SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 162046 162160 1360 3386 3387 30 114 '15-15 70.52 10.0 2.7 intron spen + chr2L_30_160001 chr2L_160001 0.50 RAL-584_95b 2 chr2L 833304 833338 jockey 11 12 8 34 '5-3 53.49 13.7 0.5 intergenic dock +,drongo - chr2L_8_830001 chr2L_830001 0.62 RAL-584_95b 3 chr2L 1074612 1074683 FB 26 3 18 71 '10-8 65.92 6.7 2.3 intron S - chr2L_18_1070001 chr2L_1070001 0.56 RAL-584_95b 4 chr2L 1319884 1319995 hobo 2709 9 22 111 '6-16 66.76 8.1 2.4 intergenic not near genes chr2L_22_1315001 chr2L_1315001 0.27 RAL-584_95b 5 chr2L 1554334 1554444 rover 11 346 32 110 '17-15 65.78 8.7 3.3 intergenic not near genes chr2L_32_1550001 chr2L_1550001 0.53 RAL-584_95b 6 chr2L 1832812 1832878 hobo 2909 22 6 66 '4-2 63.26 10.2 0.5 intergenic c-cup - chr2L_6_1830001 chr2L_1830001 0.67 RAL-584_95b 7 chr2L 2005419 2005504 412 9 7541 23 85 '12-11 65.48 13.0 1.6 intron CG33543 - chr2L_23_2005001 chr2L_2005001 0.52 RAL-584_95b 8 chr2L 2176391 2176473 S-element 4 38 15 82 '11-4 63.38 5.4 2.3 intron aop - chr2L_15_2175001 chr2L_2175001 0.73 RAL-584_95b 9 chr2L 2252975 2253060 roo 13 406 21 85 '8-13 62.61 2.8 5.5 intergenic CG17234 + chr2L_21_2250001 chr2L_2250001 0.38 RAL-584_95b 10 chr2L 2591993 2592114 roo 1 410 22 121 '15-7 66.12 10.0 2.0 5` UTR CG15394 + chr2L_22_2590001 chr2L_2590001 0.68 RAL-584_95b 11 chr2L 2621550 2621596 BS 5059 5044 12 46 '7-5 63.27 5.0 2.0 intergenic not near genes chr2L_12_2620001 chr2L_2620001 0.58 RAL-584_95b 12 chr2L 3102570 3102643 mdg1 6 7447 16 73 '4-12 62.69 6.7 2.1 intron toc - chr2L_16_3100001 chr2L_3100001 0.25 RAL-584_95b 13 chr2L 3144740 3144856 P-element 1 2886 35 116 '22-13 50.26 9.0 3.5 5` UTR toc - chr2L_35_3140001 chr2L_3140001 0.63 RAL-584_95b 14 chr2L 3440477 3440525 Juan 52 4 6 48 '1-5 69.39 9.6 0.6 intergenic not near genes chr2L_6_3440001 chr2L_3440001 0.17 RAL-584_95b 15 chr2L 3478109 3478219 P-element 7 1 20 110 '10-10 50.76 12.3 1.5 intergenic Thor +,CR43928 + chr2L_20_3475001 chr2L_3475001 0.50 RAL-584_95b 16 chr2L 3908477 3908522 jockey 14 14 14 45 '7-7 62.64 9.8 1.3 intron fred - chr2L_14_3905001 chr2L_3905001 0.50 RAL-584_95b 17 chr2L 4039202 4039321 roo 408 1 29 119 '11-18 65.23 5.8 4.3 intron ed + chr2L_29_4035001 chr2L_4035001 0.38 RAL-584_95b 18 chr2L 4415818 4415857 jockey 8 7 10 39 '5-5 57.53 7.7 1.1 intron CG15431 - chr2L_10_4415001 chr2L_4415001 0.50 RAL-584_95b 19 chr2L 4434244 4434333 FB 9 19 19 89 '9-10 65.26 8.8 1.9 intron,intron,intron CG15431 -,CG34177 +,CG34178 + chr2L_19_4430001 chr2L_4430001 0.47 RAL-584_95b 20 chr2L 4633840 4633923 roo 8673 9059 19 83 '5-14 66.00 10.2 1.7 intergenic CR45452 - chr2L_19_4630001 chr2L_4630001 0.26 RAL-584_95b 21 chr2L 4785586 4785668 Stalker2 394 7278 14 82 '6-8 61.65 10.7 1.2 intron CG15630 - chr2L_14_4785001 chr2L_4785001 0.43 RAL-584_95b 22 chr2L 5603647 5603727 BS 8 5102 17 80 '12-5 64.78 6.1 2.4 intron CG14010 - chr2L_17_5600001 chr2L_5600001 0.71 RAL-584_95b 23 chr2L 5608527 5608698 INE-1 96 84 5 171 '4-1 65.62 2.9 1.3 intron CG14010 - chr2L_5_5605001 chr2L_5605001 0.80 RAL-584_95b 24 chr2L 5756723 5756750 jockey 4946 4973 6 27 '3-3 53.16 4.6 1.1 intron CG11030 + chr2L_6_5755001 chr2L_5755001 0.50 RAL-584_95b 25 chr2L 5805221 5805260 jockey 11 25 10 39 '4-6 53.93 18.1 0.5 intergenic CG11034 + chr2L_10_5805001 chr2L_5805001 0.40 RAL-584_95b 26 chr2L 6349116 6349251 roo 9064 8661 25 135 '12-13 72.16 4.6 4.5 intergenic CG9498 - chr2L_25_6345001 chr2L_6345001 0.48 RAL-584_95b 27 chr2L 6594247 6594330 hobo 7 2920 18 83 '11-7 65.76 11.8 1.4 intron CG11319 - chr2L_18_6590001 chr2L_6590001 0.61 RAL-584_95b 28 chr2L 7003720 7003817 roo 403 8682 22 97 '12-10 64.40 11.1 1.8 intron uif - chr2L_22_7000001 chr2L_7000001 0.55 RAL-584_95b 29 chr2L 7196450 7196520 mdg1 22 7058 4 70 '3-1 70.58 6.3 0.5 exon CG4502 - chr2L_4_7195001 chr2L_7195001 0.75 RAL-584_95b 30 chr2L 7430984 7431030 jockey 56 9 11 46 '8-3 61.72 15.4 0.7 intron CG5958 - chr2L_11_7430001 chr2L_7430001 0.73 RAL-584_95b 31 chr2L 7639203 7639310 roo 9064 6 32 107 '16-16 63.02 9.5 3.0 intergenic not near genes chr2L_32_7635001 chr2L_7635001 0.50 RAL-584_95b 32 chr2L 7937310 7937353 jockey 4766 4784 12 43 '3-9 61.64 8.1 1.3 intron Snoo - chr2L_12_7935001 chr2L_7935001 0.25 RAL-584_95b 33 chr2L 8298946 8299056 S-element 1704 1714 19 110 '7-12 64.88 7.1 2.3 intron Btk29A - chr2L_19_8295001 chr2L_8295001 0.37 RAL-584_95b 34 chr2L 8573444 8573546 3S18 334 5770 27 102 '12-15 67.34 7.6 3.1 intron Sema-1a + chr2L_27_8570001 chr2L_8570001 0.44 RAL-584_95b 35 chr2L 8977399 8977516 roo 8664 405 28 117 '12-16 67.37 8.3 3.0 intergenic CG13101 - chr2L_28_8975001 chr2L_8975001 0.43 RAL-584_95b 36 chr2L 9153532 9153630 copia 250 17 19 98 '16-3 59.84 10.7 1.6 intron CG32982 + chr2L_19_9150001 chr2L_9150001 0.84 RAL-584_95b 37 chr2L 9256410 9256507 hobo 5 2923 24 97 '20-4 61.84 8.1 2.6 intergenic Ggamma30A + chr2L_24_9255001 chr2L_9255001 0.83 RAL-584_95b 38 chr2L 9355595 9355643 Doc 51 3 14 48 '8-6 61.37 8.8 1.4 intergenic not near genes chr2L_14_9355001 chr2L_9355001 0.57 RAL-584_95b 39 chr2L 9439912 9440015 FB 6 7 14 103 '8-6 67.50 9.7 1.3 intron numb + chr2L_14_9435001 chr2L_9435001 0.57 RAL-584_95b 40 chr2L 10780215 10780316 412 7070 7543 27 101 '14-13 63.59 4.0 5.4 intron CG31869 - chr2L_27_10780001 chr2L_10780001 0.52 RAL-584_95b 41 chr2L 11289125 11289207 412 7073 7539 18 82 '10-8 64.64 5.8 2.6 intergenic not near genes chr2L_18_11285001 chr2L_11285001 0.56 RAL-584_95b 42 chr2L 11712248 11712333 hobo 2937 31 9 85 '4-5 65.74 4.8 1.6 intergenic not near genes chr2L_9_11710001 chr2L_11710001 0.44 RAL-584_95b 43 chr2L 11909536 11909638 hobo 14 2937 19 102 '13-6 64.04 10.0 1.7 intron Pde1c - chr2L_19_11905001 chr2L_11905001 0.68 RAL-584_95b 44 chr2L 12349452 12349550 297 394 6589 30 98 '19-11 64.61 5.2 4.8 intron bru-2 + chr2L_30_12345001 chr2L_12345001 0.63 RAL-584_95b 45 chr2L 13154220 13154276 Juan 10 4200 8 56 '2-6 59.80 1.0 4.0 intergenic not near genes chr2L_8_13150001 chr2L_13150001 0.25 RAL-584_95b 46 chr2L 13611552 13611665 1360 5 1 23 113 '11-12 63.67 7.8 2.6 intron kuz + chr2L_23_13610001 chr2L_13610001 0.48 RAL-584_95b 47 chr2L 13679244 13679335 roo 17 409 20 91 '13-7 68.29 10.7 1.7 intron CG31814 - chr2L_20_13675001 chr2L_13675001 0.65 RAL-584_95b 48 chr2L 13731345 13731429 hobo 3 2931 23 84 '8-15 61.56 2.1 7.4 intergenic not near genes chr2L_23_13730001 chr2L_13730001 0.35 RAL-584_95b 49 chr2L 14074144 14074258 flea 4762 5010 14 114 '7-7 67.62 4.2 2.7 intron nAChRalpha5 + chr2L_14_14070001 chr2L_14070001 0.50 RAL-584_95b 50 chr2L 14095268 14095386 412 494 4 31 118 '17-14 66.09 9.3 3.0 intergenic not near genes chr2L_31_14095001 chr2L_14095001 0.55 RAL-584_95b 51 chr2L 14197922 14198030 pogo 6 2097 6 108 '4-2 63.27 5.5 0.9 intron Dyrk2 - chr2L_6_14195001 chr2L_14195001 0.67 RAL-584_95b 52 chr2L 14283521 14283625 opus 8 7491 23 104 '9-14 65.51 7.6 2.7 intron wb + chr2L_23_14280001 chr2L_14280001 0.39 RAL-584_95b 53 chr2L 14412024 14412127 hopper 16 1413 26 103 '9-17 61.82 8.3 2.8 intergenic not near genes chr2L_26_14410001 chr2L_14410001 0.35 RAL-584_95b 54 chr2L 14427454 14427553 opus 7483 2 13 99 '3-10 60.02 4.7 2.3 intergenic not near genes chr2L_13_14425001 chr2L_14425001 0.23 RAL-584_95b 55 chr2L 14517880 14517980 Max-element 8250 8530 13 100 '6-7 60.86 8.8 1.3 intergenic not near genes chr2L_13_14515001 chr2L_14515001 0.46 RAL-584_95b 56 chr2L 14699185 14699302 roo 409 14 25 117 '15-10 59.27 6.9 3.2 intergenic not near genes chr2L_25_14695001 chr2L_14695001 0.60 RAL-584_95b 57 chr2L 14798934 14799043 blood 376 7022 21 109 '13-8 65.84 7.3 2.5 intergenic not near genes chr2L_21_14795001 chr2L_14795001 0.62 RAL-584_95b 58 chr2L 15215517 15215616 roo 410 9 16 99 '10-6 66.33 7.3 1.9 exon CG43230 + chr2L_16_15215001 chr2L_15215001 0.62 RAL-584_95b 59 chr2L 15265066 15265191 roo 8662 412 33 125 '11-22 66.88 10.8 2.8 intergenic Cul3 -,yuri - chr2L_33_15265001 chr2L_15265001 0.33 RAL-584_95b 60 chr2L 15762704 15762779 P-element 2883 33 17 75 '6-11 41.34 7.2 2.1 5` UTR Gli - chr2L_17_15760001 chr2L_15760001 0.35 RAL-584_95b 61 chr2L 15866693 15866787 Idefix 6 7381 13 94 '11-2 64.39 9.6 1.2 intergenic not near genes chr2L_13_15865001 chr2L_15865001 0.85 RAL-584_95b 62 chr2L 15903322 15903363 jockey 4975 4986 20 41 '9-11 58.97 10.7 1.7 intergenic not near genes chr2L_20_15900001 chr2L_15900001 0.45 RAL-584_95b 63 chr2L 16067051 16067161 Burdock 6388 4 36 110 '11-25 66.80 7.6 4.2 intron beat-Ia + chr2L_36_16065001 chr2L_16065001 0.31 RAL-584_95b 64 chr2L 16272486 16272603 1360 1 3387 39 117 '22-17 67.93 12.9 2.8 intron crp - chr2L_39_16270001 chr2L_16270001 0.56 RAL-584_95b 65 chr2L 16369186 16369245 hobo 31 2911 12 59 '11-1 64.30 7.4 1.4 intergenic not near genes chr2L_12_16365001 chr2L_16365001 0.92 RAL-584_95b 66 chr2L 16380927 16380994 roo 9036 8665 18 67 '11-7 69.33 4.4 3.3 intergenic not near genes chr2L_18_16380001 chr2L_16380001 0.61 RAL-584_95b 67 chr2L 16504982 16505074 flea 257 4758 22 92 '6-16 66.89 6.6 2.9 intron Tpr2 + chr2L_22_16500001 chr2L_16500001 0.27 RAL-584_95b 68 chr2L 16554934 16554972 F-element 269 241 9 38 '5-4 55.87 12.8 0.7 intron CG42389 + chr2L_9_16550001 chr2L_16550001 0.56 RAL-584_95b 69 chr2L 17053402 17053526 Stalker2 400 7247 20 124 '16-4 62.08 5.3 3.2 intergenic not near genes chr2L_20_17050001 chr2L_17050001 0.80 RAL-584_95b 70 chr2L 17154030 17154141 micropia 454 9 21 111 '4-17 65.35 5.7 3.1 intron,intron CG34106 +,beat-IIIa + chr2L_21_17150001 chr2L_17150001 0.19 RAL-584_95b 71 chr2L 17183846 17183940 I-element 2 5341 19 94 '14-5 64.83 12.5 1.4 intergenic CG31750 + chr2L_19_17180001 chr2L_17180001 0.74 RAL-584_95b 72 chr2L 17574361 17574450 hopper 1400 14 11 89 '8-3 56.87 4.2 2.1 intergenic mir-287 + chr2L_11_17570001 chr2L_17570001 0.73 RAL-584_95b 73 chr2L 17628280 17628392 flea 246 4757 14 112 '9-5 65.04 8.2 1.5 exon CG43054 + chr2L_14_17625001 chr2L_17625001 0.64 RAL-584_95b 74 chr2L 17769809 17769919 blood 378 12 35 110 '17-18 63.85 9.6 