SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	126743	126771	pogo	2095	2090	5	28	'1-4	74.92	2.4	1.5	intron,intron	CG11455 +,CG3164 -	chr2L_5_125001	chr2L_125001	0.20	RAL-563
2	chr2L	162073	162120	1360	3379	22	13	47	'6-7	72.17	8.4	1.4	intron	spen +	chr2L_13_160001	chr2L_160001	0.46	RAL-563
3	chr2L	634701	634716	roo	407	404	4	15	'2-2	61.95	0.8	2.2	intergenic	not near genes	chr2L_4_630001	chr2L_630001	0.50	RAL-563
4	chr2L	903823	903882	1360	17	3387	11	59	'6-5	67.50	5.1	1.8	intergenic	CR45261 +	chr2L_11_900001	chr2L_900001	0.55	RAL-563
5	chr2L	1134339	1134404	mdg1	411	6	6	65	'2-4	61.56	2.6	1.7	intergenic	Iris -,CG4577 +	chr2L_6_1130001	chr2L_1130001	0.33	RAL-563
6	chr2L	1202449	1202476	blood	7010	27	7	27	'2-5	62.46	5.1	1.1	intergenic	not near genes	chr2L_7_1200001	chr2L_1200001	0.29	RAL-563
7	chr2L	1369465	1369523	Transpac	4941	308	4	58	'1-3	66.19	3.9	0.8	intergenic	CG14346 +	chr2L_4_1365001	chr2L_1365001	0.25	RAL-563
8	chr2L	1734408	1734498	roo	8883	8670	7	90	'3-4	66.42	6.0	1.0	intron	CG17646 +	chr2L_7_1730001	chr2L_1730001	0.43	RAL-563
9	chr2L	2093850	2093914	pogo	1	2082	7	64	'3-4	72.90	3.4	1.6	intron	dpr3 -	chr2L_7_2090001	chr2L_2090001	0.43	RAL-563
10	chr2L	2202914	2202973	P-element	2870	2886	8	59	'2-6	56.38	7.7	0.9	intergenic	not near genes	chr2L_8_2200001	chr2L_2200001	0.25	RAL-563
11	chr2L	2286166	2286195	jockey	22	9	10	29	'4-6	59.21	12.1	0.8	exon	CG31681 -	chr2L_10_2285001	chr2L_2285001	0.40	RAL-563
12	chr2L	2464278	2464293	pogo	2083	2096	4	15	'3-1	61.61	5.1	0.7	intergenic	not near genes	chr2L_4_2460001	chr2L_2460001	0.75	RAL-563
13	chr2L	2565526	2565558	opus	498	7470	8	32	'3-5	68.92	7.1	1.0	exon	Cyp309a2 -	chr2L_8_2565001	chr2L_2565001	0.38	RAL-563
14	chr2L	2721167	2721244	roo	8667	408	9	77	'3-6	64.53	1.2	4.1	intergenic	not near genes	chr2L_9_2720001	chr2L_2720001	0.33	RAL-563
15	chr2L	3118153	3118222	Transpac	329	5224	4	69	'1-3	47.33	0.8	2.2	intron	toc -	chr2L_4_3115001	chr2L_3115001	0.25	RAL-563
16	chr2L	3294604	3294684	blood	7387	7010	8	80	'3-5	62.18	5.1	1.3	5` UTR	CG9664 -	chr2L_8_3290001	chr2L_3290001	0.38	RAL-563
17	chr2L	3470825	3470876	412	7070	7534	4	51	'2-2	55.66	6.3	0.5	exon	CG31776 +	chr2L_4_3470001	chr2L_3470001	0.50	RAL-563
18	chr2L	3762943	3762960	jockey	20	5	5	17	'2-3	58.16	5.6	0.8	intron	CG43707 +	chr2L_5_3760001	chr2L_3760001	0.40	RAL-563
19	chr2L	3771650	3771718	P-element	1	2882	10	68	'8-2	50.67	8.6	1.0	intergenic	bowl +	chr2L_10_3770001	chr2L_3770001	0.80	RAL-563
20	chr2L	3879963	3880014	17.6	6940	477	6	51	'3-3	67.99	2.4	1.8	intron	capu -	chr2L_6_3875001	chr2L_3875001	0.50	RAL-563
21	chr2L	4415826	4415849	jockey	6	29	5	23	'2-3	58.60	8.8	0.5	intron	CG15431 -	chr2L_5_4415001	chr2L_4415001	0.40	RAL-563
22	chr2L	4434264	4434311	FB	9	7	5	47	'4-1	57.80	11.1	0.4	intron,intron,intron	CG15431 -,CG34177 +,CG34178 +	chr2L_5_4430001	chr2L_4430001	0.80	RAL-563
23	chr2L	4635521	4635578	pogo	8	2093	5	57	'3-2	62.85	3.4	1.1	intergenic	not near genes	chr2L_5_4635001	chr2L_4635001	0.60	RAL-563
24	chr2L	4656831	4656909	roo	8677	9068	4	78	'2-2	64.33	4.3	0.8	intergenic	not near genes	chr2L_4_4655001	chr2L_4655001	0.50	RAL-563
25	chr2L	5044829	5044912	412	496	11	7	83	'5-2	55.79	1.8	2.5	intron,intron,intron	CG33995 +,CG44000 +,CG44001 +	chr2L_7_5040001	chr2L_5040001	0.71	RAL-563
26	chr2L	5202498	5202544	springer	2	7487	4	46	'3-1	72.24	3.5	0.9	intron,5` UTR	Msp300 +,snoRNA:Psi18S-525k +	chr2L_4_5200001	chr2L_5200001	0.75	RAL-563
27	chr2L	5305379	5305432	hopper	22	1411	7	53	'3-4	66.03	11.2	0.6	intron	vri +	chr2L_7_5305001	chr2L_5305001	0.43	RAL-563
28	chr2L	5561090	5561139	hobo	17	2927	9	49	'2-7	62.48	5.0	1.5	intron	GluRIIB +	chr2L_9_5560001	chr2L_5560001	0.22	RAL-563
29	chr2L	5790876	5790928	FB	12	12	6	52	'2-4	61.90	2.4	1.8	intron	CG9171 -	chr2L_6_5790001	chr2L_5790001	0.33	RAL-563
30	chr2L	6157992	6158041	412	7538	7071	6	49	'2-4	60.16	0.6	3.8	intergenic	not near genes	chr2L_6_6155001	chr2L_6155001	0.33	RAL-563
31	chr2L	7614193	7614240	roo	8672	9046	5	47	'3-2	66.85	6.6	0.7	exon	CG6739 +	chr2L_5_7610001	chr2L_7610001	0.60	RAL-563
32	chr2L	7705132	7705152	roo	403	9046	4	20	'2-2	63.33	15.0	0.2	intron	Tep3 +	chr2L_4_7705001	chr2L_7705001	0.50	RAL-563
33	chr2L	8205105	8205187	P-element	2796	2	23	82	'6-17	48.69	4.4	4.3	5` UTR,5` UTR	SLC5A11 -,CR44119 +	chr2L_23_8205001	chr2L_8205001	0.26	RAL-563
34	chr2L	8950779	8950818	1360	12	3361	8	39	'5-3	67.86	5.6	1.2	5` UTR	C1GalTA -	chr2L_8_8950001	chr2L_8950001	0.62	RAL-563
35	chr2L	9010437	9010493	1360	6	3376	8	56	'7-1	59.39	4.0	1.6	intergenic	CG9568 +	chr2L_8_9010001	chr2L_9010001	0.88	RAL-563
36	chr2L	9019587	9019633	P-element	30	2886	5	46	'1-4	45.26	10.7	0.4	intergenic	not near genes	chr2L_5_9015001	chr2L_9015001	0.20	RAL-563
37	chr2L	9139326	9139427	blood	7298	368	11	101	'4-7	62.01	3.0	2.8	intron	CG32982 +	chr2L_11_9135001	chr2L_9135001	0.36	RAL-563
38	chr2L	9487499	9487535	hobo	2921	23	4	36	'1-3	66.23	6.1	0.6	intergenic	not near genes	chr2L_4_9485001	chr2L_9485001	0.25	RAL-563
39	chr2L	9685671	9685714	roo	9047	8677	8	43	'5-3	71.45	2.7	2.2	intron	Pka-C1 -	chr2L_8_9685001	chr2L_9685001	0.62	RAL-563
40	chr2L	9874647	9874692	hobo	2679	2933	4	45	'1-3	65.09	3.8	0.8	intron	nAChRalpha6 -	chr2L_4_9870001	chr2L_9870001	0.25	RAL-563
41	chr2L	10305832	10305861	Burdock	6164	6366	4	29	'1-3	76.67	2.6	1.1	intron	CG5390 -	chr2L_4_10305001	chr2L_10305001	0.25	RAL-563
42	chr2L	10500031	10500092	297	6961	6588	5	61	'1-4	64.69	1.4	2.1	intron	Myo31DF -	chr2L_5_10500001	chr2L_10500001	0.20	RAL-563
43	chr2L	10701044	10701138	opus	470	336	5	94	'3-2	68.43	2.7	1.4	intron	Lip1 -	chr2L_5_10700001	chr2L_10700001	0.60	RAL-563
44	chr2L	10780247	10780294	412	7082	488	5	47	'1-4	58.67	2.8	1.3	intron	CG31869 -	chr2L_5_10780001	chr2L_10780001	0.20	RAL-563
45	chr2L	11712271	11712318	hobo	2934	26	6	47	'4-2	57.81	5.1	1.0	intergenic	not near genes	chr2L_6_11710001	chr2L_11710001	0.67	RAL-563
46	chr2L	11909563	11909605	hobo	21	2925	8	42	'3-5	69.41	3.5	1.8	intron	Pde1c -	chr2L_8_11905001	chr2L_11905001	0.38	RAL-563
47	chr2L	12902891	12902950	opus	7498	7022	5	59	'3-2	64.65	3.3	1.2	intergenic	not near genes	chr2L_5_12900001	chr2L_12900001	0.60	RAL-563
48	chr2L	13038680	13038742	hobo	9	2933	5	62	'3-2	64.45	2.3	1.5	intron	CG9932 -	chr2L_5_13035001	chr2L_13035001	0.60	RAL-563
49	chr2L	13155921	13155976	invader4	325	2785	4	55	'2-2	73.30	1.3	1.7	intergenic	not near genes	chr2L_4_13155001	chr2L_13155001	0.50	RAL-563
50	chr2L	13478520	13478602	mdg3	5497	5249	12	82	'7-5	68.98	3.4	2.7	intron	CG42784 +	chr2L_12_13475001	chr2L_13475001	0.58	RAL-563
51	chr2L	13602839	13602899	Tirant	400	8122	13	60	'7-6	67.38	4.5	2.4	intron	kuz +	chr2L_13_13600001	chr2L_13600001	0.54	RAL-563
52	chr2L	13673981	13674038	1360	15	3382	4	57	'2-2	67.67	1.3	1.7	intergenic	not near genes	chr2L_4_13670001	chr2L_13670001	0.50	RAL-563
53	chr2L	13738747	13738818	opus	490	3	8	71	'7-1	65.55	4.1	1.6	intergenic	not near genes	chr2L_8_13735001	chr2L_13735001	0.88	RAL-563
