SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	222110	222195	P-element	2886	2879	11	85	'8-3	45.69	2.8	2.9	intron	kis -	chr2L_11_220001	chr2L_220001	0.73	RAL-531
2	chr2L	310195	310287	P-element	2882	2	21	92	'9-12	44.43	5.0	3.5	intron	Plc21C +	chr2L_21_310001	chr2L_310001	0.43	RAL-531
3	chr2L	1076259	1076338	FB	27	5	12	79	'7-5	68.59	3.5	2.7	intron	S -	chr2L_12_1075001	chr2L_1075001	0.58	RAL-531
4	chr2L	1229583	1229697	opus	15	491	7	114	'1-6	61.14	7.4	0.8	3` UTR	CG42329 +	chr2L_7_1225001	chr2L_1225001	0.14	RAL-531
5	chr2L	1366516	1366584	roo	392	2	4	68	'2-2	48.30	0.4	2.9	intergenic	not near genes	chr2L_4_1365001	chr2L_1365001	0.50	RAL-531
6	chr2L	1799146	1799217	roo	9034	5	15	71	'5-10	65.83	8.3	1.6	intergenic	not near genes	chr2L_15_1795001	chr2L_1795001	0.33	RAL-531
7	chr2L	2471395	2471513	3S18	344	5765	25	118	'12-13	64.35	5.7	3.7	intergenic	CR45286 -	chr2L_25_2470001	chr2L_2470001	0.48	RAL-531
8	chr2L	2535075	2535187	412	7539	2	18	112	'7-11	64.75	7.0	2.2	intergenic	not near genes	chr2L_18_2535001	chr2L_2535001	0.39	RAL-531
9	chr2L	2547818	2547859	blood	7064	12	14	41	'7-7	66.84	8.6	1.5	intergenic	not near genes	chr2L_14_2545001	chr2L_2545001	0.50	RAL-531
10	chr2L	2548679	2548782	roo	8683	411	18	103	'8-10	67.37	7.5	2.1	intergenic	not near genes	chr2L_18_2545001	chr2L_2545001	0.44	RAL-531
11	chr2L	2616611	2616691	mdg1	7064	411	15	80	'7-8	67.55	2.6	4.2	intergenic	not near genes	chr2L_15_2615001	chr2L_2615001	0.47	RAL-531
12	chr2L	2621555	2621598	BS	5085	5039	15	43	'8-7	63.02	4.6	2.7	intergenic	not near genes	chr2L_15_2620001	chr2L_2620001	0.53	RAL-531
13	chr2L	2872069	2872095	pogo	2098	2057	5	26	'2-3	65.42	9.7	0.5	intron	CG31694 -	chr2L_5_2870001	chr2L_2870001	0.40	RAL-531
14	chr2L	2873392	2873427	pogo	32	3	9	35	'6-3	67.25	7.2	1.1	intron	CG31694 -	chr2L_9_2870001	chr2L_2870001	0.67	RAL-531
15	chr2L	3701045	3701145	297	378	6	13	100	'8-5	66.28	4.2	2.5	3` UTR	Sfp24C1 +	chr2L_13_3700001	chr2L_3700001	0.62	RAL-531
16	chr2L	3740504	3740602	jockey	4985	4675	22	98	'14-8	63.20	6.8	2.8	intron	CG10019 +	chr2L_22_3740001	chr2L_3740001	0.64	RAL-531
17	chr2L	4034472	4034571	412	489	11	17	99	'10-7	66.38	6.1	2.4	intron	ed +	chr2L_17_4030001	chr2L_4030001	0.59	RAL-531
18	chr2L	4139244	4139345	roo	401	8676	7	101	'3-4	72.75	7.2	0.9	intergenic	not near genes	chr2L_7_4135001	chr2L_4135001	0.43	RAL-531
19	chr2L	5056329	5056431	1360	3386	1	14	102	'4-10	67.52	3.2	3.3	exon	CG31918 -	chr2L_14_5055001	chr2L_5055001	0.29	RAL-531
20	chr2L	5151095	5151200	opus	16	499	12	105	'3-9	63.98	6.8	1.5	intron	Msp300 +	chr2L_12_5150001	chr2L_5150001	0.25	RAL-531
21	chr2L	5724054	5724370	1360	1	32	30	316	'19-11	66.34	2.2	9.4	intergenic	sip1 +	chr2L_30_5720001	chr2L_5720001	0.63	RAL-531
22	chr2L	5787570	5787676	roo	401	8671	21	106	'8-13	65.18	5.3	3.3	intron	CG9171 -	chr2L_21_5785001	chr2L_5785001	0.38	RAL-531
23	chr2L	5804208	5804327	jockey	36	4765	26	119	'13-13	63.55	4.7	4.6	intergenic	CG7239 +	chr2L_26_5800001	chr2L_5800001	0.50	RAL-531
24	chr2L	6319144	6319225	P-element	18	2886	11	81	'7-4	54.34	2.7	3.0	intron	Ddr +	chr2L_11_6315001	chr2L_6315001	0.64	RAL-531
25	chr2L	6746095	6746214	Ivk	5378	5152	24	119	'13-11	59.37	5.8	3.5	intron	CG11221 +	chr2L_24_6745001	chr2L_6745001	0.54	RAL-531
26	chr2L	7437771	7437873	roo	400	8674	19	102	'12-7	66.39	2.1	6.1	5` UTR	CG5973 +	chr2L_19_7435001	chr2L_7435001	0.63	RAL-531
27	chr2L	7459548	7459618	BS	5002	5075	25	70	'14-11	63.58	7.2	3.0	intron	Gr28b -	chr2L_25_7455001	chr2L_7455001	0.56	RAL-531
28	chr2L	7588185	7588324	mdg1	27	7069	7	139	'5-2	77.41	0.0	7.0	intergenic	not near genes	chr2L_7_7585001	chr2L_7585001	0.71	RAL-531
29	chr2L	7937226	7937328	BS	5081	5085	5	102	'3-2	65.85	4.3	0.9	intron	Snoo -	chr2L_5_7935001	chr2L_7935001	0.60	RAL-531
30	chr2L	7950988	7951111	412	2	7539	18	123	'11-7	66.27	0.1	16.4	intron	Snoo -	chr2L_18_7950001	chr2L_7950001	0.61	RAL-531
31	chr2L	7991970	7992090	Burdock	6137	254	31	120	'15-16	65.23	5.6	4.7	intron	pes -	chr2L_31_7990001	chr2L_7990001	0.48	RAL-531
32	chr2L	8737431	8737515	1360	13	3379	23	84	'9-14	62.52	3.2	5.5	intron	raw -	chr2L_23_8735001	chr2L_8735001	0.39	RAL-531
33	chr2L	8992618	8992716	pogo	16	2096	20	98	'13-7	65.21	1.9	6.9	intron	CG9555 +	chr2L_20_8990001	chr2L_8990001	0.65	RAL-531
34	chr2L	9226507	9226619	297	4	6970	15	112	'5-10	67.44	2.7	4.1	intron	tai +	chr2L_15_9225001	chr2L_9225001	0.33	RAL-531
35	chr2L	9490722	9490769	hobo	1	42	10	47	'2-8	64.02	4.3	1.9	intergenic	Gdi -	chr2L_10_9490001	chr2L_9490001	0.20	RAL-531
36	chr2L	9850993	9851046	jockey	4758	4811	21	53	'10-11	66.53	10.5	1.8	intron	nAChRalpha6 -	chr2L_21_9850001	chr2L_9850001	0.48	RAL-531
37	chr2L	10042842	10042932	jockey	4683	4987	18	90	'6-12	61.44	5.5	2.8	intergenic	not near genes	chr2L_18_10040001	chr2L_10040001	0.33	RAL-531
38	chr2L	10101803	10101913	Quasimodo	7359	4	7	110	'2-5	67.47	4.4	1.3	intron,intron	CG44153 -,CG34109 +	chr2L_7_10100001	chr2L_10100001	0.29	RAL-531
39	chr2L	10227249	10227323	pogo	2100	44	10	74	'7-3	65.22	3.1	2.4	intergenic	CG5708 -	chr2L_10_10225001	chr2L_10225001	0.70	RAL-531
40	chr2L	10497024	10497139	1360	3387	3387	19	115	'12-7	65.18	4.5	3.5	intron	Myo31DF -	chr2L_19_10495001	chr2L_10495001	0.63	RAL-531
41	chr2L	10897001	10897096	Tirant	8115	399	13	95	'6-7	65.93	4.0	2.6	intergenic	not near genes	chr2L_13_10895001	chr2L_10895001	0.46	RAL-531
42	chr2L	10910928	10910965	412	495	457	7	37	'5-2	61.67	10.4	0.6	intergenic	CG14069 -	chr2L_7_10910001	chr2L_10910001	0.71	RAL-531
43	chr2L	10943423	10943531	roo	8666	408	20	108	'11-9	66.95	5.8	2.9	intron,3` UTR	dpr2 -,CR44493 -	chr2L_20_10940001	chr2L_10940001	0.55	RAL-531
44	chr2L	10960974	10961091	roo	8668	409	23	117	'10-13	62.23	5.8	3.4	intron	dpr2 -	chr2L_23_10960001	chr2L_10960001	0.43	RAL-531
45	chr2L	11071810	11071846	F-element	4619	4617	7	36	'6-1	49.34	5.5	1.1	intergenic	CG14915 +	chr2L_7_11070001	chr2L_11070001	0.86	RAL-531
46	chr2L	12266464	12266510	jockey	4582	4558	4	46	'2-2	67.03	4.7	0.7	intron	aret +	chr2L_4_12265001	chr2L_12265001	0.50	RAL-531
47	chr2L	12275135	12275316	HeT-A	5766	5765	4	181	'2-2	59.52	1.8	1.4	intron	aret +	chr2L_4_12275001	chr2L_12275001	0.50	RAL-531
48	chr2L	12322344	12322460	Max-element	300	3	6	116	'5-1	63.37	4.2	1.2	intergenic	not near genes	chr2L_6_12320001	chr2L_12320001	0.83	RAL-531
49	chr2L	12415344	12415453	roo	400	8667	29	109	'20-9	65.93	6.0	4.1	intron	vir-1 -	chr2L_29_12415001	chr2L_12415001	0.69	RAL-531
50	chr2L	12461460	12461547	opus	26	499	13	87	'6-7	71.53	3.8	2.7	intron	bun -	chr2L_13_12460001	chr2L_12460001	0.46	RAL-531
51	chr2L	12593447	12593554	mdg3	248	5252	19	107	'12-7	62.95	6.3	2.6	intron	nub +	chr2L_19_12590001	chr2L_12590001	0.63	RAL-531
52	chr2L	13050885	13050925	hobo	8	11	11	40	'7-4	63.34	1.8	3.9	intron	CG9932 -	chr2L_11_13050001	chr2L_13050001	0.64	RAL-531
53	chr2L	13191505	13191608	S-element	1711	8	12	103	'7-5	65.71	2.3	3.6	intron	CG16974 -	chr2L_12_13190001	chr2L_13190001	0.58	RAL-531
54	chr2L	13259022	13259132	mdg1	7039	7449	24	110	'12-12	65.42	7.0	3.0	intergenic	CG31730 -,CG31851 +	chr2L_24_13255001	chr2L_13255001	0.50	RAL-531
55	chr2L	13341596	13341703	Max-element	8529	7	5	107	'2-3	63.67	7.2	0.6	intergenic	not near genes	chr2L_5_13340001	chr2L_13340001	0.40	RAL-531
56	chr2L	13568732	13568834	Tirant	8110	399	13	102	'3-10	66.15	5.0	2.2	intron	kuz +	chr2L_13_13565001	chr2L_13565001	0.23	RAL-531
57	chr2L	13598460	13598576	mdg1	7456	3	29	116	'20-9	68.74	7.0	3.6	intron	kuz +	chr2L_29_13595001	chr2L_13595001	0.69	RAL-531
58	chr2L	13632218	13632310	hopper	10	1391	12	92	'8-4	61.51	1.7	4.4	intron	kuz +	chr2L_12_13630001	chr2L_13630001	0.67	RAL-531
59	chr2L	13881246	13881368	Transpac	309	4918	30	122	'10-20	68.03	5.8	4.4	intron	CenG1A +	chr2L_30_13880001	chr2L_13880001	0.33	RAL-531
60	chr2L	14151907	14151975	jockey	26	4986	18	68	'6-12	63.31	6.5	2.4	intron	CG17341 +	chr2L_18_14150001	chr2L_14150001	0.33	RAL-531
61	chr2L	14262779	14262858	pogo	2	2059	14	79	'9-5	66.94	6.7	1.8	intergenic	wb +	chr2L_14_14260001	chr2L_14260001	0.64	RAL-531
62	chr2L	14678743	14678864	297	6581	389	6	121	'3-3	70.64	5.4	0.9	intron	osp -	chr2L_6_14675001	chr2L_14675001	0.50	RAL-531
63	chr2L	15019878	15019972	BS	5079	4798	30	94	'14-16	64.14	6.5	4.0	intron	GABA-B-R1 +	chr2L_30_15015001	chr2L_15015001	0.47	RAL-531
64	chr2L	15056972	15057048	Tirant	3	8479	6	76	'4-2	68.94	6.1	0.8	intron	ck -	chr2L_6_15055001	chr2L_15055001	0.67	RAL-531
65	chr2L	15184703	15184741	hobo	2	40	7	38	'3-4	67.80	2.8	1.8	intron	CG4168 -	chr2L_7_15180001	chr2L_15180001	0.43	RAL-531
66	chr2L	15228750	15228851	mdg1	9	7448	17	101	'7-10	63.68	6.4	2.3	3` UTR	ZnT35C -	chr2L_17_15225001	chr2L_15225001	0.41	RAL-531
67	chr2L	15833008	15833094	hobo	2931	6	10	86	'2-8	62.20	3.5	2.2	intergenic	not near genes	chr2L_10_15830001	chr2L_15830001	0.20	RAL-531
68	chr2L	15960162	15960275	P-element	4	2886	23	113	'6-17	53.14	5.4	3.6	intron	beat-Ib -	chr2L_23_15960001	chr2L_15960001	0.26	RAL-531
69	chr2L	15975886	15975924	297	351	394	14	38	'6-8	67.59	6.2	1.9	intergenic	not near genes	chr2L_14_15975001	chr2L_15975001	0.43	RAL-531
70	chr2L	15997916	15997961	F-element	15	15	7	45	'3-4	65.07	8.1	0.8	intergenic	not near genes	chr2L_7_15995001	chr2L_15995001	0.43	RAL-531
71	chr2L	16093002	16093109	17.6	10	7417	13	107	'1-12	68.92	5.4	2.0	intergenic	not near genes	chr2L_13_16090001	chr2L_16090001	0.08	RAL-531
72	chr2L	16118283	16118386	Transpac	298	7	15	103	'6-9	67.25	2.7	4.1	intergenic	not near genes	chr2L_15_16115001	chr2L_16115001	0.40	RAL-531