3.3 intron CadN - chr2L_35_17765001 chr2L_17765001 0.49 RAL-584_95b 75 chr2L 17807006 17807108 roo 8677 402 24 102 '11-13 67.57 8.2 2.6 intron CadN2 - chr2L_24_17805001 chr2L_17805001 0.46 RAL-584_95b 76 chr2L 18199753 18199792 Ivk 5336 5376 12 39 '6-6 64.17 5.8 1.8 intron CG42750 - chr2L_12_18195001 chr2L_18195001 0.50 RAL-584_95b 77 chr2L 18275078 18275184 I-element 33 5350 20 106 '11-9 60.74 11.0 1.7 intron CG42750 - chr2L_20_18275001 chr2L_18275001 0.55 RAL-584_95b 78 chr2L 18526667 18526768 Burdock 255 6143 19 101 '15-4 51.91 7.0 2.4 intron CG10211 + chr2L_19_18525001 chr2L_18525001 0.79 RAL-584_95b 79 chr2L 18570468 18570574 FB 9 2 25 106 '10-15 66.15 7.1 3.1 intron Pde11 - chr2L_25_18570001 chr2L_18570001 0.40 RAL-584_95b 80 chr2L 18604314 18604432 297 394 6580 30 118 '16-14 69.29 9.2 2.9 intron CG10413 - chr2L_30_18600001 chr2L_18600001 0.53 RAL-584_95b 81 chr2L 18612208 18612329 Transpac 310 1 36 121 '18-18 65.84 10.2 3.2 5` UTR Atac2 - chr2L_36_18610001 chr2L_18610001 0.50 RAL-584_95b 82 chr2L 19571903 19572012 P-element 1 8 28 109 '14-14 50.23 11.4 2.3 intron spi - chr2L_28_19570001 chr2L_19570001 0.50 RAL-584_95b 83 chr2L 19642287 19642391 Quasimodo 7359 10 19 104 '7-12 65.90 7.8 2.2 intron Lar + chr2L_19_19640001 chr2L_19640001 0.37 RAL-584_95b 84 chr2L 19678097 19678202 flea 253 4759 17 105 '1-16 62.48 5.9 2.5 intron Lar + chr2L_17_19675001 chr2L_19675001 0.06 RAL-584_95b 85 chr2L 19681401 19681504 hopper 10 7 16 103 '6-10 60.56 9.2 1.6 intron Lar + chr2L_16_19680001 chr2L_19680001 0.38 RAL-584_95b 86 chr2L 19817825 19817869 G4 3827 3784 9 44 '7-2 68.57 15.0 0.6 intron sick + chr2L_9_19815001 chr2L_19815001 0.78 RAL-584_95b 87 chr2L 19867610 19867705 roo 16 399 25 95 '8-17 63.97 7.2 3.0 intron sick + chr2L_25_19865001 chr2L_19865001 0.32 RAL-584_95b 88 chr2L 20046213 20046325 roo 8665 401 32 112 '17-15 67.82 12.2 2.4 intron sNPF + chr2L_32_20045001 chr2L_20045001 0.53 RAL-584_95b 89 chr2L 20253572 20253605 roo 8678 7 10 33 '4-6 58.42 7.5 1.2 intergenic CR40465 - chr2L_10_20250001 chr2L_20250001 0.40 RAL-584_95b 90 chr2L 20385061 20385109 jockey 31 7 11 48 '4-7 58.67 8.8 1.1 intergenic CG10947 - chr2L_11_20385001 chr2L_20385001 0.36 RAL-584_95b 91 chr2L 20626370 20626415 Doc 17 5 8 45 '5-3 62.01 12.6 0.6 intergenic CR44909 - chr2L_8_20625001 chr2L_20625001 0.62 RAL-584_95b 92 chr2L 20840398 20840452 Doc 2 34 15 54 '4-11 63.35 15.1 0.9 intergenic CG31676 + chr2L_15_20840001 chr2L_20840001 0.27 RAL-584_95b 93 chr2L 20911559 20911672 roo 8670 407 24 113 '8-16 65.68 11.6 1.9 intron,intron CG43739 -,sky - chr2L_24_20910001 chr2L_20910001 0.33 RAL-584_95b 94 chr2L 20939500 20939601 hopper 4 1414 8 101 '4-4 65.48 7.4 1.0 intergenic not near genes chr2L_8_20935001 chr2L_20935001 0.50 RAL-584_95b 95 chr2L 21050888 21051005 pogo 2096 2 35 117 '12-23 67.41 12.6 2.6 intron CG42238 - chr2L_35_21050001 chr2L_21050001 0.34 RAL-584_95b 96 chr2L 21070459 21070576 Transpac 309 4 35 117 '15-20 66.37 11.9 2.7 intron CG9265 - chr2L_35_21070001 chr2L_21070001 0.43 RAL-584_95b 97 chr2L 21312882 21312991 roo 401 8668 34 109 '22-12 66.26 11.2 2.8 intron crc + chr2L_34_21310001 chr2L_21310001 0.65 RAL-584_95b 98 chr2L 21376430 21376465 roo 9018 402 12 35 '5-7 67.91 15.4 0.7 intron CG8665 + chr2L_12_21375001 chr2L_21375001 0.42 RAL-584_95b 99 chr2L 21403522 21403554 G5 4411 4395 5 32 '1-4 58.66 5.9 0.7 intergenic not near genes chr2L_5_21400001 chr2L_21400001 0.20 RAL-584_95b 100 chr2L 21570233 21570275 Dm88 10 1 14 42 '8-6 63.72 9.4 1.3 intergenic not near genes chr2L_14_21570001 chr2L_21570001 0.57 RAL-584_95b 101 chr2L 21687107 21687156 mariner2 852 891 4 49 '3-1 65.07 8.7 0.4 intron CG31619 + chr2L_4_21685001 chr2L_21685001 0.75 RAL-584_95b 102 chr2L 21739455 21739490 INE-1 549 547 7 35 '4-3 57.30 17.7 0.4 intergenic not near genes chr2L_7_21735001 chr2L_21735001 0.57 RAL-584_95b 103 chr2L 21765001 21765103 Quasimodo 7348 1 13 102 '4-9 68.82 9.3 1.3 intron CG31612 - chr2L_13_21765001 chr2L_21765001 0.31 RAL-584_95b 104 chr2L 22181121 22181161 R1A1-element 5183 5223 7 40 '5-2 67.07 7.2 0.9 intron CG3635 + chr2L_7_22180001 chr2L_22180001 0.71 RAL-584_95b 105 chr2L 22775542 22775584 pogo 2089 2097 7 42 '3-4 64.11 9.4 0.7 intergenic not near genes chr2L_7_22775001 chr2L_22775001 0.43 RAL-584_95b 106 chr2L 23003276 23003386 Quasimodo 7366 9 7 110 '6-1 67.46 7.6 0.8 intron Cht3 - chr2L_7_23000001 chr2L_23000001 0.86 RAL-584_95b 107 chr2L 23313649 23313749 S-element 1711 3 12 100 '10-2 68.76 7.3 1.4 intergenic CG40042 - chr2L_12_23310001 chr2L_23310001 0.83 RAL-584_95b 108 chr2R 491885 491947 P-element 2 39 18 62 '10-8 43.39 10.7 1.5 intergenic not near genes chr2R_18_490001 chr2R_490001 0.56 RAL-584_95b 109 chr2R 959920 959961 mdg1 96 106 15 41 '10-5 73.28 7.1 1.9 intergenic not near genes chr2R_15_955001 chr2R_955001 0.67 RAL-584_95b 110 chr2R 1320668 1320710 diver2 366 4886 14 42 '5-9 56.09 22.5 0.6 intergenic not near genes chr2R_14_1320001 chr2R_1320001 0.36 RAL-584_95b 111 chr2R 1597488 1597574 412 7073 7541 17 86 '8-9 65.56 10.3 1.5 intergenic not near genes chr2R_17_1595001 chr2R_1595001 0.47 RAL-584_95b 112 chr2R 2009384 2009420 I-element 6 15 4 36 '2-2 77.80 3.9 0.8 intron CG17684 - chr2R_4_2005001 chr2R_2005001 0.50 RAL-584_95b 113 chr2R 2143980 2144055 gypsy10 340 3 7 75 '3-4 66.37 7.8 0.8 intron CG17684 - chr2R_7_2140001 chr2R_2140001 0.43 RAL-584_95b 114 chr2R 2262954 2262988 Juan 4203 4194 11 34 '6-5 57.45 8.7 1.1 intergenic not near genes chr2R_11_2260001 chr2R_2260001 0.55 RAL-584_95b 115 chr2R 2830380 2830418 rover 340 7253 9 38 '3-6 68.11 13.1 0.6 intron CG41378 - chr2R_9_2830001 chr2R_2830001 0.33 RAL-584_95b 116 chr2R 2875180 2875207 TLD2_LTR 107 124 5 27 '3-2 61.64 29.3 0.2 intergenic not near genes chr2R_5_2875001 chr2R_2875001 0.60 RAL-584_95b 117 chr2R 2963362 2963462 Juan 4011 4205 18 100 '12-6 63.32 7.0 2.2 intron Scp1 - chr2R_18_2960001 chr2R_2960001 0.67 RAL-584_95b 118 chr2R 3871266 3871296 flea 4769 4758 10 30 '5-5 66.31 8.6 1.0 intergenic not near genes chr2R_10_3870001 chr2R_3870001 0.50 RAL-584_95b 119 chr2R 3877690 3877757 flea 247 4798 9 67 '3-6 67.93 8.0 1.0 intergenic not near genes chr2R_9_3875001 chr2R_3875001 0.33 RAL-584_95b 120 chr2R 4029453 4029560 flea 4756 4999 20 107 '12-8 64.33 10.4 1.8 intron Haspin + chr2R_20_4025001 chr2R_4025001 0.60 RAL-584_95b 121 chr2R 4164860 4164885 roo 5 30 6 25 '4-2 67.94 15.4 0.4 intergenic not near genes chr2R_6_4160001 chr2R_4160001 0.67 RAL-584_95b 122 chr2R 4514899 4514929 transib2 2566 2576 7 30 '4-3 43.63 6.5 0.9 intergenic RpL38 - chr2R_7_4510001 chr2R_4510001 0.57 RAL-584_95b 123 chr2R 4673569 4673596 Quasimodo 7362 7347 6 27 '4-2 67.11 14.1 0.4 3` UTR CG17883 + chr2R_6_4670001 chr2R_4670001 0.67 RAL-584_95b 124 chr2R 4675549 4675600 gypsy5 6937 6948 23 51 '11-12 63.57 32.1 0.7 intergenic not near genes chr2R_23_4675001 chr2R_4675001 0.48 RAL-584_95b 125 chr2R 4900357 4900385 Doc 13 5 8 28 '5-3 52.28 12.7 0.6 intron CG44102 - chr2R_8_4900001 chr2R_4900001 0.62 RAL-584_95b 126 chr2R 5064787 5064835 Stalker3T 201 202 319 48 '1-318 58.52 12.6 23.5 intergenic TpnC41C - chr2R_319_5060001 chr2R_5060001 0.00 RAL-584_95b 127 chr2R 5118829 5118876 pogo 2052 2099 13 47 '11-2 66.03 10.0 1.2 intron gus - chr2R_13_5115001 chr2R_5115001 0.85 RAL-584_95b 128 chr2R 5171947 5171993 pogo 25 6 13 46 '9-4 66.27 5.5 2.0 intergenic not near genes chr2R_13_5170001 chr2R_5170001 0.69 RAL-584_95b 129 chr2R 5214953 5214991 F-element 17 57 9 38 '4-5 54.18 11.8 0.7 intron Nipped-A - chr2R_9_5210001 chr2R_5210001 0.44 RAL-584_95b 130 chr2R 5296627 5296745 Max-element 8235 8533 17 118 '11-6 65.14 7.0 2.1 intergenic not near genes chr2R_17_5295001 chr2R_5295001 0.65 RAL-584_95b 131 chr2R 5302152 5302190 S-element 37 1702 8 38 '2-6 59.87 30.5 0.3 intergenic not near genes chr2R_8_5300001 chr2R_5300001 0.25 RAL-584_95b 132 chr2R 5479594 5479645 roo 8667 8 21 51 '9-12 64.30 13.4 1.5 intron CG30440 - chr2R_21_5475001 chr2R_5475001 0.43 RAL-584_95b 133 chr2R 5674652 5674740 S-element 7 1701 16 88 '7-9 64.80 8.7 1.6 intergenic not near genes chr2R_16_5670001 chr2R_5670001 0.44 RAL-584_95b 134 chr2R 5852022 5852117 mdg1 7 7457 17 95 '5-12 60.95 6.3 2.3 intron dpr12 + chr2R_17_5850001 chr2R_5850001 0.29 RAL-584_95b 135 chr2R 5957054 5957173 297 7 6582 17 119 '10-7 66.43 8.6 1.8 intergenic not near genes chr2R_17_5955001 chr2R_5955001 0.59 RAL-584_95b 136 chr2R 6041534 6041653 flea 4755 5011 27 119 '17-10 68.06 9.4 2.6 intergenic not near genes chr2R_27_6040001 chr2R_6040001 0.63 RAL-584_95b 137 chr2R 6066447 6066532 Transpac 5196 4 25 85 '5-20 65.94 9.7 2.3 intron CCHa2-R + chr2R_25_6065001 chr2R_6065001 0.20 RAL-584_95b 138 chr2R 6565019 6565116 blood 7030 379 22 97 '14-8 64.23 7.6 2.6 intron jing + chr2R_22_6565001 chr2R_6565001 0.64 RAL-584_95b 139 chr2R 6779748 6779849 17.6 7416 6945 31 101 '24-7 67.14 12.0 2.4 intron,3` UTR Epac -,Cyp6a2 - chr2R_31_6775001 chr2R_6775001 0.77 RAL-584_95b 140 chr2R 7048703 7048801 297 6969 2 22 98 '12-10 66.36 11.3 1.8 intergenic Tsp42El + chr2R_22_7045001 chr2R_7045001 0.55 RAL-584_95b 141 chr2R 7142897 7142978 X-element 26 4711 23 81 '13-10 60.04 10.8 1.9 intergenic not near genes chr2R_23_7140001 chr2R_7140001 0.57 RAL-584_95b 142 chr2R 7188668 7188765 I-element 5346 5 19 97 '4-15 61.10 6.8 2.4 intron pk + chr2R_19_7185001 chr2R_7185001 0.21 RAL-584_95b 143 chr2R 7254345 7254470 flea 5012 10 22 125 '18-4 67.23 7.3 2.7 intergenic CR45280 + chr2R_22_7250001 chr2R_7250001 0.82 RAL-584_95b 144 chr2R 7727113 7727164 BS 4656 4709 7 51 '4-3 71.82 4.9 1.2 intron CG18812 - chr2R_7_7725001 chr2R_7725001 0.57 RAL-584_95b 145 chr2R 7736439 7736538 hopper 1411 1397 25 99 '14-11 62.08 9.0 2.5 intergenic not near genes chr2R_25_7735001 chr2R_7735001 0.56 RAL-584_95b 146 chr2R 7898303 7898412 roo 404 7 25 109 '14-11 66.10 11.5 2.0 intron CG30377 + chr2R_25_7895001 chr2R_7895001 0.56 RAL-584_95b 147 chr2R 8086858 8086956 1360 3380 12 23 98 '12-11 68.07 8.0 2.6 3` UTR sut1 + chr2R_23_8085001 