SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	131877	131935	P-element	2883	10	6	58	'5-1	54.49	4.8	1.0	intron	CG11455 +	chr2L_6_130001	chr2L_130001	0.83	RAL-535
2	chr2L	469189	469273	opus	109	498	22	84	'8-14	65.71	6.0	3.1	intron	CG4297 -	chr2L_22_465001	chr2L_465001	0.36	RAL-535
3	chr2L	903808	903883	1360	3387	3387	34	75	'20-14	65.22	5.2	5.5	intergenic	CR45261 +	chr2L_34_900001	chr2L_900001	0.59	RAL-535
4	chr2L	1458083	1458105	1360	7	30	8	22	'2-6	70.10	5.0	1.3	intergenic	not near genes	chr2L_8_1455001	chr2L_1455001	0.25	RAL-535
5	chr2L	1481551	1481629	412	6	496	13	78	'3-10	66.32	3.9	2.7	intergenic	not near genes	chr2L_13_1480001	chr2L_1480001	0.23	RAL-535
6	chr2L	1557088	1557168	Bari1	2	1704	10	80	'6-4	64.43	3.6	2.2	intron	haf +	chr2L_10_1555001	chr2L_1555001	0.60	RAL-535
7	chr2L	2204220	2204283	roo	405	4	25	63	'11-14	61.66	5.2	4.0	exon	CG31668 -	chr2L_25_2200001	chr2L_2200001	0.44	RAL-535
8	chr2L	2501127	2501207	Max-element	8534	8234	16	80	'5-11	60.93	4.5	2.9	intergenic	not near genes	chr2L_16_2500001	chr2L_2500001	0.31	RAL-535
9	chr2L	2539587	2539649	412	492	18	18	62	'11-7	62.24	4.9	3.1	intergenic	not near genes	chr2L_18_2535001	chr2L_2535001	0.61	RAL-535
10	chr2L	2621555	2621581	BS	5065	5039	4	26	'2-2	62.84	2.1	1.3	intergenic	not near genes	chr2L_4_2620001	chr2L_2620001	0.50	RAL-535
11	chr2L	2653902	2653962	Transpac	4936	5226	8	60	'2-6	63.55	1.4	3.3	3` UTR	Prosbeta4R1 +	chr2L_8_2650001	chr2L_2650001	0.25	RAL-535
12	chr2L	3079179	3079226	roo	7	9047	4	47	'2-2	69.11	1.1	1.9	intron	toc -	chr2L_4_3075001	chr2L_3075001	0.50	RAL-535
13	chr2L	3191449	3191532	roo	8661	408	13	83	'8-5	64.23	3.1	3.2	intron	CG34393 -	chr2L_13_3190001	chr2L_3190001	0.62	RAL-535
14	chr2L	3221584	3221647	roo	390	8663	16	63	'2-14	67.24	5.1	2.6	intergenic	not near genes	chr2L_16_3220001	chr2L_3220001	0.12	RAL-535
15	chr2L	3648317	3648338	pogo	2095	2073	5	21	'3-2	63.36	2.7	1.4	intron	for -	chr2L_5_3645001	chr2L_3645001	0.60	RAL-535
16	chr2L	3657584	3657619	P-element	2873	28	6	35	'4-2	37.82	0.5	4.0	intergenic	not near genes	chr2L_6_3655001	chr2L_3655001	0.67	RAL-535
17	chr2L	4145957	4146042	roo	8662	411	12	85	'3-9	69.25	2.9	3.1	intergenic	not near genes	chr2L_12_4145001	chr2L_4145001	0.25	RAL-535
18	chr2L	4159591	4159645	412	480	13	15	54	'10-5	66.38	3.5	3.3	intergenic	not near genes	chr2L_15_4155001	chr2L_4155001	0.67	RAL-535
19	chr2L	4869624	4869646	Doc2-element	234	234	5	22	'2-3	83.00	4.7	0.9	intron	pog +	chr2L_5_4865001	chr2L_4865001	0.40	RAL-535
20	chr2L	5382155	5382219	Tirant	8112	395	12	64	'3-9	64.37	3.8	2.5	intergenic	not near genes	chr2L_12_5380001	chr2L_5380001	0.25	RAL-535
21	chr2L	6455417	6455487	blood	372	6	22	70	'12-10	58.44	8.7	2.3	intron	retm -	chr2L_22_6455001	chr2L_6455001	0.55	RAL-535
22	chr2L	7401857	7401884	X-element	4686	12	10	27	'4-6	50.31	2.4	2.9	intron	CG5171 +	chr2L_10_7400001	chr2L_7400001	0.40	RAL-535
23	chr2L	8662714	8662789	hopper	1413	1412	17	75	'9-8	60.37	2.3	5.2	intron	Sema-1a +	chr2L_17_8660001	chr2L_8660001	0.53	RAL-535
24	chr2L	8950668	8950736	1360	3384	5	21	68	'10-11	62.37	6.1	3.0	intron	C1GalTA -	chr2L_21_8950001	chr2L_8950001	0.48	RAL-535
25	chr2L	8992628	8992700	pogo	11	2100	9	72	'1-8	60.50	0.6	5.6	intron	CG9555 +	chr2L_9_8990001	chr2L_8990001	0.11	RAL-535
26	chr2L	9176277	9176342	P-element	2877	2885	9	65	'4-5	55.58	6.0	1.3	intron	tai +	chr2L_9_9175001	chr2L_9175001	0.44	RAL-535
27	chr2L	10414104	10414172	gypsy	9	457	11	68	'6-5	67.42	5.4	1.7	5` UTR	Klp31E +	chr2L_11_10410001	chr2L_10410001	0.55	RAL-535
28	chr2L	10898463	10898518	jockey	4522	4990	10	55	'6-4	63.82	6.9	1.3	intergenic	not near genes	chr2L_10_10895001	chr2L_10895001	0.60	RAL-535
29	chr2L	12057356	12057432	blood	376	4	20	76	'10-10	64.69	6.2	2.8	5` UTR,3` UTR	CG34164 +,RpL7-like +	chr2L_20_12055001	chr2L_12055001	0.50	RAL-535
30	chr2L	12147752	12147819	roo	408	8664	18	67	'9-9	62.91	12.5	1.3	intron	CG31760 +	chr2L_18_12145001	chr2L_12145001	0.50	RAL-535
31	chr2L	12263744	12263778	Doc	1	35	16	34	'7-9	66.58	9.5	1.5	intron	aret +	chr2L_16_12260001	chr2L_12260001	0.44	RAL-535
32	chr2L	12745407	12745484	roo	411	1	14	77	'7-7	64.31	3.3	3.3	intergenic	not near genes	chr2L_14_12745001	chr2L_12745001	0.50	RAL-535
33	chr2L	13315865	13315882	Doc2-element	249	234	5	17	'4-1	72.31	3.0	1.2	intron	CG43778 -	chr2L_5_13315001	chr2L_13315001	0.80	RAL-535
34	chr2L	14057363	14057424	Stalker2	390	7255	17	61	'9-8	59.56	0.2	14.2	intron	nAChRalpha5 +	chr2L_17_14055001	chr2L_14055001	0.53	RAL-535
35	chr2L	14657392	14657475	roo	409	8663	16	83	'2-14	63.54	3.0	4.0	intron	osp -	chr2L_16_14655001	chr2L_14655001	0.12	RAL-535
36	chr2L	14857240	14857312	Max-element	288	8236	4	72	'2-2	58.88	3.0	1.0	intergenic	not near genes	chr2L_4_14855001	chr2L_14855001	0.50	RAL-535
37	chr2L	14965548	14965573	Doc	379	356	9	25	'6-3	54.53	2.5	2.6	intron	CG42313 -	chr2L_9_14965001	chr2L_14965001	0.67	RAL-535
38	chr2L	15142255	15142312	BS	4710	5085	6	57	'5-1	58.61	2.6	1.7	intergenic	not near genes	chr2L_6_15140001	chr2L_15140001	0.83	RAL-535
39	chr2L	15186450	15186532	297	395	6580	4	82	'2-2	73.16	3.3	0.9	intron	CG4168 -	chr2L_4_15185001	chr2L_15185001	0.50	RAL-535
40	chr2L	15234429	15234496	hobo	10	2938	6	67	'2-4	61.89	6.3	0.8	intron	ZnT35C -	chr2L_6_15230001	chr2L_15230001	0.33	RAL-535
41	chr2L	15978484	15978554	Quasimodo	2	7357	6	70	'5-1	66.67	3.2	1.4	intergenic	not near genes	chr2L_6_15975001	chr2L_15975001	0.83	RAL-535
42	chr2L	16067072	16067138	HMS-Beagle2	307	6894	6	66	'4-2	61.46	3.5	1.3	intron	beat-Ia +	chr2L_6_16065001	chr2L_16065001	0.67	RAL-535
43	chr2L	16078838	16078872	G2	3015	2983	5	34	'3-2	61.36	0.5	3.3	intron	beat-Ia +	chr2L_5_16075001	chr2L_16075001	0.60	RAL-535
44	chr2L	16109613	16109692	roo	408	8664	16	79	'2-14	65.59	3.5	3.6	intergenic	not near genes	chr2L_16_16105001	chr2L_16105001	0.12	RAL-535
45	chr2L	16410752	16410769	mdg3	230	247	5	17	'2-3	50.26	2.6	1.4	intron	CG5888 -	chr2L_5_16410001	chr2L_16410001	0.40	RAL-535
46	chr2L	16805089	16805172	mdg3	250	5252	15	83	'6-9	63.92	3.7	3.2	intron,5` UTR	CG13280 -,CG13272 +	chr2L_15_16805001	chr2L_16805001	0.40	RAL-535
47	chr2L	17008629	17008651	X-element	7	23	4	22	'3-1	61.37	9.7	0.4	intergenic	not near genes	chr2L_4_17005001	chr2L_17005001	0.75	RAL-535
48	chr2L	17066061	17066134	flea	254	4763	7	73	'4-3	64.87	1.7	2.6	intergenic	not near genes	chr2L_7_17065001	chr2L_17065001	0.57	RAL-535
49	chr2L	17393345	17393398	FB	7	17	5	53	'3-2	58.29	6.3	0.7	intron	CLIP-190 +	chr2L_5_17390001	chr2L_17390001	0.60	RAL-535
50	chr2L	17448196	17448259	FB	5	9	20	63	'10-10	65.61	6.6	2.6	intron	dl -	chr2L_20_17445001	chr2L_17445001	0.50	RAL-535
51	chr2L	17548701	17548771	roo	410	8674	9	70	'7-2	65.54	2.7	2.4	intergenic	not near genes	chr2L_9_17545001	chr2L_17545001	0.78	RAL-535
52	chr2L	17942704	17942732	opus	499	471	6	28	'4-2	69.46	4.1	1.2	intergenic	not near genes	chr2L_6_17940001	chr2L_17940001	0.67	RAL-535
53	chr2L	17998258	17998321	BS	1	5079	4	63	'3-1	47.29	1.0	2.0	intergenic	not near genes	chr2L_4_17995001	chr2L_17995001	0.75	RAL-535
54	chr2L	18020866	18020907	hobo	5	2915	13	41	'12-1	67.33	4.5	2.4	intron	rdo +	chr2L_13_18020001	chr2L_18020001	0.92	RAL-535
55	chr2L	18038772	18038847	blood	7386	7011	18	75	'11-7	60.13	3.8	3.8	intron	rdo +	chr2L_18_18035001	chr2L_18035001	0.61	RAL-535
56	chr2L	18395495	18395528	Stalker2	34	7249	9	33	'5-4	69.74	4.0	1.8	intergenic	not near genes	chr2L_9_18395001	chr2L_18395001	0.56	RAL-535