73	chr2L	16198767	16198857	roo	407	8693	15	90	'9-6	67.62	4.7	2.6	intergenic	not near genes	chr2L_15_16195001	chr2L_16195001	0.60	RAL-531
74	chr2L	16805799	16805899	mdg3	5495	5260	15	100	'8-7	64.96	4.0	3.0	intron,intron	CG13280 -,CG13272 +	chr2L_15_16805001	chr2L_16805001	0.53	RAL-531
75	chr2L	16812984	16813029	F-element	22	12	9	45	'4-5	64.68	5.6	1.4	intron,intron	CG13280 -,CG13272 +	chr2L_9_16810001	chr2L_16810001	0.44	RAL-531
76	chr2L	16851562	16851654	Juan	327	4205	15	92	'4-11	56.30	7.3	1.8	intron	CG31810 -	chr2L_15_16850001	chr2L_16850001	0.27	RAL-531
77	chr2L	17156604	17156719	mdg3	247	5253	18	115	'7-11	68.13	4.1	3.5	intron,intron	CG34106 +,beat-IIIa +	chr2L_18_17155001	chr2L_17155001	0.39	RAL-531
78	chr2L	17214876	17214927	Doc	215	169	15	51	'6-9	69.62	4.6	2.7	intron	beat-IIIc -	chr2L_15_17210001	chr2L_17210001	0.40	RAL-531
79	chr2L	17288639	17288738	Transpac	7	296	12	99	'6-6	66.25	4.0	2.4	intergenic	not near genes	chr2L_12_17285001	chr2L_17285001	0.50	RAL-531
80	chr2L	17983491	17983590	mdg1	409	10	18	99	'12-6	63.45	4.8	3.1	intergenic	not near genes	chr2L_18_17980001	chr2L_17980001	0.67	RAL-531
81	chr2L	17989236	17989339	roo	8667	395	18	103	'9-9	69.80	4.4	3.3	intergenic	not near genes	chr2L_18_17985001	chr2L_17985001	0.50	RAL-531
82	chr2L	18299838	18299869	hobo	2	33	13	31	'5-8	60.99	10.9	1.1	intergenic	not near genes	chr2L_13_18295001	chr2L_18295001	0.38	RAL-531
83	chr2L	18551969	18552015	Doc	5	39	10	46	'7-3	64.79	7.4	1.2	intron	Pde11 -	chr2L_10_18550001	chr2L_18550001	0.70	RAL-531
84	chr2L	18895129	18895240	pogo	2	2090	13	111	'8-5	64.31	6.9	1.6	5` UTR	CR44737 +	chr2L_13_18895001	chr2L_18895001	0.62	RAL-531
85	chr2L	19320441	19320532	Juan	4203	9	24	91	'14-10	62.43	7.0	3.0	intergenic	not near genes	chr2L_24_19320001	chr2L_19320001	0.58	RAL-531
86	chr2L	19459239	19459292	Doc	55	2	15	53	'3-12	63.70	9.8	1.4	intergenic	not near genes	chr2L_15_19455001	chr2L_19455001	0.20	RAL-531
87	chr2L	19562389	19562485	blood	7014	361	20	96	'10-10	66.57	5.6	3.0	exon	Tep5 +	chr2L_20_19560001	chr2L_19560001	0.50	RAL-531
88	chr2L	19599994	19600105	Burdock	6388	8	18	111	'14-4	65.26	3.4	4.1	intron	Lar +	chr2L_18_19595001	chr2L_19595001	0.78	RAL-531
89	chr2L	19731537	19731573	F-element	199	161	15	36	'9-6	63.81	8.4	1.6	3` UTR	Lar +	chr2L_15_19730001	chr2L_19730001	0.60	RAL-531
90	chr2L	20068124	20068220	roo	406	8677	9	96	'4-5	64.50	6.9	1.1	intron	bwa +	chr2L_9_20065001	chr2L_20065001	0.44	RAL-531
91	chr2L	20213595	20213629	transib2	2821	2775	8	34	'2-6	68.22	7.0	1.0	intergenic	not near genes	chr2L_8_20210001	chr2L_20210001	0.25	RAL-531
92	chr2L	20267891	20267981	jockey	18	4986	9	90	'4-5	62.31	3.9	1.8	intergenic	not near genes	chr2L_9_20265001	chr2L_20265001	0.44	RAL-531
93	chr2L	20329675	20329767	I-element	5344	2	27	92	'15-12	62.66	5.9	3.9	intron	spir +	chr2L_27_20325001	chr2L_20325001	0.56	RAL-531
94	chr2L	20429257	20429327	FB	1	20	5	70	'2-3	67.83	3.5	1.1	intron	CG31688 +	chr2L_5_20425001	chr2L_20425001	0.40	RAL-531
95	chr2L	20540102	20540215	copia	4868	247	33	113	'20-13	64.36	6.6	4.3	intergenic	CR45707 -	chr2L_33_20540001	chr2L_20540001	0.61	RAL-531
96	chr2L	20607218	20607321	mdg1	407	4	25	103	'12-13	61.98	2.3	7.6	intron,3` UTR	CR44909 -,CR43608 -	chr2L_25_20605001	chr2L_20605001	0.48	RAL-531
97	chr2L	20824951	20824996	pogo	16	16	5	45	'2-3	53.79	9.2	0.5	intron	CG9331 +	chr2L_5_20820001	chr2L_20820001	0.40	RAL-531
98	chr2L	20841946	20841985	G6	1974	2012	6	39	'2-4	63.17	9.5	0.6	intron	CG31676 +	chr2L_6_20840001	chr2L_20840001	0.33	RAL-531
99	chr2L	20862582	20862609	Doc	14	13	8	27	'2-6	58.70	11.0	0.7	intergenic	not near genes	chr2L_8_20860001	chr2L_20860001	0.25	RAL-531
100	chr2L	20939510	20939612	hopper	14	5	8	102	'3-5	61.91	5.9	1.2	intergenic	not near genes	chr2L_8_20935001	chr2L_20935001	0.38	RAL-531
101	chr2L	20959471	20959581	flea	248	4761	8	110	'6-2	63.42	5.1	1.3	intergenic	not near genes	chr2L_8_20955001	chr2L_20955001	0.75	RAL-531
102	chr2L	21031460	21031552	FB	21	4	25	92	'15-10	65.72	3.1	6.1	intron	CG42238 -	chr2L_25_21030001	chr2L_21030001	0.60	RAL-531
103	chr2L	21570226	21570273	Dm88	50	4363	19	47	'11-8	66.57	5.7	2.8	intergenic	not near genes	chr2L_19_21570001	chr2L_21570001	0.58	RAL-531
104	chr2L	21653179	21653222	gypsy	7443	7402	14	43	'6-8	61.85	8.9	1.4	intergenic	not near genes	chr2L_14_21650001	chr2L_21650001	0.43	RAL-531
105	chr2L	21689858	21689888	INE-1	535	545	5	30	'1-4	61.21	7.5	0.6	intron	CG31619 +	chr2L_5_21685001	chr2L_21685001	0.20	RAL-531
106	chr2L	21690150	21690257	roo	10	405	27	107	'11-16	65.53	6.6	3.6	intron	CG31619 +	chr2L_27_21690001	chr2L_21690001	0.41	RAL-531
107	chr2L	22119681	22119706	S-element	1634	1609	5	25	'3-2	58.42	29.3	0.2	intergenic	not near genes	chr2L_5_22115001	chr2L_22115001	0.60	RAL-531
108	chr2L	22224550	22224576	Rt1c	5393	5419	6	26	'3-3	55.63	1.2	2.7	intergenic	not near genes	chr2L_6_22220001	chr2L_22220001	0.50	RAL-531
109	chr2L	22775543	22775569	pogo	2096	2089	8	26	'5-3	65.32	4.7	1.4	intergenic	not near genes	chr2L_8_22775001	chr2L_22775001	0.62	RAL-531
110	chr2L	23295837	23295886	micropia	4962	2	13	49	'7-6	61.95	7.9	1.5	intergenic	not near genes	chr2L_13_23295001	chr2L_23295001	0.54	RAL-531
111	chr2R	640046	640131	flea	4774	5008	9	85	'2-7	68.06	13.5	0.6	intron	CG40378 +	chr2R_9_640001	chr2R_640001	0.22	RAL-531
112	chr2R	959927	959962	mdg1	51	107	10	35	'5-5	75.33	5.2	1.6	intergenic	not near genes	chr2R_10_955001	chr2R_955001	0.50	RAL-531
113	chr2R	982017	982129	gypsy	457	3	16	112	'5-11	67.44	4.4	3.0	intergenic	not near genes	chr2R_16_980001	chr2R_980001	0.31	RAL-531
114	chr2R	1570069	1570103	copia	5079	244	11	34	'5-6	63.16	7.7	1.3	intergenic	not near genes	chr2R_11_1570001	chr2R_1570001	0.45	RAL-531
115	chr2R	1650218	1650331	S-element	1712	1709	13	113	'7-6	67.24	4.8	2.2	intron	CG41520 +	chr2R_13_1650001	chr2R_1650001	0.54	RAL-531
116	chr2R	2050348	2050411	jockey	84	4985	20	63	'6-14	61.67	4.4	3.7	intron	CG17684 -	chr2R_20_2050001	chr2R_2050001	0.30	RAL-531
117	chr2R	2095417	2095461	Tabor	481	437	13	44	'4-9	63.00	7.4	1.5	intron	CG17684 -	chr2R_13_2095001	chr2R_2095001	0.31	RAL-531
118	chr2R	3138853	3138878	invader1	3942	3932	4	25	'1-3	57.80	14.6	0.3	intron	CG42596 +	chr2R_4_3135001	chr2R_3135001	0.25	RAL-531
119	chr2R	3594474	3594554	copia	4870	223	13	80	'9-4	67.08	5.5	2.0	intergenic	not near genes	chr2R_13_3590001	chr2R_3590001	0.69	RAL-531
120	chr2R	4606220	4606290	1360	3365	7	15	70	'5-10	62.82	5.9	2.2	intron	p120ctn +	chr2R_15_4605001	chr2R_4605001	0.33	RAL-531
121	chr2R	5010096	5010140	Porto1	4434	4391	7	44	'4-3	64.00	5.7	1.0	intron	Ir41a +	chr2R_7_5010001	chr2R_5010001	0.57	RAL-531
122	chr2R	5145619	5145738	roo	407	8664	46	119	'12-34	68.07	6.2	6.4	intron	Atf6 +	chr2R_46_5145001	chr2R_5145001	0.26	RAL-531
123	chr2R	5214945	5214990	F-element	11	24	9	45	'7-2	58.43	4.8	1.6	intron	Nipped-A -	chr2R_9_5210001	chr2R_5210001	0.78	RAL-531
124	chr2R	5374138	5374165	1360	8	3346	5	27	'2-3	62.59	5.3	0.8	intergenic	not near genes	chr2R_5_5370001	chr2R_5370001	0.40	RAL-531
125	chr2R	5674628	5674748	S-element	1715	7	29	120	'13-16	67.69	5.8	4.3	intergenic	not near genes	chr2R_29_5670001	chr2R_5670001	0.45	RAL-531
126	chr2R	5815188	5815227	mdg1	7043	7082	14	39	'8-6	63.47	5.2	2.3	intron	dpr12 +	chr2R_14_5815001	chr2R_5815001	0.57	RAL-531
127	chr2R	5845562	5845593	Doc	19	6	8	31	'7-1	60.51	4.6	1.4	intron	dpr12 +	chr2R_8_5845001	chr2R_5845001	0.88	RAL-531
128	chr2R	5852610	5852725	roo	8671	410	12	115	'5-7	64.78	3.0	3.0	intron	dpr12 +	chr2R_12_5850001	chr2R_5850001	0.42	RAL-531
129	chr2R	5887459	5887579	pogo	1	2098	22	120	'8-14	65.77	6.1	3.1	intergenic	not near genes	chr2R_22_5885001	chr2R_5885001	0.36	RAL-531
130	chr2R	5933002	5933078	I-element	7	5334	7	76	'2-5	60.97	5.0	1.2	intergenic	not near genes	chr2R_7_5930001	chr2R_5930001	0.29	RAL-531
131	chr2R	5936483	5936598	copia	254	4873	24	115	'10-14	63.35	7.0	3.0	intergenic	not near genes	chr2R_24_5935001	chr2R_5935001	0.42	RAL-531
132	chr2R	5953070	5953174	17.6	7417	6943	11	104	'9-2	68.00	4.9	1.9	intergenic	not near genes	chr2R_11_5950001	chr2R_5950001	0.82	RAL-531
133	chr2R	5956084	5956127	Burdock	4	6177	10	43	'3-7	68.69	10.9	0.8	intergenic	not near genes	chr2R_10_5955001	chr2R_5955001	0.30	RAL-531
134	chr2R	6086316	6086414	pogo	14	2089	20	98	'12-8	63.92	6.8	2.6	intergenic	not near genes	chr2R_20_6085001	chr2R_6085001	0.60	RAL-531
135	chr2R	6203633	6203735	Quasimodo	19	7366	10	102	'5-5	69.91	8.1	1.1	intron	CG30431 +	chr2R_10_6200001	chr2R_6200001	0.50	RAL-531
136	chr2R	6219481	6219564	S-element	37	1712	13	83	'6-7	67.21	5.2	2.1	intron	bin3 +	chr2R_13_6215001	chr2R_6215001	0.46	RAL-531
137	chr2R	6801792	6801837	hobo	2	34	8	45	'4-4	60.41	6.4	1.1	intergenic	not near genes	chr2R_8_6800001	chr2R_6800001	0.50	RAL-531
138	chr2R	6945611	6945732	pogo	2100	2	27	121	'17-10	65.68	8.3	2.9	intron,intron	mim -,CheB42c -	chr2R_27_6945001	chr2R_6945001	0.63	RAL-531
139	chr2R	6984312	6984421	HMS-Beagle2	6887	7196	14	109	'8-6	64.60	4.9	2.4	intron,intron	vimar -,CG30156 -	chr2R_14_6980001	chr2R_6980001	0.57	RAL-531
140	chr2R	7313429	7313544	412	488	1	9	115	'8-1	63.26	4.3	1.7	3` UTR	CG12164 +	chr2R_9_7310001	chr2R_7310001	0.89	RAL-531
141	chr2R	7747989	7748027	Doc	14	14	12	38	'3-9	63.82	10.3	1.1	intron,intron	CG30497 -,CG45093 -	chr2R_12_7745001	chr2R_7745001	0.25	RAL-531
142	chr2R	7879910	7879987	hopper	8	1411	7	77	'5-2	53.92	3.4	1.6	intron	Dgk -	chr2R_7_7875001	chr2R_7875001	0.71	RAL-531
143	chr2R	7959962	7960086	Burdock	6135	256	33	124	'12-21	66.74	6.5	4.4	intron	CG2915 -	chr2R_33_7955001	chr2R_7955001	0.36	RAL-531
