SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 25380 25419 chr2L 25704 25743 4 324 43.0 24.0 33.5 0.1 363 chr2L 25380 intergenic Cda5 -,Ir21a - chr2L 25562 3` UTR Cda5 - chr2L 25743 3` UTR Cda5 - chr2L_4_25001 chr2L_25001 RAL-531 2 chr2L 46332 46382 chr2L 46430 46478 21 97 5.5 3.0 4.2 4.0 146 chr2L 46332 intron Cda5 - chr2L 46405 intron Cda5 - chr2L 46478 intron Cda5 - chr2L_21_45001 chr2L_45001 RAL-531 3 chr2L 47444 47488 chr2L 52568 52613 jockey 13 5122 2.0 6.5 4.2 2.5 5169 chr2L 47444 intron Cda5 - chr2L 50028 intron Cda5 - chr2L 52613 intron Cda5 - chr2L_13_50001 chr2L_50001 RAL-531 4 chr2L 89727 89748 chr2L 89790 89835 5 82 2.0 2.5 2.2 1.6 108 chr2L 89727 intergenic not near genes chr2L 89781 intergenic not near genes chr2L 89835 intergenic not near genes chr2L_5_85001 chr2L_85001 RAL-531 5 chr2L 172055 172087 chr2L 172146 172183 7 99 6.0 6.5 6.2 1.0 128 chr2L 172055 intron spen + chr2L 172119 intron spen + chr2L 172183 intron spen + chr2L_7_170001 chr2L_170001 RAL-531 6 chr2L 263287 263329 chr2L 263447 263495 11 164 0.5 5.5 3.0 2.8 208 chr2L 263287 intron,3` UTR CG3645 -,CG17075 - chr2L 263391 intron,3` UTR CG3645 -,CG17075 - chr2L 263495 intron,3` UTR CG3645 -,CG17075 - chr2L_11_260001 chr2L_260001 RAL-531 7 chr2L 297670 297716 chr2L 297790 297821 6 114 3.0 2.5 2.8 1.6 151 chr2L 297670 intergenic Pi3K21B +,Hop + chr2L 297746 intergenic Pi3K21B +,Hop + chr2L 297821 intergenic Pi3K21B +,Hop + chr2L_6_295001 chr2L_295001 RAL-531 8 chr2L 314131 314140 chr2L 314217 314222 4 90 3.0 2.5 2.8 1.1 91 chr2L 314131 intron Plc21C + chr2L 314176 intron Plc21C + chr2L 314222 intron Plc21C + chr2L_4_310001 chr2L_310001 RAL-531 9 chr2L 323434 323484 chr2L 323532 323572 15 96 4.0 2.0 3.0 3.8 138 chr2L 323434 intron Plc21C + chr2L 323503 intron Plc21C + chr2L 323572 intron Plc21C + chr2L_15_320001 chr2L_320001 RAL-531 10 chr2L 347875 347918 chr2L 355387 355432 blood 9 7515 3.5 4.0 3.8 1.9 7557 chr2L 347875 3` UTR Plc21C + chr2L 351654 intron Plc21C + chr2L 355432 3` UTR Plc21C + chr2L_9_350001 chr2L_350001 RAL-531 11 chr2L 371424 371447 chr2L 371523 371546 5 99 4.0 5.5 4.8 0.9 122 chr2L 371424 intergenic not near genes chr2L 371485 intergenic not near genes chr2L 371546 intergenic not near genes chr2L_5_370001 chr2L_370001 RAL-531 12 chr2L 407936 407972 chr2L 408031 408072 12 100 4.5 3.5 4.0 2.4 136 chr2L 407936 3` UTR RpI135 + chr2L 408004 intergenic AP-2alpha -,RpI135 + chr2L 408072 3` UTR AP-2alpha - chr2L_12_405001 chr2L_405001 RAL-531 13 chr2L 628481 628517 chr2L 628619 628624 7 126 3.5 1.5 2.5 2.0 143 chr2L 628481 intergenic CR45369 +,CG2839 + chr2L 628552 intergenic CR45369 +,CG2839 + chr2L 628624 intergenic CR45369 +,CG2839 + chr2L_7_625001 chr2L_625001 RAL-531 14 chr2L 630300 630332 chr2L 630412 630444 6 112 0.0 3.0 1.5 2.4 144 chr2L 630300 intergenic not near genes chr2L 630372 intergenic not near genes chr2L 630444 intergenic not near genes chr2L_6_630001 chr2L_630001 RAL-531 15 chr2L 632685 632735 chr2L 632785 632795 7 84 1.0 0.0 0.5 4.7 110 chr2L 632685 intergenic not near genes chr2L 632740 intergenic not near genes chr2L 632795 intergenic not near genes chr2L_7_630001 chr2L_630001 RAL-531 16 chr2L 686916 686949 chr2L 695956 695989 roo 6 9048 0.0 5.5 2.8 1.6 9073 chr2L 686916 intron ds - chr2L 691452 intron ds - chr2L 695989 intron ds - chr2L_6_690001 chr2L_690001 RAL-531 17 chr2L 741252 741277 chr2L 744770 744817 9 3521 8.0 19.5 13.8 0.6 3565 chr2L 741252 intron Eaat2 - chr2L 743034 intron Eaat2 - chr2L 744817 intergenic Eaat2 - chr2L_9_740001 chr2L_740001 RAL-531 18 chr2L 791434 791466 chr2L 791548 791580 13 114 4.0 5.0 4.5 2.4 146 chr2L 791434 intergenic not near genes chr2L 791507 intergenic not near genes chr2L 791580 intergenic not near genes chr2L_13_790001 chr2L_790001 RAL-531 19 chr2L 849455 849486 chr2L 849565 849573 12 106 3.0 5.5 4.2 2.3 118 chr2L 849455 intron drongo - chr2L 849514 intron drongo - chr2L 849573 intron drongo - chr2L_12_845001 chr2L_845001 RAL-531 20 chr2L 922445 922494 chr2L 922546 922578 18 99 1.5 3.5 2.5 5.1 133 chr2L 922445 intergenic CG4341 + chr2L 922512 intergenic CG4341 + chr2L 922578 intergenic CG4341 + chr2L_18_920001 chr2L_920001 RAL-531 21 chr2L 924589 924619 chr2L 924871 924910 4 289 4.0 2.0 3.0 1.0 321 chr2L 924589 intron CG4341 + chr2L 924750 intron CG4341 + chr2L 924910 intron CG4341 + chr2L_4_920001 chr2L_920001 RAL-531 22 chr2L 927858 927865 chr2L 928008 928037 4 157 3.5 3.0 3.2 1.0 179 chr2L 927858 intron CG4341 + chr2L 927948 intron CG4341 + chr2L 928037 intron CG4341 + chr2L_4_925001 chr2L_925001 RAL-531 23 chr2L 931615 931660 chr2L 931714 931744 8 96 1.0 3.0 2.0 2.7 129 chr2L 931615 intron CG4341 + chr2L 931680 intron CG4341 + chr2L 931744 intron CG4341 + chr2L_8_930001 chr2L_930001 RAL-531 24 chr2L 976862 976892 chr2L 984518 984518 roo 7 7649 5.5 2.5 4.0 1.4 7656 chr2L 976862 intergenic not near genes chr2L 980690 intergenic not near genes chr2L 984518 intergenic not near genes chr2L_7_980001 chr2L_980001 RAL-531 25 chr2L 996706 996748 chr2L 1005821 1005862 roo 10 9114 0.0 3.0 1.5 4.0 9156 chr2L 996706 intergenic not near genes chr2L 1001284 intergenic not near genes chr2L 1005862 intergenic not near genes chr2L_10_1000001 chr2L_1000001 RAL-531 26 chr2L 1022995 1023033 chr2L 1023095 1023133 7 98 2.0 3.0 2.5 2.0 138 chr2L 1022995 intron IA-2 - chr2L 1023064 intron IA-2 - chr2L 1023133 intron IA-2 - chr2L_7_1020001 chr2L_1020001 RAL-531 27 chr2L 1042603 1042614 chr2L 1042700 1042711 5 97 2.5 0.0 1.2 2.3 108 chr2L 1042603 intron IA-2 - chr2L 1042657 intron IA-2 - chr2L 1042711 intron IA-2 - chr2L_5_1040001 chr2L_1040001 RAL-531 28 chr2L 1220122 1220160 chr2L 1227599 1227646 blood 8 7482 2.0 2.0 2.0 2.7 7524 chr2L 1220122 intron CG42329 + chr2L 1223884 intron CG42329 + chr2L 1227646 intron CG42329 + chr2L_8_1220001 chr2L_1220001 RAL-531 29 chr2L 1393972 1394010 chr2L 1394068 1394107 9 95 5.0 0.0 2.5 2.6 135 chr2L 1393972 intron lea - chr2L 1394040 intron lea - chr2L 1394107 intron lea - chr2L_9_1390001 chr2L_1390001 RAL-531 30 chr2L 1482954 1483006 chr2L 1483113 1483164 11 157 0.5 1.5 1.0 5.5 210 chr2L 1482954 intergenic not near genes chr2L 1483059 intergenic not near genes chr2L 1483164 intergenic not near genes chr2L_11_1480001 chr2L_1480001 RAL-531 31 chr2L 1568803 1568853 chr2L 1568922 1568951 12 105 5.0 3.0 4.0 2.4 148 chr2L 1568803 intron haf + chr2L 1568877 intron haf + chr2L 1568951 intron haf + chr2L_12_1565001 chr2L_1565001 RAL-531 32 chr2L 1570669 1570715 chr2L 1573561 1573607 F-element 12 2892 4.0 2.5 3.2 2.9 2938 chr2L 1570669 intron haf + chr2L 1572138 intron haf + chr2L 1573607 intron haf + chr2L_12_1570001 chr2L_1570001 RAL-531 33 chr2L 1591870 1591885 chr2L 1591956 1591989 4 98 4.5 6.5 5.5 0.6 119 chr2L 1591870 intron haf + chr2L 1591930 intron haf + chr2L 1591989 intron haf + chr2L_4_1590001 chr2L_1590001 RAL-531 34 chr2L 1620269 1620291 chr2L 1620365 1620387 14 96 0.0 5.0 2.5 4.0 118 chr2L 1620269 3` UTR CR44603 - chr2L 1620328 3` UTR CR44603 - chr2L 1620387 3` UTR CR44603 - chr2L_14_1620001 chr2L_1620001 RAL-531 35 chr2L 1669010 1669042 chr2L 1669110 1669143 13 101 2.0 1.5 1.8 4.6 133 chr2L 1669010 intron chinmo + chr2L 1669076 intron chinmo + chr2L 1669143 intron chinmo + chr2L_13_1665001 chr2L_1665001 RAL-531 36 chr2L 1678955 1679000 chr2L 1686440 1686485 blood 18 7481 4.0 6.0 5.0 3.0 7530 chr2L 1678955 intron chinmo + chr2L 1682720 intron chinmo + chr2L 1686485 intron chinmo + chr2L_18_1680001 chr2L_1680001 RAL-531 37 chr2L 1692057 1692104 chr2L 1692158 1692205 9 98 3.0 5.0 4.0 1.8 148 chr2L 1692057 intron chinmo + chr2L 1692131 intron chinmo + chr2L 1692205 intron chinmo + chr2L_9_1690001 chr2L_1690001 RAL-531 38 chr2L 1842266 1842319 chr2L 1842365 1842415 6 93 2.0 3.0 2.5 1.7 149 chr2L 1842266 intron wry + chr2L 1842340 intron wry + chr2L 1842415 intron wry + chr2L_6_1840001 chr2L_1840001 RAL-531 39 chr2L 1852988 1852991 chr2L 1853092 1853095 4 104 1.5 0.0 0.8 2.2 107 chr2L 1852988 intron wry + chr2L 1853042 intron wry + chr2L 1853095 intron wry + chr2L_4_1850001 chr2L_1850001 RAL-531 40 chr2L 1883348 1883390 chr2L 1883497 1883529 8 147 3.5 4.5 4.0 1.6 181 chr2L 1883348 intron CG15358 - chr2L 1883438 intron CG15358 - chr2L 1883529 intron CG15358 - chr2L_8_1880001 chr2L_1880001 RAL-531 41 chr2L 1925470 1925500 chr2L 1925567 1925597 4 97 3.0 4.0 3.5 0.9 127 chr2L 1925470 intron CG7337 + chr2L 1925534 intron CG7337 + chr2L 1925597 intron CG7337 + chr2L_4_1925001 chr2L_1925001 RAL-531 42 chr2L 1930591 1930614 chr2L 1930689 1930712 11 96 3.5 3.5 3.5 2.4 121 chr2L 1930591 intron CG7337 + chr2L 1930652 intron CG7337 + chr2L 1930712 intron CG7337 + chr2L_11_1930001 chr2L_1930001 RAL-531 43 chr2L 1938283 1938338 chr2L 1938413 1938468 9 121 1.5 0.0 0.8 5.0 185 chr2L 1938283 intron CG7337 + chr2L 1938376 intron CG7337 + chr2L 1938468 intron CG7337 + chr2L_9_1935001 chr2L_1935001 RAL-531 44 chr2L 1946710 1946755 chr2L 1946803 1946830 11 92 4.0 0.0 2.0 3.7 120 chr2L 1946710 5` UTR CG33673 - chr2L 1946770 intergenic CG33673 - chr2L 1946830 intergenic CG33673 - chr2L_11_1945001 chr2L_1945001 RAL-531 45 chr2L 1948610 1948627 chr2L 1948737 1948752 4 126 0.0 1.0 0.5 2.7 142 chr2L 1948610 intergenic not near genes chr2L 1948681 intergenic not near genes chr2L 1948752 intergenic not near genes chr2L_4_1945001 chr2L_1945001 RAL-531 46 chr2L 2075493 2075544 chr2L 2075598 2075650 21 104 1.5 1.5 1.5 8.4 157 chr2L 2075493 intron dpr3 - chr2L 2075572 intron dpr3 - chr2L 2075650 intron dpr3 - chr2L_21_2075001 chr2L_2075001 RAL-531 47 chr2L 2112093 2112146 chr2L 2119775 2119821 opus 9 7662 0.5 1.0 0.8 5.0 7728 chr2L 2112093 intergenic not near genes chr2L 2115957 intergenic not near genes chr2L 2119821 intergenic not near genes chr2L_9_2115001 chr2L_2115001 RAL-531 48 chr2L 2236193 2236212 chr2L 2236280 2236284 5 87 3.5 2.0 2.8 1.3 91 chr2L 2236193 intron Sec24CD - chr2L 2236238 intron Sec24CD - chr2L 2236284 intron Sec24CD - chr2L_5_2235001 chr2L_2235001 RAL-531 49 chr2L 2260786 2260832 chr2L 2260892 2260932 7 105 1.5 3.5 2.5 2.0 146 chr2L 2260786 intergenic not near genes chr2L 2260859 intergenic not near genes chr2L 2260932 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-531 50 chr2L 2311063 2311082 chr2L 2311178 2311193 4 113 0.5 1.5 1.0 2.0 130 chr2L 2311063 intron CG9967 - chr2L 2311128 intron CG9967 - chr2L 2311193 intron CG9967 - chr2L_4_2310001 chr2L_2310001 RAL-531 51 chr2L 2317101 2317132 chr2L 2317292 2317323 7 191 22.0 22.0 22.0 0.3 222 chr2L 2317101 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317323 intron,intron CG9967 -,eys + chr2L_7_2315001 chr2L_2315001 RAL-531 52 chr2L 2331605 2331620 chr2L 2331701 2331715 10 95 6.0 3.0 4.5 1.8 110 chr2L 2331605 intron,intron CG9967 -,eys + chr2L 2331660 intron,intron CG9967 -,eys + chr2L 2331715 intron,intron CG9967 -,eys + chr2L_10_2330001 chr2L_2330001 RAL-531 53 chr2L 2333024 2333070 chr2L 2333158 2333204 11 128 3.0 2.0 2.5 3.1 180 chr2L 2333024 intron,intron CG9967 -,eys + chr2L 2333114 intron,intron CG9967 -,eys + chr2L 2333204 intron,intron CG9967 -,eys + chr2L_11_2330001 chr2L_2330001 RAL-531 54 chr2L 2372352 2372402 chr2L 2372451 2372502 4 101 0.0 1.0 0.5 2.7 150 chr2L 2372352 intergenic CG3609 - chr2L 2372427 intergenic CG3609 - chr2L 2372502 3` UTR CG3609 - chr2L_4_2370001 chr2L_2370001 RAL-531 55 chr2L 2431942 2431981 chr2L 2432333 2432372 5 390 3.0 6.0 4.5 0.9 430 chr2L 2431942 intron dpp + chr2L 2432157 intron dpp + chr2L 2432372 intron dpp + chr2L_5_2430001 chr2L_2430001 RAL-531 56 chr2L 2504219 2504232 chr2L 2504308 2504330 4 96 2.5 2.5 2.5 1.1 111 chr2L 2504219 intergenic not near genes chr2L 2504274 intergenic not near genes chr2L 2504330 intergenic not near genes chr2L_4_2500001 chr2L_2500001 RAL-531 57 chr2L 2565544 2565571 chr2L 2571636 2571663 297 9 6089 1.5 1.5 1.5 3.6 6119 chr2L 2565544 exon Cyp309a2 - chr2L 2568604 intron Cyp309a2 - chr2L 2571663 exon Cyp309a2 - chr2L_9_2565001 chr2L_2565001 RAL-531 58 chr2L 2618020 2618059 chr2L 2618113 2618126 8 86 3.0 0.5 1.8 2.9 106 chr2L 2618020 intergenic not near genes chr2L 2618073 intergenic not near genes chr2L 2618126 intergenic not near genes chr2L_8_2615001 chr2L_2615001 RAL-531 59 chr2L 2772596 2772622 chr2L 2779194 2779225 297 11 6603 5.5 7.5 6.5 1.5 6629 chr2L 2772596 3` UTR Syt1 - chr2L 2775910 intron Syt1 - chr2L 2779225 3` UTR Syt1 - chr2L_11_2775001 chr2L_2775001 RAL-531 60 chr2L 2800590 2800611 chr2L 2800693 2800714 4 103 3.0 0.0 1.5 1.6 124 chr2L 2800590 intergenic not near genes chr2L 2800652 intergenic not near genes chr2L 2800714 intergenic not near genes chr2L_4_2800001 chr2L_2800001 RAL-531 61 chr2L 2826526 2826574 chr2L 2826633 2826678 8 107 0.0 1.5 0.8 4.4 152 chr2L 2826526 intron Duox - chr2L 2826602 intron Duox - chr2L 2826678 intron Duox - chr2L_8_2825001 chr2L_2825001 RAL-531 62 chr2L 2861915 2862139 chr2L 2862038 2862238 23 119 2.5 5.5 4.0 4.6 323 chr2L 2861915 intron CG2991 + chr2L 2862076 intron CG2991 + chr2L 2862238 intron CG2991 + chr2L_23_2860001 chr2L_2860001 RAL-531 63 chr2L 2871648 2871696 chr2L 2871748 2871796 15 99 3.5 4.5 4.0 3.0 148 chr2L 2871648 exon CG31694 - chr2L 2871722 intron CG31694 - chr2L 2871796 intron CG31694 - chr2L_15_2870001 chr2L_2870001 RAL-531 64 chr2L 2933314 2933332 chr2L 2935477 2935525 pogo 5 2187 1.5 3.5 2.5 1.4 2211 chr2L 2933314 intron lilli + chr2L 2934420 intron lilli + chr2L 2935525 intron lilli + chr2L_5_2930001 chr2L_2930001 RAL-531 65 chr2L 2937399 2937449 chr2L 2937496 2937549 8 98 6.0 1.0 3.5 1.8 150 chr2L 2937399 intron lilli + chr2L 2937474 intron lilli + chr2L 2937549 intron lilli + chr2L_8_2935001 chr2L_2935001 RAL-531 66 chr2L 2964289 2964302 chr2L 2964387 2964400 6 97 7.0 3.0 5.0 1.0 111 chr2L 2964289 3` UTR Rbp9 + chr2L 2964344 3` UTR Rbp9 + chr2L 2964400 3` UTR Rbp9 + chr2L_6_2960001 chr2L_2960001 RAL-531 67 chr2L 3073012 3073059 chr2L 3078235 3078271 copia 12 5219 3.5 4.5 4.0 2.4 5259 chr2L 3073012 intron toc - chr2L 3075642 intron toc - chr2L 3078271 intron toc - chr2L_12_3075001 chr2L_3075001 RAL-531 68 chr2L 3147276 3147307 chr2L 3147355 3147389 10 83 4.5 1.0 2.8 2.6 113 chr2L 3147276 3` UTR Mad - chr2L 3147332 3` UTR Mad - chr2L 3147389 3` UTR Mad - chr2L_10_3145001 chr2L_3145001 RAL-531 69 chr2L 3202721 3202771 chr2L 3210170 3210220 mdg1 8 7449 3.0 0.0 1.5 3.2 7499 chr2L 3202721 intergenic not near genes chr2L 3206470 intergenic not near genes chr2L 3210220 intergenic CR45336 + chr2L_8_3205001 chr2L_3205001 RAL-531 70 chr2L 3251477 3251524 chr2L 3259062 3259108 springer 11 7584 1.5 4.0 2.8 2.9 7631 chr2L 3251477 intergenic not near genes chr2L 3255292 intergenic not near genes chr2L 3259108 intergenic not near genes chr2L_11_3255001 chr2L_3255001 RAL-531 71 chr2L 3261496 3261508 chr2L 3261608 3261619 4 111 3.5 8.5 6.0 0.6 123 chr2L 3261496 intergenic CR45338 -,CR45337 - chr2L 3261558 intergenic CR45338 -,CR45337 - chr2L 3261619 intergenic CR45338 -,CR45337 - chr2L_4_3260001 chr2L_3260001 RAL-531 72 chr2L 3291217 3291265 chr2L 3291317 3291333 6 85 4.5 2.5 3.5 1.3 116 chr2L 3291217 intergenic CG9664 - chr2L 3291275 3` UTR CG9664 - chr2L 3291333 3` UTR CG9664 - chr2L_6_3290001 chr2L_3290001 RAL-531 73 chr2L 3384140 3384177 chr2L 3384261 3384298 6 118 3.0 4.0 3.5 1.3 158 chr2L 3384140 intergenic not near genes chr2L 3384219 intergenic not near genes chr2L 3384298 intergenic not near genes chr2L_6_3380001 chr2L_3380001 RAL-531 74 chr2L 3384180 3384187 chr2L 3384258 3384308 4 110 1.5 1.5 1.5 1.6 128 chr2L 3384180 intergenic not near genes chr2L 3384244 intergenic not near genes chr2L 3384308 intergenic not near genes chr2L_4_3380001 chr2L_3380001 RAL-531 75 chr2L 3388578 3388630 chr2L 3388839 3388891 pogo 17 261 6.0 5.0 5.5 2.6 313 chr2L 3388578 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388891 intergenic CG42460 -,CR44791 + chr2L_17_3385001 chr2L_3385001 RAL-531 76 chr2L 3393263 3393285 chr2L 3393381 3393390 5 115 13.5 3.0 8.2 0.5 127 chr2L 3393263 intergenic not near genes chr2L 3393326 intergenic not near genes chr2L 3393390 intergenic not near genes chr2L_5_3390001 chr2L_3390001 RAL-531 77 chr2L 3393286 3393316 chr2L 3393379 3393434 7 109 7.0 3.0 5.0 1.2 148 chr2L 3393286 intergenic not near genes chr2L 3393360 intergenic not near genes chr2L 3393434 intergenic not near genes chr2L_7_3390001 chr2L_3390001 RAL-531 78 chr2L 3396576 3396621 chr2L 3396793 3396826 16 215 6.0 3.0 4.5 2.9 250 chr2L 3396576 intergenic not near genes chr2L 3396701 intergenic not near genes chr2L 3396826 intergenic CR44792 - chr2L_16_3395001 chr2L_3395001 RAL-531 79 chr2L 3505426 3505477 chr2L 3505542 3505594 16 117 3.5 1.5 2.5 4.6 168 chr2L 3505426 intron tim - chr2L 3505510 intron tim - chr2L 3505594 intron tim - chr2L_16_3505001 chr2L_3505001 RAL-531 80 chr2L 3508354 3508375 chr2L 3508452 3508473 4 98 0.5 6.0 3.2 1.0 119 chr2L 3508354 intergenic tim -,CR45299 + chr2L 3508414 intergenic CR45299 +,tim - chr2L 3508473 intergenic CR45299 +,tim - chr2L_4_3505001 chr2L_3505001 RAL-531 81 chr2L 3569954 3569972 chr2L 3570092 3570113 8 140 8.0 0.0 4.0 1.6 159 chr2L 3569954 intergenic not near genes chr2L 3570034 intergenic not near genes chr2L 3570113 intergenic not near genes chr2L_8_3570001 chr2L_3570001 RAL-531 82 chr2L 3582896 3582905 chr2L 3582980 3582987 4 90 1.0 2.5 1.8 1.4 91 chr2L 3582896 intergenic not near genes chr2L 3582942 intergenic not near genes chr2L 3582987 intergenic not near genes chr2L_4_3580001 chr2L_3580001 RAL-531 83 chr2L 3634084 3634134 chr2L 3634186 3634226 18 99 2.0 3.5 2.8 4.7 142 chr2L 3634084 intron for - chr2L 3634155 intron for - chr2L 3634226 intron for - chr2L_18_3630001 chr2L_3630001 RAL-531 84 chr2L 3649782 3649792 chr2L 3654999 3655014 copia 6 5220 0.5 7.0 3.8 1.2 5232 chr2L 3649782 intron for - chr2L 3652398 intron for - chr2L 3655014 intron for - chr2L_6_3650001 chr2L_3650001 RAL-531 85 chr2L 3696099 3696120 chr2L 3696195 3696195 5 91 3.0 8.0 5.5 0.8 96 chr2L 3696099 intergenic CG16712 - chr2L 3696147 intergenic CG16712 - chr2L 3696195 intergenic CG16712 - chr2L_5_3695001 chr2L_3695001 RAL-531 86 chr2L 3819021 3819048 chr2L 3819123 3819150 9 101 2.5 0.0 1.2 4.1 129 chr2L 3819021 intergenic CR44077 + chr2L 3819086 intergenic not near genes chr2L 3819150 intergenic not near genes chr2L_9_3815001 chr2L_3815001 RAL-531 87 chr2L 3862418 3862514 chr2L 3862511 3862621 4 92 0.5 0.5 0.5 2.7 203 chr2L 3862418 intergenic CG3964 +,CR44078 - chr2L 3862520 intergenic CG3964 +,CR44078 - chr2L 3862621 intergenic CG3964 + chr2L_4_3860001 chr2L_3860001 RAL-531 88 chr2L 3891897 3891919 chr2L 3891984 3892005 5 94 3.5 5.0 4.2 1.0 108 chr2L 3891897 intron capu - chr2L 3891951 intron capu - chr2L 3892005 intron capu - chr2L_5_3890001 chr2L_3890001 RAL-531 89 chr2L 3943776 3943826 chr2L 3943887 3943937 12 111 1.0 1.0 1.0 6.0 161 chr2L 3943776 intron fred - chr2L 3943856 intron fred - chr2L 3943937 intron fred - chr2L_12_3940001 chr2L_3940001 RAL-531 90 chr2L 3950067 3950105 chr2L 3950158 3950201 13 95 3.0 4.0 3.5 2.9 134 chr2L 3950067 intron fred - chr2L 3950134 intron fred - chr2L 3950201 intron fred - chr2L_13_3950001 chr2L_3950001 RAL-531 91 chr2L 3997527 3997576 chr2L 3997637 3997684 6 101 0.0 3.0 1.5 2.4 157 chr2L 3997527 intergenic not near genes chr2L 3997606 intergenic not near genes chr2L 3997684 intergenic not near genes chr2L_6_3995001 chr2L_3995001 RAL-531 92 chr2L 4037780 4037808 chr2L 4037887 4037915 7 107 2.5 2.5 2.5 2.0 135 chr2L 4037780 intron ed + chr2L 4037848 intron ed + chr2L 4037915 intron ed + chr2L_7_4035001 chr2L_4035001 RAL-531 93 chr2L 4117741 4117774 chr2L 4117841 4117869 5 98 0.5 0.0 0.2 4.2 128 chr2L 4117741 intergenic not near genes chr2L 4117805 intergenic not near genes chr2L 4117869 intergenic not near genes chr2L_5_4115001 chr2L_4115001 RAL-531 94 chr2L 4166359 4166407 chr2L 4166461 4166482 9 94 0.5 3.5 2.0 3.0 123 chr2L 4166359 intergenic Or24a - chr2L 4166420 intergenic Or24a - chr2L 4166482 intergenic Or24a - chr2L_9_4165001 chr2L_4165001 RAL-531 95 chr2L 4184456 4184506 chr2L 4184795 4184845 8 339 0.0 3.0 1.5 3.2 389 chr2L 4184456 intergenic not near genes chr2L 4184650 intergenic not near genes chr2L 4184845 intergenic not near genes chr2L_8_4180001 chr2L_4180001 RAL-531 96 chr2L 4243697 4243724 chr2L 4243799 4243817 4 104 2.5 4.5 3.5 0.9 120 chr2L 4243697 intergenic not near genes chr2L 4243757 intergenic not near genes chr2L 4243817 intergenic not near genes chr2L_4_4240001 chr2L_4240001 RAL-531 97 chr2L 4317875 4317912 chr2L 4317972 4317999 9 91 3.5 4.5 4.0 1.8 124 chr2L 4317875 intron tutl + chr2L 4317937 intron tutl + chr2L 4317999 intron tutl + chr2L_9_4315001 chr2L_4315001 RAL-531 98 chr2L 4325617 4325627 chr2L 4325826 4325836 4 209 1.0 0.5 0.8 2.2 219 chr2L 4325617 intron CG16857 + chr2L 4325726 intron CG16857 + chr2L 4325836 intron CG16857 + chr2L_4_4325001 chr2L_4325001 RAL-531 99 chr2L 4601691 4601737 chr2L 4609152 4609197 mdg1 20 7458 0.5 2.5 1.5 8.0 7506 chr2L 4601691 intron dp - chr2L 4605444 intron dp - chr2L 4609197 intron dp - chr2L_20_4605001 chr2L_4605001 RAL-531 100 chr2L 4622048 4622066 chr2L 4622137 4622167 4 98 1.5 0.5 1.0 2.0 119 chr2L 4622048 intergenic not near genes chr2L 4622108 intergenic not near genes chr2L 4622167 intergenic not near genes chr2L_4_4620001 chr2L_4620001 RAL-531 101 chr2L 4661823 4661858 chr2L 4669423 4669455 opus 4 7595 2.0 7.5 4.8 0.7 7632 chr2L 4661823 intergenic not near genes chr2L 4665639 intergenic not near genes chr2L 4669455 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-531 102 chr2L 4793295 4793322 chr2L 4793610 4793637 6 313 1.0 0.5 0.8 3.3 342 chr2L 4793295 intron CG15630 - chr2L 4793466 intron CG15630 - chr2L 4793637 exon CG15630 - chr2L_6_4790001 chr2L_4790001 RAL-531 103 chr2L 4891639 4891685 chr2L 4891739 4891788 5 101 1.0 1.0 1.0 2.5 149 chr2L 4891639 intergenic CG15625 +,CG3036 + chr2L 4891714 intergenic CG3036 +,CG15625 + chr2L 4891788 intergenic CG3036 + chr2L_5_4890001 chr2L_4890001 RAL-531 104 chr2L 4918149 4918163 chr2L 4923242 4923256 jockey 10 5093 5.0 0.0 2.5 2.9 5107 chr2L 4918149 intron hoe1 - chr2L 4920702 intron hoe1 - chr2L 4923256 intron hoe1 - chr2L_10_4920001 chr2L_4920001 RAL-531 105 chr2L 4925657 4925696 chr2L 4925756 4925795 4 99 2.0 2.0 2.0 1.3 138 chr2L 4925657 intron hoe1 - chr2L 4925726 intron hoe1 - chr2L 4925795 intron hoe1 - chr2L_4_4925001 chr2L_4925001 RAL-531 106 chr2L 5027944 5027991 chr2L 5028048 5028088 12 97 5.0 4.5 4.8 2.1 144 chr2L 5027944 intron vkg - chr2L 5028016 intron vkg - chr2L 5028088 intron vkg - chr2L_12_5025001 chr2L_5025001 RAL-531 107 chr2L 5061413 5061454 chr2L 5061505 5061524 11 92 7.5 6.0 6.8 1.4 111 chr2L 5061413 intron qtc + chr2L 5061468 intron qtc + chr2L 5061524 intron qtc + chr2L_11_5060001 chr2L_5060001 RAL-531 108 chr2L 5083725 5083775 chr2L 5083821 5083868 18 90 1.0 1.5 1.2 8.2 143 chr2L 5083725 intron pgant5 - chr2L 5083796 intron pgant5 - chr2L 5083868 intron pgant5 - chr2L_18_5080001 chr2L_5080001 RAL-531 109 chr2L 5092392 5092442 chr2L 5092498 5092549 11 106 2.0 4.5 3.2 2.6 157 chr2L 5092392 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092549 intron pgant5 - chr2L_11_5090001 chr2L_5090001 RAL-531 110 chr2L 5117282 5117321 chr2L 5117384 5117423 12 98 4.5 2.5 3.5 2.7 141 chr2L 5117282 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117423 intron Msp300 + chr2L_12_5115001 chr2L_5115001 RAL-531 111 chr2L 5147707 5147738 chr2L 5147959 5147990 5 251 3.0 5.0 4.0 1.0 283 chr2L 5147707 intron Msp300 + chr2L 5147848 intron Msp300 + chr2L 5147990 intron Msp300 + chr2L_5_5145001 chr2L_5145001 RAL-531 112 chr2L 5147741 5147756 chr2L 5147957 5148008 9 233 1.5 4.0 2.8 2.4 267 chr2L 5147741 intron Msp300 + chr2L 5147874 intron Msp300 + chr2L 5148008 intron Msp300 + chr2L_9_5145001 chr2L_5145001 RAL-531 113 chr2L 5342764 5342799 chr2L 5345149 5345199 Doc 8 2397 7.5 9.0 8.2 0.9 2435 chr2L 5342764 intergenic not near genes chr2L 5343982 intergenic not near genes chr2L 5345199 intergenic not near genes chr2L_8_5340001 chr2L_5340001 RAL-531 114 chr2L 5378416 5378451 chr2L 5378510 5378550 15 97 3.0 3.0 3.0 3.8 134 chr2L 5378416 intergenic not near genes chr2L 5378483 intergenic not near genes chr2L 5378550 intergenic not near genes chr2L_15_5375001 chr2L_5375001 RAL-531 115 chr2L 5433828 5433874 chr2L 5433926 5433974 6 94 7.5 3.0 5.2 1.0 146 chr2L 5433828 3` UTR CR43715 - chr2L 5433901 3` UTR CR43715 - chr2L 5433974 3` UTR CR43715 - chr2L_6_5430001 chr2L_5430001 RAL-531 116 chr2L 5445497 5445528 chr2L 5445592 5445621 6 95 2.5 2.5 2.5 1.7 124 chr2L 5445497 intergenic not near genes chr2L 5445559 intergenic not near genes chr2L 5445621 intergenic not near genes chr2L_6_5445001 chr2L_5445001 RAL-531 117 chr2L 5511308 5511315 chr2L 5511411 5511414 4 102 6.0 3.0 4.5 0.7 106 chr2L 5511308 intergenic not near genes chr2L 5511361 intergenic not near genes chr2L 5511414 intergenic not near genes chr2L_4_5510001 chr2L_5510001 RAL-531 118 chr2L 5511318 5511356 chr2L 5511410 5511447 12 101 2.5 3.0 2.8 3.2 129 chr2L 5511318 intergenic not near genes chr2L 5511382 intergenic not near genes chr2L 5511447 intergenic not near genes chr2L_12_5510001 chr2L_5510001 RAL-531 119 chr2L 5520235 5520275 chr2L 5520328 5520350 6 87 5.5 1.0 3.2 1.4 115 chr2L 5520235 5` UTR cl + chr2L 5520292 5` UTR cl + chr2L 5520350 5` UTR cl + chr2L_6_5520001 chr2L_5520001 RAL-531 120 chr2L 5695840 5695891 chr2L 5695952 5696003 12 109 3.0 8.5 5.8 1.8 163 chr2L 5695840 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696003 intergenic not near genes chr2L_12_5695001 chr2L_5695001 RAL-531 121 chr2L 5762427 5762473 chr2L 5762532 5762578 12 105 7.0 6.0 6.5 1.6 151 chr2L 5762427 intergenic CG11030 +,obst-E - chr2L 5762502 intergenic obst-E -,CG11030 + chr2L 5762578 3` UTR obst-E - chr2L_12_5760001 chr2L_5760001 RAL-531 122 chr2L 5780889 5780907 chr2L 5781014 5781032 6 125 8.5 4.5 6.5 0.8 143 chr2L 5780889 intron CG9171 - chr2L 5780960 intron CG9171 - chr2L 5781032 intron CG9171 - chr2L_6_5780001 chr2L_5780001 RAL-531 123 chr2L 5780908 5780929 chr2L 5781010 5781054 8 119 5.5 4.0 4.8 1.4 146 chr2L 5780908 intron CG9171 - chr2L 5780981 intron CG9171 - chr2L 5781054 intron CG9171 - chr2L_8_5780001 chr2L_5780001 RAL-531 124 chr2L 5806021 5806056 chr2L 5806154 5806191 15 135 5.5 6.0 5.8 2.2 170 chr2L 5806021 intron CG11034 + chr2L 5806106 intron CG11034 + chr2L 5806191 intron CG11034 + chr2L_15_5805001 chr2L_5805001 RAL-531 125 chr2L 5814677 5814708 chr2L 5814780 5814811 11 102 4.5 4.0 4.2 2.1 134 chr2L 5814677 intergenic not near genes chr2L 5814744 intergenic not near genes chr2L 5814811 intergenic not near genes chr2L_11_5810001 chr2L_5810001 RAL-531 126 chr2L 5825055 5825105 chr2L 5825160 5825209 15 111 3.5 0.0 1.8 5.4 154 chr2L 5825055 5` UTR TrissinR + chr2L 5825132 5` UTR TrissinR + chr2L 5825209 5` UTR TrissinR + chr2L_15_5825001 chr2L_5825001 RAL-531 127 chr2L 5827719 5827741 chr2L 5836722 5836759 roo 6 9013 3.5 4.5 4.0 1.2 9040 chr2L 5827719 intron TrissinR + chr2L 5832239 intron TrissinR + chr2L 5836759 intron TrissinR + chr2L_6_5830001 chr2L_5830001 RAL-531 128 chr2L 5839072 5839119 chr2L 5839172 5839210 8 92 4.0 0.5 2.2 2.5 138 chr2L 5839072 intron TrissinR + chr2L 5839141 intron TrissinR + chr2L 5839210 intron TrissinR + chr2L_8_5835001 chr2L_5835001 RAL-531 129 chr2L 5989045 5989050 chr2L 5989113 5989143 5 86 7.0 0.5 3.8 1.0 98 chr2L 5989045 intergenic ifc +,lid - chr2L 5989094 intergenic ifc +,lid - chr2L 5989143 intergenic lid -,ifc + chr2L_5_5985001 chr2L_5985001 RAL-531 130 chr2L 6037017 6037061 chr2L 6037115 6037159 17 95 4.5 5.0 4.8 2.9 142 chr2L 6037017 3` UTR CG9117 - chr2L 6037088 3` UTR CG9117 - chr2L 6037159 exon CG9117 - chr2L_17_6035001 chr2L_6035001 RAL-531 131 chr2L 6050432 6050468 chr2L 6050555 6050592 13 121 7.0 4.0 5.5 2.0 160 chr2L 6050432 3` UTR CG12393 + chr2L 6050512 intergenic CG12393 +,CG9135 + chr2L 6050592 intergenic CG12393 +,CG9135 + chr2L_13_6050001 chr2L_6050001 RAL-531 132 chr2L 6103223 6103232 chr2L 6103300 6103304 5 84 5.5 3.0 4.2 1.0 81 chr2L 6103223 intron stai + chr2L 6103264 intron stai + chr2L 6103304 intron stai + chr2L_5_6100001 chr2L_6100001 RAL-531 133 chr2L 6106222 6106237 chr2L 6106332 6106335 7 108 1.0 7.5 4.2 1.3 113 chr2L 6106222 intron stai + chr2L 6106278 intron stai + chr2L 6106335 intron stai + chr2L_7_6105001 chr2L_6105001 RAL-531 134 chr2L 6108773 6108822 chr2L 6108875 6108923 11 99 2.0 1.5 1.8 3.9 150 chr2L 6108773 intron stai + chr2L 6108848 intron stai + chr2L 6108923 intron stai + chr2L_11_6105001 chr2L_6105001 RAL-531 135 chr2L 6137412 6137455 chr2L 6137605 6137650 14 189 1.5 4.0 2.8 3.7 238 chr2L 6137412 intergenic not near genes chr2L 6137531 intergenic not near genes chr2L 6137650 intergenic not near genes chr2L_14_6135001 chr2L_6135001 RAL-531 136 chr2L 6157276 6157299 chr2L 6157374 6157408 10 107 1.0 7.0 4.0 2.0 132 chr2L 6157276 intergenic not near genes chr2L 6157342 intergenic not near genes chr2L 6157408 intergenic not near genes chr2L_10_6155001 chr2L_6155001 RAL-531 137 chr2L 6229252 6229293 chr2L 6229893 6229913 17 637 3.5 0.0 1.8 6.1 661 chr2L 6229252 intergenic not near genes chr2L 6229582 intergenic not near genes chr2L 6229913 intergenic not near genes chr2L_17_6225001 chr2L_6225001 RAL-531 138 chr2L 6242956 6242983 chr2L 6243074 6243101 5 118 7.0 1.5 4.2 1.0 145 chr2L 6242956 intergenic not near genes chr2L 6243028 intergenic not near genes chr2L 6243101 intergenic not near genes chr2L_5_6240001 chr2L_6240001 RAL-531 139 chr2L 6283925 6283977 chr2L 6284055 6284063 4 119 0.0 1.5 0.8 2.2 138 chr2L 6283925 intron Ddr + chr2L 6283994 intron Ddr + chr2L 6284063 intron Ddr + chr2L_4_6280001 chr2L_6280001 RAL-531 140 chr2L 6308293 6308343 chr2L 6308394 6308437 19 102 3.5 2.5 3.0 4.8 144 chr2L 6308293 intron Ddr + chr2L 6308365 intron Ddr + chr2L 6308437 intron,3` UTR Ddr +,CG43922 - chr2L_19_6305001 chr2L_6305001 RAL-531 141 chr2L 6318714 6318758 chr2L 6318888 6318932 8 170 3.5 4.5 4.0 1.6 218 chr2L 6318714 intron Ddr + chr2L 6318823 intron Ddr + chr2L 6318932 intron Ddr + chr2L_8_6315001 chr2L_6315001 RAL-531 142 chr2L 6363146 6363181 chr2L 6366078 6366114 Burdock 5 2934 5.5 4.5 5.0 0.8 2968 chr2L 6363146 intergenic not near genes chr2L 6364630 intergenic not near genes chr2L 6366114 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-531 143 chr2L 6379314 6379345 chr2L 6379411 6379442 4 97 1.0 1.0 1.0 2.0 128 chr2L 6379314 intron CG42368 - chr2L 6379378 intron CG42368 - chr2L 6379442 intron CG42368 - chr2L_4_6375001 chr2L_6375001 RAL-531 144 chr2L 6414973 6414986 chr2L 6415084 6415097 7 111 7.5 6.5 7.0 0.9 124 chr2L 6414973 3` UTR CG13982 + chr2L 6415035 3` UTR CG13982 + chr2L 6415097 3` UTR CG13982 + chr2L_7_6415001 chr2L_6415001 RAL-531 145 chr2L 6414991 6415018 chr2L 6415076 6415124 12 104 6.0 5.0 5.5 1.8 133 chr2L 6414991 3` UTR CG13982 + chr2L 6415058 3` UTR CG13982 + chr2L 6415124 3` UTR CG13982 + chr2L_12_6415001 chr2L_6415001 RAL-531 146 chr2L 6426834 6426889 chr2L 6445114 6445126 roo 13 18275 4.0 2.0 3.0 3.2 18292 chr2L 6426834 3` UTR CG9527 - chr2L 6435980 intron CG9527 - chr2L 6445126 exon CG9527 - chr2L_13_6435001 chr2L_6435001 RAL-531 147 chr2L 6453585 6453631 chr2L 6453686 6453731 7 101 1.5 4.0 2.8 1.8 146 chr2L 6453585 intron retm - chr2L 6453658 intron retm - chr2L 6453731 intron retm - chr2L_7_6450001 chr2L_6450001 RAL-531 148 chr2L 6516024 6516074 chr2L 6516126 6516151 17 96 2.0 4.5 3.2 4.0 127 chr2L 6516024 intron CG31637 + chr2L 6516088 intron CG31637 + chr2L 6516151 intron CG31637 + chr2L_17_6515001 chr2L_6515001 RAL-531 149 chr2L 6640898 6640931 chr2L 6641000 6641046 9 108 3.0 2.0 2.5 2.6 148 chr2L 6640898 exon CG31635 - chr2L 6640972 intron CG31635 - chr2L 6641046 intron CG31635 - chr2L_9_6640001 chr2L_6640001 RAL-531 150 chr2L 6724509 6724554 chr2L 6724612 6724657 6 102 0.5 1.0 0.8 3.3 148 chr2L 6724509 intron Liprin-alpha + chr2L 6724583 intron Liprin-alpha + chr2L 6724657 intron Liprin-alpha + chr2L_6_6720001 chr2L_6720001 RAL-531 151 chr2L 6799528 6799535 chr2L 6799636 6799643 4 108 7.5 4.5 6.0 0.6 115 chr2L 6799528 5` UTR CR43610 + chr2L 6799586 5` UTR CR43610 + chr2L 6799643 intergenic CR43610 +,CG17376 - chr2L_4_6795001 chr2L_6795001 RAL-531 152 chr2L 6799541 6799572 chr2L 6799627 6799680 7 102 1.5 4.0 2.8 1.8 139 chr2L 6799541 5` UTR CR43610 + chr2L 6799610 intergenic CR43610 +,CG17376 - chr2L 6799680 intergenic CR43610 +,CG17376 - chr2L_7_6795001 chr2L_6795001 RAL-531 153 chr2L 6850358 6850405 chr2L 6850461 6850508 10 103 5.5 1.5 3.5 2.2 150 chr2L 6850358 intergenic not near genes chr2L 6850433 intergenic not near genes chr2L 6850508 intergenic not near genes chr2L_10_6850001 chr2L_6850001 RAL-531 154 chr2L 6950139 6950188 chr2L 6950363 6950406 9 217 3.0 2.5 2.8 2.4 267 chr2L 6950139 5` UTR Gas41 - chr2L 6950272 intergenic Gas41 -,SA + chr2L 6950406 intergenic SA +,Gas41 - chr2L_9_6950001 chr2L_6950001 RAL-531 155 chr2L 7043512 7043568 chr2L 7043666 7043722 5 154 0.0 5.5 2.8 1.3 210 chr2L 7043512 intron milt + chr2L 7043617 intron milt + chr2L 7043722 intron milt + chr2L_5_7040001 chr2L_7040001 RAL-531 156 chr2L 7081700 7081729 chr2L 7081800 7081830 11 101 7.0 4.0 5.5 1.7 130 chr2L 7081700 intron Pvf2 - chr2L 7081765 intron Pvf2 - chr2L 7081830 intron Pvf2 - chr2L_11_7080001 chr2L_7080001 RAL-531 157 chr2L 7089592 7089636 chr2L 7089694 7089741 11 103 0.0 4.0 2.0 3.7 149 chr2L 7089592 intergenic not near genes chr2L 7089666 intergenic not near genes chr2L 7089741 intergenic not near genes chr2L_11_7085001 chr2L_7085001 RAL-531 158 chr2L 7125769 7125810 chr2L 7125905 7125906 11 131 2.5 4.5 3.5 2.4 137 chr2L 7125769 intron Pvf3 - chr2L 7125838 intron Pvf3 - chr2L 7125906 intron Pvf3 - chr2L_11_7125001 chr2L_7125001 RAL-531 159 chr2L 7126840 7126878 chr2L 7126939 7126977 15 98 2.0 0.0 1.0 7.5 137 chr2L 7126840 intron Pvf3 - chr2L 7126908 intron Pvf3 - chr2L 7126977 intron Pvf3 - chr2L_15_7125001 chr2L_7125001 RAL-531 160 chr2L 7225234 7225265 chr2L 7225331 7225369 20 103 4.5 4.0 4.2 3.8 135 chr2L 7225234 intron Ndae1 - chr2L 7225302 intron Ndae1 - chr2L 7225369 intron Ndae1 - chr2L_20_7225001 chr2L_7225001 RAL-531 161 chr2L 7228095 7228144 chr2L 7228201 7228250 14 105 4.5 7.5 6.0 2.0 155 chr2L 7228095 intron,exon Ndae1 -,CG43799 + chr2L 7228172 intron,exon Ndae1 -,CG43799 + chr2L 7228250 intron,exon Ndae1 -,CG43799 + chr2L_14_7225001 chr2L_7225001 RAL-531 162 chr2L 7244701 7244754 chr2L 7244846 7244899 11 144 3.0 4.5 3.8 2.3 198 chr2L 7244701 intron Ndae1 - chr2L 7244800 intron Ndae1 - chr2L 7244899 intron Ndae1 - chr2L_11_7240001 chr2L_7240001 RAL-531 163 chr2L 7258491 7258512 chr2L 7258681 7258701 6 193 2.5 2.0 2.2 1.9 210 chr2L 7258491 intron Wnt4 - chr2L 7258596 intron Wnt4 - chr2L 7258701 intron Wnt4 - chr2L_6_7255001 chr2L_7255001 RAL-531 164 chr2L 7295974 7296022 chr2L 7296132 7296182 11 157 0.5 4.0 2.2 3.4 208 chr2L 7295974 intergenic not near genes chr2L 7296078 intergenic not near genes chr2L 7296182 intergenic not near genes chr2L_11_7295001 chr2L_7295001 RAL-531 165 chr2L 7301279 7301327 chr2L 7301381 7301430 9 98 1.0 0.0 0.5 6.0 151 chr2L 7301279 intergenic not near genes chr2L 7301354 intergenic not near genes chr2L 7301430 intergenic not near genes chr2L_9_7300001 chr2L_7300001 RAL-531 166 chr2L 7330250 7330293 chr2L 7330349 7330392 13 99 4.0 5.0 4.5 2.4 142 chr2L 7330250 intergenic not near genes chr2L 7330321 intergenic not near genes chr2L 7330392 intergenic not near genes chr2L_13_7330001 chr2L_7330001 RAL-531 167 chr2L 7335181 7335234 chr2L 7335298 7335351 10 117 5.5 4.0 4.8 1.7 170 chr2L 7335181 intron Wnt6 + chr2L 7335266 intron Wnt6 + chr2L 7335351 intron Wnt6 + chr2L_10_7335001 chr2L_7335001 RAL-531 168 chr2L 7340044 7340050 chr2L 7340143 7340148 4 99 0.0 9.0 4.5 0.7 104 chr2L 7340044 intron Wnt6 + chr2L 7340096 intron Wnt6 + chr2L 7340148 intron Wnt6 + chr2L_4_7340001 chr2L_7340001 RAL-531 169 chr2L 7343326 7343352 chr2L 7350441 7350465 roo 5 7127 1.0 4.5 2.8 1.3 7139 chr2L 7343326 intron Wnt6 + chr2L 7346896 intron Wnt6 + chr2L 7350465 intron Wnt6 + chr2L_5_7345001 chr2L_7345001 RAL-531 170 chr2L 7363504 7363552 chr2L 7363602 7363650 17 98 3.0 2.5 2.8 4.5 146 chr2L 7363504 5` UTR Wnt10 + chr2L 7363577 5` UTR Wnt10 + chr2L 7363650 5` UTR Wnt10 + chr2L_17_7360001 chr2L_7360001 RAL-531 171 chr2L 7399285 7399330 chr2L 7399678 7399723 10 392 1.0 6.0 3.5 2.2 438 chr2L 7399285 intergenic not near genes chr2L 7399504 intergenic not near genes chr2L 7399723 intergenic not near genes chr2L_10_7395001 chr2L_7395001 RAL-531 172 chr2L 7436191 7436215 chr2L 7436305 7436329 11 113 4.5 5.0 4.8 1.9 138 chr2L 7436191 intergenic not near genes chr2L 7436260 intergenic not near genes chr2L 7436329 intergenic not near genes chr2L_11_7435001 chr2L_7435001 RAL-531 173 chr2L 7447768 7447810 chr2L 7447883 7447925 17 115 5.0 4.0 4.5 3.1 157 chr2L 7447768 5` UTR santa-maria - chr2L 7447846 5` UTR santa-maria - chr2L 7447925 5` UTR santa-maria - chr2L_17_7445001 chr2L_7445001 RAL-531 174 chr2L 7489697 7489731 chr2L 7489806 7489840 6 109 4.5 6.5 5.5 0.9 143 chr2L 7489697 intron Ziz - chr2L 7489768 intron Ziz - chr2L 7489840 intron Ziz - chr2L_6_7485001 chr2L_7485001 RAL-531 175 chr2L 7502717 7502760 chr2L 7502813 7502856 11 92 3.5 3.5 3.5 2.4 139 chr2L 7502717 intron RapGAP1 - chr2L 7502786 intron RapGAP1 - chr2L 7502856 intron RapGAP1 - chr2L_11_7500001 chr2L_7500001 RAL-531 176 chr2L 7555198 7555233 chr2L 7555295 7555329 8 96 0.5 3.5 2.0 2.7 131 chr2L 7555198 intron RapGAP1 - chr2L 7555264 intron RapGAP1 - chr2L 7555329 intron RapGAP1 - chr2L_8_7555001 chr2L_7555001 RAL-531 177 chr2L 7609667 7609716 chr2L 7609763 7609812 17 95 3.5 3.5 3.5 3.8 145 chr2L 7609667 intron CG6739 + chr2L 7609740 intron CG6739 + chr2L 7609812 intron CG6739 + chr2L_17_7605001 chr2L_7605001 RAL-531 178 chr2L 7742514 7742563 chr2L 7742614 7742663 5 99 0.5 1.5 1.0 2.5 149 chr2L 7742514 intergenic not near genes chr2L 7742588 intergenic not near genes chr2L 7742663 intergenic not near genes chr2L_5_7740001 chr2L_7740001 RAL-531 179 chr2L 7765795 7765808 chr2L 7765909 7765921 7 113 5.5 0.0 2.8 1.8 126 chr2L 7765795 3` UTR CG7196 + chr2L 7765858 3` UTR CG7196 + chr2L 7765921 intergenic CG7196 + chr2L_7_7765001 chr2L_7765001 RAL-531 180 chr2L 7768854 7768880 chr2L 7768936 7768972 8 88 0.0 5.0 2.5 2.3 118 chr2L 7768854 intron CG7191 + chr2L 7768913 intron CG7191 + chr2L 7768972 intron CG7191 + chr2L_8_7765001 chr2L_7765001 RAL-531 181 chr2L 7778827 7778836 chr2L 7778949 7778957 5 122 9.5 0.5 5.0 0.8 130 chr2L 7778827 intergenic not near genes chr2L 7778892 intergenic not near genes chr2L 7778957 intergenic not near genes chr2L_5_7775001 chr2L_7775001 RAL-531 182 chr2L 7829467 7829519 chr2L 7829582 7829634 9 111 0.5 7.0 3.8 1.9 167 chr2L 7829467 intron mts + chr2L 7829550 intron mts + chr2L 7829634 intron mts + chr2L_9_7825001 chr2L_7825001 RAL-531 183 chr2L 7861292 7861339 chr2L 7861414 7861463 17 118 1.0 2.0 1.5 6.8 171 chr2L 7861292 intergenic TwdlE - chr2L 7861378 intergenic not near genes chr2L 7861463 intergenic not near genes chr2L_17_7860001 chr2L_7860001 RAL-531 184 chr2L 7952705 7952717 chr2L 7952862 7952874 4 157 0.5 1.0 0.8 2.2 169 chr2L 7952705 intron Snoo - chr2L 7952790 intron Snoo - chr2L 7952874 intron Snoo - chr2L_4_7950001 chr2L_7950001 RAL-531 185 chr2L 7959022 7959070 chr2L 7960453 7960503 pogo 6 1430 2.5 0.0 1.2 2.7 1481 chr2L 7959022 intron Snoo - chr2L 7959762 intron Snoo - chr2L 7960503 intron Snoo - chr2L_6_7955001 chr2L_7955001 RAL-531 186 chr2L 7977092 7977110 chr2L 7984069 7984105 297 10 6983 2.5 1.0 1.8 3.6 7013 chr2L 7977092 intron Snoo - chr2L 7980598 intron Snoo - chr2L 7984105 intron,5` UTR Snoo -,CG7231 + chr2L_10_7980001 chr2L_7980001 RAL-531 187 chr2L 7986908 7986914 chr2L 7987014 7987020 4 106 3.5 11.0 7.2 0.5 112 chr2L 7986908 3` UTR pes - chr2L 7986964 3` UTR pes - chr2L 7987020 3` UTR pes - chr2L_4_7985001 chr2L_7985001 RAL-531 188 chr2L 8003044 8003052 chr2L 8003121 8003154 9 97 6.5 4.0 5.2 1.5 110 chr2L 8003044 intron Wwox - chr2L 8003099 intron Wwox - chr2L 8003154 intron Wwox - chr2L_9_8000001 chr2L_8000001 RAL-531 189 chr2L 8018818 8018832 chr2L 8023622 8023636 Doc 6 4804 0.0 9.0 4.5 1.1 4818 chr2L 8018818 intron Tg + chr2L 8021227 intron Tg + chr2L 8023636 intron Tg + chr2L_6_8020001 chr2L_8020001 RAL-531 190 chr2L 8143176 8143216 chr2L 8143338 8143387 15 167 0.5 5.0 2.8 3.9 211 chr2L 8143176 intron CG8552 - chr2L 8143282 intron CG8552 - chr2L 8143387 intron CG8552 - chr2L_15_8140001 chr2L_8140001 RAL-531 191 chr2L 8166029 8166066 chr2L 8166139 8166176 7 102 1.5 4.0 2.8 1.8 147 chr2L 8166029 intron Piezo + chr2L 8166102 intron Piezo + chr2L 8166176 intron Piezo + chr2L_7_8165001 chr2L_8165001 RAL-531 192 chr2L 8167126 8167148 chr2L 8167237 8167259 4 111 7.5 4.5 6.0 0.6 133 chr2L 8167126 intron Piezo + chr2L 8167192 intron Piezo + chr2L 8167259 intron Piezo + chr2L_4_8165001 chr2L_8165001 RAL-531 193 chr2L 8167150 8167170 chr2L 8167235 8167271 4 96 5.0 3.5 4.2 0.8 121 chr2L 8167150 intron Piezo + chr2L 8167210 intron Piezo + chr2L 8167271 intron Piezo + chr2L_4_8165001 chr2L_8165001 RAL-531 194 chr2L 8171282 8171298 chr2L 8171378 8171399 7 100 0.0 9.5 4.8 1.2 117 chr2L 8171282 intron Piezo + chr2L 8171340 intron Piezo + chr2L 8171399 intron Piezo + chr2L_7_8170001 chr2L_8170001 RAL-531 195 chr2L 8184911 8184953 chr2L 8185012 8185064 11 107 5.5 2.0 3.8 2.3 153 chr2L 8184911 intron Piezo + chr2L 8184988 intron Piezo + chr2L 8185064 intron Piezo + chr2L_11_8180001 chr2L_8180001 RAL-531 196 chr2L 8244719 8244749 chr2L 8244859 8244891 5 137 1.0 3.5 2.2 1.6 172 chr2L 8244719 intron CG8086 - chr2L 8244805 intron CG8086 - chr2L 8244891 intron CG8086 - chr2L_5_8240001 chr2L_8240001 RAL-531 197 chr2L 8451850 8451855 chr2L 8451984 8451990 7 135 3.5 9.5 6.5 0.9 140 chr2L 8451850 5` UTR fu12 - chr2L 8451920 intron fu12 - chr2L 8451990 intron fu12 - chr2L_7_8450001 chr2L_8450001 RAL-531 198 chr2L 8452417 8452448 chr2L 8461603 8461637 roo 14 9190 3.0 10.0 6.5 1.9 9220 chr2L 8452417 intron fu12 - chr2L 8457027 intron fu12 - chr2L 8461637 intron fu12 - chr2L_14_8455001 chr2L_8455001 RAL-531 199 chr2L 8510119 8510170 chr2L 8510227 8510244 4 96 0.0 1.5 0.8 2.2 125 chr2L 8510119 exon CG13096 - chr2L 8510182 intron CG13096 - chr2L 8510244 intron CG13096 - chr2L_4_8510001 chr2L_8510001 RAL-531 200 chr2L 8525169 8525211 chr2L 8525266 8525310 6 99 8.5 2.0 5.2 1.0 141 chr2L 8525169 3` UTR,3` UTR,3` UTR Acer +,lmgA -,lmgB - chr2L 8525240 3` UTR,3` UTR,3` UTR Acer +,lmgA -,lmgB - chr2L 8525310 3` UTR,3` UTR,3` UTR Acer +,lmgA -,lmgB - chr2L_6_8525001 chr2L_8525001 RAL-531 201 chr2L 8594451 8594494 chr2L 8601525 8601568 297 11 7073 5.5 5.0 5.2 1.8 7117 chr2L 8594451 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598010 intron Sema-1a + chr2L 8601568 intron Sema-1a + chr2L_11_8595001 chr2L_8595001 RAL-531 202 chr2L 8604970 8605001 chr2L 8605078 8605109 5 114 1.0 4.0 2.5 1.4 139 chr2L 8604970 intron Sema-1a + chr2L 8605040 intron Sema-1a + chr2L 8605109 intron Sema-1a + chr2L_5_8605001 chr2L_8605001 RAL-531 203 chr2L 8612834 8612867 chr2L 8612931 8612964 8 95 2.5 7.5 5.0 1.3 130 chr2L 8612834 intron Sema-1a + chr2L 8612899 intron Sema-1a + chr2L 8612964 intron Sema-1a + chr2L_8_8610001 chr2L_8610001 RAL-531 204 chr2L 8687066 8687092 chr2L 8687190 8687211 4 123 5.0 3.0 4.0 0.8 145 chr2L 8687066 intergenic Trs23 +,Hnf4 - chr2L 8687138 intergenic Trs23 +,Hnf4 - chr2L 8687211 intergenic Hnf4 -,Trs23 + chr2L_4_8685001 chr2L_8685001 RAL-531 205 chr2L 8723096 8723144 chr2L 8731493 8731541 Tirant 10 8396 4.0 2.0 3.0 2.5 8445 chr2L 8723096 intron raw - chr2L 8727318 intron raw - chr2L 8731541 intron raw - chr2L_10_8725001 chr2L_8725001 RAL-531 206 chr2L 8736247 8736257 chr2L 8736347 8736356 5 100 0.5 4.0 2.2 1.6 109 chr2L 8736247 intron raw - chr2L 8736302 intron raw - chr2L 8736356 intron raw - chr2L_5_8735001 chr2L_8735001 RAL-531 207 chr2L 8789309 8789336 chr2L 8789382 8789414 6 72 2.5 4.5 3.5 1.3 105 chr2L 8789309 intergenic not near genes chr2L 8789362 intergenic not near genes chr2L 8789414 intergenic not near genes chr2L_6_8785001 chr2L_8785001 RAL-531 208 chr2L 8810790 8810799 chr2L 8810863 8810912 4 84 3.5 1.5 2.5 1.1 122 chr2L 8810790 intergenic not near genes chr2L 8810851 intergenic not near genes chr2L 8810912 intergenic not near genes chr2L_4_8810001 chr2L_8810001 RAL-531 209 chr2L 8956211 8956235 chr2L 8956308 8956326 7 96 6.5 2.0 4.2 1.3 115 chr2L 8956211 intron CG31886 - chr2L 8956268 intron CG31886 - chr2L 8956326 intron CG31886 - chr2L_7_8955001 chr2L_8955001 RAL-531 210 chr2L 8976204 8976242 chr2L 8976316 8976324 7 105 1.0 1.0 1.0 3.5 120 chr2L 8976204 intergenic not near genes chr2L 8976264 intergenic not near genes chr2L 8976324 intergenic not near genes chr2L_7_8975001 chr2L_8975001 RAL-531 211 chr2L 8980439 8980456 chr2L 8980548 8980565 7 109 7.0 0.0 3.5 1.6 126 chr2L 8980439 intron CG13101 - chr2L 8980502 intron CG13101 - chr2L 8980565 intron CG13101 - chr2L_7_8980001 chr2L_8980001 RAL-531 212 chr2L 9000261 9000305 chr2L 9007790 9007829 roo 18 7527 2.0 1.0 1.5 7.2 7568 chr2L 9000261 intergenic Try29F + chr2L 9004045 intergenic not near genes chr2L 9007829 intergenic not near genes chr2L_18_9000001 chr2L_9000001 RAL-531 213 chr2L 9007793 9007814 chr2L 9007892 9007895 8 95 1.0 0.5 0.8 4.4 102 chr2L 9007793 intergenic not near genes chr2L 9007844 intergenic not near genes chr2L 9007895 intergenic not near genes chr2L_8_9005001 chr2L_9005001 RAL-531 214 chr2L 9023139 9023188 chr2L 9023256 9023304 6 111 2.0 5.5 3.8 1.2 165 chr2L 9023139 intergenic not near genes chr2L 9023222 intergenic not near genes chr2L 9023304 intergenic not near genes chr2L_6_9020001 chr2L_9020001 RAL-531 215 chr2L 9040010 9040059 chr2L 9040117 9040166 14 106 2.0 1.5 1.8 5.0 156 chr2L 9040010 intergenic not near genes chr2L 9040088 intergenic not near genes chr2L 9040166 intergenic not near genes chr2L_14_9040001 chr2L_9040001 RAL-531 216 chr2L 9044093 9044108 chr2L 9044211 9044221 4 116 3.0 7.5 5.2 0.6 128 chr2L 9044093 intergenic not near genes chr2L 9044157 intergenic not near genes chr2L 9044221 intergenic not near genes chr2L_4_9040001 chr2L_9040001 RAL-531 217 chr2L 9053392 9053430 chr2L 9053647 9053685 12 254 1.0 0.5 0.8 6.7 293 chr2L 9053392 exon CG31708 - chr2L 9053538 intron CG31708 - chr2L 9053685 intron CG31708 - chr2L_12_9050001 chr2L_9050001 RAL-531 218 chr2L 9069664 9069672 chr2L 9069775 9069783 6 111 0.0 0.0 0.0 6.0 119 chr2L 9069664 intron CG31708 - chr2L 9069724 intron CG31708 - chr2L 9069783 intron CG31708 - chr2L_6_9065001 chr2L_9065001 RAL-531 219 chr2L 9113782 9113808 chr2L 9113912 9113938 9 130 4.5 1.5 3.0 2.2 156 chr2L 9113782 intergenic Or30a + chr2L 9113860 intergenic not near genes chr2L 9113938 intergenic not near genes chr2L_9_9110001 chr2L_9110001 RAL-531 220 chr2L 9227212 9227243 chr2L 9227312 9227346 5 102 2.5 3.5 3.0 1.2 134 chr2L 9227212 intron tai + chr2L 9227279 intron tai + chr2L 9227346 intron tai + chr2L_5_9225001 chr2L_9225001 RAL-531 221 chr2L 9297357 9297404 chr2L 9297454 9297497 19 94 3.0 1.5 2.2 5.9 140 chr2L 9297357 3` UTR Ggamma30A + chr2L 9297427 3` UTR Ggamma30A + chr2L 9297497 3` UTR Ggamma30A + chr2L_19_9295001 chr2L_9295001 RAL-531 222 chr2L 9303352 9303488 chr2L 9303475 9303584 14 114 0.0 0.0 0.0 14.0 232 chr2L 9303352 intergenic not near genes chr2L 9303468 intergenic not near genes chr2L 9303584 intergenic not near genes chr2L_14_9300001 chr2L_9300001 RAL-531 223 chr2L 9322805 9322833 chr2L 9322893 9322927 10 90 4.5 3.0 3.8 2.1 122 chr2L 9322805 intergenic not near genes chr2L 9322866 intergenic not near genes chr2L 9322927 intergenic not near genes chr2L_10_9320001 chr2L_9320001 RAL-531 224 chr2L 9352843 9352856 chr2L 9352945 9352949 6 98 4.5 3.0 3.8 1.2 106 chr2L 9352843 intergenic not near genes chr2L 9352896 intergenic not near genes chr2L 9352949 intergenic not near genes chr2L_6_9350001 chr2L_9350001 RAL-531 225 chr2L 9352862 9352884 chr2L 9352940 9352965 9 93 2.5 3.0 2.8 2.4 103 chr2L 9352862 intergenic not near genes chr2L 9352914 intergenic not near genes chr2L 9352965 intergenic not near genes chr2L_9_9350001 chr2L_9350001 RAL-531 226 chr2L 9387234 9387275 chr2L 9387352 9387393 12 116 4.5 5.5 5.0 2.0 159 chr2L 9387234 intron Shawl - chr2L 9387314 intron Shawl - chr2L 9387393 intron,5` UTR Shawl -,Aldh + chr2L_12_9385001 chr2L_9385001 RAL-531 227 chr2L 9393479 9393527 chr2L 9396466 9396514 jockey 14 2983 3.5 3.0 3.2 3.3 3035 chr2L 9393479 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396514 intron Shawl - chr2L_14_9390001 chr2L_9390001 RAL-531 228 chr2L 9451032 9451068 chr2L 9451155 9451182 6 116 0.0 4.0 2.0 2.0 150 chr2L 9451032 intron numb + chr2L 9451107 intron numb + chr2L 9451182 intron numb + chr2L_6_9450001 chr2L_9450001 RAL-531 229 chr2L 9454957 9455004 chr2L 9455079 9455123 7 121 6.5 1.0 3.8 1.5 166 chr2L 9454957 intron numb + chr2L 9455040 intron numb + chr2L 9455123 intron numb + chr2L_7_9455001 chr2L_9455001 RAL-531 230 chr2L 9456910 9456950 chr2L 9457011 9457045 6 100 2.0 1.5 1.8 2.1 135 chr2L 9456910 intron numb + chr2L 9456978 intron numb + chr2L 9457045 intron numb + chr2L_6_9455001 chr2L_9455001 RAL-531 231 chr2L 9474763 9474810 chr2L 9474876 9474922 17 113 0.0 2.5 1.2 7.7 159 chr2L 9474763 intergenic not near genes chr2L 9474842 intergenic not near genes chr2L 9474922 intergenic not near genes chr2L_17_9470001 chr2L_9470001 RAL-531 232 chr2L 9719755 9719769 chr2L 9719857 9719872 9 102 0.0 0.5 0.2 7.5 117 chr2L 9719755 intron Nckx30C - chr2L 9719814 intron Nckx30C - chr2L 9719872 intron Nckx30C - chr2L_9_9715001 chr2L_9715001 RAL-531 233 chr2L 9837432 9837439 chr2L 9837530 9837537 5 98 4.0 7.0 5.5 0.8 105 chr2L 9837432 intron nAChRalpha6 - chr2L 9837484 intron nAChRalpha6 - chr2L 9837537 intron nAChRalpha6 - chr2L_5_9835001 chr2L_9835001 RAL-531 234 chr2L 9837440 9837445 chr2L 9837513 9837543 5 87 3.5 7.0 5.2 0.8 103 chr2L 9837440 intron nAChRalpha6 - chr2L 9837492 intron nAChRalpha6 - chr2L 9837543 intron nAChRalpha6 - chr2L_5_9835001 chr2L_9835001 RAL-531 235 chr2L 9892494 9892534 chr2L 9892580 9892630 10 95 4.5 1.5 3.0 2.5 136 chr2L 9892494 intron mtDNA-helicase - chr2L 9892562 intron mtDNA-helicase - chr2L 9892630 intron mtDNA-helicase - chr2L_10_9890001 chr2L_9890001 RAL-531 236 chr2L 9973714 9973758 chr2L 9980844 9980897 HMS-Beagle 11 7129 2.0 1.5 1.8 3.9 7183 chr2L 9973714 intergenic not near genes chr2L 9977306 intergenic not near genes chr2L 9980897 intergenic not near genes chr2L_11_9975001 chr2L_9975001 RAL-531 237 chr2L 10023082 10023102 chr2L 10023159 10023192 10 91 2.5 2.5 2.5 2.9 110 chr2L 10023082 intergenic not near genes chr2L 10023137 intergenic not near genes chr2L 10023192 intergenic not near genes chr2L_10_10020001 chr2L_10020001 RAL-531 238 chr2L 10045406 10045437 chr2L 10045503 10045522 7 92 0.5 2.0 1.2 3.2 116 chr2L 10045406 intergenic not near genes chr2L 10045464 intergenic not near genes chr2L 10045522 intergenic not near genes chr2L_7_10045001 chr2L_10045001 RAL-531 239 chr2L 10131271 10131320 chr2L 10131382 10131412 20 108 4.0 1.0 2.5 5.7 141 chr2L 10131271 intron CG44153 - chr2L 10131342 intron CG44153 - chr2L 10131412 intron CG44153 - chr2L_20_10130001 chr2L_10130001 RAL-531 240 chr2L 10156337 10156353 chr2L 10163797 10163821 blood 4 7466 3.5 4.0 3.8 0.8 7484 chr2L 10156337 intron,3` UTR CG44153 -,CG4839 + chr2L 10160079 intron CG44153 - chr2L 10163821 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-531 241 chr2L 10209829 10209849 chr2L 10209926 10209946 6 97 8.0 0.0 4.0 1.2 117 chr2L 10209829 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209888 3` UTR CG5727 - chr2L 10209946 3` UTR CG5727 - chr2L_6_10205001 chr2L_10205001 RAL-531 242 chr2L 10232905 10232944 chr2L 10233017 10233052 16 111 5.0 5.5 5.2 2.6 147 chr2L 10232905 intron eEF1delta + chr2L 10232978 intron eEF1delta + chr2L 10233052 intron eEF1delta + chr2L_16_10230001 chr2L_10230001 RAL-531 243 chr2L 10258411 10258436 chr2L 10258516 10258541 9 105 2.5 3.0 2.8 2.4 130 chr2L 10258411 intron Pten - chr2L 10258476 intron Pten - chr2L 10258541 intron Pten - chr2L_9_10255001 chr2L_10255001 RAL-531 244 chr2L 10294167 10294192 chr2L 10294263 10294268 13 94 3.5 6.5 5.0 2.2 101 chr2L 10294167 intron Hand - chr2L 10294218 intron Hand - chr2L 10294268 intron Hand - chr2L_13_10290001 chr2L_10290001 RAL-531 245 chr2L 10344996 10345031 chr2L 10345137 10345152 7 137 3.5 6.0 4.8 1.2 156 chr2L 10344996 intron CG5022 + chr2L 10345074 intron CG5022 + chr2L 10345152 intron CG5022 + chr2L_7_10345001 chr2L_10345001 RAL-531 246 chr2L 10345033 10345048 chr2L 10345134 10345185 5 131 3.0 5.5 4.2 1.0 152 chr2L 10345033 intron CG5022 + chr2L 10345109 intron CG5022 + chr2L 10345185 intron CG5022 + chr2L_5_10345001 chr2L_10345001 RAL-531 247 chr2L 10495326 10495440 chr2L 10495423 10495534 10 93 0.5 0.0 0.2 8.3 208 chr2L 10495326 intron Myo31DF - chr2L 10495430 intron Myo31DF - chr2L 10495534 intron Myo31DF - chr2L_10_10495001 chr2L_10495001 RAL-531 248 chr2L 10515344 10515391 chr2L 10515457 10515504 18 113 6.0 4.0 5.0 3.0 160 chr2L 10515344 intron,intron CG45083 -,Fatp - chr2L 10515424 intron,intron CG45083 -,Fatp - chr2L 10515504 intron,intron CG45083 -,Fatp - chr2L_18_10515001 chr2L_10515001 RAL-531 249 chr2L 10531604 10531626 chr2L 10531711 10531727 7 110 0.0 7.0 3.5 1.6 123 chr2L 10531604 3` UTR Lip4 + chr2L 10531666 3` UTR Lip4 + chr2L 10531727 3` UTR Lip4 + chr2L_7_10530001 chr2L_10530001 RAL-531 250 chr2L 10554253 10554257 chr2L 10554357 10554366 4 108 1.0 0.0 0.5 2.7 113 chr2L 10554253 intron Trim9 + chr2L 10554310 intron Trim9 + chr2L 10554366 intron Trim9 + chr2L_4_10550001 chr2L_10550001 RAL-531 251 chr2L 10555257 10555289 chr2L 10555353 10555385 6 96 3.0 0.0 1.5 2.4 128 chr2L 10555257 intron Trim9 + chr2L 10555321 intron Trim9 + chr2L 10555385 intron Trim9 + chr2L_6_10555001 chr2L_10555001 RAL-531 252 chr2L 10563915 10563943 chr2L 10564010 10564011 4 80 2.5 4.5 3.5 0.9 96 chr2L 10563915 intron Trim9 + chr2L 10563963 intron Trim9 + chr2L 10564011 intron Trim9 + chr2L_4_10560001 chr2L_10560001 RAL-531 253 chr2L 10572693 10572735 chr2L 10572789 10572836 12 100 3.0 3.5 3.2 2.9 143 chr2L 10572693 intron Trim9 + chr2L 10572764 intron Trim9 + chr2L 10572836 intron Trim9 + chr2L_12_10570001 chr2L_10570001 RAL-531 254 chr2L 10592822 10592863 chr2L 10600503 10600543 opus 5 7681 1.5 5.0 3.2 1.2 7721 chr2L 10592822 intron Trim9 + chr2L 10596682 intron Trim9 + chr2L 10600543 intron Trim9 + chr2L_5_10595001 chr2L_10595001 RAL-531 255 chr2L 10604185 10604220 chr2L 10604280 10604322 5 100 2.5 5.0 3.8 1.0 137 chr2L 10604185 intron Trim9 + chr2L 10604254 intron Trim9 + chr2L 10604322 intron Trim9 + chr2L_5_10600001 chr2L_10600001 RAL-531 256 chr2L 10631190 10631222 chr2L 10631342 10631374 10 151 6.5 0.0 3.2 2.4 184 chr2L 10631190 intron CG7329 - chr2L 10631282 intron CG7329 - chr2L 10631374 intron CG7329 - chr2L_10_10630001 chr2L_10630001 RAL-531 257 chr2L 10634731 10634779 chr2L 10634831 10634879 12 99 4.0 2.0 3.0 3.0 148 chr2L 10634731 intron CG7329 - chr2L 10634805 intron CG7329 - chr2L 10634879 intron CG7329 - chr2L_12_10630001 chr2L_10630001 RAL-531 258 chr2L 10688521 10688559 chr2L 10688617 10688655 16 96 5.5 3.0 4.2 3.1 134 chr2L 10688521 intergenic CG7294 - chr2L 10688588 intergenic CG7294 - chr2L 10688655 intergenic CG7294 - chr2L_16_10685001 chr2L_10685001 RAL-531 259 chr2L 10723518 10723544 chr2L 10723632 10723648 11 112 6.0 4.0 5.0 1.8 130 chr2L 10723518 intergenic not near genes chr2L 10723583 intergenic not near genes chr2L 10723648 intergenic not near genes chr2L_11_10720001 chr2L_10720001 RAL-531 260 chr2L 10748273 10748312 chr2L 10748487 10748527 5 209 2.0 4.0 3.0 1.2 254 chr2L 10748273 intron CG17124 - chr2L 10748400 intron CG17124 - chr2L 10748527 intron CG17124 - chr2L_5_10745001 chr2L_10745001 RAL-531 261 chr2L 10836324 10836357 chr2L 10836425 10836456 13 101 3.0 4.0 3.5 2.9 132 chr2L 10836324 intron Nos - chr2L 10836390 intron Nos - chr2L 10836456 intron Nos - chr2L_13_10835001 chr2L_10835001 RAL-531 262 chr2L 10852153 10852176 chr2L 10852262 10852285 6 109 10.5 9.0 9.8 0.6 132 chr2L 10852153 intron CG43129 + chr2L 10852219 intron CG43129 + chr2L 10852285 intron CG43129 + chr2L_6_10850001 chr2L_10850001 RAL-531 263 chr2L 10862847 10862876 chr2L 10864452 10864479 Rt1c 6 1612 3.0 2.0 2.5 1.7 1632 chr2L 10862847 3` UTR CR43807 - chr2L 10863663 intron CR43807 - chr2L 10864479 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-531 264 chr2L 10905583 10905632 chr2L 10905689 10905739 9 105 0.0 3.0 1.5 3.6 156 chr2L 10905583 intergenic not near genes chr2L 10905661 intergenic not near genes chr2L 10905739 intergenic not near genes chr2L_9_10905001 chr2L_10905001 RAL-531 265 chr2L 10946946 10946977 chr2L 10956176 10956210 roo 7 9229 2.5 5.0 3.8 1.5 9264 chr2L 10946946 intron dpr2 - chr2L 10951578 intron dpr2 - chr2L 10956210 intron dpr2 - chr2L_7_10950001 chr2L_10950001 RAL-531 266 chr2L 10956956 10957001 chr2L 10957061 10957105 6 105 2.0 3.0 2.5 1.7 149 chr2L 10956956 intron dpr2 - chr2L 10957030 intron dpr2 - chr2L 10957105 intron dpr2 - chr2L_6_10955001 chr2L_10955001 RAL-531 267 chr2L 10961540 10961570 chr2L 10961747 10961774 4 203 0.0 3.5 1.8 1.4 234 chr2L 10961540 intron dpr2 - chr2L 10961657 intron dpr2 - chr2L 10961774 intron dpr2 - chr2L_4_10960001 chr2L_10960001 RAL-531 268 chr2L 11130483 11130523 chr2L 11130585 11130633 17 106 2.5 3.5 3.0 4.2 150 chr2L 11130483 5` UTR RfC38 - chr2L 11130558 5` UTR RfC38 - chr2L 11130633 5` UTR RfC38 - chr2L_17_11130001 chr2L_11130001 RAL-531 269 chr2L 11196462 11196504 chr2L 11196600 11196653 12 146 5.5 4.0 4.8 2.1 191 chr2L 11196462 intron Ca-beta - chr2L 11196558 intron Ca-beta - chr2L 11196653 intron Ca-beta - chr2L_12_11195001 chr2L_11195001 RAL-531 270 chr2L 11224035 11224091 chr2L 11224166 11224222 22 131 2.5 1.5 2.0 7.3 187 chr2L 11224035 intron ab + chr2L 11224128 intron ab + chr2L 11224222 intron ab + chr2L_22_11220001 chr2L_11220001 RAL-531 271 chr2L 11246742 11246776 chr2L 11246861 11246895 9 119 5.5 0.0 2.8 2.4 153 chr2L 11246742 intron ab + chr2L 11246818 intron ab + chr2L 11246895 intron ab + chr2L_9_11245001 chr2L_11245001 RAL-531 272 chr2L 11292363 11292408 chr2L 11292464 11292510 7 98 5.5 3.5 4.5 1.3 147 chr2L 11292363 intergenic not near genes chr2L 11292436 intergenic not near genes chr2L 11292510 intergenic not near genes chr2L_7_11290001 chr2L_11290001 RAL-531 273 chr2L 11357972 11358010 chr2L 11358070 11358108 9 97 4.5 5.5 5.0 1.5 136 chr2L 11357972 intergenic not near genes chr2L 11358040 intergenic not near genes chr2L 11358108 intergenic not near genes chr2L_9_11355001 chr2L_11355001 RAL-531 274 chr2L 11380604 11380640 chr2L 11380696 11380732 4 94 0.5 3.0 1.8 1.4 128 chr2L 11380604 intergenic not near genes chr2L 11380668 intergenic not near genes chr2L 11380732 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-531 275 chr2L 11397573 11397591 chr2L 11397703 11397721 5 128 5.0 0.0 2.5 1.4 148 chr2L 11397573 intergenic not near genes chr2L 11397647 intergenic not near genes chr2L 11397721 intergenic not near genes chr2L_5_11395001 chr2L_11395001 RAL-531 276 chr2L 11399515 11399535 chr2L 11399606 11399632 8 96 0.5 0.0 0.2 6.7 117 chr2L 11399515 intergenic not near genes chr2L 11399574 intergenic not near genes chr2L 11399632 intergenic not near genes chr2L_8_11395001 chr2L_11395001 RAL-531 277 chr2L 11450108 11450155 chr2L 11450213 11450221 10 100 0.0 0.5 0.2 8.3 113 chr2L 11450108 intergenic not near genes chr2L 11450164 intergenic not near genes chr2L 11450221 intergenic not near genes chr2L_10_11450001 chr2L_11450001 RAL-531 278 chr2L 11478661 11478711 chr2L 11478768 11478818 21 106 4.5 3.5 4.0 4.2 157 chr2L 11478661 intergenic not near genes chr2L 11478740 intergenic not near genes chr2L 11478818 intergenic not near genes chr2L_21_11475001 chr2L_11475001 RAL-531 279 chr2L 11496621 11496654 chr2L 11496712 11496752 11 95 1.5 0.5 1.0 5.5 131 chr2L 11496621 intergenic CG6488 - chr2L 11496686 intergenic CG6488 - chr2L 11496752 intergenic CG6488 - chr2L_11_11495001 chr2L_11495001 RAL-531 280 chr2L 11540562 11540611 chr2L 11547987 11548033 Tabor 6 7423 1.5 7.0 4.2 1.2 7471 chr2L 11540562 intergenic not near genes chr2L 11544298 intergenic not near genes chr2L 11548033 intergenic not near genes chr2L_6_11540001 chr2L_11540001 RAL-531 281 chr2L 11555391 11555424 chr2L 11555531 11555562 8 139 1.5 3.5 2.5 2.3 171 chr2L 11555391 intergenic not near genes chr2L 11555476 intergenic not near genes chr2L 11555562 intergenic not near genes chr2L_8_11555001 chr2L_11555001 RAL-531 282 chr2L 11596836 11596848 chr2L 11596936 11596947 4 100 2.0 3.0 2.5 1.1 111 chr2L 11596836 intron kek2 + chr2L 11596892 intron kek2 + chr2L 11596947 intron kek2 + chr2L_4_11595001 chr2L_11595001 RAL-531 283 chr2L 11665818 11665865 chr2L 11665916 11665953 11 94 0.0 3.5 1.8 3.9 135 chr2L 11665818 intergenic CR44481 + chr2L 11665886 intergenic CR44481 + chr2L 11665953 intergenic CR44481 + chr2L_11_11665001 chr2L_11665001 RAL-531 284 chr2L 11676310 11676349 chr2L 11676418 11676456 7 108 0.0 0.0 0.0 7.0 146 chr2L 11676310 intergenic not near genes chr2L 11676383 intergenic not near genes chr2L 11676456 intergenic not near genes chr2L_7_11675001 chr2L_11675001 RAL-531 285 chr2L 11713497 11713508 chr2L 11720984 11720994 blood 5 7485 5.5 3.0 4.2 1.0 7497 chr2L 11713497 intergenic not near genes chr2L 11717246 intergenic not near genes chr2L 11720994 intergenic CR44143 + chr2L_5_11715001 chr2L_11715001 RAL-531 286 chr2L 11713518 11713537 chr2L 11720976 11721025 blood 5 7476 3.0 3.0 3.0 1.2 7507 chr2L 11713518 intergenic not near genes chr2L 11717272 intergenic not near genes chr2L 11721025 intergenic CR44143 + chr2L_5_11715001 chr2L_11715001 RAL-531 287 chr2L 11765187 11765223 chr2L 11765399 11765436 5 211 4.0 3.0 3.5 1.1 249 chr2L 11765187 intergenic not near genes chr2L 11765312 intergenic not near genes chr2L 11765436 intergenic not near genes chr2L_5_11765001 chr2L_11765001 RAL-531 288 chr2L 11820426 11820460 chr2L 11820527 11820561 12 101 0.5 9.0 4.8 2.1 135 chr2L 11820426 intron Pde1c - chr2L 11820494 intron Pde1c - chr2L 11820561 intron Pde1c - chr2L_12_11820001 chr2L_11820001 RAL-531 289 chr2L 11841355 11841391 chr2L 11841446 11841489 8 96 5.5 1.5 3.5 1.8 134 chr2L 11841355 intron Pde1c - chr2L 11841422 intron Pde1c - chr2L 11841489 intron Pde1c - chr2L_8_11840001 chr2L_11840001 RAL-531 290 chr2L 11866987 11867007 chr2L 11867119 11867139 6 131 2.0 3.5 2.8 1.6 152 chr2L 11866987 intron Pde1c - chr2L 11867063 intron Pde1c - chr2L 11867139 intron Pde1c - chr2L_6_11865001 chr2L_11865001 RAL-531 291 chr2L 11934021 11934057 chr2L 11934638 11934680 6 618 2.5 2.5 2.5 1.7 659 chr2L 11934021 intergenic Or33a + chr2L 11934350 intergenic Or33a + chr2L 11934680 exon Or33a + chr2L_6_11930001 chr2L_11930001 RAL-531 292 chr2L 12067309 12067358 chr2L 12074381 12074430 297 21 7072 2.5 3.5 3.0 5.2 7121 chr2L 12067309 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074430 intergenic not near genes chr2L_21_12070001 chr2L_12070001 RAL-531 293 chr2L 12175796 12175847 chr2L 12175897 12175949 6 101 1.5 0.0 0.8 3.3 153 chr2L 12175796 intron,intron aret +,atilla - chr2L 12175872 intron,intron aret +,atilla - chr2L 12175949 intron,intron aret +,atilla - chr2L_6_12175001 chr2L_12175001 RAL-531 294 chr2L 12272142 12272195 chr2L 12272240 12272291 5 96 0.5 0.5 0.5 3.3 149 chr2L 12272142 intron aret + chr2L 12272216 intron aret + chr2L 12272291 intron aret + chr2L_5_12270001 chr2L_12270001 RAL-531 295 chr2L 12287805 12287819 chr2L 12287901 12287915 6 96 0.5 5.5 3.0 1.5 110 chr2L 12287805 intron aret + chr2L 12287860 intron aret + chr2L 12287915 intron aret + chr2L_6_12285001 chr2L_12285001 RAL-531 296 chr2L 12349612 12349663 chr2L 12349726 12349777 9 114 2.0 3.0 2.5 2.6 165 chr2L 12349612 intron bru-2 + chr2L 12349694 intron bru-2 + chr2L 12349777 intron bru-2 + chr2L_9_12345001 chr2L_12345001 RAL-531 297 chr2L 12385730 12385735 chr2L 12385819 12385833 4 96 0.5 0.0 0.2 3.3 103 chr2L 12385730 exon bru-2 + chr2L 12385782 intron bru-2 + chr2L 12385833 intron bru-2 + chr2L_4_12385001 chr2L_12385001 RAL-531 298 chr2L 12394977 12394998 chr2L 12395104 12395130 9 131 3.0 6.5 4.8 1.6 153 chr2L 12394977 intron bru-2 + chr2L 12395054 intron bru-2 + chr2L 12395130 intron bru-2 + chr2L_9_12395001 chr2L_12395001 RAL-531 299 chr2L 12480521 12480574 chr2L 12480618 12480671 24 96 3.0 2.5 2.8 6.3 150 chr2L 12480521 intron bun - chr2L 12480596 intron bun - chr2L 12480671 intron bun - chr2L_24_12480001 chr2L_12480001 RAL-531 300 chr2L 12507265 12507295 chr2L 12507373 12507405 7 108 4.5 0.5 2.5 2.0 140 chr2L 12507265 intron bun - chr2L 12507335 intron bun - chr2L 12507405 intron bun - chr2L_7_12505001 chr2L_12505001 RAL-531 301 chr2L 12529235 12529441 chr2L 12529377 12529528 16 126 0.0 0.0 0.0 16.0 293 chr2L 12529235 intron bun - chr2L 12529382 intron bun - chr2L 12529528 intron bun - chr2L_16_12525001 chr2L_12525001 RAL-531 302 chr2L 12558305 12558353 chr2L 12565454 12565498 HMS-Beagle 13 7148 2.5 4.5 3.5 2.9 7193 chr2L 12558305 intergenic not near genes chr2L 12561902 intergenic not near genes chr2L 12565498 intergenic not near genes chr2L_13_12560001 chr2L_12560001 RAL-531 303 chr2L 12653774 12653800 chr2L 12653911 12653937 8 135 8.0 2.0 5.0 1.3 163 chr2L 12653774 intergenic not near genes chr2L 12653856 intergenic not near genes chr2L 12653937 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-531 304 chr2L 12731043 12731088 chr2L 12735830 12735865 F-element 14 4785 4.5 5.0 4.8 2.4 4822 chr2L 12731043 intron MRP + chr2L 12733454 intron MRP + chr2L 12735865 intron MRP + chr2L_14_12730001 chr2L_12730001 RAL-531 305 chr2L 12736656 12736705 chr2L 12736751 12736760 11 88 3.0 4.5 3.8 2.3 104 chr2L 12736656 intron MRP + chr2L 12736708 intron MRP + chr2L 12736760 intron MRP + chr2L_11_12735001 chr2L_12735001 RAL-531 306 chr2L 12739155 12739195 chr2L 12743956 12743991 Doc 6 4800 1.5 5.5 3.5 1.3 4836 chr2L 12739155 exon MRP + chr2L 12741573 intron MRP + chr2L 12743991 exon MRP + chr2L_6_12740001 chr2L_12740001 RAL-531 307 chr2L 12751288 12751329 chr2L 12751391 12751415 9 99 0.5 0.5 0.5 6.0 127 chr2L 12751288 intergenic not near genes chr2L 12751352 intergenic not near genes chr2L 12751415 intergenic not near genes chr2L_9_12750001 chr2L_12750001 RAL-531 308 chr2L 12760228 12760255 chr2L 12760341 12760371 9 116 3.0 4.5 3.8 1.9 143 chr2L 12760228 intergenic CG15483 - chr2L 12760300 intergenic CG15483 - chr2L 12760371 3` UTR CG15483 - chr2L_9_12760001 chr2L_12760001 RAL-531 309 chr2L 12763806 12763869 chr2L 12764038 12764089 BS 8 226 0.0 0.0 0.0 8.0 283 chr2L 12763806 intergenic not near genes chr2L 12763948 intergenic not near genes chr2L 12764089 intergenic not near genes chr2L_8_12760001 chr2L_12760001 RAL-531 310 chr2L 12781783 12781813 chr2L 12789246 12789274 Quasimodo 13 7463 6.5 3.0 4.8 2.2 7491 chr2L 12781783 intergenic not near genes chr2L 12785528 intergenic not near genes chr2L 12789274 intergenic not near genes chr2L_13_12785001 chr2L_12785001 RAL-531 311 chr2L 12791594 12791600 chr2L 12795287 12795295 F-element 4 3694 5.5 9.0 7.2 0.5 3701 chr2L 12791594 intergenic not near genes chr2L 12793444 intergenic not near genes chr2L 12795295 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-531 312 chr2L 12791602 12791630 chr2L 12795282 12795325 F-element 12 3690 3.5 7.5 5.5 1.8 3723 chr2L 12791602 intergenic not near genes chr2L 12793464 intergenic not near genes chr2L 12795325 intergenic not near genes chr2L_12_12790001 chr2L_12790001 RAL-531 313 chr2L 12807418 12807460 chr2L 12807520 12807560 16 98 7.5 5.5 6.5 2.1 142 chr2L 12807418 intergenic CR43818 - chr2L 12807489 intergenic CR43818 - chr2L 12807560 intergenic CR43818 - chr2L_16_12805001 chr2L_12805001 RAL-531 314 chr2L 12835535 12835584 chr2L 12835664 12835713 15 127 1.5 4.5 3.0 3.8 178 chr2L 12835535 intergenic not near genes chr2L 12835624 intergenic not near genes chr2L 12835713 intergenic not near genes chr2L_15_12835001 chr2L_12835001 RAL-531 315 chr2L 12848415 12848447 chr2L 12848522 12848555 5 110 2.0 1.5 1.8 1.8 140 chr2L 12848415 intergenic not near genes chr2L 12848485 intergenic not near genes chr2L 12848555 intergenic not near genes chr2L_5_12845001 chr2L_12845001 RAL-531 316 chr2L 12861676 12861727 chr2L 12863163 12863197 hobo 9 1484 2.5 2.5 2.5 2.6 1521 chr2L 12861676 intergenic not near genes chr2L 12862436 intergenic not near genes chr2L 12863197 intergenic not near genes chr2L_9_12860001 chr2L_12860001 RAL-531 317 chr2L 12905462 12905507 chr2L 12905566 12905611 11 103 0.5 3.0 1.8 3.9 149 chr2L 12905462 intergenic not near genes chr2L 12905536 intergenic not near genes chr2L 12905611 intergenic not near genes chr2L_11_12905001 chr2L_12905001 RAL-531 318 chr2L 12933834 12933883 chr2L 12941321 12941370 blood 8 7486 2.5 3.5 3.0 2.0 7536 chr2L 12933834 intergenic not near genes chr2L 12937602 intergenic not near genes chr2L 12941370 intergenic not near genes chr2L_8_12935001 chr2L_12935001 RAL-531 319 chr2L 13230627 13230647 chr2L 13231019 13231026 6 388 5.5 3.5 4.5 1.1 399 chr2L 13230627 intergenic CG16815 + chr2L 13230826 intergenic CG16815 + chr2L 13231026 intergenic CG16815 + chr2L_6_13230001 chr2L_13230001 RAL-531 320 chr2L 13255267 13255294 chr2L 13255430 13255456 5 162 0.0 1.5 0.8 2.8 189 chr2L 13255267 intron CG31728 + chr2L 13255362 intron CG31728 + chr2L 13255456 exon CG31728 + chr2L_5_13255001 chr2L_13255001 RAL-531 321 chr2L 13266361 13266411 chr2L 13266469 13266472 8 91 3.0 5.5 4.2 1.5 111 chr2L 13266361 intron CG44085 + chr2L 13266416 intron CG44085 + chr2L 13266472 intron CG44085 + chr2L_8_13265001 chr2L_13265001 RAL-531 322 chr2L 13405633 13405676 chr2L 13410450 13410493 Doc 18 4816 3.0 4.5 3.8 3.8 4860 chr2L 13405633 exon CG7110 + chr2L 13408063 intron CG7110 + chr2L 13410493 intron CG7110 + chr2L_18_13405001 chr2L_13405001 RAL-531 323 chr2L 13422490 13422500 chr2L 13422553 13422579 6 90 0.0 6.0 3.0 1.5 89 chr2L 13422490 intron CG42784 + chr2L 13422534 intron CG42784 + chr2L 13422579 intron CG42784 + chr2L_6_13420001 chr2L_13420001 RAL-531 324 chr2L 13449446 13449495 chr2L 13456902 13456941 Quasimodo 11 7452 1.5 3.0 2.2 3.4 7495 chr2L 13449446 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453194 intron CG42784 + chr2L 13456941 intron CG42784 + chr2L_11_13450001 chr2L_13450001 RAL-531 325 chr2L 13481438 13481465 chr2L 13482065 13482087 jockey 5 625 7.0 5.5 6.2 0.7 649 chr2L 13481438 intron CG42784 + chr2L 13481762 intron CG42784 + chr2L 13482087 intron CG42784 + chr2L_5_13480001 chr2L_13480001 RAL-531 326 chr2L 13522116 13522155 chr2L 13527654 13527693 Transpac 10 5533 6.0 4.5 5.2 1.6 5577 chr2L 13522116 intron B4 - chr2L 13524904 intron B4 - chr2L 13527693 intron B4 - chr2L_10_13520001 chr2L_13520001 RAL-531 327 chr2L 13530719 13530771 chr2L 13531137 13531189 24 416 5.0 4.5 4.8 4.1 470 chr2L 13530719 intron,3` UTR B4 -,CG33642 + chr2L 13530954 intron B4 - chr2L 13531189 intron,exon B4 -,CG33643 + chr2L_24_13530001 chr2L_13530001 RAL-531 328 chr2L 13560381 13560419 chr2L 13565222 13565260 F-element 17 4840 6.5 3.5 5.0 2.8 4879 chr2L 13560381 intron kuz + chr2L 13562820 intron kuz + chr2L 13565260 intron kuz + chr2L_17_13560001 chr2L_13560001 RAL-531 329 chr2L 13572988 13573004 chr2L 13573178 13573183 5 187 8.0 4.0 6.0 0.7 195 chr2L 13572988 intron kuz + chr2L 13573086 intron kuz + chr2L 13573183 intron kuz + chr2L_5_13570001 chr2L_13570001 RAL-531 330 chr2L 13573009 13573034 chr2L 13573175 13573224 6 185 3.5 3.0 3.2 1.4 215 chr2L 13573009 intron kuz + chr2L 13573116 intron kuz + chr2L 13573224 intron kuz + chr2L_6_13570001 chr2L_13570001 RAL-531 331 chr2L 13573440 13573482 chr2L 13573550 13573588 7 95 1.0 3.0 2.0 2.3 148 chr2L 13573440 intron kuz + chr2L 13573514 intron kuz + chr2L 13573588 intron kuz + chr2L_7_13570001 chr2L_13570001 RAL-531 332 chr2L 13682452 13682486 chr2L 13683582 13683616 8 1131 10.5 12.0 11.2 0.7 1164 chr2L 13682452 intron CG31814 - chr2L 13683034 