SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	131474	131543	Burdock	6387	9	7	69	'6-1	59.81	2.0	2.3	intron	CG11455 +	chr2L_7_130001	chr2L_130001	0.86	RAL-59
2	chr2L	171910	171966	FB	1	20	6	56	'3-3	70.93	3.4	1.4	intron	spen +	chr2L_6_170001	chr2L_170001	0.50	RAL-59
3	chr2L	908300	908381	3S18	5763	341	17	81	'11-6	65.58	4.3	3.2	intergenic	not near genes	chr2L_17_905001	chr2L_905001	0.65	RAL-59
4	chr2L	1075116	1075188	1360	3385	3386	25	72	'15-10	66.95	5.7	3.7	intron	S -	chr2L_25_1075001	chr2L_1075001	0.60	RAL-59
5	chr2L	1340001	1340055	roo	8693	411	7	54	'3-4	67.81	2.5	2.0	intergenic	not near genes	chr2L_7_1340001	chr2L_1340001	0.43	RAL-59
6	chr2L	1486468	1486515	I-element	10	5325	10	47	'9-1	61.24	3.6	2.2	intergenic	not near genes	chr2L_10_1485001	chr2L_1485001	0.90	RAL-59
7	chr2L	1606113	1606159	412	7523	11	6	46	'3-3	65.27	4.8	1.0	intron,intron	haf +,CG31935 -	chr2L_6_1605001	chr2L_1605001	0.50	RAL-59
8	chr2L	2049780	2049832	roo	6	395	10	52	'3-7	63.00	5.8	1.5	intergenic	not near genes	chr2L_10_2045001	chr2L_2045001	0.30	RAL-59
9	chr2L	2174769	2174822	Transpac	4923	5206	7	53	'5-2	65.38	2.4	2.1	intron	aop -	chr2L_7_2170001	chr2L_2170001	0.71	RAL-59
10	chr2L	2208517	2208571	blood	370	7031	9	54	'7-2	61.74	3.3	2.1	exon	CG33124 -	chr2L_9_2205001	chr2L_2205001	0.78	RAL-59
11	chr2L	2313633	2313692	roo	406	20	6	59	'4-2	69.33	0.5	4.0	intron,intron	CG9967 -,eys +	chr2L_6_2310001	chr2L_2310001	0.67	RAL-59
12	chr2L	2327809	2327864	mdg3	5270	5491	6	55	'2-4	57.90	3.1	1.5	intron,intron	CG9967 -,eys +	chr2L_6_2325001	chr2L_2325001	0.33	RAL-59
13	chr2L	2721178	2721242	roo	8678	406	5	64	'1-4	62.13	1.4	2.1	intergenic	not near genes	chr2L_5_2720001	chr2L_2720001	0.20	RAL-59
14	chr2L	2831427	2831489	Burdock	258	23	5	62	'4-1	68.72	2.8	1.3	intergenic	not near genes	chr2L_5_2830001	chr2L_2830001	0.80	RAL-59
15	chr2L	2942420	2942493	opus	496	7	11	73	'4-7	69.61	3.4	2.5	intron	lilli +	chr2L_11_2940001	chr2L_2940001	0.36	RAL-59
16	chr2L	3272220	3272306	mdg3	248	5249	17	86	'8-9	65.38	1.2	7.7	intergenic	CG3347 +	chr2L_17_3270001	chr2L_3270001	0.47	RAL-59
17	chr2L	3427588	3427667	roo	408	1	15	79	'9-6	65.87	3.5	3.3	intergenic	not near genes	chr2L_15_3425001	chr2L_3425001	0.60	RAL-59
18	chr2L	4106414	4106441	jockey	29	6	9	27	'4-5	62.72	3.6	2.0	intron	ed +	chr2L_9_4105001	chr2L_4105001	0.44	RAL-59
19	chr2L	4296125	4296142	I-element	20	3	5	17	'2-3	50.67	3.8	1.0	intron	tutl +	chr2L_5_4295001	chr2L_4295001	0.40	RAL-59
20	chr2L	4409681	4409725	I-element	1	5330	9	44	'6-3	64.48	5.4	1.4	intron	CG15431 -	chr2L_9_4405001	chr2L_4405001	0.67	RAL-59
21	chr2L	4896918	4896990	flea	5006	4757	11	72	'1-10	68.32	3.6	2.4	intron	CG3036 +	chr2L_11_4895001	chr2L_4895001	0.09	RAL-59
22	chr2L	5150953	5151005	3S18	6081	4	7	52	'3-4	63.19	1.4	2.9	intron	Msp300 +	chr2L_7_5150001	chr2L_5150001	0.43	RAL-59
23	chr2L	5307095	5307148	jockey	4765	4978	9	53	'8-1	58.68	4.9	1.5	intron	vri +	chr2L_9_5305001	chr2L_5305001	0.89	RAL-59
24	chr2L	5510865	5510886	McClintock	458	479	4	21	'3-1	67.34	2.4	1.2	intergenic	not near genes	chr2L_4_5510001	chr2L_5510001	0.75	RAL-59
25	chr2L	5606632	5606686	hobo	2929	5	9	54	'3-6	63.79	6.0	1.3	intron	CG14010 -	chr2L_9_5605001	chr2L_5605001	0.33	RAL-59
26	chr2L	5703218	5703278	hobo	2928	6	16	60	'5-11	62.73	3.6	3.5	intergenic	not near genes	chr2L_16_5700001	chr2L_5700001	0.31	RAL-59
27	chr2L	5771431	5771451	Juan	11	31	4	20	'3-1	58.17	3.8	0.8	intron,5` UTR	CG9171 -,CR31912 +	chr2L_4_5770001	chr2L_5770001	0.75	RAL-59
28	chr2L	5805293	5805372	pogo	2	2099	21	79	'9-12	62.36	1.8	7.5	intergenic	CG11034 +	chr2L_21_5805001	chr2L_5805001	0.43	RAL-59
29	chr2L	5811265	5811319	hobo	2	2918	15	54	'7-8	63.47	4.9	2.5	intergenic	CG43307 +,CR44576 +	chr2L_15_5810001	chr2L_5810001	0.47	RAL-59
30	chr2L	6053788	6053849	diver	5889	207	4	61	'3-1	61.67	0.4	2.9	3` UTR	CG9135 +	chr2L_4_6050001	chr2L_6050001	0.75	RAL-59
31	chr2L	7128124	7128190	roo	8664	394	8	66	'2-6	66.54	4.4	1.5	intron	Pvf3 -	chr2L_8_7125001	chr2L_7125001	0.25	RAL-59
32	chr2L	7958597	7958665	412	9	489	11	68	'8-3	61.21	2.8	2.9	intron	Snoo -	chr2L_11_7955001	chr2L_7955001	0.73	RAL-59
33	chr2L	8362476	8362543	P-element	7	4	12	67	'8-4	48.57	3.5	2.7	intergenic	CG7627 -	chr2L_12_8360001	chr2L_8360001	0.67	RAL-59
34	chr2L	8762415	8762486	412	7	7543	7	71	'6-1	61.71	1.4	2.9	intergenic	not near genes	chr2L_7_8760001	chr2L_8760001	0.86	RAL-59
35	chr2L	8992631	8992684	pogo	14	2085	5	53	'3-2	63.36	0.8	2.8	intron	CG9555 +	chr2L_5_8990001	chr2L_8990001	0.60	RAL-59
36	chr2L	9198406	9198489	opus	498	112	13	83	'7-6	65.41	5.1	2.1	intron	tai +	chr2L_13_9195001	chr2L_9195001	0.54	RAL-59
37	chr2L	9309908	9309933	BS	1	23	10	25	'2-8	63.29	9.1	1.0	intergenic	not near genes	chr2L_10_9305001	chr2L_9305001	0.20	RAL-59
38	chr2L	9849128	9849190	copia	8	245	8	62	'6-2	67.17	0.5	5.3	intron	nAChRalpha6 -	chr2L_8_9845001	chr2L_9845001	0.75	RAL-59
39	chr2L	10101208	10101281	hobo	2707	7	15	73	'8-7	64.80	5.0	2.5	intron,exon	CG44153 -,CG34109 +	chr2L_15_10100001	chr2L_10100001	0.53	RAL-59
40	chr2L	10115656	10115738	opus	7498	3	6	82	'2-4	64.89	4.7	1.1	intron,intron	CG44153 -,CG34109 +	chr2L_6_10115001	chr2L_10115001	0.33	RAL-59
41	chr2L	10633261	10633336	412	5	492	18	75	'6-12	58.84	3.5	4.0	intron	CG7329 -	chr2L_18_10630001	chr2L_10630001	0.33	RAL-59
42	chr2L	10778592	10778670	roo	410	8666	14	78	'8-6	66.03	3.9	2.9	intron	CG31869 -	chr2L_14_10775001	chr2L_10775001	0.57	RAL-59
43	chr2L	10873665	10873696	Ivk	32	2	10	31	'6-4	66.42	5.6	1.5	intergenic	not near genes	chr2L_10_10870001	chr2L_10870001	0.60	RAL-59
44	chr2L	11057449	11057520	P-element	6	2886	10	71	'7-3	54.81	3.8	2.1	intron	Samuel -	chr2L_10_11055001	chr2L_11055001	0.70	RAL-59
45	chr2L	11859725	11859793	pogo	2088	1	4	68	'2-2	68.45	0.8	2.2	intron	Pde1c -	chr2L_4_11855001	chr2L_11855001	0.50	RAL-59
46	chr2L	11936717	11936771	Stalker2	7256	7631	6	54	'3-3	60.44	3.5	1.3	exon	Or33b +	chr2L_6_11935001	chr2L_11935001	0.50	RAL-59
47	chr2L	12212504	12212550	412	5	7516	6	46	'4-2	68.00	4.3	1.1	intron	aret +	chr2L_6_12210001	chr2L_12210001	0.67	RAL-59
48	chr2L	12951469	12951535	hopper	1406	5	9	66	'7-2	65.35	2.4	2.6	intergenic	not near genes	chr2L_9_12950001	chr2L_12950001	0.78	RAL-59
49	chr2L	13038240	13038314	3S18	6097	5763	9	74	'1-8	65.14	4.2	1.7	intron	CG9932 -	chr2L_9_13035001	chr2L_13035001	0.11	RAL-59
50	chr2L	13345317	13345395	Tabor	488	6	6	78	'2-4	62.81	2.1	1.9	intergenic	not near genes	chr2L_6_13345001	chr2L_13345001	0.33	RAL-59
51	chr2L	13710969	13711038	G2	2777	3060	8	69	'7-1	62.84	1.6	3.1	intron	CG31814 -	chr2L_8_13710001	chr2L_13710001	0.88	RAL-59
52	chr2L	14010174	14010245	copia	6	252	10	71	'7-3	65.01	3.5	2.2	intergenic	not near genes	chr2L_10_14010001	chr2L_14010001	0.70	RAL-59
53	chr2L	14222376	14222455	opus	3	498	9	79	'4-5	61.82	2.9	2.3	intron	Dyrk2 -	chr2L_9_14220001	chr2L_14220001	0.44	RAL-59
54	chr2L	14313705	14313765	F-element	4675	442	4	60	'2-2	62.28	6.1	0.6	intron	wb +	chr2L_4_14310001	chr2L_14310001	0.50	RAL-59
55	chr2L	14476242	14476294	pogo	2099	29	11	52	'10-1	68.55	4.4	2.0	intergenic	not near genes	chr2L_11_14475001	chr2L_14475001	0.91	RAL-59