57	chr2L	18696383	18696402	roo	394	411	5	19	'3-2	61.10	2.9	1.3	intron	CG10338 +	chr2L_5_18695001	chr2L_18695001	0.60	RAL-535
58	chr2L	18983629	18983689	pogo	2081	4	5	60	'4-1	68.84	1.8	1.8	intron	Swip-1 -	chr2L_5_18980001	chr2L_18980001	0.80	RAL-535
59	chr2L	19172388	19172463	blood	8	379	10	75	'6-4	67.21	2.4	2.9	intron	brat +	chr2L_10_19170001	chr2L_19170001	0.60	RAL-535
60	chr2L	19363332	19363394	P-element	2	2876	8	62	'6-2	48.77	4.8	1.4	intergenic	dnt -	chr2L_8_19360001	chr2L_19360001	0.75	RAL-535
61	chr2L	19680038	19680068	jockey	4791	4762	5	30	'4-1	66.49	7.1	0.6	intron	Lar +	chr2L_5_19680001	chr2L_19680001	0.80	RAL-535
62	chr2L	19834988	19835065	hobo	2707	5	21	77	'6-15	66.58	5.5	3.2	intron	sick +	chr2L_21_19830001	chr2L_19830001	0.29	RAL-535
63	chr2L	19918460	19918491	jockey	17	10	9	31	'5-4	62.04	5.0	1.5	intron	sick +	chr2L_9_19915001	chr2L_19915001	0.56	RAL-535
64	chr2L	20037219	20037299	412	496	2	7	80	'3-4	66.67	2.6	1.9	intron	sNPF +	chr2L_7_20035001	chr2L_20035001	0.43	RAL-535
65	chr2L	20169353	20169431	invader3	3	267	7	78	'4-3	59.56	0.0	7.0	intergenic	not near genes	chr2L_7_20165001	chr2L_20165001	0.57	RAL-535
66	chr2L	20230064	20230286	I-element	5341	434	5	222	'1-4	63.80	1.2	2.3	intergenic	not near genes	chr2L_5_20230001	chr2L_20230001	0.20	RAL-535
67	chr2L	20705443	20705472	F-element	4291	4320	10	29	'4-6	68.98	8.1	1.1	intron	Hr38 -	chr2L_10_20705001	chr2L_20705001	0.40	RAL-535
68	chr2L	21276702	21276775	1360	4	1	9	73	'5-4	70.80	4.2	1.7	intron	CG8671 +	chr2L_9_21275001	chr2L_21275001	0.56	RAL-535
69	chr2L	21360403	21360482	HMS-Beagle2	7197	1	13	79	'7-6	62.68	3.2	3.1	intergenic	not near genes	chr2L_13_21360001	chr2L_21360001	0.54	RAL-535
70	chr2L	21767447	21767511	jockey	4	4988	19	64	'14-5	61.31	5.5	2.9	intron	CG31612 -	chr2L_19_21765001	chr2L_21765001	0.74	RAL-535
71	chr2L	22077712	22077761	accord	7379	1	4	49	'1-3	63.07	3.8	0.8	intergenic	not near genes	chr2L_4_22075001	chr2L_22075001	0.25	RAL-535
72	chr2L	22092980	22092995	INE-1	535	550	4	15	'2-2	58.34	1.6	1.5	intergenic	not near genes	chr2L_4_22090001	chr2L_22090001	0.50	RAL-535
73	chr2L	22747283	22747348	transib2	5	2821	8	65	'5-3	65.10	2.9	2.1	intron	CG40006 -	chr2L_8_22745001	chr2L_22745001	0.62	RAL-535
74	chr2L	22780854	22780914	HMS-Beagle2	305	6896	9	60	'5-4	63.91	1.6	3.5	intergenic	not near genes	chr2L_9_22780001	chr2L_22780001	0.56	RAL-535
75	chr2L	23232639	23232659	Doc	12	32	5	20	'2-3	61.92	0.0	5.0	intergenic	not near genes	chr2L_5_23230001	chr2L_23230001	0.40	RAL-535
76	chr2L	23295818	23295865	micropia	5411	2	5	47	'2-3	62.59	5.1	0.8	intergenic	not near genes	chr2L_5_23295001	chr2L_23295001	0.40	RAL-535
77	chr2L	23299980	23300004	invader4	3080	335	5	24	'4-1	57.19	4.5	0.9	intergenic	not near genes	chr2L_5_23295001	chr2L_23295001	0.80	RAL-535
78	chr2L	23310114	23310185	1360	2	3383	14	71	'6-8	67.92	4.9	2.4	intergenic	not near genes	chr2L_14_23310001	chr2L_23310001	0.43	RAL-535
79	chr2R	330130	330206	HMS-Beagle2	306	6883	9	76	'5-4	64.99	1.5	3.6	intergenic	not near genes	chr2R_9_330001	chr2R_330001	0.56	RAL-535
80	chr2R	1398683	1398714	Stalker2	7276	7246	8	31	'3-5	63.78	1.9	2.8	intron	l(2)41Ab +	chr2R_8_1395001	chr2R_1395001	0.38	RAL-535
81	chr2R	3146464	3146480	rover	115	7232	4	16	'3-1	57.69	3.1	1.0	intron	CG42596 +	chr2R_4_3145001	chr2R_3145001	0.75	RAL-535
82	chr2R	3594168	3594224	pogo	2100	4	4	56	'2-2	65.80	2.3	1.2	intergenic	not near genes	chr2R_4_3590001	chr2R_3590001	0.50	RAL-535
83	chr2R	3919664	3919682	1360	6	24	11	18	'8-3	57.06	7.7	1.3	intron	uex -	chr2R_11_3915001	chr2R_3915001	0.73	RAL-535
84	chr2R	4261941	4261959	invader4	3027	285	7	18	'3-4	54.59	4.0	1.4	intergenic	not near genes	chr2R_7_4260001	chr2R_4260001	0.43	RAL-535
85	chr2R	4265353	4265434	flea	4758	257	25	81	'18-7	63.79	4.6	4.5	intergenic	not near genes	chr2R_25_4265001	chr2R_4265001	0.72	RAL-535
86	chr2R	5284567	5284582	Doc4-element	2635	2620	6	15	'2-4	53.53	5.9	0.9	intron	d4 +	chr2R_6_5280001	chr2R_5280001	0.33	RAL-535
87	chr2R	5303117	5303147	FB	232	262	4	30	'3-1	63.67	0.8	2.2	intergenic	not near genes	chr2R_4_5300001	chr2R_5300001	0.75	RAL-535
88	chr2R	5466990	5467057	copia	4869	243	6	67	'4-2	64.67	2.5	1.7	intergenic	not near genes	chr2R_6_5465001	chr2R_5465001	0.67	RAL-535
89	chr2R	5674658	5674708	S-element	1705	1688	4	50	'1-3	61.92	0.8	2.2	intergenic	not near genes	chr2R_4_5670001	chr2R_5670001	0.25	RAL-535
90	chr2R	6241488	6241630	INE-1	545	156	4	142	'3-1	71.39	3.7	0.9	intergenic	not near genes	chr2R_4_6240001	chr2R_6240001	0.75	RAL-535
91	chr2R	6438352	6438371	Stalker4	399	380	5	19	'4-1	61.33	18.2	0.3	intergenic	not near genes	chr2R_5_6435001	chr2R_6435001	0.80	RAL-535
92	chr2R	6493942	6493958	pogo	6	22	4	16	'1-3	67.00	4.6	0.7	intergenic	not near genes	chr2R_4_6490001	chr2R_6490001	0.25	RAL-535
93	chr2R	6807071	6807100	diver	380	414	7	29	'4-3	64.88	1.7	2.6	intergenic	not near genes	chr2R_7_6805001	chr2R_6805001	0.57	RAL-535
94	chr2R	6823572	6823639	mdg1	7039	7446	9	67	'6-3	63.56	4.5	1.6	intergenic	not near genes	chr2R_9_6820001	chr2R_6820001	0.67	RAL-535
95	chr2R	6830670	6830737	hobo	2934	4	8	67	'2-6	69.91	5.5	1.2	intron	CG15236 +	chr2R_8_6830001	chr2R_6830001	0.25	RAL-535
96	chr2R	7123506	7123587	mdg1	421	7038	12	81	'6-6	64.66	4.6	2.1	intron	esn +	chr2R_12_7120001	chr2R_7120001	0.50	RAL-535
97	chr2R	7225903	7225969	hopper	6	1408	13	66	'6-7	63.02	3.2	3.1	intergenic	not near genes	chr2R_13_7225001	chr2R_7225001	0.46	RAL-535
98	chr2R	7541335	7541419	Tirant	402	8105	13	84	'2-11	68.18	2.5	3.7	intron	Corin +	chr2R_13_7540001	chr2R_7540001	0.15	RAL-535
99	chr2R	7565004	7565048	I-element	5342	11	9	44	'2-7	57.60	2.7	2.4	intron	CG30499 -	chr2R_9_7565001	chr2R_7565001	0.22	RAL-535
100	chr2R	7730685	7730735	roo	401	23	8	50	'6-2	64.54	3.3	1.9	intron	CG18812 -	chr2R_8_7730001	chr2R_7730001	0.75	RAL-535
101	chr2R	8642921	8642965	Doc2-element	4747	4695	6	44	'2-4	54.90	1.6	2.3	intergenic	not near genes	chr2R_6_8640001	chr2R_8640001	0.33	RAL-535
102	chr2R	8786288	8786369	HMS-Beagle	247	6797	17	81	'8-9	67.60	2.3	5.2	intergenic	not near genes	chr2R_17_8785001	chr2R_8785001	0.47	RAL-535
103	chr2R	9313580	9313657	roo	8669	410	16	77	'5-11	67.86	6.6	2.1	intron,intron	CG13739 -,CG13954 -	chr2R_16_9310001	chr2R_9310001	0.31	RAL-535
104	chr2R	9453629	9453711	roo	8663	409	13	82	'6-7	66.47	2.7	3.5	intron,intron	Camta +,CG33758 -	chr2R_13_9450001	chr2R_9450001	0.46	RAL-535
105	chr2R	9515427	9515446	jockey	4690	4670	7	19	'5-2	60.05	5.0	1.2	intron	brp +	chr2R_7_9515001	chr2R_9515001	0.71	RAL-535
106	chr2R	9549278	9549326	Juan	4198	4025	6	48	'1-5	58.89	1.7	2.2	intergenic	not near genes	chr2R_6_9545001	chr2R_9545001	0.17	RAL-535
107	chr2R	9870952	9871035	roo	8664	411	14	83	'4-10	66.81	2.0	4.7	intron	cbx -	chr2R_14_9870001	chr2R_9870001	0.29	RAL-535
108	chr2R	9952284	9952307	F-element	331	308	11	23	'5-6	63.99	2.9	2.8	intron	Mef2 -	chr2R_11_9950001	chr2R_9950001	0.45	RAL-535
109	chr2R	11168945	11169003	roo	8664	9049	11	58	'7-4	71.25	4.1	2.2	intron,intron	CG13229 -,shn +	chr2R_11_11165001	chr2R_11165001	0.64	RAL-535
110	chr2R	11491821	11491845	Doc	13	37	12	24	'8-4	59.32	8.9	1.2	intron	inv +	chr2R_12_11490001	chr2R_11490001	0.67	RAL-535
111	chr2R	11959749	11959808	copia	240	6	8	59	'2-6	60.86	5.5	1.2	intron	CG13188 +	chr2R_8_11955001	chr2R_11955001	0.25	RAL-535
