SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 12977 13018 chr2L 13138 13179 13 165 46.0 32.0 39.0 0.3 202 chr2L 12977 intron l(2)gl - chr2L 13078 intron l(2)gl - chr2L 13179 intron l(2)gl - chr2L_13_10001 chr2L_10001 RAL-57 2 chr2L 47442 47456 chr2L 52572 52585 jockey 4 5130 2.5 2.0 2.2 1.2 5143 chr2L 47442 intron Cda5 - chr2L 50014 intron Cda5 - chr2L 52585 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-57 3 chr2L 263274 263302 chr2L 263445 263473 6 170 1.0 3.0 2.0 2.0 199 chr2L 263274 intron,3` UTR CG3645 -,CG17075 - chr2L 263374 intron,3` UTR CG3645 -,CG17075 - chr2L 263473 intron,3` UTR CG3645 -,CG17075 - chr2L_6_260001 chr2L_260001 RAL-57 4 chr2L 347878 347909 chr2L 355402 355434 blood 5 7525 1.5 0.5 1.0 2.5 7556 chr2L 347878 3` UTR Plc21C + chr2L 351656 intron Plc21C + chr2L 355434 3` UTR Plc21C + chr2L_5_350001 chr2L_350001 RAL-57 5 chr2L 407932 407970 chr2L 408038 408076 4 106 1.5 1.5 1.5 1.6 144 chr2L 407932 3` UTR RpI135 + chr2L 408004 intergenic AP-2alpha -,RpI135 + chr2L 408076 3` UTR AP-2alpha - chr2L_4_405001 chr2L_405001 RAL-57 6 chr2L 467340 467485 chr2L 467464 467599 40 118 1.5 1.5 1.5 16.0 259 chr2L 467340 intron CG4297 - chr2L 467470 intron CG4297 - chr2L 467599 intron CG4297 - chr2L_40_465001 chr2L_465001 RAL-57 7 chr2L 617335 617344 chr2L 617437 617446 4 102 4.5 0.0 2.2 1.2 111 chr2L 617335 intergenic not near genes chr2L 617390 intergenic not near genes chr2L 617446 intergenic not near genes chr2L_4_615001 chr2L_615001 RAL-57 8 chr2L 686913 686952 chr2L 695978 696017 roo 4 9064 3.0 3.0 3.0 1.0 9104 chr2L 686913 intron ds - chr2L 691465 intron ds - chr2L 696017 intron ds - chr2L_4_690001 chr2L_690001 RAL-57 9 chr2L 763574 763608 chr2L 763675 763709 13 98 3.0 2.5 2.8 3.4 135 chr2L 763574 intergenic not near genes chr2L 763642 intergenic not near genes chr2L 763709 intergenic not near genes chr2L_13_760001 chr2L_760001 RAL-57 10 chr2L 769639 769655 chr2L 769891 769915 5 258 3.5 3.0 3.2 1.2 276 chr2L 769639 intergenic not near genes chr2L 769777 intergenic not near genes chr2L 769915 intergenic not near genes chr2L_5_765001 chr2L_765001 RAL-57 11 chr2L 769661 769676 chr2L 769887 769935 5 249 3.0 3.0 3.0 1.2 274 chr2L 769661 intergenic not near genes chr2L 769798 intergenic not near genes chr2L 769935 intergenic not near genes chr2L_5_765001 chr2L_765001 RAL-57 12 chr2L 877825 877827 chr2L 877928 877933 5 104 32.0 9.5 20.8 0.2 108 chr2L 877825 3` UTR,exon CG15824 -,ninaA + chr2L 877879 3` UTR,intron CG15824 -,ninaA + chr2L 877933 3` UTR,intron CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-57 13 chr2L 877828 877879 chr2L 877925 877972 28 103 6.0 7.5 6.8 3.6 144 chr2L 877828 3` UTR,exon CG15824 -,ninaA + chr2L 877900 3` UTR,intron CG15824 -,ninaA + chr2L 877972 3` UTR,exon CG15824 -,ninaA + chr2L_28_875001 chr2L_875001 RAL-57 14 chr2L 903376 903436 chr2L 904654 904713 7 1267 5.0 0.5 2.8 1.8 1337 chr2L 903376 intergenic not near genes chr2L 904044 5` UTR CR45261 + chr2L 904713 intergenic CR45261 + chr2L_7_900001 chr2L_900001 RAL-57 15 chr2L 924568 924616 chr2L 924867 924912 8 298 5.0 1.0 3.0 2.0 344 chr2L 924568 intron CG4341 + chr2L 924740 intron CG4341 + chr2L 924912 intron CG4341 + chr2L_8_920001 chr2L_920001 RAL-57 16 chr2L 927848 927884 chr2L 928009 928037 7 165 3.0 6.0 4.5 1.3 189 chr2L 927848 intron CG4341 + chr2L 927942 intron CG4341 + chr2L 928037 intron CG4341 + chr2L_7_925001 chr2L_925001 RAL-57 17 chr2L 964551 964573 chr2L 964660 964682 9 109 0.0 8.0 4.0 1.8 131 chr2L 964551 intergenic not near genes chr2L 964616 intergenic not near genes chr2L 964682 intergenic not near genes chr2L_9_960001 chr2L_960001 RAL-57 18 chr2L 976853 976870 chr2L 984514 984531 roo 11 7661 8.5 0.0 4.2 2.1 7678 chr2L 976853 intergenic not near genes chr2L 980692 intergenic not near genes chr2L 984531 intergenic not near genes chr2L_11_980001 chr2L_980001 RAL-57 19 chr2L 1035534 1035593 chr2L 1035636 1035695 41 100 14.0 10.5 12.2 3.1 161 chr2L 1035534 intron IA-2 - chr2L 1035614 intron IA-2 - chr2L 1035695 intron IA-2 - chr2L_41_1035001 chr2L_1035001 RAL-57 20 chr2L 1042594 1042607 chr2L 1042695 1042709 9 102 6.0 0.0 3.0 2.2 115 chr2L 1042594 intron IA-2 - chr2L 1042652 intron IA-2 - chr2L 1042709 intron IA-2 - chr2L_9_1040001 chr2L_1040001 RAL-57 21 chr2L 1066071 1066103 chr2L 1066177 1066206 10 105 7.5 5.0 6.2 1.4 135 chr2L 1066071 intron S - chr2L 1066138 intron S - chr2L 1066206 intron S - chr2L_10_1065001 chr2L_1065001 RAL-57 22 chr2L 1066104 1066119 chr2L 1066176 1066225 4 98 6.5 5.0 5.8 0.6 121 chr2L 1066104 intron S - chr2L 1066164 intron S - chr2L 1066225 intron S - chr2L_4_1065001 chr2L_1065001 RAL-57 23 chr2L 1087261 1087285 chr2L 1087572 1087596 20 308 15.5 4.5 10.0 1.8 335 chr2L 1087261 intron CG4629 - chr2L 1087428 intron CG4629 - chr2L 1087596 intron CG4629 - chr2L_20_1085001 chr2L_1085001 RAL-57 24 chr2L 1087288 1087313 chr2L 1087570 1087623 13 283 4.5 4.0 4.2 2.5 335 chr2L 1087288 intron CG4629 - chr2L 1087456 intron CG4629 - chr2L 1087623 intron CG4629 - chr2L_13_1085001 chr2L_1085001 RAL-57 25 chr2L 1090365 1090379 chr2L 1090480 1090493 6 115 0.0 10.5 5.2 1.0 128 chr2L 1090365 intron CG4629 - chr2L 1090429 intron CG4629 - chr2L 1090493 intron CG4629 - chr2L_6_1090001 chr2L_1090001 RAL-57 26 chr2L 1199849 1199864 chr2L 1199982 1199997 12 133 6.0 19.5 12.8 0.9 148 chr2L 1199849 3` UTR CG43348 + chr2L 1199923 3` UTR CG43348 + chr2L 1199997 intergenic CG43348 +,CG43349 + chr2L_12_1195001 chr2L_1195001 RAL-57 27 chr2L 1220106 1220141 chr2L 1227597 1227631 blood 6 7490 8.5 2.0 5.2 1.0 7525 chr2L 1220106 intron CG42329 + chr2L 1223868 intron CG42329 + chr2L 1227631 intron CG42329 + chr2L_6_1220001 chr2L_1220001 RAL-57 28 chr2L 1237880 1237921 chr2L 1237982 1238023 17 102 3.5 5.5 4.5 3.1 143 chr2L 1237880 intergenic not near genes chr2L 1237952 intergenic not near genes chr2L 1238023 intergenic not near genes chr2L_17_1235001 chr2L_1235001 RAL-57 29 chr2L 1244392 1244431 chr2L 1244494 1244533 8 102 0.0 1.5 0.8 4.4 141 chr2L 1244392 intergenic not near genes chr2L 1244462 intergenic not near genes chr2L 1244533 intergenic not near genes chr2L_8_1240001 chr2L_1240001 RAL-57 30 chr2L 1312871 1312898 chr2L 1312955 1312977 5 92 1.0 3.0 2.0 1.7 106 chr2L 1312871 intergenic not near genes chr2L 1312924 intergenic not near genes chr2L 1312977 intergenic not near genes chr2L_5_1310001 chr2L_1310001 RAL-57 31 chr2L 1331090 1331094 chr2L 1331162 1331192 5 88 0.0 2.5 1.2 2.3 102 chr2L 1331090 intergenic not near genes chr2L 1331141 intergenic not near genes chr2L 1331192 intergenic not near genes chr2L_5_1330001 chr2L_1330001 RAL-57 32 chr2L 1570670 1570719 chr2L 1573567 1573616 F-element 4 2896 1.5 2.0 1.8 1.4 2946 chr2L 1570670 intron haf + chr2L 1572143 intron haf + chr2L 1573616 intron haf + chr2L_4_1570001 chr2L_1570001 RAL-57 33 chr2L 1711336 1711355 chr2L 1711685 1711704 mdg3 19 348 29.0 24.0 26.5 0.7 368 chr2L 1711336 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711520 3` UTR frtz - chr2L 1711704 3` UTR frtz - chr2L_19_1710001 chr2L_1710001 RAL-57 34 chr2L 1711359 1711387 chr2L 1711679 1711732 mdg3 25 342 13.0 19.0 16.0 1.5 373 chr2L 1711359 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711546 3` UTR frtz - chr2L 1711732 3` UTR frtz - chr2L_25_1710001 chr2L_1710001 RAL-57 35 chr2L 1721809 1721854 chr2L 1721911 1721961 8 102 0.5 7.5 4.0 1.6 152 chr2L 1721809 intron Rim2 - chr2L 1721885 intron Rim2 - chr2L 1721961 intron Rim2 - chr2L_8_1720001 chr2L_1720001 RAL-57 36 chr2L 1724788 1724832 chr2L 1724895 1724939 26 107 11.5 9.0 10.2 2.3 151 chr2L 1724788 3` UTR Eno - chr2L 1724864 3` UTR Eno - chr2L 1724939 3` UTR Eno - chr2L_26_1720001 chr2L_1720001 RAL-57 37 chr2L 1849308 1849342 chr2L 1849424 1849453 7 115 1.0 0.0 0.5 4.7 145 chr2L 1849308 intron wry + chr2L 1849380 intron wry + chr2L 1849453 intron wry + chr2L_7_1845001 chr2L_1845001 RAL-57 38 chr2L 1883391 1883446 chr2L 1884000 1884051 12 607 4.5 2.5 3.5 2.7 660 chr2L 1883391 intron CG15358 - chr2L 1883721 intron CG15358 - chr2L 1884051 exon CG15358 - chr2L_12_1880001 chr2L_1880001 RAL-57 39 chr2L 1948616 1948658 chr2L 1948748 1948792 14 132 0.0 5.5 2.8 3.7 176 chr2L 1948616 intergenic not near genes chr2L 1948704 intergenic not near genes chr2L 1948792 intergenic not near genes chr2L_14_1945001 chr2L_1945001 RAL-57 40 chr2L 1995646 1995706 chr2L 1995764 1995824 15 115 7.5 4.5 6.0 2.1 178 chr2L 1995646 intergenic not near genes chr2L 1995735 intergenic not near genes chr2L 1995824 intergenic not near genes chr2L_15_1995001 chr2L_1995001 RAL-57 41 chr2L 1999537 1999570 chr2L 1999726 1999754 6 188 11.0 5.0 8.0 0.7 217 chr2L 1999537 intron CG33543 - chr2L 1999646 intron CG33543 - chr2L 1999754 intron CG33543 - chr2L_6_1995001 chr2L_1995001 RAL-57 42 chr2L 1999572 1999579 chr2L 1999724 1999766 4 166 6.5 5.0 5.8 0.6 194 chr2L 1999572 intron CG33543 - chr2L 1999669 intron CG33543 - chr2L 1999766 intron CG33543 - chr2L_4_1995001 chr2L_1995001 RAL-57 43 chr2L 2002908 2002963 chr2L 2003083 2003111 37 169 6.5 9.5 8.0 4.1 203 chr2L 2002908 exon,intron CG33543 -,CR43464 + chr2L 2003010 intron,intron CG33543 -,CR43464 + chr2L 2003111 intron,intron CG33543 -,CR43464 + chr2L_37_2000001 chr2L_2000001 RAL-57 44 chr2L 2049199 2049228 chr2L 2049303 2049337 5 105 4.5 6.0 5.2 0.8 138 chr2L 2049199 intergenic not near genes chr2L 2049268 intergenic not near genes chr2L 2049337 intergenic not near genes chr2L_5_2045001 chr2L_2045001 RAL-57 45 chr2L 2049230 2049240 chr2L 2049302 2049349 8 104 1.0 6.0 3.5 1.8 119 chr2L 2049230 intergenic not near genes chr2L 2049290 intergenic not near genes chr2L 2049349 intergenic not near genes chr2L_8_2045001 chr2L_2045001 RAL-57 46 chr2L 2068781 2068840 chr2L 2068990 2069042 31 200 7.5 14.0 10.8 2.6 261 chr2L 2068781 intron dpr3 - chr2L 2068912 intron dpr3 - chr2L 2069042 intron dpr3 - chr2L_31_2065001 chr2L_2065001 RAL-57 47 chr2L 2112086 2112146 chr2L 2119773 2119776 opus 8 7672 1.0 3.0 2.0 2.7 7690 chr2L 2112086 intergenic not near genes chr2L 2115931 intergenic not near genes chr2L 2119776 intergenic not near genes chr2L_8_2115001 chr2L_2115001 RAL-57 48 chr2L 2160593 2160622 chr2L 2160708 2160737 20 115 12.0 12.0 12.0 1.5 144 chr2L 2160593 intron aop - chr2L 2160665 intron aop - chr2L 2160737 intron aop - chr2L_20_2160001 chr2L_2160001 RAL-57 49 chr2L 2294060 2294073 chr2L 2299246 2299303 copia 5 5211 3.0 4.0 3.5 1.1 5243 chr2L 2294060 intergenic not near genes chr2L 2296682 intergenic not near genes chr2L 2299303 intergenic not near genes chr2L_5_2295001 chr2L_2295001 RAL-57 50 chr2L 2311046 2311091 chr2L 2311166 2311212 17 120 4.5 4.5 4.5 3.1 166 chr2L 2311046 intron CG9967 - chr2L 2311129 intron CG9967 - chr2L 2311212 intron CG9967 - chr2L_17_2310001 chr2L_2310001 RAL-57 51 chr2L 2503710 2503736 chr2L 2504514 2504540 4 804 4.5 2.5 3.5 0.9 830 chr2L 2503710 intergenic not near genes chr2L 2504125 intergenic not near genes chr2L 2504540 intergenic not near genes chr2L_4_2500001 chr2L_2500001 RAL-57 52 chr2L 2548064 2548070 chr2L 2548195 2548201 5 131 4.0 2.5 3.2 1.2 137 chr2L 2548064 intergenic not near genes chr2L 2548132 intergenic not near genes chr2L 2548201 intergenic not near genes chr2L_5_2545001 chr2L_2545001 RAL-57 53 chr2L 2565529 2565559 chr2L 2571627 2571657 297 17 6097 8.5 10.0 9.2 1.7 6128 chr2L 2565529 exon Cyp309a2 - chr2L 2568593 intron Cyp309a2 - chr2L 2571657 exon Cyp309a2 - chr2L_17_2565001 chr2L_2565001 RAL-57 54 chr2L 2620596 2620652 chr2L 2620725 2620782 10 129 3.5 2.0 2.8 2.6 186 chr2L 2620596 3` UTR CG43403 + chr2L 2620689 3` UTR CG43403 + chr2L 2620782 3` UTR CG43403 + chr2L_10_2620001 chr2L_2620001 RAL-57 55 chr2L 2667612 2667642 chr2L 2667716 2667720 7 99 4.0 2.0 3.0 1.8 108 chr2L 2667612 intergenic not near genes chr2L 2667666 intergenic not near genes chr2L 2667720 intergenic not near genes chr2L_7_2665001 chr2L_2665001 RAL-57 56 chr2L 2703429 2703441 chr2L 2703532 2703550 5 108 2.5 11.0 6.8 0.6 121 chr2L 2703429 intron CG31690 + chr2L 2703490 intron CG31690 + chr2L 2703550 intron CG31690 + chr2L_5_2700001 chr2L_2700001 RAL-57 57 chr2L 2713496 2713544 chr2L 2713616 2713663 26 117 8.0 10.0 9.0 2.6 167 chr2L 2713496 intron CG31690 + chr2L 2713580 intron CG31690 + chr2L 2713663 intron CG31690 + chr2L_26_2710001 chr2L_2710001 RAL-57 58 chr2L 2724419 2724432 chr2L 2724520 2724532 4 101 1.0 3.0 2.0 1.3 113 chr2L 2724419 intergenic not near genes chr2L 2724476 intergenic not near genes chr2L 2724532 intergenic not near genes chr2L_4_2720001 chr2L_2720001 RAL-57 59 chr2L 2772591 2772625 chr2L 2779200 2779232 297 12 6608 7.0 8.0 7.5 1.4 6641 chr2L 2772591 3` UTR Syt1 - chr2L 2775912 intron Syt1 - chr2L 2779232 3` UTR Syt1 - chr2L_12_2775001 chr2L_2775001 RAL-57 60 chr2L 2800577 2800608 chr2L 2800685 2800716 17 108 9.0 0.0 4.5 3.1 139 chr2L 2800577 intergenic not near genes chr2L 2800646 intergenic not near genes chr2L 2800716 intergenic not near genes chr2L_17_2800001 chr2L_2800001 RAL-57 61 chr2L 2826530 2826573 chr2L 2826637 2826683 5 106 1.0 3.0 2.0 1.7 153 chr2L 2826530 intron Duox - chr2L 2826606 intron Duox - chr2L 2826683 intron Duox - chr2L_5_2825001 chr2L_2825001 RAL-57 62 chr2L 2933278 2933309 chr2L 2935478 2935511 pogo 4 2201 4.5 1.5 3.0 1.0 2233 chr2L 2933278 intron lilli + chr2L 2934394 intron lilli + chr2L 2935511 intron lilli + chr2L_4_2930001 chr2L_2930001 RAL-57 63 chr2L 3073010 3073051 chr2L 3078238 3078279 copia 12 5228 8.0 10.0 9.0 1.2 5269 chr2L 3073010 intron toc - chr2L 3075644 intron toc - chr2L 3078279 intron toc - chr2L_12_3075001 chr2L_3075001 RAL-57 64 chr2L 3108876 3108894 chr2L 3108978 3108996 4 102 0.0 2.0 1.0 2.0 120 chr2L 3108876 intron toc - chr2L 3108936 intron toc - chr2L 3108996 intron toc - chr2L_4_3105001 chr2L_3105001 RAL-57 65 chr2L 3134276 3134288 chr2L 3134377 3134389 5 101 1.0 5.5 3.2 1.2 113 chr2L 3134276 intron toc - chr2L 3134332 intron toc - chr2L 3134389 intron toc - chr2L_5_3130001 chr2L_3130001 RAL-57 66 chr2L 3134935 3134950 chr2L 3135037 3135052 5 102 3.5 3.0 3.2 1.2 117 chr2L 3134935 intron toc - chr2L 3134994 intron toc - chr2L 3135052 intron toc - chr2L_5_3130001 chr2L_3130001 RAL-57 67 chr2L 3192182 3192233 chr2L 3192318 3192342 28 129 12.5 13.5 13.0 2.0 160 chr2L 3192182 exon CG34393 - chr2L 3192262 intron CG34393 - chr2L 3192342 intron CG34393 - chr2L_28_3190001 chr2L_3190001 RAL-57 68 chr2L 3251489 3251521 chr2L 3259079 3259111 springer 7 7590 0.5 4.5 2.5 2.0 7622 chr2L 3251489 intergenic not near genes chr2L 3255300 intergenic not near genes chr2L 3259111 intergenic not near genes chr2L_7_3255001 chr2L_3255001 RAL-57 69 chr2L 3261487 3261504 chr2L 3261604 3261619 10 117 8.5 14.5 11.5 0.8 132 chr2L 3261487 intergenic CR45338 -,CR45337 - chr2L 3261553 intergenic CR45338 -,CR45337 - chr2L 3261619 intergenic CR45338 -,CR45337 - chr2L_10_3260001 chr2L_3260001 RAL-57 70 chr2L 3323231 3323284 chr2L 3323363 3323416 31 129 7.5 5.5 6.5 4.1 185 chr2L 3323231 intergenic CG8837 + chr2L 3323324 intergenic CG8837 + chr2L 3323416 intergenic CG8837 + chr2L_31_3320001 chr2L_3320001 RAL-57 71 chr2L 3482134 3482182 chr2L 3482249 3482297 22 114 3.5 6.5 5.0 3.7 163 chr2L 3482134 intron CG15414 - chr2L 3482216 intron CG15414 - chr2L 3482297 intron CG15414 - chr2L_22_3480001 chr2L_3480001 RAL-57 72 chr2L 3497814 3497871 chr2L 3497917 3497974 27 102 4.0 5.0 4.5 4.9 160 chr2L 3497814 intron tim - chr2L 3497894 intron tim - chr2L 3497974 intron tim - chr2L_27_3495001 chr2L_3495001 RAL-57 73 chr2L 3508325 3508373 chr2L 3508428 3508476 29 103 7.5 6.0 6.8 3.7 151 chr2L 3508325 intergenic tim -,CR45299 + chr2L 3508400 intergenic CR45299 +,tim - chr2L 3508476 intergenic CR45299 +,tim - chr2L_29_3505001 chr2L_3505001 RAL-57 74 chr2L 3611406 3611432 chr2L 3611510 3611519 4 100 3.0 0.0 1.5 1.6 113 chr2L 3611406 intergenic not near genes chr2L 3611462 intergenic not near genes chr2L 3611519 intergenic not near genes chr2L_4_3610001 chr2L_3610001 RAL-57 75 chr2L 3632241 3632256 chr2L 3632343 3632358 5 101 0.0 5.5 2.8 1.3 117 chr2L 3632241 intron for - chr2L 3632300 intron for - chr2L 3632358 intron for - chr2L_5_3630001 chr2L_3630001 RAL-57 76 chr2L 3663307 3663336 chr2L 3663409 3663440 9 104 3.5 3.5 3.5 2.0 133 chr2L 3663307 intron CG34340 + chr2L 3663374 intron CG34340 + chr2L 3663440 intron CG34340 + chr2L_9_3660001 chr2L_3660001 RAL-57 77 chr2L 3729144 3729199 chr2L 3729267 3729322 6 123 0.0 2.5 1.2 2.7 178 chr2L 3729144 3` UTR Shaw + chr2L 3729233 intergenic Shaw + chr2L 3729322 intergenic Shaw + chr2L_6_3725001 chr2L_3725001 RAL-57 78 chr2L 3819601 3819629 chr2L 3819701 3819730 6 101 0.0 2.0 1.0 3.0 129 chr2L 3819601 intergenic not near genes chr2L 3819666 intergenic not near genes chr2L 3819730 intergenic not near genes chr2L_6_3815001 chr2L_3815001 RAL-57 79 chr2L 3862408 3862522 chr2L 3862516 3862634 11 110 0.0 0.0 0.0 11.0 226 chr2L 3862408 intergenic CG3964 +,CR44078 - chr2L 3862521 intergenic CG3964 +,CR44078 - chr2L 3862634 intergenic CG3964 + chr2L_11_3860001 chr2L_3860001 RAL-57 80 chr2L 3883575 3883628 chr2L 3883753 3883798 32 177 7.0 7.5 7.2 3.9 223 chr2L 3883575 intron capu - chr2L 3883686 intron capu - chr2L 3883798 intron capu - chr2L_32_3880001 chr2L_3880001 RAL-57 81 chr2L 4150613 4150643 chr2L 4150704 4150746 6 98 1.5 3.0 2.2 1.9 133 chr2L 4150613 exon CG2955 + chr2L 4150680 exon CG2955 + chr2L 4150746 exon CG2955 + chr2L_6_4150001 chr2L_4150001 RAL-57 82 chr2L 4152252 4152252 chr2L 16217660 16217660 5 12065408 6.0 15.5 10.8 0.4 12065408 chr2L 4152252 intergenic not near genes chr2L 10184956 exon Sur - chr2L 16217660 intergenic not near genes chr2L_5_10180001 chr2L_10180001 RAL-57 83 chr2L 4184453 4184505 chr2L 4184797 4184849 6 344 0.5 0.0 0.2 5.0 396 chr2L 4184453 intergenic not near genes chr2L 4184651 intergenic not near genes chr2L 4184849 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-57 84 chr2L 4265475 4265524 chr2L 4265586 4265635 4 111 1.5 2.0 1.8 1.4 160 chr2L 4265475 intergenic not near genes chr2L 4265555 intergenic not near genes chr2L 4265635 intergenic not near genes chr2L_4_4265001 chr2L_4265001 RAL-57 85 chr2L 4351451 4351468 chr2L 4351552 4351569 7 101 8.0 0.0 4.0 1.4 118 chr2L 4351451 intergenic CR44700 + chr2L 4351510 intergenic CR44700 + chr2L 4351569 intergenic CR44700 + chr2L_7_4350001 chr2L_4350001 RAL-57 86 chr2L 4351491 4351501 chr2L 4351604 4351614 7 112 3.5 1.0 2.2 2.2 123 chr2L 4351491 intergenic CR44700 + chr2L 4351552 intergenic CR44700 + chr2L 4351614 intergenic CR44700 + chr2L_7_4350001 chr2L_4350001 RAL-57 87 chr2L 4438600 4438610 chr2L 4439058 4439068 4 458 0.0 4.0 2.0 1.3 468 chr2L 4438600 intron CG15431 - chr2L 4438834 intron CG15431 - chr2L 4439068 intron CG15431 - chr2L_4_4435001 chr2L_4435001 RAL-57 88 chr2L 4601688 4601734 chr2L 4609154 4609200 mdg1 12 7466 4.0 3.5 3.8 2.5 7512 chr2L 4601688 intron dp - chr2L 4605444 intron dp - chr2L 4609200 intron dp - chr2L_12_4605001 chr2L_4605001 RAL-57 89 chr2L 4661825 4661855 chr2L 4669430 4669460 opus 8 7605 3.0 4.0 3.5 1.8 7635 chr2L 4661825 intergenic not near genes chr2L 4665642 intergenic not near genes chr2L 4669460 intergenic not near genes chr2L_8_4665001 chr2L_4665001 RAL-57 90 chr2L 4701845 4701864 chr2L 4701997 4702008 5 153 1.0 2.5 1.8 1.8 163 chr2L 4701845 intron CG34351 + chr2L 4701926 intron CG34351 + chr2L 4702008 intron CG34351 + chr2L_5_4700001 chr2L_4700001 RAL-57 91 chr2L 4769103 4769140 chr2L 4769603 4769640 8 500 3.0 2.0 2.5 2.3 537 chr2L 4769103 intron CG15630 - chr2L 4769372 intron CG15630 - chr2L 4769640 intron CG15630 - chr2L_8_4765001 chr2L_4765001 RAL-57 92 chr2L 4793283 4793321 chr2L 4793603 4793641 7 320 8.0 2.5 5.2 1.1 358 chr2L 4793283 intron CG15630 - chr2L 4793462 intron CG15630 - chr2L 4793641 exon CG15630 - chr2L_7_4790001 chr2L_4790001 RAL-57 93 chr2L 4807645 4807690 chr2L 4807752 4807797 11 107 5.5 2.0 3.8 2.3 152 chr2L 4807645 intergenic not near genes chr2L 4807721 intergenic not near genes chr2L 4807797 intergenic not near genes chr2L_11_4805001 chr2L_4805001 RAL-57 94 chr2L 4819467 4819517 chr2L 4819615 4819653 11 146 3.0 4.0 3.5 2.4 186 chr2L 4819467 intergenic not near genes chr2L 4819560 intergenic not near genes chr2L 4819653 intergenic not near genes chr2L_11_4815001 chr2L_4815001 RAL-57 95 chr2L 4869442 4869499 chr2L 4869547 4869601 26 102 6.0 7.0 6.5 3.5 159 chr2L 4869442 intron pog + chr2L 4869522 intron pog + chr2L 4869601 intron pog + chr2L_26_4865001 chr2L_4865001 RAL-57 96 chr2L 4905065 4905118 chr2L 4905174 4905225 10 105 3.5 4.5 4.0 2.0 160 chr2L 4905065 intron CG2837 - chr2L 4905145 intron CG2837 - chr2L 4905225 intron CG2837 - chr2L_10_4905001 chr2L_4905001 RAL-57 97 chr2L 4918156 4918193 chr2L 4923254 4923291 jockey 9 5098 3.0 8.5 5.8 1.3 5135 chr2L 4918156 intron hoe1 - chr2L 4920724 intron hoe1 - chr2L 4923291 intron hoe1 - chr2L_9_4920001 chr2L_4920001 RAL-57 98 chr2L 4925648 4925695 chr2L 4925752 4925799 14 104 5.5 4.0 4.8 2.4 151 chr2L 4925648 intron hoe1 - chr2L 4925724 intron hoe1 - chr2L 4925799 intron hoe1 - chr2L_14_4925001 chr2L_4925001 RAL-57 99 chr2L 4953489 4953495 chr2L 4953755 4953761 pogo 5 266 26.5 6.5 16.5 0.3 272 chr2L 4953489 intergenic Jon25Bii - chr2L 4953625 intergenic Jon25Bii - chr2L 4953761 intergenic not near genes chr2L_5_4950001 chr2L_4950001 RAL-57 100 chr2L 4953497 4953539 chr2L 4953754 4953776 pogo 23 262 11.0 6.0 8.5 2.4 279 chr2L 4953497 intergenic Jon25Bii - chr2L 4953636 intergenic Jon25Bii - chr2L 4953776 intergenic not near genes chr2L_23_4950001 chr2L_4950001 RAL-57 101 chr2L 5021707 5021729 chr2L 5021802 5021830 9 99 6.5 5.0 5.8 1.3 123 chr2L 5021707 intron vkg - chr2L 5021768 intron vkg - chr2L 5021830 intron vkg - chr2L_9_5020001 chr2L_5020001 RAL-57 102 chr2L 5110981 5110983 chr2L 5111084 5111086 4 103 34.5 2.0 18.2 0.2 105 chr2L 5110981 intron Msp300 + chr2L 5111034 intron Msp300 + chr2L 5111086 intron Msp300 + chr2L_4_5110001 chr2L_5110001 RAL-57 103 chr2L 5117280 5117322 chr2L 5117387 5117429 5 107 2.0 3.0 2.5 1.4 149 chr2L 5117280 intron Msp300 + chr2L 5117354 intron Msp300 + chr2L 5117429 intron Msp300 + chr2L_5_5115001 chr2L_5115001 RAL-57 104 chr2L 5242881 5242937 chr2L 16217660 16217660 13 10974732 11.5 15.5 13.5 0.9 10974779 chr2L 5242881 intron tkv - chr2L 10730270 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_13_10730001 chr2L_10730001 RAL-57 105 chr2L 5342760 5342766 chr2L 5345165 5345171 Doc 4 2405 8.0 5.0 6.5 0.5 2411 chr2L 5342760 intergenic not near genes chr2L 5343966 intergenic not near genes chr2L 5345171 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-57 106 chr2L 5342767 5342797 chr2L 5345161 5345200 Doc 11 2403 4.5 5.0 4.8 1.9 2433 chr2L 5342767 intergenic not near genes chr2L 5343984 intergenic not near genes chr2L 5345200 intergenic not near genes chr2L_11_5340001 chr2L_5340001 RAL-57 107 chr2L 5503196 5503215 chr2L 5503433 5503452 4 237 2.0 1.5 1.8 1.4 256 chr2L 5503196 intergenic not near genes chr2L 5503324 intergenic not near genes chr2L 5503452 intergenic not near genes chr2L_4_5500001 chr2L_5500001 RAL-57 108 chr2L 5503228 5503242 chr2L 5503432 5503479 4 229 1.0 1.5 1.2 1.8 251 chr2L 5503228 intergenic not near genes chr2L 5503354 intergenic not near genes chr2L 5503479 intergenic not near genes chr2L_4_5500001 chr2L_5500001 RAL-57 109 chr2L 5550108 5550139 chr2L 5550192 5550201 27 79 4.0 0.0 2.0 9.0 93 chr2L 5550108 exon CG14014 - chr2L 5550154 exon CG14014 - chr2L 5550201 exon CG14014 - chr2L_27_5550001 chr2L_5550001 RAL-57 110 chr2L 5640049 5640094 chr2L 5640251 5640298 5 205 23.0 21.5 22.2 0.2 249 chr2L 5640049 intron CG31646 - chr2L 5640174 intron CG31646 - chr2L 5640298 exon CG31646 - chr2L_5_5640001 chr2L_5640001 RAL-57 111 chr2L 5665978 5666007 chr2L 5666602 5666654 11 643 4.0 1.5 2.8 2.9 676 chr2L 5665978 intron Hsp60C + chr2L 5666316 intron Hsp60C + chr2L 5666654 intron Hsp60C + chr2L_11_5665001 chr2L_5665001 RAL-57 112 chr2L 5695844 5695892 chr2L 5695961 5696008 8 117 1.5 1.0 1.2 3.6 164 chr2L 5695844 intergenic not near genes chr2L 5695926 intergenic not near genes chr2L 5696008 intergenic not near genes chr2L_8_5695001 chr2L_5695001 RAL-57 113 chr2L 5805928 5805950 chr2L 5806170 5806192 13 242 11.0 5.0 8.0 1.4 264 chr2L 5805928 intron CG11034 + chr2L 5806060 intron CG11034 + chr2L 5806192 intron CG11034 + chr2L_13_5805001 chr2L_5805001 RAL-57 114 chr2L 5814681 5814702 chr2L 5814789 5814810 6 108 1.0 0.5 0.8 3.3 129 chr2L 5814681 intergenic not near genes chr2L 5814746 intergenic not near genes chr2L 5814810 intergenic not near genes chr2L_6_5810001 chr2L_5810001 RAL-57 115 chr2L 5819659 5819699 chr2L 5819768 5819808 5 109 2.5 3.5 3.0 1.2 149 chr2L 5819659 intergenic not near genes chr2L 5819734 intergenic not near genes chr2L 5819808 intergenic not near genes chr2L_5_5815001 chr2L_5815001 RAL-57 116 chr2L 5825047 5825101 chr2L 5825157 5825220 18 118 5.0 0.0 2.5 5.1 173 chr2L 5825047 5` UTR TrissinR + chr2L 5825134 5` UTR TrissinR + chr2L 5825220 5` UTR TrissinR + chr2L_18_5825001 chr2L_5825001 RAL-57 117 chr2L 5827701 5827729 chr2L 5836734 5836749 roo 7 9030 4.0 2.5 3.2 1.7 9048 chr2L 5827701 intron TrissinR + chr2L 5832225 intron TrissinR + chr2L 5836749 intron TrissinR + chr2L_7_5830001 chr2L_5830001 RAL-57 118 chr2L 5840934 5840983 chr2L 5841037 5841085 13 100 0.5 2.5 1.5 5.2 151 chr2L 5840934 intron TrissinR + chr2L 5841010 intron TrissinR + chr2L 5841085 intron TrissinR + chr2L_13_5840001 chr2L_5840001 RAL-57 119 chr2L 5900241 5900289 chr2L 5900358 5900405 6 115 3.5 5.0 4.2 1.2 164 chr2L 5900241 3` UTR CR44579 - chr2L 5900323 3` UTR CR44579 - chr2L 5900405 intergenic CR44579 - chr2L_6_5900001 chr2L_5900001 RAL-57 120 chr2L 5904437 5904466 chr2L 5904541 5904571 21 105 15.5 0.0 7.8 2.4 134 chr2L 5904437 exon CG9021 - chr2L 5904504 intron CG9021 - chr2L 5904571 intron CG9021 - chr2L_21_5900001 chr2L_5900001 RAL-57 121 chr2L 5922907 5922914 chr2L 5923011 5923018 8 104 10.5 24.5 17.5 0.4 111 chr2L 5922907 3` UTR CG9016 - chr2L 5922962 3` UTR CG9016 - chr2L 5923018 3` UTR CG9016 - chr2L_8_5920001 chr2L_5920001 RAL-57 122 chr2L 5926242 5926451 chr2L 5926346 5926564 6 131 0.0 0.0 0.0 6.0 322 chr2L 5926242 intron dsf + chr2L 5926403 intron dsf + chr2L 5926564 intron dsf + chr2L_6_5925001 chr2L_5925001 RAL-57 123 chr2L 5931299 5931304 chr2L 5931436 5931441 4 137 5.5 6.5 6.0 0.6 142 chr2L 5931299 intron dsf + chr2L 5931370 intron dsf + chr2L 5931441 intron dsf + chr2L_4_5930001 chr2L_5930001 RAL-57 124 chr2L 5944551 5944588 chr2L 5948968 5949005 24 4418 103.5 47.0 75.2 0.3 4454 chr2L 5944551 intron Gpdh + chr2L 5946778 intron Gpdh + chr2L 5949005 intergenic Gpdh +,CG9044 + chr2L_24_5945001 chr2L_5945001 RAL-57 125 chr2L 5962242 5962303 chr2L 5962343 5962404 25 101 9.0 10.5 9.8 2.3 162 chr2L 5962242 intergenic not near genes chr2L 5962323 intergenic not near genes chr2L 5962404 intergenic not near genes chr2L_25_5960001 chr2L_5960001 RAL-57 126 chr2L 5963575 5963578 chr2L 5963618 5963643 4 53 38.5 39.5 39.0 0.1 68 chr2L 5963575 exon psd - chr2L 5963609 exon psd - chr2L 5963643 exon psd - chr2L_4_5960001 chr2L_5960001 RAL-57 127 chr2L 6002420 6002468 chr2L 6002530 6002579 21 111 4.5 7.0 5.8 3.1 159 chr2L 6002420 3` UTR Tsp26A + chr2L 6002500 3` UTR Tsp26A + chr2L 6002579 3` UTR Tsp26A + chr2L_21_6000001 chr2L_6000001 RAL-57 128 chr2L 6053208 6053255 chr2L 6053450 6053502 23 243 8.0 7.5 7.8 2.6 294 chr2L 6053208 exon CG9135 + chr2L 6053355 3` UTR CG9135 + chr2L 6053502 3` UTR CG9135 + chr2L_23_6050001 chr2L_6050001 RAL-57 129 chr2L 6075064 6075068 chr2L 6075181 6075185 4 117 4.5 0.0 2.2 1.2 121 chr2L 6075064 intergenic CR43801 - chr2L 6075124 intergenic CR43801 - chr2L 6075185 intergenic CR43801 - chr2L_4_6075001 chr2L_6075001 RAL-57 130 chr2L 6262013 6262042 chr2L 6262113 6262157 4 110 1.5 1.5 1.5 1.6 144 chr2L 6262013 intron Ddr + chr2L 6262085 intron Ddr + chr2L 6262157 intron Ddr + chr2L_4_6260001 chr2L_6260001 RAL-57 131 chr2L 6279633 6279644 chr2L 6279737 6279748 INE-1 4 104 5.5 1.0 3.2 1.0 115 chr2L 6279633 intron Ddr + chr2L 6279690 intron Ddr + chr2L 6279748 intron Ddr + chr2L_4_6275001 chr2L_6275001 RAL-57 132 chr2L 6282028 6282068 chr2L 6282132 6282173 14 104 4.5 5.0 4.8 2.4 145 chr2L 6282028 intron Ddr + chr2L 6282100 intron Ddr + chr2L 6282173 intron Ddr + chr2L_14_6280001 chr2L_6280001 RAL-57 133 chr2L 6296145 6296161 chr2L 6296217 6296247 8 87 4.5 3.5 4.0 1.6 102 chr2L 6296145 intron Ddr + chr2L 6296196 intron Ddr + chr2L 6296247 intron Ddr + chr2L_8_6295001 chr2L_6295001 RAL-57 134 chr2L 6343666 6343697 chr2L 6343956 6343986 24 291 105.5 84.5 95.0 0.2 320 chr2L 6343666 intron Cpr + chr2L 6343826 intron Cpr + chr2L 6343986 intron Cpr + chr2L_24_6340001 chr2L_6340001 RAL-57 135 chr2L 6349053 6349074 chr2L 6349156 6349177 10 103 5.5 5.0 5.2 1.6 124 chr2L 6349053 intergenic CG9498 - chr2L 6349115 intergenic CG9498 - chr2L 6349177 intergenic CG9498 - chr2L_10_6345001 chr2L_6345001 RAL-57 136 chr2L 6363135 6363181 chr2L 6366082 6366123 Burdock 11 2946 9.0 5.0 7.0 1.4 2988 chr2L 6363135 intergenic not near genes chr2L 6364629 intergenic not near genes chr2L 6366123 intergenic not near genes chr2L_11_6360001 chr2L_6360001 RAL-57 137 chr2L 6426835 6426885 chr2L 6445120 6445154 roo 26 18284 7.0 10.5 8.8 2.7 18319 chr2L 6426835 3` UTR CG9527 - chr2L 6435994 intron CG9527 - chr2L 6445154 exon CG9527 - chr2L_26_6435001 chr2L_6435001 RAL-57 138 chr2L 6483775 6483808 chr2L 6483883 6483886 8 97 8.0 22.0 15.0 0.5 111 chr2L 6483775 exon DLP + chr2L 6483830 exon DLP + chr2L 6483886 exon DLP + chr2L_8_6480001 chr2L_6480001 RAL-57 139 chr2L 6527231 6527239 chr2L 6527335 6527343 5 104 6.0 7.5 6.8 0.6 112 chr2L 6527231 intergenic eya -,CG31637 + chr2L 6527287 intergenic eya -,CG31637 + chr2L 6527343 intergenic eya -,CG31637 + chr2L_5_6525001 chr2L_6525001 RAL-57 140 chr2L 6544348 6544394 chr2L 6544465 6544508 19 116 3.5 3.0 3.2 4.5 160 chr2L 6544348 intron eya - chr2L 6544428 intron eya - chr2L 6544508 intron eya - chr2L_19_6540001 chr2L_6540001 RAL-57 141 chr2L 6715728 6715775 chr2L 6715838 6715885 10 110 5.5 4.5 5.0 1.7 157 chr2L 6715728 intron AkhR - chr2L 6715806 intron AkhR - chr2L 6715885 intron AkhR - chr2L_10_6715001 chr2L_6715001 RAL-57 142 chr2L 6740743 6740755 chr2L 6740854 6740863 9 111 0.0 41.5 20.8 0.4 120 chr2L 6740743 intergenic not near genes chr2L 6740803 intergenic not near genes chr2L 6740863 intergenic not near genes chr2L_9_6740001 chr2L_6740001 RAL-57 143 chr2L 6771985 6772021 chr2L 6772071 6772077 9 82 11.0 7.5 9.2 0.9 92 chr2L 6771985 intron CG11321 - chr2L 6772031 intron CG11321 - chr2L 6772077 intron CG11321 - chr2L_9_6770001 chr2L_6770001 RAL-57 144 chr2L 6772574 6772581 chr2L 6772682 6772689 5 107 16.5 15.0 15.8 0.3 115 chr2L 6772574 5` UTR CG11321 - chr2L 6772632 5` UTR CG11321 - chr2L 6772689 5` UTR CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-57 145 chr2L 6799513 6799570 chr2L 6799625 6799681 18 111 3.0 4.0 3.5 4.0 168 chr2L 6799513 5` UTR CR43610 + chr2L 6799597 5` UTR CR43610 + chr2L 6799681 intergenic CR43610 +,CG17376 - chr2L_18_6795001 chr2L_6795001 RAL-57 146 chr2L 6818103 6818135 chr2L 6818217 6818247 6 113 5.0 11.0 8.0 0.7 144 chr2L 6818103 intergenic not near genes chr2L 6818175 intergenic not near genes chr2L 6818247 intergenic not near genes chr2L_6_6815001 chr2L_6815001 RAL-57 147 chr2L 6833366 6833418 chr2L 6833475 6833511 23 103 8.0 6.0 7.0 2.9 145 chr2L 6833366 intron sens-2 + chr2L 6833438 intron sens-2 + chr2L 6833511 intron sens-2 + chr2L_23_6830001 chr2L_6830001 RAL-57 148 chr2L 6850377 6850409 chr2L 6850468 6850516 9 106 5.5 3.0 4.2 1.7 139 chr2L 6850377 intergenic not near genes chr2L 6850446 intergenic not near genes chr2L 6850516 intergenic not near genes chr2L_9_6850001 chr2L_6850001 RAL-57 149 chr2L 6876784 6876810 chr2L 6882967 6883024 diver 6 6194 6.5 4.0 5.2 1.0 6240 chr2L 6876784 intron Nlg2 + chr2L 6879904 intron Nlg2 + chr2L 6883024 intron Nlg2 + chr2L_6_6875001 chr2L_6875001 RAL-57 150 chr2L 6968456 6968507 chr2L 6968643 6968693 28 187 7.5 8.0 7.8 3.2 237 chr2L 6968456 intergenic snRNP-U1-70K - chr2L 6968574 intergenic snRNP-U1-70K - chr2L 6968693 intergenic snRNP-U1-70K - chr2L_28_6965001 chr2L_6965001 RAL-57 151 chr2L 6972229 6972265 chr2L 6972659 6972696 4 432 0.0 3.5 1.8 1.4 467 chr2L 6972229 intergenic snRNP-U1-70K - chr2L 6972462 intergenic uif - chr2L 6972696 intergenic uif - chr2L_4_6970001 chr2L_6970001 RAL-57 152 chr2L 7023188 7023215 chr2L 7023399 7023427 10 209 17.0 9.0 13.0 0.7 239 chr2L 7023188 intron ade3 - chr2L 7023308 intron ade3 - chr2L 7023427 intron ade3 - chr2L_10_7020001 chr2L_7020001 RAL-57 153 chr2L 7023216 7023218 chr2L 7023398 7023428 5 201 16.0 9.0 12.5 0.4 212 chr2L 7023216 intron ade3 - chr2L 7023322 intron ade3 - chr2L 7023428 intron ade3 - chr2L_5_7020001 chr2L_7020001 RAL-57 154 chr2L 7023219 7023239 chr2L 7023393 7023450 15 205 9.0 7.5 8.2 1.6 231 chr2L 7023219 intron ade3 - chr2L 7023334 intron ade3 - chr2L 7023450 intron ade3 - chr2L_15_7020001 chr2L_7020001 RAL-57 155 chr2L 7100956 7101015 chr2L 7101207 7101266 10 250 2.5 3.0 2.8 2.6 310 chr2L 7100956 intron Pvf3 - chr2L 7101111 intron Pvf3 - chr2L 7101266 intron Pvf3 - chr2L_10_7100001 chr2L_7100001 RAL-57 156 chr2L 7111731 7111763 chr2L 7111842 7111873 7 110 6.5 0.0 3.2 1.7 142 chr2L 7111731 intron Pvf3 - chr2L 7111802 intron Pvf3 - chr2L 7111873 intron Pvf3 - chr2L_7_7110001 chr2L_7110001 RAL-57 157 chr2L 7126836 7126875 chr2L 7126940 7126979 6 102 3.0 0.0 1.5 2.4 143 chr2L 7126836 intron Pvf3 - chr2L 7126908 intron Pvf3 - chr2L 7126979 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-57 158 chr2L 7217213 7217259 chr2L 7217341 7217389 5 128 0.5 1.0 0.8 2.8 176 chr2L 7217213 intron CG13784 - chr2L 7217301 intron CG13784 - chr2L 7217389 intron CG13784 - chr2L_5_7215001 chr2L_7215001 RAL-57 159 chr2L 7218377 7218430 chr2L 7218478 7218533 8 103 3.5 2.0 2.8 2.1 156 chr2L 7218377 intron CG13784 - chr2L 7218455 intron CG13784 - chr2L 7218533 intron CG13784 - chr2L_8_7215001 chr2L_7215001 RAL-57 160 chr2L 7268450 7268473 chr2L 7268555 7268578 6 105 0.0 8.0 4.0 1.2 128 chr2L 7268450 intron Wnt4 - chr2L 7268514 intron Wnt4 - chr2L 7268578 intron Wnt4 - chr2L_6_7265001 chr2L_7265001 RAL-57 161 chr2L 7343302 7343358 chr2L 7350443 7350493 roo 21 7137 7.0 7.5 7.2 2.6 7191 chr2L 7343302 intron Wnt6 + chr2L 7346898 intron Wnt6 + chr2L 7350493 intron Wnt6 + chr2L_21_7345001 chr2L_7345001 RAL-57 162 chr2L 7405758 7405808 chr2L 7405861 7405913 5 105 2.0 0.0 1.0 2.5 155 chr2L 7405758 exon CG5177 + chr2L 7405836 intron CG5177 + chr2L 7405913 intron CG5177 + chr2L_5_7405001 chr2L_7405001 RAL-57 163 chr2L 7436200 7436220 chr2L 7436305 7436333 7 112 1.5 3.0 2.2 2.2 133 chr2L 7436200 intergenic not near genes chr2L 7436266 intergenic not near genes chr2L 7436333 intergenic not near genes chr2L_7_7435001 chr2L_7435001 RAL-57 164 chr2L 7493386 7493421 chr2L 7493496 7493532 4 110 0.0 2.5 1.2 1.8 146 chr2L 7493386 intron Ziz - chr2L 7493459 intron Ziz - chr2L 7493532 intron Ziz - chr2L_4_7490001 chr2L_7490001 RAL-57 165 chr2L 7513760 7513784 chr2L 7513862 7513886 4 102 2.0 1.0 1.5 1.6 126 chr2L 7513760 intron RapGAP1 - chr2L 7513823 intron RapGAP1 - chr2L 7513886 intron RapGAP1 - chr2L_4_7510001 chr2L_7510001 RAL-57 166 chr2L 7517774 7517802 chr2L 7517890 7517918 5 116 5.0 0.0 2.5 1.4 144 chr2L 7517774 intron RapGAP1 - chr2L 7517846 intron RapGAP1 - chr2L 7517918 intron RapGAP1 - chr2L_5_7515001 chr2L_7515001 RAL-57 167 chr2L 7573068 7573073 chr2L 8305633 8305674 4 732591 10.5 6.5 8.5 0.4 732606 chr2L 7573068 intron RapGAP1 - chr2L 7939371 intron Snoo - chr2L 8305674 5` UTR CG7840 + chr2L_4_7935001 chr2L_7935001 RAL-57 168 chr2L 7579863 7579914 chr2L 7579970 7580021 11 106 1.0 0.5 0.8 6.1 158 chr2L 7579863 intergenic not near genes chr2L 7579942 intergenic not near genes chr2L 7580021 intergenic not near genes chr2L_11_7575001 chr2L_7575001 RAL-57 169 chr2L 7922716 7922764 chr2L 7922822 7922870 21 106 9.5 9.5 9.5 2.0 154 chr2L 7922716 intron Snoo - chr2L 7922793 intron Snoo - chr2L 7922870 intron Snoo - chr2L_21_7920001 chr2L_7920001 RAL-57 170 chr2L 7959027 7959072 chr2L 7960462 7960510 pogo 8 1436 3.0 0.5 1.8 2.9 1483 chr2L 7959027 intron Snoo - chr2L 7959768 intron Snoo - chr2L 7960510 intron Snoo - chr2L_8_7955001 chr2L_7955001 RAL-57 171 chr2L 7977064 7977113 chr2L 7984065 7984097 297 19 6998 5.5 5.5 5.5 2.9 7033 chr2L 7977064 intron Snoo - chr2L 7980580 intron Snoo - chr2L 7984097 intron,5` UTR Snoo -,CG7231 + chr2L_19_7980001 chr2L_7980001 RAL-57 172 chr2L 8003003 8003005 chr2L 8003110 8003112 4 107 16.5 0.0 8.2 0.4 109 chr2L 8003003 intron Wwox - chr2L 8003058 intron Wwox - chr2L 8003112 intron Wwox - chr2L_4_8000001 chr2L_8000001 RAL-57 173 chr2L 8013594 8013603 chr2L 8018823 8018832 copia 4 5229 10.0 0.0 5.0 0.7 5238 chr2L 8013594 intron Tg + chr2L 8016213 intron Tg + chr2L 8018832 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-57 174 chr2L 8032613 8032620 chr2L 8032725 8032725 5 111 22.0 0.0 11.0 0.4 112 chr2L 8032613 intron,exon CG7367 -,Cka + chr2L 8032669 intron,intron CG7367 -,Cka + chr2L 8032725 intron,intron CG7367 -,Cka + chr2L_5_8030001 chr2L_8030001 RAL-57 175 chr2L 8044070 8044130 chr2L 8044174 8044234 45 102 10.0 13.0 11.5 3.6 164 chr2L 8044070 exon CG7466 + chr2L 8044152 intron CG7466 + chr2L 8044234 intron CG7466 + chr2L_45_8040001 chr2L_8040001 RAL-57 176 chr2L 8164577 8164608 chr2L 8164684 8164715 8 106 2.0 2.0 2.0 2.7 138 chr2L 8164577 intron Piezo + chr2L 8164646 intron Piezo + chr2L 8164715 intron Piezo + chr2L_8_8160001 chr2L_8160001 RAL-57 177 chr2L 8171276 8171299 chr2L 8171382 8171405 7 106 0.0 12.5 6.2 1.0 129 chr2L 8171276 intron Piezo + chr2L 8171340 intron Piezo + chr2L 8171405 intron Piezo + chr2L_7_8170001 chr2L_8170001 RAL-57 178 chr2L 8230297 8230304 chr2L 8230406 8230413 4 109 4.5 2.0 3.2 1.0 116 chr2L 8230297 5` UTR Pvr - chr2L 8230355 intron Pvr - chr2L 8230413 intron Pvr - chr2L_4_8230001 chr2L_8230001 RAL-57 179 chr2L 8244706 8244749 chr2L 8244853 8244896 15 145 1.5 5.0 3.2 3.6 190 chr2L 8244706 intron CG8086 - chr2L 8244801 intron CG8086 - chr2L 8244896 intron CG8086 - chr2L_15_8240001 chr2L_8240001 RAL-57 180 chr2L 8268436 8268462 chr2L 8268544 8268570 4 106 1.5 1.0 1.2 1.8 134 chr2L 8268436 intron Btk29A - chr2L 8268503 intron Btk29A - chr2L 8268570 intron Btk29A - chr2L_4_8265001 chr2L_8265001 RAL-57 181 chr2L 8286271 8286319 chr2L 8286383 8286431 12 110 2.0 3.5 2.8 3.2 160 chr2L 8286271 intron Btk29A - chr2L 8286351 intron Btk29A - chr2L 8286431 intron Btk29A - chr2L_12_8285001 chr2L_8285001 RAL-57 182 chr2L 8336932 8336943 chr2L 8337020 8337045 4 100 1.0 2.5 1.8 1.4 113 chr2L 8336932 intergenic not near genes chr2L 8336988 intergenic not near genes chr2L 8337045 intergenic not near genes chr2L_4_8335001 chr2L_8335001 RAL-57 183 chr2L 8418128 8418177 chr2L 8418252 8418301 20 119 2.0 10.5 6.2 2.8 173 chr2L 8418128 intron Akap200 + chr2L 8418214 intron Akap200 + chr2L 8418301 intron Akap200 + chr2L_20_8415001 chr2L_8415001 RAL-57 184 chr2L 8452404 8452432 chr2L 8461600 8461626 roo 8 9196 4.5 4.0 4.2 1.5 9222 chr2L 8452404 intron fu12 - chr2L 8457015 intron fu12 - chr2L 8461626 intron fu12 - chr2L_8_8455001 chr2L_8455001 RAL-57 185 chr2L 8466430 8466483 chr2L 8466537 8466590 13 105 2.0 1.0 1.5 5.2 160 chr2L 8466430 3` UTR fu2 + chr2L 8466510 3` UTR fu2 + chr2L 8466590 3` UTR fu2 + chr2L_13_8465001 chr2L_8465001 RAL-57 186 chr2L 8535053 8535078 chr2L 8535181 8535204 4 128 1.0 3.5 2.2 1.2 151 chr2L 8535053 intron CG17834 + chr2L 8535128 intron CG17834 + chr2L 8535204 intron CG17834 + chr2L_4_8535001 chr2L_8535001 RAL-57 187 chr2L 8578452 8578452 chr2L 16071771 16071771 5 7493319 8.5 10.5 9.5 0.5 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_5_12325001 chr2L_12325001 RAL-57 188 chr2L 8578452 8578452 chr2L 16217660 16217660 4 7639208 8.5 15.5 12.0 0.3 7639208 chr2L 8578452 intron Sema-1a + chr2L 12398056 intergenic Pkd2 + chr2L 16217660 intergenic not near genes chr2L_4_12395001 chr2L_12395001 RAL-57 189 chr2L 8580165 8580212 chr2L 8580271 8580318 5 106 0.5 1.5 1.0 2.5 153 chr2L 8580165 intron Sema-1a + chr2L 8580242 intron Sema-1a + chr2L 8580318 intron Sema-1a + chr2L_5_8580001 chr2L_8580001 RAL-57 190 chr2L 8588884 8588927 chr2L 8589000 8589043 7 115 2.0 2.5 2.2 2.2 159 chr2L 8588884 intron Sema-1a + chr2L 8588964 intron Sema-1a + chr2L 8589043 intron Sema-1a + chr2L_7_8585001 chr2L_8585001 RAL-57 191 chr2L 8603482 8603508 chr2L 8603640 8603666 8 158 5.5 2.0 3.8 1.7 184 chr2L 8603482 intron Sema-1a + chr2L 8603574 intron Sema-1a + chr2L 8603666 intron Sema-1a + chr2L_8_8600001 chr2L_8600001 RAL-57 192 chr2L 8612835 8612866 chr2L 8612937 8612966 6 101 2.5 4.5 3.5 1.3 131 chr2L 8612835 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612966 intron Sema-1a + chr2L_6_8610001 chr2L_8610001 RAL-57 193 chr2L 8723099 8723148 chr2L 8731501 8731534 Tirant 8 8398 0.5 3.0 1.8 2.9 8435 chr2L 8723099 intron raw - chr2L 8727316 intron raw - chr2L 8731534 intron raw - chr2L_8_8725001 chr2L_8725001 RAL-57 194 chr2L 8736241 8736258 chr2L 8736346 8736363 7 104 2.0 4.5 3.2 1.7 122 chr2L 8736241 intron raw - chr2L 8736302 intron raw - chr2L 8736363 intron raw - chr2L_7_8735001 chr2L_8735001 RAL-57 195 chr2L 8742752 8742946 chr2L 8742853 8743049 8 101 0.0 0.0 0.0 8.0 297 chr2L 8742752 intergenic not near genes chr2L 8742900 intergenic not near genes chr2L 8743049 intergenic not near genes chr2L_8_8740001 chr2L_8740001 RAL-57 196 chr2L 8789291 8789338 chr2L 8789382 8789423 14 95 4.5 2.5 3.5 3.1 132 chr2L 8789291 intergenic not near genes chr2L 8789357 intergenic not near genes chr2L 8789423 intergenic not near genes chr2L_14_8785001 chr2L_8785001 RAL-57 197 chr2L 8811850 8811868 chr2L 8811941 8811972 6 100 5.0 7.0 6.0 0.9 122 chr2L 8811850 intergenic not near genes chr2L 8811911 intergenic not near genes chr2L 8811972 intergenic not near genes chr2L_6_8810001 chr2L_8810001 RAL-57 198 chr2L 8813841 8813860 chr2L 8813943 8813956 9 100 3.5 11.5 7.5 1.1 115 chr2L 8813841 intergenic not near genes chr2L 8813898 intergenic not near genes chr2L 8813956 intergenic not near genes chr2L_9_8810001 chr2L_8810001 RAL-57 199 chr2L 8883154 8883189 chr2L 8883246 8883291 5 101 1.5 1.5 1.5 2.0 137 chr2L 8883154 intergenic not near genes chr2L 8883222 intergenic not near genes chr2L 8883291 intergenic not near genes chr2L_5_8880001 chr2L_8880001 RAL-57 200 chr2L 9000257 9000308 chr2L 9007792 9007842 roo 22 7535 8.5 5.5 7.0 2.8 7585 chr2L 9000257 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007842 intergenic not near genes chr2L_22_9000001 chr2L_9000001 RAL-57 201 chr2L 9025805 9025851 chr2L 9025911 9025958 8 106 0.5 2.0 1.2 3.6 153 chr2L 9025805 intron,3` UTR CG9582 -,CR44352 - chr2L 9025882 intron,3` UTR CG9582 -,CR44352 - chr2L 9025958 intron,3` UTR CG9582 -,CR44352 - chr2L_8_9025001 chr2L_9025001 RAL-57 202 chr2L 9084339 9084340 chr2L 16217660 16217660 6 7133321 13.5 15.5 14.5 0.4 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_12650001 chr2L_12650001 RAL-57 203 chr2L 9092014 9092039 chr2L 9092119 9092137 4 107 1.5 4.0 2.8 1.1 123 chr2L 9092014 intergenic not near genes chr2L 9092076 intergenic not near genes chr2L 9092137 intergenic not near genes chr2L_4_9090001 chr2L_9090001 RAL-57 204 chr2L 9202050 9202082 chr2L 9202151 9202156 5 94 4.5 5.0 4.8 0.9 106 chr2L 9202050 intron tai + chr2L 9202103 intron tai + chr2L 9202156 intron tai + chr2L_5_9200001 chr2L_9200001 RAL-57 205 chr2L 9235207 9235254 chr2L 9235338 9235383 27 131 7.0 0.0 3.5 6.0 176 chr2L 9235207 exon tai + chr2L 9235295 intron tai + chr2L 9235383 intron tai + chr2L_27_9235001 chr2L_9235001 RAL-57 206 chr2L 9251121 9251177 chr2L 9251243 9251269 28 118 7.0 7.5 7.2 3.4 148 chr2L 9251121 intergenic aust -,borr - chr2L 9251195 intergenic aust -,borr - chr2L 9251269 intergenic borr -,aust - chr2L_28_9250001 chr2L_9250001 RAL-57 207 chr2L 9264348 9264370 chr2L 9264473 9264495 6 125 2.0 1.0 1.5 2.4 147 chr2L 9264348 intron Ggamma30A + chr2L 9264422 intron Ggamma30A + chr2L 9264495 intron Ggamma30A + chr2L_6_9260001 chr2L_9260001 RAL-57 208 chr2L 9287299 9287355 chr2L 9287421 9287477 12 122 1.0 3.5 2.2 3.8 178 chr2L 9287299 intron Ggamma30A + chr2L 9287388 intron Ggamma30A + chr2L 9287477 intron Ggamma30A + chr2L_12_9285001 chr2L_9285001 RAL-57 209 chr2L 9359911 9359961 chr2L 9360079 9360094 5 158 1.5 2.0 1.8 1.8 183 chr2L 9359911 intergenic not near genes chr2L 9360002 intergenic not near genes chr2L 9360094 intergenic not near genes chr2L_5_9360001 chr2L_9360001 RAL-57 210 chr2L 9385093 9385146 chr2L 9385208 9385261 11 115 4.0 3.5 3.8 2.3 168 chr2L 9385093 intron Shawl - chr2L 9385177 intron Shawl - chr2L 9385261 intron Shawl - chr2L_11_9385001 chr2L_9385001 RAL-57 211 chr2L 9388413 9388451 chr2L 9389060 9389098 8 647 1.0 3.5 2.2 2.5 685 chr2L 9388413 intron,intron Shawl -,Aldh + chr2L 9388756 intron,intron Shawl -,Aldh + chr2L 9389098 intron,intron Shawl -,Aldh + chr2L_8_9385001 chr2L_9385001 RAL-57 212 chr2L 9393474 9393489 chr2L 9396466 9396481 jockey 5 2991 8.5 3.5 6.0 0.7 3007 chr2L 9393474 intron Shawl - chr2L 9394978 intron Shawl - chr2L 9396481 intron Shawl - chr2L_5_9390001 chr2L_9390001 RAL-57 213 chr2L 9393501 9393520 chr2L 9396491 9396508 jockey 4 2990 5.0 7.0 6.0 0.6 3007 chr2L 9393501 intron Shawl - chr2L 9395004 intron Shawl - chr2L 9396508 intron Shawl - chr2L_4_9395001 chr2L_9395001 RAL-57 214 chr2L 9681249 9681281 chr2L 9681358 9681360 4 97 1.0 0.5 0.8 2.2 111 chr2L 9681249 intergenic not near genes chr2L 9681304 intergenic not near genes chr2L 9681360 intergenic not near genes chr2L_4_9680001 chr2L_9680001 RAL-57 215 chr2L 9719753 9719778 chr2L 9719861 9719886 11 108 0.0 2.5 1.2 5.0 133 chr2L 9719753 intron Nckx30C - chr2L 9719820 intron Nckx30C - chr2L 9719886 intron Nckx30C - chr2L_11_9715001 chr2L_9715001 RAL-57 216 chr2L 9739410 9739458 chr2L 9739511 9739534 11 92 6.0 3.5 4.8 1.9 124 chr2L 9739410 intron Nckx30C - chr2L 9739472 intron Nckx30C - chr2L 9739534 intron Nckx30C - chr2L_11_9735001 chr2L_9735001 RAL-57 217 chr2L 9780380 9780422 chr2L 9780704 9780748 6 326 0.5 0.5 0.5 4.0 368 chr2L 9780380 intergenic not near genes chr2L 9780564 intergenic not near genes chr2L 9780748 intergenic not near genes chr2L_6_9780001 chr2L_9780001 RAL-57 218 chr2L 9892504 9892533 chr2L 9892605 9892633 8 101 3.5 6.5 5.0 1.3 129 chr2L 9892504 intron mtDNA-helicase - chr2L 9892568 intron mtDNA-helicase - chr2L 9892633 exon mtDNA-helicase - chr2L_8_9890001 chr2L_9890001 RAL-57 219 chr2L 9943833 9943890 chr2L 9943951 9944008 25 118 5.5 7.5 6.5 3.3 175 chr2L 9943833 intron CG5853 - chr2L 9943920 intron CG5853 - chr2L 9944008 intron CG5853 - chr2L_25_9940001 chr2L_9940001 RAL-57 220 chr2L 9973703 9973754 chr2L 9980847 9980898 HMS-Beagle 17 7136 3.0 6.0 4.5 3.1 7195 chr2L 9973703 intergenic not near genes chr2L 9977300 intergenic not near genes chr2L 9980898 intergenic not near genes chr2L_17_9975001 chr2L_9975001 RAL-57 221 chr2L 9986324 9986383 chr2L 9986444 9986462 34 110 11.0 12.5 11.8 2.7 138 chr2L 9986324 intron bib + chr2L 9986393 intron bib + chr2L 9986462 intron bib + chr2L_34_9985001 chr2L_9985001 RAL-57 222 chr2L 10051700 10051715 chr2L 10051810 10051825 4 110 17.0 6.5 11.8 0.3 125 chr2L 10051700 5` UTR CR44874 + chr2L 10051762 5` UTR CR44874 + chr2L 10051825 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-57 223 chr2L 10051722 10051752 chr2L 10051809 10051861 17 97 9.5 6.5 8.0 1.9 139 chr2L 10051722 5` UTR CR44874 + chr2L 10051792 5` UTR CR44874 + chr2L 10051861 5` UTR CR44874 + chr2L_17_10050001 chr2L_10050001 RAL-57 224 chr2L 10153187 10153198 chr2L 10153290 10153300 4 103 13.0 6.5 9.8 0.4 113 chr2L 10153187 intron,exon CG44153 -,CG4839 + chr2L 10153244 intron,intron CG44153 -,CG4839 + chr2L 10153300 intron,intron CG44153 -,CG4839 + chr2L_4_10150001 chr2L_10150001 RAL-57 225 chr2L 10153204 10153237 chr2L 10153282 10153323 8 95 3.0 5.5 4.2 1.5 119 chr2L 10153204 intron,exon CG44153 -,CG4839 + chr2L 10153264 intron,intron CG44153 -,CG4839 + chr2L 10153323 intron,exon CG44153 -,CG4839 + chr2L_8_10150001 chr2L_10150001 RAL-57 226 chr2L 10176024 10176024 chr2L 16071771 16071771 7 5895747 10.5 10.5 10.5 0.6 5895747 chr2L 10176024 intron CG44153 - chr2L 13123898 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_7_13120001 chr2L_13120001 RAL-57 227 chr2L 10209824 10209844 chr2L 10209926 10209946 7 102 6.5 0.0 3.2 1.7 122 chr2L 10209824 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209885 3` UTR CG5727 - chr2L 10209946 3` UTR CG5727 - chr2L_7_10205001 chr2L_10205001 RAL-57 228 chr2L 7780792 7780794 chr2L 10288460 10288462 4 2507668 24.5 10.5 17.5 0.2 2507670 chr2L 7780792 exon Uro + chr2L 9034627 intergenic not near genes chr2L 10288462 exon CG5604 - chr2L_4_9030001 chr2L_9030001 RAL-57 229 chr2L 10480287 10480326 chr2L 10480389 10480429 6 102 1.5 0.0 0.8 3.3 142 chr2L 10480287 intron RluA-2 + chr2L 10480358 intron RluA-2 + chr2L 10480429 intron RluA-2 + chr2L_6_10480001 chr2L_10480001 RAL-57 230 chr2L 10515345 10515385 chr2L 10515463 10515503 15 118 4.5 3.5 4.0 3.0 158 chr2L 10515345 intron,intron CG45083 -,Fatp - chr2L 10515424 intron,intron CG45083 -,Fatp - chr2L 10515503 intron,intron CG45083 -,Fatp - chr2L_15_10515001 chr2L_10515001 RAL-57 231 chr2L 10519367 10519400 chr2L 10519484 10519517 5 115 2.5 3.0 2.8 1.3 150 chr2L 10519367 intergenic Lrr47 + chr2L 10519442 intergenic Lrr47 + chr2L 10519517 intergenic Lrr47 + chr2L_5_10515001 chr2L_10515001 RAL-57 232 chr2L 10558248 10558296 chr2L 10558442 10558490 9 194 1.5 3.0 2.2 2.8 242 chr2L 10558248 intron Trim9 + chr2L 10558369 intron Trim9 + chr2L 10558490 intron Trim9 + chr2L_9_10555001 chr2L_10555001 RAL-57 233 chr2L 10579041 10579079 chr2L 10579156 10579190 6 114 0.5 0.5 0.5 4.0 149 chr2L 10579041 intron Trim9 + chr2L 10579116 intron Trim9 + chr2L 10579190 intron Trim9 + chr2L_6_10575001 chr2L_10575001 RAL-57 234 chr2L 10631186 10631208 chr2L 10631343 10631365 7 157 4.0 0.0 2.0 2.3 179 chr2L 10631186 intron CG7329 - chr2L 10631276 intron CG7329 - chr2L 10631365 intron CG7329 - chr2L_7_10630001 chr2L_10630001 RAL-57 235 chr2L 10634738 10634765 chr2L 10634843 10634870 5 105 2.0 2.5 2.2 1.6 132 chr2L 10634738 intron CG7329 - chr2L 10634804 intron CG7329 - chr2L 10634870 intron CG7329 - chr2L_5_10630001 chr2L_10630001 RAL-57 236 chr2L 10654492 10654534 chr2L 10654730 10654772 11 237 6.5 11.5 9.0 1.1 280 chr2L 10654492 3` UTR CG17098 + chr2L 10654632 intergenic CG17098 + chr2L 10654772 intergenic CG17098 + chr2L_11_10650001 chr2L_10650001 RAL-57 237 chr2L 10687540 10687600 chr2L 10687642 10687708 17 108 2.5 0.5 1.5 6.8 168 chr2L 10687540 intergenic CG7296 - chr2L 10687624 intergenic not near genes chr2L 10687708 intergenic not near genes chr2L_17_10685001 chr2L_10685001 RAL-57 238 chr2L 10688519 10688574 chr2L 10688620 10688675 21 101 4.0 3.5 3.8 4.4 156 chr2L 10688519 intergenic CG7294 - chr2L 10688597 intergenic CG7294 - chr2L 10688675 intergenic CG7294 - chr2L_21_10685001 chr2L_10685001 RAL-57 239 chr2L 10779702 10779751 chr2L 10779802 10779812 13 90 5.0 4.5 4.8 2.2 110 chr2L 10779702 intron CG31869 - chr2L 10779757 intron CG31869 - chr2L 10779812 intron CG31869 - chr2L_13_10775001 chr2L_10775001 RAL-57 240 chr2L 10813660 10813693 chr2L 10813837 10813867 4 173 1.0 1.0 1.0 2.0 207 chr2L 10813660 intron Nos - chr2L 10813764 intron Nos - chr2L 10813867 intron Nos - chr2L_4_10810001 chr2L_10810001 RAL-57 241 chr2L 10836309 10836362 chr2L 10836415 10836468 7 106 2.0 5.5 3.8 1.5 159 chr2L 10836309 intron Nos - chr2L 10836388 intron Nos - chr2L 10836468 intron Nos - chr2L_7_10835001 chr2L_10835001 RAL-57 242 chr2L 10852143 10852181 chr2L 10852257 10852295 27 114 16.0 14.5 15.2 1.7 152 chr2L 10852143 intron CG43129 + chr2L 10852219 intron CG43129 + chr2L 10852295 intron CG43129 + chr2L_27_10850001 chr2L_10850001 RAL-57 243 chr2L 10862846 10862853 chr2L 10864471 10864491 Rt1c 6 1636 13.5 14.0 13.8 0.4 1645 chr2L 10862846 3` UTR CR43807 - chr2L 10863668 intron CR43807 - chr2L 10864491 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-57 244 chr2L 10862854 10862875 chr2L 10864457 10864458 Rt1c 11 1613 9.0 9.0 9.0 1.1 1604 chr2L 10862854 3` UTR CR43807 - chr2L 10863656 intron CR43807 - chr2L 10864458 intron CR43807 - chr2L_11_10860001 chr2L_10860001 RAL-57 245 chr2L 10873032 10873080 chr2L 10873133 10873185 11 104 4.0 4.5 4.2 2.1 153 chr2L 10873032 intergenic not near genes chr2L 10873108 intergenic not near genes chr2L 10873185 intergenic not near genes chr2L_11_10870001 chr2L_10870001 RAL-57 246 chr2L 10884370 10884401 chr2L 10884452 10884505 5 90 3.0 4.0 3.5 1.1 135 chr2L 10884370 intergenic not near genes chr2L 10884438 intergenic not near genes chr2L 10884505 intergenic not near genes chr2L_5_10880001 chr2L_10880001 RAL-57 247 chr2L 10946950 10946975 chr2L 10956185 10956198 roo 7 9236 1.5 2.5 2.0 2.3 9248 chr2L 10946950 intron dpr2 - chr2L 10951574 intron dpr2 - chr2L 10956198 intron dpr2 - chr2L_7_10950001 chr2L_10950001 RAL-57 248 chr2L 11037067 11037097 chr2L 11037189 11037220 10 122 8.0 0.0 4.0 2.0 153 chr2L 11037067 intron Samuel - chr2L 11037144 intron Samuel - chr2L 11037220 intron Samuel - chr2L_10_11035001 chr2L_11035001 RAL-57 249 chr2L 11056545 11056593 chr2L 11056652 11056700 10 107 3.5 4.5 4.0 2.0 155 chr2L 11056545 intron Samuel - chr2L 11056622 intron Samuel - chr2L 11056700 intron Samuel - chr2L_10_11055001 chr2L_11055001 RAL-57 250 chr2L 11183760 11183774 chr2L 11183881 11183895 9 121 10.0 11.0 10.5 0.8 135 chr2L 11183760 intron Ca-beta - chr2L 11183828 intron Ca-beta - chr2L 11183895 intron Ca-beta - chr2L_9_11180001 chr2L_11180001 RAL-57 251 chr2L 11183785 11183812 chr2L 11183879 11183933 8 118 2.5 10.5 6.5 1.1 148 chr2L 11183785 intron Ca-beta - chr2L 11183859 intron Ca-beta - chr2L 11183933 intron Ca-beta - chr2L_8_11180001 chr2L_11180001 RAL-57 252 chr2L 11224040 11224091 chr2L 11224176 11224227 6 136 1.5 1.0 1.2 2.7 187 chr2L 11224040 intron ab + chr2L 11224134 intron ab + chr2L 11224227 intron ab + chr2L_6_11220001 chr2L_11220001 RAL-57 253 chr2L 11292353 11292406 chr2L 11292459 11292513 14 104 3.0 4.5 3.8 2.9 160 chr2L 11292353 intergenic not near genes chr2L 11292433 intergenic not near genes chr2L 11292513 intergenic not near genes chr2L_14_11290001 chr2L_11290001 RAL-57 254 chr2L 11315244 11315267 chr2L 11317673 11317696 G2 6 2429 3.5 3.0 3.2 1.4 2452 chr2L 11315244 intergenic not near genes chr2L 11316470 intergenic not near genes chr2L 11317696 intergenic not near genes chr2L_6_11315001 chr2L_11315001 RAL-57 255 chr2L 11380588 11380644 chr2L 11380688 11380746 8 96 2.5 2.0 2.2 2.5 158 chr2L 11380588 intergenic not near genes chr2L 11380667 intergenic not near genes chr2L 11380746 intergenic not near genes chr2L_8_11380001 chr2L_11380001 RAL-57 256 chr2L 11418643 11418688 chr2L 11418747 11418777 8 101 1.0 5.0 3.0 2.0 134 chr2L 11418643 intergenic not near genes chr2L 11418710 intergenic not near genes chr2L 11418777 intergenic not near genes chr2L_8_11415001 chr2L_11415001 RAL-57 257 chr2L 11496611 11496647 chr2L 11496714 11496749 13 100 7.0 3.0 5.0 2.2 138 chr2L 11496611 intergenic CG6488 - chr2L 11496680 intergenic CG6488 - chr2L 11496749 intergenic CG6488 - chr2L_13_11495001 chr2L_11495001 RAL-57 258 chr2L 11537962 11538011 chr2L 11538071 11538090 29 99 6.0 9.5 7.8 3.3 128 chr2L 11537962 intergenic not near genes chr2L 11538026 intergenic not near genes chr2L 11538090 intergenic not near genes chr2L_29_11535001 chr2L_11535001 RAL-57 259 chr2L 11540586 11540609 chr2L 11548013 11548036 Tabor 4 7427 2.5 4.0 3.2 1.0 7450 chr2L 11540586 intergenic not near genes chr2L 11544311 intergenic not near genes chr2L 11548036 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-57 260 chr2L 11614054 11614084 chr2L 11615547 11615564 hopper2 5 1489 2.0 3.0 2.5 1.4 1510 chr2L 11614054 intron kek2 + chr2L 11614809 intron kek2 + chr2L 11615564 intron kek2 + chr2L_5_11610001 chr2L_11610001 RAL-57 261 chr2L 11672114 11672165 chr2L 11672246 11672297 4 132 0.5 1.0 0.8 2.2 183 chr2L 11672114 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672297 intergenic not near genes chr2L_4_11670001 chr2L_11670001 RAL-57 262 chr2L 11707089 11707114 chr2L 11707315 11707340 4 226 2.5 0.0 1.2 1.8 251 chr2L 11707089 intergenic not near genes chr2L 11707214 intergenic not near genes chr2L 11707340 intergenic not near genes chr2L_4_11705001 chr2L_11705001 RAL-57 263 chr2L 11737721 11737760 chr2L 11737832 11737871 8 110 1.0 3.0 2.0 2.7 150 chr2L 11737721 intergenic CR44145 + chr2L 11737796 intergenic CR44145 + chr2L 11737871 intergenic CR44145 + chr2L_8_11735001 chr2L_11735001 RAL-57 264 chr2L 11820401 11820464 chr2L 11820511 11820570 39 106 1.5 17.0 9.2 3.8 169 chr2L 11820401 intron Pde1c - chr2L 11820486 intron Pde1c - chr2L 11820570 intron Pde1c - chr2L_39_11820001 chr2L_11820001 RAL-57 265 chr2L 11825682 11825688 chr2L 11825786 11825792 6 104 11.0 0.0 5.5 0.9 110 chr2L 11825682 intron Pde1c - chr2L 11825737 intron Pde1c - chr2L 11825792 intron Pde1c - chr2L_6_11825001 chr2L_11825001 RAL-57 266 chr2L 11841325 11841365 chr2L 11841447 11841497 5 126 1.5 0.0 0.8 2.8 172 chr2L 11841325 intron Pde1c - chr2L 11841411 intron Pde1c - chr2L 11841497 intron Pde1c - chr2L_5_11840001 chr2L_11840001 RAL-57 267 chr2L 11889980 11890033 chr2L 11890088 11890139 6 101 3.5 1.0 2.2 1.9 159 chr2L 11889980 intron Pde1c - chr2L 11890060 intron Pde1c - chr2L 11890139 intron Pde1c - chr2L_6_11890001 chr2L_11890001 RAL-57 268 chr2L 12067321 12067358 chr2L 12074398 12074435 297 15 7077 4.5 7.0 5.8 2.2 7114 chr2L 12067321 intergenic not near genes chr2L 12070878 intergenic not near genes chr2L 12074435 intergenic not near genes chr2L_15_12070001 chr2L_12070001 RAL-57 269 chr2L 12147453 12147483 chr2L 12150306 12150336 4 2853 5.5 10.5 8.0 0.4 2883 chr2L 12147453 intron CG31760 + chr2L 12148894 intron CG31760 + chr2L 12150336 intron CG31760 + chr2L_4_12145001 chr2L_12145001 RAL-57 270 chr2L 12176189 12176228 chr2L 12176295 12176334 12 106 0.5 4.5 2.5 3.4 145 chr2L 12176189 intron,intron aret +,atilla - chr2L 12176262 intron,intron aret +,atilla - chr2L 12176334 intron,intron aret +,atilla - chr2L_12_12175001 chr2L_12175001 RAL-57 271 chr2L 12272137 12272196 chr2L 12272240 12272297 24 101 5.5 6.5 6.0 3.4 160 chr2L 12272137 intron aret + chr2L 12272217 intron aret + chr2L 12272297 intron aret + chr2L_24_12270001 chr2L_12270001 RAL-57 272 chr2L 12418403 12418428 chr2L 12418511 12418519 4 104 1.0 1.5 1.2 1.8 116 chr2L 12418403 intron vir-1 - chr2L 12418461 intron vir-1 - chr2L 12418519 intron vir-1 - chr2L_4_12415001 chr2L_12415001 RAL-57 273 chr2L 12426139 12426155 chr2L 12426222 12426262 4 94 4.0 6.0 5.0 0.7 123 chr2L 12426139 exon CG6405 + chr2L 12426200 exon CG6405 + chr2L 12426262 exon CG6405 + chr2L_4_12425001 chr2L_12425001 RAL-57 274 chr2L 12426158 12426164 chr2L 12426216 12426272 6 88 2.0 5.0 3.5 1.3 114 chr2L 12426158 exon CG6405 + chr2L 12426215 exon CG6405 + chr2L 12426272 exon CG6405 + chr2L_6_12425001 chr2L_12425001 RAL-57 275 chr2L 12487869 12487893 chr2L 12487975 12487999 5 106 2.0 0.0 1.0 2.5 130 chr2L 12487869 intron bun - chr2L 12487934 intron bun - chr2L 12487999 intron bun - chr2L_5_12485001 chr2L_12485001 RAL-57 276 chr2L 12529272 12529429 chr2L 12529430 12529527 5 123 0.0 0.0 0.0 5.0 255 chr2L 12529272 intron bun - chr2L 12529400 intron bun - chr2L 12529527 intron bun - chr2L_5_12525001 chr2L_12525001 RAL-57 277 chr2L 12653007 12653063 chr2L 12653109 12653135 30 101 6.5 14.0 10.2 2.7 128 chr2L 12653007 intergenic not near genes chr2L 12653071 intergenic not near genes chr2L 12653135 intergenic not near genes chr2L_30_12650001 chr2L_12650001 RAL-57 278 chr2L 12684197 12684247 chr2L 12684303 12684353 17 106 5.0 3.5 4.2 3.3 156 chr2L 12684197 intron pdm2 + chr2L 12684275 intron pdm2 + chr2L 12684353 intron pdm2 + chr2L_17_12680001 chr2L_12680001 RAL-57 279 chr2L 12693822 12693854 chr2L 12693915 12693956 26 100 12.5 6.0 9.2 2.5 134 chr2L 12693822 exon CG6153 + chr2L 12693889 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693956 3` UTR CG5780 - chr2L_26_12690001 chr2L_12690001 RAL-57 280 chr2L 12739158 12739199 chr2L 12743964 12744005 Doc 12 4806 3.5 4.0 3.8 2.5 4847 chr2L 12739158 exon MRP + chr2L 12741582 intron MRP + chr2L 12744005 exon MRP + chr2L_12_12740001 chr2L_12740001 RAL-57 281 chr2L 12766736 12766752 chr2L 12766838 12766855 5 103 2.0 0.5 1.2 2.3 119 chr2L 12766736 intergenic not near genes chr2L 12766796 intergenic not near genes chr2L 12766855 intergenic not near genes chr2L_5_12765001 chr2L_12765001 RAL-57 282 chr2L 12791586 12791630 chr2L 12795286 12795320 F-element 6 3694 0.0 1.5 0.8 3.3 3734 chr2L 12791586 intergenic not near genes chr2L 12793453 intergenic not near genes chr2L 12795320 intergenic not near genes chr2L_6_12790001 chr2L_12790001 RAL-57 283 chr2L 12933827 12933875 chr2L 12941319 12941358 blood 8 7490 2.0 1.5 1.8 2.9 7531 chr2L 12933827 intergenic not near genes chr2L 12937592 intergenic not near genes chr2L 12941358 intergenic not near genes chr2L_8_12935001 chr2L_12935001 RAL-57 284 chr2L 13036224 13036266 chr2L 13036491 13036533 X-element 7 267 3.5 3.0 3.2 1.7 309 chr2L 13036224 intron CG9932 - chr2L 13036378 intron CG9932 - chr2L 13036533 intron CG9932 - chr2L_7_13035001 chr2L_13035001 RAL-57 285 chr2L 13109424 13109478 chr2L 13109577 13109631 12 153 1.0 1.5 1.2 5.5 207 chr2L 13109424 3` UTR CG5142 + chr2L 13109528 intergenic CG5142 + chr2L 13109631 intergenic CG5142 + chr2L_12_13105001 chr2L_13105001 RAL-57 286 chr2L 13152204 13152260 chr2L 13152307 13152367 6 104 3.5 4.5 4.0 1.2 163 chr2L 13152204 intergenic not near genes chr2L 13152286 intergenic not near genes chr2L 13152367 intergenic not near genes chr2L_6_13150001 chr2L_13150001 RAL-57 287 chr2L 13154097 13154119 chr2L 13154200 13154222 7 103 9.0 0.0 4.5 1.3 125 chr2L 13154097 intergenic not near genes chr2L 13154160 intergenic not near genes chr2L 13154222 intergenic not near genes chr2L_7_13150001 chr2L_13150001 RAL-57 288 chr2L 13204296 13204304 chr2L 13204419 13204428 6 123 14.5 7.0 10.8 0.5 132 chr2L 13204296 intron Pect + chr2L 13204362 intron Pect + chr2L 13204428 intron Pect + chr2L_6_13200001 chr2L_13200001 RAL-57 289 chr2L 13204306 13204339 chr2L 13204413 13204427 6 98 4.5 5.0 4.8 1.0 121 chr2L 13204306 intron Pect + chr2L 13204366 intron Pect + chr2L 13204427 intron Pect + chr2L_6_13200001 chr2L_13200001 RAL-57 290 chr2L 13255262 13255298 chr2L 13255430 13255466 9 167 1.0 8.5 4.8 1.6 204 chr2L 13255262 intron CG31728 + chr2L 13255364 intron CG31728 + chr2L 13255466 exon CG31728 + chr2L_9_13255001 chr2L_13255001 RAL-57 291 chr2L 13405627 13405645 chr2L 13410447 13410466 Doc 15 4820 19.0 10.5 14.8 0.9 4839 chr2L 13405627 exon CG7110 + chr2L 13408046 intron CG7110 + chr2L 13410466 intron CG7110 + chr2L_15_13405001 chr2L_13405001 RAL-57 292 chr2L 13405648 13405678 chr2L 13410446 13410500 Doc 40 4820 7.5 10.5 9.0 4.0 4852 chr2L 13405648 exon CG7110 + chr2L 13408074 intron CG7110 + chr2L 13410500 intron CG7110 + chr2L_40_13405001 chr2L_13405001 RAL-57 293 chr2L 13449442 13449494 chr2L 13456903 13456955 Quasimodo 33 7461 6.0 14.0 10.0 3.0 7513 chr2L 13449442 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456955 intron CG42784 + chr2L_33_13450001 chr2L_13450001 RAL-57 294 chr2L 13481438 13481466 chr2L 13482064 13482089 jockey 9 630 7.0 4.0 5.5 1.4 651 chr2L 13481438 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482089 intron CG42784 + chr2L_9_13480001 chr2L_13480001 RAL-57 295 chr2L 13522109 13522161 chr2L 13527652 13527704 Transpac 5 5543 0.5 4.0 2.2 1.6 5595 chr2L 13522109 intron B4 - chr2L 13524906 intron B4 - chr2L 13527704 intron B4 - chr2L_5_13520001 chr2L_13520001 RAL-57 296 chr2L 13557349 13557392 chr2L 13557469 13557512 8 120 2.5 3.5 3.0 2.0 163 chr2L 13557349 intron kuz + chr2L 13557430 intron kuz + chr2L 13557512 intron kuz + chr2L_8_13555001 chr2L_13555001 RAL-57 297 chr2L 13560381 13560416 chr2L 13565227 13565260 F-element 9 4846 5.0 3.5 4.2 1.7 4879 chr2L 13560381 intron kuz + chr2L 13562820 intron kuz + chr2L 13565260 intron kuz + chr2L_9_13560001 chr2L_13560001 RAL-57 298 chr2L 13574664 13574707 chr2L 13574768 13574780 10 100 4.0 3.0 3.5 2.2 116 chr2L 13574664 intron kuz + chr2L 13574722 intron kuz + chr2L 13574780 intron kuz + chr2L_10_13570001 chr2L_13570001 RAL-57 299 chr2L 13622112 13622158 chr2L 13622236 13622238 5 105 1.0 0.0 0.5 3.3 126 chr2L 13622112 intron kuz + chr2L 13622175 intron kuz + chr2L 13622238 intron kuz + chr2L_5_13620001 chr2L_13620001 RAL-57 300 chr2L 13630240 13630290 chr2L 13630357 13630401 15 117 5.5 7.5 6.5 2.0 161 chr2L 13630240 intron kuz + chr2L 13630320 intron kuz + chr2L 13630401 intron kuz + chr2L_15_13630001 chr2L_13630001 RAL-57 301 chr2L 13713564 13713571 chr2L 13713665 13713672 6 101 3.0 4.5 3.8 1.2 108 chr2L 13713564 intron CG31814 - chr2L 13713618 intron CG31814 - chr2L 13713672 intron CG31814 - chr2L_6_13710001 chr2L_13710001 RAL-57 302 chr2L 13740044 13740093 chr2L 13740147 13740195 4 102 0.0 1.5 0.8 2.2 151 chr2L 13740044 intergenic not near genes chr2L 13740120 intergenic not near genes chr2L 13740195 intergenic not near genes chr2L_4_13740001 chr2L_13740001 RAL-57 303 chr2L 13761784 13761825 chr2L 13762920 13762961 Doc 8 1135 1.5 2.5 2.0 2.7 1177 chr2L 13761784 intron TM9SF4 + chr2L 13762372 intron TM9SF4 + chr2L 13762961 intron TM9SF4 + chr2L_8_13760001 chr2L_13760001 RAL-57 304 chr2L 6642852 6642866 chr2L 13767423 13767450 4 7124570 24.5 16.5 20.5 0.2 7124598 chr2L 6642852 intron CG31635 - chr2L 10205151 3` UTR CG5734 - chr2L 13767450 intron TM9SF4 + chr2L_4_10205001 chr2L_10205001 RAL-57 305 chr2L 13853070 13853111 chr2L 13862245 13862286 roo 6 9175 2.0 1.5 1.8 2.1 9216 chr2L 13853070 intron CenG1A + chr2L 13857678 intron CenG1A + chr2L 13862286 intron CenG1A + chr2L_6_13855001 chr2L_13855001 RAL-57 306 chr2L 13913570 13913603 chr2L 13913708 13913741 13 138 9.5 7.0 8.2 1.4 171 chr2L 13913570 intergenic not near genes chr2L 13913656 intergenic not near genes chr2L 13913741 intergenic not near genes chr2L_13_13910001 chr2L_13910001 RAL-57 307 chr2L 14071975 14072025 chr2L 14072177 14072229 9 194 3.5 2.0 2.8 2.4 254 chr2L 14071975 intron nAChRalpha5 + chr2L 14072102 intron nAChRalpha5 + chr2L 14072229 intron nAChRalpha5 + chr2L_9_14070001 chr2L_14070001 RAL-57 308 chr2L 14078769 14078804 chr2L 14078881 14078916 4 112 1.0 2.0 1.5 1.6 147 chr2L 14078769 intron nAChRalpha5 + chr2L 14078842 intron nAChRalpha5 + chr2L 14078916 intron nAChRalpha5 + chr2L_4_14075001 chr2L_14075001 RAL-57 309 chr2L 14160662 14160719 chr2L 14160773 14160830 21 111 3.5 4.0 3.8 4.4 168 chr2L 14160662 intergenic CG17341 +,CG43332 - chr2L 14160746 intergenic CG17341 +,CG43332 - chr2L 14160830 intergenic CG17341 +,CG43332 - chr2L_21_14160001 chr2L_14160001 RAL-57 310 chr2L 14162127 14162141 chr2L 14162256 14162270 5 129 6.0 22.5 14.2 0.3 143 chr2L 14162127 exon CG43332 - chr2L 14162198 exon CG43332 - chr2L 14162270 exon CG43332 - chr2L_5_14160001 chr2L_14160001 RAL-57 311 chr2L 14180051 14180088 chr2L 14180152 14180189 8 101 1.5 2.5 2.0 2.7 138 chr2L 14180051 intron CG43333 - chr2L 14180120 intron CG43333 - chr2L 14180189 intron CG43333 - chr2L_8_14180001 chr2L_14180001 RAL-57 312 chr2L 14313160 14313213 chr2L 14313328 14313382 8 169 2.0 4.0 3.0 2.0 222 chr2L 14313160 intron wb + chr2L 14313271 intron wb + chr2L 14313382 intron wb + chr2L_8_14310001 chr2L_14310001 RAL-57 313 chr2L 14369121 14369151 chr2L 14369262 14369292 10 140 2.0 2.5 2.2 3.1 171 chr2L 14369121 intergenic not near genes chr2L 14369206 intergenic not near genes chr2L 14369292 intergenic not near genes chr2L_10_14365001 chr2L_14365001 RAL-57 314 chr2L 14378018 14378045 chr2L 14378369 14378396 6 351 1.0 1.0 1.0 3.0 378 chr2L 14378018 intergenic ppk - chr2L 14378207 intergenic ppk - chr2L 14378396 3` UTR ppk - chr2L_6_14375001 chr2L_14375001 RAL-57 315 chr2L 14546892 14546892 chr2L 16217660 16217660 4 1670768 18.5 15.5 17.0 0.2 1670768 chr2L 14546892 intergenic not near genes chr2L 15382276 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_15380001 chr2L_15380001 RAL-57 316 chr2L 14588360 14588419 chr2L 14588539 14588598 22 177 7.0 7.5 7.2 2.7 238 chr2L 14588360 intergenic CG42680 - chr2L 14588479 intergenic CG42680 - chr2L 14588598 intergenic CG42680 - chr2L_22_14585001 chr2L_14585001 RAL-57 317 chr2L 14642550 14642598 chr2L 14651738 14651786 roo 27 9187 11.0 7.0 9.0 2.7 9236 chr2L 14642550 intron osp - chr2L 14647168 intron osp - chr2L 14651786 intron osp - chr2L_27_14645001 chr2L_14645001 RAL-57 318 chr2L 14694253 14694284 chr2L 14694402 14694433 5 149 0.0 2.0 1.0 2.5 180 chr2L 14694253 intergenic not near genes chr2L 14694343 intergenic not near genes chr2L 14694433 intergenic not near genes chr2L_5_14690001 chr2L_14690001 RAL-57 319 chr2L 14726558 14726572 chr2L 14726665 14726679 5 107 5.5 3.0 4.2 1.0 121 chr2L 14726558 intron CG42685 - chr2L 14726618 intron CG42685 - chr2L 14726679 intron CG42685 - chr2L_5_14725001 chr2L_14725001 RAL-57 320 chr2L 14768916 14768954 chr2L 14769019 14769057 4 103 0.0 1.5 0.8 2.2 141 chr2L 14768916 intergenic not near genes chr2L 14768986 intergenic not near genes chr2L 14769057 intergenic not near genes chr2L_4_14765001 chr2L_14765001 RAL-57 321 chr2L 14778786 14778833 chr2L 14779099 14779142 4 312 2.0 1.5 1.8 1.4 356 chr2L 14778786 intergenic not near genes chr2L 14778964 intergenic not near genes chr2L 14779142 intergenic not near genes chr2L_4_14775001 chr2L_14775001 RAL-57 322 chr2L 14803887 14803904 chr2L 14809111 14809132 copia 4 5222 2.0 1.5 1.8 1.4 5245 chr2L 14803887 intergenic not near genes chr2L 14806510 intergenic not near genes chr2L 14809132 intergenic not near genes chr2L_4_14805001 chr2L_14805001 RAL-57 323 chr2L 14839723 14839775 chr2L 14839824 14839874 9 101 4.5 3.5 4.0 1.8 151 chr2L 14839723 intergenic not near genes chr2L 14839798 intergenic not near genes chr2L 14839874 intergenic not near genes chr2L_9_14835001 chr2L_14835001 RAL-57 324 chr2L 14840956 14841001 chr2L 14841069 14841113 10 112 5.0 2.5 3.8 2.1 157 chr2L 14840956 3` UTR CR43805 - chr2L 14841034 3` UTR CR43805 - chr2L 14841113 3` UTR CR43805 - chr2L_10_14840001 chr2L_14840001 RAL-57 325 chr2L 14849264 14849307 chr2L 14849378 14849421 5 115 2.5 0.0 1.2 2.3 157 chr2L 14849264 intron CG15279 - chr2L 14849342 intron CG15279 - chr2L 14849421 intron CG15279 - chr2L_5_14845001 chr2L_14845001 RAL-57 326 chr2L 14889935 14889982 chr2L 14890385 14890432 jockey 4 450 2.0 0.5 1.2 1.8 497 chr2L 14889935 intergenic not near genes chr2L 14890184 intergenic not near genes chr2L 14890432 intergenic not near genes chr2L_4_14890001 chr2L_14890001 RAL-57 327 chr2L 14901770 14901778 chr2L 14901866 14901881 4 100 8.0 3.0 5.5 0.6 111 chr2L 14901770 intergenic not near genes chr2L 14901826 intergenic not near genes chr2L 14901881 intergenic not near genes chr2L_4_14900001 chr2L_14900001 RAL-57 328 chr2L 14901785 14901817 chr2L 14901864 14901919 10 98 2.5 3.0 2.8 2.6 134 chr2L 14901785 intergenic not near genes chr2L 14901852 intergenic not near genes chr2L 14901919 intergenic not near genes chr2L_10_14900001 chr2L_14900001 RAL-57 329 chr2L 14905713 14905764 chr2L 14905835 14905885 10 122 0.5 2.0 1.2 4.5 172 chr2L 14905713 intergenic not near genes chr2L 14905799 intergenic not near genes chr2L 14905885 intergenic not near genes chr2L_10_14905001 chr2L_14905001 RAL-57 330 chr2L 14922521 14922566 chr2L 14922646 14922691 13 123 2.5 6.5 4.5 2.4 170 chr2L 14922521 intron CG42313 - chr2L 14922606 intron CG42313 - chr2L 14922691 intron CG42313 - chr2L_13_14920001 chr2L_14920001 RAL-57 331 chr2L 14984365 14984393 chr2L 14991992 14992020 opus 4 7627 2.5 1.5 2.0 1.3 7655 chr2L 14984365 intron mol - chr2L 14988192 intron mol - chr2L 14992020 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-57 332 chr2L 15003521 15003572 chr2L 15003630 15003674 17 108 2.0 3.5 2.8 4.5 153 chr2L 15003521 intergenic not near genes chr2L 15003598 intergenic not near genes chr2L 15003674 intergenic not near genes chr2L_17_15000001 chr2L_15000001 RAL-57 333 chr2L 15013132 15013174 chr2L 15013260 15013308 13 128 2.0 2.0 2.0 4.3 176 chr2L 15013132 intergenic CR43856 - chr2L 15013220 intergenic not near genes chr2L 15013308 intergenic not near genes chr2L_13_15010001 chr2L_15010001 RAL-57 334 chr2L 15021416 15021472 chr2L 15021517 15021573 26 101 13.0 8.5 10.8 2.2 157 chr2L 15021416 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021573 intron GABA-B-R1 + chr2L_26_15020001 chr2L_15020001 RAL-57 335 chr2L 15078048 15078095 chr2L 15078161 15078207 9 113 2.0 0.5 1.2 4.1 159 chr2L 15078048 intron CG15270 + chr2L 15078128 intron CG15270 + chr2L 15078207 intron CG15270 + chr2L_9_15075001 chr2L_15075001 RAL-57 336 chr2L 15087729 15087768 chr2L 15087864 15087903 32 133 11.0 15.5 13.2 2.3 174 chr2L 15087729 exon CG15270 + chr2L 15087816 intron CG15270 + chr2L 15087903 intron CG15270 + chr2L_32_15085001 chr2L_15085001 RAL-57 337 chr2L 15138756 15138801 chr2L 15138864 15138913 4 110 0.0 4.0 2.0 1.3 157 chr2L 15138756 intergenic not near genes chr2L 15138834 intergenic not near genes chr2L 15138913 intergenic not near genes chr2L_4_15135001 chr2L_15135001 RAL-57 338 chr2L 15161226 15161273 chr2L 15161387 15161434 9 161 1.0 2.0 1.5 3.6 208 chr2L 15161226 intergenic CR44770 + chr2L 15161330 intergenic CR44770 + chr2L 15161434 intergenic CR44770 +,CG4168 - chr2L_9_15160001 chr2L_15160001 RAL-57 339 chr2L 15223866 15223904 chr2L 15224001 15224039 16 132 7.0 8.0 7.5 1.9 173 chr2L 15223866 intergenic not near genes chr2L 15223952 intergenic not near genes chr2L 15224039 intergenic not near genes chr2L_16_15220001 chr2L_15220001 RAL-57 340 chr2L 15226347 15226365 chr2L 15226448 15226466 6 101 11.5 7.0 9.2 0.6 119 chr2L 15226347 intergenic not near genes chr2L 15226406 intergenic not near genes chr2L 15226466 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-57 341 chr2L 15226367 15226393 chr2L 15226444 15226494 9 94 8.5 6.5 7.5 1.1 127 chr2L 15226367 intergenic not near genes chr2L 15226430 intergenic not near genes chr2L 15226494 intergenic not near genes chr2L_9_15225001 chr2L_15225001 RAL-57 342 chr2L 15305460 15305514 chr2L 15305577 15305630 23 114 12.5 4.0 8.2 2.5 170 chr2L 15305460 intergenic not near genes chr2L 15305545 intergenic not near genes chr2L 15305630 intergenic not near genes chr2L_23_15305001 chr2L_15305001 RAL-57 343 chr2L 15309333 15309381 chr2L 15309460 15309509 6 128 1.0 1.0 1.0 3.0 176 chr2L 15309333 intergenic not near genes chr2L 15309421 intergenic not near genes chr2L 15309509 intergenic not near genes chr2L_6_15305001 chr2L_15305001 RAL-57 344 chr2L 15413244 15413276 chr2L 15413369 15413400 4 124 3.0 2.0 2.5 1.1 156 chr2L 15413244 intergenic not near genes chr2L 15413322 intergenic not near genes chr2L 15413400 intergenic not near genes chr2L_4_15410001 chr2L_15410001 RAL-57 345 chr2L 15446030 15446064 chr2L 15453524 15453558 blood 6 7494 5.0 2.5 3.8 1.2 7528 chr2L 15446030 intergenic not near genes chr2L 15449794 intergenic not near genes chr2L 15453558 intergenic not near genes chr2L_6_15445001 chr2L_15445001 RAL-57 346 chr2L 15514310 15514330 chr2L 15514409 15514439 6 107 1.5 3.0 2.2 1.9 129 chr2L 15514310 intergenic not near genes chr2L 15514374 intergenic not near genes chr2L 15514439 intergenic not near genes chr2L_6_15510001 chr2L_15510001 RAL-57 347 chr2L 15586388 15586440 chr2L 15593465 15593517 297 8 7077 2.5 3.5 3.0 2.0 7129 chr2L 15586388 intergenic not near genes chr2L 15589952 intergenic not near genes chr2L 15593517 intergenic not near genes chr2L_8_15585001 chr2L_15585001 RAL-57 348 chr2L 15626367 15626389 chr2L 15626443 15626446 5 67 5.0 4.0 4.5 0.9 79 chr2L 15626367 intergenic not near genes chr2L 15626406 intergenic not near genes chr2L 15626446 intergenic not near genes chr2L_5_15625001 chr2L_15625001 RAL-57 349 chr2L 15730863 15730894 chr2L 15730973 15731004 16 110 12.0 12.0 12.0 1.2 141 chr2L 15730863 intron CycE - chr2L 15730934 intron CycE - chr2L 15731004 intron CycE - chr2L_16_15730001 chr2L_15730001 RAL-57 350 chr2L 15736959 15736988 chr2L 15737066 15737079 4 103 1.5 0.5 1.0 2.0 120 chr2L 15736959 intron CycE - chr2L 15737019 intron CycE - chr2L 15737079 intron CycE - chr2L_4_15735001 chr2L_15735001 RAL-57 351 chr2L 15761099 15761104 chr2L 15761204 15761209 6 105 0.0 14.5 7.2 0.7 110 chr2L 15761099 intron Gli - chr2L 15761154 intron Gli - chr2L 15761209 intron Gli - chr2L_6_15760001 chr2L_15760001 RAL-57 352 chr2L 15801129 15801161 chr2L 15801254 15801286 4 125 1.0 0.5 0.8 2.2 157 chr2L 15801129 intergenic not near genes chr2L 15801208 intergenic not near genes chr2L 15801286 intergenic not near genes chr2L_4_15800001 chr2L_15800001 RAL-57 353 chr2L 15820230 15820272 chr2L 15820370 15820412 4 140 1.5 2.0 1.8 1.4 182 chr2L 15820230 intergenic not near genes chr2L 15820321 intergenic not near genes chr2L 15820412 intergenic not near genes chr2L_4_15820001 chr2L_15820001 RAL-57 354 chr2L 15889472 15889510 chr2L 15889574 15889611 9 100 3.0 1.0 2.0 3.0 139 chr2L 15889472 exon Tep1 - chr2L 15889542 exon Tep1 - chr2L 15889611 exon Tep1 - chr2L_9_15885001 chr2L_15885001 RAL-57 355 chr2L 15931077 15931094 chr2L 15933287 15933311 4 2214 1.0 4.0 2.5 1.1 2234 chr2L 15931077 intron beat-Ib - chr2L 15932194 intron beat-Ib - chr2L 15933311 intron beat-Ib - chr2L_4_15930001 chr2L_15930001 RAL-57 356 chr2L 15936171 15936214 chr2L 15936537 15936571 9 364 20.5 26.0 23.2 0.4 400 chr2L 15936171 intron beat-Ib - chr2L 15936371 intron beat-Ib - chr2L 15936571 intron beat-Ib - chr2L_9_15935001 chr2L_15935001 RAL-57 357 chr2L 15935619 15935663 chr2L 15937253 15937274 15 1620 46.0 59.0 52.5 0.3 1655 chr2L 15935619 intron beat-Ib - chr2L 15936446 intron beat-Ib - chr2L 15937274 intron beat-Ib - chr2L_15_15935001 chr2L_15935001 RAL-57 358 chr2L 15953635 15953670 chr2L 15953741 15953774 9 104 6.0 5.0 5.5 1.4 139 chr2L 15953635 intron beat-Ib - chr2L 15953704 intron beat-Ib - chr2L 15953774 intron beat-Ib - chr2L_9_15950001 chr2L_15950001 RAL-57 359 chr2L 16001450 16001481 chr2L 16001563 16001594 9 113 0.0 10.5 5.2 1.5 144 chr2L 16001450 intron beat-Ic + chr2L 16001522 intron beat-Ic + chr2L 16001594 intron beat-Ic + chr2L_9_16000001 chr2L_16000001 RAL-57 360 chr2L 16005606 16005650 chr2L 16005740 16005784 14 134 4.5 3.0 3.8 2.9 178 chr2L 16005606 intron beat-Ic + chr2L 16005695 intron beat-Ic + chr2L 16005784 intron beat-Ic + chr2L_14_16005001 chr2L_16005001 RAL-57 361 chr2L 16051590 16051638 chr2L 16051691 16051742 6 97 0.0 2.0 1.0 3.0 152 chr2L 16051590 intron beat-Ia + chr2L 16051666 intron beat-Ia + chr2L 16051742 intron beat-Ia + chr2L_6_16050001 chr2L_16050001 RAL-57 362 chr2L 9723025 9723026 chr2L 16071771 16071771 6 6348745 27.5 10.5 19.0 0.3 6348746 chr2L 9723025 intron Nckx30C - chr2L 12897398 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_12895001 chr2L_12895001 RAL-57 363 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 163 145889 11.0 15.5 13.2 11.5 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_163_16140001 chr2L_16140001 RAL-57 364 chr2L 16084570 16084612 chr2L 16084707 16084749 11 136 3.0 4.5 3.8 2.3 179 chr2L 16084570 intergenic not near genes chr2L 16084660 intergenic not near genes chr2L 16084749 intergenic not near genes chr2L_11_16080001 chr2L_16080001 RAL-57 365 chr2L 9084338 9084340 chr2L 16217660 16217660 9 7133321 13.5 15.5 14.5 0.6 7133322 chr2L 9084338 intron Toll-4 + chr2L 12650999 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-57 366 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 110 145889 11.0 15.5 13.2 7.