_18605001	RAL-642
1044	chr3R	20156707	20156723	chr3R	20165859	20165892	roo	6	9163	2.0	2.5	2.2	1.9	9185	chr3R	20156707	intergenic	not near genes	chr3R	20161300	intergenic	not near genes	chr3R	20165892	intergenic	not near genes	chr3R_6_20160001	chr3R_20160001	RAL-642
1046	chr3R	20266517	20266546	chr3R	20272988	20273017	Burdock	8	6469	1.5	3.0	2.2	2.5	6500	chr3R	20266517	intron	cic +	chr3R	20269767	intron	cic +	chr3R	20273017	intron	cic +	chr3R_8_20265001	chr3R_20265001	RAL-642
1048	chr3R	20331003	20331028	chr3R	20331489	20331514	roo	5	486	2.5	1.0	1.8	1.8	511	chr3R	20331003	intergenic	Sirt2 +	chr3R	20331258	intergenic	Sirt2 +	chr3R	20331514	intergenic	not near genes	chr3R_5_20330001	chr3R_20330001	RAL-642
1050	chr3R	20506586	20506616	chr3R	20507389	20507419	BS	5	803	1.5	2.0	1.8	1.8	833	chr3R	20506586	intergenic	Or92a +	chr3R	20507002	intergenic	CG4288 -	chr3R	20507419	3` UTR	CG4288 -	chr3R_5_20505001	chr3R_20505001	RAL-642
1057	chr3R	20854486	20854512	chr3R	20859276	20859302	Doc	6	4789	9.0	4.0	6.5	0.8	4816	chr3R	20854486	intron	Ir93a -	chr3R	20856894	intron	Ir93a -	chr3R	20859302	exon	Ir93a -	chr3R_6_20855001	chr3R_20855001	RAL-642
1063	chr3R	21141673	21141707	chr3R	21150154	21150158	Tirant	4	8469	4.0	3.0	3.5	0.9	8485	chr3R	21141673	intron	SNF4Agamma +	chr3R	21145916	intron	SNF4Agamma +	chr3R	21150158	intron	SNF4Agamma +	chr3R_4_21145001	chr3R_21145001	RAL-642
1069	chr3R	21761130	21761154	chr3R	21768512	21768526	mdg1	9	7383	6.5	3.0	4.8	1.6	7396	chr3R	21761130	exon	CG42335 +	chr3R	21764828	intron	CG42335 +	chr3R	21768526	exon	CG42335 +	chr3R_9_21760001	chr3R_21760001	RAL-642
1077	chr3R	22450544	22450577	chr3R	22453184	22453217	NOF	13	2637	2.5	5.5	4.0	2.6	2673	chr3R	22450544	intron	CG34376 +	chr3R	22451880	intron	CG34376 +	chr3R	22453217	intron	CG34376 +	chr3R_13_22450001	chr3R_22450001	RAL-642
1096	chr3R	23558398	23558428	chr3R	23560179	23560180	Bari1	7	1777	1.0	2.0	1.5	2.8	1782	chr3R	23558398	intron	beat-IV +	chr3R	23559289	intron	beat-IV +	chr3R	23560180	intron	beat-IV +	chr3R_7_23555001	chr3R_23555001	RAL-642
1103	chr3R	24076916	24076948	chr3R	24078383	24078415	hobo	9	1466	3.0	1.0	2.0	3.0	1499	chr3R	24076916	intron	4EHP -	chr3R	24077666	intron	4EHP -	chr3R	24078415	intron	4EHP -	chr3R_9_24075001	chr3R_24075001	RAL-642
1104	chr3R	24207216	24207246	chr3R	24212292	24212322	flea	10	5076	8.0	3.5	5.8	1.5	5106	chr3R	24207216	intron	twin -	chr3R	24209769	intron	twin -	chr3R	24212322	intron	twin -	chr3R_10_24205001	chr3R_24205001	RAL-642
1109	chr3R	24493294	24493307	chr3R	24493513	24493536	BS	4	226	1.0	2.5	1.8	1.4	242	chr3R	24493294	intergenic	not near genes	chr3R	24493415	intergenic	not near genes	chr3R	24493536	intergenic	not near genes	chr3R_4_24490001	chr3R_24490001	RAL-642