112	chr2R	12060665	12060735	hobo	1	2932	14	70	'10-4	65.03	6.8	1.8	intron	Drep-3 +	chr2R_14_12060001	chr2R_12060001	0.71	RAL-535
113	chr2R	12139929	12140004	hobo	2709	5	12	75	'5-7	64.86	4.6	2.1	intron	skpB -	chr2R_12_12135001	chr2R_12135001	0.42	RAL-535
114	chr2R	12185329	12185380	accord	7381	28	9	51	'6-3	64.34	9.3	0.9	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_9_12185001	chr2R_12185001	0.67	RAL-535
115	chr2R	12336625	12336645	pogo	31	11	8	20	'5-3	66.90	4.5	1.5	intergenic	CG34021 +,CG8490 +	chr2R_8_12335001	chr2R_12335001	0.62	RAL-535
116	chr2R	13430179	13430252	Tc3	308	311	6	73	'2-4	61.35	5.8	0.9	intron	CG42321 -	chr2R_6_13430001	chr2R_13430001	0.33	RAL-535
117	chr2R	13541541	13541575	jockey	4691	4669	12	34	'6-6	67.79	2.9	3.1	intron	CG6145 -	chr2R_12_13540001	chr2R_13540001	0.50	RAL-535
118	chr2R	13644288	13644312	hobo	6	32	7	24	'3-4	68.66	8.9	0.7	intron	fas +	chr2R_7_13640001	chr2R_13640001	0.43	RAL-535
119	chr2R	13686641	13686705	1360	6	3380	15	64	'7-8	68.62	4.0	3.0	intron	fas +	chr2R_15_13685001	chr2R_13685001	0.47	RAL-535
120	chr2R	13787433	13787512	3S18	5768	342	14	79	'10-4	59.30	2.6	3.9	3` UTR	Cpr50Ca +	chr2R_14_13785001	chr2R_13785001	0.71	RAL-535
121	chr2R	13799426	13799499	blood	5	377	23	73	'10-13	63.60	3.3	5.3	intron	Cpr50Cb +	chr2R_23_13795001	chr2R_13795001	0.43	RAL-535
122	chr2R	13894573	13894651	mdg3	5249	243	13	78	'10-3	69.44	3.4	3.0	exon	shot -	chr2R_13_13890001	chr2R_13890001	0.77	RAL-535
123	chr2R	13962058	13962122	pogo	5	2097	10	64	'5-5	61.95	1.0	5.0	intron	Cp1 +	chr2R_10_13960001	chr2R_13960001	0.50	RAL-535
124	chr2R	14027168	14027213	hopper	1407	24	10	45	'7-3	68.45	4.9	1.7	intron	mam +	chr2R_10_14025001	chr2R_14025001	0.70	RAL-535
125	chr2R	14028184	14028233	hopper	30	1414	17	49	'7-10	66.01	1.5	6.8	intron	mam +	chr2R_17_14025001	chr2R_14025001	0.41	RAL-535
126	chr2R	14247284	14247354	1360	3388	8	17	70	'12-5	67.73	4.7	3.0	intron	Mdr50 +	chr2R_17_14245001	chr2R_14245001	0.71	RAL-535
127	chr2R	14268108	14268184	copia	254	3	8	76	'5-3	68.00	5.2	1.3	intergenic	CG8547 -	chr2R_8_14265001	chr2R_14265001	0.62	RAL-535
128	chr2R	14604474	14604547	blood	7382	7012	15	73	'7-8	67.83	3.6	3.3	intergenic	CG12868 -,tra2 -	chr2R_15_14600001	chr2R_14600001	0.47	RAL-535
129	chr2R	14637357	14637433	roo	409	5	20	76	'8-12	65.79	4.5	3.6	intergenic	not near genes	chr2R_20_14635001	chr2R_14635001	0.40	RAL-535
130	chr2R	14732388	14732463	roo	405	8663	16	75	'9-7	66.71	1.8	5.7	intergenic	not near genes	chr2R_16_14730001	chr2R_14730001	0.56	RAL-535
131	chr2R	14883987	14884053	mdg3	240	5251	9	66	'3-6	63.53	2.4	2.6	3` UTR	Cyp6a20 +	chr2R_9_14880001	chr2R_14880001	0.33	RAL-535
132	chr2R	15354907	15354932	G2	282	257	13	25	'7-6	60.00	6.2	1.8	intron	unc-5 +	chr2R_13_15350001	chr2R_15350001	0.54	RAL-535
133	chr2R	15897536	15897613	roo	8673	169	22	77	'15-7	66.14	5.0	3.7	intron	sli -	chr2R_22_15895001	chr2R_15895001	0.68	RAL-535
134	chr2R	16065134	16065202	roo	3	399	15	68	'7-8	66.15	2.5	4.3	intergenic	mir-137 -	chr2R_15_16065001	chr2R_16065001	0.47	RAL-535
135	chr2R	16128597	16128681	Tirant	404	8111	20	84	'12-8	67.98	3.8	4.2	intron	spin +	chr2R_20_16125001	chr2R_16125001	0.60	RAL-535
136	chr2R	16889912	16890121	roo	9	347	24	209	'23-1	64.79	4.4	4.4	intron	CG8910 -	chr2R_24_16885001	chr2R_16885001	0.96	RAL-535
137	chr2R	17126337	17126416	roo	410	8666	11	79	'4-7	63.61	2.8	2.9	3` UTR	Amy-d +	chr2R_11_17125001	chr2R_17125001	0.36	RAL-535
138	chr2R	17686908	17686983	1360	1	3	23	75	'17-6	64.49	6.0	3.3	intron	HPS4 +	chr2R_23_17685001	chr2R_17685001	0.74	RAL-535
139	chr2R	17691651	17691726	1360	3388	3386	30	75	'10-20	68.30	4.9	5.1	intron	swi2 -	chr2R_30_17690001	chr2R_17690001	0.33	RAL-535
140	chr2R	17718325	17718401	McClintock	1	6427	9	76	'8-1	71.20	2.4	2.6	intron	CG6424 -	chr2R_9_17715001	chr2R_17715001	0.89	RAL-535
141	chr2R	17880155	17880209	pogo	23	2096	7	54	'1-6	64.36	1.6	2.7	intron	Elk +	chr2R_7_17880001	chr2R_17880001	0.14	RAL-535
142	chr2R	17883082	17883154	roo	410	10	8	72	'3-5	69.31	2.1	2.6	intron	Elk +	chr2R_8_17880001	chr2R_17880001	0.38	RAL-535
143	chr2R	17913148	17913218	3S18	3	333	9	70	'6-3	64.44	3.4	2.0	intron	Elk +	chr2R_9_17910001	chr2R_17910001	0.67	RAL-535
144	chr2R	18372599	18372629	jockey	4666	4696	11	30	'6-5	63.84	0.0	11.0	intergenic	not near genes	chr2R_11_18370001	chr2R_18370001	0.55	RAL-535
145	chr2R	18402337	18402390	1360	15	3379	11	53	'5-6	67.04	7.1	1.4	intergenic	not near genes	chr2R_11_18400001	chr2R_18400001	0.45	RAL-535
146	chr2R	18802661	18802683	P-element	10	2851	6	22	'3-3	46.46	6.3	0.8	5` UTR	l(2)08717 -	chr2R_6_18800001	chr2R_18800001	0.50	RAL-535
147	chr2R	18864830	18864894	blood	7377	5	12	64	'4-8	66.67	1.6	4.6	3` UTR	CG43071 -	chr2R_12_18860001	chr2R_18860001	0.33	RAL-535
148	chr2R	19330282	19330357	McClintock	5959	479	9	75	'6-3	64.55	2.9	2.3	intron	Rgk1 -	chr2R_9_19330001	chr2R_19330001	0.67	RAL-535
149	chr2R	19648068	19648150	opus	7113	495	10	82	'4-6	65.35	4.7	1.8	intergenic	CG15905 -	chr2R_10_19645001	chr2R_19645001	0.40	RAL-535
150	chr2R	19838332	19838378	springer	13	379	12	46	'8-4	65.96	5.7	1.8	intergenic	not near genes	chr2R_12_19835001	chr2R_19835001	0.67	RAL-535
151	chr2R	20532875	20532953	412	495	4	15	78	'6-9	61.01	3.6	3.3	5` UTR	CR44651 +	chr2R_15_20530001	chr2R_20530001	0.40	RAL-535
152	chr2R	21074076	21074142	P-element	2886	2876	18	66	'13-5	52.48	5.2	2.9	5` UTR	Treh +	chr2R_18_21070001	chr2R_21070001	0.72	RAL-535
153	chr2R	21097609	21097685	297	6586	6974	5	76	'3-2	64.60	1.5	2.0	intron	CG34396 +	chr2R_5_21095001	chr2R_21095001	0.60	RAL-535
154	chr2R	21471124	21471199	copia	250	4868	7	75	'3-4	65.66	2.3	2.1	intron	Sdc -	chr2R_7_21470001	chr2R_21470001	0.43	RAL-535
155	chr2R	21564264	21564307	roo	8692	404	13	43	'2-11	65.93	4.5	2.4	intron	CG10440 -	chr2R_13_21560001	chr2R_21560001	0.15	RAL-535
156	chr2R	22270412	22270455	Tirant	8484	11	13	43	'7-6	67.05	6.1	1.8	intron	dve +	chr2R_13_22270001	chr2R_22270001	0.54	RAL-535
157	chr2R	22378426	22378496	opus	10	496	10	70	'4-6	70.36	2.9	2.6	3` UTR,3` UTR	Rtf1 +,CR45327 -	chr2R_10_22375001	chr2R_22375001	0.40	RAL-535
158	chr2R	22465149	22465174	hobo	2	26	10	25	'7-3	61.41	6.6	1.3	intron	CG10384 +	chr2R_10_22465001	chr2R_22465001	0.70	RAL-535
159	chr2R	22542015	22542092	opus	113	498	18	77	'5-13	67.11	2.5	5.1	intron	px -	chr2R_18_22540001	chr2R_22540001	0.28	RAL-535
160	chr2R	22553735	22553817	roo	9071	8663	12	82	'7-5	71.41	1.3	5.2	intron	px -	chr2R_12_22550001	chr2R_22550001	0.58	RAL-535
161	chr2R	22768498	22768516	jockey	16	16	8	18	'3-5	59.56	10.2	0.7	intron	CG42260 -	chr2R_8_22765001	chr2R_22765001	0.38	RAL-535
162	chr2R	22906921	22906952	F-element	13	43	6	31	'3-3	65.62	4.4	1.1	intron	nahoda +	chr2R_6_22905001	chr2R_22905001	0.50	RAL-535
163	chr2R	22968122	22968193	blood	7381	2	15	71	'8-7	60.88	4.6	2.7	intergenic	not near genes	chr2R_15_22965001	chr2R_22965001	0.53	RAL-535
164	chr2R	23650473	23650553	HMS-Beagle	244	6795	13	80	'4-9	65.98	2.8	3.4	intron	retn +	chr2R_13_23650001	chr2R_23650001	0.31	RAL-535
165	chr2R	23799516	23799583	roo	8666	9060	19	67	'8-11	62.89	4.5	3.5	intergenic	not near genes	chr2R_19_23795001	chr2R_23795001	0.42	RAL-535
166	chr2R	24021566	24021595	pogo	3	30	6	29	'2-4	70.17	7.2	0.7	intron	CG3907 -	chr2R_6_24020001	chr2R_24020001	0.33	RAL-535
167	chr2R	24132665	24132714	pogo	13	2084	7	49	'4-3	67.68	5.4	1.1	intron	tamo -	chr2R_7_24130001	chr2R_24130001	0.57	RAL-535