144	chr2R	8086768	8086878	1360	3385	3384	23	110	'10-13	65.96	4.4	4.3	3` UTR	sut1 +	chr2R_23_8085001	chr2R_8085001	0.43	RAL-531
145	chr2R	8204791	8204902	297	6973	9	20	111	'13-7	66.13	6.8	2.6	intron	LRP1 +	chr2R_20_8200001	chr2R_8200001	0.65	RAL-531
146	chr2R	8278574	8278686	copia	247	4868	25	112	'8-17	63.89	7.0	3.1	intergenic	not near genes	chr2R_25_8275001	chr2R_8275001	0.32	RAL-531
147	chr2R	8527823	8527907	R1A1-element	4895	5320	9	84	'5-4	59.92	4.4	1.7	intron	mtt -	chr2R_9_8525001	chr2R_8525001	0.56	RAL-531
148	chr2R	8642881	8642984	Doc2-element	4767	4696	18	103	'9-9	63.16	5.3	2.9	intergenic	not near genes	chr2R_18_8640001	chr2R_8640001	0.50	RAL-531
149	chr2R	8692543	8692654	Stalker2	7254	399	28	111	'17-11	62.60	6.4	3.8	3` UTR	Jon44E +	chr2R_28_8690001	chr2R_8690001	0.61	RAL-531
150	chr2R	8714573	8714666	1360	3379	3378	23	93	'8-15	68.57	4.6	4.1	3` UTR	PGRP-SC1b +	chr2R_23_8710001	chr2R_8710001	0.35	RAL-531
151	chr2R	9219349	9219383	roo	9028	8681	6	34	'2-4	69.03	2.0	2.0	intergenic	not near genes	chr2R_6_9215001	chr2R_9215001	0.33	RAL-531
152	chr2R	9275261	9275373	roo	401	8665	28	112	'10-18	67.16	7.7	3.2	intron	Pkn -	chr2R_28_9275001	chr2R_9275001	0.36	RAL-531
153	chr2R	9411370	9411568	roo	405	8664	22	198	'14-8	68.73	3.5	4.9	intron	wun -	chr2R_22_9410001	chr2R_9410001	0.64	RAL-531
154	chr2R	9644258	9644340	blood	351	7021	21	82	'2-19	70.05	2.5	6.0	intron	Mmp2 -	chr2R_21_9640001	chr2R_9640001	0.10	RAL-531
155	chr2R	9870994	9871074	roo	399	8678	15	80	'7-8	65.58	5.9	2.2	intron	cbx -	chr2R_15_9870001	chr2R_9870001	0.47	RAL-531
156	chr2R	10130603	10130649	F-element	4626	4672	8	46	'5-3	67.52	6.3	1.1	intron	gem +	chr2R_8_10130001	chr2R_10130001	0.62	RAL-531
157	chr2R	10193189	10193304	Idefix	7387	2	15	115	'7-8	70.09	8.4	1.6	intergenic	not near genes	chr2R_15_10190001	chr2R_10190001	0.47	RAL-531
158	chr2R	10392996	10393052	jockey	4731	4768	12	56	'7-5	65.51	9.6	1.1	intron	CG42732 -	chr2R_12_10390001	chr2R_10390001	0.58	RAL-531
159	chr2R	10549070	10549184	297	6972	4	19	114	'10-9	72.22	7.4	2.3	intergenic	not near genes	chr2R_19_10545001	chr2R_10545001	0.53	RAL-531
160	chr2R	10899077	10899105	jockey	4795	4783	10	28	'3-7	60.71	7.1	1.2	intergenic	Rpb5 -	chr2R_10_10895001	chr2R_10895001	0.30	RAL-531
161	chr2R	10916233	10916353	Stalker2	7247	7649	34	120	'20-14	67.04	5.0	5.7	intergenic	not near genes	chr2R_34_10915001	chr2R_10915001	0.59	RAL-531
162	chr2R	10932710	10932802	412	7541	7076	14	92	'4-10	63.41	2.8	3.7	intergenic	not near genes	chr2R_14_10930001	chr2R_10930001	0.29	RAL-531
163	chr2R	10956873	10956995	copia	4867	256	34	122	'11-23	65.21	6.9	4.3	intergenic	not near genes	chr2R_34_10955001	chr2R_10955001	0.32	RAL-531
164	chr2R	11027991	11028047	opus	5	7497	9	56	'4-5	66.42	5.5	1.4	intron	luna -	chr2R_9_11025001	chr2R_11025001	0.44	RAL-531
165	chr2R	11130858	11130892	F-element	12	46	7	34	'4-3	52.87	10.0	0.6	intergenic	not near genes	chr2R_7_11130001	chr2R_11130001	0.57	RAL-531
166	chr2R	11218899	11218999	Tirant	403	8108	17	100	'11-6	63.99	5.4	2.7	intron	CG9084 -	chr2R_17_11215001	chr2R_11215001	0.65	RAL-531
167	chr2R	11356129	11356159	I-element	5307	5338	13	30	'5-8	62.07	0.7	7.6	3` UTR	CG13202 -	chr2R_13_11355001	chr2R_11355001	0.38	RAL-531
168	chr2R	11419483	11419588	Transpac	5212	4918	15	105	'7-8	61.73	3.6	3.3	intron	Drip -	chr2R_15_11415001	chr2R_11415001	0.47	RAL-531
169	chr2R	11659039	11659146	1360	1	3379	27	107	'18-9	66.06	6.3	3.7	intron	Roc2 -	chr2R_27_11655001	chr2R_11655001	0.67	RAL-531
170	chr2R	11701051	11701168	roo	8666	407	28	117	'17-11	70.19	7.1	3.5	exon	Ir48b -	chr2R_28_11700001	chr2R_11700001	0.61	RAL-531
171	chr2R	11753938	11754046	pogo	2090	7	9	108	'2-7	64.48	6.7	1.2	intergenic	not near genes	chr2R_9_11750001	chr2R_11750001	0.22	RAL-531
172	chr2R	11847352	11847378	F-element	23	23	5	26	'3-2	57.40	7.8	0.6	intron	Sln +	chr2R_5_11845001	chr2R_11845001	0.60	RAL-531
173	chr2R	12185313	12185421	accord	7377	7	13	108	'7-6	64.58	9.6	1.2	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_13_12185001	chr2R_12185001	0.54	RAL-531
174	chr2R	12336624	12336673	pogo	21	3	12	49	'6-6	67.80	5.3	1.9	intergenic	CG34021 +,CG8490 +	chr2R_12_12335001	chr2R_12335001	0.50	RAL-531
175	chr2R	12369651	12369687	I-element	5349	5311	9	36	'4-5	66.72	8.7	0.9	exon	CG33012 +	chr2R_9_12365001	chr2R_12365001	0.44	RAL-531
176	chr2R	12431439	12431538	blood	3	379	26	99	'16-10	65.70	6.9	3.3	intergenic	DUBAI -,CG43204 +,Nup54 -	chr2R_26_12430001	chr2R_12430001	0.62	RAL-531
177	chr2R	12534519	12534621	FB	10	2	16	102	'8-8	60.85	4.3	3.0	intron	fra +	chr2R_16_12530001	chr2R_12530001	0.50	RAL-531
178	chr2R	12802128	12802248	flea	4755	256	20	120	'10-10	63.19	5.6	3.0	intergenic	sca +	chr2R_20_12800001	chr2R_12800001	0.50	RAL-531
179	chr2R	12810043	12810139	roo	404	10	18	96	'12-6	65.83	3.7	3.8	intergenic	not near genes	chr2R_18_12810001	chr2R_12810001	0.67	RAL-531
180	chr2R	12953108	12953214	opus	488	6	17	106	'7-10	65.33	5.7	2.5	intergenic	CG13321 +	chr2R_17_12950001	chr2R_12950001	0.41	RAL-531
181	chr2R	13258914	13258962	gypsy	24	1	14	48	'7-7	62.06	2.4	4.1	intergenic	CG10799 +	chr2R_14_13255001	chr2R_13255001	0.50	RAL-531
182	chr2R	13275426	13275541	Tabor	6	485	20	115	'18-2	64.68	6.3	2.7	intron	Dh31-R -	chr2R_20_13275001	chr2R_13275001	0.90	RAL-531
183	chr2R	13696127	13696207	copia	37	254	18	80	'7-11	64.01	3.5	4.0	intron	fas +	chr2R_18_13695001	chr2R_13695001	0.39	RAL-531
184	chr2R	13788180	13788289	copia	245	4870	31	109	'15-16	65.40	3.3	7.2	intergenic	Cpr50Ca +	chr2R_31_13785001	chr2R_13785001	0.48	RAL-531
185	chr2R	14078317	14078428	hopper	1412	1408	15	111	'9-6	65.40	5.2	2.4	intron	Prosap -	chr2R_15_14075001	chr2R_14075001	0.60	RAL-531
186	chr2R	14926116	14926211	1360	1	3367	13	95	'8-5	65.71	2.3	3.9	intron	CG10249 -	chr2R_13_14925001	chr2R_14925001	0.62	RAL-531
187	chr2R	15092043	15092094	412	443	494	11	51	'4-7	66.16	3.1	2.7	5` UTR	CR44457 +	chr2R_11_15090001	chr2R_15090001	0.36	RAL-531
188	chr2R	15374747	15374796	1360	5	223	8	49	'4-4	52.64	5.3	1.3	intergenic	not near genes	chr2R_8_15370001	chr2R_15370001	0.50	RAL-531
189	chr2R	16123116	16123168	opus	113	49	6	52	'4-2	71.45	3.8	1.2	intergenic	Jhe +,CG30095 +	chr2R_6_16120001	chr2R_16120001	0.67	RAL-531
190	chr2R	16297273	16297384	opus	492	5	8	111	'5-3	66.38	5.0	1.3	intergenic	Atg9 +,CG43265 -	chr2R_8_16295001	chr2R_16295001	0.62	RAL-531
191	chr2R	16373978	16374073	hopper	7	19	9	95	'4-5	66.01	5.6	1.4	intergenic	not near genes	chr2R_9_16370001	chr2R_16370001	0.44	RAL-531
192	chr2R	16460476	16460615	invader3	5186	278	34	139	'19-15	63.86	2.6	9.4	intergenic	not near genes	chr2R_34_16460001	chr2R_16460001	0.56	RAL-531
193	chr2R	16507003	16507108	297	394	15	13	105	'9-4	64.80	3.6	2.8	intron	Sema-2a +	chr2R_13_16505001	chr2R_16505001	0.69	RAL-531
194	chr2R	17200981	17201071	Juan	4034	4205	28	90	'10-18	60.27	4.9	4.7	intergenic	not near genes	chr2R_28_17200001	chr2R_17200001	0.36	RAL-531
195	chr2R	17268758	17268840	FB	11	1	13	82	'6-7	55.86	5.6	2.0	intron	mbl +	chr2R_13_17265001	chr2R_17265001	0.46	RAL-531
196	chr2R	17422118	17422182	P-element	2881	2870	13	64	'5-8	44.23	6.8	1.7	intron	l(2)k01209 +	chr2R_13_17420001	chr2R_17420001	0.38	RAL-531
197	chr2R	17718314	17718432	S-element	1714	1712	25	118	'20-5	68.05	5.3	4.0	intron	CG6424 -	chr2R_25_17715001	chr2R_17715001	0.80	RAL-531
198	chr2R	18106427	18106545	pogo	3	2100	13	118	'10-3	66.47	8.5	1.4	intron	CG5756 -	chr2R_13_18105001	chr2R_18105001	0.77	RAL-531
199	chr2R	18807875	18807914	BS	5046	5085	19	39	'10-9	63.78	4.0	3.8	intergenic	CG15096 -	chr2R_19_18805001	chr2R_18805001	0.53	RAL-531
200	chr2R	18985346	18985446	roo	5	395	22	100	'12-10	64.70	7.0	2.8	intergenic	not near genes	chr2R_22_18985001	chr2R_18985001	0.55	RAL-531
201	chr2R	19214240	19214338	hopper	4	5	4	98	'1-3	62.79	4.6	0.7	intron	hppy +	chr2R_4_19210001	chr2R_19210001	0.25	RAL-531
202	chr2R	19543101	19543198	412	9	488	18	97	'10-8	62.44	4.4	3.3	intron	sm -	chr2R_18_19540001	chr2R_19540001	0.56	RAL-531
203	chr2R	20164473	20164591	pogo	2099	4	10	118	'3-7	66.82	7.1	1.2	intergenic	not near genes	chr2R_10_20160001	chr2R_20160001	0.30	RAL-531
204	chr2R	20414866	20414957	412	7543	26	7	91	'3-4	65.36	3.5	1.6	intergenic	not near genes	chr2R_7_20410001	chr2R_20410001	0.43	RAL-531
205	chr2R	21142734	21142843	1360	4	3383	22	109	'13-9	65.99	2.3	6.7	exon	CG9406 +	chr2R_22_21140001	chr2R_21140001	0.59	RAL-531
206	chr2R	21199683	21199765	jockey	9	4980	13	82	'12-1	59.82	2.5	3.7	intergenic	Lapsyn +	chr2R_13_21195001	chr2R_21195001	0.92	RAL-531
207	chr2R	21206156	21206253	hopper	1407	15	15	97	'6-9	66.22	3.2	3.6	intron,intron	CG44245 +,Glycogenin +	chr2R_15_21205001	chr2R_21205001	0.40	RAL-531
208	chr2R	21231448	21231493	G6	1710	1705	4	45	'3-1	61.01	2.8	1.1	intron	ASPP -	chr2R_4_21230001	chr2R_21230001	0.75	RAL-531
209	chr2R	21465119	21465173	jockey	4	8	10	54	'5-5	67.38	5.9	1.4	intron	Sdc -	chr2R_10_21465001	chr2R_21465001	0.50	RAL-531
210	chr2R	21939075	21939192	blood	7386	7012	19	117	'12-7	65.70	6.4	2.6	intron	Fili +	chr2R_19_21935001	chr2R_21935001	0.63	RAL-531
211	chr2R	21951733	21951849	roo	8663	403	24	116	'11-13	64.39	6.8	3.1	intron	CG13488 +	chr2R_24_21950001	chr2R_21950001	0.46	RAL-531
212	chr2R	22316588	22316620	jockey	4846	4814	7	32	'4-3	52.03	1.4	2.9	5` UTR	CR44758 +	chr2R_7_22315001	chr2R_22315001	0.57	RAL-531
213	chr2R	22357697	22357817	diver	5890	226	16	120	'13-3	64.13	8.1	1.8	intron	Liprin-gamma -	chr2R_16_22355001	chr2R_22355001	0.81	RAL-531
