SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	522866	522940	roo	8	409	13	74	'6-7	66.85	1.7	4.8	intron	ush +	chr2L_13_520001	chr2L_520001	0.46	RAL-639
2	chr2L	1028153	1028208	I-element	8	5349	9	55	'7-2	60.72	4.2	1.7	intron	IA-2 -	chr2L_9_1025001	chr2L_1025001	0.78	RAL-639
3	chr2L	1295311	1295362	copia	4889	246	4	51	'2-2	67.41	5.9	0.6	3` UTR	robo3 +	chr2L_4_1295001	chr2L_1295001	0.50	RAL-639
4	chr2L	1369322	1369376	Quasimodo	7356	17	5	54	'2-3	65.60	2.1	1.6	intergenic	CG14346 +	chr2L_5_1365001	chr2L_1365001	0.40	RAL-639
5	chr2L	1786833	1786878	roo	8698	9070	11	45	'2-9	62.79	3.1	2.7	intergenic	not near genes	chr2L_11_1785001	chr2L_1785001	0.18	RAL-639
6	chr2L	1955803	1955870	mdg1	7447	7040	7	67	'5-2	59.33	4.0	1.4	intron	erm -	chr2L_7_1955001	chr2L_1955001	0.71	RAL-639
7	chr2L	2086052	2086107	412	23	494	11	55	'6-5	71.07	2.7	3.0	intron	dpr3 -	chr2L_11_2085001	chr2L_2085001	0.55	RAL-639
8	chr2L	2179049	2179074	Juan	35	7	5	25	'3-2	64.28	1.9	1.7	intergenic	aop -	chr2L_5_2175001	chr2L_2175001	0.60	RAL-639
9	chr2L	2274480	2274557	blood	374	1	15	77	'8-7	63.46	3.3	3.5	intron	CR43753 -	chr2L_15_2270001	chr2L_2270001	0.53	RAL-639
10	chr2L	2621550	2621581	BS	5070	5039	6	31	'3-3	62.44	1.1	2.9	intergenic	not near genes	chr2L_6_2620001	chr2L_2620001	0.50	RAL-639
11	chr2L	2700517	2700564	hobo	26	2937	6	47	'2-4	63.94	4.1	1.2	intron	CG31690 +	chr2L_6_2700001	chr2L_2700001	0.33	RAL-639
12	chr2L	2787407	2787477	copia	4869	245	5	70	'4-1	64.89	1.9	1.7	intron	Syt1 -	chr2L_5_2785001	chr2L_2785001	0.80	RAL-639
13	chr2L	3496995	3497059	roo	407	8680	16	64	'10-6	62.03	2.6	4.4	intron	tim -	chr2L_16_3495001	chr2L_3495001	0.62	RAL-639
14	chr2L	3640933	3640994	roo	8675	400	7	61	'5-2	64.22	1.1	3.3	intron	for -	chr2L_7_3640001	chr2L_3640001	0.71	RAL-639
15	chr2L	4426257	4426335	copia	4870	254	11	78	'8-3	68.42	3.3	2.6	intron	CG15431 -	chr2L_11_4425001	chr2L_4425001	0.73	RAL-639
16	chr2L	5090702	5090758	FB	5	16	12	56	'9-3	61.93	2.8	3.2	intron	pgant5 -	chr2L_12_5090001	chr2L_5090001	0.75	RAL-639
17	chr2L	5790879	5790925	FB	16	15	7	46	'2-5	62.23	1.5	2.8	intron	CG9171 -	chr2L_7_5790001	chr2L_5790001	0.29	RAL-639
18	chr2L	5983624	5983701	pogo	3	2097	4	77	'2-2	68.34	6.6	0.5	intron	eIF-4a +	chr2L_4_5980001	chr2L_5980001	0.50	RAL-639
19	chr2L	6118203	6118239	HMS-Beagle	6823	7028	9	36	'2-7	65.00	0.5	6.0	intron	stai +	chr2L_9_6115001	chr2L_6115001	0.22	RAL-639
20	chr2L	6278865	6278886	hobo	3	24	7	21	'4-3	58.51	7.5	0.8	intron	Ddr +	chr2L_7_6275001	chr2L_6275001	0.57	RAL-639
21	chr2L	7063626	7063704	copia	2	255	7	78	'5-2	61.65	1.9	2.4	intergenic	Mnn1 +,Sem1 +	chr2L_7_7060001	chr2L_7060001	0.71	RAL-639
22	chr2L	7255189	7255256	roo	12	407	14	67	'6-8	70.36	3.2	3.3	intergenic	Wnt4 -	chr2L_14_7255001	chr2L_7255001	0.43	RAL-639
23	chr2L	7590937	7590995	copia	4893	257	6	58	'2-4	71.55	4.6	1.1	intergenic	not near genes	chr2L_6_7590001	chr2L_7590001	0.33	RAL-639
24	chr2L	7674135	7674206	roo	400	8665	9	71	'1-8	61.92	3.8	1.9	intron,intron	Slob -,Myo28B1 +	chr2L_9_7670001	chr2L_7670001	0.11	RAL-639
25	chr2L	7691490	7691571	roo	8663	408	16	81	'6-10	68.00	4.0	3.2	exon	CG7025 -	chr2L_16_7690001	chr2L_7690001	0.38	RAL-639
26	chr2L	8665660	8665727	roo	394	8664	17	67	'7-10	68.02	4.3	3.2	intron	Sema-1a +	chr2L_17_8665001	chr2L_8665001	0.41	RAL-639
27	chr2L	8732193	8732250	pogo	11	2085	8	57	'4-4	67.79	4.9	1.4	intron	raw -	chr2L_8_8730001	chr2L_8730001	0.50	RAL-639
28	chr2L	8959916	8959966	Ivk	5084	5367	6	50	'2-4	62.34	1.4	2.5	3` UTR	CG9525 -	chr2L_6_8955001	chr2L_8955001	0.33	RAL-639
29	chr2L	9281107	9281177	hobo	4	2932	14	70	'5-9	63.53	4.0	2.8	intron	Ggamma30A +	chr2L_14_9280001	chr2L_9280001	0.36	RAL-639
30	chr2L	9290104	9290181	roo	3	408	13	77	'5-8	64.96	1.9	4.5	intron	Ggamma30A +	chr2L_13_9290001	chr2L_9290001	0.38	RAL-639
31	chr2L	9382001	9382033	F-element	39	6	7	32	'1-6	64.26	2.2	2.2	intron	Shawl -	chr2L_7_9380001	chr2L_9380001	0.14	RAL-639
32	chr2L	9810802	9810869	hobo	2708	5	11	67	'3-8	59.31	2.8	2.9	intron	nAChRalpha6 -	chr2L_11_9810001	chr2L_9810001	0.27	RAL-639
33	chr2L	10030480	10030543	hobo	7	2933	11	63	'7-4	58.44	4.5	2.0	intergenic	not near genes	chr2L_11_10030001	chr2L_10030001	0.64	RAL-639
34	chr2L	10122123	10122142	diver	220	201	7	19	'2-5	62.10	2.5	2.0	intron,intron	CG44153 -,CG34109 +	chr2L_7_10120001	chr2L_10120001	0.29	RAL-639
35	chr2L	10995636	10995682	roo	14	9052	9	46	'6-3	66.79	3.3	2.1	3` UTR	CG16833 +	chr2L_9_10995001	chr2L_10995001	0.67	RAL-639
36	chr2L	11528345	11528372	pogo	4	31	4	27	'2-2	70.05	3.9	0.8	intergenic	CG31705 -	chr2L_4_11525001	chr2L_11525001	0.50	RAL-639
37	chr2L	11556551	11556627	3S18	6100	5764	12	76	'4-8	61.72	1.5	4.8	intergenic	not near genes	chr2L_12_11555001	chr2L_11555001	0.33	RAL-639
38	chr2L	11581319	11581396	blood	3	376	19	77	'11-8	60.41	2.7	5.1	intergenic	not near genes	chr2L_19_11580001	chr2L_11580001	0.58	RAL-639
39	chr2L	11712508	11712535	jockey	4786	4759	7	27	'4-3	60.32	3.3	1.6	intergenic	not near genes	chr2L_7_11710001	chr2L_11710001	0.57	RAL-639
40	chr2L	11777464	11777543	HMS-Beagle	6799	248	12	79	'2-10	64.22	3.4	2.7	intergenic	not near genes	chr2L_12_11775001	chr2L_11775001	0.17	RAL-639
41	chr2L	11867304	11867368	BS	5081	5034	13	64	'4-9	58.93	4.1	2.5	intron	Pde1c -	chr2L_13_11865001	chr2L_11865001	0.31	RAL-639
42	chr2L	11934727	11934805	Tabor	7322	1	11	78	'8-3	62.41	2.4	3.2	exon	Or33a +	chr2L_11_11930001	chr2L_11930001	0.73	RAL-639
43	chr2L	12192375	12192458	roo	410	8663	23	83	'11-12	67.70	3.4	5.2	intron	aret +	chr2L_23_12190001	chr2L_12190001	0.48	RAL-639
44	chr2L	12335208	12335254	mdg1	404	7036	7	46	'3-4	58.96	2.6	1.9	intergenic	not near genes	chr2L_7_12335001	chr2L_12335001	0.43	RAL-639
45	chr2L	12455204	12455229	jockey	5	29	5	25	'3-2	62.62	5.3	0.8	intergenic	bun -	chr2L_5_12455001	chr2L_12455001	0.60	RAL-639
46	chr2L	12511507	12511608	copia	158	253	11	101	'5-6	62.64	1.6	4.2	intron	bun -	chr2L_11_12510001	chr2L_12510001	0.45	RAL-639
47	chr2L	12652233	12652248	pogo	17	10	5	15	'3-2	64.41	5.5	0.8	intergenic	not near genes	chr2L_5_12650001	chr2L_12650001	0.60	RAL-639
48	chr2L	12779571	12779647	hopper	1414	2	8	76	'3-5	64.73	1.5	3.2	intergenic	not near genes	chr2L_8_12775001	chr2L_12775001	0.38	RAL-639
49	chr2L	12959913	12960143	HMS-Beagle	6796	6959	5	230	'4-1	66.63	2.9	1.3	intergenic	not near genes	chr2L_5_12955001	chr2L_12955001	0.80	RAL-639
50	chr2L	13048342	13048404	roo	8679	404	9	62	'3-6	64.03	2.5	2.6	intron	CG9932 -	chr2L_9_13045001	chr2L_13045001	0.33	RAL-639
51	chr2L	13050364	13050390	hobo	1	27	15	26	'9-6	65.81	6.1	2.1	intron	CG9932 -	chr2L_15_13050001	chr2L_13050001	0.60	RAL-639
52	chr2L	13241032	13241105	mdg3	239	5253	10	73	'2-8	64.48	2.5	2.9	intron	CG5945 +	chr2L_10_13240001	chr2L_13240001	0.20	RAL-639
53	chr2L	13262082	13262150	Burdock	6381	4	15	68	'6-9	61.80	1.0	7.5	intron	CG44085 +	chr2L_15_13260001	chr2L_13260001	0.40	RAL-639
54	chr2L	13292960	13292981	X-element	4711	4694	5	21	'1-4	61.70	2.4	1.5	intron	CG31729 +	chr2L_5_13290001	chr2L_13290001	0.20	RAL-639
55	chr2L	13556283	13556363	HMS-Beagle	2	246	23	80	'14-9	64.06	5.7	3.4	intron	kuz +	chr2L_23_13555001	chr2L_13555001	0.61	RAL-639
56	chr2L	13575737	13575798	FB	2	5	8	61	'3-5	65.58	5.2	1.3	intron	kuz +	chr2L_8_13575001	chr2L_13575001	0.38	RAL-639
57	chr2L	13703924	13703957	mdg1	399	7051	6	33	'3-3	65.07	2.7	1.6	intron	CG31814 -	chr2L_6_13700001	chr2L_13700001	0.50	RAL-639
58	chr2L	14100634	14100664	hopper	1385	2	8	30	'2-6	65.00	2.8	2.1	intergenic	not near genes	chr2L_8_14100001	chr2L_14100001	0.25	RAL-639
59	chr2L	14195557	14195622	hobo	2932	5	11	65	'3-8	62.52	4.9	1.9	intron	Dyrk2 -	chr2L_11_14195001	chr2L_14195001	0.27	RAL-639
60	chr2L	14307279	14307357	pogo	2098	3	12	78	'4-8	67.31	3.0	3.0	intron	wb +	chr2L_12_14305001	chr2L_14305001	0.33	RAL-639
61	chr2L	14310387	14310448	roo	8676	404	14	61	'4-10	65.38	5.0	2.3	intron	wb +	chr2L_14_14310001	chr2L_14310001	0.29	RAL-639
62	chr2L	14400278	14400344	Max-element	8531	10	4	66	'2-2	56.86	6.2	0.6	intron	elB -	chr2L_4_14400001	chr2L_14400001	0.50	RAL-639
63	chr2L	14600498	14600515	pogo	2	19	8	17	'3-5	61.12	7.1	1.0	3` UTR	osp -	chr2L_8_14600001	chr2L_14600001	0.38	RAL-639
64	chr2L	14694262	14694340	412	494	3	19	78	'11-8	61.58	2.1	6.1	intergenic	not near genes	chr2L_19_14690001	chr2L_14690001	0.58	RAL-639
65	chr2L	14771049	14771116	copia	253	4880	4	67	'2-2	63.87	3.3	0.9	intergenic	not near genes	chr2L_4_14770001	chr2L_14770001	0.50	RAL-639
66	chr2L	15023960	15024043	roo	409	8662	10	83	'5-5	68.40	3.1	2.4	intron	GABA-B-R1 +	chr2L_10_15020001	chr2L_15020001	0.50	RAL-639
67	chr2L	15139369	15139398	roo	8690	8664	14	29	'6-8	64.38	3.5	3.1	intergenic	not near genes	chr2L_14_15135001	chr2L_15135001	0.43	RAL-639
68	chr2L	15213604	15213681	roo	410	8669	12	77	'5-7	71.96	1.9	4.1	intergenic	not near genes	chr2L_12_15210001	chr2L_15210001	0.42	RAL-639
69	chr2L	15974506	15974529	jockey	10	33	7	23	'3-4	60.40	2.3	2.1	intergenic	not near genes	chr2L_7_15970001	chr2L_15970001	0.43	RAL-639
70	chr2L	16101895	16101915	roo	411	9054	4	20	'3-1	69.00	3.8	0.8	intergenic	not near genes	chr2L_4_16100001	chr2L_16100001	0.75	RAL-639
71	chr2L	16130353	16130424	hobo	1	2933	14	71	'7-7	62.83	4.3	2.6	intergenic	not near genes	chr2L_14_16130001	chr2L_16130001	0.50	RAL-639