56	chr2L	14748821	14748898	opus	3	7500	18	77	'9-9	66.13	4.5	3.3	intergenic	not near genes	chr2L_18_14745001	chr2L_14745001	0.50	RAL-59
57	chr2L	15020496	15020558	hobo	2936	11	7	62	'4-3	62.86	2.6	1.9	intron	GABA-B-R1 +	chr2L_7_15020001	chr2L_15020001	0.57	RAL-59
58	chr2L	15894559	15894618	BS	5078	5072	7	59	'2-5	61.83	2.7	1.9	intergenic	not near genes	chr2L_7_15890001	chr2L_15890001	0.29	RAL-59
59	chr2L	16352317	16352390	P-element	2883	2886	19	73	'10-9	47.36	4.8	3.3	5` UTR,5` UTR	CG42231 -,chif -	chr2L_19_16350001	chr2L_16350001	0.53	RAL-59
60	chr2L	17330920	17330984	mdg1	462	407	10	64	'5-5	59.73	2.9	2.6	intergenic	not near genes	chr2L_10_17330001	chr2L_17330001	0.50	RAL-59
61	chr2L	17543293	17543365	Tirant	2	389	11	72	'7-4	67.70	3.8	2.3	intergenic	not near genes	chr2L_11_17540001	chr2L_17540001	0.64	RAL-59
62	chr2L	17549416	17549484	mdg1	11	7457	13	68	'5-8	62.33	3.1	3.2	intergenic	not near genes	chr2L_13_17545001	chr2L_17545001	0.38	RAL-59
63	chr2L	17556989	17557058	hobo	2	2935	17	69	'9-8	62.17	6.2	2.4	intergenic	not near genes	chr2L_17_17555001	chr2L_17555001	0.53	RAL-59
64	chr2L	18032617	18032649	Rt1b	298	332	9	32	'6-3	63.15	7.4	1.1	intron	rdo +	chr2L_9_18030001	chr2L_18030001	0.67	RAL-59
65	chr2L	18162236	18162309	diver	213	6	6	73	'2-4	62.77	0.9	3.2	intron	CG42750 -	chr2L_6_18160001	chr2L_18160001	0.33	RAL-59
66	chr2L	18570489	18570554	FB	10	2	8	65	'4-4	63.17	0.5	5.3	intron	Pde11 -	chr2L_8_18570001	chr2L_18570001	0.50	RAL-59
67	chr2L	18923890	18923917	F-element	44	21	5	27	'3-2	68.79	5.1	0.8	intron	ssp3 -	chr2L_5_18920001	chr2L_18920001	0.60	RAL-59
68	chr2L	19332418	19332495	opus	6	7500	12	77	'3-9	66.76	1.8	4.3	intergenic	not near genes	chr2L_12_19330001	chr2L_19330001	0.25	RAL-59
69	chr2L	19458534	19458611	hopper	1413	1413	9	77	'5-4	63.53	4.5	1.6	intergenic	not near genes	chr2L_9_19455001	chr2L_19455001	0.56	RAL-59
70	chr2L	20062372	20062407	FB	21	21	4	35	'3-1	70.92	3.1	1.0	intron	lok +	chr2L_4_20060001	chr2L_20060001	0.75	RAL-59
71	chr2L	20097758	20097829	P-element	5	2885	28	71	'11-17	47.44	7.3	3.4	intron	Kua +	chr2L_28_20095001	chr2L_20095001	0.39	RAL-59
72	chr2L	20118382	20118450	copia	249	6	7	68	'2-5	68.76	2.0	2.3	intergenic	not near genes	chr2L_7_20115001	chr2L_20115001	0.29	RAL-59
73	chr2L	20331124	20331195	roo	407	8669	9	71	'5-4	64.73	3.5	2.0	intron	spir +	chr2L_9_20330001	chr2L_20330001	0.56	RAL-59
74	chr2L	20703401	20703435	Max-element	8233	8267	13	34	'5-8	63.56	5.3	2.1	intron	Hr38 -	chr2L_13_20700001	chr2L_20700001	0.38	RAL-59
75	chr2L	20814225	20814296	flea	245	4757	9	71	'2-7	67.81	2.6	2.5	intergenic	CG33322 -,CG9328 +	chr2L_9_20810001	chr2L_20810001	0.22	RAL-59
76	chr2L	20817580	20817629	flea	4991	4766	10	49	'2-8	65.87	2.7	2.7	intergenic	CheB38a -,CheB38b -	chr2L_10_20815001	chr2L_20815001	0.20	RAL-59
77	chr2L	20841959	20841974	G6	2006	2021	4	15	'2-2	56.34	14.2	0.3	intron	CG31676 +	chr2L_4_20840001	chr2L_20840001	0.50	RAL-59
78	chr2L	21871087	21871114	I-element	30	4	6	27	'3-3	63.99	0.6	3.8	intergenic	CR44920 -	chr2L_6_21870001	chr2L_21870001	0.50	RAL-59
79	chr2L	23068854	23068922	1360	2	8	11	68	'5-6	69.13	1.6	4.2	intergenic	CR43242 +,Spf45 -	chr2L_11_23065001	chr2L_23065001	0.45	RAL-59
80	chr2L	23299983	23300000	invader4	3083	341	5	17	'2-3	61.83	3.4	1.1	intergenic	not near genes	chr2L_5_23295001	chr2L_23295001	0.40	RAL-59
81	chr2R	557683	557758	gtwin	471	3	8	75	'4-4	60.17	3.7	1.7	intron	CG40378 +	chr2R_8_555001	chr2R_555001	0.50	RAL-59
82	chr2R	1320689	1320710	diver2	365	4876	8	21	'6-2	56.34	15.0	0.5	intergenic	not near genes	chr2R_8_1320001	chr2R_1320001	0.75	RAL-59
83	chr2R	1365683	1365747	Transpac	4918	293	10	64	'6-4	69.27	2.1	3.2	intron	l(2)41Ab +	chr2R_10_1365001	chr2R_1365001	0.60	RAL-59
84	chr2R	1683369	1683412	1731	310	4344	7	43	'5-2	65.14	2.5	2.0	intron	CG41520 +	chr2R_7_1680001	chr2R_1680001	0.71	RAL-59
85	chr2R	1686590	1686658	roo	401	8669	9	68	'4-5	64.26	5.9	1.3	intron	CG41520 +	chr2R_9_1685001	chr2R_1685001	0.44	RAL-59
86	chr2R	2317736	2317771	Max-element	8270	8234	12	35	'4-8	66.51	4.9	2.0	intergenic	not near genes	chr2R_12_2315001	chr2R_2315001	0.33	RAL-59
87	chr2R	3919665	3919680	1360	3382	22	7	15	'3-4	58.47	5.1	1.1	intron	uex -	chr2R_7_3915001	chr2R_3915001	0.43	RAL-59
88	chr2R	5374146	5374166	1360	3385	3365	10	20	'4-6	61.54	14.0	0.7	intergenic	not near genes	chr2R_10_5370001	chr2R_5370001	0.40	RAL-59
89	chr2R	5413472	5413492	Juan	4039	4023	6	20	'4-2	59.57	1.7	2.2	intergenic	laccase2 +	chr2R_6_5410001	chr2R_5410001	0.67	RAL-59
90	chr2R	5495974	5496036	1360	8	8	13	62	'6-7	66.59	4.2	2.5	intergenic	CG30440 -	chr2R_13_5495001	chr2R_5495001	0.46	RAL-59
91	chr2R	5823655	5823727	roo	8661	397	13	72	'2-11	68.18	1.6	5.0	intron	dpr12 +	chr2R_13_5820001	chr2R_5820001	0.15	RAL-59
92	chr2R	5892084	5892159	412	490	3	9	75	'1-8	65.65	2.8	2.4	intergenic	not near genes	chr2R_9_5890001	chr2R_5890001	0.11	RAL-59
93	chr2R	6438352	6438372	Stalker4	399	379	5	20	'3-2	63.20	15.7	0.3	intergenic	not near genes	chr2R_5_6435001	chr2R_6435001	0.60	RAL-59
94	chr2R	6779771	6779843	17.6	486	2	7	72	'2-5	68.76	3.8	1.5	intron,3` UTR	Epac -,Cyp6a2 -	chr2R_7_6775001	chr2R_6775001	0.29	RAL-59
95	chr2R	6837871	6837941	opus	7113	7491	10	70	'2-8	64.88	2.6	2.8	3` UTR	CG15236 +	chr2R_10_6835001	chr2R_6835001	0.20	RAL-59
96	chr2R	7016948	7017005	1360	16	6	17	57	'9-8	70.54	5.1	2.8	intron	Tsp42Ee +	chr2R_17_7015001	chr2R_7015001	0.53	RAL-59
97	chr2R	7131246	7131321	Transpac	310	4926	19	75	'10-9	63.69	6.6	2.5	intron	Cyp9b2 -	chr2R_19_7130001	chr2R_7130001	0.53	RAL-59
98	chr2R	7231430	7231492	hobo	2935	4	15	62	'5-10	65.00	7.1	1.9	intergenic	not near genes	chr2R_15_7230001	chr2R_7230001	0.33	RAL-59
99	chr2R	7232685	7232714	jockey	35	4	13	29	'6-7	65.12	6.9	1.6	intergenic	Or43a -	chr2R_13_7230001	chr2R_7230001	0.46	RAL-59
100	chr2R	7289295	7289365	Transpac	5228	11	7	70	'6-1	64.13	7.4	0.8	intron	pwn +	chr2R_7_7285001	chr2R_7285001	0.86	RAL-59
101	chr2R	7879792	7879873	412	2	495	18	81	'9-9	60.52	6.1	2.5	intron	Dgk -	chr2R_18_7875001	chr2R_7875001	0.50	RAL-59
102	chr2R	7887244	7887275	jockey	17	5	14	31	'5-9	59.65	6.1	2.0	intergenic	not near genes	chr2R_14_7885001	chr2R_7885001	0.36	RAL-59
103	chr2R	7982246	7982328	opus	7115	7500	13	82	'5-8	68.84	4.1	2.5	intron	ACC -	chr2R_13_7980001	chr2R_7980001	0.38	RAL-59
104	chr2R	8188157	8188224	hobo	1	2929	21	67	'13-8	64.32	4.7	3.7	intron	LRP1 +	chr2R_21_8185001	chr2R_8185001	0.62	RAL-59
105	chr2R	8193397	8193464	Stalker2	7649	11	18	67	'11-7	58.86	4.2	3.5	intron	LRP1 +	chr2R_18_8190001	chr2R_8190001	0.61	RAL-59
106	chr2R	8211378	8211430	mdg3	244	27	8	52	'3-5	71.65	7.0	1.0	intron	LRP1 +	chr2R_8_8210001	chr2R_8210001	0.38	RAL-59
107	chr2R	8786290	8786366	HMS-Beagle	3	7039	8	76	'7-1	65.50	4.1	1.6	intergenic	not near genes	chr2R_8_8785001	chr2R_8785001	0.88	RAL-59
108	chr2R	9151308	9151335	HMS-Beagle	6797	6823	9	27	'6-3	63.52	9.0	0.9	3` UTR	CG30345 +	chr2R_9_9150001	chr2R_9150001	0.67	RAL-59
109	chr2R	9157780	9157799	HMS-Beagle	220	7035	4	19	'2-2	67.00	1.1	1.9	intergenic	CG8008 -	chr2R_4_9155001	chr2R_9155001	0.50	RAL-59
110	chr2R	9559279	9559300	roo	9044	402	5	21	'3-2	63.47	0.3	3.8	3` UTR	CR45281 -	chr2R_5_9555001	chr2R_9555001	0.60	RAL-59