214	chr2R	22445801	22445837	springer	24	7505	8	36	'7-1	69.97	3.5	1.8	intergenic	not near genes	chr2R_8_22445001	chr2R_22445001	0.88	RAL-531
215	chr2R	22465210	22465235	hobo	30	6	7	25	'4-3	61.22	5.5	1.1	intron	CG10384 +	chr2R_7_22465001	chr2R_22465001	0.57	RAL-531
216	chr2R	22579811	22579932	mdg1	7037	7459	17	121	'12-5	70.17	3.4	3.9	intron	dnr1 -	chr2R_17_22575001	chr2R_22575001	0.71	RAL-531
217	chr2R	22723564	22723596	roo	8663	28	6	32	'3-3	64.23	6.6	0.8	intron	jbug -	chr2R_6_22720001	chr2R_22720001	0.50	RAL-531
218	chr2R	23268648	23268685	412	7073	11	4	37	'2-2	59.50	2.5	1.1	intergenic	not near genes	chr2R_4_23265001	chr2R_23265001	0.50	RAL-531
219	chr2R	23580859	23580920	P-element	2	2	4	61	'2-2	51.74	5.7	0.6	intron	apt +	chr2R_4_23580001	chr2R_23580001	0.50	RAL-531
220	chr2R	23730778	23730877	blood	7389	7017	18	99	'13-5	62.91	6.2	2.5	intron	Sesn +	chr2R_18_23730001	chr2R_23730001	0.72	RAL-531
221	chr2R	24337737	24337852	roo	410	8671	22	115	'14-8	68.51	4.8	3.8	intergenic	not near genes	chr2R_22_24335001	chr2R_24335001	0.64	RAL-531
222	chr2R	24595793	24595838	Doc	5	14	11	45	'7-4	67.92	5.6	1.7	intron	pio +	chr2R_11_24595001	chr2R_24595001	0.64	RAL-531
223	chr2R	24679441	24679485	jockey	4803	4762	9	44	'6-3	60.22	4.3	1.7	intron	Mmp1 -	chr2R_9_24675001	chr2R_24675001	0.67	RAL-531
224	chr2R	24799833	24799879	Ivk	5328	5374	12	46	'6-6	66.25	5.2	1.9	3` UTR	CG3611 +	chr2R_12_24795001	chr2R_24795001	0.50	RAL-531
225	chr2R	25106258	25106369	Burdock	245	6137	21	111	'6-15	64.69	6.7	2.7	intron	lov -	chr2R_21_25105001	chr2R_25105001	0.29	RAL-531
226	chr2R	25203750	25203795	1360	3385	2	9	45	'8-1	64.33	6.7	1.2	intron	CG9380 -	chr2R_9_25200001	chr2R_25200001	0.89	RAL-531
227	chr3L	64143	64252	roo	9	406	22	109	'10-12	66.62	5.8	3.2	intergenic	not near genes	chr3L_22_60001	chr3L_60001	0.45	RAL-531
228	chr3L	166562	166675	roo	401	8664	27	113	'10-17	67.04	4.9	4.6	intron	p130CAS +	chr3L_27_165001	chr3L_165001	0.37	RAL-531
229	chr3L	428193	428373	TART-C	11034	11034	4	180	'3-1	50.18	2.2	1.2	intergenic	not near genes	chr3L_4_425001	chr3L_425001	0.75	RAL-531
230	chr3L	1163911	1163938	I-element	2	17	6	27	'2-4	58.95	6.8	0.8	intron	bab2 -	chr3L_6_1160001	chr3L_1160001	0.33	RAL-531
231	chr3L	1488819	1488861	jockey	4670	4693	6	42	'1-5	60.55	12.9	0.4	intron,5` UTR	stet -,CR43701 +	chr3L_6_1485001	chr3L_1485001	0.17	RAL-531
232	chr3L	1545136	1545237	roo	8663	390	19	101	'6-13	62.28	6.4	2.6	intron	CG32313 -	chr3L_19_1545001	chr3L_1545001	0.32	RAL-531
233	chr3L	1550278	1550373	Juan	4028	4204	23	95	'14-9	59.26	4.2	4.4	intron	Cct1 +	chr3L_23_1550001	chr3L_1550001	0.61	RAL-531
234	chr3L	2397826	2397922	roo	2	394	7	96	'3-4	66.06	5.7	1.0	intron	CG45186 +	chr3L_7_2395001	chr3L_2395001	0.43	RAL-531
235	chr3L	3476142	3476229	Idefix	6	7367	10	87	'5-5	66.48	5.2	1.6	intron	CG42324 +	chr3L_10_3475001	chr3L_3475001	0.50	RAL-531
236	chr3L	3555467	3555583	roo	407	1	36	116	'22-14	69.03	6.0	5.1	intron	Eip63E +	chr3L_36_3555001	chr3L_3555001	0.61	RAL-531
237	chr3L	3953961	3954049	copia	251	4897	24	88	'18-6	71.52	4.5	4.4	intergenic	CG12605 -	chr3L_24_3950001	chr3L_3950001	0.75	RAL-531
238	chr3L	4117973	4118087	297	6971	2	15	114	'8-7	66.39	4.0	3.0	intron	Chd64 -	chr3L_15_4115001	chr3L_4115001	0.53	RAL-531
239	chr3L	4735300	4735366	roo	45	403	6	66	'4-2	68.69	1.5	2.4	intron	RhoGEF64C +	chr3L_6_4735001	chr3L_4735001	0.67	RAL-531
240	chr3L	5491625	5491702	1731	4313	294	24	77	'16-8	66.12	8.7	2.5	intergenic	not near genes	chr3L_24_5490001	chr3L_5490001	0.67	RAL-531
241	chr3L	5538085	5538130	jockey	4764	4805	15	45	'7-8	64.76	3.4	3.4	intergenic	CG10625 -	chr3L_15_5535001	chr3L_5535001	0.47	RAL-531
242	chr3L	6215898	6216017	Burdock	256	3	29	119	'22-7	68.03	5.1	4.8	intron	LanA -	chr3L_29_6215001	chr3L_6215001	0.76	RAL-531
243	chr3L	6271376	6271470	mdg1	7459	26	20	94	'10-10	67.84	8.3	2.2	intergenic	not near genes	chr3L_20_6270001	chr3L_6270001	0.50	RAL-531
244	chr3L	6364327	6364419	mdg1	7448	17	18	92	'10-8	65.82	4.1	3.5	intergenic	not near genes	chr3L_18_6360001	chr3L_6360001	0.56	RAL-531
245	chr3L	6498310	6498418	copia	248	4868	11	108	'7-4	63.30	2.5	3.1	intron	sfl +	chr3L_11_6495001	chr3L_6495001	0.64	RAL-531
246	chr3L	6934300	6934478	roo	8665	414	33	178	'21-12	64.50	3.6	7.2	exon	CG14820 +	chr3L_33_6930001	chr3L_6930001	0.64	RAL-531
247	chr3L	7299300	7299377	roo	394	8686	18	77	'9-9	65.55	4.0	3.6	intron	unc-13-4A -	chr3L_18_7295001	chr3L_7295001	0.50	RAL-531
248	chr3L	7911535	7911647	P-element	1	2	23	112	'14-9	56.30	3.9	4.7	5` UTR	pbl -	chr3L_23_7910001	chr3L_7910001	0.61	RAL-531
249	chr3L	7997853	7997938	jockey	18	4979	20	85	'5-15	56.96	4.4	3.7	intron	nmo +	chr3L_20_7995001	chr3L_7995001	0.25	RAL-531
250	chr3L	8788872	8788915	roo	406	364	6	43	'4-2	70.45	14.7	0.4	intron	Fhos +	chr3L_6_8785001	chr3L_8785001	0.67	RAL-531
251	chr3L	8945324	8945441	blood	7387	7011	14	117	'1-13	66.99	2.7	3.8	intron,intron	CG43783 -,orb2 -	chr3L_14_8945001	chr3L_8945001	0.07	RAL-531
252	chr3L	9615679	9615712	I-element	5343	5305	11	33	'3-8	66.87	6.4	1.5	intron	LanB2 +	chr3L_11_9615001	chr3L_9615001	0.27	RAL-531
253	chr3L	9717688	9717765	blood	7364	7030	16	77	'5-11	63.37	6.6	2.1	3` UTR	vsg +	chr3L_16_9715001	chr3L_9715001	0.31	RAL-531
254	chr3L	9857479	9857598	copia	4872	257	36	119	'17-19	67.19	6.3	4.9	3` UTR	CG10809 -	chr3L_36_9855001	chr3L_9855001	0.47	RAL-531
255	chr3L	9858238	9858347	pogo	6	2092	13	109	'4-9	62.39	4.3	2.5	intron	CG10809 -	chr3L_13_9855001	chr3L_9855001	0.31	RAL-531
256	chr3L	9888733	9888778	P-element	6	41	9	45	'3-6	36.07	2.0	3.0	intergenic	CalpB +,Taf2 -	chr3L_9_9885001	chr3L_9885001	0.33	RAL-531
257	chr3L	10803009	10803098	412	12	483	10	89	'7-3	56.94	6.6	1.3	intergenic	not near genes	chr3L_10_10800001	chr3L_10800001	0.70	RAL-531
258	chr3L	10811545	10811583	Juan	4207	4169	13	38	'9-4	63.44	7.2	1.6	intergenic	not near genes	chr3L_13_10810001	chr3L_10810001	0.69	RAL-531
259	chr3L	11089379	11089497	Transpac	4	310	31	118	'18-13	64.48	3.6	6.7	intron	JIL-1 -	chr3L_31_11085001	chr3L_11085001	0.58	RAL-531
260	chr3L	11196295	11196400	FB	7	4	26	105	'12-14	63.43	5.8	3.8	intron	GlcAT-P -	chr3L_26_11195001	chr3L_11195001	0.46	RAL-531
261	chr3L	11360139	11360234	17.6	489	7	9	95	'1-8	65.21	4.0	1.8	intergenic	not near genes	chr3L_9_11360001	chr3L_11360001	0.11	RAL-531
262	chr3L	11590243	11590362	roo	408	1	8	119	'4-4	72.50	8.4	0.9	intergenic	CG7377 +	chr3L_8_11590001	chr3L_11590001	0.50	RAL-531
263	chr3L	12300113	12300144	1360	5	42	12	31	'8-4	63.32	4.2	2.3	intergenic	not near genes	chr3L_12_12300001	chr3L_12300001	0.67	RAL-531
264	chr3L	12683785	12683906	Burdock	254	6136	20	121	'7-13	60.53	4.9	3.4	intergenic	not near genes	chr3L_20_12680001	chr3L_12680001	0.35	RAL-531
265	chr3L	13471095	13471204	roo	5	403	29	109	'9-20	66.31	7.6	3.4	intron	CG10089 -	chr3L_29_13470001	chr3L_13470001	0.31	RAL-531
266	chr3L	13498759	13498882	Burdock	6388	6137	16	123	'2-14	63.24	1.0	8.0	intron	Tgi +	chr3L_16_13495001	chr3L_13495001	0.12	RAL-531
267	chr3L	14093591	14093712	pogo	3	2093	5	121	'3-2	62.88	1.7	1.9	intergenic	not near genes	chr3L_5_14090001	chr3L_14090001	0.60	RAL-531
268	chr3L	14200539	14200660	roo	411	8666	27	121	'13-14	69.27	6.7	3.5	intron	nuf +	chr3L_27_14200001	chr3L_14200001	0.48	RAL-531
269	chr3L	14212455	14212482	jockey	8	11	5	27	'3-2	62.30	6.1	0.7	intron	nuf +	chr3L_5_14210001	chr3L_14210001	0.60	RAL-531
270	chr3L	14585797	14585943	Tc1	113	137	12	146	'6-6	51.75	2.2	3.8	intron	HGTX -	chr3L_12_14585001	chr3L_14585001	0.50	RAL-531
271	chr3L	14627086	14627190	Juan	4026	4210	43	104	'23-20	62.22	5.8	6.3	exon	CG9628 +	chr3L_43_14625001	chr3L_14625001	0.53	RAL-531
272	chr3L	14822830	14822929	mdg1	7447	8	20	99	'8-12	62.39	5.1	3.3	intron	CG17839 +	chr3L_20_14820001	chr3L_14820001	0.40	RAL-531
273	chr3L	14854665	14854779	rover	6951	7290	19	114	'10-9	66.61	7.5	2.2	intron	CG17839 +	chr3L_19_14850001	chr3L_14850001	0.53	RAL-531
274	chr3L	14909900	14909995	Juan	4207	4080	7	95	'1-6	65.41	5.5	1.1	intron	DCX-EMAP +	chr3L_7_14905001	chr3L_14905001	0.14	RAL-531
275	chr3L	14948540	14948658	opus	499	3	8	118	'7-1	73.25	7.4	1.0	intergenic	not near genes	chr3L_8_14945001	chr3L_14945001	0.88	RAL-531
276	chr3L	15035125	15035226	pogo	2081	3	21	101	'7-14	68.13	4.9	3.6	intron	Sytbeta -	chr3L_21_15035001	chr3L_15035001	0.33	RAL-531
277	chr3L	15105155	15105278	S-element	1	1712	17	123	'6-11	66.02	2.7	4.6	intron	CTPsyn +	chr3L_17_15105001	chr3L_15105001	0.35	RAL-531
278	chr3L	15466952	15467026	Tc3	312	240	4	74	'1-3	62.89	7.6	0.5	intergenic	not near genes	chr3L_4_15465001	chr3L_15465001	0.25	RAL-531
279	chr3L	16035381	16035492	rover	6963	348	24	111	'11-13	64.71	3.3	5.6	intergenic	CG5895 +	chr3L_24_16035001	chr3L_16035001	0.46	RAL-531
280	chr3L	16392158	16392247	Juan	5	4195	17	89	'9-8	60.39	6.6	2.2	intron	CG44836 -	chr3L_17_16390001	chr3L_16390001	0.53	RAL-531
281	chr3L	16554704	16554765	hobo	2912	9	12	61	'7-5	65.87	3.6	2.6	intergenic	not near genes	chr3L_12_16550001	chr3L_16550001	0.58	RAL-531
282	chr3L	16700054	16700148	roo	8662	386	14	94	'9-5	67.70	4.2	2.7	intron,intron	Lasp -,CG43954 -	chr3L_14_16700001	chr3L_16700001	0.64	RAL-531
283	chr3L	16756148	16756209	diver	183	1	23	61	'9-14	67.81	5.4	3.6	intergenic	CG42852 +	chr3L_23_16755001	chr3L_16755001	0.39	RAL-531
284	chr3L	16973357	16973470	S-element	1523	1712	27	113	'14-13	61.92	6.6	3.6	intron	Exn +	chr3L_27_16970001	chr3L_16970001	0.52	RAL-531
285	chr3L	17129684	17129728	HMS-Beagle2	306	7165	9	44	'4-5	70.22	7.4	1.1	intron	Rbp6 -	chr3L_9_17125001	chr3L_17125001	0.44	RAL-531
286	chr3L	17254049	17254147	hobo	22	2708	7	98	'5-2	58.78	3.3	1.6	intron	CR43870 +	chr3L_7_17250001	chr3L_17250001	0.71	RAL-531