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_110_16140001 chr2L_16140001 RAL-57 367 chr2L 16217660 16217660 chr2L 18622718 18622719 8 2405058 14.0 20.0 17.0 0.4 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_8_17420001 chr2L_17420001 RAL-57 368 chr2L 16243677 16243852 chr2L 16243785 16243972 10 116 0.5 0.5 0.5 6.7 295 chr2L 16243677 exon CG42818 + chr2L 16243824 exon CG42818 + chr2L 16243972 exon CG42818 + chr2L_10_16240001 chr2L_16240001 RAL-57 369 chr2L 16280237 16280286 chr2L 16281425 16281460 1360 16 1184 3.0 5.0 4.0 3.2 1223 chr2L 16280237 intron crp - chr2L 16280848 intron crp - chr2L 16281460 intron crp - chr2L_16_16280001 chr2L_16280001 RAL-57 370 chr2L 16320328 16320365 chr2L 16320492 16320519 6 162 1.0 1.0 1.0 3.0 191 chr2L 16320328 intron cact - chr2L 16320424 intron cact - chr2L 16320519 intron cact - chr2L_6_16320001 chr2L_16320001 RAL-57 371 chr2L 16354759 16354784 chr2L 16354876 16354895 12 116 4.5 8.0 6.2 1.7 136 chr2L 16354759 intergenic CaBP1 -,CG4455 + chr2L 16354827 intergenic CaBP1 -,CG4455 + chr2L 16354895 3` UTR CaBP1 - chr2L_12_16350001 chr2L_16350001 RAL-57 372 chr2L 16434083 16434130 chr2L 16434190 16434237 6 107 1.5 1.5 1.5 2.4 154 chr2L 16434083 intron CG5888 - chr2L 16434160 intron CG5888 - chr2L 16434237 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-57 373 chr2L 16504978 16505015 chr2L 16505113 16505150 16 135 0.0 10.0 5.0 2.7 172 chr2L 16504978 intron Tpr2 + chr2L 16505064 intron Tpr2 + chr2L 16505150 intron Tpr2 + chr2L_16_16505001 chr2L_16505001 RAL-57 374 chr2L 16511938 16511992 chr2L 16519077 16519131 HMS-Beagle 24 7139 4.0 6.5 5.2 3.9 7193 chr2L 16511938 intron CG5953 - chr2L 16515534 intron CG5953 - chr2L 16519131 intron CG5953 - chr2L_24_16515001 chr2L_16515001 RAL-57 375 chr2L 16537299 16537355 chr2L 16537400 16537456 15 101 4.0 5.0 4.5 2.7 157 chr2L 16537299 intergenic not near genes chr2L 16537378 intergenic not near genes chr2L 16537456 intergenic not near genes chr2L_15_16535001 chr2L_16535001 RAL-57 376 chr2L 16551856 16551899 chr2L 16551968 16552011 7 111 1.0 2.0 1.5 2.8 155 chr2L 16551856 intron CG42389 + chr2L 16551934 intron CG42389 + chr2L 16552011 intron CG42389 + chr2L_7_16550001 chr2L_16550001 RAL-57 377 chr2L 16554535 16554544 chr2L 16554653 16554662 5 118 6.5 4.0 5.2 0.8 127 chr2L 16554535 intron CG42389 + chr2L 16554598 intron CG42389 + chr2L 16554662 intron CG42389 + chr2L_5_16550001 chr2L_16550001 RAL-57 378 chr2L 16554545 16554551 chr2L 16554649 16554669 5 113 5.0 4.0 4.5 0.9 124 chr2L 16554545 intron CG42389 + chr2L 16554607 intron CG42389 + chr2L 16554669 intron CG42389 + chr2L_5_16550001 chr2L_16550001 RAL-57 379 chr2L 16594008 16594142 chr2L 16594110 16594257 4 108 0.0 0.0 0.0 4.0 249 chr2L 16594008 intron CG42389 + chr2L 16594132 intron CG42389 + chr2L 16594257 intron CG42389 + chr2L_4_16590001 chr2L_16590001 RAL-57 380 chr2L 16643084 16643120 chr2L 16643193 16643230 5 109 1.0 1.0 1.0 2.5 146 chr2L 16643084 intron CG42389 + chr2L 16643157 intron CG42389 + chr2L 16643230 intron CG42389 + chr2L_5_16640001 chr2L_16640001 RAL-57 381 chr2L 16764955 16764994 chr2L 16765060 16765099 12 105 2.5 3.5 3.0 3.0 144 chr2L 16764955 intergenic not near genes chr2L 16765027 intergenic not near genes chr2L 16765099 intergenic not near genes chr2L_12_16765001 chr2L_16765001 RAL-57 382 chr2L 16217660 16217660 chr2L 16917619 16917619 4 699959 14.0 16.5 15.2 0.2 699959 chr2L 16217660 intergenic not near genes chr2L 16567640 intron CG42389 + chr2L 16917619 intergenic not near genes chr2L_4_16565001 chr2L_16565001 RAL-57 383 chr2L 16952669 16952714 chr2L 16952803 16952848 6 134 0.5 1.5 1.0 3.0 179 chr2L 16952669 intergenic not near genes chr2L 16952758 intergenic not near genes chr2L 16952848 intergenic not near genes chr2L_6_16950001 chr2L_16950001 RAL-57 384 chr2L 16958081 16958127 chr2L 16962894 16962936 Doc 4 4812 2.0 1.0 1.5 1.6 4855 chr2L 16958081 intergenic not near genes chr2L 16960508 intergenic not near genes chr2L 16962936 intergenic not near genes chr2L_4_16960001 chr2L_16960001 RAL-57 385 chr2L 16973736 16973752 chr2L 16974434 16974449 5 697 3.0 5.5 4.2 1.0 713 chr2L 16973736 intron beat-IIIb + chr2L 16974092 intron beat-IIIb + chr2L 16974449 intron beat-IIIb + chr2L_5_16970001 chr2L_16970001 RAL-57 386 chr2L 16973753 16973771 chr2L 16974422 16974470 4 687 2.0 5.5 3.8 0.8 717 chr2L 16973753 intron beat-IIIb + chr2L 16974112 intron beat-IIIb + chr2L 16974470 intron beat-IIIb + chr2L_4_16970001 chr2L_16970001 RAL-57 387 chr2L 17062746 17062784 chr2L 17062850 17062889 5 106 0.5 7.5 4.0 1.0 143 chr2L 17062746 intergenic not near genes chr2L 17062818 intergenic not near genes chr2L 17062889 intergenic not near genes chr2L_5_17060001 chr2L_17060001 RAL-57 388 chr2L 17082876 17082905 chr2L 17083263 17083290 7 387 1.0 1.5 1.2 3.2 414 chr2L 17082876 intergenic not near genes chr2L 17083083 intergenic not near genes chr2L 17083290 intergenic not near genes chr2L_7_17080001 chr2L_17080001 RAL-57 389 chr2L 17087376 17087397 chr2L 17087519 17087540 6 139 2.0 1.5 1.8 2.1 164 chr2L 17087376 intergenic CG12620 + chr2L 17087458 intergenic CG12620 + chr2L 17087540 intergenic CG12620 + chr2L_6_17085001 chr2L_17085001 RAL-57 390 chr2L 17101020 17101072 chr2L 17101524 17101577 5 504 10.5 17.5 14.0 0.3 557 chr2L 17101020 intergenic not near genes chr2L 17101298 intergenic not near genes chr2L 17101577 intergenic not near genes chr2L_5_17100001 chr2L_17100001 RAL-57 391 chr2L 17159833 17159880 chr2L 17159941 17159969 5 94 0.5 1.5 1.0 2.5 136 chr2L 17159833 intron,intron CG34106 +,beat-IIIa + chr2L 17159901 intron,intron CG34106 +,beat-IIIa + chr2L 17159969 intron,intron CG34106 +,beat-IIIa + chr2L_5_17155001 chr2L_17155001 RAL-57 392 chr2L 17168175 17168222 chr2L 17168977 17169025 5 801 0.5 1.5 1.0 2.5 850 chr2L 17168175 intron,intron CG34106 +,beat-IIIa + chr2L 17168600 intron,intron CG34106 +,beat-IIIa + chr2L 17169025 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-57 393 chr2L 17193847 17193870 chr2L 17193959 17193982 9 112 0.0 0.0 0.0 9.0 135 chr2L 17193847 intron beat-IIIc - chr2L 17193914 intron beat-IIIc - chr2L 17193982 intron beat-IIIc - chr2L_9_17190001 chr2L_17190001 RAL-57 394 chr2L 17267058 17267091 chr2L 17267172 17267199 8 114 2.5 2.0 2.2 2.5 141 chr2L 17267058 intergenic not near genes chr2L 17267128 intergenic not near genes chr2L 17267199 intergenic not near genes chr2L_8_17265001 chr2L_17265001 RAL-57 395 chr2L 17273174 17273206 chr2L 17277982 17278014 F-element 5 4806 2.5 3.0 2.8 1.3 4840 chr2L 17273174 intergenic not near genes chr2L 17275594 intergenic not near genes chr2L 17278014 intergenic not near genes chr2L_5_17275001 chr2L_17275001 RAL-57 396 chr2L 17391974 17392014 chr2L 17392082 17392122 4 108 3.5 1.5 2.5 1.1 148 chr2L 17391974 intron CLIP-190 + chr2L 17392048 intron CLIP-190 + chr2L 17392122 intron CLIP-190 + chr2L_4_17390001 chr2L_17390001 RAL-57 397 chr2L 17425760 17425793 chr2L 17425912 17425945 7 152 1.0 1.0 1.0 3.5 185 chr2L 17425760 intron Dif - chr2L 17425852 intron Dif - chr2L 17425945 intron Dif - chr2L_7_17425001 chr2L_17425001 RAL-57 398 chr2L 17432013 17432032 chr2L 17432143 17432163 1360 5 131 0.0 3.5 1.8 1.8 150 chr2L 17432013 intron Dif - chr2L 17432088 intron Dif - chr2L 17432163 intron Dif - chr2L_5_17430001 chr2L_17430001 RAL-57 399 chr2L 17471359 17471369 chr2L 17471690 17471700 8 331 59.0 68.0 63.5 0.1 341 chr2L 17471359 intron BicD - chr2L 17471530 intron BicD - chr2L 17471700 intron,5` UTR BicD -,Sgt + chr2L_8_17470001 chr2L_17470001 RAL-57 400 chr2L 17471353 17471408 chr2L 17471703 17471739 23 336 69.0 66.5 67.8 0.3 386 chr2L 17471353 intron BicD - chr2L 17471546 intron BicD - chr2L 17471739 intron,5` UTR BicD -,Sgt + chr2L_23_17470001 chr2L_17470001 RAL-57 401 chr2L 17564128 17564152 chr2L 17564238 17564262 4 110 2.0 0.5 1.2 1.8 134 chr2L 17564128 intergenic not near genes chr2L 17564195 intergenic not near genes chr2L 17564262 intergenic not near genes chr2L_4_17560001 chr2L_17560001 RAL-57 402 chr2L 17565117 17565151 chr2L 17565235 17565269 4 118 1.0 4.0 2.5 1.1 152 chr2L 17565117 intergenic not near genes chr2L 17565193 intergenic not near genes chr2L 17565269 intergenic not near genes chr2L_4_17565001 chr2L_17565001 RAL-57 403 chr2L 17572299 17572317 chr2L 17572423 17572441 4 124 0.5 1.0 0.8 2.2 142 chr2L 17572299 intergenic not near genes chr2L 17572370 intergenic not near genes chr2L 17572441 intergenic not near genes chr2L_4_17570001 chr2L_17570001 RAL-57 404 chr2L 17635221 17635271 chr2L 17635676 17635706 5 445 3.0 2.5 2.8 1.3 485 chr2L 17635221 intergenic not near genes chr2L 17635464 intergenic not near genes chr2L 17635706 intergenic not near genes chr2L_5_17635001 chr2L_17635001 RAL-57 405 chr2L 17795999 17796042 chr2L 17796105 17796148 25 105 5.0 8.0 6.5 3.3 149 chr2L 17795999 intron CadN2 - chr2L 17796074 intron CadN2 - chr2L 17796148 intron CadN2 - chr2L_25_17795001 chr2L_17795001 RAL-57 406 chr2L 17818415 17818435 chr2L 17818592 17818617 11 178 9.0 6.0 7.5 1.3 202 chr2L 17818415 intron CadN2 - chr2L 17818516 intron CadN2 - chr2L 17818617 intron CadN2 - chr2L_11_17815001 chr2L_17815001 RAL-57 407 chr2L 17818436 17818456 chr2L 17818591 17818595 13 174 6.5 6.0 6.2 1.8 159 chr2L 17818436 intron CadN2 - chr2L 17818516 intron CadN2 - chr2L 17818595 intron CadN2 - chr2L_13_17815001 chr2L_17815001 RAL-57 408 chr2L 17818457 17818462 chr2L 17818590 17818639 4 160 6.5 6.0 6.2 0.6 182 chr2L 17818457 intron CadN2 - chr2L 17818548 intron CadN2 - chr2L 17818639 intron CadN2 - chr2L_4_17815001 chr2L_17815001 RAL-57 409 chr2L 17819901 17819949 chr2L 17825129 17825177 copia 16 5227 5.0 6.5 5.8 2.4 5276 chr2L 17819901 intron CadN2 - chr2L 17822539 intron CadN2 - chr2L 17825177 intron CadN2 - chr2L_16_17820001 chr2L_17820001 RAL-57 410 chr2L 17906740 17906779 chr2L 17906848 17906887 6 108 0.5 3.5 2.0 2.0 147 chr2L 17906740 intergenic not near genes chr2L 17906814 intergenic not near genes chr2L 17906887 intergenic not near genes chr2L_6_17905001 chr2L_17905001 RAL-57 411 chr2L 17951927 17951977 chr2L 17953419 17953469 hobo 15 1492 6.5 3.0 4.8 2.6 1542 chr2L 17951927 intergenic CR44398 -,CR44397 - chr2L 17952698 intergenic not near genes chr2L 17953469 intergenic not near genes chr2L_15_17950001 chr2L_17950001 RAL-57 412 chr2L 17992063 17992095 chr2L 17992341 17992360 4 270 1.0 0.5 0.8 2.2 297 chr2L 17992063 intergenic Prosbeta5R2 + chr2L 17992212 intergenic Prosbeta5R2 + chr2L 17992360 intergenic Prosbeta5R2 + chr2L_4_17990001 chr2L_17990001 RAL-57 413 chr2L 18041410 18041462 chr2L 18041703 18041756 9 292 3.0 1.5 2.2 2.8 346 chr2L 18041410 intron rdo + chr2L 18041583 intron rdo + chr2L 18041756 intron rdo + chr2L_9_18040001 chr2L_18040001 RAL-57 414 chr2L 18051860 18051883 chr2L 18061029 18061055 roo 8 9170 6.5 3.0 4.8 1.4 9195 chr2L 18051860 intron rdo + chr2L 18056458 intron rdo + chr2L 18061055 intron rdo + chr2L_8_18055001 chr2L_18055001 RAL-57 415 chr2L 18165914 18165960 chr2L 18174775 18174821 4 8861 20.5 18.0 19.2 0.2 8907 chr2L 18165914 intron CG42750 - chr2L 18170368 intron CG42750 - chr2L 18174821 intron CG42750 - chr2L_4_18170001 chr2L_18170001 RAL-57 416 chr2L 18230254 18230300 chr2L 18230360 18230409 4 107 2.5 1.5 2.0 1.3 155 chr2L 18230254 intron CG42750 - chr2L 18230332 intron CG42750 - chr2L 18230409 intron CG42750 - chr2L_4_18230001 chr2L_18230001 RAL-57 417 chr2L 18298920 18298948 chr2L 18299012 18299049 13 87 10.0 7.5 8.8 1.3 129 chr2L 18298920 intergenic not near genes chr2L 18298984 intergenic not near genes chr2L 18299049 intergenic not near genes chr2L_13_18295001 chr2L_18295001 RAL-57 418 chr2L 18298952 18298962 chr2L 18299007 18299045 4 78 7.0 8.5 7.8 0.5 93 chr2L 18298952 intergenic not near genes chr2L 18298998 intergenic not near genes chr2L 18299045 intergenic not near genes chr2L_4_18295001 chr2L_18295001 RAL-57 419 chr2L 18312363 18312415 chr2L 18312490 18312542 4 127 1.0 3.5 2.2 1.2 179 chr2L 18312363 intergenic not near genes chr2L 18312452 intergenic not near genes chr2L 18312542 intergenic not near genes chr2L_4_18310001 chr2L_18310001 RAL-57 420 chr2L 18437428 18437470 chr2L 18437778 18437783 7 341 2.5 3.0 2.8 1.8 355 chr2L 18437428 intergenic not near genes chr2L 18437606 intergenic not near genes chr2L 18437783 intergenic not near genes chr2L_7_18435001 chr2L_18435001 RAL-57 421 chr2L 18514506 18514531 chr2L 18514656 18514693 5 158 1.0 2.5 1.8 1.8 187 chr2L 18514506 intergenic not near genes chr2L 18514600 intergenic not near genes chr2L 18514693 intergenic not near genes chr2L_5_18510001 chr2L_18510001 RAL-57 422 chr2L 18555623 18555673 chr2L 18555735 18555785 11 111 2.5 1.5 2.0 3.7 162 chr2L 18555623 intron Pde11 - chr2L 18555704 intron Pde11 - chr2L 18555785 intron Pde11 - chr2L_11_18555001 chr2L_18555001 RAL-57 423 chr2L 16217660 16217660 chr2L 18622426 18622719 9 2404995 14.0 9.5 11.8 0.7 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_9_17420001 chr2L_17420001 RAL-57 424 chr2L 18737066 18737090 chr2L 18737209 18737236 10 146 5.0 8.0 6.5 1.3 170 chr2L 18737066 intergenic not near genes chr2L 18737151 intergenic not near genes chr2L 18737236 intergenic not near genes chr2L_10_18735001 chr2L_18735001 RAL-57 425 chr2L 18766431 18766443 chr2L 18766577 18766589 6 146 10.0 0.0 5.0 1.0 158 chr2L 18766431 intron ham - chr2L 18766510 intron ham - chr2L 18766589 intron ham - chr2L_6_18765001 chr2L_18765001 RAL-57 426 chr2L 18811395 18811438 chr2L 18811502 18811545 9 107 3.5 1.0 2.2 2.8 150 chr2L 18811395 intergenic CG10570 -,CG42502 - chr2L 18811470 intergenic CG10570 -,CG42502 - chr2L 18811545 intergenic not near genes chr2L_9_18810001 chr2L_18810001 RAL-57 427 chr2L 18812532 18812589 chr2L 18812819 18812858 15 286 0.5 4.5 2.5 4.3 326 chr2L 18812532 intergenic CG17325 +,CG42305 + chr2L 18812695 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812858 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_15_18810001 chr2L_18810001 RAL-57 428 chr2L 18898387 18898427 chr2L 18898477 18898534 25 104 6.5 0.0 3.2 6.0 147 chr2L 18898387 intergenic not near genes chr2L 18898460 intergenic not near genes chr2L 18898534 intergenic not near genes chr2L_25_18895001 chr2L_18895001 RAL-57 429 chr2L 18981742 18981777 chr2L 18981842 18981879 5 101 4.0 5.5 4.8 0.9 137 chr2L 18981742 intron Swip-1 - chr2L 18981810 intron Swip-1 - chr2L 18981879 intron Swip-1 - chr2L_5_18980001 chr2L_18980001 RAL-57 430 chr2L 19024096 19024097 chr2L 21768291 21768291 4 2744194 53.0 30.5 41.8 0.1 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_4_20395001 chr2L_20395001 RAL-57 431 chr2L 19121876 19121901 chr2L 19121998 19122023 14 122 6.5 18.0 12.2 1.1 147 chr2L 19121876 3` UTR l(2)37Cc - chr2L 19121950 3` UTR l(2)37Cc - chr2L 19122023 3` UTR l(2)37Cc - chr2L_14_19120001 chr2L_19120001 RAL-57 432 chr2L 19123956 19123984 chr2L 19125353 19125407 20 1398 44.0 94.5 69.2 0.3 1451 chr2L 19123956 intergenic l(2)37Cb -,l(2)37Cc - chr2L 19124682 intron l(2)37Cb - chr2L 19125407 exon l(2)37Cb - chr2L_20_19120001 chr2L_19120001 RAL-57 433 chr2L 19147346 19147398 chr2L 19154406 19154445 297 7 7054 1.0 2.0 1.5 2.8 7099 chr2L 19147346 intron brat + chr2L 19150896 intron brat + chr2L 19154445 intron brat + chr2L_7_19150001 chr2L_19150001 RAL-57 434 chr2L 19201107 19201154 chr2L 19201213 19201261 7 106 1.0 1.0 1.0 3.5 154 chr2L 19201107 intron drl + chr2L 19201184 intron drl + chr2L 19201261 intron drl + chr2L_7_19200001 chr2L_19200001 RAL-57 435 chr2L 19209042 19209084 chr2L 19209160 19209202 18 117 6.0 7.5 6.8 2.3 160 chr2L 19209042 intergenic drl + chr2L 19209122 intergenic not near genes chr2L 19209202 intergenic not near genes chr2L_18_19205001 chr2L_19205001 RAL-57 436 chr2L 19211230 19211281 chr2L 19211365 19211401 10 133 3.0 4.0 3.5 2.2 171 chr2L 19211230 intergenic not near genes chr2L 19211316 intergenic not near genes chr2L 19211401 intergenic not near genes chr2L_10_19210001 chr2L_19210001 RAL-57 437 chr2L 19246803 19246832 chr2L 19246908 19246937 4 105 2.0 4.0 3.0 1.0 134 chr2L 19246803 intergenic not near genes chr2L 19246870 intergenic not near genes chr2L 19246937 intergenic not near genes chr2L_4_19245001 chr2L_19245001 RAL-57 438 chr2L 16217660 16217660 chr2L 19313779 19313782 4 3096121 14.0 36.0 25.0 0.2 3096122 chr2L 16217660 intergenic not near genes chr2L 17765721 intron CadN - chr2L 19313782 intergenic not near genes chr2L_4_17765001 chr2L_17765001 RAL-57 439 chr2L 19345005 19345032 chr2L 19357239 19357266 blood 5 12234 1.0 2.0 1.5 2.0 12261 chr2L 19345005 intron dnt - chr2L 19351136 intron dnt - chr2L 19357266 intron dnt - chr2L_5_19350001 chr2L_19350001 RAL-57 440 chr2L 19365559 19365566 chr2L 19365660 19365667 5 101 0.0 11.0 5.5 0.8 108 chr2L 19365559 intergenic CG13086 + chr2L 19365613 intergenic CG13086 + chr2L 19365667 intergenic CG13086 + chr2L_5_19365001 chr2L_19365001 RAL-57 441 chr2L 19378336 19378367 chr2L 19378422 19378475 9 100 4.0 3.5 3.8 1.9 139 chr2L 19378336 intergenic not near genes chr2L 19378406 intergenic not near genes chr2L 19378475 intergenic not near genes chr2L_9_19375001 chr2L_19375001 RAL-57 442 chr2L 19405598 19405620 chr2L 19405713 19405735 6 114 9.0 3.0 6.0 0.9 137 chr2L 19405598 intron Pax - chr2L 19405666 intron Pax - chr2L 19405735 intron Pax - chr2L_6_19405001 chr2L_19405001 RAL-57 443 chr2L 19406715 19406753 chr2L 19406905 19406942 6 188 4.5 6.0 5.2 1.0 227 chr2L 19406715 intron Pax - chr2L 19406828 intron Pax - chr2L 19406942 intron Pax - chr2L_6_19405001 chr2L_19405001 RAL-57 444 chr2L 19407695 19407739 chr2L 19407917 19407961 10 222 4.5 5.0 4.8 1.7 266 chr2L 19407695 intron Pax - chr2L 19407828 intron Pax - chr2L 19407961 intron Pax - chr2L_10_19405001 chr2L_19405001 RAL-57 445 chr2L 19437499 19437532 chr2L 19437616 19437649 18 116 11.5 11.0 11.2 1.5 150 chr2L 19437499 intron CG10237 - chr2L 19437574 intron CG10237 - chr2L 19437649 intron CG10237 - chr2L_18_19435001 chr2L_19435001 RAL-57 446 chr2L 19544598 19544630 chr2L 19544660 19544667 16 56 22.0 23.0 22.5 0.7 69 chr2L 19544598 exon ref(2)P + chr2L 19544632 exon ref(2)P + chr2L 19544667 exon ref(2)P + chr2L_16_19540001 chr2L_19540001 RAL-57 447 chr2L 19568016 19568072 chr2L 19568130 19568186 36 113 9.5 9.0 9.2 3.5 170 chr2L 19568016 3` UTR spi - chr2L 19568101 3` UTR spi - chr2L 19568186 3` UTR spi - chr2L_36_19565001 chr2L_19565001 RAL-57 448 chr2L 19608582 19608591 chr2L 19608698 19608707 5 116 3.5 0.5 2.0 1.7 125 chr2L 19608582 intron Lar + chr2L 19608644 intron Lar + chr2L 19608707 intron Lar + chr2L_5_19605001 chr2L_19605001 RAL-57 449 chr2L 19620078 19620131 chr2L 19621092 19621133 jockey 9 1009 1.5 1.0 1.2 4.1 1055 chr2L 19620078 intron Lar + chr2L 19620606 intron Lar + chr2L 19621133 intron Lar + chr2L_9_19620001 chr2L_19620001 RAL-57 450 chr2L 19638537 19638572 chr2L 19638636 19638649 4 100 1.5 1.0 1.2 1.8 112 chr2L 19638537 intron Lar + chr2L 19638593 intron Lar + chr2L 19638649 intron Lar + chr2L_4_19635001 chr2L_19635001 RAL-57 451 chr2L 19652554 19652576 chr2L 19674015 19674037 opus 4 21461 4.5 1.0 2.8 1.1 21483 chr2L 19652554 intron Lar + chr2L 19663296 intron Lar + chr2L 19674037 intron Lar + chr2L_4_19660001 chr2L_19660001 RAL-57 452 chr2L 19703516 19703570 chr2L 19712676 19712702 roo 20 9157 5.0 7.0 6.0 2.9 9186 chr2L 19703516 intron Lar + chr2L 19708109 intron Lar + chr2L 19712702 intron Lar + chr2L_20_19705001 chr2L_19705001 RAL-57 453 chr2L 19737352 19737384 chr2L 19740831 19740853 1360 10 3472 4.0 3.5 3.8 2.1 3501 chr2L 19737352 intergenic Nf-YB + chr2L 19739102 intergenic not near genes chr2L 19740853 intergenic not near genes chr2L_10_19735001 chr2L_19735001 RAL-57 454 chr2L 19762782 19762838 chr2L 19763049 19763105 pogo 17 264 7.0 2.5 4.8 2.9 323 chr2L 19762782 exon fbp - chr2L 19762944 intron fbp - chr2L 19763105 intron fbp - chr2L_17_19760001 chr2L_19760001 RAL-57 455 chr2L 19776636 19776657 chr2L 19776741 19776762 8 104 21.5 6.0 13.8 0.5 126 chr2L 19776636 3` UTR CdGAPr - chr2L 19776699 3` UTR CdGAPr - chr2L 19776762 3` UTR CdGAPr - chr2L_8_19775001 chr2L_19775001 RAL-57 456 chr2L 19793994 19794013 chr2L 19794103 19794106 7 107 15.5 7.0 11.2 0.6 112 chr2L 19793994 intron fs(2)ltoPP43 - chr2L 19794050 intron fs(2)ltoPP43 - chr2L 19794106 intron fs(2)ltoPP43 - chr2L_7_19790001 chr2L_19790001 RAL-57 457 chr2L 19794015 19794041 chr2L 19794099 19794150 14 102 7.5 5.5 6.5 1.9 135 chr2L 19794015 intron fs(2)ltoPP43 - chr2L 19794082 intron fs(2)ltoPP43 - chr2L 19794150 intron fs(2)ltoPP43 - chr2L_14_19790001 chr2L_19790001 RAL-57 458 chr2L 19823270 19823293 chr2L 19823381 19823407 5 113 3.5 1.0 2.2 1.6 137 chr2L 19823270 intron sick + chr2L 19823338 intron sick + chr2L 19823407 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-57 459 chr2L 3804544 3804549 chr2L 19845655 19845659 4 16041110 33.5 5.5 19.5 0.2 16041115 chr2L 3804544 intron Reph + chr2L 11825102 intron Pde1c - chr2L 19845659 intron sick + chr2L_4_11825001 chr2L_11825001 RAL-57 460 chr2L 19913041 19913075 chr2L 19913512 19913546 8 470 2.5 0.0 1.2 3.6 505 chr2L 19913041 intron,3` UTR sick +,Victoria - chr2L 19913294 intron,exon sick +,Victoria - chr2L 19913546 intron sick + chr2L_8_19910001 chr2L_19910001 RAL-57 461 chr2L 19973337 19973386 chr2L 19973439 19973487 22 100 7.5 6.5 7.0 2.8 150 chr2L 19973337 intron CG43861 - chr2L 19973412 intron CG43861 - chr2L 19973487 intron CG43861 - chr2L_22_19970001 chr2L_19970001 RAL-57 462 chr2L 19999433 19999477 chr2L 19999705 19999749 6 272 1.5 0.5 1.0 3.0 316 chr2L 19999433 intron CG43861 - chr2L 19999591 intron CG43861 - chr2L 19999749 intron CG43861 - chr2L_6_19995001 chr2L_19995001 RAL-57 463 chr2L 20005855 20005898 chr2L 20010956 20010999 flea 4 5101 2.0 3.0 2.5 1.1 5144 chr2L 20005855 intron CG43861 - chr2L 20008427 intron CG43861 - chr2L 20010999 intron CG43861 - chr2L_4_20005001 chr2L_20005001 RAL-57 464 chr2L 20041405 20041455 chr2L 20041515 20041532 10 100 3.0 3.5 3.2 2.4 127 chr2L 20041405 intron sNPF + chr2L 20041468 intron sNPF + chr2L 20041532 intron sNPF + chr2L_10_20040001 chr2L_20040001 RAL-57 465 chr2L 20079492 20079541 chr2L 20079638 20079686 17 144 6.5 2.5 4.5 3.1 194 chr2L 20079492 intron,intron neb +,fok - chr2L 20079589 intron,intron neb +,fok - chr2L 20079686 intron,intron neb +,fok - chr2L_17_20075001 chr2L_20075001 RAL-57 466 chr2L 20117680 20117725 chr2L 20117786 20117831 4 105 1.0 0.0 0.5 2.7 151 chr2L 20117680 intergenic not near genes chr2L 20117756 intergenic not near genes chr2L 20117831 intergenic not near genes chr2L_4_20115001 chr2L_20115001 RAL-57 467 chr2L 20127466 20127506 chr2L 20127718 20127758 5 251 1.5 0.5 1.0 2.5 292 chr2L 20127466 intergenic not near genes chr2L 20127612 intergenic not near genes chr2L 20127758 intergenic not near genes chr2L_5_20125001 chr2L_20125001 RAL-57 468 chr2L 20259488 20259548 chr2L 20259635 20259669 20 136 3.5 3.5 3.5 4.4 181 chr2L 20259488 intergenic not near genes chr2L 20259578 intergenic not near genes chr2L 20259669 intergenic not near genes chr2L_20_20255001 chr2L_20255001 RAL-57 469 chr2L 20272090 20272143 chr2L 20282826 20282878 copia 24 10735 6.5 9.0 7.8 2.7 10788 chr2L 20272090 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282878 intergenic not near genes chr2L_24_20275001 chr2L_20275001 RAL-57 470 chr2L 20303166 20303186 chr2L 20310654 20310679 blood 10 7492 0.0 10.0 5.0 1.7 7513 chr2L 20303166 intergenic not near genes chr2L 20306922 intergenic not near genes chr2L 20310679 intergenic not near genes chr2L_10_20305001 chr2L_20305001 RAL-57 471 chr2L 20310876 20310881 chr2L 20310981 20310986 4 104 7.5 11.5 9.5 0.4 110 chr2L 20310876 intergenic spir + chr2L 20310931 intergenic spir + chr2L 20310986 intergenic spir + chr2L_4_20310001 chr2L_20310001 RAL-57 472 chr2L 20310884 20310915 chr2L 20310975 20311014 7 101 1.0 9.5 5.2 1.1 130 chr2L 20310884 intergenic spir + chr2L 20310949 intergenic spir + chr2L 20311014 intergenic spir + chr2L_7_20310001 chr2L_20310001 RAL-57 473 chr2L 20372206 20372240 chr2L 20372472 20372506 pogo 9 266 0.5 4.5 2.5 2.6 300 chr2L 20372206 intergenic Ugt37a1 - chr2L 20372356 intergenic Ugt37a1 - chr2L 20372506 exon Ugt37a1 - chr2L_9_20370001 chr2L_20370001 RAL-57 474 chr2L 20407784 20407790 chr2L 20412926 20412947 flea 5 5150 11.0 5.0 8.0 0.6 5163 chr2L 20407784 intron CG10947 - chr2L 20410366 intron CG10947 - chr2L 20412947 intron CG10947 - chr2L_5_20410001 chr2L_20410001 RAL-57 475 chr2L 20486963 20487018 chr2L 20487071 20487126 41 107 7.5 6.0 6.8 5.3 163 chr2L 20486963 5` UTR CR45361 + chr2L 20487044 5` UTR CR45361 + chr2L 20487126 5` UTR CR45361 + chr2L_41_20485001 chr2L_20485001 RAL-57 476 chr2L 20498671 20498708 chr2L 20498795 20498831 12 124 3.0 7.5 5.2 1.9 160 chr2L 20498671 intergenic not near genes chr2L 20498751 intergenic not near genes chr2L 20498831 intergenic not near genes chr2L_12_20495001 chr2L_20495001 RAL-57 477 chr2L 20552765 20552823 chr2L 20553029 20553086 14 256 10.0 9.0 9.5 1.3 321 chr2L 20552765 intergenic not near genes chr2L 20552926 intergenic not near genes chr2L 20553086 intergenic not near genes chr2L_14_20550001 chr2L_20550001 RAL-57 478 chr2L 20568084 20568124 chr2L 20568587 20568627 6 499 2.0 7.0 4.5 1.1 543 chr2L 20568084 intron CR45347 + chr2L 20568356 intron CR45347 + chr2L 20568627 intron CR45347 + chr2L_6_20565001 chr2L_20565001 RAL-57 479 chr2L 20576216 20576236 chr2L 20583709 20583729 blood 4 7492 1.0 4.5 2.8 1.1 7513 chr2L 20576216 intergenic CR45347 + chr2L 20579972 intergenic not near genes chr2L 20583729 3` UTR CR44909 - chr2L_4_20575001 chr2L_20575001 RAL-57 480 chr2L 20601761 20601798 chr2L 20601863 20601901 5 103 3.5 0.5 2.0 1.7 140 chr2L 20601761 intron CR44909 - chr2L 20601831 intron CR44909 - chr2L 20601901 intron CR44909 - chr2L_5_20600001 chr2L_20600001 RAL-57 481 chr2L 20611249 20611258 chr2L 20611327 20611327 9 101 0.5 12.5 6.5 1.2 78 chr2L 20611249 intron CR44909 - chr2L 20611288 intron CR44909 - chr2L 20611327 intron CR44909 - chr2L_9_20610001 chr2L_20610001 RAL-57 482 chr2L 20626082 20626130 chr2L 20626211 20626261 9 129 4.5 1.5 3.0 2.2 179 chr2L 20626082 3` UTR CR44909 - chr2L 20626172 3` UTR CR44909 - chr2L 20626261 intergenic CR44909 - chr2L_9_20625001 chr2L_20625001 RAL-57 483 chr2L 20668666 20668718 chr2L 20668767 20668819 29 101 10.0 6.5 8.2 3.2 153 chr2L 20668666 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668819 intron CG31678 - chr2L_29_20665001 chr2L_20665001 RAL-57 484 chr2L 20674807 20674864 chr2L 20674916 20674967 16 105 3.0 0.0 1.5 6.4 160 chr2L 20674807 intron CG31678 - chr2L 20674887 intron CG31678 - chr2L 20674967 intron CG31678 - chr2L_16_20670001 chr2L_20670001 RAL-57 485 chr2L 20684263 20684292 chr2L 20684368 20684397 7 105 1.5 6.0 3.8 1.5 134 chr2L 20684263 3` UTR Hr38 - chr2L 20684330 3` UTR Hr38 - chr2L 20684397 3` UTR Hr38 - chr2L_7_20680001 chr2L_20680001 RAL-57 486 chr2L 20835788 20835831 chr2L 20836530 20836572 Quasimodo 9 742 2.5 2.5 2.5 2.6 784 chr2L 20835788 5` UTR Oseg5 - chr2L 20836180 intergenic Oseg5 -,Spn38F - chr2L 20836572 intergenic Spn38F - chr2L_9_20835001 chr2L_20835001 RAL-57 487 chr2L 20840002 20840049 chr2L 20840239 20840285 10 236 2.5 2.5 2.5 2.9 283 chr2L 20840002 intergenic not near genes chr2L 20840144 intergenic not near genes chr2L 20840285 intergenic CG31676 + chr2L_10_20840001 chr2L_20840001 RAL-57 488 chr2L 20856868 20856913 chr2L 20856970 20857015 13 102 2.0 7.5 4.8 2.2 147 chr2L 20856868 3` UTR twit + chr2L 20856942 3` UTR twit + chr2L 20857015 3` UTR,3` UTR twit +,CG14400 - chr2L_13_20855001 chr2L_20855001 RAL-57 489 chr2L 20901434 20901460 chr2L 20902623 20902649 1360 4 1189 1.5 2.5 2.0 1.3 1215 chr2L 20901434 intron,intron CG43739 -,sky - chr2L 20902042 intron,intron CG43739 -,sky - chr2L 20902649 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-57 490 chr2L 20984746 20984755 chr2L 20984844 20984872 4 112 2.5 2.0 2.2 1.2 126 chr2L 20984746 intron CG42238 - chr2L 20984809 intron CG42238 - chr2L 20984872 intron CG42238 - chr2L_4_20980001 chr2L_20980001 RAL-57 491 chr2L 21020258 21020292 chr2L 21023960 21023992 NOF 8 3698 2.0 3.5 2.8 2.1 3734 chr2L 21020258 intron CG42238 - chr2L 21022125 intron CG42238 - chr2L 21023992 intron CG42238 - chr2L_8_21020001 chr2L_21020001 RAL-57 492 chr2L 14199219 14199224 chr2L 21034378 21034383 4 6835159 6.0 14.0 10.0 0.4 6835164 chr2L 14199219 intron Dyrk2 - chr2L 17616801 intergenic not near genes chr2L 21034383 intron CG42238 - chr2L_4_17615001 chr2L_17615001 RAL-57 493 chr2L 21074905 21074942 chr2L 21075021 21075058 7 116 1.0 3.5 2.2 2.2 153 chr2L 21074905 intergenic tadr + chr2L 21074982 intergenic tadr + chr2L 21075058 intergenic tadr + chr2L_7_21070001 chr2L_21070001 RAL-57 494 chr2L 21081644 21081668 chr2L 21081803 21081827 5 159 2.0 6.0 4.0 1.0 183 chr2L 21081644 exon CG33511 - chr2L 21081736 exon CG33511 - chr2L 21081827 intron CG33511 - chr2L_5_21080001 chr2L_21080001 RAL-57 495 chr2L 21085035 21085074 chr2L 21085379 21085424 5 348 1.5 2.5 2.0 1.7 389 chr2L 21085035 exon CG33509 - chr2L 21085230 exon CG33509 - chr2L 21085424 exon CG33509 - chr2L_5_21085001 chr2L_21085001 RAL-57 496 chr2L 21091803 21091829 chr2L 21091914 21091940 10 110 2.5 4.5 3.5 2.2 137 chr2L 21091803 intron CG14397 + chr2L 21091872 intron CG14397 + chr2L 21091940 intron CG14397 + chr2L_10_21090001 chr2L_21090001 RAL-57 497 chr2L 21094046 21094088 chr2L 21096474 21096515 7 2428 16.5 5.5 11.0 0.6 2469 chr2L 21094046 intron CG14397 + chr2L 21095280 exon CG12050 - chr2L 21096515 intron CG12050 - chr2L_7_21095001 chr2L_21095001 RAL-57 498 chr2L 21347528 21347565 chr2L 21355024 21355062 blood 4 7497 1.0 1.5 1.2 1.8 7534 chr2L 21347528 intron Tsp39D + chr2L 21351295 intron Tsp39D + chr2L 21355062 intron Tsp39D + chr2L_4_21350001 chr2L_21350001 RAL-57 499 chr2L 21684279 21684303 chr2L 21684567 21684591 4 288 2.0 1.0 1.5 1.6 312 chr2L 21684279 intron CG31619 + chr2L 21684435 intron CG31619 + chr2L 21684591 5` UTR CG31619 + chr2L_4_21680001 chr2L_21680001 RAL-57 500 chr2L 21818989 21819004 chr2L 21819109 21819122 5 119 8.5 5.5 7.0 0.6 133 chr2L 21818989 intergenic CR44786 + chr2L 21819056 intergenic CR44786 + chr2L 21819122 intergenic CR44786 + chr2L_5_21815001 chr2L_21815001 RAL-57 501 chr2L 21901398 21901446 chr2L 21901501 21901549 5 103 1.5 0.5 1.0 2.5 151 chr2L 21901398 intergenic not near genes chr2L 21901474 intergenic not near genes chr2L 21901549 intergenic not near genes chr2L_5_21900001 chr2L_21900001 RAL-57 502 chr2L 21928943 21928995 chr2L 21929184 21929236 15 240 3.5 7.5 5.5 2.3 293 chr2L 21928943 intergenic not near genes chr2L 21929090 intergenic not near genes chr2L 21929236 intergenic not near genes chr2L_15_21925001 chr2L_21925001 RAL-57 503 chr2L 21981680 21981702 chr2L 21990870 21990892 roo 4 9188 1.0 2.0 1.5 1.6 9212 chr2L 21981680 exon CG2528 - chr2L 21986286 intron CG2528 - chr2L 21990892 exon CG2528 - chr2L_4_21985001 chr2L_21985001 RAL-57 504 chr2L 21997551 21997590 chr2L 21997782 21997822 5 228 1.0 0.0 0.5 3.3 271 chr2L 21997551 intergenic not near genes chr2L 21997686 intergenic not near genes chr2L 21997822 intergenic not near genes chr2L_5_21995001 chr2L_21995001 RAL-57 505 chr2L 22035200 22035236 chr2L 22035301 22035337 4 100 0.0 3.5 1.8 1.4 137 chr2L 22035200 intergenic not near genes chr2L 22035268 intergenic not near genes chr2L 22035337 intergenic not near genes chr2L_4_22035001 chr2L_22035001 RAL-57 506 chr2L 22197866 22197907 chr2L 22198090 22198131 5 223 0.0 0.0 0.0 5.0 265 chr2L 22197866 intron Ir40a - chr2L 22197998 intron Ir40a - chr2L 22198131 intron Ir40a - chr2L_5_22195001 chr2L_22195001 RAL-57 507 chr2L 22239410 22239455 chr2L 22239516 22239561 6 106 2.5 1.5 2.0 2.0 151 chr2L 22239410 intron CR43765 - chr2L 22239486 3` UTR CR43765 - chr2L 22239561 3` UTR CR43765 - chr2L_6_22235001 chr2L_22235001 RAL-57 508 chr2L 22258600 22258643 chr2L 22260745 22260792 G6 29 2149 8.5 9.0 8.8 3.0 2192 chr2L 22258600 intergenic Tif-IA + chr2L 22259696 intergenic not near genes chr2L 22260792 intergenic not near genes chr2L_29_22255001 chr2L_22255001 RAL-57 509 chr2L 9723025 9723026 chr2L 22522654 22522655 4 12799629 27.5 0.0 13.8 0.3 12799630 chr2L 9723025 intron Nckx30C - chr2L 16122840 intergenic not near genes chr2L 22522655 intergenic not near genes chr2L_4_16120001 chr2L_16120001 RAL-57 510 chr2L 22696387 22696437 chr2L 22700824 22700874 10 4437 46.5 43.5 45.0 0.2 4487 chr2L 22696387 intron CG40006 - chr2L 22698630 intron CG40006 - chr2L 22700874 intron CG40006 - chr2L_10_22695001 chr2L_22695001 RAL-57 511 chr2L 22776395 22776452 chr2L 22778209 22778264 S-element 12 1814 2.0 2.0 2.0 4.0 1869 chr2L 22776395 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778264 intergenic not near genes chr2L_12_22775001 chr2L_22775001 RAL-57 512 chr2L 23006669 23006699 chr2L 23007001 23007004 6 325 0.5 0.5 0.5 4.0 335 chr2L 23006669 intron Cht3 - chr2L 23006836 intron Cht3 - chr2L 23007004 intron Cht3 - chr2L_6_23005001 chr2L_23005001 RAL-57 513 chr2L 23168862 23168884 chr2L 23168934 23168982 4 92 1.5 2.0 1.8 1.4 120 chr2L 23168862 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168922 intron CG12567 - chr2L 23168982 intron CG12567 - chr2L_4_23165001 chr2L_23165001 RAL-57 514 chr2R 1320204 1320204 chr2R 21358403 21358403 4 20038199 28.5 17.0 22.8 0.2 20038199 chr2R 1320204 intergenic not near genes chr2R 11339304 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_4_11335001 chr2R_11335001 RAL-57 515 chr2R 1516583 1516600 chr2R 1521336 1521353 1731 4 4753 10.5 7.0 8.8 0.4 4770 chr2R 1516583 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521353 5` UTR Maf1 - chr2R_4_1515001 chr2R_1515001 RAL-57 516 chr2R 2110479 2110499 chr2R 2118062 2118082 17.6 12 7583 6.5 3.0 4.8 2.1 7603 chr2R 2110479 intron CG17684 - chr2R 2114280 intron CG17684 - chr2R 2118082 intron CG17684 - chr2R_12_2110001 chr2R_2110001 RAL-57 517 chr2R 2498980 2499014 chr2R 2508152 2508186 roo 4 9172 1.0 1.0 1.0 2.0 9206 chr2R 2498980 intron MFS17 - chr2R 2503583 intron MFS17 - chr2R 2508186 intron MFS17 - chr2R_4_2500001 chr2R_2500001 RAL-57 518 chr2R 3291793 3291929 chr2R 3914992 3915123 6 623194 3.5 4.5 4.0 1.2 623330 chr2R 3291793 intergenic not near genes chr2R 3603458 intergenic not near genes chr2R 3915123 intron uex - chr2R_6_3600001 chr2R_3600001 RAL-57 519 chr2R 4622940 4622985 chr2R 4624115 4624125 1360 5 1173 2.0 1.5 1.8 1.8 1185 chr2R 4622940 intergenic CR44101 - chr2R 4623532 intergenic not near genes chr2R 4624125 intergenic not near genes chr2R_5_4620001 chr2R_4620001 RAL-57 520 chr2R 4783406 4783442 chr2R 4783494 4783542 7 100 5.0 3.5 4.2 1.3 136 chr2R 4783406 intergenic not near genes chr2R 4783474 intergenic not near genes chr2R 4783542 intergenic not near genes chr2R_7_4780001 chr2R_4780001 RAL-57 521 chr2R 4838849 4838900 chr2R 4840396 4840448 transib2 16 1547 9.0 12.0 10.5 1.4 1599 chr2R 4838849 intergenic not near genes chr2R 4839648 intergenic not near genes chr2R 4840448 intergenic not near genes chr2R_16_4835001 chr2R_4835001 RAL-57 522 chr2R 4870719 4870739 chr2R 4871255 4871275 R1A1-element 11 536 7.5 8.0 7.8 1.2 556 chr2R 4870719 intergenic not near genes chr2R 4870997 intergenic not near genes chr2R 4871275 intergenic not near genes chr2R_11_4870001 chr2R_4870001 RAL-57 523 chr2R 5075955 5075986 chr2R 5076092 5076123 5 137 15.5 11.0 13.2 0.4 168 chr2R 5075955 intergenic not near genes chr2R 5076039 intergenic not near genes chr2R 5076123 intergenic not near genes chr2R_5_5075001 chr2R_5075001 RAL-57 524 chr2R 5103034 5103075 chr2R 5103127 5103181 7 99 4.0 2.5 3.2 1.7 147 chr2R 5103034 intergenic not near genes chr2R 5103108 intergenic not near genes chr2R 5103181 intergenic not near genes chr2R_7_5100001 chr2R_5100001 RAL-57 525 chr2R 5363469 5363519 chr2R 5363572 5363622 11 102 2.0 2.5 2.2 3.4 153 chr2R 5363469 5` UTR CR42646 + chr2R 5363546 intron CR42646 + chr2R 5363622 intron CR42646 + chr2R_11_5360001 chr2R_5360001 RAL-57 526 chr2R 5417986 5418014 chr2R 5420643 5420669 Burdock 5 2656 1.5 2.0 1.8 1.8 2683 chr2R 5417986 intron laccase2 + chr2R 5419328 intron laccase2 + chr2R 5420669 intron laccase2 + chr2R_5_5415001 chr2R_5415001 RAL-57 527 chr2R 5472378 5472382 chr2R 5472475 5472501 4 114 5.5 2.5 4.0 0.8 123 chr2R 5472378 intron CG30440 - chr2R 5472440 intron CG30440 - chr2R 5472501 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-57 528 chr2R 5491696 5491732 chr2R 5491862 5491898 4 166 1.5 1.0 1.2 1.8 202 chr2R 5491696 intron CG30440 - chr2R 5491797 intron CG30440 - chr2R 5491898 intron CG30440 - chr2R_4_5490001 chr2R_5490001 RAL-57 529 chr2R 5664256 5664306 chr2R 5664361 5664398 13 102 1.0 2.0 1.5 5.2 142 chr2R 5664256 5` UTR CR45472 + chr2R 5664327 intron CR45472 + chr2R 5664398 intron CR45472 + chr2R_13_5660001 chr2R_5660001 RAL-57 530 chr2R 5837270 5837284 chr2R 5837357 5837365 5 87 3.5 11.0 7.2 0.6 95 chr2R 5837270 intron dpr12 + chr2R 5837318 intron dpr12 + chr2R 5837365 intron dpr12 + chr2R_5_5835001 chr2R_5835001 RAL-57 531 chr2R 5848940 5848991 chr2R 5849066 5849090 22 116 6.0 12.5 9.2 2.2 150 chr2R 5848940 intron dpr12 + chr2R 5849015 intron dpr12 + chr2R 5849090 intron dpr12 + chr2R_22_5845001 chr2R_5845001 RAL-57 532 chr2R 5852006 5852057 chr2R 5852135 5852186 19 126 5.5 4.0 4.8 3.3 180 chr2R 5852006 intron dpr12 + chr2R 5852096 intron dpr12 + chr2R 5852186 intron dpr12 + chr2R_19_5850001 chr2R_5850001 RAL-57 533 chr2R 5861275 5861318 chr2R 5861408 5861445 7 138 5.5 1.5 3.5 1.6 170 chr2R 5861275 intergenic dpr12 + chr2R 5861360 intergenic not near genes chr2R 5861445 intergenic not near genes chr2R_7_5860001 chr2R_5860001 RAL-57 534 chr2R 5869257 5869304 chr2R 5874358 5874399 flea 8 5098 2.0 4.0 3.0 2.0 5142 chr2R 5869257 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874399 intergenic not near genes chr2R_8_5870001 chr2R_5870001 RAL-57 535 chr2R 5876853 5876900 chr2R 5876974 5877013 4 114 4.0 1.0 2.5 1.1 160 chr2R 5876853 intergenic not near genes chr2R 5876933 intergenic not near genes chr2R 5877013 intergenic not near genes chr2R_4_5875001 chr2R_5875001 RAL-57 536 chr2R 5878905 5878947 chr2R 5879010 5879052 6 104 3.0 2.5 2.8 1.6 147 chr2R 5878905 intergenic CG44438 - chr2R 5878978 intergenic CG44438 - chr2R 5879052 intergenic CG44438 - chr2R_6_5875001 chr2R_5875001 RAL-57 537 chr2R 5885342 5885360 chr2R 5885495 5885514 4 154 3.5 0.5 2.0 1.3 172 chr2R 5885342 5` UTR CR44125 + chr2R 5885428 5` UTR CR44125 + chr2R 5885514 5` UTR CR44125 + chr2R_4_5885001 chr2R_5885001 RAL-57 538 chr2R 6096695 6096748 chr2R 6101918 6101944 BS 13 5211 14.0 6.5 10.2 1.2 5249 chr2R 6096695 intron EcR - chr2R 6099320 intron EcR - chr2R 6101944 intron EcR - chr2R_13_6095001 chr2R_6095001 RAL-57 539 chr2R 6151498 6151511 chr2R 6151599 6151611 5 101 5.0 3.0 4.0 1.0 113 chr2R 6151498 intron EcR - chr2R 6151554 intron EcR - chr2R 6151611 intron EcR - chr2R_5_6150001 chr2R_6150001 RAL-57 540 chr2R 6178095 6178131 chr2R 6178246 6178280 14 151 3.5 2.0 2.8 3.7 185 chr2R 6178095 intergenic not near genes chr2R 6178188 intergenic not near genes chr2R 6178280 intergenic not near genes chr2R_14_6175001 chr2R_6175001 RAL-57 541 chr2R 6178660 6178713 chr2R 6178770 6178825 14 112 2.5 3.5 3.0 3.5 165 chr2R 6178660 intergenic not near genes chr2R 6178742 intergenic not near genes chr2R 6178825 intergenic not near genes chr2R_14_6175001 chr2R_6175001 RAL-57 542 chr2R 6194664 6194693 chr2R 6194772 6194796 4 107 5.0 1.0 3.0 1.0 132 chr2R 6194664 intron Ptr - chr2R 6194730 intron Ptr - chr2R 6194796 intron Ptr - chr2R_4_6190001 chr2R_6190001 RAL-57 543 chr2R 6206748 6206796 chr2R 6206849 6206895 18 99 16.0 10.5 13.2 1.3 147 chr2R 6206748 intergenic CG17994 - chr2R 6206822 intergenic CG17994 - chr2R 6206895 intergenic CG17994 - chr2R_18_6205001 chr2R_6205001 RAL-57 544 chr2R 6236702 6236733 chr2R 6236834 6236865 9 132 4.0 8.5 6.2 1.2 163 chr2R 6236702 intron bin3 + chr2R 6236784 intron bin3 + chr2R 6236865 intron bin3 + chr2R_9_6235001 chr2R_6235001 RAL-57 545 chr2R 6494506 6494549 chr2R 6499293 6499336 F-element 12 4787 3.5 1.0 2.2 3.8 4830 chr2R 6494506 intergenic not near genes chr2R 6496921 intergenic not near genes chr2R 6499336 intergenic not near genes chr2R_12_6495001 chr2R_6495001 RAL-57 546 chr2R 6579770 6579801 chr2R 6584881 6584909 flea 7 5111 1.0 3.0 2.0 2.3 5139 chr2R 6579770 intron jing + chr2R 6582340 intron jing + chr2R 6584909 intron jing + chr2R_7_6580001 chr2R_6580001 RAL-57 547 chr2R 6607902 6607957 chr2R 6608029 6608084 15 127 3.5 3.0 3.2 3.6 182 chr2R 6607902 intron jing + chr2R 6607993 intron jing + chr2R 6608084 intron jing + chr2R_15_6605001 chr2R_6605001 RAL-57 548 chr2R 6691101 6691146 chr2R 6691205 6691250 13 104 10.5 7.0 8.8 1.3 149 chr2R 6691101 intron CG9422 + chr2R 6691176 intron CG9422 + chr2R 6691250 intron CG9422 + chr2R_13_6690001 chr2R_6690001 RAL-57 549 chr2R 6696588 6696642 chr2R 6696696 6696723 36 102 13.0 14.0 13.5 2.5 135 chr2R 6696588 5` UTR Mob4 - chr2R 6696656 5` UTR Mob4 - chr2R 6696723 intergenic Rab2 +,Mob4 - chr2R_36_6695001 chr2R_6695001 RAL-57 550 chr2R 6699566 6699620 chr2R 6699676 6699730 17 110 5.0 4.5 4.8 2.9 164 chr2R 6699566 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699730 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_17_6695001 chr2R_6695001 RAL-57 551 chr2R 6712562 6712598 chr2R 6712684 6712720 5 122 3.0 5.0 4.0 1.0 158 chr2R 6712562 intron,intron CG3409 -,CG45092 - chr2R 6712641 intron,intron CG3409 -,CG45092 - chr2R 6712720 intron,intron CG3409 -,CG45092 - chr2R_5_6710001 chr2R_6710001 RAL-57 552 chr2R 6740366 6740409 chr2R 6740483 6740526 13 115 1.5 3.5 2.5 3.7 160 chr2R 6740366 5` UTR l(2)01289 - chr2R 6740446 5` UTR l(2)01289 - chr2R 6740526 5` UTR l(2)01289 - chr2R_13_6740001 chr2R_6740001 RAL-57 553 chr2R 6898288 6898311 chr2R 6898656 6898679 6 368 10.0 7.0 8.5 0.6 391 chr2R 6898288 intron CG30158 + chr2R 6898484 intron CG30158 + chr2R 6898679 intron CG30158 + chr2R_6_6895001 chr2R_6895001 RAL-57 554 chr2R 6898318 6898343 chr2R 6898651 6898679 12 352 5.0 5.0 5.0 2.0 361 chr2R 6898318 intron CG30158 + chr2R 6898498 intron CG30158 + chr2R 6898679 intron CG30158 + chr2R_12_6895001 chr2R_6895001 RAL-57 555 chr2R 6952149 6952183 chr2R 6959754 6959788 opus 13 7605 3.5 3.0 3.2 3.1 7639 chr2R 6952149 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959788 intron,intron mim -,CheB42c - chr2R_13_6955001 chr2R_6955001 RAL-57 556 chr2R 7103357 7103407 chr2R 7103457 7103475 9 86 17.0 10.0 13.5 0.6 118 chr2R 7103357 intron esn + chr2R 7103416 intron esn + chr2R 7103475 intron esn + chr2R_9_7100001 chr2R_7100001 RAL-57 557 chr2R 7196548 7196587 chr2R 7201348 7201387 F-element 24 4800 14.5 0.0 7.2 2.9 4839 chr2R 7196548 intron pk + chr2R 7198968 intron pk + chr2R 7201387 intron pk + chr2R_24_7195001 chr2R_7195001 RAL-57 558 chr2R 7209859 7209873 chr2R 7217643 7217659 roo 15 7786 0.5 19.5 10.0 1.4 7800 chr2R 7209859 intron pk + chr2R 7213759 intron pk + chr2R 7217659 intron pk + chr2R_15_7210001 chr2R_7210001 RAL-57 559 chr2R 7234618 7234641 chr2R 7235495 7235517 7 874 5.0 8.0 6.5 0.9 899 chr2R 7234618 exon Or43a - chr2R 7235068 intergenic Or43a - chr2R 7235517 intergenic not near genes chr2R_7_7235001 chr2R_7235001 RAL-57 560 chr2R 7234642 7234672 chr2R 7235492 7235549 18 870 3.0 7.5 5.2 2.9 907 chr2R 7234642 exon Or43a - chr2R 7235096 intergenic Or43a - chr2R 7235549 intergenic not near genes chr2R_18_7235001 chr2R_7235001 RAL-57 561 chr2R 7235797 7235848 chr2R 7240914 7240952 jockey 21 5111 6.0 5.0 5.5 3.2 5155 chr2R 7235797 intergenic not near genes chr2R 7238374 intergenic not near genes chr2R 7240952 intergenic not near genes chr2R_21_7235001 chr2R_7235001 RAL-57 562 chr2R 7253525 7253557 chr2R 7253865 7253868 16 338 8.5 4.0 6.2 2.2 343 chr2R 7253525 intergenic not near genes chr2R 7253696 intergenic not near genes chr2R 7253868 intergenic not near genes chr2R_16_7250001 chr2R_7250001 RAL-57 563 chr2R 7253558 7253573 chr2R 7253861 7253898 6 331 6.0 3.5 4.8 1.0 340 chr2R 7253558 intergenic not near genes chr2R 7253728 intergenic not near genes chr2R 7253898 intergenic not near genes chr2R_6_7250001 chr2R_7250001 RAL-57 564 chr2R 7262190 7262203 chr2R 7269262 7269289 297 4 7079 6.0 7.5 6.8 0.5 7099 chr2R 7262190 intergenic not near genes chr2R 7265740 intergenic not near genes chr2R 7269289 intergenic not near genes chr2R_4_7265001 chr2R_7265001 RAL-57 565 chr2R 7269833 7269850 chr2R 7273921 7273935 4 4088 97.0 169.5 133.2 0.0 4102 chr2R 7269833 intergenic not near genes chr2R 7271884 intergenic Br140 - chr2R 7273935 exon Br140 - chr2R_4_7270001 chr2R_7270001 RAL-57 566 chr2R 7269831 7269832 chr2R 7273936 7273950 15 4094 85.0 165.5 125.2 0.1 4119 chr2R 7269831 intergenic not near genes chr2R 7271890 intergenic Br140 - chr2R 7273950 exon Br140 - chr2R_15_7270001 chr2R_7270001 RAL-57 567 chr2R 7269830 7269837 chr2R 7273952 7273973 21 4105 88.0 154.0 121.0 0.2 4143 chr2R 7269830 intergenic not near genes chr2R 7271902 intergenic Br140 - chr2R 7273973 exon Br140 - chr2R_21_7270001 chr2R_7270001 RAL-57 568 chr2R 7287621 7287638 chr2R 7287725 7287742 5 104 4.0 1.0 2.5 1.4 121 chr2R 7287621 intron pwn + chr2R 7287682 intron pwn + chr2R 7287742 intron pwn + chr2R_5_7285001 chr2R_7285001 RAL-57 569 chr2R 7294506 7294551 chr2R 7294615 7294657 32 108 9.0 14.5 11.8 2.5 151 chr2R 7294506 intron pwn + chr2R 7294582 intron pwn + chr2R 7294657 intron pwn + chr2R_32_7290001 chr2R_7290001 RAL-57 570 chr2R 7417881 7418164 chr2R 7417992 7418268 23 104 7.0 9.0 8.0 2.6 387 chr2R 7417881 intergenic not near genes chr2R 7418074 intergenic not near genes chr2R 7418268 intergenic not near genes chr2R_23_7415001 chr2R_7415001 RAL-57 571 chr2R 7434872 7434910 chr2R 7439198 7439235 Juan 23 4326 14.0 17.5 15.8 1.4 4363 chr2R 7434872 3` UTR so + chr2R 7437054 intergenic not near genes chr2R 7439235 intergenic not near genes chr2R_23_7435001 chr2R_7435001 RAL-57 572 chr2R 7563085 7563127 chr2R 7563185 7563231 9 103 4.5 4.0 4.2 1.7 146 chr2R 7563085 3` UTR Corin + chr2R 7563158 3` UTR Corin + chr2R 7563231 3` UTR Corin + chr2R_9_7560001 chr2R_7560001 RAL-57 573 chr2R 7598026 7598065 chr2R 7598158 7598197 17 132 4.0 12.5 8.2 1.8 171 chr2R 7598026 intron CG1358 - chr2R 7598112 intron CG1358 - chr2R 7598197 intron CG1358 - chr2R_17_7595001 chr2R_7595001 RAL-57 574 chr2R 7607421 7607473 chr2R 7607528 7607580 13 107 1.0 5.0 3.0 3.2 159 chr2R 7607421 intron CG1358 - chr2R 7607500 intron CG1358 - chr2R 7607580 intron CG1358 - chr2R_13_7605001 chr2R_7605001 RAL-57 575 chr2R 7608388 7608431 chr2R 7613616 7613649 I-element 9 5221 4.5 6.5 5.5 1.4 5261 chr2R 7608388 intron CG1358 - chr2R 7611018 intron CG1358 - chr2R 7613649 intron CG1358 - chr2R_9_7610001 chr2R_7610001 RAL-57 576 chr2R 7623791 7623843 chr2R 7624001 7624055 27 210 8.0 4.5 6.2 3.8 264 chr2R 7623791 intron CG43340 + chr2R 7623923 intron CG43340 + chr2R 7624055 intron CG43340 + chr2R_27_7620001 chr2R_7620001 RAL-57 577 chr2R 7737885 7737904 chr2R 7737989 7738008 14 104 12.5 7.0 9.8 1.3 123 chr2R 7737885 intergenic not near genes chr2R 7737946 intergenic not near genes chr2R 7738008 intergenic not near genes chr2R_14_7735001 chr2R_7735001 RAL-57 578 chr2R 7760280 7760303 chr2R 7760425 7760447 9 151 3.0 4.5 3.8 1.9 167 chr2R 7760280 intron,intron CG30497 -,CG45093 - chr2R 7760364 intron,intron CG30497 -,CG45093 - chr2R 7760447 intron,intron CG30497 -,CG45093 - chr2R_9_7760001 chr2R_7760001 RAL-57 579 chr2R 7815647 7815703 chr2R 7822141 7822182 Burdock 28 6493 9.0 8.0 8.5 2.9 6535 chr2R 7815647 intergenic CG1882 + chr2R 7818914 intergenic not near genes chr2R 7822182 3` UTR cathD - chr2R_28_7815001 chr2R_7815001 RAL-57 580 chr2R 7862207 7862245 chr2R 7867346 7867382 flea 4 5138 3.0 1.0 2.0 1.3 5175 chr2R 7862207 intron Dgk - chr2R 7864794 intron Dgk - chr2R 7867382 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-57 581 chr2R 7869186 7869197 chr2R 7873976 7873982 Doc 4 4798 6.5 3.5 5.0 0.7 4796 chr2R 7869186 intron Dgk - chr2R 7871584 intron Dgk - chr2R 7873982 intron Dgk - chr2R_4_7870001 chr2R_7870001 RAL-57 582 chr2R 7899506 7899508 chr2R 10066494 10066496 5 2166988 20.5 37.0 28.8 0.2 2166990 chr2R 7899506 intron CG30377 + chr2R 8983001 intron CG8213 - chr2R 10066496 5` UTR CG2292 - chr2R_5_8980001 chr2R_8980001 RAL-57 583 chr2R 8006821 8006874 chr2R 8007005 8007058 21 184 6.5 7.5 7.0 2.6 237 chr2R 8006821 intergenic Odc1 +,Odc2 + chr2R 8006940 intergenic Odc1 +,Odc2 + chr2R 8007058 intergenic Odc2 +,Odc1 + chr2R_21_8005001 chr2R_8005001 RAL-57 584 chr2R 8008840 8008887 chr2R 8008962 8009011 27 123 6.0 5.5 5.8 4.0 171 chr2R 8008840 intron Odc2 + chr2R 8008926 exon Odc2 + chr2R 8009011 3` UTR Odc2 + chr2R_27_8005001 chr2R_8005001 RAL-57 585 chr2R 8014101 8014152 chr2R 8014202 8014252 16 100 5.0 3.5 4.2 3.1 151 chr2R 8014101 intergenic CG14762 - chr2R 8014176 intergenic CG14762 - chr2R 8014252 intergenic CG14762 - chr2R_16_8010001 chr2R_8010001 RAL-57 586 chr2R 8015631 8015678 chr2R 8017677 8017720 19 2039 7.0 12.5 9.8 1.8 2089 chr2R 8015631 intergenic mir-4981 + chr2R 8016676 intergenic not near genes chr2R 8017720 intergenic not near genes chr2R_19_8015001 chr2R_8015001 RAL-57 587 chr2R 8197924 8197962 chr2R 8198275 8198312 6 345 3.0 2.0 2.5 1.7 388 chr2R 8197924 intron LRP1 + chr2R 8198118 intron LRP1 + chr2R 8198312 intron LRP1 + chr2R_6_8195001 chr2R_8195001 RAL-57 588 chr2R 8203733 8203775 chr2R 8203850 8203892 21 117 8.0 7.5 7.8 2.4 159 chr2R 8203733 intron LRP1 + chr2R 8203812 intron LRP1 + chr2R 8203892 intron LRP1 + chr2R_21_8200001 chr2R_8200001 RAL-57 589 chr2R 8236015 8236054 chr2R 8236121 8236159 7 105 4.5 3.5 4.0 1.4 144 chr2R 8236015 intergenic not near genes chr2R 8236087 intergenic not near genes chr2R 8236159 intergenic not near genes chr2R_7_8235001 chr2R_8235001 RAL-57 590 chr2R 8328683 8328727 chr2R 8328786 8328804 23 97 5.5 6.0 5.8 3.4 121 chr2R 8328683 intron pdm3 + chr2R 8328744 intron pdm3 + chr2R 8328804 intron pdm3 + chr2R_23_8325001 chr2R_8325001 RAL-57 591 chr2R 8330855 8330888 chr2R 8331352 8331399 roo 13 510 3.0 4.5 3.8 2.7 544 chr2R 8330855 intron pdm3 + chr2R 8331127 intron pdm3 + chr2R 8331399 intron pdm3 + chr2R_13_8330001 chr2R_8330001 RAL-57 592 chr2R 8379761 8379813 chr2R 8379882 8379934 15 118 4.5 3.0 3.8 3.1 173 chr2R 8379761 intron pdm3 + chr2R 8379848 intron pdm3 + chr2R 8379934 intron pdm3 + chr2R_15_8375001 chr2R_8375001 RAL-57 593 chr2R 8398190 8398237 chr2R 8402996 8403043 Doc 23 4802 13.0 11.0 12.0 1.8 4853 chr2R 8398190 intron CG2121 - chr2R 8400616 intron CG2121 - chr2R 8403043 intron CG2121 - chr2R_23_8400001 chr2R_8400001 RAL-57 594 chr2R 8489956 8489967 chr2R 8490067 8490078 5 111 2.0 4.5 3.2 1.2 122 chr2R 8489956 intron mtt - chr2R 8490017 intron mtt - chr2R 8490078 intron mtt - chr2R_5_8490001 chr2R_8490001 RAL-57 595 chr2R 8498041 8498087 chr2R 8498587 8498599 11 536 4.5 4.5 4.5 2.0 558 chr2R 8498041 intron mtt - chr2R 8498320 intron mtt - chr2R 8498599 intron mtt - chr2R_11_8495001 chr2R_8495001 RAL-57 596 chr2R 8518774 8518964 chr2R 12066268 12066424 22 3547492 22.5 0.0 11.2 1.8 3547650 chr2R 8518774 intron mtt - chr2R 10292599 intron CAP + chr2R 12066424 intron CG8888 - chr2R_22_10290001 chr2R_10290001 RAL-57 597 chr2R 8524926 8524978 chr2R 8525090 8525141 16 161 2.5 6.5 4.5 2.9 215 chr2R 8524926 intron mtt - chr2R 8525034 intron mtt - chr2R 8525141 intron mtt - chr2R_16_8525001 chr2R_8525001 RAL-57 598 chr2R 8557427 8557469 chr2R 8557914 8557941 9 488 5.0 3.0 4.0 1.8 514 chr2R 8557427 intergenic not near genes chr2R 8557684 intergenic not near genes chr2R 8557941 intergenic CR45308 - chr2R_9_8555001 chr2R_8555001 RAL-57 599 chr2R 8564256 8564296 chr2R 8565284 8565313 10 1026 20.0 42.0 31.0 0.3 1057 chr2R 8564256 3` UTR Cyp6a14 - chr2R 8564784 intron Cyp6a14 - chr2R 8565313 exon Cyp6a14 - chr2R_10_8560001 chr2R_8560001 RAL-57 600 chr2R 8563670 8563708 chr2R 8565946 8566000 20 2279 40.5 58.5 49.5 0.4 2330 chr2R 8563670 intergenic not near genes chr2R 8564835 exon Cyp6a14 - chr2R 8566000 5` UTR Cyp6a14 - chr2R_20_8560001 chr2R_8560001 RAL-57 601 chr2R 8566039 8566065 chr2R 8567010 8567036 1360 10 971 8.0 10.0 9.0 1.0 997 chr2R 8566039 5` UTR Cyp6a14 - chr2R 8566538 5` UTR Cyp6a14 - chr2R 8567036 5` UTR Cyp6a14 - chr2R_10_8565001 chr2R_8565001 RAL-57 602 chr2R 8658229 8658257 chr2R 8658327 8658331 5 94 4.0 4.0 4.0 1.0 102 chr2R 8658229 intron ptc + chr2R 8658280 intron ptc + chr2R 8658331 intron ptc + chr2R_5_8655001 chr2R_8655001 RAL-57 603 chr2R 8718374 8718392 chr2R 8718710 8718719 7 337 27.0 11.0 19.0 0.3 345 chr2R 8718374 3` UTR CG14767 - chr2R 8718546 3` UTR CG14767 - chr2R 8718719 exon CG14767 - chr2R_7_8715001 chr2R_8715001 RAL-57 604 chr2R 8718394 8718421 chr2R 8718707 8718720 24 316 12.0 11.0 11.5 1.9 326 chr2R 8718394 3` UTR CG14767 - chr2R 8718557 3` UTR CG14767 - chr2R 8718720 exon CG14767 - chr2R_24_8715001 chr2R_8715001 RAL-57 605 chr2R 8722740 8722786 chr2R 8723006 8723008 pogo 10 250 3.0 4.5 3.8 2.1 268 chr2R 8722740 intron CG14767 - chr2R 8722874 intron CG14767 - chr2R 8723008 intron CG14767 - chr2R_10_8720001 chr2R_8720001 RAL-57 606 chr2R 8789706 8789735 chr2R 8789788 8789811 9 78 12.0 7.5 9.8 0.8 105 chr2R 8789706 intergenic not near genes chr2R 8789758 intergenic not near genes chr2R 8789811 intergenic not near genes chr2R_9_8785001 chr2R_8785001 RAL-57 607 chr2R 8824473 8824509 chr2R 8824583 8824619 26 106 29.0 16.5 22.8 1.1 146 chr2R 8824473 intron sns + chr2R 8824546 intron sns + chr2R 8824619 intron sns + chr2R_26_8820001 chr2R_8820001 RAL-57 608 chr2R 8954378 8954435 chr2R 8954491 8954548 32 113 9.5 8.5 9.0 3.2 170 chr2R 8954378 intron babo + chr2R 8954463 intron babo + chr2R 8954548 intron babo + chr2R_32_8950001 chr2R_8950001 RAL-57 609 chr2R 8966129 8966183 chr2R 8966244 8966298 37 115 10.0 13.0 11.5 3.0 169 chr2R 8966129 intron CG8216 - chr2R 8966214 intron CG8216 - chr2R 8966298 intron CG8216 - chr2R_37_8965001 chr2R_8965001 RAL-57 610 chr2R 9031953 9032009 chr2R 9032055 9032111 32 102 9.0 8.0 8.5 3.4 158 chr2R 9031953 intergenic not near genes chr2R 9032032 intergenic not near genes chr2R 9032111 intergenic not near genes chr2R_32_9030001 chr2R_9030001 RAL-57 611 chr2R 9091788 9091846 chr2R 9091918 9091976 25 128 5.0 6.5 5.8 3.7 188 chr2R 9091788 intron CG8080 - chr2R 9091882 intron CG8080 - chr2R 9091976 intron CG8080 - chr2R_25_9090001 chr2R_9090001 RAL-57 612 chr2R 9106284 9106298 chr2R 9106392 9106409 4 110 12.0 20.5 16.2 0.2 125 chr2R 9106284 3` UTR Vang + chr2R 9106346 3` UTR Vang + chr2R 9106409 3` UTR Vang + chr2R_4_9105001 chr2R_9105001 RAL-57 613 chr2R 9106300 9106328 chr2R 9106385 9106439 5 98 4.0 10.0 7.0 0.6 139 chr2R 9106300 3` UTR Vang + chr2R 9106370 3` UTR Vang + chr2R 9106439 3` UTR Vang + chr2R_5_9105001 chr2R_9105001 RAL-57 614 chr2R 9151284 9151333 chr2R 9157779 9157828 Burdock 18 6495 7.5 9.0 8.2 2.0 6544 chr2R 9151284 exon CG30345 + chr2R 9154556 intergenic not near genes chr2R 9157828 intergenic CG8008 - chr2R_18_9150001 chr2R_9150001 RAL-57 615 chr2R 9212680 9212691 chr2R 9213191 9213201 roo 9 510 15.0 3.5 9.2 0.9 521 chr2R 9212680 intergenic CR45309 + chr2R 9212940 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_9_9210001 chr2R_9210001 RAL-57 616 chr2R 9212692 9212724 chr2R 9213184 9213221 roo 11 505 5.5 3.5 4.5 2.0 529 chr2R 9212692 intergenic CR45309 + chr2R 9212956 intergenic CR45309 + chr2R 9213221 5` UTR CR45309 + chr2R_11_9210001 chr2R_9210001 RAL-57 617 chr2R 9218474 9218491 chr2R 9219042 9219082 6 584 8.0 7.0 7.5 0.7 608 chr2R 9218474 intergenic not near genes chr2R 9218778 intergenic not near genes chr2R 9219082 intergenic not near genes chr2R_6_9215001 chr2R_9215001 RAL-57 618 chr2R 9227850 9227904 chr2R 9227962 9228016 40 109 6.0 5.5 5.8 5.9 166 chr2R 9227850 3` UTR hig - chr2R 9227933 3` UTR hig - chr2R 9228016 3` UTR hig - chr2R_40_9225001 chr2R_9225001 RAL-57 619 chr2R 9236581 9236621 chr2R 9236693 9236733 18 112 5.5 4.5 5.0 3.0 152 chr2R 9236581 intron hig - chr2R 9236657 intron hig - chr2R 9236733 intron hig - chr2R_18_9235001 chr2R_9235001 RAL-57 620 chr2R 9368111 9368155 chr2R 9368203 9368238 32 90 9.0 0.0 4.5 5.8 127 chr2R 9368111 intron CG13954 - chr2R 9368174 intron CG13954 - chr2R 9368238 intron CG13954 - chr2R_32_9365001 chr2R_9365001 RAL-57 621 chr2R 9561800 9561849 chr2R 9561912 9561962 15 113 0.0 5.0 2.5 4.3 162 chr2R 9561800 3` UTR,intron CR45281 -,CG1809 + chr2R 9561881 3` UTR,intron CR45281 -,CG1809 + chr2R 9561962 3` UTR,intron CR45281 -,CG1809 + chr2R_15_9560001 chr2R_9560001 RAL-57 622 chr2R 9667229 9667252 chr2R 9667330 9667353 12 101 8.5 5.5 7.0 1.5 124 chr2R 9667229 intron Mmp2 - chr2R 9667291 intron Mmp2 - chr2R 9667353 intron Mmp2 - chr2R_12_9665001 chr2R_9665001 RAL-57 623 chr2R 9667253 9667279 chr2R 9667328 9667380 14 96 5.5 5.5 5.5 2.2 127 chr2R 9667253 intron Mmp2 - chr2R 9667316 intron Mmp2 - chr2R 9667380 exon Mmp2 - chr2R_14_9665001 chr2R_9665001 RAL-57 624 chr2R 9672033 9672082 chr2R 9672163 9672211 6 130 1.0 2.5 1.8 2.1 178 chr2R 9672033 intron Mmp2 - chr2R 9672122 intron Mmp2 - chr2R 9672211 intron Mmp2 - chr2R_6_9670001 chr2R_9670001 RAL-57 625 chr2R 9859200 9859234 chr2R 9861525 9861575 6 2328 21.0 13.5 17.2 0.3 2375 chr2R 9859200 intron CG1516 - chr2R 9860388 intron CG1516 - chr2R 9861575 intergenic CR44293 +,CG1516 - chr2R_6_9860001 chr2R_9860001 RAL-57 626 chr2R 9871019 9871070 chr2R 9871530 9871567 roo 13 509 4.0 5.0 4.5 2.4 548 chr2R 9871019 intron cbx - chr2R 9871293 intron cbx - chr2R 9871567 intron,5` UTR cbx -,CG18446 + chr2R_13_9870001 chr2R_9870001 RAL-57 627 chr2R 9863530 9863582 chr2R 9873442 9873493 INE-1 8 9912 18.5 16.5 17.5 0.4 9963 chr2R 9863530 intergenic CG30010 + chr2R 9868512 intron,5` UTR cbx -,CR45138 + chr2R 9873493 intron,3` UTR cbx -,CG18446 + chr2R_8_9865001 chr2R_9865001 RAL-57 628 chr2R 10001496 10001547 chr2R 10001602 10001653 24 104 4.0 7.5 5.8 3.5 157 chr2R 10001496 intron Pka-R2 - chr2R 10001574 intron Pka-R2 - chr2R 10001653 intron Pka-R2 - chr2R_24_10000001 chr2R_10000001 RAL-57 629 chr2R 10005534 10005568 chr2R 10005656 10005690 5 122 5.5 2.5 4.0 1.0 156 chr2R 10005534 intron Pka-R2 - chr2R 10005612 intron Pka-R2 - chr2R 10005690 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-57 630 chr2R 10005846 10005865 chr2R 10007013 10007055 1360 5 1180 8.0 4.0 6.0 0.7 1209 chr2R 10005846 intron Pka-R2 - chr2R 10006450 intron Pka-R2 - chr2R 10007055 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-57 631 chr2R 10005869 10005879 chr2R 10007011 10007057 1360 5 1154 6.5 2.5 4.5 0.9 1188 chr2R 10005869 intron Pka-R2 - chr2R 10006463 intron Pka-R2 - chr2R 10007057 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-57 632 chr2R 10059238 10059294 chr2R 10059652 10059667 26 405 5.5 11.0 8.2 2.8 429 chr2R 10059238 intron magu + chr2R 10059452 intron magu + chr2R 10059667 intron magu + chr2R_26_10055001 chr2R_10055001 RAL-57 633 chr2R 10086896 10086934 chr2R 10087015 10087056 22 119 12.0 8.0 10.0 2.0 160 chr2R 10086896 intron,exon CG2269 +,sut4 - chr2R 10086976 intron,5` UTR CG2269 +,sut4 - chr2R 10087056 intron,5` UTR CG2269 +,sut4 - chr2R_22_10085001 chr2R_10085001 RAL-57 634 chr2R 10107159 10107202 chr2R 10107270 10107314 7 112 4.0 3.0 3.5 1.6 155 chr2R 10107159 intron 14-3-3zeta + chr2R 10107236 intron 14-3-3zeta + chr2R 10107314 intron 14-3-3zeta + chr2R_7_10105001 chr2R_10105001 RAL-57 635 chr2R 10122719 10122749 chr2R 10122954 10122984 8 234 4.0 4.5 4.2 1.5 265 chr2R 10122719 intergenic Ccs - chr2R 10122852 intergenic Ccs - chr2R 10122984 intergenic Ccs - chr2R_8_10120001 chr2R_10120001 RAL-57 636 chr2R 10132164 10132220 chr2R 10132269 10132309 22 102 8.0 4.5 6.2 3.1 145 chr2R 10132164 intron gem + chr2R 10132236 intron gem + chr2R 10132309 exon gem + chr2R_22_10130001 chr2R_10130001 RAL-57 637 chr2R 10147620 10147672 chr2R 10147728 10147780 21 108 11.5 8.5 10.0 1.9 160 chr2R 10147620 intron KCNQ - chr2R 10147700 intron KCNQ - chr2R 10147780 intron KCNQ - chr2R_21_10145001 chr2R_10145001 RAL-57 638 chr2R 10176860 10176901 chr2R 10186052 10186093 roo 5 9192 1.0 1.0 1.0 2.5 9233 chr2R 10176860 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186093 intron KCNQ - chr2R_5_10180001 chr2R_10180001 RAL-57 639 chr2R 10189189 10189222 chr2R 10189292 10189325 6 103 2.5 5.0 3.8 1.2 136 chr2R 10189189 intron KCNQ - chr2R 10189257 intron KCNQ - chr2R 10189325 intron KCNQ - chr2R_6_10185001 chr2R_10185001 RAL-57 640 chr2R 10221653 10221677 chr2R 10221760 10221774 9 105 16.0 0.0 8.0 1.0 121 chr2R 10221653 intron,intron CG12912 -,Hr46 - chr2R 10221714 intron,intron CG12912 -,Hr46 - chr2R 10221774 intron,intron CG12912 -,Hr46 - chr2R_9_10220001 chr2R_10220001 RAL-57 641 chr2R 10224104 10224131 chr2R 10224228 10224255 13 124 2.5 5.0 3.8 2.7 151 chr2R 10224104 intron,intron CG12912 -,Hr46 - chr2R 10224180 intron,intron CG12912 -,Hr46 - chr2R 10224255 intron,intron CG12912 -,Hr46 - chr2R_13_10220001 chr2R_10220001 RAL-57 642 chr2R 10232944 10232961 chr2R 10233008 10233037 11 69 12.5 23.0 17.8 0.6 93 chr2R 10232944 3` UTR,intron CG12912 -,Hr46 - chr2R 10232990 3` UTR,intron CG12912 -,Hr46 - chr2R 10233037 3` UTR,intron CG12912 -,Hr46 - chr2R_11_10230001 chr2R_10230001 RAL-57 643 chr2R 10266480 10266493 chr2R 10266596 10266609 7 116 25.5 9.5 17.5 0.4 129 chr2R 10266480 intron CG12910 + chr2R 10266544 intron CG12910 + chr2R 10266609 intron CG12910 + chr2R_7_10265001 chr2R_10265001 RAL-57 644 chr2R 10266496 10266530 chr2R 10266587 10266618 11 92 11.0 6.5 8.8 1.1 122 chr2R 10266496 intron CG12910 + chr2R 10266557 intron CG12910 + chr2R 10266618 intron CG12910 + chr2R_11_10265001 chr2R_10265001 RAL-57 645 chr2R 10274811 10274822 chr2R 10274902 10274923 4 98 3.0 0.0 1.5 1.6 112 chr2R 10274811 intron CAP + chr2R 10274867 intron CAP + chr2R 10274923 intron CAP + chr2R_4_10270001 chr2R_10270001 RAL-57 646 chr2R 10290089 10290142 chr2R 10290195 10290248 21 106 6.5 3.5 5.0 3.5 159 chr2R 10290089 intron CAP + chr2R 10290168 intron CAP + chr2R 10290248 intron CAP + chr2R_21_10290001 chr2R_10290001 RAL-57 647 chr2R 10313298 10313348 chr2R 10313409 10313461 12 112 2.5 4.5 3.5 2.7 163 chr2R 10313298 intergenic not near genes chr2R 10313380 intergenic not near genes chr2R 10313461 intergenic Ndg + chr2R_12_10310001 chr2R_10310001 RAL-57 648 chr2R 10376215 10376263 chr2R 10376329 10376377 6 114 1.0 1.5 1.2 2.7 162 chr2R 10376215 intron CG42732 - chr2R 10376296 intron CG42732 - chr2R 10376377 intron CG42732 - chr2R_6_10375001 chr2R_10375001 RAL-57 649 chr2R 10387979 10388003 chr2R 10388096 10388125 14 119 0.0 26.5 13.2 1.0 146 chr2R 10387979 intron CG42732 - chr2R 10388052 intron CG42732 - chr2R 10388125 intron CG42732 - chr2R_14_10385001 chr2R_10385001 RAL-57 650 chr2R 10409038 10409083 chr2R 10409140 10409184 9 101 0.0 2.0 1.0 4.5 146 chr2R 10409038 intron CG42732 - chr2R 10409111 intron CG42732 - chr2R 10409184 intron,exon CG42732 -,CG33477 - chr2R_9_10405001 chr2R_10405001 RAL-57 651 chr2R 10443420 10443460 chr2R 10443545 10443582 9 125 0.0 0.0 0.0 9.0 162 chr2R 10443420 intron Galphao + chr2R 10443501 intron Galphao + chr2R 10443582 intron Galphao + chr2R_9_10440001 chr2R_10440001 RAL-57 652 chr2R 10454075 10454100 chr2R 10454177 10454198 11 100 15.5 12.0 13.8 0.7 123 chr2R 10454075 intron,intron Galphao +,Cyp49a1 - chr2R 10454136 intron,intron Galphao +,Cyp49a1 - chr2R 10454198 intron,intron Galphao +,Cyp49a1 - chr2R_11_10450001 chr2R_10450001 RAL-57 653 chr2R 10454101 10454129 chr2R 10454175 10454231 11 95 8.5 10.5 9.5 1.0 130 chr2R 10454101 intron,intron Galphao +,Cyp49a1 - chr2R 10454166 intron,intron Galphao +,Cyp49a1 - chr2R 10454231 intron,intron Galphao +,Cyp49a1 - chr2R_11_10450001 chr2R_10450001 RAL-57 654 chr2R 10485877 10485914 chr2R 10485981 10486018 4 104 6.5 0.0 3.2 1.0 141 chr2R 10485877 intron lola - chr2R 10485948 intron lola - chr2R 10486018 intron lola - chr2R_4_10485001 chr2R_10485001 RAL-57 655 chr2R 10571990 10572043 chr2R 10572206 10572260 13 216 3.5 2.0 2.8 3.4 270 chr2R 10571990 intron psq + chr2R 10572125 intron psq + chr2R 10572260 intron psq + chr2R_13_10570001 chr2R_10570001 RAL-57 656 chr2R 10585578 10585588 chr2R 10594179 10594196 Tirant 5 8605 5.5 4.0 4.8 0.9 8618 chr2R 10585578 intron psq + chr2R 10589887 intron psq + chr2R 10594196 intron psq + chr2R_5_10585001 chr2R_10585001 RAL-57 657 chr2R 10653179 10653227 chr2R 10653283 10653330 8 98 7.5 2.5 5.0 1.3 151 chr2R 10653179 intergenic not near genes chr2R 10653254 intergenic not near genes chr2R 10653330 intergenic not near genes chr2R_8_10650001 chr2R_10650001 RAL-57 658 chr2R 10742408 10742451 chr2R 10742617 10742660 18 204 8.5 6.5 7.5 2.1 252 chr2R 10742408 intron CG33144 - chr2R 10742534 intron CG33144 - chr2R 10742660 intron CG33144 - chr2R_18_10740001 chr2R_10740001 RAL-57 659 chr2R 10765168 10765200 chr2R 10765536 10765568 14 365 10.5 9.5 10.0 1.3 400 chr2R 10765168 intron CG33144 - chr2R 10765368 intron CG33144 - chr2R 10765568 intron CG33144 - chr2R_14_10765001 chr2R_10765001 RAL-57 660 chr2R 10799131 10799186 chr2R 10799239 10799294 32 108 9.5 5.5 7.5 3.8 163 chr2R 10799131 intergenic CG33144 - chr2R 10799212 intergenic not near genes chr2R 10799294 intergenic not near genes chr2R_32_10795001 chr2R_10795001 RAL-57 661 chr2R 10959079 10959109 chr2R 10959182 10959213 7 103 1.0 4.5 2.8 1.8 134 chr2R 10959079 intergenic not near genes chr2R 10959146 intergenic not near genes chr2R 10959213 intergenic not near genes chr2R_7_10955001 chr2R_10955001 RAL-57 662 chr2R 10979653 10979672 chr2R 10980129 10980167 297 5 490 3.5 5.0 4.2 1.0 514 chr2R 10979653 intergenic not near genes chr2R 10979910 intergenic not near genes chr2R 10980167 intergenic not near genes chr2R_5_10975001 chr2R_10975001 RAL-57 663 chr2R 10987190 10987230 chr2R 10987498 10987538 15 307 0.0 1.0 0.5 10.0 348 chr2R 10987190 intron luna - chr2R 10987364 intron luna - chr2R 10987538 intron luna - chr2R_15_10985001 chr2R_10985001 RAL-57 664 chr2R 11194743 11194784 chr2R 11194876 11194916 10 133 10.5 6.0 8.2 1.1 173 chr2R 11194743 intron shn + chr2R 11194830 intron shn + chr2R 11194916 intron shn + chr2R_10_11190001 chr2R_11190001 RAL-57 665 chr2R 11207798 11207847 chr2R 11208016 11208020 BS 19 214 5.0 7.5 6.2 2.6 222 chr2R 11207798 intron shn + chr2R 11207909 intron shn + chr2R 11208020 intron shn + chr2R_19_11205001 chr2R_11205001 RAL-57 666 chr2R 11216600 11216654 chr2R 11216709 11216763 25 109 7.0 5.0 6.0 3.6 163 chr2R 11216600 3` UTR shn + chr2R 11216682 3` UTR shn + chr2R 11216763 3` UTR shn + chr2R_25_11215001 chr2R_11215001 RAL-57 667 chr2R 11263831 11263839 chr2R 11263972 11263980 5 141 0.0 9.5 4.8 0.9 149 chr2R 11263831 intergenic not near genes chr2R 11263906 intergenic not near genes chr2R 11263980 intergenic not near genes chr2R_5_11260001 chr2R_11260001 RAL-57 668 chr2R 11276778 11276811 chr2R 11276971 11276992 8 191 2.0 5.5 3.8 1.7 214 chr2R 11276778 intergenic not near genes chr2R 11276885 intergenic not near genes chr2R 11276992 intergenic not near genes chr2R_8_11275001 chr2R_11275001 RAL-57 669 chr2R 11297621 11297641 chr2R 11301970 11301990 flea 7 4349 5.0 0.0 2.5 2.0 4369 chr2R 11297621 intergenic CG42336 - chr2R 11299806 intergenic not near genes chr2R 11301990 5` UTR CG7741 + chr2R_7_11295001 chr2R_11295001 RAL-57 670 chr2R 11344146 11344159 chr2R 11344264 11344280 8 120 0.0 22.0 11.0 0.7 134 chr2R 11344146 intergenic alphaTry - chr2R 11344213 intergenic alphaTry - chr2R 11344280 3` UTR alphaTry - chr2R_8_11340001 chr2R_11340001 RAL-57 671 chr2R 11415520 11415541 chr2R 11418694 11418713 opus 4 3172 1.0 5.5 3.2 1.0 3193 chr2R 11415520 intron Drip - chr2R 11417116 intron Drip - chr2R 11418713 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-57 672 chr2R 11472627 11472676 chr2R 11473847 11473894 pogo 28 1221 5.0 4.5 4.8 4.8 1267 chr2R 11472627 intergenic not near genes chr2R 11473260 intergenic not near genes chr2R 11473894 intergenic not near genes chr2R_28_11470001 chr2R_11470001 RAL-57 673 chr2R 11494576 11494632 chr2R 11494689 11494746 12 110 2.0 3.0 2.5 3.4 170 chr2R 11494576 intron inv + chr2R 11494661 intron inv + chr2R 11494746 intron inv + chr2R_12_11490001 chr2R_11490001 RAL-57 674 chr2R 11614611 11614799 chr2R 11614724 11614911 21 112 6.0 6.5 6.2 2.9 300 chr2R 11614611 intron tou - chr2R 11614761 intron tou - chr2R 11614911 intron tou - chr2R_21_11610001 chr2R_11610001 RAL-57 675 chr2R 11672831 11672846 chr2R 11672943 11672958 7 112 4.5 7.5 6.0 1.0 127 chr2R 11672831 intron,exon Roc2 -,Tret1-1 + chr2R 11672894 intron,intron Roc2 -,Tret1-1 + chr2R 11672958 intron,intron Roc2 -,Tret1-1 + chr2R_7_11670001 chr2R_11670001 RAL-57 676 chr2R 11680158 11680189 chr2R 11680750 11680781 4 592 0.5 2.5 1.5 1.6 623 chr2R 11680158 intron Buffy + chr2R 11680470 intron Buffy + chr2R 11680781 intron Buffy + chr2R_4_11680001 chr2R_11680001 RAL-57 677 chr2R 11724132 11724182 chr2R 11724242 11724295 14 111 5.5 8.0 6.8 1.8 163 chr2R 11724132 intron pyr + chr2R 11724214 intron pyr + chr2R 11724295 intron pyr + chr2R_14_11720001 chr2R_11720001 RAL-57 678 chr2R 11826862 11826919 chr2R 11826999 11827056 25 137 6.0 4.0 5.0 4.2 194 chr2R 11826862 