72	chr2L	16229978	16230004	hobo	32	6	7	26	'5-2	64.19	0.6	4.4	intergenic	not near genes	chr2L_7_16225001	chr2L_16225001	0.71	RAL-639
73	chr2L	17090849	17090875	pogo	2100	2074	5	26	'3-2	61.90	5.5	0.8	intergenic	not near genes	chr2L_5_17090001	chr2L_17090001	0.60	RAL-639
74	chr2L	17095449	17095522	hopper	1413	1414	9	73	'2-7	72.57	3.8	1.9	intergenic	not near genes	chr2L_9_17095001	chr2L_17095001	0.22	RAL-639
75	chr2L	17108312	17108440	copia	269	5	4	128	'1-3	68.87	1.4	1.7	intergenic	not near genes	chr2L_4_17105001	chr2L_17105001	0.25	RAL-639
76	chr2L	17576759	17576793	Juan	4191	16	4	34	'2-2	60.33	1.8	1.4	intergenic	not near genes	chr2L_4_17575001	chr2L_17575001	0.50	RAL-639
77	chr2L	17638429	17638457	R1A1-element	5335	5307	9	28	'3-6	61.16	4.7	1.6	intergenic	not near genes	chr2L_9_17635001	chr2L_17635001	0.33	RAL-639
78	chr2L	17965882	17965940	Juan	4202	4023	11	58	'6-5	67.48	3.1	2.7	exon,intron	btv -,CG5674 +	chr2L_11_17965001	chr2L_17965001	0.55	RAL-639
79	chr2L	18099653	18099721	roo	397	8665	14	68	'5-9	65.06	2.6	3.9	intergenic	not near genes	chr2L_14_18095001	chr2L_18095001	0.36	RAL-639
80	chr2L	18570483	18570548	FB	1	7	10	65	'5-5	66.22	0.9	5.3	intron	Pde11 -	chr2L_10_18570001	chr2L_18570001	0.50	RAL-639
81	chr2L	18579894	18579968	roo	8670	407	17	74	'8-9	70.90	1.7	6.3	intron	Pde11 -	chr2L_17_18575001	chr2L_18575001	0.47	RAL-639
82	chr2L	18734634	18734649	F-element	36	20	4	15	'1-3	57.69	5.5	0.6	intergenic	not near genes	chr2L_4_18730001	chr2L_18730001	0.25	RAL-639
83	chr2L	19129340	19129391	FB	17	9	8	51	'3-5	58.88	3.0	2.0	intergenic	l(2)37Cd +,Aats-asn -	chr2L_8_19125001	chr2L_19125001	0.38	RAL-639
84	chr2L	19248317	19248394	mdg1	420	3	12	77	'5-7	64.59	1.5	4.8	intergenic	not near genes	chr2L_12_19245001	chr2L_19245001	0.42	RAL-639
85	chr2L	19307346	19307412	mdg1	407	1	8	66	'5-3	64.45	3.5	1.8	intergenic	not near genes	chr2L_8_19305001	chr2L_19305001	0.62	RAL-639
86	chr2L	19371293	19371320	Bari1	6	33	6	27	'1-5	68.00	4.8	1.0	exon	CG17349 +	chr2L_6_19370001	chr2L_19370001	0.17	RAL-639
87	chr2L	19418009	19418036	jockey	9	11	12	27	'8-4	56.91	6.6	1.6	intron,exon	Pax -,Lectin-galC1 +	chr2L_12_19415001	chr2L_19415001	0.67	RAL-639
88	chr2L	20139892	20139974	flea	4755	5013	18	82	'10-8	70.54	3.3	4.2	intergenic	not near genes	chr2L_18_20135001	chr2L_20135001	0.56	RAL-639
89	chr2L	20227852	20227922	pogo	6	2096	12	70	'6-6	64.00	3.2	2.9	intergenic	not near genes	chr2L_12_20225001	chr2L_20225001	0.50	RAL-639
90	chr2L	20244167	20244199	Doc	3	33	8	32	'4-4	67.58	4.9	1.4	intergenic	not near genes	chr2L_8_20240001	chr2L_20240001	0.50	RAL-639
91	chr2L	20440288	20440351	copia	4885	254	4	63	'2-2	63.67	4.9	0.7	intron	CG31688 +	chr2L_4_20440001	chr2L_20440001	0.50	RAL-639
92	chr2L	20508446	20508498	Transpac	4919	5202	8	52	'7-1	65.63	2.0	2.7	intergenic	not near genes	chr2L_8_20505001	chr2L_20505001	0.88	RAL-639
93	chr2L	20542126	20542208	roo	412	2	12	82	'3-9	65.32	4.7	2.1	intergenic	not near genes	chr2L_12_20540001	chr2L_20540001	0.25	RAL-639
94	chr2L	20572361	20572441	Transpac	311	2	17	80	'10-7	66.12	4.4	3.1	intron	CR45347 +	chr2L_17_20570001	chr2L_20570001	0.59	RAL-639
95	chr2L	20609113	20609178	roo	8668	397	13	65	'9-4	63.59	4.6	2.3	intron	CR44909 -	chr2L_13_20605001	chr2L_20605001	0.69	RAL-639
96	chr2L	20641518	20641584	Quasimodo	5	7356	6	66	'4-2	64.34	2.5	1.7	3` UTR	Sfp38D +	chr2L_6_20640001	chr2L_20640001	0.67	RAL-639
97	chr2L	20795376	20795415	I-element	5214	5336	4	39	'3-1	58.51	0.5	2.7	intron	vari -	chr2L_4_20795001	chr2L_20795001	0.75	RAL-639
98	chr2L	20852096	20852155	3S18	5781	335	4	59	'3-1	63.12	4.6	0.7	intergenic	twit +	chr2L_4_20850001	chr2L_20850001	0.75	RAL-639
99	chr2L	21096299	21096381	copia	4869	257	7	82	'4-3	67.62	2.4	2.1	intron	CG12050 -	chr2L_7_21095001	chr2L_21095001	0.57	RAL-639
100	chr2L	21215288	21215346	BS	5081	4970	15	58	'3-12	55.60	3.1	3.7	intron	Atg18b -	chr2L_15_21215001	chr2L_21215001	0.20	RAL-639
101	chr2L	21324424	21324482	hopper	1398	4	9	58	'5-4	64.65	4.3	1.7	intergenic	not near genes	chr2L_9_21320001	chr2L_21320001	0.56	RAL-639
102	chr2L	21400558	21400642	roo	409	8661	12	84	'4-8	70.08	3.1	2.9	intergenic	not near genes	chr2L_12_21400001	chr2L_21400001	0.33	RAL-639
103	chr2L	21570237	21570257	Dm88	19	4359	5	20	'2-3	67.20	0.7	2.9	intergenic	not near genes	chr2L_5_21570001	chr2L_21570001	0.40	RAL-639
104	chr2L	21755909	21755969	copia	241	4875	8	60	'3-5	63.98	2.3	2.4	intron	step -	chr2L_8_21755001	chr2L_21755001	0.38	RAL-639
105	chr2L	21793453	21793531	3S18	339	1	10	78	'2-8	63.02	2.5	2.9	intron	CG31612 -	chr2L_10_21790001	chr2L_21790001	0.20	RAL-639
106	chr2L	22149074	22149144	pogo	2098	9	6	70	'4-2	64.90	1.6	2.3	intron	CG42748 +	chr2L_6_22145001	chr2L_22145001	0.67	RAL-639
107	chr2L	22340316	22340386	HMS-Beagle2	4	7189	18	70	'7-11	63.07	2.3	5.5	intron	CG17018 +	chr2L_18_22340001	chr2L_22340001	0.39	RAL-639
108	chr2R	330131	330200	HMS-Beagle2	7189	6	12	69	'5-7	69.63	2.0	4.0	intergenic	not near genes	chr2R_12_330001	chr2R_330001	0.42	RAL-639
109	chr2R	1000372	1000442	opus	7499	10	7	70	'4-3	66.72	1.6	2.7	intergenic	not near genes	chr2R_7_1000001	chr2R_1000001	0.57	RAL-639
110	chr2R	1320690	1320710	diver2	4896	349	5	20	'3-2	53.88	12.6	0.4	intergenic	not near genes	chr2R_5_1320001	chr2R_1320001	0.60	RAL-639
111	chr2R	1522953	1523055	FB	371	893	4	102	'1-3	67.33	5.0	0.7	intron	Maf1 -	chr2R_4_1520001	chr2R_1520001	0.25	RAL-639
112	chr2R	2318395	2318456	blood	19	7388	13	61	'7-6	64.39	3.8	2.7	intergenic	not near genes	chr2R_13_2315001	chr2R_2315001	0.54	RAL-639
113	chr2R	4297504	4297519	mdg1	12	7038	4	15	'3-1	58.85	13.4	0.3	intergenic	not near genes	chr2R_4_4295001	chr2R_4295001	0.75	RAL-639
114	chr2R	4887324	4887404	flea	250	4753	16	80	'3-13	65.94	3.3	3.7	intergenic	not near genes	chr2R_16_4885001	chr2R_4885001	0.19	RAL-639
115	chr2R	5173180	5173202	Stalker4	379	401	6	22	'4-2	63.33	2.3	1.8	intergenic	not near genes	chr2R_6_5170001	chr2R_5170001	0.67	RAL-639
116	chr2R	5468144	5468220	opus	7116	492	18	76	'13-5	67.10	3.0	4.5	intergenic	CG30440 -	chr2R_18_5465001	chr2R_5465001	0.72	RAL-639
117	chr2R	5532314	5532340	G4	3761	3723	6	26	'4-2	58.89	8.9	0.6	intron	CG30438 +	chr2R_6_5530001	chr2R_5530001	0.67	RAL-639
118	chr2R	5701513	5701577	S-element	1700	4	4	64	'1-3	72.34	0.9	2.1	intergenic	not near genes	chr2R_4_5700001	chr2R_5700001	0.25	RAL-639
119	chr2R	6007539	6007616	copia	4869	253	4	77	'3-1	68.23	5.8	0.6	intron	Src42A +	chr2R_4_6005001	chr2R_6005001	0.75	RAL-639
120	chr2R	6017681	6017733	P-element	2869	2881	6	52	'3-3	45.78	3.4	1.4	intergenic	Pngl +	chr2R_6_6015001	chr2R_6015001	0.50	RAL-639
121	chr2R	6220494	6220618	P-element	2	2810	7	124	'6-1	43.22	3.4	1.6	intron	bin3 +	chr2R_7_6220001	chr2R_6220001	0.86	RAL-639
122	chr2R	6493154	6493174	transib2	2797	7	7	20	'4-3	61.78	2.1	2.3	intergenic	not near genes	chr2R_7_6490001	chr2R_6490001	0.57	RAL-639
123	chr2R	6819224	6819297	pogo	6	2098	7	73	'4-3	63.55	3.0	1.8	intergenic	not near genes	chr2R_7_6815001	chr2R_6815001	0.57	RAL-639
124	chr2R	7313444	7313474	412	7546	7518	11	30	'6-5	60.13	6.2	1.5	3` UTR	CG12164 +	chr2R_11_7310001	chr2R_7310001	0.55	RAL-639
125	chr2R	7381984	7382041	P-element	2871	2886	13	57	'8-5	45.07	3.9	2.7	intergenic	Dscam1 -,cos -	chr2R_13_7380001	chr2R_7380001	0.62	RAL-639
126	chr2R	7838359	7838425	Tabor	6856	488	10	66	'4-6	60.72	2.2	3.1	intron	Dgk -	chr2R_10_7835001	chr2R_7835001	0.40	RAL-639
127	chr2R	8146509	8146582	roo	8664	402	22	73	'14-8	64.65	4.4	4.1	intron	Lpin -	chr2R_22_8145001	chr2R_8145001	0.64	RAL-639
128	chr2R	8179298	8179370	copia	255	8	9	72	'4-5	66.18	4.6	1.6	intron	LRP1 +	chr2R_9_8175001	chr2R_8175001	0.44	RAL-639
129	chr2R	8193066	8193092	F-element	12	37	4	26	'3-1	65.90	5.2	0.6	intron	LRP1 +	chr2R_4_8190001	chr2R_8190001	0.75	RAL-639
130	chr2R	8462698	8462772	P-element	2885	2886	27	74	'15-12	49.37	2.0	9.0	intergenic	Mal-A5 +	chr2R_27_8460001	chr2R_8460001	0.56	RAL-639
131	chr2R	9041821	9041841	pogo	12	33	4	20	'2-2	65.42	9.8	0.4	intron	Ance-4 -	chr2R_4_9040001	chr2R_9040001	0.50	RAL-639
132	chr2R	9266998	9267062	1360	5	3379	15	64	'10-5	66.43	1.9	5.2	intron	Pkn -	chr2R_15_9265001	chr2R_9265001	0.67	RAL-639
133	chr2R	9408184	9408226	FB	9	24	6	42	'3-3	66.28	3.2	1.4	intron	wun -	chr2R_6_9405001	chr2R_9405001	0.50	RAL-639
134	chr2R	9504521	9504537	Rt1b	5131	5147	5	16	'3-2	63.20	3.5	1.1	intron	brp +	chr2R_5_9500001	chr2R_9500001	0.60	RAL-639
135	chr2R	9527797	9527876	roo	407	8664	15	79	'6-9	73.06	3.1	3.7	intron	brp +	chr2R_15_9525001	chr2R_9525001	0.40	RAL-639
136	chr2R	9684747	9684793	Juan	4038	4204	4	46	'3-1	62.84	2.0	1.3	intergenic	not near genes	chr2R_4_9680001	chr2R_9680001	0.75	RAL-639
137	chr2R	10112401	10112479	pogo	2	2098	13	78	'8-5	60.55	2.2	4.1	intron	Pfk +	chr2R_13_10110001	chr2R_10110001	0.62	RAL-639
138	chr2R	10279121	10279191	P-element	5	2885	9	70	'4-5	54.06	2.9	2.3	intron	CAP +	chr2R_9_10275001	chr2R_10275001	0.44	RAL-639
139	chr2R	10708018	10708087	roo	402	8669	9	69	'4-5	66.08	2.8	2.4	exon	stan +	chr2R_9_10705001	chr2R_10705001	0.44	RAL-639
140	chr2R	10712268	10712330	copia	14	251	5	62	'3-2	64.78	8.5	0.5	exon	stan +	chr2R_5_10710001	chr2R_10710001	0.60	RAL-639
141	chr2R	10874702	10874770	P-element	3	1	11	68	'4-7	49.24	5.1	1.8	5` UTR	CG30015 -	chr2R_11_10870001	chr2R_10870001	0.36	RAL-639