intron CG31814 - chr2L 13683616 intron CG31814 - chr2L_8_13680001 chr2L_13680001 RAL-531 333 chr2L 13682412 13682430 chr2L 13683589 13683632 10 1184 15.0 11.5 13.2 0.7 1220 chr2L 13682412 intron CG31814 - chr2L 13683022 intron CG31814 - chr2L 13683632 intron CG31814 - chr2L_10_13680001 chr2L_13680001 RAL-531 334 chr2L 13692992 13693031 chr2L 13693088 13693112 4 90 2.5 0.5 1.5 1.6 120 chr2L 13692992 intron CG31814 - chr2L 13693052 intron CG31814 - chr2L 13693112 intron CG31814 - chr2L_4_13690001 chr2L_13690001 RAL-531 335 chr2L 13704492 13704518 chr2L 13704997 13705025 4 506 0.0 6.0 3.0 1.0 533 chr2L 13704492 intron CG31814 - chr2L 13704758 intron CG31814 - chr2L 13705025 intron CG31814 - chr2L_4_13700001 chr2L_13700001 RAL-531 336 chr2L 13733758 13733787 chr2L 13733897 13733925 7 139 2.5 4.5 3.5 1.6 167 chr2L 13733758 intergenic not near genes chr2L 13733842 intergenic not near genes chr2L 13733925 intergenic not near genes chr2L_7_13730001 chr2L_13730001 RAL-531 337 chr2L 13761813 13761825 chr2L 13762916 13762950 Doc 6 1117 14.5 6.0 10.2 0.5 1137 chr2L 13761813 intron TM9SF4 + chr2L 13762382 intron TM9SF4 + chr2L 13762950 intron TM9SF4 + chr2L_6_13760001 chr2L_13760001 RAL-531 338 chr2L 13842110 13842163 chr2L 13842214 13842267 15 104 3.0 2.0 2.5 4.3 157 chr2L 13842110 intron CenG1A + chr2L 13842188 intron CenG1A + chr2L 13842267 intron CenG1A + chr2L_15_13840001 chr2L_13840001 RAL-531 339 chr2L 13853062 13853113 chr2L 13862232 13862277 roo 13 9165 5.0 2.5 3.8 2.7 9215 chr2L 13853062 intron CenG1A + chr2L 13857670 intron CenG1A + chr2L 13862277 intron CenG1A + chr2L_13_13855001 chr2L_13855001 RAL-531 340 chr2L 13913571 13913600 chr2L 13913704 13913733 11 133 11.0 4.5 7.8 1.2 162 chr2L 13913571 intergenic not near genes chr2L 13913652 intergenic not near genes chr2L 13913733 intergenic not near genes chr2L_11_13910001 chr2L_13910001 RAL-531 341 chr2L 13944410 13944428 chr2L 13944550 13944568 7 140 0.0 5.0 2.5 2.0 158 chr2L 13944410 intron Ance-3 + chr2L 13944489 intron Ance-3 + chr2L 13944568 intron Ance-3 + chr2L_7_13940001 chr2L_13940001 RAL-531 342 chr2L 13998919 13998958 chr2L 13999020 13999065 15 105 3.5 2.0 2.8 3.9 146 chr2L 13998919 intron rk - chr2L 13998992 intron rk - chr2L 13999065 intron rk - chr2L_15_13995001 chr2L_13995001 RAL-531 343 chr2L 14056795 14056837 chr2L 14056901 14056924 8 99 4.5 8.0 6.2 1.1 129 chr2L 14056795 intron nAChRalpha5 + chr2L 14056860 intron nAChRalpha5 + chr2L 14056924 intron nAChRalpha5 + chr2L_8_14055001 chr2L_14055001 RAL-531 344 chr2L 14096141 14096177 chr2L 14096251 14096261 4 102 4.5 0.0 2.2 1.2 120 chr2L 14096141 intergenic not near genes chr2L 14096201 intergenic not near genes chr2L 14096261 intergenic not near genes chr2L_4_14095001 chr2L_14095001 RAL-531 345 chr2L 14222283 14222295 chr2L 14222390 14222402 4 104 11.0 4.5 7.8 0.5 119 chr2L 14222283 intron Dyrk2 - chr2L 14222342 intron Dyrk2 - chr2L 14222402 intron Dyrk2 - chr2L_4_14220001 chr2L_14220001 RAL-531 346 chr2L 14222296 14222319 chr2L 14222388 14222409 4 99 6.0 4.5 5.2 0.6 113 chr2L 14222296 intron Dyrk2 - chr2L 14222352 intron Dyrk2 - chr2L 14222409 intron Dyrk2 - chr2L_4_14220001 chr2L_14220001 RAL-531 347 chr2L 14236228 14236269 chr2L 14236335 14236386 9 115 2.5 1.0 1.8 3.2 158 chr2L 14236228 5` UTR CR44728 + chr2L 14236307 5` UTR CR44728 + chr2L 14236386 intergenic CR44728 + chr2L_9_14235001 chr2L_14235001 RAL-531 348 chr2L 14271033 14271064 chr2L 14271128 14271161 5 96 3.0 2.0 2.5 1.4 128 chr2L 14271033 intron wb + chr2L 14271097 intron wb + chr2L 14271161 intron wb + chr2L_5_14270001 chr2L_14270001 RAL-531 349 chr2L 14296505 14296527 chr2L 14296581 14296600 4 83 3.0 1.0 2.0 1.3 95 chr2L 14296505 intron wb + chr2L 14296552 intron wb + chr2L 14296600 intron wb + chr2L_4_14295001 chr2L_14295001 RAL-531 350 chr2L 14298474 14298511 chr2L 14298572 14298609 5 98 5.0 0.0 2.5 1.4 135 chr2L 14298474 intron wb + chr2L 14298542 intron wb + chr2L 14298609 intron wb + chr2L_5_14295001 chr2L_14295001 RAL-531 351 chr2L 14333898 14333928 chr2L 14334013 14334048 10 119 3.5 2.0 2.8 2.6 150 chr2L 14333898 intergenic ms(2)34Fe +,CG33090 + chr2L 14333973 intergenic ms(2)34Fe +,CG33090 + chr2L 14334048 intergenic CG33090 +,ms(2)34Fe + chr2L_10_14330001 chr2L_14330001 RAL-531 352 chr2L 14384753 14384800 chr2L 14385034 14385067 8 278 6.0 4.5 5.2 1.3 314 chr2L 14384753 intergenic not near genes chr2L 14384910 intergenic not near genes chr2L 14385067 intergenic not near genes chr2L_8_14380001 chr2L_14380001 RAL-531 353 chr2L 14527027 14527055 chr2L 14527143 14527171 8 116 3.0 7.5 5.2 1.3 144 chr2L 14527027 intergenic not near genes chr2L 14527099 intergenic not near genes chr2L 14527171 intergenic not near genes chr2L_8_14525001 chr2L_14525001 RAL-531 354 chr2L 14555128 14555158 chr2L 14555227 14555257 7 99 4.0 8.0 6.0 1.0 129 chr2L 14555128 intergenic not near genes chr2L 14555192 intergenic not near genes chr2L 14555257 intergenic not near genes chr2L_7_14555001 chr2L_14555001 RAL-531 355 chr2L 14564699 14564727 chr2L 14565590 14565593 8 887 3.0 0.0 1.5 3.2 894 chr2L 14564699 intergenic not near genes chr2L 14565146 intergenic not near genes chr2L 14565593 intergenic not near genes chr2L_8_14565001 chr2L_14565001 RAL-531 356 chr2L 14588367 14588406 chr2L 14588541 14588580 14 174 4.5 4.0 4.2 2.7 213 chr2L 14588367 intergenic CG42680 - chr2L 14588474 intergenic CG42680 - chr2L 14588580 intergenic CG42680 - chr2L_14_14585001 chr2L_14585001 RAL-531 357 chr2L 14590190 14590216 chr2L 14590279 14590298 8 92 1.0 4.0 2.5 2.3 108 chr2L 14590190 intergenic not near genes chr2L 14590244 intergenic not near genes chr2L 14590298 intergenic not near genes chr2L_8_14590001 chr2L_14590001 RAL-531 358 chr2L 14715515 14715560 chr2L 14715626 14715671 13 109 7.0 6.0 6.5 1.7 156 chr2L 14715515 intergenic not near genes chr2L 14715593 intergenic not near genes chr2L 14715671 intergenic not near genes chr2L_13_14715001 chr2L_14715001 RAL-531 359 chr2L 14768916 14768938 chr2L 14769014 14769036 6 98 1.5 3.5 2.5 1.7 120 chr2L 14768916 intergenic not near genes chr2L 14768976 intergenic not near genes chr2L 14769036 intergenic not near genes chr2L_6_14765001 chr2L_14765001 RAL-531 360 chr2L 14769341 14769391 chr2L 14769520 14769569 20 179 3.5 4.5 4.0 4.0 228 chr2L 14769341 intergenic not near genes chr2L 14769455 intergenic not near genes chr2L 14769569 intergenic not near genes chr2L_20_14765001 chr2L_14765001 RAL-531 361 chr2L 14772690 14772718 chr2L 14772809 14772837 4 119 4.5 1.0 2.8 1.1 147 chr2L 14772690 intergenic not near genes chr2L 14772764 intergenic not near genes chr2L 14772837 intergenic not near genes chr2L_4_14770001 chr2L_14770001 RAL-531 362 chr2L 14803866 14803911 chr2L 14809080 14809091 copia 8 5208 3.5 5.5 4.5 1.5 5225 chr2L 14803866 intergenic not near genes chr2L 14806478 intergenic not near genes chr2L 14809091 intergenic not near genes chr2L_8_14805001 chr2L_14805001 RAL-531 363 chr2L 14833781 14833820 chr2L 14833905 14833942 14 120 3.5 3.0 3.2 3.3 161 chr2L 14833781 intergenic not near genes chr2L 14833862 intergenic not near genes chr2L 14833942 intergenic not near genes chr2L_14_14830001 chr2L_14830001 RAL-531 364 chr2L 14840981 14841010 chr2L 14841072 14841116 7 100 0.5 0.5 0.5 4.7 135 chr2L 14840981 3` UTR CR43805 - chr2L 14841048 3` UTR CR43805 - chr2L 14841116 3` UTR CR43805 - chr2L_7_14840001 chr2L_14840001 RAL-531 365 chr2L 14889934 14889976 chr2L 14890379 14890421 jockey 10 445 3.0 4.0 3.5 2.2 487 chr2L 14889934 intergenic not near genes chr2L 14890178 intergenic not near genes chr2L 14890421 intergenic not near genes chr2L_10_14890001 chr2L_14890001 RAL-531 366 chr2L 14933370 14933384 chr2L 14933467 14933482 5 98 4.5 4.5 4.5 0.9 112 chr2L 14933370 intron CG42313 - chr2L 14933426 intron CG42313 - chr2L 14933482 intron CG42313 - chr2L_5_14930001 chr2L_14930001 RAL-531 367 chr2L 14984371 14984404 chr2L 14991993 14992026 opus 7 7619 3.5 4.0 3.8 1.5 7655 chr2L 14984371 intron mol - chr2L 14988198 intron mol - chr2L 14992026 intron mol - chr2L_7_14985001 chr2L_14985001 RAL-531 368 chr2L 15021423 15021473 chr2L 15021519 15021569 13 95 2.5 3.5 3.0 3.2 146 chr2L 15021423 intron GABA-B-R1 + chr2L 15021496 intron GABA-B-R1 + chr2L 15021569 intron GABA-B-R1 + chr2L_13_15020001 chr2L_15020001 RAL-531 369 chr2L 15053122 15053134 chr2L 15053219 15053231 4 97 0.0 3.5 1.8 1.4 109 chr2L 15053122 intron ck - chr2L 15053176 intron ck - chr2L 15053231 intron ck - chr2L_4_15050001 chr2L_15050001 RAL-531 370 chr2L 15103843 15103865 chr2L 15103960 15103982 8 117 7.0 12.5 9.8 0.7 139 chr2L 15103843 intergenic not near genes chr2L 15103912 intergenic not near genes chr2L 15103982 intergenic not near genes chr2L_8_15100001 chr2L_15100001 RAL-531 371 chr2L 15122597 15122600 chr2L 15122688 15122693 4 95 0.0 6.0 3.0 1.0 96 chr2L 15122597 intergenic not near genes chr2L 15122645 intergenic not near genes chr2L 15122693 intergenic not near genes chr2L_4_15120001 chr2L_15120001 RAL-531 372 chr2L 15138754 15138801 chr2L 15138857 15138858 5 92 0.0 5.5 2.8 1.3 104 chr2L 15138754 intergenic not near genes chr2L 15138806 intergenic not near genes chr2L 15138858 intergenic not near genes chr2L_5_15135001 chr2L_15135001 RAL-531 373 chr2L 15161230 15161270 chr2L 15161386 15161418 11 153 4.5 0.5 2.5 3.1 188 chr2L 15161230 intergenic CR44770 + chr2L 15161324 intergenic CR44770 + chr2L 15161418 intergenic CR44770 +,CG4168 - chr2L_11_15160001 chr2L_15160001 RAL-531 374 chr2L 15244027 15244069 chr2L 15244160 15244202 9 133 1.5 5.0 3.2 2.1 175 chr2L 15244027 intron ZnT35C - chr2L 15244114 intron ZnT35C - chr2L 15244202 intron ZnT35C - chr2L_9_15240001 chr2L_15240001 RAL-531 375 chr2L 15446029 15446083 chr2L 15453518 15453562 blood 19 7487 3.5 5.5 4.5 3.5 7533 chr2L 15446029 intergenic not near genes chr2L 15449796 intergenic not near genes chr2L 15453562 intergenic not near genes chr2L_19_15445001 chr2L_15445001 RAL-531 376 chr2L 15527411 15527457 chr2L 15527509 15527556 7 97 0.0 1.5 0.8 3.9 145 chr2L 15527411 intergenic not near genes chr2L 15527484 intergenic not near genes chr2L 15527556 intergenic not near genes chr2L_7_15525001 chr2L_15525001 RAL-531 377 chr2L 15586392 15586442 chr2L 15593464 15593506 297 12 7071 2.5 4.0 3.2 2.9 7114 chr2L 15586392 intergenic not near genes chr2L 15589949 intergenic not near genes chr2L 15593506 intergenic not near genes chr2L_12_15585001 chr2L_15585001 RAL-531 378 chr2L 15598741 15598786 chr2L 15598847 15598892 11 105 5.0 3.0 4.0 2.2 151 chr2L 15598741 intergenic not near genes chr2L 15598816 intergenic not near genes chr2L 15598892 intergenic not near genes chr2L_11_15595001 chr2L_15595001 RAL-531 379 chr2L 15628392 15628411 chr2L 15628488 15628507 7 95 0.0 2.5 1.2 3.2 115 chr2L 15628392 intergenic CG7631 + chr2L 15628450 intergenic CG7631 + chr2L 15628507 intergenic CG7631 + chr2L_7_15625001 chr2L_15625001 RAL-531 380 chr2L 15823331 15823368 chr2L 15823427 15823464 9 96 4.5 4.0 4.2 1.7 133 chr2L 15823331 intergenic CR44601 - chr2L 15823398 intergenic CR44601 - chr2L 15823464 intergenic not near genes chr2L_9_15820001 chr2L_15820001 RAL-531 381 chr2L 15826878 15826892 chr2L 15829292 15829306 Tabor 5 2414 4.0 10.5 7.2 0.6 2428 chr2L 15826878 intergenic not near genes chr2L 15828092 intergenic not near genes chr2L 15829306 intergenic not near genes chr2L_5_15825001 chr2L_15825001 RAL-531 382 chr2L 15954164 15954210 chr2L 15954263 15954311 8 99 4.5 7.5 6.0 1.1 147 chr2L 15954164 intron beat-Ib - chr2L 15954238 intron beat-Ib - chr2L 15954311 intron beat-Ib - chr2L_8_15950001 chr2L_15950001 RAL-531 383 chr2L 15956019 15956050 chr2L 15957493 15957533 hobo 11 1484 6.5 4.5 5.5 1.7 1514 chr2L 15956019 intron beat-Ib - chr2L 15956776 intron beat-Ib - chr2L 15957533 intron beat-Ib - chr2L_11_15955001 chr2L_15955001 RAL-531 384 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 7 145889 11.5 16.5 14.0 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-531 385 chr2L 16123463 16123523 chr2L 16123565 16123621 12 100 4.0 1.0 2.5 3.4 158 chr2L 16123463 intergenic not near genes chr2L 16123542 intergenic not near genes chr2L 16123621 intergenic not near genes chr2L_12_16120001 chr2L_16120001 RAL-531 386 chr2L 16141148 16141194 chr2L 16146389 16146421 copia 16 5227 0.0 8.0 4.0 3.2 5273 chr2L 16141148 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146421 intergenic not near genes chr2L_16_16140001 chr2L_16140001 RAL-531 387 chr2L 16147174 16147211 chr2L 16147265 16147294 6 91 0.0 3.0 1.5 2.4 120 chr2L 16147174 intergenic not near genes chr2L 16147234 intergenic not near genes chr2L 16147294 intergenic not near genes chr2L_6_16145001 chr2L_16145001 RAL-531 388 chr2L 16147268 16147322 chr2L 16147674 16147728 12 405 2.0 2.0 2.0 4.0 460 chr2L 16147268 intergenic not near genes chr2L 16147498 intergenic not near genes chr2L 16147728 intergenic not near genes chr2L_12_16145001 chr2L_16145001 RAL-531 389 chr2L 16153731 16153760 chr2L 16160819 16160848 297 7 7087 0.5 3.0 1.8 2.5 7117 chr2L 16153731 intergenic not near genes chr2L 16157290 intergenic not near genes chr2L 16160848 intergenic not near genes chr2L_7_16155001 chr2L_16155001 RAL-531 390 chr2L 16197181 16197226 chr2L 16197277 16197324 9 99 3.5 5.5 4.5 1.6 143 chr2L 16197181 intergenic not near genes chr2L 16197252 intergenic not near genes chr2L 16197324 intergenic not near genes chr2L_9_16195001 chr2L_16195001 RAL-531 391 chr2L 16226171 16226206 chr2L 16226273 16226312 13 106 2.5 2.5 2.5 3.7 141 chr2L 16226171 intergenic not near genes chr2L 16226242 intergenic not near genes chr2L 16226312 intergenic not near genes chr2L_13_16225001 chr2L_16225001 RAL-531 392 chr2L 16226207 16226212 chr2L 16226271 16226319 5 98 2.5 2.5 2.5 1.4 112 chr2L 16226207 intergenic not near genes chr2L 16226263 intergenic not near genes chr2L 16226319 intergenic not near genes chr2L_5_16225001 chr2L_16225001 RAL-531 393 chr2L 16232436 16232474 chr2L 16232528 16232530 7 86 0.5 1.0 0.8 3.9 94 chr2L 16232436 intron CG42817 + chr2L 16232483 intron CG42817 + chr2L 16232530 intron CG42817 + chr2L_7_16230001 chr2L_16230001 RAL-531 394 chr2L 16243220 16243373 chr2L 16243317 16243452 18 97 2.0 4.0 3.0 4.5 232 chr2L 16243220 exon CG42818 + chr2L 16243336 exon CG42818 + chr2L 16243452 exon CG42818 + chr2L_18_16240001 chr2L_16240001 RAL-531 395 chr2L 16270378 16270381 chr2L 16270467 16270480 4 97 4.0 6.5 5.2 0.6 102 chr2L 16270378 intron crp - chr2L 16270429 intron crp - chr2L 16270480 intron crp - chr2L_4_16270001 chr2L_16270001 RAL-531 396 chr2L 16270382 16270416 chr2L 16270462 16270516 5 92 3.5 6.5 5.0 0.8 134 chr2L 16270382 intron crp - chr2L 16270449 intron crp - chr2L 16270516 intron crp - chr2L_5_16270001 chr2L_16270001 RAL-531 397 chr2L 16354758 16354786 chr2L 16354870 16354898 6 111 5.0 1.0 3.0 1.5 140 chr2L 16354758 intergenic CaBP1 -,CG4455 + chr2L 16354828 intergenic CaBP1 -,CG4455 + chr2L 16354898 3` UTR CaBP1 - chr2L_6_16350001 chr2L_16350001 RAL-531 398 chr2L 16363924 16363965 chr2L 16364190 16364231 11 265 0.5 3.5 2.0 3.7 307 chr2L 16363924 intergenic not near genes chr2L 16364078 intergenic not near genes chr2L 16364231 intergenic not near genes chr2L_11_16360001 chr2L_16360001 RAL-531 399 chr2L 16365454 16365500 chr2L 16365624 16365659 8 166 0.0 3.5 1.8 2.9 205 chr2L 16365454 intergenic jhamt + chr2L 16365556 intergenic jhamt + chr2L 16365659 intergenic jhamt + chr2L_8_16365001 chr2L_16365001 RAL-531 400 chr2L 16434088 16434127 chr2L 16434190 16434229 6 102 3.5 2.0 2.8 1.6 141 chr2L 16434088 intron CG5888 - chr2L 16434158 intron CG5888 - chr2L 16434229 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-531 401 chr2L 16447789 16447838 chr2L 16447888 16447937 13 98 3.0 7.0 5.0 2.2 148 chr2L 16447789 intron,intron CG5888 -,Idgf2 + chr2L 16447863 intron,intron CG5888 -,Idgf2 + chr2L 16447937 intron,intron CG5888 -,Idgf2 + chr2L_13_16445001 chr2L_16445001 RAL-531 402 chr2L 16504990 16505013 chr2L 16505120 16505143 4 130 0.0 7.5 3.8 0.8 153 chr2L 16504990 intron Tpr2 + chr2L 16505066 intron Tpr2 + chr2L 16505143 intron Tpr2 + chr2L_4_16505001 chr2L_16505001 RAL-531 403 chr2L 16507953 16507966 chr2L 16508061 16508074 6 108 0.0 12.5 6.2 0.8 121 chr2L 16507953 intergenic CG5953 -,Tpr2 + chr2L 16508014 intergenic CG5953 -,Tpr2 + chr2L 16508074 intergenic CG5953 -,Tpr2 + chr2L_6_16505001 chr2L_16505001 RAL-531 404 chr2L 16511943 16511993 chr2L 16519077 16519127 HMS-Beagle 10 7133 4.5 2.0 3.2 2.4 7184 chr2L 16511943 intron CG5953 - chr2L 16515535 intron CG5953 - chr2L 16519127 intron CG5953 - chr2L_10_16515001 chr2L_16515001 RAL-531 405 chr2L 16550661 16550680 chr2L 16550737 16550769 7 92 3.0 6.5 4.8 1.2 108 chr2L 16550661 intron CG42389 + chr2L 16550715 intron CG42389 + chr2L 16550769 intron CG42389 + chr2L_7_16550001 chr2L_16550001 RAL-531 406 chr2L 16565863 16565869 chr2L 16565985 16565991 8 122 9.5 6.0 7.8 0.9 128 chr2L 16565863 intron CG42389 + chr2L 16565927 intron CG42389 + chr2L 16565991 intron CG42389 + chr2L_8_16565001 chr2L_16565001 RAL-531 407 chr2L 16565871 16565900 chr2L 16565978 16566022 16 121 4.5 5.5 5.0 2.7 151 chr2L 16565871 intron CG42389 + chr2L 16565946 intron CG42389 + chr2L 16566022 intron CG42389 + chr2L_16_16565001 chr2L_16565001 RAL-531 408 chr2L 16595689 16595735 chr2L 16596033 16596078 17 342 8.5 2.5 5.5 2.6 389 chr2L 16595689 intron CG42389 + chr2L 16595884 intron CG42389 + chr2L 16596078 intron CG42389 + chr2L_17_16595001 chr2L_16595001 RAL-531 409 chr2L 16600235 16600260 chr2L 16600350 16600360 9 111 4.0 7.0 5.5 1.4 125 chr2L 16600235 intron CG42389 + chr2L 16600298 intron CG42389 + chr2L 16600360 intron CG42389 + chr2L_9_16600001 chr2L_16600001 RAL-531 410 chr2L 16764950 16764999 chr2L 16765050 16765099 21 99 4.5 1.5 3.0 5.2 149 chr2L 16764950 intergenic not near genes chr2L 16765024 intergenic not near genes chr2L 16765099 intergenic not near genes chr2L_21_16765001 chr2L_16765001 RAL-531 411 chr2L 16809629 16809654 chr2L 16809777 16809802 7 148 0.0 0.0 0.0 7.0 173 chr2L 16809629 intron,intron CG13280 -,CG13272 + chr2L 16809716 intron,intron CG13280 -,CG13272 + chr2L 16809802 intron,intron CG13280 -,CG13272 + chr2L_7_16805001 chr2L_16805001 RAL-531 412 chr2L 16840994 16841002 chr2L 16841090 16841094 4 95 9.0 5.0 7.0 0.5 100 chr2L 16840994 intron,intron SclA +,SclB + chr2L 16841044 intron,intron SclA +,SclB + chr2L 16841094 intron,intron SclA +,SclB + chr2L_4_16840001 chr2L_16840001 RAL-531 413 chr2L 16841004 16841045 chr2L 16841089 16841141 10 92 3.5 5.0 4.2 1.9 137 chr2L 16841004 intron,intron SclA +,SclB + chr2L 16841072 intron,intron SclA +,SclB + chr2L 16841141 intron,intron SclA +,SclB + chr2L_10_16840001 chr2L_16840001 RAL-531 414 chr2L 16852792 16852806 chr2L 16859945 16859968 Doc4-element 9 7159 12.0 8.5 10.2 0.8 7176 chr2L 16852792 intergenic CG31810 - chr2L 16856380 intron CG31809 - chr2L 16859968 intergenic CG6012 - chr2L_9_16855001 chr2L_16855001 RAL-531 415 chr2L 16952670 16952716 chr2L 16952799 16952842 7 128 1.0 2.0 1.5 2.8 172 chr2L 16952670 intergenic not near genes chr2L 16952756 intergenic not near genes chr2L 16952842 intergenic not near genes chr2L_7_16950001 chr2L_16950001 RAL-531 416 chr2L 16958091 16958128 chr2L 16962899 16962935 Doc 6 4808 5.5 6.5 6.0 0.9 4844 chr2L 16958091 intergenic not near genes chr2L 16960513 intergenic not near genes chr2L 16962935 intergenic not near genes chr2L_6_16960001 chr2L_16960001 RAL-531 417 chr2L 17000116 17000152 chr2L 17000246 17000294 6 137 0.5 3.0 1.8 2.1 178 chr2L 17000116 intergenic not near genes chr2L 17000205 intergenic not near genes chr2L 17000294 intergenic not near genes chr2L_6_17000001 chr2L_17000001 RAL-531 418 chr2L 17032490 17032522 chr2L 17032595 17032627 8 105 3.0 2.5 2.8 2.1 137 chr2L 17032490 intergenic not near genes chr2L 17032558 intergenic not near genes chr2L 17032627 intergenic not near genes chr2L_8_17030001 chr2L_17030001 RAL-531 419 chr2L 17118699 17118712 chr2L 17118776 17118819 6 102 0.0 1.5 0.8 3.3 120 chr2L 17118699 intergenic not near genes chr2L 17118759 intergenic not near genes chr2L 17118819 intergenic not near genes chr2L_6_17115001 chr2L_17115001 RAL-531 420 chr2L 17122767 17122808 chr2L 17122863 17122913 16 95 1.0 2.5 1.8 5.7 146 chr2L 17122767 intergenic not near genes chr2L 17122840 intergenic CG31784 - chr2L 17122913 intergenic CG31784 - chr2L_16_17120001 chr2L_17120001 RAL-531 421 chr2L 17167550 17167586 chr2L 17167806 17167847 pogo 9 260 4.0 3.5 3.8 1.9 297 chr2L 17167550 intron,intron CG34106 +,beat-IIIa + chr2L 17167698 intron,intron CG34106 +,beat-IIIa + chr2L 17167847 intron,intron CG34106 +,beat-IIIa + chr2L_9_17165001 chr2L_17165001 RAL-531 422 chr2L 17199149 17199185 chr2L 17200634 17200672 hobo 16 1486 4.0 4.5 4.2 3.1 1523 chr2L 17199149 intron beat-IIIc - chr2L 17199910 intron beat-IIIc - chr2L 17200672 intron beat-IIIc - chr2L_16_17195001 chr2L_17195001 RAL-531 423 chr2L 17226088 17226127 chr2L 17226187 17226223 17 98 5.5 4.5 5.0 2.8 135 chr2L 17226088 intron beat-IIIc - chr2L 17226156 intron beat-IIIc - chr2L 17226223 intron beat-IIIc - chr2L_17_17225001 chr2L_17225001 RAL-531 424 chr2L 17264743 17264773 chr2L 17264843 17264873 13 100 2.0 8.0 5.0 2.2 130 chr2L 17264743 intergenic not near genes chr2L 17264808 intergenic not near genes chr2L 17264873 intergenic not near genes chr2L_13_17260001 chr2L_17260001 RAL-531 425 chr2L 17273200 17273230 chr2L 17278003 17278016 F-element 4 4798 2.0 5.0 3.5 0.9 4816 chr2L 17273200 intergenic not near genes chr2L 17275608 intergenic not near genes chr2L 17278016 intergenic not near genes chr2L_4_17275001 chr2L_17275001 RAL-531 426 chr2L 17294260 17294286 chr2L 17294556 17294578 4 291 7.5 7.0 7.2 0.5 318 chr2L 17294260 intergenic not near genes chr2L 17294419 intergenic not near genes chr2L 17294578 intergenic not near genes chr2L_4_17290001 chr2L_17290001 RAL-531 427 chr2L 17327897 17327925 chr2L 17328001 17328030 5 105 7.5 5.5 6.5 0.7 133 chr2L 17327897 intergenic not near genes chr2L 17327964 intergenic not near genes chr2L 17328030 intergenic not near genes chr2L_5_17325001 chr2L_17325001 RAL-531 428 chr2L 17360006 17360038 chr2L 17360204 17360236 10 197 4.5 0.0 2.2 3.1 230 chr2L 17360006 intergenic not near genes chr2L 17360121 intergenic not near genes chr2L 17360236 intergenic not near genes chr2L_10_17360001 chr2L_17360001 RAL-531 429 chr2L 17432008 17432039 chr2L 17432133 17432166 1360 12 126 0.0 6.0 3.0 3.0 158 chr2L 17432008 intron Dif - chr2L 17432087 intron Dif - chr2L 17432166 intron Dif - chr2L_12_17430001 chr2L_17430001 RAL-531 430 chr2L 17460840 17460888 chr2L 17460936 17460985 21 97 5.5 5.0 5.2 3.4 145 chr2L 17460840 3` UTR BicD - chr2L 17460912 3` UTR BicD - chr2L 17460985 3` UTR BicD - chr2L_21_17460001 chr2L_17460001 RAL-531 431 chr2L 17564134 17564184 chr2L 17564238 17564272 9 103 3.0 4.0 3.5 2.0 138 chr2L 17564134 intergenic not near genes chr2L 17564203 intergenic not near genes chr2L 17564272 intergenic not near genes chr2L_9_17560001 chr2L_17560001 RAL-531 432 chr2L 17579862 17579918 chr2L 17579960 17579999 20 96 2.0 2.5 2.2 6.2 137 chr2L 17579862 5` UTR CR45698 + chr2L 17579930 5` UTR CR45698 + chr2L 17579999 5` UTR CR45698 + chr2L_20_17575001 chr2L_17575001 RAL-531 433 chr2L 17589885 17589933 chr2L 17589983 17590030 14 96 2.5 3.0 2.8 3.7 145 chr2L 17589885 intron Oli + chr2L 17589958 intron Oli + chr2L 17590030 intron Oli + chr2L_14_17585001 chr2L_17585001 RAL-531 434 chr2L 17680476 17680496 chr2L 17680641 17680661 7 165 7.0 4.0 5.5 1.1 185 chr2L 17680476 intron CadN - chr2L 17680568 intron CadN - chr2L 17680661 intron CadN - chr2L_7_17680001 chr2L_17680001 RAL-531 435 chr2L 17723771 17723787 chr2L 17723884 17723900 7 112 5.5 3.0 4.2 1.3 129 chr2L 17723771 intron CadN - chr2L 17723836 intron CadN - chr2L 17723900 intron CadN - chr2L_7_17720001 chr2L_17720001 RAL-531 436 chr2L 17769432 17769465 chr2L 17769530 17769583 8 110 2.5 4.0 3.2 1.9 151 chr2L 17769432 intron CadN - chr2L 17769508 intron CadN - chr2L 17769583 intron CadN - chr2L_8_17765001 chr2L_17765001 RAL-531 437 chr2L 17790195 17790240 chr2L 17790298 17790343 16 103 2.5 2.0 2.2 5.0 148 chr2L 17790195 intron CadN2 - chr2L 17790269 intron CadN2 - chr2L 17790343 intron CadN2 - chr2L_16_17790001 chr2L_17790001 RAL-531 438 chr2L 17796551 17796578 chr2L 17796645 17796675 9 99 2.0 3.5 2.8 2.4 124 chr2L 17796551 intron CadN2 - chr2L 17796613 intron CadN2 - chr2L 17796675 intron CadN2 - chr2L_9_17795001 chr2L_17795001 RAL-531 439 chr2L 17819904 17819945 chr2L 17825127 17825168 copia 12 5223 5.5 1.0 3.2 2.9 5264 chr2L 17819904 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825168 intron CadN2 - chr2L_12_17820001 chr2L_17820001 RAL-531 440 chr2L 17855481 17855529 chr2L 17855573 17855627 15 95 6.0 5.5 5.8 2.2 146 chr2L 17855481 intron CadN2 - chr2L 17855554 intron CadN2 - chr2L 17855627 intron CadN2 - chr2L_15_17855001 chr2L_17855001 RAL-531 441 chr2L 17859324 17859358 chr2L 17859725 17859764 8 400 1.5 2.5 2.0 2.7 440 chr2L 17859324 intron CadN2 - chr2L 17859544 intron CadN2 - chr2L 17859764 intron CadN2 - chr2L_8_17855001 chr2L_17855001 RAL-531 442 chr2L 17911943 17911978 chr2L 17914149 17914184 pogo 9 2203 3.5 5.0 4.2 1.7 2241 chr2L 17911943 intergenic not near genes chr2L 17913064 intergenic not near genes chr2L 17914184 intergenic CG43271 - chr2L_9_17910001 chr2L_17910001 RAL-531 443 chr2L 17951920 17951978 chr2L 17953410 17953465 hobo 15 1488 2.5 1.0 1.8 5.4 1545 chr2L 17951920 intergenic CR44398 -,CR44397 - chr2L 17952692 intergenic not near genes chr2L 17953465 intergenic not near genes chr2L_15_17950001 chr2L_17950001 RAL-531 444 chr2L 18051881 18051904 chr2L 18061020 18061071 roo 7 9149 2.0 3.5 2.8 1.8 9190 chr2L 18051881 intron rdo + chr2L 18056476 intron rdo + chr2L 18061071 intron rdo + chr2L_7_18055001 chr2L_18055001 RAL-531 445 chr2L 18111221 18111260 chr2L 18111332 18111353 11 103 4.5 4.5 4.5 2.0 132 chr2L 18111221 intergenic not near genes chr2L 18111287 intergenic not near genes chr2L 18111353 intergenic not near genes chr2L_11_18110001 chr2L_18110001 RAL-531 446 chr2L 18185013 18185021 chr2L 18185148 18185156 4 135 3.5 10.0 6.8 0.5 143 chr2L 18185013 intron CG42750 - chr2L 18185084 intron CG42750 - chr2L 18185156 intron CG42750 - chr2L_4_18185001 chr2L_18185001 RAL-531 447 chr2L 18216277 18216319 chr2L 18216374 18216416 17 93 5.0 3.5 4.2 3.3 139 chr2L 18216277 intron CG42750 - chr2L 18216346 intron CG42750 - chr2L 18216416 intron CG42750 - chr2L_17_18215001 chr2L_18215001 RAL-531 448 chr2L 18263076 18263121 chr2L 18263191 18263191 13 110 2.5 4.5 3.5 2.9 115 chr2L 18263076 intron CG42750 - chr2L 18263134 intron CG42750 - chr2L 18263191 intron CG42750 - chr2L_13_18260001 chr2L_18260001 RAL-531 449 chr2L 18408011 18408053 chr2L 18412814 18412838 Doc 13 4798 5.5 0.0 2.8 3.4 4827 chr2L 18408011 intergenic not near genes chr2L 18410424 intergenic not near genes chr2L 18412838 intergenic not near genes chr2L_13_18410001 chr2L_18410001 RAL-531 450 chr2L 18418881 18418922 chr2L 18418982 18419024 16 100 1.5 2.5 2.0 5.3 143 chr2L 18418881 intergenic not near genes chr2L 18418952 intergenic not near genes chr2L 18419024 intergenic not near genes chr2L_16_18415001 chr2L_18415001 RAL-531 451 chr2L 18423836 18423870 chr2L 18423947 18423981 18 110 4.0 8.5 6.2 2.5 145 chr2L 18423836 intergenic not near genes chr2L 18423908 intergenic not near genes chr2L 18423981 intergenic not near genes chr2L_18_18420001 chr2L_18420001 RAL-531 452 chr2L 18555628 18555658 chr2L 18555735 18555745 8 103 8.5 1.5 5.0 1.3 117 chr2L 18555628 intron Pde11 - chr2L 18555686 intron Pde11 - chr2L 18555745 intron Pde11 - chr2L_8_18555001 chr2L_18555001 RAL-531 453 chr2L 18571547 18571581 chr2L 18571752 18571770 7 211 5.0 8.0 6.5 0.9 223 chr2L 18571547 intron Pde11 - chr2L 18571658 intron Pde11 - chr2L 18571770 intron Pde11 - chr2L_7_18570001 chr2L_18570001 RAL-531 454 chr2L 18571231 18571283 chr2L 18579295 18579347 13 8069 35.5 22.5 29.0 0.4 8116 chr2L 18571231 intron Pde11 - chr2L 18575289 intron Pde11 - chr2L 18579347 intron Pde11 - chr2L_13_18575001 chr2L_18575001 RAL-531 455 chr2L 18737063 18737089 chr2L 18737204 18737230 6 141 5.5 5.0 5.2 1.0 167 chr2L 18737063 intergenic not near genes chr2L 18737146 intergenic not near genes chr2L 18737230 intergenic not near genes chr2L_6_18735001 chr2L_18735001 RAL-531 456 chr2L 18812539 18812580 chr2L 18812822 18812860 8 280 3.0 4.0 3.5 1.8 321 chr2L 18812539 intergenic CG17325 +,CG42305 + chr2L 18812700 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812860 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_8_18810001 chr2L_18810001 RAL-531 457 chr2L 18898381 18898423 chr2L 18898483 18898525 13 100 1.0 0.5 0.8 7.2 144 chr2L 18898381 intergenic not near genes chr2L 18898453 intergenic not near genes chr2L 18898525 intergenic not near genes chr2L_13_18895001 chr2L_18895001 RAL-531 458 chr2L 18902610 18902646 chr2L 18902911 18902926 14 297 6.0 7.5 6.8 1.8 316 chr2L 18902610 intergenic not near genes chr2L 18902768 intergenic not near genes chr2L 18902926 intergenic not near genes chr2L_14_18900001 chr2L_18900001 RAL-531 459 chr2L 18926569 18926592 chr2L 18926696 18926719 7 127 1.5 4.5 3.0 1.8 150 chr2L 18926569 intron ssp3 - chr2L 18926644 intron ssp3 - chr2L 18926719 intron ssp3 - chr2L_7_18925001 chr2L_18925001 RAL-531 460 chr2L 19101821 19101869 chr2L 19101927 19101974 9 106 2.5 3.0 2.8 2.4 153 chr2L 19101821 intron Lim3 - chr2L 19101898 intron Lim3 - chr2L 19101974 intron Lim3 - chr2L_9_19100001 chr2L_19100001 RAL-531 461 chr2L 19121882 19121897 chr2L 19121999 19122014 6 117 4.0 6.0 5.0 1.0 132 chr2L 19121882 3` UTR l(2)37Cc - chr2L 19121948 3` UTR l(2)37Cc - chr2L 19122014 3` UTR l(2)37Cc - chr2L_6_19120001 chr2L_19120001 RAL-531 462 chr2L 19147377 19147397 chr2L 19154415 19154452 297 8 7049 2.5 9.0 5.8 1.2 7075 chr2L 19147377 intron brat + chr2L 19150914 intron brat + chr2L 19154452 intron brat + chr2L_8_19150001 chr2L_19150001 RAL-531 463 chr2L 19163235 19163267 chr2L 19163560 19163592 10 322 4.0 2.5 3.2 2.4 357 chr2L 19163235 intron brat + chr2L 19163414 intron brat + chr2L 19163592 intron brat + chr2L_10_19160001 chr2L_19160001 RAL-531 464 chr2L 19218463 19218488 chr2L 19218563 19218588 7 97 2.5 2.0 2.2 2.2 125 chr2L 19218463 intergenic CR44189 + chr2L 19218526 intergenic CR44189 + chr2L 19218588 intergenic CR44189 + chr2L_7_19215001 chr2L_19215001 RAL-531 465 chr2L 19247377 19247386 chr2L 19247475 19247484 5 98 1.5 4.0 2.8 1.3 107 chr2L 19247377 intergenic not near genes chr2L 19247430 intergenic not near genes chr2L 19247484 intergenic not near genes chr2L_5_19245001 chr2L_19245001 RAL-531 466 chr2L 19269584 19269623 chr2L 19269676 19269690 4 88 1.0 5.0 3.0 1.0 106 chr2L 19269584 3` UTR CR44190 - chr2L 19269637 3` UTR CR44190 - chr2L 19269690 3` UTR CR44190 - chr2L_4_19265001 chr2L_19265001 RAL-531 467 chr2L 19345012 19345043 chr2L 19357223 19357241 blood 10 12222 1.0 2.5 1.8 3.6 12229 chr2L 19345012 intron dnt - chr2L 19351126 intron dnt - chr2L 19357241 intron dnt - chr2L_10_19350001 chr2L_19350001 RAL-531 468 chr2L 19357525 19357562 chr2L 19357635 19357672 9 109 6.0 5.0 5.5 1.4 147 chr2L 19357525 intron dnt - chr2L 19357598 intron dnt - chr2L 19357672 intron dnt - chr2L_9_19355001 chr2L_19355001 RAL-531 469 chr2L 19374914 19374964 chr2L 19375059 19375106 13 143 3.0 1.5 2.2 4.1 192 chr2L 19374914 intergenic not near genes chr2L 19375010 intergenic not near genes chr2L 19375106 intergenic not near genes chr2L_13_19375001 chr2L_19375001 RAL-531 470 chr2L 19378330 19378368 chr2L 19378430 19378469 8 98 1.5 3.5 2.5 2.3 139 chr2L 19378330 intergenic not near genes chr2L 19378400 intergenic not near genes chr2L 19378469 intergenic not near genes chr2L_8_19375001 chr2L_19375001 RAL-531 471 chr2L 19405597 19405631 chr2L 19405707 19405741 11 109 3.5 0.5 2.0 3.7 144 chr2L 19405597 intron Pax - chr2L 19405669 intron Pax - chr2L 19405741 intron Pax - chr2L_11_19405001 chr2L_19405001 RAL-531 472 chr2L 19437509 19437526 chr2L 19437621 19437638 8 112 2.5 0.0 1.2 3.6 129 chr2L 19437509 intron CG10237 - chr2L 19437574 intron CG10237 - chr2L 19437638 intron CG10237 - chr2L_8_19435001 chr2L_19435001 RAL-531 473 chr2L 19441050 19441084 chr2L 19441147 19441181 19 94 6.5 5.0 5.8 2.8 131 chr2L 19441050 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441181 5` UTR CG10237 - chr2L_19_19440001 chr2L_19440001 RAL-531 474 chr2L 19566413 19566427 chr2L 19567264 19567287 5 857 2.0 6.0 4.0 1.0 874 chr2L 19566413 exon CG13077 + chr2L 19566850 intron CG13077 + chr2L 19567287 exon CG13077 + chr2L_5_19565001 chr2L_19565001 RAL-531 475 chr2L 19652548 19652602 chr2L 19674004 19674058 opus 18 21454 3.5 6.0 4.8 3.1 21510 chr2L 19652548 intron Lar + chr2L 19663303 intron Lar + chr2L 19674058 intron Lar + chr2L_18_19660001 chr2L_19660001 RAL-531 476 chr2L 19703520 19703569 chr2L 19712676 19712689 roo 12 9150 4.5 3.0 3.8 2.5 9169 chr2L 19703520 intron Lar + chr2L 19708104 intron Lar + chr2L 19712689 intron Lar + chr2L_12_19705001 chr2L_19705001 RAL-531 477 chr2L 19762797 19762839 chr2L 19763058 19763085 pogo 13 260 2.0 8.0 5.0 2.2 288 chr2L 19762797 5` UTR fbp - chr2L 19762941 intron fbp - chr2L 19763085 intron fbp - chr2L_13_19760001 chr2L_19760001 RAL-531 478 chr2L 19824395 19824419 chr2L 19824498 19824522 5 100 3.5 3.5 3.5 1.1 127 chr2L 19824395 intron sick + chr2L 19824458 intron sick + chr2L 19824522 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-531 479 chr2L 19837960 19837968 chr2L 19838113 19838120 4 153 7.5 0.5 4.0 0.8 160 chr2L 19837960 intron sick + chr2L 19838040 intron sick + chr2L 19838120 intron sick + chr2L_4_19835001 chr2L_19835001 RAL-531 480 chr2L 19840957 19840980 chr2L 19841557 19841593 8 607 1.5 1.5 1.5 3.2 636 chr2L 19840957 intron sick + chr2L 19841275 intron sick + chr2L 19841593 intron sick + chr2L_8_19840001 chr2L_19840001 RAL-531 481 chr2L 19887781 19887790 chr2L 19887907 19887916 4 126 1.0 1.0 1.0 2.0 135 chr2L 19887781 intron sick + chr2L 19887848 intron sick + chr2L 19887916 intron sick + chr2L_4_19885001 chr2L_19885001 RAL-531 482 chr2L 19911691 19911730 chr2L 19911800 19911838 8 105 0.5 6.5 3.5 1.8 147 chr2L 19911691 intron,3` UTR sick +,CR43097 - chr2L 19911764 intron,3` UTR sick +,CR43097 - chr2L 19911838 intron,3` UTR sick +,TotF - chr2L_8_19910001 chr2L_19910001 RAL-531 483 chr2L 19973348 19973386 chr2L 19973445 19973477 11 90 4.0 4.5 4.2 2.1 129 chr2L 19973348 intron CG43861 - chr2L 19973412 intron CG43861 - chr2L 19973477 intron CG43861 - chr2L_11_19970001 chr2L_19970001 RAL-531 484 chr2L 19994657 19994675 chr2L 19994730 19994775 4 86 2.5 4.0 3.2 1.0 118 chr2L 19994657 intron CG43861 - chr2L 19994716 intron CG43861 - chr2L 19994775 intron CG43861 - chr2L_4_19990001 chr2L_19990001 RAL-531 485 chr2L 20005855 20005899 chr2L 20010951 20010995 flea 17 5094 7.0 2.0 4.5 3.1 5140 chr2L 20005855 intron CG43861 - chr2L 20008425 intron CG43861 - chr2L 20010995 intron CG43861 - chr2L_17_20005001 chr2L_20005001 RAL-531 486 chr2L 20036515 20036557 chr2L 20036619 20036661 10 104 1.5 5.5 3.5 2.2 146 chr2L 20036515 intron sNPF + chr2L 20036588 intron sNPF + chr2L 20036661 intron sNPF + chr2L_10_20035001 chr2L_20035001 RAL-531 487 chr2L 20079512 20079548 chr2L 20079638 20079688 21 133 3.5 0.0 1.8 7.5 176 chr2L 20079512 intron,intron neb +,fok - chr2L 20079600 intron,intron neb +,fok - chr2L 20079688 intron,intron neb +,fok - chr2L_21_20075001 chr2L_20075001 RAL-531 488 chr2L 20085480 20085496 chr2L 20085558 20085582 5 87 1.5 3.0 2.2 1.6 102 chr2L 20085480 intron neb + chr2L 20085531 intron neb + chr2L 20085582 intron neb + chr2L_5_20085001 chr2L_20085001 RAL-531 489 chr2L 20087267 20087276 chr2L 20087362 20087392 7 109 1.5 7.0 4.2 1.3 125 chr2L 20087267 intron neb + chr2L 20087330 intron neb + chr2L 20087392 intron neb + chr2L_7_20085001 chr2L_20085001 RAL-531 490 chr2L 20127954 20128006 chr2L 20128058 20128110 20 104 5.0 3.5 4.2 3.8 156 chr2L 20127954 intergenic not near genes chr2L 20128032 intergenic not near genes chr2L 20128110 intergenic not near genes chr2L_20_20125001 chr2L_20125001 RAL-531 491 chr2L 20254542 20254582 chr2L 20254838 20254881 17 300 3.0 4.0 3.5 3.8 339 chr2L 20254542 intergenic CR40465 - chr2L 20254712 intergenic CR40465 - chr2L 20254881 intergenic CR40465 - chr2L_17_20250001 chr2L_20250001 RAL-531 492 chr2L 20272097 20272115 chr2L 20282827 20282846 copia 9 10730 8.5 6.5 7.5 1.1 10749 chr2L 20272097 intergenic not near genes chr2L 20277472 intergenic not near genes chr2L 20282846 intergenic not near genes chr2L_9_20275001 chr2L_20275001 RAL-531 493 chr2L 20272116 20272143 chr2L 20282824 20282869 copia 8 10724 4.5 6.5 5.5 1.2 10753 chr2L 20272116 intergenic not near genes chr2L 20277492 intergenic not near genes chr2L 20282869 intergenic not near genes chr2L_8_20275001 chr2L_20275001 RAL-531 494 chr2L 20303162 20303184 chr2L 20310645 20310672 blood 7 7487 0.5 7.5 4.0 1.4 7510 chr2L 20303162 intergenic not near genes chr2L 20306917 intergenic not near genes chr2L 20310672 intergenic not near genes chr2L_7_20305001 chr2L_20305001 RAL-531 495 chr2L 20310878 20310915 chr2L 20310977 20311005 9 99 0.0 6.0 3.0 2.2 127 chr2L 20310878 intergenic spir + chr2L 20310942 intergenic spir + chr2L 20311005 intergenic spir + chr2L_9_20310001 chr2L_20310001 RAL-531 496 chr2L 20320027 20320065 chr2L 20320149 20320204 4 135 5.0 0.0 2.5 1.1 177 chr2L 20320027 intron spir + chr2L 20320116 intron spir + chr2L 20320204 intron spir + chr2L_4_20320001 chr2L_20320001 RAL-531 497 chr2L 20372213 20372254 chr2L 20372474 20372515 pogo 15 260 8.5 5.5 7.0 1.9 302 chr2L 20372213 intergenic Ugt37a1 - chr2L 20372364 intergenic Ugt37a1 - chr2L 20372515 exon Ugt37a1 - chr2L_15_20370001 chr2L_20370001 RAL-531 498 chr2L 20498670 20498689 chr2L 20498789 20498808 5 119 7.0 2.0 4.5 0.9 138 chr2L 20498670 intergenic not near genes chr2L 20498739 intergenic not near genes chr2L 20498808 intergenic not near genes chr2L_5_20495001 chr2L_20495001 RAL-531 499 chr2L 20568646 20568682 chr2L 20569056 20569092 X-element 5 409 5.5 1.5 3.5 1.1 446 chr2L 20568646 intron CR45347 + chr2L 20568869 intron CR45347 + chr2L 20569092 intron CR45347 + chr2L_5_20565001 chr2L_20565001 RAL-531 500 chr2L 20576210 20576222 chr2L 20583697 20583710 blood 5 7488 6.5 4.0 5.2 0.8 7500 chr2L 20576210 intergenic CR45347 + chr2L 20579960 intergenic not near genes chr2L 20583710 3` UTR CR44909 - chr2L_5_20575001 chr2L_20575001 RAL-531 501 chr2L 20611239 20611260 chr2L 20611324 20611337 7 91 0.5 1.5 1.0 3.5 98 chr2L 20611239 intron CR44909 - chr2L 20611288 intron CR44909 - chr2L 20611337 intron CR44909 - chr2L_7_20610001 chr2L_20610001 RAL-531 502 chr2L 20626099 20626129 chr2L 20626225 20626246 11 124 3.5 9.5 6.5 1.5 147 chr2L 20626099 3` UTR CR44909 - chr2L 20626172 3` UTR CR44909 - chr2L 20626246 intergenic CR44909 - chr2L_11_20625001 chr2L_20625001 RAL-531 503 chr2L 20668671 20668714 chr2L 20668767 20668810 16 96 6.0 5.5 5.8 2.4 139 chr2L 20668671 intron CG31678 - chr2L 20668740 intron CG31678 - chr2L 20668810 intron CG31678 - chr2L_16_20665001 chr2L_20665001 RAL-531 504 chr2L 20674813 20674862 chr2L 20674918 20674959 6 100 3.5 0.0 1.8 2.1 146 chr2L 20674813 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674959 intron CG31678 - chr2L_6_20670001 chr2L_20670001 RAL-531 505 chr2L 20703639 20703688 chr2L 20704266 20704273 12 618 7.0 5.0 6.0 1.7 634 chr2L 20703639 intron Hr38 - chr2L 20703956 intron Hr38 - chr2L 20704273 intron Hr38 - chr2L_12_20700001 chr2L_20700001 RAL-531 506 chr2L 20817977 20818016 chr2L 20818066 20818114 13 95 2.5 3.0 2.8 3.4 137 chr2L 20817977 exon CheB38a - chr2L 20818046 intron CheB38a - chr2L 20818114 exon CheB38a - chr2L_13_20815001 chr2L_20815001 RAL-531 507 chr2L 20824908 20824949 chr2L 20826637 20826642 11 1720 10.5 20.0 15.2 0.7 1734 chr2L 20824908 intron CG9331 + chr2L 20825775 exon CG9331 + chr2L 20826642 exon CG9331 + chr2L_11_20825001 chr2L_20825001 RAL-531 508 chr2L 20835793 20835840 chr2L 20836530 20836577 Quasimodo 19 737 3.5 1.5 2.5 5.4 784 chr2L 20835793 5` UTR Oseg5 - chr2L 20836185 intergenic Oseg5 -,Spn38F - chr2L 20836577 intergenic Spn38F - chr2L_19_20835001 chr2L_20835001 RAL-531 509 chr2L 20891529 20891568 chr2L 20896637 20896688 jockey 15 5118 4.0 3.5 3.8 3.1 5159 chr2L 20891529 intron,intron CG43739 -,sky - chr2L 20894108 intron,intron CG43739 -,sky - chr2L 20896688 intron,intron CG43739 -,sky - chr2L_15_20890001 chr2L_20890001 RAL-531 510 chr2L 20913264 20913285 chr2L 20913400 20913408 6 131 5.5 2.0 3.8 1.2 144 chr2L 20913264 intron,intron CG43739 -,sky - chr2L 20913336 intron,intron CG43739 -,sky - chr2L 20913408 intron,intron CG43739 -,sky - chr2L_6_20910001 chr2L_20910001 RAL-531 511 chr2L 20913290 20913308 chr2L 20913399 20913445 8 127 2.0 2.0 2.0 2.7 155 chr2L 20913290 intron,intron CG43739 -,sky - chr2L 20913368 intron,intron CG43739 -,sky - chr2L 20913445 intron,intron CG43739 -,sky - chr2L_8_20910001 chr2L_20910001 RAL-531 512 chr2L 20967074 20967099 chr2L 20967176 20967205 10 104 1.5 4.0 2.8 2.6 131 chr2L 20967074 3` UTR CG42238 - chr2L 20967140 3` UTR CG42238 - chr2L 20967205 3` UTR CG42238 - chr2L_10_20965001 chr2L_20965001 RAL-531 513 chr2L 20976639 20976675 chr2L 20981474 20981494 X-element 6 4832 3.5 5.0 4.2 1.2 4855 chr2L 20976639 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981494 intron CG42238 - chr2L_6_20975001 chr2L_20975001 RAL-531 514 chr2L 20984717 20984767 chr2L 20984829 20984878 7 110 2.5 5.0 3.8 1.5 161 chr2L 20984717 intron CG42238 - chr2L 20984798 intron CG42238 - chr2L 20984878 intron CG42238 - chr2L_7_20980001 chr2L_20980001 RAL-531 515 chr2L 20986897 20986923 chr2L 20987254 20987280 10 356 5.0 2.5 3.8 2.1 383 chr2L 20986897 intron CG42238 - chr2L 20987088 intron CG42238 - chr2L 20987280 intron CG42238 - chr2L_10_20985001 chr2L_20985001 RAL-531 516 chr2L 20991018 20991061 chr2L 20991116 20991159 12 93 3.5 3.5 3.5 2.7 141 chr2L 20991018 intron CG42238 - chr2L 20991088 intron CG42238 - chr2L 20991159 intron CG42238 - chr2L_12_20990001 chr2L_20990001 RAL-531 517 chr2L 21020253 21020309 chr2L 21023950 21023990 NOF 5 3690 2.5 2.5 2.5 1.4 3737 chr2L 21020253 intron CG42238 - chr2L 21022122 intron CG42238 - chr2L 21023990 intron CG42238 - chr2L_5_21020001 chr2L_21020001 RAL-531 518 chr2L 21041157 21041167 chr2L 21049402 21049443 Tirant 5 8266 4.0 4.5 4.2 1.0 8286 chr2L 21041157 intron CG42238 - chr2L 21045300 intron CG42238 - chr2L 21049443 intron CG42238 - chr2L_5_21045001 chr2L_21045001 RAL-531 519 chr2L 21113666 21113679 chr2L 21113779 21113787 6 110 8.5 4.0 6.2 0.8 121 chr2L 21113666 intron Nhe2 + chr2L 21113726 intron Nhe2 + chr2L 21113787 intron Nhe2 + chr2L_6_21110001 chr2L_21110001 RAL-531 520 chr2L 21113684 21113715 chr2L 21113778 21113823 10 106 2.5 4.0 3.2 2.4 139 chr2L 21113684 intron Nhe2 + chr2L 21113754 intron Nhe2 + chr2L 21113823 intron Nhe2 + chr2L_10_21110001 chr2L_21110001 RAL-531 521 chr2L 21119268 21119311 chr2L 21119372 21119415 17 104 2.5 6.0 4.2 3.3 147 chr2L 21119268 intron Nhe2 + chr2L 21119342 intron Nhe2 + chr2L 21119415 intron Nhe2 + chr2L_17_21115001 chr2L_21115001 RAL-531 522 chr2L 21124509 21124561 chr2L 21124615 21124667 17 105 3.5 3.5 3.5 3.8 158 chr2L 21124509 exon Nhe2 + chr2L 21124588 intron Nhe2 + chr2L 21124667 intron Nhe2 + chr2L_17_21120001 chr2L_21120001 RAL-531 523 chr2L 21233956 21233991 chr2L 21234073 21234108 10 116 6.0 5.0 5.5 1.5 152 chr2L 21233956 intron,5` UTR CG31626 -,CR45713 + chr2L 21234032 intron,5` UTR CG31626 -,CR45713 + chr2L 21234108 intron CG31626 - chr2L_10_21230001 chr2L_21230001 RAL-531 524 chr2L 21284569 21284580 chr2L 21286380 21286391 6 1811 32.0 27.0 29.5 0.2 1822 chr2L 21284569 intergenic not near genes chr2L 21285480 intergenic not near genes chr2L 21286391 exon Mio - chr2L_6_21285001 chr2L_21285001 RAL-531 525 chr2L 21284561 21284596 chr2L 21286392 21286407 9 1813 33.5 25.5 29.5 0.3 1846 chr2L 21284561 intergenic not near genes chr2L 21285484 intergenic not near genes chr2L 21286407 exon Mio - chr2L_9_21285001 chr2L_21285001 RAL-531 526 chr2L 21286590 21286621 chr2L 21286688 21286719 12 98 6.5 7.0 6.8 1.5 129 chr2L 21286590 exon Mio - chr2L 21286654 intron Mio - chr2L 21286719 intron Mio - chr2L_12_21285001 chr2L_21285001 RAL-531 527 chr2L 21347533 21347580 chr2L 21355024 21355071 blood 10 7489 6.0 9.0 7.5 1.2 7538 chr2L 21347533 intron Tsp39D + chr2L 21351302 intron Tsp39D + chr2L 21355071 intron Tsp39D + chr2L_10_21350001 chr2L_21350001 RAL-531 528 chr2L 21369729 21369752 chr2L 21370230 21370253 9 501 31.0 9.0 20.0 0.4 524 chr2L 21369729 intergenic Gr39b - chr2L 21369991 intergenic Gr39b - chr2L 21370253 intergenic not near genes chr2L_9_21365001 chr2L_21365001 RAL-531 529 chr2L 21372948 21372999 chr2L 21373205 21373256 Bari1 14 257 2.0 9.5 5.8 2.1 308 chr2L 21372948 intron CG8665 + chr2L 21373102 intron CG8665 + chr2L 21373256 intron CG8665 + chr2L_14_21370001 chr2L_21370001 RAL-531 530 chr2L 21373368 21373414 chr2L 21373490 21373536 15 120 3.0 3.0 3.0 3.8 168 chr2L 21373368 intron CG8665 + chr2L 21373452 intron CG8665 + chr2L 21373536 intron CG8665 + chr2L_15_21370001 chr2L_21370001 RAL-531 531 chr2L 21392211 21392246 chr2L 21392297 21392300 6 89 3.0 2.0 2.5 1.7 89 chr2L 21392211 3` UTR nrv3 + chr2L 21392256 3` UTR nrv3 + chr2L 21392300 3` UTR nrv3 + chr2L_6_21390001 chr2L_21390001 RAL-531 532 chr2L 21597046 21597060 chr2L 21604782 21604793 roo 5 7752 4.0 3.0 3.5 1.1 7747 chr2L 21597046 intergenic not near genes chr2L 21600920 intergenic not near genes chr2L 21604793 intergenic not near genes chr2L_5_21600001 chr2L_21600001 RAL-531 533 chr2L 21619053 21619089 chr2L 21621089 21621104 4 2031 4.0 2.0 3.0 1.0 2051 chr2L 21619053 intron CG2201 - chr2L 21620078 intron CG2201 - chr2L 21621104 intron CG2201 - chr2L_4_21620001 chr2L_21620001 RAL-531 534 chr2L 21691808 21691838 chr2L 21698298 21698328 Burdock 12 6488 9.5 0.0 4.8 2.1 6520 chr2L 21691808 intron CG31619 + chr2L 21695068 intron CG31619 + chr2L 21698328 intron CG31619 + chr2L_12_21695001 chr2L_21695001 RAL-531 535 chr2L 21745230 21745279 chr2L 21745340 21745380 20 108 2.5 5.5 4.0 4.0 150 chr2L 21745230 intron step - chr2L 21745305 intron step - chr2L 21745380 intron step - chr2L_20_21745001 chr2L_21745001 RAL-531 536 chr2L 21750081 21750125 chr2L 21750421 21750468 16 341 5.0 4.5 4.8 2.8 387 chr2L 21750081 intron step - chr2L 21750274 intron step - chr2L 21750468 intron step - chr2L_16_21750001 chr2L_21750001 RAL-531 537 chr2L 21790889 21790930 chr2L 21790997 21791035 9 108 4.0 8.0 6.0 1.3 146 chr2L 21790889 intron CG31612 - chr2L 21790962 intron CG31612 - chr2L 21791035 intron CG31612 - chr2L_9_21790001 chr2L_21790001 RAL-531 538 chr2L 21806209 21806258 chr2L 21806331 21806381 14 118 2.0 4.0 3.0 3.5 172 chr2L 21806209 intergenic not near genes chr2L 21806295 intergenic not near genes chr2L 21806381 intergenic not near genes chr2L_14_21805001 chr2L_21805001 RAL-531 539 chr2L 21825148 21825175 chr2L 21825587 21825629 10 444 4.5 2.5 3.5 2.2 481 chr2L 21825148 intergenic not near genes chr2L 21825388 intergenic not near genes chr2L 21825629 intergenic not near genes chr2L_10_21825001 chr2L_21825001 RAL-531 540 chr2L 21886620 21886649 chr2L 21886717 21886748 4 90 0.5 1.5 1.0 2.0 128 chr2L 21886620 intergenic not near genes chr2L 21886684 intergenic not near genes chr2L 21886748 intergenic not near genes chr2L_4_21885001 chr2L_21885001 RAL-531 541 chr2L 21926754 21926796 chr2L 21926858 21926896 8 94 4.0 4.5 4.2 1.5 142 chr2L 21926754 intergenic not near genes chr2L 21926825 intergenic not near genes chr2L 21926896 intergenic not near genes chr2L_8_21925001 chr2L_21925001 RAL-531 542 chr2L 21981675 21981710 chr2L 21990848 21990889 roo 9 9181 2.5 2.0 2.2 2.8 9214 chr2L 21981675 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990889 exon CG2528 - chr2L_9_21985001 chr2L_21985001 RAL-531 543 chr2L 21994871 21994905 chr2L 21994967 21995000 12 96 3.0 3.5 3.2 2.9 129 chr2L 21994871 intergenic not near genes chr2L 21994936 intergenic not near genes chr2L 21995000 intergenic not near genes chr2L_12_21990001 chr2L_21990001 RAL-531 544 chr2L 22002806 22002807 chr2L 22004411 22004412 4 1605 15.0 23.5 19.2 0.2 1606 chr2L 22002806 intergenic not near genes chr2L 22003609 intergenic not near genes chr2L 22004412 intergenic not near genes chr2L_4_22000001 chr2L_22000001 RAL-531 545 chr2L 22036715 22036754 chr2L 22036920 22036959 14 205 1.5 1.5 1.5 5.6 244 chr2L 22036715 intergenic not near genes chr2L 22036837 intergenic not near genes chr2L 22036959 intergenic not near genes chr2L_14_22035001 chr2L_22035001 RAL-531 546 chr2L 22109366 22109419 chr2L 22109476 22109529 12 101 2.0 1.5 1.8 4.3 163 chr2L 22109366 exon CG6675 + chr2L 22109448 exon CG6675 + chr2L 22109529 exon CG6675 + chr2L_12_22105001 chr2L_22105001 RAL-531 547 chr2L 22191947 22192058 chr2L 22192045 22192167 14 104 0.0 0.0 0.0 14.0 220 chr2L 22191947 intron Ir40a - chr2L 22192057 intron Ir40a - chr2L 22192167 intron Ir40a - chr2L_14_22190001 chr2L_22190001 RAL-531 548 chr2L 22197882 22197909 chr2L 22198101 22198128 7 219 5.5 7.0 6.2 1.0 246 chr2L 22197882 intron Ir40a - chr2L 22198005 intron Ir40a - chr2L 22198128 intron Ir40a - chr2L_7_22195001 chr2L_22195001 RAL-531 549 chr2L 22212120 22212163 chr2L 22212687 22212730 16 567 4.0 3.0 3.5 3.6 610 chr2L 22212120 intron Ir40a - chr2L 22212425 intron Ir40a - chr2L 22212730 exon Ir40a - chr2L_16_22210001 chr2L_22210001 RAL-531 550 chr2L 22258599 22258639 chr2L 22260743 22260769 G6 11 2140 6.0 6.5 6.2 1.5 2170 chr2L 22258599 intergenic Tif-IA + chr2L 22259684 intergenic not near genes chr2L 22260769 intergenic not near genes chr2L_11_22255001 chr2L_22255001 RAL-531 551 chr2L 22294343 22294382 chr2L 22294451 22294490 20 108 3.0 3.0 3.0 5.0 147 chr2L 22294343 intergenic not near genes chr2L 22294416 intergenic not near genes chr2L 22294490 intergenic not near genes chr2L_20_22290001 chr2L_22290001 RAL-531 552 chr2L 22319156 22319190 chr2L 22319301 22319332 11 139 3.0 6.0 4.5 2.0 176 chr2L 22319156 intron CG17018 + chr2L 22319244 intron CG17018 + chr2L 22319332 intron CG17018 + chr2L_11_22315001 chr2L_22315001 RAL-531 553 chr2L 22326643 22326692 chr2L 22326745 22326794 14 100 1.5 2.5 2.0 4.7 151 chr2L 22326643 intron CG17018 + chr2L 22326718 intron CG17018 + chr2L 22326794 intron CG17018 + chr2L_14_22325001 chr2L_22325001 RAL-531 554 chr2L 22490480 22490527 chr2L 22497636 22497724 springer 4 7158 0.0 0.0 0.0 4.0 7244 chr2L 22490480 intergenic not near genes chr2L 22494102 intergenic not near genes chr2L 22497724 intergenic not near genes chr2L_4_22490001 chr2L_22490001 RAL-531 555 chr2L 22534587 22534629 chr2L 22534708 22534745 13 120 3.5 5.0 4.2 2.5 158 chr2L 22534587 3` UTR RpL5 - chr2L 22534666 3` UTR RpL5 - chr2L 22534745 3` UTR RpL5 - chr2L_13_22530001 chr2L_22530001 RAL-531 556 chr2L 22537418 22537453 chr2L 22537611 22537659 12 195 6.0 6.0 6.0 1.7 241 chr2L 22537418 intergenic not near genes chr2L 22537538 intergenic not near genes chr2L 22537659 intergenic not near genes chr2L_12_22535001 chr2L_22535001 RAL-531 557 chr2L 22581950 22581997 chr2L 22583759 22583806 S-element 19 1809 6.5 4.0 5.2 3.1 1856 chr2L 22581950 intron CG17494 + chr2L 22582878 intron CG17494 + chr2L 22583806 intron CG17494 + chr2L_19_22580001 chr2L_22580001 RAL-531 558 chr2L 22674052 22674076 chr2L 22674148 22674158 11 96 5.0 4.5 4.8 1.9 106 chr2L 22674052 intron CG40006 - chr2L 22674105 intron CG40006 - chr2L 22674158 intron CG40006 - chr2L_11_22670001 chr2L_22670001 RAL-531 559 chr2L 22696856 22696874 chr2L 22696958 22696976 5 102 5.0 8.5 6.8 0.6 120 chr2L 22696856 intron CG40006 - chr2L 22696916 intron CG40006 - chr2L 22696976 intron CG40006 - chr2L_5_22695001 chr2L_22695001 RAL-531 560 chr2L 22776400 22776451 chr2L 22778209 22778260 S-element 17 1807 2.5 5.5 4.0 3.4 1860 chr2L 22776400 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778260 intergenic not near genes chr2L_17_22775001 chr2L_22775001 RAL-531 561 chr2R 469967 469989 chr2R 473192 473214 F-element 5 3235 1.0 11.0 6.0 0.7 3247 chr2R 469967 intergenic not near genes chr2R 471590 intergenic not near genes chr2R 473214 intergenic not near genes chr2R_5_470001 chr2R_470001 RAL-531 562 chr2R 529331 529355 chr2R 537946 537956 Max-element 7 8622 6.0 4.5 5.2 1.1 8625 chr2R 529331 intron CG40378 + chr2R 533644 intron CG40378 + chr2R 537956 intron CG40378 + chr2R_7_530001 chr2R_530001 RAL-531 563 chr2R 652234 652252 chr2R 652782 652804 4 553 13.0 11.0 12.0 0.3 570 chr2R 652234 intergenic not near genes chr2R 652519 intergenic not near genes chr2R 652804 intergenic not near genes chr2R_4_650001 chr2R_650001 RAL-531 564 chr2R 699102 699110 chr2R 705338 705346 297 5 6236 12.0 3.0 7.5 0.6 6244 chr2R 699102 intron CG43676 + chr2R 702224 intron CG43676 + chr2R 705346 intron CG43676 + chr2R_5_700001 chr2R_700001 RAL-531 565 chr2R 1320204 1320204 chr2R 21358403 21358403 5 20038199 12.5 3.0 7.8 0.6 20038199 chr2R 1320204 intergenic not near genes chr2R 11339304 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_5_11335001 chr2R_11335001 RAL-531 566 chr2R 1516586 1516603 chr2R 1521333 1521351 1731 19 4747 23.0 12.0 17.5 1.0 4765 chr2R 1516586 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521351 5` UTR Maf1 - chr2R_19_1515001 chr2R_1515001 RAL-531 567 chr2R 1732832 1732881 chr2R 1732999 1733031 9 164 3.0 2.5 2.8 2.4 199 chr2R 1732832 intron CG41520 + chr2R 1732932 intron CG41520 + chr2R 1733031 intron CG41520 + chr2R_9_1730001 chr2R_1730001 RAL-531 568 chr2R 2015124 2015163 chr2R 2015211 2015260 8 93 3.0 1.0 2.0 2.7 136 chr2R 2015124 intron CG17684 - chr2R 2015192 intron CG17684 - chr2R 2015260 intron CG17684 - chr2R_8_2015001 chr2R_2015001 RAL-531 569 chr2R 2110489 2110498 chr2R 2118067 2118076 17.6 7 7577 2.5 3.5 3.0 1.8 7587 chr2R 2110489 intron CG17684 - chr2R 2114282 intron CG17684 - chr2R 2118076 intron CG17684 - chr2R_7_2110001 chr2R_2110001 RAL-531 570 chr2R 2498978 2499007 chr2R 2508145 2508174 roo 9 9166 2.5 5.0 3.8 1.9 9196 chr2R 2498978 intron MFS17 - chr2R 2503576 intron MFS17 - chr2R 2508174 intron MFS17 - chr2R_9_2500001 chr2R_2500001 RAL-531 571 chr2R 3091381 3091417 chr2R 3092147 3092170 10 764 4.0 3.0 3.5 2.2 789 chr2R 3091381 intron CG42596 + chr2R 3091776 intron CG42596 + chr2R 3092170 intron CG42596 + chr2R_10_3090001 chr2R_3090001 RAL-531 572 chr2R 3291958 3292100 chr2R 3915107 3915260 5 623164 6.5 20.5 13.5 0.3 623302 chr2R 3291958 intergenic not near genes chr2R 3603609 intergenic not near genes chr2R 3915260 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-531 573 chr2R 3532598 3532642 chr2R 3536061 3536105 Doc 12 3462 5.0 4.0 4.5 2.2 3507 chr2R 3532598 intergenic not near genes chr2R 3534352 intergenic not near genes chr2R 3536105 intergenic not near genes chr2R_12_3530001 chr2R_3530001 RAL-531 574 chr2R 3927670 3927719 chr2R 3927787 3927836 10 116 6.0 2.5 4.2 1.9 166 chr2R 3927670 intron uex - chr2R 3927753 intron uex - chr2R 3927836 intron uex - chr2R_10_3925001 chr2R_3925001 RAL-531 575 chr2R 4015296 4015347 chr2R 4015489 4015540 19 191 4.5 5.5 5.0 3.2 244 chr2R 4015296 intron Haspin + chr2R 4015418 intron Haspin + chr2R 4015540 intron Haspin + chr2R_19_4015001 chr2R_4015001 RAL-531 576 chr2R 4312935 4312986 chr2R 4313039 4313090 19 99 0.0 1.5 0.8 10.6 155 chr2R 4312935 intergenic not near genes chr2R 4313012 intergenic not near genes chr2R 4313090 intergenic not near genes chr2R_19_4310001 chr2R_4310001 RAL-531 577 chr2R 4329543 4329558 chr2R 4329649 4329661 6 103 1.5 3.5 2.5 1.7 118 chr2R 4329543 intron Gprk1 - chr2R 4329602 intron Gprk1 - chr2R 4329661 intron Gprk1 - chr2R_6_4325001 chr2R_4325001 RAL-531 578 chr2R 4350748 4350791 chr2R 4350845 4350891 13 99 6.5 6.0 6.2 1.8 143 chr2R 4350748 exon Gprk1 - chr2R 4350820 intron Gprk1 - chr2R 4350891 intron Gprk1 - chr2R_13_4350001 chr2R_4350001 RAL-531 579 chr2R 4508141 4508171 chr2R 4508242 4508257 8 98 8.5 2.5 5.5 1.2 116 chr2R 4508141 intron CR44100 + chr2R 4508199 intron CR44100 + chr2R 4508257 5` UTR CR44100 + chr2R_8_4505001 chr2R_4505001 RAL-531 580 chr2R 4688105 4688122 chr2R 4688201 4688233 7 99 3.0 4.0 3.5 1.6 128 chr2R 4688105 intergenic not near genes chr2R 4688169 intergenic not near genes chr2R 4688233 intergenic not near genes chr2R_7_4685001 chr2R_4685001 RAL-531 581 chr2R 4783404 4783452 chr2R 4783496 4783544 9 90 2.5 5.0 3.8 1.9 140 chr2R 4783404 intergenic not near genes chr2R 4783474 intergenic not near genes chr2R 4783544 intergenic not near genes chr2R_9_4780001 chr2R_4780001 RAL-531 582 chr2R 4821195 4821245 chr2R 4821301 4821346 11 104 3.0 7.5 5.2 1.8 151 chr2R 4821195 intron CG17528 - chr2R 4821270 intron CG17528 - chr2R 4821346 intron CG17528 - chr2R_11_4820001 chr2R_4820001 RAL-531 583 chr2R 4838853 4838903 chr2R 4840395 4840440 transib2 13 1541 5.0 4.0 4.5 2.4 1587 chr2R 4838853 intergenic not near genes chr2R 4839646 intergenic not near genes chr2R 4840440 intergenic not near genes chr2R_13_4835001 chr2R_4835001 RAL-531 584 chr2R 4870725 4870743 chr2R 4871256 4871274 R1A1-element 4 530 2.5 5.0 3.8 0.8 549 chr2R 4870725 intergenic not near genes chr2R 4871000 intergenic not near genes chr2R 4871274 intergenic not near genes chr2R_4_4870001 chr2R_4870001 RAL-531 585 chr2R 4957003 4957041 chr2R 4957121 4957164 13 121 5.0 3.5 4.2 2.5 161 chr2R 4957003 intron Ir41a + chr2R 4957084 intron Ir41a + chr2R 4957164 intron Ir41a + chr2R_13_4955001 chr2R_4955001 RAL-531 586 chr2R 5008876 5008894 chr2R 5009965 5009983 4 1088 0.0 4.5 2.2 1.2 1107 chr2R 5008876 intron Ir41a + chr2R 5009430 intron Ir41a + chr2R 5009983 intron Ir41a + chr2R_4_5005001 chr2R_5005001 RAL-531 587 chr2R 5022730 5022751 chr2R 5031521 5031566 5 8800 23.5 15.5 19.5 0.2 8836 chr2R 5022730 intergenic not near genes chr2R 5027148 intergenic not near genes chr2R 5031566 intergenic CR44105 - chr2R_5_5025001 chr2R_5025001 RAL-531 588 chr2R 5075929 5075979 chr2R 5076072 5076121 6 146 35.0 45.0 40.0 0.1 192 chr2R 5075929 intergenic not near genes chr2R 5076025 intergenic not near genes chr2R 5076121 intergenic not near genes chr2R_6_5075001 chr2R_5075001 RAL-531 589 chr2R 5125228 5125271 chr2R 5125566 5125607 4 337 1.5 3.5 2.5 1.1 379 chr2R 5125228 intron gus - chr2R 5125418 intron gus - chr2R 5125607 intron gus - chr2R_4_5125001 chr2R_5125001 RAL-531 590 chr2R 5237359 5237373 chr2R 5237461 5237470 5 101 0.5 0.5 0.5 3.3 111 chr2R 5237359 intron Nipped-A - chr2R 5237414 intron Nipped-A - chr2R 5237470 intron Nipped-A - chr2R_5_5235001 chr2R_5235001 RAL-531 591 chr2R 5256737 5256785 chr2R 5256845 5256891 15 104 6.5 5.5 6.0 2.1 154 chr2R 5256737 intergenic not near genes chr2R 5256814 intergenic not near genes chr2R 5256891 intergenic not near genes chr2R_15_5255001 chr2R_5255001 RAL-531 592 chr2R 5258542 5258570 chr2R 5262245 5262250 S-element 4 3695 39.5 16.5 28.0 0.1 3708 chr2R 5258542 intergenic d4 + chr2R 5260396 intron d4 + chr2R 5262250 intron d4 + chr2R_4_5260001 chr2R_5260001 RAL-531 593 chr2R 5302088 5302134 chr2R 5304222 5304265 7 2131 47.0 54.0 50.5 0.1 2177 chr2R 5302088 intergenic not near genes chr2R 5303176 intergenic not near genes chr2R 5304265 intergenic not near genes chr2R_7_5300001 chr2R_5300001 RAL-531 594 chr2R 5417975 5418026 chr2R 5420627 5420678 Burdock 21 2649 6.0 4.0 5.0 3.5 2703 chr2R 5417975 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420678 intron laccase2 + chr2R_21_5415001 chr2R_5415001 RAL-531 595 chr2R 5491645 5491686 chr2R 5491754 5491799 10 105 7.0 4.5 5.8 1.5 154 chr2R 5491645 intron CG30440 - chr2R 5491722 intron CG30440 - chr2R 5491799 intron CG30440 - chr2R_10_5490001 chr2R_5490001 RAL-531 596 chr2R 5542107 5542124 chr2R 7556625 7556627 4 2014514 13.0 15.5 14.2 0.3 2014520 chr2R 5542107 intron CG30438 + chr2R 6549367 intron jing + chr2R 7556627 intron Corin + chr2R_4_6545001 chr2R_6545001 RAL-531 597 chr2R 5543199 5543216 chr2R 5547273 5547320 invader1 7 4098 0.0 4.0 2.0 2.3 4121 chr2R 5543199 intron CG30438 + chr2R 5545260 intron CG30438 + chr2R 5547320 intron CG30438 + chr2R_7_5545001 chr2R_5545001 RAL-531 598 chr2R 5581406 5581410 chr2R 5627614 5627639 4 46224 2.0 6.0 4.0 0.8 46233 chr2R 5581406 intergenic not near genes chr2R 5604522 intron Fis1 - chr2R 5627639 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-531 599 chr2R 5581412 5581420 chr2R 5627605 5627649 4 46217 0.5 4.0 2.2 1.2 46237 chr2R 5581412 intergenic not near genes chr2R 5604530 intron Fis1 - chr2R 5627649 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-531 600 chr2R 5702218 5702240 chr2R 5702305 5702328 6 92 7.0 5.5 6.2 0.8 110 chr2R 5702218 5` UTR vlc + chr2R 5702273 5` UTR vlc + chr2R 5702328 5` UTR vlc + chr2R_6_5700001 chr2R_5700001 RAL-531 601 chr2R 5712293 5712310 chr2R 5712389 5712396 5 94 10.0 4.5 7.2 0.6 103 chr2R 5712293 intron ap - chr2R 5712344 intron ap - chr2R 5712396 intron ap - chr2R_5_5710001 chr2R_5710001 RAL-531 602 chr2R 5712316 5712338 chr2R 5712386 5712405 9 84 6.0 4.0 5.0 1.5 89 chr2R 5712316 intron ap - chr2R 5712360 intron ap - chr2R 5712405 intron ap - chr2R_9_5710001 chr2R_5710001 RAL-531 603 chr2R 5718853 5718901 chr2R 5718973 5718993 12 113 2.0 2.5 2.2 3.8 140 chr2R 5718853 intron ap - chr2R 5718923 intron ap - chr2R 5718993 intron ap - chr2R_12_5715001 chr2R_5715001 RAL-531 604 chr2R 5750435 5750450 chr2R 5750547 5750562 4 111 6.5 6.0 6.2 0.6 127 chr2R 5750435 intergenic not near genes chr2R 5750498 intergenic not near genes chr2R 5750562 intergenic not near genes chr2R_4_5750001 chr2R_5750001 RAL-531 605 chr2R 5772547 5772745 chr2R 5772601 5772878 20 113 4.0 7.5 5.8 2.9 331 chr2R 5772547 3` UTR Gp210 + chr2R 5772712 3` UTR Gp210 + chr2R 5772878 3` UTR Gp210 + chr2R_20_5770001 chr2R_5770001 RAL-531 606 chr2R 5869257 5869306 chr2R 5874353 5874398 flea 13 5095 5.5 3.0 4.2 2.5 5141 chr2R 5869257 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874398 intergenic not near genes chr2R_13_5870001 chr2R_5870001 RAL-531 607 chr2R 5874512 5874550 chr2R 5874605 5874632 11 89 5.0 4.5 4.8 1.9 120 chr2R 5874512 intergenic not near genes chr2R 5874572 intergenic not near genes chr2R 5874632 intergenic not near genes chr2R_11_5870001 chr2R_5870001 RAL-531 608 chr2R 5885346 5885373 chr2R 5885495 5885522 10 149 3.5 1.5 2.5 2.9 176 chr2R 5885346 5` UTR CR44125 + chr2R 5885434 5` UTR CR44125 + chr2R 5885522 5` UTR CR44125 + chr2R_10_5885001 chr2R_5885001 RAL-531 609 chr2R 5902140 5902193 chr2R 5909718 5909770 17.6 7 7575 5.5 5.5 5.5 1.1 7630 chr2R 5902140 intron CG43366 + chr2R 5905955 intron CG43366 + chr2R 5909770 intron CG43366 + chr2R_7_5905001 chr2R_5905001 RAL-531 610 chr2R 5947053 5947081 chr2R 5947192 5947222 17 140 4.0 4.5 4.2 3.3 169 chr2R 5947053 intergenic not near genes chr2R 5947138 intergenic not near genes chr2R 5947222 intergenic not near genes chr2R_17_5945001 chr2R_5945001 RAL-531 611 chr2R 6161302 6161345 chr2R 6161395 6161444 7 98 4.0 5.5 4.8 1.2 142 chr2R 6161302 intron EcR - chr2R 6161373 intron EcR - chr2R 6161444 intron EcR - chr2R_7_6160001 chr2R_6160001 RAL-531 612 chr2R 6178670 6178711 chr2R 6178766 6178818 17 104 4.5 4.0 4.2 3.3 148 chr2R 6178670 intergenic not near genes chr2R 6178744 intergenic not near genes chr2R 6178818 intergenic not near genes chr2R_17_6175001 chr2R_6175001 RAL-531 613 chr2R 6194674 6194696 chr2R 6194777 6194779 7 100 6.0 3.0 4.5 1.3 105 chr2R 6194674 intron Ptr - chr2R 6194726 intron Ptr - chr2R 6194779 intron Ptr - chr2R_7_6190001 chr2R_6190001 RAL-531 614 chr2R 6494524 6494555 chr2R 6499306 6499337 F-element 6 4779 2.0 3.5 2.8 1.6 4813 chr2R 6494524 intergenic not near genes chr2R 6496930 intergenic not near genes chr2R 6499337 intergenic not near genes chr2R_6_6495001 chr2R_6495001 RAL-531 615 chr2R 6579751 6579805 chr2R 6584857 6584910 flea 17 5105 5.5 2.0 3.8 3.5 5159 chr2R 6579751 intron jing + chr2R 6582330 intron jing + chr2R 6584910 intron jing + chr2R_17_6580001 chr2R_6580001 RAL-531 616 chr2R 6594053 6594057 chr2R 6594185 6594213 4 149 0.0 6.5 3.2 1.0 160 chr2R 6594053 intron jing + chr2R 6594133 intron jing + chr2R 6594213 intron jing + chr2R_4_6590001 chr2R_6590001 RAL-531 617 chr2R 6597874 6597899 chr2R 6597967 6597995 8 103 2.5 4.0 3.2 1.9 121 chr2R 6597874 intron jing + chr2R 6597934 intron jing + chr2R 6597995 intron jing + chr2R_8_6595001 chr2R_6595001 RAL-531 618 chr2R 6607908 6607948 chr2R 6608030 6608070 16 119 5.5 4.0 4.8 2.8 162 chr2R 6607908 intron jing + chr2R 6607989 intron jing + chr2R 6608070 intron jing + chr2R_16_6605001 chr2R_6605001 RAL-531 619 chr2R 6685860 6685890 chr2R 6685962 6685992 11 102 5.0 8.0 6.5 1.5 132 chr2R 6685860 intron,intron CG9422 +,Tdc2 - chr2R 6685926 intron,intron CG9422 +,Tdc2 - chr2R 6685992 intron,intron CG9422 +,Tdc2 - chr2R_11_6685001 chr2R_6685001 RAL-531 620 chr2R 6697617 6697648 chr2R 6697728 6697760 8 113 4.5 4.5 4.5 1.5 143 chr2R 6697617 intron Rab2 + chr2R 6697688 intron Rab2 + chr2R 6697760 intron Rab2 + chr2R_8_6695001 chr2R_6695001 RAL-531 621 chr2R 6699557 6699622 chr2R 6699678 6699727 15 115 0.0 4.0 2.0 5.0 170 chr2R 6699557 intergenic Rab2 + chr2R 6699642 intergenic Rab2 + chr2R 6699727 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_15_6695001 chr2R_6695001 RAL-531 622 chr2R 6898299 6898339 chr2R 6898662 6898702 4 354 2.5 5.0 3.8 0.8 403 chr2R 6898299 intron CG30158 + chr2R 6898500 intron CG30158 + chr2R 6898702 intron CG30158 + chr2R_4_6895001 chr2R_6895001 RAL-531 623 chr2R 6952148 6952183 chr2R 6959748 6959783 opus 7 7600 7.0 4.5 5.8 1.0 7635 chr2R 6952148 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959783 intron,intron mim -,CheB42c - chr2R_7_6955001 chr2R_6955001 RAL-531 624 chr2R 7160540 7160586 chr2R 7160638 7160684 12 96 0.5 3.0 1.8 4.3 144 chr2R 7160540 intron pk + chr2R 7160612 intron pk + chr2R 7160684 intron pk + chr2R_12_7160001 chr2R_7160001 RAL-531 625 chr2R 7164251 7164286 chr2R 7164461 7164466 7 200 4.5 4.0 4.2 1.3 215 chr2R 7164251 intron pk + chr2R 7164358 intron pk + chr2R 7164466 intron pk + chr2R_7_7160001 chr2R_7160001 RAL-531 626 chr2R 7196556 7196594 chr2R 7201351 7201389 F-element 25 4795 5.0 6.5 5.8 3.7 4833 chr2R 7196556 intron pk + chr2R 7198972 intron pk + chr2R 7201389 intron pk + chr2R_25_7195001 chr2R_7195001 RAL-531 627 chr2R 7209846 7209861 chr2R 7217599 7217629 roo 8 7766 7.0 7.0 7.0 1.0 7783 chr2R 7209846 intron pk + chr2R 7213738 intron pk + chr2R 7217629 intron pk + chr2R_8_7210001 chr2R_7210001 RAL-531 628 chr2R 7389571 7389593 chr2R 7389693 7389715 4 121 2.5 4.0 3.2 1.0 144 chr2R 7389571 intron CG11107 + chr2R 7389643 intron CG11107 + chr2R 7389715 intron CG11107 + chr2R_4_7385001 chr2R_7385001 RAL-531 629 chr2R 7417890 7418164 chr2R 7417996 7418238 13 96 2.5 6.0 4.2 2.5 348 chr2R 7417890 intergenic not near genes chr2R 7418064 intergenic not near genes chr2R 7418238 intergenic not near genes chr2R_13_7415001 chr2R_7415001 RAL-531 630 chr2R 7434879 7434912 chr2R 7439200 7439233 Juan 6 4321 8.5 6.0 7.2 0.7 4354 chr2R 7434879 intergenic so + chr2R 7437056 intergenic not near genes chr2R 7439233 intergenic not near genes chr2R_6_7435001 chr2R_7435001 RAL-531 631 chr2R 7459260 7459280 chr2R 7459367 7459388 9 108 10.0 6.0 8.0 1.0 128 chr2R 7459260 intergenic Inos -,CG11141 - chr2R 7459324 intergenic CG11141 -,Inos - chr2R 7459388 intergenic CG11141 - chr2R_9_7455001 chr2R_7455001 RAL-531 632 chr2R 7608386 7608414 chr2R 7613609 7613637 I-element 13 5221 11.5 7.5 9.5 1.2 5251 chr2R 7608386 intron CG1358 - chr2R 7611012 intron CG1358 - chr2R 7613637 intron CG1358 - chr2R_13_7610001 chr2R_7610001 RAL-531 633 chr2R 7608421 7608434 chr2R 7613606 7613647 I-element 4 5208 6.0 6.5 6.2 0.6 5226 chr2R 7608421 intron CG1358 - chr2R 7611034 intron CG1358 - chr2R 7613647 intron CG1358 - chr2R_4_7610001 chr2R_7610001 RAL-531 634 chr2R 7691993 7692035 chr2R 7692094 7692136 12 100 4.0 2.5 3.2 2.9 143 chr2R 7691993 intron CG1399 - chr2R 7692064 intron CG1399 - chr2R 7692136 intron CG1399 - chr2R_12_7690001 chr2R_7690001 RAL-531 635 chr2R 7760277 7760306 chr2R 7760424 7760433 7 143 2.5 3.0 2.8 1.8 156 chr2R 7760277 intron,intron CG30497 -,CG45093 - chr2R 7760355 intron,intron CG30497 -,CG45093 - chr2R 7760433 intron,intron CG30497 -,CG45093 - chr2R_7_7760001 chr2R_7760001 RAL-531 636 chr2R 7787067 7787112 chr2R 7787169 7787202 11 101 4.5 1.0 2.8 2.9 135 chr2R 7787067 intron CanB2 + chr2R 7787134 intron CanB2 + chr2R 7787202 intron CanB2 + chr2R_11_7785001 chr2R_7785001 RAL-531 637 chr2R 7815660 7815694 chr2R 7822144 7822183 Burdock 10 6486 3.5 2.0 2.8 2.6 6523 chr2R 7815660 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822183 3` UTR cathD - chr2R_10_7815001 chr2R_7815001 RAL-531 638 chr2R 7862242 7862250 chr2R 7867352 7867380 flea 4 5124 2.0 2.5 2.2 1.2 5138 chr2R 7862242 intron Dgk - chr2R 7864811 intron Dgk - chr2R 7867380 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-531 639 chr2R 7869196 7869210 chr2R 7873987 7874005 Doc 5 4797 6.5 4.0 5.2 0.8 4809 chr2R 7869196 intron Dgk - chr2R 7871600 intron Dgk - chr2R 7874005 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-531 640 chr2R 7885127 7885165 chr2R 7885252 7885301 12 128 2.0 2.5 2.2 3.8 174 chr2R 7885127 intron Dgk - chr2R 7885214 intron Dgk - chr2R 7885301 intron Dgk - chr2R_12_7885001 chr2R_7885001 RAL-531 641 chr2R 7952132 7952161 chr2R 7952421 7952442 13 288 3.0 4.5 3.8 2.7 310 chr2R 7952132 intron CG14764 - chr2R 7952287 intron CG14764 - chr2R 7952442 intron CG14764 - chr2R_13_7950001 chr2R_7950001 RAL-531 642 chr2R 7956070 7956112 chr2R 7956166 7956208 16 93 3.0 8.5 5.8 2.4 138 chr2R 7956070 intergenic CG2906 +,CG14764 - chr2R 7956139 intergenic CG2906 +,CG14764 - chr2R 7956208 5` UTR CG2906 + chr2R_16_7955001 chr2R_7955001 RAL-531 643 chr2R 7982043 7982089 chr2R 7982173 7982183 18 125 6.0 3.0 4.5 3.3 140 chr2R 7982043 intron ACC - chr2R 7982113 intron ACC - chr2R 7982183 intron ACC - chr2R_18_7980001 chr2R_7980001 RAL-531 644 chr2R 8089248 8089287 chr2R 8089353 8089393 15 106 4.5 5.5 5.0 2.5 145 chr2R 8089248 3` UTR sut2 + chr2R 8089320 intergenic sut2 +,sut3 + chr2R 8089393 intergenic sut3 +,sut2 + chr2R_15_8085001 chr2R_8085001 RAL-531 645 chr2R 8209041 8209060 chr2R 8209145 8209149 9 101 4.5 0.0 2.2 2.8 108 chr2R 8209041 intron LRP1 + chr2R 8209095 intron LRP1 + chr2R 8209149 intron LRP1 + chr2R_9_8205001 chr2R_8205001 RAL-531 646 chr2R 8330841 8330890 chr2R 8331347 8331396 roo 9 506 2.0 3.5 2.8 2.4 555 chr2R 8330841 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331396 intron pdm3 + chr2R_9_8330001 chr2R_8330001 RAL-531 647 chr2R 8403426 8403448 chr2R 8403529 8403548 11 102 7.0 5.5 6.2 1.5 122 chr2R 8403426 intron CG2121 - chr2R 8403487 intron CG2121 - chr2R 8403548 intron CG2121 - chr2R_11_8400001 chr2R_8400001 RAL-531 648 chr2R 8406072 8406107 chr2R 8406153 8406202 9 92 1.0 3.0 2.0 3.0 130 chr2R 8406072 intron CG2121 - chr2R 8406137 intron CG2121 - chr2R 8406202 intron CG2121 - chr2R_9_8405001 chr2R_8405001 RAL-531 649 chr2R 8468843 8468880 chr2R 8468978 8468979 5 128 3.5 4.0 3.8 1.0 136 chr2R 8468843 3` UTR Mal-A7 - chr2R 8468911 3` UTR Mal-A7 - chr2R 8468979 3` UTR Mal-A7 - chr2R_5_8465001 chr2R_8465001 RAL-531 650 chr2R 8483943 8483992 chr2R 8484039 8484048 13 87 5.5 2.0 3.8 2.7 105 chr2R 8483943 intron mtt - chr2R 8483996 intron mtt - chr2R 8484048 intron mtt - chr2R_13_8480001 chr2R_8480001 RAL-531 651 chr2R 8489743 8489756 chr2R 8489812 8489855 9 89 4.0 5.5 4.8 1.6 112 chr2R 8489743 intron mtt - chr2R 8489799 intron mtt - chr2R 8489855 intron mtt - chr2R_9_8485001 chr2R_8485001 RAL-531 652 chr2R 8524053 8524102 chr2R 8524150 8524194 17 96 3.0 3.0 3.0 4.2 141 chr2R 8524053 intron mtt - chr2R 8524124 intron mtt - chr2R 8524194 intron mtt - chr2R_17_8520001 chr2R_8520001 RAL-531 653 chr2R 8525088 8525111 chr2R 8525185 8525208 9 96 3.5 3.0 3.2 2.1 120 chr2R 8525088 intron mtt - chr2R 8525148 intron mtt - chr2R 8525208 intron mtt - chr2R_9_8525001 chr2R_8525001 RAL-531 654 chr2R 8612565 8612610 chr2R 8612662 8612707 16 96 6.5 6.0 6.2 2.2 142 chr2R 8612565 intron CG8642 - chr2R 8612636 intron CG8642 - chr2R 8612707 intron CG8642 - chr2R_16_8610001 chr2R_8610001 