chr2R_8085001 0.52 RAL-584_95b 148 chr2R 8204803 8204909 297 380 2 21 106 '9-12 66.01 10.0 1.9 intron LRP1 + chr2R_21_8200001 chr2R_8200001 0.43 RAL-584_95b 149 chr2R 8255919 8255958 Stalker 13 27 9 39 '5-4 58.87 16.2 0.5 intron CG14760 + chr2R_9_8255001 chr2R_8255001 0.56 RAL-584_95b 150 chr2R 8255920 8256001 Stalker4 6955 386 24 81 '11-13 55.26 13.7 1.6 intron CG14760 + chr2R_24_8255001 chr2R_8255001 0.46 RAL-584_95b 151 chr2R 8490544 8490588 Rt1b 5128 5084 11 44 '5-6 59.94 8.8 1.1 intron mtt - chr2R_11_8490001 chr2R_8490001 0.45 RAL-584_95b 152 chr2R 8549459 8549515 Doc 14 1 22 56 '18-4 65.17 14.2 1.4 intergenic not near genes chr2R_22_8545001 chr2R_8545001 0.82 RAL-584_95b 153 chr2R 8590088 8590140 Juan 4060 4023 18 52 '16-2 61.70 9.1 1.8 intergenic CG14752 + chr2R_18_8590001 chr2R_8590001 0.89 RAL-584_95b 154 chr2R 8688108 8688145 Doc 19 18 11 37 '6-5 59.86 10.4 1.0 intergenic not near genes chr2R_11_8685001 chr2R_8685001 0.55 RAL-584_95b 155 chr2R 9306451 9306567 pogo 2096 3 36 116 '20-16 65.37 5.7 5.4 intron Myd88 - chr2R_36_9305001 chr2R_9305001 0.56 RAL-584_95b 156 chr2R 9307187 9307298 pogo 2097 9 21 111 '9-12 65.28 12.1 1.6 intron Myd88 - chr2R_21_9305001 chr2R_9305001 0.43 RAL-584_95b 157 chr2R 9629353 9629470 roo 409 3 28 117 '12-16 64.28 11.7 2.2 intron Mmp2 - chr2R_28_9625001 chr2R_9625001 0.43 RAL-584_95b 158 chr2R 9790011 9790116 Transpac 4919 310 30 105 '13-17 64.74 7.6 3.5 intron,5` UTR CG1688 -,CR44208 + chr2R_30_9790001 chr2R_9790001 0.43 RAL-584_95b 159 chr2R 9867311 9867425 roo 408 7 39 114 '23-16 65.16 12.2 3.0 intron cbx - chr2R_39_9865001 chr2R_9865001 0.59 RAL-584_95b 160 chr2R 9950091 9950128 S-element 1713 7 11 37 '6-5 64.24 10.4 1.0 intron Mef2 - chr2R_11_9950001 chr2R_9950001 0.55 RAL-584_95b 161 chr2R 10028705 10028752 HeT-A 28 28 9 47 '3-6 52.80 19.3 0.4 3` UTR,3` UTR CG12128 +,CG1407 - chr2R_9_10025001 chr2R_10025001 0.33 RAL-584_95b 162 chr2R 10187431 10187706 blood 382 381 38 275 '8-30 61.46 2.9 9.7 intron KCNQ - chr2R_38_10185001 chr2R_10185001 0.21 RAL-584_95b 163 chr2R 10217188 10217235 Ivk 5337 5379 12 47 '6-6 62.66 8.7 1.2 intron,intron CG12912 -,Hr46 - chr2R_12_10215001 chr2R_10215001 0.50 RAL-584_95b 164 chr2R 10555987 10556101 S-element 2 1707 24 114 '8-16 68.28 6.5 3.2 intergenic not near genes chr2R_24_10555001 chr2R_10555001 0.33 RAL-584_95b 165 chr2R 10947079 10947163 pogo 8 2090 18 84 '16-2 62.38 10.1 1.6 5` UTR CR45228 + chr2R_18_10945001 chr2R_10945001 0.89 RAL-584_95b 166 chr2R 11161284 11161389 412 3 490 31 105 '17-14 63.07 6.7 4.0 intron,intron CG13229 -,shn + chr2R_31_11160001 chr2R_11160001 0.55 RAL-584_95b 167 chr2R 11275533 11275609 hopper 1392 22 7 76 '4-3 55.70 11.5 0.6 intergenic TpnC47D - chr2R_7_11275001 chr2R_11275001 0.57 RAL-584_95b 168 chr2R 11341668 11341776 pogo 12 2097 27 108 '15-12 66.21 10.9 2.3 intergenic thetaTry -,etaTry - chr2R_27_11340001 chr2R_11340001 0.56 RAL-584_95b 169 chr2R 11496096 11496196 roo 400 12 6 100 '4-2 61.84 9.9 0.6 intron inv + chr2R_6_11495001 chr2R_11495001 0.67 RAL-584_95b 170 chr2R 11657592 11657696 S-element 1699 1713 25 104 '9-16 64.65 4.3 4.7 intron Roc2 - chr2R_25_11655001 chr2R_11655001 0.36 RAL-584_95b 171 chr2R 12185308 12185425 accord 7382 3 27 117 '8-19 63.28 19.5 1.3 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_27_12185001 chr2R_12185001 0.30 RAL-584_95b 172 chr2R 12336604 12336672 pogo 2084 4 13 68 '8-5 73.09 9.4 1.2 intergenic CG34021 +,CG8490 + chr2R_13_12335001 chr2R_12335001 0.62 RAL-584_95b 173 chr2R 12369651 12369697 I-element 5347 5328 14 46 '4-10 62.98 13.2 1.0 exon CG33012 + chr2R_14_12365001 chr2R_12365001 0.29 RAL-584_95b 174 chr2R 12534520 12534607 FB 11 16 14 87 '10-4 63.93 9.0 1.4 intron fra + chr2R_14_12530001 chr2R_12530001 0.71 RAL-584_95b 175 chr2R 12635770 12635867 P-element 11 4 22 97 '8-14 44.86 12.8 1.6 5` UTR,3` UTR CG33671 -,CG33672 - chr2R_22_12635001 chr2R_12635001 0.36 RAL-584_95b 176 chr2R 12818704 12818787 mdg1 7060 7445 15 83 '10-5 57.43 6.3 2.1 intergenic not near genes chr2R_15_12815001 chr2R_12815001 0.67 RAL-584_95b 177 chr2R 13078717 13078755 jockey 4676 4690 9 38 '2-7 59.79 18.1 0.5 intron Drl-2 - chr2R_9_13075001 chr2R_13075001 0.22 RAL-584_95b 178 chr2R 13121789 13121914 P-element 2638 2639 5 125 '3-2 76.07 5.8 0.7 intron CG13325 + chr2R_5_13120001 chr2R_13120001 0.60 RAL-584_95b 179 chr2R 13217439 13217557 roo 9071 9063 13 118 '5-8 69.18 9.8 1.2 exon CG4630 - chr2R_13_13215001 chr2R_13215001 0.38 RAL-584_95b 180 chr2R 13279665 13279763 mdg1 7045 405 29 98 '9-20 63.78 8.3 3.1 intron Dh31-R - chr2R_29_13275001 chr2R_13275001 0.31 RAL-584_95b 181 chr2R 13368549 13368647 hobo 2931 12 18 98 '9-9 65.96 7.1 2.2 intergenic not near genes chr2R_18_13365001 chr2R_13365001 0.50 RAL-584_95b 182 chr2R 13599461 13599568 1360 2 10 31 107 '18-13 66.06 7.0 3.9 intergenic not near genes chr2R_31_13595001 chr2R_13595001 0.58 RAL-584_95b 183 chr2R 13664097 13664208 hopper 7 3 22 111 '15-7 61.54 8.4 2.3 intron fas + chr2R_22_13660001 chr2R_13660001 0.68 RAL-584_95b 184 chr2R 13741953 13741978 flea 240 4992 7 25 '5-2 69.11 9.1 0.7 intron fas + chr2R_7_13740001 chr2R_13740001 0.71 RAL-584_95b 185 chr2R 13741975 13742064 X-element 4708 9 24 89 '9-15 58.13 6.4 3.2 intron fas + chr2R_24_13740001 chr2R_13740001 0.38 RAL-584_95b 186 chr2R 13839936 13840054 opus 112 7496 23 118 '11-12 68.41 7.1 2.8 intergenic CG6357 + chr2R_23_13835001 chr2R_13835001 0.48 RAL-584_95b 187 chr2R 13995624 13995722 pogo 2098 3 23 98 '14-9 66.57 10.0 2.1 intron mam + chr2R_23_13995001 chr2R_13995001 0.61 RAL-584_95b 188 chr2R 14531922 14532038 Transpac 4918 304 12 116 '9-3 58.54 8.3 1.3 intron ttv + chr2R_12_14530001 chr2R_14530001 0.75 RAL-584_95b 189 chr2R 14632081 14632188 roo 408 8662 23 107 '16-7 66.46 7.2 2.8 intergenic not near genes chr2R_23_14630001 chr2R_14630001 0.70 RAL-584_95b 190 chr2R 14883958 14884076 mdg3 5495 5252 47 118 '23-24 63.13 13.2 3.3 3` UTR Cyp6a20 + chr2R_47_14880001 chr2R_14880001 0.49 RAL-584_95b 191 chr2R 14885112 14885160 BS 4991 5042 8 48 '2-6 60.13 12.6 0.6 intergenic Cyp6a21 - chr2R_8_14885001 chr2R_14885001 0.25 RAL-584_95b 192 chr2R 15287105 15287139 F-element 17 22 10 34 '7-3 58.31 11.3 0.8 intron Trpm - chr2R_10_15285001 chr2R_15285001 0.70 RAL-584_95b 193 chr2R 15374749 15374793 1360 3382 409 5 44 '3-2 55.65 6.2 0.7 intergenic not near genes chr2R_5_15370001 chr2R_15370001 0.60 RAL-584_95b 194 chr2R 15459333 15459371 roo 401 9026 8 38 '4-4 69.06 8.7 0.8 intron CG43729 + chr2R_8_15455001 chr2R_15455001 0.50 RAL-584_95b 195 chr2R 15720281 15720366 hopper 35 1414 17 85 '5-12 64.19 6.7 2.2 intergenic not near genes chr2R_17_15720001 chr2R_15720001 0.29 RAL-584_95b 196 chr2R 15880505 15880636 opus 498 110 14 131 '7-7 59.56 9.0 1.4 intron sli - chr2R_14_15880001 chr2R_15880001 0.50 RAL-584_95b 197 chr2R 16033786 16033888 Transpac 4922 5212 27 102 '14-13 65.42 12.2 2.0 intron SP2353 + chr2R_27_16030001 chr2R_16030001 0.52 RAL-584_95b 198 chr2R 16068113 16068147 297 7 6587 8 34 '4-4 66.67 18.3 0.4 intergenic not near genes chr2R_8_16065001 chr2R_16065001 0.50 RAL-584_95b 199 chr2R 16162019 16162074 1360 3355 3379 19 55 '12-7 67.68 6.8 2.4 intron lbk + chr2R_19_16160001 chr2R_16160001 0.63 RAL-584_95b 200 chr2R 16230135 16230249 P-element 2884 2886 34 114 '17-17 55.56 12.5 2.5 5` UTR CG15706 - chr2R_34_16230001 chr2R_16230001 0.50 RAL-584_95b 201 chr2R 16858573 16858675 pogo 1 2095 25 102 '10-15 67.63 8.4 2.7 exon Dek + chr2R_25_16855001 chr2R_16855001 0.40 RAL-584_95b 202 chr2R 17264312 17264425 3S18 6097 5764 24 113 '13-11 61.93 10.5 2.1 intron mbl + chr2R_24_17260001 chr2R_17260001 0.54 RAL-584_95b 203 chr2R 17394497 17394606 P-element 8 2886 23 109 '7-16 53.15 12.4 1.7 intergenic Sip1 + chr2R_23_17390001 chr2R_17390001 0.30 RAL-584_95b 204 chr2R 17584336 17584424 P-element 14 2871 22 88 '5-17 45.15 11.1 1.8 5` UTR CR45274 + chr2R_22_17580001 chr2R_17580001 0.23 RAL-584_95b 205 chr2R 17812577 17812691 roo 406 8667 26 114 '15-11 66.72 9.8 2.4 intron grh + chr2R_26_17810001 chr2R_17810001 0.58 RAL-584_95b 206 chr2R 17986261 17986361 297 6958 6586 17 100 '9-8 65.85 9.7 1.6 intron dpr13 - chr2R_17_17985001 chr2R_17985001 0.53 RAL-584_95b 207 chr2R 18337527 18337581 gypsy7 5004 5003 5 54 '1-4 74.47 10.1 0.5 intron sbb - chr2R_5_18335001 chr2R_18335001 0.20 RAL-584_95b 208 chr2R 18372595 18372685 jockey 4686 4985 29 90 '11-18 61.32 4.5 5.3 intergenic not near genes chr2R_29_18370001 chr2R_18370001 0.38 RAL-584_95b 209 chr2R 18807871 18807903 BS 5074 5075 8 32 '4-4 62.00 7.3 1.0 intergenic CG15096 - chr2R_8_18805001 chr2R_18805001 0.50 RAL-584_95b 210 chr2R 19031408 19031451 mdg1 7045 13 13 43 '5-8 60.55 6.6 1.7 intron 5-HT1B - chr2R_13_19030001 chr2R_19030001 0.38 RAL-584_95b 211 chr2R 19075338 19075413 Ivk 14 5375 20 75 '9-11 63.27 8.9 2.0 intron 5-HT1A + chr2R_20_19075001 chr2R_19075001 0.45 RAL-584_95b 212 chr2R 19103400 19103520 opus 495 112 17 120 '12-5 67.67 11.0 1.4 intron 5-HT1A + chr2R_17_19100001 chr2R_19100001 0.71 RAL-584_95b 213 chr2R 19108441 19108468 hobo 1 34 8 27 '4-4 62.10 14.4 0.5 intron 5-HT1A + chr2R_8_19105001 chr2R_19105001 0.50 RAL-584_95b 214 chr2R 19183945 19184053 copia 4871 245 27 108 '16-11 65.65 9.6 2.5 intron hppy + chr2R_27_19180001 chr2R_19180001 0.59 RAL-584_95b 215 chr2R 19446738 19446836 HMS-Beagle 238 16 11 98 '7-4 61.27 11.9 0.9 intergenic EloC - chr2R_11_19445001 chr2R_19445001 0.64 RAL-584_95b 216 chr2R 19654974 19655092 hobo 2708 2 18 118 '2-16 59.85 5.1 3.0 intergenic not near genes chr2R_18_19650001 chr2R_19650001 0.11 RAL-584_95b 217 chr2R 19904010 19904049 Doc 4416 4455 10 39 '3-7 57.32 12.0 0.8 intergenic not near genes chr2R_10_19900001 chr2R_19900001 0.30 RAL-584_95b 218 chr2R 19943230 19943308 I-element 3 5345 17 78 '11-6 66.06 13.9 1.1 intergenic not near genes chr2R_17_19940001 chr2R_19940001 0.65 RAL-584_95b 219 chr2R 20449601 20449647 jockey 12 18 12 46 '6-6 59.20 13.8 0.8 intron CG12484 + chr2R_12_20445001 chr2R_20445001 0.50 RAL-584_95b 220 chr2R 