142	chr2R	11384713	11384759	I-element	15	5347	8	46	'5-3	65.69	4.3	1.5	intergenic	sprt -	chr2R_8_11380001	chr2R_11380001	0.62	RAL-639
143	chr2R	11415520	11415546	297	6581	6606	5	26	'2-3	65.79	5.2	0.8	intron	Drip -	chr2R_5_11415001	chr2R_11415001	0.40	RAL-639
144	chr2R	11418671	11418699	297	6948	395	9	28	'4-5	68.43	4.1	1.8	intron	Drip -	chr2R_9_11415001	chr2R_11415001	0.44	RAL-639
145	chr2R	11635496	11635547	Ivk	1	5364	9	51	'7-2	61.93	4.9	1.5	intron	CG9005 -	chr2R_9_11635001	chr2R_11635001	0.78	RAL-639
146	chr2R	11829092	11829149	Juan	4214	10	5	57	'2-3	55.74	5.6	0.8	exon	Sobp -	chr2R_5_11825001	chr2R_11825001	0.40	RAL-639
147	chr2R	11898847	11898916	pogo	2098	6	10	69	'5-5	68.81	3.4	2.3	intron	MCPH1 -	chr2R_10_11895001	chr2R_11895001	0.50	RAL-639
148	chr2R	12185328	12185405	accord	7382	2	19	77	'8-11	60.90	12.1	1.5	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_19_12185001	chr2R_12185001	0.42	RAL-639
149	chr2R	12442983	12443061	HMS-Beagle	248	6	18	78	'8-10	66.22	1.8	6.4	intron	Dyb +	chr2R_18_12440001	chr2R_12440001	0.44	RAL-639
150	chr2R	12463500	12463574	opus	3	498	25	74	'12-13	65.32	5.9	3.6	intron	Lac +	chr2R_25_12460001	chr2R_12460001	0.48	RAL-639
151	chr2R	12479058	12479101	FB	9	25	7	43	'5-2	67.18	2.0	2.3	intron	Dh44-R2 +	chr2R_7_12475001	chr2R_12475001	0.71	RAL-639
152	chr2R	12564675	12564735	pogo	15	2098	9	60	'4-5	66.86	3.1	2.2	exon	CG33775 -	chr2R_9_12560001	chr2R_12560001	0.44	RAL-639
153	chr2R	12845360	12845432	roo	400	8664	9	72	'4-5	64.23	5.2	1.5	intergenic	CG17575 -	chr2R_9_12845001	chr2R_12845001	0.44	RAL-639
154	chr2R	13248705	13248722	297	6581	17	5	17	'4-1	67.82	3.4	1.1	intron	Mp20 +	chr2R_5_13245001	chr2R_13245001	0.80	RAL-639
155	chr2R	13304936	13304999	pogo	2092	12	5	63	'2-3	66.85	0.7	2.9	intergenic	not near genes	chr2R_5_13300001	chr2R_13300001	0.40	RAL-639
156	chr2R	13849851	13849925	Max-element	5	301	4	74	'1-3	66.00	4.5	0.7	intergenic	CG30484 +,CG30485 +	chr2R_4_13845001	chr2R_13845001	0.25	RAL-639
157	chr2R	14025902	14025985	copia	258	4869	7	83	'2-5	68.31	5.5	1.1	intron	mam +	chr2R_7_14025001	chr2R_14025001	0.29	RAL-639
158	chr2R	14055689	14055771	HMS-Beagle	246	6796	9	82	'6-3	66.17	3.6	2.0	intron	mam +	chr2R_9_14055001	chr2R_14055001	0.67	RAL-639
159	chr2R	14686594	14686653	Quasimodo	7358	14	5	59	'2-3	73.07	1.6	1.9	intron	mspo -	chr2R_5_14685001	chr2R_14685001	0.40	RAL-639
160	chr2R	14848979	14849018	flea	4725	4687	11	39	'5-6	66.48	9.0	1.1	exon	SMC2 -	chr2R_11_14845001	chr2R_14845001	0.45	RAL-639
161	chr2R	15177077	15177155	gypsy	7446	1	20	78	'9-11	64.87	1.6	7.7	intron	igl +	chr2R_20_15175001	chr2R_15175001	0.45	RAL-639
162	chr2R	15510777	15510842	1360	3379	3	11	65	'4-7	65.34	5.1	1.8	intergenic	not near genes	chr2R_11_15510001	chr2R_15510001	0.36	RAL-639
163	chr2R	15722305	15722372	hopper	1414	1403	10	67	'9-1	63.34	5.5	1.5	intergenic	not near genes	chr2R_10_15720001	chr2R_15720001	0.90	RAL-639
164	chr2R	15726047	15726067	hopper	1387	8	4	20	'3-1	63.28	4.9	0.7	intergenic	not near genes	chr2R_4_15725001	chr2R_15725001	0.75	RAL-639
165	chr2R	15784756	15784809	Tirant	368	8107	8	53	'2-6	65.15	3.6	1.7	intron	Zasp52 -	chr2R_8_15780001	chr2R_15780001	0.25	RAL-639
166	chr2R	16124012	16124037	jockey	4790	4766	5	25	'3-2	63.29	3.4	1.1	intron	CG30095 +	chr2R_5_16120001	chr2R_16120001	0.60	RAL-639
167	chr2R	16520486	16520567	roo	8663	407	9	81	'7-2	65.15	2.0	3.0	intron	Sema-2a +	chr2R_9_16520001	chr2R_16520001	0.78	RAL-639
168	chr2R	16521599	16521657	hopper	18	1411	11	58	'1-10	57.46	2.8	2.9	intron	Sema-2a +	chr2R_11_16520001	chr2R_16520001	0.09	RAL-639
169	chr2R	16610185	16610209	jockey	4670	4695	10	24	'4-6	58.75	5.4	1.6	intron	CG5065 +	chr2R_10_16610001	chr2R_16610001	0.40	RAL-639
170	chr2R	16874928	16874979	roo	8689	404	10	51	'2-8	65.96	1.8	3.6	3` UTR,3` UTR	CG6435 +,CG8910 -	chr2R_10_16870001	chr2R_16870001	0.20	RAL-639
171	chr2R	17358529	17358612	roo	410	8663	11	83	'6-5	66.26	3.0	2.8	intron	mbl +	chr2R_11_17355001	chr2R_17355001	0.55	RAL-639
172	chr2R	17459079	17459146	S-element	4	1705	4	67	'1-3	60.70	3.3	0.9	intron	CG14478 +	chr2R_4_17455001	chr2R_17455001	0.25	RAL-639
173	chr2R	17548193	17548250	P-element	3	18	6	57	'5-1	49.09	5.2	1.0	5` UTR	MESR4 +	chr2R_6_17545001	chr2R_17545001	0.83	RAL-639
174	chr2R	17756775	17756856	opus	7499	111	15	81	'11-4	70.76	3.2	3.6	intergenic	CG6385 -	chr2R_15_17755001	chr2R_17755001	0.73	RAL-639
175	chr2R	17760902	17760977	P-element	2885	2886	15	75	'6-9	53.44	3.7	3.2	intergenic	CG5009 +,HLH54F +	chr2R_15_17760001	chr2R_17760001	0.40	RAL-639
176	chr2R	17803389	17803439	roo	8666	9045	6	50	'3-3	71.65	8.8	0.6	5` UTR	grh +	chr2R_6_17800001	chr2R_17800001	0.50	RAL-639
177	chr2R	17844370	17844387	roo	21	4	5	17	'1-4	64.17	1.9	1.7	5` UTR	olf186-F +	chr2R_5_17840001	chr2R_17840001	0.20	RAL-639
178	chr2R	17930224	17930293	Tabor	6848	7324	12	69	'8-4	63.14	4.1	2.4	intergenic	not near genes	chr2R_12_17930001	chr2R_17930001	0.67	RAL-639
179	chr2R	18148556	18148617	pogo	10	2090	9	61	'4-5	61.79	3.0	2.2	3` UTR	CG5742 -	chr2R_9_18145001	chr2R_18145001	0.44	RAL-639
180	chr2R	18391614	18391682	HMS-Beagle	7036	6801	31	68	'9-22	67.83	3.5	6.9	intergenic	not near genes	chr2R_31_18390001	chr2R_18390001	0.29	RAL-639
181	chr2R	18518340	18518420	roo	408	8662	31	80	'16-15	64.37	6.1	4.4	intron	CG43066 +	chr2R_31_18515001	chr2R_18515001	0.52	RAL-639
182	chr2R	18799471	18799531	P-element	2872	3	17	60	'10-7	42.32	3.8	3.5	intron	l(2)08717 -	chr2R_17_18795001	chr2R_18795001	0.59	RAL-639
183	chr2R	18807871	18807892	BS	5062	5084	4	21	'3-1	71.53	0.3	3.1	intergenic	CG15096 -	chr2R_4_18805001	chr2R_18805001	0.75	RAL-639
184	chr2R	18937298	18937357	mdg3	235	5263	11	59	'3-8	57.86	3.7	2.3	intron	sano +	chr2R_11_18935001	chr2R_18935001	0.27	RAL-639
185	chr2R	19004319	19004390	hobo	2936	4	17	71	'6-11	65.75	2.9	4.4	intron	tn +	chr2R_17_19000001	chr2R_19000001	0.35	RAL-639
186	chr2R	19145668	19145722	pogo	1	2076	13	54	'9-4	66.21	2.5	3.7	intron	ena +	chr2R_13_19145001	chr2R_19145001	0.69	RAL-639
187	chr2R	19253921	19254055	jockey	4665	4762	9	134	'1-8	64.48	1.8	3.2	intergenic	not near genes	chr2R_9_19250001	chr2R_19250001	0.11	RAL-639
188	chr2R	19337946	19337972	I-element	5324	10	6	26	'3-3	63.20	3.4	1.4	intron	Rgk1 -	chr2R_6_19335001	chr2R_19335001	0.50	RAL-639
189	chr2R	19456994	19457069	P-element	2886	2885	8	75	'4-4	55.25	3.7	1.7	intron,intron	mei-W68 +,par-1 +	chr2R_8_19455001	chr2R_19455001	0.50	RAL-639
190	chr2R	19931727	19931782	copia	19	249	6	55	'3-3	62.65	3.7	1.3	intergenic	not near genes	chr2R_6_19930001	chr2R_19930001	0.50	RAL-639
191	chr2R	20056071	20056149	Quasimodo	7364	1	10	78	'4-6	68.40	3.1	2.4	intergenic	not near genes	chr2R_10_20055001	chr2R_20055001	0.40	RAL-639
192	chr2R	20401536	20401589	297	6972	6607	4	53	'3-1	67.00	2.0	1.3	intergenic	not near genes	chr2R_4_20400001	chr2R_20400001	0.75	RAL-639
193	chr2R	21112273	21112334	copia	245	4876	6	61	'2-4	68.76	3.6	1.3	intron	ktub +	chr2R_6_21110001	chr2R_21110001	0.33	RAL-639
194	chr2R	21196738	21196816	Transpac	5226	1	16	78	'7-9	63.36	3.6	3.5	intron	Lapsyn +	chr2R_16_21195001	chr2R_21195001	0.44	RAL-639
195	chr2R	21368960	21369024	Tirant	13	393	14	64	'11-3	60.79	4.7	2.5	intron	cv-2 -	chr2R_14_21365001	chr2R_21365001	0.79	RAL-639
196	chr2R	21435507	21435579	hobo	2937	1	13	72	'5-8	63.01	4.3	2.5	intron	Sdc -	chr2R_13_21435001	chr2R_21435001	0.38	RAL-639
197	chr2R	21959577	21959662	copia	4869	105	7	85	'5-2	68.77	3.2	1.7	intergenic	not near genes	chr2R_7_21955001	chr2R_21955001	0.71	RAL-639
198	chr2R	22229565	22229593	jockey	37	9	9	28	'3-6	64.63	2.9	2.3	intergenic	not near genes	chr2R_9_22225001	chr2R_22225001	0.33	RAL-639
199	chr2R	22619628	22619657	jockey	4802	4772	8	29	'5-3	60.21	4.3	1.5	intron	CG33143 +	chr2R_8_22615001	chr2R_22615001	0.62	RAL-639
200	chr2R	22644563	22644635	pogo	3	2100	18	72	'11-7	68.95	3.0	4.5	intergenic	CG2852 -	chr2R_18_22640001	chr2R_22640001	0.61	RAL-639
201	chr2R	22950006	22950029	jockey	31	12	8	23	'3-5	60.83	4.9	1.4	intergenic	not near genes	chr2R_8_22950001	chr2R_22950001	0.38	RAL-639
202	chr2R	23244882	23244910	I-element	5350	5322	7	28	'2-5	69.07	1.2	3.2	5` UTR	yip3 -	chr2R_7_23240001	chr2R_23240001	0.29	RAL-639
203	chr2R	23409059	23409133	flea	5004	4754	10	74	'3-7	69.29	3.7	2.1	intergenic	not near genes	chr2R_10_23405001	chr2R_23405001	0.30	RAL-639
204	chr2R	23518139	23518216	HMS-Beagle	247	6801	14	77	'7-7	64.80	2.4	4.1	intergenic	not near genes	chr2R_14_23515001	chr2R_23515001	0.50	RAL-639
205	chr2R	24021564	24021637	pogo	1	2097	16	73	'10-6	69.47	3.9	3.3	intron	CG3907 -	chr2R_16_24020001	chr2R_24020001	0.62	RAL-639
206	chr2R	24290701	24290766	hobo	4	2930	10	65	'7-3	65.21	3.2	2.4	3` UTR	nvy +	chr2R_10_24290001	chr2R_24290001	0.70	RAL-639
207	chr2R	24470848	24470920	Burdock	250	6141	13	72	'7-6	69.18	2.8	3.4	intron	CG13579 +	chr2R_13_24470001	chr2R_24470001	0.54	RAL-639
208	chr2R	24739846	24739926	Stalker2	7248	7650	14	80	'8-6	61.24	3.6	3.0	intergenic	CR44828 -	chr2R_14_24735001	chr2R_24735001	0.57	RAL-639
209	chr2R	24884861	24884892	Max-element	305	8525	7	31	'3-4	60.29	22.5	0.3	intron	NKAIN +	chr2R_7_24880001	chr2R_24880001	0.43	RAL-639
210	chr2R	25032867	25032942	copia	4871	253	16	75	'10-6	67.83	3.8	3.3	intron	Nplp1 +	chr2R_16_25030001	chr2R_25030001	0.62	RAL-639
211	chr3L	70224	70295	297	6969	5	10	71	'8-2	67.63	2.9	2.6	intergenic	CR44511 -,CR44510 +	chr3L_10_70001	chr3L_70001	0.80	RAL-639