111	chr2R	9968366	9968424	1360	5	3384	7	58	'4-3	59.71	2.8	1.8	3` UTR	CG12133 +	chr2R_7_9965001	chr2R_9965001	0.57	RAL-59
112	chr2R	10134587	10134646	roo	402	8679	9	59	'3-6	69.48	0.5	6.0	intron	gem +	chr2R_9_10130001	chr2R_10130001	0.33	RAL-59
113	chr2R	10670015	10670042	jockey	34	7	10	27	'5-5	58.19	0.9	5.3	intergenic	not near genes	chr2R_10_10670001	chr2R_10670001	0.50	RAL-59
114	chr2R	11374630	11374685	pogo	14	2089	7	55	'6-1	67.33	5.4	1.1	intron	CG13203 +	chr2R_7_11370001	chr2R_11370001	0.86	RAL-59
115	chr2R	11661091	11661159	1360	6	5	16	68	'7-9	68.80	2.1	5.2	intron	Roc2 -	chr2R_16_11660001	chr2R_11660001	0.44	RAL-59
116	chr2R	11948557	11948630	roo	8662	400	20	73	'13-7	66.41	5.6	3.0	intron	CG13188 +	chr2R_20_11945001	chr2R_11945001	0.65	RAL-59
117	chr2R	12042732	12042801	1360	9	1	25	69	'9-16	68.01	4.4	4.6	intergenic	RpIII128 +	chr2R_25_12040001	chr2R_12040001	0.36	RAL-59
118	chr2R	12185331	12185406	accord	7379	2	19	75	'13-6	65.27	5.2	3.1	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_19_12185001	chr2R_12185001	0.68	RAL-59
119	chr2R	13219300	13219355	P-element	4	19	14	55	'9-5	50.83	6.5	1.9	intergenic	CG4630 -,CG4646 -	chr2R_14_13215001	chr2R_13215001	0.64	RAL-59
120	chr2R	13430176	13430254	Tc3	308	239	4	78	'3-1	61.59	2.7	1.1	intron	CG42321 -	chr2R_4_13430001	chr2R_13430001	0.75	RAL-59
121	chr2R	13714852	13714921	Transpac	4930	5227	5	69	'2-3	58.40	3.3	1.2	exon	fas +	chr2R_5_13710001	chr2R_13710001	0.40	RAL-59
122	chr2R	13796921	13796987	Transpac	5216	3	11	66	'5-6	62.86	2.7	3.0	intron	Cpr50Cb +	chr2R_11_13795001	chr2R_13795001	0.45	RAL-59
123	chr2R	14078338	14078410	hopper	1412	5	14	72	'4-10	67.31	2.8	3.7	intron	Prosap -	chr2R_14_14075001	chr2R_14075001	0.29	RAL-59
124	chr2R	14646856	14646925	1360	3386	7	19	69	'6-13	68.58	3.3	4.4	intergenic	not near genes	chr2R_19_14645001	chr2R_14645001	0.32	RAL-59
125	chr2R	15005053	15005076	jockey	4675	4697	7	23	'4-3	61.09	0.0	7.0	intergenic	not near genes	chr2R_7_15005001	chr2R_15005001	0.57	RAL-59
126	chr2R	15049024	15049075	roo	8662	9040	12	51	'9-3	70.58	4.3	2.3	intergenic	not near genes	chr2R_12_15045001	chr2R_15045001	0.75	RAL-59
127	chr2R	15066825	15066888	Transpac	311	20	18	63	'15-3	65.36	4.9	3.1	intergenic	not near genes	chr2R_18_15065001	chr2R_15065001	0.83	RAL-59
128	chr2R	15418377	15418455	hobo	2	2709	23	78	'17-6	59.92	1.9	7.9	intron	CG43729 +	chr2R_23_15415001	chr2R_15415001	0.74	RAL-59
129	chr2R	15445841	15445922	opus	7497	7113	21	81	'13-8	64.43	6.9	2.7	intron	CG43729 +	chr2R_21_15445001	chr2R_15445001	0.62	RAL-59
130	chr2R	15497933	15497984	roo	388	8672	5	51	'1-4	67.90	1.8	1.8	intergenic	not near genes	chr2R_5_15495001	chr2R_15495001	0.20	RAL-59
131	chr2R	15722308	15722381	hopper	1410	1412	12	73	'7-5	64.78	7.5	1.4	intergenic	not near genes	chr2R_12_15720001	chr2R_15720001	0.58	RAL-59
132	chr2R	15726044	15726074	hopper	1383	1413	7	30	'3-4	66.99	1.7	2.6	intergenic	not near genes	chr2R_7_15725001	chr2R_15725001	0.43	RAL-59
133	chr2R	16080540	16080602	roo	408	18	8	62	'4-4	67.83	0.5	5.3	intergenic	not near genes	chr2R_8_16080001	chr2R_16080001	0.50	RAL-59
134	chr2R	16129305	16129381	1360	3387	3388	14	76	'4-10	65.69	3.0	3.5	intron	spin +	chr2R_14_16125001	chr2R_16125001	0.29	RAL-59
135	chr2R	16521627	16521659	hopper	1381	2	7	32	'4-3	61.90	2.2	2.2	intron	Sema-2a +	chr2R_7_16520001	chr2R_16520001	0.57	RAL-59
136	chr2R	17981768	17981838	roo	8672	408	10	70	'6-4	64.89	2.6	2.8	intron	dpr13 -	chr2R_10_17980001	chr2R_17980001	0.60	RAL-59
137	chr2R	18514128	18514155	jockey	10	37	7	27	'1-6	61.35	6.0	1.0	intergenic	CG43066 +	chr2R_7_18510001	chr2R_18510001	0.14	RAL-59
138	chr2R	18694780	18694810	BS	4967	5081	4	30	'2-2	67.34	0.3	3.1	intron	Sik3 +	chr2R_4_18690001	chr2R_18690001	0.50	RAL-59
139	chr2R	18715671	18715687	jockey	4701	4685	7	16	'3-4	59.18	1.2	3.2	intergenic	not near genes	chr2R_7_18715001	chr2R_18715001	0.43	RAL-59
140	chr2R	18766198	18766226	jockey	34	6	15	28	'8-7	52.95	0.6	9.4	intron	Mctp +	chr2R_15_18765001	chr2R_18765001	0.53	RAL-59
141	chr2R	19046363	19046378	opus	7487	499	5	15	'3-2	66.76	4.7	0.9	intergenic	not near genes	chr2R_5_19045001	chr2R_19045001	0.60	RAL-59
142	chr2R	19145829	19145884	Stalker2	7627	7247	8	55	'2-6	65.20	2.9	2.1	intron	ena +	chr2R_8_19145001	chr2R_19145001	0.25	RAL-59
143	chr2R	19166638	19166694	FB	18	2	6	56	'2-4	70.35	2.8	1.6	intron	CG10737 +	chr2R_6_19165001	chr2R_19165001	0.33	RAL-59
144	chr2R	19578013	19578074	hobo	4	2927	21	61	'15-6	59.88	7.1	2.6	intron	sm -	chr2R_21_19575001	chr2R_19575001	0.71	RAL-59
145	chr2R	19645768	19645843	hobo	1	2937	23	75	'12-11	65.83	5.8	3.4	intergenic	not near genes	chr2R_23_19645001	chr2R_19645001	0.52	RAL-59
146	chr2R	19776606	19776629	jockey	295	319	12	23	'4-8	48.96	7.2	1.5	intergenic	not near genes	chr2R_12_19775001	chr2R_19775001	0.33	RAL-59
147	chr2R	19786901	19786976	roo	8664	403	14	75	'10-4	65.97	5.1	2.3	5` UTR	CR45231 +	chr2R_14_19785001	chr2R_19785001	0.71	RAL-59
148	chr2R	20327818	20327870	I-element	5345	6	8	52	'4-4	63.93	3.8	1.7	5` UTR	CG8929 +	chr2R_8_20325001	chr2R_20325001	0.50	RAL-59
149	chr2R	20361091	20361114	Transpac	5223	281	4	23	'1-3	67.00	4.2	0.8	intergenic	not near genes	chr2R_4_20360001	chr2R_20360001	0.25	RAL-59
150	chr2R	20546506	20546573	roo	13	408	6	67	'3-3	66.17	2.8	1.6	intergenic	CG30148 -	chr2R_6_20545001	chr2R_20545001	0.50	RAL-59
151	chr2R	20673647	20673717	1360	3386	6	21	70	'7-14	63.76	1.5	8.4	intergenic	CG30152 +	chr2R_21_20670001	chr2R_20670001	0.33	RAL-59
152	chr2R	21379475	21379520	P-element	1	22	8	45	'6-2	52.49	6.6	1.1	intergenic	cv-2 -	chr2R_8_21375001	chr2R_21375001	0.75	RAL-59
153	chr2R	21464081	21464151	pogo	8	2095	4	70	'3-1	64.34	1.9	1.4	intron	Sdc -	chr2R_4_21460001	chr2R_21460001	0.75	RAL-59
154	chr2R	21850169	21850252	Max-element	8235	303	18	83	'10-8	66.37	4.0	3.6	intergenic	not near genes	chr2R_18_21850001	chr2R_21850001	0.56	RAL-59
155	chr2R	21922143	21922213	roo	8676	409	7	70	'2-5	67.05	2.1	2.3	intron	Fili +	chr2R_7_21920001	chr2R_21920001	0.29	RAL-59
156	chr2R	22340400	22340480	pogo	2099	2	7	80	'2-5	62.86	0.7	4.1	intron	Liprin-gamma -	chr2R_7_22340001	chr2R_22340001	0.29	RAL-59
157	chr2R	22579847	22579897	mdg1	16	406	4	50	'2-2	58.00	2.7	1.1	intron	dnr1 -	chr2R_4_22575001	chr2R_22575001	0.50	RAL-59
158	chr2R	22991100	22991160	roo	402	8678	7	60	'6-1	64.19	1.8	2.5	intron	twi +	chr2R_7_22990001	chr2R_22990001	0.86	RAL-59
159	chr2R	24021567	24021644	pogo	3	2098	12	77	'8-4	67.52	3.4	2.7	intron	CG3907 -	chr2R_12_24020001	chr2R_24020001	0.67	RAL-59
160	chr2R	24132665	24132729	pogo	18	2100	10	64	'3-7	65.11	4.7	1.8	intron	tamo -	chr2R_10_24130001	chr2R_24130001	0.30	RAL-59
161	chr2R	24644930	24645007	roo	405	8663	11	77	'3-8	63.73	2.5	3.1	intergenic	not near genes	chr2R_11_24640001	chr2R_24640001	0.27	RAL-59
162	chr3L	477098	477179	Transpac	4918	307	9	81	'2-7	62.85	5.0	1.5	intron	klar -	chr3L_9_475001	chr3L_475001	0.22	RAL-59
163	chr3L	685732	685805	297	6583	6968	8	73	'6-2	66.66	3.9	1.6	intergenic	ebd1 -,CG3344 -	chr3L_8_685001	chr3L_685001	0.75	RAL-59
164	chr3L	1055696	1055752	copia	239	8	6	56	'2-4	58.67	2.5	1.7	intron	bab1 -	chr3L_6_1055001	chr3L_1055001	0.33	RAL-59