1120	chr3R	25832704	25832719	chr3R	25841886	25841888	roo	5	9179	5.5	2.5	4.0	1.0	9184	chr3R	25832704	exon	alpha4GT2 +	chr3R	25837296	intron	alpha4GT2 +	chr3R	25841888	exon	alpha4GT2 +	chr3R_5_25835001	chr3R_25835001	RAL-642
1129	chr3R	26510524	26510534	chr3R	26519579	26519588	roo	4	9055	1.5	2.0	1.8	1.4	9064	chr3R	26510524	intron	plum -	chr3R	26515056	intron	plum -	chr3R	26519588	intron,5` UTR	plum -,CR45226 +	chr3R_4_26515001	chr3R_26515001	RAL-642
1132	chr3R	26642750	26642761	chr3R	26643141	26643155	jockey	4	393	2.5	1.0	1.8	1.4	405	chr3R	26642750	intergenic	not near genes	chr3R	26642952	intergenic	not near genes	chr3R	26643155	intergenic	not near genes	chr3R_4_26640001	chr3R_26640001	RAL-642
1135	chr3R	26810564	26810586	chr3R	26811049	26811071	roo	4	484	0.5	4.0	2.2	1.2	507	chr3R	26810564	intron	Tl +	chr3R	26810818	intron	Tl +	chr3R	26811071	intron	Tl +	chr3R_4_26810001	chr3R_26810001	RAL-642
1136	chr3R	27007410	27007428	chr3R	27016540	27016560	roo	4	9133	1.5	1.5	1.5	1.6	9150	chr3R	27007410	intron	RYa-R +	chr3R	27011985	intron	RYa-R +	chr3R	27016560	intron	RYa-R +	chr3R_4_27010001	chr3R_27010001	RAL-642
1139	chr3R	27140521	27140526	chr3R	27148131	27148136	412	6	7609	9.0	3.0	6.0	0.9	7615	chr3R	27140521	intron	CG6051 -	chr3R	27144328	intron	CG6051 -	chr3R	27148136	intron	CG6051 -	chr3R_6_27140001	chr3R_27140001	RAL-642
1140	chr3R	27140530	27140545	chr3R	27148129	27148144	412	8	7604	5.5	2.5	4.0	1.6	7614	chr3R	27140530	intron	CG6051 -	chr3R	27144337	intron	CG6051 -	chr3R	27148144	intron	CG6051 -	chr3R_8_27140001	chr3R_27140001	RAL-642
1152	chr3R	27862956	27862985	chr3R	27868261	27868285	Transpac	6	5304	2.0	1.0	1.5	2.4	5329	chr3R	27862956	intron	CG34353 -	chr3R	27865620	intron	CG34353 -	chr3R	27868285	intron	CG34353 -	chr3R_6_27865001	chr3R_27865001	RAL-642
1153	chr3R	27875706	27875729	chr3R	27882761	27882784	297	4	7054	3.0	2.5	2.8	1.1	7078	chr3R	27875706	intron	CG34353 -	chr3R	27879245	intron	CG34353 -	chr3R	27882784	intron	CG34353 -	chr3R_4_27875001	chr3R_27875001	RAL-642
1156	chr3R	28068492	28068527	chr3R	28073934	28073969	I-element	10	5442	0.5	4.5	2.5	2.9	5477	chr3R	28068492	intron	CG34362 +	chr3R	28071230	intron	CG34362 +	chr3R	28073969	intron	CG34362 +	chr3R_10_28070001	chr3R_28070001	RAL-642
1159	chr3R	28173672	28173701	chr3R	28181102	28181130	mdg1	5	7430	0.0	1.5	0.8	2.8	7458	chr3R	28173672	intron	CG34354 +	chr3R	28177401	intron	CG34354 +	chr3R	28181130	intron	CG34354 +	chr3R_5_28175001	chr3R_28175001	RAL-642
1161	chr3R	28253347	28253371	chr3R	28255857	28255881	jockey	9	2509	2.0	3.5	2.8	2.4	2534	chr3R	28253347	intergenic	not near genes	chr3R	28254614	intergenic	not near genes	chr3R	28255881	intergenic	not near genes	chr3R_9_28250001	chr3R_28250001	RAL-642