54	chr2L	13891093	13891170	412	49	495	8	77	'6-2	60.77	9.2	0.8	intron	CenG1A +	chr2L_8_13890001	chr2L_13890001	0.75	RAL-563
55	chr2L	14517892	14517965	Max-element	8240	8535	5	73	'3-2	58.64	4.1	1.0	intergenic	not near genes	chr2L_5_14515001	chr2L_14515001	0.60	RAL-563
56	chr2L	14798910	14799032	blood	198	2	6	122	'1-5	68.05	5.0	1.0	intergenic	not near genes	chr2L_6_14795001	chr2L_14795001	0.17	RAL-563
57	chr2L	15360637	15360703	mdg1	414	7046	6	66	'4-2	57.37	5.9	0.9	intergenic	CG15258 -	chr2L_6_15360001	chr2L_15360001	0.67	RAL-563
58	chr2L	15609248	15609273	jockey	4898	4923	4	25	'3-1	63.53	8.1	0.4	intergenic	not near genes	chr2L_4_15605001	chr2L_15605001	0.75	RAL-563
59	chr2L	15626373	15626398	hobo	9	32	9	25	'3-6	65.13	6.9	1.1	intergenic	not near genes	chr2L_9_15625001	chr2L_15625001	0.33	RAL-563
60	chr2L	15963439	15963515	297	1	389	5	76	'3-2	68.53	5.0	0.8	intergenic	not near genes	chr2L_5_15960001	chr2L_15960001	0.60	RAL-563
61	chr2L	16067116	16067135	HMS-Beagle2	33	6897	6	19	'3-3	67.43	6.1	0.8	intron	beat-Ia +	chr2L_6_16065001	chr2L_16065001	0.50	RAL-563
62	chr2L	16236916	16236979	roo	2	394	6	63	'2-4	64.16	5.4	0.9	exon	CG42817 +	chr2L_6_16235001	chr2L_16235001	0.33	RAL-563
63	chr2L	16530588	16530648	pogo	2095	17	4	60	'2-2	72.03	2.5	1.1	intron	CG5953 -	chr2L_4_16530001	chr2L_16530001	0.50	RAL-563
64	chr2L	16928156	16928235	mdg3	5497	5251	10	79	'3-7	63.78	1.9	3.4	intergenic	not near genes	chr2L_10_16925001	chr2L_16925001	0.30	RAL-563
65	chr2L	17053417	17053438	Stalker2	405	7632	4	21	'1-3	59.67	4.4	0.7	intergenic	not near genes	chr2L_4_17050001	chr2L_17050001	0.25	RAL-563
66	chr2L	17285490	17285510	HMS-Beagle	6823	6799	4	20	'2-2	67.89	2.4	1.2	intergenic	not near genes	chr2L_4_17285001	chr2L_17285001	0.50	RAL-563
67	chr2L	17430979	17431030	Burdock	6386	6155	4	51	'3-1	68.29	6.9	0.5	intron	Dif -	chr2L_4_17430001	chr2L_17430001	0.75	RAL-563
68	chr2L	17557176	17557192	blood	18	2	4	16	'3-1	63.33	2.7	1.1	intergenic	not near genes	chr2L_4_17555001	chr2L_17555001	0.75	RAL-563
69	chr2L	18176499	18176566	Burdock	6142	6382	6	67	'5-1	63.33	4.3	1.1	intron	CG42750 -	chr2L_6_18175001	chr2L_18175001	0.83	RAL-563
70	chr2L	18769366	18769434	412	5	7538	10	68	'7-3	61.83	7.6	1.2	intron	ham -	chr2L_10_18765001	chr2L_18765001	0.70	RAL-563
71	chr2L	18823539	18823579	P-element	2860	7	8	40	'1-7	58.61	11.2	0.7	intergenic	CG17323 +	chr2L_8_18820001	chr2L_18820001	0.12	RAL-563
72	chr2L	19025926	19025975	roo	6	9045	4	49	'1-3	74.12	4.6	0.7	intergenic	not near genes	chr2L_4_19025001	chr2L_19025001	0.25	RAL-563
73	chr2L	19307346	19307404	mdg1	407	7047	4	58	'3-1	58.33	8.5	0.4	intergenic	not near genes	chr2L_4_19305001	chr2L_19305001	0.75	RAL-563
74	chr2L	19483590	19483670	gtwin	473	6916	7	80	'5-2	64.73	4.4	1.3	exon	CG10195 -	chr2L_7_19480001	chr2L_19480001	0.71	RAL-563
75	chr2L	19794007	19794040	Doc	2	35	6	33	'3-3	65.66	1.3	2.6	intron	fs(2)ltoPP43 -	chr2L_6_19790001	chr2L_19790001	0.50	RAL-563
76	chr2L	20085075	20085128	P-element	2885	22	8	53	'5-3	46.97	8.9	0.8	intron	neb +	chr2L_8_20085001	chr2L_20085001	0.62	RAL-563
77	chr2L	20169369	20169416	invader3	5208	5438	4	47	'3-1	65.20	0.0	4.0	intergenic	not near genes	chr2L_4_20165001	chr2L_20165001	0.75	RAL-563
78	chr2L	20213605	20213629	transib2	2816	2791	5	24	'4-1	61.33	8.0	0.6	intergenic	not near genes	chr2L_5_20210001	chr2L_20210001	0.80	RAL-563
79	chr2L	20385282	20385363	Transpac	4918	310	5	81	'2-3	68.60	6.8	0.6	intergenic	CG10947 -	chr2L_5_20385001	chr2L_20385001	0.40	RAL-563
80	chr2L	20521722	20521752	Doc	7	37	9	30	'7-2	66.49	4.0	1.8	intergenic	not near genes	chr2L_9_20520001	chr2L_20520001	0.78	RAL-563
81	chr2L	20529485	20529541	412	7535	14	4	56	'2-2	65.91	1.9	1.4	intergenic	not near genes	chr2L_4_20525001	chr2L_20525001	0.50	RAL-563
82	chr2L	20791542	20791803	blood	52	7386	4	261	'1-3	63.42	5.0	0.7	exon	vari -	chr2L_4_20790001	chr2L_20790001	0.25	RAL-563
83	chr2L	20817614	20817676	flea	5013	34	4	62	'2-2	56.64	1.1	1.9	intergenic	CheB38a -,CheB38b -	chr2L_4_20815001	chr2L_20815001	0.50	RAL-563
84	chr2L	20986841	20986872	Transpac	5213	310	7	31	'2-5	67.91	5.0	1.2	intron	CG42238 -	chr2L_7_20985001	chr2L_20985001	0.29	RAL-563
85	chr2L	21581219	21581270	pogo	8	2076	5	51	'2-3	70.10	1.0	2.5	intron	nompB -	chr2L_5_21580001	chr2L_21580001	0.40	RAL-563
86	chr2L	21685384	21685445	1360	3380	4	6	61	'2-4	62.23	3.9	1.2	intron	CG31619 +	chr2L_6_21685001	chr2L_21685001	0.33	RAL-563
87	chr2L	23068248	23068319	blood	7009	7201	4	71	'2-2	66.08	3.0	1.0	exon	Spf45 -	chr2L_4_23065001	chr2L_23065001	0.50	RAL-563
88	chr2L	23068853	23068929	1360	2	1	29	76	'12-17	66.16	1.7	10.7	intergenic	CR43242 +,Spf45 -	chr2L_29_23065001	chr2L_23065001	0.41	RAL-563
89	chr2L	23299983	23300000	invader4	324	340	7	17	'4-3	61.01	3.4	1.6	intergenic	not near genes	chr2L_7_23295001	chr2L_23295001	0.57	RAL-563
90	chr2R	2949048	2949093	17.6	7408	6952	4	45	'3-1	67.88	2.6	1.1	intron	Scp1 -	chr2R_4_2945001	chr2R_2945001	0.75	RAL-563
91	chr2R	3919534	3919677	1360	3269	19	4	143	'1-3	62.00	2.5	1.1	intron	uex -	chr2R_4_3915001	chr2R_3915001	0.25	RAL-563
92	chr2R	5110515	5110590	1360	3	1	8	75	'4-4	69.10	2.6	2.2	intergenic	not near genes	chr2R_8_5110001	chr2R_5110001	0.50	RAL-563
93	chr2R	5301724	5301795	1360	5	3	11	71	'8-3	61.51	1.9	3.8	intergenic	not near genes	chr2R_11_5300001	chr2R_5300001	0.73	RAL-563
94	chr2R	5531165	5531180	1360	66	55	7	15	'4-3	58.79	2.4	2.1	intron	CG30438 +	chr2R_7_5530001	chr2R_5530001	0.57	RAL-563
95	chr2R	5582004	5582075	roo	409	10	4	71	'2-2	67.86	3.2	1.0	intergenic	not near genes	chr2R_4_5580001	chr2R_5580001	0.50	RAL-563
96	chr2R	5848474	5848556	Tirant	4	401	10	82	'3-7	67.91	2.0	3.3	intron	dpr12 +	chr2R_10_5845001	chr2R_5845001	0.30	RAL-563
97	chr2R	5890530	5890570	X-element	39	36	8	40	'4-4	64.04	5.7	1.2	intergenic	not near genes	chr2R_8_5890001	chr2R_5890001	0.50	RAL-563
98	chr2R	5955369	5955436	mdg1	421	7052	9	67	'7-2	64.08	6.0	1.3	intergenic	not near genes	chr2R_9_5955001	chr2R_5955001	0.78	RAL-563
99	chr2R	6680219	6680287	roo	8674	406	13	68	'3-10	63.00	6.4	1.8	intron,5` UTR	CG9422 +,Tdc1 -	chr2R_13_6680001	chr2R_6680001	0.23	RAL-563
100	chr2R	6777585	6777660	roo	409	8670	11	75	'7-4	63.72	3.8	2.3	intron	Epac -	chr2R_11_6775001	chr2R_6775001	0.64	RAL-563
101	chr2R	6823587	6823652	mdg1	15	7459	4	65	'1-3	65.22	4.3	0.8	intergenic	not near genes	chr2R_4_6820001	chr2R_6820001	0.25	RAL-563
102	chr2R	6921138	6921162	Doc	29	5	7	24	'1-6	61.26	5.7	1.0	3` UTR	CG30158 +	chr2R_7_6920001	chr2R_6920001	0.14	RAL-563
103	chr2R	7022462	7022525	invader4	2	306	4	63	'3-1	70.77	0.5	2.7	intergenic	not near genes	chr2R_4_7020001	chr2R_7020001	0.75	RAL-563
104	chr2R	7352493	7352548	hopper	1413	20	7	55	'2-5	67.09	6.7	0.9	intron	Dscam1 -	chr2R_7_7350001	chr2R_7350001	0.29	RAL-563
105	chr2R	7533078	7533109	pogo	4	35	7	31	'5-2	69.03	6.1	1.0	intergenic	Drat -,CR44209 -,Cyt-b5 +	chr2R_7_7530001	chr2R_7530001	0.71	RAL-563
106	chr2R	7638434	7638493	mdg3	20	245	9	59	'3-6	70.48	2.9	2.3	intron	CG43340 +	chr2R_9_7635001	chr2R_7635001	0.33	RAL-563