3` UTR CG13192 + chr2R 11826959 3` UTR CG13192 + chr2R 11827056 3` UTR CG13192 + chr2R_25_11825001 chr2R_11825001 RAL-57 679 chr2R 11863832 11863886 chr2R 11863944 11863998 14 112 7.0 6.5 6.8 1.8 166 chr2R 11863832 intergenic CG42531 + chr2R 11863915 intergenic CG42531 + chr2R 11863998 intergenic CG42531 + chr2R_14_11860001 chr2R_11860001 RAL-57 680 chr2R 11932552 11932571 chr2R 11932691 11932709 4 140 5.5 2.5 4.0 0.8 157 chr2R 11932552 intergenic not near genes chr2R 11932630 intergenic not near genes chr2R 11932709 intergenic not near genes chr2R_4_11930001 chr2R_11930001 RAL-57 681 chr2R 12057653 12057711 chr2R 12057791 12057848 43 137 8.0 0.5 4.2 8.3 195 chr2R 12057653 intron Drep-3 + chr2R 12057750 intron Drep-3 + chr2R 12057848 intron Drep-3 + chr2R_43_12055001 chr2R_12055001 RAL-57 682 chr2R 8518771 8518963 chr2R 12066147 12066287 24 3547374 23.0 55.0 39.0 0.6 3547516 chr2R 8518771 intron mtt - chr2R 10292529 intron CAP + chr2R 12066287 intron CG8888 - chr2R_24_10290001 chr2R_10290001 RAL-57 683 chr2R 12093932 12093980 chr2R 12094070 12094118 11 136 1.5 3.5 2.5 3.1 186 chr2R 12093932 intron jeb - chr2R 12094025 intron jeb - chr2R 12094118 intron jeb - chr2R_11_12090001 chr2R_12090001 RAL-57 684 chr2R 12120387 12120437 chr2R 12120490 12120524 37 96 14.5 17.0 15.8 2.2 137 chr2R 12120387 intergenic not near genes chr2R 12120456 intergenic not near genes chr2R 12120524 intergenic not near genes chr2R_37_12120001 chr2R_12120001 RAL-57 685 chr2R 12124804 12124861 chr2R 12124913 12124913 15 103 3.5 0.5 2.0 5.0 109 chr2R 12124804 intergenic not near genes chr2R 12124858 intergenic not near genes chr2R 12124913 intergenic not near genes chr2R_15_12120001 chr2R_12120001 RAL-57 686 chr2R 12185976 12186037 chr2R 12186096 12186127 28 116 1.5 5.0 3.2 6.7 151 chr2R 12185976 intron Cyp6g1 + chr2R 12186052 intron Cyp6g1 + chr2R 12186127 intron Cyp6g1 + chr2R_28_12185001 chr2R_12185001 RAL-57 687 chr2R 12185222 12185242 chr2R 12188122 12188142 7 2901 35.0 243.0 139.0 0.1 2920 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188142 3` UTR Cyp6g1 + chr2R_7_12185001 chr2R_12185001 RAL-57 688 chr2R 12189380 12189405 chr2R 12189598 12189605 5 210 268.5 265.5 267.0 0.0 225 chr2R 12189380 exon Cyp6g2 - chr2R 12189492 exon Cyp6g2 - chr2R 12189605 exon Cyp6g2 - chr2R_5_12185001 chr2R_12185001 RAL-57 689 chr2R 12187477 12187497 chr2R 12190069 12190089 19 2593 194.5 255.0 224.8 0.1 2612 chr2R 12187477 exon Cyp6g1 + chr2R 12188783 exon Cyp6g2 - chr2R 12190089 exon Cyp6g2 - chr2R_19_12185001 chr2R_12185001 RAL-57 690 chr2R 12187473 12187517 chr2R 12190090 12190108 30 2607 230.0 226.0 228.0 0.1 2635 chr2R 12187473 exon Cyp6g1 + chr2R 12188790 exon Cyp6g2 - chr2R 12190108 exon Cyp6g2 - chr2R_30_12185001 chr2R_12185001 RAL-57 691 chr2R 12187471 12187533 chr2R 12190109 12190124 45 2610 237.0 193.5 215.2 0.2 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_45_12185001 chr2R_12185001 RAL-57 692 chr2R 12302224 12302268 chr2R 12302328 12302374 5 103 4.5 2.5 3.5 1.1 150 chr2R 12302224 5` UTR CG8850 - chr2R 12302299 intergenic CG8850 -,SIP2 - chr2R 12302374 intergenic CG8850 -,SIP2 - chr2R_5_12300001 chr2R_12300001 RAL-57 693 chr2R 12319542 12319585 chr2R 12321113 12321151 13 1571 4.5 2.0 3.2 3.1 1609 chr2R 12319542 intergenic not near genes chr2R 12320346 intergenic CR44316 - chr2R 12321151 intergenic CG13163 +,CR44316 - chr2R_13_12320001 chr2R_12320001 RAL-57 694 chr2R 12363360 12363377 chr2R 12363817 12363833 6 455 2.0 2.0 2.0 2.0 473 chr2R 12363360 intergenic CG30043 + chr2R 12363596 intergenic CG30043 + chr2R 12363833 intergenic not near genes chr2R_6_12360001 chr2R_12360001 RAL-57 695 chr2R 12479107 12479152 chr2R 12479220 12479236 10 100 5.5 8.5 7.0 1.2 129 chr2R 12479107 intron Dh44-R2 + chr2R 12479172 intron Dh44-R2 + chr2R 12479236 intron Dh44-R2 + chr2R_10_12475001 chr2R_12475001 RAL-57 696 chr2R 12481154 12481170 chr2R 12482943 12482974 roo 10 1801 6.0 18.0 12.0 0.8 1820 chr2R 12481154 exon Dh44-R2 + chr2R 12482064 intron Dh44-R2 + chr2R 12482974 intron Dh44-R2 + chr2R_10_12480001 chr2R_12480001 RAL-57 697 chr2R 12492075 12492095 chr2R 12492185 12492214 8 112 18.5 3.5 11.0 0.7 139 chr2R 12492075 intron fdl - chr2R 12492144 intron fdl - chr2R 12492214 intron fdl - chr2R_8_12490001 chr2R_12490001 RAL-57 698 chr2R 12492099 12492124 chr2R 12492183 12492237 11 97 8.5 1.5 5.0 1.8 138 chr2R 12492099 intron fdl - chr2R 12492168 intron fdl - chr2R 12492237 intron fdl - chr2R_11_12490001 chr2R_12490001 RAL-57 699 chr2R 12501698 12501721 chr2R 12503848 12503908 Rt1c 20 2172 9.0 11.5 10.2 1.8 2210 chr2R 12501698 intron fdl - chr2R 12502803 intron fdl - chr2R 12503908 intron fdl - chr2R_20_12500001 chr2R_12500001 RAL-57 700 chr2R 12504127 12504179 chr2R 12504229 12504264 62 98 11.0 14.5 12.8 4.5 137 chr2R 12504127 intron fdl - chr2R 12504196 intron fdl - chr2R 12504264 intron fdl - chr2R_62_12500001 chr2R_12500001 RAL-57 701 chr2R 12527270 12527292 chr2R 12527500 12527526 4 233 2.0 3.5 2.8 1.1 256 chr2R 12527270 intergenic not near genes chr2R 12527398 intergenic not near genes chr2R 12527526 intergenic not near genes chr2R_4_12525001 chr2R_12525001 RAL-57 702 chr2R 12565556 12565597 chr2R 12565963 12566005 18 408 2.0 9.0 5.5 2.8 449 chr2R 12565556 intergenic not near genes chr2R 12565780 intergenic Cyp301a1 + chr2R 12566005 intergenic Cyp301a1 + chr2R_18_12565001 chr2R_12565001 RAL-57 703 chr2R 12608353 12608404 chr2R 12608462 12608513 12 109 2.5 0.5 1.5 4.8 160 chr2R 12608353 intron Amph + chr2R 12608433 intron Amph + chr2R 12608513 intron Amph + chr2R_12_12605001 chr2R_12605001 RAL-57 704 chr2R 12612307 12612341 chr2R 12612425 12612459 6 116 0.0 3.5 1.8 2.1 152 chr2R 12612307 intergenic Amph +,CG45086 +,Galphaq + chr2R 12612383 intergenic Amph +,CG45086 +,Galphaq + chr2R 12612459 intergenic CG45086 +,Galphaq +,Amph + chr2R_6_12610001 chr2R_12610001 RAL-57 705 chr2R 12670563 12670571 chr2R 12670841 12670849 4 278 28.5 26.5 27.5 0.1 286 chr2R 12670563 3` UTR CG42708 - chr2R 12670706 3` UTR CG42708 - chr2R 12670849 3` UTR CG42708 - chr2R_4_12670001 chr2R_12670001 RAL-57 706 chr2R 12677377 12677408 chr2R 12677486 12677517 11 109 0.0 4.5 2.2 3.4 140 chr2R 12677377 intron CG42708 - chr2R 12677447 intron CG42708 - chr2R 12677517 intron CG42708 - chr2R_11_12675001 chr2R_12675001 RAL-57 707 chr2R 12695221 12695259 chr2R 12695332 12695351 7 107 8.0 0.0 4.0 1.4 130 chr2R 12695221 intergenic not near genes chr2R 12695286 intergenic not near genes chr2R 12695351 intergenic not near genes chr2R_7_12695001 chr2R_12695001 RAL-57 708 chr2R 12728851 12728893 chr2R 12728978 12729016 6 124 0.0 1.0 0.5 4.0 165 chr2R 12728851 intron CG42663 + chr2R 12728934 intron CG42663 + chr2R 12729016 intron CG42663 + chr2R_6_12725001 chr2R_12725001 RAL-57 709 chr2R 12789284 12789287 chr2R 12797658 12797674 roo 5 8382 0.5 4.5 2.5 1.4 8390 chr2R 12789284 intron,3` UTR sca +,CR45137 - chr2R 12793479 intron,intron sca +,CR45137 - chr2R 12797674 intron,3` UTR sca +,CR45137 - chr2R_5_12790001 chr2R_12790001 RAL-57 710 chr2R 12789289 12789328 chr2R 12797657 12797692 roo 11 8370 0.5 4.5 2.5 3.1 8403 chr2R 12789289 intron,3` UTR sca +,CR45137 - chr2R 12793490 intron,intron sca +,CR45137 - chr2R 12797692 intron,3` UTR sca +,CR45137 - chr2R_11_12790001 chr2R_12790001 RAL-57 711 chr2R 12798181 12798210 chr2R 12798325 12798354 10 144 3.5 8.5 6.0 1.4 173 chr2R 12798181 intron,3` UTR sca +,CR45137 - chr2R 12798268 intron,3` UTR sca +,CR45137 - chr2R 12798354 intron,3` UTR sca +,CR45137 - chr2R_10_12795001 chr2R_12795001 RAL-57 712 chr2R 12816069 12816103 chr2R 12816179 12816212 5 110 0.0 1.5 0.8 2.8 143 chr2R 12816069 intergenic not near genes chr2R 12816140 intergenic not near genes chr2R 12816212 intergenic not near genes chr2R_5_12815001 chr2R_12815001 RAL-57 713 chr2R 12908504 12908559 chr2R 12908834 12908866 44 321 13.0 5.0 9.0 4.4 362 chr2R 12908504 intergenic not near genes chr2R 12908685 intergenic not near genes chr2R 12908866 intergenic not near genes chr2R_44_12905001 chr2R_12905001 RAL-57 714 chr2R 13057590 13057649 chr2R 13057693 13057748 29 97 10.5 12.0 11.2 2.4 158 chr2R 13057590 3` UTR Drl-2 - chr2R 13057669 3` UTR Drl-2 - chr2R 13057748 3` UTR Drl-2 - chr2R_29_13055001 chr2R_13055001 RAL-57 715 chr2R 13136817 13136859 chr2R 13141640 13141682 Doc 33 4822 14.5 8.5 11.5 2.6 4865 chr2R 13136817 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141682 intron Cap-G + chr2R_33_13135001 chr2R_13135001 RAL-57 716 chr2R 13170690 13170747 chr2R 13170804 13170860 34 114 4.5 7.0 5.8 5.0 170 chr2R 13170690 3` UTR,3` UTR Spt-I +,CR45142 - chr2R 13170775 intergenic CR45142 -,Spt-I + chr2R 13170860 intergenic CR45142 -,Spt-I + chr2R_34_13170001 chr2R_13170001 RAL-57 717 chr2R 13218280 13218316 chr2R 13218388 13218436 14 109 10.0 0.0 5.0 2.3 156 chr2R 13218280 intron CG4630 - chr2R 13218358 intron CG4630 - chr2R 13218436 intron CG4630 - chr2R_14_13215001 chr2R_13215001 RAL-57 718 chr2R 13309650 13309676 chr2R 13309793 13309819 14 143 6.5 9.5 8.0 1.6 169 chr2R 13309650 intergenic not near genes chr2R 13309734 intergenic not near genes chr2R 13309819 intergenic not near genes chr2R_14_13305001 chr2R_13305001 RAL-57 719 chr2R 13364684 13364731 chr2R 13364795 13364842 18 111 3.5 7.0 5.2 2.9 158 chr2R 13364684 intergenic not near genes chr2R 13364763 intergenic not near genes chr2R 13364842 intergenic not near genes chr2R_18_13360001 chr2R_13360001 RAL-57 720 chr2R 13372105 13372151 chr2R 13372221 13372268 16 115 3.0 7.0 5.0 2.7 163 chr2R 13372105 intergenic not near genes chr2R 13372186 intergenic not near genes chr2R 13372268 intergenic not near genes chr2R_16_13370001 chr2R_13370001 RAL-57 721 chr2R 13376629 13376637 chr2R 13376764 13376772 8 135 8.5 10.5 9.5 0.8 143 chr2R 13376629 intron CG10814 - chr2R 13376700 intron CG10814 - chr2R 13376772 intron CG10814 - chr2R_8_13375001 chr2R_13375001 RAL-57 722 chr2R 13432911 13432969 chr2R 13433012 13433070 14 101 4.5 3.0 3.8 2.9 159 chr2R 13432911 intron CG42321 - chr2R 13432990 intron CG42321 - chr2R 13433070 intron,5` UTR CG42321 -,CG30065 + chr2R_14_13430001 chr2R_13430001 RAL-57 723 chr2R 13439112 13439228 chr2R 13439275 13439329 8 155 1.5 4.5 3.0 2.0 217 chr2R 13439112 intergenic CG42321 -,cnn - chr2R 13439220 intergenic cnn -,CG42321 - chr2R 13439329 3` UTR cnn - chr2R_8_13435001 chr2R_13435001 RAL-57 724 chr2R 13532494 13532529 chr2R 13532635 13532670 20 141 10.5 10.5 10.5 1.7 176 chr2R 13532494 intron Vmat - chr2R 13532582 intron Vmat - chr2R 13532670 intron Vmat - chr2R_20_13530001 chr2R_13530001 RAL-57 725 chr2R 13540178 13540194 chr2R 13540285 13540301 4 107 4.0 0.0 2.0 1.3 123 chr2R 13540178 intron CG6145 - chr2R 13540240 intron CG6145 - chr2R 13540301 intron CG6145 - chr2R_4_13540001 chr2R_13540001 RAL-57 726 chr2R 13573123 13573154 chr2R 13573228 13573258 12 105 3.5 2.5 3.0 3.0 135 chr2R 13573123 intergenic CG42807 -,CG42808 - chr2R 13573190 intergenic CG42808 -,CG42807 - chr2R 13573258 intergenic CG42808 -,CG42807 - chr2R_12_13570001 chr2R_13570001 RAL-57 727 chr2R 13580486 13580531 chr2R 13580851 13580876 jockey 23 372 0.0 10.5 5.2 3.7 390 chr2R 13580486 3` UTR CG6191 - chr2R 13580681 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580876 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_23_13580001 chr2R_13580001 RAL-57 728 chr2R 13609161 13609202 chr2R 13610616 13610657 12 1456 3.0 20.5 11.8 0.9 1496 chr2R 13609161 5` UTR CG12464 - chr2R 13609909 intergenic not near genes chr2R 13610657 intergenic not near genes chr2R_12_13605001 chr2R_13605001 RAL-57 729 chr2R 13709821 13709854 chr2R 13709939 13709972 10 118 5.5 8.5 7.0 1.2 151 chr2R 13709821 intron fas + chr2R 13709896 intron fas + chr2R 13709972 intron fas + chr2R_10_13705001 chr2R_13705001 RAL-57 730 chr2R 13728115 13728155 chr2R 13735797 13735837 opus 8 7682 2.5 1.0 1.8 2.9 7722 chr2R 13728115 intron fas + chr2R 13731976 intron fas + chr2R 13735837 intron fas + chr2R_8_13730001 chr2R_13730001 RAL-57 731 chr2R 13752783 13752830 chr2R 13752907 13752953 5 123 2.0 1.0 1.5 2.0 170 chr2R 13752783 intergenic not near genes chr2R 13752868 intergenic not near genes chr2R 13752953 intergenic not near genes chr2R_5_13750001 chr2R_13750001 RAL-57 732 chr2R 13768966 13768974 chr2R 13769090 13769096 7 123 8.0 5.0 6.5 0.9 130 chr2R 13768966 intergenic not near genes chr2R 13769031 intergenic not near genes chr2R 13769096 intergenic not near genes chr2R_7_13765001 chr2R_13765001 RAL-57 733 chr2R 13768983 13769010 chr2R 13769085 13769100 7 116 5.0 5.0 5.0 1.2 117 chr2R 13768983 intergenic not near genes chr2R 13769042 intergenic not near genes chr2R 13769100 intergenic not near genes chr2R_7_13765001 chr2R_13765001 RAL-57 734 chr2R 13785623 13785643 chr2R 13785774 13785794 4 151 5.5 6.5 6.0 0.6 171 chr2R 13785623 intron Cpr50Ca + chr2R 13785708 intron Cpr50Ca + chr2R 13785794 intron Cpr50Ca + chr2R_4_13785001 chr2R_13785001 RAL-57 735 chr2R 13785646 13785668 chr2R 13785771 13785817 4 143 4.0 6.5 5.2 0.6 171 chr2R 13785646 intron Cpr50Ca + chr2R 13785732 intron Cpr50Ca + chr2R 13785817 intron Cpr50Ca + chr2R_4_13785001 chr2R_13785001 RAL-57 736 chr2R 13793126 13793161 chr2R 13793227 13793228 9 95 4.5 4.5 4.5 1.6 102 chr2R 13793126 intergenic not near genes chr2R 13793177 intergenic not near genes chr2R 13793228 intergenic not near genes chr2R_9_13790001 chr2R_13790001 RAL-57 737 chr2R 13817680 13817702 chr2R 13817789 13817811 22 108 6.5 11.0 8.8 2.2 131 chr2R 13817680 intron stj + chr2R 13817746 intron stj + chr2R 13817811 intron stj + chr2R_22_13815001 chr2R_13815001 RAL-57 738 chr2R 13823006 13823065 chr2R 13823111 13823170 28 104 6.5 9.5 8.0 3.1 164 chr2R 13823006 intron fl(2)d - chr2R 13823088 intron fl(2)d - chr2R 13823170 intron fl(2)d - chr2R_28_13820001 chr2R_13820001 RAL-57 739 chr2R 13905582 13905601 chr2R 13907589 13907598 Rt1a 14 2004 25.0 12.5 18.8 0.7 2016 chr2R 13905582 intron shot - chr2R 13906590 intron shot - chr2R 13907598 intron shot - chr2R_14_13905001 chr2R_13905001 RAL-57 740 chr2R 13905602 13905633 chr2R 13907584 13907620 Rt1a 31 1997 11.5 11.5 11.5 2.5 2018 chr2R 13905602 intron shot - chr2R 13906611 intron shot - chr2R 13907620 intron shot - chr2R_31_13905001 chr2R_13905001 RAL-57 741 chr2R 13925828 13925869 chr2R 13926029 13926068 12 201 5.0 3.0 4.0 2.4 240 chr2R 13925828 intron shot - chr2R 13925948 intron shot - chr2R 13926068 intron shot - chr2R_12_13925001 chr2R_13925001 RAL-57 742 chr2R 14070445 14070496 chr2R 14070698 14070751 16 251 4.0 8.5 6.2 2.2 306 chr2R 14070445 exon Prosap - chr2R 14070598 intron Prosap - chr2R 14070751 intron Prosap - chr2R_16_14070001 chr2R_14070001 RAL-57 743 chr2R 14168345 14168392 chr2R 14168459 14168506 4 114 0.5 1.0 0.8 2.2 161 chr2R 14168345 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168426 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168506 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_4_14165001 chr2R_14165001 RAL-57 744 chr2R 14281394 14281412 chr2R 14281499 14281517 6 105 5.0 8.5 6.8 0.8 123 chr2R 14281394 intron Ih + chr2R 14281456 intron Ih + chr2R 14281517 intron Ih + chr2R_6_14280001 chr2R_14280001 RAL-57 745 chr2R 14285031 14285048 chr2R 14285139 14285156 11 108 3.5 5.5 4.5 2.0 125 chr2R 14285031 intron Ih + chr2R 14285094 intron Ih + chr2R 14285156 intron Ih + chr2R_11_14285001 chr2R_14285001 RAL-57 746 chr2R 14357532 14357577 chr2R 14357647 14357692 22 115 7.5 15.5 11.5 1.8 160 chr2R 14357532 intergenic CG8617 -,Arc1 - chr2R 14357612 intergenic Arc1 -,CG8617 - chr2R 14357692 intergenic Arc1 -,CG8617 - chr2R_22_14355001 chr2R_14355001 RAL-57 747 chr2R 14467284 14467325 chr2R 14476465 14476508 roo 8 9181 3.0 2.5 2.8 2.1 9224 chr2R 14467284 intergenic not near genes chr2R 14471896 intergenic not near genes chr2R 14476508 5` UTR CR44462 + chr2R_8_14470001 chr2R_14470001 RAL-57 748 chr2R 14497366 14497417 chr2R 14498554 14498604 1360 7 1188 0.0 3.5 1.8 2.5 1238 chr2R 14497366 3` UTR Cpsf160 - chr2R 14497985 intron Cpsf160 - chr2R 14498604 3` UTR Cpsf160 - chr2R_7_14495001 chr2R_14495001 RAL-57 749 chr2R 14566993 14567003 chr2R 14567082 14567088 4 97 5.0 0.0 2.5 1.1 95 chr2R 14566993 intron ttv + chr2R 14567040 intron ttv + chr2R 14567088 intron ttv + chr2R_4_14565001 chr2R_14565001 RAL-57 750 chr2R 14624566 14624589 chr2R 14624734 14624757 6 168 0.0 4.5 2.2 1.9 191 chr2R 14624566 intergenic Uhg5 +,snoRNA:Or-CD4 +,snoRNA:Me28S-G2703c + chr2R 14624662 intergenic Uhg5 +,snoRNA:Or-CD4 + chr2R 14624757 intergenic Uhg5 +,snoRNA:Or-CD4 + chr2R_6_14620001 chr2R_14620001 RAL-57 751 chr2R 14842363 14842392 chr2R 14842484 14842513 11 121 10.5 5.0 7.8 1.2 150 chr2R 14842363 intergenic NaPi-T - chr2R 14842438 intergenic NaPi-T - chr2R 14842513 intergenic NaPi-T - chr2R_11_14840001 chr2R_14840001 RAL-57 752 chr2R 14855007 14855162 chr2R 14855124 14855290 14 117 0.0 0.0 0.0 14.0 283 chr2R 14855007 5` UTR Ciao1 - chr2R 14855148 intergenic Ciao1 -,HPS1 + chr2R 14855290 intergenic HPS1 +,Ciao1 - chr2R_14_14855001 chr2R_14855001 RAL-57 753 chr2R 14889189 14889209 chr2R 14897822 14897841 Max-element 6 8633 5.0 1.0 3.0 1.5 8652 chr2R 14889189 intergenic Cyp6a8 - chr2R 14893515 intergenic not near genes chr2R 14897841 intergenic not near genes chr2R_6_14890001 chr2R_14890001 RAL-57 754 chr2R 14911676 14911728 chr2R 14911824 14911876 29 147 8.0 8.5 8.2 3.2 200 chr2R 14911676 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911876 intron CG10249 - chr2R_29_14910001 chr2R_14910001 RAL-57 755 chr2R 14913638 14913694 chr2R 14913773 14913828 10 132 0.5 2.5 1.5 4.0 190 chr2R 14913638 intron CG10249 - chr2R 14913733 intron CG10249 - chr2R 14913828 intron CG10249 - chr2R_10_14910001 chr2R_14910001 RAL-57 756 chr2R 14934429 14934489 chr2R 14934542 14934605 4 114 4.0 0.0 2.0 1.3 176 chr2R 14934429 intron CG10253 - chr2R 14934517 intron CG10253 - chr2R 14934605 intron CG10253 - chr2R_4_14930001 chr2R_14930001 RAL-57 757 chr2R 15008441 15008483 chr2R 15008572 15008614 9 131 1.5 6.0 3.8 1.9 173 chr2R 15008441 intergenic not near genes chr2R 15008528 intergenic not near genes chr2R 15008614 intergenic not near genes chr2R_9_15005001 chr2R_15005001 RAL-57 758 chr2R 15074779 15074828 chr2R 15075061 15075114 7 280 2.5 4.0 3.2 1.7 335 chr2R 15074779 intergenic not near genes chr2R 15074946 intergenic not near genes chr2R 15075114 intergenic not near genes chr2R_7_15070001 chr2R_15070001 RAL-57 759 chr2R 15084970 15084988 chr2R 15092029 15092062 297 8 7070 4.0 3.0 3.5 1.8 7092 chr2R 15084970 intergenic not near genes chr2R 15088516 intergenic not near genes chr2R 15092062 5` UTR CR44457 + chr2R_8_15085001 chr2R_15085001 RAL-57 760 chr2R 15119314 15119323 chr2R 15127820 15127829 Tirant 4 8506 4.5 4.0 4.2 0.8 8515 chr2R 15119314 intron chn + chr2R 15123572 intron chn + chr2R 15127829 intron chn + chr2R_4_15120001 chr2R_15120001 RAL-57 761 chr2R 15119329 15119350 chr2R 15127819 15127835 Tirant 6 8493 6.0 4.0 5.0 1.0 8506 chr2R 15119329 intron chn + chr2R 15123582 intron chn + chr2R 15127835 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-57 762 chr2R 15133462 15133519 chr2R 15133566 15133591 29 102 12.5 11.5 12.0 2.2 129 chr2R 15133462 intron chn + chr2R 15133526 intron chn + chr2R 15133591 intron chn + chr2R_29_15130001 chr2R_15130001 RAL-57 763 chr2R 15136622 15136628 chr2R 15136696 15136707 6 88 21.0 16.5 18.8 0.3 85 chr2R 15136622 intron chn + chr2R 15136664 intron chn + chr2R 15136707 intron chn + chr2R_6_15135001 chr2R_15135001 RAL-57 764 chr2R 15137944 15138002 chr2R 15138049 15138085 37 102 9.0 2.0 5.5 5.7 141 chr2R 15137944 intron chn + chr2R 15138014 intron chn + chr2R 15138085 intron chn + chr2R_37_15135001 chr2R_15135001 RAL-57 765 chr2R 15139011 15139057 chr2R 15145339 15145389 23 6334 80.0 22.5 51.2 0.4 6378 chr2R 15139011 intron chn + chr2R 15142200 exon chn + chr2R 15145389 exon Rpb12 - chr2R_23_15140001 chr2R_15140001 RAL-57 766 chr2R 15196075 15196121 chr2R 15196196 15196242 6 121 0.0 1.5 0.8 3.3 167 chr2R 15196075 intergenic not near genes chr2R 15196158 intergenic not near genes chr2R 15196242 intergenic not near genes chr2R_6_15195001 chr2R_15195001 RAL-57 767 chr2R 15207934 15207984 chr2R 15208255 15208309 23 323 6.0 9.0 7.5 2.7 375 chr2R 15207934 intron row - chr2R 15208122 intron,exon row -,Ir51b + chr2R 15208309 intron,exon row -,Ir51b + chr2R_23_15205001 chr2R_15205001 RAL-57 768 chr2R 15230364 15230373 chr2R 15230666 15230675 6 302 12.0 0.0 6.0 0.9 311 chr2R 15230364 intron,5` UTR Fs -,CR44370 + chr2R 15230520 intron,5` UTR Fs -,CR44370 + chr2R 15230675 intron,5` UTR Fs -,CR44370 + chr2R_6_15230001 chr2R_15230001 RAL-57 769 chr2R 15296137 15296162 chr2R 15296245 15296260 8 100 2.5 2.0 2.2 2.5 123 chr2R 15296137 intron Trpm - chr2R 15296198 intron Trpm - chr2R 15296260 intron Trpm - chr2R_8_15295001 chr2R_15295001 RAL-57 770 chr2R 15374794 15375069 chr2R 15374902 15375198 8 127 4.0 2.5 3.2 1.9 404 chr2R 15374794 intergenic not near genes chr2R 15374996 intergenic not near genes chr2R 15375198 intergenic not near genes chr2R_8_15370001 chr2R_15370001 RAL-57 771 chr2R 15472023 15472061 chr2R 15472132 15472169 6 109 0.0 7.0 3.5 1.3 146 chr2R 15472023 intergenic CG43729 +,CG8180 - chr2R 15472096 intergenic CG8180 -,CG43729 + chr2R 15472169 intergenic CG8180 -,CG43729 + chr2R_6_15470001 chr2R_15470001 RAL-57 772 chr2R 15554240 15554240 chr2R 15554482 15554495 4 246 43.0 69.5 56.2 0.1 255 chr2R 15554240 intergenic not near genes chr2R 15554368 intergenic not near genes chr2R 15554495 intergenic not near genes chr2R_4_15550001 chr2R_15550001 RAL-57 773 chr2R 15606106 15606128 chr2R 15606208 15606230 11 101 13.5 5.0 9.2 1.1 124 chr2R 15606106 intergenic not near genes chr2R 15606168 intergenic not near genes chr2R 15606230 intergenic not near genes chr2R_11_15605001 chr2R_15605001 RAL-57 774 chr2R 15644774 15644810 chr2R 15644878 15644914 13 104 5.5 5.0 5.2 2.1 140 chr2R 15644774 intron CG42524 + chr2R 15644844 intron CG42524 + chr2R 15644914 intron CG42524 + chr2R_13_15640001 chr2R_15640001 RAL-57 775 chr2R 15645765 15645818 chr2R 15645955 15646008 17 193 30.5 37.0 33.8 0.5 243 chr2R 15645765 intron CG42524 + chr2R 15645886 intron CG42524 + chr2R 15646008 intron CG42524 + chr2R_17_15645001 chr2R_15645001 RAL-57 776 chr2R 15679091 15679131 chr2R 15679200 15679240 14 109 2.0 3.0 2.5 4.0 149 chr2R 15679091 intergenic CG8207 -,Vha14-1 - chr2R 15679166 intergenic CG8207 -,Vha14-1 - chr2R 15679240 intergenic Vha14-1 -,CG8207 - chr2R_14_15675001 chr2R_15675001 RAL-57 777 chr2R 15685343 15685396 chr2R 15685471 15685507 23 126 11.5 10.5 11.0 1.9 164 chr2R 15685343 intron,exon Ranbp11 +,CG30082 - chr2R 15685425 intron,intron Ranbp11 +,CG30082 - chr2R 15685507 intron,intron Ranbp11 +,CG30082 - chr2R_23_15685001 chr2R_15685001 RAL-57 778 chr2R 15747014 15747071 chr2R 15747122 15747172 12 105 4.5 2.0 3.2 2.9 158 chr2R 15747014 intron CG30089 + chr2R 15747093 intron CG30089 + chr2R 15747172 intron CG30089 + chr2R_12_15745001 chr2R_15745001 RAL-57 779 chr2R 15828126 15828155 chr2R 15828311 15828340 14 185 0.0 4.5 2.2 4.4 214 chr2R 15828126 intron,intron tun +,Poxn - chr2R 15828233 intron,intron tun +,Poxn - chr2R 15828340 intron,intron tun +,Poxn - chr2R_14_15825001 chr2R_15825001 RAL-57 780 chr2R 15833501 15833515 chr2R 15833613 15833627 6 112 11.5 12.5 12.0 0.5 126 chr2R 15833501 intron,intron tun +,Poxn - chr2R 15833564 intron,intron tun +,Poxn - chr2R 15833627 intron,intron tun +,Poxn - chr2R_6_15830001 chr2R_15830001 RAL-57 781 chr2R 15833516 15833543 chr2R 15833611 15833624 14 97 7.0 10.5 8.8 1.4 108 chr2R 15833516 intron,intron tun +,Poxn - chr2R 15833570 intron,intron tun +,Poxn - chr2R 15833624 intron,intron tun +,Poxn - chr2R_14_15830001 chr2R_15830001 RAL-57 782 chr2R 15833545 15833552 chr2R 15833607 15833662 6 85 6.0 9.5 7.8 0.7 117 chr2R 15833545 intron,intron tun +,Poxn - chr2R 15833604 intron,intron tun +,Poxn - chr2R 15833662 intron,intron tun +,Poxn - chr2R_6_15830001 chr2R_15830001 RAL-57 783 chr2R 15887955 15888157 chr2R 15888056 15888267 20 109 9.0 12.0 10.5 1.7 312 chr2R 15887955 intron sli - chr2R 15888111 intron sli - chr2R 15888267 intron sli - chr2R_20_15885001 chr2R_15885001 RAL-57 784 chr2R 15891793 15891836 chr2R 15891893 15891936 9 101 4.5 8.0 6.2 1.2 143 chr2R 15891793 intron sli - chr2R 15891864 intron sli - chr2R 15891936 intron sli - chr2R_9_15890001 chr2R_15890001 RAL-57 785 chr2R 16056599 16056652 chr2R 16056730 16056765 57 122 18.5 16.5 17.5 3.1 166 chr2R 16056599 exon CG8405 + chr2R 16056682 intron CG8405 + chr2R 16056765 intron CG8405 + chr2R_57_16055001 chr2R_16055001 RAL-57 786 chr2R 16061706 16061714 chr2R 16064364 16064372 Burdock 4 2658 9.0 6.5 7.8 0.5 2666 chr2R 16061706 intergenic not near genes chr2R 16063039 intergenic not near genes chr2R 16064372 intergenic not near genes chr2R_4_16060001 chr2R_16060001 RAL-57 787 chr2R 16245405 16245430 chr2R 16245524 16245549 16 118 4.0 11.5 7.8 1.8 144 chr2R 16245405 intron CngA - chr2R 16245477 intron CngA - chr2R 16245549 intron CngA - chr2R_16_16245001 chr2R_16245001 RAL-57 788 chr2R 16279408 16279508 chr2R 16279516 16279672 7 156 0.0 0.0 0.0 7.0 264 chr2R 16279408 intergenic not near genes chr2R 16279540 intergenic CG15704 + chr2R 16279672 intergenic CG15704 + chr2R_7_16275001 chr2R_16275001 RAL-57 789 chr2R 16334646 16334677 chr2R 16334754 16334785 12 108 8.5 3.0 5.8 1.8 139 chr2R 16334646 intron Vha44 - chr2R 16334716 intron Vha44 - chr2R 16334785 intron Vha44 - chr2R_12_16330001 chr2R_16330001 RAL-57 790 chr2R 16357826 16357881 chr2R 16357929 16357982 24 92 9.5 5.5 7.5 2.8 156 chr2R 16357826 5` UTR CR43416 + chr2R 16357904 5` UTR CR43416 + chr2R 16357982 5` UTR CR43416 + chr2R_24_16355001 chr2R_16355001 RAL-57 791 chr2R 16374547 16374563 chr2R 16374662 16374678 5 115 0.0 2.0 1.0 2.5 131 chr2R 16374547 intergenic not near genes chr2R 16374612 intergenic not near genes chr2R 16374678 intergenic not near genes chr2R_5_16370001 chr2R_16370001 RAL-57 792 chr2R 16486850 16486874 chr2R 16486970 16486994 6 120 2.5 4.0 3.2 1.4 144 chr2R 16486850 exon CG33458 + chr2R 16486922 intron CG33458 + chr2R 16486994 intron CG33458 + chr2R_6_16485001 chr2R_16485001 RAL-57 793 chr2R 16571850 16571904 chr2R 16571970 16572024 29 120 4.0 7.0 5.5 4.5 174 chr2R 16571850 intergenic CG4927 + chr2R 16571937 intergenic CG4927 + chr2R 16572024 intergenic CG4927 + chr2R_29_16570001 chr2R_16570001 RAL-57 794 chr2R 16617056 16617081 chr2R 16617160 16617182 12 104 11.5 14.5 13.0 0.9 126 chr2R 16617056 intron CG5065 + chr2R 16617119 intron CG5065 + chr2R 16617182 intron CG5065 + chr2R_12_16615001 chr2R_16615001 RAL-57 795 chr2R 16618700 16618745 chr2R 16618799 16618845 24 101 1.0 10.0 5.5 3.7 145 chr2R 16618700 intron CG5065 + chr2R 16618772 intron CG5065 + chr2R 16618845 5` UTR CG5065 + chr2R_24_16615001 chr2R_16615001 RAL-57 796 chr2R 16638838 16638885 chr2R 16638946 16638993 16 107 7.5 10.5 9.0 1.6 155 chr2R 16638838 intron Alk - chr2R 16638916 intron Alk - chr2R 16638993 intron Alk - chr2R_16_16635001 chr2R_16635001 RAL-57 797 chr2R 16708978 16709023 chr2R 16709099 16709141 9 121 1.5 7.0 4.2 1.7 163 chr2R 16708978 intron CG30463 - chr2R 16709060 intron CG30463 - chr2R 16709141 intron CG30463 - chr2R_9_16705001 chr2R_16705001 RAL-57 798 chr2R 16779512 16779535 chr2R 16779701 16779724 11 189 0.0 11.0 5.5 1.7 212 chr2R 16779512 intergenic resilin + chr2R 16779618 intergenic resilin + chr2R 16779724 intergenic resilin + chr2R_11_16775001 chr2R_16775001 RAL-57 799 chr2R 16893750 16893805 chr2R 16893858 16893913 26 107 9.0 9.0 9.0 2.6 163 chr2R 16893750 intron CG8910 - chr2R 16893832 intron CG8910 - chr2R 16893913 intron CG8910 - chr2R_26_16890001 chr2R_16890001 RAL-57 800 chr2R 17132837 17132861 chr2R 17132962 17132986 8 125 2.0 1.5 1.8 2.9 149 chr2R 17132837 intergenic not near genes chr2R 17132912 intergenic not near genes chr2R 17132986 intergenic Acp54A1 + chr2R_8_17130001 chr2R_17130001 RAL-57 801 chr2R 17147226 17147260 chr2R 17152282 17152316 jockey 16 5056 5.0 9.5 7.2 2.0 5090 chr2R 17147226 intergenic not near genes chr2R 17149771 intergenic not near genes chr2R 17152316 intergenic not near genes chr2R_16_17145001 chr2R_17145001 RAL-57 802 chr2R 17161331 17161349 chr2R 17161561 17161578 15 230 19.0 0.0 9.5 1.4 247 chr2R 17161331 intergenic not near genes chr2R 17161454 intergenic not near genes chr2R 17161578 intergenic not near genes chr2R_15_17160001 chr2R_17160001 RAL-57 803 chr2R 17236484 17236537 chr2R 17241713 17241743 copia 14 5226 4.0 2.5 3.2 3.3 5259 chr2R 17236484 intron mbl + chr2R 17239114 intron mbl + chr2R 17241743 intron mbl + chr2R_14_17235001 chr2R_17235001 RAL-57 804 chr2R 17402974 17403002 chr2R 17403097 17403125 11 121 7.0 8.5 7.8 1.2 151 chr2R 17402974 intron Sip1 + chr2R 17403050 intron Sip1 + chr2R 17403125 intron Sip1 + chr2R_11_17400001 chr2R_17400001 RAL-57 805 chr2R 17458986 17459032 chr2R 17459095 17459142 10 110 4.0 3.5 3.8 2.1 156 chr2R 17458986 intron CG14478 + chr2R 17459064 intron CG14478 + chr2R 17459142 intron CG14478 + chr2R_10_17455001 chr2R_17455001 RAL-57 806 chr2R 17461274 17461312 chr2R 17461453 17461495 8 182 5.5 10.0 7.8 0.9 221 chr2R 17461274 intron CG14478 + chr2R 17461384 intron CG14478 + chr2R 17461495 intron CG14478 + chr2R_8_17460001 chr2R_17460001 RAL-57 807 chr2R 17510833 17510859 chr2R 17511050 17511076 8 216 1.0 4.0 2.5 2.3 243 chr2R 17510833 3` UTR CG34193 + chr2R 17510954 3` UTR CG34193 + chr2R 17511076 3` UTR CG34193 + chr2R_8_17510001 chr2R_17510001 RAL-57 808 chr2R 17532234 17532245 chr2R 17532336 17532346 4 102 29.5 17.0 23.2 0.2 112 chr2R 17532234 intron Patronin - chr2R 17532290 intron Patronin - chr2R 17532346 intron Patronin - chr2R_4_17530001 chr2R_17530001 RAL-57 809 chr2R 17708371 17708421 chr2R 17708477 17708527 20 106 3.0 4.5 3.8 4.2 156 chr2R 17708371 intron CG6424 - chr2R 17708449 intron CG6424 - chr2R 17708527 intron CG6424 - chr2R_20_17705001 chr2R_17705001 RAL-57 810 chr2R 17709964 17710115 chr2R 17710080 17710218 14 109 0.5 0.0 0.2 11.7 254 chr2R 17709964 intron CG6424 - chr2R 17710091 intron CG6424 - chr2R 17710218 intron CG6424 - chr2R_14_17710001 chr2R_17710001 RAL-57 811 chr2R 17748905 17748959 chr2R 17749013 17749066 28 106 3.5 7.0 5.2 4.5 161 chr2R 17748905 intergenic CG10931 + chr2R 17748986 5` UTR CG10931 + chr2R 17749066 exon CG10931 + chr2R_28_17745001 chr2R_17745001 RAL-57 812 chr2R 17782342 17782379 chr2R 17783570 17783607 pogo 10 1228 1.0 1.0 1.0 5.0 1265 chr2R 17782342 intergenic CG33981 -,fab1 - chr2R 17782974 intergenic not near genes chr2R 17783607 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-57 813 chr2R 17784002 17784045 chr2R 17784268 17784296 pogo 8 262 5.5 4.5 5.0 1.3 294 chr2R 17784002 intergenic mir-31a - chr2R 17784149 intergenic mir-31a - chr2R 17784296 intergenic mir-31a - chr2R_8_17780001 chr2R_17780001 RAL-57 814 chr2R 17812797 17812816 chr2R 17812900 17812917 6 103 11.5 6.5 9.0 0.6 120 chr2R 17812797 intron grh + chr2R 17812857 intron grh + chr2R 17812917 intron grh + chr2R_6_17810001 chr2R_17810001 RAL-57 815 chr2R 17920279 17920304 chr2R 17920506 17920530 6 227 3.5 1.0 2.2 1.9 251 chr2R 17920279 intron Elk + chr2R 17920404 intron Elk + chr2R 17920530 intron Elk + chr2R_6_17920001 chr2R_17920001 RAL-57 816 chr2R 17952859 17952883 chr2R 17952970 17953018 4 124 1.5 0.5 1.0 2.0 159 chr2R 17952859 intergenic not near genes chr2R 17952938 intergenic not near genes chr2R 17953018 intergenic not near genes chr2R_4_17950001 chr2R_17950001 RAL-57 817 chr2R 17966358 17966399 chr2R 17966582 17966623 7 217 2.0 3.0 2.5 2.0 265 chr2R 17966358 intergenic not near genes chr2R 17966490 intergenic not near genes chr2R 17966623 intergenic not near genes chr2R_7_17965001 chr2R_17965001 RAL-57 818 chr2R 17982899 17982933 chr2R 17983009 17983043 7 110 2.5 3.0 2.8 1.8 144 chr2R 17982899 intron dpr13 - chr2R 17982971 intron dpr13 - chr2R 17983043 intron dpr13 - chr2R_7_17980001 chr2R_17980001 RAL-57 819 chr2R 18042803 18042995 chr2R 18042945 18043113 5 127 0.0 0.0 0.0 5.0 310 chr2R 18042803 3` UTR CG5773 - chr2R 18042958 3` UTR CG5773 - chr2R 18043113 exon CG5773 - chr2R_5_18040001 chr2R_18040001 RAL-57 820 chr2R 18045647 18045696 chr2R 18046024 18046073 jockey 18 377 7.0 7.5 7.2 2.2 426 chr2R 18045647 intergenic not near genes chr2R 18045860 intergenic not near genes chr2R 18046073 intergenic CG5767 - chr2R_18_18045001 chr2R_18045001 RAL-57 821 chr2R 18124320 18124370 chr2R 18124422 18124472 38 102 10.5 17.0 13.8 2.6 152 chr2R 18124320 intron stau - chr2R 18124396 intron stau - chr2R 18124472 intron stau - chr2R_38_18120001 chr2R_18120001 RAL-57 822 chr2R 18144831 18144876 chr2R 18144968 18144998 7 129 87.0 66.0 76.5 0.1 167 chr2R 18144831 exon pAbp + chr2R 18144914 intron pAbp + chr2R 18144998 exon pAbp + chr2R_7_18140001 chr2R_18140001 RAL-57 823 chr2R 18189693 18189700 chr2R 18189811 18189818 5 117 6.0 0.5 3.2 1.2 125 chr2R 18189693 intron CG33958 - chr2R 18189756 intron CG33958 - chr2R 18189818 intron CG33958 - chr2R_5_18185001 chr2R_18185001 RAL-57 824 chr2R 18314392 18314421 chr2R 18314491 18314521 9 101 0.5 0.5 0.5 6.0 129 chr2R 18314392 intron sbb - chr2R 18314456 intron sbb - chr2R 18314521 intron sbb - chr2R_9_18310001 chr2R_18310001 RAL-57 825 chr2R 18358382 18358419 chr2R 18372619 18372651 roo 15 14236 2.0 5.5 3.8 3.1 14269 chr2R 18358382 intergenic not near genes chr2R 18365516 intergenic not near genes chr2R 18372651 intergenic not near genes chr2R_15_18365001 chr2R_18365001 RAL-57 826 chr2R 18392035 18392062 chr2R 18392176 18392203 7 140 0.0 3.0 1.5 2.8 168 chr2R 18392035 intergenic not near genes chr2R 18392119 intergenic not near genes chr2R 18392203 intergenic not near genes chr2R_7_18390001 chr2R_18390001 RAL-57 827 chr2R 18398135 18398186 chr2R 18398255 18398305 6 119 2.0 1.0 1.5 2.4 170 chr2R 18398135 intron GstE10 - chr2R 18398220 intron GstE10 - chr2R 18398305 intron GstE10 - chr2R_6_18395001 chr2R_18395001 RAL-57 828 chr2R 18408255 18408306 chr2R 18408401 18408424 15 142 5.0 6.0 5.5 2.3 169 chr2R 18408255 exon GstE8 + chr2R 18408340 exon GstE8 + chr2R 18408424 exon GstE8 + chr2R_15_18405001 chr2R_18405001 RAL-57 829 chr2R 18575771 18575827 chr2R 18581984 18582040 3S18 18 6196 4.5 4.5 4.5 3.3 6269 chr2R 18575771 intron GEFmeso - chr2R 18578906 intron GEFmeso - chr2R 18582040 intron GEFmeso - chr2R_18_18575001 chr2R_18575001 RAL-57 830 chr2R 18590843 18590897 chr2R 18600020 18600049 roo 18 9171 6.0 3.0 4.5 3.3 9206 chr2R 18590843 intron GEFmeso - chr2R 18595446 intron GEFmeso - chr2R 18600049 intron GEFmeso - chr2R_18_18595001 chr2R_18595001 RAL-57 831 chr2R 18692875 18692901 chr2R 18692987 18693013 9 111 7.0 0.5 3.8 1.9 138 chr2R 18692875 intron Sik3 + chr2R 18692944 intron Sik3 + chr2R 18693013 intron Sik3 + chr2R_9_18690001 chr2R_18690001 RAL-57 832 chr2R 18713217 18713249 chr2R 18713319 18713351 6 102 1.0 1.0 1.0 3.0 134 chr2R 18713217 intergenic not near genes chr2R 18713284 intergenic not near genes chr2R 18713351 intergenic not near genes chr2R_6_18710001 chr2R_18710001 RAL-57 833 chr2R 18738185 18738231 chr2R 18738286 18738332 5 101 0.0 1.5 0.8 2.8 147 chr2R 18738185 intron Hs3st-A + chr2R 18738258 intron Hs3st-A + chr2R 18738332 intron Hs3st-A + chr2R_5_18735001 chr2R_18735001 RAL-57 834 chr2R 18769627 18769735 chr2R 18769913 18769967 11 256 0.0 5.0 2.5 3.1 340 chr2R 18769627 intron Mctp + chr2R 18769797 intron Mctp + chr2R 18769967 intron Mctp + chr2R_11_18765001 chr2R_18765001 RAL-57 835 chr2R 18808135 18808188 chr2R 18808236 18808289 9 101 4.5 3.0 3.8 1.9 154 chr2R 18808135 intergenic CG15096 - chr2R 18808212 intergenic CG15096 - chr2R 18808289 intergenic CG15096 - chr2R_9_18805001 chr2R_18805001 RAL-57 836 chr2R 18862289 18862403 chr2R 18862401 18862513 8 119 0.0 0.0 0.0 8.0 224 chr2R 18862289 intergenic Jheh3 - chr2R 18862401 intergenic Jheh3 -,CG43069 + chr2R 18862513 intergenic CG43069 +,Jheh3 - chr2R_8_18860001 chr2R_18860001 RAL-57 837 chr2R 18953142 18953189 chr2R 18953254 18953301 17 111 4.5 5.0 4.8 2.9 159 chr2R 18953142 intron sano + chr2R 18953222 intron sano + chr2R 18953301 intron sano + chr2R_17_18950001 chr2R_18950001 RAL-57 838 chr2R 19015421 19015459 chr2R 19015522 19015540 10 99 5.5 7.5 6.5 1.3 119 chr2R 19015421 intergenic not near genes chr2R 19015480 intergenic not near genes chr2R 19015540 intergenic not near genes chr2R_10_19015001 chr2R_19015001 RAL-57 839 chr2R 19026022 19026050 chr2R 19026187 19026215 10 165 13.5 7.0 10.2 0.9 193 chr2R 19026022 intron 5-HT1B - chr2R 19026118 intron 5-HT1B - chr2R 19026215 intron 5-HT1B - chr2R_10_19025001 chr2R_19025001 RAL-57 840 chr2R 19048173 19048220 chr2R 19048874 19048921 9 700 2.0 4.5 3.2 2.1 748 chr2R 19048173 intergenic not near genes chr2R 19048547 intergenic not near genes chr2R 19048921 intergenic not near genes chr2R_9_19045001 chr2R_19045001 RAL-57 841 chr2R 19128464 19128520 chr2R 19128579 19128633 5 114 0.0 0.0 0.0 5.0 169 chr2R 19128464 intron CG15117 - chr2R 19128548 intron CG15117 - chr2R 19128633 intron CG15117 - chr2R_5_19125001 chr2R_19125001 RAL-57 842 chr2R 19234825 19234858 chr2R 19234932 19234958 8 106 1.0 3.5 2.2 2.5 133 chr2R 19234825 intron cora + chr2R 19234892 intron cora + chr2R 19234958 intron cora + chr2R_8_19230001 chr2R_19230001 RAL-57 843 chr2R 19331210 19331267 chr2R 19331315 19331342 24 94 11.5 15.5 13.5 1.7 132 chr2R 19331210 intron,intron Rgk1 -,CG34045 + chr2R 19331276 intron,intron Rgk1 -,CG34045 + chr2R 19331342 intron,intron Rgk1 -,CG34045 + chr2R_24_19330001 chr2R_19330001 RAL-57 844 chr2R 19498451 19498504 chr2R 19498553 19498603 20 101 1.5 10.5 6.0 2.9 152 chr2R 19498451 intron CG15120 + chr2R 19498527 intron CG15120 + chr2R 19498603 intron CG15120 + chr2R_20_19495001 chr2R_19495001 RAL-57 845 chr2R 19645001 19645051 chr2R 19645328 19645375 10 326 2.5 2.5 2.5 2.9 374 chr2R 19645001 intergenic not near genes chr2R 19645188 intergenic not near genes chr2R 19645375 intergenic not near genes chr2R_10_19645001 chr2R_19645001 RAL-57 846 chr2R 19691913 19691952 chr2R 19692031 19692055 15 116 2.5 10.5 6.5 2.0 142 chr2R 19691913 intergenic CR44506 + chr2R 19691984 intergenic CR44506 + chr2R 19692055 intergenic CR44506 + chr2R_15_19690001 chr2R_19690001 RAL-57 847 chr2R 19773987 19774038 chr2R 19774124 19774176 7 138 1.5 2.0 1.8 2.5 189 chr2R 19773987 intergenic not near genes chr2R 19774082 intergenic not near genes chr2R 19774176 intergenic not near genes chr2R_7_19770001 chr2R_19770001 RAL-57 848 chr2R 19776573 19776621 chr2R 19779921 19779969 jockey 14 3348 5.0 11.0 8.0 1.6 3396 chr2R 19776573 intergenic not near genes chr2R 19778271 intergenic not near genes chr2R 19779969 intergenic not near genes chr2R_14_19775001 chr2R_19775001 RAL-57 849 chr2R 19914836 19914867 chr2R 19922273 19922304 mdg1 6 7437 3.5 4.5 4.0 1.2 7468 chr2R 19914836 intergenic not near genes chr2R 19918570 intergenic not near genes chr2R 19922304 intergenic not near genes chr2R_6_19915001 chr2R_19915001 RAL-57 850 chr2R 19943250 19943270 chr2R 19943385 19943405 4 135 0.5 6.0 3.2 1.0 155 chr2R 19943250 intergenic not near genes chr2R 19943328 intergenic not near genes chr2R 19943405 intergenic not near genes chr2R_4_19940001 chr2R_19940001 RAL-57 851 chr2R 19957411 19957459 chr2R 19962636 19962686 copia 5 5225 3.0 1.0 2.0 1.7 5275 chr2R 19957411 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962686 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-57 852 chr2R 20008154 20008210 chr2R 20008268 20008291 12 108 3.5 2.5 3.0 3.0 137 chr2R 20008154 intergenic not near genes chr2R 20008222 intergenic not near genes chr2R 20008291 intergenic not near genes chr2R_12_20005001 chr2R_20005001 RAL-57 853 chr2R 20069217 20069245 chr2R 20071872 20071901 opus 5 2656 1.5 1.5 1.5 2.0 2684 chr2R 20069217 intergenic not near genes chr2R 20070559 intergenic not near genes chr2R 20071901 intergenic not near genes chr2R_5_20070001 chr2R_20070001 RAL-57 854 chr2R 20195926 20195940 chr2R 20196174 20196188 4 248 4.0 2.5 3.2 1.0 262 chr2R 20195926 intergenic not near genes chr2R 20196057 intergenic not near genes chr2R 20196188 intergenic not near genes chr2R_4_20195001 chr2R_20195001 RAL-57 855 chr2R 20223980 20223989 chr2R 24990844 24990854 4 4766865 19.0 14.5 16.8 0.2 4766874 chr2R 20223980 intergenic not near genes chr2R 22607417 intron,5` UTR RpS16 +,snoRNA:Psi28S-1175c + chr2R 24990854 intergenic zip -,CG3829 + chr2R_4_22605001 chr2R_22605001 RAL-57 856 chr2R 20227663 20227704 chr2R 20227773 20227825 9 120 3.0 3.0 3.0 2.2 162 chr2R 20227663 intergenic not near genes chr2R 20227744 intergenic not near genes chr2R 20227825 intergenic not near genes chr2R_9_20225001 chr2R_20225001 RAL-57 857 chr2R 20382311 20382356 chr2R 20382421 20382466 6 109 3.0 1.5 2.2 1.9 155 chr2R 20382311 intergenic not near genes chr2R 20382388 intergenic not near genes chr2R 20382466 intergenic not near genes chr2R_6_20380001 chr2R_20380001 RAL-57 858 chr2R 20476939 20476954 chr2R 20477040 20477054 6 99 11.5 9.5 10.5 0.5 115 chr2R 20476939 intron CG12484 + chr2R 20476996 intron CG12484 + chr2R 20477054 intron CG12484 + chr2R_6_20475001 chr2R_20475001 RAL-57 859 chr2R 20476956 20476970 chr2R 20477039 20477051 7 85 8.0 9.5 8.8 0.7 95 chr2R 20476956 intron CG12484 + chr2R 20477004 intron CG12484 + chr2R 20477051 intron CG12484 + chr2R_7_20475001 chr2R_20475001 RAL-57 860 chr2R 20502265 20502315 chr2R 20502404 20502454 7 139 0.0 3.5 1.8 2.5 189 chr2R 20502265 intergenic not near genes chr2R 20502360 intergenic not near genes chr2R 20502454 intergenic not near genes chr2R_7_20500001 chr2R_20500001 RAL-57 861 chr2R 20523020 20523038 chr2R 20523156 20523160 4 129 10.0 5.5 7.8 0.5 140 chr2R 20523020 intergenic not near genes chr2R 20523090 intergenic not near genes chr2R 20523160 intergenic not near genes chr2R_4_20520001 chr2R_20520001 RAL-57 862 chr2R 20523042 20523071 chr2R 20523150 20523203 6 126 4.5 5.0 4.8 1.0 161 chr2R 20523042 intergenic not near genes chr2R 20523122 intergenic not near genes chr2R 20523203 intergenic not near genes chr2R_6_20520001 chr2R_20520001 RAL-57 863 chr2R 20555318 20555333 chr2R 20555435 20555450 7 116 5.0 1.5 3.2 1.7 132 chr2R 20555318 intergenic not near genes chr2R 20555384 intergenic not near genes chr2R 20555450 intergenic not near genes chr2R_7_20555001 chr2R_20555001 RAL-57 864 chr2R 20601703 20601745 chr2R 20601811 20601849 20 108 6.5 9.0 7.8 2.3 146 chr2R 20601703 intron bl + chr2R 20601776 intron bl + chr2R 20601849 intron bl + chr2R_20_20600001 chr2R_20600001 RAL-57 865 chr2R 20607081 20607129 chr2R 20607331 20607379 26 247 8.0 6.5 7.2 3.2 298 chr2R 20607081 3` UTR Hil - chr2R 20607230 3` UTR Hil - chr2R 20607379 3` UTR Hil - chr2R_26_20605001 chr2R_20605001 RAL-57 866 chr2R 20667342 20667346 chr2R 20667478 20667482 5 136 11.5 12.5 12.0 0.4 140 chr2R 20667342 intergenic Fem-1 -,exu - chr2R 20667412 intergenic exu -,Fem-1 - chr2R 20667482 3` UTR exu - chr2R_5_20665001 chr2R_20665001 RAL-57 867 chr2R 20739440 20739468 chr2R 20744233 20744261 F-element 4 4793 1.5 2.5 2.0 1.3 4821 chr2R 20739440 intron dpr + chr2R 20741850 intron dpr + chr2R 20744261 intron dpr + chr2R_4_20740001 chr2R_20740001 RAL-57 868 chr2R 20783286 20783330 chr2R 20788083 20788127 F-element 6 4797 2.5 0.5 1.5 2.4 4841 chr2R 20783286 intergenic not near genes chr2R 20785706 intergenic not near genes chr2R 20788127 intergenic CG43666 - chr2R_6_20785001 chr2R_20785001 RAL-57 869 chr2R 20844589 20844608 chr2R 20844716 20844735 10 127 7.5 6.5 7.0 1.2 146 chr2R 20844589 intergenic not near genes chr2R 20844662 intergenic not near genes chr2R 20844735 intergenic not near genes chr2R_10_20840001 chr2R_20840001 RAL-57 870 chr2R 20964898 20964932 chr2R 20965009 20965040 9 109 4.5 5.0 4.8 1.6 142 chr2R 20964898 intergenic not near genes chr2R 20964969 intergenic not near genes chr2R 20965040 intergenic not near genes chr2R_9_20960001 chr2R_20960001 RAL-57 871 chr2R 21056665 21056675 chr2R 21056768 21056780 4 105 30.0 17.5 23.8 0.2 115 chr2R 21056665 5` UTR shg - chr2R 21056722 5` UTR shg - chr2R 21056780 5` UTR shg - chr2R_4_21055001 chr2R_21055001 RAL-57 872 chr2R 21056677 21056717 chr2R 21056764 21056823 50 96 14.0 15.5 14.8 3.2 146 chr2R 21056677 5` UTR shg - chr2R 21056750 5` UTR shg - chr2R 21056823 5` UTR shg - chr2R_50_21055001 chr2R_21055001 RAL-57 873 chr2R 21059707 21059761 chr2R 21059878 21059916 28 169 5.5 8.0 6.8 3.6 209 chr2R 21059707 3` UTR cpa + chr2R 21059812 3` UTR,3` UTR cpa +,CG15653 - chr2R 21059916 exon CG15653 - chr2R_28_21055001 chr2R_21055001 RAL-57 874 chr2R 21079306 21079346 chr2R 21079407 21079447 4 99 4.0 1.5 2.8 1.1 141 chr2R 21079306 intron Treh + chr2R 21079376 intron Treh + chr2R 21079447 intron Treh + chr2R_4_21075001 chr2R_21075001 RAL-57 875 chr2R 21083172 21083193 chr2R 21083261 21083301 9 105 4.0 8.5 6.2 1.2 129 chr2R 21083172 intron Treh + chr2R 21083236 intron Treh + chr2R 21083301 intron Treh + chr2R_9_21080001 chr2R_21080001 RAL-57 876 chr2R 21101647 21101668 chr2R 21101760 21101783 8 112 12.0 19.5 15.8 0.5 136 chr2R 21101647 intergenic CG34396 +,ktub + chr2R 21101715 intergenic ktub +,CG34396 + chr2R 21101783 intergenic ktub +,CG34396 + chr2R_8_21100001 chr2R_21100001 RAL-57 877 chr2R 21136871 21136939 chr2R 21136980 21137021 26 108 1.5 5.0 3.2 6.2 150 chr2R 21136871 intron Magi - chr2R 21136946 intron Magi - chr2R 21137021 intron Magi - chr2R_26_21135001 chr2R_21135001 RAL-57 878 chr2R 21151136 21151145 chr2R 21153793 21153803 opus 10 2658 0.0 19.5 9.8 0.9 2667 chr2R 21151136 intron CG30389 - chr2R 21152470 intron CG30389 - chr2R 21153803 intron CG30389 - chr2R_10_21150001 chr2R_21150001 RAL-57 879 chr2R 21534116 21534137 chr2R 21534198 21534243 16 103 6.5 9.5 8.0 1.8 127 chr2R 21534116 intron Egfr + chr2R 21534180 intron Egfr + chr2R 21534243 intron Egfr + chr2R_16_21530001 chr2R_21530001 RAL-57 880 chr2R 21546763 21546820 chr2R 21546866 21546917 14 95 8.5 6.5 7.5 1.6 154 chr2R 21546763 intron Egfr + chr2R 21546840 intron Egfr + chr2R 21546917 intron Egfr + chr2R_14_21545001 chr2R_21545001 RAL-57 881 chr2R 21592823 21592849 chr2R 21592931 21592952 7 102 16.5 25.5 21.0 0.3 129 chr2R 21592823 intergenic not near genes chr2R 21592888 intergenic not near genes chr2R 21592952 intergenic not near genes chr2R_7_21590001 chr2R_21590001 RAL-57 882 chr2R 21592852 21592855 chr2R 21592929 21592939 5 84 14.0 24.5 19.2 0.2 87 chr2R 21592852 intergenic not near genes chr2R 21592896 intergenic not near genes chr2R 21592939 intergenic not near genes chr2R_5_21590001 chr2R_21590001 RAL-57 883 chr2R 21700138 21700160 chr2R 21700244 21700255 4 105 8.5 7.0 7.8 0.5 117 chr2R 21700138 intron HmgZ - chr2R 21700196 intron HmgZ - chr2R 21700255 intron HmgZ - chr2R_4_21700001 chr2R_21700001 RAL-57 884 chr2R 21700163 21700186 chr2R 21700239 21700297 13 101 2.5 4.0 3.2 3.1 134 chr2R 21700163 intron HmgZ - chr2R 21700230 intron HmgZ - chr2R 21700297 intron HmgZ - chr2R_13_21700001 chr2R_21700001 RAL-57 885 chr2R 21721553 21721610 chr2R 21721666 21721723 18 108 10.5 2.0 6.2 2.5 170 chr2R 21721553 intron LBR + chr2R 21721638 intron LBR + chr2R 21721723 intron LBR + chr2R_18_21720001 chr2R_21720001 RAL-57 886 chr2R 21738280 21738293 chr2R 21747447 21747478 roo 4 9180 4.5 2.5 3.5 0.9 9198 chr2R 21738280 intergenic not near genes chr2R 21742879 intergenic not near genes chr2R 21747478 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-57 887 chr2R 21809512 21809552 chr2R 21817777 21817817 roo 6 8265 2.5 1.5 2.0 2.0 8305 chr2R 21809512 intergenic not near genes chr2R 21813664 intergenic not near genes chr2R 21817817 intergenic not near genes chr2R_6_21810001 chr2R_21810001 RAL-57 888 chr2R 21906263 21906303 chr2R 21906389 21906429 6 125 1.5 2.0 1.8 2.1 166 chr2R 21906263 intron Fili + chr2R 21906346 intron Fili + chr2R 21906429 intron Fili + chr2R_6_21905001 chr2R_21905001 RAL-57 889 chr2R 21919848 21919900 chr2R 21919961 21919993 5 94 2.5 1.0 1.8 1.8 145 chr2R 21919848 intron Fili + chr2R 21919920 intron Fili + chr2R 21919993 intron Fili + chr2R_5_21915001 chr2R_21915001 RAL-57 890 chr2R 21932277 21932280 chr2R 21932347 21932382 4 93 0.5 2.0 1.2 1.8 105 chr2R 21932277 intron Fili + chr2R 21932330 intron Fili + chr2R 21932382 intron Fili + chr2R_4_21930001 chr2R_21930001 RAL-57 891 chr2R 21946747 21946798 chr2R 21946868 21946919 12 121 4.0 4.0 4.0 2.4 172 chr2R 21946747 intergenic Fili + chr2R 21946833 intergenic not near genes chr2R 21946919 intergenic not near genes chr2R_12_21945001 chr2R_21945001 RAL-57 892 chr2R 21963176 21963219 chr2R 21963286 21963329 20 110 10.5 9.5 10.0 1.8 153 chr2R 21963176 intergenic not near genes chr2R 21963252 intergenic not near genes chr2R 21963329 intergenic not near genes chr2R_20_21960001 chr2R_21960001 RAL-57 893 chr2R 21966528 21966536 chr2R 21966641 21966649 6 112 5.0 0.0 2.5 1.7 121 chr2R 21966528 intron ppk9 + chr2R 21966588 intron ppk9 + chr2R 21966649 intron ppk9 + chr2R_6_21965001 chr2R_21965001 RAL-57 894 chr2R 21985524 21985548 chr2R 21985630 21985653 4 106 0.5 1.5 1.0 2.0 129 chr2R 21985524 intergenic CG30401 - chr2R 21985588 intergenic CG30401 - chr2R 21985653 3` UTR CG30401 - chr2R_4_21985001 chr2R_21985001 RAL-57 895 chr2R 22004271 22004318 chr2R 22004390 22004437 12 119 7.0 3.5 5.2 1.9 166 chr2R 22004271 intron CG34370 - chr2R 22004354 intron CG34370 - chr2R 22004437 intron CG34370 - chr2R_12_22000001 chr2R_22000001 RAL-57 896 chr2R 22035522 22035568 chr2R 22035634 22035672 15 110 4.5 4.0 4.2 2.9 150 chr2R 22035522 intron,exon CG34370 -,CG9308 + chr2R 22035597 intron,3` UTR CG34370 -,CG9308 + chr2R 22035672 intron CG34370 - chr2R_15_22035001 chr2R_22035001 RAL-57 897 chr2R 22040146 22040187 chr2R 22040236 22040276 10 96 1.0 5.5 3.2 2.4 130 chr2R 22040146 intergenic not near genes chr2R 22040211 intergenic not near genes chr2R 22040276 intergenic not near genes chr2R_10_22040001 chr2R_22040001 RAL-57 898 chr2R 22095937 22095988 chr2R 22096045 22096096 27 107 7.0 6.0 6.5 3.6 159 chr2R 22095937 intron CG11073 - chr2R 22096016 intron CG11073 - chr2R 22096096 intron CG11073 - chr2R_27_22095001 chr2R_22095001 RAL-57 899 chr2R 22248824 22248872 chr2R 22248919 22248973 14 93 5.0 5.0 5.0 2.3 149 chr2R 22248824 intron dve + chr2R 22248898 intron dve + chr2R 22248973 intron dve + chr2R_14_22245001 chr2R_22245001 RAL-57 900 chr2R 22290056 22290072 chr2R 22290165 22290181 4 109 9.5 6.5 8.0 0.4 125 chr2R 22290056 intergenic not near genes chr2R 22290118 intergenic not near genes chr2R 22290181 intergenic not near genes chr2R_4_22290001 chr2R_22290001 RAL-57 901 chr2R 4825123 4825123 chr2R 22311216 22311217 6 17486093 20.5 3.5 12.0 0.5 17486094 chr2R 4825123 intergenic not near genes chr2R 13568170 intergenic not near genes chr2R 22311217 intron wdp - chr2R_6_13565001 chr2R_13565001 RAL-57 902 chr2R 22346993 22347041 chr2R 22347406 22347453 33 411 10.0 10.5 10.2 2.9 460 chr2R 22346993 intron Liprin-gamma - chr2R 22347223 intron Liprin-gamma - chr2R 22347453 intron Liprin-gamma - chr2R_33_22345001 chr2R_22345001 RAL-57 903 chr2R 22349677 22349722 chr2R 22351477 22351531 jockey 18 1806 8.5 7.0 7.8 2.0 1854 chr2R 22349677 intron Liprin-gamma - chr2R 22350604 intron Liprin-gamma - chr2R 22351531 intron Liprin-gamma - chr2R_18_22350001 chr2R_22350001 RAL-57 904 chr2R 22377782 22377834 chr2R 22377893 22377941 11 110 9.5 4.0 6.8 1.4 159 chr2R 22377782 3` UTR Rtf1 + chr2R 22377862 3` UTR Rtf1 + chr2R 22377941 3` UTR Rtf1 + chr2R_11_22375001 chr2R_22375001 RAL-57 905 chr2R 22525726 22525777 chr2R 22529306 22529348 jockey 10 3579 6.5 5.5 6.0 1.4 3622 chr2R 22525726 intron px - chr2R 22527537 intron px - chr2R 22529348 intron px - chr2R_10_22525001 chr2R_22525001 RAL-57 906 chr2R 22545601 22545649 chr2R 22545705 22545753 23 104 5.0 7.5 6.2 3.2 152 chr2R 22545601 intron px - chr2R 22545677 intron px - chr2R 22545753 intron px - chr2R_23_22545001 chr2R_22545001 RAL-57 907 chr2R 22577066 22577122 chr2R 22577171 22577196 10 101 0.0 0.0 0.0 10.0 130 chr2R 22577066 intron dnr1 - chr2R 22577131 intron dnr1 - chr2R 22577196 intron dnr1 - chr2R_10_22575001 chr2R_22575001 RAL-57 908 chr2R 22588141 22588158 chr2R 22588244 22588256 4 110 13.0 23.0 18.0 0.2 115 chr2R 22588141 intron dnr1 - chr2R 22588198 intron dnr1 - chr2R 22588256 intron dnr1 - chr2R_4_22585001 chr2R_22585001 RAL-57 909 chr2R 22629378 22629392 chr2R 22629480 22629493 10 102 9.5 6.0 7.8 1.1 115 chr2R 22629378 intron CG33143 + chr2R 22629436 intron CG33143 + chr2R 22629493 intron CG33143 + chr2R_10_22625001 chr2R_22625001 RAL-57 910 chr2R 22659478 22659532 chr2R 22659581 22659629 54 100 15.5 18.0 16.8 3.0 151 chr2R 22659478 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R 22659554 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R 22659629 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R_54_22655001 chr2R_22655001 RAL-57 911 chr2R 22666571 22666620 chr2R 22666675 22666725 21 105 8.5 5.0 6.8 2.7 154 chr2R 22666571 3` UTR,intron CR45269 -,CR42868 + chr2R 22666648 5` UTR CR42868 + chr2R 22666725 5` UTR CR42868 + chr2R_21_22665001 chr2R_22665001 RAL-57 912 chr2R 22723206 22723263 chr2R 22723307 22723364 25 101 5.5 12.5 9.0 2.5 158 chr2R 22723206 intron jbug - chr2R 22723285 intron jbug - chr2R 22723364 intron jbug - chr2R_25_22720001 chr2R_22720001 RAL-57 913 chr2R 22756530 22756549 chr2R 22756632 22756649 7 101 16.5 10.0 13.2 0.5 119 chr2R 22756530 intron,intron CG42260 -,CR30267 + chr2R 22756590 intron,intron CG42260 -,CR30267 + chr2R 22756649 intron,intron CG42260 -,CR30267 + chr2R_7_22755001 chr2R_22755001 RAL-57 914 chr2R 22756551 22756581 chr2R 22756629 22756683 14 100 9.5 11.0 10.2 1.2 132 chr2R 22756551 intron,intron CG42260 -,CR30267 + chr2R 22756617 intron,intron CG42260 -,CR30267 + chr2R 22756683 intron,intron CG42260 -,CR30267 + chr2R_14_22755001 chr2R_22755001 RAL-57 915 chr2R 22774943 22774994 chr2R 22775387 22775437 jockey 23 443 9.5 12.0 10.8 1.9 494 chr2R 22774943 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775437 intron CG42260 - chr2R_23_22775001 chr2R_22775001 RAL-57 916 chr2R 22777935 22777990 chr2R 22778083 22778126 8 138 5.0 0.0 2.5 2.3 191 chr2R 22777935 intron CG42260 - chr2R 22778030 intron CG42260 - chr2R 22778126 intron CG42260 - chr2R_8_22775001 chr2R_22775001 RAL-57 917 chr2R 22781932 22781985 chr2R 22782144 22782197 16 202 2.0 4.5 3.2 3.8 265 chr2R 22781932 intron CG42260 - chr2R 22782064 intron CG42260 - chr2R 22782197 intron CG42260 - chr2R_16_22780001 chr2R_22780001 RAL-57 918 chr2R 22789806 22789831 chr2R 22790100 22790139 5 307 3.0 1.5 2.2 1.6 333 chr2R 22789806 intron CG42260 - chr2R 22789972 intron CG42260 - chr2R 22790139 intron CG42260 - chr2R_5_22785001 chr2R_22785001 RAL-57 919 chr2R 22843007 22843042 chr2R 22844994 22845029 flea 15 1987 9.5 6.0 7.8 1.7 2022 chr2R 22843007 intergenic CG9826 + chr2R 22844018 intergenic not near genes chr2R 22845029 intergenic not near genes chr2R_15_22840001 chr2R_22840001 RAL-57 920 chr2R 22868232 22868267 chr2R 22868368 22868405 15 133 25.5 16.5 21.0 0.7 173 chr2R 22868232 5` UTR fd59A + chr2R 22868318 5` UTR fd59A + chr2R 22868405 5` UTR fd59A + chr2R_15_22865001 chr2R_22865001 RAL-57 921 chr2R 22868268 22868286 chr2R 22868366 22868423 20 128 14.0 16.0 15.0 1.2 155 chr2R 22868268 5` UTR fd59A + chr2R 22868346 5` UTR fd59A + chr2R 22868423 5` UTR fd59A + chr2R_20_22865001 chr2R_22865001 RAL-57 922 chr2R 22911557 22911561 chr2R 22911818 22911842 4 266 12.0 35.0 23.5 0.2 285 chr2R 22911557 exon nahoda + chr2R 22911700 exon nahoda + chr2R 22911842 exon nahoda + chr2R_4_22910001 chr2R_22910001 RAL-57 923 chr2R 22941803 22941850 chr2R 22941902 22941954 21 104 1.0 7.5 4.2 4.0 151 chr2R 22941803 intergenic CG42694 + chr2R 22941878 5` UTR CG42694 + chr2R 22941954 5` UTR CG42694 + chr2R_21_22940001 chr2R_22940001 RAL-57 924 chr2R 22951810 22951859 chr2R 22951921 22951970 12 111 2.0 4.5 3.2 2.9 160 chr2R 22951810 3` UTR CR32835 - chr2R 22951890 3` UTR CR32835 - chr2R 22951970 intron CR32835 - chr2R_12_22950001 chr2R_22950001 RAL-57 925 chr2R 22988287 22988323 chr2R 22988393 22988429 9 106 5.5 13.5 9.5 0.9 142 chr2R 22988287 intron twi + chr2R 22988358 intron twi + chr2R 22988429 intron twi + chr2R_9_22985001 chr2R_22985001 RAL-57 926 chr2R 23029587 23029613 chr2R 23029689 23029713 10 102 10.0 8.5 9.2 1.0 126 chr2R 23029587 intron,intron twi +,CG42741 - chr2R 23029650 intron,intron twi +,CG42741 - chr2R 23029713 intron,intron twi +,CG42741 - chr2R_10_23025001 chr2R_23025001 RAL-57 927 chr2R 23041187 23041201 chr2R 23041290 23041304 4 103 4.0 8.0 6.0 0.6 117 chr2R 23041187 intron,intron twi +,CG42741 - chr2R 23041246 intron,intron twi +,CG42741 - chr2R 23041304 intron,intron twi +,CG42741 - chr2R_4_23040001 chr2R_23040001 RAL-57 928 chr2R 23045799 23045855 chr2R 23045910 23045965 13 110 0.0 9.0 4.5 2.4 166 chr2R 23045799 intron twi + chr2R 23045882 intron twi + chr2R 23045965 intron twi + chr2R_13_23045001 chr2R_23045001 RAL-57 929 chr2R 23048556 23048590 chr2R 23048672 23048706 12 113 15.0 11.0 13.0 0.9 150 chr2R 23048556 intergenic twi + chr2R 23048631 intergenic twi + chr2R 23048706 intergenic twi + chr2R_12_23045001 chr2R_23045001 RAL-57 930 chr2R 23061747 23061791 chr2R 23061866 23061909 43 117 10.0 17.0 13.5 3.0 162 chr2R 23061747 3` UTR l(2)06496 - chr2R 23061828 3` UTR l(2)06496 - chr2R 23061909 3` UTR l(2)06496 - chr2R_43_23060001 chr2R_23060001 RAL-57 931 chr2R 23158428 23158429 chr2R 23158553 23158595 4 150 16.0 22.5 19.2 0.2 167 chr2R 23158428 intron CG9899 + chr2R 23158512 intron CG9899 + chr2R 23158595 intron CG9899 + chr2R_4_23155001 chr2R_23155001 RAL-57 932 chr2R 23175046 23175067 chr2R 23175121 23175155 16 89 7.0 8.0 7.5 1.9 109 chr2R 23175046 intron CG34371 - chr2R 23175100 intron CG34371 - chr2R 23175155 intron CG34371 - chr2R_16_23175001 chr2R_23175001 RAL-57 933 chr2R 23181874 23181924 chr2R 23182314 23182365 10 440 2.0 7.0 4.5 1.8 491 chr2R 23181874 intron CG34371 - chr2R 23182120 intron CG34371 - chr2R 23182365 intron CG34371 - chr2R_10_23180001 chr2R_23180001 RAL-57 934 chr2R 23190001 23190010 chr2R 23190106 23190115 4 105 6.0 0.0 3.0 1.0 114 chr2R 23190001 intron CG34371 - chr2R 23190058 intron CG34371 - chr2R 23190115 intron CG34371 - chr2R_4_23190001 chr2R_23190001 RAL-57 935 chr2R 23236792 23236851 chr2R 23236915 23236970 6 120 3.5 0.5 2.0 2.0 178 chr2R 23236792 intergenic not near genes chr2R 23236881 intergenic not near genes chr2R 23236970 intergenic not near genes chr2R_6_23235001 chr2R_23235001 RAL-57 936 chr2R 23243548 23243554 chr2R 23243650 23243655 5 102 21.5 4.0 12.8 0.4 107 chr2R 23243548 intergenic yip3 - chr2R 23243602 intergenic yip3 - chr2R 23243655 intergenic yip3 - chr2R_5_23240001 chr2R_23240001 RAL-57 937 chr2R 23243558 23243602 chr2R 23243649 23243702 16 91 11.0 5.0 8.0 1.8 144 chr2R 23243558 intergenic yip3 - chr2R 23243630 intergenic yip3 - chr2R 23243702 intergenic yip3 - chr2R_16_23240001 chr2R_23240001 RAL-57 938 chr2R 23259780 23259834 chr2R 23260017 23260071 22 234 4.5 3.0 3.8 4.6 291 chr2R 23259780 intergenic not near genes chr2R 23259926 intergenic not near genes chr2R 23260071 intergenic not near genes chr2R_22_23255001 chr2R_23255001 RAL-57 939 chr2R 23291047 23291050 chr2R 23291173 23291176 4 126 0.5 10.0 5.2 0.6 129 chr2R 23291047 3` UTR CR44783 - chr2R 23291112 3` UTR CR44783 - chr2R 23291176 3` UTR CR44783 - chr2R_4_23290001 chr2R_23290001 RAL-57 940 chr2R 23291051 23291065 chr2R 23291164 23291191 9 120 0.5 8.0 4.2 1.7 140 chr2R 23291051 3` UTR CR44783 - chr2R 23291121 3` UTR CR44783 - chr2R 23291191 3` UTR CR44783 - chr2R_9_23290001 chr2R_23290001 RAL-57 941 chr2R 23291067 23291093 chr2R 23291161 23291218 17 121 0.5 8.0 4.2 3.3 151 chr2R 23291067 3` UTR CR44783 - chr2R 23291142 3` UTR CR44783 - chr2R 23291218 3` UTR CR44783 - chr2R_17_23290001 chr2R_23290001 RAL-57 942 chr2R 23423718 23423765 chr2R 23423901 23423930 21 179 9.0 7.5 8.2 2.3 212 chr2R 23423718 intron CG9815 - chr2R 23423824 intron CG9815 - chr2R 23423930 intron CG9815 - chr2R_21_23420001 chr2R_23420001 RAL-57 943 chr2R 23429184 23429241 chr2R 23429433 23429456 13 242 3.0 2.5 2.8 3.4 272 chr2R 23429184 intron CG9815 - chr2R 23429320 intron CG9815 - chr2R 23429456 intron CG9815 - chr2R_13_23425001 chr2R_23425001 RAL-57 944 chr2R 23437230 23437243 chr2R 23437306 23437331 14 87 9.0 8.0 8.5 1.5 101 chr2R 23437230 intergenic not near genes chr2R 23437280 intergenic not near genes chr2R 23437331 intergenic not near genes chr2R_14_23435001 chr2R_23435001 RAL-57 945 chr2R 23508918 23508942 chr2R 23509060 23509083 5 142 1.5 5.0 3.2 1.2 165 chr2R 23508918 intergenic not near genes chr2R 23509000 intergenic not near genes chr2R 23509083 intergenic not near genes chr2R_5_23505001 chr2R_23505001 RAL-57 946 chr2R 23529564 23529568 chr2R 23537151 23537159 412 5 7595 32.0 19.0 25.5 0.2 7595 chr2R 23529564 intron bw - chr2R 23533362 intron bw - chr2R 23537159 exon bw - chr2R_5_23530001 chr2R_23530001 RAL-57 947 chr2R 23529571 23529607 chr2R 23537148 23537179 412 29 7582 16.0 13.5 14.8 1.8 7608 chr2R 23529571 intron bw - chr2R 23533375 intron bw - chr2R 23537179 exon bw - chr2R_29_23530001 chr2R_23530001 RAL-57 948 chr2R 23579984 23580024 chr2R 23580092 23580115 13 105 3.5 8.0 5.8 1.9 131 chr2R 23579984 intron apt + chr2R 23580050 intron apt + chr2R 23580115 intron apt + chr2R_13_23580001 chr2R_23580001 RAL-57 949 chr2R 23594815 23594863 chr2R 23595057 23595097 13 241 5.5 5.5 5.5 2.0 282 chr2R 23594815 intron apt + chr2R 23594956 intron apt + chr2R 23595097 intron apt + chr2R_13_23590001 chr2R_23590001 RAL-57 950 chr2R 23739160 23739217 chr2R 23739261 23739320 45 103 11.5 9.5 10.5 3.9 160 chr2R 23739160 intron egl - chr2R 23739240 intron egl - chr2R 23739320 intron egl - chr2R_45_23735001 chr2R_23735001 RAL-57 951 chr2R 23747651 23747666 chr2R 23747728 23747732 4 72 27.0 16.5 21.8 0.2 81 chr2R 23747651 exon CG13560 + chr2R 23747692 exon CG13560 + chr2R 23747732 exon CG13560 + chr2R_4_23745001 chr2R_23745001 RAL-57 952 chr2R 23771254 23771303 chr2R 23771359 23771406 6 103 2.0 0.0 1.0 3.0 152 chr2R 23771254 intron CG9850 - chr2R 23771330 intron CG9850 - chr2R 23771406 intron CG9850 - chr2R_6_23770001 chr2R_23770001 RAL-57 953 chr2R 23784450 23784506 chr2R 23784552 23784608 28 101 7.0 6.0 6.5 3.7 158 chr2R 23784450 intron CG9850 - chr2R 23784529 intron CG9850 - chr2R 23784608 intron CG9850 - chr2R_28_23780001 chr2R_23780001 RAL-57 954 chr2R 23802287 23802312 chr2R 23802389 23802418 5 112 4.0 6.0 5.0 0.8 131 chr2R 23802287 3` UTR CG30177 + chr2R 23802352 3` UTR CG30177 + chr2R 23802418 3` UTR CG30177 + chr2R_5_23800001 chr2R_23800001 RAL-57 955 chr2R 23843524 23843571 chr2R 23843624 23843673 41 101 6.5 11.0 8.8 4.2 149 chr2R 23843524 3` UTR Snap29 - chr2R 23843598 3` UTR Snap29 - chr2R 23843673 3` UTR Snap29 - chr2R_41_23840001 chr2R_23840001 RAL-57 956 chr2R 23914285 23914332 chr2R 23921934 23921981 412 16 7643 7.0 7.0 7.0 2.0 7696 chr2R 23914285 exon kcc + chr2R 23918133 intron kcc + chr2R 23921981 exon kcc + chr2R_16_23915001 chr2R_23915001 RAL-57 957 chr2R 24013029 24013077 chr2R 24013134 24013181 25 105 10.0 11.5 10.8 2.1 152 chr2R 24013029 exon Unc-89 - chr2R 24013105 intron Unc-89 - chr2R 24013181 intron Unc-89 - chr2R_25_24010001 chr2R_24010001 RAL-57 958 chr2R 24031356 24031413 chr2R 24031465 24031522 54 108 11.0 15.0 13.0 3.9 166 chr2R 24031356 5` UTR CG30172 - chr2R 24031439 intergenic CG30172 -,Chi - chr2R 24031522 intergenic Chi -,CG30172 - chr2R_54_24030001 chr2R_24030001 RAL-57 959 chr2R 24147048 24147068 chr2R 24154651 24154669 412 8 7599 16.5 9.0 12.8 0.6 7621 chr2R 24147048 intron Dat + chr2R 24150858 intron Dat + chr2R 24154669 intron Dat + chr2R_8_24150001 chr2R_24150001 RAL-57 960 chr2R 24147070 24147088 chr2R 24154644 24154661 412 4 7584 8.0 7.0 7.5 0.5 7591 chr2R 24147070 intron Dat + chr2R 24150866 intron Dat + chr2R 24154661 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-57 961 chr2R 24177212 24177267 chr2R 24184722 24184777 412 13 7510 6.0 0.5 3.2 3.1 7565 chr2R 24177212 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184777 3` UTR Nop60B + chr2R_13_24180001 chr2R_24180001 RAL-57 962 chr2R 24210373 24210428 chr2R 24210569 24210605 13 187 4.5 3.0 3.8 2.7 232 chr2R 24210373 intergenic not near genes chr2R 24210489 intergenic not near genes chr2R 24210605 intergenic not near genes chr2R_13_24210001 chr2R_24210001 RAL-57 963 chr2R 24274804 24274863 chr2R 24274906 24274971 5 107 2.5 0.0 1.2 2.3 167 chr2R 24274804 intergenic not near genes chr2R 24274888 intergenic not near genes chr2R 24274971 intergenic not near genes chr2R_5_24270001 chr2R_24270001 RAL-57 964 chr2R 24321509 24321534 chr2R 24321617 24321643 10 100 9.5 6.0 7.8 1.1 134 chr2R 24321509 intergenic not near genes chr2R 24321576 intergenic not near genes chr2R 24321643 intergenic not near genes chr2R_10_24320001 chr2R_24320001 RAL-57 965 chr2R 24321535 24321550 chr2R 24321614 24321650 13 91 6.0 6.0 6.0 1.9 115 chr2R 24321535 intergenic not near genes chr2R 24321592 intergenic not near genes chr2R 24321650 intergenic not near genes chr2R_13_24320001 chr2R_24320001 RAL-57 966 chr2R 24329466 24329504 chr2R 24329572 24329612 24 108 10.5 4.0 7.2 2.9 146 chr2R 24329466 intron CR44810 + chr2R 24329539 intron CR44810 + chr2R 24329612 intron CR44810 + chr2R_24_24325001 chr2R_24325001 RAL-57 967 chr2R 24352352 24352375 chr2R 24352450 24352476 10 98 22.0 27.5 24.8 0.4 124 chr2R 24352352 intron,3` UTR bs +,CR44811 - chr2R 24352414 intron,3` UTR bs +,CR44811 - chr2R 24352476 intron,intron bs +,CR44811 - chr2R_10_24350001 chr2R_24350001 RAL-57 968 chr2R 24352378 24352386 chr2R 24352449 24352460 4 79 19.5 26.0 22.8 0.2 82 chr2R 24352378 intron,3` UTR bs +,CR44811 - chr2R 24352419 intron,3` UTR bs +,CR44811 - chr2R 24352460 intron,3` UTR bs +,CR44811 - chr2R_4_24350001 chr2R_24350001 RAL-57 969 chr2R 24353407 24353441 chr2R 24361794 24361828 roo 28 8387 12.5 12.0 12.2 2.1 8421 chr2R 24353407 intron,intron bs +,CR44811 - chr2R 24357618 intron,intron bs +,CR44811 - chr2R 24361828 intron,intron bs +,CR44811 - chr2R_28_24355001 chr2R_24355001 RAL-57 970 chr2R 24383802 24383856 chr2R 24383908 24383941 40 104 11.0 9.5 10.2 3.6 139 chr2R 24383802 intron mAChR-A - chr2R 24383872 intron mAChR-A - chr2R 24383941 exon mAChR-A - chr2R_40_24380001 chr2R_24380001 RAL-57 971 chr2R 24430920 24430945 chr2R 24431033 24431058 9 110 0.0 16.0 8.0 1.0 138 chr2R 24430920 intergenic CG15873 -,Pgam5-2 - chr2R 24430989 intergenic CG15873 -,Pgam5-2 - chr2R 24431058 intergenic Pgam5-2 -,CG15873 - chr2R_9_24430001 chr2R_24430001 RAL-57 972 chr2R 24548900 24548925 chr2R 24549009 24549019 12 107 12.0 3.5 7.8 1.4 119 chr2R 24548900 intron,intron CG4622 -,ITP + chr2R 24548960 intron,intron CG4622 -,ITP + chr2R 24549019 intron,intron CG4622 -,ITP + chr2R_12_24545001 chr2R_24545001 RAL-57 973 chr2R 24548926 24548954 chr2R 24549005 24549035 16 101 5.0 3.0 4.0 3.2 109 chr2R 24548926 intron,intron CG4622 -,ITP + chr2R 24548980 intron,intron CG4622 -,ITP + chr2R 24549035 intron,intron CG4622 -,ITP + chr2R_16_24545001 chr2R_24545001 RAL-57 974 chr2R 24553633 24553666 chr2R 24553725 24553762 27 99 9.0 11.5 10.2 2.4 129 chr2R 24553633 intron,intron CG4622 -,ITP + chr2R 24553698 intron,intron CG4622 -,ITP + chr2R 24553762 intron,intron CG4622 -,ITP + chr2R_27_24550001 chr2R_24550001 RAL-57 975 chr2R 24590094 24590095 chr2R 24590209 24590225 4 121 14.0 7.0 10.5 0.3 131 chr2R 24590094 intron pio + chr2R 24590160 intron pio + chr2R 24590225 intron pio + chr2R_4_24590001 chr2R_24590001 RAL-57 976 chr2R 24590098 24590106 chr2R 24590203 24590239 4 113 8.5 6.0 7.2 0.5 141 chr2R 24590098 intron pio + chr2R 24590168 intron pio + chr2R 24590239 intron pio + chr2R_4_24590001 chr2R_24590001 RAL-57 977 chr2R 24592924 24592977 chr2R 24593041 24593090 21 113 13.0 3.5 8.2 2.3 166 chr2R 24592924 intron pio + chr2R 24593007 intron pio + chr2R 24593090 intron pio + chr2R_21_24590001 chr2R_24590001 RAL-57 978 chr2R 24633996 24634023 chr2R 24634073 24634129 12 83 4.5 4.0 4.2 2.3 133 chr2R 24633996 intron CG13594 - chr2R 24634062 intron CG13594 - chr2R 24634129 intron CG13594 - chr2R_12_24630001 chr2R_24630001 RAL-57 979 chr2R 24636883 24636909 chr2R 24636994 24637015 6 110 15.0 0.0 7.5 0.7 132 chr2R 24636883 intron CG13594 - chr2R 24636949 intron CG13594 - chr2R 24637015 intron CG13594 - chr2R_6_24635001 chr2R_24635001 RAL-57 980 chr2R 24647565 24647609 chr2R 24655146 24655191 412 6 7582 7.0 2.0 4.5 1.1 7626 chr2R 24647565 intergenic not near genes chr2R 24651378 intergenic not near genes chr2R 24655191 intergenic not near genes chr2R_6_24650001 chr2R_24650001 RAL-57 981 chr2R 24727867 24727917 chr2R 24735390 24735450 mdg1 36 7522 13.0 14.5 13.8 2.4 7583 chr2R 24727867 intron Mid1 - chr2R 24731658 intron Mid1 - chr2R 24735450 intron Mid1 - chr2R_36_24730001 chr2R_24730001 RAL-57 982 chr2R 24763586 24763599 chr2R 24765587 24765600 G2 4 1999 34.0 17.5 25.8 0.1 2014 chr2R 24763586 exon CG3894 + chr2R 24764593 intron CG3894 + chr2R 24765600 exon CG3894 + chr2R_4_24760001 chr2R_24760001 RAL-57 983 chr2R 24763600 24763644 chr2R 24765586 24765645 G2 71 1989 17.0 17.5 17.2 3.9 2045 chr2R 24763600 exon CG3894 + chr2R 24764622 intron CG3894 + chr2R 24765645 exon CG3894 + chr2R_71_24760001 chr2R_24760001 RAL-57 984 chr2R 24767975 24767987 chr2R 24768081 24768096 10 108 21.5 10.0 15.8 0.6 121 chr2R 24767975 5` UTR GstE12 - chr2R 24768036 5` UTR GstE12 - chr2R 24768096 5` UTR GstE12 - chr2R_10_24765001 chr2R_24765001 RAL-57 985 chr2R 24767988 24768023 chr2R 24768077 24768123 22 104 11.0 8.5 9.8 2.0 135 chr2R 24767988 5` UTR GstE12 - chr2R 24768056 5` UTR GstE12 - chr2R 24768123 5` UTR GstE12 - chr2R_22_24765001 chr2R_24765001 RAL-57 986 chr2R 24848635 24848687 chr2R 24848744 24848792 49 109 0.0 24.5 12.2 3.7 157 chr2R 24848635 intergenic CG3650 + chr2R 24848714 intergenic CG3650 + chr2R 24848792 intergenic CG3650 + chr2R_49_24845001 chr2R_24845001 RAL-57 987 chr2R 25061317 25061367 chr2R 25061424 25061450 16 100 3.5 2.5 3.0 4.0 133 chr2R 25061317 intergenic not near genes chr2R 25061384 intergenic not near genes chr2R 25061450 intergenic not near genes chr2R_16_25060001 chr2R_25060001 RAL-57 988 chr2R 25081720 25081763 chr2R 25081892 25081936 7 173 1.5 1.0 1.2 3.2 216 chr2R 25081720 intron gol - chr2R 25081828 intron gol - chr2R 25081936 intron gol - chr2R_7_25080001 chr2R_25080001 RAL-57 989 chr2R 25101249 25101308 chr2R 25101376 25101435 47 126 5.5 10.5 8.0 5.2 186 chr2R 25101249 intron lov - chr2R 25101342 intron lov - chr2R 25101435 intron lov - chr2R_47_25100001 chr2R_25100001 RAL-57 990 chr2R 25102499 25102550 chr2R 25102693 25102744 26 191 8.0 5.0 6.5 3.5 245 chr2R 25102499 intron lov - chr2R 25102622 intron lov - chr2R 25102744 intron lov - chr2R_26_25100001 chr2R_25100001 RAL-57 991 chr2R 25104774 25104806 chr2R 25104924 25104956 11 150 3.0 6.5 4.8 1.9 182 chr2R 25104774 intron lov - chr2R 25104865 intron lov - chr2R 25104956 intron lov - chr2R_11_25100001 chr2R_25100001 RAL-57 992 chr2R 25130988 25131021 chr2R 25131087 25131123 4 101 4.5 2.0 3.2 1.0 135 chr2R 25130988 intron lov - chr2R 25131056 intron lov - chr2R 25131123 intron lov - chr2R_4_25130001 chr2R_25130001 RAL-57 993 chr3L 105719 105769 chr3L 105839 105889 8 119 3.0 1.5 2.2 2.5 170 chr3L 105719 intergenic not near genes chr3L 105804 intergenic not near genes chr3L 105889 intergenic not near genes chr3L_8_105001 chr3L_105001 RAL-57 994 chr3L 349367 349408 chr3L 349480 349520 10 110 6.0 5.5 5.8 1.5 153 chr3L 349367 intron Ptpmeg + chr3L 349444 intron Ptpmeg + chr3L 349520 intron Ptpmeg + chr3L_10_345001 chr3L_345001 RAL-57 995 chr3L 365499 365553 chr3L 365610 365664 27 111 4.0 6.5 5.2 4.4 165 chr3L 365499 3` UTR CG1233 + chr3L 365582 3` UTR CG1233 + chr3L 365664 3` UTR,3` UTR CG1233 +,CG13884 - chr3L_27_365001 chr3L_365001 RAL-57 996 chr3L 369836 369894 chr3L 369942 370000 40 104 4.0 10.0 7.0 5.0 164 chr3L 369836 intron trh - chr3L 369918 intron trh - chr3L 370000 intron trh - chr3L_40_365001 chr3L_365001 RAL-57 997 chr3L 390931 390986 chr3L 391062 391116 50 127 12.0 12.0 12.0 3.8 185 chr3L 390931 intron trh - chr3L 391024 intron trh - chr3L 391116 intron trh - chr3L_50_390001 chr3L_390001 RAL-57 998 chr3L 393166 393200 chr3L 393285 393325 7 122 13.0 10.0 11.5 0.6 159 chr3L 393166 3` UTR CR45378 - chr3L 393246 3` UTR CR45378 - chr3L 393325 intergenic CR45378 -,CR43969 + chr3L_7_390001 chr3L_390001 RAL-57 999 chr3L 402673 402717 chr3L 409744 409795 297 26 7074 2.5 8.0 5.2 4.2 7122 chr3L 402673 intergenic not near genes chr3L 406234 intergenic not near genes chr3L 409795 intergenic not near genes chr3L_26_405001 chr3L_405001 RAL-57 1000 chr3L 470917 470941 chr3L 471161 471192 5 249 2.0 1.5 1.8 1.8 275 chr3L 470917 intron klar - chr3L 471054 intron klar - chr3L 471192 intron klar - chr3L_5_470001 chr3L_470001 RAL-57 1001 chr3L 563948 564000 chr3L 564152 564204 6 202 1.0 2.5 1.8 2.1 256 chr3L 563948 intron hipk + chr3L 564076 intron hipk + chr3L 564204 intron hipk + chr3L_6_560001 chr3L_560001 RAL-57 1002 chr3L 592945 592968 chr3L 593046 593069 5 101 2.5 7.5 5.0 0.8 124 chr3L 592945 intergenic MED14 + chr3L 593007 intergenic MED14 + chr3L 593069 intergenic MED14 + chr3L_5_590001 chr3L_590001 RAL-57 1003 chr3L 659417 659440 chr3L 659503 659539 4 95 0.0 4.5 2.2 1.2 122 chr3L 659417 intergenic not near genes chr3L 659478 intergenic not near genes chr3L 659539 intergenic not near genes chr3L_4_655001 chr3L_655001 RAL-57 1004 chr3L 662921 662947 chr3L 662992 663047 10 87 22.0 11.5 16.8 0.6 126 chr3L 662921 intergenic not near genes chr3L 662984 intergenic not near genes chr3L 663047 intergenic not near genes chr3L_10_660001 chr3L_660001 RAL-57 1005 chr3L 665651 665671 chr3L 666126 666141 9 470 19.0 11.0 15.0 0.6 490 chr3L 665651 intergenic not near genes chr3L 665896 intergenic not near genes chr3L 666141 intergenic not near genes chr3L_9_665001 chr3L_665001 RAL-57 1006 chr3L 665672 665705 chr3L 666123 666158 14 457 7.0 10.5 8.8 1.4 486 chr3L 665672 intergenic not near genes chr3L 665915 intergenic not near genes chr3L 666158 intergenic not near genes chr3L_14_665001 chr3L_665001 RAL-57 1007 chr3L 695623 695676 chr3L 695771 695813 19 144 6.0 7.5 6.8 2.4 190 chr3L 695623 intron CG13894 - chr3L 695718 intron CG13894 - chr3L 695813 intron CG13894 - chr3L_19_695001 chr3L_695001 RAL-57 1008 chr3L 705220 705257 chr3L 705321 705356 11 101 3.0 0.5 1.8 3.9 