287	chr3L	17431052	17431170	roo	404	8663	18	118	'10-8	66.56	6.2	2.5	intron,3` UTR	CG32174 -,frc -	chr3L_18_17430001	chr3L_17430001	0.56	RAL-531
288	chr3L	17503195	17503239	pogo	35	1	13	44	'8-5	67.81	7.1	1.6	intron	Oatp74D +	chr3L_13_17500001	chr3L_17500001	0.62	RAL-531
289	chr3L	17783897	17783994	springer	21	382	10	97	'4-6	64.44	3.6	2.2	intergenic	not near genes	chr3L_10_17780001	chr3L_17780001	0.40	RAL-531
290	chr3L	18069374	18069461	roo	22	401	20	87	'9-11	69.66	6.6	2.6	exon	CG44006 -	chr3L_20_18065001	chr3L_18065001	0.45	RAL-531
291	chr3L	18152623	18152721	I-element	5	5346	23	98	'11-12	64.38	5.7	3.4	intron	CG7330 +	chr3L_23_18150001	chr3L_18150001	0.48	RAL-531
292	chr3L	18235094	18235141	jockey	4755	4782	5	47	'2-3	72.39	8.1	0.5	intergenic	not near genes	chr3L_5_18235001	chr3L_18235001	0.40	RAL-531
293	chr3L	18397056	18397101	mdg1	42	7085	4	45	'3-1	69.47	7.0	0.5	intergenic	rpr -	chr3L_4_18395001	chr3L_18395001	0.75	RAL-531
294	chr3L	18419351	18419458	jockey	4675	4987	22	107	'3-19	60.62	4.4	4.1	intergenic	not near genes	chr3L_22_18415001	chr3L_18415001	0.14	RAL-531
295	chr3L	18680903	18681019	roo	5	411	36	116	'17-19	67.77	6.8	4.6	intergenic	CG34254 +,Sgf11 -	chr3L_36_18680001	chr3L_18680001	0.47	RAL-531
296	chr3L	18737194	18737236	X-element	4676	4710	8	42	'4-4	62.40	1.8	2.9	intergenic	not near genes	chr3L_8_18735001	chr3L_18735001	0.50	RAL-531
297	chr3L	19217061	19217087	F-element	14	28	8	26	'3-5	54.26	4.7	1.4	intron	fz2 -	chr3L_8_19215001	chr3L_19215001	0.38	RAL-531
298	chr3L	19274787	19274898	transib2	8	2822	24	111	'13-11	61.56	4.0	4.8	intergenic	not near genes	chr3L_24_19270001	chr3L_19270001	0.54	RAL-531
299	chr3L	19339396	19339438	Tc1	39	11	7	42	'3-4	62.56	6.7	0.9	intergenic	not near genes	chr3L_7_19335001	chr3L_19335001	0.43	RAL-531
300	chr3L	19382277	19382374	mdg3	5251	241	19	97	'8-11	62.96	5.9	2.8	intron	CG32206 -	chr3L_19_19380001	chr3L_19380001	0.42	RAL-531
301	chr3L	19940729	19940842	roo	405	8667	39	113	'19-20	69.83	7.3	4.7	intron	Ac76E +	chr3L_39_19940001	chr3L_19940001	0.49	RAL-531
302	chr3L	20038513	20038561	G2	2634	2677	13	48	'9-4	64.02	8.3	1.4	intergenic	not near genes	chr3L_13_20035001	chr3L_20035001	0.69	RAL-531
303	chr3L	20039842	20039884	Doc	14	3	12	42	'7-5	54.78	4.7	2.1	intergenic	not near genes	chr3L_12_20035001	chr3L_20035001	0.58	RAL-531
304	chr3L	20490656	20490752	FB	705	2	10	96	'1-9	67.55	4.3	1.9	intron	ZnT77C -	chr3L_10_20490001	chr3L_20490001	0.10	RAL-531
305	chr3L	20764602	20764682	copia	4869	5086	17	80	'13-4	64.07	6.6	2.2	intergenic	not near genes	chr3L_17_20760001	chr3L_20760001	0.76	RAL-531
306	chr3L	20873917	20874019	roo	407	8679	24	102	'21-3	64.88	7.9	2.7	intron	CG32432 -	chr3L_24_20870001	chr3L_20870001	0.88	RAL-531
307	chr3L	20992888	20992960	roo	9043	8670	20	72	'3-17	61.35	4.6	3.6	3` UTR,3` UTR	CG12984 +,skd -	chr3L_20_20990001	chr3L_20990001	0.15	RAL-531
308	chr3L	21011056	21011159	P-element	2880	7	9	103	'6-3	46.18	4.4	1.7	intron	skd -	chr3L_9_21010001	chr3L_21010001	0.67	RAL-531
309	chr3L	21145345	21145371	BS	5057	5083	9	26	'5-4	62.22	10.1	0.8	intron	Ac78C -	chr3L_9_21145001	chr3L_21145001	0.56	RAL-531
310	chr3L	21145689	21145723	INE-1	556	561	7	34	'3-4	57.90	2.3	2.1	intron	Ac78C -	chr3L_7_21145001	chr3L_21145001	0.43	RAL-531
311	chr3L	21362983	21363012	INE-1	138	145	4	29	'3-1	58.26	0.4	2.9	intergenic	not near genes	chr3L_4_21360001	chr3L_21360001	0.75	RAL-531
312	chr3L	22174810	22174926	roo	405	8665	22	116	'5-17	67.61	4.1	4.3	intron	olf413 +	chr3L_22_22170001	chr3L_22170001	0.23	RAL-531
313	chr3L	22215470	22215534	hobo	2912	9	6	64	'2-4	60.76	3.5	1.3	intron	olf413 +	chr3L_6_22215001	chr3L_22215001	0.33	RAL-531
314	chr3L	22636721	22636806	jockey	4987	4669	17	85	'3-14	62.23	7.2	2.1	intron	CG14459 -	chr3L_17_22635001	chr3L_22635001	0.18	RAL-531
315	chr3L	22744680	22744717	FB	25	18	7	37	'2-5	71.05	6.6	0.9	intron	CG7369 +	chr3L_7_22740001	chr3L_22740001	0.29	RAL-531
316	chr3L	22760365	22760395	F-element	94	124	8	30	'3-5	58.77	6.5	1.1	intron	SPoCk +	chr3L_8_22760001	chr3L_22760001	0.38	RAL-531
317	chr3L	22907558	22907648	pogo	13	2080	23	90	'17-6	68.51	5.5	3.5	intergenic	not near genes	chr3L_23_22905001	chr3L_22905001	0.74	RAL-531
318	chr3L	22944803	22944853	jockey	4760	4800	7	50	'3-4	65.93	8.1	0.8	intergenic	not near genes	chr3L_7_22940001	chr3L_22940001	0.43	RAL-531
319	chr3L	22962752	22962865	Burdock	246	6137	25	113	'13-12	67.75	5.4	3.9	intergenic	not near genes	chr3L_25_22960001	chr3L_22960001	0.52	RAL-531
320	chr3L	23146469	23146516	1360	8	55	16	47	'13-3	63.28	7.1	2.0	intergenic	not near genes	chr3L_16_23145001	chr3L_23145001	0.81	RAL-531
321	chr3L	23354613	23354652	gypsy2	6495	31	15	39	'7-8	62.85	8.0	1.7	intergenic	not near genes	chr3L_15_23350001	chr3L_23350001	0.47	RAL-531
322	chr3L	24213772	24213804	invader2	5087	5055	6	32	'5-1	60.49	6.6	0.8	intron	Snap25 +	chr3L_6_24210001	chr3L_24210001	0.83	RAL-531
323	chr3L	26371119	26371202	S-element	1699	1	10	83	'1-9	70.56	5.4	1.6	intron	CG42598 -	chr3L_10_26370001	chr3L_26370001	0.10	RAL-531
324	chr3L	26870754	26870857	roo	7	403	21	103	'9-12	63.95	4.4	3.9	intergenic	not near genes	chr3L_21_26870001	chr3L_26870001	0.43	RAL-531
325	chr3L	27356068	27356113	Tc3	1700	1655	15	45	'5-10	74.20	8.7	1.5	intron	Dbp80 +	chr3L_15_27355001	chr3L_27355001	0.33	RAL-531
326	chr3L	27415234	27415324	transib2	2803	1	24	90	'7-17	67.99	6.6	3.2	intron	Dbp80 +	chr3L_24_27415001	chr3L_27415001	0.29	RAL-531
327	chr3R	556455	556529	Tc1-2	1594	20	4	74	'3-1	56.61	2.7	1.1	intergenic	not near genes	chr3R_4_555001	chr3R_555001	0.75	RAL-531
328	chr3R	723154	723200	gypsy6	71	58	7	46	'3-4	59.54	2.2	2.2	intergenic	not near genes	chr3R_7_720001	chr3R_720001	0.43	RAL-531
329	chr3R	2474280	2474313	Juan	4207	4174	10	33	'3-7	60.54	12.6	0.7	intergenic	not near genes	chr3R_10_2470001	chr3R_2470001	0.30	RAL-531
330	chr3R	2999769	2999852	McClintock	416	7	9	83	'2-7	65.24	4.1	1.8	intron	CG42618 -	chr3R_9_2995001	chr3R_2995001	0.22	RAL-531
331	chr3R	3626883	3627005	copia	258	4870	31	122	'13-18	67.03	21.6	1.4	intron	Alg-2 +	chr3R_31_3625001	chr3R_3625001	0.42	RAL-531
332	chr3R	4194337	4194391	Burdock	6134	6148	4	54	'2-2	65.99	3.0	1.0	intergenic	not near genes	chr3R_4_4190001	chr3R_4190001	0.50	RAL-531
333	chr3R	4549208	4549329	1731	316	4312	19	121	'8-11	65.40	7.9	2.1	intron	CG34357 -	chr3R_19_4545001	chr3R_4545001	0.42	RAL-531
334	chr3R	4553271	4553399	Juan	44	22	24	128	'12-12	61.38	3.6	5.2	intron	CG34357 -	chr3R_24_4550001	chr3R_4550001	0.50	RAL-531
335	chr3R	4554285	4554406	Bari1	1706	3	32	121	'15-17	67.11	7.1	4.0	intron	CG34357 -	chr3R_32_4550001	chr3R_4550001	0.47	RAL-531
336	chr3R	4582194	4582227	F-element	24	14	8	33	'4-4	55.79	3.7	1.7	intergenic	not near genes	chr3R_8_4580001	chr3R_4580001	0.50	RAL-531
337	chr3R	4682875	4682990	S-element	3	1710	7	115	'3-4	65.81	3.3	1.6	intron	CG43427 +	chr3R_7_4680001	chr3R_4680001	0.43	RAL-531
338	chr3R	4695199	4695320	mdg1	420	7037	29	121	'20-9	66.83	8.6	3.0	intron	CG43427 +	chr3R_29_4695001	chr3R_4695001	0.69	RAL-531
339	chr3R	4885321	4885405	1360	6	3377	9	84	'4-5	66.66	5.0	1.5	intergenic	not near genes	chr3R_9_4885001	chr3R_4885001	0.44	RAL-531
340	chr3R	4913551	4913654	1360	185	3	18	103	'4-14	64.79	5.9	2.6	intron	Cdep +	chr3R_18_4910001	chr3R_4910001	0.22	RAL-531
341	chr3R	4990679	4990729	Doc	3	18	10	50	'7-3	67.29	3.1	2.4	intron	CG2022 -	chr3R_10_4990001	chr3R_4990001	0.70	RAL-531
342	chr3R	5035659	5035707	roo	409	9024	11	48	'5-6	67.14	1.9	3.8	intergenic	not near genes	chr3R_11_5035001	chr3R_5035001	0.45	RAL-531
343	chr3R	5216459	5216494	Tirant	380	389	13	35	'6-7	67.83	4.3	2.5	intron	cno -	chr3R_13_5215001	chr3R_5215001	0.46	RAL-531
344	chr3R	5245563	5245671	1360	3386	7	28	108	'14-14	66.11	8.4	3.0	intron	CG12163 -	chr3R_28_5245001	chr3R_5245001	0.50	RAL-531
345	chr3R	5385386	5385468	FB	6	29	21	82	'11-10	63.18	4.9	3.6	intron	kkv -	chr3R_21_5385001	chr3R_5385001	0.52	RAL-531
346	chr3R	5427529	5427570	opus	495	482	12	41	'8-4	65.04	8.6	1.2	intron	CG14669 +	chr3R_12_5425001	chr3R_5425001	0.67	RAL-531
347	chr3R	5798797	5798896	pogo	4	2088	18	99	'12-6	66.12	9.2	1.8	3` UTR	CG10979 +	chr3R_18_5795001	chr3R_5795001	0.67	RAL-531
348	chr3R	5813284	5813369	S-element	1699	7	9	85	'5-4	64.48	5.1	1.5	intergenic	CG11000 +,CG42675 +	chr3R_9_5810001	chr3R_5810001	0.56	RAL-531
349	chr3R	5915205	5915414	S-element	1705	1608	17	209	'11-6	68.13	4.3	3.2	intron	CG34113 -	chr3R_17_5915001	chr3R_5915001	0.65	RAL-531
350	chr3R	6195921	6196040	Burdock	6138	6390	27	119	'12-15	63.92	6.3	3.7	intergenic	not near genes	chr3R_27_6195001	chr3R_6195001	0.44	RAL-531
351	chr3R	6270811	6270921	mdg3	5257	5492	23	110	'14-9	62.91	6.3	3.2	intergenic	not near genes	chr3R_23_6270001	chr3R_6270001	0.61	RAL-531
352	chr3R	6277618	6277652	I-element	5345	5311	9	34	'5-4	65.59	5.3	1.4	intergenic	not near genes	chr3R_9_6275001	chr3R_6275001	0.56	RAL-531
353	chr3R	6402811	6402908	FB	1	13	14	97	'6-8	61.49	5.4	2.2	intron	Dmtn -	chr3R_14_6400001	chr3R_6400001	0.43	RAL-531
354	chr3R	6434506	6434608	FB	12	1	25	102	'13-12	63.82	6.2	3.5	intron	gpp +	chr3R_25_6430001	chr3R_6430001	0.52	RAL-531
355	chr3R	6474606	6474688	P-element	8	2879	14	82	'8-6	50.30	7.4	1.7	intergenic	not near genes	chr3R_14_6470001	chr3R_6470001	0.57	RAL-531
356	chr3R	6509658	6509779	mdg3	5256	250	22	121	'10-12	65.29	5.1	3.6	intergenic	not near genes	chr3R_22_6505001	chr3R_6505001	0.45	RAL-531
357	chr3R	6594321	6594436	Bari1	1706	9	18	115	'7-11	66.40	4.3	3.4	intergenic	not near genes	chr3R_18_6590001	chr3R_6590001	0.39	RAL-531