RAL-531 655 chr2R 8615769 8615808 chr2R 8615892 8615919 11 127 7.5 3.5 5.5 1.7 150 chr2R 8615769 intron Cirl + chr2R 8615844 intron Cirl + chr2R 8615919 5` UTR Cirl + chr2R_11_8615001 chr2R_8615001 RAL-531 656 chr2R 8635908 8635932 chr2R 8636006 8636029 9 95 0.0 3.5 1.8 3.2 121 chr2R 8635908 intergenic not near genes chr2R 8635968 intergenic not near genes chr2R 8636029 intergenic not near genes chr2R_9_8635001 chr2R_8635001 RAL-531 657 chr2R 8722778 8722794 chr2R 8723004 8723040 pogo 7 241 3.5 0.5 2.0 2.3 262 chr2R 8722778 intron CG14767 - chr2R 8722909 intron CG14767 - chr2R 8723040 intron CG14767 - chr2R_7_8720001 chr2R_8720001 RAL-531 658 chr2R 8755171 8755218 chr2R 8755654 8755675 10 469 2.5 4.0 3.2 2.4 504 chr2R 8755171 intron CG8740 + chr2R 8755423 intron CG8740 + chr2R 8755675 intron CG8740 + chr2R_10_8755001 chr2R_8755001 RAL-531 659 chr2R 8833422 8833445 chr2R 8833512 8833535 6 95 1.5 0.5 1.0 3.0 113 chr2R 8833422 intron sns + chr2R 8833478 intron sns + chr2R 8833535 intron sns + chr2R_6_8830001 chr2R_8830001 RAL-531 660 chr2R 8976180 8976223 chr2R 8976289 8976332 15 108 3.0 4.0 3.5 3.3 152 chr2R 8976180 intron CG8213 - chr2R 8976256 intron CG8213 - chr2R 8976332 intron CG8213 - chr2R_15_8975001 chr2R_8975001 RAL-531 661 chr2R 9026816 9026853 chr2R 9026956 9026988 16 140 5.5 6.5 6.0 2.3 172 chr2R 9026816 intron CG8170 - chr2R 9026902 intron CG8170 - chr2R 9026988 intron CG8170 - chr2R_16_9025001 chr2R_9025001 RAL-531 662 chr2R 9047401 9047435 chr2R 9047516 9047517 16 112 4.0 2.5 3.2 3.8 116 chr2R 9047401 intron CG13743 - chr2R 9047459 intron CG13743 - chr2R 9047517 intron CG13743 - chr2R_16_9045001 chr2R_9045001 RAL-531 663 chr2R 9076116 9076168 chr2R 9076212 9076264 16 95 5.0 5.5 5.2 2.6 148 chr2R 9076116 intron ana + chr2R 9076190 intron ana + chr2R 9076264 intron ana + chr2R_16_9075001 chr2R_9075001 RAL-531 664 chr2R 9078461 9078489 chr2R 9078559 9078585 7 97 7.0 5.0 6.0 1.0 124 chr2R 9078461 intergenic CG8083 + chr2R 9078523 intergenic CG8083 + chr2R 9078585 intergenic CG8083 + chr2R_7_9075001 chr2R_9075001 RAL-531 665 chr2R 9132081 9132135 chr2R 9132178 9132232 20 95 6.0 4.0 5.0 3.3 151 chr2R 9132081 intergenic CG18659 -,Hydr1 + chr2R 9132156 intergenic CG18659 -,Hydr1 + chr2R 9132232 intergenic CG18659 -,Hydr1 + chr2R_20_9130001 chr2R_9130001 RAL-531 666 chr2R 9151284 9151333 chr2R 9157774 9157823 Burdock 14 6490 4.5 7.5 6.0 2.0 6539 chr2R 9151284 exon CG30345 + chr2R 9154554 intergenic not near genes chr2R 9157823 intergenic CG8008 - chr2R_14_9150001 chr2R_9150001 RAL-531 667 chr2R 9162887 9162903 chr2R 9163297 9163316 7 413 6.5 2.5 4.5 1.3 429 chr2R 9162887 exon CG8046 - chr2R 9163102 exon CG8046 - chr2R 9163316 intron CG8046 - chr2R_7_9160001 chr2R_9160001 RAL-531 668 chr2R 9267957 9268009 chr2R 9268063 9268115 21 101 3.0 2.5 2.8 5.5 158 chr2R 9267957 exon Pkn - chr2R 9268036 intron Pkn - chr2R 9268115 intron Pkn - chr2R_21_9265001 chr2R_9265001 RAL-531 669 chr2R 9368125 9368149 chr2R 9368209 9368220 7 84 1.0 0.0 0.5 4.7 95 chr2R 9368125 intron CG13954 - chr2R 9368172 intron CG13954 - chr2R 9368220 intron CG13954 - chr2R_7_9365001 chr2R_9365001 RAL-531 670 chr2R 9378094 9378141 chr2R 9378196 9378243 8 94 2.0 3.5 2.8 2.1 149 chr2R 9378094 intron CG13954 - chr2R 9378168 intron CG13954 - chr2R 9378243 intron CG13954 - chr2R_8_9375001 chr2R_9375001 RAL-531 671 chr2R 9480054 9480104 chr2R 9490605 9490655 roo 11 10551 5.0 9.0 7.0 1.4 10601 chr2R 9480054 intergenic not near genes chr2R 9485354 intergenic not near genes chr2R 9490655 intergenic not near genes chr2R_11_9485001 chr2R_9485001 RAL-531 672 chr2R 9541613 9541647 chr2R 9541708 9541714 8 89 0.0 5.5 2.8 2.1 101 chr2R 9541613 intergenic brp +,CG1888 - chr2R 9541664 intergenic brp +,CG1888 - chr2R 9541714 intergenic brp +,CG1888 - chr2R_8_9540001 chr2R_9540001 RAL-531 673 chr2R 9561828 9561843 chr2R 9561936 9561951 10 107 0.0 0.5 0.2 8.3 123 chr2R 9561828 3` UTR,intron CR45281 -,CG1809 + chr2R 9561890 3` UTR,intron CR45281 -,CG1809 + chr2R 9561951 3` UTR,intron CR45281 -,CG1809 + chr2R_10_9560001 chr2R_9560001 RAL-531 674 chr2R 9726597 9726642 chr2R 9734170 9734215 17.6 23 7573 4.0 4.5 4.2 4.4 7618 chr2R 9726597 intron sqa - chr2R 9730406 intron sqa - chr2R 9734215 intron sqa - chr2R_23_9730001 chr2R_9730001 RAL-531 675 chr2R 9784121 9784141 chr2R 9784232 9784249 9 110 5.0 7.5 6.2 1.2 128 chr2R 9784121 intron CG1688 - chr2R 9784185 intron CG1688 - chr2R 9784249 intron CG1688 - chr2R_9_9780001 chr2R_9780001 RAL-531 676 chr2R 9862751 9862789 chr2R 9862834 9862868 9 89 3.5 4.5 4.0 1.8 117 chr2R 9862751 intergenic not near genes chr2R 9862810 intergenic not near genes chr2R 9862868 intergenic not near genes chr2R_9_9860001 chr2R_9860001 RAL-531 677 chr2R 9945418 9945466 chr2R 9945634 9945682 BS 9 212 2.0 3.0 2.5 2.6 264 chr2R 9945418 intron Mef2 - chr2R 9945550 intron Mef2 - chr2R 9945682 intron Mef2 - chr2R_9_9945001 chr2R_9945001 RAL-531 678 chr2R 10001512 10001524 chr2R 10001608 10001627 5 100 7.5 3.5 5.5 0.8 115 chr2R 10001512 intron Pka-R2 - chr2R 10001570 intron Pka-R2 - chr2R 10001627 intron Pka-R2 - chr2R_5_10000001 chr2R_10000001 RAL-531 679 chr2R 10001526 10001547 chr2R 10001606 10001646 11 96 2.5 3.0 2.8 2.9 120 chr2R 10001526 intron Pka-R2 - chr2R 10001586 intron Pka-R2 - chr2R 10001646 intron Pka-R2 - chr2R_11_10000001 chr2R_10000001 RAL-531 680 chr2R 10005541 10005582 chr2R 10005656 10005687 19 115 5.0 3.0 4.0 3.8 146 chr2R 10005541 intron Pka-R2 - chr2R 10005614 intron Pka-R2 - chr2R 10005687 intron Pka-R2 - chr2R_19_10005001 chr2R_10005001 RAL-531 681 chr2R 10005841 10005877 chr2R 10007013 10007033 1360 7 1165 5.0 3.5 4.2 1.3 1192 chr2R 10005841 intron Pka-R2 - chr2R 10006437 intron Pka-R2 - chr2R 10007033 intron Pka-R2 - chr2R_7_10005001 chr2R_10005001 RAL-531 682 chr2R 10047796 10047834 chr2R 10047899 10047937 19 103 4.0 6.5 5.2 3.1 141 chr2R 10047796 intron oys - chr2R 10047866 intron oys - chr2R 10047937 intron oys - chr2R_19_10045001 chr2R_10045001 RAL-531 683 chr2R 10051317 10051365 chr2R 10051412 10051450 16 91 5.0 3.5 4.2 3.1 133 chr2R 10051317 exon sel - chr2R 10051384 intron sel - chr2R 10051450 intron sel - chr2R_16_10050001 chr2R_10050001 RAL-531 684 chr2R 10087283 10087320 chr2R 10087379 10087416 8 96 2.0 0.0 1.0 4.0 133 chr2R 10087283 intron CG2269 + chr2R 10087350 intron CG2269 + chr2R 10087416 intron CG2269 + chr2R_8_10085001 chr2R_10085001 RAL-531 685 chr2R 10089653 10089702 chr2R 10089932 10089964 10 272 2.5 3.0 2.8 2.6 311 chr2R 10089653 intron CG2269 + chr2R 10089808 intron CG2269 + chr2R 10089964 intron CG2269 + chr2R_10_10085001 chr2R_10085001 RAL-531 686 chr2R 10122721 10122739 chr2R 10122951 10122969 9 229 7.5 6.5 7.0 1.1 248 chr2R 10122721 intergenic Ccs - chr2R 10122845 intergenic Ccs - chr2R 10122969 intergenic Ccs - chr2R_9_10120001 chr2R_10120001 RAL-531 687 chr2R 10129675 10129713 chr2R 10130082 10130095 4 390 1.0 2.5 1.8 1.4 420 chr2R 10129675 intron gem + chr2R 10129885 intron gem + chr2R 10130095 intron gem + chr2R_4_10125001 chr2R_10125001 RAL-531 688 chr2R 10171099 10171143 chr2R 10171203 10171247 19 103 2.0 4.5 3.2 4.5 148 chr2R 10171099 intron KCNQ - chr2R 10171173 intron KCNQ - chr2R 10171247 intron KCNQ - chr2R_19_10170001 chr2R_10170001 RAL-531 689 chr2R 10176864 10176903 chr2R 10186051 10186088 roo 18 9185 5.0 4.0 4.5 3.3 9224 chr2R 10176864 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186088 intron KCNQ - chr2R_18_10180001 chr2R_10180001 RAL-531 690 chr2R 10186094 10186126 chr2R 10186190 10186222 12 96 4.0 6.0 5.0 2.0 128 chr2R 10186094 intron KCNQ - chr2R 10186158 intron KCNQ - chr2R 10186222 intron KCNQ - chr2R_12_10185001 chr2R_10185001 RAL-531 691 chr2R 10203621 10203656 chr2R 10203726 10203761 7 103 4.0 0.0 2.0 2.3 140 chr2R 10203621 intergenic not near genes chr2R 10203691 intergenic not near genes chr2R 10203761 intergenic not near genes chr2R_7_10200001 chr2R_10200001 RAL-531 692 chr2R 10307063 10307097 chr2R 10307159 10307193 20 95 10.0 6.0 8.0 2.2 130 chr2R 10307063 3` UTR JhI-1 - chr2R 10307128 3` UTR JhI-1 - chr2R 10307193 3` UTR JhI-1 - chr2R_20_10305001 chr2R_10305001 RAL-531 693 chr2R 10313298 10313351 chr2R 10313403 10313459 17 103 2.5 7.5 5.0 2.8 161 chr2R 10313298 intergenic not near genes chr2R 10313378 intergenic not near genes chr2R 10313459 intergenic Ndg + chr2R_17_10310001 chr2R_10310001 RAL-531 694 chr2R 10319700 10319734 chr2R 10319812 10319846 8 112 1.5 1.5 1.5 3.2 146 chr2R 10319700 intron Ndg + chr2R 10319773 intron Ndg + chr2R 10319846 intron,3` UTR Ndg +,CG34222 - chr2R_8_10315001 chr2R_10315001 RAL-531 695 chr2R 10322062 10322080 chr2R 10322158 10322177 7 100 6.5 0.5 3.5 1.6 115 chr2R 10322062 3` UTR Ndg + chr2R 10322120 intergenic Ndg + chr2R 10322177 intergenic Ndg + chr2R_7_10320001 chr2R_10320001 RAL-531 696 chr2R 10370489 10370524 chr2R 10370652 10370687 13 163 4.0 1.5 2.8 3.4 198 chr2R 10370489 intron CG42732 - chr2R 10370588 intron CG42732 - chr2R 10370687 intron CG42732 - chr2R_13_10370001 chr2R_10370001 RAL-531 697 chr2R 10469001 10469048 chr2R 10469147 10469194 12 146 2.0 2.0 2.0 4.0 193 chr2R 10469001 intron CG11777 + chr2R 10469098 intron CG11777 + chr2R 10469194 intron CG11777 + chr2R_12_10465001 chr2R_10465001 RAL-531 698 chr2R 10538749 10538790 chr2R 10538919 10538959 11 167 7.0 4.0 5.5 1.7 210 chr2R 10538749 intron lola - chr2R 10538854 intron lola - chr2R 10538959 intron lola - chr2R_11_10535001 chr2R_10535001 RAL-531 699 chr2R 10551041 10551180 chr2R 10551152 10551319 8 121 0.0 0.0 0.0 8.0 278 chr2R 10551041 intergenic not near genes chr2R 10551180 intergenic not near genes chr2R 10551319 intergenic not near genes chr2R_8_10550001 chr2R_10550001 RAL-531 700 chr2R 10574629 10574635 chr2R 10574731 10574735 4 102 5.5 10.5 8.0 0.4 106 chr2R 10574629 intron psq + chr2R 10574682 intron psq + chr2R 10574735 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-531 701 chr2R 10622340 10622349 chr2R 10637125 10637134 mdg1 6 14785 8.0 8.5 8.2 0.7 14794 chr2R 10622340 intron CG11883 + chr2R 10629737 intron CG11883 + chr2R 10637134 intron CG11883 + chr2R_6_10625001 chr2R_10625001 RAL-531 702 chr2R 10644041 10644088 chr2R 10644139 10644166 19 97 4.0 0.0 2.0 6.3 125 chr2R 10644041 intron Git - chr2R 10644104 intron Git - chr2R 10644166 intron Git - chr2R_19_10640001 chr2R_10640001 RAL-531 703 chr2R 10672719 10672829 chr2R 10672826 10672974 6 137 0.0 0.0 0.0 6.0 255 chr2R 10672719 intergenic not near genes chr2R 10672846 intergenic stan + chr2R 10672974 intergenic stan + chr2R_6_10670001 chr2R_10670001 RAL-531 704 chr2R 10686363 10686404 chr2R 10686460 10686501 4 95 2.0 2.5 2.2 1.2 138 chr2R 10686363 intron stan + chr2R 10686432 intron stan + chr2R 10686501 intron stan + chr2R_4_10685001 chr2R_10685001 RAL-531 705 chr2R 10761540 10761590 chr2R 10761714 10761751 16 173 4.0 2.0 3.0 4.0 211 chr2R 10761540 intron,5` UTR CG33144 -,CR43605 + chr2R 10761646 intron,5` UTR CG33144 -,CR43605 + chr2R 10761751 intron CG33144 - chr2R_16_10760001 chr2R_10760001 RAL-531 706 chr2R 10781618 10781628 chr2R 10781714 10781724 6 96 3.5 2.5 3.0 1.5 106 chr2R 10781618 intron CG33144 - chr2R 10781671 intron CG33144 - chr2R 10781724 intron CG33144 - chr2R_6_10780001 chr2R_10780001 RAL-531 707 chr2R 10852256 10852302 chr2R 10852399 10852433 9 140 1.0 2.0 1.5 3.6 177 chr2R 10852256 intron CG30015 - chr2R 10852344 intron CG30015 - chr2R 10852433 intron CG30015 - chr2R_9_10850001 chr2R_10850001 RAL-531 708 chr2R 10860582 10860589 chr2R 10860678 10860685 4 96 0.0 0.0 0.0 4.0 103 chr2R 10860582 intron CG30015 - chr2R 10860634 intron CG30015 - chr2R 10860685 intron CG30015 - chr2R_4_10860001 chr2R_10860001 RAL-531 709 chr2R 10922764 10922791 chr2R 10922870 10922897 7 105 0.0 7.0 3.5 1.6 133 chr2R 10922764 intergenic not near genes chr2R 10922830 intergenic not near genes chr2R 10922897 intergenic not near genes chr2R_7_10920001 chr2R_10920001 RAL-531 710 chr2R 10941706 10941734 chr2R 10941826 10941836 5 115 6.5 0.0 3.2 1.2 130 chr2R 10941706 5` UTR Spn47C - chr2R 10941771 intergenic Spn47C - chr2R 10941836 intergenic Spn47C - chr2R_5_10940001 chr2R_10940001 RAL-531 711 chr2R 10947074 10947125 chr2R 10947181 10947223 4 102 5.0 0.0 2.5 1.1 149 chr2R 10947074 5` UTR CR45228 + chr2R 10947148 intergenic CR45228 + chr2R 10947223 intergenic CR45228 + chr2R_4_10945001 chr2R_10945001 RAL-531 712 chr2R 10987205 10987237 chr2R 10987508 10987539 10 297 1.0 0.5 0.8 5.6 334 chr2R 10987205 intron luna - chr2R 10987372 intron luna - chr2R 10987539 intron luna - chr2R_10_10985001 chr2R_10985001 RAL-531 713 chr2R 11009797 11009844 chr2R 11018991 11019003 roo 5 9185 4.0 4.0 4.0 1.0 9206 chr2R 11009797 intron luna - chr2R 11014400 intron luna - chr2R 11019003 intron luna - chr2R_5_11010001 chr2R_11010001 RAL-531 714 chr2R 11155822 11155845 chr2R 11155946 11155954 7 121 10.0 6.5 8.2 0.8 132 chr2R 11155822 intron CG13229 - chr2R 11155888 intron CG13229 - chr2R 11155954 intron CG13229 - chr2R_7_11155001 chr2R_11155001 RAL-531 715 chr2R 11161644 11161650 chr2R 11161803 11161810 4 159 9.0 6.0 7.5 0.5 166 chr2R 11161644 intron,intron CG13229 -,shn + chr2R 11161727 intron,intron CG13229 -,shn + chr2R 11161810 intron,intron CG13229 -,shn + chr2R_4_11160001 chr2R_11160001 RAL-531 716 chr2R 11161651 11161658 chr2R 11161801 11161818 6 157 7.5 6.0 6.8 0.8 167 chr2R 11161651 intron,intron CG13229 -,shn + chr2R 11161734 intron,intron CG13229 -,shn + chr2R 11161818 intron,intron CG13229 -,shn + chr2R_6_11160001 chr2R_11160001 RAL-531 717 chr2R 11179248 11179289 chr2R 11179354 11179373 13 103 7.0 4.0 5.5 2.0 125 chr2R 11179248 intron shn + chr2R 11179310 intron shn + chr2R 11179373 intron shn + chr2R_13_11175001 chr2R_11175001 RAL-531 718 chr2R 11207803 11207845 chr2R 11208007 11208035 BS 11 204 5.5 6.5 6.0 1.6 232 chr2R 11207803 intron shn + chr2R 11207919 intron shn + chr2R 11208035 intron shn + chr2R_11_11205001 chr2R_11205001 RAL-531 719 chr2R 11249154 11249190 chr2R 11249300 11249310 5 139 7.0 0.0 3.5 1.1 156 chr2R 11249154 intergenic CG43112 + chr2R 11249232 intergenic CG43112 + chr2R 11249310 intergenic CG43112 + chr2R_5_11245001 chr2R_11245001 RAL-531 720 chr2R 11260499 11260539 chr2R 11260625 11260646 7 120 2.5 0.5 1.5 2.8 147 chr2R 11260499 intergenic not near genes chr2R 11260572 intergenic not near genes chr2R 11260646 intergenic Cpr47Ed - chr2R_7_11260001 chr2R_11260001 RAL-531 721 chr2R 11263835 11263842 chr2R 11263965 11263978 4 134 0.0 10.5 5.2 0.6 143 chr2R 11263835 intergenic not near genes chr2R 11263906 intergenic not near genes chr2R 11263978 intergenic not near genes chr2R_4_11260001 chr2R_11260001 RAL-531 722 chr2R 11336566 11336612 chr2R 11336663 11336704 15 94 6.5 4.0 5.2 2.4 138 chr2R 11336566 intergenic sha +,lambdaTry + chr2R 11336635 intergenic sha +,lambdaTry + chr2R 11336704 intergenic lambdaTry +,sha + chr2R_15_11335001 chr2R_11335001 RAL-531 723 chr2R 11344150 11344159 chr2R 11344251 11344275 4 111 0.0 3.5 1.8 1.4 125 chr2R 11344150 intergenic alphaTry - chr2R 11344212 intergenic alphaTry - chr2R 11344275 3` UTR alphaTry - chr2R_4_11340001 chr2R_11340001 RAL-531 724 chr2R 11368020 11368056 chr2R 11368115 11368152 8 95 0.5 3.0 1.8 2.9 132 chr2R 11368020 intron CG13204 + chr2R 11368086 intron CG13204 + chr2R 11368152 intron CG13204 + chr2R_8_11365001 chr2R_11365001 RAL-531 725 chr2R 11415549 11415551 chr2R 11418667 11418697 opus 6 3146 1.5 5.0 3.2 1.4 3148 chr2R 11415549 intron Drip - chr2R 11417123 intron Drip - chr2R 11418697 intron Drip - chr2R_6_11415001 chr2R_11415001 RAL-531 726 chr2R 11419858 11419897 chr2R 11419993 11420026 11 139 0.5 3.0 1.8 3.9 168 chr2R 11419858 intron Drip - chr2R 11419942 intron Drip - chr2R 11420026 intron Drip - chr2R_11_11415001 chr2R_11415001 RAL-531 727 chr2R 11472627 11472670 chr2R 11473844 11473887 pogo 7 1211 5.0 2.0 3.5 1.6 1260 chr2R 11472627 intergenic not near genes chr2R 11473257 intergenic not near genes chr2R 11473887 intergenic not near genes chr2R_7_11470001 chr2R_11470001 RAL-531 728 chr2R 11485114 11485145 chr2R 11485197 11485247 5 91 1.5 6.0 3.8 1.0 133 chr2R 11485114 intron inv + chr2R 11485180 intron inv + chr2R 11485247 intron inv + chr2R_5_11485001 chr2R_11485001 RAL-531 729 chr2R 11555379 11555425 chr2R 11555733 11555780 14 352 0.5 1.5 1.0 7.0 401 chr2R 11555379 intergenic not near genes chr2R 11555580 intergenic not near genes chr2R 11555780 intergenic not near genes chr2R_14_11555001 chr2R_11555001 RAL-531 730 chr2R 11463556 11463556 chr2R 11557706 11557713 4 94155 20.5 10.5 15.5 0.2 94157 chr2R 11463556 3` UTR E(Pc) + chr2R 11510634 intergenic not near genes chr2R 11557713 intergenic not near genes chr2R_4_11510001 chr2R_11510001 RAL-531 731 chr2R 11568681 11568733 chr2R 11568811 11568863 5 130 1.5 1.0 1.2 2.3 182 chr2R 11568681 intergenic not near genes chr2R 11568772 intergenic not near genes chr2R 11568863 intergenic not near genes chr2R_5_11565001 chr2R_11565001 RAL-531 732 chr2R 11660346 11660394 chr2R 11660483 11660494 8 132 1.5 1.5 1.5 3.2 148 chr2R 11660346 intron Roc2 - chr2R 11660420 intron Roc2 - chr2R 11660494 intron Roc2 - chr2R_8_11660001 chr2R_11660001 RAL-531 733 chr2R 11662044 11662061 chr2R 11662111 11662126 4 75 2.0 3.0 2.5 1.1 82 chr2R 11662044 intron Roc2 - chr2R 11662085 intron Roc2 - chr2R 11662126 intron Roc2 - chr2R_4_11660001 chr2R_11660001 RAL-531 734 chr2R 11667376 11667399 chr2R 11667482 11667513 6 113 8.0 4.5 6.2 0.8 137 chr2R 11667376 intron,intron Roc2 -,Tret1-1 + chr2R 11667444 intron,intron Roc2 -,Tret1-1 + chr2R 11667513 intron,intron Roc2 -,Tret1-1 + chr2R_6_11665001 chr2R_11665001 RAL-531 735 chr2R 11724138 11724185 chr2R 11724241 11724293 10 105 4.0 1.5 2.8 2.6 155 chr2R 11724138 intron pyr + chr2R 11724216 intron pyr + chr2R 11724293 intron pyr + chr2R_10_11720001 chr2R_11720001 RAL-531 736 chr2R 11861981 11862019 chr2R 11862079 11862124 19 105 6.5 5.0 5.8 2.8 143 chr2R 11861981 3` UTR CG34230 + chr2R 11862052 intergenic CG34230 +,TwdlBeta - chr2R 11862124 intergenic CG34230 +,TwdlBeta - chr2R_19_11860001 chr2R_11860001 RAL-531 737 chr2R 12010310 12010330 chr2R 12010435 12010455 5 125 2.0 7.0 4.5 0.9 145 chr2R 12010310 intron otk - chr2R 12010382 intron otk - chr2R 12010455 intron otk - chr2R_5_12010001 chr2R_12010001 RAL-531 738 chr2R 12120423 12120435 chr2R 12120486 12120497 4 68 3.5 0.0 1.8 1.4 74 chr2R 12120423 intergenic not near genes chr2R 12120460 intergenic not near genes chr2R 12120497 intergenic not near genes chr2R_4_12120001 chr2R_12120001 RAL-531 739 chr2R 12124811 12124857 chr2R 12124915 12124950 12 100 1.5 1.5 1.5 4.8 139 chr2R 12124811 intergenic not near genes chr2R 12124880 intergenic not near genes chr2R 12124950 intergenic not near genes chr2R_12_12120001 chr2R_12120001 RAL-531 740 chr2R 12185983 12186037 chr2R 12186098 12186152 33 113 7.0 7.5 7.2 4.0 169 chr2R 12185983 intron Cyp6g1 + chr2R 12186068 intron Cyp6g1 + chr2R 12186152 intron Cyp6g1 + chr2R_33_12185001 chr2R_12185001 RAL-531 741 chr2R 12187473 12187475 chr2R 12190083 12190122 9 2622 22.0 26.5 24.2 0.4 2649 chr2R 12187473 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_9_12185001 chr2R_12185001 RAL-531 742 chr2R 12217569 12217596 chr2R 12217665 12217673 8 91 0.0 5.0 2.5 2.3 104 chr2R 12217569 intergenic not near genes chr2R 12217621 intergenic not near genes chr2R 12217673 intergenic not near genes chr2R_8_12215001 chr2R_12215001 RAL-531 743 chr2R 12320710 12320721 chr2R 12320986 12320992 5 277 6.0 3.5 4.8 0.9 282 chr2R 12320710 3` UTR CR44316 - chr2R 12320851 intron CR44316 - chr2R 12320992 intergenic CR44316 -,CG13163 + chr2R_5_12320001 chr2R_12320001 RAL-531 744 chr2R 12334869 12334894 chr2R 12334967 12334982 7 96 6.0 2.0 4.0 1.4 113 chr2R 12334869 intergenic CG8490 + chr2R 12334926 intergenic CG8490 + chr2R 12334982 intergenic CG8490 + chr2R_7_12330001 chr2R_12330001 RAL-531 745 chr2R 12363362 12363408 chr2R 12363814 12363860 9 452 5.5 2.0 3.8 1.9 498 chr2R 12363362 intergenic CG30043 + chr2R 12363611 intergenic CG30043 + chr2R 12363860 intergenic not near genes chr2R_9_12360001 chr2R_12360001 RAL-531 746 chr2R 12504132 12504142 chr2R 12504226 12504238 4 94 9.0 4.0 6.5 0.5 106 chr2R 12504132 intron fdl - chr2R 12504185 intron fdl - chr2R 12504238 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-531 747 chr2R 12504146 12504177 chr2R 12504223 12504249 4 82 6.0 3.5 4.8 0.7 103 chr2R 12504146 intron fdl - chr2R 12504198 intron fdl - chr2R 12504249 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-531 748 chr2R 12527270 12527303 chr2R 12527499 12527532 4 229 2.5 6.0 4.2 0.8 262 chr2R 12527270 intergenic not near genes chr2R 12527401 intergenic not near genes chr2R 12527532 intergenic not near genes chr2R_4_12525001 chr2R_12525001 RAL-531 749 chr2R 12565547 12565593 chr2R 12565945 12565961 10 380 0.0 8.5 4.2 1.9 414 chr2R 12565547 intergenic not near genes chr2R 12565754 intergenic Cyp301a1 + chr2R 12565961 intergenic Cyp301a1 + chr2R_10_12565001 chr2R_12565001 RAL-531 750 chr2R 12670566 12670610 chr2R 12670671 12670715 7 105 0.0 4.0 2.0 2.3 149 chr2R 12670566 3` UTR CG42708 - chr2R 12670640 3` UTR CG42708 - chr2R 12670715 3` UTR CG42708 - chr2R_7_12670001 chr2R_12670001 RAL-531 751 chr2R 12707497 12707547 chr2R 12715883 12715933 roo 23 8386 5.5 3.5 4.5 4.2 8436 chr2R 12707497 intron CG42663 + chr2R 12711715 intron CG42663 + chr2R 12715933 intron CG42663 + chr2R_23_12710001 chr2R_12710001 RAL-531 752 chr2R 12777777 12777821 chr2R 12777906 12777950 10 129 4.5 6.5 5.5 1.5 173 chr2R 12777777 5` UTR CR45266 + chr2R 12777864 5` UTR CR45266 + chr2R 12777950 5` UTR CR45266 + chr2R_10_12775001 chr2R_12775001 RAL-531 753 chr2R 12789303 12789311 chr2R 12797662 12797664 roo 4 8360 2.0 3.0 2.5 1.1 8361 chr2R 12789303 intron,3` UTR sca +,CR45137 - chr2R 12793484 intron,intron sca +,CR45137 - chr2R 12797664 intron,3` UTR sca +,CR45137 - chr2R_4_12790001 chr2R_12790001 RAL-531 754 chr2R 12819460 12819478 chr2R 12824536 12824567 jockey 5 5082 1.5 2.0 1.8 1.8 5107 chr2R 12819460 intergenic not near genes chr2R 12822014 intergenic not near genes chr2R 12824567 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-531 755 chr2R 12836368 12836418 chr2R 12836475 12836524 10 103 4.5 5.5 5.0 1.7 156 chr2R 12836368 intergenic not near genes chr2R 12836446 intergenic not near genes chr2R 12836524 intergenic not near genes chr2R_10_12835001 chr2R_12835001 RAL-531 756 chr2R 12897458 12897474 chr2R 12897564 12897582 6 110 0.0 0.0 0.0 6.0 124 chr2R 12897458 intron vg + chr2R 12897520 intron vg + chr2R 12897582 intron vg + chr2R_6_12895001 chr2R_12895001 RAL-531 757 chr2R 12973411 12973436 chr2R 12973518 12973536 6 102 3.0 3.5 3.2 1.4 125 chr2R 12973411 intron Psc - chr2R 12973474 intron Psc - chr2R 12973536 intron Psc - chr2R_6_12970001 chr2R_12970001 RAL-531 758 chr2R 13043032 13043039 chr2R 13043132 13043139 8 100 0.0 5.0 2.5 2.3 107 chr2R 13043032 intergenic not near genes chr2R 13043086 intergenic not near genes chr2R 13043139 intergenic not near genes chr2R_8_13040001 chr2R_13040001 RAL-531 759 chr2R 13061349 13061372 chr2R 13061429 13061473 4 96 0.5 3.5 2.0 1.3 124 chr2R 13061349 intron Drl-2 - chr2R 13061411 intron Drl-2 - chr2R 13061473 intron Drl-2 - chr2R_4_13060001 chr2R_13060001 RAL-531 760 chr2R 13136833 13136864 chr2R 13141644 13141680 Doc 4 4816 3.0 1.5 2.2 1.2 4847 chr2R 13136833 exon Cap-G + chr2R 13139256 intron Cap-G + chr2R 13141680 intron Cap-G + chr2R_4_13135001 chr2R_13135001 RAL-531 761 chr2R 13167409 13167454 chr2R 13167523 13167558 18 112 5.5 0.0 2.8 4.7 149 chr2R 13167409 intron GLaz - chr2R 13167484 intron GLaz - chr2R 13167558 intron GLaz - chr2R_18_13165001 chr2R_13165001 RAL-531 762 chr2R 13431471 13431504 chr2R 13431570 13431603 16 99 4.0 0.0 2.0 5.3 132 chr2R 13431471 intron CG42321 - chr2R 13431537 intron CG42321 - chr2R 13431603 intron CG42321 - chr2R_16_13430001 chr2R_13430001 RAL-531 763 chr2R 13439091 13439139 chr2R 13439226 13439273 7 133 2.5 1.0 1.8 2.5 182 chr2R 13439091 intergenic CG42321 -,cnn - chr2R 13439182 intergenic CG42321 -,cnn - chr2R 13439273 intergenic cnn -,CG42321 - chr2R_7_13435001 chr2R_13435001 RAL-531 764 chr2R 13529162 13529217 chr2R 13529398 13529453 15 229 3.5 3.5 3.5 3.3 291 chr2R 13529162 intron Vmat - chr2R 13529308 intron Vmat - chr2R 13529453 intron Vmat - chr2R_15_13525001 chr2R_13525001 RAL-531 765 chr2R 13532497 13532536 chr2R 13532633 13532672 11 135 3.0 3.5 3.2 2.6 175 chr2R 13532497 intron Vmat - chr2R 13532584 intron Vmat - chr2R 13532672 intron Vmat - chr2R_11_13530001 chr2R_13530001 RAL-531 766 chr2R 13544541 13544594 chr2R 13544637 13544683 10 87 0.5 2.5 1.5 4.0 142 chr2R 13544541 intron CG6145 - chr2R 13544612 intron CG6145 - chr2R 13544683 intron CG6145 - chr2R_10_13540001 chr2R_13540001 RAL-531 767 chr2R 13566239 13566278 chr2R 13566339 13566378 19 98 4.5 1.0 2.8 5.0 139 chr2R 13566239 intergenic not near genes chr2R 13566308 intergenic not near genes chr2R 13566378 intergenic not near genes chr2R_19_13565001 chr2R_13565001 RAL-531 768 chr2R 13580492 13580515 chr2R 13580852 13580885 jockey 4 368 0.0 1.0 0.5 2.7 393 chr2R 13580492 3` UTR CG6191 - chr2R 13580688 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580885 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 RAL-531 769 chr2R 13602653 13602674 chr2R 13602747 13602773 6 96 4.0 6.0 5.0 1.0 120 chr2R 13602653 intergenic not near genes chr2R 13602713 intergenic not near genes chr2R 13602773 intergenic not near genes chr2R_6_13600001 chr2R_13600001 RAL-531 770 chr2R 13851871 13851912 chr2R 13851965 13852009 14 96 1.0 1.0 1.0 7.0 138 chr2R 13851871 exon CG30485 + chr2R 13851940 exon CG30485 + chr2R 13852009 exon CG30485 + chr2R_14_13850001 chr2R_13850001 RAL-531 771 chr2R 13925877 13925888 chr2R 13926033 13926044 5 156 9.0 5.0 7.0 0.6 167 chr2R 13925877 intron shot - chr2R 13925960 intron shot - chr2R 13926044 intron shot - chr2R_5_13925001 chr2R_13925001 RAL-531 772 chr2R 13963490 13963535 chr2R 13963598 13963642 13 107 5.5 2.5 4.0 2.6 152 chr2R 13963490 intron Cp1 + chr2R 13963566 intron Cp1 + chr2R 13963642 intron Cp1 + chr2R_13_13960001 chr2R_13960001 RAL-531 773 chr2R 14018138 14018187 chr2R 14018242 14018290 21 103 7.0 7.5 7.2 2.6 152 chr2R 14018138 intron mam + chr2R 14018214 intron mam + chr2R 14018290 intron mam + chr2R_21_14015001 chr2R_14015001 RAL-531 774 chr2R 14037287 14037297 chr2R 14037369 14037400 4 96 0.0 3.5 1.8 1.4 113 chr2R 14037287 intron mam + chr2R 14037344 intron mam + chr2R 14037400 intron mam + chr2R_4_14035001 chr2R_14035001 RAL-531 775 chr2R 14093416 14093421 chr2R 14109587 14109592 4 16171 5.0 2.0 3.5 0.9 16176 chr2R 14093416 intron Prosap - chr2R 14101504 intron Prosap - chr2R 14109592 intron Prosap - chr2R_4_14100001 chr2R_14100001 RAL-531 776 chr2R 14141936 14141952 chr2R 14142061 14142077 7 125 12.5 4.5 8.5 0.7 141 chr2R 14141936 intergenic not near genes chr2R 14142006 intergenic not near genes chr2R 14142077 intergenic not near genes chr2R_7_14140001 chr2R_14140001 RAL-531 777 chr2R 14142426 14142452 chr2R 14142536 14142562 8 109 3.5 4.5 4.0 1.6 136 chr2R 14142426 intergenic not near genes chr2R 14142494 intergenic not near genes chr2R 14142562 intergenic not near genes chr2R_8_14140001 chr2R_14140001 RAL-531 778 chr2R 14142456 14142474 chr2R 14142533 14142584 6 102 1.0 4.5 2.8 1.6 128 chr2R 14142456 intergenic not near genes chr2R 14142520 intergenic not near genes chr2R 14142584 intergenic not near genes chr2R_6_14140001 chr2R_14140001 RAL-531 779 chr2R 14168355 14168398 chr2R 14168461 14168507 13 108 4.5 5.0 4.8 2.2 152 chr2R 14168355 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168431 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168507 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_13_14165001 chr2R_14165001 RAL-531 780 chr2R 14182856 14182896 chr2R 14182962 14183001 13 103 5.5 7.0 6.2 1.8 145 chr2R 14182856 intergenic cg + chr2R 14182928 intergenic cg + chr2R 14183001 intergenic cg + chr2R_13_14180001 chr2R_14180001 RAL-531 781 chr2R 14277560 14277609 chr2R 14277661 14277711 7 100 3.0 5.5 4.2 1.3 151 chr2R 14277560 5` UTR Ih + chr2R 14277636 5` UTR Ih + chr2R 14277711 5` UTR Ih + chr2R_7_14275001 chr2R_14275001 RAL-531 782 chr2R 14357538 14357575 chr2R 14357648 14357684 11 108 4.0 4.5 4.2 2.1 146 chr2R 14357538 intergenic CG8617 -,Arc1 - chr2R 14357611 intergenic Arc1 -,CG8617 - chr2R 14357684 intergenic Arc1 -,CG8617 - chr2R_11_14355001 chr2R_14355001 RAL-531 783 chr2R 14378981 14379010 chr2R 14379445 14379494 10 476 2.5 3.0 2.8 2.6 513 chr2R 14378981 intron Dh44-R1 + chr2R 14379238 intron Dh44-R1 + chr2R 14379494 intron Dh44-R1 + chr2R_10_14375001 chr2R_14375001 RAL-531 784 chr2R 14386424 14386465 chr2R 14386524 14386572 17 104 2.0 2.0 2.0 5.7 148 chr2R 14386424 intergenic not near genes chr2R 14386498 intergenic not near genes chr2R 14386572 intergenic not near genes chr2R_17_14385001 chr2R_14385001 RAL-531 785 chr2R 14453005 14453039 chr2R 14453115 14453149 7 108 4.5 0.0 2.2 2.2 144 chr2R 14453005 intron Oaz + chr2R 14453077 intron Oaz + chr2R 14453149 intron Oaz + chr2R_7_14450001 chr2R_14450001 RAL-531 786 chr2R 14467296 14467327 chr2R 14476466 14476504 roo 5 9168 1.0 4.5 2.8 1.3 9208 chr2R 14467296 intergenic not near genes chr2R 14471900 intergenic not near genes chr2R 14476504 5` UTR CR44462 + chr2R_5_14470001 chr2R_14470001 RAL-531 787 chr2R 14489206 14489241 chr2R 14489320 14489355 8 112 2.5 6.0 4.2 1.5 149 chr2R 14489206 intron L + chr2R 14489280 intron L + chr2R 14489355 intron L + chr2R_8_14485001 chr2R_14485001 RAL-531 788 chr2R 14514447 14514495 chr2R 14514578 14514623 8 129 0.0 3.0 1.5 3.2 176 chr2R 14514447 intron,exon Cpr51A -,CG30197 + chr2R 14514535 intron,intron Cpr51A -,CG30197 + chr2R 14514623 intron,intron Cpr51A -,CG30197 + chr2R_8_14510001 chr2R_14510001 RAL-531 789 chr2R 14538978 14538986 chr2R 14539036 14539062 4 70 4.0 1.5 2.8 1.1 84 chr2R 14538978 intron ttv + chr2R 14539020 intron ttv + chr2R 14539062 intron ttv + chr2R_4_14535001 chr2R_14535001 RAL-531 790 chr2R 14661135 14661160 chr2R 14661234 14661241 6 94 5.5 1.5 3.5 1.3 106 chr2R 14661135 intergenic not near genes chr2R 14661188 intergenic not near genes chr2R 14661241 intergenic not near genes chr2R_6_14660001 chr2R_14660001 RAL-531 791 chr2R 14674147 14674177 chr2R 14674232 14674273 9 91 2.0 2.5 2.2 2.8 126 chr2R 14674147 intron mspo - chr2R 14674210 intron mspo - chr2R 14674273 intron mspo - chr2R_9_14670001 chr2R_14670001 RAL-531 792 chr2R 14722823 14722875 chr2R 14722920 14722972 14 95 6.5 4.0 5.2 2.3 149 chr2R 14722823 intergenic not near genes chr2R 14722898 intergenic not near genes chr2R 14722972 intergenic not near genes chr2R_14_14720001 chr2R_14720001 RAL-531 793 chr2R 14796321 14796361 chr2R 14796438 14796478 19 116 4.5 8.0 6.2 2.6 157 chr2R 14796321 intron kn - chr2R 14796400 intron kn - chr2R 14796478 intron kn - chr2R_19_14795001 chr2R_14795001 RAL-531 794 chr2R 14820886 14820927 chr2R 14820986 14820988 9 91 8.0 3.5 5.8 1.3 102 chr2R 14820886 intergenic not near genes chr2R 14820937 intergenic not near genes chr2R 14820988 intergenic not near genes chr2R_9_14820001 chr2R_14820001 RAL-531 795 chr2R 14873673 14873714 chr2R 14875211 14875251 10 1534 3.0 0.5 1.8 3.6 1578 chr2R 14873673 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874462 exon Cyp6a17 + chr2R 14875251 exon Cyp6a17 + chr2R_10_14870001 chr2R_14870001 RAL-531 796 chr2R 14875227 14875266 chr2R 14875659 14875698 7 430 0.5 4.5 2.5 2.0 471 chr2R 14875227 exon Cyp6a17 + chr2R 14875462 exon Cyp6a17 + chr2R 14875698 3` UTR Cyp6a17 + chr2R_7_14875001 chr2R_14875001 RAL-531 797 chr2R 14889194 14889213 chr2R 14897822 14897841 Max-element 7 8626 14.0 0.5 7.2 0.9 8647 chr2R 14889194 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897841 intergenic not near genes chr2R_7_14890001 chr2R_14890001 RAL-531 798 chr2R 14906471 14906516 chr2R 14906600 14906641 11 125 2.0 5.0 3.5 2.4 170 chr2R 14906471 intron CG10249 - chr2R 14906556 intron CG10249 - chr2R 14906641 intron CG10249 - chr2R_11_14905001 chr2R_14905001 RAL-531 799 chr2R 14911680 14911727 chr2R 14911823 14911870 20 142 4.5 3.0 3.8 4.2 190 chr2R 14911680 intron CG10249 - chr2R 14911775 intron CG10249 - chr2R 14911870 intron CG10249 - chr2R_20_14910001 chr2R_14910001 RAL-531 800 chr2R 14916550 14916564 chr2R 14916640 14916662 6 97 5.0 4.5 4.8 1.0 112 chr2R 14916550 intron CG10249 - chr2R 14916606 intron CG10249 - chr2R 14916662 intron CG10249 - chr2R_6_14915001 chr2R_14915001 RAL-531 801 chr2R 14919137 14919176 chr2R 14919264 14919305 11 129 1.5 0.0 0.8 6.1 168 chr2R 14919137 intron CG10249 - chr2R 14919221 intron CG10249 - chr2R 14919305 intron CG10249 - chr2R_11_14915001 chr2R_14915001 RAL-531 802 chr2R 14922126 14922173 chr2R 14922217 14922254 6 90 2.5 0.5 1.5 2.4 128 chr2R 14922126 intron CG10249 - chr2R 14922190 intron CG10249 - chr2R 14922254 intron CG10249 - chr2R_6_14920001 chr2R_14920001 RAL-531 803 chr2R 14987371 14987415 chr2R 14987535 14987579 15 161 5.0 3.0 4.0 3.0 208 chr2R 14987371 intron pcs + chr2R 14987475 intron pcs + chr2R 14987579 intron pcs + chr2R_15_14985001 chr2R_14985001 RAL-531 804 chr2R 15004707 15004751 chr2R 15005056 15005100 jockey 13 344 3.5 4.0 3.8 2.7 393 chr2R 15004707 intergenic not near genes chr2R 15004904 intergenic not near genes chr2R 15005100 intergenic not near genes chr2R_13_15000001 chr2R_15000001 RAL-531 805 chr2R 15012549 15012599 chr2R 15012652 15012703 20 97 4.0 6.5 5.2 3.2 154 chr2R 15012549 intron hbs + chr2R 15012626 intron hbs + chr2R 15012703 intron hbs + chr2R_20_15010001 chr2R_15010001 RAL-531 806 chr2R 15015445 15015490 chr2R 15022886 15022933 mdg1 7 7439 0.5 4.0 2.2 2.2 7488 chr2R 15015445 intron hbs + chr2R 15019189 intron hbs + chr2R 15022933 intron hbs + chr2R_7_15015001 chr2R_15015001 RAL-531 807 chr2R 15094880 15094905 chr2R 15094977 15094977 4 91 7.5 5.0 6.2 0.6 97 chr2R 15094880 intergenic not near genes chr2R 15094928 intergenic not near genes chr2R 15094977 intergenic not near genes chr2R_4_15090001 chr2R_15090001 RAL-531 808 chr2R 15105177 15105208 chr2R 15105280 15105310 9 103 1.5 3.0 2.2 2.8 133 chr2R 15105177 intergenic not near genes chr2R 15105244 intergenic not near genes chr2R 15105310 intergenic not near genes chr2R_9_15105001 chr2R_15105001 RAL-531 809 chr2R 15119298 15119346 chr2R 15127799 15127826 Tirant 9 8490 5.5 2.5 4.0 1.8 8528 chr2R 15119298 intron chn + chr2R 15123562 intron chn + chr2R 15127826 intron chn + chr2R_9_15120001 chr2R_15120001 RAL-531 810 chr2R 15133474 15133504 chr2R 15133567 15133603 4 98 5.5 6.0 5.8 0.6 129 chr2R 15133474 intron chn + chr2R 15133538 intron chn + chr2R 15133603 intron chn + chr2R_4_15130001 chr2R_15130001 RAL-531 811 chr2R 15137962 15138002 chr2R 15138049 15138079 8 92 3.0 0.5 1.8 2.9 117 chr2R 15137962 intron chn + chr2R 15138020 intron chn + chr2R 15138079 intron chn + chr2R_8_15135001 chr2R_15135001 RAL-531 812 chr2R 15296154 15296157 chr2R 15296247 15296259 4 100 4.0 3.0 3.5 0.9 105 chr2R 15296154 intron Trpm - chr2R 15296206 intron Trpm - chr2R 15296259 intron Trpm - chr2R_4_15295001 chr2R_15295001 RAL-531 813 chr2R 15351309 15351315 chr2R 15351434 15351440 5 125 8.0 13.0 10.5 0.4 131 chr2R 15351309 intron unc-5 + chr2R 15351374 intron unc-5 + chr2R 15351440 intron unc-5 + chr2R_5_15350001 chr2R_15350001 RAL-531 814 chr2R 15472024 15472060 chr2R 15472128 15472164 4 104 0.0 4.0 2.0 1.3 140 chr2R 15472024 intergenic CG43729 +,CG8180 - chr2R 15472094 intergenic CG8180 -,CG43729 + chr2R 15472164 intergenic CG8180 -,CG43729 + chr2R_4_15470001 chr2R_15470001 RAL-531 815 chr2R 15685342 15685388 chr2R 15685465 15685511 7 123 4.5 1.5 3.0 1.8 169 chr2R 15685342 intron,exon Ranbp11 +,CG30082 - chr2R 15685426 intron,intron Ranbp11 +,CG30082 - chr2R 15685511 intron,intron Ranbp11 +,CG30082 - chr2R_7_15685001 chr2R_15685001 RAL-531 816 chr2R 15720753 15720798 chr2R 15720869 15720914 15 114 2.5 3.5 3.0 3.8 161 chr2R 15720753 intergenic not near genes chr2R 15720834 intergenic not near genes chr2R 15720914 intergenic not near genes chr2R_15_15720001 chr2R_15720001 RAL-531 817 chr2R 15848315 15848342 chr2R 15848412 15848439 10 97 2.5 0.0 1.2 4.5 124 chr2R 15848315 intron tun + chr2R 15848377 intron tun + chr2R 15848439 intron tun + chr2R_10_15845001 chr2R_15845001 RAL-531 818 chr2R 15891799 15891836 chr2R 15891895 15891932 7 96 3.0 7.0 5.0 1.2 133 chr2R 15891799 intron sli - chr2R 15891866 intron sli - chr2R 15891932 intron sli - chr2R_7_15890001 chr2R_15890001 RAL-531 819 chr2R 15902298 15902332 chr2R 15902394 15902428 12 96 5.0 2.5 3.8 2.5 130 chr2R 15902298 intron sli - chr2R 15902363 intron sli - chr2R 15902428 intron sli - chr2R_12_15900001 chr2R_15900001 RAL-531 820 chr2R 15914262 15914309 chr2R 15914366 15914392 18 96 3.5 1.5 2.5 5.1 130 chr2R 15914262 intron sli - chr2R 15914327 intron sli - chr2R 15914392 intron sli - chr2R_18_15910001 chr2R_15910001 RAL-531 821 chr2R 16217760 16217794 chr2R 16217856 16217889 10 90 1.0 1.5 1.2 4.5 129 chr2R 16217760 intron mrj - chr2R 16217824 intron mrj - chr2R 16217889 intron mrj - chr2R_10_16215001 chr2R_16215001 RAL-531 822 chr2R 16245409 16245430 chr2R 16245513 16245544 11 108 1.0 4.0 2.5 3.1 135 chr2R 16245409 intron CngA - chr2R 16245476 intron CngA - chr2R 16245544 intron CngA - chr2R_11_16245001 chr2R_16245001 RAL-531 823 chr2R 16279365 16279407 chr2R 16279470 16279512 9 101 0.0 6.5 3.2 2.1 147 chr2R 16279365 intergenic not near genes chr2R 16279438 intergenic not near genes chr2R 16279512 intergenic not near genes chr2R_9_16275001 chr2R_16275001 RAL-531 824 chr2R 16307873 16307906 chr2R 16307970 16308003 16 97 1.5 3.5 2.5 4.6 130 chr2R 16307873 5` UTR Nox + chr2R 16307938 5` UTR Nox + chr2R 16308003 5` UTR Nox + chr2R_16_16305001 chr2R_16305001 RAL-531 825 chr2R 16380110 16380148 chr2R 16380221 16380266 10 110 5.0 4.0 4.5 1.8 156 chr2R 16380110 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380188 3` UTR CR45317 - chr2R 16380266 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_10_16380001 chr2R_16380001 RAL-531 826 chr2R 16406703 16406750 chr2R 16406801 16406848 16 97 3.0 0.5 1.8 5.7 145 chr2R 16406703 intron Sema-2b + chr2R 16406776 intron Sema-2b + chr2R 16406848 intron Sema-2b + chr2R_16_16405001 chr2R_16405001 RAL-531 827 chr2R 16486854 16486878 chr2R 16486969 16486993 9 113 7.0 10.0 8.5 0.9 139 chr2R 16486854 exon CG33458 + chr2R 16486924 intron CG33458 + chr2R 16486993 intron CG33458 + chr2R_9_16485001 chr2R_16485001 RAL-531 828 chr2R 16539628 16539670 chr2R 16544855 16544899 copia 17 5227 3.0 4.0 3.5 3.8 5271 chr2R 16539628 intergenic not near genes chr2R 16542264 intergenic not near genes chr2R 16544899 intergenic not near genes chr2R_17_16540001 chr2R_16540001 RAL-531 829 chr2R 16571856 16571906 chr2R 16571971 16572021 23 115 4.0 4.5 4.2 4.4 165 chr2R 16571856 intergenic CG4927 + chr2R 16571938 intergenic CG4927 + chr2R 16572021 intergenic CG4927 + chr2R_23_16570001 chr2R_16570001 RAL-531 830 chr2R 16617056 16617081 chr2R 16617145 16617180 12 96 7.0 3.5 5.2 1.9 124 chr2R 16617056 intron CG5065 + chr2R 16617118 intron CG5065 + chr2R 16617180 intron CG5065 + chr2R_12_16615001 chr2R_16615001 RAL-531 831 chr2R 16618700 16618732 chr2R 16618796 16618828 7 93 0.5 5.0 2.8 1.8 128 chr2R 16618700 intron CG5065 + chr2R 16618764 intron CG5065 + chr2R 16618828 5` UTR CG5065 + chr2R_7_16615001 chr2R_16615001 RAL-531 832 chr2R 16732624 16732654 chr2R 16732710 16732734 9 89 2.5 3.0 2.8 2.4 110 chr2R 16732624 5` UTR CG30463 - chr2R 16732679 5` UTR CG30463 - chr2R 16732734 5` UTR CG30463 - chr2R_9_16730001 chr2R_16730001 RAL-531 833 chr2R 16739463 16739467 chr2R 16739566 16739570 6 103 5.0 0.0 2.5 1.7 107 chr2R 16739463 intergenic not near genes chr2R 16739516 intergenic not near genes chr2R 16739570 intergenic not near genes chr2R_6_16735001 chr2R_16735001 RAL-531 834 chr2R 16775640 16775675 chr2R 16775924 16775961 7 284 5.0 4.5 4.8 1.2 321 chr2R 16775640 3` UTR Arp53D + chr2R 16775800 intergenic Arp53D + chr2R 16775961 intergenic Arp53D + chr2R_7_16775001 chr2R_16775001 RAL-531 835 chr2R 16801457 16801481 chr2R 16801556 16801575 6 99 7.0 0.0 3.5 1.3 118 chr2R 16801457 intergenic not near genes chr2R 16801516 intergenic not near genes chr2R 16801575 intergenic not near genes chr2R_6_16800001 chr2R_16800001 RAL-531 836 chr2R 16833802 16833834 chr2R 16833913 16833945 6 109 3.0 2.5 2.8 1.6 143 chr2R 16833802 5` UTR CR43650 + chr2R 16833874 5` UTR CR43650 + chr2R 16833945 5` UTR CR43650 + chr2R_6_16830001 chr2R_16830001 RAL-531 837 chr2R 16933317 16933357 chr2R 16933436 16933476 10 119 1.0 8.5 4.8 1.7 159 chr2R 16933317 intron Pkc53E + chr2R 16933396 intron Pkc53E + chr2R 16933476 intron Pkc53E + chr2R_10_16930001 chr2R_16930001 RAL-531 838 chr2R 17079035 17079089 chr2R 17079137 17079190 15 101 5.0 3.5 4.2 2.9 155 chr2R 17079035 intron CG30460 - chr2R 17079112 intron CG30460 - chr2R 17079190 intron CG30460 - chr2R_15_17075001 chr2R_17075001 RAL-531 839 chr2R 17087451 17087491 chr2R 17087548 17087565 4 90 3.5 0.0 1.8 1.4 114 chr2R 17087451 5` UTR CG30460 - chr2R 17087508 5` UTR CG30460 - chr2R 17087565 5` UTR CG30460 - chr2R_4_17085001 chr2R_17085001 RAL-531 840 chr2R 17097519 17097546 chr2R 17097616 17097643 9 95 2.5 7.5 5.0 1.5 124 chr2R 17097519 5` UTR GstS1 - chr2R 17097581 intron GstS1 - chr2R 17097643 intron GstS1 - chr2R_9_17095001 chr2R_17095001 RAL-531 841 chr2R 17120268 17120294 chr2R 17120386 17120405 10 113 5.5 2.0 3.8 2.1 137 chr2R 17120268 exon Amy-p - chr2R 17120336 intergenic Amy-p - chr2R 17120405 intergenic Amy-p - chr2R_10_17120001 chr2R_17120001 RAL-531 842 chr2R 17147227 17147267 chr2R 17152278 17152318 jockey 13 5050 4.0 6.0 5.0 2.2 5091 chr2R 17147227 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152318 intergenic not near genes chr2R_13_17145001 chr2R_17145001 RAL-531 843 chr2R 17183429 17183457 chr2R 17183527 17183570 9 99 6.0 0.0 3.0 2.2 141 chr2R 17183429 intergenic not near genes chr2R 17183500 intergenic not near genes chr2R 17183570 intergenic not near genes chr2R_9_17180001 chr2R_17180001 RAL-531 844 chr2R 17263290 17263327 chr2R 17263391 17263427 9 98 1.0 3.5 2.2 2.8 137 chr2R 17263290 intron mbl + chr2R 17263358 intron mbl + chr2R 17263427 intron mbl + chr2R_9_17260001 chr2R_17260001 RAL-531 845 chr2R 17300637 17300674 chr2R 17300812 17300839 5 169 4.0 2.5 3.2 1.2 202 chr2R 17300637 intron mbl + chr2R 17300738 intron mbl + chr2R 17300839 intron mbl + chr2R_5_17300001 chr2R_17300001 RAL-531 846 chr2R 17331690 17331700 chr2R 17331786 17331796 9 96 9.0 3.5 6.2 1.2 106 chr2R 17331690 intron mbl + chr2R 17331743 intron mbl + chr2R 17331796 intron mbl + chr2R_9_17330001 chr2R_17330001 RAL-531 847 chr2R 17331704 17331727 chr2R 17331784 17331823 7 87 1.0 3.5 2.2 2.2 119 chr2R 17331704 intron mbl + chr2R 17331764 intron mbl + chr2R 17331823 intron mbl + chr2R_7_17330001 chr2R_17330001 RAL-531 848 chr2R 17351394 17351420 chr2R 17351482 17351522 5 95 3.0 7.5 5.2 0.8 128 chr2R 17351394 intron mbl + chr2R 17351458 intron mbl + chr2R 17351522 intron mbl + chr2R_5_17350001 chr2R_17350001 RAL-531 849 chr2R 17389276 17389302 chr2R 17389360 17389381 4 76 3.5 0.5 2.0 1.3 105 chr2R 17389276 intergenic CR44344 - chr2R 17389328 intergenic CR44344 - chr2R 17389381 intergenic CR44344 - chr2R_4_17385001 chr2R_17385001 RAL-531 850 chr2R 17443758 17443803 chr2R 17443854 17443899 13 95 3.5 7.5 5.5 2.0 141 chr2R 17443758 intron EDTP - chr2R 17443828 intron EDTP - chr2R 17443899 intron EDTP - chr2R_13_17440001 chr2R_17440001 RAL-531 851 chr2R 17458990 17459035 chr2R 17459095 17459140 17 105 5.5 7.0 6.2 2.4 150 chr2R 17458990 intron CG14478 + chr2R 17459065 intron CG14478 + chr2R 17459140 intron CG14478 + chr2R_17_17455001 chr2R_17455001 RAL-531 852 chr2R 17470319 17470352 chr2R 17470419 17470419 11 95 2.0 6.0 4.0 2.2 100 chr2R 17470319 intron qkr54B + chr2R 17470369 intron qkr54B + chr2R 17470419 intron qkr54B + chr2R_11_17470001 chr2R_17470001 RAL-531 853 chr2R 17485899 17485944 chr2R 17490675 17490725 F-element 15 4779 8.5 5.0 6.8 1.9 4826 chr2R 17485899 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488312 intron NT5E-2 + chr2R 17490725 intron NT5E-2 + chr2R_15_17485001 chr2R_17485001 RAL-531 854 chr2R 17537698 17537737 chr2R 17540767 17540795 5 3069 19.5 19.0 19.2 0.2 3097 chr2R 17537698 exon eIF3-S9 + chr2R 17539246 intergenic CG43370 +,eIF3-S9 + chr2R 17540795 exon CG43370 + chr2R_5_17535001 chr2R_17535001 RAL-531 855 chr2R 17679581 17679594 chr2R 17679728 17679741 6 146 0.5 5.5 3.0 1.5 160 chr2R 17679581 intron Sema-1b - chr2R 17679661 intron Sema-1b - chr2R 17679741 intron Sema-1b - chr2R_6_17675001 chr2R_17675001 RAL-531 856 chr2R 17708376 17708422 chr2R 17708477 17708523 15 99 5.5 2.5 4.0 3.0 147 chr2R 17708376 intron CG6424 - chr2R 17708450 intron CG6424 - chr2R 17708523 intron CG6424 - chr2R_15_17705001 chr2R_17705001 RAL-531 857 chr2R 17709961 17710117 chr2R 17710072 17710215 22 101 0.0 0.0 0.0 22.0 254 chr2R 17709961 intron CG6424 - chr2R 17710088 intron CG6424 - chr2R 17710215 intron CG6424 - chr2R_22_17710001 chr2R_17710001 RAL-531 858 chr2R 17782341 17782394 chr2R 17783564 17783617 pogo 19 1222 8.5 5.0 6.8 2.4 1276 chr2R 17782341 intergenic CG33981 -,fab1 - chr2R 17782979 intergenic not near genes chr2R 17783617 intergenic mir-31a - chr2R_19_17780001 chr2R_17780001 RAL-531 859 chr2R 17852913 17852953 chr2R 17853021 17853064 18 110 2.5 6.0 4.2 3.5 151 chr2R 17852913 intron olf186-F + chr2R 17852988 intron olf186-F + chr2R 17853064 intron olf186-F + chr2R_18_17850001 chr2R_17850001 RAL-531 860 chr2R 17958274 17958289 chr2R 17958369 17958403 8 108 3.0 4.0 3.5 1.8 129 chr2R 17958274 intergenic not near genes chr2R 17958338 intergenic not near genes chr2R 17958403 intergenic not near genes chr2R_8_17955001 chr2R_17955001 RAL-531 861 chr2R 17961444 17961479 chr2R 17961750 17961762 12 298 4.0 4.0 4.0 2.4 318 chr2R 17961444 intergenic not near genes chr2R 17961603 intergenic not near genes chr2R 17961762 intergenic not near genes chr2R_12_17960001 chr2R_17960001 RAL-531 862 chr2R 17970245 17970276 chr2R 17970355 17970400 15 112 30.5 29.0 29.8 0.5 155 chr2R 17970245 intergenic not near genes chr2R 17970322 intergenic not near genes chr2R 17970400 intergenic not near genes chr2R_15_17970001 chr2R_17970001 RAL-531 863 chr2R 18045656 18045700 chr2R 18046028 18046072 jockey 17 371 4.5 10.0 7.2 2.1 416 chr2R 18045656 intergenic not near genes chr2R 18045864 intergenic not near genes chr2R 18046072 intergenic CG5767 - chr2R_17_18045001 chr2R_18045001 RAL-531 864 chr2R 18050186 18050236 chr2R 18053731 18053769 8 3540 6.5 27.0 16.8 0.4 3583 chr2R 18050186 3` UTR Muc55B - chr2R 18051978 exon Muc55B - chr2R 18053769 exon CG10911 - chr2R_8_18050001 chr2R_18050001 RAL-531 865 chr2R 18073842 18073891 chr2R 18073946 18073986 16 99 7.0 2.5 4.8 2.8 144 chr2R 18073842 intron CG34386 + chr2R 18073914 intron CG34386 + chr2R 18073986 intron CG34386 + chr2R_16_18070001 chr2R_18070001 RAL-531 866 chr2R 18111665 18111713 chr2R 18115553 18115601 F-element 9 3888 2.5 5.5 4.0 1.8 3936 chr2R 18111665 intergenic not near genes chr2R 18113633 intergenic not near genes chr2R 18115601 intergenic not near genes chr2R_9_18110001 chr2R_18110001 RAL-531 867 chr2R 18204122 18204151 chr2R 18204227 18204256 8 105 3.0 0.0 1.5 3.2 134 chr2R 18204122 intergenic not near genes chr2R 18204189 intergenic not near genes chr2R 18204256 intergenic not near genes chr2R_8_18200001 chr2R_18200001 RAL-531 868 chr2R 18219614 18219655 chr2R 18219716 18219757 9 98 4.0 4.0 4.0 1.8 143 chr2R 18219614 intergenic not near genes chr2R 18219686 intergenic not near genes chr2R 18219757 intergenic not near genes chr2R_9_18215001 chr2R_18215001 RAL-531 869 chr2R 18308262 18308311 chr2R 18308388 18308437 12 126 5.5 2.0 3.8 2.5 175 chr2R 18308262 intron sbb - chr2R 18308350 intron sbb - chr2R 18308437 intron sbb - chr2R_12_18305001 chr2R_18305001 RAL-531 870 chr2R 18358385 18358388 chr2R 18372617 18372620 roo 4 14232 6.5 1.5 4.0 0.8 14235 chr2R 18358385 intergenic not near genes chr2R 18365502 intergenic not near genes chr2R 18372620 intergenic not near genes chr2R_4_18365001 chr2R_18365001 RAL-531 871 chr2R 18358389 18358410 chr2R 18372615 18372642 roo 11 14229 5.0 1.5 3.2 2.6 14253 chr2R 18358389 intergenic not near genes chr2R 18365516 intergenic not near genes chr2R 18372642 intergenic not near genes chr2R_11_18365001 chr2R_18365001 RAL-531 872 chr2R 18405731 18405785 chr2R 18405832 18405885 6 100 3.5 0.0 1.8 2.1 154 chr2R 18405731 intergenic GstE6 +,GstE5 + chr2R 18405808 intergenic GstE6 +,GstE5 + chr2R 18405885 intergenic GstE6 + chr2R_6_18405001 chr2R_18405001 RAL-531 873 chr2R 18471897 18471928 chr2R 18471993 18472024 7 95 0.5 2.0 1.2 3.2 127 chr2R 18471897 intron CG30116 - chr2R 18471960 intron CG30116 - chr2R 18472024 intron CG30116 - chr2R_7_18470001 chr2R_18470001 RAL-531 874 chr2R 18487826 18487854 chr2R 18495294 18495325 blood 6 7476 0.0 7.0 3.5 1.3 7499 chr2R 18487826 intron CG30116 - chr2R 18491576 intron CG30116 - chr2R 18495325 intron CG30116 - chr2R_6_18490001 chr2R_18490001 RAL-531 875 chr2R 18528188 18528219 chr2R 18528277 18528287 11 80 4.0 0.5 2.2 3.4 99 chr2R 18528188 intron CG10924 + chr2R 18528238 intron CG10924 + chr2R 18528287 intron CG10924 + chr2R_11_18525001 chr2R_18525001 RAL-531 876 chr2R 18575808 18575829 chr2R 18581995 18582037 3S18 5 6196 1.5 4.0 2.8 1.3 6229 chr2R 18575808 intron GEFmeso - chr2R 18578922 intron GEFmeso - chr2R 18582037 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-531 877 chr2R 18646392 18646420 chr2R 18646556 18646585 13 165 8.0 1.5 4.8 2.2 193 chr2R 18646392 intron SP2637 - chr2R 18646488 intron SP2637 - chr2R 18646585 intron SP2637 - chr2R_13_18645001 chr2R_18645001 RAL-531 878 chr2R 18652333 18652359 chr2R 18652434 18652455 10 100 0.0 4.5 2.2 3.1 122 chr2R 18652333 intron SP2637 - chr2R 18652394 intron SP2637 - chr2R 18652455 intron SP2637 - chr2R_10_18650001 chr2R_18650001 RAL-531 879 chr2R 18785907 18785942 chr2R 18786006 18786018 4 93 1.0 5.0 3.0 1.0 111 chr2R 18785907 intron CG15080 + chr2R 18785962 intron CG15080 + chr2R 18786018 intron CG15080 + chr2R_4_18785001 chr2R_18785001 RAL-531 880 chr2R 18862288 18862407 chr2R 18862395 18862512 12 106 0.0 0.0 0.0 12.0 224 chr2R 18862288 intergenic Jheh3 - chr2R 18862400 intergenic Jheh3 -,CG43069 + chr2R 18862512 intergenic CG43069 +,Jheh3 - chr2R_12_18860001 chr2R_18860001 RAL-531 881 chr2R 18871626 18871662 chr2R 18871731 18871767 9 105 4.5 1.0 2.8 2.4 141 chr2R 18871626 intergenic not near genes chr2R 18871696 intergenic not near genes chr2R 18871767 intergenic not near genes chr2R_9_18870001 chr2R_18870001 RAL-531 882 chr2R 18880338 18880385 chr2R 18880443 18880490 4 105 4.0 5.0 4.5 0.7 152 chr2R 18880338 intron sano + chr2R 18880414 intron sano + chr2R 18880490 intron sano + chr2R_4_18880001 chr2R_18880001 RAL-531 883 chr2R 18926507 18926529 chr2R 18926604 18926636 12 105 1.0 0.5 0.8 6.7 129 chr2R 18926507 intron sano + chr2R 18926572 intron sano + chr2R 18926636 intron sano + chr2R_12_18925001 chr2R_18925001 RAL-531 884 chr2R 18953150 18953157 chr2R 18953257 18953264 4 107 8.0 7.0 7.5 0.5 114 chr2R 18953150 intron sano + chr2R 18953207 intron sano + chr2R 18953264 intron sano + chr2R_4_18950001 chr2R_18950001 RAL-531 885 chr2R 18953159 18953191 chr2R 18953253 18953292 13 105 3.0 5.5 4.2 2.5 133 chr2R 18953159 intron sano + chr2R 18953226 intron sano + chr2R 18953292 intron sano + chr2R_13_18950001 chr2R_18950001 RAL-531 886 chr2R 18964900 18964949 chr2R 18964996 18965044 22 95 5.0 5.5 5.2 3.5 144 chr2R 18964900 intergenic not near genes chr2R 18964972 intergenic not near genes chr2R 18965044 intergenic not near genes chr2R_22_18960001 chr2R_18960001 RAL-531 887 chr2R 19012926 19012961 chr2R 19013030 19013048 7 103 6.0 0.5 3.2 1.7 122 chr2R 19012926 intergenic not near genes chr2R 19012987 intergenic not near genes chr2R 19013048 intergenic not near genes chr2R_7_19010001 chr2R_19010001 RAL-531 888 chr2R 19026027 19026056 chr2R 19026187 19026216 14 160 8.5 1.0 4.8 2.4 189 chr2R 19026027 intron 5-HT1B - chr2R 19026122 intron 5-HT1B - chr2R 19026216 intron 5-HT1B - chr2R_14_19025001 chr2R_19025001 RAL-531 889 chr2R 19066842 19066877 chr2R 19066940 19066971 5 97 0.0 1.0 0.5 3.3 129 chr2R 19066842 intergenic 5-HT1A + chr2R 19066906 intergenic 5-HT1A + chr2R 19066971 intergenic 5-HT1A + chr2R_5_19065001 chr2R_19065001 RAL-531 890 chr2R 19103392 19103430 chr2R 19103502 19103532 4 104 2.5 0.0 1.2 1.8 140 chr2R 19103392 intron 5-HT1A + chr2R 19103462 intron 5-HT1A + chr2R 19103532 intron 5-HT1A + chr2R_4_19100001 chr2R_19100001 RAL-531 891 chr2R 19234819 19234866 chr2R 19234921 19234968 9 99 2.0 7.5 4.8 1.6 149 chr2R 19234819 intron cora + chr2R 19234894 intron cora + chr2R 19234968 intron cora + chr2R_9_19230001 chr2R_19230001 RAL-531 892 chr2R 19300942 19300994 chr2R 19301045 19301097 16 98 4.0 5.0 4.5 2.9 155 chr2R 19300942 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301097 intron Tab2 + chr2R_16_19300001 chr2R_19300001 RAL-531 893 chr2R 19528082 19528124 chr2R 19528179 19528221 12 97 3.5 8.5 6.0 1.7 139 chr2R 19528082 3` UTR sm - chr2R 19528152 3` UTR sm - chr2R 19528221 3` UTR sm - chr2R_12_19525001 chr2R_19525001 RAL-531 894 chr2R 19696159 19696210 chr2R 19696268 19696319 18 108 7.0 4.5 5.8 2.6 160 chr2R 19696159 5` UTR CR44506 + chr2R 19696239 5` UTR CR44506 + chr2R 19696319 5` UTR CR44506 + chr2R_18_19695001 chr2R_19695001 RAL-531 895 chr2R 19714696 19714722 chr2R 19714780 19714800 4 88 0.0 2.0 1.0 2.0 104 chr2R 19714696 3` UTR CG8517 + chr2R 19714748 3` UTR CG8517 + chr2R 19714800 3` UTR CG8517 + chr2R_4_19710001 chr2R_19710001 RAL-531 896 chr2R 19715838 19715851 chr2R 19723327 19723340 blood 4 7486 8.0 4.0 6.0 0.6 7502 chr2R 19715838 intergenic not near genes chr2R 19719589 intergenic not near genes chr2R 19723340 intergenic not near genes chr2R_4_19715001 chr2R_19715001 RAL-531 897 chr2R 19773989 19774042 chr2R 19774122 19774162 13 131 5.0 4.5 4.8 2.2 173 chr2R 19773989 intergenic not near genes chr2R 19774076 intergenic not near genes chr2R 19774162 intergenic not near genes chr2R_13_19770001 chr2R_19770001 RAL-531 898 chr2R 19776580 19776621 chr2R 19779923 19779964 jockey 11 3340 2.5 11.0 6.8 1.4 3384 chr2R 19776580 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779964 intergenic not near genes chr2R_11_19775001 chr2R_19775001 RAL-531 899 chr2R 19914834 19914872 chr2R 19922266 19922304 mdg1 13 7430 6.5 3.5 5.0 2.2 7470 chr2R 19914834 intergenic not near genes chr2R 19918569 intergenic not near genes chr2R 19922304 intergenic not near genes chr2R_13_19915001 chr2R_19915001 RAL-531 900 chr2R 19943250 19943294 chr2R 19943380 19943405 11 127 2.5 2.5 2.5 3.1 155 chr2R 19943250 intergenic not near genes chr2R 19943328 intergenic not near genes chr2R 19943405 intergenic not near genes chr2R_11_19940001 chr2R_19940001 RAL-531 901 chr2R 20069226 20069235 chr2R 20071876 20071885 opus 5 2649 10.5 4.5 7.5 0.6 2659 chr2R 20069226 intergenic not near genes chr2R 20070556 intergenic not near genes chr2R 20071885 intergenic not near genes chr2R_5_20070001 chr2R_20070001 RAL-531 902 chr2R 20069236 20069273 chr2R 20071875 20071923 opus 10 2647 4.0 4.5 4.2 1.9 2687 chr2R 20069236 intergenic not near genes chr2R 20070580 intergenic not near genes chr2R 20071923 intergenic not near genes chr2R_10_20070001 chr2R_20070001 RAL-531 903 chr2R 20080603 20080612 chr2R 20080697 20080708 4 94 0.0 8.5 4.2 0.8 105 chr2R 20080603 intergenic not near genes chr2R 20080656 intergenic not near genes chr2R 20080708 intergenic not near genes chr2R_4_20080001 chr2R_20080001 RAL-531 904 chr2R 20125725 20125749 chr2R 20125820 20125845 9 95 3.0 13.0 8.0 1.0 120 chr2R 20125725 intergenic not near genes chr2R 20125785 intergenic not near genes chr2R 20125845 intergenic not near genes chr2R_9_20125001 chr2R_20125001 RAL-531 905 chr2R 20218744 20218788 chr2R 20218847 20218891 9 103 3.0 3.5 3.2 2.1 147 chr2R 20218744 intergenic not near genes chr2R 20218818 intergenic not near genes chr2R 20218891 intergenic not near genes chr2R_9_20215001 chr2R_20215001 RAL-531 906 chr2R 20223934 20223947 chr2R 20224039 20224046 5 104 13.5 3.5 8.5 0.5 112 chr2R 20223934 intergenic not near genes chr2R 20223990 intergenic not near genes chr2R 20224046 intergenic not near genes chr2R_5_20220001 chr2R_20220001 RAL-531 907 chr2R 20223950 20223986 chr2R 20224035 20224091 10 101 3.5 3.0 3.2 2.4 141 chr2R 20223950 intergenic not near genes chr2R 20224020 intergenic not near genes chr2R 20224091 intergenic not near genes chr2R_10_20220001 chr2R_20220001 RAL-531 908 chr2R 20338750 20338791 chr2R 20338850 20338891 7 100 2.5 0.0 1.2 3.2 141 chr2R 20338750 intergenic not near genes chr2R 20338820 intergenic not near genes chr2R 20338891 intergenic not near genes chr2R_7_20335001 chr2R_20335001 RAL-531 909 chr2R 20379137 20379148 chr2R 20379240 20379251 5 103 5.0 0.0 2.5 1.4 114 chr2R 20379137 intergenic not near genes chr2R 20379194 intergenic not near genes chr2R 20379251 intergenic not near genes chr2R_5_20375001 chr2R_20375001 RAL-531 910 chr2R 20541974 20542017 chr2R 20542072 20542115 16 98 4.0 5.5 4.8 2.8 141 chr2R 20541974 intergenic not near genes chr2R 20542044 intergenic not near genes chr2R 20542115 intergenic not near genes chr2R_16_20540001 chr2R_20540001 RAL-531 911 chr2R 20569911 20569953 chr2R 20570012 20570040 5 97 0.0 2.0 1.0 2.5 129 chr2R 20569911 intron qsm - chr2R 20569976 intron qsm - chr2R 20570040 intron qsm - chr2R_5_20565001 chr2R_20565001 RAL-531 912 chr2R 20610100 20610123 chr2R 20610209 20610216 7 107 4.0 0.0 2.0 2.3 116 chr2R 20610100 intron Hil - chr2R 20610158 intron Hil - chr2R 20610216 intron Hil - chr2R_7_20610001 chr2R_20610001 RAL-531 913 chr2R 20706641 20706673 chr2R 20706822 20706876 10 194 2.0 2.5 2.2 3.1 235 chr2R 20706641 intron dpr + chr2R 20706758 intron dpr + chr2R 20706876 intron dpr + chr2R_10_20705001 chr2R_20705001 RAL-531 914 chr2R 20739463 20739477 chr2R 20744213 20744242 F-element 7 4775 1.0 2.0 1.5 2.8 4779 chr2R 20739463 intron dpr + chr2R 20741852 intron dpr + chr2R 20744242 intron dpr + chr2R_7_20740001 chr2R_20740001 RAL-531 915 chr2R 20783292 20783331 chr2R 20788084 20788123 F-element 11 4789 3.5 8.0 5.8 1.6 4831 chr2R 20783292 intergenic not near genes chr2R 20785708 intergenic not near genes chr2R 20788123 intergenic CG43666 - chr2R_11_20785001 chr2R_20785001 RAL-531 916 chr2R 20863108 20863138 chr2R 20863214 20863233 4 101 2.0 1.5 1.8 1.4 125 chr2R 20863108 intergenic not near genes chr2R 20863170 intergenic not near genes chr2R 20863233 intergenic not near genes chr2R_4_20860001 chr2R_20860001 RAL-531 917 chr2R 20942359 20942370 chr2R 20942477 20942478 7 117 0.0 4.5 2.2 2.2 119 chr2R 20942359 intergenic not near genes chr2R 20942418 intergenic not near genes chr2R 20942478 intergenic not near genes chr2R_7_20940001 chr2R_20940001 RAL-531 918 chr2R 21040862 21040893 chr2R 21040938 21040985 14 91 4.5 4.5 4.5 2.5 123 chr2R 21040862 intergenic not near genes chr2R 21040924 intergenic not near genes chr2R 21040985 intergenic not near genes chr2R_14_21040001 chr2R_21040001 RAL-531 919 chr2R 21075674 21075695 chr2R 21075771 21075779 4 89 3.5 2.5 3.0 1.0 105 chr2R 21075674 intron Treh + chr2R 21075726 intron Treh + chr2R 21075779 intron Treh + chr2R_4_21075001 chr2R_21075001 RAL-531 920 chr2R 21103526 21103553 chr2R 21103626 21103643 8 96 3.5 0.0 1.8 2.9 117 chr2R 21103526 intron ktub + chr2R 21103584 intron ktub + chr2R 21103643 intron ktub + chr2R_8_21100001 chr2R_21100001 RAL-531 921 chr2R 21113465 21113483 chr2R 21113568 21113592 8 108 5.5 4.5 5.0 1.3 127 chr2R 21113465 intron ktub + chr2R 21113528 intron ktub + chr2R 21113592 intron ktub + chr2R_8_21110001 chr2R_21110001 RAL-531 922 chr2R 21136880 21136918 chr2R 21136984 21137002 10 100 1.5 3.0 2.2 3.1 122 chr2R 21136880 intron Magi - chr2R 21136941 intron Magi - chr2R 21137002 intron Magi - chr2R_10_21135001 chr2R_21135001 RAL-531 923 chr2R 21151142 21151146 chr2R 21153795 21153799 opus 4 2653 0.5 5.5 3.0 1.0 2657 chr2R 21151142 intron CG30389 - chr2R 21152470 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-531 924 chr2R 21188206 21188243 chr2R 21188307 21188344 7 101 4.0 6.0 5.0 1.2 138 chr2R 21188206 exon tud + chr2R 21188275 intron tud + chr2R 21188344 intron tud + chr2R_7_21185001 chr2R_21185001 RAL-531 925 chr2R 21217319 21217341 chr2R 21217419 21217444 4 100 4.0 0.0 2.0 1.3 125 chr2R 21217319 exon CG15661 - chr2R 21217382 5` UTR CG15661 - chr2R 21217444 intron CG15661 - chr2R_4_21215001 chr2R_21215001 RAL-531 926 chr2R 21222653 21222694 chr2R 21222875 21222921 4 223 2.0 0.0 1.0 2.0 268 chr2R 21222653 intron ASPP - chr2R 21222787 intron ASPP - chr2R 21222921 intron ASPP - chr2R_4_21220001 chr2R_21220001 RAL-531 927 chr2R 21226028 21226070 chr2R 21226265 21226308 7 226 4.0 3.5 3.8 1.5 280 chr2R 21226028 intron ASPP - chr2R 21226168 intron ASPP - chr2R 21226308 intron ASPP - chr2R_7_21225001 chr2R_21225001 RAL-531 928 chr2R 21381909 21381936 chr2R 21382016 21382043 5 104 5.5 0.0 2.8 1.3 134 chr2R 21381909 intergenic not near genes chr2R 21381976 intergenic not near genes chr2R 21382043 intergenic not near genes chr2R_5_21380001 chr2R_21380001 RAL-531 929 chr2R 21417225 21417271 chr2R 21417430 21417476 4 205 4.5 0.0 2.2 1.2 251 chr2R 21417225 intron Sdc - chr2R 21417350 intron Sdc - chr2R 21417476 intron Sdc - chr2R_4_21415001 chr2R_21415001 RAL-531 930 chr2R 21472294 21472335 chr2R 21472390 21472404 7 91 3.0 2.0 2.5 2.0 110 chr2R 21472294 intron Sdc - chr2R 21472349 intron Sdc - chr2R 21472404 intron Sdc - chr2R_7_21470001 chr2R_21470001 RAL-531 931 chr2R 21481198 21481209 chr2R 21481364 21481379 4 170 8.0 6.0 7.0 0.5 181 chr2R 21481198 intergenic Sdc - chr2R 21481288 intergenic Sdc - chr2R 21481379 intergenic Sdc - chr2R_4_21480001 chr2R_21480001 RAL-531 932 chr2R 21481220 21481244 chr2R 21481379 21481415 4 158 4.0 9.5 6.8 0.5 195 chr2R 21481220 intergenic Sdc - chr2R 21481318 intergenic Sdc - chr2R 21481415 intergenic Sdc - chr2R_4_21480001 chr2R_21480001 RAL-531 933 chr2R 21540675 21540703 chr2R 21540906 21540934 14 231 2.5 1.5 2.0 4.7 259 chr2R 21540675 intron Egfr + chr2R 21540804 intron Egfr + chr2R 21540934 intron Egfr + chr2R_14_21540001 chr2R_21540001 RAL-531 934 chr2R 21598946 21598963 chr2R 21599126 21599132 5 176 5.5 5.0 5.2 0.8 186 chr2R 21598946 intergenic not near genes chr2R 21599039 intergenic not near genes chr2R 21599132 intergenic not near genes chr2R_5_21595001 chr2R_21595001 RAL-531 935 chr2R 21598965 21599000 chr2R 21599123 21599180 8 170 1.5 5.0 3.2 1.9 215 chr2R 21598965 intergenic not near genes chr2R 21599072 intergenic not near genes chr2R 21599180 intergenic not near genes chr2R_8_21595001 chr2R_21595001 RAL-531 936 chr2R 21690427 21690456 chr2R 21690537 21690545 7 103 3.0 5.0 4.0 1.4 118 chr2R 21690427 3` UTR,exon CG42497 -,Tim10 - chr2R 21690486 intron,intron CG42497 -,Tim10 - chr2R 21690545 intron,intron CG42497 -,Tim10 - chr2R_7_21690001 chr2R_21690001 RAL-531 937 chr2R 21732152 21732167 chr2R 21732257 21732272 6 105 0.0 2.5 1.2 2.7 120 chr2R 21732152 intergenic not near genes chr2R 21732212 intergenic not near genes chr2R 21732272 intergenic not near genes chr2R_6_21730001 chr2R_21730001 RAL-531 938 chr2R 21753062 21753116 chr2R 21753567 21753593 roo 16 502 2.5 2.5 2.5 4.6 531 chr2R 21753062 intergenic not near genes chr2R 21753328 intergenic not near genes chr2R 21753593 intergenic not near genes chr2R_16_21750001 chr2R_21750001 RAL-531 939 chr2R 21759549 21759576 chr2R 21759651 21759662 9 102 3.0 3.0 3.0 2.2 113 chr2R 21759549 intergenic not near genes chr2R 21759606 intergenic not near genes chr2R 21759662 intergenic not near genes chr2R_9_21755001 chr2R_21755001 RAL-531 940 chr2R 21888299 21888323 chr2R 21888410 21888424 7 108 3.0 6.0 4.5 1.3 125 chr2R 21888299 intron Fili + chr2R 21888362 intron Fili + chr2R 21888424 intron Fili + chr2R_7_21885001 chr2R_21885001 RAL-531 941 chr2R 21906259 21906297 chr2R 21906380 21906418 13 121 3.0 1.0 2.0 4.3 159 chr2R 21906259 intron Fili + chr2R 21906338 intron Fili + chr2R 21906418 intron Fili + chr2R_13_21905001 chr2R_21905001 RAL-531 942 chr2R 21953163 21953199 chr2R 21953295 21953330 7 130 6.5 1.0 3.8 1.5 167 chr2R 21953163 intergenic CR43405 - chr2R 21953246 intergenic CR43405 - chr2R 21953330 intergenic CR43405 - chr2R_7_21950001 chr2R_21950001 RAL-531 943 chr2R 22009017 22009068 chr2R 22009126 22009164 9 103 0.0 5.5 2.8 2.4 147 chr2R 22009017 intron CG34370 - chr2R 22009090 intron CG34370 - chr2R 22009164 intron CG34370 - chr2R_9_22005001 chr2R_22005001 RAL-531 944 chr2R 22029504 22029535 chr2R 22029602 22029633 11 95 3.0 0.0 1.5 4.4 129 chr2R 22029504 intron CG34370 - chr2R 22029568 intron CG34370 - chr2R 22029633 intron CG34370 - chr2R_11_22025001 chr2R_22025001 RAL-531 945 chr2R 22072680 22072711 chr2R 22072772 22072816 8 103 3.0 3.0 3.0 2.0 136 chr2R 22072680 intron CG11474 - chr2R 22072748 intron CG11474 - chr2R 22072816 exon CG11474 - chr2R_8_22070001 chr2R_22070001 RAL-531 946 chr2R 22132274 22132283 chr2R 22132374 22132383 5 100 4.0 2.0 3.0 1.2 109 chr2R 22132274 intergenic not near genes chr2R 22132328 intergenic not near genes chr2R 22132383 intergenic not near genes chr2R_5_22130001 chr2R_22130001 RAL-531 947 chr2R 22185670 22185695 chr2R 22185789 22185808 5 118 2.0 1.5 1.8 1.8 138 chr2R 22185670 3` UTR MED16 + chr2R 22185739 3` UTR MED16 + chr2R 22185808 3` UTR MED16 + chr2R_5_22185001 chr2R_22185001 RAL-531 948 chr2R 22349696 22349722 chr2R 22351474 22351518 jockey 8 1797 4.0 3.5 3.8 1.7 1822 chr2R 22349696 intron Liprin-gamma - chr2R 22350607 intron Liprin-gamma - chr2R 22351518 intron Liprin-gamma - chr2R_8_22350001 chr2R_22350001 RAL-531 949 chr2R 22360367 22360377 chr2R 22360820 22360830 jockey 5 453 8.5 3.0 5.8 0.7 463 chr2R 22360367 intron Liprin-gamma - chr2R 22360598 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-531 950 chr2R 22362640 22362687 chr2R 22362739 22362768 13 95 5.0 7.0 6.0 1.9 128 chr2R 22362640 intron Liprin-gamma - chr2R 22362704 intron Liprin-gamma - chr2R 22362768 intron Liprin-gamma - chr2R_13_22360001 chr2R_22360001 RAL-531 951 chr2R 22399994 22400012 chr2R 22400062 22400111 7 89 1.5 2.0 1.8 2.5 117 chr2R 22399994 intron babos - chr2R 22400052 intron babos - chr2R 22400111 intron babos - chr2R_7_22400001 chr2R_22400001 RAL-531 952 chr2R 22439691 22439745 chr2R 22439803 22439806 9 89 2.0 4.0 3.0 2.2 115 chr2R 22439691 intergenic not near genes chr2R 22439748 intergenic not near genes chr2R 22439806 intergenic not near genes chr2R_9_22435001 chr2R_22435001 RAL-531 953 chr2R 22453205 22453221 chr2R 22453323 22453344 5 121 0.0 1.5 0.8 2.8 139 chr2R 22453205 intergenic not near genes chr2R 22453274 intergenic not near genes chr2R 22453344 intergenic not near genes chr2R_5_22450001 chr2R_22450001 RAL-531 954 chr2R 22465303 22465348 chr2R 22465522 22465562 BS 18 218 5.0 5.5 5.2 2.9 259 chr2R 22465303 intron CG10384 + chr2R 22465432 intron CG10384 + chr2R 22465562 intron CG10384 + chr2R_18_22465001 chr2R_22465001 RAL-531 955 chr2R 22477917 22477947 chr2R 22478090 22478120 10 173 3.5 1.5 2.5 2.9 203 chr2R 22477917 intergenic CG4752 + chr2R 22478018 intergenic CG4752 + chr2R 22478120 intergenic CG4752 + chr2R_10_22475001 chr2R_22475001 RAL-531 956 chr2R 22524954 22524985 chr2R 22525050 22525071 9 94 4.0 3.5 3.8 1.9 117 chr2R 22524954 intron px - chr2R 22525012 intron px - chr2R 22525071 intron px - chr2R_9_22525001 chr2R_22525001 RAL-531 957 chr2R 22525741 22525786 chr2R 22529319 22529334 jockey 10 3575 1.0 1.5 1.2 4.5 3593 chr2R 22525741 intron px - chr2R 22527538 intron px - chr2R 22529334 intron px - chr2R_10_22525001 chr2R_22525001 RAL-531 958 chr2R 22541615 22541656 chr2R 22541784 22541825 14 167 4.0 7.0 5.5 2.2 210 chr2R 22541615 intron px - chr2R 22541720 intron px - chr2R 22541825 intron px - chr2R_14_22540001 chr2R_22540001 RAL-531 959 chr2R 22545602 22545640 chr2R 22545701 22545737 12 98 4.5 7.5 6.0 1.7 135 chr2R 22545602 intron px - chr2R 22545670 intron px - chr2R 22545737 intron px - chr2R_12_22545001 chr2R_22545001 RAL-531 960 chr2R 22623433 22623482 chr2R 22623593 22623641 9 149 5.0 3.5 4.2 1.7 208 chr2R 22623433 intron CG33143 + chr2R 22623537 intron CG33143 + chr2R 22623641 intron CG33143 + chr2R_9_22620001 chr2R_22620001 RAL-531 961 chr2R 22654368 22654402 chr2R 22654458 22654468 5 91 0.0 6.5 3.2 1.2 100 chr2R 22654368 exon Cyp6d2 - chr2R 22654418 5` UTR Cyp6d2 - chr2R 22654468 5` UTR Cyp6d2 - chr2R_5_22650001 chr2R_22650001 RAL-531 962 chr2R 22723212 22723263 chr2R 22723308 22723359 11 94 4.5 1.5 3.0 2.8 147 chr2R 22723212 intron jbug - chr2R 22723286 intron jbug - chr2R 22723359 intron jbug - chr2R_11_22720001 chr2R_22720001 RAL-531 963 chr2R 22774940 22775000 chr2R 22775379 22775439 jockey 8 435 1.5 4.0 2.8 2.1 499 chr2R 22774940 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775439 intron CG42260 - chr2R_8_22775001 chr2R_22775001 RAL-531 964 chr2R 22785715 22785756 chr2R 22785813 22785854 17 95 4.0 5.5 4.8 2.9 139 chr2R 22785715 intron CG42260 - chr2R 22785784 intron CG42260 - chr2R 22785854 intron CG42260 - chr2R_17_22785001 chr2R_22785001 RAL-531 965 chr2R 22843022 22843046 chr2R 22845004 22845028 flea 11 1982 4.5 10.0 7.2 1.3 2006 chr2R 22843022 intergenic CG9826 + chr2R 22844025 intergenic not near genes chr2R 22845028 intergenic not near genes chr2R_11_22840001 chr2R_22840001 RAL-531 966 chr2R 22958338 22958389 chr2R 22958483 22958534 12 145 1.0 1.0 1.0 6.0 196 chr2R 22958338 intergenic not near genes chr2R 22958436 intergenic not near genes chr2R 22958534 intergenic not near genes chr2R_12_22955001 chr2R_22955001 RAL-531 967 chr2R 23007501 23007517 chr2R 23007599 23007610 4 96 5.5 3.0 4.2 0.8 109 chr2R 23007501 intron twi + chr2R 23007556 intron twi + chr2R 23007610 intron twi + chr2R_4_23005001 chr2R_23005001 RAL-531 968 chr2R 23061730 23061755 chr2R 23061866 23061887 4 130 3.5 7.5 5.5 0.6 157 chr2R 23061730 3` UTR l(2)06496 - chr2R 23061808 3` UTR l(2)06496 - chr2R 23061887 3` UTR l(2)06496 - chr2R_4_23060001 chr2R_23060001 RAL-531 969 chr2R 23186551 23186595 chr2R 23186649 23186683 14 93 6.0 2.0 4.0 2.8 132 chr2R 23186551 intron CG34371 - chr2R 23186617 intron CG34371 - chr2R 23186683 intron CG34371 - chr2R_14_23185001 chr2R_23185001 RAL-531 970 chr2R 23190002 23190020 chr2R 23190102 23190120 8 100 8.0 0.0 4.0 1.6 118 chr2R 23190002 intron CG34371 - chr2R 23190061 intron CG34371 - chr2R 23190120 intron CG34371 - chr2R_8_23190001 chr2R_23190001 RAL-531 971 chr2R 23236796 23236853 chr2R 23236914 23236967 6 112 0.0 0.0 0.0 6.0 171 chr2R 23236796 intergenic not near genes chr2R 23236882 intergenic not near genes chr2R 23236967 intergenic not near genes chr2R_6_23235001 chr2R_23235001 RAL-531 972 chr2R 23351910 23351950 chr2R 23352003 23352051 4 102 0.5 1.0 0.8 2.2 141 chr2R 23351910 exon CG34210 + chr2R 23351980 3` UTR CG34210 + chr2R 23352051 3` UTR CG34210 + chr2R_4_23350001 chr2R_23350001 RAL-531 973 chr2R 23402596 23402641 chr2R 23407692 23407736 flea 9 5093 3.5 7.5 5.5 1.4 5140 chr2R 23402596 intergenic CG3520 - chr2R 23405166 intergenic not near genes chr2R 23407736 intergenic not near genes chr2R_9_23405001 chr2R_23405001 RAL-531 974 chr2R 23428803 23428818 chr2R 23428895 23428907 7 96 1.5 5.5 3.5 1.6 104 chr2R 23428803 intron CG9815 - chr2R 23428855 intron CG9815 - chr2R 23428907 intron CG9815 - chr2R_7_23425001 chr2R_23425001 RAL-531 975 chr2R 23508904 23508941 chr2R 23509041 23509078 13 137 6.0 5.5 5.8 1.9 174 chr2R 23508904 intergenic not near genes chr2R 23508991 intergenic not near genes chr2R 23509078 intergenic not near genes chr2R_13_23505001 chr2R_23505001 RAL-531 976 chr2R 23518173 23518210 chr2R 23518271 23518307 6 98 2.5 5.0 3.8 1.2 134 chr2R 23518173 intergenic not near genes chr2R 23518240 intergenic not near genes chr2R 23518307 intergenic not near genes chr2R_6_23515001 chr2R_23515001 RAL-531 977 chr2R 23563886 23563916 chr2R 23563975 23564009 8 96 1.5 5.5 3.5 1.8 123 chr2R 23563886 3` UTR Pi3K59F + chr2R 