136 chr3L 705220 intergenic CR44514 + chr3L 705288 intergenic CR44514 + chr3L 705356 5` UTR CR44514 + chr3L_11_705001 chr3L_705001 RAL-57 1009 chr3L 719533 719585 chr3L 719673 719714 12 138 2.5 4.5 3.5 2.7 181 chr3L 719533 intergenic not near genes chr3L 719624 intergenic not near genes chr3L 719714 intergenic not near genes chr3L_12_715001 chr3L_715001 RAL-57 1010 chr3L 789925 789945 chr3L 790469 790489 roo 5 544 1.0 2.0 1.5 2.0 564 chr3L 789925 intergenic not near genes chr3L 790207 intergenic not near genes chr3L 790489 intergenic not near genes chr3L_5_790001 chr3L_790001 RAL-57 1011 chr3L 802565 802565 chr3L 11777678 11777678 4 10975113 24.5 40.5 32.5 0.1 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_6290001 chr3L_6290001 RAL-57 1012 chr3L 822070 822095 chr3L 822175 822199 5 104 0.5 8.5 4.5 0.9 129 chr3L 822070 intergenic not near genes chr3L 822134 intergenic not near genes chr3L 822199 intergenic not near genes chr3L_5_820001 chr3L_820001 RAL-57 1013 chr3L 852545 852565 chr3L 852672 852692 19 126 11.0 10.5 10.8 1.6 147 chr3L 852545 3` UTR CG13890 + chr3L 852618 3` UTR CG13890 + chr3L 852692 intergenic CG13890 +,dpr20 - chr3L_19_850001 chr3L_850001 RAL-57 1014 chr3L 857982 858001 chr3L 866485 866507 Tirant 8 8500 17.0 8.5 12.8 0.6 8525 chr3L 857982 intergenic not near genes chr3L 862244 intergenic not near genes chr3L 866507 5` UTR CG12502 + chr3L_8_860001 chr3L_860001 RAL-57 1015 chr3L 858006 858029 chr3L 866480 866514 Tirant 6 8472 9.5 8.0 8.8 0.6 8508 chr3L 858006 intergenic not near genes chr3L 862260 intergenic not near genes chr3L 866514 5` UTR CG12502 + chr3L_6_860001 chr3L_860001 RAL-57 1016 chr3L 875636 875691 chr3L 875745 875803 52 109 14.5 12.0 13.2 3.7 167 chr3L 875636 intron CG32479 + chr3L 875720 intron CG32479 + chr3L 875803 intron CG32479 + chr3L_52_875001 chr3L_875001 RAL-57 1017 chr3L 925152 925199 chr3L 932603 932650 mdg1 12 7451 4.5 1.0 2.8 3.2 7498 chr3L 925152 intron Glut1 + chr3L 928901 intron Glut1 + chr3L 932650 intron Glut1 + chr3L_12_925001 chr3L_925001 RAL-57 1018 chr3L 933904 933943 chr3L 934032 934071 9 128 0.5 2.0 1.2 4.1 167 chr3L 933904 intron Glut1 + chr3L 933988 intron Glut1 + chr3L 934071 intron Glut1 + chr3L_9_930001 chr3L_930001 RAL-57 1019 chr3L 939752 939791 chr3L 940898 940937 jockey 19 1146 7.5 7.5 7.5 2.2 1185 chr3L 939752 intron Glut1 + chr3L 940344 intron Glut1 + chr3L 940937 intron Glut1 + chr3L_19_940001 chr3L_940001 RAL-57 1020 chr3L 943840 943883 chr3L 943946 943957 13 100 4.0 8.5 6.2 1.8 117 chr3L 943840 intron Glut1 + chr3L 943898 intron Glut1 + chr3L 943957 intron Glut1 + chr3L_13_940001 chr3L_940001 RAL-57 1021 chr3L 960999 961041 chr3L 961117 961159 4 118 1.0 3.5 2.2 1.2 160 chr3L 960999 intron Glut1 + chr3L 961079 intron Glut1 + chr3L 961159 intron Glut1 + chr3L_4_960001 chr3L_960001 RAL-57 1022 chr3L 1001843 1001876 chr3L 1001946 1001979 8 102 8.5 11.0 9.8 0.7 136 chr3L 1001843 intron trio - chr3L 1001911 intron trio - chr3L 1001979 intron trio - chr3L_8_1000001 chr3L_1000001 RAL-57 1023 chr3L 1003029 1003081 chr3L 1003131 1003183 39 101 15.0 17.5 16.2 2.3 154 chr3L 1003029 intron trio - chr3L 1003106 intron trio - chr3L 1003183 intron trio - chr3L_39_1000001 chr3L_1000001 RAL-57 1024 chr3L 1031561 1031615 chr3L 1031651 1031673 22 89 11.0 12.0 11.5 1.8 112 chr3L 1031561 intron trio - chr3L 1031617 intron trio - chr3L 1031673 intron trio - chr3L_22_1030001 chr3L_1030001 RAL-57 1025 chr3L 1033337 1033347 chr3L 1033458 1033468 5 121 0.0 0.0 0.0 5.0 131 chr3L 1033337 intron trio - chr3L 1033402 intron trio - chr3L 1033468 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-57 1026 chr3L 1042942 1042989 chr3L 1043045 1043092 16 103 3.0 3.5 3.2 3.8 150 chr3L 1042942 intron bab1 - chr3L 1043017 intron bab1 - chr3L 1043092 intron bab1 - chr3L_16_1040001 chr3L_1040001 RAL-57 1027 chr3L 1069953 1069985 chr3L 1070283 1070315 5 329 1.5 1.5 1.5 2.0 362 chr3L 1069953 intron bab1 - chr3L 1070134 intron bab1 - chr3L 1070315 intron bab1 - chr3L_5_1070001 chr3L_1070001 RAL-57 1028 chr3L 1103969 1104015 chr3L 1104062 1104118 8 102 10.5 0.5 5.5 1.2 149 chr3L 1103969 intergenic not near genes chr3L 1104044 intergenic not near genes chr3L 1104118 intergenic not near genes chr3L_8_1100001 chr3L_1100001 RAL-57 1029 chr3L 1109607 1109661 chr3L 1109720 1109762 28 111 13.5 4.0 8.8 2.9 155 chr3L 1109607 intergenic not near genes chr3L 1109684 intergenic not near genes chr3L 1109762 intergenic not near genes chr3L_28_1105001 chr3L_1105001 RAL-57 1030 chr3L 1145222 1145233 chr3L 1145323 1145337 4 103 8.0 0.0 4.0 0.8 115 chr3L 1145222 intron bab2 - chr3L 1145280 intron bab2 - chr3L 1145337 intron bab2 - chr3L_4_1145001 chr3L_1145001 RAL-57 1031 chr3L 1154118 1154159 chr3L 1163293 1163333 roo 9 9175 8.0 6.0 7.0 1.1 9215 chr3L 1154118 intron bab2 - chr3L 1158726 intron bab2 - chr3L 1163333 intron bab2 - chr3L_9_1155001 chr3L_1155001 RAL-57 1032 chr3L 1166997 1167015 chr3L 1167099 1167117 14 102 6.5 10.5 8.5 1.5 120 chr3L 1166997 intron bab2 - chr3L 1167057 intron bab2 - chr3L 1167117 intron bab2 - chr3L_14_1165001 chr3L_1165001 RAL-57 1033 chr3L 1195373 1195400 chr3L 1195602 1195629 9 229 0.5 0.0 0.2 7.5 256 chr3L 1195373 intergenic LysX - chr3L 1195501 intergenic LysX - chr3L 1195629 intergenic LysX - chr3L_9_1195001 chr3L_1195001 RAL-57 1034 chr3L 1201986 1201995 chr3L 1203441 1203451 4 1454 47.5 49.5 48.5 0.1 1465 chr3L 1201986 intron,exon mwh +,CG32335 - chr3L 1202718 intron,exon mwh +,CG32335 - chr3L 1203451 intron,exon mwh +,CG9119 - chr3L_4_1200001 chr3L_1200001 RAL-57 1035 chr3L 1219580 1219625 chr3L 1227328 1227360 412 44 7751 8.0 10.0 9.0 4.4 7780 chr3L 1219580 intron mwh + chr3L 1223470 intron mwh + chr3L 1227360 intron mwh + chr3L_44_1220001 chr3L_1220001 RAL-57 1036 chr3L 1374409 1374425 chr3L 1374511 1374517 18 101 22.0 8.5 15.2 1.1 108 chr3L 1374409 intron,intron Ptp61F -,ru + chr3L 1374463 intron,intron Ptp61F -,ru + chr3L 1374517 intron,intron Ptp61F -,ru + chr3L_18_1370001 chr3L_1370001 RAL-57 1037 chr3L 1385150 1385194 chr3L 1385261 1385306 33 111 6.5 5.5 6.0 4.7 156 chr3L 1385150 intron,intron Ptp61F -,ru + chr3L 1385228 intron,intron Ptp61F -,ru + chr3L 1385306 intron,intron Ptp61F -,ru + chr3L_33_1385001 chr3L_1385001 RAL-57 1038 chr3L 1415783 1415807 chr3L 1415863 1415899 7 83 3.5 4.5 4.0 1.4 116 chr3L 1415783 intron Ptp61F - chr3L 1415841 intron Ptp61F - chr3L 1415899 intron Ptp61F - chr3L_7_1415001 chr3L_1415001 RAL-57 1039 chr3L 1485729 1485735 chr3L 1486910 1486931 1360 8 1190 19.0 29.5 24.2 0.3 1202 chr3L 1485729 intron stet - chr3L 1486330 intron stet - chr3L 1486931 intron stet - chr3L_8_1485001 chr3L_1485001 RAL-57 1040 chr3L 1485736 1485741 chr3L 1486908 1486937 1360 5 1182 14.5 28.0 21.2 0.2 1201 chr3L 1485736 intron stet - chr3L 1486336 intron stet - chr3L 1486937 intron stet - chr3L_5_1485001 chr3L_1485001 RAL-57 1041 chr3L 1505970 1506028 chr3L 1513592 1513650 17.6 29 7621 7.0 6.5 6.8 3.7 7680 chr3L 1505970 intron,intron Psa +,cue - chr3L 1509810 intron,intron Psa +,cue - chr3L 1513650 intron,intron Psa +,cue - chr3L_29_1505001 chr3L_1505001 RAL-57 1042 chr3L 1569497 1569531 chr3L 1569597 1569622 33 99 9.0 17.0 13.0 2.4 125 chr3L 1569497 5` UTR CG12004 + chr3L 1569560 intron CG12004 + chr3L 1569622 intron CG12004 + chr3L_33_1565001 chr3L_1565001 RAL-57 1043 chr3L 1740838 1740847 chr3L 1741108 1741112 pogo 5 269 9.5 5.5 7.5 0.6 274 chr3L 1740838 intron Gk + chr3L 1740975 intron Gk + chr3L 1741112 intron Gk + chr3L_5_1740001 chr3L_1740001 RAL-57 1044 chr3L 1740850 1740887 chr3L 1741103 1741153 pogo 9 265 6.0 4.5 5.2 1.5 303 chr3L 1740850 intron Gk + chr3L 1741002 intron Gk + chr3L 1741153 intron Gk + chr3L_9_1740001 chr3L_1740001 RAL-57 1045 chr3L 1853020 1853047 chr3L 1853129 1853156 13 109 3.5 8.5 6.0 1.9 136 chr3L 1853020 intron CG13936 - chr3L 1853088 intron CG13936 - chr3L 1853156 intron CG13936 - chr3L_13_1850001 chr3L_1850001 RAL-57 1046 chr3L 1909521 1909559 chr3L 1909642 1909680 6 118 1.0 2.5 1.8 2.1 159 chr3L 1909521 intron CG1887 - chr3L 1909600 intron CG1887 - chr3L 1909680 intron CG1887 - chr3L_6_1905001 chr3L_1905001 RAL-57 1047 chr3L 1922437 1922458 chr3L 1922540 1922540 8 98 24.0 22.0 23.0 0.3 103 chr3L 1922437 intron Dbx + chr3L 1922488 intron Dbx + chr3L 1922540 intron Dbx + chr3L_8_1920001 chr3L_1920001 RAL-57 1048 chr3L 1922460 1922469 chr3L 1922528 1922530 13 88 23.0 24.5 23.8 0.5 70 chr3L 1922460 intron Dbx + chr3L 1922495 intron Dbx + chr3L 1922530 intron Dbx + chr3L_13_1920001 chr3L_1920001 RAL-57 1049 chr3L 1993085 1993100 chr3L 1993173 1993208 6 105 3.0 3.5 3.2 1.4 123 chr3L 1993085 intergenic not near genes chr3L 1993146 intergenic not near genes chr3L 1993208 intergenic not near genes chr3L_6_1990001 chr3L_1990001 RAL-57 1050 chr3L 2108225 2108280 chr3L 2113453 2113503 copia 20 5229 4.0 7.5 5.8 2.9 5278 chr3L 2108225 intron sls - chr3L 2110864 intron sls - chr3L 2113503 intron sls - chr3L_20_2110001 chr3L_2110001 RAL-57 1051 chr3L 2139901 2139953 chr3L 2140033 2140085 22 130 7.5 5.5 6.5 2.9 184 chr3L 2139901 exon zormin - chr3L 2139993 intron zormin - chr3L 2140085 intron zormin - chr3L_22_2135001 chr3L_2135001 RAL-57 1052 chr3L 2168756 2168801 chr3L 2168872 2168916 7 112 2.0 2.5 2.2 2.2 160 chr3L 2168756 exon CG15879 - chr3L 2168836 intron CG15879 - chr3L 2168916 intron CG15879 - chr3L_7_2165001 chr3L_2165001 RAL-57 1053 chr3L 2278768 2278786 chr3L 2279012 2279038 9 260 3.5 8.0 5.8 1.3 270 chr3L 2278768 intergenic not near genes chr3L 2278903 intergenic not near genes chr3L 2279038 intergenic not near genes chr3L_9_2275001 chr3L_2275001 RAL-57 1054 chr3L 2307983 2308024 chr3L 2308114 2308154 4 131 3.5 1.0 2.2 1.2 171 chr3L 2307983 intergenic not near genes chr3L 2308068 intergenic not near genes chr3L 2308154 intergenic not near genes chr3L_4_2305001 chr3L_2305001 RAL-57 1055 chr3L 2355425 2355465 chr3L 2355638 2355675 5 212 0.5 0.0 0.2 4.2 250 chr3L 2355425 intergenic not near genes chr3L 2355550 intergenic not near genes chr3L 2355675 intergenic not near genes chr3L_5_2355001 chr3L_2355001 RAL-57 1056 chr3L 2411313 2411344 chr3L 2411418 2411449 7 98 3.0 0.5 1.8 2.5 136 chr3L 2411313 intron CG45186 + chr3L 2411381 intron CG45186 + chr3L 2411449 intron CG45186 + chr3L_7_2410001 chr3L_2410001 RAL-57 1057 chr3L 2447485 2447538 chr3L 2456660 2456701 roo 23 9173 8.0 10.5 9.2 2.3 9216 chr3L 2447485 intron CG45186 + chr3L 2452093 intron CG45186 + chr3L 2456701 intron CG45186 + chr3L_23_2450001 chr3L_2450001 RAL-57 1058 chr3L 2467429 2467479 chr3L 2467549 2467601 4 122 3.5 0.0 1.8 1.4 172 chr3L 2467429 intron CG45186 + chr3L 2467515 intron CG45186 + chr3L 2467601 intron CG45186 + chr3L_4_2465001 chr3L_2465001 RAL-57 1059 chr3L 2493799 2493850 chr3L 2493901 2493963 8 108 3.5 0.0 1.8 2.9 164 chr3L 2493799 intron CG45186 + chr3L 2493881 intron CG45186 + chr3L 2493963 intron CG45186 + chr3L_8_2490001 chr3L_2490001 RAL-57 1060 chr3L 2506350 2506404 chr3L 2506582 2506636 12 229 3.5 4.0 3.8 2.5 286 chr3L 2506350 3` UTR Spn - chr3L 2506493 3` UTR Spn - chr3L 2506636 3` UTR Spn - chr3L_12_2505001 chr3L_2505001 RAL-57 1061 chr3L 2533634 2533643 chr3L 2533741 2533748 4 106 21.0 21.0 21.0 0.2 114 chr3L 2533634 intron Spn - chr3L 2533691 intron Spn - chr3L 2533748 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-57 1062 chr3L 2533650 2533679 chr3L 2533733 2533768 7 94 8.5 15.5 12.0 0.5 118 chr3L 2533650 intron Spn - chr3L 2533709 intron Spn - chr3L 2533768 intron Spn - chr3L_7_2530001 chr3L_2530001 RAL-57 1063 chr3L 2561502 2561559 chr3L 2561604 2561661 38 102 11.5 12.0 11.8 3.0 159 chr3L 2561502 intron msn - chr3L 2561582 intron msn - chr3L 2561661 intron msn - chr3L_38_2560001 chr3L_2560001 RAL-57 1064 chr3L 2590334 2590368 chr3L 2590467 2590502 18 131 12.5 0.0 6.2 2.5 168 chr3L 2590334 intron dos + chr3L 2590418 intron dos + chr3L 2590502 intron dos + chr3L_18_2590001 chr3L_2590001 RAL-57 1065 chr3L 2609653 2609675 chr3L 2609754 2609776 8 100 11.5 5.0 8.2 0.9 123 chr3L 2609653 intron Pxn - chr3L 2609714 intron Pxn - chr3L 2609776 intron Pxn - chr3L_8_2605001 chr3L_2605001 RAL-57 1066 chr3L 2683921 2683977 chr3L 2684022 2684078 36 101 8.5 6.5 7.5 4.2 157 chr3L 2683921 intron Fife - chr3L 2684000 intron Fife - chr3L 2684078 intron Fife - chr3L_36_2680001 chr3L_2680001 RAL-57 1067 chr3L 2795700 2795749 chr3L 2795848 2795897 19 147 5.0 5.0 5.0 3.2 197 chr3L 2795700 intron CG43444 - chr3L 2795798 intron CG43444 - chr3L 2795897 intron CG43444 - chr3L_19_2795001 chr3L_2795001 RAL-57 1068 chr3L 2882099 2882135 chr3L 2882199 2882236 9 101 5.0 4.0 4.5 1.6 137 chr3L 2882099 intergenic not near genes chr3L 2882168 intergenic not near genes chr3L 2882236 intergenic not near genes chr3L_9_2880001 chr3L_2880001 RAL-57 1069 chr3L 2927815 2927871 chr3L 2936117 2936173 Tirant 16 8301 3.0 1.0 2.0 5.3 8358 chr3L 2927815 intron Shab + chr3L 2931994 intron Shab + chr3L 2936173 intron Shab + chr3L_16_2930001 chr3L_2930001 RAL-57 1070 chr3L 3027584 3027632 chr3L 3028607 3028658 8 1026 0.0 2.5 1.2 3.6 1074 chr3L 3027584 intergenic not near genes chr3L 3028121 intergenic not near genes chr3L 3028658 intergenic not near genes chr3L_8_3025001 chr3L_3025001 RAL-57 1071 chr3L 3040305 3040329 chr3L 3042119 3042139 S-element 10 1811 12.5 0.0 6.2 1.4 1834 chr3L 3040305 3` UTR CG2162 + chr3L 3041222 intergenic not near genes chr3L 3042139 intergenic Jafrac2 + chr3L_10_3040001 chr3L_3040001 RAL-57 1072 chr3L 3051722 3051743 chr3L 3051989 3052010 pogo 19 267 20.0 8.5 14.2 1.2 288 chr3L 3051722 3` UTR CG32485 + chr3L 3051866 intergenic CG32485 + chr3L 3052010 intergenic CG32485 + chr3L_19_3050001 chr3L_3050001 RAL-57 1073 chr3L 3061290 3061317 chr3L 3069878 3069903 Tirant 11 8590 9.0 16.0 12.5 0.8 8613 chr3L 3061290 intron CG32486 - chr3L 3065596 intron CG32486 - chr3L 3069903 intron CG32486 - chr3L_11_3065001 chr3L_3065001 RAL-57 1074 chr3L 3254063 3254114 chr3L 3254179 3254230 18 116 6.0 7.0 6.5 2.4 167 chr3L 3254063 5` UTR CR43626 + chr3L 3254146 5` UTR CR43626 + chr3L 3254230 5` UTR CR43626 + chr3L_18_3250001 chr3L_3250001 RAL-57 1075 chr3L 3259597 3259824 chr3L 3259717 3259949 6 119 0.0 1.0 0.5 4.0 352 chr3L 3259597 intron ckd + chr3L 3259773 intron ckd + chr3L 3259949 intron ckd + chr3L_6_3255001 chr3L_3255001 RAL-57 1076 chr3L 3281456 3281468 chr3L 3281933 3281989 Doc 9 506 0.0 5.0 2.5 2.6 533 chr3L 3281456 intron CG12017 + chr3L 3281722 intron CG12017 + chr3L 3281989 intron CG12017 + chr3L_9_3280001 chr3L_3280001 RAL-57 1077 chr3L 3317512 3317560 chr3L 3317616 3317664 5 104 0.0 3.0 1.5 2.0 152 chr3L 3317512 intergenic Drsl5 + chr3L 3317588 intergenic PIG-C -,Drsl5 + chr3L 3317664 intergenic PIG-C - chr3L_5_3315001 chr3L_3315001 RAL-57 1078 chr3L 3470134 3470189 chr3L 3470235 3470290 15 101 0.0 2.0 1.0 7.5 156 chr3L 3470134 intron CG14971 - chr3L 3470212 intron CG14971 - chr3L 3470290 intron CG14971 - chr3L_15_3470001 chr3L_3470001 RAL-57 1079 chr3L 3601275 3601316 chr3L 3606611 3606652 copia 8 5334 1.0 6.0 3.5 1.8 5377 chr3L 3601275 intron Eip63E + chr3L 3603964 intron Eip63E + chr3L 3606652 intron Eip63E + chr3L_8_3600001 chr3L_3600001 RAL-57 1080 chr3L 3610987 3611034 chr3L 3611096 3611143 12 107 2.5 1.5 2.0 4.0 156 chr3L 3610987 intergenic Eip63E + chr3L 3611065 intergenic not near genes chr3L 3611143 intergenic not near genes chr3L_12_3610001 chr3L_3610001 RAL-57 1081 chr3L 3627211 3627258 chr3L 3627341 3627388 12 130 3.0 6.5 4.8 2.1 177 chr3L 3627211 intron dar1 + chr3L 3627300 intron dar1 + chr3L 3627388 intron dar1 + chr3L_12_3625001 chr3L_3625001 RAL-57 1082 chr3L 3670551 3670599 chr3L 3670664 3670712 4 112 3.0 0.5 1.8 1.4 161 chr3L 3670551 intergenic not near genes chr3L 3670632 intergenic not near genes chr3L 3670712 intergenic not near genes chr3L_4_3670001 chr3L_3670001 RAL-57 1083 chr3L 3763740 3763747 chr3L 3763846 3763853 4 106 4.5 0.0 2.2 1.2 113 chr3L 3763740 intron CG32264 - chr3L 3763796 intron CG32264 - chr3L 3763853 intron CG32264 - chr3L_4_3760001 chr3L_3760001 RAL-57 1084 chr3L 3766712 3766737 chr3L 3766823 3766848 12 111 9.5 0.0 4.8 2.1 136 chr3L 3766712 intron CG32264 - chr3L 3766780 intron CG32264 - chr3L 3766848 intron CG32264 - chr3L_12_3765001 chr3L_3765001 RAL-57 1085 chr3L 3783248 3783263 chr3L 3783349 3783364 7 101 6.5 4.5 5.5 1.1 116 chr3L 3783248 intron CG32264 - chr3L 3783306 intron CG32264 - chr3L 3783364 intron CG32264 - chr3L_7_3780001 chr3L_3780001 RAL-57 1086 chr3L 3797220 3797266 chr3L 3797328 3797374 10 108 0.0 5.0 2.5 2.9 154 chr3L 3797220 intron CG32264 - chr3L 3797297 intron CG32264 - chr3L 3797374 intron CG32264 - chr3L_10_3795001 chr3L_3795001 RAL-57 1087 chr3L 3833713 3833770 chr3L 3833979 3834035 pogo 20 266 6.0 3.5 4.8 3.4 322 chr3L 3833713 intron enc + chr3L 3833874 intron enc + chr3L 3834035 intron enc + chr3L_20_3830001 chr3L_3830001 RAL-57 1088 chr3L 3834823 3834867 chr3L 3835061 3835105 19 238 5.5 6.0 5.8 2.8 282 chr3L 3834823 intron enc + chr3L 3834964 intron enc + chr3L 3835105 intron enc + chr3L_19_3830001 chr3L_3830001 RAL-57 1089 chr3L 3877441 3877465 chr3L 3877589 3877612 4 148 0.0 1.5 0.8 2.2 171 chr3L 3877441 intergenic not near genes chr3L 3877526 intergenic not near genes chr3L 3877612 intergenic not near genes chr3L_4_3875001 chr3L_3875001 RAL-57 1090 chr3L 3935804 3935849 chr3L 3935907 3935951 15 103 0.5 5.0 2.8 3.9 147 chr3L 3935804 5` UTR Eip63F-2 + chr3L 3935878 5` UTR Eip63F-2 + chr3L 3935951 5` UTR Eip63F-2 + chr3L_15_3935001 chr3L_3935001 RAL-57 1091 chr3L 4015710 4015765 chr3L 4015818 4015873 4 108 1.5 0.5 1.0 2.0 163 chr3L 4015710 intergenic not near genes chr3L 4015792 intergenic not near genes chr3L 4015873 intergenic not near genes chr3L_4_4015001 chr3L_4015001 RAL-57 1092 chr3L 4099459 4099490 chr3L 4099565 4099596 10 106 6.5 4.0 5.2 1.6 137 chr3L 4099459 intron CG14995 - chr3L 4099528 intron CG14995 - chr3L 4099596 intron CG14995 - chr3L_10_4095001 chr3L_4095001 RAL-57 1093 chr3L 4214514 4214549 chr3L 4214679 4214715 26 165 8.5 9.5 9.0 2.6 201 chr3L 4214514 intron CG43367 + chr3L 4214614 intron CG43367 + chr3L 4214715 intron CG43367 + chr3L_26_4210001 chr3L_4210001 RAL-57 1094 chr3L 4328728 4328757 chr3L 4336249 4336279 412 8 7521 4.0 2.5 3.2 1.9 7551 chr3L 4328728 intron Cip4 - chr3L 4332504 intron Cip4 - chr3L 4336279 exon Cip4 - chr3L_8_4330001 chr3L_4330001 RAL-57 1095 chr3L 4341331 4341331 chr3L 21448026 21448027 5 17106695 12.0 37.5 24.8 0.2 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-57 1096 chr3L 4341332 4341335 chr3L 21448023 21448026 16 17106693 11.5 37.0 24.2 0.6 17106694 chr3L 4341332 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_16_12890001 chr3L_12890001 RAL-57 1097 chr3L 4347821 4347833 chr3L 4347932 4347943 4 110 3.0 1.0 2.0 1.3 122 chr3L 4347821 intron Cip4 - chr3L 4347882 intron Cip4 - chr3L 4347943 intron Cip4 - chr3L_4_4345001 chr3L_4345001 RAL-57 1098 chr3L 4347843 4347854 chr3L 4347920 4347957 4 100 2.0 1.0 1.5 1.6 114 chr3L 4347843 intron Cip4 - chr3L 4347900 intron Cip4 - chr3L 4347957 intron Cip4 - chr3L_4_4345001 chr3L_4345001 RAL-57 1099 chr3L 4503885 4503904 chr3L 4503987 4504006 6 102 11.0 0.0 5.5 0.9 121 chr3L 4503885 intron NT1 - chr3L 4503946 intron NT1 - chr3L 4504006 intron NT1 - chr3L_6_4500001 chr3L_4500001 RAL-57 1100 chr3L 4509112 4509147 chr3L 4509286 4509320 4 174 6.5 5.0 5.8 0.6 208 chr3L 4509112 intergenic not near genes chr3L 4509216 intergenic not near genes chr3L 4509320 intergenic not near genes chr3L_4_4505001 chr3L_4505001 RAL-57 1101 chr3L 4519402 4519441 chr3L 4519504 4519539 9 99 3.5 0.0 1.8 3.2 137 chr3L 4519402 intron Tie - chr3L 4519470 intron Tie - chr3L 4519539 intron Tie - chr3L_9_4515001 chr3L_4515001 RAL-57 1102 chr3L 4626283 4626331 chr3L 4626635 4626683 9 352 2.5 3.0 2.8 2.4 400 chr3L 4626283 intergenic Src64B -,CR45438 -,Rpd3 + chr3L 4626483 intergenic CR45438 -,Rpd3 +,Src64B - chr3L 4626683 3` UTR CR45438 - chr3L_9_4625001 chr3L_4625001 RAL-57 1103 chr3L 4629602 4629623 chr3L 4629795 4629818 4 194 2.5 11.0 6.8 0.5 216 chr3L 4629602 intergenic axo -,Rpd3 + chr3L 4629710 3` UTR axo - chr3L 4629818 exon axo - chr3L_4_4625001 chr3L_4625001 RAL-57 1104 chr3L 4629626 4629632 chr3L 4629787 4629827 4 171 2.5 11.0 6.8 0.5 201 chr3L 4629626 3` UTR axo - chr3L 4629726 3` UTR axo - chr3L 4629827 exon axo - chr3L_4_4625001 chr3L_4625001 RAL-57 1105 chr3L 4639908 4639938 chr3L 4640000 4640050 5 108 1.0 3.0 2.0 1.7 142 chr3L 4639908 intron axo - chr3L 4639979 intron axo - chr3L 4640050 intron axo - chr3L_5_4635001 chr3L_4635001 RAL-57 1106 chr3L 4699278 4699315 chr3L 4699383 4699420 5 105 0.0 1.0 0.5 3.3 142 chr3L 4699278 intron RhoGEF64C + chr3L 4699349 intron RhoGEF64C + chr3L 4699420 intron RhoGEF64C + chr3L_5_4695001 chr3L_4695001 RAL-57 1107 chr3L 4748709 4748732 chr3L 4748810 4748844 6 110 2.5 4.5 3.5 1.3 135 chr3L 4748709 intron RhoGEF64C + chr3L 4748776 intron RhoGEF64C + chr3L 4748844 intron RhoGEF64C + chr3L_6_4745001 chr3L_4745001 RAL-57 1108 chr3L 4837866 4837919 chr3L 4837970 4838011 25 100 2.5 4.0 3.2 6.0 145 chr3L 4837866 3` UTR CG13707 - chr3L 4837938 3` UTR CG13707 - chr3L 4838011 3` UTR CG13707 - chr3L_25_4835001 chr3L_4835001 RAL-57 1109 chr3L 4840375 4840421 chr3L 4840499 4840555 13 130 2.5 7.0 4.8 2.2 180 chr3L 4840375 intergenic CG13707 - chr3L 4840465 intergenic CG13707 - chr3L 4840555 intergenic CG13707 - chr3L_13_4840001 chr3L_4840001 RAL-57 1110 chr3L 4858283 4858326 chr3L 4858398 4858441 22 112 10.0 13.5 11.8 1.7 158 chr3L 4858283 intergenic not near genes chr3L 4858362 intergenic not near genes chr3L 4858441 intergenic not near genes chr3L_22_4855001 chr3L_4855001 RAL-57 1111 chr3L 4901108 4901140 chr3L 4907323 4907339 diver 12 6212 9.0 3.5 6.2 1.7 6231 chr3L 4901108 intergenic CG13704 + chr3L 4904224 intergenic not near genes chr3L 4907339 intergenic not near genes chr3L_12_4900001 chr3L_4900001 RAL-57 1112 chr3L 5045447 5045478 chr3L 5050253 5050284 Doc 4 4806 1.0 2.5 1.8 1.4 4837 chr3L 5045447 intron Con - chr3L 5047866 intron Con - chr3L 5050284 intron Con - chr3L_4_5045001 chr3L_5045001 RAL-57 1113 chr3L 5101175 5101230 chr3L 5101280 5101335 9 104 1.5 4.5 3.0 2.2 160 chr3L 5101175 intergenic not near genes chr3L 5101255 intergenic not near genes chr3L 5101335 intergenic not near genes chr3L_9_5100001 chr3L_5100001 RAL-57 1114 chr3L 5103586 5103609 chr3L 5103691 5103714 7 105 4.5 0.0 2.2 2.2 128 chr3L 5103586 intergenic not near genes chr3L 5103650 intergenic not near genes chr3L 5103714 intergenic not near genes chr3L_7_5100001 chr3L_5100001 RAL-57 1115 chr3L 5104473 5104511 chr3L 5124632 5124669 11 20159 0.0 6.5 3.2 2.6 20196 chr3L 5104473 intergenic not near genes chr3L 5114571 intergenic not near genes chr3L 5124669 intergenic not near genes chr3L_11_5110001 chr3L_5110001 RAL-57 1116 chr3L 5215930 5215954 chr3L 5216041 5216045 5 102 14.0 0.0 7.0 0.6 115 chr3L 5215930 intron shep - chr3L 5215988 intron shep - chr3L 5216045 intron shep - chr3L_5_5215001 chr3L_5215001 RAL-57 1117 chr3L 5220802 5220860 chr3L 5220922 5220980 20 120 6.5 1.0 3.8 4.2 178 chr3L 5220802 intron shep - chr3L 5220891 intron shep - chr3L 5220980 intron shep - chr3L_20_5220001 chr3L_5220001 RAL-57 1118 chr3L 5251845 5251867 chr3L 5251949 5251971 4 104 0.0 2.5 1.2 1.8 126 chr3L 5251845 intron shep - chr3L 5251908 intron shep - chr3L 5251971 intron shep - chr3L_4_5250001 chr3L_5250001 RAL-57 1119 chr3L 5271173 5271191 chr3L 5271276 5271294 12 102 3.0 16.5 9.8 1.1 121 chr3L 5271173 intron shep - chr3L 5271234 intron shep - chr3L 5271294 intron shep - chr3L_12_5270001 chr3L_5270001 RAL-57 1120 chr3L 5271192 5271201 chr3L 5271275 5271303 9 99 3.0 16.5 9.8 0.8 111 chr3L 5271192 intron shep - chr3L 5271248 intron shep - chr3L 5271303 intron shep - chr3L_9_5270001 chr3L_5270001 RAL-57 1121 chr3L 5327436 5327476 chr3L 5327546 5327586 5 109 0.5 2.0 1.2 2.3 150 chr3L 5327436 intergenic not near genes chr3L 5327511 intergenic not near genes chr3L 5327586 intergenic not near genes chr3L_5_5325001 chr3L_5325001 RAL-57 1122 chr3L 5351081 5351126 chr3L 5351191 5351236 4 110 2.0 2.0 2.0 1.3 155 chr3L 5351081 intron lama - chr3L 5351158 intron lama - chr3L 5351236 intron lama - chr3L_4_5350001 chr3L_5350001 RAL-57 1123 chr3L 5381818 5381836 chr3L 5381922 5381930 9 103 15.0 15.0 15.0 0.6 112 chr3L 5381818 exon Ir64a - chr3L 5381874 exon Ir64a - chr3L 5381930 exon Ir64a - chr3L_9_5380001 chr3L_5380001 RAL-57 1124 chr3L 5381844 5381862 chr3L 5381909 5381945 10 82 9.5 12.0 10.8 0.8 101 chr3L 5381844 exon Ir64a - chr3L 5381894 exon Ir64a - chr3L 5381945 exon Ir64a - chr3L_10_5380001 chr3L_5380001 RAL-57 1125 chr3L 5384320 5384346 chr3L 5384395 5384436 10 94 6.5 9.5 8.0 1.1 116 chr3L 5384320 intergenic not near genes chr3L 5384378 intergenic not near genes chr3L 5384436 intergenic not near genes chr3L_10_5380001 chr3L_5380001 RAL-57 1126 chr3L 5399571 5399577 chr3L 5399683 5399688 4 112 2.0 0.0 1.0 2.0 117 chr3L 5399571 intergenic not near genes chr3L 5399630 intergenic not near genes chr3L 5399688 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-57 1127 chr3L 5537696 5537751 chr3L 5538063 5538109 jockey 15 364 5.5 11.0 8.2 1.6 413 chr3L 5537696 intergenic not near genes chr3L 5537902 intergenic not near genes chr3L 5538109 intergenic CG10625 - chr3L_15_5535001 chr3L_5535001 RAL-57 1128 chr3L 5675163 5675178 chr3L 5675284 5675287 6 119 35.0 10.5 22.8 0.3 124 chr3L 5675163 exon sif + chr3L 5675225 intron sif + chr3L 5675287 intron sif + chr3L_6_5675001 chr3L_5675001 RAL-57 1129 chr3L 5675182 5675186 chr3L 5675283 5675283 7 113 31.5 10.0 20.8 0.3 101 chr3L 5675182 exon sif + chr3L 5675232 intron sif + chr3L 5675283 intron sif + chr3L_7_5675001 chr3L_5675001 RAL-57 1130 chr3L 5675188 5675220 chr3L 5675279 5675300 40 106 15.5 8.5 12.0 3.1 112 chr3L 5675188 exon sif + chr3L 5675244 intron sif + chr3L 5675300 intron sif + chr3L_40_5675001 chr3L_5675001 RAL-57 1131 chr3L 5677164 5677201 chr3L 5677265 5677301 8 101 0.0 6.5 3.2 1.9 137 chr3L 5677164 intron sif + chr3L 5677232 intron sif + chr3L 5677301 intron sif + chr3L_8_5675001 chr3L_5675001 RAL-57 1132 chr3L 5727183 5727196 chr3L 5727646 5727694 7 487 3.5 4.5 4.0 1.4 511 chr3L 5727183 intron sif + chr3L 5727438 intron sif + chr3L 5727694 intron sif + chr3L_7_5725001 chr3L_5725001 RAL-57 1133 chr3L 5770754 5770756 chr3L 15253229 15253229 4 9482474 47.5 9.0 28.2 0.1 9482475 chr3L 5770754 intron scny + chr3L 10511992 intron A2bp1 + chr3L 15253229 intergenic not near genes chr3L_4_10510001 chr3L_10510001 RAL-57 1134 chr3L 5836372 5836411 chr3L 5836478 5836511 11 105 2.0 5.0 3.5 2.4 139 chr3L 5836372 intron vn - chr3L 5836442 intron vn - chr3L 5836511 intron vn - chr3L_11_5835001 chr3L_5835001 RAL-57 1135 chr3L 5910015 5910055 chr3L 5910281 5910321 pogo 13 266 5.0 4.5 4.8 2.2 306 chr3L 5910015 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910321 intron CG13288 + chr3L_13_5910001 chr3L_5910001 RAL-57 1136 chr3L 5926300 5926302 chr3L 5926508 5926517 4 210 17.0 13.5 15.2 0.2 217 chr3L 5926300 intron Vap-33B + chr3L 5926408 intron Vap-33B + chr3L 5926517 intron Vap-33B + chr3L_4_5925001 chr3L_5925001 RAL-57 1137 chr3L 5926306 5926347 chr3L 5926503 5926559 BS 17 207 5.0 12.5 8.8 1.7 253 chr3L 5926306 intron Vap-33B + chr3L 5926432 intron Vap-33B + chr3L 5926559 intron Vap-33B + chr3L_17_5925001 chr3L_5925001 RAL-57 1138 chr3L 6001678 6001707 chr3L 6004403 6004432 jockey 6 2725 1.5 3.0 2.2 1.9 2754 chr3L 6001678 intron PVRAP + chr3L 6003055 intron PVRAP + chr3L 6004432 intron PVRAP + chr3L_6_6000001 chr3L_6000001 RAL-57 1139 chr3L 6040343 6040391 chr3L 6042724 6042772 Doc 26 2380 7.0 6.5 6.8 3.3 2429 chr3L 6040343 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042772 intergenic not near genes chr3L_26_6040001 chr3L_6040001 RAL-57 1140 chr3L 6052646 6052647 chr3L 6052733 6052757 5 97 31.0 22.5 26.8 0.2 111 chr3L 6052646 exon Jon65Aii + chr3L 6052702 intron Jon65Aii + chr3L 6052757 exon Jon65Aii + chr3L_5_6050001 chr3L_6050001 RAL-57 1141 chr3L 6052649 6052668 chr3L 6052732 6052755 30 99 23.5 22.0 22.8 1.3 106 chr3L 6052649 exon Jon65Aii + chr3L 6052702 intron Jon65Aii + chr3L 6052755 exon Jon65Aii + chr3L_30_6050001 chr3L_6050001 RAL-57 1142 chr3L 6063299 6063348 chr3L 6063447 6063499 14 148 0.0 8.0 4.0 2.8 200 chr3L 6063299 intergenic CG10472 - chr3L 6063399 intergenic CG10472 - chr3L 6063499 intergenic not near genes chr3L_14_6060001 chr3L_6060001 RAL-57 1143 chr3L 6116692 6116726 chr3L 6116801 6116835 8 109 2.0 4.5 3.2 1.9 143 chr3L 6116692 intron Ets65A + chr3L 6116764 intron Ets65A + chr3L 6116835 intron Ets65A + chr3L_8_6115001 chr3L_6115001 RAL-57 1144 chr3L 6155687 6155711 chr3L 6155798 6155822 4 111 6.5 4.5 5.5 0.6 135 chr3L 6155687 intergenic CR45421 - chr3L 6155754 intergenic not near genes chr3L 6155822 intergenic not near genes chr3L_4_6155001 chr3L_6155001 RAL-57 1145 chr3L 6159921 6159975 chr3L 6160026 6160089 9 107 5.5 0.0 2.8 2.4 168 chr3L 6159921 intergenic not near genes chr3L 6160005 intergenic not near genes chr3L 6160089 intergenic not near genes chr3L_9_6160001 chr3L_6160001 RAL-57 1146 chr3L 6220892 6220942 chr3L 6230065 6230118 roo 7 9176 1.5 1.0 1.2 3.2 9226 chr3L 6220892 5` UTR pncr008:3L + chr3L 6225505 intergenic not near genes chr3L 6230118 intergenic not near genes chr3L_7_6225001 chr3L_6225001 RAL-57 1147 chr3L 6278188 6278235 chr3L 6278288 6278336 12 91 7.5 0.0 3.8 2.5 148 chr3L 6278188 intergenic not near genes chr3L 6278262 intergenic not near genes chr3L 6278336 intergenic not near genes chr3L_12_6275001 chr3L_6275001 RAL-57 1148 chr3L 6335008 6335043 chr3L 6335498 6335539 297 12 494 2.5 6.0 4.2 2.3 531 chr3L 6335008 intron CG13300 - chr3L 6335274 intron CG13300 - chr3L 6335539 intron CG13300 - chr3L_12_6335001 chr3L_6335001 RAL-57 1149 chr3L 6405640 6405680 chr3L 6432129 6432162 roo 10 26488 2.5 2.0 2.2 3.1 26522 chr3L 6405640 intron CG42747 + chr3L 6418901 intron CG42747 + chr3L 6432162 intron CG42747 + chr3L_10_6415001 chr3L_6415001 RAL-57 1150 chr3L 6573658 6573685 chr3L 6573760 6573811 14 120 2.0 8.5 5.2 2.3 153 chr3L 6573658 intron,intron CG18769 +,jv - chr3L 6573734 intron,intron CG18769 +,jv - chr3L 6573811 intron,intron CG18769 +,jv - chr3L_14_6570001 chr3L_6570001 RAL-57 1151 chr3L 6620608 6620612 chr3L 6621053 6621067 Rt1c 4 452 3.5 5.5 4.5 0.7 459 chr3L 6620608 intergenic not near genes chr3L 6620838 intergenic not near genes chr3L 6621067 intergenic not near genes chr3L_4_6620001 chr3L_6620001 RAL-57 1152 chr3L 6659309 6659353 chr3L 6659406 6659455 5 101 0.0 2.5 1.2 2.3 146 chr3L 6659309 intergenic not near genes chr3L 6659382 intergenic not near genes chr3L 6659455 intergenic not near genes chr3L_5_6655001 chr3L_6655001 RAL-57 1153 chr3L 6668954 6668983 chr3L 6669057 6669089 8 105 2.0 0.0 1.0 4.0 135 chr3L 6668954 intergenic not near genes chr3L 6669022 intergenic not near genes chr3L 6669089 intergenic not near genes chr3L_8_6665001 chr3L_6665001 RAL-57 1154 chr3L 6974484 6974510 chr3L 6974610 6974635 6 125 6.5 8.0 7.2 0.7 151 chr3L 6974484 intron Galphai - chr3L 6974560 intron Galphai - chr3L 6974635 intron Galphai - chr3L_6_6970001 chr3L_6970001 RAL-57 1155 chr3L 6994888 6994906 chr3L 6995522 6995541 BS 11 635 0.0 6.5 3.2 2.6 653 chr3L 6994888 intergenic bin + chr3L 6995214 intergenic not near genes chr3L 6995541 intergenic not near genes chr3L_11_6995001 chr3L_6995001 RAL-57 1156 chr3L 7013433 7013466 chr3L 7013546 7013594 6 118 5.0 0.0 2.5 1.7 161 chr3L 7013433 intron Mp + chr3L 7013514 intron Mp + chr3L 7013594 intron Mp + chr3L_6_7010001 chr3L_7010001 RAL-57 1157 chr3L 7023391 7023397 chr3L 7023510 7023516 4 118 6.0 2.0 4.0 0.8 125 chr3L 7023391 intron Mp + chr3L 7023454 intron Mp + chr3L 7023516 intron Mp + chr3L_4_7020001 chr3L_7020001 RAL-57 1158 chr3L 7038368 7038377 chr3L 7038470 7038479 4 102 17.5 8.5 13.0 0.3 111 chr3L 7038368 intron Mp + chr3L 7038424 intron Mp + chr3L 7038479 intron Mp + chr3L_4_7035001 chr3L_7035001 RAL-57 1159 chr3L 7061381 7061407 chr3L 7061492 7061518 13 111 7.0 9.5 8.2 1.4 137 chr3L 7061381 intron CG8641 - chr3L 7061450 intron CG8641 - chr3L 7061518 intron CG8641 - chr3L_13_7060001 chr3L_7060001 RAL-57 1160 chr3L 7112564 7112610 chr3L 7112676 7112722 19 112 6.0 9.0 7.5 2.2 158 chr3L 7112564 intron form3 + chr3L 7112643 intron form3 + chr3L 7112722 intron form3 + chr3L_19_7110001 chr3L_7110001 RAL-57 1161 chr3L 7150881 7150899 chr3L 7150966 7151000 6 98 2.5 2.5 2.5 1.7 119 chr3L 7150881 intron corn - chr3L 7150940 intron corn - chr3L 7151000 intron corn - chr3L_6_7150001 chr3L_7150001 RAL-57 1162 chr3L 7201270 7201271 chr3L 21448026 21448026 7 14246756 12.5 37.5 25.0 0.3 14246756 chr3L 7201270 intergenic not near genes chr3L 14324648 intron,intron fz +,CR45025 - chr3L 21448026 3` UTR Syx7 + chr3L_7_14320001 chr3L_14320001 RAL-57 1163 chr3L 7236607 7236622 chr3L 7236808 7236823 6 199 3.0 3.5 3.2 1.4 216 chr3L 7236607 intergenic CG14829 - chr3L 7236715 intergenic CG14829 - chr3L 7236823 3` UTR CG14829 - chr3L_6_7235001 chr3L_7235001 RAL-57 1164 chr3L 7254771 7254820 chr3L 7254932 7254981 12 157 3.0 2.0 2.5 3.4 210 chr3L 7254771 intron CG14830 - chr3L 7254876 intron CG14830 - chr3L 7254981 intron CG14830 - chr3L_12_7250001 chr3L_7250001 RAL-57 1165 chr3L 7276159 7276173 chr3L 7276238 7276275 9 94 5.5 11.0 8.2 1.0 116 chr3L 7276159 intron unc-13-4A - chr3L 7276217 intron unc-13-4A - chr3L 7276275 intron unc-13-4A - chr3L_9_7275001 chr3L_7275001 RAL-57 1166 chr3L 7285426 7285475 chr3L 7285528 7285578 15 103 8.5 7.5 8.0 1.7 152 chr3L 7285426 intron unc-13-4A - chr3L 7285502 intron unc-13-4A - chr3L 7285578 intron unc-13-4A - chr3L_15_7285001 chr3L_7285001 RAL-57 1167 chr3L 7315992 7316001 chr3L 7316106 7316114 6 114 19.5 1.5 10.5 0.5 122 chr3L 7315992 intergenic not near genes chr3L 7316053 intergenic not near genes chr3L 7316114 intergenic not near genes chr3L_6_7315001 chr3L_7315001 RAL-57 1168 chr3L 7358272 7358326 chr3L 7359578 7359635 25 1303 54.0 74.0 64.0 0.4 1363 chr3L 7358272 exon pst - chr3L 7358954 exon pst - chr3L 7359635 intron pst - chr3L_25_7355001 chr3L_7355001 RAL-57 1169 chr3L 7357182 7357194 chr3L 7360277 7360289 8 3096 30.5 29.0 29.8 0.3 3107 chr3L 7357182 intergenic pst -,CTCF - chr3L 7358736 exon pst - chr3L 7360289 intergenic pst -,Sec63 + chr3L_8_7355001 chr3L_7355001 RAL-57 1170 chr3L 7377292 7377344 chr3L 7380422 7380474 297 14 3129 3.5 8.5 6.0 2.0 3182 chr3L 7377292 intron SMSr - chr3L 7378883 intron SMSr - chr3L 7380474 intron SMSr - chr3L_14_7375001 chr3L_7375001 RAL-57 1171 chr3L 7444001 7444046 chr3L 7444124 7444151 6 120 2.5 0.0 1.2 2.7 150 chr3L 7444001 intron CG42458 + chr3L 7444076 intron CG42458 + chr3L 7444151 intron CG42458 + chr3L_6_7440001 chr3L_7440001 RAL-57 1172 chr3L 7450677 7450719 chr3L 7450785 7450824 12 106 4.0 7.0 5.5 1.8 147 chr3L 7450677 intron CG42458 + chr3L 7450750 intron CG42458 + chr3L 7450824 intron CG42458 + chr3L_12_7450001 chr3L_7450001 RAL-57 1173 chr3L 7505427 7505440 chr3L 7505529 7505542 5 102 2.0 6.0 4.0 1.0 115 chr3L 7505427 intergenic CG7548 - chr3L 7505484 intergenic CG7548 - chr3L 7505542 3` UTR CG7548 - chr3L_5_7505001 chr3L_7505001 RAL-57 1174 chr3L 7508653 7508706 chr3L 7508762 7508814 14 108 5.0 1.0 3.0 3.5 161 chr3L 7508653 intergenic not near genes chr3L 7508734 intergenic not near genes chr3L 7508814 intergenic not near genes chr3L_14_7505001 chr3L_7505001 RAL-57 1175 chr3L 7574190 7574239 chr3L 7574295 7574312 4 97 2.5 1.0 1.8 1.4 122 chr3L 7574190 intergenic not near genes chr3L 7574251 intergenic not near genes chr3L 7574312 intergenic not near genes chr3L_4_7570001 chr3L_7570001 RAL-57 1176 chr3L 7576206 7576239 chr3L 7576319 7576351 5 113 0.0 3.5 1.8 1.8 145 chr3L 7576206 intergenic not near genes chr3L 7576278 intergenic not near genes chr3L 7576351 intergenic not near genes chr3L_5_7575001 chr3L_7575001 RAL-57 1177 chr3L 7591125 7591154 chr3L 7591240 7591240 4 104 8.5 4.5 6.5 0.5 115 chr3L 7591125 intergenic CG7716 - chr3L 7591182 intergenic CG7716 - chr3L 7591240 intergenic CG7716 - chr3L_4_7590001 chr3L_7590001 RAL-57 1178 chr3L 7591158 7591181 chr3L 7591235 7591257 5 80 4.0 2.5 3.2 1.2 99 chr3L 7591158 intergenic CG7716 - chr3L 7591208 intergenic CG7716 - chr3L 7591257 intergenic CG7716 - chr3L_5_7590001 chr3L_7590001 RAL-57 1179 chr3L 7650518 7650563 chr3L 7650702 7650747 11 183 2.5 0.0 1.2 5.0 229 chr3L 7650518 intergenic CG32373 + chr3L 7650632 5` UTR CG32373 + chr3L 7650747 5` UTR CG32373 + chr3L_11_7650001 chr3L_7650001 RAL-57 1180 chr3L 7749470 7749471 chr3L 11777678 11777678 8 4028207 13.0 40.5 26.8 0.3 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_8_9760001 chr3L_9760001 RAL-57 1181 chr3L 7792031 7792079 chr3L 7792140 7792188 9 109 3.0 2.0 2.5 2.6 157 chr3L 7792031 intron CG32369 - chr3L 7792110 intron CG32369 - chr3L 7792188 intron CG32369 - chr3L_9_7790001 chr3L_7790001 RAL-57 1182 chr3L 7793692 7793739 chr3L 7800769 7800816 297 8 7076 3.0 6.5 4.8 1.4 7124 chr3L 7793692 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800816 intron CG32369 - chr3L_8_7795001 chr3L_7795001 RAL-57 1183 chr3L 7835390 7835447 chr3L 7835493 7835550 28 100 9.0 3.0 6.0 4.0 160 chr3L 7835390 intron Pdp1 - chr3L 7835470 intron Pdp1 - chr3L 7835550 intron Pdp1 - chr3L_28_7835001 chr3L_7835001 RAL-57 1184 chr3L 7855406 7855452 chr3L 7855520 7855564 7 114 6.5 2.0 4.2 1.3 158 chr3L 7855406 intron Pdp1 - chr3L 7855485 intron Pdp1 - chr3L 7855564 intron Pdp1 - chr3L_7_7855001 chr3L_7855001 RAL-57 1185 chr3L 7868577 7868584 chr3L 7868681 7868688 5 104 0.0 6.0 3.0 1.2 111 chr3L 7868577 intergenic CG32365 + chr3L 7868632 intergenic CG32365 + chr3L 7868688 intergenic CG32365 + chr3L_5_7865001 chr3L_7865001 RAL-57 1186 chr3L 7886494 7886534 chr3L 7889037 7889077 Stalker4 8 2541 0.5 1.0 0.8 4.4 2583 chr3L 7886494 intron CG32365 + chr3L 7887786 intron CG32365 + chr3L 7889077 intron CG32365 + chr3L_8_7885001 chr3L_7885001 RAL-57 1187 chr3L 7916815 7916852 chr3L 7926011 7926048 roo 9 9196 4.0 5.0 4.5 1.6 9233 chr3L 7916815 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926048 3` UTR syd - chr3L_9_7920001 chr3L_7920001 RAL-57 1188 chr3L 7985346 7985389 chr3L 7987699 7987742 NOF 11 2353 3.5 6.0 4.8 1.9 2396 chr3L 7985346 intron nmo + chr3L 7986544 intron nmo + chr3L 7987742 intron nmo + chr3L_11_7985001 chr3L_7985001 RAL-57 1189 chr3L 8041529 8041562 chr3L 8041631 8041665 5 103 3.0 2.0 2.5 1.4 136 chr3L 8041529 intron nmo + chr3L 8041597 intron nmo + chr3L 8041665 intron nmo + chr3L_5_8040001 chr3L_8040001 RAL-57 1190 chr3L 8075334 8075356 chr3L 8075445 8075467 5 111 10.5 4.5 7.5 0.6 133 chr3L 8075334 intron Ect4 + chr3L 8075400 intron Ect4 + chr3L 8075467 intron Ect4 + chr3L_5_8075001 chr3L_8075001 RAL-57 1191 chr3L 8224268 8224283 chr3L 8224376 8224393 7 107 17.0 6.5 11.8 0.5 125 chr3L 8224268 intergenic not near genes chr3L 8224330 intergenic not near genes chr3L 8224393 intergenic not near genes chr3L_7_8220001 chr3L_8220001 RAL-57 1192 chr3L 8233567 8233583 chr3L 8238854 8238870 Rt1a 8 5286 10.5 19.5 15.0 0.5 5303 chr3L 8233567 intron CG7213 - chr3L 8236218 intron CG7213 - chr3L 8238870 intron,intron CG7213 -,Dscam4 + chr3L_8_8235001 chr3L_8235001 RAL-57 1193 chr3L 8275258 8275315 chr3L 8275360 8275381 17 89 13.0 12.0 12.5 1.3 123 chr3L 8275258 intron Dscam4 + chr3L 8275320 intron Dscam4 + chr3L 8275381 intron Dscam4 + chr3L_17_8275001 chr3L_8275001 RAL-57 1194 chr3L 8295781 8295816 chr3L 8295964 8295999 8 183 5.0 4.0 4.5 1.5 218 chr3L 8295781 intergenic CG7201 - chr3L 8295890 intergenic not near genes chr3L 8295999 intergenic not near genes chr3L_8_8295001 chr3L_8295001 RAL-57 1195 chr3L 8317596 8317596 chr3L 22908066 22908066 4 14590470 5.0 17.5 11.2 0.3 14590470 chr3L 8317596 intergenic not near genes chr3L 15612831 intergenic CG13449 -,comm3 - chr3L 22908066 intergenic not near genes chr3L_4_15610001 chr3L_15610001 RAL-57 1196 chr3L 8364505 8364536 chr3L 8364621 8364652 7 116 4.0 1.5 2.8 1.8 147 chr3L 8364505 intergenic not near genes chr3L 8364578 intergenic not near genes chr3L 8364652 intergenic not near genes chr3L_7_8360001 chr3L_8360001 RAL-57 1197 chr3L 8394022 8394058 chr3L 8394123 8394159 23 101 3.5 4.5 4.0 4.6 137 chr3L 8394022 intergenic Jon66Cii - chr3L 8394090 intergenic Jon66Cii - chr3L 8394159 intergenic not near genes chr3L_23_8390001 chr3L_8390001 RAL-57 1198 chr3L 8395835 8395855 chr3L 8395928 8395976 7 104 13.5 5.0 9.2 0.7 141 chr3L 8395835 intergenic CG7120 + chr3L 8395906 intergenic CG7120 + chr3L 8395976 intergenic CG7120 + chr3L_7_8395001 chr3L_8395001 RAL-57 1199 chr3L 8451356 8451410 chr3L 8451468 8451513 16 111 0.0 9.0 4.5 2.9 157 chr3L 8451356 intron Gug + chr3L 8451434 intron Gug + chr3L 8451513 intron Gug + chr3L_16_8450001 chr3L_8450001 RAL-57 1200 chr3L 8456471 8456482 chr3L 8456568 8456600 4 107 13.0 12.5 12.8 0.3 129 chr3L 8456471 intron Gug + chr3L 8456536 intron Gug + chr3L 8456600 intron Gug + chr3L_4_8455001 chr3L_8455001 RAL-57 1201 chr3L 8481781 8481797 chr3L 8490965 8490970 roo 7 9181 14.5 17.5 16.0 0.4 9189 chr3L 8481781 intron CG43163 - chr3L 8486376 intron CG43163 - chr3L 8490970 intron CG43163 - chr3L_7_8485001 chr3L_8485001 RAL-57 1202 chr3L 8498300 8498316 chr3L 8505779 8505808 blood 4 7488 2.0 2.5 2.2 1.2 7508 chr3L 8498300 intron CG43163 - chr3L 8502054 intron CG43163 - chr3L 8505808 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-57 1203 chr3L 8558641 8558694 chr3L 8558757 8558810 15 116 7.5 8.5 8.0 1.7 169 chr3L 8558641 intron rhea + chr3L 8558726 intron rhea + chr3L 8558810 intron rhea + chr3L_15_8555001 chr3L_8555001 RAL-57 1204 chr3L 8782100 8782143 chr3L 8782251 8782294 13 151 1.5 4.0 2.8 3.4 194 chr3L 8782100 intron Fhos + chr3L 8782197 intron Fhos + chr3L 8782294 intron Fhos + chr3L_13_8780001 chr3L_8780001 RAL-57 1205 chr3L 8784836 8784860 chr3L 8784944 8784968 6 108 3.0 3.0 3.0 1.5 132 chr3L 8784836 intron Fhos + chr3L 8784902 intron Fhos + chr3L 8784968 intron Fhos + chr3L_6_8780001 chr3L_8780001 RAL-57 1206 chr3L 8791251 8791307 chr3L 8796696 8796751 I-element 10 5444 7.5 0.0 3.8 2.1 5500 chr3L 8791251 exon Fhos + chr3L 8794001 intron Fhos + chr3L 8796751 intron Fhos + chr3L_10_8790001 chr3L_8790001 RAL-57 1207 chr3L 8839732 8839743 chr3L 8839837 8839848 6 105 0.5 4.0 2.2 1.9 116 chr3L 8839732 intron dally + chr3L 8839790 intron dally + chr3L 8839848 intron dally + chr3L_6_8835001 chr3L_8835001 RAL-57 1208 chr3L 8862782 8862798 chr3L 8862883 8862900 4 102 0.5 2.5 1.5 1.6 118 chr3L 8862782 intron dally + chr3L 8862841 intron dally + chr3L 8862900 intron dally + chr3L_4_8860001 chr3L_8860001 RAL-57 1209 chr3L 8890170 8890193 chr3L 8890308 8890331 8 138 4.0 2.5 3.2 1.9 161 chr3L 8890170 3` UTR dally + chr3L 8890250 3` UTR dally + chr3L 8890331 3` UTR dally + chr3L_8_8890001 chr3L_8890001 RAL-57 1210 chr3L 8950527 8950580 chr3L 8950646 8950698 11 119 7.0 4.5 5.8 1.6 171 chr3L 8950527 intron,intron CG43783 -,orb2 - chr3L 8950612 intron,intron CG43783 -,orb2 - chr3L 8950698 intron,intron CG43783 -,orb2 - chr3L_11_8950001 chr3L_8950001 RAL-57 1211 chr3L 9003928 9003977 chr3L 9004029 9004063 32 106 5.5 7.0 6.2 4.4 135 chr3L 9003928 intergenic not near genes chr3L 9003996 intergenic not near genes chr3L 9004063 intergenic not near genes chr3L_32_9000001 chr3L_9000001 RAL-57 1212 chr3L 9011108 9011153 chr3L 9011219 9011265 9 111 1.5 2.0 1.8 3.2 157 chr3L 9011108 intergenic not near genes chr3L 9011186 intergenic not near genes chr3L 9011265 intergenic not near genes chr3L_9_9010001 chr3L_9010001 RAL-57 1213 chr3L 9013691 9013692 chr3L 18417066 18417066 5 9403375 75.0 13.0 44.0 0.1 9403375 chr3L 9013691 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-57 1214 chr3L 9076912 9076952 chr3L 9084495 9084536 412 5 7584 2.0 1.5 1.8 1.8 7624 chr3L 9076912 exon Tequila + chr3L 9080724 intron Tequila + chr3L 9084536 exon Tequila + chr3L_5_9080001 chr3L_9080001 RAL-57 1215 chr3L 9128174 9128220 chr3L 9128284 9128330 30 110 7.5 8.5 8.0 3.3 156 chr3L 9128174 intron bol - chr3L 9128252 intron bol - chr3L 9128330 intron bol - chr3L_30_9125001 chr3L_9125001 RAL-57 1216 chr3L 9130533 9130581 chr3L 9134319 9134367 412 23 3783 9.0 6.5 7.8 2.6 3834 chr3L 9130533 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134367 intergenic Dhpr + chr3L_23_9130001 chr3L_9130001 RAL-57 1217 chr3L 9164687 9164708 chr3L 9166167 9166199 hobo 7 1490 3.5 0.0 1.8 2.5 1512 chr3L 9164687 intron Rdl - chr3L 9165443 intron Rdl - chr3L 9166199 intron Rdl - chr3L_7_9165001 chr3L_9165001 RAL-57 1218 chr3L 9219256 9219272 chr3L 9219911 9219933 jockey 8 668 3.0 3.0 3.0 2.0 677 chr3L 9219256 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219933 intergenic not near genes chr3L_8_9215001 chr3L_9215001 RAL-57 1219 chr3L 9270596 9270650 chr3L 9278376 9278390 roo 21 7772 6.0 10.5 8.2 2.3 7794 chr3L 9270596 intron GluRIB + chr3L 9274493 intron GluRIB + chr3L 9278390 exon GluRIB + chr3L_21_9270001 chr3L_9270001 RAL-57 1220 chr3L 9290028 9290053 chr3L 9290129 9290154 11 101 2.0 0.0 1.0 5.5 126 chr3L 9290028 intergenic not near genes chr3L 9290091 intergenic not near genes chr3L 9290154 intergenic not near genes chr3L_11_9290001 chr3L_9290001 RAL-57 1221 chr3L 9307795 9307795 chr3L 18417066 18417066 17 9109271 7.5 13.0 10.2 1.5 9109271 chr3L 9307795 intergenic not near genes chr3L 13862430 intron CG8745 - chr3L 18417066 intergenic not near genes chr3L_17_13860001 chr3L_13860001 RAL-57 1222 chr3L 9307795 9307795 chr3L 22908066 22908067 4 13600272 7.5 17.5 12.5 0.3 13600272 chr3L 9307795 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-57 1223 chr3L 9307796 9307796 chr3L 18417066 18417066 13 9109270 7.5 13.0 10.2 1.2 9109270 chr3L 9307796 intergenic not near genes chr3L 13862431 intron CG8745 - chr3L 18417066 intergenic not near genes chr3L_13_13860001 chr3L_13860001 RAL-57 1224 chr3L 9307796 9307797 chr3L 22908066 22908066 17 13600270 7.5 17.5 12.5 1.3 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_17_16105001 chr3L_16105001 RAL-57 1225 chr3L 9320390 9320424 chr3L 9320495 9320530 9 101 2.0 4.0 3.0 2.2 140 chr3L 9320390 intergenic not near genes chr3L 9320460 intergenic not near genes chr3L 9320530 intergenic not near genes chr3L_9_9320001 chr3L_9320001 RAL-57 1226 chr3L 9443495 9443539 chr3L 9445309 9445355 S-element 30 1816 6.5 10.0 8.2 3.3 1860 chr3L 9443495 intron CG33926 + chr3L 9444425 intron CG33926 + chr3L 9445355 intron CG33926 + chr3L_30_9440001 chr3L_9440001 RAL-57 1227 chr3L 9510885 9510957 chr3L 9511003 9511061 18 111 0.0 4.5 2.2 5.6 176 chr3L 9510885 intron RpS9 - chr3L 9510973 intron RpS9 - chr3L 9511061 exon RpS9 - chr3L_18_9510001 chr3L_9510001 RAL-57 1228 chr3L 9575892 9575942 chr3L 9580996 9581029 jockey 8 5099 2.0 4.0 3.0 2.0 5137 chr3L 9575892 intron CG42673 + chr3L 9578460 intron CG42673 + chr3L 9581029 intron CG42673 + chr3L_8_9575001 chr3L_9575001 RAL-57 1229 chr3L 9640175 9640186 chr3L 9640278 9640289 5 103 0.0 0.0 0.0 5.0 114 chr3L 9640175 intron fry - chr3L 9640232 intron fry - chr3L 9640289 intron fry - chr3L_5_9640001 chr3L_9640001 RAL-57 1230 chr3L 9665820 9665846 chr3L 9666061 9666087 7 241 7.0 7.0 7.0 0.9 267 chr3L 9665820 intron fry - chr3L 9665954 intron fry - chr3L 9666087 intron fry - chr3L_7_9665001 chr3L_9665001 RAL-57 1231 chr3L 9676472 9676499 chr3L 9676573 9676600 9 101 5.0 0.5 2.8 2.4 128 chr3L 9676472 intron fry - chr3L 9676536 intron fry - chr3L 9676600 intron fry - chr3L_9_9675001 chr3L_9675001 RAL-57 1232 chr3L 9699908 9699962 chr3L 9700020 9700074 24 110 6.5 9.5 8.0 2.7 166 chr3L 9699908 3` UTR UbcD4 + chr3L 9699991 3` UTR UbcD4 + chr3L 9700074 3` UTR UbcD4 + chr3L_24_9695001 chr3L_9695001 RAL-57 1233 chr3L 9715577 9715626 chr3L 9715678 9715728 37 101 9.0 16.0 12.5 2.7 151 chr3L 9715577 intron vsg + chr3L 9715652 intron vsg + chr3L 9715728 intron vsg + chr3L_37_9715001 chr3L_9715001 RAL-57 1234 chr3L 9741598 9741653 chr3L 9741715 9741770 13 117 2.0 5.5 3.8 2.7 172 chr3L 9741598 intron,intron CG42268 -,CR44348 + chr3L 9741684 intron,intron CG42268 -,CR44348 + chr3L 9741770 intron,intron CG42268 -,CR44348 + chr3L_13_9740001 chr3L_9740001 RAL-57 1235 chr3L 9750627 9750637 chr3L 9750729 9750739 6 102 6.5 2.5 4.5 1.1 112 chr3L 9750627 intron CG42268 - chr3L 9750683 intron CG42268 - chr3L 9750739 intron CG42268 - chr3L_6_9750001 chr3L_9750001 RAL-57 1236 chr3L 9809718 9809739 chr3L 9809815 9809819 5 90 8.0 9.0 8.5 0.5 101 chr3L 9809718 intergenic not near genes chr3L 9809768 intergenic not near genes chr3L 9809819 intergenic not near genes chr3L_5_9805001 chr3L_9805001 RAL-57 1237 chr3L 9848493 9848535 chr3L 9848593 9848636 4 101 3.5 0.5 2.0 1.3 143 chr3L 9848493 intron RasGAP1 - chr3L 9848564 intron RasGAP1 - chr3L 9848636 intron RasGAP1 - chr3L_4_9845001 chr3L_9845001 RAL-57 1238 chr3L 9850539 9850588 chr3L 9850642 9850691 8 103 1.0 2.0 1.5 3.2 152 chr3L 9850539 intron RasGAP1 - chr3L 9850615 intron RasGAP1 - chr3L 9850691 intron RasGAP1 - chr3L_8_9850001 chr3L_9850001 RAL-57 1239 chr3L 9929647 9929696 chr3L 9938454 9938502 roo 8 8806 4.0 2.0 3.0 2.0 8855 chr3L 9929647 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938502 intron CG34356 + chr3L_8_9930001 chr3L_9930001 RAL-57 1240 chr3L 10003130 10003181 chr3L 10003252 10003302 32 121 3.0 16.5 9.8 3.0 172 chr3L 10003130 intron dpr6 + chr3L 10003216 intron dpr6 + chr3L 10003302 intron dpr6 + chr3L_32_10000001 chr3L_10000001 RAL-57 1241 chr3L 10004089 10004114 chr3L 10004165 10004219 14 101 5.5 5.5 5.5 2.2 130 chr3L 10004089 exon dpr6 + chr3L 10004154 intron dpr6 + chr3L 10004219 intron dpr6 + chr3L_14_10000001 chr3L_10000001 RAL-57 1242 chr3L 10007165 10007205 chr3L 10007293 10007332 11 127 2.5 4.0 3.2 2.6 167 chr3L 10007165 intron dpr6 + chr3L 10007248 intron dpr6 + chr3L 10007332 intron dpr6 + chr3L_11_10005001 chr3L_10005001 RAL-57 1243 chr3L 10219221 10219268 chr3L 10219343 10219390 7 121 3.0 2.5 2.8 1.8 169 chr3L 10219221 exon CG32055 - chr3L 10219306 exon CG32055 - chr3L 10219390 exon CG32055 - chr3L_7_10215001 chr3L_10215001 RAL-57 1244 chr3L 10308729 10308753 chr3L 10308831 10308854 7 102 1.5 1.5 1.5 2.8 125 chr3L 10308729 intergenic not near genes chr3L 10308792 intergenic not near genes chr3L 10308854 intergenic not near genes chr3L_7_10305001 chr3L_10305001 RAL-57 1245 chr3L 10310324 10310338 chr3L 10310446 10310460 6 122 6.5 1.0 3.8 1.2 136 chr3L 10310324 intergenic not near genes chr3L 10310392 intergenic not near genes chr3L 10310460 intergenic not near genes chr3L_6_10310001 chr3L_10310001 RAL-57 1246 chr3L 10314105 10314144 chr3L 10314216 10314253 5 110 2.0 2.0 2.0 1.7 148 chr3L 10314105 intergenic not near genes chr3L 10314179 intergenic not near genes chr3L 10314253 intergenic not near genes chr3L_5_10310001 chr3L_10310001 RAL-57 1247 chr3L 10397291 10397315 chr3L 10397395 10397419 4 104 2.0 2.0 2.0 1.3 128 chr3L 10397291 intergenic not near genes chr3L 10397355 intergenic not near genes chr3L 10397419 intergenic not near genes chr3L_4_10395001 chr3L_10395001 RAL-57 1248 chr3L 10414953 10414974 chr3L 10417347 10417369 Doc 5 2396 0.0 2.5 1.2 2.3 2416 chr3L 10414953 intergenic CG12362 + chr3L 10416161 intergenic not near genes chr3L 10417369 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-57 1249 chr3L 10534457 10534491 chr3L 10534560 10534594 6 103 1.0 1.0 1.0 3.0 137 chr3L 10534457 intron A2bp1 + chr3L 10534526 intron A2bp1 + chr3L 10534594 intron A2bp1 + chr3L_6_10530001 chr3L_10530001 RAL-57 1250 chr3L 10621823 10621880 chr3L 10621935 10621991 11 111 2.5 4.0 3.2 2.6 168 chr3L 10621823 intergenic not near genes chr3L 10621907 intergenic not near genes chr3L 10621991 intergenic not near genes chr3L_11_10620001 chr3L_10620001 RAL-57 1251 chr3L 10643883 10643887 chr3L 10643948 10643972 4 89 4.0 11.0 7.5 0.5 89 chr3L 10643883 intron,exon CG32066 -,CG14153 + chr3L 10643928 intron,exon CG32066 -,CG14153 + chr3L 10643972 intron,exon CG32066 -,CG14153 + chr3L_4_10640001 chr3L_10640001 RAL-57 1252 chr3L 10658072 10658194 chr3L 10658174 10658345 9 135 0.0 0.0 0.0 9.0 273 chr3L 10658072 intron CG32066 - chr3L 10658208 intron CG32066 - chr3L 10658345 intron CG32066 - chr3L_9_10655001 chr3L_10655001 RAL-57 1253 chr3L 10769001 10769023 chr3L 10769120 10769143 6 119 8.5 5.0 6.8 0.8 142 chr3L 10769001 intergenic not near genes chr3L 10769072 intergenic not near genes chr3L 10769143 intergenic not near genes chr3L_6_10765001 chr3L_10765001 RAL-57 1254 chr3L 10769026 10769049 chr3L 10769119 10769169 7 110 5.5 5.0 5.2 1.1 143 chr3L 10769026 intergenic not near genes chr3L 10769098 intergenic not near genes chr3L 10769169 intergenic not near genes chr3L_7_10765001 chr3L_10765001 RAL-57 1255 chr3L 10868777 10868815 chr3L 10868884 10868922 9 107 0.0 6.5 3.2 2.1 145 chr3L 10868777 intron tna + chr3L 10868850 intron tna + chr3L 10868922 intron tna + chr3L_9_10865001 chr3L_10865001 RAL-57 1256 chr3L 10956429 10956445 chr3L 10956572 10956587 4 142 3.0 3.5 3.2 1.0 158 chr3L 10956429 intergenic not near genes chr3L 10956508 intergenic not near genes chr3L 10956587 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-57 1257 chr3L 10958185 10958238 chr3L 10958291 10958340 4 105 1.5 0.0 0.8 2.2 155 chr3L 10958185 intergenic not near genes chr3L 10958262 intergenic not near genes chr3L 10958340 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-57 1258 chr3L 11029409 11029445 chr3L 11029545 11029581 16 135 5.0 8.0 6.5 2.1 172 chr3L 11029409 3` UTR CG32081 + chr3L 11029495 intergenic CG32081 + chr3L 11029581 intergenic CG32081 + chr3L_16_11025001 chr3L_11025001 RAL-57 1259 chr3L 11042096 11042118 chr3L 11042260 11042282 11 164 11.0 0.0 5.5 1.7 186 chr3L 11042096 intron CG43693 - chr3L 11042189 intron CG43693 - chr3L 11042282 intron CG43693 - chr3L_11_11040001 chr3L_11040001 RAL-57 1260 chr3L 11087082 11087089 chr3L 11088849 11088903 S-element 8 1807 4.5 4.0 4.2 1.5 1821 chr3L 11087082 intron JIL-1 - chr3L 11087992 intron JIL-1 - chr3L 11088903 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 RAL-57 1261 chr3L 11105277 11105321 chr3L 11107012 11107056 X-element 20 1735 8.5 13.0 10.8 1.7 1779 chr3L 11105277 intergenic not near genes chr3L 11106166 intergenic not near genes chr3L 11107056 exon CG32073 - chr3L_20_11105001 chr3L_11105001 RAL-57 1262 chr3L 11123746 11123752 chr3L 11123848 11123857 4 104 14.0 4.5 9.2 0.4 111 chr3L 11123746 intron CG42575 + chr3L 11123802 intron CG42575 + chr3L 11123857 intron CG42575 + chr3L_4_11120001 chr3L_11120001 RAL-57 1263 chr3L 11123753 11123784 chr3L 11123846 11123888 15 102 6.0 4.5 5.2 2.4 135 chr3L 11123753 intron CG42575 + chr3L 11123820 intron CG42575 + chr3L 11123888 intron CG42575 + chr3L_15_11120001 chr3L_11120001 RAL-57 1264 chr3L 11135509 11135527 chr3L 11135761 11135782 4 254 1.0 0.0 0.5 2.7 273 chr3L 11135509 intergenic CG14143 + chr3L 11135646 intergenic CG14143 +,CG32082 + chr3L 11135782 intergenic CG32082 +,CG14143 + chr3L_4_11135001 chr3L_11135001 RAL-57 1265 chr3L 11217487 11217532 chr3L 11217595 11217639 15 107 8.5 3.0 5.8 2.2 152 chr3L 11217487 intron CG42671 + chr3L 11217563 intron CG42671 + chr3L 11217639 intron CG42671 + chr3L_15_11215001 chr3L_11215001 RAL-57 1266 chr3L 11277429 11277481 chr3L 11278452 11278498 Rt1a 30 1017 5.0 9.5 7.2 3.7 1069 chr3L 11277429 intergenic not near genes chr3L 11277964 intergenic not near genes chr3L 11278498 intergenic not near genes chr3L_30_11275001 chr3L_11275001 RAL-57 1267 chr3L 11284931 11284947 chr3L 11285024 11285024 9 95 16.0 14.0 15.0 0.6 93 chr3L 11284931 5` UTR CR45404 + chr3L 11284978 5` UTR CR45404 + chr3L 11285024 5` UTR CR45404 + chr3L_9_11280001 chr3L_11280001 RAL-57 1268 chr3L 11366657 11366711 chr3L 11366750 11366789 40 87 14.5 24.5 19.5 2.0 132 chr3L 11366657 intergenic not near genes chr3L 11366723 intergenic not near genes chr3L 11366789 intergenic not near genes chr3L_40_11365001 chr3L_11365001 RAL-57 1269 chr3L 11374121 11374162 chr3L 11374228 11374269 8 107 1.0 2.5 1.8 2.9 148 chr3L 11374121 intergenic not near genes chr3L 11374195 intergenic not near genes chr3L 11374269 intergenic not near genes chr3L_8_11370001 chr3L_11370001 RAL-57 1270 chr3L 11397558 11397596 chr3L 11397671 11397676 6 106 4.0 4.0 4.0 1.2 118 chr3L 11397558 exon CG44362 + chr3L 11397617 exon CG44362 + chr3L 11397676 exon CG44362 + chr3L_6_11395001 chr3L_11395001 RAL-57 1271 chr3L 11435544 11435587 chr3L 11435738 11435781 5 194 2.5 4.5 3.5 1.1 237 chr3L 11435544 intergenic CG6149 -,CR44548 + chr3L 11435662 5` UTR CR44548 + chr3L 11435781 5` UTR CR44548 + chr3L_5_11435001 chr3L_11435001 RAL-57 1272 chr3L 11474623 11474653 chr3L 11474737 11474767 6 114 2.0 3.0 2.5 1.7 144 chr3L 11474623 intergenic Vha16-2 + chr3L 11474695 intergenic Vha16-2 + chr3L 11474767 intergenic Vha16-2 + chr3L_6_11470001 chr3L_11470001 RAL-57 1273 chr3L 11483770 11483789 chr3L 11483872 11483891 4 102 2.0 0.0 1.0 2.0 121 chr3L 11483770 intergenic not near genes chr3L 11483830 intergenic not near genes chr3L 11483891 intergenic not near genes chr3L_4_11480001 chr3L_11480001 RAL-57 1274 chr3L 11484664 11484684 chr3L 11484765 11484786 9 102 0.0 1.0 0.5 6.0 122 chr3L 11484664 intergenic not near genes chr3L 11484725 intergenic not near genes chr3L 11484786 intergenic not near genes chr3L_9_11480001 chr3L_11480001 RAL-57 1275 chr3L 11493138 11493185 chr3L 11493258 11493305 12 120 2.5 5.5 4.0 2.4 167 chr3L 11493138 intron chrb + chr3L 11493222 intron chrb + chr3L 11493305 intron chrb + chr3L_12_11490001 chr3L_11490001 RAL-57 1276 chr3L 11551982 11552026 chr3L 11552084 11552128 6 102 2.5 2.5 2.5 1.7 146 chr3L 11551982 intron Mob2 - chr3L 11552055 intron Mob2 - chr3L 11552128 intron Mob2 - chr3L_6_11550001 chr3L_11550001 RAL-57 1277 chr3L 11553703 11553722 chr3L 11553830 11553848 8 127 6.0 1.5 3.8 1.7 145 chr3L 11553703 intron Mob2 - chr3L 11553776 intron Mob2 - chr3L 11553848 intron Mob2 - chr3L_8_11550001 chr3L_11550001 RAL-57 1278 chr3L 11564793 11564796 chr3L 11572408 11572431 412 6 7636 12.0 8.0 10.0 0.5 7638 chr3L 11564793 exon CG33267 + chr3L 11568612 intron CG33267 + chr3L 11572431 exon CG33267 + chr3L_6_11565001 chr3L_11565001 RAL-57 1279 chr3L 11579531 11579567 chr3L 11579662 11579698 8 130 3.5 0.0 1.8 2.9 167 chr3L 11579531 intergenic CG43390 - chr3L 11579614 intergenic CG43390 - chr3L 11579698 intergenic CG43390 - chr3L_8_11575001 chr3L_11575001 RAL-57 1280 chr3L 11587894 11587952 chr3L 11587995 11588053 26 101 9.0 3.0 6.0 3.7 159 chr3L 11587894 intergenic rt - chr3L 11587974 intergenic rt - chr3L 11588053 intergenic rt - chr3L_26_11585001 chr3L_11585001 RAL-57 1281 chr3L 11588708 11588759 chr3L 11588887 11588940 35 180 5.0 11.0 8.0 3.9 232 chr3L 11588708 intergenic not near genes chr3L 11588824 intergenic not near genes chr3L 11588940 intergenic not near genes chr3L_35_11585001 chr3L_11585001 RAL-57 1282 chr3L 11590247 11590273 chr3L 11590362 11590388 6 115 1.0 5.5 3.2 1.4 141 chr3L 11590247 intergenic CG7377 + chr3L 11590318 intergenic CG7377 + chr3L 11590388 intergenic CG7377 +,CG33268 - chr3L_6_11590001 chr3L_11590001 RAL-57 1283 chr3L 11633591 11633616 chr3L 11633696 11633721 5 105 4.0 2.0 3.0 1.2 130 chr3L 11633591 intron CG32091 + chr3L 11633656 intron CG32091 + chr3L 11633721 intron CG32091 + chr3L_5_11630001 chr3L_11630001 RAL-57 1284 chr3L 11633856 11633900 chr3L 11634214 11634258 10 358 0.5 1.0 0.8 5.6 402 chr3L 11633856 intron CG32091 + chr3L 11634057 intron CG32091 + chr3L 11634258 intron CG32091 + chr3L_10_11630001 chr3L_11630001 RAL-57 1285 chr3L 11651660 11651700 chr3L 11651784 11651844 29 137 4.0 8.0 6.0 4.1 184 chr3L 11651660 intron CG32085 - chr3L 11651752 intron CG32085 - chr3L 11651844 intron CG32085 - chr3L_29_11650001 chr3L_11650001 RAL-57 1286 chr3L 11678073 11678120 chr3L 11678185 11678234 17 113 5.5 5.5 5.5 2.6 161 chr3L 11678073 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678234 intron CG32085 - chr3L_17_11675001 chr3L_11675001 RAL-57 1287 chr3L 11723066 11723107 chr3L 11727885 11727927 Doc 21 4820 9.5 6.5 8.0 2.3 4861 chr3L 11723066 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727927 3` UTR Bmcp + chr3L_21_11725001 chr3L_11725001 RAL-57 1288 chr3L 11739848 11739898 chr3L 11739965 11740015 11 118 40.5 39.5 40.0 0.3 167 chr3L 11739848 intron CG6024 - chr3L 11739932 intron CG6024 - chr3L 11740015 intron CG6024 - chr3L_11_11735001 chr3L_11735001 RAL-57 1289 chr3L 11740125 11740136 chr3L 11740243 11740258 6 119 13.0 14.5 13.8 0.4 133 chr3L 11740125 intron CG6024 - chr3L 11740192 intron CG6024 - chr3L 11740258 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-57 1290 chr3L 11740140 11740155 chr3L 11740241 11740278 10 109 9.0 13.5 11.2 0.8 138 chr3L 11740140 intron CG6024 - chr3L 11740209 intron CG6024 - chr3L 11740278 intron CG6024 - chr3L_10_11740001 chr3L_11740001 RAL-57 1291 chr3L 11757906 11757932 chr3L 11758028 11758054 4 121 7.5 0.0 3.8 0.8 148 chr3L 11757906 intron CG6024 - chr3L 11757980 intron CG6024 - chr3L 11758054 intron CG6024 - chr3L_4_11755001 chr3L_11755001 RAL-57 1292 chr3L 7749470 7749471 chr3L 11777678 11777678 25 4028207 13.0 40.5 26.8 0.9 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_25_9760001 chr3L_9760001 RAL-57 1293 chr3L 9313026 9313027 chr3L 11777678 11777678 7 2464652 8.0 40.5 24.2 0.3 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_10545001 chr3L_10545001 RAL-57 1294 chr3L 11777678 11777678 chr3L 12163305 12163305 21 385627 40.0 20.0 30.0 0.7 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_21_11970001 chr3L_11970001 RAL-57 1295 chr3L 11788579 11788633 chr3L 11788680 11788709 15 98 9.5 5.0 7.2 1.8 130 chr3L 11788579 intron Pi3K68D - chr3L 11788644 intron Pi3K68D - chr3L 11788709 intron Pi3K68D - chr3L_15_11785001 chr3L_11785001 RAL-57 1296 chr3L 11796574 11796596 chr3L 11796666 11796707 9 101 10.5 0.0 5.2 1.5 133 chr3L 11796574 exon Klp68D + chr3L 11796640 intron Klp68D + chr3L 11796707 intron Klp68D + chr3L_9_11795001 chr3L_11795001 RAL-57 1297 chr3L 11810535 11810545 chr3L 11810638 11810648 6 102 0.5 5.0 2.8 1.6 113 chr3L 11810535 intron CG42255 - chr3L 11810592 intron CG42255 - chr3L 11810648 exon CG42255 - chr3L_6_11810001 chr3L_11810001 RAL-57 1298 chr3L 11849313 11849355 chr3L 11849438 11849480 13 123 3.5 5.0 4.2 2.5 167 chr3L 11849313 intergenic not near genes chr3L 11849396 intergenic not near genes chr3L 11849480 intergenic not near genes chr3L_13_11845001 chr3L_11845001 RAL-57 1299 chr3L 11887245 11887289 chr3L 11887367 11887416 6 123 1.5 0.0 0.8 3.3 171 chr3L 11887245 intron CG44837 - chr3L 11887330 intron,3` UTR CG44837 -,CG5897 - chr3L 11887416 intron,3` UTR CG44837 -,CG5897 - chr3L_6_11885001 chr3L_11885001 RAL-57 1300 chr3L 11943481 11943517 chr3L 11943601 11943643 4 124 2.0 0.5 1.2 1.8 162 chr3L 11943481 3` UTR Rpt4R + chr3L 11943562 intergenic Rpt4R +,CG5883 - chr3L 11943643 3` UTR CG5883 - chr3L_4_11940001 chr3L_11940001 RAL-57 1301 chr3L 12066554 12066603 chr3L 12066733 12066782 15 178 0.0 6.0 3.0 3.8 228 chr3L 12066554 intergenic not near genes chr3L 12066668 intergenic not near genes chr3L 12066782 intergenic not near genes chr3L_15_12065001 chr3L_12065001 RAL-57 1302 chr3L 12067075 12067079 chr3L 12067179 12067183 4 104 0.0 0.0 0.0 4.0 108 chr3L 12067075 intergenic Sema-5c - chr3L 12067129 intergenic Sema-5c - chr3L 12067183 intergenic Sema-5c - chr3L_4_12065001 chr3L_12065001 RAL-57 1303 chr3L 12075401 12075457 chr3L 12075515 12075566 20 112 7.0 0.0 3.5 4.4 165 chr3L 12075401 intron Sema-5c - chr3L 12075484 intron Sema-5c - chr3L 12075566 intron Sema-5c - chr3L_20_12075001 chr3L_12075001 RAL-57 1304 chr3L 12089056 12089100 chr3L 12089161 12089205 4 105 1.5 2.0 1.8 1.4 149 chr3L 12089056 exon CG17154 + chr3L 12089130 3` UTR CG17154 + chr3L 12089205 3` UTR CG17154 + chr3L_4_12085001 chr3L_12085001 RAL-57 1305 chr3L 12119739 12119786 chr3L 12119860 12119908 22 122 7.5 5.5 6.5 2.9 169 chr3L 12119739 3` UTR ssp + chr3L 12119824 intergenic ssp +,CG11560 + chr3L 12119908 intergenic CG11560 +,ssp + chr3L_22_12115001 chr3L_12115001 RAL-57 1306 chr3L 11777678 11777678 chr3L 12163305 12163305 5 385627 40.0 20.0 30.0 0.2 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_5_11970001 chr3L_11970001 RAL-57 1307 chr3L 12283524 12283535 chr3L 12283629 12283640 5 105 2.5 4.0 3.2 1.2 116 chr3L 12283524 intergenic not near genes chr3L 12283582 intergenic not near genes chr3L 12283640 intergenic not near genes chr3L_5_12280001 chr3L_12280001 RAL-57 1308 chr3L 12300829 12300876 chr3L 12300986 12301040 16 163 4.5 11.0 7.8 1.8 211 chr3L 12300829 intergenic CR44550 + chr3L 12300934 intergenic CR44550 + chr3L 12301040 5` UTR CR44550 + chr3L_16_12300001 chr3L_12300001 RAL-57 1309 chr3L 12312497 12312506 chr3L 12312575 12312609 5 94 3.5 7.0 5.2 0.8 112 chr3L 12312497 intergenic not near genes chr3L 12312553 intergenic not near genes chr3L 12312609 intergenic not near genes chr3L_5_12310001 chr3L_12310001 RAL-57 1310 chr3L 12369511 12369567 chr3L 12369626 12369680 12 115 1.5 3.0 2.2 3.8 169 chr3L 12369511 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369680 intron Ncc69 - chr3L_12_12365001 chr3L_12365001 RAL-57 1311 chr3L 12429676 12429699 chr3L 12429779 12429804 12 102 11.0 21.0 16.0 0.7 128 chr3L 12429676 intron toe - chr3L 12429740 intron toe - chr3L 12429804 intron toe - chr3L_12_12425001 chr3L_12425001 RAL-57 1312 chr3L 12446245 12446299 chr3L 12446348 12446399 9 97 2.5 4.0 3.2 2.1 154 chr3L 12446245 intergenic not near genes chr3L 12446322 intergenic not near genes chr3L 12446399 intergenic not near genes chr3L_9_12445001 chr3L_12445001 RAL-57 1313 chr3L 12511797 12511836 chr3L 12511917 12511957 15 121 7.5 4.0 5.8 2.2 160 chr3L 12511797 exon sti - chr3L 12511877 intron sti - chr3L 12511957 intron sti - chr3L_15_12510001 chr3L_12510001 RAL-57 1314 chr3L 12555621 12555648 chr3L 12555738 12555755 4 115 1.5 3.5 2.5 1.1 134 chr3L 12555621 intron sowah - chr3L 12555688 intron sowah - chr3L 12555755 intron sowah - chr3L_4_12555001 chr3L_12555001 RAL-57 1315 chr3L 12565399 12565407 chr3L 12565504 12565512 4 104 6.0 3.0 4.5 0.7 113 chr3L 12565399 intron sowah - chr3L 12565456 intron sowah - chr3L 12565512 intron sowah - chr3L_4_12565001 chr3L_12565001 RAL-57 1316 chr3L 12565413 12565445 chr3L 12565502 12565550 6 102 2.0 2.5 2.2 1.9 137 chr3L 12565413 intron sowah - chr3L 12565482 intron sowah - chr3L 12565550 intron sowah - chr3L_6_12565001 chr3L_12565001 RAL-57 1317 chr3L 12578045 12578081 chr3L 12578158 12578194 12 113 1.5 0.0 0.8 6.7 149 chr3L 12578045 intergenic not near genes chr3L 12578120 intergenic not near genes chr3L 12578194 intergenic not near genes chr3L_12_12575001 chr3L_12575001 RAL-57 1318 chr3L 12587340 12587365 chr3L 12587448 12587473 8 108 4.0 0.5 2.2 2.5 133 chr3L 12587340 intron ara + chr3L 12587406 intron ara + chr3L 12587473 intron ara + chr3L_8_12585001 chr3L_12585001 RAL-57 1319 chr3L 12610969 12611025 chr3L 12611240 12611296 22 271 3.0 1.5 2.2 6.9 327 chr3L 12610969 intron caup + chr3L 12611132 intron caup + chr3L 12611296 intron caup + chr3L_22_12610001 chr3L_12610001 RAL-57 1320 chr3L 12626131 12626166 chr3L 12626265 12626288 10 133 6.5 0.5 3.5 2.2 157 chr3L 12626131 intergenic not near genes chr3L 12626210 intergenic not near genes chr3L 12626288 intergenic not near genes chr3L_10_12625001 chr3L_12625001 RAL-57 1321 chr3L 12647933 12647954 chr3L 12648032 12648055 5 100 4.0 0.5 2.2 1.6 122 chr3L 12647933 5` UTR CR32111 + chr3L 12647994 5` UTR CR32111 + chr3L 12648055 5` UTR CR32111 + chr3L_5_12645001 chr3L_12645001 RAL-57 1322 chr3L 12681689 12681716 chr3L 12682067 12682093 5 377 2.5 5.5 4.0 1.0 404 chr3L 12681689 intergenic not near genes chr3L 12681891 intergenic not near genes chr3L 12682093 intergenic not near genes chr3L_5_12680001 chr3L_12680001 RAL-57 1323 chr3L 12743254 12743300 chr3L 12743356 12743401 5 101 0.0 0.0 0.0 5.0 147 chr3L 12743254 intron CG32112 + chr3L 12743328 intron CG32112 + chr3L 12743401 intron CG32112 + chr3L_5_12740001 chr3L_12740001 RAL-57 1324 chr3L 12801956 12802005 chr3L 12802054 12802091 7 98 1.0 2.5 1.8 2.5 135 chr3L 12801956 intron Atg1 - chr3L 12802024 intron Atg1 - chr3L 12802091 intron Atg1 - chr3L_7_12800001 chr3L_12800001 RAL-57 1325 chr3L 12832810 12832819 chr3L 12833268 12833277 4 458 7.0 1.5 4.2 0.8 467 chr3L 12832810 intron CG10960 - chr3L 12833044 intron CG10960 - chr3L 12833277 intron CG10960 - chr3L_4_12830001 chr3L_12830001 RAL-57 1326 chr3L 12857970 12858004 chr3L 12858090 12858124 12 120 1.0 3.0 2.0 4.0 154 chr3L 12857970 3` UTR CG32107 - chr3L 12858047 3` UTR CG32107 - chr3L 12858124 3` UTR CG32107 - chr3L_12_12855001 chr3L_12855001 RAL-57 1327 chr3L 12894786 12894803 chr3L 12894888 12894904 8 102 8.5 6.0 7.2 1.0 118 chr3L 12894786 intergenic CG14118 + chr3L 12894845 intergenic CG14118 + chr3L 12894904 intergenic CG14118 + chr3L_8_12890001 chr3L_12890001 RAL-57 1328 chr3L 12957764 12957812 chr3L 12962271 12962319 copia 7 4507 1.5 2.0 1.8 2.5 4555 chr3L 12957764 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962319 intergenic not near genes chr3L_7_12960001 chr3L_12960001 RAL-57 1329 chr3L 12967125 12967166 chr3L 12967218 12967261 6 102 0.5 1.0 0.8 3.3 136 chr3L 12967125 exon Or69a - chr3L 12967193 exon Or69a - chr3L 12967261 exon Or69a - chr3L_6_12965001 chr3L_12965001 RAL-57 1330 chr3L 12980499 12980549 chr3L 12980606 12980667 22 113 3.5 0.0 1.8 7.9 168 chr3L 12980499 intergenic not near genes chr3L 12980583 intergenic not near genes chr3L 12980667 intergenic not near genes chr3L_22_12980001 chr3L_12980001 RAL-57 1331 chr3L 13008777 13008827 chr3L 13008958 13009010 4 183 1.5 2.5 2.0 1.3 233 chr3L 13008777 exon CG14117 + chr3L 13008894 intron CG14117 + chr3L 13009010 exon CG14117 + chr3L_4_13005001 chr3L_13005001 RAL-57 1332 chr3L 13017895 13017913 chr3L 13018002 13018020 8 107 1.0 2.0 1.5 3.2 125 chr3L 13017895 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017958 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018020 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_8_13015001 chr3L_13015001 RAL-57 1333 chr3L 13134149 13134207 chr3L 13134294 13134304 24 141 10.0 5.5 7.8 2.7 155 chr3L 13134149 intergenic not near genes chr3L 13134226 intergenic not near genes chr3L 13134304 intergenic not near genes chr3L_24_13130001 chr3L_13130001 RAL-57 1334 chr3L 13194046 13194057 chr3L 13194149 13194161 4 104 6.5 1.5 4.0 0.8 115 chr3L 13194046 intergenic not near genes chr3L 13194104 intergenic not near genes chr3L 13194161 intergenic not near genes chr3L_4_13190001 chr3L_13190001 RAL-57 1335 chr3L 13194062 13194095 chr3L 13194148 13194199 4 94 2.5 1.5 2.0 1.3 137 chr3L 13194062 intergenic not near genes chr3L 13194130 intergenic not near genes chr3L 13194199 intergenic not near genes chr3L_4_13190001 chr3L_13190001 RAL-57 1336 chr3L 13206226 13206254 chr3L 13206318 13206350 6 100 2.5 3.5 3.0 1.5 124 chr3L 13206226 intergenic not near genes chr3L 13206288 intergenic not near genes chr3L 13206350 intergenic not near genes chr3L_6_13205001 chr3L_13205001 RAL-57 1337 chr3L 13213701 13213760 chr3L 13213803 13213839 22 92 6.0 3.5 4.8 3.8 138 chr3L 13213701 intergenic not near genes chr3L 13213770 intergenic not near genes chr3L 13213839 intergenic not near genes chr3L_22_13210001 chr3L_13210001 RAL-57 1338 chr3L 13267261 13267318 chr3L 13267398 13267438 11 135 4.5 0.0 2.2 3.4 177 chr3L 13267261 intron caps + chr3L 13267350 intron caps + chr3L 13267438 intron caps + chr3L_11_13265001 chr3L_13265001 RAL-57 1339 chr3L 13400516 13400544 chr3L 13400614 13400645 20 100 4.0 14.5 9.2 2.0 129 chr3L 13400516 intron sens - chr3L 13400580 intron sens - chr3L 13400645 intron sens - chr3L_20_13400001 chr3L_13400001 RAL-57 1340 chr3L 13477002 13477037 chr3L 13477104 13477139 11 102 0.0 6.0 3.0 2.8 137 chr3L 13477002 intergenic not near genes chr3L 13477070 intergenic stv + chr3L 13477139 intergenic stv + chr3L_11_13475001 chr3L_13475001 RAL-57 1341 chr3L 13525135 13525187 chr3L 13532956 13532989 roo 23 7819 4.0 4.5 4.2 4.4 7854 chr3L 13525135 intergenic not near genes chr3L 13529062 intergenic not near genes chr3L 13532989 intergenic not near genes chr3L_23_13525001 chr3L_13525001 RAL-57 1342 chr3L 13574605 13574619 chr3L 13580141 13580153 Rt1c 5 5536 5.0 6.0 5.5 0.8 5548 chr3L 13574605 intron bru-3 - chr3L 13577379 intron bru-3 - chr3L 13580153 intron bru-3 - chr3L_5_13575001 chr3L_13575001 RAL-57 1343 chr3L 13634812 13634855 chr3L 13634920 13634962 5 107 3.0 3.5 3.2 1.2 150 chr3L 13634812 intron bru-3 - chr3L 13634887 intron bru-3 - chr3L 13634962 intron bru-3 - chr3L_5_13630001 chr3L_13630001 RAL-57 1344 chr3L 13641438 13641477 chr3L 13641564 13641604 12 119 5.5 4.0 4.8 2.1 166 chr3L 13641438 intron bru-3 - chr3L 13641521 intron bru-3 - chr3L 13641604 intron bru-3 - chr3L_12_13640001 chr3L_13640001 RAL-57 1345 chr3L 13683935 13683958 chr3L 13685810 13685861 10 1883 17.0 26.5 21.8 0.4 1926 chr3L 13683935 intron bru-3 - chr3L 13684898 intron bru-3 - chr3L 13685861 intron bru-3 - chr3L_10_13680001 chr3L_13680001 RAL-57 1346 chr3L 13804531 13804571 chr3L 13822842 13822861 roo 6 18307 5.0 3.0 4.0 1.2 18330 chr3L 13804531 intergenic not near genes chr3L 13813696 intergenic not near genes chr3L 13822861 intergenic not near genes chr3L_6_13810001 chr3L_13810001 RAL-57 1347 chr3L 13862385 13862439 chr3L 13862771 13862828 25 385 4.0 7.0 5.5 3.8 443 chr3L 13862385 intron CG8745 - chr3L 13862606 intron CG8745 - chr3L 13862828 intron CG8745 - chr3L_25_13860001 chr3L_13860001 RAL-57 1348 chr3L 13884363 13884386 chr3L 13884477 13884502 11 115 15.0 4.5 9.8 1.0 139 chr3L 13884363 intron dysc - chr3L 13884432 intron dysc - chr3L 13884502 intron dysc - chr3L_11_13880001 chr3L_13880001 RAL-57 1349 chr3L 13898197 13898222 chr3L 13898306 13898331 4 109 5.5 2.0 3.8 0.8 134 chr3L 13898197 intron dysc - chr3L 13898264 intron dysc - chr3L 13898331 intron dysc - chr3L_4_13895001 chr3L_13895001 RAL-57 1350 chr3L 13907569 13907618 chr3L 13907681 13907730 5 112 3.0 2.5 2.8 1.3 161 chr3L 13907569 3` UTR Rgl - chr3L 13907650 3` UTR Rgl - chr3L 13907730 3` UTR Rgl - chr3L_5_13905001 chr3L_13905001 RAL-57 1351 chr3L 13925771 13925793 chr3L 13925872 13925894 6 101 0.0 3.0 1.5 2.4 123 chr3L 13925771 intergenic CG8833 -,Rgl - chr3L 13925832 intergenic CG8833 -,Rgl - chr3L 13925894 3` UTR CG8833 - chr3L_6_13925001 chr3L_13925001 RAL-57 1352 chr3L 13931361 13931367 chr3L 13931491 13931497 4 130 1.0 11.0 6.0 0.6 136 chr3L 13931361 intron Gl + chr3L 13931429 intron Gl + chr3L 13931497 intron Gl + chr3L_4_13930001 