358	chr3R	6725931	6726030	Ivk	4	5376	25	99	'12-13	61.48	6.7	3.2	intron	pb -	chr3R_25_6725001	chr3R_6725001	0.48	RAL-531
359	chr3R	6772408	6772525	412	490	1	22	117	'11-11	66.45	5.4	3.4	intron	CR42721 +	chr3R_22_6770001	chr3R_6770001	0.50	RAL-531
360	chr3R	6972185	6972281	roo	20	405	22	96	'7-15	68.85	5.4	3.4	intron	Antp -	chr3R_22_6970001	chr3R_6970001	0.32	RAL-531
361	chr3R	7128822	7128945	297	6580	394	24	123	'10-14	68.95	6.2	3.3	5` UTR	CR42875 +	chr3R_24_7125001	chr3R_7125001	0.42	RAL-531
362	chr3R	7427212	7427325	pogo	3	2094	6	113	'4-2	72.03	4.1	1.2	intergenic	not near genes	chr3R_6_7425001	chr3R_7425001	0.67	RAL-531
363	chr3R	7458094	7458208	roo	8666	404	24	114	'11-13	68.28	6.4	3.2	intergenic	not near genes	chr3R_24_7455001	chr3R_7455001	0.46	RAL-531
364	chr3R	7760552	7760664	copia	252	5	30	112	'18-12	65.96	6.8	3.8	intron	Sp7 +	chr3R_30_7760001	chr3R_7760001	0.60	RAL-531
365	chr3R	7891675	7891718	F-element	28	6	7	43	'3-4	65.38	7.5	0.8	intron,intron	mRpS9 -,wtrw +	chr3R_7_7890001	chr3R_7890001	0.43	RAL-531
366	chr3R	8354542	8354655	Quasimodo	7	7365	8	113	'4-4	69.25	3.5	1.8	intergenic	not near genes	chr3R_8_8350001	chr3R_8350001	0.50	RAL-531
367	chr3R	8510200	8510308	roo	410	14	20	108	'14-6	57.93	7.0	2.5	exon	Or85b -	chr3R_20_8510001	chr3R_8510001	0.70	RAL-531
368	chr3R	8630372	8630484	hobo	3	2936	18	112	'13-5	61.71	5.9	2.6	intergenic	5-HT2B +	chr3R_18_8630001	chr3R_8630001	0.72	RAL-531
369	chr3R	9024839	9024930	pogo	19	2097	10	91	'6-4	69.48	6.0	1.4	intron	neur -	chr3R_10_9020001	chr3R_9020001	0.60	RAL-531
370	chr3R	9057617	9057706	P-element	2885	5	12	89	'6-6	45.73	5.3	1.9	intron	Kdm2 +	chr3R_12_9055001	chr3R_9055001	0.50	RAL-531
371	chr3R	9139879	9139988	297	6585	6966	22	109	'5-17	69.76	5.0	3.7	intron	pum -	chr3R_22_9135001	chr3R_9135001	0.23	RAL-531
372	chr3R	9153136	9153257	roo	8664	409	23	121	'14-9	66.93	5.0	3.8	intron	pum -	chr3R_23_9150001	chr3R_9150001	0.61	RAL-531
373	chr3R	9347596	9347710	S-element	6	4	28	114	'14-14	68.22	6.5	3.7	intron	CG45050 +	chr3R_28_9345001	chr3R_9345001	0.50	RAL-531
374	chr3R	9834062	9834162	roo	412	4	17	100	'8-9	65.62	3.2	4.0	intron	Teh1 -	chr3R_17_9830001	chr3R_9830001	0.47	RAL-531
375	chr3R	10052944	10053040	hobo	8	2925	12	96	'5-7	62.71	4.6	2.1	3` UTR	CR44192 -	chr3R_12_10050001	chr3R_10050001	0.42	RAL-531
376	chr3R	10203694	10203740	jockey	15	4	13	46	'4-9	65.69	11.0	1.1	intron	Syn +	chr3R_13_10200001	chr3R_10200001	0.31	RAL-531
377	chr3R	10425722	10425823	mdg1	7041	404	24	101	'13-11	67.22	4.9	4.1	intergenic	not near genes	chr3R_24_10425001	chr3R_10425001	0.54	RAL-531
378	chr3R	10431779	10431900	roo	8664	408	21	121	'5-16	68.90	6.3	2.9	intergenic	not near genes	chr3R_21_10430001	chr3R_10430001	0.24	RAL-531
379	chr3R	10708226	10708340	Transpac	4919	310	31	114	'18-13	65.23	4.3	5.8	exon	CG31278 -	chr3R_31_10705001	chr3R_10705001	0.58	RAL-531
380	chr3R	10917997	10918087	412	1	7546	19	90	'11-8	66.15	6.1	2.7	intergenic	not near genes	chr3R_19_10915001	chr3R_10915001	0.58	RAL-531
381	chr3R	11267988	11268083	pogo	2095	12	20	95	'6-14	66.64	3.5	4.4	intergenic	not near genes	chr3R_20_11265001	chr3R_11265001	0.30	RAL-531
382	chr3R	11340738	11340828	jockey	4959	4672	9	90	'2-7	62.38	1.8	3.2	intron	pros +	chr3R_9_11340001	chr3R_11340001	0.22	RAL-531
383	chr3R	11449791	11449903	S-element	1	1714	17	112	'8-9	68.60	3.0	4.2	intron,intron	sals -,CG17230 +	chr3R_17_11445001	chr3R_11445001	0.47	RAL-531
384	chr3R	11461760	11461875	17.6	1	7414	36	115	'20-16	65.94	2.8	9.5	intron	CG17230 +	chr3R_36_11460001	chr3R_11460001	0.56	RAL-531
385	chr3R	11501739	11501849	mdg3	5253	236	22	110	'13-9	61.64	5.3	3.5	intron	dpr5 +	chr3R_22_11500001	chr3R_11500001	0.59	RAL-531
386	chr3R	11522555	11522653	mdg3	222	5251	19	98	'8-11	67.46	5.3	3.0	intergenic	not near genes	chr3R_19_11520001	chr3R_11520001	0.42	RAL-531
387	chr3R	11553654	11553716	hopper	1395	24	10	62	'8-2	64.69	7.6	1.2	intergenic	CG14708 +	chr3R_10_11550001	chr3R_11550001	0.80	RAL-531
388	chr3R	11689122	11689223	1360	4	12	17	101	'5-12	66.25	5.1	2.8	intron	CG6908 -	chr3R_17_11685001	chr3R_11685001	0.29	RAL-531
389	chr3R	11911208	11911325	S-element	1715	6	30	117	'24-6	67.33	8.1	3.3	intron	Cad87A -	chr3R_30_11910001	chr3R_11910001	0.80	RAL-531
390	chr3R	11997561	11997672	1360	2	6	23	111	'14-9	69.03	4.7	4.0	intron	Tk -	chr3R_23_11995001	chr3R_11995001	0.61	RAL-531
391	chr3R	12047402	12047478	Stalker2	7644	7262	14	76	'6-8	65.09	5.4	2.2	intergenic	not near genes	chr3R_14_12045001	chr3R_12045001	0.43	RAL-531
392	chr3R	12363232	12363271	Doc	7	42	13	39	'5-8	62.67	10.4	1.1	3` UTR	CG4115 +	chr3R_13_12360001	chr3R_12360001	0.38	RAL-531
393	chr3R	12597217	12597249	17.6	6941	46	13	32	'6-7	64.77	7.6	1.5	intergenic	not near genes	chr3R_13_12595001	chr3R_12595001	0.46	RAL-531
394	chr3R	12778402	12778521	springer	7523	7142	10	119	'8-2	67.74	4.3	1.9	5` UTR	beat-Vc -	chr3R_10_12775001	chr3R_12775001	0.80	RAL-531
395	chr3R	12837758	12837852	roo	9046	1	23	94	'6-17	66.89	5.5	3.5	intergenic	not near genes	chr3R_23_12835001	chr3R_12835001	0.26	RAL-531
396	chr3R	12953234	12953295	jockey	19	4990	10	61	'5-5	54.97	6.8	1.3	intron	grsm -	chr3R_10_12950001	chr3R_12950001	0.50	RAL-531
397	chr3R	13013616	13013737	S-element	2	1715	20	121	'11-9	70.33	6.1	2.8	intron	CtBP +	chr3R_20_13010001	chr3R_13010001	0.55	RAL-531
398	chr3R	13349490	13349595	Ivk	5370	1	31	105	'21-10	62.23	3.0	7.8	intergenic	not near genes	chr3R_31_13345001	chr3R_13345001	0.68	RAL-531
399	chr3R	13437166	13437254	hopper	31	2	12	88	'6-6	68.96	4.6	2.1	intergenic	not near genes	chr3R_12_13435001	chr3R_13435001	0.50	RAL-531
400	chr3R	13684395	13684450	P-element	2777	3	13	55	'5-8	40.12	5.8	1.9	intron,intron	omd -,flfl +	chr3R_13_13680001	chr3R_13680001	0.38	RAL-531
401	chr3R	13732298	13732390	hopper	21	1407	12	92	'7-5	67.07	4.8	2.1	intron	CG34383 +	chr3R_12_13730001	chr3R_13730001	0.58	RAL-531
402	chr3R	13824103	13824215	297	6581	6965	21	112	'13-8	68.95	3.7	4.5	intergenic	not near genes	chr3R_21_13820001	chr3R_13820001	0.62	RAL-531
403	chr3R	14085375	14085464	hobo	2920	1	8	89	'2-6	65.84	3.7	1.7	intron	foxo +	chr3R_8_14085001	chr3R_14085001	0.25	RAL-531
404	chr3R	14165846	14165896	roo	8664	8681	6	50	'5-1	66.69	8.3	0.6	3` UTR	Dop1R1 -	chr3R_6_14165001	chr3R_14165001	0.83	RAL-531
405	chr3R	14490366	14490469	copia	6	244	22	103	'17-5	64.81	5.9	3.2	intergenic	not near genes	chr3R_22_14490001	chr3R_14490001	0.77	RAL-531
406	chr3R	14688236	14688340	pogo	2094	3	21	104	'6-15	59.76	1.2	9.5	intron	Meltrin -	chr3R_21_14685001	chr3R_14685001	0.29	RAL-531
407	chr3R	15246605	15246717	flea	5007	4759	23	112	'13-10	68.13	6.6	3.0	3` UTR	Hsc70-4 +	chr3R_23_15245001	chr3R_15245001	0.57	RAL-531
408	chr3R	15692951	15693054	pogo	2	2082	19	103	'16-3	63.45	6.3	2.6	intergenic	CG31446 +	chr3R_19_15690001	chr3R_15690001	0.84	RAL-531
409	chr3R	15714329	15714414	jockey	15	4990	23	85	'9-14	60.65	3.3	5.3	intergenic	not near genes	chr3R_23_15710001	chr3R_15710001	0.39	RAL-531
410	chr3R	16194867	16194912	jockey	12	17	5	45	'3-2	58.56	7.8	0.6	intron	sra +	chr3R_5_16190001	chr3R_16190001	0.60	RAL-531
411	chr3R	16235622	16235710	P-element	2886	7	10	88	'1-9	55.70	3.8	2.1	intron	tara +	chr3R_10_16235001	chr3R_16235001	0.10	RAL-531
412	chr3R	16679085	16679133	Doc	30	8	15	48	'8-7	63.28	10.2	1.3	intron	Ubx -	chr3R_15_16675001	chr3R_16675001	0.53	RAL-531
413	chr3R	16799775	16799815	X-element	4626	4688	13	40	'2-11	53.70	13.3	0.9	intergenic	not near genes	chr3R_13_16795001	chr3R_16795001	0.15	RAL-531
414	chr3R	17506751	17506794	hobo	11	30	7	43	'1-6	72.03	4.9	1.2	intergenic	not near genes	chr3R_7_17505001	chr3R_17505001	0.14	RAL-531
415	chr3R	17649868	17649986	hobo	4	2709	9	118	'7-2	64.17	2.7	2.4	intron	CG14322 +	chr3R_9_17645001	chr3R_17645001	0.78	RAL-531
416	chr3R	17654280	17654320	P-element	2841	2877	7	40	'2-5	49.98	6.6	0.9	intron	CG14322 +	chr3R_7_17650001	chr3R_17650001	0.29	RAL-531
417	chr3R	17679660	17679768	P-element	2	2	14	108	'6-8	52.78	5.2	2.3	intron	alt -	chr3R_14_17675001	chr3R_17675001	0.43	RAL-531
418	chr3R	17939721	17939827	Juan	4213	4022	20	106	'7-13	63.23	3.8	4.2	intron	cpo +	chr3R_20_17935001	chr3R_17935001	0.35	RAL-531
419	chr3R	18004832	18004951	Transpac	308	1	24	119	'9-15	65.92	6.4	3.2	intron	cpo +	chr3R_24_18000001	chr3R_18000001	0.38	RAL-531
420	chr3R	18104971	18105116	TART-B	10507	10508	4	145	'1-3	46.31	3.2	1.0	intron	sr +	chr3R_4_18100001	chr3R_18100001	0.25	RAL-531
421	chr3R	18817497	18817622	flea	257	4755	24	125	'14-10	66.44	2.6	6.7	intron	CG18208 -	chr3R_24_18815001	chr3R_18815001	0.58	RAL-531
422	chr3R	18903232	18903275	jockey	4987	4944	12	43	'7-5	60.16	9.2	1.2	intergenic	CG34284 -	chr3R_12_18900001	chr3R_18900001	0.58	RAL-531
423	chr3R	19436006	19436091	springer	7154	7522	7	85	'2-5	67.22	3.3	1.6	intron	CG31221 +	chr3R_7_19435001	chr3R_19435001	0.29	RAL-531
424	chr3R	19625880	19625996	297	394	6585	14	116	'7-7	69.53	6.0	2.0	intron	CG6231 -	chr3R_14_19625001	chr3R_19625001	0.50	RAL-531
425	chr3R	19683872	19683990	pogo	5	2100	14	118	'12-2	67.35	3.1	3.4	intron	Naam +	chr3R_14_19680001	chr3R_19680001	0.86	RAL-531
426	chr3R	19844819	19844900	Max-element	3	286	9	81	'6-3	66.27	3.5	2.0	intergenic	not near genes	chr3R_9_19840001	chr3R_19840001	0.67	RAL-531
427	chr3R	19849862	19849973	roo	8668	407	16	111	'10-6	68.15	1.8	5.7	intron	CG4662 +	chr3R_16_19845001	chr3R_19845001	0.62	RAL-531
428	chr3R	19940894	19941010	Tirant	404	3	13	116	'9-4	64.49	6.6	1.7	intron	Hs6st -	chr3R_13_19940001	chr3R_19940001	0.69	RAL-531