165	chr3L	1628069	1628099	hobo	2	32	15	30	'7-8	69.38	10.2	1.3	intron,5` UTR	GC -,CG13928 -	chr3L_15_1625001	chr3L_1625001	0.47	RAL-59
166	chr3L	1846207	1846289	Burdock	255	6135	6	82	'2-4	66.38	5.7	0.9	intergenic	not near genes	chr3L_6_1845001	chr3L_1845001	0.33	RAL-59
167	chr3L	1979776	1979835	diver	5905	221	8	59	'5-3	60.77	0.7	4.7	intergenic	not near genes	chr3L_8_1975001	chr3L_1975001	0.62	RAL-59
168	chr3L	2655754	2655837	3S18	5765	343	14	83	'13-1	66.03	3.1	3.4	3` UTR	Fife -	chr3L_14_2655001	chr3L_2655001	0.93	RAL-59
169	chr3L	3250577	3250643	P-element	56	1	18	66	'9-9	45.63	9.4	1.7	5` UTR	CR43626 +	chr3L_18_3250001	chr3L_3250001	0.50	RAL-59
170	chr3L	3353156	3353210	pogo	2073	2	5	54	'1-4	68.00	1.9	1.7	intron	kst +	chr3L_5_3350001	chr3L_3350001	0.20	RAL-59
171	chr3L	4025269	4025330	Stalker2	7639	7251	6	61	'3-3	57.80	3.6	1.3	intron	CG11594 -	chr3L_6_4025001	chr3L_4025001	0.50	RAL-59
172	chr3L	4026360	4026421	flea	4758	237	7	61	'6-1	67.58	2.3	2.1	intergenic	CG11594 -,Gr64a +	chr3L_7_4025001	chr3L_4025001	0.86	RAL-59
173	chr3L	4409819	4409878	gtwin	475	6939	10	59	'6-4	67.49	4.0	2.0	intron	DOR +	chr3L_10_4405001	chr3L_4405001	0.60	RAL-59
174	chr3L	4572248	4572299	Transpac	4933	5212	9	51	'5-4	63.90	9.5	0.9	intron	CG42540 +	chr3L_9_4570001	chr3L_4570001	0.56	RAL-59
175	chr3L	4742619	4742677	HMS-Beagle	236	6810	8	58	'4-4	62.79	2.8	2.1	intron	RhoGEF64C +	chr3L_8_4740001	chr3L_4740001	0.50	RAL-59
176	chr3L	4747329	4747388	297	6581	371	14	59	'11-3	69.05	4.2	2.7	intron	RhoGEF64C +	chr3L_14_4745001	chr3L_4745001	0.79	RAL-59
177	chr3L	4969138	4969343	1360	3387	23	14	205	'13-1	64.41	2.7	3.8	intron	Con -	chr3L_14_4965001	chr3L_4965001	0.93	RAL-59
178	chr3L	5000852	5000921	copia	244	4868	5	69	'2-3	65.26	2.4	1.5	intron	Con -	chr3L_5_5000001	chr3L_5000001	0.40	RAL-59
179	chr3L	5085966	5086026	Transpac	4	5218	5	60	'4-1	65.50	3.6	1.1	intergenic	not near genes	chr3L_5_5085001	chr3L_5085001	0.80	RAL-59
180	chr3L	5169392	5169415	412	471	494	7	23	'4-3	60.00	4.2	1.3	intron	shep -	chr3L_7_5165001	chr3L_5165001	0.57	RAL-59
181	chr3L	5236671	5236752	blood	1	379	18	81	'4-14	66.38	2.9	4.6	intron	shep -	chr3L_18_5235001	chr3L_5235001	0.22	RAL-59
182	chr3L	5275676	5275749	1360	3386	3	31	73	'15-16	65.91	5.6	4.7	intron	shep -	chr3L_31_5275001	chr3L_5275001	0.48	RAL-59
183	chr3L	6109378	6109449	hopper	8	1	10	71	'5-5	65.02	3.7	2.1	intron	Ets65A +	chr3L_10_6105001	chr3L_6105001	0.50	RAL-59
184	chr3L	6448647	6448715	hobo	3	2934	27	68	'19-8	61.55	6.1	3.8	intron	CG42747 +	chr3L_27_6445001	chr3L_6445001	0.70	RAL-59
185	chr3L	6561668	6561735	FB	8	2	11	67	'6-5	60.14	5.7	1.6	intron	CG18769 +	chr3L_11_6560001	chr3L_6560001	0.55	RAL-59
186	chr3L	6929919	6929981	412	490	7069	10	62	'5-5	61.21	5.3	1.6	intergenic	not near genes	chr3L_10_6925001	chr3L_6925001	0.50	RAL-59
187	chr3L	7257780	7257849	mdg1	11	420	8	69	'2-6	56.77	3.6	1.7	intron	CG14830 -	chr3L_8_7255001	chr3L_7255001	0.25	RAL-59
188	chr3L	7578281	7578357	roo	4	408	11	76	'3-8	64.16	2.6	3.1	intergenic	not near genes	chr3L_11_7575001	chr3L_7575001	0.27	RAL-59
189	chr3L	7874532	7874592	FB	11	6	12	60	'1-11	58.56	2.9	3.1	intron	CG32365 +	chr3L_12_7870001	chr3L_7870001	0.08	RAL-59
190	chr3L	7881126	7881180	FB	19	3	11	54	'2-9	60.18	2.1	3.5	intron	CG32365 +	chr3L_11_7880001	chr3L_7880001	0.18	RAL-59
191	chr3L	7952947	7952975	Transpac	310	282	6	28	'3-3	70.66	5.3	1.0	intergenic	not near genes	chr3L_6_7950001	chr3L_7950001	0.50	RAL-59
192	chr3L	9033838	9033889	hopper	16	1402	9	51	'5-4	63.79	2.6	2.5	intergenic	not near genes	chr3L_9_9030001	chr3L_9030001	0.56	RAL-59
193	chr3L	9166499	9166568	hobo	2933	3	14	69	'4-10	66.27	3.4	3.2	intron	Rdl -	chr3L_14_9165001	chr3L_9165001	0.29	RAL-59
194	chr3L	9767448	9767490	roo	34	404	4	42	'1-3	67.53	1.4	1.7	intron	CG8177 +	chr3L_4_9765001	chr3L_9765001	0.25	RAL-59
195	chr3L	9858317	9858335	pogo	2084	2100	5	18	'2-3	66.24	1.8	1.8	intron	CG10809 -	chr3L_5_9855001	chr3L_9855001	0.40	RAL-59
196	chr3L	10008502	10008569	copia	248	5	4	67	'1-3	61.53	1.0	2.0	intron	dpr6 +	chr3L_4_10005001	chr3L_10005001	0.25	RAL-59
197	chr3L	10469777	10470007	pogo	2100	16	17	230	'13-4	69.46	2.1	5.5	intergenic	not near genes	chr3L_17_10465001	chr3L_10465001	0.76	RAL-59
198	chr3L	10648969	10649046	Transpac	310	4918	4	77	'3-1	57.67	1.8	1.4	intron	CG32066 -	chr3L_4_10645001	chr3L_10645001	0.75	RAL-59
199	chr3L	10726394	10726409	jockey	4668	4683	10	15	'4-6	61.41	8.3	1.1	intergenic	not near genes	chr3L_10_10725001	chr3L_10725001	0.40	RAL-59
200	chr3L	11046627	11046676	P-element	2	27	12	49	'5-7	46.72	4.4	2.2	intron	CG43693 -	chr3L_12_11045001	chr3L_11045001	0.42	RAL-59
201	chr3L	12050412	12050482	412	6	488	7	70	'6-1	67.05	1.9	2.4	intron	rols -	chr3L_7_12050001	chr3L_12050001	0.86	RAL-59
202	chr3L	12300118	12300147	1360	3	32	9	29	'5-4	63.22	8.4	1.0	intergenic	not near genes	chr3L_9_12300001	chr3L_12300001	0.56	RAL-59
203	chr3L	13156300	13156378	Transpac	2	308	14	78	'4-10	68.37	5.9	2.0	intergenic	not near genes	chr3L_14_13155001	chr3L_13155001	0.29	RAL-59
204	chr3L	13194552	13194582	I-element	32	2	6	30	'3-3	62.45	2.3	1.8	intergenic	not near genes	chr3L_6_13190001	chr3L_13190001	0.50	RAL-59
205	chr3L	13282556	13282589	jockey	5	20	9	33	'3-6	64.89	6.7	1.2	5` UTR	CR43146 +	chr3L_9_13280001	chr3L_13280001	0.33	RAL-59
206	chr3L	13366098	13366227	jockey	4978	34	35	129	'18-17	64.71	3.1	8.5	intergenic	not near genes	chr3L_35_13365001	chr3L_13365001	0.51	RAL-59
207	chr3L	13557574	13557603	copia	4873	4902	4	29	'2-2	71.34	3.2	1.0	intron	bru-3 -	chr3L_4_13555001	chr3L_13555001	0.50	RAL-59
208	chr3L	13595735	13595802	hopper	1411	1405	5	67	'3-2	61.33	4.5	0.9	intron	bru-3 -	chr3L_5_13595001	chr3L_13595001	0.60	RAL-59
209	chr3L	13836976	13837022	Juan	4203	15	6	46	'1-5	64.06	0.9	3.2	intergenic	not near genes	chr3L_6_13835001	chr3L_13835001	0.17	RAL-59
210	chr3L	14424833	14424862	flea	33	4761	9	29	'3-6	67.70	2.3	2.7	intron	bbg -	chr3L_9_14420001	chr3L_14420001	0.33	RAL-59
211	chr3L	14632009	14632064	P-element	22	1	8	55	'6-2	41.88	4.2	1.5	5` UTR	RecQ5 -	chr3L_8_14630001	chr3L_14630001	0.75	RAL-59
212	chr3L	15209797	15209828	Doc	4	35	11	31	'4-7	61.39	8.1	1.2	intergenic	not near genes	chr3L_11_15205001	chr3L_15205001	0.36	RAL-59
213	chr3L	15353972	15354034	roo	19	409	7	62	'3-4	66.10	2.1	2.3	intergenic	not near genes	chr3L_7_15350001	chr3L_15350001	0.43	RAL-59
214	chr3L	15596060	15596130	roo	8663	397	13	70	'7-6	69.44	3.1	3.2	intron	RhoGAP71E +	chr3L_13_15595001	chr3L_15595001	0.54	RAL-59
215	chr3L	15664065	15664146	roo	2	411	16	81	'4-12	66.62	3.2	3.8	intergenic	not near genes	chr3L_16_15660001	chr3L_15660001	0.25	RAL-59
216	chr3L	15894411	15894483	hobo	2936	3	13	72	'7-6	66.11	6.5	1.7	intron	pHCl -	chr3L_13_15890001	chr3L_15890001	0.54	RAL-59
217	chr3L	16807793	16807858	S-element	1705	1708	6	65	'5-1	61.94	3.9	1.2	intron	nudC +	chr3L_6_16805001	chr3L_16805001	0.83	RAL-59
218	chr3L	17141390	17141467	Transpac	4924	310	5	77	'3-2	66.05	3.1	1.2	intron	Rbp6 -	chr3L_5_17140001	chr3L_17140001	0.60	RAL-59
219	chr3L	17331554	17331614	412	12	7537	6	60	'3-3	59.70	4.5	1.1	intergenic	not near genes	chr3L_6_17330001	chr3L_17330001	0.50	RAL-59