1168	chr3R	28792873	28792904	chr3R	28797968	28797993	jockey	10	5089	4.0	5.5	4.8	1.7	5120	chr3R	28792873	intergenic	not near genes	chr3R	28795433	intergenic	not near genes	chr3R	28797993	intergenic	not near genes	chr3R_10_28795001	chr3R_28795001	RAL-642
1173	chr3R	29079378	29079406	chr3R	29080750	29080778	NOF	6	1371	3.0	1.5	2.2	1.9	1400	chr3R	29079378	intron	CG11873 +	chr3R	29080078	intron	CG11873 +	chr3R	29080778	intron	CG11873 +	chr3R_6_29080001	chr3R_29080001	RAL-642
1182	chr3R	29406628	29406648	chr3R	29407898	29407903	jockey	7	1278	3.5	3.0	3.2	1.7	1275	chr3R	29406628	intron	Ptp99A +	chr3R	29407266	intron	Ptp99A +	chr3R	29407903	intron	Ptp99A +	chr3R_7_29405001	chr3R_29405001	RAL-642
1191	chr3R	29738263	29738298	chr3R	29739729	29739739	hobo	6	1461	2.0	1.5	1.8	2.1	1476	chr3R	29738263	intergenic	CG1969 +,CG7598 +	chr3R	29739001	intron	CG1969 +	chr3R	29739739	5` UTR	CG1969 +	chr3R_6_29735001	chr3R_29735001	RAL-642
1192	chr3R	29882022	29882041	chr3R	29891179	29891198	roo	6	9157	3.0	4.0	3.5	1.3	9176	chr3R	29882022	intron	CG31038 +	chr3R	29886610	intron	CG31038 +	chr3R	29891198	intron	CG31038 +	chr3R_6_29885001	chr3R_29885001	RAL-642
1197	chr3R	30084864	30084885	chr3R	30086331	30086351	hobo	6	1466	0.0	2.5	1.2	2.7	1487	chr3R	30084864	intron	sima +	chr3R	30085608	intron	sima +	chr3R	30086351	intron	sima +	chr3R_6_30085001	chr3R_30085001	RAL-642
1202	chr3R	30396225	30396233	chr3R	30404491	30404497	roo	5	8266	0.5	4.0	2.2	1.6	8272	chr3R	30396225	intergenic	not near genes	chr3R	30400361	intergenic	not near genes	chr3R	30404497	5` UTR	CR45570 +	chr3R_5_30400001	chr3R_30400001	RAL-642
1205	chr3R	30480487	30480509	chr3R	30482953	30482977	jockey	5	2468	2.0	5.0	3.5	1.1	2490	chr3R	30480487	intron	PH4alphaEFB +	chr3R	30481732	intron	PH4alphaEFB +	chr3R	30482977	intron	PH4alphaEFB +	chr3R_5_30480001	chr3R_30480001	RAL-642
1207	chr3R	30679520	30679548	chr3R	30686989	30687013	blood	8	7468	4.0	2.5	3.2	1.9	7493	chr3R	30679520	intergenic	not near genes	chr3R	30683266	intergenic	not near genes	chr3R	30687013	intergenic	not near genes	chr3R_8_30680001	chr3R_30680001	RAL-642
1209	chr3R	30818809	30818841	chr3R	30820374	30820406	1360	6	1565	1.5	3.0	2.2	1.9	1597	chr3R	30818809	intron	cindr +	chr3R	30819608	intron	cindr +	chr3R	30820406	intron	cindr +	chr3R_6_30815001	chr3R_30815001	RAL-642
1215	chr3R	31074242	31074261	chr3R	31081838	31081859	springer	6	7597	3.0	5.0	4.0	1.2	7617	chr3R	31074242	intron	Sox100B +	chr3R	31078050	intron	Sox100B +	chr3R	31081859	intron	Sox100B +	chr3R_6_31075001	chr3R_31075001	RAL-642
1218	chr3R	31413095	31413121	chr3R	31418289	31418318	copia	5	5195	3.0	1.0	2.0	1.7	5223	chr3R	31413095	intron	Gprk2 +	chr3R	31415706	intron	Gprk2 +	chr3R	31418318	intron	Gprk2 +	chr3R_5_31415001	chr3R_31415001	RAL-642