23563948 3` UTR Pi3K59F + chr2R 23564009 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_8_23560001 chr2R_23560001 RAL-531 978 chr2R 23607016 23607193 chr2R 23607117 23607306 32 102 2.0 2.0 2.0 10.7 290 chr2R 23607016 intron CG17664 - chr2R 23607161 intron CG17664 - chr2R 23607306 intron CG17664 - chr2R_32_23605001 chr2R_23605001 RAL-531 979 chr2R 23722955 23723007 chr2R 23723051 23723102 19 94 2.5 4.5 3.5 4.2 147 chr2R 23722955 intron Sesn + chr2R 23723028 intron Sesn + chr2R 23723102 intron Sesn + chr2R_19_23720001 chr2R_23720001 RAL-531 980 chr2R 23771256 23771306 chr2R 23771357 23771404 5 99 4.0 0.0 2.0 1.7 148 chr2R 23771256 intron CG9850 - chr2R 23771330 intron CG9850 - chr2R 23771404 intron CG9850 - chr2R_5_23770001 chr2R_23770001 RAL-531 981 chr2R 23865808 23865852 chr2R 23865910 23865938 9 100 5.0 4.5 4.8 1.6 130 chr2R 23865808 intron CG5569 + chr2R 23865873 intron CG5569 + chr2R 23865938 intron CG5569 + chr2R_9_23865001 chr2R_23865001 RAL-531 982 chr2R 23926809 23926865 chr2R 23926911 23926950 4 97 0.0 3.0 1.5 1.6 141 chr2R 23926809 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926880 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926950 3` UTR Ca-P60A - chr2R_4_23925001 chr2R_23925001 RAL-531 983 chr2R 23986505 23986533 chr2R 23986605 23986633 8 100 0.5 6.0 3.2 1.9 128 chr2R 23986505 intron Phm - chr2R 23986569 intron Phm - chr2R 23986633 intron,5` UTR Phm -,CG30178 + chr2R_8_23985001 chr2R_23985001 RAL-531 984 chr2R 24031363 24031412 chr2R 24031467 24031516 15 104 8.0 9.5 8.8 1.5 153 chr2R 24031363 5` UTR CG30172 - chr2R 24031440 intergenic CG30172 -,Chi - chr2R 24031516 intergenic Chi -,CG30172 - chr2R_15_24030001 chr2R_24030001 RAL-531 985 chr2R 24166910 24166939 chr2R 24167011 24167030 7 100 0.0 5.5 2.8 1.8 120 chr2R 24166910 intron CG3328 + chr2R 24166970 intron CG3328 + chr2R 24167030 intron CG3328 + chr2R_7_24165001 chr2R_24165001 RAL-531 986 chr2R 24177215 24177250 chr2R 24184720 24184746 412 16 7504 10.5 1.5 6.0 2.3 7531 chr2R 24177215 3` UTR Nop60B + chr2R 24180980 intron Nop60B + chr2R 24184746 3` UTR Nop60B + chr2R_16_24180001 chr2R_24180001 RAL-531 987 chr2R 24353412 24353446 chr2R 24361794 24361828 roo 16 8381 4.5 5.0 4.8 2.8 8416 chr2R 24353412 intron,intron bs +,CR44811 - chr2R 24357620 intron,intron bs +,CR44811 - chr2R 24361828 intron,intron bs +,CR44811 - chr2R_16_24355001 chr2R_24355001 RAL-531 988 chr2R 24383805 24383831 chr2R 24383906 24383932 8 101 7.5 0.5 4.0 1.6 127 chr2R 24383805 intron mAChR-A - chr2R 24383868 intron mAChR-A - chr2R 24383932 exon mAChR-A - chr2R_8_24380001 chr2R_24380001 RAL-531 989 chr2R 24493080 24493119 chr2R 24493189 24493225 5 107 0.0 6.0 3.0 1.2 145 chr2R 24493080 intergenic CG13590 -,CG13589 - chr2R 24493152 intergenic CG13590 -,CG13589 - chr2R 24493225 intergenic CG13590 -,CG13589 - chr2R_5_24490001 chr2R_24490001 RAL-531 990 chr2R 24591507 24591547 chr2R 24591593 24591643 16 93 0.5 0.5 0.5 10.7 136 chr2R 24591507 intron pio + chr2R 24591575 intron pio + chr2R 24591643 intron pio + chr2R_16_24590001 chr2R_24590001 RAL-531 991 chr2R 24727891 24727915 chr2R 24735408 24735421 mdg1 5 7517 1.0 5.5 3.2 1.2 7530 chr2R 24727891 intron Mid1 - chr2R 24731656 intron Mid1 - chr2R 24735421 intron Mid1 - chr2R_5_24730001 chr2R_24730001 RAL-531 992 chr2R 24767979 24768019 chr2R 24768082 24768090 6 96 1.5 1.5 1.5 2.4 111 chr2R 24767979 5` UTR GstE12 - chr2R 24768034 5` UTR GstE12 - chr2R 24768090 5` UTR GstE12 - chr2R_6_24765001 chr2R_24765001 RAL-531 993 chr2R 24848648 24848676 chr2R 24848752 24848780 10 103 0.5 8.0 4.2 1.9 132 chr2R 24848648 intergenic CG3650 + chr2R 24848714 intergenic CG3650 + chr2R 24848780 intergenic CG3650 + chr2R_10_24845001 chr2R_24845001 RAL-531 994 chr2R 5171817 5171817 chr2R 25018561 25018577 4 19846752 12.5 6.0 9.2 0.4 19846760 chr2R 5171817 intergenic not near genes chr2R 15095197 intergenic not near genes chr2R 25018577 intron uzip + chr2R_4_15095001 chr2R_15095001 RAL-531 995 chr2R 25061316 25061335 chr2R 25061419 25061438 5 101 6.5 3.5 5.0 0.8 122 chr2R 25061316 intergenic not near genes chr2R 25061377 intergenic not near genes chr2R 25061438 intergenic not near genes chr2R_5_25060001 chr2R_25060001 RAL-531 996 chr2R 25061336 25061368 chr2R 25061418 25061449 6 95 3.5 3.5 3.5 1.3 113 chr2R 25061336 intergenic not near genes chr2R 25061392 intergenic not near genes chr2R 25061449 intergenic not near genes chr2R_6_25060001 chr2R_25060001 RAL-531 997 chr2R 25081720 25081766 chr2R 25081888 25081934 16 168 7.0 4.5 5.8 2.4 214 chr2R 25081720 intron gol - chr2R 25081827 intron gol - chr2R 25081934 intron gol - chr2R_16_25080001 chr2R_25080001 RAL-531 998 chr2R 25101256 25101306 chr2R 25101378 25101414 11 115 2.5 0.5 1.5 4.4 158 chr2R 25101256 intron lov - chr2R 25101335 intron lov - chr2R 25101414 intron lov - chr2R_11_25100001 chr2R_25100001 RAL-531 999 chr2R 25102508 25102511 chr2R 25102697 25102700 4 189 6.5 4.0 5.2 0.6 192 chr2R 25102508 intron lov - chr2R 25102604 intron lov - chr2R 25102700 intron lov - chr2R_4_25100001 chr2R_25100001 RAL-531 1000 chr2R 25102521 25102551 chr2R 25102690 25102732 7 181 2.0 3.0 2.5 2.0 211 chr2R 25102521 intron lov - chr2R 25102626 intron lov - chr2R 25102732 intron lov - chr2R_7_25100001 chr2R_25100001 RAL-531 1001 chr2R 25104758 25104807 chr2R 25104903 25104944 10 141 3.5 2.5 3.0 2.5 186 chr2R 25104758 intron lov - chr2R 25104851 intron lov - chr2R 25104944 intron lov - chr2R_10_25100001 chr2R_25100001 RAL-531 1002 chr2R 25130991 25131033 chr2R 25131088 25131128 13 96 5.0 4.5 4.8 2.2 137 chr2R 25130991 intron lov - chr2R 25131060 intron lov - chr2R 25131128 intron lov - chr2R_13_25130001 chr2R_25130001 RAL-531 1003 chr2R 25141635 25141677 chr2R 25159342 25159387 roo 15 17707 1.5 9.0 5.2 2.4 17752 chr2R 25141635 intergenic not near genes chr2R 25150511 intergenic not near genes chr2R 25159387 intergenic not near genes chr2R_15_25150001 chr2R_25150001 RAL-531 1004 chr2R 25171480 25171498 chr2R 25171577 25171595 5 97 6.0 5.5 5.8 0.7 115 chr2R 25171480 intergenic not near genes chr2R 25171538 intergenic not near genes chr2R 25171595 intergenic not near genes chr2R_5_25170001 chr2R_25170001 RAL-531 1005 chr2R 25171500 25171516 chr2R 25171576 25171613 6 92 3.0 5.5 4.2 1.2 113 chr2R 25171500 intergenic not near genes chr2R 25171556 intergenic not near genes chr2R 25171613 intergenic not near genes chr2R_6_25170001 chr2R_25170001 RAL-531 1006 chr2R 25191709 25191718 chr2R 25191807 25191816 4 98 5.5 3.5 4.5 0.7 107 chr2R 25191709 intron CG9380 - chr2R 25191762 intron CG9380 - chr2R 25191816 intron CG9380 - chr2R_4_25190001 chr2R_25190001 RAL-531 1007 chr2R 25193325 25193361 chr2R 25193486 25193525 8 161 5.0 1.0 3.0 2.0 200 chr2R 25193325 intron CG9380 - chr2R 25193425 intron CG9380 - chr2R 25193525 intron CG9380 - chr2R_8_25190001 chr2R_25190001 RAL-531 1008 chr2R 25243957 25244009 chr2R 25244053 25244107 20 94 4.0 3.5 3.8 4.2 150 chr2R 25243957 intron CG9380 - chr2R 25244032 intron CG9380 - chr2R 25244107 intron CG9380 - chr2R_20_25240001 chr2R_25240001 RAL-531 1009 chr2R 25253430 25253472 chr2R 25253524 25253543 7 86 3.5 3.0 3.2 1.7 113 chr2R 25253430 intron,intron CG9380 -,CG30428 + chr2R 25253486 intron,intron CG9380 -,CG30428 + chr2R 25253543 intron,intron CG9380 -,CG30428 + chr2R_7_25250001 chr2R_25250001 RAL-531 1010 chr3L 110200 110207 chr3L 119387 119388 roo 4 9185 13.0 8.0 10.5 0.3 9188 chr3L 110200 intergenic not near genes chr3L 114794 intergenic not near genes chr3L 119388 intergenic not near genes chr3L_4_110001 chr3L_110001 RAL-531 1011 chr3L 110208 110242 chr3L 119380 119429 roo 16 9184 6.0 6.5 6.2 2.2 9221 chr3L 110208 intergenic not near genes chr3L 114818 intergenic not near genes chr3L 119429 intergenic not near genes chr3L_16_110001 chr3L_110001 RAL-531 1012 chr3L 160212 160261 chr3L 160329 160383 6 111 1.5 3.0 2.2 1.9 171 chr3L 160212 intron p130CAS + chr3L 160298 intron p130CAS + chr3L 160383 intron p130CAS + chr3L_6_160001 chr3L_160001 RAL-531 1013 chr3L 365505 365556 chr3L 365611 365662 14 105 5.0 6.5 5.8 2.1 157 chr3L 365505 3` UTR CG1233 + chr3L 365584 3` UTR CG1233 + chr3L 365662 3` UTR CG1233 + chr3L_14_365001 chr3L_365001 RAL-531 1014 chr3L 402703 402717 chr3L 409741 409784 297 7 7064 2.5 3.5 3.0 1.8 7081 chr3L 402703 intergenic not near genes chr3L 406244 intergenic not near genes chr3L 409784 intergenic not near genes chr3L_7_405001 chr3L_405001 RAL-531 1015 chr3L 421036 421070 chr3L 421152 421178 9 114 4.5 2.0 3.2 2.1 142 chr3L 421036 intergenic not near genes chr3L 421107 intergenic not near genes chr3L 421178 intergenic not near genes chr3L_9_420001 chr3L_420001 RAL-531 1016 chr3L 477872 477899 chr3L 477974 477997 13 102 2.5 0.0 1.2 5.9 125 chr3L 477872 intron klar - chr3L 477934 intron klar - chr3L 477997 intron klar - chr3L_13_475001 chr3L_475001 RAL-531 1017 chr3L 603034 603051 chr3L 603137 603154 8 103 3.0 0.0 1.5 3.2 120 chr3L 603034 intron CG13893 - chr3L 603094 intron CG13893 - chr3L 603154 intron CG13893 - chr3L_8_600001 chr3L_600001 RAL-531 1018 chr3L 606873 606911 chr3L 606969 607010 9 95 0.0 3.0 1.5 3.6 137 chr3L 606873 intergenic Reg-2 - chr3L 606942 intergenic Reg-2 - chr3L 607010 intergenic Reg-2 - chr3L_9_605001 chr3L_605001 RAL-531 1019 chr3L 642455 642493 chr3L 642566 642604 8 110 7.0 6.5 6.8 1.0 149 chr3L 642455 5` UTR CR43334 + chr3L 642530 5` UTR CR43334 + chr3L 642604 5` UTR CR43334 + chr3L_8_640001 chr3L_640001 RAL-531 1020 chr3L 651376 651398 chr3L 651484 651500 6 106 5.5 7.5 6.5 0.8 124 chr3L 651376 intergenic Gale +,CG3402 - chr3L 651438 intergenic CG3402 -,Gale + chr3L 651500 intergenic CG3402 -,Gale + chr3L_6_650001 chr3L_650001 RAL-531 1021 chr3L 651400 651421 chr3L 651476 651512 8 95 4.0 6.5 5.2 1.3 112 chr3L 651400 intergenic Gale +,CG3402 - chr3L 651456 intergenic CG3402 -,Gale + chr3L 651512 intergenic CG3402 -,Gale + chr3L_8_650001 chr3L_650001 RAL-531 1022 chr3L 705235 705249 chr3L 705331 705344 5 96 2.0 2.5 2.2 1.6 109 chr3L 705235 intergenic CR44514 + chr3L 705290 intergenic CR44514 + chr3L 705344 5` UTR CR44514 + chr3L_5_705001 chr3L_705001 RAL-531 1023 chr3L 705879 705915 chr3L 705995 706031 17 115 5.5 7.5 6.5 2.3 152 chr3L 705879 intergenic CG13895 -,CR44514 + chr3L 705955 3` UTR CG13895 - chr3L 706031 3` UTR CG13895 - chr3L_17_705001 chr3L_705001 RAL-531 1024 chr3L 748194 748243 chr3L 748288 748341 14 98 4.0 5.0 4.5 2.5 147 chr3L 748194 intron hng3 - chr3L 748268 intron hng3 - chr3L 748341 intron hng3 - chr3L_14_745001 chr3L_745001 RAL-531 1025 chr3L 789894 789947 chr3L 790399 790444 roo 14 503 7.5 4.5 6.0 2.0 550 chr3L 789894 intergenic not near genes chr3L 790169 intergenic not near genes chr3L 790444 intergenic not near genes chr3L_14_790001 chr3L_790001 RAL-531 1026 chr3L 822078 822080 chr3L 822178 822179 4 100 0.0 5.5 2.8 1.1 101 chr3L 822078 intergenic not near genes chr3L 822128 intergenic not near genes chr3L 822179 intergenic not near genes chr3L_4_820001 chr3L_820001 RAL-531 1027 chr3L 858017 858029 chr3L 866480 866486 Tirant 4 8462 4.5 1.0 2.8 1.1 8469 chr3L 858017 intergenic not near genes chr3L 862252 intergenic not near genes chr3L 866486 intergenic CG12502 + chr3L_4_860001 chr3L_860001 RAL-531 1028 chr3L 925160 925177 chr3L 932606 932615 mdg1 5 7444 3.0 2.5 2.8 1.3 7455 chr3L 925160 intron Glut1 + chr3L 928888 intron Glut1 + chr3L 932615 intron Glut1 + chr3L_5_925001 chr3L_925001 RAL-531 1029 chr3L 925182 925208 chr3L 932602 932654 mdg1 12 7436 2.0 2.0 2.0 4.0 7472 chr3L 925182 intron Glut1 + chr3L 928918 intron Glut1 + chr3L 932654 intron Glut1 + chr3L_12_925001 chr3L_925001 RAL-531 1030 chr3L 933911 933944 chr3L 934014 934067 14 119 2.0 0.5 1.2 6.4 156 chr3L 933911 intron Glut1 + chr3L 933989 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_14_930001 chr3L_930001 RAL-531 1031 chr3L 939762 939799 chr3L 940903 940915 jockey 10 1138 1.5 6.0 3.8 2.1 1153 chr3L 939762 intron Glut1 + chr3L 940338 intron Glut1 + chr3L 940915 intron Glut1 + chr3L_10_940001 chr3L_940001 RAL-531 1032 chr3L 943834 943883 chr3L 943935 943984 8 96 2.0 1.0 1.5 3.2 150 chr3L 943834 intron Glut1 + chr3L 943909 intron Glut1 + chr3L 943984 intron Glut1 + chr3L_8_940001 chr3L_940001 RAL-531 1033 chr3L 949646 949672 chr3L 950038 950039 4 386 1.0 4.5 2.8 1.1 393 chr3L 949646 intron Glut1 + chr3L 949842 intron Glut1 + chr3L 950039 intron Glut1 + chr3L_4_945001 chr3L_945001 RAL-531 1034 chr3L 960997 961043 chr3L 961110 961156 20 112 2.0 7.5 4.8 3.4 159 chr3L 960997 intron Glut1 + chr3L 961076 intron Glut1 + chr3L 961156 intron Glut1 + chr3L_20_960001 chr3L_960001 RAL-531 1035 chr3L 967983 968011 chr3L 968081 968103 4 88 1.5 1.0 1.2 1.8 120 chr3L 967983 intron Glut1 + chr3L 968043 intron Glut1 + chr3L 968103 intron Glut1 + chr3L_4_965001 chr3L_965001 RAL-531 1036 chr3L 1003046 1003081 chr3L 1003143 1003177 7 97 1.0 7.5 4.2 1.3 131 chr3L 1003046 intron trio - chr3L 1003112 intron trio - chr3L 1003177 intron trio - chr3L_7_1000001 chr3L_1000001 RAL-531 1037 chr3L 1011020 1011028 chr3L 1011087 1011129 6 82 1.0 4.5 2.8 1.6 109 chr3L 1011020 intron trio - chr3L 1011074 intron trio - chr3L 1011129 intron trio - chr3L_6_1010001 chr3L_1010001 RAL-531 1038 chr3L 1028799 1028844 chr3L 1028905 1028949 14 103 2.0 4.5 3.2 3.3 150 chr3L 1028799 intron trio - chr3L 1028874 intron trio - chr3L 1028949 intron trio - chr3L_14_1025001 chr3L_1025001 RAL-531 1039 chr3L 1040539 1040578 chr3L 1040642 1040682 11 102 5.0 3.0 4.0 2.2 143 chr3L 1040539 intron bab1 - chr3L 1040610 intron bab1 - chr3L 1040682 intron bab1 - chr3L_11_1040001 chr3L_1040001 RAL-531 1040 chr3L 1042943 1042985 chr3L 1043041 1043083 16 98 5.0 2.0 3.5 3.6 140 chr3L 1042943 intron bab1 - chr3L 1043013 intron bab1 - chr3L 1043083 intron bab1 - chr3L_16_1040001 chr3L_1040001 RAL-531 1041 chr3L 1103973 1104013 chr3L 1104184 1104208 9 205 3.0 1.5 2.2 2.8 235 chr3L 1103973 intergenic not near genes chr3L 1104090 intergenic not near genes chr3L 1104208 intergenic not near genes chr3L_9_1100001 chr3L_1100001 RAL-531 1042 chr3L 1145230 1145258 chr3L 1145329 1145350 7 97 4.5 0.0 2.2 2.2 120 chr3L 1145230 intron bab2 - chr3L 1145290 intron bab2 - chr3L 1145350 intron bab2 - chr3L_7_1145001 chr3L_1145001 RAL-531 1043 chr3L 1154119 1154163 chr3L 1163289 1163333 roo 9 9165 1.5 1.0 1.2 4.1 9214 chr3L 1154119 intron bab2 - chr3L 1158726 intron bab2 - chr3L 1163333 intron bab2 - chr3L_9_1155001 chr3L_1155001 RAL-531 1044 chr3L 1219579 1219620 chr3L 1227332 1227340 412 6 7744 1.5 1.5 1.5 2.4 7761 chr3L 1219579 intron mwh + chr3L 1223460 intron mwh + chr3L 1227340 intron mwh + chr3L_6_1220001 chr3L_1220001 RAL-531 1045 chr3L 1347159 1347172 chr3L 1347250 1347271 5 93 2.0 4.5 3.2 1.2 112 chr3L 1347159 intron Ptp61F - chr3L 1347215 intron Ptp61F - chr3L 1347271 intron Ptp61F - chr3L_5_1345001 chr3L_1345001 RAL-531 1046 chr3L 1347173 1347187 chr3L 1347245 1347252 5 75 1.0 3.5 2.2 1.6 79 chr3L 1347173 intron Ptp61F - chr3L 1347212 intron Ptp61F - chr3L 1347252 intron Ptp61F - chr3L_5_1345001 chr3L_1345001 RAL-531 1047 chr3L 1372343 1372376 chr3L 1372441 1372474 11 98 3.0 4.0 3.5 2.4 131 chr3L 1372343 intron,intron Ptp61F -,ru + chr3L 1372408 intron,intron Ptp61F -,ru + chr3L 1372474 intron,intron Ptp61F -,ru + chr3L_11_1370001 chr3L_1370001 RAL-531 1048 chr3L 1506006 1506028 chr3L 1513603 1513644 17.6 13 7610 3.0 2.5 2.8 3.4 7638 chr3L 1506006 intron,intron Psa +,cue - chr3L 1509825 intron,intron Psa +,cue - chr3L 1513644 intron,intron Psa +,cue - chr3L_13_1505001 chr3L_1505001 RAL-531 1049 chr3L 1585919 1585932 chr3L 1586020 1586033 8 101 4.0 0.0 2.0 2.7 114 chr3L 1585919 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586033 intron CG13917 + chr3L_8_1585001 chr3L_1585001 RAL-531 1050 chr3L 1639210 1639242 chr3L 1639394 1639443 7 198 0.0 3.5 1.8 2.5 233 chr3L 1639210 5` UTR metl - chr3L 1639326 intergenic metl -,Bgb + chr3L 1639443 intergenic metl -,Bgb + chr3L_7_1635001 chr3L_1635001 RAL-531 1051 chr3L 1728537 1728552 chr3L 1728627 1728657 4 101 2.5 10.5 6.5 0.5 120 chr3L 1728537 intron drpr - chr3L 1728597 intron drpr - chr3L 1728657 intron drpr - chr3L_4_1725001 chr3L_1725001 RAL-531 1052 chr3L 1740838 1740887 chr3L 1741103 1741109 pogo 13 251 4.5 7.0 5.8 1.9 271 chr3L 1740838 intron Gk + chr3L 1740974 intron Gk + chr3L 1741109 intron Gk + chr3L_13_1740001 chr3L_1740001 RAL-531 1053 chr3L 1805685 1805705 chr3L 1805876 1805899 12 193 3.0 3.5 3.2 2.9 214 chr3L 1805685 exon CG42676 + chr3L 1805792 intron CG42676 + chr3L 1805899 intron CG42676 + chr3L_12_1805001 chr3L_1805001 RAL-531 1054 chr3L 1809984 1810029 chr3L 1810195 1810239 7 210 3.5 2.5 3.0 1.8 255 chr3L 1809984 intergenic not near genes chr3L 1810112 intergenic GV1 + chr3L 1810239 intergenic GV1 + chr3L_7_1810001 chr3L_1810001 RAL-531 1055 chr3L 1848626 1848664 chr3L 1848719 1848760 8 96 1.5 2.0 1.8 2.9 134 chr3L 1848626 intergenic not near genes chr3L 1848693 intergenic not near genes chr3L 1848760 intergenic not near genes chr3L_8_1845001 chr3L_1845001 RAL-531 1056 chr3L 2025522 2025546 chr3L 2025589 2025592 12 71 1.5 2.5 2.0 4.0 70 chr3L 2025522 intergenic not near genes chr3L 2025557 intergenic not near genes chr3L 2025592 intergenic not near genes chr3L_12_2025001 chr3L_2025001 RAL-531 1057 chr3L 2108233 2108275 chr3L 2113457 2113499 copia 13 5224 5.0 5.0 5.0 2.2 5266 chr3L 2108233 intron sls - chr3L 2110866 intron sls - chr3L 2113499 intron sls - chr3L_13_2110001 chr3L_2110001 RAL-531 1058 chr3L 2139190 2139204 chr3L 2139291 2139296 4 99 9.5 4.5 7.0 0.5 106 chr3L 2139190 intron zormin - chr3L 2139243 intron zormin - chr3L 2139296 intron zormin - chr3L_4_2135001 chr3L_2135001 RAL-531 1059 chr3L 2139209 2139224 chr3L 2139290 2139313 5 94 6.5 4.0 5.2 0.8 104 chr3L 2139209 intron zormin - chr3L 2139261 intron zormin - chr3L 2139313 intron zormin - chr3L_5_2135001 chr3L_2135001 RAL-531 1060 chr3L 2163952 2164102 chr3L 2164064 2164269 9 147 0.5 0.0 0.2 7.5 317 chr3L 2163952 intergenic CG15822 - chr3L 2164110 intergenic CG15822 - chr3L 2164269 intergenic CG15822 - chr3L_9_2160001 chr3L_2160001 RAL-531 1061 chr3L 2168757 2168797 chr3L 2168868 2168908 8 106 1.0 1.5 1.2 3.6 151 chr3L 2168757 exon CG15879 - chr3L 2168832 intron CG15879 - chr3L 2168908 intron CG15879 - chr3L_8_2165001 chr3L_2165001 RAL-531 1062 chr3L 2277967 2278006 chr3L 2278171 2278222 12 214 2.0 2.5 2.2 3.8 255 chr3L 2277967 3` UTR yellow-g2 + chr3L 2278094 intergenic yellow-g2 + chr3L 2278222 intergenic yellow-g2 + chr3L_12_2275001 chr3L_2275001 RAL-531 1063 chr3L 2290243 2290265 chr3L 2290346 2290361 5 102 0.0 7.0 3.5 1.1 118 chr3L 2290243 intron MsR2 + chr3L 2290302 intron MsR2 + chr3L 2290361 intron MsR2 + chr3L_5_2290001 chr3L_2290001 RAL-531 1064 chr3L 2307989 2308029 chr3L 2308109 2308132 10 119 5.0 3.5 4.2 1.9 143 chr3L 2307989 intergenic not near genes chr3L 2308060 intergenic not near genes chr3L 2308132 intergenic not near genes chr3L_10_2305001 chr3L_2305001 RAL-531 1065 chr3L 2447484 2447535 chr3L 2456660 2456704 roo 10 9171 1.5 2.5 2.0 3.3 9220 chr3L 2447484 intron CG45186 + chr3L 2452094 intron CG45186 + chr3L 2456704 intron CG45186 + chr3L_10_2450001 chr3L_2450001 RAL-531 1066 chr3L 2459122 2459163 chr3L 2459302 2459344 10 179 6.0 6.5 6.2 1.4 222 chr3L 2459122 intron CG45186 + chr3L 2459233 intron CG45186 + chr3L 2459344 intron CG45186 + chr3L_10_2455001 chr3L_2455001 RAL-531 1067 chr3L 2467428 2467483 chr3L 2467545 2467600 7 115 7.0 0.0 3.5 1.6 172 chr3L 2467428 intron CG45186 + chr3L 2467514 intron CG45186 + chr3L 2467600 intron CG45186 + chr3L_7_2465001 chr3L_2465001 RAL-531 1068 chr3L 2478878 2479035 chr3L 2478972 2479142 10 108 2.5 2.5 2.5 2.9 264 chr3L 2478878 intron CG45186 + chr3L 2479010 intron CG45186 + chr3L 2479142 intron CG45186 + chr3L_10_2475001 chr3L_2475001 RAL-531 1069 chr3L 2493802 2493849 chr3L 2493900 2493957 9 105 0.5 0.0 0.2 7.5 155 chr3L 2493802 intron CG45186 + chr3L 2493880 intron CG45186 + chr3L 2493957 intron CG45186 + chr3L_9_2490001 chr3L_2490001 RAL-531 1070 chr3L 2561510 2561557 chr3L 2561607 2561639 15 95 5.0 2.0 3.5 3.3 129 chr3L 2561510 intron msn - chr3L 2561574 intron msn - chr3L 2561639 intron msn - chr3L_15_2560001 chr3L_2560001 RAL-531 1071 chr3L 2581898 2581914 chr3L 2582011 2582028 5 114 0.0 6.0 3.0 1.2 130 chr3L 2581898 intron msn - chr3L 2581963 intron msn - chr3L 2582028 intron msn - chr3L_5_2580001 chr3L_2580001 RAL-531 1072 chr3L 2631043 2631094 chr3L 2631173 2631173 13 116 2.5 4.0 3.2 3.1 130 chr3L 2631043 intergenic CR45660 - chr3L 2631108 intergenic CR45660 - chr3L 2631173 intergenic CR45660 - chr3L_13_2630001 chr3L_2630001 RAL-531 1073 chr3L 2683926 2683955 chr3L 2684022 2684051 10 96 6.5 3.5 5.0 1.7 125 chr3L 2683926 intron Fife - chr3L 2683988 intron Fife - chr3L 2684051 intron Fife - chr3L_10_2680001 chr3L_2680001 RAL-531 1074 chr3L 2710996 2711033 chr3L 2711113 2711135 18 115 7.0 3.0 5.0 3.0 139 chr3L 2710996 intron Fife - chr3L 2711066 intron Fife - chr3L 2711135 intron Fife - chr3L_18_2710001 chr3L_2710001 RAL-531 1075 chr3L 2719520 2719559 chr3L 2719642 2719679 17 121 7.5 5.5 6.5 2.3 159 chr3L 2719520 3` UTR Mrtf - chr3L 2719600 3` UTR Mrtf - chr3L 2719679 3` UTR Mrtf - chr3L_17_2715001 chr3L_2715001 RAL-531 1076 chr3L 2751437 2751466 chr3L 2755752 2755769 F-element 5 4310 8.0 6.0 7.0 0.6 4332 chr3L 2751437 intron Mrtf - chr3L 2753603 intron Mrtf - chr3L 2755769 intron Mrtf - chr3L_5_2750001 chr3L_2750001 RAL-531 1077 chr3L 2795706 2795749 chr3L 2795849 2795892 5 143 2.0 4.0 3.0 1.2 186 chr3L 2795706 intron CG43444 - chr3L 2795799 intron CG43444 - chr3L 2795892 intron CG43444 - chr3L_5_2795001 chr3L_2795001 RAL-531 1078 chr3L 2857369 2857395 chr3L 2857451 2857483 6 80 3.0 2.0 2.5 1.7 114 chr3L 2857369 intron CG43444 - chr3L 2857426 intron CG43444 - chr3L 2857483 intron CG43444 - chr3L_6_2855001 chr3L_2855001 RAL-531 1079 chr3L 2966701 2966716 chr3L 2974145 2974160 mdg1 9 7445 5.0 3.0 4.0 1.8 7459 chr3L 2966701 intergenic not near genes chr3L 2970430 intergenic not near genes chr3L 2974160 intergenic not near genes chr3L_9_2970001 chr3L_2970001 RAL-531 1080 chr3L 3040307 3040331 chr3L 3042115 3042132 S-element 12 1808 8.5 0.5 4.5 2.2 1825 chr3L 3040307 3` UTR CG2162 + chr3L 3041220 intergenic not near genes chr3L 3042132 intergenic Jafrac2 + chr3L_12_3040001 chr3L_3040001 RAL-531 1081 chr3L 3051723 3051750 chr3L 3051985 3052012 pogo 9 262 11.0 2.0 6.5 1.2 289 chr3L 3051723 3` UTR CG32485 + chr3L 3051868 intergenic CG32485 + chr3L 3052012 intergenic CG32485 + chr3L_9_3050001 chr3L_3050001 RAL-531 1082 chr3L 3103430 3103465 chr3L 3103526 3103561 4 96 7.5 3.0 5.2 0.6 131 chr3L 3103430 intron Cht7 - chr3L 3103496 intron Cht7 - chr3L 3103561 intron Cht7 - chr3L_4_3100001 chr3L_3100001 RAL-531 1083 chr3L 3252320 3252357 chr3L 3252416 3252453 8 96 8.5 2.0 5.2 1.3 133 chr3L 3252320 5` UTR CR43626 + chr3L 3252386 5` UTR CR43626 + chr3L 3252453 5` UTR CR43626 + chr3L_8_3250001 chr3L_3250001 RAL-531 1084 chr3L 3269081 3269124 chr3L 3269192 3269235 7 110 0.0 3.0 1.5 2.8 154 chr3L 3269081 intergenic CG34265 + chr3L 3269158 intergenic CG34265 + chr3L 3269235 intergenic CG34265 + chr3L_7_3265001 chr3L_3265001 RAL-531 1085 chr3L 3281433 3281472 chr3L 3281942 3281987 Doc 4 512 0.0 4.0 2.0 1.3 554 chr3L 3281433 intron CG12017 + chr3L 3281710 intron CG12017 + chr3L 3281987 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-531 1086 chr3L 3307404 3307416 chr3L 3307503 3307516 5 99 4.0 4.5 4.2 1.0 112 chr3L 3307404 intron ZnT63C + chr3L 3307460 intron ZnT63C + chr3L 3307516 intron ZnT63C + chr3L_5_3305001 chr3L_3305001 RAL-531 1087 chr3L 3307421 3307445 chr3L 3307498 3307545 13 95 2.0 4.5 3.2 3.1 124 chr3L 3307421 intron ZnT63C + chr3L 3307483 intron ZnT63C + chr3L 3307545 intron ZnT63C + chr3L_13_3305001 chr3L_3305001 RAL-531 1088 chr3L 3436274 3436299 chr3L 3436373 3436397 7 99 10.0 5.0 7.5 0.8 123 chr3L 3436274 intron eIF5B - chr3L 3436336 intron eIF5B - chr3L 3436397 intron eIF5B - chr3L_7_3435001 chr3L_3435001 RAL-531 1089 chr3L 3470140 3470186 chr3L 3470236 3470282 11 96 0.0 2.0 1.0 5.5 142 chr3L 3470140 intron CG14971 - chr3L 3470211 intron CG14971 - chr3L 3470282 intron CG14971 - chr3L_11_3470001 chr3L_3470001 RAL-531 1090 chr3L 3475068 3475102 chr3L 3475522 3475557 jockey 6 459 1.0 3.0 2.0 2.0 489 chr3L 3475068 intron CG42324 + chr3L 3475312 intron CG42324 + chr3L 3475557 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-531 1091 chr3L 3512941 3512979 chr3L 3513041 3513079 7 99 5.0 4.5 4.8 1.2 138 chr3L 3512941 intergenic ImpE2 - chr3L 3513010 intergenic ImpE2 - chr3L 3513079 intergenic ImpE2 - chr3L_7_3510001 chr3L_3510001 RAL-531 1092 chr3L 3517991 3518012 chr3L 3518093 3518096 4 93 2.5 0.5 1.5 1.6 105 chr3L 3517991 intron Eip63E + chr3L 3518044 intron Eip63E + chr3L 3518096 intron Eip63E + chr3L_4_3515001 chr3L_3515001 RAL-531 1093 chr3L 3544388 3544417 chr3L 3544509 3544547 13 128 0.0 3.0 1.5 5.2 159 chr3L 3544388 intron Eip63E + chr3L 3544468 intron Eip63E + chr3L 3544547 intron Eip63E + chr3L_13_3540001 chr3L_3540001 RAL-531 1094 chr3L 3548697 3548717 chr3L 3548839 3548859 5 142 1.0 2.0 1.5 2.0 162 chr3L 3548697 intron Eip63E + chr3L 3548778 intron Eip63E + chr3L 3548859 intron Eip63E + chr3L_5_3545001 chr3L_3545001 RAL-531 1095 chr3L 3601289 3601317 chr3L 3606610 3606621 copia 6 5324 5.0 3.0 4.0 1.2 5332 chr3L 3601289 intron Eip63E + chr3L 3603955 intron Eip63E + chr3L 3606621 intron Eip63E + chr3L_6_3600001 chr3L_3600001 RAL-531 1096 chr3L 3619382 3619431 chr3L 3619496 3619526 15 112 1.5 4.5 3.0 3.8 144 chr3L 3619382 intergenic not near genes chr3L 3619454 intergenic not near genes chr3L 3619526 intergenic not near genes chr3L_15_3615001 chr3L_3615001 RAL-531 1097 chr3L 3627328 3627349 chr3L 3627440 3627461 7 111 9.0 0.0 4.5 1.3 133 chr3L 3627328 intron dar1 + chr3L 3627394 intron dar1 + chr3L 3627461 intron dar1 + chr3L_7_3625001 chr3L_3625001 RAL-531 1098 chr3L 3648477 3648499 chr3L 3648561 3648583 5 91 3.5 2.0 2.8 1.3 106 chr3L 3648477 intron dar1 + chr3L 3648530 intron dar1 + chr3L 3648583 intron dar1 + chr3L_5_3645001 chr3L_3645001 RAL-531 1099 chr3L 3665579 3665596 chr3L 3665667 3665693 4 95 2.0 5.0 3.5 0.9 114 chr3L 3665579 intergenic not near genes chr3L 3665636 intergenic not near genes chr3L 3665693 intergenic not near genes chr3L_4_3665001 chr3L_3665001 RAL-531 1100 chr3L 3665598 3665613 chr3L 3665663 3665710 4 79 3.5 5.0 4.2 0.8 112 chr3L 3665598 intergenic not near genes chr3L 3665654 intergenic not near genes chr3L 3665710 intergenic not near genes chr3L_4_3665001 chr3L_3665001 RAL-531 1101 chr3L 3709443 3709458 chr3L 3709545 3709560 8 102 1.0 0.0 0.5 5.3 117 chr3L 3709443 intergenic CR45675 + chr3L 3709502 intergenic not near genes chr3L 3709560 intergenic not near genes chr3L_8_3705001 chr3L_3705001 RAL-531 1102 chr3L 3763742 3763754 chr3L 3763843 3763855 6 98 1.0 1.0 1.0 3.0 113 chr3L 3763742 intron CG32264 - chr3L 3763798 intron CG32264 - chr3L 3763855 intron CG32264 - chr3L_6_3760001 chr3L_3760001 RAL-531 1103 chr3L 3766717 3766744 chr3L 3766823 3766850 10 106 5.0 0.0 2.5 2.9 133 chr3L 3766717 intron CG32264 - chr3L 3766784 intron CG32264 - chr3L 3766850 intron CG32264 - chr3L_10_3765001 chr3L_3765001 RAL-531 1104 chr3L 3795575 3795625 chr3L 3795672 3795721 20 93 6.0 5.5 5.8 2.9 146 chr3L 3795575 intron CG32264 - chr3L 3795648 intron CG32264 - chr3L 3795721 intron CG32264 - chr3L_20_3795001 chr3L_3795001 RAL-531 1105 chr3L 3797226 3797265 chr3L 3797329 3797367 16 102 0.5 3.0 1.8 5.7 141 chr3L 3797226 intron CG32264 - chr3L 3797296 intron CG32264 - chr3L 3797367 intron CG32264 - chr3L_16_3795001 chr3L_3795001 RAL-531 1106 chr3L 3833722 3833759 chr3L 3833983 3833998 pogo 8 258 2.5 0.5 1.5 3.2 276 chr3L 3833722 intron enc + chr3L 3833860 intron enc + chr3L 3833998 intron enc + chr3L_8_3830001 chr3L_3830001 RAL-531 1107 chr3L 3877441 3877467 chr3L 3877584 3877610 7 140 0.0 3.5 1.8 2.5 169 chr3L 3877441 intergenic not near genes chr3L 3877526 intergenic not near genes chr3L 3877610 intergenic not near genes chr3L_7_3875001 chr3L_3875001 RAL-531 1108 chr3L 3912789 3912809 chr3L 3912894 3912919 5 103 4.0 0.5 2.2 1.6 130 chr3L 3912789 intron Eip63F-1 - chr3L 3912854 intron Eip63F-1 - chr3L 3912919 intron Eip63F-1 - chr3L_5_3910001 chr3L_3910001 RAL-531 1109 chr3L 3968034 3968054 chr3L 3968128 3968153 5 98 5.0 0.5 2.8 1.3 119 chr3L 3968034 intergenic not near genes chr3L 3968094 intergenic not near genes chr3L 3968153 intergenic not near genes chr3L_5_3965001 chr3L_3965001 RAL-531 1110 chr3L 4015725 4015765 chr3L 4015818 4015868 14 100 2.0 1.5 1.8 5.0 143 chr3L 4015725 intergenic not near genes chr3L 4015796 intergenic not near genes chr3L 4015868 intergenic not near genes chr3L_14_4015001 chr3L_4015001 RAL-531 1111 chr3L 4070826 4070847 chr3L 4070904 4070947 4 92 1.5 2.5 2.0 1.3 121 chr3L 4070826 intron wit - chr3L 4070886 intron wit - chr3L 4070947 intron wit - chr3L_4_4070001 chr3L_4070001 RAL-531 1112 chr3L 4099465 4099493 chr3L 4099565 4099585 14 100 3.5 4.0 3.8 2.9 120 chr3L 4099465 intron CG14995 - chr3L 4099525 intron CG14995 - chr3L 4099585 intron CG14995 - chr3L_14_4095001 chr3L_4095001 RAL-531 1113 chr3L 4146812 4146840 chr3L 4146897 4146942 13 101 0.0 4.0 2.0 4.3 130 chr3L 4146812 intergenic not near genes chr3L 4146877 intergenic not near genes chr3L 4146942 intergenic not near genes chr3L_13_4145001 chr3L_4145001 RAL-531 1114 chr3L 4187308 4187357 chr3L 4187491 4187520 12 180 3.0 5.0 4.0 2.4 212 chr3L 4187308 intron,intron CG18675 +,Teh2 - chr3L 4187414 intron,intron CG18675 +,Teh2 - chr3L 4187520 intron,intron CG18675 +,Teh2 - chr3L_12_4185001 chr3L_4185001 RAL-531 1115 chr3L 4328743 4328765 chr3L 4336260 4336282 412 7 7516 1.0 4.5 2.8 1.8 7539 chr3L 4328743 intron Cip4 - chr3L 4332512 intron Cip4 - chr3L 4336282 exon Cip4 - chr3L_7_4330001 chr3L_4330001 RAL-531 1116 chr3L 4341330 4341333 chr3L 21448026 21448027 7 17106695 19.5 14.0 16.8 0.4 17106697 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_7_12890001 chr3L_12890001 RAL-531 1117 chr3L 4364201 4364234 chr3L 4364310 4364343 10 109 1.0 3.0 2.0 3.3 142 chr3L 4364201 intergenic Cip4 -,mRpS6 + chr3L 4364272 intergenic Cip4 -,mRpS6 + chr3L 4364343 intergenic mRpS6 +,Cip4 - chr3L_10_4360001 chr3L_4360001 RAL-531 1118 chr3L 4484703 4484751 chr3L 4484799 4484849 10 98 2.0 3.5 2.8 2.6 146 chr3L 4484703 intergenic CG11350 +,CG13722 - chr3L 4484776 intergenic CG13722 -,CG11350 + chr3L 4484849 intergenic CG13722 -,CG11350 + chr3L_10_4480001 chr3L_4480001 RAL-531 1119 chr3L 4497643 4497670 chr3L 4497736 4497760 6 92 3.5 0.5 2.0 2.0 117 chr3L 4497643 exon CG13721 - chr3L 4497702 5` UTR CG13721 - chr3L 4497760 5` UTR CG13721 - chr3L_6_4495001 chr3L_4495001 RAL-531 1120 chr3L 4516521 4516566 chr3L 4516934 4516979 7 405 4.0 1.5 2.8 1.8 458 chr3L 4516521 intron Tie - chr3L 4516750 intron Tie - chr3L 4516979 intron Tie - chr3L_7_4515001 chr3L_4515001 RAL-531 1121 chr3L 4572410 4572442 chr3L 4572592 4572625 10 181 4.5 0.5 2.5 2.9 215 chr3L 4572410 intron CG42540 + chr3L 4572518 intron CG42540 + chr3L 4572625 intron CG42540 + chr3L_10_4570001 chr3L_4570001 RAL-531 1122 chr3L 4573716 4573757 chr3L 4573821 4573863 21 106 0.5 3.0 1.8 7.5 147 chr3L 4573716 intron CG42540 + chr3L 4573790 intron CG42540 + chr3L 4573863 intron CG42540 + chr3L_21_4570001 chr3L_4570001 RAL-531 1123 chr3L 4652550 4652599 chr3L 4652653 4652703 10 101 1.5 1.0 1.2 4.5 153 chr3L 4652550 intron axo - chr3L 4652626 intron axo - chr3L 4652703 intron axo - chr3L_10_4650001 chr3L_4650001 RAL-531 1124 chr3L 4676017 4676053 chr3L 4676118 4676154 10 101 4.0 2.0 3.0 2.5 137 chr3L 4676017 intron axo - chr3L 4676086 intron axo - chr3L 4676154 intron axo - chr3L_10_4675001 chr3L_4675001 RAL-531 1125 chr3L 4719660 4719689 chr3L 4719798 4719827 4 135 3.5 4.0 3.8 0.8 167 chr3L 4719660 intron RhoGEF64C + chr3L 4719744 intron RhoGEF64C + chr3L 4719827 intron RhoGEF64C + chr3L_4_4715001 chr3L_4715001 RAL-531 1126 chr3L 4837866 4837921 chr3L 4837965 4838020 18 98 6.5 4.5 5.5 2.8 154 chr3L 4837866 3` UTR CG13707 - chr3L 4837943 3` UTR CG13707 - chr3L 4838020 3` UTR CG13707 - chr3L_18_4835001 chr3L_4835001 RAL-531 1127 chr3L 4858298 4858333 chr3L 4858395 4858408 8 87 3.5 2.5 3.0 2.0 110 chr3L 4858298 intergenic not near genes chr3L 4858353 intergenic not near genes chr3L 4858408 intergenic not near genes chr3L_8_4855001 chr3L_4855001 RAL-531 1128 chr3L 4901110 4901151 chr3L 4907320 4907334 diver 6 6205 3.5 1.5 2.5 1.7 6224 chr3L 4901110 intergenic CG13704 + chr3L 4904222 intergenic not near genes chr3L 4907334 intergenic not near genes chr3L_6_4900001 chr3L_4900001 RAL-531 1129 chr3L 4958417 4958432 chr3L 4958520 4958528 4 100 5.5 7.5 6.5 0.5 111 chr3L 4958417 intron Con - chr3L 4958472 intron Con - chr3L 4958528 intron Con - chr3L_4_4955001 chr3L_4955001 RAL-531 1130 chr3L 4958440 4958447 chr3L 4958502 4958555 8 95 3.0 3.5 3.2 1.9 115 chr3L 4958440 intron Con - chr3L 4958498 intron Con - chr3L 4958555 intron Con - chr3L_8_4955001 chr3L_4955001 RAL-531 1131 chr3L 5034137 5034177 chr3L 5043309 5043349 roo 5 9167 4.5 0.0 2.2 1.6 9212 chr3L 5034137 intron Con - chr3L 5038743 intron Con - chr3L 5043349 intron Con - chr3L_5_5035001 chr3L_5035001 RAL-531 1132 chr3L 5066311 5066326 chr3L 5066429 5066445 9 119 5.5 9.5 7.5 1.1 134 chr3L 5066311 intron Con - chr3L 5066378 intron Con - chr3L 5066445 intron Con - chr3L_9_5065001 chr3L_5065001 RAL-531 1133 chr3L 5101181 5101231 chr3L 5101280 5101331 10 98 1.5 4.0 2.8 2.6 150 chr3L 5101181 intergenic not near genes chr3L 5101256 intergenic not near genes chr3L 5101331 intergenic not near genes chr3L_10_5100001 chr3L_5100001 RAL-531 1134 chr3L 5104465 5104511 chr3L 5124619 5124665 20 20153 3.0 1.5 2.2 6.2 20200 chr3L 5104465 intergenic not near genes chr3L 5114565 intergenic not near genes chr3L 5124665 intergenic not near genes chr3L_20_5110001 chr3L_5110001 RAL-531 1135 chr3L 5212229 5212269 chr3L 5212320 5212328 7 80 2.5 3.0 2.8 1.8 99 chr3L 5212229 intron shep - chr3L 5212278 intron shep - chr3L 5212328 intron shep - chr3L_7_5210001 chr3L_5210001 RAL-531 1136 chr3L 5226507 5226527 chr3L 5226628 5226649 5 120 2.0 9.0 5.5 0.8 142 chr3L 5226507 intron shep - chr3L 5226578 intron shep - chr3L 5226649 intron shep - chr3L_5_5225001 chr3L_5225001 RAL-531 1137 chr3L 5261148 5261176 chr3L 5261247 5261275 9 99 3.5 5.5 4.5 1.6 127 chr3L 5261148 intron shep - chr3L 5261212 intron shep - chr3L 5261275 intron shep - chr3L_9_5260001 chr3L_5260001 RAL-531 1138 chr3L 5299152 5299170 chr3L 5306598 5306616 Quasimodo 4 7446 3.0 0.0 1.5 1.6 7464 chr3L 5299152 intergenic not near genes chr3L 5302884 intergenic not near genes chr3L 5306616 intergenic not near genes chr3L_4_5300001 chr3L_5300001 RAL-531 1139 chr3L 5327444 5327474 chr3L 5327549 5327579 9 105 3.0 2.5 2.8 2.4 135 chr3L 5327444 intergenic not near genes chr3L 5327512 intergenic not near genes chr3L 5327579 intergenic not near genes chr3L_9_5325001 chr3L_5325001 RAL-531 1140 chr3L 5351085 5351135 chr3L 5351190 5351240 11 105 6.5 4.0 5.2 1.8 155 chr3L 5351085 intron lama - chr3L 5351162 intron lama - chr3L 5351240 intron lama - chr3L_11_5350001 chr3L_5350001 RAL-531 1141 chr3L 5387676 5387689 chr3L 5387922 5387942 4 251 0.5 4.0 2.2 1.2 266 chr3L 5387676 intergenic not near genes chr3L 5387809 intergenic not near genes chr3L 5387942 intergenic not near genes chr3L_4_5385001 chr3L_5385001 RAL-531 1142 chr3L 5416450 5416494 chr3L 5416558 5416601 22 106 3.0 4.0 3.5 4.9 151 chr3L 5416450 intergenic not near genes chr3L 5416526 intergenic not near genes chr3L 5416601 intergenic not near genes chr3L_22_5415001 chr3L_5415001 RAL-531 1143 chr3L 5484748 5484796 chr3L 5485100 5485148 22 350 5.0 2.5 3.8 4.6 400 chr3L 5484748 intergenic not near genes chr3L 5484948 intergenic not near genes chr3L 5485148 intergenic not near genes chr3L_22_5480001 chr3L_5480001 RAL-531 1144 chr3L 5504544 5504569 chr3L 5504638 5504667 4 97 3.5 2.5 3.0 1.0 123 chr3L 5504544 intron CG34342 - chr3L 5504606 intron CG34342 - chr3L 5504667 intron CG34342 - chr3L_4_5500001 chr3L_5500001 RAL-531 1145 chr3L 5516419 5516440 chr3L 5516509 5516536 4 96 3.0 0.5 1.8 1.4 117 chr3L 5516419 intron Lkr - chr3L 5516478 intron Lkr - chr3L 5516536 intron Lkr - chr3L_4_5515001 chr3L_5515001 RAL-531 1146 chr3L 5519601 5519648 chr3L 5519710 5519749 9 108 3.0 1.0 2.0 3.0 148 chr3L 5519601 intron Lkr - chr3L 5519675 intron Lkr - chr3L 5519749 intron Lkr - chr3L_9_5515001 chr3L_5515001 RAL-531 1147 chr3L 5537704 5537739 chr3L 5538065 5538080 jockey 8 358 3.5 6.0 4.8 1.4 376 chr3L 5537704 intergenic not near genes chr3L 5537892 intergenic not near genes chr3L 5538080 intergenic CG10625 - chr3L_8_5535001 chr3L_5535001 RAL-531 1148 chr3L 5537741 5537753 chr3L 5538064 5538115 jockey 5 354 2.0 6.0 4.0 1.0 374 chr3L 5537741 intergenic not near genes chr3L 5537928 intergenic CG10625 - chr3L 5538115 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 RAL-531 1149 chr3L 5581991 5582003 chr3L 5582088 5582100 7 96 6.0 0.0 3.0 1.8 109 chr3L 5581991 intergenic not near genes chr3L 5582046 intergenic not near genes chr3L 5582100 intergenic not near genes chr3L_7_5580001 chr3L_5580001 RAL-531 1150 chr3L 5622462 5622474 chr3L 5622562 5622574 4 99 1.0 1.0 1.0 2.0 112 chr3L 5622462 intergenic not near genes chr3L 5622518 intergenic not near genes chr3L 5622574 intergenic not near genes chr3L_4_5620001 chr3L_5620001 RAL-531 1151 chr3L 5666265 5666319 chr3L 5666377 5666423 7 106 0.0 1.0 0.5 4.7 158 chr3L 5666265 intron sif + chr3L 5666344 intron sif + chr3L 5666423 intron sif + chr3L_7_5665001 chr3L_5665001 RAL-531 1152 chr3L 5841413 5841441 chr3L 5841495 5841521 4 89 1.0 4.5 2.8 1.1 108 chr3L 5841413 intron vn - chr3L 5841467 intron vn - chr3L 5841521 intron vn - chr3L_4_5840001 chr3L_5840001 RAL-531 1153 chr3L 5869858 5869883 chr3L 5869957 5869964 8 97 0.0 2.5 1.2 3.6 106 chr3L 5869858 intergenic not near genes chr3L 5869911 intergenic not near genes chr3L 5869964 intergenic not near genes chr3L_8_5865001 chr3L_5865001 RAL-531 1154 chr3L 5908057 5908106 chr3L 5908157 5908204 14 100 0.0 2.0 1.0 7.0 147 chr3L 5908057 intron CG13288 + chr3L 5908130 intron CG13288 + chr3L 5908204 intron CG13288 + chr3L_14_5905001 chr3L_5905001 RAL-531 1155 chr3L 5910011 5910059 chr3L 5910272 5910320 pogo 21 261 4.5 2.5 3.5 4.7 309 chr3L 5910011 intron CG13288 + chr3L 5910166 intron CG13288 + chr3L 5910320 intron CG13288 + chr3L_21_5910001 chr3L_5910001 RAL-531 1156 chr3L 5926333 5926350 chr3L 5926507 5926510 BS 5 180 1.5 2.5 2.0 1.7 177 chr3L 5926333 intron Vap-33B + chr3L 5926422 intron Vap-33B + chr3L 5926510 intron Vap-33B + chr3L_5_5925001 chr3L_5925001 RAL-531 1157 chr3L 5953044 5953057 chr3L 5955657 5955669 9 2614 28.5 18.5 23.5 0.4 2625 chr3L 5953044 intergenic not near genes chr3L 5954356 intergenic not near genes chr3L 5955669 intergenic not near genes chr3L_9_5950001 chr3L_5950001 RAL-531 1158 chr3L 5953042 5953066 chr3L 5955671 5955678 4 2616 30.0 13.5 21.8 0.2 2636 chr3L 5953042 intergenic not near genes chr3L 5954360 intergenic not near genes chr3L 5955678 intergenic not near genes chr3L_4_5950001 chr3L_5950001 RAL-531 1159 chr3L 6001665 6001714 chr3L 6004385 6004434 jockey 13 2719 4.5 1.5 3.0 3.2 2769 chr3L 6001665 intron PVRAP + chr3L 6003050 intron PVRAP + chr3L 6004434 intron PVRAP + chr3L_13_6000001 chr3L_6000001 RAL-531 1160 chr3L 6096803 6096851 chr3L 6096914 6096955 7 108 3.0 7.0 5.0 1.2 152 chr3L 6096803 intergenic loj + chr3L 6096879 intergenic loj + chr3L 6096955 intergenic loj + chr3L_7_6095001 chr3L_6095001 RAL-531 1161 chr3L 6119135 6119157 chr3L 6119232 6119254 11 96 0.5 0.0 0.2 9.2 119 chr3L 6119135 exon Ets65A + chr3L 6119194 intron Ets65A + chr3L 6119254 intron Ets65A + chr3L_11_6115001 chr3L_6115001 RAL-531 1162 chr3L 6127825 6127862 chr3L 6128279 6128308 10 451 3.5 4.5 4.0 2.0 483 chr3L 6127825 intron l(3)mbn - chr3L 6128066 intron l(3)mbn - chr3L 6128308 intron l(3)mbn - chr3L_10_6125001 chr3L_6125001 RAL-531 1163 chr3L 6169109 6169134 chr3L 6169210 6169235 10 101 7.0 7.0 7.0 1.2 126 chr3L 6169109 3` UTR CG10289 - chr3L 6169172 3` UTR CG10289 - chr3L 6169235 3` UTR CG10289 - chr3L_10_6165001 chr3L_6165001 RAL-531 1164 chr3L 6220901 6220945 chr3L 6230073 6230097 roo 9 9167 2.5 5.5 4.0 1.8 9196 chr3L 6220901 5` UTR pncr008:3L + chr3L 6225499 intergenic not near genes chr3L 6230097 intergenic not near genes chr3L_9_6225001 chr3L_6225001 RAL-531 1165 chr3L 6231145 6231372 chr3L 6231246 6231453 20 102 3.5 6.5 5.0 3.3 308 chr3L 6231145 intergenic not near genes chr3L 6231299 intergenic not near genes chr3L 6231453 intergenic CG13299 - chr3L_20_6230001 chr3L_6230001 RAL-531 1166 chr3L 6273864 6273891 chr3L 6274045 6274063 5 175 4.0 3.0 3.5 1.1 199 chr3L 6273864 intergenic not near genes chr3L 6273964 intergenic not near genes chr3L 6274063 intergenic not near genes chr3L_5_6270001 chr3L_6270001 RAL-531 1167 chr3L 6324905 6324938 chr3L 6325016 6325055 8 109 1.5 2.5 2.0 2.7 150 chr3L 6324905 intergenic not near genes chr3L 6324980 intergenic not near genes chr3L 6325055 intergenic not near genes chr3L_8_6320001 chr3L_6320001 RAL-531 1168 chr3L 6335013 6335041 chr3L 6335493 6335532 297 9 486 1.0 3.0 2.0 3.0 519 chr3L 6335013 intron CG13300 - chr3L 6335272 intron CG13300 - chr3L 6335532 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-531 1169 chr3L 6405643 6405687 chr3L 6432127 6432171 roo 21 26484 4.0 6.5 5.2 3.4 26528 chr3L 6405643 intron CG42747 + chr3L 6418907 intron CG42747 + chr3L 6432171 intron CG42747 + chr3L_21_6415001 chr3L_6415001 RAL-531 1170 chr3L 6637095 6637136 chr3L 6637196 6637237 7 90 5.0 2.0 3.5 1.6 142 chr3L 6637095 intergenic not near genes chr3L 6637166 intergenic not near genes chr3L 6637237 intergenic not near genes chr3L_7_6635001 chr3L_6635001 RAL-531 1171 chr3L 6642865 6642868 chr3L 6642965 6642966 4 100 0.0 3.0 1.5 1.6 101 chr3L 6642865 intergenic CR45239 + chr3L 6642916 intergenic CR45239 + chr3L 6642966 intergenic CR45239 + chr3L_4_6640001 chr3L_6640001 RAL-531 1172 chr3L 6652058 6652106 chr3L 6652156 6652197 10 96 4.5 4.5 4.5 1.8 139 chr3L 6652058 intergenic not near genes chr3L 6652128 intergenic not near genes chr3L 6652197 intergenic not near genes chr3L_10_6650001 chr3L_6650001 RAL-531 1173 chr3L 6668945 6668993 chr3L 6669046 6669094 10 101 4.5 0.0 2.2 3.1 149 chr3L 6668945 intergenic not near genes chr3L 6669020 intergenic not near genes chr3L 6669094 intergenic not near genes chr3L_10_6665001 chr3L_6665001 RAL-531 1174 chr3L 6781106 6781152 chr3L 6783139 6783182 Doc 5 2032 2.0 0.0 1.0 2.5 2076 chr3L 6781106 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783182 intergenic not near genes chr3L_5_6780001 chr3L_6780001 RAL-531 1175 chr3L 6835912 6835922 chr3L 6836010 6836020 5 98 8.5 3.5 6.0 0.7 108 chr3L 6835912 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836020 intergenic not near genes chr3L_5_6835001 chr3L_6835001 RAL-531 1176 chr3L 6844348 6844388 chr3L 6844514 6844554 11 166 3.0 5.5 4.2 2.1 206 chr3L 6844348 intergenic not near genes chr3L 6844451 intergenic not near genes chr3L 6844554 intergenic not near genes chr3L_11_6840001 chr3L_6840001 RAL-531 1177 chr3L 6887499 6887541 chr3L 6895008 6895053 roo 15 7508 4.0 6.5 5.2 2.4 7554 chr3L 6887499 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895053 intergenic not near genes chr3L_15_6890001 chr3L_6890001 RAL-531 1178 chr3L 6907997 6908047 chr3L 6908102 6908145 8 101 3.0 0.0 1.5 3.2 148 chr3L 6907997 intergenic not near genes chr3L 6908071 intergenic not near genes chr3L 6908145 intergenic not near genes chr3L_8_6905001 chr3L_6905001 RAL-531 1179 chr3L 6974484 6974524 chr3L 6974605 6974635 7 114 0.5 4.0 2.2 2.2 151 chr3L 6974484 intron Galphai - chr3L 6974560 intron Galphai - chr3L 6974635 intron Galphai - chr3L_7_6970001 chr3L_6970001 RAL-531 1180 chr3L 6994871 6994916 chr3L 6995502 6995547 BS 8 631 1.5 4.5 3.0 2.0 676 chr3L 6994871 intergenic bin + chr3L 6995209 intergenic not near genes chr3L 6995547 intergenic not near genes chr3L_8_6995001 chr3L_6995001 RAL-531 1181 chr3L 7007368 7007395 chr3L 7007482 7007510 8 115 0.5 10.5 5.5 1.2 142 chr3L 7007368 intron Mp + chr3L 7007439 intron Mp + chr3L 7007510 intron Mp + chr3L_8_7005001 chr3L_7005001 RAL-531 1182 chr3L 7022841 7022881 chr3L 7023000 7023037 6 157 4.0 5.0 4.5 1.1 196 chr3L 7022841 intron Mp + chr3L 7022939 intron Mp + chr3L 7023037 intron Mp + chr3L_6_7020001 chr3L_7020001 RAL-531 1183 chr3L 7041906 7041916 chr3L 7042003 7042014 5 97 3.5 2.5 3.0 1.2 108 chr3L 7041906 intron Mp + chr3L 7041960 intron Mp + chr3L 7042014 intron Mp + chr3L_5_7040001 chr3L_7040001 RAL-531 1184 chr3L 7130139 7130148 chr3L 7130264 7130273 5 125 5.0 11.5 8.2 0.5 134 chr3L 7130139 intergenic CG15829 + chr3L 7130206 intergenic not near genes chr3L 7130273 intergenic not near genes chr3L_5_7130001 chr3L_7130001 RAL-531 1185 chr3L 7187383 7187415 chr3L 7187485 7187517 12 101 0.0 0.0 0.0 12.0 134 chr3L 7187383 intron Dscam2 - chr3L 7187450 intron Dscam2 - chr3L 7187517 intron Dscam2 - chr3L_12_7185001 chr3L_7185001 RAL-531 1186 chr3L 7258911 7258929 chr3L 7259070 7259089 6 160 1.5 5.0 3.2 1.4 178 chr3L 7258911 intron CG14830 - chr3L 7259000 intron CG14830 - chr3L 7259089 intron CG14830 - chr3L_6_7255001 chr3L_7255001 RAL-531 1187 chr3L 7276188 7276240 chr3L 7276292 7276343 7 102 4.0 5.0 4.5 1.3 155 chr3L 7276188 intron unc-13-4A - chr3L 7276266 intron unc-13-4A - chr3L 7276343 intron unc-13-4A - chr3L_7_7275001 chr3L_7275001 RAL-531 1188 chr3L 7308167 7308218 chr3L 7308263 7308312 5 96 5.5 4.5 5.0 0.8 145 chr3L 7308167 intron unc-13-4A - chr3L 7308240 intron unc-13-4A - chr3L 7308312 intron unc-13-4A - chr3L_5_7305001 chr3L_7305001 RAL-531 1189 chr3L 7318181 7318214 chr3L 7318296 7318324 5 114 4.0 1.5 2.8 1.3 143 chr3L 7318181 intergenic not near genes chr3L 7318252 intergenic not near genes chr3L 7318324 intergenic not near genes chr3L_5_7315001 chr3L_7315001 RAL-531 1190 chr3L 7328999 7329022 chr3L 7329106 7329129 4 107 0.0 5.0 2.5 1.1 130 chr3L 7328999 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329064 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329129 intergenic CG42307 +,mus312 +,CG8602 - chr3L_4_7325001 chr3L_7325001 RAL-531 1191 chr3L 7375905 7375954 chr3L 7376000 7376050 9 92 4.0 5.5 4.8 1.6 145 chr3L 7375905 exon SMSr - chr3L 7375978 intron SMSr - chr3L 7376050 intron SMSr - chr3L_9_7375001 chr3L_7375001 RAL-531 1192 chr3L 7377300 7377341 chr3L 7380425 7380460 297 13 3124 7.5 3.5 5.5 2.0 3160 chr3L 7377300 intron SMSr - chr3L 7378880 intron SMSr - chr3L 7380460 intron SMSr - chr3L_13_7375001 chr3L_7375001 RAL-531 1193 chr3L 7420640 7420687 chr3L 7420840 7420874 17 197 5.0 0.0 2.5 4.9 234 chr3L 7420640 intergenic not near genes chr3L 7420757 intergenic not near genes chr3L 7420874 intergenic not near genes chr3L_17_7420001 chr3L_7420001 RAL-531 1194 chr3L 7450684 7450718 chr3L 7450787 7450818 9 102 4.0 3.5 3.8 1.9 134 chr3L 7450684 intron CG42458 + chr3L 7450751 intron CG42458 + chr3L 7450818 intron CG42458 + chr3L_9_7450001 chr3L_7450001 RAL-531 1195 chr3L 7498746 7498781 chr3L 7503543 7503578 F-element 18 4797 5.5 7.5 6.5 2.4 4832 chr3L 7498746 5` UTR CG8539 - chr3L 7501162 intergenic not near genes chr3L 7503578 intergenic not near genes chr3L_18_7500001 chr3L_7500001 RAL-531 1196 chr3L 7505416 7505440 chr3L 7505512 7505536 4 96 1.5 7.0 4.2 0.8 120 chr3L 7505416 intergenic CG7548 - chr3L 7505476 intergenic CG7548 - chr3L 7505536 intergenic CG7548 - chr3L_4_7505001 chr3L_7505001 RAL-531 1197 chr3L 7574841 7574846 chr3L 7574938 7574943 4 97 0.0 0.0 0.0 4.0 102 chr3L 7574841 intergenic not near genes chr3L 7574892 intergenic not near genes chr3L 7574943 intergenic not near genes chr3L_4_7570001 chr3L_7570001 RAL-531 1198 chr3L 7574847 7574856 chr3L 7574937 7574953 6 94 0.0 0.0 0.0 6.0 106 chr3L 7574847 intergenic not near genes chr3L 7574900 intergenic not near genes chr3L 7574953 intergenic not near genes chr3L_6_7570001 chr3L_7570001 RAL-531 1199 chr3L 7576195 7576228 chr3L 7576303 7576336 4 108 5.5 2.0 3.8 0.8 141 chr3L 7576195 intergenic not near genes chr3L 7576266 intergenic not near genes chr3L 7576336 intergenic not near genes chr3L_4_7575001 chr3L_7575001 RAL-531 1200 chr3L 7721611 7721643 chr3L 7721710 7721736 4 93 5.0 1.0 3.0 1.0 125 chr3L 7721611 intron CG32373 + chr3L 7721674 intron CG32373 + chr3L 7721736 intron CG32373 + chr3L_4_7720001 chr3L_7720001 RAL-531 1201 chr3L 7793696 7793742 chr3L 7800768 7800814 297 15 7071 3.5 5.5 4.5 2.7 7118 chr3L 7793696 intron CG32369 - chr3L 7797255 intron CG32369 - chr3L 7800814 intron CG32369 - chr3L_15_7795001 chr3L_7795001 RAL-531 1202 chr3L 7806129 7806180 chr3L 7806232 7806283 5 102 3.5 0.0 1.8 1.8 154 chr3L 7806129 intron CG32369 - chr3L 7806206 intron CG32369 - chr3L 7806283 intron CG32369 - chr3L_5_7805001 chr3L_7805001 RAL-531 1203 chr3L 7817039 7817084 chr3L 7817192 7817236 17 153 5.5 0.0 2.8 4.5 197 chr3L 7817039 intron Pdp1 - chr3L 7817138 intron Pdp1 - chr3L 7817236 intron Pdp1 - chr3L_17_7815001 chr3L_7815001 RAL-531 1204 chr3L 7845368 7845417 chr3L 7845471 7845519 8 100 5.0 1.0 3.0 2.0 151 chr3L 7845368 intron Pdp1 - chr3L 7845444 intron Pdp1 - chr3L 7845519 intron Pdp1 - chr3L_8_7845001 chr3L_7845001 RAL-531 1205 chr3L 7886503 7886542 chr3L 7889032 7889079 Stalker4 4 2536 0.5 1.5 1.0 2.0 2576 chr3L 7886503 intron CG32365 + chr3L 7887791 intron CG32365 + chr3L 7889079 intron CG32365 + chr3L_4_7885001 chr3L_7885001 RAL-531 1206 chr3L 7916811 7916847 chr3L 7926002 7926038 roo 20 9190 6.0 5.5 5.8 2.9 9227 chr3L 7916811 3` UTR syd - chr3L 7921424 intron syd - chr3L 7926038 3` UTR syd - chr3L_20_7920001 chr3L_7920001 RAL-531 1207 chr3L 7985357 7985392 chr3L 7987696 7987740 NOF 21 2346 6.5 3.5 5.0 3.5 2383 chr3L 7985357 intron nmo + chr3L 7986548 intron nmo + chr3L 7987740 intron nmo + chr3L_21_7985001 chr3L_7985001 RAL-531 1208 chr3L 8064597 8064631 chr3L 8064831 8064856 4 232 3.5 2.0 2.8 1.1 259 chr3L 8064597 intron Ect4 + chr3L 8064726 intron Ect4 + chr3L 8064856 intron Ect4 + chr3L_4_8060001 chr3L_8060001 RAL-531 1209 chr3L 8151066 8151106 chr3L 8151170 8151210 17 98 3.5 3.0 3.2 4.0 144 chr3L 8151066 intron CG13676 - chr3L 8151138 intron CG13676 - chr3L 8151210 5` UTR CG13676 - chr3L_17_8150001 chr3L_8150001 RAL-531 1210 chr3L 8226702 8226732 chr3L 8226821 8226851 5 119 6.0 0.0 3.0 1.2 149 chr3L 8226702 intergenic not near genes chr3L 8226776 intergenic not near genes chr3L 8226851 intergenic not near genes chr3L_5_8225001 chr3L_8225001 RAL-531 1211 chr3L 8395838 8395866 chr3L 8395932 8395956 5 93 1.5 2.0 1.8 1.8 118 chr3L 8395838 intergenic CG7120 + chr3L 8395897 intergenic CG7120 + chr3L 8395956 intergenic CG7120 + chr3L_5_8395001 chr3L_8395001 RAL-531 1212 chr3L 8443559 8443581 chr3L 8443660 8443681 9 100 4.0 5.5 4.8 1.6 122 chr3L 8443559 3` UTR CG6983 - chr3L 8443620 3` UTR CG6983 - chr3L 8443681 3` UTR CG6983 - chr3L_9_8440001 chr3L_8440001 RAL-531 1213 chr3L 8551740 8551769 chr3L 8551822 8551872 8 97 1.5 2.5 2.0 2.7 132 chr3L 8551740 intron rhea + chr3L 8551806 intron rhea + chr3L 8551872 intron rhea + chr3L_8_8550001 chr3L_8550001 RAL-531 1214 chr3L 8606761 8606794 chr3L 8607219 8607251 12 455 5.0 1.5 3.2 2.9 490 chr3L 8606761 intron CG6282 + chr3L 8607006 intron CG6282 + chr3L 8607251 intron CG6282 + chr3L_12_8605001 chr3L_8605001 RAL-531 1215 chr3L 8697272 8697289 chr3L 8697372 8697389 6 98 4.5 5.0 4.8 1.0 117 chr3L 8697272 intergenic not near genes chr3L 8697330 intergenic not near genes chr3L 8697389 intergenic not near genes chr3L_6_8695001 chr3L_8695001 RAL-531 1216 chr3L 8784285 8784293 chr3L 8784376 8784410 4 103 2.0 1.5 1.8 1.4 125 chr3L 8784285 intron Fhos + chr3L 8784348 intron Fhos + chr3L 8784410 intron Fhos + chr3L_4_8780001 chr3L_8780001 RAL-531 1217 chr3L 8791270 8791309 chr3L 8796698 8796748 I-element 7 5436 2.0 0.0 1.0 3.5 5478 chr3L 8791270 exon Fhos + chr3L 8794009 intron Fhos + chr3L 8796748 intron Fhos + chr3L_7_8790001 chr3L_8790001 RAL-531 1218 chr3L 8839719 8839744 chr3L 8839814 8839832 6 97 1.0 1.5 1.2 2.7 113 chr3L 8839719 intron dally + chr3L 8839776 intron dally + chr3L 8839832 intron dally + chr3L_6_8835001 chr3L_8835001 RAL-531 1219 chr3L 8849214 8849231 chr3L 8849296 8849301 4 86 6.0 1.0 3.5 0.9 87 chr3L 8849214 intron dally + chr3L 8849258 intron dally + chr3L 8849301 intron dally + chr3L_4_8845001 chr3L_8845001 RAL-531 1220 chr3L 8861514 8861552 chr3L 8861625 8861663 8 108 1.0 5.5 3.2 1.9 149 chr3L 8861514 intron dally + chr3L 8861588 intron dally + chr3L 8861663 intron dally + chr3L_8_8860001 chr3L_8860001 RAL-531 1221 chr3L 8928251 8928294 chr3L 8928346 8928390 6 95 2.0 1.0 1.5 2.4 139 chr3L 8928251 intron Tsp66E + chr3L 8928320 intron Tsp66E + chr3L 8928390 intron Tsp66E + chr3L_6_8925001 chr3L_8925001 RAL-531 1222 chr3L 9003929 9003977 chr3L 9004029 9004073 14 100 1.0 2.0 1.5 5.6 144 chr3L 9003929 intergenic not near genes chr3L 9004001 intergenic not near genes chr3L 9004073 intergenic not near genes chr3L_14_9000001 chr3L_9000001 RAL-531 1223 chr3L 9024490 9024535 chr3L 9024590 9024618 20 99 5.0 5.5 5.2 3.2 128 chr3L 9024490 intergenic not near genes chr3L 9024554 intergenic not near genes chr3L 9024618 intergenic not near genes chr3L_20_9020001 chr3L_9020001 RAL-531 1224 chr3L 9076917 9076953 chr3L 9084486 9084531 412 9 7573 3.5 3.0 3.2 2.1 7614 chr3L 9076917 exon Tequila + chr3L 9080724 intron Tequila + chr3L 9084531 exon Tequila + chr3L_9_9080001 chr3L_9080001 RAL-531 1225 chr3L 9130538 9130580 chr3L 9134319 9134349 412 5 3772 6.0 1.0 3.5 1.1 3811 chr3L 9130538 intergenic bol - chr3L 9132444 intergenic not near genes chr3L 9134349 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 RAL-531 1226 chr3L 9167262 9167305 chr3L 9167363 9167406 20 100 5.5 3.5 4.5 3.6 144 chr3L 9167262 intron Rdl - chr3L 9167334 intron Rdl - chr3L 9167406 intron Rdl - chr3L_20_9165001 chr3L_9165001 RAL-531 1227 chr3L 9219226 9219279 chr3L 9219918 9219924 jockey 8 673 4.5 4.0 4.2 1.5 698 chr3L 9219226 intergenic not near genes chr3L 9219575 intergenic not near genes chr3L 9219924 intergenic not near genes chr3L_8_9215001 chr3L_9215001 RAL-531 1228 chr3L 9237528 9237542 chr3L 9237634 9237648 4 106 2.5 2.0 2.2 1.2 120 chr3L 9237528 intergenic not near genes chr3L 9237588 intergenic not near genes chr3L 9237648 intergenic not near genes chr3L_4_9235001 chr3L_9235001 RAL-531 1229 chr3L 9270616 9270650 chr3L 9278387 9278406 roo 7 7764 4.0 1.0 2.5 2.0 7790 chr3L 9270616 intron GluRIB + chr3L 9274511 intron GluRIB + chr3L 9278406 exon GluRIB + chr3L_7_9270001 chr3L_9270001 RAL-531 1230 chr3L 9312717 9312728 chr3L 9312804 9312826 6 96 3.0 5.5 4.2 1.2 109 chr3L 9312717 intergenic not near genes chr3L 9312772 intergenic not near genes chr3L 9312826 intergenic not near genes chr3L_6_9310001 chr3L_9310001 RAL-531 1231 chr3L 9314046 9314061 chr3L 9314144 9314159 6 98 0.0 4.0 2.0 2.0 113 chr3L 9314046 intergenic not near genes chr3L 9314102 intergenic not near genes chr3L 9314159 intergenic not near genes chr3L_6_9310001 chr3L_9310001 RAL-531 1232 chr3L 9359573 9359621 chr3L 9359682 9359732 20 110 2.5 3.0 2.8 5.3 159 chr3L 9359573 3` UTR CG32039 + chr3L 9359652 3` UTR CG32039 + chr3L 9359732 3` UTR CG32039 + chr3L_20_9355001 chr3L_9355001 RAL-531 1233 chr3L 9443496 9443525 chr3L 9445307 9445336 S-element 8 1811 7.0 6.0 6.5 1.1 1840 chr3L 9443496 intron CG33926 + chr3L 9444416 intron CG33926 + chr3L 9445336 intron CG33926 + chr3L_8_9440001 chr3L_9440001 RAL-531 1234 chr3L 9501683 9501734 chr3L 9502189 9502240 roo 19 503 4.0 5.0 4.5 3.5 557 chr3L 9501683 intron path - chr3L 9501962 intron path - chr3L 9502240 intron path - chr3L_19_9500001 chr3L_9500001 RAL-531 1235 chr3L 9524026 9524060 chr3L 9524111 9524117 5 84 3.0 3.5 3.2 1.2 91 chr3L 9524026 intron CG33700 - chr3L 9524072 intron CG33700 - chr3L 9524117 intron CG33700 - chr3L_5_9520001 chr3L_9520001 RAL-531 1236 chr3L 9571880 9571932 chr3L 9572248 9572294 jockey 28 365 4.5 4.5 4.5 5.1 414 chr3L 9571880 intron CG42673 + chr3L 9572087 intron CG42673 + chr3L 9572294 intron CG42673 + chr3L_28_9570001 chr3L_9570001 RAL-531 1237 chr3L 9572279 9572326 chr3L 9572378 9572425 9 99 3.0 3.5 3.2 2.1 146 chr3L 9572279 intron CG42673 + chr3L 9572352 intron CG42673 + chr3L 9572425 intron CG42673 + chr3L_9_9570001 chr3L_9570001 RAL-531 1238 chr3L 9575930 9575942 chr3L 9580987 9581015 jockey 4 5067 4.0 2.0 3.0 1.0 5085 chr3L 9575930 intron CG42673 + chr3L 9578472 intron CG42673 + chr3L 9581015 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-531 1239 chr3L 9646793 9646843 chr3L 9646905 9646961 14 117 2.5 0.0 1.2 6.4 168 chr3L 9646793 intron,intron fry -,CG33696 + chr3L 9646877 intron,intron fry -,CG33696 + chr3L 9646961 intron,intron fry -,CG33696 + chr3L_14_9645001 chr3L_9645001 RAL-531 1240 chr3L 9689502 9689532 chr3L 9689591 9689626 11 92 5.0 5.0 5.0 1.8 124 chr3L 9689502 intron CG6767 - chr3L 9689564 intron CG6767 - chr3L 9689626 intron CG6767 - chr3L_11_9685001 chr3L_9685001 RAL-531 1241 chr3L 9697750 9697799 chr3L 9697862 9697911 22 112 3.5 6.5 5.0 3.7 161 chr3L 9697750 intergenic not near genes chr3L 9697830 intergenic not near genes chr3L 9697911 intergenic UbcD4 + chr3L_22_9695001 chr3L_9695001 RAL-531 1242 chr3L 9715584 9715626 chr3L 9715672 9715723 8 94 2.0 2.5 2.2 2.5 139 chr3L 9715584 intron vsg + chr3L 9715654 intron vsg + chr3L 9715723 intron vsg + chr3L_8_9715001 chr3L_9715001 RAL-531 1243 chr3L 9929650 9929700 chr3L 9938449 9938480 roo 10 8796 5.0 4.5 4.8 1.7 8830 chr3L 9929650 intron CG34356 + chr3L 9934065 intron CG34356 + chr3L 9938480 intron CG34356 + chr3L_10_9930001 chr3L_9930001 RAL-531 1244 chr3L 10003136 10003177 chr3L 10003252 10003264 9 111 5.5 4.0 4.8 1.6 128 chr3L 10003136 intron dpr6 + chr3L 10003200 intron dpr6 + chr3L 10003264 intron dpr6 + chr3L_9_10000001 chr3L_10000001 RAL-531 1245 chr3L 10019622 10019647 chr3L 10019901 10019926 10 278 3.0 0.0 1.5 4.0 304 chr3L 10019622 intron dpr6 + chr3L 10019774 intron dpr6 + chr3L 10019926 intron dpr6 + chr3L_10_10015001 chr3L_10015001 RAL-531 1246 chr3L 10049522 10049573 chr3L 10049622 10049673 7 97 1.5 4.0 2.8 1.8 151 chr3L 10049522 intron dpr6 + chr3L 10049598 intron dpr6 + chr3L 10049673 intron dpr6 + chr3L_7_10045001 chr3L_10045001 RAL-531 1247 chr3L 10060098 10060109 chr3L 10067695 10067708 17.6 5 7598 8.5 2.5 5.5 0.8 7610 chr3L 10060098 intron dpr6 + chr3L 10063903 intron dpr6 + chr3L 10067708 intron dpr6 + chr3L_5_10060001 chr3L_10060001 RAL-531 1248 chr3L 10124431 10124484 chr3L 10124527 10124574 9 83 2.0 2.5 2.2 2.8 143 chr3L 10124431 intron dpr6 + chr3L 10124502 intron dpr6 + chr3L 10124574 intron dpr6 + chr3L_9_10120001 chr3L_10120001 RAL-531 1249 chr3L 10148419 10148431 chr3L 10148506 10148515 4 90 3.0 9.5 6.2 0.6 96 chr3L 10148419 3` UTR dpr10 - chr3L 10148467 3` UTR dpr10 - chr3L 10148515 3` UTR dpr10 - chr3L_4_10145001 chr3L_10145001 RAL-531 1250 chr3L 10165642 10165652 chr3L 10165738 10165748 5 96 4.5 0.0 2.2 1.6 106 chr3L 10165642 intron dpr10 - chr3L 10165695 intron dpr10 - chr3L 10165748 intron dpr10 - chr3L_5_10165001 chr3L_10165001 RAL-531 1251 chr3L 10175855 10175895 chr3L 10176098 10176142 8 246 2.5 3.0 2.8 2.1 287 chr3L 10175855 intron dpr10 - chr3L 10175998 intron dpr10 - chr3L 10176142 intron dpr10 - chr3L_8_10175001 chr3L_10175001 RAL-531 1252 chr3L 10214714 10214830 chr3L 10214821 10214928 8 107 0.0 0.0 0.0 8.0 214 chr3L 10214714 intergenic not near genes chr3L 10214821 intergenic not near genes chr3L 10214928 intergenic not near genes chr3L_8_10210001 chr3L_10210001 RAL-531 1253 chr3L 10222753 10222776 chr3L 10222853 10222872 4 99 1.0 8.5 4.8 0.7 119 chr3L 10222753 intron scramb1 - chr3L 10222812 intron scramb1 - chr3L 10222872 intron scramb1 - chr3L_4_10220001 chr3L_10220001 RAL-531 1254 chr3L 10288740 10288742 chr3L 10288843 10288845 4 103 0.0 0.0 0.0 4.0 105 chr3L 10288740 intergenic not near genes chr3L 10288792 intergenic not near genes chr3L 10288845 intergenic not near genes chr3L_4_10285001 chr3L_10285001 RAL-531 1255 chr3L 10298662 10298668 chr3L 10298765 10298775 6 106 0.0 4.5 2.2 1.9 113 chr3L 10298662 intergenic not near genes chr3L 10298718 intergenic not near genes chr3L 10298775 intergenic not near genes chr3L_6_10295001 chr3L_10295001 RAL-531 1256 chr3L 10298675 10298701 chr3L 10298762 10298779 14 101 0.0 3.5 1.8 5.0 104 chr3L 10298675 intergenic not near genes chr3L 10298727 intergenic not near genes chr3L 10298779 intergenic not near genes chr3L_14_10295001 chr3L_10295001 RAL-531 1257 chr3L 10308743 10308766 chr3L 10308820 10308836 4 82 2.0 1.0 1.5 1.6 93 chr3L 10308743 intergenic not near genes chr3L 10308790 intergenic not near genes chr3L 10308836 intergenic not near genes chr3L_4_10305001 chr3L_10305001 RAL-531 1258 chr3L 10328100 10328125 chr3L 10328232 10328257 12 132 9.5 8.5 9.0 1.2 157 chr3L 10328100 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328257 intergenic not near genes chr3L_12_10325001 chr3L_10325001 RAL-531 1259 chr3L 10352481 10352502 chr3L 10352701 10352734 6 239 3.0 4.0 3.5 1.3 253 chr3L 10352481 intron CR44327 + chr3L 10352608 intron CR44327 + chr3L 10352734 intron CR44327 + chr3L_6_10350001 chr3L_10350001 RAL-531 1260 chr3L 10367496 10367519 chr3L 10367593 10367616 15 97 2.5 0.5 1.5 6.0 120 chr3L 10367496 intergenic CR44327 + chr3L 10367556 intergenic CR44327 + chr3L 10367616 intergenic CR44327 + chr3L_15_10365001 chr3L_10365001 RAL-531 1261 chr3L 10381308 10381354 chr3L 10381397 10381452 7 95 0.5 0.0 0.2 5.8 144 chr3L 10381308 intergenic not near genes chr3L 10381380 intergenic not near genes chr3L 10381452 intergenic not near genes chr3L_7_10380001 chr3L_10380001 RAL-531 1262 chr3L 10421336 10421366 chr3L 10421512 10421542 11 174 7.5 3.5 5.5 1.7 206 chr3L 10421336 intergenic not near genes chr3L 10421439 intergenic not near genes chr3L 10421542 intergenic not near genes chr3L_11_10420001 chr3L_10420001 RAL-531 1263 chr3L 10584265 10584302 chr3L 10584368 10584389 15 105 6.5 3.0 4.8 2.6 124 chr3L 10584265 intron A2bp1 + chr3L 10584327 intron A2bp1 + chr3L 10584389 intron A2bp1 + chr3L_15_10580001 chr3L_10580001 RAL-531 1264 chr3L 10600437 10600472 chr3L 10600539 10600574 5 101 2.0 1.5 1.8 1.8 137 chr3L 10600437 intergenic not near genes chr3L 10600506 intergenic not near genes chr3L 10600574 intergenic not near genes chr3L_5_10600001 chr3L_10600001 RAL-531 1265 chr3L 10614751 10614796 chr3L 10614858 10614895 8 102 0.0 5.5 2.8 2.1 144 chr3L 10614751 intergenic not near genes chr3L 10614823 intergenic not near genes chr3L 10614895 intergenic not near genes chr3L_8_10610001 chr3L_10610001 RAL-531 1266 chr3L 10621831 10621876 chr3L 10621938 10621975 11 104 6.0 3.5 4.8 1.9 144 chr3L 10621831 intergenic not near genes chr3L 10621903 intergenic not near genes chr3L 10621975 intergenic not near genes chr3L_11_10620001 chr3L_10620001 RAL-531 1267 chr3L 10658060 10658203 chr3L 10658157 10658350 20 129 0.0 0.0 0.0 20.0 290 chr3L 10658060 intron CG32066 - chr3L 10658205 intron CG32066 - chr3L 10658350 intron CG32066 - chr3L_20_10655001 chr3L_10655001 RAL-531 1268 chr3L 10664461 10664484 chr3L 10664576 10664599 9 115 0.0 1.5 0.8 5.0 138 chr3L 10664461 intergenic CG32068 +,simj + chr3L 10664530 intergenic CG32068 +,simj + chr3L 10664599 intergenic simj +,CG32068 + chr3L_9_10660001 chr3L_10660001 RAL-531 1269 chr3L 10694903 10694934 chr3L 10695015 10695046 12 111 0.0 5.5 2.8 3.2 143 chr3L 10694903 intron NijA - chr3L 10694974 intron NijA - chr3L 10695046 exon NijA - chr3L_12_10690001 chr3L_10690001 RAL-531 1270 chr3L 10706395 10706589 chr3L 10706701 10706741 4 268 0.0 0.0 0.0 4.0 346 chr3L 10706395 intergenic not near genes chr3L 10706568 intergenic not near genes chr3L 10706741 intergenic not near genes chr3L_4_10705001 chr3L_10705001 RAL-531 1271 chr3L 10795042 10795071 chr3L 10795142 10795171 9 100 4.0 0.0 2.0 3.0 129 chr3L 10795042 5` UTR CR44546 + chr3L 10795106 5` UTR CR44546 + chr3L 10795171 5` UTR CR44546 + chr3L_9_10795001 chr3L_10795001 RAL-531 1272 chr3L 10887367 10887380 chr3L 10887466 10887479 5 99 0.5 7.5 4.0 1.0 112 chr3L 10887367 intergenic not near genes chr3L 10887423 intergenic not near genes chr3L 10887479 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-531 1273 chr3L 10997576 10997621 chr3L 10997693 10997700 5 98 0.0 5.0 2.5 1.4 124 chr3L 10997576 intron klu - chr3L 10997638 intron klu - chr3L 10997700 intron klu - chr3L_5_10995001 chr3L_10995001 RAL-531 1274 chr3L 11042104 11042119 chr3L 11042263 11042278 5 159 8.5 0.0 4.2 1.0 174 chr3L 11042104 intron CG43693 - chr3L 11042191 intron CG43693 - chr3L 11042278 intron CG43693 - chr3L_5_11040001 chr3L_11040001 RAL-531 1275 chr3L 11042135 11042154 chr3L 11042259 11042312 6 153 5.0 0.0 2.5 1.7 177 chr3L 11042135 intron CG43693 - chr3L 11042224 intron CG43693 - chr3L 11042312 intron CG43693 - chr3L_6_11040001 chr3L_11040001 RAL-531 1276 chr3L 11053646 11053683 chr3L 11053749 11053782 4 96 0.0 3.5 1.8 1.4 136 chr3L 11053646 intergenic CG7888 + chr3L 11053714 intergenic CG7888 + chr3L 11053782 intergenic CG7888 + chr3L_4_11050001 chr3L_11050001 RAL-531 1277 chr3L 11087046 11087081 chr3L 11088846 11088872 S-element 6 1804 2.0 1.5 1.8 2.1 1826 chr3L 11087046 intron JIL-1 - chr3L 11087959 intron JIL-1 - chr3L 11088872 intron JIL-1 - chr3L_6_11085001 chr3L_11085001 RAL-531 1278 chr3L 11135508 11135802 chr3L 11135758 11135905 17 170 1.0 0.0 0.5 11.3 397 chr3L 11135508 intergenic CG14143 + chr3L 11135706 intergenic CG14143 +,CG32082 + chr3L 11135905 intergenic CG32082 +,CG14143 + chr3L_17_11135001 chr3L_11135001 RAL-531 1279 chr3L 11237659 11237664 chr3L 11237759 11237764 5 100 3.5 0.0 1.8 1.8 105 chr3L 11237659 intergenic CR44718 -,CR44719 + chr3L 11237712 intergenic CR44718 -,CR44719 + chr3L 11237764 intergenic CR44718 -,CR44719 + chr3L_5_11235001 chr3L_11235001 RAL-531 1280 chr3L 11241757 11241792 chr3L 11241859 11241894 12 101 2.0 3.5 2.8 3.2 137 chr3L 11241757 intergenic not near genes chr3L 11241826 intergenic not near genes chr3L 11241894 intergenic not near genes chr3L_12_11240001 chr3L_11240001 RAL-531 1281 chr3L 11264447 11264495 chr3L 11271415 11271451 17.6 16 6970 4.5 4.5 4.5 2.9 7004 chr3L 11264447 intergenic not near genes chr3L 11267949 intergenic not near genes chr3L 11271451 intergenic not near genes chr3L_16_11265001 chr3L_11265001 RAL-531 1282 chr3L 11272635 11272656 chr3L 11273074 11273100 12 441 5.0 3.0 4.0 2.4 465 chr3L 11272635 intergenic not near genes chr3L 11272868 intergenic not near genes chr3L 11273100 intergenic not near genes chr3L_12_11270001 chr3L_11270001 RAL-531 1283 chr3L 11304818 11304836 chr3L 11304935 11304953 8 117 5.0 0.0 2.5 2.3 135 chr3L 11304818 intergenic not near genes chr3L 11304886 intergenic not near genes chr3L 11304953 intergenic not near genes chr3L_8_11300001 chr3L_11300001 RAL-531 1284 chr3L 11379337 11379382 chr3L 11379430 11379462 6 82 3.0 1.5 2.2 1.9 125 chr3L 11379337 intergenic not near genes chr3L 11379400 intergenic not near genes chr3L 11379462 intergenic not near genes chr3L_6_11375001 chr3L_11375001 RAL-531 1285 chr3L 11435541 11435582 chr3L 11435730 11435766 11 188 3.0 2.0 2.5 3.1 225 chr3L 11435541 intergenic CG6149 -,CR44548 + chr3L 11435654 5` UTR CR44548 + chr3L 11435766 5` UTR CR44548 + chr3L_11_11435001 chr3L_11435001 RAL-531 1286 chr3L 11444253 11444261 chr3L 11444357 11444365 5 104 3.0 0.0 1.5 2.0 112 chr3L 11444253 intergenic CR44549 - chr3L 11444309 intergenic CR44549 - chr3L 11444365 intergenic CR44549 - chr3L_5_11440001 chr3L_11440001 RAL-531 1287 chr3L 11528229 11528259 chr3L 11528332 11528364 11 104 0.0 8.0 4.0 2.2 135 chr3L 11528229 intron Mob2 - chr3L 11528296 intron Mob2 - chr3L 11528364 intron Mob2 - chr3L_11_11525001 chr3L_11525001 RAL-531 1288 chr3L 11560771 11560812 chr3L 11560869 11560910 11 97 7.0 1.5 4.2 2.1 139 chr3L 11560771 intron Mob2 - chr3L 11560840 intron Mob2 - chr3L 11560910 intron Mob2 - chr3L_11_11560001 chr3L_11560001 RAL-531 1289 chr3L 11579556 11579584 chr3L 11579662 11579709 12 121 6.0 1.5 3.8 2.5 153 chr3L 11579556 intergenic CG43390 - chr3L 11579632 intergenic CG43390 - chr3L 11579709 intergenic CG43390 - chr3L_12_11575001 chr3L_11575001 RAL-531 1290 chr3L 11673955 11673977 chr3L 11674050 11674073 11 96 3.0 0.0 1.5 4.4 118 chr3L 11673955 intron CG32085 - chr3L 11674014 intron CG32085 - chr3L 11674073 intron CG32085 - chr3L_11_11670001 chr3L_11670001 RAL-531 1291 chr3L 11678078 11678119 chr3L 11678185 11678226 8 107 1.5 3.5 2.5 2.3 148 chr3L 11678078 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678226 intron CG32085 - chr3L_8_11675001 chr3L_11675001 RAL-531 1292 chr3L 11723072 11723115 chr3L 11727887 11727930 Doc 13 4815 5.0 4.0 4.5 2.4 4858 chr3L 11723072 3` UTR Bmcp + chr3L 11725501 intron Bmcp + chr3L 11727930 3` UTR Bmcp + chr3L_13_11725001 chr3L_11725001 RAL-531 1293 chr3L 11743995 11744023 chr3L 11744123 11744145 9 123 3.0 1.0 2.0 3.0 150 chr3L 11743995 exon CG6024 - chr3L 11744070 intron CG6024 - chr3L 11744145 intron CG6024 - chr3L_9_11740001 chr3L_11740001 RAL-531 1294 chr3L 7749470 7749471 chr3L 11777678 11777678 5 4028207 13.5 19.5 16.5 0.3 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_9760001 chr3L_9760001 RAL-531 1295 chr3L 11811435 11811479 chr3L 11811533 11811573 17 97 6.0 4.5 5.2 2.7 138 chr3L 11811435 intron CG42255 - chr3L 11811504 intron CG42255 - chr3L 11811573 exon CG42255 - chr3L_17_11810001 chr3L_11810001 RAL-531 1296 chr3L 11849312 11849356 chr3L 11849432 11849476 9 118 1.5 3.5 2.5 2.6 164 chr3L 11849312 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849476 intergenic not near genes chr3L_9_11845001 chr3L_11845001 RAL-531 1297 chr3L 11854845 11854889 chr3L 11854963 11855010 14 120 1.5 2.0 1.8 5.0 165 chr3L 11854845 exon CG44837 - chr3L 11854928 intron CG44837 - chr3L 11855010 intron CG44837 - chr3L_14_11850001 chr3L_11850001 RAL-531 1298 chr3L 11864541 11864581 chr3L 11865856 11865881 pogo 15 1308 2.5 2.5 2.5 4.3 1340 chr3L 11864541 intron CG44837 - chr3L 11865211 intron CG44837 - chr3L 11865881 intron CG44837 - chr3L_15_11865001 chr3L_11865001 RAL-531 1299 chr3L 11870204 11870251 chr3L 11870356 11870394 10 151 4.5 0.0 2.2 3.1 190 chr3L 11870204 intron CG44837 - chr3L 11870299 intron CG44837 - chr3L 11870394 intron CG44837 - chr3L_10_11870001 chr3L_11870001 RAL-531 1300 chr3L 11887238 11887286 chr3L 11887355 11887410 7 115 4.5 0.0 2.2 2.2 172 chr3L 11887238 intron CG44837 - chr3L 11887324 intron,3` UTR CG44837 -,CG5897 - chr3L 11887410 intron,3` UTR CG44837 -,CG5897 - chr3L_7_11885001 chr3L_11885001 RAL-531 1301 chr3L 11943474 11943516 chr3L 11943595 11943637 14 119 4.5 6.5 5.5 2.2 163 chr3L 11943474 3` UTR Rpt4R + chr3L 11943556 intergenic Rpt4R +,CG5883 - chr3L 11943637 intergenic CG5883 -,Rpt4R + chr3L_14_11940001 chr3L_11940001 RAL-531 1302 chr3L 11984561 11984601 chr3L 11984656 11984675 5 88 3.0 0.5 1.8 1.8 114 chr3L 11984561 intergenic CG6938 + chr3L 11984618 intergenic CG6938 + chr3L 11984675 intergenic CG6938 + chr3L_5_11980001 chr3L_11980001 RAL-531 1303 chr3L 12019318 12019348 chr3L 12019451 12019481 6 133 2.5 4.0 3.2 1.4 163 chr3L 12019318 intron rols - chr3L 12019400 intron rols - chr3L 12019481 intron rols - chr3L_6_12015001 chr3L_12015001 RAL-531 1304 chr3L 12075409 12075460 chr3L 12075518 12075564 6 104 2.5 0.0 1.2 2.7 155 chr3L 12075409 intron Sema-5c - chr3L 12075486 intron Sema-5c - chr3L 12075564 intron Sema-5c - chr3L_6_12075001 chr3L_12075001 RAL-531 1305 chr3L 12092380 12092402 chr3L 12092476 12092499 8 97 2.5 2.0 2.2 2.5 119 chr3L 12092380 intergenic not near genes chr3L 12092440 intergenic not near genes chr3L 12092499 intergenic not near genes chr3L_8_12090001 chr3L_12090001 RAL-531 1306 chr3L 12119739 12119790 chr3L 12119856 12119907 20 115 4.0 3.5 3.8 4.2 168 chr3L 12119739 3` UTR ssp + chr3L 12119823 intergenic ssp +,CG11560 + chr3L 12119907 intergenic CG11560 +,ssp + chr3L_20_12115001 chr3L_12115001 RAL-531 1307 chr3L 12170771 12170816 chr3L 12170873 12170918 9 101 2.0 4.5 3.2 2.1 147 chr3L 12170771 intron Rh7 - chr3L 12170844 intron Rh7 - chr3L 12170918 intron Rh7 - chr3L_9_12170001 chr3L_12170001 