20487516 20487634 mdg3 5254 5497 24 118 '18-6 65.84 9.3 2.3 intergenic not near genes chr2R_24_20485001 chr2R_20485001 0.75 RAL-584_95b 221 chr2R 20801078 20801185 412 7537 5 28 107 '14-14 62.37 10.1 2.5 intergenic not near genes chr2R_28_20800001 chr2R_20800001 0.50 RAL-584_95b 222 chr2R 20862755 20862875 copia 255 4869 28 120 '14-14 67.14 7.2 3.4 intergenic not near genes chr2R_28_20860001 chr2R_20860001 0.50 RAL-584_95b 223 chr2R 21362735 21362856 Tirant 8112 8111 15 121 '6-9 68.35 5.5 2.3 intron cv-2 - chr2R_15_21360001 chr2R_21360001 0.40 RAL-584_95b 224 chr2R 21572115 21572220 hopper 11 1410 14 105 '8-6 58.09 6.8 1.8 intron CG10440 - chr2R_14_21570001 chr2R_21570001 0.57 RAL-584_95b 225 chr2R 21958245 21958353 hobo 2937 7 19 108 '8-11 62.95 8.3 2.0 intergenic not near genes chr2R_19_21955001 chr2R_21955001 0.42 RAL-584_95b 226 chr2R 23202924 23202994 Ivk 5333 5349 12 70 '3-9 64.13 8.0 1.3 intron CG34371 - chr2R_12_23200001 chr2R_23200001 0.25 RAL-584_95b 227 chr2R 23366693 23366790 hobo 8 2926 20 97 '13-7 64.61 10.6 1.7 intergenic Ice1 +,vir - chr2R_20_23365001 chr2R_23365001 0.65 RAL-584_95b 228 chr2R 23580634 23580888 P-element 1 2886 31 254 '13-18 52.83 5.3 4.9 intron apt + chr2R_31_23580001 chr2R_23580001 0.42 RAL-584_95b 229 chr2R 23656838 23656883 hopper 1408 7 20 45 '13-7 60.50 6.4 2.7 intergenic not near genes chr2R_20_23655001 chr2R_23655001 0.65 RAL-584_95b 230 chr2R 24021551 24021652 pogo 8 2086 20 101 '7-13 68.15 10.1 1.8 intron CG3907 - chr2R_20_24020001 chr2R_24020001 0.35 RAL-584_95b 231 chr2R 25248717 25248919 roo 8714 8663 35 202 '5-30 68.19 11.7 2.8 intron CG9380 - chr2R_35_25245001 chr2R_25245001 0.14 RAL-584_95b 232 chr3L 342230 342354 Burdock 256 6135 30 124 '20-10 67.67 10.5 2.6 intron,intron Ptpmeg +,mthl10 - chr3L_30_340001 chr3L_340001 0.67 RAL-584_95b 233 chr3L 483200 483314 pogo 3 2089 23 114 '15-8 66.18 8.0 2.6 intron klar - chr3L_23_480001 chr3L_480001 0.65 RAL-584_95b 234 chr3L 600642 600750 pogo 2099 13 23 108 '12-11 63.24 7.8 2.6 exon CG13893 - chr3L_23_600001 chr3L_600001 0.52 RAL-584_95b 235 chr3L 790660 790766 roo 8679 409 21 106 '8-13 60.94 10.3 1.9 intergenic not near genes chr3L_21_790001 chr3L_790001 0.38 RAL-584_95b 236 chr3L 921248 921278 jockey 4670 4665 15 30 '9-6 61.78 13.6 1.0 intron Glut1 + chr3L_15_920001 chr3L_920001 0.60 RAL-584_95b 237 chr3L 922261 922317 roo 8693 8663 14 56 '9-5 67.17 7.5 1.6 intron Glut1 + chr3L_14_920001 chr3L_920001 0.64 RAL-584_95b 238 chr3L 1069657 1069732 412 7068 487 8 75 '4-4 62.22 3.1 2.0 intron bab1 - chr3L_8_1065001 chr3L_1065001 0.50 RAL-584_95b 239 chr3L 1323664 1323748 roo 407 8699 33 84 '22-11 70.43 10.1 3.0 intron,intron Myo61F +,CR45166 - chr3L_33_1320001 chr3L_1320001 0.67 RAL-584_95b 240 chr3L 1587687 1587802 roo 6 409 39 115 '16-23 64.17 10.7 3.3 intron CG13917 + chr3L_39_1585001 chr3L_1585001 0.41 RAL-584_95b 241 chr3L 1741575 1741690 hobo 5 2708 12 115 '6-6 64.18 6.5 1.6 intron Gk + chr3L_12_1740001 chr3L_1740001 0.50 RAL-584_95b 242 chr3L 1986447 1986555 412 484 4 23 108 '12-11 65.37 6.2 3.2 intergenic not near genes chr3L_23_1985001 chr3L_1985001 0.52 RAL-584_95b 243 chr3L 2033760 2033835 297 4 6961 8 75 '3-5 68.24 4.7 1.4 intergenic not near genes chr3L_8_2030001 chr3L_2030001 0.38 RAL-584_95b 244 chr3L 2150273 2150389 pogo 2100 7 25 116 '16-9 69.81 8.9 2.5 5` UTR zormin - chr3L_25_2150001 chr3L_2150001 0.64 RAL-584_95b 245 chr3L 2376394 2376488 mdg1 43 32 4 94 '1-3 68.00 6.7 0.5 exon CG9004 + chr3L_4_2375001 chr3L_2375001 0.25 RAL-584_95b 246 chr3L 2867964 2868002 hobo 2932 2925 6 38 '2-4 63.29 9.3 0.6 intron CG43444 - chr3L_6_2865001 chr3L_2865001 0.33 RAL-584_95b 247 chr3L 3034250 3034357 roo 397 1 30 107 '9-21 65.43 11.5 2.4 intergenic not near genes chr3L_30_3030001 chr3L_3030001 0.30 RAL-584_95b 248 chr3L 3423885 3423919 Doc2-element 229 247 7 34 '4-3 77.78 1.0 3.5 intron sty - chr3L_7_3420001 chr3L_3420001 0.57 RAL-584_95b 249 chr3L 3968272 3968382 412 5 7540 25 110 '13-12 62.31 9.3 2.4 intergenic not near genes chr3L_25_3965001 chr3L_3965001 0.52 RAL-584_95b 250 chr3L 4032036 4032153 roo 8669 409 31 117 '14-17 62.59 11.0 2.6 intergenic Gr64b +,Gr64c +,Gr64d +,Gr64e + chr3L_31_4030001 chr3L_4030001 0.45 RAL-584_95b 251 chr3L 4671633 4671669 jockey 4774 4765 10 36 '6-4 66.69 9.0 1.0 intron axo - chr3L_10_4670001 chr3L_4670001 0.60 RAL-584_95b 252 chr3L 4755289 4755333 jockey 10 16 8 44 '5-3 61.66 12.8 0.6 intron RhoGEF64C + chr3L_8_4755001 chr3L_4755001 0.62 RAL-584_95b 253 chr3L 5079669 5079767 mdg3 5484 5261 21 98 '7-14 62.47 6.0 3.0 intergenic not near genes chr3L_21_5075001 chr3L_5075001 0.33 RAL-584_95b 254 chr3L 5098140 5098250 blood 7385 7018 23 110 '14-9 63.07 8.7 2.4 intergenic CR34047 - chr3L_23_5095001 chr3L_5095001 0.61 RAL-584_95b 255 chr3L 5102269 5102384 roo 8666 405 28 115 '14-14 69.53 8.7 2.9 intergenic not near genes chr3L_28_5100001 chr3L_5100001 0.50 RAL-584_95b 256 chr3L 5351199 5351299 roo 411 8667 21 100 '7-14 63.64 11.3 1.7 intron lama - chr3L_21_5350001 chr3L_5350001 0.33 RAL-584_95b 257 chr3L 5409596 5409700 Transpac 4918 5215 17 104 '7-10 61.28 0.4 12.1 intergenic not near genes chr3L_17_5405001 chr3L_5405001 0.41 RAL-584_95b 258 chr3L 5438724 5438821 hopper 2 5 21 97 '14-7 65.00 7.3 2.5 intron CG34391 + chr3L_21_5435001 chr3L_5435001 0.67 RAL-584_95b 259 chr3L 5452364 5452486 copia 257 4869 34 122 '16-18 63.98 10.0 3.1 intergenic not near genes chr3L_34_5450001 chr3L_5450001 0.47 RAL-584_95b 260 chr3L 5691085 5691194 P-element 3 2881 34 109 '16-18 46.75 9.2 3.3 intron sif + chr3L_34_5690001 chr3L_5690001 0.47 RAL-584_95b 261 chr3L 5918964 5919017 jockey 23 4953 15 53 '5-10 63.27 3.8 3.1 intron,5` UTR CG10483 -,CR45167 + chr3L_15_5915001 chr3L_5915001 0.33 RAL-584_95b 262 chr3L 6020610 6020718 412 479 3 26 108 '6-20 66.94 7.0 3.2 intron PVRAP + chr3L_26_6020001 chr3L_6020001 0.23 RAL-584_95b 263 chr3L 6042784 6042831 Doc 16 5 21 47 '15-6 66.80 9.0 2.1 intergenic not near genes chr3L_21_6040001 chr3L_6040001 0.71 RAL-584_95b 264 chr3L 6658498 6658547 jockey 4781 4759 13 49 '9-4 64.16 9.2 1.3 intergenic not near genes chr3L_13_6655001 chr3L_6655001 0.69 RAL-584_95b 265 chr3L 6975068 6975177 1360 6 6 32 109 '12-20 67.31 9.4 3.1 intron Galphai - chr3L_32_6975001 chr3L_6975001 0.38 RAL-584_95b 266 chr3L 7031394 7031507 roo 403 3 25 113 '14-11 70.72 8.0 2.8 intron Mp + chr3L_25_7030001 chr3L_7030001 0.56 RAL-584_95b 267 chr3L 7428307 7428427 copia 4872 257 27 120 '15-12 65.45 5.6 4.1 intron CG42458 + chr3L_27_7425001 chr3L_7425001 0.56 RAL-584_95b 268 chr3L 8108437 8108473 3S18 330 6080 5 36 '2-3 63.43 10.9 0.4 intron Ect4 + chr3L_5_8105001 chr3L_8105001 0.40 RAL-584_95b 269 chr3L 8735629 8735744 roo 8669 408 21 115 '11-10 68.56 30.6 0.7 intron Prm - chr3L_21_8735001 chr3L_8735001 0.52 RAL-584_95b 270 chr3L 8815375 8815523 1360 1 2 30 148 '8-22 62.69 5.8 4.4 intergenic not near genes chr3L_30_8815001 chr3L_8815001 0.27 RAL-584_95b 271 chr3L 9117495 9117584 mdg1 15 406 21 89 '7-14 68.03 8.7 2.2 intron bol - chr3L_21_9115001 chr3L_9115001 0.33 RAL-584_95b 272 chr3L 9442909 9442935 TAHRE 10093 10078 6 26 '2-4 66.61 15.9 0.4 intergenic CG33926 + chr3L_6_9440001 chr3L_9440001 0.33 RAL-584_95b 273 chr3L 9858233 9858337 pogo 1 2082 9 104 '5-4 65.09 10.6 0.8 intron CG10809 - chr3L_9_9855001 chr3L_9855001 0.56 RAL-584_95b 274 chr3L 10125424 10125495 jockey 10 4966 12 71 '6-6 61.71 12.1 0.9 intron dpr6 + chr3L_12_10125001 chr3L_10125001 0.50 RAL-584_95b 275 chr3L 10138133 10138260 Tirant 8107 403 14 127 '4-10 70.52 8.7 1.4 intron dpr6 + chr3L_14_10135001 chr3L_10135001 0.29 RAL-584_95b 276 chr3L 10551477 10551581 pogo 2099 4 16 104 '5-11 64.91 6.0 2.3 intron A2bp1 + chr3L_16_10550001 chr3L_10550001 0.31 RAL-584_95b 277 chr3L 10644766 10644866 jockey 4674 4985 28 100 '17-11 61.53 8.8 2.9 intron CG32066 - chr3L_28_10640001 chr3L_10640001 0.61 RAL-584_95b 278 chr3L 10865653 10865688 jockey 4703 4690 12 35 '5-7 60.76 9.8 1.1 intron tna + chr3L_12_10865001 chr3L_10865001 0.42 RAL-584_95b 279 chr3L 10897822 10897934 S-element 1711 1709 24 112 '15-9 67.31 11.1 2.0 intron Aps - chr3L_24_10895001 chr3L_10895001 0.62 RAL-584_95b 280 chr3L 10923058 10923145 Burdock 237 17 22 87 '12-10 62.19 6.9 2.8 intergenic not near genes chr3L_22_10920001 chr3L_10920001 0.55 RAL-584_95b 281 chr3L 11303136 11303266 17.6 7413 2 23 130 '13-10 65.21 2.1 7.4 intergenic not near genes chr3L_23_11300001 chr3L_11300001 0.57 RAL-584_95b 282 chr3L 11336197 11336311 1360 3386 2 19 114 '7-12 66.48 7.9 2.1 intergenic not near genes chr3L_19_11335001 chr3L_11335001 0.37 RAL-584_95b 283 chr3L 11813630 11813724 gypsy 6 453 36 94 '13-23 66.47 6.7 4.7 intron CG42255 - chr3L_36_11810001 chr3L_11810001 0.36 RAL-584_95b 284 chr3L 12127547 12127654 diver 217 5894 19 107 '4-15 57.15 6.3 2.6 intergenic Ir68b -,CG34241 + chr3L_19_12125001 chr3L_12125001 0.21 RAL-584_95b 285 chr3L 12410213 12410337 opus 7115 499 23 124 '11-12 68.75 8.7 2.4 intron CG32103 - chr3L_23_12410001 chr3L_12410001 0.48 RAL-584_95b 286 chr3L 12878043 12878141 412 461 1 10 98 '4-6 66.33 8.5 1.1 intergenic not near genes chr3L_10_12875001 chr3L_12875001 0.40 RAL-584_95b 287 chr3L 12882016 12882111 Stalker4 391 7 15 95 '6-9 61.06 9.2 1.5 intergenic not near genes chr3L_15_12880001 chr3L_12880001 0.40 RAL-584_95b 288 chr3L 12882031 12882110 Stalker 7225 6847 11 79 '2-9 64.96 9.9 1.0 intergenic not near genes chr3L_11_12880001 chr3L_12880001 0.18 RAL-584_95b 289 chr3L 12972333 12972440 roo 8664 400 29 107 '16-13 64.85 8.8 3.0 5` UTR CG10748 - chr3L_29_12970001 chr3L_12970001 0.55 RAL-584_95b 290 chr3L 13188330 13188490 transib4 2611 2611 4 160 '3-1 57.44 1.7 1.5 intergenic not near genes chr3L_4_13185001 chr3L_13185001 0.75 RAL-584_95b 291 chr3L 13557154 13557196 jockey 10 12 7 42 '4-3 60.12 3.8 1.5 intron bru-3 - chr3L_7_13555001 chr3L_13555001 0.57 RAL-584_95b 292 chr3L 13688551 13688597 hobo 7 28 18 46 '3-15 64.62 9.9 1.7 intron bru-3 - chr3L_18_13685001 chr3L_13685001 0.17 RAL-584_95b 293 chr3L 