212	chr3L	493861	493938	opus	6	499	17	77	'4-13	63.72	4.3	3.2	intron	klar -	chr3L_17_490001	chr3L_490001	0.24	RAL-639
213	chr3L	559928	560004	flea	4764	257	5	76	'1-4	65.91	3.3	1.2	intron	hipk +	chr3L_5_555001	chr3L_555001	0.20	RAL-639
214	chr3L	708193	708253	P-element	2	9	6	60	'4-2	53.35	3.8	1.2	5` UTR	CG13895 -	chr3L_6_705001	chr3L_705001	0.67	RAL-639
215	chr3L	824314	824378	412	7531	3	9	64	'6-3	59.72	4.0	1.8	intergenic	not near genes	chr3L_9_820001	chr3L_820001	0.67	RAL-639
216	chr3L	870717	870800	297	6582	6973	4	83	'2-2	66.90	2.4	1.2	3` UTR	CG12502 +	chr3L_4_870001	chr3L_870001	0.50	RAL-639
217	chr3L	1189058	1189127	pogo	2087	1	5	69	'2-3	64.00	6.2	0.7	intergenic	not near genes	chr3L_5_1185001	chr3L_1185001	0.40	RAL-639
218	chr3L	1479205	1479256	copia	4873	251	8	51	'5-3	64.87	5.5	1.2	intron	stet -	chr3L_8_1475001	chr3L_1475001	0.62	RAL-639
219	chr3L	2315254	2315279	F-element	95	70	13	25	'5-8	62.10	2.5	3.7	intergenic	not near genes	chr3L_13_2315001	chr3L_2315001	0.38	RAL-639
220	chr3L	2426659	2426722	pogo	2100	20	7	63	'3-4	72.71	2.6	1.9	intron	CG45186 +	chr3L_7_2425001	chr3L_2425001	0.43	RAL-639
221	chr3L	3037666	3037737	pogo	2099	3	13	71	'4-9	60.92	5.1	2.1	intron	CG2162 +	chr3L_13_3035001	chr3L_3035001	0.31	RAL-639
222	chr3L	3346132	3346203	mdg3	5257	241	4	71	'2-2	64.33	4.3	0.8	intron	kst +	chr3L_4_3345001	chr3L_3345001	0.50	RAL-639
223	chr3L	3755966	3756034	hobo	2937	8	15	68	'8-7	65.54	4.8	2.6	intron	CG32264 -	chr3L_15_3755001	chr3L_3755001	0.53	RAL-639
224	chr3L	3931104	3931125	jockey	4680	4702	6	21	'3-3	57.65	4.8	1.0	intron	Eip63F-1 -	chr3L_6_3930001	chr3L_3930001	0.50	RAL-639
225	chr3L	4001511	4001580	hopper	5	7	11	69	'3-8	65.57	3.4	2.5	intergenic	not near genes	chr3L_11_4000001	chr3L_4000001	0.27	RAL-639
226	chr3L	5976285	5976315	hobo	1	20	12	30	'6-6	63.07	6.8	1.5	intergenic	CG10479 -	chr3L_12_5975001	chr3L_5975001	0.50	RAL-639
227	chr3L	5980320	5980352	hobo	2908	2938	9	32	'5-4	61.65	2.2	2.8	intergenic	not near genes	chr3L_9_5980001	chr3L_5980001	0.56	RAL-639
228	chr3L	6000081	6000155	hobo	1	2936	18	74	'10-8	59.47	3.4	4.1	intron	PVRAP +	chr3L_18_6000001	chr3L_6000001	0.56	RAL-639
229	chr3L	6013765	6013833	hobo	2935	5	16	68	'9-7	62.32	4.1	3.1	intron	PVRAP +	chr3L_16_6010001	chr3L_6010001	0.56	RAL-639
230	chr3L	6129710	6129733	jockey	4672	4692	6	23	'3-3	59.40	7.8	0.7	intergenic	not near genes	chr3L_6_6125001	chr3L_6125001	0.50	RAL-639
231	chr3L	6522184	6522204	Gypsy6A_LTR	391	372	5	20	'4-1	58.39	6.3	0.7	intron	sfl +	chr3L_5_6520001	chr3L_6520001	0.80	RAL-639
232	chr3L	6522229	6522256	gypsy6	7447	7420	11	27	'6-5	65.05	6.6	1.4	intron	sfl +	chr3L_11_6520001	chr3L_6520001	0.55	RAL-639
233	chr3L	6588315	6588370	roo	8673	394	10	55	'5-5	65.53	5.2	1.6	intron,intron	CG18769 +,jv -	chr3L_10_6585001	chr3L_6585001	0.50	RAL-639
234	chr3L	6590515	6590559	297	384	24	4	44	'3-1	68.24	0.0	4.0	intron	CG18769 +	chr3L_4_6590001	chr3L_6590001	0.75	RAL-639
235	chr3L	6628998	6629071	hobo	4	2938	18	73	'12-6	66.08	4.5	3.3	exon	GluRIA +	chr3L_18_6625001	chr3L_6625001	0.67	RAL-639
236	chr3L	7197138	7197181	Ivk	5371	23	5	43	'2-3	68.27	1.1	2.4	intergenic	not near genes	chr3L_5_7195001	chr3L_7195001	0.40	RAL-639
237	chr3L	7885378	7885398	pogo	9	29	4	20	'1-3	68.56	3.8	0.8	intron	CG32365 +	chr3L_4_7885001	chr3L_7885001	0.25	RAL-639
238	chr3L	7885568	7885628	Quasimodo	3	7349	4	60	'3-1	69.92	2.3	1.2	intron	CG32365 +	chr3L_4_7885001	chr3L_7885001	0.75	RAL-639
239	chr3L	8140238	8140299	pogo	2091	8	4	61	'2-2	62.93	3.8	0.8	intron	mus301 +	chr3L_4_8140001	chr3L_8140001	0.50	RAL-639
240	chr3L	8182088	8182172	Tirant	401	8107	16	84	'6-10	63.30	3.8	3.3	intron	CG7979 +	chr3L_16_8180001	chr3L_8180001	0.38	RAL-639
241	chr3L	8243040	8243084	roo	405	33	4	44	'3-1	69.34	9.2	0.4	intron	Dscam4 +	chr3L_4_8240001	chr3L_8240001	0.75	RAL-639
242	chr3L	8755152	8755242	roo	410	8670	11	90	'4-7	65.30	0.7	6.5	intron	Fhos +	chr3L_11_8755001	chr3L_8755001	0.36	RAL-639
243	chr3L	9041704	9041762	I-element	5344	2	10	58	'7-3	62.44	4.6	1.8	intron	Doc1 +	chr3L_10_9040001	chr3L_9040001	0.70	RAL-639
244	chr3L	9126554	9126621	hobo	4	2932	14	67	'12-2	60.51	2.3	4.2	intron	bol -	chr3L_14_9125001	chr3L_9125001	0.86	RAL-639
245	chr3L	9234726	9234792	pogo	7	2091	7	66	'5-2	63.24	4.0	1.4	intergenic	CG4483 -	chr3L_7_9230001	chr3L_9230001	0.71	RAL-639
246	chr3L	9421430	9421506	S-element	1714	1714	4	76	'2-2	60.33	2.7	1.1	intron	CG3967 -	chr3L_4_9420001	chr3L_9420001	0.50	RAL-639
247	chr3L	9442911	9442928	TAHRE	10075	10092	4	17	'2-2	64.64	7.5	0.5	intergenic	CG33926 +	chr3L_4_9440001	chr3L_9440001	0.50	RAL-639
248	chr3L	9522066	9522116	Transpac	295	4918	5	50	'1-4	63.88	2.9	1.3	intron	CG33700 -	chr3L_5_9520001	chr3L_9520001	0.20	RAL-639
249	chr3L	9693136	9693218	roo	8663	409	20	82	'6-14	68.98	3.6	4.3	intron	CG6767 -	chr3L_20_9690001	chr3L_9690001	0.30	RAL-639
250	chr3L	9760102	9760160	springer	6	369	9	58	'3-6	61.74	4.3	1.7	intron	CG42268 -	chr3L_9_9760001	chr3L_9760001	0.33	RAL-639
251	chr3L	10130512	10130554	Max-element	291	8242	12	42	'7-5	61.00	2.5	3.4	intron	dpr6 +	chr3L_12_10130001	chr3L_10130001	0.58	RAL-639
252	chr3L	10469346	10469421	springer	7	7521	6	75	'4-2	64.42	3.8	1.2	intergenic	not near genes	chr3L_6_10465001	chr3L_10465001	0.67	RAL-639
253	chr3L	10477529	10477610	copia	4865	242	7	81	'6-1	63.94	2.2	2.2	intergenic	not near genes	chr3L_7_10475001	chr3L_10475001	0.86	RAL-639
254	chr3L	10542527	10542568	hopper	1403	28	6	41	'5-1	65.01	1.2	2.7	intron	A2bp1 +	chr3L_6_10540001	chr3L_10540001	0.83	RAL-639
255	chr3L	10694223	10694298	pogo	7	2099	8	75	'4-4	67.11	2.6	2.2	intergenic	CG6463 -,NijA -	chr3L_8_10690001	chr3L_10690001	0.50	RAL-639
256	chr3L	11196311	11196382	FB	4	2	7	71	'5-2	64.11	2.6	1.9	intron	GlcAT-P -	chr3L_7_11195001	chr3L_11195001	0.71	RAL-639
257	chr3L	11437026	11437099	roo	404	3	9	73	'4-5	62.81	1.6	3.5	intergenic	not near genes	chr3L_9_11435001	chr3L_11435001	0.44	RAL-639
258	chr3L	11624322	11624383	pogo	3	2081	4	61	'2-2	65.33	3.4	0.9	exon	CG6084 -	chr3L_4_11620001	chr3L_11620001	0.50	RAL-639
259	chr3L	11967340	11967396	pogo	2095	22	4	56	'2-2	70.33	1.9	1.4	intergenic	Muc68E -	chr3L_4_11965001	chr3L_11965001	0.50	RAL-639
260	chr3L	12127552	12127630	diver	227	9	8	78	'4-4	54.17	2.8	2.1	intergenic	Ir68b -,CG34241 +	chr3L_8_12125001	chr3L_12125001	0.50	RAL-639
261	chr3L	12127859	12127908	hobo	2	2912	8	49	'5-3	69.00	1.5	3.2	intergenic	CG34241 +,Ir68b -	chr3L_8_12125001	chr3L_12125001	0.62	RAL-639
262	chr3L	12227629	12227706	blood	7013	375	15	77	'9-6	67.48	5.1	2.5	intron	app -	chr3L_15_12225001	chr3L_12225001	0.60	RAL-639
263	chr3L	12300118	12300149	1360	3	34	10	31	'6-4	64.96	5.3	1.6	intergenic	not near genes	chr3L_10_12300001	chr3L_12300001	0.60	RAL-639
264	chr3L	12312563	12312618	roo	19	402	6	55	'3-3	66.26	1.3	2.6	intergenic	not near genes	chr3L_6_12310001	chr3L_12310001	0.50	RAL-639
265	chr3L	12931318	12931392	hobo	2709	3	19	74	'10-9	66.48	5.4	3.0	intergenic	not near genes	chr3L_19_12930001	chr3L_12930001	0.53	RAL-639
266	chr3L	13057876	13057959	Bari1	1707	452	11	83	'2-9	59.60	3.1	2.7	intergenic	not near genes	chr3L_11_13055001	chr3L_13055001	0.18	RAL-639
267	chr3L	13471658	13471682	jockey	4697	4673	5	24	'3-2	59.92	3.2	1.2	intron	CG10089 -	chr3L_5_13470001	chr3L_13470001	0.60	RAL-639
268	chr3L	13546562	13546635	hobo	111	2934	13	73	'5-8	62.52	4.8	2.2	intron	bru-3 -	chr3L_13_13545001	chr3L_13545001	0.38	RAL-639
269	chr3L	13791171	13791240	Tabor	6849	483	14	69	'11-3	60.42	3.1	3.4	intron	bru-3 -	chr3L_14_13790001	chr3L_13790001	0.79	RAL-639
270	chr3L	13900814	13900838	jockey	4678	4704	4	24	'2-2	60.80	5.4	0.6	intron	dysc -	chr3L_4_13900001	chr3L_13900001	0.50	RAL-639
271	chr3L	15174270	15174342	roo	403	8666	12	72	'4-8	67.97	3.0	3.0	intergenic	not near genes	chr3L_12_15170001	chr3L_15170001	0.33	RAL-639
272	chr3L	15725146	15725215	hobo	2	2932	9	69	'6-3	62.78	4.1	1.8	intron	comm -	chr3L_9_15725001	chr3L_15725001	0.67	RAL-639
273	chr3L	15840147	15840210	3S18	5784	342	13	63	'5-8	60.44	3.0	3.2	intron	CG32150 -	chr3L_13_15840001	chr3L_15840001	0.38	RAL-639
274	chr3L	16010373	16010442	FB	1	3	12	69	'5-7	64.20	2.3	3.6	intron	mib1 -	chr3L_12_16010001	chr3L_16010001	0.42	RAL-639
275	chr3L	16137311	16137350	Juan	4031	4201	8	39	'6-2	56.88	3.4	1.8	5` UTR	CG5157 -	chr3L_8_16135001	chr3L_16135001	0.75	RAL-639
276	chr3L	16169367	16169441	Max-element	5	8235	13	74	'5-8	61.75	3.4	3.0	intergenic	CG33796 -	chr3L_13_16165001	chr3L_16165001	0.38	RAL-639
277	chr3L	16196222	16196300	roo	2	409	16	78	'5-11	70.68	2.1	5.2	intergenic	CR45437 -	chr3L_16_16195001	chr3L_16195001	0.31	RAL-639
278	chr3L	16586152	16586212	pogo	3	2081	15	60	'9-6	68.22	3.4	3.4	3` UTR	Syx8 -	chr3L_15_16585001	chr3L_16585001	0.60	RAL-639
279	chr3L	16636245	16636313	roo	403	8671	7	68	'3-4	65.82	2.1	2.3	intron	Abl -	chr3L_7_16635001	chr3L_16635001	0.43	RAL-639
280	chr3L	16698820	16698901	pogo	1	2	15	81	'6-9	70.02	3.3	3.5	intron,intron	Lasp -,CG43954 -	chr3L_15_16695001	chr3L_16695001	0.40	RAL-639
281	chr3L	16744823	16744854	pogo	21	2069	4	31	'3-1	73.20	5.8	0.6	intergenic	not near genes	chr3L_4_16740001	chr3L_16740001	0.75	RAL-639
282	chr3L	16985522	16985584	pogo	1	2081	13	62	'10-3	68.50	3.0	3.2	intron	Exn +	chr3L_13_16985001	chr3L_16985001	0.77	RAL-639