107	chr2R	7756932	7756985	412	3	7531	8	53	'3-5	59.87	8.7	0.8	intron,intron	CG30497 -,CG45093 -	chr2R_8_7755001	chr2R_7755001	0.38	RAL-563
108	chr2R	8158310	8158424	blood	7010	244	8	114	'4-4	68.43	3.8	1.7	intergenic	CR44068 +	chr2R_8_8155001	chr2R_8155001	0.50	RAL-563
109	chr2R	8527824	8527907	R1A1-element	4891	5335	5	83	'3-2	63.37	5.7	0.7	intron	mtt -	chr2R_5_8525001	chr2R_8525001	0.60	RAL-563
110	chr2R	9138700	9138755	pogo	12	2084	6	55	'4-2	70.79	5.6	0.9	intron,intron	CG44286 +,CG8788 +	chr2R_6_9135001	chr2R_9135001	0.67	RAL-563
111	chr2R	9227821	9227889	1360	3	3387	6	68	'2-4	71.43	4.1	1.2	3` UTR	hig -	chr2R_6_9225001	chr2R_9225001	0.33	RAL-563
112	chr2R	9315147	9315201	roo	8670	9053	5	54	'3-2	62.21	7.2	0.6	intron,intron	CG13739 -,CG13954 -	chr2R_5_9315001	chr2R_9315001	0.60	RAL-563
113	chr2R	9408196	9408235	FB	22	12	4	39	'2-2	63.74	6.3	0.5	intron	wun -	chr2R_4_9405001	chr2R_9405001	0.50	RAL-563
114	chr2R	9440630	9440674	pogo	16	2091	5	44	'1-4	72.74	5.4	0.8	intron	ced-6 -	chr2R_5_9440001	chr2R_9440001	0.20	RAL-563
115	chr2R	9695190	9695250	Tirant	11	8493	10	60	'6-4	58.56	6.0	1.4	intergenic	not near genes	chr2R_10_9695001	chr2R_9695001	0.60	RAL-563
116	chr2R	9788318	9788343	jockey	17	6	5	25	'1-4	66.00	5.0	0.8	intron	CG1688 -	chr2R_5_9785001	chr2R_9785001	0.20	RAL-563
117	chr2R	9870682	9871033	roo	9039	409	6	351	'3-3	66.22	1.6	2.3	intron	cbx -	chr2R_6_9870001	chr2R_9870001	0.50	RAL-563
118	chr2R	9948277	9948317	jockey	4986	4679	8	40	'2-6	58.13	6.9	1.0	intron	Mef2 -	chr2R_8_9945001	chr2R_9945001	0.25	RAL-563
119	chr2R	10202664	10202728	Burdock	6378	6140	8	64	'3-5	64.08	5.9	1.2	intergenic	not near genes	chr2R_8_10200001	chr2R_10200001	0.38	RAL-563
120	chr2R	10317748	10317818	roo	409	8676	10	70	'8-2	71.57	4.2	1.9	intron	Ndg +	chr2R_10_10315001	chr2R_10315001	0.80	RAL-563
121	chr2R	10384966	10385040	roo	406	4	6	74	'3-3	67.20	3.6	1.3	intron	CG42732 -	chr2R_6_10380001	chr2R_10380001	0.50	RAL-563
122	chr2R	10976905	10976924	Doc	24	5	10	19	'3-7	50.59	5.4	1.6	intergenic	not near genes	chr2R_10_10975001	chr2R_10975001	0.30	RAL-563
123	chr2R	11080274	11080294	412	7517	484	4	20	'2-2	62.85	8.7	0.4	intron	luna -	chr2R_4_11080001	chr2R_11080001	0.50	RAL-563
124	chr2R	11418863	11418915	1360	2	3371	5	52	'3-2	69.99	9.6	0.5	intron	Drip -	chr2R_5_11415001	chr2R_11415001	0.60	RAL-563
125	chr2R	11575036	11575171	INE-1	144	136	4	135	'1-3	58.84	0.8	2.2	intergenic	not near genes	chr2R_4_11575001	chr2R_11575001	0.25	RAL-563
126	chr2R	11661099	11661203	1360	3375	173	14	104	'8-6	64.71	3.4	3.2	intron	Roc2 -	chr2R_14_11660001	chr2R_11660001	0.57	RAL-563
127	chr2R	11681949	11682005	roo	402	8683	5	56	'1-4	66.51	3.4	1.1	intron	Buffy +	chr2R_5_11680001	chr2R_11680001	0.20	RAL-563
128	chr2R	11797366	11797420	1360	5	17	8	54	'7-1	63.39	8.6	0.8	intron	ths +	chr2R_8_11795001	chr2R_11795001	0.88	RAL-563
129	chr2R	11959718	11959796	roo	409	2	9	78	'4-5	68.61	3.4	2.0	intron	CG13188 +	chr2R_9_11955001	chr2R_11955001	0.44	RAL-563
130	chr2R	12068417	12068477	pogo	4	2081	6	60	'4-2	71.12	2.9	1.5	intron	CG8888 -	chr2R_6_12065001	chr2R_12065001	0.67	RAL-563
131	chr2R	12185330	12185377	accord	7380	31	8	47	'5-3	68.52	5.6	1.2	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_8_12185001	chr2R_12185001	0.62	RAL-563
132	chr2R	12442669	12442722	pogo	2082	4	5	53	'2-3	70.94	5.3	0.8	intron	Dyb +	chr2R_5_12440001	chr2R_12440001	0.40	RAL-563
133	chr2R	12479062	12479105	FB	13	21	4	43	'1-3	72.14	1.1	1.9	intron	Dh44-R2 +	chr2R_4_12475001	chr2R_12475001	0.25	RAL-563
134	chr2R	12707297	12707316	roo	396	9040	4	19	'3-1	65.66	5.4	0.6	intron	CG42663 +	chr2R_4_12705001	chr2R_12705001	0.75	RAL-563
135	chr2R	12807502	12807714	hobo	6	2910	8	212	'7-1	65.64	3.5	1.8	3` UTR	CG17580 +	chr2R_8_12805001	chr2R_12805001	0.88	RAL-563
136	chr2R	12834812	12834870	roo	395	8673	4	58	'1-3	65.55	4.1	0.8	intergenic	not near genes	chr2R_4_12830001	chr2R_12830001	0.25	RAL-563
137	chr2R	12904399	12904457	Tirant	24	400	7	58	'2-5	67.92	7.6	0.8	intergenic	not near genes	chr2R_7_12900001	chr2R_12900001	0.29	RAL-563
138	chr2R	13462447	13462482	roo	9039	411	6	35	'2-4	72.45	2.1	1.9	intron	arr -	chr2R_6_13460001	chr2R_13460001	0.33	RAL-563
139	chr2R	13665046	13665098	roo	9054	10	6	52	'3-3	65.07	3.8	1.2	intron	fas +	chr2R_6_13665001	chr2R_13665001	0.50	RAL-563
140	chr2R	13759000	13759040	297	6928	14	4	40	'3-1	71.47	3.6	0.9	intergenic	CG6280 +	chr2R_4_13755001	chr2R_13755001	0.75	RAL-563
141	chr2R	14332131	14332216	jockey	18	179	5	85	'4-1	58.36	2.6	1.4	intron	Shroom +	chr2R_5_14330001	chr2R_14330001	0.80	RAL-563
142	chr2R	14654941	14654998	Stalker2	390	7259	8	57	'4-4	61.34	2.6	2.2	intergenic	not near genes	chr2R_8_14650001	chr2R_14650001	0.50	RAL-563
143	chr2R	14848985	14849008	flea	4717	4697	9	23	'4-5	63.35	9.5	0.9	exon	SMC2 -	chr2R_9_14845001	chr2R_14845001	0.44	RAL-563
144	chr2R	14958653	14958683	jockey	4576	4606	6	30	'1-5	63.03	2.3	1.8	intron	aPKC -	chr2R_6_14955001	chr2R_14955001	0.17	RAL-563
145	chr2R	16127774	16127830	1360	5	3380	4	56	'2-2	57.52	4.4	0.7	intron	spin +	chr2R_4_16125001	chr2R_16125001	0.50	RAL-563
146	chr2R	16159206	16159267	pogo	4	2082	5	61	'2-3	69.24	6.4	0.7	intron	lbk +	chr2R_5_16155001	chr2R_16155001	0.40	RAL-563
147	chr2R	16386495	16386699	P-element	14	2814	11	204	'10-1	45.95	5.1	1.8	intergenic	Sema-2b +	chr2R_11_16385001	chr2R_16385001	0.91	RAL-563
148	chr2R	16791355	16791509	HMS-Beagle	7028	6952	4	154	'3-1	67.61	5.3	0.6	3` UTR	CG5522 +	chr2R_4_16790001	chr2R_16790001	0.75	RAL-563
149	chr2R	16833372	16833426	hobo	10	2933	4	54	'2-2	64.51	4.1	0.8	5` UTR	CR43650 +	chr2R_4_16830001	chr2R_16830001	0.50	RAL-563
150	chr2R	16979843	16979919	roo	409	8669	7	76	'3-4	69.14	1.2	3.2	intron	Cbp53E +	chr2R_7_16975001	chr2R_16975001	0.43	RAL-563
151	chr2R	17153489	17153541	I-element	5345	4897	5	52	'2-3	59.53	6.0	0.7	intergenic	not near genes	chr2R_5_17150001	chr2R_17150001	0.40	RAL-563
152	chr2R	17354702	17354728	mdg3	5465	242	5	26	'4-1	62.77	0.9	2.6	intron	mbl +	chr2R_5_17350001	chr2R_17350001	0.80	RAL-563
153	chr2R	17458657	17458714	P-element	2878	8	8	57	'6-2	45.31	7.3	1.0	intron	CG14478 +	chr2R_8_17455001	chr2R_17455001	0.75	RAL-563
154	chr2R	17850097	17850158	Tirant	399	8127	5	61	'1-4	67.04	2.7	1.4	intron	olf186-F +	chr2R_5_17850001	chr2R_17850001	0.20	RAL-563
155	chr2R	18209040	18209188	Doc	26	111	7	148	'6-1	56.63	4.8	1.2	intergenic	CG30114 +,CR45147 +	chr2R_7_18205001	chr2R_18205001	0.86	RAL-563
156	chr2R	18219291	18219311	297	6601	6581	5	20	'2-3	69.07	4.2	1.0	intergenic	not near genes	chr2R_5_18215001	chr2R_18215001	0.40	RAL-563
157	chr2R	18350139	18350206	roo	406	8668	6	67	'2-4	63.75	3.3	1.4	intron	sbb -	chr2R_6_18350001	chr2R_18350001	0.33	RAL-563
158	chr2R	18356111	18356336	P-element	6	2817	5	225	'4-1	55.88	6.4	0.7	intron	sbb -	chr2R_5_18355001	chr2R_18355001	0.80	RAL-563
159	chr2R	18439109	18439163	412	18	7537	4	54	'2-2	63.19	6.0	0.6	intron	CG30118 -	chr2R_4_18435001	chr2R_18435001	0.50	RAL-563