1222	chr3R	31691530	31691564	chr3R	31696296	31696305	Doc	13	4759	3.5	4.0	3.8	2.7	4775	chr3R	31691530	intergenic	not near genes	chr3R	31693918	intergenic	not near genes	chr3R	31696305	intergenic	not near genes	chr3R_13_31690001	chr3R_31690001	RAL-642
1225	chr4	671610	671627	chr4	680191	680210	Tirant	5	8583	1.5	1.5	1.5	2.0	8600	chr4	671610	intron	CG11360 +	chr4	675910	intron	CG11360 +	chr4	680210	intron	CG11360 +	chr4_5_675001	chr4_675001	RAL-642
1226	chrX	428425	428452	chrX	434610	434632	3S18	4	6184	1.5	1.0	1.2	1.8	6207	chrX	428425	intron	CG32816 -	chrX	431528	intron	CG32816 -	chrX	434632	intron	CG32816 -	chrX_4_430001	chrX_430001	RAL-642
1227	chrX	551433	551450	chrX	558995	559011	412	6	7560	3.5	5.0	4.2	1.2	7578	chrX	551433	intron	Appl +	chrX	555222	intron	Appl +	chrX	559011	intron	Appl +	chrX_6_555001	chrX_555001	RAL-642
1228	chrX	551452	551455	chrX	558982	559016	412	4	7552	3.5	2.5	3.0	1.0	7564	chrX	551452	intron	Appl +	chrX	555234	intron	Appl +	chrX	559016	intron	Appl +	chrX_4_555001	chrX_555001	RAL-642
1231	chrX	827599	827631	chrX	835391	835423	roo	6	7790	3.0	3.0	3.0	1.5	7824	chrX	827599	intron	CG43867 -	chrX	831511	intron	CG43867 -	chrX	835423	intron	CG43867 -	chrX_6_830001	chrX_830001	RAL-642
1232	chrX	906708	906727	chrX	908492	908516	S-element	5	1788	5.5	4.5	5.0	0.8	1808	chrX	906708	intron	CG43867 -	chrX	907612	intron	CG43867 -	chrX	908516	intron	CG43867 -	chrX_5_905001	chrX_905001	RAL-642
1240	chrX	1357778	1357808	chrX	1367948	1367978	Doc	6	10170	3.5	3.0	3.2	1.4	10200	chrX	1357778	intergenic	png -	chrX	1362878	intergenic	not near genes	chrX	1367978	intergenic	not near genes	chrX_6_1360001	chrX_1360001	RAL-642
1244	chrX	1627976	1628004	chrX	1635444	1635466	gtwin	7	7467	4.0	1.0	2.5	2.0	7490	chrX	1627976	intron,intron	Mur2B -,br +	chrX	1631721	intron,intron	Mur2B -,br +	chrX	1635466	intron,intron	Mur2B -,br +	chrX_7_1630001	chrX_1630001	RAL-642
1245	chrX	1954892	1954918	chrX	1962828	1962855	Stalker2	6	7931	3.0	2.5	2.8	1.6	7963	chrX	1954892	intron	Hr4 +	chrX	1958874	intron	Hr4 +	chrX	1962855	intron	Hr4 +	chrX_6_1955001	chrX_1955001	RAL-642
1247	chrX	2399853	2399867	chrX	2408190	2408196	roo	6	8344	6.0	3.0	4.5	1.1	8343	chrX	2399853	intergenic	not near genes	chrX	2404024	intergenic	not near genes	chrX	2408196	intergenic	not near genes	chrX_6_2400001	chrX_2400001	RAL-642
1251	chrX	3075649	3075666	chrX	3080955	3080972	Transpac	5	5306	0.5	1.5	1.0	2.5	5323	chrX	3075649	intron	kirre +	chrX	3078310	intron	kirre +	chrX	3080972	intron	kirre +	chrX_5_3075001	chrX_3075001	RAL-642
1254	chrX	3493095	3493116	chrX	3502251	3502274	roo	8	9157	3.5	1.5	2.5	2.3	9179	chrX	3493095	intron,intron	CR44999 +,Gas8 -	chrX	3497684	intron,intron	CR44999 +,Gas8 -	chrX	3502274	intron,intron	CR44999 +,Gas8 -	chrX_8_3495001	chrX_3495001	RAL-642