429	chr3R	20095416	20095494	412	13	463	16	78	'12-4	60.65	4.7	2.8	intergenic	not near genes	chr3R_16_20095001	chr3R_20095001	0.75	RAL-531
430	chr3R	20351181	20351296	copia	252	4871	19	115	'4-15	67.93	5.5	2.9	intergenic	not near genes	chr3R_19_20350001	chr3R_20350001	0.21	RAL-531
431	chr3R	20413897	20413950	hopper	1367	17	4	53	'2-2	61.28	1.8	1.4	intron	Gfrl -	chr3R_4_20410001	chr3R_20410001	0.50	RAL-531
432	chr3R	20457034	20457100	springer	7147	383	7	66	'3-4	64.18	3.8	1.5	intron	Gfrl -	chr3R_7_20455001	chr3R_20455001	0.43	RAL-531
433	chr3R	20457622	20457704	3S18	5766	304	15	82	'11-4	65.91	7.2	1.8	intron	Gfrl -	chr3R_15_20455001	chr3R_20455001	0.73	RAL-531
434	chr3R	21180335	21180441	Ivk	7	5376	19	106	'9-10	67.93	6.8	2.4	intron	SNF4Agamma +	chr3R_19_21180001	chr3R_21180001	0.47	RAL-531
435	chr3R	21296467	21296558	P-element	2886	2867	16	91	'7-9	49.50	7.7	1.8	intergenic	Hsromega +	chr3R_16_21295001	chr3R_21295001	0.44	RAL-531
436	chr3R	21313261	21313375	pogo	2096	2	22	114	'8-14	67.62	6.0	3.1	5` UTR	Hsromega +	chr3R_22_21310001	chr3R_21310001	0.36	RAL-531
437	chr3R	21589034	21589136	opus	7022	497	20	102	'8-12	67.94	7.0	2.5	intron	InR -	chr3R_20_21585001	chr3R_21585001	0.40	RAL-531
438	chr3R	21701157	21701189	roo	8698	8666	8	32	'7-1	59.42	4.1	1.6	intron	CG31176 -	chr3R_8_21700001	chr3R_21700001	0.88	RAL-531
439	chr3R	21716272	21716389	roo	8665	406	25	117	'15-10	66.16	6.2	3.5	intron	CG31176 -	chr3R_25_21715001	chr3R_21715001	0.60	RAL-531
440	chr3R	21816258	21816283	hobo	32	15	6	25	'3-3	58.60	3.6	1.3	intron	CASK -	chr3R_6_21815001	chr3R_21815001	0.50	RAL-531
441	chr3R	21847529	21847610	Tirant	3	388	6	81	'5-1	62.09	3.7	1.3	intergenic	not near genes	chr3R_6_21845001	chr3R_21845001	0.83	RAL-531
442	chr3R	22553595	22553718	roo	8663	410	24	123	'13-11	70.17	4.9	4.1	intron	bond +	chr3R_24_22550001	chr3R_22550001	0.54	RAL-531
443	chr3R	23007378	23007475	hobo	5	2923	8	97	'6-2	61.01	4.8	1.4	intron	CG34375 -	chr3R_8_23005001	chr3R_23005001	0.75	RAL-531
444	chr3R	23240671	23240778	jockey	4983	4758	27	107	'14-13	67.05	6.0	3.9	intron	CG4467 -	chr3R_27_23240001	chr3R_23240001	0.52	RAL-531
445	chr3R	23527862	23527954	412	7532	7068	15	92	'2-13	61.21	6.8	1.9	intron	CG10175 -	chr3R_15_23525001	chr3R_23525001	0.13	RAL-531
446	chr3R	24031445	24031471	P-element	2850	6	5	26	'1-4	54.30	8.1	0.5	5` UTR	KrT95D -	chr3R_5_24030001	chr3R_24030001	0.20	RAL-531
447	chr3R	24536409	24536525	opus	499	7	16	116	'6-10	64.88	5.6	2.4	3` UTR	CG5789 -	chr3R_16_24535001	chr3R_24535001	0.38	RAL-531
448	chr3R	25365270	25365343	roo	9030	8667	12	73	'8-4	65.86	2.2	3.8	intron	Fur1 -	chr3R_12_25365001	chr3R_25365001	0.67	RAL-531
449	chr3R	25556699	25556817	Transpac	309	3	27	118	'14-13	65.45	7.0	3.4	intron	msi +	chr3R_27_25555001	chr3R_25555001	0.52	RAL-531
450	chr3R	26142901	26143013	roo	6	408	30	112	'18-12	65.77	6.1	4.2	intergenic	not near genes	chr3R_30_26140001	chr3R_26140001	0.60	RAL-531
451	chr3R	27072233	27072329	I-element	5349	11	26	96	'14-12	64.52	7.3	3.1	intergenic	not near genes	chr3R_26_27070001	chr3R_27070001	0.54	RAL-531
452	chr3R	27080191	27080268	opus	7461	113	5	77	'1-4	64.18	2.3	1.5	intron	CG14257 +	chr3R_5_27080001	chr3R_27080001	0.20	RAL-531
453	chr3R	27374399	27374441	jockey	15	59	6	42	'3-3	61.30	7.0	0.8	intergenic	not near genes	chr3R_6_27370001	chr3R_27370001	0.50	RAL-531
454	chr3R	27460964	27461065	mdg1	6	418	22	101	'11-11	64.16	5.1	3.6	intergenic	not near genes	chr3R_22_27460001	chr3R_27460001	0.50	RAL-531
455	chr3R	27763366	27763449	opus	7499	7030	14	83	'8-6	68.05	7.0	1.8	intergenic	not near genes	chr3R_14_27760001	chr3R_27760001	0.57	RAL-531
456	chr3R	27802630	27802659	jockey	32	9	6	29	'4-2	63.34	3.7	1.3	intron	CG34353 -	chr3R_6_27800001	chr3R_27800001	0.67	RAL-531
457	chr3R	28298343	28298446	roo	409	1	25	103	'7-18	67.61	4.7	4.4	intergenic	not near genes	chr3R_25_28295001	chr3R_28295001	0.28	RAL-531
458	chr3R	28361034	28361150	roo	4	408	15	116	'5-10	61.49	2.2	4.7	intergenic	not near genes	chr3R_15_28360001	chr3R_28360001	0.33	RAL-531
459	chr3R	28388747	28388867	blood	1	379	16	120	'4-12	63.73	3.6	3.5	intergenic	not near genes	chr3R_16_28385001	chr3R_28385001	0.25	RAL-531
460	chr3R	29212881	29212954	1360	3380	3383	10	73	'5-5	68.10	4.9	1.7	intergenic	not near genes	chr3R_10_29210001	chr3R_29210001	0.50	RAL-531
461	chr3R	29255903	29255942	P-element	24	2883	4	39	'3-1	51.34	2.1	1.3	intergenic	stg -	chr3R_4_29255001	chr3R_29255001	0.75	RAL-531
462	chr3R	29361642	29361746	412	493	16	27	104	'17-10	63.72	3.0	6.8	intergenic	not near genes	chr3R_27_29360001	chr3R_29360001	0.63	RAL-531
463	chr3R	29437982	29438069	roo	9053	11	25	87	'10-15	64.57	3.1	6.1	intron	Ptp99A +	chr3R_25_29435001	chr3R_29435001	0.40	RAL-531
464	chr3R	30095077	30095193	roo	408	8668	21	116	'13-8	68.91	6.0	3.0	intron	sima +	chr3R_21_30095001	chr3R_30095001	0.62	RAL-531
465	chr3R	30771888	30771950	pogo	12	2078	7	62	'4-3	68.49	4.5	1.3	intron	zfh1 +	chr3R_7_30770001	chr3R_30770001	0.57	RAL-531
466	chr3R	31105339	31105368	mdg1	385	7438	6	29	'2-4	64.06	6.9	0.8	intergenic	not near genes	chr3R_6_31105001	chr3R_31105001	0.33	RAL-531
467	chr3R	31438237	31438262	jockey	20	14	7	25	'4-3	55.87	2.0	2.3	intron	Gprk2 +	chr3R_7_31435001	chr3R_31435001	0.57	RAL-531
468	chr3R	31713294	31713345	P-element	10	2	8	51	'4-4	54.15	2.1	2.6	intergenic	not near genes	chr3R_8_31710001	chr3R_31710001	0.50	RAL-531
469	chr3R	31735368	31735490	diver	228	5890	31	122	'22-9	66.67	6.9	3.9	3` UTR	ttk +	chr3R_31_31735001	chr3R_31735001	0.71	RAL-531
470	chr3R	31737955	31738071	P-element	1	2886	11	116	'10-1	53.81	5.5	1.7	3` UTR	CG11563 +	chr3R_11_31735001	chr3R_31735001	0.91	RAL-531
471	chr3R	31846042	31846158	297	394	6	18	116	'12-6	69.75	5.6	2.7	3` UTR	RhoGAP100F +	chr3R_18_31845001	chr3R_31845001	0.67	RAL-531
472	chr3R	31919796	31919850	I-element	8	5346	14	54	'7-7	68.95	6.9	1.8	intron	heph -	chr3R_14_31915001	chr3R_31915001	0.50	RAL-531
473	chr3R	32069203	32069303	Juan	3	4206	24	100	'11-13	63.65	7.7	2.8	intergenic	not near genes	chr3R_24_32065001	chr3R_32065001	0.46	RAL-531
474	chr4	311185	311234	1360	1	3338	15	49	'8-7	68.37	7.1	1.9	3` UTR	Zip102B -	chr4_15_310001	chr4_310001	0.53	RAL-531
475	chr4	311570	311603	1360	36	3381	15	33	'9-6	61.62	6.8	1.9	3` UTR	Zip102B -	chr4_15_310001	chr4_310001	0.60	RAL-531
476	chr4	565840	565945	pogo	4	2086	24	105	'15-9	69.28	7.9	2.7	3` UTR	Pur-alpha +	chr4_24_565001	chr4_565001	0.62	RAL-531
477	chrX	314533	314656	297	394	6580	25	123	'16-9	68.50	4.8	4.3	intron	CG3777 +	chrX_25_310001	chrX_310001	0.64	RAL-531
478	chrX	341363	341483	S-element	1	1713	15	120	'4-11	70.35	5.3	2.4	intron,intron	CG3777 +,CG32816 -	chrX_15_340001	chrX_340001	0.27	RAL-531
479	chrX	963982	964059	roo	411	8710	9	77	'7-2	66.77	2.7	2.4	intergenic	not near genes	chrX_9_960001	chrX_960001	0.78	RAL-531
480	chrX	992936	993036	roo	8670	395	15	100	'9-6	67.20	2.5	4.3	intergenic	not near genes	chrX_15_990001	chrX_990001	0.60	RAL-531
481	chrX	1018111	1018157	1360	233	190	7	46	'2-5	71.23	4.1	1.4	intron,intron	su(w[a]) +,CG11638 -	chrX_7_1015001	chrX_1015001	0.29	RAL-531
482	chrX	1176776	1176869	roo	11	403	15	93	'9-6	65.92	3.1	3.7	intergenic	not near genes	chrX_15_1175001	chrX_1175001	0.60	RAL-531
483	chrX	1597599	1597694	FB	1	9	14	95	'8-6	66.10	3.4	3.2	intron,intron	Mur2B -,br +	chrX_14_1595001	chrX_1595001	0.57	RAL-531
484	chrX	1599383	1599472	hopper	1389	1411	6	89	'2-4	63.94	1.5	2.4	intron,intron	Mur2B -,br +	chrX_6_1595001	chrX_1595001	0.33	RAL-531
485	chrX	1966810	1966924	roo	403	1	8	114	'6-2	75.36	1.1	3.8	intron	Hr4 +	chrX_8_1965001	chrX_1965001	0.75	RAL-531
486	chrX	2296496	2296572	P-element	10	1	12	76	'3-9	53.90	4.2	2.3	intron	phl +	chrX_12_2295001	chrX_2295001	0.25	RAL-531
487	chrX	2814020	2814127	roo	8671	9066	24	107	'13-11	66.15	2.8	6.3	intron	kirre +	chrX_24_2810001	chrX_2810001	0.54	RAL-531
488	chrX	2973995	2974068	I-element	3	5314	15	73	'10-5	62.68	3.0	3.8	intron	kirre +	chrX_15_2970001	chrX_2970001	0.67	RAL-531
489	chrX	3003658	3003732	Juan	4189	12	15	74	'11-4	63.63	1.6	5.8	intron	kirre +	chrX_15_3000001	chrX_3000001	0.73	RAL-531
490	chrX	3066526	3066597	Max-element	8255	8512	5	71	'3-2	55.71	3.0	1.2	intron	kirre +	chrX_5_3065001	chrX_3065001	0.60	RAL-531
491	chrX	3922544	3922576	I-element	5313	5345	8	32	'7-1	66.97	6.9	1.0	intron	CG42541 -	chrX_8_3920001	chrX_3920001	0.88	RAL-531
492	chrX	4185905	4185999	1360	3382	3387	12	94	'6-6	68.67	3.2	2.9	intron	Fas2 -	chrX_12_4185001	chrX_4185001	0.50	RAL-531
493	chrX	4226392	4226516	HMS-Beagle	2	246	8	124	'4-4	64.94	1.3	3.5	intergenic	not near genes	chrX_8_4225001	chrX_4225001	0.50	RAL-531
494	chrX	4345725	4345843	mdg3	248	5254	9	118	'4-5	61.65	2.4	2.6	intron	norpA +	chrX_9_4345001	chrX_4345001	0.44	RAL-531
495	chrX	4387779	4387824	F-element	15	11	6	45	'3-3	65.81	5.0	1.0	3` UTR	CR32773 -	chrX_6_4385001	chrX_4385001	0.50	RAL-531
496	chrX	4418153	4418213	roo	9041	9	7	60	'1-6	61.83	1.4	2.9	intron,intron	CR32773 -,bi +	chrX_7_4415001	chrX_4415001	0.14	RAL-531
497	chrX	5197972	5198075	mdg1	7454	10	12	103	'6-6	67.68	3.3	2.8	intron,intron	CG15465 +,rg +	chrX_12_5195001	chrX_5195001	0.50	RAL-531
498	chrX	5479181	5479276	roo	394	12	11	95	'8-3	62.86	4.3	2.1	intron	SPR +	chrX_11_5475001	chrX_5475001	0.73	RAL-531
499	chrX	5504247	5504280	hobo	39	17	6	33	'4-2	68.64	0.7	3.5	intergenic	not near genes	chrX_6_5500001	chrX_5500001	0.67	RAL-531
500	chrX	5851667	5851766	Tirant	8105	394	5	99	'1-4	73.17	3.4	1.1	intergenic	not near genes	chrX_5_5850001	chrX_5850001	0.20	RAL-531