chr3L_13930001 RAL-57 1353 chr3L 14087100 14087121 chr3L 14276883 14276890 4 189780 8.0 17.0 12.5 0.3 189790 chr3L 14087100 intergenic not near genes chr3L 14181995 intergenic not near genes chr3L 14276890 intron fz + chr3L_4_14180001 chr3L_14180001 RAL-57 1354 chr3L 14131964 14132013 chr3L 14132084 14132134 9 121 3.0 2.0 2.5 2.6 170 chr3L 14131964 intergenic not near genes chr3L 14132049 intergenic not near genes chr3L 14132134 intergenic not near genes chr3L_9_14130001 chr3L_14130001 RAL-57 1355 chr3L 14239978 14239987 chr3L 14240100 14240100 4 119 2.0 4.0 3.0 1.0 122 chr3L 14239978 intergenic not near genes chr3L 14240039 intergenic not near genes chr3L 14240100 intergenic not near genes chr3L_4_14240001 chr3L_14240001 RAL-57 1356 chr3L 14245547 14245592 chr3L 14245665 14245711 1360 6 112 1.0 1.5 1.2 2.7 164 chr3L 14245547 3` UTR CR44561 - chr3L 14245629 3` UTR CR44561 - chr3L 14245711 intergenic CR44561 -,CR44560 + chr3L_6_14245001 chr3L_14245001 RAL-57 1357 chr3L 14312017 14312033 chr3L 14316856 14316872 X-element 4 4838 9.5 12.5 11.0 0.3 4855 chr3L 14312017 exon fz + chr3L 14314444 intron fz + chr3L 14316872 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-57 1358 chr3L 14312035 14312056 chr3L 14316833 14316859 X-element 9 4816 2.5 8.5 5.5 1.4 4824 chr3L 14312035 exon fz + chr3L 14314447 intron fz + chr3L 14316859 intron fz + chr3L_9_14310001 chr3L_14310001 RAL-57 1359 chr3L 14326957 14326991 chr3L 14327118 14327152 8 161 3.5 5.0 4.2 1.5 195 chr3L 14326957 intron fz + chr3L 14327054 intron fz + chr3L 14327152 intron fz + chr3L_8_14325001 chr3L_14325001 RAL-57 1360 chr3L 14356504 14356529 chr3L 14356608 14356634 5 104 3.5 1.5 2.5 1.4 130 chr3L 14356504 intron fz + chr3L 14356569 intron fz + chr3L 14356634 intron fz + chr3L_5_14355001 chr3L_14355001 RAL-57 1361 chr3L 14394855 14394885 chr3L 14394978 14395006 4 122 3.5 1.5 2.5 1.1 151 chr3L 14394855 intergenic not near genes chr3L 14394930 intergenic not near genes chr3L 14395006 intergenic not near genes chr3L_4_14390001 chr3L_14390001 RAL-57 1362 chr3L 14411848 14411889 chr3L 14411952 14411993 13 103 3.0 5.0 4.0 2.6 145 chr3L 14411848 intron CG3919 + chr3L 14411920 intron CG3919 + chr3L 14411993 intron CG3919 + chr3L_13_14410001 chr3L_14410001 RAL-57 1363 chr3L 14441590 14441618 chr3L 14441763 14441790 4 173 0.5 1.0 0.8 2.2 200 chr3L 14441590 intron bbg - chr3L 14441690 intron bbg - chr3L 14441790 intron bbg - chr3L_4_14440001 chr3L_14440001 RAL-57 1364 chr3L 14468430 14468472 chr3L 14473661 14473702 copia 6 5231 0.5 2.0 1.2 2.7 5272 chr3L 14468430 intron bbg - chr3L 14471066 intron bbg - chr3L 14473702 intron bbg - chr3L_6_14470001 chr3L_14470001 RAL-57 1365 chr3L 14522076 14522130 chr3L 14522200 14522254 8 124 1.0 1.5 1.2 3.6 178 chr3L 14522076 intron bbg - chr3L 14522165 intron bbg - chr3L 14522254 intron bbg - chr3L_8_14520001 chr3L_14520001 RAL-57 1366 chr3L 14535298 14535349 chr3L 14535521 14535572 10 223 2.0 0.0 1.0 5.0 274 chr3L 14535298 intron bbg - chr3L 14535435 intron bbg - chr3L 14535572 intron bbg - chr3L_10_14535001 chr3L_14535001 RAL-57 1367 chr3L 14546804 14546816 chr3L 14546928 14546942 10 126 0.0 13.0 6.5 1.3 138 chr3L 14546804 intron CG9238 - chr3L 14546873 intron CG9238 - chr3L 14546942 intron CG9238 - chr3L_10_14545001 chr3L_14545001 RAL-57 1368 chr3L 14721170 14721202 chr3L 14723037 14723049 Rt1c 4 1855 2.5 2.0 2.2 1.2 1879 chr3L 14721170 intron ome + chr3L 14722110 intron ome + chr3L 14723049 intron ome + chr3L_4_14720001 chr3L_14720001 RAL-57 1369 chr3L 14731197 14731229 chr3L 14731412 14731444 5 215 4.0 2.0 3.0 1.2 247 chr3L 14731197 intron ome + chr3L 14731320 intron ome + chr3L 14731444 intron ome + chr3L_5_14730001 chr3L_14730001 RAL-57 1370 chr3L 14784941 14784995 chr3L 14785051 14785105 11 110 1.0 5.5 3.2 2.6 164 chr3L 14784941 intron bmm - chr3L 14785023 intron bmm - chr3L 14785105 intron bmm - chr3L_11_14785001 chr3L_14785001 RAL-57 1371 chr3L 14913880 14913932 chr3L 14913981 14914034 7 101 1.0 1.0 1.0 3.5 154 chr3L 14913880 intron DCX-EMAP + chr3L 14913957 intron DCX-EMAP + chr3L 14914034 intron DCX-EMAP + chr3L_7_14910001 chr3L_14910001 RAL-57 1372 chr3L 14970740 14970763 chr3L 14971075 14971098 F-element 4 335 8.5 4.5 6.5 0.5 358 chr3L 14970740 intergenic Tom + chr3L 14970919 intergenic not near genes chr3L 14971098 intergenic not near genes chr3L_4_14970001 chr3L_14970001 RAL-57 1373 chr3L 15099230 15099268 chr3L 15099708 15099746 13 479 44.5 41.5 43.0 0.3 516 chr3L 15099230 intron,intron CTPsyn +,CR43973 - chr3L 15099488 intron,3` UTR CTPsyn +,CR43973 - chr3L 15099746 intron CTPsyn + chr3L_13_15095001 chr3L_15095001 RAL-57 1374 chr3L 15170774 15170829 chr3L 15170948 15170995 11 166 3.5 0.0 1.8 3.9 221 chr3L 15170774 intergenic not near genes chr3L 15170884 intergenic not near genes chr3L 15170995 intergenic not near genes chr3L_11_15170001 chr3L_15170001 RAL-57 1375 chr3L 15209063 15209097 chr3L 15209174 15209208 5 111 4.0 2.5 3.2 1.2 145 chr3L 15209063 intergenic CG6888 + chr3L 15209136 intergenic not near genes chr3L 15209208 intergenic not near genes chr3L_5_15205001 chr3L_15205001 RAL-57 1376 chr3L 15257409 15257451 chr3L 15257645 15257689 13 237 7.5 3.0 5.2 2.1 280 chr3L 15257409 intergenic not near genes chr3L 15257549 intergenic not near genes chr3L 15257689 intergenic not near genes chr3L_13_15255001 chr3L_15255001 RAL-57 1377 chr3L 15310058 15310071 chr3L 15310150 15310156 10 94 12.0 11.5 11.8 0.8 98 chr3L 15310058 exon CG7255 + chr3L 15310107 exon CG7255 + chr3L 15310156 exon CG7255 + chr3L_10_15310001 chr3L_15310001 RAL-57 1378 chr3L 15310072 15310091 chr3L 15310148 15310161 10 77 7.0 10.5 8.8 1.0 89 chr3L 15310072 exon CG7255 + chr3L 15310116 exon CG7255 + chr3L 15310161 exon CG7255 + chr3L_10_15310001 chr3L_15310001 RAL-57 1379 chr3L 15444636 15444669 chr3L 15444753 15444768 4 113 1.5 1.0 1.2 1.8 132 chr3L 15444636 intergenic not near genes chr3L 15444702 intergenic not near genes chr3L 15444768 intergenic not near genes chr3L_4_15440001 chr3L_15440001 RAL-57 1380 chr3L 15466013 15466134 chr3L 15466120 15466255 5 110 0.0 0.0 0.0 5.0 242 chr3L 15466013 intergenic not near genes chr3L 15466134 intergenic not near genes chr3L 15466255 intergenic not near genes chr3L_5_15465001 chr3L_15465001 RAL-57 1381 chr3L 15474670 15474685 chr3L 15474833 15474849 6 164 2.5 2.0 2.2 1.9 179 chr3L 15474670 intergenic not near genes chr3L 15474760 intergenic not near genes chr3L 15474849 intergenic not near genes chr3L_6_15470001 chr3L_15470001 RAL-57 1382 chr3L 15489038 15489074 chr3L 15489343 15489357 7 301 5.5 3.5 4.5 1.3 319 chr3L 15489038 intergenic not near genes chr3L 15489198 intergenic not near genes chr3L 15489357 intergenic not near genes chr3L_7_15485001 chr3L_15485001 RAL-57 1383 chr3L 15541598 15541642 chr3L 15541714 15541758 6 116 2.5 0.5 1.5 2.4 160 chr3L 15541598 intron CrebA + chr3L 15541678 intron CrebA + chr3L 15541758 intron CrebA + chr3L_6_15540001 chr3L_15540001 RAL-57 1384 chr3L 15541924 15541965 chr3L 15542041 15542084 5 119 1.0 1.0 1.0 2.5 160 chr3L 15541924 intron CrebA + chr3L 15542004 intron CrebA + chr3L 15542084 intron CrebA + chr3L_5_15540001 chr3L_15540001 RAL-57 1385 chr3L 15600175 15600192 chr3L 15600301 15600318 8 126 3.5 4.5 4.0 1.6 143 chr3L 15600175 intron RhoGAP71E + chr3L 15600246 intron RhoGAP71E + chr3L 15600318 intron RhoGAP71E + chr3L_8_15600001 chr3L_15600001 RAL-57 1386 chr3L 15773654 15773681 chr3L 15773851 15773878 4 192 0.5 1.5 1.0 2.0 224 chr3L 15773654 intergenic not near genes chr3L 15773766 intergenic not near genes chr3L 15773878 intergenic not near genes chr3L_4_15770001 chr3L_15770001 RAL-57 1387 chr3L 15832231 15832283 chr3L 15832337 15832388 11 106 1.5 5.5 3.5 2.4 157 chr3L 15832231 intergenic dbo +,CG12713 + chr3L 15832310 intergenic CG12713 +,dbo + chr3L 15832388 intergenic CG12713 +,dbo + chr3L_11_15830001 chr3L_15830001 RAL-57 1388 chr3L 15912541 15912575 chr3L 15912629 15912677 12 101 4.0 2.0 3.0 3.0 136 chr3L 15912541 intron sff - chr3L 15912609 intron sff - chr3L 15912677 intron sff - chr3L_12_15910001 chr3L_15910001 RAL-57 1389 chr3L 15981653 15981687 chr3L 15981764 15981799 12 111 13.0 7.0 10.0 1.1 146 chr3L 15981653 intron,3` UTR brm -,CG17027 + chr3L 15981726 intron,3` UTR brm -,CG17027 + chr3L 15981799 intron,3` UTR brm -,CG17027 + chr3L_12_15980001 chr3L_15980001 RAL-57 1390 chr3L 16162586 16162616 chr3L 16162695 16162725 10 107 3.5 3.0 3.2 2.4 139 chr3L 16162586 intron CG5151 - chr3L 16162656 intron CG5151 - chr3L 16162725 intron CG5151 - chr3L_10_16160001 chr3L_16160001 RAL-57 1391 chr3L 16184077 16184137 chr3L 16188921 16188959 X-element 12 4842 1.5 5.5 3.5 2.7 4882 chr3L 16184077 intergenic not near genes chr3L 16186518 intergenic not near genes chr3L 16188959 intergenic not near genes chr3L_12_16185001 chr3L_16185001 RAL-57 1392 chr3L 16241887 16241924 chr3L 16241996 16242033 12 108 6.5 3.0 4.8 2.1 146 chr3L 16241887 intergenic not near genes chr3L 16241960 intergenic not near genes chr3L 16242033 intergenic not near genes chr3L_12_16240001 chr3L_16240001 RAL-57 1393 chr3L 16357129 16357156 chr3L 16357310 16357340 4 182 3.5 2.0 2.8 1.1 211 chr3L 16357129 intron CG45057 - chr3L 16357234 intron CG45057 - chr3L 16357340 intron CG45057 - chr3L_4_16355001 chr3L_16355001 RAL-57 1394 chr3L 16443824 16443864 chr3L 16446191 16446228 Doc 4 2362 3.5 2.5 3.0 1.0 2404 chr3L 16443824 intron,intron CG33158 +,dsx-c73A - chr3L 16445026 intron,intron CG33158 +,dsx-c73A - chr3L 16446228 intron,intron CG33158 +,dsx-c73A - chr3L_4_16445001 chr3L_16445001 RAL-57 1395 chr3L 16493950 16493965 chr3L 16494492 16494500 jockey 7 540 18.5 8.0 13.2 0.5 550 chr3L 16493950 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494225 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494500 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_7_16490001 chr3L_16490001 RAL-57 1396 chr3L 16493970 16494004 chr3L 16494490 16494546 jockey 18 539 8.5 7.0 7.8 2.0 576 chr3L 16493970 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494258 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494546 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_18_16490001 chr3L_16490001 RAL-57 1397 chr3L 16540028 16540087 chr3L 16540141 16540187 11 111 1.5 1.0 1.2 5.0 159 chr3L 16540028 intron CG43373 - chr3L 16540108 intron CG43373 - chr3L 16540187 intron CG43373 - chr3L_11_16540001 chr3L_16540001 RAL-57 1398 chr3L 16559094 16559140 chr3L 16559316 16559363 17 223 4.5 4.0 4.2 3.3 269 chr3L 16559094 intergenic not near genes chr3L 16559228 intergenic not near genes chr3L 16559363 intergenic not near genes chr3L_17_16555001 chr3L_16555001 RAL-57 1399 chr3L 16616495 16616511 chr3L 16621847 16621851 297 5 5350 17.0 8.0 12.5 0.4 5356 chr3L 16616495 3` UTR Abl - chr3L 16619173 3` UTR Abl - chr3L 16621851 3` UTR Abl - chr3L_5_16615001 chr3L_16615001 RAL-57 1400 chr3L 16616513 16616541 chr3L 16621842 16621894 297 14 5348 8.0 7.0 7.5 1.6 5381 chr3L 16616513 3` UTR Abl - chr3L 16619204 3` UTR Abl - chr3L 16621894 3` UTR Abl - chr3L_14_16615001 chr3L_16615001 RAL-57 1401 chr3L 16652659 16652716 chr3L 16652762 16652819 38 101 10.0 7.5 8.8 3.9 160 chr3L 16652659 intron Baldspot - chr3L 16652739 intron Baldspot - chr3L 16652819 intron Baldspot - chr3L_38_16650001 chr3L_16650001 RAL-57 1402 chr3L 16759009 16759057 chr3L 16759102 16759131 4 86 5.5 2.0 3.8 0.8 122 chr3L 16759009 intergenic not near genes chr3L 16759070 intergenic not near genes chr3L 16759131 intergenic not near genes chr3L_4_16755001 chr3L_16755001 RAL-57 1403 chr3L 16808023 16808041 chr3L 16808124 16808142 5 101 6.0 0.0 3.0 1.2 119 chr3L 16808023 intron nudC + chr3L 16808082 intron nudC + chr3L 16808142 intron nudC + chr3L_5_16805001 chr3L_16805001 RAL-57 1404 chr3L 16817849 16817908 chr3L 16818014 16818052 12 156 1.0 1.0 1.0 6.0 203 chr3L 16817849 intron,intron nudC +,CG13024 - chr3L 16817950 intron,intron nudC +,CG13024 - chr3L 16818052 intron,intron nudC +,CG13024 - chr3L_12_16815001 chr3L_16815001 RAL-57 1405 chr3L 16818726 16818775 chr3L 16818827 16818876 12 101 5.5 7.5 6.5 1.6 150 chr3L 16818726 intron,intron nudC +,CG13024 - chr3L 16818801 intron,intron nudC +,CG13024 - chr3L 16818876 intron,intron nudC +,CG13024 - chr3L_12_16815001 chr3L_16815001 RAL-57 1406 chr3L 16845008 16845043 chr3L 16845146 16845181 11 138 1.5 4.5 3.0 2.8 173 chr3L 16845008 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845094 intergenic CG9669 -,CG9715 + chr3L 16845181 intergenic CG9669 -,CG9715 + chr3L_11_16845001 chr3L_16845001 RAL-57 1407 chr3L 16873335 16873357 chr3L 16873465 16873487 6 130 2.5 4.0 3.2 1.4 152 chr3L 16873335 intron Lmpt + chr3L 16873411 intron Lmpt + chr3L 16873487 intron Lmpt + chr3L_6_16870001 chr3L_16870001 RAL-57 1408 chr3L 16885799 16885836 chr3L 16885909 16885946 14 110 2.5 6.5 4.5 2.5 147 chr3L 16885799 intron Lmpt + chr3L 16885872 intron Lmpt + chr3L 16885946 intron Lmpt + chr3L_14_16885001 chr3L_16885001 RAL-57 1409 chr3L 16941376 16941418 chr3L 16941502 16941544 29 126 15.5 1.0 8.2 3.2 168 chr3L 16941376 intron Cpr73D - chr3L 16941460 intron Cpr73D - chr3L 16941544 intron Cpr73D - chr3L_29_16940001 chr3L_16940001 RAL-57 1410 chr3L 16945720 16945757 chr3L 16954880 16954918 roo 16 9161 2.5 3.0 2.8 4.2 9198 chr3L 16945720 exon Obp73a + chr3L 16950319 intergenic not near genes chr3L 16954918 5` UTR Nc73EF + chr3L_16_16950001 chr3L_16950001 RAL-57 1411 chr3L 16973378 16973390 chr3L 23583088 23583100 4 6609710 3.5 3.0 3.2 1.0 6609722 chr3L 16973378 intron Exn + chr3L 20278239 exon gogo - chr3L 23583100 intron AGO3 + chr3L_4_20275001 chr3L_20275001 RAL-57 1412 chr3L 17027146 17027189 chr3L 17027263 17027306 17 117 3.5 7.5 5.5 2.6 160 chr3L 17027146 intergenic Fit2 +,CG7730 + chr3L 17027226 intergenic Fit2 +,CG7730 + chr3L 17027306 intergenic Fit2 +,CG7730 + chr3L_17_17025001 chr3L_17025001 RAL-57 1413 chr3L 17034908 17034961 chr3L 17035121 17035174 G2 17 213 2.0 5.5 3.8 3.5 266 chr3L 17034908 intergenic not near genes chr3L 17035041 intergenic not near genes chr3L 17035174 intergenic beg + chr3L_17_17035001 chr3L_17035001 RAL-57 1414 chr3L 17047956 17047988 chr3L 17048149 17048181 5 189 7.0 4.0 5.5 0.8 225 chr3L 17047956 intron TpnC73F + chr3L 17048068 3` UTR TpnC73F + chr3L 17048181 3` UTR TpnC73F + chr3L_5_17045001 chr3L_17045001 RAL-57 1415 chr3L 17084986 17085029 chr3L 17094160 17094203 roo 23 9174 8.5 8.0 8.2 2.5 9217 chr3L 17084986 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094203 intron Rbp6 - chr3L_23_17085001 chr3L_17085001 RAL-57 1416 chr3L 17117093 17117130 chr3L 17117203 17117239 5 110 2.0 1.0 1.5 2.0 146 chr3L 17117093 intron Rbp6 - chr3L 17117166 intron Rbp6 - chr3L 17117239 intron Rbp6 - chr3L_5_17115001 chr3L_17115001 RAL-57 1417 chr3L 17358041 17358050 chr3L 17358148 17358157 5 107 8.5 5.5 7.0 0.6 116 chr3L 17358041 3` UTR CG7692 + chr3L 17358099 intergenic CG7692 + chr3L 17358157 intergenic CG7692 + chr3L_5_17355001 chr3L_17355001 RAL-57 1418 chr3L 17376328 17376349 chr3L 17377245 17377293 9 925 24.0 31.0 27.5 0.3 965 chr3L 17376328 intron Cad74A - chr3L 17376810 intron Cad74A - chr3L 17377293 intron Cad74A - chr3L_9_17375001 chr3L_17375001 RAL-57 1419 chr3L 17385542 17385546 chr3L 17385730 17385749 5 192 19.0 37.5 28.2 0.2 207 chr3L 17385542 exon CG13731 - chr3L 17385646 exon CG13731 - chr3L 17385749 exon CG13731 - chr3L_5_17385001 chr3L_17385001 RAL-57 1420 chr3L 17385548 17385561 chr3L 17385724 17385756 31 188 18.0 32.0 25.0 1.2 208 chr3L 17385548 exon CG13731 - chr3L 17385652 exon CG13731 - chr3L 17385756 exon CG13731 - chr3L_31_17385001 chr3L_17385001 RAL-57 1421 chr3L 17408888 17408928 chr3L 17408989 17409029 24 101 12.0 7.0 9.5 2.3 141 chr3L 17408888 intron blot - chr3L 17408958 intron blot - chr3L 17409029 intron blot - chr3L_24_17405001 chr3L_17405001 RAL-57 1422 chr3L 17462270 17462299 chr3L 17462468 17462496 6 197 2.5 6.0 4.2 1.2 226 chr3L 17462270 intergenic not near genes chr3L 17462383 intergenic not near genes chr3L 17462496 intergenic not near genes chr3L_6_17460001 chr3L_17460001 RAL-57 1423 chr3L 17492467 17492491 chr3L 17492792 17492819 5 329 2.5 0.5 1.5 2.0 352 chr3L 17492467 intron Oatp74D + chr3L 17492643 intron Oatp74D + chr3L 17492819 intron Oatp74D + chr3L_5_17490001 chr3L_17490001 RAL-57 1424 chr3L 17510720 17510766 chr3L 17510829 17510875 35 109 6.5 22.0 14.2 2.3 155 chr3L 17510720 exon Oatp74D + chr3L 17510798 intron Oatp74D + chr3L 17510875 intron Oatp74D + chr3L_35_17510001 chr3L_17510001 RAL-57 1425 chr3L 17516954 17517008 chr3L 17524537 17524584 412 33 7579 8.0 6.0 7.0 4.1 7630 chr3L 17516954 intron CG7564 + chr3L 17520769 intron CG7564 + chr3L 17524584 3` UTR CG7564 + chr3L_33_17520001 chr3L_17520001 RAL-57 1426 chr3L 17585328 17585369 chr3L 17585628 17585669 24 301 49.5 60.5 55.0 0.4 341 chr3L 17585328 intron Eip74EF - chr3L 17585498 intron Eip74EF - chr3L 17585669 intron Eip74EF - chr3L_24_17585001 chr3L_17585001 RAL-57 1427 chr3L 17730830 17730841 chr3L 17738185 17738196 mdg1 6 7355 13.5 6.0 9.8 0.6 7366 chr3L 17730830 intron Ccn + chr3L 17734513 intron Ccn + chr3L 17738196 intron Ccn + chr3L_6_17730001 chr3L_17730001 RAL-57 1428 chr3L 17730843 17730878 chr3L 17738181 17738233 mdg1 15 7354 7.5 6.0 6.8 1.9 7390 chr3L 17730843 intron Ccn + chr3L 17734538 intron Ccn + chr3L 17738233 intron Ccn + chr3L_15_17730001 chr3L_17730001 RAL-57 1429 chr3L 17790578 17790636 chr3L 17790868 17790926 21 289 8.0 5.5 6.8 2.7 348 chr3L 17790578 intergenic CG42815 - chr3L 17790752 intergenic CG42815 - chr3L 17790926 intergenic CG42815 - chr3L_21_17790001 chr3L_17790001 RAL-57 1430 chr3L 17799787 17799840 chr3L 17801600 17801654 S-element 42 1814 8.5 6.5 7.5 4.9 1867 chr3L 17799787 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801654 intron NUCB1 - chr3L_42_17800001 chr3L_17800001 RAL-57 1431 chr3L 17965483 17965507 chr3L 17965631 17965652 5 144 9.0 15.5 12.2 0.4 169 chr3L 17965483 intron Eip75B - chr3L 17965568 intron Eip75B - chr3L 17965652 intron Eip75B - chr3L_5_17965001 chr3L_17965001 RAL-57 1432 chr3L 17991565 17991585 chr3L 17991668 17991688 4 103 3.0 2.0 2.5 1.1 123 chr3L 17991565 intron Eip75B - chr3L 17991626 intron Eip75B - chr3L 17991688 intron Eip75B - chr3L_4_17990001 chr3L_17990001 RAL-57 1433 chr3L 18020540 18020572 chr3L 18020670 18020703 5 131 1.0 0.5 0.8 2.8 163 chr3L 18020540 intron Eip75B - chr3L 18020622 intron Eip75B - chr3L 18020703 intron Eip75B - chr3L_5_18020001 chr3L_18020001 RAL-57 1434 chr3L 18021342 18021386 chr3L 18021447 18021503 8 111 0.5 1.5 1.0 4.0 161 chr3L 18021342 intron Eip75B - chr3L 18021422 intron Eip75B - chr3L 18021503 intron Eip75B - chr3L_8_18020001 chr3L_18020001 RAL-57 1435 chr3L 18042237 18042265 chr3L 18042340 18042368 4 101 3.5 1.5 2.5 1.1 131 chr3L 18042237 intron Eip75B - chr3L 18042302 intron Eip75B - chr3L 18042368 intron Eip75B - chr3L_4_18040001 chr3L_18040001 RAL-57 1436 chr3L 18047687 18047735 chr3L 18056767 18056784 roo 13 9078 2.0 5.0 3.5 2.9 9097 chr3L 18047687 intron Eip75B - chr3L 18052236 intron Eip75B - chr3L 18056784 intron Eip75B - chr3L_13_18050001 chr3L_18050001 RAL-57 1437 chr3L 18057952 18058010 chr3L 18058078 18058136 29 124 6.5 9.0 7.8 3.3 184 chr3L 18057952 intron Eip75B - chr3L 18058044 intron Eip75B - chr3L 18058136 intron Eip75B - chr3L_29_18055001 chr3L_18055001 RAL-57 1438 chr3L 18093944 18093988 chr3L 18094091 18094135 5 147 2.0 2.0 2.0 1.7 191 chr3L 18093944 intron CG13698 - chr3L 18094040 intron CG13698 - chr3L 18094135 intron CG13698 - chr3L_5_18090001 chr3L_18090001 RAL-57 1439 chr3L 18150300 18150341 chr3L 18150418 18150463 7 121 2.5 0.5 1.5 2.8 163 chr3L 18150300 intron CG7330 + chr3L 18150382 intron CG7330 + chr3L 18150463 intron CG7330 + chr3L_7_18150001 chr3L_18150001 RAL-57 1440 chr3L 18152706 18152754 chr3L 18152842 18152888 6 136 0.0 2.5 1.2 2.7 182 chr3L 18152706 intron CG7330 + chr3L 18152797 intron CG7330 + chr3L 18152888 intron CG7330 + chr3L_6_18150001 chr3L_18150001 RAL-57 1441 chr3L 18172668 18172703 chr3L 18172769 18172804 27 101 19.0 6.5 12.8 2.0 136 chr3L 18172668 intron W - chr3L 18172736 intron W - chr3L 18172804 intron W - chr3L_27_18170001 chr3L_18170001 RAL-57 1442 chr3L 18186604 18186619 chr3L 18186768 18186783 10 164 9.5 8.0 8.8 1.0 179 chr3L 18186604 intergenic not near genes chr3L 18186694 intergenic not near genes chr3L 18186783 intergenic not near genes chr3L_10_18185001 chr3L_18185001 RAL-57 1443 chr3L 18258836 18258883 chr3L 18258987 18259034 4 151 1.0 1.5 1.2 1.8 198 chr3L 18258836 intergenic not near genes chr3L 18258935 intergenic not near genes chr3L 18259034 intergenic not near genes chr3L_4_18255001 chr3L_18255001 RAL-57 1444 chr3L 18283906 18283954 chr3L 18284008 18284056 7 102 2.0 1.0 1.5 2.8 150 chr3L 18283906 intergenic not near genes chr3L 18283981 intergenic not near genes chr3L 18284056 intergenic not near genes chr3L_7_18280001 chr3L_18280001 RAL-57 1445 chr3L 18406106 18406154 chr3L 18406207 18406255 7 101 0.5 3.0 1.8 2.5 149 chr3L 18406106 intergenic not near genes chr3L 18406180 intergenic not near genes chr3L 18406255 intergenic not near genes chr3L_7_18405001 chr3L_18405001 RAL-57 1446 chr3L 18408731 18408754 chr3L 18408842 18408865 4 111 1.5 3.5 2.5 1.1 134 chr3L 18408731 intergenic not near genes chr3L 18408798 intergenic not near genes chr3L 18408865 intergenic not near genes chr3L_4_18405001 chr3L_18405001 RAL-57 1447 chr3L 9013689 9013692 chr3L 18417066 18417066 14 9403376 75.0 13.0 44.0 0.3 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_14_13715001 chr3L_13715001 RAL-57 1448 chr3L 9307795 9307796 chr3L 18417066 18417066 4 9109270 7.5 13.0 10.2 0.4 9109271 chr3L 9307795 intergenic not near genes chr3L 13862430 intron CG8745 - chr3L 18417066 intergenic not near genes chr3L_4_13860001 chr3L_13860001 RAL-57 1449 chr3L 18417066 18417066 chr3L 19220633 19220638 16 803569 14.0 22.5 18.2 0.8 803572 chr3L 18417066 intergenic not near genes chr3L 18818852 intron CG14073 - chr3L 19220638 intron fz2 - chr3L_16_18815001 chr3L_18815001 RAL-57 1450 chr3L 18485665 18485715 chr3L 18485776 18485825 12 112 1.5 3.0 2.2 3.8 160 chr3L 18485665 3` UTR AstC-R2 - chr3L 18485745 3` UTR AstC-R2 - chr3L 18485825 3` UTR AstC-R2 - chr3L_12_18485001 chr3L_18485001 RAL-57 1451 chr3L 18528606 18528657 chr3L 18537792 18537843 roo 23 9186 5.5 4.0 4.8 4.0 9237 chr3L 18528606 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537843 intergenic not near genes chr3L_23_18530001 chr3L_18530001 RAL-57 1452 chr3L 18593924 18593980 chr3L 18595929 18595985 Doc 24 2004 6.0 4.5 5.2 3.9 2061 chr3L 18593924 intergenic term - chr3L 18594954 intergenic not near genes chr3L 18595985 intergenic CR45389 + chr3L_24_18590001 chr3L_18590001 RAL-57 1453 chr3L 18625681 18625801 chr3L 18625791 18625921 10 116 0.0 0.0 0.0 10.0 240 chr3L 18625681 intergenic MYPT-75D + chr3L 18625801 intergenic MYPT-75D + chr3L 18625921 intergenic MYPT-75D + chr3L_10_18625001 chr3L_18625001 RAL-57 1454 chr3L 18638571 18638597 chr3L 18638690 18638701 5 116 4.0 4.0 4.0 1.0 130 chr3L 18638571 intron MYPT-75D + chr3L 18638636 intron MYPT-75D + chr3L 18638701 intron MYPT-75D + chr3L_5_18635001 chr3L_18635001 RAL-57 1455 chr3L 18677888 18677916 chr3L 18678008 18678010 9 117 2.0 6.5 4.2 1.7 122 chr3L 18677888 intergenic GNBP1 + chr3L 18677949 intergenic GNBP1 + chr3L 18678010 intergenic GNBP1 + chr3L_9_18675001 chr3L_18675001 RAL-57 1456 chr3L 18710767 18710785 chr3L 18718742 18718760 Stalker2 5 7975 1.0 2.0 1.5 2.0 7993 chr3L 18710767 intergenic not near genes chr3L 18714764 intergenic not near genes chr3L 18718760 intergenic not near genes chr3L_5_18710001 chr3L_18710001 RAL-57 1457 chr3L 18721759 18721773 chr3L 18721868 18721889 4 114 5.5 3.0 4.2 0.8 130 chr3L 18721759 intergenic CG12477 - chr3L 18721824 intergenic CG12477 - chr3L 18721889 intergenic CG12477 - chr3L_4_18720001 chr3L_18720001 RAL-57 1458 chr3L 18753524 18753562 chr3L 18753631 18753669 12 107 4.0 4.0 4.0 2.4 145 chr3L 18753524 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753669 intron ftz-f1 - chr3L_12_18750001 chr3L_18750001 RAL-57 1459 chr3L 18770623 18770669 chr3L 18770733 18770779 17 110 5.5 5.0 5.2 2.7 156 chr3L 18770623 intron ftz-f1 - chr3L 18770701 intron ftz-f1 - chr3L 18770779 intron ftz-f1 - chr3L_17_18770001 chr3L_18770001 RAL-57 1460 chr3L 18772386 18772441 chr3L 18781092 18781113 roo 28 8704 8.5 9.5 9.0 2.8 8727 chr3L 18772386 intron ftz-f1 - chr3L 18776750 intron ftz-f1 - chr3L 18781113 intron ftz-f1 - chr3L_28_18775001 chr3L_18775001 RAL-57 1461 chr3L 18784368 18784405 chr3L 18784482 18784519 12 114 4.0 4.5 4.2 2.3 151 chr3L 18784368 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784519 intron ftz-f1 - chr3L_12_18780001 chr3L_18780001 RAL-57 1462 chr3L 18788704 18788745 chr3L 18788807 18788847 6 103 1.5 2.0 1.8 2.1 143 chr3L 18788704 intron ftz-f1 - chr3L 18788776 intron ftz-f1 - chr3L 18788847 intron ftz-f1 - chr3L_6_18785001 chr3L_18785001 RAL-57 1463 chr3L 18797287 18797338 chr3L 18797396 18797446 14 108 1.5 7.0 4.2 2.7 159 chr3L 18797287 intron ftz-f1 - chr3L 18797366 intron ftz-f1 - chr3L 18797446 intron ftz-f1 - chr3L_14_18795001 chr3L_18795001 RAL-57 1464 chr3L 18810145 18810176 chr3L 18810251 18810282 10 105 9.0 4.0 6.5 1.3 137 chr3L 18810145 intron CG14073 - chr3L 18810214 intron CG14073 - chr3L 18810282 intron CG14073 - chr3L_10_18810001 chr3L_18810001 RAL-57 1465 chr3L 18843840 18843869 chr3L 18843963 18843988 8 122 7.0 3.5 5.2 1.3 148 chr3L 18843840 intron Indy - chr3L 18843914 intron Indy - chr3L 18843988 intron Indy - chr3L_8_18840001 chr3L_18840001 RAL-57 1466 chr3L 18924455 18924507 chr3L 18924556 18924608 15 101 9.0 5.5 7.2 1.8 153 chr3L 18924455 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924608 intron CG32204 - chr3L_15_18920001 chr3L_18920001 RAL-57 1467 chr3L 18933067 18933096 chr3L 18933177 18933206 6 110 3.0 0.5 1.8 2.1 139 chr3L 18933067 intron CG32204 - chr3L 18933136 intron CG32204 - chr3L 18933206 intron CG32204 - chr3L_6_18930001 chr3L_18930001 RAL-57 1468 chr3L 18965452 18965479 chr3L 18965553 18965564 4 98 0.0 4.5 2.2 1.2 112 chr3L 18965452 intergenic not near genes chr3L 18965508 intergenic not near genes chr3L 18965564 intergenic not near genes chr3L_4_18965001 chr3L_18965001 RAL-57 1469 chr3L 19008827 19008867 chr3L 19009190 19009230 jockey 27 362 15.0 15.5 15.2 1.7 403 chr3L 19008827 intron nkd - chr3L 19009028 intron nkd - chr3L 19009230 intron nkd - chr3L_27_19005001 chr3L_19005001 RAL-57 1470 chr3L 19082015 19082058 chr3L 19082138 19082183 7 120 2.0 3.5 2.8 1.8 168 chr3L 19082015 intron Mkp3 - chr3L 19082099 intron Mkp3 - chr3L 19082183 intron Mkp3 - chr3L_7_19080001 chr3L_19080001 RAL-57 1471 chr3L 19110989 19111051 chr3L 19111176 19111235 19 185 3.5 6.0 4.8 3.3 246 chr3L 19110989 intron CG14082 - chr3L 19111112 intron CG14082 - chr3L 19111235 intron CG14082 - chr3L_19_19110001 chr3L_19110001 RAL-57 1472 chr3L 19111378 19111409 chr3L 19111488 19111498 22 105 11.0 6.5 8.8 2.2 120 chr3L 19111378 intron CG14082 - chr3L 19111438 intron CG14082 - chr3L 19111498 intron CG14082 - chr3L_22_19110001 chr3L_19110001 RAL-57 1473 chr3L 19117033 19117073 chr3L 19124502 19124545 mdg1 10 7466 3.5 6.0 4.8 1.7 7512 chr3L 19117033 intron CG14082 - chr3L 19120789 intron CG14082 - chr3L 19124545 intron CG14082 - chr3L_10_19120001 chr3L_19120001 RAL-57 1474 chr3L 19127343 19127388 chr3L 19127444 19127487 8 95 5.5 5.0 5.2 1.3 144 chr3L 19127343 intron CG14082 - chr3L 19127415 intron CG14082 - chr3L 19127487 intron CG14082 - chr3L_8_19125001 chr3L_19125001 RAL-57 1475 chr3L 19127707 19127760 chr3L 19127819 19127872 14 108 1.0 1.0 1.0 7.0 165 chr3L 19127707 intron CG14082 - chr3L 19127790 intron CG14082 - chr3L 19127872 intron CG14082 - chr3L_14_19125001 chr3L_19125001 RAL-57 1476 chr3L 19208042 19208089 chr3L 19209438 19209461 Doc 7 1394 2.0 0.5 1.2 3.2 1419 chr3L 19208042 intron fz2 - chr3L 19208752 intron fz2 - chr3L 19209461 intron fz2 - chr3L_7_19205001 chr3L_19205001 RAL-57 1477 chr3L 9307795 9307796 chr3L 19220634 19220634 5 9912838 7.5 22.5 15.0 0.3 9912839 chr3L 9307795 intergenic not near genes chr3L 14264214 intergenic not near genes chr3L 19220634 intron fz2 - chr3L_5_14260001 chr3L_14260001 RAL-57 1478 chr3L 18417066 18417066 chr3L 19220634 19220634 9 803568 14.0 22.5 18.2 0.5 803568 chr3L 18417066 intergenic not near genes chr3L 18818850 intron CG14073 - chr3L 19220634 intron fz2 - chr3L_9_18815001 chr3L_18815001 RAL-57 1479 chr3L 19220634 19220634 chr3L 22908066 22908066 4 3687432 24.5 17.5 21.0 0.2 3687432 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-57 1480 chr3L 9307795 9307796 chr3L 19220637 19220637 6 9912841 7.5 22.5 15.0 0.4 9912842 chr3L 9307795 intergenic not near genes chr3L 14264216 intergenic not near genes chr3L 19220637 intron fz2 - chr3L_6_14260001 chr3L_14260001 RAL-57 1481 chr3L 18417066 18417066 chr3L 19220637 19220637 5 803571 14.0 22.5 18.2 0.3 803571 chr3L 18417066 intergenic not near genes chr3L 18818852 intron CG14073 - chr3L 19220637 intron fz2 - chr3L_5_18815001 chr3L_18815001 RAL-57 1482 chr3L 19269806 19269844 chr3L 19270027 19270052 7 211 5.5 5.5 5.5 1.1 246 chr3L 19269806 intron,exon CG14085 +,CG14088 - chr3L 19269929 intron,exon CG14085 +,CG14088 - chr3L 19270052 intron,exon CG14085 +,CG14088 - chr3L_7_19265001 chr3L_19265001 RAL-57 1483 chr3L 19282240 19282295 chr3L 19282361 19282415 27 121 9.0 9.5 9.2 2.6 175 chr3L 19282240 3` UTR Gbs-76A - chr3L 19282328 3` UTR Gbs-76A - chr3L 19282415 3` UTR Gbs-76A - chr3L_27_19280001 chr3L_19280001 RAL-57 1484 chr3L 19311431 19311470 chr3L 19311540 19311579 9 109 3.0 2.0 2.5 2.6 148 chr3L 19311431 intron pip - chr3L 19311505 intron pip - chr3L 19311579 intron pip - chr3L_9_19310001 chr3L_19310001 RAL-57 1485 chr3L 19331865 19331870 chr3L 19331977 19331982 4 112 6.5 6.5 6.5 0.5 117 chr3L 19331865 intron pip - chr3L 19331924 intron pip - chr3L 19331982 intron pip - chr3L_4_19330001 chr3L_19330001 RAL-57 1486 chr3L 19338344 19338401 chr3L 19338464 19338518 4 118 0.0 3.0 1.5 1.6 174 chr3L 19338344 intergenic not near genes chr3L 19338431 intergenic not near genes chr3L 19338518 intergenic not near genes chr3L_4_19335001 chr3L_19335001 RAL-57 1487 chr3L 19342735 19342777 chr3L 19342851 19342890 17 115 8.5 4.0 6.2 2.4 155 chr3L 19342735 3` UTR CG32206 - chr3L 19342812 3` UTR CG32206 - chr3L 19342890 3` UTR CG32206 - chr3L_17_19340001 chr3L_19340001 RAL-57 1488 chr3L 19346871 19346880 chr3L 19346954 19346983 5 99 0.5 11.5 6.0 0.7 112 chr3L 19346871 intron CG32206 - chr3L 19346927 intron CG32206 - chr3L 19346983 intron CG32206 - chr3L_5_19345001 chr3L_19345001 RAL-57 1489 chr3L 19390097 19390103 chr3L 19390213 19390219 INE-1 4 115 11.5 3.5 7.5 0.5 122 chr3L 19390097 intron CG32206 - chr3L 19390158 intron CG32206 - chr3L 19390219 intron CG32206 - chr3L_4_19390001 chr3L_19390001 RAL-57 1490 chr3L 19487697 19487704 chr3L 19487796 19487808 7 103 3.0 5.5 4.2 1.3 111 chr3L 19487697 3` UTR,5` UTR pncr009:3L -,CG32212 + chr3L 19487752 3` UTR,5` UTR pncr009:3L -,CG32212 + chr3L 19487808 intron,5` UTR pncr009:3L -,CG32212 + chr3L_7_19485001 chr3L_19485001 RAL-57 1491 chr3L 19487715 19487729 chr3L 19487791 19487833 6 99 3.0 5.5 4.2 1.2 118 chr3L 19487715 3` UTR,5` UTR pncr009:3L -,CG32212 + chr3L 19487774 intron,5` UTR pncr009:3L -,CG32212 + chr3L 19487833 intron,5` UTR pncr009:3L -,CG32212 + chr3L_6_19485001 chr3L_19485001 RAL-57 1492 chr3L 19493879 19493929 chr3L 19494262 19494311 22 382 4.5 4.5 4.5 4.0 432 chr3L 19493879 intron CG9449 - chr3L 19494095 intron CG9449 - chr3L 19494311 intron CG9449 - chr3L_22_19490001 chr3L_19490001 RAL-57 1493 chr3L 19527902 19527955 chr3L 19528006 19528058 27 103 11.5 11.5 11.5 2.2 156 chr3L 19527902 intergenic not near genes chr3L 19527980 intergenic not near genes chr3L 19528058 intergenic not near genes chr3L_27_19525001 chr3L_19525001 RAL-57 1494 chr3L 19820274 19820306 chr3L 19827848 19827880 412 26 7574 14.0 6.0 10.0 2.4 7606 chr3L 19820274 intron Deaf1 + chr3L 19824077 intron Deaf1 + chr3L 19827880 intron Deaf1 + chr3L_26_19820001 chr3L_19820001 RAL-57 1495 chr3L 19848483 19848535 chr3L 19857698 19857716 roo 23 9212 8.0 13.0 10.5 2.0 9233 chr3L 19848483 intron Papss + chr3L 19853100 intron Papss + chr3L 19857716 intron Papss + chr3L_23_19850001 chr3L_19850001 RAL-57 1496 chr3L 19861796 19861820 chr3L 19863609 19863633 S-element 7 1810 10.5 1.5 6.0 1.0 1837 chr3L 19861796 5` UTR CR45433 + chr3L 19862714 intergenic not near genes chr3L 19863633 intergenic not near genes chr3L_7_19860001 chr3L_19860001 RAL-57 1497 chr3L 19861824 19861850 chr3L 19863608 19863663 S-element 13 1810 6.0 1.5 3.8 2.7 1839 chr3L 19861824 5` UTR CR45433 + chr3L 19862744 intergenic not near genes chr3L 19863663 intergenic not near genes chr3L_13_19860001 chr3L_19860001 RAL-57 1498 chr3L 20096091 20096116 chr3L 20096202 20096240 4 113 5.0 0.0 2.5 1.1 149 chr3L 20096091 intergenic not near genes chr3L 20096166 intergenic not near genes chr3L 20096240 intergenic not near genes chr3L_4_20095001 chr3L_20095001 RAL-57 1499 chr3L 20113635 20113690 chr3L 20122917 20122972 roo 19 9282 5.5 4.0 4.8 3.3 9337 chr3L 20113635 intergenic not near genes chr3L 20118304 intergenic not near genes chr3L 20122972 intergenic not near genes chr3L_19_20115001 chr3L_20115001 RAL-57 1500 chr3L 20143079 20143101 chr3L 20143184 20143206 7 105 4.5 6.0 5.2 1.1 127 chr3L 20143079 intergenic not near genes chr3L 20143142 intergenic not near genes chr3L 20143206 intergenic not near genes chr3L_7_20140001 chr3L_20140001 RAL-57 1501 chr3L 20148259 20148315 chr3L 20148373 20148430 20 115 8.0 4.5 6.2 2.8 171 chr3L 20148259 intergenic not near genes chr3L 20148344 intergenic not near genes chr3L 20148430 intergenic not near genes chr3L_20_20145001 chr3L_20145001 RAL-57 1502 chr3L 20476733 20476764 chr3L 20484357 20484387 springer 5 7623 4.0 4.0 4.0 1.0 7654 chr3L 20476733 3` UTR isoQC + chr3L 20480560 intergenic not near genes chr3L 20484387 3` UTR ZnT77C - chr3L_5_20480001 chr3L_20480001 RAL-57 1503 chr3L 20548342 20548379 chr3L 20548456 20548493 4 114 1.5 2.5 2.0 1.3 151 chr3L 20548342 intergenic not near genes chr3L 20548418 intergenic not near genes chr3L 20548493 intergenic not near genes chr3L_4_20545001 chr3L_20545001 RAL-57 1504 chr3L 20570360 20570418 chr3L 20570468 20570526 18 108 2.0 3.0 2.5 5.1 166 chr3L 20570360 intergenic not near genes chr3L 20570443 intergenic not near genes chr3L 20570526 intergenic not near genes chr3L_18_20570001 chr3L_20570001 RAL-57 1505 chr3L 20590080 20590093 chr3L 20590613 20590641 412 4 539 3.5 2.5 3.0 1.0 561 chr3L 20590080 intergenic not near genes chr3L 20590360 intergenic not near genes chr3L 20590641 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-57 1506 chr3L 20594509 20594527 chr3L 20594609 20594615 4 99 5.5 8.5 7.0 0.5 106 chr3L 20594509 intergenic not near genes chr3L 20594562 intergenic not near genes chr3L 20594615 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-57 1507 chr3L 20752089 20752142 chr3L 20752192 20752245 5 94 1.0 1.5 1.2 2.3 156 chr3L 20752089 intergenic not near genes chr3L 20752167 intergenic not near genes chr3L 20752245 intergenic not near genes chr3L_5_20750001 chr3L_20750001 RAL-57 1508 chr3L 20821272 20821307 chr3L 20824766 20824800 NOF 7 3492 3.5 8.0 5.8 1.0 3528 chr3L 20821272 intron Pka-R1 + chr3L 20823036 intron Pka-R1 + chr3L 20824800 intron Pka-R1 + chr3L_7_20820001 chr3L_20820001 RAL-57 1509 chr3L 20849249 20849299 chr3L 20849352 20849403 21 104 7.5 10.5 9.0 2.1 154 chr3L 20849249 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849403 intron CG32432 - chr3L_21_20845001 chr3L_20845001 RAL-57 1510 chr3L 20849696 20849736 chr3L 20850070 20850107 19 372 7.0 6.5 6.8 2.4 411 chr3L 20849696 intron CG32432 - chr3L 20849902 intron CG32432 - chr3L 20850107 intron CG32432 - chr3L_19_20845001 chr3L_20845001 RAL-57 1511 chr3L 20913724 20913778 chr3L 20913829 20913885 8 100 2.5 4.0 3.2 1.9 161 chr3L 20913724 intergenic CR43930 - chr3L 20913804 intergenic CR43930 - chr3L 20913885 intergenic CR43930 - chr3L_8_20910001 chr3L_20910001 RAL-57 1512 chr3L 20916337 20916376 chr3L 20916439 20916477 11 102 2.5 3.5 3.0 2.8 140 chr3L 20916337 intergenic not near genes chr3L 20916407 intergenic not near genes chr3L 20916477 intergenic not near genes chr3L_11_20915001 chr3L_20915001 RAL-57 1513 chr3L 21010346 21010393 chr3L 21010478 21010526 12 129 8.0 4.5 6.2 1.7 180 chr3L 21010346 intron skd - chr3L 21010436 intron skd - chr3L 21010526 intron skd - chr3L_12_21010001 chr3L_21010001 RAL-57 1514 chr3L 21014892 21014947 chr3L 21023398 21023433 Tirant 16 8491 9.0 6.5 7.8 1.8 8541 chr3L 21014892 intron skd - chr3L 21019162 intron skd - chr3L 21023433 intron skd - chr3L_16_21015001 chr3L_21015001 RAL-57 1515 chr3L 21024091 21024144 chr3L 21024294 21024348 17 204 3.5 3.0 3.2 4.0 257 chr3L 21024091 intron skd - chr3L 21024220 intron skd - chr3L 21024348 intron skd - chr3L_17_21020001 chr3L_21020001 RAL-57 1516 chr3L 21082187 21082240 chr3L 21082287 21082340 9 102 2.5 3.0 2.8 2.4 153 chr3L 21082187 intron ko - chr3L 21082264 intron ko - chr3L 21082340 intron ko - chr3L_9_21080001 chr3L_21080001 RAL-57 1517 chr3L 21151868 21151890 chr3L 21156977 21156999 flea 4 5109 7.0 5.5 6.2 0.6 5131 chr3L 21151868 intron Ac78C - chr3L 21154434 intron Ac78C - chr3L 21156999 intron Ac78C - chr3L_4_21150001 chr3L_21150001 RAL-57 1518 chr3L 21243742 21243754 chr3L 21251312 21251318 412 5 7569 12.0 6.0 9.0 0.5 7576 chr3L 21243742 intron Eip78C + chr3L 21247530 intron Eip78C + chr3L 21251318 intron Eip78C + chr3L_5_21245001 chr3L_21245001 RAL-57 1519 chr3L 21306127 21306180 chr3L 21315311 21315364 roo 13 9184 3.0 0.5 1.8 4.6 9237 chr3L 21306127 3` UTR CG7632 + chr3L 21310746 intron Pc - chr3L 21315364 3` UTR Pc - chr3L_13_21310001 chr3L_21310001 RAL-57 1520 chr3L 21319501 21319559 chr3L 21319616 21319674 47 114 13.0 11.0 12.0 3.6 173 chr3L 21319501 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319674 5` UTR Rab26 + chr3L_47_21315001 chr3L_21315001 RAL-57 1521 chr3L 21361710 21361753 chr3L 21362689 21362722 G2 10 978 0.0 1.0 0.5 6.7 1012 chr3L 21361710 intergenic CG32440 + chr3L 21362216 intergenic not near genes chr3L 21362722 intergenic not near genes chr3L_10_21360001 chr3L_21360001 RAL-57 1522 chr3L 21372695 21372724 chr3L 21379228 21379257 McClintock 6 6533 6.0 3.5 4.8 1.0 6562 chr3L 21372695 intergenic not near genes chr3L 21375976 intergenic not near genes chr3L 21379257 intergenic not near genes chr3L_6_21375001 chr3L_21375001 RAL-57 1523 chr3L 21415127 21415162 chr3L 21415235 21415270 5 108 2.5 1.0 1.8 1.8 143 chr3L 21415127 intron rgn + chr3L 21415198 intron rgn + chr3L 21415270 intron rgn + chr3L_5_21415001 chr3L_21415001 RAL-57 1524 chr3L 4341331 4341335 chr3L 21448026 21448026 20 17106693 11.5 37.5 24.5 0.8 17106695 chr3L 4341331 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_20_12890001 chr3L_12890001 RAL-57 1525 chr3L 7201269 7201270 chr3L 21448026 21448026 4 14246756 12.0 37.5 24.8 0.2 14246757 chr3L 7201269 intergenic not near genes chr3L 14324648 intron,intron fz +,CR45025 - chr3L 21448026 3` UTR Syx7 + chr3L_4_14320001 chr3L_14320001 RAL-57 1526 chr3L 4341332 4341338 chr3L 21448027 21448027 21 17106694 12.0 38.0 25.0 0.8 17106695 chr3L 4341332 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_21_12890001 chr3L_12890001 RAL-57 1527 chr3L 21498827 21498870 chr3L 21500468 21500477 1360 15 1643 10.0 6.0 8.0 1.7 1650 chr3L 21498827 5` UTR,intron CR43933 +,Glg1 - chr3L 21499652 intron Glg1 - chr3L 21500477 intron Glg1 - chr3L_15_21495001 chr3L_21495001 RAL-57 1528 chr3L 21749317 21749325 chr3L 21754502 21754510 Doc 4 5184 14.5 15.5 15.0 0.2 5193 chr3L 21749317 intron Syn1 - chr3L 21751914 intron Syn1 - chr3L 21754510 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-57 1529 chr3L 21749326 21749349 chr3L 21754482 21754498 Doc 7 5168 8.0 8.0 8.0 0.8 5172 chr3L 21749326 intron Syn1 - chr3L 21751912 intron Syn1 - chr3L 21754498 intron Syn1 - chr3L_7_21750001 chr3L_21750001 RAL-57 1530 chr3L 21769027 21769084 chr3L 21769139 21769195 6 112 2.0 0.5 1.2 2.7 168 chr3L 21769027 intron,intron Syn1 -,CG42689 + chr3L 21769111 intron,intron Syn1 -,CG42689 + chr3L 21769195 intron,intron Syn1 -,CG42689 + chr3L_6_21765001 chr3L_21765001 RAL-57 1531 chr3L 21776667 21776693 chr3L 21776779 21776805 8 112 6.0 7.5 6.8 1.0 138 chr3L 21776667 intron,intron CG42689 +,CG42552 + chr3L 21776736 intron,intron CG42689 +,CG42552 + chr3L 21776805 intron,intron CG42689 +,CG42552 + chr3L_8_21775001 chr3L_21775001 RAL-57 1532 chr3L 21809958 21809968 chr3L 21810070 21810081 4 112 20.0 34.0 27.0 0.1 123 chr3L 21809958 intron eg + chr3L 21810020 intron eg + chr3L 21810081 intron eg + chr3L_4_21810001 chr3L_21810001 RAL-57 1533 chr3L 21836705 21836759 chr3L 21836816 21836870 35 110 6.0 6.5 6.2 4.9 165 chr3L 21836705 3` UTR P5CDh1 - chr3L 21836788 3` UTR P5CDh1 - chr3L 21836870 3` UTR P5CDh1 - chr3L_35_21835001 chr3L_21835001 RAL-57 1534 chr3L 21849477 21849525 chr3L 21849584 21849632 13 105 3.5 2.0 2.8 3.4 155 chr3L 21849477 intron mub + chr3L 21849554 intron mub + chr3L 21849632 intron mub + chr3L_13_21845001 chr3L_21845001 RAL-57 1535 chr3L 21874979 21875026 chr3L 21875161 21875208 5 182 2.0 3.0 2.5 1.4 229 chr3L 21874979 intron mub + chr3L 21875094 intron mub + chr3L 21875208 intron mub + chr3L_5_21875001 chr3L_21875001 RAL-57 1536 chr3L 21901012 21901033 chr3L 21901130 21901143 6 115 2.5 6.0 4.2 1.2 131 chr3L 21901012 intron mub + chr3L 21901078 intron mub + chr3L 21901143 intron mub + chr3L_6_21900001 chr3L_21900001 RAL-57 1537 chr3L 21952428 21952483 chr3L 21953195 21953251 transib1 12 768 3.0 1.5 2.2 3.8 823 chr3L 21952428 intergenic not near genes chr3L 21952840 intergenic not near genes chr3L 21953251 intergenic not near genes chr3L_12_21950001 chr3L_21950001 RAL-57 1538 chr3L 22016350 22016398 chr3L 22016482 22016539 26 133 9.5 7.0 8.2 2.8 189 chr3L 22016350 intergenic not near genes chr3L 22016444 intergenic not near genes chr3L 22016539 intergenic not near genes chr3L_26_22015001 chr3L_22015001 RAL-57 1539 chr3L 22033674 22033723 chr3L 22033776 22033826 22 102 4.0 5.5 4.8 3.8 152 chr3L 22033674 intergenic not near genes chr3L 22033750 intergenic not near genes chr3L 22033826 intergenic not near genes chr3L_22_22030001 chr3L_22030001 RAL-57 1540 chr3L 22046179 22046197 chr3L 22046307 22046325 4 128 0.5 0.5 0.5 2.7 146 chr3L 22046179 intron Oct-TyrR + chr3L 22046252 intron Oct-TyrR + chr3L 22046325 intron Oct-TyrR + chr3L_4_22045001 chr3L_22045001 RAL-57 1541 chr3L 22099661 22099681 chr3L 22105872 22105890 3S18 17 6210 17.5 10.0 13.8 1.1 6229 chr3L 22099661 intergenic not near genes chr3L 22102776 intergenic not near genes chr3L 22105890 intergenic not near genes chr3L_17_22100001 chr3L_22100001 RAL-57 1542 chr3L 22099682 22099702 chr3L 22105860 22105913 3S18 14 6199 9.5 6.0 7.8 1.6 6231 chr3L 22099682 intergenic not near genes chr3L 22102798 intergenic not near genes chr3L 22105913 intergenic not near genes chr3L_14_22100001 chr3L_22100001 RAL-57 1543 chr3L 22124923 22124981 chr3L 22125104 22125124 20 176 7.5 7.5 7.5 2.4 201 chr3L 22124923 intergenic not near genes chr3L 22125024 intergenic not near genes chr3L 22125124 intergenic not near genes chr3L_20_22125001 chr3L_22125001 RAL-57 1544 chr3L 22130474 22130522 chr3L 22130645 22130693 25 170 6.0 7.5 6.8 3.2 219 chr3L 22130474 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130693 intergenic not near genes chr3L_25_22130001 chr3L_22130001 RAL-57 1545 chr3L 22395599 22395621 chr3L 22395680 22395727 5 102 3.0 2.0 2.5 1.4 128 chr3L 22395599 intron Ten-m - chr3L 22395663 intron Ten-m - chr3L 22395727 intron Ten-m - chr3L_5_22395001 chr3L_22395001 RAL-57 1546 chr3L 22411368 22411383 chr3L 22411446 22411452 5 75 5.0 4.5 4.8 0.9 84 chr3L 22411368 intergenic not near genes chr3L 22411410 intergenic not near genes chr3L 22411452 intergenic not near genes chr3L_5_22410001 chr3L_22410001 RAL-57 1547 chr3L 22431706 22431716 chr3L 22432296 22432306 4 590 8.0 2.0 5.0 0.7 600 chr3L 22431706 intergenic not near genes chr3L 22432006 intergenic not near genes chr3L 22432306 intergenic not near genes chr3L_4_22430001 chr3L_22430001 RAL-57 1548 chr3L 22522676 22522729 chr3L 22522778 22522831 26 102 4.5 6.0 5.2 4.2 155 chr3L 22522676 intergenic not near genes chr3L 22522754 intergenic not near genes chr3L 22522831 intergenic not near genes chr3L_26_22520001 chr3L_22520001 RAL-57 1549 chr3L 22555763 22555797 chr3L 22563240 22563291 blood 13 7486 5.0 2.0 3.5 2.9 7528 chr3L 22555763 intergenic not near genes chr3L 22559527 intergenic not near genes chr3L 22563291 intergenic not near genes chr3L_13_22555001 chr3L_22555001 RAL-57 1550 chr3L 22577607 22577623 chr3L 22582420 22582433 Doc 8 4811 15.0 10.5 12.8 0.6 4826 chr3L 22577607 intergenic not near genes chr3L 22580020 intergenic not near genes chr3L 22582433 3` UTR CG14459 - chr3L_8_22580001 chr3L_22580001 RAL-57 1551 chr3L 22577625 22577651 chr3L 22582410 22582424 Doc 22 4804 7.0 8.5 7.8 2.5 4799 chr3L 22577625 intergenic not near genes chr3L 22580024 intergenic not near genes chr3L 22582424 3` UTR CG14459 - chr3L_22_22580001 chr3L_22580001 RAL-57 1552 chr3L 22587199 22587234 chr3L 22587321 22587356 7 122 3.5 3.5 3.5 1.6 157 chr3L 22587199 intron CG14459 - chr3L 22587278 intron CG14459 - chr3L 22587356 intron CG14459 - chr3L_7_22585001 chr3L_22585001 RAL-57 1553 chr3L 22617176 22617211 chr3L 22624651 22624671 blood 4 7472 5.5 2.5 4.0 0.8 7495 chr3L 22617176 intron CG14459 - chr3L 22620924 intron CG14459 - chr3L 22624671 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-57 1554 chr3L 22659036 22659076 chr3L 22659139 22659178 8 103 6.0 9.0 7.5 0.9 142 chr3L 22659036 intergenic not near genes chr3L 22659107 intergenic not near genes chr3L 22659178 intergenic not near genes chr3L_8_22655001 chr3L_22655001 RAL-57 1555 chr3L 22797310 22797368 chr3L 22797428 22797486 44 117 8.0 8.0 8.0 4.9 176 chr3L 22797310 3` UTR jim - chr3L 22797398 3` UTR jim - chr3L 22797486 3` UTR jim - chr3L_44_22795001 chr3L_22795001 RAL-57 1556 chr3L 22853439 22853723 chr3L 22853551 22853834 84 111 8.5 19.0 13.8 5.7 395 chr3L 22853439 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853636 5` UTR CR43426 + chr3L 22853834 5` UTR CR43426 + chr3L_84_22850001 chr3L_22850001 RAL-57 1557 chr3L 22865971 22866006 chr3L 22867129 22867164 Doc 12 1158 4.0 3.0 3.5 2.7 1193 chr3L 22865971 intron CG33170 + chr3L 22866568 intron CG33170 + chr3L 22867164 intron CG33170 + chr3L_12_22865001 chr3L_22865001 RAL-57 1558 chr3L 3367715 3367716 chr3L 22908066 22908066 7 19540350 16.5 17.5 17.0 0.4 19540351 chr3L 3367715 exon kst + chr3L 13137890 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_7_13135001 chr3L_13135001 RAL-57 1559 chr3L 9102751 9102804 chr3L 22908066 22908066 8 13805292 22.5 17.5 20.0 0.4 13805315 chr3L 9102751 exon bol - chr3L 16005408 exon mRpS31 + chr3L 22908066 intergenic not near genes chr3L_8_16005001 chr3L_16005001 RAL-57 1560 chr3L 9307795 9307796 chr3L 22908066 22908066 35 13600271 7.5 17.5 12.5 2.6 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_35_16105001 chr3L_16105001 RAL-57 1561 chr3L 18417066 18417066 chr3L 22908066 22908066 6 4491000 14.0 17.5 15.8 0.4 4491000 chr3L 18417066 intergenic not near genes chr3L 20662566 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_6_20660001 chr3L_20660001 RAL-57 1562 chr3L 19220633 19220637 chr3L 22908066 22908066 19 3687431 24.5 17.5 21.0 0.9 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_19_21060001 chr3L_21060001 RAL-57 1563 chr3L 20525228 20525230 chr3L 22908066 22908066 9 2382837 24.5 17.5 21.0 0.4 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_9_21715001 chr3L_21715001 RAL-57 1564 chr3L 22908066 22908066 chr3L 24821492 24821494 24 1913428 16.0 27.5 21.8 1.1 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_24_23860001 chr3L_23860001 RAL-57 1565 chr3L 9102752 9102786 chr3L 22908067 22908067 7 13805300 22.5 18.5 20.5 0.3 13805315 chr3L 9102752 exon bol - chr3L 16005410 exon mRpS31 + chr3L 22908067 intergenic not near genes chr3L_7_16005001 chr3L_16005001 RAL-57 1566 chr3L 9307795 9307796 chr3L 22908067 22908067 8 13600272 7.5 18.5 13.0 0.6 13600272 chr3L 9307795 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_8_16105001 chr3L_16105001 RAL-57 1567 chr3L 18417066 18417066 chr3L 22908067 22908067 11 4491001 14.0 18.5 16.2 0.6 4491001 chr3L 18417066 intergenic not near genes chr3L 20662566 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_11_20660001 chr3L_20660001 RAL-57 1568 chr3L 19220633 19220637 chr3L 22908067 22908067 26 3687432 24.5 18.5 21.5 1.2 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_26_21060001 chr3L_21060001 RAL-57 1569 chr3L 22908067 22908067 chr3L 24821492 24821496 12 1913427 16.0 27.5 21.8 0.5 1913429 chr3L 22908067 intergenic not near genes chr3L 23864782 intron CG40470 - chr3L 24821496 intergenic not near genes chr3L_12_23860001 chr3L_23860001 RAL-57 1570 chr3L 22936702 22936744 chr3L 22938142 22938183 4 1447 16.0 20.5 18.2 0.2 1481 chr3L 22936702 intergenic not near genes chr3L 22937442 intergenic not near genes chr3L 22938183 intergenic not near genes chr3L_4_22935001 chr3L_22935001 RAL-57 1571 chr3L 22982470 22982485 chr3L 22982893 22982908 INE-1 4 421 0.5 2.0 1.2 1.8 438 chr3L 22982470 intergenic not near genes chr3L 22982689 intergenic not near genes chr3L 22982908 intergenic not near genes chr3L_4_22980001 chr3L_22980001 RAL-57 1572 chr3L 22989858 22989888 chr3L 22996855 22996887 297 6 6998 2.0 4.5 3.2 1.4 7029 chr3L 22989858 intergenic not near genes chr3L 22993372 intergenic not near genes chr3L 22996887 intergenic not near genes chr3L_6_22990001 chr3L_22990001 RAL-57 1573 chr3L 23101271 23101309 chr3L 23101507 23101545 5 236 2.0 1.5 1.8 1.8 274 chr3L 23101271 intron CkIIalpha + chr3L 23101408 intron CkIIalpha + chr3L 23101545 intron CkIIalpha + chr3L_5_23100001 chr3L_23100001 RAL-57 1574 chr3L 23402279 23402316 chr3L 23402387 23402424 11 106 2.0 5.5 3.8 2.3 145 chr3L 23402279 intergenic not near genes chr3L 23402352 intergenic not near genes chr3L 23402424 intergenic not near genes chr3L_11_23400001 chr3L_23400001 RAL-57 1575 chr3L 24791876 24791912 chr3L 24796680 24796716 Doc 8 4804 2.5 7.0 4.8 1.4 4840 chr3L 24791876 intergenic not near genes chr3L 24794296 intergenic not near genes chr3L 24796716 intergenic not near genes chr3L_8_24790001 chr3L_24790001 RAL-57 1576 chr3L 18198930 18198931 chr3L 24821492 24821492 4 6622562 0.0 27.5 13.8 0.3 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-57 1577 chr3L 25331612 25331647 chr3L 25331727 25331760 6 111 2.0 0.0 1.0 3.0 148 chr3L 25331612 intergenic not near genes chr3L 25331686 intergenic not near genes chr3L 25331760 intergenic not near genes chr3L_6_25330001 chr3L_25330001 RAL-57 1578 chr3L 23941244 23941245 chr3L 26882298 26882299 1360 5 2941054 8.0 0.0 4.0 1.0 2941055 chr3L 23941244 intron CG40470 - chr3L 25411772 intergenic not near genes chr3L 26882299 intergenic not near genes chr3L_5_25410001 chr3L_25410001 RAL-57 1579 chr3R 2446807 2446840 chr3R 2449031 2449066 1360 5 2225 18.0 26.5 22.2 0.2 2259 chr3R 2446807 intergenic not near genes chr3R 2447936 intergenic not near genes chr3R 2449066 intergenic not near genes chr3R_5_2445001 chr3R_2445001 RAL-57 1580 chr3R 2534123 2534157 chr3R 2541703 2541730 11 7581 26.5 8.0 17.2 0.6 7607 chr3R 2534123 intergenic not near genes chr3R 2537926 intergenic not near genes chr3R 2541730 intergenic not near genes chr3R_11_2535001 chr3R_2535001 RAL-57 1581 chr3R 4063787 4063824 chr3R 4069092 4069100 4 5293 5.5 5.5 5.5 0.6 5313 chr3R 4063787 intergenic not near genes chr3R 4066444 intergenic not near genes chr3R 4069100 intergenic not near genes chr3R_4_4065001 chr3R_4065001 RAL-57 1582 chr3R 4132901 4132925 chr3R 4133080 4133104 6 179 1.0 1.5 1.2 2.7 203 chr3R 4132901 5` UTR Gfat1 + chr3R 4133002 intron Gfat1 + chr3R 4133104 intron Gfat1 + chr3R_6_4130001 chr3R_4130001 RAL-57 1583 chr3R 4206044 4206100 chr3R 4211644 4211700 mdg3 18 5597 5.5 6.0 5.8 2.6 5656 chr3R 4206044 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211700 intron CG14636 - chr3R_18_4205001 chr3R_4205001 RAL-57 1584 chr3R 4366737 4366784 chr3R 4375145 4375192 roo 14 8408 4.5 4.5 4.5 2.5 8455 chr3R 4366737 3` UTR CG1090 + chr3R 4370964 intergenic not near genes chr3R 4375192 5` UTR CR44922 + chr3R_14_4370001 chr3R_4370001 RAL-57 1585 chr3R 4408389 4408436 chr3R 4412718 4412765 Juan 23 4328 9.5 10.0 9.8 2.1 4376 chr3R 4408389 intron CG32944 - chr3R 4410577 intron CG32944 - chr3R 4412765 intron CG32944 - chr3R_23_4410001 chr3R_4410001 RAL-57 1586 chr3R 4609531 4609573 chr3R 4610715 4610761 1360 4 1188 1.0 1.0 1.0 2.0 1230 chr3R 4609531 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610761 intergenic not near genes chr3R_4_4610001 chr3R_4610001 RAL-57 1587 chr3R 4680682 4680720 chr3R 4680786 4680824 5 104 3.5 0.0 1.8 1.8 142 chr3R 4680682 intron CG43427 + chr3R 4680753 intron CG43427 + chr3R 4680824 5` UTR CG43427 + chr3R_5_4680001 chr3R_4680001 RAL-57 1588 chr3R 4753221 4753245 chr3R 4757549 4757573 F-element 16 4326 18.0 20.0 19.0 0.8 4352 chr3R 4753221 intron,intron atms +,CG44098 - chr3R 4755397 intron,intron atms +,CG44098 - chr3R 4757573 intron,exon atms +,CG44098 - chr3R_16_4755001 chr3R_4755001 RAL-57 1589 chr3R 4753249 4753257 chr3R 4757545 4757585 F-element 10 4321 14.5 18.0 16.2 0.6 4336 chr3R 4753249 intron,intron atms +,CG44098 - chr3R 4755417 intron,intron atms +,CG44098 - chr3R 4757585 intron,exon atms +,CG44098 - chr3R_10_4755001 chr3R_4755001 RAL-57 1590 chr3R 4769148 4769191 chr3R 4769237 4769254 10 98 2.0 2.0 2.0 3.3 106 chr3R 4769148 intron,intron atms +,CG44098 - chr3R 4769201 intron,intron atms +,CG44098 - chr3R 4769254 intron,intron atms +,CG44098 - chr3R_10_4765001 chr3R_4765001 RAL-57 1591 chr3R 4861561 4861576 chr3R 4861660 4861682 6 102 5.5 6.5 6.0 0.9 121 chr3R 4861561 intron opa + chr3R 4861622 intron opa + chr3R 4861682 intron opa + chr3R_6_4860001 chr3R_4860001 RAL-57 1592 chr3R 4887454 4887509 chr3R 4894856 4894911 rover 13 7396 5.5 6.5 6.0 1.9 7457 chr3R 4887454 intergenic not near genes chr3R 4891182 intergenic not near genes chr3R 4894911 intergenic not near genes chr3R_13_4890001 chr3R_4890001 RAL-57 1593 chr3R 4922326 4922362 chr3R 4922430 4922465 10 103 5.5 6.0 5.8 1.5 139 chr3R 4922326 intron Cdep + chr3R 4922396 intron Cdep + chr3R 4922465 intron Cdep + chr3R_10_4920001 chr3R_4920001 RAL-57 1594 chr3R 5019547 5019560 chr3R 21907534 21907534 4 16887982 23.0 22.5 22.8 0.2 16887987 chr3R 5019547 intron CR45585 + chr3R 13463540 3` UTR,intron CG14372 +,CR17025 - chr3R 21907534 intergenic CG6678 + chr3R_4_13460001 chr3R_13460001 RAL-57 1595 chr3R 5039033 5039057 chr3R 5039155 5039167 4 119 5.0 3.5 4.2 0.8 134 chr3R 5039033 intergenic not near genes chr3R 5039100 intergenic not near genes chr3R 5039167 intergenic not near genes chr3R_4_5035001 chr3R_5035001 RAL-57 1596 chr3R 5045828 5045868 chr3R 5052954 5052995 HMS-Beagle 8 7127 4.0 4.0 4.0 1.6 7167 chr3R 5045828 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052995 intergenic CR45588 - chr3R_8_5045001 chr3R_5045001 RAL-57 1597 chr3R 5067956 5068007 chr3R 5073498 5073549 mdg3 13 5542 6.5 6.0 6.2 1.8 5593 chr3R 5067956 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073549 intergenic not near genes chr3R_13_5070001 chr3R_5070001 RAL-57 1598 chr3R 5077282 5077303 chr3R 5077443 5077464 4 161 1.5 1.5 1.5 1.6 182 chr3R 5077282 intergenic corto - chr3R 5077373 intergenic corto - chr3R 5077464 intergenic corto - chr3R_4_5075001 chr3R_5075001 RAL-57 1599 chr3R 5081118 5081130 chr3R 5081248 5081261 11 132 1.5 12.0 6.8 1.4 143 chr3R 5081118 3` UTR corto - chr3R 5081190 3` UTR corto - chr3R 5081261 3` UTR corto - chr3R_11_5080001 chr3R_5080001 RAL-57 1600 chr3R 5158119 5158177 chr3R 5158237 5158295 28 118 4.0 9.5 6.8 3.6 176 chr3R 5158119 intron dpr16 + chr3R 5158207 intron dpr16 + chr3R 5158295 intron dpr16 + chr3R_28_5155001 chr3R_5155001 RAL-57 1601 chr3R 5191366 5191418 chr3R 5191643 5191669 7 273 28.0 35.0 31.5 0.2 303 chr3R 5191366 intron cno - chr3R 5191518 intron cno - chr3R 5191669 intron cno - chr3R_7_5190001 chr3R_5190001 RAL-57 1602 chr3R 5338375 5338416 chr3R 5343577 5343618 Rt1c 15 5202 5.0 5.5 5.2 2.4 5243 chr3R 5338375 intron mtd - chr3R 5340996 intron mtd - chr3R 5343618 intron mtd - chr3R_15_5340001 chr3R_5340001 RAL-57 1603 chr3R 5397290 5397327 chr3R 5397394 5397431 5 104 3.5 6.0 4.8 0.9 141 chr3R 5397290 3` UTR CG1172 + chr3R 5397360 3` UTR CG1172 + chr3R 5397431 3` UTR CG1172 + chr3R_5_5395001 chr3R_5395001 RAL-57 1604 chr3R 5445935 5445990 chr3R 5452420 5452475 Burdock 21 6485 5.5 5.5 5.5 3.2 6540 chr3R 5445935 intron CG14669 + chr3R 5449205 intron CG14669 + chr3R 5452475 intron CG14669 + chr3R_21_5445001 chr3R_5445001 RAL-57 1605 chr3R 5502268 5502303 chr3R 5502607 5502632 17 336 6.5 16.0 11.2 1.4 364 chr3R 5502268 exon CG31547 - chr3R 5502450 5` UTR CG31547 - chr3R 5502632 5` UTR CG31547 - chr3R_17_5500001 chr3R_5500001 RAL-57 1606 chr3R 5506816 5506868 chr3R 5506973 5507025 9 156 3.5 3.5 3.5 2.0 209 chr3R 5506816 intergenic not near genes chr3R 5506920 intergenic not near genes chr3R 5507025 intergenic not near genes chr3R_9_5505001 chr3R_5505001 RAL-57 1607 chr3R 5578780 5578820 chr3R 5578865 5578922 18 97 19.5 10.0 14.8 1.1 142 chr3R 5578780 3` UTR CRMP + chr3R 5578851 3` UTR CRMP + chr3R 5578922 3` UTR CRMP + chr3R_18_5575001 chr3R_5575001 RAL-57 1608 chr3R 5712056 5712112 chr3R 5712169 5712225 34 111 15.0 9.5 12.2 2.6 169 chr3R 5712056 3` UTR plx + chr3R 5712140 3` UTR plx + chr3R 5712225 3` UTR plx + chr3R_34_5710001 chr3R_5710001 RAL-57 1609 chr3R 5745989 5746045 chr3R 5746255 5746311 pogo 32 266 7.5 5.5 6.5 4.3 322 chr3R 5745989 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746311 3` UTR Madm + chr3R_32_5745001 chr3R_5745001 RAL-57 1610 chr3R 5746991 5747040 chr3R 5753207 5753256 diver 27 6215 11.5 4.5 8.0 3.0 6265 chr3R 5746991 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753256 intergenic CG2091 - chr3R_27_5750001 chr3R_5750001 RAL-57 1611 chr3R 5772350 5772409 chr3R 5772533 5772592 34 182 6.0 6.5 6.2 4.7 242 chr3R 5772350 intron CG2082 - chr3R 5772471 intron CG2082 - chr3R 5772592 intron CG2082 - chr3R_34_5770001 chr3R_5770001 RAL-57 1612 chr3R 5809087 5809144 chr3R 5809353 5809410 pogo 36 265 8.5 8.0 8.2 3.9 323 chr3R 5809087 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809410 3` UTR CG11000 + chr3R_36_5805001 chr3R_5805001 RAL-57 1613 chr3R 5822357 5822399 chr3R 5823549 5823591 1360 27 1192 11.0 15.5 13.2 1.9 1234 chr3R 5822357 3` UTR CG2023 - chr3R 5822974 3` UTR CG2023 - chr3R 5823591 3` UTR CG2023 - chr3R_27_5820001 chr3R_5820001 RAL-57 1614 chr3R 5822402 5822408 chr3R 5823594 5823600 1360 6 1192 9.0 31.5 20.2 0.3 1198 chr3R 5822402 3` UTR CG2023 - chr3R 5823001 3` UTR CG2023 - chr3R 5823600 3` UTR CG2023 - chr3R_6_5820001 chr3R_5820001 RAL-57 1615 chr3R 5846862 5846904 chr3R 5846963 5846980 8 98 3.0 2.0 2.5 2.3 118 chr3R 5846862 intergenic CG1213 +,CG14676 + chr3R 5846921 intergenic CG14676 +,CG1213 + chr3R 5846980 intergenic CG14676 +,CG1213 + chr3R_8_5845001 chr3R_5845001 RAL-57 1616 chr3R 5895948 5895984 chr3R 5896187 5896223 16 238 2.0 7.0 4.5 2.9 275 chr3R 5895948 intron CG34113 - chr3R 5896086 intron CG34113 - chr3R 5896223 intron CG34113 - chr3R_16_5895001 chr3R_5895001 RAL-57 1617 chr3R 5927563 5927585 chr3R 5927805 5927838 pogo 7 242 2.5 5.0 3.8 1.5 275 chr3R 5927563 intron CG34113 - chr3R 5927700 intron CG34113 - chr3R 5927838 intron CG34113 - chr3R_7_5925001 chr3R_5925001 RAL-57 1618 chr3R 5935336 5935393 chr3R 5935437 5935494 23 100 5.5 2.0 3.8 4.8 158 chr3R 5935336 intron CG34113 - chr3R 5935415 intron CG34113 - chr3R 5935494 intron CG34113 - chr3R_23_5935001 chr3R_5935001 RAL-57 1619 chr3R 6006307 6006358 chr3R 6006414 6006468 22 108 3.5 9.5 6.5 2.9 161 chr3R 6006307 intron Rm62 - chr3R 6006388 intron Rm62 - chr3R 6006468 intron Rm62 - chr3R_22_6005001 chr3R_6005001 RAL-57 1620 chr3R 6015946 6015983 chr3R 6024448 6024488 Tirant 7 8496 4.0 5.5 4.8 1.2 8542 chr3R 6015946 intergenic not near genes chr3R 6020217 intergenic not near genes chr3R 6024488 intergenic not near genes chr3R_7_6020001 chr3R_6020001 RAL-57 1621 chr3R 6043627 6043672 chr3R 6043858 6043895 10 237 5.5 5.5 5.5 1.5 268 chr3R 6043627 intergenic not near genes chr3R 6043761 intergenic not near genes chr3R 6043895 intergenic not near genes chr3R_10_6040001 chr3R_6040001 RAL-57 1622 chr3R 6048423 6048476 chr3R 6048531 6048583 16 103 1.5 4.5 3.0 4.0 160 chr3R 6048423 intergenic not near genes chr3R 6048503 intergenic not near genes chr3R 6048583 intergenic not near genes chr3R_16_6045001 chr3R_6045001 RAL-57 1623 chr3R 6090420 6090420 chr3R 10451877 10451877 10 4361457 12.5 12.5 12.5 0.7 4361457 chr3R 6090420 intron Gasp - chr3R 8271148 intergenic not near genes chr3R 10451877 intergenic not near genes chr3R_10_8270001 chr3R_8270001 RAL-57 1624 chr3R 6158495 6158531 chr3R 6167103 6167137 Tirant 15 8604 19.0 11.5 15.2 0.9 8642 chr3R 6158495 intergenic not near genes chr3R 6162816 intergenic not near genes chr3R 6167137 intergenic CG1077 + chr3R_15_6160001 chr3R_6160001 RAL-57 1625 chr3R 6175158 6175194 chr3R 6182455 6182489 HMS-Beagle2 12 7292 3.5 7.0 5.2 1.9 7331 chr3R 6175158 intergenic Osi1 + chr3R 6178824 intron CR45194 + chr3R 6182489 intergenic CR45194 + chr3R_12_6175001 chr3R_6175001 RAL-57 1626 chr3R 6191152 6191199 chr3R 6191255 6191304 23 104 4.5 8.5 6.5 3.1 152 chr3R 6191152 intron NPFR + chr3R 6191228 intron NPFR + chr3R 6191304 intron NPFR + chr3R_23_6190001 chr3R_6190001 RAL-57 1627 chr3R 6206271 6206292 chr3R 6206510 6206533 BS 11 239 12.5 12.0 12.2 0.8 262 chr3R 6206271 exon Osi24 + chr3R 6206402 intron Osi24 + chr3R 6206533 intron Osi24 + chr3R_11_6205001 chr3R_6205001 RAL-57 1628 chr3R 6206294 6206319 chr3R 6206508 6206542 BS 13 236 6.5 9.5 8.0 1.4 248 chr3R 6206294 exon Osi24 + chr3R 6206418 intron Osi24 + chr3R 6206542 intron Osi24 + chr3R_13_6205001 chr3R_6205001 RAL-57 1629 chr3R 6308281 6308517 chr3R 21907534 21907535 9 15599131 63.0 22.5 42.8 0.2 15599254 chr3R 6308281 exon CG31556 - chr3R 14107908 5` UTR CG12402 - chr3R 21907535 intergenic CG6678 + chr3R_9_14105001 chr3R_14105001 RAL-57 1630 chr3R 6330758 6330810 chr3R 6330895 6330950 26 139 5.0 4.5 4.8 4.5 192 chr3R 6330758 exon Osi18 + chr3R 6330854 intron Osi18 + chr3R 6330950 intron Osi18 + chr3R_26_6330001 chr3R_6330001 RAL-57 1631 chr3R 6414023 6414065 chr3R 21907534 21907534 4 15493490 41.5 22.5 32.0 0.1 15493511 chr3R 6414023 intron gpp + chr3R 14160778 intergenic CG31327 - chr3R 21907534 intergenic CG6678 + chr3R_4_14160001 chr3R_14160001 RAL-57 1632 chr3R 6461572 6461611 chr3R 6461677 6461716 5 105 4.5 3.0 3.8 1.0 144 chr3R 6461572 intergenic not near genes chr3R 6461644 intergenic not near genes chr3R 6461716 intergenic not near genes chr3R_5_6460001 chr3R_6460001 RAL-57 1633 chr3R 6484043 6484089 chr3R 6484161 6484207 17 118 6.0 6.0 6.0 2.4 164 chr3R 6484043 intron CG15186 + chr3R 6484125 intron CG15186 + chr3R 6484207 intron CG15186 + chr3R_17_6480001 chr3R_6480001 RAL-57 1634 chr3R 6496637 6496686 chr3R 6496750 6496799 11 113 3.5 7.0 5.2 1.8 162 chr3R 6496637 intergenic not near genes chr3R 6496718 intergenic not near genes chr3R 6496799 intergenic not near genes chr3R_11_6495001 chr3R_6495001 RAL-57 1635 chr3R 6501483 6501505 chr3R 6501573 6501613 4 103 3.5 1.5 2.5 1.1 130 chr3R 6501483 intergenic not near genes chr3R 6501548 intergenic not near genes chr3R 6501613 intergenic not near genes chr3R_4_6500001 chr3R_6500001 RAL-57 1636 chr3R 6510003 6510050 chr3R 6515109 6515156 jockey 4 5106 1.0 3.5 2.2 1.2 5153 chr3R 6510003 intergenic not near genes chr3R 6512580 intergenic not near genes chr3R 6515156 intergenic not near genes chr3R_4_6510001 chr3R_6510001 RAL-57 1637 chr3R 6519090 6519146 chr3R 6519223 6519282 26 134 7.0 7.0 7.0 3.2 192 chr3R 6519090 intergenic not near genes chr3R 6519186 intergenic not near genes chr3R 6519282 intergenic not near genes chr3R_26_6515001 chr3R_6515001 RAL-57 1638 chr3R 6610024 6610059 chr3R 6610196 6610229 10 173 5.5 2.0 3.8 2.1 205 chr3R 6610024 intergenic not near genes chr3R 6610126 intergenic not near genes chr3R 6610229 intergenic not near genes chr3R_10_6610001 chr3R_6610001 RAL-57 1639 chr3R 6621853 6621874 chr3R 6621970 6621991 5 116 9.5 5.5 7.5 0.6 138 chr3R 6621853 intergenic not near genes chr3R 6621922 intergenic not near genes chr3R 6621991 intergenic not near genes chr3R_5_6620001 chr3R_6620001 RAL-57 1640 chr3R 6624247 6624283 chr3R 6624353 6624390 12 107 2.5 0.5 1.5 4.8 143 chr3R 6624247 intergenic not near genes chr3R 6624318 intergenic not near genes chr3R 6624390 intergenic not near genes chr3R_12_6620001 chr3R_6620001 RAL-57 1641 chr3R 6639886 6639907 chr3R 6639989 6640010 7 101 5.5 0.0 2.8 1.8 124 chr3R 6639886 intergenic not near genes chr3R 6639948 intergenic not near genes chr3R 6640010 intergenic not near genes chr3R_7_6635001 chr3R_6635001 RAL-57 1642 chr3R 6655738 6655795 chr3R 6656034 6656082 35 295 10.5 10.5 10.5 3.0 344 chr3R 6655738 exon Taf1 + chr3R 6655910 3` UTR Taf1 + chr3R 6656082 intergenic Taf1 +,CG1307 - chr3R_35_6655001 chr3R_6655001 RAL-57 1643 chr3R 6663582 6663635 chr3R 6663684 6663739 30 100 9.0 11.0 10.0 2.7 157 chr3R 6663582 intron lab - chr3R 6663660 intron lab - chr3R 6663739 intron lab - chr3R_30_6660001 chr3R_6660001 RAL-57 1644 chr3R 6670546 6670603 chr3R 6670680 6670737 16 134 2.0 1.5 1.8 5.7 191 chr3R 6670546 intron lab - chr3R 6670642 intron lab - chr3R 6670737 intron lab - chr3R_16_6670001 chr3R_6670001 RAL-57 1645 chr3R 6705670 6705709 chr3R 6705918 6705958 22 249 0.5 5.5 3.0 5.5 288 chr3R 6705670 intergenic not near genes chr3R 6705814 intergenic not near genes chr3R 6705958 intergenic not near genes chr3R_22_6705001 chr3R_6705001 RAL-57 1646 chr3R 6737495 6737527 chr3R 6739285 6739339 Doc 14 1804 6.5 7.5 7.0 1.8 1844 chr3R 6737495 intron pb - chr3R 6738417 intron pb - chr3R 6739339 intron pb - chr3R_14_6735001 chr3R_6735001 RAL-57 1647 chr3R 6740984 6741035 chr3R 6741092 6741140 12 105 7.5 5.5 6.5 1.6 156 chr3R 6740984 intron pb - chr3R 6741062 intron pb - chr3R 6741140 intron pb - chr3R_12_6740001 chr3R_6740001 RAL-57 1648 chr3R 6827999 6828036 chr3R 6828100 6828137 9 100 3.0 2.5 2.8 2.4 138 chr3R 6827999 intron Scr - chr3R 6828068 intron Scr - chr3R 6828137 intron Scr - chr3R_9_6825001 chr3R_6825001 RAL-57 1649 chr3R 6914720 6914761 chr3R 6914846 6914855 15 120 3.0 3.5 3.2 3.6 135 chr3R 6914720 intron Antp - chr3R 6914788 intron Antp - chr3R 6914855 intron Antp - chr3R_15_6910001 chr3R_6910001 RAL-57 1650 chr3R 6958921 6958954 chr3R 6959142 6959190 16 233 0.5 6.0 3.2 3.8 269 chr3R 6958921 intron Antp - chr3R 6959056 intron Antp - chr3R 6959190 intron Antp - chr3R_16_6955001 chr3R_6955001 RAL-57 1651 chr3R 7036736 7036786 chr3R 7036840 7036890 18 103 4.5 6.0 5.2 2.9 154 chr3R 7036736 intergenic not near genes chr3R 7036813 intergenic not near genes chr3R 7036890 intergenic not near genes chr3R_18_7035001 chr3R_7035001 RAL-57 1652 chr3R 7060252 7060265 chr3R 7060358 7060370 4 105 4.0 3.0 3.5 0.9 118 chr3R 7060252 3` UTR dj + chr3R 7060311 3` UTR dj + chr3R 7060370 3` UTR dj + chr3R_4_7060001 chr3R_7060001 RAL-57 1653 chr3R 7092762 7092815 chr3R 7093351 7093404 21 584 3.5 5.0 4.2 4.0 642 chr3R 7092762 3` UTR CR43685 - chr3R 7093083 intron CR43685 - chr3R 7093404 3` UTR CR43685 - chr3R_21_7090001 chr3R_7090001 RAL-57 1654 chr3R 7103267 7103282 chr3R 7103361 7103383 8 94 14.0 9.0 11.5 0.6 116 chr3R 7103267 intron Alh - chr3R 7103325 intron Alh - chr3R 7103383 intron Alh - chr3R_8_7100001 chr3R_7100001 RAL-57 1655 chr3R 7103283 7103317 chr3R 7103360 7103394 21 87 7.5 10.0 8.8 2.1 111 chr3R 7103283 intron Alh - chr3R 7103338 intron Alh - chr3R 7103394 intron Alh - chr3R_21_7100001 chr3R_7100001 RAL-57 1656 chr3R 7126481 7126525 chr3R 7126601 7126645 20 120 8.5 7.0 7.8 2.3 164 chr3R 7126481 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126563 3` UTR CG10068 - chr3R 7126645 3` UTR CG10068 - chr3R_20_7125001 chr3R_7125001 RAL-57 1657 chr3R 7173655 7173704 chr3R 7173760 7173809 13 105 3.5 5.0 4.2 2.5 154 chr3R 7173655 intron sas + chr3R 7173732 intron sas + chr3R 7173809 intron sas + chr3R_13_7170001 chr3R_7170001 RAL-57 1658 chr3R 7187714 7187741 chr3R 7187827 7187854 7 113 6.0 6.5 6.2 1.0 140 chr3R 7187714 intron lap + chr3R 7187784 intron lap + chr3R 7187854 intron lap + chr3R_7_7185001 chr3R_7185001 RAL-57 1659 chr3R 7319774 7319789 chr3R 7319880 7319894 6 104 7.5 5.5 6.5 0.8 120 chr3R 7319774 intergenic not near genes chr3R 7319834 intergenic not near genes chr3R 7319894 intergenic not near genes chr3R_6_7315001 chr3R_7315001 RAL-57 1660 chr3R 7402174 7402187 chr3R 7402279 7402318 8 122 8.5 5.0 6.8 1.0 144 chr3R 7402174 intergenic not near genes chr3R 7402246 intergenic not near genes chr3R 7402318 intergenic not near genes chr3R_8_7400001 chr3R_7400001 RAL-57 1661 chr3R 7660765 7660801 chr3R 7660881 7660917 12 114 8.0 5.5 6.8 1.5 152 chr3R 7660765 intron Nlg1 + chr3R 7660841 intron Nlg1 + chr3R 7660917 intron Nlg1 + chr3R_12_7660001 chr3R_7660001 RAL-57 1662 chr3R 7660803 7660818 chr3R 7660874 7660912 8 87 6.0 5.0 5.5 1.2 109 chr3R 7660803 intron Nlg1 + chr3R 7660858 intron Nlg1 + chr3R 7660912 intron Nlg1 + chr3R_8_7660001 chr3R_7660001 RAL-57 1663 chr3R 7694553 7694606 chr3R 7713639 7713692 invader3 12 19086 5.5 5.0 5.2 1.9 19139 chr3R 7694553 3` UTR Nlg1 + chr3R 7704122 intergenic not near genes chr3R 7713692 intergenic not near genes chr3R_12_7700001 chr3R_7700001 RAL-57 1664 chr3R 7729444 7729493 chr3R 7737407 7737453 Stalker2 15 7963 4.0 6.5 5.2 2.4 8009 chr3R 7729444 intergenic not near genes chr3R 7733448 intergenic not near genes chr3R 7737453 intergenic not near genes chr3R_15_7730001 chr3R_7730001 RAL-57 1665 chr3R 7809913 7809951 chr3R 7810001 7810054 26 98 7.5 4.5 6.0 3.7 141 chr3R 7809913 5` UTR CG2993 - chr3R 7809984 5` UTR CG2993 - chr3R 7810054 intergenic CG2993 -,CG31472 + chr3R_26_7805001 chr3R_7805001 RAL-57 1666 chr3R 7973311 7973341 chr3R 7974398 7974428 1360 6 1087 1.0 3.0 2.0 2.0 1117 chr3R 7973311 intergenic not near genes chr3R 7973870 intergenic not near genes chr3R 7974428 3` UTR CD98hc - chr3R_6_7970001 chr3R_7970001 RAL-57 1667 chr3R 8013892 8013930 chr3R 8022838 8022886 14 8946 66.5 43.0 54.8 0.3 8994 chr3R 8013892 exon Pbp95 + chr3R 8018389 exon CG2747 - chr3R 8022886 exon CG2747 - chr3R_14_8015001 chr3R_8015001 RAL-57 1668 chr3R 8049033 8049061 chr3R 8049632 8049660 7 598 4.0 4.0 4.0 1.4 627 chr3R 8049033 intron CG43060 + chr3R 8049346 intron,intron CG43060 +,CG43618 + chr3R 8049660 intron CG43060 + chr3R_7_8045001 chr3R_8045001 RAL-57 1669 chr3R 8082560 8082594 chr3R 8082662 8082696 20 102 13.5 13.5 13.5 1.4 136 chr3R 8082560 intron mAChR-B + chr3R 8082628 intron mAChR-B + chr3R 8082696 intron mAChR-B + chr3R_20_8080001 chr3R_8080001 RAL-57 1670 chr3R 8090245 8090304 chr3R 8090447 8090505 14 202 1.5 2.0 1.8 5.0 260 chr3R 8090245 5` UTR CR44330 + chr3R 8090375 intergenic CR44330 + chr3R 8090505 intergenic CR44330 + chr3R_14_8090001 chr3R_8090001 RAL-57 1671 chr3R 8090540 8090558 chr3R 8094042 8094060 297 5 3502 7.5 7.0 7.2 0.6 3520 chr3R 8090540 intergenic CR44330 + chr3R 8092300 intergenic not near genes chr3R 8094060 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 RAL-57 1672 chr3R 8101751 8101788 chr3R 8104860 8104868 G2 4 3102 1.5 3.0 2.2 1.2 3117 chr3R 8101751 exon CG7900 + chr3R 8103310 intron CG7900 + chr3R 8104868 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-57 1673 chr3R 8207539 8207584 chr3R 8208409 8208454 F-element 5 868 4.5 2.0 3.2 1.2 915 chr3R 8207539 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208454 intergenic not near genes chr3R_5_8205001 chr3R_8205001 RAL-57 1674 chr3R 8339246 8339247 chr3R 21907534 21907536 22 13568289 28.0 22.5 25.2 0.8 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_22_15120001 chr3R_15120001 RAL-57 1675 chr3R 8375109 8375157 chr3R 8375218 8375266 16 105 3.0 2.0 2.5 4.6 157 chr3R 8375109 intron CG45263 - chr3R 8375188 intron CG45263 - chr3R 8375266 intron CG45263 - chr3R_16_8375001 chr3R_8375001 RAL-57 1676 chr3R 8402995 8403000 chr3R 8412171 8412190 roo 4 9183 10.0 10.5 10.2 0.4 9195 chr3R 8402995 intron CG45263 - chr3R 8407592 intron CG45263 - chr3R 8412190 intron CG45263 - chr3R_4_8405001 chr3R_8405001 RAL-57 1677 chr3R 8403010 8403038 chr3R 8412171 8412228 roo 5 9178 5.0 10.5 7.8 0.6 9218 chr3R 8403010 intron CG45263 - chr3R 8407619 intron CG45263 - chr3R 8412228 intron CG45263 - chr3R_5_8405001 chr3R_8405001 RAL-57 1678 chr3R 8552351 8552383 chr3R 8552456 8552488 4 105 3.5 1.0 2.2 1.2 137 chr3R 8552351 intergenic Or85d + chr3R 8552420 intergenic Or85d + chr3R 8552488 intergenic Or85d + chr3R_4_8550001 chr3R_8550001 RAL-57 1679 chr3R 8570477 8570505 chr3R 8575137 8575165 HMS-Beagle 8 4660 0.0 7.5 3.8 1.7 4688 chr3R 8570477 intergenic not near genes chr3R 8572821 intergenic not near genes chr3R 8575165 intergenic not near genes chr3R_8_8570001 chr3R_8570001 RAL-57 1680 chr3R 8601759 8601790 chr3R 8610937 8610964 roo 4 9177 2.0 1.0 1.5 1.6 9205 chr3R 8601759 intron 5-HT2B + chr3R 8606362 intron 5-HT2B + chr3R 8610964 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-57 1681 chr3R 8707340 8707382 chr3R 8709804 8709807 jockey 17 2463 5.5 7.5 6.5 2.3 2467 chr3R 8707340 intergenic not near genes chr3R 8708574 intergenic not near genes chr3R 8709807 intergenic not near genes chr3R_17_8705001 chr3R_8705001 RAL-57 1682 chr3R 8917864 8917912 chr3R 8917969 8918015 11 105 2.0 3.0 2.5 3.1 151 chr3R 8917864 intron pyd - chr3R 8917940 intron pyd - chr3R 8918015 intron pyd - chr3R_11_8915001 chr3R_8915001 RAL-57 1683 chr3R 9036352 9036400 chr3R 9036455 9036503 7 103 3.5 3.5 3.5 1.6 151 chr3R 9036352 intron neur - chr3R 9036428 intron neur - chr3R 9036503 intron neur - chr3R_7_9035001 chr3R_9035001 RAL-57 1684 chr3R 9082024 9082068 chr3R 9082143 9082187 26 116 5.5 9.0 7.2 3.2 163 chr3R 9082024 intron pum - chr3R 9082106 intron pum - chr3R 9082187 intron pum - chr3R_26_9080001 chr3R_9080001 RAL-57 1685 chr3R 9108841 9108855 chr3R 9108942 9108956 5 101 1.5 2.0 1.8 1.8 115 chr3R 9108841 intron pum - chr3R 9108898 intron pum - chr3R 9108956 intron