1255	chrX	3597548	3597580	chrX	3619716	3619744	roo	7	22167	2.5	1.5	2.0	2.3	22196	chrX	3597548	intron	AstA-R1 +	chrX	3608646	intron	AstA-R1 +	chrX	3619744	intron	AstA-R1 +	chrX_7_3605001	chrX_3605001	RAL-642
1256	chrX	3842325	3842353	chrX	3842566	3842594	pogo	5	241	2.5	3.5	3.0	1.2	269	chrX	3842325	intron	ec +	chrX	3842460	intron	ec +	chrX	3842594	intron	ec +	chrX_5_3840001	chrX_3840001	RAL-642
1267	chrX	4731813	4731853	chrX	4736906	4736908	jockey	6	5086	3.0	0.5	1.8	2.1	5095	chrX	4731813	intergenic	not near genes	chrX	4734360	intergenic	not near genes	chrX	4736908	intergenic	not near genes	chrX_6_4730001	chrX_4730001	RAL-642
1269	chrX	4763265	4763283	chrX	4763753	4763770	Stalker4	4	488	3.0	2.0	2.5	1.1	505	chrX	4763265	intergenic	not near genes	chrX	4763518	intergenic	not near genes	chrX	4763770	intergenic	not near genes	chrX_4_4760001	chrX_4760001	RAL-642
1270	chrX	4792382	4792405	chrX	4792815	4792838	jockey	9	432	3.0	5.5	4.2	1.7	456	chrX	4792382	intergenic	not near genes	chrX	4792610	intergenic	not near genes	chrX	4792838	intergenic	not near genes	chrX_9_4790001	chrX_4790001	RAL-642
1271	chrX	4827966	4828002	chrX	4835337	4835373	Stalker4	7	7360	2.0	3.0	2.5	2.0	7407	chrX	4827966	intergenic	not near genes	chrX	4831670	intergenic	not near genes	chrX	4835373	intergenic	not near genes	chrX_7_4830001	chrX_4830001	RAL-642
1273	chrX	5096276	5096304	chrX	5103839	5103868	springer	4	7564	3.0	1.5	2.2	1.2	7592	chrX	5096276	intron,intron	CG15465 +,rg +	chrX	5100072	intron,intron	CG15465 +,rg +	chrX	5103868	intron,intron	CG15465 +,rg +	chrX_4_5100001	chrX_5100001	RAL-642
1275	chrX	5338708	5338731	chrX	5339961	5339978	jockey	4	1250	1.5	4.0	2.8	1.1	1270	chrX	5338708	intergenic	not near genes	chrX	5339343	intergenic	not near genes	chrX	5339978	intergenic	SK +	chrX_4_5335001	chrX_5335001	RAL-642
1280	chrX	5884164	5884184	chrX	5884405	5884424	pogo	5	240	1.0	1.0	1.0	2.5	260	chrX	5884164	intron	CR45668 -	chrX	5884294	intron	CR45668 -	chrX	5884424	intron	CR45668 -	chrX_5_5880001	chrX_5880001	RAL-642
1285	chrX	6335215	6335243	chrX	6337725	6337753	Tirant	10	2510	0.5	2.0	1.2	4.5	2538	chrX	6335215	intergenic	not near genes	chrX	6336484	intergenic	not near genes	chrX	6337753	intergenic	CG3842 +	chrX_10_6335001	chrX_6335001	RAL-642
1286	chrX	6392878	6392902	chrX	6397634	6397667	Doc	12	4763	0.5	1.0	0.8	6.7	4789	chrX	6392878	intergenic	not near genes	chrX	6395272	intergenic	not near genes	chrX	6397667	intergenic	not near genes	chrX_12_6395001	chrX_6395001	RAL-642
1287	chrX	6562817	6562851	chrX	6571299	6571333	Tirant	10	8481	3.5	2.5	3.0	2.5	8516	chrX	6562817	intron	CG34417 +	chrX	6567075	intron	CG34417 +	chrX	6571333	intron	CG34417 +	chrX_10_6565001	chrX_6565001	RAL-642