168	chr2R	24290700	24290772	hobo	2	2936	11	72	'8-3	69.14	3.8	2.3	3` UTR	nvy +	chr2R_11_24290001	chr2R_24290001	0.73	RAL-535
169	chr3L	1072687	1072702	Doc	7	38	4	15	'1-3	74.76	0.4	2.9	intron	bab1 -	chr3L_4_1070001	chr3L_1070001	0.25	RAL-535
170	chr3L	1282651	1282714	mdg1	7052	417	9	63	'5-4	58.90	3.7	1.9	intron	CG32333 +	chr3L_9_1280001	chr3L_1280001	0.56	RAL-535
171	chr3L	1628466	1628498	P-element	25	2886	5	32	'2-3	55.18	5.5	0.8	intron	GC -	chr3L_5_1625001	chr3L_1625001	0.40	RAL-535
172	chr3L	1688731	1688799	P-element	2879	2	16	68	'8-8	48.26	3.0	4.0	intron	CG7991 +	chr3L_16_1685001	chr3L_1685001	0.50	RAL-535
173	chr3L	2219851	2219875	opus	7145	5	5	24	'4-1	72.45	4.1	1.0	intergenic	not near genes	chr3L_5_2215001	chr3L_2215001	0.80	RAL-535
174	chr3L	3139543	3139611	roo	8668	401	16	68	'8-8	66.94	5.4	2.5	intron	CG11537 -	chr3L_16_3135001	chr3L_3135001	0.50	RAL-535
175	chr3L	3392085	3392163	mdg1	7457	7039	6	78	'3-3	65.87	3.0	1.5	intergenic	not near genes	chr3L_6_3390001	chr3L_3390001	0.50	RAL-535
176	chr3L	3540140	3540210	mdg3	236	5250	8	70	'2-6	63.71	3.7	1.7	intron	Eip63E +	chr3L_8_3540001	chr3L_3540001	0.25	RAL-535
177	chr3L	3965040	3965068	hobo	8	35	7	28	'4-3	65.57	5.6	1.1	intergenic	CG12605 -	chr3L_7_3965001	chr3L_3965001	0.57	RAL-535
178	chr3L	4239386	4239433	jockey	4671	4989	9	47	'3-6	52.21	2.6	2.5	intergenic	not near genes	chr3L_9_4235001	chr3L_4235001	0.33	RAL-535
179	chr3L	4468478	4468553	pogo	2099	7	10	75	'4-6	67.17	4.6	1.8	intergenic	not near genes	chr3L_10_4465001	chr3L_4465001	0.40	RAL-535
180	chr3L	4475049	4475112	jockey	4980	7	12	63	'2-10	65.14	4.5	2.2	3` UTR	CG11349 +	chr3L_12_4475001	chr3L_4475001	0.17	RAL-535
181	chr3L	4650796	4650844	roo	406	8694	14	48	'11-3	65.59	4.6	2.5	intron	axo -	chr3L_14_4650001	chr3L_4650001	0.79	RAL-535
182	chr3L	4740701	4740772	roo	409	8674	17	71	'9-8	64.25	4.6	3.0	intron	RhoGEF64C +	chr3L_17_4740001	chr3L_4740001	0.53	RAL-535
183	chr3L	5221771	5221845	mdg1	7041	7456	8	74	'5-3	65.38	3.7	1.7	intron	shep -	chr3L_8_5220001	chr3L_5220001	0.62	RAL-535
184	chr3L	5438752	5438819	hopper	1403	2	15	67	'5-10	61.23	4.2	2.9	intron	CG34391 +	chr3L_15_5435001	chr3L_5435001	0.33	RAL-535
185	chr3L	5998132	5998210	HMS-Beagle	6797	243	22	78	'17-5	66.22	4.0	4.4	intron	PVRAP +	chr3L_22_5995001	chr3L_5995001	0.77	RAL-535
186	chr3L	6094502	6094578	S-element	1712	1715	9	76	'7-2	73.77	3.0	2.2	5` UTR	CG10467 -	chr3L_9_6090001	chr3L_6090001	0.78	RAL-535
187	chr3L	6285662	6285718	P-element	2884	2870	7	56	'3-4	47.31	5.9	1.0	intergenic	not near genes	chr3L_7_6285001	chr3L_6285001	0.43	RAL-535
188	chr3L	6501009	6501081	pogo	2100	2	10	72	'5-5	66.31	3.0	2.5	intron	sfl +	chr3L_10_6500001	chr3L_6500001	0.50	RAL-535
189	chr3L	6620578	6620605	accord	7038	193	4	27	'2-2	58.75	10.8	0.3	intergenic	not near genes	chr3L_4_6620001	chr3L_6620001	0.50	RAL-535
190	chr3L	7071274	7071336	mdg3	244	5269	6	62	'4-2	63.24	3.4	1.4	intron	CG8641 -	chr3L_6_7070001	chr3L_7070001	0.67	RAL-535
191	chr3L	7425217	7425298	HMS-Beagle	246	1	12	81	'5-7	66.75	1.7	4.4	intron	CG42458 +	chr3L_12_7425001	chr3L_7425001	0.42	RAL-535
192	chr3L	7485505	7485584	blood	2	377	10	79	'6-4	63.64	6.9	1.3	intergenic	mthl6 +	chr3L_10_7485001	chr3L_7485001	0.60	RAL-535
193	chr3L	7849287	7849306	jockey	4672	4684	5	19	'2-3	61.31	11.1	0.4	intron	Pdp1 -	chr3L_5_7845001	chr3L_7845001	0.40	RAL-535
194	chr3L	8710900	8710956	jockey	4688	4979	5	56	'4-1	60.06	4.4	0.9	intergenic	not near genes	chr3L_5_8710001	chr3L_8710001	0.80	RAL-535
195	chr3L	8714646	8714697	hobo	6	2933	12	51	'10-2	63.99	5.7	1.8	intergenic	not near genes	chr3L_12_8710001	chr3L_8710001	0.83	RAL-535
196	chr3L	9267162	9267226	hobo	2929	3	10	64	'2-8	59.89	3.1	2.4	exon	GluRIB +	chr3L_10_9265001	chr3L_9265001	0.20	RAL-535
197	chr3L	9334541	9334624	roo	410	8662	13	83	'8-5	68.12	2.7	3.5	intron	PGRP-LA +	chr3L_13_9330001	chr3L_9330001	0.62	RAL-535
198	chr3L	9426670	9426736	P-element	5	2881	17	66	'7-10	43.64	4.9	2.9	5` UTR	CG3967 -	chr3L_17_9425001	chr3L_9425001	0.41	RAL-535
199	chr3L	10109762	10109784	hobo	6	30	8	22	'2-6	65.94	9.7	0.7	intron	dpr6 +	chr3L_8_10105001	chr3L_10105001	0.25	RAL-535
200	chr3L	10666661	10666749	Tirant	403	8107	8	88	'1-7	66.91	5.0	1.3	intron	simj +	chr3L_8_10665001	chr3L_10665001	0.12	RAL-535
201	chr3L	11118424	11118445	jockey	4766	4787	8	21	'5-3	59.87	2.0	2.7	intron	fd68A -	chr3L_8_11115001	chr3L_11115001	0.62	RAL-535
202	chr3L	11125406	11125462	pogo	21	2094	7	56	'4-3	73.12	0.6	4.4	intron	CG42575 +	chr3L_7_11125001	chr3L_11125001	0.57	RAL-535
203	chr3L	11187853	11187906	jockey	36	4979	10	53	'3-7	59.23	4.1	2.0	intron	GlcAT-P -	chr3L_10_11185001	chr3L_11185001	0.30	RAL-535
204	chr3L	11754347	11754368	Quasimodo	21	1	5	21	'4-1	67.44	3.4	1.1	intron	CG6024 -	chr3L_5_11750001	chr3L_11750001	0.80	RAL-535
205	chr3L	11967316	11967368	opus	24	496	7	52	'2-5	73.10	0.2	5.8	intergenic	Muc68E -	chr3L_7_11965001	chr3L_11965001	0.29	RAL-535
206	chr3L	12301212	12301265	hopper	26	1413	13	53	'4-9	62.74	3.9	2.7	5` UTR	CR44550 +	chr3L_13_12300001	chr3L_12300001	0.31	RAL-535
207	chr3L	12863688	12863769	Transpac	1	311	19	81	'7-12	69.34	4.6	3.4	intergenic	not near genes	chr3L_19_12860001	chr3L_12860001	0.37	RAL-535
208	chr3L	13144954	13145028	Tirant	8110	392	5	74	'1-4	61.91	1.1	2.4	intergenic	not near genes	chr3L_5_13140001	chr3L_13140001	0.20	RAL-535
209	chr3L	13220462	13220479	Doc	34	13	9	17	'3-6	60.76	3.8	1.9	intergenic	not near genes	chr3L_9_13220001	chr3L_13220001	0.33	RAL-535
210	chr3L	13304032	13304106	Stalker2	7253	401	10	74	'3-7	62.10	2.8	2.6	intergenic	CR44555 +	chr3L_10_13300001	chr3L_13300001	0.30	RAL-535
211	chr3L	13338532	13338585	springer	27	382	6	53	'1-5	69.56	2.6	1.7	intergenic	not near genes	chr3L_6_13335001	chr3L_13335001	0.17	RAL-535
212	chr3L	13454215	13454279	blood	7012	7381	5	64	'2-3	60.00	1.4	2.1	intron	CG10738 +	chr3L_5_13450001	chr3L_13450001	0.40	RAL-535
213	chr3L	13474117	13474195	springer	7138	383	13	78	'8-5	54.80	3.1	3.2	intron	CG10089 -	chr3L_13_13470001	chr3L_13470001	0.62	RAL-535
214	chr3L	13552160	13552201	hobo	2932	7	8	41	'3-5	66.62	0.9	4.2	intron	bru-3 -	chr3L_8_13550001	chr3L_13550001	0.38	RAL-535
215	chr3L	13714322	13714401	flea	4755	5010	13	79	'11-2	67.03	4.6	2.3	intron	bru-3 -	chr3L_13_13710001	chr3L_13710001	0.85	RAL-535
216	chr3L	13887880	13887916	hobo	2934	10	7	36	'2-5	60.20	6.1	1.0	intron	dysc -	chr3L_7_13885001	chr3L_13885001	0.29	RAL-535
217	chr3L	13948410	13948472	Burdock	234	6134	12	62	'2-10	68.31	2.3	3.6	intron	CG32137 +	chr3L_12_13945001	chr3L_13945001	0.17	RAL-535
218	chr3L	14221020	14221102	Burdock	256	6136	14	82	'7-7	67.65	7.7	1.6	intron	nuf +	chr3L_14_14220001	chr3L_14220001	0.50	RAL-535
219	chr3L	14359133	14359195	Tirant	9	388	9	62	'3-6	58.84	5.6	1.4	intron	fz +	chr3L_9_14355001	chr3L_14355001	0.33	RAL-535
220	chr3L	14551079	14551108	pogo	2099	2089	11	29	'6-5	64.93	4.6	2.0	intergenic	CG9238 -	chr3L_11_14550001	chr3L_14550001	0.55	RAL-535
221	chr3L	14603272	14603303	jockey	5	35	17	31	'7-10	62.31	1.9	5.9	intergenic	not near genes	chr3L_17_14600001	chr3L_14600001	0.41	RAL-535
222	chr3L	14822850	14822914	mdg1	7447	7043	6	64	'4-2	60.32	2.6	1.7	intron	CG17839 +	chr3L_6_14820001	chr3L_14820001	0.67	RAL-535
223	chr3L	14948863	14948913	roo	8696	410	11	50	'7-4	76.90	0.8	6.1	intergenic	not near genes	chr3L_11_14945001	chr3L_14945001	0.64	RAL-535
224	chr3L	15035142	15035195	pogo	2085	14	14	53	'6-8	72.08	3.6	3.0	intron	Sytbeta -	chr3L_14_15035001	chr3L_15035001	0.43	RAL-535