13714307 13714418 flea 4760 5008 24 111 '15-9 66.09 6.8 3.1 intron bru-3 - chr3L_24_13710001 chr3L_13710001 0.62 RAL-584_95b 294 chr3L 13795355 13795450 I-element 3 5341 24 95 '15-9 64.29 10.1 2.2 intron bru-3 - chr3L_24_13795001 chr3L_13795001 0.62 RAL-584_95b 295 chr3L 13938387 13938496 412 492 10 29 109 '21-8 60.48 9.8 2.7 intergenic not near genes chr3L_29_13935001 chr3L_13935001 0.72 RAL-584_95b 296 chr3L 13993486 13993593 P-element 8 3 17 107 '15-2 52.73 8.9 1.7 intergenic CG17364 - chr3L_17_13990001 chr3L_13990001 0.88 RAL-584_95b 297 chr3L 14547590 14547707 copia 257 4868 29 117 '11-18 64.44 6.8 3.7 intron CG9238 - chr3L_29_14545001 chr3L_14545001 0.38 RAL-584_95b 298 chr3L 14887817 14887855 jockey 4983 4948 8 38 '2-6 61.58 9.3 0.8 intergenic not near genes chr3L_8_14885001 chr3L_14885001 0.25 RAL-584_95b 299 chr3L 14917126 14917230 412 7532 3 23 104 '11-12 62.99 8.4 2.4 intron DCX-EMAP + chr3L_23_14915001 chr3L_14915001 0.48 RAL-584_95b 300 chr3L 15051630 15051682 Doc 4 11 13 52 '1-12 63.27 8.1 1.4 intron Sytbeta - chr3L_13_15050001 chr3L_15050001 0.08 RAL-584_95b 301 chr3L 15056281 15056320 BS 4990 4992 12 39 '5-7 70.62 3.1 2.9 intron Sytbeta - chr3L_12_15055001 chr3L_15055001 0.42 RAL-584_95b 302 chr3L 15386244 15386359 roo 409 6 26 115 '10-16 65.75 8.9 2.6 intergenic not near genes chr3L_26_15385001 chr3L_15385001 0.38 RAL-584_95b 303 chr3L 15421961 15422038 opus 7022 476 7 77 '1-6 60.49 6.1 1.0 intergenic not near genes chr3L_7_15420001 chr3L_15420001 0.14 RAL-584_95b 304 chr3L 15635626 15635737 412 2 485 37 111 '23-14 63.43 9.4 3.6 intron comm3 - chr3L_37_15635001 chr3L_15635001 0.62 RAL-584_95b 305 chr3L 15642153 15642197 jockey 10 18 5 44 '2-3 65.03 6.2 0.7 intron comm3 - chr3L_5_15640001 chr3L_15640001 0.40 RAL-584_95b 306 chr3L 16013337 16013367 I-element 5343 5313 12 30 '8-4 56.40 10.0 1.1 intergenic not near genes chr3L_12_16010001 chr3L_16010001 0.67 RAL-584_95b 307 chr3L 16013394 16013439 pogo 47 2 13 45 '9-4 68.89 10.3 1.2 intergenic not near genes chr3L_13_16010001 chr3L_16010001 0.69 RAL-584_95b 308 chr3L 16146729 16146771 Juan 3 35 17 42 '7-10 66.97 17.0 0.9 intron CG5151 - chr3L_17_16145001 chr3L_16145001 0.41 RAL-584_95b 309 chr3L 16364015 16364133 Bari1 1701 1 28 118 '10-18 65.62 9.2 2.7 intergenic Cpr72Ea + chr3L_28_16360001 chr3L_16360001 0.36 RAL-584_95b 310 chr3L 16546702 16546727 F-element 14 39 7 25 '2-5 48.83 17.0 0.4 intergenic not near genes chr3L_7_16545001 chr3L_16545001 0.29 RAL-584_95b 311 chr3L 16821090 16821185 297 11 378 15 95 '6-9 66.93 10.8 1.3 intron CG13024 - chr3L_15_16820001 chr3L_16820001 0.40 RAL-584_95b 312 chr3L 16873871 16873981 412 7537 2 45 110 '27-18 62.50 11.3 3.7 intron Lmpt + chr3L_45_16870001 chr3L_16870001 0.60 RAL-584_95b 313 chr3L 16971647 16971680 R1A1-element 5315 5334 12 33 '3-9 59.61 11.9 0.9 intron Exn + chr3L_12_16970001 chr3L_16970001 0.25 RAL-584_95b 314 chr3L 17113358 17113461 412 18 7546 18 103 '2-16 63.59 10.4 1.6 intron Rbp6 - chr3L_18_17110001 chr3L_17110001 0.11 RAL-584_95b 315 chr3L 17706365 17706451 Juan 4203 13 21 86 '11-10 64.39 8.0 2.3 intron Ccn + chr3L_21_17705001 chr3L_17705001 0.52 RAL-584_95b 316 chr3L 17718975 17719085 297 7 6970 29 110 '10-19 70.12 10.1 2.6 intron Ccn + chr3L_29_17715001 chr3L_17715001 0.34 RAL-584_95b 317 chr3L 17788723 17788845 Stalker2 7248 404 31 122 '18-13 65.82 9.2 3.0 intergenic not near genes chr3L_31_17785001 chr3L_17785001 0.58 RAL-584_95b 318 chr3L 17936966 17937019 jockey 62 8 16 53 '8-8 63.26 17.0 0.9 intron CG43174 + chr3L_16_17935001 chr3L_17935001 0.50 RAL-584_95b 319 chr3L 18024077 18024167 hobo 6 2917 21 90 '14-7 64.08 9.8 1.9 intron Eip75B - chr3L_21_18020001 chr3L_18020001 0.67 RAL-584_95b 320 chr3L 18823041 18823153 hopper 1414 1407 23 112 '15-8 66.20 13.9 1.5 intron Cat + chr3L_23_18820001 chr3L_18820001 0.65 RAL-584_95b 321 chr3L 18888384 18888496 roo 1 401 22 112 '11-11 64.92 8.2 2.4 intron CG3961 - chr3L_22_18885001 chr3L_18885001 0.50 RAL-584_95b 322 chr3L 18926363 18926402 mdg1 7045 7053 8 39 '2-6 60.33 10.4 0.7 intron CG32204 - chr3L_8_18925001 chr3L_18925001 0.25 RAL-584_95b 323 chr3L 18957217 18957255 jockey 4954 4980 15 38 '10-5 63.06 9.3 1.5 intergenic not near genes chr3L_15_18955001 chr3L_18955001 0.67 RAL-584_95b 324 chr3L 19339396 19339436 Tc1 28 5 12 40 '9-3 63.81 9.3 1.2 intergenic not near genes chr3L_12_19335001 chr3L_19335001 0.75 RAL-584_95b 325 chr3L 19396912 19396949 Doc 1 14 7 37 '6-1 55.87 6.3 1.0 intron CG32206 - chr3L_7_19395001 chr3L_19395001 0.86 RAL-584_95b 326 chr3L 19907153 19907259 P-element 2881 6 37 106 '17-20 51.08 11.8 2.9 intron,intron Mi-2 -,Su(Tpl) - chr3L_37_19905001 chr3L_19905001 0.46 RAL-584_95b 327 chr3L 20072731 20072778 X-element 4615 4574 13 47 '9-4 60.62 11.7 1.0 intron sNPF-R - chr3L_13_20070001 chr3L_20070001 0.69 RAL-584_95b 328 chr3L 20187374 20187423 FB 493 711 10 49 '8-2 63.49 29.6 0.3 intron CG42674 - chr3L_10_20185001 chr3L_20185001 0.80 RAL-584_95b 329 chr3L 20247175 20247278 jockey 4667 4988 20 103 '8-12 60.31 8.1 2.2 intergenic not near genes chr3L_20_20245001 chr3L_20245001 0.40 RAL-584_95b 330 chr3L 21108670 21108707 diver 5913 8 13 37 '8-5 65.68 8.9 1.3 intron ko - chr3L_13_21105001 chr3L_21105001 0.62 RAL-584_95b 331 chr3L 21763126 21763237 hobo 1 2933 20 111 '11-9 68.14 9.8 1.9 intron Syn1 - chr3L_20_21760001 chr3L_21760001 0.55 RAL-584_95b 332 chr3L 21874509 21874553 jockey 4675 4698 18 44 '6-12 60.52 13.0 1.3 intron mub + chr3L_18_21870001 chr3L_21870001 0.33 RAL-584_95b 333 chr3L 22002338 22002454 3S18 4 340 41 116 '30-11 61.46 9.4 3.9 intergenic not near genes chr3L_41_22000001 chr3L_22000001 0.73 RAL-584_95b 334 chr3L 22093785 22093897 hopper 1409 1412 16 112 '11-5 64.62 6.6 2.1 intergenic not near genes chr3L_16_22090001 chr3L_22090001 0.69 RAL-584_95b 335 chr3L 22168623 22168705 hopper 1396 5 16 82 '7-9 61.39 9.0 1.6 intron olf413 + chr3L_16_22165001 chr3L_22165001 0.44 RAL-584_95b 336 chr3L 22210238 22210347 Transpac 4925 309 25 109 '11-14 63.94 6.8 3.2 intron olf413 + chr3L_25_22210001 chr3L_22210001 0.44 RAL-584_95b 337 chr3L 22216484 22216572 412 493 8 27 88 '12-15 64.75 11.8 2.1 intron olf413 + chr3L_27_22215001 chr3L_22215001 0.44 RAL-584_95b 338 chr3L 22420399 22420516 roo 8665 406 32 117 '17-15 68.93 7.3 3.9 intergenic CR45237 - chr3L_32_22420001 chr3L_22420001 0.53 RAL-584_95b 339 chr3L 22615613 22615730 roo 8665 406 25 117 '9-16 65.82 9.6 2.4 intron CG14459 - chr3L_25_22615001 chr3L_22615001 0.36 RAL-584_95b 340 chr3L 22744667 22744702 FB 2 33 7 35 '2-5 72.32 4.9 1.2 intron CG7369 + chr3L_7_22740001 chr3L_22740001 0.29 RAL-584_95b 341 chr3L 22848540 22848579 INE-1 542 581 4 39 '1-3 73.16 13.5 0.3 intergenic not near genes chr3L_4_22845001 chr3L_22845001 0.25 RAL-584_95b 342 chr3L 22999136 22999250 pogo 7 2098 26 114 '15-11 66.16 9.4 2.5 intron nrm + chr3L_26_22995001 chr3L_22995001 0.58 RAL-584_95b 343 chr3L 23042019 23042117 opus 7499 7113 18 98 '12-6 65.27 8.0 2.0 intergenic not near genes chr3L_18_23040001 chr3L_23040001 0.67 RAL-584_95b 344 chr3L 23352914 23353026 roo 8664 400 17 112 '12-5 62.08 10.6 1.5 intergenic not near genes chr3L_17_23350001 chr3L_23350001 0.71 RAL-584_95b 345 chr3L 24009175 24009218 G2 2833 2832 14 43 '7-7 59.14 11.2 1.1 intergenic not near genes chr3L_14_24005001 chr3L_24005001 0.50 RAL-584_95b 346 chr3L 24729586 24729624 pogo 2060 2098 6 38 '5-1 66.63 6.2 0.8 intron scro + chr3L_6_24725001 chr3L_24725001 0.83 RAL-584_95b 347 chr3L 25232765 25232858 accord2 182 7450 4 93 '2-2 53.29 12.4 0.3 intergenic not near genes chr3L_4_25230001 chr3L_25230001 0.50 RAL-584_95b 348 chr3L 25272525 25272573 1360 9 71 8 48 '4-4 65.81 8.8 0.8 intron CG40467 - chr3L_8_25270001 chr3L_25270001 0.50 RAL-584_95b 349 chr3L 25412792 25412882 gypsy 21 7439 18 90 '10-8 64.28 5.4 2.8 intergenic not near genes chr3L_18_25410001 chr3L_25410001 0.56 RAL-584_95b 350 chr3L 27174904 27175013 pogo 2085 3 24 109 '5-19 66.16 9.4 2.3 intergenic not near genes chr3L_24_27170001 chr3L_27170001 0.21 RAL-584_95b 351 chr3L 27392391 27392433 gypsy 7448 7406 10 42 '4-6 65.63 17.0 0.6 intron Dbp80 + chr3L_10_27390001 chr3L_27390001 0.40 RAL-584_95b 352 chr3R 3190508 3190578 roo 399 30 15 70 '11-4 66.00 7.8 1.7 intron CG42617 - chr3R_15_3190001 chr3R_3190001 0.73 RAL-584_95b 353 chr3R 4080272 4080388 roo 8665 408 14 116 '8-6 65.33 8.9 1.4 intron CG42402 + chr3R_14_4080001 chr3R_4080001 0.57 RAL-584_95b 354 chr3R 4082433 4082470 297 6961 6972 9 37 '6-3 64.86 10.1 0.8 intron CG42402 + chr3R_9_4080001 chr3R_4080001 0.67 RAL-584_95b 355 chr3R 4502306 4502399 Juan 4215 4024 17 93 '9-8 61.47 12.1 1.3 intron CG34357 - chr3R_17_4500001 chr3R_4500001 0.53 RAL-584_95b 356 chr3R 4549227 4549319 1731 299 10 8 92 '1-7 62.99 11.1 0.7 intron CG34357 - chr3R_8_4545001 chr3R_4545001 0.12 RAL-584_95b 357 chr3R 4553269 4553410 Juan 42 11 24 141 '13-11 61.22 5.0 4.0 intron CG34357 - chr3R_24_4550001 chr3R_4550001 0.54 RAL-584_95b 358 chr3R 4554288 4554398 Bari1 1703 11 36 110 '21-15 66.37 9.4 3.5 intron CG34357 - chr3R_36_4550001 chr3R_4550001 0.58 RAL-584_95b 359 chr3R 5057974 5058094 297 6581 6973 33 120 '13-20 67.74 11.3 2.7 intergenic not near genes chr3R_33_5055001 chr3R_5055001 0.39 RAL-584_95b 360 chr3R 5131056 5131147 roo 410 8675 18 91 '7-11 68.22 8.8 1.8 intergenic not near genes chr3R_18_5130001 chr3R_5130001 0.39 RAL-584_95b 361 chr3R 5143443 5143557 Tirant 8500 8111 18 114 '8-10 64.43 7.9 2.0 intergenic not near genes chr3R_18_5140001 chr3R_5140001 0.44 RAL-584_95b 362 chr3R 5684055 5684173 pogo 4 2099 27 118 '17-10 64.92 11.9 2.1 intron Rab23 - chr3R_27_5680001 chr3R_5680001 0.63 RAL-584_95b 363 chr3R 5966458 5966574 roo 8664 403 24 116 '13-11 67.11 10.4 2.1 intergenic CR44925 + chr3R_24_5965001 chr3R_5965001 0.54 RAL-584_95b 364 chr3R 6087813 6087932 roo 409 8666 47 119 '26-21 65.31 9.8 4.4 intergenic not near genes chr3R_47_6085001 chr3R_6085001 0.55 RAL-584_95b 365 chr3R 6506231 6506336 Max-element 297 12 23 105 '11-12 59.32 7.6 2.7 intergenic not near