1292	chrX	7023605	7023630	chrX	7030995	7031017	Tabor	5	7389	2.0	1.5	1.8	1.8	7412	chrX	7023605	intron	CG12541 -	chrX	7027311	intron	CG12541 -	chrX	7031017	intron	CG12541 -	chrX_5_7025001	chrX_7025001	RAL-642
1293	chrX	7125250	7125278	chrX	7134404	7134437	roo	7	9158	0.5	1.0	0.8	3.9	9187	chrX	7125250	intergenic	not near genes	chrX	7129844	intergenic	not near genes	chrX	7134437	intergenic	not near genes	chrX_7_7125001	chrX_7125001	RAL-642
1296	chrX	7702904	7702932	chrX	7703343	7703354	jockey	9	434	1.5	3.0	2.2	2.8	450	chrX	7702904	intron	CHES-1-like -	chrX	7703129	intron	CHES-1-like -	chrX	7703354	intron	CHES-1-like -	chrX_9_7700001	chrX_7700001	RAL-642
1297	chrX	7784234	7784241	chrX	7784536	7784543	jockey	4	302	0.0	4.0	2.0	1.3	309	chrX	7784234	intergenic	not near genes	chrX	7784388	intergenic	not near genes	chrX	7784543	intergenic	not near genes	chrX_4_7780001	chrX_7780001	RAL-642
1306	chrX	8922326	8922361	chrX	8922760	8922795	jockey	7	433	2.5	1.5	2.0	2.3	469	chrX	8922326	intron	rdgA +	chrX	8922560	intron	rdgA +	chrX	8922795	intron	rdgA +	chrX_7_8920001	chrX_8920001	RAL-642
1308	chrX	9508140	9508162	chrX	9509658	9509678	jockey	4	1517	4.0	4.0	4.0	0.8	1538	chrX	9508140	intron	CG32700 -	chrX	9508909	intron	CG32700 -	chrX	9509678	intron	CG32700 -	chrX_4_9505001	chrX_9505001	RAL-642
1315	chrX	10550855	10550888	chrX	10552322	10552354	hobo	12	1466	1.5	2.5	2.0	4.0	1499	chrX	10550855	intron	spri -	chrX	10551604	intron	spri -	chrX	10552354	intron	spri -	chrX_12_10550001	chrX_10550001	RAL-642
1317	chrX	10686060	10686073	chrX	10691193	10691210	roo	4	5136	0.0	1.0	0.5	2.7	5150	chrX	10686060	intron	X11Lbeta +	chrX	10688635	intron	X11Lbeta +	chrX	10691210	intron	X11Lbeta +	chrX_4_10685001	chrX_10685001	RAL-642
1324	chrX	11268569	11268587	chrX	11270057	11270078	hopper2	8	1489	2.5	0.0	1.2	3.6	1509	chrX	11268569	intron	CG44422 -	chrX	11269324	intron	CG44422 -	chrX	11270078	intron	CG44422 -	chrX_8_11265001	chrX_11265001	RAL-642
1325	chrX	11312073	11312091	chrX	11319408	11319430	Stalker2	5	7345	1.0	2.5	1.8	1.8	7357	chrX	11312073	intergenic	not near genes	chrX	11315752	intergenic	not near genes	chrX	11319430	intergenic	not near genes	chrX_5_11315001	chrX_11315001	RAL-642
1326	chrX	11633435	11633442	chrX	11640489	11640496	297	4	7054	2.0	4.0	3.0	1.0	7061	chrX	11633435	intron	Ptp10D +	chrX	11636966	intron	Ptp10D +	chrX	11640496	intron	Ptp10D +	chrX_4_11635001	chrX_11635001	RAL-642
1337	chrX	13429462	13429493	chrX	13430611	13430642	jockey	7	1149	1.0	0.5	0.8	3.9	1180	chrX	13429462	intergenic	not near genes	chrX	13430052	intergenic	not near genes	chrX	13430642	intergenic	not near genes	chrX_7_13430001	chrX_13430001	RAL-642
1342	chrX	14105028	14105054	chrX	14114172	14114197	roo	7	9145	3.5	4.5	4.0	1.4	9169	chrX	14105028	intergenic	not near genes	chrX	14109612	intergenic	not near genes	chrX	14114197	5` UTR	CR44657 +	chrX_7_14105001	chrX_14105001	RAL-642