160	chr2R	18690377	18690429	Transpac	5227	28	5	52	'4-1	68.53	3.6	1.1	intron	Sik3 +	chr2R_5_18690001	chr2R_18690001	0.80	RAL-563
161	chr2R	18725446	18725501	flea	4761	5007	5	55	'4-1	60.58	3.8	1.0	intron	Hs3st-A +	chr2R_5_18725001	chr2R_18725001	0.80	RAL-563
162	chr2R	19471877	19471948	1360	3387	6	7	71	'5-2	65.69	3.0	1.8	intron	par-1 +	chr2R_7_19470001	chr2R_19470001	0.71	RAL-563
163	chr2R	19535099	19535172	roo	403	8664	5	73	'2-3	62.41	3.6	1.1	intron	sm -	chr2R_5_19535001	chr2R_19535001	0.40	RAL-563
164	chr2R	19797544	19797642	HMS-Beagle	7014	16	10	98	'8-2	68.90	4.6	1.8	intergenic	not near genes	chr2R_10_19795001	chr2R_19795001	0.80	RAL-563
165	chr2R	19925410	19925482	Burdock	6139	254	5	72	'1-4	64.65	3.9	1.0	intergenic	CR44626 -	chr2R_5_19925001	chr2R_19925001	0.20	RAL-563
166	chr2R	20107912	20107976	I-element	5346	2	8	64	'5-3	64.25	3.3	1.9	intergenic	not near genes	chr2R_8_20105001	chr2R_20105001	0.62	RAL-563
167	chr2R	20204040	20204107	roo	409	8677	5	67	'3-2	60.59	6.2	0.7	intergenic	not near genes	chr2R_5_20200001	chr2R_20200001	0.60	RAL-563
168	chr2R	20499804	20499880	roo	409	8669	16	76	'7-9	67.58	4.1	3.1	intergenic	not near genes	chr2R_16_20495001	chr2R_20495001	0.44	RAL-563
169	chr2R	20618508	20618577	412	6	487	5	69	'1-4	58.42	2.1	1.6	5` UTR	CG9945 +	chr2R_5_20615001	chr2R_20615001	0.20	RAL-563
170	chr2R	20767075	20767100	copia	29	4873	4	25	'2-2	70.67	2.2	1.2	5` UTR	CR44665 +	chr2R_4_20765001	chr2R_20765001	0.50	RAL-563
171	chr2R	21202610	21202628	1360	3388	3370	6	18	'5-1	62.67	15.4	0.4	intron,intron	CG44245 +,Glycogenin +	chr2R_6_21200001	chr2R_21200001	0.83	RAL-563
172	chr2R	21257443	21257511	mdg1	421	7051	9	68	'8-1	64.91	3.0	2.2	intron	Rgk3 +	chr2R_9_21255001	chr2R_21255001	0.89	RAL-563
173	chr2R	21414760	21414817	copia	234	4871	5	57	'1-4	67.12	3.4	1.1	intron	Sdc -	chr2R_5_21410001	chr2R_21410001	0.20	RAL-563
174	chr2R	21713261	21713479	P-element	2881	44	4	218	'3-1	47.00	4.4	0.7	intron	HmgD +	chr2R_4_21710001	chr2R_21710001	0.75	RAL-563
175	chr2R	21755933	21755958	3S18	4	5794	5	25	'2-3	60.30	5.0	0.8	intergenic	not near genes	chr2R_5_21755001	chr2R_21755001	0.40	RAL-563
176	chr2R	21940486	21940556	roo	2	404	8	70	'5-3	62.50	2.4	2.4	intron	Fili +	chr2R_8_21940001	chr2R_21940001	0.62	RAL-563
177	chr2R	22287426	22287441	jockey	12	27	4	15	'3-1	61.53	7.5	0.5	intergenic	not near genes	chr2R_4_22285001	chr2R_22285001	0.75	RAL-563
178	chr2R	22451324	22451510	mdg1	306	23	5	186	'1-4	60.85	2.9	1.3	intergenic	not near genes	chr2R_5_22450001	chr2R_22450001	0.20	RAL-563
179	chr2R	22734231	22734286	diver	9	208	5	55	'4-1	57.92	3.8	1.0	intron	jbug -	chr2R_5_22730001	chr2R_22730001	0.80	RAL-563
180	chr2R	22774974	22774994	jockey	12	32	5	20	'2-3	61.27	4.9	0.8	intron	CG42260 -	chr2R_5_22770001	chr2R_22770001	0.40	RAL-563
181	chr2R	22785045	22785122	roo	9069	8664	10	77	'4-6	63.73	3.1	2.4	intron	CG42260 -	chr2R_10_22785001	chr2R_22785001	0.40	RAL-563
182	chr2R	22875273	22875298	jockey	4763	4788	4	25	'2-2	62.33	6.2	0.6	intron	PIP5K59B +	chr2R_4_22875001	chr2R_22875001	0.50	RAL-563
183	chr2R	23104695	23104726	Rt1b	5111	5141	7	31	'5-2	65.91	5.3	1.1	exon	Gr59d -	chr2R_7_23100001	chr2R_23100001	0.71	RAL-563
184	chr2R	23111516	23111550	jockey	4968	14	4	34	'2-2	66.12	5.0	0.7	intergenic	CR44781 -	chr2R_4_23110001	chr2R_23110001	0.50	RAL-563
185	chr2R	23890286	23890336	1360	13	3375	12	50	'8-4	67.63	4.9	2.0	intergenic	Dcp1 -,DNA-ligI +	chr2R_12_23890001	chr2R_23890001	0.67	RAL-563
186	chr2R	24021572	24021627	pogo	8	2081	4	55	'1-3	71.13	5.6	0.6	intron	CG3907 -	chr2R_4_24020001	chr2R_24020001	0.25	RAL-563
187	chr2R	24125584	24125746	Stalker2	377	7265	7	162	'1-6	65.04	6.4	0.9	intron,intron,intron	CG43775 -,CG43776 -,CG43777 -	chr2R_7_24125001	chr2R_24125001	0.14	RAL-563
188	chr2R	24441760	24441779	roo	9065	9046	4	19	'3-1	62.33	5.0	0.7	intergenic	not near genes	chr2R_4_24440001	chr2R_24440001	0.75	RAL-563
189	chr2R	24538065	24538128	mdg1	7459	18	5	63	'2-3	66.86	4.4	0.9	intron,intron	CG4622 -,ITP +	chr2R_5_24535001	chr2R_24535001	0.40	RAL-563
190	chr2R	24630943	24631105	297	6583	177	6	162	'3-3	67.22	4.2	1.2	intron,3` UTR	CG13594 -,CR43787 -	chr2R_6_24630001	chr2R_24630001	0.50	RAL-563
191	chr2R	24964402	24964474	P-element	1	5	7	72	'3-4	54.66	4.3	1.3	intron	CG2765 -	chr2R_7_24960001	chr2R_24960001	0.43	RAL-563
192	chr3L	27605	27621	INE-1	577	561	6	16	'3-3	56.22	0.0	6.0	intergenic	not near genes	chr3L_6_25001	chr3L_25001	0.50	RAL-563
193	chr3L	46925	47019	FB	6	131	4	94	'3-1	66.67	1.3	1.7	intergenic	not near genes	chr3L_4_45001	chr3L_45001	0.75	RAL-563
194	chr3L	711332	711388	P-element	1	2867	4	56	'3-1	51.22	7.2	0.5	exon	CG13896 -	chr3L_4_710001	chr3L_710001	0.75	RAL-563
195	chr3L	1055699	1055841	copia	236	4973	5	142	'4-1	62.30	2.6	1.4	intron	bab1 -	chr3L_5_1055001	chr3L_1055001	0.80	RAL-563
196	chr3L	1684489	1684561	Tirant	8501	3	20	72	'12-8	62.23	3.6	4.3	intron	CG7991 +	chr3L_20_1680001	chr3L_1680001	0.60	RAL-563
197	chr3L	2351202	2351272	mdg1	7044	7044	6	70	'2-4	68.67	0.6	3.8	intergenic	not near genes	chr3L_6_2350001	chr3L_2350001	0.33	RAL-563
198	chr3L	2758250	2758314	412	3	7533	6	64	'5-1	63.41	5.9	0.9	intron	Mrtf -	chr3L_6_2755001	chr3L_2755001	0.83	RAL-563
199	chr3L	3020040	3020101	blood	7009	7367	16	61	'7-9	70.24	5.5	2.5	intergenic	not near genes	chr3L_16_3020001	chr3L_3020001	0.44	RAL-563
200	chr3L	3022375	3022396	hopper	1402	1379	8	21	'5-3	69.23	0.7	4.7	intergenic	not near genes	chr3L_8_3020001	chr3L_3020001	0.62	RAL-563
201	chr3L	3102421	3102480	roo	8687	410	23	59	'13-10	68.83	5.3	3.7	intron	Cht7 -	chr3L_23_3100001	chr3L_3100001	0.57	RAL-563
202	chr3L	3249185	3249355	P-element	2886	2840	16	170	'15-1	52.52	5.6	2.4	intergenic	CG43389 +,CR43626 +	chr3L_16_3245001	chr3L_3245001	0.94	RAL-563
203	chr3L	3311331	3311404	1360	4	3387	15	73	'6-9	60.98	4.4	2.8	intron	ZnT63C +	chr3L_15_3310001	chr3L_3310001	0.40	RAL-563
204	chr3L	3487887	3487903	jockey	4679	4665	5	16	'3-2	66.06	3.1	1.2	intron	CG42324 +	chr3L_5_3485001	chr3L_3485001	0.60	RAL-563
205	chr3L	3748398	3748482	Tirant	2	401	14	84	'9-5	65.44	1.7	5.2	intron	CG32264 -	chr3L_14_3745001	chr3L_3745001	0.64	RAL-563
206	chr3L	3753212	3753282	412	4	487	10	70	'6-4	61.55	1.3	4.3	intron	CG32264 -	chr3L_10_3750001	chr3L_3750001	0.60	RAL-563
207	chr3L	4422924	4422964	I-element	22	5343	8	40	'5-3	61.37	1.2	3.6	intron	CG15020 +	chr3L_8_4420001	chr3L_4420001	0.62	RAL-563
208	chr3L	4529855	4529917	opus	8	7489	20	62	'5-15	70.05	4.9	3.4	intron	Tie -	chr3L_20_4525001	chr3L_4525001	0.25	RAL-563
209	chr3L	4530382	4530424	opus	7487	7	14	42	'11-3	72.84	1.6	5.4	intron	Tie -	chr3L_14_4530001	chr3L_4530001	0.79	RAL-563
210	chr3L	5180984	5181031	FB	17	5	8	47	'2-6	64.46	1.7	3.0	intron	shep -	chr3L_8_5180001	chr3L_5180001	0.25	RAL-563
211	chr3L	6519366	6519385	F-element	4450	4431	5	19	'3-2	61.93	1.8	1.8	intron	sfl +	chr3L_5_6515001	chr3L_6515001	0.60	RAL-563
212	chr3L	6937636	6937691	blood	7366	3	9	55	'3-6	61.22	1.5	3.6	intergenic	CR45414 +	chr3L_9_6935001	chr3L_6935001	0.33	RAL-563