RAL-531 1308 chr3L 12340613 12340632 chr3L 12340723 12340742 8 110 2.0 6.5 4.2 1.5 129 chr3L 12340613 intron CrzR - chr3L 12340678 intron CrzR - chr3L 12340742 intron CrzR - chr3L_8_12340001 chr3L_12340001 RAL-531 1309 chr3L 12343748 12343770 chr3L 12344963 12345001 6 1225 4.5 4.5 4.5 1.1 1253 chr3L 12343748 intron CrzR - chr3L 12344374 intron CrzR - chr3L 12345001 intron CrzR - chr3L_6_12340001 chr3L_12340001 RAL-531 1310 chr3L 12541512 12541520 chr3L 12541616 12541624 6 104 0.0 0.0 0.0 6.0 112 chr3L 12541512 intron sowah - chr3L 12541568 intron sowah - chr3L 12541624 intron sowah - chr3L_6_12540001 chr3L_12540001 RAL-531 1311 chr3L 12563983 12564017 chr3L 12564219 12564253 14 236 1.0 2.0 1.5 5.6 270 chr3L 12563983 intron sowah - chr3L 12564118 intron sowah - chr3L 12564253 intron sowah - chr3L_14_12560001 chr3L_12560001 RAL-531 1312 chr3L 12578040 12578071 chr3L 12578148 12578179 6 108 3.0 0.0 1.5 2.4 139 chr3L 12578040 intergenic not near genes chr3L 12578110 intergenic not near genes chr3L 12578179 intergenic not near genes chr3L_6_12575001 chr3L_12575001 RAL-531 1313 chr3L 12587335 12587382 chr3L 12587438 12587485 12 103 2.5 0.0 1.2 5.5 150 chr3L 12587335 intron ara + chr3L 12587410 intron ara + chr3L 12587485 intron ara + chr3L_12_12585001 chr3L_12585001 RAL-531 1314 chr3L 12626132 12626163 chr3L 12626261 12626292 8 128 2.5 0.0 1.2 3.6 160 chr3L 12626132 intergenic not near genes chr3L 12626212 intergenic not near genes chr3L 12626292 intergenic not near genes chr3L_8_12625001 chr3L_12625001 RAL-531 1315 chr3L 12728017 12728040 chr3L 12728121 12728144 15 104 2.5 6.0 4.2 2.9 127 chr3L 12728017 intergenic not near genes chr3L 12728080 intergenic not near genes chr3L 12728144 intergenic not near genes chr3L_15_12725001 chr3L_12725001 RAL-531 1316 chr3L 12743255 12743262 chr3L 12743352 12743359 5 97 0.0 0.0 0.0 5.0 104 chr3L 12743255 intron CG32112 + chr3L 12743307 intron CG32112 + chr3L 12743359 intron CG32112 + chr3L_5_12740001 chr3L_12740001 RAL-531 1317 chr3L 12801971 12802118 chr3L 12802058 12802357 13 134 0.5 0.5 0.5 8.7 386 chr3L 12801971 intron Atg1 - chr3L 12802164 intron Atg1 - chr3L 12802357 intron Atg1 - chr3L_13_12800001 chr3L_12800001 RAL-531 1318 chr3L 12802120 12802122 chr3L 12802358 12802361 7 239 0.5 8.0 4.2 1.3 241 chr3L 12802120 intron Atg1 - chr3L 12802240 intron Atg1 - chr3L 12802361 intron Atg1 - chr3L_7_12800001 chr3L_12800001 RAL-531 1319 chr3L 12858745 12858792 chr3L 12859258 12859306 14 506 4.0 1.0 2.5 4.0 561 chr3L 12858745 exon CG32107 - chr3L 12859026 exon CG32107 - chr3L 12859306 exon CG32107 - chr3L_14_12855001 chr3L_12855001 RAL-531 1320 chr3L 12874903 12874959 chr3L 12877215 12877271 jockey 11 2309 2.5 3.5 3.0 2.8 2368 chr3L 12874903 intergenic not near genes chr3L 12876087 intergenic not near genes chr3L 12877271 intergenic not near genes chr3L_11_12875001 chr3L_12875001 RAL-531 1321 chr3L 12894790 12894814 chr3L 12894888 12894895 6 95 11.0 3.0 7.0 0.8 105 chr3L 12894790 intergenic CG14118 + chr3L 12894842 intergenic CG14118 + chr3L 12894895 intergenic CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-531 1322 chr3L 12957779 12957815 chr3L 12962281 12962317 copia 5 4501 4.0 7.5 5.8 0.7 4538 chr3L 12957779 intergenic not near genes chr3L 12960048 intergenic not near genes chr3L 12962317 intergenic not near genes chr3L_5_12960001 chr3L_12960001 RAL-531 1323 chr3L 12966980 12967001 chr3L 12967618 12967626 4 636 2.5 3.0 2.8 1.1 646 chr3L 12966980 exon Or69a - chr3L 12967303 exon Or69a - chr3L 12967626 exon Or69a - chr3L_4_12965001 chr3L_12965001 RAL-531 1324 chr3L 13017898 13017918 chr3L 13018000 13018020 12 101 2.0 7.5 4.8 2.1 122 chr3L 13017898 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017959 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018020 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_12_13015001 chr3L_13015001 RAL-531 1325 chr3L 13149523 13149568 chr3L 13149635 13149680 8 111 1.5 0.0 0.8 4.4 157 chr3L 13149523 intergenic not near genes chr3L 13149602 intergenic not near genes chr3L 13149680 intergenic not near genes chr3L_8_13145001 chr3L_13145001 RAL-531 1326 chr3L 13161751 13161791 chr3L 13161847 13161887 6 94 3.0 4.5 3.8 1.2 136 chr3L 13161751 intergenic not near genes chr3L 13161819 intergenic not near genes chr3L 13161887 intergenic not near genes chr3L_6_13160001 chr3L_13160001 RAL-531 1327 chr3L 13197083 13197116 chr3L 13197227 13197249 5 138 0.0 3.0 1.5 2.0 166 chr3L 13197083 intergenic not near genes chr3L 13197166 intergenic not near genes chr3L 13197249 intergenic not near genes chr3L_5_13195001 chr3L_13195001 RAL-531 1328 chr3L 13218882 13218914 chr3L 13218986 13219018 6 98 8.0 3.5 5.8 0.9 136 chr3L 13218882 intergenic CR45098 - chr3L 13218950 intergenic CR45098 - chr3L 13219018 intergenic CR45098 - chr3L_6_13215001 chr3L_13215001 RAL-531 1329 chr3L 13218918 13218934 chr3L 13218983 13218992 4 64 4.0 2.0 3.0 1.0 74 chr3L 13218918 intergenic CR45098 - chr3L 13218955 intergenic CR45098 - chr3L 13218992 intergenic CR45098 - chr3L_4_13215001 chr3L_13215001 RAL-531 1330 chr3L 13267277 13267313 chr3L 13267410 13267419 8 126 1.0 5.0 3.0 2.0 142 chr3L 13267277 intron caps + chr3L 13267348 intron caps + chr3L 13267419 intron caps + chr3L_8_13265001 chr3L_13265001 RAL-531 1331 chr3L 13296506 13296539 chr3L 13296617 13296650 13 110 2.5 8.5 5.5 2.0 144 chr3L 13296506 intergenic Sfp70A4 -,CR45253 + chr3L 13296578 3` UTR Sfp70A4 - chr3L 13296650 3` UTR Sfp70A4 - chr3L_13_13295001 chr3L_13295001 RAL-531 1332 chr3L 13315821 13315862 chr3L 13315926 13315969 10 106 2.5 4.5 3.5 2.2 148 chr3L 13315821 intergenic not near genes chr3L 13315895 intergenic not near genes chr3L 13315969 intergenic not near genes chr3L_10_13315001 chr3L_13315001 RAL-531 1333 chr3L 13337151 13337158 chr3L 13337262 13337269 6 111 0.0 5.5 2.8 1.6 118 chr3L 13337151 intergenic not near genes chr3L 13337210 intergenic not near genes chr3L 13337269 intergenic not near genes chr3L_6_13335001 chr3L_13335001 RAL-531 1334 chr3L 13377372 13377424 chr3L 13377468 13377520 13 96 6.0 3.5 4.8 2.2 148 chr3L 13377372 intergenic not near genes chr3L 13377446 intergenic not near genes chr3L 13377520 intergenic CG14111 + chr3L_13_13375001 chr3L_13375001 RAL-531 1335 chr3L 13525165 13525185 chr3L 13532950 13532975 roo 6 7793 7.0 4.0 5.5 0.9 7810 chr3L 13525165 intergenic not near genes chr3L 13529070 intergenic not near genes chr3L 13532975 intergenic not near genes chr3L_6_13525001 chr3L_13525001 RAL-531 1336 chr3L 13596016 13596065 chr3L 13596151 13596195 16 133 4.0 1.0 2.5 4.6 179 chr3L 13596016 intron bru-3 - chr3L 13596106 intron bru-3 - chr3L 13596195 intron bru-3 - chr3L_16_13595001 chr3L_13595001 RAL-531 1337 chr3L 13657054 13657064 chr3L 13657154 13657159 5 99 4.5 4.5 4.5 0.9 105 chr3L 13657054 intron bru-3 - chr3L 13657106 intron bru-3 - chr3L 13657159 intron bru-3 - chr3L_5_13655001 chr3L_13655001 RAL-531 1338 chr3L 13804526 13804560 chr3L 13822831 13822861 roo 6 18303 8.0 5.5 6.8 0.8 18335 chr3L 13804526 intergenic not near genes chr3L 13813694 intergenic not near genes chr3L 13822861 intergenic not near genes chr3L_6_13810001 chr3L_13810001 RAL-531 1339 chr3L 13866772 13866816 chr3L 13868420 13868464 14 1649 19.0 44.0 31.5 0.4 1692 chr3L 13866772 5` UTR CG8745 - chr3L 13867618 3` UTR dysc - chr3L 13868464 3` UTR dysc - chr3L_14_13865001 chr3L_13865001 RAL-531 1340 chr3L 13884361 13884380 chr3L 13884470 13884480 7 109 9.5 4.5 7.0 0.9 119 chr3L 13884361 intron dysc - chr3L 13884420 intron dysc - chr3L 13884480 intron dysc - chr3L_7_13880001 chr3L_13880001 RAL-531 1341 chr3L 13901575 13901600 chr3L 13901654 13901697 5 93 3.0 1.0 2.0 1.7 122 chr3L 13901575 intron dysc - chr3L 13901636 intron dysc - chr3L 13901697 5` UTR dysc - chr3L_5_13900001 chr3L_13900001 RAL-531 1342 chr3L 13920402 13920433 chr3L 13920502 13920533 9 100 4.0 6.0 5.0 1.5 131 chr3L 13920402 intron Rgl - chr3L 13920468 intron Rgl - chr3L 13920533 intron Rgl - chr3L_9_13920001 chr3L_13920001 RAL-531 1343 chr3L 14055359 14055406 chr3L 14055697 14055745 14 338 4.5 1.5 3.0 3.5 386 chr3L 14055359 intron CG32138 + chr3L 14055552 intron CG32138 + chr3L 14055745 intron CG32138 + chr3L_14_14055001 chr3L_14055001 RAL-531 1344 chr3L 14076057 14076103 chr3L 14076156 14076202 15 99 0.0 4.0 2.0 5.0 145 chr3L 14076057 3` UTR,intron Pex1 +,btl + chr3L 14076130 intron btl + chr3L 14076202 intron btl + chr3L_15_14075001 chr3L_14075001 RAL-531 1345 chr3L 14141394 14141413 chr3L 14141501 14141520 7 107 2.0 0.0 1.0 3.5 126 chr3L 14141394 intergenic not near genes chr3L 14141457 intergenic not near genes chr3L 14141520 intergenic not near genes chr3L_7_14140001 chr3L_14140001 RAL-531 1346 chr3L 14185150 14185187 chr3L 14185236 14185268 13 90 2.0 2.5 2.2 4.1 118 chr3L 14185150 intergenic not near genes chr3L 14185209 intergenic not near genes chr3L 14185268 intergenic not near genes chr3L_13_14185001 chr3L_14185001 RAL-531 1347 chr3L 14194709 14194742 chr3L 14194801 14194838 13 95 5.5 3.5 4.5 2.4 129 chr3L 14194709 intron nuf + chr3L 14194774 intron nuf + chr3L 14194838 intron nuf + chr3L_13_14190001 chr3L_14190001 RAL-531 1348 chr3L 14207843 14207881 chr3L 14207943 14207961 5 95 1.5 2.0 1.8 1.8 118 chr3L 14207843 intron nuf + chr3L 14207902 intron nuf + chr3L 14207961 intron nuf + chr3L_5_14205001 chr3L_14205001 RAL-531 1349 chr3L 14211432 14211465 chr3L 14211516 14211548 17 95 1.0 5.0 3.0 4.2 116 chr3L 14211432 intron nuf + chr3L 14211490 intron nuf + chr3L 14211548 intron nuf + chr3L_17_14210001 chr3L_14210001 RAL-531 1350 chr3L 14245556 14245593 chr3L 14245665 14245689 1360 10 106 0.0 3.5 1.8 3.6 133 chr3L 14245556 3` UTR CR44561 - chr3L 14245622 3` UTR CR44561 - chr3L 14245689 3` UTR CR44561 - chr3L_10_14245001 chr3L_14245001 RAL-531 1351 chr3L 14295989 14295998 chr3L 14296478 14296501 roo 4 491 2.0 5.5 3.8 0.8 512 chr3L 14295989 intron fz + chr3L 14296245 intron fz + chr3L 14296501 intron fz + chr3L_4_14295001 chr3L_14295001 RAL-531 1352 chr3L 14338277 14338325 chr3L 14338393 14338440 23 114 0.0 3.0 1.5 9.2 163 chr3L 14338277 intron fz + chr3L 14338358 intron fz + chr3L 14338440 intron fz + chr3L_23_14335001 chr3L_14335001 RAL-531 1353 chr3L 14348909 14348933 chr3L 14348998 14349039 5 101 0.0 2.5 1.2 2.3 130 chr3L 14348909 intron fz + chr3L 14348974 intron fz + chr3L 14349039 intron fz + chr3L_5_14345001 chr3L_14345001 RAL-531 1354 chr3L 14356502 14356545 chr3L 14356600 14356641 6 98 3.0 1.0 2.0 2.0 139 chr3L 14356502 intron fz + chr3L 14356572 intron fz + chr3L 14356641 intron fz + chr3L_6_14355001 chr3L_14355001 RAL-531 1355 chr3L 14396637 14396678 chr3L 14396779 14396820 7 141 3.5 0.0 1.8 2.5 183 chr3L 14396637 intergenic not near genes chr3L 14396728 intergenic not near genes chr3L 14396820 intergenic not near genes chr3L_7_14395001 chr3L_14395001 RAL-531 1356 chr3L 14440749 14440770 chr3L 14440854 14440875 8 105 5.5 3.5 4.5 1.5 126 chr3L 14440749 intron bbg - chr3L 14440812 intron bbg - chr3L 14440875 intron bbg - chr3L_8_14440001 chr3L_14440001 RAL-531 1357 chr3L 14453694 14453725 chr3L 14453793 14453832 5 100 0.0 8.5 4.2 1.0 138 chr3L 14453694 intron bbg - chr3L 14453763 intron bbg - chr3L 14453832 intron bbg - chr3L_5_14450001 chr3L_14450001 RAL-531 1358 chr3L 14458915 14458960 chr3L 14459012 14459057 13 97 1.5 6.5 4.0 2.6 142 chr3L 14458915 intron bbg - chr3L 14458986 intron bbg - chr3L 14459057 intron bbg - chr3L_13_14455001 chr3L_14455001 RAL-531 1359 chr3L 14468427 14468475 chr3L 14473653 14473701 copia 17 5225 3.5 4.0 3.8 3.5 5274 chr3L 14468427 intron bbg - chr3L 14471064 intron bbg - chr3L 14473701 intron bbg - chr3L_17_14470001 chr3L_14470001 RAL-531 1360 chr3L 14486134 14486172 chr3L 14486231 14486269 10 96 0.5 4.5 2.5 2.9 135 chr3L 14486134 intron bbg - chr3L 14486202 intron bbg - chr3L 14486269 intron bbg - chr3L_10_14485001 chr3L_14485001 RAL-531 1361 chr3L 14502421 14502465 chr3L 14502597 14502630 15 172 5.5 2.0 3.8 3.1 209 chr3L 14502421 intron bbg - chr3L 14502526 intron bbg - chr3L 14502630 intron bbg - chr3L_15_14500001 chr3L_14500001 RAL-531 1362 chr3L 14522083 14522130 chr3L 14522198 14522249 13 118 4.0 3.0 3.5 2.9 166 chr3L 14522083 intron bbg - chr3L 14522166 intron bbg - chr3L 14522249 intron bbg - chr3L_13_14520001 chr3L_14520001 RAL-531 1363 chr3L 14531203 14531245 chr3L 14531336 14531378 10 133 2.0 4.5 3.2 2.4 175 chr3L 14531203 intron bbg - chr3L 14531290 intron bbg - chr3L 14531378 intron bbg - chr3L_10_14530001 chr3L_14530001 RAL-531 1364 chr3L 14635686 14635734 chr3L 14635784 14635833 7 95 2.0 2.5 2.2 2.2 147 chr3L 14635686 intron dlp + chr3L 14635760 intron dlp + chr3L 14635833 intron dlp + chr3L_7_14635001 chr3L_14635001 RAL-531 1365 chr3L 14684607 14684640 chr3L 14684719 14684743 9 111 2.5 3.0 2.8 2.4 136 chr3L 14684607 intron ome + chr3L 14684675 intron ome + chr3L 14684743 intron ome + chr3L_9_14680001 chr3L_14680001 RAL-531 1366 chr3L 14725583 14725624 chr3L 14728597 14728638 Doc 10 3013 0.0 7.5 3.8 2.1 3055 chr3L 14725583 intron ome + chr3L 14727110 intron ome + chr3L 14728638 intron ome + chr3L_10_14725001 chr3L_14725001 RAL-531 1367 chr3L 14740871 14740920 chr3L 14740980 14741029 17 106 8.5 3.0 5.8 2.5 158 chr3L 14740871 intron ome + chr3L 14740950 intron ome + chr3L 14741029 intron ome + chr3L_17_14740001 chr3L_14740001 RAL-531 1368 chr3L 14791346 14791394 chr3L 14791490 14791540 16 144 5.5 5.0 5.2 2.6 194 chr3L 14791346 intron CG9425 + chr3L 14791443 intron CG9425 + chr3L 14791540 intron CG9425 + chr3L_16_14790001 chr3L_14790001 RAL-531 1369 chr3L 14825141 14825155 chr3L 14832888 14832902 Stalker2 8 7747 3.0 7.5 5.2 1.3 7761 chr3L 14825141 intron CG17839 + chr3L 14829022 intron CG17839 + chr3L 14832902 intron CG17839 + chr3L_8_14825001 chr3L_14825001 RAL-531 1370 chr3L 14861785 14861829 chr3L 14861885 14861929 14 96 3.0 1.0 2.0 4.7 144 chr3L 14861785 intron CG17839 + chr3L 14861857 intron CG17839 + chr3L 14861929 intron CG17839 + chr3L_14_14860001 chr3L_14860001 RAL-531 1371 chr3L 14892433 14892482 chr3L 14892529 14892579 17 95 4.5 4.0 4.2 3.3 146 chr3L 14892433 intergenic not near genes chr3L 14892506 intergenic not near genes chr3L 14892579 intergenic not near genes chr3L_17_14890001 chr3L_14890001 RAL-531 1372 chr3L 14912167 14912210 chr3L 14912269 14912312 11 102 2.5 2.5 2.5 3.1 145 chr3L 14912167 intron DCX-EMAP + chr3L 14912240 intron DCX-EMAP + chr3L 14912312 intron DCX-EMAP + chr3L_11_14910001 chr3L_14910001 RAL-531 1373 chr3L 14913897 14913933 chr3L 14913979 14914030 9 84 3.5 2.0 2.8 2.4 133 chr3L 14913897 intron DCX-EMAP + chr3L 14913964 intron DCX-EMAP + chr3L 14914030 intron DCX-EMAP + chr3L_9_14910001 chr3L_14910001 RAL-531 1374 chr3L 14917097 14917107 chr3L 14917270 14917280 5 173 5.5 1.0 3.2 1.2 183 chr3L 14917097 intron DCX-EMAP + chr3L 14917188 intron DCX-EMAP + chr3L 14917280 intron DCX-EMAP + chr3L_5_14915001 chr3L_14915001 RAL-531 1375 chr3L 14959968 14960016 chr3L 14960072 14960120 19 104 3.5 3.5 3.5 4.2 152 chr3L 14959968 intergenic not near genes chr3L 14960044 intergenic not near genes chr3L 14960120 intergenic not near genes chr3L_19_14960001 chr3L_14960001 RAL-531 1376 chr3L 14970746 14970764 chr3L 14971069 14971094 F-element 9 329 9.5 6.5 8.0 1.0 348 chr3L 14970746 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971094 intergenic not near genes chr3L_9_14970001 chr3L_14970001 RAL-531 1377 chr3L 14993417 14993431 chr3L 14993498 14993553 7 104 4.5 3.0 3.8 1.5 136 chr3L 14993417 intron Zip71B + chr3L 14993485 intron Zip71B + chr3L 14993553 intron Zip71B + chr3L_7_14990001 chr3L_14990001 RAL-531 1378 chr3L 15048116 15048140 chr3L 15048473 15048504 11 347 34.5 30.0 32.2 0.3 388 chr3L 15048116 intron Sytbeta - chr3L 15048310 intron Sytbeta - chr3L 15048504 intron Sytbeta - chr3L_11_15045001 chr3L_15045001 RAL-531 1379 chr3L 15053401 15053449 chr3L 15053757 15053808 8 356 2.0 4.5 3.2 1.9 407 chr3L 15053401 intron Sytbeta - chr3L 15053604 intron,3` UTR Sytbeta -,CG18649 - chr3L 15053808 intron,3` UTR Sytbeta -,CG18649 - chr3L_8_15050001 chr3L_15050001 RAL-531 1380 chr3L 15085028 15085071 chr3L 15086214 15086252 1360 11 1184 4.0 1.5 2.8 2.9 1224 chr3L 15085028 intron cp309 - chr3L 15085640 intron cp309 - chr3L 15086252 intron cp309 - chr3L_11_15085001 chr3L_15085001 RAL-531 1381 chr3L 15094953 15094959 chr3L 15095069 15095070 4 115 8.5 4.0 6.2 0.6 117 chr3L 15094953 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095012 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095070 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_4_15095001 chr3L_15095001 RAL-531 1382 chr3L 15102025 15102032 chr3L 15102608 15102614 4 582 10.5 17.0 13.8 0.3 589 chr3L 15102025 intron,3` UTR CTPsyn +,CR43972 - chr3L 15102320 intron CTPsyn + chr3L 15102614 intron CTPsyn + chr3L_4_15100001 chr3L_15100001 RAL-531 1383 chr3L 15165027 15165037 chr3L 15165146 15165155 5 119 3.0 0.0 1.5 2.0 128 chr3L 15165027 intergenic not near genes chr3L 15165091 intergenic not near genes chr3L 15165155 intergenic not near genes chr3L_5_15165001 chr3L_15165001 RAL-531 1384 chr3L 15295751 15295769 chr3L 15298614 15298632 gypsy5 5 2863 8.5 6.5 7.5 0.6 2881 chr3L 15295751 intergenic not near genes chr3L 15297192 intergenic not near genes chr3L 15298632 intergenic Best4 + chr3L_5_15295001 chr3L_15295001 RAL-531 1385 chr3L 15295771 15295796 chr3L 15298611 15298659 gypsy5 7 2859 4.0 6.0 5.0 1.2 2888 chr3L 15295771 intergenic not near genes chr3L 15297215 intergenic not near genes chr3L 15298659 intergenic Best4 + chr3L_7_15295001 chr3L_15295001 RAL-531 1386 chr3L 15324374 15324399 chr3L 15324460 15324503 8 100 2.0 3.0 2.5 2.3 129 chr3L 15324374 intergenic not near genes chr3L 15324438 intergenic not near genes chr3L 15324503 intergenic not near genes chr3L_8_15320001 chr3L_15320001 RAL-531 1387 chr3L 15405999 15406048 chr3L 15406101 15406151 6 102 2.5 3.5 3.0 1.5 152 chr3L 15405999 intergenic not near genes chr3L 15406075 intergenic not near genes chr3L 15406151 intergenic not near genes chr3L_6_15405001 chr3L_15405001 RAL-531 1388 chr3L 15415230 15415268 chr3L 15415382 15415420 16 152 4.0 5.5 4.8 2.8 190 chr3L 15415230 intergenic not near genes chr3L 15415325 intergenic not near genes chr3L 15415420 intergenic not near genes chr3L_16_15415001 chr3L_15415001 RAL-531 1389 chr3L 15423749 15423781 chr3L 15426613 15426645 opus 10 2864 6.0 6.5 6.2 1.4 2896 chr3L 15423749 intergenic not near genes chr3L 15425197 intergenic not near genes chr3L 15426645 intergenic not near genes chr3L_10_15425001 chr3L_15425001 RAL-531 1390 chr3L 15443573 15443601 chr3L 15443669 15443685 6 94 6.0 3.5 4.8 1.0 112 chr3L 15443573 intergenic not near genes chr3L 15443629 intergenic not near genes chr3L 15443685 intergenic not near genes chr3L_6_15440001 chr3L_15440001 RAL-531 1391 chr3L 15466018 15466035 chr3L 15466120 15466137 6 102 3.5 0.0 1.8 2.1 119 chr3L 15466018 intergenic not near genes chr3L 15466078 intergenic not near genes chr3L 15466137 intergenic not near genes chr3L_6_15465001 chr3L_15465001 RAL-531 1392 chr3L 15575952 15575988 chr3L 15576061 15576107 8 115 2.5 2.5 2.5 2.3 155 chr3L 15575952 3` UTR CG6498 + chr3L 15576030 3` UTR CG6498 + chr3L 15576107 3` UTR CG6498 + chr3L_8_15575001 chr3L_15575001 RAL-531 1393 chr3L 5613541 5613547 chr3L 15588410 15588416 4 9974869 0.0 15.0 7.5 0.5 9974875 chr3L 5613541 intergenic not near genes chr3L 10600978 intergenic not near genes chr3L 15588416 intergenic RhoGAP71E + chr3L_4_10600001 chr3L_10600001 RAL-531 1394 chr3L 15615915 15615949 chr3L 15616031 15616065 9 114 8.0 6.0 7.0 1.1 150 chr3L 15615915 intron comm3 - chr3L 15615990 intron comm3 - chr3L 15616065 intron comm3 - chr3L_9_15615001 chr3L_15615001 RAL-531 1395 chr3L 15633166 15633216 chr3L 15633266 15633316 17 99 2.0 6.0 4.0 3.4 150 chr3L 15633166 intron comm3 - chr3L 15633241 intron comm3 - chr3L 15633316 intron comm3 - chr3L_17_15630001 chr3L_15630001 RAL-531 1396 chr3L 15641779 15641813 chr3L 15641882 15641918 5 102 0.0 2.0 1.0 2.5 139 chr3L 15641779 intron comm3 - chr3L 15641848 intron comm3 - chr3L 15641918 intron comm3 - chr3L_5_15640001 chr3L_15640001 RAL-531 1397 chr3L 15744585 15744605 chr3L 15745039 15745069 12 456 26.5 27.0 26.8 0.4 484 chr3L 15744585 intergenic not near genes chr3L 15744827 intergenic not near genes chr3L 15745069 intergenic not near genes chr3L_12_15740001 chr3L_15740001 RAL-531 1398 chr3L 15760662 15760714 chr3L 15760767 15760817 6 103 3.0 2.5 2.8 1.6 155 chr3L 15760662 intergenic not near genes chr3L 15760740 intergenic not near genes chr3L 15760817 intergenic not near genes chr3L_6_15760001 chr3L_15760001 RAL-531 1399 chr3L 15781639 15781676 chr3L 15781789 15781845 5 160 0.0 0.0 0.0 5.0 206 chr3L 15781639 intergenic not near genes chr3L 15781742 intergenic not near genes chr3L 15781845 intergenic not near genes chr3L_5_15780001 chr3L_15780001 RAL-531 1400 chr3L 15871596 15871611 chr3L 15871699 15871715 5 104 1.5 4.0 2.8 1.3 119 chr3L 15871596 intron pHCl - chr3L 15871656 intron pHCl - chr3L 15871715 intron pHCl - chr3L_5_15870001 chr3L_15870001 RAL-531 1401 chr3L 15904898 15904943 chr3L 15905015 15905040 6 110 3.5 0.5 2.0 2.0 142 chr3L 15904898 intron sff - chr3L 15904969 intron sff - chr3L 15905040 intron sff - chr3L_6_15900001 chr3L_15900001 RAL-531 1402 chr3L 15929180 15929225 chr3L 15938346 15938392 roo 15 9167 7.5 4.5 6.0 2.1 9212 chr3L 15929180 intron Pka-C3 - chr3L 15933786 intron Pka-C3 - chr3L 15938392 intron Pka-C3 - chr3L_15_15930001 chr3L_15930001 RAL-531 1403 chr3L 15946482 15946490 chr3L 15946588 15946596 4 106 12.0 0.0 6.0 0.6 114 chr3L 15946482 intron Pka-C3 - chr3L 15946539 intron Pka-C3 - chr3L 15946596 intron Pka-C3 - chr3L_4_15945001 chr3L_15945001 RAL-531 1404 chr3L 15948743 15948767 chr3L 15948827 15948835 6 85 4.5 2.5 3.5 1.3 92 chr3L 15948743 intron Pka-C3 - chr3L 15948789 intron Pka-C3 - chr3L 15948835 intron Pka-C3 - chr3L_6_15945001 chr3L_15945001 RAL-531 1405 chr3L 16015816 16015865 chr3L 16015914 16015963 11 95 3.0 8.5 5.8 1.6 147 chr3L 16015816 intergenic not near genes chr3L 16015890 intergenic not near genes chr3L 16015963 intergenic not near genes chr3L_11_16015001 chr3L_16015001 RAL-531 1406 chr3L 16070722 16070757 chr3L 16070819 16070842 13 96 4.0 3.0 3.5 2.9 120 chr3L 16070722 intron Mbs + chr3L 16070782 intron Mbs + chr3L 16070842 exon Mbs + chr3L_13_16070001 chr3L_16070001 RAL-531 1407 chr3L 16158803 16158836 chr3L 16158908 16158941 11 104 1.0 7.5 4.2 2.1 138 chr3L 16158803 intron CG5151 - chr3L 16158872 intron CG5151 - chr3L 16158941 intron CG5151 - chr3L_11_16155001 chr3L_16155001 RAL-531 1408 chr3L 16184089 16184137 chr3L 16188928 16188949 X-element 8 4832 6.5 1.0 3.8 1.7 4860 chr3L 16184089 intergenic not near genes chr3L 16186519 intergenic not near genes chr3L 16188949 intergenic not near genes chr3L_8_16185001 chr3L_16185001 RAL-531 1409 chr3L 16214624 16214676 chr3L 16214741 16214793 25 117 3.0 5.0 4.0 5.0 169 chr3L 16214624 intron CG13073 - chr3L 16214708 intron CG13073 - chr3L 16214793 intron CG13073 - chr3L_25_16210001 chr3L_16210001 RAL-531 1410 chr3L 16243172 16243186 chr3L 16243247 16243247 4 72 2.0 1.0 1.5 1.6 75 chr3L 16243172 intergenic not near genes chr3L 16243210 intergenic not near genes chr3L 16243247 intergenic not near genes chr3L_4_16240001 chr3L_16240001 RAL-531 1411 chr3L 16304847 16304888 chr3L 16304945 16304975 7 90 3.5 4.0 3.8 1.5 128 chr3L 16304847 intergenic CG43249 +,CG13043 - chr3L 16304911 intergenic CG43249 +,CG13043 - chr3L 16304975 intergenic CG13043 -,CG43249 + chr3L_7_16300001 chr3L_16300001 RAL-531 1412 chr3L 16316769 16316775 chr3L 16316987 16316993 4 218 5.5 3.0 4.2 0.8 224 chr3L 16316769 intergenic not near genes chr3L 16316881 intergenic not near genes chr3L 16316993 intergenic not near genes chr3L_4_16315001 chr3L_16315001 RAL-531 1413 chr3L 16457527 16457558 chr3L 16457624 16457673 7 112 3.0 2.5 2.8 1.8 146 chr3L 16457527 intron CG33158 + chr3L 16457600 intron CG33158 + chr3L 16457673 intron CG33158 + chr3L_7_16455001 chr3L_16455001 RAL-531 1414 chr3L 16493959 16493988 chr3L 16494496 16494500 jockey 4 528 8.5 3.5 6.0 0.6 541 chr3L 16493959 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494230 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494500 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_4_16490001 chr3L_16490001 RAL-531 1415 chr3L 16493989 16494003 chr3L 16494493 16494529 jockey 8 526 9.0 3.0 6.0 1.1 540 chr3L 16493989 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494259 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494529 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_8_16490001 chr3L_16490001 RAL-531 1416 chr3L 16533572 16533585 chr3L 16533692 16533715 6 126 3.5 4.5 4.0 1.2 143 chr3L 16533572 intron CG43373 - chr3L 16533644 intron CG43373 - chr3L 16533715 intron CG43373 - chr3L_6_16530001 chr3L_16530001 RAL-531 1417 chr3L 16540034 16540074 chr3L 16540142 16540182 20 107 4.5 3.5 4.0 4.0 148 chr3L 16540034 intron CG43373 - chr3L 16540108 intron CG43373 - chr3L 16540182 intron CG43373 - chr3L_20_16540001 chr3L_16540001 RAL-531 1418 chr3L 16542761 16542803 chr3L 16542896 16542944 22 139 4.0 2.5 3.2 5.2 183 chr3L 16542761 intron CG43373 - chr3L 16542852 intron CG43373 - chr3L 16542944 intron CG43373 - chr3L_22_16540001 chr3L_16540001 RAL-531 1419 chr3L 16547338 16547363 chr3L 16547602 16547634 5 269 3.5 1.0 2.2 1.6 296 chr3L 16547338 intergenic not near genes chr3L 16547486 intergenic not near genes chr3L 16547634 intergenic not near genes chr3L_5_16545001 chr3L_16545001 RAL-531 1420 chr3L 16616505 16616540 chr3L 16621842 16621888 297 10 5342 5.5 4.5 5.0 1.7 5383 chr3L 16616505 3` UTR Abl - chr3L 16619196 3` UTR Abl - chr3L 16621888 3` UTR Abl - chr3L_10_16615001 chr3L_16615001 RAL-531 1421 chr3L 16684006 16684043 chr3L 16689247 16689284 copia 22 5241 5.0 5.0 5.0 3.7 5278 chr3L 16684006 intron,intron Lasp -,CG43954 - chr3L 16686645 intron,intron Lasp -,CG43954 - chr3L 16689284 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_22_16685001 chr3L_16685001 RAL-531 1422 chr3L 16728078 16728115 chr3L 16728183 16728213 4 105 5.0 0.0 2.5 1.1 135 chr3L 16728078 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728146 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728213 intergenic PGRP-SB1 -,Dbp73D - chr3L_4_16725001 chr3L_16725001 RAL-531 1423 chr3L 16757624 16757658 chr3L 16757734 16757768 22 109 6.0 5.0 5.5 3.4 144 chr3L 16757624 intergenic not near genes chr3L 16757696 intergenic not near genes chr3L 16757768 intergenic not near genes chr3L_22_16755001 chr3L_16755001 RAL-531 1424 chr3L 16764558 16764609 chr3L 16764670 16764729 7 118 4.5 0.0 2.2 2.2 171 chr3L 16764558 intergenic not near genes chr3L 16764644 intergenic not near genes chr3L 16764729 intergenic not near genes chr3L_7_16760001 chr3L_16760001 RAL-531 1425 chr3L 16770451 16770480 chr3L 16770557 16770587 8 106 0.5 3.0 1.8 2.9 136 chr3L 16770451 intron Nrt + chr3L 16770519 intron Nrt + chr3L 16770587 intron Nrt + chr3L_8_16770001 chr3L_16770001 RAL-531 1426 chr3L 16805010 16805040 chr3L 16805140 16805175 7 133 3.5 4.0 3.8 1.5 165 chr3L 16805010 intron,5` UTR CG9674 -,nudC + chr3L 16805092 intron,5` UTR CG9674 -,nudC + chr3L 16805175 intron,5` UTR CG9674 -,nudC + chr3L_7_16805001 chr3L_16805001 RAL-531 1427 chr3L 16808020 16808074 chr3L 16808116 16808173 16 95 4.0 1.5 2.8 4.2 153 chr3L 16808020 intron nudC + chr3L 16808096 intron nudC + chr3L 16808173 intron nudC + chr3L_16_16805001 chr3L_16805001 RAL-531 1428 chr3L 16815834 16815891 chr3L 16815940 16815994 11 103 0.0 2.0 1.0 5.5 160 chr3L 16815834 intron,intron nudC +,CG13024 - chr3L 16815914 intron,intron nudC +,CG13024 - chr3L 16815994 intron,intron nudC +,CG13024 - chr3L_11_16815001 chr3L_16815001 RAL-531 1429 chr3L 16818737 16818778 chr3L 16818833 16818874 15 95 3.5 5.5 4.5 2.7 137 chr3L 16818737 intron,intron nudC +,CG13024 - chr3L 16818806 intron,intron nudC +,CG13024 - chr3L 16818874 intron,intron nudC +,CG13024 - chr3L_15_16815001 chr3L_16815001 RAL-531 1430 chr3L 16826193 16826206 chr3L 16826489 16826507 4 296 7.5 4.5 6.0 0.6 314 chr3L 16826193 intron CG13024 - chr3L 16826350 intron CG13024 - chr3L 16826507 intron CG13024 - chr3L_4_16825001 chr3L_16825001 RAL-531 1431 chr3L 16826209 16826231 chr3L 16826488 16826529 4 294 2.5 4.0 3.2 1.0 320 chr3L 16826209 intron CG13024 - chr3L 16826369 intron CG13024 - chr3L 16826529 intron CG13024 - chr3L_4_16825001 chr3L_16825001 RAL-531 1432 chr3L 16837464 16837473 chr3L 16837547 16837576 5 99 0.0 6.5 3.2 1.2 112 chr3L 16837464 intergenic not near genes chr3L 16837520 intergenic not near genes chr3L 16837576 intergenic not near genes chr3L_5_16835001 chr3L_16835001 RAL-531 1433 chr3L 16845005 16845044 chr3L 16845138 16845176 16 132 2.0 6.0 4.0 3.2 171 chr3L 16845005 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845176 intergenic CG9669 -,CG9715 + chr3L_16_16845001 chr3L_16845001 RAL-531 1434 chr3L 16866198 16866219 chr3L 16866302 16866330 10 110 0.5 1.5 1.0 5.0 132 chr3L 16866198 intron Lmpt + chr3L 16866264 intron Lmpt + chr3L 16866330 intron Lmpt + chr3L_10_16865001 chr3L_16865001 RAL-531 1435 chr3L 16866235 16866242 chr3L 16866345 16866352 4 110 0.5 7.0 3.8 0.8 117 chr3L 16866235 intron Lmpt + chr3L 16866294 intron Lmpt + chr3L 16866352 intron Lmpt + chr3L_4_16865001 chr3L_16865001 RAL-531 1436 chr3L 16870845 16870893 chr3L 16870957 16871004 12 111 3.0 3.0 3.0 3.0 159 chr3L 16870845 intron Lmpt + chr3L 16870924 intron Lmpt + chr3L 16871004 intron Lmpt + chr3L_12_16870001 chr3L_16870001 RAL-531 1437 chr3L 16941382 16941407 chr3L 16941501 16941524 8 120 2.5 0.0 1.2 3.6 142 chr3L 16941382 intron Cpr73D - chr3L 16941453 intron Cpr73D - chr3L 16941524 intron Cpr73D - chr3L_8_16940001 chr3L_16940001 RAL-531 1438 chr3L 16945713 16945752 chr3L 16954884 16954893 roo 12 9161 4.0 5.0 4.5 2.2 9180 chr3L 16945713 exon Obp73a + chr3L 16950303 intergenic not near genes chr3L 16954893 5` UTR Nc73EF + chr3L_12_16950001 chr3L_16950001 RAL-531 1439 chr3L 17034916 17034965 chr3L 17035124 17035173 G2 17 208 1.5 2.5 2.0 5.7 257 chr3L 17034916 intergenic not near genes chr3L 17035044 intergenic not near genes chr3L 17035173 intergenic beg + chr3L_17_17035001 chr3L_17035001 RAL-531 1440 chr3L 17084984 17085032 chr3L 17094153 17094197 roo 17 9169 6.5 5.5 6.0 2.4 9213 chr3L 17084984 intron Rbp6 - chr3L 17089590 intron Rbp6 - chr3L 17094197 intron Rbp6 - chr3L_17_17085001 chr3L_17085001 RAL-531 1441 chr3L 17149146 17149163 chr3L 17149247 17149264 5 101 11.0 0.5 5.8 0.7 118 chr3L 17149146 intron Rbp6 - chr3L 17149205 intron Rbp6 - chr3L 17149264 intron Rbp6 - chr3L_5_17145001 chr3L_17145001 RAL-531 1442 chr3L 17237364 17237388 chr3L 17237535 17237560 7 172 9.5 0.0 4.8 1.2 196 chr3L 17237364 intron Rbp6 - chr3L 17237462 intron Rbp6 - chr3L 17237560 intron Rbp6 - chr3L_7_17235001 chr3L_17235001 RAL-531 1443 chr3L 17268974 17269023 chr3L 17269086 17269135 16 112 3.0 3.5 3.2 3.8 161 chr3L 17268974 intergenic not near genes chr3L 17269054 intergenic not near genes chr3L 17269135 intergenic not near genes chr3L_16_17265001 chr3L_17265001 RAL-531 1444 chr3L 17310050 17310090 chr3L 17310162 17310198 5 110 0.0 4.5 2.2 1.6 148 chr3L 17310050 intergenic not near genes chr3L 17310124 intergenic not near genes chr3L 17310198 intergenic not near genes chr3L_5_17310001 chr3L_17310001 RAL-531 1445 chr3L 17331043 17331095 chr3L 17331152 17331205 15 108 5.0 3.5 4.2 2.9 162 chr3L 17331043 intergenic not near genes chr3L 17331124 intergenic not near genes chr3L 17331205 intergenic not near genes chr3L_15_17330001 chr3L_17330001 RAL-531 1446 chr3L 17367417 17367455 chr3L 17367531 17367569 12 114 3.5 5.0 4.2 2.3 152 chr3L 17367417 intergenic CR45688 +,Cad74A - chr3L 17367493 intergenic CR45688 +,Cad74A - chr3L 17367569 intergenic Cad74A -,CR45688 + chr3L_12_17365001 chr3L_17365001 RAL-531 1447 chr3L 17411045 17411089 chr3L 17411142 17411186 14 96 5.0 3.0 4.0 2.8 141 chr3L 17411045 intron blot - chr3L 17411116 intron blot - chr3L 17411186 intron blot - chr3L_14_17410001 chr3L_17410001 RAL-531 1448 chr3L 17498083 17498113 chr3L 17498180 17498210 6 95 2.0 4.5 3.2 1.4 127 chr3L 17498083 intron Oatp74D + chr3L 17498146 intron Oatp74D + chr3L 17498210 intron Oatp74D + chr3L_6_17495001 chr3L_17495001 RAL-531 1449 chr3L 17507257 17507309 chr3L 17507361 17507412 17 103 2.0 4.5 3.2 4.0 155 chr3L 17507257 intron Oatp74D + chr3L 17507334 intron Oatp74D + chr3L 17507412 intron Oatp74D + chr3L_17_17505001 chr3L_17505001 RAL-531 1450 chr3L 17585315 17585359 chr3L 17585619 17585664 17 305 28.0 45.0 36.5 0.5 349 chr3L 17585315 intron Eip74EF - chr3L 17585490 intron Eip74EF - chr3L 17585664 intron Eip74EF - chr3L_17_17585001 chr3L_17585001 RAL-531 1451 chr3L 17586945 17586992 chr3L 17587099 17587146 16 153 4.0 2.0 3.0 4.0 201 chr3L 17586945 intron Eip74EF - chr3L 17587046 intron Eip74EF - chr3L 17587146 intron Eip74EF - chr3L_16_17585001 chr3L_17585001 RAL-531 1452 chr3L 17678880 17678900 chr3L 17678984 17679004 8 104 4.0 0.5 2.2 2.5 124 chr3L 17678880 intron CG34251 + chr3L 17678942 intron CG34251 + chr3L 17679004 intron CG34251 + chr3L_8_17675001 chr3L_17675001 RAL-531 1453 chr3L 17730839 17730879 chr3L 17738181 17738229 mdg1 19 7349 3.5 4.0 3.8 4.0 7390 chr3L 17730839 intron Ccn + chr3L 17734534 intron Ccn + chr3L 17738229 intron Ccn + chr3L_19_17730001 chr3L_17730001 RAL-531 1454 chr3L 17790629 17790635 chr3L 17790906 17790920 4 281 0.0 5.5 2.8 1.1 291 chr3L 17790629 intergenic CG42815 - chr3L 17790774 intergenic CG42815 - chr3L 17790920 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 RAL-531 1455 chr3L 17799790 17799841 chr3L 17801597 17801648 S-element 26 1807 3.5 5.5 4.5 4.7 1858 chr3L 17799790 intron NUCB1 - chr3L 17800719 intron NUCB1 - chr3L 17801648 intron NUCB1 - chr3L_26_17800001 chr3L_17800001 RAL-531 1456 chr3L 17884675 17884712 chr3L 17884795 17884832 10 120 3.0 5.0 4.0 2.0 157 chr3L 17884675 intergenic CG5506 - chr3L 17884754 intergenic CG5506 - chr3L 17884832 intergenic CG5506 - chr3L_10_17880001 chr3L_17880001 RAL-531 1457 chr3L 17887857 17887872 chr3L 17887962 17887977 11 105 4.0 9.5 6.8 1.4 120 chr3L 17887857 intron CG7402 + chr3L 17887917 intron CG7402 + chr3L 17887977 intron CG7402 + chr3L_11_17885001 chr3L_17885001 RAL-531 1458 chr3L 17898909 17898960 chr3L 17899005 17899056 19 94 7.0 5.5 6.2 2.6 147 chr3L 17898909 3` UTR Prestin - chr3L 17898982 3` UTR Prestin - chr3L 17899056 3` UTR Prestin - chr3L_19_17895001 chr3L_17895001 RAL-531 1459 chr3L 17918365 17918405 chr3L 17921188 17921213 opus 9 2820 0.5 5.0 2.8 2.4 2848 chr3L 17918365 intergenic not near genes chr3L 17919789 intergenic not near genes chr3L 17921213 intergenic not near genes chr3L_9_17915001 chr3L_17915001 RAL-531 1460 chr3L 17991558 17991584 chr3L 17991656 17991682 10 97 5.5 3.5 4.5 1.8 124 chr3L 17991558 intron Eip75B - chr3L 17991620 intron Eip75B - chr3L 17991682 intron Eip75B - chr3L_10_17990001 chr3L_17990001 RAL-531 1461 chr3L 18000653 18000706 chr3L 18000750 18000803 14 92 2.0 2.5 2.2 4.4 150 chr3L 18000653 intron Eip75B - chr3L 18000728 intron Eip75B - chr3L 18000803 intron Eip75B - chr3L_14_18000001 chr3L_18000001 RAL-531 1462 chr3L 18029938 18029970 chr3L 18030035 18030067 10 97 7.5 0.0 3.8 2.1 129 chr3L 18029938 intron Eip75B - chr3L 18030002 intron Eip75B - chr3L 18030067 intron Eip75B - chr3L_10_18030001 chr3L_18030001 RAL-531 1463 chr3L 18047686 18047728 chr3L 18056762 18056803 roo 13 9075 5.0 4.5 4.8 2.2 9117 chr3L 18047686 intron Eip75B - chr3L 18052244 intron Eip75B - chr3L 18056803 intron Eip75B - chr3L_13_18050001 chr3L_18050001 RAL-531 1464 chr3L 18064046 18064077 chr3L 18064152 18064183 7 106 4.5 7.0 5.8 1.0 137 chr3L 18064046 intron Eip75B - chr3L 18064114 intron Eip75B - chr3L 18064183 intron Eip75B - chr3L_7_18060001 chr3L_18060001 RAL-531 1465 chr3L 18075227 18075254 chr3L 18075512 18075539 10 285 6.5 2.0 4.2 1.9 312 chr3L 18075227 intergenic not near genes chr3L 18075383 intergenic not near genes chr3L 18075539 intergenic not near genes chr3L_10_18075001 chr3L_18075001 RAL-531 1466 chr3L 18152712 18152753 chr3L 18152843 18152883 6 131 1.5 2.5 2.0 2.0 171 chr3L 18152712 intron CG7330 + chr3L 18152798 intron CG7330 + chr3L 18152883 intron CG7330 + chr3L_6_18150001 chr3L_18150001 RAL-531 1467 chr3L 18172673 18172703 chr3L 18172769 18172799 11 94 9.5 5.0 7.2 1.3 126 chr3L 18172673 intron W - chr3L 18172736 intron W - chr3L 18172799 intron W - chr3L_11_18170001 chr3L_18170001 RAL-531 1468 chr3L 18198930 18198931 chr3L 24821492 24821494 4 6622563 0.0 5.5 2.8 1.1 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-531 1469 chr3L 18223153 18223185 chr3L 18223256 18223300 9 107 1.5 0.0 0.8 5.0 147 chr3L 18223153 intergenic not near genes chr3L 18223226 intergenic not near genes chr3L 18223300 intergenic not near genes chr3L_9_18220001 chr3L_18220001 RAL-531 1470 chr3L 18248938 18248981 chr3L 18249056 18249099 7 118 4.5 0.5 2.5 2.0 161 chr3L 18248938 intergenic not near genes chr3L 18249018 intergenic not near genes chr3L 18249099 intergenic not near genes chr3L_7_18245001 chr3L_18245001 RAL-531 1471 chr3L 18262467 18262486 chr3L 18262573 18262592 8 106 5.5 6.5 6.0 1.1 125 chr3L 18262467 intergenic not near genes chr3L 18262530 intergenic not near genes chr3L 18262592 intergenic not near genes chr3L_8_18260001 chr3L_18260001 RAL-531 1472 chr3L 18420070 18420091 chr3L 18420153 18420195 6 96 1.0 2.5 1.8 2.1 125 chr3L 18420070 intergenic not near genes chr3L 18420132 intergenic not near genes chr3L 18420195 intergenic not near genes chr3L_6_18420001 chr3L_18420001 RAL-531 1473 chr3L 18445235 18445261 chr3L 18445332 18445359 9 97 8.0 4.0 6.0 1.3 124 chr3L 18445235 intergenic not near genes chr3L 18445297 intergenic not near genes chr3L 18445359 intergenic not near genes chr3L_9_18445001 chr3L_18445001 RAL-531 1474 chr3L 18448599 18448619 chr3L 18448709 18448731 6 112 7.0 4.0 5.5 0.9 132 chr3L 18448599 intergenic not near genes chr3L 18448665 intergenic not near genes chr3L 18448731 intergenic not near genes chr3L_6_18445001 chr3L_18445001 RAL-531 1475 chr3L 18456256 18456300 chr3L 18456364 18456408 9 106 2.5 3.5 3.0 2.2 152 chr3L 18456256 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456408 3` UTR CR44670 - chr3L_9_18455001 chr3L_18455001 RAL-531 1476 chr3L 18506119 18506154 chr3L 18509592 18509637 F-element 6 3479 6.5 2.5 4.5 1.1 3518 chr3L 18506119 intergenic not near genes chr3L 18507878 intergenic not near genes chr3L 18509637 intergenic not near genes chr3L_6_18505001 chr3L_18505001 RAL-531 1477 chr3L 18528609 18528652 chr3L 18537790 18537833 roo 13 9181 5.5 4.0 4.8 2.2 9224 chr3L 18528609 intergenic not near genes chr3L 18533221 intergenic not near genes chr3L 18537833 intergenic not near genes chr3L_13_18530001 chr3L_18530001 RAL-531 1478 chr3L 18538627 18538658 chr3L 18539125 18539154 4 497 3.5 2.5 3.0 1.0 527 chr3L 18538627 intergenic not near genes chr3L 18538890 intergenic not near genes chr3L 18539154 intergenic not near genes chr3L_4_18535001 chr3L_18535001 RAL-531 1479 chr3L 18593930 18593974 chr3L 18595930 18595958 Doc 18 1999 5.0 0.0 2.5 5.1 2028 chr3L 18593930 intergenic term - chr3L 18594944 intergenic not near genes chr3L 18595958 intergenic CR45389 + chr3L_18_18590001 chr3L_18590001 RAL-531 1480 chr3L 18606738 18606778 chr3L 18606945 18606967 17 203 2.5 2.0 2.2 5.3 229 chr3L 18606738 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606852 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606967 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_17_18605001 chr3L_18605001 RAL-531 1481 chr3L 18656164 18656200 chr3L 18656269 18656285 10 100 5.0 1.5 3.2 2.4 121 chr3L 18656164 intron MYPT-75D + chr3L 18656224 intron MYPT-75D + chr3L 18656285 intron MYPT-75D + chr3L_10_18655001 chr3L_18655001 RAL-531 1482 chr3L 18701120 18701140 chr3L 18701226 18701247 5 107 3.0 3.0 3.0 1.2 127 chr3L 18701120 intergenic not near genes chr3L 18701184 intergenic not near genes chr3L 18701247 intergenic not near genes chr3L_5_18700001 chr3L_18700001 RAL-531 1483 chr3L 18710744 18710792 chr3L 18718716 18718764 Stalker2 26 7970 5.0 5.0 5.0 4.3 8020 chr3L 18710744 intergenic not near genes chr3L 18714754 intergenic not near genes chr3L 18718764 intergenic not near genes chr3L_26_18710001 chr3L_18710001 RAL-531 1484 chr3L 18736036 18736060 chr3L 18736151 18736175 10 114 4.5 6.0 5.2 1.6 139 chr3L 18736036 intergenic not near genes chr3L 18736106 intergenic not near genes chr3L 18736175 intergenic not near genes chr3L_10_18735001 chr3L_18735001 RAL-531 1485 chr3L 18772391 18772442 chr3L 18781092 18781122 roo 11 8697 3.0 3.0 3.0 2.8 8731 chr3L 18772391 intron ftz-f1 - chr3L 18776756 intron ftz-f1 - chr3L 18781122 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 RAL-531 1486 chr3L 18784382 18784405 chr3L 18784491 18784514 11 108 5.0 8.5 6.8 1.4 132 chr3L 18784382 intron ftz-f1 - chr3L 18784448 intron ftz-f1 - chr3L 18784514 intron ftz-f1 - chr3L_11_18780001 chr3L_18780001 RAL-531 1487 chr3L 18797291 18797331 chr3L 18797395 18797435 10 102 5.5 1.5 3.5 2.2 144 chr3L 18797291 intron ftz-f1 - chr3L 18797363 intron ftz-f1 - chr3L 18797435 intron ftz-f1 - chr3L_10_18795001 chr3L_18795001 RAL-531 1488 chr3L 18810127 18810176 chr3L 18810224 18810278 12 101 5.5 2.0 3.8 2.5 151 chr3L 18810127 intron CG14073 - chr3L 18810202 intron CG14073 - chr3L 18810278 intron CG14073 - chr3L_12_18810001 chr3L_18810001 RAL-531 1489 chr3L 18838731 18838773 chr3L 18838849 18838889 12 117 0.0 2.0 1.0 6.0 158 chr3L 18838731 intron Indy - chr3L 18838810 intron Indy - chr3L 18838889 intron Indy - chr3L_12_18835001 chr3L_18835001 RAL-531 1490 chr3L 18843849 18843878 chr3L 18843964 18843993 17 115 6.0 3.5 4.8 2.9 144 chr3L 18843849 intron Indy - chr3L 18843921 intron Indy - chr3L 18843993 intron Indy - chr3L_17_18840001 chr3L_18840001 RAL-531 1491 chr3L 18868943 18868995 chr3L 18869044 18869096 16 101 4.0 5.5 4.8 2.8 153 chr3L 18868943 3` UTR Dysb + chr3L 18869020 3` UTR Dysb + chr3L 18869096 3` UTR Dysb + chr3L_16_18865001 chr3L_18865001 RAL-531 1492 chr3L 18933609 18933654 chr3L 18933723 18933767 8 113 5.5 2.5 4.0 1.6 158 chr3L 18933609 intron CG32204 - chr3L 18933688 intron CG32204 - chr3L 18933767 intron CG32204 - chr3L_8_18930001 chr3L_18930001 RAL-531 1493 chr3L 18935824 18935865 chr3L 18935933 18935973 14 108 3.0 8.0 5.5 2.2 149 chr3L 18935824 intron CG32204 - chr3L 18935898 intron CG32204 - chr3L 18935973 intron CG32204 - chr3L_14_18935001 chr3L_18935001 RAL-531 1494 chr3L 18969544 18969576 chr3L 18969625 18969672 4 83 2.5 4.5 3.5 0.9 128 chr3L 18969544 intergenic not near genes chr3L 18969608 intergenic not near genes chr3L 18969672 intergenic not near genes chr3L_4_18965001 chr3L_18965001 RAL-531 1495 chr3L 19008835 19008853 chr3L 19009184 19009190 jockey 6 351 5.0 2.5 3.8 1.2 355 chr3L 19008835 intron nkd - chr3L 19009012 intron nkd - chr3L 19009190 intron nkd - chr3L_6_19005001 chr3L_19005001 RAL-531 1496 chr3L 19117034 19117065 chr3L 19124489 19124526 mdg1 5 7461 5.0 4.5 4.8 0.9 7492 chr3L 19117034 intron CG14082 - chr3L 19120780 intron CG14082 - chr3L 19124526 intron CG14082 - chr3L_5_19120001 chr3L_19120001 RAL-531 1497 chr3L 19138558 19138588 chr3L 19138642 19138663 6 90 3.5 4.5 4.0 1.2 105 chr3L 19138558 intron CG14082 - chr3L 19138610 intron CG14082 - chr3L 19138663 intron CG14082 - chr3L_6_19135001 chr3L_19135001 RAL-531 1498 chr3L 19208044 19208090 chr3L 19209436 19209484 Doc 12 1388 1.5 0.5 1.0 6.0 1440 chr3L 19208044 intron fz2 - chr3L 19208764 intron fz2 - chr3L 19209484 intron fz2 - chr3L_12_19205001 chr3L_19205001 RAL-531 1499 chr3L 19210106 19210140 chr3L 19210217 19210245 12 112 0.5 2.0 1.2 5.5 139 chr3L 19210106 intron fz2 - chr3L 19210176 intron fz2 - chr3L 19210245 intron fz2 - chr3L_12_19210001 chr3L_19210001 RAL-531 1500 chr3L 19274190 19274203 chr3L 19274263 19274277 4 81 5.0 5.0 5.0 0.7 87 chr3L 19274190 intergenic CG14085 + chr3L 19274234 intergenic CG14085 + chr3L 19274277 intergenic CG14085 + chr3L_4_19270001 chr3L_19270001 RAL-531 1501 chr3L 19295787 19295830 chr3L 19295933 19295976 15 144 5.0 5.5 5.2 2.4 189 chr3L 19295787 intron fal + chr3L 19295882 intron fal + chr3L 19295976 intron fal + chr3L_15_19295001 chr3L_19295001 RAL-531 1502 chr3L 19305096 19305108 chr3L 19305431 19305442 6 336 33.5 23.5 28.5 0.2 346 chr3L 19305096 intron pip - chr3L 19305269 intron pip - chr3L 19305442 intron pip - chr3L_6_19305001 chr3L_19305001 RAL-531 1503 chr3L 19305085 19305137 chr3L 19305459 19305471 6 342 33.0 21.5 27.2 0.2 386 chr3L 19305085 intron pip - chr3L 19305278 intron pip - chr3L 19305471 intron pip - chr3L_6_19305001 chr3L_19305001 RAL-531 1504 chr3L 19316234 19316279 chr3L 19316340 19316372 9 103 4.0 1.5 2.8 2.4 138 chr3L 19316234 intron pip - chr3L 19316303 intron pip - chr3L 19316372 intron pip - chr3L_9_19315001 chr3L_19315001 RAL-531 1505 chr3L 19323576 19323625 chr3L 19323759 19323806 12 174 2.5 3.0 2.8 3.2 230 chr3L 19323576 intron pip - chr3L 19323691 intron pip - chr3L 19323806 intron pip - chr3L_12_19320001 chr3L_19320001 RAL-531 1506 chr3L 19343609 19343621 chr3L 19343762 19343763 5 155 0.5 5.0 2.8 1.3 154 chr3L 19343609 exon CG32206 - chr3L 19343686 intron CG32206 - chr3L 19343763 intron CG32206 - chr3L_5_19340001 chr3L_19340001 RAL-531 1507 chr3L 19488494 19488498 chr3L 19488555 19488600 4 92 7.0 4.0 5.5 0.6 106 chr3L 19488494 intergenic pncr009:3L -,CG32212 + chr3L 19488547 intergenic pncr009:3L -,CG32212 + chr3L 19488600 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 RAL-531 1508 chr3L 19638772 19638807 chr3L 19638877 19638918 14 110 3.0 5.5 4.2 2.7 146 chr3L 19638772 3` UTR CG8786 - chr3L 19638845 3` UTR CG8786 - chr3L 19638918 3` UTR CG8786 - chr3L_14_19635001 chr3L_19635001 RAL-531 1509 chr3L 19695427 19695448 chr3L 19695515 19695546 5 93 1.5 3.0 2.2 1.6 119 chr3L 19695427 intergenic verm - chr3L 19695486 intergenic verm - chr3L 19695546 intergenic verm - chr3L_5_19695001 chr3L_19695001 RAL-531 1510 chr3L 19792343 19792369 chr3L 19792458 19792477 8 114 9.0 15.0 12.0 0.6 134 chr3L 19792343 intron,intron CG42637 -,Gyc76C - chr3L 19792410 intron,intron CG42637 -,Gyc76C - chr3L 19792477 intron,intron CG42637 -,Gyc76C - chr3L_8_19790001 chr3L_19790001 RAL-531 1511 chr3L 19820278 19820311 chr3L 19827847 19827880 412 10 7569 7.5 2.0 4.8 1.7 7602 chr3L 19820278 intron Deaf1 + chr3L 19824079 intron Deaf1 + chr3L 19827880 intron Deaf1 + chr3L_10_19820001 chr3L_19820001 RAL-531 1512 chr3L 19848483 19848533 chr3L 19857693 19857743 roo 13 9204 5.5 5.0 5.2 2.1 9260 chr3L 19848483 intron Papss + chr3L 19853113 intron Papss + chr3L 19857743 intron Papss + chr3L_13_19850001 chr3L_19850001 RAL-531 1513 chr3L 19861805 19861852 chr3L 19863610 19863660 S-element 9 1798 4.5 2.5 3.5 2.0 1855 chr3L 19861805 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863660 intergenic not near genes chr3L_9_19860001 chr3L_19860001 RAL-531 1514 chr3L 19871767 19871779 chr3L 19871880 19871895 4 114 1.5 8.0 4.8 0.7 128 chr3L 19871767 intron CG8334 + chr3L 19871831 intron CG8334 + chr3L 19871895 intron CG8334 + chr3L_4_19870001 chr3L_19870001 RAL-531 1515 chr3L 19930651 19930685 chr3L 19930754 19930781 9 102 5.5 3.5 4.5 1.6 130 chr3L 19930651 intron RhoGDI + chr3L 19930716 intron RhoGDI + chr3L 19930781 intron RhoGDI + chr3L_9_19930001 chr3L_19930001 RAL-531 1516 chr3L 19961274 19961294 chr3L 19961503 19961523 4 227 7.5 5.0 6.2 0.6 249 chr3L 19961274 intron Ac76E + chr3L 19961398 intron Ac76E + chr3L 19961523 intron Ac76E + chr3L_4_19960001 chr3L_19960001 RAL-531 1517 chr3L 19962937 19962974 chr3L 19963026 19963072 4 96 1.0 3.0 2.0 1.3 135 chr3L 19962937 intron Ac76E + chr3L 19963004 intron Ac76E + chr3L 19963072 intron Ac76E + chr3L_4_19960001 chr3L_19960001 RAL-531 1518 chr3L 19981186 19981234 chr3L 19981286 19981334 16 98 3.0 4.5 3.8 3.3 148 chr3L 19981186 intergenic CG17732 + chr3L 19981260 intergenic CG17732 + chr3L 19981334 intergenic CG17732 + chr3L_16_19980001 chr3L_19980001 RAL-531 1519 chr3L 20038798 20038847 chr3L 20038996 20039044 11 193 3.0 6.5 4.8 1.9 246 chr3L 20038798 intergenic not near genes chr3L 20038921 intergenic not near genes chr3L 20039044 intergenic not near genes chr3L_11_20035001 chr3L_20035001 RAL-531 1520 chr3L 20057563 20057571 chr3L 20057676 20057704 4 127 1.5 4.0 2.8 1.1 141 chr3L 20057563 intergenic not near genes chr3L 20057634 intergenic not near genes chr3L 20057704 intergenic not near genes chr3L_4_20055001 chr3L_20055001 RAL-531 1521 chr3L 20057572 20057588 chr3L 20057674 20057698 6 117 0.0 3.5 1.8 2.1 126 chr3L 20057572 intergenic not near genes chr3L 20057635 intergenic not near genes chr3L 20057698 intergenic not near genes chr3L_6_20055001 chr3L_20055001 RAL-531 1522 chr3L 20081722 20081767 chr3L 20081825 20081870 11 101 6.5 5.0 5.8 1.6 148 chr3L 20081722 intron sNPF-R - chr3L 20081796 intron sNPF-R - chr3L 20081870 intron sNPF-R - chr3L_11_20080001 chr3L_20080001 RAL-531 1523 chr3L 20096245 20096282 chr3L 20096373 20096410 13 124 3.0 3.5 3.2 3.1 165 chr3L 20096245 intergenic not near genes chr3L 20096328 intergenic not near genes chr3L 20096410 intergenic not near genes chr3L_13_20095001 chr3L_20095001 RAL-531 1524 chr3L 20113458 20113503 chr3L 20113571 20113618 15 114 2.0 4.5 3.2 3.6 160 chr3L 20113458 intergenic not near genes chr3L 20113538 intergenic not near genes chr3L 20113618 intergenic not near genes chr3L_15_20110001 chr3L_20110001 RAL-531 1525 chr3L 20113642 20113653 chr3L 20122919 20122929 roo 4 9276 13.5 4.5 9.0 0.4 9287 chr3L 20113642 intergenic not near genes chr3L 20118286 intergenic not near genes chr3L 20122929 intergenic not near genes chr3L_4_20115001 chr3L_20115001 RAL-531 1526 chr3L 20113656 20113688 chr3L 20122912 20122951 roo 5 9270 8.0 3.0 5.5 0.8 9295 chr3L 20113656 intergenic not near genes chr3L 20118304 intergenic not near genes chr3L 20122951 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RAL-531 1527 chr3L 20157945 20157999 chr3L 20158063 20158086 16 113 3.5 8.0 5.8 2.4 141 chr3L 20157945 intron CG42674 - chr3L 20158016 intron CG42674 - chr3L 20158086 intron CG42674 - chr3L_16_20155001 chr3L_20155001 RAL-531 1528 chr3L 20231067 20231115 chr3L 20231196 20231236 26 123 5.0 1.5 3.2 6.2 169 chr3L 20231067 intergenic not near genes chr3L 20231152 intergenic not near genes chr3L 20231236 intergenic CG13813 + chr3L_26_20230001 chr3L_20230001 RAL-531 1529 chr3L 20257312 20257363 chr3L 20258452 20258503 pogo 11 1138 3.0 3.0 3.0 2.8 1191 chr3L 20257312 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258503 intron rdgC + chr3L_11_20255001 chr3L_20255001 RAL-531 1530 chr3L 20283664 20283708 chr3L 20283761 20283812 10 100 3.0 3.0 3.0 2.5 148 chr3L 20283664 intron gogo - chr3L 20283738 intron gogo - chr3L 20283812 intron gogo - chr3L_10_20280001 chr3L_20280001 RAL-531 1531 chr3L 20395138 20395186 chr3L 20395257 20395305 10 119 7.5 0.5 4.0 2.0 167 chr3L 20395138 intergenic CR45677 - chr3L 20395222 intergenic CR45677 - chr3L 20395305 intergenic CR45677 - chr3L_10_20395001 chr3L_20395001 RAL-531 1532 chr3L 20409866 20409912 chr3L 20409972 20409994 16 100 3.0 2.5 2.8 4.2 128 chr3L 20409866 intron CG13248 - chr3L 20409930 intron CG13248 - chr3L 20409994 intron CG13248 - chr3L_16_20405001 chr3L_20405001 RAL-531 1533 chr3L 20462570 20462587 chr3L 20462671 20462682 8 99 12.0 0.0 6.0 1.1 112 chr3L 20462570 intron atk - chr3L 20462626 intron atk - chr3L 20462682 intron atk - chr3L_8_20460001 chr3L_20460001 RAL-531 1534 chr3L 20476736 20476745 chr3L 20484355 20484364 springer 5 7619 10.0 3.0 6.5 0.7 7628 chr3L 20476736 3` UTR isoQC + chr3L 20480550 intergenic not near genes chr3L 20484364 3` UTR ZnT77C - chr3L_5_20480001 chr3L_20480001 RAL-531 1535 chr3L 20476749 20476771 chr3L 20484351 20484390 springer 12 7615 7.5 3.0 5.2 1.9 7641 chr3L 20476749 3` UTR isoQC + chr3L 20480570 intergenic not near genes chr3L 20484390 3` UTR ZnT77C - chr3L_12_20480001 chr3L_20480001 RAL-531 1536 chr3L 20525228 20525228 chr3L 22908066 22908066 4 2382838 15.0 25.0 20.0 0.2 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-531 1537 chr3L 20525229 20525229 chr3L 24821492 24821494 7 4296264 15.0 5.5 10.2 0.6 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_7_22670001 chr3L_22670001 RAL-531 1538 chr3L 20603276 20603323 chr3L 20603520 20603567 9 243 2.0 6.0 4.0 1.8 291 chr3L 20603276 intron knrl - chr3L 20603422 intron knrl - chr3L 20603567 intron knrl - chr3L_9_20600001 chr3L_20600001 RAL-531 1539 chr3L 20710739 20710787 chr3L 20710836 20710883 18 97 4.5 1.5 3.0 4.5 144 chr3L 20710739 intergenic not near genes chr3L 20710811 intergenic not near genes chr3L 20710883 intergenic not near genes chr3L_18_20710001 chr3L_20710001 RAL-531 1540 chr3L 20821273 20821311 chr3L 20824762 20824787 NOF 9 3486 3.0 5.0 4.0 1.8 3514 chr3L 20821273 intron Pka-R1 + chr3L 20823030 intron Pka-R1 + chr3L 20824787 intron Pka-R1 + chr3L_9_20820001 chr3L_20820001 RAL-531 1541 chr3L 20825864 20825878 chr3L 20827670 20827695 5 1814 1.0 7.5 4.2 1.0 1831 chr3L 20825864 intron Pka-R1 + chr3L 20826780 intron Pka-R1 + chr3L 20827695 intron Pka-R1 + chr3L_5_20825001 chr3L_20825001 RAL-531 1542 chr3L 20849250 20849301 chr3L 20849349 20849400 14 99 3.5 4.0 3.8 2.9 150 chr3L 20849250 intron CG32432 - chr3L 20849325 intron CG32432 - chr3L 20849400 intron CG32432 - chr3L_14_20845001 chr3L_20845001 RAL-531 1543 chr3L 20858060 20858105 chr3L 20858179 20858224 17 119 3.5 8.5 6.0 2.4 164 chr3L 20858060 intron CG32432 - chr3L 20858142 intron CG32432 - chr3L 20858224 intron CG32432 - chr3L_17_20855001 chr3L_20855001 RAL-531 1544 chr3L 21014924 21014945 chr3L 21023406 21023412 Tirant 4 8472 1.5 3.5 2.5 1.1 8488 chr3L 21014924 intron skd - chr3L 21019168 intron skd - chr3L 21023412 intron skd - chr3L_4_21015001 chr3L_21015001 RAL-531 1545 chr3L 21065475 21065509 chr3L 21065573 21065617 10 106 1.5 4.5 3.0 2.5 142 chr3L 21065475 intron siz + chr3L 21065546 intron siz + chr3L 21065617 intron siz + chr3L_10_21065001 chr3L_21065001 RAL-531 1546 chr3L 21071297 21071342 chr3L 21071477 21071525 16 182 11.5 7.0 9.2 1.6 228 chr3L 21071297 intron siz + chr3L 21071411 intron siz + chr3L 21071525 intron siz + chr3L_16_21070001 chr3L_21070001 RAL-531 1547 chr3L 21082189 21082241 chr3L 21082287 21082338 15 98 3.0 4.0 3.5 3.3 149 chr3L 21082189 intron ko - chr3L 21082264 intron ko - chr3L 21082338 intron ko - chr3L_15_21080001 chr3L_21080001 RAL-531 1548 chr3L 21124887 21124922 chr3L 21124987 21125022 14 99 7.5 3.5 5.5 2.2 135 chr3L 21124887 intron ko - chr3L 21124954 intron ko - chr3L 21125022 intron ko - chr3L_14_21120001 chr3L_21120001 RAL-531 1549 chr3L 21151845 21151892 chr3L 21156949 21156996 flea 24 5104 3.0 6.0 4.5 4.4 5151 chr3L 21151845 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21156996 intron Ac78C - chr3L_24_21150001 chr3L_21150001 RAL-531 1550 chr3L 21301715 21301759 chr3L 21301816 21301865 14 100 3.0 1.5 2.2 4.4 150 chr3L 21301715 5` UTR CR45432 + chr3L 21301790 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301865 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_14_21300001 chr3L_21300001 RAL-531 1551 chr3L 21306132 21306179 chr3L 21315307 21315358 roo 18 9177 4.5 2.5 3.5 4.0 9226 chr3L 21306132 3` UTR CG7632 + chr3L 21310745 intron Pc - chr3L 21315358 3` UTR Pc - chr3L_18_21310001 chr3L_21310001 RAL-531 1552 chr3L 21319509 21319559 chr3L 21319619 21319665 9 108 3.5 4.0 3.8 1.9 156 chr3L 21319509 5` UTR Rab26 + chr3L 21319587 5` UTR Rab26 + chr3L 21319665 5` UTR Rab26 + chr3L_9_21315001 chr3L_21315001 RAL-531 1553 chr3L 21361708 21361747 chr3L 21362682 21362721 G2 7 972 3.0 5.0 4.0 1.4 1013 chr3L 21361708 intergenic CG32440 + chr3L 21362214 intergenic not near genes chr3L 21362721 intergenic not near genes chr3L_7_21360001 chr3L_21360001 RAL-531 1554 chr3L 21362831 21362872 chr3L 21362935 21362976 12 104 6.5 0.0 3.2 2.9 145 chr3L 21362831 intergenic not near genes chr3L 21362904 intergenic not near genes chr3L 21362976 intergenic not near genes chr3L_12_21360001 chr3L_21360001 RAL-531 1555 chr3L 21372701 21372753 chr3L 21379229 21379280 McClintock 12 6528 6.5 3.5 5.0 2.0 6579 chr3L 21372701 intergenic not near genes chr3L 21375990 intergenic not near genes chr3L 21379280 intergenic not near genes chr3L_12_21375001 chr3L_21375001 RAL-531 1556 chr3L 21395153 21395164 chr3L 21395228 21395272 6 98 4.5 6.0 5.2 1.0 119 chr3L 21395153 intron rgn + chr3L 21395212 intron rgn + chr3L 21395272 intron rgn + chr3L_6_21395001 chr3L_21395001 RAL-531 1557 chr3L 21406990 21407025 chr3L 21407074 21407120 5 90 3.0 2.5 2.8 1.3 130 chr3L 21406990 intron rgn + chr3L 21407055 intron rgn + chr3L 21407120 intron rgn + chr3L_5_21405001 chr3L_21405001 RAL-531 1558 chr3L 21412733 21412744 chr3L 21412829 21412829 4 94 5.5 3.0 4.2 0.8 96 chr3L 21412733 intron rgn + chr3L 21412781 intron rgn + chr3L 21412829 intron rgn + chr3L_4_21410001 chr3L_21410001 RAL-531 1559 chr3L 21412750 21412781 chr3L 21412821 21412866 7 75 3.0 3.5 3.2 1.7 116 chr3L 21412750 intron rgn + chr3L 21412808 intron rgn + chr3L 21412866 intron rgn + chr3L_7_21410001 chr3L_21410001 RAL-531 1560 chr3L 7201270 7201270 chr3L 21448026 21448026 4 14246756 5.0 14.0 9.5 0.4 14246756 chr3L 7201270 intergenic not near genes chr3L 14324648 intron,intron fz +,CR45025 - chr3L 21448026 3` UTR Syx7 + chr3L_4_14320001 chr3L_14320001 RAL-531 1561 chr3L 16736388 16736393 chr3L 21448026 21448026 5 4711636 3.0 14.0 8.5 0.5 4711638 chr3L 16736388 intron CG9701 + chr3L 19092207 intergenic MESR6 + chr3L 21448026 3` UTR Syx7 + chr3L_5_19090001 chr3L_19090001 RAL-531 1562 chr3L 21604106 21604155 chr3L 21604228 21604276 19 122 3.5 5.0 4.2 3.7 170 chr3L 21604106 intron TfAP-2 + chr3L 21604191 intron TfAP-2 + chr3L 21604276 intron TfAP-2 + chr3L_19_21600001 chr3L_21600001 RAL-531 1563 chr3L 21639182 21639222 chr3L 21639280 21639321 10 96 3.0 3.5 3.2 2.4 139 chr3L 21639182 intergenic CG32444 +,CG32445 + chr3L 21639252 intergenic CG32445 +,CG32444 + chr3L 21639321 intergenic CG32445 +,CG32444 + chr3L_10_21635001 chr3L_21635001 RAL-531 1564 chr3L 21656998 21657027 chr3L 21657095 21657130 5 104 5.0 4.0 4.5 0.9 132 chr3L 21656998 intron CG43980 + chr3L 21657064 intron CG43980 + chr3L 21657130 intron CG43980 + chr3L_5_21655001 chr3L_21655001 RAL-531 1565 chr3L 21738600 21738649 chr3L 21738712 21738761 16 112 3.5 4.5 4.0 3.2 161 chr3L 21738600 intergenic CG14567 - chr3L 21738680 intergenic CG14567 - chr3L 21738761 intergenic CG14567 - chr3L_16_21735001 chr3L_21735001 RAL-531 1566 chr3L 21776673 21776687 chr3L 21776780 21776794 6 107 0.0 2.0 1.0 3.0 121 chr3L 21776673 intron,intron CG42689 +,CG42552 + chr3L 21776734 intron,intron CG42689 +,CG42552 + chr3L 21776794 intron,intron CG42689 +,CG42552 + chr3L_6_21775001 chr3L_21775001 RAL-531 1567 chr3L 21785749 21785793 chr3L 21786092 21786136 10 341 5.0 2.0 3.5 2.2 387 chr3L 21785749 intergenic not near genes chr3L 21785942 intergenic not near genes chr3L 21786136 intergenic not near genes chr3L_10_21785001 chr3L_21785001 RAL-531 1568 chr3L 21852260 21852279 chr3L 21852349 21852370 8 97 4.0 1.0 2.5 2.3 110 chr3L 21852260 intron mub + chr3L 21852315 intron mub + chr3L 21852370 intron mub + chr3L_8_21850001 chr3L_21850001 RAL-531 1569 chr3L 21970786 21970836 chr3L 21970895 21970929 11 106 4.0 1.0 2.5 3.1 143 chr3L 21970786 intergenic not near genes chr3L 21970858 intergenic not near genes chr3L 21970929 intergenic not near genes chr3L_11_21970001 chr3L_21970001 RAL-531 1570 chr3L 22023196 22023247 chr3L 22023308 22023344 11 103 1.0 1.5 1.2 5.0 148 chr3L 22023196 intergenic not near genes chr3L 22023270 intergenic not near genes chr3L 22023344 intergenic not near genes chr3L_11_22020001 chr3L_22020001 RAL-531 1571 chr3L 22099662 22099704 chr3L 22105868 22105910 3S18 12 6205 2.5 2.5 2.5 3.4 6248 chr3L 22099662 intergenic not near genes chr3L 22102786 intergenic not near genes chr3L 22105910 intergenic not near genes chr3L_12_22100001 chr3L_22100001 RAL-531 1572 chr3L 22124802 22124836 chr3L 22124905 22124939 8 103 1.5 5.5 3.5 1.8 137 chr3L 22124802 intergenic not near genes chr3L 22124870 intergenic not near genes chr3L 22124939 intergenic not near genes chr3L_8_22120001 chr3L_22120001 RAL-531 1573 chr3L 22130484 22130521 chr3L 22130650 22130687 10 166 2.5 2.0 2.2 3.1 203 chr3L 22130484 intergenic not near genes chr3L 22130586 intergenic not near genes chr3L 22130687 intergenic not near genes chr3L_10_22130001 chr3L_22130001 RAL-531 1574 chr3L 22166432 22166474 chr3L 22166525 22166534 7 90 1.5 1.5 1.5 2.8 102 chr3L 22166432 intron olf413 + chr3L 22166483 intron olf413 + chr3L 22166534 intron olf413 + chr3L_7_22165001 chr3L_22165001 RAL-531 1575 chr3L 22447176 22447229 chr3L 22447287 22447329 16 110 2.0 6.5 4.2 3.1 153 chr3L 22447176 intergenic not near genes chr3L 22447252 intergenic not near genes chr3L 22447329 intergenic not near genes chr3L_16_22445001 chr3L_22445001 RAL-531 1576 chr3L 22471579 22471617 chr3L 22471676 22471710 4 92 4.5 4.5 4.5 0.7 131 chr3L 22471579 intron CG11426 + chr3L 22471644 intron CG11426 + chr3L 22471710 intron CG11426 + chr3L_4_22470001 chr3L_22470001 RAL-531 1577 chr3L 22520451 22520473 chr3L 22520731 22520770 8 289 3.0 1.5 2.2 2.5 319 chr3L 22520451 intergenic not near genes chr3L 22520610 intergenic not near genes chr3L 22520770 intergenic not near genes chr3L_8_22520001 chr3L_22520001 RAL-531 1578 chr3L 22531918 22531951 chr3L 22532250 22532283 16 330 6.5 2.0 4.2 3.1 365 chr3L 22531918 intergenic not near genes chr3L 22532100 intergenic not near genes chr3L 22532283 intergenic not near genes chr3L_16_22530001 chr3L_22530001 RAL-531 1579 chr3L 22545650 22545680 chr3L 22545849 22545876 7 190 2.0 4.0 3.0 1.8 226 chr3L 22545650 intergenic not near genes chr3L 22545763 intergenic not near genes chr3L 22545876 intergenic not near genes chr3L_7_22545001 chr3L_22545001 RAL-531 1580 chr3L 22555753 22555773 chr3L 22563242 22563260 blood 5 7487 10.0 0.5 5.2 0.8 7507 chr3L 22555753 intergenic not near genes chr3L 22559506 intergenic not near genes chr3L 22563260 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-531 1581 chr3L 22555780 22555803 chr3L 22563241 22563244 blood 7 7477 4.5 0.0 2.2 2.2 7464 chr3L 22555780 intergenic not near genes chr3L 22559512 intergenic not near genes chr3L 22563244 intergenic not near genes chr3L_7_22555001 chr3L_22555001 RAL-531 1582 chr3L 22617178 22617223 chr3L 22624644 22624695 blood 12 7468 1.5 3.0 2.2 3.8 7517 chr3L 22617178 intron CG14459 - chr3L 22620936 intron CG14459 - chr3L 22624695 intron CG14459 - chr3L_12_22620001 chr3L_22620001 RAL-531 1583 chr3L 22644816 22644868 chr3L 22645063 22645116 22 247 4.0 4.5 4.2 4.2 300 chr3L 22644816 intergenic CR45381 + chr3L 22644966 intergenic CR45381 + chr3L 22645116 intergenic not near genes chr3L_22_22640001 chr3L_22640001 RAL-531 1584 chr3L 22684158 22684210 chr3L 22684355 22684397 15 193 2.0 4.0 3.0 3.8 239 chr3L 22684158 intergenic not near genes chr3L 22684278 intergenic not near genes chr3L 22684397 intergenic not near genes chr3L_15_22680001 chr3L_22680001 RAL-531 1585 chr3L 22761368 22761420 chr3L 22766822 22766867 Ivk 12 5452 4.0 3.0 3.5 2.7 5499 chr3L 22761368 intron SPoCk + chr3L 22764118 intron SPoCk + chr3L 22766867 intron SPoCk + chr3L_12_22760001 chr3L_22760001 RAL-531 1586 chr3L 22825533 22825556 chr3L 22825630 22825653 9 96 6.0 7.5 6.8 1.2 120 chr3L 22825533 intron jim - chr3L 22825593 intron jim - chr3L 22825653 intron jim - chr3L_9_22825001 chr3L_22825001 RAL-531 1587 chr3L 22849437 22849443 chr3L 22849542 22849548 4 105 4.0 15.5 9.8 0.4 111 chr3L 22849437 intergenic not near genes chr3L 22849492 intergenic not near genes chr3L 22849548 intergenic not near genes chr3L_4_22845001 chr3L_22845001 RAL-531 1588 chr3L 22865960 22866009 chr3L 22867113 22867162 Doc 15 1152 3.0 7.0 5.0 2.5 1202 chr3L 22865960 exon CG33170 + chr3L 22866561 intron CG33170 + chr3L 22867162 intron CG33170 + chr3L_15_22865001 chr3L_22865001 RAL-531 1589 chr3L 19220633 19220636 chr3L 22908066 22908066 4 3687432 15.0 25.0 20.0 0.