pum - chr3R_5_9105001 chr3R_9105001 RAL-57 1686 chr3R 9192034 9192051 chr3R 9192144 9192160 6 108 8.5 5.0 6.8 0.8 126 chr3R 9192034 intron pum - chr3R 9192097 intron pum - chr3R 9192160 intron pum - chr3R_6_9190001 chr3R_9190001 RAL-57 1687 chr3R 9204223 9204275 chr3R 9204335 9204387 11 101 4.5 1.0 2.8 2.9 164 chr3R 9204223 intron pum - chr3R 9204305 intron pum - chr3R 9204387 intron pum - chr3R_11_9200001 chr3R_9200001 RAL-57 1688 chr3R 9319567 9319594 chr3R 9320010 9320054 jockey 5 457 4.0 2.0 3.0 1.2 487 chr3R 9319567 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320054 intron CG8861 - chr3R_5_9315001 chr3R_9315001 RAL-57 1689 chr3R 9323482 9323529 chr3R 9323594 9323633 5 104 1.0 2.5 1.8 1.8 151 chr3R 9323482 intron CG8861 - chr3R 9323558 intron CG8861 - chr3R 9323633 intron CG8861 - chr3R_5_9320001 chr3R_9320001 RAL-57 1690 chr3R 9361806 9361835 chr3R 9362072 9362101 pogo 5 266 2.5 4.0 3.2 1.2 295 chr3R 9361806 3` UTR CG45050 + chr3R 9361954 3` UTR CG45050 + chr3R 9362101 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-57 1691 chr3R 9442263 9442306 chr3R 9442639 9442662 20 373 18.5 1.0 9.8 1.9 399 chr3R 9442263 intron ps + chr3R 9442462 intron ps + chr3R 9442662 intron ps + chr3R_20_9440001 chr3R_9440001 RAL-57 1692 chr3R 9596327 9596364 chr3R 9596578 9596607 6 244 5.0 3.0 4.0 1.2 280 chr3R 9596327 intron CG8312 + chr3R 9596467 intron CG8312 + chr3R 9596607 intron CG8312 + chr3R_6_9595001 chr3R_9595001 RAL-57 1693 chr3R 9620956 9620956 chr3R 21907534 21907536 15 12286579 26.0 22.5 24.2 0.6 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_15_15760001 chr3R_15760001 RAL-57 1694 chr3R 9644558 9644610 chr3R 9644664 9644716 28 105 3.5 6.5 5.0 4.7 158 chr3R 9644558 intron Dh44 + chr3R 9644637 intron Dh44 + chr3R 9644716 intron Dh44 + chr3R_28_9640001 chr3R_9640001 RAL-57 1695 chr3R 9877177 9877230 chr3R 9877278 9877330 19 100 4.5 5.0 4.8 3.3 153 chr3R 9877177 intron,3` UTR Glut4EF +,CR45029 - chr3R 9877254 intron,intron Glut4EF +,CR45029 - chr3R 9877330 intron,intron Glut4EF +,CR45029 - chr3R_19_9875001 chr3R_9875001 RAL-57 1696 chr3R 9942294 9942344 chr3R 9942398 9942414 21 94 6.5 5.0 5.8 3.1 120 chr3R 9942294 intron Glut4EF + chr3R 9942354 intron Glut4EF + chr3R 9942414 intron Glut4EF + chr3R_21_9940001 chr3R_9940001 RAL-57 1697 chr3R 10231736 10231812 chr3R 10237363 10237414 mdg3 16 5609 0.0 4.0 2.0 5.3 5678 chr3R 10231736 intron CG42795 + chr3R 10234575 intron CG42795 + chr3R 10237414 intron CG42795 + chr3R_16_10230001 chr3R_10230001 RAL-57 1698 chr3R 10255361 10255377 chr3R 10260826 10260842 I-element 7 5465 7.0 10.5 8.8 0.7 5481 chr3R 10255361 3` UTR Sirt6 - chr3R 10258102 intron Sirt6 - chr3R 10260842 exon Sirt6 - chr3R_7_10255001 chr3R_10255001 RAL-57 1699 chr3R 10401880 10401924 chr3R 10402087 10402123 19 212 4.0 4.0 4.0 3.8 243 chr3R 10401880 exon mthl11 + chr3R 10402002 intron mthl11 + chr3R 10402123 exon mthl11 + chr3R_19_10400001 chr3R_10400001 RAL-57 1700 chr3R 10434443 10434466 chr3R 10434624 10434647 6 181 7.5 5.5 6.5 0.8 204 chr3R 10434443 intergenic Cyp12e1 + chr3R 10434545 intergenic Cyp12e1 + chr3R 10434647 intergenic Cyp12e1 + chr3R_6_10430001 chr3R_10430001 RAL-57 1701 chr3R 6090419 6090421 chr3R 10451877 10451877 7 4361457 13.0 12.5 12.8 0.5 4361458 chr3R 6090419 intron Gasp - chr3R 8271148 intergenic not near genes chr3R 10451877 intergenic not near genes chr3R_7_8270001 chr3R_8270001 RAL-57 1702 chr3R 10451877 10451877 chr3R 12722496 12722496 6 2270619 13.5 25.5 19.5 0.3 2270619 chr3R 10451877 intergenic not near genes chr3R 11587186 exon CG6791 - chr3R 12722496 intergenic Men - chr3R_6_11585001 chr3R_11585001 RAL-57 1703 chr3R 10535309 10535343 chr3R 10535427 10535461 7 117 0.0 2.0 1.0 3.5 152 chr3R 10535309 intron hth - chr3R 10535385 intron hth - chr3R 10535461 intron hth - chr3R_7_10535001 chr3R_10535001 RAL-57 1704 chr3R 10727654 10727675 chr3R 10727744 10727776 5 99 1.0 1.0 1.0 2.5 122 chr3R 10727654 intergenic not near genes chr3R 10727715 intergenic not near genes chr3R 10727776 intergenic not near genes chr3R_5_10725001 chr3R_10725001 RAL-57 1705 chr3R 10817197 10817249 chr3R 10817305 10817357 5 107 2.5 2.0 2.2 1.6 160 chr3R 10817197 3` UTR CG4089 + chr3R 10817277 3` UTR CG4089 + chr3R 10817357 3` UTR CG4089 + chr3R_5_10815001 chr3R_10815001 RAL-57 1706 chr3R 10868603 10868624 chr3R 10868670 10868708 5 71 4.5 3.5 4.0 1.0 105 chr3R 10868603 5` UTR SelR - chr3R 10868656 intergenic SelR -,Tsp86D + chr3R 10868708 5` UTR Tsp86D + chr3R_5_10865001 chr3R_10865001 RAL-57 1707 chr3R 10904883 10904937 chr3R 10905112 10905166 13 229 3.5 2.0 2.8 3.4 283 chr3R 10904883 intergenic not near genes chr3R 10905024 intergenic not near genes chr3R 10905166 intergenic not near genes chr3R_13_10905001 chr3R_10905001 RAL-57 1708 chr3R 10906824 10906850 chr3R 10906911 10906929 7 93 3.0 2.0 2.5 2.0 105 chr3R 10906824 intergenic not near genes chr3R 10906876 intergenic not near genes chr3R 10906929 intergenic not near genes chr3R_7_10905001 chr3R_10905001 RAL-57 1709 chr3R 10919696 10919713 chr3R 10919770 10919816 4 96 1.5 1.0 1.2 1.8 120 chr3R 10919696 intergenic not near genes chr3R 10919756 intergenic not near genes chr3R 10919816 intergenic not near genes chr3R_4_10915001 chr3R_10915001 RAL-57 1710 chr3R 10920023 10920077 chr3R 10920125 10920179 8 103 2.0 2.5 2.2 2.5 156 chr3R 10920023 intergenic not near genes chr3R 10920101 intergenic not near genes chr3R 10920179 intergenic not near genes chr3R_8_10920001 chr3R_10920001 RAL-57 1711 chr3R 10952733 10952779 chr3R 10952840 10952873 10 106 1.0 3.0 2.0 3.3 140 chr3R 10952733 intergenic not near genes chr3R 10952803 intergenic not near genes chr3R 10952873 intergenic not near genes chr3R_10_10950001 chr3R_10950001 RAL-57 1712 chr3R 10970371 10970423 chr3R 10970479 10970505 15 101 1.0 8.5 4.8 2.6 134 chr3R 10970371 intergenic CR45561 + chr3R 10970438 intergenic CR45561 + chr3R 10970505 intergenic CR45561 + chr3R_15_10970001 chr3R_10970001 RAL-57 1713 chr3R 11102305 11102326 chr3R 11102411 11102425 4 100 8.5 8.5 8.5 0.4 120 chr3R 11102305 intergenic not near genes chr3R 11102365 intergenic not near genes chr3R 11102425 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-57 1714 chr3R 11102333 11102352 chr3R 11102404 11102420 4 77 5.5 6.5 6.0 0.6 87 chr3R 11102333 intergenic not near genes chr3R 11102376 intergenic not near genes chr3R 11102420 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-57 1715 chr3R 11155020 11155068 chr3R 11155123 11155171 5 102 0.5 0.5 0.5 3.3 151 chr3R 11155020 intron Ugt86Dc + chr3R 11155096 intron Ugt86Dc + chr3R 11155171 intron Ugt86Dc + chr3R_5_11155001 chr3R_11155001 RAL-57 1716 chr3R 10916983 10917010 chr3R 11156352 11156378 4 239368 19.5 6.5 13.0 0.3 239395 chr3R 10916983 intergenic not near genes chr3R 11036680 intron CG34114 + chr3R 11156378 exon Ugt86Dc + chr3R_4_11035001 chr3R_11035001 RAL-57 1717 chr3R 11197963 11197995 chr3R 11198087 11198116 6 124 1.5 4.5 3.0 1.5 153 chr3R 11197963 intron cu + chr3R 11198040 intron cu + chr3R 11198116 intron cu + chr3R_6_11195001 chr3R_11195001 RAL-57 1718 chr3R 11257636 11257829 chr3R 21907534 21907535 4 10649808 30.5 22.5 26.5 0.1 10649899 chr3R 11257636 intergenic not near genes chr3R 16582586 intron Scp2 - chr3R 21907535 intergenic CG6678 + chr3R_4_16580001 chr3R_16580001 RAL-57 1719 chr3R 11307187 11307223 chr3R 11307288 11307315 10 101 1.5 3.5 2.5 2.9 128 chr3R 11307187 intergenic not near genes chr3R 11307251 intergenic not near genes chr3R 11307315 intergenic not near genes chr3R_10_11305001 chr3R_11305001 RAL-57 1720 chr3R 11330290 11330300 chr3R 11330924 11330934 5 634 13.0 1.0 7.0 0.6 644 chr3R 11330290 intron pros + chr3R 11330612 intron pros + chr3R 11330934 intron pros + chr3R_5_11330001 chr3R_11330001 RAL-57 1721 chr3R 11342516 11342573 chr3R 11342617 11342648 30 100 10.0 9.5 9.8 2.8 132 chr3R 11342516 intron pros + chr3R 11342582 intron pros + chr3R 11342648 intron pros + chr3R_30_11340001 chr3R_11340001 RAL-57 1722 chr3R 11354087 11354136 chr3R 11354343 11354392 13 255 2.5 3.5 3.0 3.2 305 chr3R 11354087 intron pros + chr3R 11354240 intron pros + chr3R 11354392 intron pros + chr3R_13_11350001 chr3R_11350001 RAL-57 1723 chr3R 11379213 11379253 chr3R 11388392 11388433 roo 23 9179 12.5 7.5 10.0 2.1 9220 chr3R 11379213 intron pros + chr3R 11383823 intron pros + chr3R 11388433 intron pros + chr3R_23_11380001 chr3R_11380001 RAL-57 1724 chr3R 11465662 11465722 chr3R 11465846 11465904 43 181 11.5 12.0 11.8 3.4 242 chr3R 11465662 intergenic CG17230 + chr3R 11465783 intergenic CG17230 + chr3R 11465904 intergenic CG17230 + chr3R_43_11465001 chr3R_11465001 RAL-57 1725 chr3R 11518799 11518843 chr3R 11518915 11518958 18 112 5.0 9.5 7.2 2.2 159 chr3R 11518799 intergenic not near genes chr3R 11518878 intergenic not near genes chr3R 11518958 intergenic not near genes chr3R_18_11515001 chr3R_11515001 RAL-57 1726 chr3R 11643332 11643381 chr3R 11643627 11643664 15 292 5.0 6.0 5.5 2.3 332 chr3R 11643332 intron Csk - chr3R 11643498 intron Csk - chr3R 11643664 intron Csk - chr3R_15_11640001 chr3R_11640001 RAL-57 1727 chr3R 11694706 11694733 chr3R 11694824 11694851 9 118 3.0 0.0 1.5 3.6 145 chr3R 11694706 intergenic Fer3 - chr3R 11694778 intergenic Fer3 - chr3R 11694851 intergenic not near genes chr3R_9_11690001 chr3R_11690001 RAL-57 1728 chr3R 11708606 11708655 chr3R 11708839 11708888 12 233 4.5 1.0 2.8 3.2 282 chr3R 11708606 intergenic not near genes chr3R 11708747 intergenic not near genes chr3R 11708888 intergenic not near genes chr3R_12_11705001 chr3R_11705001 RAL-57 1729 chr3R 11882635 11882659 chr3R 11882769 11882793 5 133 12.0 12.0 12.0 0.4 158 chr3R 11882635 intergenic CG6962 -,CG31368 + chr3R 11882714 intergenic CG31368 +,CG6962 - chr3R 11882793 5` UTR CG31368 + chr3R_5_11880001 chr3R_11880001 RAL-57 1730 chr3R 11920976 11920998 chr3R 11921071 11921098 5 112 1.0 1.5 1.2 2.3 122 chr3R 11920976 intron Cad87A - chr3R 11921037 intron Cad87A - chr3R 11921098 intron Cad87A - chr3R_5_11920001 chr3R_11920001 RAL-57 1731 chr3R 11949229 11949287 chr3R 11949628 11949686 42 394 5.0 11.5 8.2 4.6 457 chr3R 11949229 intergenic Cad87A -,CG31211 + chr3R 11949458 intergenic CG31211 +,Cad87A - chr3R 11949686 5` UTR CG31211 + chr3R_42_11945001 chr3R_11945001 RAL-57 1732 chr3R 11957830 11957869 chr3R 11958138 11958162 S-element 10 303 4.5 0.5 2.5 2.9 332 chr3R 11957830 intergenic not near genes chr3R 11957996 intergenic not near genes chr3R 11958162 intergenic not near genes chr3R_10_11955001 chr3R_11955001 RAL-57 1733 chr3R 12080839 12080897 chr3R 12080941 12080998 46 100 7.0 8.5 7.8 5.2 159 chr3R 12080839 intron CG14741 - chr3R 12080918 intron CG14741 - chr3R 12080998 intron CG14741 - chr3R_46_12080001 chr3R_12080001 RAL-57 1734 chr3R 12165839 12165895 chr3R 12165942 12165998 30 103 8.0 8.0 8.0 3.3 159 chr3R 12165839 intron Cpn - chr3R 12165918 intron Cpn - chr3R 12165998 intron Cpn - chr3R_30_12165001 chr3R_12165001 RAL-57 1735 chr3R 12202291 12202319 chr3R 12202424 12202439 7 131 2.0 6.0 4.0 1.4 148 chr3R 12202291 intergenic not near genes chr3R 12202365 intergenic not near genes chr3R 12202439 intergenic not near genes chr3R_7_12200001 chr3R_12200001 RAL-57 1736 chr3R 12267838 12267883 chr3R 12267943 12267988 7 105 0.0 1.5 0.8 3.9 150 chr3R 12267838 intron svp + chr3R 12267913 intron svp + chr3R 12267988 intron svp + chr3R_7_12265001 chr3R_12265001 RAL-57 1737 chr3R 12344121 12344139 chr3R 12344223 12344238 4 101 0.5 0.5 0.5 2.7 117 chr3R 12344121 intergenic not near genes chr3R 12344180 intergenic not near genes chr3R 12344238 intergenic not near genes chr3R_4_12340001 chr3R_12340001 RAL-57 1738 chr3R 12392882 12392900 chr3R 12392993 12393004 6 117 5.5 10.5 8.0 0.7 122 chr3R 12392882 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392943 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393004 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_6_12390001 chr3R_12390001 RAL-57 1739 chr3R 12548964 12549015 chr3R 12549128 12549177 16 163 1.5 3.5 2.5 4.6 213 chr3R 12548964 intergenic not near genes chr3R 12549070 intergenic not near genes chr3R 12549177 intergenic not near genes chr3R_16_12545001 chr3R_12545001 RAL-57 1740 chr3R 12555448 12555469 chr3R 12555524 12555554 8 90 4.0 2.0 3.0 2.0 106 chr3R 12555448 intron Octbeta2R - chr3R 12555501 intron Octbeta2R - chr3R 12555554 intron Octbeta2R - chr3R_8_12555001 chr3R_12555001 RAL-57 1741 chr3R 12566749 12566805 chr3R 12566940 12566971 13 184 3.0 4.5 3.8 2.7 222 chr3R 12566749 intron Octbeta2R - chr3R 12566860 intron Octbeta2R - chr3R 12566971 intron Octbeta2R - chr3R_13_12565001 chr3R_12565001 RAL-57 1742 chr3R 10451877 10451877 chr3R 12722496 12722496 4 2270619 13.5 25.5 19.5 0.2 2270619 chr3R 10451877 intergenic not near genes chr3R 11587186 exon CG6791 - chr3R 12722496 intergenic Men - chr3R_4_11585001 chr3R_11585001 RAL-57 1743 chr3R 12724301 12724356 chr3R 12724769 12724824 32 467 4.0 7.0 5.5 4.9 523 chr3R 12724301 intergenic not near genes chr3R 12724562 intergenic not near genes chr3R 12724824 intergenic not near genes chr3R_32_12720001 chr3R_12720001 RAL-57 1744 chr3R 12725966 12725970 chr3R 12726047 12726071 9 100 7.0 8.5 7.8 1.0 105 chr3R 12725966 intergenic not near genes chr3R 12726018 intergenic not near genes chr3R 12726071 intergenic not near genes chr3R_9_12725001 chr3R_12725001 RAL-57 1745 chr3R 12733458 12733468 chr3R 12733559 12733570 6 100 5.5 5.0 5.2 1.0 112 chr3R 12733458 intergenic not near genes chr3R 12733514 intergenic not near genes chr3R 12733570 intergenic not near genes chr3R_6_12730001 chr3R_12730001 RAL-57 1746 chr3R 12733469 12733508 chr3R 12733551 12733563 9 90 3.0 3.5 3.2 2.1 94 chr3R 12733469 intergenic not near genes chr3R 12733516 intergenic not near genes chr3R 12733563 intergenic not near genes chr3R_9_12730001 chr3R_12730001 RAL-57 1747 chr3R 12787928 12787950 chr3R 12788036 12788058 5 108 0.0 2.5 1.2 2.3 130 chr3R 12787928 intergenic not near genes chr3R 12787993 intergenic not near genes chr3R 12788058 intergenic not near genes chr3R_5_12785001 chr3R_12785001 RAL-57 1748 chr3R 12804806 12804812 chr3R 12805189 12805194 4 391 1.5 0.5 1.0 2.0 388 chr3R 12804806 intergenic not near genes chr3R 12805000 intergenic not near genes chr3R 12805194 intergenic not near genes chr3R_4_12805001 chr3R_12805001 RAL-57 1749 chr3R 12819003 12819043 chr3R 12819111 12819151 6 108 4.0 0.5 2.2 1.9 148 chr3R 12819003 intergenic not near genes chr3R 12819077 intergenic not near genes chr3R 12819151 intergenic not near genes chr3R_6_12815001 chr3R_12815001 RAL-57 1750 chr3R 12866462 12866517 chr3R 12866638 12866688 10 175 0.0 2.5 1.2 4.5 226 chr3R 12866462 intergenic not near genes chr3R 12866575 intergenic not near genes chr3R 12866688 intergenic not near genes chr3R_10_12865001 chr3R_12865001 RAL-57 1751 chr3R 12920131 12920169 chr3R 12925359 12925397 copia 7 5228 2.0 2.5 2.2 2.2 5266 chr3R 12920131 intron beat-Vb + chr3R 12922764 intron beat-Vb + chr3R 12925397 intron beat-Vb + chr3R_7_12920001 chr3R_12920001 RAL-57 1752 chr3R 13026987 13027036 chr3R 13027093 13027111 28 105 12.0 13.5 12.8 2.0 124 chr3R 13026987 3` UTR CG12360 - chr3R 13027049 3` UTR CG12360 - chr3R 13027111 3` UTR CG12360 - chr3R_28_13025001 chr3R_13025001 RAL-57 1753 chr3R 13059936 13059976 chr3R 13060156 13060194 16 217 4.5 4.5 4.5 2.9 258 chr3R 13059936 intron sim + chr3R 13060065 intron sim + chr3R 13060194 intron sim + chr3R_16_13060001 chr3R_13060001 RAL-57 1754 chr3R 13061854 13061912 chr3R 13061974 13062032 26 120 8.0 3.0 5.5 4.0 178 chr3R 13061854 intron sim + chr3R 13061943 intron sim + chr3R 13062032 intron sim + chr3R_26_13060001 chr3R_13060001 RAL-57 1755 chr3R 13066985 13067009 chr3R 13067097 13067121 8 112 1.5 3.5 2.5 2.3 136 chr3R 13066985 intron sim + chr3R 13067053 intron sim + chr3R 13067121 intron sim + chr3R_8_13065001 chr3R_13065001 RAL-57 1756 chr3R 13075333 13075371 chr3R 13075439 13075477 13 106 8.5 3.0 5.8 1.9 144 chr3R 13075333 intron sim + chr3R 13075405 intron sim + chr3R 13075477 intron sim + chr3R_13_13075001 chr3R_13075001 RAL-57 1757 chr3R 13120773 13120788 chr3R 13120868 13120890 6 100 1.5 2.5 2.0 2.0 117 chr3R 13120773 intron timeout + chr3R 13120832 intron timeout + chr3R 13120890 intron timeout + chr3R_6_13120001 chr3R_13120001 RAL-57 1758 chr3R 13135804 13135858 chr3R 13138004 13138058 pogo 10 2200 3.0 2.5 2.8 2.6 2254 chr3R 13135804 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136931 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138058 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_10_13135001 chr3R_13135001 RAL-57 1759 chr3R 13143054 13143060 chr3R 13148629 13148662 mdg3 4 5590 3.0 4.0 3.5 0.9 5608 chr3R 13143054 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145858 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148662 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-57 1760 chr3R 13172766 13172793 chr3R 13172887 13172914 6 120 2.0 2.5 2.2 1.9 148 chr3R 13172766 intergenic not near genes chr3R 13172840 intergenic not near genes chr3R 13172914 intergenic not near genes chr3R_6_13170001 chr3R_13170001 RAL-57 1761 chr3R 13174530 13174553 chr3R 13174632 13174654 4 101 5.0 4.0 4.5 0.7 124 chr3R 13174530 intergenic not near genes chr3R 13174592 intergenic not near genes chr3R 13174654 intergenic not near genes chr3R_4_13170001 chr3R_13170001 RAL-57 1762 chr3R 13195942 13195983 chr3R 13196045 13196103 8 117 1.5 0.0 0.8 4.4 161 chr3R 13195942 intergenic not near genes chr3R 13196022 intergenic not near genes chr3R 13196103 intergenic not near genes chr3R_8_13195001 chr3R_13195001 RAL-57 1763 chr3R 13205387 13205435 chr3R 13205493 13205541 11 105 1.5 1.0 1.2 5.0 154 chr3R 13205387 intergenic not near genes chr3R 13205464 intergenic not near genes chr3R 13205541 intergenic not near genes chr3R_11_13205001 chr3R_13205001 RAL-57 1764 chr3R 13249589 13249593 chr3R 13249728 13249732 5 139 10.5 3.5 7.0 0.6 143 chr3R 13249589 intron Ace - chr3R 13249660 intron Ace - chr3R 13249732 intron Ace - chr3R_5_13245001 chr3R_13245001 RAL-57 1765 chr3R 13274193 13274241 chr3R 13274296 13274345 6 102 3.0 2.5 2.8 1.6 152 chr3R 13274193 intergenic not near genes chr3R 13274269 intergenic not near genes chr3R 13274345 intergenic not near genes chr3R_6_13270001 chr3R_13270001 RAL-57 1766 chr3R 13276992 13277013 chr3R 13277104 13277127 4 114 3.5 5.0 4.2 0.8 135 chr3R 13276992 intergenic not near genes chr3R 13277060 intergenic not near genes chr3R 13277127 intergenic not near genes chr3R_4_13275001 chr3R_13275001 RAL-57 1767 chr3R 13348997 13349012 chr3R 13349098 13349113 4 101 1.0 2.5 1.8 1.4 116 chr3R 13348997 intergenic not near genes chr3R 13349055 intergenic not near genes chr3R 13349113 intergenic not near genes chr3R_4_13345001 chr3R_13345001 RAL-57 1768 chr3R 13376259 13376300 chr3R 13376373 13376414 9 107 1.5 3.0 2.2 2.8 155 chr3R 13376259 intron CG9813 - chr3R 13376336 intron CG9813 - chr3R 13376414 intron CG9813 - chr3R_9_13375001 chr3R_13375001 RAL-57 1769 chr3R 13380700 13380750 chr3R 13380810 13380863 17 113 2.5 6.5 4.5 3.1 163 chr3R 13380700 exon CG8870 + chr3R 13380782 exon CG8870 + chr3R 13380863 intron CG8870 + chr3R_17_13380001 chr3R_13380001 RAL-57 1770 chr3R 13418641 13418667 chr3R 13418742 13418768 4 101 3.5 1.0 2.2 1.2 127 chr3R 13418641 intergenic not near genes chr3R 13418704 intergenic not near genes chr3R 13418768 intergenic not near genes chr3R_4_13415001 chr3R_13415001 RAL-57 1771 chr3R 13496609 13496660 chr3R 13496713 13496764 12 104 4.0 3.0 3.5 2.7 155 chr3R 13496609 intergenic not near genes chr3R 13496686 intergenic not near genes chr3R 13496764 intergenic not near genes chr3R_12_13495001 chr3R_13495001 RAL-57 1772 chr3R 13505843 13505852 chr3R 13505943 13505952 6 101 9.0 3.5 6.2 0.8 109 chr3R 13505843 intergenic not near genes chr3R 13505898 intergenic not near genes chr3R 13505952 intergenic not near genes chr3R_6_13505001 chr3R_13505001 RAL-57 1773 chr3R 13505857 13505864 chr3R 13505957 13505965 4 100 6.5 4.5 5.5 0.6 108 chr3R 13505857 intergenic not near genes chr3R 13505911 intergenic not near genes chr3R 13505965 intergenic not near genes chr3R_4_13505001 chr3R_13505001 RAL-57 1774 chr3R 13517241 13517257 chr3R 13520082 13520099 jockey 9 2842 4.5 2.5 3.5 2.0 2858 chr3R 13517241 intergenic not near genes chr3R 13518670 intergenic not near genes chr3R 13520099 intergenic not near genes chr3R_9_13515001 chr3R_13515001 RAL-57 1775 chr3R 13556968 13557014 chr3R 13557068 13557115 36 101 8.5 9.0 8.8 3.7 147 chr3R 13556968 intergenic not near genes chr3R 13557042 intergenic not near genes chr3R 13557115 intergenic not near genes chr3R_36_13555001 chr3R_13555001 RAL-57 1776 chr3R 13575679 13575725 chr3R 13575996 13576041 5 316 3.0 1.5 2.2 1.6 362 chr3R 13575679 intergenic CR43848 + chr3R 13575860 intergenic CR43848 + chr3R 13576041 intergenic not near genes chr3R_5_13575001 chr3R_13575001 RAL-57 1777 chr3R 13598070 13598109 chr3R 13598168 13598211 8 102 2.5 1.0 1.8 2.9 141 chr3R 13598070 intergenic not near genes chr3R 13598140 intergenic not near genes chr3R 13598211 intergenic not near genes chr3R_8_13595001 chr3R_13595001 RAL-57 1778 chr3R 13603034 13603077 chr3R 13603148 13603193 15 116 3.5 7.5 5.5 2.3 159 chr3R 13603034 intergenic not near genes chr3R 13603114 intergenic not near genes chr3R 13603193 intergenic not near genes chr3R_15_13600001 chr3R_13600001 RAL-57 1779 chr3R 13672914 13672971 chr3R 13673017 13673073 45 102 8.0 10.0 9.0 4.5 159 chr3R 13672914 intron Task6 - chr3R 13672994 intron Task6 - chr3R 13673073 intron Task6 - chr3R_45_13670001 chr3R_13670001 RAL-57 1780 chr3R 13693026 13693030 chr3R 21907534 21907536 75 8214507 28.5 22.5 25.5 2.8 8214510 chr3R 13693026 3` UTR flfl + chr3R 17800281 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_75_17800001 chr3R_17800001 RAL-57 1781 chr3R 13796611 13796814 chr3R 21907534 21907536 4 8110779 36.0 22.5 29.2 0.1 8110925 chr3R 13796611 intergenic not near genes chr3R 17852074 5` UTR tinc + chr3R 21907536 intergenic CG6678 + chr3R_4_17850001 chr3R_17850001 RAL-57 1782 chr3R 13994282 13994323 chr3R 13994562 13994603 6 280 2.0 2.5 2.2 1.9 321 chr3R 13994282 intron rdx - chr3R 13994442 intron rdx - chr3R 13994603 intron rdx - chr3R_6_13990001 chr3R_13990001 RAL-57 1783 chr3R 14021623 14021680 chr3R 14023464 14023522 S-element 12 1841 6.5 1.0 3.8 2.5 1899 chr3R 14021623 intron rdx - chr3R 14022572 intron rdx - chr3R 14023522 intron rdx - chr3R_12_14020001 chr3R_14020001 RAL-57 1784 chr3R 14037560 14037587 chr3R 14037666 14037690 8 103 8.0 7.0 7.5 0.9 130 chr3R 14037560 intergenic not near genes chr3R 14037625 intergenic not near genes chr3R 14037690 intergenic not near genes chr3R_8_14035001 chr3R_14035001 RAL-57 1785 chr3R 14049001 14049033 chr3R 14049106 14049138 5 104 3.5 1.5 2.5 1.4 137 chr3R 14049001 intergenic not near genes chr3R 14049070 intergenic not near genes chr3R 14049138 intergenic not near genes chr3R_5_14045001 chr3R_14045001 RAL-57 1786 chr3R 14062096 14062143 chr3R 14062209 14062256 4 113 0.0 2.0 1.0 2.0 160 chr3R 14062096 intron foxo + chr3R 14062176 intron foxo + chr3R 14062256 intron foxo + chr3R_4_14060001 chr3R_14060001 RAL-57 1787 chr3R 14062823 14062869 chr3R 14062925 14062971 15 101 3.0 2.0 2.5 4.3 148 chr3R 14062823 intron foxo + chr3R 14062897 intron foxo + chr3R 14062971 intron foxo + chr3R_15_14060001 chr3R_14060001 RAL-57 1788 chr3R 14070104 14070145 chr3R 14070209 14070251 17 103 6.5 6.0 6.2 2.4 147 chr3R 14070104 intron foxo + chr3R 14070178 intron foxo + chr3R 14070251 intron foxo + chr3R_17_14070001 chr3R_14070001 RAL-57 1789 chr3R 14083391 14083415 chr3R 14083517 14083541 6 126 5.5 0.0 2.8 1.6 150 chr3R 14083391 intron foxo + chr3R 14083466 intron foxo + chr3R 14083541 intron foxo + chr3R_6_14080001 chr3R_14080001 RAL-57 1790 chr3R 14117419 14117465 chr3R 14117520 14117566 12 100 7.5 4.0 5.8 1.8 147 chr3R 14117419 intron Kif19A - chr3R 14117492 intron Kif19A - chr3R 14117566 intron Kif19A - chr3R_12_14115001 chr3R_14115001 RAL-57 1791 chr3R 14132433 14132447 chr3R 14132571 14132585 6 138 0.0 6.0 3.0 1.5 152 chr3R 14132433 intergenic CG14356 - chr3R 14132509 intergenic CG14356 - chr3R 14132585 intergenic not near genes chr3R_6_14130001 chr3R_14130001 RAL-57 1792 chr3R 14180786 14180845 chr3R 14185576 14185633 F-element 15 4787 2.5 2.5 2.5 4.3 4847 chr3R 14180786 intron Dop1R1 - chr3R 14183210 intron Dop1R1 - chr3R 14185633 intron Dop1R1 - chr3R_15_14180001 chr3R_14180001 RAL-57 1793 chr3R 14193594 14193626 chr3R 14193910 14193931 4 313 0.5 1.5 1.0 2.0 337 chr3R 14193594 intron Dop1R1 - chr3R 14193762 intron Dop1R1 - chr3R 14193931 intron Dop1R1 - chr3R_4_14190001 chr3R_14190001 RAL-57 1794 chr3R 14217397 14217456 chr3R 14217498 14217556 28 98 6.5 5.5 6.0 4.0 159 chr3R 14217397 intron CG9649 - chr3R 14217476 intron CG9649 - chr3R 14217556 exon CG9649 - chr3R_28_14215001 chr3R_14215001 RAL-57 1795 chr3R 14246391 14246406 chr3R 14247890 14247927 jockey 5 1513 10.5 4.5 7.5 0.6 1536 chr3R 14246391 intergenic not near genes chr3R 14247159 intergenic not near genes chr3R 14247927 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-57 1796 chr3R 14246409 14246417 chr3R 14247886 14247900 jockey 6 1502 8.5 3.5 6.0 0.9 1491 chr3R 14246409 intergenic not near genes chr3R 14247154 intergenic not near genes chr3R 14247900 intergenic not near genes chr3R_6_14245001 chr3R_14245001 RAL-57 1797 chr3R 14258189 14258214 chr3R 14258274 14258302 6 98 0.5 7.5 4.0 1.2 113 chr3R 14258189 intron Aats-met - chr3R 14258246 intron Aats-met - chr3R 14258302 intron Aats-met - chr3R_6_14255001 chr3R_14255001 RAL-57 1798 chr3R 14283581 14283687 chr3R 21907534 21907534 4 7623913 14.0 22.5 18.2 0.2 7623953 chr3R 14283581 intron trx - chr3R 18095558 intron sr + chr3R 21907534 intergenic CG6678 + chr3R_4_18095001 chr3R_18095001 RAL-57 1799 chr3R 14389323 14389334 chr3R 14389427 14389437 6 104 8.5 0.0 4.2 1.2 114 chr3R 14389323 intergenic not near genes chr3R 14389380 intergenic not near genes chr3R 14389437 intergenic not near genes chr3R_6_14385001 chr3R_14385001 RAL-57 1800 chr3R 14440704 14440754 chr3R 14440805 14440855 4 101 1.0 2.0 1.5 1.6 151 chr3R 14440704 intron cv-c - chr3R 14440780 intron cv-c - chr3R 14440855 intron cv-c - chr3R_4_14440001 chr3R_14440001 RAL-57 1801 chr3R 14514458 14514501 chr3R 14514568 14514611 22 110 5.5 8.0 6.8 2.8 153 chr3R 14514458 3` UTR Pde6 - chr3R 14514534 3` UTR Pde6 - chr3R 14514611 3` UTR Pde6 - chr3R_22_14510001 chr3R_14510001 RAL-57 1802 chr3R 14527378 14527400 chr3R 14527480 14527499 13 100 12.5 8.5 10.5 1.1 121 chr3R 14527378 intron Pde6 - chr3R 14527438 intron Pde6 - chr3R 14527499 intron Pde6 - chr3R_13_14525001 chr3R_14525001 RAL-57 1803 chr3R 14527403 14527414 chr3R 14527479 14527516 10 98 11.0 8.5 9.8 0.9 113 chr3R 14527403 intron Pde6 - chr3R 14527460 intron Pde6 - chr3R 14527516 intron Pde6 - chr3R_10_14525001 chr3R_14525001 RAL-57 1804 chr3R 14608449 14608475 chr3R 14608566 14608592 5 117 4.5 7.0 5.8 0.7 143 chr3R 14608449 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608592 intergenic not near genes chr3R_5_14605001 chr3R_14605001 RAL-57 1805 chr3R 14824557 14824571 chr3R 14824668 14824682 9 111 1.5 4.0 2.8 2.4 125 chr3R 14824557 intron btsz - chr3R 14824620 intron btsz - chr3R 14824682 intron btsz - chr3R_9_14820001 chr3R_14820001 RAL-57 1806 chr3R 14853280 14853333 chr3R 14853669 14853722 5 388 0.5 3.5 2.0 1.7 442 chr3R 14853280 intron btsz - chr3R 14853501 intron btsz - chr3R 14853722 intron btsz - chr3R_5_14850001 chr3R_14850001 RAL-57 1807 chr3R 14869845 14869893 chr3R 14869957 14870008 8 115 2.0 2.0 2.0 2.7 163 chr3R 14869845 intron btsz - chr3R 14869926 intron btsz - chr3R 14870008 intron btsz - chr3R_8_14865001 chr3R_14865001 RAL-57 1808 chr3R 14898450 14898502 chr3R 14898595 14898647 25 145 11.5 6.5 9.0 2.5 197 chr3R 14898450 intergenic Nup93-2 -,CG3817 + chr3R 14898548 intergenic Nup93-2 -,CG3817 + chr3R 14898647 intergenic CG3817 +,Nup93-2 - chr3R_25_14895001 chr3R_14895001 RAL-57 1809 chr3R 15059255 15059477 chr3R 15059474 15059589 BS 13 228 0.0 0.0 0.0 13.0 334 chr3R 15059255 intron dpr9 - chr3R 15059422 intron dpr9 - chr3R 15059589 intron dpr9 - chr3R_13_15055001 chr3R_15055001 RAL-57 1810 chr3R 15079791 15079836 chr3R 15080056 15080100 pogo 12 266 7.0 4.5 5.8 1.8 309 chr3R 15079791 3` UTR CG6966 - chr3R 15079946 3` UTR CG6966 - chr3R 15080100 3` UTR CG6966 - chr3R_12_15075001 chr3R_15075001 RAL-57 1811 chr3R 15102475 15102524 chr3R 15109755 15109804 412 16 7280 5.0 6.0 5.5 2.5 7329 chr3R 15102475 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109804 intron CG42788 - chr3R_16_15105001 chr3R_15105001 RAL-57 1812 chr3R 15114911 15114924 chr3R 15115013 15115026 5 102 2.0 3.5 2.8 1.3 115 chr3R 15114911 intron CG42788 - chr3R 15114968 intron CG42788 - chr3R 15115026 intron CG42788 - chr3R_5_15110001 chr3R_15110001 RAL-57 1813 chr3R 15132042 15132074 chr3R 15135127 15135159 Juan 10 3085 8.0 8.0 8.0 1.1 3117 chr3R 15132042 intergenic CG42788 - chr3R 15133600 intergenic not near genes chr3R 15135159 3` UTR CG6912 - chr3R_10_15130001 chr3R_15130001 RAL-57 1814 chr3R 15162527 15162562 chr3R 15167317 15167354 F-element 6 4792 4.5 1.5 3.0 1.5 4827 chr3R 15162527 intron Gyc88E + chr3R 15164940 intron Gyc88E + chr3R 15167354 intron Gyc88E + chr3R_6_15160001 chr3R_15160001 RAL-57 1815 chr3R 15167785 15167836 chr3R 15167967 15168018 7 181 2.0 3.0 2.5 2.0 233 chr3R 15167785 intron Gyc88E + chr3R 15167902 intron Gyc88E + chr3R 15168018 intron Gyc88E + chr3R_7_15165001 chr3R_15165001 RAL-57 1816 chr3R 15190628 15190678 chr3R 15190778 15190828 17 150 3.0 2.0 2.5 4.9 200 chr3R 15190628 3` UTR Gyc88E + chr3R 15190728 3` UTR Gyc88E + chr3R 15190828 3` UTR Gyc88E + chr3R_17_15190001 chr3R_15190001 RAL-57 1817 chr3R 15286986 15286987 chr3R 21907534 21907536 18 6620548 21.5 22.5 22.0 0.8 6620550 chr3R 15286986 intron Tm1 + chr3R 18597261 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_18_18595001 chr3R_18595001 RAL-57 1818 chr3R 15286988 15286989 chr3R 21907534 21907534 27 6620547 21.5 22.5 22.0 1.2 6620546 chr3R 15286988 intron Tm1 + chr3R 18597261 intron,exon qin +,CG14304 - chr3R 21907534 intergenic CG6678 + chr3R_27_18595001 chr3R_18595001 RAL-57 1819 chr3R 15302205 15302240 chr3R 15302316 15302320 8 107 11.0 8.0 9.5 0.8 115 chr3R 15302205 intron Tm1 + chr3R 15302262 intron Tm1 + chr3R 15302320 intron Tm1 + chr3R_8_15300001 chr3R_15300001 RAL-57 1820 chr3R 15320369 15320422 chr3R 15320637 15320690 24 267 6.5 5.0 5.8 3.5 321 chr3R 15320369 intergenic CG44040 +,CG6276 -,ear + chr3R 15320530 exon CG44040 + chr3R 15320690 3` UTR CG44040 + chr3R_24_15320001 chr3R_15320001 RAL-57 1821 chr3R 15445885 15445904 chr3R 15445995 15446014 14 110 6.0 2.5 4.2 2.7 129 chr3R 15445885 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446014 intron AdamTS-A - chr3R_14_15445001 chr3R_15445001 RAL-57 1822 chr3R 15470963 15470976 chr3R 15471066 15471079 6 103 10.0 2.5 6.2 0.8 116 chr3R 15470963 intron AdamTS-A - chr3R 15471021 intron AdamTS-A - chr3R 15471079 intron AdamTS-A - chr3R_6_15470001 chr3R_15470001 RAL-57 1823 chr3R 15470977 15471009 chr3R 15471064 15471112 12 97 5.0 1.5 3.2 2.9 135 chr3R 15470977 intron AdamTS-A - chr3R 15471044 intron AdamTS-A - chr3R 15471112 intron AdamTS-A - chr3R_12_15470001 chr3R_15470001 RAL-57 1824 chr3R 15504153 15504191 chr3R 15504261 15504306 5 114 3.0 0.5 1.8 1.8 153 chr3R 15504153 intergenic not near genes chr3R 15504230 intergenic not near genes chr3R 15504306 intergenic not near genes chr3R_5_15500001 chr3R_15500001 RAL-57 1825 chr3R 15601145 15601195 chr3R 15608692 15608742 412 7 7546 1.5 3.0 2.2 2.2 7597 chr3R 15601145 intergenic not near genes chr3R 15604944 intergenic not near genes chr3R 15608742 intergenic not near genes chr3R_7_15600001 chr3R_15600001 RAL-57 1826 chr3R 15635183 15635234 chr3R 15635309 15635360 4 126 0.5 2.0 1.2 1.8 177 chr3R 15635183 intergenic CG43335 + chr3R 15635272 intergenic CG43335 + chr3R 15635360 intergenic CG43335 + chr3R_4_15635001 chr3R_15635001 RAL-57 1827 chr3R 15644107 15644133 chr3R 15644196 15644211 4 90 3.0 3.5 3.2 1.0 104 chr3R 15644107 intergenic not near genes chr3R 15644159 intergenic not near genes chr3R 15644211 intergenic not near genes chr3R_4_15640001 chr3R_15640001 RAL-57 1828 chr3R 15691164 15691325 chr3R 15691292 15691437 10 122 0.0 0.0 0.0 10.0 273 chr3R 15691164 intergenic not near genes chr3R 15691300 intergenic not near genes chr3R 15691437 intergenic not near genes chr3R_10_15690001 chr3R_15690001 RAL-57 1829 chr3R 15735220 15735228 chr3R 15739965 15739973 F-element 4 4745 1.0 2.5 1.8 1.4 4753 chr3R 15735220 intergenic not near genes chr3R 15737596 intergenic not near genes chr3R 15739973 intergenic not near genes chr3R_4_15735001 chr3R_15735001 RAL-57 1830 chr3R 15813306 15813357 chr3R 15813415 15813467 10 108 1.5 1.5 1.5 4.0 161 chr3R 15813306 intron alpha-Man-IIb + chr3R 15813386 intron alpha-Man-IIb + chr3R 15813467 intron alpha-Man-IIb + chr3R_10_15810001 chr3R_15810001 RAL-57 1831 chr3R 15891644 15891687 chr3R 15892061 15892070 6 411 3.0 2.0 2.5 1.7 426 chr3R 15891644 intron CG14877 - chr3R 15891857 intron CG14877 - chr3R 15892070 intron CG14877 - chr3R_6_15890001 chr3R_15890001 RAL-57 1832 chr3R 15892639 15892680 chr3R 15892745 15892786 10 106 6.0 3.0 4.5 1.8 147 chr3R 15892639 intron CG14877 - chr3R 15892712 intron CG14877 - chr3R 15892786 intron CG14877 - chr3R_10_15890001 chr3R_15890001 RAL-57 1833 chr3R 15938821 15938879 chr3R 15938924 15938982 14 101 3.5 3.5 3.5 3.1 161 chr3R 15938821 intron Sap47 + chr3R 15938902 intron Sap47 + chr3R 15938982 intron Sap47 + chr3R_14_15935001 chr3R_15935001 RAL-57 1834 chr3R 16011026 16011071 chr3R 16011159 16011215 14 138 6.5 0.5 3.5 3.1 189 chr3R 16011026 intron GATAe + chr3R 16011120 intron GATAe + chr3R 16011215 intron GATAe + chr3R_14_16010001 chr3R_16010001 RAL-57 1835 chr3R 16225062 16225119 chr3R 16225172 16225229 32 110 7.0 5.5 6.2 4.4 167 chr3R 16225062 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225229 intergenic tara + chr3R_32_16225001 chr3R_16225001 RAL-57 1836 chr3R 16238474 16238529 chr3R 16238577 16238632 37 102 7.5 10.5 9.0 3.7 158 chr3R 16238474 intron tara + chr3R 16238553 intron tara + chr3R 16238632 intron tara + chr3R_37_16235001 chr3R_16235001 RAL-57 1837 chr3R 16246545 16246553 chr3R 16246632 16246654 5 98 2.0 19.0 10.5 0.4 109 chr3R 16246545 intron tara + chr3R 16246600 intron tara + chr3R 16246654 intron tara + chr3R_5_16245001 chr3R_16245001 RAL-57 1838 chr3R 16253510 16253569 chr3R 16253621 16253679 8 110 0.0 4.0 2.0 2.7 169 chr3R 16253510 intron tara + chr3R 16253594 intron tara + chr3R 16253679 intron tara + chr3R_8_16250001 chr3R_16250001 RAL-57 1839 chr3R 16285225 16285276 chr3R 16285320 16285376 15 93 1.5 2.5 2.0 5.0 151 chr3R 16285225 intron gish + chr3R 16285300 intron gish + chr3R 16285376 intron gish + chr3R_15_16285001 chr3R_16285001 RAL-57 1840 chr3R 16374275 16374327 chr3R 16374417 16374469 13 142 6.5 4.0 5.2 2.1 194 chr3R 16374275 intergenic ss - chr3R 16374372 intergenic ss - chr3R 16374469 3` UTR ss - chr3R_13_16370001 chr3R_16370001 RAL-57 1841 chr3R 16578124 16578178 chr3R 16578477 16578531 6 353 2.0 5.5 3.8 1.2 407 chr3R 16578124 intron Scp2 - chr3R 16578328 intron Scp2 - chr3R 16578531 intron Scp2 - chr3R_6_16575001 chr3R_16575001 RAL-57 1842 chr3R 16582883 16582918 chr3R 16582986 16583022 15 99 13.0 11.5 12.2 1.1 139 chr3R 16582883 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16583022 intron Scp2 - chr3R_15_16580001 chr3R_16580001 RAL-57 1843 chr3R 16594728 16594783 chr3R 16594831 16594861 29 91 7.5 6.5 7.0 3.6 133 chr3R 16594728 5` UTR CG14892 + chr3R 16594794 5` UTR CG14892 + chr3R 16594861 5` UTR CG14892 + chr3R_29_16590001 chr3R_16590001 RAL-57 1844 chr3R 16731909 16731914 chr3R 16732015 16732018 4 105 12.0 1.0 6.5 0.5 109 chr3R 16731909 intron Ubx - chr3R 16731964 intron Ubx - chr3R 16732018 intron Ubx - chr3R_4_16730001 chr3R_16730001 RAL-57 1845 chr3R 16731931 16731940 chr3R 16732010 16732045 4 98 5.5 1.0 3.2 1.0 114 chr3R 16731931 intron Ubx - chr3R 16731988 intron Ubx - chr3R 16732045 intron Ubx - chr3R_4_16730001 chr3R_16730001 RAL-57 1846 chr3R 16756298 16756331 chr3R 16762514 16762545 diver 6 6216 4.0 2.5 3.2 1.4 6247 chr3R 16756298 intron bxd - chr3R 16759422 intron bxd - chr3R 16762545 intron bxd - chr3R_6_16755001 chr3R_16755001 RAL-57 1847 chr3R 16845130 16845152 chr3R 16845243 16845265 5 113 9.0 6.0 7.5 0.6 135 chr3R 16845130 intron iab-8 - chr3R 16845198 intron iab-8 - chr3R 16845265 intron iab-8 - chr3R_5_16845001 chr3R_16845001 RAL-57 1848 chr3R 16845161 16845169 chr3R 16845274 16845282 6 113 6.0 13.0 9.5 0.6 121 chr3R 16845161 intron iab-8 - chr3R 16845222 intron iab-8 - chr3R 16845282 intron iab-8 - chr3R_6_16845001 chr3R_16845001 RAL-57 1849 chr3R 16860317 16860353 chr3R 16860420 16860456 4 103 1.0 0.0 0.5 2.7 139 chr3R 16860317 intron iab-8 - chr3R 16860386 intron iab-8 - chr3R 16860456 intron iab-8 - chr3R_4_16860001 chr3R_16860001 RAL-57 1850 chr3R 17027619 17027633 chr3R 17030944 17030975 12 3328 53.0 32.0 42.5 0.3 3356 chr3R 17027619 intron Pxd + chr3R 17029297 exon CG5225 + chr3R 17030975 intergenic CG5225 + chr3R_12_17025001 chr3R_17025001 RAL-57 1851 chr3R 17120490 17120525 chr3R 17120733 17120775 7 249 3.0 6.0 4.5 1.3 285 chr3R 17120490 intron,exon cher -,CG34278 + chr3R 17120632 intron,exon cher -,CG34278 + chr3R 17120775 intron,3` UTR cher -,CG34278 + chr3R_7_17120001 chr3R_17120001 RAL-57 1852 chr3R 17121499 17121554 chr3R 17121719 17121765 15 219 4.5 2.0 3.2 3.6 266 chr3R 17121499 intron cher - chr3R 17121632 intron,exon cher -,CG42779 + chr3R 17121765 intron,exon cher -,CG42779 + chr3R_15_17120001 chr3R_17120001 RAL-57 1853 chr3R 17208841 17208847 chr3R 17208942 17208947 7 101 16.5 0.0 8.2 0.8 106 chr3R 17208841 intergenic not near genes chr3R 17208894 intergenic not near genes chr3R 17208947 intergenic not near genes chr3R_7_17205001 chr3R_17205001 RAL-57 1854 chr3R 17209683 17209693 chr3R 17209796 17209806 8 113 18.0 17.5 17.8 0.4 123 chr3R 17209683 intergenic not near genes chr3R 17209744 intergenic not near genes chr3R 17209806 intergenic not near genes chr3R_8_17205001 chr3R_17205001 RAL-57 1855 chr3R 17268652 17268699 chr3R 17268799 17268846 14 147 4.5 8.0 6.2 1.9 194 chr3R 17268652 intergenic not near genes chr3R 17268749 intergenic not near genes chr3R 17268846 intergenic not near genes chr3R_14_17265001 chr3R_17265001 RAL-57 1856 chr3R 17273954 17273999 chr3R 17274076 17274131 17 131 2.5 2.5 2.5 4.9 177 chr3R 17273954 intergenic not near genes chr3R 17274042 intergenic not near genes chr3R 17274131 intergenic not near genes chr3R_17_17270001 chr3R_17270001 RAL-57 1857 chr3R 17294648 17294701 chr3R 17295100 17295158 BS 7 455 4.0 0.0 2.0 2.3 510 chr3R 17294648 intergenic not near genes chr3R 17294903 intergenic not near genes chr3R 17295158 intergenic not near genes chr3R_7_17290001 chr3R_17290001 RAL-57 1858 chr3R 17346686 17346710 chr3R 17348274 17348298 F-element 5 1588 0.5 3.0 1.8 1.8 1612 chr3R 17346686 intron beat-IIa - chr3R 17347492 intron beat-IIa - chr3R 17348298 intron beat-IIa - chr3R_5_17345001 chr3R_17345001 RAL-57 1859 chr3R 17351817 17351863 chr3R 17351922 17351968 9 105 3.0 2.0 2.5 2.6 151 chr3R 17351817 intron beat-IIa - chr3R 17351892 intron beat-IIa - chr3R 17351968 intron beat-IIa - chr3R_9_17350001 chr3R_17350001 RAL-57 1860 chr3R 17355471 17355523 chr3R 17355573 17355620 13 98 3.0 1.5 2.2 4.1 149 chr3R 17355471 intron beat-IIa - chr3R 17355546 intron beat-IIa - chr3R 17355620 intron beat-IIa - chr3R_13_17355001 chr3R_17355001 RAL-57 1861 chr3R 17359737 17359769 chr3R 17359930 17359961 5 191 4.5 1.5 3.0 1.2 224 chr3R 17359737 intron beat-IIa - chr3R 17359849 intron beat-IIa - chr3R 17359961 intron beat-IIa - chr3R_5_17355001 chr3R_17355001 RAL-57 1862 chr3R 17371391 17371426 chr3R 17371477 17371486 6 77 7.0 6.5 6.8 0.8 95 chr3R 17371391 3` UTR CR44256 - chr3R 17371438 3` UTR CR44256 - chr3R 17371486 3` UTR CR44256 - chr3R_6_17370001 chr3R_17370001 RAL-57 1863 chr3R 17406982 17407012 chr3R 17407109 17407139 8 125 4.5 5.5 5.0 1.3 157 chr3R 17406982 intron CG42798 + chr3R 17407060 5` UTR CG42798 + chr3R 17407139 exon CG42798 + chr3R_8_17405001 chr3R_17405001 RAL-57 1864 chr3R 17415785 17415838 chr3R 17415895 17415948 22 109 4.5 6.5 5.5 3.4 163 chr3R 17415785 exon CG5866 + chr3R 17415866 exon CG5866 + chr3R 17415948 exon CG5866 + chr3R_22_17415001 chr3R_17415001 RAL-57 1865 chr3R 17423862 17423902 chr3R 17423982 17424023 6 121 4.0 4.5 4.2 1.2 161 chr3R 17423862 intergenic not near genes chr3R 17423942 intergenic not near genes chr3R 17424023 intergenic not near genes chr3R_6_17420001 chr3R_17420001 RAL-57 1866 chr3R 17436416 17436416 chr3R 21907534 21907536 5 4471119 26.5 22.5 24.5 0.2 4471120 chr3R 17436416 intron CG5873 + chr3R 19671976 intron Naam + chr3R 21907536 intergenic CG6678 + chr3R_5_19670001 chr3R_19670001 RAL-57 1867 chr3R 17467593 17467606 chr3R 17467729 17467741 5 136 1.5 2.0 1.8 1.8 148 chr3R 17467593 intergenic not near genes chr3R 17467667 intergenic not near genes chr3R 17467741 intergenic not near genes chr3R_5_17465001 chr3R_17465001 RAL-57 1868 chr3R 17497940 17497993 chr3R 17498051 17498104 25 111 8.5 10.5 9.5 2.4 164 chr3R 17497940 intron Dscam3 - chr3R 17498022 intron Dscam3 - chr3R 17498104 intron Dscam3 - chr3R_25_17495001 chr3R_17495001 RAL-57 1869 chr3R 17521579 17521587 chr3R 17521719 17521772 17 164 4.0 9.5 6.8 2.2 193 chr3R 17521579 intergenic not near genes chr3R 17521676 intergenic not near genes chr3R 17521772 intergenic not near genes chr3R_17_17520001 chr3R_17520001 RAL-57 1870 chr3R 17522197 17522204 chr3R 17522309 17522319 6 114 13.5 0.0 6.8 0.8 122 chr3R 17522197 intergenic not near genes chr3R 17522258 intergenic not near genes chr3R 17522319 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-57 1871 chr3R 17624956 17624970 chr3R 17625057 17625071 8 101 3.5 5.0 4.2 1.5 115 chr3R 17624956 intergenic AttD + chr3R 17625014 intergenic AttD + chr3R 17625071 intergenic AttD + chr3R_8_17625001 chr3R_17625001 RAL-57 1872 chr3R 17638313 17638338 chr3R 17638807 17638849 roo 4 507 0.0 1.5 0.8 2.2 536 chr3R 17638313 intron CG43175 + chr3R 17638581 intron CG43175 + chr3R 17638849 intron,intron CG43175 +,CR45222 + chr3R_4_17635001 chr3R_17635001 RAL-57 1873 chr3R 17773350 17773389 chr3R 17773470 17773509 26 119 4.5 16.0 10.2 2.3 159 chr3R 17773350 exon CG43102 - chr3R 17773430 intron CG43102 - chr3R 17773509 exon CG43102 - chr3R_26_17770001 chr3R_17770001 RAL-57 1874 chr3R 17817046 17817091 chr3R 17817192 17817237 4 146 0.5 1.5 1.0 2.0 191 chr3R 17817046 intron tinc + chr3R 17817142 intron tinc + chr3R 17817237 intron tinc + chr3R_4_17815001 chr3R_17815001 RAL-57 1875 chr3R 17826743 17826799 chr3R 17827098 17827155 19 352 0.5 5.5 3.0 4.8 412 chr3R 17826743 intron tinc + chr3R 17826949 intron tinc + chr3R 17827155 intron tinc + chr3R_19_17825001 chr3R_17825001 RAL-57 1876 chr3R 17881866 17881887 chr3R 17881982 17881990 8 115 16.5 0.0 8.2 0.9 124 chr3R 17881866 exon Rim - chr3R 17881928 intron Rim - chr3R 17881990 intron Rim - chr3R_8_17880001 chr3R_17880001 RAL-57 1877 chr3R 17895346 17895373 chr3R 17895462 17895489 20 116 9.5 11.0 10.2 1.8 143 chr3R 17895346 intron Rim - chr3R 17895418 intron Rim - chr3R 17895489 intron Rim - chr3R_20_17895001 chr3R_17895001 RAL-57 1878 chr3R 17901316 17901319 chr3R 17901391 17901399 5 88 11.0 26.5 18.8 0.3 83 chr3R 17901316 intron Rim - chr3R 17901358 intron Rim - chr3R 17901399 intron Rim - chr3R_5_17900001 chr3R_17900001 RAL-57 1879 chr3R 17925853 17925879 chr3R 17927319 17927351 hobo 6 1482 2.5 5.0 3.8 1.2 1498 chr3R 17925853 intron cpo + chr3R 17926602 intron cpo + chr3R 17927351 intron cpo + chr3R_6_17925001 chr3R_17925001 RAL-57 1880 chr3R 17935058 17935097 chr3R 17935159 17935198 10 98 1.5 3.0 2.2 3.1 140 chr3R 17935058 intron cpo + chr3R 17935128 intron cpo + chr3R 17935198 intron cpo + chr3R_10_17935001 chr3R_17935001 RAL-57 1881 chr3R 18061580 18061603 chr3R 18063173 18063195 F-element 4 1593 1.0 1.5 1.2 1.8 1615 chr3R 18061580 intergenic not near genes chr3R 18062388 intergenic not near genes chr3R 18063195 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-57 1882 chr3R 18126183 18126230 chr3R 18126287 18126334 21 104 12.5 9.5 11.0 1.8 151 chr3R 18126183 intron sr + chr3R 18126258 intron sr + chr3R 18126334 intron sr + chr3R_21_18125001 chr3R_18125001 RAL-57 1883 chr3R 18322830 18322838 chr3R 18322954 18322960 4 123 5.0 1.5 3.2 1.0 130 chr3R 18322830 intron CG31235 - chr3R 18322895 intron CG31235 - chr3R 18322960 intron CG31235 - chr3R_4_18320001 chr3R_18320001 RAL-57 1884 chr3R 18322841 18322868 chr3R 18322949 18322992 5 120 3.0 1.5 2.2 1.6 151 chr3R 18322841 intron CG31235 - chr3R 18322916 intron CG31235 - chr3R 18322992 intron CG31235 - chr3R_5_18320001 chr3R_18320001 RAL-57 1885 chr3R 18472259 18472290 chr3R 18472385 18472416 6 126 3.0 4.0 3.5 1.3 157 chr3R 18472259 intron fru - chr3R 18472338 intron fru - chr3R 18472416 intron fru - chr3R_6_18470001 chr3R_18470001 RAL-57 1886 chr3R 18473232 18473236 chr3R 18473344 18473348 4 112 5.0 0.0 2.5 1.1 116 chr3R 18473232 intron fru - chr3R 18473290 intron fru - chr3R 18473348 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-57 1887 chr3R 18498170 18498182 chr3R 18498271 18498283 4 101 6.0 4.5 5.2 0.6 113 chr3R 18498170 intron fru - chr3R 18498226 intron fru - chr3R 18498283 intron fru - chr3R_4_18495001 chr3R_18495001 RAL-57 1888 chr3R 18501572 18501623 chr3R 18501678 18501728 18 106 5.5 5.0 5.2 2.9 156 chr3R 18501572 intron fru - chr3R 18501650 intron fru - chr3R 18501728 intron fru - chr3R_18_18500001 chr3R_18500001 RAL-57 1889 chr3R 18703261 18703288 chr3R 18703394 18703421 15 133 9.0 0.5 4.8 2.6 160 chr3R 18703261 intergenic not near genes chr3R 18703341 intergenic not near genes chr3R 18703421 intergenic not near genes chr3R_15_18700001 chr3R_18700001 RAL-57 1890 chr3R 18711124 18711142 chr3R 18711299 18711313 8 174 14.5 5.0 9.8 0.7 189 chr3R 18711124 intron,intron Cha +,VAChT + chr3R 18711218 intron,intron Cha +,VAChT + chr3R 18711313 intron,intron Cha +,VAChT + chr3R_8_18710001 chr3R_18710001 RAL-57 1891 chr3R 18730000 18730038 chr3R 18730101 18730115 28 97 14.0 14.0 14.0 1.9 115 chr3R 18730000 exon Cha + chr3R 18730058 intron Cha + chr3R 18730115 exon Cha + chr3R_28_18730001 chr3R_18730001 RAL-57 1892 chr3R 18782745 18782769 chr3R 18782863 18782888 4 118 1.5 4.0 2.8 1.1 143 chr3R 18782745 intron CG7720 - chr3R 18782816 intron CG7720 - chr3R 18782888 intron CG7720 - chr3R_4_18780001 chr3R_18780001 RAL-57 1893 chr3R 18792819 18792834 chr3R 18792927 18792942 7 108 2.5 0.0 1.2 3.2 123 chr3R 18792819 intron CG7720 - chr3R 18792880 intron CG7720 - chr3R 18792942 intron CG7720 - chr3R_7_18790001 chr3R_18790001 RAL-57 1894 chr3R 18807304 18807334 chr3R 18807405 18807435 17 99 10.5 0.0 5.2 2.7 131 chr3R 18807304 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807435 intron CG18208 - chr3R_17_18805001 chr3R_18805001 RAL-57 1895 chr3R 18812064 18812098 chr3R 18812167 18812200 7 103 2.0 3.0 2.5 2.0 136 chr3R 18812064 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812200 intron CG18208 - chr3R_7_18810001 chr3R_18810001 RAL-57 1896 chr3R 18887577 18887588 chr3R 18887683 18887694 8 106 14.0 6.0 10.0 0.7 117 chr3R 18887577 intergenic not near genes chr3R 18887636 intergenic not near genes chr3R 18887694 intergenic not near genes chr3R_8_18885001 chr3R_18885001 RAL-57 1897 chr3R 18963801 18963857 chr3R 18964216 18964272 8 414 0.5 1.5 1.0 4.0 471 chr3R 18963801 intron,intron CG42613 +,CG43732 + chr3R 18964036 intron,intron CG42613 +,CG43732 + chr3R 18964272 intron,intron CG42613 +,CG43732 + chr3R_8_18960001 chr3R_18960001 RAL-57 1898 chr3R 18966345 18966355 chr3R 18966409 18966460 13 84 7.0 4.5 5.8 1.9 115 chr3R 18966345 intron,intron CG42613 +,CG43732 + chr3R 18966402 intron,intron CG42613 +,CG43732 + chr3R 18966460 intron,intron CG42613 +,CG43732 + chr3R_13_18965001 chr3R_18965001 RAL-57 1899 chr3R 19078097 19078149 chr3R 19078213 19078262 7 116 2.0 5.0 3.5 1.6 165 chr3R 19078097 intron cdi - chr3R 19078180 intron cdi - chr3R 19078262 intron cdi - chr3R_7_19075001 chr3R_19075001 RAL-57 1900 chr3R 19140242 19140301 chr3R 19140715 19140754 21 467 6.5 7.0 6.8 2.7 512 chr3R 19140242 3` UTR Ppcs - chr3R 19140498 3` UTR Ppcs - chr3R 19140754 3` UTR Ppcs - chr3R_21_19140001 chr3R_19140001 RAL-57 1901 chr3R 19206100 19206148 chr3R 19206343 19206390 18 243 5.0 2.5 3.8 3.8 290 chr3R 19206100 intergenic not near genes chr3R 19206245 intergenic not near genes chr3R 19206390 intergenic not near genes chr3R_18_19205001 chr3R_19205001 RAL-57 1902 chr3R 19290521 19290576 chr3R 19290622 19290677 11 101 3.5 1.5 2.5 3.1 156 chr3R 19290521 intergenic not near genes chr3R 19290599 intergenic not near genes chr3R 19290677 intergenic not near genes chr3R_11_19290001 chr3R_19290001 RAL-57 1903 chr3R 19340382 19340426 chr3R 19340484 19340528 5 102 1.0 2.0 1.5 2.0 146 chr3R 19340382 intergenic not near genes chr3R 19340455 intergenic not near genes chr3R 19340528 intergenic not near genes chr3R_5_19340001 chr3R_19340001 RAL-57 1904 chr3R 19490418 19490442 chr3R 19490532 19490556 4 114 5.0 2.0 3.5 0.9 138 chr3R 19490418 intron,exon Dys +,CG15025 - chr3R 19490487 intron,intron Dys +,CG15025 - chr3R 19490556 intron,intron Dys +,CG15025 - chr3R_4_19490001 chr3R_19490001 RAL-57 1905 chr3R 19494389 19494404 chr3R 19494493 19494509 4 105 1.5 0.0 0.8 2.2 120 chr3R 19494389 intron Dys + chr3R 19494449 intron Dys + chr3R 19494509 intron Dys + chr3R_4_19490001 chr3R_19490001 RAL-57 1906 chr3R 19505914 19505968 chr3R 19506038 19506090 44 123 9.5 8.0 8.8 4.5 176 chr3R 19505914 exon Dys + chr3R 19506002 intron Dys + chr3R 19506090 intron Dys + chr3R_44_19505001 chr3R_19505001 RAL-57 1907 chr3R 19590622 19590647 chr3R 19590739 19590764 19 116 5.5 16.5 11.0 1.6 142 chr3R 19590622 exon Dys + chr3R 19590693 intron Dys + chr3R 19590764 exon Dys + chr3R_19_19590001 chr3R_19590001 RAL-57 1908 chr3R 19591512 19591551 chr3R 19591618 19591656 6 106 3.0 8.0 5.5 0.9 144 chr3R 19591512 intron Dys + chr3R 19591584 intron Dys + chr3R 19591656 intron Dys + chr3R_6_19590001 chr3R_19590001 RAL-57 1909 chr3R 19593481 19593516 chr3R 19593591 19593612 30 108 19.0 12.5 15.8 1.8 131 chr3R 19593481 intron Dys + chr3R 19593546 intron Dys + chr3R 19593612 intron Dys + chr3R_30_19590001 chr3R_19590001 RAL-57 1910 chr3R 19602747 19602777 chr3R 19602847 19602880 4 102 1.0 3.0 2.0 1.3 133 chr3R 19602747 intergenic CG7333 + chr3R 19602814 intergenic CG7333 + chr3R 19602880 intergenic CG7333 +,CG7342 + chr3R_4_19600001 chr3R_19600001 RAL-57 1911 chr3R 19702319 19702349 chr3R 19702418 19702451 8 105 4.5 5.0 4.8 1.4 132 chr3R 19702319 intergenic not near genes chr3R 19702385 intergenic not near genes chr3R 19702451 intergenic not near genes chr3R_8_19700001 chr3R_19700001 RAL-57 1912 chr3R 19763903 19763947 chr3R 19764016 19764060 5 113 0.0 0.0 0.0 5.0 157 chr3R 19763903 intron GluClalpha + chr3R 19763982 intron GluClalpha + chr3R 19764060 intron GluClalpha + chr3R_5_19760001 chr3R_19760001 RAL-57 1913 chr3R 19950013 19950060 chr3R 19950115 19950163 4 96 1.0 0.5 0.8 2.2 150 chr3R 19950013 intron Hs6st - chr3R 19950088 intron Hs6st - chr3R 19950163 intron Hs6st - chr3R_4_19950001 chr3R_19950001 RAL-57 1914 chr3R 20060605 20060657 chr3R 20060713 20060765 8 107 2.5 2.0 2.2 2.5 160 chr3R 20060605 intergenic not near genes chr3R 20060685 intergenic not near genes chr3R 20060765 intergenic not near genes chr3R_8_20060001 chr3R_20060001 RAL-57 1915 chr3R 20096155 20096182 chr3R 20096275 20096303 6 118 2.0 1.0 1.5 2.4 148 chr3R 20096155 intergenic not near genes chr3R 20096229 intergenic not near genes chr3R 20096303 intergenic not near genes chr3R_6_20095001 chr3R_20095001 RAL-57 1916 chr3R 20156674 20156719 chr3R 20165869 20165914 roo 4 9195 1.5 2.5 2.0 1.3 9240 chr3R 20156674 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165914 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-57 1917 chr3R 20209781 20209831 chr3R 20209892 20209942 15 111 5.0 4.0 4.5 2.7 161 chr3R 20209781 intron,5` UTR Nlg4 +,CG17199 - chr3R 20209862 intron Nlg4 + chr3R 20209942 intron Nlg4 + chr3R_15_20205001 chr3R_20205001 RAL-57 1918 chr3R 20245249 20245301 chr3R 20248887 20248937 F-element 14 3636 5.0 3.0 4.0 2.8 3688 chr3R 20245249 3` UTR Nlg4 + chr3R 20247093 intergenic not near genes chr3R 20248937 intergenic not near genes chr3R_14_20245001 chr3R_20245001 RAL-57 1919 chr3R 20266501 20266528 chr3R 20272996 20273024 Burdock 7 6496 0.5 5.0 2.8 1.8 6523 chr3R 20266501 intron cic + chr3R 20269762 intron cic + chr3R 20273024 intron cic + chr3R_7_20265001 chr3R_20265001 RAL-57 1920 chr3R 20330976 20331016 chr3R 20331487 20331527 roo 7 511 5.5 4.5 5.0 1.2 551 chr3R 20330976 intergenic Sirt2 + chr3R 20331252 intergenic Sirt2 + chr3R 20331527 intergenic not near genes chr3R_7_20330001 chr3R_20330001 RAL-57 1921 chr3R 20421514 20421533 chr3R 20421618 20421639 6 105 5.5 1.0 3.2 1.4 125 chr3R 20421514 intron Gfrl - chr3R 20421576 intron Gfrl - chr3R 20421639 intron Gfrl - chr3R_6_20420001 chr3R_20420001 RAL-57 1922 chr3R 20421543 20421562 chr3R 20421649 20421666 5 105 1.5 4.0 2.8 1.3 123 chr3R 20421543 intron Gfrl - chr3R 20421604 intron Gfrl - chr3R 20421666 intron Gfrl - chr3R_5_20420001 chr3R_20420001 RAL-57 1923 chr3R 20428877 20428927 chr3R 20428984 20429005 18 97 6.5 7.5 7.0 2.2 128 chr3R 20428877 intron Gfrl - chr3R 20428941 intron Gfrl - chr3R 20429005 intron Gfrl - chr3R_18_20425001 chr3R_20425001 RAL-57 1924 chr3R 20482396 20482451 chr3R 20482512 20482549 14 112 0.0 3.5 1.8 5.0 153 chr3R 20482396 intron Gfrl - chr3R 20482472 intron Gfrl - chr3R 20482549 intron Gfrl - chr3R_14_20480001 chr3R_20480001 RAL-57 1925 chr3R 20512981 20513032 chr3R 20515709 20515760 opus 10 2728 3.0 0.0 1.5 4.0 2779 chr3R 20512981 intergenic not near genes chr3R 20514370 intergenic not near genes chr3R 20515760 intergenic not near genes chr3R_10_20510001 chr3R_20510001 RAL-57 1926 chr3R 20545985 20546005 chr3R 20546068 20546115 5 105 1.5 5.5 3.5 1.1 130 chr3R 20545985 intron Stat92E - chr3R 20546050 intron Stat92E - chr3R 20546115 intron Stat92E - chr3R_5_20545001 chr3R_20545001 RAL-57 1927 chr3R 20592684 20592747 chr3R 20592794 20592856 26 109 5.5 6.0 5.8 3.8 172 chr3R 20592684 intergenic CG4159 -,bon + chr3R 20592770 intergenic CG4159 -,bon + chr3R 20592856 intergenic CG4159 -,bon + chr3R_26_20590001 chr3R_20590001 RAL-57 1928 chr3R 20594472 20594477 chr3R 20594586 20594592 5 115 10.0 0.0 5.0 0.8 120 chr3R 20594472 intron bon + chr3R 20594532 intron bon + chr3R 20594592 intron bon + chr3R_5_20590001 chr3R_20590001 RAL-57 1929 chr3R 20594479 20594500 chr3R 20594585 20594615 7 113 8.0 0.0 4.0 1.4 136 chr3R 20594479 intron bon + chr3R 20594547 intron bon + chr3R 20594615 intron bon + chr3R_7_20590001 chr3R_20590001 RAL-57 1930 chr3R 20597844 20597869 chr3R 20597996 20598020 10 149 32.0 13.0 22.5 0.4 176 chr3R 20597844 intron bon + chr3R 20597932 intron bon + chr3R 20598020 intron bon + chr3R_10_20595001 chr3R_20595001 RAL-57 1931 chr3R 20597876 20597888 chr3R 20597994 20597999 8 132 23.5 13.0 18.2 0.4 123 chr3R 20597876 intron bon + chr3R 20597938 intron bon + chr3R 20597999 intron bon + chr3R_8_20595001 chr3R_20595001 RAL-57 1932 chr3R 20689401 20689456 chr3R 20689692 20689747 34 291 10.0 7.5 8.8 3.5 346 chr3R 20689401 3` UTR Oamb - chr3R 20689574 3` UTR Oamb - chr3R 20689747 3` UTR Oamb - chr3R_34_20685001 chr3R_20685001 RAL-57 1933 chr3R 20769559 20769734 chr3R 20769709 20769851 15 135 0.0 0.0 0.0 15.0 292 chr3R 20769559 intron Syp + chr3R 20769705 intron Syp + chr3R 20769851 intron Syp + chr3R_15_20765001 chr3R_20765001 RAL-57 1934 chr3R 20771708 20771727 chr3R 20771796 20771833 4 90 0.0 7.5 3.8 0.8 125 chr3R 20771708 intron,intron Syp +,Takl1 - chr3R 20771770 intron,intron Syp +,Takl1 - chr3R 20771833 intron,exon Syp +,Takl1 - chr3R_4_20770001 chr3R_20770001 RAL-57 1935 chr3R 20787421 20787451 chr3R 20787535 20787566 8 115 0.0 5.0 2.5 2.3 145 chr3R 20787421 intron Syp + chr3R 20787494 intron Syp + chr3R 20787566 intron Syp + chr3R_8_20785001 chr3R_20785001 RAL-57 1936 chr3R 20841735 20841741 chr3R 20868569 20868576 Doc 4 26835 9.0 16.0 12.5 0.3 26841 chr3R 20841735 intergenic CG15695 + chr3R 20855156 intron Ir93a - chr3R 20868576 intergenic not near genes chr3R_4_20855001 chr3R_20855001 RAL-57 1937 chr3R 20848340 20848353 chr3R 20848455 20848468 4 115 2.0 6.0 4.0 0.8 128 chr3R 20848340 intergenic not near genes chr3R 20848404 intergenic not near genes chr3R 20848468 intergenic not near genes chr3R_4_20845001 chr3R_20845001 RAL-57 1938 chr3R 20850063 20850088 chr3R 20850173 20850198 5 110 0.0 3.5 1.8 1.8 135 chr3R 20850063 intergenic RpS30 + chr3R 20850130 intergenic RpS30 + chr3R 20850198 intergenic RpS30 + chr3R_5_20850001 chr3R_20850001 RAL-57 1939 chr3R 20854446 20854512 chr3R 20859266 20859309 Doc 4 4798 1.5 4.0 2.8 1.1 4863 chr3R 20854446 intron Ir93a - chr3R 20856878 intron Ir93a - chr3R 20859309 exon Ir93a - chr3R_4_20855001 chr3R_20855001 RAL-57 1940 chr3R 20870235 20870283 chr3R 20870344 20870391 10 109 2.5 1.5 2.0 3.3 156 chr3R 20870235 intergenic not near genes chr3R 20870313 intergenic not near genes chr3R 20870391 intergenic not near genes chr3R_10_20870001 chr3R_20870001 RAL-57 1941 chr3R 20936062 20936102 chr3R 20936164 20936204 5 102 1.0 0.5 0.8 2.8 142 chr3R 20936062 intron CG31191 - chr3R 20936133 intron CG31191 - chr3R 20936204 intron CG31191 - chr3R_5_20935001 chr3R_20935001 RAL-57 1942 chr3R 20971773 20971784 chr3R 20971886 20971898 5 113 3.5 6.5 5.0 0.8 125 chr3R 20971773 intron Atpalpha + chr3R 20971836 intron Atpalpha + chr3R 20971898 intron Atpalpha + chr3R_5_20970001 chr3R_20970001 RAL-57 1943 chr3R 21108208 21108235 chr3R 21108325 21108352 4 117 0.0 7.5 3.8 0.8 144 chr3R 21108208 intergenic Sec15 -,rtet + chr3R 21108280 intergenic rtet +,Sec15 - chr3R 21108352 intergenic rtet +,Sec15 - chr3R_4_21105001 chr3R_21105001 RAL-57 1944 chr3R 21132608 21132645 chr3R 21132716 21132754 9 109 0.5 0.0 0.2 7.5 146 chr3R 21132608 3` UTR Ice2 + chr3R 21132681 3` UTR Ice2 + chr3R 21132754 exon CG7009 - chr3R_9_21130001 chr3R_21130001 RAL-57 1945 chr3R 21141665 21141669 chr3R 21150156 21150172 Tirant 4 8494 8.0 6.5 7.2 0.5 8507 chr3R 21141665 intron SNF4Agamma + chr3R 21145918 intron SNF4Agamma + chr3R 21150172 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-57 1946 chr3R 21141670 21141706 chr3R 21150154 21150210 Tirant 9 8493 2.5 6.0 4.2 1.7 8540 chr3R 21141670 intron SNF4Agamma + chr3R 21145940 intron SNF4Agamma + chr3R 21150210 intron SNF4Agamma + chr3R_9_21145001 chr3R_21145001 RAL-57 1947 chr3R 21155744 21155757 chr3R 21155864 21155877 5 120 8.0 8.0 8.0 0.6 133 chr3R 21155744 intron SNF4Agamma + chr3R 21155810 intron SNF4Agamma + chr3R 21155877 intron SNF4Agamma + chr3R_5_21155001 chr3R_21155001 RAL-57 1948 chr3R 21159089 21159137 chr3R 21159217 21159265 19 128 6.0 1.0 3.5 4.2 176 chr3R 21159089 intron SNF4Agamma + chr3R 21159177 intron SNF4Agamma + chr3R 21159265 intron,3` UTR SNF4Agamma +,CG10824 - chr3R_19_21155001 chr3R_21155001 RAL-57 1949 chr3R 21183247 21183254 chr3R 21183350 21183356 4 103 0.0 8.0 4.0 0.8 109 chr3R 21183247 intron SNF4Agamma + chr3R 21183302 intron SNF4Agamma + chr3R 21183356 intron SNF4Agamma + chr3R_4_21180001 chr3R_21180001 RAL-57 1950 chr3R 21189671 21189722 chr3R 21189773 21189825 4 103 1.5 0.5 1.0 2.0 154 chr3R 21189671 intron SNF4Agamma + chr3R 21189748 intron SNF4Agamma + chr3R 21189825 intron SNF4Agamma + chr3R_4_21185001 chr3R_21185001 RAL-57 1951 chr3R 21240428 21240473 chr3R 21240545 21240590 15 116 3.0 3.5 3.2 3.6 162 chr3R 21240428 intergenic not near genes chr3R 21240509 intergenic not near genes chr3R 21240590 intergenic not near genes chr3R_15_21240001 chr3R_21240001 RAL-57 1952 chr3R 21265460 21265513 chr3R 21265719 21265772 16 259 1.0 7.5 4.2 3.1 312 chr3R 21265460 intergenic ETHR + chr3R 21265616 intergenic Rab1 -,ETHR + chr3R 21265772 intergenic Rab1 - chr3R_16_21265001 chr3R_21265001 RAL-57 1953 chr3R 21295300 21295351 chr3R 21295422 21295473 18 121 4.5 5.0 4.8 3.1 173 chr3R 21295300 intergenic not near genes chr3R 21295386 intergenic not near genes chr3R 21295473 intergenic not near genes chr3R_18_21295001 chr3R_21295001 RAL-57 1954 chr3R 21471991 21472029 chr3R 21472097 21472135 13 104 12.5 8.5 10.5 1.1 144 chr3R 21471991 intergenic not near genes chr3R 21472063 intergenic not near genes chr3R 21472135 intergenic not near genes chr3R_13_21470001 chr3R_21470001 RAL-57 1955 chr3R 21502940 21502984 chr3R 21503111 21503155 32 170 9.5 1.0 5.2 5.2 215 chr3R 21502940 intron C15 + chr3R 21503048 intron C15 + chr3R 21503155 intron C15 + chr3R_32_21500001 chr3R_21500001 RAL-57 1956 chr3R 21540213 21540264 chr3R 21540443 21540494 9 229 1.5 2.5 2.0 3.0 281 chr3R 21540213 intergenic not near genes chr3R 21540354 intergenic not near genes chr3R 21540494 intergenic not near genes chr3R_9_21540001 chr3R_21540001 RAL-57 1957 chr3R 21624077 21624118 chr3R 21624196 21624237 25 119 10.5 6.0 8.2 2.7 160 chr3R 21624077 exon E2f - chr3R 21624157 intron E2f - chr3R 21624237 intron E2f - chr3R_25_21620001 chr3R_21620001 RAL-57 1958 chr3R 21725651 21725675 chr3R 21725812 21725836 8 161 0.0 5.5 2.8 2.1 185 chr3R 21725651 intergenic not near genes chr3R 21725744 intergenic not near genes chr3R 21725836 intergenic not near genes chr3R_8_21725001 chr3R_21725001 RAL-57 1959 chr3R 21751142 21751146 chr3R 21753915 21753936 7 2775 20.0 42.0 31.0 0.2 2794 chr3R 21751142 exon CG31233 + chr3R 21752539 exon CG31233 + chr3R 21753936 intergenic CG31198 + chr3R_7_21750001 chr3R_21750001 RAL-57 1960 chr3R 21759858 21759910 chr3R 21759990 21760019 15 104 4.5 4.5 4.5 2.7 161 chr3R 21759858 exon CG42335 + chr3R 21759938 exon CG42335 + chr3R 21760019 exon CG42335 + chr3R_15_21755001 chr3R_21755001 RAL-57 1961 chr3R 21761098 21761155 chr3R 21768514 21768542 mdg1 26 7408 4.5 11.0 7.8 3.0 7444 chr3R 21761098 exon CG42335 + chr3R 21764820 intron CG42335 + chr3R 21768542 exon CG42335 + chr3R_26_21760001 chr3R_21760001 RAL-57 1962 chr3R 21784848 21784857 chr3R 21784971 21784980 5 122 7.0 1.0 4.0 1.0 132 chr3R 21784848 3` UTR,3` UTR CASK -,CRG - chr3R 21784914 3` UTR,3` UTR CASK -,CRG - chr3R 21784980 3` UTR,3` UTR CASK -,CRG - chr3R_5_21780001 chr3R_21780001 RAL-57 1963 chr3R 21784858 21784880 chr3R 21784959 21784978 4 104 4.5 1.0 2.8 1.1 120 chr3R 21784858 3` UTR,3` UTR CASK -,CRG - chr3R 21784918 3` UTR,3` UTR CASK -,CRG - chr3R 21784978 3` UTR,3` UTR CASK -,CRG - chr3R_4_21780001 chr3R_21780001 RAL-57 1964 chr3R 21812539 21812555 chr3R 21812649 21812665 5 110 2.0 4.0 3.0 1.2 126 chr3R 21812539 intron CASK - chr3R 21812602 intron CASK - chr3R 21812665 intron CASK - chr3R_5_21810001 chr3R_21810001 RAL-57 1965 chr3R 21832768 21832797 chr3R 21832885 21832912 7 113 8.5 3.5 6.0 1.0 144 chr3R 21832768 exon Gr93a + chr3R 21832840 exon Gr93a + chr3R 21832912 exon Gr93a + chr3R_7_21830001 chr3R_21830001 RAL-57 1966 chr3R 8339246 8339247 chr3R 21907534 21907534 9 13568288 28.0 22.5 25.2 0.3 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-57 1967 chr3R 9620956 9620956 chr3R 21907534 21907534 6 12286578 26.0 22.5 24.2 0.2 12286578 chr3R 9620956 intron CG8312 + chr3R 15764245 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_6_15760001 chr3R_15760001 RAL-57 1968 chr3R 13693028 13693028 chr3R 21907534 21907534 4 8214506 28.5 22.5 25.5 0.2 8214506 chr3R 13693028 3` UTR flfl + chr3R 17800281 exon CG17803 - chr3R 21907534 intergenic CG6678 + chr3R_4_17800001 chr3R_17800001 RAL-57 1969 chr3R 17122371 17122563 chr3R 21907534 21907534 4 4785069 24.0 22.5 23.2 0.2 4785163 chr3R 17122371 intron cher - chr3R 19514952 intron Dys + chr3R 21907534 intergenic CG6678 + chr3R_4_19515001 chr3R_19515001 RAL-57 1970 chr3R 17389054 17389054 chr3R 21907534 21907534 14 4518480 22.5 22.5 22.5 0.6 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_14_19645001 chr3R_19645001 RAL-57 1971 chr3R 21337429 21337429 chr3R 21907534 21907534 9 570105 21.0 22.5 21.8 0.4 570105 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_9_21620001 chr3R_21620001 RAL-57 1972 chr3R 21907534 21907534 chr3R 24389465 24389465 5 2481931 21.5 28.0 24.8 0.2 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_5_23145001 chr3R_23145001 RAL-57 1973 chr3R 21907534 21907534 chr3R 26659332 26659337 21 4751800 21.5 51.5 36.5 0.6 4751803 chr3R 21907534 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_21_24280001 chr3R_24280001 RAL-57 1974 chr3R 21907534 21907534 chr3R 28831799 28831838 49 6924268 21.5 36.5 29.0 1.6 6924304 chr3R 21907534 intergenic CG6678 + chr3R 25369686 intron Fur1 - chr3R 28831838 5` UTR WASp - chr3R_49_25365001 chr3R_25365001 RAL-57 1975 chr3R 21907534 21907534 chr3R 29013339 29013352 9 7105807 21.5 15.0 18.2 0.5 7105818 chr3R 21907534 intergenic CG6678 + chr3R 25460443 intron Fur1 - chr3R 29013352 intron wat - chr3R_9_25460001 chr3R_25460001 RAL-57 1976 chr3R 21907534 21907534 chr3R 29089342 29089627 4 7181944 21.5 7.0 14.2 0.3 7182093 chr3R 21907534 intergenic CG6678 + chr3R 25498580 intergenic not near genes chr3R 29089627 intron CG11873 + chr3R_4_25495001 chr3R_25495001 RAL-57 1977 chr3R 4542412 4542548 chr3R 21907535 21907535 4 17365058 58.0 22.5 40.2 0.1 17365123 chr3R 4542412 intron,exon CG34357 -,Mur82C + chr3R 13224974 intron Ace - chr3R 21907535 intergenic CG6678 + chr3R_4_13225001 chr3R_13225001 RAL-57 1978 chr3R 6308127 6308404 chr3R 21907535 21907535 6 15599214 65.0 22.5 43.8 0.1 15599408 chr3R 6308127 exon CG31556 - chr3R 14107831 5` UTR CG12402 - chr3R 21907535 intergenic CG6678 + chr3R_6_14105001 chr3R_14105001 RAL-57 1979 chr3R 8339246 8339247 chr3R 21907535 21907535 11 13568288 28.0 22.5 25.2 0.4 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_11_15120001 chr3R_15120001 RAL-57 1980 chr3R 9620954 9620986 chr3R 21907535 21907535 16 12286578 28.0 22.5 25.2 0.6 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_16_15760001 chr3R_15760001 RAL-57 1981 chr3R 11631201 11631254 chr3R 21907535 21907535 4 10276316 39.5 22.5 31.0 0.1 10276334 chr3R 11631201 exon CG14712 + chr3R 16769368 intron bxd - chr3R 21907535 intergenic CG6678 + chr3R_4_16765001 chr3R_16765001 RAL-57 1982 chr3R 13693024 13693028 chr3R 21907535 21907535 6 8214508 28.5 22.5 25.5 0.2 8214511 chr3R 13693024 3` UTR flfl + chr3R 17800280 exon CG17803 - chr3R 21907535 intergenic CG6678 + chr3R_6_17800001 chr3R_17800001 RAL-57 1983 chr3R 15286984 15286988 chr3R 21907535 21907535 5 6620548 21.5 22.5 22.0 0.2 6620551 chr3R 15286984 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907535 intergenic CG6678 + chr3R_5_18595001 chr3R_18595001 RAL-57 1984 chr3R 17122371 17122372 chr3R 21907535 21907535 5 4785163 13.5 22.5 18.0 0.3 4785164 chr3R 17122371 intron cher - chr3R 19514953 intron Dys + chr3R 21907535 intergenic CG6678 + chr3R_5_19510001 chr3R_19510001 RAL-57 1985 chr3R 17389054 17389054 chr3R 21907535 21907535 8 4518481 22.5 22.5 22.5 0.3 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_8_19645001 chr3R_19645001 RAL-57 1986 chr3R 18130650 18130813 chr3R 21907535 21907535 4 3776771 105.5 22.5 64.0 0.1 3776885 chr3R 18130650 exon sr + chr3R 20019092 exon CG4433 - chr3R 21907535 intergenic CG6678 + chr3R_4_20015001 chr3R_20015001 RAL-57 1987 chr3R 20177845 20177845 chr3R 21907535 21907535 4 1729690 8.0 22.5 15.2 0.2 1729690 chr3R 20177845 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907535 intergenic CG6678 + chr3R_4_21040001 chr3R_21040001 RAL-57 1988 chr3R 21337428 21337429 chr3R 21907535 21907535 6 570106 21.0 22.5 21.8 0.3 570107 chr3R 21337428 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907535 intergenic CG6678 + chr3R_6_21620001 chr3R_21620001 RAL-57 1989 chr3R 21907535 21907535 chr3R 21980877 21980877 4 73342 21.5 5.0 13.2 0.3 73342 chr3R 21907535 intergenic CG6678 + chr3R 21944206 intergenic not near genes chr3R 21980877 intron Eip93F + chr3R_4_21940001 chr3R_21940001 RAL-57 1990 chr3R 21907535 21907535 chr3R 22075853 22076027 4 168439 21.5 36.5 29.0 0.1 168492 chr3R 21907535 intergenic CG6678 + chr3R 21991781 intron Eip93F + chr3R 22076027 intron how + chr3R_4_21990001 chr3R_21990001 RAL-57 1991 chr3R 21907535 21907535 chr3R 23886951 23887080 4 1979464 21.5 22.0 21.8 0.2 1979545 chr3R 21907535 intergenic CG6678 + chr3R 22897308 intergenic not near genes chr3R 23887080 intron Pli - chr3R_4_22895001 chr3R_22895001 RAL-57 1992 chr3R 21907535 21907535 chr3R 24181011 24181063 4 2273503 21.5 47.0 34.2 0.1 2273528 chr3R 21907535 intergenic CG6678 + chr3R 23044299 exon CG13837 + chr3R 24181063 intron CG13606 + chr3R_4_23040001 chr3R_23040001 RAL-57 1993 chr3R 21907535 21907535 chr3R 26659332 26659337 31 4751799 21.5 51.5 36.5 0.8 4751802 chr3R 21907535 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_31_24280001 chr3R_24280001 RAL-57 1994 chr3R 21907535 21907535 chr3R 26670318 26670352 4 4762792 21.5 31.0 26.2 0.1 4762817 chr3R 21907535 intergenic CG6678 + chr3R 24288944 exon CG34290 - chr3R 26670352 intron beat-VII - chr3R_4_24285001 chr3R_24285001 RAL-57 1995 chr3R 21907535 21907535 chr3R 28831801 28831805 74 6924267 21.5 35.5 28.5 2.5 6924270 chr3R 21907535 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831805 intron WASp - chr3R_74_25365001 chr3R_25365001 RAL-57 1996 chr3R 21907535 21907535 chr3R 29013337 29013340 24 7105804 21.5 15.5 18.5 1.2 7105805 chr3R 21907535 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_24_25460001 chr3R_25460001 RAL-57 1997 chr3R 21907535 21907535 chr3R 29089348 29089643 6 7182026 21.5 5.5 13.5 0.4 7182108 chr3R 21907535 intergenic CG6678 + chr3R 25498589 intergenic not near genes chr3R 29089643 intron CG11873 + chr3R_6_25495001 chr3R_25495001 RAL-57 1998 chr3R 21907535 21907535 chr3R 30642537 30642736 4 8735100 21.5 10.0 15.8 0.2 8735201 chr3R 21907535 intergenic CG6678 + chr3R 26275136 3` UTR CG6154 + chr3R 30642736 intergenic not near genes chr3R_4_26275001 chr3R_26275001 RAL-57 1999 chr3R 6308008 6308196 chr3R 21907536 21907536 5 15599423 73.0 23.0 48.0 0.1 15599528 chr3R 6308008 exon CG31556 - chr3R 14107772 exon CG12402 - chr3R 21907536 intergenic CG6678 + chr3R_5_14105001 chr3R_14105001 RAL-57 2000 chr3R 8339246 8339247 chr3R 21907536 21907536 5 13568289 28.0 23.0 25.5 0.2 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-57 2001 chr3R 9620954 9620957 chr3R 21907536 21907536 9 12286580 26.0 23.0 24.5 0.4 12286582 chr3R 9620954 intron CG8312 + chr3R 15764245 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_9_15760001 chr3R_15760001 RAL-57 2002 chr3R 15286987 15286988 chr3R 21907536 21907536 4 6620548 21.5 23.0 22.2 0.2 6620549 chr3R 15286987 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 RAL-57 2003 chr3R 17389054 17389054 chr3R 21907536 21907536 10 4518482 22.5 23.0 22.8 0.4 4518482 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648295 5` UTR CG6195 - chr3R 21907536 intergenic CG6678 + chr3R_10_19645001 chr3R_19645001 RAL-57 2004 chr3R 20177845 20177845 chr3R 21907536 21907536 5 1729691 8.0 23.0 15.5 0.3 1729691 chr3R 20177845 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907536 intergenic CG6678 + chr3R_5_21040001 chr3R_21040001 RAL-57 2005 chr3R 21907536 21907536 chr3R 26659332 26659337 23 4751798 21.5 51.5 36.5 0.6 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_23_24280001 chr3R_24280001 RAL-57 2006 chr3R 21907536 21907536 chr3R 27499989 27499995 4 5592457 21.5 11.5 16.5 0.2 5592459 chr3R 21907536 intergenic CG6678 + chr3R 24703766 intron slo + chr3R 27499995 intergenic not near genes chr3R_4_24700001 chr3R_24700001 RAL-57 2007 chr3R 21907536 21907536 chr3R 28831798 28831804 83 6924266 21.5 36.0 28.8 2.8 6924268 chr3R 21907536 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831804 intron WASp - chr3R_83_25365001 chr3R_25365001 RAL-57 2008 chr3R 21907536 21907536 chr3R 29013339 29013340 16 7105804 21.5 15.0 18.2 0.8 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_16_25460001 chr3R_25460001 RAL-57 2009 chr3R 21937204 21937231 chr3R 21937306 21937333 6 102 2.0 5.0 3.5 1.3 129 chr3R 21937204 intergenic not near genes chr3R 21937268 intergenic not near genes chr3R 21937333 intergenic not near genes chr3R_6_21935001 chr3R_21935001 RAL-57 2010 chr3R 22039053 22039067 chr3R 22039167 22039181 10 114 3.5 3.5 3.5 2.2 128 chr3R 22039053 intergenic not near genes chr3R 22039117 intergenic not near genes chr3R 22039181 intergenic not near genes chr3R_10_22035001 chr3R_22035001 RAL-57 2011 chr3R 22055102 22055122 chr3R 22055215 22055216 6 110 2.5 2.5 2.5 1.7 114 chr3R 22055102 intron how + chr3R 22055159 intron how + chr3R 22055216 intron how + chr3R_6_22055001 chr3R_22055001 RAL-57 2012 chr3R 22073441 22073494 chr3R 22073543 22073596 23 101 6.0 7.5 6.8 2.9 155 chr3R 22073441 intron how + chr3R 22073518 intron how + chr3R 22073596 intron how + chr3R_23_22070001 chr3R_22070001 RAL-57 2013 chr3R 22082417 22082455 chr3R 22082766 22082803 13 347 3.5 9.5 6.5 1.7 386 chr3R 22082417 intron CG13408 + chr3R 22082610 intron CG13408 + chr3R 22082803 intron CG13408 + chr3R_13_22080001 chr3R_22080001 RAL-57 2014 chr3R 22084608 22084620 chr3R 22084721 22084735 5 114 0.0 7.0 3.5 1.1 127 chr3R 22084608 intergenic not near genes chr3R 22084672 intergenic not near genes chr3R 22084735 intergenic not near genes chr3R_5_22080001 chr3R_22080001 RAL-57 2015 chr3R 22133574 22133629 chr3R 22133676 22133732 18 103 4.0 4.0 4.0 3.6 158 chr3R 22133574 intergenic CG42390 +,SKIP + chr3R 22133653 intergenic SKIP +,CG42390 + chr3R 22133732 intergenic SKIP +,CG42390 + chr3R_18_22130001 chr3R_22130001 RAL-57 2016 chr3R 22145563 22145575 chr3R 22145741 22145755 5 179 1.5 9.5 5.5 0.8 192 chr3R 22145563 intron SKIP + chr3R 22145659 intron SKIP + chr3R 22145755 intron SKIP + chr3R_5_22145001 chr3R_22145001 RAL-57 2017 chr3R 22239466 22239511 chr3R 22248551 22248584 roo 5 9077 4.5 0.0 2.2 1.6 9118 chr3R 22239466 intron SKIP + chr3R 22244025 intron SKIP + chr3R 22248584 intron SKIP + chr3R_5_22240001 chr3R_22240001 RAL-57 2018 chr3R 22286121 22286165 chr3R 22286221 22286268 25 100 6.0 3.5 4.8 4.3 147 chr3R 22286121 intron SKIP + chr3R 22286194 intron SKIP + chr3R 22286268 intron SKIP + chr3R_25_22285001 