220	chr3L	17706383	17706433	Juan	4205	10	5	50	'2-3	62.83	2.9	1.3	intron	Ccn +	chr3L_5_17705001	chr3L_17705001	0.40	RAL-59
221	chr3L	18687600	18687626	F-element	4320	4295	5	26	'3-2	56.00	1.5	2.0	intergenic	not near genes	chr3L_5_18685001	chr3L_18685001	0.60	RAL-59
222	chr3L	19038837	19038914	3S18	5767	340	9	77	'7-2	63.12	1.6	3.5	intron	nkd -	chr3L_9_19035001	chr3L_19035001	0.78	RAL-59
223	chr3L	19237093	19237171	Max-element	5	303	15	78	'7-8	61.25	2.1	4.8	intergenic	CG33647 +	chr3L_15_19235001	chr3L_19235001	0.47	RAL-59
224	chr3L	19437240	19437306	hopper	8	1411	8	66	'3-5	59.07	3.9	1.6	intergenic	not near genes	chr3L_8_19435001	chr3L_19435001	0.38	RAL-59
225	chr3L	20467489	20467505	roo	9054	407	5	16	'2-3	61.50	0.0	5.0	intron	CG5955 +	chr3L_5_20465001	chr3L_20465001	0.40	RAL-59
226	chr3L	20471810	20472078	1360	3387	3388	33	268	'10-23	68.05	2.4	9.7	intron	CG32428 -	chr3L_33_20470001	chr3L_20470001	0.30	RAL-59
227	chr3L	20472439	20472492	3S18	6081	5767	5	53	'1-4	63.52	1.8	1.8	intron	CG32428 -	chr3L_5_20470001	chr3L_20470001	0.20	RAL-59
228	chr3L	20643928	20643957	Doc	30	1	6	29	'4-2	66.22	6.1	0.8	intergenic	not near genes	chr3L_6_20640001	chr3L_20640001	0.67	RAL-59
229	chr3L	21489619	21489685	Transpac	311	4936	10	66	'8-2	65.05	11.1	0.8	exon	Neu2 -	chr3L_10_21485001	chr3L_21485001	0.80	RAL-59
230	chr3L	21954930	21954989	pogo	2078	2	17	59	'5-12	68.71	3.1	4.1	intergenic	CG7458 +	chr3L_17_21950001	chr3L_21950001	0.29	RAL-59
231	chr3L	22158357	22158433	roo	8667	407	7	76	'4-3	68.00	5.0	1.2	intron	olf413 +	chr3L_7_22155001	chr3L_22155001	0.57	RAL-59
232	chr3L	22336748	22336808	hobo	12	2934	23	60	'13-10	67.87	9.6	2.2	intron	Ten-m -	chr3L_23_22335001	chr3L_22335001	0.57	RAL-59
233	chr3L	22338801	22338858	jockey	4991	22	10	57	'1-9	50.75	2.8	2.6	intron	Ten-m -	chr3L_10_22335001	chr3L_22335001	0.10	RAL-59
234	chr3L	22681125	22681158	jockey	4674	4703	12	33	'7-5	63.71	10.4	1.1	intergenic	not near genes	chr3L_12_22680001	chr3L_22680001	0.58	RAL-59
235	chr3L	22695624	22695680	flea	4766	239	8	56	'5-3	71.32	3.6	1.7	intergenic	CG14452 +	chr3L_8_22695001	chr3L_22695001	0.62	RAL-59
236	chr3L	22978482	22978547	S-element	1707	1706	5	65	'4-1	61.79	1.7	1.9	intergenic	not near genes	chr3L_5_22975001	chr3L_22975001	0.80	RAL-59
237	chr3L	22982232	22982257	jockey	34	10	9	25	'5-4	64.29	1.9	3.1	intergenic	not near genes	chr3L_9_22980001	chr3L_22980001	0.56	RAL-59
238	chr3L	24163264	24163313	I-element	5334	1	12	49	'4-8	59.84	1.7	4.4	intron	Snap25 +	chr3L_12_24160001	chr3L_24160001	0.33	RAL-59
239	chr3L	24508967	24509048	412	1	494	5	81	'2-3	65.33	2.0	1.7	intergenic	not near genes	chr3L_5_24505001	chr3L_24505001	0.40	RAL-59
240	chr3L	25412798	25412846	gypsy	6994	7422	8	48	'7-1	65.67	4.0	1.6	intergenic	not near genes	chr3L_8_25410001	chr3L_25410001	0.88	RAL-59
241	chr3L	27174940	27174977	pogo	2069	19	4	37	'1-3	71.57	0.8	2.2	intergenic	not near genes	chr3L_4_27170001	chr3L_27170001	0.25	RAL-59
242	chr3R	902581	902603	R1A1-element	5309	5331	7	22	'5-2	62.89	7.7	0.8	intron	CG42621 +	chr3R_7_900001	chr3R_900001	0.71	RAL-59
243	chr3R	1465884	1465940	gypsy5	6969	415	8	56	'2-6	68.41	4.0	1.6	intergenic	not near genes	chr3R_8_1465001	chr3R_1465001	0.25	RAL-59
244	chr3R	2239359	2239379	HMS-Beagle	258	238	7	20	'4-3	56.95	0.0	7.0	intergenic	not near genes	chr3R_7_2235001	chr3R_2235001	0.57	RAL-59
245	chr3R	3187320	3187380	roo	19	408	5	60	'1-4	64.71	2.2	1.6	intron	CG42617 -	chr3R_5_3185001	chr3R_3185001	0.20	RAL-59
246	chr3R	4741092	4741166	pogo	1	2094	15	74	'6-9	66.87	0.8	8.3	intron	tacc -	chr3R_15_4740001	chr3R_4740001	0.40	RAL-59
247	chr3R	4779357	4779379	297	6581	6603	4	22	'1-3	71.34	2.3	1.2	intron	CG14655 -	chr3R_4_4775001	chr3R_4775001	0.25	RAL-59
248	chr3R	5671391	5671458	1360	4	3383	20	67	'13-7	66.97	5.2	3.2	intron	Atg17 +	chr3R_20_5670001	chr3R_5670001	0.65	RAL-59
249	chr3R	6685963	6685994	Doc	383	414	9	31	'4-5	64.10	2.8	2.4	intergenic	not near genes	chr3R_9_6685001	chr3R_6685001	0.44	RAL-59
250	chr3R	6817268	6817345	roo	8666	408	19	77	'7-12	67.35	5.0	3.2	intergenic	not near genes	chr3R_19_6815001	chr3R_6815001	0.37	RAL-59
251	chr3R	7109840	7109909	P-element	2880	2885	8	69	'5-3	53.87	3.1	2.0	intron	Alh -	chr3R_8_7105001	chr3R_7105001	0.62	RAL-59
252	chr3R	7167434	7167500	roo	394	8664	10	66	'3-7	67.37	3.4	2.3	intron	sas +	chr3R_10_7165001	chr3R_7165001	0.30	RAL-59
253	chr3R	7334312	7334351	roo	8686	9052	4	39	'1-3	66.24	2.2	1.2	intergenic	not near genes	chr3R_4_7330001	chr3R_7330001	0.25	RAL-59
254	chr3R	7436899	7436963	blood	360	7010	15	64	'6-9	65.93	2.9	3.8	intergenic	not near genes	chr3R_15_7435001	chr3R_7435001	0.40	RAL-59
255	chr3R	7492402	7492474	1360	1	6	16	72	'9-7	67.62	3.2	3.8	intron	alpha-Est10 -	chr3R_16_7490001	chr3R_7490001	0.56	RAL-59
256	chr3R	7802503	7802577	Transpac	9	311	5	74	'3-2	63.73	9.1	0.5	5` UTR	CG3014 -	chr3R_5_7800001	chr3R_7800001	0.60	RAL-59
257	chr3R	7874817	7874867	jockey	4667	4985	13	50	'5-8	62.76	4.1	2.5	intron	CG17816 -	chr3R_13_7870001	chr3R_7870001	0.38	RAL-59
258	chr3R	8630220	8630295	297	6582	388	7	75	'6-1	63.73	2.1	2.3	intergenic	5-HT2B +	chr3R_7_8630001	chr3R_8630001	0.86	RAL-59
259	chr3R	8913803	8913829	flea	20	4755	10	26	'5-5	63.92	4.3	1.9	intron	pyd -	chr3R_10_8910001	chr3R_8910001	0.50	RAL-59
260	chr3R	8918202	8918263	FB	15	1	16	61	'9-7	63.85	3.9	3.3	intron	pyd -	chr3R_16_8915001	chr3R_8915001	0.56	RAL-59
261	chr3R	9108997	9109057	412	7068	488	5	60	'3-2	59.87	3.1	1.2	intron	pum -	chr3R_5_9105001	chr3R_9105001	0.60	RAL-59
262	chr3R	9278431	9278501	hobo	2935	4	15	70	'5-10	58.86	2.4	4.4	intergenic	not near genes	chr3R_15_9275001	chr3R_9275001	0.33	RAL-59
263	chr3R	9298640	9298698	hobo	2933	8	9	58	'4-5	61.87	8.1	1.0	intron	CG8861 -	chr3R_9_9295001	chr3R_9295001	0.44	RAL-59
264	chr3R	9353090	9353152	P-element	2878	2	6	62	'4-2	51.77	5.5	0.9	intron	CG45050 +	chr3R_6_9350001	chr3R_9350001	0.67	RAL-59
265	chr3R	9645134	9645208	roo	408	8670	7	74	'3-4	62.48	1.7	2.6	intron,3` UTR	Dh44 +,Fst -	chr3R_7_9645001	chr3R_9645001	0.43	RAL-59
266	chr3R	9864847	9864916	Transpac	310	4932	6	69	'4-2	63.11	2.1	1.9	intron	Teh1 -	chr3R_6_9860001	chr3R_9860001	0.67	RAL-59
267	chr3R	10148744	10148810	mdg3	5259	238	6	66	'5-1	60.45	7.2	0.7	intron	Invadolysin +	chr3R_6_10145001	chr3R_10145001	0.83	RAL-59
268	chr3R	11090188	11090211	roo	9071	9048	5	23	'3-2	66.20	9.5	0.5	intergenic	not near genes	chr3R_5_11090001	chr3R_11090001	0.60	RAL-59
269	chr3R	11126684	11126723	Ivk	5345	2	5	39	'1-4	63.29	3.6	1.1	3` UTR	Ugt86Dd -	chr3R_5_11125001	chr3R_11125001	0.20	RAL-59
270	chr3R	11193963	11193987	mdg3	5255	5277	5	24	'2-3	68.51	6.4	0.7	intergenic	not near genes	chr3R_5_11190001	chr3R_11190001	0.40	RAL-59
271	chr3R	11553659	11553728	hopper	1411	1409	8	69	'5-3	63.71	5.9	1.2	intergenic	CG14708 +	chr3R_8_11550001	chr3R_11550001	0.62	RAL-59
272	chr3R	12130804	12130831	jockey	34	12	5	27	'2-3	65.36	6.9	0.6	intergenic	not near genes	chr3R_5_12130001	chr3R_12130001	0.40	RAL-59
273	chr3R	12134479	12134512	diver	104	137	5	33	'2-3	68.80	1.6	1.9	intergenic	not near genes	chr3R_5_12130001	chr3R_12130001	0.40	RAL-59