283	chr3L	17492302	17492364	roo	4	394	15	62	'9-6	62.15	2.6	4.2	intron	Oatp74D +	chr3L_15_17490001	chr3L_17490001	0.60	RAL-639
284	chr3L	17707943	17708003	pogo	2085	6	9	60	'4-5	64.61	3.3	2.1	intron	Ccn +	chr3L_9_17705001	chr3L_17705001	0.44	RAL-639
285	chr3L	17905692	17905760	roo	402	8671	19	68	'11-8	65.59	2.0	6.3	intron	Prestin -	chr3L_19_17905001	chr3L_17905001	0.58	RAL-639
286	chr3L	18072164	18072203	copia	4895	240	4	39	'2-2	65.00	4.8	0.7	intergenic	CG44005 -,CG44004 -	chr3L_4_18070001	chr3L_18070001	0.50	RAL-639
287	chr3L	18174144	18174213	pogo	4	2090	8	69	'5-3	65.18	4.1	1.6	intron	W -	chr3L_8_18170001	chr3L_18170001	0.62	RAL-639
288	chr3L	18184471	18184538	copia	4870	243	5	67	'3-2	64.71	2.8	1.3	intron	W -	chr3L_5_18180001	chr3L_18180001	0.60	RAL-639
289	chr3L	18357341	18357362	Juan	24	8	6	21	'3-3	53.18	1.0	3.0	intergenic	not near genes	chr3L_6_18355001	chr3L_18355001	0.50	RAL-639
290	chr3L	18360590	18360664	roo	8665	403	6	74	'2-4	61.78	2.5	1.7	intergenic	not near genes	chr3L_6_18360001	chr3L_18360001	0.33	RAL-639
291	chr3L	18393390	18393459	blood	7021	375	16	69	'9-7	61.66	2.1	5.2	intergenic	not near genes	chr3L_16_18390001	chr3L_18390001	0.56	RAL-639
292	chr3L	18438240	18438292	mdg1	9	402	10	52	'4-6	66.00	1.0	5.0	intergenic	skl -	chr3L_10_18435001	chr3L_18435001	0.40	RAL-639
293	chr3L	18468598	18468617	I-element	5326	5346	6	19	'3-3	60.71	3.2	1.4	intergenic	not near genes	chr3L_6_18465001	chr3L_18465001	0.50	RAL-639
294	chr3L	18526137	18526214	opus	7115	493	10	77	'3-7	63.42	3.4	2.3	intergenic	not near genes	chr3L_10_18525001	chr3L_18525001	0.30	RAL-639
295	chr3L	18792658	18792724	pogo	2089	5	8	66	'3-5	64.38	0.7	4.7	intron	ftz-f1 -	chr3L_8_18790001	chr3L_18790001	0.38	RAL-639
296	chr3L	18879441	18879514	HMS-Beagle	6800	7038	20	73	'9-11	65.91	4.7	3.5	exon	CG3961 -	chr3L_20_18875001	chr3L_18875001	0.45	RAL-639
297	chr3L	18959950	18959981	BS	4993	5024	6	31	'3-3	58.89	4.2	1.2	intergenic	not near genes	chr3L_6_18955001	chr3L_18955001	0.50	RAL-639
298	chr3L	19058085	19058109	F-element	35	11	4	24	'3-1	61.00	3.8	0.8	intergenic	not near genes	chr3L_4_19055001	chr3L_19055001	0.75	RAL-639
299	chr3L	19073734	19073818	opus	7500	110	12	84	'7-5	69.20	3.8	2.5	intron	Mkp3 -	chr3L_12_19070001	chr3L_19070001	0.58	RAL-639
300	chr3L	19339404	19339423	Tc1	24	5	4	19	'1-3	63.10	2.1	1.3	intergenic	not near genes	chr3L_4_19335001	chr3L_19335001	0.25	RAL-639
301	chr3L	19349949	19349995	1360	8	3204	8	46	'5-3	61.10	1.7	3.0	intron	CG32206 -	chr3L_8_19345001	chr3L_19345001	0.62	RAL-639
302	chr3L	19607171	19607243	1360	5	3388	20	72	'6-14	61.90	5.4	3.1	exon	CG9372 +	chr3L_20_19605001	chr3L_19605001	0.30	RAL-639
303	chr3L	19943945	19944009	copia	241	2	9	64	'4-5	65.80	2.8	2.4	intron	Ac76E +	chr3L_9_19940001	chr3L_19940001	0.44	RAL-639
304	chr3L	20038530	20038550	G2	2631	2650	4	20	'2-2	62.51	4.9	0.7	intergenic	not near genes	chr3L_4_20035001	chr3L_20035001	0.50	RAL-639
305	chr3L	20039845	20039865	Doc	22	2	7	20	'3-4	55.83	5.9	1.0	intergenic	not near genes	chr3L_7_20035001	chr3L_20035001	0.43	RAL-639
306	chr3L	20090346	20090414	roo	399	8665	12	68	'7-5	61.40	4.0	2.4	intergenic	not near genes	chr3L_12_20090001	chr3L_20090001	0.58	RAL-639
307	chr3L	20269287	20269358	hobo	3	2935	15	71	'11-4	57.61	2.4	4.4	3` UTR	gogo -	chr3L_15_20265001	chr3L_20265001	0.73	RAL-639
308	chr3L	20711623	20711696	jockey	4990	4552	16	73	'10-6	63.01	3.3	3.7	intergenic	not near genes	chr3L_16_20710001	chr3L_20710001	0.62	RAL-639
309	chr3L	20946628	20946689	copia	248	11	7	61	'1-6	57.06	6.4	0.9	intron	fng -	chr3L_7_20945001	chr3L_20945001	0.14	RAL-639
310	chr3L	21093192	21093213	Ivk	28	11	5	21	'3-2	66.14	3.4	1.1	intron	ko -	chr3L_5_21090001	chr3L_21090001	0.60	RAL-639
311	chr3L	21996933	21997012	mdg3	5250	243	14	79	'4-10	64.65	3.8	2.9	intergenic	not near genes	chr3L_14_21995001	chr3L_21995001	0.29	RAL-639
312	chr3L	22635688	22635762	hopper	1410	2	11	74	'4-7	63.01	2.8	2.9	intron	CG14459 -	chr3L_11_22635001	chr3L_22635001	0.36	RAL-639
313	chr3L	22921368	22921442	roo	407	8669	19	74	'9-10	60.60	4.8	3.3	intron	CG12768 +	chr3L_19_22920001	chr3L_22920001	0.47	RAL-639
314	chr3L	22982230	22982254	jockey	36	10	6	24	'2-4	62.44	3.8	1.2	intergenic	not near genes	chr3L_6_22980001	chr3L_22980001	0.33	RAL-639
315	chr3L	23083372	23083397	1360	175	183	7	25	'4-3	57.35	3.8	1.5	intergenic	not near genes	chr3L_7_23080001	chr3L_23080001	0.57	RAL-639
316	chr3L	23210710	23210776	copia	4869	242	8	66	'4-4	64.62	3.0	2.0	intron	nAChRalpha4 +	chr3L_8_23210001	chr3L_23210001	0.50	RAL-639
317	chr3L	24766141	24766218	1360	3388	3388	14	77	'6-8	66.09	3.1	3.4	intron	scro +	chr3L_14_24765001	chr3L_24765001	0.43	RAL-639
318	chr3L	25272540	25272576	1360	3	22	6	36	'4-2	71.98	3.3	1.4	intron	CG40467 -	chr3L_6_25270001	chr3L_25270001	0.67	RAL-639
319	chr3L	25332883	25332964	blood	379	2	13	81	'7-6	62.12	2.7	3.5	intergenic	not near genes	chr3L_13_25330001	chr3L_25330001	0.54	RAL-639
320	chr3L	27415229	27415280	transib2	2819	25	10	51	'5-5	65.96	3.9	2.0	intron	Dbp80 +	chr3L_10_27415001	chr3L_27415001	0.50	RAL-639
321	chr3R	2393051	2393068	diver2	4795	278	5	17	'3-2	61.71	0.0	5.0	intergenic	not near genes	chr3R_5_2390001	chr3R_2390001	0.60	RAL-639
322	chr3R	2640885	2640930	copia	234	4881	4	45	'1-3	59.39	1.3	1.7	intron	CG41056 -	chr3R_4_2640001	chr3R_2640001	0.25	RAL-639
323	chr3R	2651226	2651262	flea	4789	4754	6	36	'2-4	70.46	2.3	1.8	intron	CG41056 -	chr3R_6_2650001	chr3R_2650001	0.33	RAL-639
324	chr3R	3697562	3697645	opus	7114	497	19	83	'10-9	72.41	3.5	4.2	intergenic	not near genes	chr3R_19_3695001	chr3R_3695001	0.53	RAL-639
325	chr3R	3753073	3753100	ZAM	457	8392	6	27	'3-3	63.82	7.2	0.7	intergenic	not near genes	chr3R_6_3750001	chr3R_3750001	0.50	RAL-639
326	chr3R	4497843	4497872	297	6581	29	4	29	'2-2	67.67	5.8	0.6	intron	CG34357 -	chr3R_4_4495001	chr3R_4495001	0.50	RAL-639
327	chr3R	4568370	4568426	copia	240	4878	5	56	'1-4	56.27	3.0	1.2	intergenic	not near genes	chr3R_5_4565001	chr3R_4565001	0.20	RAL-639
328	chr3R	4667298	4667360	FB	7	8	9	62	'4-5	57.92	4.6	1.6	intron	CG43427 +	chr3R_9_4665001	chr3R_4665001	0.44	RAL-639
329	chr3R	4885334	4885397	1360	3386	3377	15	63	'12-3	71.34	4.0	3.0	intergenic	not near genes	chr3R_15_4885001	chr3R_4885001	0.80	RAL-639
330	chr3R	4913578	4913633	1360	180	4	13	55	'4-9	57.63	3.5	2.9	intron	Cdep +	chr3R_13_4910001	chr3R_4910001	0.31	RAL-639
331	chr3R	5152792	5152873	opus	111	7498	15	81	'11-4	67.27	4.0	3.0	intron	dpr16 +	chr3R_15_5150001	chr3R_5150001	0.73	RAL-639
332	chr3R	5192431	5192507	copia	4867	253	17	76	'12-5	64.31	1.8	6.1	intron	cno -	chr3R_17_5190001	chr3R_5190001	0.71	RAL-639
333	chr3R	5701741	5701768	opus	472	499	13	27	'4-9	67.15	4.5	2.4	intron	plx +	chr3R_13_5700001	chr3R_5700001	0.31	RAL-639
334	chr3R	5840977	5841056	297	393	6583	8	79	'2-6	66.99	3.4	1.8	intergenic	CG1213 +	chr3R_8_5840001	chr3R_5840001	0.25	RAL-639
335	chr3R	5896754	5896816	Quasimodo	7366	18	4	62	'2-2	73.57	3.4	0.9	intron	CG34113 -	chr3R_4_5895001	chr3R_5895001	0.50	RAL-639
336	chr3R	5913559	5913624	roo	408	8679	7	65	'5-2	69.33	1.4	2.9	intron	CG34113 -	chr3R_7_5910001	chr3R_5910001	0.71	RAL-639
337	chr3R	5920977	5921049	Tabor	480	4	21	72	'9-12	61.00	3.3	4.9	intron	CG34113 -	chr3R_21_5920001	chr3R_5920001	0.43	RAL-639
338	chr3R	6058165	6058222	roo	9064	10	9	57	'5-4	67.08	3.0	2.2	intergenic	not near genes	chr3R_9_6055001	chr3R_6055001	0.56	RAL-639
339	chr3R	6068902	6068966	mdg1	7045	411	10	64	'2-8	64.84	3.3	2.3	intergenic	not near genes	chr3R_10_6065001	chr3R_6065001	0.20	RAL-639
340	chr3R	6420050	6420127	pogo	2099	2	4	77	'1-3	67.79	4.5	0.7	intron	gpp +	chr3R_4_6420001	chr3R_6420001	0.25	RAL-639
341	chr3R	6586813	6586868	mdg1	7055	412	7	55	'2-5	59.72	3.3	1.6	intron	dpr11 -	chr3R_7_6585001	chr3R_6585001	0.29	RAL-639
342	chr3R	6966357	6966426	1360	1	5	13	69	'6-7	68.31	1.3	5.7	intron	Antp -	chr3R_13_6965001	chr3R_6965001	0.46	RAL-639
343	chr3R	7028627	7028675	hobo	22	2931	12	48	'8-4	66.83	3.0	3.0	intergenic	not near genes	chr3R_12_7025001	chr3R_7025001	0.67	RAL-639
344	chr3R	7167023	7167091	Tabor	7321	8	8	68	'4-4	61.63	2.6	2.2	intron	sas +	chr3R_8_7165001	chr3R_7165001	0.50	RAL-639
345	chr3R	7374235	7374262	F-element	10	10	4	27	'1-3	63.28	2.7	1.1	intergenic	not near genes	chr3R_4_7370001	chr3R_7370001	0.25	RAL-639
346	chr3R	7491765	7491798	invader6	373	4833	7	33	'3-4	67.85	3.8	1.5	intron	alpha-Est10 -	chr3R_7_7490001	chr3R_7490001	0.43	RAL-639
347	chr3R	7492317	7492337	invader6	459	439	6	20	'4-2	62.25	1.7	2.2	intron	alpha-Est10 -	chr3R_6_7490001	chr3R_7490001	0.67	RAL-639
348	chr3R	7492408	7492478	1360	6	3387	18	70	'9-9	65.19	4.7	3.2	intron	alpha-Est10 -	chr3R_18_7490001	chr3R_7490001	0.50	RAL-639
349	chr3R	7770732	7770776	copia	20	241	8	44	'4-4	69.02	1.3	3.5	intergenic	CG11286 -	chr3R_8_7770001	chr3R_7770001	0.50	RAL-639
350	chr3R	8229828	8229902	412	495	9	13	74	'9-4	63.49	3.1	3.2	3` UTR	CR45551 -	chr3R_13_8225001	chr3R_8225001	0.69	RAL-639
351	chr3R	8431276	8431338	jockey	4984	4668	10	62	'5-5	60.12	6.5	1.3	intron	CG45263 -	chr3R_10_8430001	chr3R_8430001	0.50	RAL-639
352	chr3R	8452700	8452761	Max-element	8235	281	13	61	'4-9	62.45	5.4	2.0	intron	CG45263 -	chr3R_13_8450001	chr3R_8450001	0.31	RAL-639
353	chr3R	8613369	8613452	opus	498	7115	13	83	'8-5	66.06	4.5	2.4	intron	5-HT2B +	chr3R_13_8610001	chr3R_8610001	0.62	RAL-639