chr3R_22285001 RAL-57 2019 chr3R 22318962 22319011 chr3R 22319067 22319125 7 111 7.0 10.5 8.8 0.7 163 chr3R 22318962 5` UTR CG34377 - chr3R 22319044 intron CG34377 - chr3R 22319125 intron CG34377 - chr3R_7_22315001 chr3R_22315001 RAL-57 2020 chr3R 22321634 22321693 chr3R 22321736 22321795 19 102 4.5 2.0 3.2 4.5 161 chr3R 22321634 intron CG34377 - chr3R 22321714 intron CG34377 - chr3R 22321795 intron CG34377 - chr3R_19_22320001 chr3R_22320001 RAL-57 2021 chr3R 22328291 22328331 chr3R 22328409 22328450 21 118 7.5 7.5 7.5 2.5 159 chr3R 22328291 intergenic not near genes chr3R 22328370 intergenic not near genes chr3R 22328450 intergenic not near genes chr3R_21_22325001 chr3R_22325001 RAL-57 2022 chr3R 22330960 22330986 chr3R 22331076 22331103 10 117 1.0 13.0 7.0 1.2 143 chr3R 22330960 intergenic CG33721 +,CG7080 + chr3R 22331032 intergenic CG33721 +,CG7080 + chr3R 22331103 exon CG33721 + chr3R_10_22330001 chr3R_22330001 RAL-57 2023 chr3R 22338880 22338889 chr3R 22339075 22339078 10 194 14.0 9.5 11.8 0.8 198 chr3R 22338880 intron CG5388 - chr3R 22338979 intron CG5388 - chr3R 22339078 intron CG5388 - chr3R_10_22335001 chr3R_22335001 RAL-57 2024 chr3R 22346158 22346210 chr3R 22346269 22346319 5 110 2.0 2.0 2.0 1.7 161 chr3R 22346158 intergenic not near genes chr3R 22346238 intergenic not near genes chr3R 22346319 intergenic not near genes chr3R_5_22345001 chr3R_22345001 RAL-57 2025 chr3R 22450524 22450569 chr3R 22453186 22453234 NOF 11 2663 9.0 5.5 7.2 1.3 2710 chr3R 22450524 intron CG34376 + chr3R 22451879 intron CG34376 + chr3R 22453234 intron CG34376 + chr3R_11_22450001 chr3R_22450001 RAL-57 2026 chr3R 22640675 22640731 chr3R 22640815 22640869 19 140 6.0 1.5 3.8 4.0 194 chr3R 22640675 intron wake + chr3R 22640772 intron wake + chr3R 22640869 intron wake + chr3R_19_22640001 chr3R_22640001 RAL-57 2027 chr3R 22657651 22657694 chr3R 22657754 22657797 12 103 6.5 14.0 10.2 1.1 146 chr3R 22657651 intron wake + chr3R 22657724 intron wake + chr3R 22657797 intron wake + chr3R_12_22655001 chr3R_22655001 RAL-57 2028 chr3R 22672281 22672333 chr3R 22672399 22672451 12 118 2.5 5.0 3.8 2.5 170 chr3R 22672281 intron wake + chr3R 22672366 intron wake + chr3R 22672451 intron wake + chr3R_12_22670001 chr3R_22670001 RAL-57 2029 chr3R 22769084 22769119 chr3R 22769182 22769221 9 100 1.5 5.5 3.5 2.0 137 chr3R 22769084 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769152 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769221 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_9_22765001 chr3R_22765001 RAL-57 2030 chr3R 22797737 22797936 chr3R 22797846 22798055 16 115 1.5 1.5 1.5 6.4 318 chr3R 22797737 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798055 intergenic not near genes chr3R_16_22795001 chr3R_22795001 RAL-57 2031 chr3R 22803413 22803468 chr3R 22803628 22803684 20 211 9.0 4.5 6.8 2.6 271 chr3R 22803413 intergenic not near genes chr3R 22803548 intergenic not near genes chr3R 22803684 intergenic not near genes chr3R_20_22800001 chr3R_22800001 RAL-57 2032 chr3R 21907534 21907536 chr3R 22824878 22824900 4 917355 21.5 14.5 18.0 0.2 917366 chr3R 21907534 intergenic CG6678 + chr3R 22366217 exon CG5380 - chr3R 22824900 3` UTR CR44350 - chr3R_4_22365001 chr3R_22365001 RAL-57 2033 chr3R 22827396 22827438 chr3R 22827496 22827537 8 97 2.0 2.0 2.0 2.7 141 chr3R 22827396 intergenic CR44350 - chr3R 22827466 intergenic CR44350 - chr3R 22827537 intergenic CR44350 - chr3R_8_22825001 chr3R_22825001 RAL-57 2034 chr3R 22853272 22853288 chr3R 22853373 22853390 5 102 6.0 5.0 5.5 0.8 118 chr3R 22853272 intergenic not near genes chr3R 22853331 intergenic not near genes chr3R 22853390 intergenic not near genes chr3R_5_22850001 chr3R_22850001 RAL-57 2035 chr3R 22863894 22863925 chr3R 22863997 22864026 11 103 3.0 4.0 3.5 2.4 132 chr3R 22863894 intergenic not near genes chr3R 22863960 intergenic not near genes chr3R 22864026 intergenic not near genes chr3R_11_22860001 chr3R_22860001 RAL-57 2036 chr3R 22917968 22917979 chr3R 22918097 22918110 5 130 6.5 17.5 12.0 0.4 142 chr3R 22917968 intron klg + chr3R 22918039 intron klg + chr3R 22918110 intron klg + chr3R_5_22915001 chr3R_22915001 RAL-57 2037 chr3R 23011353 23011405 chr3R 23011474 23011526 19 120 4.5 5.5 5.0 3.2 173 chr3R 23011353 intergenic not near genes chr3R 23011440 intergenic CR44225 - chr3R 23011526 intergenic CR44225 - chr3R_19_23010001 chr3R_23010001 RAL-57 2038 chr3R 23082925 23082978 chr3R 23083149 23083202 6 213 5.0 12.5 8.8 0.6 277 chr3R 23082925 intron CG13830 - chr3R 23083064 intron CG13830 - chr3R 23083202 intron CG13830 - chr3R_6_23080001 chr3R_23080001 RAL-57 2039 chr3R 23090377 23090412 chr3R 23090485 23090512 9 107 3.5 3.0 3.2 2.1 135 chr3R 23090377 intron CG13830 - chr3R 23090444 intron CG13830 - chr3R 23090512 intron CG13830 - chr3R_9_23090001 chr3R_23090001 RAL-57 2040 chr3R 23110859 23110902 chr3R 23111049 23111094 11 191 6.0 4.0 5.0 1.8 235 chr3R 23110859 intron CG13830 - chr3R 23110976 intron CG13830 - chr3R 23111094 intron CG13830 - chr3R_11_23110001 chr3R_23110001 RAL-57 2041 chr3R 23234825 23234836 chr3R 23234927 23234938 7 102 6.0 5.0 5.5 1.1 113 chr3R 23234825 intron CG4467 - chr3R 23234882 intron CG4467 - chr3R 23234938 intron CG4467 - chr3R_7_23230001 chr3R_23230001 RAL-57 2042 chr3R 23245965 23245986 chr3R 23246071 23246093 5 106 7.0 2.5 4.8 0.9 128 chr3R 23245965 intron CG4467 - chr3R 23246029 intron CG4467 - chr3R 23246093 intron CG4467 - chr3R_5_23245001 chr3R_23245001 RAL-57 2043 chr3R 23245995 23246008 chr3R 23246095 23246103 5 103 2.0 6.5 4.2 1.0 108 chr3R 23245995 intron CG4467 - chr3R 23246049 intron CG4467 - chr3R 23246103 intron CG4467 - chr3R_5_23245001 chr3R_23245001 RAL-57 2044 chr3R 23291243 23291277 chr3R 23291332 23291385 22 97 15.5 7.5 11.5 1.8 142 chr3R 23291243 3` UTR pnt - chr3R 23291314 3` UTR pnt - chr3R 23291385 exon pnt - chr3R_22_23290001 chr3R_23290001 RAL-57 2045 chr3R 23338896 23338916 chr3R 23338970 23339015 7 78 7.5 4.0 5.8 1.0 119 chr3R 23338896 intron pnt - chr3R 23338956 intron pnt - chr3R 23339015 intron pnt - chr3R_7_23335001 chr3R_23335001 RAL-57 2046 chr3R 23356962 23357016 chr3R 23357073 23357127 7 111 8.5 4.0 6.2 1.0 165 chr3R 23356962 intron Sec13 + chr3R 23357044 intron Sec13 + chr3R 23357127 intron Sec13 + chr3R_7_23355001 chr3R_23355001 RAL-57 2047 chr3R 23363657 23363699 chr3R 23363768 23363810 12 111 5.5 4.0 4.8 2.1 153 chr3R 23363657 intergenic CG4408 - chr3R 23363734 intergenic CG4408 - chr3R 23363810 intergenic CG4408 - chr3R_12_23360001 chr3R_23360001 RAL-57 2048 chr3R 23390940 23390947 chr3R 23391047 23391054 5 106 10.0 0.5 5.2 0.8 114 chr3R 23390940 intergenic CR43387 + chr3R 23390997 intergenic CR43387 + chr3R 23391054 intergenic CR43387 + chr3R_5_23390001 chr3R_23390001 RAL-57 2049 chr3R 23469223 23469235 chr3R 23469326 23469338 7 100 17.0 9.0 13.0 0.5 115 chr3R 23469223 intron CG4374 - chr3R 23469280 intron CG4374 - chr3R 23469338 intron CG4374 - chr3R_7_23465001 chr3R_23465001 RAL-57 2050 chr3R 23558373 23558396 chr3R 23560179 23560202 Bari1 7 1806 2.5 0.0 1.2 3.2 1829 chr3R 23558373 intron beat-IV + chr3R 23559288 intron beat-IV + chr3R 23560202 intron beat-IV + chr3R_7_23555001 chr3R_23555001 RAL-57 2051 chr3R 10451875 10451877 chr3R 23614722 23614722 10 13162845 13.5 3.5 8.5 1.1 13162847 chr3R 10451875 intergenic not near genes chr3R 17033298 3` UTR CG31268 + chr3R 23614722 intron CG31145 - chr3R_10_17030001 chr3R_17030001 RAL-57 2052 chr3R 23626298 23626355 chr3R 23626422 23626479 41 121 8.5 10.0 9.2 4.0 181 chr3R 23626298 intron CG31145 - chr3R 23626388 intron CG31145 - chr3R 23626479 intron CG31145 - chr3R_41_23625001 chr3R_23625001 RAL-57 2053 chr3R 23629421 23629475 chr3R 23629522 23629551 31 97 8.0 5.0 6.5 4.1 130 chr3R 23629421 intron CG31145 - chr3R 23629486 intron CG31145 - chr3R 23629551 intron CG31145 - chr3R_31_23625001 chr3R_23625001 RAL-57 2054 chr3R 23677162 23677197 chr3R 23677270 23677305 5 108 3.0 5.0 4.0 1.0 143 chr3R 23677162 intergenic CG13822 + chr3R 23677234 intergenic CG13822 + chr3R 23677305 intergenic CG13822 + chr3R_5_23675001 chr3R_23675001 RAL-57 2055 chr3R 23684670 23684725 chr3R 23685181 23685205 roo 25 492 11.0 6.5 8.8 2.6 535 chr3R 23684670 exon CG18754 + chr3R 23684938 intron CG18754 + chr3R 23685205 exon CG18754 + chr3R_25_23680001 chr3R_23680001 RAL-57 2056 chr3R 23835396 23835407 chr3R 23844570 23844582 roo 4 9175 4.0 1.5 2.8 1.1 9186 chr3R 23835396 intron CG34355 + chr3R 23839989 intron CG34355 + chr3R 23844582 intron CG34355 + chr3R_4_23835001 chr3R_23835001 RAL-57 2057 chr3R 23851062 23851087 chr3R 23858754 23858779 opus 7 7692 4.5 7.5 6.0 1.0 7717 chr3R 23851062 3` UTR CG34355 + chr3R 23854920 intergenic not near genes chr3R 23858779 intergenic not near genes chr3R_7_23850001 chr3R_23850001 RAL-57 2058 chr3R 23859021 23859072 chr3R 23859139 23859167 7 115 2.0 1.5 1.8 2.5 146 chr3R 23859021 intergenic not near genes chr3R 23859094 intergenic not near genes chr3R 23859167 intergenic not near genes chr3R_7_23855001 chr3R_23855001 RAL-57 2059 chr3R 23877440 23877462 chr3R 23877711 23877733 4 271 2.5 3.0 2.8 1.1 293 chr3R 23877440 intron Pli - chr3R 23877586 intron Pli - chr3R 23877733 intron Pli - chr3R_4_23875001 chr3R_23875001 RAL-57 2060 chr3R 23877468 23877486 chr3R 23877739 23877757 5 271 1.0 6.5 3.8 1.0 289 chr3R 23877468 intron Pli - chr3R 23877612 intron Pli - chr3R 23877757 intron Pli - chr3R_5_23875001 chr3R_23875001 RAL-57 2061 chr3R 23893780 23893817 chr3R 23893893 23893946 13 125 2.0 13.5 7.8 1.5 166 chr3R 23893780 intergenic sba -,tbrd-1 - chr3R 23893863 intergenic sba -,tbrd-1 - chr3R 23893946 intergenic sba - chr3R_13_23890001 chr3R_23890001 RAL-57 2062 chr3R 23913232 23913251 chr3R 23913588 23913607 10 356 13.5 4.5 9.0 1.0 375 chr3R 23913232 intron sba - chr3R 23913420 intron sba - chr3R 23913607 intron sba - chr3R_10_23910001 chr3R_23910001 RAL-57 2063 chr3R 23913266 23913273 chr3R 23913622 23913629 4 356 9.0 8.5 8.8 0.4 363 chr3R 23913266 intron sba - chr3R 23913448 intron sba - chr3R 23913629 intron sba - chr3R_4_23910001 chr3R_23910001 RAL-57 2064 chr3R 23944885 23944936 chr3R 23944995 23945046 49 109 9.5 13.5 11.5 3.9 161 chr3R 23944885 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945046 exon CG12268 - chr3R_49_23940001 chr3R_23940001 RAL-57 2065 chr3R 24011645 24011674 chr3R 24011753 24011782 22 107 3.5 15.0 9.2 2.2 137 chr3R 24011645 intron KrT95D - chr3R 24011714 intron KrT95D - chr3R 24011782 intron KrT95D - chr3R_22_24010001 chr3R_24010001 RAL-57 2066 chr3R 24072062 24072074 chr3R 24072525 24072536 jockey 6 462 33.5 0.5 17.0 0.3 474 chr3R 24072062 intron 4EHP - chr3R 24072299 intron 4EHP - chr3R 24072536 intron 4EHP - chr3R_6_24070001 chr3R_24070001 RAL-57 2067 chr3R 24072075 24072081 chr3R 24072524 24072531 jockey 4 456 30.5 0.5 15.5 0.2 456 chr3R 24072075 intron 4EHP - chr3R 24072303 intron 4EHP - chr3R 24072531 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-57 2068 chr3R 24072085 24072123 chr3R 24072523 24072584 jockey 14 448 12.5 0.5 6.5 1.9 499 chr3R 24072085 intron 4EHP - chr3R 24072334 intron 4EHP - chr3R 24072584 intron 4EHP - chr3R_14_24070001 chr3R_24070001 RAL-57 2069 chr3R 24074542 24074594 chr3R 24074642 24074695 20 100 4.5 6.0 5.2 3.2 153 chr3R 24074542 intron 4EHP - chr3R 24074618 intron 4EHP - chr3R 24074695 intron 4EHP - chr3R_20_24070001 chr3R_24070001 RAL-57 2070 chr3R 24076905 24076944 chr3R 24078396 24078411 hobo 8 1482 6.5 9.0 7.8 0.9 1506 chr3R 24076905 intron 4EHP - chr3R 24077658 intron 4EHP - chr3R 24078411 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RAL-57 2071 chr3R 24079254 24079272 chr3R 24079359 24079377 5 105 3.5 3.5 3.5 1.1 123 chr3R 24079254 intron 4EHP - chr3R 24079316 intron 4EHP - chr3R 24079377 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-57 2072 chr3R 24100433 24100592 chr3R 24100553 24100841 15 187 0.0 0.0 0.0 15.0 408 chr3R 24100433 intron 4EHP - chr3R 24100637 intron 4EHP - chr3R 24100841 intron 4EHP - chr3R_15_24100001 chr3R_24100001 RAL-57 2073 chr3R 24143972 24144025 chr3R 24144077 24144131 36 104 11.0 10.0 10.5 3.1 159 chr3R 24143972 intron Kal1 + chr3R 24144052 intron Kal1 + chr3R 24144131 intron Kal1 + chr3R_36_24140001 chr3R_24140001 RAL-57 2074 chr3R 24199716 24199770 chr3R 24199821 24199875 25 105 9.0 6.5 7.8 2.8 159 chr3R 24199716 intron twin - chr3R 24199796 intron twin - chr3R 24199875 intron twin - chr3R_25_24195001 chr3R_24195001 RAL-57 2075 chr3R 24207195 24207242 chr3R 24212296 24212328 flea 15 5100 5.0 5.5 5.2 2.4 5133 chr3R 24207195 intron twin - chr3R 24209762 intron twin - chr3R 24212328 intron twin - chr3R_15_24205001 chr3R_24205001 RAL-57 2076 chr3R 21907534 21907536 chr3R 24389465 24389465 15 2481930 21.5 28.0 24.8 0.6 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_15_23145001 chr3R_23145001 RAL-57 2077 chr3R 24431576 24431627 chr3R 24431680 24431730 15 104 5.0 0.0 2.5 4.3 154 chr3R 24431576 intron nAChRalpha1 - chr3R 24431653 intron nAChRalpha1 - chr3R 24431730 intron nAChRalpha1 - chr3R_15_24430001 chr3R_24430001 RAL-57 2078 chr3R 24434214 24434271 chr3R 24434317 24434374 25 102 7.5 5.5 6.5 3.3 160 chr3R 24434214 intron nAChRalpha1 - chr3R 24434294 intron nAChRalpha1 - chr3R 24434374 intron nAChRalpha1 - chr3R_25_24430001 chr3R_24430001 RAL-57 2079 chr3R 24493260 24493306 chr3R 24493512 24493592 BS 8 275 2.5 0.0 1.2 3.6 332 chr3R 24493260 intergenic not near genes chr3R 24493426 intergenic not near genes chr3R 24493592 intergenic not near genes chr3R_8_24490001 chr3R_24490001 RAL-57 2080 chr3R 24523878 24523921 chr3R 24523989 24524032 9 111 3.0 1.5 2.2 2.8 154 chr3R 24523878 intergenic CG13622 - chr3R 24523955 intergenic CG13622 - chr3R 24524032 intergenic CG13622 - chr3R_9_24520001 chr3R_24520001 RAL-57 2081 chr3R 24527781 24527836 chr3R 24527897 24527952 16 116 3.0 4.0 3.5 3.6 171 chr3R 24527781 intergenic CG13618 +,CG6607 + chr3R 24527866 intergenic CG6607 +,CG13618 + chr3R 24527952 intergenic CG6607 +,CG13618 + chr3R_16_24525001 chr3R_24525001 RAL-57 2082 chr3R 24612853 24612909 chr3R 24612956 24613012 14 103 3.0 4.5 3.8 2.9 159 chr3R 24612853 intron mld + chr3R 24612932 intron mld + chr3R 24613012 intron mld + chr3R_14_24610001 chr3R_24610001 RAL-57 2083 chr3R 24624349 24624395 chr3R 24624463 24624509 27 114 5.0 11.0 8.0 3.0 160 chr3R 24624349 intron Syx18 - chr3R 24624429 intron Syx18 - chr3R 24624509 exon Syx18 - chr3R_27_24620001 chr3R_24620001 RAL-57 2084 chr3R 24670139 24670184 chr3R 24670248 24670293 5 109 1.0 1.5 1.2 2.3 154 chr3R 24670139 intron slo + chr3R 24670216 intron slo + chr3R 24670293 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-57 2085 chr3R 24728312 24728358 chr3R 24728510 24728556 38 197 17.5 7.5 12.5 2.8 244 chr3R 24728312 exon tok + chr3R 24728434 intron tok + chr3R 24728556 intron tok + chr3R_38_24725001 chr3R_24725001 RAL-57 2086 chr3R 24730078 24730096 chr3R 24732479 24732487 Doc 10 2398 17.0 1.0 9.0 1.0 2409 chr3R 24730078 intron tok + chr3R 24731282 intron tok + chr3R 24732487 intron tok + chr3R_10_24730001 chr3R_24730001 RAL-57 2087 chr3R 24739888 24739910 chr3R 24740025 24740047 4 136 12.0 4.0 8.0 0.4 159 chr3R 24739888 intron tok + chr3R 24739968 intron tok + chr3R 24740047 intron tok + chr3R_4_24735001 chr3R_24735001 RAL-57 2088 chr3R 24739911 24739935 chr3R 24740020 24740050 13 132 7.5 2.5 5.0 2.2 139 chr3R 24739911 intron tok + chr3R 24739980 intron tok + chr3R 24740050 intron tok + chr3R_13_24735001 chr3R_24735001 RAL-57 2089 chr3R 24743004 24743063 chr3R 24743114 24743171 36 110 7.0 7.5 7.2 4.4 167 chr3R 24743004 intron tok + chr3R 24743088 intron tok + chr3R 24743171 exon tok + chr3R_36_24740001 chr3R_24740001 RAL-57 2090 chr3R 24787523 24787560 chr3R 24787624 24787661 7 101 6.5 2.0 4.2 1.3 138 chr3R 24787523 intergenic CG5805 - chr3R 24787592 intergenic CG5805 -,Ets96B + chr3R 24787661 intergenic CG5805 -,Ets96B + chr3R_7_24785001 chr3R_24785001 RAL-57 2091 chr3R 24789957 24790011 chr3R 24790127 24790181 25 168 8.0 8.0 8.0 2.8 224 chr3R 24789957 intron,5` UTR Ets96B +,CG13634 - chr3R 24790069 intron,5` UTR Ets96B +,CG13634 - chr3R 24790181 intron Ets96B + chr3R_25_24790001 chr3R_24790001 RAL-57 2092 chr3R 24893441 24893472 chr3R 24893546 24893577 13 105 5.0 3.5 4.2 2.5 136 chr3R 24893441 intron CG31121 - chr3R 24893509 intron CG31121 - chr3R 24893577 intron CG31121 - chr3R_13_24890001 chr3R_24890001 RAL-57 2093 chr3R 24927108 24927144 chr3R 24931923 24931960 Doc 29 4815 14.0 15.0 14.5 1.9 4852 chr3R 24927108 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931960 intergenic CG11771 + chr3R_29_24925001 chr3R_24925001 RAL-57 2094 chr3R 24927145 24927162 chr3R 24931911 24931943 Doc 8 4802 10.0 13.0 11.5 0.6 4798 chr3R 24927145 intergenic Trf4-2 + chr3R 24929544 intergenic not near genes chr3R 24931943 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 RAL-57 2095 chr3R 24969466 24969497 chr3R 24969605 24969635 10 139 1.5 4.0 2.8 2.6 169 chr3R 24969466 intergenic not near genes chr3R 24969550 intergenic not near genes chr3R 24969635 intergenic not near genes chr3R_10_24965001 chr3R_24965001 RAL-57 2096 chr3R 25018252 25018290 chr3R 25018335 25018341 14 81 2.5 7.5 5.0 2.3 89 chr3R 25018252 exon tnc + chr3R 25018296 exon tnc + chr3R 25018341 exon tnc + chr3R_14_25015001 chr3R_25015001 RAL-57 2097 chr3R 25027511 25027568 chr3R 25027749 25027806 30 238 3.5 11.0 7.2 3.7 295 chr3R 25027511 intron Hr96 + chr3R 25027658 intron Hr96 + chr3R 25027806 intron Hr96 + chr3R_30_25025001 chr3R_25025001 RAL-57 2098 chr3R 25166229 25166390 chr3R 25166334 25166491 14 102 0.5 0.0 0.2 11.7 262 chr3R 25166229 intergenic not near genes chr3R 25166360 intergenic not near genes chr3R 25166491 intergenic not near genes chr3R_14_25165001 chr3R_25165001 RAL-57 2099 chr3R 25192764 25192810 chr3R 25192921 25192967 17 157 7.0 9.5 8.2 1.8 203 chr3R 25192764 intron,3` UTR lobo -,dan + chr3R 25192866 intron lobo - chr3R 25192967 intron lobo - chr3R_17_25190001 chr3R_25190001 RAL-57 2100 chr3R 25302654 25302700 chr3R 25302928 25302974 7 274 0.5 0.5 0.5 4.7 320 chr3R 25302654 exon CG31370 + chr3R 25302814 exon CG31370 + chr3R 25302974 exon CG31370 + chr3R_7_25300001 chr3R_25300001 RAL-57 2101 chr3R 25368461 25368482 chr3R 25368604 25368624 4 143 3.0 0.0 1.5 1.6 163 chr3R 25368461 intron Fur1 - chr3R 25368542 intron Fur1 - chr3R 25368624 intron Fur1 - chr3R_4_25365001 chr3R_25365001 RAL-57 2102 chr3R 25621015 25621071 chr3R 25621116 25621172 13 101 8.5 7.5 8.0 1.4 157 chr3R 25621015 intron Npl4 - chr3R 25621094 intron Npl4 - chr3R 25621172 intron Npl4 - chr3R_13_25620001 chr3R_25620001 RAL-57 2103 chr3R 25696311 25696346 chr3R 25696405 25696412 5 82 1.5 1.0 1.2 2.3 101 chr3R 25696311 intergenic not near genes chr3R 25696362 intergenic not near genes chr3R 25696412 intergenic not near genes chr3R_5_25695001 chr3R_25695001 RAL-57 2104 chr3R 25725810 25725852 chr3R 25734995 25735037 roo 8 9184 2.0 1.0 1.5 3.2 9227 chr3R 25725810 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735037 intron LpR2 - chr3R_8_25730001 chr3R_25730001 RAL-57 2105 chr3R 25736242 25736286 chr3R 25736355 25736400 7 114 3.5 3.5 3.5 1.6 158 chr3R 25736242 intron LpR2 - chr3R 25736321 intron LpR2 - chr3R 25736400 intron LpR2 - chr3R_7_25735001 chr3R_25735001 RAL-57 2106 chr3R 25765854 25765859 chr3R 25765958 25765963 6 104 20.5 5.5 13.0 0.4 109 chr3R 25765854 intergenic not near genes chr3R 25765908 intergenic not near genes chr3R 25765963 intergenic not near genes chr3R_6_25765001 chr3R_25765001 RAL-57 2107 chr3R 25765860 25765911 chr3R 25765955 25765978 23 89 7.5 6.5 7.0 2.9 118 chr3R 25765860 intergenic not near genes chr3R 25765919 intergenic not near genes chr3R 25765978 intergenic not near genes chr3R_23_25765001 chr3R_25765001 RAL-57 2108 chr3R 25766454 25766504 chr3R 25766627 25766671 17 171 6.0 4.0 5.0 2.8 217 chr3R 25766454 intergenic not near genes chr3R 25766562 intergenic not near genes chr3R 25766671 intergenic not near genes chr3R_17_25765001 chr3R_25765001 RAL-57 2109 chr3R 25781992 25782012 chr3R 25782093 25782113 5 100 3.5 4.0 3.8 1.0 121 chr3R 25781992 intergenic not near genes chr3R 25782052 intergenic not near genes chr3R 25782113 intergenic not near genes chr3R_5_25780001 chr3R_25780001 RAL-57 2110 chr3R 25782033 25782046 chr3R 25782134 25782146 4 101 3.5 6.5 5.0 0.7 113 chr3R 25782033 intergenic not near genes chr3R 25782090 intergenic not near genes chr3R 25782146 intergenic not near genes chr3R_4_25780001 chr3R_25780001 RAL-57 2111 chr3R 25830347 25830369 chr3R 25830455 25830477 5 108 2.5 1.0 1.8 1.8 130 chr3R 25830347 intergenic Sfp96F -,Mst57Db - chr3R 25830412 intergenic Sfp96F -,Mst57Db - chr3R 25830477 intergenic Mst57Db -,Sfp96F - chr3R_5_25830001 chr3R_25830001 RAL-57 2112 chr3R 25832674 25832693 chr3R 25841879 25841900 roo 5 9207 8.0 3.5 5.8 0.7 9226 chr3R 25832674 exon alpha4GT2 + chr3R 25837287 intron alpha4GT2 + chr3R 25841900 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-57 2113 chr3R 25832701 25832709 chr3R 25841873 25841910 roo 4 9197 4.5 3.0 3.8 0.8 9209 chr3R 25832701 exon alpha4GT2 + chr3R 25837306 intron alpha4GT2 + chr3R 25841910 exon alpha4GT2 + chr3R_4_25835001 chr3R_25835001 RAL-57 2114 chr3R 25843615 25843665 chr3R 25843770 25843797 9 151 1.0 2.5 1.8 3.2 182 chr3R 25843615 intergenic CR45653 + chr3R 25843706 intergenic CR45653 + chr3R 25843797 intergenic CR45653 + chr3R_9_25840001 chr3R_25840001 RAL-57 2115 chr3R 25905895 25905912 chr3R 25906114 25906131 9 218 11.5 6.5 9.0 0.9 236 chr3R 25905895 intron CR43259 - chr3R 25906013 intron CR43259 - chr3R 25906131 3` UTR CR43259 - chr3R_9_25905001 chr3R_25905001 RAL-57 2116 chr3R 25905916 25905936 chr3R 25906101 25906122 15 212 6.0 5.0 5.5 2.3 206 chr3R 25905916 intron CR43259 - chr3R 25906019 intron CR43259 - chr3R 25906122 3` UTR CR43259 - chr3R_15_25905001 chr3R_25905001 RAL-57 2117 chr3R 26071157 26071209 chr3R 26071265 26071317 6 108 3.5 3.0 3.2 1.4 160 chr3R 26071157 3` UTR CR44950 - chr3R 26071237 3` UTR CR44950 - chr3R 26071317 intron CR44950 - chr3R_6_26070001 chr3R_26070001 RAL-57 2118 chr3R 26122439 26122473 chr3R 26122540 26122574 13 99 6.5 6.0 6.2 1.8 135 chr3R 26122439 intron CG31324 + chr3R 26122506 intron CG31324 + chr3R 26122574 intron CG31324 + chr3R_13_26120001 chr3R_26120001 RAL-57 2119 chr3R 26126525 26126556 chr3R 26126636 26126667 13 111 6.5 7.0 6.8 1.7 142 chr3R 26126525 intron CG31324 + chr3R 26126596 intron CG31324 + chr3R 26126667 intron,5` UTR CG31324 +,CG14556 + chr3R_13_26125001 chr3R_26125001 RAL-57 2120 chr3R 26247226 26247284 chr3R 26247388 26247415 8 143 3.5 2.5 3.0 2.0 189 chr3R 26247226 intron CR42745 + chr3R 26247320 intron CR42745 + chr3R 26247415 intron CR42745 + chr3R_8_26245001 chr3R_26245001 RAL-57 2121 chr3R 26292094 26292132 chr3R 26292197 26292237 13 104 5.5 5.5 5.5 2.0 143 chr3R 26292094 intergenic not near genes chr3R 26292166 intergenic not near genes chr3R 26292237 intergenic not near genes chr3R_13_26290001 chr3R_26290001 RAL-57 2122 chr3R 26370316 26370351 chr3R 26370422 26370459 4 108 0.0 0.5 0.2 3.3 143 chr3R 26370316 intergenic not near genes chr3R 26370388 intergenic not near genes chr3R 26370459 intergenic not near genes chr3R_4_26370001 chr3R_26370001 RAL-57 2123 chr3R 26428465 26428513 chr3R 26429133 26429188 8 663 1.5 1.5 1.5 3.2 723 chr3R 26428465 intergenic CR31084 +,CR43434 + chr3R 26428826 5` UTR CR43434 + chr3R 26429188 intergenic CR43434 + chr3R_8_26425001 chr3R_26425001 RAL-57 2124 chr3R 26510483 26510508 chr3R 26519569 26519594 roo 5 9086 4.0 1.0 2.5 1.4 9111 chr3R 26510483 intron plum - chr3R 26515038 intron plum - chr3R 26519594 intron,5` UTR plum -,CR45226 + chr3R_5_26515001 chr3R_26515001 RAL-57 2125 chr3R 26558304 26558360 chr3R 26565642 26565695 Stalker4 18 7328 4.0 3.5 3.8 3.8 7391 chr3R 26558304 intron scrib + chr3R 26562000 intron scrib + chr3R 26565695 intron scrib + chr3R_18_26560001 chr3R_26560001 RAL-57 2126 chr3R 26611321 26611372 chr3R 26611418 26611465 12 93 2.5 2.5 2.5 3.4 144 chr3R 26611321 intergenic not near genes chr3R 26611393 intergenic not near genes chr3R 26611465 intergenic not near genes chr3R_12_26610001 chr3R_26610001 RAL-57 2127 chr3R 26616020 26616071 chr3R 26616159 26616214 25 140 3.0 8.5 5.8 3.7 194 chr3R 26616020 intergenic not near genes chr3R 26616117 intergenic not near genes chr3R 26616214 intergenic not near genes chr3R_25_26615001 chr3R_26615001 RAL-57 2128 chr3R 26656623 26656651 chr3R 26656724 26656758 6 116 6.5 0.5 3.5 1.3 135 chr3R 26656623 intron,exon beat-VII -,Tb + chr3R 26656690 intron,exon beat-VII -,Tb + chr3R 26656758 intron,exon beat-VII -,Tb + chr3R_6_26655001 chr3R_26655001 RAL-57 2129 chr3R 21907534 21907536 chr3R 26659332 26659337 22 4751800 21.5 51.5 36.5 0.6 4751803 chr3R 21907534 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_22_24280001 chr3R_24280001 RAL-57 2130 chr3R 26669640 26669673 chr3R 26669747 26669780 6 107 1.5 2.5 2.0 2.0 140 chr3R 26669640 intron beat-VII - chr3R 26669710 intron beat-VII - chr3R 26669780 intron beat-VII - chr3R_6_26665001 chr3R_26665001 RAL-57 2131 chr3R 8962032 8962046 chr3R 26675435 26675448 4 17713402 11.5 13.0 12.2 0.3 17713416 chr3R 8962032 5` UTR CG11966 - chr3R 17818740 intron tinc + chr3R 26675448 intron beat-VII - chr3R_4_17815001 chr3R_17815001 RAL-57 2132 chr3R 26767371 26767394 chr3R 26767454 26767455 5 80 5.0 3.5 4.2 1.0 84 chr3R 26767371 intergenic not near genes chr3R 26767413 intergenic not near genes chr3R 26767455 intergenic not near genes chr3R_5_26765001 chr3R_26765001 RAL-57 2133 chr3R 26770217 26770246 chr3R 26770318 26770348 6 101 2.5 0.5 1.5 2.4 131 chr3R 26770217 intergenic CR45563 + chr3R 26770282 intergenic CR45563 + chr3R 26770348 intergenic not near genes chr3R_6_26770001 chr3R_26770001 RAL-57 2134 chr3R 26810535 26810582 chr3R 26811045 26811090 roo 6 509 2.5 4.5 3.5 1.3 555 chr3R 26810535 intron Tl + chr3R 26810812 intron Tl + chr3R 26811090 intron Tl + chr3R_6_26810001 chr3R_26810001 RAL-57 2135 chr3R 26870771 26870819 chr3R 26870874 26870922 28 101 10.5 10.5 10.5 2.4 151 chr3R 26870771 intron BM-40-SPARC - chr3R 26870846 intron BM-40-SPARC - chr3R 26870922 intron BM-40-SPARC - chr3R_28_26870001 chr3R_26870001 RAL-57 2136 chr3R 26901481 26901531 chr3R 26901591 26901638 4 109 1.5 0.0 0.8 2.2 157 chr3R 26901481 intron T48 + chr3R 26901560 intron T48 + chr3R 26901638 intron T48 + chr3R_4_26900001 chr3R_26900001 RAL-57 2137 chr3R 26908010 26908059 chr3R 26908132 26908181 27 121 3.0 11.5 7.2 3.3 171 chr3R 26908010 intron T48 + chr3R 26908096 intron T48 + chr3R 26908181 intron T48 + chr3R_27_26905001 chr3R_26905001 RAL-57 2138 chr3R 27027658 27027700 chr3R 27027767 27027807 10 107 2.0 0.5 1.2 4.5 149 chr3R 27027658 intron RYa-R + chr3R 27027732 intron RYa-R + chr3R 27027807 intron RYa-R + chr3R_10_27025001 chr3R_27025001 RAL-57 2139 chr3R 27028698 27028753 chr3R 27028802 27028857 11 104 3.0 3.0 3.0 2.8 159 chr3R 27028698 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028857 intron RYa-R + chr3R_11_27025001 chr3R_27025001 RAL-57 2140 chr3R 27051647 27051695 chr3R 27051763 27051809 7 116 5.0 0.0 2.5 2.0 162 chr3R 27051647 intron RYa-R + chr3R 27051728 intron RYa-R + chr3R 27051809 intron RYa-R + chr3R_7_27050001 chr3R_27050001 RAL-57 2141 chr3R 27073642 27073685 chr3R 27073750 27073793 9 108 3.5 5.0 4.2 1.7 151 chr3R 27073642 intergenic not near genes chr3R 27073718 intergenic not near genes chr3R 27073793 intergenic not near genes chr3R_9_27070001 chr3R_27070001 RAL-57 2142 chr3R 27140490 27140539 chr3R 27148125 27148173 412 28 7633 7.5 4.5 6.0 4.0 7683 chr3R 27140490 intron CG6051 - chr3R 27144332 intron CG6051 - chr3R 27148173 intron CG6051 - chr3R_28_27140001 chr3R_27140001 RAL-57 2143 chr3R 27254256 27254314 chr3R 27254402 27254460 54 144 17.5 18.0 17.8 2.9 204 chr3R 27254256 intron TfIIA-L + chr3R 27254358 intron TfIIA-L + chr3R 27254460 intron TfIIA-L + chr3R_54_27250001 chr3R_27250001 RAL-57 2144 chr3R 27293777 27293826 chr3R 27293902 27293951 14 125 3.0 3.5 3.2 3.3 174 chr3R 27293777 intergenic not near genes chr3R 27293864 intergenic CG3339 - chr3R 27293951 intergenic CG3339 - chr3R_14_27290001 chr3R_27290001 RAL-57 2145 chr3R 27315971 27316012 chr3R 27316068 27316087 46 97 11.5 10.0 10.8 3.9 116 chr3R 27315971 intron CG3339 - chr3R 27316029 intron CG3339 - chr3R 27316087 exon CG3339 - chr3R_46_27315001 chr3R_27315001 RAL-57 2146 chr3R 27317079 27317104 chr3R 27317184 27317208 22 105 19.5 20.0 19.8 1.1 129 chr3R 27317079 intron CG3339 - chr3R 27317144 intron CG3339 - chr3R 27317208 intron CG3339 - chr3R_22_27315001 chr3R_27315001 RAL-57 2147 chr3R 27329455 27329496 chr3R 27329556 27329598 8 102 2.5 2.0 2.2 2.5 143 chr3R 27329455 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329598 intergenic CG3330 - chr3R_8_27325001 chr3R_27325001 RAL-57 2148 chr3R 27335923 27335935 chr3R 27336029 27336041 6 106 7.0 0.0 3.5 1.3 118 chr3R 27335923 intergenic not near genes chr3R 27335982 intergenic not near genes chr3R 27336041 intergenic not near genes chr3R_6_27335001 chr3R_27335001 RAL-57 2149 chr3R 27335941 27335962 chr3R 27336043 27336068 6 105 2.5 0.0 1.2 2.7 127 chr3R 27335941 intergenic not near genes chr3R 27336004 intergenic not near genes chr3R 27336068 intergenic not near genes chr3R_6_27335001 chr3R_27335001 RAL-57 2150 chr3R 27342770 27342818 chr3R 27351376 27351418 Tirant 24 8605 9.0 7.0 8.0 2.7 8648 chr3R 27342770 intron CG42534 + chr3R 27347094 intron CG42534 + chr3R 27351418 intron CG42534 + chr3R_24_27345001 chr3R_27345001 RAL-57 2151 chr3R 27393730 27393781 chr3R 27393834 27393889 10 108 4.0 2.5 3.2 2.4 159 chr3R 27393730 intron side - chr3R 27393810 intron side - chr3R 27393889 intron side - chr3R_10_27390001 chr3R_27390001 RAL-57 2152 chr3R 27426158 27426175 chr3R 27426257 27426271 11 96 1.0 9.5 5.2 1.8 113 chr3R 27426158 intron side - chr3R 27426214 intron side - chr3R 27426271 intron side - chr3R_11_27425001 chr3R_27425001 RAL-57 2153 chr3R 27452562 27452610 chr3R 27452767 27452815 11 205 3.5 2.5 3.0 2.8 253 chr3R 27452562 intergenic not near genes chr3R 27452688 intergenic not near genes chr3R 27452815 intergenic not near genes chr3R_11_27450001 chr3R_27450001 RAL-57 2154 chr3R 27482334 27482373 chr3R 27482451 27482504 7 124 1.5 3.0 2.2 2.2 170 chr3R 27482334 3` UTR Cyp6a18 + chr3R 27482419 3` UTR Cyp6a18 + chr3R 27482504 3` UTR Cyp6a18 + chr3R_7_27480001 chr3R_27480001 RAL-57 2155 chr3R 27492373 27492410 chr3R 27492485 27492508 4 108 1.0 2.0 1.5 1.6 135 chr3R 27492373 intergenic not near genes chr3R 27492440 intergenic not near genes chr3R 27492508 intergenic not near genes chr3R_4_27490001 chr3R_27490001 RAL-57 2156 chr3R 27496578 27496604 chr3R 27496700 27496734 8 126 4.0 4.0 4.0 1.6 156 chr3R 27496578 intergenic not near genes chr3R 27496656 intergenic not near genes chr3R 27496734 intergenic not near genes chr3R_8_27495001 chr3R_27495001 RAL-57 2157 chr3R 27502942 27502982 chr3R 27503191 27503231 11 248 2.0 2.0 2.0 3.7 289 chr3R 27502942 5` UTR CG5402 - chr3R 27503086 intergenic CG5402 - chr3R 27503231 intergenic CG5402 - chr3R_11_27500001 chr3R_27500001 RAL-57 2158 chr3R 27521139 27521185 chr3R 27530373 27530418 roo 25 9234 8.0 7.0 7.5 2.9 9279 chr3R 27521139 intron CG12885 + chr3R 27525778 intron CG12885 + chr3R 27530418 intron CG12885 + chr3R_25_27525001 chr3R_27525001 RAL-57 2159 chr3R 27571583 27571604 chr3R 27571690 27571710 7 112 3.5 6.5 5.0 1.2 127 chr3R 27571583 intron wdb - chr3R 27571646 intron wdb - chr3R 27571710 intron wdb - chr3R_7_27570001 chr3R_27570001 RAL-57 2160 chr3R 27705333 27705391 chr3R 27705438 27705486 28 95 9.5 9.5 9.5 2.7 153 chr3R 27705333 exon CG12428 - chr3R 27705410 intron CG12428 - chr3R 27705486 exon CG12428 - chr3R_28_27705001 chr3R_27705001 RAL-57 2161 chr3R 27725544 27725590 chr3R 27731010 27731056 I-element 14 5467 5.5 4.5 5.0 2.3 5512 chr3R 27725544 intergenic not near genes chr3R 27728300 intergenic not near genes chr3R 27731056 intergenic not near genes chr3R_14_27725001 chr3R_27725001 RAL-57 2162 chr3R 27779243 27779287 chr3R 27779348 27779391 37 99 17.5 23.0 20.2 1.7 148 chr3R 27779243 exon CG34353 - chr3R 27779317 intron CG34353 - chr3R 27779391 intron CG34353 - chr3R_37_27775001 chr3R_27775001 RAL-57 2163 chr3R 27840225 27840256 chr3R 27840372 27840416 9 160 7.0 0.0 3.5 2.0 191 chr3R 27840225 intron CG34353 - chr3R 27840320 intron CG34353 - chr3R 27840416 intron CG34353 - chr3R_9_27840001 chr3R_27840001 RAL-57 2164 chr3R 27856734 27856788 chr3R 27858242 27858291 hopper2 12 1503 5.0 4.0 4.5 2.2 1557 chr3R 27856734 intron CG34353 - chr3R 27857512 intron CG34353 - chr3R 27858291 intron CG34353 - chr3R_12_27855001 chr3R_27855001 RAL-57 2165 chr3R 27871055 27871084 chr3R 27871181 27871210 5 126 3.0 3.5 3.2 1.2 155 chr3R 27871055 intron CG34353 - chr3R 27871132 intron CG34353 - chr3R 27871210 intron CG34353 - chr3R_5_27870001 chr3R_27870001 RAL-57 2166 chr3R 27875706 27875729 chr3R 27882786 27882808 297 6 7080 1.5 2.5 2.0 2.0 7102 chr3R 27875706 intron CG34353 - chr3R 27879257 intron CG34353 - chr3R 27882808 intron CG34353 - chr3R_6_27875001 chr3R_27875001 RAL-57 2167 chr3R 27900109 27900160 chr3R 27900238 27900290 9 130 2.0 0.0 1.0 4.5 181 chr3R 27900109 intron CG34353 - chr3R 27900200 intron CG34353 - chr3R 27900290 intron CG34353 - chr3R_9_27900001 chr3R_27900001 RAL-57 2168 chr3R 27911228 27911253 chr3R 27911331 27911356 9 103 5.0 5.5 5.2 1.5 128 chr3R 27911228 intergenic not near genes chr3R 27911292 intergenic not near genes chr3R 27911356 intergenic not near genes chr3R_9_27910001 chr3R_27910001 RAL-57 2169 chr3R 28002905 28002921 chr3R 28003007 28003023 5 102 3.5 6.5 5.0 0.8 118 chr3R 28002905 intergenic not near genes chr3R 28002964 intergenic not near genes chr3R 28003023 intergenic not near genes chr3R_5_28000001 chr3R_28000001 RAL-57 2170 chr3R 28068478 28068524 chr3R 28073943 28073973 I-element 25 5465 1.5 11.0 6.2 3.5 5495 chr3R 28068478 intron CG34362 + chr3R 28071226 intron CG34362 + chr3R 28073973 intron CG34362 + chr3R_25_28070001 chr3R_28070001 RAL-57 2171 chr3R 28110150 28110204 chr3R 28110255 28110297 11 102 9.5 5.0 7.2 1.3 147 chr3R 28110150 intergenic not near genes chr3R 28110224 intergenic not near genes chr3R 28110297 intergenic not near genes chr3R_11_28110001 chr3R_28110001 RAL-57 2172 chr3R 28152845 28152849 chr3R 28152930 28152955 5 102 2.0 7.5 4.8 0.9 110 chr3R 28152845 intron CG34354 + chr3R 28152900 intron CG34354 + chr3R 28152955 intron CG34354 + chr3R_5_28150001 chr3R_28150001 RAL-57 2173 chr3R 28173655 28173690 chr3R 28181110 28181145 mdg1 8 7455 3.0 3.5 3.2 1.9 7490 chr3R 28173655 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181145 intron CG34354 + chr3R_8_28175001 chr3R_28175001 RAL-57 2174 chr3R 28253331 28253347 chr3R 28255866 28255881 jockey 4 2534 8.0 4.5 6.2 0.6 2550 chr3R 28253331 intergenic not near genes chr3R 28254606 intergenic not near genes chr3R 28255881 intergenic not near genes chr3R_4_28250001 chr3R_28250001 RAL-57 2175 chr3R 28253348 28253368 chr3R 28255865 28255903 jockey 8 2533 4.5 4.5 4.5 1.5 2555 chr3R 28253348 intergenic not near genes chr3R 28254626 intergenic not near genes chr3R 28255903 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-57 2176 chr3R 28345622 28345675 chr3R 28345723 28345776 16 99 7.5 4.0 5.8 2.4 154 chr3R 28345622 intergenic Moca-cyp + chr3R 28345699 intergenic not near genes chr3R 28345776 intergenic not near genes chr3R_16_28345001 chr3R_28345001 RAL-57 2177 chr3R 28416099 28416127 chr3R 28416240 28416269 11 136 13.0 4.0 8.5 1.2 170 chr3R 28416099 intergenic not near genes chr3R 28416184 intergenic not near genes chr3R 28416269 intergenic not near genes chr3R_11_28415001 chr3R_28415001 RAL-57 2178 chr3R 28442155 28442160 chr3R 28442247 28442255 4 97 12.0 9.5 10.8 0.3 100 chr3R 28442155 intron beat-VI + chr3R 28442205 intron beat-VI + chr3R 28442255 intron beat-VI + chr3R_4_28440001 chr3R_28440001 RAL-57 2179 chr3R 28442163 28442187 chr3R 28442242 28442284 12 94 7.5 7.5 7.5 1.4 121 chr3R 28442163 intron beat-VI + chr3R 28442224 intron beat-VI + chr3R 28442284 intron beat-VI + chr3R_12_28440001 chr3R_28440001 RAL-57 2180 chr3R 28479503 28479539 chr3R 28480096 28480133 19 593 4.0 6.5 5.2 3.1 630 chr3R 28479503 intergenic not near genes chr3R 28479818 intergenic not near genes chr3R 28480133 intergenic not near genes chr3R_19_28475001 chr3R_28475001 RAL-57 2181 chr3R 28554678 28554729 chr3R 28554793 28554824 8 102 3.5 4.5 4.0 1.6 146 chr3R 28554678 intergenic not near genes chr3R 28554751 intergenic not near genes chr3R 28554824 intergenic not near genes chr3R_8_28550001 chr3R_28550001 RAL-57 2182 chr3R 28633169 28633213 chr3R 28633273 28633308 7 103 2.0 2.5 2.2 2.2 139 chr3R 28633169 intron CG10011 - chr3R 28633238 intron CG10011 - chr3R 28633308 intron CG10011 - chr3R_7_28630001 chr3R_28630001 RAL-57 2183 chr3R 28687073 28687123 chr3R 28687177 28687214 15 98 3.0 3.5 3.2 3.6 141 chr3R 28687073 intron CG9990 + chr3R 28687144 intron CG9990 + chr3R 28687214 intron CG9990 + chr3R_15_28685001 chr3R_28685001 RAL-57 2184 chr3R 28711713 28711770 chr3R 28711827 28711884 23 114 5.0 7.5 6.2 3.2 171 chr3R 28711713 intron htt + chr3R 28711798 intron htt + chr3R 28711884 intron htt + chr3R_23_28710001 chr3R_28710001 RAL-57 2185 chr3R 28712856 28712909 chr3R 28712970 28713028 14 114 10.5 0.0 5.2 2.3 172 chr3R 28712856 intron htt + chr3R 28712942 intron htt + chr3R 28713028 intron htt + chr3R_14_28710001 chr3R_28710001 RAL-57 2186 chr3R 28742470 28742511 chr3R 28742564 28742612 19 100 5.0 5.0 5.0 3.2 142 chr3R 28742470 intron AstA-R2 - chr3R 28742541 intron AstA-R2 - chr3R 28742612 intron AstA-R2 - chr3R_19_28740001 chr3R_28740001 RAL-57 2187 chr3R 28792853 28792896 chr3R 28797972 28797988 jockey 7 5105 2.5 1.5 2.0 2.3 5135 chr3R 28792853 intergenic not near genes chr3R 28795420 intergenic not near genes chr3R 28797988 intergenic not near genes chr3R_7_28795001 chr3R_28795001 RAL-57 2188 chr3R 28811547 28811604 chr3R 28811718 28811775 24 171 9.5 6.5 8.0 2.7 228 chr3R 28811547 intergenic wdn - chr3R 28811661 intergenic wdn -,CG1646 + chr3R 28811775 intergenic CG1646 +,wdn - chr3R_24_28810001 chr3R_28810001 RAL-57 2189 chr3R 28829825 28829877 chr3R 28830461 28830510 17 634 5.5 5.5 5.5 2.6 685 chr3R 28829825 intron WASp - chr3R 28830168 intron WASp - chr3R 28830510 exon WASp - chr3R_17_28830001 chr3R_28830001 RAL-57 2190 chr3R 28830864 28830918 chr3R 28830967 28831021 13 98 2.5 4.0 3.2 3.1 157 chr3R 28830864 intron WASp - chr3R 28830942 intron WASp - chr3R 28831021 intron WASp - chr3R_13_28830001 chr3R_28830001 RAL-57 2191 chr3R 21907534 21907536 chr3R 28831799 28831801 64 6924266 21.5 36.5 29.0 2.1 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_64_25365001 chr3R_25365001 RAL-57 2192 chr3R 21907534 21907536 chr3R 28831802 28831802 53 6924267 21.5 36.0 28.8 1.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_53_25365001 chr3R_25365001 RAL-57 2193 chr3R 28950234 28950275 chr3R 28950339 28950384 9 107 4.0 5.0 4.5 1.6 150 chr3R 28950234 intron CG14521 - chr3R 28950309 intron CG14521 - chr3R 28950384 intron CG14521 - chr3R_9_28950001 chr3R_28950001 RAL-57 2194 chr3R 28960486 28960541 chr3R 28960596 28960651 14 110 3.0 7.5 5.2 2.3 165 chr3R 28960486 intron CG14521 - chr3R 28960568 intron CG14521 - chr3R 28960651 intron CG14521 - chr3R_14_28960001 chr3R_28960001 RAL-57 2195 chr3R 28971147 28971184 chr3R 28971253 28971290 11 106 3.5 1.0 2.2 3.4 143 chr3R 28971147 5` UTR CR45669 + chr3R 28971218 5` UTR CR45669 + chr3R 28971290 5` UTR CR45669 + chr3R_11_28970001 chr3R_28970001 RAL-57 2196 chr3R 29009931 29009983 chr3R 29010061 29010113 13 129 3.0 6.0 4.5 2.4 182 chr3R 29009931 intron wat - chr3R 29010022 intron wat - chr3R 29010113 intron wat - chr3R_13_29010001 chr3R_29010001 RAL-57 2197 chr3R 21907534 21907536 chr3R 29013339 29013339 15 7105804 21.5 15.0 18.2 0.8 7105805 chr3R 21907534 intergenic CG6678 + chr3R 25460436 intron Fur1 - chr3R 29013339 intron wat - chr3R_15_25460001 chr3R_25460001 RAL-57 2198 chr3R 21907534 21907536 chr3R 29013340 29013340 18 7105806 21.5 14.0 17.8 1.0 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_18_25460001 chr3R_25460001 RAL-57 2199 chr3R 29053998 29054049 chr3R 29054099 29054147 24 99 9.0 7.5 8.2 2.6 149 chr3R 29053998 intergenic CG11842 +,CG11843 + chr3R 29054072 intergenic CG11842 +,CG11843 + chr3R 29054147 intergenic CG11843 +,CG11842 + chr3R_24_29050001 chr3R_29050001 RAL-57 2200 chr3R 29079366 29079401 chr3R 29080763 29080797 NOF 9 1396 6.5 5.5 6.0 1.3 1431 chr3R 29079366 intron CG11873 + chr3R 29080082 intron CG11873 + chr3R 29080797 intron CG11873 + chr3R_9_29080001 chr3R_29080001 RAL-57 2201 chr3R 29128513 29128515 chr3R 29128627 29128630 4 115 0.0 10.0 5.0 0.7 117 chr3R 29128513 intergenic dgt6 -,CG11880 + chr3R 29128572 intergenic dgt6 -,CG11880 + chr3R 29128630 3` UTR dgt6 - chr3R_4_29125001 chr3R_29125001 RAL-57 2202 chr3R 29213034 29213090 chr3R 29213142 29213198 13 108 2.5 1.5 2.0 4.3 164 chr3R 29213034 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213198 intergenic not near genes chr3R_13_29210001 chr3R_29210001 RAL-57 2203 chr3R 29237258 29237536 chr3R 29239303 29239454 6 2019 12.0 8.0 10.0 0.5 2196 chr3R 29237258 exon CG11951 - chr3R 29238356 intron CG11951 - chr3R 29239454 exon CG31427 - chr3R_6_29235001 chr3R_29235001 RAL-57 2204 chr3R 29238753 29238778 chr3R 29238892 29238917 9 138 3.5 2.0 2.8 2.4 164 chr3R 29238753 intergenic CG11951 -,CG31427 - chr3R 29238835 3` UTR CG31427 - chr3R 29238917 3` UTR CG31427 - chr3R_9_29235001 chr3R_29235001 RAL-57 2205 chr3R 29237521 29237534 chr3R 29239406 29239418 5 1885 12.5 6.5 9.5 0.5 1897 chr3R 29237521 exon CG11951 - chr3R 29238470 intron CG11951 - chr3R 29239418 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-57 2206 chr3R 29240450 29240493 chr3R 29240558 29240602 6 109 1.0 1.0 1.0 3.0 152 chr3R 29240450 intergenic CG31427 -,CG31445 - chr3R 29240526 intergenic CG31445 -,CG31427 - chr3R 29240602 3` UTR CG31445 - chr3R_6_29240001 chr3R_29240001 RAL-57 2207 chr3R 29256245 29256292 chr3R 29256344 29256379 25 101 5.5 6.0 5.8 3.7 134 chr3R 29256245 intergenic CG45544 +,stg - chr3R 29256312 intergenic CG45544 + chr3R 29256379 intergenic CG45544 + chr3R_25_29255001 chr3R_29255001 RAL-57 2208 chr3R 29264186 29264211 chr3R 29264313 29264338 6 127 0.0 3.5 1.8 2.1 152 chr3R 29264186 intergenic not near genes chr3R 29264262 intergenic not near genes chr3R 29264338 intergenic not near genes chr3R_6_29260001 chr3R_29260001 RAL-57 2209 chr3R 29319825 29319850 chr3R 29320169 29320194 jockey 11 344 3.5 12.5 8.0 1.2 369 chr3R 29319825 intergenic Cnx99A - chr3R 29320010 intergenic Cnx99A - chr3R 29320194 intergenic not near genes chr3R_11_29320001 chr3R_29320001 RAL-57 2210 chr3R 29355958 29355983 chr3R 29356040 29356088 7 101 2.5 2.5 2.5 2.0 130 chr3R 29355958 intergenic CR45547 - chr3R 29356023 intergenic CR45547 - chr3R 29356088 intergenic CR45547 - chr3R_7_29355001 chr3R_29355001 RAL-57 2211 chr3R 29375983 29376224 chr3R 29376069 29376325 24 97 5.5 9.0 7.2 2.9 342 chr3R 29375983 intergenic not near genes chr3R 29376154 intergenic not near genes chr3R 29376325 intergenic not near genes chr3R_24_29375001 chr3R_29375001 RAL-57 2212 chr3R 29406611 29406614 chr3R 29407905 29407924 jockey 5 1306 21.0 13.0 17.0 0.3 1313 chr3R 29406611 intron Ptp99A + chr3R 29407268 intron Ptp99A + chr3R 29407924 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-57 2213 chr3R 29406615 29406643 chr3R 29407900 29407907 jockey 29 1300 12.0 12.5 12.2 2.2 1292 chr3R 29406615 intron Ptp99A + chr3R 29407261 intron Ptp99A + chr3R 29407907 intron Ptp99A + chr3R_29_29405001 chr3R_29405001 RAL-57 2214 chr3R 29447794 29447832 chr3R 29447926 29447964 5 129 3.5 2.5 3.0 1.2 170 chr3R 29447794 intron Ptp99A + chr3R 29447879 intron Ptp99A + chr3R 29447964 intron Ptp99A + chr3R_5_29445001 chr3R_29445001 RAL-57 2215 chr3R 29449359 29449381 chr3R 29449462 29449484 4 103 1.0 1.0 1.0 2.0 125 chr3R 29449359 intron Ptp99A + chr3R 29449422 intron Ptp99A + chr3R 29449484 intron Ptp99A + chr3R_4_29445001 chr3R_29445001 RAL-57 2216 chr3R 29472003 29472017 chr3R 29472121 29472135 5 116 2.5 4.0 3.2 1.2 132 chr3R 29472003 intron Ptp99A + chr3R 29472069 intron Ptp99A + chr3R 29472135 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-57 2217 chr3R 29539410 29539441 chr3R 29539508 29539539 12 98 2.5 0.0 1.2 5.5 129 chr3R 29539410 intergenic not near genes chr3R 29539474 intergenic not near genes chr3R 29539539 intergenic not near genes chr3R_12_29535001 chr3R_29535001 RAL-57 2218 chr3R 29576743 29576996 chr3R 29576869 29577102 4 121 6.5 0.0 3.2 1.0 359 chr3R 29576743 intergenic not near genes chr3R 29576922 intergenic not near genes chr3R 29577102 intergenic not near genes chr3R_4_29575001 chr3R_29575001 RAL-57 2219 chr3R 29589429 29589466 chr3R 29589559 29589613 17 133 38.5 37.5 38.0 0.4 184 chr3R 29589429 exon CG11470 - chr3R 29589521 exon CG11470 - chr3R 29589613 exon CG11470 - chr3R_17_29585001 chr3R_29585001 RAL-57 2220 chr3R 29588845 29588898 chr3R 29590001 29590054 10 1163 18.0 34.0 26.0 0.4 1209 chr3R 29588845 intergenic CG11470 - chr3R 29589450 exon CG11470 - chr3R 29590054 intergenic CG31041 -,CG11470 - chr3R_10_29585001 chr3R_29585001 RAL-57 2221 chr3R 29604098 29604129 chr3R 29604202 29604217 8 98 5.0 0.0 2.5 2.3 119 chr3R 29604098 intron alph + chr3R 29604158 intron alph + chr3R 29604217 intron alph + chr3R_8_29600001 chr3R_29600001 RAL-57 2222 chr3R 29618769 29618775 chr3R 29618873 29618879 5 105 12.0 2.0 7.0 0.6 110 chr3R 29618769 intergenic CG1907 + chr3R 29618824 intergenic CG1907 + chr3R 29618879 intergenic CG1907 + chr3R_5_29615001 chr3R_29615001 RAL-57 2223 chr3R 29627260 29627290 chr3R 29627696 29627725 9 430 12.5 4.0 8.2 1.0 465 chr3R 29627260 intergenic not near genes chr3R 29627492 intergenic not near genes chr3R 29627725 intergenic not near genes chr3R_9_29625001 chr3R_29625001 RAL-57 2224 chr3R 29627292 29627313 chr3R 29627695 29627739 8 420 5.5 3.5 4.5 1.5 447 chr3R 29627292 intergenic not near genes chr3R 29627516 intergenic not near genes chr3R 29627739 intergenic not near genes chr3R_8_29625001 chr3R_29625001 RAL-57 2225 chr3R 29655630 29655662 chr3R 29655731 29655766 7 103 9.5 0.0 4.8 1.2 136 chr3R 29655630 intron Dop1R2 - chr3R 29655698 intron Dop1R2 - chr3R 29655766 intron Dop1R2 - chr3R_7_29655001 chr3R_29655001 RAL-57 2226 chr3R 29719377 29719430 chr3R 29719488 29719541 28 110 5.5 4.5 5.0 4.7 164 chr3R 29719377 intron CG15506 + chr3R 29719459 intron CG15506 + chr3R 29719541 intron CG15506 + chr3R_28_29715001 chr3R_29715001 RAL-57 2227 chr3R 29758912 29758971 chr3R 29759015 29759074 43 99 6.0 8.5 7.2 5.2 162 chr3R 29758912 3` UTR CR44953 - chr3R 29758993 3` UTR CR44953 - chr3R 29759074 intergenic CR44953 - chr3R_43_29755001 chr3R_29755001 RAL-57 2228 chr3R 29760336 29760379 chr3R 29761562 29761605 pogo 12 1225 4.5 6.0 5.2 1.9 1269 chr3R 29760336 intergenic not near genes chr3R 29760970 intergenic not near genes chr3R 29761605 intergenic not near genes chr3R_12_29760001 chr3R_29760001 RAL-57 2229 chr3R 29880983 29881036 chr3R 29881094 29881147 26 111 3.5 6.5 5.0 4.3 164 chr3R 29880983 intron CG31038 + chr3R 29881065 intron CG31038 + chr3R 29881147 intron CG31038 + chr3R_26_29880001 chr3R_29880001 RAL-57 2230 chr3R 29881999 29882047 chr3R 29891181 29891229 roo 21 9182 6.5 9.5 8.0 2.3 9230 chr3R 29881999 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891229 intron CG31038 + chr3R_21_29885001 chr3R_29885001 RAL-57 2231 chr3R 29963483 29963489 chr3R 29963592 29963614 6 122 1.5 4.5 3.0 1.5 131 chr3R 29963483 intron TkR99D - chr3R 29963548 intron TkR99D - chr3R 29963614 intron TkR99D - chr3R_6_29960001 chr3R_29960001 RAL-57 2232 chr3R 30032136 30032154 chr3R 30032240 30032258 8 104 30.0 10.5 20.2 0.4 122 chr3R 30032136 intron Axn + chr3R 30032197 intron Axn + chr3R 30032258 intron Axn + chr3R_8_30030001 chr3R_30030001 RAL-57 2233 chr3R 30061455 30061493 chr3R 30061579 30061619 17 126 5.5 4.5 5.0 2.8 164 chr3R 30061455 intron sima + chr3R 30061537 intron sima + chr3R 30061619 intron sima + chr3R_17_30060001 chr3R_30060001 RAL-57 2234 chr3R 30106345 30106413 chr3R 30106492 30106520 13 130 0.0 6.0 3.0 3.2 175 chr3R 30106345 intron sima + chr3R 30106432 intron sima + chr3R 30106520 intron sima + chr3R_13_30105001 chr3R_30105001 RAL-57 2235 chr3R 30124963 30124980 chr3R 30125046 30125069 4 86 2.5 2.5 2.5 1.1 106 chr3R 30124963 intergenic CG45073 - chr3R 30125016 intergenic CG45073 - chr3R 30125069 intergenic CG45073 - chr3R_4_30125001 chr3R_30125001 RAL-57 2236 chr3R 30181330 30181359 chr3R 30181441 30181479 6 114 4.0 0.5 2.2 1.9 149 chr3R 30181330 3` UTR Bet5 + chr3R 30181404 3` UTR Bet5 + chr3R 30181479 3` UTR Bet5 + chr3R_6_30180001 chr3R_30180001 RAL-57 2237 chr3R 30203365 30203387 chr3R 30203469 30203491 9 102 3.0 4.0 3.5 2.0 126 chr3R 30203365 intergenic CG9743 - chr3R 30203428 intergenic CG9743 - chr3R 30203491 intergenic CG9743 - chr3R_9_30200001 chr3R_30200001 RAL-57 2238 chr3R 30210593 30210674 chr3R 30210731 30210779 5 111 0.0 4.0 2.0 1.7 186 chr3R 30210593 intergenic Anp +,CecA1 + chr3R 30210686 intergenic CecA1 +,Anp + chr3R 30210779 intergenic CecA1 +,Anp + chr3R_5_30210001 chr3R_30210001 RAL-57 2239 chr3R 30330470 30330523 chr3R 30330574 30330595 12 93 2.5 5.5 4.0 2.4 125 chr3R 30330470 intron hdc + chr3R 30330532 intron hdc + chr3R 30330595 intron hdc + chr3R_12_30330001 chr3R_30330001 RAL-57 2240 chr3R 30396195 30396244 chr3R 30404485 30404535 roo 24 8290 9.0 10.5 9.8 2.2 8340 chr3R 30396195 intergenic not near genes chr3R 30400365 intergenic not near genes chr3R 30404535 5` UTR CR45570 + chr3R_24_30400001 chr3R_30400001 RAL-57 2241 chr3R 30422917 30422926 chr3R 30423037 30423049 4 122 18.0 2.5 10.2 0.4 132 chr3R 30422917 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30422983 intergenic CG2217 -,CG42740 -,CG15535 - chr3R 30423049 3` UTR CG15535 - chr3R_4_30420001 chr3R_30420001 RAL-57 2242 chr3R 30422932 30422967 chr3R 30423035 30423090 16 115 8.0 2.5 5.2 2.6 158 chr3R 30422932 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30423011 intergenic CG15535 -,CG2217 -,CG42740 - chr3R 30423090 3` UTR CG15535 - chr3R_16_30420001 chr3R_30420001 RAL-57 2243 chr3R 30456378 30456419 chr3R 30456478 30456524 17 105 2.0 7.5 4.8 2.9 146 chr3R 30456378 intergenic CG2224 - chr3R 30456451 3` UTR CG2224 - chr3R 30456524 3` UTR CG2224 - chr3R_17_30455001 chr3R_30455001 RAL-57 2244 chr3R 30457990 30458048 chr3R 30458095 30458153 36 104 6.5 9.0 7.8 4.1 163 chr3R 30457990 intron CG2224 - chr3R 30458072 intron CG2224 - chr3R 30458153 intron CG2224 - chr3R_36_30455001 chr3R_30455001 RAL-57 2245 chr3R 30480453 30480509 chr3R 30482940 30482988 jockey 20 2485 4.0 8.0 6.0 2.9 2535 chr3R 30480453 intron PH4alphaEFB + chr3R 30481720 intron PH4alphaEFB + chr3R 30482988 intron PH4alphaEFB + chr3R_20_30480001 chr3R_30480001 RAL-57 2246 chr3R 30488098 30488116 chr3R 30488202 30488220 17 104 9.0 0.0 4.5 3.1 122 chr3R 30488098 intergenic Jon99Fii - chr3R 30488159 intergenic Jon99Fii - chr3R 30488220 intergenic Jon99Fii - chr3R_17_30485001 chr3R_30485001 RAL-57 2247 chr3R 30571676 30571713 chr3R 30571781 30571818 8 105 1.5 3.5 2.5 2.3 142 chr3R 30571676 intron tmod + chr3R 30571747 intron tmod + chr3R 30571818 exon tmod + chr3R_8_30570001 chr3R_30570001 RAL-57 2248 chr3R 30591293 30591339 chr3R 30591427 30591466 13 127 5.0 3.0 4.0 2.6 173 chr3R 30591293 intergenic not near genes chr3R 30591380 intergenic not near genes chr3R 30591466 intergenic not near genes chr3R_13_30590001 chr3R_30590001 RAL-57 2249 chr3R 30627594 30627615 chr3R 30627691 30627720 4 102 3.0 5.5 4.2 0.8 126 chr3R 30627594 3` UTR CG2267 - chr3R 30627657 exon CG2267 - chr3R 30627720 exon CG2267 - chr3R_4_30625001 chr3R_30625001 RAL-57 2250 chr3R 30627616 30627634 chr3R 30627682 30627739 6 98 1.0 4.0 2.5 1.7 123 chr3R 30627616 exon CG2267 - chr3R 30627678 exon CG2267 - chr3R 30627739 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-57 2251 chr3R 30700848 30700875 chr3R 30700995 30701023 7 148 1.5 0.0 0.8 3.9 175 chr3R 30700848 intergenic not near genes chr3R 30700936 intergenic not near genes chr3R 30701023 intergenic not near genes chr3R_7_30700001 chr3R_30700001 RAL-57 2252 chr3R 30791892 30791894 chr3R 30792033 30792035 4 141 36.0 21.5 28.8 0.1 143 chr3R 30791892 exon wts - chr3R 30791964 intron wts - chr3R 30792035 exon wts - chr3R_4_30790001 chr3R_30790001 RAL-57 2253 chr3R 30791902 30791908 chr3R 30792028 30792031 4 132 30.0 18.0 24.0 0.2 129 chr3R 30791902 exon wts - chr3R 30791966 intron wts - chr3R 30792031 exon wts - chr3R_4_30790001 chr3R_30790001 RAL-57 2254 chr3R 30791909 30791942 chr3R 30792022 30792058 35 132 15.0 15.5 15.2 2.2 149 chr3R 30791909 exon wts - chr3R 30791984 intron wts - chr3R 30792058 exon wts - chr3R_35_30790001 chr3R_30790001 RAL-57 2255 chr3R 30818787 30818840 chr3R 30820377 30820430 1360 36 1589 11.0 8.5 9.8 3.3 1643 chr3R 30818787 intron cindr + chr3R 30819608 intron cindr + chr3R 30820430 intron cindr + chr3R_36_30815001 chr3R_30815001 RAL-57 2256 chr3R 31000210 31000255 chr3R 31000387 31000417 4 176 5.0 4.5 4.8 0.7 207 chr3R 31000210 intron 5-HT7 - chr3R 31000314 intron 5-HT7 - chr3R 31000417 intron 5-HT7 - chr3R_4_31000001 chr3R_31000001 RAL-57 2257 chr3R 31026471 31026520 chr3R 31026571 31026625 6 103 2.0 2.5 2.2 1.9 154 chr3R 31026471 intergenic not near genes chr3R 31026548 intergenic not near genes chr3R 31026625 intergenic not near genes chr3R_6_31025001 chr3R_31025001 RAL-57 2258 chr3R 31042085 31042142 chr3R 31042197 31042226 23 110 10.0 7.0 8.5 2.4 141 chr3R 31042085 intron CanA1 + chr3R 31042156 intron CanA1 + chr3R 31042226 intron CanA1 + chr3R_23_31040001 chr3R_31040001 RAL-57 2259 chr3R 31070832 31070871 chr3R 31070935 31070958 8 101 4.0 1.5 2.8 2.1 126 chr3R 31070832 intron Sox100B + chr3R 31070895 intron Sox100B + chr3R 31070958 intron Sox100B + chr3R_8_31070001 chr3R_31070001 RAL-57 2260 chr3R 31074213 31074258 chr3R 31081831 31081881 springer 13 7623 10.0 8.0 9.0 1.3 7668 chr3R 31074213 intron Sox100B + chr3R 31078047 intron Sox100B + chr3R 31081881 intron Sox100B + chr3R_13_31075001 chr3R_31075001 RAL-57 2261 chr3R 31279381 31279401 chr3R 31285587 31285617 diver 6 6214 1.5 6.0 3.8 1.2 6236 chr3R 31279381 intergenic not near genes chr3R 31282499 intergenic not near genes chr3R 31285617 intergenic not near genes chr3R_6_31280001 chr3R_31280001 RAL-57 2262 chr3R 31412690 31412738 chr3R 31412808 31412856 6 118 2.0 2.0 2.0 2.0 166 chr3R 31412690 intron Gprk2 + chr3R 31412773 intron Gprk2 + chr3R 31412856 intron Gprk2 + chr3R_6_31410001 chr3R_31410001 RAL-57 2263 chr3R 31413067 31413102 chr3R 31418291 31418326 copia 5 5224 3.0 1.0 2.0 1.7 5259 chr3R 31413067 intron Gprk2 + chr3R 31415696 intron Gprk2 + chr3R 31418326 intron Gprk2 + chr3R_5_31415001 chr3R_31415001 RAL-57 2264 chr3R 31426892 31426899 chr3R 31427008 31427016 4 116 1.5 2.0 1.8 1.4 124 chr3R 31426892 intron Gprk2 + chr3R 31426954 intron Gprk2 + chr3R 31427016 intron Gprk2 + chr3R_4_31425001 chr3R_31425001 RAL-57 2265 chr3R 31435337 31435391 chr3R 31435513 31435568 40 176 10.0 7.0 8.5 4.2 231 chr3R 31435337 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435568 intron Gprk2 + chr3R_40_31435001 chr3R_31435001 RAL-57 2266 chr3R 31442245 31442293 chr3R 31442355 31442403 19 110 4.0 4.0 4.0 3.8 158 chr3R 31442245 intron Gprk2 + chr3R 31442324 intron Gprk2 + chr3R 31442403 intron Gprk2 + chr3R_19_31440001 chr3R_31440001 RAL-57 2267 chr3R 31446063 31446078 chr3R 31446177 31446193 5 115 5.0 1.0 3.0 1.2 130 chr3R 31446063 intron Gprk2 + chr3R 31446128 intron Gprk2 + chr3R 31446193 intron Gprk2 + chr3R_5_31445001 chr3R_31445001 RAL-57 2268 chr3R 31448613 31448627 chr3R 31448690 31448725 4 89 8.0 7.0 7.5 0.5 112 chr3R 31448613 intron Gprk2 + chr3R 31448669 intron Gprk2 + chr3R 31448725 intron Gprk2 + chr3R_4_31445001 chr3R_31445001 RAL-57 2269 chr3R 31664042 31664073 chr3R 31664453 31664474 4 406 26.5 37.0 31.8 0.1 432 chr3R 31664042 3` UTR kek6 + chr3R 31664258 3` UTR kek6 + chr3R 31664474 3` UTR kek6 + chr3R_4_31660001 chr3R_31660001 RAL-57 2270 chr3R 31691511 31691561 chr3R 31696302 31696351 Doc 25 4788 7.0 12.5 9.8 2.3 4840 chr3R 31691511 intergenic not near genes chr3R 31693931 intergenic not near genes chr3R 31696351 intergenic not near genes chr3R_25_31690001 chr3R_31690001 RAL-57 2271 chr3R 31711419 31711459 chr3R 31711833 31711873 11 413 6.0 4.5 5.2 1.8 454 chr3R 31711419 intergenic not near genes chr3R 31711646 intergenic not near genes chr3R 31711873 intergenic not near genes chr3R_11_31710001 chr3R_31710001 RAL-57 2272 chr3R 31774849 31774887 chr3R 31775019 31775057 13 167 8.0 4.5 6.2 1.8 208 chr3R 31774849 3` UTR sip3 + chr3R 31774953 3` UTR sip3 + chr3R 31775057 3` UTR,3` UTR sip3 +,CG2126 - chr3R_13_31770001 chr3R_31770001 RAL-57 2273 chr3R 31828830 31828882 chr3R 31828944 31828996 9 112 3.5 5.0 4.2 1.7 166 chr3R 31828830 intron RhoGAP100F + chr3R 31828913 intron RhoGAP100F + chr3R 31828996 intron RhoGAP100F + chr3R_9_31825001 chr3R_31825001 RAL-57 2274 chr3R 31829275 31829329 chr3R 31829872 31829926 14 596 5.0 8.5 6.8 1.8 651 chr3R 31829275 intron RhoGAP100F + chr3R 31829600 intron RhoGAP100F + chr3R 31829926 intron RhoGAP100F + chr3R_14_31825001 chr3R_31825001 RAL-57 2275 chr3R 31856988 31857011 chr3R 31857145 31857182 4 160 2.0 3.0 2.5 1.1 194 chr3R 31856988 intron heph - chr3R 31857085 intron heph - chr3R 31857182 intron heph - chr3R_4_31855001 chr3R_31855001 RAL-57 2276 chr3R 31858745 31858783 chr3R 31858830 31858894 6 94 4.0 1.5 2.8 1.6 149 chr3R 31858745 intron heph - chr3R 31858820 intron heph - chr3R 31858894 intron heph - chr3R_6_31855001 chr3R_31855001 RAL-57 2277 chr3R 31930875 31930936 chr3R 31930999 31931045 45 123 5.5 3.0 4.2 8.7 170 chr3R 31930875 intron heph - chr3R 31930960 intron heph - chr3R 31931045 intron heph - chr3R_45_31930001 chr3R_31930001 RAL-57 2278 chr3R 31961352 31961366 chr3R 31961430 31961474 4 88 1.0 2.5 1.8 1.4 122 chr3R 31961352 intron heph - chr3R 31961413 intron heph - chr3R 31961474 intron heph - chr3R_4_31960001 chr3R_31960001 RAL-57 2279 chr3R 31962071 31962082 chr3R 31962383 31962413 5 326 3.0 0.0 1.5 2.0 342 chr3R 31962071 intron heph - chr3R 31962242 intron heph - chr3R 31962413 intron heph - chr3R_5_31960001 chr3R_31960001 RAL-57 2280 chr3R 31997988 31998012 chr3R 32005483 32005494 blood 5 7491 0.0 2.0 1.0 2.5 7506 chr3R 31997988 intron heph - chr3R 32001741 intron heph - chr3R 32005494 intron heph - chr3R_5_32000001 chr3R_32000001 RAL-57 2281 chr3R 32043354 32043369 chr3R 32043528 32043565 5 180 6.0 5.5 5.8 0.7 211 chr3R 32043354 intergenic not near genes chr3R 32043460 intergenic not near genes chr3R 32043565 intergenic not near genes chr3R_5_32040001 chr3R_32040001 RAL-57 2282 chr4 654347 654394 chr4 654455 654502 11 108 3.5 3.5 3.5 2.4 155 chr4 654347 intron gw - chr4 654424 intron gw - chr4 654502 intron gw - chr4_11_650001 chr4_650001 RAL-57 2283 chr4 905538 905592 chr4 905645 905699 7 107 2.5 0.5 1.5 2.8 161 chr4 905538 5` UTR unc-13 - chr4 905618 5` UTR unc-13 - chr4 905699 5` UTR unc-13 - chr4_7_905001 chr4_905001 RAL-57 2284 chrX 318459 318475 chrX 323570 323586 flea 4 5111 2.5 2.5 2.5 1.1 5127 chrX 318459 intron,intron CG3777 +,CG32816 - chrX 321022 intron,intron CG3777 +,CG32816 - chrX 323586 intron,intron CG3777 +,CG32816 - chrX_4_320001 chrX_320001 RAL-57 2285 chrX 536316 536335 chrX 536966 536978 4 645 12.0 2.0 7.0 0.5 662 chrX 536316 intron Appl + chrX 536647 intron Appl + chrX 536978 intron Appl + chrX_4_535001 chrX_535001 RAL-57 2286 chrX 551405 551435 chrX 558990 559021 412 5 7586 4.0 3.0 3.5 1.1 7616 chrX 551405 intron Appl + chrX 555213 intron Appl + chrX 559021 intron Appl + chrX_5_555001 chrX_555001 RAL-57 2287 chrX 617961 618005 chrX 618065 618103 18 104 6.5 4.0 5.2 2.9 142 chrX 617961 intron CG13366 - chrX 618032 intron CG13366 - chrX 618103 intron CG13366 - chrX_18_615001 chrX_615001 RAL-57 2288 chrX 667639 667684 chrX 667748 667793 10 109 1.0 0.0 0.5 6.7 154 chrX 667639 intergenic not near genes chrX 667716 intergenic not near genes chrX 667793 intergenic not near genes chrX_10_665001 chrX_665001 RAL-57 2289 chrX 670226 670283 chrX 670342 670387 4 108 0.5 2.0 1.2 1.8 161 chrX 670226 intergenic not near genes chrX 670306 intergenic not near genes chrX 670387 intergenic not near genes chrX_4_670001 chrX_670001 RAL-57 2290 chrX 680816 680866 chrX 680924 680972 7 98 2.0 5.0 3.5 1.6 156 chrX 680816 intergenic not near genes chrX 680894 intergenic not near genes chrX 680972 intergenic not near genes chrX_7_680001 chrX_680001 RAL-57 2291 chrX 778129 778155 chrX 778222 778270 8 112 4.0 0.5 2.2 2.5 141 chrX 778129 intron fz3 + chrX 778200 intron fz3 + chrX 778270 intron fz3 + chrX_8_775001 chrX_775001 RAL-57 2292 chrX 776969 777006 chrX 778824 778879 16 1858 22.5 24.5 23.5 0.7 1910 chrX 776969 intron fz3 + chrX 777924 intron fz3 + chrX 778879 intron fz3 + chrX_16_775001 chrX_775001 RAL-57 2293 chrX 806761 806814 chrX 806878 806933 20 116 8.5 9.0 8.8 2.0 172 chrX 806761 intron Sec22 + chrX 806847 intron Sec22 + chrX 806933 intron Sec22 + chrX_20_805001 chrX_805001 RAL-57 2294 chrX 812251 812297 chrX 817901 817951 297 15 5652 3.0 4.5 3.8 3.1 5700 chrX 812251 intron CG43867 - chrX 815101 intron CG43867 - chrX 817951 intron CG43867 - chrX_15_815001 chrX_815001 RAL-57 2295 chrX 826359 826401 chrX 826545 826586 4 175 1.0 2.0 1.5 1.6 227 chrX 826359 intron CG43867 - chrX 826472 intron CG43867 - chrX 826586 intron CG43867 - chrX_4_825001 chrX_825001 RAL-57 2296 chrX 827580 827630 chrX 835397 835467 roo 7 7826 3.0 0.0 1.5 2.8 7887 chrX 827580 intron CG43867 - chrX 831524 intron CG43867 - chrX 835467 intron CG43867 - chrX_7_830001 chrX_830001 RAL-57 2297 chrX 906692 906719 chrX 908505 908532 S-element 9 1814 4.0 3.0 3.5 2.0 1840 chrX 906692 intron CG43867 - chrX 907612 intron CG43867 - chrX 908532 intron CG43867 - chrX_9_905001 chrX_905001 RAL-57 2298 chrX 975753 975791 chrX 975875 975878 6 117 1.5 2.5 2.0 2.0 125 chrX 975753 intergenic not near genes chrX 975816 intergenic not near genes chrX 975878 intergenic not near genes chrX_6_975001 chrX_975001 RAL-57 2299 chrX 1053117 1053120 chrX 16983076 16983077 15 15929957 15.0 8.0 11.5 1.2 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_15_9015001 chrX_9015001 RAL-57 2300 chrX 1063734 1063748 chrX 1072552 1072566 roo 8 8818 13.5 8.0 10.8 0.7 8832 chrX 1063734 intron CR44779 + chrX 1068150 intron CR44779 + chrX 1072566 intron CR44779 + chrX_8_1065001 chrX_1065001 RAL-57 2301 chrX 1084504 1084556 chrX 1085036 1085086 10 531 4.5 1.0 2.8 2.6 582 chrX 1084504 5` UTR,intron CR44779 +,CG3655 - chrX 1084795 5` UTR,intron CR44779 +,CG3655 - chrX 1085086 5` UTR,intron CR44779 +,CG3655 - chrX_10_1080001 chrX_1080001 RAL-57 2302 chrX 1253712 1253721 chrX 1253819 1253828 5 106 9.5 5.5 7.5 0.6 116 chrX 1253712 intron Atf3 - chrX 1253770 intron Atf3 - chrX 1253828 intron Atf3 - chrX_5_1250001 chrX_1250001 RAL-57 2303 chrX 1253724 1253764 chrX 1253814 1253871 21 106 3.0 5.0 4.0 4.2 147 chrX 1253724 intron Atf3 - chrX 1253798 intron Atf3 - chrX 1253871 intron Atf3 - chrX_21_1250001 chrX_1250001 RAL-57 2304 chrX 1301774 1301793 chrX 1301873 1301892 4 106 3.0 6.0 4.5 0.7 118 chrX 1301774 intron DAAM - chrX 1301833 intron DAAM - chrX 1301892 intron DAAM - chrX_4_1300001 chrX_1300001 RAL-57 2305 chrX 1357753 1357806 chrX 1367948 1368001 Doc 35 10194 7.0 14.0 10.5 3.0 10248 chrX 1357753 intergenic png - chrX 1362877 intergenic not near genes chrX 1368001 intergenic not near genes chrX_35_1360001 chrX_1360001 RAL-57 2306 chrX 1387006 1387033 chrX 1387107 1387135 8 102 24.0 16.5 20.2 0.4 129 chrX 1387006 intron CG32813 + chrX 1387070 intron CG32813 + chrX 1387135 intron CG32813 + chrX_8_1385001 chrX_1385001 RAL-57 2307 chrX 1497305 1497356 chrX 1497404 1497414 19 81 6.5 8.0 7.2 2.3 109 chrX 1497305 intron,intron inc +,Nmdar2 - chrX 1497360 intron,intron inc +,Nmdar2 - chrX 1497414 intron,intron inc +,Nmdar2 - chrX_19_1495001 chrX_1495001 RAL-57 2308 chrX 1518023 1518072 chrX 1523443 1523463 jockey 19 5416 5.0 6.0 5.5 2.9 5440 chrX 1518023 intergenic inc + chrX 1520743 intergenic not near genes chrX 1523463 intergenic not near genes chrX_19_1520001 chrX_1520001 RAL-57 2309 chrX 1560636 1560688 chrX 1560753 1560778 17 112 3.0 9.5 6.2 2.4 142 chrX 1560636 intron Mur2B - chrX 1560707 intron Mur2B - chrX 1560778 intron Mur2B - chrX_17_1560001 chrX_1560001 RAL-57 2310 chrX 1627964 1627974 chrX 1635444 1635455 gtwin 6 7485 22.5 17.0 19.8 0.3 7491 chrX 1627964 intron,intron Mur2B -,br + chrX 1631710 intron,intron Mur2B -,br + chrX 1635455 intron,intron Mur2B -,br + chrX_6_1630001 chrX_1630001 RAL-57 2311 chrX 1930514 1930568 chrX 1938110 1938110 opus 22 7590 3.0 3.5 3.2 5.2 7596 chrX 1930514 3` UTR CG11596 + chrX 1934312 intergenic not near genes chrX 1938110 3` UTR CG3857 - chrX_22_1930001 chrX_1930001 RAL-57 2312 chrX 1954862 1954916 chrX 1962826 1962863 Stalker2 17 7946 14.0 6.0 10.0 1.5 8001 chrX 1954862 intron Hr4 + chrX 1958862 intron Hr4 + chrX 1962863 intron Hr4 + chrX_17_1955001 chrX_1955001 RAL-57 2313 chrX 1963746 1963784 chrX 1963833 1963872 25 90 6.0 9.0 7.5 2.9 126 chrX 1963746 intron Hr4 + chrX 1963809 intron Hr4 + chrX 1963872 intron Hr4 + chrX_25_1960001 chrX_1960001 RAL-57 2314 chrX 2069347 2069359 chrX 2069472 2069480 4 124 13.5 6.0 9.8 0.4 133 chrX 2069347 intron,exon CG4199 -,CG4194 + chrX 2069414 intron,3` UTR CG4199 -,CG4194 + chrX 2069480 intron,3` UTR CG4199 -,CG4194 + chrX_4_2065001 chrX_2065001 RAL-57 2315 chrX 2069360 2069402 chrX 2069470 2069527 19 124 5.5 6.0 5.8 2.8 167 chrX 2069360 intron,exon CG4199 -,CG4194 + chrX 2069444 intron,3` UTR CG4199 -,CG4194 + chrX 2069527 intron,3` UTR CG4199 -,CG4194 + chrX_19_2065001 chrX_2065001 RAL-57 2316 chrX 2098619 2098635 chrX 2098697 2098701 5 83 7.0 11.5 9.2 0.5 82 chrX 2098619 intron csw + chrX 2098660 intron csw + chrX 2098701 intron csw + chrX_5_2095001 chrX_2095001 RAL-57 2317 chrX 2254448 2254486 chrX 2254539 2254543 4 86 6.5 9.0 7.8 0.5 95 chrX 2254448 3` UTR CG3078 - chrX 2254496 3` UTR CG3078 - chrX 2254543 3` UTR CG3078 - chrX_4_2250001 chrX_2250001 RAL-57 2318 chrX 2284187 2284231 chrX 2284276 2284320 21 89 9.0 5.5 7.2 2.6 133 chrX 2284187 intron CG2865 - chrX 2284254 intron CG2865 - chrX 2284320 intron CG2865 - chrX_21_2280001 chrX_2280001 RAL-57 2319 chrX 2399817 2399864 chrX 2408189 2408230 roo 16 8363 11.5 12.0 11.8 1.2 8413 chrX 2399817 intergenic not near genes chrX 2404024 intergenic not near genes chrX 2408230 intergenic not near genes chrX_16_2400001 chrX_2400001 RAL-57 2320 chrX 2429654 2429667 chrX 2429760 2429773 9 106 0.0 7.5 3.8 1.9 119 chrX 2429654 intergenic not near genes chrX 2429714 intergenic not near genes chrX 2429773 intergenic not near genes chrX_9_2425001 chrX_2425001 RAL-57 2321 chrX 2515134 2515175 chrX 2515263 2515297 12 127 5.0 5.0 5.0 2.0 163 chrX 2515134 intron trol - chrX 2515216 intron trol - chrX 2515297 intron trol - chrX_12_2515001 chrX_2515001 RAL-57 2322 chrX 2610367 2610414 chrX 2617507 2617556 HMS-Beagle 12 7142 10.0 7.0 8.5 1.3 7189 chrX 2610367 intergenic CG8636 - chrX 2613962 intergenic not near genes chrX 2617556 intergenic Tsp3A - chrX_12_2610001 chrX_2610001 RAL-57 2323 chrX 2664364 2664406 chrX 2665535 2665570 1360 13 1168 3.0 7.0 5.0 2.2 1206 chrX 2664364 intron sgg + chrX 2664967 intron sgg + chrX 2665570 intron sgg + chrX_13_2660001 chrX_2660001 RAL-57 2324 chrX 2892984 2893024 chrX 6610414 6610459 4 3717438 27.5 8.0 17.8 0.2 3717475 chrX 2892984 intron,intron kirre +,CG3526 + chrX 4751722 intergenic not near genes chrX 6610459 intron pigs + chrX_4_4750001 chrX_4750001 RAL-57 2325 chrX 2912172 2912172 chrX 16983076 16983077 10 14070905 14.0 8.0 11.0 0.8 14070905 chrX 2912172 intron kirre + chrX 9947624 intergenic not near genes chrX 16983077 intron CG45002 - chrX_10_9945001 chrX_9945001 RAL-57 2326 chrX 2959778 2959821 chrX 2959882 2959919 9 99 2.5 2.0 2.2 2.8 141 chrX 2959778 intron,intron kirre +,rst - chrX 2959848 intron,intron kirre +,rst - chrX 2959919 intron,intron kirre +,rst - chrX_9_2955001 chrX_2955001 RAL-57 2327 chrX 3031135 3031190 chrX 3031241 3031259 4 98 1.0 2.0 1.5 1.6 124 chrX 3031135 intron kirre + chrX 3031197 intron kirre + chrX 3031259 intron kirre + chrX_4_3030001 chrX_3030001 RAL-57 2328 chrX 3075608 3075661 chrX 3080940 3080992 Transpac 9 5331 0.5 2.0 1.2 4.1 5384 chrX 3075608 intron kirre + chrX 3078300 intron kirre + chrX 3080992 intron kirre + chrX_9_3075001 chrX_3075001 RAL-57 2329 chrX 3103462 3103473 chrX 3103572 3103584 5 110 6.0 1.0 3.5 1.1 122 chrX 3103462 intron kirre + chrX 3103523 intron kirre + chrX 3103584 intron kirre + chrX_5_3100001 chrX_3100001 RAL-57 2330 chrX 3203439 3203474 chrX 3203663 3203698 6 221 4.5 2.5 3.5 1.3 259 chrX 3203439 intron dnc + chrX 3203568 intron dnc + chrX 3203698 intron dnc + chrX_6_3200001 chrX_3200001 RAL-57 2331 chrX 3243624 3243657 chrX 3243735 3243772 10 114 3.5 10.0 6.8 1.3 148 chrX 3243624 intron dnc + chrX 3243698 intron dnc + chrX 3243772 intron dnc + chrX_10_3240001 chrX_3240001 RAL-57 2332 chrX 3398119 3398158 chrX 3398224 3398264 8 105 5.5 6.5 6.0 1.1 145 chrX 3398119 intron,intron CR44999 +,CG12535 - chrX 3398192 intron,intron CR44999 +,CG12535 - chrX 3398264 intron,intron CR44999 +,CG12535 - chrX_8_3395001 chrX_3395001 RAL-57 2333 chrX 3415011 3415048 chrX 3421221 3421258 3S18 6 6209 1.5 5.5 3.5 1.3 6247 chrX 3415011 intron,intron CR44999 +,CG12535 - chrX 3418134 intron,intron CR44999 +,CG12535 - chrX 3421258 intron,intron CR44999 +,CG12535 - chrX_6_3415001 chrX_3415001 RAL-57 2334 chrX 3597538 3597574 chrX 3619730 3619749 roo 6 22188 3.5 1.5 2.5 1.7 22211 chrX 3597538 intron AstA-R1 + chrX 3608644 intron AstA-R1 + chrX 3619749 intron AstA-R1 + chrX_6_3605001 chrX_3605001 RAL-57 2335 chrX 3713081 3713126 chrX 3713214 3713260 6 134 0.5 0.5 0.5 4.0 179 chrX 3713081 intron Rala - chrX 3713170 intron Rala - chrX 3713260 intron Rala - chrX_6_3710001 chrX_3710001 RAL-57 2336 chrX 3726738 3726794 chrX 3730160 3730190 NOF 10 3419 3.0 5.0 4.0 2.0 3452 chrX 3726738 intron tlk + chrX 3728464 intron tlk + chrX 3730190 intron tlk + chrX_10_3725001 chrX_3725001 RAL-57 2337 chrX 3768253 3768283 chrX 3768354 3768375 4 92 0.5 2.5 1.5 1.6 122 chrX 3768253 intron tlk + chrX 3768314 intron tlk + chrX 3768375 intron tlk + chrX_4_3765001 chrX_3765001 RAL-57 2338 chrX 3798053 3798070 chrX 3798149 3798162 12 102 6.5 20.0 13.2 0.8 109 chrX 3798053 intergenic not near genes chrX 3798108 intergenic not near genes chrX 3798162 intergenic not near genes chrX_12_3795001 chrX_3795001 RAL-57 2339 chrX 3881245 3881297 chrX 3881409 3881461 23 164 6.5 6.0 6.2 3.2 216 chrX 3881245 intron VhaAC39-1 + chrX 3881353 intron VhaAC39-1 + chrX 3881461 exon VhaAC39-1 + chrX_23_3880001 chrX_3880001 RAL-57 2340 chrX 3888477 3888497 chrX 3888579 3888600 10 103 0.0 11.0 5.5 1.5 123 chrX 3888477 intron CG15239 + chrX 3888538 intron CG15239 + chrX 3888600 intron CG15239 + chrX_10_3885001 chrX_3885001 RAL-57 2341 chrX 3899611 3899620 chrX 3899713 3899722 4 102 18.0 10.0 14.0 0.3 111 chrX 3899611 intron CG42541 - chrX 3899666 intron CG42541 - chrX 3899722 intron CG42541 - chrX_4_3895001 chrX_3895001 RAL-57 2342 chrX 3986837 3986883 chrX 3994495 3994541 412 12 7658 7.0 1.0 4.0 2.4 7704 chrX 3986837 intergenic not near genes chrX 3990689 intergenic not near genes chrX 3994541 intergenic not near genes chrX_12_3990001 chrX_3990001 RAL-57 2343 chrX 4067987 4067988 chrX 10754861 10754861 4 6686874 5.5 40.0 22.8 0.2 6686874 chrX 4067987 intergenic not near genes chrX 7411424 3` UTR CG42246 - chrX 10754861 intron Rph - chrX_4_7410001 chrX_7410001 RAL-57 2344 chrX 4115187 4115234 chrX 4115290 4115338 26 103 10.5 4.0 7.2 3.2 151 chrX 4115187 exon Tip60 - chrX 4115262 intron Tip60 - chrX 4115338 exon Tip60 - chrX_26_4115001 chrX_4115001 RAL-57 2345 chrX 4132644 4132698 chrX 4132837 4132891 14 191 3.5 7.0 5.2 2.3 247 chrX 4132644 3` UTR GlcAT-I + chrX 4132768 3` UTR GlcAT-I + chrX 4132891 3` UTR Fas2 - chrX_14_4130001 chrX_4130001 RAL-57 2346 chrX 4157872 4157903 chrX 4164950 4164981 297 10 7078 8.0 4.5 6.2 1.4 7109 chrX 4157872 intron Fas2 - chrX 4161426 intron Fas2 - chrX 4164981 intron Fas2 - chrX_10_4160001 chrX_4160001 RAL-57 2347 chrX 4186821 4186821 chrX 4617441 4617443 5 430621 13.5 35.0 24.2 0.2 430622 chrX 4186821 intron Fas2 - chrX 4402132 intron CR32773 - chrX 4617443 intergenic peb + chrX_5_4400001 chrX_4400001 RAL-57 2348 chrX 4186821 4186821 chrX 9312363 9312364 5 5125542 13.5 14.5 14.0 0.3 5125543 chrX 4186821 intron Fas2 - chrX 6749592 intron CG14439 + chrX 9312364 intergenic not near genes chrX_5_6745001 chrX_6745001 RAL-57 2349 chrX 4186822 4186822 chrX 4617441 4617443 7 430620 13.5 35.0 24.2 0.3 430621 chrX 4186822 intron Fas2 - chrX 4402132 intron CR32773 - chrX 4617443 intergenic peb + chrX_7_4400001 chrX_4400001 RAL-57 2350 chrX 4358063 4358105 chrX 4358190 4358232 25 126 8.5 0.0 4.2 4.8 169 chrX 4358063 intron norpA + chrX 4358148 intron norpA + chrX 4358232 intron norpA + chrX_25_4355001 chrX_4355001 RAL-57 2351 chrX 4361416 4361453 chrX 4361520 4361554 10 104 6.0 4.5 5.2 1.6 138 chrX 4361416 intron norpA + chrX 4361485 intron norpA + chrX 4361554 intron norpA + chrX_10_4360001 chrX_4360001 RAL-57 2352 chrX 4389377 4389379 chrX 12946233 12946234 15 8556857 3.5 13.0 8.2 1.6 8556857 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946234 3` UTR fne + chrX_15_8665001 chrX_8665001 RAL-57 2353 chrX 4396951 4396999 chrX 4397059 4397109 13 107 2.5 3.5 3.0 3.2 158 chrX 4396951 intron CR32773 - chrX 4397030 intron CR32773 - chrX 4397109 intron CR32773 - chrX_13_4395001 chrX_4395001 RAL-57 2354 chrX 4409118 4409161 chrX 4409227 4409271 5 107 4.5 1.5 3.0 1.2 153 chrX 4409118 intron CR32773 - chrX 4409194 intron CR32773 - chrX 4409271 intron CR32773 - chrX_5_4405001 chrX_4405001 RAL-57 2355 chrX 4468841 4468847 chrX 4468964 4468970 4 123 19.0 20.5 19.8 0.2 129 chrX 4468841 intron,intron CR32773 -,bi + chrX 4468906 intron,intron CR32773 -,bi + chrX 4468970 intron,intron CR32773 -,bi + chrX_4_4465001 chrX_4465001 RAL-57 2356 chrX 4574892 4574928 chrX 4574993 4575024 9 100 0.5 0.5 0.5 6.0 132 chrX 4574892 intron CR32773 - chrX 4574958 intron CR32773 - chrX 4575024 intron CR32773 - chrX_9_4570001 chrX_4570001 RAL-57 2357 