274	chr3R	12205988	12206071	flea	4753	251	5	83	'1-4	62.93	5.1	0.8	intergenic	not near genes	chr3R_5_12205001	chr3R_12205001	0.20	RAL-59
275	chr3R	12383284	12383306	F-element	35	13	4	22	'2-2	64.86	8.7	0.4	intergenic	GstD11 +	chr3R_4_12380001	chr3R_12380001	0.50	RAL-59
276	chr3R	12520761	12520819	Burdock	6150	245	8	58	'2-6	66.07	11.1	0.7	intron	Octbeta3R -	chr3R_8_12520001	chr3R_12520001	0.25	RAL-59
277	chr3R	12736664	12736744	roo	8664	408	12	80	'4-8	67.71	9.8	1.1	intergenic	not near genes	chr3R_12_12735001	chr3R_12735001	0.33	RAL-59
278	chr3R	12787359	12787380	jockey	4702	4679	5	21	'2-3	62.97	9.2	0.5	intergenic	not near genes	chr3R_5_12785001	chr3R_12785001	0.40	RAL-59
279	chr3R	13111581	13111648	mdg1	5	7451	5	67	'1-4	60.97	4.7	0.9	intron	timeout +	chr3R_5_13110001	chr3R_13110001	0.20	RAL-59
280	chr3R	13176405	13176428	Gypsy6A_LTR	368	391	5	23	'2-3	60.00	2.6	1.4	intergenic	not near genes	chr3R_5_13175001	chr3R_13175001	0.40	RAL-59
281	chr3R	13344886	13344964	hobo	2707	1	10	78	'4-6	65.88	5.3	1.6	3` UTR	PK2-R1 +	chr3R_10_13340001	chr3R_13340001	0.40	RAL-59
282	chr3R	13543917	13543941	1360	3356	9	4	24	'2-2	64.00	0.6	2.5	intergenic	CG31337 -	chr3R_4_13540001	chr3R_13540001	0.50	RAL-59
283	chr3R	13732431	13732464	jockey	29	6	11	33	'5-6	67.60	5.4	1.7	intron	CG34383 +	chr3R_11_13730001	chr3R_13730001	0.45	RAL-59
284	chr3R	13810055	13810107	Burdock	6381	20	5	52	'3-2	71.17	5.0	0.8	intergenic	not near genes	chr3R_5_13810001	chr3R_13810001	0.60	RAL-59
285	chr3R	13901652	13901723	Tirant	8	8501	5	71	'3-2	63.06	6.9	0.6	intergenic	ems +	chr3R_5_13900001	chr3R_13900001	0.60	RAL-59
286	chr3R	14397227	14397305	Max-element	8236	301	11	78	'7-4	62.86	2.1	3.5	intron	cv-c -	chr3R_11_14395001	chr3R_14395001	0.64	RAL-59
287	chr3R	14869367	14869430	roo	9055	8665	5	63	'2-3	66.59	2.6	1.4	intron	btsz -	chr3R_5_14865001	chr3R_14865001	0.40	RAL-59
288	chr3R	14876970	14877039	Tabor	10	483	8	69	'4-4	61.44	3.1	2.0	intergenic	not near genes	chr3R_8_14875001	chr3R_14875001	0.50	RAL-59
289	chr3R	14963564	14963645	invader4	325	2759	11	81	'3-8	66.86	5.3	1.7	intergenic	not near genes	chr3R_11_14960001	chr3R_14960001	0.27	RAL-59
290	chr3R	15019856	15019899	hobo	2912	8	6	43	'1-5	62.34	3.6	1.3	intergenic	not near genes	chr3R_6_15015001	chr3R_15015001	0.17	RAL-59
291	chr3R	15479231	15479249	297	395	379	4	18	'3-1	70.14	5.9	0.6	intergenic	not near genes	chr3R_4_15475001	chr3R_15475001	0.75	RAL-59
292	chr3R	16577868	16577947	hobo	2708	2	13	79	'6-7	69.36	2.9	3.3	intron	Scp2 -	chr3R_13_16575001	chr3R_16575001	0.46	RAL-59
293	chr3R	16681898	16681965	jockey	4987	4763	14	67	'8-6	62.46	4.0	2.8	intron	Ubx -	chr3R_14_16680001	chr3R_16680001	0.57	RAL-59
294	chr3R	17188596	17188655	roo	8684	409	10	59	'1-9	64.34	2.4	2.9	intron	Mur89F -	chr3R_10_17185001	chr3R_17185001	0.10	RAL-59
295	chr3R	17271958	17272034	hopper	1414	1411	9	76	'7-2	66.58	2.1	2.9	intergenic	not near genes	chr3R_9_17270001	chr3R_17270001	0.78	RAL-59
296	chr3R	17506194	17506268	copia	4868	249	5	74	'4-1	64.73	0.8	2.8	intergenic	not near genes	chr3R_5_17505001	chr3R_17505001	0.80	RAL-59
297	chr3R	17523273	17523343	flea	252	4765	7	70	'2-5	64.09	0.0	7.0	intergenic	not near genes	chr3R_7_17520001	chr3R_17520001	0.29	RAL-59
298	chr3R	17726119	17726199	roo	411	8918	9	80	'3-6	58.95	3.6	2.0	intron	Lgr1 +	chr3R_9_17725001	chr3R_17725001	0.33	RAL-59
299	chr3R	17823630	17823711	mdg1	421	7038	4	81	'3-1	62.23	3.5	0.9	intron	tinc +	chr3R_4_17820001	chr3R_17820001	0.75	RAL-59
300	chr3R	18481852	18481914	P-element	2883	2	11	62	'5-6	51.12	6.7	1.4	intron	fru -	chr3R_11_18480001	chr3R_18480001	0.45	RAL-59
301	chr3R	18519186	18519259	roo	8663	400	11	73	'6-5	64.15	3.9	2.2	intron	fru -	chr3R_11_18515001	chr3R_18515001	0.55	RAL-59
302	chr3R	18929671	18929713	hopper	1408	29	9	42	'4-5	67.98	6.7	1.2	intron	CG42613 +	chr3R_9_18925001	chr3R_18925001	0.44	RAL-59
303	chr3R	20072563	20072633	Burdock	6382	2	9	70	'5-4	68.10	1.8	3.2	intergenic	not near genes	chr3R_9_20070001	chr3R_20070001	0.56	RAL-59
304	chr3R	20124979	20125040	jockey	4986	9	18	61	'2-16	58.52	5.0	3.0	intergenic	not near genes	chr3R_18_20120001	chr3R_20120001	0.11	RAL-59
305	chr3R	20239613	20239688	flea	248	4756	17	75	'3-14	67.36	2.9	4.4	intron	Nlg4 +	chr3R_17_20235001	chr3R_20235001	0.18	RAL-59
306	chr3R	20255344	20255418	opus	498	7	13	74	'9-4	70.96	2.6	3.6	intron	cic +	chr3R_13_20255001	chr3R_20255001	0.69	RAL-59
307	chr3R	20376501	20376567	FB	8	3	13	66	'4-9	67.69	3.5	2.9	intergenic	not near genes	chr3R_13_20375001	chr3R_20375001	0.31	RAL-59
308	chr3R	21092899	21092929	mdg1	419	7427	4	30	'3-1	64.85	4.0	0.8	intron,intron	RhoGAP93B -,CR44178 +	chr3R_4_21090001	chr3R_21090001	0.75	RAL-59
309	chr3R	21271195	21271251	pogo	2090	21	6	56	'5-1	65.56	4.2	1.2	3` UTR,3` UTR	CG5919 +,CG3308 -	chr3R_6_21270001	chr3R_21270001	0.83	RAL-59
310	chr3R	21297050	21297133	Burdock	256	6136	9	83	'2-7	68.39	3.4	2.0	5` UTR	Hsromega +	chr3R_9_21295001	chr3R_21295001	0.22	RAL-59
311	chr3R	21689566	21689621	roo	8672	9053	15	55	'6-9	68.02	5.4	2.3	intron	CG31176 -	chr3R_15_21685001	chr3R_21685001	0.40	RAL-59
312	chr3R	21816202	21816273	hobo	2	2936	23	71	'13-10	66.02	5.6	3.5	intron	CASK -	chr3R_23_21815001	chr3R_21815001	0.57	RAL-59
313	chr3R	22350240	22350300	roo	13	9064	6	60	'2-4	59.78	1.6	2.3	intergenic	not near genes	chr3R_6_22350001	chr3R_22350001	0.33	RAL-59
314	chr3R	22753221	22753299	copia	253	4869	7	78	'1-6	65.86	2.7	1.9	intron,intron	CG7029 +,Usp12-46 +	chr3R_7_22750001	chr3R_22750001	0.14	RAL-59
315	chr3R	23457392	23457413	I-element	2	14	9	21	'5-4	67.59	17.4	0.5	intron	CG4374 -	chr3R_9_23455001	chr3R_23455001	0.56	RAL-59
316	chr3R	23465814	23465868	roo	8682	403	6	54	'1-5	60.68	4.7	1.1	intron	CG4374 -	chr3R_6_23465001	chr3R_23465001	0.17	RAL-59
317	chr3R	23576922	23577003	opus	7500	7116	18	81	'9-9	66.03	4.6	3.2	intron	beat-IV +	chr3R_18_23575001	chr3R_23575001	0.50	RAL-59
318	chr3R	23724096	23724122	Transpac	311	5204	6	26	'2-4	62.96	6.1	0.8	intron	CG10365 +	chr3R_6_23720001	chr3R_23720001	0.33	RAL-59
319	chr3R	23943072	23943128	P-element	1	2868	9	56	'6-3	49.39	4.0	1.8	5` UTR	Gdh -	chr3R_9_23940001	chr3R_23940001	0.67	RAL-59
320	chr3R	24002634	24002653	roo	9048	404	5	19	'2-3	62.13	2.1	1.6	intron	KrT95D -	chr3R_5_24000001	chr3R_24000001	0.40	RAL-59
321	chr3R	24415393	24415418	HMS-Beagle	247	7041	10	25	'4-6	66.24	4.1	2.0	intron	nAChRalpha1 -	chr3R_10_24415001	chr3R_24415001	0.40	RAL-59
322	chr3R	24699621	24699651	hobo	2937	2914	9	30	'4-5	70.13	4.2	1.7	intron	slo +	chr3R_9_24695001	chr3R_24695001	0.44	RAL-59
323	chr3R	24811626	24811678	FB	4	21	9	52	'6-3	66.86	6.0	1.3	intron	CG5807 -	chr3R_9_24810001	chr3R_24810001	0.67	RAL-59
324	chr3R	25508236	25508301	hobo	14	2710	12	65	'5-7	66.13	2.0	4.0	3` UTR	CG5111 +	chr3R_12_25505001	chr3R_25505001	0.42	RAL-59
325	chr3R	25976162	25976221	roo	8661	9047	7	59	'2-5	75.05	3.5	1.6	intron	CG42261 +	chr3R_7_25975001	chr3R_25975001	0.29	RAL-59
326	chr3R	26295658	26295731	hopper	4	5	16	73	'5-11	64.88	5.2	2.6	intergenic	not near genes	chr3R_16_26295001	chr3R_26295001	0.31	RAL-59
327	chr3R	26300530	26300617	springer	388	7136	13	87	'9-4	67.88	2.2	4.1	intergenic	not near genes	chr3R_13_26300001	chr3R_26300001	0.69	RAL-59