225	chr3L	15047473	15047525	hobo	3	2923	12	52	'10-2	62.84	4.6	2.1	intron	Sytbeta -	chr3L_12_15045001	chr3L_15045001	0.83	RAL-535
226	chr3L	15146438	15146485	Tabor	6852	464	6	47	'4-2	60.45	1.5	2.4	intergenic	Pex3 +	chr3L_6_15145001	chr3L_15145001	0.67	RAL-535
227	chr3L	16501169	16501257	Stalker2	7248	398	4	88	'3-1	62.18	0.9	2.1	intron	CG43373 -	chr3L_4_16500001	chr3L_16500001	0.75	RAL-535
228	chr3L	17503193	17503218	pogo	25	2	5	25	'2-3	66.05	1.6	1.9	intron	Oatp74D +	chr3L_5_17500001	chr3L_17500001	0.40	RAL-535
229	chr3L	18099096	18099142	pogo	5	2076	5	46	'3-2	66.82	0.2	4.2	intron	CG13698 -	chr3L_5_18095001	chr3L_18095001	0.60	RAL-535
230	chr3L	18228355	18228423	Bari1	11	1702	6	68	'3-3	62.94	2.1	1.9	intergenic	not near genes	chr3L_6_18225001	chr3L_18225001	0.50	RAL-535
231	chr3L	18463346	18463361	1360	146	132	5	15	'2-3	53.99	3.2	1.2	intergenic	CG4306 -	chr3L_5_18460001	chr3L_18460001	0.40	RAL-535
232	chr3L	18701003	18701074	Transpac	4927	308	13	71	'4-9	65.11	4.0	2.6	intergenic	not near genes	chr3L_13_18700001	chr3L_18700001	0.31	RAL-535
233	chr3L	19274805	19274878	transib2	6	2822	12	73	'5-7	61.97	2.8	3.2	intergenic	not near genes	chr3L_12_19270001	chr3L_19270001	0.42	RAL-535
234	chr3L	19349943	19349994	1360	2	3204	9	51	'4-5	62.29	5.9	1.3	intron	CG32206 -	chr3L_9_19345001	chr3L_19345001	0.44	RAL-535
235	chr3L	19463624	19463648	I-element	1	25	7	24	'6-1	59.43	3.5	1.6	intergenic	CG14095 -	chr3L_7_19460001	chr3L_19460001	0.86	RAL-535
236	chr3L	19503110	19503182	roo	8669	407	12	72	'3-9	63.58	1.6	4.6	intron	CG9452 -	chr3L_12_19500001	chr3L_19500001	0.25	RAL-535
237	chr3L	19789012	19789091	Transpac	5228	1	26	79	'10-16	63.86	4.3	4.9	intron,intron	CG42637 -,Gyc76C -	chr3L_26_19785001	chr3L_19785001	0.38	RAL-535
238	chr3L	20038530	20038563	G2	2630	2664	9	33	'4-5	64.88	2.4	2.6	intergenic	not near genes	chr3L_9_20035001	chr3L_20035001	0.44	RAL-535
239	chr3L	20039840	20039863	Doc	27	4	5	23	'3-2	59.88	3.3	1.2	intergenic	not near genes	chr3L_5_20035001	chr3L_20035001	0.60	RAL-535
240	chr3L	20192474	20192523	Tabor	7301	9	8	49	'4-4	63.48	1.2	3.6	intron	CG42674 -	chr3L_8_20190001	chr3L_20190001	0.50	RAL-535
241	chr3L	21039422	21039498	roo	5	409	12	76	'6-6	68.03	5.9	1.7	intron	siz +	chr3L_12_21035001	chr3L_21035001	0.50	RAL-535
242	chr3L	21052733	21052780	copia	230	4868	4	47	'2-2	71.69	2.4	1.2	intron	siz +	chr3L_4_21050001	chr3L_21050001	0.50	RAL-535
243	chr3L	21157997	21158071	roo	413	8663	12	74	'1-11	68.01	1.4	5.0	intron	Ac78C -	chr3L_12_21155001	chr3L_21155001	0.08	RAL-535
244	chr3L	21321832	21321901	hopper	1411	7	7	69	'2-5	62.60	2.4	2.1	intron	Rab26 +	chr3L_7_21320001	chr3L_21320001	0.29	RAL-535
245	chr3L	21501157	21501173	1360	15	31	11	16	'7-4	71.95	6.9	1.4	intron	Glg1 -	chr3L_11_21500001	chr3L_21500001	0.64	RAL-535
246	chr3L	21898826	21898888	hopper	1409	1402	13	62	'5-8	64.86	4.4	2.4	intron	mub +	chr3L_13_21895001	chr3L_21895001	0.38	RAL-535
247	chr3L	22108107	22108166	Transpac	291	3	14	59	'4-10	66.19	4.6	2.5	intergenic	not near genes	chr3L_14_22105001	chr3L_22105001	0.29	RAL-535
248	chr3L	22137415	22137486	blood	378	11	15	71	'13-2	61.19	3.7	3.2	intron	olf413 +	chr3L_15_22135001	chr3L_22135001	0.87	RAL-535
249	chr3L	22216653	22216721	roo	396	8664	9	68	'2-7	64.15	5.9	1.3	intron	olf413 +	chr3L_9_22215001	chr3L_22215001	0.22	RAL-535
250	chr3L	22399751	22399804	FB	17	6	12	53	'3-9	62.76	3.9	2.4	intron	Ten-m -	chr3L_12_22395001	chr3L_22395001	0.25	RAL-535
251	chr3L	22572316	22572384	roo	403	4	11	68	'3-8	68.54	3.1	2.7	intergenic	not near genes	chr3L_11_22570001	chr3L_22570001	0.27	RAL-535
252	chr3L	22615230	22615298	hobo	6	2709	7	68	'2-5	64.22	4.6	1.2	intron	CG14459 -	chr3L_7_22615001	chr3L_22615001	0.29	RAL-535
253	chr3L	22681126	22681148	jockey	4674	4696	4	22	'1-3	61.98	11.0	0.3	intergenic	not near genes	chr3L_4_22680001	chr3L_22680001	0.25	RAL-535
254	chr3L	23146485	23146521	1360	4	39	17	36	'8-9	67.71	8.4	1.8	intergenic	not near genes	chr3L_17_23145001	chr3L_23145001	0.47	RAL-535
255	chr3L	23236502	23236585	Stalker2	402	7244	15	83	'5-10	63.95	4.4	2.8	intron	nAChRalpha4 +	chr3L_15_23235001	chr3L_23235001	0.33	RAL-535
256	chr3L	23689956	23690019	roo	8671	398	11	63	'7-4	63.46	2.4	3.2	intergenic	AGO3 +	chr3L_11_23685001	chr3L_23685001	0.64	RAL-535
257	chr3L	24120327	24120380	G5A	2441	2440	5	53	'4-1	67.31	5.3	0.8	intron	Snap25 +	chr3L_5_24120001	chr3L_24120001	0.80	RAL-535
258	chr3L	24153199	24153248	Tabor	487	15	7	49	'4-3	63.25	2.7	1.9	intron	Snap25 +	chr3L_7_24150001	chr3L_24150001	0.57	RAL-535
259	chr3L	25162595	25162643	1360	17	9	4	48	'3-1	65.75	5.9	0.6	intergenic	not near genes	chr3L_4_25160001	chr3L_25160001	0.75	RAL-535
260	chr3L	25455115	25455166	HMS-Beagle2	4	7168	9	51	'7-2	64.13	3.0	2.2	intergenic	not near genes	chr3L_9_25455001	chr3L_25455001	0.78	RAL-535
261	chr3L	25752814	25752871	Transpac	23	5227	9	57	'2-7	67.53	1.9	3.1	intergenic	CG17374 -	chr3L_9_25750001	chr3L_25750001	0.22	RAL-535
262	chr3L	25783533	25783552	F-element	60	41	4	19	'1-3	60.37	3.9	0.8	intergenic	not near genes	chr3L_4_25780001	chr3L_25780001	0.25	RAL-535
263	chr3R	433125	433143	1731	298	316	8	18	'5-3	61.93	2.9	2.1	intergenic	not near genes	chr3R_8_430001	chr3R_430001	0.62	RAL-535
264	chr3R	459999	460083	roo	8663	410	8	84	'4-4	68.24	1.4	3.3	intergenic	not near genes	chr3R_8_455001	chr3R_455001	0.50	RAL-535
265	chr3R	902579	902597	R1A1-element	5307	5325	7	18	'2-5	58.30	4.8	1.2	intron	CG42621 +	chr3R_7_900001	chr3R_900001	0.29	RAL-535
266	chr3R	3745006	3745084	412	7546	3	17	78	'9-8	63.82	3.6	3.7	exon	Tim17b +	chr3R_17_3745001	chr3R_3745001	0.53	RAL-535
267	chr3R	4553275	4553397	Juan	14	4	11	122	'1-10	62.25	1.7	4.1	intron	CG34357 -	chr3R_11_4550001	chr3R_4550001	0.09	RAL-535
268	chr3R	4554328	4554379	Bari1	1706	10	6	51	'2-4	66.60	3.4	1.4	intron	CG34357 -	chr3R_6_4550001	chr3R_4550001	0.33	RAL-535
269	chr3R	4740380	4740443	P-element	2	10	7	63	'3-4	46.53	5.8	1.0	intron	tacc -	chr3R_7_4740001	chr3R_4740001	0.43	RAL-535
270	chr3R	5765343	5765407	17.6	490	6942	4	64	'3-1	67.19	5.7	0.6	intron	CG2082 -	chr3R_4_5765001	chr3R_5765001	0.75	RAL-535
271	chr3R	6423853	6423922	1360	3385	3387	28	69	'7-21	63.52	4.7	4.9	intron	gpp +	chr3R_28_6420001	chr3R_6420001	0.25	RAL-535
272	chr3R	6804228	6804306	Transpac	310	4923	18	78	'7-11	67.17	4.0	3.6	intergenic	not near genes	chr3R_18_6800001	chr3R_6800001	0.39	RAL-535
273	chr3R	7254704	7254775	roo	4	405	22	71	'9-13	63.03	3.4	5.0	intron	Gld -	chr3R_22_7250001	chr3R_7250001	0.41	RAL-535
274	chr3R	7416567	7416636	Tirant	405	6	8	69	'2-6	70.93	2.0	2.7	intergenic	not near genes	chr3R_8_7415001	chr3R_7415001	0.25	RAL-535
275	chr3R	7527111	7527188	roo	410	3	19	77	'15-4	67.74	5.0	3.2	intron	alpha-Est6 -	chr3R_19_7525001	chr3R_7525001	0.79	RAL-535
276	chr3R	8389660	8389732	pogo	9	2098	7	72	'2-5	66.57	3.5	1.6	intron	CG45263 -	chr3R_7_8385001	chr3R_8385001	0.29	RAL-535
277	chr3R	8850933	8851012	roo	410	8666	16	79	'6-10	69.29	5.6	2.4	intron	pyd -	chr3R_16_8850001	chr3R_8850001	0.38	RAL-535
278	chr3R	9029203	9029269	FB	1	9	11	66	'4-7	65.04	4.0	2.2	intron	neur -	chr3R_11_9025001	chr3R_9025001	0.36	RAL-535
279	chr3R	9147852	9147924	Tabor	7324	6848	9	72	'3-6	59.75	5.7	1.3	intron	pum -	chr3R_9_9145001	chr3R_9145001	0.33	RAL-535
280	chr3R	10908101	10908183	roo	8662	9071	20	82	'9-11	69.00	2.4	5.9	intergenic	not near genes	chr3R_20_10905001	chr3R_10905001	0.45	RAL-535