genes chr3R_23_6505001 chr3R_6505001 0.48 RAL-584_95b 366 chr3R 6521522 6521616 FB 2 16 16 94 '6-10 63.44 5.7 2.4 intergenic not near genes chr3R_16_6520001 chr3R_6520001 0.38 RAL-584_95b 367 chr3R 6623206 6623317 mdg1 7044 417 9 111 '8-1 66.83 9.9 0.8 intergenic not near genes chr3R_9_6620001 chr3R_6620001 0.89 RAL-584_95b 368 chr3R 6875930 6876033 roo 404 4 21 103 '12-9 55.01 7.4 2.5 intergenic not near genes chr3R_21_6875001 chr3R_6875001 0.57 RAL-584_95b 369 chr3R 7283469 7283498 jockey 10 16 7 29 '4-3 60.33 7.3 0.8 intron rn - chr3R_7_7280001 chr3R_7280001 0.57 RAL-584_95b 370 chr3R 7665603 7665639 Doc 4 40 10 36 '2-8 50.22 10.9 0.8 intron Nlg1 + chr3R_10_7665001 chr3R_7665001 0.20 RAL-584_95b 371 chr3R 7956628 7956794 Tc3 318 311 9 166 '5-4 56.59 8.6 0.9 intron dsx - chr3R_9_7955001 chr3R_7955001 0.56 RAL-584_95b 372 chr3R 8090504 8090555 P-element 2886 27 15 51 '6-9 54.17 6.2 2.1 intergenic CR44330 + chr3R_15_8090001 chr3R_8090001 0.40 RAL-584_95b 373 chr3R 8688870 8688952 jockey 4973 15 18 82 '13-5 64.36 10.0 1.6 intergenic not near genes chr3R_18_8685001 chr3R_8685001 0.72 RAL-584_95b 374 chr3R 8963804 8963888 P-element 66 2885 16 84 '7-9 50.96 9.2 1.6 intergenic not near genes chr3R_16_8960001 chr3R_8960001 0.44 RAL-584_95b 375 chr3R 9003716 9003822 Max-element 8235 8521 18 106 '11-7 61.63 7.1 2.2 intergenic CG31100 -,CG11980 + chr3R_18_9000001 chr3R_9000001 0.61 RAL-584_95b 376 chr3R 9106165 9106268 1360 6 3379 23 103 '14-9 64.70 9.0 2.3 intron pum - chr3R_23_9105001 chr3R_9105001 0.61 RAL-584_95b 377 chr3R 9161619 9161733 pogo 5 2096 28 114 '16-12 64.02 8.6 2.9 intron pum - chr3R_28_9160001 chr3R_9160001 0.57 RAL-584_95b 378 chr3R 9192494 9192612 invader3 4 279 32 118 '15-17 67.62 10.1 2.9 intron pum - chr3R_32_9190001 chr3R_9190001 0.47 RAL-584_95b 379 chr3R 9347054 9347165 S-element 5 1708 38 111 '12-26 70.12 10.6 3.3 intron CG45050 + chr3R_38_9345001 chr3R_9345001 0.32 RAL-584_95b 380 chr3R 9347591 9347703 S-element 7 1711 31 112 '17-14 67.49 9.9 2.8 intron CG45050 + chr3R_31_9345001 chr3R_9345001 0.55 RAL-584_95b 381 chr3R 10026215 10026324 FB 6 1 29 109 '17-12 61.85 9.1 2.9 intron Mical - chr3R_29_10025001 chr3R_10025001 0.59 RAL-584_95b 382 chr3R 10089599 10089636 BS 7 8 11 37 '7-4 60.90 8.6 1.1 5` UTR CR45054 + chr3R_11_10085001 chr3R_10085001 0.64 RAL-584_95b 383 chr3R 10126503 10126620 roo 8663 404 35 117 '20-15 65.53 14.7 2.2 intergenic not near genes chr3R_35_10125001 chr3R_10125001 0.57 RAL-584_95b 384 chr3R 10139207 10139329 Tirant 8108 398 18 122 '5-13 66.02 6.8 2.3 intron tws - chr3R_18_10135001 chr3R_10135001 0.28 RAL-584_95b 385 chr3R 10203689 10203736 jockey 56 5 15 47 '6-9 65.78 9.0 1.5 intron Syn + chr3R_15_10200001 chr3R_10200001 0.40 RAL-584_95b 386 chr3R 10668491 10668591 Tabor 7309 1 32 100 '18-14 61.43 7.1 4.0 intergenic not near genes chr3R_32_10665001 chr3R_10665001 0.56 RAL-584_95b 387 chr3R 10990729 10990851 roo 8664 411 33 122 '10-23 68.18 8.1 3.6 intron CG34114 + chr3R_33_10990001 chr3R_10990001 0.30 RAL-584_95b 388 chr3R 11131395 11131506 blood 1 368 20 111 '7-13 64.09 3.4 4.5 intergenic not near genes chr3R_20_11130001 chr3R_11130001 0.35 RAL-584_95b 389 chr3R 11142186 11142300 Max-element 8 302 20 114 '5-15 63.41 8.0 2.2 intergenic not near genes chr3R_20_11140001 chr3R_11140001 0.25 RAL-584_95b 390 chr3R 11181591 11181707 roo 9066 8663 31 116 '19-12 67.08 9.7 2.9 intergenic not near genes chr3R_31_11180001 chr3R_11180001 0.61 RAL-584_95b 391 chr3R 11412334 11412439 Tabor 474 4 30 105 '12-18 62.26 15.0 1.9 3` UTR Irbp + chr3R_30_11410001 chr3R_11410001 0.40 RAL-584_95b 392 chr3R 11449194 11449238 Doc 272 281 11 44 '5-6 63.12 11.6 0.9 intron,intron sals -,CG17230 + chr3R_11_11445001 chr3R_11445001 0.45 RAL-584_95b 393 chr3R 11471205 11471254 F-element 4675 4625 12 49 '7-5 66.42 11.9 0.9 intergenic not near genes chr3R_12_11470001 chr3R_11470001 0.58 RAL-584_95b 394 chr3R 11553637 11553750 hopper 1411 4 14 113 '10-4 62.95 10.1 1.3 intergenic not near genes chr3R_14_11550001 chr3R_11550001 0.71 RAL-584_95b 395 chr3R 12021439 12021482 opus 7482 4 10 43 '6-4 52.69 12.4 0.7 intergenic not near genes chr3R_10_12020001 chr3R_12020001 0.60 RAL-584_95b 396 chr3R 12130803 12130834 jockey 26 30 10 31 '3-7 63.02 12.0 0.8 intergenic not near genes chr3R_10_12130001 chr3R_12130001 0.30 RAL-584_95b 397 chr3R 12134463 12134516 diver 192 225 23 53 '13-10 66.57 12.0 1.8 intergenic not near genes chr3R_23_12130001 chr3R_12130001 0.57 RAL-584_95b 398 chr3R 12720455 12720575 Max-element 1 301 33 120 '20-13 64.25 9.3 3.2 intron Men - chr3R_33_12720001 chr3R_12720001 0.61 RAL-584_95b 399 chr3R 13225488 13225588 hobo 16 2938 15 100 '10-5 60.51 10.3 1.3 intron Ace - chr3R_15_13225001 chr3R_13225001 0.67 RAL-584_95b 400 chr3R 13349500 13349588 Ivk 5360 8 25 88 '15-10 60.92 5.3 4.0 intergenic not near genes chr3R_25_13345001 chr3R_13345001 0.60 RAL-584_95b 401 chr3R 13437170 13437253 hopper 1404 1412 13 83 '5-8 63.73 6.6 1.7 intergenic not near genes chr3R_13_13435001 chr3R_13435001 0.38 RAL-584_95b 402 chr3R 13525662 13525759 hobo 2 2920 22 97 '17-5 66.80 6.5 2.9 intergenic not near genes chr3R_22_13525001 chr3R_13525001 0.77 RAL-584_95b 403 chr3R 13852418 13852522 mdg1 421 1 20 104 '12-8 62.81 10.8 1.7 intergenic not near genes chr3R_20_13850001 chr3R_13850001 0.60 RAL-584_95b 404 chr3R 13975675 13975785 pogo 10 2097 21 110 '11-10 67.57 12.4 1.6 intron rdx - chr3R_21_13975001 chr3R_13975001 0.52 RAL-584_95b 405 chr3R 13992798 13992888 roo 20 408 21 90 '7-14 67.70 9.1 2.1 intron rdx - chr3R_21_13990001 chr3R_13990001 0.33 RAL-584_95b 406 chr3R 14046379 14046494 S-element 1710 2 11 115 '2-9 68.37 7.3 1.3 intergenic not near genes chr3R_11_14045001 chr3R_14045001 0.18 RAL-584_95b 407 chr3R 14049331 14049438 transib2 10 2820 22 107 '12-10 63.27 12.3 1.7 intergenic not near genes chr3R_22_14045001 chr3R_14045001 0.55 RAL-584_95b 408 chr3R 14206151 14206269 opus 495 1 20 118 '9-11 66.27 8.8 2.0 intron Dop1R1 - chr3R_20_14205001 chr3R_14205001 0.45 RAL-584_95b 409 chr3R 14225084 14225178 copia 234 5 37 94 '23-14 63.39 7.8 4.2 intergenic CG9631 - chr3R_37_14225001 chr3R_14225001 0.62 RAL-584_95b 410 chr3R 14608715 14608767 jockey 23 8 12 52 '7-5 62.46 10.9 1.0 intergenic not near genes chr3R_12_14605001 chr3R_14605001 0.58 RAL-584_95b 411 chr3R 14688245 14688341 pogo 2084 2 12 96 '1-11 56.34 1.6 4.6 intron Meltrin - chr3R_12_14685001 chr3R_14685001 0.08 RAL-584_95b 412 chr3R 14991670 14991772 hopper 1403 1408 14 102 '4-10 65.82 8.8 1.4 intergenic not near genes chr3R_14_14990001 chr3R_14990001 0.29 RAL-584_95b 413 chr3R 16068376 16068420 jockey 12 4 12 44 '7-5 60.92 7.4 1.4 intergenic Mhcl - chr3R_12_16065001 chr3R_16065001 0.58 RAL-584_95b 414 chr3R 16415395 16415514 mdg3 244 5252 31 119 '16-15 64.49 9.9 2.8 intergenic not near genes chr3R_31_16415001 chr3R_16415001 0.52 RAL-584_95b 415 chr3R 17109007 17109055 jockey 4675 4672 14 48 '10-4 59.81 15.5 0.8 intron cher - chr3R_14_17105001 chr3R_17105001 0.71 RAL-584_95b 416 chr3R 17288809 17288922 297 389 4 16 113 '8-8 74.25 6.6 2.1 5` UTR CR43490 + chr3R_16_17285001 chr3R_17285001 0.50 RAL-584_95b 417 chr3R 17362511 17362626 Stalker2 7649 7245 24 115 '14-10 65.50 11.6 1.9 intron beat-IIa - chr3R_24_17360001 chr3R_17360001 0.58 RAL-584_95b 418 chr3R 17401704 17401799 Juan 4200 4 14 95 '7-7 61.35 9.8 1.3 intron Sur-8 - chr3R_14_17400001 chr3R_17400001 0.50 RAL-584_95b 419 chr3R 17421242 17421346 297 385 9 20 104 '12-8 69.65 7.3 2.4 intergenic CG42835 +,CG14332 - chr3R_20_17420001 chr3R_17420001 0.60 RAL-584_95b 420 chr3R 17673736 17673851 FB 1 1 35 115 '19-16 66.85 9.8 3.2 exon,3` UTR ald +,alt - chr3R_35_17670001 chr3R_17670001 0.54 RAL-584_95b 421 chr3R 17733238 17733340 INE-1 562 556 8 102 '6-2 72.08 5.6 1.2 intergenic Lgr1 +,CG14321 + chr3R_8_17730001 chr3R_17730001 0.75 RAL-584_95b 422 chr3R 17954246 17954331 297 6938 6581 28 85 '16-12 67.16 10.0 2.5 intron cpo + chr3R_28_17950001 chr3R_17950001 0.57 RAL-584_95b 423 chr3R 18029176 18029242 1360 3387 33 5 66 '1-4 76.46 4.1 1.0 intergenic not near genes chr3R_5_18025001 chr3R_18025001 0.20 RAL-584_95b 424 chr3R 18851033 18851082 flea 4786 4759 11 49 '2-9 67.68 8.2 1.2 3` UTR CR45633 - chr3R_11_18850001 chr3R_18850001 0.18 RAL-584_95b 425 chr3R 18962623 18962675 jockey 4784 4757 14 52 '11-3 64.01 9.4 1.3 intron,intron CG42613 +,CG43732 + chr3R_14_18960001 chr3R_18960001 0.79 RAL-584_95b 426 chr3R 19220480 19220529 Doc 11 4 14 49 '11-3 62.19 7.9 1.6 intron vib - chr3R_14_19220001 chr3R_19220001 0.79 RAL-584_95b 427 chr3R 19514481 19514580 I-element 5342 2 27 99 '13-14 59.21 7.6 3.1 intron Dys + chr3R_27_19510001 chr3R_19510001 0.48 RAL-584_95b 428 chr3R 19939107 19939202 jockey 4773 4988 18 95 '3-15 60.35 6.4 2.4 intron Hs6st - chr3R_18_19935001 chr3R_19935001 0.17 RAL-584_95b 429 chr3R 20231924 20231961 jockey 14 10 11 37 '7-4 59.25 16.5 0.6 intron Nlg4 + chr3R_11_20230001 chr3R_20230001 0.64 RAL-584_95b 430 chr3R 20359824 20359868 roo 8673 8691 16 44 '8-8 70.73 13.0 1.1 5` UTR CR45023 + chr3R_16_20355001 chr3R_20355001 0.50 RAL-584_95b 431 chr3R 20409604 20409704 hopper 2 13 15 100 '9-6 67.26 7.0 1.9 intron Gfrl - chr3R_15_20405001 chr3R_20405001 0.60 RAL-584_95b 432 chr3R 20490021 20490050 Doc 25 44 12 29 '7-5 61.05 14.6 0.8 intergenic not near genes chr3R_12_20490001 chr3R_20490001 0.58 RAL-584_95b 433 chr3R 20696574 20696625 BS 4993 5044 12 51 '6-6 64.14 8.0 1.3 intron Oamb - chr3R_12_20695001 chr3R_20695001 0.50 RAL-584_95b 434 chr3R 20845031 20845144 17.6 9 492 19 113 '4-15 65.11 12.4 1.4 intergenic CG15695 + chr3R_19_20845001 chr3R_20845001 0.21 RAL-584_95b 435 chr3R 20945003 20945098 springer 7522 13 8 95 '3-5 51.84 1.4 3.3 intron CG31191 - chr3R_8_20945001 chr3R_20945001 0.38 RAL-584_95b 436 chr3R 21011420 21011530 opus 7493 7114 21 110 '13-8 70.43 11.6 1.7 intron Calx + chr3R_21_21010001 chr3R_21010001 0.62 RAL-584_95b 437 chr3R 21603585 21603623 F-element 476 491 8 38 '4-4 68.09 16.5 0.5 intron InR - chr3R_8_21600001 