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-531 1590 chr3L 20525228 20525229 chr3L 22908066 22908066 6 2382838 15.0 25.0 20.0 0.3 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-531 1591 chr3L 22908067 22908067 chr3L 24821492 24821496 7 1913427 23.0 5.5 14.2 0.5 1913429 chr3L 22908067 intergenic not near genes chr3L 23864782 intron CG40470 - chr3L 24821496 intergenic not near genes chr3L_7_23860001 chr3L_23860001 RAL-531 1592 chr3L 22974379 22974394 chr3L 22974453 22974463 5 84 2.5 4.0 3.2 1.2 84 chr3L 22974379 intergenic not near genes chr3L 22974421 intergenic not near genes chr3L 22974463 intergenic not near genes chr3L_5_22970001 chr3L_22970001 RAL-531 1593 chr3L 22985888 22985921 chr3L 22985988 22986022 6 98 1.5 2.0 1.8 2.1 134 chr3L 22985888 intergenic not near genes chr3L 22985955 intergenic not near genes chr3L 22986022 intergenic not near genes chr3L_6_22985001 chr3L_22985001 RAL-531 1594 chr3L 22989844 22989892 chr3L 22996838 22996886 297 10 6990 2.5 2.5 2.5 2.9 7042 chr3L 22989844 intergenic not near genes chr3L 22993365 intergenic not near genes chr3L 22996886 intergenic not near genes chr3L_10_22990001 chr3L_22990001 RAL-531 1595 chr3L 23018500 23018539 chr3L 23018785 23018824 14 284 2.5 4.0 3.2 3.3 324 chr3L 23018500 intron nrm + chr3L 23018662 intron nrm + chr3L 23018824 intron nrm + chr3L_14_23015001 chr3L_23015001 RAL-531 1596 chr3L 23026435 23026485 chr3L 23026571 23026595 15 129 2.0 4.0 3.0 3.8 160 chr3L 23026435 intron nrm + chr3L 23026515 intron nrm + chr3L 23026595 intron nrm + chr3L_15_23025001 chr3L_23025001 RAL-531 1597 chr3L 23042226 23042258 chr3L 23048978 23049000 gypsy6 4 6755 3.5 0.5 2.0 1.3 6774 chr3L 23042226 intergenic not near genes chr3L 23045613 intergenic not near genes chr3L 23049000 intergenic not near genes chr3L_4_23045001 chr3L_23045001 RAL-531 1598 chr3L 23182798 23182853 chr3L 23182893 23182949 9 91 2.5 2.5 2.5 2.6 151 chr3L 23182798 intron CG34031 + chr3L 23182874 intron CG34031 + chr3L 23182949 intron CG34031 + chr3L_9_23180001 chr3L_23180001 RAL-531 1599 chr3L 23204683 23204732 chr3L 23204791 23204840 9 101 2.0 3.0 2.5 2.6 157 chr3L 23204683 intergenic not near genes chr3L 23204762 intergenic not near genes chr3L 23204840 intergenic not near genes chr3L_9_23200001 chr3L_23200001 RAL-531 1600 chr3L 23251931 23251973 chr3L 23252065 23252080 11 132 2.0 5.0 3.5 2.4 149 chr3L 23251931 intron nAChRalpha4 + chr3L 23252006 intron nAChRalpha4 + chr3L 23252080 intron nAChRalpha4 + chr3L_11_23250001 chr3L_23250001 RAL-531 1601 chr3L 23253325 23253366 chr3L 23253423 23253462 12 99 3.0 4.0 3.5 2.7 137 chr3L 23253325 intron nAChRalpha4 + chr3L 23253394 intron nAChRalpha4 + chr3L 23253462 intron nAChRalpha4 + chr3L_12_23250001 chr3L_23250001 RAL-531 1602 chr3L 23428224 23428251 chr3L 23428324 23428327 5 95 3.5 2.0 2.8 1.3 103 chr3L 23428224 intergenic not near genes chr3L 23428276 intergenic not near genes chr3L 23428327 intergenic not near genes chr3L_5_23425001 chr3L_23425001 RAL-531 1603 chr3L 23428253 23428269 chr3L 23428320 23428324 5 78 2.0 2.0 2.0 1.7 71 chr3L 23428253 intergenic not near genes chr3L 23428288 intergenic not near genes chr3L 23428324 intergenic not near genes chr3L_5_23425001 chr3L_23425001 RAL-531 1604 chr3L 23468013 23468044 chr3L 23468114 23468149 6 103 22.0 21.0 21.5 0.3 136 chr3L 23468013 intergenic not near genes chr3L 23468081 intergenic not near genes chr3L 23468149 intergenic not near genes chr3L_6_23465001 chr3L_23465001 RAL-531 1605 chr3L 23485842 23485890 chr3L 23485940 23485988 7 93 0.5 1.5 1.0 3.5 146 chr3L 23485842 intergenic not near genes chr3L 23485915 intergenic not near genes chr3L 23485988 intergenic not near genes chr3L_7_23485001 chr3L_23485001 RAL-531 1606 chr3L 23665516 23665529 chr3L 23665626 23665639 gypsy8 5 110 19.0 14.5 16.8 0.3 123 chr3L 23665516 intron AGO3 + chr3L 23665578 intron AGO3 + chr3L 23665639 intron AGO3 + chr3L_5_23665001 chr3L_23665001 RAL-531 1607 chr3L 21145711 21145723 chr3L 23747151 23747153 4 2601434 4.5 16.5 10.5 0.3 2601442 chr3L 21145711 intron Ac78C - chr3L 22446432 intergenic not near genes chr3L 23747153 intron CG17698 + chr3L_4_22445001 chr3L_22445001 RAL-531 1608 chr3L 23824005 23824047 chr3L 23824438 23824454 7 428 3.5 4.0 3.8 1.5 449 chr3L 23824005 intergenic not near genes chr3L 23824230 intergenic not near genes chr3L 23824454 intergenic not near genes chr3L_7_23820001 chr3L_23820001 RAL-531 1609 chr3L 23913427 23913474 chr3L 23913538 23913582 15 109 4.5 5.5 5.0 2.5 155 chr3L 23913427 intron CG40470 - chr3L 23913504 intron CG40470 - chr3L 23913582 intron CG40470 - chr3L_15_23910001 chr3L_23910001 RAL-531 1610 chr3L 24009650 24009699 chr3L 24009852 24009889 9 200 3.0 2.5 2.8 2.4 239 chr3L 24009650 intergenic CR40053 - chr3L 24009770 intergenic CR40053 - chr3L 24009889 intergenic CR40053 - chr3L_9_24005001 chr3L_24005001 RAL-531 1611 chr3L 24012403 24012438 chr3L 24020762 24020778 roo 6 8353 3.0 5.0 4.0 1.2 8375 chr3L 24012403 intergenic not near genes chr3L 24016590 intergenic not near genes chr3L 24020778 intergenic not near genes chr3L_6_24015001 chr3L_24015001 RAL-531 1612 chr3L 24021303 24021314 chr3L 24022433 24022491 1360 6 1158 2.0 2.5 2.2 1.9 1188 chr3L 24021303 intergenic not near genes chr3L 24021897 intergenic not near genes chr3L 24022491 intergenic not near genes chr3L_6_24020001 chr3L_24020001 RAL-531 1613 chr3L 24791879 24791915 chr3L 24796678 24796714 Doc 9 4798 6.0 3.0 4.5 1.6 4835 chr3L 24791879 intergenic not near genes chr3L 24794296 intergenic not near genes chr3L 24796714 intergenic not near genes chr3L_9_24790001 chr3L_24790001 RAL-531 1614 chr3L 20525229 20525229 chr3L 24821492 24821492 4 4296263 15.0 5.5 10.2 0.4 4296263 chr3L 20525229 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-531 1615 chr3L 20525228 20525230 chr3L 24821493 24821493 5 4296264 15.0 5.5 10.2 0.4 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-531 1616 chr3L 20525228 20525229 chr3L 24821494 24821494 4 4296266 15.0 5.5 10.2 0.4 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-531 1617 chr3L 25464023 25464091 chr3L 25464108 25464188 4 90 1.0 1.0 1.0 2.0 165 chr3L 25464023 intergenic not near genes chr3L 25464106 intergenic not near genes chr3L 25464188 intergenic not near genes chr3L_4_25460001 chr3L_25460001 RAL-531 1618 chr3L 25513558 25513604 chr3L 25513657 25513669 10 91 5.0 1.5 3.2 2.4 111 chr3L 25513558 intron CG41343 - chr3L 25513614 intron CG41343 - chr3L 25513669 intron CG41343 - chr3L_10_25510001 chr3L_25510001 RAL-531 1619 chr3L 25628501 25628526 chr3L 25633270 25633317 F-element 8 4782 2.0 4.0 3.0 2.0 4816 chr3L 25628501 intron CG41343 - chr3L 25630909 intron CG41343 - chr3L 25633317 intron CG41343 - chr3L_8_25630001 chr3L_25630001 RAL-531 1620 chr3L 25709251 25709269 chr3L 25709405 25709424 6 152 3.0 1.0 2.0 2.0 173 chr3L 25709251 5` UTR CR45180 + chr3L 25709338 intergenic CR45180 + chr3L 25709424 intergenic CR45180 + chr3L_6_25705001 chr3L_25705001 RAL-531 1621 chr3L 26009405 26009454 chr3L 26009516 26009527 17 98 1.5 3.0 2.2 5.3 122 chr3L 26009405 intron CG40178 - chr3L 26009466 intron CG40178 - chr3L 26009527 intron CG40178 - chr3L_17_26005001 chr3L_26005001 RAL-531 1622 chr3L 26694918 26694952 chr3L 26695011 26695052 8 95 2.0 0.5 1.2 3.6 134 chr3L 26694918 intergenic not near genes chr3L 26694985 intergenic not near genes chr3L 26695052 intergenic not near genes chr3L_8_26690001 chr3L_26690001 RAL-531 1623 chr3L 27356103 27356113 chr3L 27357315 27357332 1360 7 1217 5.5 3.5 4.5 1.3 1229 chr3L 27356103 intron Dbp80 + chr3L 27356718 intron Dbp80 + chr3L 27357332 intron Dbp80 + chr3L_7_27355001 chr3L_27355001 RAL-531 1624 chr3L 27368872 27368898 chr3L 27369437 27369463 7 563 8.0 6.5 7.2 0.9 591 chr3L 27368872 intron Dbp80 + chr3L 27369168 intron Dbp80 + chr3L 27369463 intron Dbp80 + chr3L_7_27365001 chr3L_27365001 RAL-531 1625 chr3L 27390684 27390711 chr3L 27390780 27390800 7 93 28.0 41.0 34.5 0.2 116 chr3L 27390684 intron Dbp80 + chr3L 27390742 intron Dbp80 + chr3L 27390800 intron Dbp80 + chr3L_7_27390001 chr3L_27390001 RAL-531 1626 chr3L 27980676 27980730 chr3L 27985494 27985548 Doc 10 4816 0.5 3.0 1.8 3.6 4872 chr3L 27980676 intron CG17514 - chr3L 27983112 intron CG17514 - chr3L 27985548 intron CG17514 - chr3L_10_27980001 chr3L_27980001 RAL-531 1627 chr3R 97110 97113 chr3R 99846 99849 8 2736 13.5 19.5 16.5 0.5 2739 chr3R 97110 intergenic not near genes chr3R 98480 intergenic not near genes chr3R 99849 intergenic not near genes chr3R_8_95001 chr3R_95001 RAL-531 1628 chr3R 1021771 1021802 chr3R 1022005 1022036 7 237 24.5 21.5 23.0 0.3 265 chr3R 1021771 intergenic not near genes chr3R 1021904 intergenic not near genes chr3R 1022036 intergenic not near genes chr3R_7_1020001 chr3R_1020001 RAL-531 1629 chr3R 1062376 1062400 chr3R 1062554 1062578 5 176 4.5 5.0 4.8 0.9 202 chr3R 1062376 intron CG15831 + chr3R 1062477 intron CG15831 + chr3R 1062578 intron CG15831 + chr3R_5_1060001 chr3R_1060001 RAL-531 1630 chr3R 1207425 1207428 chr3R 1345620 1345623 17.6 4 138194 10.5 16.5 13.5 0.3 138198 chr3R 1207425 intergenic not near genes chr3R 1276524 intergenic not near genes chr3R 1345623 intron CG40155 + chr3R_4_1275001 chr3R_1275001 RAL-531 1631 chr3R 1939042 1939079 chr3R 1939156 1939193 5 113 3.5 4.0 3.8 1.0 151 chr3R 1939042 intergenic not near genes chr3R 1939118 intergenic not near genes chr3R 1939193 intergenic not near genes chr3R_5_1935001 chr3R_1935001 RAL-531 1632 chr3R 2534122 2534156 chr3R 2541710 2541745 6 7585 5.5 8.5 7.0 0.8 7623 chr3R 2534122 intergenic not near genes chr3R 2537934 intergenic not near genes chr3R 2541745 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-531 1633 chr3R 3267248 3267248 chr3R 3267419 3267456 5 175 18.0 12.0 15.0 0.3 208 chr3R 3267248 intergenic not near genes chr3R 3267352 intergenic not near genes chr3R 3267456 intergenic not near genes chr3R_5_3265001 chr3R_3265001 RAL-531 1634 chr3R 3752751 3752761 chr3R 3752822 3752864 6 91 1.0 4.5 2.8 1.6 113 chr3R 3752751 intergenic CG41128 + chr3R 3752808 intergenic CG41128 + chr3R 3752864 intergenic not near genes chr3R_6_3750001 chr3R_3750001 RAL-531 1635 chr3R 3916188 3916209 chr3R 3916315 3916336 4 127 28.5 21.5 25.0 0.2 148 chr3R 3916188 intergenic not near genes chr3R 3916262 intergenic not near genes chr3R 3916336 intergenic not near genes chr3R_4_3915001 chr3R_3915001 RAL-531 1636 chr3R 4105021 4105056 chr3R 4110245 4110280 copia 6 5224 11.5 4.5 8.0 0.7 5259 chr3R 4105021 intergenic not near genes chr3R 4107650 intergenic not near genes chr3R 4110280 intergenic not near genes chr3R_6_4105001 chr3R_4105001 RAL-531 1637 chr3R 4132884 4132920 chr3R 4133058 4133094 8 174 3.5 3.5 3.5 1.8 210 chr3R 4132884 5` UTR Gfat1 + chr3R 4132989 intron Gfat1 + chr3R 4133094 intron Gfat1 + chr3R_8_4130001 chr3R_4130001 RAL-531 1638 chr3R 4206051 4206103 chr3R 4211646 4211698 mdg3 18 5593 6.0 7.0 6.5 2.4 5647 chr3R 4206051 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211698 intron CG14636 - chr3R_18_4205001 chr3R_4205001 RAL-531 1639 chr3R 4298123 4298130 chr3R 4298219 4298228 4 98 4.5 14.5 9.5 0.4 105 chr3R 4298123 3` UTR cpx + chr3R 4298176 3` UTR cpx + chr3R 4298228 3` UTR cpx + chr3R_4_4295001 chr3R_4295001 RAL-531 1640 chr3R 4366743 4366748 chr3R 4375146 4375150 roo 4 8402 14.5 6.0 10.2 0.4 8407 chr3R 4366743 3` UTR CG1090 + chr3R 4370946 intergenic not near genes chr3R 4375150 5` UTR CR44922 + chr3R_4_4370001 chr3R_4370001 RAL-531 1641 chr3R 4366755 4366787 chr3R 4375141 4375190 roo 15 8398 5.0 4.5 4.8 2.6 8435 chr3R 4366755 3` UTR CG1090 + chr3R 4370972 intergenic not near genes chr3R 4375190 5` UTR CR44922 + chr3R_15_4370001 chr3R_4370001 RAL-531 1642 chr3R 4408395 4408439 chr3R 4412719 4412762 Juan 12 4323 6.5 9.5 8.0 1.3 4367 chr3R 4408395 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412762 intron CG32944 - chr3R_12_4410001 chr3R_4410001 RAL-531 1643 chr3R 4474669 4474714 chr3R 4474770 4474815 15 100 7.0 2.5 4.8 2.6 146 chr3R 4474669 intron CG31523 - chr3R 4474742 intron CG31523 - chr3R 4474815 intron CG31523 - chr3R_15_4470001 chr3R_4470001 RAL-531 1644 chr3R 4512379 4512388 chr3R 4512610 4512619 5 231 12.0 0.0 6.0 0.7 240 chr3R 4512379 intron CG34357 - chr3R 4512499 intron CG34357 - chr3R 4512619 intron CG34357 - chr3R_5_4510001 chr3R_4510001 RAL-531 1645 chr3R 4609527 4609570 chr3R 4610710 4610754 1360 12 1183 6.5 5.0 5.8 1.8 1227 chr3R 4609527 intergenic not near genes chr3R 4610140 intergenic not near genes chr3R 4610754 intergenic not near genes chr3R_12_4610001 chr3R_4610001 RAL-531 1646 chr3R 4625307 4625338 chr3R 4625702 4625741 9 391 4.0 3.5 3.8 1.9 434 chr3R 4625307 intron 5-HT2A + chr3R 4625524 intron 5-HT2A + chr3R 4625741 intron 5-HT2A + chr3R_9_4625001 chr3R_4625001 RAL-531 1647 chr3R 4657264 4657267 chr3R 4657583 4657591 4 323 2.5 7.0 4.8 0.7 327 chr3R 4657264 intron spartin + chr3R 4657428 intron spartin + chr3R 4657591 exon spartin + chr3R_4_4655001 chr3R_4655001 RAL-531 1648 chr3R 4729120 4729174 chr3R 4729415 4729428 14 284 2.5 8.5 5.5 2.2 308 chr3R 4729120 intron Nep2 - chr3R 4729274 intron Nep2 - chr3R 4729428 intron Nep2 - chr3R_14_4725001 chr3R_4725001 RAL-531 1649 chr3R 4745045 4745095 chr3R 4745209 4745240 8 150 1.5 1.5 1.5 3.2 195 chr3R 4745045 intron tacc - chr3R 4745142 intron tacc - chr3R 4745240 intron tacc - chr3R_8_4745001 chr3R_4745001 RAL-531 1650 chr3R 4753220 4753272 chr3R 4757543 4757583 F-element 11 4318 2.0 3.0 2.5 3.1 4363 chr3R 4753220 intron,intron atms +,CG44098 - chr3R 4755402 intron,intron atms +,CG44098 - chr3R 4757583 intron,exon atms +,CG44098 - chr3R_11_4755001 chr3R_4755001 RAL-531 1651 chr3R 4759702 4759736 chr3R 4761219 4761253 hopper2 6 1515 3.0 6.5 4.8 1.0 1551 chr3R 4759702 intron,intron atms +,CG44098 - chr3R 4760478 intron,intron atms +,CG44098 - chr3R 4761253 intron,intron atms +,CG44098 - chr3R_6_4760001 chr3R_4760001 RAL-531 1652 chr3R 4769144 4769184 chr3R 4769242 4769282 12 96 2.5 5.0 3.8 2.5 138 chr3R 4769144 intron,intron atms +,CG44098 - chr3R 4769213 intron,intron atms +,CG44098 - chr3R 4769282 intron,intron atms +,CG44098 - chr3R_12_4765001 chr3R_4765001 RAL-531 1653 chr3R 4808079 4808102 chr3R 4808183 4808206 4 104 5.0 10.0 7.5 0.5 127 chr3R 4808079 intron ctrip - chr3R 4808142 intron ctrip - chr3R 4808206 intron ctrip - chr3R_4_4805001 chr3R_4805001 RAL-531 1654 chr3R 4896278 4896321 chr3R 4896391 4896409 15 110 4.0 4.0 4.0 3.0 131 chr3R 4896278 intergenic CR45580 + chr3R 4896344 intergenic CR45580 + chr3R 4896409 intergenic CR45580 + chr3R_15_4895001 chr3R_4895001 RAL-531 1655 chr3R 4948364 4948379 chr3R 4949003 4949014 6 640 39.5 16.5 28.0 0.2 650 chr3R 4948364 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948689 intergenic UbcD6 - chr3R 4949014 3` UTR UbcD6 - chr3R_6_4945001 chr3R_4945001 RAL-531 1656 chr3R 4948383 4948392 chr3R 4949001 4949034 7 638 36.0 16.5 26.2 0.3 651 chr3R 4948383 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948708 intergenic UbcD6 - chr3R 4949034 3` UTR UbcD6 - chr3R_7_4945001 chr3R_4945001 RAL-531 1657 chr3R 5045830 5045870 chr3R 5052952 5052992 HMS-Beagle 10 7122 4.5 4.0 4.2 1.9 7162 chr3R 5045830 intron CR43635 - chr3R 5049411 intergenic not near genes chr3R 5052992 intergenic CR45588 - chr3R_10_5045001 chr3R_5045001 RAL-531 1658 chr3R 5067963 5068014 chr3R 5073498 5073550 mdg3 19 5537 4.0 6.0 5.0 3.2 5587 chr3R 5067963 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073550 intergenic not near genes chr3R_19_5070001 chr3R_5070001 RAL-531 1659 chr3R 5236206 5236243 chr3R 5236354 5236391 8 148 3.5 4.0 3.8 1.7 185 chr3R 5236206 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236298 3` UTR rtp - chr3R 5236391 3` UTR rtp - chr3R_8_5235001 chr3R_5235001 RAL-531 1660 chr3R 5250861 5250912 chr3R 5250992 5251041 10 130 2.5 5.0 3.8 2.1 180 chr3R 5250861 intron CG12163 - chr3R 5250951 intron CG12163 - chr3R 5251041 intron CG12163 - chr3R_10_5250001 chr3R_5250001 RAL-531 1661 chr3R 5278083 5278102 chr3R 5278184 5278202 6 99 3.5 7.5 5.5 0.9 119 chr3R 5278083 intron mtd - chr3R 5278142 intron mtd - chr3R 5278202 intron mtd - chr3R_6_5275001 chr3R_5275001 RAL-531 1662 chr3R 5278105 5278120 chr3R 5278168 5278217 6 80 3.0 6.0 4.5 1.1 112 chr3R 5278105 intron mtd - chr3R 5278161 intron mtd - chr3R 5278217 intron mtd - chr3R_6_5275001 chr3R_5275001 RAL-531 1663 chr3R 5338380 5338424 chr3R 5343577 5343608 Rt1c 14 5195 3.5 3.5 3.5 3.1 5228 chr3R 5338380 intron mtd - chr3R 5340994 intron mtd - chr3R 5343608 intron mtd - chr3R_14_5340001 chr3R_5340001 RAL-531 1664 chr3R 5368002 5368049 chr3R 5368114 5368126 13 98 2.5 3.5 3.0 3.2 124 chr3R 5368002 5` UTR Cerk - chr3R 5368064 5` UTR Cerk - chr3R 5368126 5` UTR Cerk - chr3R_13_5365001 chr3R_5365001 RAL-531 1665 chr3R 5445949 5445983 chr3R 5452428 5452462 Burdock 10 6478 6.0 4.0 5.0 1.7 6513 chr3R 5445949 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452462 intron CG14669 + chr3R_10_5445001 chr3R_5445001 RAL-531 1666 chr3R 5626411 5626435 chr3R 5626732 5626733 7 311 9.5 5.0 7.2 0.9 322 chr3R 5626411 intergenic RpL13A + chr3R 5626572 intergenic not near genes chr3R 5626733 intergenic not near genes chr3R_7_5625001 chr3R_5625001 RAL-531 1667 chr3R 5626437 5626459 chr3R 5626731 5626747 6 291 6.0 5.0 5.5 0.9 310 chr3R 5626437 intergenic RpL13A + chr3R 5626592 intergenic not near genes chr3R 5626747 intergenic not near genes chr3R_6_5625001 chr3R_5625001 RAL-531 1668 chr3R 5726079 5726126 chr3R 5726261 5726289 17 179 3.0 5.5 4.2 3.3 210 chr3R 5726079 intergenic not near genes chr3R 5726184 intergenic not near genes chr3R 5726289 intergenic not near genes chr3R_17_5725001 chr3R_5725001 RAL-531 1669 chr3R 5745999 5746040 chr3R 5746258 5746300 pogo 11 258 2.0 2.5 2.2 3.4 301 chr3R 5745999 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746300 3` UTR Madm + chr3R_11_5745001 chr3R_5745001 RAL-531 1670 chr3R 5746992 5747039 chr3R 5753203 5753250 diver 26 6209 5.5 7.5 6.5 3.5 6258 chr3R 5746992 intergenic Madm + chr3R 5750121 intergenic not near genes chr3R 5753250 intergenic CG2091 - chr3R_26_5750001 chr3R_5750001 RAL-531 1671 chr3R 5769214 5769257 chr3R 5769332 5769359 12 115 3.5 0.5 2.0 4.0 145 chr3R 5769214 intron CG2082 - chr3R 5769286 intron CG2082 - chr3R 5769359 intron CG2082 - chr3R_12_5765001 chr3R_5765001 RAL-531 1672 chr3R 5809093 5809143 chr3R 5809354 5809402 pogo 7 261 1.0 4.0 2.5 2.0 309 chr3R 5809093 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809402 3` UTR CG11000 + chr3R_7_5805001 chr3R_5805001 RAL-531 1673 chr3R 5822374 5822405 chr3R 5823546 5823586 1360 10 1182 3.0 3.0 3.0 2.5 1212 chr3R 5822374 3` UTR CG2023 - chr3R 5822980 3` UTR CG2023 - chr3R 5823586 3` UTR CG2023 - chr3R_10_5820001 chr3R_5820001 RAL-531 1674 chr3R 5846856 5846906 chr3R 5846952 5847002 24 95 4.0 7.0 5.5 3.7 146 chr3R 5846856 intergenic CG1213 +,CG14676 + chr3R 5846929 intergenic CG14676 +,CG1213 + chr3R 5847002 intergenic CG14676 +,CG1213 + chr3R_24_5845001 chr3R_5845001 RAL-531 1675 chr3R 5927547 5927577 chr3R 5927806 5927837 pogo 5 257 2.5 7.5 5.0 0.8 290 chr3R 5927547 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927837 intron CG34113 - chr3R_5_5925001 chr3R_5925001 RAL-531 1676 chr3R 5945895 5945938 chr3R 5946040 5946086 18 153 4.0 1.0 2.5 5.1 191 chr3R 5945895 intron CG34113 - chr3R 5945990 intron CG34113 - chr3R 5946086 intron CG34113 - chr3R_18_5945001 chr3R_5945001 RAL-531 1677 chr3R 6015572 6015576 chr3R 6015677 6015681 4 105 1.0 7.5 4.2 0.8 109 chr3R 6015572 intergenic not near genes chr3R 6015626 intergenic not near genes chr3R 6015681 intergenic not near genes chr3R_4_6015001 chr3R_6015001 RAL-531 1678 chr3R 6076507 6076549 chr3R 6076629 6076671 13 122 5.5 6.0 5.8 1.9 164 chr3R 6076507 intergenic Or83c - chr3R 6076589 intergenic Or83c - chr3R 6076671 intergenic Or83c - chr3R_13_6075001 chr3R_6075001 RAL-531 1679 chr3R 6175161 6175193 chr3R 6182453 6182470 HMS-Beagle2 7 7288 3.0 4.5 3.8 1.5 7309 chr3R 6175161 intergenic Osi1 + chr3R 6178816 intron CR45194 + chr3R 6182470 intergenic CR45194 + chr3R_7_6175001 chr3R_6175001 RAL-531 1680 chr3R 6191157 6191196 chr3R 6191250 6191296 9 96 3.5 5.5 4.5 1.6 139 chr3R 6191157 intron NPFR + chr3R 6191226 intron NPFR + chr3R 6191296 intron NPFR + chr3R_9_6190001 chr3R_6190001 RAL-531 1681 chr3R 6201748 6201784 chr3R 6201904 6201940 8 156 1.0 2.0 1.5 3.2 192 chr3R 6201748 intron Osi24 + chr3R 6201844 intron Osi24 + chr3R 6201940 intron Osi24 + chr3R_8_6200001 chr3R_6200001 RAL-531 1682 chr3R 6206307 6206313 chr3R 6206502 6206545 BS 6 217 1.0 5.0 3.0 1.5 238 chr3R 6206307 exon Osi24 + chr3R 6206426 intron Osi24 + chr3R 6206545 intron Osi24 + chr3R_6_6205001 chr3R_6205001 RAL-531 1683 chr3R 6308870 6308910 chr3R 6315491 6315518 8 6610 36.0 22.0 29.0 0.3 6648 chr3R 6308870 exon CG31556 - chr3R 6312194 intron Osi17 + chr3R 6315518 5` UTR Osi17 + chr3R_8_6310001 chr3R_6310001 RAL-531 1684 chr3R 6334781 6334811 chr3R 6334899 6334913 6 115 1.5 5.0 3.2 1.4 132 chr3R 6334781 intergenic not near genes chr3R 6334847 intergenic not near genes chr3R 6334913 intergenic Osi19 + chr3R_6_6330001 chr3R_6330001 RAL-531 1685 chr3R 6428789 6428824 chr3R 6428911 6428946 14 122 6.0 6.5 6.2 1.9 157 chr3R 6428789 intron gpp + chr3R 6428868 intron gpp + chr3R 6428946 intron gpp + chr3R_14_6425001 chr3R_6425001 RAL-531 1686 chr3R 6461556 6461612 chr3R 6461657 6461712 16 100 7.0 5.5 6.2 2.2 156 chr3R 6461556 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461712 intergenic not near genes chr3R_16_6460001 chr3R_6460001 RAL-531 1687 chr3R 6504074 6504118 chr3R 6504176 6504212 8 102 2.0 3.0 2.5 2.3 138 chr3R 6504074 intergenic not near genes chr3R 6504143 intergenic not near genes chr3R 6504212 intergenic not near genes chr3R_8_6500001 chr3R_6500001 RAL-531 1688 chr3R 6510008 6510040 chr3R 6515109 6515141 jockey 7 5101 7.5 7.5 7.5 0.8 5133 chr3R 6510008 intergenic not near genes chr3R 6512574 intergenic not near genes chr3R 6515141 intergenic not near genes chr3R_7_6510001 chr3R_6510001 RAL-531 1689 chr3R 6655744 6655795 chr3R 6656035 6656087 14 290 1.0 5.5 3.2 3.3 343 chr3R 6655744 exon Taf1 + chr3R 6655916 3` UTR Taf1 + chr3R 6656087 intergenic Taf1 +,CG1307 - chr3R_14_6655001 chr3R_6655001 RAL-531 1690 chr3R 6737504 6737529 chr3R 6739295 6739310 Doc 9 1802 1.0 4.0 2.5 2.6 1806 chr3R 6737504 intron pb - chr3R 6738407 intron pb - chr3R 6739310 intron pb - chr3R_9_6735001 chr3R_6735001 RAL-531 1691 chr3R 6828006 6828035 chr3R 6828102 6828131 11 96 4.5 3.0 3.8 2.3 125 chr3R 6828006 intron Scr - chr3R 6828068 intron Scr - chr3R 6828131 intron Scr - chr3R_11_6825001 chr3R_6825001 RAL-531 1692 chr3R 6862209 6862251 chr3R 6862316 6862358 14 107 1.5 9.5 5.5 2.2 149 chr3R 6862209 intergenic not near genes chr3R 6862284 intergenic not near genes chr3R 6862358 intergenic not near genes chr3R_14_6860001 chr3R_6860001 RAL-531 1693 chr3R 6891227 6891339 chr3R 6891313 6891556 13 145 1.0 1.0 1.0 6.5 329 chr3R 6891227 intergenic not near genes chr3R 6891392 intergenic not near genes chr3R 6891556 intergenic not near genes chr3R_13_6890001 chr3R_6890001 RAL-531 1694 chr3R 6914866 6914889 chr3R 6914947 6914965 4 78 2.0 3.5 2.8 1.1 99 chr3R 6914866 intron Antp - chr3R 6914916 intron Antp - chr3R 6914965 intron Antp - chr3R_4_6910001 chr3R_6910001 RAL-531 1695 chr3R 6961176 6961204 chr3R 6961275 6961297 8 98 2.0 11.0 6.5 1.1 121 chr3R 6961176 intron Antp - chr3R 6961236 intron Antp - chr3R 6961297 intron Antp - chr3R_8_6960001 chr3R_6960001 RAL-531 1696 chr3R 6983119 6983147 chr3R 6983265 6983289 8 145 1.5 7.5 4.5 1.5 170 chr3R 6983119 intron Antp - chr3R 6983204 intron Antp - chr3R 6983289 intron Antp - chr3R_8_6980001 chr3R_6980001 RAL-531 1697 chr3R 7103301 7103317 chr3R 7103371 7103378 5 66 4.5 3.0 3.8 1.0 77 chr3R 7103301 intron Alh - chr3R 7103340 intron Alh - chr3R 7103378 intron Alh - chr3R_5_7100001 chr3R_7100001 RAL-531 1698 chr3R 7121729 7121738 chr3R 7121832 7121837 4 102 1.5 8.5 5.0 0.7 108 chr3R 7121729 exon Alh - chr3R 7121783 intron Alh - chr3R 7121837 intron Alh - chr3R_4_7120001 chr3R_7120001 RAL-531 1699 chr3R 7125068 7125099 chr3R 7125162 7125195 14 95 1.5 2.5 2.0 4.7 127 chr3R 7125068 intron CG10098 + chr3R 7125132 intron CG10098 + chr3R 7125195 intron CG10098 + chr3R_14_7125001 chr3R_7125001 RAL-531 1700 chr3R 7126488 7126506 chr3R 7126603 7126616 12 114 12.0 6.0 9.0 1.2 128 chr3R 7126488 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126552 3` UTR CG10068 - chr3R 7126616 3` UTR CG10068 - chr3R_12_7125001 chr3R_7125001 RAL-531 1701 chr3R 7126517 7126533 chr3R 7126601 7126648 10 110 6.0 6.0 6.0 1.4 131 chr3R 7126517 3` UTR CG10068 - chr3R 7126582 3` UTR CG10068 - chr3R 7126648 3` UTR CG10068 - chr3R_10_7125001 chr3R_7125001 RAL-531 1702 chr3R 7173659 7173706 chr3R 7173759 7173796 19 99 5.0 6.5 5.8 2.8 137 chr3R 7173659 intron sas + chr3R 7173728 intron sas + chr3R 7173796 intron sas + chr3R_19_7170001 chr3R_7170001 RAL-531 1703 chr3R 7217438 7217490 chr3R 7217679 7217731 16 240 3.5 7.0 5.2 2.6 293 chr3R 7217438 intergenic CG14605 -,CG14606 - chr3R 7217584 intergenic CG14605 - chr3R 7217731 exon CG14605 - chr3R_16_7215001 chr3R_7215001 RAL-531 1704 chr3R 7252404 7252425 chr3R 7252511 7252531 5 107 4.0 4.5 4.2 1.0 127 chr3R 7252404 3` UTR Gld - chr3R 7252468 3` UTR Gld - chr3R 7252531 3` UTR Gld - chr3R_5_7250001 chr3R_7250001 RAL-531 1705 chr3R 7344881 7344928 chr3R 7344977 7345025 10 97 5.0 2.0 3.5 2.2 144 chr3R 7344881 intergenic CG31496 + chr3R 7344953 intergenic CG31496 + chr3R 7345025 intergenic CG31496 + chr3R_10_7340001 chr3R_7340001 RAL-531 1706 chr3R 7359063 7359105 chr3R 7359167 7359189 8 102 1.5 2.5 2.0 2.7 126 chr3R 7359063 intergenic not near genes chr3R 7359126 intergenic not near genes chr3R 7359189 intergenic not near genes chr3R_8_7355001 chr3R_7355001 RAL-531 1707 chr3R 7401722 7401766 chr3R 7401848 7401892 10 122 3.5 3.0 3.2 2.4 170 chr3R 7401722 intergenic not near genes chr3R 7401807 intergenic not near genes chr3R 7401892 intergenic not near genes chr3R_10_7400001 chr3R_7400001 RAL-531 1708 chr3R 7447974 7448011 chr3R 7448072 7448109 13 96 5.0 7.0 6.0 1.9 135 chr3R 7447974 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448109 intergenic not near genes chr3R_13_7445001 chr3R_7445001 RAL-531 1709 chr3R 7552963 7552996 chr3R 7553051 7553104 14 102 2.5 2.5 2.5 4.0 141 chr3R 7552963 intergenic not near genes chr3R 7553034 intergenic not near genes chr3R 7553104 intergenic not near genes chr3R_14_7550001 chr3R_7550001 RAL-531 1710 chr3R 7625281 7625313 chr3R 7625747 7625781 10 466 3.5 4.0 3.8 2.1 500 chr3R 7625281 intron CG34127 - chr3R 7625531 intron CG34127 - chr3R 7625781 intron CG34127 - chr3R_10_7625001 chr3R_7625001 RAL-531 1711 chr3R 7654983 7655021 chr3R 7655085 7655118 13 99 3.5 2.0 2.8 3.4 135 chr3R 7654983 intergenic not near genes chr3R 7655050 intergenic not near genes chr3R 7655118 intergenic not near genes chr3R_13_7655001 chr3R_7655001 RAL-531 1712 chr3R 7677899 7677938 chr3R 7678032 7678071 10 128 5.5 4.5 5.0 1.7 172 chr3R 7677899 intron Nlg1 + chr3R 7677985 intron Nlg1 + chr3R 7678071 intron Nlg1 + chr3R_10_7675001 chr3R_7675001 RAL-531 1713 chr3R 7680858 7680873 chr3R 7681478 7681485 4 622 0.0 0.5 0.2 3.3 627 chr3R 7680858 intron Nlg1 + chr3R 7681172 intron Nlg1 + chr3R 7681485 intron Nlg1 + chr3R_4_7680001 chr3R_7680001 RAL-531 1714 chr3R 7694557 7694609 chr3R 7713638 7713690 invader3 15 19076 4.0 1.0 2.5 4.3 19133 chr3R 7694557 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713690 intergenic not near genes chr3R_15_7700001 chr3R_7700001 RAL-531 1715 chr3R 7729445 7729494 chr3R 7737403 7737452 Stalker2 17 7956 4.5 3.5 4.0 3.4 8007 chr3R 7729445 intergenic not near genes chr3R 7733448 intergenic not near genes chr3R 7737452 intergenic not near genes chr3R_17_7730001 chr3R_7730001 RAL-531 1716 chr3R 7814016 7814066 chr3R 7814195 7814246 8 178 4.5 1.0 2.8 2.1 230 chr3R 7814016 intergenic CG34384 + chr3R 7814131 intergenic CG34384 + chr3R 7814246 intergenic CG34384 + chr3R_8_7810001 chr3R_7810001 RAL-531 1717 chr3R 7956613 7956654 chr3R 7956726 7956744 8 106 6.0 6.5 6.2 1.1 131 chr3R 7956613 intron dsx - chr3R 7956678 intron dsx - chr3R 7956744 intron dsx - chr3R_8_7955001 chr3R_7955001 RAL-531 1718 chr3R 7973298 7973339 chr3R 7974380 7974421 1360 19 1082 6.0 4.0 5.0 3.2 1123 chr3R 7973298 intergenic not near genes chr3R 7973860 intergenic not near genes chr3R 7974421 3` UTR CD98hc - chr3R_19_7970001 chr3R_7970001 RAL-531 1719 chr3R 7987179 7987214 chr3R 7987286 7987321 13 105 3.0 11.0 7.0 1.6 142 chr3R 7987179 intron CG2781 - chr3R 7987250 intron CG2781 - chr3R 7987321 intron CG2781 - chr3R_13_7985001 chr3R_7985001 RAL-531 1720 chr3R 8090251 8090304 chr3R 8090448 8090500 18 196 2.0 5.5 3.8 3.8 249 chr3R 8090251 5` UTR CR44330 + chr3R 8090376 intergenic CR44330 + chr3R 8090500 intergenic CR44330 + chr3R_18_8090001 chr3R_8090001 RAL-531 1721 chr3R 8090559 8090569 chr3R 8094056 8094065 297 4 3497 3.0 8.5 5.8 0.6 3506 chr3R 8090559 intergenic CR44330 + chr3R 8092312 intergenic not near genes chr3R 8094065 intergenic CG7900 + chr3R_4_8090001 chr3R_8090001 RAL-531 1722 chr3R 8094387 8094434 chr3R 8099712 8099759 Transpac 13 5325 6.5 5.5 6.0 1.9 5372 chr3R 8094387 intron CG7900 + chr3R 8097073 intron CG7900 + chr3R 8099759 intron CG7900 + chr3R_13_8095001 chr3R_8095001 RAL-531 1723 chr3R 8101759 8101785 chr3R 8104863 8104889 G2 4 3104 3.0 5.0 4.0 0.8 3130 chr3R 8101759 exon CG7900 + chr3R 8103324 intron CG7900 + chr3R 8104889 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-531 1724 chr3R 8107372 8107412 chr3R 8107526 8107539 15 152 1.5 5.5 3.5 3.3 167 chr3R 8107372 intron puc + chr3R 8107456 intron puc + chr3R 8107539 intron puc + chr3R_15_8105001 chr3R_8105001 RAL-531 1725 chr3R 8403017 8403028 chr3R 8412189 8412195 roo 5 9170 3.5 1.5 2.5 1.4 9178 chr3R 8403017 intron CG45263 - chr3R 8407606 intron CG45263 - chr3R 8412195 intron CG45263 - chr3R_5_8405001 chr3R_8405001 RAL-531 1726 chr3R 8403031 8403040 chr3R 8412172 8412176 roo 4 9154 3.0 1.0 2.0 1.3 9145 chr3R 8403031 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412176 intron CG45263 - chr3R_4_8405001 chr3R_8405001 RAL-531 1727 chr3R 8478071 8478110 chr3R 8478163 8478210 15 93 3.5 1.5 2.5 4.3 139 chr3R 8478071 intergenic CG45263 - chr3R 8478140 intergenic not near genes chr3R 8478210 intergenic not near genes chr3R_15_8475001 chr3R_8475001 RAL-531 1728 chr3R 8541340 8541368 chr3R 8541424 8541468 4 82 1.0 2.0 1.5 1.6 128 chr3R 8541340 intergenic not near genes chr3R 8541404 intergenic not near genes chr3R 8541468 intergenic not near genes chr3R_4_8540001 chr3R_8540001 RAL-531 1729 chr3R 8570468 8570508 chr3R 8575124 8575143 HMS-Beagle 6 4646 4.0 8.0 6.0 0.9 4675 chr3R 8570468 intergenic not near genes chr3R 8572806 intergenic not near genes chr3R 8575143 intergenic not near genes chr3R_6_8570001 chr3R_8570001 RAL-531 1730 chr3R 8601764 8601800 chr3R 8610936 8610967 roo 12 9167 6.0 9.0 7.5 1.4 9203 chr3R 8601764 intron 5-HT2B + chr3R 8606366 intron 5-HT2B + chr3R 8610967 intron 5-HT2B + chr3R_12_8605001 chr3R_8605001 RAL-531 1731 chr3R 8685282 8685313 chr3R 8685402 8685433 11 119 2.0 4.0 3.0 2.8 151 chr3R 8685282 intron CR44937 - chr3R 8685358 intron CR44937 - chr3R 8685433 intron CR44937 - chr3R_11_8685001 chr3R_8685001 RAL-531 1732 chr3R 8707357 8707379 chr3R 8709818 8709839 jockey 5 2459 1.5 4.5 3.0 1.2 2482 chr3R 8707357 intergenic not near genes chr3R 8708598 intergenic not near genes chr3R 8709839 intergenic not near genes chr3R_5_8705001 chr3R_8705001 RAL-531 1733 chr3R 8798632 8798683 chr3R 8798735 8798786 18 98 3.0 4.0 3.5 4.0 154 chr3R 8798632 intron,intron Pif1A -,Pif1B - chr3R 8798709 intron,intron Pif1A -,Pif1B - chr3R 8798786 intron,intron Pif1A -,Pif1B - chr3R_18_8795001 chr3R_8795001 RAL-531 1734 chr3R 8809078 8809102 chr3R 8809161 8809214 11 97 1.5 1.5 1.5 4.4 136 chr3R 8809078 3` UTR CG9837 - chr3R 8809146 exon CG9837 - chr3R 8809214 exon CG9837 - chr3R_11_8805001 chr3R_8805001 RAL-531 1735 chr3R 8837937 8837970 chr3R 8838077 8838115 13 145 4.5 7.0 5.8 1.9 178 chr3R 8837937 intron pyd - chr3R 8838026 intron pyd - chr3R 8838115 intron pyd - chr3R_13_8835001 chr3R_8835001 RAL-531 1736 chr3R 8917876 8917908 chr3R 8917976 8918008 14 99 3.0 2.0 2.5 4.0 132 chr3R 8917876 intron pyd - chr3R 8917942 intron pyd - chr3R 8918008 intron pyd - chr3R_14_8915001 chr3R_8915001 RAL-531 1737 chr3R 8940108 8940153 chr3R 8940218 8940263 19 108 4.5 3.5 4.0 3.8 155 chr3R 8940108 intron skap + chr3R 8940186 intron skap + chr3R 8940263 intron skap + chr3R_19_8940001 chr3R_8940001 RAL-531 1738 chr3R 8974618 8974666 chr3R 8974719 8974766 10 100 3.0 6.5 4.8 1.7 148 chr3R 8974618 intergenic not near genes chr3R 8974692 intergenic not near genes chr3R 8974766 intergenic not near genes chr3R_10_8970001 chr3R_8970001 RAL-531 1739 chr3R 9036360 9036405 chr3R 9036456 9036503 19 96 4.5 6.5 5.5 2.9 143 chr3R 9036360 intron neur - chr3R 9036432 intron neur - chr3R 9036503 intron neur - chr3R_19_9035001 chr3R_9035001 RAL-531 1740 chr3R 9069474 9069520 chr3R 9069568 9069581 17 89 5.5 3.5 4.5 3.1 107 chr3R 9069474 3` UTR pum - chr3R 9069528 3` UTR pum - chr3R 9069581 3` UTR pum - chr3R_17_9065001 chr3R_9065001 RAL-531 1741 chr3R 9079562 9079576 chr3R 9079669 9079682 4 104 11.5 3.5 7.5 0.5 120 chr3R 9079562 intron pum - chr3R 9079622 intron pum - chr3R 9079682 intron pum - chr3R_4_9075001 chr3R_9075001 RAL-531 1742 chr3R 9101832 9101864 chr3R 9101950 9101980 9 117 4.5 8.0 6.2 1.2 148 chr3R 9101832 intron pum - chr3R 9101906 intron pum - chr3R 9101980 intron pum - chr3R_9_9100001 chr3R_9100001 RAL-531 1743 chr3R 9107453 9107491 chr3R 9107574 9107612 13 120 2.5 5.0 3.8 2.7 159 chr3R 9107453 intron pum - chr3R 9107532 intron pum - chr3R 9107612 intron pum - chr3R_13_9105001 chr3R_9105001 RAL-531 1744 chr3R 9108847 9108881 chr3R 9108943 9108977 8 95 6.5 3.0 4.8 1.4 130 chr3R 9108847 intron pum - chr3R 9108912 intron pum - chr3R 9108977 intron pum - chr3R_8_9105001 chr3R_9105001 RAL-531 1745 chr3R 9234107 9234138 chr3R 9234238 9234286 12 144 4.5 6.0 5.2 1.9 179 chr3R 9234107 5` UTR pum - chr3R 9234196 5` UTR pum - chr3R 9234286 5` UTR pum - chr3R_12_9230001 chr3R_9230001 RAL-531 1746 chr3R 9278763 9278807 chr3R 9284043 9284087 Rt1a 11 5276 9.5 3.5 6.5 1.5 5324 chr3R 9278763 intergenic not near genes chr3R 9281425 intergenic not near genes chr3R 9284087 intergenic not near genes chr3R_11_9280001 chr3R_9280001 RAL-531 1747 chr3R 9284864 9284904 chr3R 9284967 9285005 20 104 3.5 3.5 3.5 4.4 141 chr3R 9284864 intergenic not near genes chr3R 9284934 intergenic not near genes chr3R 9285005 intergenic not near genes chr3R_20_9280001 chr3R_9280001 RAL-531 1748 chr3R 9319575 9319606 chr3R 9320006 9320056 jockey 14 450 4.0 4.0 4.0 2.8 481 chr3R 9319575 intron CG8861 - chr3R 9319816 intron CG8861 - chr3R 9320056 intron CG8861 - chr3R_14_9315001 chr3R_9315001 RAL-531 1749 chr3R 9361804 9361843 chr3R 9362065 9362104 pogo 16 260 3.0 5.5 4.2 3.1 300 chr3R 9361804 3` UTR CG45050 + chr3R 9361954 3` UTR CG45050 + chr3R 9362104 3` UTR CG45050 + chr3R_16_9360001 chr3R_9360001 RAL-531 1750 chr3R 9382811 9382845 chr3R 9382944 9382990 10 142 4.5 3.5 4.0 2.0 179 chr3R 9382811 intron FER - chr3R 9382900 intron FER - chr3R 9382990 intron FER - chr3R_10_9380001 chr3R_9380001 RAL-531 1751 chr3R 9447435 9447459 chr3R 9447559 9447583 6 123 6.0 4.0 5.0 1.0 148 chr3R 9447435 intron ps + chr3R 9447509 intron ps + chr3R 9447583 intron ps + chr3R_6_9445001 chr3R_9445001 RAL-531 1752 chr3R 9599831 9599837 chr3R 9599994 9599995 5 174 3.0 7.0 5.0 0.8 164 chr3R 9599831 intron CG8312 + chr3R 9599913 intron CG8312 + chr3R 9599995 intron CG8312 + chr3R_5_9595001 chr3R_9595001 RAL-531 1753 chr3R 9608648 9608687 chr3R 9608931 9608973 8 282 1.5 2.5 2.0 2.7 325 chr3R 9608648 intron CG8312 + chr3R 9608810 intron CG8312 + chr3R 9608973 intron CG8312 + chr3R_8_9605001 chr3R_9605001 RAL-531 1754 chr3R 9699957 9699964 chr3R 9700066 9700073 4 109 6.5 4.5 5.5 0.6 116 chr3R 9699957 intron Unc-115a - chr3R 9700015 intron Unc-115a - chr3R 9700073 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 RAL-531 1755 chr3R 9699965 9700004 chr3R 9700065 9700113 1360 8 103 1.5 4.5 3.0 2.0 148 chr3R 9699965 intron Unc-115a - chr3R 9700039 intron Unc-115a - chr3R 9700113 intron Unc-115a - chr3R_8_9700001 chr3R_9700001 RAL-531 1756 chr3R 9858667 9858695 chr3R 9858784 9858814 9 119 9.5 2.5 6.0 1.3 147 chr3R 9858667 intron Teh1 - chr3R 9858740 intron Teh1 - chr3R 9858814 intron Teh1 - chr3R_9_9855001 chr3R_9855001 RAL-531 1757 chr3R 9859979 9860002 chr3R 9860113 9860135 4 134 0.5 2.0 1.2 1.8 156 chr3R 9859979 intron Teh1 - chr3R 9860057 intron Teh1 - chr3R 9860135 intron Teh1 - chr3R_4_9860001 chr3R_9860001 RAL-531 1758 chr3R 10073761 10073767 chr3R 10073888 10073893 6 128 7.5 6.5 7.0 0.8 132 chr3R 10073761 3` UTR nerfin-2 + chr3R 10073827 3` UTR CG5361 - chr3R 10073893 exon CG5361 - chr3R_6_10070001 chr3R_10070001 RAL-531 1759 chr3R 10073769 10073803 chr3R 10073883 10073932 13 127 2.5 4.5 3.5 2.9 163 chr3R 10073769 intergenic nerfin-2 +,CG5361 - chr3R 10073850 3` UTR CG5361 - chr3R 10073932 exon CG5361 - chr3R_13_10070001 chr3R_10070001 RAL-531 1760 chr3R 10174103 10174149 chr3R 10174205 10174251 9 98 1.0 5.5 3.2 2.1 148 chr3R 10174103 intron CG12814 - chr3R 10174177 intron CG12814 - chr3R 10174251 intron CG12814 - chr3R_9_10170001 chr3R_10170001 RAL-531 1761 chr3R 10231771 10231812 chr3R 10237368 10237408 mdg3 9 5596 4.5 7.0 5.8 1.3 5637 chr3R 10231771 intron CG42795 + chr3R 10234590 intron CG42795 + chr3R 10237408 intron CG42795 + chr3R_9_10230001 chr3R_10230001 RAL-531 1762 chr3R 10255361 10255386 chr3R 10260821 10260846 I-element 15 5459 7.0 4.5 5.8 2.2 5485 chr3R 10255361 3` UTR Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260846 exon Sirt6 - chr3R_15_10255001 chr3R_10255001 RAL-531 1763 chr3R 10277129 10277161 chr3R 10277212 10277261 7 93 6.0 3.0 4.5 1.3 132 chr3R 10277129 intron CG43143 + chr3R 10277195 intron CG43143 + chr3R 10277261 intron CG43143 + chr3R_7_10275001 chr3R_10275001 RAL-531 1764 chr3R 10403038 10403062 chr3R 10403139 10403163 10 101 3.0 12.5 7.8 1.1 125 chr3R 10403038 3` UTR CG6325 - chr3R 10403100 3` UTR CG6325 - chr3R 10403163 3` UTR CG6325 - chr3R_10_10400001 chr3R_10400001 RAL-531 1765 chr3R 10501477 10501519 chr3R 10501572 10501614 8 90 0.5 0.5 0.5 5.3 137 chr3R 10501477 intergenic not near genes chr3R 10501546 intergenic not near genes chr3R 10501614 intergenic not near genes chr3R_8_10500001 chr3R_10500001 RAL-531 1766 chr3R 10531851 10531886 chr3R 10531952 10531987 6 97 3.0 0.0 1.5 2.4 136 chr3R 10531851 intron hth - chr3R 10531919 intron hth - chr3R 10531987 intron hth - chr3R_6_10530001 chr3R_10530001 RAL-531 1767 chr3R 10535316 10535343 chr3R 10535429 10535456 10 113 4.5 0.0 2.2 3.1 140 chr3R 10535316 intron hth - chr3R 10535386 intron hth - chr3R 10535456 intron hth - chr3R_10_10535001 chr3R_10535001 RAL-531 1768 chr3R 10561793 10561822 chr3R 10561902 10561922 7 103 3.5 1.5 2.5 2.0 129 chr3R 10561793 intron hth - chr3R 10561858 intron hth - chr3R 10561922 exon hth - chr3R_7_10560001 chr3R_10560001 RAL-531 1769 chr3R 10804161 10804198 chr3R 10811707 10811750 17.6 16 7550 4.5 6.0 5.2 2.6 7589 chr3R 10804161 intergenic CG14692 - chr3R 10807956 intergenic not near genes chr3R 10811750 3` UTR CG14693 - chr3R_16_10805001 chr3R_10805001 RAL-531 1770 chr3R 10876673 10876697 chr3R 10877305 10877347 6 646 5.5 2.5 4.0 1.2 674 chr3R 10876673 intron Sodh-2 + chr3R 10877010 exon,3` UTR Sodh-2 +,CR45195 - chr3R 10877347 exon,3` UTR Sodh-2 +,CR45195 - chr3R_6_10875001 chr3R_10875001 RAL-531 1771 chr3R 10952769 10952781 chr3R 10952862 10952884 4 100 2.5 1.5 2.0 1.3 115 chr3R 10952769 intergenic not near genes chr3R 10952826 intergenic not near genes chr3R 10952884 intergenic not near genes chr3R_4_10950001 chr3R_10950001 RAL-531 1772 chr3R 11008324 11008368 chr3R 11008698 11008747 11 371 2.0 1.5 1.8 3.9 423 chr3R 11008324 intron CG34114 + chr3R 11008536 intron CG34114 + chr3R 11008747 intron CG34114 + chr3R_11_11005001 chr3R_11005001 RAL-531 1773 chr3R 11008765 11008785 chr3R 11008947 11008968 5 183 3.5 2.5 3.0 1.2 203 chr3R 11008765 intron CG34114 + chr3R 11008866 intron CG34114 + chr3R 11008968 intron CG34114 + chr3R_5_11005001 chr3R_11005001 RAL-531 1774 chr3R 11065570 11065618 chr3R 11071248 11071296 297 6 5678 2.0 3.0 2.5 1.7 5726 chr3R 11065570 intergenic not near genes chr3R 11068433 intergenic not near genes chr3R 11071296 intergenic not near genes chr3R_6_11065001 chr3R_11065001 RAL-531 1775 chr3R 11197968 11198002 chr3R 11198087 11198120 9 115 4.5 1.0 2.8 2.4 152 chr3R 11197968 intron cu + chr3R 11198044 intron cu + chr3R 11198120 intron cu + chr3R_9_11195001 chr3R_11195001 RAL-531 1776 chr3R 11263495 11263523 chr3R 11263583 11263604 6 91 2.0 2.5 2.2 1.9 109 chr3R 11263495 intergenic not near genes chr3R 11263550 intergenic not near genes chr3R 11263604 intergenic not near genes chr3R_6_11260001 chr3R_11260001 RAL-531 1777 chr3R 11342524 11342569 chr3R 11342619 11342665 7 94 5.0 2.0 3.5 1.6 141 chr3R 11342524 intron pros + chr3R 11342594 intron pros + chr3R 11342665 intron pros + chr3R_7_11340001 chr3R_11340001 RAL-531 1778 chr3R 11379245 11379266 chr3R 11388390 11388428 roo 9 9166 3.0 4.5 3.8 1.9 9183 chr3R 11379245 intron pros + chr3R 11383836 intron pros + chr3R 11388428 intron pros + chr3R_9_11380001 chr3R_11380001 RAL-531 1779 chr3R 11452057 11452102 chr3R 11452163 11452209 17 103 5.0 3.0 4.0 3.4 152 chr3R 11452057 intron CG17230 + chr3R 11452133 intron CG17230 + chr3R 11452209 intron CG17230 + chr3R_17_11450001 chr3R_11450001 RAL-531 1780 chr3R 11455563 11455576 chr3R 11455709 11455722 5 146 10.5 5.0 7.8 0.6 159 chr3R 11455563 intron,intron CG17230 +,PGRP-LB - chr3R 11455642 intron,intron CG17230 +,PGRP-LB - chr3R 11455722 intron,intron CG17230 +,PGRP-LB - chr3R_5_11455001 chr3R_11455001 RAL-531 1781 chr3R 11455578 11455612 chr3R 11455708 11455758 16 144 3.5 5.0 4.2 3.1 180 chr3R 11455578 intron,intron CG17230 +,PGRP-LB - chr3R 11455668 intron,intron CG17230 +,PGRP-LB - chr3R 11455758 intron,intron CG17230 +,PGRP-LB - chr3R_16_11455001 chr3R_11455001 RAL-531 1782 chr3R 11593794 11593800 chr3R 11593899 11593918 4 119 1.0 4.5 2.8 1.1 124 chr3R 11593794 intron Jupiter - chr3R 11593856 intron Jupiter - chr3R 11593918 intron Jupiter - chr3R_4_11590001 chr3R_11590001 RAL-531 1783 chr3R 11664786 11664814 chr3R 11664893 11664926 5 107 3.0 5.5 4.2 1.0 140 chr3R 11664786 intron CG42327 + chr3R 11664856 intron CG42327 + chr3R 11664926 intron CG42327 + chr3R_5_11660001 chr3R_11660001 RAL-531 1784 chr3R 11694706 11694749 chr3R 11694819 11694862 19 112 3.5 6.0 4.8 3.3 156 chr3R 11694706 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694862 intergenic not near genes chr3R_19_11690001 chr3R_11690001 RAL-531 1785 chr3R 11708617 11708663 chr3R 11708842 11708891 16 227 3.0 4.5 3.8 3.3 274 chr3R 11708617 intergenic not near genes chr3R 11708754 intergenic not near genes chr3R 11708891 intergenic not near genes chr3R_16_11705001 chr3R_11705001 RAL-531 1786 chr3R 11713475 11713518 chr3R 11713572 11713615 13 96 2.5 2.0 2.2 4.1 140 chr3R 11713475 intergenic not near genes chr3R 11713545 intergenic not near genes chr3R 11713615 intergenic not near genes chr3R_13_11710001 chr3R_11710001 RAL-531 1787 chr3R 11830336 11830356 chr3R 11830434 11830460 8 103 1.5 3.0 2.2 2.5 124 chr3R 11830336 intron CG6959 - chr3R 11830398 intron CG6959 - chr3R 11830460 intron CG6959 - chr3R_8_11830001 chr3R_11830001 RAL-531 1788 chr3R 11841089 11841099 chr3R 11846263 11846295 BS 4 5188 2.5 5.0 3.8 0.8 5206 chr3R 11841089 intron CG6959 - chr3R 11843692 intron CG6959 - chr3R 11846295 intron CG6959 - chr3R_4_11840001 chr3R_11840001 RAL-531 1789 chr3R 11919303 11919334 chr3R 11919399 11919407 5 83 3.5 2.5 3.0 1.2 104 chr3R 11919303 intron Cad87A - chr3R 11919355 intron Cad87A - chr3R 11919407 intron Cad87A - chr3R_5_11915001 chr3R_11915001 RAL-531 1790 chr3R 11945363 11945406 chr3R 11945481 11945495 18 112 1.0 4.5 2.8 4.7 132 chr3R 11945363 intron Cad87A - chr3R 11945429 intron Cad87A - chr3R 11945495 intron Cad87A - chr3R_18_11945001 chr3R_11945001 RAL-531 1791 chr3R 11957841 11957866 chr3R 11958139 11958167 S-element 11 301 8.5 0.0 4.2 2.1 326 chr3R 11957841 intergenic not near genes chr3R 11958004 intergenic not near genes chr3R 11958167 intergenic not near genes chr3R_11_11955001 chr3R_11955001 RAL-531 1792 chr3R 12022869 12022910 chr3R 12025066 12025086 pogo 8 2193 2.5 7.5 5.0 1.3 2217 chr3R 12022869 intergenic not near genes chr3R 12023978 intergenic not near genes chr3R 12025086 intergenic not near genes chr3R_8_12020001 chr3R_12020001 RAL-531 1793 chr3R 12116112 12116153 chr3R 12116227 12116260 10 107 2.0 3.5 2.8 2.6 148 chr3R 12116112 intergenic not near genes chr3R 12116186 intergenic not near genes chr3R 12116260 intergenic not near genes chr3R_10_12115001 chr3R_12115001 RAL-531 1794 chr3R 12165845 12165896 chr3R 12165943 12165994 19 98 6.0 3.5 4.8 3.3 149 chr3R 12165845 intron Cpn - chr3R 12165920 intron Cpn - chr3R 12165994 intron Cpn - chr3R_19_12165001 chr3R_12165001 RAL-531 1795 chr3R 12383849 12383857 chr3R 12383968 12383976 5 119 0.0 7.0 3.5 1.1 127 chr3R 12383849 intron GstD11 + chr3R 12383912 intron GstD11 + chr3R 12383976 intron GstD11 + chr3R_5_12380001 chr3R_12380001 RAL-531 1796 chr3R 12555095 12555144 chr3R 12555279 12555328 14 182 1.5 3.0 2.2 4.4 233 chr3R 12555095 intron Octbeta2R - chr3R 12555212 intron Octbeta2R - chr3R 12555328 intron Octbeta2R - chr3R_14_12555001 chr3R_12555001 RAL-531 1797 chr3R 12603839 12603873 chr3R 12603946 12603959 5 89 1.5 3.5 2.5 1.4 120 chr3R 12603839 intergenic not near genes chr3R 12603899 intergenic not near genes chr3R 12603959 intergenic not near genes chr3R_5_12600001 chr3R_12600001 RAL-531 1798 chr3R 12704814 12705042 chr3R 12704913 12705139 30 96 6.5 5.5 6.0 4.3 325 chr3R 12704814 3` UTR Past1 + chr3R 12704976 intergenic Past1 +,CG12279 + chr3R 12705139 5` UTR CG12279 + chr3R_30_12700001 chr3R_12700001 RAL-531 1799 chr3R 12735169 12735182 chr3R 12735435 12735452 4 269 3.0 1.5 2.2 1.2 283 chr3R 12735169 intergenic not near genes chr3R 12735310 intergenic not near genes chr3R 12735452 intergenic not near genes chr3R_4_12735001 chr3R_12735001 RAL-531 1800 chr3R 12763116 12763152 chr3R 12763205 12763249 19 96 0.0 1.5 0.8 10.6 133 chr3R 12763116 intron beat-Vc - chr3R 12763182 intron beat-Vc - chr3R 12763249 intron beat-Vc - chr3R_19_12760001 chr3R_12760001 RAL-531 1801 chr3R 12768830 12768875 chr3R 12768935 12768957 9 102 3.5 6.5 5.0 1.5 127 chr3R 12768830 intron beat-Vc - chr3R 12768894 intron beat-Vc - chr3R 12768957 intron beat-Vc - chr3R_9_12765001 chr3R_12765001 RAL-531 1802 chr3R 12787931 12787955 chr3R 12788032 12788058 9 103 2.5 5.0 3.8 1.9 127 chr3R 12787931 intergenic not near genes chr3R 12787994 intergenic not near genes chr3R 12788058 intergenic not near genes chr3R_9_12785001 chr3R_12785001 RAL-531 1803 chr3R 12814230 12814264 chr3R 12814322 12814361 5 95 3.0 3.5 3.2 1.2 131 chr3R 12814230 intron CG31345 - chr3R 12814296 intron CG31345 - chr3R 12814361 intron CG31345 - chr3R_5_12810001 chr3R_12810001 RAL-531 1804 chr3R 12864525 12864552 chr3R 12865047 12865074 roo 7 522 4.5 2.0 3.2 1.7 549 chr3R 12864525 intergenic not near genes chr3R 12864800 intergenic not near genes chr3R 12865074 intergenic not near genes chr3R_7_12860001 chr3R_12860001 RAL-531 1805 chr3R 12880099 12880142 chr3R 12880194 12880211 11 84 3.5 2.0 2.8 2.9 112 chr3R 12880099 intergenic not near genes chr3R 12880155 intergenic not near genes chr3R 12880211 intergenic not near genes chr3R_11_12880001 chr3R_12880001 RAL-531 1806 chr3R 12920184 12920185 chr3R 12925362 12925370 copia 8 5190 1.5 6.0 3.8 1.7 5186 chr3R 12920184 intron beat-Vb + chr3R 12922777 intron beat-Vb + chr3R 12925370 intron beat-Vb + chr3R_8_12920001 chr3R_12920001 RAL-531 1807 chr3R 12967353 12967381 chr3R 12967436 12967467 6 92 2.0 4.5 3.2 1.4 114 chr3R 12967353 exon,5` UTR grsm -,CG14384 - chr3R 12967410 intron,intron grsm -,CG14384 - chr3R 12967467 exon,5` UTR grsm -,CG14384 - chr3R_6_12965001 chr3R_12965001 RAL-531 1808 chr3R 12999097 12999150 chr3R 12999195 12999248 14 98 2.0 5.5 3.8 2.9 151 chr3R 12999097 exon CG7518 + chr3R 12999172 intron CG7518 + chr3R 12999248 intron CG7518 + chr3R_14_12995001 chr3R_12995001 RAL-531 1809 chr3R 13063980 13064006 chr3R 13064095 13064121 4 115 2.0 6.5 4.2 0.8 141 chr3R 13063980 intron sim + chr3R 13064050 intron sim + chr3R 13064121 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-531 1810 chr3R 13066995 13067125 chr3R 13067092 13067221 16 99 0.5 0.0 0.2 13.3 226 chr3R 13066995 intron sim + chr3R 13067108 intron sim + chr3R 13067221 intron sim + chr3R_16_13065001 chr3R_13065001 RAL-531 1811 chr3R 13135816 13135852 chr3R 13138001 13138037 pogo 8 2185 2.0 5.0 3.5 1.8 2221 chr3R 13135816 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136926 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138037 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13135001 chr3R_13135001 RAL-531 1812 chr3R 13195975 13195982 chr3R 13196051 13196078 4 89 2.0 2.0 2.0 1.3 103 chr3R 13195975 intergenic not near genes chr3R 13196026 intergenic not near genes chr3R 13196078 intergenic not near genes chr3R_4_13195001 chr3R_13195001 RAL-531 1813 chr3R 13197159 13197192 chr3R 13198459 13198492 9 1299 3.5 25.5 14.5 0.6 1333 chr3R 13197159 intergenic not near genes chr3R 13197826 intergenic not near genes chr3R 13198492 intergenic not near genes chr3R_9_13195001 chr3R_13195001 RAL-531 1814 chr3R 13197028 13197075 chr3R 13198478 13198525 10 1452 10.5 26.5 18.5 0.5 1497 chr3R 13197028 intergenic not near genes chr3R 13197776 intergenic not near genes chr3R 13198525 intergenic not near genes chr3R_10_13195001 chr3R_13195001 RAL-531 1815 chr3R 13201766 13201796 chr3R 13201883 13201913 14 115 0.5 8.0 4.2 2.7 147 chr3R 13201766 intergenic not near genes chr3R 13201840 intergenic not near genes chr3R 13201913 intergenic not near genes chr3R_14_13200001 chr3R_13200001 RAL-531 1816 chr3R 13314087 13314119 chr3R 13318889 13318927 Doc 4 4806 6.0 4.0 5.0 0.7 4840 chr3R 13314087 intergenic not near genes chr3R 13316507 intergenic not near genes chr3R 13318927 intergenic CG45080 - chr3R_4_13315001 chr3R_13315001 RAL-531 1817 chr3R 13348983 13349023 chr3R 13349079 13349119 18 94 7.5 5.5 6.5 2.4 136 chr3R 13348983 intergenic not near genes chr3R 13349051 intergenic not near genes chr3R 13349119 intergenic not near genes chr3R_18_13345001 chr3R_13345001 RAL-531 1818 chr3R 13418653 13418681 chr3R 13418749 13418777 12 95 4.0 7.0 5.5 1.8 124 chr3R 13418653 intergenic not near genes chr3R 13418715 intergenic not near genes chr3R 13418777 intergenic not near genes chr3R_12_13415001 chr3R_13415001 RAL-531 1819 chr3R 13435368 13435420 chr3R 13435563 13435603 13 193 4.5 1.5 3.0 3.2 235 chr3R 13435368 intergenic yrt - chr3R 13435486 intergenic not near genes chr3R 13435603 intergenic not near genes chr3R_13_13435001 chr3R_13435001 RAL-531 1820 chr3R 13517207 13517253 chr3R 13520044 13520090 jockey 4 2837 5.0 0.0 2.5 1.1 2883 chr3R 13517207 intergenic not near genes chr3R 13518648 intergenic not near genes chr3R 13520090 intergenic not near genes chr3R_4_13515001 chr3R_13515001 RAL-531 1821 chr3R 13603040 13603074 chr3R 13603151 13603164 12 109 3.5 4.5 4.0 2.4 124 chr3R 13603040 intergenic not near genes chr3R 13603102 intergenic not near genes chr3R 13603164 intergenic not near genes chr3R_12_13600001 chr3R_13600001 RAL-531 1822 chr3R 13603355 13603364 chr3R 13603438 13603475 6 105 3.0 4.0 3.5 1.3 120 chr3R 13603355 intergenic not near genes chr3R 13603415 intergenic not near genes chr3R 13603475 intergenic not near genes chr3R_6_13600001 chr3R_13600001 RAL-531 1823 chr3R 13604042 13604090 chr3R 13604297 13604345 12 254 3.5 3.5 3.5 2.7 303 chr3R 13604042 intergenic not near genes chr3R 13604194 intergenic not near genes chr3R 13604345 intergenic not near genes chr3R_12_13600001 chr3R_13600001 RAL-531 1824 chr3R 13606694 13606729 chr3R 13606860 13606880 9 162 0.5 3.5 2.0 3.0 186 chr3R 13606694 intergenic CG9759 - chr3R 13606787 intergenic CG9759 - chr3R 13606880 intergenic CG9759 - chr3R_9_13605001 chr3R_13605001 RAL-531 1825 chr3R 13625671 13625723 chr3R 13625772 13625824 13 101 1.5 2.0 1.8 4.6 153 chr3R 13625671 intergenic not near genes chr3R 13625748 intergenic not near genes chr3R 13625824 intergenic not near genes chr3R_13_13625001 chr3R_13625001 RAL-531 1826 chr3R 13712622 13712651 chr3R 13712719 13712766 5 108 0.5 0.5 0.5 3.3 144 chr3R 13712622 3` UTR CR34044 - chr3R 13712694 3` UTR CR34044 - chr3R 13712766 3` UTR CR34044 - chr3R_5_13710001 chr3R_13710001 RAL-531 1827 chr3R 11988075 11988080 chr3R 13731610 13731615 5 1743535 10.5 22.0 16.2 0.3 1743540 chr3R 11988075 intron mfas - chr3R 12859845 intergenic not near genes chr3R 13731615 intron CG34383 + chr3R_5_12855001 chr3R_12855001 RAL-531 1828 chr3R 13758138 13758172 chr3R 13758233 13758278 9 105 0.0 5.0 2.5 2.6 140 chr3R 13758138 intron CG34383 + chr3R 13758208 intron CG34383 + chr3R 13758278 intron CG34383 + chr3R_9_13755001 chr3R_13755001 RAL-531 1829 chr3R 13975353 13975409 chr3R 13975452 13975509 13 94 4.5 4.0 4.2 2.5 156 chr3R 13975353 intron rdx - chr3R 13975431 intron rdx - chr3R 13975509 intron rdx - chr3R_13_13975001 chr3R_13975001 RAL-531 1830 chr3R 14014852 14014888 chr3R 14015027 14015073 16 182 1.5 3.5 2.5 4.6 221 chr3R 14014852 intron rdx - chr3R 14014962 intron rdx - chr3R 14015073 intron rdx - chr3R_16_14010001 chr3R_14010001 RAL-531 1831 chr3R 14021629 14021676 chr3R 14023466 14023513 S-element 16 1836 8.5 3.0 5.8 2.4 1884 chr3R 14021629 intron rdx - chr3R 14022571 intron rdx - chr3R 14023513 intron rdx - chr3R_16_14020001 chr3R_14020001 RAL-531 1832 chr3R 14047752 14047800 chr3R 14047863 14047910 5 111 0.0 5.0 2.5 1.4 158 chr3R 14047752 intergenic not near genes chr3R 14047831 intergenic not near genes chr3R 14047910 intergenic not near genes chr3R_5_14045001 chr3R_14045001 RAL-531 1833 chr3R 14048994 14049047 chr3R 14049094 14049147 14 93 4.5 1.5 3.0 3.5 153 chr3R 14048994 intergenic not near genes chr3R 14049070 intergenic not near genes chr3R 14049147 intergenic not near genes chr3R_14_14045001 chr3R_14045001 RAL-531 1834 chr3R 14058103 14058151 chr3R 14058243 14058291 21 139 2.5 4.0 3.2 5.0 188 chr3R 14058103 5` UTR foxo + chr3R 14058197 intron foxo + chr3R 14058291 intron foxo + chr3R_21_14055001 chr3R_14055001 RAL-531 1835 chr3R 14067125 14067155 chr3R 14067224 14067254 11 99 1.5 1.5 1.5 4.4 129 chr3R 14067125 exon foxo + chr3R 14067190 intron foxo + chr3R 14067254 intron foxo + chr3R_11_14065001 chr3R_14065001 RAL-531 1836 chr3R 14071268 14071314 chr3R 14071365 14071410 19 96 3.0 4.5 3.8 4.0 142 chr3R 14071268 intron foxo + chr3R 14071339 intron foxo + chr3R 14071410 intron foxo + chr3R_19_14070001 chr3R_14070001 RAL-531 1837 chr3R 7773344 7773344 chr3R 14104440 14104440 12 6331096 18.5 2.5 10.5 1.0 6331096 chr3R 7773344 intergenic not near genes chr3R 10938892 intergenic not near genes chr3R 14104440 intergenic CG12402 - chr3R_12_10935001 chr3R_10935001 RAL-531 1838 chr3R 14117423 14117469 chr3R 14117519 14117565 18 95 7.5 8.5 8.0 2.0 142 chr3R 14117423 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117565 intron Kif19A - chr3R_18_14115001 chr3R_14115001 RAL-531 1839 chr3R 14132426 14132448 chr3R 14132559 14132581 8 133 0.0 8.5 4.2 1.5 155 chr3R 14132426 intergenic CG14356 - chr3R 14132504 intergenic CG14356 - chr3R 14132581 intergenic not near genes chr3R_8_14130001 chr3R_14130001 RAL-531 1840 chr3R 14180792 14180829 chr3R 14185577 14185595 F-element 13 4780 4.5 3.5 4.0 2.6 4803 chr3R 14180792 intron Dop1R1 - chr3R 14183194 intron Dop1R1 - chr3R 14185595 intron Dop1R1 - chr3R_13_14180001 chr3R_14180001 RAL-531 1841 chr3R 14194416 14194457 chr3R 14203579 14203626 roo 17 9164 6.0 6.0 6.0 2.4 9210 chr3R 14194416 intron Dop1R1 - chr3R 14199021 intron Dop1R1 - chr3R 14203626 intron Dop1R1 - chr3R_17_14195001 chr3R_14195001 RAL-531 1842 chr3R 14319051 14319095 chr3R 14319143 14319175 12 92 2.5 2.5 2.5 3.4 124 chr3R 14319051 3` UTR pr-set7 + chr3R 14319113 3` UTR pr-set7 + chr3R 14319175 3` UTR pr-set7 + chr3R_12_14315001 chr3R_14315001 RAL-531 1843 chr3R 14440703 14440755 chr3R 14440799 14440851 12 96 3.0 1.5 2.2 3.8 148 chr3R 14440703 intron cv-c - chr3R 14440777 intron cv-c - chr3R 14440851 intron cv-c - chr3R_12_14440001 chr3R_14440001 RAL-531 1844 chr3R 14482391 14482413 chr3R 14482477 14482515 4 98 4.5 3.0 3.8 0.8 124 chr3R 14482391 intergenic not near genes chr3R 14482453 intergenic not near genes chr3R 14482515 intergenic not near genes chr3R_4_14480001 chr3R_14480001 RAL-531 1845 chr3R 14546038 14546072 chr3R 14546123 14546169 5 94 4.0 0.5 2.2 1.6 131 chr3R 14546038 intron Pde6 - chr3R 14546104 intron Pde6 - chr3R 14546169 intron Pde6 - chr3R_5_14545001 chr3R_14545001 RAL-531 1846 chr3R 14556575 14556584 chr3R 14556678 14556687 4 102 4.0 4.5 4.2 0.8 112 chr3R 14556575 intron Pde6 - chr3R 14556631 intron Pde6 - chr3R 14556687 intron Pde6 - chr3R_4_14555001 chr3R_14555001 RAL-531 1847 chr3R 14560640 14560691 chr3R 14560855 14560906 15 213 0.5 1.5 1.0 7.5 266 chr3R 14560640 intergenic CG14850 + chr3R 14560773 intergenic CG14850 + chr3R 14560906 intergenic CG14850 + chr3R_15_14560001 chr3R_14560001 RAL-531 1848 chr3R 14688104 14688147 chr3R 14688205 14688248 8 101 6.0 0.0 3.0 2.0 144 chr3R 14688104 intron Meltrin - chr3R 14688176 intron Meltrin - chr3R 14688248 intron Meltrin - chr3R_8_14685001 chr3R_14685001 RAL-531 1849 chr3R 14704364 14704417 chr3R 14704460 14704513 11 92 4.5 2.5 3.5 2.4 149 chr3R 14704364 intron kibra - chr3R 14704438 intron kibra - chr3R 14704513 intron kibra - chr3R_11_14700001 chr3R_14700001 RAL-531 1850 chr3R 14738175 14738216 chr3R 14738419 14738460 12 242 0.5 2.5 1.5 4.8 285 chr3R 14738175 intron eff - chr3R 14738318 intron eff - chr3R 14738460 intron eff - chr3R_12_14735001 chr3R_14735001 RAL-531 1851 chr3R 14973567 14973612 chr3R 14974076 14974121 4 508 4.5 4.0 4.2 0.8 554 chr3R 14973567 intergenic not near genes chr3R 14973844 intergenic not near genes chr3R 14974121 intergenic not near genes chr3R_4_14970001 chr3R_14970001 RAL-531 1852 chr3R 15026319 15026341 chr3R 15026424 15026447 5 105 1.5 2.0 1.8 1.8 128 chr3R 15026319 intergenic not near genes chr3R 15026383 intergenic not near genes chr3R 15026447 intergenic not near genes chr3R_5_15025001 chr3R_15025001 RAL-531 1853 chr3R 15032454 15032463 chr3R 15032561 15032570 8 107 0.0 1.5 0.8 4.4 116 chr3R 15032454 intergenic not near genes chr3R 15032512 intergenic not near genes chr3R 15032570 intergenic not near genes chr3R_8_15030001 chr3R_15030001 RAL-531 1854 chr3R 15041409 15041454 chr3R 15045197 15045237 Doc 12 3787 1.0 7.5 4.2 2.3 3828 chr3R 15041409 intergenic not near genes chr3R 15043323 intergenic not near genes chr3R 15045237 intergenic not near genes chr3R_12_15040001 chr3R_15040001 RAL-531 1855 chr3R 15061018 15061030 chr3R 15061119 15061131 5 101 2.0 1.5 1.8 1.8 113 chr3R 15061018 intron dpr9 - chr3R 15061074 intron dpr9 - chr3R 15061131 intron dpr9 - chr3R_5_15060001 chr3R_15060001 RAL-531 1856 chr3R 15079793 15079820 chr3R 15080054 15080081 pogo 7 261 10.5 5.5 8.0 0.8 288 chr3R 15079793 3` UTR CG6966 - chr3R 15079937 3` UTR CG6966 - chr3R 15080081 3` UTR CG6966 - chr3R_7_15075001 chr3R_15075001 RAL-531 1857 chr3R 15079822 15079835 chr3R 15080047 15080096 pogo 8 256 4.5 5.5 5.0 1.3 274 chr3R 15079822 3` UTR CG6966 - chr3R 15079959 3` UTR CG6966 - chr3R 15080096 3` UTR CG6966 - chr3R_8_15075001 chr3R_15075001 RAL-531 1858 chr3R 15087722 15087761 chr3R 15087826 15087846 10 100 2.0 0.5 1.2 4.5 124 chr3R 15087722 intron CG6966 - chr3R 15087784 intron CG6966 - chr3R 15087846 intron CG6966 - chr3R_10_15085001 chr3R_15085001 RAL-531 1859 chr3R 15102475 15102528 chr3R 15109754 15109803 412 13 7277 1.5 5.0 3.2 3.1 7328 chr3R 15102475 intron CG42788 - chr3R 15106139 intron CG42788 - chr3R 15109803 intron CG42788 - chr3R_13_15105001 chr3R_15105001 RAL-531 1860 chr3R 15114893 15114937 chr3R 15114990 15114996 10 93 5.0 5.5 5.2 1.6 103 chr3R 15114893 intron CG42788 - chr3R 15114944 intron CG42788 - chr3R 15114996 intron CG42788 - chr3R_10_15110001 chr3R_15110001 RAL-531 1861 chr3R 15127760 15127811 chr3R 15127860 15127911 12 100 4.0 4.0 4.0 2.4 151 chr3R 15127760 intron CG42788 - chr3R 15127836 intron CG42788 - chr3R 15127911 intron CG42788 - chr3R_12_15125001 chr3R_15125001 RAL-531 1862 chr3R 15132052 15132075 chr3R 15135132 15135135 Juan 7 3076 4.0 14.0 9.0 0.7 3083 chr3R 15132052 intergenic CG42788 - chr3R 15133594 intergenic not near genes chr3R 15135135 intergenic CG6912 - chr3R_7_15130001 chr3R_15130001 RAL-531 1863 chr3R 15445890 15445905 chr3R 15445995 15446010 5 105 2.0 0.0 1.0 2.5 120 chr3R 15445890 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446010 intron AdamTS-A - chr3R_5_15445001 chr3R_15445001 RAL-531 1864 chr3R 15592873 15592918 chr3R 15592974 15593022 13 102 4.0 3.0 3.5 2.9 149 chr3R 15592873 intergenic not near genes chr3R 15592948 intergenic not near genes chr3R 15593022 intergenic not near genes chr3R_13_15590001 chr3R_15590001 RAL-531 1865 chr3R 15594654 15594672 chr3R 15594742 15594774 7 98 0.0 3.0 1.5 2.8 120 chr3R 15594654 intergenic not near genes chr3R 15594714 intergenic not near genes chr3R 15594774 intergenic not near genes chr3R_7_15590001 chr3R_15590001 RAL-531 1866 chr3R 15601160 15601195 chr3R 15608687 15608731 412 8 7537 3.5 5.0 4.2 1.5 7571 chr3R 15601160 intergenic not near genes chr3R 15604946 intergenic not near genes chr3R 15608731 intergenic not near genes chr3R_8_15600001 chr3R_15600001 RAL-531 1867 chr3R 15618734 15618763 chr3R 15626226 15626255 blood 7 7493 0.5 7.0 3.8 1.5 7521 chr3R 15618734 intergenic not near genes chr3R 15622494 intergenic not near genes chr3R 15626255 intergenic not near genes chr3R_7_15620001 chr3R_15620001 RAL-531 1868 chr3R 15646772 15646800 chr3R 15646875 15646903 8 103 3.0 2.5 2.8 2.1 131 chr3R 15646772 intergenic not near genes chr3R 15646838 intergenic not near genes chr3R 15646903 intergenic not near genes chr3R_8_15645001 chr3R_15645001 RAL-531 1869 chr3R 15735222 15735235 chr3R 15739962 15739975 F-element 5 4740 1.5 4.5 3.0 1.2 4753 chr3R 15735222 intergenic not near genes chr3R 15737598 intergenic not near genes chr3R 15739975 intergenic not near genes chr3R_5_15735001 chr3R_15735001 RAL-531 1870 chr3R 15781681 15781730 chr3R 15781826 15781875 17 142 2.0 3.5 2.8 4.5 194 chr3R 15781681 intergenic not near genes chr3R 15781778 intergenic not near genes chr3R 15781875 intergenic not near genes chr3R_17_15780001 chr3R_15780001 RAL-531 1871 chr3R 15878077 15878096 chr3R 15878178 15878203 9 107 4.5 4.5 4.5 1.6 126 chr3R 15878077 intergenic not near genes chr3R 15878140 intergenic not near genes chr3R 15878203 intergenic not near genes chr3R_9_15875001 chr3R_15875001 RAL-531 1872 chr3R 15892642 15892687 chr3R 15892743 15892788 11 100 3.5 4.5 4.0 2.2 146 chr3R 15892642 intron CG14877 - chr3R 15892715 intron CG14877 - chr3R 15892788 intron CG14877 - chr3R_11_15890001 chr3R_15890001 RAL-531 1873 chr3R 16033407 16033431 chr3R 16033508 16033532 9 101 5.0 3.5 4.2 1.7 125 chr3R 16033407 intron pnr + chr3R 16033470 intron pnr + chr3R 16033532 intron pnr + chr3R_9_16030001 chr3R_16030001 RAL-531 1874 chr3R 16225067 16225119 chr3R 16225172 16225224 21 104 2.5 3.5 3.0 5.2 157 chr3R 16225067 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225224 intergenic tara + chr3R_21_16225001 chr3R_16225001 RAL-531 1875 chr3R 16374282 16374331 chr3R 16374419 16374468 19 135 3.0 5.0 4.0 3.8 186 chr3R 16374282 intergenic ss - chr3R 16374375 intergenic ss - chr3R 16374468 3` UTR ss - chr3R_19_16370001 chr3R_16370001 RAL-531 1876 chr3R 16708677 16708724 chr3R 16708778 16708821 13 100 6.5 3.0 4.8 2.2 144 chr3R 16708677 intron Ubx - chr3R 16708749 intron Ubx - chr3R 16708821 intron Ubx - chr3R_13_16705001 chr3R_16705001 RAL-531 1877 chr3R 16756304 16756343 chr3R 16762515 16762528 diver 5 6198 3.5 0.5 2.0 1.7 6224 chr3R 16756304 intron bxd - chr3R 16759416 intron bxd - chr3R 16762528 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-531 1878 chr3R 16771609 16771632 chr3R 16771705 16771714 4 92 3.5 3.5 3.5 0.9 105 chr3R 16771609 intron bxd - chr3R 16771662 intron bxd - chr3R 16771714 intron bxd - chr3R_4_16770001 chr3R_16770001 RAL-531 1879 chr3R 16771633 16771645 chr3R 16771693 16771741 6 81 2.0 3.5 2.8 1.6 108 chr3R 16771633 intron bxd - chr3R 16771687 intron bxd - chr3R 16771741 intron bxd - chr3R_6_16770001 chr3R_16770001 RAL-531 1880 chr3R 16836951 16836981 chr3R 16837293 16837330 6 347 1.5 3.0 2.2 1.9 379 chr3R 16836951 intron iab-8 - chr3R 16837140 intron iab-8 - chr3R 16837330 intron iab-8 - chr3R_6_16835001 chr3R_16835001 RAL-531 1881 chr3R 17012957 17012983 chr3R 17013039 17013054 13 85 4.5 6.0 5.2 2.1 97 chr3R 17012957 intergenic CG8907 + chr3R 17013006 intergenic CG8907 + chr3R 17013054 intergenic not near genes chr3R_13_17010001 chr3R_17010001 RAL-531 1882 chr3R 17066768 17066812 chr3R 17066871 17066906 5 100 0.0 0.0 0.0 5.0 138 chr3R 17066768 intron Dad + chr3R 17066837 intron Dad + chr3R 17066906 intron Dad + chr3R_5_17065001 chr3R_17065001 RAL-531 1883 chr3R 17121501 17121556 chr3R 17121716 17121771 15 214 3.5 3.5 3.5 3.3 270 chr3R 17121501 intron cher - chr3R 17121636 intron,exon cher -,CG42779 + chr3R 17121771 intron,exon cher -,CG42779 + chr3R_15_17120001 chr3R_17120001 RAL-531 1884 chr3R 17129152 17129163 chr3R 17129254 17129265 6 102 5.5 0.5 3.0 1.5 113 chr3R 17129152 intergenic CG31265 +,CG17475 - chr3R 17129208 intergenic CG31265 +,CG17475 - chr3R 17129265 intergenic CG17475 -,CG31265 + chr3R_6_17125001 chr3R_17125001 RAL-531 1885 chr3R 17169428 17169472 chr3R 17169519 17169569 14 96 6.0 4.5 5.2 2.3 141 chr3R 17169428 intron Mur89F - chr3R 17169498 intron Mur89F - chr3R 17169569 intron Mur89F - chr3R_14_17165001 chr3R_17165001 RAL-531 1886 chr3R 17175945 17175965 chr3R 17176045 17176064 5 99 9.0 3.0 6.0 0.7 119 chr3R 17175945 intron Mur89F - chr3R 17176004 intron Mur89F - chr3R 17176064 intron Mur89F - chr3R_5_17175001 chr3R_17175001 RAL-531 1887 chr3R 17176670 17176680 chr3R 17176762 17176778 8 109 3.0 2.0 2.5 2.3 108 chr3R 17176670 intron Mur89F - chr3R 17176724 intron Mur89F - chr3R 17176778 intron Mur89F - chr3R_8_17175001 chr3R_17175001 RAL-531 1888 chr3R 17184721 17184757 chr3R 17184817 17184853 17 96 3.0 3.0 3.0 4.2 132 chr3R 17184721 intron Mur89F - chr3R 17184787 intron Mur89F - chr3R 17184853 intron Mur89F - chr3R_17_17180001 chr3R_17180001 RAL-531 1889 chr3R 17290423 17290471 chr3R 17290529 17290577 12 106 1.5 1.0 1.2 5.5 154 chr3R 17290423 intergenic not near genes chr3R 17290500 intergenic not near genes chr3R 17290577 intergenic not near genes chr3R_12_17290001 chr3R_17290001 RAL-531 1890 chr3R 17294651 17294698 chr3R 17295099 17295135 BS 18 446 1.0 5.5 3.2 4.3 484 chr3R 17294651 intergenic not near genes chr3R 17294893 intergenic not near genes chr3R 17295135 intergenic not near genes chr3R_18_17290001 chr3R_17290001 RAL-531 1891 chr3R 17316259 17316295 chr3R 17316425 17316460 4 164 2.5 0.5 1.5 1.6 201 chr3R 17316259 intergenic not near genes chr3R 17316360 intergenic not near genes chr3R 17316460 intergenic not near genes chr3R_4_17315001 chr3R_17315001 RAL-531 1892 chr3R 17346669 17346716 chr3R 17348252 17348296 F-element 8 1583 1.5 2.0 1.8 2.9 1627 chr3R 17346669 intron beat-IIa - chr3R 17347482 intron beat-IIa - chr3R 17348296 intron beat-IIa - chr3R_8_17345001 chr3R_17345001 RAL-531 1893 chr3R 17355493 17355509 chr3R 17355579 17355606 5 88 5.5 6.0 5.8 0.7 113 chr3R 17355493 intron beat-IIa - chr3R 17355550 intron beat-IIa - chr3R 17355606 intron beat-IIa - chr3R_5_17355001 chr3R_17355001 RAL-531 1894 chr3R 17461179 17461227 chr3R 17461281 17461327 12 98 4.0 3.0 3.5 2.7 148 chr3R 17461179 intergenic not near genes chr3R 17461253 intergenic not near genes chr3R 17461327 intergenic not near genes chr3R_12_17460001 chr3R_17460001 RAL-531 1895 chr3R 17497943 17497992 chr3R 17498049 17498098 11 105 3.0 2.0 2.5 3.1 155 chr3R 17497943 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498098 intron Dscam3 - chr3R_11_17495001 chr3R_17495001 RAL-531 1896 chr3R 17507437 17507466 chr3R 17507535 17507564 10 98 6.5 8.0 7.2 1.2 127 chr3R 17507437 intergenic not near genes chr3R 17507500 intergenic not near genes chr3R 17507564 intergenic not near genes chr3R_10_17505001 chr3R_17505001 RAL-531 1897 chr3R 17525271 17525308 chr3R 17525380 17525417 10 107 5.5 6.0 5.8 1.5 146 chr3R 17525271 intergenic not near genes chr3R 17525344 intergenic not near genes chr3R 17525417 intergenic not near genes chr3R_10_17525001 chr3R_17525001 RAL-531 1898 chr3R 17591270 17591321 chr3R 17591721 17591760 F-element 4 444 3.0 6.0 4.5 0.7 490 chr3R 17591270 intergenic not near genes chr3R 17591515 intergenic not near genes chr3R 17591760 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-531 1899 chr3R 17603437 17603491 chr3R 17603541 17603589 13 102 3.5 5.0 4.2 2.5 152 chr3R 17603437 intergenic not near genes chr3R 17603513 intergenic not near genes chr3R 17603589 intergenic not near genes chr3R_13_17600001 chr3R_17600001 RAL-531 1900 chr3R 17638298 17638347 chr3R 17638804 17638853 roo 23 506 7.0 4.5 5.8 3.4 555 chr3R 17638298 intron CG43175 + chr3R 17638576 intron CG43175 + chr3R 17638853 intron,intron CG43175 +,CR45222 + chr3R_23_17635001 chr3R_17635001 RAL-531 1901 chr3R 17645682 17645713 chr3R 17645832 17645863 12 150 5.0 1.0 3.0 3.0 181 chr3R 17645682 intergenic CG43175 + chr3R 17645772 intergenic not near genes chr3R 17645863 intergenic not near genes chr3R_12_17645001 chr3R_17645001 RAL-531 1902 chr3R 17655436 17655481 chr3R 17655551 17655596 6 115 1.0 5.0 3.0 1.5 160 chr3R 17655436 intron CG14322 + chr3R 17655516 intron CG14322 + chr3R 17655596 intron CG14322 + chr3R_6_17655001 chr3R_17655001 RAL-531 1903 chr3R 17725055 17725077 chr3R 17725169 17725174 9 110 2.0 0.5 1.2 4.1 119 chr3R 17725055 intergenic Atg8b - chr3R 17725114 intergenic Atg8b - chr3R 17725174 intergenic Atg8b - chr3R_9_17725001 chr3R_17725001 RAL-531 1904 chr3R 17743202 17743226 chr3R 17743303 17743327 13 100 5.5 4.0 4.8 2.2 125 chr3R 17743202 intron TyrRII + chr3R 17743264 intron TyrRII + chr3R 17743327 intron TyrRII + chr3R_13_17740001 chr3R_17740001 RAL-531 1905 chr3R 17773359 17773387 chr3R 17773474 17773487 8 111 2.5 4.0 3.2 1.9 128 chr3R 17773359 exon CG43102 - chr3R 17773423 intron CG43102 - chr3R 17773487 exon CG43102 - chr3R_8_17770001 chr3R_17770001 RAL-531 1906 chr3R 17811177 17811207 chr3R 17811277 17811307 9 98 5.0 0.0 2.5 2.6 130 chr3R 17811177 intergenic CG18012 -,tinc + chr3R 17811242 intergenic CG18012 -,tinc + chr3R 17811307 intergenic CG18012 -,tinc + chr3R_9_17810001 chr3R_17810001 RAL-531 1907 chr3R 17823188 17823220 chr3R 17823293 17823325 8 104 5.5 2.0 3.8 1.7 137 chr3R 17823188 intron tinc + chr3R 17823256 intron tinc + chr3R 17823325 intron tinc + chr3R_8_17820001 chr3R_17820001 RAL-531 1908 chr3R 17845206 17845220 chr3R 17845264 17845288 6 68 3.0 6.0 4.5 1.1 82 chr3R 17845206 intron tinc + chr3R 17845247 intron tinc + chr3R 17845288 intron tinc + chr3R_6_17845001 chr3R_17845001 RAL-531 1909 chr3R 17888780 17888827 chr3R 17888884 17888913 15 97 2.0 3.5 2.8 3.9 133 chr3R 17888780 intron Rim - chr3R 17888846 intron Rim - chr3R 17888913 intron Rim - chr3R_15_17885001 chr3R_17885001 RAL-531 1910 chr3R 17899069 17899083 chr3R 17899167 17899181 5 98 9.0 4.0 6.5 0.7 112 chr3R 17899069 intron Rim - chr3R 17899125 intron Rim - chr3R 17899181 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-531 1911 chr3R 17925837 17925877 chr3R 17927323 17927326 hobo 9 1479 4.5 3.0 3.8 1.9 1489 chr3R 17925837 intron cpo + chr3R 17926582 intron cpo + chr3R 17927326 intron cpo + chr3R_9_17925001 chr3R_17925001 RAL-531 1912 chr3R 17976510 17976523 chr3R 17976607 17976620 8 97 3.0 6.0 4.5 1.5 110 chr3R 17976510 intron cpo + chr3R 17976565 intron cpo + chr3R 17976620 intron cpo + chr3R_8_17975001 chr3R_17975001 RAL-531 1913 chr3R 18030463 18030479 chr3R 18030567 18030583 4 104 2.0 5.5 3.8 0.8 120 chr3R 18030463 intergenic not near genes chr3R 18030523 intergenic not near genes chr3R 18030583 intergenic not near genes chr3R_4_18030001 chr3R_18030001 RAL-531 1914 chr3R 18061423 18061446 chr3R 18061535 18061558 7 112 4.0 0.0 2.0 2.3 135 chr3R 18061423 intergenic not near genes chr3R 18061490 intergenic not near genes chr3R 18061558 intergenic not near genes chr3R_7_18060001 chr3R_18060001 RAL-531 1915 chr3R 18061556 18061616 chr3R 18063150 18063204 F-element 5 1589 0.0 0.0 0.0 5.0 1648 chr3R 18061556 intergenic not near genes chr3R 18062380 intergenic not near genes chr3R 18063204 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-531 1916 chr3R 18112343 18112393 chr3R 18112469 18112519 14 126 1.0 3.5 2.2 4.4 176 chr3R 18112343 intron sr + chr3R 18112431 intron sr + chr3R 18112519 intron sr + chr3R_14_18110001 chr3R_18110001 RAL-531 1917 chr3R 18122881 18122916 chr3R 18122978 18123013 8 97 3.5 6.0 4.8 1.4 132 chr3R 18122881 intron sr + chr3R 18122947 intron sr + chr3R 18123013 intron sr + chr3R_8_18120001 chr3R_18120001 RAL-531 1918 chr3R 18143540 18143590 chr3R 18143649 18143699 15 109 5.5 4.5 5.0 2.5 159 chr3R 18143540 intergenic not near genes chr3R 18143620 intergenic not near genes chr3R 18143699 intergenic not near genes chr3R_15_18140001 chr3R_18140001 RAL-531 1919 chr3R 18302978 18302986 chr3R 18303103 18303111 4 125 3.0 0.0 1.5 1.6 133 chr3R 18302978 intergenic CG7126 -,PKD - chr3R 18303044 intergenic CG7126 -,PKD - chr3R 18303111 intergenic PKD -,CG7126 - chr3R_4_18300001 chr3R_18300001 RAL-531 1920 chr3R 18331762 18331771 chr3R 18333275 18333285 hopper2 6 1514 18.5 3.0 10.8 0.5 1523 chr3R 18331762 3` UTR CG15803 - chr3R 18332524 intron CG15803 - chr3R 18333285 3` UTR CG15803 - chr3R_6_18330001 chr3R_18330001 RAL-531 1921 chr3R 18352557 18352608 chr3R 18352670 18352721 12 112 4.0 2.5 3.2 2.9 164 chr3R 18352557 intron CG15803 - chr3R 18352639 intron CG15803 - chr3R 18352721 intron CG15803 - chr3R_12_18350001 chr3R_18350001 RAL-531 1922 chr3R 18473226 18473251 chr3R 18473333 18473358 10 106 0.0 7.0 3.5 2.2 132 chr3R 18473226 intron fru - chr3R 18473292 intron fru - chr3R 18473358 intron fru - chr3R_10_18470001 chr3R_18470001 RAL-531 1923 chr3R 18498169 18498182 chr3R 18498265 18498278 4 96 1.0 4.0 2.5 1.1 109 chr3R 18498169 intron fru - chr3R 18498224 intron fru - chr3R 18498278 intron fru - chr3R_4_18495001 chr3R_18495001 RAL-531 1924 chr3R 18500722 18500737 chr3R 18500863 18500873 6 140 3.5 3.5 3.5 1.3 151 chr3R 18500722 intron fru - chr3R 18500798 intron fru - chr3R 18500873 intron fru - chr3R_6_18500001 chr3R_18500001 RAL-531 1925 chr3R 18501578 18501621 chr3R 18501679 18501722 16 100 3.5 5.5 4.5 2.9 144 chr3R 18501578 intron fru - chr3R 18501650 intron fru - chr3R 18501722 intron fru - chr3R_16_18500001 chr3R_18500001 RAL-531 1926 chr3R 18538519 18538555 chr3R 18538626 18538661 9 106 3.5 4.0 3.8 1.9 142 chr3R 18538519 intron fru - chr3R 18538590 intron fru - chr3R 18538661 intron fru - chr3R_9_18535001 chr3R_18535001 RAL-531 1927 chr3R 18568550 18568585 chr3R 18568647 18568679 7 99 2.0 1.5 1.8 2.5 129 chr3R 18568550 intergenic not near genes chr3R 18568614 intergenic not near genes chr3R 18568679 intergenic not near genes chr3R_7_18565001 chr3R_18565001 RAL-531 1928 chr3R 18606488 18606529 chr3R 18610740 18610781 F-element 15 4252 5.0 7.5 6.2 2.1 4293 chr3R 18606488 intron,intron qin +,CG14304 - chr3R 18608634 intron,intron qin +,CG14304 - chr3R 18610781 intron,intron qin +,CG14304 - chr3R_15_18605001 chr3R_18605001 RAL-531 1929 chr3R 18617695 18617745 chr3R 18617795 18617845 19 100 1.5 7.0 4.2 3.7 150 chr3R 18617695 intron,intron qin +,CG14304 - chr3R 18617770 intron,intron qin +,CG14304 - chr3R 18617845 intron,intron qin +,CG14304 - chr3R_19_18615001 chr3R_18615001 RAL-531 1930 chr3R 18628856 18629020 chr3R 18628999 18629130 10 129 0.0 0.0 0.0 10.0 274 chr3R 18628856 intron qin + chr3R 18628993 intron qin + chr3R 18629130 intron qin + chr3R_10_18625001 chr3R_18625001 RAL-531 1931 chr3R 18695743 18695757 chr3R 18695847 18695853 5 101 6.5 0.0 3.2 1.2 110 chr3R 18695743 3` UTR CG34282 + chr3R 18695798 intergenic CG34282 + chr3R 18695853 intergenic CG34282 + chr3R_5_18695001 chr3R_18695001 RAL-531 1932 chr3R 18703263 18703284 chr3R 18703391 18703412 8 127 7.0 0.0 3.5 1.8 149 chr3R 18703263 intergenic not near genes chr3R 18703338 intergenic not near genes chr3R 18703412 intergenic not near genes chr3R_8_18700001 chr3R_18700001 RAL-531 1933 chr3R 18720287 18720342 chr3R 18720403 18720457 9 111 1.5 2.5 2.0 3.0 170 chr3R 18720287 intron Cha + chr3R 18720372 intron Cha + chr3R 18720457 intron Cha + chr3R_9_18720001 chr3R_18720001 RAL-531 1934 chr3R 18763614 18763627 chr3R 18763851 18763885 8 249 0.5 3.0 1.8 2.9 271 chr3R 18763614 intron CG7720 - chr3R 18763750 intron CG7720 - chr3R 18763885 intron CG7720 - chr3R_8_18760001 chr3R_18760001 RAL-531 1935 chr3R 18792800 18792827 chr3R 18792902 18792930 6 103 3.0 0.0 1.5 2.4 130 chr3R 18792800 intron CG7720 - chr3R 18792865 intron CG7720 - chr3R 18792930 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-531 1936 chr3R 18807310 18807335 chr3R 18807407 18807431 5 97 0.0 0.0 0.0 5.0 121 chr3R 18807310 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807431 intron CG18208 - chr3R_5_18805001 chr3R_18805001 RAL-531 1937 chr3R 18850829 18850878 chr3R 18850933 18850983 11 103 3.5 0.5 2.0 3.7 154 chr3R 18850829 intergenic CR45633 -,CG31226 - chr3R 18850906 intergenic CR45633 -,CG31226 - chr3R 18850983 3` UTR CR45633 - chr3R_11_18850001 chr3R_18850001 RAL-531 1938 chr3R 18862577 18862611 chr3R 18862682 18862716 8 105 0.0 3.0 1.5 3.2 139 chr3R 18862577 intergenic not near genes chr3R 18862646 intergenic not near genes chr3R 18862716 intergenic not near genes chr3R_8_18860001 chr3R_18860001 RAL-531 1939 chr3R 18877999 18878033 chr3R 18878137 18878178 6 144 1.0 3.5 2.2 1.9 179 chr3R 18877999 intergenic not near genes chr3R 18878088 intergenic not near genes chr3R 18878178 intergenic not near genes chr3R_6_18875001 chr3R_18875001 RAL-531 1940 chr3R 18887597 18887599 chr3R 18887685 18887689 4 95 4.5 6.0 5.2 0.6 92 chr3R 18887597 intergenic not near genes chr3R 18887643 intergenic not near genes chr3R 18887689 intergenic not near genes chr3R_4_18885001 chr3R_18885001 RAL-531 1941 chr3R 18897607 18897610 chr3R 18897703 18897706 4 96 0.5 1.5 1.0 2.0 99 chr3R 18897607 intergenic not near genes chr3R 18897656 intergenic CG14297 + chr3R 18897706 intergenic CG14297 + chr3R_4_18895001 chr3R_18895001 RAL-531 1942 chr3R 19012999 19013050 chr3R 19013103 19013153 10 102 3.5 1.0 2.2 3.1 154 chr3R 19012999 intron gukh + chr3R 19013076 intron gukh + chr3R 19013153 intron gukh + chr3R_10_19010001 chr3R_19010001 RAL-531 1943 chr3R 19018503 19018528 chr3R 19018592 19018631 4 96 0.0 2.5 1.2 1.8 128 chr3R 19018503 intron gukh + chr3R 19018567 intron gukh + chr3R 19018631 intron gukh + chr3R_4_19015001 chr3R_19015001 RAL-531 1944 chr3R 19207398 19207416 chr3R 19207479 19207490 6 91 5.0 3.5 4.2 1.2 92 chr3R 19207398 intergenic not near genes chr3R 19207444 intergenic not near genes chr3R 19207490 intergenic not near genes chr3R_6_19205001 chr3R_19205001 RAL-531 1945 chr3R 19276910 19276946 chr3R 19277010 19277046 11 100 6.5 6.0 6.2 1.5 136 chr3R 19276910 intergenic not near genes chr3R 19276978 intergenic not near genes chr3R 19277046 intergenic not near genes chr3R_11_19275001 chr3R_19275001 RAL-531 1946 chr3R 19335890 19335899 chr3R 19335994 19335994 4 98 3.0 1.5 2.2 1.2 104 chr3R 19335890 intergenic not near genes chr3R 19335942 intergenic not near genes chr3R 19335994 intergenic not near genes chr3R_4_19335001 chr3R_19335001 RAL-531 1947 chr3R 19335900 19335930 chr3R 19335986 19336035 5 100 2.0 1.0 1.5 2.0 135 chr3R 19335900 intergenic not near genes chr3R 19335968 intergenic not near genes chr3R 19336035 intergenic not near genes chr3R_5_19335001 