213	chr3L	7232583	7232655	pogo	8	2097	10	72	'5-5	65.10	3.8	2.1	intergenic	not near genes	chr3L_10_7230001	chr3L_7230001	0.50	RAL-563
214	chr3L	7317148	7317219	hobo	2	2934	16	71	'6-10	62.93	3.5	3.6	intergenic	not near genes	chr3L_16_7315001	chr3L_7315001	0.38	RAL-563
215	chr3L	7962929	7962987	412	471	1	8	58	'2-6	71.83	1.9	2.8	intergenic	not near genes	chr3L_8_7960001	chr3L_7960001	0.25	RAL-563
216	chr3L	8179050	8179117	S-element	1703	1714	7	67	'3-4	63.12	5.0	1.2	exon	mthl7 -	chr3L_7_8175001	chr3L_8175001	0.43	RAL-563
217	chr3L	8693112	8693180	opus	497	13	9	68	'6-3	65.04	4.6	1.6	5` UTR	CR44526 +	chr3L_9_8690001	chr3L_8690001	0.67	RAL-563
218	chr3L	9324762	9324789	hopper	1385	1411	6	27	'4-2	64.75	3.3	1.4	intergenic	not near genes	chr3L_6_9320001	chr3L_9320001	0.67	RAL-563
219	chr3L	10056026	10056084	roo	175	21	9	58	'4-5	68.95	2.8	2.4	intron	dpr6 +	chr3L_9_10055001	chr3L_10055001	0.44	RAL-563
220	chr3L	10130502	10130578	Max-element	301	5	13	76	'9-4	59.88	1.8	4.6	intron	dpr6 +	chr3L_13_10130001	chr3L_10130001	0.69	RAL-563
221	chr3L	10489754	10489824	Stalker2	7651	8	10	70	'3-7	58.75	1.9	3.4	intron	A2bp1 +	chr3L_10_10485001	chr3L_10485001	0.30	RAL-563
222	chr3L	10612303	10612367	blood	7143	27	13	64	'6-7	60.20	4.5	2.4	intergenic	not near genes	chr3L_13_10610001	chr3L_10610001	0.46	RAL-563
223	chr3L	10823157	10823214	hobo	6	2934	10	57	'6-4	52.10	6.6	1.3	intergenic	not near genes	chr3L_10_10820001	chr3L_10820001	0.60	RAL-563
224	chr3L	10891016	10891079	1360	6	10	13	63	'8-5	65.22	2.3	3.9	intergenic	Cpr67Fa1 +	chr3L_13_10890001	chr3L_10890001	0.62	RAL-563
225	chr3L	11119678	11119746	P-element	2883	2883	15	68	'5-10	45.27	7.9	1.7	intron	fd68A -	chr3L_15_11115001	chr3L_11115001	0.33	RAL-563
226	chr3L	11593880	11593931	pogo	2095	27	7	51	'6-1	69.83	0.8	3.9	intergenic	CR45443 -,CR45671 -	chr3L_7_11590001	chr3L_11590001	0.86	RAL-563
227	chr3L	12087054	12087198	Burdock	239	87	6	144	'5-1	68.72	1.3	2.6	intergenic	not near genes	chr3L_6_12085001	chr3L_12085001	0.83	RAL-563
228	chr3L	12834322	12834401	Tirant	401	8107	10	79	'6-4	70.24	3.8	2.1	intron	CG10960 -	chr3L_10_12830001	chr3L_12830001	0.60	RAL-563
229	chr3L	12863699	12863769	Transpac	11	310	13	70	'7-6	69.51	5.5	2.0	intergenic	not near genes	chr3L_13_12860001	chr3L_12860001	0.54	RAL-563
230	chr3L	12974649	12974674	I-element	5325	5350	5	25	'2-3	65.33	1.9	1.7	intergenic	not near genes	chr3L_5_12970001	chr3L_12970001	0.40	RAL-563
231	chr3L	13602032	13602063	I-element	14	5332	6	31	'4-2	66.91	0.8	3.3	intron	bru-3 -	chr3L_6_13600001	chr3L_13600001	0.67	RAL-563
232	chr3L	13688098	13688321	jockey	30	4973	8	223	'7-1	65.51	3.5	1.8	intron	bru-3 -	chr3L_8_13685001	chr3L_13685001	0.88	RAL-563
233	chr3L	13688732	13688758	Stalker	6850	27	8	26	'2-6	65.17	4.3	1.5	intron	bru-3 -	chr3L_8_13685001	chr3L_13685001	0.25	RAL-563
234	chr3L	13688746	13688809	Stalker4	14	406	10	63	'3-7	65.67	2.3	3.0	intron	bru-3 -	chr3L_10_13685001	chr3L_13685001	0.30	RAL-563
235	chr3L	13954559	13954592	flea	4774	4962	5	33	'4-1	63.91	2.9	1.3	intron	CG32137 +	chr3L_5_13950001	chr3L_13950001	0.80	RAL-563
236	chr3L	14214061	14214119	flea	4758	4992	10	58	'9-1	67.68	4.6	1.8	intron	nuf +	chr3L_10_14210001	chr3L_14210001	0.90	RAL-563
237	chr3L	14254324	14254377	roo	410	8693	6	53	'4-2	68.05	0.8	3.3	intergenic	not near genes	chr3L_6_14250001	chr3L_14250001	0.67	RAL-563
238	chr3L	14499505	14499585	roo	406	8661	9	80	'3-6	67.85	2.8	2.4	intron	bbg -	chr3L_9_14495001	chr3L_14495001	0.33	RAL-563
239	chr3L	15035130	15035203	pogo	2096	6	6	73	'2-4	66.00	2.2	1.9	intron	Sytbeta -	chr3L_6_15035001	chr3L_15035001	0.33	RAL-563
240	chr3L	15642184	15642206	jockey	4786	4758	5	22	'3-2	63.36	2.0	1.7	intron	comm3 -	chr3L_5_15640001	chr3L_15640001	0.60	RAL-563
241	chr3L	16408144	16408215	hobo	2709	8	15	71	'6-9	63.90	5.9	2.2	intron	fax -	chr3L_15_16405001	chr3L_16405001	0.40	RAL-563
242	chr3L	16411948	16412025	pogo	1	2095	11	77	'6-5	69.58	1.3	4.8	intergenic	fax -	chr3L_11_16410001	chr3L_16410001	0.55	RAL-563
243	chr3L	16807714	16807777	P-element	14	2886	8	63	'4-4	46.11	3.7	1.7	5` UTR,intron	CG9674 -,nudC +	chr3L_8_16805001	chr3L_16805001	0.50	RAL-563
244	chr3L	17006140	17006223	mdg3	5253	249	15	83	'8-7	68.88	2.3	4.5	intron	CG3764 -	chr3L_15_17005001	chr3L_17005001	0.53	RAL-563
245	chr3L	17223525	17223574	pogo	2095	8	10	49	'8-2	75.64	3.3	2.3	intron	Rbp6 -	chr3L_10_17220001	chr3L_17220001	0.80	RAL-563
246	chr3L	17263265	17263453	Tabor	462	464	6	188	'1-5	62.96	3.2	1.4	intron	CR43870 +	chr3L_6_17260001	chr3L_17260001	0.17	RAL-563
247	chr3L	17268110	17268354	hopper	1402	20	9	244	'1-8	66.39	3.4	2.0	intergenic	not near genes	chr3L_9_17265001	chr3L_17265001	0.11	RAL-563
248	chr3L	17394486	17394558	roo	404	2	10	72	'3-7	62.06	2.1	3.2	intergenic	not near genes	chr3L_10_17390001	chr3L_17390001	0.30	RAL-563
249	chr3L	17710270	17710296	Doc	37	11	6	26	'3-3	66.89	6.7	0.8	intron	Ccn +	chr3L_6_17710001	chr3L_17710001	0.50	RAL-563
250	chr3L	17945150	17945233	flea	4754	254	7	83	'3-4	67.38	1.0	3.5	intron	CG43174 +	chr3L_7_17945001	chr3L_17945001	0.43	RAL-563
251	chr3L	17999497	17999551	P-element	2872	2886	14	54	'6-8	46.03	5.6	2.1	intron	Eip75B -	chr3L_14_17995001	chr3L_17995001	0.43	RAL-563
252	chr3L	17999935	17999994	P-element	17	1	13	59	'4-9	49.96	2.9	3.3	intron	Eip75B -	chr3L_13_17995001	chr3L_17995001	0.31	RAL-563
253	chr3L	18259318	18259448	Tabor	7029	473	11	130	'3-8	60.55	1.2	5.0	intergenic	not near genes	chr3L_11_18255001	chr3L_18255001	0.27	RAL-563
254	chr3L	19274800	19274821	transib2	1	22	7	21	'4-3	64.88	5.5	1.1	intergenic	not near genes	chr3L_7_19270001	chr3L_19270001	0.57	RAL-563
255	chr3L	19349950	19350000	1360	9	3199	12	50	'5-7	51.93	1.8	4.3	intron	CG32206 -	chr3L_12_19345001	chr3L_19345001	0.42	RAL-563
256	chr3L	19396915	19396946	Doc	2	32	9	31	'5-4	63.29	8.1	1.0	intron	CG32206 -	chr3L_9_19395001	chr3L_19395001	0.56	RAL-563
257	chr3L	20051905	20051953	I-element	19	5350	7	48	'4-3	63.73	0.6	4.4	intergenic	not near genes	chr3L_7_20050001	chr3L_20050001	0.57	RAL-563
258	chr3L	20063749	20063927	hopper	4	101	11	178	'10-1	67.38	4.7	1.9	intron	sNPF-R -	chr3L_11_20060001	chr3L_20060001	0.91	RAL-563
259	chr3L	20196831	20196883	roo	405	25	8	52	'4-4	71.63	1.6	3.1	intron	CG42674 -	chr3L_8_20195001	chr3L_20195001	0.50	RAL-563
260	chr3L	20361689	20361769	pogo	2099	2	9	80	'3-6	67.08	0.6	5.6	intergenic	DNApol-alpha60 -,Toll-9 -	chr3L_9_20360001	chr3L_20360001	0.33	RAL-563
261	chr3L	20507120	20507178	mdg3	5272	243	13	58	'4-9	58.94	4.4	2.4	intron,exon	CG32425 +,CG5078 +	chr3L_13_20505001	chr3L_20505001	0.31	RAL-563
262	chr3L	21049743	21049772	jockey	6	35	12	29	'8-4	64.98	6.1	1.7	intron	siz +	chr3L_12_21045001	chr3L_21045001	0.67	RAL-563
263	chr3L	21868270	21868320	roo	13	409	13	50	'7-6	63.65	4.9	2.2	intron	mub +	chr3L_13_21865001	chr3L_21865001	0.54	RAL-563
264	chr3L	22320352	22320370	jockey	26	13	8	18	'5-3	59.22	4.8	1.4	intron	Ten-m -	chr3L_8_22320001	chr3L_22320001	0.62	RAL-563
265	chr3L	22336476	22336533	roo	25	410	6	57	'2-4	69.05	3.9	1.2	intron	Ten-m -	chr3L_6_22335001	chr3L_22335001	0.33	RAL-563