chrX 4700366 4700422 chrX 4700734 4700790 jockey 11 368 4.0 4.5 4.2 2.1 424 chrX 4700366 3` UTR ctp + chrX 4700578 3` UTR ctp + chrX 4700790 3` UTR ctp + chrX_11_4700001 chrX_4700001 RAL-57 2358 chrX 4723550 4723586 chrX 4723653 4723673 29 102 22.0 11.5 16.8 1.6 123 chrX 4723550 exon Proc-R + chrX 4723612 intron Proc-R + chrX 4723673 intron Proc-R + chrX_29_4720001 chrX_4720001 RAL-57 2359 chrX 4731794 4731811 chrX 4736911 4736912 jockey 5 5114 3.5 3.5 3.5 1.1 5118 chrX 4731794 intergenic not near genes chrX 4734353 intergenic not near genes chrX 4736912 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-57 2360 chrX 4792360 4792391 chrX 4792814 4792844 jockey 7 456 4.0 3.5 3.8 1.5 484 chrX 4792360 intergenic not near genes chrX 4792602 intergenic not near genes chrX 4792844 intergenic not near genes chrX_7_4790001 chrX_4790001 RAL-57 2361 chrX 4827951 4827994 chrX 4835347 4835371 Stalker4 7 7380 4.5 3.0 3.8 1.5 7420 chrX 4827951 intergenic not near genes chrX 4831661 intergenic not near genes chrX 4835371 intergenic not near genes chrX_7_4830001 chrX_4830001 RAL-57 2362 chrX 4827996 4828001 chrX 4835344 4835372 Stalker4 6 7360 3.0 3.0 3.0 1.5 7376 chrX 4827996 intergenic not near genes chrX 4831684 intergenic not near genes chrX 4835372 intergenic not near genes chrX_6_4830001 chrX_4830001 RAL-57 2363 chrX 4864162 4864174 chrX 4864247 4864271 4 97 5.5 9.0 7.2 0.5 109 chrX 4864162 intron CG42594 + chrX 4864216 intron CG42594 + chrX 4864271 intron CG42594 + chrX_4_4860001 chrX_4860001 RAL-57 2364 chrX 5049561 5049611 chrX 5049674 5049685 16 110 3.5 2.0 2.8 4.2 124 chrX 5049561 intron,intron CR44833 -,ovo + chrX 5049623 intron,intron CR44833 -,ovo + chrX 5049685 intron,intron CR44833 -,ovo + chrX_16_5045001 chrX_5045001 RAL-57 2365 chrX 5096254 5096302 chrX 5103844 5103889 springer 14 7588 3.0 5.5 4.2 2.7 7635 chrX 5096254 intron,intron CG15465 +,rg + chrX 5100072 intron,intron CG15465 +,rg + chrX 5103889 intron,intron CG15465 +,rg + chrX_14_5100001 chrX_5100001 RAL-57 2366 chrX 5134788 5134825 chrX 5134914 5134951 7 126 2.5 3.0 2.8 1.8 163 chrX 5134788 intron,intron CG15465 +,rg + chrX 5134870 intron,intron CG15465 +,rg + chrX 5134951 intron,intron CG15465 +,rg + chrX_7_5130001 chrX_5130001 RAL-57 2367 chrX 5228109 5228121 chrX 5228248 5228257 5 137 5.0 7.0 6.0 0.7 148 chrX 5228109 intron,intron CG15465 +,rg + chrX 5228183 intron,intron CG15465 +,rg + chrX 5228257 intron,intron CG15465 +,rg + chrX_5_5225001 chrX_5225001 RAL-57 2368 chrX 5338684 5338735 chrX 5339962 5339991 jockey 25 1273 9.5 7.0 8.2 2.7 1307 chrX 5338684 intergenic not near genes chrX 5339338 intergenic not near genes chrX 5339991 intergenic SK + chrX_25_5335001 chrX_5335001 RAL-57 2369 chrX 5345392 5345422 chrX 5345506 5345558 7 133 0.0 5.0 2.5 2.0 166 chrX 5345392 intron SK + chrX 5345475 intron SK + chrX 5345558 intron SK + chrX_7_5345001 chrX_5345001 RAL-57 2370 chrX 5349255 5349309 chrX 5349357 5349411 10 102 7.0 7.5 7.2 1.2 156 chrX 5349255 intron SK + chrX 5349333 intron SK + chrX 5349411 intron SK + chrX_10_5345001 chrX_5345001 RAL-57 2371 chrX 5473561 5473598 chrX 5473662 5473699 5 97 1.0 1.0 1.0 2.5 138 chrX 5473561 intron SPR + chrX 5473630 intron SPR + chrX 5473699 intron SPR + chrX_5_5470001 chrX_5470001 RAL-57 2372 chrX 5524825 5524851 chrX 5528704 5528739 412 6 3882 12.5 1.0 6.8 0.8 3914 chrX 5524825 intergenic snoRNA:Psi28S-3342 - chrX 5526782 intergenic not near genes chrX 5528739 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 RAL-57 2373 chrX 5555345 5555395 chrX 5555494 5555518 17 136 6.5 6.0 6.2 2.4 173 chrX 5555345 intron Vsx2 - chrX 5555432 intron Vsx2 - chrX 5555518 intron Vsx2 - chrX_17_5555001 chrX_5555001 RAL-57 2374 chrX 5725007 5725059 chrX 5725135 5725186 26 127 6.5 8.0 7.2 3.2 179 chrX 5725007 intron CG32758 - chrX 5725096 intron CG32758 - chrX 5725186 intron CG32758 - chrX_26_5725001 chrX_5725001 RAL-57 2375 chrX 5727402 5727415 chrX 5732166 5732179 Doc 9 4763 11.0 7.5 9.2 0.9 4777 chrX 5727402 intron CG32758 - chrX 5729790 intron CG32758 - chrX 5732179 intron CG32758 - chrX_9_5725001 chrX_5725001 RAL-57 2376 chrX 5883795 5883837 chrX 5884050 5884103 pogo 21 265 6.5 4.0 5.2 3.4 308 chrX 5883795 intron CR45668 - chrX 5883949 intron CR45668 - chrX 5884103 intron CR45668 - chrX_21_5880001 chrX_5880001 RAL-57 2377 chrX 5884145 5884189 chrX 5884411 5884455 pogo 12 266 12.5 7.0 9.8 1.1 310 chrX 5884145 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884455 intron CR45668 - chrX_12_5880001 chrX_5880001 RAL-57 2378 chrX 5884073 5884115 chrX 5884444 5884487 pogo 13 372 22.0 15.0 18.5 0.7 414 chrX 5884073 intron CR45668 - chrX 5884280 intron CR45668 - chrX 5884487 intron CR45668 - chrX_13_5880001 chrX_5880001 RAL-57 2379 chrX 6071428 6071439 chrX 6071543 6071558 6 117 4.5 12.0 8.2 0.7 130 chrX 6071428 intron Tsp5D - chrX 6071493 intron Tsp5D - chrX 6071558 intron Tsp5D - chrX_6_6070001 chrX_6070001 RAL-57 2380 chrX 6171564 6171587 chrX 6179022 6179029 Quasimodo 6 7454 13.0 10.0 11.5 0.5 7465 chrX 6171564 intron Ca-alpha1T - chrX 6175296 intron Ca-alpha1T - chrX 6179029 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-57 2381 chrX 6171589 6171613 chrX 6179018 6179071 Quasimodo 14 7451 7.0 8.5 7.8 1.6 7482 chrX 6171589 intron Ca-alpha1T - chrX 6175330 intron Ca-alpha1T - chrX 6179071 intron Ca-alpha1T - chrX_14_6175001 chrX_6175001 RAL-57 2382 chrX 6215506 6215529 chrX 6215612 6215635 15 105 14.5 15.0 14.8 0.9 129 chrX 6215506 intergenic not near genes chrX 6215570 intergenic not near genes chrX 6215635 intergenic not near genes chrX_15_6215001 chrX_6215001 RAL-57 2383 chrX 6306526 6306579 chrX 6306628 6306680 8 102 2.5 2.0 2.2 2.5 154 chrX 6306526 3` UTR CG3823 + chrX 6306603 3` UTR CG3823 + chrX 6306680 3` UTR CG3823 + chrX_8_6305001 chrX_6305001 RAL-57 2384 chrX 6335215 6335233 chrX 6337733 6337768 Tirant 5 2532 1.0 4.5 2.8 1.3 2553 chrX 6335215 intergenic not near genes chrX 6336492 intergenic not near genes chrX 6337768 5` UTR CG3842 + chrX_5_6335001 chrX_6335001 RAL-57 2385 chrX 6388640 6388693 chrX 6388741 6388794 8 101 2.5 4.0 3.2 1.9 154 chrX 6388640 intergenic not near genes chrX 6388717 intergenic not near genes chrX 6388794 intergenic not near genes chrX_8_6385001 chrX_6385001 RAL-57 2386 chrX 6392853 6392894 chrX 6397643 6397684 Doc 8 4786 3.5 6.5 5.0 1.3 4831 chrX 6392853 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397684 intergenic not near genes chrX_8_6395001 chrX_6395001 RAL-57 2387 chrX 6470627 6470648 chrX 6470824 6470830 7 195 5.5 0.5 3.0 1.8 203 chrX 6470627 intron CG42340 - chrX 6470728 intron CG42340 - chrX 6470830 intron CG42340 - chrX_7_6470001 chrX_6470001 RAL-57 2388 chrX 6487961 6487977 chrX 6488062 6488083 7 103 11.5 12.5 12.0 0.5 122 chrX 6487961 intron CG42340 - chrX 6488022 intron CG42340 - chrX 6488083 intron CG42340 - chrX_7_6485001 chrX_6485001 RAL-57 2389 chrX 6497559 6497577 chrX 6498629 6498649 6 1081 2.5 8.5 5.5 0.9 1090 chrX 6497559 intron CG42340 - chrX 6498104 intron CG42340 - chrX 6498649 intron CG42340 - chrX_6_6495001 chrX_6495001 RAL-57 2390 chrX 6562797 6562850 chrX 6571304 6571338 Tirant 17 8503 5.5 7.5 6.5 2.3 8541 chrX 6562797 intron CG34417 + chrX 6567068 intron CG34417 + chrX 6571338 intron CG34417 + chrX_17_6565001 chrX_6565001 RAL-57 2391 chrX 6629772 6629794 chrX 6629884 6629906 4 112 4.0 1.5 2.8 1.1 134 chrX 6629772 intron pigs + chrX 6629839 intron pigs + chrX 6629906 intron pigs + chrX_4_6625001 chrX_6625001 RAL-57 2392 chrX 6733454 6733672 chrX 6733533 6733780 9 103 9.5 13.0 11.2 0.7 326 chrX 6733454 intron,intron CG3168 -,CR43461 + chrX 6733617 intron,intron CG3168 -,CR43461 + chrX 6733780 intron,intron CG3168 -,CR43461 + chrX_9_6730001 chrX_6730001 RAL-57 2393 chrX 6792072 6792090 chrX 6792183 6792201 4 111 4.0 4.5 4.2 0.8 129 chrX 6792072 intron C3G - chrX 6792136 intron C3G - chrX 6792201 intron C3G - chrX_4_6790001 chrX_6790001 RAL-57 2394 chrX 6814252 6814266 chrX 6814364 6814378 7 112 2.5 0.0 1.2 3.2 126 chrX 6814252 exon iav + chrX 6814315 intron iav + chrX 6814378 intron iav + chrX_7_6810001 chrX_6810001 RAL-57 2395 chrX 6865765 6865797 chrX 6865870 6865906 9 106 8.5 9.0 8.8 0.9 141 chrX 6865765 intron CG14434 - chrX 6865836 intron CG14434 - chrX 6865906 intron CG14434 - chrX_9_6865001 chrX_6865001 RAL-57 2396 chrX 6897573 6897583 chrX 7243794 7243804 7 346220 3.0 10.0 6.5 0.9 346231 chrX 6897573 intergenic not near genes chrX 7070688 exon CG4607 + chrX 7243804 intron CR44357 - chrX_7_7070001 chrX_7070001 RAL-57 2397 chrX 6897664 6897692 chrX 6897799 6897826 4 134 2.5 1.0 1.8 1.4 162 chrX 6897664 intergenic not near genes chrX 6897745 intergenic not near genes chrX 6897826 intergenic not near genes chrX_4_6895001 chrX_6895001 RAL-57 2398 chrX 6901370 6901385 chrX 6901467 6901486 5 100 3.5 1.5 2.5 1.4 116 chrX 6901370 intergenic not near genes chrX 6901428 intergenic not near genes chrX 6901486 intergenic not near genes chrX_5_6900001 chrX_6900001 RAL-57 2399 chrX 7023578 7023630 chrX 7030993 7031025 Tabor 16 7411 2.0 3.5 2.8 4.2 7447 chrX 7023578 intron CG12541 - chrX 7027302 intron CG12541 - chrX 7031025 intron CG12541 - chrX_16_7025001 chrX_7025001 RAL-57 2400 chrX 7125220 7125254 chrX 7134404 7134438 roo 6 9184 1.0 0.5 0.8 3.3 9218 chrX 7125220 intergenic not near genes chrX 7129829 intergenic not near genes chrX 7134438 intergenic not near genes chrX_6_7125001 chrX_7125001 RAL-57 2401 chrX 7293782 7293782 chrX 13057300 13057301 5 5763519 60.5 15.0 37.8 0.1 5763519 chrX 7293782 intron,intron CR44357 -,CG1677 - chrX 10175542 intron,intron CR44894 -,CG43902 + chrX 13057301 intron rad + chrX_5_10175001 chrX_10175001 RAL-57 2402 chrX 7351491 7351541 chrX 7351595 7351643 7 103 1.5 1.5 1.5 2.8 152 chrX 7351491 intron,intron CR44357 -,CG1677 - chrX 7351567 intron,intron CR44357 -,CG1677 - chrX 7351643 intron,intron CR44357 -,CG1677 - chrX_7_7350001 chrX_7350001 RAL-57 2403 chrX 7702884 7702918 chrX 7703347 7703382 jockey 10 464 5.5 6.0 5.8 1.5 498 chrX 7702884 intron CHES-1-like - chrX 7703133 intron CHES-1-like - chrX 7703382 intron CHES-1-like - chrX_10_7700001 chrX_7700001 RAL-57 2404 chrX 7737105 7737133 chrX 7737242 7737263 23 135 9.5 5.5 7.5 2.7 158 chrX 7737105 5` UTR Tom40 + chrX 7737184 intron Tom40 + chrX 7737263 intron Tom40 + chrX_23_7735001 chrX_7735001 RAL-57 2405 chrX 7832416 7832461 chrX 7832530 7832567 9 113 1.5 0.5 1.0 4.5 151 chrX 7832416 intron CG1402 + chrX 7832492 intron CG1402 + chrX 7832567 intron CG1402 + chrX_9_7830001 chrX_7830001 RAL-57 2406 chrX 7845701 7845742 chrX 7847252 7847293 hopper2 8 1550 3.0 3.0 3.0 2.0 1592 chrX 7845701 intergenic not near genes chrX 7846497 intergenic not near genes chrX 7847293 intergenic not near genes chrX_8_7845001 chrX_7845001 RAL-57 2407 chrX 7863208 7863222 chrX 7863293 7863304 5 86 6.5 0.0 3.2 1.2 96 chrX 7863208 intergenic not near genes chrX 7863256 intergenic not near genes chrX 7863304 intergenic not near genes chrX_5_7860001 chrX_7860001 RAL-57 2408 chrX 7881828 7881879 chrX 7881937 7881986 18 107 3.5 11.5 7.5 2.1 158 chrX 7881828 intergenic Ir7f -,Ir7e - chrX 7881907 intergenic Ir7f -,Ir7e - chrX 7881986 3` UTR Ir7f - chrX_18_7880001 chrX_7880001 RAL-57 2409 chrX 8031404 8031444 chrX 8035738 8035748 Juan 6 4328 1.5 5.5 3.5 1.3 4344 chrX 8031404 intergenic not near genes chrX 8033576 intergenic not near genes chrX 8035748 3` UTR CG2233 - chrX_6_8030001 chrX_8030001 RAL-57 2410 chrX 8066558 8066602 chrX 8066665 8066716 7 112 0.0 0.0 0.0 7.0 158 chrX 8066558 intron mys + chrX 8066637 intron mys + chrX 8066716 intron mys + chrX_7_8065001 chrX_8065001 RAL-57 2411 chrX 8069557 8069576 chrX 8069666 8069687 4 110 4.5 3.5 4.0 0.8 130 chrX 8069557 3` UTR mys + chrX 8069622 3` UTR mys + chrX 8069687 3` UTR mys + chrX_4_8065001 chrX_8065001 RAL-57 2412 chrX 8092276 8092318 chrX 8092386 8092428 10 110 3.0 7.5 5.2 1.6 152 chrX 8092276 intron Ubc-E2H - chrX 8092352 intron Ubc-E2H - chrX 8092428 intron Ubc-E2H - chrX_10_8090001 chrX_8090001 RAL-57 2413 chrX 8544138 8544158 chrX 8544242 8544262 4 103 0.5 3.0 1.8 1.4 124 chrX 8544138 intron Nrg + chrX 8544200 intron Nrg + chrX 8544262 intron Nrg + chrX_4_8540001 chrX_8540001 RAL-57 2414 chrX 8708689 8708743 chrX 8708848 8708901 79 162 104.0 67.5 85.8 0.9 212 chrX 8708689 intergenic not near genes chrX 8708795 intergenic not near genes chrX 8708901 intergenic not near genes chrX_79_8705001 chrX_8705001 RAL-57 2415 chrX 8772226 8772250 chrX 8772330 8772353 6 102 6.5 6.5 6.5 0.8 127 chrX 8772226 intron Lim1 - chrX 8772290 intron Lim1 - chrX 8772353 intron Lim1 - chrX_6_8770001 chrX_8770001 RAL-57 2416 chrX 8787470 8787499 chrX 8787592 8787604 8 114 7.0 8.0 7.5 0.9 134 chrX 8787470 intron Lim1 - chrX 8787537 intron Lim1 - chrX 8787604 intron Lim1 - chrX_8_8785001 chrX_8785001 RAL-57 2417 chrX 8922305 8922340 chrX 8922764 8922799 jockey 12 457 11.0 6.5 8.8 1.2 494 chrX 8922305 intron rdgA + chrX 8922552 intron rdgA + chrX 8922799 intron rdgA + chrX_12_8920001 chrX_8920001 RAL-57 2418 chrX 8922349 8922359 chrX 8922757 8922818 jockey 6 447 9.5 6.0 7.8 0.7 469 chrX 8922349 intron rdgA + chrX 8922584 intron rdgA + chrX 8922818 intron rdgA + chrX_6_8920001 chrX_8920001 RAL-57 2419 chrX 8948742 8948789 chrX 8956277 8956324 roo 5 7535 0.5 2.5 1.5 2.0 7582 chrX 8948742 intron rdgA + chrX 8952533 intron rdgA + chrX 8956324 intron rdgA + chrX_5_8950001 chrX_8950001 RAL-57 2420 chrX 9010194 9010233 chrX 9010296 9010335 9 97 12.5 12.0 12.2 0.7 141 chrX 9010194 intron,intron rdgA +,CR43836 - chrX 9010264 intron,intron rdgA +,CR43836 - chrX 9010335 intron,intron rdgA +,CR43836 - chrX_9_9010001 chrX_9010001 RAL-57 2421 chrX 9126741 9126777 chrX 9126910 9126945 11 169 4.0 6.5 5.2 1.8 204 chrX 9126741 intron fend - chrX 9126843 intron fend - chrX 9126945 intron fend - chrX_11_9125001 chrX_9125001 RAL-57 2422 chrX 9218059 9218076 chrX 9218175 9218192 10 115 10.5 1.5 6.0 1.4 133 chrX 9218059 3` UTR t - chrX 9218126 3` UTR t - chrX 9218192 3` UTR t - chrX_10_9215001 chrX_9215001 RAL-57 2423 chrX 9380403 9380406 chrX 15012591 15012594 4 5632188 20.5 16.0 18.2 0.2 5632191 chrX 9380403 intron mgl - chrX 12196498 exon Ten-a + chrX 15012594 intron hiw - chrX_4_12195001 chrX_12195001 RAL-57 2424 chrX 9439431 9439457 chrX 9439517 9439558 10 98 4.0 4.0 4.0 2.0 127 chrX 9439431 intron mgl - chrX 9439494 intron mgl - chrX 9439558 intron mgl - chrX_10_9435001 chrX_9435001 RAL-57 2425 chrX 9508115 9508160 chrX 9509658 9509703 jockey 27 1542 9.0 6.5 7.8 3.1 1588 chrX 9508115 intron CG32700 - chrX 9508909 intron CG32700 - chrX 9509703 intron CG32700 - chrX_27_9505001 chrX_9505001 RAL-57 2426 chrX 9555397 9555449 chrX 9555531 9555583 13 133 2.5 1.0 1.8 4.6 186 chrX 9555397 3` UTR RpS28b + chrX 9555490 3` UTR RpS28b + chrX 9555583 3` UTR RpS28b + chrX_13_9555001 chrX_9555001 RAL-57 2427 chrX 9575793 9575824 chrX 9576116 9576170 mdg3 13 338 7.5 7.5 7.5 1.5 377 chrX 9575793 intron,exon CG32699 -,CG42395 - chrX 9575982 intron,intron CG32699 -,CG42395 - chrX 9576170 intron,5` UTR CG32699 -,CG42395 - chrX_13_9575001 chrX_9575001 RAL-57 2428 chrX 9758036 9758064 chrX 9758146 9758174 6 110 5.0 0.0 2.5 1.7 138 chrX 9758036 intergenic not near genes chrX 9758105 intergenic not near genes chrX 9758174 intergenic not near genes chrX_6_9755001 chrX_9755001 RAL-57 2429 chrX 10106698 10106724 chrX 10106802 10106829 7 103 3.0 5.5 4.2 1.3 131 chrX 10106698 intron RhoU + chrX 10106764 intron RhoU + chrX 10106829 intron RhoU + chrX_7_10105001 chrX_10105001 RAL-57 2430 chrX 10138196 10138213 chrX 10145725 10145733 412 5 7527 1.5 4.5 3.0 1.2 7537 chrX 10138196 intron,intron RhoU +,CR44894 - chrX 10141964 intron,intron RhoU +,CR44894 - chrX 10145733 intron,intron RhoU +,CR44894 - chrX_5_10140001 chrX_10140001 RAL-57 2431 chrX 10154262 10154306 chrX 10154362 10154407 16 101 3.0 3.5 3.2 3.8 145 chrX 10154262 intron,intron CR44894 -,CG12645 + chrX 10154334 intron,intron CR44894 -,CG12645 + chrX 10154407 intron,exon CR44894 -,CG12645 + chrX_16_10150001 chrX_10150001 RAL-57 2432 chrX 10167635 10167682 chrX 10167771 10167817 11 131 3.5 1.5 2.5 3.1 182 chrX 10167635 intron,intron CR44894 -,CG43902 + chrX 10167726 intron,intron CR44894 -,CG43902 + chrX 10167817 intron,intron CR44894 -,CG43902 + chrX_11_10165001 chrX_10165001 RAL-57 2433 chrX 10216835 10216852 chrX 10216927 10216938 9 96 20.0 22.5 21.2 0.4 103 chrX 10216835 3` UTR l(1)G0230 + chrX 10216886 3` UTR l(1)G0230 + chrX 10216938 3` UTR l(1)G0230 + chrX_9_10215001 chrX_10215001 RAL-57 2434 chrX 10267301 10267321 chrX 10276476 10276496 roo 4 9174 1.0 1.0 1.0 2.0 9195 chrX 10267301 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276496 3` UTR alpha-Man-I - chrX_4_10270001 chrX_10270001 RAL-57 2435 chrX 10306039 10306063 chrX 10306145 10306169 4 105 7.0 0.0 3.5 0.9 130 chrX 10306039 intron alpha-Man-I - chrX 10306104 intron alpha-Man-I - chrX 10306169 intron alpha-Man-I - chrX_4_10305001 chrX_10305001 RAL-57 2436 chrX 10317533 10317582 chrX 10317636 10317685 8 103 0.0 0.5 0.2 6.7 152 chrX 10317533 intron alpha-Man-I - chrX 10317609 intron alpha-Man-I - chrX 10317685 intron alpha-Man-I - chrX_8_10315001 chrX_10315001 RAL-57 2437 chrX 10322300 10322332 chrX 10322433 10322463 13 133 3.5 12.0 7.8 1.5 163 chrX 10322300 intron alpha-Man-I - chrX 10322382 intron alpha-Man-I - chrX 10322463 intron alpha-Man-I - chrX_13_10320001 chrX_10320001 RAL-57 2438 chrX 10348779 10348796 chrX 10356368 10356385 springer 6 7589 6.5 7.5 7.0 0.8 7606 chrX 10348779 intergenic snoRNA:U3:9B + chrX 10352582 intergenic not near genes chrX 10356385 intergenic l(1)G0289 - chrX_6_10350001 chrX_10350001 RAL-57 2439 chrX 10446681 10446700 chrX 10446788 10446807 4 107 3.0 2.0 2.5 1.1 126 chrX 10446681 intron CG32683 - chrX 10446744 intron CG32683 - chrX 10446807 intron CG32683 - chrX_4_10445001 chrX_10445001 RAL-57 2440 chrX 10453045 10453100 chrX 10453261 10453316 19 216 4.0 4.0 4.0 3.8 271 chrX 10453045 intron CG32683 - chrX 10453180 intron CG32683 - chrX 10453316 intron CG32683 - chrX_19_10450001 chrX_10450001 RAL-57 2441 chrX 10550837 10550883 chrX 10552329 10552364 hobo 11 1488 2.5 1.5 2.0 3.7 1527 chrX 10550837 intron spri - chrX 10551600 intron spri - chrX 10552364 intron spri - chrX_11_10550001 chrX_10550001 RAL-57 2442 chrX 10590765 10590815 chrX 10590866 10590914 11 100 3.5 2.0 2.8 2.9 149 chrX 10590765 intergenic Hmr - chrX 10590840 intergenic Hmr - chrX 10590914 intergenic Hmr - chrX_11_10590001 chrX_10590001 RAL-57 2443 chrX 10651607 10651646 chrX 10651748 10651787 25 141 7.5 9.5 8.5 2.6 180 chrX 10651607 intron X11Lbeta + chrX 10651697 intron X11Lbeta + chrX 10651787 intron X11Lbeta + chrX_25_10650001 chrX_10650001 RAL-57 2444 chrX 10669753 10669794 chrX 10669859 10669886 5 93 6.5 7.5 7.0 0.6 133 chrX 10669753 intron X11Lbeta + chrX 10669820 intron X11Lbeta + chrX 10669886 intron X11Lbeta + chrX_5_10665001 chrX_10665001 RAL-57 2445 chrX 10686035 10686082 chrX 10691197 10691244 roo 9 5162 2.5 1.5 2.0 3.0 5209 chrX 10686035 intron X11Lbeta + chrX 10688640 intron X11Lbeta + chrX 10691244 intron X11Lbeta + chrX_9_10685001 chrX_10685001 RAL-57 2446 chrX 10772654 10772695 chrX 10772762 10772790 Tirant 23 102 11.5 6.0 8.8 2.3 136 chrX 10772654 intron CG15211 + chrX 10772722 intron CG15211 + chrX 10772790 intron CG15211 + chrX_23_10770001 chrX_10770001 RAL-57 2447 chrX 10803009 10803039 chrX 10803119 10803149 5 110 4.5 7.0 5.8 0.7 140 chrX 10803009 intron Imp - chrX 10803079 intron Imp - chrX 10803149 intron Imp - chrX_5_10800001 chrX_10800001 RAL-57 2448 chrX 10876597 10876646 chrX 10876700 10876749 6 99 5.5 6.5 6.0 0.9 152 chrX 10876597 intron CG1637 - chrX 10876673 intron CG1637 - chrX 10876749 intron CG1637 - chrX_6_10875001 chrX_10875001 RAL-57 2449 chrX 10982466 10982479 chrX 10982661 10982705 4 218 4.5 0.5 2.5 1.1 239 chrX 10982466 intron CG42339 - chrX 10982586 intron CG42339 - chrX 10982705 intron CG42339 - chrX_4_10980001 chrX_10980001 RAL-57 2450 chrX 11095977 11096014 chrX 11103104 11103141 HMS-Beagle 17 7127 6.0 12.0 9.0 1.7 7164 chrX 11095977 intergenic not near genes chrX 11099559 intergenic not near genes chrX 11103141 intron CG42249 + chrX_17_11095001 chrX_11095001 RAL-57 2451 chrX 11109417 11109417 chrX 12946233 12946235 48 1836817 26.5 13.0 19.8 2.3 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_48_12025001 chrX_12025001 RAL-57 2452 chrX 11179023 11179061 chrX 11179133 11179171 5 110 5.0 1.5 3.2 1.2 148 chrX 11179023 intergenic not near genes chrX 11179097 intergenic not near genes chrX 11179171 intergenic not near genes chrX_5_11175001 chrX_11175001 RAL-57 2453 chrX 11191882 11191924 chrX 11191985 11192027 5 103 2.5 4.0 3.2 1.2 145 chrX 11191882 intergenic not near genes chrX 11191954 intergenic not near genes chrX 11192027 intergenic not near genes chrX_5_11190001 chrX_11190001 RAL-57 2454 chrX 11254144 11254193 chrX 11254279 11254329 14 135 1.0 3.0 2.0 4.7 185 chrX 11254144 intron CG44422 - chrX 11254236 intron CG44422 - chrX 11254329 intron CG44422 - chrX_14_11250001 chrX_11250001 RAL-57 2455 chrX 11312077 11312091 chrX 11319413 11319433 Stalker2 5 7351 3.5 3.5 3.5 1.1 7356 chrX 11312077 intergenic not near genes chrX 11315755 intergenic not near genes chrX 11319433 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-57 2456 chrX 11379746 11379792 chrX 11379915 11379962 11 165 4.0 3.5 3.8 2.3 216 chrX 11379746 intron dlg1 + chrX 11379854 intron dlg1 + chrX 11379962 intron dlg1 + chrX_11_11375001 chrX_11375001 RAL-57 2457 chrX 11572547 11572596 chrX 11572671 11572720 13 124 39.0 44.5 41.8 0.3 173 chrX 11572547 intergenic Kmn1 -,CG11697 + chrX 11572634 intergenic CG11697 +,Kmn1 - chrX 11572720 5` UTR CG11697 + chrX_13_11570001 chrX_11570001 RAL-57 2458 chrX 11633404 11633440 chrX 11640474 11640519 297 8 7078 4.0 0.5 2.2 2.5 7115 chrX 11633404 intron Ptp10D + chrX 11636962 intron Ptp10D + chrX 11640519 intron Ptp10D + chrX_8_11635001 chrX_11635001 RAL-57 2459 chrX 11804652 11804689 chrX 11804781 11804818 7 129 3.5 3.0 3.2 1.7 166 chrX 11804652 intron Hsc70-3 - chrX 11804735 intron Hsc70-3 - chrX 11804818 intron Hsc70-3 - chrX_7_11800001 chrX_11800001 RAL-57 2460 chrX 11806643 11806671 chrX 11806757 11806785 4 114 0.0 3.5 1.8 1.4 142 chrX 11806643 intron Hsc70-3 - chrX 11806714 intron Hsc70-3 - chrX 11806785 intron Hsc70-3 - chrX_4_11805001 chrX_11805001 RAL-57 2461 chrX 11880904 11880918 chrX 11881010 11881025 7 106 10.5 5.0 7.8 0.8 121 chrX 11880904 exon CG10353 - chrX 11880964 intron CG10353 - chrX 11881025 intron CG10353 - chrX_7_11880001 chrX_11880001 RAL-57 2462 chrX 12038064 12038116 chrX 12038283 12038335 32 218 6.5 6.0 6.2 4.4 271 chrX 12038064 intergenic not near genes chrX 12038200 intergenic not near genes chrX 12038335 intergenic not near genes chrX_32_12035001 chrX_12035001 RAL-57 2463 chrX 12094016 12094060 chrX 12094132 12094176 9 113 0.5 2.0 1.2 4.1 160 chrX 12094016 intron,intron CR43960 +,Ten-a + chrX 12094096 intron,intron CR43960 +,Ten-a + chrX 12094176 intron,intron CR43960 +,Ten-a + chrX_9_12090001 chrX_12090001 RAL-57 2464 chrX 12168121 12168154 chrX 12173580 12173621 I-element 4 5464 4.0 2.0 3.0 1.0 5500 chrX 12168121 intron Ten-a + chrX 12170871 intron Ten-a + chrX 12173621 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-57 2465 chrX 12202746 12202797 chrX 12202854 12202905 6 108 2.5 4.0 3.2 1.4 159 chrX 12202746 intron Ten-a + chrX 12202826 intron Ten-a + chrX 12202905 intron Ten-a + chrX_6_12200001 chrX_12200001 RAL-57 2466 chrX 12281936 12281967 chrX 12282047 12282078 9 111 2.0 3.5 2.8 2.4 142 chrX 12281936 intron Ten-a + chrX 12282007 intron Ten-a + chrX 12282078 intron Ten-a + chrX_9_12280001 chrX_12280001 RAL-57 2467 chrX 12350747 12350805 chrX 12350853 12350860 7 93 1.5 0.0 0.8 3.9 113 chrX 12350747 intergenic not near genes chrX 12350804 intergenic not near genes chrX 12350860 intergenic not near genes chrX_7_12350001 chrX_12350001 RAL-57 2468 chrX 12360974 12360985 chrX 12361131 12361161 5 162 7.0 16.5 11.8 0.4 187 chrX 12360974 intergenic not near genes chrX 12361068 intergenic not near genes chrX 12361161 intergenic not near genes chrX_5_12360001 chrX_12360001 RAL-57 2469 chrX 12375467 12375480 chrX 12375590 12375603 4 122 7.5 2.0 4.8 0.7 136 chrX 12375467 intergenic Ir11a - chrX 12375535 intergenic Ir11a - chrX 12375603 exon Ir11a - chrX_4_12375001 chrX_12375001 RAL-57 2470 chrX 12375486 12375504 chrX 12375588 12375627 7 120 4.5 2.0 3.2 1.7 141 chrX 12375486 intergenic Ir11a - chrX 12375556 intergenic Ir11a - chrX 12375627 exon Ir11a - chrX_7_12375001 chrX_12375001 RAL-57 2471 chrX 5190120 5190125 chrX 12649914 12649914 4 7459791 8.5 28.0 18.2 0.2 7459794 chrX 5190120 intron,intron CG15465 +,rg + chrX 8920017 intron,3` UTR rdgA +,CR44111 - chrX 12649914 intron Tomosyn + chrX_4_8920001 chrX_8920001 RAL-57 2472 chrX 12752253 12752305 chrX 12752365 12752416 18 112 8.0 6.0 7.0 2.2 163 chrX 12752253 5` UTR CR44619 + chrX 12752334 5` UTR CR44619 + chrX 12752416 5` UTR CR44619 + chrX_18_12750001 chrX_12750001 RAL-57 2473 chrX 12862263 12862310 chrX 12862405 12862441 4 135 2.5 0.0 1.2 1.8 178 chrX 12862263 intron Pde9 - chrX 12862352 intron Pde9 - chrX 12862441 intron Pde9 - chrX_4_12860001 chrX_12860001 RAL-57 2474 chrX 11109417 11109417 chrX 12946234 12946234 13 1836817 26.5 13.0 19.8 0.6 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_13_12025001 chrX_12025001 RAL-57 2475 chrX 12946234 12946234 chrX 16632148 16632149 12 3685915 12.0 15.5 13.8 0.8 3685915 chrX 12946234 3` UTR fne + chrX 14789192 3` UTR rut - chrX 16632149 intron,5` UTR Rok -,CG9777 - chrX_12_14785001 chrX_14785001 RAL-57 2476 chrX 12946234 12946234 chrX 19355850 19355852 4 6409616 12.0 1.0 6.5 0.5 6409618 chrX 12946234 3` UTR fne + chrX 16151043 intergenic not near genes chrX 19355852 intron kek5 + chrX_4_16150001 chrX_16150001 RAL-57 2477 chrX 11109417 11109417 chrX 12946235 12946235 9 1836818 26.5 13.0 19.8 0.4 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_9_12025001 chrX_12025001 RAL-57 2478 chrX 12946235 12946235 chrX 19355850 19355850 4 6409615 12.5 1.0 6.8 0.5 6409615 chrX 12946235 3` UTR fne + chrX 16151042 intergenic not near genes chrX 19355850 intron kek5 + chrX_4_16150001 chrX_16150001 RAL-57 2479 chrX 13103193 13103227 chrX 13103298 13103332 6 105 3.0 3.5 3.2 1.4 139 chrX 13103193 intron CG43313 - chrX 13103262 intron CG43313 - chrX 13103332 intron CG43313 - chrX_6_13100001 chrX_13100001 RAL-57 2480 chrX 13146574 13146630 chrX 13146687 13146743 5 113 2.0 1.5 1.8 1.8 169 chrX 13146574 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146743 intron CG32645 + chrX_5_13145001 chrX_13145001 RAL-57 2481 chrX 13172329 13172376 chrX 13172429 13172477 6 101 2.0 4.0 3.0 1.5 148 chrX 13172329 exon CG34411 - chrX 13172403 intron CG34411 - chrX 13172477 intron CG34411 - chrX_6_13170001 chrX_13170001 RAL-57 2482 chrX 13272154 13272180 chrX 13272256 13272282 13 99 12.5 12.0 12.2 1.0 128 chrX 13272154 intron HDAC4 - chrX 13272218 intron HDAC4 - chrX 13272282 intron HDAC4 - chrX_13_13270001 chrX_13270001 RAL-57 2483 chrX 13401465 13401514 chrX 13401842 13401891 jockey 13 377 3.5 3.5 3.5 2.9 426 chrX 13401465 intergenic CG1673 +,CG12725 - chrX 13401678 intergenic CG12725 -,CG1673 + chrX 13401891 3` UTR CG12725 - chrX_13_13400001 chrX_13400001 RAL-57 2484 chrX 13429469 13429489 chrX 13430643 13430663 jockey 9 1172 0.5 8.5 4.5 1.6 1194 chrX 13429469 intergenic not near genes chrX 13430066 intergenic not near genes chrX 13430663 intergenic not near genes chrX_9_13430001 chrX_13430001 RAL-57 2485 chrX 13463639 13463669 chrX 13469241 13469271 mdg3 9 5602 3.5 2.0 2.8 2.4 5632 chrX 13463639 intron Neto + chrX 13466455 intron Neto + chrX 13469271 intron Neto + chrX_9_13465001 chrX_13465001 RAL-57 2486 chrX 13593209 13593223 chrX 13593314 13593328 5 105 1.0 0.0 0.5 3.3 119 chrX 13593209 3` UTR Tango13 + chrX 13593268 intergenic Tango13 +,up - chrX 13593328 intergenic Tango13 +,up - chrX_5_13590001 chrX_13590001 RAL-57 2487 chrX 13821449 13821477 chrX 13821551 13821574 6 100 6.5 5.5 6.0 0.9 125 chrX 13821449 intron Clic - chrX 13821512 intron Clic - chrX 13821574 intron Clic - chrX_6_13820001 chrX_13820001 RAL-57 2488 chrX 13908794 13908803 chrX 13908875 13908885 7 88 11.5 15.5 13.5 0.5 91 chrX 13908794 intron mamo - chrX 13908840 intron mamo - chrX 13908885 intron mamo - chrX_7_13905001 chrX_13905001 RAL-57 2489 chrX 13935490 13935525 chrX 13935598 13935631 26 107 11.0 14.5 12.8 1.9 141 chrX 13935490 intron mamo - chrX 13935560 intron mamo - chrX 13935631 intron mamo - chrX_26_13935001 chrX_13935001 RAL-57 2490 chrX 13937966 13938001 chrX 13941262 13941292 I-element 13 3293 3.0 4.5 3.8 2.7 3326 chrX 13937966 intron mamo - chrX 13939629 intron mamo - chrX 13941292 intron mamo - chrX_13_13935001 chrX_13935001 RAL-57 2491 chrX 13943271 13943298 chrX 13943387 13943411 5 115 0.0 11.5 5.8 0.7 140 chrX 13943271 intron mamo - chrX 13943341 intron mamo - chrX 13943411 intron mamo - chrX_5_13940001 chrX_13940001 RAL-57 2492 chrX 13975882 13975892 chrX 13975984 13975994 5 102 3.5 3.5 3.5 1.1 112 chrX 13975882 intron mamo - chrX 13975938 intron mamo - chrX 13975994 intron mamo - chrX_5_13975001 chrX_13975001 RAL-57 2493 chrX 14105013 14105018 chrX 14114186 14114189 roo 4 9174 7.5 4.5 6.0 0.6 9176 chrX 14105013 intergenic not near genes chrX 14109601 intergenic not near genes chrX 14114189 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-57 2494 chrX 14105021 14105050 chrX 14114171 14114215 roo 4 9164 3.0 3.5 3.2 1.0 9194 chrX 14105021 intergenic not near genes chrX 14109618 intergenic not near genes chrX 14114215 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-57 2495 chrX 14209441 14209490 chrX 14209557 14209606 25 115 5.5 6.5 6.0 3.6 165 chrX 14209441 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209524 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209606 intron,intron l(1)G0007 +,l(1)G0469 - chrX_25_14205001 chrX_14205001 RAL-57 2496 chrX 14312756 14312792 chrX 14312857 14312893 14 101 4.5 1.5 3.0 3.5 137 chrX 14312756 intergenic not near genes chrX 14312824 intergenic not near genes chrX 14312893 intergenic not near genes chrX_14_14310001 chrX_14310001 RAL-57 2497 chrX 14331759 14331791 chrX 14332118 14332143 7 355 1.5 3.5 2.5 2.0 384 chrX 14331759 intron dpr8 + chrX 14331951 intron dpr8 + chrX 14332143 intron dpr8 + chrX_7_14330001 chrX_14330001 RAL-57 2498 chrX 14333268 14333305 chrX 14333375 14333392 7 95 0.5 4.5 2.5 2.0 124 chrX 14333268 intron dpr8 + chrX 14333330 intron dpr8 + chrX 14333392 intron dpr8 + chrX_7_14330001 chrX_14330001 RAL-57 2499 chrX 14366526 14366543 chrX 14366631 14366648 10 105 7.0 5.5 6.2 1.4 122 chrX 14366526 intron dpr8 + chrX 14366587 intron dpr8 + chrX 14366648 intron dpr8 + chrX_10_14365001 chrX_14365001 RAL-57 2500 chrX 14381393 14381409 chrX 14381572 14381585 7 178 2.5 0.0 1.2 3.2 192 chrX 14381393 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381489 intron dpr8 + chrX 14381585 intron dpr8 + chrX_7_14380001 chrX_14380001 RAL-57 2501 chrX 14416290 14416335 chrX 14421082 14421127 F-element 7 4792 2.0 1.5 1.8 2.5 4837 chrX 14416290 intron dpr8 + chrX 14418708 intron dpr8 + chrX 14421127 intron dpr8 + chrX_7_14415001 chrX_14415001 RAL-57 2502 chrX 14589691 14589704 chrX 14589953 14589966 pogo 10 261 7.0 11.0 9.0 1.0 275 chrX 14589691 intron CG9413 - chrX 14589828 intron CG9413 - chrX 14589966 intron CG9413 - chrX_10_14585001 chrX_14585001 RAL-57 2503 chrX 14628163 14628207 chrX 14628279 14628312 6 113 2.5 0.0 1.2 2.7 149 chrX 14628163 intron NetA - chrX 14628238 intron NetA - chrX 14628312 intron NetA - chrX_6_14625001 chrX_14625001 RAL-57 2504 chrX 14756826 14756857 chrX 14757345 14757376 12 519 2.5 6.0 4.2 2.3 550 chrX 14756826 intergenic not near genes chrX 14757101 intergenic CG15890 - chrX 14757376 intergenic CG15890 - chrX_12_14755001 chrX_14755001 RAL-57 2505 chrX 14778017 14778045 chrX 14782839 14782867 Doc 6 4822 0.5 4.5 2.5 1.7 4850 chrX 14778017 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782867 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-57 2506 chrX 14818742 14818795 chrX 14823971 14824024 copia 7 5225 2.5 3.5 3.0 1.8 5282 chrX 14818742 intron rut - chrX 14821383 intron rut - chrX 14824024 intron rut - chrX_7_14820001 chrX_14820001 RAL-57 2507 chrX 4341074 4341103 chrX 14861747 14861775 4 10520672 12.0 3.5 7.8 0.5 10520701 chrX 4341074 intron norpA + chrX 9601424 intron Gga + chrX 14861775 intron Flo2 + chrX_4_9600001 chrX_9600001 RAL-57 2508 chrX 14883570 14883615 chrX 14883671 14883716 4 101 4.0 1.0 2.5 1.1 146 chrX 14883570 intron Flo2 + chrX 14883643 intron Flo2 + chrX 14883716 intron Flo2 + chrX_4_14880001 chrX_14880001 RAL-57 2509 chrX 14888955 14888981 chrX 14889066 14889092 8 111 0.5 5.5 3.0 2.0 137 chrX 14888955 intron,intron Flo2 +,CG9514 - chrX 14889024 intron,intron Flo2 +,CG9514 - chrX 14889092 intron,intron Flo2 +,CG9514 - chrX_8_14885001 chrX_14885001 RAL-57 2510 chrX 14926616 14926626 chrX 14926724 14926733 5 109 10.5 13.0 11.8 0.4 117 chrX 14926616 intron Flo2 + chrX 14926674 intron Flo2 + chrX 14926733 intron Flo2 + chrX_5_14925001 chrX_14925001 RAL-57 2511 chrX 14936840 14936890 chrX 14946122 14946172 roo 19 9282 5.5 5.0 5.2 3.1 9332 chrX 14936840 intron pdgy - chrX 14941506 intron pdgy - chrX 14946172 intron pdgy - chrX_19_14940001 chrX_14940001 RAL-57 2512 chrX 14968051 14968098 chrX 14968155 14968202 5 104 0.0 3.5 1.8 1.8 151 chrX 14968051 intron eag + chrX 14968126 intron eag + chrX 14968202 intron eag + chrX_5_14965001 chrX_14965001 RAL-57 2513 chrX 14981710 14981740 chrX 14981814 14981844 7 104 1.0 2.5 1.8 2.5 134 chrX 14981710 intron eag + chrX 14981777 intron eag + chrX 14981844 intron eag + chrX_7_14980001 chrX_14980001 RAL-57 2514 chrX 15059150 15059205 chrX 15059281 15059336 8 131 3.0 9.5 6.2 1.1 186 chrX 15059150 exon hiw - chrX 15059243 intron hiw - chrX 15059336 intron hiw - chrX_8_15055001 chrX_15055001 RAL-57 2515 chrX 15127201 15127236 chrX 15127387 15127422 19 186 5.5 4.5 5.0 3.2 221 chrX 15127201 intron drd + chrX 15127312 intron drd + chrX 15127422 intron drd + chrX_19_15125001 chrX_15125001 RAL-57 2516 chrX 15234346 15234390 chrX 15234454 15234498 13 108 4.0 7.0 5.5 2.0 152 chrX 15234346 intergenic not near genes chrX 15234422 intergenic not near genes chrX 15234498 intergenic not near genes chrX_13_15230001 chrX_15230001 RAL-57 2517 chrX 15273686 15273739 chrX 15274875 15274925 1360 21 1181 6.0 5.5 5.8 3.1 1239 chrX 15273686 intergenic not near genes chrX 15274306 intergenic not near genes chrX 15274925 intergenic not near genes chrX_21_15270001 chrX_15270001 RAL-57 2518 chrX 15318568 15318584 chrX 15318669 15318684 10 101 6.5 18.0 12.2 0.8 116 chrX 15318568 3` UTR gce + chrX 15318626 3` UTR gce + chrX 15318684 3` UTR gce + chrX_10_15315001 chrX_15315001 RAL-57 2519 chrX 15412117 15412173 chrX 15412691 15412747 36 574 3.0 7.5 5.2 5.8 630 chrX 15412117 intron Cngl - chrX 15412432 intron Cngl - chrX 15412747 intron Cngl - chrX_36_15410001 chrX_15410001 RAL-57 2520 chrX 15413032 15413084 chrX 15417359 15417383 Juan 19 4319 9.5 1.5 5.5 2.9 4351 chrX 15413032 intron Cngl - chrX 15415208 intron Cngl - chrX 15417383 intron Cngl - chrX_19_15415001 chrX_15415001 RAL-57 2521 chrX 15435691 15435703 chrX 15436138 15436161 rover 6 456 0.0 7.5 3.8 1.2 470 chrX 15435691 intron Cngl - chrX 15435926 intron Cngl - chrX 15436161 intron Cngl - chrX_6_15435001 chrX_15435001 RAL-57 2522 chrX 15519774 15519831 chrX 15519877 15519934 28 102 3.5 15.5 9.5 2.7 160 chrX 15519774 intron Ac13E - chrX 15519854 intron Ac13E - chrX 15519934 exon Ac13E - chrX_28_15515001 chrX_15515001 RAL-57 2523 chrX 15557552 15557590 chrX 15557695 15557733 11 141 8.0 3.5 5.8 1.6 181 chrX 15557552 intergenic not near genes chrX 15557642 intergenic not near genes chrX 15557733 intergenic not near genes chrX_11_15555001 chrX_15555001 RAL-57 2524 chrX 15565620 15565656 chrX 15565722 15565767 9 110 4.0 2.5 3.2 2.1 147 chrX 15565620 intergenic not near genes chrX 15565694 intergenic not near genes chrX 15565767 intergenic not near genes chrX_9_15565001 chrX_15565001 RAL-57 2525 chrX 15589438 15589459 chrX 15589642 15589642 13 202 11.5 24.0 17.8 0.7 204 chrX 15589438 intron CG9220 - chrX 15589540 intron CG9220 - chrX 15589642 exon CG9220 - chrX_13_15585001 chrX_15585001 RAL-57 2526 chrX 15591187 15591205 chrX 15591288 15591306 4 100 1.5 9.5 5.5 0.6 119 chrX 15591187 intron CG9220 - chrX 15591246 intron CG9220 - chrX 15591306 intron CG9220 - chrX_4_15590001 chrX_15590001 RAL-57 2527 chrX 15678010 15678058 chrX 15678113 15678160 25 101 6.5 8.5 7.5 2.9 150 chrX 15678010 intergenic CG12708 + chrX 15678085 intergenic CG12708 + chrX 15678160 intergenic CG12708 + chrX_25_15675001 chrX_15675001 RAL-57 2528 chrX 15898425 15898457 chrX 15898604 15898637 4 179 4.0 1.5 2.8 1.1 212 chrX 15898425 intron shi + chrX 15898531 intron shi + chrX 15898637 intron shi + chrX_4_15895001 chrX_15895001 RAL-57 2529 chrX 15970886 15970913 chrX 15970989 15971014 5 102 0.0 2.0 1.0 2.5 128 chrX 15970886 intron mmd - chrX 15970950 intron mmd - chrX 15971014 intron mmd - chrX_5_15970001 chrX_15970001 RAL-57 2530 chrX 16154914 16154925 chrX 16155021 16155031 5 107 5.5 2.0 3.8 1.0 117 chrX 16154914 intergenic not near genes chrX 16154972 intergenic not near genes chrX 16155031 intergenic not near genes chrX_5_16150001 chrX_16150001 RAL-57 2531 chrX 16160273 16160299 chrX 16160373 16160400 7 101 6.5 3.0 4.8 1.2 127 chrX 16160273 intergenic not near genes chrX 16160336 intergenic not near genes chrX 16160400 intergenic not near genes chrX_7_16160001 chrX_16160001 RAL-57 2532 chrX 16222766 16222803 chrX 16231141 16231178 roo 6 8375 1.5 1.5 1.5 2.4 8412 chrX 16222766 intergenic not near genes chrX 16226972 intergenic not near genes chrX 16231178 intergenic not near genes chrX_6_16225001 chrX_16225001 RAL-57 2533 chrX 16295501 16295528 chrX 16295610 16295637 6 109 6.5 0.0 3.2 1.4 136 chrX 16295501 intron CG9911 - chrX 16295569 intron CG9911 - chrX 16295637 intron CG9911 - chrX_6_16295001 chrX_16295001 RAL-57 2534 chrX 16340644 16340697 chrX 16349824 16349879 roo 11 9180 0.5 4.5 2.5 3.1 9235 chrX 16340644 intergenic Dsp1 + chrX 16345262 intergenic not near genes chrX 16349879 intergenic sl + chrX_11_16345001 chrX_16345001 RAL-57 2535 chrX 16492620 16492677 chrX 16498222 16498278 mdg3 8 5602 1.0 0.0 0.5 5.3 5658 chrX 16492620 intron para - chrX 16495449 intron para - chrX 16498278 exon para - chrX_8_16495001 chrX_16495001 RAL-57 2536 chrX 16505841 16505881 chrX 16505948 16505953 23 102 18.0 15.0 16.5 1.3 112 chrX 16505841 intron para - chrX 16505897 intron para - chrX 16505953 intron para - chrX_23_16505001 chrX_16505001 RAL-57 2537 chrX 16529381 16529441 chrX 16529524 16529577 13 136 0.0 10.5 5.2 2.1 196 chrX 16529381 intron para - chrX 16529479 intron para - chrX 16529577 intron para - chrX_13_16525001 chrX_16525001 RAL-57 2538 chrX 16534010 16534033 chrX 16534122 16534145 12 112 0.0 4.5 2.2 3.8 135 chrX 16534010 intergenic not near genes chrX 16534078 intergenic not near genes chrX 16534145 intergenic not near genes chrX_12_16530001 chrX_16530001 RAL-57 2539 chrX 16650914 16650926 chrX 16651010 16651028 5 101 7.5 0.0 3.8 1.0 114 chrX 16650914 intergenic CG32573 +,CG42512 + chrX 16650971 intergenic CG32573 +,CG42512 + chrX 16651028 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 RAL-57 2540 chrX 16762586 16762599 chrX 16762759 16762773 7 174 2.0 3.0 2.5 2.0 187 chrX 16762586 intron if - chrX 16762680 intron if - chrX 16762773 intron if - chrX_7_16760001 chrX_16760001 RAL-57 2541 chrX 16821212 16821255 chrX 16821317 16821361 10 106 6.5 0.0 3.2 2.4 149 chrX 16821212 intron CG4829 + chrX 16821286 intron CG4829 + chrX 16821361 intron CG4829 + chrX_10_16820001 chrX_16820001 RAL-57 2542 chrX 16935986 16936033 chrX 16936429 16936471 jockey 20 442 3.5 12.0 7.8 2.3 485 chrX 16935986 intron CG4928 + chrX 16936228 intron CG4928 + chrX 16936471 intron CG4928 + chrX_20_16935001 chrX_16935001 RAL-57 2543 chrX 16951323 16951334 chrX 16951409 16951410 6 90 15.0 21.0 18.0 0.3 87 chrX 16951323 exon RhoGAP15B + chrX 16951366 exon RhoGAP15B + chrX 16951410 exon RhoGAP15B + chrX_6_16950001 chrX_16950001 RAL-57 2544 chrX 16951336 16951352 chrX 16951400 16951413 12 78 11.5 17.5 14.5 0.8 77 chrX 16951336 exon RhoGAP15B + chrX 16951374 exon RhoGAP15B + chrX 16951413 exon RhoGAP15B + chrX_12_16950001 chrX_16950001 RAL-57 2545 chrX 16983076 16983076 chrX 19404963 19404965 11 2421888 7.0 4.0 5.5 1.7 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_11_18190001 chrX_18190001 RAL-57 2546 chrX 1053117 1053123 chrX 16983077 16983077 8 15929958 15.0 8.0 11.5 0.6 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_8_9015001 chrX_9015001 RAL-57 2547 chrX 16983077 16983077 chrX 19404963 19404965 8 2421887 7.0 4.0 5.5 1.2 2421888 chrX 16983077 intron CG45002 - chrX 18194021 intron Frq2 + chrX 19404965 intron kek5 + chrX_8_18190001 chrX_18190001 RAL-57 2548 chrX 17011945 17011997 chrX 17012053 17012061 10 97 3.0 4.5 3.8 2.1 116 chrX 17011945 intron CG45002 - chrX 17012003 intron CG45002 - chrX 17012061 intron CG45002 - chrX_10_17010001 chrX_17010001 RAL-57 2549 chrX 17012468 17012496 chrX 17012584 17012610 8 116 5.0 1.0 3.0 2.0 142 chrX 17012468 intron CG45002 - chrX 17012539 intron CG45002 - chrX 17012610 intron CG45002 - chrX_8_17010001 chrX_17010001 RAL-57 2550 chrX 17013704 17013711 chrX 17013824 17013830 4 120 2.5 10.5 6.5 0.5 126 chrX 17013704 intron CG45002 - chrX 17013767 intron CG45002 - chrX 17013830 intron CG45002 - chrX_4_17010001 chrX_17010001 RAL-57 2551 chrX 17063160 17063195 chrX 17063272 17063307 4 112 2.0 1.0 1.5 1.6 147 chrX 17063160 intron CG45002 - chrX 17063234 intron CG45002 - chrX 17063307 intron CG45002 - chrX_4_17060001 chrX_17060001 RAL-57 2552 chrX 17122638 17122670 chrX 17122734 17122786 4 101 1.0 2.0 1.5 1.6 148 chrX 17122638 intron CG5004 + chrX 17122712 intron CG5004 + chrX 17122786 intron CG5004 + chrX_4_17120001 chrX_17120001 RAL-57 2553 chrX 17150767 17150823 chrX 17150943 17150999 28 176 5.0 7.5 6.2 3.9 232 chrX 17150767 intergenic CG5010 +,xmas-1 - chrX 17150883 intergenic CG5010 +,xmas-1 - chrX 17150999 intergenic xmas-1 -,CG5010 + chrX_28_17150001 chrX_17150001 RAL-57 2554 chrX 17195179 17195230 chrX 17200290 17200295 flea 17 5108 9.0 5.5 7.2 2.1 5116 chrX 17195179 3` UTR baz + chrX 17197737 3` UTR baz + chrX 17200295 3` UTR baz + chrX_17_17195001 chrX_17195001 RAL-57 2555 chrX 17205824 17205858 chrX 17205939 17205973 20 115 5.0 12.0 8.5 2.1 149 chrX 17205824 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205973 intergenic CG32564 + chrX_20_17205001 chrX_17205001 RAL-57 2556 chrX 17221803 17221857 chrX 17221914 17221968 17 111 6.5 8.5 7.5 2.0 165 chrX 17221803 intron CG5172 + chrX 17221886 intron CG5172 + chrX 17221968 intron CG5172 + chrX_17_17220001 chrX_17220001 RAL-57 2557 chrX 17273834 17273839 chrX 17273950 17273955 5 116 5.5 6.5 6.0 0.7 121 chrX 17273834 intron f + chrX 17273894 intron f + chrX 17273955 intron f + chrX_5_17270001 chrX_17270001 RAL-57 2558 chrX 17282852 17282892 chrX 17282955 17282974 10 100 5.5 0.0 2.8 2.6 122 chrX 17282852 intron CG5445 + chrX 17282913 5` UTR CG5445 + chrX 17282974 5` UTR CG5445 + chrX_10_17280001 chrX_17280001 RAL-57 2559 chrX 17290053 17290094 chrX 17290154 17290195 6 101 1.0 2.0 1.5 2.4 142 chrX 17290053 intron,intron CG5445 +,Fim - chrX 17290124 intron,intron CG5445 +,Fim - chrX 17290195 intron,intron CG5445 +,Fim - chrX_6_17290001 chrX_17290001 RAL-57 2560 chrX 17303586 17303605 chrX 17303683 17303706 8 100 11.5 4.0 7.8 0.9 120 chrX 17303586 intron CG5445 + chrX 17303646 intron CG5445 + chrX 17303706 intron CG5445 + chrX_8_17300001 chrX_17300001 RAL-57 2561 chrX 17352580 17352613 chrX 17352699 17352741 4 126 0.0 3.0 1.5 1.6 161 chrX 17352580 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352741 intergenic not near genes chrX_4_17350001 chrX_17350001 RAL-57 2562 chrX 17389615 17389659 chrX 17389729 17389772 4 114 1.0 2.5 1.8 1.4 157 chrX 17389615 intergenic not near genes chrX 17389694 intergenic not near genes chrX 17389772 intergenic not near genes chrX_4_17385001 chrX_17385001 RAL-57 2563 chrX 17443098 17443102 chrX 17443247 17443251 4 149 8.0 0.0 4.0 0.8 153 chrX 17443098 intron CG12994 - chrX 17443174 intron CG12994 - chrX 17443251 intron CG12994 - chrX_4_17440001 chrX_17440001 RAL-57 2564 chrX 17462757 17462804 chrX 17462921 17462973 13 162 7.5 1.5 4.5 2.4 216 chrX 17462757 intron CG43658 - chrX 17462865 intron CG43658 - chrX 17462973 intron CG43658 - chrX_13_17460001 chrX_17460001 RAL-57 2565 chrX 17538469 17538527 chrX 17538789 17538847 21 317 4.0 2.0 3.0 5.2 378 chrX 17538469 intron CG43658 - chrX 17538658 intron CG43658 - chrX 17538847 intron CG43658 - chrX_21_17535001 chrX_17535001 RAL-57 2566 chrX 17546946 17546997 chrX 17547104 17547155 12 158 1.5 2.0 1.8 4.3 209 chrX 17546946 intron CG43658 - chrX 17547050 intron CG43658 - chrX 17547155 intron CG43658 - chrX_12_17545001 chrX_17545001 RAL-57 2567 chrX 17657064 17657119 chrX 17657169 17657224 22 105 5.5 2.0 3.8 4.6 160 chrX 17657064 intergenic IntS2 -,beta-Spec + chrX 17657144 intergenic beta-Spec +,IntS2 - chrX 17657224 intergenic beta-Spec +,IntS2 - chrX_22_17655001 chrX_17655001 RAL-57 2568 chrX 17680880 17680921 chrX 17680974 17681023 13 99 3.5 4.0 3.8 2.7 143 chrX 17680880 intron chas - chrX 17680952 intron chas - chrX 17681023 intron chas - chrX_13_17680001 chrX_17680001 RAL-57 2569 chrX 17708817 17708857 chrX 17708919 17708961 16 103 7.0 11.0 9.0 1.6 144 chrX 17708817 intron CG8173 - chrX 17708889 intron CG8173 - chrX 17708961 intron CG8173 - chrX_16_17705001 chrX_17705001 RAL-57 2570 chrX 17743581 17743625 chrX 17743691 17743735 10 110 2.5 6.0 4.2 1.9 154 chrX 17743581 intron CG42684 + chrX 17743658 intron CG42684 + chrX 17743735 intron CG42684 + chrX_10_17740001 chrX_17740001 RAL-57 2571 chrX 17784458 17784485 chrX 17784559 17784586 9 101 0.0 4.5 2.2 2.8 128 chrX 17784458 intergenic not near genes chrX 17784522 intergenic not near genes chrX 17784586 intergenic not near genes chrX_9_17780001 chrX_17780001 RAL-57 2572 chrX 10469966 10469982 chrX 17836352 17836363 4 7366382 86.5 7.0 46.8 0.1 7366397 chrX 10469966 exon nocte - chrX 14153164 intergenic not near genes chrX 17836363 intron CG6398 + chrX_4_14150001 chrX_14150001 RAL-57 2573 chrX 17838083 17838116 chrX 17838186 17838219 6 103 3.5 3.0 3.2 1.4 136 chrX 17838083 intron CG6398 + chrX 17838151 intron CG6398 + chrX 17838219 intron CG6398 + chrX_6_17835001 chrX_17835001 RAL-57 2574 chrX 17968873 17968923 chrX 17969017 17969065 7 143 1.5 3.5 2.5 2.0 192 chrX 17968873 intron Sh - chrX 17968969 intron Sh - chrX 17969065 intron Sh - chrX_7_17965001 chrX_17965001 RAL-57 2575 chrX 18005324 18005348 chrX 18005524 18005548 10 199 6.5 7.5 7.0 1.2 224 chrX 18005324 intron Sh - chrX 18005436 intron Sh - chrX 18005548 intron Sh - chrX_10_18005001 chrX_18005001 RAL-57 2576 chrX 18005350 18005370 chrX 18005521 18005569 12 193 5.0 6.5 5.8 1.8 219 chrX 18005350 intron Sh - chrX 18005460 intron Sh - chrX 18005569 intron Sh - chrX_12_18005001 chrX_18005001 RAL-57 2577 chrX 18126577 18126837 chrX 18126724 18126939 20 129 4.0 2.5 3.2 4.8 362 chrX 18126577 intron CG32553 - chrX 18126758 intron CG32553 - chrX 18126939 intron CG32553 - chrX_20_18125001 chrX_18125001 RAL-57 2578 chrX 18175460 18175475 chrX 18175552 18175585 4 105 0.0 6.0 3.0 1.0 125 chrX 18175460 intergenic not near genes chrX 18175522 intergenic not near genes chrX 18175585 intergenic not near genes chrX_4_18175001 chrX_18175001 RAL-57 2579 chrX 18194045 18194100 chrX 18194605 18194660 BS 10 558 2.0 3.0 2.5 2.9 615 chrX 18194045 intron Frq2 + chrX 18194352 intron Frq2 + chrX 18194660 intron Frq2 + chrX_10_18190001 chrX_18190001 RAL-57 2580 chrX 18218034 18218062 chrX 18218176 18218204 10 142 1.5 6.5 4.0 2.0 170 chrX 18218034 intron CG33639 - chrX 18218119 intron CG33639 - chrX 18218204 intron CG33639 - chrX_10_18215001 chrX_18215001 RAL-57 2581 chrX 18262568 18262585 chrX 18262671 18262688 5 102 17.5 5.0 11.2 0.4 120 chrX 18262568 intergenic not near genes chrX 18262628 intergenic not near genes chrX 18262688 intergenic not near genes chrX_5_18260001 chrX_18260001 RAL-57 2582 chrX 18320488 18320501 chrX 18320645 18320658 4 157 0.0 2.0 1.0 2.0 170 chrX 18320488 intron CG6023 - chrX 18320573 intron CG6023 - chrX 18320658 intron CG6023 - chrX_4_18320001 chrX_18320001 RAL-57 2583 chrX 18344683 18344725 chrX 18344784 18344815 6 107 1.0 4.0 2.5 1.7 132 chrX 18344683 intron CG6123 - chrX 18344749 intron CG6123 - chrX 18344815 intron CG6123 - chrX_6_18340001 chrX_18340001 RAL-57 2584 chrX 18412775 18412833 chrX 18412900 18412942 31 122 7.0 9.5 8.2 3.4 167 chrX 18412775 intergenic not near genes chrX 18412858 intergenic not near genes chrX 18412942 intergenic not near genes chrX_31_18410001 chrX_18410001 RAL-57 2585 chrX 18427356 18427409 chrX 18427792 18427845 26 435 7.0 4.0 5.5 4.0 489 chrX 18427356 intergenic CG42323 + chrX 18427600 intergenic not near genes chrX 18427845 intergenic not near genes chrX_26_18425001 chrX_18425001 RAL-57 2586 chrX 18429474 18429519 chrX 18434810 18434855 Transpac 19 5336 10.0 8.0 9.0 1.9 5381 chrX 18429474 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434855 intergenic not near genes chrX_19_18430001 chrX_18430001 RAL-57 2587 chrX 18467199 18467256 chrX 18467388 18467445 22 187 5.0 4.0 4.5 4.0 246 chrX 18467199 intron CG32547 - chrX 18467322 intron CG32547 - chrX 18467445 intron CG32547 - chrX_22_18465001 chrX_18465001 RAL-57 2588 chrX 18529370 18529399 chrX 18529471 18529500 17 101 8.0 9.5 8.8 1.7 130 chrX 18529370 intron,3` UTR Bx +,CG15047 + chrX 18529435 intron,3` UTR Bx +,CG15047 + chrX 18529500 intron,3` UTR Bx +,CG15047 + chrX_17_18525001 chrX_18525001 RAL-57 2589 chrX 18558753 18558803 chrX 18558860 18558910 10 107 3.0 0.5 1.8 3.6 157 chrX 18558753 intron Bx + chrX 18558832 intron Bx + chrX 18558910 intron Bx + chrX_10_18555001 chrX_18555001 RAL-57 2590 chrX 12946233 12946235 chrX 18572525 18572526 25 5626291 12.5 29.0 20.8 1.1 5626293 chrX 12946233 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_25_15755001 chrX_15755001 RAL-57 2591 chrX 12946232 12946235 chrX 18572527 18572527 6 5626293 12.5 27.5 20.0 0.3 5626295 chrX 12946232 3` UTR fne + chrX 15759380 intron Graf - chrX 18572527 intergenic not near genes chrX_6_15755001 chrX_15755001 RAL-57 2592 chrX 18644991 18645007 chrX 18645114 18645130 8 121 8.5 1.5 5.0 1.3 139 chrX 18644991 intron Rip11 - chrX 18645060 intron Rip11 - chrX 18645130 intron Rip11 - chrX_8_18645001 chrX_18645001 RAL-57 2593 chrX 18645009 18645012 chrX 18645111 18645135 5 117 8.5 1.5 5.0 0.8 126 chrX 18645009 intron Rip11 - chrX 18645072 intron Rip11 - chrX 18645135 intron Rip11 - chrX_5_18645001 chrX_18645001 RAL-57 2594 chrX 18645013 18645045 chrX 18645110 18645168 17 120 4.5 1.5 3.0 4.2 155 chrX 18645013 intron Rip11 - chrX 18645090 intron Rip11 - chrX 18645168 intron Rip11 - chrX_17_18645001 chrX_18645001 RAL-57 2595 chrX 18698827 18698877 chrX 18698968 18699019 20 140 5.0 7.0 6.0 2.9 192 chrX 18698827 intergenic not near genes chrX 18698923 intergenic not near genes chrX 18699019 intergenic not near genes chrX_20_18695001 chrX_18695001 RAL-57 2596 chrX 18754311 18754339 chrX 18758003 18758031 297 5 3692 3.0 4.0 3.5 1.1 3720 chrX 18754311 intergenic not near genes chrX 18756171 intergenic not near genes chrX 18758031 intergenic not near genes chrX_5_18755001 chrX_18755001 RAL-57 2597 chrX 4617441 4617443 chrX 18826345 18826347 5 14208903 32.0 81.5 56.8 0.1 14208906 chrX 4617441 intergenic peb + chrX 11721894 exon Tango10 + chrX 18826347 intron CG42450 + chrX_5_11720001 chrX_11720001 RAL-57 2598 chrX 18896493 18896545 chrX 18896629 18896681 16 136 6.0 5.0 5.5 2.5 188 chrX 18896493 3` UTR CG7349 + chrX 18896587 intergenic CG7349 + chrX 18896681 intergenic CG7349 + chrX_16_18895001 chrX_18895001 RAL-57 2599 chrX 18926516 18926531 chrX 18926633 18926648 7 117 4.0 0.0 2.0 2.3 132 chrX 18926516 intergenic not near genes chrX 18926582 intergenic not near genes chrX 18926648 intergenic not near genes chrX_7_18925001 chrX_18925001 RAL-57 2600 chrX 18927602 18927611 chrX 18927713 18927722 4 111 7.0 6.5 6.8 0.5 120 chrX 18927602 intergenic not near genes chrX 18927662 intergenic not near genes chrX 18927722 intergenic not near genes chrX_4_18925001 chrX_18925001 RAL-57 2601 chrX 19020591 19020622 chrX 19020694 19020725 14 103 0.0 9.5 4.8 2.4 134 chrX 19020591 intron CG43759 + chrX 19020658 intron CG43759 + chrX 19020725 intron CG43759 + chrX_14_19020001 chrX_19020001 RAL-57 2602 chrX 19060384 19060432 chrX 19065193 19065241 Doc 16 4809 5.0 7.5 6.2 2.2 4857 chrX 19060384 intron CG14190 + chrX 19062812 intron CG14190 + chrX 19065241 intron CG14190 + chrX_16_19060001 chrX_19060001 RAL-57 2603 chrX 19073673 19073693 chrX 19073773 19073804 8 110 7.0 3.0 5.0 1.3 131 chrX 19073673 intergenic not near genes chrX 19073738 intergenic not near genes chrX 19073804 intergenic not near genes chrX_8_19070001 chrX_19070001 RAL-57 2604 chrX 19080303 19080354 chrX 19080434 19080485 20 130 5.5 9.5 7.5 2.4 182 chrX 19080303 intergenic not near genes chrX 19080394 intergenic not near genes chrX 19080485 intergenic not near genes chrX_20_19080001 chrX_19080001 RAL-57 2605 chrX 19097503 19097546 chrX 19097605 19097648 11 102 3.0 0.0 1.5 4.4 145 chrX 19097503 intergenic not near genes chrX 19097576 intergenic not near genes chrX 19097648 intergenic not near genes chrX_11_19095001 chrX_19095001 RAL-57 2606 chrX 19098754 19098780 chrX 19098857 19098883 5 103 0.5 1.5 1.0 2.5 129 chrX 19098754 intergenic not near genes chrX 19098818 intergenic not near genes chrX 19098883 intergenic not near genes chrX_5_19095001 chrX_19095001 RAL-57 2607 chrX 19109118 19109140 chrX 19109300 19109333 6 198 0.0 1.5 0.8 3.3 215 chrX 19109118 intergenic not near genes chrX 19109226 intergenic not near genes chrX 19109333 intergenic not near genes chrX_6_19105001 chrX_19105001 RAL-57 2608 chrX 19120369 19120382 chrX 19120485 19120498 4 116 16.5 3.5 10.0 0.4 129 chrX 19120369 intergenic not near genes chrX 19120434 intergenic not near genes chrX 19120498 intergenic not near genes chrX_4_19120001 chrX_19120001 RAL-57 2609 chrX 19124416 19124461 chrX 19124523 19124575 12 112 4.0 1.5 2.8 3.2 159 chrX 19124416 intergenic CG15882 - chrX 19124496 intergenic CG15882 - chrX 19124575 intergenic CG15882 -,tgy - chrX_12_19120001 chrX_19120001 RAL-57 2610 chrX 19125654 19125691 chrX 19125763 19125797 5 106 15.5 8.5 12.0 0.4 143 chrX 19125654 intron tgy - chrX 19125726 intron tgy - chrX 19125797 intron tgy - chrX_5_19125001 chrX_19125001 RAL-57 2611 chrX 19136529 19136584 chrX 19143474 19143527 412 25 6944 5.5 2.0 3.8 5.2 6998 chrX 19136529 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143527 3` UTR RhoGAP18B - chrX_25_19140001 chrX_19140001 RAL-57 2612 chrX 19147888 19147924 chrX 19147988 19147995 11 93 4.0 3.0 3.5 2.4 107 chrX 19147888 intron RhoGAP18B - chrX 19147942 intron RhoGAP18B - chrX 19147995 intron RhoGAP18B - chrX_11_19145001 chrX_19145001 RAL-57 2613 chrX 19356977 19357018 chrX 19358443 19358502 NOF 4 1470 4.0 0.5 2.2 1.2 1525 chrX 19356977 intron kek5 + chrX 19357740 intron kek5 + chrX 19358502 intron kek5 + chrX_4_19355001 chrX_19355001 RAL-57 2614 chrX 19380140 19380176 chrX 19380406 19380442 pogo 5 266 4.0 2.5 3.2 1.2 302 chrX 19380140 intron kek5 + chrX 19380291 intron kek5 + chrX 19380442 intron kek5 + chrX_5_19380001 chrX_19380001 RAL-57 2615 chrX 16983077 16983077 chrX 19404960 19404963 4 2421885 7.0 4.0 5.5 0.6 2421886 chrX 16983077 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404963 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-57 2616 chrX 16983076 16983077 chrX 19404964 19404965 11 2421888 7.0 4.0 5.5 1.7 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_11_18190001 chrX_18190001 RAL-57 2617 chrX 19461129 19461175 chrX 19461243 19461280 5 116 2.5 3.0 2.8 1.3 151 chrX 19461129 intron kek5 + chrX 19461204 intron kek5 + chrX 19461280 intron kek5 + chrX_5_19460001 chrX_19460001 RAL-57 2618 chrX 19472107 19472123 chrX 19472702 19472718 jockey 7 593 10.0 5.5 7.8 0.8 611 chrX 19472107 intergenic kek5 + chrX 19472412 intergenic kek5 + chrX 19472718 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-57 2619 chrX 19472130 19472157 chrX 19472701 19472751 jockey 9 585 5.0 5.5 5.2 1.5 621 chrX 19472130 intergenic kek5 + chrX 19472440 intergenic not near genes chrX 19472751 intergenic not near genes chrX_9_19470001 chrX_19470001 RAL-57 2620 chrX 19593928 19593974 chrX 19594037 19594083 11 109 3.5 5.0 4.2 2.1 155 chrX 19593928 exon CG14205 + chrX 19594006 intron CG14205 + chrX 19594083 exon CG14205 + chrX_11_19590001 chrX_19590001 RAL-57 2621 chrX 19662005 19662056 chrX 19662253 19662303 33 247 7.0 5.0 6.0 4.7 298 chrX 19662005 intron CG14223 - chrX 19662154 intron CG14223 - chrX 19662303 intron CG14223 - chrX_33_19660001 chrX_19660001 RAL-57 2622 chrX 19710048 19710104 chrX 19711859 19711909 S-element 45 1808 9.5 9.0 9.2 4.4 1861 chrX 19710048 intron meso18E - chrX 19710978 intron meso18E - chrX 19711909 intron meso18E - chrX_45_19710001 chrX_19710001 RAL-57 2623 chrX 19744630 19744663 chrX 19744754 19744796 8 126 55.5 58.5 57.0 0.1 166 chrX 19744630 5` UTR,exon CG33932 +,Rpp20 + chrX 19744713 intron,intron CG33932 +,Rpp20 + chrX 19744796 5` UTR,exon CG33932 +,Rpp20 + chrX_8_19740001 chrX_19740001 RAL-57 2624 chrX 19769371 19769418 chrX 19769471 19769526 22 102 5.0 4.5 4.8 3.8 155 chrX 19769371 3` UTR vfl - chrX 19769448 exon vfl - chrX 19769526 intron vfl - chrX_22_19765001 chrX_19765001 RAL-57 2625 chrX 19797328 19797338 chrX 19804670 19804680 Stalker4 4 7342 9.0 5.0 7.0 0.5 7352 chrX 19797328 intergenic not near genes chrX 19801004 intergenic not near genes chrX 19804680 intergenic not near genes chrX_4_19800001 chrX_19800001 RAL-57 2626 chrX 19827328 19827371 chrX 19827429 19827474 14 103 5.0 1.0 3.0 3.5 146 chrX 19827328 intergenic not near genes chrX 19827401 intergenic not near genes chrX 19827474 intergenic not near genes chrX_14_19825001 chrX_19825001 RAL-57 2627 chrX 19838486 19838528 chrX 19838588 19838630 8 101 9.0 5.0 7.0 1.0 144 chrX 19838486 intron pico - chrX 19838558 intron pico - chrX 19838630 intron pico - chrX_8_19835001 chrX_19835001 RAL-57 2628 chrX 19983408 19983529 chrX 19983518 19983713 7 172 0.0 0.0 0.0 7.0 305 chrX 19983408 intergenic not near genes chrX 19983560 intergenic not near genes chrX 19983713 intergenic not near genes chrX_7_19980001 chrX_19980001 RAL-57 2629 chrX 20105196 20105211 chrX 20105307 20105323 4 110 37.5 51.0 44.2 0.1 127 chrX 20105196 intergenic not near genes chrX 20105260 intergenic not near genes chrX 20105323 intergenic not near genes chrX_4_20105001 chrX_20105001 RAL-57 2630 chrX 20125376 20125397 chrX 20125483 20125504 7 107 0.0 5.0 2.5 2.0 128 chrX 20125376 intergenic CG34331 + chrX 20125440 intergenic CG34331 + chrX 20125504 intergenic CG34331 + chrX_7_20125001 chrX_20125001 RAL-57 2631 chrX 20125734 20125756 chrX 20125836 20125858 7 101 7.5 6.5 7.0 0.9 124 chrX 20125734 intergenic CG34331 + chrX 20125796 intergenic not near genes chrX 20125858 intergenic not near genes chrX_7_20125001 chrX_20125001 RAL-57 2632 chrX 20126889 20126913 chrX 20126967 20127010 8 80 2.5 2.0 2.2 2.5 121 chrX 20126889 intergenic not near genes chrX 20126950 intergenic not near genes chrX 20127010 intergenic not near genes chrX_8_20125001 chrX_20125001 RAL-57 2633 chrX 20132281 20132308 chrX 20132389 20132408 7 106 10.5 9.0 9.8 0.6 127 chrX 20132281 intergenic not near genes chrX 20132344 intergenic not near genes chrX 20132408 intergenic not near genes chrX_7_20130001 chrX_20130001 RAL-57 2634 chrX 20271483 20271518 chrX 20271600 20271635 12 117 5.5 0.0 2.8 3.2 152 chrX 20271483 intergenic not near genes chrX 20271559 intergenic not near genes chrX 20271635 intergenic not near genes chrX_12_20270001 chrX_20270001 RAL-57 2635 chrX 20279728 20279773 chrX 20279834 20279879 10 106 10.5 5.5 8.0 1.1 151 chrX 20279728 intergenic not near genes chrX 20279804 intergenic not near genes chrX 20279879 intergenic not near genes chrX_10_20275001 chrX_20275001 RAL-57 2636 chrX 20312855 20312905 chrX 20312958 20313007 24 103 4.0 3.0 3.5 5.3 152 chrX 20312855 intron CG1504 - chrX 20312931 intron CG1504 - chrX 20313007 intron CG1504 - chrX_24_20310001 chrX_20310001 RAL-57 2637 chrX 20326256 20326268 chrX 20326367 20326379 4 110 4.5 8.0 6.2 0.6 123 chrX 20326256 intron CG1504 - chrX 20326318 intron CG1504 - chrX 20326379 intron CG1504 - chrX_4_20325001 chrX_20325001 RAL-57 2638 chrX 20359115 20359170 chrX 20359214 20359273 26 98 5.5 5.0 5.2 4.2 158 chrX 20359115 intergenic not near genes chrX 20359194 intergenic not near genes chrX 20359273 intergenic not near genes chrX_26_20355001 chrX_20355001 RAL-57 2639 chrX 20369296 20369305 chrX 20369405 20369412 5 108 11.5 5.0 8.2 0.5 116 chrX 20369296 intergenic not near genes chrX 20369354 intergenic not near genes chrX 20369412 intergenic not near genes chrX_5_20365001 chrX_20365001 RAL-57 2640 chrX 20369307 20369343 chrX 20369403 20369452 21 105 5.0 5.0 5.0 3.5 145 chrX 20369307 intergenic not near genes chrX 20369380 intergenic not near genes chrX 20369452 intergenic not near genes chrX_21_20365001 chrX_20365001 RAL-57 2641 chrX 20377325 20377333 chrX 20378817 20378825 hobo 8 1492 11.5 13.5 12.5 0.6 1500 chrX 20377325 intergenic not near genes chrX 20378075 intergenic not near genes chrX 20378825 intergenic not near genes chrX_8_20375001 chrX_20375001 RAL-57 2642 chrX 20377340 20377344 chrX 20378803 20378836 hobo 4 1480 11.0 11.0 11.0 0.3 1496 chrX 20377340 intergenic not near genes chrX 20378088 intergenic not near genes chrX 20378836 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-57 2643 chrX 20383779 20383827 chrX 20383893 20383936 15 123 4.5 0.5 2.5 4.3 157 chrX 20383779 intergenic not near genes chrX 20383858 intergenic not near genes chrX 20383936 intergenic not near genes chrX_15_20380001 chrX_20380001 RAL-57 2644 chrX 20384241 20384284 chrX 20384349 20384392 6 108 1.5 3.5 2.5 1.7 151 chrX 20384241 intergenic not near genes chrX 20384316 intergenic not near genes chrX 20384392 intergenic not near genes chrX_6_20380001 chrX_20380001 RAL-57 2645 chrX 20443173 20443205 chrX 20443254 20443306 7 98 5.0 7.0 6.0 1.0 133 chrX 20443173 exon CG1695 + chrX 20443240 intron CG1695 + chrX 20443306 intron CG1695 + chrX_7_20440001 chrX_20440001 RAL-57 2646 chrX 20467990 20468022 chrX 20468104 20468136 5 114 2.5 0.0 1.2 2.3 146 chrX 20467990 intron GstT3 + chrX 20468063 intron GstT3 + chrX 20468136 intron GstT3 + chrX_5_20465001 chrX_20465001 RAL-57 2647 chrX 20480344 20480393 chrX 20480765 20480814 19 421 5.0 5.5 5.2 3.1 470 chrX 20480344 intron RhoGAP19D - chrX 20480579 intron RhoGAP19D - chrX 20480814 intron RhoGAP19D - chrX_19_20480001 chrX_20480001 RAL-57 2648 chrX 20504112 20504154 chrX 20505645 20505676 transib2 13 1540 5.0 5.0 5.0 2.2 1564 chrX 20504112 intron RhoGAP19D - chrX 20504894 intron RhoGAP19D - chrX 20505676 intron RhoGAP19D - chrX_13_20500001 chrX_20500001 RAL-57 2649 chrX 20546525 20546568 chrX 20546715 20546759 6 190 1.0 1.0 1.0 3.0 234 chrX 20546525 intron RunxB + chrX 20546642 intron RunxB + chrX 20546759 intron RunxB + chrX_6_20545001 chrX_20545001 RAL-57 2650 chrX 20578054 20578097 chrX 20578158 20578201 5 103 2.5 1.0 1.8 1.8 147 chrX 20578054 intergenic not near genes chrX 20578128 intergenic not near genes chrX 20578201 intergenic not near genes chrX_5_20575001 chrX_20575001 RAL-57 2651 chrX 20593799 20593816 chrX 20593924 20593939 6 122 9.0 5.0 7.0 0.8 140 chrX 20593799 intron RunxA - chrX 20593869 intron RunxA - chrX 20593939 intron RunxA - chrX_6_20590001 chrX_20590001 RAL-57 2652 chrX 20635423 20635441 chrX 20635614 20635632 6 191 0.5 1.5 1.0 3.0 209 chrX 20635423 intergenic not near genes chrX 20635528 intergenic not near genes chrX 20635632 intergenic not near genes chrX_6_20635001 chrX_20635001 RAL-57 2653 chrX 20704135 20704182 chrX 20704421 20704429 5 278 0.5 1.0 0.8 2.8 294 chrX 20704135 intergenic not near genes chrX 20704282 intergenic not near genes chrX 20704429 intergenic not near genes chrX_5_20700001 chrX_20700001 RAL-57 2654 chrX 20708371 20708381 chrX 20708460 20708465 4 90 13.0 8.0 10.5 0.3 94 chrX 20708371 intergenic not near genes chrX 20708418 intergenic not near genes chrX 20708465 intergenic not near genes chrX_4_20705001 chrX_20705001 RAL-57 2655 chrX 20710416 20710435 chrX 20710518 20710537 5 102 2.0 4.5 3.2 1.2 121 chrX 20710416 intergenic not near genes chrX 20710476 intergenic not near genes chrX 20710537 intergenic not near genes chrX_5_20710001 chrX_20710001 RAL-57 2656 chrX 20719185 20719198 chrX 20719534 20719556 8 357 8.5 10.0 9.2 0.8 371 chrX 20719185 intergenic not near genes chrX 20719370 intergenic not near genes chrX 20719556 intergenic not near genes chrX_8_20715001 chrX_20715001 RAL-57 2657 chrX 20780213 20780233 chrX 20780463 20780483 4 250 3.0 4.5 3.8 0.8 270 chrX 20780213 intron,3` UTR shakB -,CG32507 - chrX 20780348 intron,3` UTR shakB -,CG32507 - chrX 20780483 intron,3` UTR shakB -,CG32507 - chrX_4_20780001 chrX_20780001 RAL-57 2658 chrX 20791543 20791811 chrX 20791668 20791912 5 111 4.5 6.5 5.5 0.8 369 chrX 20791543 intron shakB - chrX 20791728 intron shakB - chrX 20791912 intron shakB - chrX_5_20790001 chrX_20790001 RAL-57 2659 chrX 20940700 20940744 chrX 20942194 20942219 hobo 13 1490 3.5 2.0 2.8 3.4 1519 chrX 20940700 intergenic not near genes chrX 20941460 intergenic not near genes chrX 20942219 intergenic not near genes chrX_13_20940001 chrX_20940001 RAL-57 2660 chrX 21022212 21022237 chrX 21022406 21022431 9 194 0.5 2.5 1.5 3.6 219 chrX 21022212 intergenic not near genes chrX 21022322 intergenic not near genes chrX 21022431 intergenic not near genes chrX_9_21020001 chrX_21020001 RAL-57 2661 chrX 21029803 21029812 chrX 21029968 21029978 5 166 5.5 4.0 4.8 0.9 175 chrX 21029803 3` UTR CG1529 - chrX 21029890 3` UTR CG1529 - chrX 21029978 3` UTR CG1529 - chrX_5_21025001 chrX_21025001 RAL-57 2662 chrX 21032606 21032642 chrX 21032720 21032775 9 126 5.0 2.0 3.5 2.0 169 chrX 21032606 intergenic not near genes chrX 21032690 intergenic not near genes chrX 21032775 intergenic not near genes chrX_9_21030001 chrX_21030001 RAL-57 2663 chrX 21049235 21049251 chrX 21049340 21049356 5 105 4.5 3.5 4.0 1.0 121 chrX 21049235 intergenic Cbs + chrX 21049296 intergenic Cbs + chrX 21049356 intergenic Cbs + chrX_5_21045001 chrX_21045001 RAL-57 2664 chrX 21049744 21049749 chrX 21049853 21049858 4 109 3.0 6.5 4.8 0.7 114 chrX 21049744 intergenic CG1518 - chrX 21049801 intergenic CG1518 - chrX 21049858 intergenic CG1518 - chrX_4_21045001 chrX_21045001 RAL-57 2665 chrX 21055680 21055719 chrX 21055776 21055820 12 100 5.0 6.0 5.5 1.8 140 chrX 21055680 intron bves + chrX 21055750 intron bves + chrX 21055820 intron bves + chrX_12_21055001 chrX_21055001 RAL-57 2666 chrX 21076337 21076354 chrX 21076407 21076458 6 98 2.5 0.0 1.2 2.7 121 chrX 21076337 intron bves + chrX 21076398 intron bves + chrX 21076458 intron bves + chrX_6_21075001 chrX_21075001 RAL-57 2667 chrX 21077590 21077616 chrX 21077701 21077730 7 113 1.5 5.0 3.2 1.7 140 chrX 21077590 intron bves + chrX 21077660 intron bves + chrX 21077730 intron bves + chrX_7_21075001 chrX_21075001 RAL-57 2668 chrX 21078753 21078781 chrX 21078855 21078884 8 102 2.0 1.0 1.5 3.2 131 chrX 21078753 intron bves + chrX 21078818 intron bves + chrX 21078884 intron bves + chrX_8_21075001 chrX_21075001 RAL-57 2669 chrX 21086111 21086157 chrX 21087165 21087211 jockey 7 1054 3.0 3.5 3.2 1.7 1100 chrX 21086111 intergenic not near genes chrX 21086661 intergenic not near genes chrX 21087211 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-57 2670 chrX 21088016 21088073 chrX 21088173 21088230 14 155 1.5 2.0 1.8 5.0 214 chrX 21088016 intergenic not near genes chrX 21088123 intergenic not near genes chrX 21088230 intergenic not near genes chrX_14_21085001 chrX_21085001 RAL-57 2671 chrX 21197064 21197082 chrX 21197135 21197184 4 94 1.0 2.0 1.5 1.6 120 chrX 21197064 intergenic not near genes chrX 21197124 intergenic not near genes chrX 21197184 intergenic not near genes chrX_4_21195001 chrX_21195001 RAL-57 2672 chrX 21247860 21247911 chrX 21247996 21248048 8 137 3.5 1.0 2.2 2.5 188 chrX 21247860 intron CG32521 - chrX 21247954 intron CG32521 - chrX 21248048 intron CG32521 - chrX_8_21245001 chrX_21245001 RAL-57 2673 chrX 21308873 21308925 chrX 21308981 21309053 7 125 0.0 0.0 0.0 7.0 180 chrX 21308873 exon CG1801 - chrX 21308963 intron CG1801 - chrX 21309053 intron CG1801 - chrX_7_21305001 chrX_21305001 RAL-57 2674 chrX 21328092 21328144 chrX 21328228 21328280 21 136 5.5 5.5 5.5 3.2 188 chrX 21328092 3` UTR CG1486 + chrX 21328186 intergenic CG1486 +,tty - chrX 21328280 intergenic CG1486 +,tty - chrX_21_21325001 chrX_21325001 RAL-57 2675 chrX 21402748 21402789 chrX 21402853 21402861 12 104 5.5 4.5 5.0 2.0 113 chrX 21402748 5` UTR CG1678 - chrX 21402804 intergenic CG1678 - chrX 21402861 intergenic CG1678 - chrX_12_21400001 chrX_21400001 RAL-57 2676 chrX 21410467 21410477 chrX 21410574 21410585 4 108 5.5 0.0 2.8 1.1 118 chrX 21410467 3` UTR CR45003 - chrX 21410526 3` UTR CR45003 - chrX 21410585 intergenic CR45003 - chrX_4_21410001 chrX_21410001 RAL-57 2677 chrX 21419195 21419233 chrX 21419305 21419343 5 109 1.5 1.5 1.5 2.0 148 chrX 21419195 intergenic not near genes chrX 21419269 intergenic not near genes chrX 21419343 intergenic not near genes chrX_5_21415001 chrX_21415001 RAL-57 2678 chrX 21419679 21419734 chrX 21419793 21419848 4 102 1.5 2.0 1.8 1.4 169 chrX 21419679 intergenic not near genes chrX 21419764 intergenic not near genes chrX 21419848 intergenic not near genes chrX_4_21415001 chrX_21415001 RAL-57 2679 chrX 21455194 21455220 chrX 21455398 21455432 4 206 3.0 0.0 1.5 1.6 238 chrX 21455194 intron CG42343 - chrX 21455313 intron CG42343 - chrX 21455432 intron CG42343 - chrX_4_21455001 chrX_21455001 RAL-57 2680 chrX 21458668 21458731 chrX 21464127 21464192 Ivk 19 5460 3.5 2.5 3.0 4.8 5524 chrX 21458668 intergenic not near genes chrX 21461430 intergenic not near genes chrX 21464192 intergenic not near genes chrX_19_21460001 chrX_21460001 RAL-57 2681 chrX 21565393 21565440 chrX 21565496 21565543 8 103 2.0 3.0 2.5 2.3 150 chrX 21565393 intergenic not near genes chrX 21565468 intergenic not near genes chrX 21565543 intergenic not near genes chrX_8_21565001 chrX_21565001 RAL-57 2682 chrX 21567938 21567962 chrX 21568038 21568055 5 101 18.0 1.0 9.5 0.5 117 chrX 21567938 intergenic not near genes chrX 21567996 intergenic not near genes chrX 21568055 intergenic not near genes chrX_5_21565001 chrX_21565001 RAL-57 2683 chrX 21575520 21575553 chrX 21575624 21575657 5 104 0.5 1.0 0.8 2.8 137 chrX 21575520 intergenic not near genes chrX 21575588 intergenic not near genes chrX 21575657 intergenic not near genes chrX_5_21575001 chrX_21575001 RAL-57 2684 chrX 21668233 21668290 chrX 21668343 21668400 7 107 2.0 1.5 1.8 2.5 167 chrX 21668233 intergenic not near genes chrX 21668316 intergenic not near genes chrX 21668400 intergenic not near genes chrX_7_21665001 chrX_21665001 RAL-57 2685 chrX 22478871 22478898 chrX 22479029 22479056 6 158 0.0 5.5 2.8 1.6 185 chrX 22478871 intron CG12576 - chrX 22478964 intron CG12576 - chrX 22479056 intron CG12576 - chrX_6_22475001 chrX_22475001 RAL-57 2686 chrX 22660550 22660601 chrX 22660656 22660709 8 108 3.0 2.0 2.5 2.3 159 chrX 22660550 intron CR44997 + chrX 22660630 intron CR44997 + chrX 22660709 intron CR44997 + chrX_8_22660001 chrX_22660001 RAL-57 2687 chrX 22677272 22677323 chrX 22677506 22677547 6 229 2.0 0.5 1.2 2.7 275 chrX 22677272 intron CR44997 + chrX 22677410 intron CR44997 + chrX 22677547 intron CR44997 + chrX_6_22675001 chrX_22675001 RAL-57 2688 chrX 22681458 22681470 chrX 22688939 22688950 HMS-Beagle2 4 7480 3.5 2.0 2.8 1.1 7492 chrX 22681458 intron CR44997 + chrX 22685204 intron CR44997 + chrX 22688950 intron CR44997 + chrX_4_22685001 chrX_22685001 RAL-57 2689 chrX 22697482 22697518 chrX 22701804 22701840 Juan 8 4322 3.5 3.5 3.5 1.8 4358 chrX 22697482 intron CR44997 + chrX 22699661 intron CR44997 + chrX 22701840 intron CR44997 + chrX_8_22695001 chrX_22695001 RAL-57 2690 chrX 22784052 22784101 chrX 22784160 22784209 18 108 4.0 4.0 4.0 3.6 157 chrX 22784052 intron CR44997 + chrX 22784130 intron CR44997 + chrX 22784209 intron CR44997 + chrX_18_22780001 chrX_22780001 RAL-57 2691 chrX 22811972 22812003 chrX 22816769 22816800 F-element 13 4797 11.5 11.0 11.2 1.1 4828 chrX 22811972 intergenic CG12446 - chrX 22814386 intergenic not near genes chrX 22816800 intergenic not near genes chrX_13_22810001 chrX_22810001 RAL-57 2692 chrX 22820960 22820985 chrX 22821173 22821198 6 213 1.0 2.5 1.8 2.1 238 chrX 22820960 intergenic not near genes chrX 22821079 intergenic not near genes chrX 22821198 intergenic not near genes chrX_6_22820001 chrX_22820001 RAL-57 2693 chrX 22867954 22868010 chrX 22868092 22868157 26 139 8.0 5.0 6.5 3.5 203 chrX 22867954 exon CG42346 + chrX 22868056 intron CG42346 + chrX 22868157 intron CG42346 + chrX_26_22865001 chrX_22865001 RAL-57 2694 chrX 22987085 22987132 chrX 22989769 22989816 Burdock 14 2682 3.5 6.0 4.8 2.4 2731 chrX 22987085 intron,intron stnA -,stnB - chrX 22988450 intron,intron stnA -,stnB - chrX 22989816 intron,intron stnA -,stnB - chrX_14_22985001 chrX_22985001 RAL-57 2695 chrX 22996289 22996337 chrX 23003548 23003595 roo 14 7258 5.0 3.0 4.0 2.8 7306 chrX 22996289 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003595 intron,intron stnA -,stnB - chrX_14_22995001 chrX_22995001 RAL-57 2696 chrY 864694 864731 chrY 864794 864832 4 100 25.0 20.5 22.8 0.2 138 chrY 864694 intergenic not near genes chrY 864763 intergenic not near genes chrY 864832 intergenic not near genes chrY_4_860001 chrY_860001 RAL-57 2697 chrY 1419888 1419912 chrY 1420157 1420191 6 272 5.0 4.5 4.8 1.0 303 chrY 1419888 intergenic not near genes chrY 1420040 intergenic not near genes chrY 1420191 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-57 2698 chrY 1420499 1420699 chrY 1420754 1420798 4 182 3.0 4.5 3.8 0.8 299 chrY 1420499 intergenic not near genes chrY 1420648 intergenic not near genes chrY 1420798 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-57