chr3R_19335001 RAL-531 1948 chr3R 19340376 19340421 chr3R 19340473 19340518 13 96 4.5 6.5 5.5 2.0 142 chr3R 19340376 intergenic not near genes chr3R 19340447 intergenic not near genes chr3R 19340518 intergenic not near genes chr3R_13_19340001 chr3R_19340001 RAL-531 1949 chr3R 19344653 19344693 chr3R 19344808 19344848 13 153 5.5 1.0 3.2 3.1 195 chr3R 19344653 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344848 intergenic not near genes chr3R_13_19340001 chr3R_19340001 RAL-531 1950 chr3R 19418413 19418440 chr3R 19418525 19418527 8 109 3.0 0.5 1.8 2.9 114 chr3R 19418413 intron CG31221 + chr3R 19418470 intron CG31221 + chr3R 19418527 intron CG31221 + chr3R_8_19415001 chr3R_19415001 RAL-531 1951 chr3R 19453836 19453873 chr3R 19454005 19454043 10 166 3.0 1.5 2.2 3.1 207 chr3R 19453836 intron CG31221 + chr3R 19453940 intron CG31221 + chr3R 19454043 intron CG31221 + chr3R_10_19450001 chr3R_19450001 RAL-531 1952 chr3R 19475243 19475273 chr3R 19475777 19475821 4 545 3.0 4.5 3.8 0.8 578 chr3R 19475243 intron Dys + chr3R 19475532 intron Dys + chr3R 19475821 intron Dys + chr3R_4_19475001 chr3R_19475001 RAL-531 1953 chr3R 19494393 19494410 chr3R 19494493 19494509 9 100 5.0 6.5 5.8 1.3 116 chr3R 19494393 intron Dys + chr3R 19494451 intron Dys + chr3R 19494509 intron Dys + chr3R_9_19490001 chr3R_19490001 RAL-531 1954 chr3R 19569463 19569510 chr3R 19577446 19577493 11 7985 28.5 27.5 28.0 0.4 8030 chr3R 19569463 intron Dys + chr3R 19573478 intron Dys + chr3R 19577493 intron Dys + chr3R_11_19570001 chr3R_19570001 RAL-531 1955 chr3R 19581625 19581657 chr3R 19581724 19581743 5 93 3.0 0.0 1.5 2.0 118 chr3R 19581625 intron Dys + chr3R 19581684 intron Dys + chr3R 19581743 intron Dys + chr3R_5_19580001 chr3R_19580001 RAL-531 1956 chr3R 19633273 19633313 chr3R 19633379 19633419 7 105 1.0 4.5 2.8 1.8 146 chr3R 19633273 intergenic subdued - chr3R 19633346 intergenic subdued - chr3R 19633419 3` UTR subdued - chr3R_7_19630001 chr3R_19630001 RAL-531 1957 chr3R 19651726 19651754 chr3R 19651818 19651849 10 95 2.5 7.0 4.8 1.7 123 chr3R 19651726 exon CG31219 + chr3R 19651788 exon CG31219 + chr3R 19651849 intron CG31219 + chr3R_10_19650001 chr3R_19650001 RAL-531 1958 chr3R 19702305 19702337 chr3R 19702407 19702439 10 99 5.0 3.5 4.2 1.9 134 chr3R 19702305 intergenic not near genes chr3R 19702372 intergenic not near genes chr3R 19702439 intergenic not near genes chr3R_10_19700001 chr3R_19700001 RAL-531 1959 chr3R 19716198 19716226 chr3R 19716295 19716323 4 97 3.0 0.0 1.5 1.6 125 chr3R 19716198 intergenic CG34286 - chr3R 19716260 intergenic CG34286 - chr3R 19716323 intergenic CG34286 - chr3R_4_19715001 chr3R_19715001 RAL-531 1960 chr3R 19774053 19774271 chr3R 19778025 19778211 4 3948 9.0 5.5 7.2 0.5 4158 chr3R 19774053 intron GluClalpha + chr3R 19776132 exon CG11659 - chr3R 19778211 intergenic not near genes chr3R_4_19775001 chr3R_19775001 RAL-531 1961 chr3R 19783012 19783042 chr3R 19783149 19783179 8 137 5.0 7.5 6.2 1.1 167 chr3R 19783012 exon CG11407 + chr3R 19783096 3` UTR CG11407 + chr3R 19783179 intergenic CG11407 +,CG11453 + chr3R_8_19780001 chr3R_19780001 RAL-531 1962 chr3R 19846953 19846969 chr3R 19847133 19847133 4 174 6.5 1.5 4.0 0.8 180 chr3R 19846953 intergenic CG4662 + chr3R 19847043 intergenic CG4662 + chr3R 19847133 intergenic CG4662 + chr3R_4_19845001 chr3R_19845001 RAL-531 1963 chr3R 19908282 19908303 chr3R 19908386 19908407 5 104 0.0 2.0 1.0 2.5 125 chr3R 19908282 intron RhoGAP92B + chr3R 19908344 intron RhoGAP92B + chr3R 19908407 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_5_19905001 chr3R_19905001 RAL-531 1964 chr3R 19952428 19952447 chr3R 19954206 19954243 6 1788 24.0 12.0 18.0 0.3 1815 chr3R 19952428 intron Hs6st - chr3R 19953336 intron Hs6st - chr3R 19954243 intron Hs6st - chr3R_6_19950001 chr3R_19950001 RAL-531 1965 chr3R 19981442 19981452 chr3R 19981542 19981552 5 100 0.0 4.5 2.2 1.6 110 chr3R 19981442 intron Hs6st - chr3R 19981497 intron Hs6st - chr3R 19981552 intron Hs6st - chr3R_5_19980001 chr3R_19980001 RAL-531 1966 chr3R 20008801 20008853 chr3R 20008902 20008952 13 96 6.0 2.5 4.2 2.5 151 chr3R 20008801 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008952 5` UTR MED25 + chr3R_13_20005001 chr3R_20005001 RAL-531 1967 chr3R 20060622 20060640 chr3R 20060724 20060743 8 101 8.0 3.0 5.5 1.2 121 chr3R 20060622 intergenic not near genes chr3R 20060682 intergenic not near genes chr3R 20060743 intergenic not near genes chr3R_8_20060001 chr3R_20060001 RAL-531 1968 chr3R 20060641 20060657 chr3R 20060719 20060741 5 88 5.5 3.0 4.2 1.0 100 chr3R 20060641 intergenic not near genes chr3R 20060691 intergenic not near genes chr3R 20060741 intergenic not near genes chr3R_5_20060001 chr3R_20060001 RAL-531 1969 chr3R 20109543 20109569 chr3R 20114762 20114785 copia 7 5223 3.0 6.0 4.5 1.3 5242 chr3R 20109543 intergenic not near genes chr3R 20112164 intergenic not near genes chr3R 20114785 intergenic CG10887 + chr3R_7_20110001 chr3R_20110001 RAL-531 1970 chr3R 20156684 20156718 chr3R 20165874 20165908 roo 8 9188 3.0 7.0 5.0 1.3 9224 chr3R 20156684 intergenic not near genes chr3R 20161296 intergenic not near genes chr3R 20165908 intergenic not near genes chr3R_8_20160001 chr3R_20160001 RAL-531 1971 chr3R 20197103 20197149 chr3R 20197190 20197224 10 92 2.5 3.5 3.0 2.5 121 chr3R 20197103 intergenic not near genes chr3R 20197164 intergenic not near genes chr3R 20197224 intergenic not near genes chr3R_10_20195001 chr3R_20195001 RAL-531 1972 chr3R 20201332 20201380 chr3R 20201438 20201484 13 103 4.0 3.5 3.8 2.7 152 chr3R 20201332 intergenic not near genes chr3R 20201408 intergenic not near genes chr3R 20201484 intergenic not near genes chr3R_13_20200001 chr3R_20200001 RAL-531 1973 chr3R 20245275 20245301 chr3R 20248886 20248931 F-element 12 3627 0.0 3.5 1.8 4.3 3656 chr3R 20245275 3` UTR Nlg4 + chr3R 20247103 intergenic not near genes chr3R 20248931 intergenic not near genes chr3R_12_20245001 chr3R_20245001 RAL-531 1974 chr3R 20252201 20252247 chr3R 20252299 20252345 16 97 3.5 5.0 4.2 3.1 144 chr3R 20252201 intergenic not near genes chr3R 20252273 intergenic cic + chr3R 20252345 intergenic cic + chr3R_16_20250001 chr3R_20250001 RAL-531 1975 chr3R 20256844 20256869 chr3R 20256942 20256967 8 98 0.5 10.0 5.2 1.3 123 chr3R 20256844 intron cic + chr3R 20256906 intron cic + chr3R 20256967 intron cic + chr3R_8_20255001 chr3R_20255001 RAL-531 1976 chr3R 20266507 20266548 chr3R 20272998 20273034 Burdock 19 6489 2.0 8.5 5.2 3.1 6527 chr3R 20266507 intron cic + chr3R 20269770 intron cic + chr3R 20273034 intron cic + chr3R_19_20265001 chr3R_20265001 RAL-531 1977 chr3R 20282255 20282303 chr3R 20282351 20282399 15 96 0.5 4.0 2.2 4.7 144 chr3R 20282255 intron cic + chr3R 20282327 intron cic + chr3R 20282399 intron cic + chr3R_15_20280001 chr3R_20280001 RAL-531 1978 chr3R 20330978 20331030 chr3R 20331484 20331535 roo 15 505 6.5 9.0 7.8 1.7 557 chr3R 20330978 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331535 intergenic not near genes chr3R_15_20330001 chr3R_20330001 RAL-531 1979 chr3R 20352057 20352086 chr3R 20352179 20352211 12 123 4.0 4.5 4.2 2.3 154 chr3R 20352057 intergenic not near genes chr3R 20352134 intergenic not near genes chr3R 20352211 intergenic not near genes chr3R_12_20350001 chr3R_20350001 RAL-531 1980 chr3R 20353969 20353978 chr3R 20354036 20354084 6 94 4.0 2.5 3.2 1.4 115 chr3R 20353969 intergenic not near genes chr3R 20354026 intergenic not near genes chr3R 20354084 intergenic not near genes chr3R_6_20350001 chr3R_20350001 RAL-531 1981 chr3R 20434826 20434864 chr3R 20435031 20435069 4 205 4.0 1.0 2.5 1.1 243 chr3R 20434826 intron Gfrl - chr3R 20434948 intron Gfrl - chr3R 20435069 intron Gfrl - chr3R_4_20430001 chr3R_20430001 RAL-531 1982 chr3R 20467096 20467114 chr3R 20467150 20467175 4 60 1.5 2.0 1.8 1.4 79 chr3R 20467096 intron Gfrl - chr3R 20467136 intron Gfrl - chr3R 20467175 intron Gfrl - chr3R_4_20465001 chr3R_20465001 RAL-531 1983 chr3R 20498498 20498523 chr3R 20498611 20498635 4 113 10.0 3.0 6.5 0.5 137 chr3R 20498498 intergenic not near genes chr3R 20498566 intergenic not near genes chr3R 20498635 intergenic not near genes chr3R_4_20495001 chr3R_20495001 RAL-531 1984 chr3R 20506578 20506615 chr3R 20507394 20507420 BS 9 819 5.0 5.0 5.0 1.5 842 chr3R 20506578 intergenic Or92a + chr3R 20506999 intergenic CG4288 - chr3R 20507420 3` UTR CG4288 - chr3R_9_20505001 chr3R_20505001 RAL-531 1985 chr3R 20512983 20513036 chr3R 20515706 20515759 opus 16 2723 7.0 4.5 5.8 2.4 2776 chr3R 20512983 intergenic not near genes chr3R 20514371 intergenic not near genes chr3R 20515759 intergenic not near genes chr3R_16_20510001 chr3R_20510001 RAL-531 1986 chr3R 20516520 20516570 chr3R 20516896 20516937 4 370 4.0 1.0 2.5 1.1 417 chr3R 20516520 intergenic not near genes chr3R 20516728 intergenic not near genes chr3R 20516937 intergenic not near genes chr3R_4_20515001 chr3R_20515001 RAL-531 1987 chr3R 20518981 20519033 chr3R 20519080 20519132 6 87 2.0 2.0 2.0 2.0 151 chr3R 20518981 intergenic not near genes chr3R 20519056 intergenic not near genes chr3R 20519132 intergenic not near genes chr3R_6_20515001 chr3R_20515001 RAL-531 1988 chr3R 20530471 20530508 chr3R 20530980 20531006 4 511 1.5 0.5 1.0 2.0 535 chr3R 20530471 intergenic not near genes chr3R 20530738 intergenic not near genes chr3R 20531006 intergenic not near genes chr3R_4_20530001 chr3R_20530001 RAL-531 1989 chr3R 20545953 20546009 chr3R 20546061 20546085 6 97 1.5 4.5 3.0 1.5 132 chr3R 20545953 intron Stat92E - chr3R 20546019 intron Stat92E - chr3R 20546085 intron Stat92E - chr3R_6_20545001 chr3R_20545001 RAL-531 1990 chr3R 20594461 20594512 chr3R 20594571 20594622 22 109 4.0 0.0 2.0 7.3 161 chr3R 20594461 intron bon + chr3R 20594542 intron bon + chr3R 20594622 intron bon + chr3R_22_20590001 chr3R_20590001 RAL-531 1991 chr3R 20686973 20686991 chr3R 20687398 20687438 5 436 2.5 2.5 2.5 1.4 465 chr3R 20686973 intergenic not near genes chr3R 20687206 intergenic not near genes chr3R 20687438 intergenic not near genes chr3R_5_20685001 chr3R_20685001 RAL-531 1992 chr3R 20722861 20722867 chr3R 20722979 20722993 4 128 3.5 1.0 2.2 1.2 132 chr3R 20722861 intergenic not near genes chr3R 20722927 intergenic not near genes chr3R 20722993 intergenic not near genes chr3R_4_20720001 chr3R_20720001 RAL-531 1993 chr3R 20748085 20748133 chr3R 20748185 20748233 8 100 1.0 4.5 2.8 2.1 148 chr3R 20748085 intron CG42322 + chr3R 20748159 intron CG42322 + chr3R 20748233 intron,3` UTR CG42322 +,Prosalpha4T1 - chr3R_8_20745001 chr3R_20745001 RAL-531 1994 chr3R 20767512 20767531 chr3R 20767594 20767632 6 102 4.0 1.0 2.5 1.7 120 chr3R 20767512 intron Syp + chr3R 20767572 intron Syp + chr3R 20767632 intron Syp + chr3R_6_20765001 chr3R_20765001 RAL-531 1995 chr3R 20771704 20771719 chr3R 20771788 20771820 5 97 0.0 4.5 2.2 1.6 116 chr3R 20771704 intron,intron Syp +,Takl1 - chr3R 20771762 intron,intron Syp +,Takl1 - chr3R 20771820 intron,exon Syp +,Takl1 - chr3R_5_20770001 chr3R_20770001 RAL-531 1996 chr3R 20787423 20787448 chr3R 20787530 20787559 4 110 4.0 2.0 3.0 1.0 136 chr3R 20787423 intron Syp + chr3R 20787491 intron Syp + chr3R 20787559 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-531 1997 chr3R 20829984 20829995 chr3R 20830053 20830056 6 66 2.5 0.0 1.2 2.7 72 chr3R 20829984 intron AdSS - chr3R 20830020 intron AdSS - chr3R 20830056 intron AdSS - chr3R_6_20830001 chr3R_20830001 RAL-531 1998 chr3R 20847761 20847789 chr3R 20848016 20848044 6 254 6.0 3.5 4.8 1.0 283 chr3R 20847761 intergenic CG15696 + chr3R 20847902 intergenic CG15696 + chr3R 20848044 intergenic CG15696 + chr3R_6_20845001 chr3R_20845001 RAL-531 1999 chr3R 20847790 20847804 chr3R 20848014 20848059 9 250 4.0 3.0 3.5 2.0 269 chr3R 20847790 intergenic CG15696 + chr3R 20847924 intergenic CG15696 + chr3R 20848059 intergenic CG15696 + chr3R_9_20845001 chr3R_20845001 RAL-531 2000 chr3R 20850066 20850084 chr3R 20850171 20850189 7 105 0.0 4.0 2.0 2.3 123 chr3R 20850066 intergenic RpS30 + chr3R 20850128 intergenic RpS30 + chr3R 20850189 intergenic RpS30 + chr3R_7_20850001 chr3R_20850001 RAL-531 2001 chr3R 20865794 20865806 chr3R 20865858 20865905 5 84 2.0 2.5 2.2 1.6 111 chr3R 20865794 intron CG3822 - chr3R 20865850 intron CG3822 - chr3R 20865905 intron CG3822 - chr3R_5_20865001 chr3R_20865001 RAL-531 2002 chr3R 20870233 20870284 chr3R 20870338 20870389 11 103 1.0 4.5 2.8 2.9 156 chr3R 20870233 intergenic not near genes chr3R 20870311 intergenic not near genes chr3R 20870389 intergenic not near genes chr3R_11_20870001 chr3R_20870001 RAL-531 2003 chr3R 20979464 20979517 chr3R 20979560 20979573 10 91 5.5 4.0 4.8 1.7 109 chr3R 20979464 intron Calx + chr3R 20979518 intron Calx + chr3R 20979573 intron Calx + chr3R_10_20975001 chr3R_20975001 RAL-531 2004 chr3R 21013997 21014039 chr3R 21014095 21014137 11 98 2.5 7.0 4.8 1.9 140 chr3R 21013997 3` UTR Calx + chr3R 21014067 3` UTR Calx + chr3R 21014137 3` UTR Calx + chr3R_11_21010001 chr3R_21010001 RAL-531 2005 chr3R 21074806 21074823 chr3R 21075047 21075064 8 241 4.5 9.5 7.0 1.0 258 chr3R 21074806 intron dmrt93B + chr3R 21074935 intron dmrt93B + chr3R 21075064 intron dmrt93B + chr3R_8_21070001 chr3R_21070001 RAL-531 2006 chr3R 21108022 21108047 chr3R 21108303 21108328 12 281 2.5 5.5 4.0 2.4 306 chr3R 21108022 intergenic Sec15 -,rtet + chr3R 21108175 intergenic Sec15 -,rtet + chr3R 21108328 intergenic rtet +,Sec15 - chr3R_12_21105001 chr3R_21105001 RAL-531 2007 chr3R 21129802 21130016 chr3R 21129911 21130113 27 95 0.5 0.5 0.5 18.0 311 chr3R 21129802 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129958 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130113 intergenic Ice2 +,Obp93a - chr3R_27_21125001 chr3R_21125001 RAL-531 2008 chr3R 21132611 21132640 chr3R 21132714 21132743 4 102 2.5 0.0 1.2 1.8 132 chr3R 21132611 3` UTR Ice2 + chr3R 21132677 3` UTR Ice2 + chr3R 21132743 3` UTR CG7009 - chr3R_4_21130001 chr3R_21130001 RAL-531 2009 chr3R 21159094 21159135 chr3R 21159217 21159258 18 120 4.0 1.0 2.5 5.1 164 chr3R 21159094 intron SNF4Agamma + chr3R 21159176 intron SNF4Agamma + chr3R 21159258 intron,3` UTR SNF4Agamma +,CG10824 - chr3R_18_21155001 chr3R_21155001 RAL-531 2010 chr3R 21163247 21163259 chr3R 21163338 21163357 5 93 0.0 8.0 4.0 1.0 110 chr3R 21163247 intron SNF4Agamma + chr3R 21163302 intron SNF4Agamma + chr3R 21163357 intron SNF4Agamma + chr3R_5_21160001 chr3R_21160001 RAL-531 2011 chr3R 21183238 21183257 chr3R 21183331 21183355 12 96 5.5 4.5 5.0 2.0 117 chr3R 21183238 intron SNF4Agamma + chr3R 21183296 intron SNF4Agamma + chr3R 21183355 intron SNF4Agamma + chr3R_12_21180001 chr3R_21180001 RAL-531 2012 chr3R 21214691 21214715 chr3R 21214792 21214815 6 101 4.5 0.5 2.5 1.7 124 chr3R 21214691 intergenic CG5862 + chr3R 21214753 intergenic CG5862 + chr3R 21214815 intergenic CG5862 + chr3R_6_21210001 chr3R_21210001 RAL-531 2013 chr3R 9393034 9393035 chr3R 21326811 21326811 4 11933776 16.0 20.5 18.2 0.2 11933777 chr3R 9393034 intron FER - chr3R 15359922 exon ldlCp - chr3R 21326811 intron CG16791 - chr3R_4_15355001 chr3R_15355001 RAL-531 2014 chr3R 21377773 21377802 chr3R 21378030 21378049 16 259 2.5 13.0 7.8 1.8 276 chr3R 21377773 intergenic mod(mdg4) - chr3R 21377911 intergenic not near genes chr3R 21378049 intergenic not near genes chr3R_16_21375001 chr3R_21375001 RAL-531 2015 chr3R 21464393 21464427 chr3R 21464499 21464531 5 104 2.5 0.5 1.5 2.0 138 chr3R 21464393 intergenic not near genes chr3R 21464462 intergenic not near genes chr3R 21464531 intergenic not near genes chr3R_5_21460001 chr3R_21460001 RAL-531 2016 chr3R 21471999 21472034 chr3R 21472100 21472109 6 89 0.0 2.0 1.0 3.0 110 chr3R 21471999 intergenic not near genes chr3R 21472054 intergenic not near genes chr3R 21472109 intergenic not near genes chr3R_6_21470001 chr3R_21470001 RAL-531 2017 chr3R 21481367 21481373 chr3R 21481478 21481484 5 111 10.5 0.0 5.2 0.8 117 chr3R 21481367 intergenic not near genes chr3R 21481426 intergenic not near genes chr3R 21481484 intergenic not near genes chr3R_5_21480001 chr3R_21480001 RAL-531 2018 chr3R 21505203 21505240 chr3R 21505305 21505332 9 95 3.5 2.5 3.0 2.2 129 chr3R 21505203 intron C15 + chr3R 21505268 intron C15 + chr3R 21505332 intron C15 + chr3R_9_21505001 chr3R_21505001 RAL-531 2019 chr3R 21506855 21506912 chr3R 21506961 21507012 13 104 0.0 3.0 1.5 5.2 157 chr3R 21506855 intron C15 + chr3R 21506934 intron C15 + chr3R 21507012 intron C15 + chr3R_13_21505001 chr3R_21505001 RAL-531 2020 chr3R 21519974 21520141 chr3R 21520095 21520210 19 113 1.5 1.5 1.5 7.6 236 chr3R 21519974 intergenic not near genes chr3R 21520092 intergenic not near genes chr3R 21520210 intergenic not near genes chr3R_19_21520001 chr3R_21520001 RAL-531 2021 chr3R 21725668 21725686 chr3R 21725824 21725842 8 156 0.0 9.0 4.5 1.5 174 chr3R 21725668 intergenic not near genes chr3R 21725755 intergenic not near genes chr3R 21725842 intergenic not near genes chr3R_8_21725001 chr3R_21725001 RAL-531 2022 chr3R 21734847 21734954 chr3R 21734943 21735064 10 98 0.0 0.0 0.0 10.0 217 chr3R 21734847 intergenic not near genes chr3R 21734956 intergenic not near genes chr3R 21735064 intergenic not near genes chr3R_10_21730001 chr3R_21730001 RAL-531 2023 chr3R 21883952 21883969 chr3R 21884049 21884067 4 98 2.5 4.0 3.2 1.0 115 chr3R 21883952 intron,3` UTR,3` UTR CR45046 -,CG31465 +,fit - chr3R 21884010 intron,3` UTR CR45046 -,fit - chr3R 21884067 intron,exon CR45046 -,fit - chr3R_4_21880001 chr3R_21880001 RAL-531 2024 chr3R 21907534 21907534 chr3R 28831801 28831802 7 6924267 15.0 9.5 12.2 0.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_7_25365001 chr3R_25365001 RAL-531 2025 chr3R 20177845 20177845 chr3R 21907535 21907535 4 1729690 21.0 17.0 19.0 0.2 1729690 chr3R 20177845 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907535 intergenic CG6678 + chr3R_4_21040001 chr3R_21040001 RAL-531 2026 chr3R 21907535 21907535 chr3R 28831801 28831802 15 6924266 15.0 9.5 12.2 1.1 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-531 2027 chr3R 21907536 21907536 chr3R 28831801 28831802 15 6924265 15.0 9.5 12.2 1.1 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-531 2028 chr3R 21918999 21919017 chr3R 21919099 21919117 5 100 0.0 5.5 2.8 1.3 118 chr3R 21918999 intergenic not near genes chr3R 21919058 intergenic not near genes chr3R 21919117 intergenic not near genes chr3R_5_21915001 chr3R_21915001 RAL-531 2029 chr3R 22055563 22055586 chr3R 22055761 22055795 8 204 3.5 3.0 3.2 1.9 232 chr3R 22055563 intron how + chr3R 22055679 intron how + chr3R 22055795 intron how + chr3R_8_22055001 chr3R_22055001 RAL-531 2030 chr3R 22190824 22190856 chr3R 22190917 22190938 12 91 3.0 5.0 4.0 2.4 114 chr3R 22190824 intron SKIP + chr3R 22190881 intron SKIP + chr3R 22190938 intron SKIP + chr3R_12_22190001 chr3R_22190001 RAL-531 2031 chr3R 22208130 22208165 chr3R 22208432 22208467 10 297 1.0 4.0 2.5 2.9 337 chr3R 22208130 intron,intron SKIP +,CR45224 - chr3R 22208298 intron,intron SKIP +,CR45224 - chr3R 22208467 intron,intron SKIP +,CR45224 - chr3R_10_22205001 chr3R_22205001 RAL-531 2032 chr3R 22234687 22234710 chr3R 22236001 22236046 pogo 4 1332 3.0 3.0 3.0 1.0 1359 chr3R 22234687 intron SKIP + chr3R 22235366 intron SKIP + chr3R 22236046 intron SKIP + chr3R_4_22235001 chr3R_22235001 RAL-531 2033 chr3R 22239493 22239524 chr3R 22248550 22248592 roo 4 9065 5.0 0.0 2.5 1.1 9099 chr3R 22239493 intron SKIP + chr3R 22244042 intron SKIP + chr3R 22248592 intron SKIP + chr3R_4_22240001 chr3R_22240001 RAL-531 2034 chr3R 22346161 22346208 chr3R 22346267 22346314 11 105 5.0 3.5 4.2 2.1 153 chr3R 22346161 intergenic not near genes chr3R 22346238 intergenic not near genes chr3R 22346314 intergenic not near genes chr3R_11_22345001 chr3R_22345001 RAL-531 2035 chr3R 22450531 22450563 chr3R 22453191 22453223 NOF 4 2654 4.0 3.0 3.5 0.9 2692 chr3R 22450531 intron CG34376 + chr3R 22451877 intron CG34376 + chr3R 22453223 intron CG34376 + chr3R_4_22450001 chr3R_22450001 RAL-531 2036 chr3R 22500001 22500046 chr3R 22500164 22500209 15 160 4.0 6.0 5.0 2.5 208 chr3R 22500001 intron Octbeta1R + chr3R 22500105 intron Octbeta1R + chr3R 22500209 intron Octbeta1R + chr3R_15_22500001 chr3R_22500001 RAL-531 2037 chr3R 22512406 22512454 chr3R 22512504 22512521 11 94 4.0 6.0 5.0 1.8 115 chr3R 22512406 intron Octbeta1R + chr3R 22512464 intron Octbeta1R + chr3R 22512521 intron Octbeta1R + chr3R_11_22510001 chr3R_22510001 RAL-531 2038 chr3R 22530892 22530944 chr3R 22530988 22531008 12 88 4.0 3.0 3.5 2.7 116 chr3R 22530892 exon CG33093 - chr3R 22530950 exon CG33093 - chr3R 22531008 exon CG33093 - chr3R_12_22530001 chr3R_22530001 RAL-531 2039 chr3R 22624043 22624075 chr3R 22624139 22624172 15 95 6.5 4.5 5.5 2.3 129 chr3R 22624043 intron loco - chr3R 22624108 intron loco - chr3R 22624172 intron loco - chr3R_15_22620001 chr3R_22620001 RAL-531 2040 chr3R 22672287 22672300 chr3R 22672395 22672413 6 112 5.0 6.5 5.8 0.9 126 chr3R 22672287 intron wake + chr3R 22672350 intron wake + chr3R 22672413 intron wake + chr3R_6_22670001 chr3R_22670001 RAL-531 2041 chr3R 22672301 22672329 chr3R 22672393 22672441 7 104 3.5 5.5 4.5 1.3 140 chr3R 22672301 intron wake + chr3R 22672371 intron wake + chr3R 22672441 intron wake + chr3R_7_22670001 chr3R_22670001 RAL-531 2042 chr3R 22769072 22769107 chr3R 22769169 22769204 7 92 4.5 5.0 4.8 1.2 132 chr3R 22769072 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769138 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769204 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_7_22765001 chr3R_22765001 RAL-531 2043 chr3R 22769108 22769121 chr3R 22769168 22769218 5 80 3.0 5.0 4.0 1.0 110 chr3R 22769108 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769163 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769218 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_5_22765001 chr3R_22765001 RAL-531 2044 chr3R 22797737 22797938 chr3R 22797843 22798053 14 101 0.0 0.0 0.0 14.0 316 chr3R 22797737 intergenic not near genes chr3R 22797895 intergenic not near genes chr3R 22798053 intergenic not near genes chr3R_14_22795001 chr3R_22795001 RAL-531 2045 chr3R 22842383 22842418 chr3R 22842485 22842537 8 112 1.5 4.0 2.8 2.1 154 chr3R 22842383 intergenic not near genes chr3R 22842460 intergenic not near genes chr3R 22842537 intergenic not near genes chr3R_8_22840001 chr3R_22840001 RAL-531 2046 chr3R 22853279 22853297 chr3R 22853373 22853394 4 95 2.0 2.0 2.0 1.3 115 chr3R 22853279 intergenic not near genes chr3R 22853336 intergenic not near genes chr3R 22853394 intergenic not near genes chr3R_4_22850001 chr3R_22850001 RAL-531 2047 chr3R 22871424 22871460 chr3R 22871533 22871579 10 116 0.5 1.0 0.8 5.6 155 chr3R 22871424 intergenic not near genes chr3R 22871502 intergenic not near genes chr3R 22871579 intergenic not near genes chr3R_10_22870001 chr3R_22870001 RAL-531 2048 chr3R 22880589 22880601 chr3R 22880683 22880697 4 94 4.0 4.5 4.2 0.8 108 chr3R 22880589 intergenic not near genes chr3R 22880643 intergenic not near genes chr3R 22880697 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-531 2049 chr3R 22880919 22880954 chr3R 22881077 22881112 14 156 4.0 3.5 3.8 2.9 193 chr3R 22880919 intergenic not near genes chr3R 22881016 intergenic not near genes chr3R 22881112 intergenic not near genes chr3R_14_22880001 chr3R_22880001 RAL-531 2050 chr3R 22881191 22881231 chr3R 22884911 22884951 Doc 6 3724 3.5 5.0 4.2 1.2 3760 chr3R 22881191 intergenic not near genes chr3R 22883071 intergenic not near genes chr3R 22884951 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-531 2051 chr3R 23069753 23069760 chr3R 23069856 23069861 4 102 5.5 2.5 4.0 0.8 108 chr3R 23069753 intergenic not near genes chr3R 23069807 intergenic not near genes chr3R 23069861 intergenic not near genes chr3R_4_23065001 chr3R_23065001 RAL-531 2052 chr3R 23070661 23070699 chr3R 23070768 23070796 8 99 0.0 3.5 1.8 2.9 135 chr3R 23070661 3` UTR CG13830 - chr3R 23070728 3` UTR CG13830 - chr3R 23070796 3` UTR CG13830 - chr3R_8_23070001 chr3R_23070001 RAL-531 2053 chr3R 23071103 23071148 chr3R 23071202 23071250 9 100 3.0 5.5 4.2 1.7 147 chr3R 23071103 3` UTR CG13830 - chr3R 23071176 3` UTR CG13830 - chr3R 23071250 3` UTR CG13830 - chr3R_9_23070001 chr3R_23070001 RAL-531 2054 chr3R 23177784 23177805 chr3R 23177877 23177892 10 94 2.5 3.0 2.8 2.6 108 chr3R 23177784 intron Irk1 + chr3R 23177838 intron Irk1 + chr3R 23177892 intron Irk1 + chr3R_10_23175001 chr3R_23175001 RAL-531 2055 chr3R 23182665 23182697 chr3R 23182767 23182799 13 100 2.5 1.5 2.0 4.3 134 chr3R 23182665 intron Irk1 + chr3R 23182732 intron Irk1 + chr3R 23182799 intron Irk1 + chr3R_13_23180001 chr3R_23180001 RAL-531 2056 chr3R 23260951 23260982 chr3R 23261038 23261067 11 96 3.5 2.5 3.0 2.8 116 chr3R 23260951 3` UTR orb - chr3R 23261009 3` UTR orb - chr3R 23261067 3` UTR orb - chr3R_11_23260001 chr3R_23260001 RAL-531 2057 chr3R 23260983 23260989 chr3R 23261035 23261091 5 89 2.0 2.5 2.2 1.6 108 chr3R 23260983 3` UTR orb - chr3R 23261037 3` UTR orb - chr3R 23261091 3` UTR orb - chr3R_5_23260001 chr3R_23260001 RAL-531 2058 chr3R 23318387 23318394 chr3R 23318514 23318521 4 126 0.0 9.5 4.8 0.7 134 chr3R 23318387 intron pnt - chr3R 23318454 intron pnt - chr3R 23318521 intron pnt - chr3R_4_23315001 chr3R_23315001 RAL-531 2059 chr3R 23335414 23335465 chr3R 23335511 23335556 6 95 0.5 3.0 1.8 2.1 142 chr3R 23335414 intron pnt - chr3R 23335485 intron pnt - chr3R 23335556 intron pnt - chr3R_6_23335001 chr3R_23335001 RAL-531 2060 chr3R 23357005 23357013 chr3R 23357111 23357119 5 106 5.0 3.0 4.0 1.0 114 chr3R 23357005 intron Sec13 + chr3R 23357062 intron Sec13 + chr3R 23357119 intron Sec13 + chr3R_5_23355001 chr3R_23355001 RAL-531 2061 chr3R 23558383 23558397 chr3R 23560184 23560198 Bari1 4 1800 7.0 3.5 5.2 0.6 1815 chr3R 23558383 intron beat-IV + chr3R 23559290 intron beat-IV + chr3R 23560198 intron beat-IV + chr3R_4_23555001 chr3R_23555001 RAL-531 2062 chr3R 23558398 23558427 chr3R 23560183 23560228 Bari1 9 1799 3.0 3.5 3.2 2.1 1830 chr3R 23558398 intron beat-IV + chr3R 23559313 intron beat-IV + chr3R 23560228 intron beat-IV + chr3R_9_23555001 chr3R_23555001 RAL-531 2063 chr3R 23572739 23572765 chr3R 23572879 23572895 4 136 1.5 1.5 1.5 1.6 156 chr3R 23572739 intron beat-IV + chr3R 23572817 intron beat-IV + chr3R 23572895 intron beat-IV + chr3R_4_23570001 chr3R_23570001 RAL-531 2064 chr3R 23572776 23572779 chr3R 23572874 23572919 4 122 0.5 1.5 1.0 2.0 143 chr3R 23572776 intron beat-IV + chr3R 23572848 intron beat-IV + chr3R 23572919 intron beat-IV + chr3R_4_23570001 chr3R_23570001 RAL-531 2065 chr3R 23601131 23601157 chr3R 23601250 23601270 6 118 5.5 1.0 3.2 1.4 139 chr3R 23601131 intergenic not near genes chr3R 23601200 intergenic not near genes chr3R 23601270 intergenic not near genes chr3R_6_23600001 chr3R_23600001 RAL-531 2066 chr3R 23629799 23629847 chr3R 23629897 23629946 8 87 3.0 2.0 2.5 2.3 147 chr3R 23629799 intron CG31145 - chr3R 23629872 intron CG31145 - chr3R 23629946 intron CG31145 - chr3R_8_23625001 chr3R_23625001 RAL-531 2067 chr3R 23655549 23655594 chr3R 23655648 23655693 13 97 7.5 4.0 5.8 1.9 144 chr3R 23655549 intron CG31145 - chr3R 23655621 intron CG31145 - chr3R 23655693 intron CG31145 - chr3R_13_23655001 chr3R_23655001 RAL-531 2068 chr3R 23677172 23677198 chr3R 23677274 23677281 4 92 6.5 3.5 5.0 0.7 109 chr3R 23677172 intergenic CG13822 + chr3R 23677226 intergenic CG13822 + chr3R 23677281 intergenic CG13822 + chr3R_4_23675001 chr3R_23675001 RAL-531 2069 chr3R 23719176 23719218 chr3R 23719670 23719711 12 491 3.5 4.5 4.0 2.4 535 chr3R 23719176 intergenic CG10232 - chr3R 23719444 3` UTR CG10232 - chr3R 23719711 exon CG10232 - chr3R_12_23715001 chr3R_23715001 RAL-531 2070 chr3R 23808467 23808502 chr3R 23808599 23808647 8 137 6.0 1.5 3.8 1.7 180 chr3R 23808467 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23808557 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23808647 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R_8_23805001 chr3R_23805001 RAL-531 2071 chr3R 23835394 23835433 chr3R 23844554 23844603 roo 10 9168 3.5 4.5 4.0 2.0 9209 chr3R 23835394 intron CG34355 + chr3R 23839998 intron CG34355 + chr3R 23844603 intron CG34355 + chr3R_10_23835001 chr3R_23835001 RAL-531 2072 chr3R 23851068 23851089 chr3R 23858754 23858776 opus 10 7686 6.0 8.5 7.2 1.2 7708 chr3R 23851068 3` UTR CG34355 + chr3R 23854922 intergenic not near genes chr3R 23858776 intergenic not near genes chr3R_10_23850001 chr3R_23850001 RAL-531 2073 chr3R 23888067 23888104 chr3R 23888173 23888210 15 105 7.5 3.0 5.2 2.4 143 chr3R 23888067 intron Pli - chr3R 23888138 intron Pli - chr3R 23888210 intron Pli - chr3R_15_23885001 chr3R_23885001 RAL-531 2074 chr3R 23944902 23944922 chr3R 23945006 23945011 5 102 6.5 2.0 4.2 1.0 109 chr3R 23944902 intron CG12268 - chr3R 23944956 intron CG12268 - chr3R 23945011 intron CG12268 - chr3R_5_23940001 chr3R_23940001 RAL-531 2075 chr3R 23949029 23949074 chr3R 23949126 23949171 11 97 2.5 4.5 3.5 2.4 142 chr3R 23949029 intergenic not near genes chr3R 23949100 intergenic not near genes chr3R 23949171 intergenic not near genes chr3R_11_23945001 chr3R_23945001 RAL-531 2076 chr3R 24011655 24011679 chr3R 24011751 24011782 10 101 0.5 5.5 3.0 2.5 127 chr3R 24011655 intron KrT95D - chr3R 24011718 intron KrT95D - chr3R 24011782 intron KrT95D - chr3R_10_24010001 chr3R_24010001 RAL-531 2077 chr3R 24021607 24021653 chr3R 24021717 24021763 17 108 2.5 5.0 3.8 3.5 156 chr3R 24021607 intron KrT95D - chr3R 24021685 intron KrT95D - chr3R 24021763 intron KrT95D - chr3R_17_24020001 chr3R_24020001 RAL-531 2078 chr3R 24076899 24076944 chr3R 24078386 24078431 hobo 5 1482 3.5 2.0 2.8 1.3 1532 chr3R 24076899 intron 4EHP - chr3R 24077665 intron 4EHP - chr3R 24078431 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-531 2079 chr3R 24100442 24100464 chr3R 24100557 24100579 10 115 8.0 5.0 6.5 1.3 137 chr3R 24100442 intron 4EHP - chr3R 24100510 intron 4EHP - chr3R 24100579 intron 4EHP - chr3R_10_24100001 chr3R_24100001 RAL-531 2080 chr3R 24207197 24207240 chr3R 24212288 24212335 flea 10 5092 4.5 3.0 3.8 2.1 5138 chr3R 24207197 intron twin - chr3R 24209766 intron twin - chr3R 24212335 intron twin - chr3R_10_24205001 chr3R_24205001 RAL-531 2081 chr3R 24426275 24426307 chr3R 24426546 24426584 9 275 5.5 5.0 5.2 1.5 309 chr3R 24426275 intron nAChRalpha1 - chr3R 24426430 intron nAChRalpha1 - chr3R 24426584 intron nAChRalpha1 - chr3R_9_24425001 chr3R_24425001 RAL-531 2082 chr3R 24433333 24433369 chr3R 24433493 24433531 8 162 4.0 3.5 3.8 1.7 198 chr3R 24433333 intron nAChRalpha1 - chr3R 24433432 intron nAChRalpha1 - chr3R 24433531 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 RAL-531 2083 chr3R 24434223 24434251 chr3R 24434320 24434347 10 96 5.5 2.5 4.0 2.0 124 chr3R 24434223 intron nAChRalpha1 - chr3R 24434285 intron nAChRalpha1 - chr3R 24434347 intron nAChRalpha1 - chr3R_10_24430001 chr3R_24430001 RAL-531 2084 chr3R 24493259 24493288 chr3R 24493508 24493517 BS 10 245 6.0 7.0 6.5 1.3 258 chr3R 24493259 intergenic not near genes chr3R 24493388 intergenic not near genes chr3R 24493517 intergenic not near genes chr3R_10_24490001 chr3R_24490001 RAL-531 2085 chr3R 24527792 24527834 chr3R 24527903 24527945 13 111 2.0 2.0 2.0 4.3 153 chr3R 24527792 intergenic CG6607 +,CG13618 + chr3R 24527868 intergenic CG6607 +,CG13618 + chr3R 24527945 intergenic CG6607 +,CG13618 + chr3R_13_24525001 chr3R_24525001 RAL-531 2086 chr3R 24594659 24594666 chr3R 24594919 24594926 pogo 4 258 3.5 3.0 3.2 1.0 267 chr3R 24594659 intron mld + chr3R 24594792 intron mld + chr3R 24594926 intron mld + chr3R_4_24590001 chr3R_24590001 RAL-531 2087 chr3R 24667586 24667629 chr3R 24667683 24667716 16 96 3.0 0.0 1.5 6.4 130 chr3R 24667586 intron slo + chr3R 24667651 intron slo + chr3R 24667716 intron slo + chr3R_16_24665001 chr3R_24665001 RAL-531 2088 chr3R 24927113 24927149 chr3R 24931924 24931959 Doc 14 4810 6.5 0.5 3.5 3.1 4846 chr3R 24927113 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931959 intergenic CG11771 + chr3R_14_24925001 chr3R_24925001 RAL-531 2089 chr3R 24973931 24973982 chr3R 24974027 24974074 12 93 4.5 7.0 5.8 1.8 143 chr3R 24973931 intergenic not near genes chr3R 24974002 intergenic not near genes chr3R 24974074 intergenic not near genes chr3R_12_24970001 chr3R_24970001 RAL-531 2090 chr3R 25060665 25060705 chr3R 25060915 25060956 5 251 1.5 3.5 2.5 1.4 291 chr3R 25060665 intron Unc-13-4B + chr3R 25060810 intron Unc-13-4B + chr3R 25060956 intron Unc-13-4B + chr3R_5_25060001 chr3R_25060001 RAL-531 2091 chr3R 25064530 25064559 chr3R 25064637 25064677 8 112 0.0 2.0 1.0 4.0 147 chr3R 25064530 3` UTR veli - chr3R 25064604 3` UTR veli - chr3R 25064677 exon veli - chr3R_8_25060001 chr3R_25060001 RAL-531 2092 chr3R 25166344 25166395 chr3R 25166438 25166491 17 95 5.0 5.5 5.2 2.7 147 chr3R 25166344 intergenic not near genes chr3R 25166418 intergenic not near genes chr3R 25166491 intergenic not near genes chr3R_17_25165001 chr3R_25165001 RAL-531 2093 chr3R 25192773 25192810 chr3R 25192922 25192956 13 150 6.5 2.0 4.2 2.5 183 chr3R 25192773 intron,3` UTR lobo -,dan + chr3R 25192864 intron lobo - chr3R 25192956 intron lobo - chr3R_13_25190001 chr3R_25190001 RAL-531 2094 chr3R 25209579 25209628 chr3R 25209681 25209700 15 98 0.0 0.5 0.2 12.5 121 chr3R 25209579 intron CG13654 + chr3R 25209640 intron CG13654 + chr3R 25209700 intron CG13654 + chr3R_15_25205001 chr3R_25205001 RAL-531 2095 chr3R 25513023 25513033 chr3R 25513125 25513135 4 102 0.0 3.5 1.8 1.4 112 chr3R 25513023 intergenic not near genes chr3R 25513079 intergenic not near genes chr3R 25513135 intergenic not near genes chr3R_4_25510001 chr3R_25510001 RAL-531 2096 chr3R 25520980 25520992 chr3R 25521089 25521091 5 111 5.5 9.0 7.2 0.6 111 chr3R 25520980 intron msi + chr3R 25521036 intron msi + chr3R 25521091 intron msi + chr3R_5_25520001 chr3R_25520001 RAL-531 2097 chr3R 7773344 7773344 chr3R 25538123 25538124 7 17764780 18.5 11.5 15.0 0.4 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_7_16655001 chr3R_16655001 RAL-531 2098 chr3R 25671220 25671227 chr3R 25671338 25671345 5 118 11.5 1.0 6.2 0.7 125 chr3R 25671220 intron Lgr3 + chr3R 25671282 intron Lgr3 + chr3R 25671345 intron Lgr3 + chr3R_5_25670001 chr3R_25670001 RAL-531 2099 chr3R 25671235 25671273 chr3R 25671336 25671393 8 109 4.5 1.0 2.8 2.1 158 chr3R 25671235 intron Lgr3 + chr3R 25671314 intron Lgr3 + chr3R 25671393 intron Lgr3 + chr3R_8_25670001 chr3R_25670001 RAL-531 2100 chr3R 25725807 25725859 chr3R 25734987 25735039 roo 20 9179 6.5 4.5 5.5 3.1 9232 chr3R 25725807 intron LpR2 - chr3R 25730423 intron LpR2 - chr3R 25735039 intron LpR2 - chr3R_20_25730001 chr3R_25730001 RAL-531 2101 chr3R 25801267 25801284 chr3R 25802258 25802279 6 998 6.5 3.5 5.0 1.0 1012 chr3R 25801267 intergenic not near genes chr3R 25801773 intergenic not near genes chr3R 25802279 intergenic not near genes chr3R_6_25800001 chr3R_25800001 RAL-531 2102 chr3R 25810290 25810341 chr3R 25810409 25810446 14 115 3.5 3.0 3.2 3.3 156 chr3R 25810290 intergenic not near genes chr3R 25810368 intergenic not near genes chr3R 25810446 intergenic not near genes chr3R_14_25810001 chr3R_25810001 RAL-531 2103 chr3R 25832686 25832722 chr3R 25841878 25841924 roo 5 9188 0.5 2.5 1.5 2.0 9238 chr3R 25832686 exon alpha4GT2 + chr3R 25837305 intron alpha4GT2 + chr3R 25841924 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-531 2104 chr3R 25843616 25843662 chr3R 25843766 25843812 15 149 1.0 4.5 2.8 3.9 196 chr3R 25843616 intergenic CR45653 + chr3R 25843714 intergenic CR45653 + chr3R 25843812 intergenic CR45653 + chr3R_15_25840001 chr3R_25840001 RAL-531 2105 chr3R 25847669 25847724 chr3R 25847853 25847896 10 169 1.5 1.0 1.2 4.5 227 chr3R 25847669 intergenic CR45656 -,CR45657 + chr3R 25847782 intergenic CR45656 -,CR45657 + chr3R 25847896 intergenic CR45657 +,CR45656 - chr3R_10_25845001 chr3R_25845001 RAL-531 2106 chr3R 25869193 25869222 chr3R 25869407 25869436 7 210 8.5 3.5 6.0 1.0 243 chr3R 25869193 intron CG5890 + chr3R 25869314 intron CG5890 + chr3R 25869436 intron CG5890 + chr3R_7_25865001 chr3R_25865001 RAL-531 2107 chr3R 25905619 25905655 chr3R 25905742 25905778 10 122 7.0 0.0 3.5 2.2 159 chr3R 25905619 intron CR43259 - chr3R 25905698 intron CR43259 - chr3R 25905778 intron CR43259 - chr3R_10_25905001 chr3R_25905001 RAL-531 2108 chr3R 26063176 26063228 chr3R 26063290 26063342 6 110 4.5 0.0 2.2 1.9 166 chr3R 26063176 intergenic CG14551 - chr3R 26063259 intergenic CG14551 - chr3R 26063342 intergenic CG14551 - chr3R_6_26060001 chr3R_26060001 RAL-531 2109 chr3R 26140498 26140546 chr3R 26140631 26140679 18 130 6.0 4.5 5.2 2.9 181 chr3R 26140498 intergenic not near genes chr3R 26140588 intergenic not near genes chr3R 26140679 intergenic not near genes chr3R_18_26140001 chr3R_26140001 RAL-531 2110 chr3R 26144439 26144480 chr3R 26144537 26144558 16 94 3.5 4.5 4.0 3.2 119 chr3R 26144439 intergenic not near genes chr3R 26144498 intergenic not near genes chr3R 26144558 intergenic not near genes chr3R_16_26140001 chr3R_26140001 RAL-531 2111 chr3R 26203974 26204024 chr3R 26204081 26204096 7 99 3.5 1.0 2.2 2.2 122 chr3R 26203974 intron CR44320 + chr3R 26204035 intron CR44320 + chr3R 26204096 intron CR44320 + chr3R_7_26200001 chr3R_26200001 RAL-531 2112 chr3R 26207955 26208004 chr3R 26208059 26208108 17 104 3.5 7.5 5.5 2.6 153 chr3R 26207955 intron CR44320 + chr3R 26208032 intron CR44320 + chr3R 26208108 intron CR44320 + chr3R_17_26205001 chr3R_26205001 RAL-531 2113 chr3R 26226830 26226876 chr3R 26226925 26226939 11 76 3.0 3.5 3.2 2.6 109 chr3R 26226830 intergenic not near genes chr3R 26226884 intergenic not near genes chr3R 26226939 intergenic not near genes chr3R_11_26225001 chr3R_26225001 RAL-531 2114 chr3R 26239808 26239857 chr3R 26240139 26240186 18 327 2.0 6.0 4.0 3.6 378 chr3R 26239808 intron CR42745 + chr3R 26239997 intron CR42745 + chr3R 26240186 intron CR42745 + chr3R_18_26235001 chr3R_26235001 RAL-531 2115 chr3R 26284212 26284253 chr3R 26284341 26284380 10 128 1.5 2.5 2.0 3.3 168 chr3R 26284212 intergenic not near genes chr3R 26284296 intergenic not near genes chr3R 26284380 intergenic not near genes chr3R_10_26280001 chr3R_26280001 RAL-531 2116 chr3R 26294701 26294710 chr3R 26294798 26294801 6 97 9.0 3.5 6.2 0.8 100 chr3R 26294701 intergenic not near genes chr3R 26294751 intergenic not near genes chr3R 26294801 intergenic not near genes chr3R_6_26290001 chr3R_26290001 RAL-531 2117 chr3R 26294711 26294748 chr3R 26294796 26294846 22 92 5.0 3.5 4.2 4.2 135 chr3R 26294711 intergenic not near genes chr3R 26294778 intergenic not near genes chr3R 26294846 intergenic not near genes chr3R_22_26290001 chr3R_26290001 RAL-531 2118 chr3R 26365103 26365145 chr3R 26365208 26365249 9 104 4.0 4.0 4.0 1.8 146 chr3R 26365103 intergenic not near genes chr3R 26365176 intergenic not near genes chr3R 26365249 intergenic not near genes chr3R_9_26365001 chr3R_26365001 RAL-531 2119 chr3R 26370329 26370352 chr3R 26370434 26370457 6 105 0.0 5.5 2.8 1.6 128 chr3R 26370329 intergenic not near genes chr3R 26370393 intergenic not near genes chr3R 26370457 intergenic not near genes chr3R_6_26370001 chr3R_26370001 RAL-531 2120 chr3R 26376329 26376358 chr3R 26385488 26385500 roo 6 9165 2.5 0.5 1.5 2.4 9171 chr3R 26376329 intergenic not near genes chr3R 26380914 intergenic not near genes chr3R 26385500 intergenic not near genes chr3R_6_26380001 chr3R_26380001 RAL-531 2121 chr3R 26464943 26464949 chr3R 26465047 26465053 6 104 11.5 2.5 7.0 0.8 110 chr3R 26464943 intron CG5455 + chr3R 26464998 intron CG5455 + chr3R 26465053 intron CG5455 + chr3R_6_26460001 chr3R_26460001 RAL-531 2122 chr3R 26464953 26464982 chr3R 26465042 26465086 9 100 5.5 2.5 4.0 1.8 133 chr3R 26464953 intron CG5455 + chr3R 26465020 intron CG5455 + chr3R 26465086 intron CG5455 + chr3R_9_26465001 chr3R_26465001 RAL-531 2123 chr3R 26510488 26510535 chr3R 26519569 26519615 roo 19 9079 3.0 4.5 3.8 4.0 9127 chr3R 26510488 intron plum - chr3R 26515052 intron plum - chr3R 26519615 intron,5` UTR plum -,CR45226 + chr3R_19_26515001 chr3R_26515001 RAL-531 2124 chr3R 26540986 26541031 chr3R 26541085 26541130 8 99 1.5 7.0 4.2 1.5 144 chr3R 26540986 intron scrib + chr3R 26541058 intron scrib + chr3R 26541130 intron scrib + chr3R_8_26540001 chr3R_26540001 RAL-531 2125 chr3R 26542037 26542079 chr3R 26542136 26542172 7 96 2.5 1.0 1.8 2.5 135 chr3R 26542037 intron scrib + chr3R 26542104 intron scrib + chr3R 26542172 intron scrib + chr3R_7_26540001 chr3R_26540001 RAL-531 2126 chr3R 26558321 26558361 chr3R 26565638 26565658 Stalker4 6 7311 2.0 1.5 1.8 2.1 7337 chr3R 26558321 intron scrib + chr3R 26561990 intron scrib + chr3R 26565658 intron scrib + chr3R_6_26560001 chr3R_26560001 RAL-531 2127 chr3R 26607745 26607762 chr3R 26607816 26607858 5 84 3.0 4.5 3.8 1.0 113 chr3R 26607745 5` UTR CR44951 + chr3R 26607802 5` UTR CR44951 + chr3R 26607858 5` UTR CR44951 + chr3R_5_26605001 chr3R_26605001 RAL-531 2128 chr3R 26641635 26641663 chr3R 26641729 26641753 4 92 2.0 2.5 2.2 1.2 118 chr3R 26641635 intergenic not near genes chr3R 26641694 intergenic not near genes chr3R 26641753 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-531 2129 chr3R 26642712 26642754 chr3R 26643125 26643149 jockey 13 410 8.0 3.0 5.5 2.0 437 chr3R 26642712 intergenic not near genes chr3R 26642930 intergenic not near genes chr3R 26643149 intergenic not near genes chr3R_13_26640001 chr3R_26640001 RAL-531 2130 chr3R 26651549 26651550 chr3R 26651609 26651655 4 90 1.5 1.0 1.2 1.8 106 chr3R 26651549 intron beat-VII - chr3R 26651602 intron beat-VII - chr3R 26651655 intron beat-VII - chr3R_4_26650001 chr3R_26650001 RAL-531 2131 chr3R 26710823 26710852 chr3R 26710927 26710956 6 101 4.5 5.5 5.0 1.0 133 chr3R 26710823 intron amon - chr3R 26710890 intron amon - chr3R 26710956 intron amon - chr3R_6_26710001 chr3R_26710001 RAL-531 2132 chr3R 26767360 26767393 chr3R 26767446 26767472 6 82 2.5 0.5 1.5 2.4 112 chr3R 26767360 intergenic not near genes chr3R 26767416 intergenic not near genes chr3R 26767472 intergenic not near genes chr3R_6_26765001 chr3R_26765001 RAL-531 2133 chr3R 26770220 26770270 chr3R 26770317 26770367 20 94 1.5 2.0 1.8 7.1 147 chr3R 26770220 intergenic CR45563 + chr3R 26770294 intergenic CR45563 + chr3R 26770367 intergenic not near genes chr3R_20_26770001 chr3R_26770001 RAL-531 2134 chr3R 26810535 26810586 chr3R 26811038 26811082 roo 6 500 3.5 3.5 3.5 1.3 547 chr3R 26810535 intron Tl + chr3R 26810808 intron Tl + chr3R 26811082 intron Tl + chr3R_6_26810001 chr3R_26810001 RAL-531 2135 chr3R 27007388 27007433 chr3R 27016543 27016588 roo 25 9150 6.0 6.0 6.0 3.6 9200 chr3R 27007388 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016588 intron RYa-R + chr3R_25_27010001 chr3R_27010001 RAL-531 2136 chr3R 27028703 27028755 chr3R 27028802 27028854 16 98 5.0 3.0 4.0 3.2 151 chr3R 27028703 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028854 intron RYa-R + chr3R_16_27025001 chr3R_27025001 RAL-531 2137 chr3R 27140504 27140535 chr3R 27148132 27148165 412 5 7624 4.0 2.5 3.2 1.2 7661 chr3R 27140504 intron CG6051 - chr3R 27144334 intron CG6051 - chr3R 27148165 intron CG6051 - chr3R_5_27140001 chr3R_27140001 RAL-531 2138 chr3R 27301011 27301063 chr3R 27301392 27301444 10 379 4.0 6.0 5.0 1.7 433 chr3R 27301011 intron CG3339 - chr3R 27301228 intron CG3339 - chr3R 27301444 intron CG3339 - chr3R_10_27300001 chr3R_27300001 RAL-531 2139 chr3R 27315975 27316008 chr3R 27316069 27316098 7 87 3.5 2.5 3.0 1.8 123 chr3R 27315975 intron CG3339 - chr3R 27316036 intron CG3339 - chr3R 27316098 exon CG3339 - chr3R_7_27315001 chr3R_27315001 RAL-531 2140 chr3R 27329476 27329501 chr3R 27329557 27329598 5 93 3.0 3.5 3.2 1.2 122 chr3R 27329476 intergenic CG3330 - chr3R 27329537 intergenic CG3330 - chr3R 27329598 intergenic CG3330 - chr3R_5_27325001 chr3R_27325001 RAL-531 2141 chr3R 27335932 27335945 chr3R 27336033 27336045 4 101 3.5 0.0 1.8 1.4 113 chr3R 27335932 intergenic not near genes chr3R 27335988 intergenic not near genes chr3R 27336045 intergenic not near genes chr3R_4_27335001 chr3R_27335001 RAL-531 2142 chr3R 27335946 27335963 chr3R 27336031 27336064 4 97 2.5 0.0 1.2 1.8 118 chr3R 27335946 intergenic not near genes chr3R 27336005 intergenic not near genes chr3R 27336064 intergenic not near genes chr3R_4_27335001 chr3R_27335001 RAL-531 2143 chr3R 27342787 27342809 chr3R 27351375 27351410 Tirant 7 8595 5.0 4.5 4.8 1.2 8623 chr3R 27342787 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351410 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-531 2144 chr3R 27353302 27353321 chr3R 27353406 27353422 10 104 4.5 2.5 3.5 2.2 120 chr3R 27353302 intron CG42534 + chr3R 27353362 intron CG42534 + chr3R 27353422 intron CG42534 + chr3R_10_27350001 chr3R_27350001 RAL-531 2145 chr3R 27492358 27492406 chr3R 27492465 27492513 12 105 2.5 1.0 1.8 4.3 155 chr3R 27492358 intergenic not near genes chr3R 27492436 intergenic not near genes chr3R 27492513 intergenic not near genes chr3R_12_27490001 chr3R_27490001 RAL-531 2146 chr3R 27496591 27496603 chr3R 27496698 27496728 5 116 4.0 2.5 3.2 1.2 137 chr3R 27496591 intergenic not near genes chr3R 27496660 intergenic not near genes chr3R 27496728 intergenic not near genes chr3R_5_27495001 chr3R_27495001 RAL-531 2147 chr3R 27517427 27517463 chr3R 27517552 27517577 6 123 0.5 3.0 1.8 2.1 150 chr3R 27517427 intergenic CG13972 - chr3R 27517502 intergenic CG13972 - chr3R 27517577 intergenic CG13972 - chr3R_6_27515001 chr3R_27515001 RAL-531 2148 chr3R 27521136 27521184 chr3R 27530364 27530413 roo 18 9228 5.0 2.5 3.8 3.8 9277 chr3R 27521136 intron CG12885 + chr3R 27525774 intron CG12885 + chr3R 27530413 intron CG12885 + chr3R_18_27525001 chr3R_27525001 RAL-531 2149 chr3R 27706756 27706794 chr3R 27706852 27706891 13 93 8.0 5.0 6.5 1.7 135 chr3R 27706756 intergenic CG12428 -,CG12877 + chr3R 27706824 intergenic CG12428 -,CG12877 + chr3R 27706891 intergenic CG12428 -,CG12877 + chr3R_13_27705001 chr3R_27705001 RAL-531 2150 chr3R 27718557 27718597 chr3R 27718655 27718696 8 97 3.0 0.0 1.5 3.2 139 chr3R 27718557 intergenic not near genes chr3R 27718626 intergenic not near genes chr3R 27718696 intergenic not near genes chr3R_8_27715001 chr3R_27715001 RAL-531 2151 chr3R 27799916 27799960 chr3R 27800018 27800062 12 101 3.5 4.5 4.0 2.4 146 chr3R 27799916 intron CG34353 - chr3R 27799989 intron CG34353 - chr3R 27800062 intron CG34353 - chr3R_12_27795001 chr3R_27795001 RAL-531 2152 chr3R 27856750 27856789 chr3R 27858241 27858291 hopper2 10 1499 4.0 1.5 2.8 2.6 1541 chr3R 27856750 intron CG34353 - chr3R 27857520 intron CG34353 - chr3R 27858291 intron CG34353 - chr3R_10_27855001 chr3R_27855001 RAL-531 2153 chr3R 27862942 27862982 chr3R 27868260 27868307 Transpac 8 5316 2.5 2.5 2.5 2.3 5365 chr3R 27862942 intron CG34353 - chr3R 27865624 intron CG34353 - chr3R 27868307 intron CG34353 - chr3R_8_27865001 chr3R_27865001 RAL-531 2154 chr3R 27875683 27875729 chr3R 27882757 27882804 297 14 7072 2.5 6.5 4.5 2.5 7121 chr3R 27875683 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882804 intron CG34353 - chr3R_14_27875001 chr3R_27875001 RAL-531 2155 chr3R 27970821 27970824 chr3R 27970931 27970934 4 110 11.0 5.0 8.0 0.4 113 chr3R 27970821 intron betaTub97EF - chr3R 27970878 intron betaTub97EF - chr3R 27970934 intron betaTub97EF - chr3R_4_27970001 chr3R_27970001 RAL-531 2156 chr3R 28068507 28068529 chr3R 28073932 28073954 I-element 6 5442 1.0 0.5 0.8 3.3 5447 chr3R 28068507 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073954 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-531 2157 chr3R 28099176 28099194 chr3R 28099311 28099329 6 136 3.5 2.0 2.8 1.6 153 chr3R 28099176 intergenic not near genes chr3R 28099252 intergenic not near genes chr3R 28099329 intergenic not near genes chr3R_6_28095001 chr3R_28095001 RAL-531 2158 chr3R 28173663 28173697 chr3R 28181113 28181147 mdg1 11 7449 4.5 3.0 3.8 2.3 7484 chr3R 28173663 intron CG34354 + chr3R 28177405 intron CG34354 + chr3R 28181147 intron CG34354 + chr3R_11_28175001 chr3R_28175001 RAL-531 2159 chr3R 28223752 28223778 chr3R 28223841 28223888 10 107 2.0 3.5 2.8 2.6 136 chr3R 28223752 intron CG34354 + chr3R 28223820 intron CG34354 + chr3R 28223888 intron CG34354 + chr3R_10_28220001 chr3R_28220001 RAL-531 2160 chr3R 28253345 28253370 chr3R 28255865 28255892 jockey 8 2526 2.0 4.5 3.2 1.9 2547 chr3R 28253345 intergenic not near genes chr3R 28254618 intergenic not near genes chr3R 28255892 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-531 2161 chr3R 28262665 28262683 chr3R 28262758 28262779 6 96 3.5 6.0 4.8 1.0 114 chr3R 28262665 intergenic CG43125 - chr3R 28262722 intergenic CG43125 - chr3R 28262779 exon CG43125 - chr3R_6_28260001 chr3R_28260001 RAL-531 2162 chr3R 28301767 28301818 chr3R 28301869 28301910 14 98 4.0 1.0 2.5 4.0 143 chr3R 28301767 intergenic not near genes chr3R 28301838 intergenic not near genes chr3R 28301910 intergenic not near genes chr3R_14_28300001 chr3R_28300001 RAL-531 2163 chr3R 28302096 28302115 chr3R 28302557 28302577 jockey 10 462 2.5 5.5 4.0 2.0 481 chr3R 28302096 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302577 intergenic not near genes chr3R_10_28300001 chr3R_28300001 RAL-531 2164 chr3R 28345627 28345674 chr3R 28345723 28345769 10 96 3.0 3.5 3.2 2.4 142 chr3R 28345627 intergenic Moca-cyp + chr3R 28345698 intergenic not near genes chr3R 28345769 intergenic not near genes chr3R_10_28345001 chr3R_28345001 RAL-531 2165 chr3R 28352491 28352536 chr3R 28352851 28352896 12 356 3.5 3.0 3.2 2.9 405 chr3R 28352491 exon Or98b + chr3R 28352694 exon Or98b + chr3R 28352896 exon Or98b + chr3R_12_28350001 chr3R_28350001 RAL-531 2166 chr3R 28368977 28369009 chr3R 28369056 28369113 6 98 1.0 1.5 1.2 2.7 136 chr3R 28368977 intergenic not near genes chr3R 28369045 intergenic not near genes chr3R 28369113 intergenic not near genes chr3R_6_28365001 chr3R_28365001 RAL-531 2167 chr3R 28390097 28390139 chr3R 28390195 28390237 10 88 1.5 5.0 3.2 2.4 140 chr3R 28390097 intergenic not near genes chr3R 28390167 intergenic not near genes chr3R 28390237 intergenic not near genes chr3R_10_28390001 chr3R_28390001 RAL-531 2168 chr3R 28393682 28393731 chr3R 28393802 28393851 8 120 4.0 3.0 3.5 1.8 169 chr3R 28393682 intergenic not near genes chr3R 28393766 intergenic not near genes chr3R 28393851 intergenic not near genes chr3R_8_28390001 chr3R_28390001 RAL-531 2169 chr3R 28420975 28421009 chr3R 28421374 28421398 4 394 1.0 8.0 4.5 0.7 423 chr3R 28420975 intron beat-VI + chr3R 28421186 intron beat-VI + chr3R 28421398 intron beat-VI + chr3R_4_28420001 chr3R_28420001 RAL-531 2170 chr3R 28424157 28424201 chr3R 28424264 28424295 13 108 3.0 3.5 3.2 3.1 138 chr3R 28424157 intron beat-VI + chr3R 28424226 intron beat-VI + chr3R 28424295 intron beat-VI + chr3R_13_28420001 chr3R_28420001 RAL-531 2171 chr3R 28478471 28478497 chr3R 28478567 28478592 6 96 5.0 4.0 4.5 1.1 121 chr3R 28478471 intergenic not near genes chr3R 28478532 intergenic not near genes chr3R 28478592 intergenic not near genes chr3R_6_28475001 chr3R_28475001 RAL-531 2172 chr3R 28482306 28482349 chr3R 28482415 28482458 19 107 3.0 4.0 3.5 4.2 152 chr3R 28482306 intergenic not near genes chr3R 28482382 intergenic not near genes chr3R 28482458 intergenic not near genes chr3R_19_28480001 chr3R_28480001 RAL-531 2173 chr3R 28591263 28591293 chr3R 28591377 28591407 8 114 3.5 3.0 3.2 1.9 144 chr3R 28591263 5` UTR MRE23 + chr3R 28591335 5` UTR MRE23 + chr3R 28591407 intergenic MRE23 + chr3R_8_28590001 chr3R_28590001 RAL-531 2174 chr3R 28643417 28643431 chr3R 28643574 28643614 4 176 1.0 3.0 2.0 1.3 197 chr3R 28643417 intergenic not near genes chr3R 28643516 intergenic not near genes chr3R 28643614 intergenic not near genes chr3R_4_28640001 chr3R_28640001 RAL-531 2175 chr3R 28758274 28758298 chr3R 28763900 28763920 roo 4 5630 6.0 0.0 3.0 1.0 5646 chr3R 28758274 intergenic aqrs - chr3R 28761097 intergenic not near genes chr3R 28763920 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-531 2176 chr3R 28758311 28758317 chr3R 28771338 28771344 Stalker4 5 13027 3.0 5.0 4.0 1.0 13033 chr3R 28758311 intergenic aqrs - chr3R 28764828 intergenic not near genes chr3R 28771344 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-531 2177 chr3R 28763903 28763912 chr3R 28771366 28771375 Stalker4 6 7463 0.0 10.0 5.0 1.0 7472 chr3R 28763903 intergenic not near genes chr3R 28767639 intergenic not near genes chr3R 28771375 intergenic not near genes chr3R_6_28765001 chr3R_28765001 RAL-531 2178 chr3R 28775002 28775046 chr3R 28775159 28775204 5 153 2.5 2.5 2.5 1.4 202 chr3R 28775002 intergenic not near genes chr3R 28775103 intergenic not near genes chr3R 28775204 intergenic not near genes chr3R_5_28775001 chr3R_28775001 RAL-531 2179 chr3R 28792881 28792899 chr3R 28797977 28797985 jockey 4 5101 1.0 5.0 3.0 1.0 5104 chr3R 28792881 intergenic not near genes chr3R 28795433 intergenic not near genes chr3R 28797985 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-531 2180 chr3R 28799683 28799738 chr3R 28799782 28799827 6 96 2.5 2.5 2.5 1.7 144 chr3R 28799683 intergenic not near genes chr3R 28799755 intergenic not near genes chr3R 28799827 intergenic not near genes chr3R_6_28795001 chr3R_28795001 RAL-531 2181 chr3R 28800220 28800253 chr3R 28801130 28801167 10 909 5.0 4.5 4.8 1.7 947 chr3R 28800220 intergenic not near genes chr3R 28800694 intergenic not near genes chr3R 28801167 intergenic not near genes chr3R_10_28800001 chr3R_28800001 RAL-531 2182 chr3R 28802033 28802069 chr3R 28802122 28802167 13 90 2.5 3.0 2.8 3.4 134 chr3R 28802033 intergenic not near genes chr3R 28802100 intergenic not near genes chr3R 28802167 intergenic not near genes chr3R_13_28800001 chr3R_28800001 RAL-531 2183 chr3R 21907534 21907534 chr3R 28831801 28831803 30 6924266 15.0 9.5 12.2 2.3 6924269 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831803 intron WASp - chr3R_30_25365001 chr3R_25365001 RAL-531 2184 chr3R 28985026 28985037 chr3R 28985128 28985139 5 102 12.5 1.5 7.0 0.6 113 chr3R 28985026 intergenic not near genes chr3R 28985082 intergenic not near genes chr3R 28985139 intergenic not near genes chr3R_5_28985001 chr3R_28985001 RAL-531 2185 chr3R 29032723 29032762 chr3R 29032820 29032835 4 83 7.0 0.0 3.5 0.9 112 chr3R 29032723 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032779 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032835 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_4_29030001 chr3R_29030001 RAL-531 2186 chr3R 29070038 29070075 chr3R 29070138 29070176 19 100 5.5 8.0 6.8 2.4 138 chr3R 29070038 intron CG11873 + chr3R 29070107 intron CG11873 + chr3R 29070176 intron CG11873 + chr3R_19_29070001 chr3R_29070001 RAL-531 2187 chr3R 29079361 29079411 chr3R 29080753 29080773 NOF 16 1386 8.0 3.0 5.5 2.5 1412 chr3R 29079361 intron CG11873 + chr3R 29080067 intron CG11873 + chr3R 29080773 intron CG11873 + chr3R_16_29080001 chr3R_29080001 RAL-531 2188 chr3R 29128509 29128515 chr3R 29128619 29128625 4 110 0.0 14.0 7.0 0.5 116 chr3R 29128509 intergenic dgt6 -,CG11880 + chr3R 29128567 intergenic dgt6 -,CG11880 + chr3R 29128625 3` UTR dgt6 - chr3R_4_29125001 chr3R_29125001 RAL-531 2189 chr3R 29140165 29140181 chr3R 29140278 29140304 7 122 1.5 2.0 1.8 2.5 139 chr3R 29140165 intron CG14516 + chr3R 29140234 intron CG14516 + chr3R 29140304 intron CG14516 + chr3R_7_29140001 chr3R_29140001 RAL-531 2190 chr3R 29213041 29213091 chr3R 29213144 29213194 14 102 4.5 5.0 4.8 2.4 153 chr3R 29213041 intergenic not near genes chr3R 29213118 intergenic not near genes chr3R 29213194 intergenic not near genes chr3R_14_29210001 chr3R_29210001 RAL-531 2191 chr3R 29237250 29237283 chr3R 29239267 29239269 6 2021 4.5 3.5 4.0 1.2 2019 chr3R 29237250 exon CG11951 - chr3R 29238260 intron CG11951 - chr3R 29239269 exon CG31427 - chr3R_6_29235001 chr3R_29235001 RAL-531 2192 chr3R 29319809 29319854 chr3R 29320148 29320193 jockey 19 338 5.5 4.5 5.0 3.2 384 chr3R 29319809 intergenic Cnx99A - chr3R 29320001 intergenic Cnx99A - chr3R 29320193 intergenic not near genes chr3R_19_29320001 chr3R_29320001 RAL-531 2193 chr3R 29355980 29355987 chr3R 29356062 29356087 6 97 3.0 6.5 4.8 1.0 107 chr3R 29355980 intergenic CR45547 - chr3R 29356034 intergenic CR45547 - chr3R 29356087 intergenic CR45547 - chr3R_6_29355001 chr3R_29355001 RAL-531 2194 chr3R 29406601 29406636 chr3R 29407907 29407927 jockey 10 1302 3.5 4.0 3.8 2.1 1326 chr3R 29406601 intron Ptp99A + chr3R 29407264 intron Ptp99A + chr3R 29407927 intron Ptp99A + chr3R_10_29405001 chr3R_29405001 RAL-531 2195 chr3R 29449349 29449389 chr3R 29449446 29449487 17 98 3.5 5.5 4.5 3.1 138 chr3R 29449349 intron Ptp99A + chr3R 29449418 intron Ptp99A + chr3R 29449487 intron Ptp99A + chr3R_17_29445001 chr3R_29445001 RAL-531 2196 chr3R 29474444 29474461 chr3R 29474513 29474568 7 100 3.0 2.0 2.5 2.0 124 chr3R 29474444 intron Ptp99A + chr3R 29474506 intron Ptp99A + chr3R 29474568 intron Ptp99A + chr3R_7_29470001 chr3R_29470001 RAL-531 2197 chr3R 29505874 29505926 chr3R 29505970 29506021 10 92 0.5 2.5 1.5 4.0 147 chr3R 29505874 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506021 intergenic not near genes chr3R_10_29505001 chr3R_29505001 RAL-531 2198 chr3R 29508839 29508841 chr3R 29509035 29509050 4 206 0.0 6.5 3.2 1.0 211 chr3R 29508839 intergenic not near genes chr3R 29508944 intergenic not near genes chr3R 29509050 intergenic not near genes chr3R_4_29505001 chr3R_29505001 RAL-531 2199 chr3R 29627155 29627191 chr3R 29627879 29627905 6 721 2.5 2.0 2.2 1.9 750 chr3R 29627155 intergenic not near genes chr3R 29627530 intergenic not near genes chr3R 29627905 intergenic not near genes chr3R_6_29625001 chr3R_29625001 RAL-531 2200 chr3R 29663034 29663082 chr3R 29663336 29663376 10 297 2.5 2.0 2.2 3.1 342 chr3R 29663034 intergenic not near genes chr3R 29663205 intergenic not near genes chr3R 29663376 intergenic not near genes chr3R_10_29660001 chr3R_29660001 RAL-531 2201 chr3R 29681305 29681356 chr3R 29681536 29681567 13 225 1.5 1.5 1.5 5.2 262 chr3R 29681305 intron CG7582 - chr3R 29681436 intron CG7582 - chr3R 29681567 intron CG7582 - chr3R_13_29680001 chr3R_29680001 RAL-531 2202 chr3R 29718130 29718176 chr3R 29718225 29718272 9 94 1.5 5.0 3.2 2.1 142 chr3R 29718130 intergenic not near genes chr3R 29718201 intergenic CG15506 + chr3R 29718272 intergenic CG15506 + chr3R_9_29715001 chr3R_29715001 RAL-531 2203 chr3R 29738266 29738292 chr3R 29739745 29739780 hobo 6 1486 3.0 2.0 2.5 1.7 1514 chr3R 29738266 intergenic CG1969 +,CG7598 + chr3R 29739023 intron CG1969 + chr3R 29739780 5` UTR CG1969 + chr3R_6_29735001 chr3R_29735001 RAL-531 2204 chr3R 29754946 29754990 chr3R 29755044 29755087 5 97 0.0 5.0 2.5 1.4 141 chr3R 29754946 intergenic CR44953 -,yata + chr3R 29755016 intergenic CR44953 -,yata + chr3R 29755087 intergenic CR44953 - chr3R_5_29755001 chr3R_29755001 RAL-531 2205 chr3R 29758942 29758971 chr3R 29759030 29759069 12 94 2.5 7.0 4.8 2.1 127 chr3R 29758942 3` UTR CR44953 - chr3R 29759006 3` UTR CR44953 - chr3R 29759069 intergenic CR44953 - chr3R_12_29755001 chr3R_29755001 RAL-531 2206 chr3R 29760343 29760387 chr3R 29761564 29761606 pogo 12 1220 4.0 6.0 5.0 2.0 1263 chr3R 29760343 intergenic not near genes chr3R 29760974 intergenic not near genes chr3R 29761606 intergenic not near genes chr3R_12_29760001 chr3R_29760001 RAL-531 2207 chr3R 29882007 29882047 chr3R 29891184 29891214 roo 14 9176 3.5 9.0 6.2 1.9 9207 chr3R 29882007 intron CG31038 + chr3R 29886610 intron CG31038 + chr3R 29891214 intron CG31038 + chr3R_14_29885001 chr3R_29885001 RAL-531 2208 chr3R 29963480 29963512 chr3R 29963596 29963626 14 118 1.0 2.5 1.8 5.0 146 chr3R 29963480 intron TkR99D - chr3R 29963553 intron TkR99D - chr3R 29963626 intron TkR99D - chr3R_14_29960001 chr3R_29960001 RAL-531 2209 chr3R 29982978 29983028 chr3R 29983125 29983176 10 143 3.5 4.0 3.8 2.1 198 chr3R 29982978 intergenic CG7896 + chr3R 29983077 intergenic CG7896 + chr3R 29983176 intergenic CG7896 + chr3R_10_29980001 chr3R_29980001 RAL-531 2210 chr3R 30026944 30026987 chr3R 30027042 30027085 5 98 1.5 0.0 0.8 2.8 141 chr3R 30026944 intron Axn + chr3R 30027014 intron Axn + chr3R 30027085 intron Axn + chr3R_5_30025001 chr3R_30025001 RAL-531 2211 chr3R 30032141 30032164 chr3R 30032240 30032247 9 95 1.5 4.0 2.8 2.4 106 chr3R 30032141 intron Axn + chr3R 30032194 intron Axn + chr3R 30032247 intron Axn + chr3R_9_30030001 chr3R_30030001 RAL-531 2212 chr3R 30050281 30050319 chr3R 30050408 30050446 9 123 1.5 4.5 3.0 2.2 165 chr3R 30050281 intron,intron CG15528 -,CR44046 + chr3R 30050364 intron,intron CG15528 -,CR44046 + chr3R 30050446 intron,intron CG15528 -,CR44046 + chr3R_9_30050001 chr3R_30050001 RAL-531 2213 chr3R 30182751 30182778 chr3R 30182905 30182937 9 157 0.5 5.0 2.8 2.4 186 chr3R 30182751 intergenic not near genes chr3R 30182844 intergenic not near genes chr3R 30182937 intergenic not near genes chr3R_9_30180001 chr3R_30180001 RAL-531 2214 chr3R 30210598 30210673 chr3R 30210730 30210773 8 105 0.0 5.0 2.5 2.3 175 chr3R 30210598 intergenic Anp +,CecA1 + chr3R 30210686 intergenic CecA1 +,Anp + chr3R 30210773 intergenic CecA1 +,Anp + chr3R_8_30210001 chr3R_30210001 RAL-531 2215 chr3R 30238756 30238788 chr3R 30239934 30239970 1360 5 1182 4.0 6.0 5.0 0.8 1214 chr3R 30238756 intergenic not near genes chr3R 30239363 intergenic not near genes chr3R 30239970 intergenic not near genes chr3R_5_30235001 chr3R_30235001 RAL-531 2216 chr3R 30375527 30375572 chr3R 30383170 30383202 412 9 7641 3.5 1.5 2.5 2.6 7675 chr3R 30375527 intergenic not near genes chr3R 30379364 intergenic not near genes chr3R 30383202 intergenic not near genes chr3R_9_30375001 chr3R_30375001 RAL-531 2217 chr3R 30396197 30396242 chr3R 30404483 30404526 roo 8 8286 5.5 1.5 3.5 1.8 8329 chr3R 30396197 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404526 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 RAL-531 2218 chr3R 30456371 30456421 chr3R 30456471 30456521 14 98 5.0 4.5 4.8 2.4 150 chr3R 30456371 intergenic CG2224 - chr3R 30456446 3` UTR CG2224 - chr3R 30456521 3` UTR CG2224 - chr3R_14_30455001 chr3R_30455001 RAL-531 2219 chr3R 30457994 30458027 chr3R 30458094 30458126 9 95 6.0 0.5 3.2 2.1 132 chr3R 30457994 intron CG2224 - chr3R 30458060 intron CG2224 - chr3R 30458126 intron CG2224 - chr3R_9_30455001 chr3R_30455001 RAL-531 2220 chr3R 30480477 30480511 chr3R 30482955 30482999 jockey 10 2485 1.0 3.5 2.2 3.1 2522 chr3R 30480477 intron PH4alphaEFB + chr3R 30481738 intron PH4alphaEFB + chr3R 30482999 intron PH4alphaEFB + chr3R_10_30480001 chr3R_30480001 RAL-531 2221 chr3R 30488105 30488117 chr3R 30488204 30488216 7 99 1.5 0.0 0.8 3.9 111 chr3R 30488105 intergenic Jon99Fii - chr3R 30488160 intergenic Jon99Fii - chr3R 30488216 intergenic Jon99Fii - chr3R_7_30485001 chr3R_30485001 RAL-531 2222 chr3R 30548304 30548332 chr3R 30548402 30548430 6 98 4.0 7.0 5.5 0.9 126 chr3R 30548304 intron tmod + chr3R 30548367 intron tmod + chr3R 30548430 intron tmod + chr3R_6_30545001 chr3R_30545001 RAL-531 2223 chr3R 30573801 30573850 chr3R 30573920 30573969 11 119 2.0 5.0 3.5 2.4 168 chr3R 30573801 intron tmod + chr3R 30573885 intron tmod + chr3R 30573969 intron tmod + chr3R_11_30570001 chr3R_30570001 RAL-531 2224 chr3R 30592491 30592536 chr3R 30592618 30592649 6 120 2.5 2.0 2.2 1.9 158 chr3R 30592491 intergenic CG2246 - chr3R 30592570 intergenic CG2246 - chr3R 30592649 intergenic CG2246 - chr3R_6_30590001 chr3R_30590001 RAL-531 2225 chr3R 30627598 30627636 chr3R 30627687 30627722 7 82 3.5 1.5 2.5 2.0 124 chr3R 30627598 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627722 exon CG2267 - chr3R_7_30625001 chr3R_30625001 RAL-531 2226 chr3R 30648161 30648183 chr3R 30648268 30648293 4 106 0.5 1.0 0.8 2.2 132 chr3R 30648161 exon PH4alphaPV - chr3R 30648227 intron PH4alphaPV - chr3R 30648293 exon PH4alphaPV - chr3R_4_30645001 chr3R_30645001 RAL-531 2227 chr3R 30679504 30679547 chr3R 30686993 30687014 blood 6 7478 2.5 5.0 3.8 1.2 7510 chr3R 30679504 intergenic not near genes chr3R 30683259 intergenic not near genes chr3R 30687014 intergenic not near genes chr3R_6_30680001 chr3R_30680001 RAL-531 2228 chr3R 30818795 30818841 chr3R 30820380 30820426 1360 16 1582 6.5 5.5 6.0 2.3 1631 chr3R 30818795 intron cindr + chr3R 30819610 intron cindr + chr3R 30820426 intron cindr + chr3R_16_30815001 chr3R_30815001 RAL-531 2229 chr3R 30859385 30859421 chr3R 30859483 30859519 13 97 5.0 3.0 4.0 2.6 134 chr3R 30859385 intergenic not near genes chr3R 30859452 intergenic not near genes chr3R 30859519 intergenic not near genes chr3R_13_30855001 chr3R_30855001 RAL-531 2230 chr3R 30868703 30868752 chr3R 30868799 30868848 5 94 0.5 2.5 1.5 2.0 145 chr3R 30868703 3` UTR Cpr100A + chr3R 30868776 3` UTR Cpr100A + chr3R 30868848 3` UTR Cpr100A + chr3R_5_30865001 chr3R_30865001 RAL-531 2231 chr3R 30948062 30948109 chr3R 30948266 30948320 5 209 1.0 0.5 0.8 2.8 258 chr3R 30948062 intergenic not near genes chr3R 30948191 intergenic not near genes chr3R 30948320 intergenic not near genes chr3R_5_30945001 chr3R_30945001 RAL-531 2232 chr3R 30973128 30973158 chr3R 30973302 30973338 4 179 4.0 1.5 2.8 1.1 210 chr3R 30973128 intron 5-HT7 - chr3R 30973233 intron 5-HT7 - chr3R 30973338 intron 5-HT7 - chr3R_4_30970001 chr3R_30970001 RAL-531 2233 chr3R 30996626 30996668 chr3R 30996866 30996912 12 241 2.5 6.5 4.5 2.2 286 chr3R 30996626 intron 5-HT7 - chr3R 30996769 intron 5-HT7 - chr3R 30996912 intron 5-HT7 - chr3R_12_30995001 chr3R_30995001 RAL-531 2234 chr3R 31026470 31026505 chr3R 31026569 31026574 7 94 3.0 3.5 3.2 1.7 104 chr3R 31026470 intergenic not near genes chr3R 31026522 intergenic not near genes chr3R 31026574 intergenic not near genes chr3R_7_31025001 chr3R_31025001 RAL-531 2235 chr3R 31074220 31074261 chr3R 31081828 31081867 springer 9 7613 2.5 3.5 3.0 2.2 7647 chr3R 31074220 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081867 intron Sox100B + chr3R_9_31075001 chr3R_31075001 RAL-531 2236 chr3R 31084908 31084930 chr3R 31084991 31085026 6 93 2.0 4.0 3.0 1.5 118 chr3R 31084908 intergenic not near genes chr3R 31084967 intergenic not near genes chr3R 31085026 intergenic not near genes chr3R_6_31080001 chr3R_31080001 RAL-531 2237 chr3R 31137161 31137186 chr3R 31137245 31137281 7 91 0.5 5.0 2.8 1.8 120 chr3R 31137161 intron Gycbeta100B + chr3R 31137221 intron Gycbeta100B + chr3R 31137281 intron Gycbeta100B + chr3R_7_31135001 chr3R_31135001 RAL-531 2238 chr3R 31146732 31146738 chr3R 31146830 31146836 5 98 4.5 5.5 5.0 0.8 104 chr3R 31146732 intron Gycbeta100B + chr3R 31146784 intron Gycbeta100B + chr3R 31146836 intron Gycbeta100B + chr3R_5_31145001 chr3R_31145001 RAL-531 2239 chr3R 31146743 31146782 chr3R 31146829 31146860 11 92 2.0 5.5 3.8 2.3 117 chr3R 31146743 intron Gycbeta100B + chr3R 31146802 intron Gycbeta100B + chr3R 31146860 intron Gycbeta100B + chr3R_11_31145001 chr3R_31145001 RAL-531 2240 chr3R 31412702 31412729 chr3R 31412814 31412842 5 113 1.5 2.0 1.8 1.8 140 chr3R 31412702 intron Gprk2 + chr3R 31412772 intron Gprk2 + chr3R 31412842 intron Gprk2 + chr3R_5_31410001 chr3R_31410001 RAL-531 2241 chr3R 31413079 31413113 chr3R 31418299 31418326 copia 9 5212 2.5 0.5 1.5 3.6 5247 chr3R 31413079 intron Gprk2 + chr3R 31415702 intron Gprk2 + chr3R 31418326 intron Gprk2 + chr3R_9_31415001 chr3R_31415001 RAL-531 2242 chr3R 31426859 31426910 chr3R 31426971 31427022 12 109 3.0 4.0 3.5 2.7 163 chr3R 31426859 intron Gprk2 + chr3R 31426940 intron Gprk2 + chr3R 31427022 intron Gprk2 + chr3R_12_31425001 chr3R_31425001 RAL-531 2243 chr3R 31435343 31435390 chr3R 31435515 31435562 13 167 4.0 3.0 3.5 2.9 219 chr3R 31435343 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435562 intron Gprk2 + chr3R_13_31435001 chr3R_31435001 RAL-531 2244 chr3R 31600143 31600153 chr3R 31600210 31600255 4 80 1.0 0.5 0.8 2.2 112 chr3R 31600143 intron CycG - chr3R 31600199 intron CycG - chr3R 31600255 intron CycG - chr3R_4_31600001 chr3R_31600001 RAL-531 2245 chr3R 31627702 31627713 chr3R 31627772 31627802 5 82 0.5 6.0 3.2 1.2 100 chr3R 31627702 intron kek6 + chr3R 31627752 intron kek6 + chr3R 31627802 intron kek6 + chr3R_5_31625001 chr3R_31625001 RAL-531 2246 chr3R 31630042 31630076 chr3R 31630167 31630201 4 125 3.0 1.0 2.0 1.3 159 chr3R 31630042 intron kek6 + chr3R 31630122 intron kek6 + chr3R 31630201 intron kek6 + chr3R_4_31630001 chr3R_31630001 RAL-531 2247 chr3R 31691546 31691561 chr3R 31696297 31696347 Doc 7 4774 0.5 3.5 2.0 2.3 4801 chr3R 31691546 intergenic not near genes chr3R 31693946 intergenic not near genes chr3R 31696347 intergenic not near genes chr3R_7_31690001 chr3R_31690001 RAL-531 2248 chr3R 31758318 31758328 chr3R 31758664 31758674 4 346 3.5 4.0 3.8 0.8 356 chr3R 31758318 5` UTR CG2187 - chr3R 31758496 5` UTR CG2187 - chr3R 31758674 intergenic CR44263 +,CG2187 - chr3R_4_31755001 chr3R_31755001 RAL-531 2249 chr3R 31758350 31758356 chr3R 31758653 31758688 4 331 1.5 3.0 2.2 1.2 338 chr3R 31758350 5` UTR CG2187 - chr3R 31758519 5` UTR CG2187 - chr3R 31758688 intergenic CR44263 +,CG2187 - chr3R_4_31755001 chr3R_31755001 RAL-531 2250 chr3R 31808598 31808643 chr3R 31808694 31808739 20 94 4.5 9.0 6.8 2.6 141 chr3R 31808598 intron CG11576 - chr3R 31808668 intron CG11576 - chr3R 31808739 intron CG11576 - chr3R_20_31805001 chr3R_31805001 RAL-531 2251 chr3R 31911674 31911712 chr3R 31911766 31911818 13 99 1.0 2.5 1.8 4.6 144 chr3R 31911674 intron heph - chr3R 31911746 intron heph - chr3R 31911818 intron heph - chr3R_13_31910001 chr3R_31910001 RAL-531 2252 chr3R 31929471 31929487 chr3R 31930675 31930701 4 1207 14.0 11.0 12.5 0.3 1230 chr3R 31929471 intron heph - chr3R 31930086 intron heph - chr3R 31930701 intron heph - chr3R_4_31930001 chr3R_31930001 RAL-531 2253 chr3R 31931176 31931209 chr3R 31931278 31931311 15 102 6.5 3.5 5.0 2.5 135 chr3R 31931176 intron heph - chr3R 31931244 intron heph - chr3R 31931311 intron heph - chr3R_15_31930001 chr3R_31930001 RAL-531 2254 chr3R 31946003 31946028 chr3R 31946112 31946122 5 103 10.0 4.0 7.0 0.6 119 chr3R 31946003 intron heph - chr3R 31946062 intron heph - chr3R 31946122 intron heph - chr3R_5_31945001 chr3R_31945001 RAL-531 2255 chr3R 31946035 31946047 chr3R 31946109 31946125 4 84 5.0 2.5 3.8 0.8 90 chr3R 31946035 intron heph - chr3R 31946080 intron heph - chr3R 31946125 intron heph - chr3R_4_31945001 chr3R_31945001 RAL-531 2256 chr3R 31954413 31954443 chr3R 31954508 31954537 5 95 2.0 2.0 2.0 1.7 124 chr3R 31954413 intron heph - chr3R 31954475 intron heph - chr3R 31954537 intron heph - chr3R_5_31950001 chr3R_31950001 RAL-531 2257 chr3R 31957973 31958016 chr3R 31958065 31958091 5 95 1.0 5.0 3.0 1.2 118 chr3R 31957973 intron heph - chr3R 31958032 intron heph - chr3R 31958091 intron heph - chr3R_5_31955001 chr3R_31955001 RAL-531 2258 chr3R 31961337 31961368 chr3R 31961421 31961458 12 91 0.5 4.5 2.5 3.4 121 chr3R 31961337 intron heph - chr3R 31961398 intron heph - chr3R 31961458 intron heph - chr3R_12_31960001 chr3R_31960001 RAL-531 2259 chr3R 31978567 31978579 chr3R 31978750 31978764 4 186 4.5 2.5 3.5 0.9 197 chr3R 31978567 intron,intron heph -,CG2003 + chr3R 31978666 intron,intron heph -,CG2003 + chr3R 31978764 intron,intron heph -,CG2003 + chr3R_4_31975001 chr3R_31975001 RAL-531 2260 chr3R 31997980 31998023 chr3R 32005463 32005494 blood 14 7486 3.0 3.5 3.2 3.3 7514 chr3R 31997980 intron heph - chr3R 32001737 intron heph - chr3R 32005494 intron heph - chr3R_14_32000001 chr3R_32000001 RAL-531 2261 chr4 76489 76494 chr4 81952 81954 I-element 4 5462 6.5 6.5 6.5 0.5 5465 chr4 76489 intron pan + chr4 79222 intron pan + chr4 81954 intron pan + chr4_4_75001 chr4_75001 RAL-531 2262 chr4 257382 257434 chr4 257572 257624 23 189 3.5 3.0 3.2 5.5 242 chr4 257382 exon RhoGAP102A + chr4 257503 intron RhoGAP102A + chr4 257624 intron RhoGAP102A + chr4_23_255001 chr4_255001 RAL-531 2263 chr4 280784 280806 chr4 281433 281456 4 645 12.5 4.5 8.5 0.4 672 chr4 280784 intron Syt7 - chr4 281120 intron Syt7 - chr4 281456 intron Syt7 - chr4_4_280001 chr4_280001 RAL-531 2264 chr4 314495 314531 chr4 314593 314629 10 98 3.5 4.0 3.8 2.1 134 chr4 314495 intergenic Zip102B -,CG32850 + chr4 314562 intergenic CG32850 +,Zip102B - chr4 314629 intergenic CG32850 + chr4_10_310001 chr4_310001 RAL-531 2265 chr4 319972 320004 chr4 328168 328200 Stalker2 12 8196 9.0 6.5 7.8 1.4 8228 chr4 319972 3` UTR CG32850 + chr4 324086 intron CG32850 + chr4 328200 3` UTR,3` UTR CG32850 +,PMCA - chr4_12_320001 chr4_320001 RAL-531 2266 chr4 320006 320020 chr4 328166 328216 Stalker2 5 8189 4.5 6.0 5.2 0.8 8210 chr4 320006 3` UTR CG32850 + chr4 324111 intron CG32850 + chr4 328216 3` UTR,3` UTR CG32850 +,PMCA - chr4_5_320001 chr4_320001 RAL-531 2267 chr4 368685 368703 chr4 368835 368855 6 152 4.0 6.5 5.2 1.0 170 chr4 368685 intron Hcf + chr4 368770 intron Hcf + chr4 368855 intron Hcf + chr4_6_365001 chr4_365001 RAL-531 2268 chr4 671588 671610 chr4 680191 680213 Tirant 6 8603 9.0 5.5 7.2 0.7 8625 chr4 671588 intron CG11360 + chr4 675900 intron CG11360 + chr4 680213 intron CG11360 + chr4_6_675001 chr4_675001 RAL-531 2269 chr4 671613 671631 chr4 680187 680234 Tirant 10 8594 6.5 4.5 5.5 1.5 8621 chr4 671613 intron CG11360 + chr4 675924 intron CG11360 + chr4 680234 intron CG11360 + chr4_10_675001 chr4_675001 RAL-531 2270 chr4 852887 852923 chr4 853263 853302 7 382 7.5 1.0 4.2 1.3 415 chr4 852887 intergenic not near genes chr4 853094 intergenic not near genes chr4 853302 intergenic CG11148 - chr4_7_850001 chr4_850001 RAL-531 2271 chrX 295848 295881 chrX 303488 303520 412 6 7638 1.0 3.5 2.2 1.9 7672 chrX 295848 intron CG3777 + chrX 299684 intron CG3777 + chrX 303520 intron CG3777 + chrX_6_295001 chrX_295001 RAL-531 2272 chrX 318453 318493 chrX 323559 323599 flea 5 5106 4.0 4.5 4.2 1.0 5146 chrX 318453 intron,intron CG3777 +,CG32816 - chrX 321026 intron,intron CG3777 +,CG32816 - chrX 323599 intron,intron CG3777 +,CG32816 - chrX_5_320001 chrX_320001 RAL-531 2273 chrX 428420 428452 chrX 434605 434657 3S18 11 6200 4.0 5.0 4.5 2.0 6237 chrX 428420 intron CG32816 - chrX 431538 intron CG32816 - chrX 434657 intron CG32816 - chrX_11_430001 chrX_430001 RAL-531 2274 chrX 449875 449913 chrX 449986 450030 6 103 4.0 2.0 3.0 1.5 155 chrX 449875 intron CG32816 - chrX 449952 intron CG32816 - chrX 450030 intron CG32816 - chrX_6_445001 chrX_445001 RAL-531 2275 chrX 450346 450371 chrX 450444 450469 8 98 2.0 1.5 1.8 2.9 123 chrX 450346 intron CG32816 - chrX 450408 intron CG32816 - chrX 450469 intron CG32816 - chrX_8_450001 chrX_450001 RAL-531 2276 chrX 611117 611162 chrX 611227 611262 14 107 4.5 4.0 4.2 2.7 145 chrX 611117 intron CG13366 - chrX 611190 intron CG13366 - chrX 611262 intron CG13366 - chrX_14_610001 chrX_610001 RAL-531 2277 chrX 667628 667671 chrX 667732 667775 9 104 1.0 1.0 1.0 4.5 147 chrX 667628 intergenic not near genes chrX 667702 intergenic not near genes chrX 667775 intergenic not near genes chrX_9_665001 chrX_665001 RAL-531 2278 chrX 778129 778159 chrX 778236 778269 4 97 2.0 2.0 2.0 1.3 140 chrX 778129 intron fz3 + chrX 778199 intron fz3 + chrX 778269 intron fz3 + chrX_4_775001 chrX_775001 RAL-531 2279 chrX 812252 812298 chrX 817901 817947 297 11 5648 4.5 5.0 4.8 1.9 5695 chrX 812252 intron CG43867 - chrX 815100 intron CG43867 - chrX 817947 intron CG43867 - chrX_11_815001 chrX_815001 RAL-531 2280 chrX 827593 827634 chrX 835400 835440 roo 4 7803 3.0 1.0 2.0 1.3 7847 chrX 827593 intron CG43867 - chrX 831516 intron CG43867 - chrX 835440 intron CG43867 - chrX_4_830001 chrX_830001 RAL-531 2281 chrX 882217 882257 chrX 882324 882364 7 107 2.5 4.5 3.5 1.6 147 chrX 882217 intron CG43867 - chrX 882290 intron CG43867 - chrX 882364 intron CG43867 - chrX_7_880001 chrX_880001 RAL-531 2282 chrX 906687 906728 chrX 908495 908537 S-element 9 1806 1.0 14.5 7.8 1.0 1850 chrX 906687 intron CG43867 - chrX 907612 intron CG43867 - chrX 908537 intron CG43867 - chrX_9_905001 chrX_905001 RAL-531 2283 chrX 1051059 1051083 chrX 1051157 1051177 6 95 3.5 6.5 5.0 1.0 118 chrX 1051059 intron CR44779 + chrX 1051118 intron CR44779 + chrX 1051177 intron CR44779 + chrX_6_1050001 chrX_1050001 RAL-531 2284 chrX 1218482 1218485 chrX 1218583 1218599 5 110 3.5 5.0 4.2 1.0 117 chrX 1218482 3` UTR CG3638 - chrX 1218540 3` UTR CG3638 - chrX 1218599 3` UTR CG3638 - chrX_5_1215001 chrX_1215001 RAL-531 2285 chrX 1253730 1253759 chrX 1253820 1253861 4 96 2.0 5.0 3.5 0.9 131 chrX 1253730 intron Atf3 - chrX 1253796 intron Atf3 - chrX 1253861 intron Atf3 - chrX_4_1250001 chrX_1250001 RAL-531 2286 chrX 1357760 1357800 chrX 1367950 1367990 Doc 9 10189 5.0 4.5 4.8 1.6 10230 chrX 1357760 intergenic png - chrX 1362875 intergenic not near genes chrX 1367990 intergenic not near genes chrX_9_1360001 chrX_1360001 RAL-531 2287 chrX 1554518 1554538 chrX 1554663 1554677 5 150 7.5 6.5 7.0 0.6 159 chrX 1554518 exon Mur2B - chrX 1554598 intron Mur2B - chrX 1554677 exon Mur2B - chrX_5_1550001 chrX_1550001 RAL-531 2288 chrX 1554807 1554832 chrX 1555102 1555113 12 297 9.0 18.0 13.5 0.8 306 chrX 1554807 exon Mur2B - chrX 1554960 exon Mur2B - chrX 1555113 exon Mur2B - chrX_12_1550001 chrX_1550001 RAL-531 2289 chrX 1856659 1856695 chrX 1856989 1857020 11 329 1.0 3.0 2.0 3.7 361 chrX 1856659 intergenic not near genes chrX 1856840 intergenic not near genes chrX 1857020 intergenic not near genes chrX_11_1855001 chrX_1855001 RAL-531 2290 chrX 1930516 1930570 chrX 1938107 1938131 opus 13 7587 1.5 3.5 2.5 3.7 7615 chrX 1930516 3` UTR CG11596 + chrX 1934324 intergenic not near genes chrX 1938131 3` UTR CG3857 - chrX_13_1930001 chrX_1930001 RAL-531 2291 chrX 2146631 2146686 chrX 2146743 2146749 4 96 2.0 1.5 1.8 1.4 118 chrX 2146631 intron Pgd + chrX 2146690 intron Pgd + chrX 2146749 intron Pgd + chrX_4_2145001 chrX_2145001 RAL-531 2292 chrX 2291621 2291673 chrX 2291724 2291750 8 94 1.5 0.0 0.8 4.4 129 chrX 2291621 intron CG2865 - chrX 2291686 intron CG2865 - chrX 2291750 intron CG2865 - chrX_8_2290001 chrX_2290001 RAL-531 2293 chrX 2462730 2462757 chrX 2463051 2463056 4 310 5.0 1.5 3.2 1.0 326 chrX 2462730 intron boi - chrX 2462893 intron boi - chrX 2463056 intron boi - chrX_4_2460001 chrX_2460001 RAL-531 2294 chrX 2578803 2578822 chrX 2578927 2578933 4 119 3.5 4.0 3.8 0.8 130 chrX 2578803 intergenic Pdfr +,Vha36-3 - chrX 2578868 intergenic Vha36-3 -,Pdfr + chrX 2578933 intergenic Vha36-3 -,Pdfr + chrX_4_2575001 chrX_2575001 RAL-531 2295 chrX 2578825 2578840 chrX 2578926 2578951 6 115 3.5 4.0 3.8 1.2 126 chrX 2578825 intergenic Pdfr +,Vha36-3 - chrX 2578888 intergenic Vha36-3 -,Pdfr + chrX 2578951 intergenic Vha36-3 -,Pdfr + chrX_6_2575001 chrX_2575001 RAL-531 2296 chrX 2610367 2610384 chrX 2617504 2617506 HMS-Beagle 6 7134 7.5 4.5 6.0 0.9 7139 chrX 2610367 intergenic CG8636 - chrX 2613936 intergenic not near genes chrX 2617506 intergenic Tsp3A - chrX_6_2610001 chrX_2610001 RAL-531 2297 chrX 2664368 2664413 chrX 2665534 2665579 1360 10 1162 4.5 2.5 3.5 2.2 1211 chrX 2664368 intron sgg + chrX 2664974 intron sgg + chrX 2665579 intron sgg + chrX_10_2660001 chrX_2660001 RAL-531 2298 chrX 2844917 2844930 chrX 2852334 2852349 mdg1 4 7424 1.5 4.0 2.8 1.1 7432 chrX 2844917 intron kirre + chrX 2848633 intron kirre + chrX 2852349 intron kirre + chrX_4_2845001 chrX_2845001 RAL-531 2299 chrX 3010844 3010868 chrX 3010939 3010952 4 103 3.0 3.5 3.2 1.0 108 chrX 3010844 intron kirre + chrX 3010898 intron kirre + chrX 3010952 intron kirre + chrX_4_3010001 chrX_3010001 RAL-531 2300 chrX 3058018 3058045 chrX 3058279 3058306 pogo 6 261 3.5 4.0 3.8 1.2 288 chrX 3058018 intron kirre + chrX 3058162 intron kirre + chrX 3058306 intron kirre + chrX_6_3055001 chrX_3055001 RAL-531 2301 chrX 3109424 3109467 chrX 3109521 3109555 8 95 2.5 2.5 2.5 2.3 131 chrX 3109424 intron kirre + chrX 3109490 intron kirre + chrX 3109555 intron kirre + chrX_8_3105001 chrX_3105001 RAL-531 2302 chrX 3203468 3203488 chrX 3203662 3203707 9 214 1.0 3.5 2.2 2.8 239 chrX 3203468 intron dnc + chrX 3203588 intron dnc + chrX 3203707 intron dnc + chrX_9_3200001 chrX_3200001 RAL-531 2303 chrX 3218489 3218513 chrX 3227658 3227676 roo 8 9168 2.5 4.0 3.2 1.9 9187 chrX 3218489 intron dnc + chrX 3223082 intron dnc + chrX 3227676 intron dnc + chrX_8_3220001 chrX_3220001 RAL-531 2304 chrX 3243615 3243657 chrX 3243725 3243767 21 108 4.0 2.5 3.2 5.0 152 chrX 3243615 intron dnc + chrX 3243691 intron dnc + chrX 3243767 intron dnc + chrX_21_3240001 chrX_3240001 RAL-531 2305 chrX 3415002 3415046 chrX 3421207 3421251 3S18 9 6201 0.5 7.0 3.8 1.9 6249 chrX 3415002 intron,intron CR44999 +,CG12535 - chrX 3418126 intron,intron CR44999 +,CG12535 - chrX 3421251 intron,intron CR44999 +,CG12535 - chrX_9_3415001 chrX_3415001 RAL-531 2306 chrX 3752389 3752402 chrX 3764748 3764771 17.6 4 12366 14.0 16.5 15.2 0.2 12382 chrX 3752389 intron tlk + chrX 3758580 intron tlk + chrX 3764771 intron tlk + chrX_4_3755001 chrX_3755001 RAL-531 2307 chrX 3842306 3842349 chrX 3842567 3842607 pogo 8 260 2.0 4.5 3.2 1.9 301 chrX 3842306 intron ec + chrX 3842456 intron ec + chrX 3842607 intron ec + chrX_8_3840001 chrX_3840001 RAL-531 2308 chrX 3862813 3862848 chrX 3862920 3862955 6 100 3.5 6.0 4.8 1.0 142 chrX 3862813 intergenic yin - chrX 3862884 intergenic yin - chrX 3862955 intergenic yin - chrX_6_3860001 chrX_3860001 RAL-531 2309 chrX 3866110 3866135 chrX 3866184 3866198 9 82 2.5 1.0 1.8 3.2 88 chrX 3866110 intron yin - chrX 3866154 intron yin - chrX 3866198 intron yin - chrX_9_3865001 chrX_3865001 RAL-531 2310 chrX 3880461 3880483 chrX 3880555 3880573 8 102 3.0 3.5 3.2 1.9 112 chrX 3880461 intergenic VhaAC39-1 + chrX 3880517 intergenic VhaAC39-1 + chrX 3880573 intergenic VhaAC39-1 + chrX_8_3880001 chrX_3880001 RAL-531 2311 chrX 3881253 3881302 chrX 3881412 3881461 12 159 0.5 0.5 0.5 8.0 208 chrX 3881253 intron VhaAC39-1 + chrX 3881357 intron VhaAC39-1 + chrX 3881461 exon VhaAC39-1 + chrX_12_3880001 chrX_3880001 RAL-531 2312 chrX 3915514 3915549 chrX 3915621 3915656 5 105 1.0 4.0 2.5 1.4 142 chrX 3915514 intron CG42541 - chrX 3915585 intron CG42541 - chrX 3915656 intron CG42541 - chrX_5_3915001 chrX_3915001 RAL-531 2313 chrX 3986850 3986886 chrX 3994503 3994525 412 10 7646 2.5 4.5 3.5 2.2 7675 chrX 3986850 intergenic not near genes chrX 3990688 intergenic not near genes chrX 3994525 intergenic not near genes chrX_10_3990001 chrX_3990001 RAL-531 2314 chrX 4157874 4157917 chrX 4164942 4164982 297 7 7063 2.0 3.0 2.5 2.0 7108 chrX 4157874 intron Fas2 - chrX 4161428 intron Fas2 - chrX 4164982 intron Fas2 - chrX_7_4160001 chrX_4160001 RAL-531 2315 chrX 4206214 4206242 chrX 4206348 4206371 9 132 0.0 3.5 1.8 3.2 157 chrX 4206214 intergenic Fas2 - chrX 4206292 intergenic Fas2 - chrX 4206371 intergenic Fas2 - chrX_9_4205001 chrX_4205001 RAL-531 2316 chrX 4216320 4216337 chrX 4216419 4216424 4 95 5.0 5.5 5.2 0.6 104 chrX 4216320 intergenic not near genes chrX 4216372 intergenic CG15571 - chrX 4216424 intergenic CG15571 - chrX_4_4215001 chrX_4215001 RAL-531 2317 chrX 4324381 4324406 chrX 4324478 4324502 4 97 1.0 3.0 2.0 1.3 121 chrX 4324381 intron norpA + chrX 4324442 intron norpA + chrX 4324502 intron norpA + chrX_4_4320001 chrX_4320001 RAL-531 2318 chrX 4371028 4371074 chrX 4372615 4372661 24 1586 23.0 21.0 22.0 1.0 1633 chrX 4371028 3` UTR,intron CG3626 +,CR43614 - chrX 4371844 intron CR43614 - chrX 4372661 intron CR43614 - chrX_24_4370001 chrX_4370001 RAL-531 2319 chrX 4638643 4638666 chrX 4638789 4638823 4 150 1.5 3.0 2.2 1.2 180 chrX 4638643 exon pon + chrX 4638733 3` UTR pon + chrX 4638823 3` UTR pon + chrX_4_4635001 chrX_4635001 RAL-531 2320 chrX 4700379 4700424 chrX 4700737 4700787 jockey 11 360 2.5 6.5 4.5 2.0 408 chrX 4700379 3` UTR ctp + chrX 4700583 3` UTR ctp + chrX 4700787 3` UTR ctp + chrX_11_4700001 chrX_4700001 RAL-531 2321 chrX 4723558 4723582 chrX 4723658 4723672 4 92 2.0 0.0 1.0 2.0 114 chrX 4723558 exon Proc-R + chrX 4723615 intron Proc-R + chrX 4723672 intron Proc-R + chrX_4_4720001 chrX_4720001 RAL-531 2322 chrX 4731798 4731829 chrX 4736911 4736915 jockey 6 5103 3.5 0.5 2.0 2.0 5117 chrX 4731798 intergenic not near genes chrX 4734356 intergenic not near genes chrX 4736915 intergenic not near genes chrX_6_4730001 chrX_4730001 RAL-531 2323 chrX 4744139 4744172 chrX 4744257 4744268 8 115 0.5 0.5 0.5 5.3 129 chrX 4744139 intergenic not near genes chrX 4744204 intergenic not near genes chrX 4744268 intergenic not near genes chrX_8_4740001 chrX_4740001 RAL-531 2324 chrX 4792364 4792406 chrX 4792817 4792849 jockey 4 449 3.0 5.0 4.0 0.8 485 chrX 4792364 intergenic not near genes chrX 4792606 intergenic not near genes chrX 4792849 intergenic not near genes chrX_4_4790001 chrX_4790001 RAL-531 2325 chrX 4827987 4828002 chrX 4835347 4835391 Stalker4 5 7380 0.5 2.0 1.2 2.3 7404 chrX 4827987 intergenic not near genes chrX 4831689 intergenic not near genes chrX 4835391 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-531 2326 chrX 4979875 4979911 chrX 4979968 4979968 7 86 0.0 0.5 0.2 5.8 93 chrX 4979875 intron CR44833 - chrX 4979922 intron CR44833 - chrX 4979968 intron CR44833 - chrX_7_4975001 chrX_4975001 RAL-531 2327 chrX 4990023 4990075 chrX 4997257 4997309 roo 10 7234 2.5 2.0 2.2 3.1 7286 chrX 4990023 intron CR44833 - chrX 4993666 intron CR44833 - chrX 4997309 intron CR44833 - chrX_10_4990001 chrX_4990001 RAL-531 2328 chrX 5055841 5055874 chrX 5055993 5056025 9 149 3.0 7.5 5.2 1.5 184 chrX 5055841 intron,intron CR44833 -,ovo + chrX 5055933 intron,intron CR44833 -,ovo + chrX 5056025 intron,intron CR44833 -,ovo + chrX_9_5055001 chrX_5055001 RAL-531 2329 chrX 5096277 5096304 chrX 5103862 5103889 springer 6 7585 0.0 2.0 1.0 3.0 7612 chrX 5096277 intron,intron CG15465 +,rg + chrX 5100083 intron,intron CG15465 +,rg + chrX 5103889 intron,intron CG15465 +,rg + chrX_6_5100001 chrX_5100001 RAL-531 2330 chrX 5159704 5159746 chrX 5159819 5159861 14 115 2.0 1.5 1.8 5.0 157 chrX 5159704 intron,intron CG15465 +,rg + chrX 5159782 intron,intron CG15465 +,rg + chrX 5159861 intron,intron CG15465 +,rg + chrX_14_5155001 chrX_5155001 RAL-531 2331 chrX 5277543 5277580 chrX 5277736 5277768 9 192 2.0 3.0 2.5 2.6 225 chrX 5277543 intergenic not near genes chrX 5277656 intergenic not near genes chrX 5277768 intergenic not near genes chrX_9_5275001 chrX_5275001 RAL-531 2332 chrX 5280096 5280147 chrX 5280331 5280383 8 234 1.5 3.5 2.5 2.3 287 chrX 5280096 intergenic not near genes chrX 5280240 intergenic not near genes chrX 5280383 intergenic not near genes chrX_8_5280001 chrX_5280001 RAL-531 2333 chrX 5473568 5473615 chrX 5473664 5473683 10 85 4.5 2.0 3.2 2.4 115 chrX 5473568 intron SPR + chrX 5473626 intron SPR + chrX 5473683 intron SPR + chrX_10_5470001 chrX_5470001 RAL-531 2334 chrX 5512035 5512191 chrX 5512138 5512422 11 160 0.5 0.0 0.2 9.2 387 chrX 5512035 intergenic not near genes chrX 5512228 intergenic not near genes chrX 5512422 intergenic not near genes chrX_11_5510001 chrX_5510001 RAL-531 2335 chrX 5524851 5524856 chrX 5528733 5528739 412 4 3882 6.0 5.5 5.8 0.6 3888 chrX 5524851 intergenic snoRNA:Psi28S-3342 - chrX 5526795 intergenic not near genes chrX 5528739 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-531 2336 chrX 5883792 5883841 chrX 5884053 5884102 pogo 8 260 2.0 2.0 2.0 2.7 310 chrX 5883792 intron CR45668 - chrX 5883947 intron CR45668 - chrX 5884102 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-531 2337 chrX 5884159 5884190 chrX 5884420 5884450 pogo 7 261 4.5 4.0 4.2 1.3 291 chrX 5884159 intron CR45668 - chrX 5884304 intron CR45668 - chrX 5884450 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-531 2338 chrX 6080813 6080825 chrX 6080915 6080919 4 100 3.0 0.5 1.8 1.4 106 chrX 6080813 intron CG4660 - chrX 6080866 intron CG4660 - chrX 6080919 intron CG4660 - chrX_4_6080001 chrX_6080001 RAL-531 2339 chrX 6093298 6093321 chrX 6093391 6093420 6 96 2.0 3.0 2.5 1.7 122 chrX 6093298 intron Nep1 + chrX 6093359 intron Nep1 + chrX 6093420 intron Nep1 + chrX_6_6090001 chrX_6090001 RAL-531 2340 chrX 6171571 6171615 chrX 6179017 6179068 Quasimodo 13 7451 2.0 1.5 1.8 4.6 7497 chrX 6171571 intron Ca-alpha1T - chrX 6175320 intron Ca-alpha1T - chrX 6179068 intron Ca-alpha1T - chrX_13_6175001 chrX_6175001 RAL-531 2341 chrX 6312170 6312224 chrX 6312273 6312323 11 101 3.0 2.5 2.8 2.9 153 chrX 6312170 intron CG15894 + chrX 6312246 intron CG15894 + chrX 6312323 intron CG15894 + chrX_11_6310001 chrX_6310001 RAL-531 2342 chrX 6314432 6314448 chrX 6314496 6314530 5 74 1.0 3.5 2.2 1.6 98 chrX 6314432 intron CG15894 + chrX 6314481 intron CG15894 + chrX 6314530 intron CG15894 + chrX_5_6310001 chrX_6310001 RAL-531 2343 chrX 6392875 6392892 chrX 6397645 6397666 Doc 4 4778 1.5 2.0 1.8 1.4 4791 chrX 6392875 intergenic not near genes chrX 6395270 intergenic not near genes chrX 6397666 intergenic not near genes chrX_4_6395001 chrX_6395001 RAL-531 2344 chrX 6591838 6591871 chrX 6591941 6591976 7 105 1.5 0.0 0.8 3.9 138 chrX 6591838 intron Pat1 + chrX 6591907 intron Pat1 + chrX 6591976 intron Pat1 + chrX_7_6590001 chrX_6590001 RAL-531 2345 chrX 6592043 6592090 chrX 6592258 6592305 14 213 2.0 0.5 1.2 6.4 262 chrX 6592043 intron Pat1 + chrX 6592174 intron Pat1 + chrX 6592305 intron Pat1 + chrX_14_6590001 chrX_6590001 RAL-531 2346 chrX 6629766 6629788 chrX 6629873 6629895 4 107 2.0 2.0 2.0 1.3 129 chrX 6629766 intron pigs + chrX 6629830 intron pigs + chrX 6629895 intron pigs + chrX_4_6625001 chrX_6625001 RAL-531 2347 chrX 6814269 6814284 chrX 6814367 6814382 4 97 1.0 0.0 0.5 2.7 113 chrX 6814269 intron iav + chrX 6814326 intron iav + chrX 6814382 intron iav + chrX_4_6810001 chrX_6810001 RAL-531 2348 chrX 6897574 6897582 chrX 7243790 7243798 5 346216 1.0 4.5 2.8 1.3 346224 chrX 6897574 intergenic not near genes chrX 7070686 exon CG4607 + chrX 7243798 intron CR44357 - chrX_5_7070001 chrX_7070001 RAL-531 2349 chrX 6897590 6897704 chrX 6897688 6897819 5 120 1.5 1.5 1.5 2.0 229 chrX 6897590 intergenic not near genes chrX 6897704 intergenic not near genes chrX 6897819 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-531 2350 chrX 6984641 6984652 chrX 6984738 6984745 4 96 6.5 8.0 7.2 0.5 104 chrX 6984641 intron ogre - chrX 6984693 intron ogre - chrX 6984745 intron ogre - chrX_4_6980001 chrX_6980001 RAL-531 2351 chrX 6989487 6989529 chrX 6989594 6989631 9 104 1.5 5.0 3.2 2.1 144 chrX 6989487 intron ogre - chrX 6989559 intron ogre - chrX 6989631 intron ogre - chrX_9_6985001 chrX_6985001 RAL-531 2352 chrX 7023589 7023616 chrX 7030999 7031026 Tabor 6 7408 3.5 2.5 3.0 1.5 7437 chrX 7023589 intron CG12541 - chrX 7027308 intron CG12541 - chrX 7031026 intron CG12541 - chrX_6_7025001 chrX_7025001 RAL-531 2353 chrX 7125235 7125255 chrX 7134414 7134434 roo 4 9179 0.5 5.5 3.0 1.0 9199 chrX 7125235 intergenic not near genes chrX 7129834 intergenic not near genes chrX 7134434 intergenic not near genes chrX_4_7125001 chrX_7125001 RAL-531 2354 chrX 7322884 7322914 chrX 7322988 7323016 6 103 3.5 2.0 2.8 1.6 132 chrX 7322884 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7322950 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7323016 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX_6_7320001 chrX_7320001 RAL-531 2355 chrX 7345201 7345212 chrX 7345296 7345324 4 106 2.0 2.5 2.2 1.2 123 chrX 7345201 intron,intron CR44357 -,CG1677 - chrX 7345262 intron,intron CR44357 -,CG1677 - chrX 7345324 intron,intron CR44357 -,CG1677 - chrX_4_7345001 chrX_7345001 RAL-531 2356 chrX 7417984 7418028 chrX 7418091 7418134 9 106 2.5 2.5 2.5 2.6 150 chrX 7417984 intergenic CG34337 + chrX 7418059 intergenic CG34337 + chrX 7418134 intergenic CG34337 +,CG9657 + chrX_9_7415001 chrX_7415001 RAL-531 2357 chrX 7702885 7702920 chrX 7703344 7703374 jockey 9 455 3.0 5.0 4.0 1.8 489 chrX 7702885 intron CHES-1-like - chrX 7703130 intron CHES-1-like - chrX 7703374 intron CHES-1-like - chrX_9_7700001 chrX_7700001 RAL-531 2358 chrX 7737109 7737140 chrX 7737241 7737258 5 123 2.5 1.5 2.0 1.7 149 chrX 7737109 5` UTR Tom40 + chrX 7737184 intron Tom40 + chrX 7737258 intron Tom40 + chrX_5_7735001 chrX_7735001 RAL-531 2359 chrX 7832415 7832461 chrX 7832524 7832570 11 109 3.0 1.0 2.0 3.7 155 chrX 7832415 intron CG1402 + chrX 7832492 intron CG1402 + chrX 7832570 intron CG1402 + chrX_11_7830001 chrX_7830001 RAL-531 2360 chrX 7845712 7845759 chrX 7847222 7847263 hopper2 4 1504 1.5 3.5 2.5 1.1 1551 chrX 7845712 intergenic not near genes chrX 7846488 intergenic not near genes chrX 7847263 intergenic not near genes chrX_4_7845001 chrX_7845001 RAL-531 2361 chrX 7960858 7960902 chrX 7960967 7961011 14 109 7.5 4.0 5.8 2.1 153 chrX 7960858 intron,5` UTR sws -,CR45620 + chrX 7960934 intron sws - chrX 7961011 intron sws - chrX_14_7960001 chrX_7960001 RAL-531 2362 chrX 8031436 8031448 chrX 8035765 8035770 Juan 5 4328 4.0 6.0 5.0 0.8 4334 chrX 8031436 intergenic not near genes chrX 8033603 intergenic not near genes chrX 8035770 3` UTR CG2233 - chrX_5_8030001 chrX_8030001 RAL-531 2363 chrX 8066569 8066591 chrX 8066664 8066700 5 106 0.0 1.5 0.8 2.8 131 chrX 8066569 intron mys + chrX 8066634 intron mys + chrX 8066700 intron mys + chrX_5_8065001 chrX_8065001 RAL-531 2364 chrX 8066592 8066603 chrX 8066663 8066712 5 101 0.0 1.5 0.8 2.8 120 chrX 8066592 intron mys + chrX 8066652 intron mys + chrX 8066712 intron mys + chrX_5_8065001 chrX_8065001 RAL-531 2365 chrX 8085561 8085602 chrX 8085667 8085708 10 106 5.0 2.0 3.5 2.2 147 chrX 8085561 intron,5` UTR CG2256 -,CR45535 + chrX 8085634 intron,5` UTR CG2256 -,CR45535 + chrX 8085708 intron,5` UTR CG2256 -,CR45535 + chrX_10_8085001 chrX_8085001 RAL-531 2366 chrX 8092265 8092316 chrX 8092370 8092420 12 102 2.5 2.5 2.5 3.4 155 chrX 8092265 intron Ubc-E2H - chrX 8092342 intron Ubc-E2H - chrX 8092420 intron Ubc-E2H - chrX_12_8090001 chrX_8090001 RAL-531 2367 chrX 8506017 8506055 chrX 8506110 8506153 8 96 2.5 4.5 3.5 1.8 136 chrX 8506017 intron CG33181 + chrX 8506085 intron CG33181 + chrX 8506153 intron CG33181 + chrX_8_8505001 chrX_8505001 RAL-531 2368 chrX 8509100 8509149 chrX 8509196 8509223 6 93 2.5 1.0 1.8 2.1 123 chrX 8509100 intron CG33181 + chrX 8509162 intron CG33181 + chrX 8509223 intron CG33181 + chrX_6_8505001 chrX_8505001 RAL-531 2369 chrX 8658684 8658695 chrX 8658799 8658806 4 114 5.0 0.0 2.5 1.1 122 chrX 8658684 intergenic not near genes chrX 8658745 intergenic not near genes chrX 8658806 intergenic not near genes chrX_4_8655001 chrX_8655001 RAL-531 2370 chrX 8708690 8708730 chrX 8708853 8708893 9 164 29.5 13.5 21.5 0.4 203 chrX 8708690 intergenic not near genes chrX 8708792 intergenic not near genes chrX 8708893 intergenic not near genes chrX_9_8705001 chrX_8705001 RAL-531 2371 chrX 8727414 8727431 chrX 8727514 8727531 5 100 1.0 4.0 2.5 1.4 117 chrX 8727414 intergenic not near genes chrX 8727472 intergenic not near genes chrX 8727531 intergenic not near genes chrX_5_8725001 chrX_8725001 RAL-531 2372 chrX 8894983 8894988 chrX 8895085 8895090 4 102 0.5 0.0 0.2 3.3 107 chrX 8894983 intron Moe - chrX 8895036 intron Moe - chrX 8895090 intron Moe - chrX_4_8895001 chrX_8895001 RAL-531 2373 chrX 8922317 8922339 chrX 8922761 8922763 jockey 6 440 3.5 1.0 2.2 1.9 446 chrX 8922317 intron rdgA + chrX 8922540 intron rdgA + chrX 8922763 intron rdgA + chrX_6_8920001 chrX_8920001 RAL-531 2374 chrX 8922348 8922359 chrX 8922757 8922768 jockey 6 424 3.0 1.0 2.0 2.0 420 chrX 8922348 intron rdgA + chrX 8922558 intron rdgA + chrX 8922768 intron rdgA + chrX_6_8920001 chrX_8920001 RAL-531 2375 chrX 8927570 8927602 chrX 8929859 8929892 NOF 10 2284 4.5 5.0 4.8 1.7 2322 chrX 8927570 intron rdgA + chrX 8928731 intron rdgA + chrX 8929892 intron rdgA + chrX_10_8925001 chrX_8925001 RAL-531 2376 chrX 8948740 8948784 chrX 8956270 8956314 roo 7 7530 3.5 3.0 3.2 1.7 7574 chrX 8948740 intron rdgA + chrX 8952527 intron rdgA + chrX 8956314 intron rdgA + chrX_7_8950001 chrX_8950001 RAL-531 2377 chrX 8971872 8971918 chrX 8971966 8971995 8 89 1.5 1.5 1.5 3.2 123 chrX 8971872 intron rdgA + chrX 8971934 intron rdgA + chrX 8971995 intron rdgA + chrX_8_8970001 chrX_8970001 RAL-531 2378 chrX 9062726 9062753 chrX 9062809 9062851 9 93 3.5 0.5 2.0 3.0 125 chrX 9062726 intron CG15365 - chrX 9062788 intron CG15365 - chrX 9062851 intron CG15365 - chrX_9_9060001 chrX_9060001 RAL-531 2379 chrX 9218059 9218082 chrX 9218169 9218193 4 110 8.5 0.0 4.2 0.8 134 chrX 9218059 3` UTR t - chrX 9218126 3` UTR t - chrX 9218193 3` UTR t - chrX_4_9215001 chrX_9215001 RAL-531 2380 chrX 9229886 9229935 chrX 9229986 9230034 13 94 5.0 2.0 3.5 2.9 148 chrX 9229886 intron CG12121 - chrX 9229960 intron CG12121 - chrX 9230034 intron CG12121 - chrX_13_9225001 chrX_9225001 RAL-531 2381 chrX 9508121 9508161 chrX 9509659 9509693 jockey 9 1532 4.5 3.5 4.0 1.8 1572 chrX 9508121 intron CG32700 - chrX 9508907 intron CG32700 - chrX 9509693 intron CG32700 - chrX_9_9505001 chrX_9505001 RAL-531 2382 chrX 9555406 9555436 chrX 9555535 9555565 4 129 4.0 10.0 7.0 0.5 159 chrX 9555406 3` UTR RpS28b + chrX 9555486 3` UTR RpS28b + chrX 9555565 3` UTR RpS28b + chrX_4_9555001 chrX_9555001 RAL-531 2383 chrX 9575792 9575816 chrX 9576119 9576160 mdg3 8 334 3.0 3.0 3.0 2.0 368 chrX 9575792 intron,exon CG32699 -,CG42395 - chrX 9575976 intron,intron CG32699 -,CG42395 - chrX 9576160 intron,5` UTR CG32699 -,CG42395 - chrX_8_9575001 chrX_9575001 RAL-531 2384 chrX 9668709 9668744 chrX 9668807 9668809 14 94 6.0 2.5 4.2 2.7 100 chrX 9668709 3` UTR nej - chrX 9668759 3` UTR nej - chrX 9668809 3` UTR nej - chrX_14_9665001 chrX_9665001 RAL-531 2385 chrX 9758027 9758082 chrX 9758132 9758187 8 104 2.0 0.0 1.0 4.0 160 chrX 9758027 intergenic not near genes chrX 9758107 intergenic not near genes chrX 9758187 intergenic not near genes chrX_8_9755001 chrX_9755001 RAL-531 2386 chrX 10106674 10106723 chrX 10106774 10106820 7 96 3.0 3.5 3.2 1.7 146 chrX 10106674 intron RhoU + chrX 10106747 intron RhoU + chrX 10106820 intron RhoU + chrX_7_10105001 chrX_10105001 RAL-531 2387 chrX 10138202 10138244 chrX 10145725 10145767 412 11 7523 5.0 4.5 4.8 1.9 7565 chrX 10138202 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145767 intron,intron RhoU +,CR44894 - chrX_11_10140001 chrX_10140001 RAL-531 2388 chrX 10154268 10154311 chrX 10154364 10154407 12 96 3.0 1.5 2.2 3.8 139 chrX 10154268 intron,intron CR44894 -,CG12645 + chrX 10154338 intron,intron CR44894 -,CG12645 + chrX 10154407 intron,exon CR44894 -,CG12645 + chrX_12_10150001 chrX_10150001 RAL-531 2389 chrX 10216837 10216852 chrX 10216925 10216949 4 96 7.0 6.5 6.8 0.5 112 chrX 10216837 3` UTR l(1)G0230 + chrX 10216893 3` UTR l(1)G0230 + chrX 10216949 3` UTR l(1)G0230 + chrX_4_10215001 chrX_10215001 RAL-531 2390 chrX 10267298 10267323 chrX 10276462 10276493 roo 10 9169 1.0 7.0 4.0 2.0 9195 chrX 10267298 3` UTR alpha-Man-I - chrX 10271896 intron alpha-Man-I - chrX 10276493 3` UTR alpha-Man-I - chrX_10_10270001 chrX_10270001 RAL-531 2391 chrX 10306044 10306070 chrX 10306145 10306169 6 98 6.0 0.0 3.0 1.5 125 chrX 10306044 intron alpha-Man-I - chrX 10306106 intron alpha-Man-I - chrX 10306169 intron alpha-Man-I - chrX_6_10305001 chrX_10305001 RAL-531 2392 chrX 10314443 10314470 chrX 10314545 10314562 5 91 4.5 3.0 3.8 1.0 119 chrX 10314443 intron alpha-Man-I - chrX 10314502 intron alpha-Man-I - chrX 10314562 intron alpha-Man-I - chrX_5_10310001 chrX_10310001 RAL-531 2393 chrX 10317545 10317578 chrX 10317642 10317676 18 98 0.0 6.0 3.0 4.5 131 chrX 10317545 intron alpha-Man-I - chrX 10317610 intron alpha-Man-I - chrX 10317676 intron alpha-Man-I - chrX_18_10315001 chrX_10315001 RAL-531 2394 chrX 10338913 10338953 chrX 10339021 10339055 9 103 2.0 0.5 1.2 4.1 142 chrX 10338913 intron CG43740 + chrX 10338984 intron CG43740 + chrX 10339055 intron CG43740 + chrX_9_10335001 chrX_10335001 RAL-531 2395 chrX 10348782 10348830 chrX 10356367 10356415 springer 8 7585 3.0 4.0 3.5 1.8 7633 chrX 10348782 intergenic snoRNA:U3:9B + chrX 10352598 intergenic not near genes chrX 10356415 intergenic l(1)G0289 - chrX_8_10350001 chrX_10350001 RAL-531 2396 chrX 10369100 10369123 chrX 10369287 10369304 8 182 0.0 0.5 0.2 6.7 204 chrX 10369100 intron CG17841 + chrX 10369202 intron CG17841 + chrX 10369304 intron CG17841 + chrX_8_10365001 chrX_10365001 RAL-531 2397 chrX 10451083 10451117 chrX 10451186 10451220 4 101 2.5 5.5 4.0 0.8 137 chrX 10451083 intron CG32683 - chrX 10451152 intron CG32683 - chrX 10451220 intron CG32683 - chrX_4_10450001 chrX_10450001 RAL-531 2398 chrX 10550312 10550361 chrX 10550410 10550459 17 98 3.5 2.0 2.8 4.5 147 chrX 10550312 intron spri - chrX 10550386 intron spri - chrX 10550459 intron spri - chrX_17_10550001 chrX_10550001 RAL-531 2399 chrX 10590769 10590817 chrX 10590865 10590913 10 95 1.0 2.5 1.8 3.6 144 chrX 10590769 intergenic Hmr - chrX 10590841 intergenic Hmr - chrX 10590913 intergenic Hmr - chrX_10_10590001 chrX_10590001 RAL-531 2400 chrX 10640802 10640843 chrX 10641264 10641304 12 461 1.0 1.5 1.2 5.5 502 chrX 10640802 intron X11Lbeta + chrX 10641053 intron X11Lbeta + chrX 10641304 intron X11Lbeta + chrX_12_10640001 chrX_10640001 RAL-531 2401 chrX 10686033 10686070 chrX 10691190 10691227 roo 14 5156 3.5 4.0 3.8 2.9 5194 chrX 10686033 intron X11Lbeta + chrX 10688630 intron X11Lbeta + chrX 10691227 intron X11Lbeta + chrX_14_10685001 chrX_10685001 RAL-531 2402 chrX 10925492 10925502 chrX 10925590 10925601 4 99 4.5 5.0 4.8 0.7 109 chrX 10925492 exon v + chrX 10925546 3` UTR v + chrX 10925601 3` UTR v + chrX_4_10925001 chrX_10925001 RAL-531 2403 chrX 10925505 10925528 chrX 10925579 10925627 8 86 2.0 4.0 3.0 2.0 122 chrX 10925505 exon v + chrX 10925566 3` UTR v + chrX 10925627 3` UTR v + chrX_8_10925001 chrX_10925001 RAL-531 2404 chrX 10933908 10933941 chrX 10934010 10934049 8 107 0.0 1.5 0.8 4.4 141 chrX 10933908 intron Myo10A + chrX 10933978 intron Myo10A + chrX 10934049 intron Myo10A + chrX_8_10930001 chrX_10930001 RAL-531 2405 chrX 11096000 11096025 chrX 11103100 11103147 HMS-Beagle 4 7116 5.5 3.0 4.2 0.8 7147 chrX 11096000 intergenic not near genes chrX 11099574 intergenic not near genes chrX 11103147 intron CG42249 + chrX_4_11095001 chrX_11095001 RAL-531 2406 chrX 11109417 11109417 chrX 12946233 12946235 6 1836817 18.5 28.0 23.2 0.2 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_6_12025001 chrX_12025001 RAL-531 2407 chrX 11141981 11142052 chrX 11142055 11142148 5 81 0.0 0.0 0.0 5.0 167 chrX 11141981 intergenic CG15199 - chrX 11142064 intergenic CG15199 -,CG15202 + chrX 11142148 intergenic CG15199 -,CG15202 + chrX_5_11140001 chrX_11140001 RAL-531 2408 chrX 11184264 11184281 chrX 11189347 11189377 flea 4 5087 1.5 6.0 3.8 0.8 5113 chrX 11184264 intergenic not near genes chrX 11186820 intergenic not near genes chrX 11189377 intergenic not near genes chrX_4_11185001 chrX_11185001 RAL-531 2409 chrX 11205288 11205322 chrX 11205374 11205418 5 93 0.5 1.5 1.0 2.5 130 chrX 11205288 intergenic not near genes chrX 11205353 intergenic not near genes chrX 11205418 intergenic not near genes chrX_5_11205001 chrX_11205001 RAL-531 2410 chrX 11287160 11287181 chrX 11287266 11287287 7 106 3.5 6.0 4.8 1.2 127 chrX 11287160 intron CG44422 - chrX 11287224 intron CG44422 - chrX 11287287 intron CG44422 - chrX_7_11285001 chrX_11285001 RAL-531 2411 chrX 11312058 11312092 chrX 11319411 11319430 Stalker2 5 7350 1.5 1.5 1.5 2.0 7372 chrX 11312058 intergenic not near genes chrX 11315744 intergenic not near genes chrX 11319430 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-531 2412 chrX 11379747 11379792 chrX 11379912 11379940 8 160 2.0 3.5 2.8 2.1 193 chrX 11379747 intron dlg1 + chrX 11379844 intron dlg1 + chrX 11379940 intron dlg1 + chrX_8_11375001 chrX_11375001 RAL-531 2413 chrX 11633396 11633445 chrX 11640470 11640515 297 12 7074 4.0 2.0 3.0 3.0 7119 chrX 11633396 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640515 intron Ptp10D + chrX_12_11635001 chrX_11635001 RAL-531 2414 chrX 11651187 11651209 chrX 11651298 11651315 5 107 4.5 2.5 3.5 1.1 128 chrX 11651187 intron Ptp10D + chrX 11651251 intron Ptp10D + chrX 11651315 intron Ptp10D + chrX_5_11650001 chrX_11650001 RAL-531 2415 chrX 11684878 11684884 chrX 11685000 11685027 4 139 5.5 0.0 2.8 1.1 149 chrX 11684878 intron bif + chrX 11684952 intron bif + chrX 11685027 intron bif + chrX_4_11680001 chrX_11680001 RAL-531 2416 chrX 11684889 11684901 chrX 11684994 11685047 5 138 3.0 0.0 1.5 2.0 158 chrX 11684889 intron bif + chrX 11684968 intron bif + chrX 11685047 intron bif + chrX_5_11680001 chrX_11680001 RAL-531 2417 chrX 11799028 11799037 chrX 11799111 11799143 4 100 1.5 6.5 4.0 0.8 115 chrX 11799028 intron CkIIbeta + chrX 11799086 intron CkIIbeta + chrX 11799143 intron CkIIbeta + chrX_4_11795001 chrX_11795001 RAL-531 2418 chrX 11922347 11922383 chrX 11922499 11922536 11 150 4.0 7.0 5.5 1.7 189 chrX 11922347 exon Sclp - chrX 11922442 intron Sclp - chrX 11922536 intron Sclp - chrX_11_11920001 chrX_11920001 RAL-531 2419 chrX 12029368 12029416 chrX 12029467 12029483 10 96 4.0 2.0 3.0 2.5 115 chrX 12029368 intergenic Usp7 -,Cyp311a1 - chrX 12029426 intergenic Cyp311a1 -,Usp7 - chrX 12029483 intergenic Cyp311a1 -,Usp7 - chrX_10_12025001 chrX_12025001 RAL-531 2420 chrX 12272831 12272867 chrX 12272922 12272966 10 98 2.0 2.5 2.2 3.1 135 chrX 12272831 intron Ten-a + chrX 12272898 intron Ten-a + chrX 12272966 intron Ten-a + chrX_10_12270001 chrX_12270001 RAL-531 2421 chrX 12277171 12277209 chrX 12277272 12277321 4 109 1.5 2.0 1.8 1.4 150 chrX 12277171 intron Ten-a + chrX 12277246 intron Ten-a + chrX 12277321 intron Ten-a + chrX_4_12275001 chrX_12275001 RAL-531 2422 chrX 12375471 12375502 chrX 12375589 12375615 4 112 2.0 1.0 1.5 1.6 144 chrX 12375471 intergenic Ir11a - chrX 12375543 intergenic Ir11a - chrX 12375615 exon Ir11a - chrX_4_12375001 chrX_12375001 RAL-531 2423 chrX 12381839 12381901 chrX 12385772 12385823 flea 9 3927 0.0 4.5 2.2 2.8 3984 chrX 12381839 intergenic not near genes chrX 12383831 intergenic not near genes chrX 12385823 intergenic not near genes chrX_9_12380001 chrX_12380001 RAL-531 2424 chrX 12395015 12395069 chrX 12395117 12395146 10 91 2.0 2.0 2.0 3.3 131 chrX 12395015 intergenic not near genes chrX 12395080 intergenic not near genes chrX 12395146 intergenic not near genes chrX_10_12395001 chrX_12395001 RAL-531 2425 chrX 12430938 12430956 chrX 12431028 12431054 7 97 2.0 3.0 2.5 2.0 116 chrX 12430938 intergenic not near genes chrX 12430996 intergenic not near genes chrX 12431054 intergenic not near genes chrX_7_12430001 chrX_12430001 RAL-531 2426 chrX 12441591 12441591 chrX 14583540 14583542 5 2141951 9.5 4.0 6.8 0.6 2141951 chrX 12441591 intron Pkcdelta + chrX 13512566 intron Neto + chrX 14583542 intergenic nmdyn-D6 + chrX_5_13510001 chrX_13510001 RAL-531 2427 chrX 12528846 12528866 chrX 12528942 12528962 7 95 4.0 0.5 2.2 2.2 116 chrX 12528846 intron CG43921 - chrX 12528904 intron CG43921 - chrX 12528962 intron CG43921 - chrX_7_12525001 chrX_12525001 RAL-531 2428 chrX 12575353 12575389 chrX 12575476 12575519 6 118 3.5 3.5 3.5 1.3 166 chrX 12575353 intron CG11138 - chrX 12575436 intron CG11138 - chrX 12575519 intron CG11138 - chrX_6_12575001 chrX_12575001 RAL-531 2429 chrX 12912608 12912649 chrX 12912725 12912766 6 117 2.0 2.0 2.0 2.0 158 chrX 12912608 5` UTR CR45625 + chrX 12912687 5` UTR CR45625 + chrX 12912766 5` UTR CR45625 + chrX_6_12910001 chrX_12910001 RAL-531 2430 chrX 12930580 12930608 chrX 12937716 12937729 HMS-Beagle 10 7132 4.5 5.0 4.8 1.7 7149 chrX 12930580 intron fne + chrX 12934154 intron fne + chrX 12937729 intron fne + chrX_10_12930001 chrX_12930001 RAL-531 2431 chrX 12977050 12977056 chrX 12977146 12977152 4 96 0.0 4.0 2.0 1.3 102 chrX 12977050 intergenic not near genes chrX 12977101 intergenic not near genes chrX 12977152 intergenic not near genes chrX_4_12975001 chrX_12975001 RAL-531 2432 chrX 12987335 12987354 chrX 12987685 12987690 4 348 1.0 7.0 4.0 0.8 355 chrX 12987335 intergenic not near genes chrX 12987512 intergenic not near genes chrX 12987690 intergenic not near genes chrX_4_12985001 chrX_12985001 RAL-531 2433 chrX 13146581 13146627 chrX 13146689 13146732 16 107 6.5 1.0 3.8 3.3 151 chrX 13146581 intron CG32645 + chrX 13146656 intron CG32645 + chrX 13146732 intron CG32645 + chrX_16_13145001 chrX_13145001 RAL-531 2434 chrX 13161674 13161715 chrX 13161771 13161808 9 96 2.0 3.0 2.5 2.6 134 chrX 13161674 3` UTR CG12096 + chrX 13161741 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161808 3` UTR,3` UTR CG12096 +,CG34411 - chrX_9_13160001 chrX_13160001 RAL-531 2435 chrX 13172362 13172382 chrX 13172438 13172478 5 90 1.0 3.5 2.2 1.6 116 chrX 13172362 exon CG34411 - chrX 13172420 intron CG34411 - chrX 13172478 intron CG34411 - chrX_5_13170001 chrX_13170001 RAL-531 2436 chrX 13269189 13269212 chrX 13269277 13269293 9 91 0.0 0.0 0.0 9.0 104 chrX 13269189 intron HDAC4 - chrX 13269241 intron HDAC4 - chrX 13269293 intron HDAC4 - chrX_9_13265001 chrX_13265001 RAL-531 2437 chrX 13278130 13278175 chrX 13278233 13278278 12 103 5.5 0.5 3.0 3.0 148 chrX 13278130 intron HDAC4 - chrX 13278204 intron HDAC4 - chrX 13278278 intron HDAC4 - chrX_12_13275001 chrX_13275001 RAL-531 2438 chrX 13374849 13374854 chrX 13374933 13374954 4 92 7.5 4.0 5.8 0.6 105 chrX 13374849 intron CG1640 + chrX 13374902 intron CG1640 + chrX 13374954 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-531 2439 chrX 13401464 13401513 chrX 13401836 13401885 jockey 8 372 5.0 1.5 3.2 1.9 421 chrX 13401464 intergenic CG1673 +,CG12725 - chrX 13401674 intergenic CG12725 -,CG1673 + chrX 13401885 3` UTR CG12725 - chrX_8_13400001 chrX_13400001 RAL-531 2440 chrX 13429467 13429487 chrX 13430612 13430656 jockey 6 1157 6.5 4.5 5.5 0.9 1189 chrX 13429467 intergenic not near genes chrX 13430062 intergenic not near genes chrX 13430656 intergenic not near genes chrX_6_13430001 chrX_13430001 RAL-531 2441 chrX 13442119 13442171 chrX 13442230 13442282 7 107 0.0 2.0 1.0 3.5 163 chrX 13442119 intergenic not near genes chrX 13442200 intergenic not near genes chrX 13442282 intergenic not near genes chrX_7_13440001 chrX_13440001 RAL-531 2442 chrX 13463630 13463678 chrX 13469227 13469259 mdg3 16 5593 5.0 2.5 3.8 3.3 5629 chrX 13463630 intron Neto + chrX 13466444 intron Neto + chrX 13469259 intron Neto + chrX_16_13465001 chrX_13465001 RAL-531 2443 chrX 13937975 13938010 chrX 13941264 13941289 I-element 8 3289 0.5 3.0 1.8 2.9 3314 chrX 13937975 intron mamo - chrX 13939632 intron mamo - chrX 13941289 intron mamo - chrX_8_13935001 chrX_13935001 RAL-531 2444 chrX 14157573 14157608 chrX 14163250 14163275 297 6 5675 10.0 5.0 7.5 0.7 5702 chrX 14157573 intergenic not near genes chrX 14160424 intergenic not near genes chrX 14163275 intergenic not near genes chrX_6_14160001 chrX_14160001 RAL-531 2445 chrX 14302581 14302627 chrX 14302679 14302700 5 86 3.5 1.5 2.5 1.4 119 chrX 14302581 intergenic not near genes chrX 14302640 intergenic not near genes chrX 14302700 intergenic not near genes chrX_5_14300001 chrX_14300001 RAL-531 2446 chrX 14312755 14312795 chrX 14312856 14312886 12 100 3.5 2.5 3.0 3.0 131 chrX 14312755 intergenic not near genes chrX 14312820 intergenic not near genes chrX 14312886 intergenic not near genes chrX_12_14310001 chrX_14310001 RAL-531 2447 chrX 14381394 14381409 chrX 14381568 14381583 6 174 3.5 0.5 2.0 2.0 189 chrX 14381394 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381488 intron dpr8 + chrX 14381583 intron dpr8 + chrX_6_14380001 chrX_14380001 RAL-531 2448 chrX 14396822 14396864 chrX 14396924 14396950 4 92 3.0 1.0 2.0 1.3 128 chrX 14396822 intron dpr8 + chrX 14396886 intron dpr8 + chrX 14396950 intron dpr8 + chrX_4_14395001 chrX_14395001 RAL-531 2449 chrX 14404995 14405021 chrX 14405093 14405119 4 98 4.5 2.0 3.2 1.0 124 chrX 14404995 intron dpr8 + chrX 14405057 intron dpr8 + chrX 14405119 intron dpr8 + chrX_4_14405001 chrX_14405001 RAL-531 2450 chrX 14416294 14416320 chrX 14421072 14421106 F-element 9 4786 3.5 1.5 2.5 2.6 4812 chrX 14416294 intron dpr8 + chrX 14418700 intron dpr8 + chrX 14421106 intron dpr8 + chrX_9_14415001 chrX_14415001 RAL-531 2451 chrX 14448707 14448730 chrX 14448943 14448979 5 243 1.5 4.0 2.8 1.3 272 chrX 14448707 intron dpr8 + chrX 14448843 intron dpr8 + chrX 14448979 intron dpr8 + chrX_5_14445001 chrX_14445001 RAL-531 2452 chrX 14512133 14512154 chrX 14512215 14512223 4 76 3.5 2.0 2.8 1.1 90 chrX 14512133 intergenic not near genes chrX 14512178 intergenic not near genes chrX 14512223 intergenic not near genes chrX_4_14510001 chrX_14510001 RAL-531 2453 chrX 14560258 14560302 chrX 14560352 14560398 5 99 0.5 3.0 1.8 1.8 140 chrX 14560258 intergenic not near genes chrX 14560328 intergenic not near genes chrX 14560398 intergenic not near genes chrX_5_14560001 chrX_14560001 RAL-531 2454 chrX 14636458 14636491 chrX 14641905 14641915 I-element 7 5449 3.0 1.0 2.0 2.3 5457 chrX 14636458 intron NetA - chrX 14639186 intron NetA - chrX 14641915 intron NetA - chrX_7_14635001 chrX_14635001 RAL-531 2455 chrX 14778016 14778054 chrX 14782833 14782871 Doc 20 4817 5.5 7.0 6.2 2.8 4855 chrX 14778016 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_20_14780001 chrX_14780001 RAL-531 2456 chrX 14936840 14936888 chrX 14946117 14946165 roo 15 9277 4.5 6.0 5.2 2.4 9325 chrX 14936840 intron pdgy - chrX 14941502 intron pdgy - chrX 14946165 intron pdgy - chrX_15_14940001 chrX_14940001 RAL-531 2457 chrX 14968054 14968096 chrX 14968153 14968195 5 94 0.0 1.5 0.8 2.8 141 chrX 14968054 intron eag + chrX 14968124 intron eag + chrX 14968195 intron eag + chrX_5_14965001 chrX_14965001 RAL-531 2458 chrX 14981688 14981736 chrX 14981787 14981835 5 99 2.5 0.5 1.5 2.0 147 chrX 14981688 intron eag + chrX 14981762 intron eag + chrX 14981835 intron eag + chrX_5_14980001 chrX_14980001 RAL-531 2459 chrX 15059154 15059197 chrX 15059280 15059323 5 126 0.0 0.5 0.2 4.2 169 chrX 15059154 exon hiw - chrX 15059238 intron hiw - chrX 15059323 intron hiw - chrX_5_15055001 chrX_15055001 RAL-531 2460 chrX 15070162 15070358 chrX 15070275 15070463 11 113 0.0 0.0 0.0 11.0 301 chrX 15070162 3` UTR Lsd-2 - chrX 15070312 3` UTR Lsd-2 - chrX 15070463 3` UTR Lsd-2 - chrX_11_15070001 chrX_15070001 RAL-531 2461 chrX 15215460 15215482 chrX 15215604 15215626 4 144 1.5 1.0 1.2 1.8 166 chrX 15215460 intergenic not near genes chrX 15215543 intergenic not near genes chrX 15215626 intergenic not near genes chrX_4_15215001 chrX_15215001 RAL-531 2462 chrX 15248256 15248295 chrX 15248352 15248391 12 96 1.0 2.0 1.5 4.8 135 chrX 15248256 intergenic not near genes chrX 15248324 intergenic not near genes chrX 15248391 intergenic not near genes chrX_12_15245001 chrX_15245001 RAL-531 2463 chrX 15413059 15413080 chrX 15417352 15417370 Juan 5 4300 4.0 3.0 3.5 1.1 4311 chrX 15413059 intron Cngl - chrX 15415214 intron Cngl - chrX 15417370 intron Cngl - chrX_5_15415001 chrX_15415001 RAL-531 2464 chrX 15421909 15421942 chrX 15423435 15423469 pogo 7 1526 3.0 3.5 3.2 1.7 1560 chrX 15421909 intron Cngl - chrX 15422689 intron Cngl - chrX 15423469 intron Cngl - chrX_7_15420001 chrX_15420001 RAL-531 2465 chrX 15455531 15455567 chrX 15455628 15455664 9 96 3.5 3.5 3.5 2.0 133 chrX 15455531 3` UTR CG11655 + chrX 15455598 3` UTR shtd - chrX 15455664 3` UTR shtd - chrX_9_15455001 chrX_15455001 RAL-531 2466 chrX 15591196 15591204 chrX 15591247 15591251 5 77 0.0 1.5 0.8 2.8 55 chrX 15591196 intron CG9220 - chrX 15591224 intron CG9220 - chrX 15591251 intron CG9220 - chrX_5_15590001 chrX_15590001 RAL-531 2467 chrX 15633991 15634029 chrX 15634388 15634426 7 394 2.5 2.0 2.2 2.2 435 chrX 15633991 intergenic not near genes chrX 15634208 intergenic not near genes chrX 15634426 intergenic not near genes chrX_7_15630001 chrX_15630001 RAL-531 2468 chrX 15759486 15759537 chrX 15759582 15759633 15 94 4.5 3.0 3.8 3.1 147 chrX 15759486 intron Graf - chrX 15759560 intron Graf - chrX 15759633 intron Graf - chrX_15_15755001 chrX_15755001 RAL-531 2469 chrX 16222773 16222807 chrX 16231143 16231177 roo 13 8369 1.0 6.0 3.5 2.9 8404 chrX 16222773 intergenic not near genes chrX 16226975 intergenic not near genes chrX 16231177 intergenic not near genes chrX_13_16225001 chrX_16225001 RAL-531 2470 chrX 16295505 16295532 chrX 16295609 16295636 7 104 7.5 0.0 3.8 1.5 131 chrX 16295505 intron CG9911 - chrX 16295570 intron CG9911 - chrX 16295636 intron CG9911 - chrX_7_16295001 chrX_16295001 RAL-531 2471 chrX 16340651 16340693 chrX 16349826 16349865 roo 6 9176 0.0 6.5 3.2 1.4 9214 chrX 16340651 intergenic Dsp1 + chrX 16345258 intergenic not near genes chrX 16349865 intergenic sl + chrX_6_16345001 chrX_16345001 RAL-531 2472 chrX 16492625 16492679 chrX 16498222 16498276 mdg3 13 5596 2.0 3.0 2.5 3.7 5651 chrX 16492625 intron para - chrX 16495450 intron para - chrX 16498276 exon para - chrX_13_16495001 chrX_16495001 RAL-531 2473 chrX 16689604 16689631 chrX 16689709 16689714 4 97 2.5 1.5 2.0 1.3 110 chrX 16689604 intron Sep4 - chrX 16689659 intron Sep4 - chrX 16689714 intron Sep4 - chrX_4_16685001 chrX_16685001 RAL-531 2474 chrX 16690116 16690130 chrX 16690221 16690235 4 105 1.0 0.0 0.5 2.7 119 chrX 16690116 intron Sep4 - chrX 16690176 intron Sep4 - chrX 16690235 intron Sep4 - chrX_4_16690001 chrX_16690001 RAL-531 2475 chrX 16690436 16690472 chrX 16690532 16690562 5 90 3.5 1.5 2.5 1.4 126 chrX 16690436 intron Sep4 - chrX 16690499 intron Sep4 - chrX 16690562 intron Sep4 - chrX_5_16690001 chrX_16690001 RAL-531 2476 chrX 16700513 16700555 chrX 16700615 16700657 9 97 0.0 2.5 1.2 4.1 144 chrX 16700513 intron,3` UTR CG4678 +,spheroide - chrX 16700585 intron,3` UTR CG4678 +,spheroide - chrX 16700657 intron,3` UTR CG4678 +,spheroide - chrX_9_16700001 chrX_16700001 RAL-531 2477 chrX 16821231 16821260 chrX 16821318 16821360 5 97 3.0 5.0 4.0 1.0 129 chrX 16821231 intron CG4829 + chrX 16821296 intron CG4829 + chrX 16821360 intron CG4829 + chrX_5_16820001 chrX_16820001 RAL-531 2478 chrX 16839056 16839110 chrX 16839327 16839370 21 268 2.0 3.0 2.5 6.0 314 chrX 16839056 3` UTR RSG7 - chrX 16839213 3` UTR RSG7 - chrX 16839370 3` UTR RSG7 - chrX_21_16835001 chrX_16835001 RAL-531 2479 chrX 16870059 16870098 chrX 16870161 16870201 8 102 2.5 3.0 2.8 2.1 142 chrX 16870059 intron CG13003 - chrX 16870130 intron CG13003 - chrX 16870201 intron CG13003 - chrX_8_16870001 chrX_16870001 RAL-531 2480 chrX 16874022 16874037 chrX 16874118 16874133 9 95 4.5 2.0 3.2 2.1 111 chrX 16874022 intron CG13003 - chrX 16874078 intron CG13003 - chrX 16874133 intron CG13003 - chrX_9_16870001 chrX_16870001 RAL-531 2481 chrX 16935992 16936030 chrX 16936421 16936467 jockey 6 436 5.0 1.0 3.0 1.5 475 chrX 16935992 intron CG4928 + chrX 16936230 intron CG4928 + chrX 16936467 intron CG4928 + chrX_6_16935001 chrX_16935001 RAL-531 2482 chrX 17011972 17011999 chrX 17012062 17012071 6 79 1.5 3.5 2.5 1.7 99 chrX 17011972 intron CG45002 - chrX 17012022 intron CG45002 - chrX 17012071 intron CG45002 - chrX_6_17010001 chrX_17010001 RAL-531 2483 chrX 17057915 17057957 chrX 17058176 17058218 pogo 7 261 4.0 8.0 6.0 1.0 303 chrX 17057915 intron CG45002 - chrX 17058066 intron CG45002 - chrX 17058218 intron CG45002 - chrX_7_17055001 chrX_17055001 RAL-531 2484 chrX 17100152 17100199 chrX 17100284 17100331 9 132 1.0 2.5 1.8 3.2 179 chrX 17100152 intron CG4991 + chrX 17100242 intron CG4991 + chrX 17100331 intron CG4991 + chrX_9_17100001 chrX_17100001 RAL-531 2485 chrX 17195219 17195231 chrX 17200323 17200335 flea 5 5104 5.0 7.5 6.2 0.7 5116 chrX 17195219 3` UTR baz + chrX 17197777 3` UTR baz + chrX 17200335 3` UTR baz + chrX_5_17195001 chrX_17195001 RAL-531 2486 chrX 17205829 17205846 chrX 17205939 17205956 7 110 4.0 5.5 4.8 1.2 127 chrX 17205829 intergenic not near genes chrX 17205892 intergenic not near genes chrX 17205956 intergenic CG32564 + chrX_7_17205001 chrX_17205001 RAL-531 2487 chrX 17211438 17211470 chrX 17212125 17212153 6 688 12.0 18.5 15.2 0.4 715 chrX 17211438 intergenic not near genes chrX 17211796 intergenic not near genes chrX 17212153 intergenic CG18258 + chrX_6_17210001 chrX_17210001 RAL-531 2488 chrX 17229940 17229964 chrX 17230062 17230087 6 121 4.5 4.5 4.5 1.1 147 chrX 17229940 intergenic CG10597 - chrX 17230014 intergenic CG10597 - chrX 17230087 intergenic CG10597 - chrX_6_17230001 chrX_17230001 RAL-531 2489 chrX 17290043 17290090 chrX 17290139 17290186 14 95 4.5 3.5 4.0 2.8 143 chrX 17290043 intron,intron CG5445 +,Fim - chrX 17290114 intron,intron CG5445 +,Fim - chrX 17290186 intron,intron CG5445 +,Fim - chrX_14_17290001 chrX_17290001 RAL-531 2490 chrX 17316349 17316381 chrX 17316453 17316485 19 104 6.0 0.5 3.2 4.5 136 chrX 17316349 intron B-H2 + chrX 17316417 intron B-H2 + chrX 17316485 intron B-H2 + chrX_19_17315001 chrX_17315001 RAL-531 2491 chrX 17349851 17349880 chrX 17350063 17350092 10 212 2.5 1.0 1.8 3.6 241 chrX 17349851 intergenic not near genes chrX 17349972 intergenic not near genes chrX 17350092 intergenic not near genes chrX_10_17345001 chrX_17345001 RAL-531 2492 chrX 17364422 17364461 chrX 17364545 17364584 7 122 1.0 3.5 2.2 2.2 162 chrX 17364422 intergenic not near genes chrX 17364503 intergenic not near genes chrX 17364584 intergenic not near genes chrX_7_17360001 chrX_17360001 RAL-531 2493 chrX 17434408 17434444 chrX 17434521 17434557 9 113 4.0 0.0 2.0 3.0 149 chrX 17434408 intron CG12994 - chrX 17434482 intron CG12994 - chrX 17434557 intron CG12994 - chrX_9_17430001 chrX_17430001 RAL-531 2494 chrX 17502333 17502368 chrX 17502433 17502441 4 93 4.0 2.5 3.2 1.0 108 chrX 17502333 intron CG43658 - chrX 17502387 intron CG43658 - chrX 17502441 intron CG43658 - chrX_4_17500001 chrX_17500001 RAL-531 2495 chrX 17536820 17536873 chrX 17536925 17536964 5 101 0.0 1.0 0.5 3.3 144 chrX 17536820 intron CG43658 - chrX 17536892 intron CG43658 - chrX 17536964 intron CG43658 - chrX_5_17535001 chrX_17535001 RAL-531 2496 chrX 17711357 17711376 chrX 17711463 17711482 7 106 3.5 3.0 3.2 1.7 125 chrX 17711357 intron CG42684 + chrX 17711420 intron CG42684 + chrX 17711482 intron CG42684 + chrX_7_17710001 chrX_17710001 RAL-531 2497 chrX 17741321 17741371 chrX 17741483 17741536 5 165 0.0 5.5 2.8 1.3 215 chrX 17741321 intron CG42684 + chrX 17741428 intron CG42684 + chrX 17741536 intron CG42684 + chrX_5_17740001 chrX_17740001 RAL-531 2498 chrX 17766347 17766378 chrX 17766459 17766496 4 112 2.0 2.0 2.0 1.3 149 chrX 17766347 intergenic not near genes chrX 17766422 intergenic not near genes chrX 17766496 intergenic not near genes chrX_4_17765001 chrX_17765001 RAL-531 2499 chrX 17782227 17782241 chrX 17782345 17782359 6 117 3.0 5.5 4.2 1.2 132 chrX 17782227 intergenic not near genes chrX 17782293 intergenic not near genes chrX 17782359 intergenic not near genes chrX_6_17780001 chrX_17780001 RAL-531 2500 chrX 17784461 17784480 chrX 17784557 17784576 8 96 0.0 5.5 2.8 2.1 115 chrX 17784461 intergenic not near genes chrX 17784518 intergenic not near genes chrX 17784576 intergenic not near genes chrX_8_17780001 chrX_17780001 RAL-531 2501 chrX 17965693 17965737 chrX 17965790 17965834 11 97 4.0 0.5 2.2 3.4 141 chrX 17965693 intron Sh - chrX 17965764 intron Sh - chrX 17965834 intron Sh - chrX_11_17965001 chrX_17965001 RAL-531 2502 chrX 18320475 18320501 chrX 18320627 18320653 7 151 2.5 4.0 3.2 1.7 178 chrX 18320475 intron CG6023 - chrX 18320564 intron CG6023 - chrX 18320653 intron CG6023 - chrX_7_18320001 chrX_18320001 RAL-531 2503 chrX 18429486 18429515 chrX 18434817 18434846 Transpac 6 5330 5.0 7.0 6.0 0.9 5360 chrX 18429486 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434846 intergenic not near genes chrX_6_18430001 chrX_18430001 RAL-531 2504 chrX 18529390 18529399 chrX 18529486 18529495 4 96 2.5 11.5 7.0 0.5 105 chrX 18529390 intron,3` UTR Bx +,CG15047 + chrX 18529442 intron,3` UTR Bx +,CG15047 + chrX 18529495 intron,3` UTR Bx +,CG15047 + chrX_4_18525001 chrX_18525001 RAL-531 2505 chrX 18558775 18558808 chrX 18558877 18558910 6 102 1.0 4.5 2.8 1.6 135 chrX 18558775 intron Bx + chrX 18558842 intron Bx + chrX 18558910 intron Bx + chrX_6_18555001 chrX_18555001 RAL-531 2506 chrX 12946235 12946235 chrX 18572525 18572525 7 5626290 28.5 15.0 21.8 0.3 5626290 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_7_15755001 chrX_15755001 RAL-531 2507 chrX 18644996 18645046 chrX 18645114 18645164 14 116 2.5 2.0 2.2 4.4 168 chrX 18644996 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645164 intron Rip11 - chrX_14_18645001 chrX_18645001 RAL-531 2508 chrX 18698827 18698877 chrX 18698964 18699014 10 137 5.0 3.0 4.0 2.0 187 chrX 18698827 intergenic not near genes chrX 18698920 intergenic not near genes chrX 18699014 intergenic not near genes chrX_10_18695001 chrX_18695001 RAL-531 2509 chrX 18749857 18749898 chrX 18749957 18749976 12 99 4.5 5.0 4.8 2.1 119 chrX 18749857 intergenic not near genes chrX 18749916 intergenic not near genes chrX 18749976 intergenic not near genes chrX_12_18745001 chrX_18745001 RAL-531 2510 chrX 18861981 18862023 chrX 18862135 18862177 5 153 4.0 1.0 2.5 1.4 196 chrX 18861981 3` UTR CG7326 - chrX 18862079 3` UTR CG7326 - chrX 18862177 3` UTR CG7326 - chrX_5_18860001 chrX_18860001 RAL-531 2511 chrX 18896497 18896547 chrX 18896628 18896678 11 131 5.5 1.5 3.5 2.4 181 chrX 18896497 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896678 intergenic CG7349 + chrX_11_18895001 chrX_18895001 RAL-531 2512 chrX 18926523 18926544 chrX 18926635 18926647 7 108 1.5 0.0 0.8 3.9 124 chrX 18926523 intergenic not near genes chrX 18926585 intergenic not near genes chrX 18926647 intergenic not near genes chrX_7_18925001 chrX_18925001 RAL-531 2513 chrX 18947485 18947531 chrX 18947598 18947644 7 112 5.0 2.5 3.8 1.5 159 chrX 18947485 intron CG43759 + chrX 18947564 intron CG43759 + chrX 18947644 intron CG43759 + chrX_7_18945001 chrX_18945001 RAL-531 2514 chrX 18957055 18957076 chrX 18965731 18965751 roo 7 8675 2.0 0.0 1.0 3.5 8696 chrX 18957055 intron CG43759 + chrX 18961403 intron CG43759 + chrX 18965751 intron CG43759 + chrX_7_18960001 chrX_18960001 RAL-531 2515 chrX 19060392 19060439 chrX 19065196 19065243 Doc 15 4804 2.5 2.5 2.5 4.3 4851 chrX 19060392 intron CG14190 + chrX 19062818 intron CG14190 + chrX 19065243 intron CG14190 + chrX_15_19060001 chrX_19060001 RAL-531 2516 chrX 19098761 19098778 chrX 19098859 19098876 5 98 6.0 2.5 4.2 1.0 115 chrX 19098761 intergenic not near genes chrX 19098818 intergenic not near genes chrX 19098876 intergenic not near genes chrX_5_19095001 chrX_19095001 RAL-531 2517 chrX 19101193 19101206 chrX 19101328 19101341 4 134 0.0 0.0 0.0 4.0 148 chrX 19101193 intergenic not near genes chrX 19101267 intergenic not near genes chrX 19101341 intergenic not near genes chrX_4_19100001 chrX_19100001 RAL-531 2518 chrX 19119679 19119718 chrX 19119785 19119824 9 106 3.5 0.0 1.8 3.2 145 chrX 19119679 intergenic not near genes chrX 19119752 intergenic not near genes chrX 19119824 intergenic not near genes chrX_9_19115001 chrX_19115001 RAL-531 2519 chrX 19124430 19124459 chrX 19124538 19124568 4 100 1.0 6.0 3.5 0.9 138 chrX 19124430 intergenic CG15882 - chrX 19124499 intergenic CG15882 - chrX 19124568 intergenic CG15882 -,tgy - chrX_4_19120001 chrX_19120001 RAL-531 2520 chrX 19125672 19125706 chrX 19125821 19125855 5 149 3.0 3.5 3.2 1.2 183 chrX 19125672 intron tgy - chrX 19125764 intron tgy - chrX 19125855 intron tgy - chrX_5_19125001 chrX_19125001 RAL-531 2521 chrX 19136565 19136582 chrX 19143480 19143521 412 4 6928 0.0 3.0 1.5 1.6 6956 chrX 19136565 intergenic not near genes chrX 19140043 intergenic not near genes chrX 19143521 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-531 2522 chrX 19227298 19227332 chrX 19227418 19227452 5 120 0.0 3.5 1.8 1.8 154 chrX 19227298 intron CG7884 + chrX 19227375 intron CG7884 + chrX 19227452 intron CG7884 + chrX_5_19225001 chrX_19225001 RAL-531 2523 chrX 19249625 19249655 chrX 19256393 19256410 8 6760 8.5 5.0 6.8 1.0 6785 chrX 19249625 intron Hs3st-B + chrX 19253018 exon rictor - chrX 19256410 exon rictor - chrX_8_19250001 chrX_19250001 RAL-531 2524 chrX 19329988 19330032 chrX 19330079 19330090 7 90 3.0 3.0 3.0 1.8 102 chrX 19329988 intron nAChRalpha7 - chrX 19330039 intron nAChRalpha7 - chrX 19330090 intron nAChRalpha7 - chrX_7_19330001 chrX_19330001 RAL-531 2525 chrX 19339736 19339762 chrX 19339832 19339858 7 96 0.0 7.0 3.5 1.6 122 chrX 19339736 intron nAChRalpha7 - chrX 19339797 intron nAChRalpha7 - chrX 19339858 intron nAChRalpha7 - chrX_7_19335001 chrX_19335001 RAL-531 2526 chrX 19356970 19357019 chrX 19358431 19358498 NOF 15 1462 4.5 0.5 2.5 4.3 1528 chrX 19356970 intron kek5 + chrX 19357734 intron kek5 + chrX 19358498 intron kek5 + chrX_15_19355001 chrX_19355001 RAL-531 2527 chrX 19380150 19380185 chrX 19380396 19380446 pogo 16 258 4.0 2.5 3.2 3.8 296 chrX 19380150 intron kek5 + chrX 19380298 intron kek5 + chrX 19380446 intron kek5 + chrX_16_19380001 chrX_19380001 RAL-531 2528 chrX 19472121 19472157 chrX 19472691 19472711 jockey 6 572 1.5 3.0 2.2 1.9 590 chrX 19472121 intergenic kek5 + chrX 19472416 intergenic not near genes chrX 19472711 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-531 2529 chrX 19541416 19541446 chrX 19541510 19541541 12 98 3.5 3.0 3.2 2.9 125 chrX 19541416 intron CG32532 - chrX 19541478 intron CG32532 - chrX 19541541 intron CG32532 - chrX_12_19540001 chrX_19540001 RAL-531 2530 chrX 19560655 19560689 chrX 19560774 19560808 10 119 1.5 5.5 3.5 2.2 153 chrX 19560655 3` UTR Grip84 - chrX 19560732 3` UTR Grip84 - chrX 19560808 3` UTR Grip84 - chrX_10_19560001 chrX_19560001 RAL-531 2531 chrX 19576559 19576573 chrX 19576657 19576669 4 98 4.0 2.5 3.2 1.0 110 chrX 19576559 intron Tao - chrX 19576614 intron Tao - chrX 19576669 intron Tao - chrX_4_19575001 chrX_19575001 RAL-531 2532 chrX 19662011 19662045 chrX 19662253 19662256 8 236 5.5 5.0 5.2 1.3 245 chrX 19662011 intron CG14223 - chrX 19662134 intron CG14223 - chrX 19662256 intron CG14223 - chrX_8_19660001 chrX_19660001 RAL-531 2533 chrX 19710060 19710104 chrX 19711866 19711910 S-element 6 1802 4.5 1.5 3.0 1.5 1850 chrX 19710060 intron meso18E - chrX 19710985 intron meso18E - chrX 19711910 intron meso18E - chrX_6_19710001 chrX_19710001 RAL-531 2534 chrX 19817457 19817495 chrX 19817574 19817612 5 117 0.5 4.5 2.5 1.4 155 chrX 19817457 intergenic not near genes chrX 19817534 intergenic not near genes chrX 19817612 intergenic not near genes chrX_5_19815001 chrX_19815001 RAL-531 2535 chrX 19881434 19881481 chrX 19881535 19881582 13 97 4.5 3.0 3.8 2.7 148 chrX 19881434 intron Hers + chrX 19881508 intron Hers + chrX 19881582 intron Hers + chrX_13_19880001 chrX_19880001 RAL-531 2536 chrX 19983855 19983868 chrX 19983953 19983967 6 99 0.0 2.0 1.0 3.0 112 chrX 19983855 intergenic not near genes chrX 19983911 intergenic not near genes chrX 19983967 intergenic not near genes chrX_6_19980001 chrX_19980001 RAL-531 2537 chrX 19983873 19983887 chrX 19983952 19983987 4 87 0.0 2.0 1.0 2.0 114 chrX 19983873 intergenic not near genes chrX 19983930 intergenic not near genes chrX 19983987 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-531 2538 chrX 20065784 20065834 chrX 20065883 20065933 9 99 1.5 2.5 2.0 3.0 149 chrX 20065784 intergenic not near genes chrX 20065858 intergenic not near genes chrX 20065933 intergenic not near genes chrX_9_20065001 chrX_20065001 RAL-531 2539 chrX 20271482 20271525 chrX 20271594 20271637 8 107 1.0 0.0 0.5 5.3 155 chrX 20271482 intergenic not near genes chrX 20271560 intergenic not near genes chrX 20271637 intergenic not near genes chrX_8_20270001 chrX_20270001 RAL-531 2540 chrX 20279734 20279778 chrX 20279835 20279879 15 100 3.5 6.5 5.0 2.5 145 chrX 20279734 intergenic not near genes chrX 20279806 intergenic not near genes chrX 20279879 intergenic not near genes chrX_15_20275001 chrX_20275001 RAL-531 2541 chrX 20312871 20312902 chrX 20312969 20313000 5 94 2.0 2.5 2.2 1.6 129 chrX 20312871 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20313000 intron CG1504 - chrX_5_20310001 chrX_20310001 RAL-531 2542 chrX 20374073 20374115 chrX 20374169 20374211 4 93 0.5 1.5 1.0 2.0 138 chrX 20374073 intergenic not near genes chrX 20374142 intergenic not near genes chrX 20374211 intergenic not near genes chrX_4_20370001 chrX_20370001 RAL-531 2543 chrX 20385602 20385630 chrX 20385882 20385889 4 270 1.5 1.0 1.2 1.8 287 chrX 20385602 intergenic not near genes chrX 20385746 intergenic not near genes chrX 20385889 intergenic not near genes chrX_4_20385001 chrX_20385001 RAL-531 2544 chrX 20386808 20386847 chrX 20386914 20386914 11 100 2.0 2.0 2.0 3.7 106 chrX 20386808 intergenic not near genes chrX 20386861 intergenic not near genes chrX 20386914 intergenic not near genes chrX_11_20385001 chrX_20385001 RAL-531 2545 chrX 20415078 20415083 chrX 20415154 20415193 4 102 0.5 0.5 0.5 2.7 115 chrX 20415078 intergenic not near genes chrX 20415136 intergenic not near genes chrX 20415193 intergenic not near genes chrX_4_20415001 chrX_20415001 RAL-531 2546 chrX 20456637 20456660 chrX 20456759 20456782 10 118 8.0 3.5 5.8 1.5 145 chrX 20456637 intron CG32506 + chrX 20456710 intron CG32506 + chrX 20456782 intron CG32506 + chrX_10_20455001 chrX_20455001 RAL-531 2547 chrX 20456664 20456683 chrX 20456756 20456783 9 110 4.0 3.5 3.8 1.9 119 chrX 20456664 intron CG32506 + chrX 20456724 intron CG32506 + chrX 20456783 intron CG32506 + chrX_9_20455001 chrX_20455001 RAL-531 2548 chrX 20468001 20468042 chrX 20468110 20468111 9 104 3.5 0.0 1.8 3.2 110 chrX 20468001 intron GstT3 + chrX 20468056 intron GstT3 + chrX 20468111 intron GstT3 + chrX_9_20465001 chrX_20465001 RAL-531 2549 chrX 20484372 20484399 chrX 20484493 20484524 8 123 3.0 4.5 3.8 1.7 152 chrX 20484372 intron RhoGAP19D - chrX 20484448 intron RhoGAP19D - chrX 20484524 intron RhoGAP19D - chrX_8_20480001 chrX_20480001 RAL-531 2550 chrX 20504120 20504156 chrX 20505660 20505672 transib2 12 1535 2.5 2.0 2.2 3.8 1552 chrX 20504120 intron RhoGAP19D - chrX 20504896 intron RhoGAP19D - chrX 20505672 intron RhoGAP19D - chrX_12_20500001 chrX_20500001 RAL-531 2551 chrX 20528582 20528628 chrX 20528950 20528996 7 368 3.5 4.5 4.0 1.4 414 chrX 20528582 intergenic not near genes chrX 20528789 intergenic not near genes chrX 20528996 intergenic not near genes chrX_7_20525001 chrX_20525001 RAL-531 2552 chrX 20570747 20570799 chrX 20570852 20570889 8 98 1.5 5.0 3.2 1.9 142 chrX 20570747 intergenic not near genes chrX 20570818 intergenic not near genes chrX 20570889 intergenic not near genes chrX_8_20570001 chrX_20570001 RAL-531 2553 chrX 20575146 20575182 chrX 20575234 20575264 4 85 2.5 0.5 1.5 1.6 118 chrX 20575146 intergenic CG42580 + chrX 20575205 intergenic not near genes chrX 20575264 intergenic not near genes chrX_4_20575001 chrX_20575001 RAL-531 2554 chrX 20780215 20780238 chrX 20780459 20780480 6 244 1.5 4.0 2.8 1.6 265 chrX 20780215 intron,3` UTR shakB -,CG32507 - chrX 20780348 intron,3` UTR shakB -,CG32507 - chrX 20780480 intron,3` UTR shakB -,CG32507 - chrX_6_20780001 chrX_20780001 RAL-531 2555 chrX 20791553 20791815 chrX 20791672 20791911 4 108 1.5 1.5 1.5 1.6 358 chrX 20791553 intron shakB - chrX 20791732 intron shakB - chrX 20791911 intron shakB - chrX_4_20790001 chrX_20790001 RAL-531 2556 chrX 20836723 20836758 chrX 20844345 20844380 roo 4 7617 3.5 4.5 4.0 0.8 7657 chrX 20836723 intron shakB - chrX 20840552 intron shakB - chrX 20844380 intron shakB - chrX_4_20840001 chrX_20840001 RAL-531 2557 chrX 20915037 20915074 chrX 20915228 20915265 7 191 2.0 4.0 3.0 1.8 228 chrX 20915037 intron shakB - chrX 20915151 intron shakB - chrX 20915265 intron shakB - chrX_7_20915001 chrX_20915001 RAL-531 2558 chrX 20940703 20940745 chrX 20942192 20942225 hobo 8 1488 3.0 1.5 2.2 2.5 1522 chrX 20940703 intergenic not near genes chrX 20941464 intergenic not near genes chrX 20942225 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-531 2559 chrX 20947837 20947878 chrX 20947934 20947986 7 101 2.0 2.5 2.2 2.2 149 chrX 20947837 intergenic not near genes chrX 20947912 intergenic not near genes chrX 20947986 intergenic not near genes chrX_7_20945001 chrX_20945001 RAL-531 2560 chrX 20952028 20952067 chrX 20952132 20952171 8 103 3.0 8.0 5.5 1.2 143 chrX 20952028 intergenic not near genes chrX 20952100 intergenic not near genes chrX 20952171 intergenic not near genes chrX_8_20950001 chrX_20950001 RAL-531 2561 chrX 20956962 20957008 chrX 20962424 20962469 I-element 12 5460 2.5 2.5 2.5 3.4 5507 chrX 20956962 intergenic not near genes chrX 20959716 intergenic not near genes chrX 20962469 intergenic Ser6 - chrX_12_20955001 chrX_20955001 RAL-531 2562 chrX 20981004 20981035 chrX 20981127 20981158 8 123 7.0 0.5 3.8 1.7 154 chrX 20981004 intergenic not near genes chrX 20981081 intergenic not near genes chrX 20981158 intergenic not near genes chrX_8_20980001 chrX_20980001 RAL-531 2563 chrX 21029786 21029808 chrX 21029947 21029969 8 161 4.0 9.0 6.5 1.1 183 chrX 21029786 3` UTR CG1529 - chrX 21029878 3` UTR CG1529 - chrX 21029969 3` UTR CG1529 - chrX_8_21025001 chrX_21025001 RAL-531 2564 chrX 21076325 21076353 chrX 21076424 21076448 6 97 3.0 2.0 2.5 1.7 123 chrX 21076325 intron bves + chrX 21076386 intron bves + chrX 21076448 intron bves + chrX_6_21075001 chrX_21075001 RAL-531 2565 chrX 21086119 21086162 chrX 21087160 21087201 jockey 11 1047 2.5 5.5 4.0 2.2 1082 chrX 21086119 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087201 intergenic not near genes chrX_11_21085001 chrX_21085001 RAL-531 2566 chrX 21088024 21088073 chrX 21088176 21088225 4 146 3.0 0.5 1.8 1.4 201 chrX 21088024 intergenic not near genes chrX 21088124 intergenic not near genes chrX 21088225 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-531 2567 chrX 21197054 21197078 chrX 21197145 21197170 4 94 2.5 4.5 3.5 0.9 116 chrX 21197054 intergenic not near genes chrX 21197112 intergenic not near genes chrX 21197170 intergenic not near genes chrX_4_21195001 chrX_21195001 RAL-531 2568 chrX 21258828 21258837 chrX 21258948 21258957 4 118 4.0 2.0 3.0 1.0 129 chrX 21258828 intron CG32521 - chrX 21258892 intron CG32521 - chrX 21258957 intron CG32521 - chrX_4_21255001 chrX_21255001 RAL-531 2569 chrX 21328101 21328137 chrX 21328232 21328268 12 130 3.0 3.0 3.0 3.0 167 chrX 21328101 3` UTR CG1486 + chrX 21328184 intergenic CG1486 +,tty - chrX 21328268 intergenic CG1486 +,tty - chrX_12_21325001 chrX_21325001 RAL-531 2570 chrX 21334329 21334370 chrX 21334454 21334495 11 124 1.0 3.5 2.2 3.4 166 chrX 21334329 intron tty - chrX 21334412 intron tty - chrX 21334495 intron tty - chrX_11_21330001 chrX_21330001 RAL-531 2571 chrX 21358063 21358076 chrX 21358162 21358176 6 100 6.0 1.5 3.8 1.2 113 chrX 21358063 intergenic sol +,Sep1 + chrX 21358120 intergenic Sep1 +,sol + chrX 21358176 intergenic Sep1 +,sol + chrX_6_21355001 chrX_21355001 RAL-531 2572 chrX 21439518 21439566 chrX 21439619 21439667 10 101 3.5 3.5 3.5 2.2 149 chrX 21439518 intron CG42343 - chrX 21439592 intron CG42343 - chrX 21439667 intron CG42343 - chrX_10_21435001 chrX_21435001 RAL-531 2573 chrX 21458673 21458721 chrX 21464129 21464160 Ivk 11 5454 5.5 6.5 6.0 1.6 5487 chrX 21458673 intergenic not near genes chrX 21461416 intergenic not near genes chrX 21464160 intergenic not near genes chrX_11_21460001 chrX_21460001 RAL-531 2574 chrX 21467007 21467036 chrX 21467111 21467140 8 102 2.5 2.0 2.2 2.5 133 chrX 21467007 intergenic CR45507 - chrX 21467074 intergenic CR45507 - chrX 21467140 3` UTR CR45507 - chrX_8_21465001 chrX_21465001 RAL-531 2575 chrX 21474394 21474435 chrX 21474779 21474821 1731 8 386 4.0 1.5 2.8 2.1 427 chrX 21474394 intergenic not near genes chrX 21474608 intergenic not near genes chrX 21474821 intergenic not near genes chrX_8_21470001 chrX_21470001 RAL-531 2576 chrX 21581534 21581573 chrX 21581635 21581670 10 97 1.0 0.0 0.5 6.7 136 chrX 21581534 intergenic not near genes chrX 21581602 intergenic not near genes chrX 21581670 intergenic not near genes chrX_10_21580001 chrX_21580001 RAL-531 2577 chrX 21668245 21668284 chrX 21668349 21668389 11 103 6.5 2.0 4.2 2.1 144 chrX 21668245 intergenic not near genes chrX 21668317 intergenic not near genes chrX 21668389 intergenic not near genes chrX_11_21665001 chrX_21665001 RAL-531 2578 chrX 22448250 22448253 chrX 22448409 22448412 5 159 2.5 1.5 2.0 1.7 162 chrX 22448250 intron CG14615 - chrX 22448331 intron CG14615 - chrX 22448412 intron CG14615 - chrX_5_22445001 chrX_22445001 RAL-531 2579 chrX 22448254 22448295 chrX 22448408 22448454 11 156 2.0 1.5 1.8 3.9 200 chrX 22448254 intron CG14615 - chrX 22448354 intron CG14615 - chrX 22448454 intron CG14615 - chrX_11_22445001 chrX_22445001 RAL-531 2580 chrX 22478870 22478898 chrX 22479023 22479051 8 152 0.0 1.5 0.8 4.4 181 chrX 22478870 intron CG12576 - chrX 22478960 intron CG12576 - chrX 22479051 intron CG12576 - chrX_8_22475001 chrX_22475001 RAL-531 2581 chrX 22544419 22544444 chrX 22544519 22544544 5 100 1.0 1.5 1.2 2.3 125 chrX 22544419 intergenic CG17599 - chrX 22544482 intergenic CG17599 - chrX 22544544 intergenic CG17599 - chrX_5_22540001 chrX_22540001 RAL-531 2582 chrX 22646516 22646526 chrX 22646637 22646646 4 120 2.5 0.5 1.5 1.6 130 chrX 22646516 intergenic not near genes chrX 22646581 intergenic not near genes chrX 22646646 intergenic not near genes chrX_4_22645001 chrX_22645001 RAL-531 2583 chrX 22660552 22660593 chrX 22660656 22660697 11 102 4.5 4.5 4.5 2.0 145 chrX 22660552 intron CR44997 + chrX 22660624 intron CR44997 + chrX 22660697 intron CR44997 + chrX_11_22660001 chrX_22660001 RAL-531 2584 chrX 22697481 22697528 chrX 22701798 22701819 Juan 8 4314 1.5 3.5 2.5 2.3 4338 chrX 22697481 intron CR44997 + chrX 22699650 intron CR44997 + chrX 22701819 intron CR44997 + chrX_8_22695001 chrX_22695001 RAL-531 2585 chrX 22764363 22764398 chrX 22764479 22764514 9 116 3.0 3.5 3.2 2.1 151 chrX 22764363 intron CR44997 + chrX 22764438 intron CR44997 + chrX 22764514 intron CR44997 + chrX_9_22760001 chrX_22760001 RAL-531 2586 chrX 22771495 22771539 chrX 22774806 22774844 297 6 3304 2.5 2.5 2.5 1.7 3349 chrX 22771495 intron CR44997 + chrX 22773170 intron CR44997 + chrX 22774844 intron CR44997 + chrX_6_22770001 chrX_22770001 RAL-531 2587 chrX 22820947 22820982 chrX 22821153 22821190 7 205 1.0 5.0 3.0 1.8 243 chrX 22820947 intergenic not near genes chrX 22821068 intergenic not near genes chrX 22821190 intergenic not near genes chrX_7_22820001 chrX_22820001 RAL-531 2588 chrX 22844520 22844527 chrX 22844627 22844634 6 107 1.5 3.0 2.2 1.9 114 chrX 22844520 intron,intron fog -,CG42346 + chrX 22844577 intron,intron fog -,CG42346 + chrX 22844634 intron,intron fog -,CG42346 + chrX_6_22840001 chrX_22840001 RAL-531 2589 chrX 22862385 22862386 chrX 22862699 22862706 4 318 16.0 3.5 9.8 0.4 321 chrX 22862385 intron CG42346 + chrX 22862546 intron CG42346 + chrX 22862706 intron CG42346 + chrX_4_22860001 chrX_22860001 RAL-531 2590 chrX 22922511 22922529 chrX 22922611 22922625 8 96 3.0 3.5 3.2 1.9 114 chrX 22922511 intergenic not near genes chrX 22922568 intergenic not near genes chrX 22922625 intergenic not near genes chrX_8_22920001 chrX_22920001 RAL-531 2591 chrX 22987088 22987136 chrX 22989767 22989812 Burdock 9 2674 4.0 4.0 4.0 1.8 2724 chrX 22987088 intron,intron stnA -,stnB - chrX 22988450 intron,intron stnA -,stnB - chrX 22989812 intron,intron stnA -,stnB - chrX_9_22985001 chrX_22985001 RAL-531 2592 chrX 22996303 22996336 chrX 23003542 23003590 roo 10 7251 2.5 4.0 3.2 2.4 7287 chrX 22996303 intron,intron stnA -,stnB - chrX 22999946 intron,intron stnA -,stnB - chrX 23003590 intron,intron stnA -,stnB - chrX_10_22995001 chrX_22995001 RAL-531 2593 chrY 975608 975817 chrY 975730 975919 4 119 45.5 58.0 51.8 0.1 311 chrY 975608 intergenic not near genes chrY 975764 intergenic not near genes chrY 975919 intergenic not near genes chrY_4_975001 chrY_975001 RAL-531 2594 chrY 1419895 1419917 chrY 1420161 1420191 6 268 10.5 13.5 12.0 0.5 296 chrY 1419895 intergenic not near genes chrY 1420043 intergenic not near genes chrY 1420191 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-531 2595 chrY 1420640 1420644 chrY 1420736 1420739 4 96 10.0 14.0 12.0 0.3 99 chrY 1420640 intergenic not near genes chrY 1420690 intergenic not near genes chrY 1420739 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-531 2596 chrY 1420500 1420650 chrY 1420760 1420776 5 153 10.0 12.5 11.2 0.4 276 chrY 1420500 intergenic not near genes chrY 1420638 intergenic not near genes chrY 1420776 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-531 2597 chrY 2447720 2447736 chrY 2448315 2448331 opus 4 595 1.0 0.5 0.8 2.2 611 chrY 2447720 intergenic not near genes chrY 2448026 intergenic not near genes chrY 2448331 intergenic not near genes chrY_4_2445001 chrY_2445001 RAL-531