354	chr3R	9106188	9106249	1360	3386	3380	21	61	'9-12	64.68	4.6	3.8	intron	pum -	chr3R_21_9105001	chr3R_9105001	0.43	RAL-639
355	chr3R	9192512	9192589	invader3	2	276	8	77	'2-6	63.22	3.6	1.7	intron	pum -	chr3R_8_9190001	chr3R_9190001	0.25	RAL-639
356	chr3R	9293600	9293633	opus	498	7468	6	33	'3-3	69.33	2.7	1.6	intergenic	CG8861 -	chr3R_6_9290001	chr3R_9290001	0.50	RAL-639
357	chr3R	9349246	9349261	F-element	30	15	6	15	'3-3	51.09	3.9	1.2	intron	CG45050 +	chr3R_6_9345001	chr3R_9345001	0.50	RAL-639
358	chr3R	9485474	9485554	412	3	495	14	80	'7-7	64.99	2.9	3.6	intron	CG16779 -	chr3R_14_9485001	chr3R_9485001	0.50	RAL-639
359	chr3R	9502564	9502635	P-element	2882	2	9	71	'6-3	50.88	5.1	1.5	5` UTR	RhoL -	chr3R_9_9500001	chr3R_9500001	0.67	RAL-639
360	chr3R	10030751	10030782	BS	5032	5003	9	31	'7-2	61.07	3.9	1.8	intron	Mical -	chr3R_9_10030001	chr3R_10030001	0.78	RAL-639
361	chr3R	10099882	10100110	pogo	22	2	6	228	'5-1	63.87	3.2	1.4	5` UTR	CR43459 +	chr3R_6_10095001	chr3R_10095001	0.83	RAL-639
362	chr3R	10264261	10264301	P-element	23	2872	13	40	'5-8	38.96	6.4	1.8	intergenic	CG43143 +,pont +	chr3R_13_10260001	chr3R_10260001	0.38	RAL-639
363	chr3R	10370757	10370806	412	14	475	15	49	'8-7	63.40	5.2	2.4	intron	Rfx -	chr3R_15_10370001	chr3R_10370001	0.53	RAL-639
364	chr3R	10545828	10545906	roo	1	409	21	78	'11-10	66.22	1.8	7.5	intron	hth -	chr3R_21_10545001	chr3R_10545001	0.52	RAL-639
365	chr3R	10748404	10748481	297	6581	6970	6	77	'4-2	67.72	2.9	1.5	intron	TkR86C -	chr3R_6_10745001	chr3R_10745001	0.67	RAL-639
366	chr3R	10955854	10955922	412	483	3	13	68	'4-9	59.46	2.6	3.6	intergenic	not near genes	chr3R_13_10955001	chr3R_10955001	0.31	RAL-639
367	chr3R	11009463	11009534	roo	403	8668	11	71	'3-8	65.99	1.1	5.2	intron	CG34114 +	chr3R_11_11005001	chr3R_11005001	0.27	RAL-639
368	chr3R	11034281	11034304	Doc	4	26	4	23	'2-2	58.20	3.3	0.9	intron	CG34114 +	chr3R_4_11030001	chr3R_11030001	0.50	RAL-639
369	chr3R	11123118	11123192	roo	9066	8664	13	74	'6-7	61.87	2.9	3.3	intergenic	not near genes	chr3R_13_11120001	chr3R_11120001	0.46	RAL-639
370	chr3R	11131414	11131491	blood	7011	373	11	77	'7-4	64.75	1.6	4.2	intergenic	not near genes	chr3R_11_11130001	chr3R_11130001	0.64	RAL-639
371	chr3R	11142209	11142277	Max-element	8245	8534	12	68	'5-7	60.53	4.0	2.4	intergenic	not near genes	chr3R_12_11140001	chr3R_11140001	0.42	RAL-639
372	chr3R	11181609	11181688	roo	9069	8662	16	79	'8-8	64.25	2.4	4.7	intergenic	not near genes	chr3R_16_11180001	chr3R_11180001	0.50	RAL-639
373	chr3R	11517442	11517507	pogo	2096	7	4	65	'1-3	63.36	7.2	0.5	intergenic	not near genes	chr3R_4_11515001	chr3R_11515001	0.25	RAL-639
374	chr3R	11526781	11526835	pogo	2096	9	5	54	'2-3	64.47	2.5	1.4	intergenic	not near genes	chr3R_5_11525001	chr3R_11525001	0.40	RAL-639
375	chr3R	11553657	11553731	hopper	1413	1412	8	74	'5-3	64.89	4.9	1.4	intergenic	CG14708 +	chr3R_8_11550001	chr3R_11550001	0.62	RAL-639
376	chr3R	11609063	11609124	pogo	12	2092	7	61	'2-5	66.74	4.5	1.3	intron	Jupiter -	chr3R_7_11605001	chr3R_11605001	0.29	RAL-639
377	chr3R	12273001	12273084	roo	411	8664	15	83	'6-9	67.37	0.8	8.3	intron	svp +	chr3R_15_12270001	chr3R_12270001	0.40	RAL-639
378	chr3R	12411838	12411925	Transpac	4913	311	13	87	'4-9	64.57	3.7	2.8	3` UTR	Dip-C -	chr3R_13_12410001	chr3R_12410001	0.31	RAL-639
379	chr3R	12600953	12601003	roo	8668	9045	10	50	'8-2	61.89	3.1	2.4	intergenic	not near genes	chr3R_10_12600001	chr3R_12600001	0.80	RAL-639
380	chr3R	12837723	12837802	roo	404	8661	18	79	'9-9	69.40	3.5	4.0	intergenic	not near genes	chr3R_18_12835001	chr3R_12835001	0.50	RAL-639
381	chr3R	12852552	12852573	copia	251	230	4	21	'2-2	63.00	0.7	2.4	intergenic	not near genes	chr3R_4_12850001	chr3R_12850001	0.50	RAL-639
382	chr3R	12967092	12967161	Transpac	5221	5	13	69	'4-9	63.58	4.1	2.5	intron,intron	grsm -,CG14384 -	chr3R_13_12965001	chr3R_12965001	0.31	RAL-639
383	chr3R	13154004	13154067	hobo	6	2930	9	63	'6-3	64.84	3.0	2.2	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_9_13150001	chr3R_13150001	0.67	RAL-639
384	chr3R	13225495	13225567	hobo	3	2936	15	72	'9-6	61.29	2.7	4.1	intron	Ace -	chr3R_15_13225001	chr3R_13225001	0.60	RAL-639
385	chr3R	13553295	13553315	Doc	22	2	4	20	'2-2	64.00	3.1	1.0	intergenic	not near genes	chr3R_4_13550001	chr3R_13550001	0.50	RAL-639
386	chr3R	13572538	13572606	copia	3	246	10	68	'7-3	64.95	5.9	1.4	intergenic	not near genes	chr3R_10_13570001	chr3R_13570001	0.70	RAL-639
387	chr3R	13987061	13987118	1360	20	3388	12	57	'6-6	71.23	2.4	3.5	intron	rdx -	chr3R_12_13985001	chr3R_13985001	0.50	RAL-639
388	chr3R	14722237	14722296	pogo	2093	10	6	59	'2-4	64.77	10.1	0.5	intron	kibra -	chr3R_6_14720001	chr3R_14720001	0.33	RAL-639
389	chr3R	14723815	14723855	P-element	9	5	4	40	'2-2	42.32	4.3	0.8	5` UTR	kibra -	chr3R_4_14720001	chr3R_14720001	0.50	RAL-639
390	chr3R	15122863	15122937	pogo	6	2100	18	74	'5-13	70.01	3.9	3.7	intron	CG42788 -	chr3R_18_15120001	chr3R_15120001	0.28	RAL-639
391	chr3R	15157594	15157659	invader3	2	5449	11	65	'9-2	64.74	2.9	2.8	intron	Gyc88E +	chr3R_11_15155001	chr3R_15155001	0.82	RAL-639
392	chr3R	15524407	15524477	pogo	8	2098	8	70	'3-5	62.10	2.1	2.6	intergenic	not near genes	chr3R_8_15520001	chr3R_15520001	0.38	RAL-639
393	chr3R	15537968	15538049	blood	379	7012	24	81	'9-15	65.41	5.0	4.0	exon	CG18519 -	chr3R_24_15535001	chr3R_15535001	0.38	RAL-639
394	chr3R	15680121	15680137	jockey	487	490	6	16	'1-5	60.83	5.0	1.0	intron	pxb +	chr3R_6_15680001	chr3R_15680001	0.17	RAL-639
395	chr3R	16374204	16374301	roo	404	406	4	97	'3-1	47.67	2.1	1.3	intergenic	ss -	chr3R_4_16370001	chr3R_16370001	0.75	RAL-639
396	chr3R	16610363	16610442	copia	255	4869	4	79	'1-3	66.80	1.6	1.5	intron	NPF +	chr3R_4_16610001	chr3R_16610001	0.25	RAL-639
397	chr3R	16643117	16643182	gypsy	7	454	8	65	'3-5	61.16	3.6	1.7	intergenic	nonA-l +,CG10326 +	chr3R_8_16640001	chr3R_16640001	0.38	RAL-639
398	chr3R	16662074	16662097	pogo	2075	2100	4	23	'2-2	65.89	9.8	0.4	intron	Ubx -	chr3R_4_16660001	chr3R_16660001	0.50	RAL-639
399	chr3R	16781263	16781318	mdg1	7046	403	7	55	'2-5	65.02	2.5	2.0	intergenic	not near genes	chr3R_7_16780001	chr3R_16780001	0.29	RAL-639
400	chr3R	17265805	17265862	412	7544	22	8	57	'5-3	60.54	2.2	2.5	3` UTR	CG44257 +	chr3R_8_17265001	chr3R_17265001	0.62	RAL-639
401	chr3R	17275054	17275122	roo	8666	398	13	68	'6-7	66.10	5.3	2.1	intergenic	not near genes	chr3R_13_17275001	chr3R_17275001	0.46	RAL-639
402	chr3R	17383421	17383453	copia	4901	4869	4	32	'1-3	74.68	9.8	0.4	intron,intron	Brf -,lute +	chr3R_4_17380001	chr3R_17380001	0.25	RAL-639
403	chr3R	17389120	17389196	297	1	6970	4	76	'3-1	65.77	4.5	0.7	intron,3` UTR	Brf -,lute +	chr3R_4_17385001	chr3R_17385001	0.75	RAL-639
404	chr3R	17569995	17570024	pogo	2073	27	4	29	'2-2	78.00	3.5	0.9	intergenic	not near genes	chr3R_4_17565001	chr3R_17565001	0.50	RAL-639
405	chr3R	18113134	18113203	hopper	1406	1412	10	69	'1-9	63.02	2.3	3.0	intron	sr +	chr3R_10_18110001	chr3R_18110001	0.10	RAL-639
406	chr3R	18288921	18288988	1360	3378	1	16	67	'8-8	67.65	4.5	2.9	3` UTR	l(3)05822 -	chr3R_16_18285001	chr3R_18285001	0.50	RAL-639
407	chr3R	18443092	18443165	copia	251	3	6	73	'2-4	60.26	2.8	1.6	intron	fru -	chr3R_6_18440001	chr3R_18440001	0.33	RAL-639
408	chr3R	18523632	18523711	flea	4754	5009	17	79	'10-7	67.51	4.0	3.4	intron	fru -	chr3R_17_18520001	chr3R_18520001	0.59	RAL-639
409	chr3R	18585632	18585743	P-element	2857	2718	6	111	'5-1	51.57	3.9	1.2	intron,intron	CG7694 +,fray +	chr3R_6_18585001	chr3R_18585001	0.83	RAL-639
410	chr3R	18618991	18619071	roo	406	8663	21	80	'9-12	66.35	2.2	6.6	intron,intron	qin +,CG14304 -	chr3R_21_18615001	chr3R_18615001	0.43	RAL-639
411	chr3R	19210483	19210500	F-element	11	28	4	17	'1-3	56.00	5.2	0.6	intergenic	not near genes	chr3R_4_19210001	chr3R_19210001	0.25	RAL-639
412	chr3R	19226937	19227014	gypsy	459	6986	17	77	'2-15	67.43	3.9	3.5	3` UTR	CG11703 -	chr3R_17_19225001	chr3R_19225001	0.12	RAL-639
413	chr3R	19528890	19528964	hobo	2709	4	14	74	'9-5	62.74	3.9	2.9	intron	Dys +	chr3R_14_19525001	chr3R_19525001	0.64	RAL-639
414	chr3R	19545464	19545491	jockey	380	408	5	27	'2-3	63.38	5.1	0.8	intron	Dys +	chr3R_5_19545001	chr3R_19545001	0.40	RAL-639
415	chr3R	19684586	19684652	Tirant	394	8107	13	66	'7-6	66.02	3.0	3.2	intron	Naam +	chr3R_13_19680001	chr3R_19680001	0.54	RAL-639
416	chr3R	20051889	20051971	Max-element	344	8238	14	82	'8-6	64.38	4.9	2.4	intron	CG17193 -	chr3R_14_20050001	chr3R_20050001	0.57	RAL-639
417	chr3R	20703185	20703269	flea	255	4754	9	84	'1-8	72.57	2.0	3.0	intron	Oamb -	chr3R_9_20700001	chr3R_20700001	0.11	RAL-639
418	chr3R	21497431	21497504	roo	8670	408	11	73	'4-7	67.25	3.6	2.4	intergenic	not near genes	chr3R_11_21495001	chr3R_21495001	0.36	RAL-639
419	chr3R	21716880	21716919	pogo	13	2074	5	39	'4-1	69.07	3.9	1.0	intron	CG31176 -	chr3R_5_21715001	chr3R_21715001	0.80	RAL-639
420	chr3R	21887613	21887664	P-element	24	2885	13	51	'4-9	47.60	2.6	3.6	intron	CG6678 +	chr3R_13_21885001	chr3R_21885001	0.31	RAL-639
421	chr3R	22087726	22087742	Tc3	313	313	4	16	'2-2	63.21	2.7	1.1	intron,3` UTR	CG5778 -,CG5791 +	chr3R_4_22085001	chr3R_22085001	0.50	RAL-639
422	chr3R	22188030	22188091	copia	247	4879	4	61	'1-3	59.07	5.0	0.7	intron	SKIP +	chr3R_4_22185001	chr3R_22185001	0.25	RAL-639