266	chr3L	22466421	22466493	Transpac	1	301	19	72	'7-12	65.80	4.7	3.3	5` UTR	CG11438 +	chr3L_19_22465001	chr3L_22465001	0.37	RAL-563
267	chr3L	22564489	22564544	opus	12	484	9	55	'5-4	67.77	2.7	2.4	intergenic	not near genes	chr3L_9_22560001	chr3L_22560001	0.56	RAL-563
268	chr3L	22641965	22641997	Doc	23	2	8	32	'6-2	71.22	1.9	2.8	intergenic	not near genes	chr3L_8_22640001	chr3L_22640001	0.75	RAL-563
269	chr3L	22681130	22681158	jockey	4679	4705	9	28	'3-6	68.75	4.4	1.7	intergenic	not near genes	chr3L_9_22680001	chr3L_22680001	0.33	RAL-563
270	chr3L	23146487	23146518	1360	3383	37	9	31	'5-4	66.40	3.6	2.0	intergenic	not near genes	chr3L_9_23145001	chr3L_23145001	0.56	RAL-563
271	chr3L	23214450	23214500	pogo	2	2095	4	50	'2-2	74.37	3.7	0.9	intron	nAChRalpha4 +	chr3L_4_23210001	chr3L_23210001	0.50	RAL-563
272	chr3L	23282775	23282805	Juan	33	3	10	30	'2-8	68.67	1.4	4.2	intron	nAChRalpha4 +	chr3L_10_23280001	chr3L_23280001	0.20	RAL-563
273	chr3L	24763665	24763718	flea	4998	11	4	53	'2-2	63.42	1.2	1.8	intron	scro +	chr3L_4_24760001	chr3L_24760001	0.50	RAL-563
274	chr3L	24904250	24904307	opus	481	7	6	57	'3-3	65.36	2.6	1.7	intergenic	not near genes	chr3L_6_24900001	chr3L_24900001	0.50	RAL-563
275	chr3L	25414116	25414163	Tabor	6857	470	5	47	'2-3	63.08	0.6	3.1	intergenic	not near genes	chr3L_5_25410001	chr3L_25410001	0.40	RAL-563
276	chr3L	25611364	25611411	Stalker2	7269	7638	7	47	'1-6	61.08	1.3	3.0	intron	CG41343 -	chr3L_7_25610001	chr3L_25610001	0.14	RAL-563
277	chr3R	5381208	5381281	pogo	10	2100	6	73	'3-3	71.08	1.9	2.1	intron	kkv -	chr3R_6_5380001	chr3R_5380001	0.50	RAL-563
278	chr3R	5440282	5440353	Burdock	6140	249	6	71	'2-4	66.74	1.0	3.0	intron	CG14669 +	chr3R_6_5440001	chr3R_5440001	0.33	RAL-563
279	chr3R	5522318	5522377	pogo	13	2093	6	59	'4-2	68.97	0.7	3.5	intron,intron,3` UTR	Nmdar1 -,Itp-r83A +,CR43845 -	chr3R_6_5520001	chr3R_5520001	0.67	RAL-563
280	chr3R	5564701	5564776	pogo	2100	8	13	75	'10-3	65.43	2.9	3.3	exon	CG14671 -	chr3R_13_5560001	chr3R_5560001	0.77	RAL-563
281	chr3R	5765357	5765420	17.6	477	3	8	63	'6-2	70.78	6.1	1.1	intron	CG2082 -	chr3R_8_5765001	chr3R_5765001	0.75	RAL-563
282	chr3R	6075305	6075452	roo	8664	8971	13	147	'10-3	68.68	3.6	2.8	intergenic	not near genes	chr3R_13_6075001	chr3R_6075001	0.77	RAL-563
283	chr3R	6482513	6482562	roo	9055	8675	10	49	'2-8	65.35	0.4	7.1	intron	CG15186 +	chr3R_10_6480001	chr3R_6480001	0.20	RAL-563
284	chr3R	6696851	6696916	I-element	5295	5348	8	65	'7-1	64.11	3.1	2.0	intergenic	not near genes	chr3R_8_6695001	chr3R_6695001	0.88	RAL-563
285	chr3R	6859501	6859528	F-element	294	321	12	27	'4-8	61.75	6.3	1.6	intergenic	not near genes	chr3R_12_6855001	chr3R_6855001	0.33	RAL-563
286	chr3R	7038715	7038741	mdg1	7064	7038	5	26	'2-3	63.37	4.0	1.0	5` UTR	CR44933 +	chr3R_5_7035001	chr3R_7035001	0.40	RAL-563
287	chr3R	7211889	7211961	roo	402	3	10	72	'7-3	67.56	2.8	2.6	intergenic	not near genes	chr3R_10_7210001	chr3R_7210001	0.70	RAL-563
288	chr3R	7362069	7362151	blood	381	1	14	82	'9-5	64.97	4.0	2.8	5` UTR	CG17944 -	chr3R_14_7360001	chr3R_7360001	0.64	RAL-563
289	chr3R	7484952	7485109	jockey	61	33	4	157	'1-3	66.33	4.6	0.7	intergenic	not near genes	chr3R_4_7480001	chr3R_7480001	0.25	RAL-563
290	chr3R	7492310	7492465	1360	3303	11	18	155	'2-16	69.35	2.4	5.3	intron	alpha-Est10 -	chr3R_18_7490001	chr3R_7490001	0.11	RAL-563
291	chr3R	7819690	7819766	412	3	492	9	76	'6-3	63.25	2.7	2.4	intron	CG34384 +	chr3R_9_7815001	chr3R_7815001	0.67	RAL-563
292	chr3R	8017752	8017775	mdg1	7043	7256	5	23	'3-2	65.34	2.0	1.7	intron	CG2747 -	chr3R_5_8015001	chr3R_8015001	0.60	RAL-563
293	chr3R	8109758	8109817	1360	3383	2	14	59	'8-6	70.64	3.8	2.9	intron	puc +	chr3R_14_8105001	chr3R_8105001	0.57	RAL-563
294	chr3R	8172109	8172178	roo	8676	409	10	69	'4-6	67.98	3.9	2.0	intron	grn -	chr3R_10_8170001	chr3R_8170001	0.40	RAL-563
295	chr3R	8447094	8447165	Tabor	9	484	8	71	'3-5	67.00	3.4	1.8	intron	CG45263 -	chr3R_8_8445001	chr3R_8445001	0.38	RAL-563
296	chr3R	8461443	8461506	412	20	495	9	63	'3-6	66.96	3.1	2.2	intron	CG45263 -	chr3R_9_8460001	chr3R_8460001	0.33	RAL-563
297	chr3R	8621386	8621553	roo	397	8785	8	167	'7-1	64.18	3.1	2.0	intron	5-HT2B +	chr3R_8_8620001	chr3R_8620001	0.88	RAL-563
298	chr3R	9145447	9145519	roo	8668	9067	9	72	'5-4	63.56	3.2	2.1	intron	pum -	chr3R_9_9145001	chr3R_9145001	0.56	RAL-563
299	chr3R	9476518	9476549	roo	32	8665	7	31	'2-5	63.07	3.3	1.6	intron	CG16779 -	chr3R_7_9475001	chr3R_9475001	0.29	RAL-563
300	chr3R	10778967	10779138	Bari1	6	1620	6	171	'5-1	67.03	3.7	1.3	intergenic	not near genes	chr3R_6_10775001	chr3R_10775001	0.83	RAL-563
301	chr3R	10941395	10941474	roo	8666	409	12	79	'4-8	67.17	2.9	3.1	intergenic	not near genes	chr3R_12_10940001	chr3R_10940001	0.33	RAL-563
302	chr3R	10942149	10942234	roo	408	8659	13	85	'8-5	64.07	4.0	2.6	intergenic	not near genes	chr3R_13_10940001	chr3R_10940001	0.62	RAL-563
303	chr3R	11163032	11163082	mdg1	7452	24	5	50	'4-1	62.40	0.6	3.1	exon	CG4757 +	chr3R_5_11160001	chr3R_11160001	0.80	RAL-563
304	chr3R	11345284	11345365	roo	8666	411	10	81	'6-4	66.40	3.0	2.5	intron	pros +	chr3R_10_11345001	chr3R_11345001	0.60	RAL-563
305	chr3R	11526780	11526852	pogo	2098	8	7	72	'3-4	62.61	0.5	4.7	intergenic	not near genes	chr3R_7_11525001	chr3R_11525001	0.43	RAL-563
306	chr3R	11553672	11553731	hopper	1396	1412	5	59	'1-4	62.13	3.8	1.0	intergenic	CG14708 +	chr3R_5_11550001	chr3R_11550001	0.20	RAL-563
307	chr3R	11859948	11860033	gypsy5	6938	412	13	85	'1-12	66.10	2.4	3.8	intron	CG6959 -	chr3R_13_11855001	chr3R_11855001	0.08	RAL-563
308	chr3R	11939730	11939781	FB	12	14	4	51	'2-2	69.85	2.0	1.3	intron	Cad87A -	chr3R_4_11935001	chr3R_11935001	0.50	RAL-563
309	chr3R	12591143	12591199	roo	409	8689	11	56	'5-6	74.42	4.7	1.9	intron	Octbeta2R -	chr3R_11_12590001	chr3R_12590001	0.45	RAL-563
310	chr3R	12899164	12899191	jockey	36	9	7	27	'5-2	61.29	4.8	1.2	intergenic	not near genes	chr3R_7_12895001	chr3R_12895001	0.71	RAL-563
311	chr3R	12929810	12929889	HMS-Beagle2	7194	6885	10	79	'4-6	65.60	4.0	2.0	intron	beat-Vb +	chr3R_10_12925001	chr3R_12925001	0.40	RAL-563
312	chr3R	12946111	12946126	BS	3	18	5	15	'2-3	58.29	3.6	1.1	intergenic	not near genes	chr3R_5_12945001	chr3R_12945001	0.40	RAL-563
313	chr3R	13543900	13543939	1360	28	3378	5	39	'2-3	66.20	1.0	2.5	intergenic	CG31337 -	chr3R_5_13540001	chr3R_13540001	0.40	RAL-563
314	chr3R	13580378	13580404	I-element	6	32	5	26	'2-3	59.26	2.4	1.5	intergenic	not near genes	chr3R_5_13580001	chr3R_13580001	0.40	RAL-563
315	chr3R	13732415	13732463	jockey	4973	6	14	48	'3-11	63.89	4.2	2.7	intron	CG34383 +	chr3R_14_13730001	chr3R_13730001	0.21	RAL-563
316	chr3R	13852439	13852503	mdg1	420	7054	4	64	'3-1	60.33	0.7	2.4	intergenic	not near genes	chr3R_4_13850001	chr3R_13850001	0.75	RAL-563
317	chr3R	14097039	14097114	transib2	1	2819	12	75	'6-6	66.21	3.4	2.7	intergenic	CCHa1 -,CG9920 -	chr3R_12_14095001	chr3R_14095001	0.50	RAL-563