281	chr3R	10965762	10965836	roo	407	8667	11	74	'3-8	69.10	3.4	2.5	intergenic	not near genes	chr3R_11_10965001	chr3R_10965001	0.27	RAL-535
282	chr3R	11062684	11062712	I-element	1	29	6	28	'4-2	65.03	3.5	1.3	intergenic	not near genes	chr3R_6_11060001	chr3R_11060001	0.67	RAL-535
283	chr3R	11090072	11090093	BS	2	23	8	21	'3-5	62.49	3.4	1.8	intergenic	not near genes	chr3R_8_11090001	chr3R_11090001	0.38	RAL-535
284	chr3R	11104661	11104683	Doc	5	24	9	22	'4-5	62.55	5.7	1.3	intergenic	not near genes	chr3R_9_11100001	chr3R_11100001	0.44	RAL-535
285	chr3R	11568629	11568648	BS	4818	5073	8	19	'6-2	70.83	4.3	1.5	intergenic	not near genes	chr3R_8_11565001	chr3R_11565001	0.75	RAL-535
286	chr3R	12186714	12186797	Transpac	4918	310	11	83	'2-9	69.91	4.2	2.1	intergenic	not near genes	chr3R_11_12185001	chr3R_12185001	0.18	RAL-535
287	chr3R	12534525	12534578	Stalker4	6965	400	5	53	'3-2	65.31	5.5	0.8	intron	Octbeta3R -	chr3R_5_12530001	chr3R_12530001	0.60	RAL-535
288	chr3R	12783596	12783668	roo	406	5	12	72	'6-6	65.33	3.9	2.4	intergenic	beat-Vc -	chr3R_12_12780001	chr3R_12780001	0.50	RAL-535
289	chr3R	12810441	12810519	Burdock	6134	6389	16	78	'9-7	66.43	3.3	3.7	intergenic	not near genes	chr3R_16_12810001	chr3R_12810001	0.56	RAL-535
290	chr3R	13481179	13481239	roo	396	8	8	60	'2-6	62.90	1.4	3.3	intergenic	not near genes	chr3R_8_13480001	chr3R_13480001	0.25	RAL-535
291	chr3R	13503007	13503055	hopper	25	1408	8	48	'2-6	59.12	3.0	2.0	intergenic	not near genes	chr3R_8_13500001	chr3R_13500001	0.25	RAL-535
292	chr3R	13543904	13543947	1360	24	3	5	43	'3-2	73.79	1.6	1.9	intergenic	CG31337 -	chr3R_5_13540001	chr3R_13540001	0.60	RAL-535
293	chr3R	13580448	13580530	roo	8663	409	18	82	'7-11	71.19	3.4	4.1	intergenic	not near genes	chr3R_18_13580001	chr3R_13580001	0.39	RAL-535
294	chr3R	13667198	13667266	S-element	1703	1713	7	68	'1-6	66.41	0.3	5.4	3` UTR	Task6 -	chr3R_7_13665001	chr3R_13665001	0.14	RAL-535
295	chr3R	13869304	13869374	roo	8664	399	18	70	'10-8	62.83	4.2	3.5	intron	E5 -	chr3R_18_13865001	chr3R_13865001	0.56	RAL-535
296	chr3R	14002942	14003006	FB	5	6	10	64	'6-4	63.23	6.7	1.3	intron	rdx -	chr3R_10_14000001	chr3R_14000001	0.60	RAL-535
297	chr3R	14526937	14526958	mdg1	417	7434	7	21	'4-3	61.14	6.1	1.0	intron	Pde6 -	chr3R_7_14525001	chr3R_14525001	0.57	RAL-535
298	chr3R	14688242	14688321	pogo	2097	2	10	79	'1-9	59.33	0.9	5.3	intron	Meltrin -	chr3R_10_14685001	chr3R_14685001	0.10	RAL-535
299	chr3R	14697261	14697284	P-element	2884	2860	11	23	'6-5	51.58	9.1	1.1	5` UTR	Meltrin -	chr3R_11_14695001	chr3R_14695001	0.55	RAL-535
300	chr3R	14768250	14768328	roo	8661	403	17	78	'11-6	69.86	5.5	2.6	intron	jvl +	chr3R_17_14765001	chr3R_14765001	0.65	RAL-535
301	chr3R	14862659	14862736	roo	8663	404	25	77	'14-11	67.77	3.4	5.7	intron	btsz -	chr3R_25_14860001	chr3R_14860001	0.56	RAL-535
302	chr3R	15632777	15632835	I-element	5347	2	9	58	'5-4	67.19	5.2	1.5	intergenic	not near genes	chr3R_9_15630001	chr3R_15630001	0.56	RAL-535
303	chr3R	15640426	15640491	3S18	334	5770	9	65	'4-5	57.17	6.1	1.3	intergenic	not near genes	chr3R_9_15640001	chr3R_15640001	0.44	RAL-535
304	chr3R	15714322	15714389	jockey	4776	4984	10	67	'8-2	66.37	2.7	2.7	intergenic	not near genes	chr3R_10_15710001	chr3R_15710001	0.80	RAL-535
305	chr3R	16794072	16794137	Tirant	8115	399	11	65	'4-7	67.34	2.7	3.0	intergenic	not near genes	chr3R_11_16790001	chr3R_16790001	0.36	RAL-535
306	chr3R	17095861	17095937	HMS-Beagle2	6881	7187	8	76	'7-1	66.59	1.4	3.3	intron	cher -	chr3R_8_17095001	chr3R_17095001	0.88	RAL-535
307	chr3R	17324143	17324220	diver	5889	222	24	77	'10-14	62.88	3.6	5.2	intron	beat-IIa -	chr3R_24_17320001	chr3R_17320001	0.42	RAL-535
308	chr3R	17566643	17566658	hopper	14	32	4	15	'3-1	61.39	6.7	0.5	intron	Hmx +	chr3R_4_17565001	chr3R_17565001	0.75	RAL-535
309	chr3R	17733259	17733339	INE-1	563	562	6	80	'3-3	71.77	2.3	1.8	intergenic	Lgr1 +,CG14321 +	chr3R_6_17730001	chr3R_17730001	0.50	RAL-535
310	chr3R	17826003	17826025	roo	8686	8664	4	22	'2-2	58.84	3.3	0.9	intron	tinc +	chr3R_4_17825001	chr3R_17825001	0.50	RAL-535
311	chr3R	18021958	18022041	opus	7500	7114	19	83	'9-10	66.83	5.1	3.1	intron	CG7785 +	chr3R_19_18020001	chr3R_18020001	0.47	RAL-535
312	chr3R	18172144	18172207	hopper	17	1	16	63	'4-12	66.58	3.3	3.7	intron	PP2A-B' +	chr3R_16_18170001	chr3R_18170001	0.25	RAL-535
313	chr3R	18356589	18356623	Stalker2	376	2	4	34	'2-2	53.00	0.5	2.7	intron	CG15803 -	chr3R_4_18355001	chr3R_18355001	0.50	RAL-535
314	chr3R	18851016	18851067	flea	5009	4754	4	51	'1-3	62.39	3.4	0.9	3` UTR	CR45633 -	chr3R_4_18850001	chr3R_18850001	0.25	RAL-535
315	chr3R	18930880	18930960	roo	407	8664	21	80	'12-9	63.40	7.0	2.6	intron	CG42613 +	chr3R_21_18930001	chr3R_18930001	0.57	RAL-535
316	chr3R	18941411	18941477	Quasimodo	7	7358	4	66	'3-1	68.66	0.8	2.2	intron	CG42613 +	chr3R_4_18940001	chr3R_18940001	0.75	RAL-535
317	chr3R	18954720	18954798	mdg3	5254	245	7	78	'5-2	62.96	1.0	3.5	intron,intron	CG42613 +,CG43732 +	chr3R_7_18950001	chr3R_18950001	0.71	RAL-535
318	chr3R	19099992	19100063	FB	5	1	17	71	'6-11	65.99	4.6	3.0	intron	CG6040 +	chr3R_17_19095001	chr3R_19095001	0.35	RAL-535
319	chr3R	19500277	19500309	3S18	5798	1	8	32	'4-4	61.52	2.5	2.3	intron	Dys +	chr3R_8_19500001	chr3R_19500001	0.50	RAL-535
320	chr3R	19724980	19725048	copia	6	249	11	68	'8-3	61.75	3.8	2.3	intergenic	not near genes	chr3R_11_19720001	chr3R_19720001	0.73	RAL-535
321	chr3R	19982281	19982349	hobo	4	2933	12	68	'10-2	62.57	1.6	4.6	intron	Hs6st -	chr3R_12_19980001	chr3R_19980001	0.83	RAL-535
322	chr3R	20422733	20422763	Doc	35	5	7	30	'4-3	65.62	6.2	1.0	intron	Gfrl -	chr3R_7_20420001	chr3R_20420001	0.57	RAL-535
323	chr3R	20594399	20594473	Burdock	255	8	14	74	'10-4	75.62	4.2	2.7	intron	bon +	chr3R_14_20590001	chr3R_20590001	0.71	RAL-535
324	chr3R	21714495	21714580	roo	411	8662	18	85	'9-9	65.29	4.0	3.6	intron	CG31176 -	chr3R_18_21710001	chr3R_21710001	0.50	RAL-535
325	chr3R	22800116	22800193	opus	7116	494	12	77	'3-9	66.36	3.0	3.0	intergenic	not near genes	chr3R_12_22800001	chr3R_22800001	0.25	RAL-535
326	chr3R	22834104	22834189	flea	4754	257	9	85	'3-6	68.06	3.1	2.2	intergenic	not near genes	chr3R_9_22830001	chr3R_22830001	0.33	RAL-535
327	chr3R	22840772	22840824	Burdock	6136	6361	5	52	'4-1	70.78	4.6	0.9	intergenic	not near genes	chr3R_5_22840001	chr3R_22840001	0.80	RAL-535
328	chr3R	22979345	22979397	Juan	4079	4202	11	52	'6-5	63.54	3.4	2.5	intergenic	not near genes	chr3R_11_22975001	chr3R_22975001	0.55	RAL-535
329	chr3R	23951571	23951609	Tabor	6867	7310	4	38	'2-2	60.89	2.2	1.2	intergenic	not near genes	chr3R_4_23950001	chr3R_23950001	0.50	RAL-535
330	chr3R	24074843	24074871	jockey	4674	4685	5	28	'2-3	57.12	7.6	0.6	intron	4EHP -	chr3R_5_24070001	chr3R_24070001	0.40	RAL-535
331	chr3R	24662247	24662267	jockey	96	76	8	20	'3-5	54.64	4.2	1.5	intergenic	slo +,Ppox -	chr3R_8_24660001	chr3R_24660001	0.38	RAL-535
332	chr3R	24825491	24825566	gypsy5	6937	410	24	75	'10-14	66.23	6.9	3.0	5` UTR	niki -	chr3R_24_24825001	chr3R_24825001	0.42	RAL-535
333	chr3R	25131145	25131217	297	6583	395	9	72	'8-1	70.52	4.3	1.7	3` UTR	Clbn +	chr3R_9_25130001	chr3R_25130001	0.89	RAL-535
334	chr3R	25712447	25712522	roo	9069	8664	13	75	'8-5	67.40	4.6	2.3	intron	LpR2 -	chr3R_13_25710001	chr3R_25710001	0.62	RAL-535
335	chr3R	25788361	25788417	pogo	2077	4	6	56	'3-3	68.14	2.5	1.7	intron	CG31380 -	chr3R_6_25785001	chr3R_25785001	0.50	RAL-535