1349	chrX	15413048	15413082	chrX	15417350	15417379	Juan	13	4299	2.5	3.5	3.0	3.2	4331	chrX	15413048	intron	Cngl -	chrX	15415214	intron	Cngl -	chrX	15417379	intron	Cngl -	chrX_13_15415001	chrX_15415001	RAL-642
1359	chrX	17556944	17556976	chrX	17557443	17557445	mdg1	4	491	2.5	4.0	3.2	1.0	501	chrX	17556944	intron	CG43658 -	chrX	17557194	intron	CG43658 -	chrX	17557445	intron	CG43658 -	chrX_4_17555001	chrX_17555001	RAL-642
1361	chrX	17792972	17792981	chrX	17796268	17796277	flea	5	3295	3.5	1.5	2.5	1.4	3305	chrX	17792972	intron	OdsH +	chrX	17794624	intron	OdsH +	chrX	17796277	intron	OdsH +	chrX_5_17790001	chrX_17790001	RAL-642
1363	chrX	18194065	18194099	chrX	18194600	18194634	BS	7	534	0.0	0.0	0.0	7.0	569	chrX	18194065	intron	Frq2 +	chrX	18194350	intron	Frq2 +	chrX	18194634	intron	Frq2 +	chrX_7_18190001	chrX_18190001	RAL-642
1373	chrX	19472139	19472157	chrX	19472700	19472727	jockey	5	562	1.5	4.5	3.0	1.2	588	chrX	19472139	intergenic	kek5 +	chrX	19472433	intergenic	not near genes	chrX	19472727	intergenic	not near genes	chrX_5_19470001	chrX_19470001	RAL-642
1383	chrX	20377326	20377349	chrX	20378789	20378816	hobo	10	1466	3.5	7.5	5.5	1.5	1490	chrX	20377326	intergenic	not near genes	chrX	20378071	intergenic	not near genes	chrX	20378816	intergenic	not near genes	chrX_10_20375001	chrX_20375001	RAL-642
1387	chrX	20940719	20940754	chrX	20942188	20942223	hobo	6	1469	3.0	2.0	2.5	1.7	1504	chrX	20940719	intergenic	not near genes	chrX	20941471	intergenic	not near genes	chrX	20942223	intergenic	not near genes	chrX_6_20940001	chrX_20940001	RAL-642
1389	chrX	21086130	21086152	chrX	21087159	21087181	jockey	4	1028	3.0	1.5	2.2	1.2	1051	chrX	21086130	intergenic	not near genes	chrX	21086656	intergenic	not near genes	chrX	21087181	intergenic	not near genes	chrX_4_21085001	chrX_21085001	RAL-642
1392	chrX	22522630	22522646	chrX	22525448	22525466	NOF	4	2820	4.5	1.5	3.0	1.0	2836	chrX	22522630	intron	CG17600 +	chrX	22524048	intron	CG17600 +	chrX	22525466	intron	CG17600 +	chrX_4_22520001	chrX_22520001	RAL-642
1395	chrX	22771517	22771535	chrX	22774808	22774813	297	5	3288	1.5	0.5	1.0	2.5	3296	chrX	22771517	intron	CR44997 +	chrX	22773165	intron	CR44997 +	chrX	22774813	intron	CR44997 +	chrX_5_22770001	chrX_22770001	RAL-642
1399	chrX	22996321	22996338	chrX	23003553	23003569	roo	6	7232	1.0	0.5	0.8	3.3	7248	chrX	22996321	intron,intron	stnA -,stnB -	chrX	22999945	intron,intron	stnA -,stnB -	chrX	23003569	intron,intron	stnA -,stnB -	chrX_6_22995001	chrX_22995001	RAL-642
1400	chrX	23036391	23036411	chrX	23037792	23037811	pogo	4	1401	2.0	1.5	1.8	1.4	1420	chrX	23036391	intron	CG12061 +	chrX	23037101	intron	CG12061 +	chrX	23037811	intron	CG12061 +	chrX_4_23035001	chrX_23035001	RAL-642