318	chr3R	14614893	14614910	jockey	4681	4705	8	17	'5-3	58.11	5.2	1.3	intron	CG14853 +	chr3R_8_14610001	chr3R_14610001	0.62	RAL-563
319	chr3R	14773937	14774005	1360	3386	8	12	68	'6-6	66.07	1.8	4.3	intron	jvl +	chr3R_12_14770001	chr3R_14770001	0.50	RAL-563
320	chr3R	15231821	15231881	roo	2	402	11	60	'6-5	67.81	2.2	3.4	intergenic	CG34316 +,CR43471 -,tefu -	chr3R_11_15230001	chr3R_15230001	0.55	RAL-563
321	chr3R	15512810	15512891	412	2	495	10	81	'2-8	61.89	2.6	2.8	intergenic	not near genes	chr3R_10_15510001	chr3R_15510001	0.20	RAL-563
322	chr3R	15790050	15790066	flea	4733	4710	16	16	'9-7	67.06	9.2	1.6	exon	c(3)G -	chr3R_16_15790001	chr3R_15790001	0.56	RAL-563
323	chr3R	15974052	15974119	P-element	7	2883	15	67	'5-10	48.80	13.5	1.0	intron	Hel89B +	chr3R_15_15970001	chr3R_15970001	0.33	RAL-563
324	chr3R	16033440	16033520	3S18	6079	5767	4	80	'1-3	66.57	1.0	2.0	intron	pnr +	chr3R_4_16030001	chr3R_16030001	0.25	RAL-563
325	chr3R	16606702	16606752	roo	394	10	8	50	'5-3	60.20	3.3	1.9	intergenic	not near genes	chr3R_8_16605001	chr3R_16605001	0.62	RAL-563
326	chr3R	16898560	16898649	Tc3	316	316	4	89	'2-2	75.90	2.5	1.1	intron	iab-8 -	chr3R_4_16895001	chr3R_16895001	0.50	RAL-563
327	chr3R	16898566	16898723	1360	3388	3379	18	157	'17-1	70.98	2.6	5.0	intron	iab-8 -	chr3R_18_16895001	chr3R_16895001	0.94	RAL-563
328	chr3R	16935081	16935159	Tirant	9	403	17	78	'1-16	68.74	5.2	2.7	intron	Abd-B -	chr3R_17_16935001	chr3R_16935001	0.06	RAL-563
329	chr3R	17428062	17428098	FB	28	13	9	36	'3-6	65.27	4.8	1.6	intron	CG5873 +	chr3R_9_17425001	chr3R_17425001	0.33	RAL-563
330	chr3R	17519599	17519619	copia	4898	4878	4	20	'3-1	68.68	2.1	1.3	intergenic	not near genes	chr3R_4_17515001	chr3R_17515001	0.75	RAL-563
331	chr3R	17712612	17712690	412	2	493	8	78	'3-5	59.39	4.3	1.5	intron	osa -	chr3R_8_17710001	chr3R_17710001	0.38	RAL-563
332	chr3R	18817546	18817602	flea	228	4755	6	56	'1-5	70.05	1.7	2.2	intron	CG18208 -	chr3R_6_18815001	chr3R_18815001	0.17	RAL-563
333	chr3R	18817885	18817946	FB	5	11	11	61	'5-6	64.75	1.4	4.6	intron	CG18208 -	chr3R_11_18815001	chr3R_18815001	0.45	RAL-563
334	chr3R	19346638	19346705	hobo	5	2938	17	67	'9-8	63.28	3.0	4.2	intergenic	not near genes	chr3R_17_19345001	chr3R_19345001	0.53	RAL-563
335	chr3R	19631001	19631028	G2	162	137	8	27	'5-3	58.87	3.9	1.6	intron	CG6231 -	chr3R_8_19630001	chr3R_19630001	0.62	RAL-563
336	chr3R	19937074	19937159	Transpac	312	4918	22	85	'17-5	65.70	5.6	3.3	intron	Hs6st -	chr3R_22_19935001	chr3R_19935001	0.77	RAL-563
337	chr3R	20137272	20137314	Burdock	6149	6364	6	42	'5-1	66.57	4.4	1.1	intergenic	not near genes	chr3R_6_20135001	chr3R_20135001	0.83	RAL-563
338	chr3R	20145803	20145875	roo	402	8666	15	72	'4-11	63.86	1.6	5.8	intergenic	not near genes	chr3R_15_20145001	chr3R_20145001	0.27	RAL-563
339	chr3R	20147879	20147908	1360	247	265	4	29	'2-2	61.07	7.8	0.5	intergenic	not near genes	chr3R_4_20145001	chr3R_20145001	0.50	RAL-563
340	chr3R	20149714	20149780	1360	11	3387	15	66	'5-10	65.43	3.4	3.4	intergenic	not near genes	chr3R_15_20145001	chr3R_20145001	0.33	RAL-563
341	chr3R	20348278	20348364	Transpac	102	4925	16	86	'10-6	62.97	5.0	2.7	intergenic	not near genes	chr3R_16_20345001	chr3R_20345001	0.62	RAL-563
342	chr3R	20375036	20375100	297	6961	8	4	64	'2-2	58.33	2.2	1.2	intergenic	not near genes	chr3R_4_20375001	chr3R_20375001	0.50	RAL-563
343	chr3R	20423503	20423588	Tirant	1	401	23	85	'2-21	68.94	2.8	6.1	intron	Gfrl -	chr3R_23_20420001	chr3R_20420001	0.09	RAL-563
344	chr3R	20531168	20531234	mdg1	7047	282	8	66	'6-2	63.87	3.2	1.9	intergenic	not near genes	chr3R_8_20530001	chr3R_20530001	0.75	RAL-563
345	chr3R	21590345	21590419	1360	2	3	5	74	'2-3	66.46	2.5	1.4	intron	InR -	chr3R_5_21590001	chr3R_21590001	0.40	RAL-563
346	chr3R	22250116	22250192	mdg1	7040	418	6	76	'2-4	64.67	2.6	1.7	intron	SKIP +	chr3R_6_22250001	chr3R_22250001	0.33	RAL-563
347	chr3R	22659544	22659598	roo	1	9046	10	54	'8-2	60.48	4.3	1.9	intron	wake +	chr3R_10_22655001	chr3R_22655001	0.80	RAL-563
348	chr3R	23192385	23192472	roo	163	8684	5	87	'1-4	64.29	4.2	1.0	intron	cnc -	chr3R_5_23190001	chr3R_23190001	0.20	RAL-563
349	chr3R	23883003	23883070	412	8	7541	10	67	'6-4	63.48	3.5	2.2	intron	Pli -	chr3R_10_23880001	chr3R_23880001	0.60	RAL-563
350	chr3R	24665281	24665304	copia	4869	4895	4	23	'1-3	69.04	6.5	0.5	5` UTR	slo +	chr3R_4_24665001	chr3R_24665001	0.25	RAL-563
351	chr3R	25174782	25174838	blood	380	6	8	56	'3-5	65.50	1.9	2.8	intron	lobo -	chr3R_8_25170001	chr3R_25170001	0.38	RAL-563
352	chr3R	27724516	27724568	hobo	2920	3	9	52	'5-4	71.61	6.0	1.3	intergenic	not near genes	chr3R_9_27720001	chr3R_27720001	0.56	RAL-563
353	chr3R	27763385	27763444	opus	498	22	6	59	'2-4	67.14	3.7	1.3	intergenic	not near genes	chr3R_6_27760001	chr3R_27760001	0.33	RAL-563
354	chr3R	29123276	29123519	P-element	2886	2848	19	243	'18-1	54.41	2.7	5.1	intergenic	CG11880 +,yem -	chr3R_19_29120001	chr3R_29120001	0.95	RAL-563
355	chr3R	29453781	29453840	roo	5	394	8	59	'7-1	60.55	3.3	1.9	intron	Ptp99A +	chr3R_8_29450001	chr3R_29450001	0.88	RAL-563
356	chr3R	29703051	29703079	blood	7008	24	4	28	'2-2	67.77	4.4	0.7	intergenic	not near genes	chr3R_4_29700001	chr3R_29700001	0.50	RAL-563
357	chr3R	30337043	30337122	blood	7013	7389	8	79	'1-7	63.41	4.4	1.5	intron	hdc +	chr3R_8_30335001	chr3R_30335001	0.12	RAL-563
358	chr3R	30553578	30553633	springer	7146	7503	13	55	'10-3	65.08	4.0	2.6	intron	tmod +	chr3R_13_30550001	chr3R_30550001	0.77	RAL-563
359	chr3R	31191279	31191303	Doc	28	4	11	24	'7-4	59.28	5.4	1.7	intron	mesh -	chr3R_11_31190001	chr3R_31190001	0.64	RAL-563
360	chr3R	31241331	31241409	roo	3	409	18	78	'8-10	62.45	3.3	4.2	intron	qless -	chr3R_18_31240001	chr3R_31240001	0.44	RAL-563
361	chr3R	31264170	31264209	jockey	4979	17	14	39	'2-12	59.33	2.4	4.1	intergenic	CG18673 +	chr3R_14_31260001	chr3R_31260001	0.14	RAL-563
362	chr4	1230635	1230698	P-element	1	14	12	63	'7-5	46.86	1.0	6.0	5` UTR	Dyrk3 -	chr4_12_1230001	chr4_1230001	0.58	RAL-563
363	chrX	520115	520133	Doc3-element	4718	4702	4	18	'2-2	65.28	8.0	0.4	intron,intron	elav -,arg +	chrX_4_520001	chrX_520001	0.50	RAL-563
364	chrX	669094	669119	roo	9040	402	4	25	'1-3	69.33	3.4	0.9	intergenic	not near genes	chrX_4_665001	chrX_665001	0.25	RAL-563
365	chrX	1205349	1205601	opus	112	7439	10	252	'9-1	75.37	2.9	2.6	3` UTR	CG11381 +	chrX_10_1205001	chrX_1205001	0.90	RAL-563
366	chrX	1418426	1418517	297	389	175	4	91	'2-2	68.80	3.9	0.8	intron	futsch +	chrX_4_1415001	chrX_1415001	0.50	RAL-563
367	chrX	1693692	1693735	roo	405	29	8	43	'6-2	67.24	1.8	2.9	exon,3` UTR	CG14798 +,a6 -	chrX_8_1690001	chrX_1690001	0.75	RAL-563
368	chrX	2572462	2572512	springer	7502	7315	8	50	'7-1	67.71	6.2	1.1	intron	Pdfr +	chrX_8_2570001	chrX_2570001	0.88	RAL-563
369	chrX	2661196	2661269	roo	407	8664	4	73	'3-1	66.59	1.7	1.5	intron	sgg +	chrX_4_2660001	chrX_2660001	0.75	RAL-563
370	chrX	2781263	2781291	FB	33	5	7	28	'4-3	66.37	1.5	2.8	intron	kirre +	chrX_7_2780001	chrX_2780001	0.57	RAL-563
371	chrX	3300327	3300389	roo	9053	8663	8	62	'1-7	66.79	0.9	4.2	intron	dnc +	chrX_8_3300001	chrX_3300001	0.12	RAL-563