423	chr3R	22210959	22211032	copia	248	4869	6	73	'2-4	65.05	2.2	1.9	intron	SKIP +	chr3R_6_22210001	chr3R_22210001	0.33	RAL-639
424	chr3R	22594673	22594688	accord	7034	189	4	15	'3-1	60.68	6.7	0.5	intron	Efa6 +	chr3R_4_22590001	chr3R_22590001	0.75	RAL-639
425	chr3R	22668243	22668299	Transpac	309	22	12	56	'9-3	61.65	3.4	2.7	intron	wake +	chr3R_12_22665001	chr3R_22665001	0.75	RAL-639
426	chr3R	22808839	22808900	I-element	2	5350	5	61	'3-2	64.43	2.9	1.3	intergenic	not near genes	chr3R_5_22805001	chr3R_22805001	0.60	RAL-639
427	chr3R	22971693	22971749	copia	4880	243	10	56	'9-1	58.74	2.1	3.2	intergenic	not near genes	chr3R_10_22970001	chr3R_22970001	0.90	RAL-639
428	chr3R	23906139	23906216	3S18	335	5762	21	77	'5-16	66.68	2.7	5.7	intron	sba -	chr3R_21_23905001	chr3R_23905001	0.24	RAL-639
429	chr3R	24102211	24102277	pogo	2097	13	9	66	'4-5	68.15	3.0	2.2	intron,intron	4EHP -,Syx1A -	chr3R_9_24100001	chr3R_24100001	0.44	RAL-639
430	chr3R	24700932	24700959	roo	30	4	5	27	'3-2	68.50	3.3	1.2	intron	slo +	chr3R_5_24700001	chr3R_24700001	0.60	RAL-639
431	chr3R	24837030	24837087	copia	236	4872	4	57	'1-3	62.15	5.8	0.6	intron	sosie +	chr3R_4_24835001	chr3R_24835001	0.25	RAL-639
432	chr3R	25058180	25058250	roo	398	8661	7	70	'1-6	61.05	1.9	2.4	intron	Unc-13-4B +	chr3R_7_25055001	chr3R_25055001	0.14	RAL-639
433	chr3R	25284103	25284181	412	6	496	9	78	'4-5	63.59	4.3	1.7	exon	CG31300 +	chr3R_9_25280001	chr3R_25280001	0.44	RAL-639
434	chr3R	25405374	25405393	opus	499	480	6	19	'4-2	69.71	10.4	0.5	intron	Fur1 -	chr3R_6_25405001	chr3R_25405001	0.67	RAL-639
435	chr3R	25556977	25557047	pogo	4	2092	6	70	'3-3	68.90	5.0	1.0	intron	msi +	chr3R_6_25555001	chr3R_25555001	0.50	RAL-639
436	chr3R	25765550	25765584	Rt1b	343	373	11	34	'5-6	65.12	8.4	1.2	intergenic	not near genes	chr3R_11_25765001	chr3R_25765001	0.45	RAL-639
437	chr3R	26018789	26018822	hobo	2911	2708	8	33	'6-2	60.70	6.2	1.1	3` UTR	CR43643 -	chr3R_8_26015001	chr3R_26015001	0.75	RAL-639
438	chr3R	26084541	26084566	pogo	31	8	7	25	'4-3	68.13	6.9	0.9	intron	dys -	chr3R_7_26080001	chr3R_26080001	0.57	RAL-639
439	chr3R	26178514	26178586	hobo	7	2709	19	72	'10-9	62.85	3.0	4.8	intron	CG31323 +	chr3R_19_26175001	chr3R_26175001	0.53	RAL-639
440	chr3R	26180904	26180979	jockey	4987	4662	10	75	'5-5	65.24	2.4	2.9	intron	CG31323 +	chr3R_10_26180001	chr3R_26180001	0.50	RAL-639
441	chr3R	26253933	26253971	jockey	4984	4694	5	38	'3-2	55.75	2.7	1.4	intergenic	Ald -	chr3R_5_26250001	chr3R_26250001	0.60	RAL-639
442	chr3R	26472409	26472426	hobo	2	19	5	17	'2-3	60.42	7.1	0.6	3` UTR	plum -	chr3R_5_26470001	chr3R_26470001	0.40	RAL-639
443	chr3R	26544235	26544308	FB	3	1	6	73	'2-4	64.47	1.9	2.1	intron	scrib +	chr3R_6_26540001	chr3R_26540001	0.33	RAL-639
444	chr3R	26578131	26578211	pogo	2	2099	6	80	'4-2	66.55	6.4	0.8	intron	scrib +	chr3R_6_26575001	chr3R_26575001	0.67	RAL-639
445	chr3R	26741340	26741412	mdg3	5262	247	15	72	'6-9	64.06	5.2	2.4	intergenic	not near genes	chr3R_15_26740001	chr3R_26740001	0.40	RAL-639
446	chr3R	26818869	26818951	opus	7500	110	17	82	'8-9	67.97	4.9	2.9	intron	Tl +	chr3R_17_26815001	chr3R_26815001	0.47	RAL-639
447	chr3R	27751939	27751967	jockey	35	9	12	28	'5-7	59.48	3.2	2.9	intergenic	not near genes	chr3R_12_27750001	chr3R_27750001	0.42	RAL-639
448	chr3R	27800707	27800811	copia	245	4876	4	104	'1-3	60.50	2.1	1.3	intron	CG34353 -	chr3R_4_27800001	chr3R_27800001	0.25	RAL-639
449	chr3R	27999907	27999978	hopper	4	1409	14	71	'10-4	61.55	3.7	3.0	intergenic	not near genes	chr3R_14_27995001	chr3R_27995001	0.71	RAL-639
450	chr3R	28282400	28282480	pogo	2099	2099	10	80	'7-3	66.02	5.1	1.6	intergenic	CG34436 +	chr3R_10_28280001	chr3R_28280001	0.70	RAL-639
451	chr3R	28287702	28287732	jockey	35	4	13	30	'7-6	60.12	5.4	2.0	intergenic	not near genes	chr3R_13_28285001	chr3R_28285001	0.54	RAL-639
452	chr3R	28305644	28305724	blood	377	7012	14	80	'6-8	66.15	3.5	3.1	intergenic	not near genes	chr3R_14_28305001	chr3R_28305001	0.43	RAL-639
453	chr3R	28550986	28551060	412	1	7540	17	74	'8-9	62.84	5.1	2.8	intergenic	not near genes	chr3R_17_28550001	chr3R_28550001	0.47	RAL-639
454	chr3R	28661849	28661921	3S18	333	5764	9	72	'1-8	63.28	5.1	1.5	intergenic	not near genes	chr3R_9_28660001	chr3R_28660001	0.11	RAL-639
455	chr3R	29073083	29073317	FB	1	15	13	234	'12-1	67.32	2.9	3.3	intron	CG11873 +	chr3R_13_29070001	chr3R_29070001	0.92	RAL-639
456	chr3R	29081408	29081473	roo	8672	403	6	65	'2-4	70.89	1.5	2.4	intron	CG11873 +	chr3R_6_29080001	chr3R_29080001	0.33	RAL-639
457	chr3R	29364524	29364594	copia	1	246	9	70	'6-3	64.88	2.3	2.7	intergenic	not near genes	chr3R_9_29360001	chr3R_29360001	0.67	RAL-639
458	chr3R	29428008	29428087	412	495	3	7	79	'3-4	66.41	3.7	1.5	intron	Ptp99A +	chr3R_7_29425001	chr3R_29425001	0.43	RAL-639
459	chr3R	29430735	29430755	jockey	4787	4769	7	20	'5-2	59.61	5.2	1.1	intron	Ptp99A +	chr3R_7_29430001	chr3R_29430001	0.71	RAL-639
460	chr3R	29571455	29571525	Transpac	303	4924	7	70	'3-4	58.29	1.9	2.4	intergenic	not near genes	chr3R_7_29570001	chr3R_29570001	0.43	RAL-639
461	chr3R	30302039	30302057	roo	9041	395	8	18	'5-3	64.26	1.8	2.9	intron	hdc +	chr3R_8_30300001	chr3R_30300001	0.62	RAL-639
462	chr3R	30811873	30811940	FB	6	4	8	67	'3-5	66.21	3.5	1.8	intron	cindr +	chr3R_8_30810001	chr3R_30810001	0.38	RAL-639
463	chr3R	30950406	30950458	copia	254	4871	9	52	'1-8	61.29	6.0	1.3	intergenic	not near genes	chr3R_9_30950001	chr3R_30950001	0.11	RAL-639
464	chr3R	31256977	31257055	transib2	2822	1	4	78	'2-2	72.00	3.6	0.9	intergenic	spn-F +	chr3R_4_31255001	chr3R_31255001	0.50	RAL-639
465	chr3R	31395019	31395082	Max-element	291	8237	4	63	'1-3	54.40	6.5	0.5	intron	CG31002 -	chr3R_4_31395001	chr3R_31395001	0.25	RAL-639
466	chr3R	31507091	31507166	copia	4868	251	4	75	'3-1	70.81	4.9	0.7	intergenic	mey +	chr3R_4_31505001	chr3R_31505001	0.75	RAL-639
467	chr3R	32068627	32068657	I-element	32	2	10	30	'4-6	63.82	2.8	2.6	intergenic	Map205 -	chr3R_10_32065001	chr3R_32065001	0.40	RAL-639
468	chr4	311210	311230	1360	7	3364	6	20	'4-2	61.16	4.5	1.1	3` UTR	Zip102B -	chr4_6_310001	chr4_310001	0.67	RAL-639
469	chr4	311559	311590	1360	32	3388	10	31	'4-6	64.89	1.9	3.4	3` UTR	Zip102B -	chr4_10_310001	chr4_310001	0.40	RAL-639
470	chr4	565869	565920	pogo	13	2081	7	51	'5-2	73.58	1.4	2.9	3` UTR	Pur-alpha +	chr4_7_565001	chr4_565001	0.71	RAL-639
471	chrX	535984	536053	mdg3	5256	5490	10	69	'7-3	63.79	4.4	1.9	intron	Appl +	chrX_10_535001	chrX_535001	0.70	RAL-639
472	chrX	559395	559475	roo	409	1	11	80	'4-7	66.54	3.6	2.4	intron	Appl +	chrX_11_555001	chrX_555001	0.36	RAL-639
473	chrX	685341	685368	BS	5072	5015	5	27	'2-3	65.03	3.0	1.2	intergenic	not near genes	chrX_5_685001	chrX_685001	0.40	RAL-639
474	chrX	850186	850214	jockey	22	4988	4	28	'2-2	58.63	5.0	0.7	intron	CG43867 -	chrX_4_850001	chrX_850001	0.50	RAL-639
475	chrX	957658	957727	roo	1	398	8	69	'3-5	58.94	3.7	1.7	intergenic	not near genes	chrX_8_955001	chrX_955001	0.38	RAL-639
476	chrX	1125237	1125293	FB	9	11	11	56	'4-7	65.65	3.4	2.5	intron	CG3655 -	chrX_11_1125001	chrX_1125001	0.36	RAL-639
477	chrX	1177597	1177623	copia	30	4873	5	26	'2-3	64.00	4.0	1.0	intergenic	not near genes	chrX_5_1175001	chrX_1175001	0.40	RAL-639
478	chrX	1248774	1248844	1360	3388	2	20	70	'11-9	67.18	4.7	3.5	intron	Atf3 -	chrX_20_1245001	chrX_1245001	0.55	RAL-639
479	chrX	1268172	1268254	Burdock	6135	254	12	82	'4-8	68.00	2.9	3.1	intron	Atf3 -	chrX_12_1265001	chrX_1265001	0.33	RAL-639
480	chrX	1296341	1296396	412	27	495	11	55	'3-8	61.53	5.2	1.8	intron	DAAM -	chrX_11_1295001	chrX_1295001	0.27	RAL-639
481	chrX	1418423	1418474	pogo	3	2077	9	51	'6-3	70.45	2.4	2.6	intron	futsch +	chrX_9_1415001	chrX_1415001	0.67	RAL-639
482	chrX	2170618	2170689	pogo	2097	3	10	71	'4-6	66.52	4.1	2.0	intron	CG3630 +	chrX_10_2170001	chrX_2170001	0.40	RAL-639
483	chrX	2220578	2220644	copia	254	13	5	66	'1-4	61.28	5.1	0.8	intron	Vinc -	chrX_5_2220001	chrX_2220001	0.20	RAL-639
484	chrX	2296821	2296836	S-element	1710	1695	4	15	'3-1	63.67	4.7	0.7	intron	phl +	chrX_4_2295001	chrX_2295001	0.75	RAL-639
485	chrX	2360873	2360950	copia	4868	251	6	77	'2-4	69.69	1.8	2.1	intron	ptr -	chrX_6_2360001	chrX_2360001	0.33	RAL-639
486	chrX	2746742	2746770	jockey	7	35	6	28	'2-4	69.86	4.7	1.1	intron	kirre +	chrX_6_2745001	chrX_2745001	0.33	RAL-639
487	chrX	2781233	2781289	FB	14	6	7	56	'4-3	65.73	2.3	2.1	intron	kirre +	chrX_7_2780001	chrX_2780001	0.57	RAL-639
488	chrX	3232685	3232742	297	9	381	4	57	'1-3	67.93	0.4	2.9	intron	dnc +	chrX_4_3230001	chrX_3230001	0.25	RAL-639
489	chrX	3554982	3555059	Burdock	6137	6387	6	77	'4-2	64.36	2.7	1.6	intron	CG32791 -	chrX_6_3550001	chrX_3550001	0.67	RAL-639
490	chrX	3928461	3928531	hobo	2	2933	14	70	'9-5	59.30	3.1	3.4	intron	CG42541 -	chrX_14_3925001	chrX_3925001	0.64	RAL-639
491	chrX	4087628	4087655	I-element	29	2	9	27	'4-5	64.44	1.5	3.6	intron	CG43689 +	chrX_9_4085001	chrX_4085001	0.44	RAL-639
492	chrX	4701586	4701638	copia	5	232	8	52	'6-2	62.74	1.6	3.1	3` UTR	ctp +	chrX_8_4700001	chrX_4700001	0.75	RAL-639
493	chrX	4736908	4736924	roo	8687	8671	5	16	'2-3	57.57	3.5	1.1	intergenic	not near genes	chrX_5_4735001	chrX_4735001	0.40	RAL-639
494	chrX	5186870	5186943	roo	402	8666	7	73	'5-2	58.77	3.1	1.7	intron,intron	CG15465 +,rg +	chrX_7_5185001	chrX_5185001	0.71	RAL-639
495	chrX	5257207	5257231	jockey	9	33	10	24	'5-5	57.83	2.6	2.8	intergenic	not near genes	chrX_10_5255001	chrX_5255001	0.50	RAL-639