chr3R_21600001 0.50 RAL-584_95b 438 chr3R 22226566 22226684 roo 4 410 36 118 '15-21 65.58 4.6 6.4 intron SKIP + chr3R_36_22225001 chr3R_22225001 0.42 RAL-584_95b 439 chr3R 22258617 22258698 roo 5 407 17 81 '9-8 69.00 12.2 1.3 intron SKIP + chr3R_17_22255001 chr3R_22255001 0.53 RAL-584_95b 440 chr3R 22260225 22260327 roo 404 8672 20 102 '6-14 67.18 11.2 1.6 intron SKIP + chr3R_20_22260001 chr3R_22260001 0.30 RAL-584_95b 441 chr3R 22633155 22633223 Tirant 53 382 17 68 '11-6 53.11 7.5 2.0 intron loco - chr3R_17_22630001 chr3R_22630001 0.65 RAL-584_95b 442 chr3R 22771187 22771226 I-element 5329 5347 10 39 '4-6 62.88 3.7 2.1 intron,intron,3` UTR CG7029 +,Usp12-46 +,CG43095 - chr3R_10_22770001 chr3R_22770001 0.40 RAL-584_95b 443 chr3R 22864305 22864344 jockey 4766 4804 6 39 '1-5 60.86 3.7 1.3 intergenic not near genes chr3R_6_22860001 chr3R_22860001 0.17 RAL-584_95b 444 chr3R 23403899 23404013 roo 8665 403 36 114 '15-21 64.40 13.7 2.4 exon Ir94d + chr3R_36_23400001 chr3R_23400001 0.42 RAL-584_95b 445 chr3R 24072005 24072088 jockey 17 4982 29 83 '8-21 54.34 9.1 2.9 intron 4EHP - chr3R_29_24070001 chr3R_24070001 0.28 RAL-584_95b 446 chr3R 25087418 25087698 jockey2 3380 3184 9 280 '1-8 79.60 1.9 3.1 intergenic not near genes chr3R_9_25085001 chr3R_25085001 0.11 RAL-584_95b 447 chr3R 25239206 25239241 HB 1623 1628 4 35 '3-1 62.04 13.4 0.3 intergenic CG11852 + chr3R_4_25235001 chr3R_25235001 0.75 RAL-584_95b 448 chr3R 25508482 25508542 hobo 2916 25 15 60 '3-12 60.85 6.6 2.0 intergenic CG5111 + chr3R_15_25505001 chr3R_25505001 0.20 RAL-584_95b 449 chr3R 25578078 25578192 roo 401 8663 33 114 '20-13 62.38 8.6 3.4 intron msi + chr3R_33_25575001 chr3R_25575001 0.61 RAL-584_95b 450 chr3R 25908947 25908987 Juan 48 5 15 40 '11-4 59.09 9.7 1.4 intron CG42235 + chr3R_15_25905001 chr3R_25905001 0.73 RAL-584_95b 451 chr3R 26259672 26259780 hobo 1 2931 30 108 '24-6 64.41 11.6 2.4 intron Ald - chr3R_30_26255001 chr3R_26255001 0.80 RAL-584_95b 452 chr3R 26655643 26655669 jockey 4681 4692 7 26 '2-5 60.03 7.8 0.8 intron beat-VII - chr3R_7_26655001 chr3R_26655001 0.29 RAL-584_95b 453 chr3R 26712892 26713005 hobo 2937 3 21 113 '10-11 60.66 9.1 2.1 intron amon - chr3R_21_26710001 chr3R_26710001 0.48 RAL-584_95b 454 chr3R 26784888 26785003 Burdock 254 7 28 115 '10-18 62.26 8.8 2.9 3` UTR CG42790 + chr3R_28_26780001 chr3R_26780001 0.36 RAL-584_95b 455 chr3R 27035036 27035146 roo 8665 399 27 110 '19-8 66.18 12.1 2.1 intron RYa-R + chr3R_27_27035001 chr3R_27035001 0.70 RAL-584_95b 456 chr3R 27420919 27421022 Stalker2 388 3 28 103 '15-13 62.65 10.4 2.5 intron side - chr3R_28_27420001 chr3R_27420001 0.54 RAL-584_95b 457 chr3R 27606042 27606132 pogo 2097 28 24 90 '11-13 66.73 8.6 2.5 intron dsd - chr3R_24_27605001 chr3R_27605001 0.46 RAL-584_95b 458 chr3R 27782456 27782534 pogo 2066 10 16 78 '6-10 66.02 8.7 1.6 intron CG34353 - chr3R_16_27780001 chr3R_27780001 0.38 RAL-584_95b 459 chr3R 27898202 27898310 roo 8665 397 35 108 '15-20 65.44 9.9 3.2 intron CG34353 - chr3R_35_27895001 chr3R_27895001 0.43 RAL-584_95b 460 chr3R 28184498 28184567 I-element 5333 2 15 69 '8-7 63.13 2.9 3.8 intron CG34354 + chr3R_15_28180001 chr3R_28180001 0.53 RAL-584_95b 461 chr3R 28204458 28204557 Transpac 4941 5228 19 99 '10-9 63.30 7.2 2.3 intron CG34354 + chr3R_19_28200001 chr3R_28200001 0.53 RAL-584_95b 462 chr3R 28885783 28885891 1360 5 3383 36 108 '14-22 66.22 9.9 3.3 intron,exon CG33203 -,CG14526 + chr3R_36_28885001 chr3R_28885001 0.39 RAL-584_95b 463 chr3R 28991167 28991254 Juan 4205 12 29 87 '16-13 60.82 11.1 2.4 intergenic not near genes chr3R_29_28990001 chr3R_28990001 0.55 RAL-584_95b 464 chr3R 29089176 29089294 roo 410 8669 40 118 '21-19 65.23 11.3 3.3 intron CG11873 + chr3R_40_29085001 chr3R_29085001 0.53 RAL-584_95b 465 chr3R 29171887 29171981 roo 8678 396 19 94 '12-7 65.83 9.7 1.8 3` UTR CG14509 - chr3R_19_29170001 chr3R_29170001 0.63 RAL-584_95b 466 chr3R 29384223 29384351 jockey 4978 4652 18 128 '9-9 59.34 5.5 2.8 intron Ptp99A + chr3R_18_29380001 chr3R_29380001 0.50 RAL-584_95b 467 chr3R 29635971 29636005 Rt1a 49 15 6 34 '4-2 63.23 9.3 0.6 intron Dop1R2 - chr3R_6_29635001 chr3R_29635001 0.67 RAL-584_95b 468 chr3R 30277881 30277966 P-element 2860 2881 16 85 '6-10 46.86 8.8 1.6 intergenic hdc + chr3R_16_30275001 chr3R_30275001 0.38 RAL-584_95b 469 chr3R 30345670 30345697 S-element 2 1687 4 27 '3-1 66.74 13.3 0.3 intron hdc + chr3R_4_30345001 chr3R_30345001 0.75 RAL-584_95b 470 chr3R 30345751 30345780 rover 41 12 12 29 '7-5 64.17 7.7 1.4 intron hdc + chr3R_12_30345001 chr3R_30345001 0.58 RAL-584_95b 471 chr3R 30641894 30641931 I-element 4890 4879 17 37 '12-5 59.20 7.6 2.0 intergenic not near genes chr3R_17_30640001 chr3R_30640001 0.71 RAL-584_95b 472 chr3R 30765642 30765745 P-element 2879 2885 26 103 '8-18 46.12 9.2 2.5 intergenic zfh1 + chr3R_26_30765001 chr3R_30765001 0.31 RAL-584_95b 473 chr3R 30859379 30859505 Burdock 253 6136 23 126 '16-7 60.25 2.7 6.2 intergenic not near genes chr3R_23_30855001 chr3R_30855001 0.70 RAL-584_95b 474 chr3R 30966040 30966087 jockey 12 18 10 47 '4-6 62.88 8.4 1.1 intergenic not near genes chr3R_10_30965001 chr3R_30965001 0.40 RAL-584_95b 475 chr3R 31138054 31138131 roo 9034 8663 15 77 '7-8 67.53 6.3 2.1 intron Gycbeta100B + chr3R_15_31135001 chr3R_31135001 0.47 RAL-584_95b 476 chr3R 31140386 31140511 roo 8662 411 30 125 '14-16 64.47 8.3 3.2 intron Gycbeta100B + chr3R_30_31140001 chr3R_31140001 0.47 RAL-584_95b 477 chr3R 31205759 31205788 Tc3 312 238 4 29 '2-2 75.84 19.0 0.2 exon chp - chr3R_4_31205001 chr3R_31205001 0.50 RAL-584_95b 478 chr3R 31205765 31205878 1360 3384 3388 36 113 '19-17 67.76 11.3 2.9 exon chp - chr3R_36_31205001 chr3R_31205001 0.53 RAL-584_95b 479 chr3R 31264173 31264198 jockey 10 35 11 25 '5-6 51.19 19.8 0.5 intergenic CG18673 + chr3R_11_31260001 chr3R_31260001 0.45 RAL-584_95b 480 chr3R 31278715 31278829 roo 8666 403 31 114 '15-16 67.52 13.9 2.1 intergenic not near genes chr3R_31_31275001 chr3R_31275001 0.48 RAL-584_95b 481 chr3R 31368053 31368173 roo 410 2 32 120 '16-16 69.84 7.3 3.9 intron CG34347 + chr3R_32_31365001 chr3R_31365001 0.50 RAL-584_95b 482 chr3R 31458050 31458096 jockey 9 56 15 46 '7-8 61.82 14.3 1.0 intergenic Gprk2 +,lox - chr3R_15_31455001 chr3R_31455001 0.47 RAL-584_95b 483 chr3R 31639648 31639761 roo 8667 405 31 113 '14-17 67.11 9.2 3.0 intron kek6 + chr3R_31_31635001 chr3R_31635001 0.45 RAL-584_95b 484 chr3R 31897455 31897537 mdg1 7040 385 12 82 '4-8 66.25 6.3 1.6 intron heph - chr3R_12_31895001 chr3R_31895001 0.33 RAL-584_95b 485 chr4 299459 299576 roo 8663 406 9 117 '7-2 68.09 9.5 0.9 intron Syt7 - chr4_9_295001 chr4_295001 0.78 RAL-584_95b 486 chrX 318454 318490 297 382 6938 16 36 '8-8 66.76 11.9 1.2 intron,intron CG3777 +,CG32816 - chrX_16_315001 chrX_315001 0.50 RAL-584_95b 487 chrX 323555 323590 297 42 6588 16 35 '8-8 60.51 4.6 2.9 intron,intron CG3777 +,CG32816 - chrX_16_320001 chrX_320001 0.50 RAL-584_95b 488 chrX 868743 868811 roo 9 408 4 68 '2-2 60.93 9.8 0.4 intron CG43867 - chrX_4_865001 chrX_865001 0.50 RAL-584_95b 489 chrX 887530 887624 412 18 484 20 94 '10-10 63.88 7.5 2.4 intron CG43867 - chrX_20_885001 chrX_885001 0.50 RAL-584_95b 490 chrX 986911 987013 412 21 495 28 102 '13-15 62.96 9.3 2.7 intergenic not near genes chrX_28_985001 chrX_985001 0.46 RAL-584_95b 491 chrX 1018111 1018157 1360 191 190 6 46 '3-3 68.15 6.6 0.8 intron,intron su(w[a]) +,CG11638 - chrX_6_1015001 chrX_1015001 0.50 RAL-584_95b 492 chrX 1405468 1405583 roo 8663 402 28 115 '14-14 65.76 8.4 3.0 intergenic not near genes chrX_28_1405001 chrX_1405001 0.50 RAL-584_95b 493 chrX 2476322 2476430 HMS-Beagle 1 243 30 108 '16-14 64.63 6.1 4.2 intron trol - chrX_30_2475001 chrX_2475001 0.53 RAL-584_95b 494 chrX 2525588 2525697 roo 401 8668 21 109 '9-12 68.06 9.8 1.9 intron trol - chrX_21_2525001 chrX_2525001 0.43 RAL-584_95b 495 chrX 2553074 2553158 Transpac 5 5196 19 84 '14-5 65.78 4.4 3.5 intron Pdfr + chrX_19_2550001 chrX_2550001 0.74 RAL-584_95b 496 chrX 2918480 2918575 FB 1 18 17 95 '10-7 64.54 6.0 2.4 intron kirre + chrX_17_2915001 chrX_2915001 0.59 RAL-584_95b 497 chrX 3270853 3270952 roo 393 6 26 99 '10-16 64.72 11.2 2.1 intron dnc + chrX_26_3270001 chrX_3270001 0.38 RAL-584_95b 498 chrX 3274302 3274373 hobo 2921 5 8 71 '4-4 60.81 7.3 1.0 intron dnc + chrX_8_3270001 chrX_3270001 0.50 RAL-584_95b 499 chrX 3382260 3382374 1360 3381 3386 25 114 '13-12 68.18 2.5 7.1 intron,intron CR44999 +,dm + chrX_25_3380001 chrX_3380001 0.52 RAL-584_95b 500 chrX 3451364 3451472 P-element 2883 2 16 108 '8-8 49.45 7.3 1.9 intron CR44999 + chrX_16_3450001 chrX_3450001 0.50 RAL-584_95b 501 chrX 3679079 3679195 S-element 1712 1712 18 116 '6-12 69.51 9.6 1.7 intron Mnt + chrX_18_3675001 chrX_3675001 0.33 RAL-584_95b 502 chrX 4796233 4796272 jockey 19 18 7 39 '3-4 64.25 7.0 0.9 intergenic not near genes chrX_7_4795001 chrX_4795001 0.43 RAL-584_95b 503 chrX 5540647 5540714 hobo 2907 15 15 67 '4-11 65.52 8.0 1.7 intron Vsx2 - chrX_15_5540001 chrX_5540001 0.27 RAL-584_95b 504 chrX 5759713 5759821 Tabor 12 396 31 108 '14-17 58.90 9.0 3.1 3` UTR CG15771 + chrX_31_5755001 chrX_5755001 0.45 RAL-584_95b 505 chrX 6377587 6377616 pogo 2095 2066 7 29 '2-5 62.26 11.3 0.6 intergenic not near genes chrX_7_6375001 chrX_6375001 0.29 RAL-584_95b 506 chrX 6600863 6600937 Tirant 40 8496 18 74 '9-9 64.46 6.5 2.4 intron pigs + chrX_18_6600001 chrX_6600001 0.50 RAL-584_95b 507 chrX 6908224 6908323 P-element 9 10 11 99 '4-7 51.92 4.4 2.0 intergenic CG14431 + chrX_11_6905001 chrX_6905001 0.36 RAL-584_95b 508 chrX 6959804 6959910 Stalker2 400 7251 24 106 '16-8 64.95 8.2 2.6 intron,intron CG14431 +,CG32732 - chrX_24_6955001 chrX_6955001 0.67 RAL-584_95b 509 chrX 7836630 7836682 F-element 423 421 11 52 '6-5 64.07 9.6 1.0 intron CG1402 + chrX_11_7835001 chrX_7835001 0.55 RAL-584_95b 510 chrX 8007957 8007995 BS 4 25 17 38 '5-12 63.71 11.8 1.3 intron Tbh + chrX_17_8005001 chrX_8005001 0.29 RAL-584_95b 511 chrX 8027431 8027516 Juan 4204 3 9 85 '3-6 64.57 9.7 0.8 intergenic Tbh + chrX_9_8025001 chrX_8025001 0.33 RAL-584_95b 512 chrX 8339988 8340018 copia 6 4921 8 30 '7-1 58.43 3.6 1.7 intron nAChRalpha3 - chrX_8_8335001 chrX_8335001 0.88 RAL-584_95b 513 chrX 8644400 8644500 I-element 5335 5344 11 100 '5-6 60.50 8.7 1.1 intron oc - chrX_11_8640001 chrX_8640001 0.45 RAL-584_95b 514 chrX 8795648 8795690 Burdock 6379 6352 7 42 '4-3 65.85 7.6 0.8 intron Lim1 - chrX_7_8795001 chrX_8795001 0.57 RAL-584_95b 515 chrX 8914086 8914127 jockey 15 57 9 41 '6-3 57.07 2.4 2.6 intron rdgA + chrX_9_8910001 chrX_8910001 0.67 RAL-584_95b 516 chrX 9272991 9273095 pogo 10 2096 18 104 '9-9 68.72 10.0 1.6 intergenic Cfp1 -,CG16892 + chrX_18_9270001 chrX_9270001 0.50 RAL-584_95b 517 chrX 9514115 9514230 McClintock 2 474 24 115 '10-14 67.56 6.9 3.0 intron CG32700 - chrX_24_9510001 chrX_9510001 0.42 RAL-584_95b 518 chrX 9524957 9525024 hobo 2923 2 12 67 '6-6 69.72 3.4 2.7 intron CG32700 - chrX_12_9520001 chrX_9520001 0.50 RAL-584_95b 519 chrX 9537978 9538077 hobo 8 2928 17 99 '8-9 64.88 7.9 1.9 intron CG32700 - chrX_17_9535001 chrX_9535001 0.47 RAL-584_95b 520 chrX 9829022 9829127 297 10 6968 16 105 '5-11 67.33 4.0 3.2 intron CG32698 + chrX_16_9825001 chrX_9825001 0.31 RAL-584_95b 521 chrX 9889396 9889499 hobo 12 2706 18 103 '13-5 63.09 5.7 2.7 intron CG15249 - chrX_18_9885001 chrX_9885001 0.72 RAL-584_95b 522 chrX 9949493 9949593 jockey 14 4988 12 100 '4-8 64.37 8.5 1.3 intergenic not near genes chrX_12_9945001 chrX_9945001 0.33 RAL-584_95b 523 chrX 10112924 10113013 FB 3 7 9 89 '3-6 58.81 4.8 1.6 intron RhoU + chrX_9_10110001 chrX_10110001 0.33 RAL-584_95b 524 chrX 10266150 10266202 S-element 1 1715 9 52 '6-3 66.48 8.9 0.9 intergenic not near genes chrX_9_10265001 chrX_10265001 0.67 RAL-584_95b 525 chrX 10266570 10266613 S-element 1675 1715 8 43 '3-5 69.96 6.0 1.1 intergenic alpha-Man-I - chrX_8_10265001 chrX_10265001 0.38 RAL-584_95b 526 chrX 10290137 10290192 P-element 20 2865 18 55 '9-9 43.47 5.6 2.7 intron alpha-Man-I - chrX_18_10290001 chrX_10290001 0.50 RAL-584_95b 527 chrX 10521161 10521271 roo 8671 405 27 110 '15-12 65.11 7.6 3.1 intron spri - chrX_27_10520001 chrX_10520001 0.56 RAL-584_95b 528 chrX 10550785 10550889 roo 402 8674 21 104 '16-5 70.92 3.6 4.6 intron spri - chrX_21_10550001 chrX_10550001 0.76 RAL-584_95b 529 chrX 10740162 10740268 roo 9061 3 41 106 '12-29 63.52 11.9 3.2 intron CG32676 - chrX_41_10740001 chrX_10740001 0.29 RAL-584_95b 530 chrX 10966627 10966719 Stalker2 383 9 29 92 '13-16 60.86 5.3 4.6 intron C901 - chrX_29_10965001 chrX_10965001 0.45 RAL-584_95b 531 chrX 12041506 12041616 297 6591 392 22 110 '9-13 68.57 8.3 2.4 intergenic not near genes chrX_22_12040001 chrX_12040001 0.41 RAL-584_95b 532 chrX 12197086 12197172 pogo 17 2080 15 86 '11-4 64.14 5.9 2.2 intron Ten-a + chrX_15_12195001 chrX_12195001 0.73 RAL-584_95b 533 chrX 12396362 12396403 I-element 5336 5346 11 41 '6-5 62.79 8.0 1.2 intergenic not near genes chrX_11_12395001 chrX_12395001 0.55 RAL-584_95b 534 chrX 12531235 12531347 Transpac 4928 309 14 112 '8-6 65.77 6.3 1.9 intron CG43921 - chrX_14_12530001 chrX_12530001 0.57 RAL-584_95b 535 chrX 12938364 12938435 P-element 9 22 13 71 '4-9 42.02 2.6 3.6 intron fne + chrX_13_12935001 chrX_12935001 0.31 RAL-584_95b 536 chrX 13159743 13159837 P-element 2 12 16 94 '5-11 45.40 10.1 1.4 intergenic CG12096 +,Bap60 - chrX_16_13155001 chrX_13155001 0.31 RAL-584_95b 537 chrX 13278026 13278140 Burdock 6140 251 27 114 '9-18 64.33 8.9 2.7 intron HDAC4 - chrX_27_13275001 chrX_13275001 0.33 RAL-584_95b 538 chrX 13545345 13545441 roo 8692 411 19 96 '1-18 62.27 4.2 3.7 intergenic Cpr12A + chrX_19_13545001 chrX_13545001 0.05 RAL-584_95b 539 chrX 13857686 13857805 roo 8661 405 22 119 '9-13 67.77 9.5 2.1 intron mamo - chrX_22_13855001 chrX_13855001 0.41 RAL-584_95b 540 chrX 14323652 14323717 roo 403 25 8 65 '4-4 63.56 3.0 2.0 intron dpr8 + chrX_8_14320001 chrX_14320001 0.50 RAL-584_95b 541 chrX 14523613 14523702 Tabor 6864 478 14 89 '3-11 59.48 4.8 2.4 intergenic not near genes chrX_14_14520001 chrX_14520001 0.21 RAL-584_95b 542 chrX 14613756 14613872 297 6580 387 11 116 '3-8 70.46 5.9 1.6 intron NetA - chrX_11_14610001 chrX_14610001 0.27 RAL-584_95b 543 chrX 14827573 14827613 G2 3025 3049 12 40 '6-6 62.59 10.9 1.0 3` UTR CG14408 - chrX_12_14825001 chrX_14825001 0.50 RAL-584_95b 544 chrX 14951694 14951737 jockey 4764 4762 9 43 '4-5 64.39 6.3 1.2 intron pdgy - chrX_9_14950001 chrX_14950001 0.44 RAL-584_95b 545 chrX 15118084 15118114 I-element 5344 5315 11 30 '3-8 61.22 5.4 1.7 intergenic not near genes chrX_11_15115001 chrX_15115001 0.27 RAL-584_95b 546 chrX 15137373 15137401 jockey 14 12 5 28 '2-3 52.62 9.3 0.5 intergenic drd +,RpL37a - chrX_5_15135001 chrX_15135001 0.40 RAL-584_95b 547 chrX 15224813 15224923 copia 4881 257 25 110 '17-8 63.46 7.9 2.8 intergenic not near genes chrX_25_15220001 chrX_15220001 0.68 RAL-584_95b 548 chrX 15841136 15841185 INE-1 143 148 8 49 '5-3 59.67 14.5 0.5 3` UTR CG8565 + chrX_8_15840001 chrX_15840001 0.62 RAL-584_95b 549 chrX 16542068 16542173 roo 8680 409 28 105 '16-12 63.99 6.4 3.8 intergenic CG9902 - chrX_28_16540001 chrX_16540001 0.57 RAL-584_95b 550 chrX 17163648 17163759 roo 407 8 37 111 '15-22 69.07 8.8 3.8 intron baz + chrX_37_17160001 chrX_17160001 0.41 RAL-584_95b 551 chrX 17391985 17392090 hopper 1408 1406 9 105 '6-3 65.53 6.7 1.2 intergenic not near genes chrX_9_17390001 chrX_17390001 0.67 RAL-584_95b 552 chrX 17587485 17587612 roo 8661 409 28 127 '12-16 66.93 7.3 3.4 intron CG12991 + chrX_28_17585001 chrX_17585001 0.43 RAL-584_95b 553 chrX 17741053 17741104 Dm88 4373 4374 4 51 '2-2 70.42 1.8 1.4 intron CG42684 + chrX_4_17740001 chrX_17740001 0.50 RAL-584_95b 554 chrX 18078793 18078891 opus 12 7489 14 98 '8-6 62.66 9.3 1.4 intergenic CG7536 -,Dhc16F + chrX_14_18075001 chrX_18075001 0.57 RAL-584_95b 555 chrX 18409539 18409589 jockey 59 8 10 50 '2-8 68.24 9.9 0.9 intron CG32549 - chrX_10_18405001 chrX_18405001 0.20 RAL-584_95b 556 chrX 18507008 18507118 P-element 2 2886 22 110 '8-14 52.40 9.0 2.2 intron Ggt-1 - chrX_22_18505001 chrX_18505001 0.36 RAL-584_95b 557 chrX 18752326 18752434 roo 400 4 33 108 '11-22 63.66 6.5 4.4 intergenic not near genes chrX_33_18750001 chrX_18750001 0.33 RAL-584_95b 558 chrX 19316732 19316808 FB 5 5 15 76 '8-7 61.46 9.8 1.4 intron out - chrX_15_19315001 chrX_19315001 0.53 RAL-584_95b 559 chrX 19367552 19367588 Ivk 5365 5369 12 36 '6-6 60.71 8.7 1.2 intron kek5 + chrX_12_19365001 chrX_19365001 0.50 RAL-584_95b 560 chrX 19410018 19410128 297 388 6587 26 110 '12-14 68.44 8.9 2.6 intron kek5 + chrX_26_19410001 chrX_19410001 0.46 RAL-584_95b 561 chrX 20050023 20050109 Stalker2 7640 7247 18 86 '12-6 64.42 4.9 3.1 intron Dop2R - chrX_18_20050001 chrX_20050001 0.67 RAL-584_95b 562 chrX 20134515 20134609 Burdock 6141 237 7 94 '5-2 60.01 8.1 0.8 intron CG15322 + chrX_7_20130001 chrX_20130001 0.71 RAL-584_95b 563 chrX 20149205 20149256 roo 391 410 8 51 '4-4 66.12 10.5 0.7 intron CG9572 + chrX_8_20145001 chrX_20145001 0.50 RAL-584_95b 564 chrX 20313948 20313994 jockey 4972 4988 8 46 '5-3 65.72 8.8 0.8 intron CG1504 - chrX_8_20310001 chrX_20310001 0.62 RAL-584_95b 565 chrX 20596617 20596734 297 6970 6581 27 117 '20-7 67.93 7.1 3.3 intron RunxA - chrX_27_20595001 chrX_20595001 0.74 RAL-584_95b 566 chrX 20867613 20867658 jockey 4678 4698 9 45 '3-6 58.92 5.6 1.4 intron shakB - chrX_9_20865001 chrX_20865001 0.33 RAL-584_95b 567 chrX 21087561 21087611 mdg3 5252 5288 7 50 '2-5 64.40 4.2 1.3 intergenic not near genes chrX_7_21085001 chrX_21085001 0.29 RAL-584_95b 568 chrX 21109594 21109704 Quasimodo 7361 3 9 110 '4-5 69.91 8.0 1.0 intron,intron CG11566 +,stg1 + chrX_9_21105001 chrX_21105001 0.44 RAL-584_95b 569 chrX 21257066 21257182 roo 8662 402 27 116 '15-12 67.51 8.5 2.8 intron CG32521 - chrX_27_21255001 chrX_21255001 0.56 RAL-584_95b 570 chrX 21270709 21270831 flea 4757 256 6 122 '1-5 69.77 6.4 0.8 intron CG32521 - chrX_6_21270001 chrX_21270001 0.17 RAL-584_95b 571 chrX 21322751 21322843 Juan 4204 4028 25 92 '9-16 64.87 8.8 2.6 intron Dd - chrX_25_21320001 chrX_21320001 0.36 RAL-584_95b 572 chrX 21508554 21508663 pogo 2 2098 17 109 '12-5 63.15 10.5 1.5 intron CR45082 - chrX_17_21505001 chrX_21505001 0.71 RAL-584_95b 573 chrX 21511448 21511561 gypsy5 7347 6 21 113 '12-9 62.63 5.4 3.3 intron CR45082 - chrX_21_21510001 chrX_21510001 0.57 RAL-584_95b 574 chrX 21667898 21667937 gypsy2 6510 18 13 39 '7-6 68.20 0.6 8.1 intergenic not near genes chrX_13_21665001 chrX_21665001 0.54 RAL-584_95b 575 chrX 21907812 21907838 accord 7225 7199 5 26 '4-1 67.99 0.0 5.0 intergenic not near genes chrX_5_21905001 chrX_21905001 0.80 RAL-584_95b 576 chrX 22252748 22252838 flea 4762 4988 7 90 '6-1 67.53 5.0 1.2 intergenic not near genes chrX_7_22250001 chrX_22250001 0.86 RAL-584_95b 577 chrX 22535233 22535345 pogo 11 2100 29 112 '14-15 67.55 8.2 3.2 intron,3` UTR,3` UTR CG17600 +,S6kII +,CG17598 - chrX_29_22535001 chrX_22535001 0.48 RAL-584_95b 578 chrX 22689392 22689422 mariner2 43 32 5 30 '3-2 52.66 3.6 1.1 intron CR44997 + chrX_5_22685001 chrX_22685001 0.60 RAL-584_95b 579 chrX 23009939 23010023 Stalker2 382 15 16 84 '7-9 61.64 9.1 1.6 exon FucTC - chrX_16_23005001 chrX_23005001 0.44 RAL-584_95b 580 chrX 23064981 23065104 Burdock 6135 255 27 123 '12-15 64.08 12.6 2.0 intergenic not near genes chrX_27_23060001 chrX_23060001 0.44 RAL-584_95b 581 chrX 23108294 23108329 BS3 1448 1413 11 35 '5-6 55.19 21.0 0.5 3` UTR ATbp + chrX_11_23105001 chrX_23105001 0.45 RAL-584_95b 582 chrY 864873 864919 accord 4 4 4 46 '2-2 65.62 19.3 0.2 intergenic not near genes chrY_4_860001 chrY_860001 0.50 RAL-584_95b 583 chrY 1642704 1642729 Stalker3T 203 202 4 25 '2-2 65.12 0.0 4.0 intron Ppr-Y + chrY_4_1640001 chrY_1640001 0.50 RAL-584_95b 584 chrY 2720343 2720374 Burdock 21 6138 7 31 '3-4 67.86 1.4 2.9 intergenic not near genes chrY_7_2720001 chrY_2720001 0.43 RAL-584_95b 585 chrY 3648864 3648907 Stalker2 215 223 12 43 '6-6 61.39 5.8 1.8 intergenic not near genes chrY_12_3645001 chrY_3645001 0.50 RAL-584_95b