328	chr3R	26313805	26313875	hobo	4	2936	14	70	'5-9	65.74	4.5	2.5	intergenic	not near genes	chr3R_14_26310001	chr3R_26310001	0.36	RAL-59
329	chr3R	26314865	26314951	copia	4866	258	11	86	'4-7	70.43	3.0	2.8	intergenic	not near genes	chr3R_11_26310001	chr3R_26310001	0.36	RAL-59
330	chr3R	26431980	26432057	opus	7499	3	4	77	'2-2	63.33	2.5	1.1	intergenic	not near genes	chr3R_4_26430001	chr3R_26430001	0.50	RAL-59
331	chr3R	26465745	26465807	roo	413	8669	12	62	'8-4	65.53	2.1	3.9	intron	CG5455 +	chr3R_12_26465001	chr3R_26465001	0.67	RAL-59
332	chr3R	26581789	26581865	hopper	1413	1414	13	76	'4-9	64.46	4.4	2.4	intron	scrib +	chr3R_13_26580001	chr3R_26580001	0.31	RAL-59
333	chr3R	26682000	26682073	P-element	2886	2883	32	73	'21-11	45.56	8.1	3.5	intergenic	beat-VII -	chr3R_32_26680001	chr3R_26680001	0.66	RAL-59
334	chr3R	26733208	26733240	jockey	5	36	15	32	'6-9	64.81	9.5	1.4	intergenic	not near genes	chr3R_15_26730001	chr3R_26730001	0.40	RAL-59
335	chr3R	26770037	26770055	mdg1	402	7459	9	18	'5-4	58.47	2.6	2.5	intergenic	CR45563 +	chr3R_9_26770001	chr3R_26770001	0.56	RAL-59
336	chr3R	26828721	26828795	Burdock	255	6144	5	74	'3-2	61.07	2.0	1.7	intron	Tl +	chr3R_5_26825001	chr3R_26825001	0.60	RAL-59
337	chr3R	26968386	26968449	FB	8	5	6	63	'3-3	57.78	0.3	4.6	intron	CG5521 +	chr3R_6_26965001	chr3R_26965001	0.50	RAL-59
338	chr3R	27058052	27058076	jockey	8	31	6	24	'3-3	60.49	5.7	0.9	3` UTR	Nep5 -	chr3R_6_27055001	chr3R_27055001	0.50	RAL-59
339	chr3R	27076876	27076952	flea	5007	4755	15	76	'6-9	66.91	4.5	2.7	intron	CG14257 +	chr3R_15_27075001	chr3R_27075001	0.40	RAL-59
340	chr3R	27472840	27472869	Juan	31	5	5	29	'4-1	65.40	5.2	0.8	intergenic	not near genes	chr3R_5_27470001	chr3R_27470001	0.80	RAL-59
341	chr3R	27491576	27491638	hobo	2938	12	14	62	'7-7	67.53	5.1	2.3	intergenic	not near genes	chr3R_14_27490001	chr3R_27490001	0.50	RAL-59
342	chr3R	27535051	27535066	mdg1	7452	399	5	15	'1-4	59.47	2.0	1.7	intergenic	not near genes	chr3R_5_27535001	chr3R_27535001	0.20	RAL-59
343	chr3R	27791275	27791354	Transpac	310	4919	13	79	'6-7	67.87	4.7	2.3	intron	CG34353 -	chr3R_13_27790001	chr3R_27790001	0.46	RAL-59
344	chr3R	27832637	27832692	hobo	6	2922	16	55	'8-8	64.75	4.8	2.8	intron	CG34353 -	chr3R_16_27830001	chr3R_27830001	0.50	RAL-59
345	chr3R	27966510	27966554	Juan	4193	4031	8	44	'4-4	64.45	3.8	1.7	intron	CG4849 +	chr3R_8_27965001	chr3R_27965001	0.50	RAL-59
346	chr3R	28053637	28053713	mdg3	5495	5254	15	76	'2-13	63.13	3.0	3.8	intron	CG34362 +	chr3R_15_28050001	chr3R_28050001	0.13	RAL-59
347	chr3R	28289382	28289432	opus	7115	7468	6	50	'3-3	72.78	3.7	1.3	intergenic	not near genes	chr3R_6_28285001	chr3R_28285001	0.50	RAL-59
348	chr3R	28387021	28387073	roo	408	29	12	52	'7-5	68.75	3.8	2.5	intergenic	not near genes	chr3R_12_28385001	chr3R_28385001	0.58	RAL-59
349	chr3R	28569371	28569482	ZAM	8164	202	4	111	'1-3	66.59	4.4	0.7	intergenic	not near genes	chr3R_4_28565001	chr3R_28565001	0.25	RAL-59
350	chr3R	28804943	28804972	jockey	4670	4699	5	29	'1-4	61.35	3.8	1.0	intergenic	not near genes	chr3R_5_28800001	chr3R_28800001	0.20	RAL-59
351	chr3R	28923586	28923654	mdg3	247	5266	5	68	'2-3	63.04	3.5	1.1	exon	CG11828 +	chr3R_5_28920001	chr3R_28920001	0.40	RAL-59
352	chr3R	28940356	28940371	Rt1a	29	14	4	15	'2-2	53.86	2.8	1.1	intron	CG14521 -	chr3R_4_28940001	chr3R_28940001	0.50	RAL-59
353	chr3R	29422377	29422396	blood	7045	7361	4	19	'1-3	76.00	2.1	1.3	intron	Ptp99A +	chr3R_4_29420001	chr3R_29420001	0.25	RAL-59
354	chr3R	29430166	29430196	jockey	36	8	12	30	'9-3	57.79	7.1	1.5	intron	Ptp99A +	chr3R_12_29430001	chr3R_29430001	0.75	RAL-59
355	chr3R	29475704	29475769	hobo	1	2708	26	65	'22-4	57.22	5.5	4.0	intron	Ptp99A +	chr3R_26_29475001	chr3R_29475001	0.85	RAL-59
356	chr3R	29926693	29926767	opus	6	496	11	74	'4-7	64.97	1.7	4.1	intergenic	not near genes	chr3R_11_29925001	chr3R_29925001	0.36	RAL-59
357	chr3R	29952694	29952779	invader4	2758	324	11	85	'8-3	61.91	3.8	2.3	intron	TkR99D -	chr3R_11_29950001	chr3R_29950001	0.73	RAL-59
358	chr3R	30144359	30144382	flea	4760	25	7	23	'2-5	66.79	0.3	5.4	intron	AdoR -	chr3R_7_30140001	chr3R_30140001	0.29	RAL-59
359	chr3R	30245363	30245428	roo	8671	400	14	65	'3-11	66.10	1.4	5.8	intron	CG9733 -	chr3R_14_30245001	chr3R_30245001	0.21	RAL-59
360	chr3R	30571655	30571721	Burdock	249	6146	4	66	'3-1	65.00	3.5	0.9	intron	tmod +	chr3R_4_30570001	chr3R_30570001	0.75	RAL-59
361	chr3R	30958465	30958542	Max-element	8392	294	16	77	'5-11	59.83	3.8	3.3	intergenic	not near genes	chr3R_16_30955001	chr3R_30955001	0.31	RAL-59
362	chr3R	31196703	31196725	jockey	32	10	6	22	'2-4	60.45	2.0	2.0	intergenic	CG1544 +	chr3R_6_31195001	chr3R_31195001	0.33	RAL-59
363	chr3R	31605448	31605527	Tirant	8	403	22	79	'7-15	64.87	2.6	6.1	intron	CycG -	chr3R_22_31605001	chr3R_31605001	0.32	RAL-59
364	chr3R	31699325	31699389	Transpac	4938	311	13	64	'1-12	69.16	3.6	2.8	intergenic	not near genes	chr3R_13_31695001	chr3R_31695001	0.08	RAL-59
365	chr3R	31815937	31816004	gypsy	451	4	11	67	'5-6	66.05	5.7	1.6	intron	RhoGAP100F +	chr3R_11_31815001	chr3R_31815001	0.45	RAL-59
366	chr4	490260	490578	pogo	25	8	13	318	'12-1	66.58	1.0	6.5	intergenic	not near genes	chr4_13_490001	chr4_490001	0.92	RAL-59
367	chr4	740744	740772	Transpac	309	5200	6	28	'1-5	76.58	3.8	1.2	intron	bt +	chr4_6_740001	chr4_740001	0.17	RAL-59
368	chr4	979798	979881	opus	7113	496	18	83	'7-11	70.30	3.5	4.0	intergenic	not near genes	chr4_18_975001	chr4_975001	0.39	RAL-59
369	chr4	1223799	1223872	HMS-Beagle	244	6803	7	73	'4-3	63.24	0.2	5.8	3` UTR	Mitf +	chr4_7_1220001	chr4_1220001	0.57	RAL-59
370	chrX	548280	548351	hobo	2934	2	19	71	'10-9	63.96	6.1	2.7	intron	Appl +	chrX_19_545001	chrX_545001	0.53	RAL-59
371	chrX	609257	609331	1360	2	3	16	74	'5-11	68.23	3.1	3.9	intron	CG13366 -	chrX_16_605001	chrX_605001	0.31	RAL-59
372	chrX	721146	721197	FB	6	19	7	51	'4-3	64.50	1.6	2.7	intron	sdk +	chrX_7_720001	chrX_720001	0.57	RAL-59
373	chrX	1081363	1081431	roo	8674	406	7	68	'4-3	69.33	3.1	1.7	intron,intron	CR44779 +,CG3655 -	chrX_7_1080001	chrX_1080001	0.57	RAL-59
374	chrX	1517930	1517985	jockey	4977	20	10	55	'3-7	64.08	4.6	1.8	intergenic	inc +	chrX_10_1515001	chrX_1515001	0.30	RAL-59
375	chrX	1616689	1616771	Burdock	6136	256	10	82	'4-6	65.70	4.0	2.0	intron,intron	Mur2B -,br +	chrX_10_1615001	chrX_1615001	0.40	RAL-59
376	chrX	2464730	2464802	FB	2	2	9	72	'6-3	64.58	3.6	2.0	intron	boi -	chrX_9_2460001	chrX_2460001	0.67	RAL-59
377	chrX	2585478	2585532	412	7541	7075	5	54	'3-2	62.13	0.6	3.1	intron	CG13760 -	chrX_5_2585001	chrX_2585001	0.60	RAL-59
378	chrX	2685383	2685438	P-element	1	22	12	55	'6-6	45.47	1.3	5.2	intergenic	per +	chrX_12_2685001	chrX_2685001	0.50	RAL-59
379	chrX	2839534	2839606	mdg3	5259	245	4	72	'3-1	61.87	2.5	1.1	intron	kirre +	chrX_4_2835001	chrX_2835001	0.75	RAL-59
380	chrX	2893868	2893913	blood	376	7046	7	45	'4-3	67.64	4.6	1.2	intron,exon	kirre +,CG3526 +	chrX_7_2890001	chrX_2890001	0.57	RAL-59
381	chrX	3629493	3629578	flea	256	4754	7	85	'2-5	70.23	3.2	1.7	intron	AstA-R1 +	chrX_7_3625001	chrX_3625001	0.29	RAL-59