336	chr3R	26421505	26421579	roo	8664	402	17	74	'6-11	69.64	2.5	4.9	intergenic	not near genes	chr3R_17_26420001	chr3R_26420001	0.35	RAL-535
337	chr3R	26998340	26998421	roo	8667	412	9	81	'5-4	68.63	2.0	3.0	intron	RYa-R +	chr3R_9_26995001	chr3R_26995001	0.56	RAL-535
338	chr3R	27782450	27782518	pogo	2091	3	13	68	'5-8	65.17	4.0	2.6	intron	CG34353 -	chr3R_13_27780001	chr3R_27780001	0.38	RAL-535
339	chr3R	27836174	27836204	Quasimodo	39	39	4	30	'3-1	68.79	10.8	0.3	intron	CG34353 -	chr3R_4_27835001	chr3R_27835001	0.75	RAL-535
340	chr3R	27898223	27898302	roo	8666	409	15	79	'5-10	66.14	2.6	4.2	intron	CG34353 -	chr3R_15_27895001	chr3R_27895001	0.33	RAL-535
341	chr3R	27989672	27989753	roo	8665	410	11	81	'4-7	67.67	1.6	4.2	intergenic	CG4815 -	chr3R_11_27985001	chr3R_27985001	0.36	RAL-535
342	chr3R	28361071	28361115	roo	16	394	5	44	'3-2	68.87	2.2	1.6	intergenic	not near genes	chr3R_5_28360001	chr3R_28360001	0.60	RAL-535
343	chr3R	28388763	28388832	blood	7011	7376	4	69	'3-1	61.45	4.4	0.7	intergenic	not near genes	chr3R_4_28385001	chr3R_28385001	0.75	RAL-535
344	chr3R	28431323	28431398	blood	7384	7011	15	75	'8-7	65.19	5.4	2.3	intron	beat-VI +	chr3R_15_28430001	chr3R_28430001	0.53	RAL-535
345	chr3R	28800395	28800472	roo	8664	405	12	77	'7-5	64.73	4.8	2.1	intergenic	not near genes	chr3R_12_28800001	chr3R_28800001	0.58	RAL-535
346	chr3R	28804666	28804711	mdg1	7455	7070	6	45	'4-2	68.22	3.1	1.5	intergenic	not near genes	chr3R_6_28800001	chr3R_28800001	0.67	RAL-535
347	chr3R	28965951	28966023	1360	3387	3	19	72	'7-12	67.67	5.5	2.9	intron	CG14521 -	chr3R_19_28965001	chr3R_28965001	0.37	RAL-535
348	chr3R	28983839	28983920	roo	3	412	15	81	'5-10	64.63	5.5	2.3	intergenic	not near genes	chr3R_15_28980001	chr3R_28980001	0.33	RAL-535
349	chr3R	29095135	29095182	roo	8676	391	5	47	'3-2	69.30	4.1	1.0	intron	CG11873 +	chr3R_5_29095001	chr3R_29095001	0.60	RAL-535
350	chr3R	29346252	29346326	297	6972	4	13	74	'7-6	67.96	4.2	2.5	intergenic	not near genes	chr3R_13_29345001	chr3R_29345001	0.54	RAL-535
351	chr3R	29465383	29465459	3S18	341	5764	17	76	'4-13	63.64	4.4	3.1	intron	Ptp99A +	chr3R_17_29465001	chr3R_29465001	0.24	RAL-535
352	chr3R	29499025	29499100	blood	7388	1	14	75	'10-4	65.76	1.5	5.6	3` UTR	Trc8 -	chr3R_14_29495001	chr3R_29495001	0.71	RAL-535
353	chr3R	29644210	29644243	jockey	5	36	16	33	'10-6	63.63	4.3	3.0	intron	Dop1R2 -	chr3R_16_29640001	chr3R_29640001	0.62	RAL-535
354	chr3R	29662714	29662733	hobo	1	21	4	19	'3-1	65.01	7.5	0.5	intergenic	not near genes	chr3R_4_29660001	chr3R_29660001	0.75	RAL-535
355	chr3R	29952694	29952714	flea	4757	20	9	20	'7-2	60.10	9.8	0.8	intron	TkR99D -	chr3R_9_29950001	chr3R_29950001	0.78	RAL-535
356	chr3R	30384319	30384399	412	496	3	13	80	'6-7	64.35	6.0	1.9	intergenic	not near genes	chr3R_13_30380001	chr3R_30380001	0.46	RAL-535
357	chr3R	30765617	30765682	hopper	7	1406	11	65	'6-5	62.66	4.6	2.0	intergenic	zfh1 +	chr3R_11_30765001	chr3R_30765001	0.55	RAL-535
358	chr3R	30803828	30803893	FB	9	2	11	65	'4-7	63.80	5.3	1.7	intron	wts -	chr3R_11_30800001	chr3R_30800001	0.36	RAL-535
359	chr3R	30980396	30980475	Burdock	6136	252	19	79	'10-9	69.62	11.0	1.6	intron	5-HT7 -	chr3R_19_30980001	chr3R_30980001	0.53	RAL-535
360	chr3R	31663304	31663328	jockey	30	6	10	24	'8-2	57.67	5.7	1.5	3` UTR	kek6 +	chr3R_10_31660001	chr3R_31660001	0.80	RAL-535
361	chr3R	31887336	31887367	Tirant	29	8482	5	31	'1-4	67.77	8.6	0.5	intron	heph -	chr3R_5_31885001	chr3R_31885001	0.20	RAL-535
362	chrX	350683	350761	roo	8660	406	12	78	'6-6	63.99	2.2	3.8	intron,exon	CG32816 -,CG43181 +	chrX_12_350001	chrX_350001	0.50	RAL-535
363	chrX	451544	451615	Transpac	309	4929	6	71	'5-1	64.08	2.6	1.7	intron	CG32816 -	chrX_6_450001	chrX_450001	0.83	RAL-535
364	chrX	711737	711810	297	1	6967	5	73	'3-2	60.80	2.7	1.4	intron	sdk +	chrX_5_710001	chrX_710001	0.60	RAL-535
365	chrX	769880	769951	P-element	2884	2883	15	71	'6-9	54.57	2.1	4.8	intergenic	fz3 +	chrX_15_765001	chrX_765001	0.40	RAL-535
366	chrX	963984	964047	roo	395	8667	15	63	'6-9	64.27	3.1	3.7	intergenic	not near genes	chrX_15_960001	chrX_960001	0.40	RAL-535
367	chrX	976546	976624	copia	254	4869	5	78	'2-3	68.03	4.0	1.0	intergenic	not near genes	chrX_5_975001	chrX_975001	0.40	RAL-535
368	chrX	1333856	1333913	Transpac	4945	311	7	57	'1-6	63.94	5.1	1.1	intron	CG11409 -	chrX_7_1330001	chrX_1330001	0.14	RAL-535
369	chrX	1418396	1418480	roo	8661	409	14	84	'9-5	66.51	4.2	2.7	intron	futsch +	chrX_14_1415001	chrX_1415001	0.64	RAL-535
370	chrX	2197695	2197748	I-element	2	5341	8	53	'5-3	66.21	4.1	1.6	intron	Mct1 +	chrX_8_2195001	chrX_2195001	0.62	RAL-535
371	chrX	2336057	2336128	roo	4	403	9	71	'7-2	66.36	4.1	1.8	intron	phl +	chrX_9_2335001	chrX_2335001	0.78	RAL-535
372	chrX	2559952	2560020	roo	4	400	13	68	'7-6	66.94	4.0	2.6	intron	Pdfr +	chrX_13_2555001	chrX_2555001	0.54	RAL-535
373	chrX	2745151	2745195	FB	1	29	8	44	'6-2	66.97	2.9	2.1	intron	kirre +	chrX_8_2745001	chrX_2745001	0.75	RAL-535
374	chrX	3197800	3197881	roo	8663	409	9	81	'4-5	67.06	2.7	2.4	intron	dnc +	chrX_9_3195001	chrX_3195001	0.44	RAL-535
375	chrX	3504894	3504946	roo	395	8679	7	52	'6-1	59.24	5.2	1.1	intron	CR44999 +	chrX_7_3500001	chrX_3500001	0.86	RAL-535
376	chrX	3629495	3629570	rover	346	2	8	75	'5-3	65.03	2.8	2.1	intron	AstA-R1 +	chrX_8_3625001	chrX_3625001	0.62	RAL-535
377	chrX	4200219	4200296	opus	7113	7493	12	77	'7-5	71.98	3.6	2.6	intron	Fas2 -	chrX_12_4200001	chrX_4200001	0.58	RAL-535
378	chrX	4216069	4216091	hopper	1410	1387	5	22	'3-2	63.22	4.3	0.9	intergenic	not near genes	chrX_5_4215001	chrX_4215001	0.60	RAL-535
379	chrX	4691818	4691900	flea	257	4754	18	82	'8-10	65.29	3.6	3.9	exon	ctp +	chrX_18_4690001	chrX_4690001	0.44	RAL-535
380	chrX	4866570	4866649	roo	8666	409	14	79	'3-11	64.36	5.0	2.3	intron	CG42594 +	chrX_14_4865001	chrX_4865001	0.21	RAL-535
381	chrX	4874908	4874926	mdg3	245	5496	9	18	'2-7	60.93	10.6	0.8	intron	CG42594 +	chrX_9_4870001	chrX_4870001	0.22	RAL-535
382	chrX	5147832	5147860	jockey	4692	4675	7	28	'3-4	61.50	5.0	1.2	intron,intron	CG15465 +,rg +	chrX_7_5145001	chrX_5145001	0.43	RAL-535
383	chrX	5156460	5156479	mdg1	24	1	6	19	'4-2	62.75	1.4	2.5	intron,intron	CG15465 +,rg +	chrX_6_5155001	chrX_5155001	0.67	RAL-535
384	chrX	5163401	5163457	hobo	7	2926	5	56	'3-2	61.93	4.0	1.0	intron,intron	CG15465 +,rg +	chrX_5_5160001	chrX_5160001	0.60	RAL-535
385	chrX	5479141	5479218	springer	389	7147	14	77	'9-5	65.71	4.6	2.5	exon	SPR +	chrX_14_5475001	chrX_5475001	0.64	RAL-535
386	chrX	5658002	5658064	opus	7022	7500	8	62	'3-5	66.17	3.2	1.9	intron	CG42265 -	chrX_8_5655001	chrX_5655001	0.38	RAL-535
387	chrX	6380869	6380948	Transpac	5226	4918	17	79	'10-7	65.70	2.5	4.9	intergenic	not near genes	chrX_17_6380001	chrX_6380001	0.59	RAL-535
388	chrX	6755738	6755756	transib4	160	178	6	18	'3-3	77.61	6.2	0.8	3` UTR	CG14439 +	chrX_6_6755001	chrX_6755001	0.50	RAL-535
389	chrX	7042665	7042738	hobo	3	2938	21	73	'13-8	65.90	4.5	3.8	intron	CG12541 -	chrX_21_7040001	chrX_7040001	0.62	RAL-535
390	chrX	7045568	7045744	hobo	2707	8	8	176	'5-3	64.63	1.1	3.8	intron	CG12541 -	chrX_8_7045001	chrX_7045001	0.62	RAL-535
391	chrX	7154180	7154238	hopper	1410	18	11	58	'9-2	58.56	5.4	1.7	intron	CG9650 +	chrX_11_7150001	chrX_7150001	0.82	RAL-535
392	chrX	7570471	7570547	3S18	1	6105	5	76	'4-1	68.81	2.9	1.3	intergenic	not near genes	chrX_5_7570001	chrX_7570001	0.80	RAL-535