501	chrX	6192591	6192682	P-element	2885	10	13	91	'7-6	52.45	1.8	4.6	intergenic	Ca-alpha1T -	chrX_13_6190001	chrX_6190001	0.54	RAL-531
502	chrX	6425083	6425118	F-element	25	17	8	35	'4-4	61.49	4.9	1.4	intron	CG42340 -	chrX_8_6425001	chrX_6425001	0.50	RAL-531
503	chrX	7055867	7055931	hobo	23	2923	9	64	'6-3	59.91	3.3	2.1	intron	CG12541 -	chrX_9_7055001	chrX_7055001	0.67	RAL-531
504	chrX	7276504	7276608	412	5	7537	14	104	'8-6	62.01	3.3	3.3	intron	CR44357 -	chrX_14_7275001	chrX_7275001	0.57	RAL-531
505	chrX	7280294	7280382	jockey	4986	249	17	88	'6-11	64.19	6.7	2.2	intron	CR44357 -	chrX_17_7280001	chrX_7280001	0.35	RAL-531
506	chrX	7591203	7591228	I-element	5334	5349	9	25	'3-6	62.43	5.5	1.4	intergenic	not near genes	chrX_9_7590001	chrX_7590001	0.33	RAL-531
507	chrX	7811170	7811278	roo	10	406	18	108	'7-11	61.78	3.9	3.7	intergenic	not near genes	chrX_18_7810001	chrX_7810001	0.39	RAL-531
508	chrX	8192668	8192702	S-element	37	1713	6	34	'2-4	66.69	7.3	0.7	intron	sdt +	chrX_6_8190001	chrX_8190001	0.33	RAL-531
509	chrX	8346463	8346509	412	6	7104	9	46	'5-4	70.16	5.5	1.4	intron	nAChRalpha3 -	chrX_9_8345001	chrX_8345001	0.56	RAL-531
510	chrX	8772390	8772432	Tirant	358	8503	14	42	'10-4	62.41	4.1	2.7	intron	Lim1 -	chrX_14_8770001	chrX_8770001	0.71	RAL-531
511	chrX	9769938	9769988	roo	1	9030	8	50	'6-2	69.78	3.4	1.8	intergenic	not near genes	chrX_8_9765001	chrX_9765001	0.75	RAL-531
512	chrX	9874128	9874218	jockey	14	4982	15	90	'5-10	51.04	2.5	4.3	intergenic	CG32695 -,CG15247 -	chrX_15_9870001	chrX_9870001	0.33	RAL-531
513	chrX	10085081	10085178	412	3	7538	10	97	'8-2	63.88	0.9	5.3	3` UTR	CG2974 -	chrX_10_10085001	chrX_10085001	0.80	RAL-531
514	chrX	10112899	10113004	FB	1	16	14	105	'7-7	56.96	3.0	3.5	intron	RhoU +	chrX_14_10110001	chrX_10110001	0.50	RAL-531
515	chrX	10153108	10153220	roo	8665	401	26	112	'11-15	64.15	5.3	4.1	intron	CR44894 -	chrX_26_10150001	chrX_10150001	0.42	RAL-531
516	chrX	10550789	10550882	roo	398	17	11	93	'8-3	67.56	1.5	4.4	intron	spri -	chrX_11_10550001	chrX_10550001	0.73	RAL-531
517	chrX	10644720	10644751	hobo	1	26	5	31	'2-3	66.71	1.4	2.1	intron	X11Lbeta +	chrX_5_10640001	chrX_10640001	0.40	RAL-531
518	chrX	10683616	10683723	roo	6	401	16	107	'6-10	68.99	3.9	3.3	intron	X11Lbeta +	chrX_16_10680001	chrX_10680001	0.38	RAL-531
519	chrX	10749315	10749340	pogo	3	31	5	25	'3-2	68.08	17.4	0.3	3` UTR	Rph -	chrX_5_10745001	chrX_10745001	0.60	RAL-531
520	chrX	11006328	11006429	Burdock	2	6377	21	101	'8-13	65.57	4.9	3.6	intron	CG42339 -	chrX_21_11005001	chrX_11005001	0.38	RAL-531
521	chrX	11782862	11782908	roo	8672	357	8	46	'6-2	61.53	4.1	1.6	intergenic	not near genes	chrX_8_11780001	chrX_11780001	0.75	RAL-531
522	chrX	11918595	11918687	P-element	2884	21	13	92	'11-2	54.45	4.8	2.2	3` UTR	CR32661 -	chrX_13_11915001	chrX_11915001	0.85	RAL-531
523	chrX	12041520	12041615	297	6605	6972	22	95	'5-17	67.54	4.8	3.8	intergenic	not near genes	chrX_22_12040001	chrX_12040001	0.23	RAL-531
524	chrX	12133229	12133313	17.6	7407	10	8	84	'2-6	63.23	2.8	2.1	intron	Ten-a +	chrX_8_12130001	chrX_12130001	0.25	RAL-531
525	chrX	12434441	12434563	roo	1	410	20	122	'8-12	67.28	5.2	3.2	intron	Pkcdelta +	chrX_20_12430001	chrX_12430001	0.40	RAL-531
526	chrX	12867906	12867967	Quasimodo	35	7342	5	61	'1-4	73.53	0.9	2.6	intron	Pde9 -	chrX_5_12865001	chrX_12865001	0.20	RAL-531
527	chrX	13471847	13471943	3S18	6083	2	12	96	'3-9	62.71	3.5	2.7	intron	Neto +	chrX_12_13470001	chrX_13470001	0.25	RAL-531
528	chrX	13506887	13507002	roo	4	407	21	115	'9-12	70.59	6.5	2.8	intron	Neto +	chrX_21_13505001	chrX_13505001	0.43	RAL-531
529	chrX	13631753	13631852	mdg3	5491	5261	15	99	'2-13	60.23	4.7	2.6	intron	NFAT +	chrX_15_13630001	chrX_13630001	0.13	RAL-531
530	chrX	14343388	14343479	copia	247	4871	17	91	'5-12	67.25	2.8	4.5	intron	dpr8 +	chrX_17_14340001	chrX_14340001	0.29	RAL-531
531	chrX	14395628	14395734	297	4	6963	9	106	'7-2	68.33	2.2	2.8	intron	dpr8 +	chrX_9_14395001	chrX_14395001	0.78	RAL-531
532	chrX	14443921	14443978	hobo	2710	18	5	57	'1-4	61.98	2.9	1.3	intron	dpr8 +	chrX_5_14440001	chrX_14440001	0.20	RAL-531
533	chrX	15012478	15012565	mdg3	236	5259	6	87	'5-1	53.50	1.2	2.7	exon	hiw -	chrX_6_15010001	chrX_15010001	0.83	RAL-531
534	chrX	15261413	15261519	Stalker4	400	6	11	106	'6-5	63.15	5.4	1.7	intergenic	not near genes	chrX_11_15260001	chrX_15260001	0.55	RAL-531
535	chrX	15261451	15261520	Stalker	7211	6854	10	69	'5-5	71.45	5.2	1.6	intergenic	not near genes	chrX_10_15260001	chrX_15260001	0.50	RAL-531
536	chrX	15262195	15262307	blood	377	7020	4	112	'2-2	69.74	3.7	0.9	intergenic	not near genes	chrX_4_15260001	chrX_15260001	0.50	RAL-531
537	chrX	15434989	15435096	roo	14	409	24	107	'7-17	67.45	3.5	5.3	intron	Cngl -	chrX_24_15430001	chrX_15430001	0.29	RAL-531
538	chrX	15746272	15746315	jockey2	3201	3235	8	43	'4-4	65.50	2.0	2.7	intergenic	CG8944 -,Tcp-1zeta +	chrX_8_15745001	chrX_15745001	0.50	RAL-531
539	chrX	17001537	17001651	roo	5	409	18	114	'3-15	68.36	4.3	3.4	intron	CG45002 -	chrX_18_17000001	chrX_17000001	0.17	RAL-531
540	chrX	17017562	17017694	TART-A	13109	13111	6	132	'1-5	70.58	4.5	1.1	intron	CG45002 -	chrX_6_17015001	chrX_17015001	0.17	RAL-531
541	chrX	17047214	17047318	roo	8666	398	11	104	'6-5	62.42	3.4	2.5	intron	CG45002 -	chrX_11_17045001	chrX_17045001	0.55	RAL-531
542	chrX	17710105	17710169	P-element	2870	2	8	64	'5-3	48.54	4.6	1.4	intergenic	CG42684 +,CG8173 -	chrX_8_17710001	chrX_17710001	0.62	RAL-531
543	chrX	17837950	17838053	S-element	7	1715	15	103	'11-4	68.51	3.6	3.3	intron	CG6398 +	chrX_15_17835001	chrX_17835001	0.73	RAL-531
544	chrX	18319951	18319987	jockey	6	20	9	36	'5-4	63.79	4.2	1.7	intron	CG6023 -	chrX_9_18315001	chrX_18315001	0.56	RAL-531
545	chrX	18446544	18446629	297	27	6965	13	85	'6-7	64.80	2.5	3.7	intron	CG32547 -	chrX_13_18445001	chrX_18445001	0.46	RAL-531
546	chrX	18710884	18710939	roo	25	9043	5	55	'2-3	66.55	1.5	2.0	intron,exon	CCKLR-17D1 -,Cyp308a1 +	chrX_5_18710001	chrX_18710001	0.40	RAL-531
547	chrX	18788066	18788178	P-element	1	2884	21	112	'6-15	53.53	2.3	6.4	5` UTR	CG6961 -	chrX_21_18785001	chrX_18785001	0.29	RAL-531
548	chrX	18973437	18973520	1360	15	3380	7	83	'2-5	58.25	1.1	3.3	intron	CG43759 +	chrX_7_18970001	chrX_18970001	0.29	RAL-531
549	chrX	19129721	19129814	roo	406	8689	12	93	'6-6	62.82	0.8	6.7	intergenic	not near genes	chrX_12_19125001	chrX_19125001	0.50	RAL-531
550	chrX	19249676	19249714	jockey	4698	4676	4	38	'2-2	63.82	6.2	0.6	intron	Hs3st-B +	chrX_4_19245001	chrX_19245001	0.50	RAL-531
551	chrX	19316738	19316807	FB	1	32	16	69	'9-7	66.26	5.6	2.4	intron	out -	chrX_16_19315001	chrX_19315001	0.56	RAL-531
552	chrX	19402382	19402482	412	495	23	14	100	'10-4	64.15	2.8	3.7	intron	kek5 +	chrX_14_19400001	chrX_19400001	0.71	RAL-531
553	chrX	19421323	19421448	opus	498	7113	12	125	'6-6	68.38	4.0	2.4	intron	kek5 +	chrX_12_19420001	chrX_19420001	0.50	RAL-531
554	chrX	19426204	19426303	mdg3	5251	5485	18	99	'10-8	64.06	7.0	2.2	intron	kek5 +	chrX_18_19425001	chrX_19425001	0.56	RAL-531
555	chrX	19509507	19509627	S-element	1	2	24	120	'17-7	65.70	5.7	3.6	intron	CG14200 +	chrX_24_19505001	chrX_19505001	0.71	RAL-531
556	chrX	19586525	19586624	mdg3	5254	247	21	99	'9-12	63.74	3.6	4.6	exon	CG14204 +	chrX_21_19585001	chrX_19585001	0.43	RAL-531
557	chrX	19697590	19697641	hopper	39	1388	5	51	'3-2	65.46	1.3	2.2	intron	Cdc42 +	chrX_5_19695001	chrX_19695001	0.60	RAL-531
558	chrX	20103158	20103267	roo	399	8666	13	109	'6-7	64.68	4.2	2.5	intergenic	not near genes	chrX_13_20100001	chrX_20100001	0.46	RAL-531
559	chrX	20339574	20339674	Transpac	293	4919	19	100	'7-12	63.11	4.6	3.4	intergenic	not near genes	chrX_19_20335001	chrX_20335001	0.37	RAL-531
560	chrX	20381382	20381407	INE-1	581	561	9	25	'4-5	74.89	4.8	1.6	intergenic	not near genes	chrX_9_20380001	chrX_20380001	0.44	RAL-531
561	chrX	20711045	20711157	Burdock	6383	6138	21	112	'11-10	63.20	3.4	4.8	intergenic	not near genes	chrX_21_20710001	chrX_20710001	0.52	RAL-531
562	chrX	20863270	20863371	roo	402	12	13	101	'6-7	66.69	1.7	4.8	intron	shakB -	chrX_13_20860001	chrX_20860001	0.46	RAL-531
563	chrX	20867617	20867648	jockey	4679	4678	5	31	'3-2	57.61	0.4	3.6	intron	shakB -	chrX_5_20865001	chrX_20865001	0.60	RAL-531
564	chrX	20952908	20952959	jockey	4990	4939	14	51	'7-7	64.81	5.1	2.3	intergenic	not near genes	chrX_14_20950001	chrX_20950001	0.50	RAL-531
565	chrX	21083456	21083563	Stalker2	7644	4	26	107	'8-18	64.19	3.9	5.3	intergenic	not near genes	chrX_26_21080001	chrX_21080001	0.31	RAL-531
566	chrX	21087570	21087679	mdg3	5256	5497	7	109	'5-2	60.85	1.2	3.2	intergenic	not near genes	chrX_7_21085001	chrX_21085001	0.71	RAL-531
567	chrX	21399383	21399459	pogo	6	2091	22	76	'11-11	65.34	4.2	4.2	intergenic	not near genes	chrX_22_21395001	chrX_21395001	0.50	RAL-531
568	chrX	21575409	21575522	roo	403	2	22	113	'10-12	68.73	6.7	2.9	intergenic	not near genes	chrX_22_21575001	chrX_21575001	0.45	RAL-531
569	chrX	21637867	21637901	412	7092	16	8	34	'5-3	63.86	3.0	2.0	intergenic	not near genes	chrX_8_21635001	chrX_21635001	0.62	RAL-531
570	chrX	22743472	22743578	297	394	6580	11	106	'9-2	65.68	1.8	3.9	intron	CR44997 +	chrX_11_22740001	chrX_22740001	0.82	RAL-531
571	chrX	22754063	22754129	hopper	1411	1398	5	66	'3-2	51.86	4.5	0.9	intron	CR44997 +	chrX_5_22750001	chrX_22750001	0.60	RAL-531
572	chrX	22824789	22824824	jockey	4776	4757	8	35	'5-3	58.88	4.9	1.4	3` UTR	fog -	chrX_8_22820001	chrX_22820001	0.62	RAL-531
573	chrX	22916234	22916346	Transpac	4930	311	17	112	'13-4	65.61	5.5	2.6	intergenic	not near genes	chrX_17_22915001	chrX_22915001	0.76	RAL-531