382	chrX	4304416	4304496	mdg3	5255	248	12	80	'3-9	63.85	2.0	4.0	intergenic	not near genes	chrX_12_4300001	chrX_4300001	0.25	RAL-59
383	chrX	4719654	4719711	roo	8679	400	5	57	'1-4	58.56	0.8	2.8	intron	Proc-R +	chrX_5_4715001	chrX_4715001	0.20	RAL-59
384	chrX	4909794	4909875	Burdock	6136	6390	9	81	'6-3	68.89	1.9	3.1	exon	CG32772 +	chrX_9_4905001	chrX_4905001	0.67	RAL-59
385	chrX	5836531	5836559	3S18	30	5764	5	28	'2-3	63.51	2.9	1.3	intron	CG15765 +	chrX_5_5835001	chrX_5835001	0.40	RAL-59
386	chrX	6403281	6403348	roo	395	8664	7	67	'5-2	63.05	1.2	3.2	intergenic	not near genes	chrX_7_6400001	chrX_6400001	0.71	RAL-59
387	chrX	6409223	6409299	Transpac	311	7	10	76	'5-5	69.88	5.0	1.7	intergenic	not near genes	chrX_10_6405001	chrX_6405001	0.50	RAL-59
388	chrX	6755732	6755757	transib4	154	179	6	25	'2-4	77.37	3.1	1.5	3` UTR	CG14439 +	chrX_6_6755001	chrX_6755001	0.33	RAL-59
389	chrX	6795443	6795525	flea	256	4757	12	82	'3-9	69.81	3.0	3.0	intron	C3G -	chrX_12_6795001	chrX_6795001	0.25	RAL-59
390	chrX	6863482	6863539	Transpac	23	5227	9	57	'1-8	63.92	1.7	3.3	intron	CG14434 -	chrX_9_6860001	chrX_6860001	0.11	RAL-59
391	chrX	7381201	7381230	I-element	3	31	8	29	'4-4	65.79	2.9	2.1	intron,intron	CR44357 -,CG1677 -	chrX_8_7380001	chrX_7380001	0.50	RAL-59
392	chrX	7382230	7382291	FB	12	4	6	61	'4-2	57.91	2.9	1.5	intron,intron	CR44357 -,CG1677 -	chrX_6_7380001	chrX_7380001	0.67	RAL-59
393	chrX	7878058	7878116	Transpac	5213	4924	8	58	'3-5	64.56	4.3	1.5	exon	Ir7d -	chrX_8_7875001	chrX_7875001	0.38	RAL-59
394	chrX	7945028	7945099	P-element	2	2883	20	71	'7-13	51.84	5.1	3.3	intron,intron	CG42593 +,l(1)G0193 -	chrX_20_7945001	chrX_7945001	0.35	RAL-59
395	chrX	7995343	7995380	hobo	2916	17	9	37	'2-7	68.99	2.8	2.4	intergenic	Tbh +	chrX_9_7995001	chrX_7995001	0.22	RAL-59
396	chrX	8027479	8027496	Juan	19	3	4	17	'2-2	63.19	2.2	1.2	intergenic	Tbh +	chrX_4_8025001	chrX_8025001	0.50	RAL-59
397	chrX	8090737	8090763	jockey	4760	4788	7	26	'2-5	67.22	2.8	1.8	intron	Ubc-E2H -	chrX_7_8090001	chrX_8090001	0.29	RAL-59
398	chrX	8272607	8272663	S-element	1700	1704	5	56	'3-2	61.12	2.5	1.4	exon	CG15343 -	chrX_5_8270001	chrX_8270001	0.60	RAL-59
399	chrX	8326735	8326790	jockey	4677	4983	7	55	'5-2	58.03	1.0	3.5	intron	nAChRalpha3 -	chrX_7_8325001	chrX_8325001	0.71	RAL-59
400	chrX	9019179	9019252	roo	2	403	6	73	'4-2	66.83	2.5	1.7	intron,intron	rdgA +,CR43836 -	chrX_6_9015001	chrX_9015001	0.67	RAL-59
401	chrX	9383044	9383118	mdg3	248	5261	14	74	'7-7	59.12	2.8	3.7	intron	mgl -	chrX_14_9380001	chrX_9380001	0.50	RAL-59
402	chrX	9468178	9468220	hobo	2	2906	12	42	'9-3	64.55	7.4	1.4	intron	mgl -	chrX_12_9465001	chrX_9465001	0.75	RAL-59
403	chrX	9522829	9522902	hobo	2938	3	9	73	'1-8	60.79	3.6	2.0	intron	CG32700 -	chrX_9_9520001	chrX_9520001	0.11	RAL-59
404	chrX	9600626	9600657	jockey	4763	4765	12	31	'4-8	65.78	8.6	1.2	intergenic	Gga +	chrX_12_9600001	chrX_9600001	0.33	RAL-59
405	chrX	10201721	10201804	mdg3	247	5251	16	83	'7-9	66.98	5.5	2.5	intron	CR44894 -	chrX_16_10200001	chrX_10200001	0.44	RAL-59
406	chrX	10757723	10757774	jockey	4999	4671	6	51	'3-3	53.99	6.7	0.8	intergenic	Rph -	chrX_6_10755001	chrX_10755001	0.50	RAL-59
407	chrX	10784706	10784780	1360	3	2	19	74	'11-8	64.38	5.7	2.8	intron,intron	Ant2 -,sesB -	chrX_19_10780001	chrX_10780001	0.58	RAL-59
408	chrX	11296410	11296437	BS	4994	5021	4	27	'2-2	63.34	4.2	0.8	intron	CG44422 -	chrX_4_11295001	chrX_11295001	0.50	RAL-59
409	chrX	12041517	12041594	297	6582	6971	11	77	'4-7	66.81	3.8	2.3	intergenic	not near genes	chrX_11_12040001	chrX_12040001	0.36	RAL-59
410	chrX	12529735	12529788	3S18	8	321	4	53	'3-1	58.00	1.4	1.7	intron	CG43921 -	chrX_4_12525001	chrX_12525001	0.75	RAL-59
411	chrX	13141526	13141586	hobo	2933	4	15	60	'5-10	59.01	3.1	3.7	intron	CG32645 +	chrX_15_13140001	chrX_13140001	0.33	RAL-59
412	chrX	13155910	13155980	Burdock	11	6390	9	70	'2-7	64.01	3.5	2.0	exon	CG4332 +	chrX_9_13155001	chrX_13155001	0.22	RAL-59
413	chrX	13450940	13450995	Transpac	11	5213	4	55	'1-3	60.00	0.4	2.9	intron	Neto +	chrX_4_13450001	chrX_13450001	0.25	RAL-59
414	chrX	13484174	13484239	roo	409	8680	14	65	'9-5	65.09	3.9	2.9	intron	Neto +	chrX_14_13480001	chrX_13480001	0.64	RAL-59
415	chrX	13699865	13699926	P-element	2874	1	18	61	'10-8	46.57	1.6	6.9	intron,intron	CG9940 -,NnaD +	chrX_18_13695001	chrX_13695001	0.56	RAL-59
416	chrX	13762065	13762110	P-element	2857	2884	10	45	'5-5	45.90	4.0	2.0	intergenic	not near genes	chrX_10_13760001	chrX_13760001	0.50	RAL-59
417	chrX	13902386	13902421	roo	8697	8662	12	35	'6-6	65.65	3.4	2.7	intron	mamo -	chrX_12_13900001	chrX_13900001	0.50	RAL-59
418	chrX	13932999	13933071	mdg3	5252	5489	12	72	'7-5	65.58	3.3	2.8	intron	mamo -	chrX_12_13930001	chrX_13930001	0.58	RAL-59
419	chrX	14152064	14152114	mdg1	16	407	7	50	'2-5	61.81	3.1	1.7	intergenic	CG12479 -	chrX_7_14150001	chrX_14150001	0.29	RAL-59
420	chrX	14291407	14291458	hopper	25	5	8	51	'3-5	64.17	2.6	2.2	intergenic	not near genes	chrX_8_14290001	chrX_14290001	0.38	RAL-59
421	chrX	15369091	15369171	mdg3	5251	5496	5	80	'3-2	71.12	1.3	2.2	intron	acj6 -	chrX_5_15365001	chrX_15365001	0.60	RAL-59
422	chrX	16190855	16190923	mdg3	5253	5486	4	68	'3-1	63.34	2.0	1.3	intergenic	mir-985 -	chrX_4_16190001	chrX_16190001	0.75	RAL-59
423	chrX	16764053	16764099	roo	393	19	7	46	'3-4	66.23	0.2	5.8	intron	if -	chrX_7_16760001	chrX_16760001	0.43	RAL-59
424	chrX	17561721	17561786	Tirant	24	404	12	65	'6-6	70.74	4.1	2.4	intergenic	not near genes	chrX_12_17560001	chrX_17560001	0.50	RAL-59
425	chrX	18182149	18182212	mdg1	416	7049	4	63	'3-1	60.20	0.3	3.1	intron	Frq2 +	chrX_4_18180001	chrX_18180001	0.75	RAL-59
426	chrX	18193721	18193798	hopper	2	1413	13	77	'9-4	65.48	4.0	2.6	intron	Frq2 +	chrX_13_18190001	chrX_18190001	0.69	RAL-59
427	chrX	19298092	19298160	P-element	2880	2884	9	68	'5-4	43.76	5.3	1.4	5` UTR	CG8034 -	chrX_9_19295001	chrX_19295001	0.56	RAL-59
428	chrX	20346657	20346740	Stalker2	7248	405	10	83	'2-8	66.23	2.7	2.7	intergenic	not near genes	chrX_10_20345001	chrX_20345001	0.20	RAL-59
429	chrX	20373162	20373230	roo	408	11	8	68	'5-3	66.44	0.8	4.4	intergenic	not near genes	chrX_8_20370001	chrX_20370001	0.62	RAL-59
430	chrX	20483609	20483690	roo	8663	408	9	81	'8-1	67.62	2.5	2.6	intron	RhoGAP19D -	chrX_9_20480001	chrX_20480001	0.89	RAL-59
431	chrX	21087581	21087612	mdg3	5252	31	8	31	'4-4	63.41	1.1	3.8	intergenic	not near genes	chrX_8_21085001	chrX_21085001	0.50	RAL-59
432	chrX	21122843	21122908	Bari1	18	1705	4	65	'1-3	64.33	1.0	2.0	intergenic	not near genes	chrX_4_21120001	chrX_21120001	0.25	RAL-59
433	chrX	21399430	21399470	pogo	33	2091	7	40	'4-3	69.38	2.1	2.3	intergenic	not near genes	chrX_7_21395001	chrX_21395001	0.57	RAL-59
434	chrX	21474419	21474434	1731	13	26	6	15	'3-3	71.63	9.9	0.6	intergenic	not near genes	chrX_6_21470001	chrX_21470001	0.50	RAL-59
435	chrX	21667903	21667933	gypsy2	6516	2	10	30	'5-5	67.98	0.0	10.0	intergenic	not near genes	chrX_10_21665001	chrX_21665001	0.50	RAL-59
436	chrX	22517615	22517682	1360	26	1	11	67	'4-7	60.33	1.2	5.0	intron	CG17600 +	chrX_11_22515001	chrX_22515001	0.36	RAL-59
437	chrY	975605	975620	G2	2821	2805	4	15	'1-3	62.83	57.2	0.1	intergenic	not near genes	chrY_4_975001	chrY_975001	0.25	RAL-59