393	chrX	8642934	8643043	Stalker3T	201	201	5	109	'3-2	71.36	2.3	1.5	intron	oc -	chrX_5_8640001	chrX_8640001	0.60	RAL-535
394	chrX	9508056	9508111	jockey	9	4979	20	55	'10-10	61.51	4.0	4.0	intron	CG32700 -	chrX_20_9505001	chrX_9505001	0.50	RAL-535
395	chrX	9600281	9600313	jockey	4691	4673	7	32	'3-4	62.20	4.9	1.2	intergenic	not near genes	chrX_7_9600001	chrX_9600001	0.43	RAL-535
396	chrX	10087675	10087731	412	495	7080	10	56	'8-2	62.62	3.2	2.4	intron	RhoU +	chrX_10_10085001	chrX_10085001	0.80	RAL-535
397	chrX	10118202	10118253	FB	7	17	11	51	'7-4	63.34	4.7	1.9	intron,intron	RhoU +,CR44894 -	chrX_11_10115001	chrX_10115001	0.64	RAL-535
398	chrX	10307039	10307114	opus	7492	7114	9	75	'3-6	66.75	4.6	1.6	intron	alpha-Man-I -	chrX_9_10305001	chrX_10305001	0.33	RAL-535
399	chrX	10313682	10313708	hobo	5	19	6	26	'2-4	66.48	1.8	2.1	intron	alpha-Man-I -	chrX_6_10310001	chrX_10310001	0.33	RAL-535
400	chrX	10406125	10406172	jockey	4986	4684	12	47	'1-11	57.79	6.2	1.7	intron	flw +	chrX_12_10405001	chrX_10405001	0.08	RAL-535
401	chrX	10653361	10653424	hobo	4	2929	11	63	'6-5	65.94	6.1	1.5	intron	X11Lbeta +	chrX_11_10650001	chrX_10650001	0.55	RAL-535
402	chrX	11028528	11028594	roo	411	16	8	66	'5-3	67.85	5.2	1.3	intron	CG42339 -	chrX_8_11025001	chrX_11025001	0.62	RAL-535
403	chrX	11221701	11221766	pogo	7	2094	5	65	'3-2	59.46	0.9	2.6	intergenic	not near genes	chrX_5_11220001	chrX_11220001	0.60	RAL-535
404	chrX	12386567	12386621	3S18	26	341	5	54	'2-3	63.73	0.0	5.0	intergenic	not near genes	chrX_5_12385001	chrX_12385001	0.40	RAL-535
405	chrX	12625543	12625612	hobo	2937	7	13	69	'7-6	61.91	4.9	2.2	intron	CG15728 +	chrX_13_12625001	chrX_12625001	0.54	RAL-535
406	chrX	12879596	12879646	roo	8691	405	8	50	'1-7	65.46	3.3	1.9	intron	Pde9 -	chrX_8_12875001	chrX_12875001	0.12	RAL-535
407	chrX	13279109	13279128	1360	22	3	5	19	'3-2	62.93	2.9	1.3	intron	HDAC4 -	chrX_5_13275001	chrX_13275001	0.60	RAL-535
408	chrX	13641965	13642038	P-element	2885	2886	8	73	'5-3	54.48	4.2	1.5	intron	NFAT +	chrX_8_13640001	chrX_13640001	0.62	RAL-535
409	chrX	13840463	13840481	Stalker	7235	366	4	18	'2-2	58.26	4.0	0.8	intron	AMPdeam -	chrX_4_13840001	chrX_13840001	0.50	RAL-535
410	chrX	14365823	14365892	hopper	1403	1413	5	69	'2-3	65.49	3.7	1.1	intron	dpr8 +	chrX_5_14365001	chrX_14365001	0.40	RAL-535
411	chrX	14375160	14375232	Tirant	8503	9	15	72	'11-4	63.59	4.9	2.5	intron	dpr8 +	chrX_15_14375001	chrX_14375001	0.73	RAL-535
412	chrX	14550641	14550703	1360	3374	3387	10	62	'4-6	66.28	4.4	1.9	intergenic	not near genes	chrX_10_14550001	chrX_14550001	0.40	RAL-535
413	chrX	14914358	14914416	mdg3	5497	20	7	58	'4-3	66.55	2.4	2.1	intron	Flo2 +	chrX_7_14910001	chrX_14910001	0.57	RAL-535
414	chrX	14994326	14994400	412	493	6	14	74	'9-5	62.50	3.6	3.0	intron	eag +	chrX_14_14990001	chrX_14990001	0.64	RAL-535
415	chrX	15432089	15432110	hobo	15	35	6	21	'3-3	70.81	2.4	1.8	intron	Cngl -	chrX_6_15430001	chrX_15430001	0.50	RAL-535
416	chrX	15841152	15841176	INE-1	139	162	6	24	'3-3	62.05	4.8	1.0	3` UTR	CG8565 +	chrX_6_15840001	chrX_15840001	0.50	RAL-535
417	chrX	16877722	16877793	hopper	1413	8	13	71	'8-5	63.27	0.5	8.7	intergenic	not near genes	chrX_13_16875001	chrX_16875001	0.62	RAL-535
418	chrX	16947590	16947616	1360	28	2	12	26	'7-5	62.71	2.4	3.5	intron	RhoGAP15B +	chrX_12_16945001	chrX_16945001	0.58	RAL-535
419	chrX	17062162	17062224	297	6597	6972	12	62	'2-10	69.66	2.1	3.9	intron	CG45002 -	chrX_12_17060001	chrX_17060001	0.17	RAL-535
420	chrX	17296422	17296492	roo	410	7	13	70	'9-4	66.70	2.1	4.2	intron,intron	CG5445 +,Fim -	chrX_13_17295001	chrX_17295001	0.69	RAL-535
421	chrX	17434871	17434941	hobo	2934	3	14	70	'4-10	61.97	1.3	6.1	intron	CG12994 -	chrX_14_17430001	chrX_17430001	0.29	RAL-535
422	chrX	17465088	17465167	roo	409	8664	8	79	'2-6	71.67	1.5	3.2	intron	CG43658 -	chrX_8_17465001	chrX_17465001	0.25	RAL-535
423	chrX	17691069	17691125	roo	2	9049	6	56	'4-2	73.71	3.2	1.4	intron	chas -	chrX_6_17690001	chrX_17690001	0.67	RAL-535
424	chrX	17741084	17741155	roo	402	3	19	71	'6-13	64.79	2.7	5.1	intron	CG42684 +	chrX_19_17740001	chrX_17740001	0.32	RAL-535
425	chrX	17837969	17838041	S-element	1710	6	8	72	'5-3	59.43	3.9	1.6	intron	CG6398 +	chrX_8_17835001	chrX_17835001	0.62	RAL-535
426	chrX	18193723	18193793	hopper	1412	1409	15	70	'13-2	63.31	2.3	4.5	intron	Frq2 +	chrX_15_18190001	chrX_18190001	0.87	RAL-535
427	chrX	18424842	18424895	Stalker2	7611	7259	12	53	'4-8	54.43	5.3	1.9	intron	CG42323 +	chrX_12_18420001	chrX_18420001	0.33	RAL-535
428	chrX	19473525	19473609	roo	411	8663	28	84	'19-9	71.09	5.2	4.5	intergenic	not near genes	chrX_28_19470001	chrX_19470001	0.68	RAL-535
429	chrX	19825725	19825753	hopper	1409	1382	7	28	'3-4	61.86	6.2	1.0	intergenic	not near genes	chrX_7_19825001	chrX_19825001	0.43	RAL-535
430	chrX	19887067	19887122	P-element	2883	2881	11	55	'6-5	47.14	4.4	2.0	intron,exon	Hers +,amn -	chrX_11_19885001	chrX_19885001	0.55	RAL-535
431	chrX	20106326	20106353	hopper	3	1385	5	27	'4-1	65.60	6.6	0.7	intergenic	not near genes	chrX_5_20105001	chrX_20105001	0.80	RAL-535
432	chrX	20139352	20139381	X-element	39	10	12	29	'8-4	65.20	4.6	2.1	intergenic	CG42583 +,CG15322 +	chrX_12_20135001	chrX_20135001	0.67	RAL-535
433	chrX	20288075	20288146	297	6592	395	6	71	'3-3	64.68	1.4	2.5	intergenic	not near genes	chrX_6_20285001	chrX_20285001	0.50	RAL-535
434	chrX	20330488	20330550	P-element	1	2876	6	62	'3-3	47.74	2.3	1.8	intergenic	CG1504 -	chrX_6_20330001	chrX_20330001	0.50	RAL-535
435	chrX	20365214	20365229	flea	252	4996	6	15	'4-2	67.56	4.7	1.1	intergenic	not near genes	chrX_6_20365001	chrX_20365001	0.67	RAL-535
436	chrX	20735751	20735774	I-element	5349	5326	4	23	'2-2	66.67	2.0	1.3	intron	CG1324 -	chrX_4_20735001	chrX_20735001	0.50	RAL-535
437	chrX	20897141	20897203	3S18	5772	329	9	62	'4-5	66.55	3.4	2.0	intron	shakB -	chrX_9_20895001	chrX_20895001	0.44	RAL-535
438	chrX	21124507	21124576	P-element	2884	2881	17	69	'11-6	48.46	4.6	3.0	intron	CG34120 +	chrX_17_21120001	chrX_21120001	0.65	RAL-535
439	chrX	21399406	21399463	pogo	9	2086	11	57	'4-7	63.31	1.9	3.8	intergenic	not near genes	chrX_11_21395001	chrX_21395001	0.36	RAL-535
440	chrX	21474418	21474435	1731	12	23	8	17	'4-4	70.99	7.9	0.9	intergenic	not near genes	chrX_8_21470001	chrX_21470001	0.50	RAL-535
441	chrX	21637892	21637967	412	494	6	11	75	'7-4	60.15	2.8	2.9	intergenic	not near genes	chrX_11_21635001	chrX_21635001	0.64	RAL-535
442	chrX	21667915	21667932	gypsy2	6508	6491	6	17	'3-3	67.11	0.0	6.0	intergenic	not near genes	chrX_6_21665001	chrX_21665001	0.50	RAL-535
443	chrX	21907787	21907815	accord	384	356	4	28	'1-3	72.22	0.0	4.0	intergenic	not near genes	chrX_4_21905001	chrX_21905001	0.25	RAL-535
444	chrX	22517613	22517672	1360	25	3379	5	59	'3-2	67.14	0.2	4.2	intron	CG17600 +	chrX_5_22515001	chrX_22515001	0.60	RAL-535
445	chrX	22670759	22670832	Transpac	5224	4	15	73	'10-5	64.57	3.8	3.1	intron	CR44997 +	chrX_15_22670001	chrX_22670001	0.67	RAL-535
446	chrX	23108299	23108316	BS3	1423	1406	9	17	'4-5	55.70	5.2	1.5	3` UTR	ATbp +	chrX_9_23105001	chrX_23105001	0.44	RAL-535
447	chrY	975832	975905	1360	1	3	4	73	'2-2	56.03	61.2	0.1	intergenic	not near genes	chrY_4_975001	chrY_975001	0.50	RAL-535
448	chrY	2720333	2720394	flea	20	257	12	61	'6-6	67.44	0.0	12.0	intergenic	not near genes	chrY_12_2720001	chrY_2720001	0.50	RAL-535
449	chrY	2720349	2720370	1360	3220	3200	4	21	'2-2	60.67	0.0	4.0	intergenic	not near genes	chrY_4_2720001	chrY_2720001	0.50	RAL-535