372	chrX	3304384	3304416	jockey	5	19	9	32	'3-6	70.19	5.5	1.4	intron	dnc +	chrX_9_3300001	chrX_3300001	0.33	RAL-563
373	chrX	3716932	3717006	Tirant	8107	8496	9	74	'5-4	65.29	2.0	3.0	intron	Rala -	chrX_9_3715001	chrX_3715001	0.56	RAL-563
374	chrX	3744791	3744822	P-element	2	2885	5	31	'4-1	46.83	6.1	0.7	intron	tlk +	chrX_5_3740001	chrX_3740001	0.80	RAL-563
375	chrX	4524937	4524999	Transpac	5227	4936	10	62	'8-2	63.90	4.1	2.0	intron	CR32773 -	chrX_10_4520001	chrX_4520001	0.80	RAL-563
376	chrX	4774850	4775021	Doc	79	119	4	171	'3-1	60.67	3.1	1.0	intergenic	CR45515 -	chrX_4_4770001	chrX_4770001	0.75	RAL-563
377	chrX	4897747	4897952	mdg3	5498	65	17	205	'16-1	67.76	1.6	6.5	intron	CG42594 +	chrX_17_4895001	chrX_4895001	0.94	RAL-563
378	chrX	5108557	5108624	pogo	11	2095	6	67	'1-5	65.31	2.3	1.8	intron,intron	CG15465 +,rg +	chrX_6_5105001	chrX_5105001	0.17	RAL-563
379	chrX	5113564	5113619	hobo	9	2927	10	55	'8-2	57.50	2.1	3.2	intron,intron	CG15465 +,rg +	chrX_10_5110001	chrX_5110001	0.80	RAL-563
380	chrX	5244835	5244944	hobo	2713	2	21	109	'6-15	68.66	3.1	5.1	intron,intron	CG15465 +,rg +	chrX_21_5240001	chrX_5240001	0.29	RAL-563
381	chrX	5385352	5385430	flea	253	4758	7	78	'1-6	66.48	1.2	3.2	intron	SK +	chrX_7_5385001	chrX_5385001	0.14	RAL-563
382	chrX	6387757	6387807	I-element	8	5335	5	50	'3-2	65.43	3.1	1.2	intergenic	not near genes	chrX_5_6385001	chrX_6385001	0.60	RAL-563
383	chrX	6424292	6424362	roo	8675	409	9	70	'4-5	62.22	0.3	6.9	intron	CG42340 -	chrX_9_6420001	chrX_6420001	0.44	RAL-563
384	chrX	7031800	7031855	hobo	21	2710	6	55	'1-5	64.95	4.4	1.1	intron	CG12541 -	chrX_6_7030001	chrX_7030001	0.17	RAL-563
385	chrX	7066913	7066957	3S18	6082	10	5	44	'1-4	65.03	0.0	5.0	intergenic	not near genes	chrX_5_7065001	chrX_7065001	0.20	RAL-563
386	chrX	7448950	7448995	jockey	4980	4688	5	45	'1-4	59.61	1.1	2.4	5` UTR	CR45533 +	chrX_5_7445001	chrX_7445001	0.20	RAL-563
387	chrX	7808188	7808261	flea	4764	255	21	73	'12-9	68.86	4.7	3.7	intergenic	not near genes	chrX_21_7805001	chrX_7805001	0.57	RAL-563
388	chrX	9121254	9121278	jockey	4790	4763	12	24	'8-4	60.96	3.5	2.7	intergenic	CR45539 -	chrX_12_9120001	chrX_9120001	0.67	RAL-563
389	chrX	9410200	9410258	roo	8686	409	7	58	'1-6	64.52	3.1	1.7	intron	mgl -	chrX_7_9410001	chrX_9410001	0.14	RAL-563
390	chrX	9508153	9508168	jockey	4698	4684	4	15	'1-3	56.23	0.4	2.9	intron	CG32700 -	chrX_4_9505001	chrX_9505001	0.25	RAL-563
391	chrX	9514134	9514214	McClintock	5953	478	12	80	'7-5	72.00	2.9	3.1	intron	CG32700 -	chrX_12_9510001	chrX_9510001	0.58	RAL-563
392	chrX	9540864	9540934	hobo	4	2935	11	70	'2-9	63.49	1.9	3.8	intron	CG32700 -	chrX_11_9540001	chrX_9540001	0.18	RAL-563
393	chrX	9584301	9584339	Juan	4037	4191	8	38	'4-4	61.60	1.7	3.0	5` UTR	CR45541 +	chrX_8_9580001	chrX_9580001	0.50	RAL-563
394	chrX	10029628	10029691	hobo	2931	7	9	63	'4-5	70.73	1.9	3.1	intron	Cht6 +	chrX_9_10025001	chrX_10025001	0.44	RAL-563
395	chrX	10428787	10428870	roo	8662	404	14	83	'7-7	64.81	2.4	4.1	intron	CG32683 -	chrX_14_10425001	chrX_10425001	0.50	RAL-563
396	chrX	10684531	10684557	roo	8689	8664	8	26	'2-6	65.72	5.2	1.3	intron	X11Lbeta +	chrX_8_10680001	chrX_10680001	0.25	RAL-563
397	chrX	10757684	10757738	hobo	2	2930	8	54	'2-6	67.10	3.3	1.9	intergenic	Rph -	chrX_8_10755001	chrX_10755001	0.25	RAL-563
398	chrX	10759848	10759907	pogo	2089	12	4	59	'2-2	66.64	0.9	2.1	intergenic	Tango5 -	chrX_4_10755001	chrX_10755001	0.50	RAL-563
399	chrX	11243245	11243322	roo	4	410	14	77	'10-4	68.99	5.0	2.3	intron	CG44422 -	chrX_14_11240001	chrX_11240001	0.71	RAL-563
400	chrX	13033078	13033120	I-element	26	5348	6	42	'4-2	70.09	1.2	2.7	intron	rad +	chrX_6_13030001	chrX_13030001	0.67	RAL-563
401	chrX	14354886	14354944	roo	8689	411	4	58	'1-3	72.89	0.4	2.9	intron	dpr8 +	chrX_4_14350001	chrX_14350001	0.25	RAL-563
402	chrX	14953386	14953457	1360	5	2	15	71	'5-10	67.59	4.0	3.0	intron,3` UTR	pdgy -,CR44831 -	chrX_15_14950001	chrX_14950001	0.33	RAL-563
403	chrX	15048734	15048784	S-element	2	32	5	50	'2-3	69.07	3.9	1.0	intron,intron	hiw -,CG5541 +	chrX_5_15045001	chrX_15045001	0.40	RAL-563
404	chrX	16090606	16090856	P-element	2873	2886	15	250	'1-14	50.17	3.2	3.6	intron	Tob -	chrX_15_16090001	chrX_16090001	0.07	RAL-563
405	chrX	18171438	18171469	jockey	4736	4705	6	31	'4-2	62.79	2.8	1.6	3` UTR	Frq1 +	chrX_6_18170001	chrX_18170001	0.67	RAL-563
406	chrX	18193729	18193777	hopper	10	23	6	48	'2-4	63.10	3.0	1.5	intron	Frq2 +	chrX_6_18190001	chrX_18190001	0.33	RAL-563
407	chrX	18239065	18239089	jockey	4560	4582	9	24	'8-1	61.73	1.0	4.5	intergenic	not near genes	chrX_9_18235001	chrX_18235001	0.89	RAL-563
408	chrX	18397587	18397943	pogo	8	31	13	356	'8-5	65.31	1.1	6.2	intron	CG32549 -	chrX_13_18395001	chrX_18395001	0.62	RAL-563
409	chrX	18632878	18632930	mdg3	249	29	11	52	'6-5	67.88	5.0	1.8	intron	wgn -	chrX_11_18630001	chrX_18630001	0.55	RAL-563
410	chrX	19421523	19421604	HMS-Beagle	245	6796	8	81	'2-6	64.50	2.7	2.2	intron	kek5 +	chrX_8_19420001	chrX_19420001	0.25	RAL-563
411	chrX	19887084	19887127	P-element	9	25	14	43	'9-5	43.84	7.5	1.6	intron,exon	Hers +,amn -	chrX_14_19885001	chrX_19885001	0.64	RAL-563
412	chrX	20081058	20081111	mdg3	5475	5257	8	53	'2-6	61.67	1.0	4.0	intergenic	not near genes	chrX_8_20080001	chrX_20080001	0.25	RAL-563
413	chrX	20106339	20106356	hopper	1399	1382	4	17	'2-2	64.67	5.2	0.6	intergenic	not near genes	chrX_4_20105001	chrX_20105001	0.50	RAL-563
414	chrX	20310279	20310294	Transpac	5214	310	4	15	'1-3	67.12	1.2	1.8	3` UTR	CG1504 -	chrX_4_20310001	chrX_20310001	0.25	RAL-563
415	chrX	20852672	20852748	mdg3	5258	247	7	76	'4-3	72.49	0.8	3.9	intron	shakB -	chrX_7_20850001	chrX_20850001	0.57	RAL-563
416	chrX	20999554	20999572	BS	14	5	4	18	'1-3	58.66	1.5	1.6	intergenic	not near genes	chrX_4_20995001	chrX_20995001	0.25	RAL-563
417	chrX	21131846	21131900	FB	13	10	6	54	'2-4	59.67	0.6	3.8	intron	CG34120 +	chrX_6_21130001	chrX_21130001	0.33	RAL-563
418	chrX	21399412	21399454	pogo	14	2075	5	42	'1-4	64.22	2.5	1.4	intergenic	not near genes	chrX_5_21395001	chrX_21395001	0.20	RAL-563
419	chrX	21401399	21401417	roo	411	9054	5	18	'3-2	63.59	3.7	1.1	intergenic	not near genes	chrX_5_21400001	chrX_21400001	0.60	RAL-563
420	chrX	21582862	21582937	roo	8664	403	11	75	'2-9	66.11	3.2	2.6	intergenic	not near genes	chrX_11_21580001	chrX_21580001	0.18	RAL-563
421	chrX	21667903	21667926	gypsy2	32	6497	11	23	'7-4	63.44	5.2	1.8	intergenic	not near genes	chrX_11_21665001	chrX_21665001	0.64	RAL-563
422	chrX	21907796	21907818	accord	394	352	4	22	'3-1	63.39	0.0	4.0	intergenic	not near genes	chrX_4_21905001	chrX_21905001	0.75	RAL-563
423	chrX	22719020	22719077	roo	8668	9052	8	57	'3-5	68.57	3.8	1.7	intron	CR44997 +	chrX_8_22715001	chrX_22715001	0.38	RAL-563
424	chrX	23009962	23010007	Stalker2	379	7258	5	45	'1-4	58.69	2.4	1.5	exon	FucTC -	chrX_5_23005001	chrX_23005001	0.20	RAL-563
425	chrX	23065001	23065057	Burdock	6135	228	4	56	'3-1	70.54	1.3	1.7	intergenic	not near genes	chrX_4_23065001	chrX_23065001	0.75	RAL-563