496	chrX	5366648	5366712	hobo	2938	12	6	64	'3-3	59.68	2.6	1.7	intron	SK +	chrX_6_5365001	chrX_5365001	0.50	RAL-639
497	chrX	5698376	5698422	copia	4884	236	4	46	'2-2	70.00	3.5	0.9	intergenic	CG4096 +	chrX_4_5695001	chrX_5695001	0.50	RAL-639
498	chrX	6041215	6041245	jockey	20	8	12	30	'6-6	64.23	5.7	1.8	intron	CG5937 +	chrX_12_6040001	chrX_6040001	0.50	RAL-639
499	chrX	6313600	6313657	roo	394	8674	7	57	'6-1	68.32	1.7	2.6	intron	CG15894 +	chrX_7_6310001	chrX_6310001	0.86	RAL-639
500	chrX	6417736	6417821	Quasimodo	38	38	4	85	'2-2	64.28	1.7	1.5	intergenic	not near genes	chrX_4_6415001	chrX_6415001	0.50	RAL-639
501	chrX	6538473	6538533	HMS-Beagle	244	19	10	60	'7-3	65.13	3.6	2.2	3` UTR	dx +	chrX_10_6535001	chrX_6535001	0.70	RAL-639
502	chrX	6541900	6541933	flea	4772	4757	9	33	'4-5	69.33	2.4	2.6	intron	CG34417 +	chrX_9_6540001	chrX_6540001	0.44	RAL-639
503	chrX	6573082	6573144	copia	5	244	5	62	'2-3	66.72	3.2	1.2	intron	CG34417 +	chrX_5_6570001	chrX_6570001	0.40	RAL-639
504	chrX	6755731	6755758	transib4	153	180	4	27	'1-3	78.00	4.5	0.7	3` UTR	CG14439 +	chrX_4_6755001	chrX_6755001	0.25	RAL-639
505	chrX	6894563	6894633	copia	250	4874	4	70	'2-2	64.00	1.0	2.0	intergenic	not near genes	chrX_4_6890001	chrX_6890001	0.50	RAL-639
506	chrX	6899448	6899525	297	5	394	14	77	'5-9	68.42	3.1	3.4	intergenic	not near genes	chrX_14_6895001	chrX_6895001	0.36	RAL-639
507	chrX	7273935	7274011	pogo	2098	4	6	76	'3-3	65.47	4.5	1.1	intron	CR44357 -	chrX_6_7270001	chrX_7270001	0.50	RAL-639
508	chrX	7480558	7480599	hobo	2913	3	5	41	'1-4	58.55	1.4	2.1	intergenic	not near genes	chrX_5_7480001	chrX_7480001	0.20	RAL-639
509	chrX	7578579	7578651	pogo	3	2098	8	72	'3-5	67.92	2.7	2.2	intergenic	not near genes	chrX_8_7575001	chrX_7575001	0.38	RAL-639
510	chrX	7794173	7794233	hobo	2928	4	9	60	'5-4	67.71	4.3	1.7	intergenic	not near genes	chrX_9_7790001	chrX_7790001	0.56	RAL-639
511	chrX	7831713	7831782	roo	8662	397	13	69	'4-9	60.62	2.1	4.2	intron	CG1402 +	chrX_13_7830001	chrX_7830001	0.31	RAL-639
512	chrX	8576603	8576664	copia	4877	244	5	61	'3-2	60.80	2.1	1.6	intron	CG12065 +	chrX_5_8575001	chrX_8575001	0.60	RAL-639
513	chrX	8755545	8755610	pogo	16	2098	7	65	'4-3	66.52	6.1	1.0	intergenic	not near genes	chrX_7_8755001	chrX_8755001	0.57	RAL-639
514	chrX	9042325	9042346	P-element	2886	2864	8	21	'6-2	59.10	4.4	1.5	intron,intron	CR43836 -,CG42388 +	chrX_8_9040001	chrX_9040001	0.75	RAL-639
515	chrX	9341794	9341865	roo	401	8664	14	71	'5-9	62.90	1.6	5.4	intron	CG34449 -	chrX_14_9340001	chrX_9340001	0.36	RAL-639
516	chrX	9404188	9404266	mdg3	5253	245	17	78	'9-8	62.24	3.4	3.9	intron	mgl -	chrX_17_9400001	chrX_9400001	0.53	RAL-639
517	chrX	9426010	9426053	mdg1	7058	403	5	43	'1-4	62.67	0.9	2.6	intron	mgl -	chrX_5_9425001	chrX_9425001	0.20	RAL-639
518	chrX	9578749	9578814	pogo	2098	2084	8	65	'6-2	62.01	2.6	2.2	intron	CG32699 -	chrX_8_9575001	chrX_9575001	0.75	RAL-639
519	chrX	10119570	10119626	FB	22	9	10	56	'6-4	56.91	1.7	3.7	intron,intron	RhoU +,CR44894 -	chrX_10_10115001	chrX_10115001	0.60	RAL-639
520	chrX	10281850	10281928	Transpac	310	4923	10	78	'5-5	64.92	1.9	3.4	intron	alpha-Man-I -	chrX_10_10280001	chrX_10280001	0.50	RAL-639
521	chrX	10339806	10339869	hobo	4	2931	6	63	'5-1	64.51	1.7	2.2	intron	CG43740 +	chrX_6_10335001	chrX_10335001	0.83	RAL-639
522	chrX	10341554	10341629	1360	3387	1	18	75	'10-8	66.87	2.8	4.7	intron	CG43740 +	chrX_18_10340001	chrX_10340001	0.56	RAL-639
523	chrX	10682897	10682962	pogo	9	2095	8	65	'6-2	67.17	2.7	2.2	intron	X11Lbeta +	chrX_8_10680001	chrX_10680001	0.75	RAL-639
524	chrX	10717371	10717431	copia	6	249	4	60	'3-1	56.64	4.9	0.7	exon	CG32676 -	chrX_4_10715001	chrX_10715001	0.75	RAL-639
525	chrX	10821130	10821206	roo	410	6	10	76	'7-3	65.68	3.3	2.3	intron	Imp -	chrX_10_10820001	chrX_10820001	0.70	RAL-639
526	chrX	11625802	11625864	FB	8	7	5	62	'3-2	65.04	1.8	1.8	intron	Ptp10D +	chrX_5_11625001	chrX_11625001	0.60	RAL-639
527	chrX	12139346	12139374	accord	7034	7032	4	28	'2-2	78.51	2.6	1.1	intron	Ten-a +	chrX_4_12135001	chrX_12135001	0.50	RAL-639
528	chrX	12240390	12240450	roo	17	405	12	60	'7-5	67.74	2.2	3.8	intron	Ten-a +	chrX_12_12240001	chrX_12240001	0.58	RAL-639
529	chrX	12326145	12326223	copia	4869	253	11	78	'7-4	65.33	2.5	3.1	intron	Ten-a +	chrX_11_12325001	chrX_12325001	0.64	RAL-639
530	chrX	12547903	12547973	hopper	1410	1410	8	70	'3-5	65.09	2.1	2.6	intron	CG43921 -	chrX_8_12545001	chrX_12545001	0.38	RAL-639
531	chrX	12854787	12854802	copia	16	31	4	15	'1-3	64.21	2.4	1.2	intron	Pde9 -	chrX_4_12850001	chrX_12850001	0.25	RAL-639
532	chrX	13375090	13375154	copia	4889	259	8	64	'6-2	68.01	2.1	2.6	intron	CG1640 +	chrX_8_13375001	chrX_13375001	0.75	RAL-639
533	chrX	13441789	13441844	Juan	4206	5	4	55	'1-3	59.02	1.5	1.6	intergenic	not near genes	chrX_4_13440001	chrX_13440001	0.25	RAL-639
534	chrX	13456006	13456064	hobo	2927	4	18	58	'2-16	64.54	3.9	3.7	intron	Neto +	chrX_18_13455001	chrX_13455001	0.11	RAL-639
535	chrX	13483656	13483737	Tirant	3	400	13	81	'7-6	61.04	2.9	3.3	intron	Neto +	chrX_13_13480001	chrX_13480001	0.54	RAL-639
536	chrX	13929673	13929688	3S18	5769	5784	4	15	'2-2	62.04	5.9	0.6	intron	mamo -	chrX_4_13925001	chrX_13925001	0.50	RAL-639
537	chrX	14412839	14412904	hobo	2934	4	9	65	'4-5	65.18	1.7	3.3	intron	dpr8 +	chrX_9_14410001	chrX_14410001	0.44	RAL-639
538	chrX	14858873	14858889	297	392	376	5	16	'1-4	74.14	1.9	1.7	intron	Flo2 +	chrX_5_14855001	chrX_14855001	0.20	RAL-639
539	chrX	14927075	14927103	jockey	4786	4758	5	28	'2-3	69.91	0.3	3.8	intron	Flo2 +	chrX_5_14925001	chrX_14925001	0.40	RAL-639
540	chrX	15188575	15188645	roo	8670	404	11	70	'7-4	65.72	2.4	3.2	3` UTR	CG43737 +	chrX_11_15185001	chrX_15185001	0.64	RAL-639
541	chrX	15286490	15286552	flea	4764	255	4	62	'2-2	61.87	2.5	1.1	intergenic	not near genes	chrX_4_15285001	chrX_15285001	0.50	RAL-639
542	chrX	16218137	16218165	412	7085	4	9	28	'3-6	67.71	2.9	2.3	intergenic	not near genes	chrX_9_16215001	chrX_16215001	0.33	RAL-639
543	chrX	17099124	17099178	opus	475	113	4	54	'1-3	69.59	1.6	1.5	intron	CG4991 +	chrX_4_17095001	chrX_17095001	0.25	RAL-639
544	chrX	17470977	17471060	opus	110	499	14	83	'9-5	69.32	4.2	2.7	intron	CG43658 -	chrX_14_17470001	chrX_17470001	0.64	RAL-639
545	chrX	17829237	17829288	Tabor	17	491	6	51	'4-2	57.61	3.4	1.4	intron	CR44691 -	chrX_6_17825001	chrX_17825001	0.67	RAL-639
546	chrX	17837968	17838037	S-element	3	1706	6	69	'2-4	62.86	2.8	1.6	intron	CG6398 +	chrX_6_17835001	chrX_17835001	0.33	RAL-639
547	chrX	17926581	17926604	pogo	2095	2072	6	23	'1-5	66.67	3.3	1.4	intergenic	not near genes	chrX_6_17925001	chrX_17925001	0.17	RAL-639
548	chrX	18220901	18220928	jockey	33	7	12	27	'8-4	59.82	4.2	2.3	intron	CG33639 -	chrX_12_18220001	chrX_18220001	0.67	RAL-639
549	chrX	18239067	18239092	jockey	4561	4586	7	25	'4-3	63.46	4.4	1.3	intergenic	not near genes	chrX_7_18235001	chrX_18235001	0.57	RAL-639
550	chrX	19276259	19276321	1360	16	3388	15	62	'6-9	64.00	5.1	2.5	5` UTR,intron	CG32537 -,CG32536 -	chrX_15_19275001	chrX_19275001	0.40	RAL-639
551	chrX	19887081	19887130	P-element	2880	22	11	49	'5-6	40.05	5.0	1.8	intron,exon	Hers +,amn -	chrX_11_19885001	chrX_19885001	0.45	RAL-639
552	chrX	20081039	20081110	mdg3	5494	5258	7	71	'3-4	62.42	1.9	2.4	intergenic	not near genes	chrX_7_20080001	chrX_20080001	0.43	RAL-639
553	chrX	20106329	20106356	hopper	6	1382	8	27	'4-4	62.61	4.2	1.5	intergenic	not near genes	chrX_8_20105001	chrX_20105001	0.50	RAL-639
554	chrX	20576686	20576715	hobo	2918	24	5	29	'3-2	68.72	1.2	2.3	intergenic	not near genes	chrX_5_20575001	chrX_20575001	0.60	RAL-639
555	chrX	20852678	20852746	mdg3	5263	248	9	68	'4-5	66.16	1.6	3.5	intron	shakB -	chrX_9_20850001	chrX_20850001	0.44	RAL-639
556	chrX	20852779	20852848	17.6	7410	3	5	69	'2-3	64.98	1.5	2.0	intron	shakB -	chrX_5_20850001	chrX_20850001	0.40	RAL-639
557	chrX	20860999	20861015	BS	24	8	4	16	'2-2	59.47	0.8	2.2	intron	shakB -	chrX_4_20860001	chrX_20860001	0.50	RAL-639
558	chrX	21131847	21131908	FB	14	1	10	61	'2-8	58.65	1.2	4.5	intron	CG34120 +	chrX_10_21130001	chrX_21130001	0.20	RAL-639
559	chrX	21399399	21399462	pogo	2	2082	9	63	'7-2	67.80	3.1	2.2	intergenic	not near genes	chrX_9_21395001	chrX_21395001	0.78	RAL-639
560	chrX	21499250	21499314	Quasimodo	4	7355	4	64	'2-2	67.98	2.2	1.2	intron	CR45082 -	chrX_4_21495001	chrX_21495001	0.50	RAL-639
561	chrX	21582869	21582928	roo	8671	394	4	59	'2-2	62.21	3.1	1.0	intergenic	not near genes	chrX_4_21580001	chrX_21580001	0.50	RAL-639
562	chrX	21667904	21667931	gypsy2	20	3	4	27	'3-1	68.28	6.0	0.6	intergenic	not near genes	chrX_4_21665001	chrX_21665001	0.75	RAL-639
563	chrX	22719026	22719089	roo	9	402	12	63	'7-5	64.94	6.5	1.6	intron	CR44997 +	chrX_12_22715001	chrX_22715001	0.58	RAL-639
564	chrX	22806721	22806742	Burdock	223	245	8	21	'5-3	65.43	2.0	2.7	3` UTR	CR45464 -	chrX_8_22805001	chrX_22805001	0.62	RAL-639
565	chrX	23009960	23010014	Stalker2	381	7251	9	54	'3-6	59.61	2.5	2.6	exon	FucTC -	chrX_9_23005001	chrX_23005001	0.33	RAL-639
566	chrX	23018430	23018476	P-element	22	2885	4	46	'3-1	37.38	2.6	1.1	intergenic	not near genes	chrX_4_23015001	chrX_23015001	0.75	RAL-639
567	chrX	23065002	23065084	Burdock	6136	255	6	82	'2-4	66.03	1.9	2.1	intergenic	not near genes	chrX_6_23065001	chrX_23065001	0.33	RAL-639